From 6208a9a8fa31b6f84345099a158fdd0ea90ec838 Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 14 Aug 2024 17:14:23 -0700 Subject: [PATCH 01/70] add save_genomes function --- GenomeFileUtil.spec | 19 + RELEASE_NOTES.md | 2 + lib/GenomeFileUtil/GenomeFileUtilImpl.py | 438 ++++++++++++++++++++- lib/GenomeFileUtil/GenomeFileUtilServer.py | 4 + lib/GenomeFileUtil/core/GenbankToGenome.py | 13 +- lib/GenomeFileUtil/core/GenomeInterface.py | 202 +++++++--- lib/GenomeFileUtil/core/MiscUtils.py | 26 ++ test/problematic_tests/save_genome_test.py | 2 +- 8 files changed, 637 insertions(+), 69 deletions(-) diff --git a/GenomeFileUtil.spec b/GenomeFileUtil.spec index 05cca1f9..5c06cff1 100644 --- a/GenomeFileUtil.spec +++ b/GenomeFileUtil.spec @@ -332,6 +332,25 @@ module GenomeFileUtil { funcdef save_one_genome(SaveOneGenomeParams params) returns (SaveGenomeResult returnVal) authentication required; + typedef structure { + string name; + KBaseGenomes.Genome data; + boolean hidden; + boolean upgrade; + } GenomeInput; + + typedef structure { + int workspace_id; + list inputs; + } SaveGenomesParams; + + typedef structure { + list results; + } SaveGenomesResults; + + funcdef save_genomes(SaveGenomesParams params) + returns(SaveGenomesResults results) authentication required; + /* gff_file - object containing path to gff_file ws_ref - input Assembly or Genome reference diff --git a/RELEASE_NOTES.md b/RELEASE_NOTES.md index c020b8f0..260b4aa4 100644 --- a/RELEASE_NOTES.md +++ b/RELEASE_NOTES.md @@ -6,6 +6,8 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). ## [0.11.7] - TBD +- The `save_genomes` method was added to allow users to save genmes in batch +- Parsed and validated genome before upload - Unusable `export_genome_features_protein_to_fasta` function was removed - The `genbanks_to_genomes` method was added to allow users to upload multiple genome objects at once diff --git a/lib/GenomeFileUtil/GenomeFileUtilImpl.py b/lib/GenomeFileUtil/GenomeFileUtilImpl.py index 0d01dd6e..98543d35 100644 --- a/lib/GenomeFileUtil/GenomeFileUtilImpl.py +++ b/lib/GenomeFileUtil/GenomeFileUtilImpl.py @@ -69,7 +69,7 @@ class GenomeFileUtil: ######################################### noqa VERSION = "0.11.7" GIT_URL = "git@github.com:kbaseapps/GenomeFileUtil.git" - GIT_COMMIT_HASH = "591a19ccf4d1b42f01cc06486654b6d3a8ea08e4" + GIT_COMMIT_HASH = "4819598e65eea38d3c38d8c2ab808aca0d9697fd" #BEGIN_CLASS_HEADER #END_CLASS_HEADER @@ -1262,6 +1262,442 @@ def save_one_genome(self, ctx, params): # return the results return [returnVal] + def save_genomes(self, ctx, params): + """ + :param params: instance of type "SaveGenomesParams" -> structure: + parameter "workspace_id" of Long, parameter "inputs" of list of + type "GenomeInput" -> structure: parameter "name" of String, + parameter "data" of type "Genome" (Genome type -- annotated and + assembled genome data. Field descriptions: id - string - KBase + legacy data ID scientific_name - string - human readable species + name domain - string - human readable phylogenetic domain name + (eg. "Bacteria") warnings - list of string - genome-level warnings + generated in the annotation process genome_tiers - list of string + - controlled vocabulary (based on app input and checked by + GenomeFileUtil) A list of labels describing the data source for + this genome. Allowed values - Representative, Reference, + ExternalDB, User Tier assignments based on genome source: * All + phytozome - Representative and ExternalDB * Phytozome flagship + genomes - Reference, Representative and ExternalDB * Ensembl - + Representative and ExternalDB * RefSeq Reference - Reference, + Representative and ExternalDB * RefSeq Representative - + Representative and ExternalDB * RefSeq Latest or All Assemblies + folder - ExternalDB * User Data - User tagged feature_counts - map + of string to integer - total counts of each type of feature keys + are a controlled vocabulary of - "CDS", "gene", "misc_feature", + "misc_recomb", "mobile_element", "ncRNA" - 72, + "non_coding_features", "non_coding_genes", + "protein_encoding_gene", "rRNA", "rep_origin", "repeat_region", + "tRNA" genetic_code - int - An NCBI-assigned taxonomic category + for the organism See here - + https://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi dna_size + - integer - total number of nucleotides num_contigs - integer - + total number of contigs in the genome molecule_type - string - + controlled vocab - the type of molecule sequenced Possible values + are "Unknown", "DNA", "RNA", "genomic DNA", "genomic RNA", "mRNA", + "tRNA", "rRNA", "other RNA", "other DNA", "transcribed RNA", + "viral cRNA", "unassigned DNA", "unassigned RNA" contig_lengths - + list of int - nucleotide length of each contig in the genome + Indexes in this list correspond to indexes in the `contig_ids` + list. contig_ids - list of str - external database identifiers for + each contig (eg. "NC_000913.3") source - str - controlled vocab - + descriptor of where this data came from (eg. "RefSeq") Allowed + entries RefSeq, Ensembl, Phytozome, RAST, Prokka, User_upload + source_id - string - identifier of this genome from the source + database (eg. the RefSeq ID such as "NC_000913") md5 - string - + checksum of the underlying assembly sequence taxonomy - string - + semicolon-delimited taxonomy lineage, in order of parent to child + taxon_assignments - mapping of taxonomy namespace to taxon ID. + example - {"ncbi": "286", "gtdb": "s__staphylococcus_devriesei"} + gc_content - float - ratio of GC count to AT in the genome + publications - tuple of (pubmedid, source, title, web_addr, year, + authors, journal). See typedef above. ontology_events - A record + of the service and method used for a set of ontology assignments + on the genome. ontologies_present - a mapping of ontology source + id (eg. "GO") to a mapping of term IDs (eg "GO:16209") to term + names (eg. "histidine biosynthetic process"). features - array of + Feature - protein coding genes (see the separate Feature spec) + cdss - array of protein-coding sequences mrnas - array of + transcribed messenger RNA sequences (equal to cdss plus 5' and 3' + UTRs) non_coding_features - array of features that does not + include mRNA, CDS, and protein-encoding genes assembly_ref - + workspace reference to an assembly object from which this + annotated genome was derived. taxon_ref - workspace reference to a + taxon object that classifies the species or strain of this genome. + genbank_handle_ref - file server handle reference to the source + genbank file for this genome. gff_handle_ref - file server handle + reference to the source GFF file for this genome. + external_source_origination_date - TODO look at GFU for this + release - string - User-supplied release or version of the source + data. This most likely will come from an input field in the import + app. original_source_file_name - filename from which this genome + was derived (eg. genbank or gff filename). notes - TODO + quality_scores - TODO suspect - bool - flag of whether this + annotation is problematic due to some warning genome_type - string + - controlled vocab - One of "draft isolate", "finished isolate", + "mag", "sag", "virus", "plasmid", "construct" Features vs. coding + sequences: a feature is a sequence in the DNA that codes for a + protein, including non-transcribed introns. A coding sequence + (stored as `cdss`) includes **only** the sections of the feature + that codes for a protein, minus introns and UTRs. @optional + warnings contig_lengths contig_ids source_id taxonomy publications + @optional ontology_events ontologies_present non_coding_features + mrnas genome_type @optional genbank_handle_ref gff_handle_ref + external_source_origination_date @optional release + original_source_file_name notes quality_scores suspect + assembly_ref @optional taxon_ref taxon_assignments @metadata ws + gc_content as GC content @metadata ws taxonomy as Taxonomy + @metadata ws md5 as MD5 @metadata ws dna_size as Size @metadata ws + genetic_code as Genetic code @metadata ws domain as Domain + @metadata ws source_id as Source ID @metadata ws source as Source + @metadata ws scientific_name as Name @metadata ws genome_type as + Type @metadata ws length(features) as Number of Protein Encoding + Genes @metadata ws length(cdss) as Number of CDS @metadata ws + assembly_ref as Assembly Object @metadata ws num_contigs as Number + contigs @metadata ws length(warnings) as Number of Genome Level + Warnings @metadata ws suspect as Suspect Genome) -> structure: + parameter "id" of type "Genome_id" (KBase legacy data ID @id kb), + parameter "scientific_name" of String, parameter "domain" of + String, parameter "warnings" of list of String, parameter + "genome_tiers" of list of String, parameter "feature_counts" of + mapping from String to Long, parameter "genetic_code" of Long, + parameter "dna_size" of Long, parameter "num_contigs" of Long, + parameter "molecule_type" of String, parameter "contig_lengths" of + list of Long, parameter "contig_ids" of list of String, parameter + "source" of String, parameter "source_id" of type "source_id" + (Reference to a source_id @id external), parameter "md5" of + String, parameter "taxonomy" of String, parameter + "taxon_assignments" of mapping from String to String, parameter + "gc_content" of Double, parameter "publications" of list of type + "publication" (Structure for a publication Elements: (0) pubmedid + - float (1) source - string - (ex. Pubmed) (2) title - string (3) + string web address - string (4) publication year - string (5) + authors - string (6) journal - string) -> tuple of size 7: + parameter "pubmedid" of Double, parameter "source" of String, + parameter "title" of String, parameter "url" of String, parameter + "year" of String, parameter "authors" of String, parameter + "journal" of String, parameter "ontology_events" of list of type + "Ontology_event" (@optional ontology_ref method_version eco) -> + structure: parameter "id" of String, parameter "ontology_ref" of + type "Ontology_ref" (Reference to a ontology object @id ws + KBaseOntology.OntologyDictionary), parameter "method" of String, + parameter "method_version" of String, parameter "timestamp" of + String, parameter "eco" of String, parameter "ontologies_present" + of mapping from String to mapping from String to String, parameter + "features" of list of type "Feature" (Structure for a single CDS + encoding "gene" of a genome ONLY PUT GENES THAT HAVE A + CORRESPONDING CDS IN THIS ARRAY NOTE: Sequence is optional. + Ideally we can keep it in here, but Recognize due to space + constraints another solution may be needed. We may want to add + additional fields for other CDM functions (e.g., atomic regulons, + coexpressed fids, co_occurring fids,...) + protein_translation_length and protein_translation are for longest + coded protein (representative protein for splice variants) NOTE: + New Aliases field definitely breaks compatibility. As Does + Function. flags are flag fields in GenBank format. This will be a + controlled vocabulary. Initially Acceptable values are pseudo, + ribosomal_slippage, and trans_splicing Md5 is the md5 of + dna_sequence. @optional functions ontology_terms note + protein_translation mrnas flags warnings @optional inference_data + dna_sequence aliases db_xrefs children functional_descriptions) -> + structure: parameter "id" of type "Feature_id" (KBase Feature ID + @id external), parameter "location" of list of tuple of size 4: + type "Contig_id" (ContigSet contig ID @id external), Long, String, + Long, parameter "functions" of list of String, parameter + "functional_descriptions" of list of String, parameter + "ontology_terms" of mapping from String to mapping from String to + list of Long, parameter "note" of String, parameter "md5" of + String, parameter "protein_translation" of String, parameter + "protein_translation_length" of Long, parameter "cdss" of list of + String, parameter "mrnas" of list of String, parameter "children" + of list of String, parameter "flags" of list of String, parameter + "warnings" of list of String, parameter "inference_data" of list + of type "InferenceInfo" (Type spec for the "InferenceInfo" object. + TODO docs Found in the `inference_data` fields in mRNAs and CDSs + Fields: category - string - TODO type - string - TODO evidence - + string - TODO) -> structure: parameter "category" of String, + parameter "type" of String, parameter "evidence" of String, + parameter "dna_sequence" of String, parameter + "dna_sequence_length" of Long, parameter "aliases" of list of + tuple of size 2: parameter "fieldname" of String, parameter + "alias" of String, parameter "db_xrefs" of list of tuple of size + 2: parameter "db_source" of String, parameter "db_identifier" of + String, parameter "non_coding_features" of list of type + "NonCodingFeature" (Structure for a single feature that is NOT one + of the following: - Protein encoding gene (gene that has a + corresponding CDS) - mRNA - CDS Note pseudo-genes and Non protein + encoding genes are put into this flags are flag fields in GenBank + format. This will be a controlled vocabulary. Initially Acceptable + values are pseudo, ribosomal_slippage, and trans_splicing Md5 is + the md5 of dna_sequence. @optional functions ontology_terms note + flags warnings functional_descriptions @optional inference_data + dna_sequence aliases db_xrefs children parent_gene) -> structure: + parameter "id" of type "Feature_id" (KBase Feature ID @id + external), parameter "location" of list of tuple of size 4: type + "Contig_id" (ContigSet contig ID @id external), Long, String, + Long, parameter "type" of String, parameter "functions" of list of + String, parameter "functional_descriptions" of list of String, + parameter "ontology_terms" of mapping from String to mapping from + String to list of Long, parameter "note" of String, parameter + "md5" of String, parameter "parent_gene" of String, parameter + "children" of list of String, parameter "flags" of list of String, + parameter "warnings" of list of String, parameter "inference_data" + of list of type "InferenceInfo" (Type spec for the "InferenceInfo" + object. TODO docs Found in the `inference_data` fields in mRNAs + and CDSs Fields: category - string - TODO type - string - TODO + evidence - string - TODO) -> structure: parameter "category" of + String, parameter "type" of String, parameter "evidence" of + String, parameter "dna_sequence" of String, parameter + "dna_sequence_length" of Long, parameter "aliases" of list of + tuple of size 2: parameter "fieldname" of String, parameter + "alias" of String, parameter "db_xrefs" of list of tuple of size + 2: parameter "db_source" of String, parameter "db_identifier" of + String, parameter "cdss" of list of type "CDS" (Structure for a + single coding sequence. Coding sequences are the sections of a + feature's sequence that are translated to a protein (minus introns + and UTRs). Fields: id - string - identifier of the coding + sequence, such as "b0001_CDS_1" location - list> - list of locations from where this sequence + originates in the original assembly. Each sub-sequence in the list + constitutes a section of the resulting CDS. The first element in + the tuple corresponds to the "contig_id", such as "NC_000913.3". + The second element in the tuple is an index in the contig of where + the sequence starts. The third element is either a plus or minus + sign indicating whether it is on the 5' to 3' leading strand ("+") + or on the 3' to 5' lagging strand ("-"). The last element is the + length of the sub-sequence. For a location on the leading strand + (denoted by "+"), the index is of the leftmost base, and the + sequence extends to the right. For a location on the lagging + strand (denoted by "-"), the index is of the rightmost base, and + the sequence extends to the left. NOTE: the last element in each + tuple is the *length* of each sub-sequence. If you have a location + such as ("xyz", 100, "+", 50), then your sequence will go from + index 100 to index 149 (this has a length of 50). It *does not* go + from index 100 to index 150, as that would have a length of 51. + Likewise, if you have the location ("xyz", 100, "-", 50), then the + sequence extends from 100 down to 51, which has a length of 50 + bases. It does not go from index 100 to 50, as that would have a + length of 51. md5 - string - md5 of the dna sequence - TODO + clarification protein_md5 - string - hash of the protein sequence + that this CDS encodes parent_gene - string - gene (feature) from + which this CDS comes from, including introns and UTRs that have + been removed to create this CDS. parent_mrna - string - mRNA + sequence from which this sequence is derived, including UTRs but + not introns. note - string - TODO functions - list - list + of protein products or chemical processes that this sequence + creates, facilitates, or influences. functional_descriptions - + list - TODO list of protein products or chemical processes + that sequence creates, facilitates, or influences. ontology_terms + - mapping>> - a mapping of + ontology source id (eg. "GO") to a mapping of term IDs (eg + "GO:16209") to a list of indexes into the ontology_events data + (found in the top level of the genome object). The index into an + ontology event indicates what service and method created this term + assignment. flags - list - (controlled vocab) fields from + the genbank source. A common example is "pseudo" for pseudo-genes + that do not encode proteins, which shows up as "/pseudo" in the + genbank. Values can be: "pseudo", "ribosomal_slippage", + "trans_splicing" warnings - list - TODO inference_data - + list - TODO protein_translation - string - amino + acid sequence that this CDS gets translated into. + protein_translation_length - int - length of the above aliases - + list<(string, string)> - alternative list of names or identifiers + eg: [["gene", "thrA"], ["locus_tag", "b0002"]] db_xrefs - + list<(string, string)> - Identifiers from other databases + (database cross-references) The first string is the database name, + the second is the database identifier. eg: [["ASAP", + "ABE-0000006"], ["EcoGene", "EG11277"]] dna_sequence - string - + sequence of exons from the genome that constitute this protein + encoding sequence. dna_sequence_length - int - length of the above + @optional parent_gene parent_mrna functions ontology_terms note + flags warnings @optional inference_data dna_sequence aliases + db_xrefs functional_descriptions) -> structure: parameter "id" of + type "cds_id" (KBase CDS ID @id external), parameter "location" of + list of tuple of size 4: type "Contig_id" (ContigSet contig ID @id + external), Long, String, Long, parameter "md5" of String, + parameter "protein_md5" of String, parameter "parent_gene" of type + "Feature_id" (KBase Feature ID @id external), parameter + "parent_mrna" of type "mrna_id" (KBase mRNA ID @id external), + parameter "note" of String, parameter "functions" of list of + String, parameter "functional_descriptions" of list of String, + parameter "ontology_terms" of mapping from String to mapping from + String to list of Long, parameter "flags" of list of String, + parameter "warnings" of list of String, parameter "inference_data" + of list of type "InferenceInfo" (Type spec for the "InferenceInfo" + object. TODO docs Found in the `inference_data` fields in mRNAs + and CDSs Fields: category - string - TODO type - string - TODO + evidence - string - TODO) -> structure: parameter "category" of + String, parameter "type" of String, parameter "evidence" of + String, parameter "protein_translation" of String, parameter + "protein_translation_length" of Long, parameter "aliases" of list + of tuple of size 2: parameter "fieldname" of String, parameter + "alias" of String, parameter "db_xrefs" of list of tuple of size + 2: parameter "db_source" of String, parameter "db_identifier" of + String, parameter "dna_sequence" of String, parameter + "dna_sequence_length" of Long, parameter "mrnas" of list of type + "mRNA" (The mRNA is the transcribed sequence from the original + feature, minus the introns, but including the UTRs. Fields: id - + string - identifying string for the mRNA location - + list> - list of locations from + where this sequence originates in the original assembly. Each + sub-sequence in the list constitutes a section of the resulting + CDS. The first element in the tuple corresponds to the + "contig_id", such as "NC_000913.3". The second element in the + tuple is an index in the contig of where the sequence starts. The + third element is either a plus or minus sign indicating whether it + is on the 5' to 3' leading strand ("+") or on the 3' to 5' lagging + strand ("-"). The last element is the length of the sub-sequence. + For a location on the leading strand (denoted by "+"), the index + is of the leftmost base, and the sequence extends to the right. + For a location on the lagging strand (denoted by "-"), the index + is of the rightmost base, and the sequence extends to the left. + NOTE: the last element in each tuple is the *length* of each + sub-sequence. If you have a location such as ("xyz", 100, "+", + 50), then your sequence will go from index 100 to index 149 (this + has a length of 50). It *does not* go from index 100 to index 150, + as that would have a length of 51. Likewise, if you have the + location ("xyz", 100, "-", 50), then the sequence extends from 100 + down to 51, which has a length of 50 bases. It does not go from + index 100 to 50, as that would have a length of 51. md5 - string - + md5 of the dna sequence - TODO clarification parent_gene - + Feature_id - corresponding feature for this sequence, including + introns and UTRs cds - string - corresponding coding sequence for + this mRNA (the sequence minus UTRs) dna_sequence - string - + sequence of UTRs and exons from the genome that constitute this + mRNA dna_sequence_length - int - length of the above note - string + - TODO functions - list - TODO list of protein products or + chemical processes that sequence creates, facilitates, or + influences. functional_descriptions - list - TODO list of + protein products or chemical processes that sequence creates, + facilitates, or influences. ontology_terms - mapping>> - a mapping of ontology source id (eg. + "GO") to a mapping of term IDs (eg "GO:16209") to a list of + indexes into the ontology_events data (found in the top level of + the genome object). The index into an ontology event indicates + what service and method created this term assignment. flags - + list - controlled vocab - fields from the genbank source. + A common example is "pseudo" for pseudo-genes that do not encode + proteins, which shows up as "/pseudo" in the genbank. Values can + be: "pseudo", "ribosomal_slippage", "trans_splicing" warnings - + list - TODO inference_data - list - TODO + aliases - list<(string, string)> - alternative list of names or + identifiers eg: [["gene", "thrA"], ["locus_tag", "b0002"]] + db_xrefs - list<(string, string)> - Identifiers from other + databases (database cross-references). The first string is the + database name, the second is the database identifier. eg: + [["ASAP", "ABE-0000006"], ["EcoGene", "EG11277"]] @optional + parent_gene cds functions ontology_terms note flags warnings + @optional inference_data dna_sequence aliases db_xrefs + functional_descriptions) -> structure: parameter "id" of type + "mrna_id" (KBase mRNA ID @id external), parameter "location" of + list of tuple of size 4: type "Contig_id" (ContigSet contig ID @id + external), Long, String, Long, parameter "md5" of String, + parameter "parent_gene" of type "Feature_id" (KBase Feature ID @id + external), parameter "cds" of type "cds_id" (KBase CDS ID @id + external), parameter "dna_sequence" of String, parameter + "dna_sequence_length" of Long, parameter "note" of String, + parameter "functions" of list of String, parameter + "functional_descriptions" of list of String, parameter + "ontology_terms" of mapping from String to mapping from String to + list of Long, parameter "flags" of list of String, parameter + "warnings" of list of String, parameter "inference_data" of list + of type "InferenceInfo" (Type spec for the "InferenceInfo" object. + TODO docs Found in the `inference_data` fields in mRNAs and CDSs + Fields: category - string - TODO type - string - TODO evidence - + string - TODO) -> structure: parameter "category" of String, + parameter "type" of String, parameter "evidence" of String, + parameter "aliases" of list of tuple of size 2: parameter + "fieldname" of String, parameter "alias" of String, parameter + "db_xrefs" of list of tuple of size 2: parameter "db_source" of + String, parameter "db_identifier" of String, parameter + "assembly_ref" of type "Assembly_ref" (Reference to an Assembly + object in the workspace @id ws KBaseGenomeAnnotations.Assembly), + parameter "taxon_ref" of type "Taxon_ref" (Reference to a taxon + object @id ws KBaseGenomeAnnotations.Taxon), parameter + "genbank_handle_ref" of type "genbank_handle_ref" (Reference to a + handle to the Genbank file on shock @id handle), parameter + "gff_handle_ref" of type "gff_handle_ref" (Reference to a handle + to the GFF file on shock @id handle), parameter + "external_source_origination_date" of String, parameter "release" + of String, parameter "original_source_file_name" of String, + parameter "notes" of String, parameter "quality_scores" of list of + type "GenomeQualityScore" (Genome quality score Fields: method - + string - TODO method_report_ref - string - TODO method_version - + string - TODO score: string - TODO score_interpretation - string - + TODO timestamp - string - TODO Score_interpretation - + fraction_complete - controlled vocabulary managed by API @optional + method_report_ref method_version) -> structure: parameter "method" + of String, parameter "method_report_ref" of type + "Method_report_ref" (Reference to a report object @id ws + KBaseReport.Report), parameter "method_version" of String, + parameter "score" of String, parameter "score_interpretation" of + String, parameter "timestamp" of String, parameter "suspect" of + type "Bool", parameter "genome_type" of String, parameter "hidden" + of type "boolean" (A boolean - 0 for false, 1 for true. @range (0, + 1)), parameter "upgrade" of type "boolean" (A boolean - 0 for + false, 1 for true. @range (0, 1)) + :returns: instance of type "SaveGenomesResults" -> structure: + parameter "results" of list of type "SaveGenomeResult" -> + structure: parameter "info" of type "object_info" (Information + about an object, including user provided metadata. obj_id objid - + the numerical id of the object. obj_name name - the name of the + object. type_string type - the type of the object. timestamp + save_date - the save date of the object. obj_ver ver - the version + of the object. username saved_by - the user that saved or copied + the object. ws_id wsid - the workspace containing the object. + ws_name workspace - the workspace containing the object. string + chsum - the md5 checksum of the object. int size - the size of the + object in bytes. usermeta meta - arbitrary user-supplied metadata + about the object.) -> tuple of size 11: parameter "objid" of type + "obj_id" (The unique, permanent numerical ID of an object.), + parameter "name" of type "obj_name" (A string used as a name for + an object. Any string consisting of alphanumeric characters and + the characters |._- that is not an integer is acceptable.), + parameter "type" of type "type_string" (A type string. Specifies + the type and its version in a single string in the format + [module].[typename]-[major].[minor]: module - a string. The module + name of the typespec containing the type. typename - a string. The + name of the type as assigned by the typedef statement. major - an + integer. The major version of the type. A change in the major + version implies the type has changed in a non-backwards compatible + way. minor - an integer. The minor version of the type. A change + in the minor version implies that the type has changed in a way + that is backwards compatible with previous type definitions. In + many cases, the major and minor versions are optional, and if not + provided the most recent version will be used. Example: + MyModule.MyType-3.1), parameter "save_date" of type "timestamp" (A + time in the format YYYY-MM-DDThh:mm:ssZ, where Z is either the + character Z (representing the UTC timezone) or the difference in + time to UTC in the format +/-HHMM, eg: 2012-12-17T23:24:06-0500 + (EST time) 2013-04-03T08:56:32+0000 (UTC time) + 2013-04-03T08:56:32Z (UTC time)), parameter "version" of Long, + parameter "saved_by" of type "username" (Login name of a KBase + user account.), parameter "wsid" of type "ws_id" (The unique, + permanent numerical ID of a workspace.), parameter "workspace" of + type "ws_name" (A string used as a name for a workspace. Any + string consisting of alphanumeric characters and "_", ".", or "-" + that is not an integer is acceptable. The name may optionally be + prefixed with the workspace owner's user name and a colon, e.g. + kbasetest:my_workspace.), parameter "chsum" of String, parameter + "size" of Long, parameter "meta" of type "usermeta" (User provided + metadata about an object. Arbitrary key-value pairs provided by + the user.) -> mapping from String to String + """ + # ctx is the context object + # return variables are: results + #BEGIN save_genomes + results = { + "results": GenomeInterface(self.cfg).save_genome_mass(params) + } + #END save_genomes + + # At some point might do deeper type checking... + if not isinstance(results, dict): + raise ValueError('Method save_genomes return value ' + + 'results is not type dict as required.') + # return the results + return [results] + def ws_obj_gff_to_genome(self, ctx, params): """ This function takes in a workspace object of type KBaseGenomes.Genome or KBaseGenomeAnnotations.Assembly and a gff file and produces a KBaseGenomes.Genome reanotated according to the the input gff file. diff --git a/lib/GenomeFileUtil/GenomeFileUtilServer.py b/lib/GenomeFileUtil/GenomeFileUtilServer.py index 6ae2c611..2c09c2e0 100644 --- a/lib/GenomeFileUtil/GenomeFileUtilServer.py +++ b/lib/GenomeFileUtil/GenomeFileUtilServer.py @@ -394,6 +394,10 @@ def __init__(self): name='GenomeFileUtil.save_one_genome', types=[dict]) self.method_authentication['GenomeFileUtil.save_one_genome'] = 'required' # noqa + self.rpc_service.add(impl_GenomeFileUtil.save_genomes, + name='GenomeFileUtil.save_genomes', + types=[dict]) + self.method_authentication['GenomeFileUtil.save_genomes'] = 'required' # noqa self.rpc_service.add(impl_GenomeFileUtil.ws_obj_gff_to_genome, name='GenomeFileUtil.ws_obj_gff_to_genome', types=[dict]) diff --git a/lib/GenomeFileUtil/core/GenbankToGenome.py b/lib/GenomeFileUtil/core/GenbankToGenome.py index d1851a61..8342e284 100644 --- a/lib/GenomeFileUtil/core/GenbankToGenome.py +++ b/lib/GenomeFileUtil/core/GenbankToGenome.py @@ -19,6 +19,7 @@ from installed_clients.AssemblyUtilClient import AssemblyUtil from installed_clients.DataFileUtilClient import DataFileUtil from GenomeFileUtil.core.GenomeInterface import GenomeInterface +from GenomeFileUtil.core.MiscUtils import get_int from installed_clients.WorkspaceClient import Workspace from GenomeFileUtil.core.GenomeUtils import ( is_parent, propagate_cds_props_to_gene, warnings, parse_inferences, @@ -125,7 +126,7 @@ def _set_up_single_params(self, params): # avoid side effects and keep variables in params unmodfied inputs = dict(params) self._validate_params(inputs) - ws_id = self._get_int(inputs.pop(_WSID, None), _WSID) + ws_id = get_int(inputs.pop(_WSID, None), _WSID) ws_name = inputs.pop(_WSNAME, None) if (bool(ws_id) == bool(ws_name)): # xnor raise ValueError(f"Exactly one of a '{_WSID}' or a '{_WSNAME}' parameter must be provided") @@ -137,7 +138,7 @@ def _set_up_single_params(self, params): return mass_params def _validate_mass_params(self, params): - ws_id = self._get_int(params.get(_WSID), _WSID) + ws_id = get_int(params.get(_WSID), _WSID) if not ws_id: raise ValueError(f"{_WSID} is required") inputs = params.get(_INPUTS) @@ -151,14 +152,6 @@ def _validate_mass_params(self, params): except Exception as e: raise ValueError(f"Entry #{i} in {_INPUTS} field has invalid params: {e}") from e - def _get_int(self, putative_int, name, minimum=1): - if putative_int is not None: - if type(putative_int) is not int: - raise ValueError(f"{name} must be an integer, got: {putative_int}") - if putative_int < minimum: - raise ValueError(f"{name} must be an integer >= {minimum}") - return putative_int - def _import_genbank_mass(self, params): workspace_id = params[_WSID] diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index def9a499..57cd8848 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -13,9 +13,14 @@ from installed_clients.DataFileUtilClient import DataFileUtil from installed_clients.WSLargeDataIOClient import WsLargeDataIO from GenomeFileUtil.core import GenomeUtils +from GenomeFileUtil.core.MiscUtils import get_int MAX_GENOME_SIZE = 2**30 +_WS = "workspace" +_WSID = "workspace_id" +_INPUTS = "inputs" + class GenomeInterface: def __init__(self, config): @@ -32,18 +37,80 @@ def __init__(self, config): self.scratch = config.raw['scratch'] self.ws_large_data = WsLargeDataIO(self.callback_url) - @staticmethod - def _validate_save_one_genome_params(params): + def save_one_genome(self, params): + print("validating parameters") + mass_params = self._set_up_single_params(params) + return self._save_genome_mass(mass_params)[0] + + def save_genome_mass(self, params): + print("validating parameters") + self._validate_mass_params(params) + return self._save_genome_mass(params) + + def _set_up_single_params(self, params): + inputs = dict(params) + self._validate_genome_input_params(inputs) + ws_id = get_int(inputs.pop(_WSID, None), _WSID) + ws_name = inputs.pop('workspace', None) + if bool(ws_id) == bool(ws_name): # xnor + raise ValueError(f"Exactly one of a '{_WSID}' or a '{_WS}' parameter must be provided") + if not ws_id: + print(f"Translating workspace name {ws_name} to a workspace ID. Prefer submitting " + + "a workspace ID over a mutable workspace name that may cause race conditions") + ws_id = self.dfu.ws_name_to_id(ws_name) + mass_params = {_WSID: ws_id, _INPUTS: [inputs]} + return mass_params + + def _validate_mass_params(self, params): + ws_id = get_int(params.get(_WSID), _WSID) + if not ws_id: + raise ValueError(f"{_WSID} is required") + inputs = params.get(_INPUTS) + if not inputs or type(inputs) != list: + raise ValueError(f"{_INPUTS} field is required and must be a non-empty list") + for i, inp in enumerate(inputs, start=1): + if type(inp) != dict: + raise ValueError(f"Entry #{i} in {_INPUTS} field is not a mapping as required") + try: + self._validate_genome_input_params(inp) + except Exception as e: + raise ValueError(f"Entry #{i} in {_INPUTS} field has invalid params: {e}") from e + + def _validate_genome_input_params(self, genome_input): """ - _validate_save_one_genome_params: - validates params passed to save_one_genome method + Check required parameters are in genome_input """ - logging.info('start validating save_one_genome params') + logging.info("start validating genome_input params") # check for required parameters - for p in ['workspace', 'name', 'data']: - if p not in params: - raise ValueError( - '"{}" parameter is required, but missing'.format(p)) + for p in ["name", "data"]: + if p not in genome_input: + raise ValueError(f"{p} parameter is required, but missing") + + def _save_genome_objects( + self, + workspace_id, + ws_datatypes, + data_paths, + names, + meta_data, + hidden_data, + ): + ws_inputs = [] + for ws_datatype, data_path, name, meta, hidden in zip( + ws_datatypes, data_paths, names, meta_data, hidden_data + ): + ws_inputs.append( + { + 'type': ws_datatype, + 'data_json_file': data_path, + 'name': name, + 'meta': meta, + 'hidden': hidden, + } + ) + return self.ws_large_data.save_objects( + {'id': workspace_id, 'objects': ws_inputs} + ) def _check_shock_response(self, response, errtxt): """ @@ -128,54 +195,75 @@ def get_one_genome(self, params): return data, res['info'] # return self.dfu.get_objects(params)['data'][0] - def save_one_genome(self, params): - logging.info('start saving genome object') - self._validate_save_one_genome_params(params) - workspace = params['workspace'] - name = params['name'] - data = params['data'] - # XXX there is no `workspace_datatype` param in the spec - ws_datatype = params.get('workspace_datatype', "KBaseGenomes.Genome") - # XXX there is no `meta` param in the spec - meta = params.get('meta', {}) - if "AnnotatedMetagenomeAssembly" in ws_datatype: - if params.get('upgrade') or 'feature_counts' not in data: - data = self._update_metagenome(data) - else: - if params.get('upgrade') or 'feature_counts' not in data: - data = self._update_genome(data) - - # check all handles point to shock nodes owned by calling user - self._own_handle(data, 'genbank_handle_ref') - self._own_handle(data, 'gff_handle_ref') - if "AnnotatedMetagenomeAssembly" not in ws_datatype: - self._check_dna_sequence_in_features(data) - data['warnings'] = self.validate_genome(data) - - # sort data - data = GenomeUtils.sort_dict(data) - # dump genome to scratch for upload - data_path = os.path.join(self.scratch, name + ".json") - json.dump(data, open(data_path, 'w')) - if 'hidden' in params and str(params['hidden']).lower() in ('yes', 'true', 't', '1'): - hidden = 1 - else: - hidden = 0 - - if isinstance(workspace, int) or workspace.isdigit(): - workspace_id = workspace - else: - workspace_id = self.dfu.ws_name_to_id(workspace) - - save_params = {'id': workspace_id, - 'objects': [{'type': ws_datatype, - 'data_json_file': data_path, - 'name': name, - 'meta': meta, - 'hidden': hidden}]} - dfu_oi = self.ws_large_data.save_objects(save_params)[0] - returnVal = {'info': dfu_oi, 'warnings': data.get('warnings', [])} - return returnVal + def _save_genome_mass(self, params): + + workspace_id = params[_WSID] + inputs = params[_INPUTS] + + ws_datatypes = [] + data_paths = [] + names = [] + meta_data = [] + hidden_data = [] + warnings = [] + + for input_params in inputs: + + # retrive required params + name = input_params['name'] + data = input_params['data'] + + # XXX there is no `workspace_datatype` param in the spec + ws_datatype = input_params.get('workspace_datatype', "KBaseGenomes.Genome") + # XXX there is no `meta` param in the spec + meta = input_params.get('meta', {}) + + ws_datatypes.append(ws_datatype) + names.append(name) + meta_data.append(meta) + + if "AnnotatedMetagenomeAssembly" in ws_datatype: + if input_params.get('upgrade') or 'feature_counts' not in data: + data = self._update_metagenome(data) + else: + if input_params.get('upgrade') or 'feature_counts' not in data: + data = self._update_genome(data) + + # check all handles point to shock nodes owned by calling user + self._own_handle(data, 'genbank_handle_ref') + self._own_handle(data, 'gff_handle_ref') + if "AnnotatedMetagenomeAssembly" not in ws_datatype: + self._check_dna_sequence_in_features(data) + data['warnings'] = self.validate_genome(data) + + # sort data + data = GenomeUtils.sort_dict(data) + # dump genome to scratch for upload + data_path = os.path.join(self.scratch, name + ".json") + json.dump(data, open(data_path, 'w')) + if 'hidden' in params and str(params['hidden']).lower() in ('yes', 'true', 't', '1'): + hidden = 1 + else: + hidden = 0 + + data_paths.append(data_path) + hidden_data.append(hidden) + warnings.append(data.get('warnings', [])) + + dfu_infos = self._save_genome_objects( + workspace_id, + ws_datatypes, + data_paths, + names, + meta_data, + hidden_data, + ) + + output = [ + {'info': dfu_oi, 'warnings': warning} + for dfu_oi, warning in zip(dfu_infos, warnings) + ] + return output @staticmethod def determine_tier(source): diff --git a/lib/GenomeFileUtil/core/MiscUtils.py b/lib/GenomeFileUtil/core/MiscUtils.py index a34eb6f7..e99a7b71 100644 --- a/lib/GenomeFileUtil/core/MiscUtils.py +++ b/lib/GenomeFileUtil/core/MiscUtils.py @@ -12,3 +12,29 @@ def validate_lists_have_same_elements(l1, l2): diff = set(l1) ^ (set(l2)) # get the symmetric difference of the sets # check if all ids are shared return len(diff) == 0 + + +def get_int(putative_int, name, minimum=1): + """ + Validates and returns an integer value. + + This function checks whether the provided value is an integer and if it meets the specified minimum value. + If the checks are not passed, it raises a `ValueError` with a descriptive message. + + Args: + putative_int (int or None): The value to be validated and returned. If `None`, it will be returned as is. + name (str): A descriptive name for the value being checked. This is used in error messages. + minimum (int, optional): The minimum acceptable value for `putative_int`. Defaults to 1. + + Returns: + int: The validated integer if all checks are passed. + + Raises: + ValueError: If `putative_int` is not an integer, or if it is less than `minimum`. + """ + if putative_int is not None: + if type(putative_int) is not int: + raise ValueError(f"{name} must be an integer, got: {putative_int}") + if putative_int < minimum: + raise ValueError(f"{name} must be an integer >= {minimum}") + return putative_int diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 7a93d816..d2582d28 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -163,7 +163,7 @@ def test_bad_one_genome_params(self): invalidate_params = {'missing_workspace': 'workspace', 'name': 'name', 'data': 'data'} - error_msg = '"workspace" parameter is required, but missing' + error_msg = "Exactly one of a 'workspace_id' or a 'workspace' parameter must be provided" self.fail_save_one_genome(invalidate_params, error_msg) def test_one_genome(self): From a2fabf4f8dd9ecc5ec9be7f545c628f4f6244430 Mon Sep 17 00:00:00 2001 From: Sijie Date: Thu, 15 Aug 2024 18:22:14 -0700 Subject: [PATCH 02/70] fix positional arg #1 is the wrong type bug --- lib/GenomeFileUtil/core/GenbankToGenome.py | 2 +- lib/GenomeFileUtil/core/GenomeInterface.py | 4 +--- 2 files changed, 2 insertions(+), 4 deletions(-) diff --git a/lib/GenomeFileUtil/core/GenbankToGenome.py b/lib/GenomeFileUtil/core/GenbankToGenome.py index 8342e284..3bf11b0f 100644 --- a/lib/GenomeFileUtil/core/GenbankToGenome.py +++ b/lib/GenomeFileUtil/core/GenbankToGenome.py @@ -223,7 +223,7 @@ def _save_genomes(self, workspace_id, genome_objs): results = [ self.gi.save_one_genome( { - 'workspace': workspace_id, + 'workspace_id': workspace_id, 'name': genome_obj.genome_name, 'data': genome_obj.genome_data, "meta": genome_obj.genome_meta, diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index 57cd8848..14152493 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -38,12 +38,10 @@ def __init__(self, config): self.ws_large_data = WsLargeDataIO(self.callback_url) def save_one_genome(self, params): - print("validating parameters") mass_params = self._set_up_single_params(params) return self._save_genome_mass(mass_params)[0] def save_genome_mass(self, params): - print("validating parameters") self._validate_mass_params(params) return self._save_genome_mass(params) @@ -51,7 +49,7 @@ def _set_up_single_params(self, params): inputs = dict(params) self._validate_genome_input_params(inputs) ws_id = get_int(inputs.pop(_WSID, None), _WSID) - ws_name = inputs.pop('workspace', None) + ws_name = inputs.pop(_WS, None) if bool(ws_id) == bool(ws_name): # xnor raise ValueError(f"Exactly one of a '{_WSID}' or a '{_WS}' parameter must be provided") if not ws_id: From 330d6c2da8a0dc2d57efffe690e8db2928455776 Mon Sep 17 00:00:00 2001 From: Sijie Date: Thu, 15 Aug 2024 19:58:38 -0700 Subject: [PATCH 03/70] use batch genome save in GenbankToGenome.py --- lib/GenomeFileUtil/core/GenbankToGenome.py | 24 +++++++++++----------- 1 file changed, 12 insertions(+), 12 deletions(-) diff --git a/lib/GenomeFileUtil/core/GenbankToGenome.py b/lib/GenomeFileUtil/core/GenbankToGenome.py index 3bf11b0f..606f83e3 100644 --- a/lib/GenomeFileUtil/core/GenbankToGenome.py +++ b/lib/GenomeFileUtil/core/GenbankToGenome.py @@ -202,7 +202,6 @@ def _import_genbank_mass(self, params): for genome_obj in genome_objs: shutil.rmtree(genome_obj.input_directory) - # TODO make an internal mass function save_genomes results = self._save_genomes(workspace_id, genome_objs) # return the result @@ -220,17 +219,18 @@ def _import_genbank_mass(self, params): return details def _save_genomes(self, workspace_id, genome_objs): - results = [ - self.gi.save_one_genome( - { - 'workspace_id': workspace_id, - 'name': genome_obj.genome_name, - 'data': genome_obj.genome_data, - "meta": genome_obj.genome_meta, - } - ) for genome_obj in genome_objs - ] - + results = self.gi.save_genome_mass( + { + "workspace_id": workspace_id, + "inputs": [ + { + "name": genome_obj.genome_name, + "data": genome_obj.genome_data, + "meta": genome_obj.genome_meta, + } for genome_obj in genome_objs + ], + } + ) return results def _validate_params(self, params): From 27158ec45fcfdfb2883200e6500d2c2e34319979 Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 16 Aug 2024 15:08:27 -0700 Subject: [PATCH 04/70] make save_genome_mass function internal --- GenomeFileUtil.spec | 19 - RELEASE_NOTES.md | 3 +- lib/GenomeFileUtil/GenomeFileUtilImpl.py | 438 +-------------------- lib/GenomeFileUtil/GenomeFileUtilServer.py | 4 - 4 files changed, 2 insertions(+), 462 deletions(-) diff --git a/GenomeFileUtil.spec b/GenomeFileUtil.spec index 5c06cff1..05cca1f9 100644 --- a/GenomeFileUtil.spec +++ b/GenomeFileUtil.spec @@ -332,25 +332,6 @@ module GenomeFileUtil { funcdef save_one_genome(SaveOneGenomeParams params) returns (SaveGenomeResult returnVal) authentication required; - typedef structure { - string name; - KBaseGenomes.Genome data; - boolean hidden; - boolean upgrade; - } GenomeInput; - - typedef structure { - int workspace_id; - list inputs; - } SaveGenomesParams; - - typedef structure { - list results; - } SaveGenomesResults; - - funcdef save_genomes(SaveGenomesParams params) - returns(SaveGenomesResults results) authentication required; - /* gff_file - object containing path to gff_file ws_ref - input Assembly or Genome reference diff --git a/RELEASE_NOTES.md b/RELEASE_NOTES.md index 260b4aa4..91c21b83 100644 --- a/RELEASE_NOTES.md +++ b/RELEASE_NOTES.md @@ -6,8 +6,7 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). ## [0.11.7] - TBD -- The `save_genomes` method was added to allow users to save genmes in batch -- Parsed and validated genome before upload +- The internal method `save_genome_mass` was added to facilitate the batch saving of genomes - Unusable `export_genome_features_protein_to_fasta` function was removed - The `genbanks_to_genomes` method was added to allow users to upload multiple genome objects at once diff --git a/lib/GenomeFileUtil/GenomeFileUtilImpl.py b/lib/GenomeFileUtil/GenomeFileUtilImpl.py index 98543d35..9ae1311d 100644 --- a/lib/GenomeFileUtil/GenomeFileUtilImpl.py +++ b/lib/GenomeFileUtil/GenomeFileUtilImpl.py @@ -69,7 +69,7 @@ class GenomeFileUtil: ######################################### noqa VERSION = "0.11.7" GIT_URL = "git@github.com:kbaseapps/GenomeFileUtil.git" - GIT_COMMIT_HASH = "4819598e65eea38d3c38d8c2ab808aca0d9697fd" + GIT_COMMIT_HASH = "330d6c2da8a0dc2d57efffe690e8db2928455776" #BEGIN_CLASS_HEADER #END_CLASS_HEADER @@ -1262,442 +1262,6 @@ def save_one_genome(self, ctx, params): # return the results return [returnVal] - def save_genomes(self, ctx, params): - """ - :param params: instance of type "SaveGenomesParams" -> structure: - parameter "workspace_id" of Long, parameter "inputs" of list of - type "GenomeInput" -> structure: parameter "name" of String, - parameter "data" of type "Genome" (Genome type -- annotated and - assembled genome data. Field descriptions: id - string - KBase - legacy data ID scientific_name - string - human readable species - name domain - string - human readable phylogenetic domain name - (eg. "Bacteria") warnings - list of string - genome-level warnings - generated in the annotation process genome_tiers - list of string - - controlled vocabulary (based on app input and checked by - GenomeFileUtil) A list of labels describing the data source for - this genome. Allowed values - Representative, Reference, - ExternalDB, User Tier assignments based on genome source: * All - phytozome - Representative and ExternalDB * Phytozome flagship - genomes - Reference, Representative and ExternalDB * Ensembl - - Representative and ExternalDB * RefSeq Reference - Reference, - Representative and ExternalDB * RefSeq Representative - - Representative and ExternalDB * RefSeq Latest or All Assemblies - folder - ExternalDB * User Data - User tagged feature_counts - map - of string to integer - total counts of each type of feature keys - are a controlled vocabulary of - "CDS", "gene", "misc_feature", - "misc_recomb", "mobile_element", "ncRNA" - 72, - "non_coding_features", "non_coding_genes", - "protein_encoding_gene", "rRNA", "rep_origin", "repeat_region", - "tRNA" genetic_code - int - An NCBI-assigned taxonomic category - for the organism See here - - https://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi dna_size - - integer - total number of nucleotides num_contigs - integer - - total number of contigs in the genome molecule_type - string - - controlled vocab - the type of molecule sequenced Possible values - are "Unknown", "DNA", "RNA", "genomic DNA", "genomic RNA", "mRNA", - "tRNA", "rRNA", "other RNA", "other DNA", "transcribed RNA", - "viral cRNA", "unassigned DNA", "unassigned RNA" contig_lengths - - list of int - nucleotide length of each contig in the genome - Indexes in this list correspond to indexes in the `contig_ids` - list. contig_ids - list of str - external database identifiers for - each contig (eg. "NC_000913.3") source - str - controlled vocab - - descriptor of where this data came from (eg. "RefSeq") Allowed - entries RefSeq, Ensembl, Phytozome, RAST, Prokka, User_upload - source_id - string - identifier of this genome from the source - database (eg. the RefSeq ID such as "NC_000913") md5 - string - - checksum of the underlying assembly sequence taxonomy - string - - semicolon-delimited taxonomy lineage, in order of parent to child - taxon_assignments - mapping of taxonomy namespace to taxon ID. - example - {"ncbi": "286", "gtdb": "s__staphylococcus_devriesei"} - gc_content - float - ratio of GC count to AT in the genome - publications - tuple of (pubmedid, source, title, web_addr, year, - authors, journal). See typedef above. ontology_events - A record - of the service and method used for a set of ontology assignments - on the genome. ontologies_present - a mapping of ontology source - id (eg. "GO") to a mapping of term IDs (eg "GO:16209") to term - names (eg. "histidine biosynthetic process"). features - array of - Feature - protein coding genes (see the separate Feature spec) - cdss - array of protein-coding sequences mrnas - array of - transcribed messenger RNA sequences (equal to cdss plus 5' and 3' - UTRs) non_coding_features - array of features that does not - include mRNA, CDS, and protein-encoding genes assembly_ref - - workspace reference to an assembly object from which this - annotated genome was derived. taxon_ref - workspace reference to a - taxon object that classifies the species or strain of this genome. - genbank_handle_ref - file server handle reference to the source - genbank file for this genome. gff_handle_ref - file server handle - reference to the source GFF file for this genome. - external_source_origination_date - TODO look at GFU for this - release - string - User-supplied release or version of the source - data. This most likely will come from an input field in the import - app. original_source_file_name - filename from which this genome - was derived (eg. genbank or gff filename). notes - TODO - quality_scores - TODO suspect - bool - flag of whether this - annotation is problematic due to some warning genome_type - string - - controlled vocab - One of "draft isolate", "finished isolate", - "mag", "sag", "virus", "plasmid", "construct" Features vs. coding - sequences: a feature is a sequence in the DNA that codes for a - protein, including non-transcribed introns. A coding sequence - (stored as `cdss`) includes **only** the sections of the feature - that codes for a protein, minus introns and UTRs. @optional - warnings contig_lengths contig_ids source_id taxonomy publications - @optional ontology_events ontologies_present non_coding_features - mrnas genome_type @optional genbank_handle_ref gff_handle_ref - external_source_origination_date @optional release - original_source_file_name notes quality_scores suspect - assembly_ref @optional taxon_ref taxon_assignments @metadata ws - gc_content as GC content @metadata ws taxonomy as Taxonomy - @metadata ws md5 as MD5 @metadata ws dna_size as Size @metadata ws - genetic_code as Genetic code @metadata ws domain as Domain - @metadata ws source_id as Source ID @metadata ws source as Source - @metadata ws scientific_name as Name @metadata ws genome_type as - Type @metadata ws length(features) as Number of Protein Encoding - Genes @metadata ws length(cdss) as Number of CDS @metadata ws - assembly_ref as Assembly Object @metadata ws num_contigs as Number - contigs @metadata ws length(warnings) as Number of Genome Level - Warnings @metadata ws suspect as Suspect Genome) -> structure: - parameter "id" of type "Genome_id" (KBase legacy data ID @id kb), - parameter "scientific_name" of String, parameter "domain" of - String, parameter "warnings" of list of String, parameter - "genome_tiers" of list of String, parameter "feature_counts" of - mapping from String to Long, parameter "genetic_code" of Long, - parameter "dna_size" of Long, parameter "num_contigs" of Long, - parameter "molecule_type" of String, parameter "contig_lengths" of - list of Long, parameter "contig_ids" of list of String, parameter - "source" of String, parameter "source_id" of type "source_id" - (Reference to a source_id @id external), parameter "md5" of - String, parameter "taxonomy" of String, parameter - "taxon_assignments" of mapping from String to String, parameter - "gc_content" of Double, parameter "publications" of list of type - "publication" (Structure for a publication Elements: (0) pubmedid - - float (1) source - string - (ex. Pubmed) (2) title - string (3) - string web address - string (4) publication year - string (5) - authors - string (6) journal - string) -> tuple of size 7: - parameter "pubmedid" of Double, parameter "source" of String, - parameter "title" of String, parameter "url" of String, parameter - "year" of String, parameter "authors" of String, parameter - "journal" of String, parameter "ontology_events" of list of type - "Ontology_event" (@optional ontology_ref method_version eco) -> - structure: parameter "id" of String, parameter "ontology_ref" of - type "Ontology_ref" (Reference to a ontology object @id ws - KBaseOntology.OntologyDictionary), parameter "method" of String, - parameter "method_version" of String, parameter "timestamp" of - String, parameter "eco" of String, parameter "ontologies_present" - of mapping from String to mapping from String to String, parameter - "features" of list of type "Feature" (Structure for a single CDS - encoding "gene" of a genome ONLY PUT GENES THAT HAVE A - CORRESPONDING CDS IN THIS ARRAY NOTE: Sequence is optional. - Ideally we can keep it in here, but Recognize due to space - constraints another solution may be needed. We may want to add - additional fields for other CDM functions (e.g., atomic regulons, - coexpressed fids, co_occurring fids,...) - protein_translation_length and protein_translation are for longest - coded protein (representative protein for splice variants) NOTE: - New Aliases field definitely breaks compatibility. As Does - Function. flags are flag fields in GenBank format. This will be a - controlled vocabulary. Initially Acceptable values are pseudo, - ribosomal_slippage, and trans_splicing Md5 is the md5 of - dna_sequence. @optional functions ontology_terms note - protein_translation mrnas flags warnings @optional inference_data - dna_sequence aliases db_xrefs children functional_descriptions) -> - structure: parameter "id" of type "Feature_id" (KBase Feature ID - @id external), parameter "location" of list of tuple of size 4: - type "Contig_id" (ContigSet contig ID @id external), Long, String, - Long, parameter "functions" of list of String, parameter - "functional_descriptions" of list of String, parameter - "ontology_terms" of mapping from String to mapping from String to - list of Long, parameter "note" of String, parameter "md5" of - String, parameter "protein_translation" of String, parameter - "protein_translation_length" of Long, parameter "cdss" of list of - String, parameter "mrnas" of list of String, parameter "children" - of list of String, parameter "flags" of list of String, parameter - "warnings" of list of String, parameter "inference_data" of list - of type "InferenceInfo" (Type spec for the "InferenceInfo" object. - TODO docs Found in the `inference_data` fields in mRNAs and CDSs - Fields: category - string - TODO type - string - TODO evidence - - string - TODO) -> structure: parameter "category" of String, - parameter "type" of String, parameter "evidence" of String, - parameter "dna_sequence" of String, parameter - "dna_sequence_length" of Long, parameter "aliases" of list of - tuple of size 2: parameter "fieldname" of String, parameter - "alias" of String, parameter "db_xrefs" of list of tuple of size - 2: parameter "db_source" of String, parameter "db_identifier" of - String, parameter "non_coding_features" of list of type - "NonCodingFeature" (Structure for a single feature that is NOT one - of the following: - Protein encoding gene (gene that has a - corresponding CDS) - mRNA - CDS Note pseudo-genes and Non protein - encoding genes are put into this flags are flag fields in GenBank - format. This will be a controlled vocabulary. Initially Acceptable - values are pseudo, ribosomal_slippage, and trans_splicing Md5 is - the md5 of dna_sequence. @optional functions ontology_terms note - flags warnings functional_descriptions @optional inference_data - dna_sequence aliases db_xrefs children parent_gene) -> structure: - parameter "id" of type "Feature_id" (KBase Feature ID @id - external), parameter "location" of list of tuple of size 4: type - "Contig_id" (ContigSet contig ID @id external), Long, String, - Long, parameter "type" of String, parameter "functions" of list of - String, parameter "functional_descriptions" of list of String, - parameter "ontology_terms" of mapping from String to mapping from - String to list of Long, parameter "note" of String, parameter - "md5" of String, parameter "parent_gene" of String, parameter - "children" of list of String, parameter "flags" of list of String, - parameter "warnings" of list of String, parameter "inference_data" - of list of type "InferenceInfo" (Type spec for the "InferenceInfo" - object. TODO docs Found in the `inference_data` fields in mRNAs - and CDSs Fields: category - string - TODO type - string - TODO - evidence - string - TODO) -> structure: parameter "category" of - String, parameter "type" of String, parameter "evidence" of - String, parameter "dna_sequence" of String, parameter - "dna_sequence_length" of Long, parameter "aliases" of list of - tuple of size 2: parameter "fieldname" of String, parameter - "alias" of String, parameter "db_xrefs" of list of tuple of size - 2: parameter "db_source" of String, parameter "db_identifier" of - String, parameter "cdss" of list of type "CDS" (Structure for a - single coding sequence. Coding sequences are the sections of a - feature's sequence that are translated to a protein (minus introns - and UTRs). Fields: id - string - identifier of the coding - sequence, such as "b0001_CDS_1" location - list> - list of locations from where this sequence - originates in the original assembly. Each sub-sequence in the list - constitutes a section of the resulting CDS. The first element in - the tuple corresponds to the "contig_id", such as "NC_000913.3". - The second element in the tuple is an index in the contig of where - the sequence starts. The third element is either a plus or minus - sign indicating whether it is on the 5' to 3' leading strand ("+") - or on the 3' to 5' lagging strand ("-"). The last element is the - length of the sub-sequence. For a location on the leading strand - (denoted by "+"), the index is of the leftmost base, and the - sequence extends to the right. For a location on the lagging - strand (denoted by "-"), the index is of the rightmost base, and - the sequence extends to the left. NOTE: the last element in each - tuple is the *length* of each sub-sequence. If you have a location - such as ("xyz", 100, "+", 50), then your sequence will go from - index 100 to index 149 (this has a length of 50). It *does not* go - from index 100 to index 150, as that would have a length of 51. - Likewise, if you have the location ("xyz", 100, "-", 50), then the - sequence extends from 100 down to 51, which has a length of 50 - bases. It does not go from index 100 to 50, as that would have a - length of 51. md5 - string - md5 of the dna sequence - TODO - clarification protein_md5 - string - hash of the protein sequence - that this CDS encodes parent_gene - string - gene (feature) from - which this CDS comes from, including introns and UTRs that have - been removed to create this CDS. parent_mrna - string - mRNA - sequence from which this sequence is derived, including UTRs but - not introns. note - string - TODO functions - list - list - of protein products or chemical processes that this sequence - creates, facilitates, or influences. functional_descriptions - - list - TODO list of protein products or chemical processes - that sequence creates, facilitates, or influences. ontology_terms - - mapping>> - a mapping of - ontology source id (eg. "GO") to a mapping of term IDs (eg - "GO:16209") to a list of indexes into the ontology_events data - (found in the top level of the genome object). The index into an - ontology event indicates what service and method created this term - assignment. flags - list - (controlled vocab) fields from - the genbank source. A common example is "pseudo" for pseudo-genes - that do not encode proteins, which shows up as "/pseudo" in the - genbank. Values can be: "pseudo", "ribosomal_slippage", - "trans_splicing" warnings - list - TODO inference_data - - list - TODO protein_translation - string - amino - acid sequence that this CDS gets translated into. - protein_translation_length - int - length of the above aliases - - list<(string, string)> - alternative list of names or identifiers - eg: [["gene", "thrA"], ["locus_tag", "b0002"]] db_xrefs - - list<(string, string)> - Identifiers from other databases - (database cross-references) The first string is the database name, - the second is the database identifier. eg: [["ASAP", - "ABE-0000006"], ["EcoGene", "EG11277"]] dna_sequence - string - - sequence of exons from the genome that constitute this protein - encoding sequence. dna_sequence_length - int - length of the above - @optional parent_gene parent_mrna functions ontology_terms note - flags warnings @optional inference_data dna_sequence aliases - db_xrefs functional_descriptions) -> structure: parameter "id" of - type "cds_id" (KBase CDS ID @id external), parameter "location" of - list of tuple of size 4: type "Contig_id" (ContigSet contig ID @id - external), Long, String, Long, parameter "md5" of String, - parameter "protein_md5" of String, parameter "parent_gene" of type - "Feature_id" (KBase Feature ID @id external), parameter - "parent_mrna" of type "mrna_id" (KBase mRNA ID @id external), - parameter "note" of String, parameter "functions" of list of - String, parameter "functional_descriptions" of list of String, - parameter "ontology_terms" of mapping from String to mapping from - String to list of Long, parameter "flags" of list of String, - parameter "warnings" of list of String, parameter "inference_data" - of list of type "InferenceInfo" (Type spec for the "InferenceInfo" - object. TODO docs Found in the `inference_data` fields in mRNAs - and CDSs Fields: category - string - TODO type - string - TODO - evidence - string - TODO) -> structure: parameter "category" of - String, parameter "type" of String, parameter "evidence" of - String, parameter "protein_translation" of String, parameter - "protein_translation_length" of Long, parameter "aliases" of list - of tuple of size 2: parameter "fieldname" of String, parameter - "alias" of String, parameter "db_xrefs" of list of tuple of size - 2: parameter "db_source" of String, parameter "db_identifier" of - String, parameter "dna_sequence" of String, parameter - "dna_sequence_length" of Long, parameter "mrnas" of list of type - "mRNA" (The mRNA is the transcribed sequence from the original - feature, minus the introns, but including the UTRs. Fields: id - - string - identifying string for the mRNA location - - list> - list of locations from - where this sequence originates in the original assembly. Each - sub-sequence in the list constitutes a section of the resulting - CDS. The first element in the tuple corresponds to the - "contig_id", such as "NC_000913.3". The second element in the - tuple is an index in the contig of where the sequence starts. The - third element is either a plus or minus sign indicating whether it - is on the 5' to 3' leading strand ("+") or on the 3' to 5' lagging - strand ("-"). The last element is the length of the sub-sequence. - For a location on the leading strand (denoted by "+"), the index - is of the leftmost base, and the sequence extends to the right. - For a location on the lagging strand (denoted by "-"), the index - is of the rightmost base, and the sequence extends to the left. - NOTE: the last element in each tuple is the *length* of each - sub-sequence. If you have a location such as ("xyz", 100, "+", - 50), then your sequence will go from index 100 to index 149 (this - has a length of 50). It *does not* go from index 100 to index 150, - as that would have a length of 51. Likewise, if you have the - location ("xyz", 100, "-", 50), then the sequence extends from 100 - down to 51, which has a length of 50 bases. It does not go from - index 100 to 50, as that would have a length of 51. md5 - string - - md5 of the dna sequence - TODO clarification parent_gene - - Feature_id - corresponding feature for this sequence, including - introns and UTRs cds - string - corresponding coding sequence for - this mRNA (the sequence minus UTRs) dna_sequence - string - - sequence of UTRs and exons from the genome that constitute this - mRNA dna_sequence_length - int - length of the above note - string - - TODO functions - list - TODO list of protein products or - chemical processes that sequence creates, facilitates, or - influences. functional_descriptions - list - TODO list of - protein products or chemical processes that sequence creates, - facilitates, or influences. ontology_terms - mapping>> - a mapping of ontology source id (eg. - "GO") to a mapping of term IDs (eg "GO:16209") to a list of - indexes into the ontology_events data (found in the top level of - the genome object). The index into an ontology event indicates - what service and method created this term assignment. flags - - list - controlled vocab - fields from the genbank source. - A common example is "pseudo" for pseudo-genes that do not encode - proteins, which shows up as "/pseudo" in the genbank. Values can - be: "pseudo", "ribosomal_slippage", "trans_splicing" warnings - - list - TODO inference_data - list - TODO - aliases - list<(string, string)> - alternative list of names or - identifiers eg: [["gene", "thrA"], ["locus_tag", "b0002"]] - db_xrefs - list<(string, string)> - Identifiers from other - databases (database cross-references). The first string is the - database name, the second is the database identifier. eg: - [["ASAP", "ABE-0000006"], ["EcoGene", "EG11277"]] @optional - parent_gene cds functions ontology_terms note flags warnings - @optional inference_data dna_sequence aliases db_xrefs - functional_descriptions) -> structure: parameter "id" of type - "mrna_id" (KBase mRNA ID @id external), parameter "location" of - list of tuple of size 4: type "Contig_id" (ContigSet contig ID @id - external), Long, String, Long, parameter "md5" of String, - parameter "parent_gene" of type "Feature_id" (KBase Feature ID @id - external), parameter "cds" of type "cds_id" (KBase CDS ID @id - external), parameter "dna_sequence" of String, parameter - "dna_sequence_length" of Long, parameter "note" of String, - parameter "functions" of list of String, parameter - "functional_descriptions" of list of String, parameter - "ontology_terms" of mapping from String to mapping from String to - list of Long, parameter "flags" of list of String, parameter - "warnings" of list of String, parameter "inference_data" of list - of type "InferenceInfo" (Type spec for the "InferenceInfo" object. - TODO docs Found in the `inference_data` fields in mRNAs and CDSs - Fields: category - string - TODO type - string - TODO evidence - - string - TODO) -> structure: parameter "category" of String, - parameter "type" of String, parameter "evidence" of String, - parameter "aliases" of list of tuple of size 2: parameter - "fieldname" of String, parameter "alias" of String, parameter - "db_xrefs" of list of tuple of size 2: parameter "db_source" of - String, parameter "db_identifier" of String, parameter - "assembly_ref" of type "Assembly_ref" (Reference to an Assembly - object in the workspace @id ws KBaseGenomeAnnotations.Assembly), - parameter "taxon_ref" of type "Taxon_ref" (Reference to a taxon - object @id ws KBaseGenomeAnnotations.Taxon), parameter - "genbank_handle_ref" of type "genbank_handle_ref" (Reference to a - handle to the Genbank file on shock @id handle), parameter - "gff_handle_ref" of type "gff_handle_ref" (Reference to a handle - to the GFF file on shock @id handle), parameter - "external_source_origination_date" of String, parameter "release" - of String, parameter "original_source_file_name" of String, - parameter "notes" of String, parameter "quality_scores" of list of - type "GenomeQualityScore" (Genome quality score Fields: method - - string - TODO method_report_ref - string - TODO method_version - - string - TODO score: string - TODO score_interpretation - string - - TODO timestamp - string - TODO Score_interpretation - - fraction_complete - controlled vocabulary managed by API @optional - method_report_ref method_version) -> structure: parameter "method" - of String, parameter "method_report_ref" of type - "Method_report_ref" (Reference to a report object @id ws - KBaseReport.Report), parameter "method_version" of String, - parameter "score" of String, parameter "score_interpretation" of - String, parameter "timestamp" of String, parameter "suspect" of - type "Bool", parameter "genome_type" of String, parameter "hidden" - of type "boolean" (A boolean - 0 for false, 1 for true. @range (0, - 1)), parameter "upgrade" of type "boolean" (A boolean - 0 for - false, 1 for true. @range (0, 1)) - :returns: instance of type "SaveGenomesResults" -> structure: - parameter "results" of list of type "SaveGenomeResult" -> - structure: parameter "info" of type "object_info" (Information - about an object, including user provided metadata. obj_id objid - - the numerical id of the object. obj_name name - the name of the - object. type_string type - the type of the object. timestamp - save_date - the save date of the object. obj_ver ver - the version - of the object. username saved_by - the user that saved or copied - the object. ws_id wsid - the workspace containing the object. - ws_name workspace - the workspace containing the object. string - chsum - the md5 checksum of the object. int size - the size of the - object in bytes. usermeta meta - arbitrary user-supplied metadata - about the object.) -> tuple of size 11: parameter "objid" of type - "obj_id" (The unique, permanent numerical ID of an object.), - parameter "name" of type "obj_name" (A string used as a name for - an object. Any string consisting of alphanumeric characters and - the characters |._- that is not an integer is acceptable.), - parameter "type" of type "type_string" (A type string. Specifies - the type and its version in a single string in the format - [module].[typename]-[major].[minor]: module - a string. The module - name of the typespec containing the type. typename - a string. The - name of the type as assigned by the typedef statement. major - an - integer. The major version of the type. A change in the major - version implies the type has changed in a non-backwards compatible - way. minor - an integer. The minor version of the type. A change - in the minor version implies that the type has changed in a way - that is backwards compatible with previous type definitions. In - many cases, the major and minor versions are optional, and if not - provided the most recent version will be used. Example: - MyModule.MyType-3.1), parameter "save_date" of type "timestamp" (A - time in the format YYYY-MM-DDThh:mm:ssZ, where Z is either the - character Z (representing the UTC timezone) or the difference in - time to UTC in the format +/-HHMM, eg: 2012-12-17T23:24:06-0500 - (EST time) 2013-04-03T08:56:32+0000 (UTC time) - 2013-04-03T08:56:32Z (UTC time)), parameter "version" of Long, - parameter "saved_by" of type "username" (Login name of a KBase - user account.), parameter "wsid" of type "ws_id" (The unique, - permanent numerical ID of a workspace.), parameter "workspace" of - type "ws_name" (A string used as a name for a workspace. Any - string consisting of alphanumeric characters and "_", ".", or "-" - that is not an integer is acceptable. The name may optionally be - prefixed with the workspace owner's user name and a colon, e.g. - kbasetest:my_workspace.), parameter "chsum" of String, parameter - "size" of Long, parameter "meta" of type "usermeta" (User provided - metadata about an object. Arbitrary key-value pairs provided by - the user.) -> mapping from String to String - """ - # ctx is the context object - # return variables are: results - #BEGIN save_genomes - results = { - "results": GenomeInterface(self.cfg).save_genome_mass(params) - } - #END save_genomes - - # At some point might do deeper type checking... - if not isinstance(results, dict): - raise ValueError('Method save_genomes return value ' + - 'results is not type dict as required.') - # return the results - return [results] - def ws_obj_gff_to_genome(self, ctx, params): """ This function takes in a workspace object of type KBaseGenomes.Genome or KBaseGenomeAnnotations.Assembly and a gff file and produces a KBaseGenomes.Genome reanotated according to the the input gff file. diff --git a/lib/GenomeFileUtil/GenomeFileUtilServer.py b/lib/GenomeFileUtil/GenomeFileUtilServer.py index 2c09c2e0..6ae2c611 100644 --- a/lib/GenomeFileUtil/GenomeFileUtilServer.py +++ b/lib/GenomeFileUtil/GenomeFileUtilServer.py @@ -394,10 +394,6 @@ def __init__(self): name='GenomeFileUtil.save_one_genome', types=[dict]) self.method_authentication['GenomeFileUtil.save_one_genome'] = 'required' # noqa - self.rpc_service.add(impl_GenomeFileUtil.save_genomes, - name='GenomeFileUtil.save_genomes', - types=[dict]) - self.method_authentication['GenomeFileUtil.save_genomes'] = 'required' # noqa self.rpc_service.add(impl_GenomeFileUtil.ws_obj_gff_to_genome, name='GenomeFileUtil.ws_obj_gff_to_genome', types=[dict]) From 04aa20302e6deee46b1a318330dd884f167a5a6f Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 16 Aug 2024 17:33:16 -0700 Subject: [PATCH 05/70] add tests for save_genome_mass function --- test/problematic_tests/save_genome_test.py | 85 +++++++++++++++++++++- 1 file changed, 82 insertions(+), 3 deletions(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index d2582d28..93b2ea31 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -92,6 +92,7 @@ def setUpClass(cls): suffix = int(time.time() * 1000) cls.wsName = "test_SaveGenomeTest_" + str(suffix) cls.wsClient.create_workspace({'workspace': cls.wsName}) + cls.wsID = cls.dfu.ws_name_to_id(cls.wsName) cls.nodes_to_delete = [] cls.prepare_data() @@ -142,9 +143,12 @@ def start_test(self): testname = inspect.stack()[1][3] print(('\n*** starting test: ' + testname + ' **')) - def fail_save_one_genome(self, params, error, exception=ValueError, contains=False): + def fail_save_genome(self, params, error, exception=ValueError, contains=False, mass=False): with self.assertRaises(exception) as context: - self.getImpl().save_one_genome(self.ctx, params) + if mass: + self.genome_interface.save_genome_mass(params) + else: + self.getImpl().save_one_genome(self.ctx, params) if contains: self.assertIn(error, str(context.exception)) else: @@ -164,7 +168,7 @@ def test_bad_one_genome_params(self): 'name': 'name', 'data': 'data'} error_msg = "Exactly one of a 'workspace_id' or a 'workspace' parameter must be provided" - self.fail_save_one_genome(invalidate_params, error_msg) + self.fail_save_genome(invalidate_params, error_msg) def test_one_genome(self): self.start_test() @@ -192,6 +196,81 @@ def test_one_genome_with_hidden(self): ret = self.getImpl().save_one_genome(self.ctx, params)[0] self.check_save_one_genome_output(ret, genome_name) + def test_genomes(self): + self.start_test() + genome_name = 'test_genome' + inputs = [ + { + 'name': genome_name, + 'data': self.test_genome_data, + } + ] + params = {'workspace_id': self.wsID, 'inputs': inputs} + ret = self.genome_interface.save_genome_mass(params)[0] + self.check_save_one_genome_output(ret, genome_name) + + def test_genomes_with_hidden(self): + self.start_test() + genome_name = 'test_genome_hidden' + inputs = [ + { + 'name': genome_name, + 'data': self.test_genome_data, + 'hidden': 1, + } + ] + params = {'workspace_id': self.wsID, 'inputs': inputs} + ret = self.genome_interface.save_genome_mass(params)[0] + self.check_save_one_genome_output(ret, genome_name) + + inputs = [ + { + 'name': genome_name, + 'data': self.test_genome_data, + 'hidden': True, + } + ] + params = {'workspace_id': self.wsID, 'inputs': inputs} + ret = self.genome_interface.save_genome_mass(params)[0] + self.check_save_one_genome_output(ret, genome_name) + + def test_bad_genomes_params_missing_wsid(self): + self.start_test() + invalidate_params = { + 'missing_workspace_id': 'workspace_id', + 'name': 'name', + 'data': 'data', + } + error_msg = "workspace_id is required" + self.fail_save_genome(invalidate_params, error_msg, mass=True) + + def test_bad_genomes_params_empty_inputs(self): + self.start_test() + invalidate_params = { + 'workspace_id': self.wsID, + 'inputs': [] + } + error_msg = "inputs field is required and must be a non-empty list" + self.fail_save_genome(invalidate_params, error_msg, mass=True) + + def test_bad_genomes_params_invalidate_entry_type(self): + self.start_test() + invalidate_params = { + 'workspace_id': self.wsID, + 'inputs': [['name', 'data']], + } + error_msg = "Entry #1 in inputs field is not a mapping as required" + self.fail_save_genome(invalidate_params, error_msg, mass=True) + + def test_bad_genomes_params_missing_parameter(self): + self.start_test() + invalidate_params = { + 'workspace_id': self.wsID, + 'inputs': [{'data': 'data'}], + } + error_msg = "Entry #1 in inputs field has invalid params: name parameter is required, but missing" + self.fail_save_genome(invalidate_params, error_msg, mass=True) + def test_GenomeInterface_check_dna_sequence_in_features(self): # no feature in genome genome = {'missing_features': 'features'} From 8d672d17d45ff7dfb0150d3c4fc080a5bca43b16 Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 16 Aug 2024 22:40:31 -0700 Subject: [PATCH 06/70] fix bug --- lib/GenomeFileUtil/core/GenomeInterface.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index 14152493..990a19a8 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -239,7 +239,7 @@ def _save_genome_mass(self, params): # dump genome to scratch for upload data_path = os.path.join(self.scratch, name + ".json") json.dump(data, open(data_path, 'w')) - if 'hidden' in params and str(params['hidden']).lower() in ('yes', 'true', 't', '1'): + if 'hidden' in input_params and str(input_params['hidden']).lower() in ('yes', 'true', 't', '1'): hidden = 1 else: hidden = 0 From d1dd768292bfff29067c45e34e2c6ad0c15f2e21 Mon Sep 17 00:00:00 2001 From: Sijie Date: Mon, 26 Aug 2024 14:42:37 -0700 Subject: [PATCH 07/70] update release notes && make the dicts in the loop --- RELEASE_NOTES.md | 2 +- lib/GenomeFileUtil/core/GenomeInterface.py | 31 +++++++++++----------- 2 files changed, 17 insertions(+), 16 deletions(-) diff --git a/RELEASE_NOTES.md b/RELEASE_NOTES.md index 91c21b83..c0e69fda 100644 --- a/RELEASE_NOTES.md +++ b/RELEASE_NOTES.md @@ -6,7 +6,7 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). ## [0.11.7] - TBD -- The internal method `save_genome_mass` was added to facilitate the batch saving of genomes +- Genomes are now saved in batches to the workspace - Unusable `export_genome_features_protein_to_fasta` function was removed - The `genbanks_to_genomes` method was added to allow users to upload multiple genome objects at once diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index 990a19a8..66f6bd0a 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -93,22 +93,23 @@ def _save_genome_objects( meta_data, hidden_data, ): - ws_inputs = [] - for ws_datatype, data_path, name, meta, hidden in zip( - ws_datatypes, data_paths, names, meta_data, hidden_data - ): - ws_inputs.append( - { - 'type': ws_datatype, - 'data_json_file': data_path, - 'name': name, - 'meta': meta, - 'hidden': hidden, - } - ) - return self.ws_large_data.save_objects( - {'id': workspace_id, 'objects': ws_inputs} + dfu_infos = self.ws_large_data.save_objects( + { + 'id': workspace_id, + 'objects': [ + { + 'type': ws_datatype, + 'data_json_file': data_path, + 'name': name, + 'meta': meta, + 'hidden': hidden, + } for ws_datatype, data_path, name, meta, hidden in zip( + ws_datatypes, data_paths, names, meta_data, hidden_data + ) + ] + } ) + return dfu_infos def _check_shock_response(self, response, errtxt): """ From e79c297ab6522ee00faceb4bfb531d232dbb5b75 Mon Sep 17 00:00:00 2001 From: Sijie Date: Mon, 26 Aug 2024 15:23:53 -0700 Subject: [PATCH 08/70] remove logging && add NOTE for workspace_datatype --- lib/GenomeFileUtil/core/GenomeInterface.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index 66f6bd0a..321ae71b 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -78,7 +78,6 @@ def _validate_genome_input_params(self, genome_input): """ Check required parameters are in genome_input """ - logging.info("start validating genome_input params") # check for required parameters for p in ["name", "data"]: if p not in genome_input: @@ -213,6 +212,7 @@ def _save_genome_mass(self, params): data = input_params['data'] # XXX there is no `workspace_datatype` param in the spec + # NOTE: The method caller should not be able to choose an arbitrary workspace type ws_datatype = input_params.get('workspace_datatype', "KBaseGenomes.Genome") # XXX there is no `meta` param in the spec meta = input_params.get('meta', {}) From 35030a03fe3271681dca2fd9c924ac59ba501354 Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 28 Aug 2024 15:24:54 -0700 Subject: [PATCH 09/70] move set_up_single_params && validate_mass_params into GenomeUtils --- lib/GenomeFileUtil/core/GenbankToGenome.py | 40 ++-------- lib/GenomeFileUtil/core/GenomeInterface.py | 48 +++-------- lib/GenomeFileUtil/core/GenomeUtils.py | 93 +++++++++++++++++++++- test/problematic_tests/save_genome_test.py | 72 ++++++++--------- 4 files changed, 146 insertions(+), 107 deletions(-) diff --git a/lib/GenomeFileUtil/core/GenbankToGenome.py b/lib/GenomeFileUtil/core/GenbankToGenome.py index 606f83e3..ffdd55c3 100644 --- a/lib/GenomeFileUtil/core/GenbankToGenome.py +++ b/lib/GenomeFileUtil/core/GenbankToGenome.py @@ -19,11 +19,11 @@ from installed_clients.AssemblyUtilClient import AssemblyUtil from installed_clients.DataFileUtilClient import DataFileUtil from GenomeFileUtil.core.GenomeInterface import GenomeInterface -from GenomeFileUtil.core.MiscUtils import get_int from installed_clients.WorkspaceClient import Workspace from GenomeFileUtil.core.GenomeUtils import ( is_parent, propagate_cds_props_to_gene, warnings, parse_inferences, - load_ontology_mappings, set_taxon_data, set_default_taxon_data + load_ontology_mappings, set_taxon_data, set_default_taxon_data, + set_up_single_params, validate_mass_params ) MAX_MISC_FEATURE_SIZE = 10000 @@ -114,44 +114,16 @@ def __init__(self, config): def import_genbank(self, params): print('validating parameters') - mass_params = self._set_up_single_params(params) + mass_params = set_up_single_params( + params, _WSNAME, self._validate_params, self.dfu.ws_name_to_id + ) return self._import_genbank_mass(mass_params)[0] def import_genbank_mass(self, params): print('validating parameters') - self._validate_mass_params(params) + validate_mass_params(params, self._validate_params) return self._import_genbank_mass(params) - def _set_up_single_params(self, params): - # avoid side effects and keep variables in params unmodfied - inputs = dict(params) - self._validate_params(inputs) - ws_id = get_int(inputs.pop(_WSID, None), _WSID) - ws_name = inputs.pop(_WSNAME, None) - if (bool(ws_id) == bool(ws_name)): # xnor - raise ValueError(f"Exactly one of a '{_WSID}' or a '{_WSNAME}' parameter must be provided") - if not ws_id: - print(f"Translating workspace name {ws_name} to a workspace ID. Prefer submitting " - + "a workspace ID over a mutable workspace name that may cause race conditions") - ws_id = self.dfu.ws_name_to_id(ws_name) - mass_params = {_WSID: ws_id, _INPUTS: [inputs]} - return mass_params - - def _validate_mass_params(self, params): - ws_id = get_int(params.get(_WSID), _WSID) - if not ws_id: - raise ValueError(f"{_WSID} is required") - inputs = params.get(_INPUTS) - if not inputs or type(inputs) is not list: - raise ValueError(f"{_INPUTS} field is required and must be a non-empty list") - for i, inp in enumerate(inputs, start=1): - if type(inp) is not dict: - raise ValueError(f"Entry #{i} in {_INPUTS} field is not a mapping as required") - try: - self._validate_params(inp) - except Exception as e: - raise ValueError(f"Entry #{i} in {_INPUTS} field has invalid params: {e}") from e - def _import_genbank_mass(self, params): workspace_id = params[_WSID] diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index 321ae71b..33b0ff07 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -12,8 +12,10 @@ from installed_clients.AssemblySequenceAPIServiceClient import AssemblySequenceAPI from installed_clients.DataFileUtilClient import DataFileUtil from installed_clients.WSLargeDataIOClient import WsLargeDataIO -from GenomeFileUtil.core import GenomeUtils -from GenomeFileUtil.core.MiscUtils import get_int +from GenomeFileUtil.core.GenomeUtils import ( + set_taxon_data, set_default_taxon_data, sort_dict, + set_up_single_params, validate_mass_params +) MAX_GENOME_SIZE = 2**30 @@ -38,42 +40,16 @@ def __init__(self, config): self.ws_large_data = WsLargeDataIO(self.callback_url) def save_one_genome(self, params): - mass_params = self._set_up_single_params(params) + mass_params = set_up_single_params( + params, _WS, self._validate_genome_input_params, self.dfu.ws_name_to_id + ) return self._save_genome_mass(mass_params)[0] + # NOTE If there is more than 1GB of data or more than 10,000 genomes to upload, the workspace will fail. def save_genome_mass(self, params): - self._validate_mass_params(params) + validate_mass_params(params, self._validate_genome_input_params) return self._save_genome_mass(params) - def _set_up_single_params(self, params): - inputs = dict(params) - self._validate_genome_input_params(inputs) - ws_id = get_int(inputs.pop(_WSID, None), _WSID) - ws_name = inputs.pop(_WS, None) - if bool(ws_id) == bool(ws_name): # xnor - raise ValueError(f"Exactly one of a '{_WSID}' or a '{_WS}' parameter must be provided") - if not ws_id: - print(f"Translating workspace name {ws_name} to a workspace ID. Prefer submitting " - + "a workspace ID over a mutable workspace name that may cause race conditions") - ws_id = self.dfu.ws_name_to_id(ws_name) - mass_params = {_WSID: ws_id, _INPUTS: [inputs]} - return mass_params - - def _validate_mass_params(self, params): - ws_id = get_int(params.get(_WSID), _WSID) - if not ws_id: - raise ValueError(f"{_WSID} is required") - inputs = params.get(_INPUTS) - if not inputs or type(inputs) != list: - raise ValueError(f"{_INPUTS} field is required and must be a non-empty list") - for i, inp in enumerate(inputs, start=1): - if type(inp) != dict: - raise ValueError(f"Entry #{i} in {_INPUTS} field is not a mapping as required") - try: - self._validate_genome_input_params(inp) - except Exception as e: - raise ValueError(f"Entry #{i} in {_INPUTS} field has invalid params: {e}") from e - def _validate_genome_input_params(self, genome_input): """ Check required parameters are in genome_input @@ -236,7 +212,7 @@ def _save_genome_mass(self, params): data['warnings'] = self.validate_genome(data) # sort data - data = GenomeUtils.sort_dict(data) + data = sort_dict(data) # dump genome to scratch for upload data_path = os.path.join(self.scratch, name + ".json") json.dump(data, open(data_path, 'w')) @@ -311,9 +287,9 @@ def _update_genome(self, genome): # NOTE: Metagenome object does not have a 'taxon_assignments' field if 'taxon_assignments' in genome and genome['taxon_assignments'].get('ncbi'): tax_id = int(genome['taxon_assignments']['ncbi']) - GenomeUtils.set_taxon_data(tax_id, self.re_api_url, genome) + set_taxon_data(tax_id, self.re_api_url, genome) else: - GenomeUtils.set_default_taxon_data(genome) + set_default_taxon_data(genome) if any([x not in genome for x in ('dna_size', 'md5', 'gc_content', 'num_contigs')]): if 'assembly_ref' in genome: diff --git a/lib/GenomeFileUtil/core/GenomeUtils.py b/lib/GenomeFileUtil/core/GenomeUtils.py index 0ffeae29..d1b63935 100644 --- a/lib/GenomeFileUtil/core/GenomeUtils.py +++ b/lib/GenomeFileUtil/core/GenomeUtils.py @@ -3,13 +3,18 @@ import os import re import time +from typing import Callable, Dict, Any from relation_engine_client import REClient from relation_engine_client.exceptions import RENotFound +from GenomeFileUtil.core.MiscUtils import get_int # Name of the ncbi taxonomy namespace stored in "taxon_assignments" _NCBI_TAX = 'ncbi' +_WSID = 'workspace_id' +_INPUTS = 'inputs' + warnings = { "cds_excluded": "SUSPECT: CDS from {} was excluded because the associated " "CDS failed coordinates validation", @@ -482,4 +487,90 @@ def set_taxon_data(tax_id, re_api_url, genome_dict): ) # Assign the scientific name to the most specific (right-most) taxon in the lineage genome_dict['scientific_name'] = sciname - \ No newline at end of file + + +def set_up_single_params( + params: Dict[str, Any], + ws: str, + validate_params_func: Callable[[Dict[str, Any]], None], + ws_name_to_id_func: Callable[[str], int] +) -> Dict[str, Any]: + """ + Sets up parameters by validating them and ensuring that exactly one of workspace ID or name is provided. + + Args: + params (Dict[str, Any]): A dictionary where the keys are parameter names (strings) and the values + can be of any type. + ws (str): A string representing the key for the workspace name or identifier. + validate_params_func (Callable[[Dict[str, Any]], None]): A function that takes a dictionary of parameters + and validates them. This function should raise an exception if the parameters are invalid. + ws_name_to_id_func (Callable[[str], int]): A function that takes a workspace name (string) and returns + its corresponding ID (integer). + + Returns: + Dict[str, Any]: A dictionary containing the workspace ID and the processed parameters. The dictionary + has keys '_WSID' and '_INPUTS', where '_WSID' is the workspace ID and '_INPUTS' is a list containing + the input parameters. + + Raises: + ValueError: If neither or both the workspace ID and workspace name are provided in the parameters. + KeyError: If the workspace ID or name is missing or invalid. + + Notes: + - If a workspace ID is not provided, the function will attempt to convert the workspace name to an ID + using `ws_name_to_id_func`. + - It is preferable to provide a workspace ID directly to avoid potential race conditions with mutable + workspace names. + """ + inputs = dict(params) + validate_params_func(inputs) + ws_id = get_int(inputs.pop(_WSID, None), _WSID) + ws_name = inputs.pop(ws, None) + if bool(ws_id) == bool(ws_name): # xnor + raise ValueError(f"Exactly one of a '{_WSID}' or a '{ws}' parameter must be provided") + if not ws_id: + print(f"Translating workspace name {ws_name} to a workspace ID. Prefer submitting " + + "a workspace ID over a mutable workspace name that may cause race conditions") + ws_id = ws_name_to_id_func(ws_name) + mass_params = {_WSID: ws_id, _INPUTS: [inputs]} + return mass_params + + +def validate_mass_params( + params: Dict[str, Any], + validate_params_func: Callable[[Dict[str, Any]], None] +) -> None: + """ + Validates the provided parameters according to specific rules. + + Args: + params (Dict[str, Any]): A dictionary containing parameters to validate. Must include: + - _WSID: A workspace ID, which must be present and valid. + - _INPUTS: A list of parameter dictionaries, each of which must be validated by `validate_params_func`. + + validate_params_func (Callable[[Dict[str, Any]], None]): A function that takes a dictionary of parameters + and validates it. The function should raise an exception if the parameters are invalid. + + Raises: + ValueError: If `_WSID` is missing or invalid, if `_INPUTS` is missing or not a non-empty list, or if any + entry in `_INPUTS` is not a dictionary or fails validation. + + Notes: + - The function checks that `_WSID` is present and converts it to an integer using `get_int`. + - The `_INPUTS` field must be a non-empty list of dictionaries. Each dictionary in the list is validated + using `validate_params_func`. + - If any validation fails, a `ValueError` is raised with a message indicating the issue and entry index. + """ + ws_id = get_int(params.get(_WSID), _WSID) + if not ws_id: + raise ValueError(f"{_WSID} is required") + inputs = params.get(_INPUTS) + if not inputs or type(inputs) != list: + raise ValueError(f"{_INPUTS} field is required and must be a non-empty list") + for i, inp in enumerate(inputs, start=1): + if type(inp) != dict: + raise ValueError(f"Entry #{i} in {_INPUTS} field is not a mapping as required") + try: + validate_params_func(inp) + except Exception as e: + raise ValueError(f"Entry #{i} in {_INPUTS} field has invalid params: {e}") from e \ No newline at end of file diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 93b2ea31..e09547bb 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -234,42 +234,42 @@ def test_genomes_with_hidden(self): ret = self.genome_interface.save_genome_mass(params)[0] self.check_save_one_genome_output(ret, genome_name) - def test_bad_genomes_params_missing_wsid(self): - self.start_test() - invalidate_params = { - 'missing_workspace_id': 'workspace_id', - 'name': 'name', - 'data': 'data', - } - error_msg = "workspace_id is required" - self.fail_save_genome(invalidate_params, error_msg, mass=True) - - def test_bad_genomes_params_empty_inputs(self): - self.start_test() - invalidate_params = { - 'workspace_id': self.wsID, - 'inputs': [] - } - error_msg = "inputs field is required and must be a non-empty list" - self.fail_save_genome(invalidate_params, error_msg, mass=True) - - def test_bad_genomes_params_invalidate_entry_type(self): - self.start_test() - invalidate_params = { - 'workspace_id': self.wsID, - 'inputs': [['name', 'data']], - } - error_msg = "Entry #1 in inputs field is not a mapping as required" - self.fail_save_genome(invalidate_params, error_msg, mass=True) - - def test_bad_genomes_params_missing_parameter(self): - self.start_test() - invalidate_params = { - 'workspace_id': self.wsID, - 'inputs': [{'data': 'data'}], - } - error_msg = "Entry #1 in inputs field has invalid params: name parameter is required, but missing" - self.fail_save_genome(invalidate_params, error_msg, mass=True) + # def test_bad_genomes_params_missing_wsid(self): + # self.start_test() + # invalidate_params = { + # 'missing_workspace_id': 'workspace_id', + # 'name': 'name', + # 'data': 'data', + # } + # error_msg = "workspace_id is required" + # self.fail_save_genome(invalidate_params, error_msg, mass=True) + + # def test_bad_genomes_params_empty_inputs(self): + # self.start_test() + # invalidate_params = { + # 'workspace_id': self.wsID, + # 'inputs': [] + # } + # error_msg = "inputs field is required and must be a non-empty list" + # self.fail_save_genome(invalidate_params, error_msg, mass=True) + + # def test_bad_genomes_params_invalidate_entry_type(self): + # self.start_test() + # invalidate_params = { + # 'workspace_id': self.wsID, + # 'inputs': [['name', 'data']], + # } + # error_msg = "Entry #1 in inputs field is not a mapping as required" + # self.fail_save_genome(invalidate_params, error_msg, mass=True) + + # def test_bad_genomes_params_missing_parameter(self): + # self.start_test() + # invalidate_params = { + # 'workspace_id': self.wsID, + # 'inputs': [{'data': 'data'}], + # } + # error_msg = "Entry #1 in inputs field has invalid params: name parameter is required, but missing" + # self.fail_save_genome(invalidate_params, error_msg, mass=True) def test_GenomeInterface_check_dna_sequence_in_features(self): # no feature in genome From 4b1b88bc9e389ba6a8fd9a21b5a0903abb2f6578 Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 28 Aug 2024 16:21:33 -0700 Subject: [PATCH 10/70] remove redundant tests --- lib/GenomeFileUtil/core/GenomeInterface.py | 15 +++----- test/problematic_tests/save_genome_test.py | 44 ++++------------------ 2 files changed, 14 insertions(+), 45 deletions(-) diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index 33b0ff07..7f77218e 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -12,10 +12,7 @@ from installed_clients.AssemblySequenceAPIServiceClient import AssemblySequenceAPI from installed_clients.DataFileUtilClient import DataFileUtil from installed_clients.WSLargeDataIOClient import WsLargeDataIO -from GenomeFileUtil.core.GenomeUtils import ( - set_taxon_data, set_default_taxon_data, sort_dict, - set_up_single_params, validate_mass_params -) +from GenomeFileUtil.core import GenomeUtils MAX_GENOME_SIZE = 2**30 @@ -40,14 +37,14 @@ def __init__(self, config): self.ws_large_data = WsLargeDataIO(self.callback_url) def save_one_genome(self, params): - mass_params = set_up_single_params( + mass_params = GenomeUtils.set_up_single_params( params, _WS, self._validate_genome_input_params, self.dfu.ws_name_to_id ) return self._save_genome_mass(mass_params)[0] # NOTE If there is more than 1GB of data or more than 10,000 genomes to upload, the workspace will fail. def save_genome_mass(self, params): - validate_mass_params(params, self._validate_genome_input_params) + GenomeUtils.validate_mass_params(params, self._validate_genome_input_params) return self._save_genome_mass(params) def _validate_genome_input_params(self, genome_input): @@ -212,7 +209,7 @@ def _save_genome_mass(self, params): data['warnings'] = self.validate_genome(data) # sort data - data = sort_dict(data) + data = GenomeUtils.sort_dict(data) # dump genome to scratch for upload data_path = os.path.join(self.scratch, name + ".json") json.dump(data, open(data_path, 'w')) @@ -287,9 +284,9 @@ def _update_genome(self, genome): # NOTE: Metagenome object does not have a 'taxon_assignments' field if 'taxon_assignments' in genome and genome['taxon_assignments'].get('ncbi'): tax_id = int(genome['taxon_assignments']['ncbi']) - set_taxon_data(tax_id, self.re_api_url, genome) + GenomeUtils.set_taxon_data(tax_id, self.re_api_url, genome) else: - set_default_taxon_data(genome) + GenomeUtils.set_default_taxon_data(genome) if any([x not in genome for x in ('dna_size', 'md5', 'gc_content', 'num_contigs')]): if 'assembly_ref' in genome: diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index e09547bb..c3c0e017 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -234,42 +234,14 @@ def test_genomes_with_hidden(self): ret = self.genome_interface.save_genome_mass(params)[0] self.check_save_one_genome_output(ret, genome_name) - # def test_bad_genomes_params_missing_wsid(self): - # self.start_test() - # invalidate_params = { - # 'missing_workspace_id': 'workspace_id', - # 'name': 'name', - # 'data': 'data', - # } - # error_msg = "workspace_id is required" - # self.fail_save_genome(invalidate_params, error_msg, mass=True) - - # def test_bad_genomes_params_empty_inputs(self): - # self.start_test() - # invalidate_params = { - # 'workspace_id': self.wsID, - # 'inputs': [] - # } - # error_msg = "inputs field is required and must be a non-empty list" - # self.fail_save_genome(invalidate_params, error_msg, mass=True) - - # def test_bad_genomes_params_invalidate_entry_type(self): - # self.start_test() - # invalidate_params = { - # 'workspace_id': self.wsID, - # 'inputs': [['name', 'data']], - # } - # error_msg = "Entry #1 in inputs field is not a mapping as required" - # self.fail_save_genome(invalidate_params, error_msg, mass=True) - - # def test_bad_genomes_params_missing_parameter(self): - # self.start_test() - # invalidate_params = { - # 'workspace_id': self.wsID, - # 'inputs': [{'data': 'data'}], - # } - # error_msg = "Entry #1 in inputs field has invalid params: name parameter is required, but missing" - # self.fail_save_genome(invalidate_params, error_msg, mass=True) + def test_bad_genomes_params_missing_parameter(self): + self.start_test() + invalidate_params = { + 'workspace_id': self.wsID, + 'inputs': [{'data': 'data'}], + } + error_msg = "Entry #1 in inputs field has invalid params: name parameter is required, but missing" + self.fail_save_genome(invalidate_params, error_msg, mass=True) def test_GenomeInterface_check_dna_sequence_in_features(self): # no feature in genome From b56d77fb4b212bb2102e2e4a62371c751ba7edf2 Mon Sep 17 00:00:00 2001 From: Sijie Date: Tue, 3 Sep 2024 14:28:38 -0700 Subject: [PATCH 11/70] add test to cover the missing line --- test/problematic_tests/save_genome_test.py | 15 +++++++++++++++ 1 file changed, 15 insertions(+) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index c3c0e017..29d1754d 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -209,6 +209,21 @@ def test_genomes(self): ret = self.genome_interface.save_genome_mass(params)[0] self.check_save_one_genome_output(ret, genome_name) + def test_genomes_with_upgrade(self): + self.start_test() + genome_name = 'test_genome' + inputs = [ + { + 'name': genome_name, + 'data': self.test_genome_data, + 'ws_datatype': "KBaseMetagenomes.AnnotatedMetagenomeAssembly", + 'upgrade': True, + } + ] + params = {'workspace_id': self.wsID, 'inputs': inputs} + ret = self.genome_interface.save_genome_mass(params)[0] + self.check_save_one_genome_output(ret, genome_name) + def test_genomes_with_hidden(self): self.start_test() genome_name = 'test_genome_hidden' From 788c7ee524ee3e355c41ab89ac50093b8509ced0 Mon Sep 17 00:00:00 2001 From: Sijie Date: Tue, 3 Sep 2024 15:19:14 -0700 Subject: [PATCH 12/70] fix params name typo --- test/problematic_tests/save_genome_test.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 29d1754d..c453bc87 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -216,7 +216,7 @@ def test_genomes_with_upgrade(self): { 'name': genome_name, 'data': self.test_genome_data, - 'ws_datatype': "KBaseMetagenomes.AnnotatedMetagenomeAssembly", + 'workspace_datatype': "KBaseMetagenomes.AnnotatedMetagenomeAssembly", 'upgrade': True, } ] From 65467ea89c918b98d22bf3b55cb4578de0e6b634 Mon Sep 17 00:00:00 2001 From: Sijie Date: Thu, 5 Sep 2024 01:00:58 -0700 Subject: [PATCH 13/70] add metagenome json file && cover the missing line --- lib/GenomeFileUtil/core/GenomeInterface.py | 1 + test/data/metagenomes/toy/metagenome.json | 53 ++++++++++++++++++++++ test/problematic_tests/save_genome_test.py | 50 ++++++++++++++------ 3 files changed, 90 insertions(+), 14 deletions(-) create mode 100644 test/data/metagenomes/toy/metagenome.json diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index 7f77218e..07538bda 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -267,6 +267,7 @@ def _update_metagenome(self, genome): """Checks for missing required fields and fixes breaking changes""" if 'molecule_type' not in genome: genome['molecule_type'] = 'Unknown' + return genome def _update_genome(self, genome): """Checks for missing required fields and fixes breaking changes""" diff --git a/test/data/metagenomes/toy/metagenome.json b/test/data/metagenomes/toy/metagenome.json new file mode 100644 index 00000000..a3c8e5ba --- /dev/null +++ b/test/data/metagenomes/toy/metagenome.json @@ -0,0 +1,53 @@ +{ + "contig_ids": [ + "Ga0065724_100001" + ], + "contig_lengths": [ + 538871 + ], + "dna_size": 538871, + "domain": "Eukaryota", + "environment": null, + "external_source_origination_date": null, + "feature_counts": { + "CDS": 20, + "gene": 20, + "non_coding_features": 0, + "protein_encoding_gene": 20 + }, + "features_handle_ref": "KBH_736245", + "gc_content": 0.64469, + "genetic_code": 1, + "genome_type": "Metagenome", + "gff_handle_ref": "KBH_736244", + "id": "MyMetagenome", + "md5": "e2ccbd5a9bed0148015bd6b784e3c1c3", + "molecule_type": "SingleLetterAlphabet", + "notes": null, + "num_contigs": 1, + "num_features": 40, + "ontologies_present": {}, + "ontology_events": [ + { + "id": "GO", + "method": "GenomeFileUtils Genbank uploader from annotations", + "method_version": "0.11.7", + "ontology_ref": "KBaseOntology/gene_ontology", + "timestamp": "2024_09_05_06_45_31" + } + ], + "original_source_file_name": null, + "protein_handle_ref": "KBH_736243", + "publications": [], + "scientific_name": "Arabidopsis thaliana", + "source": "GFF", + "source_id": "unknown", + "suspect": 1, + "taxon_assignments": { + "ncbi": "3702" + }, + "taxonomy": "cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis", + "warnings": [ + "SUSPECT: This genome has 20 genes that needed to be spoofed for existing parentless CDS." + ] +} \ No newline at end of file diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index c453bc87..5380738c 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -23,6 +23,9 @@ from GenomeFileUtil.core.GenomeInterface import GenomeInterface from installed_clients.WorkspaceClient import Workspace as workspaceService +KBASE_GENOME = "KBaseGenomes.Genome" +KBASE_METAGENOME = "KBaseMetagenomes.AnnotatedMetagenomeAssembly" + class SaveGenomeTest(unittest.TestCase): @@ -115,17 +118,36 @@ def delete_shock_node(cls, node_id): @classmethod def prepare_data(cls): - assembly_file_path = os.path.join(cls.scratch, - 'e_coli_assembly.fasta') + + assembly_file_path = os.path.join(cls.scratch,'e_coli_assembly.fasta') + meta_file_path = os.path.join(cls.scratch,'metagenome.fa') + shutil.copy('data/e_coli/e_coli_assembly.fasta', assembly_file_path) + shutil.copy('data/metagenomes/toy/metagenome.fa', meta_file_path) + au = AssemblyUtil(os.environ['SDK_CALLBACK_URL']) - assembly_ref = au.save_assembly_from_fasta({ - 'workspace_name': cls.wsName, - 'assembly_name': 'e_coli.assembly', - 'file': {'path': assembly_file_path} - }) + + assembly_refs = au.save_assemblies_from_fastas( + { + 'workspace_id': cls.wsID, + 'inputs': [ + { + 'assembly_name': 'e_coli.assembly', + 'file': assembly_file_path + }, + { + 'assembly_name': 'metagenome.assembly', + 'file': meta_file_path + } + ] + } + )["results"] + cls.test_genome_data = json.load(open('data/e_coli/e_coli.json')) - cls.test_genome_data['assembly_ref'] = assembly_ref + cls.test_genome_data['assembly_ref'] = assembly_refs[0]["upa"] + + cls.test_metagenome_data = json.load(open('data/metagenomes/toy/metagenome.json')) + cls.test_metagenome_data['assembly_ref'] = assembly_refs[1]["upa"] def getWsClient(self): return self.__class__.wsClient @@ -154,12 +176,12 @@ def fail_save_genome(self, params, error, exception=ValueError, contains=False, else: self.assertEqual(error, str(context.exception)) - def check_save_one_genome_output(self, ret, genome_name): + def check_save_one_genome_output(self, ret, genome_name, data_type=KBASE_GENOME): self.assertTrue('info' in ret) genome_info = ret['info'] self.assertEqual(genome_info[1], genome_name) - self.assertEqual(genome_info[2].split('-')[0], 'KBaseGenomes.Genome') + self.assertEqual(genome_info[2].split('-')[0], data_type) self.assertEqual(genome_info[5], self.user_id) def test_bad_one_genome_params(self): @@ -211,18 +233,18 @@ def test_genomes(self): def test_genomes_with_upgrade(self): self.start_test() - genome_name = 'test_genome' + genome_name = 'MyMetagenome' inputs = [ { 'name': genome_name, - 'data': self.test_genome_data, - 'workspace_datatype': "KBaseMetagenomes.AnnotatedMetagenomeAssembly", + 'data': self.test_metagenome_data, + 'workspace_datatype': KBASE_METAGENOME, 'upgrade': True, } ] params = {'workspace_id': self.wsID, 'inputs': inputs} ret = self.genome_interface.save_genome_mass(params)[0] - self.check_save_one_genome_output(ret, genome_name) + self.check_save_one_genome_output(ret, genome_name, data_type=KBASE_METAGENOME) def test_genomes_with_hidden(self): self.start_test() From 66af0b756a8c19fe17cca9afdcc024fe3f56bef5 Mon Sep 17 00:00:00 2001 From: Sijie Date: Thu, 5 Sep 2024 08:13:12 -0700 Subject: [PATCH 14/70] rm gff_handle_ref --- test/data/metagenomes/toy/metagenome.json | 1 - 1 file changed, 1 deletion(-) diff --git a/test/data/metagenomes/toy/metagenome.json b/test/data/metagenomes/toy/metagenome.json index a3c8e5ba..57e42815 100644 --- a/test/data/metagenomes/toy/metagenome.json +++ b/test/data/metagenomes/toy/metagenome.json @@ -19,7 +19,6 @@ "gc_content": 0.64469, "genetic_code": 1, "genome_type": "Metagenome", - "gff_handle_ref": "KBH_736244", "id": "MyMetagenome", "md5": "e2ccbd5a9bed0148015bd6b784e3c1c3", "molecule_type": "SingleLetterAlphabet", From fcbb510713e34b932c216082ebc04d3d4d1e0118 Mon Sep 17 00:00:00 2001 From: Sijie Date: Mon, 9 Sep 2024 17:37:22 -0700 Subject: [PATCH 15/70] add features_handle_ref && protein_handle_ref before upload --- test/data/metagenomes/toy/features_handle_ref | 1 + test/data/metagenomes/toy/metagenome.json | 2 -- test/data/metagenomes/toy/protein_handle_ref | 1 + test/problematic_tests/save_genome_test.py | 23 +++++++++++++++++++ 4 files changed, 25 insertions(+), 2 deletions(-) create mode 100644 test/data/metagenomes/toy/features_handle_ref create mode 100644 test/data/metagenomes/toy/protein_handle_ref diff --git a/test/data/metagenomes/toy/features_handle_ref b/test/data/metagenomes/toy/features_handle_ref new file mode 100644 index 00000000..f67a087d --- /dev/null +++ b/test/data/metagenomes/toy/features_handle_ref @@ -0,0 +1 @@ +test features_handle_ref \ No newline at end of file diff --git a/test/data/metagenomes/toy/metagenome.json b/test/data/metagenomes/toy/metagenome.json index 57e42815..95c23ef8 100644 --- a/test/data/metagenomes/toy/metagenome.json +++ b/test/data/metagenomes/toy/metagenome.json @@ -15,7 +15,6 @@ "non_coding_features": 0, "protein_encoding_gene": 20 }, - "features_handle_ref": "KBH_736245", "gc_content": 0.64469, "genetic_code": 1, "genome_type": "Metagenome", @@ -36,7 +35,6 @@ } ], "original_source_file_name": null, - "protein_handle_ref": "KBH_736243", "publications": [], "scientific_name": "Arabidopsis thaliana", "source": "GFF", diff --git a/test/data/metagenomes/toy/protein_handle_ref b/test/data/metagenomes/toy/protein_handle_ref new file mode 100644 index 00000000..4e4a8e1f --- /dev/null +++ b/test/data/metagenomes/toy/protein_handle_ref @@ -0,0 +1 @@ +test protein_handle_ref \ No newline at end of file diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 5380738c..70eff5c1 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -149,6 +149,29 @@ def prepare_data(cls): cls.test_metagenome_data = json.load(open('data/metagenomes/toy/metagenome.json')) cls.test_metagenome_data['assembly_ref'] = assembly_refs[1]["upa"] + # Move files to the share folder + fhr_path = os.path.join(cls.scratch,'features_handle_ref') + phr_path = os.path.join(cls.scratch,'protein_handle_ref') + + shutil.copy('data/metagenomes/toy/features_handle_ref', fhr_path) + shutil.copy('data/metagenomes/toy/protein_handle_ref', phr_path) + + # Upload files to the blobstore + handle_service_outputs = cls.dfu.file_to_shock_mass( + [ + {'file_path': fhr_path, 'make_handle': 1, 'pack': 'gzip'}, + {'file_path': phr_path, 'make_handle': 1, 'pack': 'gzip'} + ] + ) + + # Update metagenome + cls.test_metagenome_data["features_handle_ref"] = handle_service_outputs[0]["handle"]["hid"] + cls.test_metagenome_data["protein_handle_ref"]= handle_service_outputs[1]["handle"]["hid"] + + # Delete shock_ids + cls.nodes_to_delete.append(handle_service_outputs[0]["shock_id"]) + cls.nodes_to_delete.append(handle_service_outputs[1]["shock_id"]) + def getWsClient(self): return self.__class__.wsClient From 32f96a04a98f333e79d315b0b302b75d9eab98c7 Mon Sep 17 00:00:00 2001 From: Sijie Date: Tue, 10 Sep 2024 16:06:14 -0700 Subject: [PATCH 16/70] add boolean flag for validate_genome --- lib/GenomeFileUtil/core/GenbankToGenome.py | 6 ++++++ lib/GenomeFileUtil/core/GenomeInterface.py | 17 +++++++---------- test/problematic_tests/save_genome_test.py | 4 ++-- 3 files changed, 15 insertions(+), 12 deletions(-) diff --git a/lib/GenomeFileUtil/core/GenbankToGenome.py b/lib/GenomeFileUtil/core/GenbankToGenome.py index ffdd55c3..d5e42b55 100644 --- a/lib/GenomeFileUtil/core/GenbankToGenome.py +++ b/lib/GenomeFileUtil/core/GenbankToGenome.py @@ -162,6 +162,12 @@ def _import_genbank_mass(self, params): # parse genbank file self._parse_genbank(genome_obj) + # check features + self.gi.check_dna_sequence_in_features(genome_obj.genome_data) + + # validate genome + genome_obj.genome_data['warnings'] = self.gi.validate_genome(genome_obj.genome_data) + # gather all objects genome_objs.append(genome_obj) diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index 07538bda..cec2b3e3 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -43,9 +43,9 @@ def save_one_genome(self, params): return self._save_genome_mass(mass_params)[0] # NOTE If there is more than 1GB of data or more than 10,000 genomes to upload, the workspace will fail. - def save_genome_mass(self, params): + def save_genome_mass(self, params, validate_genome=False): GenomeUtils.validate_mass_params(params, self._validate_genome_input_params) - return self._save_genome_mass(params) + return self._save_genome_mass(params, validate_genome=validate_genome) def _validate_genome_input_params(self, genome_input): """ @@ -128,11 +128,10 @@ def _own_handle(self, genome_data, handle_property): handle_id = dfu_shock['handle']['hid'] genome_data[handle_property] = handle_id - def _check_dna_sequence_in_features(self, genome): + def check_dna_sequence_in_features(self, genome): """ - _check_dna_sequence_in_features: check dna sequence in each feature + check_dna_sequence_in_features: check dna sequence in each feature """ - logging.info('start checking dna sequence in each feature') if 'features' in genome: features_to_work = {} @@ -166,7 +165,7 @@ def get_one_genome(self, params): return data, res['info'] # return self.dfu.get_objects(params)['data'][0] - def _save_genome_mass(self, params): + def _save_genome_mass(self, params, validate_genome=True): workspace_id = params[_WSID] inputs = params[_INPUTS] @@ -204,8 +203,8 @@ def _save_genome_mass(self, params): # check all handles point to shock nodes owned by calling user self._own_handle(data, 'genbank_handle_ref') self._own_handle(data, 'gff_handle_ref') - if "AnnotatedMetagenomeAssembly" not in ws_datatype: - self._check_dna_sequence_in_features(data) + if "AnnotatedMetagenomeAssembly" not in ws_datatype and validate_genome: + self.check_dna_sequence_in_features(data) data['warnings'] = self.validate_genome(data) # sort data @@ -406,8 +405,6 @@ def validate_genome(g): """ allowed_tiers = {'Representative', 'Reference', 'ExternalDB', 'User'} - - logging.info('Validating genome object contents') warnings = g.get('warnings', []) # TODO: Determine whether these checks make any sense for Metagenome diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 70eff5c1..f45944ae 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -307,7 +307,7 @@ def test_GenomeInterface_check_dna_sequence_in_features(self): # no feature in genome genome = {'missing_features': 'features'} copied_genome = genome.copy() - self.genome_interface._check_dna_sequence_in_features(copied_genome) + self.genome_interface.check_dna_sequence_in_features(copied_genome) self.assertEqual(copied_genome, genome) # with contigs @@ -315,7 +315,7 @@ def test_GenomeInterface_check_dna_sequence_in_features(self): for feat in copied_genome['features']: if 'dna_sequence' in feat: del feat['dna_sequence'] - self.genome_interface._check_dna_sequence_in_features(copied_genome) + self.genome_interface.check_dna_sequence_in_features(copied_genome) feature_dna_sum = 0 for feature in copied_genome['features']: From 41eed0b037601d6b33775f6674fb9002eb62be9d Mon Sep 17 00:00:00 2001 From: Sijie Date: Tue, 10 Sep 2024 17:10:43 -0700 Subject: [PATCH 17/70] test validate_genome boolean flag --- test/problematic_tests/save_genome_test.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index f45944ae..e13d415d 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -251,7 +251,7 @@ def test_genomes(self): } ] params = {'workspace_id': self.wsID, 'inputs': inputs} - ret = self.genome_interface.save_genome_mass(params)[0] + ret = self.genome_interface.save_genome_mass(params, validate_genome=True)[0] self.check_save_one_genome_output(ret, genome_name) def test_genomes_with_upgrade(self): From 71670bce3fd95445172e415c6167a0471cd697f6 Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 11 Sep 2024 16:09:33 -0700 Subject: [PATCH 18/70] 1. add pydoc for save_genme_mass; 2. make the dicts in the _save_genome_mass loop; 3. make the note much more explicit --- lib/GenomeFileUtil/core/GenomeInterface.py | 97 ++++++++++++---------- 1 file changed, 51 insertions(+), 46 deletions(-) diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index cec2b3e3..8e74c53d 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -37,13 +37,48 @@ def __init__(self, config): self.ws_large_data = WsLargeDataIO(self.callback_url) def save_one_genome(self, params): + """ + Saves a single genome object to the workspace. + + This method prepares the parameters for saving a single genome and calls the + `_save_genome_mass` method to handle the actual saving process. It processes + the input parameters and performs necessary validation before saving the genome. + + Args: + params (dict): A dictionary containing the parameters for saving the genome. + Must include workspace and genome-specific information. + + Returns: + dict: The information about the saved genome object, including metadata. + The return value is derived from the `_save_genome_mass` method. + """ mass_params = GenomeUtils.set_up_single_params( params, _WS, self._validate_genome_input_params, self.dfu.ws_name_to_id ) return self._save_genome_mass(mass_params)[0] - # NOTE If there is more than 1GB of data or more than 10,000 genomes to upload, the workspace will fail. def save_genome_mass(self, params, validate_genome=False): + """ + Saves multiple genome objects to the workspace. + + This method handles the saving of multiple genome objects in bulk. It validates + the parameters, processes each genome individually, and performs necessary + updates or validations before saving. If requested, it will also validate the + genomes before saving. + + # NOTE If there is more than 1GB of data or more than 10,000 genomes to upload, + # the workspace will fail. + + Args: + params (dict): A dictionary containing the parameters for saving the genomes. + Should include workspace ID and a list of genome inputs with their data. + validate_genome (bool, optional): A flag indicating whether to validate the + genomes before saving. Defaults to False. + + Returns: + list: A list of dictionaries, each containing information about a saved + genome object and any warnings encountered during the saving process. + """ GenomeUtils.validate_mass_params(params, self._validate_genome_input_params) return self._save_genome_mass(params, validate_genome=validate_genome) @@ -56,33 +91,6 @@ def _validate_genome_input_params(self, genome_input): if p not in genome_input: raise ValueError(f"{p} parameter is required, but missing") - def _save_genome_objects( - self, - workspace_id, - ws_datatypes, - data_paths, - names, - meta_data, - hidden_data, - ): - dfu_infos = self.ws_large_data.save_objects( - { - 'id': workspace_id, - 'objects': [ - { - 'type': ws_datatype, - 'data_json_file': data_path, - 'name': name, - 'meta': meta, - 'hidden': hidden, - } for ws_datatype, data_path, name, meta, hidden in zip( - ws_datatypes, data_paths, names, meta_data, hidden_data - ) - ] - } - ) - return dfu_infos - def _check_shock_response(self, response, errtxt): """ _check_shock_response: check shock node response (Copied from DataFileUtil) @@ -170,28 +178,28 @@ def _save_genome_mass(self, params, validate_genome=True): workspace_id = params[_WSID] inputs = params[_INPUTS] - ws_datatypes = [] - data_paths = [] - names = [] - meta_data = [] - hidden_data = [] + objects = [] warnings = [] for input_params in inputs: + obj = {} + # retrive required params name = input_params['name'] data = input_params['data'] # XXX there is no `workspace_datatype` param in the spec - # NOTE: The method caller should not be able to choose an arbitrary workspace type + # NOTE: This allows a user to specify any arbitrary workspace type which could cause, + # in the worst case, data corruption. It should be removed from the API + # (note it is not currently documented) so users cannot access it. ws_datatype = input_params.get('workspace_datatype', "KBaseGenomes.Genome") # XXX there is no `meta` param in the spec meta = input_params.get('meta', {}) - ws_datatypes.append(ws_datatype) - names.append(name) - meta_data.append(meta) + obj["type"] = ws_datatype + obj["name"] = name + obj["meta"] = meta if "AnnotatedMetagenomeAssembly" in ws_datatype: if input_params.get('upgrade') or 'feature_counts' not in data: @@ -217,17 +225,14 @@ def _save_genome_mass(self, params, validate_genome=True): else: hidden = 0 - data_paths.append(data_path) - hidden_data.append(hidden) + obj["data_json_file"] = data_path + obj["hidden"] = hidden + + objects.append(obj) warnings.append(data.get('warnings', [])) - dfu_infos = self._save_genome_objects( - workspace_id, - ws_datatypes, - data_paths, - names, - meta_data, - hidden_data, + dfu_infos = self.ws_large_data.save_objects( + {'id': workspace_id, 'objects': objects} ) output = [ From 0cbe1551b827ac860afcccaf02fa134208a45308 Mon Sep 17 00:00:00 2001 From: Sijie Date: Thu, 12 Sep 2024 17:22:54 -0700 Subject: [PATCH 19/70] update release notes && remove tiny files --- RELEASE_NOTES.md | 1 - test/data/metagenomes/toy/features_handle_ref | 1 - test/data/metagenomes/toy/protein_handle_ref | 1 - test/problematic_tests/save_genome_test.py | 19 ++++++++++++++++--- 4 files changed, 16 insertions(+), 6 deletions(-) delete mode 100644 test/data/metagenomes/toy/features_handle_ref delete mode 100644 test/data/metagenomes/toy/protein_handle_ref diff --git a/RELEASE_NOTES.md b/RELEASE_NOTES.md index c0e69fda..c020b8f0 100644 --- a/RELEASE_NOTES.md +++ b/RELEASE_NOTES.md @@ -6,7 +6,6 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). ## [0.11.7] - TBD -- Genomes are now saved in batches to the workspace - Unusable `export_genome_features_protein_to_fasta` function was removed - The `genbanks_to_genomes` method was added to allow users to upload multiple genome objects at once diff --git a/test/data/metagenomes/toy/features_handle_ref b/test/data/metagenomes/toy/features_handle_ref deleted file mode 100644 index f67a087d..00000000 --- a/test/data/metagenomes/toy/features_handle_ref +++ /dev/null @@ -1 +0,0 @@ -test features_handle_ref \ No newline at end of file diff --git a/test/data/metagenomes/toy/protein_handle_ref b/test/data/metagenomes/toy/protein_handle_ref deleted file mode 100644 index 4e4a8e1f..00000000 --- a/test/data/metagenomes/toy/protein_handle_ref +++ /dev/null @@ -1 +0,0 @@ -test protein_handle_ref \ No newline at end of file diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index e13d415d..1c4644aa 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -4,6 +4,7 @@ import json # noqa: F401 import os # noqa: F401 import shutil +import tempfile import time import unittest import urllib.error @@ -149,12 +150,20 @@ def prepare_data(cls): cls.test_metagenome_data = json.load(open('data/metagenomes/toy/metagenome.json')) cls.test_metagenome_data['assembly_ref'] = assembly_refs[1]["upa"] - # Move files to the share folder + # Set taregt paths in the share folder fhr_path = os.path.join(cls.scratch,'features_handle_ref') phr_path = os.path.join(cls.scratch,'protein_handle_ref') - shutil.copy('data/metagenomes/toy/features_handle_ref', fhr_path) - shutil.copy('data/metagenomes/toy/protein_handle_ref', phr_path) + # Create temp files + with tempfile.NamedTemporaryFile(delete=False, mode='w', encoding='utf-8') as temp_features_file: + temp_features_file.write("test features_handle_ref") + + with tempfile.NamedTemporaryFile(delete=False, mode='w', encoding='utf-8') as temp_protein_file: + temp_protein_file.write("test protein_handle_ref") + + # Move files to the share folder + shutil.copy(temp_features_file.name, fhr_path) + shutil.copy(temp_protein_file.name, phr_path) # Upload files to the blobstore handle_service_outputs = cls.dfu.file_to_shock_mass( @@ -172,6 +181,10 @@ def prepare_data(cls): cls.nodes_to_delete.append(handle_service_outputs[0]["shock_id"]) cls.nodes_to_delete.append(handle_service_outputs[1]["shock_id"]) + # Remove temp files + os.remove(temp_features_file.name) + os.remove(temp_protein_file.name) + def getWsClient(self): return self.__class__.wsClient From 52e280d6b26116cb2d353f168cd54ff787297376 Mon Sep 17 00:00:00 2001 From: Sijie Date: Tue, 17 Sep 2024 15:22:36 -0700 Subject: [PATCH 20/70] add more info and warnings checks in test --- lib/GenomeFileUtil/core/GenomeInterface.py | 2 +- test/problematic_tests/save_genome_test.py | 40 ++++++++++++++++++---- 2 files changed, 34 insertions(+), 8 deletions(-) diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index 8e74c53d..1bcac050 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -187,7 +187,7 @@ def _save_genome_mass(self, params, validate_genome=True): # retrive required params name = input_params['name'] - data = input_params['data'] + data = dict(input_params['data']) # XXX there is no `workspace_datatype` param in the spec # NOTE: This allows a user to specify any arbitrary workspace type which could cause, diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 1c4644aa..648a36a6 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -12,6 +12,7 @@ import urllib.request from configparser import ConfigParser from os import environ +from datetime import datetime import requests # noqa: F401 @@ -24,8 +25,17 @@ from GenomeFileUtil.core.GenomeInterface import GenomeInterface from installed_clients.WorkspaceClient import Workspace as workspaceService -KBASE_GENOME = "KBaseGenomes.Genome" -KBASE_METAGENOME = "KBaseMetagenomes.AnnotatedMetagenomeAssembly" +_KBASE_GENOME = "KBaseGenomes.Genome" +_KBASE_METAGENOME = "KBaseMetagenomes.AnnotatedMetagenomeAssembly" + +_GENOME_FILE_WARNINGS = [ + 'For prokaryotes, CDS array should generally be the same length as the Features array.', + 'Genome molecule_type Unknown is not expected for domain Bacteria.', + 'Unable to determine organism taxonomy' +] +_METAGENOME_FILE_WARNINGS = [ + 'SUSPECT: This genome has 20 genes that needed to be spoofed for existing parentless CDS.' +] class SaveGenomeTest(unittest.TestCase): @@ -212,13 +222,27 @@ def fail_save_genome(self, params, error, exception=ValueError, contains=False, else: self.assertEqual(error, str(context.exception)) - def check_save_one_genome_output(self, ret, genome_name, data_type=KBASE_GENOME): + def check_save_one_genome_output( + self, + ret, + genome_name, + data_type=_KBASE_GENOME, + warnings=_GENOME_FILE_WARNINGS + ): self.assertTrue('info' in ret) + self.assertTrue('warnings' in ret) + # Check info genome_info = ret['info'] self.assertEqual(genome_info[1], genome_name) self.assertEqual(genome_info[2].split('-')[0], data_type) + self.assertTrue(datetime.strptime(genome_info[3], '%Y-%m-%dT%H:%M:%S+%f')) self.assertEqual(genome_info[5], self.user_id) + self.assertEqual(genome_info[6], self.wsID) + self.assertEqual(genome_info[7], self.wsName) + + # Check warnings + self.assertEqual(ret['warnings'], warnings) def test_bad_one_genome_params(self): self.start_test() @@ -274,13 +298,15 @@ def test_genomes_with_upgrade(self): { 'name': genome_name, 'data': self.test_metagenome_data, - 'workspace_datatype': KBASE_METAGENOME, + 'workspace_datatype': _KBASE_METAGENOME, 'upgrade': True, } ] params = {'workspace_id': self.wsID, 'inputs': inputs} ret = self.genome_interface.save_genome_mass(params)[0] - self.check_save_one_genome_output(ret, genome_name, data_type=KBASE_METAGENOME) + self.check_save_one_genome_output( + ret, genome_name, data_type=_KBASE_METAGENOME, warnings=_METAGENOME_FILE_WARNINGS + ) def test_genomes_with_hidden(self): self.start_test() @@ -294,7 +320,7 @@ def test_genomes_with_hidden(self): ] params = {'workspace_id': self.wsID, 'inputs': inputs} ret = self.genome_interface.save_genome_mass(params)[0] - self.check_save_one_genome_output(ret, genome_name) + self.check_save_one_genome_output(ret, genome_name, warnings=[]) inputs = [ { @@ -305,7 +331,7 @@ def test_genomes_with_hidden(self): ] params = {'workspace_id': self.wsID, 'inputs': inputs} ret = self.genome_interface.save_genome_mass(params)[0] - self.check_save_one_genome_output(ret, genome_name) + self.check_save_one_genome_output(ret, genome_name, warnings=[]) def test_bad_genomes_params_missing_parameter(self): self.start_test() From f018f0e7ab09f39b535e54c84e8e5f090d6cee9d Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 18 Sep 2024 21:40:19 -0700 Subject: [PATCH 21/70] remove metagenome from test --- lib/GenomeFileUtil/core/GenomeInterface.py | 11 +-- test/data/metagenomes/toy/metagenome.json | 50 ------------ test/problematic_tests/save_genome_test.py | 89 ++-------------------- 3 files changed, 7 insertions(+), 143 deletions(-) delete mode 100644 test/data/metagenomes/toy/metagenome.json diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index 1bcac050..0265dd6a 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -201,10 +201,7 @@ def _save_genome_mass(self, params, validate_genome=True): obj["name"] = name obj["meta"] = meta - if "AnnotatedMetagenomeAssembly" in ws_datatype: - if input_params.get('upgrade') or 'feature_counts' not in data: - data = self._update_metagenome(data) - else: + if "AnnotatedMetagenomeAssembly" not in ws_datatype: if input_params.get('upgrade') or 'feature_counts' not in data: data = self._update_genome(data) @@ -267,12 +264,6 @@ def determine_tier(source): return "Ensembl", ['Representative', 'ExternalDB'] return source, ['User'] - def _update_metagenome(self, genome): - """Checks for missing required fields and fixes breaking changes""" - if 'molecule_type' not in genome: - genome['molecule_type'] = 'Unknown' - return genome - def _update_genome(self, genome): """Checks for missing required fields and fixes breaking changes""" # do top level updates diff --git a/test/data/metagenomes/toy/metagenome.json b/test/data/metagenomes/toy/metagenome.json deleted file mode 100644 index 95c23ef8..00000000 --- a/test/data/metagenomes/toy/metagenome.json +++ /dev/null @@ -1,50 +0,0 @@ -{ - "contig_ids": [ - "Ga0065724_100001" - ], - "contig_lengths": [ - 538871 - ], - "dna_size": 538871, - "domain": "Eukaryota", - "environment": null, - "external_source_origination_date": null, - "feature_counts": { - "CDS": 20, - "gene": 20, - "non_coding_features": 0, - "protein_encoding_gene": 20 - }, - "gc_content": 0.64469, - "genetic_code": 1, - "genome_type": "Metagenome", - "id": "MyMetagenome", - "md5": "e2ccbd5a9bed0148015bd6b784e3c1c3", - "molecule_type": "SingleLetterAlphabet", - "notes": null, - "num_contigs": 1, - "num_features": 40, - "ontologies_present": {}, - "ontology_events": [ - { - "id": "GO", - "method": "GenomeFileUtils Genbank uploader from annotations", - "method_version": "0.11.7", - "ontology_ref": "KBaseOntology/gene_ontology", - "timestamp": "2024_09_05_06_45_31" - } - ], - "original_source_file_name": null, - "publications": [], - "scientific_name": "Arabidopsis thaliana", - "source": "GFF", - "source_id": "unknown", - "suspect": 1, - "taxon_assignments": { - "ncbi": "3702" - }, - "taxonomy": "cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis", - "warnings": [ - "SUSPECT: This genome has 20 genes that needed to be spoofed for existing parentless CDS." - ] -} \ No newline at end of file diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 648a36a6..a396c5ba 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -26,16 +26,11 @@ from installed_clients.WorkspaceClient import Workspace as workspaceService _KBASE_GENOME = "KBaseGenomes.Genome" -_KBASE_METAGENOME = "KBaseMetagenomes.AnnotatedMetagenomeAssembly" - _GENOME_FILE_WARNINGS = [ 'For prokaryotes, CDS array should generally be the same length as the Features array.', 'Genome molecule_type Unknown is not expected for domain Bacteria.', 'Unable to determine organism taxonomy' ] -_METAGENOME_FILE_WARNINGS = [ - 'SUSPECT: This genome has 20 genes that needed to be spoofed for existing parentless CDS.' -] class SaveGenomeTest(unittest.TestCase): @@ -129,71 +124,16 @@ def delete_shock_node(cls, node_id): @classmethod def prepare_data(cls): - assembly_file_path = os.path.join(cls.scratch,'e_coli_assembly.fasta') - meta_file_path = os.path.join(cls.scratch,'metagenome.fa') - shutil.copy('data/e_coli/e_coli_assembly.fasta', assembly_file_path) - shutil.copy('data/metagenomes/toy/metagenome.fa', meta_file_path) - au = AssemblyUtil(os.environ['SDK_CALLBACK_URL']) - - assembly_refs = au.save_assemblies_from_fastas( - { - 'workspace_id': cls.wsID, - 'inputs': [ - { - 'assembly_name': 'e_coli.assembly', - 'file': assembly_file_path - }, - { - 'assembly_name': 'metagenome.assembly', - 'file': meta_file_path - } - ] - } - )["results"] - + assembly_ref = au.save_assembly_from_fasta({ + 'workspace_name': cls.wsName, + 'assembly_name': 'e_coli.assembly', + 'file': {'path': assembly_file_path} + }) cls.test_genome_data = json.load(open('data/e_coli/e_coli.json')) - cls.test_genome_data['assembly_ref'] = assembly_refs[0]["upa"] - - cls.test_metagenome_data = json.load(open('data/metagenomes/toy/metagenome.json')) - cls.test_metagenome_data['assembly_ref'] = assembly_refs[1]["upa"] - - # Set taregt paths in the share folder - fhr_path = os.path.join(cls.scratch,'features_handle_ref') - phr_path = os.path.join(cls.scratch,'protein_handle_ref') - - # Create temp files - with tempfile.NamedTemporaryFile(delete=False, mode='w', encoding='utf-8') as temp_features_file: - temp_features_file.write("test features_handle_ref") - - with tempfile.NamedTemporaryFile(delete=False, mode='w', encoding='utf-8') as temp_protein_file: - temp_protein_file.write("test protein_handle_ref") - - # Move files to the share folder - shutil.copy(temp_features_file.name, fhr_path) - shutil.copy(temp_protein_file.name, phr_path) - - # Upload files to the blobstore - handle_service_outputs = cls.dfu.file_to_shock_mass( - [ - {'file_path': fhr_path, 'make_handle': 1, 'pack': 'gzip'}, - {'file_path': phr_path, 'make_handle': 1, 'pack': 'gzip'} - ] - ) - - # Update metagenome - cls.test_metagenome_data["features_handle_ref"] = handle_service_outputs[0]["handle"]["hid"] - cls.test_metagenome_data["protein_handle_ref"]= handle_service_outputs[1]["handle"]["hid"] - - # Delete shock_ids - cls.nodes_to_delete.append(handle_service_outputs[0]["shock_id"]) - cls.nodes_to_delete.append(handle_service_outputs[1]["shock_id"]) - - # Remove temp files - os.remove(temp_features_file.name) - os.remove(temp_protein_file.name) + cls.test_genome_data['assembly_ref'] = assembly_ref def getWsClient(self): return self.__class__.wsClient @@ -291,23 +231,6 @@ def test_genomes(self): ret = self.genome_interface.save_genome_mass(params, validate_genome=True)[0] self.check_save_one_genome_output(ret, genome_name) - def test_genomes_with_upgrade(self): - self.start_test() - genome_name = 'MyMetagenome' - inputs = [ - { - 'name': genome_name, - 'data': self.test_metagenome_data, - 'workspace_datatype': _KBASE_METAGENOME, - 'upgrade': True, - } - ] - params = {'workspace_id': self.wsID, 'inputs': inputs} - ret = self.genome_interface.save_genome_mass(params)[0] - self.check_save_one_genome_output( - ret, genome_name, data_type=_KBASE_METAGENOME, warnings=_METAGENOME_FILE_WARNINGS - ) - def test_genomes_with_hidden(self): self.start_test() genome_name = 'test_genome_hidden' From 54fedf0a3620a71458812bdfcd8b07267fdc34fa Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 18 Sep 2024 21:42:51 -0700 Subject: [PATCH 22/70] remove unused lib --- test/problematic_tests/save_genome_test.py | 1 - 1 file changed, 1 deletion(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index a396c5ba..c2e51b46 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -4,7 +4,6 @@ import json # noqa: F401 import os # noqa: F401 import shutil -import tempfile import time import unittest import urllib.error From 861a50b5ce2d0b8b481fe514b41a6d6b89ee0c96 Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 30 Oct 2024 16:35:38 -0700 Subject: [PATCH 23/70] fix documentation --- lib/GenomeFileUtil/core/GenomeInterface.py | 6 ++---- lib/GenomeFileUtil/core/GenomeUtils.py | 19 +++++++++---------- 2 files changed, 11 insertions(+), 14 deletions(-) diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index 0265dd6a..e16b12e1 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -40,9 +40,8 @@ def save_one_genome(self, params): """ Saves a single genome object to the workspace. - This method prepares the parameters for saving a single genome and calls the - `_save_genome_mass` method to handle the actual saving process. It processes - the input parameters and performs necessary validation before saving the genome. + This method prepares and validates the necessary parameters for saving a genome. + It then executes the saving process and returns relevant information about the saved genome. Args: params (dict): A dictionary containing the parameters for saving the genome. @@ -50,7 +49,6 @@ def save_one_genome(self, params): Returns: dict: The information about the saved genome object, including metadata. - The return value is derived from the `_save_genome_mass` method. """ mass_params = GenomeUtils.set_up_single_params( params, _WS, self._validate_genome_input_params, self.dfu.ws_name_to_id diff --git a/lib/GenomeFileUtil/core/GenomeUtils.py b/lib/GenomeFileUtil/core/GenomeUtils.py index d1b63935..491f6d24 100644 --- a/lib/GenomeFileUtil/core/GenomeUtils.py +++ b/lib/GenomeFileUtil/core/GenomeUtils.py @@ -495,7 +495,7 @@ def set_up_single_params( validate_params_func: Callable[[Dict[str, Any]], None], ws_name_to_id_func: Callable[[str], int] ) -> Dict[str, Any]: - """ + f""" Sets up parameters by validating them and ensuring that exactly one of workspace ID or name is provided. Args: @@ -509,12 +509,11 @@ def set_up_single_params( Returns: Dict[str, Any]: A dictionary containing the workspace ID and the processed parameters. The dictionary - has keys '_WSID' and '_INPUTS', where '_WSID' is the workspace ID and '_INPUTS' is a list containing + has keys {_WSID} and {_INPUTS}, where {_WSID} is the workspace ID and {_INPUTS} is a list containing the input parameters. Raises: ValueError: If neither or both the workspace ID and workspace name are provided in the parameters. - KeyError: If the workspace ID or name is missing or invalid. Notes: - If a workspace ID is not provided, the function will attempt to convert the workspace name to an ID @@ -540,24 +539,24 @@ def validate_mass_params( params: Dict[str, Any], validate_params_func: Callable[[Dict[str, Any]], None] ) -> None: - """ + f""" Validates the provided parameters according to specific rules. Args: params (Dict[str, Any]): A dictionary containing parameters to validate. Must include: - - _WSID: A workspace ID, which must be present and valid. - - _INPUTS: A list of parameter dictionaries, each of which must be validated by `validate_params_func`. + - {_WSID}: A workspace ID, which must be present and valid. + - {_INPUTS}: A list of parameter dictionaries, each of which must be validated by `validate_params_func`. validate_params_func (Callable[[Dict[str, Any]], None]): A function that takes a dictionary of parameters and validates it. The function should raise an exception if the parameters are invalid. Raises: - ValueError: If `_WSID` is missing or invalid, if `_INPUTS` is missing or not a non-empty list, or if any - entry in `_INPUTS` is not a dictionary or fails validation. + ValueError: If {_WSID} is missing or invalid, if {_INPUTS} is missing or not a non-empty list, or if any + entry in {_INPUTS} is not a dictionary or fails validation. Notes: - - The function checks that `_WSID` is present and converts it to an integer using `get_int`. - - The `_INPUTS` field must be a non-empty list of dictionaries. Each dictionary in the list is validated + - The function checks that {_WSID} is present and converts it to an integer using `get_int`. + - The {_INPUTS} field must be a non-empty list of dictionaries. Each dictionary in the list is validated using `validate_params_func`. - If any validation fails, a `ValueError` is raised with a message indicating the issue and entry index. """ From 01a1dc87a775123e18ed82d7dc2dfdea1fbba148 Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 1 Nov 2024 10:35:19 -0700 Subject: [PATCH 24/70] add workspace_id in GenomeFileUtil.spec --- GenomeFileUtil.spec | 1 + lib/GenomeFileUtil/GenomeFileUtilImpl.py | 44 ++++++++++++------------ 2 files changed, 23 insertions(+), 22 deletions(-) diff --git a/GenomeFileUtil.spec b/GenomeFileUtil.spec index 05cca1f9..5971b43d 100644 --- a/GenomeFileUtil.spec +++ b/GenomeFileUtil.spec @@ -318,6 +318,7 @@ module GenomeFileUtil { returns (MetagenomeSaveResult returnVal) authentication required; typedef structure { + int workspace_id; string workspace; string name; KBaseGenomes.Genome data; diff --git a/lib/GenomeFileUtil/GenomeFileUtilImpl.py b/lib/GenomeFileUtil/GenomeFileUtilImpl.py index 9ae1311d..b41f4d82 100644 --- a/lib/GenomeFileUtil/GenomeFileUtilImpl.py +++ b/lib/GenomeFileUtil/GenomeFileUtilImpl.py @@ -69,7 +69,7 @@ class GenomeFileUtil: ######################################### noqa VERSION = "0.11.7" GIT_URL = "git@github.com:kbaseapps/GenomeFileUtil.git" - GIT_COMMIT_HASH = "330d6c2da8a0dc2d57efffe690e8db2928455776" + GIT_COMMIT_HASH = "861a50b5ce2d0b8b481fe514b41a6d6b89ee0c96" #BEGIN_CLASS_HEADER #END_CLASS_HEADER @@ -831,27 +831,27 @@ def fasta_gff_to_metagenome(self, ctx, params): def save_one_genome(self, ctx, params): """ :param params: instance of type "SaveOneGenomeParams" -> structure: - parameter "workspace" of String, parameter "name" of String, - parameter "data" of type "Genome" (Genome type -- annotated and - assembled genome data. Field descriptions: id - string - KBase - legacy data ID scientific_name - string - human readable species - name domain - string - human readable phylogenetic domain name - (eg. "Bacteria") warnings - list of string - genome-level warnings - generated in the annotation process genome_tiers - list of string - - controlled vocabulary (based on app input and checked by - GenomeFileUtil) A list of labels describing the data source for - this genome. Allowed values - Representative, Reference, - ExternalDB, User Tier assignments based on genome source: * All - phytozome - Representative and ExternalDB * Phytozome flagship - genomes - Reference, Representative and ExternalDB * Ensembl - - Representative and ExternalDB * RefSeq Reference - Reference, - Representative and ExternalDB * RefSeq Representative - - Representative and ExternalDB * RefSeq Latest or All Assemblies - folder - ExternalDB * User Data - User tagged feature_counts - map - of string to integer - total counts of each type of feature keys - are a controlled vocabulary of - "CDS", "gene", "misc_feature", - "misc_recomb", "mobile_element", "ncRNA" - 72, - "non_coding_features", "non_coding_genes", + parameter "workspace_id" of Long, parameter "workspace" of String, + parameter "name" of String, parameter "data" of type "Genome" + (Genome type -- annotated and assembled genome data. Field + descriptions: id - string - KBase legacy data ID scientific_name - + string - human readable species name domain - string - human + readable phylogenetic domain name (eg. "Bacteria") warnings - list + of string - genome-level warnings generated in the annotation + process genome_tiers - list of string - controlled vocabulary + (based on app input and checked by GenomeFileUtil) A list of + labels describing the data source for this genome. Allowed values + - Representative, Reference, ExternalDB, User Tier assignments + based on genome source: * All phytozome - Representative and + ExternalDB * Phytozome flagship genomes - Reference, + Representative and ExternalDB * Ensembl - Representative and + ExternalDB * RefSeq Reference - Reference, Representative and + ExternalDB * RefSeq Representative - Representative and ExternalDB + * RefSeq Latest or All Assemblies folder - ExternalDB * User Data + - User tagged feature_counts - map of string to integer - total + counts of each type of feature keys are a controlled vocabulary of + - "CDS", "gene", "misc_feature", "misc_recomb", "mobile_element", + "ncRNA" - 72, "non_coding_features", "non_coding_genes", "protein_encoding_gene", "rRNA", "rep_origin", "repeat_region", "tRNA" genetic_code - int - An NCBI-assigned taxonomic category for the organism See here - From 654a5e94ec7a7103f3a0bb95e8002023683adcd6 Mon Sep 17 00:00:00 2001 From: Sijie Date: Mon, 19 May 2025 15:33:56 -0700 Subject: [PATCH 25/70] replace formatted string literals by docstring --- lib/GenomeFileUtil/core/GenomeUtils.py | 18 +++++++++--------- 1 file changed, 9 insertions(+), 9 deletions(-) diff --git a/lib/GenomeFileUtil/core/GenomeUtils.py b/lib/GenomeFileUtil/core/GenomeUtils.py index 491f6d24..d75e9967 100644 --- a/lib/GenomeFileUtil/core/GenomeUtils.py +++ b/lib/GenomeFileUtil/core/GenomeUtils.py @@ -495,7 +495,7 @@ def set_up_single_params( validate_params_func: Callable[[Dict[str, Any]], None], ws_name_to_id_func: Callable[[str], int] ) -> Dict[str, Any]: - f""" + """ Sets up parameters by validating them and ensuring that exactly one of workspace ID or name is provided. Args: @@ -509,7 +509,7 @@ def set_up_single_params( Returns: Dict[str, Any]: A dictionary containing the workspace ID and the processed parameters. The dictionary - has keys {_WSID} and {_INPUTS}, where {_WSID} is the workspace ID and {_INPUTS} is a list containing + has keys workspace_id and inputs, where workspace_id is the workspace ID and inputs is a list containing the input parameters. Raises: @@ -539,24 +539,24 @@ def validate_mass_params( params: Dict[str, Any], validate_params_func: Callable[[Dict[str, Any]], None] ) -> None: - f""" + """ Validates the provided parameters according to specific rules. Args: params (Dict[str, Any]): A dictionary containing parameters to validate. Must include: - - {_WSID}: A workspace ID, which must be present and valid. - - {_INPUTS}: A list of parameter dictionaries, each of which must be validated by `validate_params_func`. + - workspace_id: A workspace ID, which must be present and valid. + - inputs: A list of parameter dictionaries, each of which must be validated by `validate_params_func`. validate_params_func (Callable[[Dict[str, Any]], None]): A function that takes a dictionary of parameters and validates it. The function should raise an exception if the parameters are invalid. Raises: - ValueError: If {_WSID} is missing or invalid, if {_INPUTS} is missing or not a non-empty list, or if any - entry in {_INPUTS} is not a dictionary or fails validation. + ValueError: If workspace_id is missing or invalid, if inputs is missing or not a non-empty list, or if any + entry in inputs is not a dictionary or fails validation. Notes: - - The function checks that {_WSID} is present and converts it to an integer using `get_int`. - - The {_INPUTS} field must be a non-empty list of dictionaries. Each dictionary in the list is validated + - The function checks that workspace_id is present and converts it to an integer using `get_int`. + - The inputs field must be a non-empty list of dictionaries. Each dictionary in the list is validated using `validate_params_func`. - If any validation fails, a `ValueError` is raised with a message indicating the issue and entry index. """ From bda89a05105fd7943481c8d62de36eab2596c3dd Mon Sep 17 00:00:00 2001 From: Sijie Date: Tue, 20 May 2025 15:44:50 -0700 Subject: [PATCH 26/70] add check_hidden func and tests --- test/problematic_tests/save_genome_test.py | 16 +++++++++++++++- 1 file changed, 15 insertions(+), 1 deletion(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index c2e51b46..96938076 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -183,6 +183,17 @@ def check_save_one_genome_output( # Check warnings self.assertEqual(ret['warnings'], warnings) + def check_hidden(self, target_genome_name): + object_list = self.wsClient.list_objects({'workspaces': [self.wsName]}) + genome_names = [object_info[1] for object_info in object_list] + self.assertNotIn(target_genome_name, genome_names) + + object_list = self.wsClient.list_objects( + {'workspaces': [self.wsName], 'showHidden':1} + ) + genome_names = [object_info[1] for object_info in object_list] + self.assertIn(target_genome_name, genome_names) + def test_bad_one_genome_params(self): self.start_test() invalidate_params = {'missing_workspace': 'workspace', @@ -202,20 +213,23 @@ def test_one_genome(self): def test_one_genome_with_hidden(self): self.start_test() - genome_name = 'test_genome_hidden' + genome_name = 'test_genome_hidden_1' params = {'workspace': self.wsName, 'name': genome_name, 'data': self.test_genome_data, 'hidden': 1} ret = self.getImpl().save_one_genome(self.ctx, params)[0] self.check_save_one_genome_output(ret, genome_name) + self.check_hidden(genome_name) + genome_name = 'test_genome_hidden_2' params = {'workspace': self.wsName, 'name': genome_name, 'data': self.test_genome_data, 'hidden': True} ret = self.getImpl().save_one_genome(self.ctx, params)[0] self.check_save_one_genome_output(ret, genome_name) + self.check_hidden(genome_name) def test_genomes(self): self.start_test() From 6bb100942a695143ce5b5349a8dce1e229ce68e0 Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 23 May 2025 15:03:26 -0700 Subject: [PATCH 27/70] update check info, display prov and data --- test/problematic_tests/save_genome_test.py | 70 ++++++++++++++++------ 1 file changed, 53 insertions(+), 17 deletions(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 96938076..16215aa5 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -161,7 +161,32 @@ def fail_save_genome(self, params, error, exception=ValueError, contains=False, else: self.assertEqual(error, str(context.exception)) - def check_save_one_genome_output( + def _get_object(self, result): + ref = f'{result[6]}/{result[0]}/{result[4]}' + return self.wsClient.get_objects2({"objects": [{'ref': result[ref]}]})["data"][0] + + def check_genomes_info_prov_data(self, results, genome_names): + for idx, res in enumerate(results): + obj = self._get_object(res) + self.check_genome_info(res, genome_names[idx]) + self.check_genome_prov(obj) + self.check_genome_data(obj) + + def check_genome_data(self, obj): + data = obj["data"] + print("*" * 40) + print("data is: ") + print(data) + print("*" * 40) + + def check_genome_prov(self, obj): + prov = obj["provenance"] + print("*" * 40) + print("prov is: ") + print(prov) + print("*" * 40) + + def check_genome_info( self, ret, genome_name, @@ -176,6 +201,7 @@ def check_save_one_genome_output( self.assertEqual(genome_info[1], genome_name) self.assertEqual(genome_info[2].split('-')[0], data_type) self.assertTrue(datetime.strptime(genome_info[3], '%Y-%m-%dT%H:%M:%S+%f')) + self.assertEqual(genome_info[4], 1) self.assertEqual(genome_info[5], self.user_id) self.assertEqual(genome_info[6], self.wsID) self.assertEqual(genome_info[7], self.wsName) @@ -194,7 +220,7 @@ def check_hidden(self, target_genome_name): genome_names = [object_info[1] for object_info in object_list] self.assertIn(target_genome_name, genome_names) - def test_bad_one_genome_params(self): + def yest_bad_one_genome_params(self): self.start_test() invalidate_params = {'missing_workspace': 'workspace', 'name': 'name', @@ -202,16 +228,16 @@ def test_bad_one_genome_params(self): error_msg = "Exactly one of a 'workspace_id' or a 'workspace' parameter must be provided" self.fail_save_genome(invalidate_params, error_msg) - def test_one_genome(self): + def yest_one_genome(self): self.start_test() genome_name = 'test_genome' params = {'workspace': self.wsName, 'name': genome_name, 'data': self.test_genome_data} ret = self.getImpl().save_one_genome(self.ctx, params)[0] - self.check_save_one_genome_output(ret, genome_name) + self.check_genome_info(ret, genome_name) - def test_one_genome_with_hidden(self): + def yest_one_genome_with_hidden(self): self.start_test() genome_name = 'test_genome_hidden_1' params = {'workspace': self.wsName, @@ -219,7 +245,7 @@ def test_one_genome_with_hidden(self): 'data': self.test_genome_data, 'hidden': 1} ret = self.getImpl().save_one_genome(self.ctx, params)[0] - self.check_save_one_genome_output(ret, genome_name) + self.check_genome_info(ret, genome_name) self.check_hidden(genome_name) genome_name = 'test_genome_hidden_2' @@ -228,23 +254,33 @@ def test_one_genome_with_hidden(self): 'data': self.test_genome_data, 'hidden': True} ret = self.getImpl().save_one_genome(self.ctx, params)[0] - self.check_save_one_genome_output(ret, genome_name) + self.check_genome_info(ret, genome_name) self.check_hidden(genome_name) def test_genomes(self): self.start_test() - genome_name = 'test_genome' + genome_name1 = 'test_genome_1' + genome_name2 = 'test_genome_2' + + genome_names = [genome_name1, genome_name2] + inputs = [ { - 'name': genome_name, + 'name': genome_name1, + 'data': self.test_genome_data, + 'meta': {"foo": "zoo"} + }, + { + 'name': genome_name2, 'data': self.test_genome_data, + 'meta': {"zoo": "foo"} } ] params = {'workspace_id': self.wsID, 'inputs': inputs} - ret = self.genome_interface.save_genome_mass(params, validate_genome=True)[0] - self.check_save_one_genome_output(ret, genome_name) + results = self.genome_interface.save_genome_mass(params, validate_genome=True) + self.check_genomes_info_prov_data(results, genome_names) - def test_genomes_with_hidden(self): + def yest_genomes_with_hidden(self): self.start_test() genome_name = 'test_genome_hidden' inputs = [ @@ -256,7 +292,7 @@ def test_genomes_with_hidden(self): ] params = {'workspace_id': self.wsID, 'inputs': inputs} ret = self.genome_interface.save_genome_mass(params)[0] - self.check_save_one_genome_output(ret, genome_name, warnings=[]) + self.check_genome_info(ret, genome_name, warnings=[]) inputs = [ { @@ -267,9 +303,9 @@ def test_genomes_with_hidden(self): ] params = {'workspace_id': self.wsID, 'inputs': inputs} ret = self.genome_interface.save_genome_mass(params)[0] - self.check_save_one_genome_output(ret, genome_name, warnings=[]) + self.check_genome_info(ret, genome_name, warnings=[]) - def test_bad_genomes_params_missing_parameter(self): + def yest_bad_genomes_params_missing_parameter(self): self.start_test() invalidate_params = { 'workspace_id': self.wsID, @@ -278,7 +314,7 @@ def test_bad_genomes_params_missing_parameter(self): error_msg = "Entry #1 in inputs field has invalid params: name parameter is required, but missing" self.fail_save_genome(invalidate_params, error_msg, mass=True) - def test_GenomeInterface_check_dna_sequence_in_features(self): + def yest_GenomeInterface_check_dna_sequence_in_features(self): # no feature in genome genome = {'missing_features': 'features'} copied_genome = genome.copy() @@ -305,7 +341,7 @@ def test_GenomeInterface_check_dna_sequence_in_features(self): self.assertTrue(feature_dna_sum > 3000000) self.assertEqual(copied_genome, self.test_genome_data) - def test_GenomeInterface_own_handle(self): + def yest_GenomeInterface_own_handle(self): # no handle in genome genome = {'missing_genbank_handle_ref': 'hid'} origin_genome = genome.copy() From 2f546ac6298dfb4a0ab56bb8bce4fc18c5960f12 Mon Sep 17 00:00:00 2001 From: Sijie Date: Tue, 27 May 2025 16:38:19 -0700 Subject: [PATCH 28/70] move info, prov, and data checks to test_utils.py --- test/problematic_tests/save_genome_test.py | 9 +- .../genbank_upload_full_test.py | 369 +++++++++--------- test/test_utils.py | 199 ++++++++++ 3 files changed, 395 insertions(+), 182 deletions(-) create mode 100644 test/test_utils.py diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 16215aa5..ecd1771e 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -162,8 +162,9 @@ def fail_save_genome(self, params, error, exception=ValueError, contains=False, self.assertEqual(error, str(context.exception)) def _get_object(self, result): - ref = f'{result[6]}/{result[0]}/{result[4]}' - return self.wsClient.get_objects2({"objects": [{'ref': result[ref]}]})["data"][0] + info = result["info"] + ref = f'{info[6]}/{info[0]}/{info[4]}' + return self.wsClient.get_objects2({"objects": [{'ref': ref}]})["data"][0] def check_genomes_info_prov_data(self, results, genome_names): for idx, res in enumerate(results): @@ -201,7 +202,7 @@ def check_genome_info( self.assertEqual(genome_info[1], genome_name) self.assertEqual(genome_info[2].split('-')[0], data_type) self.assertTrue(datetime.strptime(genome_info[3], '%Y-%m-%dT%H:%M:%S+%f')) - self.assertEqual(genome_info[4], 1) + self.assertEqual(genome_info[5], self.user_id) self.assertEqual(genome_info[6], self.wsID) self.assertEqual(genome_info[7], self.wsName) @@ -277,7 +278,7 @@ def test_genomes(self): } ] params = {'workspace_id': self.wsID, 'inputs': inputs} - results = self.genome_interface.save_genome_mass(params, validate_genome=True) + results = self.genome_interface.save_genome_mass(params, validate_genome=True)[0] self.check_genomes_info_prov_data(results, genome_names) def yest_genomes_with_hidden(self): diff --git a/test/supplemental_genbank_tests/genbank_upload_full_test.py b/test/supplemental_genbank_tests/genbank_upload_full_test.py index 7a55066e..c4cb9944 100644 --- a/test/supplemental_genbank_tests/genbank_upload_full_test.py +++ b/test/supplemental_genbank_tests/genbank_upload_full_test.py @@ -17,10 +17,11 @@ from installed_clients.DataFileUtilClient import DataFileUtil from installed_clients.WorkspaceClient import Workspace as workspaceService from conftest import assert_exception_correct +from test_utils import check_result_object_info_provenance_data -_UPA_PATTERN = re.compile(r'^[0-9]+\/[0-9]+\/[0-9]$') -_OBJECT_VERSION_PATTERN = re.compile(r'^[0-9]+\/[0-9]+\/1$') -_PROV_SUBACTION_VERSION_PATTERN = re.compile(r'^\d+\.\d+\.\d+-(release|beta)$') +# _UPA_PATTERN = re.compile(r'^[0-9]+\/[0-9]+\/[0-9]$') +# _OBJECT_VERSION_PATTERN = re.compile(r'^[0-9]+\/[0-9]+\/1$') +# _PROV_SUBACTION_VERSION_PATTERN = re.compile(r'^\d+\.\d+\.\d+-(release|beta)$') class GenomeFileUtilTest(unittest.TestCase): @classmethod @@ -225,179 +226,179 @@ def _dump_retrieved_data(self, json_path, dictionary): with open(json_path, "w") as outfile: json.dump(dictionary, outfile) - def _get_blob_id(self, handle_id): - handles = self.hs.hids_to_handles([handle_id]) - blob_id = handles[0]['id'] - return blob_id - - def _download_file_from_blobstore(self, handle_id): - output_dir = self.cfg['scratch'] + "/" + str(uuid.uuid4()) - os.makedirs(output_dir) - file_ret = self.dfuClient.shock_to_file( - { - 'handle_id': handle_id, - 'file_path': output_dir, - 'unpack': 'unpack', - } - ) - return file_ret - - def _calculate_md5sum(self, file_path): - md5 = hashlib.md5() - with open(file_path, "rb") as f: - for chunk in iter(lambda: f.read(4096), b""): - md5.update(chunk) - return md5.hexdigest() - - def _retrieve_provenance(self, provenance): - # make a deep copy to avoid modifying the original provenance - provs = [prov.copy() for prov in provenance] - for prov in provs: - for key in ["time", "epoch"]: - prov.pop(key) - for subaction in prov['subactions']: - subaction.pop("commit") - if subaction["name"] != "GenomeFileUtil": - version = subaction.pop("ver") - assert _PROV_SUBACTION_VERSION_PATTERN.match(version) - return provs - - def _check_assembly_upa(self, retrieved_upa, expected_upa): - assert _UPA_PATTERN.match(retrieved_upa) - assert retrieved_upa == expected_upa - - def _retrieve_genome_metadata(self, metadata, expected_assembly_upa): - # make a deep copy to avoid modifying the original metadata - metadata = deepcopy(metadata) - retrieved_assembly_upa = metadata.pop("Assembly Object") - self._check_assembly_upa(retrieved_assembly_upa, expected_assembly_upa) - return metadata - - def _retrieve_genome_data(self, data, expected_assembly_ref): - # make a deep copy to avoid modifying the original genome data - data = deepcopy(data) - for key in ["cdss", "features", "mrnas", "non_coding_features"]: - for dist in data.get(key): - if dist.get("aliases"): - dist["aliases"] = sorted(dist["aliases"]) - - retrieved_assembly_ref = data.pop("assembly_ref") - assert _UPA_PATTERN.match(retrieved_assembly_ref) - assert retrieved_assembly_ref == expected_assembly_ref - - # check handle ref - handle_id = data.pop("genbank_handle_ref") - file_ret = self._download_file_from_blobstore(handle_id) - - file_path = file_ret['file_path'] - retrieved_node_filename = file_ret['node_file_name'] - retrieved_genome_md5sum = self._calculate_md5sum(file_path) - - for ontology_event in data.get("ontology_events", []): - ontology_event.pop("timestamp") - ontology_ref = ontology_event.pop("ontology_ref") - assert _UPA_PATTERN.match(ontology_ref) - - return data, retrieved_genome_md5sum, retrieved_node_filename - - def _retrieve_assembly_data(self, data): - # make a deep copy to avoid modifying the original assembly data - data = deepcopy(data) - - handle_id = data.pop("fasta_handle_ref") - assert handle_id.split("_")[0] == "KBH" - - handle_info = data["fasta_handle_info"] - blob_id = handle_info.pop("shock_id") - - handle = handle_info['handle'] - assert handle.pop('hid') == handle_id - assert handle.pop('id') == blob_id - - # check handle_id and blob_id are match - retrieved_blob_id = self._get_blob_id(handle_id) - assert retrieved_blob_id == blob_id - - # check handle ref - file_ret = self._download_file_from_blobstore(handle_id) - file_path = file_ret['file_path'] - retrieved_node_filename = file_ret['node_file_name'] - retrieved_assembly_md5sum = self._calculate_md5sum(file_path) - assert retrieved_assembly_md5sum == handle["remote_md5"] - - url = handle.get('url') - assert url.startswith('https://') - assert url.endswith('kbase.us/services/shock-api') - - return data, retrieved_assembly_md5sum, retrieved_node_filename - - def _get_object(self, result, is_genome): - ref = 'genome_ref' if is_genome else 'assembly_ref' - assert _OBJECT_VERSION_PATTERN.match(result[ref]) - return self.wsClient.get_objects2({"objects": [{'ref': result[ref]}]})["data"][0] - - def _check_info(self, obj, result, file_name, expected_metadata, is_genome): - info = obj["info"] - assembly_upa = result["assembly_ref"] - object_info = 'genome_info' if is_genome else 'assembly_info' - object_name = file_name if is_genome else file_name + "_assembly" - object_type = 'KBaseGenomes.Genome' if is_genome else 'KBaseGenomeAnnotations.Assembly' - retrieved_metadata = self._retrieve_genome_metadata(info[10], assembly_upa) if is_genome else info[10] - - assert info == result[object_info] - assert info[1] == object_name - assert info[2].split('-')[0] == object_type - - # check version - assert info[4] == 1 - # datetime.fromisoformat is not available in Python 3.6 or below - assert datetime.strptime(info[3], '%Y-%m-%dT%H:%M:%S+%f') - assert info[6] == self.wsID - assert info[7] == self.wsName - - # check metadata - assert retrieved_metadata == expected_metadata - - def _check_prov(self, obj, expected_provenance): - provenance = obj["provenance"] - retrieved_provenance = self._retrieve_provenance(provenance) - assert retrieved_provenance == expected_provenance - - def _check_data(self, obj, result, file_name, expected_data, expected_md5sum, is_genome): - data = obj["data"] - expected_assembly_ref = result["assembly_ref"] - - retrieved_data, retrieved_md5sum, retrieved_node_filename = ( - self._retrieve_genome_data(data, expected_assembly_ref) - if is_genome - else self._retrieve_assembly_data(data) - ) - - expected_node_filename = ( - file_name + ".gz" - if is_genome - else file_name + "_assembly.fasta" - ) - - assert retrieved_data == expected_data - assert retrieved_md5sum == expected_md5sum - assert retrieved_node_filename == expected_node_filename - - def _check_result_object_info_provenance_data( - self, - results, - file_names, - expected_metadata, - expected_provenance, - expected_data, - expected_md5sum, - is_genome=True, - ): - for idx, res in enumerate(results): - obj = self._get_object(res, is_genome) - self._check_info(obj, res, file_names[idx], expected_metadata[idx], is_genome) - self._check_prov(obj, expected_provenance) - self._check_data(obj, res, file_names[idx], expected_data[idx], expected_md5sum[idx], is_genome) + # def _get_blob_id(self, handle_id): + # handles = self.hs.hids_to_handles([handle_id]) + # blob_id = handles[0]['id'] + # return blob_id + + # def _download_file_from_blobstore(self, handle_id): + # output_dir = self.cfg['scratch'] + "/" + str(uuid.uuid4()) + # os.makedirs(output_dir) + # file_ret = self.dfuClient.shock_to_file( + # { + # 'handle_id': handle_id, + # 'file_path': output_dir, + # 'unpack': 'unpack', + # } + # ) + # return file_ret + + # def _calculate_md5sum(self, file_path): + # md5 = hashlib.md5() + # with open(file_path, "rb") as f: + # for chunk in iter(lambda: f.read(4096), b""): + # md5.update(chunk) + # return md5.hexdigest() + + # def _retrieve_provenance(self, provenance): + # # make a deep copy to avoid modifying the original provenance + # provs = [prov.copy() for prov in provenance] + # for prov in provs: + # for key in ["time", "epoch"]: + # prov.pop(key) + # for subaction in prov['subactions']: + # subaction.pop("commit") + # if subaction["name"] != "GenomeFileUtil": + # version = subaction.pop("ver") + # assert _PROV_SUBACTION_VERSION_PATTERN.match(version) + # return provs + + # def _check_assembly_upa(self, retrieved_upa, expected_upa): + # assert _UPA_PATTERN.match(retrieved_upa) + # assert retrieved_upa == expected_upa + + # def _retrieve_genome_metadata(self, metadata, expected_assembly_upa): + # # make a deep copy to avoid modifying the original metadata + # metadata = deepcopy(metadata) + # retrieved_assembly_upa = metadata.pop("Assembly Object") + # self._check_assembly_upa(retrieved_assembly_upa, expected_assembly_upa) + # return metadata + + # def _retrieve_genome_data(self, data, expected_assembly_ref): + # # make a deep copy to avoid modifying the original genome data + # data = deepcopy(data) + # for key in ["cdss", "features", "mrnas", "non_coding_features"]: + # for dist in data.get(key): + # if dist.get("aliases"): + # dist["aliases"] = sorted(dist["aliases"]) + + # retrieved_assembly_ref = data.pop("assembly_ref") + # assert _UPA_PATTERN.match(retrieved_assembly_ref) + # assert retrieved_assembly_ref == expected_assembly_ref + + # # check handle ref + # handle_id = data.pop("genbank_handle_ref") + # file_ret = self._download_file_from_blobstore(handle_id) + + # file_path = file_ret['file_path'] + # retrieved_node_filename = file_ret['node_file_name'] + # retrieved_genome_md5sum = self._calculate_md5sum(file_path) + + # for ontology_event in data.get("ontology_events", []): + # ontology_event.pop("timestamp") + # ontology_ref = ontology_event.pop("ontology_ref") + # assert _UPA_PATTERN.match(ontology_ref) + + # return data, retrieved_genome_md5sum, retrieved_node_filename + + # def _retrieve_assembly_data(self, data): + # # make a deep copy to avoid modifying the original assembly data + # data = deepcopy(data) + + # handle_id = data.pop("fasta_handle_ref") + # assert handle_id.split("_")[0] == "KBH" + + # handle_info = data["fasta_handle_info"] + # blob_id = handle_info.pop("shock_id") + + # handle = handle_info['handle'] + # assert handle.pop('hid') == handle_id + # assert handle.pop('id') == blob_id + + # # check handle_id and blob_id are match + # retrieved_blob_id = self._get_blob_id(handle_id) + # assert retrieved_blob_id == blob_id + + # # check handle ref + # file_ret = self._download_file_from_blobstore(handle_id) + # file_path = file_ret['file_path'] + # retrieved_node_filename = file_ret['node_file_name'] + # retrieved_assembly_md5sum = self._calculate_md5sum(file_path) + # assert retrieved_assembly_md5sum == handle["remote_md5"] + + # url = handle.get('url') + # assert url.startswith('https://') + # assert url.endswith('kbase.us/services/shock-api') + + # return data, retrieved_assembly_md5sum, retrieved_node_filename + + # def _get_object(self, result, is_genome): + # ref = 'genome_ref' if is_genome else 'assembly_ref' + # assert _OBJECT_VERSION_PATTERN.match(result[ref]) + # return self.wsClient.get_objects2({"objects": [{'ref': result[ref]}]})["data"][0] + + # def _check_info(self, obj, result, file_name, expected_metadata, is_genome): + # info = obj["info"] + # assembly_upa = result["assembly_ref"] + # object_info = 'genome_info' if is_genome else 'assembly_info' + # object_name = file_name if is_genome else file_name + "_assembly" + # object_type = 'KBaseGenomes.Genome' if is_genome else 'KBaseGenomeAnnotations.Assembly' + # retrieved_metadata = self._retrieve_genome_metadata(info[10], assembly_upa) if is_genome else info[10] + + # assert info == result[object_info] + # assert info[1] == object_name + # assert info[2].split('-')[0] == object_type + + # # check version + # assert info[4] == 1 + # # datetime.fromisoformat is not available in Python 3.6 or below + # assert datetime.strptime(info[3], '%Y-%m-%dT%H:%M:%S+%f') + # assert info[6] == self.wsID + # assert info[7] == self.wsName + + # # check metadata + # assert retrieved_metadata == expected_metadata + + # def _check_prov(self, obj, expected_provenance): + # provenance = obj["provenance"] + # retrieved_provenance = self._retrieve_provenance(provenance) + # assert retrieved_provenance == expected_provenance + + # def _check_data(self, obj, result, file_name, expected_data, expected_md5sum, is_genome): + # data = obj["data"] + # expected_assembly_ref = result["assembly_ref"] + + # retrieved_data, retrieved_md5sum, retrieved_node_filename = ( + # self._retrieve_genome_data(data, expected_assembly_ref) + # if is_genome + # else self._retrieve_assembly_data(data) + # ) + + # expected_node_filename = ( + # file_name + ".gz" + # if is_genome + # else file_name + "_assembly.fasta" + # ) + + # assert retrieved_data == expected_data + # assert retrieved_md5sum == expected_md5sum + # assert retrieved_node_filename == expected_node_filename + + # def _check_result_object_info_provenance_data( + # self, + # results, + # file_names, + # expected_metadata, + # expected_provenance, + # expected_data, + # expected_md5sum, + # is_genome=True, + # ): + # for idx, res in enumerate(results): + # obj = self._get_object(res, is_genome) + # self._check_info(obj, res, file_names[idx], expected_metadata[idx], is_genome) + # self._check_prov(obj, expected_provenance) + # self._check_data(obj, res, file_names[idx], expected_data[idx], expected_md5sum[idx], is_genome) def test_genbank_to_genome_invalid_workspace(self): genome_name = "GCF_000970165.1_ASM97016v1_genomic.gbff.gz" @@ -544,18 +545,30 @@ def test_genbanks_to_genomes(self): self.assertEqual(len(results), 3) # check genome result - self._check_result_object_info_provenance_data( + check_result_object_info_provenance_data( results, file_names, + self.cfg['scratch'], + self.wsClient, + self.hs, + self.dfuClient, + self.wsID, + self.wsName, genome_metas, self.provenance, expected_genome_data, expected_genome_md5sum ) # check assembly result - self._check_result_object_info_provenance_data( + check_result_object_info_provenance_data( results, file_names, + self.cfg['scratch'], + self.wsClient, + self.hs, + self.dfuClient, + self.wsID, + self.wsName, assembly_metas, self.provenance, expected_assembly_data, diff --git a/test/test_utils.py b/test/test_utils.py new file mode 100644 index 00000000..d27a2658 --- /dev/null +++ b/test/test_utils.py @@ -0,0 +1,199 @@ +from copy import deepcopy +import hashlib +import os +import re +from datetime import datetime +import uuid + +_UPA_PATTERN = re.compile(r'^[0-9]+\/[0-9]+\/[0-9]$') +_OBJECT_VERSION_PATTERN = re.compile(r'^[0-9]+\/[0-9]+\/1$') +_PROV_SUBACTION_VERSION_PATTERN = re.compile(r'^\d+\.\d+\.\d+-(release|beta)$') + +def check_result_object_info_provenance_data( + results, + file_names, + scratch_dir, + ws_client, + hs_client, + dfu_client, + expected_wsID, + expected_wsName, + expected_metadata, + expected_provenance, + expected_data, + expected_md5sum, + is_genome=True, +): + for idx, res in enumerate(results): + obj = _get_object(ws_client, res, is_genome) + _check_info(obj, res, file_names[idx], expected_metadata[idx], expected_wsID, expected_wsName, is_genome) + _check_prov(obj, expected_provenance) + _check_data(obj, res, file_names[idx], scratch_dir, hs_client, dfu_client, expected_data[idx], expected_md5sum[idx], is_genome) + +def _get_object(ws_client, result, is_genome): + ref = 'genome_ref' if is_genome else 'assembly_ref' + assert _OBJECT_VERSION_PATTERN.match(result[ref]) + return ws_client.get_objects2({"objects": [{'ref': result[ref]}]})["data"][0] + +def _check_info(obj, result, file_name, expected_metadata, expected_wsID, expected_wsName, is_genome): + info = obj["info"] + assembly_upa = result["assembly_ref"] + object_info = 'genome_info' if is_genome else 'assembly_info' + object_name = file_name if is_genome else file_name + "_assembly" + object_type = 'KBaseGenomes.Genome' if is_genome else 'KBaseGenomeAnnotations.Assembly' + retrieved_metadata = _retrieve_genome_metadata(info[10], assembly_upa) if is_genome else info[10] + + assert info == result[object_info] + assert info[1] == object_name + assert info[2].split('-')[0] == object_type + + # check version + assert info[4] == 1 + # datetime.fromisoformat is not available in Python 3.6 or below + assert datetime.strptime(info[3], '%Y-%m-%dT%H:%M:%S+%f') + assert info[6] == expected_wsID + assert info[7] == expected_wsName + + # check metadata + assert retrieved_metadata == expected_metadata + +def _retrieve_genome_metadata(metadata, expected_assembly_upa): + # make a deep copy to avoid modifying the original metadata + metadata = deepcopy(metadata) + retrieved_assembly_upa = metadata.pop("Assembly Object") + _check_assembly_upa(retrieved_assembly_upa, expected_assembly_upa) + return metadata + +def _check_assembly_upa(retrieved_upa, expected_upa): + assert _UPA_PATTERN.match(retrieved_upa) + assert retrieved_upa == expected_upa + +def _check_prov(obj, expected_provenance): + provenance = obj["provenance"] + retrieved_provenance = _retrieve_provenance(provenance) + assert retrieved_provenance == expected_provenance + +def _retrieve_provenance(provenance): + # make a deep copy to avoid modifying the original provenance + provs = [prov.copy() for prov in provenance] + for prov in provs: + for key in ["time", "epoch"]: + prov.pop(key) + for subaction in prov['subactions']: + subaction.pop("commit") + if subaction["name"] != "GenomeFileUtil": + version = subaction.pop("ver") + assert _PROV_SUBACTION_VERSION_PATTERN.match(version) + return provs + +def _check_data( + obj, + result, + file_name, + scratch_dir, + hs_client, + dfu_client, + expected_data, + expected_md5sum, + is_genome +): + data = obj["data"] + expected_assembly_ref = result["assembly_ref"] + + retrieved_data, retrieved_md5sum, retrieved_node_filename = ( + _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref) + if is_genome + else _retrieve_assembly_data(hs_client, dfu_client, scratch_dir, data) + ) + + expected_node_filename = ( + file_name + ".gz" + if is_genome + else file_name + "_assembly.fasta" + ) + + assert retrieved_data == expected_data + assert retrieved_md5sum == expected_md5sum + assert retrieved_node_filename == expected_node_filename + +def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref): + # make a deep copy to avoid modifying the original genome data + data = deepcopy(data) + for key in ["cdss", "features", "mrnas", "non_coding_features"]: + for dist in data.get(key): + if dist.get("aliases"): + dist["aliases"] = sorted(dist["aliases"]) + + retrieved_assembly_ref = data.pop("assembly_ref") + assert _UPA_PATTERN.match(retrieved_assembly_ref) + assert retrieved_assembly_ref == expected_assembly_ref + + # check handle ref + handle_id = data.pop("genbank_handle_ref") + file_ret = _download_file_from_blobstore(dfu_client, scratch_dir, handle_id) + + file_path = file_ret['file_path'] + retrieved_node_filename = file_ret['node_file_name'] + retrieved_genome_md5sum = _calculate_md5sum(file_path) + + for ontology_event in data.get("ontology_events", []): + ontology_event.pop("timestamp") + ontology_ref = ontology_event.pop("ontology_ref") + assert _UPA_PATTERN.match(ontology_ref) + + return data, retrieved_genome_md5sum, retrieved_node_filename + +def _retrieve_assembly_data(hs_client, dfu_client, scratch_dir, data): + # make a deep copy to avoid modifying the original assembly data + data = deepcopy(data) + + handle_id = data.pop("fasta_handle_ref") + assert handle_id.split("_")[0] == "KBH" + + handle_info = data["fasta_handle_info"] + blob_id = handle_info.pop("shock_id") + + handle = handle_info['handle'] + assert handle.pop('hid') == handle_id + assert handle.pop('id') == blob_id + + # check handle_id and blob_id are match + retrieved_blob_id = _get_blob_id(hs_client, handle_id) + assert retrieved_blob_id == blob_id + + # check handle ref + file_ret = _download_file_from_blobstore(dfu_client, scratch_dir, handle_id) + file_path = file_ret['file_path'] + retrieved_node_filename = file_ret['node_file_name'] + retrieved_assembly_md5sum = _calculate_md5sum(file_path) + assert retrieved_assembly_md5sum == handle["remote_md5"] + + url = handle.get('url') + assert url.startswith('https://') + assert url.endswith('kbase.us/services/shock-api') + + return data, retrieved_assembly_md5sum, retrieved_node_filename + +def _download_file_from_blobstore(dfu_client, scratch_dir, handle_id): + output_dir = scratch_dir + "/" + str(uuid.uuid4()) + os.makedirs(output_dir) + file_ret = dfu_client.shock_to_file( + { + 'handle_id': handle_id, + 'file_path': output_dir, + 'unpack': 'unpack', + } + ) + return file_ret + +def _calculate_md5sum(file_path): + md5 = hashlib.md5() + with open(file_path, "rb") as f: + for chunk in iter(lambda: f.read(4096), b""): + md5.update(chunk) + return md5.hexdigest() + +def _get_blob_id(hs_client, handle_id): + handles = hs_client.hids_to_handles([handle_id]) + blob_id = handles[0]['id'] + return blob_id From 0d192f7e9a0a5f436cbe460f1a807e307179fd6e Mon Sep 17 00:00:00 2001 From: Sijie Date: Tue, 27 May 2025 17:21:26 -0700 Subject: [PATCH 29/70] fix the failed test --- test/problematic_tests/save_genome_test.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index ecd1771e..aa2bb0c7 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -278,7 +278,7 @@ def test_genomes(self): } ] params = {'workspace_id': self.wsID, 'inputs': inputs} - results = self.genome_interface.save_genome_mass(params, validate_genome=True)[0] + results = self.genome_interface.save_genome_mass(params, validate_genome=True) self.check_genomes_info_prov_data(results, genome_names) def yest_genomes_with_hidden(self): From a8bced65d3aaacce98597fe56fbed29ea784352e Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 28 May 2025 16:47:28 -0700 Subject: [PATCH 30/70] clean up genbank_upload_full_test.py file --- .../genbank_upload_full_test.py | 182 ------------------ 1 file changed, 182 deletions(-) diff --git a/test/supplemental_genbank_tests/genbank_upload_full_test.py b/test/supplemental_genbank_tests/genbank_upload_full_test.py index c4cb9944..2de56dba 100644 --- a/test/supplemental_genbank_tests/genbank_upload_full_test.py +++ b/test/supplemental_genbank_tests/genbank_upload_full_test.py @@ -1,15 +1,10 @@ -import hashlib import json import os import pytest -import re import shutil import time import unittest -import uuid from configparser import ConfigParser -from copy import deepcopy -from datetime import datetime from GenomeFileUtil.GenomeFileUtilImpl import GenomeFileUtil from GenomeFileUtil.GenomeFileUtilServer import MethodContext @@ -19,9 +14,6 @@ from conftest import assert_exception_correct from test_utils import check_result_object_info_provenance_data -# _UPA_PATTERN = re.compile(r'^[0-9]+\/[0-9]+\/[0-9]$') -# _OBJECT_VERSION_PATTERN = re.compile(r'^[0-9]+\/[0-9]+\/1$') -# _PROV_SUBACTION_VERSION_PATTERN = re.compile(r'^\d+\.\d+\.\d+-(release|beta)$') class GenomeFileUtilTest(unittest.TestCase): @classmethod @@ -226,180 +218,6 @@ def _dump_retrieved_data(self, json_path, dictionary): with open(json_path, "w") as outfile: json.dump(dictionary, outfile) - # def _get_blob_id(self, handle_id): - # handles = self.hs.hids_to_handles([handle_id]) - # blob_id = handles[0]['id'] - # return blob_id - - # def _download_file_from_blobstore(self, handle_id): - # output_dir = self.cfg['scratch'] + "/" + str(uuid.uuid4()) - # os.makedirs(output_dir) - # file_ret = self.dfuClient.shock_to_file( - # { - # 'handle_id': handle_id, - # 'file_path': output_dir, - # 'unpack': 'unpack', - # } - # ) - # return file_ret - - # def _calculate_md5sum(self, file_path): - # md5 = hashlib.md5() - # with open(file_path, "rb") as f: - # for chunk in iter(lambda: f.read(4096), b""): - # md5.update(chunk) - # return md5.hexdigest() - - # def _retrieve_provenance(self, provenance): - # # make a deep copy to avoid modifying the original provenance - # provs = [prov.copy() for prov in provenance] - # for prov in provs: - # for key in ["time", "epoch"]: - # prov.pop(key) - # for subaction in prov['subactions']: - # subaction.pop("commit") - # if subaction["name"] != "GenomeFileUtil": - # version = subaction.pop("ver") - # assert _PROV_SUBACTION_VERSION_PATTERN.match(version) - # return provs - - # def _check_assembly_upa(self, retrieved_upa, expected_upa): - # assert _UPA_PATTERN.match(retrieved_upa) - # assert retrieved_upa == expected_upa - - # def _retrieve_genome_metadata(self, metadata, expected_assembly_upa): - # # make a deep copy to avoid modifying the original metadata - # metadata = deepcopy(metadata) - # retrieved_assembly_upa = metadata.pop("Assembly Object") - # self._check_assembly_upa(retrieved_assembly_upa, expected_assembly_upa) - # return metadata - - # def _retrieve_genome_data(self, data, expected_assembly_ref): - # # make a deep copy to avoid modifying the original genome data - # data = deepcopy(data) - # for key in ["cdss", "features", "mrnas", "non_coding_features"]: - # for dist in data.get(key): - # if dist.get("aliases"): - # dist["aliases"] = sorted(dist["aliases"]) - - # retrieved_assembly_ref = data.pop("assembly_ref") - # assert _UPA_PATTERN.match(retrieved_assembly_ref) - # assert retrieved_assembly_ref == expected_assembly_ref - - # # check handle ref - # handle_id = data.pop("genbank_handle_ref") - # file_ret = self._download_file_from_blobstore(handle_id) - - # file_path = file_ret['file_path'] - # retrieved_node_filename = file_ret['node_file_name'] - # retrieved_genome_md5sum = self._calculate_md5sum(file_path) - - # for ontology_event in data.get("ontology_events", []): - # ontology_event.pop("timestamp") - # ontology_ref = ontology_event.pop("ontology_ref") - # assert _UPA_PATTERN.match(ontology_ref) - - # return data, retrieved_genome_md5sum, retrieved_node_filename - - # def _retrieve_assembly_data(self, data): - # # make a deep copy to avoid modifying the original assembly data - # data = deepcopy(data) - - # handle_id = data.pop("fasta_handle_ref") - # assert handle_id.split("_")[0] == "KBH" - - # handle_info = data["fasta_handle_info"] - # blob_id = handle_info.pop("shock_id") - - # handle = handle_info['handle'] - # assert handle.pop('hid') == handle_id - # assert handle.pop('id') == blob_id - - # # check handle_id and blob_id are match - # retrieved_blob_id = self._get_blob_id(handle_id) - # assert retrieved_blob_id == blob_id - - # # check handle ref - # file_ret = self._download_file_from_blobstore(handle_id) - # file_path = file_ret['file_path'] - # retrieved_node_filename = file_ret['node_file_name'] - # retrieved_assembly_md5sum = self._calculate_md5sum(file_path) - # assert retrieved_assembly_md5sum == handle["remote_md5"] - - # url = handle.get('url') - # assert url.startswith('https://') - # assert url.endswith('kbase.us/services/shock-api') - - # return data, retrieved_assembly_md5sum, retrieved_node_filename - - # def _get_object(self, result, is_genome): - # ref = 'genome_ref' if is_genome else 'assembly_ref' - # assert _OBJECT_VERSION_PATTERN.match(result[ref]) - # return self.wsClient.get_objects2({"objects": [{'ref': result[ref]}]})["data"][0] - - # def _check_info(self, obj, result, file_name, expected_metadata, is_genome): - # info = obj["info"] - # assembly_upa = result["assembly_ref"] - # object_info = 'genome_info' if is_genome else 'assembly_info' - # object_name = file_name if is_genome else file_name + "_assembly" - # object_type = 'KBaseGenomes.Genome' if is_genome else 'KBaseGenomeAnnotations.Assembly' - # retrieved_metadata = self._retrieve_genome_metadata(info[10], assembly_upa) if is_genome else info[10] - - # assert info == result[object_info] - # assert info[1] == object_name - # assert info[2].split('-')[0] == object_type - - # # check version - # assert info[4] == 1 - # # datetime.fromisoformat is not available in Python 3.6 or below - # assert datetime.strptime(info[3], '%Y-%m-%dT%H:%M:%S+%f') - # assert info[6] == self.wsID - # assert info[7] == self.wsName - - # # check metadata - # assert retrieved_metadata == expected_metadata - - # def _check_prov(self, obj, expected_provenance): - # provenance = obj["provenance"] - # retrieved_provenance = self._retrieve_provenance(provenance) - # assert retrieved_provenance == expected_provenance - - # def _check_data(self, obj, result, file_name, expected_data, expected_md5sum, is_genome): - # data = obj["data"] - # expected_assembly_ref = result["assembly_ref"] - - # retrieved_data, retrieved_md5sum, retrieved_node_filename = ( - # self._retrieve_genome_data(data, expected_assembly_ref) - # if is_genome - # else self._retrieve_assembly_data(data) - # ) - - # expected_node_filename = ( - # file_name + ".gz" - # if is_genome - # else file_name + "_assembly.fasta" - # ) - - # assert retrieved_data == expected_data - # assert retrieved_md5sum == expected_md5sum - # assert retrieved_node_filename == expected_node_filename - - # def _check_result_object_info_provenance_data( - # self, - # results, - # file_names, - # expected_metadata, - # expected_provenance, - # expected_data, - # expected_md5sum, - # is_genome=True, - # ): - # for idx, res in enumerate(results): - # obj = self._get_object(res, is_genome) - # self._check_info(obj, res, file_names[idx], expected_metadata[idx], is_genome) - # self._check_prov(obj, expected_provenance) - # self._check_data(obj, res, file_names[idx], expected_data[idx], expected_md5sum[idx], is_genome) - def test_genbank_to_genome_invalid_workspace(self): genome_name = "GCF_000970165.1_ASM97016v1_genomic.gbff.gz" params = { From b690b094eb861d0b311495b0477acbd1b9ff388b Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 30 May 2025 16:12:36 -0700 Subject: [PATCH 31/70] add _get_info_and_ref helper function and refactor _check_info and _check_data --- .../genbank_upload_full_test.py | 5 +- test/test_utils.py | 46 +++++++++++++------ 2 files changed, 35 insertions(+), 16 deletions(-) diff --git a/test/supplemental_genbank_tests/genbank_upload_full_test.py b/test/supplemental_genbank_tests/genbank_upload_full_test.py index 2de56dba..9ecbde34 100644 --- a/test/supplemental_genbank_tests/genbank_upload_full_test.py +++ b/test/supplemental_genbank_tests/genbank_upload_full_test.py @@ -79,6 +79,7 @@ def setUpClass(cls): cls.wsName = "test_GenomeFileUtil_" + str(suffix) cls.wsID = cls.wsClient.create_workspace({'workspace': cls.wsName})[0] cls.serviceImpl = GenomeFileUtil(cls.cfg) + cls.scratch = cls.cfg['scratch'] cls.dfuClient = DataFileUtil(os.environ['SDK_CALLBACK_URL']) cls.hs = HandleService(cls.cfg['handle-service-url'], token=token) cls.kbase_endpoint = cls.cfg['kbase-endpoint'] @@ -366,7 +367,7 @@ def test_genbanks_to_genomes(self): check_result_object_info_provenance_data( results, file_names, - self.cfg['scratch'], + self.scratch, self.wsClient, self.hs, self.dfuClient, @@ -381,7 +382,7 @@ def test_genbanks_to_genomes(self): check_result_object_info_provenance_data( results, file_names, - self.cfg['scratch'], + self.scratch, self.wsClient, self.hs, self.dfuClient, diff --git a/test/test_utils.py b/test/test_utils.py index d27a2658..89ed6ff6 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -25,25 +25,44 @@ def check_result_object_info_provenance_data( is_genome=True, ): for idx, res in enumerate(results): - obj = _get_object(ws_client, res, is_genome) - _check_info(obj, res, file_names[idx], expected_metadata[idx], expected_wsID, expected_wsName, is_genome) + expected_info, ref, expected_assembly_upa = _get_info_and_ref(res, is_genome) + obj = _get_object(ws_client, ref) + _check_info(obj, file_names[idx], expected_metadata[idx], expected_wsID, expected_wsName, expected_info, expected_assembly_upa, is_genome) _check_prov(obj, expected_provenance) - _check_data(obj, res, file_names[idx], scratch_dir, hs_client, dfu_client, expected_data[idx], expected_md5sum[idx], is_genome) + _check_data(obj, file_names[idx], scratch_dir, hs_client, dfu_client, expected_data[idx], expected_md5sum[idx], expected_assembly_upa, is_genome) -def _get_object(ws_client, result, is_genome): - ref = 'genome_ref' if is_genome else 'assembly_ref' - assert _OBJECT_VERSION_PATTERN.match(result[ref]) - return ws_client.get_objects2({"objects": [{'ref': result[ref]}]})["data"][0] +def _get_info_and_ref(result, is_genome): + # Process the result returned by import_genbank_mass + if "genome_ref" in result and "assembly_ref" in result: + ref_type = "genome_ref" if is_genome else "assembly_ref" + object_info = "genome_info" if is_genome else "assembly_info" -def _check_info(obj, result, file_name, expected_metadata, expected_wsID, expected_wsName, is_genome): + info == result[object_info] + ref = result[ref_type] + assembly_upa = result["assembly_ref"] + + # Process the result returned by save_genome_mass + elif "info" in result: + info = result["info"] + ref = f'{info[6]}/{info[0]}/{info[4]}' + assembly_upa = info[10]["Assembly Object"] + + else: + raise ValueError("Result must originate from either import_genbank_mass or save_genome_mass.") + + return info, ref, assembly_upa + +def _get_object(ws_client, ref): + assert _OBJECT_VERSION_PATTERN.match(ref) + return ws_client.get_objects2({"objects": [{'ref': ref}]})["data"][0] + +def _check_info(obj, file_name, expected_metadata, expected_wsID, expected_wsName, expected_info, expected_assembly_upa, is_genome): info = obj["info"] - assembly_upa = result["assembly_ref"] - object_info = 'genome_info' if is_genome else 'assembly_info' object_name = file_name if is_genome else file_name + "_assembly" object_type = 'KBaseGenomes.Genome' if is_genome else 'KBaseGenomeAnnotations.Assembly' - retrieved_metadata = _retrieve_genome_metadata(info[10], assembly_upa) if is_genome else info[10] + retrieved_metadata = _retrieve_genome_metadata(info[10], expected_assembly_upa) if is_genome else info[10] - assert info == result[object_info] + assert info == expected_info assert info[1] == object_name assert info[2].split('-')[0] == object_type @@ -88,17 +107,16 @@ def _retrieve_provenance(provenance): def _check_data( obj, - result, file_name, scratch_dir, hs_client, dfu_client, expected_data, expected_md5sum, + expected_assembly_ref, is_genome ): data = obj["data"] - expected_assembly_ref = result["assembly_ref"] retrieved_data, retrieved_md5sum, retrieved_node_filename = ( _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref) From c1018dffa5987aa93f97d6942f3878c66e698177 Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 30 May 2025 16:50:07 -0700 Subject: [PATCH 32/70] fix UnboundLocalError --- test/test_utils.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/test/test_utils.py b/test/test_utils.py index 89ed6ff6..7e788c92 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -37,7 +37,7 @@ def _get_info_and_ref(result, is_genome): ref_type = "genome_ref" if is_genome else "assembly_ref" object_info = "genome_info" if is_genome else "assembly_info" - info == result[object_info] + info = result[object_info] ref = result[ref_type] assembly_upa = result["assembly_ref"] From 6f5de921770eb9a5b4eed9ae31426b812e7b074f Mon Sep 17 00:00:00 2001 From: Sijie Date: Mon, 2 Jun 2025 21:27:56 -0700 Subject: [PATCH 33/70] move provenance to test_utils for reuse --- test/problematic_tests/save_genome_test.py | 70 ++++++++++++++++++- .../genbank_upload_full_test.py | 41 +---------- test/test_utils.py | 54 ++++++++++++++ 3 files changed, 125 insertions(+), 40 deletions(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index aa2bb0c7..66f18b2e 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -16,6 +16,7 @@ import requests # noqa: F401 from installed_clients.AssemblyUtilClient import AssemblyUtil +from installed_clients.AbstractHandleClient import AbstractHandle as HandleService from installed_clients.DataFileUtilClient import DataFileUtil from GenomeFileUtil.GenomeFileUtilImpl import GenomeFileUtil from GenomeFileUtil.GenomeFileUtilImpl import SDKConfig @@ -23,6 +24,7 @@ from GenomeFileUtil.authclient import KBaseAuth as _KBaseAuth from GenomeFileUtil.core.GenomeInterface import GenomeInterface from installed_clients.WorkspaceClient import Workspace as workspaceService +from test_utils import check_result_object_info_provenance_data, PROVENANCE _KBASE_GENOME = "KBaseGenomes.Genome" _GENOME_FILE_WARNINGS = [ @@ -66,6 +68,8 @@ def setUpClass(cls): cls.callback_url = os.environ['SDK_CALLBACK_URL'] cls.dfu = DataFileUtil(cls.callback_url) + cls.hs = HandleService(cls.cfg['handle-service-url'], token=cls.token) + cls.provenance = PROVENANCE cls.cfg['KB_AUTH_TOKEN'] = cls.token # build genome interface instance @@ -265,6 +269,55 @@ def test_genomes(self): genome_names = [genome_name1, genome_name2] + genome_metas = [ + { + "Taxonomy": "cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli K-12", + "Size": "4641652", + "foo": "zoo", + "Source": "RefSeq", + "Name": "Escherichia coli str. K-12 substr. MG1655", + "GC content": "0.50791", + "Genetic code": "11", + "Number of Genome Level Warnings": "3", + "Source ID": "NC_000913", + "Number of Protein Encoding Genes": "0", + "Number contigs": "1", + "Domain": "Bacteria", + "Number of CDS": "4319", + "Genome Type": "Unknown", + "MD5": "afd67f98d72869f1e5b943aa9efd72af", + }, + { + "Taxonomy": "cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli K-12", + "Size": "4641652", + "Source": "RefSeq", + "Name": "Escherichia coli str. K-12 substr. MG1655", + "GC content": "0.50791", + "Genetic code": "11", + "Number of Genome Level Warnings": "3", + "Source ID": "NC_000913", + "Number of Protein Encoding Genes": "0", + "Number contigs": "1", + "zoo": "foo", + "Domain": "Bacteria", + "Number of CDS": "4319", + "Genome Type": "Unknown", + "MD5": "afd67f98d72869f1e5b943aa9efd72af", + } + ] + + expected_genome_data = [ + {}, + {}, + {}, + ] + + expected_genome_md5sum = [ + "", + "", + "", + ] + inputs = [ { 'name': genome_name1, @@ -279,7 +332,22 @@ def test_genomes(self): ] params = {'workspace_id': self.wsID, 'inputs': inputs} results = self.genome_interface.save_genome_mass(params, validate_genome=True) - self.check_genomes_info_prov_data(results, genome_names) + + # check genome result + check_result_object_info_provenance_data( + results, + genome_names, + self.scratch, + self.wsClient, + self.hs, + self.dfu, + self.wsID, + self.wsName, + genome_metas, + self.provenance, + expected_genome_data, + expected_genome_md5sum + ) def yest_genomes_with_hidden(self): self.start_test() diff --git a/test/supplemental_genbank_tests/genbank_upload_full_test.py b/test/supplemental_genbank_tests/genbank_upload_full_test.py index 9ecbde34..220754a9 100644 --- a/test/supplemental_genbank_tests/genbank_upload_full_test.py +++ b/test/supplemental_genbank_tests/genbank_upload_full_test.py @@ -12,7 +12,7 @@ from installed_clients.DataFileUtilClient import DataFileUtil from installed_clients.WorkspaceClient import Workspace as workspaceService from conftest import assert_exception_correct -from test_utils import check_result_object_info_provenance_data +from test_utils import check_result_object_info_provenance_data, PROVENANCE class GenomeFileUtilTest(unittest.TestCase): @@ -22,44 +22,7 @@ def setUpClass(cls): # WARNING: don't call any logging methods on the context object, # it'll result in a NoneType error cls.ctx = MethodContext(None) - cls.provenance = [ - { - "service": "GenomeFileUtil", - "service_ver": "local-dev", - "method": "run_local_tests", - "method_params": [], - "input_ws_objects": [], - "resolved_ws_objects": [], - "intermediate_incoming": [], - "intermediate_outgoing": [], - "external_data": [], - "subactions": [ - { - "name": "GenomeFileUtil", - "ver": "local-dev", - "code_url": "https://localhost", - }, - { - "name": "AssemblyUtil", - "code_url": "https://github.com/kbaseapps/AssemblyUtil", - }, - { - "name": "DataFileUtil", - "code_url": "https://github.com/kbaseapps/DataFileUtil", - }, - { - 'name': 'GenomeAnnotationAPI', - 'code_url': 'https://github.com/kbase/genome_annotation_api', - }, - { - "name": "WsLargeDataIO", - "code_url": "https://github.com/kbaseapps/WsLargeDataIO", - }, - ], - "custom": {}, - "description": "KBase SDK method run via the KBase Execution Engine", - } - ] + cls.provenance = PROVENANCE cls.ctx.update( { 'token': token, diff --git a/test/test_utils.py b/test/test_utils.py index 7e788c92..d9d08c7f 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -9,6 +9,45 @@ _OBJECT_VERSION_PATTERN = re.compile(r'^[0-9]+\/[0-9]+\/1$') _PROV_SUBACTION_VERSION_PATTERN = re.compile(r'^\d+\.\d+\.\d+-(release|beta)$') +PROVENANCE = [ + { + "service": "GenomeFileUtil", + "service_ver": "local-dev", + "method": "run_local_tests", + "method_params": [], + "input_ws_objects": [], + "resolved_ws_objects": [], + "intermediate_incoming": [], + "intermediate_outgoing": [], + "external_data": [], + "subactions": [ + { + "name": "GenomeFileUtil", + "ver": "local-dev", + "code_url": "https://localhost", + }, + { + "name": "AssemblyUtil", + "code_url": "https://github.com/kbaseapps/AssemblyUtil", + }, + { + "name": "DataFileUtil", + "code_url": "https://github.com/kbaseapps/DataFileUtil", + }, + { + "name": "GenomeAnnotationAPI", + "code_url": "https://github.com/kbase/genome_annotation_api", + }, + { + "name": "WsLargeDataIO", + "code_url": "https://github.com/kbaseapps/WsLargeDataIO", + }, + ], + "custom": {}, + "description": "KBase SDK method run via the KBase Execution Engine", + } +] + def check_result_object_info_provenance_data( results, file_names, @@ -129,6 +168,21 @@ def _check_data( if is_genome else file_name + "_assembly.fasta" ) + print("*" * 40) + print(f"file_name is {file_name}") + print("*" * 40) + + print("*" * 40) + print(f"retrieved_data is {retrieved_data}") + print("*" * 40) + + print("*" * 40) + print(f"retrieved_md5sum is {retrieved_md5sum}") + print("*" * 40) + + print("*" * 40) + print(f"retrieved_node_filename is {retrieved_node_filename}") + print("*" * 40) assert retrieved_data == expected_data assert retrieved_md5sum == expected_md5sum From bd8ea82c843634358c028b14d606c750a88f0e36 Mon Sep 17 00:00:00 2001 From: Sijie Date: Mon, 2 Jun 2025 22:42:52 -0700 Subject: [PATCH 34/70] display data before pop genbank_handle_ref --- test/test_utils.py | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/test/test_utils.py b/test/test_utils.py index d9d08c7f..7eceec4a 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -200,6 +200,10 @@ def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref): assert _UPA_PATTERN.match(retrieved_assembly_ref) assert retrieved_assembly_ref == expected_assembly_ref + print("*" * 40) + print(f"data before pop is: {data}") + print("*" * 40) + # check handle ref handle_id = data.pop("genbank_handle_ref") file_ret = _download_file_from_blobstore(dfu_client, scratch_dir, handle_id) From 787c7b97ca9fc83e06c20951dbcbd996b0360d56 Mon Sep 17 00:00:00 2001 From: Sijie Date: Tue, 3 Jun 2025 13:27:57 -0700 Subject: [PATCH 35/70] display data before any processing --- test/test_utils.py | 11 ++++++++--- 1 file changed, 8 insertions(+), 3 deletions(-) diff --git a/test/test_utils.py b/test/test_utils.py index 7eceec4a..29d92de1 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -191,6 +191,11 @@ def _check_data( def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref): # make a deep copy to avoid modifying the original genome data data = deepcopy(data) + + print("*" * 40) + print(f"data before processing is: {data}") + print("*" * 40) + for key in ["cdss", "features", "mrnas", "non_coding_features"]: for dist in data.get(key): if dist.get("aliases"): @@ -200,9 +205,9 @@ def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref): assert _UPA_PATTERN.match(retrieved_assembly_ref) assert retrieved_assembly_ref == expected_assembly_ref - print("*" * 40) - print(f"data before pop is: {data}") - print("*" * 40) + # print("*" * 40) + # print(f"data before pop is: {data}") + # print("*" * 40) # check handle ref handle_id = data.pop("genbank_handle_ref") From 828edb6cbfca0034eee471e08641c4df00547dd1 Mon Sep 17 00:00:00 2001 From: Sijie Xiang Date: Tue, 3 Jun 2025 22:31:56 +0000 Subject: [PATCH 36/70] add target genome data to pass in --- data.json | 288029 +++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 288029 insertions(+) create mode 100644 data.json diff --git a/data.json b/data.json new file mode 100644 index 00000000..e2b6067b --- /dev/null +++ b/data.json @@ -0,0 +1,288029 @@ +{ + "assembly_ref": "79321/1/1", + "cdss": [ + { + "aliases": [ + [ + "gene_synonym", + "GeneID:944742" + ], + [ + "gene_synonym", + "thrL" + ], + [ + "gene_synonym", + "b0001" + ], + [ + "gene_synonym", + "NP_414542.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD86" + ], + [ + "gene_synonym", + "ASAP:ABE-0000006" + ], + [ + "gene_synonym", + "JW4367" + ], + [ + "gene_synonym", + "GI:16127995" + ], + [ + "gene_synonym", + "ECK0001" + ], + [ + "gene_synonym", + "EcoGene:EG11277" + ] + ], + "dna_sequence": "ATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGA", + "dna_sequence_length": 66, + "functions": [ + "thr operon leader peptide" + ], + "id": "CDS_1", + "location": [ + [ + "NC_000913", + 190, + "+", + 66 + ] + ], + "md5": "cd572f0df722f00fc2123c68f381b98b", + "parent_gene": "", + "protein_md5": "13fe4258b37e32edda386faa50ec5fdf", + "protein_translation": "MKRISTTITTTITITTGNGAG", + "protein_translation_length": 21, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b0002" + ], + [ + "gene_synonym", + "EcoGene:EG10998" + ], + [ + "gene_synonym", + "Hs" + ], + [ + "gene_synonym", + "thrD" + ], + [ + "gene_synonym", + "GeneID:945803" + ], + [ + "gene_synonym", + "thrA" + ], + [ + "gene_synonym", + "GI:16127996" + ], + [ + "gene_synonym", + "thrA1" + ], + [ + "gene_synonym", + "thrA2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00561" + ], + [ + "gene_synonym", + "ECK0002" + ], + [ + "gene_synonym", + "ASAP:ABE-0000008" + ], + [ + "gene_synonym", + "NP_414543.1" + ], + [ + "gene_synonym", + "JW0001" + ] + ], + "dna_sequence": "ATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGAACGTTTTCTGCGTGTTGCCGATATTCTGGAAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTCTCTGCCCCCGCCAAAATCACCAACCACCTGGTGGCGATGATTGAAAAAACCATTAGCGGCCAGGATGCTTTACCCAATATCAGCGATGCCGAACGTATTTTTGCCGAACTTTTGACGGGACTCGCCGCCGCCCAGCCGGGGTTCCCGCTGGCGCAATTGAAAACTTTCGTCGATCAGGAATTTGCCCAAATAAAACATGTCCTGCATGGCATTAGTTTGTTGGGGCAGTGCCCGGATAGCATCAACGCTGCGCTGATTTGCCGTGGCGAGAAAATGTCGATCGCCATTATGGCCGGCGTATTAGAAGCGCGCGGTCACAACGTTACTGTTATCGATCCGGTCGAAAAACTGCTGGCAGTGGGGCATTACCTCGAATCTACCGTCGATATTGCTGAGTCCACCCGCCGTATTGCGGCAAGCCGCATTCCGGCTGATCACATGGTGCTGATGGCAGGTTTCACCGCCGGTAATGAAAAAGGCGAACTGGTGGTGCTTGGACGCAACGGTTCCGACTACTCTGCTGCGGTGCTGGCTGCCTGTTTACGCGCCGATTGTTGCGAGATTTGGACGGACGTTGACGGGGTCTATACCTGCGACCCGCGTCAGGTGCCCGATGCGAGGTTGTTGAAGTCGATGTCCTACCAGGAAGCGATGGAGCTTTCCTACTTCGGCGCTAAAGTTCTTCACCCCCGCACCATTACCCCCATCGCCCAGTTCCAGATCCCTTGCCTGATTAAAAATACCGGAAATCCTCAAGCACCAGGTACGCTCATTGGTGCCAGCCGTGATGAAGACGAATTACCGGTCAAGGGCATTTCCAATCTGAATAACATGGCAATGTTCAGCGTTTCTGGTCCGGGGATGAAAGGGATGGTCGGCATGGCGGCGCGCGTCTTTGCAGCGATGTCACGCGCCCGTATTTCCGTGGTGCTGATTACGCAATCATCTTCCGAATACAGCATCAGTTTCTGCGTTCCACAAAGCGACTGTGTGCGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGGCGTCGGTGGCGTTGGCGGTGCGCTGCTGGAGCAACTGAAGCGTCAGCAAAGCTGGCTGAAGAATAAACATATCGACTTACGTGTCTGCGGTGTTGCCAACTCGAAGGCTCTGCTCACCAATGTACATGGCCTTAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGTTATTGAGAACCTGCAAAATCTGCTCAATGCAGGTGATGAATTGATGAAGTTCTCCGGCATTCTTTCTGGTTCGCTTTCTTATATCTTCGGCAAGTTAGACGAAGGCATGAGTTTCTCCGAGGCGACCACGCTGGCGCGGGAAATGGGTTATACCGAACCGGACCCGCGAGATGATCTTTCTGGTATGGATGTGGCGCGTAAACTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTGCCCGCAGAGTTTAACGCCGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAACTCGACGATCTCTTTGCCGCGCGCGTGGCGAAGGCCCGTGATGAAGGAAAAGTTTTGCGCTATGTTGGCAATATTGATGAAGATGGCGTCTGCCGCGTGAAGATTGCCGAAGTGGATGGTAATGATCCGCTGTTCAAAGTGAAAAATGGCGAAAACGCCCTGGCCTTCTATAGCCACTATTATCAGCCGCTGCCGTTGGTACTGCGCGGATATGGTGCGGGCAATGACGTTACAGCTGCCGGTGTCTTTGCTGATCTGCTACGTACCCTCTCATGGAAGTTAGGAGTCTGA", + "dna_sequence_length": 2463, + "functions": [ + "Bifunctional aspartokinase/homoserine dehydrogenase 1" + ], + "id": "CDS_2", + "location": [ + [ + "NC_000913", + 337, + "+", + 2463 + ] + ], + "md5": "20d5afda58d5cfdaa163c62921443e25", + "parent_gene": "", + "protein_md5": "0f66dc2b3024a9739d0e912fde12b8ba", + "protein_translation": "MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIKHVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHYLESTVDIAESTRRIAASRIPADHMVLMAGFTAGNEKGELVVLGRNGSDYSAAVLAACLRADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQFQIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAARVFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAVTERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATTGVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKALLTNVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYADFLREGFHVVTPNKKANTSSMDYYHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQNLLNAGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARKLLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEGKVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSWKLGV", + "protein_translation_length": 820, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00547" + ], + [ + "gene_synonym", + "b0003" + ], + [ + "gene_synonym", + "EcoGene:EG10999" + ], + [ + "gene_synonym", + "thrB" + ], + [ + "gene_synonym", + "NP_414544.1" + ], + [ + "gene_synonym", + "GI:16127997" + ], + [ + "gene_synonym", + "ASAP:ABE-0000010" + ], + [ + "gene_synonym", + "ECK0003" + ], + [ + "gene_synonym", + "JW0002" + ], + [ + "gene_synonym", + "GeneID:947498" + ] + ], + "dna_sequence": "ATGGTTAAAGTTTATGCCCCGGCTTCCAGTGCCAATATGAGCGTCGGGTTTGATGTGCTCGGGGCGGCGGTGACACCTGTTGATGGTGCATTGCTCGGAGATGTAGTCACGGTTGAGGCGGCAGAGACATTCAGTCTCAACAACCTCGGACGCTTTGCCGATAAGCTGCCGTCAGAACCACGGGAAAATATCGTTTATCAGTGCTGGGAGCGTTTTTGCCAGGAACTGGGTAAGCAAATTCCAGTGGCGATGACCCTGGAAAAGAATATGCCGATCGGTTCGGGCTTAGGCTCCAGTGCCTGTTCGGTGGTCGCGGCGCTGATGGCGATGAATGAACACTGCGGCAAGCCGCTTAATGACACTCGTTTGCTGGCTTTGATGGGCGAGCTGGAAGGCCGTATCTCCGGCAGCATTCATTACGACAACGTGGCACCGTGTTTTCTCGGTGGTATGCAGTTGATGATCGAAGAAAACGACATCATCAGCCAGCAAGTGCCAGGGTTTGATGAGTGGCTGTGGGTGCTGGCGTATCCGGGGATTAAAGTCTCGACGGCAGAAGCCAGGGCTATTTTACCGGCGCAGTATCGCCGCCAGGATTGCATTGCGCACGGGCGACATCTGGCAGGCTTCATTCACGCCTGCTATTCCCGTCAGCCTGAGCTTGCCGCGAAGCTGATGAAAGATGTTATCGCTGAACCCTACCGTGAACGGTTACTGCCAGGCTTCCGGCAGGCGCGGCAGGCGGTCGCGGAAATCGGCGCGGTAGCGAGCGGTATCTCCGGCTCCGGCCCGACCTTGTTCGCTCTGTGTGACAAGCCGGAAACCGCCCAGCGCGTTGCCGACTGGTTGGGTAAGAACTACCTGCAAAATCAGGAAGGTTTTGTTCATATTTGCCGGCTGGATACGGCGGGCGCACGAGTACTGGAAAACTAA", + "dna_sequence_length": 933, + "functions": [ + "homoserine kinase" + ], + "id": "CDS_3", + "location": [ + [ + "NC_000913", + 2801, + "+", + 933 + ] + ], + "md5": "51e827780f3898e4dd50ccc8f7e21e0d", + "parent_gene": "", + "protein_md5": "09fc035645f9509d17d76d9dba33c265", + "protein_translation": "MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETFSLNNLGRFADKLPSEPRENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACSVVAALMAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDIISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQPELAAKLMKDVIAEPYRERLLPGFRQARQAVAEIGAVASGISGSGPTLFALCDKPETAQRVADWLGKNYLQNQEGFVHICRLDTAGARVLEN", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b0004" + ], + [ + "gene_synonym", + "ECK0004" + ], + [ + "gene_synonym", + "thrC" + ], + [ + "gene_synonym", + "EcoGene:EG11000" + ], + [ + "gene_synonym", + "NP_414545.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0000012" + ], + [ + "gene_synonym", + "GI:16127998" + ], + [ + "gene_synonym", + "JW0003" + ], + [ + "gene_synonym", + "GeneID:945198" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00934" + ] + ], + "dna_sequence": "ATGAAACTCTACAATCTGAAAGATCACAACGAGCAGGTCAGCTTTGCGCAAGCCGTAACCCAGGGGTTGGGCAAAAATCAGGGGCTGTTTTTTCCGCACGACCTGCCGGAATTCAGCCTGACTGAAATTGATGAGATGCTGAAGCTGGATTTTGTCACCCGCAGTGCGAAGATCCTCTCGGCGTTTATTGGTGATGAAATCCCACAGGAAATCCTGGAAGAGCGCGTGCGCGCGGCGTTTGCCTTCCCGGCTCCGGTCGCCAATGTTGAAAGCGATGTCGGTTGTCTGGAATTGTTCCACGGGCCAACGCTGGCATTTAAAGATTTCGGCGGTCGCTTTATGGCACAAATGCTGACCCATATTGCGGGTGATAAGCCAGTGACCATTCTGACCGCGACCTCCGGTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAACTGAAAGTGGCGCTAGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGTTGCGCAGCTGCCGCAGGAGACGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGTTTTATTGCTGCGACCAACGTGAACGATACCGTGCCACGTTTCCTGCACGACGGTCAGTGGTCACCCAAAGCGACTCAGGCGACGTTATCCAACGCGATGGACGTGAGTCAGCCGAACAACTGGCCGCGTGTGGAAGAGTTGTTCCGCCGCAAAATCTGGCAACTGAAAGAGCTGGGTTATGCAGCCGTGGATGATGAAACCACGCAACAGACAATGCGTGAGTTAAAAGAACTGGGCTACACTTCGGAGCCGCACGCTGCCGTAGCTTATCGTGCGCTGCGTGATCAGTTGAATCCAGGCGAATATGGCTTGTTCCTCGGCACCGCGCATCCGGCGAAATTTAAAGAGAGCGTGGAAGCGATTCTCGGTGAAACGTTGGATCTGCCAAAAGAGCTGGCAGAACGTGCTGATTTACCCTTGCTTTCACATAATCTGCCCGCCGATTTTGCTGCGTTGCGTAAATTGATGATGAATCATCAGTAA", + "dna_sequence_length": 1287, + "functions": [ + "L-threonine synthase" + ], + "id": "CDS_4", + "location": [ + [ + "NC_000913", + 3734, + "+", + 1287 + ] + ], + "md5": "93b19fb7b37c0b60027e4537f83850d0", + "parent_gene": "", + "protein_md5": "3fe5ee9bcebd44132d18e2b50b8b92c3", + "protein_translation": "MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQLPQETRNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDETTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ", + "protein_translation_length": 428, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yaaX" + ], + [ + "gene_synonym", + "b0005" + ], + [ + "gene_synonym", + "GI:16127999" + ], + [ + "gene_synonym", + "GeneID:944747" + ], + [ + "gene_synonym", + "EcoGene:EG14384" + ], + [ + "gene_synonym", + "ASAP:ABE-0000015" + ], + [ + "gene_synonym", + "NP_414546.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75616" + ], + [ + "gene_synonym", + "JW0004" + ], + [ + "gene_synonym", + "ECK0005" + ] + ], + "dna_sequence": "GTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTATTACTGGGATGGAGGTCACTGGCGCGACCACGGCTGGTGGAAACAACATTATGAATGGCGAGGCAATCGCTGGCACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAA", + "dna_sequence_length": 297, + "functions": [ + "DUF2502 family putative periplasmic protein" + ], + "id": "CDS_5", + "location": [ + [ + "NC_000913", + 5234, + "+", + 297 + ] + ], + "md5": "2a6bf4c86256b6689661779d4366f0cb", + "parent_gene": "", + "protein_md5": "accd217a526db58f0dc94fad2625013a", + "protein_translation": "MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR", + "protein_translation_length": 98, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b0006" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8I3" + ], + [ + "gene_synonym", + "NP_414547.1" + ], + [ + "gene_synonym", + "GeneID:944749" + ], + [ + "gene_synonym", + "GI:16128000" + ], + [ + "gene_synonym", + "yaaA" + ], + [ + "gene_synonym", + "JW0005" + ], + [ + "gene_synonym", + "EcoGene:EG10011" + ], + [ + "gene_synonym", + "ECK0006" + ], + [ + "gene_synonym", + "ASAP:ABE-0000018" + ] + ], + "dna_sequence": "ATGCTGATTCTTATTTCACCTGCGAAAACGCTTGATTACCAAAGCCCGTTGACCACCACGCGCTATACGCTGCCGGAGCTGTTAGACAATTCCCAGCAGTTGATCCATGAGGCGCGGAAACTGACGCCTCCGCAGATTAGCACGCTGATGCGCATCAGCGACAAACTGGCGGGTATCAACGCCGCTCGCTTTCATGACTGGCAGCCAGATTTCACGCCGGCGAATGCCCGCCAGGCGATTCTGGCGTTTAAAGGTGATGTCTACACCGGCTTGCAGGCCGAAACCTTCAGCGAAGACGATTTCGATTTTGCCCAACAGCATTTGCGAATGCTTTCCGGCTTGTATGGCGTACTCCGCCCGCTCGATTTAATGCAGCCTTATCGTCTGGAAATGGGGATCCGTCTTGAGAATGCCCGAGGGAAAGATCTGTATCAATTCTGGGGAGATATCATCACCAACAAGCTGAACGAGGCGCTCGCAGCACAAGGCGATAATGTGGTGATTAATCTGGCGTCAGATGAGTATTTTAAATCGGTGAAGCCGAAGAAATTGAATGCCGAGATTATCAAGCCGGTGTTCCTCGATGAGAAGAACGGCAAATTTAAGATCATCAGCTTCTACGCTAAGAAAGCACGCGGTCTGATGAGTCGTTTCATTATTGAAAATCGGCTGACCAAACCAGAGCAACTGACTGGTTTTAATAGCGAAGGTTACTTCTTTGATGAAGATTCCTCCAGCAATGGCGAACTGGTGTTTAAACGCTACGAGCAGCGTTAA", + "dna_sequence_length": 777, + "functions": [ + "peroxide resistance protein, lowers intracellular iron" + ], + "id": "CDS_6", + "location": [ + [ + "NC_000913", + 6459, + "-", + 777 + ] + ], + "md5": "526cc558d00c8b6a111dc18ae36caa22", + "parent_gene": "", + "protein_md5": "3918eea8540ab18805c356c3e3096954", + "protein_translation": "MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPPQISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALAAQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR", + "protein_translation_length": 258, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b0007" + ], + [ + "gene_synonym", + "EcoGene:EG11555" + ], + [ + "gene_synonym", + "GeneID:944745" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30143" + ], + [ + "gene_synonym", + "GI:16128001" + ], + [ + "gene_synonym", + "NP_414548.1" + ], + [ + "gene_synonym", + "yaaJ" + ], + [ + "gene_synonym", + "JW0006" + ], + [ + "gene_synonym", + "ASAP:ABE-0000020" + ], + [ + "gene_synonym", + "ECK0007" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P75620" + ], + [ + "gene_synonym", + "ASAP:ABE-0000089" + ], + [ + "gene_synonym", + "GeneID:949128" + ], + [ + "gene_synonym", + "b0024" + ], + [ + "gene_synonym", + "NP_414565.1" + ] + ], + "dna_sequence": "ATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGTTTCTTCCCGTGATTTGCGCCATGGCAATGAAAAGCCACTTCTTTCTGATTTCGGTACTCAATCGCCGGTTAACCTTGACCGCTGTACAAGGTATACTCGGACGATTTTCACTGTTTTGA", + "dna_sequence_length": 219, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_23", + "location": [ + [ + "NC_000913", + 21181, + "+", + 219 + ] + ], + "md5": "632d9c89eeed63443296c35601b7374a", + "parent_gene": "", + "protein_md5": "ba6191e60d52aa485969dd92928859eb", + "protein_translation": "MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGQFLPVICAMAMKSHFFLISVLNRRLTLTAVQGILGRFSLF", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:949129" + ], + [ + "gene_synonym", + "ECK0026" + ], + [ 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"gene_synonym", + "ECK0040" + ], + [ + "gene_synonym", + "GeneID:949064" + ], + [ + "gene_synonym", + "yaaO" + ], + [ + "gene_synonym", + "NP_414581.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60584" + ], + [ + "gene_synonym", + "ASAP:ABE-0000139" + ], + [ + "gene_synonym", + "JW0038" + ] + ], + "dna_sequence": 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"GI:90111081" + ], + [ + "gene_synonym", + "yaaQ" + ], + [ + "gene_synonym", + "EcoGene:EG11562" + ], + [ + "gene_synonym", + "b0041" + ], + [ + "gene_synonym", + "ASAP:ABE-0000145" + ], + [ + "gene_synonym", + "ECK0042" + ], + [ + "gene_synonym", + "GeneID:947316" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60566" + ], + [ + "gene_synonym", + "fixA" + ] + ], + "dna_sequence": 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"protein_translation_length": 968, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_414602.1" + ], + [ + "gene_synonym", + "dinA" + ], + [ + "gene_synonym", + "EcoGene:EG10747" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21189" + ], + [ + "gene_synonym", + "JW0059" + ], + [ + "gene_synonym", + "GeneID:944779" + ], + [ + "gene_synonym", + "b0060" + ], + [ + "gene_synonym", + "polB" + ], + [ + "gene_synonym", + "ASAP:ABE-0000202" + ], + [ + "gene_synonym", + "GI:16128054" + ], + [ + "gene_synonym", + "ECK0061" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P08203" + ], + [ + "gene_synonym", + "ASAP:ABE-0000209" + ], + [ + "gene_synonym", + "b0061" + ], + [ + "gene_synonym", + "araD" + ], + [ + "gene_synonym", + "JW0060" + ], + [ + "gene_synonym", + "GeneID:945294" + ], + [ + "gene_synonym", + "GI:16128055" + ], + [ + "gene_synonym", + "ECK0062" + ] + ], + "dna_sequence": 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"protein_translation": "MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000221" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08202" + ], + [ + "gene_synonym", + "GeneID:947511" + ], + [ + "gene_synonym", + "NP_414604.1" + ], + [ + "gene_synonym", + "GI:16128056" + ], + [ + "gene_synonym", + "araA" + ], + [ + "gene_synonym", + "b0062" + ], + [ + "gene_synonym", + "JW0061" + ], + [ + "gene_synonym", + "ECK0063" + ], + [ + "gene_synonym", + "EcoGene:EG10052" + ] + ], + "dna_sequence": 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"06c9588bcc6976883e1948953189ed41", + "protein_translation": "MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTIDGVDHTTMPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAVQQGKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGMTNELLSGKASASALLGITG", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:944784" + ], + [ + "gene_synonym", + "NP_414609.1" + ], + [ + "gene_synonym", + "GI:16128061" + ], + [ + "gene_synonym", + "EcoGene:EG11573" + ], + [ + "gene_synonym", + "thiP" + ], + [ + "gene_synonym", + "b0067" + ], + [ + "gene_synonym", + "ASAP:ABE-0000246" + ], + [ + "gene_synonym", + "ECK0068" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31549" + ], + [ + "gene_synonym", + "yabK" + ], + [ + "gene_synonym", + "sfuB" + ], + [ + "gene_synonym", + "JW0066" + ] + ], + "dna_sequence": 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"ASAP:ABE-0000249" + ], + [ + "gene_synonym", + "GI:16128062" + ], + [ + "gene_synonym", + "EcoGene:EG11574" + ], + [ + "gene_synonym", + "NP_414610.1" + ], + [ + "gene_synonym", + "b0068" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31550" + ], + [ + "gene_synonym", + "ECK0069" + ], + [ + "gene_synonym", + "thiB" + ], + [ + "gene_synonym", + "GeneID:946306" + ], + [ + "gene_synonym", + "tbpA" + ], + [ + "gene_synonym", + "yabL" + ], + [ + "gene_synonym", + "sfuA" + ], + [ + "gene_synonym", + "JW0067" + ] + ], + "dna_sequence": 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"dna_sequence_length": 984, + "functions": [ + "thiamine/thiamine pyrophosphate/thiamine monophosphate ABC transporter periplasmic binding protein" + ], + "id": "CDS_66", + "location": [ + [ + "NC_000913", + 75480, + "-", + 984 + ] + ], + "md5": "81eb1327d7709eae49c1f0aa94a3742f", + "parent_gene": "", + "protein_md5": "6621e2a53c142e7c0bfdc9a1644d2429", + "protein_translation": "MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_414611.1" + ], + [ + "gene_synonym", + "GI:16128063" + ], + [ + "gene_synonym", + "JW0068" + ], + [ + "gene_synonym", + "GeneID:944788" + ], + [ + "gene_synonym", + "sgrR" + ], + [ + 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"ATGATGGAAAACTATAAACATACTACGGTGCTGCTGGATGAAGCCGTTAATGGCCTCAATATCCGTCCTGATGGCATCTACATTGATGGGACTTTTGGTCGCGGTGGTCACTCACGTCTGATCCTCTCGCAGCTTGGCGAAGAGGGGCGTTTGCTGGCGATCGATCGCGACCCGCAGGCTATCGCCGTTGCGAAGACTATTGATGATCCGCGCTTCTCCATCATCCACGGACCTTTCTCCGCGCTGGGCGAATACGTTGCCGAGCGCGATCTTATCGGCAAGATCGACGGCATTCTCCTCGATCTTGGCGTCTCTTCACCGCAACTTGATGATGCTGAACGTGGCTTTTCCTTTATGCGCGATGGTCCGCTGGACATGCGTATGGACCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAGTCGTGGCTGCTGCAACGCCGGTGAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAACTGGAGGAGATAGAGCAGGCGCTAAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATTGTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCGCAAGTTCCGGCAGGGTTACCGATGACTGAAGAGCAGCTCAAAAAACTGGGTGGCCGTCAGCTGCGAGCACTAGGCAAGTTAATGCCGGGCGAAGAAGAGGTGGCTGAGAACCCTCGTGCCCGTAGTTCAGTTCTGCGTATTGCAGAGAGGACGAATGCATGA", + "dna_sequence_length": 942, + "functions": [ + "16S 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"MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFICIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIATEKLQMQHVDPSQENIVVQK", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:944799" + ], + [ + "gene_synonym", + "GI:16128077" + ], + [ + "gene_synonym", + "ASAP:ABE-0000309" + ], + [ + "gene_synonym", + "sep" + ], + [ + "gene_synonym", + "ftsI" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD68" + ], + [ + "gene_synonym", + "pbpB" + ], + [ + "gene_synonym", + "ECK0085" + ], + [ + "gene_synonym", + "NP_414626.1" + ], + [ + "gene_synonym", + "b0084" + ], + [ + "gene_synonym", + "EcoGene:EG10341" + ], + [ + "gene_synonym", + "JW0082" + ] + ], + "dna_sequence": "ATGAAAGCAGCGGCGAAAACGCAGAAACCAAAACGTCAGGAAGAACATGCCAACTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTATCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTGACCGTTCTGGTCGCCCGTTAGCGGTGAGCGTGCCGGTAAAAGCGATTTGGGCTGACCCGAAAGAAGTGCATGACGCTGGCGGTATCAGCGTCGGTGACCGCTGGAAGGCGCTGGCTAACGCGCTCAATATTCCGCTGGATCAGCTTTCAGCCCGCATTAACGCCAACCCGAAAGGGCGCTTTATTTATCTGGCGCGTCAGGTGAACCCTGACATGGCGGACTACATCAAAAAACTGAAACTGCCGGGGATTCATCTGCGTGAAGAGTCTCGCCGTTACTATCCGTCCGGCGAAGTGACTGCTCACCTCATCGGCTTTACTAACGTCGATAGTCAAGGGATTGAGGGCGTTGAGAAGAGTTTCGATAAATGGCTTACCGGGCAGCCGGGTGAGCGCATTGTGCGTAAAGACCGCTATGGTCGCGTAATTGAAGATATTTCTTCTACTGACAGCCAGGCAGCGCACAACCTGGCGCTGAGTATTGATGAACGCCTGCAGGCGCTGGTTTATCGCGAACTGAACAACGCGGTGGCCTTTAACAAGGCTGAATCTGGTAGCGCCGTGCTGGTGGATGTCAACACCGGTGAAGTGCTGGCGATGGCTAACAGCCCGTCATACAACCCTAACAATCTGAGCGGCACGCCGAAAGAGGCGATGCGTAACCGTACCATCACCGACGTGTTTGAACCGGGCTCAACGGTTAAACCGATGGTGGTAATGACCGCGTTGCAACGTGGCGTGGTGCGGGAAAACTCGGTACTCAATACCATTCCTTATCGAATTAACGGCCACGAAATCAAAGACGTGGCACGCTACAGCGAATTAACCCTGACCGGGGTATTACAGAAGTCGAGTAACGTCGGTGTTTCCAAGCTGGCGTTAGCGATGCCGTCCTCAGCGTTAGTAGATACTTACTCACGTTTTGGACTGGGAAAAGCGACCAATTTGGGGTTGGTCGGAGAACGCAGTGGCTTATATCCTCAAAAACAACGGTGGTCTGACATAGAGAGGGCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGTTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTAAAACCGGTACCGCGAAAAAGGTCGGGCCGGACGGTCGCTACATCAATAAATATATTGCTTATACCGCAGGCGTTGCGCCTGCGAGTCAGCCGCGCTTCGCGCTGGTTGTTGTTATCAACGATCCGCAGGCGGGTAAATACTACGGCGGCGCCGTTTCCGCGCCGGTCTTTGGTGCCATCATGGGCGGCGTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAA", 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"protein_translation_length": 588, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:944791" + ], + [ + "gene_synonym", + "GI:16128078" + ], + [ + "gene_synonym", + "murE" + ], + [ + "gene_synonym", + "ASAP:ABE-0000311" + ], + [ + "gene_synonym", + "NP_414627.1" + ], + [ + "gene_synonym", + "JW0083" + ], + [ + "gene_synonym", + "EcoGene:EG10621" + ], + [ + "gene_synonym", + "ECK0086" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22188" + ], + [ + "gene_synonym", + "b0085" + ] + ], + "dna_sequence": "GTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGACGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGTGTGGCTGCCATTATTGCAGAGGCGAAAGATGAGGCGACCGATGGTGAAATCCGTGAAATGCACGGCGTACCGGTCATCTATCTCAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCTGGTGGATCAGGGCGCGACGTTTTGCGCAATGGAAGTTTCCTCCCACGGGCTGGTACAGCACCGTGTGGCGGCATTGAAATTTGCGGCGTCGGTCTTTACCAACTTAAGCCGCGATCACCTTGATTATCATGGTGATATGGAACACTACGAAGCCGCGAAATGGCTGCTTTATTCTGAGCATCATTGCGGTCAGGCGATTATTAACGCCGACGATGAAGTGGGCCGCCGCTGGCTGGCAAAACTGCCGGACGCGGTTGCGGTATCAATGGAAGATCATATTAATCCGAACTGTCACGGACGCTGGTTGAAAGCGACCGAAGTGAACTATCACGACAGCGGTGCGACGATTCGCTTTAGCTCAAGTTGGGGCGATGGCGAAATTGAAAGCCATCTGATGGGCGCTTTTAACGTCAGCAACCTGCTGCTCGCGCTGGCGACACTGTTGGCACTCGGCTATCCACTGGCTGATCTGCTGAAAACCGCCGCGCGTCTGCAACCGGTTTGCGGACGTATGGAAGTGTTCACTGCGCCAGGCAAACCGACGGTGGTGGTGGATTACGCGCATACGCCGGATGCACTGGAAAAAGCCTTACAGGCGGCGCGTCTGCACTGTGCGGGCAAGCTGTGGTGTGTCTTTGGCTGTGGTGGCGATCGCGATAAAGGTAAGCGTCCACTGATGGGCGCAATTGCCGAAGAGTTTGCTGACGTGGCGGTGGTGACGGACGATAACCCGCGTACCGAAGAACCGCGTGCCATCATCAACGATATTCTGGCGGGAATGTTAGATGCCGGACATGCCAAAGTGATGGAAGGCCGTGCTGAAGCGGTGACTTGCGCCGTTATGCAGGCTAAAGAGAATGATGTGGTACTGGTCGCGGGCAAAGGCCATGAAGATTACCAGATTGTTGGCAATCAGCGTCTGGACTACTCCGATCGCGTCACGGTGGCGCGTCTGCTGGGGGTGATTGCATGA", 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"ATGATTAGCGTAACCCTTAGCCAACTTACCGACATTCTCAACGGTGAACTGCAAGGTGCAGATATCACCCTTGATGCTGTAACCACTGATACCCGAAAACTGACGCCGGGCTGCCTGTTTGTTGCCCTGAAAGGCGAACGTTTTGATGCCCACGATTTTGCCGACCAGGCGAAAGCTGGCGGCGCAGGCGCACTACTGGTTAGCCGTCCGCTGGACATCGACCTGCCGCAGTTAATCGTCAAGGATACGCGTCTGGCGTTTGGTGAACTGGCTGCATGGGTTCGCCAGCAAGTTCCGGCGCGCGTGGTTGCTCTGACGGGGTCCTCCGGCAAAACCTCCGTTAAAGAGATGACGGCGGCGATTTTAAGCCAGTGCGGCAACACGCTTTATACGGCAGGCAATCTCAACAACGACATCGGTGTACCGATGACGCTGTTGCGCTTAACGCCGGAATACGATTACGCAGTTATTGAACTTGGCGCGAACCATCAGGGCGAAATAGCCTGGACTGTGAGTCTGACTCGCCCGGAAGCTGCGCTGGTCAACAACCTGGCAGCGGCGCATCTGGAAGGTTTTGGCTCGCTTGCGGGTGTCGCGAAAGCGAAAGGTGAAATCTTTAGCGGCCTGCCGGAAAACGGTATCGCCATTATGAACGCCGACAACAACGACTGGCTGAACTGGCAGAGCGTAATTGGCTCACGCAAAGTGTGGCGTTTCTCACCCAATGCCGCCAACAGCGATTTCACCGCCACCAATATCCATGTGACCTCGCACGGTACGGAATTTACCCTACAAACCCCAACCGGTAGCGTCGATGTTCTGCTGCCGTTGCCGGGGCGTCACAATATTGCGAATGCGCTGGCAGCCGCTGCGCTCTCCATGTCCGTGGGCGCAACGCTTGATGCTATCAAAGCGGGGCTGGCAAATCTGAAAGCTGTTCCAGGCCGTCTGTTCCCCATCCAACTGGCAGAAAACCAGTTGCTGCTCGACGACTCCTACAACGCCAATGTCGGTTCAATGACTGCAGCAGTCCAGGTACTGGCTGAAATGCCGGGCTACCGCGTGCTGGTGGTGGGCGATATGGCGGAACTGGGCGCTGAAAGCGAAGCCTGCCATGTACAGGTGGGCGAGGCGGCAAAAGCTGCTGGTATTGACCGCGTGTTAAGCGTGGGTAAACAAAGCCATGCTATCAGCACCGCCAGCGGCGTTGGCGAACATTTTGCTGATAAAACTGCGTTAATTACGCGTCTTAAATTACTGATTGCTGAGCAACAGGTAATTACGATTTTAGTTAAGGGTTCACGTAGTGCCGCCATGGAAGAGGTAGTACGCGCTTTACAGGAGAATGGGACATGTTAG", 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], + [ + "gene_synonym", + "GeneID:944818" + ], + [ + "gene_synonym", + "JW0086" + ], + [ + "gene_synonym", + "GI:16128081" + ], + [ + "gene_synonym", + "NP_414630.1" + ], + [ + "gene_synonym", + "ECK0089" + ] + ], + "dna_sequence": "ATGGCTGATTATCAGGGTAAAAATGTCGTCATTATCGGCCTGGGCCTCACCGGGCTTTCCTGCGTGGACTTTTTCCTCGCTCGCGGTGTGACGCCGCGCGTTATGGATACGCGTATGACACCGCCTGGCCTGGATAAATTACCCGAAGCCGTAGAACGCCACACGGGCAGTCTGAATGATGAATGGCTGATGGCGGCAGATCTGATTGTCGCCAGTCCCGGTATTGCACTGGCGCATCCATCCTTAAGCGCTGCCGCTGATGCCGGAATCGAAATCGTTGGCGATATCGAGCTGTTCTGTCGCGAAGCACAAGCACCGATTGTGGCGATTACCGGTTCTAACGGCAAAAGCACGGTCACCACGCTAGTGGGTGAAATGGCGAAAGCGGCGGGGGTTAACGTTGGTGTGGGTGGCAATATTGGCCTGCCTGCGTTGATGCTACTGGATGATGAGTGTGAACTGTACGTGCTGGAACTGTCGAGCTTCCAGCTGGAAACCACCTCCAGCTTACAGGCGGTAGCAGCGACCATTCTGAACGTGACTGAAGATCATATGGATCGCTATCCGTTTGGTTTACAACAGTATCGTGCAGCAAAACTGCGCATTTACGAAAACGCGAAAGTTTGCGTGGTTAATGCTGATGATGCCTTAACAATGCCGATTCGCGGTGCGGATGAACGCTGCGTCAGCTTTGGCGTCAACATGGGTGACTATCACCTGAATCATCAGCAGGGCGAAACCTGGCTGCGGGTTAAAGGCGAGAAAGTGCTGAATGTGAAAGAGATGAAACTTTCCGGGCAGCATAACTACACCAATGCGCTGGCGGCGCTGGCGCTGGCAGATGCTGCAGGGTTACCGCGTGCCAGCAGCCTGAAAGCGTTAACCACATTCACTGGTCTGCCGCATCGCTTTGAAGTTGTGCTGGAGCATAACGGCGTACGTTGGATTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACGTAGACGGCACACTGCATTTGTTGCTGGGTGGCGATGGTAAATCGGCGGACTTTAGCCCACTGGCGCGTTACCTGAATGGCGATAACGTACGTCTGTATTGTTTCGGTCGTGACGGCGCGCAGCTGGCGGCGCTACGCCCGGAAGTGGCAGAACAAACCGAAACTATGGAACAGGCGATGCGCTTGCTGGCTCCGCGTGTTCAGCCGGGCGATATGGTTCTGCTCTCCCCAGCCTGTGCCAGCCTTGATCAGTTCAAGAACTTTGAACAACGAGGCAATGAGTTTGCCCGTCTGGCGAAGGAGTTAGGTTGA", 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"gene_synonym", + "ftsW" + ], + [ + "gene_synonym", + "ECK0090" + ], + [ + "gene_synonym", + "ASAP:ABE-0000320" + ], + [ + "gene_synonym", + "b0089" + ], + [ + "gene_synonym", + "GI:16128082" + ], + [ + "gene_synonym", + "EcoGene:EG10344" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABG4" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "GeneID:946324" + ], + [ + "gene_synonym", + "JW0090" + ], + [ + "gene_synonym", + "EcoGene:EG10214" + ], + [ + "gene_synonym", + "ASAP:ABE-0000326" + ], + [ + "gene_synonym", + "ECK0093" + ], + [ + "gene_synonym", + "NP_414634.1" + ], + [ + "gene_synonym", + "ddl" + ], + [ + "gene_synonym", + "ddlB" + ], + [ + "gene_synonym", + "b0092" + ] + ], + "dna_sequence": 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ligase" + ], + "id": "CDS_90", + "location": [ + [ + "NC_000913", + 102233, + "+", + 921 + ] + ], + "md5": "ee3cc820d83220e0cbe878dc1564cc51", + "parent_gene": "", + "protein_md5": "54e611311e0e2a239edc3e7c5749607a", + "protein_translation": "MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLSDETQYFCPAGLEASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVRILELAD", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ftsQ" + ], + [ + "gene_synonym", + "JW0091" + ], + [ + "gene_synonym", + "GeneID:944823" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06136" + ], + [ + "gene_synonym", + "GI:16128086" + ], + [ + "gene_synonym", + "NP_414635.1" + ], + [ + "gene_synonym", + "ECK0094" + ], + [ + "gene_synonym", + "b0093" + ], + [ + "gene_synonym", + 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"ASAP:ABE-0000331" + ], + [ + "gene_synonym", + "GeneID:944778" + ], + [ + "gene_synonym", + "ECK0095" + ], + [ + "gene_synonym", + "b0094" + ] + ], + "dna_sequence": 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"GI:16128088" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9A6" + ], + [ + "gene_synonym", + "b0095" + ], + [ + "gene_synonym", + "ASAP:ABE-0000333" + ], + [ + "gene_synonym", + "ECK0096" + ], + [ + "gene_synonym", + "EcoGene:EG10347" + ], + [ + "gene_synonym", + "sfiB" + ], + [ + "gene_synonym", + "ftsZ" + ], + [ + "gene_synonym", + "sulB" + ] + ], + "dna_sequence": 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"protein_translation_length": 630, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "lpd" + ], + [ + "gene_synonym", + "GeneID:944854" + ], + [ + "gene_synonym", + "NP_414658.1" + ], + [ + "gene_synonym", + "b0116" + ], + [ + "gene_synonym", + "lpdA" + ], + [ + "gene_synonym", + "GI:16128109" + ], + [ + "gene_synonym", + "EcoGene:EG10543" + ], + [ + "gene_synonym", + "dhl" + ], + [ + "gene_synonym", + "ASAP:ABE-0000404" + ], + [ + "gene_synonym", + "JW0112" + ], + [ + "gene_synonym", + "ECK0115" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9P0" + ] + ], + "dna_sequence": 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"gene_synonym", + "b0123" + ], + [ + "gene_synonym", + "NP_414665.1" + ], + [ + "gene_synonym", + "yacK" + ], + [ + "gene_synonym", + "ECK0122" + ], + [ + "gene_synonym", + "cuiD" + ], + [ + "gene_synonym", + "cueO" + ], + [ + "gene_synonym", + "ASAP:ABE-0000430" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36649" + ], + [ + "gene_synonym", + "JW0119" + ], + [ + "gene_synonym", + "EcoGene:EG12318" + ], + [ + "gene_synonym", + "GeneID:947736" + ] + ], + "dna_sequence": 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"location": [ + [ + "NC_000913", + 143702, + "+", + 771 + ] + ], + "md5": "54a08dccd0aead8b26eec27035a4bf14", + "parent_gene": "", + "protein_md5": "b33785388ed7fee27027fd1c6f05e055", + "protein_translation": "MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS", + "protein_translation_length": 256, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:947397" + ], + [ + "gene_synonym", + "yadI" + ], + [ + "gene_synonym", + "ASAP:ABE-0000453" + ], + [ + "gene_synonym", + "EcoGene:EG12322" + ], + [ + "gene_synonym", + "JW0125" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36881" + ], + [ + "gene_synonym", + "agaX" + ], + [ + "gene_synonym", + "GI:16128122" + ], + [ + "gene_synonym", + "b0129" + ], + [ + "gene_synonym", + "NP_414671.1" + ], + [ + "gene_synonym", 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binding protein" + ], + "id": "CDS_148", + "location": [ + [ + "NC_000913", + 170575, + "+", + 891 + ] + ], + "md5": "6127f8980ba16c80af58b458f6eab77f", + "parent_gene": "", + "protein_md5": "3dc6f035d807193f2faa8c058a64169a", + "protein_translation": "MSGLPLISRRRLLTAMALSPLLWQMNTAHAAAIDPNRIVALEWLPVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVWSAGYGPSPEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYEDFIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWGSTAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRAGRFQRVPAVWFYGATLSAMHFVRVLDNAIGGKA", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK0152" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06972" + ], + [ + "gene_synonym", + "GeneID:946890" + ], + [ + "gene_synonym", + "GI:16128146" + ], + [ + "gene_synonym", + "EcoGene:EG10303" + ], + [ + "gene_synonym", + "b0153" + ], + [ + "gene_synonym", + "JW0149" + ], + [ + "gene_synonym", + "NP_414695.1" + ], + [ + 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"MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWDEYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWFFEYALGQAEDIAIRMRQYTDEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKHDLPGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLMPGEMLTKESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLKMAG", + "protein_translation_length": 713, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:90111096" + ], + [ + "gene_synonym", + "yaeR" + ], + [ + "gene_synonym", + "NP_414729.4" + ], + [ + "gene_synonym", + "JW0182" + ], + [ + "gene_synonym", + "EcoGene:EG13224" + ], 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"gene_synonym", + "GeneID:944921" + ], + [ + "gene_synonym", + "lafU" + ], + [ + "gene_synonym", + "EcoGene:EG13143" + ], + [ + "gene_synonym", + "mbhA" + ], + [ + "gene_synonym", + "ASAP:ABE-0000785" + ], + [ + "gene_synonym", + "b0230" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47154" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16128218" + ], + [ + "gene_synonym", + "JW0222" + ], + [ + "gene_synonym", + "NP_414767.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47156" + ] + ], + "dna_sequence": "ATGCATCGAATTCTCGCTGAAAAATCGGTCAATATCACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAAAGCCCATAAAGGCGCGCTTCCGTCCAAGTGCTGCAAGATTAGAGGAAATTACACGCCGCGCTGAACAATATCTTAATGATATGACGGATGATGATTTCAATGACTTTAAGGAATAA", + "dna_sequence_length": 294, + "functions": [ + "antitoxin of the YafO-YafN toxin-antitoxin system" + ], + "id": "CDS_223", + "location": [ + [ + "NC_000913", + 252005, + "+", + 294 + ] + ], + "md5": "5c96f049f8670093c54010697eee88c2", + "parent_gene": "", + "protein_md5": "ecc5a635e995e76849ec0f547771981e", + "protein_translation": "MHRILAEKSVNITELRKNPAKYFIDQPVAVLSNNRPAGYLLSASAFEALMDMLAEQEEKKPIKARFRPSAARLEEITRRAEQYLNDMTDDDFNDFKE", + "protein_translation_length": 97, + "type": "CDS" + }, + { + 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"gene_synonym", + "ECK0241" + ], + [ + "gene_synonym", + "JW0230" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24251" + ], + [ + "gene_synonym", + "b0240" + ], + [ + "gene_synonym", + "EcoGene:EG11092" + ], + [ + "gene_synonym", + "crl" + ] + ], + "dna_sequence": "ATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGAAGTGGTTGAACGACTGGAGCACACCCTGCGTGAGTTTCACGAGAAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGA", + "dna_sequence_length": 402, + "id": "CDS_231", + "location": [ + [ + "NC_000913", + 257829, + "+", + 71 + ], + [ + "NC_000913", + 258676, + "+", + 331 + ] + ], + "md5": "f6cc46cda3db482cf261efa371a888ca", + "parent_gene": "", + "protein_md5": "214b4b54f12329f8906ac58e750461cd", + "protein_translation": "MTLPSGHPKSRLIKKFTALGPYIREGKCKDNRFFFDCLAVCVNVKPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLREFHEKLRELLTTLNLKLEPADDFRDEPVKLTA", + "protein_translation_length": 133, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02932" + ], + [ + "gene_synonym", + "ASAP:ABE-0000823" + ], + [ + "gene_synonym", + "GeneID:944926" + ], + [ + "gene_synonym", + "ECK0242" + ], + [ + "gene_synonym", + "ompE" + ], + [ + "gene_synonym", + "JW0231" + ], + [ + "gene_synonym", + "NP_414776.1" + ], + [ + "gene_synonym", + "phoE" + ], + [ + "gene_synonym", + "GI:16128227" + ], + [ + "gene_synonym", + "b0241" + ], + [ + "gene_synonym", + "EcoGene:EG10729" + ] + ], + "dna_sequence": 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"gene_synonym", + "pro" + ], + [ + "gene_synonym", + "ASAP:ABE-0000830" + ], + [ + "gene_synonym", + "GI:16128228" + ], + [ + "gene_synonym", + "b0242" + ], + [ + "gene_synonym", + "proB" + ], + [ + "gene_synonym", + "ECK0243" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "ASAP:ABE-0000893" + ], + [ + "gene_synonym", + "mmuP" + ], + [ + "gene_synonym", + "EcoGene:EG13342" + ], + [ + "gene_synonym", + "GeneID:946284" + ], + [ + "gene_synonym", + "ECK0262" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_414801.1" + ], + [ + "gene_synonym", + "yagA" + ], + [ + "gene_synonym", + "EcoGene:EG12338" + ], + [ + "gene_synonym", + "ECK0268" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37007" + ], + [ + "gene_synonym", + "JW0260" + ] + ], + "dna_sequence": 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"protein_translation_length": 655, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b0270" + ], + [ + "gene_synonym", + "GI:16128255" + ], + [ + "gene_synonym", + "yagG" + ], + [ + "gene_synonym", + "NP_414804.1" + ], + [ + "gene_synonym", + "GeneID:944947" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75683" + ], + [ + "gene_synonym", + "ASAP:ABE-0000929" + ], + [ + "gene_synonym", + "JW0263" + ], + [ + "gene_synonym", + "EcoGene:EG13346" + ], + [ + "gene_synonym", + "ECK0271" + ] + ], + "dna_sequence": 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"c1da6a7bdffbc7cef17e117bab483152", + "parent_gene": "", + "protein_md5": "4f66db19180d454d04bf08c00c68855d", + "protein_translation": "MPIIQSVERALQILDLFNEQATELKITDISKLMGLSKSTLHSLLKTLQLHGYIDQNPENGKYRLGMKLVERGHFVVGSIDIRQKAKGWLTELSRRTGQTTHLGILDGREGVYIEKIEGKLAAIAYSRIGRRLPVHATAIGKVLIAWLGEAELNALLEGYQYTTFTPATLASREALMSALAQTREQGYALDSEENEQGVRCVAVPVWNHESRVIAALSLSTLTSRVDDAELANFREQLQQAGLALSRALGYPA", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06960" + ], + [ + "gene_synonym", + "b0273" + ], + [ + "gene_synonym", + "GI:16128258" + ], + [ + "gene_synonym", + "Arg5" + ], + [ + "gene_synonym", + "GeneID:944844" + ], + [ + "gene_synonym", + "NP_414807.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0000939" + ], + [ + "gene_synonym", + "EcoGene:EG10067" + ], + [ + "gene_synonym", + "ECK0274" + ], + [ + "gene_synonym", + "argD" + ], + [ + "gene_synonym", + "JW0266" + ], + [ + "gene_synonym", + "argF" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P0CF27" + ] + ], + "dna_sequence": "ATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGATACGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCAGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA", + "dna_sequence_length": 504, + "functions": [ + "IS1 transposase B" + ], + "id": "CDS_270", + "location": [ + [ + "NC_000913", + 291152, + "-", + 504 + ] + ], + "md5": "b3b6d14e187a3d92aafdf329f45ef694", + "parent_gene": "", + "protein_md5": "7d37bc43f614740314039784eef22b64", + "protein_translation": 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"MKKKVLAIALVTVFTGMGVAQAADVTAQAVATWSATAKKDTTSKLVVTPLGSLAFQYAEGIKGFNSQKGLFDVAIEGDSTATAFKLTSRLITNTLTQLDTSGSTLNVGVDYNGAAVEKTGDTVMIDTANGVLGGNLSPLANGYNASNRTTAQDGFTFSIISGTTNGTTAVTDYSTLPEGIWSGDVSVQFDATWTS", + "protein_translation_length": 195, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW5031" + ], + [ + "gene_synonym", + "NP_414828.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71301" + ], + [ + "gene_synonym", + "ecpR" + ], + [ + "gene_synonym", + "ASAP:ABE-0001011" + ], + [ + "gene_synonym", + "EcoGene:EG14324" + ], + [ + "gene_synonym", + "GI:16128279" + ], + [ + "gene_synonym", + "GeneID:944966" + ], + [ + "gene_synonym", + "ECK0293" + ], + [ + "gene_synonym", + "matA" + ], + [ + "gene_synonym", + "ykgK" + ], + [ + "gene_synonym", + "b0294" + ] + ], + "dna_sequence": 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"functions": [ + "uncharacterized protein" + ], + "id": "CDS_292", + "location": [ + [ + "NC_000913", + 312112, + "+", + 228 + ] + ], + "md5": "96af576be5b5e04bf2ffb7e48e4ef560", + "parent_gene": "", + "protein_md5": "043dcc3b0fa38e1433ad27639e6f71d5", + "protein_translation": "MQAAPQREETEWRVQSKRGLMPAYRGEAGQQVNIKIMEYSERNVRQLASNEQEEYIPRKINVGVINTPTLIRSDY", + "protein_translation_length": 75, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW5034" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2EEQ2" + ], + [ + "gene_synonym", + "GeneID:1450238" + ], + [ + "gene_synonym", + "ECK0295" + ], + [ + "gene_synonym", + "GI:94541137" + ], + [ + "gene_synonym", + "rpmJ2" + ], + [ + "gene_synonym", + "b4506" + ], + [ + "gene_synonym", + "YP_588437.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0285027" + ], + [ + "gene_synonym", + "ykgO" + ], + [ + "gene_synonym", + "EcoGene:EG14432" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16128299" + ] + ], + "dna_sequence": 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"NP_414849.1" + ], + [ + "gene_synonym", + "GeneID:947459" + ], + [ + "gene_synonym", + "JW0307" + ], + [ + "gene_synonym", + "GI:16128300" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21514" + ] + ], + "dna_sequence": 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"gene_synonym", + "b0316" + ], + [ + "gene_synonym", + "GI:16128301" + ], + [ + "gene_synonym", + "GeneID:945278" + ], + [ + "gene_synonym", + "yahB" + ], + [ + "gene_synonym", + "EcoGene:EG13586" + ] + ], + "dna_sequence": 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DNA-bindng transcriptional regulator" + ], + "id": "CDS_315", + "location": [ + [ + "NC_000913", + 334433, + "-", + 933 + ] + ], + "md5": "75c33bf75d1471ecd15936b535931964", + "parent_gene": "", + "protein_md5": "bf3a36c82504415bbb000c2636d22a7e", + "protein_translation": "MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQDLLHREN", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77219" + ], + [ + "gene_synonym", + "yahC" + ], + [ + "gene_synonym", + "NP_414851.1" + ], + [ + "gene_synonym", + "GeneID:947337" + ], + [ + "gene_synonym", + "ASAP:ABE-0001091" + ], + [ + "gene_synonym", + "JW0309" + ], + [ + "gene_synonym", + "GI:16128302" + ], + [ + "gene_synonym", + "b0317" + ], + [ + "gene_synonym", + "EcoGene:EG13587" + ], + [ + "gene_synonym", + "ECK0315" + ] + ], + "dna_sequence": "ATGAACGGACTCACGGCAACGGGTGTCACCGTCGGTATTTGTGCAGGGCTTTGGCAGTTAGTGTCTTCACATGTCGGGCTCTCTCAAGGATGGGAATTATTAGGAACCATTGGCTTCGTCGCCTTTTGCAGTTTTTATGCCGCAGGCGGCGGTAAATCGGGGTTTATCAGAAGTCTGGCGGTTAATTATTCCGGGATGGTGTGGGCGTTTTTCGCCGCGCTGACTGCTGGTTGGCTGGCCTCTGTAAGTGGACTGTCCGCGTTCTGGGCGAGCGTAATTACTACCGTACCCTTCTCGGCGGTAGTGGTCTGGCAAGGGCGTTTCTGGTTACTGTCCTTTATTCCCGGTGGCTTTCTCGGCATGACGCTGTTTTTTGCCAGCGGGATGAACTGGACGGTGACGTTACTGGGTTTTCTGGCGGGTAACTGCGTGGGGGTAATTTCAGAATATGGTGGACAAAAATTAAGCGAAGCGACGACTAAACGCGACGGGTATTAA", + "dna_sequence_length": 498, + "functions": [ + "putative inner membrane protein" + ], + "id": "CDS_316", + "location": [ + [ + "NC_000913", + 335022, + "-", + 498 + ] + ], + "md5": "89f6469dc519e91a5050a281c000a745", + "parent_gene": "", + "protein_md5": "0235befc034c930aa28b7f4ceca7b4c8", + "protein_translation": 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"ATGTCAGTTAAAATAGTCATTAAACCGAATACCTATTTTGATTCTGTCTCGCTGATGTCTATCTCCACGCGTGCAAATAAACTCGACGGCGTCGAGCAGGCATTTGTGGCGATGGCGACCGAAATGAATAAAGGCGTGCTGAAGAATTTAGGACTGCTGACGCCGGAGCTGGAGCAGGCGAAAAACGGCGACCTGATGATTGTCATCAATGGTAAATCGGGTGCGGACAACGAGCAGTTACTGGTGGAGATTGAAGAACTGTTCAACACCAAAGCGCAAAGCGGCTCGCACGAGGCGCGTTACGCCACTATTGGCAGCGCCAAAAAGCATATCCCGGAAAGTAACCTGGCGGTGATTTCGGTCAACGGTCTGTTTGCCGCTCGCGAAGCGCGTCAGGCGCTGCAAAACGATCTCAACGTGATGCTGTTTTCCGATAACGTCTCAGTTGAAGATGAACTGGCGCTCAAGCAACTGGCCCACGAAAAAGGGCTGCTGATGATGGGGCCAGACTGTGGCACGGCGATTATCAACGGCGCGGCGCTCTGTTTTGGTAACGCCGTGCGTCGCGGCAACATCGGTATTGTTGGCGCATCCGGCACCGGCAGTCAGGAGTTGAGCGTCCGCATTCATGAATTTGGCGGCGGCGTTTCGCAACTGATTGGCACCGGCGGGCGCGACCTGAGCGAGAAAATCGGCGGCCTGATGATGCTCGACGCCATCGGGATGCTGGAAAACGATCCGCAAACTGAAATCATTGCGCTTATCTCCAAACCGCCTGCGCCTGCGGTGGCCCGCAAAGTGCTGGAACGTGCGCGCGCCTGCCGCAAGCCGGTGGTCGTCTGCTTCCTCGATCGTGGCGAAACGCCAGTGGATGAGCAGGGGCTACAGTTTGCCCGCGGCACCAAAGAGGCAGCGCTAAAAGCGGTGATGCTCTCCGGCGTGAAACAGGAAAATCTCGACCTGCATACGCTTAACCAGCCGTTGATTGCGGATGTGCGTGCGCGTCTGCAACCGCAGCAGAAATACATTCGTGGCCTGTTCTGCGGCGGCACGCTGTGCGACGAAACCATGTTCGCGGTGATGGAAAAACATGGCGATGTCTACAGCAACATTCAGCCCGATCCGGAATTCCGCCTGAAAGATATCAACCGCAGCATCAAACACACCTTCCTCGACTTTGGCGATGACGACTTCACCAATGGCAAGCCGCACCCGATGATTGACCCCACCAACCGCATCAGTCGCTTGATCGAAGAGGCGCGCGATCCAGAAGTGGCGGTGATCGTGATGGATTTTGTGCTCGGATTTGGATCGCATGAAGATCCGGTCGGCTCCACCATCGAGACGATCAAAGAAGCGAAAGCGATCGCCGCTGCCGAAGGACGCGAGTTGATCATTCTCGCCTATGTGCTGGGTACCGATCTTGATACGCCATCGTTAGAACAACAAAGCCAGATGCTGCTTGATGCCGGAGTGATTCTGGCGAGCAGCAGCACCAATACCGGATTGCTGGCGCGTGAATTTATCTGCAAAGGGGAGGAAGCCTGA", 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"gene_synonym", + "NP_414857.1" + ], + [ + "gene_synonym", + "ECK0321" + ], + [ + "gene_synonym", + "yahI" + ], + [ + "gene_synonym", + "b0323" + ], + [ + "gene_synonym", + "EcoGene:EG13593" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77624" + ], + [ + "gene_synonym", + "GI:16128308" + ] + ], + "dna_sequence": 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[ + "carbamate kinase-like protein" + ], + "id": "CDS_321", + "location": [ + [ + "NC_000913", + 340165, + "+", + 951 + ] + ], + "md5": "2ceeda6b2ed66a76a1a27a93e9b4f069", + "parent_gene": "", + "protein_md5": "3ed616c14a8b68224a1adb27ce200cdc", + "protein_translation": "MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRRAEIAHKREGLPLTPLANCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSDSQRDELQKANPDWCFVEDAGRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVITTGVEKVCIHFGKPQQQALDRVDIATMTRYMQEGHFPPGSMLPKIIASLTFLEQGGKEVIITTPECLPAALRGETGTHIIKT", + "protein_translation_length": 316, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW0316" + ], + [ + "gene_synonym", + "ASAP:ABE-0001109" + ], + [ + "gene_synonym", + "GeneID:944976" + ], + [ + "gene_synonym", + "yahJ" + ], + [ + "gene_synonym", + "ECK0322" + ], + [ + "gene_synonym", + "b0324" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77554" + ], + [ + "gene_synonym", + "EcoGene:EG13594" + ], + [ + "gene_synonym", + "NP_414858.1" + ], + [ + "gene_synonym", + "GI:16128309" + ] + ], + "dna_sequence": 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"ASAP:ABE-0001113" + ], + [ + "gene_synonym", + "yahK" + ], + [ + "gene_synonym", + "ECK0323" + ], + [ + "gene_synonym", + "GI:16128310" + ], + [ + "gene_synonym", + "b0325" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75691" + ], + [ + "gene_synonym", + "EcoGene:EG13595" + ], + [ + "gene_synonym", + "NP_414859.1" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P75693" + ], + [ + "gene_synonym", + "JW0320" + ], + [ + "gene_synonym", + "GeneID:944968" + ], + [ + "gene_synonym", + "b0328" + ] + ], + "dna_sequence": "ATGATGCAGTTAGTTCACTTATTTATGGATGAAATCACTATGGATCCTTTGCATGCCGTTTACCTGACCGTAGGACTGTTCGTGATTACTTTTTTTAATCCGGGAGCCAATCTCTTTGTGGTAGTACAAACCAGCCTGGCTTCCGGTCGACGCGCAGGGGTGCTGACCGGGCTGGGCGTGGCGCTGGGCGATGCATTTTATTCCGGGTTGGGTTTGTTTGGTCTTGCAACGCTAATTACGCAGTGTGAGGAGATTTTTTCGCTTATCAGAATCGTCGGCGGCGCTTATCTCTTATGGTTTGCGTGGTGCAGCATGCGCCGCCAGTCAACACCGCAAATGAGCACACTACAACAACCGATTAGCGCCCCCTGGTATGTCTTTTTTCGCCGCGGATTAATTACCGATCTCTCTAACCCGCAAACCGTTTTATTTTTTATCAGTATTTTCTCAGTAACATTAAATGCCGAAACACCAACATGGGCACGTTTAATGGCCTGGGCGGGGATTGTGCTCGCATCAATTATCTGGCGAGTTTTTCTTAGTCAGGCGTTTTCTTTGCCCGCTGTGCGTCGTGCTTATGGGCGTATGCAACGCGTTGCCAGTCGGGTTATTGGTGCAATTATTGGTGTATTCGCGCTACGCCTGATTTACGAAGGGGTGACGCAGCGGTGA", + "dna_sequence_length": 672, + "functions": [ + "amino acid exporter for proline, lysine, glutamate, homoserine" + ], + "id": "CDS_326", + 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"gene_synonym", + "acnC" + ], + [ + "gene_synonym", + "b0334" + ], + [ + "gene_synonym", + "yahT" + ], + [ + "gene_synonym", + "ASAP:ABE-0001152" + ], + [ + "gene_synonym", + "GI:16128319" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77243" + ], + [ + "gene_synonym", + "JW0325" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK0334" + ], + [ + "gene_synonym", + "ASAP:ABE-0001161" + ], + [ + "gene_synonym", + "b0337" + ], + [ + "gene_synonym", + "EcoGene:EG11326" + ], + [ + "gene_synonym", + "NP_414871.1" + ], + [ + "gene_synonym", + "GI:16128322" + ] + ], + "dna_sequence": 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}, + { + "aliases": [ + [ + "gene_synonym", + "b0341" + ], + [ + "gene_synonym", + "ECK0338" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17583" + ], + [ + "gene_synonym", + "cynX" + ], + [ + "gene_synonym", + "ASAP:ABE-0001175" + ], + [ + "gene_synonym", + "NP_414875.1" + ], + [ + "gene_synonym", + "GeneID:946770" + ], + [ + "gene_synonym", + "GI:16128326" + ], + [ + "gene_synonym", + "JW0332" + ], + [ + "gene_synonym", + "EcoGene:EG10177" + ] + ], + "dna_sequence": 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"gene_synonym", + "UniProtKB/Swiss-Prot:P07464" + ], + [ + "gene_synonym", + "NP_414876.1" + ], + [ + "gene_synonym", + "JW0333" + ], + [ + "gene_synonym", + "GI:16128327" + ], + [ + "gene_synonym", + "EcoGene:EG10524" + ] + ], + "dna_sequence": "TTGAACATGCCAATGACCGAAAGAATAAGAGCAGGCAAGCTATTTACCGATATGTGCGAAGGCTTACCGGAAAAAAGACTTCGTGGGAAAACGTTAATGTATGAGTTTAATCACTCGCATCCATCAGAAGTTGAAAAAAGAGAAAGCCTGATTAAAGAAATGTTTGCCACGGTAGGGGAAAACGCCTGGGTAGAACCGCCTGTCTATTTCTCTTACGGTTCCAACATCCATATAGGCCGCAATTTTTATGCAAATTTCAATTTAACCATTGTCGATGACTACACGGTAACAATCGGTGATAACGTACTGATTGCACCCAACGTTACTCTTTCCGTTACGGGACACCCTGTACACCATGAATTGAGAAAAAACGGCGAGATGTACTCTTTTCCGATAACGATTGGCAATAACGTCTGGATCGGAAGTCATGTGGTTATTAATCCAGGCGTCACCATCGGGGATAATTCTGTTATTGGCGCGGGTAGTATCGTCACAAAAGACATTCCACCAAACGTCGTGGCGGCTGGCGTTCCTTGTCGGGTTATTCGCGAAATAAACGACCGGGATAAGCACTATTATTTCAAAGATTATAAAGTTGAATCGTCAGTTTAA", + "dna_sequence_length": 612, + "functions": [ + "thiogalactoside acetyltransferase" + ], + "id": "CDS_339", + "location": [ + [ + "NC_000913", + 361860, + "-", + 612 + ] + ], + "md5": "a3cc2cde2e4f55ddfe1d705f49823640", + "parent_gene": "", + "protein_md5": "e69827668fe7dbce00e651f828d1d5c7", + "protein_translation": "MNMPMTERIRAGKLFTDMCEGLPEKRLRGKTLMYEFNHSHPSEVEKRESLIKEMFATVGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREINDRDKHYYFKDYKVESSV", + "protein_translation_length": 203, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:949083" + ], + [ + "gene_synonym", + "NP_414877.1" + ], + [ + "gene_synonym", + "b0343" + ], + [ + "gene_synonym", + "EcoGene:EG10526" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02920" + ], + [ + "gene_synonym", + "GI:16128328" + ], + [ + "gene_synonym", + "lacY" + ], + [ + "gene_synonym", + "ASAP:ABE-0001181" + ], + [ + "gene_synonym", + "JW0334" + ], + [ + "gene_synonym", + "ECK0340" + ] + ], + "dna_sequence": "ATGTACTATTTAAAAAACACAAACTTTTGGATGTTCGGTTTATTCTTTTTCTTTTACTTTTTTATCATGGGAGCCTACTTCCCGTTTTTCCCGATTTGGCTACATGACATCAACCATATCAGCAAAAGTGATACGGGTATTATTTTTGCCGCTATTTCTCTGTTCTCGCTATTATTCCAACCGCTGTTTGGTCTGCTTTCTGACAAACTCGGGCTGCGCAAATACCTGCTGTGGATTATTACCGGCATGTTAGTGATGTTTGCGCCGTTCTTTATTTTTATCTTCGGGCCACTGTTACAATACAACATTTTAGTAGGATCGATTGTTGGTGGTATTTATCTAGGCTTTTGTTTTAACGCCGGTGCGCCAGCAGTAGAGGCATTTATTGAGAAAGTCAGCCGTCGCAGTAATTTCGAATTTGGTCGCGCGCGGATGTTTGGCTGTGTTGGCTGGGCGCTGTGTGCCTCGATTGTCGGCATCATGTTCACCATCAATAATCAGTTTGTTTTCTGGCTGGGCTCTGGCTGTGCACTCATCCTCGCCGTTTTACTCTTTTTCGCCAAAACGGATGCGCCCTCTTCTGCCACGGTTGCCAATGCGGTAGGTGCCAACCATTCGGCATTTAGCCTTAAGCTGGCACTGGAACTGTTCAGACAGCCAAAACTGTGGTTTTTGTCACTGTATGTTATTGGCGTTTCCTGCACCTACGATGTTTTTGACCAACAGTTTGCTAATTTCTTTACTTCGTTCTTTGCTACCGGTGAACAGGGTACGCGGGTATTTGGCTACGTAACGACAATGGGCGAATTACTTAACGCCTCGATTATGTTCTTTGCGCCACTGATCATTAATCGCATCGGTGGGAAAAACGCCCTGCTGCTGGCTGGCACTATTATGTCTGTACGTATTATTGGCTCATCGTTCGCCACCTCAGCGCTGGAAGTGGTTATTCTGAAAACGCTGCATATGTTTGAAGTACCGTTCCTGCTGGTGGGCTGCTTTAAATATATTACCAGCCAGTTTGAAGTGCGTTTTTCAGCGACGATTTATCTGGTCTGTTTCTGCTTCTTTAAGCAACTGGCGATGATTTTTATGTCTGTACTGGCGGGCAATATGTATGAAAGCATCGGTTTCCAGGGCGCTTATCTGGTGCTGGGTCTGGTGGCGCTGGGCTTCACCTTAATTTCCGTGTTCACGCTTAGCGGCCCCGGCCCGCTTTCCCTGCTGCGTCGTCAGGTGAATGAAGTCGCTTAA", 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"gene_synonym", + "GeneID:945006" + ], + [ + "gene_synonym", + "GI:16128329" + ], + [ + "gene_synonym", + "lacZ" + ], + [ + "gene_synonym", + "JW0335" + ], + [ + "gene_synonym", + "ASAP:ABE-0001183" + ], + [ + "gene_synonym", + "ECK0341" + ] + ], + "dna_sequence": "ATGACCATGATTACGGATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCGCTTTGCCTGGTTTCCGGCACCAGAAGCGGTGCCGGAAAGCTGGCTGGAGTGCGATCTTCCTGAGGCCGATACTGTCGTCGTCCCCTCAAACTGGCAGATGCACGGTTACGATGCGCCCATCTACACCAACGTGACCTATCCCATTACGGTCAATCCGCCGTTTGTTCCCACGGAGAATCCGACGGGTTGTTACTCGCTCACATTTAATGTTGATGAAAGCTGGCTACAGGAAGGCCAGACGCGAATTATTTTTGATGGCGTTAACTCGGCGTTTCATCTGTGGTGCAACGGGCGCTGGGTCGGTTACGGCCAGGACAGTCGTTTGCCGTCTGAATTTGACCTGAGCGCATTTTTACGCGCCGGAGAAAACCGCCTCGCGGTGATGGTGCTGCGCTGGAGTGACGGCAGTTATCTGGAAGATCAGGATATGTGGCGGATGAGCGGCATTTTCCGTGACGTCTCGTTGCTGCATAAACCGACTACACAAATCAGCGATTTCCATGTTGCCACTCGCTTTAATGATGATTTCAGCCGCGCTGTACTGGAGGCTGAAGTTCAGATGTGCGGCGAGTTGCGTGACTACCTACGGGTAACAGTTTCTTTATGGCAGGGTGAAACGCAGGTCGCCAGCGGCACCGCGCCTTTCGGCGGTGAAATTATCGATGAGCGTGGTGGTTATGCCGATCGCGTCACACTACGTCTGAACGTCGAAAACCCGAAACTGTGGAGCGCCGAAATCCCGAATCTCTATCGTGCGGTGGTTGAACTGCACACCGCCGACGGCACGCTGATTGAAGCAGAAGCCTGCGATGTCGGTTTCCGCGAGGTGCGGATTGAAAATGGTCTGCTGCTGCTGAACGGCAAGCCGTTGCTGATTCGAGGCGTTAACCGTCACGAGCATCATCCTCTGCATGGTCAGGTCATGGATGAGCAGACGATGGTGCAGGATATCCTGCTGATGAAGCAGAACAACTTTAACGCCGTGCGCTGTTCGCATTATCCGAACCATCCGCTGTGGTACACGCTGTGCGACCGCTACGGCCTGTATGTGGTGGATGAAGCCAATATTGAAACCCACGGCATGGTGCCAATGAATCGTCTGACCGATGATCCGCGCTGGCTACCGGCGATGAGCGAACGCGTAACGCGAATGGTGCAGCGCGATCGTAATCACCCGAGTGTGATCATCTGGTCGCTGGGGAATGAATCAGGCCACGGCGCTAATCACGACGCGCTGTATCGCTGGATCAAATCTGTCGATCCTTCCCGCCCGGTGCAGTATGAAGGCGGCGGAGCCGACACCACGGCCACCGATATTATTTGCCCGATGTACGCGCGCGTGGATGAAGACCAGCCCTTCCCGGCTGTGCCGAAATGGTCCATCAAAAAATGGCTTTCGCTACCTGGAGAGACGCGCCCGCTGATCCTTTGCGAATACGCCCACGCGATGGGTAACAGTCTTGGCGGTTTCGCTAAATACTGGCAGGCGTTTCGTCAGTATCCCCGTTTACAGGGCGGCTTCGTCTGGGACTGGGTGGATCAGTCGCTGATTAAATATGATGAAAACGGCAACCCGTGGTCGGCTTACGGCGGTGATTTTGGCGATACGCCGAACGATCGCCAGTTCTGTATGAACGGTCTGGTCTTTGCCGACCGCACGCCGCATCCAGCGCTGACGGAAGCAAAACACCAGCAGCAGTTTTTCCAGTTCCGTTTATCCGGGCAAACCATCGAAGTGACCAGCGAATACCTGTTCCGTCATAGCGATAACGAGCTCCTGCACTGGATGGTGGCGCTGGATGGTAAGCCGCTGGCAAGCGGTGAAGTGCCTCTGGATGTCGCTCCACAAGGTAAACAGTTGATTGAACTGCCTGAACTACCGCAGCCGGAGAGCGCCGGGCAACTCTGGCTCACAGTACGCGTAGTGCAACCGAACGCGACCGCATGGTCAGAAGCCGGGCACATCAGCGCCTGGCAGCAGTGGCGTCTGGCGGAAAACCTCAGTGTGACGCTCCCCGCCGCGTCCCACGCCATCCCGCATCTGACCACCAGCGAAATGGATTTTTGCATCGAGCTGGGTAATAAGCGTTGGCAATTTAACCGCCAGTCAGGCTTTCTTTCACAGATGTGGATTGGCGATAAAAAACAACTGCTGACGCCGCTGCGCGATCAGTTCACCCGTGCACCGCTGGATAACGACATTGGCGTAAGTGAAGCGACCCGCATTGACCCTAACGCCTGGGTCGAACGCTGGAAGGCGGCGGGCCATTACCAGGCCGAAGCAGCGTTGTTGCAGTGCACGGCAGATACACTTGCTGATGCGGTGCTGATTACGACCGCTCACGCGTGGCAGCATCAGGGGAAAACCTTATTTATCAGCCGGAAAACCTACCGGATTGATGGTAGTGGTCAAATGGCGATTACCGTTGATGTTGAAGTGGCGAGCGATACACCGCATCCGGCGCGGATTGGCCTGAACTGCCAGCTGGCGCAGGTAGCAGAGCGGGTAAACTGGCTCGGATTAGGGCCGCAAGAAAACTATCCCGACCGCCTTACTGCCGCCTGTTTTGACCGCTGGGATCTGCCATTGTCAGACATGTATACCCCGTACGTCTTCCCGAGCGAAAACGGTCTGCGCTGCGGGACGCGCGAATTGAATTATGGCCCACACCAGTGGCGCGGCGACTTCCAGTTCAACATCAGCCGCTACAGTCAACAGCAACTGATGGAAACCAGCCATCGCCATCTGCTGCACGCGGAAGAAGGCACATGGCTGAATATCGACGGTTTCCATATGGGGATTGGTGGCGACGACTCCTGGAGCCCGTCAGTATCGGCGGAATTCCAGCTGAGCGCCGGTCGCTACCATTACCAGTTGGTCTGGTGTCAAAAATAA", 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"MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK", + "protein_translation_length": 1024, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b0345" + ], + [ + "gene_synonym", + "NP_414879.3" + ], + [ + "gene_synonym", + "lacI" + ], + [ + "gene_synonym", + "EcoGene:EG10525" + ], + [ + "gene_synonym", + "GeneID:945007" + ], + [ + "gene_synonym", + "ASAP:ABE-0001189" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03023" + ], + [ + "gene_synonym", + "JW0336" + ], + [ + "gene_synonym", + "ECK0342" + ], + [ + "gene_synonym", + "GI:49176012" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG20276" + ], + [ + "gene_synonym", + "NP_414880.2" + ], + [ + "gene_synonym", + "ECK0343" + ], + [ + "gene_synonym", + "JW0337" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77569" + ] + ], + "dna_sequence": 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"-", + 834 + ] + ], + "md5": "784ae742cb0f575be5bd3c22673458b5", + "parent_gene": "", + "protein_md5": "62040962c3fe17fc1c7f7539ddf2f4d3", + "protein_translation": "MQNNEQTEYKTVRGLTRGLMLLNMLNKLDGGASVGLLAELSGLHRTTVRRLLETLQEEGYVRRSPSDDSFRLTIKVRQLSEGFRDEQWISALAAPLLGDLLREVVWPTDVSTLDVDAMVVRETTHRFSRLSFHRAMVGRRLPLLKTASGLTWLAFCPEQDRKELIEMLASRPGDDYQLAREPLKLEAILARARKEGYGQNYRGWDQEEKIASIAVPLRSEQRVIGCLNLVYMASAMTIEQAAEKHLPALQRVAKQIEEGVESQAILVAGRRSGMHLR", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77397" + ], + [ + "gene_synonym", + "NP_414881.1" + ], + [ + "gene_synonym", + "b0347" + ], + [ + "gene_synonym", + "ASAP:ABE-0001196" + ], + [ + "gene_synonym", + "GeneID:945197" + ], + [ + "gene_synonym", + "JW0338" + ], + [ + "gene_synonym", + "mhpA" + ], + [ + "gene_synonym", + "EcoGene:EG20273" + ], + [ + "gene_synonym", + "ECK0344" + ], + [ + "gene_synonym", + "GI:16128332" + ] + ], + "dna_sequence": 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"2,3-dihydroxyphenylpropionate 1,2-dioxygenase" + ], + "id": "CDS_345", + "location": [ + [ + "NC_000913", + 370277, + "+", + 945 + ] + ], + "md5": "f4870f2d857cf429362d1d8c4fe37bca", + "parent_gene": "", + "protein_md5": "2932d3b4e9fdac8bc4bfe81ba6c920bd", + "protein_translation": "MHAYLHCLSHSPLVGYVDPAQEVLDEVNGVIASARERIAAFSPELVVLFAPDHYNGFFYDVMPPFCLGVGATAIGDFGSAAGELPVPVELAEACAHAVMKSGIDLAVSYCMQVDHGFAQPLEFLLGGLDKVPVLPVFINGVATPLPGFQRTRMLGEAIGRFTSTLNKRVLFLGSGGLSHQPPVPELAKADAHMRDRLLGSGKDLPASERELRQQRVISAAEKFVEDQRTLHPLNPIWDNQFMTLLEQGRIQELDAVSNEELSAIAGKSTHEIKTWVAAFAAISAFGNWRSEGRYYRPIPEWIAGFGSLSARTEN", + "protein_translation_length": 314, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW0340" + ], + [ + "gene_synonym", + "GI:459201369" + ], + [ + "gene_synonym", + "b0349" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77044" + ], + [ + "gene_synonym", + "mhpC" + ], + [ + "gene_synonym", + "GeneID:944954" + ], + [ + "gene_synonym", + "NP_414883.5" + ], + [ + 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"gene_synonym", + "UniProtKB/Swiss-Prot:P77608" + ] + ], + "dna_sequence": "ATGACGAAGCATACTCTTGAGCAACTGGCGGCGGATTTACGCCGCGCCGCAGAGCAGGGCGAAGCGATTGCACCGCTGCGCGATCTGATTGGTATCGATAACGCTGAAGCGGCTTACGCCATTCAGCACATAAATGTGCAACATGACGTTGCGCAGGGGCGTCGCGTGGTAGGGCGTAAAGTGGGCCTGACACATCCGAAAGTGCAACAACAACTGGGCGTTGATCAACCGGATTTTGGGACGTTATTTGCCGACATGTGTTATGGCGATAACGAAATCATTCCTTTTTCCCGTGTTCTGCAACCCCGCATTGAAGCGGAGATCGCACTGGTGTTGAACCGCGATTTGCCCGCAACCGATATCACCTTCGACGAATTGTATAACGCCATTGAATGGGTACTTCCGGCGCTGGAAGTGGTGGGGAGCCGCATTCGCGACTGGTCGATTCAGTTTGTCGATACCGTGGCAGATAACGCCTCCTGTGGGGTGTATGTCATCGGCGGTCCGGCGCAACGTCCGGCGGGGTTAGACCTGAAAAACTGCGCCATGAAGATGACGCGTAATAACGAAGAGGTTTCTAGCGGGCGCGGCAGCGAATGCCTGGGACATCCGCTTAATGCGGCCGTCTGGCTGGCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGA", + "dna_sequence_length": 810, + "functions": [ + "2-keto-4-pentenoate hydratase" + ], + "id": "CDS_347", + "location": [ + [ + "NC_000913", + 372115, + "+", + 810 + ] + ], + "md5": "4521c523ab1522dae841ce7daf0c7e0a", + "parent_gene": "", + "protein_md5": "da10eaa6e06640558dea3773f0f7dd3c", + "protein_translation": "MTKHTLEQLAADLRRAAEQGEAIAPLRDLIGIDNAEAAYAIQHINVQHDVAQGRRVVGRKVGLTHPKVQQQLGVDQPDFGTLFADMCYGDNEIIPFSRVLQPRIEAEIALVLNRDLPATDITFDELYNAIEWVLPALEVVGSRIRDWSIQFVDTVADNASCGVYVIGGPAQRPAGLDLKNCAMKMTRNNEEVSSGRGSECLGHPLNAAVWLARKMASLGEPLRTGDIILTGALGPMVAVNAGDRFEAHIEGIGSVAATFSSAAPKGSLS", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG13625" + ], + [ + "gene_synonym", + "NP_414885.1" + ], + [ + "gene_synonym", + "b0351" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77580" + ], + [ + "gene_synonym", + "JW0342" + ], + [ + "gene_synonym", + "mhpF" + ], + [ + "gene_synonym", + "ECK0348" + ], + [ + "gene_synonym", + "GI:16128336" + ], + [ + "gene_synonym", + "ASAP:ABE-0001207" + ], + [ + "gene_synonym", + "GeneID:945008" + ] + ], + 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"ECK0349" + ], + [ + "gene_synonym", + "GI:16128337" + ], + [ + "gene_synonym", + "EcoGene:EG13292" + ], + [ + "gene_synonym", + "b0352" + ] + ], + "dna_sequence": 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"NP_414887.2" + ], + [ + "gene_synonym", + "EcoGene:EG13293" + ], + [ + "gene_synonym", + "ASAP:ABE-0001213" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77589" + ], + [ + "gene_synonym", + "ECK0350" + ], + [ + "gene_synonym", + "JW5046" + ] + ], + "dna_sequence": 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"MHSWKKKLVVSQLALACTLAITSQANAANYDTWTYIDNPVTALDWDHMDKAGTVDGNYVNYSGFVYYNNTNGDFDQSFNGDTVNGTISTYYLNHDYADSTANQLDISNSVIHGSITSMLPGGYYDRFDADGNNLGGYDFYTDAVVDTHWRDGDVFTLNIANTTIDDDYEALYFTDSYKDGDVTKHTNETFDTSEGVAVNLDVESNINISNNSRVAGIALSQGNTYNETYTTESHTWDNNISVKDSTVTSGSNYILDSNTYGKTGHFGNSDEPSDYAGPGDVAMSFTASGSDYAMKNNVFLSNSTLMGDVAFTSTWNSNFDPNGHDSNGDGVKDTNGGWTDDSLNVDELNLTLDNGSKWVGQAIYNVAETSAMYDVATNSLTPDATYENNDWKRVVDDKVFQSGVFNVALNNGSEWDTTGRSIVDTLTVNNGSQVNVSESKLTSDTIDLTNGSSLNIGEDGYVDTDHLTINSYSTVALTESTGWGADYNLYANTITVTNGGVLDVNVDQFDTEAFRTDKLELTSGNIADHNGNVVSGVFDIHSSDYVLNADLVNDRTWDTSKSNYGYGIVAMNSDGHLTINGNGDVDNGTELDNSSVDNVVAATGNYKVRIDNATGAGAIADYKDKEIIYVNDVNSNATFSAANKADLGAYTYQAEQRGNTVVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYVTPYGSVSGLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNNDNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWSANVGVKYTW", + "protein_translation_length": 968, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16128357" + ], + [ + "gene_synonym", + "NP_414906.1" + ], + [ + "gene_synonym", + "GeneID:945036" + ], + [ + "gene_synonym", + "EcoGene:EG40006" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF80" + ], + [ + "gene_synonym", + "ASAP:ABE-0001277" + ], + [ + "gene_synonym", + "insF1" + ], + [ + "gene_synonym", + "b0372" + ], + [ + "gene_synonym", + "ECK0299" + ] + ], + "dna_sequence": 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392605, + "-", + 867 + ] + ], + "md5": "f16497ced719778b623ae488d3ff6549", + "parent_gene": "", + "protein_md5": "d747daab607a7e429605aaffca2556f8", + "protein_translation": "MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001279" + ], + [ + "gene_synonym", + "NP_414907.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF67" + ], + [ + "gene_synonym", + "EcoGene:EG40005" + ], + [ + "gene_synonym", + "GeneID:946900" + ], + [ + "gene_synonym", + "insE1" + ], + [ + "gene_synonym", + "b0373" + ], + [ + "gene_synonym", + "GI:226524701" + ], + [ + "gene_synonym", + "ECK0298" + ] + ], + "dna_sequence": "ATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA", + "dna_sequence_length": 300, + "functions": [ + "IS3 transposase A" + ], + "id": "CDS_368", + "location": [ + [ + "NC_000913", + 392901, + "-", + 300 + ] + ], + "md5": "2b8299a430402ee6e8586f7af8039b36", + "parent_gene": "", + "protein_md5": "03ddb941ec5f7556890ce78365da94d2", + "protein_translation": "MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK", + "protein_translation_length": 99, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001290" + ], + [ + "gene_synonym", + "NP_414909.2" + ], + [ + "gene_synonym", + "ECK0370" + ], + [ + "gene_synonym", + "EcoGene:EG13607" + ], + [ + "gene_synonym", + "JW0366" + ], + [ + "gene_synonym", + "GeneID:946902" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAP5" + ], + [ + "gene_synonym", + "yaiV" + ], + [ + "gene_synonym", + "GI:226524702" + ], + [ + "gene_synonym", + "b0375" + ] + ], + "dna_sequence": "ATGTTATCTGTAGTTAAACCTCTTCAGGAATTTGGTAAGCTCGATAAATGTTTGTCCAGATACGGTACGCGCTTCGAGTTTAATAATGAAAAGCAAGTTATATTTTCCAGTGATGTCAATAACGAAGATACTTTCGTTATTTTAGAGGGAGTTATCTCTCTGCGTAGAGAAGAAAACGTACTTATCGGTATTACCCAGGCTCCTTATATTATGGGGCTGGCTGATGGTTTAATGAAAAACGATATACCATACAAATTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGGCAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGTGTGATGAATTATATCCATCAACGTACACGCATATCGCGTTCTGTCGTCGCAGAAGTTCTCGCTGCTTTGCGTAAAGGCGGCTATATCGAAATGAATAAAGGCAAACTGGTCGCTATCAACCGTTTGCCTTCAGAGTATTAA", + "dna_sequence_length": 624, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_369", + "location": [ 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"gene_synonym", + "GeneID:946884" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFY6" + ], + [ + "gene_synonym", + "EcoGene:EG10928" + ], + [ + "gene_synonym", + "sbmA" + ], + [ + "gene_synonym", + "b0377" + ], + [ + "gene_synonym", + "NP_414911.1" + ], + [ + "gene_synonym", + "JW0368" + ] + ], + "dna_sequence": "ATGTTTAAGTCTTTTTTCCCAAAGCCGGGAACGTTTTTTCTCTCGGCCTTCGTTTGGGCATTGATTGCCGTTATCTTCTGGCAAGCCGGTGGGGGTGACTGGGTGGCGCGTATCACCGGCGCTTCCGGGCAGATCCCGATTAGCGCCGCGCGTTTCTGGTCGTTGGATTTCCTGATTTTTTACGCTTACTACATTGTTTGCGTAGGACTTTTTGCATTGTTCTGGTTTATCTACAGCCCGCATCGTTGGCAATACTGGTCAATACTCGGTACTGCACTGATCATCTTCGTCACCTGGTTTTTGGTGGAAGTCGGGGTCGCCGTCAACGCCTGGTATGCGCCGTTCTATGATCTGATTCAAACCGCGCTAAGTTCGCCGCATAAAGTCACCATCGAACAATTTTACCGCGAAGTGGGCGTCTTTCTGGGGATTGCGCTGATCGCTGTGGTGATCAGTGTGCTGAACAACTTCTTTGTCAGTCACTACGTGTTCCGCTGGCGTACAGCGATGAACGAATATTACATGGCGAACTGGCAACAACTGCGTCATATCGAAGGGGCCGCACAGCGTGTGCAGGAAGACACCATGCGTTTTGCTTCAACGCTGGAGAATATGGGCGTCAGTTTTATCAACGCCATCATGACGTTGATCGCCTTCCTGCCGGTGCTGGTAACGCTCTCCGCGCATGTGCCGGAGCTGCCGATTATCGGGCACATTCCGTATGGTCTGGTGATTGCCGCAATCGTCTGGTCGCTGATGGGGACCGGATTGCTGGCAGTGGTAGGGATCAAACTGCCGGGGCTGGAGTTTAAAAACCAGCGTGTAGAGGCTGCCTACCGTAAAGAGCTGGTTTATGGTGAAGACGATGCCACGCGCGCGACGCCGCCTACGGTACGCGAGCTGTTTAGCGCCGTACGGAAAAACTATTTCCGCCTCTATTTTCACTATATGTATTTCAACATCGCCCGCATTCTCTATTTGCAGGTCGATAACGTTTTCGGTTTGTTCTTGCTGTTTCCGTCAATTGTTGCCGGTACGATTACGCTCGGCCTGATGACGCAGATTACCAACGTTTTTGGTCAGGTTCGCGGTGCTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAA", 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[ + "gene_synonym", + "ECK0398" + ], + [ + "gene_synonym", + "b0404" + ], + [ + "gene_synonym", + "NP_414938.1" + ], + [ + "gene_synonym", + "GI:16128389" + ], + [ + "gene_synonym", + "GeneID:949132" + ], + [ + "gene_synonym", + "ASAP:ABE-0001404" + ], + [ + "gene_synonym", + "acpD" + ], + [ + "gene_synonym", + "yajB" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21515" + ], + [ + "gene_synonym", + "acpH" + ], + [ + "gene_synonym", + "EcoGene:EG11095" + ], + [ + "gene_synonym", + "JW0394" + ] + ], + "dna_sequence": "ATGAATTTTTTAGCTCACCTGCATTTAGCCCATCTCGCGGAAAGCTCGCTTTCCGGCAATTTACTGGCTGATTTCGTACGCGGAAATCCTGAAGAAAGTTTTCCGCCCGACGTCGTGGCTGGCATTCATATGCATCGACGTATCGACGTATTGACTGACAATCTGCCGGAAGTCCGCGAAGCACGGGAGTGGTTTCGTAGTGAAACGCGCCGCGTTGCGCCTATTACGCTGGATGTCATGTGGGATCACTTTCTTTCCCGCCACTGGTCGCAGCTGTCGCCGGACTTTCCGCTACAGGAATTTGTCTGTTATGCCCGCGAGCAAGTGATGACGATTTTGCCGGACTCACCGCCACGTTTTATCAATCTGAACAATTACTTGTGGTCAGAGCAGTGGCTGGTGCGCTATCGCGATATGGATTTCATCCAGAACGTGTTAAACGGCATGGCAAGCCGCCGCCCACGTCTGGATGCCCTGCGTGACTCCTGGTACGATTTAGACGCTCATTATGACGCCCTCGAAACCCGCTTCTGGCAGTTTTATCCGCGGATGATGGCGCAGGCGTCACGCAAGGCGTTATAA", + "dna_sequence_length": 582, + "functions": [ + "acyl carrier protein (ACP) phosphodiesterase", + "ACP hydrolyase" + ], + "id": "CDS_397", + "location": [ + [ + "NC_000913", + 424918, + "-", + 582 + ] + ], + "md5": "9ffb26c06aec2303706433d8188cfe6f", + "parent_gene": "", + "protein_md5": "2502d6cf4bbc03565b0eae18159ac0f1", + "protein_translation": "MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHMHRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFVCYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQFYPRMMAQASRKAL", + "protein_translation_length": 193, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "queA" + ], + [ + "gene_synonym", + "ECK0399" + ], + [ + "gene_synonym", + "b0405" + ], + [ + "gene_synonym", + "EcoGene:EG10812" + ], + [ + "gene_synonym", + "GI:16128390" + ], + [ + "gene_synonym", + "GeneID:944905" + ], + [ + "gene_synonym", + "NP_414939.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7F9" + ], + [ + "gene_synonym", + "ASAP:ABE-0001411" + ], + [ + "gene_synonym", + "JW0395" + ] + ], + "dna_sequence": "ATGCGCGTTACCGATTTCTCCTTTGAATTGCCCGAATCCCTGATTGCCCACTATCCCATGCCTGAACGCAGTAGCTGTCGTTTACTGTCGCTGGACGGGCCGACGGGCGCGCTGACGCACGGTACTTTCACCGATTTACTTGATAAGCTCAACCCCGGCGATCTTCTGGTTTTTAATAATACCCGCGTGATCCCGGCGCGCCTGTTTGGGCGTAAAGCCAGCGGCGGCAAGATTGAAGTGCTGGTTGAACGGATGCTCGACGACAAACGCATTCTTGCGCATATTCGCGCCTCGAAAGCGCCAAAACCTGGCGCAGAACTGCTGCTGGGCGATGACGAAAGTATTAACGCAACAATGACCGCGCGCCACGGCGCACTGTTTGAAGTCGAATTTAATGATGAACGCTCGGTGCTGGATATTCTCAACAGCATCGGCCATATGCCGCTGCCGCCGTATATCGACCGTCCGGACGAAGACGCTGACCGCGAACTTTATCAAACCGTTTATAGCGAAAAACCGGGCGCGGTTGCAGCCCCGACCGCAGGTCTGCATTTTGACGAGCCTTTGCTGGAAAAATTGCGCGCCAAAGGCGTGGAGATGGCGTTTGTGACGTTGCACGTTGGTGCGGGCACCTTCCAGCCGGTGCGCGTCGACACCATTGAAGATCACATCATGCACTCGGAATACGCTGAAGTACCGCAGGATGTGGTAGACGCGGTACTGGCGGCGAAAGCGCGCGGTAACCGGGTGATTGCGGTTGGCACCACTTCAGTACGTTCGCTGGAAAGCGCGGCTCAGGCAGCGAAAAACGATCTCATTGAACCGTTCTTCGACGATACCCAAATCTTTATCTATCCGGGCTTCCAGTACAAAGTGGTCGATGCGCTGGTGACGAACTTCCACTTGCCAGAGTCGACGCTGATTATGCTGGTTTCGGCCTTTGCCGGTTATCAACACACCATGAACGCCTATAAAGCAGCGGTAGAAGAGAAATATCGCTTTTTTAGTTACGGTGATGCGATGTTTATCACGTACAATCCGCAGGCAATTAATGAGCGCGTCGGGGAGTAA", 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"gene_synonym", + "EcoGene:EG10996" + ], + [ + "gene_synonym", + "NP_414940.1" + ], + [ + "gene_synonym", + "vacC" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A847" + ], + [ + "gene_synonym", + "ECK0400" + ], + [ + "gene_synonym", + "JW0396" + ] + ], + "dna_sequence": "ATGAAATTTGAACTGGACACCACCGACGGTCGCGCACGCCGTGGCCGCCTGGTCTTTGATCGTGGCGTAGTGGAAACGCCTTGTTTTATGCCTGTTGGCACCTACGGCACCGTAAAAGGGATGACGCCGGAAGAAGTTGAAGCCACTGGCGCGCAAATTATCCTCGGCAACACCTTCCACCTGTGGCTGCGCCCGGGCCAGGAAATCATGAAACTGCACGGCGATCTGCACGATTTTATGCAGTGGAAGGGGCCGATCCTCACCGACTCCGGCGGCTTCCAGGTCTTCAGCCTTGGCGATATTCGTAAAATCACCGAACAGGGCGTGCACTTCCGTAACCCGATCAACGGCGATCCGATTTTCCTCGATCCTGAAAAATCAATGGAGATTCAGTACGATCTTGGTTCGGATATCGTCATGATCTTTGATGAGTGTACGCCGTATCCTGCTGACTGGGATTACGCAAAACGCTCCATGGAGATGTCTCTGCGTTGGGCGAAGCGTAGCCGTGAGCGTTTTGACAGTCTCGGAAACAAAAATGCGCTGTTTGGTATCATCCAGGGCAGCGTTTACGAAGATTTACGTGATATTTCTGTTAAAGGTCTGGTAGATATCGGTTTTGATGGCTACGCTGTCGGCGGTCTGGCTGTGGGTGAGCCGAAAGCAGATATGCACCGCATTCTGGAGCATGTATGCCCGCAAATTCCGGCAGACAAACCGCGTTACCTGATGGGCGTTGGTAAACCAGAAGACCTGGTTGAAGGCGTACGTCGTGGTATCGATATGTTTGACTGCGTAATGCCAACCCGCAACGCCCGAAATGGTCATTTGTTCGTGACCGATGGCGTGGTGAAAATCCGCAATGCGAAGTATAAGAGCGATACTGGCCCACTCGATCCTGAGTGTGATTGCTACACCTGTCGCAATTATTCACGCGCTTACTTGCATCATCTTGACCGTTGCAACGAAATATTAGGCGCGCGACTCAACACCATTCATAACCTTCGTTACTACCAGCGTTTGATGGCGGGTTTACGCAAGGCTATTGAAGAGGGTAAATTAGAGAGCTTCGTAACTGATTTTTACCAGCGTCAGGGGCGAGAAGTACCACCTTTGAACGTTGATTAA", 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], + [ + "gene_synonym", + "GeneID:945374" + ], + [ + "gene_synonym", + "yajC" + ], + [ + "gene_synonym", + "JW0397" + ], + [ + "gene_synonym", + "ECK0401" + ], + [ + "gene_synonym", + "EcoGene:EG11096" + ] + ], + "dna_sequence": "ATGAGCTTTTTTATTTCTGATGCGGTAGCGGCAACGGGTGCACCGGCGCAAGGTAGCCCGATGTCTTTGATTTTGATGCTGGTGGTATTCGGTCTGATTTTCTATTTCATGATCCTGCGTCCACAGCAGAAGCGCACCAAAGAACACAAAAAGCTGATGGACTCCATTGCCAAAGGTGATGAAGTTCTGACGAACGGTGGCCTGGTTGGTCGCGTAACCAAAGTAGCGGAAAACGGCTACATTGCTATCGCGCTGAATGACACCACTGAAGTAGTTATTAAACGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAA", + "dna_sequence_length": 333, + "functions": [ + "SecYEG protein translocase auxillary subunit" + ], + "id": "CDS_400", + "location": [ + [ + "NC_000913", + 427287, + "+", + 333 + ] + ], + "md5": "8b7db9fae8a95adbfa0a64ca402e7a5b", + "parent_gene": "", + "protein_md5": "71affcd52404a53dba2f3b6f1bfef285", + "protein_translation": "MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b0408" + ], + [ + "gene_synonym", + "EcoGene:EG10938" + ], + [ + "gene_synonym", + "secD" + ], + [ + "gene_synonym", + "GI:16128393" + ], + [ + "gene_synonym", + "NP_414942.1" + ], + [ + "gene_synonym", + "GeneID:949133" + ], + [ + "gene_synonym", + "ASAP:ABE-0001417" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG90" + ], + [ + "gene_synonym", + "JW0398" + ], + [ + "gene_synonym", + "ECK0402" + ] + ], + "dna_sequence": "GTGTTAAACCGTTATCCTTTGTGGAAGTACGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACTGCTAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACTCCACTGACACCCAGTTGCGCGCTCGTGAAGCATTAATGGGCGTTATGGGTGACAAATACGTCGTGGCGCTTAACCTTGCCCCGGCAACGCCGCGCTGGCTGGCAGCTATTCACGCTGAGCCGATGAAGCTCGGCCTTGACCTGCGTGGCGGCGTTCACTTCCTGATGGAAGTGGATATGGACACCGCGCTTGGCAAACTCCAGGAACAAAATATCGATAGCCTACGCAGTGACCTGCGCGAAAAGGGCATCCCGTATACCACTGTTCGTAAAGAAAACAACTACGGCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATTAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTAATATCCTGCGTAACCGTGTAAACCAACTTGGCGTGGCGGAGCCGGTGGTTCAGCGTCAGGGTGCTGACCGTATCGTTGTTGAACTGCCAGGTATTCAGGACACTGCGCGTGCGAAAGAGATTCTGGGTGCGACGGCAACGCTGGAATTCCGTCTGGTAAACACCAACGTTGACCAGGCCGCTGCGGCATCCGGTCGCGTACCGGGCGACTCTGAAGTGAAACAGACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATCTCGCTCGATAGCGCTGGTGGTAACATCATGTCTAACTTCACTAAGGACAACATCGGCAAACCGATGGCAACCCTGTTTGTGGAGTACAAAGACAGCGGTAAGAAAGATGCAAATGGTCGTGCGGTTCTGGTGAAACAGGAAGAGGTGATTAACATCGCCAACATCCAGTCTCGTCTGGGTAACAGCTTCCGTATCACCGGCATCAACAACCCGAACGAAGCCCGTCAGCTGTCACTGCTGCTGCGTGCCGGTGCGTTGATCGCGCCGATTCAGATTGTTGAAGAACGTACCATTGGCCCAACCCTGGGTATGCAGAACATTGAACAGGGGCTGGAGGCTTGCCTTGCCGGTCTGCTGGTTTCTATTCTGTTCATGATCATCTTCTATAAGAAGTTTGGTCTGATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTATGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAAGAGTTGAGCAACGGACGTACTGTTCAACAGGCAATTGATGAAGGTTATCGTGGCGCATTCAGTTCTATCTTCGATGCGAACATCACCACGCTGATTAAAGTCATCATCCTGTACGCAGTGGGTACCGGGGCAATTAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGA", 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"gene_synonym", + "UniProtKB/Swiss-Prot:P46122" + ] + ], + "dna_sequence": "ATGAATACTAACGTTTTTCGACTGCTCCTGCTGGGAAGCCTGTTCAGCCTTAGCGCCTGTGTGCAGCAAAGTGAAGTGCGACAGATGAAACACAGCGTCAGCACGCTGAACCAGGAGATGACGCAACTCAATCAAGAAACAGTCAAAATCACTCAGCAAAACAGGCTGAATGCAAAATCCAGCAGTGGGGTTTACCTTCTGCCTGGAGCGAAAACACCGGCAAGACTGGAAAGCCAGATCGGTACTTTACGTATGTCGCTGGTGAATATTACGCCTGATGCAGATGGCACCACCCTTACACTACGTATTCAGGGTGAGTCGAATGATCCCTTGCCCGCATTCAGCGGAACTGTTGAATATGGGCAAATTCAGGGAACAATAGACAACTTTCAGGAAATCAATGTGCAGAATCAATTGATTAATGCCCCTGCCAGCGTCCTCGCCCCCAGCGATGTTGATATTCCGTTACAGTTAAAGGGGATTTCTGTGGATCAGTTAGGCTTTGTACGTATCCACGACATTCAACCTGTTATGCAGTAA", + "dna_sequence_length": 540, + "functions": [ + "putative lipoprotein" + ], + "id": "CDS_405", + "location": [ + [ + "NC_000913", + 432851, + "-", + 540 + ] + ], + "md5": "3c0f53a20c0c955989f6447fcf55e535", + "parent_gene": "", + "protein_md5": "f85fab297748e29ce7fcec9f4e5e81c4", + "protein_translation": 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], + [ + "gene_synonym", + "GI:16128425" + ], + [ + "gene_synonym", + "EcoGene:EG10467" + ], + [ + "gene_synonym", + "JW0430" + ], + [ + "gene_synonym", + "dpeA" + ], + [ + "gene_synonym", + "b0440" + ], + [ + "gene_synonym", + "GeneID:949095" + ], + [ + "gene_synonym", + "ASAP:ABE-0001527" + ], + [ + "gene_synonym", + "ECK0434" + ], + [ + "gene_synonym", + "hopD" + ] + ], + "dna_sequence": "GTGAATAAATCTCAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCAACCCGCAGACCGGTAAAGAGATCACCATCGCTGCTGCTAAAGTACCGAGCTTCCGTGCAGGTAAAGCACTGAAAGACGCGGTAAACTAA", + "dna_sequence_length": 273, + "functions": [ + "HU, DNA-binding transcriptional regulator, beta subunit" + ], + "id": "CDS_433", + "location": [ + [ + "NC_000913", + 461451, + "+", + 273 + ] + ], + "md5": "07f961da3806a711015aa00a7d9b723a", + "parent_gene": "", + "protein_md5": "f008373a488a46c105e95fdfb99fa95a", + "protein_translation": "MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:946056" + ], + [ + "gene_synonym", + "EcoGene:EG13249" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADY1" + ], + [ + "gene_synonym", + "GI:16128426" + ], + [ + "gene_synonym", + "JW0431" + ], + [ + "gene_synonym", + "NP_414975.1" + ], + [ + "gene_synonym", + "b0441" + ], + [ + "gene_synonym", + "ppiD" + ], + [ + "gene_synonym", + "ECK0435" + ], + [ + "gene_synonym", + "ASAP:ABE-0001531" + ], + [ + "gene_synonym", + "ybaU" + ] + ], + "dna_sequence": 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"modulator of gene expression, with H-NS" + ], + "id": "CDS_452", + "location": [ + [ + "NC_000913", + 480308, + "-", + 219 + ] + ], + "md5": "8fe3797e6376aaf4864bc2420225414a", + "parent_gene": "", + "protein_md5": "12c7241ea3ff19fca3246f734db77c39", + "protein_translation": "MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ybaJ" + ], + [ + "gene_synonym", + "EcoGene:EG12429" + ], + [ + "gene_synonym", + "ECK0455" + ], + [ + "gene_synonym", + "b0461" + ], + [ + "gene_synonym", + "NP_414994.1" + ], + [ + "gene_synonym", + "JW0450" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAR0" + ], + [ + "gene_synonym", + "GI:16128445" + ], + [ + "gene_synonym", + "tomB" + ], + [ + "gene_synonym", + "ASAP:ABE-0001596" + ], + [ + "gene_synonym", + "GeneID:945106" + ] + ], + "dna_sequence": 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"gene_synonym", + "b0464" + ], + [ + "gene_synonym", + "EcoGene:EG12116" + ], + [ + "gene_synonym", + "GeneID:945516" + ], + [ + "gene_synonym", + "ASAP:ABE-0001608" + ], + [ + "gene_synonym", + "GI:16128448" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACS9" + ] + ], + "dna_sequence": "ATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGGTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACGGTGACAGAAGAACGGCGTCGATTATTGATGGAGATTATATTCCACAAATGCGAATTTGTCGGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGAACAAACGTTAAAACATTGTATTGAAGCGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGCCCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAA", + "dna_sequence_length": 648, + "functions": [ + "transcriptional repressor" + ], + "id": "CDS_456", + "location": [ + [ + "NC_000913", + 485761, + "+", + 648 + ] + ], + "md5": "4830743b562913d95b50c732748e8939", + "parent_gene": "", + "protein_md5": "27e8f13d77a01af2c9129bf6c6703e9a", + "protein_translation": "MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVTRGAIYWHFKDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVTEERRRLLMEIIFHKCEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMTRRAAIIMRGYISGLMENWLFAPQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "pnuH" + ], + [ + "gene_synonym", + "JW0454" + ], + [ + "gene_synonym", + "ECK0459" + ], + [ + "gene_synonym", + "b0465" + ], + [ + "gene_synonym", + "NP_414998.1" + ], + [ + "gene_synonym", + "mscK" + ], + [ + "gene_synonym", + "GI:16128449" + ], + [ + "gene_synonym", + "ASAP:ABE-0001613" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77338" + ], + [ + "gene_synonym", + "aefA" + ], + [ + "gene_synonym", + 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phosphoribosyltransferase" + ], + "id": "CDS_461", + "location": [ + [ + "NC_000913", + 491412, + "+", + 552 + ] + ], + "md5": "a0589fa4b57eeb8c24aeb5805d3881f7", + "parent_gene": "", + "protein_md5": "6d41a83e06643bdacab599c5dd5ed77c", + "protein_translation": "MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSYSLVPFPGH", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_415003.1" + ], + [ + "gene_synonym", + "JW0459" + ], + [ + "gene_synonym", + "GeneID:945105" + ], + [ + "gene_synonym", + "dnaX" + ], + [ + "gene_synonym", + "b0470" + ], + [ + "gene_synonym", + "dnaZ" + ], + [ + "gene_synonym", + "ECK0464" + ], + [ + "gene_synonym", + "ASAP:ABE-0001633" + ], + [ + "gene_synonym", + "EcoGene:EG10245" + ], + [ + "gene_synonym", + "GI:16128454" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06710" + ] + ], 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"Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase" + ], + "id": "CDS_473", + "location": [ + [ + "NC_000913", + 507082, + "-", + 480 + ] + ], + "md5": "7ffa4368e5e124fa45288c7cc9a3fa74", + "parent_gene": "", + "protein_md5": "677dcd5545f1f8a54d803b6efc570355", + "protein_translation": "MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQVYKTLLVAVNGDMKHLAVAVTPVAGQLDLKKVAKALGAKKVEMADPMVAQRSTGYLVGGISPLGQKKRLPTIIDAPAQEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:945124" + ], + [ + "gene_synonym", + "EcoGene:EG13244" + ], + [ + "gene_synonym", + "NP_415015.1" + ], + [ + "gene_synonym", + "ECK0476" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77301" + ], + [ + "gene_synonym", + "JW0471" + ], + [ + "gene_synonym", + "b0482" + ], + [ + "gene_synonym", + "ybaP" + ], + [ + "gene_synonym", + "GI:16128466" + ], + [ + "gene_synonym", + "ASAP:ABE-0001673" + ] + ], + "dna_sequence": 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"protein_translation": "MMNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMSASAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVPLLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS", + "protein_translation_length": 208, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b0495" + ], + [ + "gene_synonym", + "GeneID:945122" + ], + [ + "gene_synonym", + "JW0484" + ], + [ + "gene_synonym", + "EcoGene:EG11657" + ], + [ + "gene_synonym", + "NP_415028.1" + ], + [ + "gene_synonym", + "ybbA" + ], + [ + "gene_synonym", + "ECK0489" + ], + [ + "gene_synonym", + "GI:16128479" + ], + [ + "gene_synonym", + "ASAP:ABE-0001717" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9T8" + ] + ], + "dna_sequence": "ATGCCAGCGGAAAACATTGTTGAAGTTCATCATCTTAAGAAGTCCGTCGGTCAGGGGGAGCATGAACTCTCCATCCTCACCGGAGTTGAGCTGGTTGTCAAACGTGGCGAGACCATCGCACTGGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTACCCTTAACGCGCTGGAAAACGTCGAGCTTCCGGCTCTGCTGCGCGGTGAGAGTAGCGCGGAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGCTGGGTAAACGTCTGGATCATCTTCCGGCACAGCTTTCCGGCGGTGAACAGCAACGAGTGGCGCTGGCACGAGCCTTTAATGGTCGACCTGATGTGCTGTTTGCCGACGAACCCACCGGCAACCTTGACCGCCAGACGGGCGATAAAATTGCCGACCTGCTGTTTTCCCTCAACCGTGAACATGGCACCACGTTGATTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGA", + "dna_sequence_length": 687, + "functions": [ + "putative ABC transporter ATPase" + ], + "id": "CDS_487", + "location": [ + [ + "NC_000913", + 519733, + "+", + 687 + ] + ], + "md5": "890706ea5a4f8c4464e171e46e653083", + "parent_gene": "", + "protein_md5": "4f52cdecd6ba96f0da8386afa0a8d56d", + "protein_translation": "MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLRLVNGQLQEEA", + "protein_translation_length": 228, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_415029.1" + ], + [ + "gene_synonym", + "b0496" + ], + [ + "gene_synonym", + "GeneID:945118" + ], + [ + "gene_synonym", + "JW0485" + ], + [ + "gene_synonym", + "ECK0490" + ], + [ + "gene_synonym", + "GI:16128480" + ], + [ + "gene_synonym", + "EcoGene:EG13263" + ], + [ + "gene_synonym", + "ASAP:ABE-0001720" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77504" + ], + [ + "gene_synonym", + "ybbP" + ] + ], + "dna_sequence": "ATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCATGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCGCCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGGATGATATCTACCCGATGTATGGCGATCTGCAAACTAATCCCCCTGGCCTGAAACCGCAGGCGGGCAGCGTATTGCTGGCCCCACGCCTGATGGCACTGCTTAACCTGAAAACGGGCGACACCATTGACGTGGGCGATGCCACCTTGCGGATTGCCGGAGAAGTGATTCAGGAACCGGATTCCGGTTTTAACCCCTTCCAGATGGCTCCGCGTCTGATGATGAATCTGGCGGATGTCGATAAAACCGGAGCCGTGCAGCCGGGGAGTCGGGTCACCTGGCGTTATAAATTCGGCGGCAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGTTACCTCAGCTTAAACCCGAACAACGCTGGTACGGTCTGGAACAGGACGAAGGCGCGCTGGGGCGATCGATGGAACGCTCGCAACAGTTCCTGCTGCTTTCGGCGCTTCTGACCTTGCTGCTGGCAGTGGCAGCGGTGGCGGTAGCGATGAATCATTACTGTCGCAGTCGCTACGATCTGGTGGCGATCCTCAAAACGCTGGGGGCAGGGCGAGCGCAACTGCGTAAGCTAATCGTCGGTCAGTGGTTGATGGTGCTGACGCTTTCAGCCGTTACCGGTGGGGCCATAGGCCTGTTGTTCGAAAACGTGTTGATGGTGCTGCTCAAGCCCGTTCTGCCTGCTGCACTACCGCCAGCCAGCCTCTGGCCGTGGCTGTGGGCGCTTGGCACCATGACGGTCATCTCGCTGCTGGTGGGGCTACGACCATATCGCTTGTTGCTGGCAACGCAGCCTTTACGCGTATTACGTAATGATGTGGTAGCGAACGTCTGGCCGCTGAAGTTTTATCTGCCGATTGTCAGTGTGGTGGTTGTGCTGCTGCTCGCCGGATTAATGGGTGGCAGCATGCTGCTTTGGGCGGTGCTGGCGGGCGCGGTAGTACTGGCTTTGCTGTGCGGTGTGCTGGGCTGGATGCTGCTGAATGTACTTCGCCGCATGACGCTGAAATCGCTGCCTCTGCGCCTGGCGGTTAGCCGCCTGTTACGTCAGCCGTGGTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAACAGGTAGCACCGCTAAAAGCGTTCCTCGCGGAACATCAGATAGTCCCGGAATCGTTTTATCCGGTGGTGCGGGCGCGGCTGACGGCGATTAACGATAAGCCGACAGAAGGTAATGAAGATGAGGCGCTTAACCGCGAACTCAATCTTACCTGGCAAAATACGCGGCCCGATCATAATCCGATTGTCGCCGGTAACTGGCCGCCAAAAGCCGATGAAGTGTCGATGGAAGAGGGGCTGGCGAAACGCTTAAACGTTGCCCTCGGTGATACCGTGACTTTTATGGGCGATACCCAGGAGTTCCGCGCTAAAGTGACCAGCCTGCGCAAAGTGGACTGGGAAAGTCTGCGGCCTAATTTCTATTTTATTTTCCCTGAAGGGGCATTAGACGGGCAACCGCAGAGCTGGCTTACCAGTTTCCGCTGGGAGAATGGCAACGGCATGTTGACACAACTCAACCGCCAGTTCCCGACCATTAGCCTGTTAGATATTGGCGCGATTTTAAAACAGGTCGGTCAGGTGCTGGAGCAGGTAAGTCGGGCGCTGGAAGTGATGGTGGTACTGGTCACCGCCTGCGGTATGTTGCTGTTGCTGGCACAGGTGCAGGTGGGAATGCGTCAGCGTCATCAGGAGCTGGTGGTGTGGCGCACACTCGGTGCGGGGAAAAAACTGCTGCGTACCACGTTGTGGTGTGAGTTCGCCATGCTTGGGTTTGTTTCCGGCCTGGTGGCCGCAATTGGTGCGGAAACGGCGCTGGCAGTGTTGCAGGCGAAAGTGTTTGATTTTCCGTGGGAGCCAGACTGGCGATTGTGGATTGTTCTGCCGTGCAGCGGAGCGCTGCTGCTGTCGCTTTTCGGCGGCTGGCTGGGTGCGCGACTGGTTAAGGGTAAGGCGCTGTTCAGGCAGTTTGCGGGGTGA", 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"MIARWFWREWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLSQQSREFMAGDRALRSSREVPQAWLEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAVDDIYPMYGDLQTNPPGLKPQAGSVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVIQEPDSGFNPFQMAPRLMMNLADVDKTGAVQPGSRVTWRYKFGGNENQLDGYEKWLLPQLKPEQRWYGLEQDEGALGRSMERSQQFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAILKTLGAGRAQLRKLIVGQWLMVLTLSAVTGGAIGLLFENVLMVLLKPVLPAALPPASLWPWLWALGTMTVISLLVGLRPYRLLLATQPLRVLRNDVVANVWPLKFYLPIVSVVVVLLLAGLMGGSMLLWAVLAGAVVLALLCGVLGWMLLNVLRRMTLKSLPLRLAVSRLLRQPWSTLSQLSAFSLSFMLLALLLVLRGDLLDRWQQQLPPESPNYFLINIATEQVAPLKAFLAEHQIVPESFYPVVRARLTAINDKPTEGNEDEALNRELNLTWQNTRPDHNPIVAGNWPPKADEVSMEEGLAKRLNVALGDTVTFMGDTQEFRAKVTSLRKVDWESLRPNFYFIFPEGALDGQPQSWLTSFRWENGNGMLTQLNRQFPTISLLDIGAILKQVGQVLEQVSRALEVMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRTLGAGKKLLRTTLWCEFAMLGFVSGLVAAIGAETALAVLQAKVFDFPWEPDWRLWIVLPCSGALLLSLFGGWLGARLVKGKALFRQFAG", + "protein_translation_length": 804, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b0497" + ], + [ + "gene_synonym", + "JW0486" + ], + [ + "gene_synonym", + "ECK0491" + ], + [ + "gene_synonym", + "GeneID:945116" + ], + [ + "gene_synonym", + "GI:16128481" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16919" + ], + [ + "gene_synonym", + "ASAP:ABE-0001724" + ], + [ + "gene_synonym", + "rhsD" + ], + [ + "gene_synonym", + "NP_415030.1" + ], + [ + "gene_synonym", + "EcoGene:EG10849" + ] + ], + "dna_sequence": "ATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGTCCGGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGCGAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAACGACAACGGCGGGCGGAGCATTCACTTTGAGCCGCTGCTGCCGGGGGAGGCGGTGTACAGCCGCAGTGAGTCAATGTGGCTGGTGCGCGGTGGTAAGGCAGCACAGCCGGACGGCCATACGCTGGCGCGGCTGTGGGGGGCGCTGCCGCCGGATATCCGGTTAAGCCCGCATCTTTACCTGGCGACCAACAGCGCACAGGGGCCGTGGTGGATACTGGGGTGGTCTGAGCGGGTGCCGGGTGCTGAGGACGTACTGCCAGCGCCGCTGCCGCCGTACCGGGTGCTTACCGGGATGGCGGACCGCTTCGGGCGGACGCTGACGTACCGGCGTGAGGCCGCCGGTGACCTGGCCGGGGAAATCACCGGCGTGACGGACGGTGCCGGGCGGGAGTTCCGTCTGGTGCTGACCACGCAGGCGCAGCGTGCGGAAGAGGCCCGCACCTCTTCGCTATCTTCTTCTGACAGTTCCCGCCCTCTCTCAGCCTCAGCGTTCCCCGACACACTGCCCGGTACCGAATACGGCCCCGACAGGGGTATCCGCCTTTCGGCGGTGTGGCTGATGCACGACCCGGCATACCCGGAGAGCCTGCCCGCTGCGCCACTGGTGCGGTACACGTATACGGAAGCCGGTGAACTGCTGGCGGTATATGACCGCAGCAATACGCAGGTGCGCGCTTTCACGTATGACGCGCAGCACCCGGGCCGGATGGTGGCGCACCGTTACGCGGGAAGGCCGGAGATGCGCTACCGCTACGACGATACGGGGCGGGTGGTGGAGCAACTGAACCCGGCAGGGTTAAGCTACCGCTATCTTTATGAGCAGGACCGCATCACCGTCACCGACAGCCTGAACCGGCGTGAGGTGCTGCATACAGAAGGCGGGGCCGGGCTGAAACGGGTGGTGAAAAAAGAACTGGCGGACGGCAGCGTCACGCGCAGCGGGTATGACGCGGCAGGAAGGCTCACGGCGCAGACGGACGCGGCGGGACGGAGGACAGAGTACGGTCTGAATGTGGTGTCCGGCGATATCACGGACATCACCACACCGGACGGGCGGGAGACGAAATTTTACTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGCGACGACAACGGATGCGACGGGCAGCACCCGGCAGATGACCTGGAGCCGCTACGGGCAGTTGCTGGCGTTCACCGACTGCTCGGGCTACCAGACCCGTTATGAATACGACCGCTTCGGCCAGATGACGGCGGTCCACCGCGAGGAAGGCATCAGCCTTTACCGCCGCTATGACAACCGTGGCCGGTTAACCTCGGTGAAAGACGCACAGGGCCGTGAAACGCGGTATGAATACAACGCCGCAGGCGACCTGACTGCCGTTATCACCCCGGACGGCAACCGGAGCGAGACACAGTACGATGCGTGGGGAAAGGCGGTCAGCACCACGCAGGGCGGGCTGACGCGCAGTATGGAGTACGATGCTGCCGGACGTGTCATCAGCCTGACCAACGAGAACGGCAGCCACAGCGTCTTCAGTTACGATGCGCTGGACCGGCTGGTACAGCAGGGCGGCTTTGACGGGCGGACGCAACGTTATCATTATGACCTGACCGGAAAACTCACACAGAGTGAGGATGAGGGACTTGTCATCCTCTGGTACTACGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCACGGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGGGGGAACTGCTGTGGCAGCATGAGACGAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGCCGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTGAGACGGTGCGCAGCTTCGGCAGCATGGCAGGCAGTAATGCCGCATACGAACTGACCAGCACATACACCCCCGCAGGCCAGTTACAGAGCCAGCACCTGAACAGCCTGGTATATGACCGTGACTACGGGTGGAGTGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGGATAACCGCATCGCGGAGGATGCGCACTATGTCTACCGCCACGATGAATACGGCAGGCTGACGGAGAAGACGGACCGCATCCCGGCGGGTGTGATACGGACGGACGACGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGCTGGGACGGAGACAGGCTGACGACGGTGCAGACTGACACCACACGTATCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGTTGCAGGGGCGGTATATTACTCAGGACCCGATGGGGTTGAAAGGGGGATGGAATTTATATCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGGAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGATGCTTTGAAAGAAACGCAGAATAGATCTCTATGTAATGATATGGAATACTCTGGTATTGTCTGTAAAGATACTAATGGAAAATATTTTGCATCTAAGGCAGAAACTGATAATTTAAGAAAGGAGTCATATCCTCTGAAAAGAAAATGTCCCACAGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGCATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAA", 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"UniProtKB/Swiss-Prot:P75712" + ], + [ + "gene_synonym", + "allP" + ], + [ + "gene_synonym", + "ybbW" + ] + ], + "dna_sequence": 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"gene_synonym", + "b0515" + ], + [ + "gene_synonym", + "allE" + ], + [ + "gene_synonym", + "ughY" + ], + [ + "gene_synonym", + "JW0503" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75713" + ], + [ + "gene_synonym", + "NP_415048.1" + ], + [ + "gene_synonym", + "ECK0508" + ], + [ + "gene_synonym", + "GI:16128499" + ] + ], + "dna_sequence": 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"a9e5cd4ebf3e938b8419ca1eb159114b", + "parent_gene": "", + "protein_md5": "9653e1d8690b5d25bdda3e247f40cca6", + "protein_translation": "MGYLNNVTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGYAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16128500" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77425" + ], + [ + "gene_synonym", + "ASAP:ABE-0001777" + ], + [ + "gene_synonym", + "ylbB" + ], + [ + "gene_synonym", + "allC" + ], + [ + "gene_synonym", + "EcoGene:EG13623" + ], + [ + "gene_synonym", + "GeneID:945150" + ], + [ + "gene_synonym", + "b0516" + ], + [ + "gene_synonym", + "glxB7" + ], + [ + "gene_synonym", + "JW0504" + ], + [ + "gene_synonym", + "ECK0509" + ], + [ + "gene_synonym", + "NP_415049.1" + ] + ], + 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"ATGATTACACATTTCCGTCAAGCTATAGAAGAAACGCTGCCCTGGCTTTCCTCTTTTGGCGCTGACCCAGCGGGTGGGATGACCCGTTTACTTTATTCGCCGGAATGGCTGGAAACCCAGCAGCAATTTAAAAAAAGAATGGCAGCAAGCGGGCTGGAAACACGTTTCGATGAAGTGGGGAATTTATACGGTCGCCTGAATGGCACCGAATATCCACAGGAAGTGGTTCTGAGCGGTTCGCATATCGATACCGTGGTTAACGGCGGTAACCTTGACGGGCAATTCGGCGCGCTGGCGGCGTGGCTGGCAATTGACTGGCTGAAAACGCAATACGGCGCGCCGCTACGTACGGTCGAAGTGGTGGCGATGGCAGAAGAAGAAGGCAGCCGCTTCCCGTATGTCTTCTGGGGCAGTAAAAATATTTTTGGGCTGGCGAATCCTGACGACGTGCGGAATATCTGTGATGCCAAAGGAAATAGTTTTGTCGATGCGATGAAGGCTTGCGGATTTACTCTTCCGAACGCCCCACTAACTCCGCGTCAGGATATTAAAGCCTTTGTTGAACTGCATATTGAACAGGGCTGTGTGCTGGAAAGTAATGGGCAATCAATTGGCGTGGTGAATGCAATTGTCGGGCAGCGTCGTTATACGGTAACGCTGAACGGCGAATCAAACCATGCAGGCACCACGCCGATGGGTTATCGTCGTGATACAGTTTACGCTTTCAGTCGCATTTGCCATCAGTCGGTCGAAAAAGCGAAAAGGATGGGCGATCCGCTGGTTCTGACCTTTGGCAAAGTAGAGCCGCGCCCGAATACGGTAAATGTGGTGCCGGGTAAAACCACGTTCACCATTGATTGTCGTCATACCGACGCTGCCGTGCTGCGCGATTTCACCCAACAGTTAGAAAACGACATGCGGGCGATTTGCGATGAAATGGACATTGGTATTGATATCGATTTATGGATGGACGAAGAACCCGTGCCGATGAATAAGGAGCTGGTCGCCACCCTGACAGAATTGTGTGAAAGAGAAAAACTGAATTACCGGGTGATGCACAGTGGTGCCGGGCACGACGCGCAAATTTTCGCGCCTCGCGTACCAACCTGCATGATTTTTATCCCCAGCATCAACGGGATCAGCCATAACCCGGCGGAACGCACCAATATTACCGACCTTGCCGAAGGGGTCAAAACGTTGGCACTCATGCTTTATCAACTTGCCTGGCAGAAATAA", 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"ASAP:ABE-0001780" + ], + [ + "gene_synonym", + "GeneID:948342" + ], + [ + "gene_synonym", + "glxB8" + ], + [ + "gene_synonym", + "b0517" + ], + [ + "gene_synonym", + "ECK0510" + ], + [ + "gene_synonym", + "NP_415050.1" + ], + [ + "gene_synonym", + "JW0505" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77555" + ] + ], + "dna_sequence": "ATGAAAATCAGTCGGGAAACACTCCACCAGCTAATTGAGAATAAACTCTGCCAGGCTGGGTTAAAACGTGAGCACGCTGCAACCGTGGCTGAAGTATTGGTTTACGCCGATGCCAGAGGGATCCACTCTCATGGCGCGGTGCGCGTGGAATACTACGCGGAACGCATTTCAAAAGGCGGCACCAACCGCGAACCGGAGTTTCGTCTTGAGGAAACCGGGCCGTGCTCGGCAATTTTACATGCCGACAATGCCGCCGGACAGGTCGCGGCGAAAATGGGTATGGAACATGCCATCAAAACCGCCCAGCAAAATGGCGTTGCGGTGGTCGGTATCAGCCGGATGGGTCACAGCGGCGCAATCTCTTATTTTGTGCAGCAGGCAGCCCGCGCCGGATTCATTGGCATTTCGATGTGCCAGTCCGATCCAATGGTGGTGCCGTTTGGCGGCGCGGAAATTTACTACGGTACTAACCCCCTGGCCTTTGCCGCGCCGGGAGAAGGCGACGAGATCCTTACCTTTGATATGGCGACTACCGTACAGGCATGGGGAAAAGTGCTCGACGCCCGCTCGCGTAATATGTCTATCCCGGATACCTGGGCGGTCGATAAAAACGGTGTACCAACAACCGATCCGTTCGCGGTACATGCTCTGCTCCCCGCCGCCGGGCCAAAAGGGTATGGCCTGATGATGATGATTGACGTCCTCTCAGGCGTCTTACTCGGCTTACCGTTCGGGCGACAGGTTAGTTCGATGTATGACGATTTACACGCAGGGCGTAATTTGGGGCAATTACATATAGTTATTAATCCGAACTTTTTCTCCTCCAGCGAATTATTCCGTCAACATCTTAGCCAGACCATGCGCGAATTAAATGCCATTACCCCCGCGCCCGGTTTTAATCAGGTTTATTATCCCGGACAGGATCAGGATATTAAACAACGCAAAGCCGCCGTCGAAGGCATCGAAATTGTTGATGATATTTACCAGTATTTAATTTCCGACGCGCTTTATAACACGTCATACGAAACGAAAAATCCCTTTGCGCAATAA", 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"NP_415051.1" + ], + [ + "gene_synonym", + "ECK0511" + ], + [ + "gene_synonym", + "JW0506" + ], + [ + "gene_synonym", + "fdrA" + ], + [ + "gene_synonym", + "GeneID:946298" + ], + [ + "gene_synonym", + "EcoGene:EG13399" + ] + ], + "dna_sequence": "ATGATCCACGCCTTTATTAAAAAAGGGTGTTTTCAGGATTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAGGGGTCAGGCAGCAGCCAGGCGTTGACGCAGGTGCGTCGCTGGGACAGTGCCTGTCAGAAATTACCCGATGCCAATCTGGCGCTGATTTCAGTGGCTGGCGAGTATGCGGCGGAGCTGGCAAACCAGGCGCTGGATCGCAACCTCAACGTGATGATGTTCTCCGATAACGTCACGCTGGAAGATGAAATCCAACTTAAAACCCGCGCGCGGGAAAAAGGCTTGCTGGTGATGGGGCCGGACTGCGGTACGTCGATGATTGCCGGCACACCGCTGGCTTTTGCTAACGTGATGCCGGAAGGCAATATTGGCGTCATTGGCGCTTCCGGTACCGGGATTCAGGAGCTGTGTTCGCAGATTGCGCTGGCAGGGGAGGGAATTACTCACGCGATTGGCCTTGGCGGGCGCGACCTCAGCCGTGAAGTGGGCGGCATCAGTGCGCTAACAGCGCTGGAAATGCTCAGTGCAGACGAGAAAAGCGAAGTGCTGGCATTTGTTTCAAAACCACCTGCCGAAGCTGTGCGTCTGAAAATTGTTAATGCCATGAAAGCAACCGGCAAACCGACGGTGGCGCTGTTTTTAGGTTATACCCCGGCGGTGGCCCGCGACGAGAATGTCTGGTTTGCCTCCTCGCTGGATGAGGCCGCACGCCTGGCTTGCCTGCTTTCACGCGTCACGGCGCGACGTAACGCAATAGCGCCTGTCAGCAGCGGATTTATTTGCGGTTTGTATACCGGCGGTACGCTGGCTGCCGAAGCGGCGGGATTACTTGCCGGACACCTTGGCGTGGAAGCCGACGATACCCATCAACATGGCATGATGCTGGACGCCGATAGCCACCAGATTATTGACCTCGGCGATGATTTCTACACCGTCGGGCGTCCCCATCCGATGATCGACCCAACCTTACGCAACCAGTTAATTGCCGATCTCGGCGCTAAACCGCAAGTGCGCGTGTTGCTGCTTGATGTCGTGATTGGCTTCGGTGCGACCGCCGATCCTGCCGCCTCGCTGGTGAGCGCCTGGCAAAAAGCCTGTGCCGCGCGTTTAGATAATCAACCACTGTATGCCATTGCCACGGTGACAGGCACTGAACGTGACCCGCAATGCCGCTCGCAGCAAATCGCCACGCTGGAAGATGCGGGGATTGCGGTCGTGAGTTCGCTACCGGAAGCCACCTTGCTGGCGGCAGCGTTAATTCATCCGCTCTCGCCTGCCGCACAGCAACACACACCGTCATTACTGGAAAACGTCGCCGTGATTAACATCGGATTACGCAGCTTTGCGCTGGAGCTACAAAGCGCCAGCAAACCGGTTGTGCATTACCAATGGTCGCCAGTCGCCGGTGGCAATAAAAAACTGGCTCGTTTATTAGAACGTTTGCAATAA", + "dna_sequence_length": 1668, + "functions": [ + "putative NAD(P)-binding acyl-CoA synthetase" + ], + "id": "CDS_509", + "location": [ + [ + "NC_000913", + 546680, + "+", + 1668 + ] + ], + "md5": "8e26a98cbe3c3e0a22b9586ec3689906", + "parent_gene": "", + "protein_md5": "158c8cf7e75062826c115ddb3eb90f36", + "protein_translation": "MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSPAAQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ", + "protein_translation_length": 555, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + 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"fimA" + ], + [ + "gene_synonym", + "sfmA" + ], + [ + "gene_synonym", + "b0530" + ], + [ + "gene_synonym", + "JW0519" + ] + ], + "dna_sequence": "ATGAAATTAAGATTTATTTCGTCTGCGCTGGCTGCCGCACTATTCGCCGCTACGGGTAGTTATGCTGCCGTTGTAGATGGCGGTACAATTCACTTTGAAGGCGAACTGGTGAATGCTGCCTGTTCAGTGAATACTGACTCGGCAGACCAGGTTGTCACACTCGGTCAATATCGTACCGATATTTTCAATGCTGTTGGTAATACCTCTGCATTAATTCCATTCACCATTCAGTTGAACGACTGCGATCCTGTTGTTGCCGCTAATGCTGCCGTTGCATTTTCTGGTCAGGCTGATGCAATCAATGATAATTTATTGGCCATTGCATCCAGTACCAATACAACAACAGCAACGGGTGTCGGTATTGAAATACTTGATAATACATCCGCAATTCTCAAACCTGATGGGAATAGCTTCTCAACCAACCAGAACTTGATCCCCGGGACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAGGGCAAGCAAATGCTGACGCGACTTTTATTATGAGATATGAATAA", + "dna_sequence_length": 543, + "functions": [ + "FimA homolog, function unknown" + ], + "id": "CDS_521", + "location": [ + [ + "NC_000913", + 558212, + "+", + 543 + ] + ], + "md5": "7b688357ba2baf75b57377617fb96ce8", + "parent_gene": "", + "protein_md5": "d8b6dc9b6b16c07d82c1260cd9c31108", + 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"ATGATGACTAAAATAAAGTTATTGATGCTCATTATATTTTATTTAATCATTTCGGCCAGCGCCCATGCTGCCGGAGGGATCGCATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGTTGGGGAATGCTATGGCTGCACCCAGAGTTAATTCACAAATTCCCTTACCCTCAGGAGTGCAGGGAAAGCTGAAATTTCAGACCGTTAATGATTATGGTTCAGTAACTCCGGTCAGAGAAGTGAACTTAAACTAA", + "dna_sequence_length": 693, + "functions": [ + "putative periplasmic pilus chaperone" + ], + "id": "CDS_522", + "location": [ + [ + "NC_000913", + 558974, + "+", + 693 + ] + ], + "md5": "58000748ddb33ee07c9c818981697448", + "parent_gene": "", + "protein_md5": "0f2e160654ea02ed170b76148c1c6487", + 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"MKIPTTTDIPQRYTWCLAGICYSSLAILPSFLSYAESYFNPAFLLENGTSVADLSRFERGNHQPAGVYRVDLWRNDEFIGSQDIVFESTTENTGDKSGGLMPCFNQVLLERIGLNSSAFPELAQQQNNKCINLLKAVPDATINFDFAAMRLNITIPQIALLSSAHGYIPPEEWDEGIPALLLNYNFTGNRGNGNDSYFFSELSGINIGPWRLRNNGSWNYFRGNGYHSEQWNNIGTWVQRAIIPLKSELVMGDGNTGSDIFDGVGFRGVRLYSSDNMYPDSQQGFAPTVRGIARTAAQLTIRQNGFIIYQSYVSPGAFEITDLHPTSSNGDLDVTIDERDGNQQNYTIPYSTVPILQREGRFKFDLTAGDFRSGNSQQSSPFFFQGTALGGLPQEFTAYGGTQLSANYTAFLLGLGRNLGNWGAVSLDVTHARSQLADASRHEGDSIRFLYAKSMNTFGTNFQLMGYRYSTQGFYTLDDVAYRRMEGYEYDYDGEHRDEPIIVNYHNLRFSRKDRLQLNVSQSLNDFGSLYISGTHQKYWNTSDSDTWYQVGYTSSWVGISYSLSFSWNESVGIPDNERIVGLNVSVPFNVLTKRRYTRENALDRAYASFNANRNSNGQNSWLAGVGGTLLEGHNLSYHVSQGDTSNNGYTGSATANWQAAYGTLGGGYNYDRDQHDVNWQLSGGVVGHENGITLSQPLGDTNVLIKAPGAGGVRIENQTGILTDWRGYAVMLYATVYRYNRIALDTNTMGNSIDVEKNISSVVPTQGALVRANFDTRIGVRALITVTQGGKPVPFGSLVRENSTGITSMVGDDGQVYLSGAPLSGELLVQWGDGANSRCIAHYVLPKQSLQQAVTVISAVCTHPGS", + "protein_translation_length": 867, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "sfmH" + ], + [ + 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"functions": [ + "DLP12 prophage", + "outer membrane protease VII", + "outer membrane protein 3b" + ], + "id": "CDS_561", + "location": [ + [ + "NC_000913", + 585633, + "-", + 954 + ] + ], + "md5": "504b514126a585a672b65363e26eceab", + "parent_gene": "", + "protein_md5": "77f9e93fe5de27017f7ed8d046edb071", + "protein_translation": "MRAKLLGIVLTTPIAISSFASTETLSFTPDNINADISLGTLSGKTKERVYLAEEGGRKVSQLDWKFNNAAIIKGAINWDLMPQISIGAAGWTTLGSRGGNMVDQDWMDSSNPGTWTDESRHPDTQLNYANEFDLNIKGWLLNEPNYRLGLMAGYQESRYSFTARGGSYIYSSEEGFRDDIGSFPNGERAIGYKQRFKMPYIGLTGSYRYEDFELGGTFKYSGWVESSDNDEHYDPGKRITYRSKVKDQNYYSVAVNAGYYVTPNAKVYVEGAWNRVTNKKGNTSLYDHNNNTSDYSKNGAGIENYNFITTAGLKYTF", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10805" + ], + [ + "gene_synonym", + "envY" + ], + [ + "gene_synonym", + "ECK0558" + ], + [ + "gene_synonym", + "JW0555" + ], + [ + "gene_synonym", + "b0566" + ], + [ + "gene_synonym", + "ASAP:ABE-0001935" + ], + [ + "gene_synonym", + "NP_415098.1" + ], + [ + "gene_synonym", + "EcoGene:EG10268" + ], + [ + "gene_synonym", + "GI:16128549" + ], + [ + "gene_synonym", + "GeneID:949114" + ] + ], + "dna_sequence": "ATGCAATTGAGCAGCAGTGAACCTTGCGTGGTGATCCTGACCGAAAAAGAGGTAGAGGTAAGCGTCAATAACCATGCTACGTTTACCCTTCCGAAAAACTACCTGGCCGCCTTCGCGTGCAACAATAACGTCATTGAACTCTCAACGTTAAATCACGTATTAATCACCCACATCAACCGTAACATCATCAACGATTATCTGTTGTTTTTAAATAAGAACTTAACCTGTGTAAAGCCCTGGTCGCGGCTGGCAACCCCGGTTATCGCTTGTCATAGCCGTACACCGGAAGTGTTCCGGCTAGCCGCCAACCACAGCAAGCAGCAACCCAGCAGACCCTGCGAAGCGGAGTTGACGCGCGCATTGCTTTTTACCGTATTGTCTAACTTTCTTGAGCAATCGCGGTTTATTGCCCTACTGATGTATATCTTACGCAGCAGCGTCCGCGACAGCGTCTGCCGCATTATTCAAAGCGATATTCAGCATTACTGGAATCTGCGAATTGTCGCCAGTTCGCTATGTTTAAGCCCCAGCCTGCTCAAAAAGAAATTAAAAAACGAAAATACCAGCTATAGCCAGATTGTCACAGAGTGTCGTATGCGTTACGCCGTACAGATGTTATTGATGGATAACAAAAATATCACTCAGGTGGCGCAATTATGTGGCTATAGCAGCACGTCGTACTTTATCTCTGTTTTTAAGGCGTTTTACGGCCTGACACCGTTGAATTATCTCGCCAAACAGCGACAAAAAGTGATGTGGTGA", + "dna_sequence_length": 762, + 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"dna_sequence_length": 891, + "functions": [ + "PRK09936 family protein" + ], + "id": "CDS_563", + "location": [ + [ + "NC_000913", + 587981, + "-", + 891 + ] + ], + "md5": "33c61b7e0a3b9a3d4d336a6ce061c8eb", + "parent_gene": "", + "protein_md5": "4f904c2e71c90e728478ed471c1a5322", + "protein_translation": "MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLMSQLRLQGFDTLVLQWTRYGDAFTQPEQRTLLFKRAAAAQQAGLKLIVGLNADPEFFMHQKQSSAALESYLNRLLAADLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLLTWLNNAQRLISDVSAKPVYISSFFAGNMSPDGYRQLLEHVKATGVNVWVQDGSGVDKLTAEQRERYLQASADCQSPAPASGVVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCGKDTLYFSLRYLPVAHGILEY", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001939" + ], + [ + "gene_synonym", + "b0568" + ], + [ + "gene_synonym", + "ECK0560" + ], + [ + "gene_synonym", + "JW0557" + ], + [ + "gene_synonym", + "nfrA" + ], + [ + "gene_synonym", + "GeneID:944741" + ], + [ + "gene_synonym", + "EcoGene:EG11740" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31600" + ], + [ + "gene_synonym", + "NP_415100.1" + ], + [ + "gene_synonym", + "GI:16128551" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "ECK0563" + ], + [ + "gene_synonym", + "NP_415103.1" + ], + [ + "gene_synonym", + "ylcA" + ], + [ + "gene_synonym", + "JW0560" + ], + [ + "gene_synonym", + "silR" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACZ8" + ], + [ + "gene_synonym", + "ASAP:ABE-0001948" + ], + [ + "gene_synonym", + "GeneID:945003" + ], + [ + "gene_synonym", + "GI:16128554" + ], + [ + "gene_synonym", + "EcoGene:EG13851" + ] + ], + "dna_sequence": 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"JW0577" + ], + [ + "gene_synonym", + "EcoGene:EG14353" + ], + [ + "gene_synonym", + "GeneID:1450243" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18393" + ], + [ + "gene_synonym", + "ASAP:ABE-0285032" + ], + [ + "gene_synonym", + "b4511" + ], + [ + "gene_synonym", + "mbtH" + ] + ], + "dna_sequence": "ATGGCATTCAGTAATCCCTTCGATGATCCGCAGGGAGCGTTTTACATATTGCGCAATGCGCAGGGGCAATTCAGTCTGTGGCCGCAACAATGCGTCTTACCGGCAGGCTGGGACATTGTGTGTCAGCCGCAGTCACAGGCGTCCTGCCAGCAGTGGCTGGAAGCCCACTGGCGTACTCTGACACCGACGAATTTTACCCAGTTGCAGGAGGCACAATGA", + "dna_sequence_length": 219, + "functions": [ + "stimulator of EntF adenylation activity, MbtH-like" + ], + "id": "CDS_583", + "location": [ + [ + "NC_000913", + 613942, + "+", + 219 + ] + ], + "md5": "c1826f113eeaee30c647c48353a15cee", + "parent_gene": "", + "protein_md5": "786c1042684c5244e90cd312b3af7734", + "protein_translation": "MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCVLPAGWDIVCQPQSQASCQQWLEAHWRTLTPTNFTQLQEAQ", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b0586" + ], + [ + "gene_synonym", + "ASAP:ABE-0002021" + ], + [ + "gene_synonym", + "entF" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11454" + ], + [ + "gene_synonym", + "ECK0579" + ], + [ + "gene_synonym", + "GeneID:945184" + ], + [ + "gene_synonym", + "EcoGene:EG10264" + ], + [ + "gene_synonym", + "NP_415118.1" + ], + [ + "gene_synonym", + "GI:16128569" + ], + [ + "gene_synonym", + "JW0578" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16128577" + ], + [ + "gene_synonym", + "ASAP:ABE-0002049" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10378" + ], + [ + "gene_synonym", + "JW0586" + ], + [ + "gene_synonym", + "EcoGene:EG10263" + ] + ], + "dna_sequence": 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"gene_synonym", + "entB" + ], + [ + "gene_synonym", + "b0595" + ], + [ + "gene_synonym", + "ECK0588" + ], + [ + "gene_synonym", + "entG" + ], + [ + "gene_synonym", + "NP_415127.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0002052" + ], + [ + "gene_synonym", + "GI:16128578" + ], + [ + "gene_synonym", + "GeneID:946178" + ], + [ + "gene_synonym", + "EcoGene:EG10260" + ], + [ + "gene_synonym", + "JW0587" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADI4" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P0AAS9" + ], + [ + "gene_synonym", + "JW0591" + ], + [ + "gene_synonym", + "b4512" + ], + [ + "gene_synonym", + "GeneID:949021" + ], + [ + "gene_synonym", + "ybdD" + ], + [ + "gene_synonym", + "GI:94541100" + ] + ], + "dna_sequence": "ATGTTTGATTCACTGGCAAAAGCCGGAAAATATTTAGGTCAGGCGGCGAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAA", + "dna_sequence_length": 198, + "functions": [ + "DUF466 family protein" + ], + "id": "CDS_597", + "location": [ + [ + "NC_000913", + 632182, + "+", + 198 + ] + ], + "md5": "6ee16c62919d18423f92b2508ab0a10a", + "parent_gene": "", + "protein_md5": "95856758bc910f75b955633a0b386897", + "protein_translation": "MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTYEEFFRERQDARYGGKGGARCC", + "protein_translation_length": 65, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:945212" + ], + [ + "gene_synonym", + "b0599" + ], + [ + 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"gene_synonym", + "b0600" + ], + [ + "gene_synonym", + "ybdL" + ], + [ + "gene_synonym", + "JW0593" + ], + [ + "gene_synonym", + "GI:16128583" + ], + [ + "gene_synonym", + "NP_415133.1" + ] + ], + "dna_sequence": 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"gene_synonym", + "b0601" + ], + [ + "gene_synonym", + "ybdM" + ], + [ + "gene_synonym", + "ASAP:ABE-0002071" + ], + [ + "gene_synonym", + "ECK0595" + ], + [ + "gene_synonym", + "GI:16128584" + ], + [ + "gene_synonym", + "JW0594" + ] + ], + "dna_sequence": "ATGGGGGATACTATGCAACAACGATTAACGCAGGATTTAACGCAATTTCTCGCCAGCTTGCCGGAAGATGATCGCATCAAAGCGATTAATGAAATCCGCATGGCGATCCATCAGGTTAGCCCCTTTCGTGAAGAGCCAGTGGATTGCGTTCTGTGGGTTAAAAACAGCCAACTTATGCCTAATGATTACAACCCAAACAACGTGGCACCACCCGAAAAAAAACTGCTGCAAAAATCCATTGAAATAGATGGTTTTACCCAACCCATTGTGGTCACACATACGGATAAAAATGCCATGGAAATCGTGGATGGTTTTCACCGCCATGAAATTGGTAAAGGCTCATCATCATTAAAATTACGCTTAAAAGGTTATTTGCCGGTGACCTGTCTGGAAGGTACGCGTAATCAACGCATCGCCGCGACTATTCGTCATAATCGCGCTCGTGGACGCCATCAAATCACCGCCATGTCGGAAATCGTCCGTGAACTTAGCCAGTTGGGATGGGACGATAATAAAATTGGCAAAGAGCTGGGAATGGACAGCGACGAAGTGCTGCGCCTGAAGCAAATTAACGGCCTGCAAGAGTTGTTTGCCGACCGTCAATATTCCCGCGCCTGGACGGTTAAATAG", + "dna_sequence_length": 630, + "functions": [ + "Spo0J family protein, ParB-like nuclease domain" + ], + 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"ATGTCTTTAGCAAAAGATAATATATGGAAACTATTGGCCCCACTGGTGGTGATGGGTGTCATGTTTCTTATCCCTGTCCCCGACGGTATGCCGCCGCAGGCATGGCATTACTTCGCTGTGTTTGTGGCAATGATTGTCGGCATGATCCTCGAGCCAATTCCGGCAACAGCGATCAGTTTTATTGCGGTTACTATTTGCGTTATTGGCAGTAATTACCTGCTCTTTGATGCCAAAGAATTAGCTGACCCAGCGTTTAATGCGCAAAAACAGGCGCTGAAATGGGGCCTGGCTGGTTTTTCCAGCACCACGGTATGGCTGGTATTTGGCGCATTTATTTTTGCATTAGGGTATGAAGTTTCCGGGTTAGGTCGTCGCATTGCCCTTTTCCTGGTGAAATTCATGGGCAAACGCACGCTGACGTTGGGTTATGCGATTGTCATTATCGACATTCTGCTGGCACCGTTTACACCTTCCAACACCGCGCGTACCGGGGGTACGGTTTTTCCGGTCATTAAAAACCTGCCGCCGTTGTTTAAATCATTCCCGAACGATCCGTCCGCGCGTCGTATTGGCGGCTATTTGATGTGGATGATGGTCATTAGTACCAGTCTGAGTTCGTCCATGTTTGTCACCGGTGCGGCACCAAACGTGCTGGGTCTGGAGTTCGTCAGCAAAATTGCCGGTATCCAGATTAGCTGGTTGCAGTGGTTCCTCTGCTTCCTGCCGGTTGGGGTTATCTTGCTTATCATTGCGCCGTGGCTTTCCTACGTGCTGTACAAACCGGAAATCACACACAGTGAAGAAGTGGCAACCTGGGCGGGTGATGAACTGAAAACCATGGGTGCGCTGACACGCAGAGAGTGGACACTGATTGGCCTTGTATTGCTCAGCTTAGGTTTGTGGGTATTTGGCAGTGAAGTCATTAATGCTACTGCGGTTGGTCTGCTGGCAGTTTCGCTAATGCTGGCCCTGCACGTTGTGCCTTGGAAAGACATTACCCGCTATAACAGCGCATGGAACACACTGGTCAACCTGGCAACTCTGGTTGTGATGGCTAACGGCCTGACTCGTTCTGGTTTTATTGACTGGTTCGCCGGTACCATGAGTACGCACCTGGAAGGATTCTCACCAAACGCAACGGTGATTGTACTGGTTCTGGTGTTCTACTTTGCACACTACCTGTTTGCCAGCCTGTCTGCGCACACCGCAACCATGCTGCCGGTTATTCTGGCCGTCGGTAAAGGTATTCCGGGCGTACCAATGGAACAACTGTGTATCCTGCTGGTGCTGTCTATCGGTATCATGGGCTGTCTGACGCCGTATGCAACCGGTCCTGGGGTGATTATTTACGGCTGTGGCTATGTGAAATCAAAAGATTACTGGCGTCTTGGCGCAATCTTCGGGGTGATTTACATCTCTATGTTGCTGTTGGTTGGCTGGCCGATTCTCGCCATGTGGAACTAA", 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"UniProtKB/Swiss-Prot:P77231" + ], + [ + "gene_synonym", + "ECK0606" + ], + [ + "gene_synonym", + "GeneID:946395" + ], + [ + "gene_synonym", + "JW0605" + ], + [ + "gene_synonym", + "ybdT" + ], + [ + "gene_synonym", + "b0613" + ], + [ + "gene_synonym", + "ASAP:ABE-0002114" + ], + [ + "gene_synonym", + "NP_415146.1" + ], + [ + "gene_synonym", + "GI:16128596" + ], + [ + "gene_synonym", + "citG" + ] + ], + "dna_sequence": 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"id": "CDS_611", + "location": [ + [ + "NC_000913", + 647509, + "-", + 879 + ] + ], + "md5": "b4b1057e26250b0331d35675749da33c", + "parent_gene": "", + "protein_md5": "a27ce1a7c7f7369ee4e47a9563e148fa", + "protein_translation": "MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTNNSQLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMAINGDTNVASRGGEGGLRWLQREAQTLLQKGGIRTPADLDYLRQFDRECIERNLSPGGSADLLILTWFLAQI", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "citX" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6G5" + ], + [ + "gene_synonym", + "ASAP:ABE-0002116" + ], + [ + "gene_synonym", + "GeneID:949084" + ], + [ + "gene_synonym", + "ECK0607" + ], + [ + "gene_synonym", + "ybdU" + ], + [ + "gene_synonym", + "JW0606" + ], + [ + "gene_synonym", + "NP_415147.1" + ], + [ + "gene_synonym", + "b0614" + ], + [ + "gene_synonym", + "EcoGene:EG13540" + ], + [ + "gene_synonym", + "GI:16128597" + ] + ], + "dna_sequence": "ATGCACCTGCTTCCTGAACTCGCCAGCCACCATGCGGTATCAATTCCCGAGCTGCTCGTCAGCCGGGATGAAAGGCAAGCACGGCAACACGTCTGGCTCAAGCGCCATCCTGTTCCACTGGTCTCCTTTACCGTGGTTGCGCCTGGGCCGATTAAAGACAGCGAGGTCACACGCCGAATTTTTAATCATGGCGTGACAGCCTTGCGTGCCTTAGCCGCAAAACAGGGCTGGCAAATTCAGGAGCAGGCTGCACTGGTTTCCGCCAGCGGGCCGGAGGGCATGTTGAGCATTGCCGCCCCGGCTCGCGACCTCAAGCTCGCCACCATTGAGCTTGAACATAGTCATCCTCTCGGGCGGTTATGGGATATCGATGTCCTGACGCCCGAAGGCGAAATTCTCTCCCGCCGCGACTATTCACTGCCGCCTCGCCGCTGCCTGTTGTGCGAACAAAGCGCAGCCGTCTGCGCGCGTGGAAAAACCCATCAACTGACCGATTTACTCAACCGCATGGAGGCACTGCTGAACGATGTCGATGCCTGCAACGTCAACTAA", + "dna_sequence_length": 552, + "functions": [ + "apo-citrate lyase phosphoribosyl-dephospho-CoA transferase" + ], + "id": "CDS_612", + "location": [ + [ + "NC_000913", + 648035, + "-", + 552 + ] + ], + "md5": "e0704199963d3ef2c2b00ba9b6afbbe3", + "parent_gene": "", + "protein_md5": "55962c696a5d196a123b462b4b9fca6c", + "protein_translation": "MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFTVVAPGPIKDSEVTRRIFNHGVTALRALAAKQGWQIQEQAALVSASGPEGMLSIAAPARDLKLATIELEHSHPLGRLWDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKTHQLTDLLNRMEALLNDVDACNVN", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16128598" + ], + [ + "gene_synonym", + "ECK0608" + ], + [ + "gene_synonym", + "ybdV" + ], + [ + "gene_synonym", + "JW5087" + ], + [ + "gene_synonym", + "citF" + ], + [ + "gene_synonym", + "b0615" + ], + [ + "gene_synonym", + "ASAP:ABE-0002119" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75726" + ], + [ + "gene_synonym", + "GeneID:945230" + ], + [ + "gene_synonym", + "EcoGene:EG13541" + ], + [ + "gene_synonym", + "NP_415148.1" + ] + ], + "dna_sequence": 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"ECK0609" + ], + [ + "gene_synonym", + "ybdW" + ], + [ + "gene_synonym", + "b0616" + ], + [ + "gene_synonym", + "EcoGene:EG13542" + ], + [ + "gene_synonym", + "GI:90111153" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9I1" + ], + [ + "gene_synonym", + "ASAP:ABE-0002122" + ], + [ + "gene_synonym", + "citE" + ], + [ + "gene_synonym", + "NP_415149.4" + ], + [ + "gene_synonym", + "GeneID:945406" + ] + ], + "dna_sequence": 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TPR-like repeat protein" + ], + "id": "CDS_644", + "location": [ + [ + "NC_000913", + 679406, + "-", + 555 + ] + ], + "md5": "57107a1963591612537c8b55ae9fc8a2", + "parent_gene": "", + "protein_md5": "6422895354a07641705e2f084092d184", + "protein_translation": "MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMVNYAFDYLSSPGSLPFTTAATELSAIHGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLTAKQHYKNAERLLAGLPAH", + "protein_translation_length": 184, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77427" + ], + [ + "gene_synonym", + "b0648" + ], + [ + "gene_synonym", + "JW0643" + ], + [ + "gene_synonym", + "ybeU" + ], + [ + "gene_synonym", + "GI:16128631" + ], + [ + "gene_synonym", + "ECK0641" + ], + [ + "gene_synonym", + "EcoGene:EG13651" + ], + [ + "gene_synonym", + "GeneID:945244" + ], + [ + "gene_synonym", + "ASAP:ABE-0002220" + ], + [ + "gene_synonym", + "NP_415181.1" + ] + ], + "dna_sequence": 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"protein_translation": "MNKEEQYLLFALSAPMEILNQGCKPAHDSPKMYTGIKEFELSSSWGINNRDDLIQTIYQMTDDGHANDLAGLYLTWHRSSPEEWKALIAGGSERGLIYTQFVAQTAMCCGEGGIKAWDYVRMGFLSRVGVLNKWLTEEESLWLQSRVYVRAHHYYHSWMHYFSAYSLGRLYWQSSQCEDNTSLREALTLYKYDSAGSRMFEELAAGSDRFYATLPWQPLTVQSECPVTLKDVSDL", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_415182.1" + ], + [ + "gene_synonym", + "JW0644" + ], + [ + "gene_synonym", + "b0649" + ], + [ + "gene_synonym", + "hscD" + ], + [ + "gene_synonym", + "ybeV" + ], + [ + "gene_synonym", + "ECK0642" + ], + [ + "gene_synonym", + "EcoGene:EG13652" + ], + [ + "gene_synonym", + "GeneID:945253" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77359" + ], + [ + "gene_synonym", + "GI:16128632" + ], + [ + "gene_synonym", + "ASAP:ABE-0002222" + ], + [ + "gene_synonym", + "djlC" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P77319" + ], + [ + "gene_synonym", + "GI:16128633" + ], + [ + "gene_synonym", + "ybeW" + ], + [ + "gene_synonym", + "NP_415183.1" + ], + [ + "gene_synonym", + "b0650" + ], + [ + "gene_synonym", + "ECK0643" + ], + [ + "gene_synonym", + "GeneID:945218" + ], + [ + "gene_synonym", + "EcoGene:EG13653" + ], + [ + "gene_synonym", + "ASAP:ABE-0002225" + ] + ], + "dna_sequence": 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"ribonucleoside hydrolase 1" + ], + "id": "CDS_648", + "location": [ + [ + "NC_000913", + 684412, + "-", + 936 + ] + ], + "md5": "d96ee9e9cf2ba5fbe54ab75501f25c20", + "parent_gene": "", + "protein_md5": "bca159193309a168039dcaf318718843", + "protein_translation": "MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTVVDYYYLTGNKPNATVMVDVDRQGFVDLLADRLKFYA", + "protein_translation_length": 311, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG12663" + ], + [ + "gene_synonym", + "JW0647" + ], + [ + "gene_synonym", + "ASAP:ABE-0002232" + ], + [ + "gene_synonym", + "ECK0645" + ], + [ + "gene_synonym", + "b0652" + ], + [ + "gene_synonym", + "gltL" + ], + [ + "gene_synonym", + "GI:16128635" + ], + [ + "gene_synonym", + "NP_415185.1" + ], + [ + "gene_synonym", + "GeneID:945254" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAG3" + ] + ], + "dna_sequence": "ATGATTACCCTGAAAAATGTTTCAAAATGGTATGGTCACTTTCAGGTGCTGACCGACTGCTCAACCGAAGTGAAAAAAGGCGAAGTGGTGGTGGTTTGCGGCCCGTCTGGTTCCGGCAAATCAACGCTGATTAAAACCGTCAACGGCCTCGAACCGGTGCAGCAAGGTGAAATCACCGTCGATGGTATCGTGGTTAACGACAAGAAAACCGATCTGGCAAAGCTGCGTTCCCGCGTCGGGATGGTATTCCAGCATTTCGAGCTGTTCCCTCATCTGTCGATTATCGAAAACCTGACCCTGGCGCAGGTGAAAGTGCTTAAACGCGATAAAGCGCCGGCTCGTGAAAAAGCCCTGAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGCGCGTTGTGTATGGATCCTATTGCGATGCTGTTTGACGAACCGACATCGGCGCTGGATCCGGAGATGATCAACGAAGTACTGGACGTGATGGTGGAACTGGCGAACGAAGGAATGACCATGATGGTGGTGACCCACGAAATGGGCTTTGCCCGTAAAGTGGCGAATCGGGTGATCTTTATGGACGAGGGTAAAATTGTCGAAGACTCGCCGAAAGACGCTTTCTTCGATGATCCGAAATCGGACCGCGCAAAAGACTTCCTCGCGAAAATCCTGCATTAA", + "dna_sequence_length": 726, + "functions": [ + "glutamate/aspartate ABC transporter ATPase" + ], + "id": "CDS_649", + "location": [ + [ + "NC_000913", + 685255, + "-", + 726 + ] + ], + "md5": "57190cbdfc84107336444b3f50a28ed9", + "parent_gene": "", + "protein_md5": "38cdb0dacca0e9d5add18020d599e6ed", + "protein_translation": "MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQVKVLKRDKAPAREKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSPKDAFFDDPKSDRAKDFLAKILH", + "protein_translation_length": 241, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG12662" + ], + [ + "gene_synonym", + "ASAP:ABE-0002234" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AER5" + ], + [ + "gene_synonym", + "NP_415186.1" + ], + [ + "gene_synonym", + "b0653" + ], + [ + "gene_synonym", + "JW0648" + ], + [ + "gene_synonym", + "gltK" + ], + [ + "gene_synonym", + "GI:16128636" + ], + [ + "gene_synonym", + "GeneID:947354" + ], + [ + "gene_synonym", + "ECK0646" + ] + ], + "dna_sequence": 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"protein_translation": "MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA", + "protein_translation_length": 224, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG12661" + ], + [ + "gene_synonym", + "GeneID:945443" + ], + [ + "gene_synonym", + "ASAP:ABE-0002239" + ], + [ + "gene_synonym", + "NP_415187.1" + ], + [ + "gene_synonym", + "b0654" + ], + [ + "gene_synonym", + "JW0649" + ], + [ + "gene_synonym", + "gltJ" + ], + [ + "gene_synonym", + "ECK0647" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AER3" + ], + [ + "gene_synonym", + "GI:16128637" + ] + ], + "dna_sequence": "ATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAACACCACCTATCTTGGTTGGATCTGGAGTGGTTTTCAGGTGACGATCGCTTTGTCGATCTGCGCCTGGATTATCGCTTTCCTCGTCGGTTCATTTTTCGGCATTTTACGTACCGTTCCAAACCGTTTTCTCTCTGGTCTGGGTACGTTGTATGTCGAACTGTTCCGCAACGTGCCGTTGATTGTGCAATTCTTTACCTGGTATCTGGTGATCCCGGAGCTGCTGCCGGAGAAAATCGGCATGTGGTTTAAGGCCGAGCTGGATCCCAATATTCAGTTTTTCCTTTCATCCATGCTCTGCCTGGGGCTGTTTACCGCCGCCCGTGTTTGCGAACAGGTACGCGCCGCGATTCAGTCGCTGCCGCGAGGGCAAAAAAATGCCGCGCTGGCGATGGGCCTGACGCTACCGCAGGCTTATCGATACGTACTGCTGCCTAATGCTTATCGCGTTATCGTCCCGCCGATGACCTCAGAGATGATGAACCTGGTGAAAAACTCCGCCATCGCCTCGACTATCGGTCTGGTGGATATGGCGGCGCAGGCGGGTAAATTGCTCGATTACTCAGCCCATGCCTGGGAGTCGTTTACCGCCATTACGCTGGCGTATGTGTTGATTAACGCTTTTATCATGCTGGTGATGACGCTGGTTGAACGTAAAGTTCGCCTGCCTGGCAACATGGGGGGCAAATAA", + "dna_sequence_length": 741, + "functions": [ + "glutamate/aspartate ABC transporter permease" + ], + "id": "CDS_651", + "location": [ + [ + "NC_000913", + 686669, + "-", + 741 + ] + ], + "md5": "036a890280cc1e10e69343518476d420", + "parent_gene": "", + 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"UniProtKB/Swiss-Prot:P0CE51" + ] + ], + "dna_sequence": 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[ + "NC_000913", + 715412, + "+", + 495 + ] + ], + "md5": "ca45a24917b37f02ddb6f0757d0987f4", + "parent_gene": "", + "protein_md5": "03e199ebe2f334f0d0f1823488a834d9", + "protein_translation": "MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPFRCKTNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKAINTH", + "protein_translation_length": 164, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b0691" + ], + [ + "gene_synonym", + "ASAP:ABE-0002352" + ], + [ + "gene_synonym", + "EcoGene:EG11777" + ], + [ + "gene_synonym", + "ASAP:ABE-0002355" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37003" + ], + [ + "gene_synonym", + "ECK0678" + ], + [ + "gene_synonym", + "ybfG" + ], + [ + "gene_synonym", + "JW5094" + ], + [ + "gene_synonym", + "GeneID:945287" + ], + [ + "gene_synonym", + "ybfH" + ] + ], + "dna_sequence": 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"gene_synonym", + "UniProtKB/Swiss-Prot:P46121" + ], + [ + "gene_synonym", + "ECK4400" + ], + [ + "gene_synonym", + "ybfK" + ], + [ + "gene_synonym", + "EcoGene:EG12869" + ] + ], + "dna_sequence": "ATGCAGAAACCCTTACCAGTCAGGTGGCTGATAATACAAGGGTTAACAGAGAATGAGCACTGCGGAATACAGGCATATGCCTGTAATACAGAGAGTCAGGAAGACCTGTACGCTGAAGTGCCCTTAGTCGGTAGACTAACGGGCATTGAAGAAGTGAAAGTCGAAGCTATTGCGATGAGCAAACTTCATAATATGAGTTGTCCGCCTTATATGGGGCATAGTGCGGCTGTTATTTTCCATTTAATTTACCTTTCCTGA", + "dna_sequence_length": 258, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_681", + "location": [ + [ + "NC_000913", + 720583, + "+", + 258 + ] + ], + "md5": "55e9e7c5ebfa2c0a7dc8eb5914c2f0b9", + "parent_gene": "", + "protein_md5": "0bdd73c75df3d4518d75cc2b2f5c0de0", + "protein_translation": "MQKPLPVRWLIIQGLTENEHCGIQAYACNTESQEDLYAEVPLVGRLTGIEEVKVEAIAMSKLHNMSCPPYMGHSAAVIFHLIYLS", + "protein_translation_length": 85, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002366" + ], + [ + "gene_synonym", + "GeneID:945302" + ], + [ + "gene_synonym", + "ECK0682" + ], + [ + "gene_synonym", + "EcoGene:EG10517" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21866" + ], + [ + "gene_synonym", + "GI:16128670" + ], + [ + "gene_synonym", + "JW5096" + ], + [ + "gene_synonym", + "kdpE" + ], + [ + "gene_synonym", + "b0694" + ], + [ + "gene_synonym", + "NP_415222.1" + ] + ], + "dna_sequence": 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"protein_translation_length": 169, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16128683" + ], + [ + "gene_synonym", + "NP_415236.1" + ], + [ + "gene_synonym", + "phrB" + ], + [ + "gene_synonym", + "JW0698" + ], + [ + "gene_synonym", + "GeneID:947005" + ], + [ + "gene_synonym", + "b0708" + ], + [ + "gene_synonym", + "EcoGene:EG10736" + ], + [ + "gene_synonym", + "ASAP:ABE-0002417" + ], + [ + "gene_synonym", + "phr" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00914" + ], + [ + "gene_synonym", + "ECK0697" + ] + ], + "dna_sequence": 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792 + ] + ], + "md5": "0dc085370e7aa4177783b741f64c5c41", + "parent_gene": "", + "protein_md5": "8d4f5fd2e953748336a91be9d21b88fb", + "protein_translation": "MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKPYQSQLIGQHVTHVETRGKALLTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTILLYSASDIEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDENKHHGALFRFKVFHRDGEPCERCGSIIEKTTLSSRPFYWCPGCQH", + "protein_translation_length": 263, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:90111163" + ], + [ + "gene_synonym", + "ECK0704" + ], + [ + "gene_synonym", + "GeneID:945321" + ], + [ + "gene_synonym", + "EcoGene:EG13310" + ], + [ + "gene_synonym", + "ASAP:ABE-0002435" + ], + [ + "gene_synonym", + "NP_415243.4" + ], + [ + "gene_synonym", + "JW5097" + ], + [ + "gene_synonym", + "abrB" + ], + [ + "gene_synonym", + "b0715" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75747" + ], + [ + "gene_synonym", + "ybgN" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16128698" + ], + [ + "gene_synonym", + "JW0713" + ], + [ + "gene_synonym", + "EcoGene:EG10931" + ], + [ + "gene_synonym", + "b0723" + ], + [ + "gene_synonym", + "ASAP:ABE-0002466" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC41" + ], + [ + "gene_synonym", + "NP_415251.1" + ], + [ + "gene_synonym", + "sdhA" + ] + ], + "dna_sequence": 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"MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE", + "protein_translation_length": 933, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK0715" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFG6" + ], + [ + "gene_synonym", + "JW0716" + ], + [ + "gene_synonym", + "GI:16128702" + ], + [ + "gene_synonym", + "EcoGene:EG10980" + ], + [ + "gene_synonym", + "sucB" + ], + [ + "gene_synonym", + "b0727" + ], + [ + "gene_synonym", + "ASAP:ABE-0002480" + ], + [ + "gene_synonym", + "GeneID:945307" + ], + [ + "gene_synonym", + "NP_415255.1" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P0A836" + ], + [ + "gene_synonym", + "EcoGene:EG10981" + ], + [ + "gene_synonym", + "GI:16128703" + ], + [ + "gene_synonym", + "sucC" + ], + [ + "gene_synonym", + "ASAP:ABE-0002483" + ], + [ + "gene_synonym", + "b0728" + ] + ], + "dna_sequence": "ATGAACTTACATGAATATCAGGCAAAACAACTTTTTGCCCGCTATGGCTTACCAGCACCGGTGGGTTATGCCTGTACTACTCCGCGCGAAGCAGAAGAAGCCGCTTCAAAAATCGGTGCCGGTCCGTGGGTAGTGAAATGTCAGGTTCACGCTGGTGGCCGCGGTAAAGCGGGCGGTGTGAAAGTTGTAAACAGCAAAGAAGACATCCGTGCTTTTGCAGAAAACTGGCTGGGCAAGCGTCTGGTAACGTATCAAACAGATGCCAATGGCCAACCGGTTAACCAGATTCTGGTTGAAGCAGCGACCGATATCGCTAAAGAGCTGTATCTCGGTGCCGTTGTTGACCGTAGTTCCCGTCGTGTGGTCTTTATGGCCTCCACCGAAGGCGGCGTGGAAATCGAAAAAGTGGCGGAAGAAACTCCGCACCTGATCCATAAAGTTGCGCTTGATCCGCTGACTGGCCCGATGCCGTATCAGGGACGCGAGCTGGCGTTCAAACTGGGTCTGGAAGGTAAACTGGTTCAGCAGTTCACCAAAATCTTCATGGGCCTGGCGACCATTTTCCTGGAGCGCGACCTGGCGTTGATCGAAATCAACCCGCTGGTCATCACCAAACAGGGCGATCTGATTTGCCTCGACGGCAAACTGGGCGCTGACGGCAACGCACTGTTCCGCCAGCCTGATCTGCGCGAAATGCGTGACCAGTCGCAGGAAGATCCGCGTGAAGCACAGGCTGCACAGTGGGAACTGAACTACGTTGCGCTGGACGGTAACATCGGTTGTATGGTTAACGGCGCAGGTCTGGCGATGGGTACGATGGACATCGTTAAACTGCACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCATCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGACGGTATCATCGGCGCGGTAGCAGAAGTGGGTGTTAACGTACCGGTCGTGGTACGTCTGGAAGGTAACAACGCCGAACTCGGCGCGAAGAAACTGGCTGACAGCGGCCTGAATATTATTGCAGCAAAAGGTCTGACGGATGCAGCTCAGCAGGTTGTTGCCGCAGTGGAGGGGAAATAA", 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"GeneID:945314" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGE9" + ], + [ + "gene_synonym", + "ASAP:ABE-0002485" + ], + [ + "gene_synonym", + "sucD" + ], + [ + "gene_synonym", + "GI:16128704" + ], + [ + "gene_synonym", + "b0729" + ] + ], + "dna_sequence": "ATGTCCATTTTAATCGATAAAAACACCAAGGTTATCTGCCAGGGCTTTACCGGTAGCCAGGGGACTTTCCACTCAGAACAGGCCATTGCATACGGCACTAAAATGGTTGGCGGCGTAACCCCAGGTAAAGGCGGCACCACCCACCTCGGCCTGCCGGTGTTCAACACCGTGCGTGAAGCCGTTGCTGCCACTGGCGCTACCGCTTCTGTTATCTACGTACCAGCACCGTTCTGCAAAGACTCCATTCTGGAAGCCATCGACGCAGGCATCAAACTGATTATCACCATCACTGAAGGCATCCCGACGCTGGATATGCTGACCGTGAAAGTGAAGCTGGATGAAGCAGGCGTTCGTATGATCGGCCCGAACTGCCCAGGCGTTATCACTCCGGGTGAATGCAAAATCGGTATCCAGCCTGGTCACATTCACAAACCGGGTAAAGTGGGTATCGTTTCCCGTTCCGGTACACTGACCTATGAAGCGGTTAAACAGACCACGGATTACGGTTTCGGTCAGTCGACCTGTGTCGGTATCGGCGGTGACCCGATCCCGGGCTCTAACTTTATCGACATTCTCGAAATGTTCGAAAAAGATCCGCAGACCGAAGCGATCGTGATGATCGGTGAGATCGGCGGTAGCGCTGAAGAAGAAGCAGCTGCGTACATCAAAGAGCACGTTACCAAGCCAGTTGTGGGTTACATCGCTGGTGTGACTGCGCCGAAAGGCAAACGTATGGGCCACGCGGGTGCCATCATTGCCGGTGGGAAAGGGACTGCGGATGAGAAATTCGCTGCTCTGGAAGCCGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAA", + "dna_sequence_length": 870, + "functions": [ + "succinyl-CoA synthetase, NAD(P)-binding, alpha subunit" + ], + "id": "CDS_717", + "location": [ + [ + "NC_000913", + 764180, + "+", + 870 + ] + ], + "md5": "e0c4443ded091533b5070861b0c0882a", + "parent_gene": "", + "protein_md5": "952a12588809478949035bbbb8605308", + "protein_translation": "MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK", + "protein_translation_length": 289, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "mngR" + ], + [ + "gene_synonym", + "EcoGene:EG11109" + ], + [ + "gene_synonym", + "JW0719" + ], + [ + "gene_synonym", + "ASAP:ABE-0002487" + ], + [ + "gene_synonym", + "GI:16128705" + ], + [ + "gene_synonym", + "ECK0718" + ], + [ + "gene_synonym", + "NP_415258.1" + ], + [ + "gene_synonym", + "b0730" + ], + [ + "gene_synonym", + "ybgB" + ], + [ + "gene_synonym", + "farR" + ], + [ + "gene_synonym", + "GeneID:945371" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13669" + ] + ], + "dna_sequence": "ATGGGACACAAGCCCTTATACCGGCAGATTGCCGATCGCATTCGTGAACAAATTGCGCGTGGCGAGCTTAAACCTGGCGATGCGTTACCCACTGAATCAGCGCTACAAACAGAGTTTGGCGTCAGCCGGGTTACGGTGCGTCAGGCTTTGCGCCAGCTAGTCGAGCAGCAGATCCTCGAAAGCATTCAGGGCAGCGGGACTTACGTCAAAGAAGAGCGGGTCAATTACGATATTTTTCAGTTAACCAGTTTTGATGAAAAACTGTCGGACCGTCACGTCGATACACACAGTGAAGTTCTGATATTCGAAGTGATTCCGGCTGACGATTTTCTTCAGCAACAGCTACAAATCACCCCGCAGGATCGTGTGTGGCATGTGAAGCGCGTGCGCTATCGCAAGCAAAAGCCAATGGCGCTGGAAGAAACCTGGATGCCGCTTGCGTTGTTCCCGGATCTCACCTGGCAGGTCATGGAAAATTCGAAATATCACTTTATCGAAGAAGTGAAGAAAATGGTTATCGATCGTAGCGAACAGGAAATCATTCCTCTGATGCCAACCGAAGAGATGAGCCGTCTGCTTAATATCAGCCAGACAAAGCCGATTCTTGAAAAAGTATCGCGTGGATATTTAGTTGATGGTCGGGTGTTTGAATATAGCCGCAACGCTTTTAATACCGATGACTATAAATTTACCCTGATAGCGCAGCGAAAATCATCGCGATAA", + "dna_sequence_length": 723, + "functions": [ + "transcriptional repressor for the mannosyl-D-glycerate catabolic operon" + ], + "id": "CDS_718", + "location": [ + [ + "NC_000913", + 765875, + "-", + 723 + ] + ], + "md5": "6576c743d62157eefdbb2885ce2e0b4d", + "parent_gene": "", + "protein_md5": "ba79ccaf2c42986b22377382b12c8017", + "protein_translation": "MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIFEVIPADDFLQQQLQITPQDRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENSKYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEYSRNAFNTDDYKFTLIAQRKSSR", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "hrsA" + ], + [ + "gene_synonym", + "EcoGene:EG13235" + ], + [ + "gene_synonym", + "JW0720" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P54745" + ], + [ + "gene_synonym", + "ECK0719" + ], + [ + "gene_synonym", + "NP_415259.1" + ], + [ + "gene_synonym", + "b0731" + ], + [ + "gene_synonym", + "mngA" + ], + [ + "gene_synonym", + "GeneID:945355" + ], + [ + "gene_synonym", + "GI:16128706" + ], + [ + "gene_synonym", + "ASAP:ABE-0002493" + ] 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"ATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTCCAGTACTGAGCAATTTCTGGAAGAAGTGTATCGCCGTGAAAGCCTTGGCCCGACCGCCTTAGGTGAAGGGTTGGCTGTGCCGCATGGCAAAACTGCTGCGGTAAAAGAAGCGGCGTTTGCGGTCGCCACACTCAGCGAGCCGCTTCAGTGGGAAGGCGTTGATGGCCCGGAAGCAGTTGATTTAGTGGTGCTGCTGGCGATTCCCCCCAATGAAGCGGGTACTACGCATATGCAACTGCTGACAGCGCTGACCACGCGCCTTGCGGATGATGAGATTCGGGCGCGTATACAGTCGGCGACGACGCCTGATGAGTTGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGCAACCGCCTGTATTTTTGCGGCTGAAGTCGCCATCAAGGAGAGTGAGCGTTTTAATGGCATTCCCGCGCTTTCAGTGCCTGTTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCGGGCTGCTCGGAATTTTGATGGTACCGGTGCTCGCGGCCTATACCGCCTATTCTCTGGCAGATAAACCGGCGTTAGCGCCAGGCTTTGCGGCTGGACTTGCCGCCAACATGATCGGCTCCGGGTTTCTCGGCGCGGTCGTTGGCGGATTGATAGCCGGTTACTTGATGCGCTGGGTGAAAAATCACTTGCGTCTTAGCAGTAAATTCAATGGATTCCTGACTTTTTATCTCTACCCGGTGCTCGGTACGTTGGGAGCGGGCAGTCTGATGCTGTTTGTGGTGGGGGAACCTGTCGCCTGGATCAATAACTCGCTTACCGCCTGGCTGAACGGTCTGTCAGGAAGTAACGCGCTGTTGCTGGGTGCCATTCTCGGTTTTATGTGTTCCTTTGACCTTGGAGGGCCAGTGAATAAAGCCGCTTATGCATTCTGCCTGGGCGCAATGGCGAACGGCGTTTACGGCCCGTATGCCATTTTCGCCTCCGTCAAAATGGTTTCGGCATTTACCGTAACCGCTTCCACGATGCTCGCACCGCGCCTGTTTAAAGAGTTTGAAATTGAGACCGGGAAATCCACCTGGCTGTTAGGGCTGGCAGGTATTACCGAAGGGGCGATCCCGATGGCGATTGAAGATCCGCTGCGGGTTATTGGTTCGTTTGTGCTGGGCTCTATGGTAACGGGCGCTATTGTCGGTGCGATGAATATCGGCCTTTCGACACCCGGTGCCGGCATTTTCTCGCTCTTTTTACTTCATGATAATGGCGCGGGCGGTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAATTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAA", 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"gene_synonym", + "ECK0724" + ], + [ + "gene_synonym", + "ASAP:ABE-0002505" + ], + [ + "gene_synonym", + "b0735" + ], + [ + "gene_synonym", + "ybgE" + ], + [ + "gene_synonym", + "EcoGene:EG12395" + ], + [ + "gene_synonym", + "NP_415263.1" + ], + [ + "gene_synonym", + "GI:16128710" + ] + ], + "dna_sequence": "ATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTTTCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGGTGTGATTCACGGCGTGGGCTTTCGTCCGCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAA", + "dna_sequence_length": 294, + "functions": [ + "putative inner membrane protein in cydABX-ybgE operon" + ], + "id": "CDS_724", + "location": [ + [ + "NC_000913", + 774309, + "+", + 294 + ] + ], + "md5": "63f4236ac48bfcacc62de96050e7fa11", + "parent_gene": "", + "protein_md5": "1ed5362504934d484cbe923df0583e6c", + "protein_translation": 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"aliases": [ + [ + "gene_synonym", + "JW0737" + ], + [ + "gene_synonym", + "GeneID:945605" + ], + [ + "gene_synonym", + "ECK0743" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB91" + ], + [ + "gene_synonym", + "b0754" + ], + [ + "gene_synonym", + "ASAP:ABE-0002560" + ], + [ + "gene_synonym", + "EcoGene:EG10079" + ], + [ + "gene_synonym", + "aroG" + ], + [ + "gene_synonym", + "GI:16128722" + ], + [ + "gene_synonym", + "NP_415275.1" + ] + ], + "dna_sequence": 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"JW0738" + ], + [ + "gene_synonym", + "b0755" + ], + [ + "gene_synonym", + "ECK0744" + ], + [ + "gene_synonym", + "ASAP:ABE-0002563" + ], + [ + "gene_synonym", + "EcoGene:EG11699" + ], + [ + "gene_synonym", + "GI:16128723" + ], + [ + "gene_synonym", + "GeneID:945068" + ] + ], + "dna_sequence": "ATGGCTGTAACTAAGCTGGTTCTGGTTCGTCATGGCGAAAGTCAGTGGAACAAAGAAAACCGTTTCACCGGTTGGTACGACGTGGATCTGTCTGAGAAAGGCGTAAGCGAAGCAAAAGCAGCAGGTAAGCTGCTGAAAGAGGAAGGTTACAGCTTTGACTTTGCTTACACTTCTGTGCTGAAACGCGCTATCCATACCCTGTGGAATGTGCTGGACGAACTGGATCAGGCATGGCTGCCCGTTGAGAAATCCTGGAAACTGAACGAACGTCACTACGGTGCGTTGCAGGGTCTGAACAAAGCGGAAACTGCTGAAAAGTATGGCGACGAGCAGGTGAAACAGTGGCGTCGTGGTTTTGCAGTGACTCCGCCGGAACTGACTAAAGATGATGAGCGTTATCCGGGTCACGATCCGCGTTACGCGAAACTGAGCGAGAAAGAACTGCCGCTGACGGAAAGCCTGGCGCTGACCATTGACCGCGTGATCCCTTACTGGAATGAAACTATTCTGCCGCGTATGAAGAGCGGTGAGCGCGTGATCATCGCTGCACACGGTAACTCTTTACGTGCGCTGGTGAAATATCTTGATAACATGAGCGAAGAAGAGATTCTTGAGCTTAATATCCCGACTGGCGTGCCGCTGGTGTATGAGTTCGACGAGAATTTCAAACCGCTGAAACGCTATTATCTGGGTAATGCTGACGAGATCGCAGCGAAAGCAGCGGCGGTTGCAAACCAGGGTAAAGCGAAGTAA", + "dna_sequence_length": 753, + "functions": [ + "phosphoglyceromutase 1" + ], + "id": "CDS_737", + "location": [ + [ + "NC_000913", + 787595, + "-", + 753 + ] + ], + "md5": "053ad48aa5174ad090296fc8a3bb15bb", + "parent_gene": "", + "protein_md5": "b44f939266db7350d7326798f5f7f138", + "protein_translation": "MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDENFKPLKRYYLGNADEIAAKAAAVANQGKAK", + "protein_translation_length": 250, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW0739" + ], + [ + "gene_synonym", + "b0756" + ], + [ + "gene_synonym", + "ECK0745" + ], + [ + "gene_synonym", + "NP_415277.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9C3" + ], + [ + "gene_synonym", + "EcoGene:EG11698" + ], + [ + "gene_synonym", + "GeneID:944943" + ], + [ + "gene_synonym", + "ASAP:ABE-0002566" + ], + [ + "gene_synonym", + "galM" + ], + [ + "gene_synonym", + "GI:16128724" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "galA" + ], + [ + "gene_synonym", + "ASAP:ABE-0002568" + ], + [ + "gene_synonym", + "EcoGene:EG10363" + ], + [ + "gene_synonym", + "GeneID:945358" + ], + [ + "gene_synonym", + "GI:16128725" + ], + [ + "gene_synonym", + "galK" + ] + ], + "dna_sequence": 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"GeneID:945357" + ], + [ + "gene_synonym", + "JW0741" + ], + [ + "gene_synonym", + "galB" + ], + [ + "gene_synonym", + "EcoGene:EG10366" + ], + [ + "gene_synonym", + "GI:16128726" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09148" + ] + ], + "dna_sequence": 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"gene_synonym", + "ybhD" + ], + [ + "gene_synonym", + "ASAP:ABE-0002613" + ], + [ + "gene_synonym", + "JW5896" + ], + [ + "gene_synonym", + "GeneID:944869" + ] + ], + "dna_sequence": "ATGAAGCATGAATTATCAAGTATGAAGGCATTTGTCATACTGGCAGAGTCCAGTTCGTTTAACAATGCCGCTAAATTACTCAATATTACGCAACCTGCATTAACGCGAAGAATAAAAAAGATGGAGGAAGATTTACATGTTCAACTATTTGAGCGTACAACTCGCAAGGTTACGTTAACAAAAGCAGGAAAAAGGTTGCTCCCGGAGGCGCGGGAATTAATAAAGAAATTCGATGAAACGCTTTTTAATATTCGTGATATGAATGCTTATCATCGTGGTATGGTGACGTTAGCGTGTATTCCGACCGCAGTATTTTATTTTTTACCGCTGGCAATCGGTAAATTTAATGAGCTGTATCCCAATATTAAAGTGCGGATTCTGGAACAAGGCACGAATAATTGCATGGAATCGGTGCTGTGTAACGAATCAGACTTTGGCATAAACATGAACAACGTCACAAATTCATCCATTGATTTTACCCCACTGGTCAACGAGCCGTTCGTGCTGGCCTGTCGGCGTGACCATCCATTGGCCAAAAAGCAGCTTGTAGAATGGCAGGAGTTAGTGGGTTACAAAATGATTGGCGTACGCTCCTCCAGCGGCAACCGACTGTTGATAGAACAACAGCTGGCCGACAAGCCCTGGAAGCTGGACTGGTTTTACGAAGTGCGTCATCTTTCGACGTCATTAGGACTGGTGGAGGCGGGACTGGGGATTTCGGCGCTTCCTGGCCTGGCAATGCCTCATGCGCCCTATTCTTCGATTATTGGTATCCCATTGGTGGAACCCGTTATACGTCGAACATTGGGAATAATTCGCCGTAAAGATGCCGTACTTTCTCCAGCAGCAGAACGCTTTTTTGCCTTGCTGATTAATTTATGGACTGACGATAAAGACAATTTGTGGACCAATATCGTCGAACGCCAGAGACACGCGTTACAGGAGATAGGTTAA", + "dna_sequence_length": 954, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_750", + "location": [ + [ + "NC_000913", + 800575, + "-", + 954 + ] + ], + "md5": "daf6b3c9e038e425ac5d5bbe5de89176", + "parent_gene": "", + "protein_md5": "77bbcd0dc6af560cf8a35370040d69ac", + "protein_translation": "MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHVQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK0758" + ], + [ + "gene_synonym", + "GeneID:945375" + ], + [ + "gene_synonym", + "b0769" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAV8" + ], + [ + "gene_synonym", + "NP_415290.1" + ], + [ + "gene_synonym", + "JW0752" + ], + [ + "gene_synonym", + "ybhH" + ], + [ + "gene_synonym", + "ASAP:ABE-0002618" + ], + [ + "gene_synonym", + "GI:16128737" + ], + [ + "gene_synonym", + "EcoGene:EG13664" + ] + ], + "dna_sequence": "ATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAACCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGTAACGATCTGGAAATTGACGGTATTGGCGGCGGTAATCCACTGACCAGTAAAGTCGCCATTATTAGCCGTTCCAGCGATCCGCGTGCTGATGTCGATTATCTGTTTGCGCAGGTAATCGTTCATGAGCAACGTGTCGATACCACGCCTAACTGCGGCAATATGCTGTCTGGTGTTGGGGCATTCGCCATTGAAAATGGTTTGATTGCAGCGACTTCGCCAGTTACTCGCGTACGTATCCGCAACGTCAATACGGGTACGTTCATCGAAGCTGATGTGCAAACGCCAAATGGTGTTGTCGAGTACGAGGGTAGCGCCAGAATTGACGGCGTACCGGGTACTGCCGCACCGGTTGCGCTCACTTTCCTGAATGCCGCTGGAACCAAAACCGGAAAAGTTTTCCCGACTGATAATCAGATTGATTATTTTGACGATGTCCCGGTGACCTGTATCGATATGGCGATGCCAGTCGTCATTATTCCGGCTGAATATCTGGGAAAAACAGGTTATGAATTACCGGCGGAACTGGATGCCGACAAAGCATTATTAGCCCGCATTGAATCTATCCGTCTACAAGCGGGTAAAGCAATGGGCTTAGGTGATGTCAGTAATATGGTTATCCCTAAACCTGTGCTTATTTCTCCAGCGCAGAAAGGCGGGGCAATTAATGTGCGTTATTTTATGCCGCATTCTTGCCATCGCGCGCTGGCGATAACCGGTGCTATTGCTATTTCCAGTAGTTGTGCATTGGAAGGCACCGTCACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCAGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGA", 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[ + "gene_synonym", + "ybhI" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75763" + ], + [ + "gene_synonym", + "EcoGene:EG13665" + ], + [ + "gene_synonym", + "GeneID:945377" + ] + ], + "dna_sequence": "ATGAATAAGAAATCGTTATGGAAGCTAATTCTGATATTAGCGATCCCATGTATTATTGGTTTTATGCCAGCTCCGGCAGGATTAAGCGAACTGGCGTGGGTGCTTTTTGGTATTTACCTGGCGGCCATTGTGGGGCTGGTTATCAAGCCTTTCCCGGAACCTGTCGTACTGTTAATTGCCGTTGCTGCCTCAATGGTGGTGGTCGGTAACTTATCCGACGGTGCGTTTAAAACCACCGCCGTATTAAGCGGTTACTCTTCAGGTACCACCTGGCTGGTGTTCTCGGCGTTTACCTTAAGCGCCGCATTTGTGACCACCGGTTTAGGTAAACGTATTGCCTATCTGCTGATTGGTAAAATCGGTAACACCACGCTGGGTCTGGGTTACGTTACGGTATTCCTCGATCTGGTACTGGCTCCGGCAACACCGTCTAACACCGCGCGTGCGGGCGGCATTGTGTTACCGATCATCAACAGCGTGGCGGTGGCTTTGGGGTCCGAACCGGAAAAAAGTCCGCGTCGTGTCGGACATTACCTGATGATGTCCATTTACATGGTCACCAAAACCACCAGCTATATGTTCTTTACCGCAATGGCGGGGAACATTCTGGCGCTGAAAATGATCAACGACATTCTGCACCTGCAAATTAGCTGGGGTGGATGGGCGCTGGCAGCCGGATTGCCGGGCATCATTATGCTGCTGGTCACCCCGCTGGTGATTTACACCATGTATCCACCAGAAATTAAGAAGGTGGATAACAAAACCATCGCTAAAGCGGGCCTTGCCGAACTAGGACCGATGAAAATCCGCGAAAAAATGCTGCTCGGTGTCTTTGTGCTGGCGCTGCTGGGCTGGATTTTCAGTAAGTCTCTGGGGGTTGATGAATCCACCGTGGCAATCGTTGTTATGGCAACCATGCTGCTGCTGGGTATCGTTACCTGGGAAGACGTGGTTAAAAATAAAGGCGGCTGGAATACCTTAATCTGGTACGGCGGTATTATCGGCTTAAGCTCCTTATTATCGAAAGTTAAATTCTTCGAATGGTTAGCTGAAGTCTTTAAAAATAACCTGGCATTTGATGGTCACGGTAACGTTGCTTTCTTCGTTATTATTTTCCTCAGCATTATCGTGCGTTATTTCTTCGCTTCCGGTAGTGCCTATATCGTTGCTATGTTACCGGTATTTGCCATGCTGGCGAACGTCTCCGGCGCACCGTTAATGTTAACCGCGCTGGCACTGTTGTTCTCCAACTCCTATGGCGGCATGGTTACTCACTATGGCGGCGCGGCAGGTCCGGTCATCTTTGGCGTGGGTTATAACGATATTAAATCCTGGTGGTTGGTCGGTGCGGTACTGACGATATTAACCTTCCTGGTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAA", 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+ ], + [ + "gene_synonym", + "ybhJ" + ], + [ + "gene_synonym", + "b0771" + ], + [ + "gene_synonym", + "GeneID:945380" + ], + [ + "gene_synonym", + "ECK0760" + ], + [ + "gene_synonym", + "JW5103" + ], + [ + "gene_synonym", + "GI:90111167" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75764" + ], + [ + "gene_synonym", + "NP_415292.2" + ] + ], + "dna_sequence": 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"MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVSRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM", + "protein_translation_length": 753, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46130" + ], + [ + "gene_synonym", + "EcoGene:EG12875" + ], + [ + "gene_synonym", + "ASAP:ABE-0002629" + ], + [ + "gene_synonym", + "GI:16128740" + ], + [ + "gene_synonym", + "b0772" + ], + [ + "gene_synonym", + "ECK0761" + ], + [ + "gene_synonym", + "GeneID:945381" + ], + [ + "gene_synonym", + "JW0755" + ], + [ + "gene_synonym", + "NP_415293.1" + ], + [ + "gene_synonym", + "ybhC" + ] + ], + "dna_sequence": 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transferase" + ], + "id": "CDS_762", + "location": [ + [ + "NC_000913", + 816647, + "-", + 909 + ] + ], + "md5": "1139488a0cf4f67633bfac3b38859499", + "parent_gene": "", + "protein_md5": "1ecffde042eb451537578d672b06669e", + "protein_translation": "MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30745" + ], + [ + "gene_synonym", + "b0781" + ], + [ + "gene_synonym", + "GI:16128749" + ], + [ + "gene_synonym", + "chlA" + ], + [ + "gene_synonym", + "EcoGene:EG11595" + ], + [ + "gene_synonym", + "JW0764" + ], + [ + "gene_synonym", + "ECK0770" + ], + [ + "gene_synonym", + "moaA" + ], + [ + "gene_synonym", + 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"functions": [ + "UPF0104 family inner membrane protein" + ], + "id": "CDS_770", + "location": [ + [ + "NC_000913", + 822498, + "-", + 957 + ] + ], + "md5": "72824bb6a1f8e99c9b9d370b22210933", + "parent_gene": "", + "protein_md5": "ec3883b2b802d77e6dc8f349e24f9136", + "protein_translation": "MSKSHPRWRLAKKILTWLFFIAVIVLLVVYAKKVDWEEVWKVIRDYNRVALLSAVGLVVVSYLIYGCYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVDQTTLRILGIGLLMIIAVYLWFCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMVMGAIIWLLLGQSVNYFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGTIIAALLAYRVLYYFIPLLLALICYLLLESQAKKLRAKNEAAM", + "protein_translation_length": 318, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_415310.1" + ], + [ + "gene_synonym", + "b0789" + ], + [ + "gene_synonym", + "JW0772" + ], + [ + "gene_synonym", + "ybhO" + ], + [ + "gene_synonym", + "GI:16128757" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA84" + ], + [ + "gene_synonym", + "clsB" + ], + [ + "gene_synonym", + "ASAP:ABE-0002692" + ], + [ + "gene_synonym", + "ECK0778" + ], + [ + "gene_synonym", + "EcoGene:EG13671" + ], + [ + "gene_synonym", + "GeneID:945409" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P0AAW1" + ], + [ + "gene_synonym", + "EcoGene:EG13672" + ], + [ + "gene_synonym", + "ybhP" + ], + [ + "gene_synonym", + "ASAP:ABE-0002696" + ], + [ + "gene_synonym", + "NP_415311.1" + ], + [ + "gene_synonym", + "ECK0779" + ] + ], + "dna_sequence": 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"parent_gene": "", + "protein_md5": "7594e119ffe8456710f27d137885e84c", + "protein_translation": "MPDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALPLRTWRHLSDHAPLSAEIHL", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16128759" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAW5" + ], + [ + "gene_synonym", + "b0791" + ], + [ + "gene_synonym", + "ybhQ" + ], + [ + "gene_synonym", + "JW0774" + ], + [ + "gene_synonym", + "EcoGene:EG13673" + ], + [ + "gene_synonym", + "NP_415312.1" + ], + [ + "gene_synonym", + "GeneID:945405" + ], + [ + "gene_synonym", + "ASAP:ABE-0002699" + ], + [ + "gene_synonym", + "ECK0780" + ] + ], + "dna_sequence": 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"gene_synonym", + "b0792" + ], + [ + "gene_synonym", + "JW5803" + ], + [ + "gene_synonym", + "NP_415313.1" + ], + [ + "gene_synonym", + "EcoGene:EG13674" + ], + [ + "gene_synonym", + "ybhR" + ], + [ + "gene_synonym", + "GeneID:945403" + ], + [ + "gene_synonym", + "GI:16128760" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFP9" + ], + [ + "gene_synonym", + "ECK0781" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW0777" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFQ2" + ], + [ + "gene_synonym", + "ybhS" + ], + [ + "gene_synonym", + "ECK0782" + ], + [ + "gene_synonym", + "GI:16128761" + ] + ], + "dna_sequence": "ATGAGTAACCCGATCCTGTCCTGGCGTCGCGTACGGGCGCTGTGCGTTAAAGAGACGCGGCAGATCGTTCGCGATCCGAGTAGCTGGCTGATTGCGGTAGTGATCCCGCTGCTACTGCTGTTTATTTTTGGTTACGGCATTAACCTCGACTCCAGCAAGCTGCGGGTCGGGATTTTACTGGAACAGCGTAGCGAAGCGGCGCTGGATTTCACCCACACCATGACCGGTTCGCCCTACATCGACGCCACCATCAGCGATAACCGTCAGGAACTGATCGCCAAAATGCAGGCGGGGAAAATTCGCGGTCTGGTGGTTATTCCGGTGGATTTTGCGGAACAGATGGAGCGCGCCAACGCCACCGCACCGATTCAGGTGATCACCGACGGCAGTGAGCCGAATACCGCTAACTTTGTACAGGGGTATGTCGAAGGGATCTGGCAGATCTGGCAAATGCAGCGAGCGGAGGACAACGGGCAGACTTTTGAACCGCTTATTGATGTACAAACCCGCTACTGGTTTAACCCGGCGGCGATTAGCCAGCACTTCATTATCCCCGGTGCGGTGACCATTATCATGACGGTCATCGGCGCGATTCTCACCTCGCTGGTGGTGGCGCGAGAATGGGAACGCGGCACCATGGAGGCTCTGCTCTCTACGGAGATTACCCGCACGGAACTGCTGCTGTGTAAGCTGATCCCTTATTACTTTCTCGGGATGCTGGCGATGTTGCTGTGTATGCTGGTGTCAGTGTTTATTCTCGGCGTGCCGTATCGCGGGTCGCTGCTGATTCTGTTTTTTATCTCCAGCCTGTTTTTACTCAGTACCCTGGGGATGGGGCTGCTGATTTCCACGATTACCCGCAACCAGTTCAATGCCGCTCAGGTCGCCCTGAACGCCGCTTTTCTGCCGTCGATTATGCTTTCCGGCTTTATTTTTCAGATCGACAGTATGCCCGCGGTGATCCGCGCGGTGACGTACATTATTCCCGCTCGTTATTTCGTCAGCACCCTGCAAAGCCTGTTCCTCGCCGGGAATATTCCAGTGGTGCTGGTGGTAAACGTGCTGTTTTTGATCGCTTCGGCGGTGATGTTTATCGGCCTGACGTGGCTGAAAACCAAACGTCGGCTGGATTAG", 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"GeneID:945413" + ], + [ + "gene_synonym", + "JW5104" + ], + [ + "gene_synonym", + "NP_415315.4" + ], + [ + "gene_synonym", + "GI:90111168" + ], + [ + "gene_synonym", + "ybhF" + ], + [ + "gene_synonym", + "ECK0783" + ] + ], + "dna_sequence": 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"MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK0800" + ], + [ + "gene_synonym", + "JW0796" + ], + [ + "gene_synonym", + "glnH" + ], + [ + "gene_synonym", + "b0811" + ], + [ + "gene_synonym", + "GeneID:944872" + ], + [ + "gene_synonym", + "NP_415332.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0002771" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEQ3" + ], + [ + "gene_synonym", + "EcoGene:EG10386" + ], + [ + "gene_synonym", + "GI:16128779" + ] + ], + "dna_sequence": 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"MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKMGGFNLKYRYEEDNSPLGVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASIYGVVGVGYGKFQTTEYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDVGTWIAGVGYRF", + "protein_translation_length": 171, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ybiP" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75785" + ], + [ + "gene_synonym", + "ECK0804" + ], + [ + "gene_synonym", + "JW0800" + ], + [ + "gene_synonym", + "NP_415336.1" + ], + [ + "gene_synonym", + "b0815" + ], + [ + "gene_synonym", + "EcoGene:EG13321" + ], + [ + "gene_synonym", + "opgE" + ], + [ + "gene_synonym", + "GI:16128783" + ], + [ + "gene_synonym", + "GeneID:945360" + ], + [ + "gene_synonym", + "ASAP:ABE-0002786" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG13472" + ], + [ + "gene_synonym", + "gsiA" + ], + [ + "gene_synonym", + "JW5897" + ], + [ + "gene_synonym", + "ASAP:ABE-0002830" + ] + ], + "dna_sequence": 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"CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b0830" + ], + [ + "gene_synonym", + "GeneID:945459" + ], + [ + "gene_synonym", + "ECK0820" + ], + [ + "gene_synonym", + "gsiB" + ], + [ + "gene_synonym", + "GI:16128798" + ], + [ + "gene_synonym", + "NP_415351.1" + ], + [ + "gene_synonym", + "yliB" + ], + [ + "gene_synonym", + "EcoGene:EG13473" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75797" + ], + [ + "gene_synonym", + "JW5111" + ], + [ + "gene_synonym", + "ASAP:ABE-0002832" + ] + ], + "dna_sequence": "ATGGCAAGAGCTGTACACCGTAGTGGGTTAGTGGCGCTGGGCATTGCGACAGCGTTGATGGCATCTTGTGCATTCGCTGCCAAAGATGTGGTGGTGGCGGTAGGATCGAATTTCACCACGCTCGATCCGTATGACGCAAATGACACGTTATCTCAGGCCGTAGCGAAATCGTTTTACCAGGGGCTGTTCGGTCTGGATAAAGAGATGAAACTGAAAAACGTGCTGGCGGAGAGTTATACCGTTTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATTCCAGGATGGCACCGATTTCAACGCCGCGGCGGTGAAAGCGAATCTGGACCGGGCCAGCGATCCGGCGAATCATCTTAAACGCTATAACCTGTATAAGAATATTGCTAAAACGGAAGCGATCGATCCGACAACGGTAAAGATTACCCTCAAACAGCCGTTCTCAGCGTTTATTAATATTCTTGCCCATCCGGCGACCGCGATGATTTCACCGGCAGCGCTGGAAAAATATGGCAAGGAGATTGGTTTTTATCCGGTGGGAACCGGACCGTATGAACTGGATACCTGGAATCAGACCGATTTTGTGAAGGTGAAAAAATTCGCGGGTTACTGGCAGCCAGGATTGCCCAAACTGGACAGCATAACCTGGCGTCCGGTGGCGGATAACAACACCCGCGCGGCAATGCTGCAAACCGGTGAAGCGCAGTTTGCTTTCCCCATTCCTTACGAGCAGGCCACACTGCTGGAGAAAAACAAAAATATCGAGTTGATGGCCAGTCCGTCAATTATGCAGCGTTATATCAGTATGAACGTGACGCAAAAGCCGTTCGATAACCCGAAGGTCCGTGAGGCGCTGAATTACGCCATTAACCGTCCGGCGCTGGTGAAAGTTGCCTTTGCGGGCTATGCAACGCCAGCTACTGGTGTGGTACCGCCAAGTATCGCCTACGCGCAAAGTTATAAACCGTGGCCTTACGATCCAGTGAAAGCGCGCGAATTACTGAAAGAGGCGGGATATCCCAACGGTTTCAGTACCACGCTGTGGTCGTCACATAACCACAGCACCGCGCAGAAAGTGCTGCAATTTACCCAGCAGCAGTTAGCGCAGGTCGGGATTAAAGCCCAGGTGACTGCGATGGATGCCGGACAGCGGGCGGCAGAAGTTGAAGGTAAAGGGCAAAAAGAGAGCGGCGTGCGGATGTTCTACACTGGCTGGTCGGCTTCAACCGGCGAAGCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCACACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAA", + "dna_sequence_length": 1539, + "functions": [ + "glutathione ABC transporter periplasmic binding protein" + ], + "id": "CDS_812", + "location": [ + [ + "NC_000913", + 869411, + "+", + 1539 + ] + ], + "md5": "98574d6028c3baf630881a35d9e99c30", + "parent_gene": "", + "protein_md5": "15e6565cfd76f124386d3ae2744c50dd", + "protein_translation": "MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGTDFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAMISPAALEKYGKEIGFYPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAAMLQTGEAQFAFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVTQKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEVEGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFEDADLQ", + "protein_translation_length": 512, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75798" + ], + [ + "gene_synonym", + "b0831" + ], + [ + "gene_synonym", + "GeneID:945460" + ], + [ + "gene_synonym", + "ECK0821" + ], + [ + "gene_synonym", + "GI:16128799" + ], + [ + "gene_synonym", + "yliC" + ], + [ + "gene_synonym", + "EcoGene:EG13474" + ], + [ + "gene_synonym", + "gsiC" + ], + [ + "gene_synonym", + "NP_415352.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0002834" + ], + [ + "gene_synonym", + "JW0815" + ] + ], + "dna_sequence": "ATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGAACTGGTGCGTCAGCAGCTGGGGTTGGATCAGCCGCTGTATCACCAGTTCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGACTCCGTAGAAATGCGTGATTACCCGGTGATTCAGGCGGAAATTCTGCTTTTCTCGCTGGAATTTATTCTTATCAACTTAGTGGTGGATGTGCTTTACGCCGCCATTAACCCGGCTATCAGGTACAAGTAA", + "dna_sequence_length": 921, + "functions": [ + "glutathione ABC transporter permease" + ], + "id": "CDS_813", + "location": [ + [ + "NC_000913", + 870967, + "+", + 921 + ] + ], + "md5": "d65f0b0a9a03744b71dcc28ebf60d53d", + "parent_gene": "", + "protein_md5": "c46426c216e7cf06b47dab106a168a78", + "protein_translation": "MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEADAQVIELVRQQLGLDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLTITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELGWLPTVGADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLFSLEFILINLVVDVLYAAINPAIRYK", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b0832" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75799" + ], + [ + "gene_synonym", + "GI:16128800" + ], + [ + "gene_synonym", + "ECK0822" + ], + [ + "gene_synonym", + "GeneID:945461" + ], + [ + "gene_synonym", + "gsiD" + ], + [ + "gene_synonym", + "yliD" + ], + [ + "gene_synonym", + "EcoGene:EG13475" + ], + [ + "gene_synonym", + "ASAP:ABE-0002836" + ], + [ + "gene_synonym", + "NP_415353.1" + ], + [ + "gene_synonym", + "JW0816" + ] + ], + "dna_sequence": "ATGCGACTATTTAACTGGCGACGTCAGGCGGTGTTAAACGCCATGCCACTGGTCAAACCTGACCAGGTACGTACACCGTGGCATGAATTCTGGCGACGATTTCGCCGTCAGCATATGGCGATGACCGCCGCATTATTCGTTATTTTATTGATTGTGGTGGCCATTTTTGCACGCTGGATCGCTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTGCGGCGATCGGGACGTTGCTGGGCTTGCTCGCTGGATATTATGAAGGCTGGTGGGATCGGCTGATCATGCGCATTTGCGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGTTTTTCACCATGCGCATTGGTACCTCGATTATCTCTGCCGCCAGCCTCTCATTTCTCGGCCTCGGTGCGCAGCCGCCGACACCAGAGTGGGGAGCAATGCTCAATGAGGCTCGAGCGGATATGGTTATCGCGCCGCATGTCGCTGTTTTTCCGGCCCTGGCTATTTTTCTGACCGTACTGGCGTTCAATTTGTTGGGCGATGGTTTACGCGATGCGCTGGATCCGAAAATTAAAGGATAG", + "dna_sequence_length": 912, + "functions": [ + "glutathione ABC transporter permease" + ], + "id": "CDS_814", + "location": [ + [ + "NC_000913", + 871890, + "+", + 912 + ] + ], + "md5": "dac970ee889cbc3ec52c07cc8361c711", + "parent_gene": "", + "protein_md5": "235a1842601e3ba0e8f9ca8893f2ddbe", + "protein_translation": "MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAALFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVLGSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTVLLRHILPGTVSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPALAIFLTVLAFNLLGDGLRDALDPKIKG", + "protein_translation_length": 303, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b0833" + ], + [ + "gene_synonym", + "GI:16128801" + ], + [ + "gene_synonym", + "EcoGene:EG13476" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75800" + ], + [ + "gene_synonym", + "ECK0823" + ], + [ + "gene_synonym", + "GeneID:945462" + ], + [ + "gene_synonym", + "NP_415354.1" + ], + [ + "gene_synonym", + "yliE" + ], + [ + "gene_synonym", + "ASAP:ABE-0002839" + ], + [ + "gene_synonym", + "JW0817" + ] + ], + "dna_sequence": "ATGCTGAGTTTATACGAAAAGATAAAGATAAGGCTGATAATTTTATTTTTATTGGCAGCACTGTCATTTATTGGTCTTTTTTTCATCATTAACTATCAACTGGTATCGGAGCGCGCGGTAAAACGTGCCGATAGCCGCTTTGAACTTATTCAGAAAAACGTTGGCTATTTCTTTAAAGATATTGAACGTTCGGCCCTGACATTAAAGGACTCACTGTATTTATTAAAAAATACAGAGGAGATTCAACGCGCCGTGATTCTTAAAATGGAAATGATGCCATTTTTAGACTCGGTGGGACTGGTACTTGATGATAATAAATATTATCTTTTTTCGCGGAGGGCGAATGATAAAATCGTTGTTTATCATCAGGAACAAGTAAATGGACCGCTTGTCGACGAGTCAGGGCGGGTTATTTTTGCCGATTTTAACCCATCGAAACGACCGTGGTCGGTGGCTTCAGATGACTCTAACAACAGCTGGAATCCGGCATACAATTGCTTTGATCGTCCGGGTAAAAAATGTATCTCTTTTACGCTACACATCAACGGCAAAGATCACGATTTGTTAGCGGTGGATAAAATTCATGTCGATTTAAACTGGCGATATCTGAACGAGTATCTTGATCAAATCAGCGCTAATGATGAAGTTCTATTTTTGAAACAAGGCCATGAGATCATTGCCAAGAATCAACTCGCTCGTGAAAAACTGATTATTTATAATAGCGAAGGTAATTATAATATTATTGATTCTGTCGATACTGAATATATCGAAAAAACATCAGCGGTGCCAAACAACGCATTATTCGAAATCTATTTTTATTATCCTGGCGGTAATTTATTGAACGCATCAGATAAACTTTTTTATCTGCCGTTTGCGTTCATTATTATCGTATTGCTGGTGGTTTATTTAATGACCACTCGTGTGTTCCGTCGGCAATTTTCTGAAATGACAGAGCTGGTTAATACGCTGGCGTTTTTGCCTGACTCAACGGATCAAATCGAGGCTCTGAAAATTCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGCTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGGATCATCAAACTGTGTGGTCTGGAAGCCGTGGAAGCGGTGTTTGGTGTTGATGAGCGCAATAAAATCGTCAGGAAATTGTGTCAGCGAATTGCCGAGAAATATGCGCAATGCTGCGATATCGTGACATTCAATGCCGATCTCTATTTACTTCTGTGTCGGGAAAATGTACAGACATTTACCCGTAAAATAGCGATGGTAAACGATTTTGACAGCAGCTTTGGCTACCGCAATCTGCGCATCCATAAGTCTGCCATTTGTGAACCTTTGCAGGGGGAAAACGCCTGGAGTTACGCAGAAAAACTGAAACTGGCGATTTCCAGTATCCGTGACCATATGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATCGTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCGGGTTTATCAATGAGCTGGGTTATCAGATTATTAAAACGGCAATGGGTGAATTCAGACATTTTAGTCAGCGTGCGTCGCTGAAGGATGATTTCTTACTGCATATTAATGTTTCGCCCTGGCAGTTAAACGAACCACACTTTCATGAGCGTTTTACCACCATCATGAAAGAAAATGGCCTGAAGGCGAACAGCCTCTGTGTTGAGATCACTGAAACCGTGATCGAGCGAATTAATGAACATTTTTATCTCAATATTGAACAACTGCGTAAACAAGGGGTACGGATATCGATTGATGACTTTGGCACCGGTTTGTCAAACCTGAAACGTTTTTATGAAATTAATCCAGACAGCATAAAGGTGGACTCGCAATTCACCGGCGATATTTTCGGTACTGCGGGAAAAATTGTGCGCATTATTTTCGACCTGGCACGCTATAACCGGATCCCGGTGATTGCGGAAGGCGTAGAGAGCGAAGACGTTGCGCGCGAATTAATCAAATTAGGATGTGTTCAGGCTCAGGGGTATCTGTACCAGAAACCCATGCCATTCTCCGCCTGGGATAAAAGTGGAAAATTAGTAAAAGAGTAG", + "dna_sequence_length": 2349, + "functions": [ + "putative membrane-anchored cyclic-di-GMP phosphodiesterase" + ], + "id": "CDS_815", + "location": [ + [ + "NC_000913", + 872979, + "+", + 2349 + ] + ], + "md5": "00e2c8de7d0fa4f6051c9cf6ae3fd025", + "parent_gene": "", + "protein_md5": "7459e01a0804156fd16dc4fece0d625a", + "protein_translation": "MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKDIERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE", + "protein_translation_length": 782, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75801" + ], + [ + "gene_synonym", + "NP_415355.1" + ], + [ + "gene_synonym", + "b0834" + ], + [ + "gene_synonym", + "GI:16128802" + ], + [ + "gene_synonym", + "GeneID:945463" + ], + [ + "gene_synonym", + "EcoGene:EG13477" + ], + [ + "gene_synonym", + "ECK0824" + ], + [ + "gene_synonym", + "JW0818" + ], + [ + "gene_synonym", + "yliF" + ], + [ + "gene_synonym", + "ASAP:ABE-0002841" + ] + ], + "dna_sequence": 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"ATGAAAAAAATTGCCATCACCTGTGCATTACTCTCAAGCTTAGTAGCAAGCAGCGTTTGGGCTGATGCCGCAAGCGATCTGAAAAGCCGCCTGGATAAAGTCAGCAGCTTCCACGCCAGCTTCACACAAAAAGTGACTGACGGTAGCGGCGCGGCGGTGCAGGAAGGTCAGGGCGATCTGTGGGTGAAACGTCCAAACTTATTCAACTGGCATATGACACAACCTGATGAAAGCATTCTGGTTTCTGACGGTAAAACACTGTGGTTCTATAACCCGTTCGTTGAGCAAGCTACGGCAACCTGGCTGAAAGATGCCACCGGTAATACGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATGGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAGCAGTTCACCATTAACGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAG", + "dna_sequence_length": 612, + "functions": [ + "lipoprotein chaperone" + ], + "id": "CDS_872", + "location": [ + [ + "NC_000913", + 937372, + "+", + 612 + ] + ], + "md5": "342dcb8026c7b9e855223803b8f10b48", + "parent_gene": "", + "protein_md5": "abc501f5c77c7a30b01513b7fa11f8ce", + "protein_translation": "MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK", + "protein_translation_length": 203, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "rarA" + ], + [ + "gene_synonym", + "ycaJ" + ], + [ + "gene_synonym", + "JW0875" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAZ4" + ], + [ + "gene_synonym", + "ECK0883" + ], + [ + "gene_synonym", + "EcoGene:EG12690" + ], + [ + "gene_synonym", + "b0892" + ], + [ + "gene_synonym", + "ASAP:ABE-0003034" + ], + [ + "gene_synonym", + "GeneID:945505" + ], + [ + "gene_synonym", + "mgsA" + ], + [ + "gene_synonym", + "NP_415412.1" + ], + [ + "gene_synonym", + "GI:16128859" + ] + ], + "dna_sequence": "GTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTGATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGTTCACCGTTTCAACAAAAGCCAGCAGGATGCATTTCTGCCACATATTGAAGACGGCACCATCACTTTTATTGGCGCAACCACTGAAAACCCGTCGTTTGAGCTTAATTCGGCACTGCTTTCCCGTGCCCGTGTCTATCTGTTGAAATCCCTGAGTACAGAGGATATTGAGCAAGTACTAACTCAGGCGATGGAAGACAAAACCCGTGGCTATGGTGGTCAGGATATTGTTCTGCCAGATGAAACACGACGCGCCATTGCTGAACTGGTGAATGGCGACGCGCGCCGGGCGTTAAATACGCTGGAAATGATGGCGGATATGGCCGAAGTCGATGATAGCGGTAAGCGGGTCCTGAAGCCTGAATTACTGACCGAAATCGCCGGTGAACGTAGCGCCCGCTTTGATAACAAAGGCGATCGCTTTTACGATCTGATTTCCGCACTGCATAAGTCGGTACGTGGTAGCGCACCCGATGCGGCGCTGTACTGGTATGCGCGAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTACTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTCGCGAACGCCCGGATTATGACGTGCCGGTTCATTTGCGTAATGCGCCGACGAAATTAATGAAGGAAATGGGCTACGGGCAGGAATATCGTTACGCTCATGATGAAGCAAACGCTTATGCTGCCGGTGAGGTTTACTTCCCGCCGGAAATAGCACAAACACGCTATTATTTCCCGACAAACAGGGGCCTTGAAGGCAAGATTGGCGAAAAGCTCGCCTGGCTGGCTGAACAGGATCAAAATAGCCCCATAAAACGCTACCGTTAA", 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"gene_synonym", + "ECK0884" + ], + [ + "gene_synonym", + "b0893" + ], + [ + "gene_synonym", + "ASAP:ABE-0003038" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8L1" + ], + [ + "gene_synonym", + "EcoGene:EG10947" + ], + [ + "gene_synonym", + "NP_415413.1" + ], + [ + "gene_synonym", + "GI:16128860" + ] + ], + "dna_sequence": 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"ECK0885" + ], + [ + "gene_synonym", + "ASAP:ABE-0003044" + ], + [ + "gene_synonym", + "EcoGene:EG10232" + ], + [ + "gene_synonym", + "b0894" + ], + [ + "gene_synonym", + "dmsA" + ], + [ + "gene_synonym", + "GI:90111183" + ], + [ + "gene_synonym", + "JW5118" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_415415.1" + ], + [ + "gene_synonym", + "ECK0886" + ], + [ + "gene_synonym", + "GeneID:945507" + ], + [ + "gene_synonym", + "EcoGene:EG10233" + ], + [ + "gene_synonym", + "b0895" + ], + [ + "gene_synonym", + "dmsB" + ], + [ + "gene_synonym", + "GI:16128862" + ], + [ + "gene_synonym", + "ASAP:ABE-0003046" + ] + ], + "dna_sequence": "ATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCAAAACCTGCGAGCTGGCCTGTAAAGACTACAAAGATTTGACGCCAGAAGTCAGCTTCCGCCGCATTTATGAATATGCTGGCGGCGACTGGCAGGAAGATAACGGTGTCTGGCACCAGAACGTGTTTGCCTACTATCTGTCGATTTCATGTAACCACTGCGAAGATCCGGCTTGTACTAAAGTCTGCCCGAGCGGTGCGATGCATAAACGTGAAGATGGTTTTGTTGTGGTCGATGAAGATGTGTGCATTGGCTGCCGCTACTGCCATATGGCTTGCCCGTATGGCGCACCGCAATATAACGAAACGAAAGGCCATATGACCAAATGCGATGGTTGTTATGACCGTGTTGCGGAGGGTAAAAAGCCGATCTGTGTTGAATCTTGTCCGCTGCGGGCGCTGGATTTCGGCCCTATCGACGAGCTGCGTAAAAAACATGGCGATCTGGCGGCCGTTGCGCCGTTGCCGCGAGCTCACTTTACCAAACCGAATATTGTGATCAAACCCAATGCCAATAGCCGCCCGACCGGGGATACCACTGGCTATCTGGCAAACCCGAAGGAGGTGTGA", + "dna_sequence_length": 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"gene_synonym", + "ECK0890" + ], + [ + "gene_synonym", + "NP_415419.2" + ], + [ + "gene_synonym", + "b0899" + ], + [ + "gene_synonym", + "GI:90111184" + ], + [ + "gene_synonym", + "ASAP:ABE-0003058" + ], + [ + "gene_synonym", + "JW5119" + ] + ], + "dna_sequence": 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regulator" + ], + "id": "CDS_881", + "location": [ + [ + "NC_000913", + 949568, + "-", + 909 + ] + ], + "md5": "3aa8ad6cad0d58ffc44785e0ef51441d", + "parent_gene": "", + "protein_md5": "357aced78900dc6ca3132390a7ae1e35", + "protein_translation": "MRMNMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQRLKIRLFNRTTRSVSLTEAGSNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINAARVAARIFLMSLLVGFTREYPDIKVELTTDDSLVDIVQQGFDAGVRLSCIVEKDMISVAIGPPVKLCVAATPEYFARYGKPRHPHDLLNHQCVVFRYPSGKPFHWQFAKELEIAVAGNIILDDVDAELEAVLMGAGIGYLLYEQIKEYLDTGRLECVLEDWSTERPGFQIYYPNRQYMSCGLRAFLDYVKTGQICQSQRHRPQ", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:945520" + ], + [ + "gene_synonym", + "b0901" + ], + [ + "gene_synonym", + "ycaK" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43340" + ], + [ + "gene_synonym", + "ECK0892" + ], + [ + "gene_synonym", + "JW0884" + ], + [ + "gene_synonym", + "NP_415421.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0003065" + ], + [ + "gene_synonym", + 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"protein_translation": "MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYRRNFNPVMTPEDEPDWKNMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYIDRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIEDADVTFLCNTVVFDGEELHASYYQSLLSQVRDMVDAL", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_415422.1" + ], + [ + "gene_synonym", + "ECK0893" + ], + [ + "gene_synonym", + "JW0885" + ], + [ + "gene_synonym", + "GeneID:945517" + ], + [ + "gene_synonym", + "pflA" + ], + [ + "gene_synonym", + "b0902" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9N4" + ], + [ + "gene_synonym", + "GI:16128869" + ], + [ + "gene_synonym", + "act" + ], + [ + "gene_synonym", + "EcoGene:EG10028" + ], + [ + "gene_synonym", + "ASAP:ABE-0003068" + ] + ], + "dna_sequence": 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"-", + 858 + ] + ], + "md5": "41a0da1fa3bd16289cabff1135b7ec1b", + "parent_gene": "", + "protein_md5": "7aa777189b5ba6c32d0c25be72bd0662", + "protein_translation": "MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVFISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLRENDHH", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ycaO" + ], + [ + "gene_synonym", + "GeneID:945509" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75838" + ], + [ + "gene_synonym", + "JW0888" + ], + [ + "gene_synonym", + "EcoGene:EG13699" + ], + [ + "gene_synonym", + "NP_415425.4" + ], + [ + "gene_synonym", + "ECK0896" + ], + [ + "gene_synonym", + "b0905" + ], + [ + "gene_synonym", + "GI:90111185" + ], + [ + "gene_synonym", + "ASAP:ABE-0003081" + ] + ], + "dna_sequence": 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"NP_415428.1" + ], + [ + "gene_synonym", + "EcoGene:EG10073" + ], + [ + "gene_synonym", + "aroA" + ], + [ + "gene_synonym", + "GI:16128875" + ], + [ + "gene_synonym", + "b0908" + ], + [ + "gene_synonym", + "ASAP:ABE-0003095" + ] + ], + "dna_sequence": 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"bbf5f34fe903483125d29ab15be37248", + "protein_translation": "MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNHAFLMDFQEYLEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYLYLSPERLANEGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLNRLRRLGMVWFMGHDSSKFRITESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQLNDETEENQPDSGEEE", + "protein_translation_length": 234, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK0915" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22523" + ], + [ + "gene_synonym", + "NP_415444.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0003138" + ], + [ + "gene_synonym", + "mukB" + ], + [ + "gene_synonym", + "GI:16128891" + ], + [ + "gene_synonym", + "EcoGene:EG10618" + ], + [ + "gene_synonym", + "b0924" + ], + [ + "gene_synonym", + "JW0907" + ], + [ + "gene_synonym", + "GeneID:945549" + ] + ], + "dna_sequence": "ATGATTGAACGCGGTAAATTTCGCTCACTGACGCTGATTAACTGGAACGGCTTTTTTGCCCGAACTTTTGACCTTGACGAGCTGGTCACGACGCTTTCTGGCGGTAACGGGGCGGGTAAATCCACCACCATGGCGGCGTTCGTTACGGCGCTGATCCCCGACCTGACCCTGCTGCATTTCCGTAACACTACGGAAGCCGGGGCCACCAGCGGTTCGCGCGATAAAGGTCTGCACGGTAAGCTGAAAGCGGGTGTCTGTTATTCGATGCTCGACACCATTAACTCGCGCCACCAGCGCGTGGTGGTCGGTGTGCGTCTGCAACAGGTTGCCGGACGCGATCGTAAAGTGGATATCAAGCCGTTTGCCATTCAGGGACTGCCGATGTCGGTGCAGCCGACACAGCTGGTGACCGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACAGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAATTCTATCGTCTGATCGAAGCTTCGCTGTATGGCGGGATCTCCAGTGCCATTACCCGTTCTCTGCGCGACTACCTGTTGCCAGAAAACAGCGGCGTGCGTAAAGCGTTCCAGGACATGGAAGCGGCGCTGCGTGAAAACCGTATGACGCTGGAAGCGATTCGTGTCACCCAGTCGGACCGCGACCTGTTTAAGCATCTGATCAGCGAAGCCACCAACTACGTGGCGGCGGACTACATGCGTCACGCCAACGAGCGCCGTGTCCATCTCGACAAAGCCCTGGAGTTTCGTCGCGAGCTACATACTTCGCGTCAGCAACTGGCGGCTGAGCAGTACAAACACGTCGATATGGCGCGTGAGCTGGCAGAGCACAACGGTGCCGAAGGCGATCTGGAAGCGGATTATCAGGCGGCCAGTGATCACCTGAACCTGGTGCAAACCGCACTGCGTCAGCAGGAGAAGATCGAACGCTACGAAGCGGATCTCGATGAGCTGCAGATCCGTCTGGAAGAGCAAAATGAAGTGGTGGCAGAAGCCATCGAACGCCAGCAAGAGAATGAGGCTCGTGCGGAAGCTGCCGAACTGGAAGTGGACGAGCTGAAAAGCCAGCTTGCTGACTACCAGCAGGCGCTGGACGTCCAGCAAACGCGCGCGATCCAGTATAACCAGGCGATTGCTGCGCTTAATCGTGCCAAAGAACTGTGCCATCTGCCGGACTTAACCGCCGACTGCGCCGCCGAATGGCTGGAAACCTTCCAGGCGAAAGAGCTGGAAGCGACTGAAAAAATGCTCTCTCTTGAGCAGAAAATGAGCATGGCGCAAACCGCGCACAGCCAGTTTGAGCAGGCTTATCAGCTGGTGGTGGCAATCAACGGCCCACTGGCGCGTAACGAGGCGTGGGATGTCGCTCGCGAACTATTGCGCGAAGGGGTCGATCAGCGTCACCTGGCAGAGCAGGTTCAGCCGCTGCGGATGCGATTAAGCGAACTGGAACAGCGTCTACGCGAGCAGCAAGAAGCTGAGCGTCTGCTGGCAGATTTCTGCAAACGTCAGGGCAAGAATTTTGATATCGACGAACTGGAAGCCCTGCATCAGGAACTGGAAGCACGCATTGCCTCTCTTTCCGATAGCGTGTCTAACGCCCGTGAAGAGCGCATGGCACTGCGCCAGGAGCAGGAACAGCTGCAGTCTCGCATTCAGAGTTTGATGCAGCGTGCGCCGGTTTGGCTGGCAGCGCAAAACAGTCTCAACCAGTTGAGCGAACAGTGCGGCGAAGAGTTTACCTCCAGCCAGGACGTCACCGAATATCTGCAACAGTTGCTGGAGCGTGAGCGAGAGGCGATTGTTGAACGCGATGAAGTGGGCGCGCGCAAAAACGCCGTCGATGAAGAGATCGAACGTTTAAGCCAGCCTGGCGGCTCTGAAGATCAGCGTCTGAACGCGCTGGCGGAGCGTTTTGGTGGTGTGCTGCTGTCAGAAATTTATGACGACGTTAGCCTGGAAGATGCGCCGTACTTCTCAGCGCTGTATGGCCCGTCACGCCACGCCATCGTGGTGCCAGATCTGTCACAGGTAACTGAACACCTGGAAGGCTTGACCGATTGCCCGGAAGATCTCTATCTGATCGAAGGAGATCCGCAGTCATTCGATGACAGCGTGTTCAGCGTTGATGAGCTGGAAAAAGCGGTAGTGGTGAAAATCGCCGATCGTCAGTGGCGTTATTCACGTTTCCCGGAAGTGCCGCTGTTTGGTCGTGCTGCGCGTGAAAGCCGTATTGAAAGCCTCCATGCCGAGCGTGAAGTGCTTTCCGAACGCTTCGCCACGCTCTCCTTTGATGTACAGAAAACTCAGCGTCTGCATCAGGCGTTCAGCCGCTTTATCGGCAGTCATCTGGCGGTTGCGTTTGAGTCTGACCCGGAAGCAGAAATCCGTCAACTGAACAGCCGTCGCGTCGAACTGGAGCGGGCGTTAAGTAATCATGAAAATGATAACCAGCAGCAGCGTATTCAGTTTGAGCAGGCGAAAGAGGGCGTTACGGCGCTGAACCGCATTCTGCCGCGTCTCAACCTGTTGGCTGATGACAGCCTGGCGGATCGCGTCGATGAAATCCGCGAACGTCTGGATGAAGCCCAGGAAGCCGCGCGTTTTGTTCAGCAGTTTGGCAATCAACTGGCGAAACTGGAACCGATTGTTTCGGTATTGCAGAGCGACCCGGAACAGTTCGAACAGTTAAAAGAAGATTACGCGTACTCTCAGCAGATGCAGCGCGATGCCCGTCAGCAGGCGTTTGCCCTGACGGAAGTGGTGCAGCGTCGTGCGCACTTTAGCTATTCTGACTCGGCAGAAATGCTTAGCGGTAACAGCGATCTCAACGAAAAACTGCGTGAACGTCTGGAACAGGCGGAAGCGGAGCGTACCCGCGCTCGCGAAGCGTTGCGCGGTCACGCAGCGCAGTTGAGTCAGTACAACCAGGTGCTGGCTTCGCTGAAAAGTTCTTACGACACCAAAAAAGAGCTACTCAACGATCTGCAACGTGAATTGCAGGATATCGGCGTGCGTGCTGATAGCGGGGCAGAAGAGCGGGCGCGTATTCGCCGTGACGAGCTGCATGCGCAACTGAGCAATAACCGTTCACGCCGCAATCAACTGGAAAAAGCGCTTACCTTCTGCGAAGCGGAGATGGACAACCTGACCCGCAAACTGCGCAAGCTGGAGCGGGATTACTTTGAGATGCGCGAGCAGGTAGTGACCGCCAAAGCGGGCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGGCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTATCAGCATCTGCGTGAACGTATTCGTCAGGATATTATTCGTACCGATGATCCGGTGGAAGCTATCGAACAGATGGAGATTGAACTTAGCCGTCTGACCGAAGAATTAACCTCCCGTGAACAGAAACTGGCGATCAGTTCCCGCAGCGTGGCGAACATCATTCGCAAAACCATTCAGCGCGAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGTGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCGGAAGCGCTGGCGAAACTGTATCAACGTCTTAACCCGCAGATTGATATGGGGCAGCGCACGCCGCAGACCATCGGTGAAGAACTGCTGGATTACCGCAACTATCTGGAAATGGAAGTTGAGGTTAACCGTGGTTCCGATGGCTGGCTGCGCGCAGAGTCTGGTGCATTGTCGACCGGTGAGGCGATTGGTACCGGTATGTCGATTCTGGTGATGGTGGTACAAAGCTGGGAAGATGAATCTCGCCGCCTGCGCGGTAAAGATATCTCTCCTTGCCGCCTGCTGTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCAGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCGTCGGCCTGCGAGGATTTGCGCCGCAACTCCCTGAAACGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAA", 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"MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTMAAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVVGVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAMEGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLRDYLLPENSGVRKAFQDMEAALRENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMRHANERRVHLDKALEFRRELHTSRQQLAAEQYKHVDMARELAEHNGAEGDLEADYQAASDHLNLVQTALRQQEKIERYEADLDELQIRLEEQNEVVAEAIERQQENEARAEAAELEVDELKSQLADYQQALDVQQTRAIQYNQAIAALNRAKELCHLPDLTADCAAEWLETFQAKELEATEKMLSLEQKMSMAQTAHSQFEQAYQLVVAINGPLARNEAWDVARELLREGVDQRHLAEQVQPLRMRLSELEQRLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARIASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTSSQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFGGVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVTEHLEGLTDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAEREVLSERFATLSFDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQLNSRRVELERALSNHENDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRERLDEAQEAARFVQQFGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFALTEVVQRRAHFSYSDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQVLASLKSSYDTKKELLNDLQRELQDIGVRADSGAEERARIRRDELHAQLSNNRSRRNQLEKALTFCEAEMDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADDLRSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAVYQHLRERIRQDIIRTDDPVEAIEQMEIELSRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRMLNQGLQNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLNPQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSILVMVVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPENISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGTDEAPSQAS", 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"aliases": [ + [ + "gene_synonym", + "NP_415446.1" + ], + [ + "gene_synonym", + "ycbK" + ], + [ + "gene_synonym", + "GeneID:945538" + ], + [ + "gene_synonym", + "GI:16128893" + ], + [ + "gene_synonym", + "ASAP:ABE-0003145" + ], + [ + "gene_synonym", + "JW0909" + ], + [ + "gene_synonym", + "b0926" + ], + [ + "gene_synonym", + "ECK0917" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB06" + ], + [ + "gene_synonym", + "EcoGene:EG13703" + ] + ], + "dna_sequence": 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"MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW", + "protein_translation_length": 182, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_415447.1" + ], + [ + "gene_synonym", + "EcoGene:EG13704" + ], + [ + "gene_synonym", + "ycbL" + ], + [ + "gene_synonym", + "ECK0918" + ], + [ + "gene_synonym", + "GeneID:945551" + ], + [ + "gene_synonym", + "GI:16128894" + ], + [ + "gene_synonym", + "ASAP:ABE-0003147" + ], + [ + "gene_synonym", + "b0927" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75849" + ], + [ + "gene_synonym", + "JW0910" + ] + ], + "dna_sequence": 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"MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDDSGLTLMQILLTHGHLDHVGAAAELAQHYGVPVFGPEKEDEFWLQGLPAQSRMFGLEECQPLTPDRWLNEGDTISIGNVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGRSDFPRGDHNQLISSIKDKLLPLGDDVIFIPGHGPLSTLGYERLHNPFLQDEMPVW", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "aspC" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00509" + ], + [ + "gene_synonym", + "NP_415448.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0003150" + ], + [ + "gene_synonym", + "b0928" + ], + [ + "gene_synonym", + "EcoGene:EG10096" + ], + [ + "gene_synonym", + "GeneID:945553" + ], + [ + "gene_synonym", + "GI:16128895" + ], + [ + "gene_synonym", + "ECK0919" + ], + [ + "gene_synonym", + "JW0911" + ] + ], + "dna_sequence": 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"gene_synonym", + "cry" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02931" + ], + [ + "gene_synonym", + "coa" + ], + [ + "gene_synonym", + "GeneID:945554" + ], + [ + "gene_synonym", + "ompF" + ], + [ + "gene_synonym", + "GI:16128896" + ], + [ + "gene_synonym", + "b0929" + ], + [ + "gene_synonym", + "nfxB?" + ], + [ + "gene_synonym", + "JW0912" + ], + [ + "gene_synonym", + "tolF" + ], + [ + "gene_synonym", + "ECK0920" + ] + ], + "dna_sequence": 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"ASAP:ABE-0003162" + ], + [ + "gene_synonym", + "ECK0921" + ], + [ + "gene_synonym", + "EcoGene:EG10094" + ], + [ + "gene_synonym", + "NP_415450.1" + ], + [ + "gene_synonym", + "tss" + ], + [ + "gene_synonym", + "JW0913" + ], + [ + "gene_synonym", + "GI:16128897" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P18133" + ], + [ + "gene_synonym", + "pncB" + ], + [ + "gene_synonym", + "GeneID:946648" + ], + [ + "gene_synonym", + "ASAP:ABE-0003167" + ], + [ + "gene_synonym", + "b0931" + ], + [ + "gene_synonym", + "JW0914" + ], + [ + "gene_synonym", + "GI:16128898" + ], + [ + "gene_synonym", + "ECK0922" + ] + ], + "dna_sequence": 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"MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVRHGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEGALVISNLPERFTLKIINEISPAANTALEGLYQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANYQSEYRVEHEDIAKRTLRNACLRFLAFGETHLADVLVSKQFHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFHAEDGSGYLFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLENLSGDLYEKITKALA", + "protein_translation_length": 870, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG12358" + ], + 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"gene_synonym", + "UniProtKB/Swiss-Prot:P75858" + ], + [ + "gene_synonym", + "EcoGene:EG13712" + ], + [ + "gene_synonym", + "elfG" + ], + [ + "gene_synonym", + "GI:16128908" + ], + [ + "gene_synonym", + "ECK0932" + ], + [ + "gene_synonym", + "ASAP:ABE-0003191" + ], + [ + "gene_synonym", + "b0941" + ], + [ + "gene_synonym", + "JW0924" + ], + [ + "gene_synonym", + "GeneID:947185" + ], + [ + "gene_synonym", + "ycbT" + ] + ], + "dna_sequence": 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"", + "protein_md5": "a4f4dea78477e0cad4ffd10432617020", + "protein_translation": "MKKKTIFQCVILFFSILNIHVGMAGPEQVSMHIYGNVVDQGCDVATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAPTLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKSTKAGATGGNATAVLYFDLVYQ", + "protein_translation_length": 180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG13714" + ], + [ + "gene_synonym", + "NP_415463.2" + ], + [ + "gene_synonym", + "ycbV" + ], + [ + "gene_synonym", + "GeneID:945562" + ], + [ + "gene_synonym", + "GI:90111191" + ], + [ + "gene_synonym", + "ASAP:ABE-0003195" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75860" + ], + [ + "gene_synonym", + "ECK0934" + ], + [ + "gene_synonym", + "b0943" + ], + [ + "gene_synonym", + "JW5123" + ] + ], + "dna_sequence": "ATGTTGAAACGGATAATCTGGATTCTGTTCTTATTGGGATTAACGTGGGGCTGTGAGCTATTTGCCCATGATGGCACGGTCAACATTAGCGGATCGTTTCGCCGTAATACATGCGTGCTGGCACAGGATAGCAAGCAAATCAATGTGCAGTTAGGCGATGTCTCGCTGACACGTTTTTCTCATGGGAATTATGGCCCGGAGAAATCTTTCATCATTAATTTGCAGGATTGCGGAACAGATGTCAGCACGGTTGACGTCACCTTTTCAGGAACCCCCGACGGAGTGCAGAGCGAAATGTTGTCCATTGAAAGTGGTACGGATGCAGCCAGCGGGCTGGCAATTGCGATTCTGGATGATGCGAAGATATTGATTCCGCTTAACCAGGCGAGTAAAGACTACAGCCTACATAGCGGTAAGGTGCCATTAACTTTTTATGCGCAATTGCGACCTGTCAATAGCGATGTGCAGTCGGGTAAAGTGAATGCCAGCGCGACATTTGTACTTCATTATGACTAA", + "dna_sequence_length": 516, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_924", + "location": [ + [ + "NC_000913", + 1003439, + "+", + 516 + ] + ], + "md5": "2ecd1a689451dc52fd676bc0552c0a98", + "parent_gene": "", + "protein_md5": "15e74fc5841c10fbae4b43f485281b38", + "protein_translation": "MLKRIIWILFLLGLTWGCELFAHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSHGNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLSIESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD", + "protein_translation_length": 171, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW5124" + ], + [ + "gene_synonym", + "NP_415464.4" + ], + [ + "gene_synonym", + "ycbF" + ], + [ + "gene_synonym", + "ASAP:ABE-0003197" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P40876" + ], + [ + "gene_synonym", + "EcoGene:EG12397" + ], + [ + "gene_synonym", + "ECK0935" + ], + [ + "gene_synonym", + "GI:90111192" + ], + [ + "gene_synonym", + "GeneID:945559" + ], + [ + "gene_synonym", + "b0944" + ] + ], + "dna_sequence": "ATGACTAATACGTGGAACAGATTGGCGCTCTTGATTTTCGCCGTTTTATCGCTGCTGGTGGCGGGTGAATTGCAGGCAGGAGTGGTGGTCGGCGGAACGCGATTTATCTTTCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCTTGCCTGTGGATCGCGAAACGCTATTTGAGTTAAGCATTGCCAGCGTGCCATCCGGCAAAGTTGAAAATCAGAGCGTAAAAGTGGCGATGCGCTCGGTATTTAAACTGTTCTGGCGACCCGAAGGTTTGCCGGGCGACCCGCTGGAAGCTTATCAACAATTACGCTGGACACGGAATTCGCAGGGTGTACAACTCACTAACCCAACGCCTTATTACATTAACCTGATTCAGGTGAGTGTAAATGGTAAAGCGTTAAGTAATGTGGGAGTTGTGCCGCCTAAAAGCCAGCGTCAGACAAGCTGGTGTCAGGCAATCGCACCGTGTCATGTCGCCTGGCGGGCGATAAATGATTACGGCGGGTTGAGTGCAAAGAAGGAGCAAAATCTGCCCTGA", + "dna_sequence_length": 711, + "functions": [ + "putative periplasmic pilin chaperone" + ], + "id": "CDS_925", + "location": [ + [ + "NC_000913", + 1003947, + "+", + 711 + ] + ], + "md5": "cd25eb58b4383e4e9ee991f2ac84b87b", + "parent_gene": "", + "protein_md5": "03bbf7ed385172c5b08ce47bd248169b", + "protein_translation": "MTNTWNRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPLLAAPPLILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNVGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGGLSAKKEQNLP", + "protein_translation_length": 236, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG10807" + ], + [ + "gene_synonym", + "NP_415465.1" + ], + [ + "gene_synonym", + "JW0928" + ], + [ + "gene_synonym", + "GeneID:945556" + ], + [ + "gene_synonym", + "ASAP:ABE-0003201" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7E1" + ], + [ + "gene_synonym", + "ECK0936" + ], + [ + "gene_synonym", + "pyrD" + ], + [ + "gene_synonym", + "GI:16128912" + ], + [ + "gene_synonym", + "b0945" + ] + ], + "dna_sequence": "ATGTACTACCCCTTCGTTCGTAAAGCCCTTTTCCAGCTCGATCCAGAGCGCGCTCATGAGTTTACTTTTCAGCAATTACGCCGTATTACAGGAACGCCGTTTGAAGCACTGGTGCGGCAGAAAGTGCCTGCGAAACCTGTTAACTGCATGGGCCTGACGTTTAAAAATCCGCTTGGTCTGGCAGCCGGTCTTGATAAAGACGGGGAGTGCATTGACGCGTTAGGCGCGATGGGATTTGGATCGATCGAGATCGGTACCGTCACGCCACGTCCACAGCCAGGTAATGACAAGCCGCGTCTCTTTCGTCTGGTAGATGCCGAAGGTTTGATCAACCGTATGGGCTTTAATAATCTTGGCGTTGATAACCTCGTAGAGAACGTAAAAAAGGCCCATTATGACGGCGTCCTGGGTATTAACATCGGCAAAAATAAAGATACGCCAGTGGAGCAGGGCAAAGATGACTATCTGATTTGTATGGAAAAAATCTATGCCTATGCGGGATATATCGCCATCAATATTTCATCGCCGAATACCCCAGGATTACGCACGCTGCAATATGGTGAAGCGCTGGATGATCTCTTAACCGCGATTAAAAATAAGCAAAATGATTTGCAAGCGATGCACCATAAATATGTGCCGATCGCAGTGAAGATCGCGCCGGATCTTTCTGAAGAAGAATTGATCCAGGTTGCCGATAGTTTAGTTCGCCATAATATTGATGGCGTTATTGCAACCAATACCACACTCGATCGTTCTCTTGTTCAGGGAATGAAAAATTGCGATCAAACCGGTGGCTTAAGTGGTCGTCCGCTTCAGTTAAAAAGCACCGAAATTATTCGCCGCTTGTCACTGGAATTAAACGGTCGCTTACCGATCATCGGTGTTGGCGGCATCGACTCGGTTATCGCTGCGCGTGAAAAGATTGCTGCGGGTGCCTCACTGGTGCAAATTTATTCTGGTTTTATTTTTAAAGGTCCGCCGCTGATTAAAGAAATCGTTACCCATATCTAA", 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"GeneID:945552" + ], + [ + "gene_synonym", + "JW5125" + ], + [ + "gene_synonym", + "ECK0937" + ], + [ + "gene_synonym", + "b0946" + ], + [ + "gene_synonym", + "ycbW" + ], + [ + "gene_synonym", + "NP_415466.4" + ] + ], + "dna_sequence": "ATGCGAATTAAACCAGACGATAACTGGCGTTGGTATTACGATGAAGAGCACGATCGAATGATGCTCGATTTAGCCAATGGTATGCTATTTCGCTCACGTTTTGCGCGCAAGATGTTGACTCCAGATGCCTTTTCTCCCGCAGGCTTTTGCGTTGACGACGCCGCGCTCTATTTCTCTTTTGAAGAAAAGTGCCGCGATTTTAATTTATCTAAAGAACAAAAAGCCGAACTGGTGCTGAATGCACTGGTAGCAATTCGCTATCTCAAACCGCAAATGCCGAAAAGCTGGCATTTTGTTTCCCATGGTGAAATGTGGGTGCCCATGCCGGGCGATGCGGCCTGCGTTTGGTTGAGCGATACTCACGAGCAGGTCAATTTGCTGGTCGTTGAATCTGGCGAAAATGCCGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAA", + "dna_sequence_length": 543, + "functions": [ + "FtsZ stabilizer" + ], + "id": "CDS_927", + "location": [ + [ + "NC_000913", + 1005952, + "+", + 543 + ] + ], + "md5": "d7a0da7dc052eee3f2e0b4697ea7c319", + "parent_gene": "", + "protein_md5": "46cd86b0ab1a1ff8395460bbf4878e7e", + "protein_translation": "MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV", + "protein_translation_length": 180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG13716" + ], + [ + "gene_synonym", + "GeneID:945563" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75863" + ], + [ + "gene_synonym", + "ASAP:ABE-0003206" + ], + [ + "gene_synonym", + "ycbX" + ], + [ + "gene_synonym", + "ECK0938" + ], + [ + "gene_synonym", + "JW5126" + ], + [ + "gene_synonym", + "GI:16128914" + ], + [ + "gene_synonym", + "b0947" + ], + [ + "gene_synonym", + "NP_415467.1" + ] + ], + "dna_sequence": "GTGGCGACATTAATCCGGCTTTTTATTCATCCTGTTAAATCGATGCGCGGCATTGGTCTTACACATGCTCTGGCAGATGTCAGTGGTCTGGCCTTCGATCGCATCTTTATGATCACGGAACCTGACGGTACGTTTATTACCGCTCGCCAGTTTCCCCAGATGGTACGGTTTACTCCTTCACCTGTGCATGATGGCTTGCATCTCACCGCACCAGATGGCAGTAGCGCATATGTTCGTTTTGCTGATTTCGCCACACAAGACGCACCAACCGAAGTTTGGGGCACACATTTTACCGCGCGAATTGCGCCAGACGCGATCAACAAATGGCTAAGTGGATTTTTCTCCCGCGAAGTGCAATTACGCTGGGTGGGGCCACAAATGACCCGGCGCGTGAAACGCCACAACACTGTACCTCTGTCATTTGCTGATGGCTATCCTTACCTTCTTGCTAACGAAGCCTCGTTACGTGATCTCCAACAACGTTGTCCGGCCAGTGTAAAAATGGAGCAATTCCGCCCCAATCTGGTGGTTTCCGGCGCGTCAGCCTGGGAAGAAGATCGCTGGAAAGTGATTCGCATTGGTGATGTGGTGTTTGATGTGGTTAAACCTTGTAGCCGCTGTATTTTCACCACCGTCAGCCCAGAAAAAGGGCAAAAACATCCGGCAGGCGAACCATTAAAAACATTGCAATCTTTCCGCACTGCCCAGGATAACGGCGATGTCGATTTTGGTCAGAATTTAATTGCCCGTAATAGCGGCGTGATTCGCGTTGGCGATGAGGTGGAAATTCTGGCAACGGCTCCGGCAAAAATTTACGGCGCAGCTGCCGCTGATGATACCGCCAACATCACGCAACAACCGGACGCAAATGTAGATATTGACTGGCAGGGACAGGCATTTCGTGGAAATAACCAACAGGTGTTGCTGGAGCAATTAGAAAATCAGGGAATTCGTATCCCTTATTCTTGCCGCGCGGGCATTTGTGGAAGTTGCCGTGTTCAGCTTTTAGAAGGCGAAGTCACGCCGCTGAAAAAATCAGCAATGGGCGATGATGGCACCATTCTTTGCTGTAGCTGTGTACCGAAGACTGCACTTAAGTTGGCGCGTTAG", 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"gene_synonym", + "rlmKL" + ], + [ + "gene_synonym", + "b0948" + ], + [ + "gene_synonym", + "ycbY" + ], + [ + "gene_synonym", + "ECK0939" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75864" + ], + [ + "gene_synonym", + "GI:16128915" + ], + [ + "gene_synonym", + "ASAP:ABE-0003211" + ], + [ + "gene_synonym", + "NP_415468.1" + ] + ], + "dna_sequence": 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"gene_synonym", + "uup" + ], + [ + "gene_synonym", + "ECK0940" + ], + [ + "gene_synonym", + "b0949" + ], + [ + "gene_synonym", + "EcoGene:EG13134" + ], + [ + "gene_synonym", + "ASAP:ABE-0003213" + ], + [ + "gene_synonym", + "GI:16128916" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43672" + ] + ], + "dna_sequence": "ATGTCATTAATCAGTATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGTGGGCCGCAACGGCGCAGGCAAATCGACGTTAATGAAAATCCTCAACCGTGAACAAGGGCTGGATGACGGTCGCATTATTTACGAGCAAGATTTGATTGTAGCGCGTCTGCAACAGGATCCGCCGCGTAACGTTGAGGGTAGCGTTTATGATTTCGTTGCCGAAGGCATTGAAGAACAAGCGGAATATCTGAAACGCTATCACGATATTTCGCGCCTGGTGATGAACGACCCGAGCGAGAAAAATCTCAACGAACTGGCGAAGGTTCAGGAACAGCTGGATCACCACAACCTGTGGCAGCTGGAAAACCGCATCAACGAAGTGCTGGCGCAACTGGGGTTAGATCCTAACGTTGCGCTGTCGTCGCTTTCCGGCGGCTGGTTGCGTAAAGCGGCATTAGGACGCGCGCTGGTGAGTAATCCGCGCGTGCTGTTGCTTGATGAACCGACAAACCACCTGGATATTGAAACCATCGACTGGCTGGAAGGGTTTTTGAAAACTTTCAACGGGACGATTATTTTCATCTCCCACGACCGTTCGTTTATCCGCAATATGGCGACGCGCATTGTTGATCTCGATCGCGGCAAGCTGGTGACCTATCCAGGGAATTACGACCAGTACCTGCTGGAAAAAGAAGAAGCCCTGCGCGTGGAAGAATTACAAAATGCCGAGTTCGATCGCAAACTGGCGCAGGAAGAGGTGTGGATCCGCCAGGGGATCAAAGCACGCCGTACCCGTAATGAAGGCCGCGTACGCGCCCTGAAAGCGATGCGTCGCGAACGTGGTGAACGTCGCGAAGTGATGGGTACCGCAAAGATGCAGGTGGAAGAGGCCAGCCGCTCCGGTAAAATCGTTTTCGAAATGGAAGACGTTTGCTACCAGGTTAACGGTAAGCAACTGGTGAAAGATTTTTCTGCCCAGGTTCTACGTGGCGACAAAATTGCCCTGATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCACCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAAGAGGTGATGGTTAACGGCAAGCCACGCCACGTATTGGGCTATTTGCAGGACTTTCTGTTCCATCCGAAACGGGCGATGACGCCGGTACGTGCGCTTTCTGGCGGTGAGCGGAACCGCTTGCTGCTGGCGCGTTTGTTCCTCAAACCAAGCAACTTATTGATTCTTGACGAACCGACCAACGATCTTGATGTCGAAACGCTGGAACTGCTGGAAGAACTGATCGACAGCTATCAGGGCACGGTATTGCTGGTTAGCCACGATCGTCAGTTTGTCGATAACACCGTTACAGAATGTTGGATCTTCGAAGGCGGCGGTAAAATTGGTCGTTATGTCGGCGGTTATCATGATGCCCGTGGTCAGCAAGAGCAGTATGTGGCGCTCAAACAGCCTGCGGTGAAAAAAACCGAAGAAGCCGCCGCGGCAAAAGCAGAAACTGTAAAACGCAGCAGTAGCAAACTAAGCTATAAATTGCAGCGCGAACTGGAGCAGCTACCGCAATTGCTCGAAGATCTGGAGGCGAAGCTGGAAGCCCTACAGACGCAAGTGGCGGATGCTTCCTTCTTCAGTCAGCCGCATGAGCAGACGCAAAAAGTGCTTGCTGATATGGCTGCTGCAGAGCAGGAGCTGGAGCAAGCCTTTGAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGA", 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"protein_translation_length": 635, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFL9" + ], + [ + "gene_synonym", + "JW0933" + ], + [ + "gene_synonym", + "EcoGene:EG12965" + ], + [ + "gene_synonym", + "GeneID:944999" + ], + [ + "gene_synonym", + "ECK0941" + ], + [ + "gene_synonym", + "pqi5" + ], + [ + "gene_synonym", + "NP_415470.1" + ], + [ + "gene_synonym", + "GI:16128917" + ], + [ + "gene_synonym", + "b0950" + ], + [ + "gene_synonym", + "pqiA" + ], + [ + "gene_synonym", + "ASAP:ABE-0003219" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "NP_415471.1" + ], + [ + "gene_synonym", + "GI:16128918" + ], + [ + "gene_synonym", + "pqiB" + ], + [ + "gene_synonym", + "ECK0942" + ], + [ + "gene_synonym", + "ASAP:ABE-0003221" + ], + [ + "gene_synonym", + "EcoGene:EG12966" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43671" + ] + ], + "dna_sequence": "ATGGAATCTAATAATGGGGAAGCCAAAATCCAGAAAGTGAAGAACTGGTCTCCCGTGTGGATATTTCCTATCGTCACGGCGCTCATTGGGGCCTGGGTTCTTTTTTATCATTACAGCCATCAGGGACCGGAAGTGACCCTGATCACCGCGAATGCGGAAGGAATTGAAGGTGGCAAAACCACCATTAAAAGCCGTAGCGTTGACGTCGGCGTGGTTGAAAGCGCCACACTGGCTGATGATTTGACGCACGTTGAAATCAAAGCGCGGCTGAATTCCGGTATGGAAAAATTGCTGCATAAAGACACCGTCTTTTGGGTGGTGAAACCGCAGATTGGTCGCGAAGGGATTAGCGGCCTGGGAACGCTGCTGTCTGGAGTTTATATCGAACTGCAGCCAGGCGCGAAAGGCAGCAAAATGGATAAATACGATTTGCTGGACTCGCCACCGTTGGCCCCGCCTGATGCGAAAGGTATCCGTGTGATTCTCGATAGCAAAAAAGCCGGGCAGCTCTCGCCAGGAGATCCGGTGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCCAGTGGCACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGTACTGATTCGTATCGAGCCAGAGCGGCTGAAAATGCAGCTTGGCGAAAATGCGGATGTTGTTGAGCACCTTGGCGAATTGTTGAAACGTGGTTTACGCGGATCGCTGAAAACCGGAAACCTGGTCACTGGTGCACTGTATGTTGATCTCGATTTCTATCCAAATACGCCTGCAATAACCGGTATTCGTGAATTTAATGGTTATCAGATTATCCCGACCGTTAGCGGCGGCCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTCGCTAGCCAGTCGATGCAGCAGTTGCCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGCTCCGCAGCCTACAACAAGATGGTGGCGGATATGCAGCGCCTTGATCAGGTGTTGCGAGAACTGCAACCGGTGCTGAAAACGCTCAATGAGAAGAGTAACGCGCTGGTATTTGAAGCGAAGGACAAAAAAGATCCAGAGCCGAAGAGGGCGAAACAATGA", 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"gene_synonym", + "hspQ" + ], + [ + "gene_synonym", + "b0966" + ], + [ + "gene_synonym", + "GI:145698238" + ], + [ + "gene_synonym", + "EcoGene:EG13724" + ], + [ + "gene_synonym", + "ECK0957" + ], + [ + "gene_synonym", + "NP_415486.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB20" + ], + [ + "gene_synonym", + "ASAP:ABE-0003269" + ], + [ + "gene_synonym", + "GeneID:945578" + ], + [ + "gene_synonym", + "JW5970" + ] + ], + "dna_sequence": "ATGATTGCCAGCAAATTCGGTATCGGCCAGCAGGTCCGCCATTCCCTGTTAGGTTATCTCGGAGTGGTCGTGGATATCGACCCGGTTTATTCGCTCTCTGAACCGTCGCCTGATGAGCTGGCGGTGAATGACGAGCTTCGCGCCGCTCCGTGGTATCACGTAGTGATGGAGGACGATAACGGCCTACCGGTTCATACCTACCTGGCTGAAGCCCAGCTAAGTAGCGAATTGCAGGATGAACATCCTGAACAGCCATCCATGGATGAGCTGGCGCAGACCATCCGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAA", + "dna_sequence_length": 318, + "functions": [ + "heat shock protein involved in degradation of mutant DnaA", + "hemimethylated oriC DNA-binding protein" + ], + "id": "CDS_947", + "location": [ + [ + "NC_000913", + 1028721, + 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"gene_synonym", + "ECK0991" + ], + [ + "gene_synonym", + "NP_415520.1" + ], + [ + "gene_synonym", + "EcoGene:EG12193" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36659" + ], + [ + "gene_synonym", + "cbpA" + ], + [ + "gene_synonym", + "b1000" + ], + [ + "gene_synonym", + "GI:16128966" + ], + [ + "gene_synonym", + "ASAP:ABE-0003379" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P36661" + ], + [ + "gene_synonym", + "b1001" + ], + [ + "gene_synonym", + "GI:16128967" + ] + ], + "dna_sequence": 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"protein_translation": "MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPKFAQKAALFNIETFFGWVSDVETFCDALSPTSFAHIA", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK1003" + ], + [ + "gene_synonym", + "JW0997" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75898" + ], + [ + "gene_synonym", + "NP_415532.3" + ], + [ + "gene_synonym", + "GeneID:945643" + ], + [ + "gene_synonym", + "ycdM" + ], + [ + "gene_synonym", + "rutA" + ], + [ + "gene_synonym", + "GI:49176071" + ], + [ + "gene_synonym", + "EcoGene:EG13859" + ], + [ + "gene_synonym", + "ASAP:ABE-0003416" + ], + [ + "gene_synonym", + "b1012" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "ycdB" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31545" + ], + [ + "gene_synonym", + "b1019" + ], + [ + "gene_synonym", + "GI:16128983" + ], + [ + "gene_synonym", + "JW1004" + ], + [ + "gene_synonym", + "GeneID:946500" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0003458" + ], + [ + "gene_synonym", + "EcoGene:EG11734" + ], + [ + "gene_synonym", + "GI:16128984" + ], + [ + "gene_synonym", + "b1020" + ], + [ + "gene_synonym", + "phoH" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9K1" + ], + [ + "gene_synonym", + "JW1005" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK1013" + ], + [ + "gene_synonym", + "GeneID:945604" + ], + [ + "gene_synonym", + "NP_415542.1" + ], + [ + "gene_synonym", + "EcoGene:EG13864" + ], + [ + "gene_synonym", + "pgaB" + ], + [ + "gene_synonym", + "b1023" + ], + [ + "gene_synonym", + "GI:16128987" + ], + [ + "gene_synonym", + "JW5142" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75906" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0003469" + ], + [ + "gene_synonym", + "NP_415543.1" + ], + [ + "gene_synonym", + "b1024" + ], + [ + "gene_synonym", + "GI:16128988" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69434" + ] + ], + "dna_sequence": 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"gene_synonym", + "ycdT" + ], + [ + "gene_synonym", + "ECK1015" + ], + [ + "gene_synonym", + "NP_415544.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0003472" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75908" + ], + [ + "gene_synonym", + "b1025" + ], + [ + "gene_synonym", + "JW5143" + ], + [ + "gene_synonym", + "GI:16128989" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "EcoGene:EG40006" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF82" + ], + [ + "gene_synonym", + "insF1" + ], + [ + "gene_synonym", + "b1026" + ], + [ + "gene_synonym", + "GI:16128990" + ], + [ + "gene_synonym", + "ECK0299" + ] + ], + "dna_sequence": 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+ 1095141, + "-", + 867 + ] + ], + "md5": "f16497ced719778b623ae488d3ff6549", + "parent_gene": "", + "protein_md5": "d747daab607a7e429605aaffca2556f8", + "protein_translation": "MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003477" + ], + [ + "gene_synonym", + "GeneID:945584" + ], + [ + "gene_synonym", + "EcoGene:EG40005" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF69" + ], + [ + "gene_synonym", + "insE1" + ], + [ + "gene_synonym", + "b1027" + ], + [ + "gene_synonym", + "NP_415546.2" + ], + [ + "gene_synonym", + "GI:226524706" + ], + [ + "gene_synonym", + "ECK0298" + ] + ], + "dna_sequence": 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"ASAP:ABE-0003486" + ], + [ + "gene_synonym", + "EcoGene:EG14357" + ], + [ + "gene_synonym", + "b1028" + ], + [ + "gene_synonym", + "JW5145" + ] + ], + "dna_sequence": "GCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCAATTATCAAAGAAAATCTCTCATTACACTTAACTCATACGGTGAAATGGACTGAATCTCTCGATACATTTCTGAATATGCCAACCCCGGTAGCTTTCCTTGAAATAAGTAATAAGCCCTATTTGGGGAATATGTTAAATGATTTTGCTGGCGTGGATCAGCAACGAGTTATGCATTGTCGTAAAGCATTTAGTGATGCAAAGGTATTCAAATGA", + "dna_sequence_length": 342, + "id": "CDS_1010", + "location": [ + [ + "NC_000913", + 1095505, + "+", + 342 + ] + ], + "md5": "164b87cf6905d554f3d87ba80f47f60c", + "parent_gene": "", + "protein_md5": "e9009a37473a2cf2c69ac918de4271c2", + "protein_translation": "AWHTRLMEDGVQAMRDYLAGLDIASPEHQVLMNVTAKSEVAPSIIKENLSLHLTHTVKWTESLDTFLNMPTPVAFLEISNKPYLGNMLNDFAGVDQQRVMHCRKAFSDAKVFK", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003489" + ], + [ + "gene_synonym", + "EcoGene:EG13867" + ], + [ + "gene_synonym", + "JW1015" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75910" + ], + [ + "gene_synonym", + "ycdU" + ], + [ + "gene_synonym", + "ECK1017" + ], + [ + "gene_synonym", + "NP_415548.1" + ], + [ + "gene_synonym", + "GeneID:945592" + ], + [ + "gene_synonym", + "GI:16128993" + ], + [ + "gene_synonym", + "b1029" + ] + ], + "dna_sequence": 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protein (ACP)-dependent acyltransferase" + ], + "id": "CDS_1032", + "location": [ + [ + "NC_000913", + 1116582, + "-", + 921 + ] + ], + "md5": "2c9c7ffe1f607cbf3f7ed45d16eb99ef", + "parent_gene": "", + "protein_md5": "6c599b7fb76e732c980913832a93871c", + "protein_translation": "MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGLGKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDRRIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPLIDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQAATTTGTWMLARMSGACLVPFVPRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKVVEKCIMMAPEQYMWLHRRFKTRPEGVPSRY", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:945601" + ], + [ + "gene_synonym", + "ASAP:ABE-0003581" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24188" + ], + [ + "gene_synonym", + "EcoGene:EG11116" + ], + [ + "gene_synonym", + "NP_415573.1" + ], + [ + "gene_synonym", + "JW1042" + ], + [ + "gene_synonym", + "yceA" + ], + [ + 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"gene_synonym", + "flaZ" + ], + [ + "gene_synonym", + "EcoGene:EG14272" + ], + [ + "gene_synonym", + "ASAP:ABE-0003658" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75942" + ], + [ + "gene_synonym", + "flgJ" + ], + [ + "gene_synonym", + "ECK1066" + ] + ], + "dna_sequence": 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"functions": [ + "flagellar hook-filament junction protein" + ], + "id": "CDS_1061", + "location": [ + [ + "NC_000913", + 1140033, + "+", + 954 + ] + ], + "md5": "38b4c7da86aa443757a984cc1c26c594", + "parent_gene": "", + "protein_md5": "b8fdcc9a6bb467597e983f2b572b97df", + "protein_translation": "MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLFQLSK", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW1071" + ], + [ + "gene_synonym", + "GI:16129047" + ], + [ + "gene_synonym", + "b1084" + ], + [ + "gene_synonym", + "EcoGene:EG10859" + ], + [ + "gene_synonym", + "NP_415602.1" + ], + [ + "gene_synonym", + "GeneID:945641" + ], + [ + "gene_synonym", + "ASAP:ABE-0003668" + ], + [ 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"MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYMLPKLHEEAMALPSEEEFAERKRPEQPALATFAMPDVPPAPTPAEPAAPVVAPAPKAAPATPAAPAQPGLLSRFFGALKALFSGGEETKPTEQPAPKAEAKPERQQDRRKPRQNNRRDRNERRDTRSERTEGSDNREENRRNRRQAQQQTAETRESRQQAEVTEKARTADEQQAPRRERSRRRNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRRKQRQLNQKVRYEQSVAEEAVVAPVVEETVAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQQEENNADNRDNGGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASGKVWIRYPIVRPQDVQVEEQREQEEVHVQPMVTEVPVAAAIEPVVSAPVVEEVAGVVEAPVQVAEPQPEVVETTHPEVIAAAVTEQPQVITESDVAVAQEVAEQAEPVVEPQEETADIEEVVETAEVVVAEPEVVAQPAAPVVAEVAAEVETVAAVEPEVTVEHNHATAPMTRAPAPEYVPEAPRHSDWQRPTFAFEGKGAAGGHTATHHASAAPARPQPVE", 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1144502, + "+", + 321 + ] + ], + "md5": "985d9ba8d5364c6a1bfd69d156d9c212", + "parent_gene": "", + "protein_md5": "1a7f91c874a9ba2ccb82ed6f20bb63a3", + "protein_translation": "MSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFFTSCW", + "protein_translation_length": 106, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW1072" + ], + [ + "gene_synonym", + "EcoGene:EG11118" + ], + [ + "gene_synonym", + "b1086" + ], + [ + "gene_synonym", + "ECK1071" + ], + [ + "gene_synonym", + "ASAP:ABE-0003675" + ], + [ + "gene_synonym", + "GI:16129049" + ], + [ + "gene_synonym", + "yceC" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA39" + ], + [ + "gene_synonym", + "rluC" + ], + [ + "gene_synonym", + "NP_415604.1" + ], + [ + "gene_synonym", + "GeneID:945637" + ] + ], + "dna_sequence": 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"EcoGene:EG12172" + ], + [ + "gene_synonym", + "ASAP:ABE-0003729" + ], + [ + "gene_synonym", + "GI:49176077" + ], + [ + "gene_synonym", + "b1103" + ], + [ + "gene_synonym", + "ycfF" + ], + [ + "gene_synonym", + "GeneID:948549" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACE7" + ] + ], + "dna_sequence": "GTGGCAGAAGAAACTATATTCAGCAAAATTATTCGTCGTGAGATCCCCTCCGATATCGTCTACCAGGATGATCTGGTAACGGCGTTTCGCGATATTTCGCCGCAAGCGCCAACGCATATTCTGATCATTCCGAATATCCTCATTCCGACTGTGAACGACGTCTCAGCTGAGCATGAGCAGGCGCTGGGACGCATGATCACCGTAGCGGCAAAAATTGCTGAGCAAGAAGGTATTGCCGAAGATGGCTATCGTCTGATCATGAATACCAACCGCCATGGCGGACAAGAGGTTTACCACATCCATATGCACTTGTTGGGTGGCCGTCCGCTGGGACCAATGCTGGCGCATAAAGGTCTGTAA", + "dna_sequence_length": 360, + "functions": [ + "purine nucleoside phosphoramidase, dadA activator protein" + ], + "id": "CDS_1081", + "location": [ + [ + "NC_000913", + 1161885, + "+", + 360 + ] + ], + "md5": "8c4044a71c97b4a6462c275aedb31ca7", + "parent_gene": "", + "protein_md5": "5ec0a5dd41b1ecfa4c370d803bcc79d4", + 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"gene_synonym", + "ECK1091" + ], + [ + "gene_synonym", + "EcoGene:EG13431" + ], + [ + "gene_synonym", + "ycfM" + ], + [ + "gene_synonym", + "b1105" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB38" + ], + [ + "gene_synonym", + "NP_415623.1" + ], + [ + "gene_synonym", + "JW5157" + ], + [ + "gene_synonym", + "GeneID:948536" + ], + [ + "gene_synonym", + "lpoB" + ] + ], + "dna_sequence": "ATGACAAAAATGAGTCGCTACGCCTTGATTACCGCGCTGGCGATGTTTCTCGCCGGGTGTGTGGGGCAACGTGAACCTGCACCGGTAGAAGAAGTGAAACCAGCGCCGGAACAACCAGCCGAGCCACAACAGCCTGTCCCCACAGTGCCCTCGGTGCCGACGATCCCGCAGCAGCCAGGCCCAATTGAGCACGAAGATCAAACTGCACCGCCTGCGCCGCATATTCGCCATTATGACTGGAATGGCGCAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTAGGTTTGTCGCCGCAGGACAGTTTAGGCACCCGTAGTAAAGCCATAGGCATTGCCCGCAATGTCGGCGCTCATTACGTGCTGTACTCCAGCGCCTCTGGCAACGTTAACGCTCCGACCCTACAAATGCAGCTGATGCTGGTGCAGACGGGCGAAATTATCTGGTCAGGTAAAGGTGCCGTTTCGCAGCAATAA", + "dna_sequence_length": 642, + "functions": [ + "OM lipoprotein stimulator of MrcB transpeptidase" + ], + "id": "CDS_1083", + "location": [ + [ + "NC_000913", + 1162638, + "+", + 642 + ] + ], + "md5": "fef271430b5d157435b95c72f5f194b4", + "parent_gene": "", + "protein_md5": "c65ae3b77f5a90c598beb8fb073593d0", + "protein_translation": "MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGPIEHEDQTAPPAPHIRHYDWNGAMQPMVSKMLGADGVTAGSVLLVDSVNNRTNGSLNAAEATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGTRSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQQ", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ycfN" + ], + [ + "gene_synonym", + "ASAP:ABE-0003735" + ], + [ + "gene_synonym", + "GI:16129069" + ], + [ + "gene_synonym", + "NP_415624.1" + ], + [ + "gene_synonym", + "ECK1092" + ], + [ + "gene_synonym", + "JW1092" + ], + [ + "gene_synonym", + "thiK" + ], + [ + "gene_synonym", + "b1106" + ], + [ + "gene_synonym", + "GeneID:948525" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75948" + ], + [ + "gene_synonym", + "EcoGene:EG13432" + ] + ], + "dna_sequence": "GTGCCGTTTCGCAGCAATAATCCCATCACGCGCGACGAATTGCTGTCGCGCTTTTTCCCGCAGTATCATCCCGTCACGACGTTTAATAGTGGGCTTAGTGGCGGGAGTTTTCTCATTGAACATCAGGGCCAGCGTTTTGTTGTGCGTCAGCCGCACGATCCTGATGCGCCGCAGTCCGCGTTCTTGCGCCAGTATCGGGCTTTATCACAACTACCCGCATGCATTGCACCGAAGCCGCATTTATATCTCCGTGACTGGATGGTAGTCGACTATCTGCCCGGCGCGGTAAAAACGTATTTGCCGGATACCAACGAACTGGCAGGCTTGCTGTATTATCTACATCAACAACCACGTTTTGGCTGGCGAATAACGCTGTTGCCGTTACTGGAACTGTACTGGCAGCAAAGCGATCCGGCGCGGCGGACAGTGGGTTGGCTGCGAATGTTAAAACGTCTGCGCAAAGCGCGGGAACCACGGCCTTTACGCTTAAGTCCATTGCATATGGATGTCCACGCCGGAAATTTAGTGCATAGCGCGTCAGGGTTAAAACTCATCGACTGGGAGTATGCCGGAGATGGTGATATCGCGCTGGAACTGGCGGCGGTGTGGGTGGAAAATACTGAACAGCACCGGCAATTGGTCAATGACTATGCCACTCGCGCGAAGATTTATCCGGCGCAATTATGGCGTCAGGTCAGGCGATGGTTTCCCTGGCTGCTGATGCTCAAAGCAGGGTGGTTTGAGTACCGCTGGCGACAAACCGGCGATCAACAATTTATCAGGCTGGCCGATGACACCTGGCGGCAGCTATTAATAAAACAATAA", + "dna_sequence_length": 825, + "functions": [ + "thiamine kinase" + ], + "id": "CDS_1084", + "location": [ + [ + "NC_000913", + 1163260, + "+", + 825 + ] + ], + "md5": 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"GI:90111213" + ], + [ + "gene_synonym", + "JW5158" + ], + [ + "gene_synonym", + "EcoGene:EG13434" + ], + [ + "gene_synonym", + "b1108" + ], + [ + "gene_synonym", + "ASAP:ABE-0003740" + ] + ], + "dna_sequence": "ATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCCGAAACATGATATGCAGCATCTGCTTAAAGAAGTGGACAAAATGTTGCAACTGAACGTTGACGAGCGTCCGCTAATTTGCGGCGTTGGCTTGGGCGGATACTGGGCGGAACGGATTGGTTTTCTTTGCGACATCCGCCAGGTGATCTTCAACCCTAATTTGTTCCCTTATGAGAACATGGAAGGCAAGATTGATCGCCCGGAAGAGTATGCCGATATTGCCACTAAGTGTGTGACCAACTTCCGTGAGAAGAATCGCGATCGTTGCCTGGTGATTTTGTCGCGTAATGATGAAGCGCTTAACAGCCAGCGGACATCTGAAGAGTTGCATCATTATTACGAGATTGTCTGGGACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAA", + "dna_sequence_length": 543, + "functions": [ + "putative UPF0227 family esterase" + ], + "id": "CDS_1086", + "location": [ + [ + "NC_000913", + 1165143, + "+", + 543 + ] + ], + "md5": "6b8e8e1d149fd2e060fa444603a9b2fd", + "parent_gene": "", 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1167599, + "+", + 540 + ] + ], + "md5": "639a24cda394f9b129b6b23eb5c8afae", + "parent_gene": "", + "protein_md5": "0bb9fe6df56d7fe4c9a6d6613406f3d5", + "protein_translation": "MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIKETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRDPGTQIPLDSNGQLILNNKV", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003754" + ], + [ + "gene_synonym", + "GeneID:947425" + ], + [ + "gene_synonym", + "ECK1097" + ], + [ + "gene_synonym", + "b1111" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75952" + ], + [ + "gene_synonym", + "GI:90111214" + ], + [ + "gene_synonym", + "ycfQ" + ], + [ + "gene_synonym", + "EcoGene:EG13435" + ], + [ + "gene_synonym", + "NP_415629.4" + ], + [ + "gene_synonym", + "JW5159" + ] + ], + "dna_sequence": 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"GeneID:945666" + ], + [ + "gene_synonym", + "b1113" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75954" + ], + [ + "gene_synonym", + "ASAP:ABE-0003760" + ], + [ + "gene_synonym", + "JW5820" + ], + [ + "gene_synonym", + "ldtC" + ] + ], + "dna_sequence": 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"functions": [ + "L,D-transpeptidase linking Lpp to murein" + ], + "id": "CDS_1091", + "location": [ + [ + "NC_000913", + 1170374, + "-", + 963 + ] + ], + "md5": "a7168ca2231d6aafb1ce65ca286e5870", + "parent_gene": "", + "protein_md5": "ada6452fdc3320c50c966f10e7cc237c", + "protein_translation": "MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGLDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNIINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL", + "protein_translation_length": 320, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW1100" + ], + [ + "gene_synonym", + "mfd" + ], + [ + "gene_synonym", + "NP_415632.1" + ], + [ + "gene_synonym", + "GI:16129077" + ], + [ + "gene_synonym", + "ECK1100" + ], + [ + "gene_synonym", + "EcoGene:EG11619" + ], + [ + "gene_synonym", + "GeneID:945681" + ], + [ + "gene_synonym", + "b1114" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30958" + ], + [ + "gene_synonym", + "ASAP:ABE-0003763" + ] + ], + "dna_sequence": "ATGCCTGAACAATATCGTTATACGCTGCCCGTCAAAGCGGGTGAGCAGCGTCTGCTGGGCGAGTTAACCGGCGCAGCCTGTGCAACGCTGGTAGCGGAAATTGCCGAACGTCACGCCGGTCCGGTGGTACTCATTGCACCAGATATGCAAAATGCTCTGCGTTTGCATGATGAAATCAGCCAGTTTACCGATCAAATGGTGATGAATCTGGCGGACTGGGAAACTCTTCCCTACGACAGTTTTTCGCCTCATCAGGACATTATCTCCTCGCGCCTTTCCACCCTTTACCAGCTACCGACGATGCAGCGTGGCGTACTGATTGTTCCGGTGAATACGCTTATGCAGCGCGTTTGCCCACACAGTTTTCTCCACGGTCATGCGCTGGTGATGAAAAAAGGTCAGCGCCTGTCACGAGATGCATTACGAACCCAACTGGACAGCGCCGGTTATCGCCATGTTGACCAGGTGATGGAGCACGGCGAATACGCCACGCGCGGCGCGTTGCTGGATCTCTTCCCGATGGGGAGTGAGCTGCCTTATCGTCTTGATTTCTTTGATGATGAAATCGACAGCCTGCGGGTGTTTGACGTCGACAGCCAGCGCACGCTGGAGGAAGTAGAAGCGATCAATCTGCTGCCCGCGCACGAATTTCCGACCGATAAAGCGGCAATTGAACTGTTCCGCAGCCAGTGGCGCGATACCTTCGAAGTGAAGCGCGATCCAGAACATATTTACCAGCAAGTGAGTAAAGGCACATTACCTGCCGGGATCGAGTACTGGCAGCCATTGTTCTTCAGCGAACCACTGCCGCCGCTGTTCAGTTATTTCCCTGCCAATACCTTGCTCGTGAATACTGGCGATCTGGAAACCAGTGCCGAACGTTTCCAGGCTGACACGCTGGCGCGTTTTGAGAATCGCGGCGTCGATCCGATGCGCCCGCTGTTGCCACCACAATCGCTCTGGCTGCGGGTGGACGAGCTCTTCTCAGAGCTGAAAAACTGGCCCCGGGTGCAGCTAAAAACTGAACATTTACCGACAAAAGCCGCGAATGCCAATTTAGGTTTCCAGAAACTGCCAGACCTGGCCGTTCAGGCACAACAAAAAGCGCCGCTGGATGCGCTGCGTAAGTTCCTCGAGACTTTCGACGGTCCGGTGGTGTTCTCGGTAGAAAGTGAAGGTCGCCGTGAAGCGCTGGGTGAACTGCTCGCACGAATTAAAATTGCTCCGCAACGCATTATGCGTCTTGATGAAGCCAGCGACCGTGGGCGTTATCTGATGATTGGCGCTGCCGAACATGGTTTTGTCGATACGGTGCGTAATCTGGCGCTGATTTGCGAAAGCGATCTGCTCGGTGAACGCGTTGCCCGTCGTCGTCAGGATTCTCGCCGCACCATCAACCCCGATACACTGATCCGTAACCTTGCGGAACTGCATATTGGTCAGCCGGTGGTCCATCTGGAGCACGGCGTCGGTCGTTATGCCGGAATGACCACGCTGGAAGCGGGTGGCATTACTGGCGAGTATCTGATGCTCACCTATGCCAACGACGCCAAACTGTATGTTCCGGTGTCGTCACTGCATCTGATTAGCCGTTACGCAGGTGGCGCGGAAGAAAACGCCCCGCTGCATAAACTTGGCGGCGATGCGTGGTCACGCGCGCGGCAGAAAGCGGCGGAAAAAGTGCGTGATGTGGCGGCGGAATTGCTGGATATCTACGCGCAACGCGCCGCCAAAGAGGGCTTCGCGTTTAAACACGATCGTGAGCAGTATCAGTTGTTCTGCGACAGCTTCCCGTTTGAAACCACGCCGGATCAGGCGCAGGCCATTAATGCGGTACTTAGCGACATGTGTCAGCCGCTGGCAATGGATCGTCTGGTGTGCGGCGATGTTGGCTTTGGTAAAACAGAAGTGGCGATGCGCGCAGCTTTCCTGGCAGTAGATAACCACAAGCAGGTGGCGGTGCTGGTGCCTACCACCCTTCTCGCGCAGCAGCATTACGACAACTTCCGCGACCGTTTCGCCAACTGGCCGGTACGTATCGAAATGATCTCCCGTTTCCGCAGCGCCAAAGAGCAGACGCAAATCCTTGCGGAAGTGGCGGAAGGGAAAATCGATATTCTGATCGGTACGCACAAACTGCTGCAAAGTGACGTCAAGTTTAAAGATTTAGGCCTGCTGATTGTCGATGAAGAACACCGCTTCGGGGTGCGTCATAAAGAGCGCATTAAAGCGATGCGCGCGAACGTGGATATTCTGACGCTTACTGCAACGCCGATCCCACGTACGCTGAATATGGCAATGAGCGGAATGCGTGACCTGTCGATTATCGCCACGCCGCCCGCCCGTCGTCTGGCAGTTAAAACCTTTGTCCGTGAGTATGACAGCATGGTGGTCCGGGAGGCGATCCTGCGTGAAATTTTGCGCGGAGGACAGGTTTATTATCTCTACAATGATGTGGAAAACATTCAGAAAGCCGCCGAACGGCTGGCAGAACTGGTGCCAGAAGCGCGGATCGCCATCGGTCACGGGCAGATGCGCGAGCGCGAACTGGAACGGGTGATGAATGATTTCCATCATCAACGTTTCAACGTGCTGGTTTGTACAACCATTATCGAAACCGGGATCGACATCCCGACAGCCAACACTATTATCATTGAACGCGCGGATCACTTCGGTCTGGCGCAGCTGCACCAGTTACGCGGTCGCGTCGGACGTTCGCATCATCAGGCATATGCATGGTTGCTGACACCGCATCCAAAAGCGATGACTACCGATGCACAAAAACGTCTTGAAGCAATTGCCTCGCTGGAAGATCTCGGGGCAGGTTTTGCGCTGGCAACGCACGATCTGGAGATTCGCGGCGCGGGTGAACTGCTTGGCGAAGAACAAAGCGGCTCAATGGAAACCATCGGTTTCTCGCTGTATATGGAGTTGCTGGAAAACGCCGTCGATGCACTGAAAGCCGGACGCGAGCCGTCGCTGGAAGATCTCACCAGCCAGCAAACAGAAGTCGAGCTGCGGATGCCGTCGCTATTGCCAGATGATTTCATCCCTGACGTGAACACGCGTCTGTCGTTCTACAAACGTATTGCCAGCGCCAAAACGGAAAACGAACTGGAAGAGATCAAAGTCGAGCTTATCGATCGCTTCGGCCTGCTGCCAGATCCGGCGCGTACCCTGCTGGATATTGCCCGTCTGCGCCAGCAAGCGCAGAAACTGGGGATCAGGAAGCTGGAAGGTAATGAGAAAGGCGGGGTGATCGAATTTGCCGAGAAGAATCACGTTAATCCGGCCTGGTTGATTGGTTTGCTGCAAAAACAGCCGCAGCATTACCGCCTTGATGGTCCGACGCGCCTGAAATTTATTCAGGATTTGAGTGAGCGGAAAACGCGTATCGAATGGGTACGCCAGTTTATGCGTGAACTGGAAGAGAACGCGATCGCTTAA", 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"MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESEGRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDTVRNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSMVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIEFAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENAIA", 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"ATGGGACAGAGTAAAAAATTGAATAAACAACCGAGTTCGCTTTCACCGCTGGTGCAATTGGCGGGAATTCGCAAATGCTTTGATGGTAAAGAGGTCATTCCCCAGCTGGATCTGACTATCAACAATGGCGAGTTCCTCACGCTGCTTGGCCCTTCTGGCTGCGGTAAAACAACCGTTCTTCGCCTGATTGCAGGTCTGGAAACTGTTGATTCCGGACGCATCATGCTGGATAACGAGGACATCACCCACGTTCCGGCGGAAAACCGCTATGTGAACACTGTTTTCCAAAGCTACGCACTTTTCCCCCACATGACCGTGTTCGAAAATGTGGCCTTTGGGTTGCGCATGCAAAAAACCCCCGCTGCTGAAATTACGCCCCGCGTGATGGAAGCCCTGCGGATGGTGCAGTTGGAAACCTTCGCTCAACGCAAACCGCATCAGCTCTCTGGTGGTCAACAGCAACGCGTCGCCATTGCTCGCGCGGTGGTTAACAAGCCTCGTCTGTTGTTGCTGGATGAGTCGCTCTCAGCGCTGGATTACAAACTGCGTAAGCAAATGCAGAACGAGCTGAAAGCGTTACAGCGTAAGCTTGGCATTACATTCGTCTTTGTGACTCACGACCAGGAAGAAGCACTCACCATGTCAGACAGGATTGTGGTGATGCGCGATGGTCGCATTGAGCAAGACGGCACGCCGCGTGAAATCTACGAAGAGCCGAAAAACCTGTTTGTTGCCGGCTTCATTGGCGAAATCAATATGTTTAACGCCACTGTCATCGAACGTCTAGACGAGCAGCGCGTACGCGCCAACGTTGAAGGCCGCGAATGTAATATCTACGTTAACTTCGCCGTTGAACCGGGGCAAAAACTGCATGTTCTGCTGCGCCCGGAAGACTTACGTGTTGAAGAGATTAACGACGACAACCACGCTGAAGGGCTGATTGGTTACGTTCGCGAGCGTAACTACAAAGGCATGACGCTGGAGTCGGTTGTTGAACTGGAAAATGGCAAGATGGTGATGGTCAGCGAATTCTTCAATGAAGACGATCCTGACTTTGACCACTCTCTCGACCAAAAAATGGCCATTAATTGGGTAGAAAGCTGGGAGGTCGTACTGGCTGATGAAGAACACAAGTAA", 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"UniProtKB/Swiss-Prot:P27431" + ], + [ + "gene_synonym", + "GI:90111217" + ], + [ + "gene_synonym", + "b1128" + ], + [ + "gene_synonym", + "ycfD" + ], + [ + "gene_synonym", + "roxA" + ], + [ + "gene_synonym", + "GeneID:945391" + ], + [ + "gene_synonym", + "ASAP:ABE-0003802" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK1115" + ], + [ + "gene_synonym", + "EcoGene:EG10732" + ], + [ + "gene_synonym", + "GI:16129092" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23837" + ], + [ + "gene_synonym", + "b1129" + ], + [ + "gene_synonym", + "ASAP:ABE-0003805" + ] + ], + "dna_sequence": 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"MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSIIDMNPSSTLAVFGGSEANLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSAKGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQSPQVQAKVRATLLAGIRAAVLWHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG11344" + ], + [ + "gene_synonym", + "trmU" + ], + [ + "gene_synonym", + "mnmA" + ], + [ + "gene_synonym", + "GeneID:945690" + ], + [ + "gene_synonym", + "JW1119" + ], + [ + "gene_synonym", + "asuE" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25745" + ], + [ + "gene_synonym", + "ECK1119" + ], + [ + "gene_synonym", + "GI:90111218" + ], + [ + "gene_synonym", + "b1133" + ], + [ + "gene_synonym", + "ycfB" + ], + [ + "gene_synonym", + "NP_415651.4" + ], + [ + "gene_synonym", + "ASAP:ABE-0003815" + ] + ], + "dna_sequence": 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binding protein" + ], + "id": "CDS_1137", + "location": [ + [ + "NC_000913", + 1210346, + "+", + 834 + ] + ], + "md5": "98627fe30a9b0ebe29d1db295097a438", + "parent_gene": "", + "protein_md5": "c5ecccb07fa1d41bf21a63f418aa50e5", + "protein_translation": "MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVVVYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK1146" + ], + [ + "gene_synonym", + "icdC" + ], + [ + "gene_synonym", + "JW5173" + ], + [ + "gene_synonym", + "ASAP:ABE-0285040" + ], + [ + "gene_synonym", + "icd" + ], + [ + "gene_synonym", + "EcoGene:EG10009" + ], + [ + "gene_synonym", + "GeneID:4056026" + ], + [ + "gene_synonym", + "b4519" + ] + ], + "dna_sequence": 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"MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLCIYERCALFGVLGAALIGAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFATCDFMVRFPEWLPLDKWVPQVFVASGDCAERQWDFLGLEMPQWLLGIFIAYLIVAVLVVISQPFKAKKRDLFGR", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:944822" + ], + [ + "gene_synonym", + "GI:16129149" + ], + [ + "gene_synonym", + "EcoGene:EG11392" + ], + [ + "gene_synonym", + "NP_415704.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFA7" + ], + [ + "gene_synonym", + "nhaB" + ], + [ + "gene_synonym", + "ASAP:ABE-0003984" + ], + [ + "gene_synonym", + "ECK1174" + ], + [ + "gene_synonym", + "JW1175" + ], + [ + "gene_synonym", + "b1186" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK1181" + ], + [ + "gene_synonym", + "GI:90111231" + ], + [ + "gene_synonym", + "b1193" + ], + [ + "gene_synonym", + "JW5821" + ], + [ + "gene_synonym", + "mltE" + ], + [ + "gene_synonym", + "sltZ" + ] + ], + "dna_sequence": "GTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGATGCAGTGGATGCCAATAAGCCAGAAAGCCGGTGCAGCCTGGGGCGTCGATCCACAATTGATCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAA", + "dna_sequence_length": 612, + "functions": [ + "lytic murein endotransglycosylase E" + ], + "id": "CDS_1174", + "location": [ + [ + "NC_000913", + 1243180, + "+", + 612 + ] + ], + "md5": "311e34a92f8e6234d092010a4c61a98b", + "parent_gene": "", + "protein_md5": "889132211d26295415f52e15bd7590c8", + "protein_translation": "MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEPTTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSDRKKAISKINDLDADEFLEHVARNHPAPQAPRYIYKLEQALDAM", + "protein_translation_length": 203, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004009" + ], + [ + "gene_synonym", + "GI:16129157" + ], + [ + "gene_synonym", + "JW1183" + ], + [ + "gene_synonym", + "ycgR" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76010" + ], + [ + "gene_synonym", + "ECK1182" + ], + [ + "gene_synonym", + "NP_415712.1" + ], + [ + "gene_synonym", + "EcoGene:EG13899" + ], + [ + "gene_synonym", + "GeneID:947609" + ], + [ + "gene_synonym", + "b1194" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P76012" + ], + [ + "gene_synonym", + "GeneID:945761" + ], + [ + "gene_synonym", + "EcoGene:EG14275" + ], + [ + "gene_synonym", + "ECK1184" + ], + [ + "gene_synonym", + "b1196" + ] + ], + "dna_sequence": "GTGATTCAGAAAATAAATATTTTAGACAGTAGCCAGTCAGGCGTTAAAAATGGGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTGAACATTTAGAATTGATCAATCCTTCTGGCAGATTAAGCCAAAATACCCGTTCGGCAATGCTTCAGTTACGCGAAGAGGAATGGTCTGAATTCTTTTTTTGGTTGCTAAATTCTCTGGAGTGTCTGGATTATGTGATTATTAATTTAACTCCAGAAAGCAAAAAAACGTTGATGAGTGAACACCGTAACAATATTCAGGTAGCAATTGATGCTTTATATAGCCAACGTCGGCGTAAATCGCCGGGTGATGAAAGTGAAACACTTACCCGTAGAAATGACGCTATCTTCGGCAACCACGTATGGCAAACATTTGCGCAATACTTCCCGCCAGGACTTGAAAAACCGTCTGTGTAG", + "dna_sequence_length": 441, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1177", + "location": [ + [ + "NC_000913", + 1245160, + "+", + 441 + ] + ], + "md5": "338f18b610bb359a37f57ff428743a07", + "parent_gene": "", + "protein_md5": "1a7b95cc54c14563386ef591bdbf4c02", + "protein_translation": 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"MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLTLEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASSIAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE", + "protein_translation_length": 210, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76015" + ], + [ + "gene_synonym", + "GeneID:945747" + ], + [ + "gene_synonym", + "GI:162135900" + ], + [ + "gene_synonym", + "ASAP:ABE-0004029" + ], + [ + "gene_synonym", + "dhaK" + ], + [ + "gene_synonym", + "b1200" + ], + [ + "gene_synonym", + "ycgT" + ], + [ + "gene_synonym", + "ptsD" + ], + [ + "gene_synonym", + "dhaK1" + ], + [ + "gene_synonym", + "EcoGene:EG13901" + ], + [ + "gene_synonym", + "ECK1188" + ], + [ + "gene_synonym", + "NP_415718.6" + ], + [ + "gene_synonym", + "JW5187" + ] + ], + "dna_sequence": "ATGAAAAAATTGATCAATGATGTGCAAGACGTACTGGACGAACAACTGGCAGGACTGGCGAAAGCGCATCCATCGCTGACACTGCATCAGGATCCGGTGTATGTCACCCGAGCTGATGCCCCTGTTGCAGGAAAAGTCGCCCTGCTGTCGGGTGGCGGCAGCGGACACGAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCGACGCCCGATAAAATCTTTGAATGCGCCATGCAAGTTGATGGCGGCGAAGGTGTACTGTTGATTATCAAAAATTACACCGGCGATATTCTTAACTTTGAAACAGCGACCGAGTTACTGCACGATAGCGGCGTAAAAGTGACCACTGTGGTCATTGATGACGACGTTGCGGTAAAAGACAGTCTTTATACTGCCGGGCGACGCGGCGTTGCCAACACCGTATTAATTGAAAAACTCGTAGGCGCAGCGGCGGAGCGTGGCGACTCACTGGACGCCTGTGCGGAACTGGGGCGTAAGCTGAATAATCAAGGCCACTCAATAGGTATCGCTCTCGGTGCCTGTACCGTTCCTGCCGCGGGCAAACCTTCTTTTACCCTGGCGGATAATGAGATGGAGTTTGGCGTCGGCATTCATGGTGAGCCGGGTATTGACCGCCGCCCCTTCTCTTCCCTTGATCAAACCGTCGATGAAATGTTCGACACCCTGCTGGTAAATGGCTCATACCATCGCACTTTGCGTTTCTGGGATTATCAACAAGGCAGTTGGCAGGAAGAACAACAAACCAAACAACCGCTCCAGTCTGGCGATCGGGTGATTGCGCTGGTTAACAATCTTGGCGCAACTCCGCTTTCTGAGCTGTACGGCGTCTATAACCGCCTGACCACACGTTGCCAGCAAGCGGGATTGACTATCGAACGTAATTTAATTGGCGCGTACTGCACCTCACTGGATATGACCGGTTTCTCAATCACCTTACTGAAAGTTGATGACGAAACGCTGGCACTCTGGGACGCCCCGGTCCACACCCCGGCCCTTAACTGGGGTAAATAA", 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hydrolase" + ], + "id": "CDS_1185", + "location": [ + [ + "NC_000913", + 1258513, + "-", + 585 + ] + ], + "md5": "f125cd44c2b265e8a6f84b8e59ce19fa", + "parent_gene": "", + "protein_md5": "eba443ca69331a4b5ece478681d63b3a", + "protein_translation": "MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ", + "protein_translation_length": 194, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:945762" + ], + [ + "gene_synonym", + "GI:16129168" + ], + [ + "gene_synonym", + "ASAP:ABE-0004049" + ], + [ + "gene_synonym", + "JW1196" + ], + [ + "gene_synonym", + "b1205" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB49" + ], + [ + "gene_synonym", + "EcoGene:EG11533" + ], + [ + "gene_synonym", + "ECK1193" + ], + [ + "gene_synonym", + "ychH" + ], + [ + "gene_synonym", + "NP_415723.1" + ] + ], + "dna_sequence": 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"protein_translation": "MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_415740.1" + ], + [ + "gene_synonym", + "EcoGene:EG10646" + ], + [ + "gene_synonym", + "narX" + ], + [ + "gene_synonym", + "GeneID:945788" + ], + [ + "gene_synonym", + "JW1213" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFA2" + ], + [ + "gene_synonym", + "GI:16129185" + ], + [ + "gene_synonym", + "narR" + ], + [ + "gene_synonym", + "b1222" + ], + [ + "gene_synonym", + "ECK1216" + ], + [ + "gene_synonym", + "frdR" + ], + [ + "gene_synonym", + "ASAP:ABE-0004099" + ] + ], + "dna_sequence": "ATGCTTAAACGTTGTCTCTCTCCGCTCACCCTGGTTAATCAGGTTGCGCTTATTGTGTTGCTTTCTACTGCTATTGGACTGGCAGGGATGGCGGTTTCTGGCTGGCTGGTGCAAGGCGTTCAGGGCAGCGCCCATGCGATCAACAAAGCGGGATCGCTGCGCATGCAAAGTTACCGTCTGTTGGCGGCAGTGCCATTAAGCGAGAAAGACAAGCCCTTAATTAAAGAGATGGAACAAACGGCATTTAGCGCCGAGTTGACTCGAGCAGCAGAACGAGACGGACAACTGGCGCAATTACAGGGTTTACAAGATTACTGGCGTAATGAACTGATCCCTGCGCTGATGCGTGCACAAAACCGAGAAACGGTGTCAGCGGATGTCAGCCAGTTTGTTGCCGGGCTTGATCAACTGGTATCTGGTTTTGACCGCACCACGGAAATGCGCATCGAGACAGTGGTACTGGTCCATCGGGTAATGGCGGTATTTATGGCACTTTTACTGGTGTTCACTATTATCTGGTTGCGGGCGCGACTGCTACAACCGTGGCGGCAACTGCTGGCAATGGCGAGTGCCGTCAGTCATCGCGATTTTACCCAACGCGCAAACATCAGCGGGCGCAACGAAATGGCGATGCTTGGAACTGCGTTGAACAATATGTCTGCAGAACTGGCCGAAAGTTATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAACCCTGCTACGTGATATCGAATTGCGGGTGTATGACACTGATGATGAAGAGAATCATCAGGAGTTTACCTGCCAGCCAGATATGACTTGTGATGATAAAGGCTGCCAGCTCTGCCCGCGCGGCGTATTACCCGTTGGTGATCGCGGCACGACCCTGAAGTGGCGGCTGGCTGACTCTCATACGCAGTACGGTATTTTGCTGGCGACCCTGCCGCAGGGGCGTCATCTTAGCCATGATCAACAACAACTGGTGGATACCCTGGTTGAACAACTCACCGCCACGCTGGCGCTGGATCGCCATCAGGAACGTCAGCAACAGTTGATCGTGATGGAAGAGCGTGCCACCATTGCGCGCGAACTGCATGATTCTATTGCCCAATCTCTCTCTTGCATGAAGATGCAGGTGAGTTGTTTACAGATGCAGGGCGATGCGCTGCCAGAAAGCAGCCGCGAACTGTTAAGTCAGATCCGTAACGAACTGAATGCATCCTGGGCGCAGTTGCGTGAATTGCTCACCACATTCCGCTTGCAGCTCACCGAGCCTGGATTACGTCCGGCGCTGGAGGCGAGTTGCGAAGAGTACAGCGCCAAATTTGGCTTCCCGGTGAAGCTGGATTATCAATTGCCGCCTCGCCTGGTGCCTTCGCATCAGGCAATCCACTTGTTGCAAATTGCCCGTGAGGCATTAAGTAACGCCCTCAAACATTCGCAAGCGAGTGAAGTCGTGGTGACGGTGGCGCAAAACGATAATCAGGTCAAACTGACCGTCCAGGATAACGGCTGCGGCGTGCCTGAAAATGCCATCCGCAGCAATCACTACGGCATGATAATAATGCGCGATCGTGCGCAAAGTTTACGAGGCGATTGCCGCGTCCGCCGTCGTGAATCAGGTGGCACCGAAGTGGTGGTCACCTTTATTCCCGAAAAAACTTTCACAGACGTCCAAGGAGATACCCATGAGTAA", 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"type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG10642" + ], + [ + "gene_synonym", + "GeneID:945783" + ], + [ + "gene_synonym", + "GI:16129186" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10903" + ], + [ + "gene_synonym", + "JW1214" + ], + [ + "gene_synonym", + "NP_415741.1" + ], + [ + "gene_synonym", + "b1223" + ], + [ + "gene_synonym", + "narK" + ], + [ + "gene_synonym", + "ECK1217" + ], + [ + "gene_synonym", + "ASAP:ABE-0004111" + ] + ], + "dna_sequence": 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"ASAP:ABE-0004119" + ], + [ + "gene_synonym", + "GI:16129187" + ], + [ + "gene_synonym", + "chlC" + ], + [ + "gene_synonym", + "JW1215" + ], + [ + "gene_synonym", + "NP_415742.1" + ], + [ + "gene_synonym", + "b1224" + ], + [ + "gene_synonym", + "ECK1218" + ], + [ + "gene_synonym", + "narG" + ], + [ + "gene_synonym", + "narC" + ], + [ + "gene_synonym", + "EcoGene:EG10638" + ] + ], + "dna_sequence": "ATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGCCGATGGGCATGGCCAGCTTCTCAATACCAACCGTGACTGGGAGGATGGATATCGCCAGCGTTGGCAGCATGACAAAATCGTCCGCTCTACCCACGGGGTAAACTGCACCGGCTCCTGCAGCTGGAAAATCTACGTCAAAAACGGTCTGGTCACCTGGGAAACCCAGCAGACTGACTATCCGCGTACCCGTCCGGATCTGCCAAACCATGAACCTCGCGGCTGCCCGCGCGGTGCCAGCTACTCCTGGTATCTTTACAGTGCCAACCGCCTGAAATACCCGATGATGCGCAAACGCCTGATGAAAATGTGGCGTGAAGCGAAGGCGCTGCATAGCGATCCGGTTGAGGCATGGGCTTCTATCATTGAAGACGCCGATAAAGCGAAAAGCTTTAAGCAGGCGCGTGGACGCGGTGGATTTGTTCGTTCTTCCTGGCAGGAGGTGAACGAACTGATCGCCGCATCTAACGTTTACACCATCAAAAACTACGGCCCGGACCGTGTTGCTGGTTTCTCGCCAATTCCGGCAATGTCGATGGTTTCTTACGCATCGGGTGCACGCTATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCTGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCAGACGCGTACCCCGGATGCTCACTTCTTTACTGAAGTGCGTTACAAAGGGACCAAAACTGTTGCCGTCACACCAGACTACGCTGAAATCGCCAAACTGTGCGATCTGTGGCTGGCACCGAAACAGGGCACCGATGCGGCAATGGCGCTGGCGATGGGCCACGTAATGCTGCGTGAATTCCACCTCGACAACCCAAGCCAGTATTTCACCGACTATGTGCGTCGCTACACCGACATGCCGATGCTGGTGATGCTGGAAGAACGCGACGGTTACTACGCTGCAGGTCGTATGCTGCGCGCTGCTGATCTGGTTGATGCGCTGGGCCAGGAAAACAATCCGGAATGGAAAACTGTCGCCTTTAATACCAATGGCGAAATGGTTGCGCCGAACGGTTCTATTGGCTTCCGCTGGGGCGAGAAGGGCAAATGGAATCTTGAGCAGCGCGACGGCAAAACTGGCGAAGAAACCGAGCTGCAACTGAGCCTGCTGGGTAGCCAGGATGAGATCGCTGAGGTAGGCTTCCCGTACTTTGGTGGCGACGGCACGGAACACTTCAACAAAGTGGAACTGGAAAACGTGCTGCTGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTACGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGATTACCGGCGTTTCTCGCAGCCAGATTATTCGCATCGCCCGTGAATTTGCCGATAACGCTGATAAAACGCACGGTCGTTCGATGATTATCGTCGGTGCGGGGCTGAACCACTGGTATCACCTCGATATGAACTATCGTGGTCTGATCAACATGCTGATTTTCTGCGGCTGTGTCGGTCAGAGCGGGGGCGGCTGGGCGCACTATGTAGGTCAGGAAAAACTGCGTCCGCAAACCGGCTGGCAGCCGCTGGCGTTTGCCCTTGACTGGCAGCGTCCGGCGCGTCACATGAACAGCACTTCTTATTTCTATAACCACTCCAGCCAGTGGCGTTATGAAACCGTCACGGCGGAAGAGTTGCTGTCACCGATGGCGGACAAATCCCGCTATACCGGACACTTGATCGACTTTAACGTCCGTGCGGAACGCATGGGCTGGCTGCCGTCTGCACCGCAGTTAGGCACTAACCCGCTGACTATCGCTGGCGAAGCGGAAAAAGCCGGGATGAATCCGGTGGACTATACGGTGAAATCCCTGAAAGAGGGTTCCATCCGTTTTGCGGCAGAACAACCAGAAAACGGTAAAAACCACCCGCGCAACCTGTTCATCTGGCGTTCTAACCTGCTCGGTTCTTCCGGTAAAGGTCATGAGTTTATGCTCAAGTACCTGCTGGGGACGGAGCACGGTATCCAGGGTAAAGATCTGGGGCAACAGGGCGGCGTGAAGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATCTACAAAGCCATCGCGAAGAAATTCTCCGAAGTGTGCGTCGGCCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCATGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACACCAAAGCGGAAGGTCCGGCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCACCAGTGGATGCGTGATTTCGGTGAAAGCCTGCTGGTTTATCGTCCGCCGATCGACACCCGTTCGGTGAAAGAAGTGATAGGCCAGAAATCCAACGGCAACCAGGAAAAAGCGCTCAACTTCCTGACGCCGCACCAGAAGTGGGGTATCCACTCCACCTACAGCGACAACCTGCTGATGCTGACTTTAGGTCGCGGTGGTCCGGTGGTCTGGTTGAGTGAAGCCGATGCCAAAGATCTGGGTATCGCCGATAACGACTGGATTGAAGTCTTCAACAGCAACGGTGCTCTGACTGCCCGTGCGGTTGTCAGCCAGCGTGTTCCGGCAGGGATGACCATGATGTACCACGCGCAGGAACGTATCGTTAACCTGCCTGGTTCGGAAATTACCCAACAGCGTGGTGGTATCCATAACTCGGTCACCCGTATCACGCCGAAACCGACGCATATGATCGGCGGCTATGCCCATCTGGCATACGGCTTTAACTACTATGGCACCGTAGGTTCTAACCGCGATGAGTTTGTTGTAGTGCGTAAGATGAAGAACATTGACTGGTTAGATGGCGAAGGCAATGACCAGGTACAGGAGAGCGTAAAATGA", 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"MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGHLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKSNGNQEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEVFNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIGGYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQVQESVK", + "protein_translation_length": 1247, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:945780" + ], + [ + "gene_synonym", + "b1225" + ], + [ + "gene_synonym", + "GI:16129188" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11349" + ], + [ + "gene_synonym", + "chlC" + ], + [ + "gene_synonym", + "JW1216" + ], + [ + "gene_synonym", + "narH" + ], + [ + "gene_synonym", + "ECK1219" + ], + [ + "gene_synonym", + "ASAP:ABE-0004121" + ], + [ + "gene_synonym", + "EcoGene:EG10639" + ], + [ + "gene_synonym", + "NP_415743.1" + ] + ], + "dna_sequence": 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"ATGAAAACCGTTAGGGAGTCCACAACGTTGTACAACTTTCTCGGATCGCACAATCCATACTGGCGGTTGACGGAAAGCAGCGATGTTTTGCGCTTTTCTACCACCGAAACCACAGAACCTGATCGTACATTGCAGTTATCTGCCGAACAGGCTGCTCGCATCAGGGAAATGACGGTCATCACCTCCAGCCTGATGATGAGTCTGACCGTCGATGAAAGCGATCTTTCTGTGCATCTGGTAGGACGAAAAATCAATAAACGGGAATGGGCTGGCAACGCGTCTGCATGGCATGACACACCGGCGGTTGCTCGTGATTTATCACACGGGCTTTCCTTTGCTGAGCAGGTAGTTTCTGAAGCACATTCCGCAATAGTGATTCTCGACAGCCGGGGGAATATCCAACGCTTCAATCGGTTATGTGAAGATTACACAGGGTTGAAAGAACACGACGTCATTGGGCAAAGCGTGTTTAAACTGTTTATGAGCCGTCGTGAAGCTGCGGCATCCAGGCGCAATAACCGTGTATTTTTTCGAAGCGGCAATGCATATGAAGTCGAACTGTGGATACCAACATGTAAAGGCCAGCGGCTGTTTCTGTTTCGCAATAAATTTGTCCACAGCGGCAGTGGCAAAAACGAGATTTTTTTAATCTGTTCCGGCACCGACATTACCGAAGAGCGCCGCGCTCAGGAGCGACTGCGTATTCTGGCAAATACCGACAGTATCACCGGACTGCCGAATCGTAACGCAATGCAGGATTTAATCGATCACGCTATTAATCATGCAGATAACAATAAAGTTGGGGTTGTGTATCTTGATTTGGATAATTTCAAAAAGGTCAACGACGCCTATGGGCATTTGTTTGGTGACCAGTTATTACGCGACGTGTCATTGGCTATTTTAAGCTGTCTCGAACATGACCAGGTGTTGGCGCGTCCAGGTGGGGATGAGTTTCTGGTACTGGCATCCAACACCTCACAAAGCGCGCTGGAAGCAATGGCATCACGAATTTTGACCCGCTTACGGCTCCCCTTTCGCATTGGTTTAATTGAAGTTTATACCAGCTGTTCAGTAGGTATTGCACTCTCTCCCGAACATGGTTCAGACAGCACGGCTATTATTCGTCACGCCGACACAGCAATGTACACAGCGAAGGAAGGCGGACGAGGACAATTTTGCGTTTTTACCCCAGAAATGAATCAACGGGTATTTGAATATCTCTGGCTGGATACCAACTTGCGTAAAGCACTGGAAAACGATCAGTTGGTTATTCACTATCAACCGAAAATCACCTGGCGTGGCGAAGTGCGCAGTCTGGAAGCACTAGTACGTTGGCAGTCACCTGAACGTGGGTTGATTCCACCGTTGGACTTCATTTCCTACGCCGAAGAGTCAGGGCTAATTGTGCCTTTAGGCCGTTGGGTGATTCTCGATGTCGTACGCCAGGTGGCAAAGTGGCGGGATAAAGGCATAAACCTGCGAGTGGCGGTAAATATTTCTGCACGTCAGCTCGCCGATCAAACCATTTTCACCGCCCTGAAACAGGTTCTCCAGGAACTCAATTTTGAATACTGCCCTATAGATGTTGAACTGACAGAGAGTTGTCTGATTGAGAATGATGAACTGGCACTGTCTGTTATTCAACAATTTAGCCAACTAGGTGCGCAAGTGCATCTGGATGATTTTGGTACCGGCTACTCTTCACTTTCGCAACTGGCGCGCTTTCCGATCGATGCCATCAAACTTGACCAGGTTTTTGTTCGAGATATTCACAAACAACCTGTCTCGCAGTCACTGGTCCGGGCGATCGTCGCTGTGGCCCAGGCATTGAATCTTCAGGTGATCGCCGAAGGTGTAGAGAGTGCAAAGGAAGATGCTTTTTTAACCAAGAACGGGATCAATGAGCGGCAAGGATTTTTGTTTGCCAAACCGATGCCCGCCGTCGCCTTCGAACGCTGGTATAAACGCTATCTGAAGCGCGCATAA", 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"UniProtKB/Swiss-Prot:P0AGH3" + ], + [ + "gene_synonym", + "GeneID:946191" + ] + ], + "dna_sequence": 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"GI:16129255" + ], + [ + "gene_synonym", + "NP_415810.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47622" + ], + [ + "gene_synonym", + "b1294" + ] + ], + "dna_sequence": 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"protein_translation": "MNHDIPLKYFDIADEYATECAEPVAEAERTPLAHYFQLLLTRLMNNEEISEEAQHEMAAEAGINPVRIDEIAEFLNQWGNE", + "protein_translation_length": 81, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG13907" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76037" + ], + [ + "gene_synonym", + "b1296" + ], + [ + "gene_synonym", + "GI:90111243" + ], + [ + "gene_synonym", + "JW1289" + ], + [ + "gene_synonym", + "NP_415812.4" + ], + [ + "gene_synonym", + "ECK1291" + ], + [ + "gene_synonym", + "ycjJ" + ], + [ + "gene_synonym", + "puuP" + ], + [ + "gene_synonym", + "ASAP:ABE-0004362" + ], + [ + "gene_synonym", + "GeneID:946287" + ] + ], + "dna_sequence": 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"ATGGAAAATATAATGAACAATCCGGTTATCGGTGTCGTAATGTGCAGGAACAGGCTTAAGGGTCATGCGACCCAGACTCTGCAAGAAAAGTACCTGAATGCCATCATCCATGCAGGCGGCTTGCCTATTGCGCTACCACATGCGCTGGCGGAACCGTCATTACTTGAACAACTTTTGCCGAAACTCGATGGCATTTATCTTCCTGGTAGTCCCAGCAATGTGCAGCCGCACCTATATGGTGAAAACGGCGATGAGCCTGACGCCGATCCCGGGCGTGATCTTCTGAGCATGGCGATAATTAATGCCGCACTCGAAAGGCGCATCCCCATTTTCGCCATCTGCCGGGGTTTACAAGAACTGGTGGTGGCAACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATGCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATGGACAAGGGGCGAAGGTCGTTAGCCCACGGTTGCGTGTTGAAGCTCGCTCGCCGGATGGCTTAGTTGAGGCGGTTAGCGTCATCAATCATCCTTTTGCGCTGGGCGTACAGTGGCACCCGGAATGGAACAGTAGCGAGTACGCGCTTTCGCGTATATTGTTCGAGGGCTTTATCACCGCTTGTCAGCACCATATCGCTGAAAAACAGCGACTCTGA", + "dna_sequence_length": 765, + "functions": [ + "gamma-glutamyl-gamma-aminobutyrate hydrolase" + ], + "id": "CDS_1283", + "location": [ + [ + "NC_000913", + 1361120, + "+", + 765 + ] + ], + "md5": 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"gene_synonym", + "GeneID:945659" + ], + [ + "gene_synonym", + "ASAP:ABE-0004400" + ], + [ + "gene_synonym", + "GI:90111247" + ], + [ + "gene_synonym", + "EcoGene:EG13910" + ], + [ + "gene_synonym", + "JW1302" + ], + [ + "gene_synonym", + "ECK1304" + ], + [ + "gene_synonym", + "ycjM" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW1306" + ] + ], + "dna_sequence": "ATGAAAAAGTTAGTAGCCACAGCACCGCGTGTTGCTGCGCTGGTTGAGTATGAAGATCGGGCGATTTTAGCTAATGAAGTGAAGATCCGCGTGCGTTTCGGCGCACCGAAACACGGAACGGAAGTGGTCGACTTCCGCGCCGCCAGCCCGTTTATTGATGAAGACTTTAACGGCGAATGGCAGATGTTCACTCCGCGTCCGGCAGATGCGCCGCGCGGCATTGAGTTTGGCAAATTCCAGCTTGGCAACATGGTGGTTGGCGACATTATCGAGTGCGGCAGCGACGTTACCGACTACGCGGTGGGCGACAGCGTATGCGGCTACGGCCCGCTCTCCGAGACGGTCATCATTAACGCAGTGAATAACTACAAGCTGCGCAAAATGCCGCAAGGCAGCTCCTGGAAAAACGCCGTCTGCTACGACCCGGCGCAGTTTGCCATGAGCGGCGTGCGCGATGCCAACGTGCGCGTAGGGGATTTTGTGGTGGTGGTAGGGCTTGGCGCAATCGGTCAAATTGCCATCCAACTGGCTAAACGCGCTGGCGCTTCTGTGGTGATTGGCGTCGATCCTATCGCCCATCGCTGTGATATTGCCCGTCGCCACGGCGCGGATTTCTGCCTTAACCCCATCGGCACTGATGTAGGTAAAGAGATCAAAACGCTGACCGGCAAGCAGGGTGCCGATGTGATTATCGAAACCAGCGGCTACGCCGACGCGCTGCAATCGGCGCTCCGCGGTCTGGCTTATGGCGGCACCATCTCCTATGTCGCGTTTGCCAAGCCGTTTGCCGAAGGTTTTAACCTCGGACGCGAAGCGCATTTCAATAACGCCAAAATTGTCTTCTCTCGCGCGTGCAGCGAACCGAACCCGGATTATCCGCGCTGGAGCCGCAAGCGTATTGAAGAAACCTGTTGGGAACTGCTGATGAACGGTTATCTCAATTGCGAAGATTTAATCGACCCGGTGGTGACCTTTGCCAATAGCCCGGAAAGCTATATGCAGTATGTCGACCAGCATCCGGAACAGAGCATCAAAATGGGCGTTACGTTTTAA", 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], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77366" + ], + [ + "gene_synonym", + "ycjU" + ], + [ + "gene_synonym", + "EcoGene:EG13918" + ], + [ + "gene_synonym", + "ASAP:ABE-0004420" + ], + [ + "gene_synonym", + "JW1310" + ], + [ + "gene_synonym", + "ECK1312" + ] + ], + "dna_sequence": "ATGAAACTGCAAGGGGTAATTTTCGATCTGGATGGTGTAATCACCGATACCGCGCATCTGCATTTCCAGGCGTGGCAGCAGATTGCCGCTGAAATTGGCATCAGCATTGATGCGCAGTTTAACGAATCCCTAAAAGGGATCAGCCGCGATGAGTCTCTGCGGCGCATTCTGCAACACGGGGGCAAAGAGGGCGACTTTAACTCGCAGGAGAGGGCGCAACTGGCGTATCGCAAAAATCTGCTCTATGTCCACTCACTACGCGAGTTGACGGTCAACGCTGTTCTACCCGGCATTCGCTCTTTGCTGGCAGATCTCCGTGCACAGCAGATCTCGGTTGGGCTGGCTTCTGTCTCCCTGAATGCGCCGACGATTTTAGCGGCGCTGGAGCTGCGCGAGTTTTTCACCTTCTGCGCGGATGCTTCCCAACTTAAAAACTCGAAACCGGACCCGGAAATCTTTCTCGCCGCCTGTGCAGGGCTGGGCGTGCCGCCGCAGGCATGTATCGGCATTGAAGATGCGCAGGCGGGCATTGACGCCATTAACGCCAGCGGTATGCGCTCGGTGGGGATCGGCGCGGGCTTAACCGGGGCGCAATTACTGTTGCCTTCAACGGAATCACTCACCTGGCCGCGGTTATCGGCCTTCTGGCAAAACGTATAG", + "dna_sequence_length": 660, + "functions": 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"UniProtKB/Swiss-Prot:P76045" + ], + [ + "gene_synonym", + "JW1312" + ], + [ + "gene_synonym", + "NP_415835.1" + ], + [ + "gene_synonym", + "EcoGene:EG13428" + ], + [ + "gene_synonym", + "ECK1315" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "b1320" + ] + ], + "dna_sequence": "ATGTCCCCTACTATTTATGATATTGCCAGGGTTGCAGGCGTATCAAAATCCACCGTATCACGCGTGCTGAATAAGCAAACTAATATCTCCCCGGAAGCGCGCGAAAAAGTGTTACGGGCCATTGAAGAATTACAGTATCAGCCAAACAAGCTGGCCCGCGCGCTGACCTCTTCGGGTTTTGATGCCATTATGGTGATTTCTACCCGTTCGACCAAAACTACGGCGGGTAATCCGTTTTTCTCTGAAGTTTTGCATGCCATCACCGCCAAAGCTGAAGAAGAAGGTTTCGACGTGATATTACAAACGTCGCACAATCCGGCAGAAGATCTGCAAAAATGCGAAAGCAAAATTAAGCAGAAAATGATTAAAGGCATTATTATGCTCAGTTCGCCAGCGGATGAGTCATTTTTTGCCCAACTCGATAAATATGATATTCCGGTGGTGGTGATTGGCAAAGTTGAAGGTCAATATGCCCATGTTTATTCTGTCGATACCGATAATTTTGGCGACAGCATTGCGTTGACCGATGCATTAATTGAAAGTGGGCATCAAAATATTGCCTGCCTGCATGCTCCGCTTGATGTCCATGTTTCGGTTGATCGCGTTAATGGTTATAAGCAGAGCCTGGCTGCGCATAATATTGCAGTGCGTGATGAATGGATTGTTGATGGCGGTTATACCCATGAAACTGCATTAAAAGCAGCACGGCAATTATTAAGCCAGTCACCGTTGCCTGAGGCGGTGTTTGCCACTGACAGCCTGAAATTAATGAGCATTTATCGTGCGGCAGCAGAGAAAAATATTGCTATTCCGCAGCAGTTAGCGGTGGTGGGTTATAGCAATGAAACGCTGTCATTTATTTTAACGCCTGCACCGGGCGGCATCGATGTTCCGACGCAGGAGTTAGGTCAACAAAGCTGCGAGTTATTATTCCGCTTAATTTCTGGAAAACCGTCACCACAGAATATTACCGTTGCCACGCATATGACGCTGAAATAA", 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family protein" + ], + "id": "CDS_1314", + "location": [ + [ + "NC_000913", + 1391853, + "-", + 921 + ] + ], + "md5": "5d0a829d9b08dcec80f04a135ebbea47", + "parent_gene": "", + "protein_md5": "222f6dd5ad5b5e8fa96c4f4148da425e", + "protein_translation": "MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEPRQLENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSIFRNGWENNVKSIDALPYVEAGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVYLTQPTQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAPFFEETL", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77333" + ], + [ + "gene_synonym", + "ASAP:ABE-0004457" + ], + [ + "gene_synonym", + "EcoGene:EG13923" + ], + [ + "gene_synonym", + "ECK1325" + ], + [ + "gene_synonym", + "JW1321" + ], + [ + "gene_synonym", + "GI:16129289" + ], + [ + "gene_synonym", + "b1328" + ], + [ + "gene_synonym", + "ycjZ" + ], + [ + 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1445880, + "+", + 327 + ] + ], + "md5": "d367b0ea126ad1f85902aebf2c8df23c", + "parent_gene": "", + "protein_md5": "e17b93cceda521326f1ff88abfa8ce51", + "protein_translation": "MKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVADINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGINGKWVRKF", + "protein_translation_length": 108, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16129345" + ], + [ + "gene_synonym", + "maoR" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47129" + ], + [ + "gene_synonym", + "GeneID:945941" + ], + [ + "gene_synonym", + "ydbM" + ], + [ + "gene_synonym", + "ECK1381" + ], + [ + "gene_synonym", + "maoX" + ], + [ + "gene_synonym", + "JW1379" + ], + [ + "gene_synonym", + "NP_415902.1" + ], + [ + "gene_synonym", + "maoB" + ], + [ + "gene_synonym", + "feaR" + ], + [ + "gene_synonym", + "ASAP:ABE-0004630" + ], + [ + "gene_synonym", + "EcoGene:EG13422" + ], + [ + "gene_synonym", + "b1384" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW1381" + ], + [ + "gene_synonym", + "NP_415904.3" + ], + [ + "gene_synonym", + "ASAP:ABE-0004639" + ], + [ + "gene_synonym", + "GI:162135920" + ], + [ + "gene_synonym", + "maoA" + ], + [ + "gene_synonym", + "ECK1383" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46883" + ], + [ + "gene_synonym", + "GeneID:945939" + ], + [ + "gene_synonym", + "b1386" + ] + ], + "dna_sequence": 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"GI:16129349" + ], + [ + "gene_synonym", + "EcoGene:EG13736" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76077" + ], + [ + "gene_synonym", + "paaA" + ], + [ + "gene_synonym", + "ECK1385" + ], + [ + "gene_synonym", + "NP_415906.1" + ] + ], + "dna_sequence": 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"ATGAATCAGTTAACGGCTTACACCTTGCGCCTGGGCGATAACTGCCTGGTGCTCTCCCAGCGGTTGGGTGAATGGTGCGGTCACGCACCGGAACTGGAAATCGATCTCGCACTGGCAAACATTGGCCTCGATTTATTAGGTCAGGCACGCAACTTCTTATCGTATGCCGCTGAATTAGCGGGAGAAGGCGATGAAGATACCCTGGCCTTCACCCGAGACGAGCGCCAGTTCAGCAACTTATTGTTGGTTGAACAACCAAACGGCAATTTTGCCGACACCATTGCACGCCAGTATTTCATCGATGCATGGCATGTGGCGCTCTTTACCCGTCTGATGGAAAGCCGTGATCCGCAACTGGCGGCGATTTCTGCCAAAGCAATTAAAGAAGCGCGCTATCACCTGCGTTTTAGTCGTGGCTGGCTGGAGCGACTGGGCAATGGTACTGACGTATCAGGGCAAAAGATGCAGCAGGCCATCAACAAGTTGTGGCGTTTTACCGCCGAACTGTTCGATGCCGACGAGATTGATATTGCACTGAGTGAAGAGGGTATTGCGGTTGATCCACGCACTTTACGCGCAGCGTGGGAAGCCGAAGTTTTTGCCGGGATCAACGAAGCCACATTGAACGTACCGCAAGAGCAGGCGTATCGCACTGGCGGTAAAAAAGGACTGCATACCGAACACCTTGGACCCATGCTGGCAGAAATGCAGTATCTCCAGCGTGTCTTGCCCGGTCAGCAATGGTAA", + "dna_sequence_length": 747, + "functions": [ + "ring 1,2-phenylacetyl-CoA epoxidase subunit" + ], + "id": "CDS_1378", + "location": [ + [ + "NC_000913", + 1455164, + "+", + 747 + ] + ], + "md5": "1e7f96f141b71f3a1d5a79eec1969aa4", + "parent_gene": 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"ATGCAAAGGAAAACTCTATTGTCGGCCTGTATTGCATTAGCTCTGAGTGGTCAGGGTTGGGCGGCAGATATCACAGAGGTAGAAACCACCACAGGTGAAAAGAAAAATACCAATGTGACTTGTCCGGCAGACCCAGGAAAACTCAGTCCGGAAGAGCTTAAACGCTTACCCTCTGAATGCTCTCCTTTAGTCGAACAAAACCTGATGCCATGGCTTTCCACAGGCGCTGCTGCGTTAATCACGGCCTTAGCCGTAGTGGAACTAAACGACGATGATGATCATCATCATCGCAACAATTCTCCACTCCCACCGACACCCCCTGATGATGAATCAGACGACACTCCAGTTCCCCCAACTCCTGGCGGAGATGAGATAATACCGGACGATCCGGATGATACGCCTACACCTCCCAAACCGGTTTCGTTTAATAATGACGTTATTCTCGATAAAACAGAAAAAACGTTAACTATTCGCGATTCAGTTTTTACTTATACCGAGAATGCTGACGGGACTATATCTCTGCAAGATAGCAATGGTCGTAAGGCAACGATTAATCTTTGGCAGATTGATGAAGCGAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATATTGTTGTTTCCGATACTGGATCGATTGGCGTGCTCATCAACGGTGAGGGGGCAACAGTATCCAATACGGGTGATGTTAACGTTAGCAATGAAGCGACAGGGTTCAGCATCACAACCAACAGTGGGAAGGTTTCGCTGGCAGGCAGTATGCAGGTTGGCGATTTCTCGACCGGGGTAGATCTTAATGGCAACAATAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGATAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAGTGAGGTTACTTCTCGTCAGAGTAATTTATTTGATGGCAGCGCAGAGAAAACGTCAGGTCTGGTTGTGATTGGCGATGGCAATACCGTTAATATGAATGGTGGACTTGAACTGATTGGAGAGAAAAACGCGCTTGCAGATGGGTCGCAGGTTACTTCCTTGCGCACAGGATATAGTTATACCAGCGTTATTGTCGTTAGTGGTGAGTCGTCGGTATATCTGAATGGAGATACGACAATCAGCGGAGAATTCCCTCTGGGGTTTGCCGGGGTTATTCGGGTACAGGATAAAGCTTTGCTGGAAATTGGCAGTGGCGCTACGCTAACAATGCAGGATATTGACAGTTTTGAACATCATGGGACAAGAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGCTACTAACGGAGGGAGCGCCACTAATGCAGGTACGATCACAGGTAAAGTGACGGAACAACATAGCGTATTTAACAAGTATTCAACGGGCACATCGAATTCATTTATTTTTAATAACGATGTCAGTAGCATAACAGGGTTAGTCGCTCAATCGAATAGCACAATTATCAATACTGACAGCGGCATCATTGATTTGTATGGTCGTGGTAGTGTCGGCATGCTTGCTATAGCAGATTCAACAGCAGAAAATCAGGGTAAAATTACACTGGATTCTATGTGGGTAGATGCAAATGACACTACCGCAATGCGAGATATAGCTAGCAACAGCGCCATTGACTTCGGTACAGGTGTGGGAGTTGGTACTGATAGTTATAGTGGTGCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCGAAAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCAGGCGTTTTATAACGATGGCACAGGAACAATTGTTAACTATGGTACAATCTGCACTTTCGGCGTGTGCCAATCGGGGAATGAGTACAATAATACAGATGATTTCACCTCACTGATCTATACCGGTGGCGATACGATTACACGAAGCGGAGAAACTGTAACGCTAAATAAATCTGCTGCTGTGACTGATAAGCTGGCTGGGAATGTTGTTAATAGCGGAACGCTTTCCGGTGATCAAATTACGGTATCAAGCGGTCTTCTGGAAAATACCAGCGGTGGCATCATCAATAACTTAGTAAAACTTGACAAGGGTGCCGTCATTAAAAATGCCGGGGTGATGACGAATAACGTCGATGTTAGCGGTGGAATCCTCAATAATGCCGGAGAAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGTGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTCTTTAATAATCAAACTGACGGGGCGATTATGAGAGGTGCTGCGCTGACAGGTACTGCAGTGGCAAATAACGAAGGAACCTGGAACCTCGGAAGTAGTAGTGAGGGTAACAACACCGGGATGCTGGAAGTTAATAATAATTCAGCTTTCAATAACCGCGGCGAGTTTATTCTTGATAACGACAAGAATGCTGTGCACATCAACCAGTCCGGTACGCTTTATAATACCGGTCACATGAACATCAGTAATTCTTCCCACAACGGAGCCGTTAATATGTGGGGCGGAAATGGTCGTTTTATCAATGACGGAACGATTGATGTTTCTGCGAAGTCACTGGTAGTCAGCGCTAATAATGCCGGCGATCAGAATGCCTTCTTCTGGAACCAGGATAACGGGGTCATCAACTTCGATCACGACAGCGCCAGTGCCGTGAAAGTCACCCACAGCAACTTTATTGCCCAGAATGACGGCATCATGAACATCAGCGGCACCGGTGCTGTGGCTATGGAAGGTGATAAGAACGCGCAGCTGGTTAACAATGGCACCATCAACCTCGGTACCGCAGGCACTACTGACACGGGTATGATCGGTATGCAACTCGATGCCAACGCCACGGCGGATGCGGTAATCGAAAACAACGGCACCATCAATATCTTCGCCAATGACTCGTTTGCATTTAGCGTACTGGGTACAGTAGGTCATGTGGTTAACAACGGCACGGTGGTGATTGCCGATGGGGTTACGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTGGTATGGACTGCCAAAGGCAGCACCGATGCCAGCGGTAACGTTGACGTCACCATGAGCAAAAATGCCTACACCGATGTGGCAACAGATGCCTCGGTGAATGACATCGCGAAAGCACTGGATGCGGGTTACACCAACAACGAACTGTTTACCAGCCTGAACGTCGGCACGACTGCTGAACTGAACAGTGCTCTGAAACAGGTCAGCGGTAGCCAGGCGACCACGGTATTCCGCGAAGCGCGCGTGTTAAGCAACCGCTTTAGTATGCTGGCAGATGCCGCGCCGAAAGTGGGTAACGGTCTGGCGTTCAACGTTGTCGCGAAAGGCGATCCGCGTGCCGAGTTAGGTAATAATACCGAATACGACATGCTGGCATTGCGTAAAACTATCGACCTGAGCGAAAGCCAGACGATGAGTCTGGAGTACGGTATCGCTCGTCTCGATGGTGATGGTGCGCAGAAAGCGGGTGATAATGGCGTTACAGGCGGTTATAGCCAGTTTTTTGGCCTGAAACATCAGATGTCGTTCGATAACGGCATGAACTGGAATAACGCCTTGCGTTACGACGTTCACAACCTTGACAGCAGCCGCTCGATTGCATTTGGCAACACGAACAAAACGGCTGATACCGACGTGAAACAGCAGTACCTGGAGTTCCGCAGCGAAGGGGCGAAGACTTTCGAACCGAGCGAAGGACTGAAGGTTACGCCATATGCGGGTGTAAAACTGCGTCACACACTGGAAGGTGGCTATCAGGAGCGCAATGCCGGAGACTTTAACCTGAATATGAACAGTGGCAGCGAAACGGCGGTGGACAGCATCGTCGGGCTGAAACTGGACTACGCAGGTAAAGACGGCTGGAGCGCTAGCGCTACGCTGGAAGGCGGGCCGAACCTGAGCTACGCGAAGAGCCAGCGTACGGCAAGCCTGGCAGGCGCAGGCAGTCAGCACTTTAACGTCGATGACGGTCAGAAGGGCGGCGGCATCAATAGCCTGACAAGCGTCGGCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAA", 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"MQRKTLLSACIALALSGQGWAADITEVETTTGEKKNTNVTCPADPGKLSPEELKRLPSECSPLVEQNLMPWLSTGAAALITALAVVELNDDDDHHHRNNSPLPPTPPDDESDDTPVPPTPGGDEIIPDDPDDTPTPPKPVSFNNDVILDKTEKTLTIRDSVFTYTENADGTISLQDSNGRKATINLWQIDEANNTVALEGVSADGATKWQYNHNGELVITGDNATVNNNGKTTVDGKDSTGTEINGNNGKVIQDGDLDVSGGGHGIDITGDSATVDNKGTMTVTDPESMGIQIDGDKAIVNNEGESTITNGGTGTQINGDDATANNNGKTTVDGKDSTGTEINGNNGKVIQDGDLDVSGGGHGIDITGDSATVDNKGTMTVTDPESIGIQVDGDQAVVNNEGESAITNGGTGTQINGDDATANNNGKTTVDGKDSTGTEIAGNNGKVIQDGDLDVSGGGHGIDITGDSATVDNKGTMTVTDPESIGIQIDGDQAIVNNEGESTITNGGTGTQINGNDATANNSGKTTVDGKDSTGTKIAGNIGIVNLDGSLTVTGGAHGVENIGDNGTVNNKGDIVVSDTGSIGVLINGEGATVSNTGDVNVSNEATGFSITTNSGKVSLAGSMQVGDFSTGVDLNGNNNSVTLAAKDLKVVGQKATGINVSGDANTVNITGNVLVDKDKTADNAAEYFFDPSVGINVYGSDNNVTLDGKLTVVSDSEVTSRQSNLFDGSAEKTSGLVVIGDGNTVNMNGGLELIGEKNALADGSQVTSLRTGYSYTSVIVVSGESSVYLNGDTTISGEFPLGFAGVIRVQDKALLEIGSGATLTMQDIDSFEHHGTRTPELTYADSGAKIVNKGTVEIQNLGFAFVTGENTTGINSGTISLLQNGKDPAPSPIVLLATNGGSATNAGTITGKVTEQHSVFNKYSTGTSNSFIFNNDVSSITGLVAQSNSTIINTDSGIIDLYGRGSVGMLAIADSTAENQGKITLDSMWVDANDTTAMRDIASNSAIDFGTGVGVGTDSYSGAGKNATAINQLGGVITIYNAGAGMAAYGASNTVINQGTINLEKNGNYDDSLAANTLVGMAVYEHGTAINDQTGVININVGTGQAFYNDGTGTIVNYGTICTFGVCQSGNEYNNTDDFTSLIYTGGDTITRSGETVTLNKSAAVTDKLAGNVVNSGTLSGDQITVSSGLLENTSGGIINNLVKLDKGAVIKNAGVMTNNVDVSGGILNNAGEMTAQITMNAGADSSLVNNTGTINKIVQNAGVFNNSGSVTGRMMSAGGVFNNQTDGAIMRGAALTGTAVANNEGTWNLGSSSEGNNTGMLEVNNNSAFNNRGEFILDNDKNAVHINQSGTLYNTGHMNISNSSHNGAVNMWGGNGRFINDGTIDVSAKSLVVSANNAGDQNAFFWNQDNGVINFDHDSASAVKVTHSNFIAQNDGIMNISGTGAVAMEGDKNAQLVNNGTINLGTAGTTDTGMIGMQLDANATADAVIENNGTINIFANDSFAFSVLGTVGHVVNNGTVVIADGVTGSGLIKQGDSINVEGMNGNNGNSSEVHYGDYTLPDVPKPNTVSVTSGSDEAGGSMNNLNGYVVGTNVNGSAGKLKVNNASMNGVEINTGFTAGTADTTVSFDNVVEGSNLTDADAITSTSVVWTAKGSTDASGNVDVTMSKNAYTDVATDASVNDIAKALDAGYTNNELFTSLNVGTTAELNSALKQVSGSQATTVFREARVLSNRFSMLADAAPKVGNGLAFNVVAKGDPRAELGNNTEYDMLALRKTIDLSESQTMSLEYGIARLDGDGAQKAGDNGVTGGYSQFFGLKHQMSFDNGMNWNNALRYDVHNLDSSRSIAFGNTNKTADTDVKQQYLEFRSEGAKTFEPSEGLKVTPYAGVKLRHTLEGGYQERNAGDFNLNMNSGSETAVDSIVGLKLDYAGKDGWSASATLEGGPNLSYAKSQRTASLAGAGSQHFNVDDGQKGGGINSLTSVGVKYSSKESSLNLDAYNWKEDGISDKGVMLNFKKTF", 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], + [ + "gene_synonym", + "EcoGene:EG11309" + ], + [ + "gene_synonym", + "GI:16129367" + ], + [ + "gene_synonym", + "ECK1399" + ], + [ + "gene_synonym", + "b1406" + ], + [ + "gene_synonym", + "JW1403" + ] + ], + "dna_sequence": 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"ATGTTGAAGGCCAGGAATTGCGGCTGGATACGTTTACTGCCCCTGTTTATGCTGAGTCTACCAGTACAGGCGGAACTTCGATGTGTTGCAAATGCAGTTGATATTGAATCATTTTTTTCTGCGGCTACCGCTGAAGATAAACAACAAGTTGAACAAGCTATCAACAGTAGCGTGAATCTTGTCCCCTTCGGTTTATCTGCATCGAACTGGAAAGTGCATCGTGGCGATTTAGTGGTAGAAGGTAATATAGAGAGTAATCAAAAATTGATTGTTCTTGGGAATTTGACAGTCAAAGGTAATATTTCCACTTTCTCTCTTTCTAATCCATGGGTTATTCTCGGTAACGTGACGGCAACGAATATAGTTGCGGATTCACCACTGTTAATTACCGGTTCGATAAATGCAAGTGGACTGGTATTTATCGACTCATATTACGATAATCCGTCTACGATTAAGGGGAGTATTAATGCGCGTGGGATATTTATCAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATTCGCATGGCAGGGAATGTCTGTAATCAGATGAAAAAAGAAGCGCTGTTTCGCCCTAAGCCTTCTCCTGAGTTAGTGCAAGAATTGCAAATGCTGGATGAAGGCAAAGTTGCTGCATTTGAAGGACGAGACATTGCGACATTTGATCTTGCCGTAATGCGAACTCTCCCAAGGCTTAAAGGAATTTCAGCTAACCTACGCAAACAACTTATTAATAGCAATGATGAACAAACGATTGAAAGTATGGCGAGATATATGCCTGACAATGAGATTCTGGAGTTGACCGATCAGCAATTGGGTTACCAGCCTGTTGTTCTGGGGTTGCTCGACCGTGAACCGCTCTCTGTCGAAATAATGACGCGAATGAGTCGTCTACCTGATGGTGTCGGTCCGTTGAATCTTGCGCTACGTGAAAATCTCCCTCTGGATATCGTCATGACTCTGGCGAAAAGAGATTGGGATATGATCATTCAGGAGCTTTATAAAGATGCGTGGTTATTGCCTGAATCCATTATTGATGGCTATATCCGCAGTGATGATTCCTCTATTCGTCAGGTCGGTGCTGGAGGACAACTCACCTACAATCAGGCAATGCAGTTGGCGAACGATTCATCAAACAATGTTGTCACAAGCTTAGCGTTCAAGCTGGCAGAGATGAAACACCATGGTCAATTGTTGCGGATGACGCCACAAGAGAGTGACAAAGTTGCAGGCTATTTATACCAAAAATTCGAGAATGACGATGATCTAATACGTGTGTTATTTTTAGCATTGCCAGATAACTTACAGTTTAATTTTGTTAAAAGGATGGAGAAAAAATCCCCGGCCTACTTTTGCTGTCGGGATATGCAGGTAATTCACTCTGACGCTGCTTTACAACGGTTATTGACACGTTTCAACGATCCTGAAGGGTGGAGTAATCTGGCGAAAAATCAGTATCTGAGCACGTCGATGAAACAAAAAATTTGGCAACGTGCTTTATCGCATCGGAAAAATAATCCGAAAGCAGATTCAGATGCATATGAAACCAGCGCTGATATGATTTTGTCTGAGCTGATTAGCCACGGCGAAGTTGATGACCAGATGCTATTAAATGCCACCGCCCTGATACGTTCGGACGACTGGGACTTTTTAGAGAGTGCATTAATTAGTTGGGATAATTTACCCGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGCGTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAAACAACCGGATCGTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTTCGGCGCACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGA", 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"id": "CDS_1396", + "location": [ + [ + "NC_000913", + 1477621, + "+", + 606 + ] + ], + "md5": "fb4a898c463c0e330b8b6f93842b23f6", + "parent_gene": "", + "protein_md5": "8776f6f0734e8e4da3d5838d71d3e3b6", + "protein_translation": "MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLLMLAAQPILFLLLPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVILMLFCTILTEFCGLLAQTINGVRSYAGPFGKSDRALIFGLWGLAVAIYPQWMQWNNLLWSIASILLLWTAINRCRSVLLMSAEI", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ynbB" + ], + [ + "gene_synonym", + "ECK1402" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76091" + ], + [ + "gene_synonym", + "NP_415927.1" + ], + [ + "gene_synonym", + "EcoGene:EG13749" + ], + [ + "gene_synonym", + "ASAP:ABE-0004706" + ], + [ + "gene_synonym", + "GI:16129370" + ], + [ + "gene_synonym", + "b1409" + ], + [ + "gene_synonym", + "JW1406" + ], + [ + "gene_synonym", + "GeneID:945972" + ] + ], + "dna_sequence": "ATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGGTTACCGGAGAGAAAAGGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTGTTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTATTCCTCTTAACTATTTGCTTATCGGTTTTAATTGCTTTGAGCTGTTTCTGTTATTTATACCTTTGGCTGGGTTTCTGATATTAGCCACCGGGCAAGTTTTAGTGGGTGACCCCTCTGGTTTTCTGCATACCGTGAGCGCCATTTTTTGGGGCTGGATAATGACCGTTTTCGCCTTGAGTCATGCCGCCTGGTTATTAATGTTGCCAACCACAAATATCCAGGGCGGGGCGTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGTCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGTTACTGACACCGCTAAATACATTACAGGCATTATTAGCGGGTTTGTTAATTGGTATTAGTGGTTTTTGCGGCGATGTCGTGATGTCAGCCATCAAACGAGATATTGGTGTTAAAGATAGCGGAAAACTATTGCCAGGACATGGCGGACTCCTTGACAGGATTGACTCATTAATTTTCACCGCTCCGGTATTTTTTTATTTTATACGCTACTGCTGTTACTGA", + "dna_sequence_length": 897, + "functions": [ + "putative CDP-diglyceride synthase" + ], + "id": "CDS_1397", + "location": [ + [ + "NC_000913", + 1478226, + "+", + 897 + ] + ], + "md5": "ae5a4ecbce9787af9cc170e5593de926", + "parent_gene": "", + "protein_md5": "86f1435d79803d10963912079c47d749", + "protein_translation": "MLEKSLATLFALLILATLINRFLLWRLPERKGGEVTLRIRTWWGIVICFSMVISGPRWMTLTFFALISFLALKEYCTLISVHFPRWLYWGIPLNYLLIGFNCFELFLLFIPLAGFLILATGQVLVGDPSGFLHTVSAIFWGWIMTVFALSHAAWLLMLPTTNIQGGALLVLFLLALTESNDIAQYLWGKSCGRRKVVPKVSPGKTLEGLMGGVITIMIASLIIGPLLTPLNTLQALLAGLLIGISGFCGDVVMSAIKRDIGVKDSGKLLPGHGGLLDRIDSLIFTAPVFFYFIRYCCY", + "protein_translation_length": 298, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ynbC" + ], + [ + "gene_synonym", + "ECK1403" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76092" + ], + [ + "gene_synonym", + "EcoGene:EG13750" + ], + [ + "gene_synonym", + "GeneID:945970" + ], + [ + "gene_synonym", + "NP_415928.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0004708" + ], + [ + "gene_synonym", + "GI:16129371" + ], + [ + "gene_synonym", + "b1410" + ], 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"ATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGTTTTATCGGCACTGGCCCGCTTTACAGCCCGGGGCGAAAAAGGTCATCGTCTTATTTCATCGCGGGCATGAACATTCTGGTCGTCTACAACATCTCGTTGATGAACTGGCGATGCCAGATACTGCTTTTTATGCCTGGGATGCCCGAGGGCATGGAAAAAGTTCGGGGCCGCGTGGTTATAGCCCATCTCTTGCGCGTTCAGTGCGGGATGTCGATGAATTTGTCCGTTTTGCTGCCAGCGACAGCCAGGTTGGACTGGAAGAGGTGGTAGTGATCGCGCAAAGCGTCGGCGCAGTGCTGGTTGCCACATGGATTCATGATTATGCACCTGCAATTCGCGGGCTGGTGCTGGCTTCTCCGGCCTTTAAGGTTAAATTGTATGTGCCGCTGGCACGTCCTGCGCTGGCGTTATGGCATCGTCTGCGTGGTCTGTTTTTTATTAATTCCTATGTGAAAGGACGCTATTTGACCCACGATCGGCAACGGGGGGCGAGTTTCAATAATGATCCGCTGATCACACGGGCGATTGCCGTTAATATCTTGCTCGATCTCTACAAAACGTCTGAACGTATTATTAGAGATGCGGCGGCGATTACGCTCCCCACGCAACTTCTGATATCAGGCGATGACTATGTGGTGCATCGCCAACCGCAGATTGATTTTTATCAGAGATTACGTAGCCCTCTGAAAGAGCTGCATCTGCTGCCAGGCTTTTATCACGACACGTTGGGTGAAGAGAACAGGGCGCTGGCATTTGAAAAAATGCAAAGCTTTATTAGTCGTTTATATGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGACCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGCCTGCATCTCGGAATGAGCACCGGCTTTGATTCAGGCAGTTCGCTGGATTATGTCTATCAAAATCAACCGCAAGGTAGTAACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGATCTCCACGCCAAAGGTTTAGCCGTCCGCGTGGTTGACATTGCCGCAGGGCATGGGCGCTATGTACTGGATGCGCTGGCAAACGAGCCTGCCGTAAGCGATATTTTGTTACGTGATTACAGCGAGTTAAATGTTGCACAGGGGCAAGAGATGATTGCTCAACGGGGAATGTCTGGGCGGGTGCGTTTTGAACAGGGCGATGCGTTTAACCCGGAGGAACTCAGCGCGTTAACTCCGCGGCCTACGCTGGCGATTGTCTCTGGCCTGTATGAGCTTTTTCCCGAAAATGAGCAGGTAAAAAACTCACTCGCAGGTCTTGCCAATGCCATCGAACCGGGCGGCATTCTCATCTACACCGGGCAGCCGTGGCACCCTCAACTGGAGATGATTGCCGGGGTGTTAACCAGTCATAAAGATGGTAAACCGTGGGTAATGCGCGTGCGTTCGCAAGGGGAGATGGATTCACTCGTGCGTGATGCCGGATTTGATAAATGCACACAACGGATTGATGAGTGGGGTATTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGA", 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"ECK1404" + ], + [ + "gene_synonym", + "ASAP:ABE-0004710" + ], + [ + "gene_synonym", + "ynbD" + ], + [ + "gene_synonym", + "NP_415929.1" + ], + [ + "gene_synonym", + "GeneID:945985" + ], + [ + "gene_synonym", + "GI:16129372" + ], + [ + "gene_synonym", + "EcoGene:EG13751" + ], + [ + "gene_synonym", + "b1411" + ], + [ + "gene_synonym", + "JW1408" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76093" + ] + ], + "dna_sequence": "TTGCTACAAGGCGCTGGCTGGTTATTGTTGCTGGCCCCGTTTTTCTTCTTCACCTATGGATCTCTTAATCAGTTCACCGCGGTTCAGGACCTTAACAGCCATGATATCCCCAGTCAGGTATTCGGTTGGGAAACGGCGATCCCTTTTCTTCCCTGGACTATTGTTCCTTACTGGAGTCTGGATCTTTTATATGGATTTTCGCTGTTCGTTTGTAGCACGACATTCGAACAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGTCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTATTCTCTGCTGGCTACTTTGGCGTCACTTTCGTCAGCATCTGGCTGAGAGGTGGCGTAAAGTCTGCGGCGGATGGTTTTTACTCATCGCCATTTCGACGCTGACGACCTGGCAGCATCATTTTATTGATGTCATCACAGGGCTGGCGGTAGGTATGTTGATTGACTGGATGGTGCCCGTCGACCGTCGTTGGAATTATCAGAAACCTGATCAACGTCGAATCAAAATAGCACTGCCCTATGTCGTAGGCGCGGGCTCGTGCATTGTATTGATGGAGCTAATGATGATGATTCAGTTATGGTGGTCAGTCTGGTTATGTTGGCCAGTATTATCGCTACTCATAATTGGCCGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAACTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTTCCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGACACTGTAAAACCGTTAATGAAGCGATTAGCTATATTCGAGCCAGACGCCCGCAGATTGTGCTGACAGACGAGCACAAAGCGATGCTGAGATTATGGGAAAACAGGTAA", 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"EcoGene:EG12695" + ], + [ + "gene_synonym", + "GeneID:947569" + ], + [ + "gene_synonym", + "acpD" + ], + [ + "gene_synonym", + "b1412" + ], + [ + "gene_synonym", + "GI:16129373" + ], + [ + "gene_synonym", + "JW1409" + ], + [ + "gene_synonym", + "azoR" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P41407" + ] + ], + "dna_sequence": "ATGAGCAAGGTATTAGTTCTTAAATCCAGCATCCTGGCAGGGTACTCTCAGTCTAATCAGTTGTCCGATTATTTTGTTGAACAATGGCGCGAAAAGCACTCCGCTGATGAAATCACCGTTCGCGACCTGGCTGCAAATCCGATTCCGGTACTGGATGGCGAACTGGTTGGCGCTCTGCGTCCGAGCGATGCGCCGCTGACTCCGCGTCAGCAGGAAGCTCTGGCACTTTCCGATGAGTTGATTGCCGAGCTGAAAGCCCACGACGTTATCGTTATTGCGGCACCGATGTATAACTTCAACATCTCGACTCAGTTGAAAAACTATTTTGACCTGGTTGCCCGCGCAGGCGTTACTTTCCGCTATACCGAGAACGGTCCGGAAGGTCTGGTAACGGGTAAAAAAGCCATCGTTATTACCAGCCGCGGCGGGATCCACAAAGATGGACCAACGGACCTGGTGACGCCGTATCTGTCCACGTTCCTCGGCTTTATCGGCATTACCGATGTGAAATTTGTCTTCGCCGAAGGGATCGCATACGGTCCGGAAATGGCAGCGAAAGCACAGTCTGACGCAAAAGCAGCCATCGACAGCATTGTTTCTGCATAA", + "dna_sequence_length": 606, + "functions": [ + "NADH-azoreductase, FMN-dependent" + ], + "id": "CDS_1400", + "location": [ + [ + "NC_000913", + 1482860, + "-", + 606 + ] + ], + "md5": "eda35f43bccabdff2ce8610735ee7dae", + "parent_gene": "", + "protein_md5": "f5c6f93beed5caed2e31c09f11f7a653", + "protein_translation": "MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSA", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:948444" + ], + [ + "gene_synonym", + "ECK1406" + ], + [ + "gene_synonym", + "NP_415931.4" + ], + [ + "gene_synonym", + "JW5905" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43329" + ], + [ + "gene_synonym", + "ASAP:ABE-0004718" + ], + [ + "gene_synonym", + "hrpA" + ], + [ + "gene_synonym", + "b1413" + ], + [ + "gene_synonym", + "EcoGene:EG12936" + ], + [ + "gene_synonym", + "GI:145698255" + ] + ], + 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"MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG", + "protein_translation_length": 1300, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK1407" + ], + [ + "gene_synonym", + "GeneID:946215" + ], + [ + "gene_synonym", + "ydcF" + ], + [ + "gene_synonym", + "ASAP:ABE-0004722" + ], + [ + "gene_synonym", + "NP_415932.1" + ], + [ + "gene_synonym", + "GI:16129375" + ], + [ + "gene_synonym", + "b1414" + ], + [ + "gene_synonym", + "EcoGene:EG12110" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P34209" + ], + [ + "gene_synonym", + "JW1411" + ] + ], + "dna_sequence": 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"ASAP:ABE-0285094" + ], + [ + "gene_synonym", + "gapC" + ], + [ + "gene_synonym", + "ASAP:ABE-0004729" + ], + [ + "gene_synonym", + "EcoGene:EG12103" + ], + [ + "gene_synonym", + "ASAP:ABE-0004727" + ], + [ + "gene_synonym", + "JW5906" + ], + [ + "gene_synonym", + "ECK1409" + ], + [ + "gene_synonym", + "JW1413" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33898" + ] + ], + "dna_sequence": "ATGAGTAAAGTTGGTATTAACGGTTTTGGTCGTATCGGTCGACTGGTGTTGGGTCGATTACTTGAAGTCAAAAGCAACATAGACGTTGTCGCTATTAATGATCTCACTTCCCCATAAATTCTCGCCTACCTGCTGAAACATGATTCAAACTACGGACCATTCCCCTGGAGCGTTGATTTTACGGAAGATTCACTTATCGTTGATGGGAAAAGTATCGCGGTTTACGCCGAAAAAGAGGCTAAAAATATTCCGTGGAAAGCGAAAGGTGCAGAAATCATTGTCGAATGTACTGGCTTTTATACCTCCGCCGAGAAATCGCAGGCGCATCTTGATGCTGGTGCGAAGAAGGTGTTGATTTCCGCCCCTGCCGGTGAAATGAAAACTATCGTTTATAACGTCAATGACGACACTCTGGATGGCAACGACACCATTGTTTCCGTGGCGTCATGCACCACTAACTGTCTTGCGCCGATGGCCAAAGCCTTGCATGACAGTTTCGGGATAGAAGTCGGCACGATGACGACCATTCATGCCTATACTGGCACCCAGTCACTGGTGGATGGCCCGCGTGGTAAAGATTTACGTGCTTCACGCGCAGCGGCAGAAAATATCATTCCCCACACTACGGGGGCGGCAAAAGCCATTGGTCTGGTGATCCCGGAACTGAGCGGCAAACTGAAAGGTCATGCGCAACGCGTGCCGGTGAAAACAGGTTCGGTCACTGAACTGGTATCGATTCTCGGAAAAAAGGTGACTGCCGAAGAGGTGAATAACGCACTTAAACAAGCAACCACCAATAACGAGTCATTTGGTTATACCGATGAAGAAATAGTCTCTTCCGATATCATTGGCAGCCATTTCGGTTCGGTGTTTGATGCCACGCAAACGGAAATTACCGCCGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACACAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGA", 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"dna_sequence_length": 981, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1415", + "location": [ + [ + "NC_000913", + 1500449, + "-", + 981 + ] + ], + "md5": "d6a2d0eb411c2499e5969e59dfdb7b29", + "parent_gene": "", + "protein_md5": "e2acdcc9d367a2e54897181b035e4d85", + "protein_translation": "MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCWIYDQNAIAFGGAVISGNTRITGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLVYGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARVSASRIVHQAQIYGDAVVRYAFIEHRAEVFDFASIEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIVEGNCVLKHHVLVGGNAVVRGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRTPLAGLL", + "protein_translation_length": 326, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_415946.1" + ], + [ + "gene_synonym", + "ECK1422" + ], + [ + "gene_synonym", + "GeneID:945852" + ], + [ + "gene_synonym", + "tehA" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25396" + ], + [ + "gene_synonym", + "EcoGene:EG11883" + ], + [ + "gene_synonym", + "GI:16129388" + ], + [ + "gene_synonym", + "JW1425" + ], + [ + "gene_synonym", + "ASAP:ABE-0004770" + ], + [ + "gene_synonym", + "b1429" + ] + ], + "dna_sequence": 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"ATGCGTACCACATCATTTGCGAAAGTTGCAGCTTTATGCGGCTTATTGGCTCTGTCTGGTTGTGCATCTAAAATCACCCAGCCAGATAAATATTCTGGTTTTTTAAACAATTACTCTGATTTAAAAGAAACAACCTCGGCTACAGGTAAACCTGTTTTACGTTGGGTAGACCCGAGTTTTGATCAAAGCAAATATGACAGCATCGTCTGGAACCCAATCACTTATTATCCGGTACCGAAACCGTCGACCCAGGTAGGGCAGAAAGTTCTGGATAAAATTTTGAACTATACCAACACCGAAATGAAAGAAGCGATAGCGCAGCGTAAACCACTGGTTACCACCGCTGGGCCGCGTAGTCTGATTTTCCGTGGGGCCATTACCGGTGTAGATACCAGCAAAGAAGGGCTGCAATTCTATGAAGTGGTTCCTGTTGCATTAGTGGTTGCGGGGACGCAAATGGCTACAGGCCACCGTACCATGGATACTCGCCTCTATTTTGAAGGTGAGCTGATTGATGCAGCGACTAATAAACCGGTTATCAAAGTCGTTCGTCAGGGCGAAGGTAAAGACCTGAATAACGAAAGTACGCCAATGGCTTTCGAAAATATTAAACAAGTTATTGATGACATGGCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAG", + "dna_sequence_length": 669, + "functions": [ + "lipoprotein" + ], + "id": "CDS_1418", + "location": [ + [ + "NC_000913", + 1502457, + "+", + 669 + ] + ], + "md5": "13e8fa0fc4398654ddd763f437f14bcb", + "parent_gene": "", + "protein_md5": "b0e55e17c63be92cf77373e9cd1ef18e", + "protein_translation": "MRTTSFAKVAALCGLLALSGCASKITQPDKYSGFLNNYSDLKETTSATGKPVLRWVDPSFDQSKYDSIVWNPITYYPVPKPSTQVGQKVLDKILNYTNTEMKEAIAQRKPLVTTAGPRSLIFRGAITGVDTSKEGLQFYEVVPVALVVAGTQMATGHRTMDTRLYFEGELIDAATNKPVIKVVRQGEGKDLNNESTPMAFENIKQVIDDMATDATMFDVNKK", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG14359" + ], + [ + "gene_synonym", + "ASAP:ABE-0285051" + ], + [ + "gene_synonym", + "orf1" + ], + [ + "gene_synonym", + "b4578" + ], + [ + "gene_synonym", + "ASAP:ABE-0285052" + ], + [ + "gene_synonym", + "yncK" + ], + [ + "gene_synonym", + "GeneID:4056028" + ], + [ + "gene_synonym", + "insP" + ], + [ + "gene_synonym", + "orfA" + ], + [ + "gene_synonym", + "tnpA" + ], + [ + "gene_synonym", + "ECK1425" + ], + [ + "gene_synonym", + "JW5961" + ], + [ + "gene_synonym", + "ASAP:ABE-0285110" + ], + [ + "gene_synonym", + "JW5227" + ] + ], + "dna_sequence": "ATGATACTTTGGTCTGTGAAAAAAGAAACCGATATCCGGCGTGGAAGGCATTGTGTTTTCCTGATGCATGTTCACCTGCTCTTTGTCACCAGATACCGACGCCAGATTTTTGACCATGACGCGACAGAAAAACTACGCACTTACTTTTCAAATGTATGTGCTGATTTTGAAGCTGAACTGGTTGAAATGGATGGCGAACCAGATCACGTCCATTTGTTAATTAACTATCCTCCCAAACTGGCGATATCCAGTCTGGTAAACAGCCTCAAAGGCGTATCGGGTAGGTGACTGCGACGAGATCGACCAGATATTGCATTCAGGTATTACTACAAAGGCGTTTTGTGGAGTCCTGGCTATTTTGCCAGTAGCTGCGGAGGTGCGCCAATATCCGTCATCCGCCAATACATTGAACAACAGCAAACACCTGGTCAG", + "dna_sequence_length": 432, + "id": "CDS_1419", + "location": [ + [ + "NC_000913", + 1503649, + "-", + 432 + ] + ], + "md5": "3c63df6473020db18bc7ae17915972af", + "parent_gene": "", + "protein_md5": "68bcd2f0d8cfb5780beb48c9bc1e77e3", + "protein_translation": "MILWSVKKETDIRRGRHCVFLMHVHLLFVTRYRRQIFDHDATEKLRTYFSNVCADFEAELVEMDGEPDHVHLLINYPPKLAISSLVNSLKGVSGR", + "protein_translation_length": 95, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_415949.2" + ], + [ + "gene_synonym", + "ydcM" + ], + [ + "gene_synonym", + "GI:288551665" + ], + [ + "gene_synonym", + "ECK1426" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76102" + ], + [ + "gene_synonym", + "orf2" + ], + [ + "gene_synonym", + "JW5228" + ], + [ + "gene_synonym", + "insQ" + ], + [ + "gene_synonym", + "GeneID:944942" + ], + [ + "gene_synonym", + "tnpB" + ], + [ + "gene_synonym", + "ASAP:ABE-0004778" + ], + [ + "gene_synonym", + "orfB" + ], + [ + "gene_synonym", + "b1432" + ], + [ + "gene_synonym", + "EcoGene:EG13756" + ] + ], + "dna_sequence": "ATGAGGCGCTTCGCAGGCGCATGTCGTTTCGTTTTCAATCGTGCTCTGGCACGTCAGAATGAGAATCATGAGGCCGGTAATAAATACATCCCTTACGGGAAAATGGCTTCCTGGCTGGTTGAGTGGAAAAATGCCACTGAAACGCAATGGCTTAAAGATTCTCCCTCACAGCCATTGCAACAGTCACTGAAAGACCTTGAGCGGGCTTACAAAAACTTCTTCCGGAAGCGGGCTGCTTTTCCCCGATTCAAAAAGCGGGGACAGAATGATGCATTCCGCTACCCGCAGGGCGTTAAGCTCGATCAGGAAAACAGCCGTATTTTTCTGCCGAAACTGGGCTGGATGCGCTACCGGAACAGCCGTCAGGTCACGGGTGTTGTGAAAAATGTCACTGTCAGCCAGTCCTGCGGTAAGTGGTACATCAGTATTCAGACAGAAAGTGAAGTATCAACTCCGGTTCACCCTTCAGCATCAATGGTCGGGCTGGATGCTGGCGTGGCTAAACTCGCCACGCTGTCAGATGGCACAGTCTTTGAGCCTGTAAACAGTTTTCAGAAAAACCAGAAGAAGCTGGCGAGACTTCAGCGACAGTTAAGCCGCAAGGTCAAATTCAGCAACAACTGGCAAAAGCAGAAACGCAAAATACAGCGACTGCATTCCTGTATCGCAAATATCCGCAGGGACTACCTTCACAAAGTCACAACGGCCGTCAGCAAAAACCACGCAATGATAGTCATTGAGGATTTGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGGTCAGCCAGCCGGGGCGCAATGTCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGA", 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"gene_synonym", + "ydcE" + ], + [ + "gene_synonym", + "ECK1455" + ], + [ + "gene_synonym", + "ASAP:ABE-0004875" + ], + [ + "gene_synonym", + "JW1456" + ], + [ + "gene_synonym", + "GI:16129420" + ], + [ + "gene_synonym", + "pptA" + ], + [ + "gene_synonym", + "b1461" + ] + ], + "dna_sequence": "ATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGTTCGATAAGCATTGCTCTACAGCAGATTCAACCAGAATCTTGGCAAGCTATCTGGGATGCCGAAATCGCGCCCCAAATGGAGGCTTTGATAAAGAAACCTGGTTATAGCATGAATGCTTAA", + "dna_sequence_length": 234, + "functions": [ + "4-oxalocrotonate tautomerase" + ], + "id": "CDS_1449", + "location": [ + [ + "NC_000913", + 1533052, + "+", + 234 + ] + ], + "md5": "93f8857830eabe5b174e86e37ae399fc", + "parent_gene": "", + "protein_md5": "f29a216ec3899ba1a9b4ab3e6e62ced1", + "protein_translation": "MPHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA", + "protein_translation_length": 77, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76121" + ], + [ + "gene_synonym", + "ECK1456" + ], + [ + "gene_synonym", + "JW1457" + ], + [ + "gene_synonym", + "ASAP:ABE-0004877" + ], + [ + "gene_synonym", + "GeneID:946192" + ], + [ + "gene_synonym", + "yddH" + ], + [ + "gene_synonym", + "b1462" + ], + [ + "gene_synonym", + "NP_415979.2" + ], + [ + "gene_synonym", + "GI:90111278" + ], + [ + "gene_synonym", + "EcoGene:EG13779" + ] + ], + "dna_sequence": 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"MSRFIPIELHHASRLLNHGPTVLITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKSTWTRELIEHNGKFGIVIPGVAATNWTWAVGSVSGRDEDKFNCYGIPVVRGPVFGLPLVEEKCLAWMECRLLPATSAQEEYDTLFGEVVSAAADARVFVEGRWQFDDDKLNTLHHLGAGTFVTSGKRVTAG", + "protein_translation_length": 189, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16129422" + ], + [ + "gene_synonym", + "GeneID:947251" + ], + [ + "gene_synonym", + "ECK1457" + ], + [ + "gene_synonym", + "EcoGene:EG13780" + ], + [ + "gene_synonym", + "yddI" + ], + [ + "gene_synonym", + "b1463" + ], + [ + "gene_synonym", + "NP_415980.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77567" + ], + [ + "gene_synonym", + "ASAP:ABE-0004882" + ], + [ + "gene_synonym", + "nhoA" + ], + [ + "gene_synonym", + "JW1458" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P77519" + ], + [ + "gene_synonym", + "ECK1466" + ], + [ + "gene_synonym", + "yddL" + ], + [ + "gene_synonym", + "EcoGene:EG13783" + ], + [ + "gene_synonym", + "b1472" + ] + ], + "dna_sequence": "ATGAAATTAAAAATAGTTGCGGTGGTTGTAACTGGTTTGTTAGCTGCGAACGTAGCACACGCTGCCGAAGTCTATAACAAGGATGGTAATAAACTCGACCTTTATGGCAAGGTTACCGCTCTACGTTATTTTACTGATGATAAGCGTGACGATGGTGATAAAACTTATGCCCGTCTCGGCTTTAAAGGAGAAACGCAAATCAATGATCAAATGATTGGTTTTGGTCACTGGGAATATGATTTTAAAGGCTATAACGATGAAGCCAACGGCTCGCGCGGC", + "dna_sequence_length": 279, + "id": "CDS_1459", + "location": [ + [ + "NC_000913", + 1546028, + "-", + 279 + ] + ], + "md5": "7325bf1fa1417c959cbaeb19f3356b14", + "parent_gene": "", + "protein_md5": "773e21d6b380b85e4008ca680e2939a2", + "protein_translation": "MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRG", + "protein_translation_length": 93, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004912" + ], + [ + "gene_synonym", + "JW1469" + ], + [ + "gene_synonym", + "GeneID:945942" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46136" + ], + [ + "gene_synonym", + "GI:145698260" + ], + [ + "gene_synonym", + "ECK1467" + ], + [ + "gene_synonym", + "NP_415990.5" + ], + [ + "gene_synonym", + "yddG" + ], + [ + "gene_synonym", + "EcoGene:EG12713" + ], + [ + "gene_synonym", + "b1473" + ] + ], + "dna_sequence": 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"gene_synonym", + "b1474" + ] + ], + "dna_sequence": 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"ae925f781542f62e0289ab620afba05e", + "parent_gene": "", + "protein_md5": "0ef5fe073a18ffe29165fe9bf865a23a", + "protein_translation": "MSKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI", + "protein_translation_length": 217, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:145698261" + ], + [ + "gene_synonym", + "JW5908" + ], + [ + "gene_synonym", + "ASAP:ABE-0004925" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67699" + ], + [ + "gene_synonym", + "NP_415994.4" + ], + [ + "gene_synonym", + "yddM" + ], + [ + "gene_synonym", + "ECK1471" + ], + [ + "gene_synonym", + "EcoGene:EG13784" + ], + [ + "gene_synonym", + "GeneID:946040" + ], + [ + "gene_synonym", + "b1477" + ] + ], + "dna_sequence": 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"GTGACCTTCTGGAGTATTTTACGCCAACGCTGCTGGGGGCTGGTGCTCGTGGTGGCGGGCGTCTGCGTGATTACGTTTATTATCTCGCATCTGATCCCTGGTGATCCGGCGCGGTTACTGGCGGGTGACCGCGCCAGCGATGCTATCGTGGAAAATATTCGCCAGCAACTGGGACTGGACCAGCCACTGTATGTACAGTTTTACCGCTACGTCAGCGACCTGTTTCATGGTGACCTGGGAACATCCATTCGTACCGGGCGTCCGGTGCTGGAAGAGTTGCGTATATTTTTCCCGGCGACGCTGGAGCTGGCTTTTGGTGCCCTGCTGCTGGCACTCCTGATTGGCATCCCGCTGGGCATACTCTCTGCAGTCTGGCGAAATCGCTGGCTGGATCATCTGGTGCGAATAATGGCCATTACCGGAATCTCCACACCTGCGTTCTGGCTTGGGCTGGGCGTCATTGTGCTGTTTTATGGTCATCTGCAAATTCTTCCCGGCGGCGGAAGGCTTGATGACTGGCTGGATCCACCAACGCACGTTACCGGCTTTTATCTGCTCGATGCGCTGCTTGAAGGCAACGGTGAAGTCTTCTTCAATGCGTTGCAACATCTCATCTTACCGGCATTAACGCTGGCGTTCGTTCACCTGGGAATTGTCGCTCGCCAGATCCGCTCAGCGATGCTGGAACAATTGAGTGAAGACTACATTCGTACCGCCCGGGCCAGCGGCTTGCCCGGCTGGTATATCGTTTTATGTTATGCGCTACCCAATGCGTTGATCCCATCGATTACCGTATTGGGTTTGGCGCTGGGCGATTTGTTGTATGGCGCAGTGCTCACCGAAACCGTTTTTGCCTGGCCCGGAATGGGTGCATGGGTAGTAACATCAATACAGGCGCTCGACTTCCCGGCAGTGATGGGCTTTGCCGTCGTGGTTTCATTTGCTTATGTGCTGGTCAACCTGGTGGTGGATTTGCTCTATTTGTGGATTGATCCGCGTATCGGACGTGGAGGTGGTGAATGA", 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"gene_synonym", + "ASAP:ABE-0004958" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76128" + ], + [ + "gene_synonym", + "ddpA" + ], + [ + "gene_synonym", + "ECK1481" + ], + [ + "gene_synonym", + "GeneID:946052" + ] + ], + "dna_sequence": "ATGAAGAGATCGATATCGTTTCGTCCCACATTGCTCGCGCTCGTCCTTGCCACAAATTTCCCGGTTGCGCACGCCGCCGTACCAAAAGATATGCTGGTGATTGGTAAGGCCGCCGATCCACAAACCCTCGACCCGGCGGTAACAATAGATAATAACGACTGGACAGTGACCTACCCGTCTTATCAGCGGCTGGTTCAGTACAAAACGGACGGTGATAAAGGCTCAACCGACGTTGAAGGCGATCTGGCAAGTAGCTGGAAAGCGTCTGACGATCAAAAAGAGTGGACGTTCACCCTGAAAGATAATGCTAAATTTGCCGATGGCACACCTGTCACTGCCGAAGCAGTAAAACTTTCTTTTGAGCGGCTACTAAAAATCGGCCAGGGGCCAGCAGAAGCATTTCCCAAAGATTTAAAGATTGATGCTCCCGACGAACATACGGTGAAGTTTACCCTTAGCCAACCATTCGCACCGTTCCTCTACACGCTGGCGAATGACGGTGCATCCATTATCAATCCGGCGGTCTTAAAGGAACATGCAGCGGATGATGCTCGCGGCTTCCTCGCGCAAAATACCGCCGGTTCCGGACCATTTATGCTGAAAAGCTGGCAAAAAGGTCAGCAATTAGTTCTGGTGCCAAATCCGCATTACCCAGGCAATAAACCGAACTTCAAACGGGTATCGGTAAAAATTATTGGTGAAAGTGCCTCCCGTCGCCTGCAGCTCTCCCGTGGCGACATTGACATTGCCGATGCGCTGCCGGTGGATCAACTCAACGCCCTGAAGCAGGAAAATAAAGTCAATGTGGCAGAGTATCCGTCACTGCGCGTTACCTATCTGTATCTGAATAACAGCAAAGCGCCTCTTAATCAGGCGGATCTGCGTCGGGCCATTTCCTGGTCTACCGATTATCAGGGCATGGTTAACGGCATTCTGAGTGGTAACGGAAAACAGATGCGCGGCCCGATTCCGGAAGGCATGTGGGGCTACGATGCGACGGCAATGCAATACAACCATGACGAAACGAAAGCCAAAGCCGAATGGGATAAAGTGACGAGCAAACCCACCAGCCTGACGTTTCTCTACTCCGATAACGATCCGAACTGGGAGCCTATTGCTCTGGCGACACAATCCAGTCTCAACAAGCTGGGCATCATTGTGAAGCTGGAAAAGCTGGCGAACGCCACCATGCGCGACAGAGTGGGTAAAGGTGATTACGACATTGCGATTGGCAACTGGAGTCCGGATTTTGCCGACCCGTATATGTTTATGAATTACTGGTTTGAGTCAGACAAAAAAGGTCTGCCGGGTAACCGCTCGTTCTATGAAAACAGTGAGGTCGATAAGTTACTGCGCAATGCGCTTGCGACCACCGACCAGACGCAGCGTACCCGGGACTACCAGCAGGCACAGAAAATCGTCATTGATGACGCTGCTTATGTGTACCTGTTCCAGAAAAACTACCAACTGGCGATGAACAAAGAGGTGAAAGGCTTTGTGTTCAATCCCATGCTGGAACAGGTCTTCAATATCAATACCATGAGTAAATAA", 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"gene_synonym", + "GeneID:945532" + ], + [ + "gene_synonym", + "JW1483" + ], + [ + "gene_synonym", + "vanX" + ], + [ + "gene_synonym", + "yddT" + ], + [ + "gene_synonym", + "ASAP:ABE-0004960" + ], + [ + "gene_synonym", + "EcoGene:EG13791" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77790" + ], + [ + "gene_synonym", + "GI:16129447" + ], + [ + "gene_synonym", + "NP_416005.1" + ], + [ + "gene_synonym", + "b1488" + ], + [ + "gene_synonym", + "ECK1482" + ] + ], + "dna_sequence": "ATGTCGGATACCACCGAACTGGTTGATTTAGCCGTAATCTTCCCTGATCTGGAGATCGAATTGAAATACGCCTGCGCTGATAACATCACAGGTAAAGCTATTTATCAGCAAGCGCGTTGTCTGTTACACAAGGATGCGATTACCGCGCTGGCGAAAAGTATCAGCATCGCCCAGCTGTCAGGGTTACAACTGGTGATTTACGATGCGTATCGCCCACAACAAGCACAGGCGATGTTGTGGCAAGCCTGCCCAGACCCGCAATATGTTGTTGATGTGACGGTCGGTTCTAATCACAGCCGTGGCACGGCGATCGACCTGACGCTTCGTGATGAGCACGGGAACATCCTCGATATGGGCGCAGGGTTCGATGAAATGCACGAGCGCTCCCATGCCTATCACCCTTCCGTCCCGCCCGCCGCTCAGCGCAATCGGCTGTTGCTGAATGCGATAATGACTGGTGGCGGTTTTGTCGGTATCTCCAGCGAATGGTGGCACTTCGAATTACCCCAGGCAGCGAGTTACCCTCTGCTCGCTGATCAATTCTCTTGTTTTATATCCCCTGGCACACAGCACGTCAGTTAA", + "dna_sequence_length": 582, + "functions": [ + "D-ala-D-ala dipeptidase, Zn-dependent" + ], + "id": "CDS_1475", + "location": [ + [ + "NC_000913", + 1563076, + "-", + 582 + ] + ], + "md5": "310fcb526b64fc74a1ec482345217742", + "parent_gene": "", + "protein_md5": "aaa12b35867f101c0057294ada43f71f", + "protein_translation": "MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILDMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGISSEWWHFELPQAASYPLLADQFSCFISPGTQHVS", + "protein_translation_length": 193, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW1484" + ], + [ + "gene_synonym", + "GI:162135902" + ], + [ + "gene_synonym", + "yddU" + ], + [ + "gene_synonym", + "ASAP:ABE-0004963" + ], + [ + "gene_synonym", + "NP_416006.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76129" + ], + [ + "gene_synonym", + "dos" + ], + [ + "gene_synonym", + "dosP" + ], + [ + "gene_synonym", + "ECK1483" + ], + [ + "gene_synonym", + "b1489" + ], + [ + "gene_synonym", + "GeneID:945815" + ], + [ + "gene_synonym", + "EcoGene:EG13792" + ] + ], + "dna_sequence": "ATGAAGCTAACCGATGCGGATAATGCCGCCGATGGCATTTTTTTCCCCGCCCTTGAGCAAAATATGATGGGTGCGGTGTTAATTAACGAAAATGATGAAGTGATGTTTTTCAACCCCGCCGCAGAGAAGCTCTGGGGATACAAACGTGAAGAAGTCATTGGCAATAACATTGATATGCTGATTCCGCGGGATTTGCGTCCTGCGCATCCTGAATACATTCGTCACAACCGTGAAGGCGGTAAAGCGCGTGTTGAGGGGATGAGTCGGGAGCTGCAGCTGGAGAAAAAAGACGGCAGTAAAATCTGGACCCGTTTTGCGCTATCGAAAGTGAGCGCCGAGGGGAAAGTTTATTACCTGGCGCTGGTACGGGATGCCAGCGTAGAAATGGCGCAAAAAGAACAGACCCGACAATTGATTATTGCCGTTGACCATCTCGACCGACCGGTGATTGTCCTCGATCCGGAACGCCATATTGTGCAGTGCAATCGCGCATTTACCGAAATGTTTGGTTACTGCATTAGCGAAGCCAGCGGTATGCAGCCCGATACACTCCTGAACATTCCTGAATTCCCTGCCGATAACCGCATTCGTTTACAACAGTTGCTATGGAAAACCGCCCGCGATCAGGACGAATTTCTGCTGTTGACGCGCACCGGTGAAAAAATCTGGATTAAAGCCTCTATCAGCCCGGTTTATGACGTGCTCGCGCATCTGCAGAACCTGGTAATGACTTTCTCGGATATCACCGAAGAACGGCAGATTCGCCAGCTTGAAGGCAATATTCTCGCCGCCATGTGCAGCAGCCCGCCATTTCATGAAATGGGGGAAATCATTTGTCGTAACATCGAATCTGTACTCAACGAATCGCATGTTTCGCTGTTCGCACTGCGCAACGGGATGCCGATACACTGGGCGTCATCTTCCCACGGTGCAGAAATTCAAAATGCGCAAAGCTGGTCAGCGACCATTCGTCAGCGTGATGGCGCGCCTGCGGGGATCCTGCAAATTAAAACCTCGTCAGGAGCAGAAACCAGCGCCTTTATCGAACGCGTGGCAGATATCAGCCAGCATATGGCCGCGCTGGCGCTGGAACAGGAAAAAAGCCGTCAGCATATTGAACAACTCATCCAATTTGATCCGATGACCGGTCTGCCAAATCGCAATAACCTGCACAATTACCTCGATGACCTGGTCGACAAAGCCGTCTCTCCCGTGGTGTATCTCATCGGTGTTGACCATATTCAGGATGTGATTGATAGCCTTGGCTATGCGTGGGCCGATCAGGCATTGCTGGAAGTGGTCAATCGCTTTCGTGAAAAACTCAAACCGGATCAGTATCTCTGTCGTATCGAAGGTACGCAGTTTGTCCTCGTGAGCCTCGAAAACGACGTCAGTAACATTACCCAAATCGCCGATGAGCTACGGAATGTGGTCAGCAAGCCGATAATGATTGACGATAAACCCTTCCCGCTTACCTTGAGTATTGGCATCAGCTACGACCTGGGTAAAAACCGCGATTACTTGCTCTCCACTGCTCACAATGCAATGGATTATATTCGCAAGAATGGCGGTAACGGCTGGCAGTTCTTCAGCCCGGCGATGAACGAAATGGTAAAAGAGCGTTTGGTTTTAGGCGCAGCGCTGAAAGAAGCGATTAGCAATAACCAACTGAAACTGGTTTACCAGCCGCAAATCTTCGCAGAAACGGGTGAACTGTACGGCATCGAAGCCCTTGCTCGCTGGCACGATCCCCTGCATGGTCATGTGCCCCCTTCACGGTTTATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCGGAAGCTTGCCGTCAGTTAGCAGAATGGCGTAGCCAGAATATTCATATCCCGGCGTTATCCGTGAACTTGTCGGCGCTGCACTTTCGCAGTAATCAACTGCCTAATCAGGTGTCTGATGCAATGCACGCCTGGGGTATTGACGGCCACCAGCTGACGGTAGAAATCACGGAAAGCATGATGATGGAACACGATACCGAAATCTTTAAGCGCATTCAGATCCTGCGTGATATGGGCGTGGGCTTATCGGTAGATGATTTTGGTACGGGCTTTTCCGGATTATCCCGCTTAGTCAGTCTTCCGGTAACGGAAATCAAAATTGACAAAAGTTTTGTCGATCGTTGTCTGACCGAAAAACGCATCCTTGCCTTACTTGAAGCCATTACCAGCATTGGGCAAAGCCTCAATTTAACCGTCGTGGCGGAAGGCGTCGAAACCAAAGAGCAATTTGAGATGCTACGCAAGATCCACTGTCGCGTTATTCAGGGATATTTCTTTTCCCGCCCCCTACCCGCCGAAGAAATTCCAGGCTGGATGAGCAGCGTGTTACCGCTGAAAATCTGA", 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"MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI", + "protein_translation_length": 799, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA89" + ], + [ + "gene_synonym", + "JW5241" + ], + [ + "gene_synonym", + "NP_416007.3" + ], + [ + "gene_synonym", + "dosC" + ], + [ + "gene_synonym", + "ASAP:ABE-0004965" + ], + [ + "gene_synonym", + "b1490" + ], + [ + "gene_synonym", + "GI:145698262" + ], + [ + "gene_synonym", + "yddV" + ], + [ + "gene_synonym", + "GeneID:945835" + ], + [ + "gene_synonym", + "ECK1484" + ], + [ + "gene_synonym", + "EcoGene:EG13793" + ] + ], + "dna_sequence": "ATGGAGATGTATTTTAAAAGAATGAAAGATGAGTGGACCGGACTTGTCGAACAGGCAGATCCGCCCATTCGTGCTAAAGCCGCGGAAATTGCCGTTGCGCATGCTCATTATCTGAGTATCGAGTTTTATCGAATTGTCCGCATCGACCCGCATGCCGAAGAATTCTTGAGTAATGAACAAGTTGAGCGGCAGTTGAAGAGTGCGATGGAACGCTGGATTATTAACGTGCTTTCTGCCCAGGTTGACGATGTCGAAAGGCTAATACAAATCCAGCATACCGTCGCGGAAGTGCATGCCCGCATAGGAATTCCGGTAGAAATTGTCGAGATGGGGTTTCGGGTGCTGAAAAAAATCCTCTATCCGGTGATCTTCTCTTCGGATTATTCCGCCGCAGAAAAACTTCAGGTCTACCATTTCTCGATTAACAGTATTGATATCGCGATGGAAGTGATGACTCGCGCGTTTACCTTTAGTGACAGTAGTGCCTCAAAGGAAGATGAAAACTATCGTATCTTCTCGTTACTGGAAAACGCCGAAGAAGAAAAAGAACGGCAAATAGCCTCAATACTTTCATGGGAAATAGATATTATCTATAAAATCCTGCTGGATTCTGATTTAGGCAGTAGTTTGCCTTTAAGCCAGGCTGATTTTGGCCTGTGGTTTAACCATAAAGGTCGACATTATTTTAGTGGTATTGCCGAAGTAGGCCATATCTCCCGTCTGATTCAGGATTTCGACGGTATTTTCAATCAAACCATGCGTAACACCAGAAATTTGAATAACAGAAGTCTGCGGGTGAAATTTTTATTACAGATAAGAAATACCGTATCGCAAATTATTACCTTGCTGCGTGAATTGTTTGAAGAAGTATCGCGCCACGAAGTCGGTATGGATGTACTGACGAAATTACTTAACCGCCGTTTCCTACCGACTATCTTCAAACGCGAAATTGCCCATGCCAACCGGACCGGTACACCGCTGTCAGTGCTGATTATTGACGTTGATAAATTCAAAGAGATCAACGATACGTGGGGCCATAACACTGGTGATGAAATTCTGCGTAAAGTCTCTCAGGCCTTTTATGACAACGTCCGCAGTAGTGATTATGTTTTCCGCTACGGGGGCGATGAATTTATCATTGTTTTGACTGAAGCTTCTGAAAACGAAACGTTACGTACCGCAGAACGTATTCGCAGTCGGGTGGAGAAAACCAAACTGAAAGCCGCAAACGGCGAAGATATTGCCCTCTCACTTTCCATCGGTGCCGCCATGTTTAATGGTCATCCTGACTATGAGCGCCTCATTCAAATAGCCGATGAAGCTCTGTATATCGCCAAAAGACGAGGTAGAAACCGTGTTGAACTCTGGAAAGCCAGTCTTTAG", + "dna_sequence_length": 1383, + "functions": [ + "diguanylate cyclase, cold- and stationary phase-induced oxygen-dependent biofilm regulator" + ], + "id": "CDS_1477", + "location": [ + [ + "NC_000913", + 1567140, + "-", + 1383 + ] + ], + "md5": "4fc52d497df8bdb7ff4c0f699e411efc", + "parent_gene": "", + "protein_md5": "b2cd9c6510aebc7d393c832dbc8f0778", + "protein_translation": "MEMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL", + "protein_translation_length": 460, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW1486" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64426" + ], + [ + "gene_synonym", + "yddW" + ], + [ + "gene_synonym", + "b1491" + ], + [ + "gene_synonym", + "ASAP:ABE-0004970" + ], + [ + "gene_synonym", + "GeneID:945975" + ], + [ + "gene_synonym", + "NP_416008.1" + ], + [ + "gene_synonym", + "EcoGene:EG13794" + ], + [ + "gene_synonym", + "ECK1485" + ], + [ + "gene_synonym", + "GI:16129450" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_416009.1" + ], + [ + "gene_synonym", + "gadC" + ], + [ + "gene_synonym", + "EcoGene:EG12456" + ], + [ + "gene_synonym", + "GI:16129451" + ], + [ + "gene_synonym", + "ECK1486" + ], + [ + "gene_synonym", + "GeneID:946057" + ], + [ + "gene_synonym", + "ASAP:ABE-0004973" + ], + [ + "gene_synonym", + "acsA" + ], + [ + "gene_synonym", + "xasA" + ] + ], + "dna_sequence": 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"EcoGene:EG11490" + ], + [ + "gene_synonym", + "ASAP:ABE-0004976" + ], + [ + "gene_synonym", + "JW1488" + ], + [ + "gene_synonym", + "NP_416010.1" + ], + [ + "gene_synonym", + "gadB" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69910" + ], + [ + "gene_synonym", + "ECK1487" + ], + [ + "gene_synonym", + "GeneID:946058" + ], + [ + "gene_synonym", + "GI:16129452" + ] + ], + "dna_sequence": 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"MEIIMRNLCFLLTLVATLLLPGRLIAAALPQDEKLITGQLDNGLRYMIYPHAHPKDQVNLWLQIHTGSLQEEDNELGVAHFVEHMMFNGTKTWPGNKVIETFESMGLRFGRDVNAYTSYDETVYQVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEVDAERGVITEEWRAHQDAKWRTSQARRPFLLANTRNLDREPIGLMDTVATVTPAQLRQFYQRWYQPNNMTFIVVGDIDSKEALALIKDNLSKLPANKAAENRVWPTKAENHLRFNIINDKENRVNGIALYYRLPMVQVNDEQSFIEQAEWSMLVQLFNQRLQERIQSGELKTISGGTARSVKIAPDYQSLFFRVNARDDNMQDAANALMAELATIDQHGFSAEELDDVKSTRLTWLKNAVDQQAERDLRMLTSRLASSSLNNTPFLSPEETYQLSKRLWQQITVQSLAEKWQQLRKNQDAFWEQMVNNEVAAKKALSPAAILALEKEYANKKLAAYVFPGRNLSLTVDADPQAEISSKETLAENLTSLTLSNGARVILAKSAGEEQKLQIIAVSNKGDLSFPAQQKSLIALANKAVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMNTLLSVSARTNNPEPGFQLINQRITHSTINDNIWASLQNAQIQALKTLDQRPAEKFAQQMYETRYADDRTKLLQENQIAQFTAADALAADRQLFSSPADITFVIVGNVAEDKLVALITRYLGSIKHSDSPLAAGKPLTRATDNASVTVKEQNEPVAQVSQWKRYDSRTPVNLPTRMALDAFNVALAKDLRVNIREQASGAYSVSSRLSVDPQAKDISHLLAFTCQPERHDELLTLANEVMVKRLAKGISEQELNEYQQNVQRSLDIQQRSVQQLANTIVNSLIQYDDPAAWTEQEQLLKQMTVENVNTAVKQYLSHPVNTYTGVLLPK", + "protein_translation_length": 931, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31827" + ], + [ + "gene_synonym", + "GeneID:945961" + ], + [ + "gene_synonym", + "JW1490" + ], + [ + "gene_synonym", + "EcoGene:EG11743" + ], + [ + "gene_synonym", + "b1495" + ], + [ + "gene_synonym", + "ASAP:ABE-0004982" + ], + [ + "gene_synonym", + "ECK1489" + ], + [ + "gene_synonym", + "GI:16129454" + ], + [ + "gene_synonym", + "yddB" + ], + [ + "gene_synonym", + "NP_416012.1" + ] + ], + "dna_sequence": 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"EcoGene:EG11742" + ], + [ + "gene_synonym", + "ASAP:ABE-0004984" + ], + [ + "gene_synonym", + "b1496" + ], + [ + "gene_synonym", + "GeneID:945945" + ], + [ + "gene_synonym", + "NP_416013.1" + ], + [ + "gene_synonym", + "GI:16129455" + ], + [ + "gene_synonym", + "ECK1490" + ], + [ + "gene_synonym", + "yddA" + ] + ], + "dna_sequence": "ATGATAACCATTCCCATTACGCTTCGTATGTTGATAGCAAAGTATCTCTGTCTGTTGAAGCCCTTTTGGCTGCGTAAGAATAATAAAACTTCAGTGTTGTTAATCATTATTATCCTCGCCATGATCCTTGGCGTGGTTAAAATTCAGGTCTGGTTAAACGACTGGAATAATGATTTTTTCAATGCGCTAAGCCAGAAAGAAACCGATAAGCTTTGGCAGCTTGTCCTTTGGTTCCCTGCCCTGCTGGGGATCTTTGTATTAATATCCGTAAACAAAACATGGTTAATTAAACTACTGACTATTCGCTGGCGCGAATGGTTAACAGATTACTACCTTAATCGGTGGTTTGCAGATAAAAACTACTACTTCACGCAGATCTACGGCGAGCATAAAAATACAGATAACCCTGACCAACGTATCGCTGAAGACATTCTCTTACTGATCAGCAAAACGCTCAGTCTTTCATTTGGCTTCATCCAGTCACTTAGCATGCTGATCACCTTTACCGTTATTCTTTGGGAAAGCGCGGGTACGCTCTCATTCACTGTTGGTGGAACAGAATGGAATATCCAGGGGTATATGGTCTATACCGTCGTGCTCATTGTGATCGGTGGAACTTTATTTACCCATAAGGTGGGTAAACGTATTCGTCCGCTTAATGTGGAAAAACAACGTAGCGAAGCGACATTTCGAACAAATCTTGTGCAGCATAATAAGCAGGCAGAACTGATTGCGCTAAGCAATGCTGAGTCTCTACAACGCCAGGAGTTGAGCGACAATTTTCATACCATTAAAGAGAACTGGCATCGTTTAATGAATCGTCAGCGGTGGCTTGATTACTGGCAGAATATTTATTCGCGCTCGCTTAGCGTTCTTCCCTACTTTCTGTTATTGCCGCAGTTTATTAGCGGGCAGATCAATCTGGGCGGACTGATGAAATCGCGCCAGGCATTTATGCTGGTATCGAACAATTTAAGCTGGTTTATTTATAAATATGACGAACTTGCTGAACTGGCTGCGGTTATCGATCGCTTGTATGAGTTCCATCAACTCACTGAACAGCGCCCTACGAATAAGCCTAAAAATTGCCAACATGCGGTACAAGTGGCTGATGCGAGTATTCGTACGCCTGATAATAAGATCATATTAGAGAACCTGAACTTTCATGTTTCGCCAGGCAAATGGCTATTACTGAAAGGCTACTCTGGCGCGGGAAAAACCACACTGCTTAAAACATTATCCCACTGCTGGCCGTGGTTTAAAGGTGATATTTCTTCTCCTGCTGACAGTTGGTATGTGTCACAAACACCGTTAATCAAAACCGGCTTACTGAAAGAGATTATTTGTAAAGCACTTCCCCTGCCCGTAGACGATAAATCGTTGAGCGAAGTACTGCATCAGGTTGGTCTTGGGAAATTGGCTGCGCGTATTCATGACCACGATCGCTGGGGAGATATTCTTTCCAGCGGCGAAAAACAACGTATCGCCCTGGCACGATTAATTTTACGACGTCCGAAATGGATATTTCTTGACGAAACTACCTCTCATCTTGAGGAACAAGAGGCTATCCGCTTACTGCGTTTAGTGCGTGAAAAACTACCCACAAGCGGCGTCATTATGGTTACACATCAACCCGGTGTCTGGAACCTGGCCGATGATATTTGTGACATTAGCGCGGTTTTATAA", 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"gene_synonym", + "GI:90111285" + ], + [ + "gene_synonym", + "JW1492" + ], + [ + "gene_synonym", + "ASAP:ABE-0004986" + ], + [ + "gene_synonym", + "b1497" + ], + [ + "gene_synonym", + "NP_416014.4" + ], + [ + "gene_synonym", + "GeneID:945981" + ], + [ + "gene_synonym", + "ydeM" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76134" + ], + [ + "gene_synonym", + "EcoGene:EG13795" + ], + [ + "gene_synonym", + "ECK1491" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:945957" + ], + [ + "gene_synonym", + "NP_416015.2" + ], + [ + "gene_synonym", + "ydeN" + ], + [ + "gene_synonym", + "GI:90111286" + ], + [ + "gene_synonym", + "EcoGene:EG13796" + ], + [ + "gene_synonym", + "ECK1492" + ] + ], + "dna_sequence": "ATGAAGTCTGCATTAAAGAAAAGTGTCGTAAGTACCTCGATATCTTTGATACTGGCATCTGGTATGGCTGCATTTGCTGCTCATGCGGCAGATGATGTAAAGCTGAAAGCAACCAAAACAAACGTTGCTTTCTCAGACTTTACGCCGACAGAATACAGTACCAAAGGAAAGCCAAATATTATCGTACTGACCATGGATGATCTTGGTTATGGACAACTTCCTTTTGATAAGGGATCTTTTGACCCAAAAACAATGGAAAATCGTGAAGTTGTCGATACCTACAAAATAGGGATAGATAAAGCCATTGAAGCTGCACAAAAATCAACGCCGACGCTCCTTTCATTAATGGATGAAGGCGTACGTTTTACTAACGGCTATGTGGCACACGGTGTTTCCGGCCCCTCCCGCGCCGCAATAATGACCGGTCGAGCTCCCGCCCGCTTTGGTGTCTATTCCAATACCGATGCTCAGGATGGTATTCCGCTAACAGAAACTTTCTTGCCTGAATTATTCCAGAATCATGGTTATTACACTGCAGCAGTAGGTAAATGGCACTTGTCAAAAATCAGTAATGTGCCGGTACCGGAAGATAAACAAACGCGTGACTATCATGACAACTTCACCACATTTTCTGCGGAAGAATGGCAACCTCAAAACCGTGGCTTTGATTACTTTATGGGATTCCACGCTGCAGGAACGGCATATTACAACTCCCCTTCACTGTTCAAAAATCGTGAACGTGTCCCCGCAAAAGGTTATATCAGCGATCAGTTAACCGATGAGGCAATTGGCGTTGTTGATCGTGCCAAAACACTTGACCAGCCTTTTATGCTTTACCTGGCTTATAATGCTCCGCACCTGCCAAATGATAATCCTGCACCGGATCAATATCAGAAGCAATTTAATACCGGTAGTCAAACAGCAGATAACTACTACGCTTCCGTTTATTCTGTTGATCAGGGTGTAAAACGCATTCTCGAACAACTGAAGAAAAACGGACAGTATGACAATACAATTATTCTCTTTACCTCCGATAATGGTGCGGTTATCGATGGTCCTCTGCCGCTGAACGGGGCGCAAAAAGGCTATAAGAGTCAGACCTATCCTGGCGGTACTCACACCCCAATGTTTATGTGGTGGAAAGGAAAACTTCAACCCGGTAATTATGACAAGCTGATTTCCGCAATGGATTTCTACCCGACAGCTCTTGATGCAGCCGATATCAGCATTCCAAAAGACCTTAAGCTGGATGGCGTTTCCTTGCTGCCCTGGTTGCAAGATAAGAAACAAGGCGAGCCACATAAAAATCTGACCTGGATAACCTCTTATTCTCACTGGTTTGACGAGGAAAATATTCCATTCTGGGATAATTACCACAAATTTGTTCGCCATCAGTCAGACGATTACCCGCATAACCCCAACACTGAGGACTTAAGCCAATTCTCTTATACGGTGAGAAATAACGATTATTCGCTTGTCTATACAGTAGAAAACAATCAGTTAGGTCTCTACAAACTGACGGATCTACAGCAAAAAGATAACCTTGCCGCCGCCAATCCGCAGGTCGTTAAAGAGATGCAAGGCGTGGTAAGAGAGTTTATCGACAGCAGCCAGCCACCGCTTAGCGAGGTAAATCAGGAGAAGTTTAACAATATCAAGAAAGCACTAAGCGAAGCGAAATAA", 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"gene_synonym", + "b1499" + ], + [ + "gene_synonym", + "JW1494" + ], + [ + "gene_synonym", + "GeneID:945922" + ], + [ + "gene_synonym", + "ydeO" + ], + [ + "gene_synonym", + "GI:16129458" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76135" + ], + [ + "gene_synonym", + "EcoGene:EG13797" + ], + [ + "gene_synonym", + "NP_416016.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0004992" + ], + [ + "gene_synonym", + "ECK1493" + ] + ], + "dna_sequence": 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"2182223141f739424f3b05abf3ba537b", + "parent_gene": "", + "protein_md5": "708dfdb2806673304fce02223e94fba4", + "protein_translation": "MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFTENTIKKYLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEERNHHNFSELLLFSCLSIFAACKGFITLLTNGVLSVSGKVRNIVNMKPAHPWKLKDICDCLYISESLLKKKLKQEQTTFSQILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVSKEYRCQSHTGMNTGNTMNALAI", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG14466" + ], + [ + "gene_synonym", + "ECK4475" + ], + [ + "gene_synonym", + "safA" + ], + [ + "gene_synonym", + "GI:16129459" + ], + [ + "gene_synonym", + "b1500" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76136" + ], + [ + "gene_synonym", + "yneN" + ], + [ + "gene_synonym", + "NP_416017.1" + ], + [ + "gene_synonym", + "GeneID:946061" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:946055" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77561" + ], + [ + "gene_synonym", + "EcoGene:EG13798" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P76141" + ], + [ + "gene_synonym", + "ydeW" + ], + [ + "gene_synonym", + "ASAP:ABE-0005045" + ], + [ + "gene_synonym", + "ECK1505" + ], + [ + "gene_synonym", + "EcoGene:EG13805" + ], + [ + "gene_synonym", + "lsrR" + ], + [ + "gene_synonym", + "b1512" + ], + [ + "gene_synonym", + "GI:16129471" + ], + [ + "gene_synonym", + "GeneID:946070" + ], + [ + "gene_synonym", + "NP_416029.1" + ] + ], + "dna_sequence": 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"functions": [ + "lsr operon transcriptional repressor" + ], + "id": "CDS_1498", + "location": [ + [ + "NC_000913", + 1601241, + "-", + 954 + ] + ], + "md5": "792d96a4d3fb71f855a24dfbb3130beb", + "parent_gene": "", + "protein_md5": "3c73933c9d6e747ef6c5b84b70ff8e1b", + "protein_translation": "MTINDSAISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGIIRVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRLGIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIGQLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGAVGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAILRS", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "lsrA" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77257" + ], + [ + "gene_synonym", + "JW1506" + ], + [ + "gene_synonym", + "ydeX" + ], + [ + "gene_synonym", + "ECK1506" + ], + [ + "gene_synonym", + "GeneID:945680" + ], + [ + "gene_synonym", + "ASAP:ABE-0005056" + ], + [ + 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"putative membrane-bound diguanylate cyclase" + ], + "id": "CDS_1508", + "location": [ + [ + "NC_000913", + 1611854, + "-", + 948 + ] + ], + "md5": "55e19692ee62181138828d1b219835a4", + "parent_gene": "", + "protein_md5": "0afc34881eada4d2ebde56e2a306650f", + "protein_translation": "MLADWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAFPLPALIWCAVRYTPQVTCLLTFVTGAVEIVLVANSVIDISVGSPFSIPQMFSARLGIATMAICPIMVSFSVAAINSLMKQVALRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTVMLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYLTLTDDFNKLMVEADTCLYRSKKDGRNRTSTMRYGEEVV", + "protein_translation_length": 315, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW1516" + ], + [ + "gene_synonym", + "ECK1516" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76148" + ], + [ + "gene_synonym", + "b1523" + ], + [ + "gene_synonym", + "GeneID:946171" + ], + [ + "gene_synonym", + "GI:16129482" + ], + [ + "gene_synonym", + "EcoGene:EG13815" + ], + [ + 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"gene_synonym", + "GeneID:946080" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0005137" + ], + [ + "gene_synonym", + "b1539" + ], + [ + "gene_synonym", + "GI:16129498" + ], + [ + "gene_synonym", + "NP_416057.1" + ], + [ + "gene_synonym", + "GeneID:946085" + ] + ], + "dna_sequence": "ATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCGCCACTGGCCGTCGCCAGGAACGGTTGCAGGAGTTAAAAGACGAACTGGGAGATAATCTGTATATCGCCCAACTGGACGTTCGCAACCGCGCCGCTATTGAAGAGATGCTGGCATCGCTTCCTGCCGAGTGGTGCAATATTGATATCCTGGTAAATAATGCCGGCCTGGCGTTGGGCATGGAGCCTGCGCATAAAGCCAGCGTTGAAGACTGGGAAACGATGATTGATACCAACAACAAAGGCCTGGTATATATGACGCGCGCCGTCTTACCGGGTATGGTTGAACGTAATCATGGTCATATTATTAACATTGGCTCAACGGCAGGTAGCTGGCCGTATGCCGGTGGTAACGTTTACGGTGCGACGAAAGCGTTTGTTCGTCAGTTTAGCCTGAATCTGCGTACGGATCTGCATGGTACGGCGGTGCGCGTCACCGACATCGAACCGGGTCTGGTGGGTGGTACCGAGTTTTCCAATGTCCGCTTTAAAGGCGATGACGGTAAAGCAGAAAAAACCTATCAAAATACCGTTGCATTGACGCCAGAAGATGTCAGCGAAGCCGTCTGGTGGGTGTCAACGCTGCCTGCTCACGTCAATATCAATACCCTGGAAATGATGCCGGTTACCCAAAGCTATGCCGGACTGAATGTCCACCGTCAGTAA", + 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"gene_synonym", + "GI:16129499" + ], + [ + "gene_synonym", + "b1540" + ], + [ + "gene_synonym", + "EcoGene:EG13820" + ], + [ + "gene_synonym", + "GeneID:946087" + ] + ], + "dna_sequence": "ATGACCGTCGAAACGCAACTTAATCCCACACAGCCTGTCAATCAGCAGATTTATCGTATTCTTCGTCGCGACATTGTCCATTGCCTGATTGCTCCAGGCACACCGTTGTCGGAAAAAGAAGTTTCTGTTCGTTTCAATGTGTCACGCCAGCCGGTTCGTGAAGCCTTTATTAAACTGGCGGAAAACGGCCTGATTCAAATTCGTCCGCAACGTGGCAGCTACGTCAACAAAATTTCCATGGCCCAGGTGCGCAACGGCAGTTTTATCCGTCAGGCCATTGAGTGCGCGGTGGCGCGTCGGGCGGCGAGCATGATTACCGAAAGCCAGTGCTATCAACTGGAACAAAATCTTCACCAGCAACGCATTGCCATTGAGCGCAAGCAACTGGATGATTTTTTTGAACTTGATGACAACTTCCATCAACTCCTGACGCAGATTGCCGACTGTCAACTGGCGTGGGATACCATTGAGAACCTGAAAGCGACCGTTGATCGCGTGCGCTATATGAGTTTCGACCACGTTTCTCCACCAGAAATGCTGTTACGCCAGCATCTTGATATTTTCTCTGCCCTGCAAAAACGTGATGGCGATGCGGTAGAACGTGCAATGACGCAACATTTGCAGGAAATCAGCGAATCCGTGCGCCAGATCCGCCAGGAAAACAGCGACTGGTTTAGCGAAGAGTAA", + "dna_sequence_length": 687, + "functions": [ + "transcriptional repressor for rspAB" + ], + "id": "CDS_1527", + "location": [ + [ + "NC_000913", + 1628352, + "+", + 687 + ] + ], + "md5": "348b0b5c06ba69934377c5512bce2c6b", + "parent_gene": "", + "protein_md5": "d8e4d217b3abef1f1d4da4fef71a7ef7", + "protein_translation": "MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIRQENSDWFSEE", + "protein_translation_length": 228, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:948796" + ], + [ + "gene_synonym", + "ECK1534" + ], + [ + "gene_synonym", + "JW1534" + ], + [ + "gene_synonym", + "ASAP:ABE-0005147" + ], + [ + "gene_synonym", + "NP_416059.1" + ], + [ + "gene_synonym", + "EcoGene:EG13838" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64463" + ], + [ + "gene_synonym", + "GI:16129500" + ], + [ + "gene_synonym", + "b1541" + ], + [ + "gene_synonym", + "ydfZ" + ] + ], + "dna_sequence": 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"gene_synonym", + "UniProtKB/Swiss-Prot:P77374" + ], + [ + "gene_synonym", + "ynfE" + ], + [ + "gene_synonym", + "GeneID:946135" + ], + [ + "gene_synonym", + "JW1579" + ], + [ + "gene_synonym", + "GI:16129545" + ], + [ + "gene_synonym", + "NP_416104.1" + ] + ], + "dna_sequence": 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"b1589" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAJ1" + ], + [ + "gene_synonym", + "GI:16129547" + ], + [ + "gene_synonym", + "NP_416106.1" + ], + [ + "gene_synonym", + "GeneID:945638" + ], + [ + "gene_synonym", + "ynfG" + ], + [ + "gene_synonym", + "EcoGene:EG13845" + ], + [ + "gene_synonym", + "JW1581" + ] + ], + "dna_sequence": "ATGACCACACAATATGGATTTTTTATCGATTCCAGCCGCTGTACTGGCTGTAAAACCTGCGAACTGGCGTGCAAAGATTTTAAAGATCTTGGCCCGGAAGTCAGTTTCCGCCGTATTTATGAATACGCTGGCGGCGACTGGCAGGAAGATAATGGCGTCTGGCACCAGAACGTGTTCGCTTATTATCTCTCCATCTCCTGTAACCATTGCGATGACCCCGCATGTACAAAAGTCTGCCCCAGCGGCGCAATGCATAAGCGTGAAGATGGCTTTGTGGTGGTTGATGAAGATGTTTGTATCGGCTGCCGCTACTGCCACATGGCTTGTCCGTACGGCGCGCCACAGTACAATGCTGAAAAAGGGCACATGACGAAGTGCGATGGTTGTTATTCGCGCGTCGCCGAGGGGAAACAACCCATATGTGTCGAATCCTGCCCGCTGCGTGCACTTGAGTTCGGTCCAATTGAAGAGCTGCGCCAGAAGCACGGCACTCTTGCTGCCGTCGCGCCACTGCCGCGCGCGCATTTCACAAAACCCAATATCGTTATCAAACCTAACGCCAACAGCCGCCCGACCGGCGATACCACTGGTTATCTGGCTAATCCGGAGGAAGTGTAA", + "dna_sequence_length": 618, + 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"ATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTCCCGAACTTGACGGCGGTATCTTTACCTATGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTATCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCAATCGATAGTCGGTGCATCGGCTTTATTGTGGATTGTTCACTTTTTGATCCTGCGCGGGGTGCAAACCGCTGCCAGCATTAACCTGGTGGCGACACTGGCAAAATTGTTGCCGCTGGGTCTGTTTGTTGTGCTGGCGATGATGATGTTCAAACTGGATACCTTCAAGCTCGACTTCACCGGACTTGCACTTGGCGTACCCGTTTGGGAACAGGTGAAAAACACCATGCTGATCACCCTGTGGGTTTTCATTGGTGTGGAAGGTGCCGTGGTTGTTTCTGCGCGTGCGCGTAATAAACGTGATGTTGGCAAAGCGACACTGCTGGCGGTTCTCTCCGCTCTGGGCGTTTACTTGCTGGTAACGCTGCTTTCGCTGGGTGTGGTGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGACCATGGGGCGAAATCATCATCGCTGCCGGTTTGATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATGGCAGCAGAAGTACCGTTCCTGGCCGCCACTCATAAAGCATTCCCGCGCATTTTTGCGCGCCAGAACGCACAAGCTGCGCCATCCGCCTCACTGTGGTTGACCAACATCTGCGTGCAAATTTGTCTGGTACTCATCTGGCTGACCGGTTCCGATTACAACACGTTGCTGACCATCGCCTCAGAAATGATTCTGGTGCCCTATTTCCTGGTCGGCGCGTTCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCTCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCATACCCATGATAATGTACTGAACCGTCAGGAAATGGTGCTGATTGGCATGCTGTTAATTGCCTCAGTTCCGGCGACCTGGATGCTGGTGGGATAA", 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"b1606" + ], + [ + "gene_synonym", + "ydgB" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFS3" + ], + [ + "gene_synonym", + "ECK1601" + ], + [ + "gene_synonym", + "JW1598" + ], + [ + "gene_synonym", + "folM" + ], + [ + "gene_synonym", + "GI:16129564" + ], + [ + "gene_synonym", + "GeneID:949096" + ], + [ + "gene_synonym", + "ASAP:ABE-0005364" + ] + ], + "dna_sequence": 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"parent_gene": "", + "protein_md5": "e24b22186b29bbe648b6dc199c53d44b", + "protein_translation": "MGKTQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLINAGAQCIQADFSTNDGVMAFADEVLKSTHGLRAILHNASAWMAEKPGAPLADVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDNMTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLTSCFVTGRSFPLDGGRHLR", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:945156" + ], + [ + "gene_synonym", + "b1607" + ], + [ + "gene_synonym", + "JW1599" + ], + [ + "gene_synonym", + "EcoGene:EG13191" + ], + [ + "gene_synonym", + "NP_416124.1" + ], + [ + "gene_synonym", + "ECK1602" + ], + [ + "gene_synonym", + "GI:16129565" + ], + [ + "gene_synonym", + "ydgC" + ], + [ + "gene_synonym", + "ASAP:ABE-0005366" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACX0" + ] + ], + "dna_sequence": "ATGGGGCTGGTAATCAAAGCCGCGCTCGGTGCGCTGGTAGTGCTGTTGATTGGTGTTTTAGCAAAAACGAAAAATTATTATATCGCCGGGCTGATTCCACTTTTCCCGACCTTTGCGCTTATCGCGCATTATATTGTTGCCAGCGAACGCGGCATTGAAGCCTTACGCGCAACCATCATTTTTAGTATGTGGTCGATTATTCCCTATTTTGTTTACCTGGTGTCGCTGTGGTATTTCACCGGAATGATGCGCTTGCCCGCCGCTTTTGTTGGTTCTGTTGCGTGTTGGGGGATAAGCGCATGGGTGTTGATTATATGCTGGATAAAGCTGCATTAA", + "dna_sequence_length": 336, + "functions": [ + "GlpM family inner membrane protein" + ], + "id": "CDS_1596", + "location": [ + [ + "NC_000913", + 1682030, + "-", + 336 + ] + ], + "md5": "02eb327c6107427668476cb8c04872e2", + "parent_gene": "", + "protein_md5": "b0b97b1fafbb337eb59c86e55531e4ce", + "protein_translation": "MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHYIVASERGIEALRATIIFSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWVLIICWIKLH", + "protein_translation_length": 111, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52108" + ], + [ + "gene_synonym", + "b1608" + ], + [ + "gene_synonym", + "NP_416125.2" + ], + [ + "gene_synonym", + "JW1600" + ], + [ + "gene_synonym", + "EcoGene:EG13190" + ], + [ + "gene_synonym", + "rstA" + ], + [ + "gene_synonym", + "urpT" + ], + [ + "gene_synonym", + "ECK1603" + ], + [ + "gene_synonym", + "GI:145698268" + ], + [ + "gene_synonym", + "ASAP:ABE-0005370" + ], + [ + "gene_synonym", + "GeneID:946199" + ] + ], + "dna_sequence": 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"d2bb197bf93306a063ee18864155420c", + "protein_translation": "MNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRENPDLVLLDIMLPGKDGMTICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQNEQATLTKGLQETSLTPYKALHFGTLTIDPINRVVTLANTEISLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAAEPYRIKTVRNKGYLFAPHAWE", + "protein_translation_length": 239, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:948870" + ], + [ + "gene_synonym", + "b1609" + ], + [ + "gene_synonym", + "NP_416126.1" + ], + [ + "gene_synonym", + "uspT" + ], + [ + "gene_synonym", + "EcoGene:EG11233" + ], + [ + "gene_synonym", + "JW1601" + ], + [ + "gene_synonym", + "ECK1604" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18392" + ], + [ + "gene_synonym", + "rstB" + ], + [ + "gene_synonym", + "GI:16129567" + ], + [ + "gene_synonym", + "ASAP:ABE-0005372" + ] + ], + "dna_sequence": 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+ [ + "gene_synonym", + "tus" + ], + [ + "gene_synonym", + "JW1602" + ], + [ + "gene_synonym", + "b1610" + ], + [ + "gene_synonym", + "GeneID:945135" + ], + [ + "gene_synonym", + "ECK1605" + ], + [ + "gene_synonym", + "GI:16129568" + ], + [ + "gene_synonym", + "NP_416127.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0005378" + ] + ], + "dna_sequence": 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replication at Ter, DNA-binding protein" + ], + "id": "CDS_1599", + "location": [ + [ + "NC_000913", + 1684259, + "+", + 930 + ] + ], + "md5": "a3a785324053b7e09fb092dbb00fe46a", + "parent_gene": "", + "protein_md5": "ed59bcb1634167857e53e941bd9f3c73", + "protein_translation": "MARYDLVDRLNTTFRQMEQELAIFAAHLEQHKLLVARVFSLPEVKKEDEHNPLNRIEVKQHLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQVDNLSQAALVSHIQHINKLKTTFEHIVTVESELPTAARFEWVHRHLPGLITLNAYRTLTVLHDPATLRFGWANKHIIKNLHRDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQDIAALPQNAKLKIKRPVKVQPIARVWYKGDQKQVQHACPTPLIALINRDNGAGVPDVGELLNYDADNVQHRYKPQAQPLRLIIPRLHLYVAD", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05042" + ], + [ + "gene_synonym", + "NP_416128.1" + ], + [ + "gene_synonym", + "b1611" + ], + [ + "gene_synonym", + "JW1603" + ], + [ + "gene_synonym", + "fumC" + ], + [ + "gene_synonym", + "ASAP:ABE-0005380" + ], + [ + "gene_synonym", + "GeneID:946147" + ], + [ + "gene_synonym", + "ECK1606" + ], + [ + "gene_synonym", + "GI:16129569" + ], + [ + "gene_synonym", + "EcoGene:EG10358" + ] + ], + "dna_sequence": 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"JW1604" + ], + [ + "gene_synonym", + "NP_416129.1" + ], + [ + "gene_synonym", + "fumA" + ], + [ + "gene_synonym", + "b1612" + ], + [ + "gene_synonym", + "ASAP:ABE-0005392" + ], + [ + "gene_synonym", + "ECK1607" + ], + [ + "gene_synonym", + "EcoGene:EG10356" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC33" + ] + ], + "dna_sequence": "ATGTCAAACAAACCCTTTCATTATCAGGCTCCTTTTCCACTCAAAAAAGATGATACTGAGTATTACCTGCTAACCAGCGAACACGTTAGCGTATCTGAATTTGAAGGGCAGGAGATTTTGAAAGTCGCACCCGAAGCGTTAACTCTGTTGGCGCGCCAGGCGTTTCATGATGCGTCGTTCATGCTGCGTCCGGCGCACCAACAACAGGTGGCCGACATTCTGCGTGACCCGGAGGCCAGCGAAAATGATAAATATGTGGCGCTGCAATTCCTGCGTAACTCCGACATCGCGGCGAAAGGCGTTCTGCCAACCTGTCAGGATACCGGCACCGCGATTATTGTTGGTAAAAAAGGGCAGCGTGTATGGACCGGTGGTGGTGATGAAGCGGCGCTGGCGCGCGGTGTCTATAACACTTATATCGAAGATAATCTGCGCTACTCGCAAAACGCGCCGCTGGATATGTATAAAGAAGTGAATACCGGCACCAATCTGCCAGCGCAGATCGATCTTTATGCCGTTGATGGCGACGAATACAAATTCCTCTGTATCGCCAAAGGTGGTGGTTCGGCAAACAAGACGTATCTCTATCAGGAAACCAAAGCGTTACTGACGCCGGGGAAACTGAAAAATTACCTGGTTGAGAAGATGCGCACGCTGGGTACGGCGGCCTGTCCTCCGTATCATATTGCGTTCGTTATTGGTGGAACTTCTGCAGAAACGAACCTTAAAACGGTGAAACTGGCTTCCGCGAAATACTATGATGAACTGCCAACGGAAGGGAATGAGCACGGTCAGGCGTTCCGCGATGTGGAACTGGAAAAAGAATTGCTGATCGAAGCGCAAAATCTTGGTCTGGGTGCGCAGTTTGGTGGTAAATACTTCGCTCACGACATCCGCGTGATTCGCCTGCCACGTCACGGCGCATCCTGCCCGGTCGGTATGGGCGTCTCCTGCTCTGCTGACCGTAATATCAAAGCGAAGATCAACCGTCAGGGGATCTGGATCGAAAAACTGGAACATAATCCAGGCAAATATATCCCGGAAGAGCTGCGCAAAGCGGGAGAAGGCGAAGCGGTGCGCGTTGACCTTAACCGTCCGATGAAAGAGATCCTCGCACAGTTGTCGCAGTATCCCGTTTCTACACGCTTATCGCTTAACGGCACGATTATCGTCGGTCGTGATATTGCTCACGCCAAACTGAAAGAGCGGATGGATAACGGTGAAGGGCTGCCGCAGTACATCAAAGATCATCCGATTTACTACGCGGGTCCGGCCAAAACGCCGGAAGGTTATGCCTCCGGTTCTCTTGGCCCAACGACCGCCGGACGGATGGATTCTTATGTCGATCAACTGCAAGCGCAGGGCGGAAGTATGATCATGCTGGCGAAAGGCAACCGCAGCCAGCAGGTGACGGATGCCTGTAAAAAACACGGCGGCTTCTACCTTGGCAGTATCGGTGGTCCGGCCGCTGTATTGGCGCAGGGAAGTATTAAGAGCCTGGAATGTGTTGAATATCCGGAACTGGGAATGGAAGCCATCTGGAAAATTGAAGTGGAAGATTTCCCGGCGTTTATCCTTGTGGATGATAAAGGAAATGACTTCTTCCAGCAGATACAACTCACACAATGCACCCGCTGTGTGAAATAA", 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"UniProtKB/Swiss-Prot:P00946" + ], + [ + "gene_synonym", + "EcoGene:EG10566" + ], + [ + "gene_synonym", + "GI:49176125" + ], + [ + "gene_synonym", + "JW1605" + ], + [ + "gene_synonym", + "GeneID:944840" + ], + [ + "gene_synonym", + "b1613" + ], + [ + "gene_synonym", + "pmi" + ], + [ + "gene_synonym", + "manA" + ], + [ + "gene_synonym", + "NP_416130.3" + ], + [ + "gene_synonym", + "ASAP:ABE-0005398" + ], + [ + "gene_synonym", + "ECK1608" + ] + ], + "dna_sequence": "ATGCAAAAACTCATTAACTCAGTGCAAAACTATGCCTGGGGCAGCAAAACGGCGTTGACTGAACTTTATGGTATGGAAAATCCGTCCAGCCAGCCGATGGCCGAGCTGTGGATGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACTGCGTGATGTGATTGAGAGTGATAAATCGACTCTGCTCGGAGAGGCCGTTGCCAAACGCTTTGGCGAACTGCCTTTCCTGTTCAAAGTATTATGCGCAGCACAGCCACTCTCCATTCAGGTTCATCCAAACAAACACAATTCTGAAATCGGTTTTGCCAAAGAAAATGCCGCAGGTATCCCGATGGATGCCGCCGAGCGTAACTATAAAGATCCTAACCACAAGCCGGAGCTGGTTTTTGCGCTGACGCCTTTCCTTGCGATGAACGCGTTTCGTGAATTTTCCGAGATTGTCTCCCTACTCCAGCCGGTCGCAGGTGCACATCCGGCGATTGCTCACTTTTTACAACAGCCTGATGCCGAACGTTTAAGCGAACTGTTCGCCAGCCTGTTGAATATGCAGGGTGAAGAAAAATCCCGCGCGCTGGCGATTTTAAAATCGGCCCTCGATAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTCGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGCCAAACCGGCTAACCAGTTGTTGACCCAGCCGGTGAAACAAGGTGCAGAACTGGACTTCCCGATTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGCCAGCAGAGTGCCGCCATTTTGTTCTGCGTCGAAGGCGATGCAACGTTGTGGAAAGGTTCTCAGCAGTTACAGCTTAAACCGGGTGAATCAGCGTTTATTGCCGCCAACGAATCACCGGTGACTGTCAAAGGCCACGGCCGTTTAGCGCGTGTTTACAACAAGCTGTAA", 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], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77804" + ], + [ + "gene_synonym", + "GI:16129572" + ], + [ + "gene_synonym", + "EcoGene:EG12457" + ], + [ + "gene_synonym", + "ydgA" + ], + [ + "gene_synonym", + "ECK1609" + ] + ], + "dna_sequence": 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+ "dna_sequence_length": 1509, + "functions": [ + "DUF945 family protein" + ], + "id": "CDS_1603", + "location": [ + [ + "NC_000913", + 1689852, + "+", + 1509 + ] + ], + "md5": "a53996bcd7bdba72d4eaf77d63897ec0", + "parent_gene": "", + "protein_md5": "afca01a8a5abfff6100aea5004d46e3f", + "protein_translation": "MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLKPLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLASFGERVGNQKLSLEKMTISVEGKELALLEGMEISGKSDLVNDGKTINSQLDYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQALLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVKSLDAKLTIPVDMATEFMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYANGQITLNGQKMSLEDFVGMFAMPALNVPAVPAIPQQ", + "protein_translation_length": 502, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005405" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47706" + ], + [ + "gene_synonym", + "b1615" + ], + [ + "gene_synonym", + "JW1607" + ], + [ + "gene_synonym", + "EcoGene:EG12668" + ], + [ + "gene_synonym", + "NP_416132.2" + ], + [ + "gene_synonym", + "GI:90111306" + ], + [ + "gene_synonym", + "ECK1610" + ], + [ + "gene_synonym", + "uidC" + ], + [ + "gene_synonym", + "GeneID:944820" + ], + [ + "gene_synonym", + "gusC" + ] + ], + "dna_sequence": "ATGAGAAAAATAGTGGCCATGGCCGTTATTTGCCTGACGGCTGCCTCTGGCCTTACCTCTGCTTATGCGGCGCAACTGGCTGACGATGAAGCGGGACTACGCATCAGACTGAAAAACGAATTGCGCAGGGCGGATAAGCCCAGTGCTGGCGCGGGAAGAGATATTTACGCATGGGTACAGGGAGGATTGCTCGATTTCAATAGTGGTTATTATTCCAATATTATTGGCGTTGAAGGCGGGGCGTATTATGTTTATAAATTAGGTGCTCGTGCTGATATGAGTACCCGGTGGTATCTTGATGGTGATAAAAGTTTTGGCTTTGCCCTGGGGGCAGTAAAAATAAAACCCAGTGAAAATAGCCTGCTTAAATTAGGTCGCTTCGGGACGGATTATAGTTATGGTAGCTTACCTTATCGTATTCCGTTAATGGCTGGCAGTTCGCAACGTACATTACCGACAGTTTCTGAAGGAGCATTAGGTTATTGGGCTTTAACACCAAATATTGATCTGTGGGGAATGTGGCGTTCACGAGTATTTTTATGGACTGATTCAACAACCGGTATTCGTGATGAAGGGGTGTATAACAGCCAGACGGGAAAATACGATAAACATCGCGCACGTTCTTTTTTAGCCGCCAGTTGGCATGATGATACCAGTCGCTATTCTCTGGGGGCATCGGTACAGAAAGATGTTTCCAATCAGATACAAAGTATTCTCGAGAAAAGCATACCGCTCGACCCGAATTATACGTTGAAAGGGGAGTTGCTCGGCTTTTACGCGCAGCTCGAAGGTTTAAGTCGTAATACCAGCCAGCCCAATGAAACGGCGTTGGTTAGTGGACAATTGACCTGGAATGCGCCGTGGGGAAGTGTATTTGGCAGTGGTGGTTATTTGCGCCATGCAATGAATGGTGCCGTGGTGGATACCGACATTGGCTATCCCTTTTCATTAAGTCTTGATCGTAACCGTGAAGGAATGCAGTCCTGGCAATTGGGCGTCAACTATCGTTTAACGCCGCAATTTACGCTGACATTTGCACCGATTGTGACTCGCGGCTATGAATCCAGTAAACGAGATGTGCGGATTGAAGGCACGGGTATCTTAGGTGGTATGAACTATCGGGTCAGCGAAGGGCCGTTACAAGGGATGAATTTCTTTCTTGCTGCCGATAAAGGGCGGGAAAAGCGCGATGGCAGTACGCTGGGCGATCGCCTGAATTACTGGGATGTGAAAATGAGTATTCAGTATGACTTTATGCTGAAGTAA", + "dna_sequence_length": 1266, + "functions": [ + "putative outer membrane porin for beta-glucuronides porin protein" + ], + "id": "CDS_1604", + "location": [ + [ + "NC_000913", + 1692851, + "-", + 1266 + ] + ], + "md5": "31b5a9c5a588fe1e65aea70083a3269e", + "parent_gene": "", + "protein_md5": "dc8b165e7badb22c0cd706d28f26db24", + "protein_translation": "MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAGAGRDIYAWVQGGLLDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGDKSFGFALGAVKIKPSENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALGYWALTPNIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILEKSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQLTWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDVRIEGTGILGGMNYRVSEGPLQGMNFFLAADKGREKRDGSTLGDRLNYWDVKMSIQYDFMLK", + "protein_translation_length": 421, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005407" + ], + [ + "gene_synonym", + "JW1608" + ], + [ + "gene_synonym", + "uidP" + ], + [ + "gene_synonym", + "b1616" + ], + [ + "gene_synonym", + "GeneID:947484" + ], + [ + "gene_synonym", + "ECK1611" + ], + [ + "gene_synonym", + "uidB" + ], + [ + "gene_synonym", + "NP_416133.1" + ], + [ + "gene_synonym", + "GI:16129574" + ], + [ + "gene_synonym", + "EcoGene:EG11658" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE44" + ], + [ + "gene_synonym", + "gusB" + ] + ], + "dna_sequence": "ATGAATCAACAACTCTCCTGGCGCACCATCGTCGGCTACAGCCTCGGTGACGTCGCCAATAACTTCGCCTTCGCAATGGGGGCGCTCTTCCTGTTGAGTTACTACACCGACGTCGCTGGCGTCGGTGCCGCTGCGGCGGGCACCATGCTGTTACTGGTGCGGGTATTCGATGCCTTCGCCGACGTCTTTGCCGGACGAGTGGTGGACAGTGTGAATACCCGCTGGGGAAAATTCCGCCCGTTTTTACTCTTCGGTACTGCGCCGTTAATGATCTTCAGCGTGCTGGTATTCTGGGTGCTGACCGACTGGAGCCATGGTAGCAAAGTGGTGTATGCATATTTGACCTACATGGGCCTCGGGCTTTGCTACAGCCTGGTGAATATTCCTTATGGTTCACTTGCTACCGCGATGACCCAACAACCACAATCCCGCGCCCGTCTGGGCGCGGCTCGTGGGATTGCCGCTTCATTGACCTTTGTCTGCCTGGCATTTCTGATAGGACCGAGCATTAAGAACTCCAGCCCGGAAGAGATGGTGTCGGTATACCATTTCTGGACAATTGTGCTGGCGATTGCCGGAATGGTGCTTTACTTCATCTGCTTCAAATCGACGCGTGAGAATGTGGTACGTATCGTTGCGCAGCCGTCATTGAATATCAGTCTGCAAACCCTGAAACGGAATCGCCCGCTGTTTATGTTGTGCATCGGTGCGCTGTGTGTGCTGATTTCGACCTTTGCGGTCAGCGCCTCGTCGTTGTTCTACGTGCGCTATGTGTTAAATGATACCGGGCTGTTCACTGTGCTGGTACTGGTGCAAAACCTGGTTGGTACTGTGGCATCGGCACCGCTGGTGCCGGGGATGGTCGCGAGGATCGGTAAAAAGAATACCTTCCTGATTGGCGCTTTGCTGGGAACCTGCGGTTATCTGCTGTTCTTCTGGGTTTCCGTCTGGTCACTGCCGGTGGCGTTGGTTGCGTTGGCCATCGCTTCAATTGGTCAGGGCGTTACCATGACCGTGATGTGGGCGCTGGAAGCTGATACCGTAGAATACGGTGAATACCTGACCGGCGTGCGAATTGAAGGGCTCACCTATTCACTATTCTCATTTACCCGTAAATGCGGTCAGGCAATCGGAGGTTCAATTCCTGCCTTTATTTTGGGGTTAAGCGGATATATCGCCAATCAGGTGCAAACGCCGGAAGTTATTATGGGCATCCGCACATCAATTGCCTTAGTACCTTGCGGATTTATGCTACTGGCATTCGTTATTATCTGGTTTTATCCGCTCACGGATAAAAAATTCAAAGAAATCGTGGTTGAAATTGATAATCGTAAAAAAGTGCAGCAGCAATTAATCAGCGATATCACTAATTAA", + "dna_sequence_length": 1374, + "functions": [ + "glucuronide transporter" + ], + "id": "CDS_1605", + "location": [ + [ + "NC_000913", + 1694263, + "-", + 1374 + ] + ], + "md5": "0777bf53df6ff8c46bdc4ef10472e0e9", + "parent_gene": "", + "protein_md5": "7582ee621638d65139cf1e0ea57b5e5a", + "protein_translation": "MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVLTDWSHGSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLNISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDNRKKVQQQLISDITN", + "protein_translation_length": 457, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005410" + ], + [ + "gene_synonym", + "GeneID:946149" + ], + [ + "gene_synonym", + "NP_416134.1" + ], + [ + "gene_synonym", + "JW1609" + ], + [ + "gene_synonym", + "b1617" + ], + [ + "gene_synonym", + "GI:16129575" + ], + [ + "gene_synonym", + "ECK1612" + ], + [ + "gene_synonym", + "gurA" + ], + [ + "gene_synonym", + "uidA" + ], + [ + "gene_synonym", + "EcoGene:EG11055" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05804" + ], + [ + "gene_synonym", + "gusA" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "b1621" + ], + [ + "gene_synonym", + "EcoGene:EG10563" + ], + [ + "gene_synonym", + "GI:16129579" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19642" + ] + ], + "dna_sequence": 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"MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL", + "protein_translation_length": 193, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "rsxB" + ], + [ + "gene_synonym", + "JW1620" + ], + [ + "gene_synonym", + "GeneID:946146" + ], + [ + "gene_synonym", + "rnfB" + ], + [ + "gene_synonym", + "EcoGene:EG13934" + ], + [ + "gene_synonym", + "ECK1624" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77223" + ], + [ + "gene_synonym", + "NP_416145.1" + ], + [ + "gene_synonym", + "ydgM" + ], + [ + "gene_synonym", + "GI:16129586" + ], + [ + "gene_synonym", + "ASAP:ABE-0005452" + ], + [ + "gene_synonym", + "b1628" + ] + ], + "dna_sequence": 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"pyridoxine 5'-phosphate oxidase" + ], + "id": "CDS_1628", + "location": [ + [ + "NC_000913", + 1718007, + "-", + 657 + ] + ], + "md5": "953d7cd8ba4ce9f1605fc0fddc329a34", + "parent_gene": "", + "protein_md5": "703f9b9778717f8100d9df88d0cc741a", + "protein_translation": "MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACEAKLADPTAMVVATVDEHGQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLLFPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP", + "protein_translation_length": 218, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b1639" + ], + [ + "gene_synonym", + "EcoGene:EG11488" + ], + [ + "gene_synonym", + "GeneID:946811" + ], + [ + "gene_synonym", + "ydhA" + ], + [ + "gene_synonym", + "ASAP:ABE-0005485" + ], + [ + "gene_synonym", + "ECK1635" + ], + [ + "gene_synonym", + "NP_416156.4" + ], + [ + "gene_synonym", + "JW1631" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28224" + ], + [ + "gene_synonym", + "GI:90111309" 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"d10291ec91a7668a07ebae273da5f232", + "protein_translation": "MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW", + "protein_translation_length": 78, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ydhJ" + ], + [ + "gene_synonym", + "EcoGene:EG13944" + ], + [ + "gene_synonym", + "NP_416161.4" + ], + [ + "gene_synonym", + "ECK1640" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76185" + ], + [ + "gene_synonym", + "JW1636" + ], + [ + "gene_synonym", + "b1644" + ], + [ + "gene_synonym", + "GI:90111311" + ], + [ + "gene_synonym", + "GeneID:946499" + ], + [ + "gene_synonym", + "ASAP:ABE-0005501" + ] + ], + "dna_sequence": 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"ATGGGTAAGATGAACCATCAGGATGAATTGCCGTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGCGGCAATGGTTGCAGGGGATGCGTCACCCCGTTGATACGGTAACCGAACCAGAACCTGCTGAAATCCTGGCTGAGTTCATTCGCCAGCATTCTGCGGCTGGGCAGCTGGTGGCGCGCGCCGTGTTTCTCTCGCCACCCTATTTGGTTGCAGAAGAGGAACTGTCAGTTTTGCTGGAAAGCATTAAGCAGAACGGAGACTACGCGGATATCGCTTGTTTGACGGGAAGCAAGGATGATTACTATTACTCAACGCAGGCCATGAGTGAAAACTACGCGGCGATGTCTTTGCAAGTTGTGGAGCAGGACATTTGTCGCGCCATTGCACACGCCGTTCGTTTTGAGTGCCAGACGTATCCTCGTCCTTACAAAGTCGCCATGCTGATGCAAGCGCCATATTACTTCCAGGAAGCGCAGATTGAAGCCGCGATCGCCGCGATGGATGTTGCACCTGAATATGCCGATATACGGCAGGTGGAGTCATCGACGGCGGTGTTGTACTTGTTTAGCGAGCGATTTATGACCTATGGCAAGGCTTATGGCTTATGCGAATGGTTCGAGGTAGAGCAGTTTCAGAACCCCTGA", + "dna_sequence_length": 648, + "functions": [ + "FNR, Nar, NarP-regulated protein", + "putative subunit of YdhYVWXUT oxidoreductase complex" + ], + "id": "CDS_1661", + "location": [ + [ + "NC_000913", + 1751724, + "-", + 648 + ] + ], + "md5": "29bcd51d227a0cfc063382f40105b9b4", + "parent_gene": "", + "protein_md5": 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"dna_sequence_length": 189, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1674", + "location": [ + [ + "NC_000913", + 1765122, + "-", + 189 + ] + ], + "md5": "1e315fcf6d145b63c861dd049c283139", + "parent_gene": "", + "protein_md5": "37bdf2d308438ce9698e92c189bf8cb3", + "protein_translation": "MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTLSSAELKEEIYFAWRLGVH", + "protein_translation_length": 62, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77781" + ], + [ + "gene_synonym", + "ydiI" + ], + [ + "gene_synonym", + "GI:16129642" + ], + [ + "gene_synonym", + "ASAP:ABE-0005628" + ], + [ + "gene_synonym", + "ECK1683" + ], + [ + "gene_synonym", + "b1686" + ], + [ + "gene_synonym", + "NP_416201.1" + ], + [ + "gene_synonym", + "EcoGene:EG13968" + ], + [ + "gene_synonym", + "menI" + ], + [ + "gene_synonym", + "GeneID:946190" + ], + [ + "gene_synonym", + "JW1676" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:90111316" + ], + [ + "gene_synonym", + "JW1679" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76196" + ], + [ + "gene_synonym", + "EcoGene:EG13971" + ], + [ + "gene_synonym", + "b1689" + ] + ], + "dna_sequence": "ATGAACGCTTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGTGAAAGCTGGCGTCAGTGGGAAAATGGCAAGTGTGCCATTCCTGATCGTGTAGTCGAGCAACTGTTGGCTATGCGTCAGCAAAGAAAAAAACATCTTCATGCCATCATAGAGAAAATAAATAACCGCATCGGCAACAACACCATGCGTTTTTTCCCCGACTTAACCGCATTTCAACGAGTCTACCCTGATGGCAATTTTATTGACTGGAAGATCTATCAATCGGTAGCTGCTGAATTATATGCACACGATCTGGAGCGGCTTTGTTAA", + "dna_sequence_length": 357, + "functions": [ + "putative HTH domain DNA-binding protein" + ], + "id": "CDS_1678", + "location": [ + [ + "NC_000913", + 1770615, + "+", + 357 + ] + ], + "md5": "179e83f3ada194f0353256b943abdde6", + "parent_gene": "", + "protein_md5": "6b278f8cbf949d55f7766a6113ae157a", + "protein_translation": "MNAYELQALRHIFAMTIDECATWIAQTGDSESWRQWENGKCAIPDRVVEQLLAMRQQRKKHLHAIIEKINNRIGNNTMRFFPDLTAFQRVYPDGNFIDWKIYQSVAAELYAHDLERLC", + "protein_translation_length": 118, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK1688" + ], + [ + "gene_synonym", + "GI:16129646" + ], + [ + "gene_synonym", + "b1690" + ], + [ + "gene_synonym", + "ASAP:ABE-0005645" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76197" + ], + [ + "gene_synonym", + "NP_416205.1" + ], + [ + "gene_synonym", + "JW1680" + ], + [ + "gene_synonym", + "GeneID:946196" + ], + [ + "gene_synonym", + "EcoGene:EG13972" + ], + [ + "gene_synonym", + "ydiM" + ] + ], + "dna_sequence": 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"location": [ + [ + "NC_000913", + 1773789, + "+", + 867 + ] + ], + "md5": "a276dd09d71a43af48848cfb0fa2adf7", + "parent_gene": "", + "protein_md5": "7aefe9d44cfe2be509938a25c6cc7fee", + "protein_translation": "MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVMGFGA", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05194" + ], + [ + "gene_synonym", + "ASAP:ABE-0005653" + ], + [ + "gene_synonym", + "EcoGene:EG10076" + ], + [ + "gene_synonym", + "GeneID:946210" + ], + [ + "gene_synonym", + "GI:16129649" + ], + [ + "gene_synonym", + "ECK1691" + ], + [ + "gene_synonym", + "NP_416208.1" + ], + [ + "gene_synonym", + "aroD" + ], + [ + "gene_synonym", + "JW1683" + ], + [ + "gene_synonym", + "b1693" + ] + ], + "dna_sequence": "ATGAAAACCGTAACTGTAAAAGATCTCGTCATTGGTACGGGCGCACCTAAAATCATCGTCTCGCTGATGGCGAAAGATATCGCCAGCGTGAAATCCGAAGCTCTCGCCTATCGTGAAGCGGACTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGTTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTATTTACCGGTGATGATCAGGTTAAAGAAACCGTCGCCTACGCCCACGCGCATGATGTGAAAGTAGTCATGTCCAACCATGACTTCCATAAAACGCCGGAAGCCGAAGAAATCATTGCCCGTCTGCGCAAAATGCAATCCTTCGACGCCGATATTCCTAAGATTGCGCTGATGCCGCAAAGTACCAGCGATGTGCTGACGTTGCTTGCCGCGACCCTGGAGATGCAGGAGCAGTATGCCGATCGTCCAATTATCACGATGTCGATGGCAAAAACTGGCGTAATTTCTCGTCTGGCTGGTGAAGTATTTGGCTCGGCGGCAACTTTTGGTGCGGTAAAAAAAGCGTCTGCGCCAGGGCAAATCTCGGTAAATGATTTGCGCACGGTATTAACTATTTTACACCAGGCATAA", + "dna_sequence_length": 759, + "functions": [ + "3-dehydroquinate dehydratase" + ], + "id": "CDS_1682", + "location": [ + [ + "NC_000913", + 1774686, + "+", + 759 + ] + ], + "md5": "84571b8374eef90b8d96472692920f2f", + "parent_gene": "", + "protein_md5": "2430db0e67ee8cbbeb6c0d725090a453", + "protein_translation": "MKTVTVKDLVIGTGAPKIIVSLMAKDIASVKSEALAYREADFDILEWRVDHYADLSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTGDDQVKETVAYAHAHDVKVVMSNHDFHKTPEAEEIIARLRKMQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEVFGSAATFGAVKKASAPGQISVNDLRTVLTILHQA", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005656" + ], + [ + "gene_synonym", + "GI:16129650" + ], + [ + "gene_synonym", + "GeneID:946211" + ], + [ + "gene_synonym", + "ECK1692" + ], + [ + "gene_synonym", + "NP_416209.1" + ], + [ + "gene_synonym", + "EcoGene:EG12432" + ], + [ + "gene_synonym", + "ydiF" + ], + [ + "gene_synonym", + "b1694" + ], + [ + "gene_synonym", + "JW1684" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37766" + ] + ], + "dna_sequence": 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transcriptional regulator" + ], + "id": "CDS_1685", + "location": [ + [ + "NC_000913", + 1779301, + "-", + 912 + ] + ], + "md5": "ffdf30cd111d8064d665de3e49e3fbab", + "parent_gene": "", + "protein_md5": "eeb10359211ecbd77c0faa15f78e866c", + "protein_translation": "MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVSLVG", + "protein_translation_length": 303, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16129653" + ], + [ + "gene_synonym", + "ASAP:ABE-0005666" + ], + [ + "gene_synonym", + "GeneID:946482" + ], + [ + "gene_synonym", + "JW5276" + ], + [ + "gene_synonym", + "ECK1695" + ], + [ + "gene_synonym", + "NP_416212.1" + ], + [ + "gene_synonym", + "b1697" + ], + [ + "gene_synonym", + "ydiQ" + ], + [ + "gene_synonym", + "EcoGene:EG13976" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76201" + ] + ], + "dna_sequence": "ATGAAAATAATAACCTGCTTTAAGCTGGTGCCTGAAGAACAGGACATTGTTGTCACTCCAGAATACACCCTGAATTTCGACAATGCCGACGCCAAAATCAGCCAGTTCGATCTCAATGCCATTGAAGCTGCAAGCCAGCTCGCAACAGATGACGATGAGATAGCCGCGCTGACCGTTGGCGGCTCATTGTTGCAGAACTCGAAAGTGCGCAAAGACGTGCTATCCCGCGGGCCGCACAGCCTGTATTTGGTGCAGGATGCGCAACTTGAACATGCACTGCCTCTCGATACCGCAAAAGCGCTGGCGGCAGCAATTGAAAAGATCGGCTTCGATTTACTGATCTTTGGTGAAGGTTCCGGCGACCTTTATGCCCAGCAGGTTGGCTTGCTGGTCGGAGAAATTCTGCAACTTCCGGTGATTAATGCAGTGAGTGCTATTCAGCGTCAGGGCAATACACTGGTGATTGAACGCACGCTTGAAGATGATGTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGA", + "dna_sequence_length": 765, + "functions": [ + "putative electron transfer flavoprotein subunit" + ], + "id": "CDS_1686", + "location": [ + [ + "NC_000913", + 1779617, + "+", + 765 + ] + ], + "md5": "b0bd876e0a350a1348abfcae1c1816a1", + "parent_gene": "", + "protein_md5": "76d7ec9a071eed255b8864d1b7ede0c3", + "protein_translation": "MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAASQLATDDDEIAALTVGGSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALAAAIEKIGFDLLIFGEGSGDLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLEDDVEVIELSVPAVLCVTSDINVPRIPSMKAILGAGKKPVNQWQASDIDWSQSAPLAELVGIRVPPQTERKHIIIDNDSPEAIAELAEHLKKALN", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:945688" + ], + [ + "gene_synonym", + "GI:16129654" + ], + [ + "gene_synonym", + "ASAP:ABE-0005668" + ], + [ + "gene_synonym", + "ECK1696" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77378" + ], + [ + "gene_synonym", + "NP_416213.1" + ], + [ + "gene_synonym", + "EcoGene:EG13977" + ], + [ + "gene_synonym", + "ydiR" + ], + [ + "gene_synonym", + "b1698" + ], + [ + "gene_synonym", + "JW1688" + ] + ], + "dna_sequence": "ATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGTCTTTATGTTCTTGCGCAAAACGACGCGCTGCAACGCACTGAAAATTACGCCGAAAGCATTGCTGCCCTGCTGAAAGATAAACACCCCGCTATGTTGCTGTTGGCCGCGACGAAACGTGGTAAAGCGCTGGCAGCACGGTTAAGTGTGCAACTGAATGCGGCGCTGGTGAACGATGCCACGGCGGTGGATATTGTCGATGGTCACATTTGCGCCGAACACCGGATGTATGGCGGGTTAGCGTTCGCTCAGGAAAAGATCAACAGCCCGCTGGCGATCATTACCCTTGCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACTGGATGGAGCGTGAACGTTATATCGGTGTCTCCGGCGTGTTGCTGAAATCCGATCTCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCGACTACGGTCTGGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGTTGAGCCGCTAA", + "dna_sequence_length": 939, + "functions": [ + "putative electron transfer flavoprotein, FAD-binding subunit" + ], + "id": "CDS_1687", + "location": [ + [ + "NC_000913", + 1780401, + "+", + 939 + ] + ], + "md5": "51e7705d896d4b6bdd2959b9547895a4", + "parent_gene": "", + "protein_md5": "c2a577597e15da77d3527807221f5bf5", + "protein_translation": "MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTDQAQAVMPYGPKCLYVLAQNDALQRTENYAESIAALLKDKHPAMLLLAATKRGKALAARLSVQLNAALVNDATAVDIVDGHICAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTSDTSHQCPTETVPYVAPRHEILCRERRAKAASSVDLSKAKRVVGVGRGLAAQDDLKMVHELAAVLNAEVGCSRPIAEGENWMERERYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNYADYGLVGDIYKVVPALISQLSR", + "protein_translation_length": 312, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005671" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77337" + ], + [ + "gene_synonym", + "GI:16129655" + ], + [ + "gene_synonym", + "NP_416214.1" + ], + [ + "gene_synonym", + "GeneID:946212" + ], + [ + "gene_synonym", + "ECK1697" + ], + [ + "gene_synonym", + "EcoGene:EG13978" + ], + [ + "gene_synonym", + "ydiS" + ], + [ + "gene_synonym", + "b1699" + ], + [ + "gene_synonym", + "JW1689" + ] + ], + "dna_sequence": "ATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGTTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGATGTAAAAACATGACCGGCGGGCGTCTTTATGCCCACACACTTGAAGCAATCATTCCAGGCTTTGCAGTATCAGCGCCGGTAGAACGCAAGGTCACACGCGAGAAAATCTCCTTCTTAACCGAAGAAAGCGCCGTTACCCTCGATTTTCACCGCGAGCAGCCAGATGTTCCGCAACACGCATCTTATACCGTATTGCGTAATCGTCTGGACCCGTGGTTGATGGAACAAGCCGAGCAGGCGGGCGCGCAGTTTATCCCAGGCGTTCGCGTCGACGCGCTGGTTCGTGAAGGAAACAAGGTCACTGGCGTGCAGGCTGGGGATGATATTCTCGAAGCGAATGTGGTGATTCTGGCTGATGGCGTTAACTCGATGCTTGGCCGCTCGCTGGGAATGGTTCCCGCTTCCGATCCGCATCATTACGCTGTTGGTGTTAAAGAGGTTATTGGCCTCACACCAGAACAGATCAACGATCGCTTTAATATTACGGGCGAGGAAGGTGCCGCCTGGCTGTTTGCCGGTTCCCCTTCTGACGGCCTGATGGGCGGGGGATTTCTCTATACCAACAAGGATTCCATATCCTTGGGGCTGGTTTGTGGATTGGGTGATATCGCCCATGCGCAAAAAAGCGTGCCGCAAATGCTGGAAGATTTTAAACAACACCCCGCCATTCGCCCGCTGATTAGCGGCGGCAAACTGCTTGAATATTCCGCGCATATGGTGCCGGAAGGCGGTCTGGCAATGGTGCCGCAACTGGTTAACGAGGGCGTGATGATCGTTGGTGACGCCGCAGGCTTCTGCCTGAATTTGGGTTTTACGGTCCGCGGCATGGATTTAGCCATTGCATCGGCTCAGGCTGCCGCCACAACGGTGATCGCCGCCAAAGAACGCGCGGATTTCTCCGCCAGCAGTCTGGCGCAATACAAACGTGAGCTGGAACAAAGCTGCGTCATGCGTGATATGCAGCATTTTCGCAAGATCCCGGCGCTGATGGAAAACCCGCGCCTGTTTAGCCAATACCCACGAATGGTAGCCGACATCATGAACGAGATGTTCACCATCGACGGCAAACCAAACCAGCCGGTACGAAAAATGATCATGGGACATGCGAAGAAAATTGGGCTGATCAACTTGCTGAAAGATGGCATTAAGGGAGCAACCGCGCTATGA", + "dna_sequence_length": 1290, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_1688", + "location": [ + [ + "NC_000913", + 1781395, + "+", + 1290 + ] + ], + "md5": "df670b9b83a40c35d57fe68b28fdd467", + "parent_gene": "", + "protein_md5": "46bf11d88c09549eeb465a498abb02b9", + "protein_translation": "MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNQPVRKMIMGHAKKIGLINLLKDGIKGATAL", + "protein_translation_length": 429, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK1698" + ], + [ + "gene_synonym", + "GeneID:946214" + ], + [ + "gene_synonym", + "ASAP:ABE-0005674" + ], + [ + "gene_synonym", + "GI:16129656" + ], + [ + "gene_synonym", + "b1700" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77714" + ], + [ + "gene_synonym", + "EcoGene:EG13979" + ], + [ + "gene_synonym", + "JW1690" + ], + [ + "gene_synonym", + "NP_416215.1" + ], + [ + "gene_synonym", + "ydiT" + ] + ], + "dna_sequence": "ATGAGCCAGAACGCTACGGTTAACGTCGACATCAAATTAGGCGTCAATAAATTCCATGTTGATGAGGGCCACCCGCATATCATTCTGGCGGAAAATCCCGATATCAATGAATTCCATAAATTAATGAAAGCCTGCCCTGCCGGACTTTATAAGCAGGATGACGCAGGAAACATTCATTTTGATTCCGCCGGTTGTCTGGAGTGCGGCACCTGTCGGGTGCTGTGCGGTAACACTATTCTCGAACAGTGGCAATATCCCGCAGGCACCTTCGGTATTGATTTTCGCTACGGCTAA", + "dna_sequence_length": 294, + "functions": [ + "putative 3Fe-4S ferredoxin-type protein" + ], + "id": "CDS_1689", + "location": [ + [ + "NC_000913", + 1782681, + "+", + 294 + ] + ], + "md5": "f5d538a0813e00b2c58c633e7cd15932", + "parent_gene": "", + "protein_md5": "41572006de550b3469e04933f37ec499", + "protein_translation": "MSQNATVNVDIKLGVNKFHVDEGHPHIILAENPDINEFHKLMKACPAGLYKQDDAGNIHFDSAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK1699" + ], + [ + "gene_synonym", + "GeneID:946213" + ], + [ + "gene_synonym", + "ASAP:ABE-0005676" + ], + [ + "gene_synonym", + "b1701" + ], + [ + "gene_synonym", + "ydiD" + ], + [ + "gene_synonym", + "EcoGene:EG12357" + ], + [ + "gene_synonym", + "JW5910" + ], + [ + "gene_synonym", + "NP_416216.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38135" + ], + [ + "gene_synonym", + "GI:145698273" + ], + [ + "gene_synonym", + "fadK" + ] + ], + "dna_sequence": "ATGAAAGTGACATTAACGTTTAACGAACAACGTCGTGCGGCGTATCGTCAGCAAGGGTTATGGGGCGATGCTTCGCTGGCCGATTACTGGCAGCAGACCGCTCGTGCGATGCCAGACAAAATTGCCGTGGTCGATAATCATGGTGCATCGTACACCTATAGCGCGCTCGATCACGCCGCGAGCTGTCTGGCAAACTGGATGTTAGCGAAGGGTATTGAATCAGGCGATCGCATCGCATTTCAACTGCCTGGCTGGTGTGAATTTACCGTTATCTATCTTGCCTGCCTGAAAATCGGTGCAGTTTCCGTGCCGCTGTTGCCTTCCTGGCGGGAAGCAGAACTGGTGTGGGTGCTCAATAAGTGTCAGGCAAAAATGTTCTTTGCACCGACGTTGTTTAAACAAACGCGTCCGGTAGATTTAATCCTGCCGCTGCAAAATCAGCTTCCACAACTACAACAAATTGTCGGCGTGGACAAACTGGCTCCCGCCACCTCTTCCCTCTCATTAAGTCAGATTATCGCCGACAATACCTCACTGACCACGGCGATAACGACCCACGGCGATGAATTAGCTGCGGTGCTGTTTACCTCCGGAACCGAGGGTCTGCCAAAGGGCGTGATGCTAACGCATAACAATATTCTCGCCAGTGAGCGGGCTTATTGCGCGCGACTGAATCTGACCTGGCAGGATGTCTTTATGATGCCTGCGCCACTTGGTCACGCAACGGGCTTTCTGCATGGCGTAACGGCACCATTCTTAATTGGCGCTCGCAGCGTGTTGTTAGATATTTTCACTCCTGATGCGTGTCTCGCGCTGCTTGAGCAGCAGCGTTGCACCTGTATGCTCGGCGCAACGCCGTTTGTCTATGATCTTTTGAATGTACTAGAGAAACAACCCGCGGACCTTTCAGCGCTGCGTTTCTTTCTTTGCGGCGGAACCACAATCCCCAAAAAAGTGGCGCGTGAATGCCAGCAGCGCGGCATTAAATTATTAAGTGTTTATGGTTCCACAGAAAGTTCGCCGCATGCGGTGGTGAATCTCGATGATCCTTTGTCGCGCTTTATGCACACCGATGGTTACGCTGCCGCAGGTGTAGAGATTAAAGTGGTCGATGACGCACGCAAGACCTTACCGCCAGGTTGCGAAGGTGAAGAAGCCTCGCGTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGATCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAATATTAGCAGCCGTGAAGTGGAAGATATTTTATTGCAGCATCCTAAAATTCACGATGCCTGTGTGGTTGCAATGTCCGATGAACGTTTAGGTGAACGATCATGCGCTTATGTCGTGCTGAAAGCGCCGCATCATTCATTATCGCTGGAAGAGGTAGTGGCTTTTTTTAGCCGTAAACGGGTCGCAAAATATAAATATCCTGAACATATCGTGGTAATCGAAAAACTACCGCGAACTACCTCAGGTAAAATACAAAAGTTTTTGTTAAGAAAAGATATTATGCGGCGTTTAACGCAGGATGTCTGTGAAGAGATTGAATAA", 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"EcoGene:EG10759" + ], + [ + "gene_synonym", + "b1702" + ], + [ + "gene_synonym", + "NP_416217.1" + ], + [ + "gene_synonym", + "ppsA" + ], + [ + "gene_synonym", + "GI:16129658" + ], + [ + "gene_synonym", + "pps" + ], + [ + "gene_synonym", + "ASAP:ABE-0005678" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23538" + ], + [ + "gene_synonym", + "GeneID:946209" + ], + [ + "gene_synonym", + "JW1692" + ], + [ + "gene_synonym", + "ECK1700" + ] + ], + "dna_sequence": 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"MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVSVPNGFATTADAFNQFLDQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQPELENAIREAYAQLSADDENASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAVKHVFASLFNDRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQVVFITSAWGLGEMVVQGAVNPDEFYVHKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHGKQVKIEDVPQEQRDIFSLTNEEVQELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQARPETVRSRGQVMERYTLHSQGKIIAEGRAIGHRIGAGPVKVIHDISEMNRIEPGDVLVTDMTDPDWEPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERMKDGENVTVSCAEGDTGYVYAELLEFSVKSSSVETMPDLPLKVMMNVGNPDRAFDFACLPNEGVGLARLEFIINRMIGVHPRALLEFDDQEPQLQNEIREMMKGFDSPREFYVGRLTEGIATLGAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDEENPMLGFRGAGRYVSDSFRDCFALECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIPSNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVSELFDERNDAVKALLSMAIRAAKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTVVQTWLSLAELKK", + "protein_translation_length": 792, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b1703" + ], + [ + "gene_synonym", + "GeneID:946207" + ], + [ + "gene_synonym", + "ydiA" + ], + [ + "gene_synonym", + "GI:16129659" + ], + [ + "gene_synonym", + "duf299" + ], + [ + "gene_synonym", + "ppsR" + ], + [ + "gene_synonym", + "EcoGene:EG11132" + ], + [ + "gene_synonym", + "JW1693" + ], + [ + "gene_synonym", + "ASAP:ABE-0005682" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8A4" + ], + [ + "gene_synonym", + "NP_416218.1" + ], + [ + "gene_synonym", + "ECK1701" + ] + ], + "dna_sequence": "ATGGATAATGCTGTTGATCGCCACGTTTTTTATATTTCTGATGGTACGGCAATAACTGCGGAGGTATTAGGACACGCAGTAATGTCACAATTTCCCGTCACTATCAGCAGCATCACGCTGCCGTTTGTCGAAAATGAGAGCCGTGCACGGGCAGTGAAGGATCAGATTGACGCAATTTATCACCAGACAGGCGTGCGCCCGCTGGTCTTCTACTCCATCGTGTTGCCGGAGATTCGCGCCATCATCTTGCAAAGTGAAGGCTTTTGCCAGGATATCGTTCAGGCGCTGGTTGCCCCGCTACAACAAGAGATGAAACTGGATCCAACGCCGATTGCTCATCGTACCCATGGCCTTAACCCTAATAATCTCAATAAATATGATGCGCGCATTGCGGCGATTGATTACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGCAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGACTATCGACCCGGAACGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTTAGTCGCCGAATGTACTAG", + "dna_sequence_length": 834, + "functions": [ + "PEP synthase kinase and PEP synthase pyrophosphorylase" + ], + "id": "CDS_1692", + "location": [ + [ + "NC_000913", + 1787445, + "+", + 834 + ] + ], + "md5": "2842c2b9af85aba08284ac44354d8d88", + "parent_gene": "", + "protein_md5": "06fae8bc6a882323282c58129bdf9b9e", + "protein_translation": "MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQEMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSRCGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIREERRENSRYASLRQCRMEVAEVEALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRMY", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b1704" + ], + [ + "gene_synonym", + "ASAP:ABE-0005686" + ], + [ + "gene_synonym", + "EcoGene:EG10080" + ], + [ + "gene_synonym", + "JW1694" + ], + [ + "gene_synonym", + "GeneID:946229" + ], + [ + "gene_synonym", + "ECK1702" + ], + [ + "gene_synonym", + "aroH" + ], + [ + "gene_synonym", + "GI:16129660" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00887" + ], + [ + "gene_synonym", + "NP_416219.1" + ] + ], + "dna_sequence": "ATGAACAGAACTGACGAACTCCGTACTGCGCGTATTGAGAGCCTGGTAACGCCCGCCGAACTCGCGCTACGGTATCCCGTAACGCCTGGCGTCGCCACCCATGTCACCGACTCCCGCCGCAGAATTGAAAAAATACTGAATGGTGAAGATAAGCGACTGTTGGTCATTATTGGCCCCTGCTCGATCCACGATCTCACCGCTGCAATGGAGTACGCCACCCGTCTGCAGTCGCTGCGCAACCAGTACCAGTCACGGCTGGAAATCGTAATGCGCACCTATTTTGAAAAACCACGAACTGTTGTCGGCTGGAAAGGACTAATCTCCGATCCAGATTTAAACGGCAGCTATCGGGTAAATCACGGTCTGGAGCTGGCGCGCAAATTACTTTTACAGGTAAATGAGCTGGGCGTCCCAACCGCGACCGAGTTCCTCGATATGGTGACCGGTCAGTTTATTGCTGATTTAATCAGTTGGGGCGCGATTGGCGCACGTACTACCGAAAGTCAGATCCACCGCGAAATGGCTTCGGCACTCTCCTGTCCGGTAGGTTTTAAAAATGGTACCGATGGCAATACGCGGATTGCTGTGGATGCTATCCGCGCAGCCCGCGCCAGCCATATGTTCCTCTCGCCAGACAAAAATGGTCAGATGACCATCTATCAGACCAGCGGCAACCCGTATGGCCACATTATTATGCGTGGCGGCAAAAAACCGAATTATCATGCCGATGATATCGCCGCAGCCTGCGATACGCTGCACGAGTTTGATTTACCTGAACATCTGGTGGTGGATTTCAGCCACGGTAACTGCCAGAAGCAGCACCGTCGCCAGTTAGAAGTTTGTGAGGATATTTGTCAGCAAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTTCTGA", 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"gene_synonym", + "ASAP:ABE-0005692" + ], + [ + "gene_synonym", + "EcoGene:EG12391" + ], + [ + "gene_synonym", + "ydiE" + ], + [ + "gene_synonym", + "JW1695" + ], + [ + "gene_synonym", + "GI:16129661" + ], + [ + "gene_synonym", + "ECK1703" + ] + ], + "dna_sequence": "ATGCGTTATACGGATAGCAGAAAACTCACGCCTGAAACGGATGCCAATCACAAGACCGCTTCCCCGCAGCCTATTCGGCGAATTTCCAGCCAGACACTGTTAGGTCCGGATGGCAAACTGATTATCGATCATGACGGGCAAGAATATCTGCTCCGTAAAACTCAGGCTGGCAAGCTGCTGTTGACCAAGTAG", + "dna_sequence_length": 192, + "functions": [ + "hemin uptake protein HemP homolog" + ], + "id": "CDS_1694", + "location": [ + [ + "NC_000913", + 1789613, + "+", + 192 + ] + ], + "md5": "d8e12559c6ee29ff7e7bb20863e73050", + "parent_gene": "", + "protein_md5": "2aa1c4c849cfdcc5e424b888b95747ca", + "protein_translation": "MRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK", + "protein_translation_length": 63, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b1706" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77649" + ], + [ + "gene_synonym", + "ASAP:ABE-0005694" + ], + [ + "gene_synonym", + "NP_416221.1" + ], + [ + "gene_synonym", + "GI:16129662" + ], + [ + "gene_synonym", + "JW1696" + ], + [ + "gene_synonym", + "EcoGene:EG13980" + ], + [ + "gene_synonym", + "GeneID:946219" + ], + [ + "gene_synonym", + "ECK1704" + ], + [ + "gene_synonym", + "ydiU" + ] + ], + "dna_sequence": "ATGACCCTGTCTTTTGTTACCCGCTGGCGCGATGAATTGCCAGAAACCTATACAGCACTTTCCCCTACGCCTTTAAATAATGCCCGGCTGATTTGGCATAATACCGAACTGGCTAACACGCTGAGTATTCCATCGTCGCTGTTTAAAAATGGCGCAGGTGTCTGGGGCGGCGAAGCCCTACTGCCTGGTATGTCACCACTGGCGCAGGTTTACAGTGGTCATCAGTTCGGCGTCTGGGCGGGCCAACTGGGTGATGGGCGCGGCATTTTACTCGGCGAACAACTGCTTGCTGATGGCACTACAATGGACTGGCATCTGAAAGGTGCTGGCCTGACGCCTTATTCGCGAATGGGTGATGGACGGGCGGTTTTACGTTCGACGATACGAGAAAGTCTCGCCAGTGAGGCGATGCATTATCTGGGCATTCCGACGACCCGCGCGTTAAGTATCGTCACCAGCGATTCGCCAGTGTATCGGGAAACGGCGGAGCCAGGCGCGATGCTGATGCGTGTGGCACCAAGTCATCTGCGCTTTGGTCATTTCGAACATTTTTACTACCGCCGCGAGTCGGAAAAGGTTCGTCAGTTAGCTGACTTTGCTATTCGTCATTACTGGTCACATCTTGCAGATGATGAGGACAAATACCGTCTCTGGTTTAGCGATGTTGTCGCACGTACCGCGTCGTTAATTGCCCAATGGCAGACGGTCGGCTTTGCTCATGGGGTGATGAATACCGACAACATGTCGCTGCTGGGGCTGACGCTTGATTACGGGCCGTTTGGTTTTCTTGATGATTACGAACCCGGTTTTATTTGTAATCACTCGGATCATCAAGGGCGTTACAGCTTTGATAATCAACCTGCCGTCGCGTTGTGGAATTTACAGCGTCTGGCGCAGACATTGTCGCCATTTGTTGCCGTAGATGCCCTGAATGAGGCCCTGGACAGCTATCAGCAGGTTTTGTTGACGCATTATGGAGAACGGATGCGGCAGAAACTGGGCTTCATGACGGAGCAAAAAGAGGATAACGCGCTACTGAATGAATTATTCAGTCTGATGGCGCGAGAGCGCAGCGATTATACCCGCACATTCCGCATGCTGAGTCTGACCGAGCAGCACAGCGCGGCGTCACCGCTACGTGATGAGTTTATTGATCGTGCGGCATTTGATGACTGGTTTGCCCGTTATCGGGGGCGTTTGCAACAAGACGAGGTTAGCGATAGTGAGCGTCAGCAACTGATGCAAAGCGTTAACCCCGCTCTGGTATTGCGCAACTGGTTGGCGCAACGGGCGATTGAAGCGGCAGAAAAGGGTGATATGACGGAATTGCACCGCCTGCATGAGGCGTTGCGAAATCCTTTCAGCGACAGAGATGATGACTATGTCAGTCGTCCACCTGACTGGGGTAAACGGCTGGAAGTCAGCTGCTCGAGTTAA", 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"6-phosphofructokinase II" + ], + "id": "CDS_1712", + "location": [ + [ + "NC_000913", + 1806370, + "+", + 930 + ] + ], + "md5": "8f8649b47d25f7a3a36f25672e4cb4c7", + "parent_gene": "", + "protein_md5": "8bfa12521f9bb04393d8f5639d9cf074", + "protein_translation": "MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGEQYRFVMPGAALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLCSHDDTQKIYAYLSR", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_416238.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0005751" + ], + [ + "gene_synonym", + "GeneID:946232" + ], + [ + "gene_synonym", + "ECK1722" + ], + [ + "gene_synonym", + "JW1713" + ], + [ + "gene_synonym", + "GI:16129678" + ], + [ + "gene_synonym", + "EcoGene:EG13985" + ], + [ + "gene_synonym", + "ydiZ" + ], + [ + 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"EcoGene:EG12198" + ], + [ + "gene_synonym", + "JW1722" + ], + [ + "gene_synonym", + "GeneID:946231" + ], + [ + "gene_synonym", + "ydjC" + ], + [ + "gene_synonym", + "GI:16129687" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37794" + ], + [ + "gene_synonym", + "ECK1731" + ], + [ + "gene_synonym", + "b1733" + ], + [ + "gene_synonym", + "celG" + ] + ], + "dna_sequence": 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[ + [ + "NC_000913", + 1819447, + "-", + 843 + ] + ], + "md5": "278ef93eed0bdb351ba6d38e5a9190fb", + "parent_gene": "", + "protein_md5": "d8d0320c909ab4012575b41505f8932d", + "protein_translation": "MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ", + "protein_translation_length": 280, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005792" + ], + [ + "gene_synonym", + "chbA" + ], + [ + "gene_synonym", + "JW1725" + ], + [ + "gene_synonym", + "EcoGene:EG10142" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69791" + ], + [ + "gene_synonym", + "GeneID:946244" + ], + [ + "gene_synonym", + "GI:16129690" + ], + [ + "gene_synonym", + "celC" + ], + [ + "gene_synonym", + "b1736" + ], + [ + "gene_synonym", + "ECK1734" + ], + [ + "gene_synonym", + "NP_416250.1" + ] + ], + "dna_sequence": "ATGATGGATCTCGATAACATTCCCGATACGCAAACGGAAGCTGAAGAGCTGGAAGAAGTGGTGATGGGGCTGATCATCAACTCCGGACAAGCGCGCAGCCTGGCGTATGCGGCACTGAAACAGGCGAAGCAGGGCGATTTTGCCGCAGCAAAAGCCATGATGGATCAGTCACGGATGGCATTGAATGAAGCGCATCTGGTACAGACGAAACTGATTGAAGGCGATGCGGGCGAAGGTAAGATGAAAGTGAGTCTGGTGCTGGTCCACGCTCAGGATCATTTAATGACGTCCATGCTTGCGCGTGAACTGATTACTGAATTAATTGAGCTTCATGAAAAACTGAAGGCATAA", + "dna_sequence_length": 351, + "functions": [ + "N,N'-diacetylchitobiose-specific enzyme IIA component of PTS" + ], + "id": "CDS_1725", + "location": [ + [ + "NC_000913", + 1819805, + "-", + 351 + ] + ], + "md5": "5ba14c77e02b3aac21ab3bb5d3cb293c", + "parent_gene": "", + "protein_md5": "a0de2a6a74b4128dddc5bc89c77b6413", + "protein_translation": "MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAKQGDFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGKMKVSLVLVHAQDHLMTSMLARELITELIELHEKLKA", + "protein_translation_length": 116, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + 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"MLCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLFSWMIGALAEQFSCTGELWLNEQRIDILPTAQRQIGILFQDALLFDQFSVGQNLLLALPATLKGNARRNAVNDALERSGLEGAFHQDPATLSGGQRARVALLRALLAQPKALLLDEPFSRLDVALRDNFRQWVFSEVRALAIPVVQVTHDLQDVPADSSVLDMAQWSENYNKLR", + "protein_translation_length": 217, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW5287" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P78067" + ], + [ + "gene_synonym", + "ECK1755" + ], + [ + "gene_synonym", + "GI:90111324" + ], + [ + "gene_synonym", + "NP_416271.4" + ], + [ + "gene_synonym", + "ynjE" + ], + [ + "gene_synonym", + "ASAP:ABE-0005848" + ], + [ + "gene_synonym", + "EcoGene:EG14007" + ], + [ + "gene_synonym", + "GeneID:946505" + ], + [ + "gene_synonym", + "b1757" + ] + ], + "dna_sequence": 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phosphatidyltransferase family inner membrane protein" + ], + "id": "CDS_1747", + "location": [ + [ + "NC_000913", + 1841403, + "-", + 621 + ] + ], + "md5": "eda514aaa066f5c24dc70eeb29420c99", + "parent_gene": "", + "protein_md5": "6e3abafda766d308c0f1db9ded7e5714", + "protein_translation": "MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFILAAPEQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ", + "protein_translation_length": 206, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005855" + ], + [ + "gene_synonym", + "ECK1757" + ], + [ + "gene_synonym", + "nudG" + ], + [ + "gene_synonym", + "orf135" + ], + [ + "gene_synonym", + "ynjG" + ], + [ + "gene_synonym", + "EcoGene:EG14009" + ], + [ + "gene_synonym", + "GeneID:946277" + ], + [ + "gene_synonym", + "JW1748" + ], + [ + "gene_synonym", + "b1759" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77788" + 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"DUF1496 family protein" + ], + "id": "CDS_1749", + "location": [ + [ + "NC_000913", + 1842135, + "-", + 273 + ] + ], + "md5": "6eb7ec0d9b18d8888386c2e6898bd862", + "parent_gene": "", + "protein_md5": "47b472a80816e3ee4e15e76332c1dc04", + "protein_translation": "MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQPCTQCCVYQDQNYSEGAVIKAEGILLQCQRDDKTLSTNPLVWRRVKP", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00370" + ], + [ + "gene_synonym", + "ASAP:ABE-0005865" + ], + [ + "gene_synonym", + "ECK1759" + ], + [ + "gene_synonym", + "GeneID:946802" + ], + [ + "gene_synonym", + "b1761" + ], + [ + "gene_synonym", + "gdhA" + ], + [ + "gene_synonym", + "JW1750" + ], + [ + "gene_synonym", + "EcoGene:EG10372" + ], + [ + "gene_synonym", + "NP_416275.1" + ], + [ + "gene_synonym", + "GI:16129715" + ] + ], + "dna_sequence": 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"ATGAAAAAAGTTTTATTACAAAACCATCCTGGGAGCGAGAAGTATTCTTTTAATGGCTGGGAAATATTTAATAGTAATTTTGAACGGATGATTAAAGAAAATAAGGCCATGCTGCTTTGTAAGTGGGGGTTTTATTTAACATGTGTTGTCGCTGTAATGTTTGTGTTCGCAGCGATAACATCCAACGGTTTGAATGAAAGAGGCCTGATTACCGCGGGATGCTCTTTTCTTTATCTATTAATTATGATGGGGCTTATTGTTCGGGCCGGTTTTAAAGCAAAAAAAGAACAACTGCATTATTATCAGGCTAAAGGTATTGAGCCGCTCAGTATCGAGAAGTTACAGGCGCTACAATTGATCGCACCTTATCGATTCTATCATAAGCAATGGTCTGAAACGCTGGAGTTCTGGCCGCGAAAGCCTGAACCTGGCAAAGATACCTTCCAATATCATGTGCTTCCTTTTGACTCGATCGATATCATAAGTAAAAGACGCGAGTCTTTAGAGGATCAATGGGGTATCGAAGATAGCGAAAGTTATTGTGCCTTAATGGAGCATTTTCTTTCTGGCGACCATGGAGCCAATACCTTTAAAGCAAACATGGAGGAAGCCCCAGAGCAGGTTATCGCCTTGTTGAATAAATTTGCTGTTTTTCCCTCAGACTATATCTCTGATTGCGCTAATCATAGCTCCGGTAAATCCTCGGCGAAGCTAATATGGGCGGCGGAATTATCATGGATGATCTCGATATCAAGCACAGCTTTTCAAAACGGGACAATTGAAGAAGAACTGGCCTGGCATTATATAATGCTTGCTTCTCGAAAGGCGCACGAGTTGTTCGAAAGCGAAGAAGATTATCAAAAAAATAGTCAAATGGGATTTCTTTACTGGCATATCTGCTGCTATCGCAGAAAGTTAACGGATGCTGAACTTGAAGCGTGTTATCGTTACGACAAGCAGTTTTGGGAGCACTACAGTAAGAAATGCCGTTGGCCCATAAGAAATGTTCCGTGGGGAGCATCATCCGTTAAATACTCATAA", 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"GI:16129717" + ], + [ + "gene_synonym", + "mutR" + ], + [ + "gene_synonym", + "EcoGene:EG11014" + ], + [ + "gene_synonym", + "b1763" + ], + [ + "gene_synonym", + "topB" + ], + [ + "gene_synonym", + "JW1752" + ] + ], + "dna_sequence": "ATGCGGTTGTTTATTGCCGAAAAACCGAGTCTGGCGCGCGCCATTGCTGATGTCCTGCCCAAACCGCACCGGAAAGGCGATGGCTTTATCGAGTGCGGTAATGGTCAGGTGGTGACCTGGTGTATCGGTCACCTGCTTGAGCAGGCGCAGCCAGACGCCTACGACAGCCGCTATGCGCGCTGGAATCTTGCGGATTTGCCGATTGTCCCGGAAAAGTGGCAATTACAGCCCCGACCCTCCGTGACCAAACAACTTAACGTCATCAAACGGTTCCTGCATGAAGCCAGCGAAATCGTTCACGCCGGGGACCCGGATCGTGAAGGGCAATTGCTGGTGGATGAAGTGCTGGACTATCTGCAACTGGCACCGGAAAAGCGCCAGCAGGTACAGCGTTGCTTGATAAACGACCTGAACCCGCAGGCGGTTGAGCGGGCGATCGACCGTCTTCGTTCCAACAGTGAGTTTGTACCGCTGTGCGTTTCTGCGCTGGCGCGAGCGCGTGCCGACTGGCTGTACGGCATCAATATGACCCGTGCGTATACCATTCTCGGTCGCAATGCCGGTTATCAGGGCGTACTTTCCGTGGGACGCGTGCAGACGCCCGTGCTTGGGCTGGTGGTGCGCCGCGATGAAGAGATTGAAAACTTCGTGGCGAAAGACTTCTTTGAAGTCAAAGCACATATCGTGACACCTGCCGATGAGCGGTTTACCGCTATCTGGCAACCGAGCGAAGCGTGTGAACCGTACCAGGATGAAGAAGGGCGCTTGTTACATCGTCCACTGGCGGAGCATGTGGTTAACCGCATTAGTGGTCAACCGGCTATTGTCACCAGCTATAACGATAAACGGGAATCAGAATCCGCGCCGCTGCCTTTTTCGCTTTCAGCGTTGCAGATTGAAGCGGCAAAACGTTTTGGTCTGAGTGCGCAGAACGTGCTTGATATCTGCCAGAAACTGTACGAAACGCACAAGCTAATCACTTATCCGCGTTCTGATTGTCGCTATTTGCCAGAAGAACATTTTGCCGGACGCCACGCGGTGATGAATGCCATCAGTGTTCATGCACCGGATCTGTTGCCGCAGCCAGTGGTAGATCCAGATATACGCAACCGCTGTTGGGATGACAAAAAGGTCGATGCGCACCACGCCATCATTCCGACCGCACGGAGTTCTGCGATCAACCTGACGGAGAACGAAGCGAAGGTCTATAACCTGATTGCCCGTCAGTATCTGATGCAATTCTGCCCGGATGCGGTGTTCCGCAAGTGTGTTATCGAACTGGACATTGCCAAAGGCAAATTTGTCGCTAAAGCGCGTTTTCTTGCTGAAGCAGGCTGGCGCACGCTGTTAGGCAGCAAAGAGCGCGATGAAGAAAACGACGGCACGCCACTGCCTGTGGTGGCGAAAGGCGATGAGTTGCTGTGTGAAAAAGGTGAAGTGGTAGAGCGGCAAACCCAGCCGCCGCGCCATTTTACCGATGCAACACTGCTTTCGGCGATGACCGGGATCGCGCGCTTTGTGCAGGATAAAGATCTGAAAAAGATCCTCCGTGCGACCGATGGTCTGGGGACAGAGGCAACGCGTGCCGGGATTATTGAACTGTTGTTCAAGCGTGGTTTCCTGACCAAAAAAGGGCGCTATATCCACTCCACCGACGCCGGAAAAGCGCTATTCCATTCGCTGCCGGAGATGGCGACGCGACCGGACATGACCGCGCACTGGGAATCGGTGCTGACGCAAATCAGCGAAAAGCAGTGTCGCTATCAGGACTTTATGCAGCCGCTGGTGGGGACGCTATATCAGCTTATTGATCAAGCCAAACGTACGCCGGTGCGGCAGTTTCGCGGCATTGTGGCTCCGGGCAGTGGTGGCAGTGCTGATAAGAAAAAGGCTGCACCGCGTAAACGTAGTGCGAAAAAAAGTCCGCCAGCAGATGAAGTCGGAAGCGGGGCGATAGCGTAA", 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653, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005872" + ], + [ + "gene_synonym", + "ECK1762" + ], + [ + "gene_synonym", + "selD" + ], + [ + "gene_synonym", + "NP_416278.1" + ], + [ + "gene_synonym", + "b1764" + ], + [ + "gene_synonym", + "GI:16129718" + ], + [ + "gene_synonym", + "GeneID:946768" + ], + [ + "gene_synonym", + "fdhB" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16456" + ], + [ + "gene_synonym", + "EcoGene:EG10943" + ], + [ + "gene_synonym", + "JW1753" + ] + ], + "dna_sequence": "ATGAGCGAGAACTCGATTCGTTTGACCCAATACAGCCACGGAGCTGGTTGCGGCTGTAAAATTTCCCCAAAAGTGTTGGAAACCATCCTGCATAGTGAGCAGGCGAAGTTTGTTGATCCGAATTTGCTTGTGGGTAATGAAACCCGCGACGATGCGGCGGTGTACGATCTGGGCAATGGCACCAGCGTTATCAGTACCACCGACTTCTTTATGCCGATCGTTGATAATCCTTTCGATTTTGGCCGCATTGCGGCGACTAACGCCATCAGCGATATCTTCGCGATGGGGGGCAAACCGATTATGGCGATTGCGATCCTCGGCTGGCCGATTAACAAACTTTCCCCAGAAATTGCCCGCGAAGTGACCGAAGGTGGACGCTATGCATGTCGTCAGGCGGGTATTGCGCTGGCTGGCGGTCACTCCATCGATGCGCCGGAGCCGATTTTTGGTCTGGCGGTAACGGGGATCGTACCGACCGAGCGGGTGAAGAAAAACAGTACCGCACAAGCCGGATGCAAACTGTTCCTGACGAAACCGCTGGGGATCGGCGTTCTTACCACGGCTGAGAAAAAATCACTGTTGAAACCAGAACATCAGGGACTGGCGACGGAAGTGATGTGCCGGATGAACATCGCAGGCGCGTCCTTTGCCAACATCGAAGGCGTAAAAGCGATGACCGACGTTACGGGCTTTGGTCTGCTGGGCCACTTGAGCGAAATGTGTCAGGGGGCTGGTGTGCAGGCACGCGTCGACTATGAAGCGATCCCGAAACTCCCCGGTGTTGAAGAGTACATTAAGTTGGGCGCAGTACCTGGCGGCACTGAACGTAACTTTGCCAGCTACGGTCATCTGATGGGTGAAATGCCGCGTGAAGTGCGCGATCTGCTGTGTGATCCGCAAACTTCTGGCGGTTTGCTGCTGGCGGTCATGCCGGAAGCAGAAAATGAGGTCAAAGCTACAGCCGCCGAGTTTGGCATTGAACTGACGGCAATTGGCGAACTGGTGCCAGCGCGCGGCGGTCGTGCCATGGTTGAGATTCGTTAA", 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"gene_synonym", + "GI:16129719" + ], + [ + "gene_synonym", + "EcoGene:EG11134" + ], + [ + "gene_synonym", + "JW1754" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACY1" + ] + ], + "dna_sequence": "ATGGATGCACTCGAACTATTGATCAATCGCCGTAGCGCCTCCCGCTTGGCTGAACCCGCGCCAACGGGTGAACAACTGCAAAACATCCTGCGTGCGGGTATGCGTGCGCCGGACCATAAGTCCATGCAACCGTGGCATTTTTTTGTGATTGAAGGGGAAGGGCGCGAGCGTTTCAGCGCCGTACTGGAACAGGGGGCGATTGCTGCCGGTAGTGATGACAAAGCTATCGACAAAGCCCGTAATGCGCCGTTCCGCGCACCGCTCATCATCACGGTGGTGGCGAAATGCGAAGAGAATCATAAAGTCCCGCGCTGGGAACAGGAAATGTCTGCCGGATGCGCGGTCATGGCGATGCAAATGGCAGCAGTTGCCCAGGGGTTTGGCGGCATCTGGCGCAGTGGCGCATTAACTGAAAGTCCGGTAGTGCGTGAAGCATTCGGTTGCCGTGAGCAGGATAAAATTGTCGGTTTTCTCTACCTCGGTACGCCGCAGCTGAAAGCATCTACGTCGATTAACGTCCCGGACCCGACGCCGTTTGTAACTTATTTCTGA", + "dna_sequence_length": 552, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_1754", + "location": [ + [ + "NC_000913", + 1848676, + "-", + 552 + ] + ], + "md5": "c0ffd2e483c09e31c3671340cab0c05e", + "parent_gene": "", + 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"ATGCGAACCCTTTGGCGATTTATTGCCGGATTTTTTAAATGGACGTGGCGTCTGCTGAATTTCGTCCGTGAAATGGTACTTAACCTGTTCTTTATTTTCCTCGTACTGGTTGGTGTGGGGATTTGGATGCAGGTCAGTGGTGGTGATTCGAAAGAAACGGCCAGTCGTGGCGCACTGCTGCTGGACATTTCTGGTGTGATCGTCGATAAACCCGACAGTTCTCAGCGGTTTAGTAAATTAAGCCGCCAGCTGCTTGGTGCCAGTTCCGATCGTCTGCAGGAAAACTCACTGTTTGATATCGTCAACACTATTCGCCAGGCGAAGGACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACAAATCGTTGCTGGATAAGCTGAAAGTTTCCACCCATGTGTTCCGCGTGGGTACGTATAAATCTGCCGTTGAACCGTTTATTCGTGATGATATGTCACCGGCAGCCCGCGAAGCTGACAGCCGCTGGATTGGTGAGCTGTGGCAAAACTATCTGAATACTGTTGCCGCTAACCGGCAGATCCCTGCTGAGCAGGTATTCCCTGGCGCGCAAGGGTTGCTTGAGGGTTTAACCAAAACCGGTGGCGATACCGCGAAATATGCACTGGAAAACAAGCTGGTCGATGCACTGGCATCGAGTGCGGAAATCGAAAAAGCACTGACCAAAGAATTCGGCTGGAGTAAGACTGATAAAAATTATCGCGCCATCAGTTATTACGATTACGCATTGAAAACGCCGGCAGATACCGGTGACAGCATCGGTGTCGTCTTTGCTAATGGCGCAATTATGGATGGCGAGGAAACTCAGGGGAATGTTGGCGGTGATACCACTGCGGCACAAATCCGCGACGCTCGCCTTGACCCGAAAGTGAAAGCGATTGTCCTGCGTGTTAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGGATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCTCGGGGATTTCGATGATGCGGTCGCCAAAGCAGCAGAGCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGATGGACAACATGTCTGGTTCTGTCCGGGCAATGTTGCCAGATGCGTTCCAGGCCATGTTACCTGCACCGCTGGCCTCGGTAGCCTCTACCGTTAAAAGTGAAAGTGACAAGCTGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAA", 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"gene_synonym", + "nam" + ], + [ + "gene_synonym", + "ydjB" + ], + [ + "gene_synonym", + "EcoGene:EG11135" + ], + [ + "gene_synonym", + "JW1757" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21369" + ], + [ + "gene_synonym", + "b1768" + ] + ], + "dna_sequence": "ATGCCCCCTCGCGCCCTGTTACTGGTCGATTTACAAAATGATTTCTGTGCTGGTGGCGCGCTCGCCGTGCCGGAAGGTGACAGTACGGTGGATGTCGCTAACCGCCTGATTGACTGGTGCCAGTCGCGCGGTGAAGCGGTTATCGCCAGTCAGGACTGGCACCCGGCGAATCACGGCAGTTTTGCCAGTCAGCACGGTGTAGAGCCTTATACGCCAGGCCAACTCGACGGTTTGCCACAAACCTTCTGGCCAGATCACTGTGTGCAGAACAGTGAAGGCGCACAATTACATCCGTTACTGCACCAAAAAGCGATCGCAGCGGTGTTCCATAAAGGCGAAAATCCTTTAGTTGACAGTTACAGTGCCTTTTTTGATAACGGCCGTCGGCAGAAAACCTCTCTCGATGACTGGTTACGCGATCATGAAATCGATGAATTGATCGTTATGGGCCTGGCTACTGACTATTGCGTGAAGTTTACCGTGCTGGACGCGTTACAGTTAGGTTATAAGGTAAACGTGATTACCGATGGTTGTCGTGGCGTGAATATCCAGCCCCAGGACAGTGCGCACGCGTTTATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAA", + "dna_sequence_length": 642, + "functions": [ + "nicotinamidase/pyrazinamidase" + ], 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"gene_synonym", + "NP_416286.4" + ], + [ + "gene_synonym", + "ydjH" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77493" + ], + [ + "gene_synonym", + "GeneID:946285" + ] + ], + "dna_sequence": 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"putative kinase" + ], + "id": "CDS_1761", + "location": [ + [ + "NC_000913", + 1856928, + "-", + 948 + ] + ], + "md5": "5a9509085404f36b7d92b51ea798197d", + "parent_gene": "", + "protein_md5": "3211e9f12703007aa8e6332f1d33d7b3", + "protein_translation": "MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG", + "protein_translation_length": 315, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16129727" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77704" + ], + [ + "gene_synonym", + "ECK1771" + ], + [ + "gene_synonym", + "JW1762" + ], + [ + "gene_synonym", + "ASAP:ABE-0005906" + ], + [ + "gene_synonym", + "b1773" + ], + [ + "gene_synonym", + "ydjI" + ], + [ + "gene_synonym", + "EcoGene:EG13485" + ], + 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"putative aldolase" + ], + "id": "CDS_1762", + "location": [ + [ + "NC_000913", + 1857769, + "-", + 837 + ] + ], + "md5": "77bc8677a56c5a95003eea5d4df4ab97", + "parent_gene": "", + "protein_md5": "d2fd2b8c192f1a528cdd62d2815dd150", + "protein_translation": "MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAEFVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVAVKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE", + "protein_translation_length": 278, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG13486" + ], + [ + "gene_synonym", + "GI:16129728" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77280" + ], + [ + "gene_synonym", + "JW1763" + ], + [ + "gene_synonym", + "ECK1772" + ], + [ + "gene_synonym", + "b1774" + ], + [ + "gene_synonym", + "NP_416288.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0005908" + ], + [ + "gene_synonym", + "ydjJ" 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"gene_synonym", + "UniProtKB/Swiss-Prot:P39173" + ], + [ + "gene_synonym", + "GeneID:946572" + ], + [ + "gene_synonym", + "JW1769" + ], + [ + "gene_synonym", + "NP_416294.4" + ], + [ + "gene_synonym", + "b1780" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG13491" + ] + ], + "dna_sequence": "ATGCAACAAAAAATGATTCAATTTAGTGGCGATGTCTCACTGCCAGCCGTAGGGCAGGGAACATGGTATATGGGCGAAGATGCCAGTCAGCGCAAAACAGAAGTTGCTGCACTACGCGCGGGCATTGAACTCGGTTTAACCCTCATTGATACCGCCGAAATGTATGCCGATGGCGGTGCCGAAAAGGTGGTTGGGGAAGCATTAACCGGTCTGCGAGAGAAGGTCTTTCTCGTCTCTAAAGTCTATCCGTGGAATGCTGGCGGGCAAAAAGCGATAAATGCATGCGAAGCCAGTTTACGCCGTCTCAATACTGATTATCTCGATCTTTACTTATTACACTGGTCTGGCAGTTTCGCTTTTGAAGAGACTGTCGCAGCGATGGAAAAATTGATCGCCCAGGGAAAAATCCGCCGCTGGGGCGTTTCTAACCTTGATTATGCTGATATGCAGGAACTCTGGCAGCTGCCGGGGGGAAATCAGTGTGCCACTAATCAGGTGCTTTACCATCTCGGTTCACGAGGAATTGAGTACGATCTACTCCCCTGGTGCCAGCAACAGCAGATGCCGGTGATGGCTTACAGTCCGTTAGCCCAGGCCGGGCGGTTGCGCAATGGACTGTTAAAAAACGCGGTAGTCAACGAAATTGCACATGCTCACAATATCAGCGCGGCACAAGTATTGTTGGCGTGGGTGATCAGTCATCAGGGTGTGATGGCGATTCCAAAAGCGGCCACGATTGCCCATGTCCAACAAAATGCGGCTGTGCTTGAGGTCGAACTTTCTTCAGCGGAATTAGCTATGCTGGATAAGGCATATCCGGCACCAAAAGGAAAAACTGCGCTGGATATGGTGTGA", + "dna_sequence_length": 855, + "functions": [ + "aldo-keto reductase, methylglyoxal to acetol, NADPH-dependent" + ], + "id": "CDS_1770", + "location": [ + [ + "NC_000913", + 1865636, + "-", + 855 + ] + ], + "md5": "a6c4f3d5aed6f1d76a1d76824a2bb665", + "parent_gene": "", + "protein_md5": "e7680b763945dee83ec1dd7660258d1e", + "protein_translation": "MQQKMIQFSGDVSLPAVGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGLREKVFLVSKVYPWNAGGQKAINACEASLRRLNTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQCATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHAHNISAAQVLLAWVISHQGVMAIPKAATIAHVQQNAAVLEVELSSAELAMLDKAYPAPKGKTALDMV", + "protein_translation_length": 284, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yeaF" + ], + [ + "gene_synonym", + "ECK1780" + ], + [ + "gene_synonym", + "GI:16129736" + ], + [ + "gene_synonym", + "GeneID:946301" + ], + [ + "gene_synonym", + "EcoGene:EG13492" + ], + [ + "gene_synonym", + "mipA" + ], + [ + "gene_synonym", + "NP_416296.1" + ], + [ + "gene_synonym", + "JW1771" + ], + [ + "gene_synonym", + "ASAP:ABE-0005928" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A908" + ], + [ + "gene_synonym", + "b1782" + ] + ], + "dna_sequence": "GTGACCAAACTCAAACTTCTGGCACTTGGAGTGCTTATCGCAACGTCTGCAGGCGTAGCGCACGCTGAAGGTAAATTTTCCCTGGGCGCAGGCGTAGGTGTCGTTGAACACCCATATAAAGATTACGATACCGATGTTTACCCAGTACCGGTAATCAACTATGAAGGCGATAACTTCTGGTTCCGTGGCTTAGGTGGTGGTTACTACCTGTGGAATGACGCAACGGATAAACTTTCAATTACCGCTTACTGGTCGCCGCTTTACTTCAAAGCGAAAGACAGTGGCGATCACCAAATGCGTCACCTGGATGACCGTAAGAGCACCATGATGGCTGGTCTGTCTTATGCTCACTTTACCCAGTACGGTTACCTGCGTACCACCCTGGCTGGCGATACCCTGGATAACAGCAACGGCATCGTCTGGGATATGGCCTGGTTGTATCGTTACACCAACGGTGGCCTGACCGTGACTCCGGGTATTGGTGTGCAGTGGAACAGCGAAAACCAGAACGAATACTATTATGGCGTATCGCGCAAAGAGTCCGCTCGCAGCGGTCTGCGTGGCTATAACCCGAACGACAGCTGGAGCCCTTACCTGGAGCTGAGCGCCAGCTACAACTTCCTCGGCGACTGGAGTGTTTACGGTACCGCACGCTACACCCGTCTGTCTGATGAAGTTACTGACAGCCCGATGGTGGATAAATCCTGGACTGGCCTGATTTCTACCGGGATCACCTACAAATTCTGA", + "dna_sequence_length": 747, + "functions": [ + "scaffolding protein for murein synthesizing machinery" + ], + "id": "CDS_1771", + "location": [ + [ + "NC_000913", + 1866472, + "-", + 747 + ] + ], + "md5": "66aaafd6a5bbc36496a62d5e5c0e4ef8", + "parent_gene": "", + "protein_md5": "51b8d2e815ac20348ba0221c0e11f6bb", + "protein_translation": "MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDTDVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHLDDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGIGVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTARYTRLSDEVTDSPMVDKSWTGLISTGITYKF", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_416297.1" + ], + [ + "gene_synonym", + "yeaG" + ], + [ + "gene_synonym", + "ECK1781" + ], + [ + "gene_synonym", + "GI:16129737" + ], + [ + "gene_synonym", + "ASAP:ABE-0005935" + ], + [ + "gene_synonym", + "EcoGene:EG13493" + ], + [ + "gene_synonym", + "JW1772" + ], + [ + "gene_synonym", + "GeneID:946297" + ], + [ + "gene_synonym", + "b1783" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACY3" + ] + ], + "dna_sequence": "ATGAATATATTCGATCACTATCGCCAGCGATATGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCAAGATCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTATCTGCTGGGGCCTGTGGGTGGGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCATCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGAACAACCAGGACATCTCCGCGCTGGTTGGGAAAGTCGATATTCGTAAACTCGAACACTACGCGCAGAATGACCCGGACGCCTACGGCTATTCCGGTGCGCTGTGCCGCGCCAATCAGGGGATCATGGAATTCGTTGAGATGTTTAAAGCACCGATTAAAGTGCTGCATCCCTTGTTAACCGCCACTCAGGAAGGTAACTACAACGGGACGGAAGGTATCTCCGCCCTGCCGTTCAACGGGATTATTCTCGCACACTCGAACGAGTCCGAATGGGTCACTTTCCGTAATAACAAAAACAACGAAGCCTTCCTCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCGTATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTGTCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCAAAGAGATCCAGACGGCCTACCTTGAATCCTATTCCGAATATGGGCAAAACATTTTCGACCGTTATGTTACCTACGCGGATTTCTGGATTCAGGATCAGGAGTATCGCGATCCGGATACCGGGCAGCTGTTTGACCGCGAGTCTCTTAACGCCGAGCTGGAGAAAATCGAGAAACCGGCGGGGATCAGTAATCCAAAAGATTTCCGCAACGAGATTGTTAACTTCGTACTGCGCGCCAGAGCGAATAACAGCGGACGCAATCCGAACTGGACCAGCTATGAAAAACTGCGCACGGTCATCGAGAAGAAAATGTTCTCCAATACCGAGGAGCTGTTGCCGGTTATCTCGTTTAACGCCAAAACGTCAACCGACGAGCAGAAGAAACACGACGACTTTGTCGACCGTATGATGGAAAAAGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAA", 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"MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLMAIGEPVMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEKKQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQILEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDENNQDISALVGKVDIRKLEHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLRISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVLEQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARANNSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKGYTRKQVRLLCEWYLRVRKSS", + "protein_translation_length": 644, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76235" + ], + [ + "gene_synonym", + "NP_416298.1" + ], + [ + "gene_synonym", + "ECK1782" + ], + [ + "gene_synonym", + "ASAP:ABE-0005938" + ], + [ + "gene_synonym", + "GI:16129738" + ], + [ + "gene_synonym", + "yeaH" + ], + [ + "gene_synonym", + "JW1773" + ], + [ + "gene_synonym", + "GeneID:946296" + ], + [ + "gene_synonym", + "EcoGene:EG13494" + ], + [ + "gene_synonym", + "b1784" + ] + ], + "dna_sequence": "ATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCGATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCGACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGAGTATCTTGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATCAGCGTTGTGCGTTCATTGCAGAACTCACTGGCGCGACGCACAGCCATGACGGCAGGCAAGCGGCGGGAACTTCATGCACTGGAAGAGAATTTGGCCATCATCAGCAACAGTGAACCTGCGCAACTGCTGGAAGAGGAACGTCTGCGCAAAGAAATTGCAGAATTACGTGCCAAAATTGAACGCGTCCCTTTTATTGACACCTTCGATTTACGTTACAAGAACTACGAGAAGCGGCCCGATCCCTCCAGCCAGGCAGTGATGTTTTGCCTGATGGACGTTTCCGGTTCAATGGATCAATCCACTAAAGATATGGCTAAGCGTTTTTATATTCTGCTGTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGCCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATGACTCTCCGCTTTGCCATGAAATCCTGGCGAAAAAATTATTACCTGTTGTTCGTTATTACAGCTATATCGAAATTACCCGTCGTGCACATCAGACATTGTGGCGAGAATATGAGCATCTGCAATCTACTTTCGACAACTTTGCGATGCAGCACATCCGCGACCAGGATGATATTTATCCGGTGTTCCGTGAACTGTTTCATAAACAAAATGCAACAGCTAAAGGCTAA", + "dna_sequence_length": 1284, + "functions": [ + "UPF0229 family protein" + ], + "id": "CDS_1773", + "location": [ + [ + "NC_000913", + 1868955, + "+", + 1284 + ] + ], + "md5": "78d75825cfc4cdac86a49d7064e08a23", + "parent_gene": "", + "protein_md5": "ba3043f2e2914b147276f033cc5c8740", + "protein_translation": "MTWFIDRRLNGKNKSMVNRQRFLRRYKAQIKQSISEAINKRSVTDVDSGESVSIPTEDISEPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQGQASQDGEGQDEFVFQISKDEYLDLLFEDLALPNLKQNQQRQLTEYKTHRAGYTANGVPANISVVRSLQNSLARRTAMTAGKRRELHALEENLAIISNSEPAQLLEEERLRKEIAELRAKIERVPFIDTFDLRYKNYEKRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILLYLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYNPAQWNIYAAQASDGDNWADDSPLCHEILAKKLLPVVRYYSYIEITRRAHQTLWREYEHLQSTFDNFAMQHIRDQDDIYPVFRELFHKQNATAKG", + "protein_translation_length": 427, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76236" + ], + [ + "gene_synonym", + "NP_416299.1" + ], + [ + "gene_synonym", + "ECK1783" + ], + [ + "gene_synonym", + "GI:16129739" + ], + [ + "gene_synonym", + "ASAP:ABE-0005941" + ], + [ + "gene_synonym", + "yeaI" + ], + [ + "gene_synonym", + "GeneID:946366" + ], + [ + "gene_synonym", + "JW1774" + ], + [ + "gene_synonym", + "b1785" + ], + [ + "gene_synonym", + "EcoGene:EG13495" + ] + ], + "dna_sequence": "ATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTATATATCTCTGCCATCAATAAAATCCAGCACTCACATTGCTCTCCTTTTTATGGTTTCTATGGGTACACAAAAATTAAAAGCTCAAAGCTTTTTTATTTTCAGTTTATTGCTGACGTTAATTTTATTTTGCATTACTACCTTATATAACGAAAACACAAATGTAAAACTCATCCCACAGATGAATTACCTGATGGTTGTTGTGGCTTTGTTTTTCCTTAACGCCGTCATTTTTCTTTTCATGTTAATGAAATATTTCACTAACAAACAAATTTTACCAACACTCATTTTAAGCCTTGCATTTTTAAGTGGCCTTATCTATTTAGTTGAAACCATTGTAATTATCCATAAACCAATTAACGGCAGTACACTGATCCAGACAAAGTCGAATGATGTTTCTATTTTCTATATTTTCCGCCAACTCAGTTTTATTTGTTTAACCTCGCTGGCGCTCTTTTGTTATGGAAAAGACAACATCCTTGACAACAATAAGAAAAAAACGGGAATCCTGTTGCTGGCGCTGATCCCTTTTTTAGTTTTTCCCCTTCTGGCACACAATCTGAGCAGTTATAACGCTGACTATTCTTTGTATGTCGTCGATTACTGTCCGGACAACCATACTGCGACCTGGGGAATCAACTATACAAAAATATTGGTTTGTCTGTGGGCATTTTTACTGTTCTTTATTATCATGCGCACACGATTAGCCAGCGAACTATGGCCGTTAATAGCATTATTATGTCTGGCATCGCTATGCTGCAACTTACTTCTACTGACTCTGGATGAGTATAATTATACTATCTGGTATATCAGTCGCGGGATTGAAGTTTCCAGTAAACTGTTTGTTGTGTCTTTTCTGATTTATAACATTTTTCAGGAGCTGCAACTCTCCAGCAAACTGGCAGTTCATGATGTGCTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATGGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTACCGAACTCAATAGTGCCCAGGCAAAAATCATTGCGGAACGTATGCGTAAAAATGTCGAACTCCTGACCGGCTTTAGTAACAGATATGATGTTCCTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGCAACAAAGTGATTATTCATCATATTTAA", + "dna_sequence_length": 1476, + "functions": [ + "putative membrane-anchored diguanylate cyclase" + ], + "id": "CDS_1774", + "location": [ + [ + "NC_000913", + 1870385, + "+", + 1476 + ] + ], + "md5": "7108c4caa8bff2870757d0e4a2b67e63", + "parent_gene": "", + "protein_md5": "5eda1cb086170e331a3c413e51100b66", + "protein_translation": "MIQSTRISMGLFFKYFLSLTKIDPGQNYISLPSIKSSTHIALLFMVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNAVIFLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVSIFYIFRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYNADYSLYVVDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLASLCCNLLLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLTNIYNRRYFFNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRPDDILARLEGEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTVFSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI", + "protein_translation_length": 491, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK1784" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76237" + ], + [ + "gene_synonym", + "JW5291" + ], + [ + "gene_synonym", + "ASAP:ABE-0005943" + ], + [ + "gene_synonym", + "GI:90111331" + ], + [ + "gene_synonym", + "yeaJ" + ], + [ + "gene_synonym", + "EcoGene:EG13496" + ], + [ + "gene_synonym", + "b1786" + ], + [ + "gene_synonym", + "NP_416300.2" + ], + [ + "gene_synonym", + "GeneID:946290" + ] + ], + "dna_sequence": 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activator of dmlA" + ], + "id": "CDS_1790", + "location": [ + [ + "NC_000913", + 1881809, + "-", + 924 + ] + ], + "md5": "b4e71098c7d8f8461fac5c3eebc26cb1", + "parent_gene": "", + "protein_md5": "672e56be62df4db0b4e7aeebbac33972", + "protein_translation": "MNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLEQTLNVVLLHRTTRRVTITEEGERIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISSFGFGRQVVAPALLALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNYRILCASPEFIAQHGAPKHLTDLSALPCLVIKERDHPFGVWQLRNKEGPHAIKVTGPLSSNHGEIVHQWCLDGQGIALRSWWDVSENIASGHLVQVLPEYYQPANVWAVYVSRLATSAKVRITVEFLRQYFAEHYPNFSLEHA", + "protein_translation_length": 307, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b1800" + ], + [ + "gene_synonym", + "GeneID:946319" + ], + [ + "gene_synonym", + "dmlA" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76251" + ], + [ + "gene_synonym", + "ASAP:ABE-0005991" + ], + [ + "gene_synonym", + "NP_416314.1" + ], + [ + "gene_synonym", + "ECK1798" + ], + [ + "gene_synonym", + "yeaU" + ], + [ + "gene_synonym", + "GI:16129754" + ], + [ + "gene_synonym", + "JW1789" + ], + [ + "gene_synonym", + "EcoGene:EG13507" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_416315.1" + ], + [ + "gene_synonym", + "GI:16129755" + ], + [ + "gene_synonym", + "ECK1799" + ], + [ + "gene_synonym", + "yeaV" + ], + [ + "gene_synonym", + "GeneID:947326" + ], + [ + "gene_synonym", + "EcoGene:EG13508" + ] + ], + "dna_sequence": 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1943414, + "+", + 786 + ] + ], + "md5": "59234b461d7d06383dd550acfacc5c1b", + "parent_gene": "", + "protein_md5": "9a5824f523e2de95b325027f33b9ef77", + "protein_translation": "MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLLGVAFGLLLDVNPFYAVIAVTLLLAGGLVWLEKRPQLAIDTLLGIMAHSALSLGLVVVSLMSNIRVDLMAYLFGDLLAVTPEDLISIAIGVVIVVAILFWQWRNLLSMTISPDLAFVDGVKLQRVKLLLMLVTALTIGVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAVLVGMVAVTGGLTFSAVYDTPAGPSVVLCAALLFILSMMKKQAS", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK1861" + ], + [ + "gene_synonym", + "ASAP:ABE-0006204" + ], + [ + "gene_synonym", + "EcoGene:EG10924" + ], + [ + "gene_synonym", + "NP_416374.1" + ], + [ + "gene_synonym", + "JW1849" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A812" + ], + [ + "gene_synonym", + "GeneID:946371" + ], + [ + "gene_synonym", + "b1860" + ], + [ + "gene_synonym", + "ruvB" + ], + [ + "gene_synonym", + "GI:16129813" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG14033" + ], + [ + "gene_synonym", + "GeneID:946380" + ], + [ + "gene_synonym", + "JW1859" + ], + [ + "gene_synonym", + "cmoA" + ], + [ + "gene_synonym", + "ECK1871" + ], + [ + "gene_synonym", + "yecO" + ], + [ + "gene_synonym", + "ASAP:ABE-0006237" + ], + [ + "gene_synonym", + "NP_416384.1" + ], + [ + "gene_synonym", + "GI:16129823" + ], + [ + "gene_synonym", + "b1870" + ] + ], + "dna_sequence": 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"gene_synonym", + "b1872" + ], + [ + "gene_synonym", + "ASAP:ABE-0006244" + ], + [ + "gene_synonym", + "JW1861" + ], + [ + "gene_synonym", + "EcoGene:EG13276" + ], + [ + "gene_synonym", + "torZ" + ] + ], + "dna_sequence": 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"ECK1875" + ], + [ + "gene_synonym", + "b1874" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67826" + ], + [ + "gene_synonym", + "dinY?" + ], + [ + "gene_synonym", + "YP_025309.2" + ], + [ + "gene_synonym", + "JW1863" + ], + [ + "gene_synonym", + "GI:90111351" + ] + ], + "dna_sequence": 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"NP_416391.4" + ], + [ + "gene_synonym", + "ECK1878" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76296" + ], + [ + "gene_synonym", + "yecT" + ], + [ + "gene_synonym", + "ASAP:ABE-0006268" + ], + [ + "gene_synonym", + "GI:90111353" + ], + [ + "gene_synonym", + "b1877" + ], + [ + "gene_synonym", + "JW5310" + ], + [ + "gene_synonym", + "GeneID:946511" + ], + [ + "gene_synonym", + "EcoGene:EG14316" + ] + ], + "dna_sequence": "GTGTTTAAATTTCTTGTATTAACATTAGGCATTATCTCTTGCCAGGCTTACGCAGAAGATACGGTTATAGTAAACGACCATGACATTTCAGCCATCAAAGATTGTTGGCAAAAAAATTCAGATGATGATACTGACGTTAACGTGATCAAATCATGCCTGCGACAAGAATACAATCTCGTCGATGCGCAATTAAATAAAGCCTATGGTGAAGCTTATCGTTATATAGAACAAGTGCCACGCACAGGTGTAAAAAAACCTGATACCGAACAACTTAACTTGCTTAAAAAATCACAGCGAGCCTGGCTGGATTTTAGGGACAAAGAATGTGAATTAATCCTTTCAAATGAGGACGTTCAGGATTTAAGTGACCCTTATTCTGAATCAGAATGGCTCTCATGTATGATCATACAGACCAATACGCGAACTCGCCAGTTGCAGCTATACCGTAACTCTGAAGATTTTTATCCAAGCCCTTTGACAAGAGGATAA", + "dna_sequence_length": 489, + "functions": [ + "uncharacterized protein" 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"gene_synonym", + "ECK1880" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76298" + ], + [ + "gene_synonym", + "ASAP:ABE-0006272" + ], + [ + "gene_synonym", + "EcoGene:EG14273" + ], + [ + "gene_synonym", + "JW1868" + ], + [ + "gene_synonym", + "flhA" + ], + [ + "gene_synonym", + "NP_416393.1" + ], + [ + "gene_synonym", + "GI:16129831" + ], + [ + "gene_synonym", + "b1879" + ], + [ + "gene_synonym", + "flaH" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0006284" + ], + [ + "gene_synonym", + "b1883" + ], + [ + "gene_synonym", + "GeneID:946394" + ], + [ + "gene_synonym", + "ECK1884" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07330" + ], + [ + "gene_synonym", + "NP_416397.1" + ], + [ + "gene_synonym", + "EcoGene:EG10147" + ], + [ + "gene_synonym", + "cheB" + ], + [ + "gene_synonym", + "JW1872" + ], + [ + "gene_synonym", + "GI:16129835" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG10148" + ], + [ + "gene_synonym", + "NP_416398.1" + ], + [ + "gene_synonym", + "GeneID:946396" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07364" + ], + [ + "gene_synonym", + "JW1873" + ], + [ + "gene_synonym", + "b1884" + ], + [ + "gene_synonym", + "GI:16129836" + ] + ], + "dna_sequence": 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"ATGATTAACCGTATCCGCGTAGTCACGCTGTTGGTAATGGTGCTGGGGGTATTCGCACTGTTACAGCTTATTTCCGGCAGTCTGTTTTTTTCTTCCCTTCACCATAGCCAGAAGAGCTTTGTGGTTTCCAATCAATTACGGGAACAGCAGGGCGAGCTGACGTCAACCTGGGATTTAATGCTGCAAACGCGCATTAACCTGAGTCGTTCAGCGGTACGGATGATGATGGATTCCTCCAATCAACAAAGTAACGCCAAAGTTGAATTGCTCGATAGCGCCAGGAAAACATTGGCGCAGGCAGCGACGCATTATAAAAAATTCAAAAGCATGGCACCGTTACCTGAAATGGTCGCTACCAGTCGTAATATTGATGAAAAATATAAAAACTATTACACAGCGTTAACTGAACTGATTGATTATCTAGATTATGGCAATACTGGAGCTTATTTCGCTCAGCCAACCCAGGGAATGCAAAATGCAATGGGCGAAGCGTTTGCTCAGTACGCCCTCAGCAGTGAAAAACTGTATCGCGATATCGTCACTGACAACGCAGATGATTACCGATTTGCCCAGTGGCAACTGGCGGTTATCGCGCTGGTGGTGGTATTGATTCTGCTGGTGGCGTGGTACGGCATTCGCCGTATGTTGCTTACTCCGCTGGCAAAAATTATTGCTCACATTCGCGAAATCGCCGGTGGTAACCTGGCGAATACCCTGACCATTGACGGGCGCAGTGAAATGGGCGACCTGGCGCAGAGCGTTTCACATATGCAACGCTCTTTGACTGACACCGTCACTCATGTCCGCGAAGGTTCAGATGCCATCTATGCCGGTACCCGTGAAATTGCGGCGGGCAACACCGATCTTTCCTCCCGTACTGAACAGCAGGCATCCGCGCTGGAAGAAACTGCCGCCAGCATGGAGCAGCTCACCGCGACAGTGAAGCAAAACGCCGATAACGCCCGCCAGGCCTCGCAACTGGCGCAAAGTGCCTCCGACACCGCCCAGCACGGCGGCAAAGTGGTGGATGGCGTAGTGAAAACGATGCATGAGATCGCCGATAGTTCGAAGAAAATTGCCGACATTATCAGCGTTATCGACGGTATTGCCTTCCAGACTAATATCCTCGCGCTGAATGCCGCGGTTGAAGCCGCGCGTGCGGGTGAACAGGGCCGTGGTTTTGCCGTGGTGGCGGGTGAAGTGCGTAATCTTGCCAGTCGCAGCGCCCAGGCGGCAAAAGAGATCAAAGCCCTCATTGAAGACTCCGTCTCACGCGTTGATACCGGTTCGGTGCTGGTCGAAAGCGCCGGGGAAACAATGAACAATATCGTCAATGCTGTCACTCGCGTGACTGACATTATGGGCGAGATTGCATCGGCATCGGATGAACAGAGCCGTGGCATCGATCAAGTCGCATTGGCGGTTTCGGAAATGGATCGCGTCACGCAACAGAACGCATCGCTGGTGCAGGAATCAGCTGCCGCCGCCGCTGCGCTGGAAGAACAGGCGAGTCGTTTAACGCAAGCAGTTTCCGCGTTCCGTCTGGCAGCCAGCCCACTCACCAATAAACCGCAAACACCATCCCGTCCTGCCAGTGAGCAACCACCGGCTCAGCCACGACTGCGAATTGCTGAACAAGATCCAAACTGGGAAACATTTTGA", 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[ + "gene_synonym", + "ASAP:ABE-0006292" + ], + [ + "gene_synonym", + "ECK1888" + ], + [ + "gene_synonym", + "GI:16129839" + ], + [ + "gene_synonym", + "GeneID:946400" + ], + [ + "gene_synonym", + "NP_416401.1" + ], + [ + "gene_synonym", + "b1887" + ], + [ + "gene_synonym", + "EcoGene:EG10149" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A964" + ], + [ + "gene_synonym", + "JW1876" + ] + ], + "dna_sequence": "ATGACCGGTATGACGAATGTAACAAAGCTGGCCAGCGAGCCGTCAGGCCAGGAATTTCTGGTATTTACCCTTGGTGATGAAGAGTACGGTATTGATATCCTGAAAGTGCAGGAGATCCGTGGCTACGATCAGGTAACACGGATTGCGAACACGCCAGCGTTTATCAAAGGCGTCACGAATCTGCGCGGCGTTATTGTGCCGATTGTTGACTTACGAATTAAGTTCAGCCAGGTGGATGTGGACTATAACGACAACACGGTAGTTATCGTCCTGAATCTCGGACAGCGGGTGGTCGGCATCGTGGTTGACGGCGTCTCAGACGTGCTTTCATTGACGGCGGAGCAAATTCGTCCGGCACCGGAATTTGCCGTGACGCTTTCAACAGAATATCTCACTGGACTGGGCGCACTGGGCGACCGGATGTTGATTCTGGTGAACATCGAAAAACTGCTGAACAGCGAAGAGATGGCGCTGTTAGATAGCGCGGCGTCAGAAGTGGCGTAA", + "dna_sequence_length": 504, + "functions": [ + "purine-binding chemotaxis protein" + ], + "id": "CDS_1880", + "location": [ + [ + "NC_000913", + 1973339, + "-", + 504 + ] + ], + "md5": "c479e1a8bce3a139a374d375a05d55f4", + "parent_gene": "", + "protein_md5": "fd56555bf7be884ab313102eaabc0485", + "protein_translation": "MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNLRGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLDSAASEVA", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006294" + ], + [ + "gene_synonym", + "ECK1889" + ], + [ + "gene_synonym", + "GeneID:946401" + ], + [ + "gene_synonym", + "GI:16129840" + ], + [ + "gene_synonym", + "b1888" + ], + [ + "gene_synonym", + "EcoGene:EG10146" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07363" + ], + [ + "gene_synonym", + "cheA" + ], + [ + "gene_synonym", + "NP_416402.1" + ], + [ + "gene_synonym", + "JW1877" + ] + ], + "dna_sequence": "GTGAGCATGGATATAAGCGATTTTTATCAGACATTTTTTGATGAAGCGGACGAACTGTTGGCTGACATGGAGCAGCATTTGCTGGTTTTGCAGCCGGAAGCGCCAGATGCCGAACAATTGAATGCCATCTTTCGGGCTGCCCACTCGATCAAAGGAGGGGCAGGAACTTTTGGCTTCAGCGTTTTGCAGGAAACCACGCATCTGATGGAAAACCTGCTCGATGAAGCCAGACGAGGTGAGATGCAACTCAACACCGACATTATCAATCTGTTTTTGGAAACGAAGGACATCATGCAAGAACAGCTCGACGCTTATAAACAGTCGCAAGAGCCGGATGCCGCCAGCTTCGATTATATCTGCCAGGCCTTGCGTCAACTGGCATTAGAAGCGAAAGGCGAAACGCCATCCGCAGTGACCCGATTAAGTGTGGTTGCCAAAAGTGAACCGCAAGATGAGCAGAGTCGCAGTCAGTCGCCGCGACGAATTATCCTTTCGCGCCTGAAGGCCGGGGAAGTCGACCTGCTGGAAGAAGAACTGGGACATCTGACAACGTTAACTGACGTGGTGAAAGGGGCGGATTCGCTCTCGGCAATATTACCGGGCGACATCGCCGAAGATGACATCACAGCGGTACTCTGTTTTGTGATTGAAGCCGATCAGATTACCTTTGAAACAGTAGAAGTCTCGCCAAAAATATCCACCCCACCAGTGCTTAAACTGGCAGCCGAACAAGCGCCAACCGGCCGCGTGGAGCGGGAAAAAACGACGCGCAGCAATGAATCCACCAGCATCCGTGTAGCGGTAGAAAAGGTTGATCAATTAATTAACCTCGTCGGCGAGCTGGTTATCACCCAGTCCATGCTTGCCCAGCGTTCCAGCGAACTGGACCCGGTTAATCATGGTGATTTGATAACCAGCATGGGGCAGTTACAACGTAACGCCCGTGATTTGCAGGAATCAGTGATGTCGATTCGCATGATGCCGATGGAATATGTTTTTAGTCGCTATCCCCGGCTGGTGCGTGATCTGGCGGGAAAACTCGGCAAGCAGGTAGAACTGACGCTGGTGGGCAGTTCTACTGAACTCGACAAAAGCCTGATAGAACGCATTATCGACCCGCTGACCCACCTGGTACGCAATAGCCTCGATCACGGTATTGAACTGCCAGAAAAACGGCTCGCCGCAGGTAAAAACAGCGTCGGAAATTTAATTCTGTCTGCCGAACATCAGGGCGGCAACATTTGCATTGAAGTGACCGACGATGGGGCGGGGCTAAACCGTGAGCGAATTCTGGCAAAAGCGGCCTCGCAAGGTTTGACTGTCAGCGAAAACATGAGCGACGACGAAGTCGCGATGCTGATATTTGCACCTGGCTTCTCCACGGCAGAGCAGGTCACCGACGTCTCCGGGCGCGGCGTCGGCATGGACGTCGTTAAACGTAATATCCAGAAGATGGGCGGTCATGTCGAAATCCAGTCGAAGCAGGGTACTGGCACTACGATCCGCATTTTACTGCCGCTGACGCTGGCCATCCTCGACGGCATGTCCGTACGCGTTGCGGATGAAGTTTTCATTCTGCCGCTGAATGCTGTTATGGAATCACTGCAACCCCGTGAAGCCGATCTCCATCCACTGGCCGGCGGCGAGCGGGTGCTGGAAGTGCGGGGTGAATATCTGCCCATCGTCGAACTGTGGAAAGTGTTCAACGTCGCGGGCGCGAAAACCGAAGCCACCCAGGGAATTGTGGTGATCTTACAAAGTGGCGGTCGCCGCTACGCCTTGCTGGTGGATCAATTAATTGGTCAACACCAGGTTGTGGTTAAAAACCTTGAAAGTAACTATCGCAAAGTCCCCGGCATTTCTGCTGCGACCATTCTTGGCGACGGCAGCGTGGCACTGATTGTTGATGTCTCCGCCTTGCAGGCGATAAACCGCGAACAACGTATGGCGAACACCGCCGCCTGA", 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"gene_synonym", + "GI:16129841" + ], + [ + "gene_synonym", + "b1889" + ], + [ + "gene_synonym", + "GeneID:946402" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF06" + ], + [ + "gene_synonym", + "flaJ" + ] + ], + "dna_sequence": "ATGAAGAATCAAGCGCATCCGATTATTGTCGTCAAACGACGCAAAGCCAAAAGCCACGGGGCAGCACATGGATCGTGGAAGATTGCTTATGCCGACTTTATGACTGCGATGATGGCCTTTTTTCTGGTGATGTGGCTGATCTCCATCTCCAGCCCAAAAGAGCTGATTCAGATTGCGGAGTACTTCCGGACTCCACTGGCGACTGCGGTTACGGGCGGCGATCGCATTTCTAATAGTGAAAGCCCAATTCCCGGCGGTGGTGATGATTACACCCAAAGCCAGGGGGAAGTGAATAAGCAGCCGAACATCGAAGAGCTGAAAAAACGCATGGAGCAAAGTCGATTGCGGAAATTGCGGGGTGATCTCGACCAGTTGATAGAGTCCGATCCGAAACTGCGGGCGTTACGTCCCCATCTCAAAATCGATCTGGTCCAGGAAGGTCTACGTATTCAGATCATCGATAGCCAGAATCGCCCGATGTTTAGAACCGGCAGTGCCGATGTCGAACCCTATATGCGCGACATTCTGCGCGCCATTGCGCCTGTACTGAACGGTATTCCCAACCGTATTAGCCTTTCAGGTCATACCGATGATTTCCCCTACGCCAGCGGTGAGAAAGGATATAGCAACTGGGAGCTTTCTGCCGATCGGGCCAATGCATCCCGCCGCGAACTGATGGTCGGAGGGTTGGATAGCGGCAAAGTGTTACGTGTCGTCGGCATGGCGGCAACGATGCGCTTAAGCGATCGCGGACCTGATGATGCCGTCAACCGTCGCATCAGCCTGCTGGTACTGAACAAACAAGCCGAACAGGCCATTTTGCATGAAAACGCCGAAAGCCAGAATGAGCCAGTAAGCGCCCTGGAAAAACCTGAGGTTGCACCACAGGTCAGTGTTCCCACAATGCCATCAGCCGAACCGAGGTGA", + "dna_sequence_length": 927, + "functions": [ + "protein that enables flagellar motor rotation" + ], + "id": "CDS_1882", + "location": [ + [ + "NC_000913", + 1976255, + "-", + 927 + ] + ], + "md5": "f456d2c84b6c49e19f8846156fad77ce", + "parent_gene": "", + "protein_md5": "10457d0c0a94dd8cb27f07f331deffdf", + "protein_translation": "MKNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQAEQAILHENAESQNEPVSALEKPEVAPQVSVPTMPSAEPR", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "motA" + ], + [ + "gene_synonym", + "GeneID:947564" + ], + [ + "gene_synonym", + "ECK1891" + ], + [ + "gene_synonym", + "GI:16129842" + ], + [ + "gene_synonym", + "ASAP:ABE-0006299" + ], + [ + "gene_synonym", + "EcoGene:EG10601" + ], + [ + "gene_synonym", + "JW1879" + ], + [ + "gene_synonym", + 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"CDS_1883", + "location": [ + [ + "NC_000913", + 1977139, + "-", + 888 + ] + ], + "md5": "d037776c7ec7e94b6c51eee4951ff9ab", + "parent_gene": "", + "protein_md5": "7e6fbe02d7c51fe3800d8b7ecee169c6", + "protein_translation": "MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKALPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADSVMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAAVMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETSKMMQCVKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQTTTEEA", + "protein_translation_length": 295, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK1892" + ], + [ + "gene_synonym", + "GeneID:947280" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABY7" + ], + [ + "gene_synonym", + "JW1880" + ], + [ + "gene_synonym", + "GI:16129843" + ], + [ + "gene_synonym", + "flhC" + ], + [ + "gene_synonym", + "NP_416405.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0006301" + ], + [ + "gene_synonym", + "EcoGene:EG10319" + ], + [ + "gene_synonym", + "flaI" + ], + [ + "gene_synonym", + "b1891" + ] + ], + "dna_sequence": "ATGAGTGAAAAAAGCATTGTTCAGGAAGCGCGGGATATTCAGCTGGCAATGGAATTGATCACCCTGGGCGCTCGTTTGCAGATGCTGGAAAGCGAAACACAGTTAAGTCGCGGACGCCTGATAAAACTTTATAAAGAACTGCGCGGAAGCCCACCGCCGAAAGGCATGCTGCCATTCTCAACCGACTGGTTTATGACCTGGGAACAAAACGTTCATGCTTCGATGTTCTGTAATGCATGGCAGTTTTTACTGAAAACCGGTTTGTGTAATGGCGTCGATGCGGTGATCAAAGCCTACCGTTTATACCTTGAACAGTGCCCACAAGCAGAAGAAGGACCACTGCTGGCATTAACCCGTGCCTGGACATTGGTGCGGTTTGTTGAAAGTGGATTACTGCAACTTTCCAGCTGCAACTGCTGCGGCGGCAATTTTATTACCCACGCTCACCAGCCTGTTGGCAGCTTTGCCTGCAGCTTATGTCAACCGCCATCCCGGGCAGTAAAAAGACGTAAACTTTCCCAGAATCCTGCCGATATTATCCCACAACTGCTGGATGAACAGAGAGTACAGGCTGTTTAA", + "dna_sequence_length": 579, + "functions": [ + "flagellar class II regulon transcriptional activator, with FlhD" + ], + "id": "CDS_1884", + "location": [ + [ + "NC_000913", + 1977844, + "-", + 579 + ] + ], + "md5": "88cc27b2fc9ac4e289f3b5cf1002e3a8", + "parent_gene": "", + "protein_md5": "b655b9e362d93c5fd3fada70d38c158f", + "protein_translation": "MSEKSIVQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPFSTDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLYLEQCPQAEEGPLLALTRAWTLVRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLCQPPSRAVKRRKLSQNPADIIPQLLDEQRVQAV", + "protein_translation_length": 192, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_416406.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8S9" + ], + [ + "gene_synonym", + "ECK1893" + ], + [ + "gene_synonym", + "ASAP:ABE-0006303" + ], + [ + "gene_synonym", + "JW1881" + ], + [ + "gene_synonym", + "EcoGene:EG10320" + ], + [ + "gene_synonym", + "flbB" + ], + [ + "gene_synonym", + "GeneID:945442" + ], + [ + "gene_synonym", + "flhD" + ], + [ + "gene_synonym", + "b1892" + ], + [ + "gene_synonym", + "GI:145698279" + ] + ], + "dna_sequence": "ATGCATACCTCCGAGTTGCTGAAACACATTTATGACATCAACTTGTCATATTTACTACTTGCACAGCGTTTGATTGTTCAGGACAAAGCGTCCGCTATGTTTCGTCTCGGCATAAATGAAGAAATGGCGACAACGTTAGCGGCACTGACTCTTCCGCAAATGGTTAAGCTGGCAGAAACCAATCAACTGGTTTGTCACTTCCGTTTTGACAGCCACCAGACGATTACTCAGTTGACGCAAGATTCCCGCGTTGACGATCTCCAGCAAATTCATACCGGCATCATGCTCTCAACACGCTTGCTGAATGATGTTAATCAGCCTGAAGAAGCGCTGCGCAAGAAAAGGGCCTGA", + "dna_sequence_length": 351, + "functions": [ + "flagellar class II regulon transcriptional activator, with FlhC" + ], + "id": "CDS_1885", + "location": [ + [ + "NC_000913", + 1978197, + "-", + 351 + ] + ], + "md5": "299d2e96e523782319df5b511d3d6d75", + "parent_gene": "", + "protein_md5": "7f806aa4d5cc9a3a755ef1ace640419b", + "protein_translation": "MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMATTLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQDSRVDDLQQIHTGIMLSTRLLNDVNQPEEALRKKRA", + "protein_translation_length": 116, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK0022" + ], + [ + "gene_synonym", + "NP_416407.1" + ], + [ + "gene_synonym", + "insB1" + ], + [ + "gene_synonym", + "GeneID:945867" + ], + [ + "gene_synonym", + "GI:16129845" + ], + [ + "gene_synonym", + "EcoGene:EG40002" + ], + [ + "gene_synonym", + "b1893" + ], + [ + "gene_synonym", + "ASAP:ABE-0006308" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF30" + ] + ], + "dna_sequence": "ATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGTCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA", + "dna_sequence_length": 504, + "functions": [ + "IS1 transposase B" + ], + "id": "CDS_1886", + "location": [ + [ + "NC_000913", + 1979021, + "-", + 504 + ] + ], + "md5": "9b3b0a523236fbbb94e9a150e2349e7c", + "parent_gene": "", + "protein_md5": "a7ce8c3d73c6cbaea2dc673889ba240c", + "protein_translation": "MPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "insA" + ], + [ + "gene_synonym", + "NP_416408.1" + ], + [ + "gene_synonym", + "GI:16129846" + ], + [ + "gene_synonym", + "EcoGene:EG40001" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF13" + ], + [ + "gene_synonym", + "ASAP:ABE-0006311" + ], + [ + "gene_synonym", + "b1894" + ], + [ + "gene_synonym", + "ECK4541" + ], + [ + "gene_synonym", + "GeneID:945800" + ] + ], + "dna_sequence": "GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA", + "dna_sequence_length": 276, + "functions": [ + "IS1 repressor TnpA" + ], + "id": "CDS_1887", + "location": [ + [ + "NC_000913", + 1979215, + "-", + 276 + ] + ], + "md5": "db0d756792984c1e534a2dad9bfdde5f", + "parent_gene": "", + "protein_md5": "edc4311bb7ac3cf8e138290b7630fdda", + "protein_translation": "MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK1894" + ], + [ + "gene_synonym", + "GI:16129847" + ], + [ + "gene_synonym", + "JW1884" + ], + [ + "gene_synonym", + "EcoGene:EG12862" + ], + [ + "gene_synonym", + "NP_416409.1" + ], + [ + "gene_synonym", + "GeneID:946404" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46888" + ], + [ + "gene_synonym", + "ASAP:ABE-0006316" + ], + [ + "gene_synonym", + "yecG" + ], + [ + "gene_synonym", + "b1895" + ], + [ + "gene_synonym", + "uspC" + ] + ], + "dna_sequence": "ATGAGCTATAGCAATATTCTTGTCGCTGTTGCGGTTACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGACCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAGTTAATTCAGGATGCGGGGTATCCCGTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCGCGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAA", + "dna_sequence_length": 429, + "functions": [ + "universal stress protein" + ], + "id": "CDS_1888", + "location": [ + [ + "NC_000913", + 1979753, + "+", + 429 + ] + ], + "md5": "e9e64593c83dec8cb954cee037a7d9ee", + "parent_gene": "", + "protein_md5": "d3a6fcf02a643e458dc70faef1d65bcb", + 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"ATGCCACTGCATAATTTAACCCGTTTTCCACGGCTGGAGTTTATCGGCGCGCCAACGCCGCTCGAATATCTGCCGCGCTTTTCTGATTATCTAGGACGGGAAATTTTCATCAAACGGGATGACGTCACCCCCATGGCAATGGGCGGCAATAAATTACGTAAGCTGGAATTTCTCGCGGCAGATGCTCTGCGTGAAGGTGCCGATACGCTGATTACTGCCGGGGCGATCCAGTCTAACCATGTGCGGCAGACTGCCGCAGTCGCTGCCAAACTCGGTCTGCACTGCGTGGCGCTGCTGGAAAATCCTATTGGCACAACCGCAGAAAACTATTTAACCAACGGCAATCGCTTGTTGCTGGATCTGTTCAATACCCAGATTGAAATGTGCGACGCACTGACCGATCCCAATGCCCAACTGGAAGAGCTGGCGACGCGAGTCGAAGCACAAGGCTTTCGCCCGTATGTCATTCCGGTTGGCGGTTCTAATGCTCTTGGCGCGCTAGGTTATGTGGAGAGTGCGCTGGAAATCGCGCAACAGTGTGAAGGGGCGGTTAATATTTCATCGGTGGTAGTCGCATCGGGCAGTGCCGGAACTCACGCCGGACTGGCTGTTGGGCTGGAACACCTGATGCCTGAAAGCGAACTGATTGGCGTGACCGTGTCGCGTTCCGTTGCCGATCAATTGCCGAAAGTGGTTAACCTACAACAGGCGATTGCGAAAGAACTGGAGCTGACCGCATCAGCGGAAATTTTACTCTGGGATGACTATTTTGCACCTGGCTACGGCGTGCCGAACGACGAAGGCATGGAAGCAGTGAAATTGCTGGCGCGGCTGGAAGGCATTCTGCTTGATCCTGTGTATACCGGAAAAGCGATGGCGGGGCTGATTGACGGTATCAGTCAGAAACGCTTCAAAGATGAAGGGCCGATTCTGTTTATTCATACCGGCGGTGCGCCTGCGCTGTTCGCCTATCATCCCCACGTTTAG", + "dna_sequence_length": 987, + "functions": [ + "D-cysteine desulfhydrase, PLP-dependent" + ], + "id": "CDS_1909", + "location": [ + [ + "NC_000913", + 1999480, + "-", + 987 + ] + ], + "md5": "0cf1ccbe976f29bad821dcdc2b801452", + "parent_gene": "", + "protein_md5": "5915fd294adc50bead12c662ce0d2e54", + "protein_translation": "MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAKELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPALFAYHPHV", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "fliY" + ], + [ + "gene_synonym", + "b1920" + ], + [ + "gene_synonym", + "ASAP:ABE-0006392" + ], + [ + "gene_synonym", + "ECK1919" + ], + [ + "gene_synonym", + "NP_416430.1" + ], + [ + "gene_synonym", + "EcoGene:EG12680" + ], + [ + "gene_synonym", + "yzzR" + ], + [ + "gene_synonym", + "GeneID:948833" + ], + [ + "gene_synonym", + "GI:16129867" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEM9" + ], + [ + "gene_synonym", + "JW1905" + ] + ], + "dna_sequence": 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"ATGATGGTGCAGCACCTGAAAAGACGGCCATTAAGCCGCTATCTTAAAGACTTTAAACACAGCCAGACCCATTGCGCGCATTGCCGTAAATTACTCGATCGCATTACCTTAGTTCGCGACGGCAAAATAGTGAATAAAATCGAGATTTCCCGCCTGGACACGCTGCTTGATGAAAATGGCTGGCAAACGGAACAAAAATCATGGGCGGCATTGTGCCGATTTTGCGGTGATTTACATTGCAAAACGCAGAGTGATTTTTTCGATATTATCGGCTTTAAGCAATTTCTTTTTGAGCAAACTGAAATGAGCCCAGGTACGGTGCGTGAATATGTCGTTCGTTTGCGCCGTTTGGGGAATCATCTACACGAGCAAAATATTTCCCTCGATCAGCTGCAGGACGGTTTCCTTGATGAAATCCTCGCCCCGTGGCTGCCCACCACCAGCACCAACAATTACCGCATCGCGTTACGGAAGTATCAACACTATCAGCGCCAAACCTGTACCAGACTTGTGCAGAAATCCTCCAGCCTGCCTTCTTCTGATATATATTAA", + "dna_sequence_length": 552, + "functions": [ + "RpoS antagonist", + "putative regulator of FliA activity" + ], + "id": "CDS_1911", + "location": [ + [ + "NC_000913", + 2001024, + "-", + 552 + ] + ], + "md5": "8e51ee4bbabdd904f7c5812dca1ccc72", + "parent_gene": "", + "protein_md5": "79fa884d88f90b5215c9375b9faf1cfb", + "protein_translation": "MMVQHLKRRPLSRYLKDFKHSQTHCAHCRKLLDRITLVRDGKIVNKIEISRLDTLLDENGWQTEQKSWAALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEMSPGTVREYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTSTNNYRIALRKYQHYQRQTCTRLVQKSSSLPSSDIY", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG11355" + ], + [ + "gene_synonym", + "b1922" + ], + [ + "gene_synonym", + "ECK1921" + ], + [ + "gene_synonym", + "GeneID:948824" + ], + [ + "gene_synonym", + "ASAP:ABE-0006396" + ], + [ + "gene_synonym", + "GI:49176170" + ], + [ + "gene_synonym", + "flaD" + ], + [ + "gene_synonym", + "rpoF" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEM6" + ], + [ + "gene_synonym", + "NP_416432.3" + ], + [ + "gene_synonym", + "fliA" + ], + [ + "gene_synonym", + "JW1907" + ] + ], + "dna_sequence": "GTGAATTCACTCTATACCGCTGAAGGTGTAATGGATAAACACTCGCTGTGGCAGCGTTATGTCCCGCTGGTGCGTCACGAAGCATTGCGCCTGCAGGTTCGACTGCCCGCGAGCGTGGAACTTGACGATCTGCTACAGGCGGGCGGCATTGGGTTACTTAATGCCGTCGAACGCTATGACGCCCTACAAGGAACGGCATTTACAACTTACGCAGTGCAGCGTATCCGTGGCGCTATGCTGGATGAACTTCGCAGCCGTGACTGGGTGCCGCGCAGCGTGCGACGCAACGCGCGTGAAGTGGCACAGGCAATAGGGCAACTGGAGCAGGAACTTGGCCGCAACGCCACGGAAACTGAGGTAGCGGAACGTTTAGGGATCGATATTGCCGATTATCGCCAAATGTTGCTCGACACCAATAACAGCCAGCTCTTCTCCTACGATGAGTGGCGCGAAGAGCACGGCGATAGCATCGAACTGGTTACTGATGATCATCAGCGAGAAAACCCGCTACAACAACTACTGGACAGTAATCTGCGCCAGCGGGTGATGGAAGCCATCGAAACGTTGCCGGAGCGCGAAAAACTGGTATTAACCCTCTATTACCAGGAAGAGCTGAATCTCAAAGAGATTGGCGCGGTGCTGGAGGTCGGGGAATCGCGGGTCAGTCAGTTACACAGCCAGGCTATTAAACGGTTACGCACTAAACTGGGTAAGTTATAA", + "dna_sequence_length": 720, + "functions": [ + "RNA polymerase, sigma 28 (sigma F) factor" + ], + "id": "CDS_1912", + "location": [ + [ + "NC_000913", + 2001789, + "-", + 720 + ] + ], + "md5": "7b38cdcae9fe8a1fb52935aadadfb136", + "parent_gene": "", + "protein_md5": 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"uncharacterized protein" + ], + "id": "CDS_1940", + "location": [ + [ + "NC_000913", + 2024823, + "-", + 189 + ] + ], + "md5": "31ddfd23f6836be1959289ef74b2c252", + "parent_gene": "", + "protein_md5": "5972148c0e82168c630cd5564dfe2049", + "protein_translation": "MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVSLEDYPLGIWFFNEAGHQDGIFVEKAE", + "protein_translation_length": 62, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK1951" + ], + [ + "gene_synonym", + "EcoGene:EG14387" + ], + [ + "gene_synonym", + "NP_416463.4" + ], + [ + "gene_synonym", + "GeneID:946469" + ], + [ + "gene_synonym", + "ASAP:ABE-0006488" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64519" + ], + [ + "gene_synonym", + "GI:90111359" + ], + [ + "gene_synonym", + "b1953" + ], + [ + "gene_synonym", + "yodD" + ], + [ + "gene_synonym", + "JW5317" + ] + ], + "dna_sequence": 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"b1955" + ], + [ + "gene_synonym", + "NP_416464.1" + ], + [ + "gene_synonym", + "GI:16129901" + ], + [ + "gene_synonym", + "yedP" + ] + ], + "dna_sequence": "ATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGCCCCCTGGCTCACCCGTTTACGCGAAGCAAATGTTCCCGTCATTCTCTGTAGCAGTAAAACATCAGCGGAAATGCTGTACTTGCAAAAAACGTTGGGGCTACAAGGTTTACCGCTGATTGCCGAAAATGGCGCAGTGATCCAGCTTGCTGAGCAATGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCGCCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACAGTTTATGCAGGGTGCGCGCTTCTGGCACGTACTGGATGCTTCTGCCGGAAAAGATCAGGCTGCCAACTGGATTATCGCGACCTATCAACAATTGTCAGGCAAACGCCCAACCACACTTGGCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAA", + 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"gene_synonym", + "UniProtKB/Swiss-Prot:P64517" + ], + [ + "gene_synonym", + "ECK1955" + ], + [ + "gene_synonym", + "GeneID:946466" + ], + [ + "gene_synonym", + "NP_416466.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0006498" + ], + [ + "gene_synonym", + "EcoGene:EG14307" + ], + [ + "gene_synonym", + "b1957" + ], + [ + "gene_synonym", + "JW1940" + ], + [ + "gene_synonym", + "GI:16129903" + ], + [ + "gene_synonym", + "yodC" + ] + ], + "dna_sequence": "ATGAGCTTTATGGTTAGTGAGGAAGTTACGGTTAAAGAGGGCGGCCCGCGGATGATTGTCACTGGATACTCCAGCGGTATGGTTGAGTGTCGTTGGTATGACGGTTACGGGGTCAAGCGGGAAGCTTTTCATGAAACCGAGCTTGTTCCGGGGGAGGGGAGTCGTTCTGCGGAAGAAGTGTGA", + "dna_sequence_length": 183, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1944", + "location": [ + [ + "NC_000913", + 2028370, + "-", + 183 + ] + ], + "md5": "c543cbe4e0b3a8b36a0155ebbbecba36", + "parent_gene": "", + "protein_md5": "d2701625661e9ab22487ce301bc6f4de", + "protein_translation": 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"MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHHALNSTLEISGLRMDSVSHSVSRDNISITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSFVAVKK", + "protein_translation_length": 223, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006537" + ], + [ + "gene_synonym", + "ECK1966" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76341" + ], + [ + "gene_synonym", + "GeneID:946485" + ], + [ + "gene_synonym", + "NP_416479.1" + ], + [ + "gene_synonym", + "EcoGene:EG14046" + ], + [ + "gene_synonym", + "JW1953" + ], + [ + "gene_synonym", + "yedX" + ], + [ + "gene_synonym", + "b1970" + ], + [ + "gene_synonym", + "GI:16129916" + ], + [ + "gene_synonym", + "hiuH" + ] + ], + "dna_sequence": 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"ATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGGTATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTATGAATTCGGGCTGGATAAAGCCGATCCCGCCGCTAATGCTGGTAGCCTGAAAACCGATCCATGGACACTGAAAATCAGCGGCGAAGTGGCAAAACCATTGACCCTCGATCATGATGACTTAACCCGTCGCTTCCCGCTGGAAGAGCGTATTTATCGTATGCGCTGCGTGGAAGCGTGGTCGATGGTGGTGCCGTGGATTGGTTTTCCGCTGCACAAATTGCTGGCGCTTGCCGAACCTACCAGCAATGCGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTATTAAGCTGACCCGCGAGCGTCCGCCAACCACCTGGAATCTGGCAGCGCCTGACGAATACGGTTTTTACGCCAACGTTAATCCGTATGTTGATCACCCGCGCTGGTCACAGGCTACCGAACGATTTATTGGTTCAGGCGGCATCCTCGATGTACAGCGCCAGCCAACGCTACTGTTTAATGGTTACGCCGCCCAGGTGGCATCGCTGTATCGTGGCCTGGATTTGCGGGAGAATTTCTAA", 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"gene_synonym", + "GI:16129918" + ], + [ + "gene_synonym", + "JW1955" + ], + [ + "gene_synonym", + "yedZ" + ], + [ + "gene_synonym", + "b1972" + ], + [ + "gene_synonym", + "NP_416481.1" + ] + ], + "dna_sequence": "ATGCGTCTGACAGCAAAACAGGTGACATGGCTGAAAGTTTGCCTGCATCTTGCCGGATTGTTGCCGTTTCTCTGGCTGGTCTGGGCGATCAATCACGGTGGACTGGGTGCCGATCCGGTGAAAGATATTCAGCATTTTACTGGTCGCACTGCACTGAAATTTTTGCTGGCGACCTTGTTAATCACCCCTCTGGCACGCTACGCAAAACAGCCGTTATTGATACGCACTCGCCGCCTGTTAGGATTATGGTGCTTTGCCTGGGCGACACTGCATTTAACAAGTTACGCATTGCTGGAGCTGGGCGTGAATAATCTGGCGTTATTAGGTAAGGAGTTAATTACCCGGCCTTATTTAACGTTAGGTATTATCAGCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGTCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGTACTGCTTTTAGCCTTACGGTATAAGAAGTTGCGTTCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAA", + "dna_sequence_length": 636, + "functions": [ + "inner membrane heme subunit for periplasmic YedYZ reductase" + ], + "id": "CDS_1957", + "location": [ + [ + "NC_000913", + 2040483, + "+", + 636 + ] + ], + "md5": "a2cff9751cdf2a869221b7632d5dbe9e", + "parent_gene": "", + "protein_md5": "13b9f39d8eb471e07abed1c450160993", + "protein_translation": "MRLTAKQVTWLKVCLHLAGLLPFLWLVWAINHGGLGADPVKDIQHFTGRTALKFLLATLLITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGVNNLALLGKELITRPYLTLGIISWVILLALAFTSTQAMQRKLGKHWQQLHNFVYLVAILAPIHYLWSVKIISPQPLIYAGLAVLLLALRYKKLRSLFNRLRKQVHNKLSV", + "protein_translation_length": 211, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_416482.1" + ], + [ + "gene_synonym", + "zinT" + ], + [ + "gene_synonym", + "EcoGene:EG14049" + ], + [ + "gene_synonym", + "ASAP:ABE-0006546" + ], + [ + "gene_synonym", + "ECK1969" + ], + [ + "gene_synonym", + "GeneID:946480" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76344" + ], + [ + "gene_synonym", + "JW1956" + ], + [ + "gene_synonym", + "GI:16129919" + ], + [ + "gene_synonym", + "yodA" + ], + [ + "gene_synonym", + "b1973" + ] + ], + "dna_sequence": 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"MAIRLYKLAVALGVFIVSAPAFSHGHHSHGKPLTEVEQKAANGVFDDANVQNRTLSDWDGVWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYHKGYATDIEMIGIEDGIVEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPKYIQFSDHIIAPRKSSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK1970" + ], + [ + "gene_synonym", + "NP_416483.4" + ], + [ + "gene_synonym", + "GeneID:946491" + ], + [ + "gene_synonym", + "ASAP:ABE-0006552" + ], + [ + "gene_synonym", + "GI:90111363" + ], + [ + "gene_synonym", + "yodB" + ], + [ + "gene_synonym", + "b1974" + ], + [ + "gene_synonym", + "EcoGene:EG14050" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76345" + ], + [ + "gene_synonym", + "JW5323" + ] + ], + "dna_sequence": 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"MNRFSKTQIYLHWITLLFVAITYAAMELRGWFPKGSSTYLLMRETHYNAGIFVWVLMFSRLIIKHRYSDPSIVPPPPAWQMKAASLMHIMLYITFLALPLLGIALMAYSGKSWSFLGFNVSPFVTPNSEIKALIKNIHETWANIGYFLIAAHAGAALFHHYIQKDNTLLRMMPRRK", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yeeI" + ], + [ + "gene_synonym", + "ASAP:ABE-0006558" + ], + [ + "gene_synonym", + "ECK1972" + ], + [ + "gene_synonym", + "GeneID:946489" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76346" + ], + [ + "gene_synonym", + "GI:90111364" + ], + [ + "gene_synonym", + "mtfA" + ], + [ + "gene_synonym", + "EcoGene:EG13377" + ], + [ + "gene_synonym", + "b1976" + ], + [ + "gene_synonym", + "NP_416484.2" + ], + [ + "gene_synonym", + "JW1958" + ] + ], + "dna_sequence": "ATGATTAAGTGGCCCTGGAAAGTACAAGAATCAGCACATCAAACTGCCCTTCCCTGGCAGGAAGCACTATCGATCCCCCTTTTAACGTGTCTGACGGAACAGGAACAAAGCAAATTAGTCACTCTTGCCGAACGTTTTTTACAGCAAAAGCGGCTTGTTCCTTTACAGGGCTTTGAACTGGATTCATTAAGAAGCTGCCGGATAGCACTTCTATTTTGCCTACCCGTTCTGGAGTTAGGACTGGAATGGCTGGATGGTTTTCATGAAGTCTTAATTTATCCTGCGCCATTTGTGGTCGATGATGAATGGGAAGACGATATCGGTCTGGTGCATAACCAACGTATTGTTCAGTCAGGTCAGAGCTGGCAGCAAGGGCCTATCGTTTTGAACTGGTTGGATATACAAGATTCTTTTGATGCTTCTGGTTTTAACCTGATTATTCATGAAGTCGCTCATAAGCTGGACACCCGTAACGGCGATCGCGCCAGCGGAGTTCCCTTTATTCCGTTGCGTGAGGTTGCTGGCTGGGAACACGATCTTCATGCTGCAATGAACAACATTCAGGAAGAAATCGAATTGGTTGGCGAGAATGCGGCGAGCATTGATGCTTATGCAGCCAGCGATCCTGCTGAATGTTTTGCCGTACTTTCTGAATATTTCTTTAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCAGAGACTGCATCACGCTAATGATACAGACTCGTTTTCGGCGACGAATGTTCATTAA", + "dna_sequence_length": 798, + "functions": [ + "anti-repressor for DgsA(Mlc)" + ], + "id": "CDS_1960", + "location": [ + [ + "NC_000913", + 2043651, + "+", + 798 + ] + ], + "md5": "20f49bce1b9cbcf2d324ebfc75d41dad", + "parent_gene": "", + "protein_md5": "b6424b2fd8a2a7154cf2fe3b6d9e67f5", + "protein_translation": "MIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVTLAERFLQQKRLVPLQGFELDSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGDRASGVPFIPLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAPELFAPRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH", + "protein_translation_length": 265, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK1974" + ], + [ + "gene_synonym", + "GeneID:946498" + ], + [ + "gene_synonym", + "EcoGene:EG13378" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76347" + ], + [ + "gene_synonym", + "yeeJ" + ], + [ + "gene_synonym", + "b1978" + ], + [ + "gene_synonym", + "NP_416485.4" + ], + [ + "gene_synonym", + "ASAP:ABE-0006563" + ], + [ + "gene_synonym", + "JW5833" + ], + [ + "gene_synonym", + "GI:145698281" + ] + ], + "dna_sequence": "ATGGCTACGAAGAAGAGAAGTGGAGAAGAAATAAATGACCGACAAATATTATGCGGGATGGGAATTAAACTACGCCGCTTAACTGCGGGTATCTGTCTGATAACTCAACTTGCGTTCCCTATGGCTGCGGCAGCACAAGGTGTGGTAAACGCCGCAACCCAACAACCAGTTCCTGCACAAATTGCCATTGCAAATGCCAATACGGTGCCCTACACCCTTGGAGCGTTGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGTAATAGCAGTGACAACCTCGAGCAACAGATAGCCAGTACTTCACAGCAAATCGGGTCTCTGCTCGCCGAAGATATGAACAGCGAGCAAGCGGCAAATATGGCGCGTGGATGGGCCTCTTCTCAGGCTTCAGGCGCAATGACAGACTGGTTAAGCCGCTTCGGTACCGCAAGAATCACGCTGGGCGTGGATGAAGATTTTAGCCTGAAGAACTCCCAGTTCGATTTTCTCCATCCGTGGTATGAAACGCCTGATAATCTCTTTTTCAGTCAGCATACTCTCCATCGTACTGACGAGCGTACGCAGATTAACAACGGCTTAGGTTGGCGTCATTTCACTCCCACATGGATGTCGGGCATCAACTTCTTTTTCGACCACGATCTTAGCCGTTACCACTCCCGCGCCGGCATTGGCGCGGAGTACTGGCGCGACTATCTAAAATTAAGCAGTAACGGCTATTTGCGACTGACCAACTGGCGCAGCGCACCTGAACTGGACAACGATTATGAAGCACGCCCGGCCAATGGCTGGGATGTACGCGCAGAAAGCTGGCTACCCGCCTGGCCGCACCTTGGCGGTAAACTGGTCTATGAACAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTATACCCCCTTCCCGCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCTGGCAGCGCAATGCAGAAACAGCTTGACCCGAATGAAGTCGCTGCACGGCGTAGCCTTGCAGGCAGCCGTTATGATCTGGTGGATCGCAACAACAATATCGTTCTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGACAGACCCCGTGACAGGGAAGTCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTGGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGATAATGGTGACGGAAGCTATACCCAGATCCTGACCACAGGAGCGATGTCTGGCACGCTGACGCTGATGCCACAGCTGAATGGTGTGGATGCGGCTAAAGCCCCCGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGTGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCGAAAATTGCGACATTATCTGCCAGCAATAATGGTGTGCTCGCCAATGAGAATGCAGCAAACACCGTCTCGGTCAATGTCGCTGATGAAGGAAGCAACCCAATCAATGATCATACCGTCACGTTTGCGGTATTAAGCGGATCGGCAACTTCCTTCAACAATCAAAACACCGCAAAAACGGATGTTAATGGTCTGGCGACTTTTGATCTGAAAAGTAGTAAGCAGGAAGACAACACGGTTGAAGTCACCCTTGAAAATGGCGTGAAACAAACGTTAATCGTCAGTTTTGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTACGCTGACCAGTTTGAAAAATGGTGATTATAGGGTTACGGCCTCTGTGAGCTCTGGTTCCCAGGCTAATCAACAGGTGAATTTTATCGGTGATCAAAGTACTGCTGCCCTGACCCTCAGTGTGCCTTCAGGTGATATCACCGTCACCAACACAGCTCCGCAATATATGACTGCAACCTTGCAGGATAAAAATGGCAACCCACTAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGTTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAATCATCCGGTGGCGGGGATAACGGTAAACTTCACCATGCCACAGGACGTTGCGGCAAACTTTACCCTTGAAAATAACGGTATTGCCATCACTCAGGCCAATGGGGAAGCGCATGTCACGCTGAAAGGTAAAAAAGCGGGCACGCATACGGTTACCGCAACGCTGGGTAATAACAATACCAGTGATTCGCAGCCGGTAACATTTGTGGCGGACAAAGCCTCGGCTCAGGTTGTCCTGCAGATATCAAAAGATGAGATCACAGGTAATGGCGTCGATAGCGCAACGCTAACTGCAACGGTTAAAGATCAGTTCGACAATGAGGTGAATAATCTTCCGGTAACATTCAGCTCAGCCTCTTCAGGACTCACCCTGACCCCGGGAGTAAGTAATACCAACGAGTCTGGCATCGCGCAGGCCACTCTCGCAGGCGTTGCCTTTGGTGAGAAGACGGTTACTGCATCACTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCCCGCAGAACAGCTCCGGCAGCGTCATCACCGCCACAGTCGTTGATAATAATGGCTTTCCGGTGAAAGGTGTGACTGTGAACTTCACCAGCAACGCAGCGACAGCCGAAATGACGAACGGCGGTCAAGCCGTGACGAACGAACAGGGTAAGGCTACCGTCACTTATACCAATACCCGCTCCTCGATAGAATCAGGAGCGAGACCGGATACCGTTGAGGCCAGTCTGGAAAATGGTAGCTCCACGCTTAGCACATCAATTAATGTCAACGCTGATGCGTCTACGGCACATCTCACCTTGCTACAGGCACTTTTTGATACAGTCTCCGCAGGCGAGACAACCAGTCTGTATATTGAGGTGAAGGATAATTACGGCAACGGTGTCCCCCAGCAGGAGGTAACCCTCAGCGTTTCACCAAGTGAAGGCGTGACCCCCAGTAATAACGCTATATATACTACCAACCACGACGGCAATTTTTACGCAAGCTTTACCGCTACAAAAGCCGGGGTTTATCAATTGACGGCAACCCTCGAAAATGGCGATTCGATGCAACAAACAGTGACCTATGTGCCGAACGTCGCGAATGCTGAAATCACGCTGGCAGCCTCGAAGGATCCGGTGATTGCCGACAATAACGATCTCACGACACTAACAGCAACAGTCGCTGATACAGAGGGCAATGCGATAGCCAACACTGAGGTAACATTTACTCTGCCGGAAGATGTGAAGGCGAACTTCACGCTGAGCGATGGCGGTAAAGTGATTACTGATGCTGAAGGCAAAGCGAAAGTCACGCTGAAAGGTACAAAAGCAGGCGCTCATACTGTTACAGCATCGATGACTGGCGGTAAGAGTGAGCAGTTGGTGGTGAACTTTATTGCGGATACGCTCACTGCGCAGGTTAATCTTAACGTTACCGAGGACAATTTTATCGCTAATAACGTCGGGATGACCAGGCTGCAGGCAACAGTGACTGATGGAAACGGCAACCCGTTAGCCAATGAGGCGGTGACATTCACGCTACCGGCAGATGTGAGCGCAAGCTTTACTCTCGGACAAGGCGGTTCCGCCATTACTGATATCAACGGCAAGGCTGAAGTTACACTGAGCGGTACAAAATCCGGCACCTACCCCGTGACAGTTAGCGTGAACAATTATGGTGTCAGTGATACGAAACAGGTGACTTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTGAAATTCTTGTGACAAGCACCGAGGTCGGACTGAAAACAGTTTCAGCCTCTCTGGCAGATAAACCTACTGAAGTCATCTCGCGATTACTGAATGCCAGTGCAGATGTTAATTCTGCGACGATTACCAGTCTGGAGATACCGGAAGGTCAGGTAATGGTCGCACAAGACGTAGCAGTTAAAGCTCACGTTAACGACCAGTTTGGCAACCCGGTTGCGCATCAACCCGTGACATTCAGTGCAGAGCCATCCTCGCAAATGATCATCAGCCAGAATACGGTCTCTACTAATACGCAGGGTGTAGCCGAGGTCACCATGACGCCCGAAAGAAACGGTTCGTATATGGTGAAAGCATCCCTGCCGAATGGAGCCTCACTTGAGAAACAACTGGAGGCTATTGATGAAAAACTGACACTCACGGCGTCCAGTCCGCTTATCGGTGTCTATGCCCCTACAGGCGCTACTCTGACGGCAACGCTAACCTCTGCAAATGGCACTCCAGTGGAGGGTCAGGTCATCAACTTTAGCGTAACGCCAGAAGGGGCGACGTTAAGTGGCGGAAAAGTGAGAACTAACTCTTCAGGTCAGGCTCCAGTCGTTTTGACCAGCAATAAAGTCGGTACATATACGGTGACTGCATCTTTCCATAACGGCGTAACAATACAGACACAGACAACCGTGAAAGTCACTGGCAACTCAAGCACCGCCCATGTTGCTAGCTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGGCAGTGGTAACCTGATCGAAGGTCTCACTGTGTACTTCGCCTTAAAAAGCGGCTCTGCCACATTAACGTCATTAACAGCGGTGACCGATCAAAACGGAATCGCGACAACAAGCGTGAAAGGAGCGATGACAGGTAGCGTCACGGTAAGCGCAGTCACGACCGCTGGTGGAATGCAAACAGTAGATATAACGCTGGTGGCTGGCCCGGCAGACACCTCGCAGTCCGTCCTTAAGAGCAATCGGTCATCACTGAAAGGGGACTATACCGATAGTGCTGAATTACGTCTTGTTCTGCACGATATATCAGGCAATCCGATCAAAGTTTCTGAAGGGATGGAATTTGTGCAATCAGGTACTAACGTGCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGTCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCGGGGCGTATTATCAGTTGAATAATGACAACTTTGCCCCAGGAAAAACGGCGGCTGATTATGAGTTTTCAAGCTCTGCCTCCTGGGTCGATGTTGATGCTACCGGTAAAGTGACATTTAAAAATGTCGGCAGCAATTCGGAAAGGATTACGGCGACGCCAAAATCAGGAGGCCCTAGCTATGTATACGAAATCCGTGTGAAGAGTTGGTGGGTGAACGCCGGCGAGGCTTTCATGATATACAGCCTTGCTGAAAATTTTTGCAGCAGCAATGGCTACACGCTCCCCAGAGCAAACTATTTAAACCACTGTAGTTCCCGAGGCATCGGGTCACTGTACAGTGAATGGGGAGATATGGGGCATTACACGACTGACGCTGGTTTTCAATCAAATATGTATTGGTCATCTAGTCCCGCAAACTCAAGCGAACAATACGTAGTTTCCCTGGCAACAGGTGATCAAAGCGTATTTGAAAAGCTTGGGTTTGCTTATGCGACATGTTATAAAAACCTGTGA", 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"MATKKRSGEEINDRQILCGMGIKLRRLTAGICLITQLAFPMAAAAQGVVNAATQQPVPAQIAIANANTVPYTLGALESAQSVAERFGISVAELRKLNQFRTFARGFDNVRQGDELDVPAQVSEKKLTPPPGNSSDNLEQQIASTSQQIGSLLAEDMNSEQAANMARGWASSQASGAMTDWLSRFGTARITLGVDEDFSLKNSQFDFLHPWYETPDNLFFSQHTLHRTDERTQINNGLGWRHFTPTWMSGINFFFDHDLSRYHSRAGIGAEYWRDYLKLSSNGYLRLTNWRSAPELDNDYEARPANGWDVRAESWLPAWPHLGGKLVYEQYYGDEVALFDKDDRQSNPHAITAGLNYTPFPLMTFSAEQRQGKQGENDTRFAVDFTWQPGSAMQKQLDPNEVAARRSLAGSRYDLVDRNNNIVLEYRKKELVRLTLTDPVTGKSGEVKSLVSSLQTKYALKGYNVEATALEAAGGKVVTTGKDILVTLPAYRFTSTPETDNTWPIEVTAEDVKGNLSNREQSMVVVQAPTLSQKDSSVSLSTQTLNADSHSTATLTFIAHDAAGNPVVGLVLSTRHEGVQDITLSDWKDNGDGSYTQILTTGAMSGTLTLMPQLNGVDAAKAPAVVNIISVSSSRTHSSIKIDKDRYLSGNPIEVTVELRDENDKPVKEQKQQLNNAVSIDNVKPGVTTDWKETADGVYKATYTAYTKGSGLTAKLLMQNWNEDLHTAGFIIDANPQSAKIATLSASNNGVLANENAANTVSVNVADEGSNPINDHTVTFAVLSGSATSFNNQNTAKTDVNGLATFDLKSSKQEDNTVEVTLENGVKQTLIVSFVGDSSTAQVDLQKSKNEVVADGNDSVTMTATVRDAKGNLLNDVMVTFNVNSAEAKLSQTEVNSHDGIATATLTSLKNGDYRVTASVSSGSQANQQVNFIGDQSTAALTLSVPSGDITVTNTAPQYMTATLQDKNGNPLKDKEITFSVPNDVASKFSISNGGKGMTDSNGVAIASLTGTLAGTHMIMARLANSNVSDAQPMTFVADKDRAVVVLQTSKAEIIGNGVDETTLTATVKDPSNHPVAGITVNFTMPQDVAANFTLENNGIAITQANGEAHVTLKGKKAGTHTVTATLGNNNTSDSQPVTFVADKASAQVVLQISKDEITGNGVDSATLTATVKDQFDNEVNNLPVTFSSASSGLTLTPGVSNTNESGIAQATLAGVAFGEKTVTASLANNGASDNKTVHFIGDTAAAKIIELAPVPDSIIAGTPQNSSGSVITATVVDNNGFPVKGVTVNFTSNAATAEMTNGGQAVTNEQGKATVTYTNTRSSIESGARPDTVEASLENGSSTLSTSINVNADASTAHLTLLQALFDTVSAGETTSLYIEVKDNYGNGVPQQEVTLSVSPSEGVTPSNNAIYTTNHDGNFYASFTATKAGVYQLTATLENGDSMQQTVTYVPNVANAEITLAASKDPVIADNNDLTTLTATVADTEGNAIANTEVTFTLPEDVKANFTLSDGGKVITDAEGKAKVTLKGTKAGAHTVTASMTGGKSEQLVVNFIADTLTAQVNLNVTEDNFIANNVGMTRLQATVTDGNGNPLANEAVTFTLPADVSASFTLGQGGSAITDINGKAEVTLSGTKSGTYPVTVSVNNYGVSDTKQVTLIADAGTAKLASLTSVYSFVVSTTEGATMTASVTDANGNPVEGIKVNFRGTSVTLSSTSVETDDRGFAEILVTSTEVGLKTVSASLADKPTEVISRLLNASADVNSATITSLEIPEGQVMVAQDVAVKAHVNDQFGNPVAHQPVTFSAEPSSQMIISQNTVSTNTQGVAEVTMTPERNGSYMVKASLPNGASLEKQLEAIDEKLTLTASSPLIGVYAPTGATLTATLTSANGTPVEGQVINFSVTPEGATLSGGKVRTNSSGQAPVVLTSNKVGTYTVTASFHNGVTIQTQTTVKVTGNSSTAHVASFIADPSTIAATNTDLSTLKATVEDGSGNLIEGLTVYFALKSGSATLTSLTAVTDQNGIATTSVKGAMTGSVTVSAVTTAGGMQTVDITLVAGPADTSQSVLKSNRSSLKGDYTDSAELRLVLHDISGNPIKVSEGMEFVQSGTNVPYIKISAIDYSLNINGDYKATVTGGGEGIATLIPVLNGVHQAGLSTTIQFTRAEDKIMSGTVSVNGTDLPTTTFPSQGFTGAYYQLNNDNFAPGKTAADYEFSSSASWVDVDATGKVTFKNVGSNSERITATPKSGGPSYVYEIRVKSWWVNAGEAFMIYSLAENFCSSNGYTLPRANYLNHCSSRGIGSLYSEWGDMGHYTTDAGFQSNMYWSSSPANSSEQYVVSLATGDQSVFEKLGFAYATCYKNL", + "protein_translation_length": 2358, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK1975" + ], + [ + "gene_synonym", + "yeeL" + ], + [ + "gene_synonym", + "yeeK" + ], + [ + "gene_synonym", + "ASAP:ABE-0285098" + ], + [ + "gene_synonym", + "b4497" + ], + [ + "gene_synonym", + "ASAP:ABE-0006565" + ], + [ + "gene_synonym", + "GeneID:2847764" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76349" + ], + [ + "gene_synonym", + "EcoGene:EG13380" + ], + [ + "gene_synonym", + "JW5325" + ], + [ + "gene_synonym", + "ASAP:ABE-0006568" + ], + [ + "gene_synonym", + "JW1961" + ] + ], + "dna_sequence": "ATGTTTTTAGCATCATTGTTGAGACGTATTGCATTTAGTTACTACGATTATAAAGCTTATAATTTCAATATTGAAAAAACAGACTTTGTTGTCATCCATATTCCCGATCAGATTGGCGATGCTATGGCCATCTTTCCTGTTATTCGGGCGCTTGAATTGCATAAAATTAAGCATCTTTTAATTGTAACGTCGACAATTAATTTAGAAGTCTTTAATGCGCTTAAACTTGAACAGACTAAATTAACATTAGTCACAATGACTATGCAGGATCACGCAACATTAAAAGAAATAAAAGATTTAGCAAAGAACATAACACAGCAATACGGTACGCCGGATCTTTGCATTGAGGGGATGCGTAAAAAGAACCTGAAAACGATGTTATTTATCAGTCAGTTGAAAGCAAAAACGAATTTTCAGGTTGTTGGTATAACCATGAATTGCTTCTCCCCTTTGTGCAAGAACGCGTCCAGTATGGATCAGAAACTCCGGGCTCCCGTACCTATGACATGGGCATTTATGATGCGTGAGGCGGGTTTTCCAGCAGTCAGGCCAATATATGAATTGCCACTAAGTGAGGATGTACTCGATGAGGTGCGCGAGGAAATGCGATCGTTAGGATCTTACATTGCGTTCAATTTAGAAGGTAGCTCGCAGGAACGTACATTTTCATTATCGATTGCAGAAAATCTAATAGCAAAAATTTAAAGTGAAACAGATATACCAATAGTGATCGTTCATGGACCCAAAGGTGAAGATAAAGCCAGGGCATTAGTGGATTGTTATAATAATGTCTACCGTTTATCCTTACCACCCTCGATTAAACGTTCAGCAGCAATCATAAAAGATGCTTATATCGCAATAACTCCTGACACCTCAATATTACATATGGCAAGTGCCTATAATACCCCTGTTGTTGCAATTTATGCTGATTACAAAACGCGATGGCCCGCAATGGCCGATGTCTCGGAGTCAGTCGTCGTTGGGCAAAAAATTGACAATATAAGTCTGGATGAATTCGCAAAGGCATTAAAAAGTGTTTTGGCGAGAATATGA", + "dna_sequence_length": 1053, + "id": "CDS_1962", + "location": [ + [ + "NC_000913", + 2053328, + "-", + 1053 + ] + ], + "md5": "b3ec2a7c08ccaa5ea01b2b8277a4e05b", + "parent_gene": "", + "protein_md5": "84b51356060b14938d3c6f976e1fdb75", + "protein_translation": "MFLASLLRRIAFSYYDYKAYNFNIEKTDFVVIHIPDQIGDAMAIFPVIRALELHKIKHLLIVTSTINLEVFNALKLEQTKLTLVTMTMQDHATLKEIKDLAKNITQQYGTPDLCIEGMRKKNLKTMLFISQLKAKTNFQVVGITMNCFSPLCKNASSMDQKLRAPVPMTWAFMMREAGFPAVRPIYELPLSEDVLDEVREEMRSLGSYIAFNLEGSSQERTFSLSIAENLIAKI", + "protein_translation_length": 234, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK1976" + ], + [ + "gene_synonym", + "yeeM" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76350" + ], + [ + "gene_synonym", + "EcoGene:EG20205" + ], + [ + "gene_synonym", + "shiA" + ], + [ + "gene_synonym", + "b1981" + ], + [ + "gene_synonym", + "GeneID:946495" + ], + [ + "gene_synonym", + "GI:16129925" + ], + [ + "gene_synonym", + "NP_416488.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0006572" + ], + [ + "gene_synonym", + "JW1962" + ] + ], + "dna_sequence": "ATGGACTCCACGCTCATCTCCACTCGTCCCGATGAAGGGACGCTTTCGTTAAGTCGCGCCCGACGAGCTGCGTTAGGCAGCTTCGCTGGTGCCGTCGTCGACTGGTATGATTTTTTACTCTATGGCATCACCGCCGCACTGGTGTTTAATCGCGAGTTTTTCCCGCAAGTAAGCCCGGCGATGGGAACGCTCGCCGCATTTGCTACCTTTGGCGTCGGATTTCTTTTCCGTCCGCTCGGCGGTGTCATTTTCGGTCACTTTGGCGACCGACTGGGACGTAAGCGCATGTTAATGCTGACCGTCTGGATGATGGGCATCGCGACAGCCTTGATTGGTATTCTTCCTTCATTCTCGACCATTGGGTGGTGGGCACCTATTTTGCTGGTGACACTGCGTGCCATTCAGGGATTTGCAGTCGGCGGCGAATGGGGAGGCGCGGCGTTGCTTTCCGTTGAAAGTGCACCGAAAAATAAAAAAGCCTTTTACAGTAGCGGTGTACAAGTTGGCTACGGTGTAGGTTTACTGCTTTCAACCGGACTGGTTTCATTGATCAGTATGATGACGACTGACGAACAGTTTTTAAGCTGGGGCTGGCGCATTCCTTTCCTGTTTAGCATCGTACTGGTACTGGGAGCATTGTGGGTGCGCAATGGCATGGAGGAGTCCGCGGAATTTGAACAACAGCAACATTATCAAGCTGCCGCGAAAAAACGCATCCCGGTTATCGAAGCGCTGTTACGACATCCCGGTGCTTTCCTGAAGATTATTGCGCTACGACTGTGCGAATTGCTGACGATGTACATCGTTACTGCCTTTGCACTTAATTATTCAACCCAGAATATGGGGCTACCGCGCGAACTTTTCCTTAATATTGGTTTGCTGGTAGGTGGATTAAGCTGCCTGACAATTCCCTGTTTTGCCTGGCTTGCCGATCGTTTTGGTCGCCGTAGGGTTTATATCACAGGTACGTTAATCGGAACGTTGAGCGCATTTCCTTTCTTTATGGCGCTTGAAGCACAATCTATTTTCTGGATAGTTTTCTTCTCCATAATGCTGGCAAACATTGCGCATGACATGGTGGTGTGTGTGCAACAACCGATGTTTACCGAAATGTTTGGTGCCAGTTATCGCTATAGTGGCGCTGGAGTCGGTTATCAGGTTGCCAGTGTGGTTGGCGGTGGATTTACACCTTTTATTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGA", 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"EcoGene:EG10039" + ], + [ + "gene_synonym", + "amn" + ], + [ + "gene_synonym", + "b1982" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE12" + ], + [ + "gene_synonym", + "GeneID:946508" + ], + [ + "gene_synonym", + "GI:16129926" + ], + [ + "gene_synonym", + "JW1963" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "GeneID:946493" + ], + [ + "gene_synonym", + "ECK1978" + ], + [ + "gene_synonym", + "b1983" + ], + [ + "gene_synonym", + "ASAP:ABE-0006582" + ], + [ + "gene_synonym", + "GI:16129927" + ], + [ + "gene_synonym", + "JW1964" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8A2" + ] + ], + "dna_sequence": "GTGGGACGTAAATGGGCCAATATTGTTGCTAAAAAAACGGCTAAAGACGGTGCAACGTCTAAAATTTATGCAAAATTCGGTGTAGAAATCTATGCTGCTGCTAAACAAGGTGAACCCGATCCAGAATTAAACACATCTTTAAAATTCGTTATTGAACGTGCAAAGCAGGCACAAGTTCCAAAGCACGTTATTGATAAAGCAATTGATAAAGCCAAAGGCGGCGGAGATGAAACGTTCGTGCAGGGACGTTATGAAGGCTTTGGTCCTAATGGCTCAATGATTATCGCCGAGACATTGACTTCAAATGTTAACCGTACGATTGCTAACGTTCGCACAATTTTCAATAAAAAAGGCGGCAATATCGGAGCGGCAGGTTCTGTCAGCTATATGTTTGACAATACGGGTGTGATTGTATTTAAAGGGACAGACCCTGACCATATTTTTGAAATTTTACTTGAAGCTGAAGTTGATGTTCGTGATGTGACTGAAGAAGAAGGTAACATTGTTATTTATACTGAACCTACTGACCTTCATAAAGGAATCGCGGCTCTAAAAGCAGCTGGAATCACTGAGTTCTCAACAACAGAATTAGAAATGATTGCTCAATCTGAAGTTGAGCTTTCCCCAGAAGATTTAGAAATCTTTGAAGGGCTTGTTGATGCCCTTGAAGATGACGACGATGTACAAAAAGTTTATCATAACGTCGCAAATCTCTAA", + "dna_sequence_length": 717, + "functions": [ + "UPF0082 family protein" + ], + "id": "CDS_1965", + "location": [ + [ + "NC_000913", + 2056858, + "+", + 717 + ] + ], + "md5": "8573833410cfa7648fb5fffda7d7d9ca", + "parent_gene": "", + "protein_md5": "91f3bc2cc5f1320647f1e1fb1479af44", + "protein_translation": "MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELNTSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSNVNRTIANVRTIFNKKGGNIGAAGSVSYMFDNTGVIVFKGTDPDHIFEILLEAEVDVRDVTEEEGNIVIYTEPTDLHKGIAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKVYHNVANL", + "protein_translation_length": 238, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yeeO" + ], + [ + "gene_synonym", + "ECK1980" + ], + [ + "gene_synonym", + "EcoGene:EG13383" + ], + [ + "gene_synonym", + "NP_416491.2" + ], + [ + "gene_synonym", + "b1985" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76352" + ], + [ + "gene_synonym", + "GeneID:946506" + ], + [ + "gene_synonym", + "JW1965" + ], + [ + "gene_synonym", + "GI:226524727" + ], + [ + "gene_synonym", + "ASAP:ABE-0006586" + ] + ], + "dna_sequence": "ATGTGGTTTCACTTTCTGCAATTAAGGTCGGCTTTGAATATCTCCTCTGCTTTACGCCAGGTTGTTCACGGCACTCGCTGGCACGCTAAACGCAAGAGCTACAAAGTGTTGTTCTGGCGCGAGATAACCCCGCTTGCTGTTCCTATCTTCATGGAGAATGCCTGTGTCCTGTTGATGGGGGTTCTGAGCACTTTTCTGGTCAGCTGGCTGGGAAAAGATGCGATGGCCGGCGTGGGATTGGCGGACAGCTTCAATATGGTCATTATGGCTTTTTTTGCTGCTATCGATCTTGGTACTACTGTCGTTGTGGCATTTAGTCTCGGTAAGCGGGATCGACGACGAGCGAGGGTGGCGACGCGGCAGTCATTGGTGATCATGACGTTGTTTGCCGTACTGTTGGCAACGCTTATTCATCATTTTGGCGAACAAATTATTGATTTCGTCGCGGGTGATGCCACGACAGAAGTTAAAGCACTGGCGTTGACTTATCTGGAGCTGACGGTACTCAGTTATCCAGCAGCTGCCATCACTCTTATTGGTAGCGGGGCACTTCGTGGTGCAGGGAATACGAAAATACCGCTATTGATTAACGGTAGCCTGAATATTCTTAATATTATTATTAGCGGCATATTGATTTACGGCCTTTTCTCCTGGCCGGGACTGGGATTTGTCGGGGCAGGGCTGGGTTTAACCATTTCTCGTTATATTGGCGCAGTTGCAATTTTGTGGGTGCTGGCGATTGGTTTTAATCCTGCGCTAAGGATTTCGTTAAAGAGCTATTTTAAACCGCTGAATTTTAGCATTATCTGGGAAGTCATGGGGATTGGTATTCCCGCGAGTGTCGAATCAGTGTTATTTACCAGTGGTCGGTTATTAACCCAAATGTTCGTTGCCGGGATGGGGACCAGTGTTATTGCCGGAAATTTTATCGCGTTTTCAATTGCGGCTCTTATCAACTTACCCGGAAGTGCGCTCGGCTCTGCTTCTACGATCATTACAGGCCGAAGGTTGGGGGTAGGGCAGATAGCGCAAGCAGAGATTCAGTTGCGGCATGTGTTCTGGCTTTCCACTCTTGGATTAACGGCCATCGCCTGGCTAACGGCTCCCTTTGCCGGGGTTATGGCATCGTTTTACACCCAGGATCCACAGGTTAAACATGTCGTTGTGATTCTGATTTGGCTAAATGCTTTATTTATGCCTATTTGGTCCGCCTCATGGGTGCTACCCGCTGGATTTAAAGGTGCTCGTGATGCCCGTTACGCCATGTGGGTTTCGATGTTGAGCATGTGGGGTTGTCGGGTTGTAGTCGGTTATGTGCTGGGAATCATGCTTGGCTGGGGTGTGGTTGGTGTCTGGATGGGAATGTTTGCCGACTGGGCTGTGCGGGCCGTGCTGTTTTACTGGCGAATGGTTACTGGACGTTGGCTATGGAAATACCCTCGACCCGAGCCGCAAAAGTGTGAAAAAAAGCCAGTTGTGTCGGAATAA", 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"gene_synonym", + "UniProtKB/Swiss-Prot:Q47083" + ], + [ + "gene_synonym", + "GI:16129929" + ], + [ + "gene_synonym", + "b1987" + ], + [ + "gene_synonym", + "EcoGene:EG14264" + ], + [ + "gene_synonym", + "ASAP:ABE-0006590" + ], + [ + "gene_synonym", + "JW1966" + ], + [ + "gene_synonym", + "NP_416492.1" + ], + [ + "gene_synonym", + "GeneID:946502" + ] + ], + "dna_sequence": 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[ + "ssuEADCB/tauABCD operon transcriptional activator" + ], + "id": "CDS_1967", + "location": [ + [ + "NC_000913", + 2060914, + "-", + 951 + ] + ], + "md5": "514e92ee44e837f0e210875566e3ef66", + "parent_gene": "", + "protein_md5": "fef30d4c9e0272bdb7e00d090bbb769b", + "protein_translation": "MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDIKRQVMESSEEEIDYQI", + "protein_translation_length": 316, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "nac" + ], + [ + "gene_synonym", + "GeneID:946501" + ], + [ + "gene_synonym", + "ECK1983" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47005" + ], + [ + "gene_synonym", + "GI:16129930" + ], + [ + "gene_synonym", + "EcoGene:EG14265" + ], + [ + "gene_synonym", + "JW1967" + ], + [ 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regulon transcriptional regulator", + "autorepressor" + ], + "id": "CDS_1968", + "location": [ + [ + "NC_000913", + 2061933, + "-", + 918 + ] + ], + "md5": "c830730a0ecb945edbb2a1166a9a7b5a", + "parent_gene": "", + "protein_md5": "42afa4a741ddc33f47f045646e6cbbb2", + "protein_translation": "MNFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGELNQQLLIRTKRGVTPTDAGKILYTHARAILRQCEQAQLAVHNVGQALSGQVSIGFAPGTAASSITMPLLQAVRAEFPEIVIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQALLKEDLFLVGTQDCPGQSVDVNAIAQMNLFLPSDYSAIRLRVDEAFSLRRLTAKVIGEIESIATLTAAIASGMGVAVLPESAARSLCGAVNGWMSRITTPSMSLSLSLNLPARANLSPQAQAVKELLMSVISSPVMEKRQWQLVS", + "protein_translation_length": 305, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:945273" + ], + [ + "gene_synonym", + "yzzT" + ], + [ + "gene_synonym", + "NP_416494.1" + ], + [ + "gene_synonym", + "yeeG" + ], + [ + "gene_synonym", + "ECK1985" + ], + [ + "gene_synonym", + "b1990" + ], + [ + "gene_synonym", + "GI:16129931" + ], + [ + "gene_synonym", + "EcoGene:EG12682" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39176" + ], + [ + "gene_synonym", + "JW1968" + ], + [ + "gene_synonym", + "ldtA" + ], + [ + "gene_synonym", + "srfK" + ], + [ + "gene_synonym", + "ASAP:ABE-0006607" + ], + [ + "gene_synonym", + "erfK" + ] + ], + "dna_sequence": 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"L,D-transpeptidase linking Lpp to murein" + ], + "id": "CDS_1969", + "location": [ + [ + "NC_000913", + 2063323, + "-", + 933 + ] + ], + "md5": "e4332eda8ff8419705dd7cdfa0dbdcb4", + "parent_gene": "", + "protein_md5": "58dfc7bde3dbaccd9264edaa9f55b6d0", + "protein_translation": "MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "cobT" + ], + [ + "gene_synonym", + "NP_416495.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0006611" + ], + [ + "gene_synonym", + "ECK1986" + ], + [ + "gene_synonym", + "GI:16129932" + ], + [ + "gene_synonym", + "b1991" + ], + [ + "gene_synonym", + "EcoGene:EG12151" + ], + [ + "gene_synonym", + "JW1969" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36562" + ], + [ + "gene_synonym", + "GeneID:946517" + ] + ], + "dna_sequence": 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"MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDKTLESGKVTFFSRTKQRLWTKGETSGNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTSSCFGDTAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALAATVHDRFELTNEASDLMYHLLVLLQDQGLDLTTVIENLRKRHQ", + "protein_translation_length": 203, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76372" + ], + [ + "gene_synonym", + "rol" + ], + [ + "gene_synonym", + "GeneID:946553" + ], + [ + "gene_synonym", + "cld" + ], + [ + "gene_synonym", + "ASAP:ABE-0006731" + ], + [ + "gene_synonym", + "ECK2022" + ], + [ + "gene_synonym", + "b2027" + ], + [ + "gene_synonym", + "wzzB" + ], + [ + "gene_synonym", + "GI:90111375" + ], + [ + "gene_synonym", + "wzz" + ], + [ + "gene_synonym", + "EcoGene:EG13406" + ], + [ + "gene_synonym", + "NP_416531.4" + ], + [ + "gene_synonym", + "JW5836" + ] + ], + "dna_sequence": 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"212492841f5916a32340269f841e509e", + "parent_gene": "", + "protein_md5": "c2d703039bd79e4fea7248224016e5dc", + "protein_translation": "MVYIIIVSHGHEDYIKKLLENLNADDEHYKIIVRDNKDSLLLKQICQHYAGLDYISGGVYGFGHNNNIAVAYVKEKYRPADDDYILFLNPDIIMKHDDLLTYIKYVESKRYAFSTLCLFRDEAKSLHDYSVRKFPVLSDFIVSFMLGINKTKIPKESIYSDTVVDWCAGSFMLVRFSDFVRVNGFDQGYFMYCEDIDLCLRLSLAGVRLHYVPAFHAIHYAHHDNRSFFSKAFRWHLKSTFRYLARKRILSNRNFDRISSVFHP", + "protein_translation_length": 264, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b2030" + ], + [ + "gene_synonym", + "EcoGene:EG40008" + ], + [ + "gene_synonym", + "GeneID:946577" + ], + [ + "gene_synonym", + "GI:16129971" + ], + [ + "gene_synonym", + "insH1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE54" + ], + [ + "gene_synonym", + "NP_416535.1" + ], + [ + "gene_synonym", + "ECK0261" + ], + [ + "gene_synonym", + "ASAP:ABE-0006742" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "GI:16129972" + ], + [ + "gene_synonym", + "ECK2026" + ], + [ + "gene_synonym", + "EcoGene:EG11985" + ], + [ + "gene_synonym", + "b2032" + ], + [ + "gene_synonym", + "ASAP:ABE-0006747" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "NP_416537.1" + ], + [ + "gene_synonym", + "JW2018" + ], + [ + "gene_synonym", + "ECK2027" + ], + [ + "gene_synonym", + "b2033" + ], + [ + "gene_synonym", + "ASAP:ABE-0006749" + ], + [ + "gene_synonym", + "EcoGene:EG11984" + ] + ], + "dna_sequence": "ATGATCTTAAAACTCGCTAAACGATATGGTCTCTGTGGTTTTATTCGGCTTGTTAGAGATGTCTTATTGACTCGTGTATTTTACCGGAACTGTAGAATTATTCGATTTCCCTGCTATATTCGCAATGATGGTAGCATTAATTTTGGTGAAAATTTCACAAGTGGAGTCGGTCTCAGGCTGGATGCATTTGGACGTGGCGTGATTTTTTTTTCCGATAATGTGCAAGTTAACGACTATGTTCATATCGCCTCAATTGAGAGCGTTACGATAGGTCGGGATACGCTTATTGCAAGTAAAGTATTTATTACCGATCATAATCACGGTTCCTTTAAGCACTCTGATCCAATGAGTTCGCCAAATATACCTCCAGACATGCGCACGTTGGAATCTTCAGCTGTTGTAATTGGCCAGAGGGTTTGGTTGGGTGAGAATGTGACGGTTTTGCCTGGAACAATTATTGGTAATGGAGTCGTAGTCGGCGCCAATTCTGTTGTTAGAGGTTCTATTCCCGAAAATACTGTCATTGCGGGAGTACCAGCAAAAATCATAAAGAAATACAATCATGAGACCAAATTATGGGAAAAAGCATAG", + "dna_sequence_length": 591, + "functions": [ + "putative lipopolysaccharide biosynthesis O-acetyl transferase" + ], + "id": 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"dna_sequence_length": 993, + "functions": [ + "d-Galf:alpha-d-Glc beta-1,6-galactofuranosyltransferase" + ], + "id": "CDS_2019", + "location": [ + [ + "NC_000913", + 2106057, + "-", + 993 + ] + ], + "md5": "b9eb0e063a896d6c7066778c0a373c3b", + "parent_gene": "", + "protein_md5": "a7856af340583419477f2ba362e07f5d", + "protein_translation": "MYFLNDLNFSRRDAGFKARKDALDIASDYENISVVNIPLWGGVVQRIISSVKLSTFLCGLENKDVLIFNFPMAKPFWHILSFFHRLLKFRIVPLIHDIDELRGGGGSDSVRLATCDMVISHNPQMTKYLSKYMSQDKIKDIKIFDYLVSSDVEHRDVTDKQRGVIYAGNLSRHKCSFIYTEGCDFTLFGVNYENKDNPKYLGSFDAQSPEKINLPGMQFGLIWDGDSVETCSGAFGDYLKFNNPHKTSLYLSMELPVFIWDKAALADFIVDNRIGYAVGSIKEMQEIVDSMTIETYKQISENTKIISQKIRTGSYFRDVLEEVIDDLKTR", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK2029" + ], + [ + "gene_synonym", + "NP_416539.1" + ], + [ + "gene_synonym", + "yefF" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37748" + ], + [ + "gene_synonym", + "wbbH" + ], + [ + "gene_synonym", + "GI:16129975" + ], + [ + "gene_synonym", + "JW2020" + ], + [ + "gene_synonym", + "rfc" + ], + [ + "gene_synonym", + "EcoGene:EG11982" + ], + [ + "gene_synonym", + "b2035" + ], + [ + "gene_synonym", + "GeneID:945179" + ], + [ + "gene_synonym", + "ASAP:ABE-0006753" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK2032" + ], + [ + "gene_synonym", + "JW2023" + ], + [ + "gene_synonym", + "EcoGene:EG11979" + ], + [ + "gene_synonym", + "rmlC" + ], + [ + "gene_synonym", + "rfbC" + ], + [ + "gene_synonym", + "ASAP:ABE-0006759" + ], + [ + "gene_synonym", + "rfbD" + ], + [ + "gene_synonym", + "GeneID:947482" + ], + [ + "gene_synonym", + "b2038" + ] + ], + "dna_sequence": "ATGAATGTGATTAGAACTGAAATTGAAGATGTGCTAATTCTGGAGCCAAGAGTATTTGGTGATGATAGAGGTTTCTTTTATGAGAGCTTTAATCAATCAGCATTTGAACATATTCTAGGCTATCCGGTCAGCTTTGTTCAAGACAATCACTCACGTTCATCAAAAAATGTACTCAGAGGCCTTCACTTTCAACGCGGCGAGTACGCACAAGATAAACTTGTACGCTGCACTCATGGAGCAGTTTTTGATGTTGCTGTTGATATTCGACCCAATTCGGTATCCTTTGGTAAATGGGTTGGTGTTCTGCTTTCAGCTGATAATAAGCAGCAGTTGTGGATACCAAAAGGGTTTGCTCATGGCTTTTTGGTTCTGTCTGATATCGCTGAATTTCAATATAAAACTACAAACTATTATCATCCTGAAAGCGATTGTGGAATATGTTGGAATGATGAACGCATTGCAATTGATTGGCCCCAAACATCAGGGTTAATCCTTTCGCCAAAAGATGAAAGGCTCTTTACGTTAGATGAGCTTATCAGATTAAAATTAATTGCATGA", + "dna_sequence_length": 558, + "functions": [ + "dTDP-4-deoxyrhamnose-3,5-epimerase" + ], + "id": "CDS_2023", + "location": [ + [ + "NC_000913", + 2110138, + "-", + 558 + ] + ], + "md5": "5c6f5c1b1745c578189a173a3b07c4e2", + "parent_gene": "", + "protein_md5": "9bf85933bdf484f6262ba039af857a65", + "protein_translation": "MNVIRTEIEDVLILEPRVFGDDRGFFYESFNQSAFEHILGYPVSFVQDNHSRSSKNVLRGLHFQRGEYAQDKLVRCTHGAVFDVAVDIRPNSVSFGKWVGVLLSADNKQQLWIPKGFAHGFLVLSDIAEFQYKTTNYYHPESDCGICWNDERIAIDWPQTSGLILSPKDERLFTLDELIRLKLIA", + "protein_translation_length": 185, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37744" + ], + [ + "gene_synonym", + "GeneID:945154" + ], + [ + "gene_synonym", + "GI:16129979" + ], + [ + "gene_synonym", + "ECK2033" + ], + [ + "gene_synonym", + "JW2024" + ], + [ + "gene_synonym", + "som" + ], + [ + "gene_synonym", + "EcoGene:EG11978" + ], + [ + "gene_synonym", + "rmlA" + ], + [ + "gene_synonym", + "rfbA" + ], + [ + "gene_synonym", + "NP_416543.1" + ], + [ + "gene_synonym", + 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"MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16130007" + ], + [ + "gene_synonym", + "b2067" + ], + [ + "gene_synonym", + "ECK2061" + ], + [ + "gene_synonym", + "yegE" + ], + [ + "gene_synonym", + "ASAP:ABE-0006845" + ], + [ + "gene_synonym", + "JW2052" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38097" + ], + [ + "gene_synonym", + "NP_416571.1" + ], + [ + "gene_synonym", + "EcoGene:EG12396" + ], + [ + "gene_synonym", + "GeneID:946600" + ] + ], + "dna_sequence": 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"MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFAIN", 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"b2070" + ], + [ + "gene_synonym", + "ASAP:ABE-0006858" + ], + [ + "gene_synonym", + "NP_416574.1" + ], + [ + "gene_synonym", + "JW2055" + ], + [ + "gene_synonym", + "EcoGene:EG14052" + ], + [ + "gene_synonym", + "GeneID:947159" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76393" + ] + ], + "dna_sequence": "ATGAAAACAAATATAAAAGTATTTACATCGACAGGTGAATTGACCACTCTTGGCCGTGAACTGGGCAAAGGTGGTGAAGGCGCGGTTTATGATATCGAGGAGTTTGTCGATAGCGTCGCCAAGATTTATCACACGCCGCCACCCGCCTTAAAACAGGACAAACTTGCCTTTATGGCTGCGACAGCTGACGCGCAGTTGTTGAATTATGTCGCCTGGCCGCAGGCAACGCTTCACGGTGGACGAGGCGGAAAAGTTATCGGTTTTATGATGCCAAAAGTTTCTGGTAAAGAACCGATTCATATGATCTATAGCCCGGCACATCGTCGCCAGAGTTACCCTCATTGTGCGTGGGATTTTCTACTCTATGTTGCGCGCAATATTGCTTCATCTTTTGCTACGGTTCACGAGCACGGGCACGTCGTGGGTGACGTAAACCAGAACAGTTTTATGGTAGGTCGCGACAGCAAAGTGGTACTGATTGATAGCGACTCCTTTCAAATTAACGCCAATGGCACACTGCATTTATGCGAAGTCGGCGTGTCGCATTTTACGCCGCCAGAGCTACAAACCTTGCCATCATTTGTCGGTTTTGAACGCACAGAAAATCACGATAATTTTGGCCTTGCGTTGCTAATTTTTCACGTCTTGTTTGGTGGGCGGCATCCTTATTCTGGTGTGCCGCTTATCTCTGATGCGGGTAATGCGCTGGAGACGGATATTACCCATTTCCGTTATGCCTACGCGTCAGATAATCAGCGACGTGGTTTAAAACCGCCGCCACGATCTATTCCGCTATCGATGTTACCGAGTGATGTTGAAGCCATGTTTCAGCAGGCATTCACGGAAAGTGGCGTGGCAACCGGGCGTCCGACGGCTAAAGCGTGGGTAGCGGCACTGGACTCTCTACGCCAACAGTTAAAGAAATGTATCGTTTCAGCAATGCATGTTTACCCCGCTCATTTGACTGACTGCCCGTGGTGTGCGCTGGATAATCAAGGTGTTATCTATTTTATTGATCTCGGCGAAGAGGTCATTACCACCGGCGGGAATTTTGTGCTGGCGAAAGTCTGGGCGATGGTGATGGCGTCAGTAGCACCGCCAGCATTGCAACTGCCATTACCCGATCATTTCCAACCGACTGGCAGGCCGCTTCCTTTAGGCCTGTTACGGCGCGAATACATCATTCTGCTTGAGATCGCACTGTCAGCATTATCGCTGCTGCTTTGCGGCCTTCAGGCAGAACCGCGTTATATTATTTTGGTTCCTGTGCTGGCGGCTATCTGGATTATTGGCAGTCTGACAAGCAAAGCGTACAAAGCAGAAGTTCAGCAACGCCGTGAGGCATTTAATCGTGCGAAAATGGACTATGACCATTTAGTCCGCCAGATCCAGCAGGTAGGCGGCCTGGAAGGTTTTATCGCCAAACGGACGATGCTCGAAAAAATGAAGGACGAAATTCTCGGGTTACCGGAAGAAGAGAAACGCGCTCTGGCAGCACTTCATGACACTGCAAGGGAACGGCAGAAGCAGAAGTTTCTGGAGGGATTTTTTATTGATGTTGCCTCTATTCCCGGCGTTGGCCCTGCGCGTAAAGCGGCGTTACGGTCTTTTGGTATTGAAACAGCCGCAGATGTTACCCGTCGTGGCGTTAAGCAAGTGAAAGGGTTTGGCGACCATCTGACCCAGGCGGTTATCGACTGGAAAGCGAGCTGTGAACGCCGTTTTGTGTTCAGGCCGAATGAAGCGATAACGCCAGCAGACAGACAAGCGGTAATGGCGAAAATGACCGCCAAACGACATCGGCTGGAATCGGCGTTGACAGTCGGCGCGACAGAGTTGCAGCGATTCCGCCTTCATGCTCCAGCACGGACCATGCCGTTGATGGAACCGTTACGTCAGGCAGCAGAAAAACTGGCTCAGGCGCAGGCAGATTTAAGCCGCTGCTGA", 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"gene_synonym", + "b2071" + ], + [ + "gene_synonym", + "EcoGene:EG14053" + ], + [ + "gene_synonym", + "GeneID:947201" + ], + [ + "gene_synonym", + "ASAP:ABE-0006863" + ] + ], + "dna_sequence": "ATGAAAAAGATATTACTTATGTTGAGTCTGCTATTTTTTACTACCGCGGGCTTTAGTGAAGTTTCGGATACGTTAGTGACGGGAGGTTATGATAAACAAGCGATGTCTGACGCGATTAAACATGCGCGGAAAGAAACCGATAAATTCATCGAGGTTATGAATAAAAAAGATGCCGATACTTTCGCAGTCAAAGCCCCGATAACCGATCACGGAAGAACCGAGCATTTCTGGCTTACGGATGTCACTTATTCTAACGGCATGTTTATTGGCGTAATCAGCAATGACCCTGGTATTGTTACAAACGTAGAATATGGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGATGTATACGCGCGGGGATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAA", + "dna_sequence_length": 462, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2056", + "location": [ + [ + "NC_000913", + 2151185, + "+", + 462 + ] + ], + "md5": "1018bde5bccf4ef99069441836d9f8f2", + "parent_gene": "", + "protein_md5": "46a93d64cffcd850934b14e69b2d5f30", + "protein_translation": "MKKILLMLSLLFFTTAGFSEVSDTLVTGGYDKQAMSDAIKHARKETDKFIEVMNKKDADTFAVKAPITDHGRTEHFWLTDVTYSNGMFIGVISNDPGIVTNVEYGQEWKIKKEDISDWMYTRGDKIYGGYTIDPLLVTYPKEEADELRAKLVR", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK2066" + ], + [ + "gene_synonym", + "GI:16130012" + ], + [ + "gene_synonym", + "yegK" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76395" + ], + [ + "gene_synonym", + "JW2057" + ], + [ + "gene_synonym", + "b2072" + ], + [ + "gene_synonym", + "GeneID:947269" + ], + [ + "gene_synonym", + "ASAP:ABE-0006865" + ], + [ + "gene_synonym", + "NP_416576.1" + ], + [ + "gene_synonym", + "EcoGene:EG14054" + ] + ], + "dna_sequence": 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"aliases": [ + [ + "gene_synonym", + "b2083" + ], + [ + "gene_synonym", + "GeneID:949050" + ], + [ + "gene_synonym", + "ECK2080" + ], + [ + "gene_synonym", + "EcoGene:EG14309" + ], + [ + "gene_synonym", + "ASAP:ABE-0006896" + ], + [ + "gene_synonym", + "yegZ" + ], + [ + "gene_synonym", + "JW5886" + ] + ], + "dna_sequence": "GTAGCAGAGTTCTCCATCAGCCTGGCTACCGGTCGGGCAGATATTTACACGGAAACACCGGTCAAAGTGTCTGGCTTTAAGCGCGTCATAGACGAGCAGGACTGGACAATCACTAAGGTGACACATTTTCTGAATAATAGCGGCTTCACGACGTCATTAGAGCTTGAGGTCAGGCTTTCTGATGTGGGGTACGAAACAGAAGATAATGAGTGA", + "dna_sequence_length": 213, + "id": "CDS_2070", + "location": [ + [ + "NC_000913", + 2167814, + "-", + 213 + ] + ], + "md5": "3e954bfb30c6bb3aecc6b6c484f3d8d5", + "parent_gene": "", + "protein_md5": "3480ee396a72e2051929f6213358bd41", + "protein_translation": "VAEFSISLATGRADIYTETPVKVSGFKRVIDEQDWTITKVTHFLNNSGFTTSLELEVRLSDVGYETEDNE", + "protein_translation_length": 70, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_416589.2" + ], + [ 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"gene_synonym", + "ASAP:ABE-0006987" + ], + [ + "gene_synonym", + "GI:90111388" + ], + [ + "gene_synonym", + "NP_416616.4" + ], + [ + "gene_synonym", + "apbC" + ], + [ + "gene_synonym", + "b2113" + ], + [ + "gene_synonym", + "JW2100" + ] + ], + "dna_sequence": 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2203972, + "+", + 318 + ] + ], + "md5": "5a46d1b4df1eeeb900a6592c28f8ee46", + "parent_gene": "", + "protein_md5": "f20a454183135a492393ec3dfe4801da", + "protein_translation": "MIVQKELVAIYDYEVPVPEDPFSFRLEIHKCSELFTGSVYRLERFRLRPTFHQRDREDADPLINDALIYIRDECIDERKLRGESPETVIAIFNRELQNIFNQEIE", + "protein_translation_length": 105, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW5349" + ], + [ + "gene_synonym", + "EcoGene:EG11998" + ], + [ + "gene_synonym", + "ECK2111" + ], + [ + "gene_synonym", + "yehL" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33348" + ], + [ + "gene_synonym", + "NP_416623.2" + ], + [ + "gene_synonym", + "GI:90111389" + ], + [ + "gene_synonym", + "GeneID:946656" + ], + [ + "gene_synonym", + "b2119" + ], + [ + "gene_synonym", + "ASAP:ABE-0007006" + ] + ], + "dna_sequence": 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"NP_416625.1" + ], + [ + "gene_synonym", + "ECK2113" + ], + [ + "gene_synonym", + "JW5350" + ], + [ + "gene_synonym", + "yehP" + ], + [ + "gene_synonym", + "ASAP:ABE-0007013" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33352" + ], + [ + "gene_synonym", + "GeneID:946652" + ] + ], + "dna_sequence": "ATGTCTGAACTGAACGATCTTCTGACCACCCGTGAGCTACAACGCTGGCGATTAATTCTTGGCGAAGCGGCAGAAACGACGCTTTGTGGGCTGGATGACAACGCCCGGCAGATAGACCACGCGCTGGAGTGGCTGTATGGGCGCGATCCTGAACGGCTCCAGCGTGGTGAACGTTCCGGTGGATTAGGTGGCTCAAATCTCACCACCCCTGAGTGGATCAACAGTATTCACACGCTGTTTCCGCAGCAGGTGATTGAGCGGCTGGAAAGCGATGCCGTGCTGCGCTACGGCATTGAAGATGTGGTGACGAATCTCGACGTGCTGGAACGTATGCAGCCTTCTGAAAGCCTGCTACGCGCTGTTTTGCACACCAAACATCTGATGAACCCCGAAGTACTGGCTGCCGCCCGCCGGATAGTGTGCCAGGTTGTTGAAGAAATTATGGCTCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACTCTGCGCGCCAACCTGCAACACTGGCACCCGCAACACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGA", 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"ASAP:ABE-0007015" + ], + [ + "gene_synonym", + "yehQ" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33353" + ], + [ + "gene_synonym", + "JW2110" + ] + ], + "dna_sequence": "ATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTGTTAAGCGCAGTCTTAAGGAACTGGAAAATGGCAACGTCCCGGAGATCAGCCATGAGAACGACGCTTTAATCGCCACCTTCAGTGACGGTGTCCGTACCCAGCTGGCGAACGGCCAGGCACTGAAAGAGGCTCAGTGCAGTTGCGGGGCCAACGGTATGTGCCGTCATCGCGTGATGCTGGTGTTAAGTTATCAACGACTTTGTGCCACCACTCAGTCTACGGAAAAAGAAGAAGAGTGGGATCCGGCAATCTGGCTGGAAGAACTGGCTACCCTTCCCGATGCTACCCGCAAACGCGCACAGGCGCTGGTCGCTAAAGGCATCACCATTGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACGTCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCGCTGGGTGAGTGAATCGCTACGGCAACTGCGCGCCAGCGTTGATGCCTTCCACGCCCGCGCCAGCCACTATAATGCCGGAGAATGCTTACATCAGCTTGCGGCATTAAACAGTCGATTAAATTGCGCACAAGAGATGGCCCGGCGCGACAGTATTGGTGAAGTTCCTCCTGTGCCGTGGCGCACGGTCGTTGGCTCTGGCATTGCCGGAGAAGCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTACCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCTGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGGCCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATGCGCAGGTCATTAGCGGCGAAGGGGAAGATAATGTGCTGACGTTATCATTACCAGCCTCAGCCAGCGCACCTTATGCCGTTGAACGCATGGCGGCGCTTTTGCAACAAACAGACGACCCCGTGTGTCTGGTTTCTGGCTTTGTCAGTTTTGTTGAAGGGCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGGCGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACGGGTAGAAGCAATGAATAACGGTGTTTTGCTTTGCGAACAATTATTCCCCATGCTTCAGCAACAAGGATGA", 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], + [ + "gene_synonym", + "EcoGene:EG12004" + ], + [ + "gene_synonym", + "b2123" + ], + [ + "gene_synonym", + "ECK2115" + ], + [ + "gene_synonym", + "JW5351" + ], + [ + "gene_synonym", + "yehR" + ], + [ + "gene_synonym", + "ASAP:ABE-0007018" + ], + [ + "gene_synonym", + "NP_416627.2" + ], + [ + "gene_synonym", + "GI:90111391" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33354" + ] + ], + "dna_sequence": "ATGAAGGCTTTCAATAAGCTGTTTTCCCTCGTTGTTGCATCTGTTCTGGTTTTCTCTCTTGCTGGCTGCGGTGACAAAGAAGAATCGAAGAAATTCAGCGCCAATCTGAACGGCACTGAAATTGCCATTACCTATGTCTACAAAGGTGACAAGGTGCTTAAGCAATCTTCTGAAACCAAAATTCAATTTGCCTCCATTGGTGCAACCACCAAAGAAGATGCTGCCAAGACACTTGAGCCGTTAAGCGCCAAATACAAAAACATCGCGGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTCTGCTGAAGATGCCAAAAAAGGTATCACTATGGCGCAAATGGAACTGGTGATGAAAGCCGCTGGTTTTAAAGAAGTGAAATAA", + "dna_sequence_length": 462, + "functions": [ + "lipoprotein, DUF1307 family" + ], + "id": "CDS_2107", + "location": [ 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}, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG12006" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFT5" + ], + [ + "gene_synonym", + "JW5352" + ], + [ + "gene_synonym", + "ECK2117" + ], + [ + "gene_synonym", + "ASAP:ABE-0007023" + ], + [ + "gene_synonym", + "yehT" + ], + [ + "gene_synonym", + "GeneID:949024" + ], + [ + "gene_synonym", + "b2125" + ], + [ + "gene_synonym", + "GI:90111392" + ], + [ + "gene_synonym", + "NP_416629.4" + ] + ], + "dna_sequence": "ATGATTAAAGTCTTAATTGTCGATGATGAACCGTTAGCACGGGAGAACCTGCGTGTATTTTTGCAGGAGCAGAGCGATATTGAAATCGTTGGAGAGTGTTCAAACGCCGTGGAAGGGATCGGCGCGGTGCATAAACTGCGCCCGGATGTGCTGTTTCTCGATATCCAGATGCCGCGCATCAGTGGTCTGGAAATGGTGGGGATGCTTGACCCGGAACATCGCCCGTATATTGTTTTTCTCACTGCGTTTGACGAATACGCAATTAAAGCCTTTGAAGAACATGCCTTTGATTATCTGCTGAAGCCAATTGATGAAGCGCGACTGGAGAAAACGCTGGCGCGATTGCGTCAGGAGCGCAGCAAGCAGGATGTTTCGCTGTTACCGGAAAATCAACAGGCGCTGAAATTTATCCCTTGTACGGGGCATAGTCGGATTTATTTGCTGCAAATGAAAGATGTGGCATTTGTCAGCAGTCGGATGAGCGGTGTCTACGTTACCAGCCACGAAGGGAAAGAGGGCTTTACCGAATTGACATTACGTACCCTGGAAAGTCGTACACCACTACTGCGCTGCCATCGTCAGTATCTGGTTAACCTCGCGCATTTACAGGAGATTCGTCTGGAAGATAACGGCCAGGCCGAGTTGATTTTGCGTAATGGCTTAACCGTGCCGGTCAGCCGCCGTTATCTGAAAAGCTTAAAAGAGGCGATTGGCCTGTAA", + "dna_sequence_length": 720, + "functions": [ + "putative response regulator in two-component system withYehU" + ], + "id": "CDS_2109", + "location": [ + [ + "NC_000913", + 2212962, + "-", + 720 + ] + ], + "md5": "515a48430e170f2e76023854b9c5f83a", + "parent_gene": "", + 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"ASAP:ABE-0007048" + ], + [ + "gene_synonym", + "NP_416637.1" + ], + [ + "gene_synonym", + "EcoGene:EG10231" + ], + [ + "gene_synonym", + "ECK2126" + ], + [ + "gene_synonym", + "JW2121" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06149" + ], + [ + "gene_synonym", + "GeneID:946653" + ] + ], + "dna_sequence": 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"ATGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCAGCCGCTACCACCGCTTCACAACCGGAAATTGCCTCCGGTAGCGCGATGATTGTTGATCTGAATACCAACAAAGTGATCTATTCGAACCACCCGGATCTGGTGCGTCCGATTGCGTCTATCAGCAAATTAATGACCGCGATGGTTGTGCTGGATGCACGACTGCCGCTGGATGAAAAACTAAAAGTGGATATCAGCCAGACGCCGGAGATGAAAGGGGTCTATTCGCGCGTACGACTGAATAGCGAAATCAGCCGTAAAGATATGCTGTTGCTGGCGCTGATGTCTTCAGAAAACCGCGCGGCGGCAAGCCTTGCGCACCATTATCCCGGTGGTTACAAAGCCTTTATTAAGGCAATGAATGCGAAAGCGAAATCGCTCGGAATGAACAACACGCGCTTTGTTGAACCTACCGGATTGTCGGTGCATAACGTTTCAACTGCCCGTGACTTAACCAAACTGCTCATTGCCAGCAAACAATATCCGTTGATCGGGCAGTTAAGTACTACCCGGGAAGATATGGCAACCTTCTCTAATCCGACGTATACGCTGCCGTTCCGCAATACTAATCATCTGGTGTATCGCGATAACTGGAATATTCAGTTAACCAAAACCGGCTTTACCAATGCGGCGGGCCATTGTCTGGTGATGCGTACGGTTATCAATAATAAACCGGTGGCGCTGGTAGTGATGGACGCGTTTGGCAAATATACCCATTTTGCCGATGCCAGCCGCCTGCGTACCTGGATTGAAACCGGTAAAGTGATGCCTGTGCCGGCAGCAGCGTTGAGCTATAAAAAACAAAAAGCCGCCCAAATGGCGGCGGCGGGGCAGACGGCACAGAACGATTAA", + "dna_sequence_length": 933, + "functions": [ + "D-alanyl-D-alanine endopeptidase" + ], + "id": "CDS_2119", + "location": [ + [ + "NC_000913", + 2224870, + "-", + 933 + ] + ], + "md5": "2f0b1b300a0182ab280e26278f228b64", + "parent_gene": "", + "protein_md5": "bd4a08d67c52714fec8b4e9aec6326ef", + "protein_translation": "MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTWIETGKVMPVPAAALSYKKQKAAQMAAAGQTAQND", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007053" + ], + [ + "gene_synonym", + "NP_416639.2" + ], + [ + "gene_synonym", + "GeneID:946666" + ], + [ + "gene_synonym", + "JW5356" + ], + [ + "gene_synonym", + "yohC" + ], + [ + "gene_synonym", + "b2135" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD17" + ], + [ + "gene_synonym", + "EcoGene:EG12016" + ], + [ + "gene_synonym", + "GI:90111394" + ], + [ + "gene_synonym", + "ECK2128" + ] + ], + "dna_sequence": "ATGAGCCATGTCTGGGGACTGTTTTCCCATCCCGATCGTGAAATGCAGGTGATTAATCGCGAAAACGAAACGATTTCTCACCATTACACCCACCACGTTTTGCTGATGGCGGCGATTCCGGTGATTTGCGCCTTCATTGGCACTACACAGATTGGCTGGAATTTTGGCGATGGCACTATCCTGAAGTTATCCTGGTTTACCGGACTGGCGCTGGCTGTCTTGTTTTACGGCGTTATGCTGGCTGGGGTCGCGGTGATGGGGCGGGTCATCTGGTGGATGGCGCGTAATTATCCGCAGCGTCCGTCACTTGCGCACTGCATGGTCTTCGCGGGCTACGTTGCAACTCCGCTGTTTTTAAGCGGTCTGGTGGCGCTTTATCCACTGGTCTGGTTGTGTGCGCTGGTCGGCACGGTGGCGCTGTTTTACACCGGCTACCTGCTTTACCTTGGTATTCCGAGCTTCCTGAATATCAACAAAGAGGAAGGCCTTAGCTTCTCTAGTTCGACGCTGGCGATTGGCGTGCTGGTACTGGAAGTGCTGCTCGCCCTAACCGTTATACTATGGGGCTACGGTTATCGTTTGTTCTAG", + "dna_sequence_length": 588, + "functions": [ + "Yip1 family inner membrane protein" + ], + "id": "CDS_2120", + "location": [ + [ + "NC_000913", + 2225631, + "-", + 588 + ] + ], + "md5": "9046e20e1756807ab62c254bed7c1f7f", + "parent_gene": "", + "protein_md5": "dacf8958b65df1f1a5cefd58154fc07b", + "protein_translation": "MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF", + "protein_translation_length": 195, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG12017" + ], + [ + "gene_synonym", + "GeneID:946661" + ], + [ + "gene_synonym", + "ASAP:ABE-0007059" + ], + [ + "gene_synonym", + "yohD" + ], + [ + "gene_synonym", + "b2136" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33366" + ], + [ + "gene_synonym", + "JW2124" + ], + [ + "gene_synonym", + "GI:90111395" + ], + [ + "gene_synonym", + "ECK2129" + ], + [ + "gene_synonym", + "NP_416640.2" + ] + ], + "dna_sequence": "ATGGATCTCAATACACTTATCTCACAATATGGTTATGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGAAACCGTGACTTTGCTGGGAGGCGTTGCGGCGCATCAGGGGCTATTAAAGTTCCCGCTGGTGGTACTTTCTGTGGCGCTTGGCGGCATGATTGGCGACCAGGTGCTCTATCTGTGCGGGCGGCGGTTTGGCGGCAAGCTGTTACGCCGTTTCTCGAAACATCAGGATAAAATTGAGCGGGCGCAGAAACTTATCCAACGCCATCCGTATCTGTTTGTCATTGGTACGCGCTTTATGTATGGCTTTCGGGTGATTGGCCCGACGCTGATTGGTGCCAGCCAGCTGCCGCCGAAAATCTTTCTGCCGCTGAATATTCTCGGCGCATTTGCCTGGGCGTTGATTTTTACCACTATTGGTTACGCTGGTGGTCAGGTGATTGCGCCGTGGTTGCACAATCTCGACCAGCATTTGAAGCACTGGGTCTGGTTGATTCTGGTCGTGGTTCTGGTGGTGGGCGTGCGCTGGTGGCTGAAACGACGCGGGAAGAAAAAGCCGGATCATCAGGCGTAA", + "dna_sequence_length": 579, + "functions": [ + "DedA family inner membrane protein" + ], + "id": "CDS_2121", + "location": [ + [ + "NC_000913", + 2225801, + "+", + 579 + ] + ], + "md5": "a034adac4ad03b1595f0eb2a0c581a86", + "parent_gene": "", + "protein_md5": "bd746f031ac35e4941f4f42ebd2ec376", + "protein_translation": "MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHLKHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA", + "protein_translation_length": 192, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:949126" + ], + [ + "gene_synonym", + "GI:16130075" + ], + [ + "gene_synonym", + "EcoGene:EG12019" + ], + [ + "gene_synonym", + "yohE" + ], + [ + "gene_synonym", + "b2137" + ], + [ + "gene_synonym", + "ECK2130" + ], + [ + "gene_synonym", + "yohF" + ], + [ + "gene_synonym", + "JW2125" + ], + [ + "gene_synonym", + "NP_416641.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33368" + ], + [ + "gene_synonym", + "ASAP:ABE-0007062" + ] + ], + "dna_sequence": "ATGGCACAGGTTGCGATTATTACCGCCTCCGATTCGGGGATCGGCAAAGAGTGCGCGTTATTACTGGCGCAGCAGGGGTTTGATATTGGTATTACCTGGCACTCAGATGAAGAAGGGGCAAAAGATACCGCGCGTGAGGTAGTTAGCCACGGCGTACGTGCGGAGATCGTGCAGCTGGATCTCGGCAATCTACCAGAAGGGGCACTGGCGCTGGAGAAACTCATTCAACGGCTGGGGCGCATTGATGTGCTGGTGAATAATGCGGGTGCAATGACCAAAGCGCCGTTTCTTGATATGGCTTTTGATGAGTGGCGCAAGATTTTTACCGTTGATGTCGATGGTGCATTCTTATGCTCGCAAATTGCGGCTCGTCAGATGGTGAAACAAGGGCAGGGCGGTCGCATCATCAACATTACGTCGGTACATGAACATACGCCGCTGCCGGATGCCAGCGCCTACACAGCCGCTAAACATGCGCTCGGTGGGTTAACCAAAGCGATGGCGCTGGAGCTGGTCAGGCATAAGATTTTGGTGAACGCAGTCGCGCCTGGGGCGATCGCCACGCCAATGAATGGCATGGATGACAGCGACGTGAAGCCCGACGCGGAGCCTTCGATTCCCTTGCGGCGTTTTGGCGCAACGCATGAGATTGCCAGCCTGGTGGTGTGGCTTTGTTCGGAGGGCGCAAATTACACCACCGGGCAGTCGTTGATAGTGGATGGCGGCTTTATGTTGGCGAATCCACAGTTCAACCCAGAATAG", + "dna_sequence_length": 762, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_2122", + "location": [ + [ + "NC_000913", + 2227270, + "-", + 762 + ] + ], + "md5": "0c9644b17bfa236d0516c27bcb918c26", + "parent_gene": "", 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"ATGAATCGTGATTCCTTTTATCCAGCCATCGCCTGTTTTCCGCTGTTACTGATGCTGGCCGGGTGTGCGCCTATGCATGAAACCCGCCAGGCGTTAAGCCAGCAAACGCCCGCTGCACAAGTTGACACCGCATTACCCACGGCGCTGAAAAATGGTTGGCCAGACAGCCAATGGTGGCTGGAGTATCACGATAATCAACTCACTTCCTTAATTAACAATGCACTACAGAACGCACCGGATATGCAGGTGGCTGAACAGCGCATTCAGCTAGCTGAAGCCCAGGCGAAGGCAGTTGCCACTCAGGATGGTCCGCAGATCGACTTTTCGGCGGATATGGAGCGGCAAAAAATGTCGGCAGAAGGCTTAATGGGGCCGTTTGCTCTGAACGATCCGGCCGCAGGTACGACCGGCCCGTGGTACACCAACGGTACTTTTGGCTTAACGGCGGGCTGGCATCTCGATATCTGGGGAAAGAATCGGGCGGAGGTTACTGCCCGCCTGGGTACGGTTAAAGCACGGGCGGCGGAACGCGAGCAAACCCGCCAATTGCTGGCTGGCAGCGTAGCCCGCCTGTACTGGGAGTGGCAAACCCAGGCGGCGTTAAACACGGTCTTGCAGCAAATAGAAAAAGAGCAGAACACCATTATCGCGACCGATCGCCAGCTATATCAGAACGGGATTACTTCTTCAGTTGAAGGTGTGGAAACCGATATTAATGCCAGCAAAACCCGGCAGCAGCTCAACGATGTCGCGGGGAAAATGAAAATTATTGAGGCACGGTTAAGCGCACTTACAAATAACCAGACAAAGTCATTGAAGCTTAAACCGGTCGCGTTGCCGAAAGTGGCAAGCCAGCTTCCTGATGAACTGGGGTACTCCTTACTGGCCCGGCGGGCAGATTTGCAGGCGGCGCACTGGTACGTTGAGTCATCGCTAAGCACCATTGATGCGGCAAAAGCGGCATTTTATCCTGACATCAACCTGATGGCCTTCCTGCAACAGGATGCGTTGCACTTAAGCGATCTGTTCCGTCATTCCGCGCAGCAAATGGGCGTTACGGCAGGCCTGACGCTACCCATTTTCGATAGTGGTCGTCTTAACGCCAATCTCGATATCGCAAAAGCCGAAAGCAACTTGTCTATCGCCAGCTACAACAAAGCGGTGGTTGAAGCGGTGAATGACGTGGCGCGGGCAGCCAGTCAGGTTCAGACACTGGCGGAGAAAAACCAGCATCAGGCGCAAATTGAGCGCGATGCCTTGCGTGTGGTAGGTCTTGCGCAGGCGCGCTTTAACGCGGGCATCATTGCTGGTTCCCGCGTCAGCGAAGCCAGAATCCCCGCGCTGCGTGAGCGGGCCAATGGCCTGTTATTGCAAGGGCAGTGGCTGGATGCCTCCATTCAACTCACTGGTGCGTTGGGCGGGGGGTACAAACGCTGA", 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"gene_synonym", + "ASAP:ABE-0007103" + ], + [ + "gene_synonym", + "JW2136" + ], + [ + "gene_synonym", + "EcoGene:EG10592" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAG8" + ], + [ + "gene_synonym", + "ECK2142" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16130088" + ], + [ + "gene_synonym", + "NP_416655.1" + ], + [ + "gene_synonym", + "GeneID:949041" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEE5" + ], + [ + "gene_synonym", + "JW2137" + ], + [ + "gene_synonym", + "EcoGene:EG10593" + ], + [ + "gene_synonym", + "ASAP:ABE-0007108" + ], + [ + "gene_synonym", + "ECK2143" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P25748" + ], + [ + "gene_synonym", + "ASAP:ABE-0007110" + ], + [ + "gene_synonym", + "JW2138" + ], + [ + "gene_synonym", + "EcoGene:EG10365" + ], + [ + "gene_synonym", + "NP_416656.1" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:949044" + ], + [ + "gene_synonym", + "GI:16130090" + ], + [ + "gene_synonym", + "NP_416657.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0007115" + ], + [ + "gene_synonym", + "JW2139" + ], + [ + "gene_synonym", + "yeiB" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25747" + ] + ], + "dna_sequence": 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I" + ], + "id": "CDS_2138", + "location": [ + [ + "NC_000913", + 2243652, + "-", + 669 + ] + ], + "md5": "ab4f70f71144a02d1b8f7c419c262afe", + "parent_gene": "", + "protein_md5": "2c242910cb3cdf4137502dac1ebc7215", + "protein_translation": "MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHMTEIMQLLNLDLADDSLMETPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILIALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAVRHHN", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK2147" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33018" + ], + [ + "gene_synonym", + "b2154" + ], + [ + "gene_synonym", + "JW2141" + ], + [ + "gene_synonym", + "yeiG" + ], + [ + "gene_synonym", + "GI:16130092" + ], + [ + "gene_synonym", + "EcoGene:EG12026" + ], + [ + "gene_synonym", + "ASAP:ABE-0007124" + ], + [ + "gene_synonym", + "NP_416659.1" + ], + [ + "gene_synonym", + "GeneID:949045" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_416660.1" + ] + ], + "dna_sequence": "ATGTTTAGGTTGAACCCTTTCGTACGGGTCGGGCTGTGTTTGTCCGCTATTTCTTGTGCATGGCCTGTGTTAGCGGTCGATGATGATGGCGAAACGATGGTTGTCACTGCATCTTCCGTGGAACAAAATCTTAAAGATGCACCTGCCAGTATCAGCGTCATTACCCAGGAAGACCTGCAGCGAAAACCGGTACAGAATCTGAAGGATGTCCTCAAAGAAGTGCCTGGCGTACAACTGACGAACGAAGGGGATAACCGTAAGGGCGTTAGTATTCGTGGTCTGGACAGCAGCTATACCCTGATTCTCGTCGACGGTAAACGCGTGAACTCCCGCAATGCCGTCTTCCGCCACAATGATTTCGATCTGAACTGGATCCCGGTCGATTCCATCGAACGTATTGAAGTGGTCCGTGGCCCGATGTCGTCGCTGTACGGTTCCGATGCGCTCGGCGGTGTAGTGAATATCATCACCAAAAAAATCGGTCAGAAATGGTCGGGTACCGTTACCGTCGATACCACCATTCAGGAACATCGCGATCGCGGTGACACCTATAACGGTCAGTTCTTTACCAGTGGACCATTAATTGATGGTGTGCTGGGAATGAAAGCTTACGGCAGCCTGGCAAAACGTGAAAAGGATGACCCGCAAAACTCAACGACCACCGATACCGGAGAAACGCCGCGTATTGAAGGATTCTCCAGCCGCGACGGCAATGTCGAATTTGCCTGGACACCGAATCAAAATCACGATTTTACTGCCGGATACGGTTTCGACCGTCAGGATCGTGATTCCGACTCGCTGGACAAAAACCGCCTGGAACGCCAGAACTACTCCGTCAGCCATAATGGGCGTTGGGATTACGGCACCAGCGAACTGAAATACTACGGTGAGAAAGTCGAGAACAAAAACCCTGGCAACAGCAGCCCGATAACTTCCGAAAGCAATACGGTCGACGGCAAATACACGTTGCCGCTGACGGCGATTAATCAGTTTCTCACGGTTGGCGGTGAATGGCGTCACGACAAACTTAGCGATGCGGTGAACCTGACCGGGGGAACCAGCTCCAAAACGTCTGCCAGCCAGTACGCGCTGTTTGTGGAAGATGAATGGCGGATCTTCGAGCCGCTGGCGCTGACGACCGGCGTGCGTATGGACGATCACGAAACCTACGGTGAACACTGGAGTCCGCGTGCCTACCTGGTTTATAACGCCACCGACACCGTAACGGTGAAAGGGGGCTGGGCGACGGCATTTAAAGCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACCAGCGAAAGTTGGGAGCTGGGGCTTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACCGTTTTCCGTAACGATGTGAAAGATCGTATCAGCATCAGCCGTACGTCTGACGTCAACGCTGCACCGGGCTACCAAAACTTTGTTGGTTTTGAGACGGGCGCTAACGGACGGCGCATACCGGTATTTAGCTACTACAACGTTAACAAAGCTCGTATTCAGGGCGTGGAAACCGAACTGAAAATTCCGTTCAACGATGAATGGAAACTGTCGATCAACTACACCTACAACGATGGTCGTGATGTCAGCAACGGCGAAAACAAACCGCTATCCGATCTGCCGTTCCATACTGCTAACGGTACGCTGGACTGGAAACCGCTGGCGCTGGAAGACTGGTCATTCTATGTTTCTGGGCACTATACCGGGCAGAAACGCGCCGACAGCGCGACGGCTAAAACACCGGGCGGTTATACCATCTGGAATACCGGCGCGGCCTGGCAGGTGACTAAAGACGTCAAACTGCGCGCAGGCGTGCTGAACCTTGGCGACAAGGATCTCAGTCGTGACGACTACAGCTATAACGAAGACGGACGTCGTTACTTTATGGCAGTGGATTATCGCTTCTGA", 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"pseudouridine kinase" + ], + "id": "CDS_2151", + "location": [ + [ + "NC_000913", + 2259296, + "-", + 942 + ] + ], + "md5": "40ac8285bd8840ddc565241452197406", + "parent_gene": "", + "protein_md5": "7bd5eb95b9c853157f4cb3a020d91cb2", + "protein_translation": "MREKDYVVIIGSANIDVAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMNISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWILDNAANVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGGDGVYYSDISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSSMALSCEYTNNPDLSIANVISLVENAECLN", + "protein_translation_length": 313, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b2167" + ], + [ + "gene_synonym", + "GeneID:946672" + ], + [ + "gene_synonym", + "ECK2160" + ], + [ + "gene_synonym", + "GI:16130105" + ], + [ + "gene_synonym", + "ASAP:ABE-0007172" + ], + [ + "gene_synonym", + "EcoGene:EG10336" + ], + [ + "gene_synonym", + "NP_416672.1" + ], + [ + "gene_synonym", + 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"gene_synonym", + "ASAP:ABE-0007184" + ], + [ + "gene_synonym", + "yeiO" + ], + [ + "gene_synonym", + "EcoGene:EG12034" + ], + [ + "gene_synonym", + "JW2157" + ], + [ + "gene_synonym", + "NP_416675.1" + ], + [ + "gene_synonym", + "GeneID:946673" + ], + [ + "gene_synonym", + "GI:16130108" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P0AFT8" + ], + [ + "gene_synonym", + "EcoGene:EG14375" + ], + [ + "gene_synonym", + "GI:94541118" + ], + [ + "gene_synonym", + "ASAP:ABE-0285016" + ], + [ + "gene_synonym", + "yeiW" + ], + [ + "gene_synonym", + "b4502" + ] + ], + "dna_sequence": "ATGGAATGCCGTCCGGGTTGCGGGGCGTGTTGCACTGCCCCTTCAATTTCCAGCCCTATTCCCGGTATGCCAGATGGCAAGCCCGCCAATACGCCCTGCATTCAGCTTGATGAACAGCAACGCTGTAAAATTTTCACCTCGCCACTGCGACCGAAAGTCTGTGCAGGCTTACAAGCCAGCGCTGAAATGTGCGGTAACTCGCGTCAGCAGGCCATGACCTGGCTTATCGATCTGGAAATGCTGACCGCGCCTTAA", + "dna_sequence_length": 255, + "functions": [ + "UPF0153 cysteine cluster protein" + ], + "id": "CDS_2156", + "location": [ + [ + "NC_000913", + 2265295, + "-", + 255 + ] + ], + "md5": "569f250c61811039621dea8553b4cd67", + "parent_gene": "", + "protein_md5": "dba544ddbc138316162a3bb53f91d15e", + "protein_translation": "MECRPGCGACCTAPSISSPIPGMPDGKPANTPCIQLDEQQRCKIFTSPLRPKVCAGLQASAEMCGNSRQQAMTWLIDLEMLTAP", + "protein_translation_length": 84, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW5362" + ], + [ + "gene_synonym", + "ECK2165" + ], + [ + "gene_synonym", + "GeneID:946674" + ], + [ + "gene_synonym", + "EcoGene:EG12035" + ], + [ + "gene_synonym", + "ASAP:ABE-0007187" + ], + [ + "gene_synonym", + "NP_416676.4" + ], + [ + "gene_synonym", + "GI:90111399" + ], + [ + "gene_synonym", + "b2171" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6N8" + ], + [ + "gene_synonym", + "yeiP" + ] + ], + "dna_sequence": 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"protein_translation": "MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVGSETSSLQASQDEFENLVRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRVLSRS", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76446" + ], + [ + "gene_synonym", + "b2176" + ], + [ + "gene_synonym", + "GI:16130114" + ], + [ + "gene_synonym", + "ASAP:ABE-0007203" + ], + [ + "gene_synonym", + "JW2164" + ], + [ + "gene_synonym", + "rtn" + ], + [ + "gene_synonym", + "ECK2170" + ], + [ + "gene_synonym", + "EcoGene:EG14077" + ], + [ + "gene_synonym", + "GeneID:946695" + ], + [ + "gene_synonym", + "NP_416681.1" + ] + ], + "dna_sequence": 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"ECK2173" + ], + [ + "gene_synonym", + "EcoGene:EG12040" + ], + [ + "gene_synonym", + "GeneID:946683" + ], + [ + "gene_synonym", + "NP_416684.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33915" + ] + ], + "dna_sequence": 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"JW2169" + ], + [ + "gene_synonym", + "b2181" + ], + [ + "gene_synonym", + "GeneID:945319" + ], + [ + "gene_synonym", + "GI:16130119" + ], + [ + "gene_synonym", + "ASAP:ABE-0007214" + ], + [ + "gene_synonym", + "NP_416686.1" + ], + [ + "gene_synonym", + "ECK2175" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD21" + ], + [ + "gene_synonym", + "EcoGene:EG12042" + ] + ], + "dna_sequence": "GTGACTTCATTACAACTCTCAATCGTCCATCGACTGCCGCAGAACTATCGCTGGTCTGCTGGTTTCGCAGGTTCGAAGGTTGAACCGATTCCGCAAAATGGACCGTGCGGTGACAACAGCCTGGTGGCGCTTAAATTGCTTAGCCCGGATGGTGATAATGCATGGTCGGTGATGTATAAACTAAGCCAGGCGTTAAGCGACATCGAAGTTCCATGTTCGGTGCTGGAGTGTGAAGGTGAGCCGTGCCTGTTTGTAAATCGCCAGGACGAGTTTGCTGCAACATGCCGATTGAAAAATTTTGGTGTGGCAATTGCCGAACCCTTTTCAAACTACAATCCTTTTTAA", + "dna_sequence_length": 345, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2167", + "location": [ + [ + "NC_000913", + 2278237, + "-", + 345 + ] + ], + "md5": "c0ee96572103d3f59c7673496a760b9f", + "parent_gene": "", + "protein_md5": "85d110fcb691b7a499d87f98acd9e2ce", + "protein_translation": "MTSLQLSIVHRLPQNYRWSAGFAGSKVEPIPQNGPCGDNSLVALKLLSPDGDNAWSVMYKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGVAIAEPFSNYNPF", + "protein_translation_length": 114, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW5363" + ], + [ + "gene_synonym", + "GI:16130120" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28246" + ], + [ + "gene_synonym", + "ECK2176" + ], + [ + "gene_synonym", + "b2182" + ], + [ + "gene_synonym", + "NP_416687.1" + ], + [ + "gene_synonym", + "bicA" + ], + [ + "gene_synonym", + "ASAP:ABE-0007221" + ], + [ + "gene_synonym", + "suxA" + ], + [ + "gene_synonym", + "sur" + ], + [ + "gene_synonym", + "GeneID:944808" + ], + [ + "gene_synonym", + "bicR" + ], + [ + "gene_synonym", + "EcoGene:EG11419" + ], + [ + "gene_synonym", + "bcr" + ] + ], + "dna_sequence": "GTGACCACCCGACAGCATTCGTCGTTTGCTATTGTTTTTATCCTTGGCCTGCTGGCCATGTTGATGCCGCTGTCGATTGATATGTATCTGCCCGCGCTACCGGTAATTTCAGCGCAGTTTGGCGTACCGGCGGGCAGTACGCAGATGACCCTCAGTACTTATATTCTGGGCTTTGCGTTGGGGCAGTTAATCTACGGGCCGATGGCAGACAGCTTCGGGCGTAAGCCGGTGGTGCTCGGCGGTACGCTGGTGTTTGCCGCCGCCGCGGTGGCGTGTGCGTTGGCAAACACCATCGATCAGCTGATTGTGATGCGTTTCTTCCACGGGCTGGCTGCGGCTGCGGCCAGCGTGGTCATTAACGCCCTGATGCGCGATATTTACCCGAAAGAAGAGTTCTCGCGGATGATGTCGTTTGTCATGCTGGTGACAACCATTGCACCGCTGATGGCACCGATAGTTGGCGGCTGGGTGCTGGTGTGGCTGAGCTGGCATTACATCTTCTGGATCCTGGCATTAGCGGCGATTCTGGCTTCGGCAATGATTTTCTTCCTGATTAAAGAAACCTTACCACCGGAGCGTCGTCAGCCATTTCACATTCGTACCACTATTGGTAACTTTGCGGCGCTGTTCCGCCATAAACGTGTCCTGAGCTACATGCTTGCCAGTGGTTTCAGCTTTGCCGGGATGTTCTCATTCTTAAGCGCCGGACCGTTTGTTTATATTGAAATTAACCACGTCGCGCCGGAAAACTTTGGTTATTACTTTGCGCTAAACATTGTTTTTCTGTTCGTGATGACCATCTTTAACAGCCGCTTCGTCCGCCGCATTGGCGCGTTAAATATGTTCCGCTCGGGGTTGTGGATACAATTTATTATGGCAGCGTGGATGGTCATCAGTGCGCTGCTGGGGCTGGGATTTTGGTCGCTGGTGGTTGGCGTTGCGGCGTTTGTGGGCTGCGTGTCGATGGTGTCATCCAATGCGATGGCGGTCATTCTTGATGAGTTTCCCCATATGGCGGGAACGGCATCTTCGCTGGCAGGAACCTTCCGTTTTGGCATAGGGGCAATTGTTGGCGCATTGCTTTCTCTTGCGACCTTTAACTCTGCATGGCCGATGATTTGGTCAATTGCATTCTGCGCAACCAGCTCCATTCTCTTCTGTCTGTACGCCAGTCGGCCGAAAAAACGGTGA", 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"b2183" + ], + [ + "gene_synonym", + "JW2171" + ], + [ + "gene_synonym", + "GeneID:945378" + ], + [ + "gene_synonym", + "ASAP:ABE-0007223" + ], + [ + "gene_synonym", + "NP_416688.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA43" + ], + [ + "gene_synonym", + "EcoGene:EG12044" + ] + ], + "dna_sequence": 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"gene_synonym", + "UniProtKB/Swiss-Prot:P0AD24" + ], + [ + "gene_synonym", + "JW2175" + ], + [ + "gene_synonym", + "GeneID:946694" + ], + [ + "gene_synonym", + "NP_416692.1" + ] + ], + "dna_sequence": "ATGCCACAAATTTCCCGCTACAGTGATGAACAGGTTGAACAATTGCTCGCAGAGCTGCTCAACGTACTGGAAAAACATAAGGCTCCGACCGACCTTTCCCTGATGGTGTTAGGCAACATGGTCACTAACCTTATCAACACCAGCATTGCCCCGGCCCAACGCCAGGCAATTGCCAACTCTTTTGCCCGCGCCTTACAGTCCTCTATCAACGAAGACAAAGCGCACTAA", + "dna_sequence_length": 228, + "functions": [ + "UPF0352 family protein" + ], + "id": "CDS_2173", + "location": [ + [ + "NC_000913", + 2284129, + "+", + 228 + ] + ], + "md5": "8bb93ff0c9fdc7b67090a16e0b8498da", + "parent_gene": "", + "protein_md5": "36e730ae4c428e9a0ba546ba875139de", + "protein_translation": "MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNLINTSIAPAQRQAIANSFARALQSSINEDKAH", + "protein_translation_length": 75, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b2188" + ], + [ + "gene_synonym", + "ECK2182" + ], + [ + "gene_synonym", + "EcoGene:EG12049" + ], + [ + "gene_synonym", + "yejM" + ], + [ + "gene_synonym", + "yejN" + ], + [ + "gene_synonym", + "JW2176" + ], + [ + "gene_synonym", + "GI:16130126" + ], + [ + "gene_synonym", + "NP_416693.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD27" + ], + [ + "gene_synonym", + "GeneID:946685" + ], + [ + "gene_synonym", + "ASAP:ABE-0007240" + ] + ], + "dna_sequence": 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"protein_translation_length": 586, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33924" + ], + [ + "gene_synonym", + "EcoGene:EG12051" + ], + [ + "gene_synonym", + "GeneID:946867" + ], + [ + "gene_synonym", + "ECK2184" + ], + [ + "gene_synonym", + "yejO" + ], + [ + "gene_synonym", + "b2190" + ], + [ + "gene_synonym", + "JW5839" + ], + [ + "gene_synonym", + "ASAP:ABE-0007244" + ] + ], + "dna_sequence": 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"MHQSGSVSLCRSAISVLVATALYSPIALASTVEYGETVDGVVLEKDIQLVYGTANNTKINPGGEQHIKEFGVSNNTEINGGYQYIEMNGAAEYSVLNDGYQIVQMGGAANQTTLNNGVLQVYGAANDTTIKGGRLIVEKDGGAVFVAIEKGGLLEVKEGGFAFAVDQKAGGAIKTTTRAMEVFGTNRLGQFDIKNGIANNMLLENGGSLRVEENDFAYNTTVDSGGLLEVMDGGTVTGVDKKAGGKLIVSTNALEVSGPNSKGQFSIKDGVSKNYELDDGSGLIVMEDTQAIDTILDKHATMQSLGKDTGTKVQANAVYDLGRSYQNGSITYSSKAISENMVINNGRANVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGKVVVSEGASFRTHGAVDTSKADVSLENSVWTIIADITTTNQNTLLNLANLAMSDANVIMMDEPVTRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGASPAAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLVFDAELDTVRERLGSVKGVSYDTAMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESSTIRGLIFGYSHSDIGFDRGGKGNIDSYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDGQDYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVNDDGKFNNDVAGTSGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF", + "protein_translation_length": 863, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16130129" + ], + [ + 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"gene_synonym", + "UniProtKB/Swiss-Prot:P06996" + ], + [ + "gene_synonym", + "butR" + ], + [ + "gene_synonym", + "JW2203" + ], + [ + "gene_synonym", + "ompC" + ], + [ + "gene_synonym", + "NP_416719.1" + ], + [ + "gene_synonym", + "GI:16130152" + ], + [ + "gene_synonym", + "ASAP:ABE-0007321" + ], + [ + "gene_synonym", + "meoA" + ] + ], + "dna_sequence": "ATGAAAGTTAAAGTACTGTCCCTCCTGGTCCCAGCTCTGCTGGTAGCAGGCGCAGCAAACGCTGCTGAAGTTTACAACAAAGACGGCAACAAATTAGATCTGTACGGTAAAGTAGACGGCCTGCACTATTTCTCTGACAACAAAGATGTAGATGGCGACCAGACCTACATGCGTCTTGGCTTCAAAGGTGAAACTCAGGTTACTGACCAGCTGACCGGTTACGGCCAGTGGGAATATCAGATCCAGGGCAACAGCGCTGAAAACGAAAACAACTCCTGGACCCGTGTGGCATTCGCAGGTCTGAAATTCCAGGATGTGGGTTCTTTCGACTACGGTCGTAACTACGGCGTTGTTTATGACGTAACTTCCTGGACCGACGTACTGCCAGAATTCGGTGGTGACACCTACGGTTCTGACAACTTCATGCAGCAGCGTGGTAACGGCTTCGCGACCTACCGTAACACTGACTTCTTCGGTCTGGTTGACGGCCTGAACTTTGCTGTTCAGTACCAGGGTAAAAACGGCAACCCATCTGGTGAAGGCTTTACTAGTGGCGTAACTAACAACGGTCGTGACGCACTGCGTCAAAACGGCGACGGCGTCGGCGGTTCTATCACTTATGATTACGAAGGTTTCGGTATCGGTGGTGCGATCTCCAGCTCCAAACGTACTGATGCTCAGAACACCGCTGCTTACATCGGTAACGGCGACCGTGCTGAAACCTACACTGGTGGTCTGAAATACGACGCTAACAACATCTACCTGGCTGCTCAGTACACCCAGACCTACAACGCAACTCGCGTAGGTTCCCTGGGTTGGGCGAACAAAGCACAGAACTTCGAAGCTGTTGCTCAGTACCAGTTCGACTTCGGTCTGCGTCCGTCCCTGGCTTACCTGCAGTCTAAAGGTAAAAACCTGGGTCGTGGCTACGACGACGAAGATATCCTGAAATATGTTGATGTTGGTGCTACCTACTACTTCAACAAAAACATGTCCACCTACGTTGACTACAAAATCAACCTGCTGGACGACAACCAGTTCACTCGTGACGCTGGCATCAACACTGATAACATCGTAGCTCTGGGTCTGGTTTACCAGTTCTAA", 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"ATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTCGACATTACCCATGCTATCCAAAAGCGCGTCGATAACTGGCGTTACGTGACCTGGCAGATCTACGACAACATTGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTCTACTATCTGGAGAAACCACGCCGCAAAACGGAAGCGTTAATCTTTGGCTCTCACGACAACTCAACGCTTGAGATGACTCAGCGGATGTCCACTTATCTGGATACATTGTGGGGCGCAGAAAATGTACCGTGGTCGATGTATTACCTGAATGGTCAGGATAACAGTCTGGTGCTGATCTCAACCCTACCCCTTAAAGATCTCACCTCCGGATTTAAAGAATCGACCGTCAGCGACATTGTTGATTCACGTCGTGCAGAGATGTTGCAACAGGCCAACGCCCTCGATGAACGCGAAAGCTTTTCTAACATGCGCCGCCTGGCCTGGCAGAACGGTCATTACTTTACATTGCGTACTACCTTTAACCAGCCAGGACATCTGGCAACGGTCGTGGCTTTTGATCTGCCGATTAATGATTTGATCCCACCGGGTATGCCGCTGGACAGTTTCCGCCTTGAGCCAGACGCGACGGCAACGGGAAACAATGATAATGAGAAAGAAGGGACGGATAGCGTCAGTATCCACTTTAACAGTACGAAGATTGAAATCTCCTCGGCACTCAACTCTACCGATATGCGCCTGGTCTGGCAGGTTCCTTATGGCACCTTATTGCTGGATACGTTGCAAAACATTCTGCTGCCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGTTCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCGCATTTGAATCTGCAAAACATCACCACCATGGCGGAACAGCATCAGGGGATTATTCAGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGCACAGTCCCTGGCGGAGAGCGCGGCTAAACTCAACGCCCCGGAAAGCAAACAACTGGCGAATCAGGCAGATGTGCTGGTGCGGCTGGTTGATGAAATACAGTTAGCGAACATGCTTGCGGATGATAGCTGGAAAAGTGAGACGGTGCTGTTCTCCGTGCAGGATTTAATTGATGAAGTTGTGCCTTCAGTGTTGCCTGCCATCAAGCGTAAAGGTCTGCAACTGCTGATTAACAATCATCTGAAAGCACACGATATGCGCCGCGGCGATCGCGATGCCTTACGACGTATTTTGCTGCTACTGATGCAATATGCCGTGACCTCAACGCAATTGGGAAAAATCACCCTTGAGGTTGATCAGGATGAGTCCTCCGAAGACCGCCTGACGTTCCGCATTCTGGACACGGGAGAAGGCGTAAGTATTCATGAAATGGATAATTTGCACTTCCCGTTTATCAACCAGACCCAAAACGATCGCTATGGCAAGGCGGACCCGCTGGCATTCTGGCTGAGCGATCAACTGGCACGTAAACTGGGCGGTCATTTAAACATCAAAACGCGGGATGGGCTTGGTACACGCTACTCTGTGCATATCAAAATGCTCGCAGCTGACCCGGAAGTTGAAGAGGAAGAAGAGCGTTTACTGGATGATGTCTGCGTAATGGTGGATGTTACTTCGGCAGAAATTCGGAATATTGTCACTCGCCAGTTAGAAAATTGGGGTGCAACCTGTATCACACCCGATGAAAGATTAATTAGTCAAGATTATGATATCTTTTTAACGGATAATCCGTCTAATCTTACTGCCTCTGGCTTGCTTTTAAGCGATGATGAGTCTGGCGTACGGGAAATTGGGCCTGGTCAATTGTGCGTCAACTTCAATATGAGCAACGCTATGCAGGAAGCGGTCTTACAATTAATTGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGCGGCTATTATGCGCTCTTTGTAGACACAGTACCGGATGATGTTAAGAGGCTGTATACTGAAGCAGCAACCAGTGACTTTGCTGCGTTAGCCCAAACGGCTCATCGTCTTAAAGGCGTATTTGCCATGCTAAATCTGGTACCCGGCAAGCAGTTATGTGAAACGCTGGAACATCTGATTCGTGAGAAGGATGTTCCAGGAATAGAAAAATACATCAGCGACATTGACAGTTATGTCAAGAGCTTGCTGTAG", 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"MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAWLKDKSYQIVDITHAIQKRVDNWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYLEKPRRKTEALIFGSHDNSTLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLISTLPLKDLTSGFKESTVSDIVDSRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTTFNQPGHLATVVAFDLPINDLIPPGMPLDSFRLEPDATATGNNDNEKEGTDSVSIHFNSTKIEISSALNSTDMRLVWQVPYGTLLLDTLQNILLPLLLNIGLLALALFGYTTFRHFSSRSTENVPSTAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHLNLQNITTMAEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQAQRLYEKNQQGRMIFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQADVLVRLVDEIQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGDRDALRRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLHFPFINQTQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHIKMLAADPEVEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNPSNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLGGDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL", + "protein_translation_length": 890, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:947441" + ], + [ + "gene_synonym", + "rcsB" + ], + [ + "gene_synonym", + "b2217" + ], + [ + "gene_synonym", + "viaA" + ], + [ + "gene_synonym", + "EcoGene:EG10821" + ], + [ + "gene_synonym", + "JW2205" + ], + [ + "gene_synonym", + "ECK2210" + ], + [ + "gene_synonym", + "NP_416721.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69407" + ], + [ + "gene_synonym", + "ASAP:ABE-0007333" + ], + [ + "gene_synonym", + "GI:16130154" + ] + ], + "dna_sequence": "ATGAACAATATGAACGTAATTATTGCCGATGACCATCCGATAGTCTTGTTCGGTATTCGCAAATCACTTGAGCAAATTGAGTGGGTGAATGTTGTCGGCGAATTTGAAGACTCTACAGCACTGATCAACAACCTGCCGAAACTGGATGCGCATGTGTTGATTACCGATCTCTCCATGCCTGGCGATAAGTACGGCGATGGCATTACCTTAATCAAGTACATCAAGCGCCATTTCCCAAGCCTGTCGATCATTGTTCTGACTATGAACAACAACCCGGCGATTCTTAGTGCGGTATTGGATCTGGATATCGAAGGGATCGTGCTGAAACAAGGTGCACCGACCGATCTGCCGAAAGCTCTCGCCGCGCTGCAGAAAGGGAAGAAATTTACCCCGGAAAGCGTTTCTCGCCTGTTGGAAAAAATCAGTGCTGGTGGTTACGGTGACAAGCGTCTCTCGCCAAAAGAGAGTGAAGTTCTGCGCCTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAA", + "dna_sequence_length": 651, + "functions": [ + "response regulator in two-component regulatory system with RcsC and YojN" + ], + "id": "CDS_2201", + "location": [ + [ + "NC_000913", + 2316177, + "+", + 651 + ] + ], + "md5": "6d02d2f75b6b3f3dee5cf962aaa143cc", + "parent_gene": "", + "protein_md5": "a4d0d02728a620eaca1f24bb25ab0c46", + "protein_translation": "MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK2211" + ], + [ + "gene_synonym", + "rcsC" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14376" + ], + [ + "gene_synonym", + "JW5917" + ], + [ + "gene_synonym", + "b2218" + ], + [ + "gene_synonym", + "GeneID:948993" + ], + [ + "gene_synonym", + "NP_416722.2" + ], + [ + "gene_synonym", + "JW5920" + ], + [ + "gene_synonym", + "EcoGene:EG10822" + ], + [ + "gene_synonym", + "ASAP:ABE-0007336" + ], + [ + "gene_synonym", + "GI:145698285" + ] + ], + "dna_sequence": "TTGAAATACCTTGCTTCTTTTCGTACAACCCTGAAAGCCTCGCGCTACATGTTCAGAGCATTGGCGTTAGTGCTCTGGCTGTTGATTGCTTTTTCATCCGTTTTTTACATCGTTAATGCGTTACATCAGCGAGAATCGGAAATTCGTCAGGAATTTAATCTGAGTTCCGATCAGGCTCAGCGCTTTATTCAACGCACCTCTGATGTGATGAAAGAGCTGAAGTACATCGCCGAAAATCGCTTATCGGCAGAAAACGGTGTGCTTTCCCCGCGTGGACGAGAAACGCAGGCGGATGTGCCTGCGTTTGAACCGCTGTTTGCCGACTCCGATTGTTCCGCAATGAGTAACACCTGGCGAGGTTCTCTGGAGTCATTGGCGTGGTTTATGCGCTACTGGCGCGATAATTTTTCTGCGGCTTACGATCTAAACCGGGTATTTTTAATCGGCAGCGATAACCTCTGCATGGCCAATTTCGGTCTGCGTGATATGCCAGTGGAACGCGATACCGCGTTGAAAGCTTTGCATGAACGCATCAATAAATATCGAAATGCACCACAAGATGATAGCGGCAGTAACCTCTACTGGATCAGCGAAGGTCCGCGCCCTGGCGTCGGGTATTTTTACGCGTTGACGCCAGTTTATCTGGCGAACCGGTTGCAGGCGCTTTTGGGTGTCGAGCAGACCATCCGGATGGAGAACTTTTTCTTACCGGGTACGTTGCCGATGGGGGTTACCATTCTTGATGAAAATGGTCATACCCTGATTTCGCTTACCGGACCAGAAAGTAAAATTAAGGGCGATCCTCGCTGGATGCAGGAACGCTCCTGGTTTGGCTATACGGAAGGGTTCCGGGAGCTGGTGCTGAAGAAAAATCTGCCACCCTCATCGCTAAGCATCGTGTATTCGGTGCCGGTTGATAAGGTGCTGGAACGCATTCGCATGTTGATCCTTAACGCAATTTTGCTGAATGTGCTTGCCGGAGCTGCATTGTTTACTCTCGCACGGATGTACGAGCGACGTATTTTCATTCCGGCGGAAAGCGACGCCCTGCGACTGGAAGAACATGAGCAGTTCAATCGCAAGATTGTCGCCTCCGCGCCAGTGGGTATCTGCATTTTGCGTACCGCTGATGGCGTCAATATTTTAAGTAACGAACTGGCGCATACCTATCTCAATATGCTTACGCATGAGGACCGCCAACGACTGACGCAAATTATCTGTGGGCAGCAGGTCAATTTTGTTGATGTCCTGACCAGCAACAATACCAATCTGCAAATCAGCTTCGTCCATTCGCGCTATCGTAATGAAAACGTGGCCATTTGTGTGCTGGTGGATGTTTCTTCGCGCGTGAAGATGGAAGAGTCGTTGCAGGAGATGGCACAAGCAGCGGAACAGGCGAGCCAGTCAAAATCGATGTTCCTTGCCACCGTCAGTCATGAGCTGCGAACGCCGCTGTATGGCATTATCGGTAACCTGGATCTGTTGCAAACCAAAGAGTTACCGAAAGGCGTCGATCGGCTGGTGACGGCAATGAACAACTCTTCCAGCCTGTTGTTGAAAATTATCAGCGATATTCTCGATTTCTCGAAGATTGAATCGGAACAGTTGAAGATCGAACCGCGTGAGTTTTCACCGCGTGAAGTGATGAACCACATCACCGCCAACTATTTACCGCTGGTGGTACGCAAGCAGTTAGGCTTGTACTGCTTTATTGAACCGGATGTGCCAGTGGCCTTAAATGGCGACCCGATGCGTTTACAGCAGGTCATCTCCAACCTGTTGAGTAACGCCATAAAATTCACCGATACCGGCTGTATAGTTTTGCATGTTCGCGCGGATGGCGATTATCTCTCTATCCGTGTTCGCGATACCGGCGTGGGGATACCGGCGAAAGAAGTGGTGCGCTTGTTTGATCCCTTCTTCCAGGTCGGAACGGGCGTACAGCGTAATTTCCAGGGGACCGGTCTGGGTCTGGCGATTTGTGAAAAACTGATCAGCATGATGGACGGCGATATCTCGGTAGATTCAGAACCGGGAATGGGCAGCCAGTTTACCGTGCGTATTCCGTTGTACGGCGCTCAGTACCCGCAGAAAAAAGGCGTGGAAGGGTTGAGTGGTAAACGCTGCTGGCTGGCGGTCCGCAATGCGTCGCTCTGTCAGTTCCTGGAAACCAGTTTGCAGCGCAGCGGCATCGTCGTTACAACATACGAAGGGCAGGAACCGACTCCCGAAGATGTGTTGATCACTGACGAGGTAGTGAGTAAAAAATGGCAGGGCAGAGCGGTAGTGACCTTCTGTCGTCGCCATATTGGTATTCCGCTGGAGAAAGCGCCAGGGGAGTGGGTACACAGTGTGGCTGCTCCGCATGAGCTACCGGCATTGTTGGCGCGTATTTATTTGATCGAGATGGAGAGCGACGATCCTGCTAACGCTCTGCCGTCAACGGACAAAGCGGTCAGCGATAATGACGATATGATGATTCTGGTCGTGGATGATCATCCGATTAACCGGCGTTTGCTGGCAGATCAGTTGGGATCGTTGGGCTATCAATGTAAAACCGCGAATGATGGCGTCGATGCGCTTAATGTACTTAGCAAGAATCATATTGATATCGTGCTTAGCGACGTCAACATGCCAAATATGGATGGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGGGTCAGGAAATCGCGGGATTCGTAG", 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"CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK2212" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q06067" + ], + [ + "gene_synonym", + "NP_416723.1" + ], + [ + "gene_synonym", + "atoS" + ], + [ + "gene_synonym", + "JW2213" + ], + [ + "gene_synonym", + "b2219" + ], + [ + "gene_synonym", + "EcoGene:EG11667" + ], + [ + "gene_synonym", + "GeneID:949011" + ], + [ + "gene_synonym", + "ASAP:ABE-0007341" + ], + [ + "gene_synonym", + "GI:16130156" + ] + ], + "dna_sequence": "ATGCATTATATGAAGTGGATTTATCCACGCCGCTTACGCAATCAAATGATCCTGATGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATCGTAGAAACGGAAGGACGTTCAGCAGTCTTATCTGAAAAAGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTGCCCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTCAGGCAGGCAGGTGCGCGGCGATATTTTGAATTCAATGCTCCCCATTGAGCGTAATGGTGAAATCCTCGGCTATATCTGGGCCAATGAATTAACCGAAGATATTCGCCGCCAGGCCTGGAAAATGGATGTGAGGATTATCATTGTGCTCACCGCTGGTTTGCTGATAAGCCTGCTGTTGATTGTCCTTTTCTCCCGTCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTGAAAACGCTGCCGATGGCGTCATTGCCATTGACCGCCAGGGTGATGTAACCACCATGAACCCAGCAGCAGAAGTTATCACTGGCTATCAACGCCATGAACTGGTAGGGCAGCCTTACTCCATGTTGTTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCGTGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTGATTTAACTGCCCGCAAAGAAACCCAGCGCCGCATGGCGCAAGCAGAACGCCTCGCCACACTGGGTGAGCTGATGGCTGGCGTCGCGCATGAAGTACGTAATCCGTTAACGGCTATTCGTGGTTATGTACAGATCTTGCGCCAACAAACCAGTGACCCAATACATCAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGTTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGAATATCCTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGA", 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"protein_translation_length": 608, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK2213" + ], + [ + "gene_synonym", + "NP_416724.1" + ], + [ + "gene_synonym", + "GeneID:947444" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q06065" + ], + [ + "gene_synonym", + "JW2214" + ], + [ + "gene_synonym", + "ASAP:ABE-0007343" + ], + [ + "gene_synonym", + "GI:16130157" + ], + [ + "gene_synonym", + "atoC" + ], + [ + "gene_synonym", + "Az" + ], + [ + "gene_synonym", + "b2220" + ], + [ + "gene_synonym", + "EcoGene:EG11668" + ] + ], + "dna_sequence": 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"protein_translation": "MKTKLMTLQDATGFFRDGMTIMVGGFMGIGTPSRLVEALLESGVRDLTLIANDTAFVDTGIGPLIVNGRVRKVIASHIGTNPETGRRMISGEMDVVLVPQGTLIEQIRCGGAGLGGFLTPTGVGTVVEEGKQTLTLDGKTWLLERPLRADLALIRAHRCDTLGNLTYQLSARNFNPLIALAADITLVEPDELVETGELQPDHIVTPGAVIDHIIVSQESK", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK2215" + ], + [ + "gene_synonym", + "GeneID:946719" + ], + [ + "gene_synonym", + "JW2216" + ], + [ + "gene_synonym", + "ASAP:ABE-0007349" + ], + [ + "gene_synonym", + "NP_416726.1" + ], + [ + "gene_synonym", + "EcoGene:EG11670" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76459" + ], + [ + "gene_synonym", + "GI:16130159" + ], + [ + "gene_synonym", + "atoA" + ], + [ + "gene_synonym", + "b2222" + ] + ], + "dna_sequence": 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"MDAKQRIARRVAQELRDGDIVNLGIGLPTMVANYLPEGIHITLQSENGFLGLGPVTTAHPDLVNAGGQPCGVLPGAAMFDSAMSFALIRGGHIDACVLGGLQVDEEANLANWVVPGKMVPGMGGAMDLVTGSRKVIIAMEHCAKDGSAKILRRCTMPLTAQHAVHMLVTELAVFRFIDGKMWLTEIADGCDLATVRAKTEARFEVAADLNTQRGDL", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK2216" + ], + [ + "gene_synonym", + "GI:16130160" + ], + [ + "gene_synonym", + "GeneID:946721" + ], + [ + "gene_synonym", + "JW2217" + ], + [ + "gene_synonym", + "NP_416727.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76460" + ], + [ + "gene_synonym", + "ASAP:ABE-0007353" + ], + [ + "gene_synonym", + "EcoGene:EG11671" + ], + [ + "gene_synonym", + "b2223" + ], + [ + "gene_synonym", + "atoE" + ] + ], + "dna_sequence": "ATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCGATCCACTGATCTTTGCCATGTTGCTGACATTGCTAACATTCGTGATCGCGCTTTGGTTAACACCACAAACGCCGATCAGCATGGTGAAAATGTGGGGTGACGGTTTCTGGAACTTGCTGGCGTTTGGTATGCAGATGGCGCTTATCATCGTTACCGGTCATGCCCTTGCCAGCTCTGCTCCGGTGAAAAGTTTGCTGCGTACTGCCGCCTCCGCCGCAAAGACGCCCGTACAGGGCGTCATGCTGGTCACTTTCTTCGGTTCAGTCGCTTGTGTCATCAACTGGGGATTTGGTTTGGTTGTCGGCGCAATGTTTGCCCGTGAAGTCGCCCGGCGAGTCCCCGGTTCTGATTATCCGTTGCTCATTGCCTGCGCCTACATTGGTTTTCTCACCTGGGGTGGCGGCTTCTCTGGATCAATGCCTCTGTTGGCTGCAACACCGGGCAACCCGGTTGAGCATATCGCCGGGCTGATCCCGGTGGGCGATACTCTGTTCAGTGGTTTTAACATTTTCATCACTGTGGCGTTGATTGTGGTGATGCCATTTATCACCCGCATGATGATGCCAAAACCGTCTGACGTGGTGAGTATCGATCCAAAACTACTCATGGAAGAGGCTGATTTTCAAAAGCAGCTACCGAAAGATGCCCCACCATCCGAGCGACTGGAAGAAAGCCGCATTCTGACGTTGATCATCGGCGCACTCGGTATCGCTTACCTTGCGATGTACTTCAGCGAACATGGCTTCAACATCACCATCAATACCGTCAACCTGATGTTTATGATTGCGGGTCTGCTGCTACATAAAACGCCAATGGCTTATATGCGTGCTATCAGCGCGGCAGCACGCAGTACTGCCGGTATTCTGGTGCAATTCCCCTTCTACGCTGGGATCCAACTGATGATGGAGCATTCCGGTCTGGGCGGACTCATTACCGAATTCTTCATCAATGTTGCGAACAAAGACACCTTCCCGGTAATGACCTTTTTTAGTTCTGCACTGATTAACTTCGCCGTTCCGTCTGGCGGCGGTCACTGGGTTATTCAGGGACCTTTCGTGATACCCGCAGCCCAGGCGCTGGGCGCTGATCTCGGTAAATCGGTAATGGCGATCGCCTACGGCGAGCAATGGATGAACATGGCACAACCATTCTGGGCGCTGCCAGCACTGGCAATCGCCGGACTCGGTGTCCGCGACATCATGGGCTACTGCATCACTGCCCTGCTCTTCTCCGGTGTCATTTTCGTCATTGGTTTAACGCTGTTCTGA", 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"GeneID:946727" + ], + [ + "gene_synonym", + "EcoGene:EG11672" + ], + [ + "gene_synonym", + "atoB" + ], + [ + "gene_synonym", + "b2224" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76461" + ], + [ + "gene_synonym", + "ASAP:ABE-0007355" + ], + [ + "gene_synonym", + "NP_416728.1" + ] + ], + "dna_sequence": "ATGAAAAATTGTGTCATCGTCAGTGCGGTACGTACTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCACCGCTGGGAACGCGTCTGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCCGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCATTTGCTGCACAGTTCCTTGCCGTTGGGAAAAACCTGGGCTTTGATTCTGAGAAAGTGAATGTCAACGGCGGGGCCATCGCGCTCGGGCATCCTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAA", 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"gene_synonym", + "NP_416729.1" + ], + [ + "gene_synonym", + "b2225" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76462" + ], + [ + "gene_synonym", + "EcoGene:EG14078" + ], + [ + "gene_synonym", + "ASAP:ABE-0007357" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16130166" + ], + [ + "gene_synonym", + "nalA" + ], + [ + "gene_synonym", + "parD" + ], + [ + "gene_synonym", + "EcoGene:EG10423" + ], + [ + "gene_synonym", + "gyrA" + ], + [ + "gene_synonym", + "JW2225" + ], + [ + "gene_synonym", + "ECK2223" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AES4" + ], + [ + "gene_synonym", + "GeneID:946614" + ], + [ + "gene_synonym", + "nfxA" + ], + [ + "gene_synonym", + "norA" + ], + [ + "gene_synonym", + "hisW" + ], + [ + "gene_synonym", + "NP_416734.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0007370" + ], + [ + "gene_synonym", + "b2231" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "GeneID:946607" + ], + [ + "gene_synonym", + "pufX" + ], + [ + "gene_synonym", + "JW2226" + ], + [ + "gene_synonym", + "ECK2224" + ], + [ + "gene_synonym", + "NP_416735.1" + ], + [ + "gene_synonym", + "yfaB" + ], + [ + "gene_synonym", + "EcoGene:EG11143" + ], + [ + "gene_synonym", + "ASAP:ABE-0007374" + ], + [ + "gene_synonym", + "ubiG" + ], + [ + "gene_synonym", + "b2232" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17993" + ] + ], + "dna_sequence": 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"ed1a243e8d27869395b7eb2c096078b0", + "parent_gene": "", + "protein_md5": "c85df4f0f034c51fe420ff314ef1d243", + "protein_translation": "MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45508" + ], + [ + "gene_synonym", + "GeneID:946595" + ], + [ + "gene_synonym", + "NP_416736.1" + ], + [ + "gene_synonym", + "EcoGene:EG12850" + ], + [ + "gene_synonym", + "JW2227" + ], + [ + "gene_synonym", + "ECK2225" + ], + [ + "gene_synonym", + "yfaF" + ], + [ + "gene_synonym", + "ASAP:ABE-0007377" + ], + [ + "gene_synonym", + "yfaK" + ], + [ + "gene_synonym", + "yfaL" + ], + [ + "gene_synonym", + "GI:16130168" + ], + [ + "gene_synonym", + "yfaJ" + ], + [ + "gene_synonym", + "b2233" + ] + ], + "dna_sequence": "ATGCGGATTATCTTTCTACGCAAGGAGTATTTATCTTTACTCCCGTCAATGATTGCATCTCTTTTCTCTGCTAACGGTGTCGCGGCGGTCACTGATTCATGCCAGGGATATGATGTCAAAGCGAGTTGTCAGGCCAGCAGGCAAAGCCTTTCAGGCATTACGCAGGACTGGAGTATCGCTGATGGGCAATGGCTGGTTTTTTCGGATATGACCAATAACGCCAGCGGTGGGGCCGTATTTTTGCAACAAGGAGCGGAATTTTCACTATTACCAGAAAATGAAACTGGAATGACTCTGTTTGCCAATAACACCGTTACAGGAGAATATAATAACGGCGGGGCCATATTTGCTAAAGAAAACTCAACGCTGAATCTTACTGATGTTATTTTTTCCGGTAACGTCGCAGGCGGCTATGGTGGCGCAATCTATTCTTCTGGTACTAACGATACTGGTGCCGTCGATTTACGTGTCACTAACGCCATGTTTCGCAATAACATCGCTAATGATGGCAAAGGTGGCGCAATTTATACCATTAATAATGACGTTTATTTAAGTGATGTTATTTTTGATAACAACCAGGCATATACATCAACAAGTTACAGTGATGGCGATGGCGGGGCAATCGATGTTACCGATAATAATAGCGACAGCAAGCATCCTTCAGGTTATACGATAGTAAATAACACTGCCTTTACAAATAACACTGCCGAAGGTTATGGCGGGGCGATATATACCAATAGCGTGACGGCTCCCTATCTTATTGATATTTCTGTTGATGACAGCTACAGCCAGAACGGAGGCGTGTTAGTCGATGAGAACAATAGCGCAGCAGGCTATGGAGATGGTCCTTCCTCTGCGGCGGGTGGCTTTATGTATCTCGGCTTAAGTGAAGTTACCTTTGATATTGCCGACGGAAAAACGCTGGTTATTGGCAATACAGAGAATGACGGAGCTGTTGACTCTATTGCTGGTACCGGGTTAATCACCAAAACAGGTTCCGGCGATCTGGTACTTAATGCAGATAACAATGACTTTACTGGTGAGATGCAGATTGAAAACGGTGAAGTTACCCTGGGCCGCAGCAACTCCCTGATGAATGTCGGCGATACGCATTGCCAGGACGATCCGCAAGACTGCTACGGTCTGACGATAGGGAGTATTGATCAGTATCAGAATCAGGCTGAGCTAAACGTTGGCTCGACCCAACAAACTTTTGTGCACGCATTGACGGGCTTTCAGAATGGCACTTTAAATATCGATGCTGGTGGCAACGTTACTGTTAATCAGGGCAGTTTTGCTGGCATCATCGAAGGTGCTGGTCAGCTCACCATTGCGCAAAACGGCAGCTACGTGCTGGCAGGGGCGCAGTCGATGGCGCTAACCGGCGATATAGTCGTTGATGATGGTGCGGTGCTTTCGCTGGAAGGCGACGCGGCAGATCTTACCGCTCTCCAGGACGATCCGCAGTCGATCGTGTTAAACGGCGGTGTGCTCGATCTCTCTGATTTCTCCACCTGGCAGAGCGGCACATCATACAACGATGGCCTTGAAGTCAGTGGCAGCAGCGGAACGGTTATCGGCAGTCAGGATGTGGTAGATCTTGCAGGTGGCGACAATTTGCATATCGGCGGCGACGGGAAAGATGGCGTCTACGTGGTGGTCGATGCGAGCGACGGGCAGGTAAGTCTGGCAAACAATAATAGTTATTTGGGCACAACACAAATCGCCTCCGGTACGCTGATGGTGAGCGACAACTCGCAGCTTGGAGATACCCACTATAACCGCCAGGTTATCTTTACCGATAAGCAACAAGAAAGCGTGATGGAGATTACCTCCGACGTTGACACGCGTTCAGATGCGGCAGGCCACGGACGTGATATTGAAATGCGCGCCGACGGTGAAGTGGCAGTTGATGCGGGGGTAGACACGCAGTGGGGCGCACTGATGGCTGACAGCAGCGGGCAGCATCAGGATGAGGGTAGCACATTGACTAAAACGGGGGCTGGTACACTGGAGCTGACCGCCAGCGGTACAACGCAGTCGGCGGTACGTGTCGAAGAAGGCACCCTGAAAGGTGATGTTGCTGATATCCTTCCTTATGCTTCGTCACTGTGGGTTGGTGATGGGGCAACGTTCGTTACTGGCGCGGATCAGGATATTCAGTCAATTGATGCTATTTCCAGCGGCACTATCGACATCAGCGATGGTACGGTTTTGCGCCTGACCGGGCAGGATACTTCCGTCGCCCTTAATGCCTCACTATTTAACGGCGATGGGACGCTGGTGAATGCCACCGATGGTGTGACGTTGACAGGTGAGCTTAATACCAACCTTGAAACTGACAGCCTGACTTATCTTTCCAACGTGACGGTTAATGGCAATCTGACCAATACGTCCGGTGCGGTTAGCCTGCAAAATGGCGTCGCTGGCGATACGCTGACGGTAAACGGTGATTATACCGGCGGCGGTACGCTACTGCTCGATAGCGAATTAAACGGCGATGACTCGGTAAGCGATCAATTGGTGATGAACGGTAATACTGCTGGCAACACAACTGTGGTGGTTAACTCCATTACAGGGATTGGTGAGCCGACATCGACAGGCATTAAAGTGGTTGATTTCGCAGCTGATCCCACGCAGTTTCAAAACAATGCGCAGTTCAGTCTGGCAGGCAGCGGCTACGTCAATATGGGAGCGTATGACTACACGCTGGTGGAAGATAACAACGACTGGTATCTGCGATCGCAAGAAGTAACGCCGCCATCGCCACCTGATCCAGACCCGACTCCCGATCCTGATCCCACGCCGGATCCTGATCCAACACCCGACCCGGAACCTACGCCTGCTTACCAGCCGGTGTTGAATGCCAAAGTTGGCGGTTATCTTAATAACCTGCGGGCGGCAAATCAGGCGTTTATGATGGAGCGACGCGATCACGCAGGTGGCGATGGTCAGACGCTGAATTTACGTGTTATCGGCGGAGATTATCATTACACAGCAGCGGGGCAACTGGCTCAACATGAAGACACTTCTACGGTGCAACTTAGCGGCGATCTGTTTAGCGGGCGCTGGGGCACGGATGGCGAGTGGATGCTTGGGATTGTTGGTGGCTACAGCGATAACCAGGGCGACAGCCGCTCGAATATGACCGGAACTCGCGCCGATAACCAGAACCACGGTTATGCCGTTGGGCTGACATCAAGCTGGTTTCAGCACGGTAATCAGAAGCAAGGGGCCTGGCTGGATAGCTGGCTGCAATACGCGTGGTTTAGCAATGATGTTTCCGAACAAGAAGATGGCACAGATCATTACCACTCGTCGGGGATTATCGCCTCGCTGGAGGCGGGGTATCAGTGGTTACCGGGGCGTGGTGTGGTGATTGAACCGCAGGCGCAGGTGATTTATCAGGGCGTGCAGCAGGATGATTTTACCGCCGCTAACCGTGCGCGCGTGTCACAATCGCAGGGTGATGATATTCAGACGCGGCTGGGTTTACACAGCGAATGGCGTACCGCTGTTCATGTCATACCAACATTAGATCTGAATTATTATCACGATCCCCATTCGACGGAAATTGAAGAGGATGGCAGCACTATCAGTGACGATGCGGTGAAGCAACGGGGTGAAATAAAAGTGGGAGTCACGGGCAATATCAGTCAGCGAGTGTCCCTGCGCGGCAGCGTGGCGTGGCAGAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAA", 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"MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW", + "protein_translation_length": 1250, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "nrdA" + ], + [ + "gene_synonym", + "NP_416737.1" + ], + [ + "gene_synonym", + "JW2228" + ], + [ + "gene_synonym", + "EcoGene:EG10660" + ], + [ + "gene_synonym", + "GeneID:946612" + ], + [ + "gene_synonym", + "ECK2226" + ], + [ + "gene_synonym", + "GI:16130169" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00452" + ], + [ + "gene_synonym", + "dnaF" + ], + [ + "gene_synonym", + "ASAP:ABE-0007383" + ], + [ + "gene_synonym", + "b2234" + ] + ], + "dna_sequence": 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"MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45505" + ], + [ + "gene_synonym", + "EcoGene:EG12881" + ], + [ + "gene_synonym", + "GeneID:946718" + ], + [ + "gene_synonym", + "JW2232" + ], + [ + "gene_synonym", + "ECK2230" + ], + [ + "gene_synonym", + "b2238" + ], + [ + "gene_synonym", + "ASAP:ABE-0007397" + ], + [ + "gene_synonym", + "yfaH" + ] + ], + "dna_sequence": "CAGATAAAATGTGAATTTAATCAGGCGGATACAGCGATGAATTTTATTCGACAGGGATTAGGCATCGCCTTACAACCAGAGTTAACGCTGAAAAGCATTGCAGGTGAATTGTGTTCCGTTCCTCTCGAACCAACTTTCTATCGACAGATTTCGTTGCTGGCTAAAGAAAAGCCGGTAGAAGGCAGTCCACTGTTTTTACTACAAATGTGCATGGAACAATTAGTGGCGATTGGAAAAATTTGA", + "dna_sequence_length": 243, + "id": "CDS_2221", + "location": [ + [ + "NC_000913", 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], + [ + "gene_synonym", + "ECK2232" + ], + [ + "gene_synonym", + "NP_416743.1" + ], + [ + "gene_synonym", + "b2240" + ], + [ + "gene_synonym", + "ASAP:ABE-0007401" + ], + [ + "gene_synonym", + "EcoGene:EG10401" + ] + ], + "dna_sequence": "ATGTTGAGTATTTTTAAACCAGCGCCACACAAAGCGCGCTTACCTGCCGCGGAGATCGATCCGACTTATCGTCGATTGCGCTGGCAAATTTTCCTGGGGATATTCTTTGGCTATGCGGCTTACTATTTGGTTCGTAAGAACTTTGCGCTTGCTATGCCTTATCTGGTTGAGCAGGGATTCTCACGCGGTGATTTAGGTTTTGCCCTTTCGGGGATCTCGATTGCTTATGGATTTTCGAAATTCATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGTGATGTTTGTACTGTTGTTCCTCTGCGGTTGGTTCCAGGGGATGGGGTGGCCGCCGTGTGGTCGTACTATGGTGCACTGGTGGTCGCAGAAAGAACGTGGCGGCATTGTGTCAGTGTGGAACTGTGCGCACAACGTCGGTGGTGGTATTCCGCCGCTGCTGTTCCTGCTGGGGATGGCCTGGTTCAATGACTGGCATGCGGCGCTCTATATGCCTGCTTTCTGCGCCATTCTGGTGGCATTATTCGCCTTTGCGATGATGCGCGATACCCCGCAATCCTGTGGCTTGCCGCCGATCGAAGAGTACAAAAATGATTATCCGGACGACTATAACGAAAAAGCGGAACAGGAGCTGACGGCGAAGCAAATCTTCATGCAGTACGTACTGCCGAACAAACTGCTGTGGTATATCGCCATCGCCAACGTGTTCGTTTATCTGCTGCGTTACGGCATCCTCGACTGGTCACCGACTTATCTGAAAGAGGTTAAGCATTTCGCGCTAGATAAATCCTCCTGGGCCTACTTCCTTTATGAATATGCAGGTATTCCGGGCACTCTGCTGTGCGGCTGGATGTCGGATAAAGTCTTCCGTGGCAACCGTGGGGCAACCGGCGTTTTCTTTATGACACTGGTGACCATCGCGACTATCGTTTACTGGATGAACCCGGCAGGTAACCCAACCGTCGATATGATTTGTATGATTGTTATCGGCTTCCTGATCTACGGTCCTGTGATGCTGATCGGTCTGCATGCGCTGGAACTGGCACCGAAAAAAGCGGCAGGTACGGCAGCGGGCTTTACCGGGCTGTTTGGTTACCTGGGCGGTTCGGTGGCGGCGAGCGCGATTGTTGGCTACACCGTGGACTTCTTCGGCTGGGATGGCGGCTTTATGGTAATGATTGGCGGCAGCATTCTGGCGGTTATCTTGTTGATTGTTGTGATGATTGGCGAAAAACGTCGCCATGAACAATTACTGCAAGAACGCAACGGAGGCTAA", 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aldolase" + ], + "id": "CDS_2229", + "location": [ + [ + "NC_000913", + 2358845, + "-", + 804 + ] + ], + "md5": "77c73d1f444f00d902bd6d46db281b03", + "parent_gene": "", + "protein_md5": "e91610c3c11c3cb4105ed928db5f1743", + "protein_translation": "MNALLSNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY", + "protein_translation_length": 267, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yfaV" + ], + [ + "gene_synonym", + "GeneID:945796" + ], + [ + "gene_synonym", + "ECK2239" + ], + [ + "gene_synonym", + "b2246" + ], + [ + "gene_synonym", + "GI:90111406" + ], + [ + "gene_synonym", + "rhmT" + ], + [ + "gene_synonym", + "ASAP:ABE-0007433" + ], + [ + "gene_synonym", + "EcoGene:EG14084" + ], + [ + "gene_synonym", + "NP_416749.4" + ], + [ + "gene_synonym", + 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"UniProtKB/Swiss-Prot:P76473" + ], + [ + "gene_synonym", + "ASAP:ABE-0007464" + ], + [ + "gene_synonym", + "EcoGene:EG14093" + ], + [ + "gene_synonym", + "JW2251" + ], + [ + "gene_synonym", + "ECK2250" + ] + ], + "dna_sequence": 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"ATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCGCAGAATATATAAAAGAGGTCTTTGTCAGTAGCGGTGCCAGAGTTACCTCGCAGGACGTCCCCATTACGGGTGGCCCCTACAAAAACATTGTTGCTGATTATGGTCCTGCCGATGGACCGCTGATTATTATTGGTGCGCATTATGACTCTGCCAGCAGTTATGAAAACGATCAATTGACCTATACGCCGGGCGCGGATGATAACGCCAGCGGTGTGGCAGGATTACTCGAACTGGCACGTTTGTTACATCAGCAAGTACCGAAAACAGGCGTGCAGCTGGTCGCCTATGCGTCGGAAGAACCGCCCTTCTTTCGTAGCGATGAAATGGGGAGCGCGGTGCATGCAGCTTCGCTTGAGCGTCCAGTGAAATTAATGATAGCACTGGAGATGATTGGCTATTACGACTCTGCGCCTGGAAGCCAGAATTACCCTTACCCGGCAATGTCCTGGCTTTATCCCGATCGGGGAGACTTTATTGCCGTGGTCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGGTTTATTCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAA", + "dna_sequence_length": 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"MGMIGYFAEIDSEKINQLLESTEKPLMDNIHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLEDGIDGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIVG", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b2273" + ], + [ + "gene_synonym", + "NP_416776.1" + ], + [ + "gene_synonym", + "yfbN" + ], + [ + "gene_synonym", + "ECK2267" + ], + [ + "gene_synonym", + "GeneID:946748" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76484" + ], + [ + "gene_synonym", + "ASAP:ABE-0007511" + ], + [ + "gene_synonym", + "EcoGene:EG14098" + ], + [ + "gene_synonym", + "JW2268" + ], + [ + "gene_synonym", + "GI:16130208" + ] + ], + "dna_sequence": "ATGGAATGGTTAAGTGAAATTCGTAAACTTCGGAAGAACGTACCTGTCGGTATCCAGGTTGCCAGACGTTTGTTAGAGAGGACTGGCGGTGATGTTGATGAAGCCATCAAGTTGTTTCATATTGACCAAATCAATATATTGACGGCAAAAGCAGACGTCACTCATCAGGAAGCAGAGAATGTTTTGTTGGCTACAAACTATGATATTGCAGAAGCTCTTCGGCGTATTGATGAACAACGCTATACACTGACGGAATTGATTTTGCGTAAAAATAAGGATGCCGGAGATGCCTTAAACAATATAGCATTGGCGATTGAATATGAGTGGGATCTCAAGCGTAAGTTTTGGTTTGGTTTTGCAGATATCCAATTATTACCGCCAGTTTTACAAACATTTATGCTGGTTTATGAATGGCATGAATATGTTGGTTGGGAAGGAATGGAGTGTGGGATATTTTTTGAAAGTGATCATACTCACCAGCAATTGCAAGCTTTGGGGTTATTAGAACTCGCCCAAAAAATGGTTACTGCAAGAATCCGATATGATGAGCTAAAAGACAAGGCCGAAAATTTTCACGAGATTACAGAGGATGACATATTCAAAATGCTTATAATACATTGTGACCAACTTGCAAGAGAGGTTGATTCTATATTACTGCAATTTGTGAAGGACAATATTGATGTTTTCCCGTGTCGCCATAACAGACACGAGTTATAA", + "dna_sequence_length": 717, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2258", + "location": [ + [ + "NC_000913", + 2388426, + "-", + 717 + ] + ], + "md5": "1820b4e2640d985df2d105bd78534c29", + "parent_gene": "", + "protein_md5": 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+ ], + [ + "gene_synonym", + "NP_416778.2" + ], + [ + "gene_synonym", + "b2275" + ], + [ + "gene_synonym", + "EcoGene:EG14100" + ], + [ + "gene_synonym", + "ECK2269" + ], + [ + "gene_synonym", + "JW2270" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76486" + ], + [ + "gene_synonym", + "GI:345452721" + ], + [ + "gene_synonym", + "yfbP" + ], + [ + "gene_synonym", + "ASAP:ABE-0007524" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:946753" + ], + [ + "gene_synonym", + "b2284" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31979" + ], + [ + "gene_synonym", + "EcoGene:EG11774" + ], + [ + "gene_synonym", + "ASAP:ABE-0007545" + ], + [ + "gene_synonym", + "nuoB" + ], + [ + "gene_synonym", + "ECK2278" + ], + [ + "gene_synonym", + "nuoF" + ], + [ + "gene_synonym", + "NP_416787.1" + ], + [ + "gene_synonym", + "GI:16130219" + ], + [ + "gene_synonym", + "JW2279" + ] + ], + "dna_sequence": 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501 + ] + ], + "md5": "8da56d6c06ae2f62478472a3eac894b8", + "parent_gene": "", + "protein_md5": "f71f2fb7813aea0d11f312f70d3c5464", + "protein_translation": "MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQKQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPELLERYK", + "protein_translation_length": 166, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007549" + ], + [ + "gene_synonym", + "b2286" + ], + [ + "gene_synonym", + "JW5375" + ], + [ + "gene_synonym", + "ECK2280" + ], + [ + "gene_synonym", + "GeneID:946759" + ], + [ + "gene_synonym", + "nuoC" + ], + [ + "gene_synonym", + "NP_416789.2" + ], + [ + "gene_synonym", + "EcoGene:EG12084" + ], + [ + "gene_synonym", + "nuoD" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33599" + ], + [ + "gene_synonym", + "GI:145698291" + ], + [ + "gene_synonym", + "nuoCD" + ] + ], + "dna_sequence": 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"MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDEI", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFC3" + ], + [ + "gene_synonym", + "GI:49176207" + ], + [ + "gene_synonym", + "ASAP:ABE-0007553" + ], + [ + "gene_synonym", + "NP_416791.3" + ], + [ + "gene_synonym", + "ECK2282" + ], + [ + "gene_synonym", + "b2288" + ], + [ + "gene_synonym", + "nuoA" + ], + [ + "gene_synonym", + "EcoGene:EG12082" + ], + [ + "gene_synonym", + "GeneID:946764" + ], + [ + "gene_synonym", + "JW2283" + ] + ], + "dna_sequence": 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[ + [ + "gene_synonym", + "JW5376" + ], + [ + "gene_synonym", + "ASAP:ABE-0007567" + ], + [ + "gene_synonym", + "GI:90111414" + ], + [ + "gene_synonym", + "b2293" + ], + [ + "gene_synonym", + "NP_416796.2" + ], + [ + "gene_synonym", + "GeneID:946777" + ], + [ + "gene_synonym", + "EcoGene:EG14104" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77625" + ], + [ + "gene_synonym", + "ECK2287" + ], + [ + "gene_synonym", + "yfbT" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_416823.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05459" + ], + [ + "gene_synonym", + "ASAP:ABE-0007663" + ], + [ + "gene_synonym", + "JW2317" + ] + ], + "dna_sequence": 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"GTGAAACACTACTCCATACAACCTGCCAACCTCGAATTTAATGCTGAGGGTACACCTGTTTCCCGAGATTTTGACGATGTCTATTTTTCCAACGATAACGGGCTGGAAGAGACGCGTTATGTTTTTCTGGGAGGCAACCAATTAGAGGTACGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGATTAAACTTCCTGACGCTATGGCAGGCATTTGATCAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGAAATTTCCCCTCACCCGTGCGGATTTAGCCTTAGCGCATCAACACTGGCCGGAACTGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACGCTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTGGACGGCTTTGCGCCAGCGAAAAACCCGGATATGTGGACGCAAAATCTGTTTAACGCCATGGCAAGGTTGGCGCGTCCGGGCGGCACGCTGGCGACATTTACGTCTGCCGGTTTTGTCCGCCGCGGTTTGCAGGACGCCGGATTCACGATGCAAAAACGTAAGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGGGGCGCTGTATCCGTTATTAAGCAAACACGATGAGGCGCTAAACCGCTTTTTCTCTAATGCGTTTACTTTTGCTCGTCGGTTTTACGACCAATTACCCGTTAAATTTGATCATGACTGGTGCGGCGTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCAATGGATTTACCCGCAGAACTGGCTGTAGCCGTTGAGGCAAATGCGGTTGAACAAATTACGGGCGTTGCGACAAATTGCAGCGGCATTACTTATCCGCAAGGTGGTTGGCTGTGCCCAGCAGAACTGACCCGTAATGTGCTGGAACTGGCGCAACAGCAGGGTTTGCAGATTTATTATCAATATCAGTTACAGAATTTATCCCGTAAGGATGACTGTTGGTTGTTGAATTTTGCAGGAGATCAGCAAGCAACACACAGCGTAGTGGTACTGGCGAACGGGCATCAAATCAGCCGATTCAGCCAAACGTCGACTCTCCCGGTGTATTCGGTTGCCGGGCAGGTCAGCCATATTCCGACAACGCCGGAATTGGCAGAGCTGAAGCAGGTGCTGTGCTATGACGGTTATCTCACGCCACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGATACGGCGTACAGTGAGGACGATCAGCAGCAGAATCGCCAGCGGTTGATTGATTGTTTCCCGCAGGCACAGTGGGCAAAAGAGGTTGATGTCAGTGATAAAGAGGCGCGCTGCGGTGTGCGTTGTGCCACCCGCGATCATCTGCCAATGGTAGGCAATGTTCCCGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTTATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCGATTCCGATGGATGCCAGTACGCTGGCGGCGTTAAACCCGAATCGGTTATGGGTGCGGAAATTGTTGAAGGGTAAAGCGGTTAAGGCGGGGTAA", 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"GI:16130261" + ], + [ + "gene_synonym", + "NP_416829.1" + ], + [ + "gene_synonym", + "yfcM" + ], + [ + "gene_synonym", + "ASAP:ABE-0007686" + ], + [ + "gene_synonym", + "EcoGene:EG14116" + ], + [ + "gene_synonym", + "GeneID:946807" + ], + [ + "gene_synonym", + "JW5381" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76938" + ], + [ + "gene_synonym", + "b2326" + ], + [ + "gene_synonym", + "epmC" + ], + [ + "gene_synonym", + "ECK2320" + ] + ], + "dna_sequence": 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"gene_synonym", + "UniProtKB/Swiss-Prot:P39199" + ], + [ + "gene_synonym", + "EcoGene:EG12449" + ], + [ + "gene_synonym", + "NP_416833.4" + ], + [ + "gene_synonym", + "GeneID:946805" + ], + [ + "gene_synonym", + "ECK2324" + ] + ], + "dna_sequence": 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"gene_synonym", + "yfcZ" + ], + [ + "gene_synonym", + "JW2340" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD33" + ], + [ + "gene_synonym", + "NP_416845.2" + ], + [ + "gene_synonym", + "EcoGene:EG14129" + ], + [ + "gene_synonym", + "ECK2337" + ], + [ + "gene_synonym", + "b2343" + ] + ], + "dna_sequence": "ATGAGTAAATGTAGTGCTGATGAAACCCCGGTTTGCTGCTGTATGGATGTTGGCACCATTATGGACAACTCCGACTGCACCGCGTCTTACAGCCGCGTGTTTGCAAACCGCGCAGAAGCAGAGCAAACGCTGGCGGCGCTGACTGAAAAAGCCCGTAGCGTGGAATCTGAACCTTGCAAAATCACCCCGACTTTCACTGAAGAGTCTGACGGTGTGCGCCTGGATATCGATTTCACTTTTGCCTGCGAAGCTGAAATGCTGATTTTCCAGCTGGGTCTGCGTTAA", + "dna_sequence_length": 285, + "functions": [ + "UPF0381 family protein" + ], + "id": "CDS_2327", + "location": [ + [ + "NC_000913", + 2460934, + "-", + 285 + ] + ], + "md5": "17fe970ca8af4702ba1b0d606977df56", + "parent_gene": "", + "protein_md5": "1de40c116bd26f06f23127c4d2cb796e", + "protein_translation": 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"gene_synonym", + "NP_416847.1" + ], + [ + "gene_synonym", + "GI:16130278" + ], + [ + "gene_synonym", + "JW2342" + ], + [ + "gene_synonym", + "ASAP:ABE-0007743" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76505" + ], + [ + "gene_synonym", + "ECK2339" + ], + [ + "gene_synonym", + "b2345" + ] + ], + "dna_sequence": 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"ATGAAGATATCTCTTGTAGTTCCTGTCTTCAATGAAGAAGAAGCGATACCAATTTTTTATAAAACGGTACGTGAATTCGAAGAATTGAAGTCATATGAAGTGGAAATCGTTTTCATAAATGACGGCAGCAAAGACGCTACGGAGTCAATCATTAATGCTCTGGCTGTTTCAGATCCTCTAGTTGTTCCGCTGTCATTTACACGCAACTTTGGTAAAGAACCAGCATTGTTTGCAGGGTTAGACCATGCAACCGGGGATGCGATAATCCCAATTGATGTTGACCTGCAAGACCCGATTGAGGTTATTCCTCATCTTATTGAAAAATGGCAAGCAGGTGCTGATATGGTTCTTGCTAAAAGATCTGACCGCTCAACTGATGGACGCCTGAAGCGAAAAACGGCTGAGTGGTTCTATAAGCTCCACAATAAAATAAGCAATCCTAAAATTGAAGAGAATGTTGGTGATTTCAGGCTGATGAGCCGTGATGTTGTCGAAAATATTAAACTTATGCCAGAACGAAACCTTTTCATGAAAGGTATTCTGAGCTGGGTAGGAGGAAAGACAGATATTGTTGAATACGTGCGAGCGGAAAGAATTGCTGGAGATACAAAATTTAATGGATGGAAACTTTGGAATTTAGCACTTGAGGGTATTACAAGCTTTTCCACATTCCCTCTTCGCATCTGGACATACATAGGGTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTGTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGA", + "dna_sequence_length": 921, + "functions": [ + "CPS-53 (KpLE1) prophage", 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activator", + "autorepressor" + ], + "id": "CDS_2349", + "location": [ + [ + "NC_000913", + 2477629, + "-", + 936 + ] + ], + "md5": "febf1ace450f95e39c4f6f11af3edcd6", + "parent_gene": "", + "protein_md5": "c38fa069b5c0c42353215cd2ad1e7c5d", + "protein_translation": "MEPLREIRNRLLNGWQLSKMHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQLFVRSHRKVELTHEGKRVYWALKSSLDTLNQEILDIKNQELSGTLTLYSRPSIAQCWLVPALGDFTRRYPSISLTVLTGNDNVNLQRAGIDLAIYFDDAPSAQLTHHFLMDEEILPVCSPEYAQRHALTNTVINLCHCTLLHDRQAWSNDSGTDEWHSWAQHYAVNLPTSSGIGFDRSDLAVIAAMNHIGVAMGRKRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGRQWPKIEAFIIWLREQVKTTS", + "protein_translation_length": 311, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007801" + ], + [ + "gene_synonym", + "b2365" + ], + [ + "gene_synonym", + "ECK2361" + ], + [ + "gene_synonym", + "yfdA" + ], + [ + "gene_synonym", + "NP_416866.1" + ], + [ + "gene_synonym", + "dsdC" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08555" + ], + [ + "gene_synonym", + "GI:16130297" + ], 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"ATGCACTCTCAAATCTGGGTTGTGAGCACGCTGCTTATCAGCATCGTGTTAATTGTACTGACCATCGTGAAGTTCAAATTCCACCCGTTTCTGGCGCTGTTGCTGGCCAGCTTCTTCGTGGGAACGATGATGGGCATGGGGCCACTGGATATGGTAAATGCTATTGAAAGTGGAATTGGCGGAACGCTGGGGTTCCTCGCAGCGGTTATCGGCCTTGGCACGATACTGGGAAAAATGATGGAAGTATCCGGGGCCGCAGAAAGAATTGGTCTGACACTTCAACGCTGCCGCTGGCTTTCAGTTGATGTCATTATGGTGCTGGTTGGCCTGATTTGTGGCATCACGCTGTTTGTTGAAGTGGGCGTCGTGCTATTGATTCCTCTGGCTTTTTCAATTGCCAAAAAAACCAATACCTCATTATTAAAGCTTGCCATTCCGCTATGTACCGCATTGATGGCAGTGCACTGCGTGGTTCCTCCACATCCGGCTGCTTTATATGTTGCCAATAAGCTGGGCGCAGATATCGGTTCGGTGATCGTCTACGGTTTGCTGGTTGGGCTGATGGCATCACTGATCGGTGGCCCACTTTTCCTTAAATTTCTGGGTCAACGACTGCCCTTTAAACCTGTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACGATGCTCACACATACGGAAAATGGCTTCGGTTCTATTGCTAATATTTTGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGTCTCGCTGATACGCTGGCAGTTATTCTCTCCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCACCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGGCGCTACGCTCAATGAAACATTTAAATACTATACGACAGCGACATTTATCGCTTCAGTCGTCGCTCTGGCGGGCACATTCCTGCTGTCATTTATCATCTAA", 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"ASAP:ABE-0007804" + ], + [ + "gene_synonym", + "ECK2362" + ], + [ + "gene_synonym", + "dsdA" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00926" + ], + [ + "gene_synonym", + "NP_416867.1" + ], + [ + "gene_synonym", + "EcoGene:EG10249" + ], + [ + "gene_synonym", + "JW2363" + ] + ], + "dna_sequence": "ATGGAAAACGCTAAAATGAACTCGCTCATCGCCCAGTATCCGTTGGTAAAGGATCTGGTTGCTCTTAAAGAAACCACCTGGTTTAATCCTGGCACGACCTCATTGGCTGAAGGTTTACCTTATGTTGGCCTGACCGAACAGGATGTTCAGGACGCCCATGCGCGCTTATCCCGTTTTGCACCCTATCTGGCAAAAGCATTTCCTGAAACTGCTGCCACTGGGGGGATTATTGAATCAGAACTGGTTGCCATTCCAGCTATGCAAAAACGGCTGGAAAAAGAATATCAGCAACCGATCAGCGGGCAACTGTTACTGAAAAAAGATAGCCATTTGCCCATTTCCGGCTCCATAAAAGCACGCGGCGGGATTTATGAAGTCCTGGCACACGCAGAAAAACTGGCTCTGGAAGCGGGGTTGCTGACGCTTGATGATGACTACAGCAAACTGCTTTCTCCGGAGTTTAAACAGTTCTTTAGCCAATACAGCATTGCTGTGGGCTCAACCGGAAATCTGGGGTTATCAATCGGCATTATGAGCGCCCGCATTGGCTTTAAGGTGACAGTTCATATGTCTGCTGATGCCCGGGCATGGAAAAAAGCGAAACTGCGCAGCCATGGCGTTACGGTCGTGGAATATGAGCAAGATTATGGTGTTGCCGTCGAGGAAGGACGTAAAGCAGCGCAGTCTGACCCGAACTGTTTCTTTATTGATGACGAAAATTCCCGCACGTTGTTCCTTGGGTATTCCGTCGCTGGCCAGCGTCTTAAAGCGCAATTTGCCCAGCAAGGCCGTATCGTCGATGCTGATAACCCTCTGTTTGTCTATCTGCCGTGTGGTGTTGGCGGTGGTCCTGGTGGCGTCGCATTCGGGCTTAAACTGGCGTTTGGCGATCATGTTCACTGCTTTTTTGCCGAACCAACGCACTCCCCTTGTATGTTGTTAGGCGTCCATACAGGATTACACGATCAGATTTCTGTTCAGGATATTGGTATCGACAACCTTACCGCAGCGGATGGCCTTGCAGTTGGTCGCGCATCAGGCTTTGTCGGGCGGGCAATGGAGCGTCTGCTGGATGGCTTCTATACCCTTAGCGATCAAACCATGTATGACATGCTTGGCTGGCTGGCGCAGGAAGAAGGTATTCGTCTTGAACCTTCGGCACTGGCGGGTATGGCCGGACCTCAGCGCGTGTGTGCATCAGTAAGTTACCAACAGATGCACGGTTTCAGCGCAGAACAACTGCGTAATACCACTCATCTGGTGTGGGCGACGGGAGGTGGAATGGTGCCGGAAGAAGAGATGAATCAATATCTGGCAAAAGGCCGTTAA", 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"gene_synonym", + "ASAP:ABE-0007806" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52600" + ], + [ + "gene_synonym", + "JW2364" + ], + [ + "gene_synonym", + "EcoGene:EG13283" + ], + [ + "gene_synonym", + "GI:16130299" + ], + [ + "gene_synonym", + "NP_416868.1" + ] + ], + "dna_sequence": "ATGGCAATCACTAAATCAACTCCGGCACCATTAACCGGTGGGACGTTATGGTGCGTCACTATTGCATTGTCATTAGCGACATTTATGCAAATGTTGGATTCCACTATTTCTAACGTCGCAATACCGACAATATCTGGCTTTCTGGGAGCATCAACAGACGAAGGCACCTGGGTTATCACCTCGTTTGGTGTAGCAAATGCCATTGCGATCCCTGTTACTGGCAGGTTGGCACAAAGAATAGGCGAATTAAGATTATTTTTACTTTCAGTCACTTTTTTTTCGCTGTCTTCATTAATGTGTAGCCTATCGACCAATCTTGATGTGCTGATATTTTTTAGAGTCGTTCAGGGGTTAATGGCGGGGCCGTTAATTCCACTGTCACAGAGTTTATTATTAAGGAATTATCCGCCAGAAAAAAGAACATTTGCTCTGGCATTATGGTCAATGACCGTGATTATCGCTCCGATATGTGGGCCGATATTGGGCGGTTATATTTGTGATAACTTTAGCTGGGGTTGGATATTTTTAATCAATGTCCCTATGGGGATTATCGTCCTGACATTATGCTTAACCTTACTTAAAGGAAGAGAAACTGAGACTTCACCGGTCAAAATGAATCTACCAGGACTGACCCTGTTAGTGCTCGGTGTTGGTGGCTTGCAAATTATGCTTGATAAAGGGCGCGATCTGGATTGGTTCAACTCGAGTACAATAATAATATTAACAGTAGTATCAGTTATTTCTCTGATCTCTTTAGTCATTTGGGAGTCGACCTCAGAGAACCCGATTCTTGATCTCAGTTTGTTTAAGTCCCGTAACTTCACCATTGGTATTGTGAGTATCACATGCGCGTATTTATTTTACTCTGGAGCGATCGTCCTTATGCCGCAGTTACTCCAGGAAACGATGGGGTATAATGCGATATGGGCCGGACTTGCTTATGCGCCCATCGGCATCATGCCACTATTAATTTCACCTTTGATAGGACGTTATGGCAACAAAATAGACATGCGGTTGTTAGTGACATTTAGTTTTTTGATGTATGCGGTTTGCTATTACTGGCGTTCTGTGACATTTATGCCAACGATTGATTTTACAGGCATCATTTTGCCGCAGTTTTTTCAGGGATTCGCCGTTGCCTGTTTCTTTTTACCCTTAACAACGATTTCGTTTTCAGGCTTGCCAGATAATAAATTTGCCAATGCCTCGAGTATGAGTAATTTTTTTCGTACCTTGTCAGGATCAGTTGGTACGTCGTTGACAATGACGCTGTGGGGACGACGCGAATCGTTACACCATAGTCAGTTGACAGCAACCATCGATCAATTTAACCCCGTGTTTAATTCATCGTCACAAATTATGGATAAATATTATGGTTCGCTTTCAGGAGTTCTTAATGAAATTAATAATGAAATAACCCAGCAGTCACTTTCTATTTCTGCAAATGAGATTTTCCGTATGGCGGCTATTGCTTTTATCTTACTTACGGTTTTGGTTTGGTTTGCGAAACCGCCGTTTACAGCGAAAGGCGTTGGGTGA", 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], + [ + "gene_synonym", + "b2368" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52599" + ], + [ + "gene_synonym", + "emrK" + ], + [ + "gene_synonym", + "EcoGene:EG13282" + ], + [ + "gene_synonym", + "GeneID:946840" + ], + [ + "gene_synonym", + "NP_416869.1" + ], + [ + "gene_synonym", + "JW2365" + ], + [ + "gene_synonym", + "GI:16130300" + ] + ], + "dna_sequence": "GTGGAACAGATTAATTCAAATAAAAAACATTCTAACAGAAGAAAATACTTTTCTTTATTGGCGGTAGTTTTATTTATTGCGTTTTCAGGTGCCTATGCCTATTGGTCAATGGAATTAGAAGACATGATTAGTACAGATGACGCCTATGTCACGGGGAATGCAGATCCAATTTCTGCACAAGTCTCAGGTAGTGTCACTGTCGTTAATCATAAAGATACGAACTACGTTCGACAAGGTGACATTTTAGTTTCACTGGATAAAACTGATGCCACTATCGCACTCAATAAAGCTAAAAATAATCTGGCAAATATTGTTCGGCAAACGAATAAACTATACTTACAGGATAAACAATACAGTGCCGAAGTCGCTTCAGCACGTATTCAGTATCAACAATCTTTAGAAGATTATAACCGTCGAGTGCCGTTAGCGAAGCAGGGGGTTATTTCAAAAGAAACGCTGGAGCATACCAAAGATACGTTAATAAGTAGCAAAGCGGCATTGAATGCCGCTATCCAGGCTTATAAAGCGAATAAAGCTTTAGTAATGAACACACCATTAAACCGTCAGCCACAAGTCGTTGAAGCGGCGGATGCAACTAAAGAAGCCTGGTTGGCGCTTAAACGTACGGATATTAAGAGTCCGGTTACCGGCTATATTGCCCAGAGAAGTGTTCAGGTCGGCGAAACAGTGAGCCCCGGACAATCGTTAATGGCTGTCGTACCGGCACGTCAAATGTGGGTTAATGCCAACTTTAAAGAAACACAACTCACGGATGTACGGATTGGTCAATCGGTCAATATTATCAGCGATCTTTATGGTGAAAATGTTGTGTTTCATGGTCGGGTGACAGGGATCAATATGGGAACCGGCAATGCGTTCTCCTTATTACCTGCACAAAATGCGACAGGGAACTGGATCAAAATCGTTCAGCGTGTACCGGTTGAAGTTTCTCTTGATCCAAAAGAACTCATGGAACACCCCTTGCGTATTGGTTTATCGATGACAGCAACTATTGATACGAAGAACGAAGACATTGCCGAGATGCCTGAGCTGGCTTCAACCGTGACCTCCATGCCGGCTTATACCAGTAAGGCTTTAGTTATCGATACCAGTCCGATAGAAAAAGAAATTAGCAACATTATTTCGCATAATGGACAACTTTAA", 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EvgS" + ], + "id": "CDS_2354", + "location": [ + [ + "NC_000913", + 2483755, + "+", + 615 + ] + ], + "md5": "2335d9ecbe4de6ae1c0184b82d9db67b", + "parent_gene": "", + "protein_md5": "0fc39431cf45f67ef9e76c9a1f225d7f", + "protein_translation": "MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKDNNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQRNKIG", + "protein_translation_length": 204, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG11610" + ], + [ + "gene_synonym", + "b2370" + ], + [ + "gene_synonym", + "ECK2366" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30855" + ], + [ + "gene_synonym", + "GeneID:946844" + ], + [ + "gene_synonym", + "evgS" + ], + [ + "gene_synonym", + "NP_416871.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0007819" + ], + [ + "gene_synonym", + "JW2367" + ], + [ + "gene_synonym", + "GI:16130302" + ] + ], + "dna_sequence": "ATGAAGTTTTTACCCTATATTTTTCTTCTCTGTTGTGGTCTTTGGTCGACCATAAGTTTCGCAGACGAAGATTACATCGAATATCGTGGCATCAGTAGTAACAACCGTGTCACACTTGATCCACTACGTCTGAGCAACAAGGAATTACGTTGGTTAGCGAGCAAAAAAAATCTTGTGATTGCAGTACATAAGTCCCAAACGGCTACGTTGTTGCATACCGATTCGCAGCAACGGGTTCGTGGTATTAATGCTGATTATTTAAATCTTTTAAAAAGAGCGTTAAATATCAAATTAACACTCCGGGAATACGCAGATCATCAAAAAGCAATGGACGCGCTTGCAGAAGGTGAAGTCGATATAGTGTTATCACATTTAGTTACTTCGCCGCCTCTTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACATCATTACCAGCAGTATGATTTCCCGCTATTTCACTCACTCCTTAAATGTAGTGAAATATTATAACTCGCCGCGTCAATATAATTTTTTCTTGACCAGAAAAGAATCTGTCATTCTTAATGAAGTACTCAATAGATTTGTTGATGCTTTAACAAATGAAGTTCGCTATGAAGTATCACAAAATTGGCTTGATACAGGAAACCTGGCCTTTCTGAACAAACCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCGCCCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGTTTAAATTTTTCTCCGATCACCGTTTCACACAATATCCATGCTGGAACACAGCTTAGCCCCGGAGGATGGGATATAATACCTGGCGCTATTTATAGTGAAGATCGAGAAAATAATGTTTTATTTGCTGAAGCCTTCATAACAACGCCTTACGTTTTTGTCATGCAAAAAGCGCCTGACAGTGAACAAACATTAAAAAAAGGAATGAAAGTTGCCATTCCATATTATTATGAGCTGCATTCGCAATTAAAAGAGATGTATCCGGAGGTTGAATGGATACAGGTCGATAATGCCAGCGCTGCATTTCACAAGGTTAAGGAAGGTGAACTTGATGCTCTGGTCGCGACACAGCTAAATTCGCGTTACATGATCGATCATTACTATCCTAATGAACTTTATCATTTTCTTATTCCTGGCGTTCCGAATGCATCGCTTTCGTTCGCTTTTCCTCGCGGAGAACCGGAACTTAAGGATATTATTAATAAAGCACTGAATGCAATTCCCCCAAGCGAAGTTCTGCGCCTGACGGAAAAATGGATTAAAATGCCCAATGTGACCATTGACACATGGGACCTATATAGCGAGCAATTTTATATTGTTACGACATTATCCGTTTTATTAGTTGGCAGTAGCCTTTTATGGGGATTCTACCTGTTACGCTCAGTTCGTCGTCGTAAAGTCATTCAGGGTGATTTAGAAAACCAAATATCATTCCGAAAAGCACTCTCGGATTCCTTACCGAATCCAACTTATGTTGTAAACTGGCAAGGTAATGTCATTAGTCATAATAGTGCTTTTGAACATTATTTCACTGCGGATTACTACAAAAATGCAATGTTACCATTAGAAAACAGTGACTCACCCTTTAAAGATGTTTTTTCTAATGCGCATGAAGTCACAGCAGAAACGAAAGAAAATCGAACAATATACACACAGGTATTTGAAATTGATAATGGCATCGAGAAAAGATGCATTAATCACTGGCATACATTATGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCTATTATGGGCTTCCTGGAACTTCTGTCGGGTTCTGGTCTTAGCAAGGAGCAACGGGTGGAGGCGATTTCACTTGCCTACGCCACCGGACAATCACTCCTCGGCTTAATTGGTGAAATCCTTGATGTCGACAAAATTGAATCGGGTAACTATCAACTTCAACCACAATGGGTCGATATCCCTACTTTAGTCCAGAACACTTGTCACTCTTTCGGTGCGATTGCTGCAAGCAAATCGATCGCATTAAGTTGCAGCAGTACGTTTCCTGAACATTACCTGGTTAAGATCGACCCTCAGGCGTTTAAGCAGGTCTTATCAAATTTACTGAGTAATGCTCTCAAATTTACCACCGAGGGGGCAGTAAAAATTACGACCTCCCTGGGTCACATTGATGACAACCACGCTGTTATCAAAATGACGATTATGGATTCTGGAAGTGGATTATCGCAGGAAGAACAACAACAACTGTTTAAACGCTACAGCCAAACAAGTGCAGGTCGTCAGCAAACAGGTTCTGGTTTAGGCTTAATGATCTGCAAAGAATTAATTAAAAATATGCAGGGCGATTTGTCATTAGAAAGTCATCCAGGCATAGGAACAACATTTACGATCACAATCCCGGTAGAAATTAGCCAGCAAGTGGCGACTGTCGAGGCAAAAGCAGAACAACCCATCACACTACCTGAAAAGTTGAGCATATTAATCGCGGATGATCATCCGACCAACAGGCTATTACTCAAACGCCAGCTAAATCTATTAGGATATGATGTTGATGAAGCCACTGATGGTGTGCAAGCGCTACACAAAGTCAGTATGCAACATTATGATCTGCTTATTACTGACGTTAATATGCCGAATATGGATGGTTTTGAGTTGACTCGCAAACTCCGTGAGCAAAATTCTTCCTTACCCATCTGGGGGCTTACAGCCAACGCACAGGCTAACGAACGTGAAAAAGGGTTAAGTTGCGGCATGAACTTATGTTTGTTCAAACCGTTGACCCTGGATGTACTGAAAACACATTTAAGTCAGTTACACCAAGTTGCGCATATTGCACCTCAGTATCGCCACCTTGATATCGAAGCCCTGAAAAATAATACGGCGAACGATCTACAACTGATGCAGGAGATTCTCATGACTTTCCAGCATGAAACGCATAAAGATCTACCCGCTGCGTTTCAAGCACTAGAAGCTGGCGATAACAGAACTTTCCATCAGTGTATTCATCGCATCCACGGTGCGGCTAACATCCTGAATTTGCAAAAGTTGATTAATATTAGCCATCAGTTAGAAATAACACCTGTTTCAGATGACAGTAAGCCTGAAATTCTTCAGTTGCTGAACTCTGTAAAAGAACACATTGCAGAGCTGGACCAGGAGATTGCTGTTTTCTGTCAGAAAAATGACTAA", + "dna_sequence_length": 3594, + "functions": [ + "hybrid sensory histidine kinase in two-component regulatory system with EvgA" + ], + "id": "CDS_2355", + "location": [ + [ + "NC_000913", + 2484374, + "+", + 3594 + ] + ], + "md5": "69c95332e4b06bbb85daad9ca12fa2e4", + "parent_gene": "", + "protein_md5": "13cc892ca9e2b99dd7c3d4c2ab23c569", + "protein_translation": "MKFLPYIFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDPLRLSNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLREYADHQKAMDALAEGEVDIVLSHLVTSPPLNNDIAATKPLIITFPALVTTLHDSMRPLTSPKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGHNDYFIGSNIITSSMISRYFTHSLNVVKYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNWLDTGNLAFLNKPLELTEHEKQWIKQHPNLKVLENPYSPPYSMTDENGSVRGVMGDILNIITLQTGLNFSPITVSHNIHAGTQLSPGGWDIIPGAIYSEDRENNVLFAEAFITTPYVFVMQKAPDSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIQVDNASAAFHKVKEGELDALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPPSEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKVIQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENSDSPFKDVFSNAHEVTAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDNAVYICGWQDITETRDLINALEVEKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIAASKSIALSCSSTFPEHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLGHIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAEQPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSSLPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDIEALKNNTANDLQLMQEILMTFQHETHKDLPAAFQALEAGDNRTFHQCIHRIHGAANILNLQKLINISHQLEITPVSDDSKPEILQLLNSVKEHIAELDQEIAVFCQKND", + "protein_translation_length": 1197, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:162135906" + ], + [ + "gene_synonym", + "ECK2367" + ], + [ + "gene_synonym", + "yfdE" + ], + [ + "gene_synonym", + "GeneID:946432" + ], + [ + "gene_synonym", + "EcoGene:EG13284" + ], + [ + "gene_synonym", + "JW2368" + ], + [ + "gene_synonym", + "NP_416872.4" + ], + [ + "gene_synonym", + "b2371" + ], + [ + "gene_synonym", + "ASAP:ABE-0007821" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76518" + ] + ], + "dna_sequence": "ATGACAAATAATGAAAGCAAAGGGCCGTTTGAAGGCTTATTAGTTATCGATATGACACATGTCCTTAATGGACCTTTCGGAACTCAACTTCTTTGTAATATGGGCGCAAGGGTAATTAAAGTTGAGCCGCCGGGTCATGGTGATGATACCCGCACATTTGGTCCCTATGTGGATGGACAGTCACTCTATTACAGTTTTATTAATCATGGCAAAGAGAGTGTGGTTCTTGATTTAAAGAATGATCACGATAAAAGTATATTTATAAATATGCTCAAACAAGCTGATGTATTAGCTGAGAATTTTCGCCCAGGTACAATGGAAAAACTGGGGTTTTCATGGGAAACGCTTCAAGAAATCAACCCGCGCCTCATATATGCTTCATCGTCAGGTTTCGGACATACCGGTCCGCTAAAAGATGCTCCTGCCTACGATACCATCATTCAGGCAATGAGCGGGATAATGATGGAAACAGGATATCCTGATGCTCCGCCAGTGCGCGTTGGTACATCTCTTGCGGATCTATGCGGCGGTGTCTATTTATTCAGCGGAATAGTGAGTGCACTTTATGGCCGCGAAAAGAGCCAGAGAGGGGCGCATGTCGATATAGCGATGTTTGATGCCACGCTGAGTTTTCTGGAGCATGGTCTGATGGCATATATCGCAACTGGGAAGTCACCACAACGTCTGGGAAATCGCCATCCCTACATGGCACCTTTTGATGTTTTCAATACTCAGGATAAGCCGATTACGATTTGTTGTGGTAATGACAAGCTTTTTTCTGCGTTATGCCAGGCACTGGAGCTTACGGAACTGGTTAATGATCCCCGATTTAGCAGCAATATTTTACGCGTACAAAACCAGGCTATTCTTAAACAATATATTGAGCGGACGTTAAAAACGCAGGCAGCTGAAGTTTGGTTAGCCAGAATACATGAAGTTGGTGTACCCGTCGCGCCGTTATTAAGTGTGGCTGAGGCCATTAAATTGCCACAAACTCAGGCGAGAAATATGTTGATTGAAGCCGGGGGAATAATGATGCCGGGTAATCCGATAAAAATCAGCGGCTGCGCGGACCCGCATGTTATGCCGGGAGCGGCAACGCTCGACCAGCATGGGGAACAAATTCGCCAGGAGTTCTCATCATAA", + "dna_sequence_length": 1146, + "functions": [ + "acetyl-CoA:oxalate CoA-transferase" + ], + "id": "CDS_2356", + "location": [ + [ + "NC_000913", + 2489168, + "-", + 1146 + ] + ], + "md5": "a57b387fe76f55abd350c2f1cc3aa4b6", + "parent_gene": "", + "protein_md5": "8155697a9afcb04958b3261f25646398", + "protein_translation": "MTNNESKGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAPPVRVGTSLADLCGGVYLFSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMAYIATGKSPQRLGNRHPYMAPFDVFNTQDKPITICCGNDKLFSALCQALELTELVNDPRFSSNILRVQNQAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQARNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEFSS", + "protein_translation_length": 381, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yfdV" + ], + [ + "gene_synonym", + "NP_416873.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA49" + ], + [ + "gene_synonym", + "ECK2368" + ], + [ + "gene_synonym", + "GeneID:949110" + ], + [ + "gene_synonym", + "JW2369" + ], + [ + "gene_synonym", + "b2372" + ], + [ + "gene_synonym", + "GI:16130304" + ], + [ + "gene_synonym", + "EcoGene:EG14144" + ], + [ + "gene_synonym", + "ASAP:ABE-0007824" + ] + ], + "dna_sequence": "ATGCTAACATTTTTTATTGGCGATTTATTGCCTATTATCGTAATCATGCTGTTGGGTTATTTTAGCGGCAGACGAGAAACATTTTCAGAAGATCAAGCTCGGGCATTTAATAAACTGGTATTAAACTACGCGCTTCCTGCGGCTCTATTTGTATCTATTACTCGGGCAAACAGGGAAATGATTTTTGCGGACACTCGTCTGACCCTTGTATCACTTGTGGTTATTGTCGGATGTTTCTTTTTCTCCTGGTTCGGTTGCTACAAATTTTTTAAACGTACCCATGCAGAAGCAGCTGTATGTGCATTAATTGCAGGTTCACCTACCATTGGATTCCTGGGGTTTGCAGTTCTCGATCCTATTTATGGTGATTCCGTATCAACAGGTTTAGTGGTAGCAATTATTTCTATTATTGTTAACGCAATTACTATTCCTATTGGTCTGTATTTGCTGAATCCTTCTTCAGGAGCGGATGGTAAGAAGAATAGTAATCTGAGCGCATTAATTTCTGCGGCAAAGGAGCCAGTAGTATGGGCACCTGTTCTGGCAACGATCCTGGTGTTGGTTGGGGTAAAAATTCCGGCAGCATGGGACCCAACCTTTAATCTGATTGCGAAGGCTAACTCAGGGGTAGCGGTATTCGCTGCGGGGTTGACTCTGGCTGCACATAAATTCGAGTTCAGTGCCGAAATTGCTTATAACACCTTCCTGAAGCTGATTCTGATGCCACTGGCACTGCTTCTCGTTGGTATGGCATGTCATTTGAACAGCGAACATCTGCAGATGATGGTACTGGCAGGCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCATTGGCTGTGAGCGTACTGGGCTTTGTCGTCACGGCTCCCTTGTGGATTTATGTCAGTCGACTGGTTTCATAA", + "dna_sequence_length": 945, + "functions": [ + "putative transporter" + ], + "id": "CDS_2357", + "location": [ + [ + "NC_000913", + 2490186, + "-", + 945 + ] + ], + "md5": "403b703baa3671936b64f06eb546d880", + "parent_gene": "", + "protein_md5": "7e0148b9955b55d6cbdc9ebbfda702b9", + "protein_translation": "MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYALPAALFVSITRANREMIFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCALIAGSPTIGFLGFAVLDPIYGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKKNSNLSALISAAKEPVVWAPVLATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLTLAAHKFEFSAEIAYNTFLKLILMPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGIIIASRFNVYTRTGTASLAVSVLGFVVTAPLWIYVSRLVS", + "protein_translation_length": 314, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFI0" + ], + [ + "gene_synonym", + "ECK2369" + ], + [ + "gene_synonym", + "yfdU" + ], + [ + "gene_synonym", + "GeneID:946845" + ], + [ + "gene_synonym", + "NP_416874.1" + ], + [ + "gene_synonym", + "b2373" + ], + [ + "gene_synonym", + "GI:16130305" + ], + [ + "gene_synonym", + "JW2370" + ], + [ + "gene_synonym", + "EcoGene:EG14143" + ], + [ + "gene_synonym", + "ASAP:ABE-0007826" + ], + [ + "gene_synonym", + "oxc" + ] + ], + "dna_sequence": "ATGTCAGATCAACTTCAAATGACAGATGGTATGCATATCATCGTTGAAGCATTAAAACAGAATAATATTGACACTATTTATGGTGTTGTAGGTATTCCTGTGACGGATATGGCACGCCATGCCCAGGCGGAAGGCATTCGTTATATTGGTTTTCGTCATGAGCAGTCGGCAGGCTATGCCGCTGCGGCAAGCGGTTTTCTTACCCAAAAACCGGGGATCTGCCTGACAGTTTCTGCGCCAGGATTCCTCAATGGTTTGACCGCATTGGCCAACGCAACGGTAAATGGTTTTCCGATGATCATGATTAGCGGCTCCAGCGACCGCGCGATCGTCGACCTACAGCAAGGTGATTATGAAGAGCTGGACCAAATGAATGCGGCAAAACCGTATGCCAAAGCAGCATTTCGCGTTAATCAGCCGCAGGATCTTGGCATTGCATTGGCACGCGCTATCCGGGTCTCTGTATCGGGTCGCCCTGGCGGAGTTTATCTTGATTTGCCAGCAAATGTCCTGGCCGCGACGATGGAAAAAGACGAAGCGTTAACCACGATTGTTAAAGTTGAAAATCCGTCGCCAGCATTATTGCCATGCCCGAAGTCAGTCACTAGCGCAATTTCGCTTTTAGCAAAAGCTGAACGGCCATTAATTATCCTTGGCAAAGGCGCGGCGTATTCACAAGCTGATGAACAGCTTCGTGAATTTATTGAAAGTGCTCAGATTCCATTCCTGCCAATGTCTATGGCGAAAGGGATCCTTGAAGATACGCATCCACTTTCTGCGGCAGCTGCGCGTTCGTTTGCCCTGGCAAATGCTGACGTTGTCATGCTTGTTGGTGCACGACTGAATTGGTTATTGGCACACGGTAAAAAAGGATGGGCGGCAGATACACAGTTTATTCAACTGGATATTGAACCGCAGGAAATTGACAGCAACCGCCCCATTGCTGTGCCAGTCGTTGGTGATATTGCATCCAGTATGCAAGGTATGCTGGCAGAACTGAAACAAAACACATTTACGACTCCACTGGTATGGCGCGATATTTTAAATATCCACAAGCAGCAAAATGCACAAAAAATGCATGAAAAATTAAGTACAGATACTCAACCATTAAATTACTTTAATGCATTAAGTGCTGTGCGCGACGTATTGCGCGAGAACCAGGATATTTATTTAGTTAATGAAGGTGCAAATACCCTGGATAATGCACGAAATATTATTGATATGTATAAACCACGTCGTCGTCTGGATTGTGGTACCTGGGGTGTCATGGGCATCGGTATGGGCTATGCCATCGGTGCTAGCGTGACTTCTGGTTCTCCGGTTGTCGCCATTGAAGGTGATAGTGCTTTTGGTTTCAGTGGGATGGAAATTGAAACGATTTGTCGATATAACCTGCCGGTGACGATCGTTATTTTTAATAATGGCGGCATCTACAGAGGAGACGGTGTTGATCTCAGTGGCGCTGGTGCACCATCACCAACGGATCTGTTGCACCATGCAAGGTATGACAAATTAATGGATGCGTTTCGTGGCGTTGGCTATAACGTCACCACGACAGATGAACTTCGTCATGCTTTAACCACCGGTATTCAGTCGCGCAAACCGACCATTATTAATGTGGTCATCGACCCTGCAGCAGGAACTGAAAGTGGCCATATTACCAAACTTAACCCAAAACAAGTCGCTGGTAATTAA", + "dna_sequence_length": 1695, + "functions": [ + "oxalyl CoA decarboxylase, ThDP-dependent" + ], + "id": "CDS_2358", + "location": [ + [ + "NC_000913", + 2491950, + "-", + 1695 + ] + ], + "md5": "085f72ff9bb68e31ee4a81db0ff64c8a", + "parent_gene": "", + "protein_md5": "77ee9dd7abd037d9298ee614cd78d715", + "protein_translation": "MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVVGDIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQVAGN", + "protein_translation_length": 564, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + 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"ATGTCAACTCCACTTCAAGGAATTAAAGTTCTCGATTTCACCGGTGTGCAATCTGGCCCATCTTGTACTCAAATGCTGGCCTGGTTTGGCGCTGACGTTATTAAAATTGAACGTCCCGGCGTTGGTGACGTAACGCGTCACCAGCTGCGAGATATTCCTGATATCGATGCGCTTTACTTCACCATGCTTAACAGTAACAAACGTTCTATTGAGTTAAATACCAAAACAGCGGAAGGCAAAGAGGTAATGGAAAAGCTGATCCGCGAAGCTGATATCTTAGTCGAGAACTTTCATCCAGGGGCCATTGATCACATGGGCTTCACCTGGGAGCATATTCAAGAAATCAATCCACGTCTGATTTTTGGTTCGATCAAAGGGTTTGATGAGTGTTCGCCTTATGTGAATGTAAAAGCCTATGAAAACGTTGCTCAGGCAGCGGGTGGCGCGGCATCCACTACGGGTTTTTGGGATGGTCCGCCGCTGGTAAGCGCTGCAGCGTTGGGTGACAGCAACACCGGAATGCATTTGCTGATCGGTTTACTTGCTGCTTTGCTGCATCGCGAAAAAACGGGGCGTGGGCAACGAGTCACCATGTCAATGCAGGATGCCGTATTGAACCTTTGCCGCGTGAAATTACGTGACCAGCAGCGTCTCGATAAATTGGGTTATCTGGAAGAATACCCGCAGTATCCGAATGGTACATTTGGTGATGCAGTTCCCCGCGGTGGTAATGCAGGTGGTGGCGGTCAGCCTGGCTGGATCCTGAAATGTAAAGGCTGGGAAACCGATCCTAACGCCTATATTTATTTCACTATTCAGGAGCAAAACTGGGAAAACACCTGTAAAGCCATCGGCAAACCAGAATGGATTACCGATCCGGCATACAGTACAGCCCATGCACGACAGCCACATATTTTCGATATTTTTGCTGAAATCGAAAAATACACTGTCACTATTGATAAACATGAAGCGGTGGCCTATTTGACTCAGTTTGATATTCCTTGTGCACCGGTTTTAAGTATGAAAGAAATTTCACTTGATCCCTCTTTGCGCCAAAGTGGCAGTGTTGTTGAAGTGGAACAACCGTTGCGTGGAAAATATCTGACCGTTGGTTGTCCAATGAAATTCTCTGCCTTTACGCCGGATATTAAAGCTGCGCCGCTATTAGGTGAACATACCGCTGCTGTATTGCAGGAGCTGGGTTATAGCGACGATGAAATTGCTGCAATGAAGCAAAACCACGCCATCTGA", 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"ECK2394" + ], + [ + "gene_synonym", + "b2400" + ], + [ + "gene_synonym", + "JW2395" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04805" + ], + [ + "gene_synonym", + "GeneID:946906" + ], + [ + "gene_synonym", + "GI:16130330" + ], + [ + "gene_synonym", + "NP_416899.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0007911" + ], + [ + "gene_synonym", + "EcoGene:EG10407" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK2399" + ], + [ + "gene_synonym", + "b2405" + ], + [ + "gene_synonym", + "GI:16130331" + ], + [ + "gene_synonym", + "GeneID:946862" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23841" + ], + [ + "gene_synonym", + "EcoGene:EG11146" + ], + [ + "gene_synonym", + "JW2396" + ], + [ + "gene_synonym", + "xapR" + ], + [ + "gene_synonym", + "ASAP:ABE-0007922" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG20250" + ], + [ + "gene_synonym", + "GI:16130333" + ], + [ + "gene_synonym", + "ECK2401" + ], + [ + "gene_synonym", + "ASAP:ABE-0007927" + ], + [ + "gene_synonym", + "GeneID:946878" + ], + [ + "gene_synonym", + "JW2398" + ], + [ + "gene_synonym", + "pndA" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_416923.1" + ] + ], + "dna_sequence": "ATGCAATTTGAAAAGATGATTACTGAAGGCTCGAACACCGCCTCGGCTGAAATTGACCGCGTATCGACGCTGGAAATGTGCCGGATTATCAACGATGAAGATAAAACCGTACCGCTTGCCGTTGAGCGCGTACTGCCGGATATCGCCGCGGCGATCGATGTTATCCACGCCCAGGTAAGCGGCGGCGGGCGTCTGATTTACCTCGGTGCGGGAACATCCGGTCGTCTGGGGATTCTGGATGCCAGCGAATGTCCGCCCACCTACGGCGTGAAACCGGGTCTGGTGGTTGGTTTGATTGCTGGCGGCGAATATGCCATTCAGCACGCGGTGGAAGGCGCGGAAGATAGCCGGGAAGGCGGTGTTAATGATCTGAAAAATATTAATTTAACGGCACAGGATGTGGTGGTTGGCATTGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGATGGTCGATGTGGTCGCCACCAACGAAAAACTGCATGTGCGACAGGTCAATATTGTTAAAAACGCCACCGGATGTAGCGCAGAGCAAGCGGAAGCGGCGTTAATTGCTTGCGAGCGCAACTGTAAAACGGCCATTGTGATGGTGCTGAAAAATCTCGATGCCGCAGAAGCTAAAAAACGCCTGGATCAACACGGCGGCTTTATTCGTCAGGTTTTAGACAAGGAATAA", + "dna_sequence_length": 897, + 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"gene_synonym", + "yfeV" + ], + [ + "gene_synonym", + "ASAP:ABE-0008009" + ], + [ + "gene_synonym", + "murP" + ], + [ + "gene_synonym", + "EcoGene:EG14163" + ] + ], + "dna_sequence": 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"MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAIADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISYQFSGEWRGPEGLMPSDDTLKNWKVSKIIWRR", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008023" + ], + [ + "gene_synonym", + "ECK2428" + ], + [ + "gene_synonym", + "GI:90111434" + ], + [ + "gene_synonym", + "JW2426" + ], + [ + "gene_synonym", + "EcoGene:EG14167" + ], + [ + "gene_synonym", + "NP_416928.4" + ], + [ + "gene_synonym", + "b2433" + ], + [ + "gene_synonym", + "yfeZ" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76538" + ], + [ + "gene_synonym", + "GeneID:946918" + ] + ], + "dna_sequence": "ATGAAGAGTACTGAGTTTCATCCTGTCCATTATGATGCGCACGGTCGCCTGCGTTTACCCTTGCTCTTCTGGCTTGTGCTATTGCTTCAGGCGCGAACCTGGGTGCTGTTTGTCATTGCCGGTGCGTCGCGCGAGCAGGGTACTGCGCTGCTAAATCTGTTTTATCCCGATCACGATAATTTCTGGCTGGGGCTGATTCCTGGCATTCCGGCGGTGCTGGCGTTTTTGTTGAGCGGTCGGCGGGCTACGTTTCCTCGCACCTGGCGTGTACTCTATTTTCTGTTGCTGTTGGCGCAGGTGGTTTTACTTTGCTGGCAACCGTGGCTGTGGCTGAACGGTGAATCCGTTAGCGGTATCGGTCTGGCGCTGGTAGTGGCGGATATTGTGGCGTTAATCTGGCTGCTGACCAATCGACGTTTACGCGCTTGTTTTTATGAAGTAAAAGAATAA", + "dna_sequence_length": 450, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_2413", + "location": [ + [ + "NC_000913", + 2551726, + "-", + 450 + ] + ], + "md5": "a3b1112e6a276ddbe16254c72b225808", + "parent_gene": "", + "protein_md5": "6666f3efa941086340a83ee2e50c9ebf", + "protein_translation": "MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRRLRACFYEVKE", + "protein_translation_length": 149, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK2429" + ], + [ + "gene_synonym", + "GI:90111435" + ], + [ + "gene_synonym", + "ASAP:ABE-0008028" + ], + [ + "gene_synonym", + "GeneID:946917" + ], + [ + "gene_synonym", + "JW2427" + ], + [ + "gene_synonym", + "b2434" + ], + [ + "gene_synonym", + "NP_416929.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76539" + ], + [ + "gene_synonym", + "EcoGene:EG14168" + ], + [ + "gene_synonym", + "ypeA" + ] + ], + "dna_sequence": "ATGGAGATACGCGTATTTCGCCAGGAAGATTTCGAAGAGGTCATCACCCTTTGGGAGCGTTGCGACTTGCTGCGTCCGTGGAACGATCCGGAAATGGACATCGAGCGTAAGATGAACCATGACGTCAGTTTGTTTTTGGTCGCTGAGGTAAACGGTGACGTGGTCGGAACGGTGATGGGCGGTTATGACGGGCATCGCGGGTCTGCTTATTATCTTGGCGTGCATCCAGAGTTTCGTGGGCGTGGGATTGCCAATGCGTTGCTTAATCGGCTGGAGAAAAAGCTGATTGCTCGTGGCTGCCCGAAAATTCAGATCAATGTGCCGGAAGATAACGACATGGTGCTCGGAATGTATGAACGCCTGGGATATGAACACGCCGACGTGCTGAGTCTGGGTAAGCGTTTGATTGAAGATGAAGAGTACTGA", + "dna_sequence_length": 426, + "functions": [ + "GNAT family putative N-acetyltransferase" + ], + "id": "CDS_2414", + 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[ + [ + "NC_000913", + 2552352, + "+", + 870 + ] + ], + "md5": "c0add0cb7c493eca3d5f9f83db5b510c", + "parent_gene": "", + "protein_md5": "b353cedc91ac4357fcffac05436368c3", + "protein_translation": "MSTFKPLKTLTSRRQVLKAGLAALTLSGMSQAIAKDELLKTSNGHSKPKAKKSGGKRVVVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARLTRSGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMAKYLSERENRADEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVVLKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYFHWFDNQKAHSKKR", + "protein_translation_length": 289, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "popB" + ], + [ + "gene_synonym", + "JW2429" + ], + [ + "gene_synonym", + "GI:16130361" + ], + [ + "gene_synonym", + "ASAP:ABE-0008034" + ], + [ + "gene_synonym", + "EcoGene:EG12189" + ], + [ + "gene_synonym", + "hemF" + ], + [ + "gene_synonym", + "ECK2431" + ], + [ + "gene_synonym", + "b2436" + ], + [ + "gene_synonym", + "sec" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36553" + ], + [ + "gene_synonym", + "GeneID:946908" + ], + [ + "gene_synonym", + "NP_416931.1" + ] + ], + "dna_sequence": "ATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGATGGCGCAGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGCGTTTCACTGGTAGTGCATCCGCATAACCCGTATGTTCCCACCAGCCACGCGAATGTGCGGTTTTTTATTGCCGAAAAACCGGGTGCCGATCCCGTCTGGTGGTTTGGCGGTGGCTTCGACTTAACCCCATTCTATGGTTTTGAAGAAGATGCTATTCACTGGCATCGCACCGCCCGTGACCTGTGCCTGCCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCGCGGTATTGGCGGGCTGTTCTTTGATGACCTGAACACGCCAGATTTCGACCGCTGTTTTGCCTTTATGCAGGCGGTAGGCAAAGGCTACACCGACGCTTATTTACCAATTGTCGAGCGACGGAAAGCGATGGCCTACGGCGAGCGCGAGCGCAATTTCCAGTTATATCGTCGCGGTCGTTATGTCGAGTTCAATCTGGTCTGGGATCGCGGCACGCTGTTTGGCCTGCAAACTGGCGGGCGCACCGAGTCTATCCTGATGTCAATGCCGCCACTGGTACGCTGGGAATATGATTATCAGCCAAAAGATGGCAGCCCAGAAGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAA", + "dna_sequence_length": 900, + "functions": [ + "coproporphyrinogen III oxidase" + ], + "id": "CDS_2416", + "location": [ + [ + "NC_000913", + 2553225, + "+", + 900 + ] + ], + "md5": "5e189cbf6b177f367824ab056b9e80a7", + "parent_gene": "", + "protein_md5": "290773f2e578924a6ead21a0f9af21b8", + "protein_translation": "MKPDAHQVKQFLLNLQDTICQQLTAVDGAEFVEDSWQREAGGGGRSRVLRNGGVFEQAGVNFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYVPTSHANVRFFIAEKPGADPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDEYFYLKHRNEQRGIGGLFFDDLNTPDFDRCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDYQPKDGSPEAALSEFIKVRDWV", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_416932.1" + ], + [ + "gene_synonym", + "EcoGene:EG12190" + ], + [ + "gene_synonym", + "ASAP:ABE-0008036" + ], + [ + "gene_synonym", + "yfeG" + ], + [ + "gene_synonym", + "GI:16130362" + ], + [ + "gene_synonym", + "JW2430" + ], + [ + "gene_synonym", + "ECK2432" + ], + [ + "gene_synonym", + "GeneID:946911" + ], + [ + "gene_synonym", + "b2437" + ], + [ + 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structural protein" + ], + "id": "CDS_2442", + "location": [ + [ + "NC_000913", + 2575805, + "-", + 336 + ] + ], + "md5": "cade4d384b5212f31340dbb125bc678c", + "parent_gene": "", + "protein_md5": "c19304397ac23e2aa387684ae488c741", + "protein_translation": "MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIMTLTPGETAMIAGDLALKAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLNYTLCEMTKS", + "protein_translation_length": 111, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:946947" + ], + [ + "gene_synonym", + "maeB" + ], + [ + "gene_synonym", + "ypfF" + ], + [ + "gene_synonym", + "EcoGene:EG14193" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76558" + ], + [ + "gene_synonym", + "ASAP:ABE-0008111" + ], + [ + "gene_synonym", + "ECK2458" + ], + [ + "gene_synonym", + "NP_416958.1" + ], + [ + "gene_synonym", + "JW2447" + ], + [ + "gene_synonym", + "b2463" + ], + [ + "gene_synonym", + "GI:16130388" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0008115" + ], + [ + "gene_synonym", + "GeneID:947006" + ], + [ + "gene_synonym", + "ECK2459" + ], + [ + "gene_synonym", + "JW2448" + ], + [ + "gene_synonym", + "talA" + ], + [ + "gene_synonym", + "b2464" + ], + [ + "gene_synonym", + "GI:16130389" + ] + ], + "dna_sequence": 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"ATGTCCCGAAAAGACCTTGCCAATGCGATTCGCGCACTCAGTATGGATGCGGTACAAAAAGCCAACTCTGGTCATCCCGGCGCGCCGATGGGCATGGCTGATATTGCCGAAGTGCTGTGGAACGATTTTCTTAAACATAACCCTACCGACCCAACCTGGTATGATCGCGACCGCTTTATTCTTTCCAACGGTCACGCGTCGATGCTGCTCTACAGTTTGCTACATCTGACCGGTTACGACCTGCCGCTGGAAGAACTGAAGAACTTCCGTCAGTTGCATTCGAAAACCCCAGGCCACCCGGAGATTGGCTATACGCCAGGCGTTGAAACCACCACCGGCCCGCTTGGACAAGGTTTGGCGAACGCCGTCGGGCTGGCGATAGCAGAGCGTACACTGGCGGCGCAGTTTAACCAGCCAGACCATGAGATCGTCGATCACTTCACCTATGTGTTTATGGGCGACGGCTGCCTGATGGAAGGTATTTCCCACGAAGTCTGTTCGCTGGCAGGCACGCTGGGACTGGGCAAGCTGATTGGTTTTTACGATCACAACGGTATTTCCATCGACGGTGAAACAGAAGGCTGGTTTACCGACGATACGGCAAAACGTTTTGAAGCCTATCACTGGCATGTGATCCATGAAATCGACGGTCACGATCCGCAGGCGGTGAAGGAAGCGATCCTTGAAGCGCAAAGCGTGAAAGATAAGCCGTCGCTGATTATCTGCCGTACGGTGATTGGCTTTGGTTCGCCGAATAAAGCAGGTAAGGAAGAGGCGCACGGCGCACCACTGGGGGAAGAAGAAGTGGCGCTGGCACGGCAAAAACTGGGCTGGCACCATCCGCCATTTGAGATCCCTAAAGAGATTTATCACGCCTGGGATGCCCGTGAAAAAGGCGAAAAAGCGCAGCAGAGCTGGAATGAGAAGTTTGCCGCCTATAAAAAGGCTCATCCGCAACTGGCAGAAGAGTTTACCCGACGGATGAGCGGTGGTTTACCGAAGGACTGGGAGAAAACGACTCAGAAATATATCAATGAGTTACAGGCAAATCCGGCGAAAATCGCTACCCGTAAGGCTTCGCAAAATACGCTTAACGCTTACGGGCCGATGCTGCCTGAGTTGCTCGGCGGTTCGGCGGATCTGGCTCCCAGCAACCTGACCATCTGGAAAGGTTCTGTTTCGCTGAAGGAAGATCCAGCGGGCAACTACATTCACTACGGGGTGCGTGAATTTGGCATGACCGCTATCGCCAACGGCATCGCGCACCACGGCGGCTTTGTGCCGTATACCGCGACGTTCCTGATGTTTGTTGAATACGCCCGTAACGCCGCGCGGATGGCGGCACTGATGAAAGCGCGGCAGATTATGGTTTATACCCACGACTCAATTGGCCTGGGCGAAGATGGTCCGACGCACCAGGCTGTTGAGCAACTGGCCAGCCTGCGCTTAACGCCAAATTTCAGCACCTGGCGACCGTGCGATCAGGTGGAAGCGGCGGTGGGCTGGAAGCTGGCGGTTGAGCGCCACAACGGACCGACGGCACTGATCCTCTCAAGGCAGAATCTGGCCCAGGTGGAACGTACGCCGGATCAGGTTAAAGAGATTGCTCGTGGCGGTTATGTGCTGAAAGACAGCGGCGGTAAGCCAGATATTATTCTGATTGCCACCGGTTCAGAGATGGAAATTACCCTGCAAGCGGCAGAGAAATTAGCAGGAGAAGGTCGCAATGTACGCGTAGTTTCCCTGCCCTCGACCGATATTTTCGACGCCCAGGATGAGGAATATCGGGAGTCGGTGTTGCCTTCTAACGTTGCGGCTCGCGTGGCGGTGGAAGCAGGTATTGCCGATTACTGGTACAAGTATGTTGGTCTGAAAGGGGCAATTGTCGGGATGACGGGTTACGGGGAATCTGCTCCGGCGGATAAGCTGTTCCCGTTCTTTGGCTTTACCGCCGAGAATATTGTGGCAAAAGCGCATAAGGTGCTGGGAGTGAAAGGTGCCTGA", 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"EcoGene:EG14194" + ], + [ + "gene_synonym", + "NP_416961.1" + ], + [ + "gene_synonym", + "b2466" + ], + [ + "gene_synonym", + "JW2450" + ], + [ + "gene_synonym", + "ASAP:ABE-0008120" + ] + ], + "dna_sequence": 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"gene_synonym", + "yffB" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24178" + ], + [ + "gene_synonym", + "EcoGene:EG11147" + ], + [ + "gene_synonym", + "GI:16130396" + ], + [ + "gene_synonym", + "NP_416966.1" + ], + [ + "gene_synonym", + "ECK2466" + ], + [ + "gene_synonym", + "ASAP:ABE-0008140" + ], + [ + "gene_synonym", + "b2471" + ], + [ + "gene_synonym", + "JW2455" + ] + ], + "dna_sequence": "ATGGTTACACTTTACGGTATCAAAAATTGTGACACCATTAAAAAGGCTCGCCGTTGGCTGGAAGCCAATAACATCGACTATCGTTTTCATGATTACCGCGTCGATGGGCTGGACAGCGAATTATTGAACGATTTTATCAACGAATTAGGCTGGGAAGCGTTACTCAACACCCGTGGTACAACCTGGCGTAAACTGGACGAAACCACCCGCAATAAAATCACCGATGCGGCCTCTGCGGCGGCATTAATGACTGAAATGCCTGCAATTATCAAACGTCCATTGCTCTGCGTGCCCGGTAAGCCTATGCTGCTGGGTTTCAGTGATTCCAGTTATCAGCAATTTTTCCATGAGGTGTAG", + "dna_sequence_length": 357, + "functions": [ + "putative ArsC family reductase" + ], + "id": "CDS_2452", + "location": [ + [ + "NC_000913", + 2591247, + "+", + 357 + ] + ], + "md5": "6cd6825c82041842f636de5f55e346dc", + 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[ + "NC_000913", + 2596737, + "-", + 864 + ] + ], + "md5": "6afe8286c32d38e0b472887d6659018d", + "parent_gene": "", + "protein_md5": "79de25710027b9941b278a537a881745", + "protein_translation": "MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVVLVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMGKTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFAQGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHSMQQQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGDPAQCNTFGKSI", + "protein_translation_length": 287, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16130401" + ], + [ + "gene_synonym", + "JW2461" + ], + [ + "gene_synonym", + "GeneID:946957" + ], + [ + "gene_synonym", + "NP_416971.1" + ], + [ + "gene_synonym", + "EcoGene:EG10791" + ], + [ + "gene_synonym", + "purC" + ], + [ + "gene_synonym", + "ECK2472" + ], + [ + "gene_synonym", + "ade" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7D7" + ], + [ + "gene_synonym", + "ASAP:ABE-0008156" + ], + [ + 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"hydrogenase 4, membrane subunit" + ], + "id": "CDS_2465", + "location": [ + [ + "NC_000913", + 2603847, + "+", + 948 + ] + ], + "md5": "9aabde4c1f3b23b373c7aa5dfd920004", + "parent_gene": "", + "protein_md5": "610946c1e49db3658be5403446824b1e", + "protein_translation": "MRQTLCDGYLVIFALAQAVILLMLTPLFTGISRQIRARMHSRRGPGIWQDYRDIHKLFKRQEVAPTSSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGGGDLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIAGSTHIEMISNTLAMGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTEYSGAGLALAKWGLGLKQVVMASLFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFVLASIAENTLARGRFLLIHHVTWLGFSLAALAWVFWLTGL", + "protein_translation_length": 315, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77416" + ], + [ + "gene_synonym", + "GI:16130409" + ], + [ + "gene_synonym", + "JW2469" + ], + [ + "gene_synonym", + "hyfD" + ], + [ + "gene_synonym", + "b2484" + ], + [ + "gene_synonym", + "NP_416979.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0008185" + ], + [ + "gene_synonym", + 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"gene_synonym", + "UniProtKB/Swiss-Prot:P77437" + ] + ], + "dna_sequence": 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"hyfG" + ], + [ + "gene_synonym", + "GeneID:946964" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77329" + ], + [ + "gene_synonym", + "b2487" + ], + [ + "gene_synonym", + "NP_416982.1" + ], + [ + "gene_synonym", + "JW2472" + ], + [ + "gene_synonym", + "EcoGene:EG14215" + ], + [ + "gene_synonym", + "ECK2483" + ], + [ + "gene_synonym", + "ASAP:ABE-0008194" + ] + ], + "dna_sequence": 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"GI:90111447" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71229" + ], + [ + "gene_synonym", + "ASAP:ABE-0008204" + ], + [ + "gene_synonym", + "b2491" + ], + [ + "gene_synonym", + "EcoGene:EG14219" + ], + [ + "gene_synonym", + "ECK2487" + ], + [ + "gene_synonym", + "NP_416986.4" + ], + [ + "gene_synonym", + "hyfR" + ], + [ + "gene_synonym", + "GeneID:948886" + ], + [ + "gene_synonym", + "JW2476" + ] + ], + "dna_sequence": "ATGGCTATGTCAGACGAGGCGATGTTTGCCCCGCCACAAGGAATAACAATTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCAGTAGTGGAATGGCGGAGCTACGCTTTATTCGCACCCACGGCAGTCGTTTTACTTCCCAGGATTGCACACTGTTTAACTGGCTGGCGCGGATAATCACCCCGGTTCTGCAATCATGGCTCAATGATGAAGAACAGCAGGTGGCGCTGCGTTTGCTGGAGAAAGATCGCGATCATCATCGGGTACTGGTTGATATTACTAATGCAGTGCTGTCACATCTTGATCTCGACGATCTGATCGCTGACGTCGCTCGTGAGATCCATCATTTTTTCGGTCTGGCTTCAGTCAGTATGGTACTGGGCGATCATCGAAAGAACGAGAAGTTCAGCCTGTGGTGCAGCGATCTTTCTGCCTCACATTGTGCGTGTCTGCCACGCTGTATGCCTGGCGAAAGTGTATTGCTGACACAAACGCTACAAACCCGACAACCGACCTTGACGCACCGTGCAGATGATCTGTTTCTCTGGCAACGCGACCCGTTATTACTCTTACTTGCATCTAACGGCTGCGAATCTGCGCTCCTTATACCGCTTACCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGTTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGCCAGGCAATGGAAGACCTGCTCCAGCAGGTAGATATTGTGGCGAAGAGCGACAGTACGGTGTTGATTTGTGGTGAAACCGGAACTGGCAAAGAGGTGATCGCCAGAGCGATCCATCAACTTAGCCCGCGACGCGACAAGCCGCTGGTCAAAATCAACTGCGCTGCCATCCCCGCCAGTCTTCTGGAAAGTGAGTTATTCGGTCATGACAAAGGGGCGTTTACTGGTGCGATTAATACCCATCGTGGTCGTTTTGAAATTGCCGATGGCGGCACGTTGTTTCTCGATGAAATTGGCGATCTGCCGTTAGAACTTCAGCCTAAACTGCTGCGCGTATTGCAGGAGCGGGAGATTGAGCGTCTCGGCGGGAGTAGAACGATCCCGGTGAATGTCAGAGTCATTGCCGCCACCAACCGTGATTTGTGGCAAATGGTTGAAGATCGCCAGTTTCGCAGCGATCTCTTTTATCGCCTGAATGTCTTCCCACTGGAATTGCCGCCGCTACGCGACCGTCCGGAAGATATCCCTCTTTTAGCAAAACATTTCACGCAAAAAATGGCGCGCCATATGAATCGCGCAATTGACGCCATCCCGACCGAGGCACTACGCCAGTTGATGTCGTGGGATTGGCCGGGCAACGTGCGCGAGCTGGAAAACGTGATTGAGCGGGCGGTACTGTTGACTCGTGGTAACAGTCTGAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTTACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGCCGGGCCCCGTGGCGCAGCGACGCGATTAGGGATGAAGCGCACCACGCTGCTGTCACGAATGCAGCGGCTGGGGATCTCGGTTCGCGAGGTGTTGTAA", 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"JW2480" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76569" + ], + [ + "gene_synonym", + "GeneID:946974" + ], + [ + "gene_synonym", + "ECK2491" + ], + [ + "gene_synonym", + "b2495" + ], + [ + "gene_synonym", + "ASAP:ABE-0008214" + ], + [ + "gene_synonym", + "EcoGene:EG14200" + ], + [ + "gene_synonym", + "GI:16130420" + ], + [ + "gene_synonym", + "NP_416990.1" + ] + ], + "dna_sequence": "ATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACACCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGGCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAA", + "dna_sequence_length": 360, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_2477", + "location": [ + [ + "NC_000913", + 2617578, + "+", + 360 + ] + ], + "md5": "3da554c3ccee2ef5d78d6c64f5f14ee7", + "parent_gene": "", + 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phosphoribosyltransferase" + ], + "id": "CDS_2480", + "location": [ + [ + "NC_000913", + 2620872, + "-", + 627 + ] + ], + "md5": "533a30bf663d2c00cccc42586d833956", + "parent_gene": "", + "protein_md5": "03976b836c485a5ee89901e09d2fb723", + "protein_translation": "MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEATADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMYRNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLVAAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK", + "protein_translation_length": 208, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG10798" + ], + [ + "gene_synonym", + "ASAP:ABE-0008230" + ], + [ + "gene_synonym", + "JW2484" + ], + [ + "gene_synonym", + "GeneID:946975" + ], + [ + "gene_synonym", + "NP_416994.1" + ], + [ + "gene_synonym", + "purG" + ], + [ + "gene_synonym", + "GI:16130424" + ], + [ + "gene_synonym", + "ECK2495" + ], + [ + "gene_synonym", + "purI" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08178" + ], + [ + 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"gene_synonym", + "UniProtKB/Swiss-Prot:P0AFL6" + ], + [ + "gene_synonym", + "b2502" + ], + [ + "gene_synonym", + "ECK2498" + ], + [ + "gene_synonym", + "ppx" + ], + [ + "gene_synonym", + "GI:16130427" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK2500" + ], + [ + "gene_synonym", + "b2504" + ], + [ + "gene_synonym", + "GI:16130429" + ], + [ + "gene_synonym", + "EcoGene:EG14203" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64545" + ], + [ + "gene_synonym", + "ASAP:ABE-0008247" + ] + ], + "dna_sequence": "GTGAGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCCGTTTTATCTACTCGTCCGTCGGTGCCTGGCAGCACCATCAGAGCAAAAAAGAAGCTCAGCAATCCACACTCTCCGTCGAATCACCGGTACAACGTTAG", + "dna_sequence_length": 192, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2486", + "location": [ + [ + "NC_000913", + 2629290, + "+", + 192 + ] + ], + "md5": "ba8316daa1e8bd99bd0ad5e11436e92d", + "parent_gene": "", + "protein_md5": "02fa36f50e6ee42957a7e95144390f9a", + "protein_translation": "MSQATSMRKRHRFNSRMTRIVLLISFIFFFGRFIYSSVGAWQHHQSKKEAQQSTLSVESPVQR", + "protein_translation_length": 63, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P65290" + ], + 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factor" + ], + "id": "CDS_2495", + "location": [ + [ + "NC_000913", + 2639283, + "-", + 621 + ] + ], + "md5": "e29d57bd63282fb6d0b8b6470e502e59", + "parent_gene": "", + "protein_md5": "7be0ae53022bd373b7732ea7c0a31e64", + "protein_translation": "MEIYENENDQVEAVKRFFAENGKALAVGVILGVGALIGWRYWNSHQVDSARSASLAYQNAVTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTSDENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIVADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKINNLSI", + "protein_translation_length": 206, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG10453" + ], + [ + "gene_synonym", + "JW2498" + ], + [ + "gene_synonym", + "ECK2510" + ], + [ + "gene_synonym", + "GI:16130439" + ], + [ + "gene_synonym", + "GeneID:946989" + ], + [ + "gene_synonym", + "b2514" + ], + [ + "gene_synonym", + "NP_417009.1" + ], + [ + "gene_synonym", + "hisS" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60906" + ], + [ + "gene_synonym", + "ASAP:ABE-0008278" + ] + ], + "dna_sequence": 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"iscR" + ], + [ + "gene_synonym", + "GI:16130456" + ], + [ + "gene_synonym", + "b2531" + ], + [ + "gene_synonym", + "GeneID:945279" + ], + [ + "gene_synonym", + "EcoGene:EG13397" + ], + [ + "gene_synonym", + "NP_417026.1" + ], + [ + "gene_synonym", + "yfhP" + ], + [ + "gene_synonym", + "ASAP:ABE-0008326" + ] + ], + "dna_sequence": "ATGAGACTGACATCTAAAGGGCGCTATGCCGTGACCGCAATGCTTGACGTTGCGCTCAACTCTGAAGCGGGCCCGGTACCGTTGGCTGATATTTCCGAACGTCAGGGAATTTCCCTTTCTTATCTGGAACAACTGTTTTCCCGTCTGCGTAAAAATGGTCTGGTTTCCAGCGTACGTGGACCAGGCGGTGGTTATCTGTTAGGCAAAGATGCCAGCAGCATCGCCGTTGGCGAAGTAATTAGCGCCGTTGACGAATCTGTAGATGCCACCCGTTGTCAGGGTAAAGGCGGCTGCCAGGGCGGCGATAAATGCCTGACCCACGCGCTGTGGCGTGATTTGAGCGACCGTCTCACCGGTTTTCTCAACAACATTACTTTAGGCGAACTGGTTAATAACCAGGAAGTGCTGGATGTGTCTGGTCGTCAGCATACTCACGACGCGCCACGCACCCGCACACAAGACGCGATCGACGTTAAGTTACGCGCTTAA", + "dna_sequence_length": 489, + "functions": [ + "isc operon transcriptional repressor", + "suf operon transcriptional activator", + "oxidative stress- and iron 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"ATGTCTGCTTCGTCATTACCATTGCCGCAGGGCAAGAGCGTCTCGCTCAAACAATTTGTCAGTCGCCATATTAATGAGATCGGTTTGCTGGTGGTGATTGCCATTCTTTATCTGGTCTTCTCCCTGAACGCGCCTGGCTTTATCTCATTGAATAACCAGATGAACGTGCTGCGCGATGCCGCCACCATTGGGATTGCCGCCTGGGCGATGACGCTGATTATTATCTCCGGTGAAATTGATGTCAGCGTTGGGCCGATGGTGGCTTTTGTCTCGGTGTGCCTGGCATTTTTGCTGCAATTTGAAGTTCCGCTGGCGGTGGCGTGCCTGCTGGTGTTGCTGTTAGGCGCGCTGATGGGAACGCTGGCCGGGGTGCTGCGCGGCGTGTTTAATGTACCAAGTTTCGTTGCCACACTGGGGCTGTGGAGCGCCCTGCGCGGAATGGGGCTGTTTATGACGAACGCACTGCCAGTGCCGATTGATGAAAACGAGGTGCTGGACTGGCTGGGCGGACAATTTCTCGGTGTGCCGGTATCCGCGCTGATCATGATTGTGTTGTTTGCGCTGTTTGTGTTCATCAGCCGCAAAACCGCCTTCGGGCGCTCGGTTTTTGCCGTTGGCGGTAATGCTACGGCGGCGCAGTTGTGCGGCATCAACGTTCGTCGGGTGCGCATTCTTATCTTTACCCTTTCGGGATTATTAGCGGCGGTGACCGGCATTTTGTTGGCGGCGCGCCTCGGTTCTGGTAACGCAGGTGCCGCAAACGGTCTGGAGTTTGACGTCATCGCCGCGGTCGTGGTCGGCGGTACGGCACTTTCCGGCGGTCGCGGTTCCCTGTTCGGTACATTGCTTGGTGTGCTGGTGATTACGCTAATCGGTAACGGTCTGGTGCTGCTCGGTATTAACTCCTTTTTCCAGCAGGTGGTACGCGGCGTCATCATCGTGGTGGCGGTGCTGGCGAATATCTTGCTGACCCAGCGAAGCAGTAAAGCGAAACGCTAA", + "dna_sequence_length": 999, + "functions": [ + "putative sugar ABC transporter permease" + ], + "id": "CDS_2529", + "location": [ + [ + "NC_000913", + 2676825, + "-", + 999 + ] + ], + "md5": "9a03144075b60cad635fc3de321c9c88", + "parent_gene": "", + "protein_md5": "60641f629888667b5b1346e1f87fde86", + "protein_translation": "MSASSLPLPQGKSVSLKQFVSRHINEIGLLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFEVPLAVACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALRGMGLFMTNALPVPIDENEVLDWLGGQFLGVPVSALIMIVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQVVRGVIIVVAVLANILLTQRSSKAKR", + "protein_translation_length": 332, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:948990" + ], + [ + "gene_synonym", + "ASAP:ABE-0008376" + ], + [ + "gene_synonym", + "yphE" + ], + [ + "gene_synonym", + "GI:16130472" + ], + [ + "gene_synonym", + "EcoGene:EG13466" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77509" + ], + [ + "gene_synonym", + "ECK2544" + ], + [ + "gene_synonym", + "NP_417042.1" + ], + [ + "gene_synonym", + "JW2531" + ], + [ + "gene_synonym", + "b2547" + ] + ], + "dna_sequence": "ATGTTCACGGCAACAGAGGCAGTCCCGGTAGCAAAAGTGGTGGCAGGAAATAAGCGTTATCCCGGCGTCGTTGCGCTGGATAACGTTAACTTCACGCTCAATAAAGGCGAAGTTCGTGCGCTGTTAGGTAAAAACGGCGCGGGCAAATCGACTCTCATTCGAATGCTTACCGGCAGCGAACGCCCGGATAGCGGTGATATCTGGATTGGCGAGACGCGACTGGAAGGTGACGAAGCTACGCTGACTCGCCGTGCCGCTGAACTGGGGGTGCGCGCGGTTTATCAGGAGTTAAGTCTGGTGGAAGGGCTGACAGTGGCGGAAAACCTCTGCCTCGGTCAGTGGCCCCGCCGCAACGGCATGATTGATTACCTGCAAATGGCGCAGGATGCCCAACGTTGCTTACAGGCGCTGGGCGTTGACGTTAGTCCTGAACAACTTGTTTCAACGCTAAGCCCGGCGCAAAAGCAGCTGGTGGAAATTGCGCGGGTGATGAAGGGCGAGCCGCGCGTGGTCATTCTTGATGAACCTACCAGTTCGCTTGCGAGTGCGGAAGTTGAACTGGTGATCAGCGCGGTGAAAAAGATGTCGGCACTGGGCGTGGCGGTGATTTATGTCAGCCACCGGATGGAAGAAATTCGCCGCATTGCCTCCTGTGCCACCGTTATGCGCGATGGTCAGGTGGCGGGCGATGTGATGCTCGAAAACACCTCCACGCATCATATTGTGTCGCTGATGCTCGGGCGCGATCACGTTGATATTGCGCCGGTAGCCCCTCAGGAAATTGTGGATCAGGCCGTGCTGGAAGTCCGTGCGTTACGCCATAAGCCCAAGCTGGAGGATATCAGTTTTACGCTACGTCGTGGCGAAGTGCTCGGCATTGCTGGTCTGCTGGGGGCAGGGCGCAGTGAATTGCTGAAGGCGATTGTTGGGCTGGAGGAGTATGAACAGGGCGAAATTGTTATCAACGGCGAGAAAATCACGCGCCCCGATTACGGCGACATGCTGAAACGCGGCATTGGCTATACGCCAGAAAACCGCAAAGAAGCGGGGATCATTCCCTGGTTGGGCGTTGACGAAAATACAGTGCTGACCAATCGGCAAAAAATCAGCGCCAACGGTGTGCTGCAATGGTCCACCATCCGCCGCCTGACCGAAGAGGTGATGCAGCGGATGACGGTCAAGGCCGCCAGTAGCGAAACACCCATCGGCACGCTTTCTGGTGGCAATCAGCAAAAAGTGGTGATCGGTCGTTGGGTCTATGCTGCCAGCCAGATTTTGTTGCTCGACGAGCCAACGCGCGGCGTCGATATCGAAGCCAAACAGCAGATTTACCGTATTGTCCGTGAGCTGGCTGCCGAAGGAAAAAGCGTGGTGTTTATCTCCAGTGAAGTGGAGGAGTTGCCGCTGGTGTGTGACCGCATCCTGTTATTACAGCACGGCACGTTCTCGCAGGAGTTTCACGCTCCGGTCAATGTGGATGAGCTGATGTCCGCCATTCTGTCTGTGCACTGA", + "dna_sequence_length": 1512, + "functions": [ + "putative sugar ABC transporter ATPase" + ], + "id": "CDS_2530", + "location": [ + [ + "NC_000913", + 2678361, + "-", + 1512 + ] + ], + "md5": "de039a03f219b7d964de07c201f5719c", + "parent_gene": "", + "protein_md5": "f70b35a91014429c50b39103afb4ac29", + "protein_translation": "MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGKNGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEGLTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEIARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASCATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKPKLEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLEEYEQGEIVINGEKITRPDYGDMLKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKISANGVLQWSTIRRLTEEVMQRMTVKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVRELAAEGKSVVFISSEVEELPLVCDRILLLQHGTFSQEFHAPVNVDELMSAILSVH", + "protein_translation_length": 503, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77269" + ], + [ + "gene_synonym", + "ASAP:ABE-0008378" + ], + [ + "gene_synonym", + "GeneID:947020" + ], + [ + "gene_synonym", + "yphF" + ], + [ + "gene_synonym", + "b2548" + ], + [ + "gene_synonym", + "GI:16130473" + ], + [ + "gene_synonym", + "EcoGene:EG13467" + ], + [ + "gene_synonym", + "ECK2545" + ], + [ + "gene_synonym", + "NP_417043.1" + ], + [ + "gene_synonym", + "JW2532" + ] + ], + "dna_sequence": "ATGCCTACAAAAATGAGAACAACCCGTAATCTATTATTAATGGCTACGCTATTAGGTAGCGCACTATTTGCCAGGGCTGCGGAAAAAGAAATGACCATTGGCGCAATATACCTTGATACTCAGGGATACTACGCTGGAGTGCGTCAGGGCGTTCAGGATGCGGCAAAAGATTCCTCAGTACAAGTTCAGTTAATAGAAACTAACGCCCAGGGTGATATTTCGAAAGAAAGTACCTTTGTTGATACCCTCGTGGCGCGTAATGTCGATGCCATTATTTTATCGGCAGTGTCTGAAAATGGCAGTAGCCGTACCGTTCGTCGCGCCAGTGAAGCGGGCATTCCGGTGATTTGCTACAACACCTGTATTAATCAAAAGGGGGTCGATAAATATGTCTCGGCGTATCTGGTCGGCGATCCGCTGGAATTTGGTAAAAAACTGGGTAACGCTGCCGCTGATTATTTTATTGCCAATAAAATTGACCAGCCGAAAATTGCCGTCATCAATTGCGAAGCCTTTGAAGTTTGTGTGCAGCGACGTAAAGGATTTGAAGAAGTTTTAAAATCCCGCGTTCCCGGCGCGCAAATTGTCGCTAATCAGGAAGGGACTGTTTTAGATAAAGCGATTTCCGTTGGTGAAAAACTAATTATCTCCACGCCGGATCTCAACGCCATTATGGGGGAATCGGGCGGTGCGACACTCGGCGCGGTAAAAGCGGTACGTAATCAAAATCAGGCCGGAAAAATTGCTGTTTTCGGTTCGGATATGACAACCGAAATTGCTCAGGAGCTGGAAAACAATCAGGTGCTGAAAGCGGTAGTGGATATTTCCGGTAAGAAAATGGGCAATGCTGTTTTCGCGCAAACATTGAAGGTTATCAATAAACAAGCCGACGGTGAAAAAGTGATTCAGGTGCCTATCGATCTCTATACCAAAACGGAAGACGGTAAACAGTGGCTGGCAACGCACGTTGATGGTCTGCCCTAA", + "dna_sequence_length": 984, + "functions": [ + "putative sugar ABC transporter periplasmic binding protein" + ], + "id": "CDS_2531", + "location": [ + [ + "NC_000913", + 2679367, + "-", + 984 + ] + ], + "md5": "50be0e2b4f4f793b68b0bc529e9f807d", + "parent_gene": "", + "protein_md5": "d2d4694791945a7992117e83cca3474d", + "protein_translation": "MPTKMRTTRNLLLMATLLGSALFARAAEKEMTIGAIYLDTQGYYAGVRQGVQDAAKDSSVQVQLIETNAQGDISKESTFVDTLVARNVDAIILSAVSENGSSRTVRRASEAGIPVICYNTCINQKGVDKYVSAYLVGDPLEFGKKLGNAAADYFIANKIDQPKIAVINCEAFEVCVQRRKGFEEVLKSRVPGAQIVANQEGTVLDKAISVGEKLIISTPDLNAIMGESGGATLGAVKAVRNQNQAGKIAVFGSDMTTEIAQELENNQVLKAVVDISGKKMGNAVFAQTLKVINKQADGEKVIQVPIDLYTKTEDGKQWLATHVDGLP", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:162135907" + ], + [ + "gene_synonym", + "GeneID:947021" + ], + [ + "gene_synonym", + "NP_417044.4" + ], + [ + "gene_synonym", + "yphG" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76585" + ], + [ + "gene_synonym", + "JW5405" + ], + [ + "gene_synonym", + "b2549" + ], + [ + "gene_synonym", + "ECK2546" + ], + [ + "gene_synonym", + "EcoGene:EG13468" + ], + [ + "gene_synonym", + "ASAP:ABE-0008380" + ] + ], + "dna_sequence": "ATGACTCCAGTAAAAGTGTGGCAAGAGCGCGTTGAGATCCCGACCTATGAAACCGGGCCGCAGGATATACATCCCATGTTCCTGGAAAATCGCGTTTATCAGGGATCGTCCGGCGCGGTTTATCCCTACGGCGTGACCGATACGCTGAGCGAGCAGAAAACCCTGAAATCCTGGCAGGCGGTGTGGCTGGAAAACGACTACATCAAAGTGATGATCCTGCCGGAACTGGGCGGTCGGGTGCATCGCGCGTGGGATAAAGTGAAACAGCGCGATTTTGTTTATCACAATGAAGTCATTAAACCTGCGCTGGTGGGGCTGCTGGGGCCGTGGATTTCCGGTGGGATTGAGTTTAACTGGCCGCAACATCATCGCCCGACCACCTTTATGCCCGTTGATTTCACCCTCGAAGCCCATGAAGACGGTGCACAGACGGTGTGGGTAGGCGAAACGGAGCCGATGCATGGTTTACAGGTGATGACAGGTTTCACCCTGCGCCCTGACCGGGCGGCGCTGGAAATCGCCAGCCGCGTCTATAACGGGAACGCCACGCCGCGTCATTTCTTGTGGTGGGCCAACCCGGCAGTGAAAGGGGGGGAAGGGCATCAGAGCGTCTTCCCGCCGGATGTAACGGCGGTGTTTGATCACGGCAAACGGGCCGTCTCCGCTTTCCCCATCGCTACCGGCACTTACTACAAAGTGGACTACTCCGCTGGAGTGGACATTTCTCGCTATAAAAATGTGCCTGTTCCAACCTCATATATGGCCGAAAAATCGCAGTACGATTTTGTCGGCGCGTGGTGTCACGATGAAGATGGCGGTTTGCTGCACGTTGCCAACCACCATATTGCGCCAGGTAAAAAACAGTGGAGTTGGGGACACAGTGAATTTGGCCAGGCGTGGGATAAGAGTCTGACCGACAATAACGGCCCGTATATCGAACTGATGACCGGTATTTTTGCCGATAACCAGCCCGATTTTACCTGGCTTGATGCTTACGAAGAGAAGCGTTTTGAGCAGTATTTCCTGCCTTATCATTCTTTGGGCATGGTGCAAAATGCCTCCCGCGATGCGGTGATAAAACTCCAGCGTAGTAAGCGGGGGATTGAGTGGGGGCTGTATGCCATCTCTCCGTTGAACGGATACCGCCTGGCGATCCGCGAAATCGGTAAATGCAACGCGTTACTTGATGATGCCGTGGCACTGATGCCTGCGACCGCCATCCAGGGCGTGTTGCACGGTATCAATCCTGAAAGGCTGACCATTGAGCTCTCCGATGCCGACGGCAATATTGTACTGAGTTATCAGGAACATCAGCCGCAAGCGTTGCCGTTACCGGACGTCGCCAAAGCGCCACTGGCAGCACAAGACATTACCAGTACAGATGAAGCCTGGTTTATCGGTCAGCATCTGGAGCAATATCATCACGCCAGCCGTTCACCGTTCGATTACTACCTGCGCGGCGTGGCGCTGGACCCGCTGGATTATCGCTGTAACCTGGCGCTGGCGATGCTGGAATATAACCGCGCAGATTTCCCGCAAGCGGTGGCGTATGCCACTCAGGCTCTGAAACGCGCACATGCGCTGAACAAAAATCCGCAGTGCGGACAGGCGAGTTTGATTCGCGCCAGTGCTTACGAACGTCAGGGACAATATCAACAAGCCGAAGAGGATTTCTGGCGTGCGGTCTGGAGCGGCAACAGCAAAGCCGGTGGCTATTATGGCCTGGCACGACTGGCGGCGCGTAATGGTAACTTCGACGCTGGTCTGGATTTTTGCCAACAAAGTCTTCGCGCCTGCCCAACCAATCAGGAAGTGCTTTGCCTGCATAATCTGCTGCTGGTGTTAAGTGGTCGTCAGGACAACGCGCGTGTGCAGCGCGAGAAACTGCTGCGCGATTATCCGCTGAACGCCACTCTGTGGTGGCTGAACTGGTTCGATGGTCGTAGCGAATCAGCTCTCGCGCAGTGGCGCGGTCTGTGTCAGGGACGCGACGTTAACGCCCTGATGACCGCCGGGCAACTGATTAACTGGGGAATGCCCACCCTGGCGGCAGAGATGCTGAACGCACTGGACTGCCAGCGCACGCTGCCGCTTTACCTGCAAGCCAGCTTGCTGCCGAAAGCCGAACGTGGCGAACTGGTCGCAAAAGCCATTGATGTCTTCCCGCAGTTTGTCCGTTTCCCGAATACGCTGGAAGAAGTGGCGGCGCTGGAGAGTATTGAAGAGTGCTGGTTTGCTCGCCATTTACTAGCTTGCTTCTACTACAACAAACGTAGCTACAACAAAGCCATTGCCTTTTGGCAACGTTGCGTAGAGATGTCGCCGGAGTTTGCCGACGGCTGGCGCGGGTTAGCGATCCATGCGTGGAATAAGCAACACGATTATGAGCTGGCCGCGCGTTATCTTGATAATGCTTATCAGCTTGCGCCGCAGGATGCACGTCTGCTTTTCGAACGGGATTTGCTGGATAAGTTAAGTGGAGCCACACCGGAGAAACGACTGGCGCGTCTGGAAAATAATCTGGAAATTGCGCTGAAACGCGACGACATGACCGCAGAACTGCTCAATTTGTGGCATCTCACGGGTCAGGCAGACAAAGCGGCGGACATTCTCGCCACGCGCAAATTCCACCCGTGGGAAGGCGGGGAAGGGAAGGTCACCAGTCAGTTTATCCTCAACCAGTTATTACGCGCCTGGCAGCATCTTGATGCCAGACAGCCGCAGCAGGCCTGCGAACTGCTTCATGCCGCGCTGCATTATCCGGAGAATTTAAGCGAAGGCCGTTTACCGGGGCAAACTGATAACGACATCTGGTTCTGGCAGGCGATATGCGCCAACGCGCAGGGCGATGAAACTGAAGCGACGCGTTGTTTACGTCTGGCGGCGACCGGCGATCGCACTATTAACATTCACAGTTATTACAACGATCAGCCGGTTGATTATCTCTTCTGGCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAACAGTGGGCGCAAGAGATGGCGAAAACCAGTATCGAAGCGGATTTCTTTGCCGTCTCGCAACCTGACTTGTTGTCGCTGTATGGCGATTTACAACAGCAGCATAAAGAAAAATGCCTGATGGTGGCGATGCTGGCGTCCGCGGGACTCGGGGAGGTTGCGCAATATGAGTCTGCTCGCGCTGAATTGACGGCGATTAATCCGGCTTGGCCGAAAGCGGCATTATTCACCACCGTGATGCCTTTTATTTTTAACCGCGTTCACTAA", 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"MTPVKVWQERVEIPTYETGPQDIHPMFLENRVYQGSSGAVYPYGVTDTLSEQKTLKSWQAVWLENDYIKVMILPELGGRVHRAWDKVKQRDFVYHNEVIKPALVGLLGPWISGGIEFNWPQHHRPTTFMPVDFTLEAHEDGAQTVWVGETEPMHGLQVMTGFTLRPDRAALEIASRVYNGNATPRHFLWWANPAVKGGEGHQSVFPPDVTAVFDHGKRAVSAFPIATGTYYKVDYSAGVDISRYKNVPVPTSYMAEKSQYDFVGAWCHDEDGGLLHVANHHIAPGKKQWSWGHSEFGQAWDKSLTDNNGPYIELMTGIFADNQPDFTWLDAYEEKRFEQYFLPYHSLGMVQNASRDAVIKLQRSKRGIEWGLYAISPLNGYRLAIREIGKCNALLDDAVALMPATAIQGVLHGINPERLTIELSDADGNIVLSYQEHQPQALPLPDVAKAPLAAQDITSTDEAWFIGQHLEQYHHASRSPFDYYLRGVALDPLDYRCNLALAMLEYNRADFPQAVAYATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLARLAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRDYPLNATLWWLNWFDGRSESALAQWRGLCQGRDVNALMTAGQLINWGMPTLAAEMLNALDCQRTLPLYLQASLLPKAERGELVAKAIDVFPQFVRFPNTLEEVAALESIEECWFARHLLACFYYNKRSYNKAIAFWQRCVEMSPEFADGWRGLAIHAWNKQHDYELAARYLDNAYQLAPQDARLLFERDLLDKLSGATPEKRLARLENNLEIALKRDDMTAELLNLWHLTGQADKAADILATRKFHPWEGGEGKVTSQFILNQLLRAWQHLDARQPQQACELLHAALHYPENLSEGRLPGQTDNDIWFWQAICANAQGDETEATRCLRLAATGDRTINIHSYYNDQPVDYLFWQGMALRLLGEQQTAQQLFSEMKQWAQEMAKTSIEADFFAVSQPDLLSLYGDLQQQHKEKCLMVAMLASAGLGEVAQYESARAELTAINPAWPKAALFTTVMPFIFNRVH", 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"ATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGCAGTCAGTAATATTTTGCAGGAACTGGAAAGCGAAAAACGGGTGGTGAATATTGACGATGAAAGCCAGACGCGCGGGCATAGTAGCGGTACATGGCTGATTGCGCCGGAAGGTGACTGGACGCTGTGCCTGAACGTGACGCCCACCAGTATTGAGTGTCAGGTTGCTAATGCTTGTTTAAGTCCGAAAGGTGAATTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAGTGGAGAACCGTGGATCACCAGCTGGGTTGATCGCTCTGCCAATGCCATTGGTTTGAGTCTGTATAACTTCCTCAACATCCTCAATATTAATCAGATTTGGTTGTACGGTCGCAGTTGTGCCTTTGGTGAGAACTGGCTTAATACTATTATTCGCCAGACAGGATTTAACCCGTTCGACCGCGACGAAGGACCGAGCGTGAAAGCGACGCAAATTGGCTTTGGGCAATTAAGCCGCGCACAACAGGTGCTGGGAATTGGCTATTTGTATGTTGAGGCGCAGTTACGACAGATTTGA", 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"gene_synonym", + "EcoGene:EG11372" + ], + [ + "gene_synonym", + "yfhC" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68398" + ], + [ + "gene_synonym", + "JW2543" + ], + [ + "gene_synonym", + "ASAP:ABE-0008419" + ], + [ + "gene_synonym", + "b2559" + ], + [ + "gene_synonym", + "ECK2557" + ], + [ + "gene_synonym", + "GI:145698301" + ], + [ + "gene_synonym", + "tadA" + ], + [ + "gene_synonym", + "NP_417054.2" + ] + ], + "dna_sequence": "TTGTCTGAAGTCGAATTTAGCCACGAATACTGGATGCGTCACGCGCTGACGCTGGCGAAACGTGCCTGGGATGAGCGGGAAGTGCCGGTCGGCGCGGTATTAGTGCATAACAATCGGGTAATCGGCGAAGGCTGGAACCGCCCGATTGGTCGCCATGATCCCACCGCACATGCAGAAATCATGGCCCTGCGGCAGGGTGGTCTGGTGATGCAAAATTATCGTCTGATCGACGCCACGTTGTATGTCACGCTTGAACCATGTGTAATGTGTGCCGGAGCGATGATCCACAGTCGCATTGGTCGCGTGGTCTTTGGTGCGCGTGACGCGAAAACTGGCGCTGCGGGATCTTTAATGGATGTGCTGCATCATCCGGGTATGAATCACCGAGTGGAAATTACGGAAGGAATACTGGCGGATGAGTGCGCGGCGTTGCTCAGTGACTTCTTTCGCATGCGCCGCCAGGAAATTAAAGCGCAGAAAAAAGCGCAATCCTCGACGGATTAA", + "dna_sequence_length": 504, + "functions": [ + "tRNA-specific adenosine deaminase" + ], + "id": "CDS_2542", + "location": [ + [ + "NC_000913", + 2697857, + "-", + 504 + ] + ], + "md5": "782338ca990e23df6c3445fb37a39989", + "parent_gene": "", + "protein_md5": "bfbf4b8e66e6d230b32679dffad7d9f0", + "protein_translation": "MSEVEFSHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFFRMRRQEIKAQKKAQSSTD", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW5408" + ], + [ + "gene_synonym", + "EcoGene:EG11371" + ], + [ + "gene_synonym", + "GeneID:947026" + ], + [ + "gene_synonym", + "yfhB" + ], + [ + "gene_synonym", + "GI:90111459" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD42" + ], + [ + "gene_synonym", + "ECK2558" + ], + [ + "gene_synonym", + "b2560" + ], + [ + "gene_synonym", + "pgpC" + ], + [ + "gene_synonym", + "NP_417055.4" + ], + [ + "gene_synonym", + "ASAP:ABE-0008421" + ] + ], + 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"UniProtKB/Swiss-Prot:P60785" + ], + [ + "gene_synonym", + "ECK2567" + ], + [ + "gene_synonym", + "b2569" + ], + [ + "gene_synonym", + "lepA" + ], + [ + "gene_synonym", + "GI:16130494" + ] + ], + "dna_sequence": 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"JW2559" + ], + [ + "gene_synonym", + "NP_417070.2" + ], + [ + "gene_synonym", + "trmN6" + ], + [ + "gene_synonym", + "ASAP:ABE-0008473" + ], + [ + "gene_synonym", + "yfiC" + ], + [ + "gene_synonym", + "GeneID:947047" + ], + [ + "gene_synonym", + "b2575" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31825" + ], + [ + "gene_synonym", + "GI:90111461" + ], + [ + "gene_synonym", + "ECK2573" + ], + [ + "gene_synonym", + "EcoGene:EG11538" + ], + [ + "gene_synonym", + "trmN" + ] + ], + "dna_sequence": 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"MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQRKMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAPAALALDALWSRNGKLATLSEETCQKLRDALPEHVAISNPLDLRDDASSEHYIKTLDILLHSQDFDALMVIHSPSAAAPATESAQVLIEAVKHHPRSKYVSLLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARVHGLLVQSMANRAGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGSEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVELKNGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTRAISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNLAQREES", + "protein_translation_length": 886, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW2569" 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"ATGTTGTCAAAATTTAAGCGTAATAAACATCAACAACACCTTGCCCAACTACCCAAGATTTCTCAATCAGTTGATGATGTCGATTTCTTTTACGCTCCCGCCGACTTCCGGGAGACGCTGCTGGAAAAAATAGCCAGCGCGAAGCAGCGCATTTGCATTGTCGCCCTGTATCTCGAACAGGATGACGGTGGCAAAGGCATTCTGAACGCGTTGTATGAGGCTAAAAGGCAGCGTCCGGAACTGGATGTGCGGGTGCTGGTCGACTGGCATCGTGCACAACGTGGACGCATTGGCGCTGCGGCATCTAACACTAACGCTGACTGGTACTGCCGCATGGCGCAGGAAAATCCGGGCGTAGATGTTCCGGTTTATGGCGTTCCAATCAATACTCGTGAAGCCCTTGGTGTTCTGCACTTTAAAGGCTTTATCATCGACGATAGCGTACTTTATAGCGGTGCCAGCCTGAACGATGTTTACCTGCATCAGCACGATAAATATCGCTACGACCGTTATCATCTGATCCGTAACCGTAAGATGTCAGACATTATGTTTGAATGGGTTACACAGAATATTATGAATGGCCGCGGCGTTAATCGTCTGGATGATGTTAATCGGCCAAAAAGCCCGGAAATCAAGAACGATATTCGTCTGTTCCGCCAGGAGCTGCGTGATGCCGCTTATCATTTCCAGGGCGATGCCGACAACGATCAGCTTTCTGTAACGCCGCTAGTGGGGCTGGGGAAATCGAGTCTGTTGAACAAGACCATTTTCCATCTTATGCCTTGTGCCGAGCAGAAACTAACCATCTGTACGCCATACTTCAACCTGCCAGCAATCCTTGTGCGCAATATTATCCAGTTGCTGCGCGAAGGGAAAAAGGTCGAAATTATTGTTGGTGATAAAACCGCGAATGACTTCTACATTCCGGAAGATGAACCTTTCAAGATAATTGGCGCATTGCCTTATCTCTATGAGATCAATCTGCGTCGTTTCCTGAGCCGTTTGCAGTATTACGTCAATACTGACCAGCTAGTGGTTCGGTTATGGAAAGATGACGACAACACCTATCACCTGAAAGGGATGTGGGTTGATGATAAGTGGATGTTGATCACCGGTAATAACCTGAACCCGCGCGCCTGGCGTCTGGATCTGGAAAACGCCATTTTGATCCACGATCCGCAACTTGAGCTGGCGCCACAGCGAGAGAAAGAACTGGAGCTGATCCGCGAGCATACCACCATCGTTAAGCACTATCGCGATCTGCAAAGTATTGCCGATTATCCGGTGAAGGTTCGTAAACTCATCCGCCGTTTGCGCCGTATCCGCATCGACCGATTAATTAGCCGCATCCTGTAA", 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"protein_translation": "MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVWQLTRH", + "protein_translation_length": 107, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW2571" + ], + [ + "gene_synonym", + "ASAP:ABE-0008515" + ], + [ + "gene_synonym", + "kgtP" + ], + [ + "gene_synonym", + "EcoGene:EG10522" + ], + [ + "gene_synonym", + "GI:16130512" + ], + [ + "gene_synonym", + "NP_417082.1" + ], + [ + "gene_synonym", + "ECK2585" + ], + [ + "gene_synonym", + "witA" + ], + [ + "gene_synonym", + "GeneID:947069" + ], + [ + "gene_synonym", + "b2587" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEX3" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "b2592" + ], + [ + "gene_synonym", + "ECK2590" + ], + [ + "gene_synonym", + "htpM" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63284" + ], + [ + "gene_synonym", + "clpB" + ], + [ + "gene_synonym", + "ASAP:ABE-0008527" + ], + [ + "gene_synonym", + "EcoGene:EG10157" + ] + ], + "dna_sequence": 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"yfiH" + ], + [ + "gene_synonym", + "GeneID:947089" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33644" + ], + [ + "gene_synonym", + "GI:16130514" + ], + [ + "gene_synonym", + "b2593" + ], + [ + "gene_synonym", + "ECK2591" + ], + [ + "gene_synonym", + "ASAP:ABE-0008530" + ], + [ + "gene_synonym", + "NP_417084.1" + ], + [ + "gene_synonym", + "EcoGene:EG12097" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_417086.1" + ], + [ + "gene_synonym", + "GI:16130516" + ], + [ + "gene_synonym", + "EcoGene:EG14222" + ], + [ + "gene_synonym", + "b2595" + ], + [ + "gene_synonym", + "ECK2593" + ], + [ + "gene_synonym", + "ASAP:ABE-0008536" + ] + ], + "dna_sequence": 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"protein_md5": "471cb7c8f5b737badaa0c459d8e92d62", + "protein_translation": "MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNT", + "protein_translation_length": 245, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "raiA" + ], + [ + "gene_synonym", + "GeneID:947129" + ], + [ + "gene_synonym", + "NP_417088.1" + ], + [ + "gene_synonym", + "GI:16130518" + ], + [ + "gene_synonym", + "JW2578" + ], + [ + "gene_synonym", + "ASAP:ABE-0008540" + ], + [ + "gene_synonym", + "yfiA" + ], + [ + "gene_synonym", + "ECK2594" + ], + [ + "gene_synonym", + "b2597" + ], + [ + "gene_synonym", + "EcoGene:EG11151" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD49" + ] + ], + "dna_sequence": 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"JW2579" + ], + [ + "gene_synonym", + "ASAP:ABE-0008543" + ], + [ + "gene_synonym", + "pheL" + ], + [ + "gene_synonym", + "ECK2595" + ], + [ + "gene_synonym", + "pheAE" + ], + [ + "gene_synonym", + "EcoGene:EG11271" + ], + [ + "gene_synonym", + "NP_417089.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD72" + ], + [ + "gene_synonym", + "b2598" + ] + ], + "dna_sequence": "ATGAAACACATACCGTTTTTCTTCGCATTCTTTTTTACCTTCCCCTGA", + "dna_sequence_length": 48, + "functions": [ + "pheA gene leader peptide" + ], + "id": "CDS_2577", + "location": [ + [ + "NC_000913", + 2737599, + "+", + 48 + ] + ], + "md5": "4cf0bd38b07546735b0b800bc615335c", + "parent_gene": "", + "protein_md5": "2efe0b4ae72e2aff55aa6f5f81f4505d", + "protein_translation": "MKHIPFFFAFFFTFP", + "protein_translation_length": 15, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW2580" + ], + [ + "gene_synonym", + "GeneID:947081" + ], + [ + "gene_synonym", + "pheA" + ], + [ + "gene_synonym", + "NP_417090.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0008545" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9J8" + ], + [ + "gene_synonym", + "EcoGene:EG10707" + ], + [ + "gene_synonym", + "ECK2596" + ], + [ + "gene_synonym", + "GI:16130520" + ], + [ + "gene_synonym", + "b2599" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0008547" + ], + [ + "gene_synonym", + "tyrA" + ], + [ + "gene_synonym", + "ECK2597" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07023" + ], + [ + "gene_synonym", + "GI:16130521" + ], + [ + "gene_synonym", + "b2600" + ] + ], + "dna_sequence": 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"NP_417120.2" + ], + [ + "gene_synonym", + "EcoGene:EG13201" + ], + [ + "gene_synonym", + "b2631" + ], + [ + "gene_synonym", + "ASAP:ABE-0008665" + ], + [ + "gene_synonym", + "GI:90111470" + ], + [ + "gene_synonym", + "JW5418" + ] + ], + "dna_sequence": "TTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACGAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGATCATGCTGGATACGGCCAAAATTATTGATGAGCAGGACGTTCCGACACATATCCTGAGCAAACTGACTTTTACTTTACGTAATCATCCTGAGTACCTAGAAGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGA", + "dna_sequence_length": 372, + "functions": [ + "CP4-57 prophage", + "uncharacterized protein" + ], + "id": "CDS_2608", + "location": [ + [ + "NC_000913", + 2766984, + "+", + 372 + ] + ], + "md5": "8f273558df5eb868f1560e6f4dd2936d", + "parent_gene": "", + "protein_md5": "0c066ac7ccd9f2a815dddc2a9e736501", + "protein_translation": "MFEITGINVSGALKAVVMATGFENPLSSVNEIETKLSALLGSETTGEILFDLLCANGPEWNRFVTLEMKYGRIMLDTAKIIDEQDVPTHILSKLTFTLRNHPEYLEASVLSPDDVRQVLSMDF", + "protein_translation_length": 123, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52131" + ], + [ + "gene_synonym", + "ECK2628" + ], + [ + "gene_synonym", + "EcoGene:EG13202" + ], + [ + "gene_synonym", + "GeneID:947124" + ], + [ + "gene_synonym", + "b2632" + ], + [ + "gene_synonym", + "ASAP:ABE-0008669" + ], + [ + "gene_synonym", + "yfjP" + ], + [ + "gene_synonym", + "GI:49176249" + ], + [ + "gene_synonym", + "YP_026173.1" + ], + [ + "gene_synonym", + "JW5419" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_417122.1" + ] + ], + "dna_sequence": "ATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGCAGCGGGAAGGCTTCCAGCCATTCTTTGCCTGTCAGACACGGGTACGTGACCCCCGTCGTCGTGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTAATGCTAAAGGCGGACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAG", + "dna_sequence_length": 822, + "functions": [ + "CP4-57 prophage", + "uncharacterized protein" + ], + "id": 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"ygaQ" + ], + [ + "gene_synonym", + "ASAP:ABE-0008751" + ], + [ + "gene_synonym", + "ASAP:ABE-0008739" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0008758" + ], + [ + "gene_synonym", + "GeneID:948060" + ], + [ + "gene_synonym", + "NP_417147.1" + ], + [ + "gene_synonym", + "gabD" + ], + [ + "gene_synonym", + "EcoGene:EG11329" + ], + [ + "gene_synonym", + "GI:16130575" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW2637" + ], + [ + "gene_synonym", + "ECK2656" + ], + [ + "gene_synonym", + "EcoGene:EG10361" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22256" + ], + [ + "gene_synonym", + "b2662" + ], + [ + "gene_synonym", + "NP_417148.1" + ], + [ + "gene_synonym", + "GeneID:948067" + ], + [ + "gene_synonym", + "GI:16130576" + ] + ], + "dna_sequence": 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"gene_synonym", + "ygaD" + ], + [ + "gene_synonym", + "ECK2670" + ], + [ + "gene_synonym", + "GI:16130590" + ], + [ + "gene_synonym", + "ASAP:ABE-0008808" + ], + [ + "gene_synonym", + "EcoGene:EG12381" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37146" + ] + ], + "dna_sequence": "ATGAAACTCTCACGTATCAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGATATTCCTGCCTGGCAGACATTAACTGTCGTAGAACAACAACTGACGATGCGCGTTTTTACTGGCCTGACGCTGCTCGACACGCTGCAAAATGTTATCGGCGCGCCTTCTCTGATGCCCGATGCACTCACGCCTCATGAAGAAGCGGTATTATCGAATATCAGCTTTATGGAAGCGGTTCATGCCCGCTCTTACAGTTCGATTTTCTCGACGCTATGCCAGACCAAAGATGTCGATGCCGCCTACGCCTGGAGTGAAGAAAACGCACCGTTGCAGCGAAAAGCTCAGATTATTCAGCAACATTATCGCGGTGATGATCCGCTGAAAAAGAAAATCGCCAGTGTGTTTCTTGAATCTTTTTTGTTCTATTCCGGTTTCTGGCTGCCGATGTATTTTTCCAGCCGCGGAAAGCTGACCAATACCGCGGACCTGATCCGTCTGATTATCCGCGATGAAGCAGTCCACGGTTACTACATAGGCTATAAATATCAGAAAAACATGGAAAAGATATCTCTGGGACAACGTGAAGAGTTGAAGAGTTTCGCCTTCGATTTGTTGCTGGAACTCTACGACAACGAGTTGCAATACACCGATGAGCTGTACGCCGAAACCCCGTGGGCTGACGATGTGAAAGCGTTTCTCTGTTACAACGCCAATAAGGCTTTGATGAATCTGGGCTACGAACCGTTATTTCCCGCAGAAATGGCGGAAGTGAATCCGGCAATCCTCGCCGCGCTTTCGCCGAATGCCGATGAAAATCACGATTTCTTTTCCGGTTCAGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGA", + "dna_sequence_length": 960, + "functions": [ + "ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein" + ], + "id": "CDS_2645", + "location": [ + [ + "NC_000913", + 2803502, + "+", + 960 + ] + ], + "md5": "a5ddfd27fbbff075f681be44042d04a7", + "parent_gene": "", + "protein_md5": "d30c3989e5aaef4ce73878a434b0de67", + "protein_translation": "MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF", + "protein_translation_length": 319, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW2652" + ], + [ + "gene_synonym", + "EcoGene:EG10771" + ], + [ + "gene_synonym", + "GeneID:947148" + ], + [ + "gene_synonym", + "proV" + ], + [ + "gene_synonym", + "proU" + ], + [ + "gene_synonym", + "GI:16130591" + ], + [ + "gene_synonym", + "NP_417163.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14175" + ], + [ + "gene_synonym", + "ASAP:ABE-0008814" + ], + [ + "gene_synonym", + "ECK2671" + ], + [ + "gene_synonym", + "b2677" + ], + [ + "gene_synonym", + "osrA" + ] + ], + "dna_sequence": "ATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCTGATTGATGGTGTGGATATTGCCAAAATATCCGACGCCGAACTCCGTGAGGTGCGCAGAAAAAAGATTGCGATGGTCTTCCAGTCCTTTGCCTTAATGCCGCATATGACCGTGCTGGACAATACTGCGTTCGGTATGGAATTGGCCGGAATTAATGCCGAAGAACGCCGGGAAAAAGCCCTTGATGCACTGCGTCAGGTCGGGCTGGAAAATTATGCCCACAGCTACCCGGATGAACTCTCTGGCGGGATGCGTCAACGTGTGGGATTAGCCCGCGCGTTAGCGATTAATCCGGATATATTATTAATGGACGAAGCCTTCTCGGCGCTCGATCCATTAATTCGCACCGAGATGCAGGATGAGCTGGTAAAATTACAGGCGAAACATCAGCGCACCATTGTCTTTATTTCCCACGATCTTGATGAAGCCATGCGTATTGGCGACCGAATTGCCATTATGCAAAATGGTGAAGTGGTACAGGTCGGCACACCGGATGAAATTCTCAATAATCCGGCGAATGATTATGTCCGTACCTTCTTCCGTGGCGTTGATATTAGTCAGGTATTCAGTGCGAAAGATATTGCCCGCCGGACACCGAATGGCTTAATTCGTAAAACCCCTGGCTTCGGCCCACGTTCGGCACTGAAATTATTGCAGGATGAAGATCGCGAATATGGCTACGTTATCGAACGCGGTAATAAGTTTGTCGGCGCAGTCTCCATCGATTCGCTTAAAACCGCGTTAACGCAGCAGCAAGGTCTTGATGCGGCGCTGATTGATGCGCCGTTAGCAGTCGATGCACAAACGCCTCTTAGCGAGTTGCTCTCTCATGTCGGACAGGCACCCTGTGCGGTGCCCGTGGTCGACGAGGACCAACAGTATGTCGGCATCATTTCGAAAGGAATGCTGCTGCGCGCTTTAGATCGTGAGGGGGTAAATAATGGCTGA", 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"gene_synonym", + "proX" + ], + [ + "gene_synonym", + "GeneID:947165" + ], + [ + "gene_synonym", + "GI:16130593" + ], + [ + "gene_synonym", + "ECK2673" + ], + [ + "gene_synonym", + "NP_417165.1" + ], + [ + "gene_synonym", + "osrA" + ], + [ + "gene_synonym", + "ASAP:ABE-0008818" + ] + ], + "dna_sequence": 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"dna_sequence_length": 993, + "functions": [ + "glycine betaine/proline ABC transporter periplasmic binding protein", + "cold shock protein" + ], + "id": "CDS_2648", + "location": [ + [ + "NC_000913", + 2807132, + "+", + 993 + ] + ], + "md5": "5f05ea0bc75844202a66eb177b7aff6b", + "parent_gene": "", + "protein_md5": "f88dc9aa701cbe535d01e68eb90355ee", + "protein_translation": "MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQTLLVSRALEKLGYTVNKPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKKFYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPGWGCEGAINHQLAAYELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWAEKNPAAAKLFAIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAAQK", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:2847696" + ], + [ + "gene_synonym", + "JW2655" + ], + [ + "gene_synonym", + "b2681" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76628" + ], + [ + "gene_synonym", + "EcoGene:EG13527" + ], + [ + "gene_synonym", + "ECK2674" + ], + [ + "gene_synonym", + "ygaY" + ], + [ + "gene_synonym", + "ygaX" + ], + [ + "gene_synonym", + "ASAP:ABE-0008822" + ], + [ + "gene_synonym", + "ASAP:ABE-0008824" + ] + ], + "dna_sequence": 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"EcoGene:EG11439" + ], + [ + "gene_synonym", + "NP_417171.1" + ], + [ + "gene_synonym", + "GeneID:947167" + ], + [ + "gene_synonym", + "emrB" + ], + [ + "gene_synonym", + "ECK2680" + ], + [ + "gene_synonym", + "GI:16130598" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0008842" + ], + [ + "gene_synonym", + "ygaG" + ], + [ + "gene_synonym", + "luxS" + ], + [ + "gene_synonym", + "EcoGene:EG12712" + ], + [ + "gene_synonym", + "NP_417172.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45578" + ], + [ + "gene_synonym", + "ECK2681" + ], + [ + "gene_synonym", + "GeneID:947168" + ], + [ + "gene_synonym", + "GI:16130599" + ] + ], + "dna_sequence": "ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACACCCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCCATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCAATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGCAATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGCACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCACTGCCGAAAGAGAAGTTGCAGGAACTGCACATCTAG", + "dna_sequence_length": 516, + "functions": [ + "S-ribosylhomocysteine lyase" + ], + "id": "CDS_2655", + "location": [ + [ + "NC_000913", + 2814733, + "-", + 516 + ] + ], + "md5": "bd81874366e57b86462089999e23dd3a", + "parent_gene": "", + "protein_md5": "9e01ce4838b08bee8178f00a8b68ada0", + "protein_translation": "MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEKLQELHI", + "protein_translation_length": 171, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "gshI" + ], + [ + "gene_synonym", + "JW2663" + ], + [ + "gene_synonym", + "gshA" + ], + [ + "gene_synonym", + "ASAP:ABE-0008845" + ], + [ + "gene_synonym", + "b2688" + ], + [ + "gene_synonym", + "GI:16130600" + ], + [ + "gene_synonym", + "EcoGene:EG10418" + ], + [ + "gene_synonym", + "GeneID:944881" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6W9" + ], + [ + "gene_synonym", + "NP_417173.1" + ], + [ + "gene_synonym", + "ECK2683" + ] + ], + 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"pleiotropic regulatory protein for carbon source metabolism" + ], + "id": "CDS_2659", + "location": [ + [ + "NC_000913", + 2819146, + "-", + 186 + ] + ], + "md5": "575957ef32f45516e642e916f081e8bb", + "parent_gene": "", + "protein_md5": "fc4f077eb268a92f29017fcaaedd8fa3", + "protein_translation": "MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKSQQSSY", + "protein_translation_length": 61, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW2667" + ], + [ + "gene_synonym", + "lovB" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00957" + ], + [ + "gene_synonym", + "b2697" + ], + [ + "gene_synonym", + "ASAP:ABE-0008869" + ], + [ + "gene_synonym", + "GeneID:947175" + ], + [ + "gene_synonym", + "EcoGene:EG10034" + ], + [ + "gene_synonym", + "NP_417177.1" + ], + [ + "gene_synonym", + "alaS" + ], + [ + "gene_synonym", + "ala-act" + ], + [ + "gene_synonym", + "GI:16130604" + ], + [ + "gene_synonym", + "act" + ], + [ + "gene_synonym", + "ECK2692" + ] + ], + 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"gene_synonym", + "ygaJ" + ], + [ + "gene_synonym", + "ygaI" + ], + [ + "gene_synonym", + "norV" + ], + [ + "gene_synonym", + "NP_417190.1" + ], + [ + "gene_synonym", + "EcoGene:EG12963" + ], + [ + "gene_synonym", + "JW2680" + ], + [ + "gene_synonym", + "flrd" + ], + [ + "gene_synonym", + "ECK2705" + ], + [ + "gene_synonym", + "GeneID:948979" + ], + [ + "gene_synonym", + "GI:16130617" + ], + [ + "gene_synonym", + "ASAP:ABE-0008910" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46877" + ], + [ + "gene_synonym", + "b2710" + ] + ], + "dna_sequence": 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"-", + 528 + ] + ], + "md5": "c05a0119d5aae8f75827861edfda527a", + "parent_gene": "", + "protein_md5": "cc70f09fe5af29105781fd3a8a15181b", + "protein_translation": "MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF", + "protein_translation_length": 175, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_417194.2" + ], + [ + "gene_synonym", + "b2714" + ], + [ + "gene_synonym", + "sac" + ], + [ + "gene_synonym", + "JW5434" + ], + [ + "gene_synonym", + "EcoGene:EG10087" + ], + [ + "gene_synonym", + "GeneID:947305" + ], + [ + "gene_synonym", + "ECK2709" + ], + [ + "gene_synonym", + "ASAP:ABE-0008922" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24242" + ], + [ + "gene_synonym", + "GI:345452722" + ], + [ + "gene_synonym", + "ascG" + ] + ], + "dna_sequence": 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[ + "NC_000913", + 2850647, + "+", + 351 + ] + ], + "md5": "4602eb82dc5feec29847772f95fbb9f5", + "parent_gene": "", + "protein_md5": "e0ef488a5fde62cb45115f4e5aaf1c66", + "protein_translation": "MHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSLAFCFDLVCRGSVAEGCKLHLEEQEAECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVADDGLQIRRIEIDQE", + "protein_translation_length": 116, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG10484" + ], + [ + "gene_synonym", + "b2727" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAN3" + ], + [ + "gene_synonym", + "JW2697" + ], + [ + "gene_synonym", + "ASAP:ABE-0008960" + ], + [ + "gene_synonym", + "GeneID:947194" + ], + [ + "gene_synonym", + "ECK2722" + ], + [ + "gene_synonym", + "hydB" + ], + [ + "gene_synonym", + "hydE" + ], + [ + "gene_synonym", + "NP_417207.1" + ], + [ + "gene_synonym", + "GI:16130634" + ], + [ + "gene_synonym", + "hypB" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_417208.1" + ] + ], + "dna_sequence": "ATGTGCATAGGCGTTCCCGGCCAGATCCGCACCATTGACGGCAACCAGGCGAAAGTCGACGTCTGCGGCATTCAGCGCGATGTCGATTTAACGTTAGTCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAA", + "dna_sequence_length": 273, + "functions": [ + "hydrogenase maturation protein" + ], + "id": "CDS_2691", + "location": [ + [ + "NC_000913", + 2851864, + "+", + 273 + ] + ], + "md5": "48eaf222d711ce58bcdfa597b4025a9b", + "parent_gene": "", + "protein_md5": "7d03db32baa353bf74d064d746359a3b", + "protein_translation": "MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEEK", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG10486" + ], + [ + "gene_synonym", + "JW2699" + ], + [ + "gene_synonym", + "ECK2724" + ], + [ + "gene_synonym", + "ASAP:ABE-0008965" + ], + [ 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"EcoGene:EG10301" + ], + [ + "gene_synonym", + "GI:16130638" + ], + [ + "gene_synonym", + "ECK2726" + ], + [ + "gene_synonym", + "GeneID:947181" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19323" + ], + [ + "gene_synonym", + "NP_417211.1" + ] + ], + "dna_sequence": 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"MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKRLDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRPVPELPEKYRPKKPHE", + "protein_translation_length": 117, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b2733" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23909" + ], + [ + "gene_synonym", + "NP_417213.1" + ], + [ + "gene_synonym", + "JW2703" + ], + [ + "gene_synonym", + "GI:16130640" + ], + [ + "gene_synonym", + "ASAP:ABE-0008977" + ], + [ + "gene_synonym", + "ant" + ], + [ + "gene_synonym", + "mutS" + ], + [ + "gene_synonym", + "EcoGene:EG10625" + ], + [ + "gene_synonym", + "fdv" + ], + [ + "gene_synonym", + "plm" + ], + [ + "gene_synonym", + "ECK2728" + ], + [ + "gene_synonym", + "GeneID:947206" + ] + ], + "dna_sequence": 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"MEPFKYICHYWGKSSKSLTKGNDIHLLIYHCLDVAAVADCWWDQSVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLNGPSTQMCRKFNHGAAGLYWFNQDSLSEQSLGDFFSFFDAAPHPYESWFPWVEAVTGHHGFILHSQDQDKSRWEMPASLASYAAQDKQAREEWISVLEALFLTPAGLSINDIPPDCSSLLAGFCSLADWLGSWTTTNTFLFNEDAPSDINALRTYFQDRQQDASRVLELSGLVSNKRCYEGVHALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENNSAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPICLADMLPDLTMLERMIAAANAGAQVCLICNLVDVAQVCYQRLKELNNTQVDIDLFHARFTLNDRREKENRVISNFGKNGKRNVGRILVATQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHHRKYRPAGFEIPVATILLPDGEGYGRHEHIYSNVRVMWRTQQHIEELNGASLFFPDAYRQWLDSIYDDAEMDEPEWVGNGMDKFESAECEKRFKARKVLQWAEEYSLQDNDETILAVTRDGEMSLPLLPYVQTSSGKQLLDGQVYEDLSHEQQYEALALNRVNVPFTWKRSFSEVVDEDGLLWLEGKQNLDGWVWQGNSIVITYTGDEGMTRVIPANPK", + "protein_translation_length": 888, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "cysH" + ], + [ + "gene_synonym", + "JW2732" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17854" + ], + [ + "gene_synonym", + "ASAP:ABE-0009057" + ], + [ + "gene_synonym", + "EcoGene:EG10189" + ], + [ + "gene_synonym", + "ECK2757" + ], + [ + "gene_synonym", + "b2762" + ], + [ + "gene_synonym", + "NP_417242.1" + ], + [ + "gene_synonym", + "GI:16130669" + ], + [ + "gene_synonym", + "GeneID:947230" + ] + ], + "dna_sequence": "ATGTCCAAACTCGATCTAAACGCCCTGAACGAACTGCCGAAGGTAGATCGCATTCTGGCGCTGGCGGAAACTAACGCCGAACTGGAAAAACTGGACGCTGAAGGCCGCGTAGCCTGGGCGCTGGATAATCTGCCCGGTGAATATGTACTTTCTTCCAGCTTTGGCATTCAGGCGGCGGTGAGCCTGCATCTGGTGAATCAAATTCGCCCGGATATTCCGGTGATCCTCACCGATACGGGTTACTTGTTCCCGGAAACCTACCGCTTTATTGACGAGTTAACGGACAAACTCAAGCTCAACCTGAAAGTGTACCGTGCTACCGAAAGCGCAGCCTGGCAGGAAGCACGCTACGGAAAACTGTGGGAGCAGGGCGTTGAAGGCATTGAAAAGTACAATGACATCAACAAAGTCGAACCGATGAACCGGGCTCTGAAAGAACTGAATGCGCAAACCTGGTTTGCTGGCCTGCGCCGTGAACAATCCGGCAGTCGTGCCAATTTACCGGTGCTGGCAATTCAGCGTGGCGTATTTAAAGTGCTGCCGATTATCGACTGGGATAACCGAACTATTTATCAGTACCTGCAAAAACATGGCCTGAAATATCACCCATTATGGGATGAAGGATATTTATCGGTGGGCGATACCCATACAACCCGTAAATGGGAACCCGGCATGGCGGAAGAAGAAACGCGTTTCTTTGGCTTAAAAAGGGAATGTGGGTTACACGAAGGGTAA", + "dna_sequence_length": 735, + "functions": [ + "phosphoadenosine phosphosulfate reductase", + "PAPS reductase, thioredoxin dependent" + ], + "id": "CDS_2725", + "location": [ + [ + "NC_000913", + 2888312, + "-", + 735 + ] + ], + "md5": "9cc9595e0a15607bc6a7f6672862bc4a", + "parent_gene": "", + "protein_md5": "3133b183438b1574006ba1d1d4458b3e", + "protein_translation": "MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG", + "protein_translation_length": 244, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009061" + ], + [ + "gene_synonym", + "cysI" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17846" + ], + [ + "gene_synonym", + "JW2733" + ], + [ + "gene_synonym", + "b2763" + ], + [ + "gene_synonym", + "EcoGene:EG10190" + ], + [ + "gene_synonym", + "GI:16130670" + ], + [ + "gene_synonym", + "NP_417243.1" + ], + [ + "gene_synonym", + "ECK2758" + ], + [ + "gene_synonym", + "GeneID:947231" + ] + ], + "dna_sequence": "ATGAGCGAAAAACATCCAGGGCCTTTAGTGGTCGAAGGAAAACTGACAGACGCCGAGCGCATGAAGCATGAAAGCAACTACCTGCGCGGCACCATTGCGGAAGATTTAAACGACGGTCTGACCGGCGGCTTTAAGGGCGACAACTTCCTGCTGATTCGCTTCCACGGCATGTATCAGCAGGATGACCGCGACATCCGCGCCGAACGTGCTGAACAGAAGCTGGAGCCGCGCCACGCGATGCTGCTTCGCTGTCGTCTGCCGGGTGGGGTGATTACCACTAAACAGTGGCAGGCGATCGACAAATTTGCCGGTGAAAACACCATCTATGGCAGCATTCGCCTGACCAACCGCCAGACGTTTCAGTTCCACGGCATTCTGAAAAAGAACGTCAAACCGGTGCACCAGATGCTGCACTCGGTCGGTCTTGATGCGCTGGCGACAGCTAACGACATGAACCGTAACGTACTCTGCACCTCGAACCCTTACGAGTCGCAGCTGCACGCGGAAGCGTACGAGTGGGCGAAGAAGATTTCTGAGCATCTGTTGCCTCGTACCCGCGCGTATGCGGAGATCTGGCTCGACCAGGAAAAAGTCGCCACTACTGATGAAGAACCGATCCTCGGCCAGACCTACCTGCCGCGTAAATTCAAAACCACGGTAGTGATCCCGCCACAGAACGATATCGATCTGCACGCCAACGACATGAACTTCGTGGCGATCGCCGAAAACGGCAAGCTGGTGGGCTTTAACCTGTTGGTGGGCGGTGGGCTTTCCATCGAACACGGCAACAAGAAAACCTACGCCCGCACCGCGAGTGAGTTTGGCTATCTGCCGCTGGAGCATACGCTGGCGGTGGCCGAAGCCGTCGTGACAACTCAGCGTGACTGGGGTAACCGAACCGATCGTAAAAATGCCAAAACCAAATACACGCTGGAGCGCGTGGGGGTTGAGACGTTTAAAGCGGAAGTGGAGCGTCGCGCGGGGATCAAATTTGAACCGATCCGTCCATATGAGTTCACCGGACGAGGCGATCGTATTGGCTGGGTTAAGGGCATTGATGATAACTGGCACCTGACGCTGTTTATCGAAAATGGTCGCATCCTTGATTATCCGGCGCGTCCGCTGAAAACCGGCCTGCTGGAGATCGCGAAGATCCACAAAGGCGATTTCCGCATTACGGCGAACCAGAATCTGATCATCGCCGGTGTACCGGAAAGCGAGAAAGCGAAGATCGAGAAGATCGCCAAAGAGAGCGGGTTAATGAATGCCGTCACGCCGCAGCGTGAAAACTCGATGGCTTGCGTGTCATTCCCGACTTGCCCGCTGGCGATGGCGGAAGCAGAGCGTTTCCTGCCGTCTTTTATCGACAACATCGATAATTTAATGGCGAAACATGGTGTCAGCGATGAGCATATCGTGATGCGTGTAACAGGCTGCCCGAACGGTTGTGGTCGCGCGATGCTGGCGGAAGTGGGCCTGGTGGGTAAAGCGCCGGGTCGCTACAACCTGCATCTTGGCGGCAACCGCATTGGGACACGTATCCCACGGATGTATAAAGAAAACATCACCGAGCCGGAAATCCTGGCGTCGCTTGATGAACTGATAGGGCGCTGGGCGAAAGAGCGCGAAGCGGGTGAAGGCTTCGGCGACTTTACGGTGCGTGCGGGCATCATTCGCCCGGTGCTCGATCCGGCGCGTGATTTGTGGGATTAA", 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"ASAP:ABE-0009131" + ], + [ + "gene_synonym", + "GeneID:947255" + ], + [ + "gene_synonym", + "barA" + ], + [ + "gene_synonym", + "airS" + ], + [ + "gene_synonym", + "NP_417266.1" + ], + [ + "gene_synonym", + "b2786" + ], + [ + "gene_synonym", + "EcoGene:EG11367" + ], + [ + "gene_synonym", + "gacC" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEC5" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "GeneID:947258" + ], + [ + "gene_synonym", + "GI:16130694" + ], + [ + "gene_synonym", + "ECK2781" + ], + [ + "gene_synonym", + "EcoGene:EG13167" + ], + [ + "gene_synonym", + "ygcX" + ], + [ + "gene_synonym", + "NP_417267.1" + ], + [ + "gene_synonym", + "gudD" + ], + [ + "gene_synonym", + "JW2758" + ], + [ + "gene_synonym", + "ASAP:ABE-0009134" + ], + [ + "gene_synonym", + "b2787" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AES2" + ] + ], + "dna_sequence": 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"GTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGCCCTGTGTCGAAACCTGCCAGCATGCGCTCGATCAGCTCATTATGCACAGCCAGCCAACCCACGCGGTCGCCGTTTTTGATGATGAAAACCGCAGTAGCGGCTGGCGTCATCAGCGTTTACCAGATTACAAAGCGGGTCGACCGCCAATGCCGGAAGAGTTGCACGACGAGATGCCTGCATTACGCGCCGCCTTTGAGCAACGCGGCGTCCCGTGCTGGTCAACCAGCGGCAACGAAGCCGATGACTTAGCCGCCACGCTGGCGGTCAAAGTGACACAGGCCGGGCATCAGGCAACGATTGTTTCGACAGATAAAGGCTACTGTCAGTTACTTTCACCGACATTACGTATTCGTGATTACTTCCAGAAACGTTGGCTGGATGCGCCATTTATCGATAAAGAATTTGGCGTTCAACCGCAGCAGTTGCCCGATTACTGGGGACTTGCGGGGATCAGCAGTTCAAAGGTACCGGGTGTTGCGGGAATCGGACCAAAAAGCGCCACGCAGCTGCTGGTCGAGTTTCAGAGTCTGGAAGGGATATATGAGAATCTGGATGCGGTTGCCGAAAAGTGGCGCAAAAAATTAGAAACCCATAAAGAGATGGCGTTTCTGTGCCGCGATATTGCCCGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAA", + "dna_sequence_length": 756, + "functions": [ + "Ssb-binding protein, misidentified as ExoIX" + ], + "id": "CDS_2761", + "location": [ + [ + "NC_000913", + 2931055, + "+", + 756 + ] + ], + "md5": "860d8d6f709a8fc397a0b82581073ad8", + 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"JW2771" + ], + [ + "gene_synonym", + "NP_417280.1" + ], + [ + "gene_synonym", + "GeneID:947282" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB87" + ], + [ + "gene_synonym", + "EcoGene:EG10348" + ], + [ + "gene_synonym", + "GI:16130707" + ], + [ + "gene_synonym", + "ASAP:ABE-0009179" + ] + ], + "dna_sequence": "ATGGAACGAAATAAACTTGCTCGTCAGATTATTGACACTTGCCTGGAAATGACCCGCCTGGGACTGAACCAGGGGACAGCGGGGAACGTCAGTGTACGTTATCAGGATGGGATGCTGATTACGCCTACAGGCATTCCATATGAAAAACTGACGGAGTCGCATATTGTCTTTATTGATGGCAACGGTAAACATGAGGAAGGAAAGCTCCCCTCAAGCGAATGGCGTTTCCATATGGCAGCCTATCAAAGCAGACCGGATGCCAACGCGGTTGTTCACAATCATGCCGTTCATTGCACGGCAGTTTCCATTCTTAACCGATCGATCCCCGCTATTCACTACATGATTGCGGCGGCTGGCGGTAATTCTATTCCTTGCGCGCCTTATGCGACCTTTGGAACACGCGAACTTTCTGAACATGTTGCGCTGGCTCTCAAAAATCGTAAGGCAACTTTGTTACAACATCATGGGCTTATCGCTTGTGAGGTGAATCTGGAAAAAGCGTTATGGCTGGCGCATGAAGTTGAAGTGCTGGCGCAACTTTACCTGACGACCCTGGCGATTACGGACCCGGTGCCAGTGCTGAGCGATGAAGAGATTGCCGTAGTGCTGGAGAAATTCAAAACCTATGGGTTACGAATTGAAGAGTAA", + "dna_sequence_length": 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"gene_synonym", + "GI:16130709" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69922" + ], + [ + "gene_synonym", + "EcoGene:EG10349" + ], + [ + "gene_synonym", + "GeneID:946195" + ], + [ + "gene_synonym", + "NP_417282.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0009189" + ] + ], + "dna_sequence": 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"gene_synonym", + "b2803" + ], + [ + "gene_synonym", + "GI:674842733" + ], + [ + "gene_synonym", + "JW2774" + ], + [ + "gene_synonym", + "fucK" + ], + [ + "gene_synonym", + "GeneID:946022" + ], + [ + "gene_synonym", + "NP_417283.2" + ], + [ + "gene_synonym", + "ASAP:ABE-0009191" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11553" + ], + [ + "gene_synonym", + "EcoGene:EG10350" + ], + [ + "gene_synonym", + "ECK2798" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW2775" + ], + [ + "gene_synonym", + "ECK2799" + ], + [ + "gene_synonym", + "fucU" + ], + [ + "gene_synonym", + "EcoGene:EG10355" + ], + [ + "gene_synonym", + "GI:16130711" + ], + [ + "gene_synonym", + "ASAP:ABE-0009193" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEN8" + ] + ], + "dna_sequence": "ATGCTGAAAACAATTTCGCCGTTAATTTCTCCCGAACTATTGAAAGTGCTGGCAGAGATGGGACATGGAGATGAAATTATTTTTTCCGATGCTCACTTTCCCGCCCATTCGATGGGACCGCAGGTGATCCGCGCTGATGGCCTGTTGGTGAGCGACTTGCTCCAGGCGATTATCCCGTTATTTGAACTGGACAGTTATGCACCGCCGCTGGTGATGATGGCGGCGGTAGAAGGTGACACTCTCGATCCTGAAGTAGAACGACGTTACCGTAATGCGCTTTCACTACAAGCCCCGTGTCCTGACATCATCCGCATCAATCGTTTTGCGTTTTATGAACGGGCGCAAAAAGCCTTTGCGATCGTTATCACAGGCGAACGAGCGAAGTACGGGAATATTCTTTTAAAAAAAGGGGTAACACCGTAA", + "dna_sequence_length": 423, + "functions": [ + "L-fucose mutarotase" + ], + "id": "CDS_2767", + "location": [ + [ + "NC_000913", + 2938888, + "+", + 423 + ] + ], + "md5": "2ca36b6e861754c32648c7f66c9e54d0", + "parent_gene": "", + "protein_md5": 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"gene_synonym", + "ECK2807" + ], + [ + "gene_synonym", + "ygdK" + ], + [ + "gene_synonym", + "GI:16130718" + ], + [ + "gene_synonym", + "GeneID:947274" + ], + [ + "gene_synonym", + "ASAP:ABE-0009220" + ], + [ + "gene_synonym", + "NP_417291.1" + ], + [ + "gene_synonym", + "csdE" + ] + ], + "dna_sequence": "ATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCATGCTGGGGAAACAGCTTCCGGCATTGCCAGACGAGTTAAAAGCGCAGGCTAAAGAGATTGCCGGATGCGAAAACCGCGTCTGGCTGGGATATACAGTGGCTGAAAACGGCAAAATGCATTTCTTTGGCGACAGCGAAGGGCGCATTGTGCGCGGCCTGCTGGCGGTGTTGTTGACTGCCGTTGAGGGGAAAACCGCCGCCGAGTTGCAGGCACAGTCACCACTGGCATTGTTTGATGAGCTGGGATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAA", + "dna_sequence_length": 444, + "functions": [ + "CsdA-binding activator", + "Fe-S protein" + ], + "id": "CDS_2774", + "location": [ + [ + "NC_000913", + 2944542, + "+", + 444 + ] + ], + "md5": "57225080affacdd1d532b14d66f2fc5b", + "parent_gene": 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2945842, + "-", + 807 + ] + ], + "md5": "fcae45b6217b1169fc70e0ba7b800974", + "parent_gene": "", + "protein_md5": "32cd920929ed503e35d0911bc3b6f973", + "protein_translation": "MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMSVGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGTVCAMKATAEGPKRMDCASGFGAATMVTATFGFVAVSHALKKMMAKAARQG", + "protein_translation_length": 268, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG13085" + ], + [ + "gene_synonym", + "b2813" + ], + [ + "gene_synonym", + "ECK2809" + ], + [ + "gene_synonym", + "JW2784" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A935" + ], + [ + "gene_synonym", + "ygdM" + ], + [ + "gene_synonym", + "GeneID:944964" + ], + [ + "gene_synonym", + "NP_417293.1" + ], + [ + "gene_synonym", + "mlt" + ], + [ + "gene_synonym", + "ASAP:ABE-0009228" + ], + [ + "gene_synonym", + "mltA" + ], + [ + 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}, + { + "aliases": [ + [ + "gene_synonym", + "NP_417297.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08394" + ], + [ + "gene_synonym", + "recB" + ], + [ + "gene_synonym", + "JW2788" + ], + [ + "gene_synonym", + "ECK2816" + ], + [ + "gene_synonym", + "ior" + ], + [ + "gene_synonym", + "rorA" + ], + [ + "gene_synonym", + "b2820" + ], + [ + "gene_synonym", + "ASAP:ABE-0009249" + ], + [ + "gene_synonym", + "GI:16130724" + ], + [ + "gene_synonym", + "EcoGene:EG10824" + ], + [ + "gene_synonym", + "GeneID:947286" + ] + ], + "dna_sequence": 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"MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLEEIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETLASRHAQIVARIDTVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIDKISAWAEEETNSYQLPESLEKFSQRFLEDRTKAGGETPRHPLFEAIDQLLAEPLSIRDLVITRALAEIRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDVVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPWQVNDVSTAELNAKTLQRLPGDNWRVTSYSGLQQRGHGIAQDLMPRLDVDAAGVASVVEEPTLTPHQFPRGASPGTFLHSLFEDLDFTQPVDPNWVREKLELGGFESQWEPVLTEWITAVLQAPLNETGVSLSQLSARNKQVEMEFYLPISEPLIASQLDTLIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGEDSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYEHHFGGVIYLFLRGVDKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA", + "protein_translation_length": 1180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05458" + ], + [ + "gene_synonym", + "EcoGene:EG10786" + ], + [ + "gene_synonym", + "ECK2817" + ], + [ + "gene_synonym", + "JW2789" + ], + [ + "gene_synonym", + "b2821" + ], + [ + "gene_synonym", + "GI:16130725" + ], + [ + "gene_synonym", + "GeneID:947284" + ], + [ + "gene_synonym", + "ASAP:ABE-0009252" + ], + [ + "gene_synonym", + "NP_417298.1" + ], + [ + "gene_synonym", + "ptr" + ], + [ + "gene_synonym", + "ptrA" + ] + ], + "dna_sequence": "ATGCCCCGCAGCACCTGGTTCAAAGCATTATTGTTGTTAGTTGCCCTTTGGGCACCCTTAAGTCAGGCAGAAACGGGATGGCAGCCGATTCAGGAAACCATCCGTAAAAGTGATAAAGATAACCGCCAGTATCAGGCTATACGTCTGGATAACGGTATGGTGGTCTTGCTGGTTTCTGATCCGCAGGCAGTTAAATCGCTCTCGGCGCTGGTGGTGCCCGTTGGGTCGCTGGAAGATCCCGAGGCGTACCAGGGGCTGGCACATTACCTTGAACATATGAGTCTGATGGGGTCGAAAAAGTACCCGCAGGCTGACAGTCTGGCCGAATATCTCAAAATGCACGGCGGTAGTCACAATGCCAGCACTGCGCCGTATCGCACGGCTTTCTATCTGGAAGTTGAGAACGACGCCTTGCCTGGTGCGGTAGACCGCCTGGCCGATGCTATTGCTGAACCTTTGCTCGACAAGAAATATGCCGAACGTGAGCGTAATGCGGTGAACGCTGAATTAACCATGGCGCGTACGCGTGACGGGATGCGCATGGCACAGGTCAGCGCAGAAACCATTAACCCGGCACACCCCGGTTCAAAGTTTTCTGGTGGTAACCTCGAAACTTTAAGCGACAAACCTGGTAATCCGGTGCAGCAGGCGCTGAAAGATTTCCACGAGAAGTACTATTCCGCCAATTTGATGAAGGCGGTTATTTACAGTAATAAACCGCTGCCGGAGTTGGCAAAAATGGCGGCGGACACCTTTGGTCGCGTGCCGAACAAAGAGAGCAAAAAACCGGAAATCACCGTGCCGGTAGTCACCGACGCGCAAAAGGGCATTATCATTCATTACGTCCCTGCGCTGCCGCGTAAAGTGTTGCGCGTTGAGTTTCGCATCGATAACAACTCAGCGAAGTTCCGTAGTAAAACCGATGAATTGATTACCTATCTGATTGGCAATCGCAGCCCAGGTACACTTTCTGACTGGCTGCAAAAGCAGGGATTAGTTGAGGGCATTAGCGCCAACTCCGATCCTATCGTCAACGGCAACAGCGGCGTATTAGCGATCTCTGCGTCTTTAACCGATAAAGGCCTGGCTAATCGCGATCAGGTTGTGGCGGCAATTTTTAGCTATCTCAATCTGTTACGTGAAAAAGGCATTGATAAACAATACTTCGATGAACTGGCGAATGTGCTGGATATCGACTTCCGTTATCCGTCGATCACCCGTGATATGGATTACGTCGAATGGCTGGCAGATACCATGATTCGCGTTCCTGTTGAGCATACGCTGGATGCAGTCAATATTGCCGATCGGTACGATGCTAAAGCAGTAAAGGAACGTCTGGCGATGATGACGCCGCAGAATGCGCGTATCTGGTATATCAGCCCGAAAGAGCCGCACAACAAAACGGCTTACTTTGTCGATGCGCCGTATCAGGTCGATAAAATCAGCGCACAAACTTTCGCCGACTGGCAGAAAAAAGCCGCCGACATTGCGCTCTCTTTGCCAGAGCTTAACCCTTATATTCCTGATGATTTCTCGCTGATTAAGTCAGAGAAGAAATACGACCATCCAGAGCTGATTGTTGATGAGTCGAATCTGCGCGTGGTGTATGCGCCAAGCCGTTATTTTGCCAGCGAGCCCAAAGCTGATGTCAGCCTGATTTTGCGTAATCCGAAAGCCATGGACAGCGCCCGCAATCAGGTGATGTTTGCGCTCAATGATTATCTCGCAGGGCTGGCGCTTGATCAGTTAAGCAACCAGGCGTCGGTTGGTGGCATAAGTTTTTCCACCAACGCTAACAACGGCCTTATGGTTAATGCTAATGGTTACACCCAGCGTCTGCCGCAGCTGTTCCAGGCATTGCTCGAGGGGTACTTTAGCTATACCGCTACGGAAGATCAGCTTGAGCAGGCGAAGTCCTGGTATAACCAGATGATGGATTCCGCAGAAAAGGGTAAAGCGTTTGAGCAGGCGATTATGCCCGCGCAGATGCTCTCGCAAGTGCCGTACTTCTCGCGAGATGAACGGCGTAAAATTTTGCCCTCCATTACGTTGAAAGAGGTGCTGGCCTATCGCGACGCCTTAAAATCAGGGGCTCGACCAGAGTTTATGGTTATCGGCAACATGACCGAGGCCCAGGCAACAACGCTGGCACGCGATGTGCAAAAACAGTTGGGCGCTGATGGTTCAGAGTGGTGTCGAAACAAAGATGTAGTGGTCGATAAAAAACAATCCGTCATCTTTGAAAAAGCCGGTAACAGCACCGACTCCGCACTGGCAGCGGTATTTGTACCGACTGGCTACGATGAATACACCAGCTCAGCCTATAGCTCTCTGTTGGGGCAGATCGTACAGCCGTGGTTCTACAATCAGTTGCGTACCGAAGAACAATTGGGCTATGCCGTGTTTGCGTTTCCAATGAGCGTGGGGCGTCAGTGGGGCATGGGCTTCCTTTTGCAAAGCAATGATAAACAGCCTTCATTCTTGTGGGAGCGTTACAAGGCGTTTTTCCCAACCGCAGAGGCAAAATTGCGAGCGATGAAGCCAGATGAGTTTGCGCAAATCCAGCAGGCGGTAATTACCCAGATGCTGCAGGCACCGCAAACGCTCGGCGAAGAAGCATCGAAGTTAAGTAAAGATTTCGATCGCGGCAATATGCGCTTCGATTCGCGTGATAAAATCGTGGCCCAGATAAAACTGCTGACGCCGCAAAAACTTGCTGATTTCTTCCATCAGGCGGTGGTCGAGCCGCAAGGCATGGCTATTCTGTCGCAGATTTCCGGCAGCCAGAACGGGAAAGCCGAATATGTACACCCTGAAGGCTGGAAAGTGTGGGAGAACGTCAGCGCGTTGCAGCAAACAATGCCCCTGATGAGTGAAAAGAATGAGTGA", 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"MPRSTWFKALLLLVALWAPLSQAETGWQPIQETIRKSDKDNRQYQAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKGIIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEPHNKTAYFVDAPYQVDKISAQTFADWQKKAADIALSLPELNPYIPDDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEWCRNKDVVVDKKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVVEPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEKNE", + "protein_translation_length": 962, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW2790" + ], + [ + "gene_synonym", + "EcoGene:EG10825" + ], + [ + "gene_synonym", + "NP_417299.1" + ], + [ + "gene_synonym", + "recC" + ], + [ + "gene_synonym", + "b2822" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07648" + ], + [ + "gene_synonym", + "ASAP:ABE-0009255" + ], + [ + "gene_synonym", + "GeneID:947294" + ], + [ + "gene_synonym", + "GI:16130726" + ], + [ + "gene_synonym", + "ECK2818" + ] + ], + "dna_sequence": "ATGTTAAGGGTCTACCATTCCAATCGTCTGGACGTGCTGGAAGCGTTGATGGAGTTTATTGTCGAACGCGAACGGCTGGACGATCCTTTCGAACCAGAGATGATTCTGGTGCAAAGTACCGGTATGGCACAGTGGCTGCAAATGACCCTGTCGCAAAAGTTTGGTATTGCGGCAAACATTGATTTTCCGCTGCCAGCGAGCTTTATCTGGGATATGTTCGTCCGGGTGTTACCGGAAATCCCCAAAGAGAGCGCCTTTAACAAACAGAGCATGAGCTGGAAACTGATGACTCTGCTGCCGCAATTGCTGGAGCGCGAAGACTTTACCCTGTTGCGGCATTATCTGACTGACGATAGCGACAAGCGAAAACTGTTCCAGCTTTCCTCAAAAGCGGCGGACCTGTTTGACCAGTATCTGGTCTATCGTCCGGACTGGCTGGCACAGTGGGAAACAGGACATTTGGTTGAAGGGCTGGGAGAAGCACAGGCCTGGCAAGCCCCGTTGTGGAAGGCGCTGGTGGAATATACCCATCAACTCGGGCAACCGCGCTGGCACCGCGCCAATCTCTATCAGCGCTTTATCGAAACGCTGGAGTCCGCGACGACCTGCCCGCCGGGGTTACCTTCGCGCGTCTTTATATGCGGTATTTCCGCGTTACCGCCTGTTTATCTCCAGGCGCTACAGGCGCTGGGTAAACATATTGAAATCCATCTCCTGTTTACCAACCCCTGCCGTTATTACTGGGGCGATATTAAAGATCCTGCTTATCTGGCGAAACTGCTGACCCGTCAGCGTCGACACAGTTTTGAAGATCGCGAATTGCCGCTATTTCGTGATAGCGAAAATGCCGGGCAGCTCTTTAACAGCGATGGTGAACAGGATGTCGGCAACCCGCTGCTGGCTTCATGGGGTAAGCTTGGGCGCGACTACATTTATCTCCTTTCTGACCTGGAGAGCAGCCAGGAGCTGGACGCCTTTGTCGATGTCACGCCAGATAACCTGCTGCATAACATTCAGTCTGACATTCTGGAACTGGAAAACCGCGCCGTTGCTGGTGTGAACATCGAAGAGTTTTCCCGTAGCGATAACAAACGCCCGCTTGATCCACTGGATAGCAGTATCACCTTCCACGTTTGCCATAGCCCGCAGCGTGAAGTTGAAGTTTTACACGATCGCCTGCTGGCGATGCTGGAGGAAGACCCGACACTTACTCCGCGCGACATCATCGTGATGGTGGCTGATATCGACAGCTACAGTCCGTTTATTCAGGCTGTGTTTGGTAGCGCACCTGCGGATCGTTACCTACCTTACGCCATTTCCGACCGTCGTGCGCGGCAGTCACATCCGGTACTGGAAGCGTTTATCAGCCTGTTATCACTGCCTGACAGTCGTTTTGTGTCAGAGGATGTGCTGGCGTTGCTGGATGTGCCGGTGCTGGCGGCGCGGTTTGACATCACCGAAGAAGGGCTGCGTTATTTACGCCAGTGGGTCAACGAATCCGGCATTCGTTGGGGCATAGATGACGACAACGTTCGCGAGCTGGAACTCCCCGCCACCGGACAACACACCTGGCGATTTGGCCTGACGCGTATGTTGTTGGGCTACGCGATGGAGAGCGCGCAGGGCGAGTGGCAATCGGTTCTACCTTATGATGAATCGAGCGGCTTAATTGCAGAACTGGTGGGGCATCTGGCTTCACTGCTAATGCAGCTAAACATCTGGCGTCGCGGGCTGGCACAGGAGCGTCCGCTGGAAGAGTGGTTGCCGGTTTGTCGCGATATGCTCAACGCCTTCTTCCTGCCGGATGCGGAAACCGAAGCGGCGATGACGCTGATCGAACAACAATGGCAGGCGATTATCGCCGAAGGTTTAGGTGCGCAGTATGGCGACGCGGTGCCGCTGTCACTATTGCGTGATGAACTGGCACAGCGTCTGGATCAAGAACGTATCAGCCAGCGTTTTCTCGCCGGACCGGTTAACATTTGTACTCTGATGCCAATGCGTTCAATTCCGTTCAAAGTGGTTTGCCTGCTGGGAATGAACGACGGCGTTTATCCACGTCAGCTTGCGCCATTGGGCTTTGACCTGATGAGCCAGAAACCGAAGCGTGGCGACCGTAGCCGTCGCGATGACGACCGCTATCTGTTCCTGGAAGCGTTAATTTCCGCGCAGCAAAAACTCTATATCAGCTATATCGGTCGTTCCATTCAGGATAACAGTGAGCGTTTCCCGTCGGTACTGGTGCAGGAACTGATCGACTACATCGGGCAAAGTCATTATCTACCGGGCGATGAAGCGCTCAACTGTGATGAAAGCGAGGCAAGGGTAAAAGCGCATCTTACTTGCCTCCATACCCGGATGCCGTTTGATCCACAAAACTACCAGCCAGGCGAACGACAAAGCTATGCTCGTGAATGGCTACCTGCGGCCAGCCAGGCTGGTAAAGCACATTCTGAATTTGTTCAGCCGCTGCCGTTTACCTTACCGGAAACCGTGCCGCTGGAAACGCTACAACGATTCTGGGCACATCCGGTGCGGGCATTTTTCCAGATGCGTTTGCAGGTGAACTTCCGTACTGAAGACAGCGAAATCCCCGACACCGAGCCATTTATTCTGGAAGGACTTAGCCGTTATCAAATCAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGCTTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAGAGTCATTGCCTGTCGCCAGCCGGGGCAGAGTATGGAAATTGATCTCGCCTGCAACGGTGTGCAGATAACTGGCTGGTTGCCGCAGGTGCAGCCGGATGGCCTGTTGCGCTGGCGTCCCTCTTTATTAAGTGTGGCCCAGGGAATGCAACTTTGGCTGGAACACCTTGTCTACTGTGCCAGCGGTGGTAATGGTGAAAGTCGCCTTTTTCTACGCAAAGACGGCGAGTGGCGTTTTCCGCCGCTTGCAGCCGAACAGGCTTTGCATTACCTCTCACAACTGATTGAGGGGTATCGTGAAGGAATGTCCGCGCCATTGCTGGTGTTACCTGAAAGTGGCGGCGCGTGGCTAAAAACCTGTTATGACGCGCAAAACGATGCCATGCTGGATGACGATTCCACGTTGCAAAAAGCCCGTACGAAATTCCTTCAGGCTTACGAAGGCAACATGATGGTGCGTGGCGAAGGTGATGATATCTGGTATCAAAGGCTCTGGCGGCAATTAACACCAGAGACAATGGAGGCCATCGTTGAACAGTCGCAACGTTTCCTGTTACCGCTGTTTCGCTTTAATCAGTCATGA", 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"transcriptional activator of lysA", + "autorepressor" + ], + "id": "CDS_2799", + "location": [ + [ + "NC_000913", + 2979021, + "+", + 936 + ] + ], + "md5": "145802e895635277c0bdb5b1fc77c7c9", + "parent_gene": "", + "protein_md5": "8f06cdf609cc9068d25506aa8d5385fe", + "protein_translation": "MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEKVIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLPVFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTERTELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKRRMIVETHSAASVCAMVRAGVGISVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLHRPSSALVQAFSGHLQAGLPKLVTSLDAILSSATTA", + "protein_translation_length": 311, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ygeA" + ], + [ + "gene_synonym", + "ECK2838" + ], + [ + "gene_synonym", + "NP_417317.1" + ], + [ + "gene_synonym", + "GI:16130744" + ], + [ + "gene_synonym", + "JW2808" + ], + [ + "gene_synonym", + "GeneID:947348" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03813" + ], + [ + "gene_synonym", + "ASAP:ABE-0009315" + ], + [ + "gene_synonym", + "b2840" + ], + [ + "gene_synonym", + "EcoGene:EG11157" + ] + ], + "dna_sequence": "ATGAAAACAATTGGTTTGCTGGGAGGAATGAGCTGGGAATCCACCATTCCTTACTATCGTTTGATAAATGAAGGCATTAAACAGCGGCTTGGTGGGCTTCACTCTGCGCAAGTGCTGCTACATAGCGTCGATTTTCATGAAATAGAAGAGTGCCAGCGTCGCGGGGAATGGGATAAAACCGGGGACATTCTGGCTGAGGCGGCGCTTGGCTTACAGCGGGCGGGCGCAGAAGGTATTGTGCTATGTACCAATACGATGCATAAAGTGGCGGATGCCATTGAGTCACGTTGCACTCTGCCTTTCTTACACATTGCGGATGCCACCGGACGTGCAATTACCGGGGCCGGAATGACTCGTGTGGCGCTGCTGGGTACGCGTTACACCATGGAACAGGATTTTTATCGCGGGCGGCTGACGGAACAATTTTCCATCAATTGTCTTATTCCTGAAGCGGATGAACGGGCGAAAATTAATCAGATTATTTTTGAAGAACTGTGTCTGGGGCAATTTACCGAAGCGTCACGCGCTTATTGTGCGCAAGTGATTGCTCGCCTTGCAGAACAGGGCGCACAGGGCGTCATTTTTGGCTGCACAGAAATTGGTTTACTGGTGCCAGAAGAGCGCAGTGTTTTGCCTGTGTTTGATACCGCGGCGATCCATGCCGAGGATGCTGTCGCTTTTATGCTGTCGTAG", + "dna_sequence_length": 693, + "functions": [ + "Asp/Glu_racemase family protein" + ], + "id": "CDS_2800", + "location": [ + [ + "NC_000913", + 2980635, + "-", + 693 + ] + ], + "md5": "bb31d68eec8f4a6e4199d5f9db639de3", + "parent_gene": "", + "protein_md5": "50b6523e7b1ee39a47d6d54927c327dd", + "protein_translation": "MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLHSVDFHEIEECQRRGEWDKTGDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFLHIADATGRAITGAGMTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYCAQVIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAAIHAEDAVAFMLS", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG10056" + ], + [ + "gene_synonym", + "ECK2839" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE24" + ], + [ + "gene_synonym", + "NP_417318.1" + ], + [ + "gene_synonym", + "GI:16130745" + ], + [ + "gene_synonym", + "JW2809" + ], + [ + "gene_synonym", + "ASAP:ABE-0009319" + ], + [ + "gene_synonym", + "araE" + ], + [ + "gene_synonym", + "b2841" + ], + [ + "gene_synonym", + "GeneID:947341" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK2840" + ], + [ + "gene_synonym", + "GeneID:947323" + ], + [ + "gene_synonym", + "kduD" + ], + [ + "gene_synonym", + "GI:16130746" + ], + [ + "gene_synonym", + "EcoGene:EG12361" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37769" + ], + [ + "gene_synonym", + "NP_417319.1" + ], + [ + "gene_synonym", + "JW2810" + ], + [ + "gene_synonym", + "b2842" + ] + ], + "dna_sequence": 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+ ] + ], + "md5": "a34bb82c4945905949d6cacdfe61a47b", + "parent_gene": "", + "protein_md5": "c2394212a6c13b653747deb8690438ef", + "protein_translation": "MILSAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAEFGHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYVNGYTIAVDGGWLAR", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yqeE" + ], + [ + "gene_synonym", + "kduI" + ], + [ + "gene_synonym", + "NP_417320.1" + ], + [ + "gene_synonym", + "ECK2841" + ], + [ + "gene_synonym", + "ASAP:ABE-0009332" + ], + [ + "gene_synonym", + "GI:16130747" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46938" + ], + [ + "gene_synonym", + "GeneID:947319" + ], + [ + "gene_synonym", + "EcoGene:EG13096" + ], + [ + "gene_synonym", + "b2843" + ], + [ + "gene_synonym", + "JW2811" + ] + ], + "dna_sequence": "GTGGACGTAAGACAGAGCATCCACAGTGCGCACGCAAAAACGCTGGATACCCAAGGGCTGCGCAATGAATTTTTGGTTGAAAAGGTATTTGTCGCCGATGAGTACACCATGGTTTACAGCCACATTGACCGAATTATTGTTGGCGGCATTATGCCGATAACTAAAACGGTTTCCGTTGGCGGGGAAGTTGGTAAACAACTCGGCGTAAGCTATTTCCTTGAACGTCGCGAGTTAGGTGTTATCAATATTGGCGGTGCCGGTACGATTACTGTCGATGGCCAATGCTATGAAATCGGTCACCGCGACGCCCTGTATGTTGGTAAAGGTGCAAAAGAAGTTGTCTTTGCCAGTATTGATACCGGCACTCCGGCGAAGTTTTATTACAATTGCGCACCCGCGCATACGACGTATCCCACCAAAAAAGTCACACCGGACGAAGTATCTCCAGTCACGTTAGGCGATAACCTCACCAGTAACCGTCGCACGATTAACAAATATTTTGTCCCGGATGTACTGGAAACCTGCCAATTGAGTATGGGGCTGACGGAGCTGGCTCCGGGTAACTTGTGGAACACCATGCCGTGTCACACCCACGAGCGCCGGATGGAAGTTTATTTCTATTTCAATATGGATGATGACGCCTGCGTTTTCCACATGATGGGGCAGCCGCAAGAAACGCGTCATATTGTGATGCATAACGAGCAGGCGGTGATCTCCCCGAGCTGGTCGATCCATTCCGGTGTCGGAACCAAAGCTTATACCTTTATCTGGGGCATGGTCGGTGAAAACCAGGTCTTTGATGATATGGACCATGTGGCCGTTAAAGATTTGCGCTAG", + "dna_sequence_length": 837, + "functions": [ + "hexuronate isomerase" + ], + "id": "CDS_2803", + "location": [ + [ + "NC_000913", + 2984124, + "-", + 837 + ] 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"ATGAAAGACGTTGTGATTGTCGGGGCGTTACGGACACCTATCGGCTGCTTTCGTGGTGCGTTAGCGGGTCATTCCGCCGTGGAACTTGGTAGTCTGGTCGTGAAAGCGTTAATAGAACGTACCGGCGTTCCTGCATATGCGGTGGATGAAGTAATTCTTGGTCAGGTGTTGACTGCAGGGGCAGGGCAGAATCCGGCAAGGCAATCGGCTATTAAAGGTGGTCTGCCTAATAGCGTTTCTGCAATCACTATTAATGACGTTTGCGGTTCCGGGCTTAAAGCACTGCATCTGGCTACTCAGGCGATACAGTGTGGCGAGGCTGATATTGTCATCGCCGGTGGCCAGGAAAACATGAGCCGCGCACCACATGTTCTGACTGATAGCCGCACCGGTGCACAGCTTGGCAATAGCCAGTTGGTTGACAGTCTTGTGCATGATGGGTTGTGGGATGCCTTCAATGATTATCATATTGGTGTCACCGCCGAAAATCTGGCTCGCGAATATGGCATCAGCCGTCAGTTGCAGGATGCTTACGCACTTAGCTCGCAACAAAAAGCGCGAGCGGCGATTGACGCCGGACGATTTAAAGATGAGATCGTCCCGGTAATGACCCAAAGTAACGGGCAGACGTTGGTTGTTGATACCGATGAACAGCCACGCACTGACGCCAGCGCAGAAGGCTTAGCCCGTTTAAATCCTTCATTTGATAGTCTCGGTTCTGTGACAGCGGGTAATGCATCATCCATAAACGATGGCGCAGCTGCGGTAATGATGATGAGCGAAGCCAAAGCACGAGCGTTGAATTTACCCGTGCTGGCCCGCATTCGCGCATTTGCCAGCGTTGGTGTAGATCCGGCATTGATGGGAATTGCGCCGGTGTATGCGACCCGCCGTTGCCTGGAGCGTGTAGGCTGGCAGTTGGCTGAAGTCGATCTTATCGAGGCTAATGAAGCGTTTGCTGCACAGGCGCTTTCGGTTGGCAAGATGCTTGAGTGGGATGAGCGTCGGGTCAATGTCAATGGTGGCGCGATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGCGGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAG", 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"gene_synonym", + "NP_417323.2" + ], + [ + "gene_synonym", + "GeneID:945263" + ], + [ + "gene_synonym", + "GI:90111495" + ], + [ + "gene_synonym", + "ASAP:ABE-0009349" + ], + [ + "gene_synonym", + "b2846" + ], + [ + "gene_synonym", + "JW5454" + ] + ], + "dna_sequence": "ATGGGGCTTTGTAGTCGTTATAAAAGTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGATATATTTTTGTCGATTTTTCAGTAAGTTTTTTACGTCTATTCCTTGAAAAAGACTGGATTGACTATCTTGCAAGTACTGACATGGGGATTGTTTTAGTCAGCGACCGCAATATGCAATCGTTAGCTAATTACTGGCGAAAACACAACTCAGCAATATCTGCTGTCATATATAATGATGATGGTCTTGATGTTGCCAATGAAAAGATCAGACAACTATTTATTGGTCGTTATTTATCATTTACCGGAGGTAACACATTAACTCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCGAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGA", + "dna_sequence_length": 633, + "functions": [ + "putative LuxR family transcriptional regulator" + ], + "id": "CDS_2806", + "location": [ + [ + "NC_000913", + 2987536, + "+", + 633 + ] + ], + "md5": "9078ba1953b18167c5e69235a5128a9a", + "parent_gene": "", + "protein_md5": "d396e5a3ee8d4a3fda79e6efbf722c34", + "protein_translation": "MGLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEESSYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLFLEKDWIDYLASTDMGIVLVSDRNMQSLANYWRKHNSAISAVIYNDDGLDVANEKIRQLFIGRYLSFTGGNTLTQMEFTIMGYMVSGYNPYQIAEVLDMDIRSIYAYKQRIEKRMGGKINELFIRSHSVQH", + "protein_translation_length": 210, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK2845" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46942" + ], + [ + "gene_synonym", + "yqeI" + ], + [ + "gene_synonym", + "GeneID:947327" + ], + [ + "gene_synonym", + "ASAP:ABE-0009352" + ], + [ + "gene_synonym", + "EcoGene:EG13100" + ], + [ + "gene_synonym", + "GI:16130751" + ], + [ + "gene_synonym", + "NP_417324.1" + ], + [ + "gene_synonym", + "b2847" + ], + [ + "gene_synonym", + "JW2815" + ] + ], + "dna_sequence": "ATGTACTGGATTATTAACGATAATATCGAGTTCTGGCCTGAGCACCGAAAATTAATATCGGTACATAACGCCGATCTTAACGTCGTTCTGACAACGCCAGCCAGTCGATGTTTATCACTTCTACTTGAAGCTTTTCCTGATGTGGTTGCACAACAAGATTTTTTCACCAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAGACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAAGATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAAGACTGTTGCGGAAATTAATGGCTGCCATTTTAATGTAACAGAAGATACAATTGATGGGTTGAAAGAGTTCGATAAATATAAAACACGGATACTGGATTCGGGGATTAACTGTAAAAAACATCCGTGGTTATACTTCCCTCTTGCAAAATCCTCACCGGGGATGATTGTTATGGCATGCAATAAAAACTATAACCAACATGAAGTGGCAAACTGTTTAACCCTGTCTTACCGTGAGGTTAATCGTGATTGA", + "dna_sequence_length": 810, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_2807", + "location": [ + [ + "NC_000913", + 2988502, + "+", + 810 + ] + ], + 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"GTGATTGATTATAAAAAAAACTTATTATTTATTTTAGTTTTTATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACACTGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGTAATTTTTAATGACCAGGGACGAGCAAATCTTACCATCGACTTTATGTATAACAAAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGTAACAGAGAAAGTAAATCAATACGGCGAAATATTGAATACACATGGATTGAAAACTATGACACAGCCCATTTAACATCAAAGAAAGTTAATAAGTTTGAGATTATGGATCAAGTTGATGATGATAGACTTGCACAACTTATTCCTGATTTTTATGTCTTTCCAGAAAAAAGTGTAAGCTATAATATACTAAAGCAAGGTAAGCATGCTTTTATTTTGAGCATTGGTAACAGAGCAATAATGCATTGTGCAAGGTAA", + "dna_sequence_length": 483, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2808", + "location": [ + [ + "NC_000913", + 2989304, + "+", + 483 + ] + ], + "md5": "e47f6020f992acd879a219387fa3ed7e", + "parent_gene": "", + "protein_md5": "4e43668734e105de99887301275df018", + "protein_translation": "MIDYKKNLLFILVFISGFILFTVYSYTAEKMIYNETCTANWVIFNDQGRANLTIDFMYNKKNKTGTVALSGTWQQGNRESKSIRRNIEYTWIENYDTAHLTSKKVNKFEIMDQVDDDRLAQLIPDFYVFPEKSVSYNILKQGKHAFILSIGNRAIMHCAR", + "protein_translation_length": 160, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG14488" + ], + [ + "gene_synonym", + "YP_002791253.1" + ], + [ + "gene_synonym", + "yqeL" + ], + [ + "gene_synonym", + "GI:226524744" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P613" + ], + [ + "gene_synonym", + "ECK4498" + ], + [ + "gene_synonym", + "GeneID:7751637" + ], + [ + "gene_synonym", + "b4683" + ] + ], + "dna_sequence": "ATGAAAGATGTTGATCAAATCTTTGATGCTTTAGACTGCCATATACTGCGAGAATATTTAATTTTATTGTTTTATGATTAA", + "dna_sequence_length": 81, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2809", + "location": [ + [ + "NC_000913", + 2989899, + "-", + 81 + ] + ], + "md5": "dda1b68095d2611447029069a932746a", + "parent_gene": "", + "protein_md5": "fb4a01df4a2f6b52fa1306fda85f2882", + "protein_translation": "MKDVDQIFDALDCHILREYLILLFYD", + "protein_translation_length": 26, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK2847" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77136" + ], + [ + "gene_synonym", + "NP_417326.2" + ], + [ + "gene_synonym", + "GeneID:947329" + ], + [ + "gene_synonym", + "yqeK" + ], + [ + "gene_synonym", + "b2849" + ], + [ + "gene_synonym", + "ASAP:ABE-0009356" + ], + [ + "gene_synonym", + "GI:90111497" + ], + [ + "gene_synonym", + "JW2817" + ], + [ + "gene_synonym", + "EcoGene:EG13274" + ] + ], + "dna_sequence": "ATGGACATTGAATTTTCGCAGATTCATGAAATGGTCTATATGCATGATATTGTAAATTCGGACTCGAAAAAGAAACCAAGGATTCCGTTAAAAAAATTCCTTAATGCTGAGAATGTTCTCACGCAAACAACATCATGGACATTAAATTCAAGATATGTGAATGTTAATTCTGTCAATAAAGTCAACGTAAAGAGTAAAGTTAAAAACAGTTATATCTCACGATCTGTCAATGATGAGTTTAGTTTAACAGATGATGAAATCAATTCTTTTAAAGAAACGTTAGTCCTTTCCTCTATTGATTCACTGAGTAAACTGGTTCTTAATAATCCTCTTTCTGTATTGTTTACATCGACTGTACGAAGGAATAATAATCGAGCTAAGATGAATGTCGAGTTCGACTCATGGATTTGCACCAGATGTTGTTGA", + "dna_sequence_length": 426, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2810", + "location": [ + [ + "NC_000913", + 2990360, + "-", + 426 + ] + ], + "md5": 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"ATGAAGCCACGAAATATTAATAATAGCCTACCACTGCAACCATTAGTTCCTGATCAGGAGAACAAAAATAAGAAAAATGAAGAGAAATCCGTTAATCCAGTTAAAATCACAATGGGGTCTGGTTTAAATTATATTGAACAAGAATCTCTTGGAGGAAAATATCTAACACATGATTTGTCAATAAAGATAGCGGATATTTCTGAAGAGATAATTCAGCAAGCAATATTATCTGCTATGAGCATATATAAATTTTCGATAACAGATGATTTAATGAGTATGGCTGTAAATGAACTCATAAAACTGACCAAAATAGAGAATAATGTAGACCTGAATAAATTCACTACTATATGCACAGACGTTCTATCCCCCCGCGTCACCAGACATAATAAAGAAAAAAAAACAAACGACATTCTACCCTTCTCAAAAATCCCCTTTTTAATTTTCATTGAAAAAATGGCAATTGATACTATGAATCCAGGTCATACACATTAA", + "dna_sequence_length": 492, + "id": "CDS_2811", + "location": [ + [ + "NC_000913", + 2990554, + "+", + 396 + ], + [ + "NC_000913", + 2990948, + "+", + 96 + ] + ], + "md5": "597db7cf7e979991510a1414df170d29", + "parent_gene": "", + "protein_md5": "dba1fab0a2c0e8aa60c3b7307e4f4403", + "protein_translation": "MKPRNINNSLPLQPLVPDQENKNKKNEEKSVNPVKITMGSGLNYIEQESLGGKYLTHDLSIKIADISEEIIQQAILSAMSIYKFSITDDLMSMAVNELIKLTKIENNVDLNKFTTICTDVLSPRVTRHNKEKKTNDILPFSKIPFLIFIEKMAIDTMNPGHTH", + "protein_translation_length": 163, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ygeG" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46787" + ], + [ + "gene_synonym", + "EcoGene:EG13037" + ], + [ + "gene_synonym", + "GeneID:946986" + ], + [ + "gene_synonym", + "ECK2849" + ], + [ + "gene_synonym", + "GI:16130755" + ], + [ + "gene_synonym", + "ASAP:ABE-0009364" + ], + [ + "gene_synonym", + "JW2819" + ], + [ + "gene_synonym", + "NP_417328.1" + ], + [ + "gene_synonym", + "b2851" + ] + ], + "dna_sequence": "ATGAGCACAGAAACAATTGAAATATTCAATAATAGTGATGAATGGGCAAATCAACTAAAACACGCATTATCGAAAGGAGAAAATCTGGCATTACTACATGGTTTAACTCCTGATATCCTTGATAGAATATATGCATATGCATTCGACTACCATGAAAAGGGTAATATAACGGACGCAGAAATTTATTATAAATTCTTGTGCATTTATGCGTTCGAAAATCATGAGTATCTAAAAGATTTTGCATCAGTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCGATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAA", + "dna_sequence_length": 492, + "functions": [ + "SycD-like chaperone family TPR-repeat-containing protein" + ], + "id": "CDS_2812", + "location": [ + [ + "NC_000913", + 2991268, + "+", + 492 + ] + ], + "md5": "90678672da3447583759442e49167d65", + "parent_gene": "", + "protein_md5": "5444ce373fc6777ca03ce5bbf90ff67e", + "protein_translation": 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"ATGGACTTAGAAAATAAATTCTCATATCATTTTCTTGAGGGATTAACGCTCACGGAAGATGGAATTCTTACTCAAGGAAATGAGCAAGTTTATATTCCACAGAAAGAGTTAGGTGTATTAATAGTATTACTTGAATCCGCTGGTCATGTTGTACTGAAAGATATGATCATCGAATCAGTATGGAAAAATATTATTGTTAGTGACGAGTCCCTGACAAGATGTATCTATTCTTTGCGCTGCATTTTTGAAAAAATTGGCTATGATCGTTGCATAGAAACAATCTACCGGAAAGGTTATCGTTTCAGCGGGCAGGTTTTCAAAACTAAAATTAATGAAGATAATACTTCAGACTATTCCATAGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGAACTACATAATACATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGCACTTCATGGAAAAAGTGAACTTGAACTTGCTGCTCAAAAAGCATTAGAGCTTTTAGATTATGTATCAGACATAACCACTGTCGATGGAAAAATTTTAGCTATTATGGGACTGATAACTGGTCTGTCTGGACAAGCAAAAGTATCTCATATCTTATTTGAACAGGCTAAGATACACTCAACTGATATAGCCTCTCTCTACTACTATAGGGCACTAGTCCACTTTCATAATGAAAAAATTGAAGAGGCAAGGATTTGTATAGACAAATCACTACAACTCGAACCCAGAAGACGAAAAGCAGTTGTGATAAAAGAATGTGTAGATATGTATGTGCCTAACCCGCTCAAAAACAACATTAAACTCTACTATAAAGAAACTGAGAGTGAAAGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAA", 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"aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46790" + ], + [ + "gene_synonym", + "GeneID:947338" + ], + [ + "gene_synonym", + "EcoGene:EG13040" + ], + [ + "gene_synonym", + "ygeJ" + ], + [ + "gene_synonym", + "pbl" + ], + [ + "gene_synonym", + "b2854" + ], + [ + "gene_synonym", + "ECK2852" + ], + [ + "gene_synonym", + "JW5457" + ], + [ + "gene_synonym", + "ASAP:ABE-0009377" + ] + ], + "dna_sequence": "ATGCGCTCACCAAAAGTTAAATTCTTAACCATCTTCACGTTTTGTATATTTATTACAAAAATGTCTTTCGCCAGCAACTCTTGCTCTAATGAAGCAGGAACAATGTTCAGAATCGAACCAAATTTAATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAAATATATATTGTATATACCAGGCTTAATGAACTAGACAATCGTAAGGCTTCAGCAAAATGA", + "dna_sequence_length": 504, + "id": "CDS_2815", + "location": [ + [ + 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"gene_synonym", + "GI:16130763" + ], + [ + "gene_synonym", + "GeneID:947346" + ], + [ + "gene_synonym", + "ASAP:ABE-0009395" + ], + [ + "gene_synonym", + "ECK0358" + ], + [ + "gene_synonym", + "NP_417337.1" + ], + [ + "gene_synonym", + "insD1" + ], + [ + "gene_synonym", + "b2860" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:Q46800" + ], + [ + "gene_synonym", + "ygeT" + ], + [ + "gene_synonym", + "ASAP:ABE-0009416" + ], + [ + "gene_synonym", + "NP_417343.1" + ], + [ + "gene_synonym", + "b2867" + ], + [ + "gene_synonym", + "JW2835" + ], + [ + "gene_synonym", + "GeneID:947205" + ], + [ + "gene_synonym", + "ECK2863" + ] + ], + "dna_sequence": 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"CDS_2824", + "location": [ + [ + "NC_000913", + 3002614, + "+", + 879 + ] + ], + "md5": "e71ac59fd1ad7e0d0fc40d46236aa2b2", + "parent_gene": "", + "protein_md5": "6528f59616cd448ec93bb8144736b039", + "protein_translation": "MFDFASYHRAATLADAINLLADNPQAKLLAGGTDVLIQLHHHNDRYRHIVDIHNLAELRGITLAEDGSLRIGSATTFTQLIEDPITQRHLPALCAAATSIAGPQIRNVATYGGNICNGATSADSATPTLIYDAKLEIHSPRGVRFVPINGFHTGPGKVSLEHDEILVAFHFPPQPKEHAGSAHFKYAMRDAMDISTIGCAAHCRLDNGNFSELRLAFGVAAPTPIRCQHAEQTAQNAPLNLQTLEAISESVLQDVAPRSSWRASKEFRLHLIQTMTKKVISEAVAAAGGKLQ", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_417344.1" + ], + [ + "gene_synonym", + "xdhC" + ], + [ + "gene_synonym", + "EcoGene:EG13051" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46801" + ], + [ + "gene_synonym", + "GeneID:945148" + ], + [ + "gene_synonym", + "GI:16130770" + ], + [ + "gene_synonym", + "ASAP:ABE-0009418" + ], + [ + "gene_synonym", + "ygeU" + ], + [ + "gene_synonym", + "b2868" + ], + [ + "gene_synonym", + "ECK2864" + ], + [ + "gene_synonym", + "JW2836" + ] + ], + "dna_sequence": "ATGAATCACAGCGAAACAATTACCATCGAATGCACCATTAACGGGATGCCTTTTCAGCTTCACGCCGCACCAGGCACGCCGCTCTCGGAATTACTCCGCGAACAAGGACTGCTAAGTGTCAAACAAGGGTGCTGCGTGGGTGAATGTGGTGCCTGTACGGTGTTGGTCGACGGCACAGCAATAGACAGTTGCTTATACCTTGCCGCCTGGGCTGAAGGAAAAGAGATCCGCACGCTGGAAGGTGAAGCGAAAGGCGGAAAACTTTCTCATGTTCAGCAGGCTTATGCGAAATCCGGCGCAGTGCAGTGCGGGTTTTGTACGCCTGGCCTGATTATGGCTACCACGGCAATGCTGGCGAAACCACGCGAGAAGCCATTAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAA", + "dna_sequence_length": 480, + "functions": [ + "xanthine dehydrogenase, Fe-S binding subunit" + ], + "id": "CDS_2825", + "location": [ + [ + "NC_000913", + 3003489, + "+", + 480 + ] + ], + "md5": "508fd45e284a5ce8fbfffa9f19bc3269", + "parent_gene": "", + "protein_md5": "da56fd2cd0e2aaf487fb52906eeb8498", + "protein_translation": "MNHSETITIECTINGMPFQLHAAPGTPLSELLREQGLLSVKQGCCVGECGACTVLVDGTAIDSCLYLAAWAEGKEIRTLEGEAKGGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLDCEKTK", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG13052" + ], + [ + "gene_synonym", + "GeneID:947320" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46802" + ], + [ + "gene_synonym", + "NP_417345.1" + ], + [ + "gene_synonym", + "ygeV" + ], + [ + "gene_synonym", + "b2869" + ], + [ + "gene_synonym", + "ASAP:ABE-0009420" + ], + [ + "gene_synonym", + "ECK2865" + ], + [ + "gene_synonym", + "GI:16130771" + ], + [ + "gene_synonym", + "JW2837" + ] + ], + "dna_sequence": "ATGGAGCTTGCTACTACGCAGTCAGTATTGATGCAAATTCAACCGACAATTCAGCGTTTTGCCAGAATGCTTGCCAGCGTTTTGCAGCTTGAGGTTGAGATCGTTGATGAAAACTTGTGTCGCGTTGCCGGAACGGGCGCGTATGGGAAGTTTCTTGGTCGCCAGTTGAGCGGCAACTCACGCCTGCTCCGCCACGTCCTGGAAACGAAAACTGAAAAAGTTGTGACACAGTCTCGCTTCGATCCCCTTTGCGAAGGTTGCGATAGTAAAGAAAATTGCCGCGAAAAAGCATTTCTGGGTACGCCTGTCATTTTACAGGATCGTTGTGTTGGGGTGATAAGTTTGATTGCCGTTACCCACGAGCAACAAGAGCATATCAGTGATAATTTACGCGAATTTTCTGATTATGTTCGCCATATATCCACCATTTTTGTTTCGAAACTTCTGGAGGATCAGGGGCCAGGAGATAACATCAGTAAAATATTTGCGACCATGATCGATAATATGGATCAGGGCGTATTAGTTGTAGATGATGAAAATCGGGTTCAGTTTGTTAATCAGACTGCCTTAAAAACACTTGGTGTTGTGCAAAATAATATTATTGGGAAACCTATCCGTTTCAGACCATTAACATTTGAGAGTAATTTTACCCATGGACATATGCAGCATATTGTTTCATGGGACGATAAAAGTGAATTAATCATTGGTCAATTGCATAACATTCAGGGCCGACAATTATTTTTAATGGCGTTTCACCAATCGCATACCAGTTTTTCTGTAGCAAATGCACCTGATGAACCGCATATTGAACAATTGGTTGGCGAGTGCCGTGTTATGCGGCAATTAAAACGACTCATTAGCCGTATTGCACCCAGCCCATCCAGCGTTATGGTGGTTGGTGAAAGCGGCACGGGTAAAGAAGTCGTCGCCCGTGCAATCCATAAGTTGAGCGGAAGACGGAATAAACCCTTTATTGCTATCAACTGTGCCGCGATTCCGGAGCAGCTTCTGGAGAGCGAACTGTTCGGTTATGTTAAAGGTGCATTTACTGGCGCTTCTGCCAACGGTAAAACAGGGTTGATTCAGGCGGCGAATACGGGCACGCTGTTTCTCGATGAAATAGGTGATATGCCATTAATGTTGCAGGCTAAATTACTGCGCGCTATTGAGGCACGTGAAATTCTGCCGATTGGTGCCAGTAGCCCAATACAAGTCGACATTCGCATCATTTCTGCAACTAATCAGAATTTGGCCCAGTTCATTGCCGAAGGTAAATTCCGCGAAGATCTCTTCTACCGACTTAATGTTATCCCGATAACTCTGCCACCGCTGCGTGAACGTCAGGAAGATATTGAACTATTGGTGCATTACTTTTTACATCTGCATACCCGTCGTCTGGGATCGGTTTATCCTGGCATTGCTCCCGATGTCGTCGAAATATTGCGTAAGCATCGTTGGCCCGGAAACCTGCGCGAGTTAAGCAATTTGATGGAATATCTGGTTAACGTGGTTCCTTCAGGTGAAGTTATCGACAGCACGCTATTGCCGCCAAATCTGCTGAATAATGGCACAACGGAGCAAAGTGATGTAACAGAGGTCAGTGAGGCGCACCTGTCACTCGATGATGCGGGCGGCACGGCGCTGGAGGAGATGGAAAAGCAAATGATCCGCGAGGCGCTTTCACGTCATAACAGCAAGAAGCAAGTTGCTGATGAACTGGGCATCGGCATTGCTACGCTCTATCGCAAGATTAAGAAATATGAGTTGTTAAACACATAA", 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"GI:16130773" + ], + [ + "gene_synonym", + "JW2839" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P66899" + ], + [ + "gene_synonym", + "ECK2867" + ], + [ + "gene_synonym", + "NP_417347.1" + ], + [ + "gene_synonym", + "ygeX" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0009434" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P65807" + ], + [ + "gene_synonym", + "ECK2868" + ], + [ + "gene_synonym", + "NP_417348.1" + ], + [ + "gene_synonym", + "GeneID:947360" + ], + [ + "gene_synonym", + "ygeY" + ] + ], + "dna_sequence": 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"gene_synonym", + "UniProtKB/Swiss-Prot:Q46806" + ], + [ + "gene_synonym", + "ASAP:ABE-0009436" + ], + [ + "gene_synonym", + "GeneID:947359" + ], + [ + "gene_synonym", + "ECK2869" + ], + [ + "gene_synonym", + "NP_417349.4" + ], + [ + "gene_synonym", + "ygeZ" + ] + ], + "dna_sequence": 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"gene_synonym", + "yqeA" + ], + [ + "gene_synonym", + "NP_417350.1" + ], + [ + "gene_synonym", + "GI:16130776" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46807" + ], + [ + "gene_synonym", + "GeneID:947358" + ], + [ + "gene_synonym", + "ASAP:ABE-0009438" + ], + [ + "gene_synonym", + "ECK2870" + ] + ], + "dna_sequence": 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amino acid kinase" + ], + "id": "CDS_2831", + "location": [ + [ + "NC_000913", + 3011461, + "+", + 933 + ] + ], + "md5": "f49deed5e2f61338d35cc8dbf7e568ae", + "parent_gene": "", + "protein_md5": "1f71bd628b1094941a35fcc94fe24213", + "protein_translation": "MSKKIVLALGGNALGDDLAGQMKAVKITSQAIVDLIAQGHEVIVTHGNGPQVGMINQAFEAAAKTEAHSPMLPMSVCVALSQGYIGYDLQNALREELLSRGINKPVATLVTQVEVDANDPAFLNPTKPIGSFFTEQEAEQLTKQGYTLKEDAGRGYRRVVASPKPVDIIEKETVKALVDAGQVVITVGGGGIPVIREGNHLRGASAVIDKDWASARLAEMIDADMLIILTAVEKVAINFGKENEQWLDRLSLSDAERFIEEGHFAKGSMLPKVEAAASFARSRAGREALITVLSKAKEGIEGKTGTVICQ", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46808" + ], + [ + "gene_synonym", + "b2875" + ], + [ + "gene_synonym", + "JW2843" + ], + [ + "gene_synonym", + "yqeB" + ], + [ + "gene_synonym", + "GI:16130777" + ], + [ + "gene_synonym", + "EcoGene:EG13058" + ], + [ + "gene_synonym", + "ASAP:ABE-0009441" + ], + [ + "gene_synonym", + "NP_417351.1" + ], + 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"UniProtKB/Swiss-Prot:Q46809" + ], + [ + "gene_synonym", + "b2876" + ], + [ + "gene_synonym", + "yqeC" + ], + [ + "gene_synonym", + "GI:90111505" + ], + [ + "gene_synonym", + "GeneID:947350" + ], + [ + "gene_synonym", + "EcoGene:EG13059" + ], + [ + "gene_synonym", + "NP_417352.2" + ], + [ + "gene_synonym", + "JW5464" + ], + [ + "gene_synonym", + "ASAP:ABE-0009443" + ], + [ + "gene_synonym", + "ECK2872" + ] + ], + "dna_sequence": 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"MSAIDCIITAAGLSSRMGQWKMMLPWEQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGDHYSVEIENAEIILDIDTPDDFITAKERYTEI", + "protein_translation_length": 192, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_417354.1" + ], + [ + "gene_synonym", + "GI:16130780" + ], + [ + "gene_synonym", + "ygfK" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46811" + ], + [ + "gene_synonym", + "b2878" + ], + [ + "gene_synonym", + "EcoGene:EG13061" + ], + [ + "gene_synonym", + "JW5923" + ], + [ + "gene_synonym", + "GeneID:949068" + ], + [ + "gene_synonym", + "ECK2874" + ], + [ + "gene_synonym", + "ASAP:ABE-0009450" + ] + ], + "dna_sequence": 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"MGDIMRPIPFEELLTRIFDEYQQQRSIFGIPEQQFYSPVKGKTVSVFGETCATPVGPAAGPHTQLAQNIVTSWLTGGRFIELKTVQILDRLELEKPCIDAEDECFNTEWSTEFTLLKAWDEYLKAWFALHLLEAMFQPSDSGKSFIFNMSVGYNLEGIKQPPMQQFIDNMMDASDHPKFAQYRDTLNKLLQDDAFLARHGLQEKRESLQALPARIPTSMVHGVTLSTMHGCPPHEIEAICRYMLEEKGLNTFVKLNPTLLGYARVREILDVCGFGYIGLKEESFDHDLKLTQALEMLERLMALAKEKSLGFGVKLTNTLGTINNKGALPGEEMYMSGRALFPLSINVAAVLSRAFDGKLPISYSGGASQLTIRDIFDTGIRPITMATDLLKPGGYLRLSACMRELEGSDAWGLDHVDVERLNRLAADALTMEYTQKHWKPEERIEVAEDLPLTDCYVAPCVTACAIKQDIPEYIRLLGEHRYADALELIYQRNALPAITGHICDHQCQYNCTRLDYDSALNIRELKKVALEKGWDEYKQRWHKPAGSGSRHPVAVIGAGPAGLAAGYFLARAGHPVTLFEREANAGGVVKNIIPQFRIPAELIQHDIDFVAAHGVKFEYGCSPDLTIEQLKNQGFHYVLIATGTDKNSGVKLAGDNQNVWKSLPFLREYNKGTALKLGKHVVVVGAGNTAMDCARAALRVPGVEKATIVYRRSLQEMPAWREEYEEALHDGVEFRFLNNPERFDADGTLTLRVMSLGEPDEKGRRRPVETNETVTLLVDSLITAIGEQQDTEALNAMGVPLDKNGWPDVDHNGETRLTDVFMIGDVQRGPSSIVAAVGTARRATDAILSRENIRSHQNDKYWNNVNPAEIYQRKGDISITLVNSDDRDAFVAQEAARCLECNYVCSKCVDVCPNRANVSIAVPGFQNRFQTLHLDAYCNECGNCAQFCPWNGKPYKDKITVFSLAQDFDNSSNPGFLVEDCRVRVRLNNQSWVLNIDSKGQFNNVPPELNDMCRIISHVHQHHHYLLGRVEV", + "protein_translation_length": 1032, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_417355.4" + ], + [ + "gene_synonym", + "GI:90111506" + ], + [ + "gene_synonym", + "JW2847" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46812" + ], + [ + "gene_synonym", + "b2879" + ], + [ + "gene_synonym", + "ygfL" + ], + [ + "gene_synonym", + "EcoGene:EG13062" + ], + [ + "gene_synonym", + "GeneID:949072" + ], + [ + "gene_synonym", + "ssnA" + ], + [ + "gene_synonym", + "ECK2875" + ], + [ + "gene_synonym", + "ASAP:ABE-0009452" + ] + ], + "dna_sequence": 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+ "dna_sequence_length": 1329, + "functions": [ + "putative chlorohydrolase/aminohydrolase" + ], + "id": "CDS_2836", + "location": [ + [ + "NC_000913", + 3019161, + "+", + 1329 + ] + ], + "md5": "98345eae57a0c52ff1fc1d6157dea8e5", + "parent_gene": "", + "protein_md5": "26acda6262c33e006fdca9452f6991a5", + "protein_translation": "MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA", + "protein_translation_length": 442, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16130782" + ], + [ + "gene_synonym", + "b2880" + ], + [ + "gene_synonym", + "EcoGene:EG13063" + ], + [ + "gene_synonym", + "ygfM" + ], + [ + "gene_synonym", + "GeneID:949071" + ], + [ + "gene_synonym", + "NP_417356.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64557" + ], + [ + "gene_synonym", + "JW2848" + ], + [ + "gene_synonym", + "ECK2876" + ], + [ + "gene_synonym", + "ASAP:ABE-0009456" + ] + ], + "dna_sequence": "ATGATTGAACAATTTTTCAGGCCCGACTCTGTCGAACAGGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAATGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTACAGGATCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTTATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAATCGCCGCCCGCCAGGAAGAGTCGGTGCTGCTTCCCGTCCTGTTGGCACTGGATGCTGAACTGGTTTTTGGCAACGGCGAAACGCTGTCAATCGAGGACTACCTGGCCTGCCCATGCGATCGCCTGCTAACCGAAATTATCATTAAAGATCCGTATCGCACCTGTGCGACCCGCAAAATTAGCCGTTCTCAGGCAGGTTTAACCGTCGTGACGGCAGCCGTTGCAATGACAGACCACGACGGTATGCGAATTGCGCTGGATGGCGTCGCCAGTAAAGCACTGCGTCTGCATGATGTCGAAAAACAAAATCTGGAAGGCAATGCACTTGAACAGGCTGTCGCCAACGCCATTTTCCCGCAGGAAGATTTGCGGGGCAGCGTGGCCTATAAACGCTATATCACGGGAGTTCTGGTAGCCGACCTGTATGCCGACTGCCAACAGGCTGGGGAGGAAGCCGTATGA", + "dna_sequence_length": 780, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_2837", + "location": [ + [ + "NC_000913", + 3020540, + "+", + 780 + ] + ], + "md5": "756afcd10d0393c4de487bf5ae980ab4", + "parent_gene": "", + "protein_md5": "be97866f61c7dc08f7edcd699c4015ca", + "protein_translation": "MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWVDWDNGALRIGAMSRLQPLRDARFIPAALREALGFVYSRHVRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRTCATRKISRSQAGLTVVTAAVAMTDHDGMRIALDGVASKALRLHDVEKQNLEGNALEQAVANAIFPQEDLRGSVAYKRYITGVLVADLYADCQQAGEEAV", + "protein_translation_length": 259, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16130783" + ], + [ + "gene_synonym", + "xdhD" + ], + [ + "gene_synonym", + "b2881" + ], + [ + "gene_synonym", + "EcoGene:EG13064" + ], + [ + "gene_synonym", + "ygfN" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46814" + ], + [ + "gene_synonym", + "JW2849" + ], + [ + "gene_synonym", + "ASAP:ABE-0009459" + ], + [ + "gene_synonym", + "NP_417357.1" + ], + [ + "gene_synonym", + "ECK2877" + ], + [ + "gene_synonym", + "GeneID:949079" + ] + ], + "dna_sequence": "ATGATCATCCACTTTACTTTAAATGGCGCGCCTCAGGAGCTAACCGTTAATCCAGGCGAAAACGTGCAAAAGCTGTTGTTTAACATGGGAATGCACTCTGTACGCAACAGTGATGATGGTTTCGGGTTTGCCGGTTCTGACGCAATAATCTTTAACGGTAATATCGTTAACGCGTCCTTGCTTATTGCCGCACAGTTAGAGAAGGCAGATATTCGTACCGCAGAATCTCTGGGCAAATGGAACGAGTTAAGTCTGGTTCAACAGGCAATGGTTGATGTTGGCGTGGTGCAGTCTGGTTATAACGATCCAGCTGCAGCTCTGATTATCACCGATCTTCTCGATCGCATCGCCGCACCTACCCGCGAAGAGATCGACGACGCGCTTTCTGGTTTGTTCAGCCGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCGACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGAAGACCGCGTAACGGCTGACGCCTGCGTCATTAAAATGTTACGTAGCCCACACGCTCACGCACTGATTACTCATCTGGATGTCAGCAAAGCTGAAGCCTTACCGGGCGTCGTTCACGTTATTACTCACCTGAATTGCCCGGATATCTACTATACCCCGGGTGGTCAGAGCGCACCGGAACCGTCACCGCTTGACCGCCGTATGTTCGGCAAGAAAATGCGTCACGTCGGCGATCGTGTTGCTGCGGTCGTCGCAGAAAGTGAAGAAATTGCGCTCGAAGCACTGAAGCTCATCGACGTTGAATATGAAGTGCTTAAGCCGGTAATGTCGATCGACGAAGCAATGGCGGAAGATGCGCCTGTCGTGCACGATGAACCGGTGGTGTATGTTGCTGGTGCGCCAGATACTCTGGAAGACGATAACAGCCATGCAGCCCAGCGCGGCGAGCATATGATCATCAACTTCCCGATCGGTTCTCGCCCTCGCAAAAATATCGCCGCCAGTATTCATGGTCATATTGGCGATATGGACAAAGGCTTTGCCGATGCCGATGTGATCATTGAGCGAACCTATAACTCAACGCAAGCGCAGCAGTGCCCGACTGAAACACATATCTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGATTTCCGCGCCAACACTGGCCCTTACGGCAACCACTCACTCACCGTACCGTGTAACGGACCGGCGCTGTCGCTGCCGTTATATCCGTGCGATAACGTCGATTTCCAGGTCACCACCTACTACAGCAACATTTGCCCAAATGGTGCTTATCAGGGTTATGGCGCACCGAAAGGTAACTTCGCTATCACCATGGCATTAGCGGAACTGGCTGAACAGTTACAGATCGACCAACTGGAAATTATCGAACGTAACCGGGTACACGAAGGGCAAGAGCTGAAAATTCTCGGTGCAATCGGTGAAGGTAAAGCGCCGACCTCCGTTCCTTCCGCCGCCAGCTGTGCACTGGAAGAGATCCTGCGTCAGGGTCGCGAGATGATCCAATGGTCGTCACCGAAACCGCAAAATGGTGACTGGCACATCGGTCGCGGCGTCGCCATTATCATGCAGAAATCGGGTATCCCGGATATCGATCAGGCTAACTGCATGATCAAACTGGAATCGGACGGCACCTTTATCGTTCATTCTGGCGGTGCGGATATTGGTACTGGTCTGGATACTGTAGTGACGAAACTGGCAGCAGAAGTGCTGCACTGCCCACCGCAGGACGTGCATGTTATCTCCGGTGATACCGATCATGCGTTGTTTGATAAAGGCGCATATGCCTCGTCCGGTACTTGCTTCTCGGGTAACGCGGCGCGTTTGGCAGCGGAAAATCTACGGGAGAAAATTCTGTTCCACGGCGCGCAAATGTTGGGTGAGCCAGTGGCAGATGTTCAACTGGCAACGCCGGGCGTCGTGCGCGGCAAGAAAGGCGAAGTTAGTTTCGGGGATATTGCCCATAAAGGCGAAACCGGCACCGGCTTTGGTTCACTGGTGGGAACTGGCAGTTATATCACGCCTGATTTCGCCTTCCCGTATGGCGCAAACTTCGCTGAAGTTGCCGTCAACACGCGTACGGGTGAAATCCGCCTGGATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATGACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGATCTCGGAAATCGGTGTAAATGGCGCAGCTCCGGCGATTGCTACCGCAATTCACGATGCATGCGGCATCTGGTTACGCGAATGGCATTTCACACCGGAGAAAATACTCACTGCGCTGGAAAAAATATAA", 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"MIIHFTLNGAPQELTVNPGENVQKLLFNMGMHSVRNSDDGFGFAGSDAIIFNGNIVNASLLIAAQLEKADIRTAESLGKWNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAAPTREEIDDALSGLFSRDAGWQQYYQVIELAVARKNNPQATIDIAPTFRDDLEVIGKHYPKTDAAKMVQAKPCYVEDRVTADACVIKMLRSPHAHALITHLDVSKAEALPGVVHVITHLNCPDIYYTPGGQSAPEPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEYEVLKPVMSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGFADADVIIERTYNSTQAQQCPTETHICFTRMDGDRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQDILLEEVCAWATCVTGRPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLYPCDNVDFQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGKAPTSVPSAASCALEEILRQGREMIQWSSPKPQNGDWHIGRGVAIIMQKSGIPDIDQANCMIKLESDGTFIVHSGGADIGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEPVADVQLATPGVVRGKKGEVSFGDIAHKGETGTGFGSLVGTGSYITPDFAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGATLRAIGHSMSEEIIYDAEGHPLTRDLRSYGAPKIGDIPRDFRAVLVPSDDKVGPFGAKSISEIGVNGAAPAIATAIHDACGIWLREWHFTPEKILTALEKI", + "protein_translation_length": 956, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW2850" + ], + [ + "gene_synonym", + "GI:90111507" + ], + [ + "gene_synonym", + "ASAP:ABE-0009463" + ], + [ + "gene_synonym", + "GeneID:949075" + ], + [ + "gene_synonym", + "xanQ" + ], + [ + "gene_synonym", + "b2882" + ], + [ + "gene_synonym", + "ygfO" + ], + [ + "gene_synonym", + "ECK2878" + ], + [ + "gene_synonym", + "EcoGene:EG13065" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67444" + ], + [ + "gene_synonym", + "NP_417358.2" + ] + ], + "dna_sequence": "ATGTCTGATATAAACCATGCAGGTTCTGACCTTATATTTGAACTGGAGGATCGCCCTCCCTTTCATCAGGCTCTCGTTGGTGCCATTACCCATCTGTTGGCAATTTTCGTTCCGATGGTAACCCCCGCGTTAATCGTGGGTGCGGCCTTACAGCTTTCCGCTGAAACAACTGCCTATCTTGTTTCTATGGCGATGATCGCCTCTGGTATTGGTACCTGGTTACAAGTAAACCGCTACGGCATCGTCGGTTCTGGCCTACTCTCAATTCAGTCAGTCAATTTTTCATTTGTTACGGTCATGATTGCGCTGGGCAGCAGCATGAAAAGCGACGGTTTTCACGAAGAGTTAATCATGTCGTCGCTTCTCGGCGTCTCCTTCGTTGGCGCATTTCTGGTTGTCGGATCTTCATTTATCTTGCCCTATTTACGTCGGGTTATTACGCCTACCGTCAGCGGTATTGTGGTACTGATGATCGGCTTAAGCCTGATTAAAGTCGGCATTATCGATTTTGGTGGAGGATTTGCAGCCAAAAGCAGCGGTACGTTCGGCAATTACGAACATCTCGGCGTTGGTTTATTGGTTTTAATTGTGGTGATCGGCTTTAACTGCTGTCGCAGTCCGTTGCTACGCATGGGAGGGATCGCCATTGGGCTATGTGTCGGCTATATCGCATCGTTATGCCTGGGCATGGTGGATTTCAGCAGTATGCGCAATTTGCCGTTAATCACCATCCCGCATCCGTTCAAATACGGCTTTAGTTTTAGCTTCCATCAGTTCCTGGTGGTTGGCACGATTTATCTGCTTAGCGTGCTGGAAGCAGTCGGCGATATCACCGCCACGGCAATGGTTTCCCGCCGCCCCATTCAGGGGGAAGAGTATCAGTCCCGGCTGAAAGGCGGCGTGCTGGCAGATGGTCTGGTTTCTGTTATCGCCTCCGCTGTCGGTTCATTACCATTAACCACGTTTGCGCAAAATAATGGGGTTATTCAGATGACTGGCGTCGCTTCACGTTATGTCGGGCGAACCATCGCGGTAATGCTGGTTATCCTCGGCTTATTTCCGATGATTGGCGGCTTCTTCACGACCATTCCCTCGGCAGTTCTGGGAGGCGCAATGACGTTGATGTTTTCCATGATTGCCATCGCAGGGATTCGCATCATCATCACCAACGGTTTAAAGCGCCGTGAAACACTTATTGTCGCCACTTCTTTAGGTTTAGGGCTTGGCGTCTCCTACGATCCCGAAATTTTTAAAATATTGCCAGCCTCTATTTATGTATTAGTTGAAAACCCTATTTGTGCTGGCGGGTTAACTGCGATTTTATTAAATATTATCCTCCCTGGTGGCTACCGACAGGAAAACGTTCTGCCTGGTATTACCTCAGCGGAAGAGATGGATTAA", 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"gene_synonym", + "EcoGene:EG13066" + ], + [ + "gene_synonym", + "b2883" + ], + [ + "gene_synonym", + "GeneID:947366" + ], + [ + "gene_synonym", + "NP_417359.1" + ], + [ + "gene_synonym", + "ygfP" + ], + [ + "gene_synonym", + "JW5466" + ], + [ + "gene_synonym", + "ECK2879" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76641" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:Q46817" + ], + [ + "gene_synonym", + "ygfR" + ], + [ + "gene_synonym", + "GI:49176279" + ], + [ + "gene_synonym", + "ECK2880" + ], + [ + "gene_synonym", + "ygfQ" + ], + [ + "gene_synonym", + "JW5467" + ], + [ + "gene_synonym", + "GeneID:2847748" + ], + [ + "gene_synonym", + "ghxQ" + ], + [ + "gene_synonym", + "YP_026186.1" + ] + ], + "dna_sequence": 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"ASAP:ABE-0009471" + ], + [ + "gene_synonym", + "EcoGene:EG13069" + ], + [ + "gene_synonym", + "NP_417362.4" + ], + [ + "gene_synonym", + "GI:90111508" + ], + [ + "gene_synonym", + "b2886" + ], + [ + "gene_synonym", + "ygfS" + ], + [ + "gene_synonym", + "GeneID:949016" + ], + [ + "gene_synonym", + "ECK2881" + ], + [ + "gene_synonym", + "JW5468" + ] + ], + "dna_sequence": "ATGAAATCGTTAATTATCGTTAATCCGGCTGACTGTATTGGCTGCCGTACTTGTGAAGTAGCCTGTGTGGTCGCTCACCCTTCAGAACAGGAGTTGAATGCCGATGTCTTTTTACCCCGGCTGAAGGTACAGCGACTGGACAGCATCAGTGCGCCGGTGATGTGCCATCAGTGTGAAAACGCCCCTTGTGTTGGCGCTTGCCCCGTGGGGGCGCTGACGATGGGCGAGCAGGTGGTGCAGACCAATTCTGCCCGTTGTATTGGCTGTCAGAGTTGCGTCAGTGCGTGCCCGTTTGGAATGATCACCATTCAGTCGTTGCCGGGGGATACCCGACAACAAATTGTGAAATGCGATCTCTGTGAACAGCGGGAAGAGGGGCCAGCCTGCGTTGAATCTTGCCCAACACAGGCGCTGCAGTTGCTTACTGAAAGAGAACTCAGGCGAGTCCGCCAGCAGCGTATTGTTGCCAGCGGTGAGAATCCTCTCTGA", + "dna_sequence_length": 489, + "functions": [ + "putative 4Fe-4S ferredoxin-type oxidoreductase subunit" + ], + "id": "CDS_2842", + 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"protein_translation_length": 639, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b2888" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46821" + ], + [ + "gene_synonym", + "ECK2883" + ], + [ + "gene_synonym", + "ASAP:ABE-0009478" + ], + [ + "gene_synonym", + "GI:90111510" + ], + [ + "gene_synonym", + "EcoGene:EG13071" + ], + [ + "gene_synonym", + "JW5470" + ], + [ + "gene_synonym", + "GeneID:949017" + ], + [ + "gene_synonym", + "ygfU" + ], + [ + "gene_synonym", + "uacT" + ], + [ + "gene_synonym", + "NP_417364.2" + ] + ], + "dna_sequence": 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"type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009534" + ], + [ + "gene_synonym", + "NP_417380.1" + ], + [ + "gene_synonym", + "b2904" + ], + [ + "gene_synonym", + "JW2872" + ], + [ + "gene_synonym", + "gcvH" + ], + [ + "gene_synonym", + "EcoGene:EG10371" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6T9" + ], + [ + "gene_synonym", + "GI:16130806" + ], + [ + "gene_synonym", + "ECK2899" + ], + [ + "gene_synonym", + "GeneID:947393" + ] + ], + "dna_sequence": "ATGAGCAACGTACCAGCAGAACTGAAATACAGCAAAGAACACGAATGGCTGCGTAAAGAAGCCGACGGCACTTACACCGTTGGTATTACCGAACATGCTCAGGAGCTGTTAGGCGATATGGTGTTTGTTGACCTGCCGGAAGTGGGCGCAACGGTTAGCGCGGGCGATGACTGCGCGGTTGCCGAATCGGTAAAAGCGGCGTCAGACATTTATGCGCCAGTAAGCGGTGAAATCGTGGCGGTAAACGACGCACTGAGCGATTCCCCGGAACTGGTGAACAGCGAACCGTATGCAGGCGGCTGGATCTTTAAAATCAAAGCCAGCGATGAAAGCGAACTGGAATCACTGCTGGATGCGACCGCATACGAAGCATTGTTAGAAGACGAGTAA", + "dna_sequence_length": 390, + "functions": [ + "glycine cleavage complex lipoylprotein" + ], + "id": 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"b2906" + ], + [ + "gene_synonym", + "visC" + ], + [ + "gene_synonym", + "GeneID:947389" + ], + [ + "gene_synonym", + "GI:16130808" + ], + [ + "gene_synonym", + "EcoGene:EG11333" + ], + [ + "gene_synonym", + "ubiI" + ], + [ + "gene_synonym", + "NP_417382.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0009543" + ] + ], + "dna_sequence": 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+ ], + [ + "gene_synonym", + "acd" + ], + [ + "gene_synonym", + "JW2875" + ], + [ + "gene_synonym", + "b2907" + ], + [ + "gene_synonym", + "visB" + ], + [ + "gene_synonym", + "GeneID:947388" + ], + [ + "gene_synonym", + "GI:16130809" + ], + [ + "gene_synonym", + "ubiH" + ], + [ + "gene_synonym", + "ASAP:ABE-0009545" + ] + ], + "dna_sequence": 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"gene_synonym", + "scpK?" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27254" + ], + [ + "gene_synonym", + "GeneID:947412" + ], + [ + "gene_synonym", + "EcoGene:EG11445" + ], + [ + "gene_synonym", + "ASAP:ABE-0009579" + ], + [ + "gene_synonym", + "meaB" + ], + [ + "gene_synonym", + "NP_417393.1" + ], + [ + "gene_synonym", + "argK" + ] + ], + "dna_sequence": 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"GI:90111512" + ], + [ + "gene_synonym", + "ASAP:ABE-0009581" + ], + [ + "gene_synonym", + "mmcD" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52045" + ], + [ + "gene_synonym", + "scpB" + ], + [ + "gene_synonym", + "ECK2915" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW2900" + ], + [ + "gene_synonym", + "GI:16130834" + ], + [ + "gene_synonym", + "NP_417408.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0009621" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69826" + ], + [ + "gene_synonym", + "EcoGene:EG11792" + ] + ], + "dna_sequence": 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"b2934" + ], + [ + "gene_synonym", + "EcoGene:EG11791" + ], + [ + "gene_synonym", + "cmtB" + ], + [ + "gene_synonym", + "GI:16130835" + ], + [ + "gene_synonym", + "JW2901" + ], + [ + "gene_synonym", + "tolM" + ], + [ + "gene_synonym", + "ASAP:ABE-0009623" + ], + [ + "gene_synonym", + "NP_417409.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69824" + ] + ], + "dna_sequence": "ATGCGGCTTAGTGATTATTTTCCAGAATCATCAATCTCAGTTATACATTCAGCAAAAGATTGGCAGGAAGCTATCGATTTCTCGATGGTATCATTGCTGGATAAAAACTATATCAGCGAGAATTACATTCAGGCAATTAAAGATTCCACCATTAACAATGGCCCTTATTATATTCTCGCACCAGGCGTGGCAATGCCTCATGCGCGACCGGAATGTGGGGCGCTTAAAACCGGGATGTCTTTGACATTACTTGAACAAGGTGTTTATTTTCCGGGGAATGACGAACCAATTAAATTACTCATCGGACTCTCTGCTGCCGATGCCGATTCGCACATTGGCGCTATTCAGGCGTTAAGTGAATTACTGTGCGAAGAAGAAATACTCGAACAACTCTTAACAGCATCATCAGAAAAACAATTAGCGGACATTATCAGCCGCGGATAA", + "dna_sequence_length": 444, + "functions": [ + "putative mannitol-specific enzyme IIA component of PTS" + ], + "id": "CDS_2890", + "location": [ + [ + "NC_000913", + 3079330, + "-", + 444 + ] + ], + "md5": "413278807ff6fec5c08db355bddfd37a", + "parent_gene": "", + "protein_md5": "69bb77a7a3d14d6a6f90fb3064cadc4e", + "protein_translation": "MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQAIKDSTINNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGVYFPGNDEPIKLLIGLSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISRG", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b2935" + ], + [ + "gene_synonym", + "EcoGene:EG11427" + ], + [ + "gene_synonym", + "ECK2930" + ], + [ + "gene_synonym", + "GeneID:947420" + ], + [ + "gene_synonym", + "tkt" + ], + [ + "gene_synonym", + "YP_026188.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0009625" + ], + [ + "gene_synonym", + "tktA" + ], + [ + "gene_synonym", + "JW5478" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27302" + ], + [ + "gene_synonym", + "GI:49176286" + ] + ], + "dna_sequence": "ATGTCCTCACGTAAAGAGCTTGCCAATGCTATTCGTGCGCTGAGCATGGACGCAGTACAGAAAGCCAAATCCGGTCACCCGGGTGCCCCTATGGGTATGGCTGACATTGCCGAAGTCCTGTGGCGTGATTTCCTGAAACACAACCCGCAGAATCCGTCCTGGGCTGACCGTGACCGCTTCGTGCTGTCCAACGGCCACGGCTCCATGCTGATCTACAGCCTGCTGCACCTCACCGGTTACGATCTGCCGATGGAAGAACTGAAAAACTTCCGTCAGCTGCACTCTAAAACTCCGGGTCACCCGGAAGTGGGTTACACCGCTGGTGTGGAAACCACCACCGGTCCGCTGGGTCAGGGTATTGCCAACGCAGTCGGTATGGCGATTGCAGAAAAAACGCTGGCGGCGCAGTTTAACCGTCCGGGCCACGACATTGTCGACCACTACACCTACGCCTTCATGGGCGACGGCTGCATGATGGAAGGCATCTCCCACGAAGTTTGCTCTCTGGCGGGTACGCTGAAGCTGGGTAAACTGATTGCATTCTACGATGACAACGGTATTTCTATCGATGGTCACGTTGAAGGCTGGTTCACCGACGACACCGCAATGCGTTTCGAAGCTTACGGCTGGCACGTTATTCGCGACATCGACGGTCATGACGCGGCATCTATCAAACGCGCAGTAGAAGAAGCGCGCGCAGTGACTGACAAACCTTCCCTGCTGATGTGCAAAACCATCATCGGTTTCGGTTCCCCGAACAAAGCCGGTACCCACGACTCCCACGGTGCGCCGCTGGGCGACGCTGAAATTGCCCTGACCCGCGAACAACTGGGCTGGAAATATGCGCCGTTCGAAATCCCGTCTGAAATCTATGCTCAGTGGGATGCGAAAGAAGCAGGCCAGGCGAAAGAATCCGCATGGAACGAGAAATTCGCTGCTTACGCGAAAGCTTATCCGCAGGAAGCCGCTGAATTTACCCGCCGTATGAAAGGCGAAATGCCGTCTGACTTCGACGCTAAAGCGAAAGAGTTCATCGCTAAACTGCAGGCTAATCCGGCGAAAATCGCCAGCCGTAAAGCGTCTCAGAATGCTATCGAAGCGTTCGGTCCGCTGTTGCCGGAATTCCTCGGCGGTTCTGCTGACCTGGCGCCGTCTAACCTGACCCTGTGGTCTGGTTCTAAAGCAATCAACGAAGATGCTGCGGGTAACTACATCCACTACGGTGTTCGCGAGTTCGGTATGACCGCGATTGCTAACGGTATCTCCCTGCACGGTGGCTTCCTGCCGTACACCTCCACCTTCCTGATGTTCGTGGAATACGCACGTAACGCCGTACGTATGGCTGCGCTGATGAAACAGCGTCAGGTGATGGTTTACACCCACGACTCCATCGGTCTGGGCGAAGACGGCCCGACTCACCAGCCGGTTGAGCAGGTCGCTTCTCTGCGCGTAACCCCGAACATGTCTACATGGCGTCCGTGTGACCAGGTTGAATCCGCGGTCGCGTGGAAATACGGTGTTGAGCGTCAGGACGGCCCGACCGCACTGATCCTCTCCCGTCAGAACCTGGCGCAGCAGGAACGAACTGAAGAGCAACTGGCAAACATCGCGCGCGGTGGTTATGTGCTGAAAGACTGCGCCGGTCAGCCGGAACTGATTTTCATCGCTACCGGTTCAGAAGTTGAACTGGCTGTTGCTGCCTACGAAAAACTGACTGCCGAAGGCGTGAAAGCGCGCGTGGTGTCCATGCCGTCTACCGACGCATTTGACAAGCAGGATGCTGCTTACCGTGAATCCGTACTGCCGAAAGCGGTTACTGCACGCGTTGCTGTAGAAGCGGGTATTGCTGACTACTGGTACAAGTATGTTGGCCTGAACGGTGCTATCGTCGGTATGACCACCTTCGGTGAATCTGCTCCGGCAGAGCTGCTGTTTGAAGAGTTCGGCTTCACTGTTGATAACGTTGTTGCGAAAGCAAAAGAACTGCTGTAA", 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"MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMPSDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL", + "protein_translation_length": 663, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG11291" + ], + [ + "gene_synonym", + "b2936" + ], + [ + "gene_synonym", + "GI:90111514" + ], + [ + "gene_synonym", + "yggG" + ], + [ + "gene_synonym", + "ECK2931" + ], + [ + "gene_synonym", + "loiP" + ], + [ + "gene_synonym", + "ASAP:ABE-0009629" + ], + [ + "gene_synonym", + "NP_417411.2" + ], + [ + "gene_synonym", + "JW2903" + ], + [ + "gene_synonym", + "GeneID:945173" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25894" + ] + ], + "dna_sequence": "ATGAAAATTCGCGCCTTATTGGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTACAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCGAATACGCTAAACGTCTGACAACTATTGCCAATGCGCTAGGCAACAATATCAACGGTCAGCCGGTAAATTACAAAGTGTATATGGCGAAGGATGTGAACGCCTTTGCAATGGCTAACGGCTGTATCCGCGTCTATAGCGGGCTGATGGATATGATGACGGATAACGAAGTCGAAGCGGTGATCGGTCACGAAATGGGGCACGTGGCGTTAGGCCATGTGAAAAAAGGAATGCAGGTGGCACTTGGTACAAATGCCGTGCGAGTAGCTGCGGCCTCTGCGGGCGGGATTGTCGGAAGTTTATCTCAATCACAACTTGGTAATCTGGGCGAGAAATTAGTCAATTCGCAATTCTCCCAGCGCCAGGAAGCAGAAGCCGATGATTATTCTTACGATCTTCTGCGCCAACGCGGCATCAGCCCGGCAGGTCTTGCCACCAGCTTTGAAAAACTGGCAAAACTGGAAGAAGGTCGCCAAAGCTCAATGTTTGACGACCATCCTGCATCCGCCGAACGCGCCCAGCATATTCGCGATCGCATGAGCGCGGATGGGATTAAGTAA", + "dna_sequence_length": 759, + "functions": [ + "Phe-Phe periplasmic metalloprotease, OM lipoprotein", + "low salt-inducible", + "Era-binding heat shock protein" + ], + "id": "CDS_2892", + "location": [ + [ + "NC_000913", + 3081913, + "+", + 759 + ] + ], + "md5": "08f4e717e26f662f7134be0bb1c4f0fe", + "parent_gene": "", + "protein_md5": "5c9a05397a9e983ceb13bcff0c3df5f1", + "protein_translation": "MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQVKTLSDQACQEMDSKATIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAFAMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASAGGIVGSLSQSQLGNLGEKLVNSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSSMFDDHPASAERAQHIRDRMSADGIK", + "protein_translation_length": 252, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:947715" + ], + [ + "gene_synonym", + "EcoGene:EG10960" + ], + [ + "gene_synonym", + "b2937" + ], + [ + "gene_synonym", + "ECK2932" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60651" + ], + [ + "gene_synonym", + "JW2904" + ], + [ + "gene_synonym", + "NP_417412.1" + ], + [ + "gene_synonym", + "GI:16130838" + ], + [ + "gene_synonym", + "ASAP:ABE-0009632" + ], + [ + "gene_synonym", + "speB" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "JW2921" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52061" + ], + [ + "gene_synonym", + "rdgB" + ], + [ + "gene_synonym", + "NP_417429.1" + ], + [ + "gene_synonym", + "yggV" + ], + [ + "gene_synonym", + "b2954" + ] + ], + "dna_sequence": "ATGCAAAAAGTTGTCCTCGCAACCGGCAATGTCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCCACTCCGCTGGTATGCCACGGTAGCTGGCCGGGCGTGATTACTCGTGAACCAGCGGGCACTGGTGGCTTTGGTTATGATCCAATCTTCTTCGTACCTTCCGAAGGGAAAACCGCCGCCGAACTGACCCGCGAAGAAAAGAGCGCCATTTCCCACCGTGGTCAGGCGTTGAAACTGCTGCTGGACGCTTTACGTAATGGTTAA", + "dna_sequence_length": 594, + "functions": [ + "dITP/XTP pyrophosphatase" + ], + "id": "CDS_2909", + "location": [ + [ + 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"gene_synonym", + "yggX" + ], + [ + "gene_synonym", + "GI:16130863" + ], + [ + "gene_synonym", + "ECK2957" + ], + [ + "gene_synonym", + "b2962" + ], + [ + "gene_synonym", + "GeneID:947461" + ] + ], + "dna_sequence": "ATGAGCAGAACGATTTTTTGTACTTTCCTGCAACGTGAAGCAGAAGGTCAGGATTTTCAGCTGTACCCCGGCGAGCTGGGAAAACGCATCTATAACGAGATCTCCAAAGAAGCCTGGGCGCAGTGGCAGCACAAGCAAACCATGCTGATTAATGAAAAGAAACTCAACATGATGAATGCCGAGCACCGCAAGCTGCTTGAGCAGGAGATGGTCAACTTCCTGTTCGAGGGTAAAGAGGTGCATATCGAGGGCTATACGCCGGAAGATAAAAAATAA", + "dna_sequence_length": 276, + "functions": [ + "oxidative damage protective factor for iron-sulfur proteins" + ], + "id": "CDS_2917", + "location": [ + [ + "NC_000913", + 3104093, + "+", + 276 + ] + ], + "md5": "16ba63eff94035c54fb2879dfdba1f59", + "parent_gene": "", + "protein_md5": "d3e155df63b4b26d95a6a761b36e6453", + "protein_translation": "MSRTIFCTFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQHKQTMLINEKKLNMMNAEHRKLLEQEMVNFLFEGKEVHIEGYTPEDKK", + "protein_translation_length": 91, + "type": "CDS" + }, + { 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"gene_synonym", + "ECK2966" + ] + ], + "dna_sequence": "ATGTCGATAAAACAAATGCCAGGGAGGGTATTAATATCGCTATTGTTGAGCGTTACAGGATTATTAAGTGGCTGTGCCAGCCATAATGAAAATGCCAGTTTACTGGCGAAAAAACAGGCGCAAAATATCAGCCAAAACCTGCCGATTAAATCTGCGGGATATACCTTAGTGCTGGCGCAAAGTAGCGGCACAACGGTAAAAATGACCATTATCAGCGAAGCGGGTACACAAACCACGCAGACGCCTGACGCCTTTTTAACCAGCTATCAACGACAAATGTGCGCTGACCCGACGGTGAAATTAATGATCACTGAGGGAATTAATTACAGCATAACGATTAATGATACACGTACAGGTAACCAGTATCAGCGGAAACTGGATCGTACCACCTGTGGAATAGTCAAAGCATAA", + "dna_sequence_length": 411, + "functions": [ + "secretin (GspDbeta) OM localization lipoprotein pilotin" + ], + "id": "CDS_2925", + "location": [ + [ + "NC_000913", + 3113477, + "-", + 411 + ] + ], + "md5": "aceff67f9d81402a5e9814bfda4941ec", + "parent_gene": "", + "protein_md5": "784466b225deb9637506eebf4ec17ac6", + "protein_translation": "MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQSSGTTVKMTIISEAGTQTTQTPDAFLTSYQRQMCADPTVKLMITEGINYSITINDTRTGNQYQRKLDRTTCGIVKA", + "protein_translation_length": 136, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW2939" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46836" + ], + [ + "gene_synonym", + "ASAP:ABE-0009751" + ], + [ + "gene_synonym", + "yghH" + ], + [ + "gene_synonym", + "EcoGene:EG12992" + ], + [ + "gene_synonym", + "GI:90111523" + ], + [ + "gene_synonym", + "NP_417446.4" + ], + [ + "gene_synonym", + "pppA" + ], + [ + "gene_synonym", + "GeneID:947467" + ], + [ + "gene_synonym", + "ECK2967" + ], + [ + "gene_synonym", + "b2972" + ] + ], + "dna_sequence": 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"yghL" + ], + [ + "gene_synonym", + "b4468" + ], + [ + "gene_synonym", + "EcoGene:EG12996" + ], + [ + "gene_synonym", + "gox" + ], + [ + "gene_synonym", + "JW5487" + ], + [ + "gene_synonym", + "glcE" + ], + [ + "gene_synonym", + "YP_026191.1" + ], + [ + "gene_synonym", + "GI:49176295" + ], + [ + "gene_synonym", + "ASAP:ABE-0174098" + ] + ], + "dna_sequence": 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"ASAP:ABE-0009773" + ], + [ + "gene_synonym", + "EcoGene:EG12997" + ], + [ + "gene_synonym", + "NP_417453.1" + ], + [ + "gene_synonym", + "b2979" + ], + [ + "gene_synonym", + "gox" + ], + [ + "gene_synonym", + "glcD" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEP9" + ] + ], + "dna_sequence": 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"b2983" + ], + [ + "gene_synonym", + "GeneID:947716" + ], + [ + "gene_synonym", + "EcoGene:EG13001" + ], + [ + "gene_synonym", + "GI:49176296" + ], + [ + "gene_synonym", + "JW5490" + ] + ], + "dna_sequence": 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"gene_synonym", + "yghR" + ], + [ + "gene_synonym", + "b2984" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64572" + ], + [ + "gene_synonym", + "NP_417458.1" + ], + [ + "gene_synonym", + "EcoGene:EG13002" + ] + ], + "dna_sequence": "ATGGATGCACTACAAACTCAAACTGTTAATAGTACAACCGCGCCGCAGCCCAACTACATTCCGGGGCTGATTGCGGTGGTCGGGTGTGATGGCACCGGTAAATCCACACTGACCACCGACCTGGTGAAATCGCTGCAACAACACTGGCAAACCGAGCGGCGCTATCTGGGGCTGCTCTCCGGCGAAGACGGCGACAAAATCAAACGATTGCCGTTGGTTGGCGTCTGGCTGGAACGGCGACTGGCGGCCAAATCCTCGAAAACCCAAAGCATGAAAACCAAATCTCCGGCGCTATGGGCGGCGGTGATTATGTACTGCTTCTCGCTGCGAAGAATGGCGAATCTACGCAAGGTTCAGCGACTGGCGCAAAGTGGCGTTCTGGTGGTCAGCGATCGCTTCCCGCAGGCTGAAATTTCGGGCTTTTATTATGATGGACCGGGGATTGGCGTCGAACGTGCGACCGGGAAAATCAGCATGTTTCTGGCGCAGCGCGAACGGCGTTTATACCAACAAATGGCGCAATATCGCCCGGAATTAATTATTCGCCTGGGCATTGATATTGAGACTGCCATCTCCCGCAAGCCTGACCATGACTATGCCGAGCTGCAGGACAAAATCGGTGTCATGTCGAAGATTGGCTATAACGGCACAAAAATTCTTGAGATTGATTCCAGAGCGCCCTACAGCGAAGTGCTGGAACAGGCACAGAAGGCGGTTTCTCTGGTTGCCATCGTTTCTGACCGCCGAAGTTTAACTTAA", 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"gss" + ], + [ + "gene_synonym", + "ECK2982" + ], + [ + "gene_synonym", + "ASAP:ABE-0009804" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AES0" + ], + [ + "gene_synonym", + "GeneID:947474" + ], + [ + "gene_synonym", + "NP_417462.1" + ], + [ + "gene_synonym", + "JW2956" + ], + [ + "gene_synonym", + "b2988" + ], + [ + "gene_synonym", + "GI:16130888" + ] + ], + "dna_sequence": 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"protein_translation_length": 619, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46845" + ], + [ + "gene_synonym", + "ECK2983" + ], + [ + "gene_synonym", + "GI:90111524" + ], + [ + "gene_synonym", + "NP_417463.4" + ], + [ + "gene_synonym", + "ASAP:ABE-0009812" + ], + [ + "gene_synonym", + "yghU" + ], + [ + "gene_synonym", + "EcoGene:EG13005" + ], + [ + "gene_synonym", + "b2989" + ], + [ + "gene_synonym", + "GeneID:947472" + ], + [ + "gene_synonym", + "JW5492" + ] + ], + "dna_sequence": 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"NC_000913", + 3138727, + "+", + 867 + ] + ], + "md5": "87225b72cb1b9c2fb8e2c588589f10ba", + "parent_gene": "", + "protein_md5": "676d35389c27f40daf8cdec20faf357b", + "protein_translation": "MTDNTYQPAKVWTWDKSAGGAFANINRPVSGPTHEKTLPVGKHPLQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIPALRDHTHNPPIRVFESGSILLYLAEKFGYFLPQDLAKRTETMNWLFWLQGAAPFLGGGFGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGNVVLGGVYDAAEFLDAGSYKHVQRWAKEVGERPAVKRGRIVNRTNGPLNEQLHERHDASDFETNTEDKRQG", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "hybG" + ], + [ + "gene_synonym", + "NP_417464.1" + ], + [ + "gene_synonym", + "GeneID:948020" + ], + [ + "gene_synonym", + "JW2958" + ], + [ + "gene_synonym", + "ASAP:ABE-0009816" + ], + [ + "gene_synonym", + "b2990" + ], + [ + "gene_synonym", + "ECK2984" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAM7" + ], + [ + "gene_synonym", + "GI:16130890" + ], + [ + "gene_synonym", + "EcoGene:EG11805" + ] + ], + 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"UniProtKB/Swiss-Prot:P0A703" + ], + [ + "gene_synonym", + "GI:16130891" + ], + [ + "gene_synonym", + "GeneID:948004" + ], + [ + "gene_synonym", + "JW5493" + ], + [ + "gene_synonym", + "EcoGene:EG11804" + ] + ], + "dna_sequence": "ATGCATGAGTTGTCTCTTTGCCAGAGCGCCGTTGAAATTATCCAACGGCAGGCGGAGCAGCACGATGTTAAGCGCGTCACCGCCGTGTGGCTGGAAATTGGCGCGCTCTCCTGCGTTGAGGAGAGCGCCGTCCGTTTTAGTTTTGAAATTGTCTGCCACGGAACGGTGGCGCAAGGGTGCGATTTACATATCGTCTATAAACCCGCCCAGGCTTGGTGCTGGGATTGCAGCCAGGTGGTGGAGATTCATCAGCACGATGCGCAGTGTCCGCTCTGTCACGGCGAGCGGTTGCGTGTCGATACCGGCGATTCGCTGATCGTCAAAAGTATTGAAGTTGAATAA", + "dna_sequence_length": 342, + "functions": [ + "protein involved with the maturation of hydrogenases 1 and 2" + ], + "id": "CDS_2945", + "location": [ + [ + "NC_000913", + 3140318, + "-", + 342 + ] + ], + "md5": "eb2a3c2a9500e21933a3fa6db8cea8f0", + "parent_gene": "", + "protein_md5": "488b64d8d7d1d62b8dc4c69da2641139", + "protein_translation": "MHELSLCQSAVEIIQRQAEQHDVKRVTAVWLEIGALSCVEESAVRFSFEIVCHGTVAQGCDLHIVYKPAQAWCWDCSQVVEIHQHDAQCPLCHGERLRVDTGDSLIVKSIEVE", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "hybE" + ], + [ + "gene_synonym", + "JW2960" + ], + [ + "gene_synonym", + "ASAP:ABE-0009824" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAN1" + ], + [ + "gene_synonym", + "ECK2986" + ], + [ + "gene_synonym", + "NP_417466.1" + ], + [ + "gene_synonym", + "GI:16130892" + ], + [ + "gene_synonym", + "GeneID:947483" + ], + [ + "gene_synonym", + "EcoGene:EG11803" + ], + [ + "gene_synonym", + "b2992" + ] + ], + "dna_sequence": "ATGACTGAAGAGATAGCAGGTTTCCAGACCTCCCCGAAGGCGCAAGTACAGGCAGCGTTTGAAGAAATTGCCCGGCGTTCGATGCACGATCTCTCTTTTCTGCATCCTTCAATGCCGGTGTATGTTTCTGATTTTACGCTGTTCGAAGGTCAGTGGACGGGGTGTGTGATCACCCCGTGGATGCTGAGTGCAGTTATCTTCCCCGGCCCGGATCAACTCTGGCCGCTGCGCAAAGTGAGTGAAAAAATTGGTCTGCAACTGCCGTATGGCACTATGACCTTTACCGTTGGCGAACTGGACGGTGTTTCGCAATATCTCTCCTGTTCGCTGATGTCGCCGCTTTCGCACAGCATGTCGATTGAAGAGGGCCAACGCCTGACGGATGACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCTGCTGTTTGGTCGCAGGAGTGGCGAAAATGCATGA", + "dna_sequence_length": 489, + "functions": [ + "hydrogenase 2-specific chaperone" + ], + "id": "CDS_2946", + "location": [ + [ + "NC_000913", + 3140799, + "-", + 489 + ] + ], + "md5": "ac28a7fc857b48c0ec910396d13db728", + "parent_gene": "", + "protein_md5": "d3def59d2540f906d8b31bd384435782", + "protein_translation": "MTEEIAGFQTSPKAQVQAAFEEIARRSMHDLSFLHPSMPVYVSDFTLFEGQWTGCVITPWMLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGVSQYLSCSLMSPLSHSMSIEEGQRLTDDCARMILSLPVTNPDVPHAGRRALLFGRRSGENA", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37182" + ], + [ + "gene_synonym", + "hybD" + ], + [ + "gene_synonym", + "JW2961" + ], + [ + "gene_synonym", + "GeneID:948982" + ], + [ + "gene_synonym", + "ECK2987" + ], + [ + "gene_synonym", + "NP_417467.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0009826" + ], + [ + "gene_synonym", + "GI:16130893" + ], + [ + "gene_synonym", + "EcoGene:EG11802" + ], + [ + "gene_synonym", + "b2993" + ] + ], + "dna_sequence": 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"protein_translation_length": 164, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK2988" + ], + [ + "gene_synonym", + "JW2962" + ], + [ + "gene_synonym", + "EcoGene:EG11801" + ], + [ + "gene_synonym", + "GI:16130894" + ], + [ + "gene_synonym", + "b2994" + ], + [ + "gene_synonym", + "GeneID:945182" + ], + [ + "gene_synonym", + "hybC" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACE0" + ], + [ + "gene_synonym", + "ASAP:ABE-0009828" + ], + [ + "gene_synonym", + "NP_417468.1" + ] + ], + "dna_sequence": "ATGAGCCAGAGAATTACTATTGATCCGGTAACCCGTATTGAGGGGCATTTACGCATCGATTGCGAAATCGAAAATGGCGTCGTTTCGAAAGCATGGGCTTCCGGTACCATGTGGCGCGGCATGGAAGAGATCGTGAAAAACCGCGATCCGCGCGATGCATGGATGATTGTGCAACGTATCTGTGGCGTATGTACTACCACTCACGCGCTGTCTTCCGTTCGTGCGGCAGAAAGTGCGCTGAATATCGACGTTCCGGTTAACGCGCAATACATCCGTAACATCATTCTGGCTGCGCACACCACGCATGACCATATTGTTCATTTCTATCAGCTTTCGGCGCTGGACTGGGTGGACATCACTTCTGCACTGCAAGCTGACCCAACCAAAGCCTCCGAAATGCTGAAAGGCGTTTCGACCTGGCACCTGAACAGTCCGGAAGAGTTCACCAAAGTTCAGAACAAGATCAAAGATCTGGTTGCCAGCGGTCAGTTGGGTATTTTCGCTAATGGCTACTGGGGTCATCCGGCGATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGAGCAGGTTTATAAGGTTGATACCGCAGTTATTGCCGCGTTCTACCCGGAATGGCTGACACGCGGTAAAGGTGCGGTGAACTACCTGAGCGTGCCGGAATTCCCGACCGACAGTAAAAACGGCAGCTTCCTGTTCCCGGGCGGCTACATTGAGAATGCGGATCTGTCCTCGTATCGTCCGATCACTTCTCATTCCGATGAATACCTGATCAAAGGCATTCAGGAAAGCGCGAAGCACTCCTGGTATAAAGACGAAGCGCCGCAGGCACCGTGGGAAGGCACCACCATTCCGGCTTATGATGGTTGGTCTGACGACGGGAAATATTCCTGGGTGAAATCACCGACTTTCTACGGCAAAACGGTAGAAGTGGGGCCACTGGCTAATATGCTGGTGAAACTGGCGGCAGGTCGCGAATCTACCCAGAACAAACTGAATGAAATCGTTGCGATTTATCAGAAACTGACTGGCAACACGCTGGAAGTGGCACAGCTGCACTCCACGCTGGGCCGTATTATTGGTCGTACCGTTCACTGCTGTGAATTGCAGGATATCCTGCAAAACCAATACAGTGCACTGATCACCAATATCGGCAAAGGCGATCACACCACCTTTGTGAAGCCGAACATTCCGGCAACGGGTGAATTCAAAGGTGTTGGCTTCCTCGAAGCGCCGCGCGGTATGCTCTCTCACTGGATGGTTATTAAAGACGGTATCATCAGCAACTACCAGGCGGTTGTTCCATCAACCTGGAACTCTGGTCCGCGTAACTTCAATGATGACGTCGGTCCTTACGAGCAGTCGCTGGTGGGTACACCGGTTGCCGATCCGAATAAACCGCTGGAAGTGGTGCGTACCATTCACTCCTTTGACCCGTGCATGGCCTGTGCGGTACACGTAGTGGATGCTGACGGCAACGAAGTGGTTTCAGTGAAGGTTCTGTAA", 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"UniProtKB/Swiss-Prot:P37180" + ], + [ + "gene_synonym", + "ECK2989" + ], + [ + "gene_synonym", + "EcoGene:EG11800" + ], + [ + "gene_synonym", + "b2995" + ], + [ + "gene_synonym", + "hybB" + ], + [ + "gene_synonym", + "GeneID:948615" + ], + [ + "gene_synonym", + "NP_417469.1" + ], + [ + "gene_synonym", + "GI:16130895" + ], + [ + "gene_synonym", + "ASAP:ABE-0009830" + ], + [ + "gene_synonym", + "JW5494" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P67244" + ], + [ + "gene_synonym", + "ECK2996" + ], + [ + "gene_synonym", + "NP_417475.1" + ], + [ + "gene_synonym", + "yqhA" + ], + [ + "gene_synonym", + "EcoGene:EG13011" + ] + ], + "dna_sequence": "ATGGAACGTTTTCTTGAAAATGCAATGTATGCTTCTCGCTGGCTGCTTGCCCCCGTGTACTTTGGCCTTTCGCTGGCGTTAGTTGCCCTGGCGCTGAAGTTCTTCCAGGAGATTATTCACGTACTGCCGAATATCTTCTCGATGGCGGAATCAGATTTGATCCTCGTGTTGCTGTCGCTGGTGGATATGACGCTGGTTGGCGGTTTGCTGGTGATGGTGATGTTTTCCGGTTATGAGAATTTCGTCTCACAGCTGGATATCTCCGAGAACAAAGAGAAGCTGAACTGGCTGGGGAAAATGGACGCAACGTCGCTGAAAAACAAAGTAGCAGCGTCGATTGTGGCAATTTCTTCCATTCACTTACTGCGCGTCTTTATGGATGCGAAAAATGTCCCGGATAACAAACTGATGTGGTACGTCATTATCCATCTGACGTTTGTGCTTTCTGCATTTGTGATGGGCTATCTTGACCGACTGACTCGTCATAATCACTGA", + "dna_sequence_length": 495, + "functions": [ + "UPF0114 family putative inner membrane protein" + ], + "id": "CDS_2955", + "location": [ + [ + "NC_000913", + 3149471, + "-", + 495 + ] + ], + "md5": "c077a8088eca9a0d41643724a623385d", + "parent_gene": "", + "protein_md5": 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"gene_synonym", + "ASAP:ABE-0009888" + ], + [ + "gene_synonym", + "ECK3003" + ], + [ + "gene_synonym", + "GeneID:947493" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:90111527" + ], + [ + "gene_synonym", + "GeneID:947495" + ], + [ + "gene_synonym", + "yqhE" + ], + [ + "gene_synonym", + "JW5499" + ], + [ + "gene_synonym", + "dkgA" + ], + [ + "gene_synonym", + "ECK3004" + ], + [ + "gene_synonym", + "EcoGene:EG13015" + ] + ], + "dna_sequence": 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"DUF3828 family putative periplasmic protein" + ], + "id": "CDS_2964", + "location": [ + [ + "NC_000913", + 3157650, + "+", + 927 + ] + ], + "md5": "bfbedb6e8549f495010f9994dba893f4", + "parent_gene": "", + "protein_md5": "a7b3522afc4276875720fab056a8b64b", + "protein_translation": "MKIILLFLAALASFTVHAQPPSQTVEQTVRHIYQNYKSDATAPYFGETGERAITSARIQQALTLNDNLTLPGNIGWLDYDPVCDCQDFGDLVLESVAITQTDADHADAVVRFRIFKDDKEKTTQTLKMVAENGRWVIDDIVSNHGSVLQAVNSENEKTLAALASLQKEQPEAFVAELFEHIADYSWPWTWVVSDSYRQAVNAFYKTTFKTANNPDEDMQIERQFIYDNPICFGEESLFSRVDEIRVLEKTADSARIHVRFTLTNGNNEEQELVLQRREGKWEIADFIRPNSGSLLKQIEAKTAARLKQ", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b3014" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P65298" + ], + [ + "gene_synonym", + "ASAP:ABE-0009898" + ], + [ + "gene_synonym", + "EcoGene:EG13018" + ], + [ + "gene_synonym", + "JW2982" + ], + [ + "gene_synonym", + "NP_417487.1" + ], + [ + "gene_synonym", + "GI:16130912" + ], + [ + "gene_synonym", + "ECK3006" + ], + [ + "gene_synonym", + "yqhH" + ], + [ + "gene_synonym", + "GeneID:946832" + ] + ], + "dna_sequence": "ATGAAAACGATTTTCACCGTGGGAGCTGTTGTTCTGGCAACCTGCTTGCTCAGTGGCTGCGTCAATGAGCAAAAGGTCAATCAGCTGGCGAGCAATGTGCAAACATTAAATGCCAAAATCGCCCGGCTTGAGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGA", + "dna_sequence_length": 258, + "functions": [ + "outer membrane lipoprotein, Lpp paralog" + ], + "id": "CDS_2965", + "location": [ + [ + "NC_000913", + 3158627, + "+", + 258 + ] + ], + "md5": "429a63b3b6a3bad3b0645062384ba0b7", + "parent_gene": "", + "protein_md5": "6785684b497f6352952536f341ce094f", + "protein_translation": "MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCLRMYAE", + "protein_translation_length": 85, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "YP_026196.1" + ], + [ + "gene_synonym", + "GI:49176302" + ], + [ + "gene_synonym", + "b4469" + ], + [ + "gene_synonym", + "JW5501" + ], + [ + "gene_synonym", + "ygiR" + ], + [ + "gene_synonym", + "ygiQ" + ], + [ + "gene_synonym", + "EcoGene:EG13019" + ], + [ + "gene_synonym", + "ECK3007" + ], + [ + "gene_synonym", + "GeneID:948963" + ], + [ + "gene_synonym", + "ASAP:ABE-0174099" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46861" + ] + ], + "dna_sequence": 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"MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR", + "protein_translation_length": 739, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ygiJ" + ], + [ + "gene_synonym", + "ASAP:ABE-0009905" + ], + [ + "gene_synonym", + "b3017" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26648" + ], 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"ATGTCACTCAGTCGGCGTCAGTTCATTCAGGCATCGGGGATTGCACTTTGTGCAGGCGCTGTTCCCCTGAAGGCCAGCGCAGCCGGGCAACAGCAACCGCTACCCGTTCCGCCGCTACTTGAATCTCGCCGTGGGCAACCGCTGTTTATGACTGTACAACGTGCGCACTGGTCATTTACGCCAGGGACACGCGCGTCGGTCTGGGGAATCAATGGTCGTTACCTGGGGCCGACTATCCGCGTCTGGAAGGGCGACGATGTTAAGCTTATTTACAGCAACCGCCTGACAGAAAATGTCTCAATGACGGTGGCCGGGCTACAGGTACCAGGCCCGCTGATGGGCGGTCCGGCACGGATGATGTCGCCAAACGCTGACTGGGCACCCGTACTGCCCATTCGCCAGAACGCAGCTACTCTGTGGTATCACGCCAATACTCCCAACCGCACGGCTCAGCAGGTCTATAACGGCCTTGCCGGAATGTGGCTGGTGGAAGATGAAGTCAGCAAGTCGCTGCCTATCCCCAACCATTATGGTGTGGATGATTTTCCGGTCATTATCCAGGATAAACGGCTGGATAACTTTGGTACGCCAGAATACAACGAACCGGGAAGCGGCGGCTTTGTTGGTGATACGCTGCTGGTTAACGGTGTACAAAGCCCGTACGTTGAAGTCTCGCGTGGCTGGGTGCGCTTGCGACTGCTGAACGCGTCGAACTCTCGTCGCTATCAACTACAGATGAACGATGGTCGCCCGTTACATGTGATTTCTGGCGATCAGGGATTCCTGCCTGCTCCTGTATCGGTGAAGCAACTTTCGCTGGCACCGGGCGAGCGCCGCGAGATTCTGGTGGATATGAGCAACGGCGATGAAGTGTCGATCACCTGTGGCGAAGCGGCGAGCATTGTTGATCGTATTCGTGGCTTCTTTGAGCCATCCAGTATTCTGGTTTCTACCCTGGTGCTAACGCTGCGCCCAACCGGCCTTCTGCCGCTGGTCACAGACAGTCTTCCGATGCGCTTGCTGCCAACTGAAATCATGGCTGGTTCGCCAATTCGCAGTCGCGATATCAGTCTGGGTGATGACCCGGGTATTAATGGACAGCTGTGGGACGTCAACCGTATTGATGTCACCGCGCAGCAAGGAACGTGGGAACGCTGGACGGTACGCGCGGACGAGCCGCAAGCGTTCCATATTGAAGGCGTAATGTTCCAGATCCGTAACGTGAATGGCGCGATGCCGTTCCCGGAAGACAGAGGCTGGAAAGATACCGTTTGGGTTGACGGACAAGTGGAGCTGCTTGTTTATTTCGGTCAGCCTTCCTGGGCGCACTTCCCGTTCTACTTCAACAGTCAGACGCTGGAAATGGCGGACCGTGGCTCGATTGGGCAACTGTTGGTCAATCCGGTACCGTAA", + "dna_sequence_length": 1413, + "functions": [ + "septal ring component that protects the divisome from stress", + "multicopy suppressor of ftsI(Ts)" + ], + "id": "CDS_2967", + "location": [ + [ + "NC_000913", + 3162669, + "-", + 1413 + ] + ], + "md5": "9303087a1e571b8b053119eb930530a2", + "parent_gene": "", + "protein_md5": "b1cbeba5d0a5c242fd072b71b7f6541a", + "protein_translation": "MSLSRRQFIQASGIALCAGAVPLKASAAGQQQPLPVPPLLESRRGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGPLMGGPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQSPYVEVSRGWVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEIMAGSPIRSRDISLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRADEPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWVDGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP", + "protein_translation_length": 470, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "parF" + ], + [ + "gene_synonym", + "EcoGene:EG11377" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26647" + ], + [ + "gene_synonym", + "b3018" + ], + [ + "gene_synonym", + "JW2986" + ], + [ + "gene_synonym", + "NP_417490.1" + ], + [ + "gene_synonym", + "GeneID:947496" + ], + [ + "gene_synonym", + "plsC" + ], + [ + "gene_synonym", + "ECK3009" + ], + [ + "gene_synonym", + "ASAP:ABE-0009910" + ], + [ + "gene_synonym", + "GI:16130914" + ] + ], + "dna_sequence": 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"protein_md5": "aa7c0905c8694c90f6e72488c504e003", + "protein_translation": "MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPTDAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAEREAAGKV", + "protein_translation_length": 245, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG10686" + ], + [ + "gene_synonym", + "parC" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFI2" + ], + [ + "gene_synonym", + "b3019" + ], + [ + "gene_synonym", + "JW2987" + ], + [ + "gene_synonym", + "GeneID:947499" + ], + [ + "gene_synonym", + "ASAP:ABE-0009916" + ], + [ + "gene_synonym", + "ECK3010" + ], + [ + "gene_synonym", + "NP_417491.1" + ], + [ + "gene_synonym", + "GI:16130915" + ] + ], + "dna_sequence": "ATGAGCGATATGGCAGAGCGCCTTGCGCTACATGAATTTACGGAAAACGCCTACTTAAACTACTCCATGTACGTGATCATGGACCGTGCGTTGCCGTTTATTGGTGATGGTCTGAAACCTGTTCAGCGCCGCATTGTGTATGCGATGTCTGAACTGGGCCTGAATGCCAGCGCCAAATTTAAAAAATCGGCCCGTACCGTCGGTGACGTACTGGGTAAATACCATCCGCACGGCGATAGCGCCTGTTATGAAGCGATGGTCCTGATGGCGCAACCGTTCTCTTACCGTTATCCGCTGGTTGATGGTCAGGGGAACTGGGGCGCGCCGGACGATCCGAAATCGTTCGCGGCAATGCGTTACACCGAATCCCGGTTGTCGAAATATTCCGAGCTGCTATTGAGCGAGCTGGGGCAGGGGACGGCTGACTGGGTGCCAAACTTCGACGGCACTTTGCAGGAGCCGAAAATGCTACCTGCCCGTCTGCCAAACATTTTGCTTAACGGCACCACCGGTATTGCCGTCGGCATGGCGACCGATATTCCACCGCATAACCTGCGTGAAGTGGCTCAGGCGGCAATCGCATTAATCGACCAGCCGAAAACCACGCTCGATCAGCTGCTGGATATCGTGCAGGGGCCGGATTATCCGACTGAAGCGGAAATTATCACTTCGCGCGCCGAGATCCGTAAAATCTACGAGAACGGACGTGGTTCAGTGCGTATGCGCGCGGTGTGGAAGAAAGAAGATGGCGCGGTGGTTATCAGCGCATTGCCGCATCAGGTTTCAGGTGCGCGCGTACTGGAGCAAATTGCTGCGCAAATGCGCAACAAAAAGCTGCCGATGGTTGACGATCTGCGCGATGAATCTGACCACGAGAACCCGACCCGCCTGGTGATTGTGCCGCGTTCCAACCGCGTGGATATGGATCAGGTGATGAACCACCTCTTCGCTACCACCGATCTGGAAAAGAGCTATCGTATTAACCTTAATATGATCGGTCTGGATGGTCGTCCGGCGGTGAAAAACCTGCTGGAAATCCTCTCCGAATGGCTGGTGTTCCGCCGCGATACCGTGCGCCGCCGACTGAACTATCGTCTGGAGAAAGTCCTCAAGCGCCTGCATATCCTCGAAGGTTTGCTGGTGGCGTTTCTCAATATCGACGAAGTGATTGAGATCATTCGTAATGAAGATGAACCGAAACCGGCGCTGATGTCGCGGTTTGGCCTTACGGAAACCCAGGCGGAAGCGATCCTCGAACTGAAACTGCGTCATCTTGCCAAACTGGAAGAGATGAAGATTCGCGGTGAGCAGAGTGAACTGGAAAAAGAGCGCGACCAGTTGCAGGGCATTTTGGCTTCCGAGCGTAAAATGAATAACCTGCTGAAGAAAGAACTGCAGGCAGACGCGCAAGCCTACGGTGACGATCGTCGTTCGCCGTTGCAGGAACGCGAAGAAGCGAAAGCGATGAGCGAGCACGACATGCTGCCGTCTGAACCTGTCACCATTGTGCTGTCGCAGATGGGCTGGGTACGCAGCGCTAAAGGCCATGATATCGACGCGCCGGGCCTGAATTATAAAGCGGGTGATAGCTTCAAAGCGGCGGTGAAAGGTAAGAGCAACCAACCGGTAGTGTTTGTTGATTCCACCGGTCGTAGCTATGCCATTGACCCGATTACGCTGCCGTCGGCGCGTGGTCAGGGCGAGCCGCTCACCGGCAAATTAACGTTGCCGCCTGGGGCGACCGTTGACCATATGCTGATGGAAAGCGACGATCAGAAACTGCTGATGGCTTCCGATGCGGGTTACGGTTTCGTCTGCACCTTTAACGATCTGGTGGCGCGTAACCGTGCAGGTAAGGCTTTGATCACCTTACCGGAAAATGCCCATGTTATGCCGCCGGTGGTGATTGAAGATGCTTCCGATATGCTGCTGGCAATCACTCAGGCAGGCCGTATGTTGATGTTCCCGGTAAGTGATCTGCCGCAGCTGTCGAAGGGCAAAGGCAACAAGATTATCAACATTCCATCGGCAGAAGCCGCGCGTGGAGAAGATGGTCTGGCGCAATTGTACGTTCTGCCGCCGCAAAGCACGCTGACCATTCATGTTGGGAAACGCAAAATTAAACTGCGCCCGGAAGAGTTACAGAAAGTCACTGGCGAACGTGGACGCCGCGGTACGTTGATGCGCGGTTTGCAGCGTATCGATCGTGTTGAGATCGACTCTCCTCGCCGTGCCAGCAGCGGTGATAGCGAAGAGTAA", + "dna_sequence_length": 2259, + "functions": [ + "DNA topoisomerase IV, subunit A" + ], + "id": "CDS_2969", + "location": [ + [ + "NC_000913", + 3165973, + "-", + 2259 + ] + ], + "md5": "27178e2d2d327c104f6cf14b37a29787", + "parent_gene": "", + "protein_md5": "a8ab4921f417360aa1025821a5f3de3c", + "protein_translation": "MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTEAEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEIIRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGILASERKMNNLLKKELQADAQAYGDDRRSPLQEREEAKAMSEHDMLPSEPVTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAARGEDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTGERGRRGTLMRGLQRIDRVEIDSPRRASSGDSEE", + "protein_translation_length": 752, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_417492.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0009920" + ], + [ + "gene_synonym", + "EcoGene:EG13021" + ], + [ + "gene_synonym", + "JW2988" + ], + [ + "gene_synonym", + "b3020" + ], + [ + "gene_synonym", + "GeneID:947140" + ], + [ + "gene_synonym", + "ygiS" + ], + [ + "gene_synonym", + "ECK3011" + ], + [ + "gene_synonym", + "GI:16130916" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46863" + ] + ], + "dna_sequence": 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"", + "protein_md5": "265d0972bd15046d7555cfda792abe62", + "protein_translation": "MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIMLLISLMEMLPAALAAEGMSPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLPKSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPVYAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAIMAAVAGIMVALSVDELMPLAKEIDPNNNPSYGVLCGMSVMGFSLVLLQTAGIG", + "protein_translation_length": 257, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7J0" + ], + [ + "gene_synonym", + "JW3009" + ], + [ + "gene_synonym", + "GeneID:947526" + ], + [ + "gene_synonym", + "GI:16130937" + ], + [ + "gene_synonym", + "luxH" + ], + [ + "gene_synonym", + "EcoGene:EG10465" + ], + [ + "gene_synonym", + "ECK3032" + ], + [ + "gene_synonym", + "htrP" + ], + [ + "gene_synonym", + "ribB" + ], + [ + "gene_synonym", + "NP_417513.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0009980" + ], + [ + "gene_synonym", + "b3041" + ] + ], + "dna_sequence": 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"MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS", + "protein_translation_length": 217, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG13031" + ], + [ + "gene_synonym", + "NP_417514.4" + ], + [ + "gene_synonym", + "GI:90111530" + ], + [ + "gene_synonym", + "yqiC" + ], + [ + "gene_synonym", + "ECK3033" + ], + [ + "gene_synonym", + "JW5505" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46868" + ], + [ + "gene_synonym", + "ASAP:ABE-0009987" + ], + [ + "gene_synonym", + "b3042" + ], + [ + "gene_synonym", + "GeneID:947524" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW3011" + ], + [ + "gene_synonym", + "ygiL" + ], + [ + "gene_synonym", + "EcoGene:EG12363" + ], + [ + "gene_synonym", + "ECK3034" + ], + [ + "gene_synonym", + "GeneID:947522" + ], + [ + "gene_synonym", + "b3043" + ] + ], + "dna_sequence": "ATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTATTAAACCAGGTGACGAAGATTTAACTGTAAATCTGGGTGAAGTAGCAGATACCGTACTGAAAAGCGATCAGAAATCTTTGGCTGAACCTTTCACTATTCACCTGCAGGACTGCATGCTGAGTCAGGGTGGAACTACTTATTCAAAAGCGAAGGTTACTTTCACTACAGCAAATACCATGACGGGTCAGTCTGATCTTCTGAAAAATACCAAAGAAACTGAAATCGGCGGCGCCACTGGCGTTGGCGTACGTATTCTGGACAGCCAGAGCGGCGAAGTAACTTTAGGTACTCCGGTAGTAATTACGTTCAACAATACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAA", + "dna_sequence_length": 552, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_2992", + "location": [ + [ + "NC_000913", + 3185414, + "+", + 552 + ] + ], + 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"gene_synonym", + "JW5511" + ], + [ + "gene_synonym", + "ASAP:ABE-0010104" + ], + [ + "gene_synonym", + "EcoGene:EG10252" + ], + [ + "gene_synonym", + "b3076" + ] + ], + "dna_sequence": 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"MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLPLSGQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMWQMEGHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRIFTLSDGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFDISAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRTDFDEAYCDATLSCEVVLENLAASPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDIKVRDGLFWINNRYVMLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDVESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHYEEDRDAEVVDIISTMYTRVPLMNEFGEYPHPKPRIICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDHGNVWYKFGGDYGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIAPVKIHARDLTRGELKVENKLWFTTLDDYTLHAEVRAEGETLATQQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSRTRYSEAGHPIATYQFPLKENTAQPVPFAPNNARPLTLEDDRLSCTVRGYNFAITFSKMSGKPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQSDGEVLIISRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSGERYGDYPHIIPCIGFTMGINGEYDQVAYYGRGPGENYADSQQANIIDIWRSTVDAMFENYPFPQNNGNRQHVRWTALTNRHGNGLLVVPQRPINFSAWHYTQENIHAAQHCNELQRSDDITLNLDHQLLGLGSNSWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFFSTNLHSENKQ", 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"gene_synonym", + "b3081" + ], + [ + "gene_synonym", + "ECK3071" + ], + [ + "gene_synonym", + "JW3052" + ], + [ + "gene_synonym", + "NP_417552.1" + ], + [ + "gene_synonym", + "GeneID:947594" + ], + [ + "gene_synonym", + "GI:16130976" + ], + [ + "gene_synonym", + "fadH" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42593" + ] + ], + "dna_sequence": 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"MSYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTADQLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPNRALAQPLIDSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI", + "protein_translation_length": 672, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ygjM" + ], + [ + "gene_synonym", + "ASAP:ABE-0010126" + ], + [ + "gene_synonym", + "EcoGene:EG12724" + ], + [ + "gene_synonym", + "b3082" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67701" + ], + [ + "gene_synonym", + "ECK3072" + ], + [ + "gene_synonym", + "GeneID:947593" + ], + [ + "gene_synonym", + "NP_417553.1" + ], + [ + "gene_synonym", + "JW3053" + ], + [ + "gene_synonym", + "higA" + ], + [ + "gene_synonym", + "GI:16130977" + ] + ], + "dna_sequence": "ATGATTGCGATTGCCGACATCTTGCAAGCAGGAGAAAAGCTAACTGCTGTGGCACCTTTTCTGGCGGGTATTCAGAACGAGGAACAATACACCCAGGCGCTGGAACTGGTAGATCATCTGCTGCTCAACGATCCTGAAAACCCCTTGCTGGATCTGGTGTGTGCCAAAATAACCGCGTGGGAAGAATCAGCGCCCGAATTTGCGGAATTTAATGCCATGGCTCAAGCCATGCCTGGCGGTATAGCCGTGATTCGTACCCTTATGGATCAATATGGTTTAACCCTTTCCGATCTGCCGGAAATTGGCAGTAAATCTATGGTGTCACGCGTTTTGAGCGGGAAGAGGAAATTAACGCTGGAACACGCTAAAAAATTGGCAACGCGATTCGGCATTTCTCCCGCCTTGTTTATTGATTAA", + "dna_sequence_length": 417, + "functions": [ + "antitoxinof the HigB-HigA toxin-antitoxin system" + ], + "id": "CDS_3032", + "location": [ + [ + "NC_000913", + 3234144, + "-", + 417 + ] + ], + "md5": "81181b6e21249909808f2b55be2d54a6", + "parent_gene": "", + "protein_md5": "46394d8005da3d75cb3a9c4665a02bdc", + 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"gene_synonym", + "rsmD" + ], + [ + "gene_synonym", + "ECK3074" + ], + [ + "gene_synonym", + "rlmG" + ], + [ + "gene_synonym", + "b3084" + ], + [ + "gene_synonym", + "JW5513" + ], + [ + "gene_synonym", + "GI:90111535" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42596" + ], + [ + "gene_synonym", + "GeneID:947589" + ], + [ + "gene_synonym", + "EcoGene:EG12726" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK3102" + ], + [ + "gene_synonym", + "b3113" + ], + [ + "gene_synonym", + "ASAP:ABE-0010240" + ], + [ + "gene_synonym", + "yhaR" + ], + [ + "gene_synonym", + "NP_417583.4" + ], + [ + "gene_synonym", + "JW5521" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGL2" + ], + [ + "gene_synonym", + "GI:90111542" + ] + ], + "dna_sequence": "ATGAAAAAGATTATCGAAACGCAACGTGCCCCAGGCGCAATCGGCCCTTATGTTCAGGGCGTTGATTTAGGCAGCATGGTCTTCACCTCCGGGCAAATACCGGTTTGCCCACAGACCGGTGAGATCCCGGCTGATGTGCAAGATCAGGCGCGTTTAAGCCTCGAAAACGTCAAAGCGATCGTGGTTGCTGCCGGGCTGAGCGTGGGCGATATCATCAAGATGACCGTGTTTATCACCGATCTGAATGATTTTGCCACCATCAACGAAGTCTATAAGCAGTTCTTCGATGAGCATCAGGCGACCTATCCGACCCGGAGCTGTGTGCAGGTCGCGCGTTTGCCGAAAGATGTGAAGCTGGAAATTGAAGCCATCGCAGTACGTAGTGCGTAA", + "dna_sequence_length": 390, + "functions": [ + "putative reactive intermediate deaminase" + ], + "id": "CDS_3061", + "location": [ + [ + "NC_000913", + 3260110, + "-", + 390 + ] + ], + "md5": "93c83ad1545ab3ccbedff787eef8c2c1", + "parent_gene": 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"gene_synonym", + "GI:145698314" + ], + [ + "gene_synonym", + "ASAP:ABE-0010271" + ], + [ + "gene_synonym", + "JW3093" + ], + [ + "gene_synonym", + "yhaD" + ], + [ + "gene_synonym", + "b3124" + ], + [ + "gene_synonym", + "EcoGene:EG11175" + ], + [ + "gene_synonym", + "ECK3112" + ] + ], + "dna_sequence": 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"location": [ + [ + "NC_000913", + 3272751, + "-", + 885 + ] + ], + "md5": "9575b72c63c643c71fe1c680c204fe3f", + "parent_gene": "", + "protein_md5": "328fc96a37dfb45d815016e902fc921c", + "protein_translation": "MKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGTADHSALACYYEKLAKVEVTR", + "protein_translation_length": 294, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "garL" + ], + [ + "gene_synonym", + "ECK3114" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23522" + ], + [ + "gene_synonym", + "ASAP:ABE-0010276" + ], + [ + "gene_synonym", + "NP_417595.1" + ], + [ + "gene_synonym", + "GeneID:947630" + ], + [ + "gene_synonym", + "JW3095" + ], + [ + "gene_synonym", + "GI:16131018" + ], + [ + "gene_synonym", + "yhaF" + ], + [ + "gene_synonym", + 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"ATGCCACAACGACACCACCAGGGACATAAACGCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCACTGTACCGTGATGCAAGAGGTTACGTCTCCCCTTCTCGTTGGGACGATGGTATACCAACGCTGTTTACCAACTACTCGTTTACAGGTTCTGATAACCGTTACCGCCAGGGCAATCGTAGCCAACGACAGTACCTGAATATGCAAAATGGTGCTAATTTTGGCCCCTGGCGATTACGCAACTATTCCACATGGACACGCAACGATCAGACATCAAGCTGGAATACCATCAGTAGTTATTTACAACGTGATATCAAGGCGTTGAAGTCTCAGTTGCTTCTGGGAGAAAGCGCCACCAGCGGCAGTATTTTTTCCAGCTACACCTTTACTGGCGTGCAACTCGCTTCCGACGATAATATGTTGCCAAACAGCCAGCGCGGATTTGCCCCAACGGTACGCGGTATCGCAAACAGTAGTGCAATCGTGACTATCAGGCAAAATGGTTATGTGATCTATCAAAGCAACGTGTCAGCGGGTGCCTTTGAAATTAACGATCTCTACCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGATTATTATGCGCTGGGGATCGGTATCGGCGGCACACTTGGCGCACTGGGCGCGTTGTCGATGGATATCAACAGAGCTGACACCCAATTCGATAACCAGCACTCTTTTCATGGCTATCAATGGCGTACGCAGTACATCAAAGATATCCCGGAAACCAACACCAATATCGCTGTCAGCTACTATCGCTATACCAACGATGGCTATTTTAGTTTTAATGAAGCCAATACCCGCAATTGGGACTATAACAGTCGCCAAAAAAGTGAAATTCAATTCAACATCAGCCAGACAATATTTGATGGGGTAAGTCTGTATGCCTCCGGTTCGCAGCAAGACTATTGGGGCAATAACGATAAAAACAGGAATATCTCTGTTGGGGTTTCCGGCCAGCAATGGGGAGTTGGTTACAGCCTGAATTATCAATACAGCCGCTACACTGATCAAAATAATGACCGCGCACTCTCTTTGAATCTCAGTATTCCGTTAGAACGCTGGTTACCGCGTAGCCGGGTTTCCTATCAGATGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGATAACGTCGATCTTGAACAAACAACACAGTTTGTGGTGCCCAACAGAGGTGCAATGGTAGCGGCGCGTTTCAACGCCAATATCGGTTATCGCGTACTTGTTACAGTCAGCGATCGCAACGGTAAACCGTTGCCCTTTGGCGCTCTTGCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAA", 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"MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYYFDPIMLETTKSGMQTTDLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQLLQPQFTVEQLRELGIKVDEIPALAEKDDDSVINSLEQIIPGTAAEFDFNHQQLNLSIPQIALYRDARGYVSPSRWDDGIPTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPWRLRNYSTWTRNDQTSSWNTISSYLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSSAIVTIRQNGYVIYQSNVSAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYSSLPMMQRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYGGLLGSEDYYALGIGIGGTLGALGALSMDINRADTQFDNQHSFHGYQWRTQYIKDIPETNTNIAVSYYRYTNDGYFSFNEANTRNWDYNSRQKSEIQFNISQTIFDGVSLYASGSQQDYWGNNDKNRNISVGVSGQQWGVGYSLNYQYSRYTDQNNDRALSLNLSIPLERWLPRSRVSYQMTSQKDRPTQHEMRLDGSLLDDGRLSYSLEQSLDDDNNHNSSLNASYRSPYGTFSAGYSYGNDSSQYNYGVTGGVVIHPHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPFGYAVVPYLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNRGAMVAARFNANIGYRVLVTVSDRNGKPLPFGALASNDDTGQQSIVDEGGILYLSGISSKSQSWTVRWGNQADQQCQFAFSTPDSEPTTSVLQGTAQCH", + "protein_translation_length": 838, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:947654" + ], + [ + "gene_synonym", + "ECK3133" + ], + [ + "gene_synonym", + "GI:16131037" + ], + [ + "gene_synonym", + "NP_417614.1" + ], + [ + "gene_synonym", + "b3145" + ], + [ + "gene_synonym", + "JW3114" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43319" + ], + [ + "gene_synonym", + "ASAP:ABE-0010335" + ], + [ + "gene_synonym", + "yraK" + ], + [ + "gene_synonym", + "EcoGene:EG12776" + ] + ], + "dna_sequence": 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"ASAP:ABE-0010337" + ], + [ + "gene_synonym", + "JW3115" + ], + [ + "gene_synonym", + "NP_417615.1" + ], + [ + "gene_synonym", + "yraL" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67087" + ], + [ + "gene_synonym", + "GI:16131038" + ] + ], + "dna_sequence": 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"lpoA" + ], + [ + "gene_synonym", + "GI:16131039" + ] + ], + "dna_sequence": "ATGGTACCCTCAACATTTTCTCGTTTGAAAGCCGCGCGTTGTCTGCCTGTTGTTCTGGCAGCCCTGATTTTCGCCGGTTGTGGCACCCATACTCCCGATCAGTCCACTGCTTATATGCAGGGCACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGTGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAAAACACTGCTGGCGGTAGAGATTAAACTGGCGCAGAAAGATTTTGCTGGCGCGCAAAACTTGCTGGCGAAAATCACACCTGCCGATTTAGAACAAAACCAGCAAGCGCGTTACTGGCAGGCAAAAATCGATGCCAGCCAGGGGCGTCCTTCCATTGATTTACTGCGCGCGTTAATTGCTCAGGAACCGCTGCTTGGCGCGAAAGAAAAACAGCAGAATATTGATGCCACCTGGCAGGCGCTCTCCTCCATGACTCAGGAACAGGCGAATACGCTGGTGATCAACGCCGACGAAAATATTCTGCAAGGCTGGCTGGATCTGCAGCGCGTCTGGTTTGATAACCGTAACGATCCCGACATGATGAAAGCCGGGATCGCCGACTGGCAGAAACGTTATCCGAACAATCCGGGCGCGAAAATGCTGCCAACGCAGTTGGTTAACGTAAAAGCGTTTAAACCAGCCTCGACCAACAAAATCGCCCTGCTGTTGCCACTGAATGGCCAGGCAGCGGTATTTGGTCGCACTATTCAGCAAGGCTTTGAAGCGGCGAAAAATATCGGCACTCAGCCAGTGGCAGCTCAGGTAGCTGCCGCACCTGCCGCAGACGTAGCTGAACAACCTCAGCCGCAAACCGTGGATGGCGTTGCCAGCCCGGCACAAGCCTCGGTTAGCGATCTGACCGGTGAACAGCCTGCAGCCCAGCCGGTGCCTGTAAGCGCCCCGGCGACAAGCACCGCAGCGGTAAGCGCACCCGCAAATCCATCCGCAGAGCTGAAAATCTACGATACCTCATCACAACCACTTAGCCAGATCTTAAGCCAGGTTCAGCAGGATGGCGCGAGTATTGTGGTCGGTCCGTTGCTGAAAAATAACGTTGAAGAGTTGCTGAAGAGCAACACTCCGCTGAACGTACTGGCACTGAACCAGCCGGAGAATATCGAAAATCGCGTCAATATTTGTTACTTCGCGCTTTCACCGGAAGACGAAGCGCGCGATGCAGCGCGTCATATTCGTGACCAGGGTAAACAAGCGCCGCTGGTGCTGATCCCACGCAGTTCATTGGGCGATCGCGTAGCCAATGCGTTTGCGCAAGAGTGGCAGAAACTGGGCGGCGGCACCGTTCTGCAACAAAAATTTGGTTCCACCAGCGAATTACGCGCGGGTGTTAACGGCGGTTCTGGTATTGCTTTAACGGGTAGCCCGATTACTCTCAGAGCGACAACCGACTCCGGCATGACGACCAACAATCCAACGCTGCAAACCACGCCAACCGATGACCAGTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACGATTATTCACTGGCTCGCATGTATGCGATGGGCGTCGATGCCTGGTCGCTGGCAAATCATTTCTCACAAATGCGCCAGGTTCAGGGTTTTGAAATCAACGGTAATACCGGAAGCCTGACGGCTAACCCGGATTGCGTGATTAACAGGAACTTATCATGGCTACAGTACCAACAAGGTCAGGTAGTCCCCGTCAGTTAA", 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"gene_synonym", + "JW3117" + ], + [ + "gene_synonym", + "b3148" + ], + [ + "gene_synonym", + "yraN" + ], + [ + "gene_synonym", + "GeneID:947662" + ], + [ + "gene_synonym", + "ASAP:ABE-0010346" + ] + ], + "dna_sequence": "ATGGCTACAGTACCAACAAGGTCAGGTAGTCCCCGTCAGTTAACCACCAAACAGACCGGCGATGCGTGGGAAGCACAAGCGCGTCGCTGGCTGGAAGGCAAAGGACTGCGGTTTATCGCCGCTAACGTGAACGAGCGTGGCGGCGAGATCGATCTGATAATGCGTGAAGGCCGGACCACCATTTTTGTCGAGGTACGCTATCGCCGCTCTGCGCTTTATGGCGGCGCGGCAGCCAGTGTGACCCGCAGCAAACAACACAAATTATTACAGACTGCCCGCTTGTGGCTCGCGCGTCATAATGGGAGTTTTGATACTGTGGATTGCCGGTTCGATGTGGTAGCCTTCACCGGGAATGAGGTTGAGTGGATTAAGGATGCCTTTAATGACCACTCATAA", + "dna_sequence_length": 396, + "functions": [ + "UPF0102 family protein" + ], + "id": "CDS_3094", + "location": [ + [ + "NC_000913", + 3295394, + "+", + 396 + ] + ], + "md5": "6d07582173b77b57a1cd8b5fbbb585f1", + "parent_gene": "", + "protein_md5": "e61d6c47f0c413069058deb6dcf035d8", + "protein_translation": "MATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVNERGGEIDLIMREGRTTIFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEWIKDAFNDHS", + "protein_translation_length": 131, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW3118" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P66817" + ], + [ + "gene_synonym", + "GI:16131041" + ], + [ + "gene_synonym", + "b3149" + ], + [ + "gene_synonym", + "ECK3137" + ], + [ + "gene_synonym", + "GeneID:947661" + ], + [ + "gene_synonym", + "NP_417618.1" + ], + [ + "gene_synonym", + "diaA" + ], + [ + "gene_synonym", + "ASAP:ABE-0010348" + ], + [ + "gene_synonym", + "yraO" + ], + [ + "gene_synonym", + "EcoGene:EG12780" + ] + ], + "dna_sequence": 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"NC_000913", + 3298846, + "-", + 636 + ] + ], + "md5": "506f45336a023863370725a059b32a93", + "parent_gene": "", + "protein_md5": "5f6ff897400e90b230e3132fadc227a3", + "protein_translation": "MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGVFNPHDPQLSDALAQVTDPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLGAQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNETLFAPLFRLLPGNWKSIDARDVARVMLAESMRPEHEGVTILSSSELRKRAE", + "protein_translation_length": 211, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG12784" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45470" + ], + [ + "gene_synonym", + "NP_417622.2" + ], + [ + "gene_synonym", + "ECK3141" + ], + [ + "gene_synonym", + "yhbO" + ], + [ + "gene_synonym", + "b3153" + ], + [ + "gene_synonym", + "GeneID:947666" + ], + [ + "gene_synonym", + "JW5529" + ], + [ + "gene_synonym", + "ASAP:ABE-0010361" + ], + [ + "gene_synonym", + "GI:90111548" + ] + ], + "dna_sequence": 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"CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG14490" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P618" + ], + [ + "gene_synonym", + "GI:226524750" + ], + [ + "gene_synonym", + "YP_002791258.1" + ], + [ + "gene_synonym", + "GeneID:7751619" + ], + [ + "gene_synonym", + "yrbN" + ], + [ + "gene_synonym", + "ECK4500" + ], + [ + "gene_synonym", + "b4685" + ] + ], + "dna_sequence": "ATGAAAATTGCTGATCAATTTCATGATGAGTTATGTAGACTGGCCGCCATTAATTTTGAGGCACACGTACTACATGGCTGA", + "dna_sequence_length": 81, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3109", + "location": [ + [ + "NC_000913", + 3307933, + "-", + 81 + ] + ], + "md5": "9070402bb42e54e46262b5c879c712ac", + "parent_gene": "", + "protein_md5": "c8ec2c77c6bf99c1b43150229a9fe1ad", + "protein_translation": "MKIADQFHDELCRLAAINFEAHVLHG", + "protein_translation_length": 26, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b3163" + ], + [ + "gene_synonym", + "GI:16131055" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFB1" + ], + [ + "gene_synonym", + "yhbM" + ], + [ + "gene_synonym", + "ECK3151" + ], + [ + "gene_synonym", + "nlpI" + ], + [ + "gene_synonym", + "JW3132" + ], + [ + "gene_synonym", + "GeneID:947673" + ], + [ + "gene_synonym", + "NP_417632.1" + ], + [ + "gene_synonym", + "EcoGene:EG12371" + ], + [ + "gene_synonym", + "ASAP:ABE-0010395" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16131059" + ], + [ + "gene_synonym", + "rbfA" + ], + [ + "gene_synonym", + "ECK3156" + ], + [ + "gene_synonym", + "EcoGene:EG11178" + ], + [ + "gene_synonym", + "NP_417636.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7G2" + ] + ], + "dna_sequence": "ATGGCGAAAGAATTTGGTCGCCCGCAGCGCGTAGCGCAGGAAATGCAAAAAGAGATCGCTCTCATCCTGCAGCGTGAAATTAAAGATCCTCGCCTGGGCATGATGACCACCGTTTCCGGTGTCGAAATGTCTCGCGACCTGGCGTATGCCAAAGTATATGTGACGTTCCTCAACGACAAAGATGAAGACGCGGTTAAAGCGGGCATCAAAGCGTTGCAAGAAGCTTCTGGTTTCATCCGCAGCCTGCTGGGGAAAGCGATGCGCCTGCGTATCGTGCCGGAACTGACCTTCTTCTACGACAACTCTCTGGTTGAAGGGATGCGCATGTCAAACCTGGTGACCAGCGTGGTCAAACATGACGAAGAACGTCGTGTTAACCCGGACGACAGCAAGGAGGACTAA", + "dna_sequence_length": 402, + "functions": [ + "30s ribosome binding factor" + ], + "id": "CDS_3114", + "location": [ + [ + "NC_000913", + 3313178, + "-", + 402 + ] + ], + "md5": "ad6a56f02b3e0232703247a97744e487", + "parent_gene": "", + "protein_md5": "3bd4474276d81e34a5f41940e5023c8f", + "protein_translation": "MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPDDSKED", + "protein_translation_length": 133, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG10505" + ], + [ + "gene_synonym", + "GeneID:947684" + ], + [ + "gene_synonym", + "gicD" + ], + [ + "gene_synonym", + "b3168" + ], + [ + "gene_synonym", + "ECK3157" + ], + [ + "gene_synonym", + "infB" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A705" + ], + [ + "gene_synonym", + "ssyG" + ], + [ + "gene_synonym", + "JW3137" + ], + [ + "gene_synonym", + "NP_417637.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0010410" + ], + [ + "gene_synonym", + "GI:16131060" + ] + ], + "dna_sequence": 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"MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQTLIDHLNQKNSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREAEESAKREAQQKAEREAAEQAKREAAEQAKREAAEKDKVSNQQDDMTKNAQAEKARREQEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTDNAEPTEDSSDYHVTTSQHARQAEDESDREVEGGRGRGRNAKAARPKKGNKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRTGDVIEVFEIIEIQRTIA", + "protein_translation_length": 890, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK3158" + ], + [ + "gene_synonym", + "GI:16131061" + ], + [ + "gene_synonym", + "GeneID:947682" + ], + [ + "gene_synonym", + "JW3138" + ], + [ + "gene_synonym", + "b3169" + ], + [ + "gene_synonym", + "NP_417638.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFF6" + ], + [ + "gene_synonym", + "EcoGene:EG10665" + ], + [ + "gene_synonym", + "nusA" + ], + [ + "gene_synonym", + "ASAP:ABE-0010413" + ] + ], + "dna_sequence": 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] + ], + "md5": "a9ecc1d4e5c3039bb43ce0935a9dfa90", + "parent_gene": "", + "protein_md5": "c9d64c9174aefb2a599ee9a9f81fde03", + "protein_translation": "MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPAKPTSDIPN", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_417643.1" + ], + [ + "gene_synonym", + "mrsA" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31120" + ], + [ + "gene_synonym", + "yhbF" + ], + [ + "gene_synonym", + "b3176" + ], + [ + "gene_synonym", + "EcoGene:EG11553" + ], + [ + "gene_synonym", + "GeneID:947692" + ], + [ + "gene_synonym", + "ASAP:ABE-0010439" + ], + [ + "gene_synonym", + "GI:16131066" + ], + [ + "gene_synonym", + "ECK3165" + ], + [ + "gene_synonym", + "JW3143" + ], + [ + "gene_synonym", + "glmM" + ] + ], + "dna_sequence": 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3324911, + "-", + 849 + ] + ], + "md5": "e9a40b6318df99c73ea9b8b6a09e43aa", + "parent_gene": "", + "protein_md5": "3e5a1611818dc3e68ad57f45d999d7a6", + "protein_translation": "MKLFAQGTSLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAKENKRYE", + "protein_translation_length": 282, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "std" + ], + [ + "gene_synonym", + "tolZ" + ], + [ + "gene_synonym", + "mrsC" + ], + [ + "gene_synonym", + "hflB" + ], + [ + "gene_synonym", + "NP_417645.1" + ], + [ + "gene_synonym", + "EcoGene:EG11506" + ], + [ + "gene_synonym", + "ASAP:ABE-0010444" + ], + [ + "gene_synonym", + "b3178" + ], + [ + "gene_synonym", + "GI:16131068" + ], + [ + "gene_synonym", + "ftsH" + ], + [ + "gene_synonym", + "GeneID:947690" + ], + [ + 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"gene_synonym", + "yrbJ" + ], + [ + "gene_synonym", + "yrbI" + ], + [ + "gene_synonym", + "NP_417665.1" + ], + [ + "gene_synonym", + "ECK3187" + ], + [ + "gene_synonym", + "ASAP:ABE-0010506" + ], + [ + "gene_synonym", + "GI:16131088" + ] + ], + "dna_sequence": "ATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAAGAGCTGAAAGCGTTCAATGTTCGTGACGGTTATGGCATTCGTTGTGCGCTCACCTCTGATATTGAAGTCGCTATCATTACCGGGCGAAAGGCTAAACTGGTAGAAGATCGTTGTGCCACATTGGGGATCACTCACTTGTATCAGGGGCAGTCAAACAAACTGATCGCCTTTAGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGA", + "dna_sequence_length": 567, + "functions": [ + "3-deoxy-D-manno-octulosonate 8-phosphate phosphatase" + ], + "id": "CDS_3143", + "location": [ + [ + "NC_000913", + 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"ATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCGGTTCTGGTGATGATCGGCATTAATATGGCCGAAAAAGACGATACCGCCCAGGTGGTCGTCAACAACAATGATCCCACCTATAAAAGCGAGCATACGGACACGCTCGTCTATAACCCAGAAGGGGCACTAAGCTATCGATTGATTGCTCAACACGTTGAATATTATTCCGATCAGGCCGTTTCGTGGTTTACGCAGCCGGTACTTACCACGTTTGATAAGGATAAAATCCCGACATGGTCCGTAAAAGCAGATAAAGCCAAGCTGACCAATGACCGGATGCTCTATTTATATGGACACGTTGAAGTCAACGCACTTGTGCCAGACTCTCAACTTCGCAGAATCACGACGGATAACGCGCAGATCAATCTGGTGACGCAGGATGTTACCTCTGAAGACCTCGTCACGTTATACGGAACAACATTTAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTGAAAAGGTTAGAACATCCTATGAAATTCAAAACAAACAAACTCAGCCTTAA", + "dna_sequence_length": 576, + "functions": [ + "periplasmic membrane-anchored LPS-binding protein", + "LPS export protein" + ], + "id": "CDS_3144", + "location": [ + [ + "NC_000913", + 3342836, + "+", + 576 + ] + ], + "md5": "6e6513915def6d56b81a5dc4ce8f88ee", + "parent_gene": "", + "protein_md5": "e7b335ee1a6eca37cc7ce70d47aeab74", + "protein_translation": "MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKSEHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAKLTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRTSYEIQNKQTQP", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:947920" + ], + [ + "gene_synonym", + "NP_417667.1" + ], + [ + "gene_synonym", + "yhbN" + ], + [ + "gene_synonym", + "b3200" + ], + [ + "gene_synonym", + "GI:16131090" + ], + [ + "gene_synonym", + "ECK3189" + ], + [ + "gene_synonym", + "JW3167" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADV1" + ], + [ + "gene_synonym", + "ASAP:ABE-0010510" + ], + [ + "gene_synonym", + "lptA" + ], + [ + "gene_synonym", + "EcoGene:EG12618" + ] + ], + "dna_sequence": "ATGAAATTCAAAACAAACAAACTCAGCCTTAATCTTGTGCTTGCCAGCTCACTTCTGGCCGCCAGCATTCCGGCATTTGCCGTAACCGGAGACACTGATCAGCCGATCCACATTGAATCGGACCAGCAATCTCTTGATATGCAAGGCAACGTGGTTACCTTTACCGGTAATGTCATCGTCACCCAGGGCACCATCAAAATTAATGCCGACAAAGTGGTCGTTACCCGTCCGGGCGGCGAACAAGGTAAAGAAGTGATTGACGGCTACGGTAAACCGGCAACGTTCTACCAGATGCAGGACAACGGTAAACCCGTTGAAGGTCACGCTTCCCAGATGCACTACGAACTGGCAAAAGATTTTGTCGTTCTGACGGGTAATGCTTATCTGCAGCAGGTCGATAGCAACATTAAGGGCGATAAGATCACTTACCTGGTGAAAGAGCAGAAAATGCAGGCTTTCAGCGACAAAGGCAAGCGCGTAACAACCGTTCTGGTGCCGTCGCAGCTGCAGGACAAAAACAACAAAGGCCAGACCCCGGCACAGAAGAAGGGTAATTAA", + "dna_sequence_length": 558, + "functions": [ + "lipopolysaccharide export ABC transporter periplasmic binding protein", + "Lipid A binding protein", + "LPS export and assembly protein" + ], + "id": "CDS_3145", + "location": [ + [ + "NC_000913", + 3343380, + "+", + 558 + ] + ], + "md5": "6dc11a40bb909355adaf02d8dc6e57bf", + "parent_gene": "", + "protein_md5": "9e16eff5a04c7b0ce378fdc814bd2127", + "protein_translation": "MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQSLDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNGKPVEGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRVTTVLVPSQLQDKNNKGQTPAQKKGN", + "protein_translation_length": 185, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yhbG" + ], + [ + "gene_synonym", + "GeneID:947725" + ], + [ + "gene_synonym", + "NP_417668.1" + ], + [ + "gene_synonym", + "b3201" + ], + [ + "gene_synonym", + "GI:16131091" + ], + [ + "gene_synonym", + "ASAP:ABE-0010512" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9V1" + ], + [ + "gene_synonym", + "JW3168" + ], + [ + "gene_synonym", + "EcoGene:EG11680" + ], + [ + "gene_synonym", + "lptB" + ], + [ + "gene_synonym", + "ECK3190" + ] + ], + "dna_sequence": "ATGGCAACATTAACTGCAAAGAACCTTGCAAAAGCCTATAAAGGCCGTCGCGTGGTAGAAGACGTCAGCCTGACCGTCAACTCCGGGGAAATTGTCGGTCTGCTGGGGCCAAACGGTGCCGGTAAGACCACCACTTTCTACATGGTTGTAGGCATTGTGCCGCGCGATGCGGGCAACATCATTATTGATGATGACGATATCAGTCTGCTGCCTCTGCATGCACGCGCGCGCCGCGGTATCGGCTATCTGCCACAGGAAGCCTCCATTTTCCGTCGCCTCAGCGTTTACGATAACCTGATGGCGGTACTGCAAATTCGTGACGACTTGTCTGCTGAACAACGTGAAGACCGCGCGAACGAGCTGATGGAAGAGTTTCACATTGAGCACCTGCGTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGCCCACGGCACGCCTACAGAAATCTTACAAGACGAACACGTTAAGCGTGTATACCTTGGGGAAGACTTCAGACTCTGA", + "dna_sequence_length": 726, + "functions": [ + "lipopolysaccharide export ABC transporter ATPase" + ], + "id": "CDS_3146", + "location": [ + [ + "NC_000913", + 3343944, + "+", + 726 + ] + ], + "md5": "fc9e8123db886ef89678d4c4bd24e216", + "parent_gene": "", + 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"MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTMVLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDLSLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSFLDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEKVFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDGTRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSVAEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDDVLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSKSEALLDIPMLEQYLELVGPKLITDGLAVFEKMMPGYVSVLESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQSPDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK", + "protein_translation_length": 778, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010540" + ], + [ + "gene_synonym", + "NP_417678.1" + ], + [ + "gene_synonym", + "ECK3201" + ], + [ + "gene_synonym", + "GeneID:947733" + ], + [ + "gene_synonym", + "EcoGene:EG12809" + ], + [ + "gene_synonym", + "b3211" + ], + [ + "gene_synonym", + "GI:16131101" + ], + [ + "gene_synonym", + "yhcC" + ], + [ + "gene_synonym", + "JW3178" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADW6" + ] + ], + "dna_sequence": 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oxidoreductase, Radical SAM superfamily protein" + ], + "id": "CDS_3156", + "location": [ + [ + "NC_000913", + 3354050, + "-", + 930 + ] + ], + "md5": "e287e19d6d711d3f93f4bdadd400f14b", + "parent_gene": "", + "protein_md5": "386e027e457f0b95276ef25a571eff4e", + "protein_translation": "MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNEHGVQGSALGRPWLPPTE", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_417679.2" + ], + [ + "gene_synonym", + "ASAP:ABE-0010545" + ], + [ + "gene_synonym", + "gltB" + ], + [ + "gene_synonym", + "GI:308209621" + ], + [ + "gene_synonym", + "aspB" + ], + [ + "gene_synonym", + "GeneID:947724" + ], + [ + "gene_synonym", + "EcoGene:EG10403" + ], + [ + "gene_synonym", + "ECK3202" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09831" + ], + [ + "gene_synonym", + "b3212" + ], + [ + "gene_synonym", + "JW3179" + ], + [ + "gene_synonym", + "ossB" + ], + [ + "gene_synonym", + "psiQ" + ] + ], + "dna_sequence": 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+ "dna_sequence_length": 4461, + "functions": [ + "glutamate synthase, large subunit" + ], + "id": "CDS_3157", + "location": [ + [ + "NC_000913", + 3354725, + "+", + 4461 + ] + ], + "md5": "48bd98579663fa1bf1c3d08907bb8c13", + "parent_gene": "", + "protein_md5": "8d3ca885fcf8569e84aca6864ab563a1", + "protein_translation": "MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGAILADGKTGDGCGLLLQKPDRFFRIVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIVEEELQRETLSIVGWRDVPTNEGVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIARRRIEKRLEADKDFYVCSLSNLVNIYKGLCMPTDLPRFYLDLADLRLESAICLFHQRFSTNTVPRWPLAQPFRYLAHNGEINTITGNRQWARARTYKFQTPLIPDLHDAAPFVNETGSDSSSMDNMLELLLAGGMDIIRAMRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWDGPAGIVMSDGRFAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVGPGELMVIDTRSGRILHSAETDDDLKSRHPYKEWMEKNVRRLVPFEDLPDEEVGSRELDDDTLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQQFAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLTTMKEEHYRADTLDITFDVTKTTLEATVKELCDKAEKMVRSGTVLLVLSDRNIAKDRLPVPAPMAVGAIQTRLVDQSLRCDANIIVETASARDPHHFAVLLGFGATAIYPYLAYETLGRLVDTHAIAKDYRTVMLNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDVVGLCFQGAVSRIGGASFEDFQQDLLNLSKRAWLARKPISQGGLLKYVHGGEYHAYNPDVVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGENAVNIADVEPASELFKRFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGRFGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHHDIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARETRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHPGKALYCTENNPPFDNGLLNAQLLQQAKPFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLAADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSHEASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCILGKTGVNFGAGMTGGFAYVLDESGDFRKRVNPELVEVLSVDALAIHEEHLRGLITEHVQHTGSQRGEEILANWSTFATKFALVKPKSSDVKALLGHRSRSAAELRVQAQ", + "protein_translation_length": 1486, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010547" + ], + [ + "gene_synonym", + "GeneID:947723" + ], + [ + "gene_synonym", + "aspB" + ], + [ + "gene_synonym", + "ECK3203" + ], + [ + "gene_synonym", + "gltD" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09832" + ], + [ + "gene_synonym", + "GI:16131103" + ], + [ + "gene_synonym", + "b3213" + ], + [ + "gene_synonym", + "psiQ" + ], + [ + "gene_synonym", + "EcoGene:EG10404" + ], + [ + "gene_synonym", + "NP_417680.1" + ], + [ + "gene_synonym", + "ossB" + ], + [ + "gene_synonym", + "JW3180" + ] + ], + "dna_sequence": "ATGAGTCAGAATGTTTATCAATTTATCGACCTGCAGCGCGTTGATCCGCCAAAGAAACCGCTGAAGATCCGCAAAATTGAGTTTGTTGAAATTTACGAGCCGTTTTCCGAAGGCCAGGCCAAAGCGCAGGCTGACCGCTGCCTGTCGTGCGGCAACCCATACTGCGAGTGGAAATGCCCGGTACACAACTACATCCCGAACTGGCTGAAGCTCGCCAACGAGGGGCGTATTTTTGAAGCGGCGGAACTGTCGCACCAGACCAACACCCTGCCGGAAGTTTGCGGACGAGTCTGCCCGCAAGACCGTCTGTGCGAAGGTTCCTGCACTCTGAACGATGAGTTTGGCGCGGTGACCATCGGCAACATTGAGCGCTATATCAACGATAAAGCGTTCGAGATGGGCTGGCGTCCGGATATGTCTGGTGTGAAACAGACCGGTAAAAAAGTGGCGATTATCGGCGCAGGCCCGGCAGGTCTGGCGTGTGCGGATGTCCTGACGCGTAACGGCGTAAAAGCCGTTGTCTTCGACCGTCATCCAGAAATTGGCGGGCTGCTGACCTTCGGTATTCCGGCCTTCAAGCTGGAAAAAGAGGTAATGACGCGTCGCCGTGAAATCTTCACCGGCATGGGTATTGAATTCAAACTCAATACCGAAGTGGGCCGCGACGTACAGCTGGACGATCTGCTGAGTGATTACGATGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGCCAACACCAAACAGTTAATGGGCTTTGGTGAAACCCGCGACGAACCGTTCGTCAGCATGGAAGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTCCCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAACCGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGCAGATGCGGTGATCATGGCGTTTGGTTTCCGTCCACACAACATGGAATGGCTGGCAAAACACAGCGTCGAGCTGGATTCACAAGGCCGCATCATCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTGGCGGCGATATCGTCCGTGGTTCCGATCTGGTGGTGACCGCTATTGCCGAAGGTCGTAAGGCGGCAGACGGTATTATGAACTGGCTGGAAGTTTAA", 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"protein_translation": "MLRHITFTVFITTSMNTLATGMVPETSVLLVDEKRGEASINIKNTDDHPSLLYTTIVDLPESNKSIRLIPTQPVIRVEAGQVQQVRFLLQATVPLQSEELKRVTFEGIPPKDDKSSRVTVSIRQDLPVLIHPASLPEERETWKFLEWRKNGDQIEISNPSNYVVRMTLQFKTLPSGKTGAINKTYFLPHTSTTTALTNATDTKVEFYPASRYGYRGNKYVTDLK", + "protein_translation_length": 224, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010554" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45420" + ], + [ + "gene_synonym", + "ECK3206" + ], + [ + "gene_synonym", + "NP_417683.1" + ], + [ + "gene_synonym", + "GI:16131106" + ], + [ + "gene_synonym", + "b3216" + ], + [ + "gene_synonym", + "GeneID:947738" + ], + [ + "gene_synonym", + "JW3183" + ], + [ + "gene_synonym", + "EcoGene:EG12810" + ], + [ + "gene_synonym", + "yhcD" + ] + ], + "dna_sequence": "ATGTTAAAAAAAACGTTACTGGCCTACACCATTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCATTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAACAGCTGCGCTGCTAAACTACTCTCTGATGAGCAGCCGTGCAGAATTTTCTAATGGGAGTTCGGACTACTCCCAGGCTGCACTTGAAGGCGGGATTAATATTAATGACTGGATGTTACGCAGCCATCAGTTCCTTACACAAACAAATGGCACATTCAGTAACCAGAACTCGTCAACCTACCTTCAACGTACCTTTACAGATCTTAAAACACTCATGCGAGCAGGTGAAGTTAACCTCAATAATAGCGTGTTGGAAGGAGCCAGTATTTACGGTATCGAAATCGCACCGGACAACGCATTGCAAACCAGCGGCAGTGGTGTGCAAGTTACTGGTATAGCCAACACCTCTCAGGCTCGTGTCGAGATTCGTCAACAAGGAGTTTTAATTCATTCCATTCTGGTTCCTGCGGGCGCATTCACTATCCCTGATGTACCTGTTCGCAATGGTAATAGTGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTGGGTAATTAGTGCATCGAGCGGATGGAATCTGACACGCTGGAGTGCAATGAACGGCGGCGTTATCGTAGCAGAAAATTATCAGGCGGCATCAATCCGGTCGAGTCTGGTTCCCCTGCCCGATTTAACAGTGAGCAGCCAAATTAGTACATCGCAGGATACGAAAGACTCACTGCAAGGACAGAAATATCGTCTTGACGCGAACTACAATCTCCCATTTTCACTTGGGCTAACAACCAGCCTCACTCGATCTGATCGCCATTATCGCGAACTGTCTGAAGCGATTGATGATGATTATACCGATCCGACTAAAAGCACTTATGCGCTTGGTTTAAACTGGTCTAACTCCATTCTGGGTGGTTTCAACATCAGTGGCTATAAAACATATAGTTACGACGGTGACAATGACTCAAGCAACCTTAATATTAACTGGAACAAAGCGTTCAAACACGCCACGGTTTCCGTCAACTGGCAGCATCAACTTAGTGCTTCAGAAAATAATGAAGACGATGGTGATCTGTTCTACGTCAACATCAGTATTCCATTTGGCAGATCAAACACCGCCACACTGTATACTCGCCATGACGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGGGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATGATCAAACAAGGCCGTGGTGCAGTAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAAAGATGTGTTCTATGAGACAGCAACAGGAGAGTGCCAATGA", 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"UniProtKB/Swiss-Prot:P45421" + ], + [ + "gene_synonym", + "ASAP:ABE-0010556" + ], + [ + "gene_synonym", + "ECK3207" + ], + [ + "gene_synonym", + "JW3187" + ], + [ + "gene_synonym", + "GeneID:4056032" + ], + [ + "gene_synonym", + "ASAP:ABE-0285102" + ], + [ + "gene_synonym", + "JW3184" + ], + [ + "gene_synonym", + "EcoGene:EG12811" + ], + [ + "gene_synonym", + "yhcE" + ] + ], + "dna_sequence": "ATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTCCAACAACGGATTTGGATTTGGCCCGAATGGTTCATTAAATCTGATCGCCAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGTACTTCCCCCAATAATTGGCTGGTGTTTATGCAAAATGGTCAAGAAGTGGTAATTGATAGCGGTAAAAGCGTTAGCCTCACACTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGA", + "dna_sequence_length": 546, + "id": "CDS_3162", + "location": [ + [ + "NC_000913", + 3365185, + "+", + 367 + ], + [ + "NC_000913", + 3366751, + "+", + 179 + ] + ], + "md5": "5e13755129c14a0d526d212f62aea93a", + "parent_gene": "", + "protein_md5": "f0556894c4199c1157e8714f49ff9eb1", + "protein_translation": "MKRIITGCLLLNFAMAAQAECNISSSIQNIDYGKRSAAMRQVDRGKTTQLADRTITLVMQCDQDAHIRVQLNTANISNNGFGFGPNGSLNLIASDAFSGSNNLDLALASGKNDNPGSTGTASISTSPNNWLVFMQNGQEVVIDSGKSVSLTLTMAPAFKDEGELTDMTDITGNLTVLVEAK", + "protein_translation_length": 181, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG40008" + ], + [ + "gene_synonym", + "GeneID:947743" + ], + [ + "gene_synonym", + "ASAP:ABE-0010559" + ], + [ + "gene_synonym", + "insH1" + ], + [ + "gene_synonym", + "NP_417685.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE57" + ], + [ + "gene_synonym", + "ECK0261" + ], + [ + "gene_synonym", + "GI:16131108" + ], + [ + "gene_synonym", + "b3218" + ] + ], + "dna_sequence": 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[ + "NC_000913", + 3370350, + "-", + 876 + ] + ], + "md5": "2b3fda4755b24ae0def24e4635fa6fb7", + "parent_gene": "", + "protein_md5": "e53821ca4ede87a7a00588cae24a337d", + "protein_translation": "MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIASGRGIAAAAQGELAGADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQGEKL", + "protein_translation_length": 291, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010575" + ], + [ + "gene_synonym", + "b3223" + ], + [ + "gene_synonym", + "nanE" + ], + [ + "gene_synonym", + "GI:16131113" + ], + [ + "gene_synonym", + "ECK3212" + ], + [ + "gene_synonym", + "GeneID:947745" + ], + [ + "gene_synonym", + "yhcJ" + ], + [ + "gene_synonym", + "JW3192" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A761" + ], + [ + "gene_synonym", + "NP_417690.1" + ], + [ + "gene_synonym", + "EcoGene:EG12816" + ] + ], + "dna_sequence": "ATGTCGTTACTTGCACAACTGGATCAAAAAATCGCTGCTAACGGTGGCCTGATTGTCTCCTGCCAGCCGGTTCCGGACAGCCCGCTCGATAAACCCGAAATCGTCGCCGCCATGGCATTAGCGGCAGAACAGGCGGGCGCGGTTGCCATTCGCATTGAAGGTGTGGCAAATCTGCAAGCCACGCGTGCGGTGGTGAGCGTGCCGATTATTGGAATTGTGAAACGCGATCTGGAGGATTCTCCGGTACGCATCACGGCCTATATTGAAGATGTTGATGCGCTGGCGCAGGCGGGCGCGGACATTATCGCCATTGACGGCACCGACCGCCCGCGTCCGGTGCCTGTTGAAACGCTGCTGGCACGTATTCACCATCACGGTTTACTGGCGATGACCGACTGCTCAACGCCGGAAGACGGCCTGGCATGCCAAAAGCTGGGAGCCGAAATTATTGGCACTACGCTTTCTGGCTATACCACGCCTGAAACGCCAGAAGAGCCGGATCTGGCGCTGGTGAAAACGTTGAGCGACGCCGGATGTCGGGTGATTGCCGAAGGGCGTTACAACACGCCTGCTCAGGCGGCGGATGCGATGCGCCACGGCGCGTGGGCGGTGACGGTCGGTTCTGCAATCACGCGTCTTGAGCACATTTGTCAGTGGTACAACACAGCGATGAAAAAGGCGGTGCTATGA", + "dna_sequence_length": 690, + "functions": [ + "putative N-acetylmannosamine-6-P epimerase" + ], + "id": "CDS_3168", + "location": [ + [ + "NC_000913", + 3371036, + "-", + 690 + ] + ], + "md5": "09f7173484a2af133d50f076e5475345", + 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"ATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAAGCAGCGGCTACTTGATCGTCGATATTTATAATGAAATCCTGCGCATGCTGTCCAACCGCATTGCCGGATTGGGGCTGTCGATTATGGCGGTGGGCGGTTATGCCCGCTACATGGAGCGCATAGGGGCCAGTCGCGCGATGGTGAGCTTGTTAAGCCGCCCGTTAAAACTCATTCGCTCGCCGTATATTATTCTGTCGGCAACTTACGTCATCGGCCAAATCATGGCGCAGTTTATTACCAGCGCCTCCGGTCTGGGTATGTTGCTGATGGTCACCTTATTTCCGACGCTGGTGAGTCTGGGAGTAAGTCGTCTCTCTGCGGTGGCAGTTATCGCAACCACGATGTCCATTGAGTGGGGGATTCTGGAAACGAACTCCATTTTTGCTGCCCAGGTAGCGGGAATGAAAATTGCCACATACTTCTTCCACTACCAGCTTCCGGTCGCCTCTTGCGTCATTATCTCGGTGGCGATCTCCCACTTTTTCGTGCAACGCGCTTTTGACAAAAAAGATAAAAATATCAATCACGAACAGGCAGAGCAAAAAGCTCTCGATAATGTCCCGCCGCTCTATTACGCCATTTTACCTGTGATGCCGTTAATCCTGATGCTCGGCTCGCTGTTCCTCGCCCACGTCGGGCTGATGCAGTCAGAACTGCATCTGGTGGTGGTGATGTTACTGAGTTTGACTGTGACGATGTTTGTTGAGTTCTTCCGCAAGCATAACTTGCGCGAAACAATGGACGATGTGCAGGCGTTTTTTGACGGCATGGGTACGCAGTTTGCCAACGTGGTAACGCTGGTGGTCGCGGGTGAAATATTTGCGAAAGGCTTAACGACGATTGGCACTGTCGATGCGGTTATCAGGGGGGCGGAGCATTCTGGTCTGGGCGGTATTGGCGTGATGATTATTATGGCGCTGGTCATTGCCATTTGTGCCATTGTGATGGGCTCTGGCAATGCGCCGTTTATGTCATTTGCCAGTCTTATTCCGAATATCGCAGCCGGACTACATGTACCAGCGGTTGTAATGATTATGCCGATGCATTTTGCCACGACGCTAGCGCGCGCGGTTTCGCCGATTACTGCGGTGGTGGTCGTTACGTCAGGAATTGCAGGCGTTTCGCCTTTTGCGGTGGTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAA", 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], + [ + "gene_synonym", + "yhdQ" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46474" + ], + [ + "gene_synonym", + "JW5542" + ], + [ + "gene_synonym", + "GeneID:2847740" + ], + [ + "gene_synonym", + "yhdR" + ], + [ + "gene_synonym", + "ECK3234" + ], + [ + "gene_synonym", + "yhdP" + ], + [ + "gene_synonym", + "YP_026208.1" + ], + [ + "gene_synonym", + "GI:49176330" + ] + ], + "dna_sequence": "GTGAGGCGATTGCCGGGGATTTTACTGCTTACTGGAGCCGCGCTCGTTGTGATCGCTGCCCTGCTGGTTAGCGGCCTGCGTATTGCTTTACCGCATCTTGACGCCTGGCGTCCGGAAATCCTCAACAAAATAGAATCCGCGACTGGCATGCCGGTAGAAGCCAGTCAGCTCTCAGCCAGCTGGCAGAATTTTGGCCCGACGCTTGAAGCACACGACATCCGTGCAGAACTAAAAGATGGCGGCGAATTTTCGGTTAAACGCGTTACTCTGGCGCTGGATGTCTGGCAGAGCCTGTTACATATGCGCTGGCAGTTTCGCGACCTCACTTTCTGGCAGCTGCGCTTTCGCACCAACACTCCTATCACCAGCGGTGGTAGTGATGACAGTCTGGAAGCCAGTCACATCAGCGATCTGTTTCTTCGTCAATTTGACCATTTCGATCTTCGCGACAGTGAAGTCAGTTTCCTGACGCCATCCGGTCAGCGCGCCGAGCTGGCGATCCCACAACTCACCTGGCTGAACGATCCACGTCGACACCGTGCGGAAGGCCTGGTAAGCCTCTCCAGCCTTACCGGACAGCACGGCGTGATGCAGGTGCGCATGGATTTGCGCGATGATGAGGGGTTGTTAAGCAATGGTCGCGTCTGGCTCCAGGCGGATGACATCGACCTGAAGCCGTGGCTCGGTAAATGGATGCAGGACAATATTGCGCTGGAAACGGCACAGTTCTCCCTTGAAGGCTGGATGACGATCGACAAAGGCGATGTAACCGGCGGTGACGTCTGGCTGAAACAGGGCGGTGCCAGCTGGTTGGGCGAGAAGCAAACGCATACGCTGTCGGTGGATAATCTGACCGCGCATATTACGCGTGAAAATCCGGGCTGGCAGTTCTCTATTCCCGATACACGGATCACGATGGACGGCAAACCCTGGCCGAGCGGAGCATTGACGCTGGCCTGGATACCGGAACAGGACGTTGGCGGCAAAGACAATAAACGCAGTGACGAACTCCGGATTCGCGCCAGTAATCTGGAGCTGGCAGGCCTGGAGGGCATACGCCCGCTGGCCGCGAAACTTTCACCTGCACTGGGTGATGTTTGGCGCTCCACACAACCGAGCGGCAAGATTAACACTCTGGCGCTGGATATCCCGCTTCAGGCGGCAGACAAGACCCGTTTTCAGGCATCGTGGAGCGATCTGGCCTGGAAGCAATGGAAATTATTACCGGGTGCGGAACACTTCTCCGGGACGCTTTCCGGCAGCGTTGAAAATGGTTTGCTTACCGCGTCGATGAAGCAGGCAAAGATGCCTTACGAAACGGTATTCCGTGCGCCACTAGAAATCGCCGACGGCCAGGCAACTATAAGCTGGCTGAACAATAACAAAGGTTTCCAGCTGGATGGGCGTAATATTGACGTTAAAGCCAAAGCCGTCCATGCGCGCGGCGGTTTTCGTTACCTGCAACCTGCTAACGATGAACCCTGGCTGGGTATTCTGGCTGGCATCAGTACCGATGATGGTTCACAAGCCTGGCGCTATTTCCCGGAAAACTTGATGGGTAAAGACCTGGTTGATTACTTAAGTGGCGCGATTCAGGGCGGTGAAGCGGATAACGCGACGCTGGTTTATGGTGGCAATCCGCAACTCTTCCCCTATAAACACAACGAAGGTCAGTTTGAAGTGCTGGTGCCGCTGCGCAACGCGAAGTTTGCCTTCCAGCCGGACTGGCCTGCATTAACTAACCTTGATATTGAACTGGACTTTATTAACGACGGTTTATGGATGAAAACCGATGGCGTTAATCTGGGCGGCGTGCGCGCGAGTAATCTTACCGCAGTGATCCCTGACTACTCAAAAGAAAAACTGCTGATTGACGCTGACATTAAAGGTCCGGGTAAAGCCGTTGGCCCTTACTTTGATGAGACACCGCTGAAAGATTCTCTGGGTGCGACCCTGCAAGAACTCCAGCTCGACGGCGATGTGAATGCTCGCTTACATCTTGATATCCCGCTGAACGGCGAACTGGTAACCGCGAAAGGTGAAGTGACGCTGCGTAATAACAGTCTGTTTATCAAACCACTCGACAGCACCCTGAAAAATTTGAGCGGTAAATTCAGCTTTATCAATAGCGATCTGCAAAGTGAACCACTGACAGCAAGCTGGTTTAATCAGCCGTTGAACGTGGATTTTTCCACCAAAGAAGGGGCAAAAGCCTACCAGGTAGCGGTAAACCTCAACGGTAACTGGCAACCGGCGAAAACCGGCGTTCTGCCTGAAGCGGTGAACGAAGCATTGAGTGGCAGCGTGGCGTGGGATGGTAAAGTGGGCATTGATCTGCCTTATCATGCTGGTGCGACCTATAACATAGAGCTGAACGGCGATCTAAAGAATGTGAGCAGTCACTTACCTTCACCGTTAGCCAAACCTGCGGGTGAACCACTAGCGGTAAACGTTAAGGTTGATGGCAATCTCAACAGCTTTGAATTAACCGGACAGGCTGGTGCGGATAATCATTTCAATAGCCGCTGGTTGCTCGGTCAAAAGCTGACGCTCGATCGTGCTATTTGGGCGGCAGACAGTAAAACGCTCCCGCCGTTGCCGGAACAAAGTGGCGTTGAACTCAATATGCCGCCGATGAATGGTGCCGAGTGGCTGGCCCTGTTCCAGAAAGGCGCTGCGGAGAGTGTCGGTGGTGCAGCGAGTTTCCCACAACACATAACGTTACGTACGCCTATGTTGTCACTGGGAAATCAGCAATGGAATAACCTGAGTATTGTTTCGCAACCGACGGCAAATGGCACCCTGGTTGAAGCGCAAGGGCGTGAAATCAACGCCACGCTAGCGATGCGTAATAACGCGCCGTGGCTGGCGAATATCAAATATCTTTATTACAACCCGAGCGTGGCGAAAACTCGTGGTGATTCAACGCCGTCATCACCTTTCCCGACAACGGAGCGCATTAACTTCCGTGGCTGGCCGGACGCCCAAATACGATGCACAGAGTGCTGGTTCTGGGGGCAAAAATTCGGTCGCATTGACAGTGATATCACCATTTCTGGCGATACGTTAACGCTGACCAATGGACTGATTGATACTGGTTTCTCGCGGCTTACTGCCGATGGTGAATGGGTTAATAATCCGGGGAATGAACGTACCTCGCTGAAAGGAAAACTGCGCGGGCAGAAAATTGATGCCGCCGCAGAATTTTTTGGTGTCACGACGCCCATACGCCAGTCGTCATTTAATGTGGATTACGATTTACACTGGCGCAAAGCACCCTGGCAGCCAGATGAAGCGACGTTGAATGGCATCATTCATACTCAACTGGGTAAAGGCGAAATTACCGAAATCAATACCGGACATGCCGGGCAATTGCTGCGCTTATTGAGCGTAGATGCCCTGATGCGTAAGCTGCGTTTTGATTTCAGAGACACTTTTGGCGAAGGGTTCTATTTTGACTCCATTCGCAGCACCGCGTGGATTAAAGACGGCGTTATGCACACCGACGACACGCTGGTGGATGGCCTGGAGGCGGATATCGCCATGAAAGGGTCGGTAAATCTGGTACGTCGCGACCTGAATATGGAAGCGGTTGTCGCACCAGAGATTTCTGCGACGGTGGGCGTGGCTGCGGCTTTTGCGGTTAACCCCATTGTTGGCGCGGCAGTGTTTGCCGCCAGTAAAGTGCTGGGGCCGCTGTGGAGCAAAGTCTCCATTTTGCGCTATCACATTTCGGGTCCGCTGGACGATCCGCAAATCAACGAAGTGTTGCGCCAACCGCGTAAAGAAAAAGCGCAATGA", 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"MRRLPGILLLTGAALVVIAALLVSGLRIALPHLDAWRPEILNKIESATGMPVEASQLSASWQNFGPTLEAHDIRAELKDGGEFSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFSIPDTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRSDELRIRASNLELAGLEGIRPLAAKLSPALGDVWRSTQPSGKINTLALDIPLQAADKTRFQASWSDLAWKQWKLLPGAEHFSGTLSGSVENGLLTASMKQAKMPYETVFRAPLEIADGQATISWLNNNKGFQLDGRNIDVKAKAVHARGGFRYLQPANDEPWLGILAGISTDDGSQAWRYFPENLMGKDLVDYLSGAIQGGEADNATLVYGGNPQLFPYKHNEGQFEVLVPLRNAKFAFQPDWPALTNLDIELDFINDGLWMKTDGVNLGGVRASNLTAVIPDYSKEKLLIDADIKGPGKAVGPYFDETPLKDSLGATLQELQLDGDVNARLHLDIPLNGELVTAKGEVTLRNNSLFIKPLDSTLKNLSGKFSFINSDLQSEPLTASWFNQPLNVDFSTKEGAKAYQVAVNLNGNWQPAKTGVLPEAVNEALSGSVAWDGKVGIDLPYHAGATYNIELNGDLKNVSSHLPSPLAKPAGEPLAVNVKVDGNLNSFELTGQAGADNHFNSRWLLGQKLTLDRAIWAADSKTLPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAASFPQHITLRTPMLSLGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIKYLYYNPSVAKTRGDSTPSSPFPTTERINFRGWPDAQIRCTECWFWGQKFGRIDSDITISGDTLTLTNGLIDTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQSSFNVDYDLHWRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRFDFRDTFGEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVAPEISATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQPRKEKAQ", 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"ATGACGGCTGAATTGTTAGTAAACGTAACGCCTTCGGAAACGCGAGTGGCGTATATTGATGGCGGTATTCTGCAGGAAATTCATATTGAACGTGAGGCGCGACGCGGAATAGTAGGCAATATCTACAAGGGTCGTGTAAGTCGTGTACTTCCGGGTATGCAGGCGGCTTTTGTAGATATTGGGCTGGATAAAGCCGCGTTTCTTCATGCATCCGACATCATGCCGCACACCGAATGTGTGGCGGGTGAAGAACAAAAGCAATTCACGGTGCGCGACATCTCGGAACTGGTTCGTCAGGGGCAAGATCTGATGGTGCAGGTGGTGAAAGATCCGCTTGGCACTAAAGGTGCGCGCCTGACCACCGATATCACGCTCCCTTCTCGCTATCTGGTGTTTATGCCAGGGGCTTCTCACGTTGGGGTTTCCCAACGTATTGAAAGCGAATCAGAACGTGAACGCCTGAAAAAAGTGGTCGCAGAGTATTGCGACGAGCAGGGCGGGTTTATCATCCGTACCGCAGCGGAAGGGGTTGGCGAGGCTGAACTGGCCTCCGATGCCGCTTATCTGAAACGCGTCTGGACCAAAGTTATGGAGCGTAAAAAACGCCCGCAGACCCGTTATCAGCTGTACGGCGAACTGGCGCTGGCGCAGCGTGTTCTGCGTGATTTCGCCGATGCCGAACTGGACCGCATTCGCGTTGACTCACGCCTGACTTACGAAGCGTTACTTGAGTTCACCTCGGAGTACATTCCCGAGATGACAAGCAAGCTGGAGCATTACACAGGACGCCAGCCGATTTTCGATCTCTTTGATGTCGAAAACGAAATCCAGCGAGCGCTGGAACGCAAAGTAGAACTGAAATCCGGTGGTTATCTCATTATCGACCAGACCGAAGCGATGACCACCGTGGACATCAATACCGGAGCGTTTGTCGGTCATCGCAATCTGGACGACACCATTTTCAATACCAATATTGAAGCGACGCAGGCTATCGCTCGCCAGTTACGGTTGCGTAATCTGGGCGGGATTATCATTATTGATTTCATCGATATGAATAATGAAGATCACCGCCGCCGAGTGCTGCACTCGCTGGAGCAGGCGTTGAGCAAAGACCGGGTGAAAACCAGCGTTAATGGTTTTTCGGCGCTGGGGCTGGTGGAGATGACGCGTAAACGCACCCGCGAAAGCATTGAGCACGTACTGTGTAACGAATGCCCAACCTGCCACGGTCGCGGAACGGTGAAAACCGTGGAAACGGTATGCTATGAAATCATGCGCGAGATTGTTCGTGTCCACCATGCTTACGACTCCGACCGTTTCCTGGTCTATGCTTCTCCGGCAGTAGCTGAAGCCTTGAAAGGCGAAGAGTCACACTCGCTGGCGGAAGTGGAAATTTTCGTTGGCAAACAGGTTAAAGTACAAATTGAACCGCTCTATAACCAGGAGCAGTTTGACGTCGTAATGATGTAA", 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"yhdE" + ], + [ + "gene_synonym", + "GeneID:947753" + ], + [ + "gene_synonym", + "ECK3236" + ], + [ + "gene_synonym", + "NP_417714.1" + ], + [ + "gene_synonym", + "maf" + ], + [ + "gene_synonym", + "GI:16131136" + ], + [ + "gene_synonym", + "JW3217" + ], + [ + "gene_synonym", + "EcoGene:EG11298" + ], + [ + "gene_synonym", + "ASAP:ABE-0010653" + ] + ], + "dna_sequence": "ATGACTTCTCTGTATTTAGCTTCCGGTTCTCCGCGTCGTCAGGAGTTACTTGCGCAACTTGGCGTGACCTTTGAACGTATTGTTACGGGCATTGAGGAGCAGCGTCAGCCGCAGGAGAGCGCGCAGCAGTATGTTGTGCGTCTGGCGCGCGAGAAAGCACGGGCAGGTGTCGCGCAAACGGCGAAGGATCTCCCGGTGCTGGGTGCGGATACTATCGTTATCCTGAACGGAGAAGTGCTGGAGAAACCGCGCGACGCAGAGCATGCGGCGCAGATGTTGCGCAAATTATCGGGTCAGACCCATCAGGTGATGACAGCAGTGGCGTTGGCCGACAGCCAGCACATTCTCGATTGCCTGGTGGTCACCGATGTGACTTTCAGAACGTTAACAGACGAAGACATCGCGGGCTATGTCGCCAGCGATGAACCGTTAGATAAAGCAGGTGCATACGGTATTCAGGGGCTGGGTGGCTGTTTTGTCAGGAAGATAAATGGCAGCTATCACGCCGTAGTCGGCTTACCGCTGGTTGAAACGTATGAATTATTAAGTAATTTTAACGCACTGCGTGAGAAAAGGGATAAACATGACGGCTGA", + "dna_sequence_length": 594, + "functions": [ + "dTTP/UTP pyrophosphatase", + "m(5)UTP/m(5)CTP/pseudo-UTP pyrophosphatase" + ], + "id": "CDS_3192", + "location": [ + [ + "NC_000913", + 3398378, + "-", + 594 + ] + ], + "md5": "9dbcf58615b6aaf64cd154f04a10254a", + "parent_gene": "", + "protein_md5": "388c1f1c8f32ff750b138a39fd86c3d7", + "protein_translation": "MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKARAGVAQTAKDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLVVTDVTFRTLTDEDIAGYVASDEPLDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG", + "protein_translation_length": 197, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b3249" + ], + [ + "gene_synonym", + "EcoGene:EG10610" + ], + [ + "gene_synonym", + "mreD" + ], + [ + "gene_synonym", + "GeneID:947756" + ], + [ + "gene_synonym", + "ECK3237" + ], + [ + "gene_synonym", + "JW3218" + ], + [ + "gene_synonym", + "NP_417715.1" + ], + [ + "gene_synonym", + "GI:16131137" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABH4" + ], + [ + "gene_synonym", + "ASAP:ABE-0010656" + ] + ], + "dna_sequence": "GTGGCGAGCTATCGTAGCCAGGGACGCTGGGTAATCTGGCTCTCTTTCCTCATTGCGCTGTTGCTGCAAATCATGCCCTGGCCGGATAACCTGATTGTTTTCCGGCCAAACTGGGTGTTACTCATCTTGTTGTATTGGATCCTGGCCTTGCCTCATCGCGTAAATGTGGGCACAGGTTTTGTGATGGGTGCCATACTGGATCTGATCAGCGGCTCGACGCTTGGCGTACGCGTATTGGCGATGAGCATCATTGCTTACCTGGTGGCGCTGAAATACCAGCTTTTCCGCAACCTCGCATTATGGCAGCAGGCGCTGGTCGTCATGTTGCTTTCGCTGGTGGTGGATATTATTGTTTTCTGGGCAGAGTTTTTAGTGATTAACGTCTCTTTCAGACCGGAAGTGTTCTGGAGTAGTGTAGTCAATGGGGTGCTCTGGCCGTGGATTTTCTTGCTGATGCGCAAAGTCCGTCAGCAGTTTGCAGTGCAATAA", + "dna_sequence_length": 489, + "functions": [ + "cell wall structural complex MreBCD transmembrane component MreD" + ], + "id": "CDS_3193", + "location": [ + [ + "NC_000913", + 3398875, + "-", + 489 + ] + ], + "md5": "b8482cc7f0788c87474d4990e72d8a05", + "parent_gene": "", + "protein_md5": "80e07c188c1bb10742350560cbb3a770", + "protein_translation": "MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:947655" + ], + [ + "gene_synonym", + "b3250" + ], + [ + "gene_synonym", + "EcoGene:EG10609" + ], + [ + "gene_synonym", + "mreC" + ], + [ + "gene_synonym", + "JW3219" + ], + [ + "gene_synonym", + "NP_417716.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0010658" + ], + [ + "gene_synonym", + "GI:16131138" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16926" + ], + [ + "gene_synonym", + "ECK3238" + ] + ], + "dna_sequence": "ATGAAGCCAATTTTTAGCCGTGGCCCGTCGCTACAGATTCGCCTTATTCTGGCGGTGCTGGTGGCGCTCGGCATTATTATTGCCGACAGCCGCCTGGGGACGTTCAGTCAAATCCGTACTTATATGGATACCGCCGTCAGTCCTTTCTACTTTGTTTCCAATGCTCCTCGTGAATTGCTGGATGGCGTATCGCAGACGCTGGCCTCGCGTGACCAATTAGAACTTGAAAACCGGGCGTTACGTCAGGAACTGTTGCTGAAAAACAGTGAACTGCTGATGCTTGGACAATACAAACAGGAGAACGCGCGTCTGCGCGAGCTGCTGGGTTCCCCGCTGCGTCAGGATGAGCAGAAAATGGTGACTCAGGTTATCTCCACGGTTAACGATCCTTATAGCGATCAAGTTGTTATCGATAAAGGTAGCGTTAATGGCGTTTATGAAGGCCAGCCGGTCATCAGCGACAAAGGTGTTGTTGGTCAGGTGGTGGCCGTCGCTAAACTGACCAGTCGCGTGCTGCTGATTTGTGATGCGACCCACGCGCTGCCAATCCAGGTGCTGCGCAACGATATCCGCGTAATTGCAGCCGGTAACGGTTGTACGGATGATTTGCAGCTTGAGCATCTGCCGGCGAATACGGATATTCGTGTTGGTGATGTGCTGGTGACTTCCGGTCTGGGCGGTCGTTTCCCGGAAGGCTATCCGGTCGCGGTTGTCTCTTCCGTAAAACTCGATACCCAGCGCGCTTATACTGTGATTCAGGCGCGTCCGACTGCAGGGCTGCAACGTTTGCGTTATCTGCTGCTGCTGTGGGGGGCAGATCGTAACGGCGCTAACCCGATGACGCCGGAAGAGGTGCATCGTGTTGCTAATGAACGTCTGATGCAGATGATGCCGCAGGTATTGCCTTCGCCAGACGCGATGGGGCCAAAGTTACCTGAACCGGCAACGGGGATCGCTCAGCCGACTCCGCAGCAACCGGCGACAGGAAATGCAGCTACTGCGCCTGCTGCGCCGACACAGCCTGCTGCTAATCGCTCTCCACAAAGGGCTACGCCGCCGCAAAGTGGTGCTCAACCGCCTGCGCGTGCGCCGGGAGGGCAATAG", 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"NP_417717.2" + ], + [ + "gene_synonym", + "EcoGene:EG10608" + ], + [ + "gene_synonym", + "mreB" + ], + [ + "gene_synonym", + "rodY" + ], + [ + "gene_synonym", + "JW3220" + ], + [ + "gene_synonym", + "mon" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9X4" + ], + [ + "gene_synonym", + "envB" + ], + [ + "gene_synonym", + "ECK3239" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0010675" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABD8" + ], + [ + "gene_synonym", + "NP_417721.1" + ], + [ + "gene_synonym", + "accB" + ], + [ + "gene_synonym", + "fabE" + ], + [ + "gene_synonym", + "ECK3242" + ], + [ + "gene_synonym", + "GI:16131143" + ], + [ + "gene_synonym", + "EcoGene:EG10275" + ] + ], + "dna_sequence": "ATGGATATTCGTAAGATTAAAAAACTGATCGAGCTGGTTGAAGAATCAGGCATCTCCGAACTGGAAATTTCTGAAGGCGAAGAGTCAGTACGCATTAGCCGTGCAGCTCCTGCCGCAAGTTTCCCTGTGATGCAACAAGCTTACGCTGCACCAATGATGCAGCAGCCAGCTCAATCTAACGCAGCCGCTCCGGCGACCGTTCCTTCCATGGAAGCGCCAGCAGCAGCGGAAATCAGTGGTCACATCGTACGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGATACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTGGACAACCGGTAGAATTTGACGAGCCGCTGGTCGTCATCGAGTAA", + "dna_sequence_length": 471, + "functions": [ + "acetyl CoA carboxylase, BCCP subunit" + ], + "id": "CDS_3200", + "location": [ + [ + "NC_000913", + 3405436, 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"ATGACGAAACATGCCAGGTTTTTCCTCCTGCCCTCCTTTATTCTGATCTCCGCGGCTTTAATCGCCGGTTGTAACGATAAGGGAGAAGAGAAAGCTCACGTCGGTGAACCGCAGGTTACCGTTCATATTGTAAAAACGGCCCCGTTAGAAGTTAAGACTGAATTACCAGGCCGCACCAATGCTTATCGTATAGCCGAAGTTCGCCCACAGGTTAGCGGGATCGTACTGAATCGCAATTTCACTGAAGGCAGCGATGTGCAAGCAGGCCAGTCCCTGTACCAGATCGATCCCGCGACCTATCAGGCAAATTATGACAGCGCGAAAGGCGAACTGGCGAAAAGTGAAGCCGCCGCCGCCATCGCGCATTTGACGGTAAAACGTTACGTTCCGCTCGTGGGTACGAAATACATCAGCCAGCAGGAGTACGACCAGGCCATTGCTGATGCTCGTCAGGCCGATGCCGCCGTGATTGCCGCAAAAGCCACAGTCGAAAGCGCTCGCATCAATCTTGCTTATACCAAAGTCACTGCGCCAATTAGCGGACGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCTACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACGCCACCAGCAACGTAGAGTTGGTCATGGAAAACGGTCAAACCTATCCCCTGAAAGGTACGCTGCAATTCTCCGATGTGACCGTTGATGAAAGCACCGGCTCCATAACCCTACGTGCTGTCTTCCCTAACCCGCAACATACGCTTTTGCCGGGTATGTTTGTGCGTGCACGGATTGATGAAGGCGTCCAACCTGACGCCATTCTTATCCCGCAACAAGGCGTTAGCCGCACACCGCGTGGTGATGCAACCGTGCTGATTGTTAACGATAAAAGTCAGGTTGAAGCGCGCCCTGTCGTTGCCAGTCAGGCGATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAA", + "dna_sequence_length": 1158, + "functions": [ + "cytoplasmic membrane lipoprotein" + ], + "id": "CDS_3210", + "location": [ + [ + "NC_000913", + 3413864, + "+", + 1158 + ] + ], + "md5": "03dde278326822c02a0bb742cf0a839f", + "parent_gene": "", + "protein_md5": "01051bed14d6f4398c6990af584e887e", + "protein_translation": "MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVTVHIVKTAPLEVKTELPGRTNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQANYDSAKGELAKSEAAAAIAHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAKATVESARINLAYTKVTAPISGRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQSSNDFMRLKQSVEQGNLHKENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLRAVFPNPQHTLLPGMFVRARIDEGVQPDAILIPQQGVSRTPRGDATVLIVNDKSQVEARPVVASQAIGDKWLISEGLKSGDQVIVSGLQKARPGEQVKATTDTPADTASK", + "protein_translation_length": 385, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b3266" + ], + [ + "gene_synonym", + "GI:16131154" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24181" + ], + [ + "gene_synonym", + "GeneID:947768" + ], + [ + "gene_synonym", + "NP_417732.1" + ], + [ + "gene_synonym", + "ECK3253" + ], + [ + "gene_synonym", + "acrF" + ], + [ + "gene_synonym", + "JW3234" + ], + [ + "gene_synonym", + "ASAP:ABE-0010724" + ], + [ + "gene_synonym", + "EcoGene:EG10267" + ], + [ + "gene_synonym", + "envD" + ] + ], + "dna_sequence": "ATGGCAAACTTTTTTATTCGACGACCGATATTTGCATGGGTGCTGGCCATTATTCTGATGATGGCGGGCGCACTGGCGATCCTACAATTGCCCGTCGCTCAGTATCCAACAATTGCACCGCCTGCGGTTTCTGTTTCAGCAAACTATCCGGGCGCTGATGCGCAGACCGTGCAGGATACGGTGACGCAGGTTATCGAACAGAATATGAACGGTATCGATAACCTGATGTATATGTCCTCCACCAGCGATTCCGCCGGTAGCGTGACAATTACCCTTACCTTCCAGTCCGGGACCGATCCTGATATCGCGCAAGTGCAGGTGCAGAACAAACTCCAGCTCGCCACGCCGTTGCTGCCGCAGGAGGTTCAGCAGCAGGGGATCAGTGTTGAAAAGTCCAGTAGCAGCTATTTGATGGTGGCGGGCTTTGTCTCTGATAACCCAGGCACCACACAGGACGATATCTCGGACTATGTGGCCTCTAACGTTAAAGATACGCTTAGCCGTCTGAATGGCGTCGGTGACGTACAGCTTTTCGGCGCACAGTATGCGATGCGTATCTGGCTGGATGCCGATCTGCTAAACAAATATAAACTGACACCGGTTGATGTGATTAACCAGTTGAAGGTACAGAACGATCAGATCGCTGCCGGACAGTTGGGCGGAACGCCAGCGTTACCAGGGCAACAATTGAACGCCTCGATTATTGCTCAGACGCGGTTTAAAAATCCGGAAGAATTCGGCAAAGTGACCCTGCGCGTAAACAGTGACGGCTCGGTGGTACGCCTGAAAGATGTCGCACGGGTTGAACTTGGCGGTGAAAACTATAACGTTATCGCTCGTATCAACGGAAAACCGGCGGCGGGCCTGGGGATTAAGCTGGCAACCGGCGCGAATGCTCTCGATACCGCGAAAGCCATTAAGGCAAAACTGGCGGAATTACAGCCATTCTTCCCGCAGGGAATGAAGGTTCTCTACCCTTATGACACCACGCCATTCGTCCAGCTTTCTATTCACGAAGTGGTAAAAACGCTGTTCGAAGCCATTATGCTGGTGTTCCTGGTGATGTATCTGTTCTTGCAGAATATGCGAGCAACGCTGATCCCCACCATTGCGGTACCCGTGGTGTTGTTAGGGACGTTTGCCATCCTCGCCGCTTTTGGTTACTCCATCAACACACTAACGATGTTCGGGATGGTGCTTGCCATCGGGCTGCTCGTCGATGATGCGATAGTGGTGGTGGAGAACGTCGAGCGCGTGATGATGGAGGATAAGCTCCCGCCAAAAGAAGCGACGGAAAAATCGATGTCGCAAATTCAGGGCGCACTGGTGGGTATCGCGATGGTGCTGTCAGCGGTATTTATTCCGATGGCATTCTTCGGCGGTTCTACTGGGGCAATTTATCGCCAGTTCTCTATCACCATCGTTTCGGCAATGGCGCTTTCTGTTCTGGTGGCATTGATTCTTACCCCTGCGTTATGTGCAACGCTGCTTAAACCCGTCTCTGCTGAGCATCACGAAAATAAGGGCGGTTTCTTCGGTTGGTTTAATACCACCTTCGATCATAGCGTTAACCACTACACCAACAGCGTCGGCAAAATCCTCGGATCCACAGGACGATATTTACTGATCTATGCGCTGATTGTTGCAGGAATGGTGGTGTTGTTTTTACGTCTTCCGTCTTCCTTCTTACCTGAAGAGGATCAGGGTGTCTTTCTGACCATGATTCAGTTACCCGCTGGCGCGACGCAAGAGCGGACGCAAAAAGTGTTGGATCAAGTTACGGATTACTATCTGAAGAACGAGAAAGCGAACGTTGAAAGTGTCTTTACGGTTAACGGCTTTAGCTTCAGCGGCCAGGCACAAAACGCCGGTATGGCCTTCGTCAGTCTGAAACCGTGGGAAGAGCGTAATGGTGACGAAAACAGTGCGGAAGCGGTAATCCATCGTGCCAAAATGGAATTGGGCAAGATCCGCGACGGTTTTGTCATTCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATGCCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACACCGCGCAGTTTAAACTGGAAGTTGACCAGGAAAAGGCGCAGGCATTAGGTGTTTCACTTTCTGACATCAATCAGACCATTTCAACGGCGCTGGGTGGGACTTACGTTAACGACTTCATCGACCGTGGCCGCGTGAAAAAGTTGTATGTTCAGGCGGATGCCAAATTCCGTATGCTGCCAGAAGATGTCGATAAACTTTATGTCCGCAGCGCCAACGGCGAAATGGTGCCATTCTCGGCCTTTACCACTTCACATTGGGTGTATGGCTCTCCGCGACTGGAACGCTACAACGGTCTGCCGTCAATGGAGATTCAGGGGGAAGCCGCGCCAGGAACCAGTTCCGGCGATGCCATGGCGTTGATGGAAAACCTTGCGTCAAAATTACCTGCGGGCATTGGTTATGACTGGACGGGTATGTCGTATCAGGAACGCTTATCGGGAAACCAGGCTCCCGCTCTGGTAGCAATTTCCTTTGTGGTTGTTTTCCTGTGCCTTGCTGCACTCTATGAAAGCTGGTCAATTCCTGTCTCGGTTATGTTGGTAGTGCCGTTAGGGATTGTCGGCGTGCTGCTGGCGGCGACACTCTTTAATCAAAAAAATGACGTCTACTTTATGGTGGGCTTGCTAACGACAATTGGCTTGTCGGCCAAAAACGCTATTTTGATCGTTGAGTTCGCTAAAGATCTCATGGAGAAAGAGGGTAAAGGTGTTGTTGAAGCGACACTGATGGCAGTACGTATGCGTCTGCGTCCTATCCTGATGACCTCTCTCGCCTTTATTCTCGGCGTATTACCGCTAGCTATCAGTAACGGTGCCGGCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGATAA", + "dna_sequence_length": 3105, + "functions": [ + "multidrug efflux system protein" + ], + "id": "CDS_3211", + "location": [ + [ + "NC_000913", + 3415033, + "+", + 3105 + ] + ], + "md5": "5d629896f78627284f4fd8383e5eed78", + "parent_gene": "", + "protein_md5": "f5fa0d339f2f184eefd443a5e880232a", + "protein_translation": "MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVSVSANYPGADAQTVQDTVTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDIAQVQVQNKLQLATPLLPQEVQQQGISVEKSSSSYLMVAGFVSDNPGTTQDDISDYVASNVKDTLSRLNGVGDVQLFGAQYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQLGGTPALPGQQLNASIIAQTRFKNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYNVIARINGKPAAGLGIKLATGANALDTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQLSIHEVVKTLFEAIMLVFLVMYLFLQNMRATLIPTIAVPVVLLGTFAILAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMMEDKLPPKEATEKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATLLKPVSAEHHENKGGFFGWFNTTFDHSVNHYTNSVGKILGSTGRYLLIYALIVAGMVVLFLRLPSSFLPEEDQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKNEKANVESVFTVNGFSFSGQAQNAGMAFVSLKPWEERNGDENSAEAVIHRAKMELGKIRDGFVIPFNMPAIVELGTATGFDFELIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGLEDTAQFKLEVDQEKAQALGVSLSDINQTISTALGGTYVNDFIDRGRVKKLYVQADAKFRMLPEDVDKLYVRSANGEMVPFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAMALMENLASKLPAGIGYDWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSVMLVVPLGIVGVLLAATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVVEATLMAVRMRLRPILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFFVPVFFVVIRRCFKG", + "protein_translation_length": 1034, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_417733.1" + ], + [ + "gene_synonym", + "b3267" + ], + [ + "gene_synonym", + "GeneID:947767" + ], + [ + "gene_synonym", + "EcoGene:EG12833" + ], + [ + "gene_synonym", + "ASAP:ABE-0010728" + ], + [ + "gene_synonym", + "ECK3254" + ], + [ + "gene_synonym", + "yhdV" + ], + [ + "gene_synonym", + "JW3235" + ], + [ + "gene_synonym", + "GI:16131155" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64622" + ] + ], + "dna_sequence": "ATGAAAAGATTAATTCCTGTGGCATTGCTCACCGCATTGCTGGCGGGCTGTGCTCACGATTCGCCCTGCGTTCCGGTTTATGACGATCAGGGTCGTCTGGTTCACACCAATACCTGTATGAAAGGCACGACTCAGGATAACTGGGAAACGGCTGGGGCTATTGCCGGCGGGGCAGCTGCTGTTGCTGGCCTGACGATGGGGATCATCGCTCTATCGAAATAA", + "dna_sequence_length": 222, + "functions": [ + "putative outer membrane protein" + ], + "id": "CDS_3212", + "location": [ + [ + "NC_000913", + 3418390, + "+", + 222 + ] + ], + "md5": "c6894cafa9068f849b58b01a946840a4", + "parent_gene": "", + "protein_md5": "8a1c0a537e4d96325b599a8f31971dc6", + "protein_translation": "MKRLIPVALLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAAVAGLTMGIIALSK", + "protein_translation_length": 73, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:947766" + ], + [ + "gene_synonym", + "ASAP:ABE-0010731" + ], + [ + "gene_synonym", + "EcoGene:EG12834" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45766" + ], + [ + "gene_synonym", + "b3268" + ], + [ + "gene_synonym", + "yhdW" + ], + [ + "gene_synonym", + "ECK3255" + ], + [ + "gene_synonym", + "JW3236" + ] + ], + "dna_sequence": "ATGAAAAAGATGATGATAGCCACACTGGCTGCCGCCAGCGTGCTGCTTGCCGTTGCAAATCAGGCGGCTGCTGGCGCGACGCTTGATGCCGTTCAGAAAAAAGGTTTTGTGCAATGCGGGATCAGTGATGGATTACCTGGGTTCTCTTATGCCGATGCTGACGGTAAGTTTTCAGGTATTGATGTTGATATTTGTCGTGGTGTTGCCGCTGCTGTATTTGGTGACGACACGAAAGTGAAATATACCCCGCTCACTGCAAAAGAACGCTTCACCGCTTTACAGTCAGGGGAGGTGGATTTGCTCTCCCGTAATACGACCTGGACTTCATCTCGCGATGCCGGGATGGGAATGGCATTTACCGGCGTCACTTATTACGACGGCATTGGCTTCCTGACGCACGATAAAGCGGGGCTAAAAAGCGCGAAAGAACTGGATGGCGCTACCGTCTGTATTCAGGCGGGTACTGATACCGAACTCAACGTCGCCGACTACTTCAAGGCAAACAATATGAAGTACACACCGGTGACTTTCGATCGCTCTGACGAATCAGCGAAGGCACTGGAATCTGGTCGCTGCGATACGCTGGCCTCGGATCAATCACAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAA", + "dna_sequence_length": 1026, + "id": "CDS_3213", + "location": [ + [ + "NC_000913", + 3419042, + "+", + 66 + ], + [ + "NC_000913", + 3419107, + "+", + 960 + ] + ], + "md5": "7d641a9d0fe4360ee224f5968090587a", + "parent_gene": "", + "protein_md5": "3417c2ed076970fa0b84ae9d3b83cb68", + "protein_translation": "MKKMMIATLAAASVLLAVANQAAAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR", + "protein_translation_length": 341, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010733" + ], + [ + "gene_synonym", + "GeneID:947765" + ], + [ + "gene_synonym", + "EcoGene:EG12835" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45767" + ], + [ + "gene_synonym", + "JW5544" + ], + [ + "gene_synonym", + "b3269" + ], + [ + "gene_synonym", + "YP_026209.1" + ], + [ + "gene_synonym", + "ECK3256" + ], + [ + "gene_synonym", + "GI:49176333" + ], + [ + "gene_synonym", + "yhdX" + ] + ], + "dna_sequence": "ATGTCTCATCGCCGCTCAACCGTTAAAGGCTCACTCTCTTTTGCCAACCCTACGGTTCGCGCCTGGTTATTCCAGATCCTTGCCGTTGTTGCTGTTGTCGGCATTGTTGGTTGGTTATTTCACAACACTGTAACGAATCTCAATAATCGTGGCATTACTTCAGGTTTTGCCTTTCTGGATCGCGGCGCTGGCTTCGGTATTGTCCAGCATTTGATCGATTACCAGCAGGGCGACACCTACGGACGCGTTTTTATTGTCGGCTTACTCAATACGCTACTGGTTTCTGCATTGTGTATTGTGTTCGCTTCTGTTTTGGGCTTCTTTATCGGTCTGGCGAGACTTTCGGATAACTGGCTGCTACGAAAGCTTTCCACAATTTATATTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTGGGAGACGGATTTATTGCGTTTATCCTGGCTGTTGTTATGGCTATAGTCCTTTCTGTTGGGCTATTCCGCTTTAATAAAACATACCAGATAAAGACCGGACAACTGCGCCGCACCTGGCCGATCGCCGCAGTGTTGATCATTGGTTTGCCTTTACTGGCGCAATGGCTTTTTGGCGCAGCACTACACTGGGATGTCCCAGCCCTACGAGGCTTTAACTTCCGCGGCGGGATGGTTTTAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCAGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCATTGCGGGTGATTATTCCACCGTTAACCAGCCAGTATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCATCGCGATCGTTGAACGCTAA", + "dna_sequence_length": 1182, + "functions": [ + "putative amino acid ABC transporter permease" + ], + "id": "CDS_3214", + "location": [ + [ + "NC_000913", + 3420134, + "+", + 1182 + ] + ], + "md5": "5cfa1d7eace7b8b3a3ab09428c010c3b", + "parent_gene": "", + "protein_md5": "d5fcfc167d949c2649ded980735916c2", + "protein_translation": "MSHRRSTVKGSLSFANPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRIAIVER", + "protein_translation_length": 393, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010736" + ], + [ + "gene_synonym", + "GI:90111567" + ], + [ + "gene_synonym", + "GeneID:947764" + ], + [ + "gene_synonym", + "b3270" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45768" + ], + [ + "gene_synonym", + "JW5545" + ], + [ + "gene_synonym", + "NP_417736.2" + ], + [ + "gene_synonym", + "ECK3257" + ], + [ + "gene_synonym", + "yhdY" + ], + [ + "gene_synonym", + "EcoGene:EG12836" + ] + ], + "dna_sequence": "ATGACAAAAGTATTGCTGTCTCATCCCCCGCGCCCGGCGAGCCATAACTCAAGCCGCGCGATGGTGTGGGTGCGAAAAAATCTGTTCTCCAGCTGGAGCAATAGCCTGCTGACTATTGGCTGCATATGGTTGATGTGGGAACTGATCCCACCGTTGCTGAACTGGGCATTTTTGCAGGCTAACTGGGTTGGCTCAACGCGTGCCGACTGCACAAAAGCCGGTGCCTGTTGGGTCTTCATCCACGAACGATTTGGTCAGTTTATGTATGGGCTTTACCCACACGACCAACGCTGGCGAATTAACCTCGCATTACTGATTGGGCTTGTGTCGATCGCACCAATGTTCTGGAAAATACTCCCGCATCGCGGTCGCTATATTGCGGCCTGGGCGGTGATTTACCCACTGATTGTCTGGTGGCTGATGTATGGCGGTTTTTTTGCTCTTGAGCGGGTTGAAACCCGGCAATGGGGCGGGCTGACGCTAACTTTAATTATTGCATCAGTTGGGATTGCGGGGGCGCTACCGTGGGGGATCTTACTGGCGTTAGGTCGCCGCTCCCATATGCCGATTGTGCGTATCTTATCGGTCATTTTTATCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGCGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAACTCAGGGGCTGGTTATTCTGCCACAGGCGTTGAAGCTGGTAATTCCTGGGCTGGTAAATACCATCATCGCACTCTTCAAAGATACCAGCCTGGTGATCATTATCGGGTTGTTCGATCTTTTCAGTAGCGTTCAGCAGGCAACCGTTGATCCCGCCTGGTTGGGTATGTCGACGGAAGGGTATGTTTTCGCCGCGCTGATCTACTGGATCTTCTGTTTCAGCATGTCGCGCTATAGCCAGTATCTGGAAAAACGTTTTAACACCGGGCGTACACCGCATTGA", 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"NP_417737.1" + ], + [ + "gene_synonym", + "EcoGene:EG12837" + ], + [ + "gene_synonym", + "ASAP:ABE-0010738" + ], + [ + "gene_synonym", + "JW3239" + ], + [ + "gene_synonym", + "ECK3258" + ], + [ + "gene_synonym", + "yhdZ" + ] + ], + "dna_sequence": 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"EcoGene:EG10867" + ], + [ + "gene_synonym", + "GeneID:947818" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60723" + ], + [ + "gene_synonym", + "eryA" + ], + [ + "gene_synonym", + "ECK3306" + ], + [ + "gene_synonym", + "rplD" + ], + [ + "gene_synonym", + "NP_417778.1" + ] + ], + "dna_sequence": "ATGGAATTAGTATTGAAAGACGCGCAGAGCGCGCTGACTGTTTCCGAAACTACCTTCGGTCGTGATTTCAACGAAGCGCTGGTTCACCAGGTTGTTGTTGCTTATGCAGCTGGTGCTCGTCAGGGTACTCGTGCTCAGAAGACTCGTGCTGAAGTAACTGGTTCCGGTAAAAAACCGTGGCGCCAGAAAGGCACCGGCCGTGCGCGTTCTGGTTCTATCAAGAGCCCGATCTGGCGTTCTGGTGGCGTGACCTTTGCTGCTCGTCCGCAGGACCACAGTCAAAAAGTTAACAAGAAGATGTACCGCGGCGCGCTGAAAAGCATCCTGTCCGAACTGGTACGTCAGGATCGTCTGATCGTTGTCGAGAAGTTCTCTGTAGAAGCGCCGAAAACTAAGCTGCTGGCACAGAAACTGAAAGACATGGCTCTGGAAGATGTGCTGATCATCACCGGTGAGCTGGACGAAAACCTGTTCCTGGCTGCGCGCAACCTGCACAAGGTTGACGTACGCGATGCAACTGGTATCGACCCGGTTAGCCTGATCGCCTTCGACAAAGTCGTAATGACTGCTGATGCTGTTAAGCAAGTTGAGGAGATGCTGGCATGA", + "dna_sequence_length": 606, + "functions": [ + "50S ribosomal subunit protein L4" + 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"MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA", + "protein_translation_length": 209, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG10909" + ], + [ + "gene_synonym", + "GeneID:947816" + ], + [ + "gene_synonym", + "b3321" + ], + [ + "gene_synonym", + "JW3283" + ], + [ + "gene_synonym", + "ASAP:ABE-0010862" + ], + [ + "gene_synonym", + "nusE" + ], + [ + "gene_synonym", + "rpsJ" + ], + [ + "gene_synonym", + "GI:16131200" + ], + [ + "gene_synonym", + "NP_417780.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7R5" + ], + [ + "gene_synonym", + "ECK3308" + ] + ], + "dna_sequence": 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"GI:16131201" + ], + [ + "gene_synonym", + "ASAP:ABE-0010865" + ], + [ + "gene_synonym", + "NP_417781.1" + ], + [ + "gene_synonym", + "b3322" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03825" + ], + [ + "gene_synonym", + "EcoGene:EG11263" + ], + [ + "gene_synonym", + "GeneID:947826" + ], + [ + "gene_synonym", + "ECK3309" + ] + ], + "dna_sequence": "ATGTTTGAATTCTATATCGCCGCGCGTGAGCAGAAAGAAACAGGTCACCCTGGTATCTTCTCCCGACAAAAACACAGCACCATAATATATGTAATTTGTTTATTACTGATTTGCCTGTGGTTTGCAGGAATGGTGCTGGTTGGTGGGTATGCCAGGCAGCTATGGGTGCTTTGGATAGTAAAAGCCGAAGTCACTGTAGAGGCTGAAACGCCCGCTTTTAAACAATCAACACAACACTATTTCTTCAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTCGCGGTTGAGAATGCCCCCTCTTCTTCTGAAGACGAAGAAAATACTGTGGAAGAAAGCGAAGAGAAAGCCGGTTTAAGAGAGCGTGTCAAAAATGCACTGAACGAACTTGAGAGATAA", + "dna_sequence_length": 420, + "functions": [ + "part of gsp divergon involved in type II protein secretion" + ], + "id": "CDS_3260", + "location": [ + [ + "NC_000913", + 3453927, + "-", + 420 + ] + ], + "md5": "2427fa926b1ea8d625f1f3117e0d9721", + "parent_gene": "", + "protein_md5": "b6987b79a52b79d39ea0a6d578485e58", + "protein_translation": "MFEFYIAAREQKETGHPGIFSRQKHSTIIYVICLLLICLWFAGMVLVGGYARQLWVLWIVKAEVTVEAETPAFKQSTQHYFFKKQPLPVVESVEEEDDPGVAVENAPSSSEDEENTVEESEEKAGLRERVKNALNELER", + "protein_translation_length": 139, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45756" + ], + [ + "gene_synonym", + "JW3285" + ], + [ + "gene_synonym", + "gspA" + ], + [ + "gene_synonym", + "yheD" + ], + [ + "gene_synonym", + "ECK3310" + ], + [ + "gene_synonym", + "EcoGene:EG12888" + ], + [ + "gene_synonym", + "ASAP:ABE-0010867" + ], + [ + "gene_synonym", + "GI:16131202" + ], + [ + "gene_synonym", + "b3323" + ], + [ + "gene_synonym", + "NP_417782.1" + ], + [ + "gene_synonym", + "GeneID:947825" + ] + ], + "dna_sequence": "ATGTCTACGAGAAGAGAAGTTATTCTTTCCTGGTTGTGTGAGAAACGTCAAACCTGGCGTCTATGCTATTTGTTGGGTGAGGCTGGAAGTGGAAAAACCTGGCTGGCGCAGCAACTGCAAAAAGATAAACATCGCCGTGTGATTACTTTAAGCCTCGTTGTTTCCTGGCAAGGTAAGGCCGCATGGATCGTTACCGACGATAACGCGGCTGAACAGGGCTGCCGTGACAGCGCCTGGACGCGAGATGAGATGGCGGGGCAATTACTGCATGCGCTTCATCGAACTGATAGTCGCTGCCCTCTTATTATTATTGAAAATGCTCACCTGAATCACCGCCGCATACTTGATGATCTCCAACGCGCAATATCTCTTATTCCTGACGGTCAATTTTTGCTGATCGGCAGACCCGATCGAAAAGTCGAACGTGATTTTAAAAAACAGGGCATTGAACTTGTCTCGATAGGACGTCTGACGGAGCACGAACTTAAGGCAAGCATCCTTGAAGGTCAGAATATTGACCAACCCGATCTCCTTTTAACCGCCAGAGTTCTGAAACGGATAGCTTTATTATGTCGGGGCGATCGCAGAAAGCTGGCGCTTGCCGGCGAAACAATTCGCTTATTACAGCAAGCCGAGCAGACCAGCGTTTTCACAGCAAAACAATGGCGAATGATTTACCGCATATTGGGTGATAACCGCCCCCGGAAAATGCAGCTTGCCGTGGTGATGAGTGGAACCATTATCGCTCTTACCTGTGGTTGGCTACTGCTGTCCTCTTTTACAGCTACGTTACCCGTTCCTGCGTGGCTGATACCCGTAACGCCAGTAGTTAAACAAGATATGACTAAGGATATTGCTCATGTGGTGATGCGCGATAGTGAGGCGCTAAGCGTGTTATACGGCGTATGGGGGTACGAGGTCCCAGCTGATTCGGCCTGGTGCGATCAGGCAGTAAGAGCGGGGCTGGCATGTAAAAGTGGGAATGCTTCTTTACAAACATTGGTAGATCAGAATTTGCCCTGGATCGCATCGCTTAAAGTCGGGGACAAAAAATTGCCTGTTGTGGTCGTTCGCGTCGGTGAGGCTAGCGTTGATGTCCTCGTAGGTCAGCAAACGTGGACGCTGACACATAAATGGTTTGAGTCGGTATGGACGGGTGATTATCTTCTGTTGTGGAAAATGTCGCCGGAAGGGGAGAGTACCATTACGCGTGATAGCAGCGAGGAAGAGATTCTCTGGCTGGAAACGATGTTAAACCGCGCATTGCATATTTCGACAGAACCTTCGGCGGAGTGGCGTCCCTTGTTGGTAGAAAAAATAAAGCAATTTCAAAAAAGCCACCACTTGAAAACTGACGGTGTTGTTGGCTTTTCAACGTTAGTACATCTCTGGCAGGTGGCAGGGGAGAGTGCCTACTTATATCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGA", 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"GTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATCAACCAACAAACGCATTTCAGTCTGATTTCAGCCTTGCCGCTTTATGGCGTAACGAAAATCATGCTGGGGTAAAAGATGCAAATCCCGTGGCAGTTAATCAGGAAACACCTAAGCTCTCTATAGCGCTTAATGGCATTGTACTCACATCGAATGATGAGACTTCTTTTGTCTTAATTAATGAGGGGAGCGAACAAAAGCGATACTCCCTCAACGAAGCCCTTGAGTCAGCGCCGGGAACGTTTATTAGAAAAATAAATAAAACCAGCGTTGTGTTTGAAACTCACGGGCATTACGAAAAAGTAACTCTCCATCCAGGGCTACCTGACATCATCAAGCAGCCTGATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTACAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCGCTTGATAAATGTTTCCGTCGGGGAACTTACAGGAATGAATGGACTGCGTCATGAAAGGACTCAATAA", + "dna_sequence_length": 816, + "functions": [ + "general secretory pathway component, cryptic" + ], + "id": "CDS_3262", + "location": [ + [ + "NC_000913", + 3455578, + "+", + 816 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"f00201e29f9197dbc3190e012c90cd43", + "parent_gene": "", + "protein_md5": "c23d95a028b95cb251542d6b0d4378e5", + "protein_translation": "MRATDKQRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKAVSDIVALENALDMYKLDNHHYPTTNQGLESLVEAPTLPPLAANYNKEGYIKRLPADPWGNDYVLVNPGEHGAYDLLSAGPDGEMGTEDDITNWGLSKKKK", + "protein_translation_length": 145, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW3291" + ], + [ + "gene_synonym", + "hofH" + ], + [ + "gene_synonym", + "EcoGene:EG12887" + ], + [ + "gene_synonym", + "gspH" + ], + [ + "gene_synonym", + "ASAP:ABE-0010888" + ], + [ + "gene_synonym", + "NP_417788.1" + ], + [ + "gene_synonym", + "ECK3316" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P41443" + ], + [ + "gene_synonym", + "hopH" + ], + [ + "gene_synonym", + "GeneID:947834" + ], + [ + "gene_synonym", + "b3329" + ], + [ + "gene_synonym", + "GI:16131208" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "GI:16131210" + ], + [ + "gene_synonym", + "ASAP:ABE-0010892" + ], + [ + "gene_synonym", + "EcoGene:EG12893" + ], + [ + "gene_synonym", + "gspJ" + ], + [ + "gene_synonym", + "yheI" + ], + [ + "gene_synonym", + "NP_417790.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45761" + ], + [ + "gene_synonym", + "b3331" + ], + [ + "gene_synonym", + "GeneID:947832" + ] + ], + "dna_sequence": 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"yheK" + ], + [ + "gene_synonym", + "ECK3320" + ], + [ + "gene_synonym", + "gspL" + ], + [ + "gene_synonym", + "GeneID:947842" + ], + [ + "gene_synonym", + "b3333" + ], + [ + "gene_synonym", + "NP_417792.2" + ] + ], + "dna_sequence": 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"protein_translation_length": 158, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yheA" + ], + [ + "gene_synonym", + "GI:16131216" + ], + [ + "gene_synonym", + "bfd" + ], + [ + "gene_synonym", + "ECK3324" + ], + [ + "gene_synonym", + "JW3299" + ], + [ + "gene_synonym", + "ASAP:ABE-0010906" + ], + [ + "gene_synonym", + "EcoGene:EG11181" + ], + [ + "gene_synonym", + "GeneID:947836" + ], + [ + "gene_synonym", + "b3337" + ], + [ + "gene_synonym", + "NP_417796.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE56" + ] + ], + "dna_sequence": "ATGTACGTTTGTCTTTGTAATGGTATCAGCGATAAAAAAATTCGTCAGGCTGTGCGCCAGTTTTCCCCTCACTCGTTCCAGCAATTAAAAAAATTTATTCCGGTCGGCAATCAGTGCGGTAAATGTGTCCGGGCCGCGCGTGAAGTGATGGAGGATGAATTAATGCAGCTGCCGGAGTTTAAGGAGTCCGCATAA", + "dna_sequence_length": 195, + "functions": [ + "bacterioferritin-associated ferredoxin" + ], + "id": "CDS_3275", + "location": [ + [ + "NC_000913", + 3466991, + "-", + 195 + ] + ], + "md5": "541f02820c779ec2f478fe185cacd1b0", + "parent_gene": "", + "protein_md5": "f7eedf512dcd2ecef19d0652fbafd476", + "protein_translation": "MYVCLCNGISDKKIRQAVRQFSPHSFQQLKKFIPVGNQCGKCVRAAREVMEDELMQLPEFKESA", + "protein_translation_length": 64, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yheB" + ], + [ + "gene_synonym", + "EcoGene:EG11237" + ], + [ + "gene_synonym", + "JW3300" + ], + [ + "gene_synonym", + "ECK3325" + ], + [ + "gene_synonym", + "GeneID:947837" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13656" + ], + [ + "gene_synonym", + "b3338" + ], + [ + "gene_synonym", + "chiA" + ], + [ + "gene_synonym", + "ASAP:ABE-0010909" + ], + [ + "gene_synonym", + "NP_417797.1" + ], + [ + "gene_synonym", + "GI:16131217" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P0A9K9" + ], + [ + "gene_synonym", + "EcoGene:EG11663" + ], + [ + "gene_synonym", + "NP_417808.1" + ] + ], + "dna_sequence": "ATGAAAGTAGCAAAAGACCTGGTGGTCAGCCTGGCCTATCAGGTACGTACAGAAGACGGTGTGTTGGTTGATGAGTCTCCGGTGAGTGCGCCGCTGGACTACCTGCATGGTCACGGTTCCCTGATCTCTGGCCTGGAAACGGCGCTGGAAGGTCATGAAGTTGGCGACAAATTTGATGTCGCTGTTGGCGCGAACGACGCTTACGGTCAGTACGACGAAAACCTGGTGCAACGTGTTCCTAAAGACGTATTTATGGGCGTTGATGAACTGCAGGTAGGTATGCGTTTCCTGGCTGAAACCGACCAGGGTCCGGTACCGGTTGAAATCACTGCGGTTGAAGACGATCACGTCGTGGTTGATGGTAACCACATGCTGGCCGGTCAGAACCTGAAATTCAACGTTGAAGTTGTGGCGATTCGCGAAGCGACTGAAGAAGAACTGGCTCATGGTCACGTTCACGGCGCGCACGATCACCACCACGATCACGACCACGACGGTTGCTGCGGCGGTCATGGCCACGATCACGGTCATGAACACGGTGGCGAAGGCTGCTGTGGCGGTAAAGGCAACGGCGGTTGCGGTTGCCACTAA", + "dna_sequence_length": 591, + "functions": [ + "FKBP-type peptidyl prolyl cis-trans isomerase (rotamase)" + ], + "id": "CDS_3287", + "location": [ + [ + "NC_000913", + 3478497, + "-", + 591 + ] + ], + "md5": "fe7006a5cc0faf16547666459c61223e", + 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"gene_synonym", + "yhfW" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:90111580" + ], + [ + "gene_synonym", + "JW5696" + ], + [ + "gene_synonym", + "yhfY" + ], + [ + "gene_synonym", + "NP_417841.2" + ], + [ + "gene_synonym", + "ECK3369" + ], + [ + "gene_synonym", + "EcoGene:EG12920" + ] + ], + "dna_sequence": "ATGGAAACCAGACTCAACCTGCTTTGCGAGGCAGGCGTTATTGATAAGGACATCTGCAAAGGCATGATGCAGGTCGTCAACGTACTGGAAACAGAGTGCCATCTGCCGGTGCGCAGTGAGCAAGGAACGATGGCGATGACACATATGGCGAGTGCACTGATGCGCAGTCGCCGTGGTGAAGAAATAGAGCCGCTGGATAACGAGTTGCTGGCAGAACTGGCGCAATCCAGCCACTGGCAAGCCGTTGTGCAATTGCATCAGGTGTTGTTGAAGGAATTCGCACTGGAAGTTAACCCGTGTGAAGAAGGCTATTTGCTGGCCAACCTTTATGGATTATGGATGGCTGCTAACGAAGAGGTTTGA", + "dna_sequence_length": 363, + "functions": [ + "PRD domain protein" + ], + "id": "CDS_3320", + "location": [ + [ + "NC_000913", + 3511422, + "-", + 363 + ] + ], + "md5": "2f76b63ba6ea59a3af36e3d4bda6eccf", + "parent_gene": "", + "protein_md5": "6a08bdde1ce1a7aea4f29bc619d2f285", + "protein_translation": "METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV", + "protein_translation_length": 120, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b3383" + ], + [ + "gene_synonym", + "ASAP:ABE-0011052" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45552" + ], + [ + "gene_synonym", + "GeneID:947897" + ], + [ + "gene_synonym", + "ECK3370" + ], + [ + "gene_synonym", + "GI:49176343" + ], + [ + "gene_synonym", + "JW5948" + ], + [ + "gene_synonym", + "EcoGene:EG12921" + ], + [ + "gene_synonym", + "yhfZ" + ], + [ + "gene_synonym", + "YP_026214.1" + ] + ], + "dna_sequence": 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"ATGACTAAGCCCATCGTTTTTAGTGGCGCACAGCCCTCAGGTGAATTGACCATTGGTAACTACATGGGTGCGCTGCGTCAGTGGGTAAACATGCAGGATGACTACCATTGCATTTACTGTATCGTTGACCAACACGCGATCACCGTGCGCCAGGATGCACAGAAGCTGCGTAAAGCGACGCTGGATACGCTGGCCTTGTATCTGGCTTGTGGTATCGATCCTGAGAAAAGCACCATTTTTGTTCAGTCCCACGTGCCGGAACATGCACAGTTAGGCTGGGCACTGAACTGCTATACCTACTTCGGCGAACTGAGTCGCATGACGCAGTTTAAAGATAAATCTGCGCGTTATGCCGAGAACATCAACGCTGGTCTGTTTGACTATCCGGTGCTGATGGCAGCGGACATCCTGCTGTATCAAACTAATCTGGTACCGGTGGGTGAAGACCAGAAACAGCACCTCGAACTGAGCCGCGATATTGCCCAGCGTTTCAACGCGCTGTATGGCGAGATCTTTAAGGTGCCGGAGCCGTTTATTCCGAAATCTGGCGCGCGCGTAATGTCGCTGCTGGAGCCGACCAAGAAGATGTCCAAGTCTGACGATAATCGCAATAACGTTATCGGCCTGCTGGAAGATCCGAAATCGGTAGTGAAGAAAATCAAACGTGCGGTCACTGACTCCGACGAGCCGCCGGTAGTTCGCTACGATGTGCAGAACAAAGCGGGCGTTTCCAACCTGTTGGATATCCTTTCAGCGGTAACGGGCCAGAGCATCCCAGAACTGGAAAAACAGTTCGAAGGCAAGATGTATGGTCATCTGAAAGGTGAAGTGGCTGATGCCGTTTCCGGTATGCTGACTGAATTGCAGGAACGCTATCACCGTTTCCGCAACGATGAAGCCTTCCTGCAACAGGTGATGAAAGATGGCGCGGAAAAAGCCAGCGCGCACGCTTCCCGTACGCTAAAAGCGGTGTACGAAGCGATTGGTTTTGTGGCGAAGCCGTAA", 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"gene_synonym", + "GeneID:947895" + ], + [ + "gene_synonym", + "ECK3372" + ], + [ + "gene_synonym", + "NP_417844.1" + ], + [ + "gene_synonym", + "gph" + ], + [ + "gene_synonym", + "EcoGene:EG11871" + ] + ], + "dna_sequence": "ATGAATAAGTTTGAAGATATTCGCGGCGTCGCTTTTGATCTTGATGGTACGCTGGTCGACAGTGCTCCTGGTCTTGCTGCTGCGGTAGATATGGCGCTGTATGCGCTGGAGTTGCCCGTCGCAGGTGAAGAACGCGTTATTACCTGGATTGGTAACGGCGCAGATGTTCTGATGGAGCGCGCATTGACCTGGGCGCGTCAGGAACGTGCGACTCAGCGTAAAACAATGGGTAAACCGCCCGTTGATGACGACATTCCGGCAGAAGAACAGGTACGTATTCTGCGTAAACTGTTCGATCGCTACTATGGCGAGGTTGCCGAAGAGGGGACGTTTTTGTTCCCGCACGTTGCCGATACGTTGGGCGCGTTGCAGGCTAAAGGCCTGCCGCTAGGCCTGGTCACCAACAAACCGACGCCGTTCGTCGCGCCGCTGCTCGAAGCCTTAGATATCGCCAAATACTTCAGCGTGGTGATTGGTGGTGATGATGTGCAAAACAAAAAACCGCATCCGGACCCGCTGTTACTGGTGGCTGAGCGGATGGGAATTGCCCCACAACAGATGCTGTTTGTCGGCGACTCACGCAATGATATTCAGGCGGCAAAAGCGGCAGGTTGCCCATCAGTTGGCTTAACCTACGGATATAACTACGGCGAGGCTATCGATCTCAGCCAGCCTGATGTAATTTATCAGTCTATAAATGACCTTCTGCCCGCATTAGGGCTTCCGCATAGCGAAAATCAGGAATCGAAAAATGACTAA", + 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"GI:49176351" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00490" + ], + [ + "gene_synonym", + "EcoGene:EG10560" + ], + [ + "gene_synonym", + "ASAP:ABE-0011154" + ], + [ + "gene_synonym", + "JW5689" + ], + [ + "gene_synonym", + "ECK3404" + ], + [ + "gene_synonym", + "malA" + ] + ], + "dna_sequence": "ATGTCACAACCTATTTTTAACGATAAGCAATTTCAGGAAGCGCTTTCACGTCAGTGGCAGCGTTATGGCTTAAATTCTGCGGCTGAAATGACTCCTCGCCAGTGGTGGCTAGCAGTGAGTGAAGCACTGGCCGAAATGCTGCGTGCTCAGCCATTCGCCAAGCCGGTGGCGAATCAGCGACATGTTAACTACATCTCAATGGAGTTTTTGATTGGTCGCCTGACGGGCAACAACCTGTTGAATCTCGGCTGGTATCAGGATGTACAGGATTCGTTGAAGGCTTATGACATCAATCTGACGGACCTGCTGGAAGAAGAGATCGACCCGGCGCTGGGTAACGGTGGTCTGGGACGTCTGGCGGCGTGCTTCCTCGACTCAATGGCAACTGTCGGTCAGTCTGCGACGGGTTACGGTCTGAACTATCAATATGGTTTGTTCCGCCAGTCTTTTGTCGATGGCAAACAGGTTGAAGCGCCGGATGACTGGCATCGCAGTAACTACCCGTGGTTCCGCCACAACGAAGCACTGGATGTGCAGGTAGGGATTGGCGGTAAAGTGACGAAAGACGGACGCTGGGAGCCGGAGTTTACCATTACCGGTCAAGCGTGGGATCTCCCCGTTGTCGGCTATCGTAATGGCGTGGCGCAGCCGCTGCGTCTGTGGCAGGCGACGCACGCGCATCCGTTTGATCTGACTAAATTTAACGACGGTGATTTCTTGCGTGCCGAACAGCAGGGCATCAATGCGGAAAAACTGACCAAAGTTCTCTATCCAAACGACAACCATACTGCCGGTAAAAAGCTGCGCCTGATGCAGCAATACTTCCAGTGTGCCTGTTCGGTAGCGGATATTTTGCGTCGCCATCATCTGGCGGGGCGTAAACTGCACGAACTGGCGGATTACGAAGTTATTCAGCTGAACGATACCCACCCAACTATCGCGATTCCAGAACTGCTGCGCGTGCTGATCGATGAGCACCAGATGAGCTGGGATGACGCCTGGGCCATTACCAGCAAAACTTTCGCTTACACCAACCATACCCTGATGCCAGAAGCGCTGGAACGCTGGGATGTGAAACTGGTGAAAGGCTTACTGCCGCGCCACATGCAGATTATTAACGAAATTAATACTCGCTTTAAAACGCTGGTAGAGAAAACCTGGCCGGGCGATGAAAAAGTGTGGGCCAAACTGGCGGTGGTGCACGACAAACAAGTGCATATGGCGAACCTGTGTGTGGTTGGCGGTTTCGCGGTGAACGGTGTTGCGGCGCTGCACTCGGATCTGGTGGTGAAAGATCTGTTCCCGGAATATCACCAGCTATGGCCGAACAAATTCCATAACGTCACCAACGGTATTACCCCACGTCGCTGGATCAAACAGTGCAACCCGGCACTGGCGGCTCTGTTGGATAAATCACTGCAAAAAGAGTGGGCTAACGATCTCGATCAGCTGATCAATCTGGAAAAATTCGCTGATGATGCGAAATTCCGTCAGCAATATCGCGAGATCAAGCAGGCGAATAAAGTCCGTCTGGCGGAGTTTGTGAAAGTTCGTACCGGTATTGAGATCAATCCACAGGCGATTTTCGATATTCAGATCAAACGTTTGCATGAGTACAAACGCCAGCACCTGAATCTGCTGCATATTCTGGCGTTGTACAAAGAAATTCGTGAAAACCCGCAGGCTGATCGCGTACCGCGCGTCTTCCTCTTCGGCGCGAAAGCGGCACCGGGCTACTACCTGGCGAAGAATATTATCTTTGCGATCAACAAAGTGGCTGACGTGATCAACAACGATCCGCTGGTTGGCGATAAGTTGAAGGTGGTGTTCCTGCCGGATTATTGCGTTTCGGCGGCGGAAAAACTGATCCCGGCGGCGGATATCTCCGAACAAATTTCGACTGCAGGTAAAGAAGCTTCCGGTACCGGCAATATGAAACTGGCGCTCAATGGTGCGCTTACTGTCGGTACGCTGGATGGGGCGAACGTTGAAATCGCCGAGAAAGTCGGTGAAGAAAATATCTTTATTTTTGGTCATACCGTGGAACAAGTGAAGGCAATTCTGGCCAAAGGCTACGACCCGGTGAAATGGCGGAAGAAAGATAAGGTGCTGGACGCAGTATTGAAAGAGCTGGAAAGCGGTAAATACAGCGACGGCGATAAGCATGCCTTCGACCAGATGCTGCACAGTATCGGCAAACAGGGCGGCGATCCGTATCTGGTGATGGCGGATTTCGCAGCCTATGTAGAGGCACAAAAGCAGGTGGATGTGCTGTACCGCGACCAGGAGGCCTGGACTCGCGCGGCGATCCTCAATACCGCCCGCTGCGGTATGTTTAGCTCGGATCGCTCTATTCGCGATTATCAGGCTCGTATCTGGCAGGCAAAACGCTAA", 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"MSQPIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPVANQRHVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR", + "protein_translation_length": 797, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:947921" + ], + [ + "gene_synonym", + "ASAP:ABE-0011162" + ], + [ + "gene_synonym", + "ECK3405" + ], + [ + "gene_synonym", + "malT" + ], + [ + "gene_synonym", + "b3418" + ], + [ + "gene_synonym", + "GI:16131294" + ], + [ + "gene_synonym", + "EcoGene:EG10562" + ], + [ + "gene_synonym", + "malA" + ], + [ + "gene_synonym", + "JW3381" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06993" + ], + [ + "gene_synonym", + "NP_417877.1" + ] + ], + "dna_sequence": "ATGCTGATTCCGTCAAAACTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAGTGGGCGGCAGGCAAAAACGATATCGGCTGGTACTCGCTGGATGAAGGTGATAACCAGCAAGAGCGTTTCGCCAGCTATCTCATTGCCGCCGTGCAGCAGGCAACCAACGGTCACTGTGCGATATGTGAGACGATGGCGCAAAAACGGCAATATGCCAGCCTGACGTCACTCTTCGCCCAGCTTTTCATTGAGCTGGCGGAATGGCATAGCCCACTTTATCTGGTCATCGATGACTATCATCTGATCACTAATCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCAGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCCCTCATCACCCGTGTGACCGGCGAAGAAAACGGGCAAATGCGCCTCGAAGAGATTGAGCGTCAGGGGCTGTTTTTACAGCGGATGGATGATACCGGCGAGTGGTTCTGCTATCACCCGCTGTTTGGTAACTTCCTGCGCCAGCGCTGCCAGTGGGAACTGGCGGCGGAGCTGCCGGAAATCCACCGTGCCGCCGCAGAAAGCTGGATGGCCCAGGGATTTCCCAGCGAAGCAATTCATCATGCGCTGGCGGCAGGCGATGCGCTGATGCTGCGCGATATTCTGCTTAATCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGTTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGAGAAGACACCATGCACGCAGAATTTAACGCTCTGCGCGCCCAGGTGGCGATTAACGATGGTAATCCGGATGAAGCGGAACGGCTGGCAAAACTGGCACTGGAAGAGCTGCCGCCGGGCTGGTTCTATAGCCGCATTGTGGCAACCTCGGTGCTGGGTGAAGTGCTGCACTGCAAAGGCGAATTGACCCGCTCACTGGCGCTAATGCAGCAAACCGAACAGATGGCACGCCAGCACGATGTCTGGCACTACGCTTTGTGGAGTTTAATCCAGCAAAGTGAAATTCTGTTTGCCCAAGGGTTCCTGCAAACCGCGTGGGAAACGCAGGAAAAAGCATTCCAGCTGATCAACGAGCAGCATCTGGAACAGCTGCCAATGCATGAGTTTCTGGTGCGCATTCGTGCGCAGCTGTTATGGGCCTGGGCGCGGCTGGATGAAGCCGAAGCGTCGGCGCGTAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAAGTCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTTGATGAGCGATCTCAACCGTAACCTGTTGCTGCTTAATCAACTGTACTGGCAGGCCGGACGTAAAAGTGACGCCCAGCGCGTGTTGCTGGACGCATTAAAACTGGCGAATCGCACCGGATTTATCAGCCATTTTGTCATCGAAGGCGAAGCGATGGCGCAACAACTGCGTCAGCTGATTCAGCTTAATACGCTGCCGGAACTGGAACAGCATCGCGCGCAGCGTATTCTGCGAGAAATCAATCAACATCATCGGCATAAATTCGCCCATTTCGATGAGAATTTCGTTGAACGTCTGCTAAATCATCCTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAA", + "dna_sequence_length": 2706, + "functions": [ + "mal regulon transcriptional activator" + ], + "id": "CDS_3356", + "location": [ + [ + "NC_000913", + 3553085, + "+", + 2706 + ] + ], + "md5": "bfba302a0dda4eb32cab2c288034a7e0", + "parent_gene": "", + "protein_md5": "56b536cd02ed8a727acb9142344361a3", + "protein_translation": "MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYGKTTLISQWAAGKNDIGWYSLDEGDNQQERFASYLIAAVQQATNGHCAICETMAQKRQYASLTSLFAQLFIELAEWHSPLYLVIDDYHLITNPVIHESMRFFIRHQPENLTLVVLSRNLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRLSSPIEAAESSRICDDVSGWATALQLIALSARQNTHSAHKSARRLAGINASHLSDYLVDEVLDNVDLATRHFLLKSAILRSMNDALITRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFCYHPLFGNFLRQRCQWELAAELPEIHRAAAESWMAQGFPSEAIHHALAAGDALMLRDILLNHAWSLFNHSELSLLEESLKALPWDSLLENPQLVLLQAWLMQSQHRYGEVNTLLARAEHEIKDIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRILREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQREWQVLGLIYSGYSNEQIAGELEVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYGV", + "protein_translation_length": 901, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174104" + ], + [ + "gene_synonym", + "b4475" + ], + [ + "gene_synonym", + "yhgJ" + ], + [ + "gene_synonym", + "yhgK" + ], + [ + "gene_synonym", + "YP_026219.1" + ], + [ + "gene_synonym", + "rtcA" + ], + [ + "gene_synonym", + "GI:49176352" + ], + [ + "gene_synonym", + "EcoGene:EG12938" + ], + [ + "gene_synonym", + "GeneID:2847707" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46849" + ], + [ + "gene_synonym", + "JW5688" + ], + [ + "gene_synonym", + "ECK3406" + ] + ], + "dna_sequence": "ATGAAAAGGATGATTGCGCTGGATGGCGCACAGGGCGAAGGTGGCGGGCAGATCCTGCGCTCGGCGCTGAGCCTGTCGATGATAACCGGCCAGCCATTTACCATCACCAGCATTCGTGCCGGGCGGGCGAAACCGGGGCTGTTGCGCCAGCATCTGACCGCGGTAAAGGCGGCGACGGAAATTTGCGGAGCAACCGTGGAAGGCGCGGAGCTGGGGTCGCAGCGTCTGCTCTTCCGGCCCGGCACCGTGCGCGGCGGCGATTACCGCTTTGCTATCGGTAGCGCCGGAAGTTGTACGCTGGTGCTGCAAACGGTGCTGCCCGCGCTGTGGTTTGCCGATGGACCTTCGCGTGTTGAAGTGAGCGGCGGCACCGATAACCCGTCGGCGCCGCCTGCGGATTTTATCCGCCGGGTGCTGGAGCCGCTGCTGGCGAAAATAGGAATTCATCAGCAAACCACGCTGTTACGCCACGGTTTTTACCCTGCCGGAGGCGGTGTGGTGGCAACGGAAGTCTCGCCCGTGGCATCGTTTAACACCTTGCAACTTGGCGAGCGCGGGAACATTGTGCAGATGCGTGGAGAAGTTCTATTAGCTGGTGTGCCGCGCCATGTTGCTGAGCGTGAAATCGCTACACTGGCGGGGAGTTTTTCCCTGCATGAACAGAATATTCATAACCTGCCGCGCGACCAGGGGCCGGGTAATACCGTCTCGCTTGAAGTCGAAAGTGAAAATATCACCGAACGCTTTTTTGTCGTCGGTGAAAAGCGCGTCAGTGCCGAGGTGGTTGCGGCACAGTTGGTGAAAGAGGTGAAACGCTACCTGGCAAGCACGGCGGCGGTGGGGGAATATCTTGCTGACCAACTGGTGCTACCGATGGCGCTGGCGGGCGCGGGGGAATTTACGGTCGCCCATCCCTCATGCCATCTGCTGACCAATATCGCGGTGGTGGAGCGTTTCTTGCCGGTGCGGTTTAGTTTGATAGAAACAGATGGCGTAACGCGGGTGAGCATTGAATGA", + "dna_sequence_length": 1017, + "functions": [ + "RNA 3'-terminal phosphate cyclase" + ], + "id": "CDS_3357", + "location": [ + [ + "NC_000913", + 3556849, + "-", + 1017 + ] + ], + "md5": "d250a328eb6f29cd4bf7b9ca2efcca85", + "parent_gene": "", + "protein_md5": "0022a6fb53681a7580a4d825014021f4", + "protein_translation": "MKRMIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIETDGVTRVSIE", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011170" + ], + [ + "gene_synonym", + "yhgL" + ], + [ + "gene_synonym", + "rtcB" + ], + [ + "gene_synonym", + "GeneID:947929" + ], + [ + "gene_synonym", + "b3421" + ], + [ + "gene_synonym", + "GI:16131295" + ], + [ + "gene_synonym", + "NP_417879.1" + ], + [ + "gene_synonym", + "EcoGene:EG12939" + ], + [ + "gene_synonym", + "JW3384" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46850" + ], + [ + "gene_synonym", + "ECK3407" + ] + ], + "dna_sequence": "ATGAATTACGAATTACTGACCACTGAAAATGCCCCGGTAAAAATGTGGACCAAAGGCGTGCCGGTAGAGGCCGATGCGCGTCAGCAACTTATTAATACGGCGAAGATGCCGTTTATTTTCAAACATATTGCGGTAATGCCTGATGTACACCTGGGTAAAGGTTCCACCATTGGTAGCGTGATCCCGACCAAAGGGGCGATTATTCCGGCGGCGGTGGGCGTGGATATTGGCTGTGGAATGAACGCGCTGCGTACCGCGTTAACGGCGGAAGACCTGCCTGAAAACCTGGCAGAGCTGCGTCAGGCGATTGAAACGGCCGTGCCGCACGGGCGTACCACTGGCCGTTGTAAACGTGATAAAGGTGCCTGGGAAAATCCACCTGTTAACGTCGATGCTAAATGGGCTGAGCTTGAAGCCGGTTATCAGTGGTTAACGCAAAAATATCCCCGTTTCCTGAATACCAATAACTATAAACACCTGGGAACGCTGGGAACCGGTAACCACTTTATTGAAATCTGCCTTGATGAGTCGGACCAGGTGTGGATTATGCTGCACTCCGGTTCACGCGGAATTGGTAACGCCATCGGGACTTACTTTATCGATCTGGCACAAAAAGAGATGCAGGAAACGCTTGAGACGTTGCCGTCGCGTGATCTGGCGTACTTTATGGAAGGTACGGAATACTTTGATGATTACCTGAAAGCCGTGGCCTGGGCGCAGCTTTTTGCCAGCCTTAACCGCGATGCGATGATGGAAAACGTGGTAACGGCATTGCAGAGCATTACGCAGAAAACGGTCAGACAGCCACAAACGCTGGCGATGGAAGAGATCAACTGTCACCACAACTATGTGCAAAAAGAACAGCACTTTGGTGAAGAGATCTACGTGACGCGTAAAGGCGCGGTGTCTGCGCGTGCTGGTCAATATGGAATTATTCCCGGTTCGATGGGAGCAAAAAGCTTTATCGTCCGTGGGCTGGGAAATGAAGAGTCGTTCTGTTCGTGCAGCCACGGTGCCGGGCGGGTAATGAGCCGAACTAAAGCGAAAAAACTGTTCAGCGTGGAAGATCAAATTCGTGCCACCGCGCATGTGGAATGCCGTAAAGATGCCGAAGTGATCGACGAAATCCCGATGGCGTATAAAGATATTGATGCGGTGATGGCGGCACAAAGCGATCTGGTGGAAGTTATCTATACCCTGCGTCAGGTGGTGTGCGTAAAAGGATAA", + "dna_sequence_length": 1227, + "functions": [ + "RNA-splicing ligase" + ], + "id": "CDS_3358", + "location": [ + [ + "NC_000913", + 3558079, + "-", + 1227 + ] + ], + "md5": "6c67854dc9ab00fc4df4a83704af23eb", + "parent_gene": "", + "protein_md5": "8520236d05a6afc2774df1b44cc8a47f", + "protein_translation": "MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQAIETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQLFASLNRDAMMENVVTALQSITQKTVRQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMAAQSDLVEVIYTLRQVVCVKG", + "protein_translation_length": 408, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011174" + ], + [ + "gene_synonym", + "GI:16131296" + ], + [ + "gene_synonym", + "GeneID:947928" + ], + [ + "gene_synonym", + "yhgB" + ], + [ + "gene_synonym", + "b3422" + ], + [ + "gene_synonym", + "EcoGene:EG12356" + ], + [ + "gene_synonym", + "ECK3408" + ], + [ + "gene_synonym", + "NP_417880.1" + ], + [ + "gene_synonym", + "JW3385" + ], + [ + "gene_synonym", + "rtcR" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38035" + ] + ], + "dna_sequence": 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"b3429" + ], + [ + "gene_synonym", + "NP_417887.1" + ], + [ + "gene_synonym", + "GI:16131303" + ], + [ + "gene_synonym", + "EcoGene:EG10377" + ], + [ + "gene_synonym", + "GeneID:947932" + ], + [ + "gene_synonym", + "ASAP:ABE-0011200" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6U8" + ], + [ + "gene_synonym", + "JW3392" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:947942" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6V1" + ], + [ + "gene_synonym", + "NP_417888.1" + ], + [ + "gene_synonym", + "b3430" + ], + [ + "gene_synonym", + "ASAP:ABE-0011204" + ], + [ + "gene_synonym", + "JW3393" + ], + [ + "gene_synonym", + "EcoGene:EG10379" + ] + ], + "dna_sequence": 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"protein_translation_length": 657, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b3432" + ], + [ + "gene_synonym", + "glgB" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07762" + ], + [ + "gene_synonym", + "GeneID:947940" + ], + [ + "gene_synonym", + "GI:16131306" + ], + [ + "gene_synonym", + "ECK3418" + ], + [ + "gene_synonym", + "ASAP:ABE-0011209" + ], + [ + "gene_synonym", + "EcoGene:EG10378" + ], + [ + "gene_synonym", + "JW3395" + ], + [ + "gene_synonym", + "NP_417890.1" + ] + ], + "dna_sequence": 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"gene_synonym", + "hom" + ], + [ + "gene_synonym", + "ECK3419" + ], + [ + "gene_synonym", + "EcoGene:EG10088" + ], + [ + "gene_synonym", + "dap" + ], + [ + "gene_synonym", + "asd" + ], + [ + "gene_synonym", + "JW3396" + ], + [ + "gene_synonym", + "ASAP:ABE-0011211" + ], + [ + "gene_synonym", + "NP_417891.1" + ] + ], + "dna_sequence": 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"GI:16131308" + ], + [ + "gene_synonym", + "EcoGene:EG12941" + ], + [ + "gene_synonym", + "GeneID:947938" + ], + [ + "gene_synonym", + "JW3397" + ], + [ + "gene_synonym", + "ASAP:ABE-0011216" + ], + [ + "gene_synonym", + "ECK3420" + ] + ], + "dna_sequence": "ATGAATGAAATCATTTCTGCAGCAGTTTTATTGATCCTGATTATGGATCCGCTCGGAAACCTACCTATTTTCATGTCCGTACTGAAACATACTGAACCGAAAAGACGGCGGGCAATCATGGTGCGAGAGTTGCTTATTGCTCTCCTGGTGATGCTGGTGTTCCTGTTTGCGGGTGAGAAAATTCTGGCATTTCTTAGCCTACGAGCAGAAACCGTCTCCATTTCTGGCGGCATCATTCTGTTTCTGATCGCCATTAAAATGATTTTCCCCAGCGCTTCAGGAAATAGCAGCGGGCTTCCGGCAGGTGAAGAGCCATTTATCGTGCCGTTGGCAATTCCGTTAGTCGCCGGGCCGACTATTCTCGCCACGCTGATGTTGTTGTCTCATCAGTACCCGAATCAGATGGGGCATCTGGTGATTGCTCTGCTGCTGGCCTGGGGCGGCACCTTTGTCATCCTGCTACAGTCTTCGCTATTTTTACGTCTGCTGGGCGAGAAAGGGGTGAACGCACTTGAACGCCTGATGGGATTGATTCTGGTGATGATGGCAACCCAGATGTTCCTCGACGGCATTCGAATGTGGATGAAGGGGTAA", + "dna_sequence_length": 594, + "functions": [ + "UPF0056 family inner membrane protein" + ], + "id": "CDS_3371", + "location": [ + [ + 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"gene_synonym", + "UniProtKB/Swiss-Prot:P46854" + ], + [ + "gene_synonym", + "ECK3427" + ], + [ + "gene_synonym", + "ASAP:ABE-0011240" + ], + [ + "gene_synonym", + "yhhY" + ] + ], + "dna_sequence": "ATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGAGGCCATCAGGCAGATTCACGCCCAGCCGGAGGTGTATTGCAACACACTACAGGTGCCTCATCCTTCCGATCATATGTGGCAGGAGCGACTCGCCGATCGTCCCGGCATCAAGCAACTCGTCGCCTGTATTGATGGAGACGTCGTGGGCCATCTCACCATTGACGTGCAACAGCGCCCACGCCGCAGTCATGTTGCCGATTTTGGTATCTGTGTCGACTCTCGTTGGAAGAACCGCGGCGTCGCCAGCGCCCTGATGCGAGAGATGATTGAAATGTGCGACAACTGGTTGCGGGTAGATCGCATTGAACTAACCGTGTTTGTCGATAACGCCCCGGCAATTAAGGTCTATAAAAAATACGGCTTTGAAATTGAAGGGACTGGTAAGAAGTACGCATTGCGTAATGGTGAATATGTCGATGCATATTATATGGCGCGGGTGAAGTAA", + "dna_sequence_length": 489, + "functions": [ + "aminoacyl nucleotide detoxifying acetyltransferase" + ], + "id": "CDS_3377", + "location": [ + [ + "NC_000913", + 3581138, + "+", + 489 + ] + ], + "md5": "3b179446f75b42c9b4b3f3cbaaf9cb02", + "parent_gene": "", + "protein_md5": "5d8fd3de559e92be1c9ef0c239fa637b", + "protein_translation": "MSEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVADFGICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDAYYMARVK", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011244" + ], + [ + "gene_synonym", + "GI:16131314" + ], + [ + "gene_synonym", + "b3442" + ], + [ + "gene_synonym", + "EcoGene:EG12946" + ], + [ + "gene_synonym", + "JW3406" + ], + [ + "gene_synonym", + "NP_417899.1" + ], + [ + "gene_synonym", + "GeneID:947952" + ], + [ + "gene_synonym", + "ECK3428" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46855" + ], + [ + "gene_synonym", + "yhhZ" + ] + ], + "dna_sequence": 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amino acid ABC transporter permease" + ], + "id": "CDS_3393", + "location": [ + [ + "NC_000913", + 3596403, + "-", + 927 + ] + ], + "md5": "810adac079d457a5883b3ff53e7f40b6", + "parent_gene": "", + "protein_md5": "f3b3126d27a413d02b5c6fee54c114c0", + "protein_translation": "MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWLLVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSFALLILVLLVMPTGILGRPEVEKV", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b3458" + ], + [ + "gene_synonym", + "ASAP:ABE-0011292" + ], + [ + "gene_synonym", + "GeneID:947964" + ], + [ + "gene_synonym", + "ECK3442" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04816" + ], + [ + "gene_synonym", + "EcoGene:EG10540" + ], + [ + "gene_synonym", + "hrbB" + ], + [ + "gene_synonym", + 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"nickel ABC transporter permease" + ], + "id": "CDS_3413", + "location": [ + [ + "NC_000913", + 3615241, + "+", + 945 + ] + ], + "md5": "9567141b38c288924dd0bebd57dc0498", + "parent_gene": "", + "protein_md5": "35e173d071fe7b3a1f9fcc71f85b73bd", + "protein_translation": "MLRYVLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNLPPTPEMLASTRTMLGLDQPLYVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATLELAGAALVLILLTSVPLGIWAARHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSVYLQWLPAMGYGGWQHIILPAVSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLNDKQTERRHILRNASLPMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPVIQCFTLMMVVVFVVCNLIVDLLNAALDPRIRRHEGAHA", + "protein_translation_length": 314, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "nikC" + ], + [ + "gene_synonym", + "ASAP:ABE-0011358" + ], + [ + "gene_synonym", + "JW3443" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFA9" + ], + [ + "gene_synonym", + "ECK3462" + ], + [ + "gene_synonym", + "GI:16131350" + ], + [ + "gene_synonym", + "NP_417935.1" + ], + [ + "gene_synonym", + 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834 + ] + ], + "md5": "6f6d4e61e730699aae4cfff2fcf5e3e5", + "parent_gene": "", + "protein_md5": "a83ef7fa5029f22dd900045c96542cdd", + "protein_translation": "MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSRLLSPDAQHWLGTDHLGRDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGRVDQATMRVADMFMTFPTSILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVFVDHLAGAVIPSLLVLATLDIGHMMLHVAGMSFLGLGVTAPTAEWGVMINDARQYIWTQPLQMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHAH", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK3463" + ], + [ + "gene_synonym", + "JW3444" + ], + [ + "gene_synonym", + "nikD" + ], + [ + "gene_synonym", + "ASAP:ABE-0011360" + ], + [ + "gene_synonym", + "GeneID:947989" + ], + [ + "gene_synonym", + "GI:16131351" + ], + [ + "gene_synonym", + "hydC" + ], + [ + "gene_synonym", + "hydD" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33593" + ], + [ + "gene_synonym", + "NP_417936.1" + ], + [ + "gene_synonym", + "b3479" + ], + [ + "gene_synonym", + 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"ATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACATCAACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGA", + "dna_sequence_length": 402, + "functions": [ + "transcriptional repressor, Ni-binding" + ], + "id": "CDS_3417", + "location": [ + [ + "NC_000913", + 3618588, + "+", + 402 + ] + ], + "md5": "574d5c784aa00ce013ee9bc26529e69a", + "parent_gene": "", + "protein_md5": "6d977bb96b25187abc5348661bf9f009", + "protein_translation": "MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED", + "protein_translation_length": 133, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:947994" + ], + [ + "gene_synonym", + "ECK3466" + ], + [ + "gene_synonym", + "YP_026224.1" + ], + [ + "gene_synonym", + "EcoGene:EG10847" + ], + [ + "gene_synonym", + "JW5679" + ], + [ + "gene_synonym", + "GI:49176361" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16917" + ], + [ + "gene_synonym", + "b3482" + ], + [ + "gene_synonym", + "rhsB" + ], + [ + "gene_synonym", + "ASAP:ABE-0011371" + ] + ], + "dna_sequence": "ATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCACCTGTTTCCCGGTGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCACCATCACCGACAGCCTGGACCGCCGTGAAGTGCTGCACACGCAGGGCGAAGCCGGGCTGAAGCGGGTGGTGAAAAAGGAACACGCGGACGGCAGCGTCACGCAGAGTCAGTTTGACGCCGTGGGCAGGCTCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCAGATGACGGCGGTGCACCGCGAGGAAGGGCTGAGTCAGTACCGCGCATACGACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGAACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACGATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTGTATGGATATCAATTGAATCCGATATCAGACATCGACCCCCTGGGTTTATCTATGTGGGAGGATGCAAAATCGGGGGCATGTACTAATGGTCTTTGCGGCACACTATCCGCTATGATAGGTCCAGATAAATTTGATTCTATAGATAGCACCGCATATGACGCCTTAAATAAAATAAATAGCCAATCTATTTGCGAAGATAAAGAGTTCGCTGGTTTAATATGTAAGGATAATAGTGGCAGATATTTCTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATACTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCAAGTCATTTTATTTAGGTACGCCCAGTGGTAATTTTAAAGCAATAGATAACCACGGGAAGGAAATAACAAACAGAAAAGGATTACCTAATGTCTGCAGAGTTCATGGTAATATGTAA", 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"MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNPLLGAKVLPGETDIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDGAWRHFRLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRGELAVVYDRSGKQVRSFTYDDKYRGRMVAHRHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLDRREVLHTQGEAGLKRVVKKEHADGSVTQSQFDAVGRLRAQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFYYNHHNQLTSATGPDGLELRREYDELGRLIQETAPDGDITRYRYDNPHSDLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQMTAVHREEGLSQYRAYDSRGQLIAVKDTQGHETRYEYNIAGDLTAVIAPDGSRNGTQYDAWGKAVRTTQGGLTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVKGETAERWQYDERGWLTDISHISEGHRVAVHYRYDEKGRLTGERQTVHHPQTEALLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGYLAGMKLGDTPLVEYTRDRLHRETLRSFGRYELTTAYTPAGQLQSQHLNSLLSDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIPYATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYEEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRSRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNLYGYQLNPISDIDPLGLSMWEDAKSGACTNGLCGTLSAMIGPDKFDSIDSTAYDALNKINSQSICEDKEFAGLICKDNSGRYFSTAPNRGERKGSYPFNSPCPNGTEKVSAYHTHGADSHGEYWDEIFSGKDEKIVKSKDNNIKSFYLGTPSGNFKAIDNHGKEITNRKGLPNVCRVHGNM", 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protein for polymorphic toxin RhsB" + ], + "id": "CDS_3419", + "location": [ + [ + "NC_000913", + 3623399, + "+", + 384 + ] + ], + "md5": "179df13dcd005e7c330e8ef91b38e675", + "parent_gene": "", + "protein_md5": "b63fb11714ba2af00abcadccf55dc08f", + "protein_translation": "MSAEFMVICKKILFRNCVIVSLFVFTYNTWAQCNNNIKIMRKYESEGKYTVRNLVKNKAIALELAEIYVKNRYGQDAAEEEKPYEITELTTSWVVEGTIHSDQIAGGVFIIEIGKNDGRILNFGHGK", + "protein_translation_length": 127, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:1450291" + ], + [ + "gene_synonym", + "b4552" + ], + [ + "gene_synonym", + "EcoGene:EG14369" + ], + [ + "gene_synonym", + "ASAP:ABE-0285073" + ], + [ + "gene_synonym", + "ECK3468" + ], + [ + "gene_synonym", + "yrhC" + ], + [ + "gene_synonym", + "JW5678" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16131356" + ], + [ + "gene_synonym", + "yhhI" + ], + [ + "gene_synonym", + "EcoGene:EG11525" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28912" + ], + [ + "gene_synonym", + "b3484" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "yhhJ" + ], + [ + "gene_synonym", + "ASAP:ABE-0011379" + ], + [ + "gene_synonym", + "JW5677" + ], + [ + "gene_synonym", + "NP_417942.6" + ], + [ + "gene_synonym", + "b3485" + ] + ], + "dna_sequence": 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"EcoGene:EG12223" + ], + [ + "gene_synonym", + "yhiH" + ], + [ + "gene_synonym", + "GeneID:947998" + ], + [ + "gene_synonym", + "GI:49176363" + ], + [ + "gene_synonym", + "YP_026225.1" + ], + [ + "gene_synonym", + "b3486" + ], + [ + "gene_synonym", + "JW5676" + ], + [ + "gene_synonym", + "rbbA" + ] + ], + "dna_sequence": 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"MTHLELVPVPPVAQLAGVSQHYGKTVALNNITLDIPARCMVGLIGPDGVGKSSLLSLISGARVIEQGNVMVLGGDMRDPKHRRDVCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREVRINELLTSTGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLIDSIRQRQSNMSVLVATAYMEEAERFDWLVAMNAGEVLATGSAEELRQQTQSATLEEAFINLLPQAQRQAHQAVVIPPYQPENAEIAIEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERFKLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTPQELVEKRGAASLEEAFIAYLQEAAGQSNEAEAPPVVHDTTHAPRQGFSLRRLFSYSRREALELRRDPVRSTLALMGTVILMLIMGYGISMDVENLRFAVLDRDQTVSSQAWTLNLSGSRYFIEQPPLTSYDELDRRMRAGDITVAIEIPPNFGRDIARGTPVELGVWIDGAMPSRAETVKGYVQAMHQSWLQDVASRQSTPASQSGLMNIETRYRYNPDVKSLPAIVPAVIPLLLMMIPSMLSALSVVREKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFFLLCGLSVFVFGVPHKGSFLTLTLAALLYIIIATGMGLLISTFMKSQIAAIFGTAIITLIPATQFSGMIDPVASLEGPGRWIGEVYPTSHFLTIARGTFSKALDLTDLWQLFIPLLIAIPLVMGLSILLLKKQEG", + "protein_translation_length": 911, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_417944.1" + ], + [ + "gene_synonym", + "JW3454" + ], + [ + "gene_synonym", + "ECK3472" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37626" + ], + [ + "gene_synonym", + "ASAP:ABE-0011385" + ], + [ + "gene_synonym", + "GI:16131359" + ], + [ + "gene_synonym", + "EcoGene:EG12224" + ], + [ + "gene_synonym", + "yhiI" + ], + [ + "gene_synonym", + "b3487" + ], + [ + "gene_synonym", + "GeneID:948003" + ] + ], + "dna_sequence": "ATGGATAAGAGTAAGCGCCATCTGGCGTGGTGGGTTGTCGGGTTACTGGCGGTGGCGGCTATCGTGGCGTGGTGGCTGTTGCGCCCGGCAGGTGTGCCGGAAGGCTTTGCTGTCAGTAATGGGCGCATTGAAGCGACGGAAGTGGATATTGCCAGCAAAATTGCCGGGCGTATCGACACCATTCTGGTGAAAGAAGGCAAGTTTGTTCGCGAAGGTGAAGTGCTGGCGAAGATGGATACTCGCGTGTTGCAGGAACAGCGACTGGAAGCCATCGCGCAAATCAAAGAGGCACAAAGCGCCGTTGCTGCCGCGCAGGCTTTGCTGGAGCAACGACAAAGCGAAACTCGTGCCGCACAGTCGCTGGTTAATCAACGCCAGGCAGAACTGGACTCCGTAGCAAAACGTCATACGCGTTCCCGTTCACTGGCCCAACGAGGGGCTATTTCTGCGCAACAGCTGGATGACGATCGCGCCGCCGCTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCGGCTATAGAAGCGGCACGCACCAATATCATTCAGGCGCAAACCCGCGTCGAAGCGGCACAAGCCACTGAACGGCGCATTGCCGCAGATATCGATGACAGCGAACTGAAAGCCCCGCGTGACGGACGCGTGCAGTATCGGGTTGCCGAGCCAGGCGAAGTGCTGGCGGCAGGCGGTCGGGTGCTGAATATGGTCGATCTCAGCGACGTCTATATGACTTTCTTCCTGCCAACCGAACAGGCGGGCACGCTGAAACTGGGCGGTGAAGCCCGGCTGATCCTCGATGCCGCGCCAGATCTGCGTATTCCTGCAACCATCAGTTTTGTCGCCAGTGTCGCCCAGTTCACGCCAAAAACCGTCGAAACCAGCGATGAACGGCTGAAACTGATGTTCCGCGTCAAAGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGACCTCGTGGTGAGGTTGCCGCAATGA", 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], + [ + "gene_synonym", + "yhiJ" + ], + [ + "gene_synonym", + "EcoGene:EG12225" + ], + [ + "gene_synonym", + "ASAP:ABE-0011387" + ], + [ + "gene_synonym", + "b3488" + ], + [ + "gene_synonym", + "GeneID:948001" + ] + ], + "dna_sequence": "ATGAAAATTGGAACTGTGGCAGGCACTAACGACAGTACAACGACAATCGCAACAAATGATATGGTGCAAGAGCATGTTACCAACTTCACTAAAGAACTGTTTGGGTATATTGCAAATGGTATAGGTGATGATATATCAAGTATTGCCAGGACAATGCTCGGTGAGGTTGTGGAAAAAATAGATGATTGGCAAATAGAACGGTTCCAACAATCTATTCAAGATGACAAAATTTCATTTACCATACAAACGGATCATTCAGAAAAATATAGTATGCTATCGGGCATGCGTGCTCATATTCTACGTAGGAATAATAATTATCAGTTTATTGTGACAATTAATAGCAAAAATTACGGTTGCTCTCTTGATAATACCGATATTAATTGGTGCAGTATTGTTTATTTACTTAATAATATGACAGTAAATGATAATGCTAATGATGTTGCAGTTACTGAGTCGTACAAACCCATCTGGAACTGGAAAATATCGCAATATAATGTATCTGATATTAAATTCGAAACAATGATAAAACCCCAGTTCGCTGACAGAATCTATTTCTCCAATTGTTTACCCGTTGATCCCACAAGTACCAGACCAACCTATTTTGGTGATACCGATGGCTCAGTCGGTGCAGTTTTGTTCGCGCTTTTCGCAACGGGACATTTGGGAATCATGGCTGAAGGAGAAAATTTCCTTAGCCAGTTGCTTAATATAGAAGATGAAGTTCTCAACGTATTGCTAAGGGAGAACTTTAATGAGCAACTTAACACTAATGTTAATACAATAATCAGTATCCTGAACAGAAGAGACATTATTTTAGAAAGTCTTCAGCCTTATTTAGTTATTAATAAAGACGCTGTGACGCCATGTACGTTTCTGGGCGACCAAACCGGCGATCGATTTAGCAATATCTGTGGTGATCAATTTATCATCGATTTGTTAAAACGCATAATGAGTATCAATGAAAATGTTCATGTATTAGCTGGAAATCATGAAACGAATTGCAATGGTAACTATATGCAGAACTTCACGCGTATGAAACCACTCGATGAGGATACCTACTCTGGGATAAAAGATTATCCTGTATGTTTCTATGACCCCAAATACAAAATAATGGCAAATCATCATGGGATAACTTTTGATGATCAGCGAAAACGTTACATTATAGGACCGATAACAGTCTCTATTGATGAAATGACCAATGCTCTCGATCCGGTCGAATTAGCGGCAATTATCAATAAAAAGCATCATGCTATAATTAATGGCAAAAAGTTTAAAACTAGCCGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAACATGCTGGAAGAATGTTCAGCATGCATAATTGCCAAATTAACCCTGGTGCAGGGCCTGAGATAACCACTCCCTGGAAGTCTTACCAGCATGAAAAAAACAGAAATGGACTTATGCCTTTGATTAGAAGGCGCACAATGTTACAGCTCTGA", 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"ASAP:ABE-0011391" + ], + [ + "gene_synonym", + "yhiL" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37629" + ], + [ + "gene_synonym", + "EcoGene:EG12227" + ], + [ + "gene_synonym", + "GeneID:947999" + ], + [ + "gene_synonym", + "yhiK" + ], + [ + "gene_synonym", + "b4660" + ], + [ + "gene_synonym", + "JW5674" + ], + [ + "gene_synonym", + "ASAP:ABE-0011393" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:947997" + ], + [ + "gene_synonym", + "EcoGene:EG12228" + ], + [ + "gene_synonym", + "ECK3476" + ], + [ + "gene_synonym", + "yhiM" + ], + [ + "gene_synonym", + "GI:226524753" + ], + [ + "gene_synonym", + "ASAP:ABE-0011400" + ], + [ + "gene_synonym", + "NP_417948.4" + ], + [ + "gene_synonym", + "JW5944" + ], + [ + "gene_synonym", + "b3491" + ] + ], + "dna_sequence": "GTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAATACGTTTTACAATACATTGTTCCCCATTATTGGCTATGCGGGGTCAATTATCACCATGATATGGGGTTGGGCACTGTTAGCAGGCAATGATGTGATGGCAGACGAGTTTGTCGCCGGCCATGTTATTTTCGGCGTTGGTATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCATTAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTACGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTCGCGGGTCACGTATTGCTTGGGTTAACCGCAATCTGTGCCTGTCTAATTGGCCTTGTTGCCACAATTGTCCATCAAACACGTAATACGTTTTCAACTAAAGAACACTGGCTGTGGTGTTATTGGGTTATTTTTCTCGGCTCAATCACGGTACTGCAGGGGATATACGTCTTAGTCAGTTCCGATGCAAGCGCCCGACTGGCTCCCGGCATTATTCTTATTTGCCTCGGAATGATCTGTTACAGCATATTCTCAAAAGTCTGGCTACTGGCACTGGTATGGAGACGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGCCTTTTCCTGGCATCGTTTCTTGCGGAAATGGCGCAGACCGACATGGGATATTTTATTCCTTCGCGAGTTCTGGTCGGTTTGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAA", 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"gene_synonym", + "ASAP:ABE-0011402" + ], + [ + "gene_synonym", + "yhiN" + ], + [ + "gene_synonym", + "JW3459" + ], + [ + "gene_synonym", + "NP_417949.1" + ], + [ + "gene_synonym", + "b3492" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK3481" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36837" + ], + [ + "gene_synonym", + "JW3463" + ], + [ + "gene_synonym", + "GI:16131368" + ], + [ + "gene_synonym", + "NP_417953.1" + ], + [ + "gene_synonym", + "dtpB" + ], + [ + "gene_synonym", + "EcoGene:EG12232" + ], + [ + "gene_synonym", + "yhiP" + ], + [ + "gene_synonym", + "ASAP:ABE-0011417" + ], + [ + "gene_synonym", + "GeneID:948006" + ], + [ + "gene_synonym", + "b3496" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16131373" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37309" + ], + [ + "gene_synonym", + "ASAP:ABE-0011435" + ], + [ + "gene_synonym", + "arsR" + ], + [ + "gene_synonym", + "EcoGene:EG12235" + ], + [ + "gene_synonym", + "b3501" + ] + ], + "dna_sequence": "ATGTCATTTCTGTTACCCATCCAATTGTTCAAAATTCTTGCTGATGAAACCCGTCTGGGCATCGTTTTACTGCTCAGCGAACTGGGAGAGTTATGCGTCTGCGATCTCTGCACTGCTCTCGACCAGTCGCAGCCCAAGATCTCCCGCCACCTGGCATTGCTGCGTGAAAGCGGGCTATTGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAA", + "dna_sequence_length": 354, + "functions": [ + "arsenical resistance operon transcriptional repressor", + "autorepressor" + ], + "id": "CDS_3438", + "location": [ + [ + "NC_000913", + 3648528, + "+", + 354 + ] + ], + "md5": "d68b457349c1336f485c57ccadb55966", + "parent_gene": "", + "protein_md5": "5476ba71ab630fd81d8d88f6bc00a531", + 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"MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTITVSATYPGADAQTVEDSVTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDIAQVQVQNKLQLAMPSLPEAVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVASNIKDPLSRTAGVGSVQLFGSEYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQLGGMPQAADQQLNASIIVQTRLQTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYSTVARYNGKPAAGIAIKLAAGANALDTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIEISIQEVFKTLVEAIILVFLVMYLFLQNFRATIIPTIAVPVVILGTFAILSAVGFTINTLTMFGMVLAIGLLVDDAIVVVENVERVIAEDKLPPKEATHKSMGQIQRALVGIAVVLSAVFMPMAFMSGATGEIYRQFSITLISSMLLSVFVAMSLTPALCATILKAAPEGGHKPNALFARFNTLFEKSTQHYTDSTRSLLRCTGRYMVVYLLICAGMAVLFLRTPTSFLPEEDQGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKEKDNVQSVFTVGGFGFSGQGQNNGLAFISLKPWSERVGEENSVTAIIQRAMIALSSINKAVVFPFNLPAVAELGTASGFDMELLDNGNLGHEKLTQARNELLSLAAQSPNQVTGVRPNGLEDTPMFKVNVNAAKAEAMGVALSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRMLPDNINQWYVRNASGTMAPLSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMKFMADLVAKLPAGVGYSWTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVMLVVPLGVVGALLATDLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPIEAIIEAARMRLRPILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFVPVFFVVVEHLFARFKKA", + "protein_translation_length": 1037, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW3483" + ], + [ + "gene_synonym", + "NP_417972.1" + ], + [ + "gene_synonym", + "ECK3499" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63201" + ], + [ + "gene_synonym", + "GI:16131387" + ], + [ + "gene_synonym", + "GeneID:948029" + ], + [ + "gene_synonym", + "yhiW" + ], + [ + "gene_synonym", + "ASAP:ABE-0011482" + ], + [ + "gene_synonym", + "gadW" + ], + [ + "gene_synonym", + "b3515" + ], + [ + "gene_synonym", + "EcoGene:EG12242" + ] + ], + "dna_sequence": 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"parent_gene": "", + "protein_md5": "2d0584b36a0ac81361ae76d80a82fcf4", + "protein_translation": "MTHVCSVILIRRSFDIYHEQQKISLHNESILLLEKNLADDFAFCSPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGTFS", + "protein_translation_length": 242, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK3501" + ], + [ + "gene_synonym", + "GI:16131388" + ], + [ + "gene_synonym", + "NP_417973.1" + ], + [ + "gene_synonym", + "JW3484" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37639" + ], + [ + "gene_synonym", + "GeneID:948028" + ], + [ + "gene_synonym", + "ASAP:ABE-0011487" + ], + [ + "gene_synonym", + "gadX" + ], + [ + "gene_synonym", + "yhiX" + ], + [ + "gene_synonym", + "b3516" + ], + [ + "gene_synonym", + "EcoGene:EG12243" + ] + ], + "dna_sequence": "ATGCAATCACTACATGGGAATTGTCTAATTGCGTATGCAAGACATAAATATATTCTCACCATGGTTAATGGTGAATATCGCTATTTTAATGGCGGTGACCTGGTTTTTGCGGATGCAAGCCAAATTCGAGTAGATAAGTGTGTTGAAAATTTTGTATTCGTGTCAAGGGACACGCTTTCATTATTTCTCCCGATGCTCAAGGAGGAGGCATTAAATCTTCATGCACATAAAAAAGTTTCTTCATTACTCGTTCATCACTGTAGTAGAGATATTCCTGTTTTTCAGGAAGTTGCGCAACTATCGCAGAATAAGAATCTTCGCTATGCAGAAATGCTACGTAAAAGAGCATTAATCTTTGCGTTGTTATCTGTTTTTCTTGAGGATGAGCACTTTATACCGCTGCTTCTGAACGTTTTACAACCGAACATGCGAACACGAGTTTGTACGGTTATCAATAATAATATCGCCCATGAGTGGACACTAGCCCGAATCGCCAGCGAGCTGTTGATGAGTCCAAGTCTGTTAAAGAAAAAATTGCGCGAAGAAGAGACATCATATTCACAGTTGCTTACTGAGTGTAGAATGCAACGTGCTTTGCAACTTATTGTTATACATGGTTTTTCAATTAAGCGAGTTGCAGTATCCTGTGGATATCACAGCGTGTCGTATTTCATTTACGTCTTTCGAAATTATTATGGGATGACGCCCACAGAGTATCAGGAGCGATCGGCGCAGAGATTGTCGAACCGTGACTCGGCGGCAAGTATTGTTGCGCAAGGGAATTTTTACGGCACTGACCGTTCTGCGGAAGGAATAAGATTATAG", + "dna_sequence_length": 825, + "functions": [ + "acid resistance regulon transcriptional activator", + "autoactivator" + ], + "id": "CDS_3453", + "location": [ + [ + "NC_000913", + 3665810, + "-", + 825 + ] + ], + "md5": "17641557eb2755f182f461cef847e618", + "parent_gene": "", + "protein_md5": "231dd8666a5a46d071509482027df3cd", + "protein_translation": "MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69908" + ], + [ + "gene_synonym", + "ECK3502" + ], + [ + "gene_synonym", + "EcoGene:EG50009" + ], + [ + "gene_synonym", + "GI:16131389" + ], + [ + "gene_synonym", + "JW3485" + ], + [ + "gene_synonym", + "GeneID:948027" + ], + [ + "gene_synonym", + "gadA" + ], + [ + "gene_synonym", + "NP_417974.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0011490" + ], + [ + "gene_synonym", + "b3517" + ], + [ + "gene_synonym", + "gadS" + ] + ], + "dna_sequence": "ATGGACCAGAAGCTGTTAACGGATTTCCGCTCAGAACTACTCGATTCACGTTTTGGCGCAAAGGCCATTTCTACTATCGCGGAGTCAAAACGATTTCCGCTGCACGAAATGCGCGATGATGTCGCATTTCAGATTATCAATGATGAATTATATCTTGATGGCAACGCTCGTCAGAACCTGGCCACTTTCTGCCAGACCTGGGACGACGAAAACGTCCATAAATTGATGGATTTGTCGATCAATAAAAACTGGATCGACAAAGAAGAATATCCGCAATCCGCAGCCATCGACCTGCGTTGCGTAAATATGGTTGCCGATCTGTGGCATGCGCCTGCGCCGAAAAATGGTCAGGCCGTTGGCACCAACACCATTGGTTCTTCCGAGGCCTGTATGCTCGGCGGGATGGCGATGAAATGGCGTTGGCGCAAGCGTATGGAAGCTGCAGGCAAACCAACGGATAAACCAAACCTGGTGTGCGGTCCGGTACAAATCTGCTGGCATAAATTCGCCCGCTACTGGGATGTGGAGCTGCGTGAGATCCCTATGCGCCCCGGTCAGTTGTTTATGGACCCGAAACGCATGATTGAAGCCTGTGACGAAAACACCATCGGCGTGGTGCCGACTTTCGGCGTGACCTACACCGGTAACTATGAGTTCCCACAACCGCTGCACGATGCGCTGGATAAATTCCAGGCCGACACCGGTATCGACATCGACATGCACATCGACGCTGCCAGCGGTGGCTTCCTGGCACCGTTCGTCGCCCCGGATATCGTCTGGGACTTCCGCCTGCCGCGTGTGAAATCGATCAGTGCTTCAGGCCATAAATTCGGTCTGGCTCCGCTGGGCTGCGGCTGGGTTATCTGGCGTGACGAAGAAGCGCTGCCGCAGGAACTGGTGTTCAACGTTGACTACCTGGGTGGTCAAATTGGTACTTTTGCCATCAACTTCTCCCGCCCGGCGGGTCAGGTAATTGCACAGTACTATGAATTCCTGCGCCTCGGTCGTGAAGGCTATACCAAAGTACAGAACGCCTCTTACCAGGTTGCCGCTTATCTGGCGGATGAAATCGCCAAACTGGGGCCGTATGAGTTCATCTGTACGGGTCGCCCGGACGAAGGCATCCCGGCGGTTTGCTTCAAACTGAAAGATGGTGAAGATCCGGGATACACCCTGTACGACCTCTCTGAACGTCTGCGTCTGCGCGGCTGGCAGGTTCCGGCCTTCACTCTCGGCGGTGAAGCCACCGACATCGTGGTGATGCGCATTATGTGTCGTCGCGGCTTCGAAATGGACTTTGCTGAACTGTTGCTGGAAGACTACAAAGCCTCCCTGAAATATCTCAGCGATCACCCGAAACTGCAGGGTATTGCCCAGCAGAACAGCTTTAAACACACCTGA", 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[ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37197" + ], + [ + "gene_synonym", + "yhjA" + ], + [ + "gene_synonym", + "GeneID:948038" + ], + [ + "gene_synonym", + "GI:16131390" + ], + [ + "gene_synonym", + "b3518" + ], + [ + "gene_synonym", + "EcoGene:EG12244" + ], + [ + "gene_synonym", + "ASAP:ABE-0011493" + ] + ], + "dna_sequence": "ATGAAAATGGTCTCACGTATTACCGCGATCGGCCTGGCTGGCGTCGCGATTTGCTATTTAGGGTTATCTGGTTATGTGTGGTACCACGATAATAAACGCAGTAAACAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGAAAAAGGATGCGACTATTGCCACACGCCTTCGGCAGAATTACCCGCCTATTATTATATTCCTGGCGCGAAACAGTTGATGGATTACGACATTAAGCTTGGATATAAATCTTTTAACCTTGAGGCCGTGCGTGCGGCACTGCTGGCTGATAAACCCGTTTCGCAAAGCGATTTGAATAAGATTGAATGGGTGATGCAGTATGAAACTATGCCACCAACGCGTTATACCGCGCTACACTGGGCGGGTAAGGTGAGTGATGAAGAGCGGGCGGAAATACTGGCCTGGATTGCAAAACAGCGCGCGGAATATTACGCCAGCAATGATACTGCTCCGGAACATCGCAATGAACCGGTGCAGCCCATCCCGCAAAAACTGCCTACCGATGCGCAAAAAGTGGCGTTGGGTTTTGCGCTGTATCACGATCCCCGTTTATCGGCTGATAGCACCATTTCATGCGCTCATTGCCATGCGTTGAATGCGGGGGGCGTCGATGGCAGAAAAACATCGATTGGTGTTGGTGGCGCAGTTGGGCCGATTAACGCGCCGACGGTATTTAACTCAGTATTTAACGTTGAGCAGTTCTGGGATGGTCGTGCGGCAACATTGCAGGATCAGGCTGGTGGACCGCCGTTGAACCCGATTGAAATGGCGTCGAAATCCTGGGACGAAATTATTGCTAAGCTGGAAAAAGATCCGCAGCTTAAAACGCAGTTCCTCGAAGTCTATCCGCAAGGTTTCAGTGGCGAAAATATTACTGATGCCATTGCTGAATTTGAGAAAACATTAATTACGCCGGATTCCCCATTTGATAAATGGTTGCGCGGAGATGAAAATGCGCTGACGGCGCAACAGAAAAAAGGCTATCAATTATTTAAAGATAATAAATGTGCAACTTGTCATGGTGGTATTATTCTCGGCGGACGTTCCTTTGAACCGTTGGGGCTGAAAAAAGACTTTAACTTTGGGGAAATTACGGCGGCGGATATTGGTCGTATGAATGTGACTAAAGAAGAGCGTGATAAATTGCGTCAGAAAGTACCCGGTTTACGTAACGTTGCTTTAACGGCACCGTACTTCCATCGCGGTGACGTGCCGACGCTGGACGGGGCGGTGAAACTGATGCTGCGCTATCAGGTAGGCAAAGAGCTGCCGCAGGAGGATGTGGATGATATCGTAGCTTTCCTGCACAGTCTGAACGGGGTGTACACGCCGTATATGCAGGATAAACAATAA", + "dna_sequence_length": 1398, + "functions": [ + "putative cytochrome C peroxidase" + ], + "id": "CDS_3455", + "location": [ + [ + "NC_000913", + 3669188, + "-", + 1398 + ] + ], + "md5": "fd659a9947c5c2107d20b6353fae23f9", + "parent_gene": "", + "protein_md5": "95804d582c3fa91c2361e84073f42252", + "protein_translation": "MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAVSENNKVLGFLREKGCDYCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAALLADKPVSQSDLNKIEWVMQYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYASNDTAPEHRNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVFNSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSWDEIIAKLEKDPQLKTQFLEVYPQGFSGENITDAIAEFEKTLITPDSPFDKWLRGDENALTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQKVPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFLHSLNGVYTPYMQDKQ", + "protein_translation_length": 465, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:948037" + ], + [ + "gene_synonym", + "ECK3504" + ], + [ + "gene_synonym", + "JW3487" + ], + [ + "gene_synonym", + "NP_417976.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62601" + ], + [ + "gene_synonym", + "GI:16131391" + ], + [ + "gene_synonym", + "treF" + ], + [ + "gene_synonym", + "b3519" + ], + [ + "gene_synonym", + "EcoGene:EG12245" + ], + [ + "gene_synonym", + "ASAP:ABE-0011497" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK3505" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37640" + ], + [ + "gene_synonym", + "JW3488" + ], + [ + "gene_synonym", + "GI:16131392" + ], + [ + "gene_synonym", + "yhjB" + ], + [ + "gene_synonym", + "ASAP:ABE-0011499" + ], + [ + "gene_synonym", + "b3520" + ], + [ + "gene_synonym", + "NP_417977.1" + ], + [ + "gene_synonym", + "EcoGene:EG12246" + ] + ], + "dna_sequence": 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"MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNISS", + "protein_translation_length": 200, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:948035" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37641" + ], + [ + "gene_synonym", + "ECK3506" + ], + [ + "gene_synonym", + "NP_417978.2" + ], + [ + "gene_synonym", + "JW3489" + ], + [ + "gene_synonym", + "yhjC" + ], + [ + "gene_synonym", + "b3521" + ], + [ + "gene_synonym", + "GI:145698322" + ], + [ + "gene_synonym", + "ASAP:ABE-0011503" + ], + [ + "gene_synonym", + "EcoGene:EG12247" + ] + ], + "dna_sequence": 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regulator" + ], + "id": "CDS_3458", + "location": [ + [ + "NC_000913", + 3672414, + "+", + 900 + ] + ], + "md5": "96717ecb53670c877b71a7cd0aacb3f1", + "parent_gene": "", + "protein_md5": "665b1496a8dda2ff4cab136ee69e47cd", + "protein_translation": "MDKIHAMQLFIKVAELESFSRAADFFALPKGSVSRQIQALEHQLGTQLLQRTTRRVKLTPEGMTYYQRAKDVLSNLSELDGLFQQDATSISGKLRIDIPPGIAKSLLLPRLSEFLYLHPGIELELSSHDRPVDILHDGFDCVIRTGALPEDGVIARPLGKLTMVNCASPHYLTRFGYPQSPDDLTSHAIVRYTPHLGVHPLGFEVASVNGVQWFKSGGMLTVNSSENYLTAGLAGLGIIQIPRIAVREALRAGRLIEVLPGYRAEPLSLSLVYPQRRELSRRVNLFMQWLAGVMKEYLD", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW3490" + ], + [ + "gene_synonym", + "GeneID:948033" + ], + [ + "gene_synonym", + "ECK3507" + ], + [ + "gene_synonym", + "yhjD" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37642" + ], + [ + "gene_synonym", + "GI:16131394" + ], + [ + "gene_synonym", + "NP_417979.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0011505" + ], + [ + "gene_synonym", 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"yhjF" + ], + [ + "gene_synonym", + "GI:226524754" + ], + [ + "gene_synonym", + "NP_417981.2" + ], + [ + "gene_synonym", + "GeneID:948043" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37645" + ], + [ + "gene_synonym", + "b3524" + ], + [ + "gene_synonym", + "ASAP:ABE-0011512" + ], + [ + "gene_synonym", + "EcoGene:EG12251" + ] + ], + "dna_sequence": 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"JW5668" + ], + [ + "gene_synonym", + "NP_417983.2" + ], + [ + "gene_synonym", + "ASAP:ABE-0011519" + ], + [ + "gene_synonym", + "GI:90111606" + ] + ], + "dna_sequence": 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"2-dehydro-3-deoxygluconokinase" + ], + "id": "CDS_3463", + "location": [ + [ + "NC_000913", + 3679419, + "+", + 930 + ] + ], + "md5": "0617e06b8483f3d8b0e8889005ef3dff", + "parent_gene": "", + "protein_md5": "d1b9a14cf123ec8d34db0242ae100040", + "protein_translation": "MSKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLESEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAGEGLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAEDAAKRGHLTASTVIQYRGAIIPREAMPA", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK3512" + ], + [ + "gene_synonym", + "JW3495" + ], + [ + "gene_synonym", + "GI:16131399" + ], + [ + "gene_synonym", + "yhjJ" + ], + [ + "gene_synonym", + "NP_417984.1" + ], + [ + "gene_synonym", + "GeneID:948040" + ], + [ + "gene_synonym", + "b3527" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37648" + ], 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+ "protein_translation_length": 1157, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yhjM" + ], + [ + "gene_synonym", + "ECK3516" + ], + [ + "gene_synonym", + "JW3499" + ], + [ + "gene_synonym", + "bcsZ" + ], + [ + "gene_synonym", + "EcoGene:EG12258" + ], + [ + "gene_synonym", + "NP_417988.1" + ], + [ + "gene_synonym", + "b3531" + ], + [ + "gene_synonym", + "bcsC" + ], + [ + "gene_synonym", + "GeneID:948046" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37651" + ], + [ + "gene_synonym", + "GI:16131403" + ], + [ + "gene_synonym", + "ASAP:ABE-0011541" + ] + ], + "dna_sequence": "ATGAATGTGTTGCGTAGTGGAATCGTGACGATGCTGCTGCTGGCTGCCTTTAGTGTTCAGGCAGCCTGTACCTGGCCTGCCTGGGAGCAGTTTAAAAAGGATTACATCAGTCAGGAAGGGCGCGTCATCGACCCCAGCGACGCGCGCAAAATCACCACCTCCGAAGGGCAAAGTTACGGCATGTTCTCTGCCCTGGCGGCTAACGACCGTGCAGCTTTCGATAATATTCTCGACTGGACGCAGAACAATCTCGCTCAGGGTTCTTTAAAAGAACGTTTGCCCGCCTGGCTGTGGGGCAAGAAAGAGAACAGTAAGTGGGAAGTGCTGGACAGCAATTCGGCCTCCGATGGTGATGTCTGGATGGCCTGGTCGTTGCTGGAGGCGGGGCGTTTGTGGAAAGAGCAGCGTTATACCGACATCGGCAGCGCGTTGCTAAAACGTATCGCGCGGGAGGAAGTGGTGACGGTGCCTGGGCTGGGTTCCATGTTGTTACCGGGCAAAGTGGGTTTTGCTGAGGATAACAGCTGGCGTTTTAACCCCAGCTACCTGCCGCCGACGCTGGCGCAGTATTTCACCCGCTTTGGCGCGCCGTGGACCACGCTGCGCGAAACCAATCAACGTTTATTGCTGGAAACCGCCCCGAAAGGTTTTTCGCCAGACTGGGTGCGCTATGAGAAAGACAAAGGCTGGCAGCTAAAAGCCGAAAAAACATTGATCAGCAGCTACGACGCTATCCGCGTTTACATGTGGGTAGGCATGATGCCTGACAGCGATCCGCAAAAAGCGCGGATGCTCAACCGGTTTAAACCGATGGCGACATTCACTGAGAAAAACGGTTATCCGCCGGAAAAAGTGGATGTGGCTACGGGGAAAGCGCAGGGTAAAGGACCAGTCGGTTTTTCTGCCGCCATGCTGCCCTTTTTACAAAACCGCGATGCGCAGGCCGTTCAGCGCCAGCGCGTGGCCGATAACTTTCCCGGCAGCGATGCCTATTACAACTATGTGCTGACCCTGTTTGGACAAGGCTGGGATCAACACCGTTTCCGCTTCTCGACAAAAGGTGAGTTATTACCTGACTGGGGCCAGGAATGCGCAAATTCACACTAA", + "dna_sequence_length": 1107, + "functions": [ + "endo-1,4-D-glucanase" + ], + "id": "CDS_3468", + "location": [ + [ + "NC_000913", + 3690261, + "-", + 1107 + ] + ], + "md5": "d8793093ea7609ff15bf5f9476e9deec", + "parent_gene": "", + "protein_md5": "7eb98f05ae6512139ad72350ab25dbdf", + "protein_translation": "MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYGMFSALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH", + "protein_translation_length": 368, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yhjN" + ], + [ + "gene_synonym", + "ECK3517" + ], + [ + "gene_synonym", + "GeneID:948045" + ], + [ + "gene_synonym", + "ASAP:ABE-0011545" + ], + [ + "gene_synonym", + "b3532" + ], + [ + "gene_synonym", + "bcsB" + ], 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"MKRKLFWICAVAMGMSAFPSFMTQATPATQPLINAEPAVAAQTEQNPQVGQVMPGVQGADAPVVAQNGPSRDVKLTFAQIAPPPGSMVLRGINPNGSIEFGMRSDEVVTKAMLNLEYTPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQMPINPLFISDFNRVRLEFVGHYQDVCEKPASTTLWLDVGRSSGLDLTYQTLNVKNDLSHFPVPFFDPSDNRTNTLPMVFAGAPDVGLQQASAIVASWFGSRSGWRGQNFPVLYNQLPDRNAIVFATNDKRPDFLRDHPAVKAPVIEMINHPQNPYVKLLVVFGRDDKDLLQAAKGIAQGNILFRGESVVVNEVKPLLPRKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAAINVSLNLPPDLYLMRSTGIDMDINYRYTMPPVKDSSRMDISLNNQFLQSFNLSSKQEANRLLLRIPVLQGLLDGKTDVSIPALKLGATNQLRFDFEYMNPMPGGSVDNCITFQPVQNHVVIGDDSTIDFSKYYHFIPMPDLRAFANAGFPFSRMADLSQTITVMPKAPNEAQMETLLNTVGFIGAQTGFPAINLTVTDDGSTIQGKDADIMIIGGIPDKLKDDKQIDLLVQATESWVKTPMRQTPFPGIVPDESDRAAETRSTLTSSGAMAAVIGFQSPYNDQRSVIALLADSPRGYEMLNDAVNDSGKRATMFGSVAVIRESGINSLRVGDVYYVGHLPWFERVWYALANHPILLAVLAAISVILLAWVLWRLLRIISRRRLNPDNE", + "protein_translation_length": 779, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yhjO" + ], + [ + "gene_synonym", + "b3533" + ], + [ + "gene_synonym", + "ECK3518" + ], + [ + "gene_synonym", + "ASAP:ABE-0011547" + ], + [ + "gene_synonym", + "GI:90111609" + ], + [ + "gene_synonym", + "bcsA" + ], + [ + "gene_synonym", + "GeneID:948053" + ], + [ + "gene_synonym", + "JW5665" + ], + [ + "gene_synonym", + "EcoGene:EG12260" + ], + [ + "gene_synonym", + "NP_417990.4" + ], + [ + "gene_synonym", + "yhjP" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37653" + ] + ], + "dna_sequence": "ATGAGTATCCTGACCCGGTGGTTGCTTATCCCGCCGGTCAACGCGCGGCTTATCGGGCGTTATCGCGATTATCGTCGTCACGGTGCGTCGGCTTTCAGCGCGACGCTCGGCTGTTTCTGGATGATCCTGGCCTGGATTTTTATTCCGCTGGAGCACCCGCGCTGGCAGCGTATTCGCGCAGAACATAAAAACCTGTATCCGCATATCAACGCCTCGCGTCCGCGTCCGCTGGACCCGGTCCGTTATCTCATTCAAACATGCTGGTTATTGATCGGTGCATCGCGCAAAGAAACGCCGAAACCGCGCAGGCGGGCATTTTCAGGTCTGCAAAATATTCGTGGACGTTACCATCAATGGATGAACGAGCTGCCTGAGCGCGTTAGCCATAAAACACAGCATCTGGATGAGAAAAAAGAGCTCGGTCATTTGAGTGCCGGGGCGCGGCGGTTGATCCTCGGTATCATCGTCACCTTCTCGCTGATTCTGGCGTTAATCTGCGTTACTCAGCCGTTTAACCCGCTGGCGCAGTTTATCTTCCTGATGCTGCTGTGGGGGGTAGCGCTGATCGTACGGCGGATGCCGGGGCGCTTCTCGGCGCTAATGTTGATTGTGCTGTCGCTGACCGTTTCTTGCCGTTATATCTGGTGGCGTTACACCTCTACGCTGAACTGGGACGATCCGGTCAGCCTGGTGTGCGGGCTTATTCTGCTCTTCGCTGAAACGTACGCGTGGATTGTGCTGGTGCTCGGCTACTTCCAGGTAGTATGGCCGCTGAATCGTCAGCCGGTGCCATTGCCGAAAGATATGTCGCTGTGGCCGTCGGTGGATATCTTTGTCCCGACTTACAACGAAGATCTCAACGTGGTGAAAAATACCATTTACGCCTCGCTGGGTATCGACTGGCCGAAAGATAAGCTGAATATCTGGATCCTTGATGACGGCGGCAGGGAAGAGTTTCGCCAGTTTGCGCAAAACGTGGGGGTGAAATATATCGCCCGCACCACTCATGAACATGCGAAAGCAGGCAACATCAACAATGCGCTGAAATATGCCAAAGGCGAGTTCGTGTCGATTTTCGACTGCGACCACGTACCAACGCGATCGTTCTTGCAAATGACCATGGGCTGGTTCCTGAAAGAAAAACAGCTGGCGATGATGCAGACGCCGCACCACTTCTTCTCACCGGACCCGTTTGAACGCAACCTGGGGCGTTTCCGTAAAACGCCGAACGAAGGCACGCTGTTCTATGGTCTGGTGCAGGATGGCAACGATATGTGGGACGCCACTTTCTTCTGCGGTTCCTGTGCGGTGATTCGTCGTAAGCCGCTGGATGAAATTGGCGGCATTGCTGTCGAAACCGTGACTGAAGATGCGCATACTTCTCTGCGGTTGCACCGTCGTGGCTATACCTCCGCGTATATGCGTATTCCGCAGGCGGCGGGGCTGGCGACCGAAAGTCTGTCGGCGCATATCGGTCAGCGTATTCGCTGGGCGCGCGGGATGGTACAAATCTTCCGTCTCGATAACCCGCTCACCGGTAAAGGGCTGAAGTTTGCTCAGCGGCTATGTTACGTCAACGCCATGTTCCACTTCTTGTCGGGCATTCCACGGCTGATCTTCCTGACTGCGCCGCTGGCGTTCCTGCTGCTTCATGCCTACATCATCTATGCGCCAGCGTTGATGATCGCCCTATTCGTGCTGCCGCATATGATCCATGCCAGCCTGACCAACTCCAAGATCCAGGGCAAATATCGCCACTCTTTCTGGAGTGAAATCTACGAAACGGTGCTGGCGTGGTATATCGCACCACCGACGCTGGTGGCGCTGATTAACCCGCACAAAGGCAAATTTAACGTCACCGCCAAAGGTGGACTGGTGGAAGAAGAGTACGTCGACTGGGTGATCTCGCGGCCCTACATCTTCCTTGTCCTGCTCAACCTGGTGGGCGTTGCGGTAGGCATCTGGCGCTACTTCTATGGCCCGCCAACCGAGATGCTCACCGTGGTCGTCAGTATGGTGTGGGTGTTCTACAACCTGATTGTTCTTGGCGGCGCAGTTGCGGTATCGGTAGAAAGCAAACAGGTACGCCGATCGCACCGCGTGGAGATGACGATGCCCGCGGCAATTGCCCGCGAAGATGGTCACCTCTTCTCGTGTACCGTTCAGGATTTCTCCGACGGTGGTTTGGGGATCAAGATCAACGGTCAGGCGCAGATTCTGGAAGGGCAGAAAGTGAATCTGTTGCTTAAACGCGGTCAGCAGGAATACGTCTTCCCGACCCAGGTGGCGCGCGTGATGGGTAATGAAGTTGGGCTGAAATTAATGCCGCTCACCACCCAGCAACATATCGATTTTGTGCAGTGTACGTTTGCCCGTGCGGATACATGGGCGCTCTGGCAGGACAGCTACCCGGAAGATAAGCCGCTGGAAAGTCTGCTGGATATTCTGAAGCTCGGCTTCCGTGGCTACCGCCATCTGGCGGAGTTTGCGCCTTCTTCGGTGAAGGGCATATTCCGTGTGCTGACTTCTCTGGTTTCCTGGGTTGTATCGTTTATTCCGCGCCGCCCGGAGCGGAGCGAAACGGCACAACCATCGGATCAGGCTTTGGCTCAACAATGA", 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"gene_synonym", + "ASAP:ABE-0011549" + ], + [ + "gene_synonym", + "ECK3519" + ], + [ + "gene_synonym", + "JW5941" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37655" + ], + [ + "gene_synonym", + "GeneID:948052" + ], + [ + "gene_synonym", + "b3534" + ], + [ + "gene_synonym", + "EcoGene:EG12261" + ], + [ + "gene_synonym", + "yhjQ" + ] + ], + "dna_sequence": 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"ECK3522" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADJ5" + ], + [ + "gene_synonym", + "ASAP:ABE-0011556" + ], + [ + "gene_synonym", + "EcoGene:EG12264" + ], + [ + "gene_synonym", + "JW5663" + ], + [ + "gene_synonym", + "b3537" + ], + [ + "gene_synonym", + "bcsF" + ], + [ + "gene_synonym", + "NP_417994.2" + ], + [ + "gene_synonym", + "yhjT" + ], + [ + "gene_synonym", + "GI:90111610" + ] + ], + "dna_sequence": "ATGATGACCATCAGCGATATCATTGAAATTATTGTCGTTTGCGCACTGATATTTTTCCCGCTGGGCTATCTGGCGCGGCACTCTTTGCGACGCATTCGCGACACCTTACGTTTGTTCTTTGCTAAACCTCGTTATGTTAAACCGGCCGGGACGTTACGCCGCACGGAAAAAGCCAGGGCAACCAAAAAATGA", + "dna_sequence_length": 192, + "functions": [ + "DUF2636 family cellulose production small membrane protein" + ], + "id": "CDS_3474", + "location": [ + [ + "NC_000913", + 3698026, + "+", + 192 + ] + ], + "md5": "a58b47d10a58c9618e4195c7070d564d", + "parent_gene": "", + "protein_md5": "2e6477a5828faa4bb31e32492e007a94", + "protein_translation": 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"UniProtKB/Swiss-Prot:P23847" + ], + [ + "gene_synonym", + "b3544" + ], + [ + "gene_synonym", + "fpp" + ], + [ + "gene_synonym", + "JW3513" + ], + [ + "gene_synonym", + "GeneID:948062" + ], + [ + "gene_synonym", + "alu" + ], + [ + "gene_synonym", + "GI:16131416" + ], + [ + "gene_synonym", + "EcoGene:EG10248" + ] + ], + "dna_sequence": 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"ATGCAAAAGTTTGATACCAGGACCTTCCAGGGCTTGATCCTGACCTTACAGGATTACTGGGCTCGCCAGGGCTGCACCATTGTTCAACCATTGGACATGGAAGTCGGCGCGGGAACCTCTCACCCAATGACCTGTCTGCGCGAGCTGGGGCCAGAACCGATGGCGGCTGCTTATGTTCAGCCTTCTCGTCGCCCGACCGATGGTCGCTACGGCGAAAACCCCAACCGTTTACAGCACTACTATCAGTTCCAGGTGGTCATTAAGCCATCGCCGGACAATATTCAGGAGCTGTACCTCGGTTCTCTGAAAGAGCTGGGCATGGACCCGACTATTCACGACATCCGTTTCGTGGAAGATAACTGGGAAAACCCGACGCTGGGTGCCTGGGGACTGGGCTGGGAAGTGTGGCTGAACGGCATGGAAGTGACGCAGTTCACTTACTTCCAGCAGGTTGGTGGTCTGGAGTGTAAACCGGTTACCGGCGAGATCACCTACGGTCTGGAACGTCTGGCCATGTACATTCAGGGCGTAGACAGCGTTTACGACCTGGTCTGGAGCGACGGCCCGCTGGGTAAAACCACCTACGGCGACGTGTTCCATCAGAACGAAGTGGAGCAGTCCACTTACAACTTCGAATACGCGGATGTGGACTTCCTGTTCACCTGCTTCGAGCAGTACGAGAAAGAAGCGCAGCAGCTGCTGGCGCTGGAAAATCCGCTGCCGCTGCCAGCCTACGAGCGTATTCTGAAAGCCGCCCACAGCTTCAACCTGCTGGATGCGCGTAAAGCCATCTCCGTCACCGAGCGTCAGCGCTACATTCTGCGCATTCGCACCCTGACCAAAGCAGTGGCAGAAGCATACTACGCTTCCCGTGAAGCCCTCGGCTTCCCGATGTGCAACAAAGATAAGTAA", + "dna_sequence_length": 912, + "functions": [ + "glycine tRNA synthetase, alpha 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"gene_synonym", + "yiaA" + ], + [ + "gene_synonym", + "GeneID:948078" + ], + [ + "gene_synonym", + "EcoGene:EG11186" + ], + [ + "gene_synonym", + "GI:90111616" + ], + [ + "gene_synonym", + "ECK3551" + ] + ], + "dna_sequence": "ATGGACAACAAAATATCAACCTATTCACCGGCCTTTAGTATTGTGTCATGGATAGCTCTCGTTGGTGGTATCGTTACCTATCTGTTAGGGCTATGGAATGCAGAGATGCAGTTAAATGAAAAAGGATATTATTTTGCCGTACTGGTATTAGGACTGTTTTCTGCGGCGTCTTATCAAAAGACCGTTCGGGACAAGTATGAAGGCATACCGACCACTTCCATTTATTATATGACCTGCCTGACTGTCTTTATTATCTCTGTTGCATTACTGATGGTAGGTCTGTGGAATGCGACATTATTACTCAGCGAAAAAGGTTTTTATGGACTGGCTTTCTTCTTAAGCTTGTTTGGTGCAGTAGCGGTGCAGAAAAATATTCGTGATGCCGGAATAAACCCACCAAAAGAAACACAGGTTACCCAGGAAGAATACAGCGAATAA", + "dna_sequence_length": 438, + "functions": [ + "YiaAB family inner membrane protein, tandem domains" + ], + "id": "CDS_3502", + "location": [ + [ + "NC_000913", + 3727361, + "-", + 438 + ] + ], + "md5": "7328da6b1107d9cd5ebf7780281923dd", + "parent_gene": "", + "protein_md5": "442cacac4b05bd9bbbd47ce5e97f840e", + "protein_translation": "MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE", + "protein_translation_length": 145, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011634" + ], + [ + "gene_synonym", + "NP_418020.2" + ], + [ + "gene_synonym", + "b3563" + ], + [ + "gene_synonym", + "JW5654" + ], + [ + "gene_synonym", + "yiaB" + ], + [ + "gene_synonym", + "GeneID:948152" + ], + [ + "gene_synonym", + "GI:90111617" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11286" + ], + [ + "gene_synonym", + "EcoGene:EG11267" + ], + [ + "gene_synonym", + "ECK3552" + ] + ], + "dna_sequence": "ATGAAAACCTCAAAGACTGTGGCAAAACTATTATTTGTTGTCGGGGCGCTGGTTTATCTGGTTGGGCTATGGATCTCATGCCCATTGTTAAGTGGAAAAGGCTATTTTCTTGGCGTGTTAATGACAGCAACTTTTGGCAACTATGCATATCTTCGCGCAGAAAAACTCGGGCAACTGGATGATTTTTTTACCCATATCTGCCAGTTAGTTGCGTTAATCACTATCGGTCTCTTGTTTATCGGTGTTTTAAACGCACCTATCAATACTTATGAAATGGTGATCTATCCCATCGCCTTTTTTGTCTGCTTGTTTGGTCAAATGCGTTTGTTTCGCTCGGCATGA", + "dna_sequence_length": 342, + "functions": [ + "YiaAB family inner membrane protein" + ], + "id": "CDS_3503", + "location": [ + [ + "NC_000913", + 3727748, + "-", + 342 + ] + ], + "md5": "22f13afe33fa163db21807b9b80bec88", + "parent_gene": "", + "protein_md5": "b35b745ff72ec9fc3114a4af1c25c91f", + "protein_translation": "MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLDDFFTHICQLVALITIGLLFIGVLNAPINTYEMVIYPIAFFVCLFGQMRLFRSA", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011637" + ], + [ + "gene_synonym", + "b3564" + ], + [ + "gene_synonym", + "JW3536" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09099" + ], + [ + "gene_synonym", + "GeneID:948133" + ], + [ + "gene_synonym", + "EcoGene:EG11075" + ], + [ + "gene_synonym", + "GI:16131435" + ], + [ + "gene_synonym", + "xylB" + ], + [ + "gene_synonym", + "ECK3553" + ], + [ + "gene_synonym", + "NP_418021.1" + ] + ], + "dna_sequence": "ATGTATATCGGGATAGATCTTGGCACCTCGGGCGTAAAAGTTATTTTGCTCAACGAGCAGGGTGAGGTGGTTGCTGCGCAAACGGAAAAGCTGACCGTTTCGCGCCCGCATCCACTCTGGTCGGAACAAGACCCGGAACAGTGGTGGCAGGCAACTGATCGCGCAATGAAAGCTCTGGGCGATCAGCATTCTCTGCAGGACGTTAAAGCATTGGGTATTGCCGGCCAGATGCACGGAGCAACCTTGCTGGATGCTCAGCAACGGGTGTTACGCCCTGCCATTTTGTGGAACGACGGGCGCTGTGCGCAAGAGTGCACTTTGCTGGAAGCGCGAGTTCCGCAATCGCGGGTGATTACCGGCAACCTGATGATGCCCGGATTTACTGCGCCTAAATTGCTATGGGTTCAGCGGCATGAGCCGGAGATATTCCGTCAAATCGACAAAGTATTATTACCGAAAGATTACTTGCGTCTGCGTATGACGGGGGAGTTTGCCAGCGATATGTCTGACGCAGCTGGCACCATGTGGCTGGATGTCGCAAAGCGTGACTGGAGTGACGTCATGCTGCAGGCTTGCGACTTATCTCGTGACCAGATGCCCGCATTATACGAAGGCAGCGAAATTACTGGTGCTTTGTTACCTGAAGTTGCGAAAGCGTGGGGTATGGCGACGGTGCCAGTTGTCGCAGGCGGTGGCGACAATGCAGCTGGTGCAGTTGGTGTGGGAATGGTTGATGCTAATCAGGCAATGTTATCGCTGGGGACGTCGGGGGTCTATTTTGCTGTCAGCGAAGGGTTCTTAAGCAAGCCAGAAAGCGCCGTACATAGCTTTTGCCATGCGCTACCGCAACGTTGGCATTTAATGTCTGTGATGCTGAGTGCAGCGTCGTGTCTGGATTGGGCCGCGAAATTAACCGGCCTGAGCAATGTCCCAGCTTTAATCGCTGCAGCTCAACAGGCTGATGAAAGTGCCGAGCCAGTTTGGTTTCTGCCTTATCTTTCCGGCGAGCGTACGCCACACAATAATCCCCAGGCGAAGGGGGTTTTCTTTGGTTTGACTCATCAACATGGCCCCAATGAACTGGCGCGAGCAGTGCTGGAAGGCGTGGGTTATGCGCTGGCAGATGGCATGGATGTCGTGCATGCCTGCGGTATTAAACCGCAAAGTGTTACGTTGATTGGGGGCGGGGCGCGTAGTGAGTACTGGCGTCAGATGCTGGCGGATATCAGCGGTCAGCAGCTCGATTACCGTACGGGGGGGGATGTGGGGCCAGCACTGGGCGCAGCAAGGCTGGCGCAGATCGCGGCGAATCCAGAGAAATCGCTCATTGAATTGTTGCCGCAACTACCGTTAGAACAGTCGCATCTACCAGATGCGCAGCGTTATGCCGCTTATCAGCCACGACGAGAAACGTTCCGTCGCCTCTATCAGCAACTTCTGCCATTAATGGCGTAA", 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"b3565" + ], + [ + "gene_synonym", + "ASAP:ABE-0011639" + ], + [ + "gene_synonym", + "JW3537" + ], + [ + "gene_synonym", + "GeneID:948141" + ], + [ + "gene_synonym", + "EcoGene:EG11074" + ], + [ + "gene_synonym", + "GI:16131436" + ], + [ + "gene_synonym", + "xylA" + ], + [ + "gene_synonym", + "ECK3554" + ] + ], + "dna_sequence": "ATGCAAGCCTATTTTGACCAGCTCGATCGCGTTCGTTATGAAGGCTCAAAATCCTCAAACCCGTTAGCATTCCGTCACTACAATCCCGACGAACTGGTGTTGGGTAAGCGTATGGAAGAGCACTTGCGTTTTGCCGCCTGCTACTGGCACACCTTCTGCTGGAACGGGGCGGATATGTTTGGTGTGGGGGCGTTTAATCGTCCGTGGCAGCAGCCTGGTGAGGCACTGGCGTTGGCGAAGCGTAAAGCAGATGTCGCATTTGAGTTTTTCCACAAGTTACATGTGCCATTTTATTGCTTCCACGATGTGGATGTTTCCCCTGAGGGCGCGTCGTTAAAAGAGTACATCAATAATTTTGCGCAAATGGTTGATGTCCTGGCAGGCAAGCAAGAAGAGAGCGGCGTGAAGCTGCTGTGGGGAACGGCCAACTGCTTTACAAACCCTCGCTACGGCGCGGGTGCGGCGACGAACCCAGATCCTGAAGTCTTCAGCTGGGCGGCAACGCAAGTTGTTACAGCGATGGAAGCAACCCATAAATTGGGCGGTGAAAACTATGTCCTGTGGGGCGGTCGTGAAGGTTACGAAACGCTGTTAAATACCGACTTGCGTCAGGAGCGTGAACAACTGGGCCGCTTTATGCAGATGGTGGTTGAGCATAAACATAAAATCGGTTTCCAGGGCACGTTGCTTATCGAACCGAAACCGCAAGAACCGACCAAACATCAATATGATTACGATGCCGCGACGGTCTATGGCTTCCTGAAACAGTTTGGTCTGGAAAAAGAGATTAAACTGAACATTGAAGCTAACCACGCGACGCTGGCAGGTCACTCTTTCCATCATGAAATAGCCACCGCCATTGCGCTTGGCCTGTTCGGTTCTGTCGACGCCAACCGTGGCGATGCGCAACTGGGCTGGGACACCGACCAGTTCCCGAACAGTGTGGAAGAGAATGCGCTGGTGATGTATGAAATTCTCAAAGCAGGCGGTTTCACCACCGGTGGTCTGAACTTCGATGCCAAAGTACGTCGTCAAAGTACTGATAAATATGATCTGTTTTACGGTCATATCGGCGCGATGGATACGATGGCACTGGCGCTGAAAATTGCAGCGCGCATGATTGAAGATGGCGAGCTGGATAAACGCATCGCGCAGCGTTATTCCGGCTGGAATAGCGAATTGGGCCAGCAAATCCTGAAAGGCCAAATGTCACTGGCAGATTTAGCCAAATATGCTCAGGAACATCATTTGTCTCCGGTGCATCAGAGTGGTCGCCAGGAACAACTGGAAAATCTGGTAAACCATTATCTGTTCGACAAATAA", + "dna_sequence_length": 1323, + "functions": [ + "D-xylose isomerase" + ], + "id": "CDS_3505", + "location": [ + [ + "NC_000913", + 3730765, + "-", + 1323 + ] + ], + "md5": "8f792077f78fea52811e2cb619fcfd55", + "parent_gene": "", + "protein_md5": "547b8ae97de5f7bdf88ee5887850c66e", + "protein_translation": "MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRFAACYWHTFCWNGADMFGVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHDVDVSPEGASLKEYINNFAQMVDVLAGKQEESGVKLLWGTANCFTNPRYGAGAATNPDPEVFSWAATQVVTAMEATHKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTKHQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAGHSFHHEIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAARMIEDGELDKRIAQRYSGWNSELGQQILKGQMSLADLAKYAQEHHLSPVHQSGRQEQLENLVNHYLFDK", + "protein_translation_length": 440, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW3538" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37387" + ], + [ + "gene_synonym", + "EcoGene:EG20252" + ], + [ + "gene_synonym", + "b3566" + ], + [ + "gene_synonym", + "NP_418023.1" + ], + [ + "gene_synonym", + "xylT" + ], + [ + "gene_synonym", + "GI:16131437" + ], + [ + "gene_synonym", + "ASAP:ABE-0011646" + ], + [ + "gene_synonym", + "ECK3555" + ], + [ + "gene_synonym", + "GeneID:948090" + ], + [ + "gene_synonym", + "xylF" + ] + ], + "dna_sequence": "ATGAAAATAAAGAACATTCTACTCACCCTTTGCACCTCACTCCTGCTTACCAACGTTGCTGCACACGCCAAAGAAGTCAAAATAGGTATGGCGATTGATGATCTCCGTCTTGAACGCTGGCAAAAAGATCGAGATATCTTTGTGAAAAAGGCAGAATCTCTCGGCGCGAAAGTATTTGTACAGTCTGCAAATGGCAATGAAGAAACACAAATGTCGCAGATTGAAAACATGATAAACCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCGCGCCGGACAAATGAAAGTGTTAAAACCTTACGTTGATTCCGGAAAAATTAAAGTCGTTGGTGACCAATGGGTTGATGGCTGGTTACCGGAAAACGCATTGAAAATTATGGAAAACGCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAA", + "dna_sequence_length": 993, + "functions": [ + "D-xylose transporter subunit" + ], + "id": "CDS_3506", + "location": [ + [ + "NC_000913", + 3731131, + "+", + 993 + ] + ], + "md5": "18ba9bfeeee1c6131ebffb1277e7103d", + "parent_gene": "", + "protein_md5": "9e37d82f87e534925975eadfe2674218", + "protein_translation": "MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW3539" + ], + [ + "gene_synonym", + "GeneID:948127" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37388" + ], + [ + "gene_synonym", + "b3567" + ], + [ + "gene_synonym", + "xylG" + ], + [ + "gene_synonym", + "ASAP:ABE-0011648" + ], + [ + "gene_synonym", + "ECK3556" + ], + [ + "gene_synonym", + "GI:16131438" + ], + [ + "gene_synonym", + "EcoGene:EG12275" + ], + [ + "gene_synonym", + "NP_418024.1" + ] + ], + "dna_sequence": "ATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACGCTGTCAGAAGCTGCTCGCACAGGTCAGTTTATCCATTTCACCTGATACCCGCGTTGGCGATTTAGGGCTTGGGCAACAACAACTGGTTGAAATTGCCAAGGCACTTAATAAACAGGTGCGCTTGTTAATTCTCGATGAACCGACAGCCTCATTAACTGAGCAGGAAACGTCGATTTTACTGGATATTATTCGCGATCTACAACAGCACGGTATCGCCTGTATTTATATTTCGCACAAACTCAACGAAGTCAAAGCGATTTCCGATACGATTTGCGTTATTCGCGACGGACAGCACATTGGTACGCGTGATGCTGCCGGAATGAGTGAAGACGATATTATCACCATGATGGTCGGGCGAGAGTTAACCGCGCTTTACCCTAATGAACCACATACCACCGGAGATGAAATATTACGTATTGAACATCTGACGGCATGGCATCCGGTTAATCGTCATATTAAACGAGTTAATGATGTCTCGTTTTCCCTGAAACGTGGCGAAATATTGGGTATTGCCGGACTCGTTGGTGCCGGACGTACCGAGACCATTCAGTGCCTGTTTGGTGTGTGGCCCGGACAATGGGAAGGAAAAATTTATATTGATGGCAAACAGGTAGATATTCGTAACTGTCAGCAAGCCATCGCCCAGGGGATTGCGATGGTCCCCGAAGACAGAAAGCGCGACGGCATCGTTCCGGTAATGGCGGTTGGTAAAAATATTACCCTCGCCGCACTCAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACCAACTCGTCCAGCAGGGTATTGCCGTTATTGTCATCTCTTCCGAATTACCTGAAGTGCTCGGCCTTAGCGATCGTGTACTGGTGATGCATGAAGGGAAACTAAAAGCCAACCTGATAAATCATAACCTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGA", + "dna_sequence_length": 1542, + "functions": [ + "D-xylose ABC transporter dual domain ATPase" + ], + "id": "CDS_3507", + "location": [ + [ + "NC_000913", + 3732201, + "+", + 1542 + ] + ], + "md5": "bd7d578ec7d3196fab88ab95cb0eec01", + "parent_gene": "", + "protein_md5": "6992519dd8bb5850146e8a3e96a2aba8", + "protein_translation": "MPYLLEMKNITKTFGSVKAIDNVCLRLNAGEIVSLCGENGSGKSTLMKVLCGIYPHGSYEGEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENIFLGNEITHNGIMDYDLMTLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETSILLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDGQHIGTRDAAGMSEDDIITMMVGRELTALYPNEPHTTGDEILRIEHLTAWHPVNRHIKRVNDVSFSLKRGEILGIAGLVGAGRTETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQAIAQGIAMVPEDRKRDGIVPVMAVGKNITLAALNKFTGGISQLDDAAEQKCILESIQQLKVKTSSPDLAIGRLSGGNQQKAILARCLLLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQGIAVIVISSELPEVLGLSDRVLVMHEGKLKANLINHNLTQEQVMEAALRSEHHVEKQSV", + "protein_translation_length": 513, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16131439" + ], + [ + "gene_synonym", + "b3568" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGI4" + ], + [ + "gene_synonym", + "JW3540" + ], + [ + "gene_synonym", + "xylH" + ], + [ + "gene_synonym", + "ASAP:ABE-0011650" + ], + [ + "gene_synonym", + "GeneID:948083" + ], + [ + "gene_synonym", + "ECK3557" + ], + [ + "gene_synonym", + "NP_418025.1" + ], + [ + "gene_synonym", + "EcoGene:EG12276" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P0ACI3" + ], + [ + "gene_synonym", + "JW3541" + ], + [ + "gene_synonym", + "ASAP:ABE-0011652" + ], + [ + "gene_synonym", + "GeneID:948086" + ], + [ + "gene_synonym", + "ECK3558" + ], + [ + "gene_synonym", + "GI:16131440" + ] + ], + "dna_sequence": 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"gene_synonym", + "selB" + ], + [ + "gene_synonym", + "ECK3579" + ], + [ + "gene_synonym", + "ASAP:ABE-0011729" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14081" + ], + [ + "gene_synonym", + "fdhA" + ], + [ + "gene_synonym", + "EcoGene:EG10942" + ] + ], + "dna_sequence": 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"type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b3591" + ], + [ + "gene_synonym", + "JW3564" + ], + [ + "gene_synonym", + "ECK3580" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A821" + ], + [ + "gene_synonym", + "GI:16131462" + ], + [ + "gene_synonym", + "selA" + ], + [ + "gene_synonym", + "GeneID:948124" + ], + [ + "gene_synonym", + "NP_418048.1" + ], + [ + "gene_synonym", + "fdhA" + ], + [ + "gene_synonym", + "EcoGene:EG10941" + ], + [ + "gene_synonym", + "ASAP:ABE-0011731" + ] + ], + "dna_sequence": 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S-transferase homolog" + ], + "id": "CDS_3534", + "location": [ + [ + "NC_000913", + 3761955, + "-", + 609 + ] + ], + "md5": "92ac3e61822c340a23fec01503510701", + "parent_gene": "", + "protein_md5": "bdf43d94844e8e1113c69c49f67c0e25", + "protein_translation": "MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMDAGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFSRESFARTEPPKA", + "protein_translation_length": 202, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW3566" + ], + [ + "gene_synonym", + "ECK3582" + ], + [ + "gene_synonym", + "GI:16131464" + ], + [ + "gene_synonym", + "NP_418050.1" + ], + [ + "gene_synonym", + "b3593" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16916" + ], + [ + "gene_synonym", + "GeneID:948120" + ], + [ + "gene_synonym", + "ASAP:ABE-0011742" + ], + [ + "gene_synonym", + "EcoGene:EG10846" + ], + [ + "gene_synonym", + "rhsA" + ] + ], + "dna_sequence": 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protein" + ], + "id": "CDS_3536", + "location": [ + [ + "NC_000913", + 3766337, + "+", + 843 + ] + ], + "md5": "c6e61b277393c7908e3c9b126e0d208e", + "parent_gene": "", + "protein_md5": "d18afbf78dee68b5e81f6540cfe98193", + "protein_translation": "MSNTYQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTMLYKFDDNEIITSAIDKLKRS", + "protein_translation_length": 280, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yibJ" + ], + [ + "gene_synonym", + "GeneID:948112" + ], + [ + "gene_synonym", + "b3595" + ], + [ + "gene_synonym", + "EcoGene:EG11766" + ], + [ + "gene_synonym", + "ECK3584" + ], + [ + "gene_synonym", + "JW5647" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32109" + ], + [ + "gene_synonym", + "rhsJ" + ], + [ + "gene_synonym", + "ASAP:ABE-0011746" + ] + ], + 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"id": "CDS_3537", + "location": [ + [ + "NC_000913", + 3767221, + "+", + 945 + ] + ], + "md5": "205b98c071c2317744aba7fbebe7887a", + "parent_gene": "", + "protein_md5": "e8b865487f9e172870c79a95e7b4dce5", + "protein_translation": "VQMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLLGRYITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPESDLIHSVADEINIPGVFTIGGHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTGKGQNSFAS", + "protein_translation_length": 233, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b3596" + ], + [ + "gene_synonym", + "JW3570" + ], + [ + "gene_synonym", + "GeneID:948111" + ], + [ + "gene_synonym", + "EcoGene:EG11763" + ], + [ + "gene_synonym", + "ECK3585" + ], + [ + "gene_synonym", + "GI:16131467" + ], + [ + "gene_synonym", + "yibG" + ], + [ + "gene_synonym", + "NP_418053.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0011750" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32106" + ] + ], + "dna_sequence": "ATGAAAGCATGCTTGTTACTATTTTTTTATTTCTCTTTTATTTGTCAATTGCATGGTGCTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATCATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATGGGGTCTTTTTATCAGATACAAATCCAACATTATCAGAATATTATAATTTGAATAGAGCTATTTATTGGATGGAATTCGCTGTAAATAACGGTAATATTGATGCAAAGAGCAAACTTCAAGAGCTCAAAAAGCTAAAGCGAATGGATAGAAGGAAGAATAAGGAGAATCCGTAA", + "dna_sequence_length": 462, + "functions": [ + "TPR-like repeat protein" + ], + "id": "CDS_3538", + "location": [ + [ + "NC_000913", + 3768177, + "+", + 462 + ] + ], + "md5": "35dc9d1812b29c35ee8584dc436b5778", + "parent_gene": "", + "protein_md5": "30109b9477ccfa4741d9b7bd0fac24bd", + "protein_translation": "MKACLLLFFYFSFICQLHGADVKIKQNESMMGSTAMTYDLSEEKLMKLKYKSQHGDSEASFRLYQYYCFTKNNIYKQLRFLERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWMEFAVNNGNIDAKSKLQELKKLKRMDRRKNKENP", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:5625576" + ], + [ + "gene_synonym", + "b4650" + ], + [ + "gene_synonym", + "yibS" + ], + [ + "gene_synonym", + "ECK4440" + ], + [ + "gene_synonym", + "EcoGene:EG14348" + ] + ], + "dna_sequence": "AAGCAATAGTTCATCAGACTGCCGCAGCAGTAGTATGATGATGAATCAGGGCTGTACTATAACTATTATCGGTAACATTAACCGCAGCAGGGGCGGTATAACACTCAGGCTCCGATTGGGCTGGAAGGTAGGTGGAATTTTTATCAGTATCCGTTGAACCCGATTTCTGGAATCGATCCCCTTGGGATTAGCCACCTGTTTATACAGCATAACTTTAGGTATGCTTTCGTGTGTTTCAGATATACCATGTGA", + "dna_sequence_length": 252, + "id": "CDS_3539", + "location": [ + [ + "NC_000913", + 3768639, + "+", + 252 + ] + ], + "md5": "2cb15ea58b376dd04db37c3648c06771", + "parent_gene": "", + "protein_md5": "e7d06e530ab8792d58c0ebef4e0b36a4", + "protein_translation": "KQ", + "protein_translation_length": 2, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:5625577" + ], + [ + "gene_synonym", + "b4651" + ], + [ + "gene_synonym", + "EcoGene:EG14439" + ], + [ + "gene_synonym", + "ECK4450" + ], + [ + "gene_synonym", + "yibW" + ] + ], + "dna_sequence": "GATAATTTTTATGATGTGCTTAGTATTCCAGTCGCTTCTGGTAATAATATGCAATGTAAAAATAATCCCCGTTGTACACATTTAATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTAAATGAGTTAATATTTTCAGAGCCAGATAGCACATTAACAGTTACGGACTAA", + "dna_sequence_length": 366, + "id": "CDS_3540", + "location": [ + [ + "NC_000913", + 3768892, + "+", + 84 + ], + [ + "NC_000913", + 3768975, + "+", + 282 + ] + ], + "md5": "b30524cea59e1f9a3a393571ea71c6de", + "parent_gene": "", + "protein_md5": "5194423c7420509391cd7c8759e7eca2", + "protein_translation": "DNFYDVLSIPVASGNNMQCKNNPRCTHLINRWPIPQGLWSWNVNDPGASNRKPDGIRLVPSVNTGTYNRNGFSIHSCLNAFGPSLGPRFCSEGCITGLSNDMQKLNELIFSEPDSTLTVTD", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b4615" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A625" + ], + [ + "gene_synonym", + "GeneID:5061524" + ], + [ + "gene_synonym", + "EcoGene:EG14438" + ], + [ + "gene_synonym", + "yibV" + ], + [ + "gene_synonym", + "ECK4424" + ] + ], + "dna_sequence": "TTGGCAGACAAAGCAATATTATGGGCACTAATATCAGCCAGTACTAAAGAGGGACGAAAAGCGTGTTCACTAAGCTATTTTGCCTGTAAGGCCGCAGAGGCTGAACTCGGACTGGCATATATGGCTGCGAATGATAACAAGGAATTTCTCACATCCTTATCTAATATAATGAGGTACAAAATAGATGCTGGACTTTCCGAATCCTATACATGCTATTTATTAAGTAAGGGAAAGATCATAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATAAAATTGAGAGTTAATAGTACTATTATGGCCATTGATGATTCTATAAAGTGCATCGATGAATGA", + "dna_sequence_length": 438, + "id": "CDS_3541", + "location": [ + [ + "NC_000913", + 3769345, + "+", + 327 + ], + [ + "NC_000913", + 3769673, + "+", + 111 + ] + ], + "md5": "44f44016c461bb4f3f2cd412151ac46f", + "parent_gene": "", + "protein_md5": "00a5e0d1afca1498744384a0e97aa721", + "protein_translation": "LADKAILWALISASTKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYKIDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNKIKDKNKKIIDINSVNICSDDKNIKLRVNSTIMAIDDSIKCIDE", + "protein_translation_length": 145, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b4652" + ], + [ + "gene_synonym", + "EcoGene:EG14437" + ], + [ + "gene_synonym", + "yibU" + ], + [ + "gene_synonym", + "GeneID:5625578" + ], + [ + "gene_synonym", + "ECK4449" + ] + ], + "dna_sequence": "GACTGTCATCCTTCAGATAATAAAGCCATCATCGCAATAGATGGAAAAGCACTCCTGCTCTTTTTTGATTAGAGCCGTCGCAGGAGGGGAACAACTCATATCATCATTGCGATCTCGACGATGTATAGTCTCATCCTGCGGCAGAACAAGACGGATAAAAAATCCAATGAGAGCACACTCATCCAGAACTTATTAACATAA", + "dna_sequence_length": 201, + "id": "CDS_3542", + "location": [ + [ + "NC_000913", + 3769948, + "+", + 87 + ], + [ + "NC_000913", + 3770033, + "+", + 114 + ] + ], + "md5": "2c04b9b800fc9b27a60626ad8838f6de", + "parent_gene": "", + "protein_md5": "9b0bbee01fd2cc2f2cb6c3447a493e14", + "protein_translation": "DCHPSDNKAIIAIDGKALLLFFD", + 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"UniProtKB/Swiss-Prot:P67910" + ], + [ + "gene_synonym", + "ASAP:ABE-0011843" + ], + [ + "gene_synonym", + "GeneID:948134" + ], + [ + "gene_synonym", + "EcoGene:EG10838" + ] + ], + "dna_sequence": 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"ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding" + ], + "id": "CDS_3566", + "location": [ + [ + "NC_000913", + 3793987, + "+", + 933 + ] + ], + "md5": "ffb4a7a8516abb3ecdece2ba9ff71873", + "parent_gene": "", + "protein_md5": "d42624d49e07b165ca8ce2c4357ecf2d", + "protein_translation": "MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16131491" + ], + [ + "gene_synonym", + "EcoGene:EG12210" + ], + [ + "gene_synonym", + "waaF" + ], + [ + "gene_synonym", + "ECK3610" + ], + [ + "gene_synonym", + "JW3595" + ], + [ + "gene_synonym", + "b3620" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37692" + ], + [ + "gene_synonym", + "rfaF" + ], + [ + "gene_synonym", + "ASAP:ABE-0011845" + ], + [ + "gene_synonym", + "NP_418077.1" + ], + [ + "gene_synonym", + "GeneID:948135" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P24173" + ], + [ + "gene_synonym", + "b3621" + ], + [ + "gene_synonym", + "ASAP:ABE-0011847" + ], + [ + "gene_synonym", + "rfaC" + ], + [ + "gene_synonym", + "GeneID:948136" + ], + [ + "gene_synonym", + "EcoGene:EG11189" + ], + [ + "gene_synonym", + "NP_418078.1" + ] + ], + "dna_sequence": 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"functions": [ + "ADP-heptose:LPS heptosyl transferase I" + ], + "id": "CDS_3568", + "location": [ + [ + "NC_000913", + 3795979, + "+", + 960 + ] + ], + "md5": "daecfe184a664452c6424420c92f198a", + "parent_gene": "", + "protein_md5": "2bf83ea01d6f83c16c0aaced1463fed0", + "protein_translation": "MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPVAIRRWRKAWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAALVTRLAHGVKHGMDWQTAREPLASLFYNRKHHIAKQQHAVERTRELFAKSLGYSKPQTQGDYAIAQHFLTNLPTDAGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPRENLINLNSQAVLEKLSSL", + "protein_translation_length": 319, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16131493" + ], + [ + "gene_synonym", + "ECK3612" + ], + [ + "gene_synonym", + "JW3597" + ], + [ + "gene_synonym", + "b3622" + ], + [ + "gene_synonym", + "waaL" + ], + [ + "gene_synonym", + "NP_418079.1" + ], + [ + "gene_synonym", + "GeneID:948148" + ], + [ + "gene_synonym", + "EcoGene:EG11424" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27243" + ], + [ + "gene_synonym", + "rfaL" + ], + [ + "gene_synonym", + "ASAP:ABE-0011849" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P27241" + ], + [ + "gene_synonym", + "NP_418081.1" + ], + [ + "gene_synonym", + "waaZ" + ], + [ + "gene_synonym", + "GeneID:948146" + ], + [ + "gene_synonym", + "ASAP:ABE-0011854" + ], + [ + "gene_synonym", + "GI:16131495" + ] + ], + "dna_sequence": 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"GeneID:948145" + ], + [ + "gene_synonym", + "ASAP:ABE-0011856" + ] + ], + "dna_sequence": "ATGATTCAGAAGAGCAAGATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATGACTTCTTGTCTTATAATATAAATATCATCAAGGTTTTTCGTTCTATTGATGATACAAAAGTTATGCTTATTGATACCGATTACGGTAAATTGATTCTTAAGGTTTTTTCTCCGAAAGTTAAGCGTAACGAACGTTTCTTTAAGTCTCTGTTAAAAGGTGATTATTACGAACGCCTTTTTGAGCAAACCCAAAAAGTACGAAATGAAGGGTTAAATACACTCAATGACTTTTATTTATTGGCTGAACGGAAAACCTTACGTTTTGTCCATACTTATATCATGATCATCGAGTATATTGATGGCATAGAGTTGTGTGATATGCCCGATATTGATGATGCGCTAAAAAATAAAATTCAGCAATCAATTAATGCCTTACATCAACATGGCATGGTTTCTGGCGACCCCCATCGTGGTAACTTCATTATAAAAAATGGTGAGGTTCGAATTATCGATCTCTCCGGAAAGCGTGCTTCAGCGCAGCGTAAAGCGAAAGATCGTATTGACTTAGAGCGTCATTACGGTATTAAAAATGAGATTAGAGATCTAGGCTATTATCTTTTAGTATATCGTAAAAAAATGCGCAATTTTATGCGGCGTTTGAAAGGGAAACCAGCGCGCTAA", + "dna_sequence_length": 699, + "functions": [ + "lipopolysaccharide core biosynthesis protein" + ], + "id": "CDS_3572", + "location": [ + [ + "NC_000913", + 3800965, + "-", + 699 + ] + ], + "md5": "25719ec2d92e5dae0a81a834cf1d78d3", + "parent_gene": "", + "protein_md5": "11985a3d246f43ca04a18adbe64c7d7a", + "protein_translation": "MIQKSKIKDLVVFTDENNSKYLNVLNDFLSYNINIIKVFRSIDDTKVMLIDTDYGKLILKVFSPKVKRNERFFKSLLKGDYYERLFEQTQKVRNEGLNTLNDFYLLAERKTLRFVHTYIMIIEYIDGIELCDMPDIDDALKNKIQQSINALHQHGMVSGDPHRGNFIIKNGEVRIIDLSGKRASAQRKAKDRIDLERHYGIKNEIRDLGYYLLVYRKKMRNFMRRLKGKPAR", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27129" + ], + [ + "gene_synonym", + "ASAP:ABE-0011858" + ], + [ + "gene_synonym", + "GI:16131497" + ], + [ + "gene_synonym", + "b3626" + ], + [ + "gene_synonym", + "waaJ" + ], + [ + "gene_synonym", + "NP_418083.1" + ], + [ + "gene_synonym", + "ECK3616" + ], + [ + "gene_synonym", + "waaR" + ], + [ + "gene_synonym", + "JW3601" + ], + [ + "gene_synonym", + "EcoGene:EG11353" + ], + [ + "gene_synonym", + "rfaN" + ], + [ + "gene_synonym", + "GeneID:948142" + ], + [ + "gene_synonym", + "rfaJ" + ] + ], + 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"gene_synonym", + "UniProtKB/Swiss-Prot:P27127" + ], + [ + "gene_synonym", + "lps" + ], + [ + "gene_synonym", + "GI:226524757" + ], + [ + "gene_synonym", + "ASAP:ABE-0011862" + ], + [ + "gene_synonym", + "rfaB" + ], + [ + "gene_synonym", + "NP_418085.2" + ], + [ + "gene_synonym", + "JW3603" + ], + [ + "gene_synonym", + "GeneID:948144" + ], + [ + "gene_synonym", + "phx*" + ] + ], + "dna_sequence": "ATGAAAATAGCGTTTATCGGCGAAGCTGTTTCTGGATTTGGCGGCATGGAAACTGTCATCCGTGATGTTATTACTACCTTCAGGCAACAACATATCCAAAGTGAAATGTTTTTCTTTTGTCGTAATGACAAAATGGATAAGGGATGGCTGGAAGGTATTAAATACTCATGTTCATTTTCCAATATTCGTTTAGGTTTTTTGCGTCGGGCGAAACATATTCATGCTCTAAGTAAATGGCTTCAGGAGTACCAACCAGATATCGTTATTTGTATTGATGTGATCTCCTGCCTGTTTGCCGCAAAAGCACGTAAAAAATCAGGAATTGATATGCCAGTATTTTCATGGCCACATTTTTCTTTAGATCACAAAAAACATGCTGAATATATCACCTGTGCCGACTATCATTTAGCAATCAGCTCTGGCATTAAACAGCAAATGATTAATCGAGGTGTAGCAGAATCGACGATAAATGTTATTTTTAATCCCGTCGAAACTAAAGACTCAGTCATTCCCGCGCCCGAGGAAGGTGAAACGGCAACGTTTATTTATGTTGGGCGTATGAAATTTGAAGGCCAGAAAAGAGTTAAAGACCTGCTTGATGGCTTATCACAAGCGAAAGGTAACTGGAAACTCCATGTATTGGGTGATGGCTCCGATTTCGAAAAATGCCAGGCTTATGGTAGAGAATTAAATATTGATGATCGAATTGTCTGGTATGGTTGGCAACAATATCCCTGGGAATTGGTCCAGCAAGATATTGAAAAAGTGAGTGCGTTATTGCTCACGTCATCTTTTGAAGGTTTCCCAATGACCCTACTTGAAGCCTTGTCGTGGGGGATTCCTTGTATCAGTGCCGATTGTGTCTCCGGGCCTGCTGACATTATTCAACCTGATGTCAATGGCCATCTGTATCAACCGGGAGATATTGCTGGTTTTGTAACTCTTCTAAATAAATATATAGCAGGTGAAATTCATATCGAACATGAAAAAATTCCTGCGTCGATCGATGAATTTTACCAATCGAAGTATTACGATAGATTACATAAGGTAATTATTTCTGCTATTTCCCGGAGGAAATAA", 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"b3629" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27126" + ], + [ + "gene_synonym", + "waaS" + ], + [ + "gene_synonym", + "EcoGene:EG11350" + ], + [ + "gene_synonym", + "GI:16131500" + ], + [ + "gene_synonym", + "ASAP:ABE-0011864" + ], + [ + "gene_synonym", + "GeneID:948151" + ], + [ + "gene_synonym", + "JW3604" + ] + ], + "dna_sequence": "ATGACTATTTATTTTATAAATTGGGTTGCAGATTATGAATTAAAAATGATTCAGTACCTGAAAAAAAAGTACAAGATAAAAAATATAACAACACCAAAAAAATATAACTGGATTAATAAAAAAATATCAAAAATAGGGATGGATAATGCATGGCTGGGGCGATTATTCATCAAGCATTACCTCAATGATATTAAAAAAGATGACATAATTATCATTAATGACAGTGTTGTTAATAAAGGTATCAATAAACAAATATTAAAAAATATTAACTGTCATAAAGTTTTGCTTCTAAGAAATACTGTTGGCGAAGATTTTATTCTTGATAACGCGAATTATTTCGATATTATATATGATTTTGAGCATAGATTTATAGGGAATGAAAAGATCAAGGCAATAGAACAATTTTTTCCTATAGGAATGGATGAAATTAGAAATTATAGTTTATCTGACAAAAATAACAGCCAGCCAATATGTTTTTTCCTTGGTCGTGATAAAGGGCGTCTTCAAATAATTAATGAGTTAGCCGAGAGATTAACAACACTAGGATGTAAGCTAGATTTTAATGTTGTCAAAGATAAGACATCATCTACGACTTCAAAGTATTTGATTGAAAAACAAATATCTTATGAAGAGAATATTAGAAGAACATTAAATGCTAATATAATTGTTGATATAACCAAAGAAAACCAATCTGGCTGGACTCTTCGTATACTTGAGGCACTATTTTTCAATAAAAAATTAATTACTAATAATATAAATGTATTTGGTTCAGAAATCTATAGTGAATCTCGCTTTTTTATAATAGGTCATGATGATTGGGATAAGTTAGAGTATTTTATTAACTCATCTGTTAAACCAATGGATTATGATAGTTTATATAAATTCAGTCCAGATAAAATGATGTCAACGATTGTTTCTGATTTTATAGACAAATAA", + "dna_sequence_length": 936, + "functions": [ + "lipopolysaccharide rhamnose:KdoIII transferase", + "lipopolysaccharide core biosynthesis protein" + ], + "id": "CDS_3576", + "location": [ + [ + "NC_000913", + 3805116, + "-", + 936 + ] + ], + "md5": "8d5a292697a0db3ddcb7e1815ed1148e", + "parent_gene": "", + "protein_md5": "144003c1c98ec31b8db4e4303efb5bb5", + "protein_translation": "MTIYFINWVADYELKMIQYLKKKYKIKNITTPKKYNWINKKISKIGMDNAWLGRLFIKHYLNDIKKDDIIIINDSVVNKGINKQILKNINCHKVLLLRNTVGEDFILDNANYFDIIYDFEHRFIGNEKIKAIEQFFPIGMDEIRNYSLSDKNNSQPICFFLGRDKGRLQIINELAERLTTLGCKLDFNVVKDKTSSTTSKYLIEKQISYEENIRRTLNANIIVDITKENQSGWTLRILEALFFNKKLITNNINVFGSEIYSESRFFIIGHDDWDKLEYFINSSVKPMDYDSLYKFSPDKMMSTIVSDFIDK", + "protein_translation_length": 311, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:948150" + ], + [ + "gene_synonym", + "GI:16131501" + ], + [ + "gene_synonym", + "rfaP" + ], + [ + "gene_synonym", + "b3630" + ], + [ + "gene_synonym", + "NP_418087.1" + ], + [ + "gene_synonym", + "waaP" + ], + [ + "gene_synonym", + "ECK3620" + ], + [ + "gene_synonym", + "ASAP:ABE-0011866" + ], + [ + "gene_synonym", + "EcoGene:EG11340" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25741" + ], + [ + "gene_synonym", + "JW3605" + ] + ], + "dna_sequence": "ATGGTTGAATTAAAAGAGCCGCTTGCCACACTTTGGCGTGGTAAAGATGCTTTTGCAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGCTTTGAACTGTCCGGGAAAAGCTATTTTCTTAAATGGCACAAGGGGACGACATTAAAAGAGATTATAAAAAATCTACTCTCATTGCGGATGCCCGTTTTGGGCGCAGACAGAGAGTGGCACGCTATTCATCGCCTGAGTGATGTTGGCGTTGATACAATGAAGGGCATTGGGTTTGGCGAAAAAGGGTTAAATCCATTAACTCGCGCATCATTTATTATTACCGAAGATCTCACTCCCACAATTAGCCTTGAAGATTATTGTGCCGATTGGGCAGTCAACCCGCCTGATATACGTGTTAAGCGTATGCTGATCGCACGTGTAGCAACTATGGTGCGTAAAATGCATACTGCAGGGATAAATCACCGCGACTGTTACATTTGCCACTTTTTGCTTCATTTGCCATTTACTGGCCGGGAAGATGAATTAAAAATTTCAGTTATCGATCTGCATCGGGCACAGATACGTGCAAAAGTACCGCGCCGCTGGCGCGATAAAGACCTGATTGGTTTATATTTCTCATCAATGAATATTGGCCTGACGCAAAGAGATATCTGGCGATTTATGAAGGTTTATTTTGGGATGCCTTTACGCAAAATATTGTCTCTTGAACAGAATTTATTGAACATGGCAAGCGTTAAGGCCGAGCGTATTAAAGAGCGAACACAACGCAAAGGATTATAA", + "dna_sequence_length": 798, + "functions": [ + "kinase that phosphorylates core heptose of lipopolysaccharide" + ], + "id": "CDS_3577", + "location": [ + [ + "NC_000913", + 3805950, + "-", + 798 + ] + ], + "md5": "b8f989554d953e48c90391fc5bf2a15a", + "parent_gene": "", + "protein_md5": "d81661e1b38bb1dd15d6ed2325b21225", + "protein_translation": "MVELKEPLATLWRGKDAFAEVKKLNGEVFRELETRRTLRFELSGKSYFLKWHKGTTLKEIIKNLLSLRMPVLGADREWHAIHRLSDVGVDTMKGIGFGEKGLNPLTRASFIITEDLTPTISLEDYCADWAVNPPDIRVKRMLIARVATMVRKMHTAGINHRDCYICHFLLHLPFTGREDELKISVIDLHRAQIRAKVPRRWRDKDLIGLYFSSMNIGLTQRDIWRFMKVYFGMPLRKILSLEQNLLNMASVKAERIKERTQRKGL", + "protein_translation_length": 265, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16131502" + ], + [ + "gene_synonym", + "GeneID:948149" + ], + [ + "gene_synonym", + "waaG" + ], + [ + "gene_synonym", + "b3631" + ], + [ + "gene_synonym", + "rfaG" + ], + [ + "gene_synonym", + "ECK3621" + ], + [ + "gene_synonym", + "ASAP:ABE-0011868" + ], + [ + "gene_synonym", + "NP_418088.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25740" + ], + [ + "gene_synonym", + "EcoGene:EG11339" + ], + [ + "gene_synonym", + "JW3606" + ] + ], + "dna_sequence": "ATGATCGTGGCGTTTTGTTTATATAAATATTTTCCATTTGGTGGGCTTCAACGTGACTTTATGCGCATTGCATCAACAGTTGCCGCACGGGGCCACCATGTTCGGGTATATACACAGTCGTGGGAAGGCGATTGCCCGAAAGCATTTGAGCTTATTCAGGTGCCAGTTAAGTCCCATACCAACCATGGACGCAATGCAGAATATTATGCCTGGGTACAAAATCATCTCAAAGAGCATCCCGCAGATCGCGTTGTTGGGTTTAATAAGATGCCTGGCCTGGATGTTTATTTTGCCGCTGATGTTTGTTACGCCGAGAAAGTTGCGCAAGAAAAAGGTTTTTTATATCGTTTAACATCACGATATCGCCATTATGCCGCATTTGAGCGAGCGACTTTCGAGCAGGGTAAATCGACGAAACTTATGATGCTGACCGATAAGCAAATCGCCGATTTCCAGAAGCATTATCAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACAGTGAGCAAATCCCAAACAGCCGTGAAATTTATCGCCAGAAAAATGGCATAAAAGAGCAACAAAACTTATTACTGCAGGTTGGATCAGATTTTGGCCGTAAAGGTGTAGATCGCTCAATTGAAGCTTTGGCATCGTTACCGGAATCATTACGTCACAATACGCTTTTATTTGTTGTTGGTCAGGATAAGCCGCGAAAATTTGAAGCGCTGGCAGAAAAACTCGGCGTGCGGAGCAATGTGCATTTCTTCTCCGGTCGCAATGATGTGTCAGAATTAATGGCAGCCGCTGATTTATTACTGCATCCCGCTTATCAGGAAGCCGCGGGTATCGTTCTTCTAGAAGCGATCACTGCTGGGTTACCTGTTTTAACAACAGCGGTATGTGGGTACGCGCATTATATTGCGGATGCCAATTGTGGAACGGTCATCGCTGAACCTTTCTCTCAGGAACAATTAAATGAAGTTTTACGTAAAGCGTTAACTCAGTCGCCATTGCGAATGGCCTGGGCGGAGAATGCTCGCCATTATGCCGATACTCAGGATTTGTATAGCTTGCCAGAAAAAGCCGCGGATATCATTACAGGTGGTTTAGATGGTTGA", 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"gene_synonym", + "NP_418107.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG24" + ], + [ + "gene_synonym", + "GI:16131521" + ], + [ + "gene_synonym", + "JW3625" + ], + [ + "gene_synonym", + "b3650" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "GeneID:948166" + ], + [ + "gene_synonym", + "NP_418110.1" + ], + [ + "gene_synonym", + "JW3628" + ], + [ + "gene_synonym", + "gltC" + ], + [ + "gene_synonym", + "b3653" + ], + [ + "gene_synonym", + "EcoGene:EG10406" + ] + ], + "dna_sequence": 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"yicE" + ], + [ + "gene_synonym", + "ASAP:ABE-0011946" + ], + [ + "gene_synonym", + "GeneID:948172" + ], + [ + "gene_synonym", + "JW3629" + ], + [ + "gene_synonym", + "b3654" + ], + [ + "gene_synonym", + "GI:16131525" + ], + [ + "gene_synonym", + "NP_418111.1" + ] + ], + "dna_sequence": 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"aliases": [ + [ + "gene_synonym", + "ECK3646" + ], + [ + "gene_synonym", + "yicI" + ], + [ + "gene_synonym", + "NP_418113.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31434" + ], + [ + "gene_synonym", + "ASAP:ABE-0011951" + ], + [ + "gene_synonym", + "EcoGene:EG11685" + ], + [ + "gene_synonym", + "b3656" + ], + [ + "gene_synonym", + "JW3631" + ], + [ + "gene_synonym", + "GeneID:948169" + ], + [ + "gene_synonym", + "GI:16131527" + ] + ], + "dna_sequence": 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"erhM" + ], + [ + "gene_synonym", + "ECK4456" + ], + [ + "gene_synonym", + "EcoGene:EG14448" + ], + [ + "gene_synonym", + "yicT" + ] + ], + "dna_sequence": "ATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTA", + "dna_sequence_length": 132, + "id": "CDS_3605", + "location": [ + [ + "NC_000913", + 3836425, + "+", + 132 + ] + ], + "md5": "dff1a5e4ef3be24553ac10cd306bc31e", + "parent_gene": "", + "protein_md5": "d65df6b24ac2c6b544dd539b5fdb483a", + "protein_translation": "MDDERLKNPPVGSSVLERIRDIHASMRRVYLQVICPPADSQPTV", + "protein_translation_length": 44, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yicK" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31436" + ], + [ + "gene_synonym", + "setC" + ], + [ + "gene_synonym", + "ECK3649" + ], + [ + "gene_synonym", + "GI:16131529" + ], + [ + "gene_synonym", + "b3659" + ], + [ + "gene_synonym", + "GeneID:948177" + ], + [ + "gene_synonym", + "EcoGene:EG11687" + ], + [ + "gene_synonym", + "NP_418115.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0011959" + ], + [ + "gene_synonym", + "JW3633" + ] + ], + "dna_sequence": 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"ATGTCGAATTCTTATGACTCCTCCAGTATCAAAGTCCTGAAAGGGCTGGATGCGGTGCGTAAGCGCCCGGGTATGTATATCGGCGACACGGATGACGGCACCGGTCTGCACCACATGGTATTCGAGGTGGTAGATAACGCTATCGACGAAGCGCTCGCGGGTCACTGTAAAGAAATTATCGTCACCATTCACGCCGATAACTCTGTCTCTGTACAGGATGACGGGCGCGGCATTCCGACCGGTATTCACCCGGAAGAGGGCGTATCGGCGGCGGAAGTGATCATGACCGTTCTGCACGCAGGCGGTAAATTTGACGATAACTCCTATAAAGTGTCCGGCGGTCTGCACGGCGTTGGTGTTTCGGTAGTAAACGCCCTGTCGCAAAAACTGGAGCTGGTTATCCAGCGCGAGGGTAAAATTCACCGTCAGATCTACGAACACGGTGTACCGCAGGCCCCGCTGGCGGTTACCGGCGAGACTGAAAAAACCGGCACCATGGTGCGTTTCTGGCCCAGCCTCGAAACCTTCACCAATGTGACCGAGTTCGAATATGAAATTCTGGCGAAACGTCTGCGTGAGTTGTCGTTCCTCAACTCCGGCGTTTCCATTCGTCTGCGCGACAAGCGCGACGGCAAAGAAGACCACTTCCACTATGAAGGCGGCATCAAGGCGTTCGTTGAATATCTGAACAAGAACAAAACGCCGATCCACCCGAATATCTTCTACTTCTCCACTGAAAAAGACGGTATTGGCGTCGAAGTGGCGTTGCAGTGGAACGATGGCTTCCAGGAAAACATCTACTGCTTTACCAACAACATTCCGCAGCGTGACGGCGGTACTCACCTGGCAGGCTTCCGTGCGGCGATGACCCGTACCCTGAACGCCTACATGGACAAAGAAGGCTACAGCAAAAAAGCCAAAGTCAGCGCCACCGGTGACGATGCGCGTGAAGGCCTGATTGCGGTCGTTTCCGTGAAAGTGCCGGACCCGAAATTCTCCTCCCAGACCAAAGACAAACTGGTTTCTTCTGAGGTGAAATCGGCGGTTGAACAGCAGATGAACGAACTGCTGGCAGAATACCTGCTGGAAAACCCAACCGACGCGAAAATCGTGGTTGGCAAAATTATCGATGCTGCCCGTGCCCGTGAAGCGGCGCGTCGCGCGCGTGAAATGACCCGCCGTAAAGGTGCGCTCGACTTAGCGGGCCTGCCGGGCAAACTGGCAGACTGCCAGGAACGCGATCCGGCGCTTTCCGAACTGTACCTGGTGGAAGGGGACTCCGCGGGCGGCTCTGCGAAGCAGGGGCGTAACCGCAAGAACCAGGCGATTCTGCCGCTGAAGGGTAAAATCCTCAACGTCGAGAAAGCGCGCTTCGATAAGATGCTCTCTTCTCAGGAAGTGGCGACGCTTATCACCGCGCTTGGCTGTGGTATCGGTCGTGACGAGTACAACCCGGACAAACTGCGTTATCACAGCATCATCATCATGACCGATGCGGACGTCGACGGCTCGCACATTCGTACGCTGCTGTTGACCTTCTTCTATCGTCAGATGCCGGAAATCGTTGAACGCGGTCACGTCTACATCGCTCAGCCGCCGCTGTACAAAGTGAAGAAAGGCAAGCAGGAACAGTACATTAAAGACGACGAAGCGATGGATCAGTACCAGATCTCTATCGCGCTGGACGGCGCAACGCTGCACACCAACGCCAGTGCACCGGCATTGGCTGGCGAAGCGTTAGAGAAACTGGTATCTGAGTACAACGCGACGCAGAAAATGATCAATCGTATGGAGCGTCGTTATCCGAAAGCAATGCTGAAAGAGCTTATCTATCAGCCGACGTTGACGGAAGCTGACCTTTCTGATGAGCAGACCGTTACCCGCTGGGTGAACGCGCTGGTCAGCGAACTGAACGACAAAGAACAGCACGGCAGCCAGTGGAAGTTTGATGTTCACACCAATGCTGAGCAAAACCTGTTCGAGCCGATTGTTCGCGTGCGTACCCACGGTGTGGATACTGACTATCCGCTGGATCACGAGTTTATCACCGGTGGCGAATATCGTCGTATCTGCACGCTGGGTGAGAAACTGCGTGGCTTGCTGGAAGAAGATGCGTTTATCGAACGTGGCGAGCGTCGTCAGCCGGTAGCCAGCTTCGAGCAGGCGCTGGACTGGCTGGTGAAAGAGTCCCGTCGCGGCCTCTCCATCCAGCGTTATAAAGGTCTGGGCGAGATGAACCCGGAACAGCTGTGGGAAACCACTATGGACCCGGAAAGTCGTCGTATGCTGCGCGTTACCGTTAAAGATGCGATTGCTGCCGACCAGTTGTTCACCACGCTGATGGGCGACGCCGTTGAACCGCGCCGTGCGTTTATTGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAA", 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"MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMERRYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLFEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFEQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALKAANIDI", + "protein_translation_length": 804, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012095" + ], + [ + "gene_synonym", + "ECK3692" + ], + [ + "gene_synonym", + "JW3677" + ], + [ + "gene_synonym", + "GeneID:948209" + ], + [ + "gene_synonym", + "recF" + ], + [ + "gene_synonym", + "b3700" + ], + [ + "gene_synonym", + "NP_418155.1" + ], + [ + "gene_synonym", + "EcoGene:EG10828" + ], + [ + "gene_synonym", + "uvrF" + ], + [ + "gene_synonym", + "GI:16131568" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7H0" + ] + ], + "dna_sequence": 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+ "gene_synonym", + "EcoGene:EG10242" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A988" + ], + [ + "gene_synonym", + "GI:16131569" + ], + [ + "gene_synonym", + "dnaN" + ] + ], + "dna_sequence": 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superfamily protein" + ], + "id": "CDS_3661", + "location": [ + [ + "NC_000913", + 3893881, + "+", + 750 + ] + ], + "md5": "f40b66b7934626e94972cab13a5d195a", + "parent_gene": "", + "protein_md5": "771aad9222bb4ada72854819b4f785b9", + "protein_translation": "MATHFARGILTEGHLISVRLPSQCHQEARNIPPHRQSRFLASRGLLAELMFMLYGIGELPEIVTLPKGKPVFSDKNLPSFSISYAGNMVGVALTTEGECGLDMELQRATRGFHSPHAPDNHTFSSNESLWISKQNDPNEARAQLITLRRSVLKLTGDVLNDDPRDLQLLPIAGRLKCAHVNHVEALCDAEDVLVWSVAVTPTIEKLSVWELDGKHGWKSLPDIHSRANNPTSRMMRFAQLSTVKAFSPN", + "protein_translation_length": 249, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGE6" + ], + [ + "gene_synonym", + "GeneID:948225" + ], + [ + "gene_synonym", + "chrR" + ], + [ + "gene_synonym", + "NP_418169.1" + ], + [ + "gene_synonym", + "yieF" + ], + [ + "gene_synonym", + "b3713" + ], + [ + "gene_synonym", + "JW3691" + ], + [ + "gene_synonym", + "ECK3706" + ], + [ + "gene_synonym", + "EcoGene:EG11723" + ], + [ + "gene_synonym", + "ASAP:ABE-0012146" + ], + [ + "gene_synonym", + "GI:16131581" + ] + ], + "dna_sequence": "ATGTCTGAAAAATTGCAGGTGGTTACGTTACTGGGGAGCCTGCGCAAAGGCTCATTTAATGGCATGGTTGCACGTACCCTGCCGAAAATTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATGGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAA", + "dna_sequence_length": 567, + "functions": [ + "chromate reductase, Class I, flavoprotein" + ], + "id": "CDS_3662", + "location": [ + [ + "NC_000913", + 3894652, + "+", + 567 + ] + ], + "md5": "971e1134aa4110f621ddfac3023096d7", + "parent_gene": "", + "protein_md5": "ff9ecfec7cdf5b165f58df1393f56211", + "protein_translation": 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"protein_translation": "MSRIEAVFFDCDGTLVDSEVICSRAYVTMFQEFGITLDPEEVFKRFKGVKLYEIIDIVSLEHGVTLAKTEAEHVYRAEVARLFDSELEAIEGAGALLSAITAPMCVVSNGPNNKMQHSMGKLNMLHYFPDKLFSGYDIQRWKPDPALMFHAAKAMNVNVENCILVDDSVAGAQSGIDAGMEVFYFCADPHNKPIVHPKVTTFTHLSQLPELWKARGWDITA", + "protein_translation_length": 221, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_418172.1" + ], + [ + "gene_synonym", + "yieI" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31468" + ], + [ + "gene_synonym", + "b3716" + ], + [ + "gene_synonym", + "GeneID:948231" + ], + [ + "gene_synonym", + "JW3694" + ], + [ + "gene_synonym", + "EcoGene:EG11726" + ], + [ + "gene_synonym", + "ASAP:ABE-0012156" + ], + [ + "gene_synonym", + "ECK3709" + ], + [ + "gene_synonym", + "GI:16131584" + ], + [ + "gene_synonym", + "cbrB" + ] + ], + "dna_sequence": 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"protein_translation_length": 155, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31469" + ], + [ + "gene_synonym", + "yieJ" + ], + [ + "gene_synonym", + "b3717" + ], + [ + "gene_synonym", + "JW3695" + ], + [ + "gene_synonym", + "GeneID:948230" + ], + [ + "gene_synonym", + "NP_418173.1" + ], + [ + "gene_synonym", + "EcoGene:EG11727" + ], + [ + "gene_synonym", + "ECK3710" + ], + [ + "gene_synonym", + "ASAP:ABE-0012158" + ], + [ + "gene_synonym", + "cbrC" + ], + [ + "gene_synonym", + "GI:16131585" + ] + ], + "dna_sequence": 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"cf25bdeb432fb5432f7962022fb5d0ab", + "protein_translation": "MKLIITEDYQEMSRVAAHHLLGYMSKTRRVNLAITAGSTPKGMYEYLTTLVKGKPWYDNCYFYNFDEIPFRGKEGEGVTITNLRNLFFTPAGIKEENIQKLTIDNYREHDQKLAREGGLDLVVLGLGADGHFCGNLPNTTHFHEQTVEFPIQGEMVDIVAHGELGGDFSLVPDSYVTMGPKSIMAAKNLLIIVSGAGKAQALKNVLQGPVTEDVPASVLQLHPSLMVIADKAAAAELALG", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yieL" + ], + [ + "gene_synonym", + "NP_418175.3" + ], + [ + "gene_synonym", + "b3719" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31471" + ], + [ + "gene_synonym", + "ASAP:ABE-0012163" + ], + [ + "gene_synonym", + "GI:145698330" + ], + [ + "gene_synonym", + "ECK3712" + ], + [ + "gene_synonym", + "JW5612" + ], + [ + "gene_synonym", + "GeneID:948272" + ], + [ + "gene_synonym", + "EcoGene:EG11729" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_418176.1" + ], + [ + "gene_synonym", + "GI:16131588" + ], + [ + "gene_synonym", + "yieC" + ], + [ + "gene_synonym", + "ECK3713" + ], + [ + "gene_synonym", + "EcoGene:EG11364" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26218" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "ASAP:ABE-0012169" + ], + [ + "gene_synonym", + "JW3699" + ], + [ + "gene_synonym", + "b3721" + ], + [ + "gene_synonym", + "bglB" + ], + [ + "gene_synonym", + "GeneID:948234" + ], + [ + "gene_synonym", + "ECK3714" + ], + [ + "gene_synonym", + "GI:16131589" + ], + [ + "gene_synonym", + "EcoGene:EG10114" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11988" + ] + ], + "dna_sequence": 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"GI:16131590" + ], + [ + "gene_synonym", + "b3722" + ], + [ + "gene_synonym", + "bglC" + ], + [ + "gene_synonym", + "GeneID:948236" + ], + [ + "gene_synonym", + "ASAP:ABE-0012171" + ], + [ + "gene_synonym", + "bglF" + ], + [ + "gene_synonym", + "ECK3715" + ], + [ + "gene_synonym", + "NP_418178.1" + ], + [ + "gene_synonym", + "bglS" + ], + [ + "gene_synonym", + "EcoGene:EG10115" + ] + ], + "dna_sequence": 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"EcoGene:EG10104" + ], + [ + "gene_synonym", + "GI:16131601" + ], + [ + "gene_synonym", + "NP_418189.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABA6" + ], + [ + "gene_synonym", + "papC" + ], + [ + "gene_synonym", + "uncG" + ], + [ + "gene_synonym", + "ECK3726" + ], + [ + "gene_synonym", + "b3733" + ], + [ + "gene_synonym", + "ASAP:ABE-0012211" + ], + [ + "gene_synonym", + "atpG" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_418196.1" + ], + [ + "gene_synonym", + "rsmG" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6U5" + ], + [ + "gene_synonym", + "ECK3733" + ], + [ + "gene_synonym", + "JW3718" + ], + [ + "gene_synonym", + "EcoGene:EG10376" + ], + [ + "gene_synonym", + "b3740" + ], + [ + "gene_synonym", + "gidB" + ], + [ + "gene_synonym", + "GeneID:948250" + ], + [ + "gene_synonym", + "ASAP:ABE-0012229" + ] + ], + "dna_sequence": 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"ATGGCAGATATCACTCTTATCAGCGGCAGCACCCTCGGCGGTGCCGAATATGTAGCAGAACACCTGGCTGAAAAGCTGGAAGAGGCGGGTTTTACCACCGAAACGCTGCACGGTCCGCTGTTAGAAGATTTACCTGCCTCAGGGATCTGGCTGGTTATCAGCTCCACCCACGGTGCCGGAGATATTCCGGACAACCTTTCTCCTTTCTATGAAGCATTGCAGGAACAGAAGCCCGATCTTTCTGCAGTCCGCTTTGGCGCAATCGGTATTGGCAGTCGTGAATATGACACCTTTTGTGGGGCTATCGATAAACTCGAGGCAGAACTCAAAAATTCCGGTGCAAAACAGACAGGCGAAACACTGAAGATCAACATTCTTGATCACGACATTCCGGAAGATCCGGCAGAAGAATGGCTGGGATCGTGGGTTAATTTACTCAAATAA", + "dna_sequence_length": 444, + "functions": [ + "FMN-binding protein MioC" + ], + "id": "CDS_3691", + "location": [ + [ + "NC_000913", + 3926455, + "-", + 444 + ] + ], + "md5": "9cf2c8b20e1b692c8ecb830ec347b0ff", + "parent_gene": "", + "protein_md5": "4bfc2ed15c60bb6bf4d68fc54f668b53", + "protein_translation": "MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDLPASGIWLVISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAIDKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWVNLLK", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + 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"dna_sequence_length": 993, + "functions": [ + "asparagine synthetase A" + ], + "id": "CDS_3693", + "location": [ + [ + "NC_000913", + 3927155, + "+", + 993 + ] + ], + "md5": "ffd86e3163f26565b24e11e03d686b37", + "parent_gene": "", + "protein_md5": "dfc2b4a3f3b43c8ba9564d8a53e155e1", + "protein_translation": "MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLDAKGRERAIAKDLGAVFLVGIGGKLSDGHRHDVRAPDYDDWSTPSELGHAGLNGDILVWNPVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLELEWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQCGVWPAAVRESVPSLL", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yieM" + ], + [ + "gene_synonym", + "ECK3739" + ], + [ + "gene_synonym", + "viaA" + ], + [ + "gene_synonym", + "GeneID:948257" + ], + [ + "gene_synonym", + "yieD" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADN0" + ], + [ + "gene_synonym", + "b3745" + ], + [ + "gene_synonym", + "ASAP:ABE-0012244" + ], + [ + "gene_synonym", + "YP_026243.1" + ], + [ + "gene_synonym", + "EcoGene:EG11730" + ], + [ + "gene_synonym", + "JW5610" + ], + [ + "gene_synonym", + "GI:49176398" + ] + ], + "dna_sequence": 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"ATGGCTCACCCTCATTTATTAGCGGAAAGAATTTCCCGCCTGAGCAGTTCGTTGGAAAAGGGGCTTTATGAACGTAGCCACGCCATCCGCTTGTGTTTATTAGCGGCATTAAGTGGTGAAAGTGTGTTCCTCCTTGGCCCGCCAGGTATTGCCAAAAGTTTGATCGCCCGGCGCTTAAAATTCGCCTTTCAGAATGCCCGCGCGTTTGAATATCTGATGACCCGCTTCTCCACGCCGGAAGAAGTTTTTGGTCCCCTTTCTATTCAGGCGCTAAAAGATGAAGGGCGCTATGAACGTTTAACCAGCGGTTACCTGCCGGAAGCAGAAATTGTCTTTCTGGATGAGATCTGGAAAGCGGGCCCGGCAATTCTTAATACCTTGCTCACCGCCATTAACGAGCGCCAGTTCCGCAACGGTGCACACGTAGAAAAAATCCCGATGCGTCTGCTGGTGGCGGCCTCCAACGAGCTGCCGGAAGCAGACAGCAGTCTGGAAGCGTTATATGACCGCATGCTGATTCGTCTGTGGTTAGATAAAGTGCAGGATAAAGCGAATTTCCGCTCCATGCTGACCAGTCAACAGGATGAAAACGACAATCCGGTTCCTGATGCCTTGCAGGTCACAGATGAAGAATATGAACGCTGGCAGAAAGAGATTGGTGAAATTACGCTGCCCGATCATGTATTTGAGCTGATTTTTATGCTGCGCCAGCAACTGGATAAATTACCGGATGCGCCTTATGTCTCGGATCGTCGCTGGAAAAAAGCGATCCGATTATTGCAGGCCAGCGCCTTTTTTAGCGGTCGCAGTGCTGTTGCCCCGGTAGATCTCATTTTGCTGAAAGATTGCCTGTGGTATGACGCGCAAAGCCTGAATTTGATACAACAACAAATTGATGTATTGATGACCGGTCACGCCTGGCAACAGCAAGGGATGTTGACTCGCCTTGGCGCGATTGTGCAACGTCACCTGCAACTCCAGCAGCAACAAAGCGATAAAACAGCCTTAACGGTAATTCGTCTGGGCGGCATTTTCAGCCGTCGTCAGCAGTATCAACTTCCTGTTAACGTTACTGCTTCCACTCTGACTCTACTGCTGCAAAAACCGTTAAAACTGCATGATATGGAAGTGGTTCATATCTCCTTTGAGCGTAGCGCGCTGGAACAGTGGCTGAGCAAAGGTGGTGAAATTCGCGGTAAACTGAACGGTATCGGCTTTGCCCAGAAACTGAATCTGGAAGTTGATAGCGCCCAACATCTTGTCGTTCGCGATGTAAGTTTACAAGGCAGTACGCTGGCACTTCCCGGTTCATCGGCTGAAGGTCTGCCTGGTGAAATAAAACAACAACTGGAAGAGCTTGAAAGCGACTGGCGCAAGCAACACGCTTTATTCAGCGAACAGCAAAAATGTCTGTTTATCCCTGGCGACTGGTTAGGTCGCATTGAAGCCAGCCTACAGGATGTCGGTGCACAGATTCGCCAGGCACAACAATGCTAA", 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"YP_026244.1" + ], + [ + "gene_synonym", + "GI:49176400" + ], + [ + "gene_synonym", + "ASAP:ABE-0012251" + ], + [ + "gene_synonym", + "ECK3741" + ], + [ + "gene_synonym", + "JW5609" + ], + [ + "gene_synonym", + "EcoGene:EG11541" + ], + [ + "gene_synonym", + "b3747" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63183" + ], + [ + "gene_synonym", + "GeneID:948255" + ], + [ + "gene_synonym", + "kup" + ] + ], + "dna_sequence": 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"NP_418209.1" + ], + [ + "gene_synonym", + "GeneID:948266" + ] + ], + "dna_sequence": "TTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGAACGCGGTTCGGCTTAG", + 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"GI:16131622" + ], + [ + "gene_synonym", + "b3754" + ], + [ + "gene_synonym", + "GeneID:948265" + ], + [ + "gene_synonym", + "EcoGene:EG11732" + ], + [ + "gene_synonym", + "hsrA" + ], + [ + "gene_synonym", + "NP_418210.1" + ] + ], + "dna_sequence": 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"ATGCCTTTAAGCGCACAACAGTTAGCTGCACAGAAAAACCTTTCGTATGTTCTGGCTGAGAAGCTGGCGCAACGGATCTTAAAAGGTGAATATGAACCCGGCACCATTTTGCCCGGTGAGATTGAGCTGGGCGAGCAATTTGGAGTGAGTCGTACAGCGGTACGCGAAGCGGTCAAAACGTTAACGGCAAAAGGGATGGTTTTACCGCGACCGCGAATTGGTACTCGGGTCATGCCACAATCGAACTGGAATTTTCTTGATCAGGAATTGCTTACCTGGTGGATGACAGAAGAGAACTTTCATCAGGTCATCGATCACTTTCTGGTTATGCGTATCTGTCTGGAGCCGCAAGCCTGCCTACTGGCAGCAACGGTTGGCACCGCGGAACAGAAAGCGCATCTCAATACGTTAATGGCCGAAATGGCGGCATTAAAAGAGAACTTTCGCCGTGAACGCTGGATCGAAGTCGATATGGCCTGGCATGAGCATATCTATGAAATGAGCGCCAATCCGTTTTTGACCTCATTCGCCTCGCTATTCCATTCGGTTTATCACACTTACTTCACGTCAATTACCAGCGACACAGTGATAAAGCTGGATCTGCATCAGGCGATTGTCGATGCGATTATCCAAAGCGATGGCGACGCGGCATTTAAAGCTTGTCAGGCGCTGCTACGCTCACCTGATAAGTGA", + "dna_sequence_length": 693, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_3704", + "location": [ + [ + "NC_000913", + 3941327, + "-", + 693 + ] + ], + "md5": "3a7a1fe52591822c7aa8898829c5d857", + "parent_gene": "", + "protein_md5": "a5ae3776a8b5c14e52624dd28e568860", + 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"EcoGene:EG14474" + ], + [ + "gene_synonym", + "YP_002791259.1" + ], + [ + "gene_synonym", + "GI:226524760" + ], + [ + "gene_synonym", + "GeneID:7751639" + ], + [ + "gene_synonym", + "ECK4484" + ], + [ + "gene_synonym", + "b4669" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P619" + ] + ], + "dna_sequence": "ATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAA", + "dna_sequence_length": 51, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3709", + "location": [ + [ + "NC_000913", + 3950507, + "+", + 51 + ] + ], + "md5": "44028cea3369f75213f9c47d7c93c9fe", + "parent_gene": "", + "protein_md5": "b4ff8754ddd5cb345c036c16fef620d6", + "protein_translation": "MNNSTKFCFSRFRTGN", + "protein_translation_length": 16, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK3760" + ], + [ + "gene_synonym", + "b4488" + ], + [ + "gene_synonym", + "ASAP:ABE-0174552" + ], + [ + "gene_synonym", + "ASAP:ABE-0012309" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00892" + ], + [ + "gene_synonym", + "ilvO" + ], + [ + "gene_synonym", + "ASAP:ABE-0012311" + ], + [ + "gene_synonym", + "GeneID:2847699" + ], + [ + "gene_synonym", + "ilvG" + ], + [ + "gene_synonym", + "EcoGene:EG10498" + ], + [ + "gene_synonym", + "JW3741" + ], + [ + "gene_synonym", + "JW3740" + ] + ], + "dna_sequence": "ATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTATGCCGACATGAGCAGGGTGCGGCAATGGCGGCTATCGGTTATGCTCGTGCTACCGGCAAAACTGGCGTATGTATCGCCACGTCTGGTCCGGGCGCAACCAACCTGATAACCGGGCTTGCGGACGCACTGTTAGATTCCATCCCTGTTGTTGCCATCACCGGTCAAGTGTCCGCACCGTTTATCGGCACTGACGCATTTCAGGAAGTGGATGTCCTGGGATTGTCGTTAGCCTGTACCAAGCACAGCTTTCTGGTGCAGTCGCTGGAAGAGTTGCCGCGCATCATGGCTGAAGCATTCGACGTTGCCTGCTCAGGTCGTCCTGGTCCGGTTCTGGTCGATATCCCAAAAGATATCCAGTTAGCCAGCGGTGACCTGGAACCGTGGTTCACCACCGTTGAAAACGAAGTGACTTTCCCACATGCCGAAGTTGAGCAAGCGCGCCAGATGCTGGCAAAAGCGCAAAAACCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCACCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAACTTCGCGGTGCAGGAGTGTGACCTGCTGATCGCCGTGGGCGCACGTTTTGATGACCGGGTGACCGGCAAACTGAACACCTTCGCGCCACACGCCAGTGTTATCCATATGGATATCGACCCGGCAGAAATGAACAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGAGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGTTTAGGTACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCACAAGTCGCGCGACCGAACGATACCGTTGTCTGTATCTCCGGTGACGGCTCTTTCATGATGAATGTGCAAGAGCTGGGCACCGTAAAACGCAAGCAGTTACCGTTGAAAATCGTCTTACTCGATAACCAACGGTTAGGGATGGTTCGACAATGGCAGCAACTGTTTTTTCAGGAACGATACAGCGAAACCACCCTTACTGATAACCCCGATTTCCTCATGTTAGCCAGCGCCTTCGGCATCCATGGCCAACACATCACCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGAACGTCTGGCCGCTGGTGCCGCCTGGCGCCAGTAATTCAGAAATGTTGGAGAAATTATCATGA", 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"gene_synonym", + "EcoGene:EG10497" + ], + [ + "gene_synonym", + "ECK3762" + ], + [ + "gene_synonym", + "ASAP:ABE-0012316" + ], + [ + "gene_synonym", + "b3770" + ], + [ + "gene_synonym", + "YP_026247.1" + ], + [ + "gene_synonym", + "GI:49176403" + ], + [ + "gene_synonym", + "GeneID:948278" + ], + [ + "gene_synonym", + "ilvE" + ], + [ + "gene_synonym", + "JW5606" + ] + ], + "dna_sequence": 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"GTGGCGATTAATTTCAGCCCTAAGGTTGGTGAAATACTGGAATGCAACTTTGGTAACTATCCTGTTAGCCAAAATGGACCGTTCAGCACGACGTATTACGATGGCCGCATTCCTCCTGAAATGATAAAAAACAGGTTAGTTGTCGTGCTCAACGGAAAAATTAATGGCAACGCATGCATCGTCGTTCCATTATCAACCACTCGCGACCCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTAATGTTATCAATGACCTGCAATTCTTTGATCAGCAGATTCGTTGGGCCAAAGCCGACCTGGTACAACAAGTCAGTCGAAACAGATTAAACAGAGCAAGGACTTACAGAGGGTATCTTAATCAATGTTTGCCACATGAGTTGGTTGCAGACATACAGAGGGCGGTCATCAAGTCAATCAATGCCATATCGCTCATAAATTGA", + "dna_sequence_length": 450, + "id": "CDS_3718", + "location": [ + [ + "NC_000913", + 3960460, + "-", + 207 + ], + [ + "NC_000913", + 3960254, + "-", + 243 + ] + ], + "md5": "a80fdd62e350772f92ca485affadf209", + "parent_gene": "", + "protein_md5": "65918b95b9cb1060104578ceb6f12550", + "protein_translation": "VAINFSPKVGEILECNFGNYPVSQNGPFSTTYYDGRIPPEMIKNRLVVVLNGKINGNACIVVPLSTTRDPDKLKRGMHVEIASNVINDLQFFDQQIRWAKADLVQQVSRNRLNRARTYRGYLNQCLPHELVADIQRAVIKSINAISLIN", + "protein_translation_length": 149, + "type": "CDS" + }, + { + "aliases": [ + [ + 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"gene_synonym", + "atsA" + ], + [ + "gene_synonym", + "aslA" + ], + [ + "gene_synonym", + "NP_418245.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0012411" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25549" + ], + [ + "gene_synonym", + "EcoGene:EG10089" + ], + [ + "gene_synonym", + "JW3773" + ], + [ + "gene_synonym", + "GI:16131653" + ] + ], + "dna_sequence": 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"NP_418246.1" + ], + [ + "gene_synonym", + "GeneID:948311" + ], + [ + "gene_synonym", + "ECK3796" + ], + [ + "gene_synonym", + "ASAP:ABE-0012417" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACB7" + ], + [ + "gene_synonym", + "hemY" + ], + [ + "gene_synonym", + "GI:16131654" + ], + [ + "gene_synonym", + "b3802" + ], + [ + "gene_synonym", + "JW3774" + ], + [ + "gene_synonym", + "EcoGene:EG10434" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK3797" + ], + [ + "gene_synonym", + "hemX" + ], + [ + "gene_synonym", + "GI:16131655" + ], + [ + "gene_synonym", + "b3803" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09127" + ], + [ + "gene_synonym", + "JW3775" + ] + ], + "dna_sequence": 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"GI:16131656" + ], + [ + "gene_synonym", + "b3804" + ], + [ + "gene_synonym", + "EcoGene:EG10430" + ], + [ + "gene_synonym", + "ASAP:ABE-0012425" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09126" + ], + [ + "gene_synonym", + "JW3776" + ] + ], + "dna_sequence": 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"protein_md5": "2bdb56bd10d40c90391ee7b0246b6286", + "protein_translation": "MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPELQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQAREVTMVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDALLRALQ", + "protein_translation_length": 246, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:947759" + ], + [ + "gene_synonym", + "ECK3799" + ], + [ + "gene_synonym", + "ASAP:ABE-0012427" + ], + [ + "gene_synonym", + "popE" + ], + [ + "gene_synonym", + "hemC" + ], + [ + "gene_synonym", + "JW5932" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06983" + ], + [ + "gene_synonym", + "YP_026260.1" + ], + [ + "gene_synonym", + "GI:49176416" + ], + [ + "gene_synonym", + "EcoGene:EG10429" + ], + [ + "gene_synonym", + "b3805" + ] + ], + "dna_sequence": 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"hydroxymethylbilane synthase" + ], + "id": "CDS_3742", + "location": [ + [ + "NC_000913", + 3990766, + "-", + 942 + ] + ], + "md5": "61cecbc3b88eafef7e6e9d79dd6d5a06", + "parent_gene": "", + "protein_md5": "e821f2f40f67955d52f2418a6c928b16", + "protein_translation": "MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA", + "protein_translation_length": 313, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_418250.1" + ], + [ + "gene_synonym", + "GeneID:947755" + ], + [ + "gene_synonym", + "ASAP:ABE-0012432" + ], + [ + "gene_synonym", + "JW3778" + ], + [ + "gene_synonym", + "cya" + ], + [ + "gene_synonym", + "ECK3800" + ], + [ + "gene_synonym", + "cyaA" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00936" + ], + [ + "gene_synonym", + "EcoGene:EG10170" + ], + [ + "gene_synonym", + "GI:16131658" + ], + [ + "gene_synonym", + "b3806" + ] + ], + "dna_sequence": "TTGTACCTCTATATTGAGACTCTGAAACAGAGACTGGATGCCATAAATCAATTGCGTGTGGATCGCGCGCTTGCTGCTATGGGGCCTGCATTCCAACAGGTCTACAGTCTACTGCCGACATTGTTGCACTATCACCATCCGCTAATGCCGGGTTACCTTGATGGTAACGTTCCCAAAGGCATTTGCCTTTACACGCCTGATGAAACTCAACGCCACTACCTGAACGAGCTTGAACTGTATCGTGGAATGTCAGTACAGGATCCGCCGAAAGGTGAGCTTCCAATTACTGGTGTATACACCATGGGCAGCACCTCGTCCGTAGGGCAAAGTTGTTCCTCTGACCTGGATATCTGGGTCTGTCATCAATCCTGGCTCGATAGCGAAGAGCGCCAATTGCTACAACGTAAATGTAGCCTGCTGGAAAACTGGGCCGCCTCGCTGGGTGTGGAAGTCAGCTTCTTCCTGATTGATGAAAACCGCTTCCGTCATAATGAAAGCGGCAGCCTGGGGGGCGAAGATTGTGGCTCCACCCAGCATATACTGCTGCTTGACGAATTTTATCGTACCGCCGTGCGTCTCGCCGGTAAGCGTATTCTGTGGAATATGGTGCCGTGCGACGAAGAAGAGCATTACGACGACTATGTGATGACGCTTTACGCGCAGGGCGTGCTGACGCCAAATGAATGGCTGGATCTCGGTGGCTTAAGCTCGCTTTCTGCTGAAGAGTACTTTGGTGCCAGCCTTTGGCAGCTCTACAAGAGTATCGATTCCCCATACAAAGCGGTACTGAAAACACTGCTGCTGGAAGCCTATTCCTGGGAATACCCGAACCCACGTCTGCTGGCGAAAGATATCAAACAGCGTTTGCACGACGGCGAGATTGTATCGTTTGGTCTCGATCCATACTGCATGATGCTGGAGCGTGTTACTGAATACCTGACGGCGATTGAAGATTTTACCCGTCTGGATTTAGTACGTCGCTGCTTCTATTTAAAAGTGTGCGAAAAGCTCAGCCGTGAACGCGCCTGCGTAGGCTGGCGTCGCGCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCAGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCGTCTCCGCCAGTCCGCAGGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAATTACCGGCGGTGGTGGACGGCTTTGCCAGCGAAGGGATCATCCAGTTCTTTTTCGAAGAAACGCAAGACGAGAATGGCTTTAATATCTACATTCTCGACGAAAGCAACCGGGTTGAGGTATATCACCACTGCGAAGGCAGCAAAGAGGAGCTGGTACGTGACGTCAGTCGCTTCTACTCGTCATCGCATGACCGTTTTACCTACGGCTCAAGCTTCATCAACTTCAACCTGCCGCAGTTCTATCAGATTGTGAAGGTTGATGGTCGTGAACAGGTGATTCCGTTCCGCACAAAATCTATCGGTAACATGCCGCCTGCCAATCAGGATCACGATACGCCGCTATTACAGCAATATTTTTCGTGA", 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"protein_translation_length": 126, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yigG" + ], + [ + "gene_synonym", + "EcoGene:EG11465" + ], + [ + "gene_synonym", + "GI:90111651" + ], + [ + "gene_synonym", + "GeneID:948344" + ], + [ + "gene_synonym", + "NP_418262.2" + ], + [ + "gene_synonym", + "ECK3812" + ], + [ + "gene_synonym", + "b3818" + ], + [ + "gene_synonym", + "ASAP:ABE-0012468" + ], + [ + "gene_synonym", + "JW5590" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27843" + ] + ], + "dna_sequence": "ATGTTACGTATATTTATCCCAACATCTAACGGTAAGATTTCCAGACGTCGTTATATATTTTCATTTATTTTAATAAATTTCATTTTTGCCTTTCTTATTATCTTTTTTAACGATGGAGAAGCAGGCTTTCTTGTTATAGTCTCTACCATCGTACTCCATTATCTCGTCATCAACATGAATTGCCAGCGACTCCGTGATAGTGGTTTCATCTATATAAAAACTTATGTTTTTGGTACATTAGCAGTATATATCATCTCTATCATCACAATGATAGCCGAAGATTTTGCCTGTTCAGGCAATGGTTCGATGATTTTTTTGATTTGTTATTTTTCCACTTTCAGTATGCTAATGCTTGCACCTACTGATTCATCAAAACAATAG", + "dna_sequence_length": 381, + "functions": [ + "PRK11371 family inner membrane 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"gene_synonym", + "EcoGene:EG10584" + ], + [ + "gene_synonym", + "GeneID:948323" + ], + [ + "gene_synonym", + "NP_418273.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25665" + ] + ], + "dna_sequence": 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"MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRAPTGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLDEVDEALALGHKVKPVLLGPVTWLWLGKVKGEQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAYDALQGQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVAELHKRLPSDWLLSAGLINGRNVWRADLTEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSVETRLDAEVKSWFAFALQKCHELALLRDALNSGDTAALAEWSAPIQARRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLRRG", + "protein_translation_length": 753, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b3830" + ], + [ + "gene_synonym", + "ysgA" + ], + [ + "gene_synonym", + "YP_026268.1" + ], + [ + "gene_synonym", + "ECK3824" + ], + [ + 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membrane protein, inner membrane acyltransferase" + ], + "id": "CDS_3791", + "location": [ + [ + "NC_000913", + 4046602, + "-", + 933 + ] + ], + "md5": "286eaa1439646be5567ba85e96f395dc", + "parent_gene": "", + "protein_md5": "2e6af8067c3570f99be06c87394bbcd2", + "protein_translation": "MANLLNKFIMTRILAAITLLLSIVLTILVTIFCSVPIIIAGIVKLLLPVPVIWRKVSRFCDFMMYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICNHRSWADIVVLCVLFRKHIPMNKYFLKQQLAWVPFLGLACWSLDMPFMKRYSRAYLLRHPERRGKDVETTRRSCEKFRLHPTTIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIAMALNVLGKQFDKLLNVTLCYPDNNRQPFFDMLSGKLTRIVVHVDLQPIADELHGDYINDKSFKRHFQQWLNSLWQEKDRLLTSLMSSQRQNK", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK3855" + ], + [ + "gene_synonym", + "GI:16131704" + ], + [ + "gene_synonym", + "JW3835" + ], + [ + "gene_synonym", + "NP_418300.1" + ], + [ + "gene_synonym", + "EcoGene:EG10746" + ], + [ + "gene_synonym", + "polA" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00582" + ], + [ + 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[ + "gene_synonym", + "GI:16131712" + ], + [ + "gene_synonym", + "yihL" + ], + [ + "gene_synonym", + "ASAP:ABE-0012651" + ], + [ + "gene_synonym", + "JW3843" + ], + [ + "gene_synonym", + "ECK3865" + ], + [ + "gene_synonym", + "GeneID:948368" + ], + [ + "gene_synonym", + "b3872" + ], + [ + "gene_synonym", + "NP_418308.1" + ], + [ + "gene_synonym", + "EcoGene:EG11838" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACM9" + ] + ], + "dna_sequence": "ATGGCGGAGAATCAATCCACCGTAGAAAATGCAAAAGAGAAACTGGATCGGTGGTTGAAAGATGGCATCACCACGCCGGGTGGAAAACTCCCTTCAGAAAGAGAGCTGGGAGAACTGCTGGGCATTAAACGTATGACGCTGCGCCAGGCGTTGTTGAACCTCGAGGCAGAATCCAAAATCTTCCGTAAGGATCGTAAGGGGTGGTTCGTGACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTGGGGGGCGCTGGAAGGACATAAAGTTTTCTATCACGAAACATATATTAATCCTGAAGTTGCTCCGGGCTTTATTGAACAACTTGAAAACCACTCATTTTCTGCAGTCTGGGAAAAGTGCTACCAAAAAGAGACGGTAGTAAAAAAATTGATTTTCAAACCCGTCAGAATGCCGGGCGATATCAGCAAGTATCTTGGCGGTTCTGCGGGTATGCCAGCGATCTTAATTGAAAAGCATCGCGCCGACCAGCAAGGCAATATTGTCCAAATAGATATTGAATATTGGCGATTTGAGGCCGTAGACCTCATCATTAATCTGTAG", + "dna_sequence_length": 711, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_3801", + "location": [ + [ + "NC_000913", + 4060447, + "+", + 711 + ] + ], + "md5": "5e90e6c2d1545fd8c809cfbd5bf896d1", + "parent_gene": "", + "protein_md5": 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"gene_synonym", + "JW3845" + ], + [ + "gene_synonym", + "b3874" + ], + [ + "gene_synonym", + "NP_418310.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32135" + ] + ], + "dna_sequence": "ATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGACCAATGGTCAAATTGGTAATGCTATGTCGGTAAACTCATTTGTCACCACAGTGGGCTTTTTTCTGTCTATTTATTTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTATTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGGGCAATAGCGAACAACAAGGTCGGTTGTTTGGCTTCTTCGAAACAGGGCGTGGCATTGTCGATACCGTGGTGGCATTTTCTGCGTTGGCAGTATTTACCTGGTTTGGCAGTGGCTTATTAGGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCATTATTATTTTCTTTGTCCTGAATGACAAAGAAGAGGCACCGTCCGTTGAGGTGAAAAAAGAAGACGGAGCATCGAAAAACACCAGTATGACCTCGGTGCTGAAAGACAAAACTATCTGGCTTATCGCTTTTAACGTCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGCTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTAAATATCTATGCTACACCTTTATCATTAGTACCGCTGCGCTCGTACTGTTGATTATGCTGCCGCACGAAAGTATGCCGGTCTATTTAGGGATGGCATGTACGCTGGGCTTTGGCGCGATAGTCTTTACACAGCGAGCCGTATTTTTTGCACCTATCGGCGAAGCAAAAATTGCTGAAAATAAAACAGGTGCGGCGATGGCGTTGGGTAGCTTTATTGGTTACGCTCCGGCGATGTTCTGCTTCAGTCTGTATGGCTACATTCTGGATTTAAATCCGGGGATTATTGGCTACAAAATCGTGTTTGGCATTATGGCCTGCTTCGCATTCAGTGGTGCGGTGGTTTCCGTAATGCTGGTTAAGCGTATTAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAA", 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"gene_synonym", + "ASAP:ABE-0012659" + ], + [ + "gene_synonym", + "JW3846" + ], + [ + "gene_synonym", + "ECK3868" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76773" + ], + [ + "gene_synonym", + "b3875" + ], + [ + "gene_synonym", + "ompL" + ], + [ + "gene_synonym", + "NP_418311.1" + ] + ], + "dna_sequence": "ATGAAAAAGATTAATGCAATAATTTTATTATCTTCTCTGACCTCTGCCTCGGTATTTGCTGGCGCATACGTCGAAAACAGGGAGGCATATAATCTTGCCTCCGATCAGGGCGAGGTTATGCTACGTGTGGGTTATAACTTCGATATGGGCGCGGGTATTATGTTAACCAATACCTACAACTTTCAGCGAGAAGATGAACTAAAACATGGATATAACGAAATTGAAGGCTGGTATCCGTTATTTAAACCAACCGATAAATTAACCATCCAGCCCGGTGGCTTAATTAATGATAAGAGTATCGGTTCGGGTGGTGCAGTGTATCTGGACGTCAACTATAAATTTGTACCATGGTTTAATCTGACAGTACGAAATCGCTATAACCATAATAACTATAGTTCAACAGATTTGAGCGGGGAACTGGATAATAATGACACCTATGAAATTGGCACCTACTGGAATTTTAAAATCACCGATAAATTTTCCTATACATTTGAGCCACATTACTTCATGCGAGTGAATGACTTTAATAGTAGCAACGGGAAAGATCATCATTGGGAAATCACTAACACCTTCCGTTACCGTATTAATGAACACTGGCTCCCTTATTTCGAATTGCGCTGGTTAGACCGCAACGTCGAACCGTACCACCGCGAGCAAAACCAGATCCGTATCGGGACGAAGTATTTCTTCTGA", + "dna_sequence_length": 693, + "functions": [ + "outer membrane porin L", + "putative sulpholipid porin" + ], + "id": "CDS_3804", + "location": [ + [ + "NC_000913", + 4064295, + "-", + 693 + ] + ], + "md5": "fa68008fd664532ecd2008f7a04ca145", + "parent_gene": "", + "protein_md5": 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"ATGTCTGACCATAATCCACTGACATTAAAACTGAATCTGCGGGAAAAAATCGCCTATGGTATGGGCGACGTCGGTTCGAATTTAATGCTCTGCATCGGTACTCTGTATCTCCTCAAATTTTATACCGATGAATTAGGGATGCCTGCTTACTATGGCGGGATTATCTTTCTGGTGGCGAAGTTTTTTACCGCGTTTACCGATATGCTCACCGGATTTTTACTCGACTCGCGGAAAAATATTGGGCCTAAAGGCAAATTTCGTCCCTTTATTTTATATGCAGCGGTTCCGGCGGCGTTAATTGCAACGCTCCAGTTTATCGCCACCACCTTTTGTTTGCCGGTTAAAACGACGATTGCCACCGCGCTGTTTATGATGTTTGGACTTTCATACAGTCTGATGAACTGCTCGTATGGTGCGATGATCCCGGCAATTACCAAAAACCCGAATGAGCGCGCGCAGCTCGCGGCTTACCGCCAGGGTGGTGCAACCATAGGGCTATTGATTTGTACCGTGGCGTTTATTCCGTTGCAGTCGCTTTTTTCTGACTCAACCGTCGGTTATGCCTGTGCGGCACTTATGTTCTCCATTGGCGGCTTTATTTTTATGATGCTGTGCTACAGAGGCGTCAAAGAGCATTATGTGGACACAACGCCAACCGGACATAAAGCCAGTATTCTCAAATCATTTTGCGCGATATTTCGGAATCCGCCATTGCTGGTTTTATGCATTGCTAACTTGTGTACCCTGGCGGCATTTAATATCAAACTGGCGATTCAGGTCTATTACACCCAGTATGTGCTGAATGATATTAATTTATTGTCGTGGATGGGATTCTTCAGTATGGGATGCATCCTCATCGGCGTATTACTGGTGCCATTAACTGTAAAATGTTTTGGTAAAAAACAGGTTTATCTGGCTGGCATGGTGCTGTGGGCGGTGGGTGATATACTGAATTATTTCTGGGGAAGTAACTCTTTCACTTTCGTCATGTTCTCTTGTGTCGCCTTTTTTGGCACGGCCTTTGTAAACAGCCTGAACTGGGCACTGGTACCAGATACCGTAGATTACGGTGAATGGAAAACCGGTATTCGTGCCGAAGGTTCTGTTTATACCGGTTATACCTTCTTTCGTAAAATTTCTGCCGCACTTGCTGGCTTCTTGCCAGGCATTATGCTGACGCAAATTGGTTATGTTCCCAACATCGCGCAAAGCGATGCGACATTACAGGGTTTGCGTCAGCTCATTTTTATCTGGCCTTGTGCACTGGCAATTATTGCTGCATTGACGATGGGATTCTTTTACACACTCAATGAAAAACGGTTTGCATTGATTATTGAGGAAATCAACCAACGCAAAAATAAAGAGATGGCGACAGAAGAAAAAACGGCTTCCGTAACGTTATAA", + "dna_sequence_length": 1404, + "functions": [ + "putative sulphoquinovose importer" + ], + "id": "CDS_3805", + "location": [ + [ + "NC_000913", + 4065766, + "-", + 1404 + ] + ], + "md5": "f64eaeadf437895a552949bbecc2e798", + "parent_gene": "", + "protein_md5": "88a5d2b1978bfe72c6b521d901c6032a", + "protein_translation": "MSDHNPLTLKLNLREKIAYGMGDVGSNLMLCIGTLYLLKFYTDELGMPAYYGGIIFLVAKFFTAFTDMLTGFLLDSRKNIGPKGKFRPFILYAAVPAALIATLQFIATTFCLPVKTTIATALFMMFGLSYSLMNCSYGAMIPAITKNPNERAQLAAYRQGGATIGLLICTVAFIPLQSLFSDSTVGYACAALMFSIGGFIFMMLCYRGVKEHYVDTTPTGHKASILKSFCAIFRNPPLLVLCIANLCTLAAFNIKLAIQVYYTQYVLNDINLLSWMGFFSMGCILIGVLLVPLTVKCFGKKQVYLAGMVLWAVGDILNYFWGSNSFTFVMFSCVAFFGTAFVNSLNWALVPDTVDYGEWKTGIRAEGSVYTGYTFFRKISAALAGFLPGIMLTQIGYVPNIAQSDATLQGLRQLIFIWPCALAIIAALTMGFFYTLNEKRFALIIEEINQRKNKEMATEEKTASVTL", + "protein_translation_length": 467, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW3848" + ], + [ + "gene_synonym", + "ECK3870" + ], + [ + "gene_synonym", + "EcoGene:EG11842" + ], + [ + "gene_synonym", + "GeneID:948371" + ], + [ + "gene_synonym", + "NP_418313.4" + ], + [ + "gene_synonym", + "squP" + ], + [ + "gene_synonym", + "b3877" + ], + [ + "gene_synonym", + "GI:145698335" + ], + [ + "gene_synonym", + "ASAP:ABE-0012664" + ], + [ + "gene_synonym", + "yihP" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32137" + ] + ], + "dna_sequence": 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sulphoquinovose mutarotase" + ], + "id": "CDS_3808", + "location": [ + [ + "NC_000913", + 4070401, + "-", + 927 + ] + ], + "md5": "fc61b1321beca015e4ed81788e24f5d9", + "parent_gene": "", + "protein_md5": "a48761ec0424bffbccb1f5fcda6e7a6d", + "protein_translation": "MSLIKVPCMQITNMHCSGQTVSLAAGDYHATIVTVGAGLAELTFQGCHLVIPHKPEEMPLAHLGKVLIPWPNRIANGCYRYQGQEYQLPINEHSSKAAIHGLLAWRDWQISELTATSVTLTAFLPPSYGYPFMLASQVVYSLNAHTGLSVEIASQNIGTVAAPYGVGIHPYLTCNLTSVDEYLFQLPANQVYAVDEHANPTTLHHVDELDLNFTQAKKIAATKIDHTFKTANDLWEMTITHPQQALSVSLCSDQLWVQVYSGEKLQRQGLAVEPMSCPPNAFNSGIDLLLLESGKPHRLFFNIYGQRK", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG11845" + ], + [ + "gene_synonym", + "ECK3873" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32140" + ], + [ + "gene_synonym", + "GI:90111658" + ], + [ + "gene_synonym", + "NP_418316.4" + ], + [ + "gene_synonym", + "GeneID:948374" + ], + [ + "gene_synonym", + "squS" + ], + [ + "gene_synonym", + "b3880" + ], + [ + "gene_synonym", + "ASAP:ABE-0012673" + ], + [ + "gene_synonym", + "yihS" + ], + [ + "gene_synonym", + "JW5569" + ], + [ + "gene_synonym", + "manC?" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:948372" + ], + [ + "gene_synonym", + "yihU" + ] + ], + "dna_sequence": "ATGGCAGCAATCGCGTTTATCGGTTTAGGACAAATGGGTTCGCCAATGGCGAGCAATTTATTGCAGCAAGGGCATCAACTTCGCGTCTTTGATGTGAACGCCGAAGCTGTGCGGCATCTGGTAGACAAAGGTGCGACTCCCGCCGCCAACCCGGCGCAGGCCGCTAAAGATGCCGAATTTATCATTACCATGTTGCCGAATGGCGATCTGGTGCGCAACGTGTTGTTCGGTGAAAACGGCGTTTGCGAAGGCTTATCTACCGATGCGCTGGTCATTGATATGTCCACCATCCATCCGCTGCAAACCGATAAATTGATTGCCGATATGCAAGCCAAAGGCTTCAGCATGATGGATGTTCCGGTAGGCCGTACTTCTGCAAATGCCATTACCGGTACTCTGTTACTGCTGGCTGGCGGCACCGCTGAACAAGTTGAACGTGCCACACCGATCCTGATGGCGATGGGCAGTGAGTTGATCAACGCTGGCGGTCCGGGCATGGGGATCCGCGTTAAGCTCATCAACAACTACATGAGCATCGCGCTCAATGCGCTTTCGGCAGAAGCCGCCGTTTTGTGCGAAGCCCTGAATCTTCCCTTCGATGTTGCCGTCAAAGTGATGAGCGGTACCGCCGCCGGTAAAGGTCACTTCACCACTTCCTGGCCAAACAAAGTCCTCAGCGGAGATCTTTCTCCCGCCTTCATGATCGATCTTGCCCATAAGGATCTTGGCATCGCCCTTGATGTCGCCAACCAGCTGCATGTGCCAATGCCGCTGGGGGCCGCCTCACGGGAGGTTTATAGCCAGGCGCGCGCAGCGGGTCGCGGTCGCCAGGACTGGTCCGCCATTCTGGAACAGGTCCGTGTCAGTGCCGGGATGACTGCCAAAGTAAAAATGTAA", + 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"90838caf8070bea2226dbb6383a94ca9", + "parent_gene": "", + "protein_md5": "ed29993cf859e7bc56aba9437df4de6f", + "protein_translation": "MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLMQIMGTPQLARILHPFVGVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVGDTGRYNFGQKCVFWAAIIFLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVALIVVIMVHIYAALWVKGTITAMVEGWVTSAWAKKHHPRWYREVRKTTEKKAE", + "protein_translation_length": 211, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK3886" + ], + [ + "gene_synonym", + "GI:16131733" + ], + [ + "gene_synonym", + "fdoH" + ], + [ + "gene_synonym", + "GeneID:948395" + ], + [ + "gene_synonym", + "JW3864" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAJ5" + ], + [ + "gene_synonym", + "b3893" + ], + [ + "gene_synonym", + "EcoGene:EG11857" + ], + [ + "gene_synonym", + "ASAP:ABE-0012708" + ], + [ + "gene_synonym", + "NP_418329.1" + ] + ], + "dna_sequence": "ATGGCTTATCAATCTCAAGATATCATTCGTCGTTCCGCGACTAACGGTCTGACCCCCGCGCCTCAGGCGCGGGACTTCCAGGAAGAAGTGGCGAAACTCATCGACGTTACCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCAGAGTGGAACGACATTCGCGATACCGTCGGCAATAACATTGGGGTGTACGACAACCCCAATGATTTAAGCGCCAAATCGTGGACGGTAATGCGCTTCTCGGAAGTGGAGCAGAACGACAAACTGGAATGGCTGATCCGCAAAGACGGCTGTATGCACTGTTCCGATCCAGGCTGCCTGAAAGCGTGCCCGGCGGAAGGTGCAATTATTCAGTATGCCAACGGTATCGTCGACTTCCAGTCCGAGCAGTGCATTGGCTGCGGTTATTGCATTGCGGGCTGTCCGTTCGACATTCCGCGCCTCAACCCGGAAGACAACCGCGTCTACAAATGTACGCTGTGCGTTGACCGCGTGGTGGTTGGGCAAGAACCAGCCTGCGTGAAGACCTGCCCAACGGGCGCGATTCACTTCGGTACGAAAGAGTCGATGAAAACGCTGGCGAGCGAGCGCGTTGCTGAGCTGAAAACCCGCGGTTACGACAATGCGGGTCTGTACGATCCGGCAGGCGTCGGTGGTACACACGTCATGTACGTGCTGCACCATGCTGACAAGCCAAATCTGTATCATGGCTTGCCGGAGAACCCGGAAATCAGCGAAACCGTGAAATTCTGGAAAGGCATCTGGAAACCGCTCGCGGCTGTTGGCTTTGCGGCTACCTTTGCGGCCAGTATCTTCCACTACGTGGGTGTCGGTCCGAACCGTGCGGATGAGGAAGAGAATAATCTGCACGAAGAGAAAGACGAGGAGCGCAAATGA", + "dna_sequence_length": 903, + "functions": [ + "formate dehydrogenase-O, Fe-S subunit" + ], 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"ATGCAGGTCAGCAGAAGGCAGTTCTTTAAGATCTGCGCTGGCGGTATGGCAGGCACCACGGCAGCGGCACTGGGTTTTGCACCCAGCGTAGCACTCGCGGAAACCCGGCAGTATAAACTGCTGCGCACCCGCGAAACCCGTAATACCTGCACCTATTGTTCCGTAGGCTGTGGGCTGTTGATGTACAGCCTCGGTGACGGAGCAAAAAACGCCAAAGCATCTATCTTCCATATCGAAGGCGATCCGGATCACCCGGTCAACCGCGGTGCACTTTGTCCGAAAGGCGCTGGCCTGGTGGATTTCATCCACTCCGAAAGCCGTCTGAAGTTTCCGGAATACCGTGCGCCAGGTTCTGATAAATGGCAGCAAATCAGTTGGGAAGAGGCGTTTGATCGCATCGCCAAACTGATGAAAGAAGACCGCGATGCTAACTACATTGCGCAAAACGCCGAAGGCGTGACTGTTAACCGCTGGCTCTCCACCGGGATGCTGTGTGCTTCCGCGTCGAGTAACGAAACCGGCTATTTAACGCAAAAATTCTCCCGCGCGCTGGGTATGCTCGCGGTCGACAACCAGGCGCGTGTCTGACACGGACCAACGGTAGCAAGTCTTGCTCCAACATTTGGTCGCGGTGCGATGACCAACCACTGGGTCGACATCAAGAACGCCAACCTCGTCGTGGTGATGGGCGGTAACGCCGCTGAAGCTCACCCGGTCGGGTTCCGCTGGGCGATGGAAGCCAAAATTCACAACGGCGCGAAGCTGATTGTGATCGATCCTCGCTTTACGCGTACGGCGGCGGTAGCTGACTACTATGCCCCTATTCGTTCCGGTACTGACATTGCTTTCCTGTCAGGCGTATTGCTGTACCTGCTGAACAATGAAAAATTCAACCGCGAATACACCGAAGCCTATACCAACGCCAGCCTGATCGTGCGTGAGGATTACGGCTTTGAAGATGGCCTGTTCACCGGCTACGACGCGGAAAAACGCAAGTACGATAAATCCTCCTGGACTTATGAACTGGACGAAAACGGCTTCGCCAAACGCGATACCACGCTGCAACATCCGCGCTGCGTGTGGAACTTGCTGAAACAGCACGTTTCCCGCTACACGCCAGATGTGGTTGAAAACATCTGTGGTACGCCAAAAGACGCGTTCCTGAAAGTCTGCGAATACATCGCAGAAACCAGTGCTCACGATAAAACTGCCTCGTTCCTGTATGCCCTCGGCTGGACGCAACACTCCGTTGGTGCGCAAAACATTCGTACGATGGCGATGATCCAGCTGCTGCTCGGCAATATGGGGATGGCAGGCGGCGGCGTTAACGCCCTGCGCGGTCACTCCAATATTCAGGGGCTGACGGACCTGGGGCTGCTGTCGCAGAGCCTGCCAGGTTACATGACGCTGCCAAGCGAGAAGCAGACCGATCTGCAAACCTACCTTACCGCCAACACGCCAAAACCGCTGCTGGAAGGCCAGGTAAACTACTGGGGCAACTACCCGAAATTCTTCGTCTCTATGATGAAGGCCTTCTTTGGTGATAAAGCGACGGCGGAAAATAGCTGGGGCTTTGACTGGTTGCCGAAGTGGGATAAAGGCTACGACGTCCTGCAATACTTCGAGATGATGAAAGAGGGCAAGGTCAATGGCTATATCTGCCAGGGCTTTAACCCTGTTGCCTCATTCCCGAACAAAAACAAAGTGATCGGTTGTCTGTCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTAACTTCTGGCAGAACCACGGTGAGCTGAACGAAGTTGACTCGTCGAAGATCCAGACCGAAGTGTTCCGTCTGCCATCGACCTGCTTCGCGGAAGAGAACGGTTCTATCGTTAACTCAGGTCGCTGGTTACAGTGGCACTGGAAAGGTGCGGACGCCCCGGGGATTGCGCTGACTGACGGCGAGATCCTCTCCGGTATCTTCCTGCGCTTGCGCAAGATGTATGCCGAACAGGGTGGCGCGAACCCGGACCAGGTGCTGAACATGACATGGAACTACGCCATTCCGCATGAGCCATCTTCAGAAGAAGTGGCGATGGAGAGCAACGGTAAGGCGCTGGCCGATATTACCGATCCGGCAACCGGTGCGGTTATCGTCAAGAAAGGCCAACAACTTAGTTCGTTCGCCCAATTGCGCGATGACGGTACAACCTCCTGTGGCTGCTGGATTTTCGCCGGTAGCTGGACGCCGGAAGGCAACCAGATGGCACGCCGTGATAACGCCGATCCGTCTGGCCTCGGTAACACGCTGGGCTGGGCATGGGCATGGCCGCTTAACCGCCGCATTCTGTATAACCGCGCCTCCGCAGATCCGCAGGGTAACCCGTGGGATCCGAAGCGTCAGTTGCTGAAATGGGACGGCACTAAGTGGACCGGCTGGGATATTCCGGACTACAGCGCAGCGCCTCCGGGTAGCGGCGTCGGGCCGTTTATCATGCAGCAGGAAGGCATGGGGCGTCTGTTTGCCCTCGATAAGATGGCGGAAGGTCCGTTCCCGGAACACTACGAGCCGTTTGAAACGCCGCTGGGAACTAACCCGCTGCATCCAAACGTTATCTCGAACCCGGCTGCACGTATCTTTAAAGACGACGCCGAAGCATTGGGTAAAGCCGATAAGTTCCCGTATGTCGGAACCACCTATCGTCTGACCGAGCACTTCCACTACTGGACCAAACACGCGCTGTTGAACGCGATTTTGCAGCCAGAGCAGTTTGTGGAAATCGGGGAGTCGCTGGCGAATAAACTTGGCATTGCCCAGGGCGATACCGTGAAAGTCTCCTCCAACCGTGGCTATATCAAAGCCAAAGCGGTGGTGACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCGATTCACTGGGGCTATGAAGGCGTAGCTAAAAAAGGCTTTATTGCCAATACTTTAACGCCATTCGTTGGTGATGCGAACACGCAGACGCCGGAGTTTAAGTCCTTCCTTGTGAATGTGGAAAAGGTGTAA", 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"MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTRETRNTCTYCSVGCGLLMYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKFPEYRAPGSDKWQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLSTGMLCASASSNETGYLTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWVDIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVADYYAPIRSGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRKYDKSSWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCEYIAETSAHDKTASFLYALGWTQHSVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSMMKAFFGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKEGKVNGYICQGFNPVASFPNKNKVIGCLSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENGSIVNSGRWLQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNYAIPHEPSSEEVAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIFAGSWTPEGNQMARRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQLLKWDGTKWTGWDIPDYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFETPLGTNPLHPNVISNPAARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAILQPEQFVEIGESLANKLGIAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIGIPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV", + "protein_translation_length": 1016, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16131735" + ], + [ + "gene_synonym", + "GeneID:948393" + ], + [ + "gene_synonym", + "ECK3888" + ], + [ + "gene_synonym", + "ASAP:ABE-0012714" + ], + [ + "gene_synonym", + "EcoGene:EG11859" + ], + [ + "gene_synonym", + "JW3866" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32177" + ], + [ + "gene_synonym", + "b3895" + ], + [ + "gene_synonym", + "NP_418331.1" + ], + [ + "gene_synonym", + "fdhD" + ] + ], + "dna_sequence": "GTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCATGTGGTGATGATGGCGTCGCCCAAAGACCTTGAGTACTTTGCGCTCGGTTTTTCGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTGTAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGAGCAACTTAATGACATCGGAAAACCGGTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAACTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGCGCTGGACAAACTGTTAGGCCGCCGGTCACAAGAAGGGGAAAGCTGGCAGCAAGGTGCGGTACTGGTTTCCAGTCGTGCCAGTTATGAAATGGTGCAAAAGTCGGCGATGTGCGGCGTAGAGATTTTGTTTGCGGTGTCTGCCGCGACCACGCTTGCTGTAGAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAA", + "dna_sequence_length": 834, + "functions": [ + "formate dehydrogenase formation protein" + ], + "id": "CDS_3824", + "location": [ + [ + "NC_000913", + 4086016, + "+", + 834 + ] + ], + "md5": "408be9c2bb29844fd02503000c9a2835", + "parent_gene": "", + "protein_md5": "32d6e505ebd2fa165e69c0a2e20b64be", + "protein_translation": "MKKTQRKEIENVTNITGVRQIELWRRDDLQHPRLDEVAEEVPVALVYNGISHVVMMASPKDLEYFALGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSSRRFMGLKERRRALAGRTGCGVCGVEQLNDIGKPVQPLPFTQTFDLNKLDDALRHLNDFQPVGQLTGCTHAAAWMLPSGELVGGHEDVGRHVALDKLLGRRSQEGESWQQGAVLVSSRASYEMVQKSAMCGVEILFAVSAATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLSN", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG11860" + ], + [ + "gene_synonym", + "GI:16131736" + ], + [ + "gene_synonym", + "ECK3889" + ], + [ + "gene_synonym", + "GeneID:948392" + ], + [ + "gene_synonym", + "yiiG" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32151" + ], + [ + "gene_synonym", + "JW3867" + ], + [ + "gene_synonym", + "b3896" + ], + [ + "gene_synonym", + "NP_418332.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0012718" + ] + ], + "dna_sequence": "ATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGTCTGACGGGTTGTGATGATAAAAAAGCCGAAACAGAAACGCTCCCGCCTGCCAATAGTCAACCTGCCGCACCAGCTCCTGAAGCGAAACCTACTGAAGCTCCCGTTGCAAAAGCAGAAGCTAAACCTGAAACACCTGCGCAACCGGTGGTCGATGAACAAGCGGTTTTCGACGAAAAAATGGATGTCTATATCAAGTGCTACAACAAGTTACAGATCCCGGTACAGCGCAGTCTGGCGCGTTATGCTGACTGGCTGAAAGATTTTAAACAGGGGCCTACCGGTGAAGAGCGTACTGTTTATGGCATCTACGGCATTAGTGAATCCAACCTCGCTGAGTGTGAAAAAGGCGTAAAAAGTGCTGTGGCGTTAACGCCTGCGCTGCAACCAATTGATGGCGTGGCGGTGAGTTATATCGATGCTGCCGTGGCGTTGGGTAATACCATTAACGAAATGGATAAATATTACACCCAGGAAAATTATAAAGACGATGCGTTTGCGAAAGGGAAAACGCTGCACCAGACATTCTTAAAAAATCTGGAAGCCTTTGAACCTGTAGCCGAATCTTATCATGCGGCGATTCAGGAAATTAATGATAAGCGTCAGCTTGCGGAACTGAAAAATATTGAAGAAAGAGAAGGGAAAACATTCCACTACTACTCTCTGGCAGTCATGATTTCAGCGAAACAAATTAATAACCTGATATCGCAAGATAAGTTTGATGCAGAAGCGGCAATGAAGAAAGTGTCTGAACTGGAAACGCTAGTGGCGCAGGCCAAAGAAGCGGATAAAGGCGGCATGAATTTCTCGTTTATTAATTCGGCAGGCCAGTATCAACTCGAGGCTAAAAAATACGTTCGCCGCATCAGAGATAAAGTCCCGTACTCTGACTGGGATAAAGAGCAACTTCAGGACGCAAACTCAAGCTGGATGGTCGAAGACTCTTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAA", 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], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32152" + ], + [ + "gene_synonym", + "frvR" + ], + [ + "gene_synonym", + "b3897" + ], + [ + "gene_synonym", + "JW3868" + ], + [ + "gene_synonym", + "ASAP:ABE-0012720" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG11864" + ], + [ + "gene_synonym", + "frvA" + ], + [ + "gene_synonym", + "ECK3893" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32155" + ], + [ + "gene_synonym", + "ASAP:ABE-0012727" + ], + [ + "gene_synonym", + "JW3871" + ], + [ + "gene_synonym", + "b3900" + ], + [ + "gene_synonym", + "GeneID:948391" + ], + [ + "gene_synonym", + "GI:16131740" + ] + ], + "dna_sequence": "ATGGCAGCTCTTACTGCAAGCTGTATTGACCTGAATATTCAGGGCAATGGCGCTTATTCCGTTCTGAAGCAGTTGGCGACAATAGCGTTACAAAACGGTTTTATCACCGACTCACACCAGTTCCTGCAAACCCTGCTGCTGCGCGAAAAAATGCACTCTACTGGATTTGGTTCCGGTGTCGCCGTGCCGCACGGTAAAAGCGCCTGCGTTAAACAACCGTTCGTATTATTCGCCCGCAAAGCGCAGGCTATTGACTGGAAAGCCAGCGATGGCGAAGACGTCAATTGCTGGATCTGCCTCGGCGTGCCGCAAAGCGGCGAAGAGGATCAGGTCAAAATCATCGGCACACTGTGTCGCAAAATTATTCACAAGGAATTTATTCATCAACTGCAACAGGGCGATACCGACCAGGTGCTTGCCTTGTTAAATCAAACCCTCAGCTCATAA", + "dna_sequence_length": 447, + "functions": [ + "putative enzyme IIA component of PTS" + ], + "id": "CDS_3829", + "location": [ + [ + "NC_000913", + 4092823, + "-", + 447 + ] + ], + "md5": "a5e58f8d466cd41e7a80543623bcbab8", + "parent_gene": "", + "protein_md5": "c0e068ab23a6c7d07365f41705a9471c", + "protein_translation": "MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQTLLLREKMHSTGFGSGVAVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICLGVPQSGEEDQVKIIGTLCRKIIHKEFIHQLQQGDTDQVLALLNQTLSS", + "protein_translation_length": 148, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_418337.1" + ], + [ + "gene_synonym", + "EcoGene:EG11865" + ], + [ + "gene_synonym", + "yiiL" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32156" + ], + [ + "gene_synonym", + "ECK3894" + ], + [ + "gene_synonym", + "JW3872" + ], + [ + "gene_synonym", + "b3901" + ], + [ + "gene_synonym", + "rhaM" + ], + [ + "gene_synonym", + "GeneID:948402" + ], + [ + "gene_synonym", + "GI:16131741" + ], + [ + "gene_synonym", + "ASAP:ABE-0012729" + ] + ], + "dna_sequence": "ATGATCCGCAAAGCCTTTGTCATGCAGGTAAACCCCGACGCCCACGAAGAGTATCAGCGTCGGCATAATCCCATCTGGCCAGAACTGGAAGCAGTGCTGAAATCTCACGGTGCGCATAACTACGCCATCTATCTCGACAAAGCGCGTAATCTGCTGTTTGCCATGGTAGAGATTGAATCTGAAGAACGCTGGAATGCGGTTGCCAGCACTGATGTTTGCCAACGTTGGTGGAAATATATGACCGATGTTATGCCCGCTAACCCGGATAACAGCCCGGTGAGTAGCGAGCTGCAAGAAGTGTTTTACCTGCCGTAA", + "dna_sequence_length": 315, + "functions": [ + "L-rhamnose mutarotase" + ], + "id": "CDS_3830", + "location": [ + [ + "NC_000913", + 4093438, + "-", + 315 + ] + ], + "md5": "79e0d4fb3301dc60cb8742003e1545f0", + "parent_gene": "", + "protein_md5": "57a2292d55fc3b2bb2b01c9726349348", + "protein_translation": "MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP", + "protein_translation_length": 104, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_418338.1" + ], + [ + "gene_synonym", + "b3902" + ], + [ + "gene_synonym", + "EcoGene:EG11866" + ], + [ + "gene_synonym", + "ECK3895" + ], + [ + "gene_synonym", + "JW3873" + ], + [ + "gene_synonym", + "rhaD" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32169" + ], + [ + "gene_synonym", + "ASAP:ABE-0012731" + ], + [ + "gene_synonym", + "GeneID:948401" + ], + [ + "gene_synonym", + "GI:16131742" + ] + ], + "dna_sequence": 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"ATGACCACTCAACTGGAACAGGCCTGGGAGCTAGCGAAACAGCGTTTCGCGGCGGTGGGGATTGATGTCGAGGAGGCGCTGCGCCAACTTGATCGTTTACCCGTTTCAATGCACTGCTGGCAGGGCGATGATGTTTCCGGTTTTGAAAACCCGGAAGGTTCGCTGACCGGGGGGATTCAGGCCACAGGCAATTATCCGGGCAAAGCGCGTAATGCCAGTGAGCTACGTGCCGATCTGGAACAGGCTATGCGGCTGATTCCGGGGCCGAAACGGCTTAATTTACATGCCATCTATCTGGAATCAGATACGCCAGTCTCGCGCGACCAGATCAAACCAGAGCACTTCAAAAACTGGGTTGAATGGGCGAAAGCCAATCAGCTCGGTCTGGATTTTAACCCCTCCTGCTTTTCGCATCCGCTAAGCGCCGATGGCTTTACGCTTTCCCATGCCGACGACAGCATTCGCCAGTTCTGGATTGATCACTGCAAAGCCAGCCGTCGCGTTTCGGCCTATTTTGGCGAGCAACTCGGCACACCATCGGTGATGAACATCTGGATCCCGGATGGTATGAAAGATATCACCGTTGACCGTCTCGCCCCGCGTCAGCGTCTGCTGGCAGCACTGGATGAGGTGATCAGCGAGAAGCTAAACCCTGCGCACCATATCGACGCCGTTGAGAGCAAATTGTTTGGCATTGGCGCAGAGAGCTACACGGTTGGCTCCAATGAGTTTTACATGGGGTATGCCACCAGCCGCCAGACTGCGCTGTGCCTGGACGCCGGGCACTTCCACCCGACTGAAGTGATTTCCGACAAGATTTCCGCCGCCATGCTGTATGTGCCGCAGTTGCTGCTGCACGTCAGCCGTCCGGTTCGCTGGGACAGCGATCACGTAGTGCTGCTGGATGATGAAACCCAGGCAATTGCCAGTGAGATTGTGCGTCACGATCTGTTTGACCGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAACGTCACGATACGCCAGCAGGTAGCGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTGAGTCGCCGCGGGTAA", 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"metB" + ], + [ + "gene_synonym", + "ASAP:ABE-0012887" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00935" + ], + [ + "gene_synonym", + "GI:16131777" + ], + [ + "gene_synonym", + "ECK3931" + ], + [ + "gene_synonym", + "NP_418374.1" + ], + [ + "gene_synonym", + "EcoGene:EG10582" + ], + [ + "gene_synonym", + "b3939" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0012906" + ], + [ + "gene_synonym", + "JW5557" + ], + [ + "gene_synonym", + "GI:90111667" + ], + [ + "gene_synonym", + "EcoGene:EG11902" + ], + [ + "gene_synonym", + "NP_418378.4" + ], + [ + "gene_synonym", + "ECK3935" + ] + ], + "dna_sequence": 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], + "id": "CDS_3871", + "location": [ + [ + "NC_000913", + 4136108, + "+", + 906 + ] + ], + "md5": "fa40e60c97dcc23abda3b3429eb0c05a", + "parent_gene": "", + "protein_md5": "ee33b1f96fbb9fc32c120416e947a427", + "protein_translation": "MSAAGKSNPLAISGLVVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRGMRPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVSRKKKEAVSVKRI", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012908" + ], + [ + "gene_synonym", + "b3944" + ], + [ + "gene_synonym", + "yijF" + ], + [ + "gene_synonym", + "JW3916" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32668" + ], + [ + "gene_synonym", + "GeneID:948441" + ], + [ + "gene_synonym", + "EcoGene:EG11903" + ], + [ + "gene_synonym", + "GI:16131782" + ], + [ + "gene_synonym", + "NP_418379.1" + ], + [ + "gene_synonym", + "ECK3936" + ] + ], + "dna_sequence": "ATGAAAGCTTCACTGGCGCTGCTCAGCCTGCTAACGGCATTTACCAGCCACTCCTTAAAATCTCCCGCCGTTCCACCAACCGTGGTACAAATCCAGGCCAATACCAACCTTGCCATCGCAGACGGTGCCAGACAGCAAATTGGCAGCACGCTATTTTACGATCCGGCGTATGTGCAGCTTACTTATCCTGGCGGTGATGTTCCGCAAGAACGCGGTGTATGTTCCGATGTGGTGATCCGCGCATTGCGCAGCCAGAAGGTCGATTTGCAGAAACTGGTTCACGAAGATATGGCGAAGAATTTTGCTGAGTACCCGCAAAAATGGAAGTTAAAGCGCCCGGACAGCAACATCGATCACCGTCGGGTGCCTAATCTGGAAACCTGGTTTAGCCGCCATGATAAAACACGCCCCACCAGCAAGAACCCCAGTGACTATCAAGCGGGCGATATTGTCTCCTGGCGACTGGATAACGGGCTGGCACATATTGGGGTGGTTTCAGATGGCTTCGCCCGCGACGGTACGCCGCTGGTGATACATAACATTGGCGCAGGCGCGCAGGAAGAAGATGTGCTGTTTAACTGGCGGATGGTGGGGCATTATCGTTATTTTGTTAAATAA", + "dna_sequence_length": 618, + "functions": [ + "DUF1287 family protein" + ], + "id": "CDS_3872", + "location": [ + [ + "NC_000913", + 4137657, + "-", + 618 + ] + ], + "md5": "e8c90d973ddc3ec03e828ada3e51ff5c", + "parent_gene": "", + "protein_md5": "6f01c581f6ee902a2694e4d2a8c90988", + "protein_translation": "MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYFVK", + "protein_translation_length": 205, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b3945" + ], + [ + "gene_synonym", + "GI:90111668" + ], + [ + "gene_synonym", + "GeneID:948440" + ], + [ + "gene_synonym", + "EcoGene:EG11904" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9S5" + ], + [ + "gene_synonym", + "gldA" + ], + [ + "gene_synonym", + "JW5556" + ], + [ + "gene_synonym", + "ASAP:ABE-0012912" + ], + [ + "gene_synonym", + "NP_418380.4" + ], + [ + "gene_synonym", + "ECK3937" + ] + ], + "dna_sequence": 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"MELYLDTANVAEVERLARIFPIAGVTTNPSIIAASKESIWEVLPRLQKAIGDEGILFAQTMSRDAQGMVEEAKRLRDAIPGIVVKIPVTSEGLAAIKILKKEGITTLGTAVYSAAQGLLAALAGAKYVAPYVNRVDAQGGDGIRTVQELQTLLEMHAPESMVLAASFKTPRQALDCLLAGCESITLPLDVAQQMLNTPAVESAIEKFEHDWNAAFGTTHL", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "frwA" + ], + [ + "gene_synonym", + "b3947" + ], + [ + "gene_synonym", + "GeneID:948437" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32670" + ], + [ + "gene_synonym", + "yijH" + ], + [ + "gene_synonym", + "JW5555" + ], + [ + "gene_synonym", + "ECK3939" + ], + [ + "gene_synonym", + "ASAP:ABE-0012920" + ], + [ + "gene_synonym", + "EcoGene:EG11906" + ], + [ + "gene_synonym", + "YP_026278.1" + ], + [ + "gene_synonym", + "ptsA" + ], + [ + "gene_synonym", + "GI:49176446" + ] + ], + "dna_sequence": 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"NP_418385.1" + ], + [ + "gene_synonym", + "yijK" + ], + [ + "gene_synonym", + "GI:16131788" + ], + [ + "gene_synonym", + "GeneID:948447" + ], + [ + "gene_synonym", + "EcoGene:EG11909" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69816" + ] + ], + "dna_sequence": "ATGACGAAAATTATTGCAGTAACCGCATGTCCTTCAGGTGTTGCCCATACCTATATGGCAGCAGAGGCGCTGGAAAGTGCCGCGAAAGCGAAAGGCTGGGAAGTGAAAGTAGAAACCCAGGGGTCAATTGGTCTGGAAAATGAACTGACTGCGGAAGATGTGGCGAGCGCTGATATGGTGATTCTGACCAAAGATATCGGCATCAAGTTTGAAGAGCGTTTTGCTGGCAAGACCATCGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAA", + "dna_sequence_length": 321, + "functions": [ + "putative enzyme IIB component of PTS" + ], + "id": "CDS_3877", + "location": [ + [ + "NC_000913", + 4143624, + "+", + 321 + ] + ], + "md5": "e135f90076320ca49cdf10723d6da074", + "parent_gene": "", + "protein_md5": "41c745e1144737d3a54930399d749fd8", + "protein_translation": "MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA", + "protein_translation_length": 106, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b3951" + ], + [ + "gene_synonym", + "ECK3942" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32674" + ], + [ + "gene_synonym", + "NP_418386.1" + ], + [ + "gene_synonym", + "JW3923" + ], + [ + "gene_synonym", + "pflD" + ], + [ + "gene_synonym", + "yijL" + ], + [ + "gene_synonym", + "ASAP:ABE-0012934" + ], + [ + "gene_synonym", + "GI:16131789" + ], + [ + "gene_synonym", + "EcoGene:EG11910" + ], + [ + "gene_synonym", + "GeneID:948454" + ] + ], + "dna_sequence": 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"MTNRISRLKTALFANTREISLERALLYTASHRQTEGEPVILRRAKATAYILEHVEISIRDEELIAGNRTVKPRAGIMSPEMDPYWLLKELDQFPTRPQDRFAISEEDKRIYREELFPYWEKRSMKDFINGQMTDEVKAATNTQIFSINQTDKGQGHIIIDYPRLLNHGLGELVAQMQQHCQQQPENHFYQAALLLLEASQKHILRYAELAETMAANCTDAQRREELLTIAEISRHNAQHKPQTFWQACQLFWYMNIILQYESNASSLSLGRFDQYMLPFYQTSLTQGEDAAFLKELLESLWVKCNDIVLLRSTSSARYFAGFPTGYTALLGGLTENGRSAVNVLSFLCLDAYQSVQLPQPNLGVRTNALIDTPFLMKTAETIRFGTGIPQIFNDEVVVPAFLNRGVSLEDARDYSVVGCVELSIPGRTYGLHDIAMFNLLKVMEICLHENEGNAALTYEGLLEQIRAKISHYITLMVEGSNICDIGHRDWAPVPLLSSFISDCLEKGRDITDGGARYNFSGVQGIGIANLSDSLHALKGMVFEQQRLSFDELLSVLKANFATPEGEKVRARLINRFEKYGNDIDEVDNISAELLRHYCKEVEKYQNPRGGYFTPGSYTVSAHVPLGSVVGATPDGRFAGEQLADGGLSPMLGQDAQGPTAVLKSVSKLDNTLLSNGTLLNVKFTPATLEGEAGLRKLADFLRAFTQLKLQHIQFNVVNADTLREAQQRPQDYAGLVVRVAGYSAFFVELSKEIQDDIIRRTAHQL", + "protein_translation_length": 765, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW3924" + ], + [ + "gene_synonym", + "b3952" + ], + [ + "gene_synonym", + "ECK3943" + ], + [ + "gene_synonym", + "GeneID:948453" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32675" + ], + [ + "gene_synonym", + "ASAP:ABE-0012937" + ], + [ + "gene_synonym", + "pflC" + ], + [ + "gene_synonym", + "yijM" + ], + [ + "gene_synonym", + "EcoGene:EG11911" + ], + [ + "gene_synonym", + "NP_418387.3" + ], + [ + "gene_synonym", + "GI:49176447" + ] + ], + "dna_sequence": "ATGACATCATCCGCCGGACAGCGCATCAGCTGTAACGTTGTGGAAACGCGCCGCGATGATGTGGCGCGCATTTTCAACATTCAGCGTTATTCACTGAATGACGGCGAGGGCATTCGTACGGTGGTCTTTTTTAAAGGCTGTCCGCATCTTTGCCCGTGGTGTGCTAATCCGGAGTCGATCTCCGGCAAAATCCAGACGGTACGCAGAGAGGCGAAATGTCTGCACTGTGCGAAATGTTTGCGTGATGCGGATGAATGCCCCTCCGGGGCGTTTGAACGGATTGGTCGCGATATCAGCCTTGACGCTCTGGAACGGGAAGTGATGAAAGATGACATTTTCTTTCGCACGTCCGGCGGCGGCGTCACGCTTTCTGGCGGCGAAGTGTTAATGCAGGCGGAGTTTGCTACCCGTTTTTTACAGCGACTGCGGCTGTGGGGTGTGTCATGCGCCATTGAAACTGCCGGAGACGCACCAGCCAGCAAGCTATTACCGCTGGCGAAATTGTGCGATGAAGTGTTGTTCGATTTAAAAATTATGGACGCGACTCAGGCGCGGGATGTGGTGAAGATGAACCTGCCACGCGTGCTGGAGAATCTGCGTTTGCTGGTGAGTGAGGGCGTCAACGTGATCCCGCGTTTACCGCTGATCCCTGGTTTCACGCTCAGCCGGGAGAATATGCAGCAGGCGCTGGATGTACTGATCCCGCTGAATATCAGGCAGATCCATCTGTTACCGTTTCATCAGTACGGCGAACCGAAATACCGCCTGCTGGGGAAAACATGGTCGATGAAAGAGGTGCCTGCGCCGTCGTCAGCTGATGTGGCAACGATGCGCGAAATGGCAGAACGGGCCGGACTTCAGGTTACCGTGGGAGGTTAA", + "dna_sequence_length": 879, + "functions": [ + "putative [formate-C-acetyltransferase 2]-activating enzyme", + "pyruvate formate-lyase 1-activating enzyme" + ], + "id": "CDS_3879", + "location": [ + [ + "NC_000913", + 4146258, + "+", + 879 + ] + ], + "md5": "212d4afa2ff74a422740c697917871d3", + "parent_gene": "", + "protein_md5": "0b40b05e678b3c68befc1c668fde691b", + "protein_translation": "MTSSAGQRISCNVVETRRDDVARIFNIQRYSLNDGEGIRTVVFFKGCPHLCPWCANPESISGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDALEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPGFTLSRENMQQALDVLIPLNIRQIHLLPFHQYGEPKYRLLGKTWSMKEVPAPSSADVATMREMAERAGLQVTVGG", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW3925" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32676" + ], + [ + "gene_synonym", + "b3953" + ], + [ + "gene_synonym", + "ECK3944" + ], + [ + "gene_synonym", + "frwD" + ], + [ + "gene_synonym", + "GeneID:948452" + ], + [ + "gene_synonym", + "NP_418388.1" + ], + [ + "gene_synonym", + "yijN" + ], + [ + "gene_synonym", + "EcoGene:EG11912" + ], + [ + "gene_synonym", + "GI:16131791" + ], + [ + "gene_synonym", + "ASAP:ABE-0012941" + ] + ], + "dna_sequence": "ATGGCATACCTGGTGGCAGTAACCGCCTGCGTAAGCGGCGTGGCGCATACTTATATGGCGGCGGAACGGCTGGAAAAGTTGTGCCTGTTAGAGAAGTGGGGAGTCAGCATTGAAACTCAGGGCGCGCTGGGAACGGAGAATCGTTTAGCGGATGAGGATATCCGCCGGGCGGATGTTGCTCTGTTGATTACGGATATCGAGCTTGCCGGTGCCGAGCGATTTGAACATTGCCGCTATGTGCAATGCAGCATCTACGCATTCCTGCGTGAGCCGCAGCGGGTAATGAGCGCGGTGCGCAAAGTGCTTTCTGCGCCGCAGCAAACCCATCTTATTCTGGAGTAG", + "dna_sequence_length": 342, + "functions": [ + "putative enzyme IIB component of PTS" + ], + "id": "CDS_3880", + "location": [ + [ + "NC_000913", + 4147138, + "+", + 342 + ] + ], + "md5": "bb45b84d8e4bfe08f2581bd507a9dcfa", + "parent_gene": "", + "protein_md5": "fe5507fb382a0fab75c7421b41d25e0e", + "protein_translation": "MAYLVAVTACVSGVAHTYMAAERLEKLCLLEKWGVSIETQGALGTENRLADEDIRRADVALLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVLSAPQQTHLILE", + "protein_translation_length": 113, + "type": "CDS" + }, 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"ATGTATCACGACGTCAGCTATCTGCTCTCCCGCCTGATCAACGGCCCGCTGTCCCTGCGCCAGATTTACTTTGCCAGCAGTAACGGCCCGGTGCCCGATCTTGCGTATCAGGTCGATTTTCCACGGCTGGAAATTGTGCTGGAAGGTGAGTTTGTTGATACCGGCGCTGGAGCAACGTTAGTTCCCGGCGATGTGCTGTACGTTCCTGCTGGTGGCTGGAATTTTCCACAATGGCAAGCCCCCGCTACTACCTTTAGCGTGCTGTTTGGCAAACAGCAACTCGGCTTCAGCGTCGTGCAATGGGATGGCAAACAATATCAAAATCTGGCGAAGCAACACGTCGCCCGACGCGGCCCACGCATAGGTTCTTTTCTGCTACAAACGCTCAATGAAATGCAAATGCAGCCGCAGGAGCAGCAAACGGCAAGGCTTATCGTCGCCAGCCTGCTTAGCCACTGCCGCGATTTGCTTGGCAGCCAAATCCAGACCGCCTCACGCAGCCAGGCACTATTTGAAGCTATTCGCGATTATATCGACGAACGCTATGCCTCCGCGCTTACCCGCGAATCTGTTGCACAGGCGTTTTATATTTCGCCAAATTACCTCTCGCACCTGTTTCAAAAAACGGGGGCCATTGGTTTTAACGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGACCTGAAGGTAAAAGAAGTGGCGCACGCCTGCGGCTTTGTCGACAGCAACTACTTCTGCCGTCTGTTTCGTAAAAACACCGAACGCTCGCCGTCGGAATATCGCCGGCAGTACCACAGCCAACTGACAGAAAAACCGACTACTCCAGAATAA", + "dna_sequence_length": 852, + "functions": [ + "AraC family putative transcriptional activator" + ], + "id": "CDS_3881", + "location": [ + [ + "NC_000913", + 4148317, + "-", + 852 + ] + ], + "md5": "46cf5ca659f102e675ab4bb88607b513", + "parent_gene": "", + "protein_md5": "72dc4284e0ec27f04b1861d61bb5e339", + "protein_translation": "MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE", + "protein_translation_length": 283, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW3927" + ], + [ + "gene_synonym", + "GeneID:948458" + ], + [ + "gene_synonym", + "NP_418390.1" + ], + [ + "gene_synonym", + "b3955" + ], + [ + "gene_synonym", + "ECK3946" + ], + [ + "gene_synonym", + "EcoGene:EG11914" + ], + [ + "gene_synonym", + "yijP" + ], + [ + "gene_synonym", + "GI:16131793" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CB39" + ], + [ + "gene_synonym", + "cptA" + ], + [ + "gene_synonym", + 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"gene_synonym", + "ppc" + ], + [ + "gene_synonym", + "NP_418391.1" + ], + [ + "gene_synonym", + "asp" + ], + [ + "gene_synonym", + "b3956" + ], + [ + "gene_synonym", + "ECK3947" + ], + [ + "gene_synonym", + "GeneID:948457" + ], + [ + "gene_synonym", + "JW3928" + ], + [ + "gene_synonym", + "EcoGene:EG10756" + ], + [ + "gene_synonym", + "ASAP:ABE-0012950" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00864" + ], + [ + "gene_synonym", + "glu" + ], + [ + "gene_synonym", + "GI:16131794" + ] + ], + "dna_sequence": 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"gene_synonym", + "Arg2" + ], + [ + "gene_synonym", + "GeneID:948455" + ], + [ + "gene_synonym", + "argH" + ], + [ + "gene_synonym", + "NP_418393.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11446" + ], + [ + "gene_synonym", + "argC" + ], + [ + "gene_synonym", + "GI:16131796" + ] + ], + "dna_sequence": 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"ASAP:ABE-0012967" + ], + [ + "gene_synonym", + "GI:145698337" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6C8" + ], + [ + "gene_synonym", + "NP_418394.3" + ], + [ + "gene_synonym", + "argB" + ] + ], + "dna_sequence": 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"parent_gene": "", + "protein_md5": "c286455726fee736ab7098a9f1cab5aa", + "protein_translation": "MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA", + "protein_translation_length": 258, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG11223" + ], + [ + "gene_synonym", + "ECK3951" + ], + [ + "gene_synonym", + "JW3932" + ], + [ + "gene_synonym", + "NP_418395.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11447" + ], + [ + "gene_synonym", + "GeneID:948463" + ], + [ + "gene_synonym", + "argH" + ], + [ + "gene_synonym", + "GI:16131798" + ], + [ + "gene_synonym", + "b3960" + ], + [ + "gene_synonym", + "ASAP:ABE-0012969" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW3933" + ], + [ + "gene_synonym", + "EcoGene:EG10681" + ], + [ + "gene_synonym", + "mor" + ], + [ + "gene_synonym", + "NP_418396.1" + ], + [ + "gene_synonym", + "GeneID:948462" + ], + [ + "gene_synonym", + "GI:16131799" + ], + [ + "gene_synonym", + "ASAP:ABE-0012973" + ], + [ + "gene_synonym", + "momR" + ], + [ + "gene_synonym", + "b3961" + ] + ], + "dna_sequence": 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"MGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGIAPTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGNNPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVTIVFSAGAEALDVGVEQRRQLEERLVLQLRMISKGAYYWYRREQEKTAIIPGNVKDE", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW3936" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF40" + ], + [ + "gene_synonym", + "GeneID:948459" + ], + [ + "gene_synonym", + "yijD" + ], + [ + "gene_synonym", + "ECK3956" + ], + [ + "gene_synonym", + "GI:16131802" + ], + [ + "gene_synonym", + "EcoGene:EG11395" + ], + [ + "gene_synonym", + "ASAP:ABE-0012981" + ], + [ + "gene_synonym", + "NP_418399.1" + ], + [ + "gene_synonym", + "b3964" + ] + ], + "dna_sequence": 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"ATGACCCCCGAACACCTTCCAACAGAACAGTATGAAGCGCAGTTAGCCGAAAAAGTGGTACGTTTGCAAAGTATGATGGCACCGTTTTCTGACCTGGTTCCGGAAGTGTTTCGCTCGCCGGTCAGTCATTACCGGATGCGCGCGGAGTTCCGCATCTGGCACGATGGCGATGACCTGTATCACATCATTTTCGATCAACAAACCAAAAGCCGCATCCGCGTGGATAGCTTCCCCGCCGCCAGTGAACTTATCAACCAGTTGATGACGGCGATGATTGCGGGTGTGCGTAATAATCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCGGAGGCCCTGCGCGATGCACTGCGCGCGCAGAATCTGAATGTGCATCTGATTGGTCGGGCAACGAAAACCAAAATCGAGCTGGATCAGGATTACATCGATGAACGTCTGCCGGTCGCAGGGAAAGAGATGATCTACCGTCAGGTAGAAAACAGCTTTACCCAGCCGAACGCGGCGATGAATATTCAGATGCTGGAATGGGCGCTGGACGTAACCAAAGGCTCAAAAGGCGATTTACTGGAGCTGTACTGCGGCAACGGTAACTTTTCATTAGCGCTGGCGCGTAATTTTGATCGGGTATTAGCCACCGAAATCGCTAAGCCGTCGGTTGCTGCTGCGCAATACAACATCGCAGCTAACCATATTGATAACGTACAAATTATTCGTATGGCGGCAGAAGAATTTACTCAGGCGATGAATGGTGTGCGCGAGTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTATCCGCGTATTTTGTACATCTCCTGTAACCCGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGCTCTGTTTGATCAGTTCCCCTACACGCACCATATGGAGTGCGGCGTATTACTGACCGCGAAGTAA", 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"gene_synonym", + "ECK3958" + ], + [ + "gene_synonym", + "JW3938" + ], + [ + "gene_synonym", + "btuB" + ], + [ + "gene_synonym", + "ASAP:ABE-0012987" + ], + [ + "gene_synonym", + "GI:16131804" + ], + [ + "gene_synonym", + "cer" + ], + [ + "gene_synonym", + "dcrC" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06129" + ], + [ + "gene_synonym", + "b3966" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P30137" + ], + [ + "gene_synonym", + "thiA" + ], + [ + "gene_synonym", + "JW3957" + ] + ], + "dna_sequence": "ATGTATCAGCCTGATTTTCCTCCTGTACCTTTTCGTTCAGGACTGTACCCGGTGGTGGACAGCGTACAGTGGATCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGGCGTCCATTTGGGGCAGGAAGATTTGCAAGCCACCGATCTCAATGCCATCCGCGCGGCAGGCCTGCGGCTGGGCGTTTCGACACATGACGATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTATATCGCGCTGGGACATGTGTTCCCGACGCAAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCGGATTATCCCACCGTGGCGATTGGCGGTATCAGTCTGGCACGCGCGCCTGCGGTGATAGCAACGGGTGTCGGCAGTATCGCCGTCGTCAGCGCCATTACTCAAGCCGCAGACTGGCGTTTGGCAACGGCACAGTTGCTGGAAATTGCAGGAGTTGGCGATGAATGA", + "dna_sequence_length": 636, + "functions": [ + "thiamine phosphate synthase (thiamine phosphate pyrophosphorylase)" + ], + "id": "CDS_3912", + "location": [ + [ + "NC_000913", + 4194204, + "-", + 636 + ] + ], + "md5": 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"yjaG" + ] + ], + "dna_sequence": "ATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATGGCTTGCTTATGCGAACGCATGTACCCCAATTACGCCATGTTCTGCCAGCAAACCGGTTTTGGTGATGGGCAAATTTACCGTCGCATTCTCGATCTCATCTGGGAAACGCTGACCGTTAAAGACGCAAAAGTAAATTTCGACAGCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCAGCCGACGATTTCGATCTGTACGGCGTTTATCCGGCAATCGATGCCTGCGTGGCGTTAAGTGAACTGGTCCATTCGCGTTTGAGTGGTGAAACGCTCGAACACGCGGTGGAAGTGAGTAAGACCTCCATCACGACCGTTGCGATGCTGGAAATGACTCAGGCTGGTCGCGAAATGAGCGATGAAGAGCTTAAAGAAAACCCAGCTGTAGAGCAAGAATGGGACATTCAGTGGGAAATATTCCGACTTTTAGCTGAGTGCGAAGAACGCGATATCGAGCTGATAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAA", + "dna_sequence_length": 591, + "functions": [ + "DUF416 domain protein" + ], + "id": "CDS_3918", + "location": [ + [ + "NC_000913", + 4199504, + "+", + 591 + ] + ], + "md5": "195aff0fd0c04244c0aac8a72160209b", + "parent_gene": "", + "protein_md5": "9f04afa78cf67b2eff76743038ca0735", + "protein_translation": 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"NP_418429.1" + ], + [ + "gene_synonym", + "JW3965" + ], + [ + "gene_synonym", + "EcoGene:EG11917" + ], + [ + "gene_synonym", + "GI:16131831" + ], + [ + "gene_synonym", + "b4001" + ], + [ + "gene_synonym", + "ASAP:ABE-0013079" + ] + ], + "dna_sequence": "GTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGATGCTGGCTGGCGCTCTGCTTCTCACTGCCTGTAGTCATAACTCTTCACTTCCTCCCTTTACCGCCAGTGGATTTGCTGAAGACCAGGGCGCGGTACGCATCTGGCGAAAAGACAGCGGCGATAATGTGCATCTGCTTGCCGTGTTTAGCCCGTGGCGCAGTGGCGATACCACGACGCGAGAGTATCGCTGGCAGGGCGATAACCTCACGCTCATCAATATCAATGTTTACAGCAAACCGCCGGTGAATATTCGCGCGCGTTTTGACGATCGCGGTGATCTGAGCTTTATGCAACGTGAATCCGATGGGGAAAAGCAGCAGCTTTCTAACGACCAAATCGATTTATACCGTTATCGTGCTGATCAGATCCGCCAGATTAGCGATGCCTTACGTCAGGGGAGAGTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGA", + "dna_sequence_length": 696, + "functions": [ 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"zra" + ], + [ + "gene_synonym", + "ASAP:ABE-0013081" + ], + [ + "gene_synonym", + "JW5546" + ] + ], + "dna_sequence": "ATGAAACGGAACACGAAAATTGCCCTGGTAATGATGGCGCTTTCAGCAATGGCGATGGGATCGACATCTGCATTTGCTCACGGCGGACACGGTATGTGGCAGCAAAATGCCGCGCCTTTGACCAGCGAACAACAGACAGCGTGGCAGAAAATCCATAATGACTTTTACGCTCAAAGCAGCGCACTGCAACAGCAACTGGTGACGAAGCGTTATGAATACAATGCCCTGTTAGCCGCGAACCCACCGGATAGCAGCAAAATTAACGCGGTCGCCAAAGAGATGGAGAATTTGCGTCAGTCGTTAGATGAGTTACGGGTGAAACGAGATATCGCGATGGCTGAAGCGGGTATTCCGCGCGGAGCCGGAATGGGCATGGGCTACGGCGGCTGCGGTGGTGGCGGTCATATGGGTATGGGCCACTGGTAA", + "dna_sequence_length": 426, + "functions": [ + "Zn-dependent periplasmic chaperone" + ], + "id": "CDS_3921", + "location": [ + [ + "NC_000913", + 4201688, + "-", + 426 + ] + ], + "md5": "930d1e4c614292499569cd4f1af51da9", + "parent_gene": "", + "protein_md5": "f98a58f47a72c930b718f4f929f7f8fa", + "protein_translation": 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"gene_synonym", + "EcoGene:EG10482" + ], + [ + "gene_synonym", + "JW3968" + ], + [ + "gene_synonym", + "zraR" + ], + [ + "gene_synonym", + "GI:16131834" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14375" + ], + [ + "gene_synonym", + "hydG" + ], + [ + "gene_synonym", + "b4004" + ], + [ + "gene_synonym", + "ASAP:ABE-0013093" + ], + [ + "gene_synonym", + "NP_418432.1" + ] + ], + "dna_sequence": 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"ATGCAACAACGTCGTCCAGTCCGCCGCGCTCTGCTCAGTGTTTCTGACAAAGCCGGTATCGTCGAATTCGCCCAGGCACTTTCCGCACGCGGTGTGGAGCTGCTGTCTACAGGGGGCACTGCCCGTCTGTTAGCAGAAAAAGGTCTGCCGGTAACCGAAGTTTCCGATTACACCGGTTTCCCGGAGATGATGGATGGACGCGTGAAGACCCTGCATCCGAAAGTACATGGTGGCATTCTGGGCCGTCGCGGCCAGGACGATGCCATTATGGAAGAACATCAGATCCAGCCTATCGATATGGTGGTTGTTAACCTGTATCCGTTCGCCCAGACCGTGGCCCGTGAAGGTTGCTCGCTGGAAGATGCGGTTGAGAACATCGATATCGGCGGCCCAACGATGGTGCGCTCCGCCGCCAAGAACCATAAAGATGTCGCAATCGTGGTGAAGAGCAGCGACTATGACGCCATTATTAAAGAGATGGATGACAACGAAGGATCGCTGACGCTTGCAACCCGTTTCGACCTCGCCATCAAAGCCTTCGAACACACTGCCGCCTACGACAGCATGATTGCCAACTACTTCGGCAGCATGGTTCCGGCTTACCACGGTGAAAGCAAAGAAGCCGCCGGTCGCTTCCCACGCACGCTGAACCTGAACTTCATTAAGAAGCTGGATATGCGTTACGGCGAGAACAGCCACCAGCAGGCTGCCTTCTATATAGAAGAGAATGTGAAAGAAGCCTCCGTTGCTACCGCAACCCAGGTTCAGGGTAAAGCCCTCTCTTATAACAACATCGCCGATACCGATGCGGCGCTGGAGTGCGTGAAAGAGTTCGCCGAGCCGGCATGTGTGATTGTGAAGCACGCCAACCCTTGCGGCGTGGCTATCGGCAATTCCATTCTTGATGCTTACGATCGCGCGTACAAAACCGACCCAACCTCCGCATTCGGCGGCATCATTGCCTTTAACCGCGAGCTGGATGCGGAAACCGCACAGGCCATCATTTCTCGTCAGTTTGTCGAAGTGATTATTGCGCCGTCCGCCAGCGAAGAAGCCCTGAAAATCACCGCCGCCAAACAGAACGTACGCGTTCTGACCTGCGGTCAGTGGGGCGAGCGTGTTCCGGGCCTCGATTTCAAACGCGTGAACGGCGGTCTGCTGGTTCAGGATCGTGACCTGGGGATGGTCGGTGCGGAAGAACTGCGCGTGGTGACCAAACGTCAGCCGAGCGAACAGGAACTGCGTGATGCGCTGTTCTGCTGGAAGGTGGCGAAGTTTGTGAAATCCAACGCTATCGTCTATGCCAAAAACAATATGACTATCGGCATTGGCGCGGGCCAGATGAGCCGCGTGTACTCCGCAAAAATCGCCGGTATTAAAGCGGCCGATGAAGGCCTGGAAGTGAAAGGTTCCTCGATGGCTTCTGACGCGTTCTTCCCGTTCCGCGACGGTATTGATGCCGCCGCCGCTGCGGGCGTGACCTGCGTAATCCAGCCTGGCGGTTCTATCCGTGATGACGAAGTGATTGCCGCCGCCGACGAGCACGGTATTGCGATGCTCTTCACCGACATGCGCCACTTCCGCCATTAA", 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"gene_synonym", + "yjaA" + ], + [ + "gene_synonym", + "EcoGene:EG11206" + ], + [ + "gene_synonym", + "GI:16131837" + ], + [ + "gene_synonym", + "JW3971" + ], + [ + "gene_synonym", + "NP_418435.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09162" + ], + [ + "gene_synonym", + "ECK4003" + ], + [ + "gene_synonym", + "ASAP:ABE-0013112" + ], + [ + "gene_synonym", + "GeneID:948515" + ], + [ + "gene_synonym", + "b4011" + ] + ], + "dna_sequence": "ATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGTTAATCGCCAATTTCTTTGTTGCAGAAAAAGTTCTGCAAGATCTTGTTCTGCAACTCCACCCACGTTCAACCTGGCATTCTTTTTTGCCAGCAAAACGTATGGATATTGTTGTGAGCGCACTGGAAATGAATGAGGGCGGTTTGTCACAGGTTGAGGAACGCATTCTCCATGAAGTGGTCGCTGGGGCAACGTTAATGAAATATCGCCAGTTCCACATCCATGCGCAATCAGCGGTACTCAGTGATAGTGCGGTCATGGCAATGCTTAAGCAGAAATAA", + "dna_sequence_length": 384, + "functions": [ + "stress-induced protein" + ], + "id": "CDS_3926", + "location": [ + [ + "NC_000913", + 4213234, + "+", + 384 + ] 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"ATGGTTATTAGTATTCGCCGCTCACGGCATGAGGAAGGGGAGGAACTCGTTGCGATTTGGTGTCGTTCTGTCGATGCCACTCACGATTTTCTATCAGCAGAGTATCGGACCGAGCTGGAGGACCTAGTTCGTTCCTTCCTGCCGGAAGCGCCGTTGTGGGTCGCGGTTAATGAGCGGGATCAGCCGGTTGGATTTATGTTGCTAAGTGGGCAGCATATGGATGCGCTGTTTATCGATCCTGATGTGCGCGGCTGCGGCGTAGGTCGGGTGCTGGTGGAGCATGCGCTCTCGATGGCACCGGAACTGACAACCAACGTTAATGAGCAAAATGAGCAGGCGGTTGGGTTCTATAAGAAGGTGGGTTTTAAGGTTACGGGACGCTCTGAGGTGGACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGCGTAG", + "dna_sequence_length": 444, + "functions": [ + "GNAT-family putative N-acetyltransferase", + "acetyl coenzyme A-binding protein" + ], + "id": "CDS_3927", + "location": [ + [ + "NC_000913", + 4214123, + "-", + 444 + ] + ], + "md5": "4a23fb435dc80674cf6e00bae46e3091", + "parent_gene": "", + "protein_md5": "e82b1aa1f92f0bd46703b0ee99655019", + "protein_translation": "MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRTELEDLVRSFLPEAPLWVAVNERDQPVGFMLLSGQHMDALFIDPDVRGCGVGRVLVEHALSMAPELTTNVNEQNEQAVGFYKKVGFKVTGRSEVDDLGKPYPLLNLAYVGA", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:948513" + ], + [ + "gene_synonym", + "GI:16131839" + ], + [ + "gene_synonym", + "JW3973" + ], + [ + "gene_synonym", + "ECK4005" + ], + [ + "gene_synonym", + "metA" + ], + [ + "gene_synonym", + "ASAP:ABE-0013121" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07623" + ], + [ + "gene_synonym", + "EcoGene:EG10581" + ], + [ + "gene_synonym", + "NP_418437.1" + ], + [ + "gene_synonym", + "b4013" + ] + ], + "dna_sequence": 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O-transsuccinylase" + ], + "id": "CDS_3928", + "location": [ + [ + "NC_000913", + 4214280, + "+", + 930 + ] + ], + "md5": "8a5b049d22b362cfacfa25fc27cfce48", + "parent_gene": "", + "protein_md5": "3d96cb1101bbc5af060f8eea8e42733a", + "protein_translation": "MPIRVPDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLMPKKIETENQFLRLLSNSPLQVDIQLLRIDSRESRNTPAEHLNNFYCNFEDIQDQNFDGLIVTGAPLGLVEFNDVAYWPQIKQVLEWSKDHVTSTLFVCWAVQAALNILYGIPKQTRTEKLSGVYEHHILHPHALLTRGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGDAYLFASKDKRIAFVTGHPEYDAQTLAQEFFRDVEAGLDPDVPYNYFPHNDPQNTPRASWRSHGNLLFTNWLNYYVYQITPYDLRHMNPTLD", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:948512" + ], + [ + "gene_synonym", + "mas" + ], + [ + "gene_synonym", + "EcoGene:EG10023" + ], + [ + "gene_synonym", + "aceB" + ], + [ + "gene_synonym", + "ASAP:ABE-0013125" + ], + [ + "gene_synonym", + "JW3974" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08997" + ], + [ + "gene_synonym", + "ECK4006" + ], + [ + "gene_synonym", + "NP_418438.1" + ], + [ + "gene_synonym", + "b4014" + ], + [ + "gene_synonym", + "GI:16131840" + ] + ], + "dna_sequence": "ATGACTGAACAGGCAACAACAACCGATGAACTGGCTTTCACAAGGCCGTATGGCGAGCAGGAGAAGCAAATTCTTACTGCCGAAGCGGTAGAATTTCTGACTGAGCTGGTGACGCATTTTACGCCACAACGCAATAAACTTCTGGCAGCGCGCATTCAGCAGCAGCAAGATATTGATAACGGAACGTTGCCTGATTTTATTTCGGAAACAGCTTCCATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGATGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGACGGGCAAATTAACCTGCGTGATGCGGTTAACGGCACCATCAGTTACACCAATGAAGCAGGCAAAATTTACCAGCTCAAGCCCAATCCAGCGGTTTTGATTTGTCGGGTACGCGGTCTGCACTTGCCGGAAAAACATGTCACCTGGCGTGGTGAGGCAATCCCCGGCAGCCTGTTTGATTTTGCGCTCTATTTCTTCCACAACTATCAGGCACTGTTGGCAAAGGGCAGTGGTCCCTATTTCTATCTGCCGAAAACCCAGTCCTGGCAGGAAGCGGCCTGGTGGAGCGAAGTCTTCAGCTATGCAGAAGATCGCTTTAATCTGCCGCGCGGCACCATCAAGGCGACGTTGCTGATTGAAACGCTGCCCGCCGTGTTCCAGATGGATGAAATCCTTCACGCGCTGCGTGACCATATTGTTGGTCTGAACTGCGGTCGTTGGGATTACATCTTCAGCTATATCAAAACGTTGAAAAACTATCCCGATCGCGTCCTGCCAGACAGACAGGCAGTGACGATGGATAAACCATTCCTGAATGCTTACTCACGCCTGTTGATTAAAACCTGCCATAAACGCGGTGCTTTTGCGATGGGCGGCATGGCGGCGTTTATTCCGAGCAAAGATGAAGAGCACAATAACCAGGTGCTCAACAAAGTAAAAGCGGATAAATCGCTGGAAGCCAATAACGGTCACGATGGCACATGGATCGCTCACCCAGGCCTTGCGGACACGGCAATGGCGGTATTCAACGACATTCTCGGCTCCCGTAAAAATCAGCTTGAAGTGATGCGCGAACAAGACGCGCCGATTACTGCCGATCAGCTGCTGGCACCTTGTGATGGTGAACGCACCGAAGAAGGTATGCGCGCCAACATTCGCGTGGCTGTGCAGTACATCGAAGCGTGGATCTCTGGCAACGGCTGTGTGCCGATTTATGGCCTGATGGAAGATGCGGCGACGGCTGAAATTTCCCGTACCTCGATCTGGCAGTGGATCCATCATCAAAAAACGTTGAGCAATGGCAAACCGGTGACCAAAGCCTTGTTCCGCCAGATGCTGGGCGAAGAGATGAAAGTCATTGCCAGCGAACTGGGCGAAGAACGTTTCTCCCAGGGGCGTTTTGACGATGCCGCACGCTTGATGGAACAGATCACCACTTCCGATGAGTTAATTGATTTCCTGACCCTGCCAGGCTACCGCCTGTTAGCGTAA", 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], + [ + "gene_synonym", + "NP_418439.1" + ], + [ + "gene_synonym", + "aceA" + ], + [ + "gene_synonym", + "JW3975" + ], + [ + "gene_synonym", + "EcoGene:EG10022" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9G6" + ], + [ + "gene_synonym", + "ECK4007" + ], + [ + "gene_synonym", + "b4015" + ], + [ + "gene_synonym", + "GI:16131841" + ], + [ + "gene_synonym", + "ASAP:ABE-0013128" + ] + ], + "dna_sequence": "ATGAAAACCCGTACACAACAAATTGAAGAATTACAGAAAGAGTGGACTCAACCGCGTTGGGAAGGCATTACTCGCCCATACAGTGCGGAAGATGTGGTGAAATTACGCGGTTCAGTCAATCCTGAATGCACGCTGGCGCAACTGGGCGCAGCGAAAATGTGGCGTCTGCTGCACGGTGAGTCGAAAAAAGGCTACATCAACAGCCTCGGCGCACTGACTGGCGGTCAGGCGCTGCAACAGGCGAAAGCGGGTATTGAAGCAGTCTATCTGTCGGGATGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGAGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTCCTGCCGATCGTTGCCGATGCGGAAGCCGGTTTTGGCGGTGTCCTGAATGCCTTTGAACTGATGAAAGCGATGATTGAAGCCGGTGCAGCGGCAGTTCACTTCGAAGATCAGCTGGCGTCAGTGAAGAAATGCGGTCACATGGGCGGCAAAGTTTTAGTGCCAACTCAGGAAGCTATTCAGAAACTGGTCGCGGCGCGTCTGGCAGCTGACGTGACGGGCGTTCCAACCCTGCTGGTTGCCCGTACCGATGCTGATGCGGCGGATCTGATCACCTCCGATTGCGACCCGTATGACAGCGAATTTATTACCGGCGAGCGTACCAGTGAAGGCTTCTTCCGTACTCATGCGGGCATTGAGCAAGCGATCAGCCGTGGCCTGGCGTATGCGCCATATGCTGACCTGGTCTGGTGTGAAACCTCCACGCCGGATCTGGAACTGGCGCGTCGCTTTGCACAAGCTATCCACGCGAAATATCCGGGCAAACTGCTGGCTTATAACTGCTCGCCGTCGTTCAACTGGCAGAAAAACCTCGACGACAAAACTATTGCCAGCTTCCAGCAGCAGCTGTCGGATATGGGCTACAAGTTCCAGTTCATCACCCTGGCAGGTATCCACAGCATGTGGTTCAACATGTTTGACCTGGCAAACGCCTATGCCCAGGGCGAGGGTATGAAGCACTACGTTGAGAAAGTGCAGCAGCCGGAATTTGCCGCCGCGAAAGATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGTCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAA", 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"gene_synonym", + "UniProtKB/Swiss-Prot:P11071" + ], + [ + "gene_synonym", + "EcoGene:EG10026" + ], + [ + "gene_synonym", + "ASAP:ABE-0013131" + ], + [ + "gene_synonym", + "GI:16131842" + ], + [ + "gene_synonym", + "b4016" + ], + [ + "gene_synonym", + "ECK4008" + ] + ], + "dna_sequence": "ATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGACGCGGCATTTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTACTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAATAAAAGCCGTGACATCCATTACATTATTCGCCATCTGACGGAAACGCTGGGGACAGACAACCTCGCGGAAAGTCATTTACAGGTGGCGAACGAACTGTTTTACCGCAATAAAGCCGCCTGGCTGGTAGGCAAACTGATCACACCTTCCGGCACATTGCCATTTTTGCTGCCGATCCACCAGACGGACGACGGCGAGTTATTTATTGATACCTGCCTGACGACGACCGCCGAAGCGAGCATTGTTTTTGGCTTTGCGCGTTCTTATTTTATGGTTTATGCGCCGCTGCCCGCAGCGCTGGTCGAGTGGCTACGGGAAATTCTGCCAGGTAAAACCACCGCTGAATTGTATATGGCTATCGGCTGCCAGAAGCACGCCAAAACCGAAAGCTACCGCGAATATCTCGTTTATCTACAGGGCTGTAATGAGCAGTTCATTGAAGCGCCGGGTATTCGTGGAATGGTGATGTTGGTGTTTACGCTGCCGGGCTTTGATCGGGTATTCAAAGTCATCAAAGACAGGTTCGCGCCGCAGAAAGAGATGTCTGCCGCTCACGTTCGTGCCTGCTATCAACTGGTGAAAGAGCACGATCGCGTGGGCCGAATGGCGGACACCCAGGAGTTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGTTTAAAAACTTCGGTGTCACCCGTCACGGGCGTGTGGTTTTTTATGATTACGATGAAATTTGCTACATGACGGAAGTGAATTTCCGCGACATCCCGCCGCCGCGCTATCCGGAAGACGAACTTGCCAGCGAACCGTGGTACAGCGTCTCGCCGGGCGATGTTTTCCCGGAAGAGTTTCGCCACTGGCTATGCGCCGACCCGCGTATTGGTCCGCTGTTTGAAGAGATGCACGCCGACCTGTTCCGCGCTGATTACTGGCGCGCACTACAAAACCGCATACGTGAAGGGCATGTGGAAGATGTTTATGCGTATCGGCGCAGGCAAAGATTTAGCGTACGGTATGGGGAGATGCTTTTTTGA", 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"gene_synonym", + "yjaC" + ], + [ + "gene_synonym", + "GeneID:944933" + ], + [ + "gene_synonym", + "NP_418441.1" + ], + [ + "gene_synonym", + "arpA" + ], + [ + "gene_synonym", + "JW3977" + ], + [ + "gene_synonym", + "EcoGene:EG11208" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23325" + ], + [ + "gene_synonym", + "ASAP:ABE-0013133" + ], + [ + "gene_synonym", + "GI:16131843" + ], + [ + "gene_synonym", + "b4017" + ], + [ + "gene_synonym", + "ECK4009" + ] + ], + "dna_sequence": "ATGATTACTCGTATTCCTCGTAGTTCTTTCTCTGCAAATATTAATAATACAGCCCAGACAAATGAACACCAAACCCTGAGTGAATTGTTTTATAAAGAACTCGAGGATAAATTTTCTGGCAAGGAGCTGGCGACGCCTCTATTAAAAAGCTTCTCAGAGAACTGTAGACAAAATGGTCGTCATATCTTTAGCAACAAGGATTTTGTCATTAAATTTTCCACGTCCGTCTTACAAGCTGATAAGAAAGAAATTACGATAATTAATAAAAACGAAAACACGACACTTACTCAAACCATTGCCCCAATATTTGAAAAATACCTAATGGAAATTTTACCTCAACGCTCAGACACTCTTGATAAACAAGAATTAAACCTAAAATCAGATAGAAAAGAAAAAGAATTCCCAAGAATTAAACTTAATGGTCAATGTTATTTTCCGGGGCGACCCCAAAACCGTATAGTATGCCGACACATTGCTGCACAATATATTAATGATATTTATCAGAATGTTGATTACAAACCCCATCAAGATGATTACTCTTCAGCTGAAAAATTTCTCACGCACTTCAACAAAAAATGCAAAAACCAGACTTTGGCGTTGGTTTCCAGCCGTCCTGAGGGGCGTTGCGTTGCTGCCTGCGGTGATTTCGGGCTAGTTATGAAAGCATATTTTGACAAGATGGAATCAAATGGCATCAGTGTTATGGCAGCCATATTACTGGTGGATAACCATGCTTTGACGGTCCGGCTAAGAATAAAGAACACAACTGAAGGATGTACCCATTACGTGGTTTCGGTTTATGATCCTAATGTAACTAACGATAAAATAAGAATTATGAGCGAAAGCAAAGAGAATATTAAACACTATTCTCTGATGGATTTTATGAATGTAGATTATAGCCTCCTGAAATGGTCAAATGATCATGTTATTAATCAATCTGTTGCAATAATTCCAGCACTTCCGAAAGAACAGCTATTGATGTTAAAAGGATCTGTGGATGAAATAACCCCTCCATTATCACCTGCAACGATGAATTTGCTAATGGCAATTGGTCAGAATCACCAACTTACGCAACTGATGATTCAACTCCAGAAAATGCCAGAACTACATAGAACAGAAATGTTGACTGCCTATAATAGTATTAACCTGCCAGGTTTATATTTGGCTATAAATTATGGTAATGCGGATATCGTTGAGACTATTTTCAATTCATTGTCAGAAACAGGATATGAAGGATTACTCTCGAAAAAAAATCTCATGCATATTCTGGAGGCAAAAGATAAAAATGGTTTTTCTGGATTATTTTTAGCGATATCACGTAAGGATAAAAATGTTGTAACCTCGATTCTGAACGCCTTACCTAAACTGGCCGCAACACATCATTTAGATAACGAACAAGTGTATAAATTCCTGAGTGCCAAAAATAGAACGTCCAGCCATGTTTTATACCATGTTATGGCGAATGGTGATGCCGACATGCTGAAAATTGTTTTGAACGCGTTACCTTTGTTAATTCGCACATGTCATTTGACTAAAGAACAGGTACTCGATCTCCTGAAGGCAAAGGATTTTTATGGTTGCCCAGGACTATATCTGGCGATGCAAAATGGACATAGCGATATCGTGAAAGTTATTCTTGAAGCATTGCCCAGCCTAGCCCAGGAAATTAACATTTCAGCTTCCGATATTGTAGATCTTCTGACCGCTAAAAGTCTTGCGCGCGACACGGGTTTGTTTATGGCCATGCAGCGCGGACACATGAACGTTATTAATACTATTTTTAACGCATTACCCACTCTGTTTAATACGTTTAAATTCGATAAAAAAAATATGAAGCCCCTCCTCCTGGCAAATAATTCTAATGAATATCCCGGTTTGTTTTCAGCGATACAGCATAAACAACAAAATGTTGTAGAGACGGTTTATCTTGCTTTATCTGACCATGCACGCCTGTTTGGATTTACCGCTGAAGATATTATGGATTTTTGGCAACACAAAGCCCCACAAAAATACTCTGCCTTTGAGTTGGCTTTTGAATTTGGTCACCGGGTTATTGCTGAATTAATCCTTAATACATTAAATAAGATGGCTGAAAGCTTTGGCTTTACGGATAACCCTCGATACATTGCGGAGAAAAATTATATGGAAGCTTTACTCAAAAAAGCATCTCCCCATACCGTACGCTAA", 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"MITRIPRSSFSANINNTAQTNEHQTLSELFYKELEDKFSGKELATPLLKSFSENCRQNGRHIFSNKDFVIKFSTSVLQADKKEITIINKNENTTLTQTIAPIFEKYLMEILPQRSDTLDKQELNLKSDRKEKEFPRIKLNGQCYFPGRPQNRIVCRHIAAQYINDIYQNVDYKPHQDDYSSAEKFLTHFNKKCKNQTLALVSSRPEGRCVAACGDFGLVMKAYFDKMESNGISVMAAILLVDNHALTVRLRIKNTTEGCTHYVVSVYDPNVTNDKIRIMSESKENIKHYSLMDFMNVDYSLLKWSNDHVINQSVAIIPALPKEQLLMLKGSVDEITPPLSPATMNLLMAIGQNHQLTQLMIQLQKMPELHRTEMLTAYNSINLPGLYLAINYGNADIVETIFNSLSETGYEGLLSKKNLMHILEAKDKNGFSGLFLAISRKDKNVVTSILNALPKLAATHHLDNEQVYKFLSAKNRTSSHVLYHVMANGDADMLKIVLNALPLLIRTCHLTKEQVLDLLKAKDFYGCPGLYLAMQNGHSDIVKVILEALPSLAQEINISASDIVDLLTAKSLARDTGLFMAMQRGHMNVINTIFNALPTLFNTFKFDKKNMKPLLLANNSNEYPGLFSAIQHKQQNVVETVYLALSDHARLFGFTAEDIMDFWQHKAPQKYSAFELAFEFGHRVIAELILNTLNKMAESFGFTDNPRYIAEKNYMEALLKKASPHTVR", + "protein_translation_length": 728, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16528" + ], + [ + "gene_synonym", + "JW3978" + ], + [ + "gene_synonym", + "EcoGene:EG10491" + ], + [ + "gene_synonym", + "GI:90111675" + ], + [ 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"md5": "e285c7d31c4dcc1f13ffab7a7fc73b9a", + "parent_gene": "", + "protein_md5": "1717022bae5763ebfa317e2ebce04a07", + "protein_translation": "MVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSVALTELAQQAGLPNSTTHRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLLAIVHPILRNLMEESGETVNMAVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASGAGKAFLAQLSEEQVTKLLHRKGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHALGLRCLAACIFDEHREPFAAISISGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW3979" + ], + [ + "gene_synonym", + "GeneID:948522" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13009" + ], + [ + "gene_synonym", + "ASAP:ABE-0013140" + ], + [ + "gene_synonym", + "b4019" + ], + [ + "gene_synonym", + "ECK4011" + ], + [ + "gene_synonym", + "metH" + ], + [ + "gene_synonym", + "NP_418443.1" + ], + [ + "gene_synonym", + "EcoGene:EG10587" + ], + [ + "gene_synonym", + "GI:16131845" + ] + ], + "dna_sequence": 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"MSSKVEQLRAQLNERILVLDGGMGTMIQSYRLNEADFRGERFADWPCDLKGNNDLLVLSKPEVIAAIHNAYFEAGADIIETNTFNSTTIAMADYQMESLSAEINFAAAKLARACADEWTARTPEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDGLVAAYRESTKALVEGGADLILIETVFDTLNAKAAVFAVKTEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSLRHAEALTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAGLPNAFGEYDLDADTMAKQIREWAQAGFLNIVGGCCGTTPQHIAAMSRAVEGLAPRKLPEIPVACRLSGLEPLNIGEDSLFVNVGERTNVTGSAKFKRLIKEEKYSEALDVARQQVENGAQIIDINMDEGMLDAEAAMVRFLNLIAGEPDIARVPIMIDSSKWDVIEKGLKCIQGKGIVNSISMKEGVDAFIHHAKLLRRYGAAVVVMAFDEQGQADTRARKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQDFIGACEDIKRELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAGQLAIYDDLPAELRDAVEDVILNRRDDGTERLLELAEKYRGSKTDDTANAQQAEWRSWEVNKRLEYSLVKGITEFIEQDTEEARQQATRPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAYLEPFIEASKEQGKTNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKAHTAVKIEQNYSGPTVYVQNASRTVGVVAALLSDTQRDDFVARTRKEYETVRIQHGRKKPRTPPVTLEAARDNDFAFDWQAYTPPVAHRLGVQEVEASIETLRNYIDWTPFFMTWSLAGKYPRILEDEVVGVEAQRLFKDANDMLDKLSAEKTLNPRGVVGLFPANRVGDDIEIYRDETRTHVINVSHHLRQQTEKTGFANYCLADFVAPKLSGKADYIGAFAVTGGLEEDALADAFEAQHDDYNKIMVKALADRLAEAFAEYLHERVRKVYWGYAPNENLSNEELIRENYQGIRPAPGYPACPEHTEKATIWELLEVEKHTGMKLTESFAMWPGASVSGWYFSHPDSKYYAVAQIQRDQVEDYARRKGMSVTEVERWLAPNLGYDAD", 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"GTGTTAACGCTGCTTCACCTGCTTTCTGCCGTCGCCCTGCTGGTCTGGGGGACTCATATTGTTCGAACCGGCGTAATGCGCGTCTTCGGCGCGCGTTTGCGTACTGTCCTTAGCCGGAGCGTCGAAAAAAAGCCGCTCGCCTTTTGCGCGGGGATCGGCGTTACCGCACTGGTACAGAGCAGTAATGCCACCACCATGCTGGTGACCTCGTTTGTCGCTCAGGATCTGGTAGCCCTCGCACCGGCTCTGGTCATTGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTCAACAACAGTGCCGCCAATGCCGCAGCCCGCCGTGTCGCGCTGGGTAGTCTGCTGTTTAAGCTGGTGGGTAGCCTGATTATCCTGCCGTTTGTCCATTTGCTGGCAGAGACAATGGGGAAGTTGTCATTGCCAAAAGCGGAACTGGTGATCTATTTCCACGTCTTCTACAACCTTGTACGTTGCCTGGTCATGCTGCCATTTGTTGACCCGATGGCACGGTTTTGCAAAACGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGCGAAACCCTGCGCATTGGCGACGCCATGGAACAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCGGATGCCAAAAGAAGAGCTGGCGGAGGAAGAGTCGCGCCGCTGGGCAGAGATCATCGAAATGTCGCTCAACCTTGAACAGGCCTCCGATATCGTCGAGCGCATGGGCAGCGAAATTGCTGACAAATCACTGGCAGCACGGCGGGCATTTTCGCTTGATGGGTTGAAGGAACTGGATGCGCTCTATGAGCAATTGCTCAGTAATTTAAAGCTGGCAATGTCGGTGTTCTTCTCTGGCGATGTCACCAGCGCTCGTCGTTTGCGTCGCAGCAAACATCGTTTTCGCATTCTTAATCGCCGCTATTCCCACGCCCACGTCGATCGCCTGCATCAGCAAAACGTGCAGAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAA", 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], + [ + "gene_synonym", + "JW3981" + ], + [ + "gene_synonym", + "pepE" + ], + [ + "gene_synonym", + "NP_418445.1" + ], + [ + "gene_synonym", + "b4021" + ], + [ + "gene_synonym", + "ASAP:ABE-0013146" + ], + [ + "gene_synonym", + "EcoGene:EG11920" + ], + [ + "gene_synonym", + "ECK4013" + ], + [ + "gene_synonym", + "GI:16131847" + ], + [ + "gene_synonym", + "GeneID:948520" + ] + ], + "dna_sequence": 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"protein_translation": "MELLLLSNSTLPGKAWLEHALPLIAEQLQGRRSAVFIPFAGVTQTWDDYTAKTAAVLAPLGVSVTGIHSVVDPVAAIENAEIVIVGGGNTFQLLKQCRERGLLAPITDVVKRGALYIGWSAGANLACPTIRTTNDMPIVDPQGFDALNLFPLQINPHFTNALPEGHKGETREQRIRELLVVAPELTIIGLPEGNWITVSKGHATLGGPNTTYVFKAGEEAVPLEAGHRF", + "protein_translation_length": 229, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yjbC" + ], + [ + "gene_synonym", + "JW3982" + ], + [ + "gene_synonym", + "GeneID:948519" + ], + [ + "gene_synonym", + "ECK4014" + ], + [ + "gene_synonym", + "NP_418446.1" + ], + [ + "gene_synonym", + "rluF" + ], + [ + "gene_synonym", + "ASAP:ABE-0013150" + ], + [ + "gene_synonym", + "b4022" + ], + [ + "gene_synonym", + "EcoGene:EG11921" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32684" + ], + [ + "gene_synonym", + "GI:16131848" + ] + ], + "dna_sequence": "ATGCTGCCCGACTCATCAGTCCGTTTAAATAAATACATCAGCGAAAGCGGAATTTGCTCACGCCGCGAAGCGGATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAACGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATGGCGAGCGCGATAACATTGTCGATTTCGTTAACCACAGCAAACGCGTGTTCCCGATTGGCCGCCTGGATAAAGACTCCCAGGGGCTGATTTTCCTCACCAATCACGGCGATCTGGTGAATAAGATCCTGCGTGCTGGCAATGATCATGAGAAAGAGTATCTGGTGACGGTCGATAAACCGATTACCGAGGAGTTTATTCGCGGCATGAGTGCGGGGGTGCCAATCCTCGGGACAGTGACCAAAAAGTGCAAAGTTAAAAAAGAAGCGCCGTTTGTCTTCCGCATTACCCTGGTGCAGGGGCTGAACCGTCAGATCCGGCGCATGTGCGAGCATTTCGGCTATGAAGTGAAAAAGCTGGAACGCACGCGCATCATGAACGTTAGCTTAAGCGGCATTCCGCTGGGGGAATGGCGCGATTTAACCGACGATGAGTTAATCGACCTCTTTAAGCTCATTGAAAATTCCTCTTCCGAGGTAAAACCTAAAGCGAAGGCCAAACCGAAAACAGCGGGCATCAAACGTCCAGTCGTTAAGATGGAAAAAACGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGA", + "dna_sequence_length": 873, + "functions": [ + "23S rRNA pseudouridine(2604) synthase" + ], + "id": "CDS_3937", + "location": [ + [ + "NC_000913", + 4230354, + "+", + 873 + ] + ], + "md5": "5bfbed0780696a71d901a04cc860eab4", + "parent_gene": "", + "protein_md5": "18085dc49132ac66c5998c97ebbf1595", + "protein_translation": "MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR", + "protein_translation_length": 290, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yjbD" + ], + [ + "gene_synonym", + "JW3983" + ], + [ + "gene_synonym", + "GeneID:948518" + ], + [ + "gene_synonym", + "GI:16131849" + ], + [ + "gene_synonym", + "ASAP:ABE-0013153" + ], + [ + "gene_synonym", + "ECK4015" + ], + [ + "gene_synonym", + "b4023" + ], + [ + "gene_synonym", + "EcoGene:EG11922" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32685" + ], + [ + "gene_synonym", + "NP_418447.1" + ] + ], + "dna_sequence": "ATGGCACTCCCCCGTATTACCCAAAAAGAGATGACTGAACGCGAGCAGCGTGAACTTAAAACACTGCTGGATCGGGCGCGGATTGCGCATGGTCGCGTATTGACCAACTCCGAAACCAACAGCATTAAGAAAGATTACATCGATAAATTAATGGTTGAGCGTGAGGCTGAAGCGAAAAAAGCCCGCCAGTTGAAGAAAAAGCAGGCTTATAAACCGGATCCTGAAGCGTCATTTAGCTGGTCAGCAAATACGTCGACGCGCGGCAGGCGCTAA", + "dna_sequence_length": 273, + "functions": [ + "DUF3811 family protein" + ], + "id": "CDS_3938", + "location": [ + [ + "NC_000913", + 4231631, + "-", + 273 + ] + ], + "md5": "4c00af5ea47167f72ec6dc93223af4f2", + "parent_gene": "", + "protein_md5": "86e49383df817859f3cd644300bf75d7", + "protein_translation": "MALPRITQKEMTEREQRELKTLLDRARIAHGRVLTNSETNSIKKDYIDKLMVEREAEAKKARQLKKKQAYKPDPEASFSWSANTSTRGRR", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW3984" + ], + [ + "gene_synonym", + "ECK4016" + ], + [ + "gene_synonym", + "ASAP:ABE-0013156" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08660" + ], + [ + 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"gene_synonym", + "malK" + ], + [ + "gene_synonym", + "ECK4027" + ], + [ + "gene_synonym", + "GeneID:948537" + ], + [ + "gene_synonym", + "GI:16131861" + ], + [ + "gene_synonym", + "JW3995" + ], + [ + "gene_synonym", + "EcoGene:EG10558" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG10559" + ], + [ + "gene_synonym", + "b4037" + ], + [ + "gene_synonym", + "malM" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03841" + ], + [ + "gene_synonym", + "ECK4029" + ], + [ + "gene_synonym", + "molA" + ], + [ + "gene_synonym", + "GI:16131863" + ], + [ + "gene_synonym", + "JW3997" + ] + ], + "dna_sequence": 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"functions": [ + "uncharacterized protein" + ], + "id": "CDS_3963", + "location": [ + [ + "NC_000913", + 4260321, + "+", + 255 + ] + ], + "md5": "b08c2313b2e0bcda6a93d0135bee2dc8", + "parent_gene": "", + "protein_md5": "38a3977740e37b9bb28288ef09c15954", + "protein_translation": "MLKIIPGATGYFNKTLNSNQFDNEDAIKDKLDNRGSIKGKLNNIYGKSIDYAALRHRDIIIAKIDLFIQRITHNLWHARKKMCF", + "protein_translation_length": 84, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_418472.1" + ], + [ + "gene_synonym", + "yjbM" + ], + [ + "gene_synonym", + "JW4008" + ], + [ + "gene_synonym", + "GeneID:948550" + ], + [ + "gene_synonym", + "b4048" + ], + [ + "gene_synonym", + "ASAP:ABE-0013255" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32694" + ], + [ + "gene_synonym", + "GI:16131874" + ], + [ + "gene_synonym", + "ECK4040" + ], + [ + "gene_synonym", + "EcoGene:EG11931" + ] + ], + "dna_sequence": 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"protein_translation": "MWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICNPGDNKDAMPIEQCTFDVETKNDLPSTVQLFYEESKDNEPLANIHFQAIGSGFLTFVNACQEHDDNSLKLFASLLISLSYSSAYADLSETVYINENNESYLKAQFEKLSQRDMKKYLGEMKRLADGGEMNFDGYLDKMSHLVNEGTLDPDILSKMRDAAPQLISFAKSFDPTSKEEIKILTDTSKLIYDLFGVKSEK", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_418473.3" + ], + [ + "gene_synonym", + "GeneID:948558" + ], + [ + "gene_synonym", + "GI:635341467" + ], + [ + "gene_synonym", + "yjbN" + ], + [ + "gene_synonym", + "dusA" + ], + [ + "gene_synonym", + "b4049" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32695" + ], + [ + "gene_synonym", + "JW5950" + ], + [ + "gene_synonym", + "EcoGene:EG11932" + ], + [ + "gene_synonym", + "ECK4041" + ], + [ + "gene_synonym", + "ASAP:ABE-0013258" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_418474.4" + ], + [ + "gene_synonym", + "yjbO" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32696" + ], + [ + "gene_synonym", + "EcoGene:EG11933" + ], + [ + "gene_synonym", + "ECK4042" + ] + ], + "dna_sequence": "ATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTCGGCGGTATGCTGGCATTGATGATTAAGTTGCTGCCGTGGTTACTACTGGCGATTGCGGTGGTGTGGGTTATTAAGGCGATTAAAGCACCAAAAGTGCCGAAATATCAGCGTTATGACCGCTGGCGTTACTAA", + "dna_sequence_length": 243, + "functions": [ + "phage shock protein G" + ], + "id": "CDS_3966", + "location": [ + [ + "NC_000913", + 4262840, + "+", + 243 + ] + ], + "md5": "4164a4be6f5aa4199cf8b649d0920017", + "parent_gene": "", + "protein_md5": "4443201c69f83993fd291831999936fe", + "protein_translation": "MLELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALMIKLLPWLLLAIAVVWVIKAIKAPKVPKYQRYDRWRY", + "protein_translation_length": 80, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b4051" + ], + [ + "gene_synonym", + "JW4011" + ], + [ + "gene_synonym", + "hzc" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28304" + ], + [ + "gene_synonym", + "hcz" + ], + [ + "gene_synonym", + "EcoGene:EG11492" + ], + [ + "gene_synonym", + "ASAP:ABE-0013262" + ], + [ + "gene_synonym", + "GeneID:948556" + ], + [ + "gene_synonym", + "NP_418475.1" + ], + [ + "gene_synonym", + "GI:16131877" + ], + [ + "gene_synonym", + "qorA" + ], + [ + "gene_synonym", + "ECK4043" + ], + [ + "gene_synonym", + "qor" + ] + ], + "dna_sequence": 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"dna_sequence_length": 984, + "functions": [ + "quinone oxidoreductase, NADPH-dependent" + ], + "id": "CDS_3967", + "location": [ + [ + "NC_000913", + 4264231, + "-", + 984 + ] + ], + "md5": "4aedb24e18190b947df62c57035161d9", + "parent_gene": "", + "protein_md5": "ee7e32053af8174284ba5d1197f85c7e", + "protein_translation": "MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b4052" + ], + [ + "gene_synonym", + "ASAP:ABE-0013269" + ], + [ + "gene_synonym", + "JW4012" + ], + [ + "gene_synonym", + "NP_418476.1" + ], + [ + "gene_synonym", + "grpA" + ], + [ + "gene_synonym", + "GeneID:948555" + ], + [ + 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"UniProtKB/Swiss-Prot:P0AF50" + ], + [ + "gene_synonym", + "b4057" + ], + [ + "gene_synonym", + "GeneID:948560" + ], + [ + "gene_synonym", + "JW4018" + ], + [ + "gene_synonym", + "NP_418481.1" + ], + [ + "gene_synonym", + "ECK4049" + ], + [ + "gene_synonym", + "yjbR" + ], + [ + "gene_synonym", + "ASAP:ABE-0013288" + ], + [ + "gene_synonym", + "GI:16131883" + ], + [ + "gene_synonym", + "EcoGene:EG11936" + ] + ], + "dna_sequence": "ATGACCATTTCGGAGTTGCTACAATATTGCATGGCAAAACCAGGCGCAGAACAGAGCGTGCATAATGACTGGAAAGCGACGCAGATCAAAGTGGAAGATGTACTGTTTGCGATGGTGAAAGAAGTAGAAAATCGCCCAGCTGTTTCGCTGAAAACCAGCCCGGAGCTGGCGGAGCTGCTACGTCAGCAGCACAGCGATGTGCGTCCAAGCCGCCATCTGAATAAAGCGCACTGGAGCACCGTGTATCTCGACGGTTCGCTGCCAGATTCGCAAATCTATTATCTGGTGGATGCGTCTTATCAGCAGGCGGTGAATTTACTGCCGGAAGAAAAACGTAAATTGCTGGTGCAACTCTGA", + "dna_sequence_length": 357, + "functions": [ + "DUF419 family protein" + ], + "id": "CDS_3974", + "location": [ + [ + "NC_000913", + 4270658, + "+", + 357 + ] + ], + "md5": 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"UniProtKB/Swiss-Prot:P32701" + ], + [ + "gene_synonym", + "GI:16131887" + ], + [ + "gene_synonym", + "ECK4053" + ], + [ + "gene_synonym", + "EcoGene:EG11938" + ], + [ + "gene_synonym", + "b4061" + ], + [ + "gene_synonym", + "JW4022" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "ASAP:ABE-0013311" + ], + [ + "gene_synonym", + "EcoGene:EG10958" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9E2" + ], + [ + "gene_synonym", + "GI:16131888" + ], + [ + "gene_synonym", + "soxS" + ], + [ + "gene_synonym", + "JW4023" + ], + [ + "gene_synonym", + "b4062" + ], + [ + "gene_synonym", + "NP_418486.1" + ], + [ + "gene_synonym", + "ECK4054" + ] + ], + "dna_sequence": "ATGTCCCATCAGAAAATTATTCAGGATCTTATCGCATGGATTGACGAGCATATTGACCAGCCGCTTAACATTGATGTAGTCGCAAAAAAATCAGGCTATTCAAAGTGGTACTTGCAACGAATGTTCCGCACGGTGACGCATCAGACGCTTGGCGATTACATTCGCCAACGCCGCCTGTTACTGGCCGCCGTTGAGTTGCGCACCACCGAGCGTCCGATTTTTGATATCGCAATGGACCTGGGTTATGTCTCGCAGCAGACCTTCTCCCGCGTTTTCCGTCGGCAGTTTGATCGCACTCCCAGCGATTATCGCCACCGCCTGTAA", + "dna_sequence_length": 324, + "functions": [ + "superoxide response regulon transcriptional activator", + "autoregulator" + ], + "id": "CDS_3979", + "location": [ + [ + "NC_000913", + 4277383, + "-", + 324 + ] + ], + "md5": "4e123c4a71129ec7bef05b29a948a9e2", + "parent_gene": "", + "protein_md5": "777af84098a120aab0a33c6cb4269d71", + "protein_translation": "MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL", + "protein_translation_length": 107, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "marC" + ], + [ + "gene_synonym", + "ASAP:ABE-0013316" + ], + [ + "gene_synonym", + "GeneID:948566" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACS2" + ], + [ + "gene_synonym", + "EcoGene:EG10957" + ], + [ + "gene_synonym", + "GI:16131889" + ], + [ + "gene_synonym", + "soxR" + ], + [ + "gene_synonym", + "b4063" + ], + [ + "gene_synonym", + "NP_418487.1" + ], + [ + "gene_synonym", + "JW4024" + ], + [ + "gene_synonym", + "ECK4055" + ] + ], + "dna_sequence": "ATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGTGACGAACTGGACGGATGTATTGGTTGTGGCTGCCTTTCGCGCAGTGATTGCCCGTTGCGTAACCCGGGCGACCGCTTAGGAGAAGAAGGTACCGGCGCACGCTTGCTGGAAGATGAACAAAACTAA", + "dna_sequence_length": 465, + "functions": [ + "redox-sensitive transcriptional activator of soxS", + "autorepressor" + ], + "id": "CDS_3980", + "location": [ + [ + "NC_000913", + 4277469, + "+", + 465 + ] + ], + "md5": "ca5e75100fa5b00aa04d15c844d868dd", + "parent_gene": "", + "protein_md5": "a1a3f0ca97e2d301588bead4f4b7ffac", + "protein_translation": "MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYKRDVLRYVAIIKIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN", + "protein_translation_length": 154, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yjcD" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF52" + ], + [ + "gene_synonym", + "ASAP:ABE-0013319" + ], + [ + "gene_synonym", + "NP_418488.1" + ], + [ + "gene_synonym", + "ECK4057" + ], + [ + "gene_synonym", + "GeneID:948565" + ], + [ + "gene_synonym", + "EcoGene:EG11939" + ], + [ + "gene_synonym", + "GI:16131890" + ], + [ + "gene_synonym", + "ghxP" + ], + [ + "gene_synonym", + "JW4025" + ], + [ + "gene_synonym", + "b4064" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG11941" + ], + [ + "gene_synonym", + "GeneID:948576" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32704" + ], + [ + "gene_synonym", + "ASAP:ABE-0013325" + ], + [ + "gene_synonym", + "ECK4059" + ], + [ + "gene_synonym", + "JW4027" + ], + [ + "gene_synonym", + "b4066" + ], + [ + "gene_synonym", + "GI:16131892" + ], + [ + "gene_synonym", + "NP_418490.1" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK4061" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF54" + ], + [ + "gene_synonym", + "yjcH" + ], + [ + "gene_synonym", + "NP_418492.1" + ], + [ + "gene_synonym", + "JW4029" + ], + [ + "gene_synonym", + "b4068" + ], + [ + "gene_synonym", + "ASAP:ABE-0013330" + ], + [ + "gene_synonym", + "GI:16131894" + ], + [ + "gene_synonym", + "EcoGene:EG11943" + ] + ], + "dna_sequence": "ATGAATGGCACTATTTATCAGCGGATAGAAGACAATGCGCATTTCAGGGAGTTAGTCGAAAAACGGCAACGGTTTGCCACCATCCTGTCGATTATTATGCTGGCAGTTTATATCGGCTTTATTTTACTGATCGCCTTCGCGCCCGGCTGGCTGGGCACGCCGCTGAATCCGAACACCAGCGTCACACGCGGTATTCCAATTGGTGTTGGAGTGATTGTGATCTCCTTTGTTCTCACCGGTATCTACATCTGGCGGGCGAACGGCGAATTCGACCGTCTTAATAATGAAGTCCTGCATGAGGTACAAGCATCATGA", + "dna_sequence_length": 315, + "functions": [ + "DUF485 family inner membrane protein" + ], + "id": "CDS_3985", + "location": [ + [ + "NC_000913", + 4285213, + "-", + 315 + ] + ], + "md5": "7ffac60ec9e851690a1d49c3eddc70cd", + "parent_gene": "", + "protein_md5": "f0ca57b7d8601f2a5ccdf27978c77e4d", + "protein_translation": "MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQAS", + "protein_translation_length": 104, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4062" + ], + [ + "gene_synonym", + "b4069" + ], + [ + "gene_synonym", + "EcoGene:EG11448" + ], + [ + "gene_synonym", + "GeneID:948572" + ], + [ + "gene_synonym", + "acs" + ], + [ + "gene_synonym", + "NP_418493.1" + ], + [ + "gene_synonym", + "yfaC" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27550" + ], + [ + "gene_synonym", + "GI:16131895" + ], + [ + "gene_synonym", + "JW4030" + ], + [ + "gene_synonym", + "acsA" + ], + [ + "gene_synonym", + "ASAP:ABE-0013337" + ] + ], + "dna_sequence": "ATGAGCCAAATTCACAAACACACCATTCCTGCCAACATCGCAGACCGTTGCCTGATAAACCCTCAGCAGTACGAGGCGATGTATCAACAATCTATTAACGTACCTGATACCTTCTGGGGCGAACAGGGAAAAATTCTTGACTGGATCAAACCTTACCAGAAGGTGAAAAACACCTCCTTTGCCCCCGGTAATGTGTCCATTAAATGGTACGAGGACGGCACGCTGAATCTGGCGGCAAACTGCCTTGACCGCCATCTGCAAGAAAACGGCGATCGTACCGCCATCATCTGGGAAGGCGACGACGCCAGCCAGAGCAAACATATCAGCTATAAAGAGCTGCACCGCGACGTCTGCCGCTTCGCCAATACCCTGCTCGAGCTGGGCATTAAAAAAGGTGATGTGGTGGCGATTTATATGCCGATGGTGCCGGAAGCCGCGGTTGCGATGCTGGCCTGCGCCCGCATTGGCGCGGTGCATTCGGTGATTTTCGGCGGCTTCTCGCCGGAAGCCGTTGCCGGGCGCATTATTGATTCCAACTCACGACTGGTGATCACTTCCGACGAAGGTGTGCGTGCCGGGCGCAGTATTCCGCTGAAGAAAAACGTTGATGACGCGCTGAAAAACCCGAACGTCACCAGCGTAGAGCATGTGGTGGTACTGAAGCGTACTGGCGGGAAAATTGACTGGCAGGAAGGGCGCGACCTGTGGTGGCACGACCTGGTTGAGCAAGCGAGCGATCAGCACCAGGCGGAAGAGATGAACGCCGAAGATCCGCTGTTTATTCTCTACACCTCCGGTTCTACCGGTAAGCCAAAAGGTGTGCTGCATACTACCGGCGGTTATCTGGTGTACGCGGCGCTGACCTTTAAATATGTCTTTGATTATCATCCGGGTGATATCTACTGGTGCACCGCCGATGTGGGCTGGGTGACCGGACACAGTTACTTGCTGTACGGCCCGCTGGCCTGCGGTGCGACCACGCTGATGTTTGAAGGCGTACCCAACTGGCCGACGCCTGCCCGTATGGCGCAGGTGGTGGACAAGCATCAGGTCAATATTCTCTATACCGCACCCACGGCGATCCGCGCGCTGATGGCGGAAGGCGATAAAGCGATCGAAGGCACCGACCGTTCGTCGCTGCGCATTCTCGGTTCCGTGGGCGAGCCAATTAACCCGGAAGCGTGGGAGTGGTACTGGAAAAAAATCGGCAACGAGAAATGTCCGGTGGTCGATACCTGGTGGCAGACCGAAACCGGCGGTTTCATGATCACCCCGCTGCCTGGCGCTACCGAGCTGAAAGCCGGTTCGGCAACACGTCCGTTCTTCGGCGTGCAACCGGCGCTGGTCGATAACGAAGGTAACCCGCTGGAGGGGGCCACCGAAGGTAGCCTGGTAATCACCGACTCCTGGCCGGGTCAGGCGCGTACGCTGTTTGGCGATCACGAACGTTTTGAACAGACCTACTTCTCCACCTTCAAAAATATGTATTTCAGCGGCGACGGCGCGCGTCGCGATGAAGATGGCTATTACTGGATAACCGGGCGTGTGGACGACGTGCTGAACGTCTCCGGTCACCGTCTGGGGACGGCAGAGATTGAGTCGGCGCTGGTGGCGCATCCGAAGATTGCCGAAGCCGCCGTAGTAGGTATTCCGCACAATATTAAAGGTCAGGCGATCTACGCCTACGTCACGCTTAATCACGGGGAGGAACCGTCACCAGAACTGTACGCAGAAGTCCGCAACTGGGTGCGTAAAGAGATTGGCCCGCTGGCGACGCCAGACGTGCTGCACTGGACCGACTCCCTGCCTAAAACCCGCTCCGGCAAAATTATGCGCCGTATTCTGCGCAAAATTGCGGCGGGCGATACCAGCAACCTGGGCGATACCTCGACGCTTGCCGATCCTGGCGTAGTCGAGAAGCTGCTTGAAGAGAAGCAGGCTATCGCGATGCCATCGTAA", 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652, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4063" + ], + [ + "gene_synonym", + "NP_418494.1" + ], + [ + "gene_synonym", + "EcoGene:EG11781" + ], + [ + "gene_synonym", + "ASAP:ABE-0013342" + ], + [ + "gene_synonym", + "nrfA" + ], + [ + "gene_synonym", + "b4070" + ], + [ + "gene_synonym", + "JW4031" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABK9" + ], + [ + "gene_synonym", + "GI:16131896" + ], + [ + "gene_synonym", + "GeneID:948571" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0013360" + ], + [ + "gene_synonym", + "GI:16131904" + ], + [ + "gene_synonym", + "yjcO" + ], + [ + "gene_synonym", + "GeneID:948586" + ], + [ + "gene_synonym", + "b4078" + ], + [ + "gene_synonym", + "JW4039" + ], + [ + "gene_synonym", + "NP_418502.1" + ] + ], + "dna_sequence": "ATGAAAAAAATTATCGCATTGATGTTGTTTTTGACATTCTTTGCCCACGCCAACGACTCCGAGCCTGGCAGCCAGTATTTAAAGGCAGCAGAGGCCGGGGACCGACGCGCACAATATTTTCTTGCCGACAGCTGGTTTAGCTCCGGCGATTTGAGCAAAGCCGAATATTGGGCACAGAAAGCCGCCGACAGCGGTGATGCTGATGCCTGCGCGCTGCTGGCGCAGATCAAAATCACCAATCCGGTCAGTCTGGACTATCCACAAGCAAAAGTTCTTGCAGAGAAAGCGGCGCAAGCGGGCAGTAAAGAAGGTGAAGTAACGCTGGCGCATATTCTGGTAAATACTCAAGCGGGTAAACCGGATTATCCAAAGGCAATTTCGCTGTTAGAAAACGCCTCGGAAGATCTGGAGAACGACTCTGCCGTCGATGCCCAAATGCTGCTTGGTTTGATTTACGCCAACGGCGTGGGCATTAAGGCCGACGATGACAAGGCAACCTGGTATTTCAAACGCAGCTCTGCAATTTCCCGAACCGGTTATTCCGAGTACTGGGCGGGAATGATGTTCTTAAACGGTGAAGAAGGTTTTATCGAGAAGAACAAGCAAAAGGCGCTGCACTGGTTGAACCTGAGCTGTATGGAAGGGTTTGATACCGGGTGTGAAGAGTTTGAAAAATTAACCAACGGTTAA", 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"gene_synonym", + "fdhF" + ], + [ + "gene_synonym", + "JW4040" + ] + ], + "dna_sequence": 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"ATGATCAATCGTCAACTTTCACGTCTGCTGTTGTGCAGCATTCTCGGCAGCACGACGCTGATTTCCGGCTGTGCCCTGGTACGTAAGGATTCTGCACCTCATCAACAGCTCAAACCGGAACAAATCAAACTGGCCGACGATATTCATCTTGCCAGCTCCGGCTGGCCGCAGGCGCAGTGGTGGAAACAACTCAATGACCCGCAGCTGGATGCGCTGATCCAACGGACGCTAAGTGGTTCACACACCCTCGCCGAAGCGAAACTGCGGGAAGAAAAAGCGCAGTCCCAGGCCGATTTGTTAGATGCCGGTTCACAATTACAGGTCGCAGCGTTAGGGATGCTCAACCGCCAACGTGTCTCGGCGAACGGCTTTTTAAGCCCTTATTCAATGGATGCGCCAGCACTGGGTATGGACGGGCCGTACTATACGGAAGCCACAGTAGGTTTGTTTGCCGGACTGGATCTTGATTTGTGGGGTGTGCATCGCTCAGCGGTTGCCGCCGCCATTGGCGCGCATAATGCCGCGCTGGCAGAAACCGCAGCAGTAGAGCTATCGCTGGCCACGGGCGTAGCGCAGCTTTATTACAGTATGCAGGCCAGCTATCAGATGCTCGATCTGTTAGAACAAACTCACGATGTGATTGATTACGCGGTGAAAGCGCACCAGAGTAAAGTGGCGCACGGTCTGGAAGCGCAAGTGCCTTTCCACGGCGCGCGGGCACAGATTCTGGCGGTCGATAAACAAATTGTTGCCGTCAAAGGGCAAATCACCGAAACGCGAGAATCTCTGCGTGCATTGATTGGCGCGGGAGCCAGCGATATGCCGGAGATCAGACCGGTGGCATTACCGCAAGTCCAGACCGGCATTCCGGCGACACTCTCTTATGAGTTGCTCGCCAGACGCCCGGATCTGCAAGCCATGCGCTGGTATGTTCAGGCGTCATTAGATCAGGTGGATTCCGCGCGGGCGTTGTTCTATCCGAGCTTTGATATCAAAGCGTTTTTCGGTCTGGACTCCATCCATCTGCATACCTTATTCAAAAAAACCAGTCGCCAGTTCAACTTCATCCCGGGTCTGAAATTGCCGCTGTTTGACGGTGGACGGTTGAATGCCAATCTCGAAGGCACGCGCGCCGCCAGCAACATGATGATTGAACGTTACAACCAGTCAGTACTGAACGCGGTGCGTGACGTTGCCGTCAACGGCACGCGTCTGCAAACGCTCAACGACGAGCGAGAAATGCAGGCTGAACGCGTGGAAGCCACGCGCTTTACCCAGCGCGCTGCCGAGGCCGCCTATCAGCGCGGCTTAACCAGCCGCTTACAGGCCACCGAAGCCCGGTTGCCAGTGCTTGCCGAAGAGATGTCATTACTGATGCTGGACAGCCGCCGGGTGATCCAAAGCATTCAGTTGATGAAATCGCTGGGCGGCGGGTATCAGGCAGGTCCCGTCGTCGAGAAAAAATAA", 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"MSALNSLPLPVVRLLAFFHEELSERRPGRVPQTVQLWVGCLLVILISMTFEIPFVALSLAVLFYGIQSNAFYTKFVAILFVVATVLEIGSLFLIYKWSYGEPLIRLIIAGPILMGCMFLMRTHRLGLVFFAVAIVAIYGQTFPAMLDYPEVVVRLTLWCIVVGLYPTLLMTLIGVLWFPSRAISQMHQALNDRLDDAISHLTDSLAPLPETRIEREALALQKLNVFCLADDANWRTQNAWWQSCVATVTYIYSTLNRYDPTSFADSQAIIEFRQKLASEINKLQHAVAEGQCWQSDWRISESEAMAARECNLENICQTLLQLGQMDPNTPPTPAAKPPSMAADAFTNPDYMRYAVKTLLACLICYTFYSGVDWEGIHTCMLTCVIVANPNVGSSYQKMVLRFGGAFCGAILALLFTLLVMPWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATLENVFGPVYDLVEIRDRALGIIIGTVVSAVIYTFVWPESEARTLPQKLAGTLGMLSKVMRIPRQQEVTALRTYLQIRIGLHAAFNACEEMCQRVALERQLDSEERALLIERSQTVIRQGRDLLHAWDATWNSAQALDNALQPDRAGQFADALEKYAAGLATALSRSPQITLEETPASQAILPTLLKQEQHVCQLFARLPDWTAPALTPATEQAQGATQ", + "protein_translation_length": 683, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4075" + ], + [ + "gene_synonym", + "GeneID:948598" + ], + [ + "gene_synonym", + "ASAP:ABE-0013373" + ], + [ + "gene_synonym", + "GI:16131908" + ], + [ + "gene_synonym", + "b4082" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32716" + ], + [ + "gene_synonym", + "yjcR" + ], + [ + "gene_synonym", + "sdsR" + ], + [ + "gene_synonym", + "NP_418506.1" + ], + [ + "gene_synonym", + "JW4043" + ], + [ + "gene_synonym", + "mdtN" + ], + [ + "gene_synonym", + "EcoGene:EG11954" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK4430" + ], + [ + "gene_synonym", + "YP_001165334.1" + ], + [ + "gene_synonym", + "ytcA" + ] + ], + "dna_sequence": "ATGCCAACAGTTCTCTCTCGCATGGCGATGCAACTCAAAAAAACAGCCTGGATAATTCCCGTCTTCATGGTTTCGGGATGCTCATTATCTCCGGCAATCCCGGTGATCGGCGCTTATTATCCCAGCTGGTTTTTCTGCGCCATTGCCAGCCTTATTTTGACGCTCATCACGAGGCGAGTTATTCAGCGGGCAAATATCAATCTGGCATTTGTCGGAATTATTTATACCGCCCTTTTTGCTCTCTACGCCATGCTGTTCTGGCTGGCATTTTTCTAA", + "dna_sequence_length": 276, + "functions": [ + "putative inner membrane efflux pump-associated DUF1656 family protein" + ], + "id": "CDS_4000", + "location": [ + [ + "NC_000913", + 4304403, + "-", + 276 + ] + ], + "md5": "e4bfdc6dc7e90ec9fda04d7ab1e2700d", + "parent_gene": "", + "protein_md5": "9abdad21bf235621e318ea6ded2a0321", + "protein_translation": "MPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWFFCAIASLILTLITRRVIQRANINLAFVGIIYTALFALYAMLFWLAFF", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013377" + ], + [ + "gene_synonym", + "ECK4076" + ], + [ + "gene_synonym", + "EcoGene:EG11955" + ], + [ + "gene_synonym", + "GI:90111684" + ], + [ + "gene_synonym", + "b4083" + ], + [ + "gene_synonym", + "GeneID:948597" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32717" + ], + [ + "gene_synonym", + "yjcS" + ], + [ + "gene_synonym", + "JW5721" + ], + [ + "gene_synonym", + "NP_418507.2" + ] + ], + "dna_sequence": 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"protein_translation_length": 661, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32718" + ], + [ + "gene_synonym", + "ECK4077" + ], + [ + "gene_synonym", + "ASAP:ABE-0013380" + ], + [ + "gene_synonym", + "GI:16131910" + ], + [ + "gene_synonym", + "EcoGene:EG11956" + ], + [ + "gene_synonym", + "GeneID:948596" + ], + [ + "gene_synonym", + "b4084" + ], + [ + "gene_synonym", + "yjcT" + ], + [ + "gene_synonym", + "alsK" + ], + [ + "gene_synonym", + "JW5724" + ], + [ + "gene_synonym", + "NP_418508.1" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK4080" + ], + [ + "gene_synonym", + "yjcW" + ], + [ + "gene_synonym", + "JW4048" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32721" + ], + [ + "gene_synonym", + "alsA" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:948608" + ], + [ + "gene_synonym", + "ECK4087" + ], + [ + "gene_synonym", + "NP_418518.1" + ], + [ + "gene_synonym", + "b4094" + ], + [ + "gene_synonym", + "EcoGene:EG10723" + ], + [ + "gene_synonym", + "GI:16131920" + ], + [ + "gene_synonym", + "JW4055" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16690" + ], + [ + "gene_synonym", + "phnN" + ], + [ + "gene_synonym", + "ASAP:ABE-0013417" + ] + ], + "dna_sequence": "ATGATGGGAAAACTGATTTGGTTAATGGGGCCGTCCGGCTCCGGGAAAGACAGCCTGCTGGCGGAACTCCGCCTGCGGGAACAAACTCAGTTACTGGTGGCGCATCGCTACATCACGCGCGATGCCAGCGCCGGAAGTGAAAACCATATCGCCCTGAGCGAGCAGGAGTTTTTTACCCGCGCGGGGCAAAATCTGTTGGCCTTAAGCTGGCACGCTAACGGTCTGTATTATGGCGTCGGCGTCGAGATTGATCTCTGGCTGCACGCCGGATTCGACGTGCTGGTCAACGGCTCACGCGCCCATCTGCCGCAGGCGCGGGCGCGCTATCAATCGGCGCTGCTGCCCGTCTGTTTACAGGTTTCGCCGGAGATCCTCCGCCAGCGCCTGGAAAACCGTGGCCGTGAAAACGCCAGTGAAATTAACGCCCGCCTGGCGCGCGCCGCCCGCTATACTCCACAGGATTGCCATACGCTCAACAATGACGGCAGCCTGCGCCAGTCGGTCGACACGCTGCTGACGCTGATCCATCAGAAGGAGAAACACCATGCCTGCTTGTGA", + "dna_sequence_length": 558, + "functions": [ + "ribose 1,5-bisphosphokinase" + ], + "id": "CDS_4012", + "location": [ + [ + "NC_000913", + 4316082, + "-", + 558 + ] + ], + "md5": "b120b3910efc6ed3b7d208e76b829386", + "parent_gene": "", + "protein_md5": "8e79cf4423fe4c80a00344ead74f5e9c", + "protein_translation": 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"EcoGene:EG10721" + ], + [ + "gene_synonym", + "b4096" + ], + [ + "gene_synonym", + "GI:16131922" + ], + [ + "gene_synonym", + "NP_418520.1" + ], + [ + "gene_synonym", + "phnL" + ], + [ + "gene_synonym", + "ASAP:ABE-0013421" + ] + ], + "dna_sequence": "ATGATTAACGTACAAAACGTCAGTAAAACCTTCATCCTGCACCAGCAAAACGGCGTGCGCCTGCCCGTCCTCAATCGCGCCTCGCTCACCGTCAACGCGGGCGAATGCGTGGTGCTCCACGGCCATTCCGGCAGCGGCAAATCAACTCTGCTACGCTCGCTGTACGCCAACTATCTGCCCGACGAAGGTCAAATCCAGATCAAACACGGTGACGAGTGGGTAGACCTGGTCACCGCGCCAGCGCGCAAAGTGGTGGAAATCCGCAAAACCACCGTCGGCTGGGTGAGCCAGTTTCTGCGCGTCATCCCGCGTATCTCAGCACTGGAAGTGGTGATGCAGCCGCTGCTCGATACCGGCGTTCCGCGTGAAGCCTGCGCCGCTAAAGCCGCGCGTCTTCTCACCCGCCTGAACGTGCCGGAACGCCTGTGGCACCTGGCACCATCGACATTTTCCGGTGGCGAACAGCAGCGCGTCAACATCGCCCGCGGCTTTATCGTCGACTACCCCATTCTGCTGCTTGACGAACCTACCGCCTCGCTGGACGCCAAAAACAGCGCCGCGGTGGTGGAACTGATTCGCGAAGCCAAAACCCGTGGCGCAGCCATCGTAGGCATCTTCCATGACGAAGCTGTACGTAATGACGTCGCCGACCGCCTGCACCCAATGGGAGCCTCTTCATGA", + "dna_sequence_length": 681, + "functions": [ + 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[ + "gene_synonym", + "GeneID:948621" + ], + [ + "gene_synonym", + "yjdM" + ], + [ + "gene_synonym", + "NP_418532.1" + ], + [ + "gene_synonym", + "ECK4101" + ], + [ + "gene_synonym", + "b4108" + ], + [ + "gene_synonym", + "GI:16131934" + ], + [ + "gene_synonym", + "EcoGene:EG10711" + ], + [ + "gene_synonym", + "phnA" + ], + [ + "gene_synonym", + "JW4069" + ], + [ + "gene_synonym", + "ASAP:ABE-0013451" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFJ1" + ] + ], + "dna_sequence": "ATGTCATTACCACACTGCCCAAAATGCAACTCCGAATACACCTACGAAGATAACGGCATGTACATCTGCCCGGAATGTGCCTACGAATGGAACGACGCAGAACCTGCACAGGAAAGCGACGAGCTGATCGTTAAAGATGCTAACGGCAATCTGCTGGCTGACGGCGACAGCGTTACCATCATTAAAGATCTGAAGGTGAAAGGTAGCTCTTCGATGCTGAAAATTGGCACCAAAGTGAAAAACATCCGCCTGGTTGAAGGCGACCATAACATCGATTGCAAAATCGACGGTTTTGGTCCGATGAAACTGAAATCTGAGTTTGTGAAAAAGAACTGA", + "dna_sequence_length": 336, + "functions": [ + "zinc-ribbon family protein" + ], + "id": "CDS_4025", + "location": [ + [ + "NC_000913", + 4326734, + "-", + 336 + ] + 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"TTGACCAAGACGTTACTTGACGGCCCCGGTCGCGTGCTGGAGTCGGTTTATCCCCGCTTTTTAGTGGATCTGGCGCAGGGTGATGATGCCCGCCTTCCACAAGCCCATCAGCAGCAGTTTCGTGAACGACTGATGCAGGAACTTCTTTCGCGTGTGCAGCTTCAGACATGGACGAACGGCGGCATGTTAAATGCGCCGCTTAGCCTGCGTCTGACATTGGTGGAAAAACTGGCGTCGATGCTGGATCCCGGTCATCTGGCACTGACGCAGATCGCGCAGCATCTGGCGCTGCTGCAAAAAATGGATCACCGCCAGCACTCTGCTTTCCCGGAGCTCCCCCAGCAAATTGCCGCCTTGTATGAGTGGTTTTCAGCCCGTTGTCGCTGGAAGGAAAAGGCGTTAACGCAACGAGGCCTACTGGTGCAGGCAGGTGATCAGAGCGAGCAAATTTTTACCCGCTGGCGTGCTGGGGCGTATAACGCCTGGTCGTTGCCTGGGCGCTGTTTTATCGTTCTGGAGGAGTTGCGCTGGGGGGCATTTGGCGATGCCTGCCGTCTGGGAAGCCCGCAAGCGGTGGCGTTGTTGCTGGGTGATTTGCTCGAGAAAGCGACACAACATCTGGCAGAGAGTATCAATGCGGCACCGACCACGCGTCACTATTACCATCAGTGGTTTGCCTCTTCGACCGTTCCGACGGGCGGGGAGCATGCTGATTTTTTAAGTTGGCTGGGAAAGTGGACCACGGCAGATAAACAACCCGTTTGCTGGTCAGTGACCCAACGCTGGCAAACTGTCGCGCTGGGGATGCCACGACTCTGTTCAGCGCAGCGTCTGGCGGGGGCAATGCTCGAGGAAATCTTCTCTGTAAATTTGGCGTAA", + "dna_sequence_length": 879, + "functions": [ + "YjcZ family protein", + "yhjH motility defect suppressor" + ], + 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"UniProtKB/Swiss-Prot:G3MTW7" + ], + [ + "gene_synonym", + "EcoGene:EG14499" + ], + [ + "gene_synonym", + "b4703" + ], + [ + "gene_synonym", + "GI:345452724" + ], + [ + "gene_synonym", + "ECK4515" + ], + [ + "gene_synonym", + "GeneID:11115379" + ], + [ + "gene_synonym", + "pmrR" + ] + ], + "dna_sequence": "ATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGA", + "dna_sequence_length": 90, + "functions": [ + "putative membrane-bound BasS regulator" + ], + "id": "CDS_4029", + "location": [ + [ + "NC_000913", + 4332116, + "+", + 90 + ] + ], + "md5": "e4486611a98bdbcf95fa61692e9a4166", + "parent_gene": "", + "protein_md5": "609abafe5334aa00f725dff12740eb57", + "protein_translation": "MKNRVYESLTTVFSVLVVSSFLYIWFATY", + "protein_translation_length": 29, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:948632" + ], + [ + "gene_synonym", + "basS" + ], + [ + "gene_synonym", + "ASAP:ABE-0013464" + ], + [ + "gene_synonym", + "ECK4105" + 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"GNAT family putative N-acetyltransferase" + ], + "id": "CDS_4045", + "location": [ + [ + "NC_000913", + 4352085, + "+", + 273 + ] + ], + "md5": "adcb6507c44b9e9d9aa7d79f3b5833e6", + "parent_gene": "", + "protein_md5": "2b5f1c1b38a8e69a6bcb5dce2d9bf6f2", + "protein_translation": "MEIREGHNKFYINDKQGKQIAEIVFVPTGENLAIIEHTDVDESLKGQGIGKQLVAKVVEKMRREKRKIIPLCPFAKHEFDKTREYDDIRS", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4121" + ], + [ + "gene_synonym", + "EcoGene:EG12468" + ], + [ + "gene_synonym", + "b4128" + ], + [ + "gene_synonym", + "GeneID:948646" + ], + [ + "gene_synonym", + "NP_418552.1" + ], + [ + "gene_synonym", + "JW4089" + ], + [ + "gene_synonym", + "GI:16131954" + ], + [ + "gene_synonym", + "yjdK" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF61" + ], + [ + "gene_synonym", + "ASAP:ABE-0013518" + ], + [ + "gene_synonym", + "ghoS" + ] + ], + "dna_sequence": 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"gene_synonym", + "yjdC" + ], + [ + "gene_synonym", + "cutA3" + ], + [ + "gene_synonym", + "ASAP:ABE-0013537" + ], + [ + "gene_synonym", + "JW5733" + ], + [ + "gene_synonym", + "GeneID:948650" + ] + ], + "dna_sequence": "GTGCAACGTGAAGATGTACTGGGAGAAGCCCTGAAATTATTAGAATTACAAGGGATTGCCAACACCACGCTGGAGATGGTTGCTGAACGTGTGGATTATCCACTGGACGAGCTACGCCGCTTCTGGCCAGACAAAGAGGCAATCCTCTACGATGCGCTGCGTTATCTTAGCCAACAGATAGATGTCTGGCGTCGTCAGCTGATGCTGGACGAAACGCAAACCGCCGAACAAAAGCTGCTGGCACGTTATCAGGCGTTATCGGAGTGCGTTAAAAACAACCGCTATCCGGGCTGTCTATTTATCGCTGCCTGTACGTTTTATCCCGATCCTGGCCACCCTATTCATCAACTGGCCGATCAGCAAAAAAGCGCGGCCTACGATTTCACCCACGAACTGTTAACCACACTGGAAGTTGACGATCCGGCGATGGTAGCAAAGCAGATGGAACTGGTGCTGGAAGGCTGTTTAAGCCGAATGCTGGTGAATCGTAGCCAGGCGGATGTCGACACTGCACATCGGCTGGCGGAAGATATCCTGCGCTTCGCCCGCTGCCGCCAGGGTGGTGCATTGACCTGA", + "dna_sequence_length": 576, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_4054", + "location": [ + [ + "NC_000913", + 4363308, + "-", + 576 + ] + ], + "md5": 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"gene_synonym", + "ECK4158" + ], + [ + "gene_synonym", + "orn" + ], + [ + "gene_synonym", + "ASAP:ABE-0013631" + ], + [ + "gene_synonym", + "GeneID:948675" + ], + [ + "gene_synonym", + "b4162" + ], + [ + "gene_synonym", + "JW5740" + ] + ], + "dna_sequence": "ATGAGTGCCAATGAAAACAACCTGATTTGGATCGATCTTGAGATGACCGGTCTGGATCCCGAGCGCGATCGCATTATTGAGATTGCCACGCTGGTGACCGATGCCAACCTGAATATTCTGGCAGAAGGGCCGACCATTGCAGTACACCAGTCTGATGAACAGCTGGCGCTGATGGATGACTGGAACGTGCGCACCCATACCGCCAGCGGGCTGGTAGAGCGCGTGAAAGCGAGCACGATGGGCGATCGGGAAGCTGAACTGGCAACGCTCGAATTTTTAAAACAGTGGGTGCCTGCGGGAAAATCGCCGATTTGCGGTAACAGCATCGGTCAGGACCGTCGTTTCCTGTTTAAATACATGCCGGAGCTGGAAGCCTACTTCCACTACCGTTATCTCGATGTCAGCACCCTGAAAGAGCTGGCGCGCCGCTGGAAGCCGGAAATTCTGGATGGTTTTACCAAGCAGGGGACGCATCAGGCGATGGATGATATCCGTGAATCGGTGGCGGAGCTGGCTTACTACCGCGAGCATTTTATCAAGCTGTAA", + "dna_sequence_length": 546, + "functions": [ + "oligoribonuclease" + ], + "id": "CDS_4083", + "location": [ + [ + "NC_000913", + 4391604, + "+", + 546 + ] + ], + "md5": 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"UniProtKB/Swiss-Prot:P31806" + ], + [ + "gene_synonym", + "NP_418588.1" + ], + [ + "gene_synonym", + "yjeF" + ], + [ + "gene_synonym", + "ASAP:ABE-0013644" + ], + [ + "gene_synonym", + "b4167" + ], + [ + "gene_synonym", + "ECK4163" + ], + [ + "gene_synonym", + "nnr" + ], + [ + "gene_synonym", + "GI:16131989" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW4128" + ], + [ + "gene_synonym", + "mutL" + ], + [ + "gene_synonym", + "GI:16131992" + ], + [ + "gene_synonym", + "EcoGene:EG11281" + ], + [ + "gene_synonym", + "ECK4166" + ], + [ + "gene_synonym", + "NP_418591.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0013655" + ] + ], + "dna_sequence": 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"CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:948690" + ], + [ + "gene_synonym", + "miaA" + ], + [ + "gene_synonym", + "NP_418592.1" + ], + [ + "gene_synonym", + "JW4129" + ], + [ + "gene_synonym", + "b4171" + ], + [ + "gene_synonym", + "GI:16131993" + ], + [ + "gene_synonym", + "ECK4167" + ], + [ + "gene_synonym", + "EcoGene:EG10595" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16384" + ], + [ + "gene_synonym", + "ASAP:ABE-0013657" + ], + [ + "gene_synonym", + "trpX" + ] + ], + "dna_sequence": 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[ + "delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase" + ], + "id": "CDS_4090", + "location": [ + [ + "NC_000913", + 4399252, + "+", + 951 + ] + ], + "md5": "0c70c58555c861eb296e8d868ffc88e2", + "parent_gene": "", + "protein_md5": "8e358f58a28e9ec776e56694d4714216", + "protein_translation": "MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIAG", + "protein_translation_length": 316, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW4130" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6X3" + ], + [ + "gene_synonym", + "hfq" + ], + [ + "gene_synonym", + "NP_418593.1" + ], + [ + "gene_synonym", + "GeneID:948689" + ], + [ + "gene_synonym", + "ASAP:ABE-0013659" + ], + [ + "gene_synonym", + "b4172" 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"GI:16132004" + ], + [ + "gene_synonym", + "EcoGene:EG12485" + ], + [ + "gene_synonym", + "GeneID:948703" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF78" + ], + [ + "gene_synonym", + "b4182" + ], + [ + "gene_synonym", + "ASAP:ABE-0013689" + ], + [ + "gene_synonym", + "ECK4178" + ], + [ + "gene_synonym", + "NP_418603.1" + ], + [ + "gene_synonym", + "JW4140" + ] + ], + "dna_sequence": "ATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAGCATATTCGTGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGAAATTAAGTCACGATAAGCTGAAAGATTTACGTGAGCGCAAAGCCAGTCTGGAAGCCCGTGCGCTGGAAGCGTTAAGCAAGAACGTTAATCCGTCGTTGATTAACGAAGTTGCTGAAGAAATCGCGCGCCTTGAGAATCTCATTACCGCTGAAGAGCAAGTGTTGTCGAATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAACGCCTGCAAACGCGTCAGGCCGAACGTCAGGCTCGCCTGGATGCTGCCGCACAGTTGGAGAAAGTCGCAGACGGTCGCGACCTTGACGAAAAGCTGGCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAA", + "dna_sequence_length": 699, + "functions": [ + "PspA/IM30 family protein" + ], + "id": "CDS_4101", + "location": [ + [ + "NC_000913", + 4410553, + "+", + 699 + ] + ], + "md5": "f10281a1296cbedc2d32ae00c5ff3039", + "parent_gene": "", + "protein_md5": "1a57bb4e9510d192b7cfdbeb63f0fd04", + "protein_translation": "MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDKAGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLENLITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTVGASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSSAQDVLARLQRQQGE", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "yjfK" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39293" + ], + [ + "gene_synonym", + "NP_418604.1" + ], + [ + "gene_synonym", + "GeneID:948702" + ], + [ + "gene_synonym", + "EcoGene:EG12486" + ], + [ + "gene_synonym", + "GI:16132005" + ], + [ + "gene_synonym", + "b4183" + ], + [ + "gene_synonym", + "ECK4179" + ], + [ + "gene_synonym", + "JW4141" + ], + [ + "gene_synonym", + "ASAP:ABE-0013692" + ] + ], + "dna_sequence": 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"MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDELLIALPGEEFTVAAVSHIDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYEESYGISKESHWREAINAKAMGAMTLNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNHAKWEVHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHIIG", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_418605.1" + ], + [ + "gene_synonym", + "yjfL" + ], + [ + "gene_synonym", + "GI:16132006" + ], + [ + "gene_synonym", + "EcoGene:EG12487" + ], + [ + "gene_synonym", + "GeneID:948701" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF80" + ], + [ + "gene_synonym", + "JW4142" + ], + [ + "gene_synonym", + "ECK4180" + ], + [ + "gene_synonym", + "b4184" + ], + [ + "gene_synonym", + "ASAP:ABE-0013694" + ] + ], + "dna_sequence": "ATGCATATACTGGATTCACTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGATTCAGTTACTCGTTTTTGCTGGTGTCAGACTTTATATGCCCGCATTAAGCGAAAAAATTATTAATCACAATACCGCAGCAGGAATGTTTATGGGAACCGCCGCGCTGGCTGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAA", + "dna_sequence_length": 399, + "functions": [ + "UPF0719 family inner membrane protein" + ], + "id": "CDS_4103", + "location": [ + [ + "NC_000913", + 4411979, + "+", + 399 + ] + ], + "md5": "47623a4e7271481bbcff2f3f58342b41", + "parent_gene": "", + "protein_md5": "9aa45ee7f805e22a5ebb8154609c2108", + "protein_translation": "MHILDSLLAFSAYFFIGVAMVIIFLFIYSKITPHNEWQLIKNNNTAASLAFSGTLLGYVIPLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSEKIINHNTAAGMFMGTAALAGGIFNAACMTW", + "protein_translation_length": 132, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39295" + ], 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"MARKRKSRNNSKIGHGAISRIGRPNNPFEPCRNRYAQKYLTLALMGGAAFFVLKGCSDSSDVDNDGDGTFYATVQDCIDDGNNADICARGWNNAKTAFYADVPKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRPVWRSTSGDYSWRSGSGKKESYSSGGFTTKKASTVSRGGYGRSSSARGHWGG", + "protein_translation_length": 212, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GI:16132008" + ], + [ + "gene_synonym", + "GeneID:948699" + ], + [ + "gene_synonym", + "yjfC" + ], + [ + "gene_synonym", + "NP_418607.1" + ], + [ + "gene_synonym", + "JW4144" + ], + [ + "gene_synonym", + "b4186" + ], + [ + "gene_synonym", + "ASAP:ABE-0013698" + ], + [ + "gene_synonym", + "ECK4182" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33222" + ], + [ + "gene_synonym", + "EcoGene:EG11812" + ] + ], + "dna_sequence": "ATGCTGAGACACAACGTTCCTGTGCGACGGGATCTGGACCAGATCGCCGCTGACAACGGTTTCGACTTTCATATCATCGACAATGAAATCTATTGGGATGAGAGTCGGGCTTACCGTTTTACTCTGCGCCAGATTGAAGAGCAGATCGAAAAACCGACTGCGGAACTGCATCAGATGTGCCTTGAGGTGGTGGATCGCGCGGTAAAAGATGAAGAGATCCTGACGCAACTGGCGATCCCGCCGTTGTACTGGGATGTGATCGCTGAAAGCTGGCGCGCCCGCGATCCTTCGCTGTATGGACGGATGGATTTTGCCTGGTGTGGCAATGCGCCGGTGAAGCTGCTGGAGTACAACGCCGATACGCCAACTTCATTGTACGAGTCGGCTTATTTCCAGTGGCTGTGGCTGGAGGATGCCCGGCGCAGCGGCATTATTCCGCGTGATGCCGATCAGTACAATGCTATTCAGGAACGCCTGATTTCACGCTTTAGCGAGCTTTACAGTCGGGAACCGTTTTATTTTTGCTGCTGTCAGGACACCGATGAAGACAGGAGTACCGTGCTGTACTTGCAGGACTGCGCCCAGCAGGCAGGGCAGGAGTCGCGGTTTATCTACATTGAAGATCTCGGTTTGGGCGTCGGCGGCGTACTGACCGATCTTGATGATAATGTCATCCAGCGTGCATTTAAGCTGTATCCGCTGGAGTGGATGATGCGTGACGATAACGGTCCGCTGCTGCGCAAGCGTCGCGAGCAATGGGTGGAGCCGTTATGGAAAAGTATCTTGAGTAATAAAGGGCTAATGCCGCTGCTTTGGCGCTTCTTCCCTGGTCATCCTAATCTTCTTGCGTCCTGGTTCGATGGCGAGAAACCGCAGATTGCCGCTGGCGAAAGCTATGTGCGTAAACCAATCTATTCGCGCGAAGGCGGCAACGTCACCATTTTTGACGGCAAGAATAACGTTGTTGACCACGCTGATGGTGATTACGCCGATGAACCGATGATCTACCAGGCGTTTCAACCTCTGCCGCGGTTTGGCGATAGCTACACACTCATCGGTAGCTGGATTGTCGATGATGAAGCGTGCGGAATGGGGATCCGTGAAGATAACACACTGATCACCAAAGACACCTCACGTTTCGTTCCGCATTACATTGCTGGATAA", 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"gene_synonym", + "b4187" + ], + [ + "gene_synonym", + "ECK4183" + ], + [ + "gene_synonym", + "EcoGene:EG11811" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33224" + ], + [ + "gene_synonym", + "NP_418608.6" + ] + ], + "dna_sequence": "GTGCACTGGCAAACTCACACCGTTTTTAATCAACCTATACCATTAAATAACAGCAACTTATACCTGTCTGATGGCGCGCTCTGCGAAGCGGTAACGCGTGAAGGTGCTGGCTGGGATAGCGATTTTCTAGCCAGTATTGGTCAGCAGTTAGGAACGGCTGAATCCCTTGAACTGGGGCGGCTGGCGAATGTGAATCCGCCTGAATTATTGCGCTACGATGCGCAAGGACGCCGTCTGGACGATGTGCGTTTTCACCCCGCCTGGCACCTGCTGATGCAGGCGCTATGTACCAATCGGGTGCACAATCTTGCCTGGGAAGAAGACGCTCGCTCCGGCGCATTTGTGGCGCGCGCGGCGCGTTTTATGTTACATGCGCAGGTTGAGGCAGGGTCGTTATGTCCGATAACCATGACCTTTGCCGCCACGCCATTGTTGTTACAGATGTTACCCGCGCCGTTTCAGGACTGGACCACGCCGCTATTGAGCGATCGCTACGATTCTCACTTATTGCCAGGTGGGCAAAAACGCGGTTTGTTGATTGGCATGGGAATGACGGAAAAGCAGGGCGGTTCCGATGTTATGAGCAACACCACCCGTGCAGAGCGTCTGGAAGATGGCTCTTATCGGCTGGTGGGGCATAAATGGTTTTTCTCGGTTCCGCAAAGCGATGCGCATCTGGTGCTGGCGCAGACCGCGGGTGGTCTGTCCTGCTTTTTTGTGCCGCGCTTTTTGCCTGACGGGCAACGCAACGCGATTCGCCTCGAGCGGCTGAAAGATAAGCTGGGTAATCGCTCTAACGCCAGTTGCGAAGTGGAGTTTCAGGATGCCATTGGTTGGTTGTTGGGGCTGGAAGGGGAAGGAATTCGTCTGATCCTGAAAATGGGTGGGATGACGCGTTTTGATTGCGCCCTGGGTAGCCATGCCATGATGCGCCGTGCATTTTCGCTGGCGATTTATCATGCACATCAACGCCATGTTTTTGGTAATCCATTGATCCAACAGCCCCTTATGCGTCATGTCTTAAGTCGCATGGCACTTCAGCTTGAAGGGCAAACGGCGTTGCTGTTTCGTCTTGCGCGAGCGTGGGACCGGCGTGCCGATGCCAAAGAAGCCCTGTGGGCGCGTTTATTTACGCCTGCGGCAAAATTTGTGATCTGCAAAAGAGGTATGCCGTTTGTGGCCGAAGCGATGGAGGTGCTGGGCGGCATTGGTTATTGCGAGGAGAGTGAGCTGCCGCGGCTTTACCGGGAGATGCCGGTAAACAGTATTTGGGAAGGTTCCGGCAATATTATGTGCCTGGATGTGTTGCGCGTTCTCAATAAGCAAGCGGGCGTATACGACTTATTGTCGGAAGCATTTGTGGAAGTGAAAGGGCAGGATCGCTATTTTGATCGCGCGGTTCGTCGTTTACAGCAGCAGCTGCGTAAGCCAGCTGAAGAACTGGGGCGAGAGATTACTCATCAGCTATTCCTGCTGGGCTGCGGTGCGCAAATGTTGAAATATGCTTCTCCGCCAATGGCGCAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAA", 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"MAYRDQPLGELALSIPRASALFRKYDMDYCCGGKQTLARAAARKELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPSVPKGLTKYLTMLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEHDEAGELLEVIKHTTNNVTPPPEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALAGE", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4206" + ], + [ + "gene_synonym", + "b4210" + ], + [ + "gene_synonym", + "EcoGene:EG12506" + ], + [ + "gene_synonym", + "GeneID:948732" + ], + [ + "gene_synonym", + "ytfF" + ], + [ + "gene_synonym", + "ASAP:ABE-0013769" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39314" + ], + [ + "gene_synonym", + "JW4168" + ], + [ + "gene_synonym", + "GI:226524763" + ], + [ + "gene_synonym", + "NP_418631.2" + ] + ], + "dna_sequence": 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"ATGATCGCTATTACTGGTGCCACTGGCCAACTTGGTCACTATGTTATTGAATCCTTGATGAAAACGGTTCCTGCCAGCCAAATAGTGGCTATCGTTCGTAATCCGGCAAAAGCCCAAGCCCTGGCAGCACAAGGCATTACCGTGCGTCAGGCTGACTACGGCGATGAAGCCGCACTGACATCTGCACTTCAGGGAGTGGAAAAACTACTGCTGATCTCTTCCAGCGAAGTGGGTCAACGTGCCCCGCAGCATCGTAATGTTATTAATGCCGCAAAGGCGGCTGGCGTGAAATTTATCGCTTATACCAGCCTGCTACATGCAGATACCTCCCCGCTCGGCCTCGCCGATGAGCACATCGAGACGGAGAAAATGCTGGCTGATTCTGGCATCGTTTACACCCTGCTGCGCAACGGCTGGTACAGCGAAAACTACCTCGCCAGCGCCCCGGCAGCACTGGAACACGGCGTATTTATCGGTGCGGCGGGCGATGGCAAAATCGCCTCAGCAACGCGGGCAGATTATGCGGCAGCTGCGGCACGCGTGATTAGCGAAGCCGGTCACGAAGGCAAGGTTTACGAACTGGCGGGCGATAGTGCCTGGACGTTGACACAGTTAGCGGCAGAGCTGACCAAACAGAGCGGCAAACAGGTTACCTATCAAAATCTGAGCGAAGCCGATTTCGCCGCGGCACTGAAAAGCGTCGGACTGCCCGACGGACTGGCGGATATGCTGGCGGATTCTGACGTTGGCGCATCGAAAGGCGGTCTGTTTGATGACAGCAAAACACTTAGCAAATTGATTGGCCACCCAACGACAACGTTAGCCGAAAGCGTAAGCCATCTTTTTAATGTTAATAACTAG", + "dna_sequence_length": 861, + "functions": [ + "NAD(P)H:quinone oxidoreductase" + ], + "id": "CDS_4130", + "location": [ + [ + "NC_000913", + 4434024, + "-", + 861 + ] + ], + "md5": "560e7a864648ce094e2a25644de9ea80", + "parent_gene": "", + "protein_md5": "49d6a9721b414222d55df6076d44f5eb", + "protein_translation": "MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTTTLAESVSHLFNVNN", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b4212" + ], + [ + "gene_synonym", + "GeneID:948730" + ], + [ + "gene_synonym", + "EcoGene:EG12508" + ], + [ + "gene_synonym", + "NP_418633.4" + ], + [ + "gene_synonym", + "ECK4208" + ], + [ + "gene_synonym", + "ASAP:ABE-0013777" + ], + [ + "gene_synonym", + "GI:90111706" + ], + [ + "gene_synonym", + "JW5747" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACN2" + ], + [ + "gene_synonym", + "ytfH" + ] + ], + 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"gene_synonym", + "UniProtKB/Swiss-Prot:P08331" + ], + [ + "gene_synonym", + "cpdB" + ], + [ + "gene_synonym", + "ECK4209" + ], + [ + "gene_synonym", + "ASAP:ABE-0013782" + ], + [ + "gene_synonym", + "GI:16132035" + ], + [ + "gene_synonym", + "EcoGene:EG10160" + ], + [ + "gene_synonym", + "GeneID:948729" + ], + [ + "gene_synonym", + "JW4171" + ], + [ + "gene_synonym", + "NP_418634.1" + ] + ], + "dna_sequence": 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"uncharacterized protein" + ], + "id": "CDS_4134", + "location": [ + [ + "NC_000913", + 4437707, + "+", + 939 + ] + ], + "md5": "5c786bd88e5ee49a9f54a8af5de78c42", + "parent_gene": "", + "protein_md5": "f6148e0cc56bc9efbb6c5f5ea5cd2a4c", + "protein_translation": "MLPRIRHNNFIGAVELFVKSSYTKTHSNNFFNNIHHAFKKKDWISNYDSLLTLREFFRCATQIDKSGYQVLSSKNETVHAMDKFLISFSLKDNGAEYTMTLRGSGFEYEEIPITINEYNSFMDFKNREFPLEQNRRLYAWDILQKKQSDIPKRIKGYIHQAIGDVSLGYALLEDIVSKLKRGKFELQIPGGGIKECDGWYIYEKIIDDNFAIVIESLGFALKIYGGDERFRNGSSVVLEDEDYSLIYNFLVNAGCQQVELAEQVDAIVSANLAADSDITKEKICEKYKSTIEAFKKEQLALPVLVRRKNSET", + "protein_translation_length": 312, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_418637.1" + ], + [ + "gene_synonym", + "b4216" + ], + [ + "gene_synonym", + "ecfJ" + ], + [ + "gene_synonym", + "GI:16132038" + ], + [ + "gene_synonym", + "EcoGene:EG12510" + ], + [ + "gene_synonym", + "GeneID:948737" + ], + [ + "gene_synonym", + "ASAP:ABE-0013792" + ], + [ + "gene_synonym", + "JW4175" + ], + [ + "gene_synonym", + "ECK4212" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39187" + ], + [ + "gene_synonym", + "ytfJ" + ] + ], + "dna_sequence": "ATGACCCTACGCAAGATTCTGGCACTCACCTGCCTGCTGTTGCCGATGATGGCTTCCGCACATCAGTTCGAAACCGGTCAGCGAGTGCCGCCGATTGGCATTACCGATCGGGGCGAGTTGGTGCTTGATAAAGATCAGTTTAGCTACAAAACCTGGAACAGCGCGCAGTTAGTGGGAAAAGTGCGAGTACTGCAACATATTGCTGGTCGCACCTCTGCAAAAGAGAAAAACGCGACGCTGATTGAAGCGATTAAATCAGCGAAGTTACCGCACGATCGTTACCAGACCACCACCATTGTTAACACCGACGACGCGATTCCGGGTTCAGGGATGTTTGTGCGCAGCAGTCTGGAGAGTAATAAAAAGCTTTATCCCTGGTCGCAGTTTATTGTCGATAGCAATGGCGTCGCGCTCGGTGCCTGGCAGCTGGATGAAGAAAGTTCCGCTGTAGTGGTGCTGGATAAGGATGGTCGCGTGCAATGGGCCAAAGACGGGGCGCTCACACCGGAAGAGGTGCAGCAAGTGATGGACCTGCTGCAAAAGTTGCTCAAATAA", + "dna_sequence_length": 555, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_4135", + "location": [ + [ + "NC_000913", + 4439262, + "-", + 555 + ] + ], + "md5": "a637e28ba001284285ef70eda9a6f162", + "parent_gene": "", + "protein_md5": "f8eb7acc179b506e41e4e914ad78684f", + "protein_translation": "MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVALGAWQLDEESSAVVVLDKDGRVQWAKDGALTPEEVQQVMDLLQKLLK", + "protein_translation_length": 184, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_418638.2" + ], + [ + "gene_synonym", + "b4217" + ], + [ + "gene_synonym", + "ASAP:ABE-0013797" + ], + [ + "gene_synonym", + "EcoGene:EG12511" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADE2" + ], + [ + "gene_synonym", + "GeneID:948736" + ], + [ + "gene_synonym", + "JW5749" + ], + [ + "gene_synonym", + "GI:90111707" + ], + [ + "gene_synonym", + "ECK4213" + ], + [ + "gene_synonym", + "ytfK" + ] + ], + "dna_sequence": "ATGAAAATTTTCCAACGGTACAACCCACTTCAGGTGGCGAAGTACGTAAAGATCCTGTTCCGTGGACGGTTATACATCAAGGACGTTGGCGCTTTTGAATTCGATAAGGGTAAGATTCTTATCCCAAAAGTGAAGGATAAGCTGCATTTGTCAGTGATGTCCGAAGTTAACCGTCAGGTTATGCGTCTGCAAACAGAGATGGCTTAA", + "dna_sequence_length": 207, + "functions": [ + "DUF1107 family protein" + ], + "id": "CDS_4136", + "location": [ + [ + "NC_000913", + 4439587, + "+", + 207 + ] + ], + "md5": "6a0a73b2a7d78259c4e9b812ab561e3c", + "parent_gene": "", + "protein_md5": "6368f0cdf1a01dc384e1c2397a7d71e6", + "protein_translation": "MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKVKDKLHLSVMSEVNRQVMRLQTEMA", + "protein_translation_length": 68, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_418639.1" + ], + [ + "gene_synonym", + "b4218" + ], + [ + "gene_synonym", + "EcoGene:EG12512" + ], + [ + "gene_synonym", + "GI:16132040" + ], + [ + "gene_synonym", + "GeneID:948735" + ], + [ + "gene_synonym", + "ASAP:ABE-0013799" + ], + [ + "gene_synonym", + "JW4177" + ], + [ + "gene_synonym", + "ytfL" + ], + [ + "gene_synonym", + "ECK4214" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE45" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG11433" + ], + [ + "gene_synonym", + "msrA" + ], + [ + "gene_synonym", + "GeneID:948734" + ], + [ + "gene_synonym", + "GI:16132041" + ], + [ + "gene_synonym", + "NP_418640.1" + ], + [ + "gene_synonym", + "JW4178" + ], + [ + "gene_synonym", + "ASAP:ABE-0013804" + ], + [ + "gene_synonym", + "pmsR" + ], + [ + "gene_synonym", + "ECK4215" + ] + ], + "dna_sequence": 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"functions": [ + "galactofuranose ABC transporter periplasmic binding protein" + ], + "id": "CDS_4145", + "location": [ + [ + "NC_000913", + 4449962, + "+", + 957 + ] + ], + "md5": "9fbc7fd5292ea8fd9b07d184c3688ba2", + "parent_gene": "", + "protein_md5": "9e2aad1c75e88a3db508aa845635d7b7", + "protein_translation": "MWKRLLIVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGKDILTGSIDGVPDIYKAMMDGEANASVELTPNMAGPAFDALEKYKKDGTMPEKLTLTKSTLYLPDTAKEELEKKKNMGY", + "protein_translation_length": 318, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG12518" + ], + [ + "gene_synonym", + "GI:49176475" + ], + [ + "gene_synonym", + "ytfS" + ], + [ + "gene_synonym", + "ytfR" + ], + [ + "gene_synonym", + "b4485" + ], + [ + "gene_synonym", + "GeneID:2847725" + ], + [ + "gene_synonym", + "JW5752" + ], + [ + "gene_synonym", + "ECK4224" + ], + [ + "gene_synonym", + "YP_026286.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q6BEX0" + ], + [ + "gene_synonym", + "ASAP:ABE-0174118" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:948743" + ], + [ + "gene_synonym", + "b4230" + ], + [ + "gene_synonym", + "EcoGene:EG12520" + ], + [ + "gene_synonym", + "ASAP:ABE-0013838" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39328" + ], + [ + "gene_synonym", + "JW5753" + ], + [ + "gene_synonym", + "ECK4225" + ], + [ + "gene_synonym", + "GI:145698343" + ] + ], + "dna_sequence": 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"ASAP:ABE-0013840" + ], + [ + "gene_synonym", + "GI:90111710" + ], + [ + "gene_synonym", + "JW5754" + ], + [ + "gene_synonym", + "ECK4226" + ], + [ + "gene_synonym", + "NP_418652.2" + ] + ], + "dna_sequence": 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"gene_synonym", + "fdp" + ], + [ + "gene_synonym", + "NP_418653.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A993" + ], + [ + "gene_synonym", + "GI:16132054" + ], + [ + "gene_synonym", + "ECK4227" + ] + ], + "dna_sequence": 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"gene_synonym", + "yjfG" + ], + [ + "gene_synonym", + "JW4192" + ], + [ + "gene_synonym", + "ECK4228" + ], + [ + "gene_synonym", + "ASAP:ABE-0013847" + ], + [ + "gene_synonym", + "GI:16132055" + ], + [ + "gene_synonym", + "EcoGene:EG12440" + ] + ], + "dna_sequence": 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"gene_synonym", + "UniProtKB/Swiss-Prot:P0A8X0" + ], + [ + "gene_synonym", + "NP_418655.1" + ], + [ + "gene_synonym", + "JW4193" + ], + [ + "gene_synonym", + "ASAP:ABE-0013850" + ], + [ + "gene_synonym", + "EcoGene:EG11410" + ], + [ + "gene_synonym", + "ECK4229" + ], + [ + "gene_synonym", + "b4234" + ], + [ + "gene_synonym", + "GI:16132056" + ] + ], + "dna_sequence": "ATGACTAAGCAGCCCGAAGACTGGCTCGACGACGTTCCCGGTGATGACATCGAAGACGAAGACGATGAAATTATCTGGGTCAGTAAAAGTGAAATTAAACGTGATGCCGAGGAGCTAAAACGCCTTGGCGCGGAAATTGTTGATCTGGGGAAAAACGCGCTGGATAAGATCCCGTTAGATGCGGATCTGCGCGCGGCTATTGAGCTCGCCCAGCGTATTAAGATGGAAGGTCGCCGCCGCCAGTTGCAGCTCATCGGTAAGATGCTGCGCCAGCGCGACGTAGAGCCTATTCGTCAGGCGCTGGATAAGCTGAAAAACCGTCACAACCAGCAGGTGGTGCTGTTCCATAAACTGGAAAACCTGCGCGATCGTCTGATCGATCAAGGTGATGACGCCATCGCTGAGGTATTAAATCTGTGGCCCGATGCCGATCGTCAGCAACTGCGTACTCTGATCCGCAACGCGAAGAAAGAGAAAGAAGGGAATAAGCCGCCGAAATCCGCACGCCAGATTTTCCAGTATCTGCGCGAGTTAGCGGAGAACGAAGGGTAA", + "dna_sequence_length": 552, + "functions": [ + "ribosome-associated UPF0307 family protein" + ], + "id": "CDS_4151", + "location": [ + [ + "NC_000913", + 4457865, + "-", + 552 + ] + ], + "md5": "e1f9c6ee32ac4e4f2fe655f39d3a9b7c", + "parent_gene": "", + "protein_md5": "9718f16e2e82da45c9a8064a1edf0d72", + "protein_translation": "MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGAEIVDLGKNALDKIPLDADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALDKLKNRHNQQVVLFHKLENLRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKEGNKPPKSARQIFQYLRELAENEG", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:948750" + ], + [ + "gene_synonym", + "EcoGene:EG10741" + ], + [ + "gene_synonym", + "b4235" + ], + [ + "gene_synonym", + "mcb" + ], + [ + "gene_synonym", + "GI:16132057" + ], + [ + "gene_synonym", + "JW4194" + ], + [ + "gene_synonym", + "ASAP:ABE-0013854" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFK0" + ], + [ + "gene_synonym", + "pmbA" + ], + [ + "gene_synonym", + "NP_418656.1" + ], + [ + "gene_synonym", + "tldE" + ], + [ + "gene_synonym", + "ECK4230" + ] + ], + "dna_sequence": 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"gene_synonym", + "b4236" + ], + [ + "gene_synonym", + "cybC" + ], + [ + "gene_synonym", + "JW4195" + ], + [ + "gene_synonym", + "EcoGene:EG50008" + ], + [ + "gene_synonym", + "ASAP:ABE-0013858" + ], + [ + "gene_synonym", + "ECK4231" + ] + ], + "dna_sequence": "ATTCTTGCAGTCTCCTCGTTGGTATTCAGTTCGGCGTCATTTGCTGCTGATCTCGAAGACAATATGGAAACCCTCAACGACAATTTAAAAGTGGTCGAAAAAGCCGATAACGCGGCGCAAGTCAAAGACGCGTTAACGAAGATGCGCGCCGCAGCGCTGGATGCGCAAAAAGCAACGCCGCCGAAGCTCGAAGATAAATCACCGGACAGCCCGGAAATGAAAGATTTCCGCCACGGTTTCGACATTCTGGTCGGTCAGATTGACGACGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAA", + "dna_sequence_length": 366, + "id": "CDS_4153", + "location": [ + [ + "NC_000913", + 4459490, + "+", + 366 + ] + ], + "md5": "9256a449cbac338ecc7401d03d7697d7", + "parent_gene": "", + "protein_md5": "a00cd79ee0d295ab2d760b6670fea22a", + "protein_translation": "ILAVSSLVFSSASFAADLEDNMETLNDNLKVVEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNSYHKKYR", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "nrdG" + ], + [ + "gene_synonym", + "EcoGene:EG12523" + ], + [ + "gene_synonym", + "GeneID:948757" + ], + [ + "gene_synonym", + "yjgE" + ], + [ + "gene_synonym", + "b4237" + ], + [ + "gene_synonym", + "GI:16132059" + ], + [ + "gene_synonym", + "NP_418658.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0013860" + ], + [ + "gene_synonym", + "JW4196" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9N8" + ], + [ + "gene_synonym", + "ECK4232" + ] + ], + "dna_sequence": "ATGAATTATCATCAGTACTATCCTGTCGACATCGTCAACGGCCCCGGCACTCGTTGCACCCTGTTTGTCTCCGGGTGTGTTCATGAATGCCCCGGTTGCTATAACAAAAGCACATGGCGGGTAAATTCCGGTCAGCCATTTACCAAAGCAATGGAAGACCAGATCATTAACGATCTGAATGACACTCGTATCAAACGCCAGGGTATTTCCCTCTCCGGCGGCGATCCGCTGCATCCGCAAAACGTGCCGGATATTCTGAAACTGGTACAACGCATCCGCGCCGAGTGTCCGGGTAAAGACATCTGGGTGTGGACAGGCTATAAACTCGACGAACTCAACGCTGCGCAAATGCAGGTTGTTGATTTGATTAACGTGCTGGTCGACGGCAAATTTGTGCAGGATTTAAAAGACCCTTCCCTGATCTGGCGCGGCAGCAGCAATCAGGTGGTGCATCATTTGCGATGA", + "dna_sequence_length": 465, + "functions": [ + "anaerobic ribonucleotide reductase activating protein" + ], + "id": "CDS_4154", + "location": [ + [ + "NC_000913", + 4460364, + "-", + 465 + ] + ], + "md5": "6f3fb4ee8686a9bcf76c6d2a8af48455", + "parent_gene": "", + "protein_md5": "f0d1233ca95f743a927fe329d7424072", + "protein_translation": "MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSGQPFTKAMEDQIINDLNDTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIWVWTGYKLDELNAAQMQVVDLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR", + "protein_translation_length": 154, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b4238" + ], + [ + "gene_synonym", + "nrdD" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28903" + ], + [ + "gene_synonym", + "EcoGene:EG11417" + ], + [ + "gene_synonym", + "NP_418659.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0013865" + ], + [ + "gene_synonym", + "JW4197" + ], + [ + "gene_synonym", + "GI:16132060" + ], + [ + "gene_synonym", + "ECK4233" + ], + [ + "gene_synonym", + "GeneID:948755" + ] + ], + "dna_sequence": 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"MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG", + "protein_translation_length": 712, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "olgH" + ], + [ + "gene_synonym", + "b4239" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28904" + ], + [ + "gene_synonym", + "treC" + ], + [ + "gene_synonym", + "GeneID:948762" 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"ATGACTCATCTTCCCCACTGGTGGCAAAACGGCGTTATCTACCAGATTTATCCAAAGAGTTTTCAGGACACCACGGGTAGCGGTACCGGCGATTTACGTGGCGTTATCCAACACCTGGACTATCTGCATAAACTGGGCGTTGATGCCATCTGGCTAACCCCCTTTTATGTCTCTCCCCAGGTCGATAACGGTTACGACGTAGCGAACTATACGGCGATTGATCCCACCTACGGCACGCTGGACGATTTTGACGAACTGGTGACGCAGGCAAAATCGCGCGGGATTCGTATCATTCTCGATATGGTGTTTAACCATACCTCTACCCAACATGCCTGGTTTCGCGAGGCGCTGAACAAAGAAAGCCCTTACCGCCAGTTTTATATCTGGCGCGATGGAGAACCAGAAACGCCACCGAACAACTGGCGTTCAAAATTTGGCGGTAGTGCGTGGCGCTGGCATGCGGAAAGCGAACAGTACTATTTGCATCTCTTTGCACCAGAACAGGCGGATCTCAACTGGGAGAATCCAGCGGTACGCGCAGAGCTGAAAAAAGTCTGTGAGTTCTGGGCCGATCGTGGGGTCGACGGGTTGCGCCTGGATGTGGTGAATCTGATCTCCAAAGACCCGCGTTTCCCTGAAGACCTGGACGGCGACGGGCGTCGCTTCTACACCGACGGGCCACGAGCACACGAGTTTTTGCACGAGATGAACCGCGATGTGTTTACGCCACGCGGGTTAATGACCGTAGGTGAAATGTCCTCCACCAGCCTTGAGCATTGCCAGCGATACGCGGCTCTGACAGGCAGTGAATTGTCGATGACCTTTAATTTTCATCACCTGAAGGTCGATTATCCCGGTGGTGAAAAATGGACGCTGGCTAAACCTGACTTTGTGGCGTTGAAAACATTGTTCCGCCACTGGCAACAAGGAATGCACAACGTAGCATGGAATGCCTTGTTCTGGTGTAACCACGATCAGCCGCGCATTGTTTCTCGCTTTGGTGATGAAGGTGAATACCGCGTGCCTGCGGCAAAAATGCTGGCGATGGTGCTGCATGGCATGCAGGGAACGCCGTATATCTACCAGGGCGAAGAGATTGGCATGACCAACCCGCATTTCACGCGCATTACTGACTATCGCGACGTAGAGAGCCTCAATATGTTTGCCGAGCTGCGCAACGATGGGCGTGATGCCGACGAGTTATTGGCAATCCTCGCCAGTAAATCCCGTGACAACAGTCGCACGCCCATGCAATGGAGCAACGGCGATAATGCCGGGTTTACGGCTGGCGAACCGTGGATTGGCCTGGGCGATAACTATCAACAAATCAACGTAGAAGCCGCGCTGGCCGATGATTCCTCGGTGTTTTACACCTACCAAAAGTTAATCGCACTGCGTAAGCAGGAAGCCATCCTGACATGGGGCAATTACCAGGATCTGCTGCCAAACAGCCCTGTATTGTGGTGCTATCGCCGTGAATGGAAGGGGCAAACCTTGCTGGTCATTGCCAACCTTAGCCGTGAGATCCAACCCTGGCAGGCAGGGCAAATGCGCGGCAACTGGCAGCTTGTGATGCATAACTACGAAGAAGCCTCACCACAACCCTGTGCCATGAATTTACGGCCTTTTGAGGCTGTCTGGTGGTTACAGAAGTAA", 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"gene_synonym", + "NP_418661.1" + ], + [ + "gene_synonym", + "GeneID:948761" + ], + [ + "gene_synonym", + "treB" + ], + [ + "gene_synonym", + "b4240" + ], + [ + "gene_synonym", + "JW4199" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36672" + ], + [ + "gene_synonym", + "ECK4235" + ], + [ + "gene_synonym", + "ASAP:ABE-0013872" + ], + [ + "gene_synonym", + "GI:16132062" + ] + ], + "dna_sequence": 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"trehalose 6-phosphate-inducible trehalose regulon transcriptional repressor" + ], + "id": "CDS_4158", + "location": [ + [ + "NC_000913", + 4467246, + "-", + 948 + ] + ], + "md5": "966375c6e667f57330e056120b2da398", + "parent_gene": "", + "protein_md5": "4bc4e2950a34015dc197c68f8d50b94b", + "protein_translation": "MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQLTRERVEAVMNQHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCATDTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVTGRSEPQQIIIPATLS", + "protein_translation_length": 315, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "EcoGene:EG14498" + ], + [ + "gene_synonym", + "GeneID:9797237" + ], + [ + "gene_synonym", + "GI:308209623" + ], + [ + "gene_synonym", + "YP_003933616.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:E2JKY7" + ], + [ + "gene_synonym", + "b4702" + ], + [ + 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"type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "NP_418680.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28905" + ], + [ + "gene_synonym", + "b4259" + ], + [ + "gene_synonym", + "GeneID:948787" + ], + [ + "gene_synonym", + "ECK4252" + ], + [ + "gene_synonym", + "ASAP:ABE-0013948" + ], + [ + "gene_synonym", + "JW4216" + ], + [ + "gene_synonym", + "GI:16132081" + ], + [ + "gene_synonym", + "holC" + ], + [ + "gene_synonym", + "EcoGene:EG11413" + ] + ], + "dna_sequence": "ATGAAAAACGCGACGTTCTACCTTCTGGACAATGACACCACCGTCGATGGCTTAAGCGCCGTTGAGCAACTGGTGTGTGAAATTGCCGCAGAACGTTGGCGCAGCGGTAAGCGCGTGCTCATCGCCTGTGAAGATGAAAAGCAGGCTTACCGGCTGGATGAAGCCCTGTGGGCGCGTCCGGCAGAAAGCTTTGTTCCGCATAATTTAGCGGGAGAAGGACCGCGCGGCGGTGCACCGGTGGAGATCGCCTGGCCGCAAAAGCGTAGCAGCAGCCGGCGCGATATATTGATTAGTCTGCGAACAAGCTTTGCAGATTTTGCCACCGCTTTCACAGAAGTGGTAGACTTCGTTCCTTATGAAGATTCTCTGAAACAACTGGCGCGCGAACGCTATAAAGCCTACCGCGTGGCTGGTTTCAACCTGAATACGGCAACCTGGAAATAA", + "dna_sequence_length": 444, + "functions": [ + "DNA polymerase III, chi subunit" + ], + "id": "CDS_4175", + "location": [ + [ + "NC_000913", + 4484280, + "-", + 444 + ] + ], + "md5": "a8088a80a043dbef8079fa07bf01a0c0", + "parent_gene": "", + "protein_md5": "73e440d3b37bece233f6f8c9b7987fe1", + "protein_translation": "MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "GeneID:948791" + ], + [ + "gene_synonym", + "pepA" + ], + [ + "gene_synonym", + "carP" + ], + [ + "gene_synonym", + "EcoGene:EG10694" + ], + [ + "gene_synonym", + "ECK4253" + ], + [ + "gene_synonym", + "NP_418681.1" + ], + [ + "gene_synonym", + "GI:16132082" + ], + [ + "gene_synonym", + "JW4217" + ], + [ + "gene_synonym", + "xerB" + ], + [ + "gene_synonym", + "b4260" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68767" + ], + [ + "gene_synonym", + "ASAP:ABE-0013953" + ] 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"gene_synonym", + "GeneID:948795" + ], + [ + "gene_synonym", + "b4261" + ], + [ + "gene_synonym", + "EcoGene:EG12535" + ], + [ + "gene_synonym", + "ECK4254" + ], + [ + "gene_synonym", + "NP_418682.1" + ], + [ + "gene_synonym", + "GI:16132083" + ], + [ + "gene_synonym", + "yjgP" + ], + [ + "gene_synonym", + "JW4218" + ], + [ + "gene_synonym", + "lptF" + ], + [ + "gene_synonym", + "ASAP:ABE-0013958" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF98" + ] + ], + "dna_sequence": 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"ASAP:ABE-0013960" + ], + [ + "gene_synonym", + "JW5760" + ], + [ + "gene_synonym", + "GI:90111715" + ], + [ + "gene_synonym", + "yjgQ" + ], + [ + "gene_synonym", + "NP_418683.4" + ], + [ + "gene_synonym", + "b4262" + ], + [ + "gene_synonym", + "lptG" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:946066" + ], + [ + "gene_synonym", + "b4268" + ], + [ + "gene_synonym", + "idnK" + ], + [ + "gene_synonym", + "NP_418689.1" + ], + [ + "gene_synonym", + "gntV" + ], + [ + "gene_synonym", + "JW4225" + ] + ], + "dna_sequence": "ATGGCGGGTGAAAGCTTTATTTTGATGGGCGTTTCAGGGAGTGGTAAAACATTAATTGGTAGCAAGGTTGCCGCGTTATTATCTGCTAAATTTATTGATGGTGACGATCTTCATCCAGCCAAAAATATAGATAAAATGTCGCAGGGTATTCCATTATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATGCAGCGTCGGGCTGGGCATTTTATGCCGGTAGCGTTACTAAAAAGTCAGTTTGAGGCACTGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGACAAAACAGAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGA", + "dna_sequence_length": 564, + "functions": [ + "D-gluconate kinase, thermosensitive" + ], + "id": "CDS_4184", + "location": [ + [ + "NC_000913", + 4494623, + "+", + 564 + ] + ], + "md5": "fca417a483ae123877c643b40937fa1b", + "parent_gene": "", + "protein_md5": "8bef7645bff59027078b8dcd71c3ac20", + "protein_translation": "MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWLERLNDASYSLYKKNETGFIVCSSLKKQYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEALERPQADEQDIVRIDINHDIANVTEQCRQAVLAIRQNRICAKEGSASDQRCE", + "protein_translation_length": 187, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4262" + ], + [ + "gene_synonym", + "GeneID:948802" + ], + [ + "gene_synonym", + "EcoGene:EG11436" + ], + [ + "gene_synonym", + "yjgB" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27250" + ], + [ + "gene_synonym", + "ahr" + ], + [ + "gene_synonym", + "b4269" + ], + [ + "gene_synonym", + "JW5761" + ], + [ + "gene_synonym", + "GI:90111716" + ], + [ + "gene_synonym", + "NP_418690.4" + ], + [ + "gene_synonym", + "ASAP:ABE-0013982" + ] + ], + "dna_sequence": 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"gene_synonym", + "yjgC" + ], + [ + "gene_synonym", + "GeneID:948782" + ], + [ + "gene_synonym", + "EcoGene:EG12364" + ], + [ + "gene_synonym", + "ASAP:ABE-0013992" + ], + [ + "gene_synonym", + "JW4227" + ] + ], + "dna_sequence": 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"EcoGene:EG40004" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF58" + ], + [ + "gene_synonym", + "NP_418693.1" + ], + [ + "gene_synonym", + "ECK0358" + ], + [ + "gene_synonym", + "GI:16132094" + ], + [ + "gene_synonym", + "ASAP:ABE-0014001" + ], + [ + "gene_synonym", + "insD1" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "EcoGene:EG12543" + ], + [ + "gene_synonym", + "yjgX" + ], + [ + "gene_synonym", + "JW5764" + ], + [ + "gene_synonym", + "JW5763" + ], + [ + "gene_synonym", + "JW4234" + ], + [ + "gene_synonym", + "ASAP:ABE-0014007" + ], + [ + "gene_synonym", + "yjgW" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:948805" + ], + [ + "gene_synonym", + "insG" + ], + [ + "gene_synonym", + "ECK4268" + ], + [ + "gene_synonym", + "EcoGene:EG40007" + ], + [ + "gene_synonym", + "b4278" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03835" + ], + [ + "gene_synonym", + "ASAP:ABE-0014021" + ], + [ + "gene_synonym", + "GI:16132099" + ] + ], + "dna_sequence": 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"gene_synonym", + "UniProtKB/Swiss-Prot:P39352" + ], + [ + "gene_synonym", + "b4279" + ], + [ + "gene_synonym", + "ASAP:ABE-0014025" + ], + [ + "gene_synonym", + "GI:90111718" + ], + [ + "gene_synonym", + "JW5768" + ], + [ + "gene_synonym", + "EcoGene:EG12544" + ] + ], + "dna_sequence": 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binding protein" + ], + "id": "CDS_4204", + "location": [ + [ + "NC_000913", + 4514308, + "-", + 903 + ] + ], + "md5": "5fcd8de5185d9f4d0fd1466bbb2cdf11", + "parent_gene": "", + "protein_md5": "c4ae3479ad18eee121eb99383b10962d", + "protein_translation": "MLAFIRFLFAGLLLVISHAFAATVQDEHGTFTLEKTPQRIVVLELSFADALAAVDVIPIGIADDNDAKRILPEVRAHLKPWQSVGTRAQPSLEAIAALKPDLIIADSSRHAGVYIALQQIAPVLLLKSRNETYAENLQSAAIIGEMVGKKREMQARLEQHKERMAQWASQLPKGTRVAFGTSREQQFNLHTQETWTGSVLASLGLNVPAAMAGASMPSIGLEQLLAVNPAWLLVAHYREESIVKRWQQDPLWQMLTAAQKQQVASVDSNTWARMRGIFAAERIAADTVKIFHHQPLTVVK", + "protein_translation_length": 300, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13036" + ], + [ + "gene_synonym", + "GeneID:946427" + ], + [ + "gene_synonym", + "b4291" + ], + [ + "gene_synonym", + "JW4251" + ], + [ + "gene_synonym", + "EcoGene:EG10286" + ], + [ + "gene_synonym", + "GI:16132112" + ], + [ + "gene_synonym", + "fecA" + ], + [ + "gene_synonym", + "ASAP:ABE-0014067" + ], + [ + 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"JW4252" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23485" + ], + [ + "gene_synonym", + "ECK4282" + ], + [ + "gene_synonym", + "EcoGene:EG10292" + ], + [ + "gene_synonym", + "GeneID:949104" + ], + [ + "gene_synonym", + "GI:16132113" + ], + [ + "gene_synonym", + "ASAP:ABE-0014070" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_418713.1" + ], + [ + "gene_synonym", + "GI:16132114" + ], + [ + "gene_synonym", + "EcoGene:EG10291" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23484" + ], + [ + "gene_synonym", + "ASAP:ABE-0014072" + ], + [ + "gene_synonym", + "fecI" + ] + ], + "dna_sequence": "ATGTCTGACCGCGCCACTACCACAGCTTCCTTAACGTTCGAGTCGCTTTATGGCACACATCACGGCTGGTTGAAAAGCTGGCTGACGCGCAAACTCCAGTCTGCTTTTGATGCAGATGACATTGCCCAGGACACTTTTTTGCGGGTAATGGTCAGCGAAACGCTCTCGACGATCCGCGATCCTCGCTCCTTCCTCTGCACTATCGCCAAACGCGTGATGGTGGACCTGTTTCGCCGAAACGCGCTGGAAAAAGCGTATCTGGAGATGCTGGCGCTTATGCCGGAGGGGGGAGCGCCTTCACCTGAGGAACGCGAAAGCCAACTCGAGACCCTACAACTCCTCGACAGCATGCTGGACGGGCTAAACGGCAAAACACGTGAAGCGTTTCTGCTTTCGCAACTGGATGGTCTGACATACAGCGAGATTGCGCACAAACTCGGTGTTTCCATCAGCTCCGTGAAAAAATACGTGGCGAAAGCCGTCGAGCACTGCCTGCTGTTCCGTCTGGAGTATGGGTTATGA", + "dna_sequence_length": 522, + "functions": [ + "RNA polymerase sigma-19 factor, fec operon-specific", + "ECF sigma factor" + ], + "id": "CDS_4207", + "location": [ + [ + "NC_000913", + 4518235, + "-", + 522 + ] + ], + "md5": "bced95741ab3705f3187189e54426652", + "parent_gene": "", + "protein_md5": "950bf3a1043701a72038bd6628bf2e3a", + "protein_translation": "MSDRATTTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMVSETLSTIRDPRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPEGGAPSPEERESQLETLQLLDSMLDGLNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKAVEHCLLFRLEYGL", + "protein_translation_length": 173, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "insA" + ], + [ + "gene_synonym", + "ECK4562" + ], + [ + "gene_synonym", + "EcoGene:EG40001" + ], + [ + "gene_synonym", + "GeneID:948830" + ], + [ + "gene_synonym", + "b4294" + ], + [ + "gene_synonym", + "GI:16132115" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF12" + ], + [ + "gene_synonym", + "ASAP:ABE-0014077" + ], + [ + "gene_synonym", + "NP_418714.1" + ] + ], + "dna_sequence": "GTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCCTTGCCGTAAAACATGGCAACTACAGTTCACTTACACCGCCTCTCAGCCCGGTAAGCACCAGAAAATCATTGATATGGCCATGAATGGCGTCGGATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA", + "dna_sequence_length": 276, + "functions": [ + "IS1 repressor TnpA" + ], + "id": "CDS_4208", + "location": [ + [ + "NC_000913", + 4518527, + "+", + 276 + ] + ], + "md5": "f5af3585650baef18ef489643e546acb", + "parent_gene": "", + "protein_md5": "6ba2017697fea8233c5451e6b898f588", + "protein_translation": "MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSPCRKTWQLQFTYTASQPGKHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK0022" + ], + [ + "gene_synonym", + "GeneID:4056034" + ], + [ + "gene_synonym", + "insB1" + ], + [ + "gene_synonym", + "b4576" + ], + [ + "gene_synonym", + "EcoGene:EG40002" + ], + [ + "gene_synonym", + "ASAP:ABE-0285109" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF29" + ] + ], + "dna_sequence": "ATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAACCGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACAGTGGGGCTACGTCGGTGCTAAATCACGTCAGCGCTGGCTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTGGCGCACGTCTTCGGTGAACGCACTCTGGCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAA", + "dna_sequence_length": 504, + "id": "CDS_4209", + "location": [ + [ + "NC_000913", + 4518721, + "+", + 504 + ] + ], + "md5": "a04d791e206d163133192e809639bc24", + "parent_gene": "", + "protein_md5": "916595ab6f36a6d064f6063074541481", + "protein_translation": "MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLLSLLSAFEVVV", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW5952" + ], + [ + "gene_synonym", + "GeneID:948827" + ], + [ + "gene_synonym", + "ECK4284" + ], + [ + "gene_synonym", + "EcoGene:EG12604" + ], + [ + "gene_synonym", + "GI:90111724" + ], + [ + "gene_synonym", + "b4295" + ], + [ + "gene_synonym", + "yjhU" + ], + [ + "gene_synonym", + "ASAP:ABE-0014079" + ], + [ + "gene_synonym", + "NP_418715.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39356" + ] + ], + "dna_sequence": "GTGGATAGAGATCAAACAAACAGCAGCCTGTTCAATGATGATCCCGTACTTCATGCAACATGGCTGTACTATCAGGAAGGCAAAAGCCAGACTGAAGTTGCAGCTATCATGGGGGTGTCCCGCGTCACGGTTGTCAAATACCTGCAAACAGCCCGGGAAAATGGACTGGTTCATATCAACCTGGATGTGAATGTCTTTGGCTCTATCGACGCTGCTTTGCAAATTCGCGATAAATTCAATCTCCAGAGAGTGATCATCGTGCCGGATGGCGAACATGCCGGAAAACGTGATGATACAAAGCTGATGCGGACTCGCCTTTCACGTGCCGGTGGCATGTATCTGAATCAGGTGATTGAGAATGGTGATGTGCTGGGGGTTGCCTGGGGAAGAACAATCCATCAGATGAGCAAAACCATGACGCCGAAGTCATGTAAAAATGTCACCGTTATACAGATGCTCGGTTCCATGCCATCTCAGCCAGACCTGACGATCATTGAATCCTCATCGCAAATCGCCTACAAGCTTTCAGGCCGTGTCGCCTCGCTGCACGTGCCCGCCGTGGTATCAAGCGCCAGACTGGCCATGGAGTTACAGGCAGAGCCTATTATTCGATCGAATTTTGACGTTCTGACTCGCTGTACGAAAGCCTTTTTTGTCGTGGGTAACGCGCTTGATGAAAATCCCCTGATTCGGGTGGGCGTGCTGAATAAGAAGGAAATGCAGACGTATCGGGATTTAGGCGCAGTAGGTGTCATTTGTGGTCGCTTCTATGACAAGGAAGGGATGCCCGTCGTGGCTGATGTTGACCAGCGTATTCTGGGAATCAGTCTGGCTCAGCTAAGGCAGATTGAACGGAAGATCTTCCTTGCTGGTGGGGAAAGAGGCTATGACGCAACGTTGGGTGCCCTGCTGGGAGGATATGTCACGGACCTGATTGTTGATGAAGGAACGGCAGAGTTTTTGCTGGCGTGTGAATTACCACACTAA", + "dna_sequence_length": 987, + "functions": [ + "putative DNA-binding transcriptional regulator", + "KpLE2 phage-like element" + ], + "id": "CDS_4210", + "location": [ + [ + "NC_000913", + 4520324, + "-", + 987 + ] + ], + "md5": "3dac60ca891f833268459dd89e1e1b61", + "parent_gene": "", + "protein_md5": "6c1b608ebee893fcf621d63906ff068a", + "protein_translation": "MDRDQTNSSLFNDDPVLHATWLYYQEGKSQTEVAAIMGVSRVTVVKYLQTARENGLVHINLDVNVFGSIDAALQIRDKFNLQRVIIVPDGEHAGKRDDTKLMRTRLSRAGGMYLNQVIENGDVLGVAWGRTIHQMSKTMTPKSCKNVTVIQMLGSMPSQPDLTIIESSSQIAYKLSGRVASLHVPAVVSSARLAMELQAEPIIRSNFDVLTRCTKAFFVVGNALDENPLIRVGVLNKKEMQTYRDLGAVGVICGRFYDKEGMPVVADVDQRILGISLAQLRQIERKIFLAGGERGYDATLGALLGGYVTDLIVDEGTAEFLLACELPH", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39357" + ], + [ + "gene_synonym", + "yjhF" + ], + [ + "gene_synonym", + "JW4258" + ], + [ + "gene_synonym", + "ECK4285" + ], + [ + "gene_synonym", + "b4296" + ], + [ + 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"minor component of type 1 fimbriae" + ], + "id": "CDS_4237", + "location": [ + [ + "NC_000913", + 4547742, + "+", + 531 + ] + ], + "md5": "4d8f9fde3560885e4847ec3064e2ba30", + "parent_gene": "", + "protein_md5": "9a61cbd8e64ac2456e2eb2bd91990de7", + "protein_translation": "MRNKPFYLLCAFLWLAVSHALAADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "JW4282" + ], + [ + "gene_synonym", + "b4319" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08190" + ], + [ + "gene_synonym", + "NP_418739.1" + ], + [ + "gene_synonym", + "EcoGene:EG10314" + ], + [ + "gene_synonym", + "fimG" + ], + [ + "gene_synonym", + "ASAP:ABE-0014155" + ], + [ + "gene_synonym", + "GI:16132140" + ], + [ + "gene_synonym", + "ECK4310" + ], + [ + "gene_synonym", + "GeneID:948846" + ] + ], + "dna_sequence": 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"ATGCATGTGCTTAACATTCTCTGGGTGGTATTCGGCATTGGTCTGATGCTGGTACTGAATTTGAAGTTCAAAATCAATTCAATGGTGGCTTTGTTGGTGGCGGCGCTGTCCGTCGGGATGCTGGCGGGCATGGATTTGATGTCGCTGCTGCACACTATGAAAGCGGGCTTCGGCAACACGCTGGGGGAACTGGCTATCATCGTGGTGTTCGGTGCGGTCATCGGTAAATTGATGGTCGACTCCGGCGCGGCTCACCAGATAGCGCATACGCTGCTGGCGCGTCTCGGTCTGCGCTATGTACAGCTGTCGGTGATTATCATCGGCCTGATTTTTGGTCTGGCGATGTTCTATGAAGTGGCCTTTATCATGTTAGCGCCGCTGGTTATTGTTATTGCCGCCGAAGCTAAAATTCCGTTCCTGAAACTGGCGATCCCGGCAGTAGCAGCTGCCACTACCGCACATTCACTGTTCCCACCGCAGCCGGGTCCGGTGGCGCTGGTGAATGCTTATGGCGCGGATATGGGGATGGTTTATATCTATGGCGTACTGGTGACGATCCCAAGTGTAATCTGCGCAGGTCTGATCCTGCCGAAGTTCCTCGGCAATCTTGAGCGCCCAACGCCATCATTCCTGAAAGCAGATCAACCGGTAGATATGAATAATCTGCCCTCTTTCGGCGTTTCGATTCTGGTGCCGCTGATCCCGGCGATCATTATGATCTCTACCACCATCGCCAATATCTGGCTGGTAAAAGATACCCCTGCCTGGGAAGTGGTTAACTTTATCGGTTCCTCGCCGATTGCAATGTTTATTGCGATGGTGGTTGCATTCGTACTCTTTGGCACCGCACGTGGTCATGACATGCAGTGGGTGATGAACGCTTTTGAAAGCGCGGTGAAGAGTATTGCAATGGTGATTCTGATCATCGGTGCGGGTGGCGTGCTGAAGCAGACCATCATCGACACCGGCATTGGCGACACCATCGGCATGTTGATGTCCCACGGCAATATCTCGCCCTACATCATGGCATGGCTGATCACTGTGCTAATTCGTCTGGCGACGGGTCAGGGTGTCGTTTCGGCGATGACCGCCGCCGGGATTATCAGTGCTGCAATCCTAGATCCAGCAACTGGTCAGCTGGTTGGCGTGAATCCGGCGCTGCTGGTACTGGCGACGGCTGCGGGTTCCAACACCCTCACCCACATTAACGATGCATCTTTCTGGTTGTTCAAAGGTTACTTTGACCTGTCAGTAAAAGACACGTTGAAAACCTGGGGTCTGCTGGAGCTGGTCAACTCCGTGGTTGGGCTGATTATTGTGCTGATTATTAGCATGGTAGCGTAA", 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"gene_synonym", + "uxuA" + ], + [ + "gene_synonym", + "ASAP:ABE-0014173" + ], + [ + "gene_synonym", + "GeneID:947082" + ], + [ + "gene_synonym", + "GI:16132143" + ], + [ + "gene_synonym", + "EcoGene:EG11066" + ], + [ + "gene_synonym", + "JW4285" + ], + [ + "gene_synonym", + "ECK4313" + ] + ], + "dna_sequence": 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esterase" + ], + "id": "CDS_4252", + "location": [ + [ + "NC_000913", + 4563603, + "-", + 861 + ] + ], + "md5": "fde2766f4e54874ca68470cd1c4a69d4", + "parent_gene": "", + "protein_md5": "6d7340cc0d17d974210636b1af7004d3", + "protein_translation": "MTKSISLSKRISIIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQSSH", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b4334" + ], + [ + "gene_synonym", + "ASAP:ABE-0014212" + ], + [ + "gene_synonym", + "GI:90111734" + ], + [ + "gene_synonym", + "yjiL" + ], + [ + "gene_synonym", + "EcoGene:EG12573" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39383" + ], + [ + "gene_synonym", + "NP_418754.2" + ], + [ + "gene_synonym", + "ECK4325" + ], + [ + "gene_synonym", + 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"NP_418756.1" + ], + [ + "gene_synonym", + "JW4299" + ], + [ + "gene_synonym", + "yjiN" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39385" + ], + [ + "gene_synonym", + "ECK4327" + ], + [ + "gene_synonym", + "GI:16132157" + ] + ], + "dna_sequence": 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"NC_000913", + 4568998, + "+", + 921 + ] + ], + "md5": "6cf9a211443c62c1cd503a968cb75f29", + "parent_gene": "", + "protein_md5": "73f87c27c9ac302d9f41682e2f26e6ea", + "protein_translation": "MTNFTTSTPHDALFKTFLTHPDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRALHSDILWSVKTREGDGYIYVVIEHQSREDIHMAFRLMRYSMAVM", + "protein_translation_length": 103, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "b4340" + ], + [ + "gene_synonym", + "ECK4331" + ], + [ + "gene_synonym", + "yjiR" + ], + [ + "gene_synonym", + "NP_418760.1" + ], + [ + "gene_synonym", + "GeneID:949089" + ], + [ + "gene_synonym", + "JW4303" + ], + [ + "gene_synonym", + "ASAP:ABE-0014232" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39389" + ], + [ + "gene_synonym", + "GI:16132161" + ], + [ + "gene_synonym", + "EcoGene:EG12579" + ] + ], + "dna_sequence": 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"gene_synonym", + "UniProtKB/Swiss-Prot:P39390" + ], + [ + "gene_synonym", + "ASAP:ABE-0014236" + ], + [ + "gene_synonym", + "yjiS" + ], + [ + "gene_synonym", + "NP_418761.1" + ], + [ + "gene_synonym", + "GeneID:948903" + ], + [ + "gene_synonym", + "EcoGene:EG12580" + ], + [ + "gene_synonym", + "JW4304" + ], + [ + "gene_synonym", + "GI:16132162" + ] + ], + "dna_sequence": "ATGGAATTTCACGAAAACAGAGCTAAAGCGCCGTTTATCGGCCTGGTGCAACTCTGGCAGGCGGTGAGGCGTTGGCGGCGGCAAATGCAGACCCGACGCGTGTTACAGCAGATGAGTGATGAGCGGTTGAAGGATATCGGGTTACGCAGGGAGGATGTGGAGTGA", + "dna_sequence_length": 165, + "functions": [ + "DUF1127 family protein" + ], + "id": "CDS_4259", + "location": [ + [ + "NC_000913", + 4571751, + "+", + 165 + ] + ], + "md5": "73bc31bbf6bcffb444613406990c21e4", + "parent_gene": "", + "protein_md5": "3d9de68baafc0d21f6e70e9890af0763", + "protein_translation": "MEFHENRAKAPFIGLVQLWQAVRRWRRQMQTRRVLQQMSDERLKDIGLRREDVE", + "protein_translation_length": 54, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39391" + ], + [ + "gene_synonym", + "ECK4333" + ], + [ + "gene_synonym", + "b4342" + ], + [ + "gene_synonym", + "ASAP:ABE-0014239" + ], + [ + "gene_synonym", + "yjiT" + ], + [ + "gene_synonym", + "EcoGene:EG12581" + ], + [ + "gene_synonym", + "GeneID:945056" + ], + [ + "gene_synonym", + "JW5787" + ] + ], + "dna_sequence": "TTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACTTTGTGAATCTTAGAGGGTTGAGACAACCGGATGGCCGTCCTCTTTATGAATATCATGCAACCAATGATGAATATACCCAATTAACGCAGCTACTCCGTGCAGTCGGTCAATCACAATCTAATATATGTAATAGGGACTTTGCTGCCTGTTTTGTTCTTTTTTGCTCTGAGTGGTACCGCAGGGATTATGAACGGCAATGCGGATGGACGTGGGACCCTATATATAAAAAAATAGGGATTTCATTCACCGCCACAGAGCTTGGTACTATCGTACCGAAAGGGATGGAAGATTACTGGCTGCGCCCAATTCGATTTTATGAATCTGAACGACGCAATTTTCTCGGAACATTATTCAGTGAAGGTGGTTTACCTTTCCGGCTACTCAAAGAATCAGACAGTCGCTTTCTGGCTGTTTTCTCCAGGATCCTTGGACAATATGAGCAAGCAAAGCAGTCAGGTTTTTCTGCCCTTTCGCTGGCAAGAGCTGTCATAGAAAAATCAGCGCTGCCAACTGTTTTTAGCGAAGATACCTCTGTAGAACTTATCAGTCATATGGCTGATAACCTCAATTCCTTAGTACTTACTCACAACCTAATAAATCACAAAGAACCAGTACAACAGCTTGAGAAGGTTCACCCTACCTGGCGAAGCGAGTTTCCAATACCGTTAGATGATGAAACAGGAACGCATTTTTTGAATGGACTGCTATGCGCAGCCTCTGTAGAGGCTAAGCCTCGACTACAAAAAAATAAGAGTACGCGTTGCCAATTCTATTGGTCAGAAAAGCATCCAGATGAGCTTAGGGTGATAGTATCTCTTCCGGACGAAGTTTCCTTTCCTGTAACAAGCGAGCCGTCAACTACGCGCTTTGAACTTGCCATTTGTGAAGATGGTGAGGAAGTCTCTGGCCTTGGGCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTTGGGAGCATTAAACTTGATGACAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGATTGTGCTCCCTCGGGATAATAGCAATGTTGCTGGTTTTGATGGCCAATCGAGGGCAGTAAACGTATTAGGACTAAAAGCACTACCTGTGAAGGGATGTCAGGACGTTACAGTTACAGCAAATGAAACTTATCGGATTCGCACCGGAAGAGAACAAATCAGCATCGGAAGGTTTGCTCTAAATGGAAAGCGTGCAAGCTGGGTTTGTCATCCAGATGAAACATTTATTGGTGTACCAAAAGTCATTTCTACACTACCGGATATTCAAAGCATTGATGTAACG", 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"gene_synonym", + "ASAP:ABE-0174119" + ], + [ + "gene_synonym", + "yjiV" + ], + [ + "gene_synonym", + "yjiU" + ], + [ + "gene_synonym", + "ECK4467" + ], + [ + "gene_synonym", + "EcoGene:EG12583" + ], + [ + "gene_synonym", + "mcrD" + ] + ], + "dna_sequence": 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"GTGGAACAGCCCGTGATACCTGTCCGTAATATCTATTACATGCTTACCTATGCATGGGGTTATTTACAGGAAATTAAGCAGGCAAACCTTGAAGCCATACCCGGTAACAATCTTCTTGATATCCTGGGGTATGTATTAAATAAAGGGGTTTTACAGCTTTCACGCCGAGGGCTTGAGCTTGATTACAATCCTAACACCGAGATCATTCCTGGCATCAAAGGGCGAATAGAGTTTGCTAAAACAATACGCGGCTTCCATCTTAATCATGGGAAAACCGTCAGTACTTTTGATATGCTTAATGAAGACACGCTGGCTAACCGAATTATAAAAAGCACATTAGCCATATTAATTAAGCATGAAAAGTTAAATTCAACTATCAGAGATGAAGCTCGTTCACTTTATAGAAAATTACCGGGCATTAGCACTCTTCATTTAACTCCGCAGCATTTCAGCTATCTGAATGGCGGAAAAAATACGCGTTATTATAAATTCGTTATCAGTGTCTGCAAATTCATCGTCAATAATTCTATTCCAGGTCAAAACAAAGGACACTACCGTTTCTATGATTTTGAAAGAAACGAAAAAGAGATGTCATTACTTTATCAAAAGTTTCTTTATGAATTTTGCCGTCGTGAATTAACGTCTGCAAACACAACCCGCTCTTATTTAAAATGGGATGCATCGAGTATATCGGATCAGTCACTTAATTTGTTACCTCGAATGGAAACTGACATCACCATTCGCTCATCAGAAAAAATACTTATCGTTGACGCCAAATACTATAAGAGCATTTTTTCACGACGAATGGGAACAGAAAAATTTCATTCGCAAAATCTTTATCAACTGATGAATTACTTATGGTCGTTAAAGCCTGAAAATGGCGAAAACATAGGGGGGTTATTAATATATCCCCACGTAGATACCGCAGTGAAACATCGTTATAAAATTAATGGCTTCGATATTGGCTTGTGTACCGTCAATTTAGGTCAGGAATGGCCGTGTATACATCAAGAATTACTCGACATTTTCGATGAATATCTCAAATAA", 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"functions": [ + "metal-binding GTPase" + ], + "id": "CDS_4269", + "location": [ + [ + "NC_000913", + 4588865, + "-", + 957 + ] + ], + "md5": "e4f613dfa51e26129f5e1f3675c6e1f8", + "parent_gene": "", + "protein_md5": "08af59eb182da08376042bc1a25bb8a7", + "protein_translation": "MNPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKTDVAGEAEKLHERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEENVVSTKPRFHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGVQRLYSADWDRPWGDEKPHSTMVFIGIQLPEEEIRAAFAGLRK", + "protein_translation_length": 318, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4343" + ], + [ + "gene_synonym", + "yjiX" + ], + [ + "gene_synonym", + "GeneID:949090" + ], + [ + "gene_synonym", + "NP_418773.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADC8" + ], + [ + "gene_synonym", + "JW4316" + ], + [ + "gene_synonym", + "EcoGene:EG12585" + ], + [ + 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"gene_synonym", + "ASAP:ABE-0014282" + ], + [ + "gene_synonym", + "cheD" + ], + [ + "gene_synonym", + "GI:16132176" + ], + [ + "gene_synonym", + "NP_418775.1" + ], + [ + "gene_synonym", + "tsr" + ], + [ + "gene_synonym", + "b4355" + ], + [ + "gene_synonym", + "JW4318" + ] + ], + "dna_sequence": 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"gene_synonym", + "yjiZ" + ], + [ + "gene_synonym", + "lgoT" + ], + [ + "gene_synonym", + "ECK4346" + ], + [ + "gene_synonym", + "GeneID:948879" + ], + [ + "gene_synonym", + "NP_418776.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39398" + ], + [ + "gene_synonym", + "yjjL" + ], + [ + "gene_synonym", + "GI:16132177" + ], + [ + "gene_synonym", + "ASAP:ABE-0014284" + ], + [ + "gene_synonym", + "b4356" + ], + [ + "gene_synonym", + "JW4319" + ], + [ + "gene_synonym", + "EcoGene:EG12588" + ] + ], + "dna_sequence": 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"EcoGene:EG12596" + ], + [ + "gene_synonym", + "GI:16132189" + ], + [ + "gene_synonym", + "ASAP:ABE-0014336" + ], + [ + "gene_synonym", + "b4371" + ], + [ + "gene_synonym", + "NP_418788.1" + ] + ], + "dna_sequence": 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"MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFPRND", + "protein_translation_length": 137, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A944" + ], + [ + "gene_synonym", + "JW4335" + ], + [ + "gene_synonym", + "ECK4364" + ], + [ + "gene_synonym", + "GI:16132191" + ], + [ + "gene_synonym", + "NP_418790.1" + ], + [ + "gene_synonym", + "ASAP:ABE-0014342" + ], + [ + "gene_synonym", + "GeneID:948894" + ], + [ + "gene_synonym", + "EcoGene:EG10850" + ], + [ + "gene_synonym", + "rimI" + ], + [ + "gene_synonym", + "b4373" + ] + ], + "dna_sequence": 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"ECK4384" + ], + [ + "gene_synonym", + "NP_418809.4" + ], + [ + "gene_synonym", + "GeneID:948908" + ], + [ + "gene_synonym", + "slt" + ], + [ + "gene_synonym", + "GI:90111747" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGC3" + ], + [ + "gene_synonym", + "b4392" + ], + [ + "gene_synonym", + "ASAP:ABE-0014404" + ], + [ + "gene_synonym", + "EcoGene:EG10950" + ], + [ + "gene_synonym", + "sltY" + ], + [ + "gene_synonym", + "JW4355" + ] + ], + "dna_sequence": 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"protein_translation_length": 645, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4385" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A881" + ], + [ + "gene_synonym", + "EcoGene:EG11029" + ], + [ + "gene_synonym", + "GeneID:948917" + ], + [ + "gene_synonym", + "NP_418810.1" + ], + [ + "gene_synonym", + "b4393" + ], + [ + "gene_synonym", + "ASAP:ABE-0014408" + ], + [ + "gene_synonym", + "trpR" + ], + [ + "gene_synonym", + "JW4356" + ], + [ + "gene_synonym", + "GI:16132210" + ] + ], + "dna_sequence": "ATGGCCCAACAATCACCCTATTCAGCAGCGATGGCAGAACAGCGTCACCAGGAGTGGTTACGTTTTGTCGACCTGCTTAAGAATGCCTACCAAAACGATCTCCATTTACCGTTGTTAAACCTGATGCTGACGCCAGATGAGCGCGAAGCGTTGGGGACTCGCGTGCGTATTGTCGAAGAGCTGTTGCGCGGCGAAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGA", + "dna_sequence_length": 327, + "functions": [ + "transcriptional repressor, tryptophan-binding" + ], + "id": "CDS_4309", + "location": [ 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"ATGCAGACCCCGCACATTCTTATCGTTGAAGACGAGTTGGTAACACGCAACACGTTGAAAAGTATTTTCGAAGCGGAAGGCTATGATGTTTTCGAAGCGACAGATGGCGCGGAAATGCATCAGATCCTCTCTGAATATGACATCAACCTGGTGATCATGGATATCAATCTGCCGGGTAAGAACGGTCTTCTGTTAGCGCGTGAACTGCGCGAGCAGGCGAATGTTGCGTTGATGTTCCTGACTGGCCGTGACAACGAAGTCGATAAAATTCTCGGCCTCGAAATCGGTGCAGATGACTACATCACCAAACCGTTCAACCCGCGTGAACTGACGATTCGTGCACGCAACCTACTGTCCCGTACCATGAATCTGGGTACTGTCAGCGAAGAACGTCGTAGCGTTGAAAGCTACAAGTTCAATGGTTGGGAACTGGACATCAACAGCCGTTCGTTGATCGGCCCTGATGGCGAGCAGTACAAGCTGCCGCGCAGCGAGTTCCGCGCCATGCTTCACTTCTGTGAAAACCCAGGCAAAATTCAGTCCCGTGCTGAACTGCTGAAGAAAATGACCGGCCGTGAGCTGAAACCGCACGACCGTACTGTAGACGTGACGATCCGCCGTATTCGTAAACATTTCGAATCTACGCCGGATACGCCGGAAATCATCGCCACCATTCACGGTGAAGGTTATCGCTTCTGCGGTGATCTGGAAGATTAA", + "dna_sequence_length": 717, + "functions": [ + "response regulator in two-component regulatory system with ArcB or CpxA" + ], + "id": "CDS_4317", + "location": [ + [ + "NC_000913", + 4640306, + "-", + 717 + ] + ], + "md5": "e452b8943ecd4b5e38543fbe36db1b29", + "parent_gene": "", + "protein_md5": "1917eff55d421295934a3e3ab9e8c178", + "protein_translation": "MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED", + "protein_translation_length": 238, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4394" + ], + [ + "gene_synonym", + "NP_418819.1" + ], + [ + "gene_synonym", + "yjjY" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADD9" + ], + [ + "gene_synonym", + "GeneID:948925" + ], + [ + "gene_synonym", + "ASAP:ABE-0014437" + ], + [ + "gene_synonym", + "b4402" + ], + [ + "gene_synonym", + "GI:16132219" + ], + [ + "gene_synonym", + "JW4365" + ], + [ + "gene_synonym", + "EcoGene:EG12601" + ] + ], + "dna_sequence": "ATGACTAAAGTACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAA", + "dna_sequence_length": 141, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_4318", + "location": [ + [ + "NC_000913", + 4640402, + "+", + 141 + ] + ], + "md5": "774c8ad4517921114a55c82b4917d9a6", + "parent_gene": "", + "protein_md5": "833365d3c81d8fff0f42f49ee69d9fa9", + "protein_translation": "MTKVRNCVLDALSINVNNIISLVVGTFPQDPTVSKTAVILTILTAT", + "protein_translation_length": 46, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4395" + ], + [ + "gene_synonym", + "lasT" + ], + [ + "gene_synonym", + "yjtD" + ], + [ + "gene_synonym", + "NP_418820.1" + ], + [ + "gene_synonym", + "GeneID:948924" + ], + [ + "gene_synonym", + "EcoGene:EG12309" + ], + [ + "gene_synonym", + "ASAP:ABE-0014442" + ], + [ + "gene_synonym", + "b4403" + ], + [ + "gene_synonym", + "GI:16132220" + ], + [ + "gene_synonym", + "JW4366" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37005" + ] + ], + "dna_sequence": "ATGCGTATAACGATTATTCTGGTCGCACCCGCCAGAGCAGAAAATATTGGGGCAGCGGCGCGGGCAATGAAAACGATGGGGTTTAGCGATCTGCGGATTGTCGATAGTCAGGCACACCTGGAGCCAGCCACCCGCTGGGTCGCACATGGATCTGGTGATATTATTGATAATATTAAAGTTTTCCCGACATTGGCTGAATCGTTACACGATGTCGATTTCACTGTCGCCACCACTGCGCGCAGTCGGGCGAAATATCATTACTACGCCACGCCAGTTGAACTGGTGCCGCTGTTAGAGGAAAAATCTTCATGGATGAGCCATGCCGCGCTGGTGTTTGGTCGCGAAGATTCCGGGTTGACTAACGAAGAGTTAGCGTTGGCTGACGTTCTTACTGGTGTGCCGATGGTGGCGGATTATCCTTCGCTCAATCTGGGGCAGGCGGTGATGGTCTATTGCTATCAATTAGCAACATTAATACAACAACCGGCGAAAAGTGATGCAACGGCAGACCAACATCAACTGCAAGCTTTACGCGAACGAGCCATGACATTGCTGACGACTCTGGCAGTGGCAGATGACATAAAACTGGTCGACTGGTTACAACAACGCCTGGGGCTTTTAGAGCAACGAGACACGGCAATGTTGCACCGTTTGCTGCATGATATTGAAAAAAATATCACCAAATAA", + "dna_sequence_length": 687, + "functions": [ + "putative methyltransferase" + ], + "id": "CDS_4319", + "location": [ + [ + "NC_000913", + 4640942, + "+", + 687 + ] + ], + "md5": "bb3b817ca5149195111092e3115eca06", + "parent_gene": "", + "protein_md5": "c75e37d0bd96316e92f64e8a61352941", + "protein_translation": "MRITIILVAPARAENIGAAARAMKTMGFSDLRIVDSQAHLEPATRWVAHGSGDIIDNIKVFPTLAESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLTNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQQPAKSDATADQHQLQALRERAMTLLTTLAVADDIKLVDWLQQRLGLLEQRDTAMLHRLLHDIEKNITK", + "protein_translation_length": 228, + "type": "CDS" + } + ], + "dna_size": 4641652, + "domain": "Bacteria", + "external_source_origination_date": "16-DEC-2014", + "feature_counts": { + "CDS": 4319, + "mRNA": 0, + "non_coding_features": 0, + "protein_encoding_gene": 0 + }, + "features": [], + "gc_content": 0.50791, + "genetic_code": 11, + "genome_tiers": [ + "ExternalDB" + ], + "genome_type": "Unknown", + "id": "Escherichia_coli_str_K_12_substr_MG1655_RefSeq", + "md5": "afd67f98d72869f1e5b943aa9efd72af", + "molecule_type": "Unknown", + "mrnas": [], + "non_coding_features": [], + "num_contigs": 1, + "original_source_file_name": "GCF_000005845.2_ASM584v2_genomic.gbff", + "publications": [ + [ + 16397293, + "PubMed", + "Escherichia coli K-12: a cooperatively developed annotation snapshot--2005", + "http://www.ncbi.nlm.nih.gov/pubmed/16397293", + "2006", + "Riley,M., Abe,T., Arnaud,M.B., Berlyn,M.K., Blattner,F.R., Chaudhuri,R.R., Glasner,J.D., Horiuchi,T., Keseler,I.M., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Rudd,K.E., Serres,M.H., Thomas,G.H., Thomson,N.R., Wishart,D. and Wanner,B.L.", + "Nucleic Acids Res. 34 (1), 1-9 (2006)" + ], + [ + 0, + "", + "Direct Submission", + "", + "15-NOV-2013", + "Blattner,F.R. and Plunkett,G. III.", + "Submitted (15-NOV-2013) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "02-SEP-1997", + "Blattner,F.R. and Plunkett,G. III.", + "Submitted (02-SEP-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "A more accurate sequence comparison between genomes of Escherichia coli K12 W3110 and MG1655 strains", + "", + "", + "Hayashi,K., Morooka,N., Mori,H. and Horiuchi,T.", + "Unpublished" + ], + [ + 0, + "", + "Direct Submission", + "", + "30-JUL-2014", + "Blattner,F.R. and Plunkett,G. III.", + "Submitted (30-JUL-2014) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "10-JUN-2004", + "Plunkett,G. III.", + "Submitted (10-JUN-2004) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "06-FEB-2013", + "Rudd,K.E.", + "Submitted (06-FEB-2013) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "07-FEB-2006", + "Plunkett,G. III.", + "Submitted (07-FEB-2006) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "Workshop on Annotation of Escherichia coli K-12", + "", + "", + "Arnaud,M., Berlyn,M.K.B., Blattner,F.R., Galperin,M.Y., Glasner,J.D., Horiuchi,T., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Riley,M., Rudd,K.E., Serres,M.H., Thomas,G.H. and Wanner,B.L.", + "Unpublished" + ], + [ + 0, + "", + "Direct Submission", + "", + "26-SEP-2013", + "Blattner,F.R. and Plunkett,G. III.", + "Submitted (26-SEP-2013) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 9278503, + "PubMed", + "The complete genome sequence of Escherichia coli K-12", + "http://www.ncbi.nlm.nih.gov/pubmed/9278503", + "1997", + "Blattner,F.R., Plunkett,G. III, Bloch,C.A., Perna,N.T., Burland,V., Riley,M., Collado-Vides,J., Glasner,J.D., Rode,C.K., Mayhew,G.F., Gregor,J., Davis,N.W., Kirkpatrick,H.A., Goeden,M.A., Rose,D.J., Mau,B. and Shao,Y.", + "Science 277 (5331), 1453-1462 (1997)" + ], + [ + 0, + "NCBI Genome Project", + "Direct Submission", + "", + "26-AUG-2014", + "", + "Submitted (26-AUG-2014) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "16-JAN-1997", + "Blattner,F.R. and Plunkett,G. III.", + "Submitted (16-JAN-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 16738553, + "PubMed", + "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110", + "http://www.ncbi.nlm.nih.gov/pubmed/16738553", + "2006", + "Hayashi,K., Morooka,N., Yamamoto,Y., Fujita,K., Isono,K., Choi,S., Ohtsubo,E., Baba,T., Wanner,B.L., Mori,H. and Horiuchi,T.", + "Mol. Syst. Biol. 2, 2006 (2006)" + ], + [ + 0, + "", + "ASAP: Escherichia coli K-12 strain MG1655 version m56", + "", + "", + "Glasner,J.D., Perna,N.T., Plunkett,G. III, Anderson,B.D., Bockhorst,J., Hu,J.C., Riley,M., Rudd,K.E. and Serres,M.H.", + "Unpublished" + ], + [ + 0, + "", + "Escherichia coli K-12 MG1655 yqiK-rfaE intergenic region, genomic sequence correction", + "", + "", + "Perna,N.T.", + "Unpublished" + ], + [ + 0, + "", + "Direct Submission", + "", + "13-OCT-1998", + "Plunkett,G. III.", + "Submitted (13-OCT-1998) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "24-APR-2007", + "Rudd,K.E.", + "Submitted (24-APR-2007) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA" + ], + [ + 0, + "", + "A manual approach to accurate translation start site annotation: an E. coli K-12 case study", + "", + "", + "Rudd,K.E.", + "Unpublished" + ] + ], + "reference_annotation": 0, + "scientific_name": "Escherichia coli str. K-12 substr. MG1655", + "source": "RefSeq", + "source_id": "NC_000913", + "taxonomy": "cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli K-12", + "type": "reference_test", + "warnings": [ + "For prokaryotes, CDS array should generally be the same length as the Features array.", + "Genome molecule_type Unknown is not expected for domain Bacteria.", + "Unable to determine organism taxonomy" + ] +} \ No newline at end of file From 595c78b5b3c282026affd22c858c3a1f74d45f2b Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 6 Jun 2025 18:48:41 -0700 Subject: [PATCH 37/70] add manual handle setup --- test/problematic_tests/save_genome_test.py | 26 +++++++++++++++++++--- 1 file changed, 23 insertions(+), 3 deletions(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 66f18b2e..76d213b1 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -10,8 +10,9 @@ import urllib.parse import urllib.request from configparser import ConfigParser -from os import environ +from copy import deepcopy from datetime import datetime +from os import environ import requests # noqa: F401 @@ -262,8 +263,27 @@ def yest_one_genome_with_hidden(self): self.check_genome_info(ret, genome_name) self.check_hidden(genome_name) + def _setup_handle(self): + # Save genome file to scratch dir + file_path = os.path.join(self.scratch, "e_coli_with_assembly.json") + with open(file_path, "w") as f: + json.dump(self.test_genome_data, f, indent=4) + + # Upload to blobstore + shock_ret = self.dfu.file_to_shock( + {"file_path": file_path, "make_handle": 1, "pack": "gzip"} + ) + + # Return updated genome + genome_with_handle_ref = deepcopy(self.test_genome_data) + genome_with_handle_ref["genbank_handle_ref"] = shock_ret['handle']['hid'] + return genome_with_handle_ref + def test_genomes(self): self.start_test() + + genome_with_handle_ref = self._setup_handle() + genome_name1 = 'test_genome_1' genome_name2 = 'test_genome_2' @@ -321,12 +341,12 @@ def test_genomes(self): inputs = [ { 'name': genome_name1, - 'data': self.test_genome_data, + 'data': genome_with_handle_ref, 'meta': {"foo": "zoo"} }, { 'name': genome_name2, - 'data': self.test_genome_data, + 'data': genome_with_handle_ref, 'meta': {"zoo": "foo"} } ] From 89925448b830494c486cd3897bbec1ff0c2ff3ce Mon Sep 17 00:00:00 2001 From: Sijie Date: Tue, 10 Jun 2025 12:08:29 -0700 Subject: [PATCH 38/70] refactor _set_handle function & delete old json.file --- data.json | 288029 ------------------ test/problematic_tests/save_genome_test.py | 19 +- 2 files changed, 10 insertions(+), 288038 deletions(-) delete mode 100644 data.json diff --git a/data.json b/data.json deleted file mode 100644 index e2b6067b..00000000 --- a/data.json +++ /dev/null @@ -1,288029 +0,0 @@ -{ - "assembly_ref": "79321/1/1", - "cdss": [ - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944742" - ], - [ - "gene_synonym", - "thrL" - ], - [ - "gene_synonym", - "b0001" - ], - [ - "gene_synonym", - "NP_414542.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD86" - ], - [ - "gene_synonym", - "ASAP:ABE-0000006" - ], - [ - "gene_synonym", - "JW4367" - ], - [ - "gene_synonym", - "GI:16127995" - ], - [ - "gene_synonym", - "ECK0001" - ], - [ - "gene_synonym", - "EcoGene:EG11277" - ] - ], - "dna_sequence": "ATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGA", - "dna_sequence_length": 66, - "functions": [ - "thr operon leader peptide" - ], - "id": "CDS_1", - "location": [ - [ - "NC_000913", - 190, - "+", - 66 - ] - ], - "md5": "cd572f0df722f00fc2123c68f381b98b", - "parent_gene": "", - "protein_md5": "13fe4258b37e32edda386faa50ec5fdf", - "protein_translation": "MKRISTTITTTITITTGNGAG", - "protein_translation_length": 21, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0002" - ], - [ - "gene_synonym", - "EcoGene:EG10998" - ], - [ - "gene_synonym", - "Hs" - ], - [ - "gene_synonym", - "thrD" - ], - [ - "gene_synonym", - "GeneID:945803" - ], - [ - "gene_synonym", - "thrA" - ], - [ - "gene_synonym", - "GI:16127996" - ], - [ - "gene_synonym", - "thrA1" - ], - [ - "gene_synonym", - "thrA2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00561" - ], - [ - "gene_synonym", - "ECK0002" - ], - [ - "gene_synonym", - "ASAP:ABE-0000008" - ], - [ - "gene_synonym", - "NP_414543.1" - ], - [ - "gene_synonym", - "JW0001" - ] - ], - "dna_sequence": "ATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGAACGTTTTCTGCGTGTTGCCGATATTCTGGAAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTCTCTGCCCCCGCCAAAATCACCAACCACCTGGTGGCGATGATTGAAAAAACCATTAGCGGCCAGGATGCTTTACCCAATATCAGCGATGCCGAACGTATTTTTGCCGAACTTTTGACGGGACTCGCCGCCGCCCAGCCGGGGTTCCCGCTGGCGCAATTGAAAACTTTCGTCGATCAGGAATTTGCCCAAATAAAACATGTCCTGCATGGCATTAGTTTGTTGGGGCAGTGCCCGGATAGCATCAACGCTGCGCTGATTTGCCGTGGCGAGAAAATGTCGATCGCCATTATGGCCGGCGTATTAGAAGCGCGCGGTCACAACGTTACTGTTATCGATCCGGTCGAAAAACTGCTGGCAGTGGGGCATTACCTCGAATCTACCGTCGATATTGCTGAGTCCACCCGCCGTATTGCGGCAAGCCGCATTCCGGCTGATCACATGGTGCTGATGGCAGGTTTCACCGCCGGTAATGAAAAAGGCGAACTGGTGGTGCTTGGACGCAACGGTTCCGACTACTCTGCTGCGGTGCTGGCTGCCTGTTTACGCGCCGATTGTTGCGAGATTTGGACGGACGTTGACGGGGTCTATACCTGCGACCCGCGTCAGGTGCCCGATGCGAGGTTGTTGAAGTCGATGTCCTACCAGGAAGCGATGGAGCTTTCCTACTTCGGCGCTAAAGTTCTTCACCCCCGCACCATTACCCCCATCGCCCAGTTCCAGATCCCTTGCCTGATTAAAAATACCGGAAATCCTCAAGCACCAGGTACGCTCATTGGTGCCAGCCGTGATGAAGACGAATTACCGGTCAAGGGCATTTCCAATCTGAATAACATGGCAATGTTCAGCGTTTCTGGTCCGGGGATGAAAGGGATGGTCGGCATGGCGGCGCGCGTCTTTGCAGCGATGTCACGCGCCCGTATTTCCGTGGTGCTGATTACGCAATCATCTTCCGAATACAGCATCAGTTTCTGCGTTCCACAAAGCGACTGTGTGCGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGGCGTCGGTGGCGTTGGCGGTGCGCTGCTGGAGCAACTGAAGCGTCAGCAAAGCTGGCTGAAGAATAAACATATCGACTTACGTGTCTGCGGTGTTGCCAACTCGAAGGCTCTGCTCACCAATGTACATGGCCTTAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGTTATTGAGAACCTGCAAAATCTGCTCAATGCAGGTGATGAATTGATGAAGTTCTCCGGCATTCTTTCTGGTTCGCTTTCTTATATCTTCGGCAAGTTAGACGAAGGCATGAGTTTCTCCGAGGCGACCACGCTGGCGCGGGAAATGGGTTATACCGAACCGGACCCGCGAGATGATCTTTCTGGTATGGATGTGGCGCGTAAACTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTGCCCGCAGAGTTTAACGCCGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAACTCGACGATCTCTTTGCCGCGCGCGTGGCGAAGGCCCGTGATGAAGGAAAAGTTTTGCGCTATGTTGGCAATATTGATGAAGATGGCGTCTGCCGCGTGAAGATTGCCGAAGTGGATGGTAATGATCCGCTGTTCAAAGTGAAAAATGGCGAAAACGCCCTGGCCTTCTATAGCCACTATTATCAGCCGCTGCCGTTGGTACTGCGCGGATATGGTGCGGGCAATGACGTTACAGCTGCCGGTGTCTTTGCTGATCTGCTACGTACCCTCTCATGGAAGTTAGGAGTCTGA", - "dna_sequence_length": 2463, - "functions": [ - "Bifunctional aspartokinase/homoserine dehydrogenase 1" - ], - "id": "CDS_2", - "location": [ - [ - "NC_000913", - 337, - "+", - 2463 - ] - ], - "md5": "20d5afda58d5cfdaa163c62921443e25", - "parent_gene": "", - "protein_md5": "0f66dc2b3024a9739d0e912fde12b8ba", - "protein_translation": "MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKITNHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIKHVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHYLESTVDIAESTRRIAASRIPADHMVLMAGFTAGNEKGELVVLGRNGSDYSAAVLAACLRADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQFQIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAARVFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAVTERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATTGVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKALLTNVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYADFLREGFHVVTPNKKANTSSMDYYHQLRYAAEKSRRKFLYDTNVGAGLPVIENLQNLLNAGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARKLLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEGKVLRYVGNIDEDGVCRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSWKLGV", - "protein_translation_length": 820, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00547" - ], - [ - "gene_synonym", - "b0003" - ], - [ - "gene_synonym", - "EcoGene:EG10999" - ], - [ - "gene_synonym", - "thrB" - ], - [ - "gene_synonym", - "NP_414544.1" - ], - [ - "gene_synonym", - "GI:16127997" - ], - [ - "gene_synonym", - "ASAP:ABE-0000010" - ], - [ - "gene_synonym", - "ECK0003" - ], - [ - "gene_synonym", - "JW0002" - ], - [ - "gene_synonym", - "GeneID:947498" - ] - ], - "dna_sequence": "ATGGTTAAAGTTTATGCCCCGGCTTCCAGTGCCAATATGAGCGTCGGGTTTGATGTGCTCGGGGCGGCGGTGACACCTGTTGATGGTGCATTGCTCGGAGATGTAGTCACGGTTGAGGCGGCAGAGACATTCAGTCTCAACAACCTCGGACGCTTTGCCGATAAGCTGCCGTCAGAACCACGGGAAAATATCGTTTATCAGTGCTGGGAGCGTTTTTGCCAGGAACTGGGTAAGCAAATTCCAGTGGCGATGACCCTGGAAAAGAATATGCCGATCGGTTCGGGCTTAGGCTCCAGTGCCTGTTCGGTGGTCGCGGCGCTGATGGCGATGAATGAACACTGCGGCAAGCCGCTTAATGACACTCGTTTGCTGGCTTTGATGGGCGAGCTGGAAGGCCGTATCTCCGGCAGCATTCATTACGACAACGTGGCACCGTGTTTTCTCGGTGGTATGCAGTTGATGATCGAAGAAAACGACATCATCAGCCAGCAAGTGCCAGGGTTTGATGAGTGGCTGTGGGTGCTGGCGTATCCGGGGATTAAAGTCTCGACGGCAGAAGCCAGGGCTATTTTACCGGCGCAGTATCGCCGCCAGGATTGCATTGCGCACGGGCGACATCTGGCAGGCTTCATTCACGCCTGCTATTCCCGTCAGCCTGAGCTTGCCGCGAAGCTGATGAAAGATGTTATCGCTGAACCCTACCGTGAACGGTTACTGCCAGGCTTCCGGCAGGCGCGGCAGGCGGTCGCGGAAATCGGCGCGGTAGCGAGCGGTATCTCCGGCTCCGGCCCGACCTTGTTCGCTCTGTGTGACAAGCCGGAAACCGCCCAGCGCGTTGCCGACTGGTTGGGTAAGAACTACCTGCAAAATCAGGAAGGTTTTGTTCATATTTGCCGGCTGGATACGGCGGGCGCACGAGTACTGGAAAACTAA", - "dna_sequence_length": 933, - "functions": [ - "homoserine 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- ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00934" - ] - ], - "dna_sequence": "ATGAAACTCTACAATCTGAAAGATCACAACGAGCAGGTCAGCTTTGCGCAAGCCGTAACCCAGGGGTTGGGCAAAAATCAGGGGCTGTTTTTTCCGCACGACCTGCCGGAATTCAGCCTGACTGAAATTGATGAGATGCTGAAGCTGGATTTTGTCACCCGCAGTGCGAAGATCCTCTCGGCGTTTATTGGTGATGAAATCCCACAGGAAATCCTGGAAGAGCGCGTGCGCGCGGCGTTTGCCTTCCCGGCTCCGGTCGCCAATGTTGAAAGCGATGTCGGTTGTCTGGAATTGTTCCACGGGCCAACGCTGGCATTTAAAGATTTCGGCGGTCGCTTTATGGCACAAATGCTGACCCATATTGCGGGTGATAAGCCAGTGACCATTCTGACCGCGACCTCCGGTGATACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCTCTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAATATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGCGTTTGATGATGAAGAACTGAAAGTGGCGCTAGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGTTGCGCAGCTGCCGCAGGAGACGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGGTCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGTTTTATTGCTGCGACCAACGTGAACGATACCGTGCCACGTTTCCTGCACGACGGTCAGTGGTCACCCAAAGCGACTCAGGCGACGTTATCCAACGCGATGGACGTGAGTCAGCCGAACAACTGGCCGCGTGTGGAAGAGTTGTTCCGCCGCAAAATCTGGCAACTGAAAGAGCTGGGTTATGCAGCCGTGGATGATGAAACCACGCAACAGACAATGCGTGAGTTAAAAGAACTGGGCTACACTTCGGAGCCGCACGCTGCCGTAGCTTATCGTGCGCTGCGTGATCAGTTGAATCCAGGCGAATATGGCTTGTTCCTCGGCACCGCGCATCCGGCGAAATTTAAAGAGAGCGTGGAAGCGATTCTCGGTGAAACGTTGGATCTGCCAAAAGAGCTGGCAGAACGTGCTGATTTACCCTTGCTTTCACATAATCTGCCCGCCGATTTTGCTGCGTTGCGTAAATTGATGATGAATCATCAGTAA", 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"EcoGene:EG14384" - ], - [ - "gene_synonym", - "ASAP:ABE-0000015" - ], - [ - "gene_synonym", - "NP_414546.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75616" - ], - [ - "gene_synonym", - "JW0004" - ], - [ - "gene_synonym", - "ECK0005" - ] - ], - "dna_sequence": "GTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGATAGGCGATCGTGATAATCGTGGCTATTACTGGGATGGAGGTCACTGGCGCGACCACGGCTGGTGGAAACAACATTATGAATGGCGAGGCAATCGCTGGCACCTACACGGACCGCCGCCACCGCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAA", - "dna_sequence_length": 297, - "functions": [ - "DUF2502 family putative periplasmic protein" - ], - "id": "CDS_5", - "location": [ - [ - "NC_000913", - 5234, - "+", - 297 - ] - ], - "md5": "2a6bf4c86256b6689661779d4366f0cb", - "parent_gene": "", - "protein_md5": "accd217a526db58f0dc94fad2625013a", - "protein_translation": "MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGDRDNRGYYWDGGHWRDHGWWKQHYEWRGNRWHLHGPPPPPRHHKKAPHDHHGGHGPGKHHR", 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"ATGCTGATTCTTATTTCACCTGCGAAAACGCTTGATTACCAAAGCCCGTTGACCACCACGCGCTATACGCTGCCGGAGCTGTTAGACAATTCCCAGCAGTTGATCCATGAGGCGCGGAAACTGACGCCTCCGCAGATTAGCACGCTGATGCGCATCAGCGACAAACTGGCGGGTATCAACGCCGCTCGCTTTCATGACTGGCAGCCAGATTTCACGCCGGCGAATGCCCGCCAGGCGATTCTGGCGTTTAAAGGTGATGTCTACACCGGCTTGCAGGCCGAAACCTTCAGCGAAGACGATTTCGATTTTGCCCAACAGCATTTGCGAATGCTTTCCGGCTTGTATGGCGTACTCCGCCCGCTCGATTTAATGCAGCCTTATCGTCTGGAAATGGGGATCCGTCTTGAGAATGCCCGAGGGAAAGATCTGTATCAATTCTGGGGAGATATCATCACCAACAAGCTGAACGAGGCGCTCGCAGCACAAGGCGATAATGTGGTGATTAATCTGGCGTCAGATGAGTATTTTAAATCGGTGAAGCCGAAGAAATTGAATGCCGAGATTATCAAGCCGGTGTTCCTCGATGAGAAGAACGGCAAATTTAAGATCATCAGCTTCTACGCTAAGAAAGCACGCGGTCTGATGAGTCGTTTCATTATTGAAAATCGGCTGACCAAACCAGAGCAACTGACTGGTTTTAATAGCGAAGGTTACTTCTTTGATGAAGATTCCTCCAGCAATGGCGAACTGGTGTTTAAACGCTACGAGCAGCGTTAA", - "dna_sequence_length": 777, - "functions": [ - "peroxide resistance protein, lowers intracellular iron" - ], - "id": "CDS_6", - "location": [ - [ - "NC_000913", - 6459, - "-", - 777 - ] - ], - "md5": "526cc558d00c8b6a111dc18ae36caa22", - "parent_gene": "", - "protein_md5": "3918eea8540ab18805c356c3e3096954", - "protein_translation": "MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPPQISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALAAQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR", - "protein_translation_length": 258, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0007" - ], - [ - "gene_synonym", - "EcoGene:EG11555" - ], - [ - "gene_synonym", - "GeneID:944745" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30143" - ], - [ - "gene_synonym", - "GI:16128001" - ], - [ - "gene_synonym", - "NP_414548.1" - ], - [ - "gene_synonym", - "yaaJ" - ], - [ - "gene_synonym", - "JW0006" - ], - [ - "gene_synonym", - "ASAP:ABE-0000020" - ], - [ - "gene_synonym", - "ECK0007" - ] - ], - "dna_sequence": "ATGCCAGATTTTTTCTCCTTCATTAACAGCGTCCTTTGGGGATCGGTAATGATTTACCTGCTCTTCGGCGCAGGTTGTTGGTTCACTTTTCGCACCGGATTTGTGCAGTTTCGCTACATCCGCCAGTTTGGCAAAAGTCTTAAAAATAGCATTCATCCACAGCCAGGCGGTTTAACCTCATTTCAGTCATTGTGTACCAGTCTTGCGGCGCGCGTGGGTAGCGGCAACCTGGCCGGCGTTGCGCTGGCTATTACCGCCGGTGGACCTGGAGCCGTCTTTTGGATGTGGGTTGCCGCGTTTATCGGCATGGCGACCTCGTTTGCCGAATGTTCTCTGGCACAACTTTATAAAGAACGTGACGTCAATGGGCAGTTTCGTGGCGGACCGGCATGGTATATGGCGCGCGGGCTGGGGATGCGCTGGATGGGCGTTCTGTTCGCCGTCTTTTTGCTCATCGCCTATGGCATAATTTTCAGCGGAGTTCAAGCGAACGCCGTTGCCCGCGCCCTGAGTTTTTCTTTTGATTTTCCCCCGCTGGTGACAGGCATTATTCTCGCTGTCTTTACTCTGCTGGCAATCACTCGCGGTCTTCATGGCGTCGCCCGGCTCATGCAGGGCTTTGTCCCGTTGATGGCGATAATCTGGGTACTGACCAGCCTGGTAATTTGCGTAATGAATATCGGGCAACTTCCCCACGTCATTTGGTCTATTTTTGAGAGTGCTTTTGGCTGGCAGGAAGCGGCAGGCGGCGCGGCGGGATATACCTTAAGCCAGGCGATTACTAACGGTTTTCAGCGCAGTATGTTTTCCAATGAGGCGGGAATGGGTTCGACGCCAAACGCGGCAGCGGCAGCGGCGTCCTGGCCTCCGCATCCGGCAGCGCAAGGGATTGTCCAGATGATTGGCATTTTTATCGACACCCTGGTCATCTGTACGGCAAGCGCCATGCTGATATTACTGGCGGGTAACGGCACAACCTACATGCCGCTGGAAGGTATTCAGCTTATCCAGAAGGCGATGCGGGTGCTAATGGGTTCCTGGGGTGCTGAGTTTGTTACCCTTGTGGTTATTCTGTTTGCCTTCAGCTCCATCGTTGCCAACTACATTTATGCCGAAAACAATCTCTTCTTTTTACGCCTGAACAACCCTAAAGCGATCTGGTGTTTGCGGATCTGCACCTTCGCAACGGTCATCGGCGGCACCTTGCTAAGCCTTCCGCTGATGTGGCAACTGGCAGATATCATAATGGCCTGCATGGCTATTACCAATTTGACCGCCATTTTACTGCTCTCGCCTGTGGTTCATACCATTGCCAGTGATTATCTACGCCAGCGTAAACTCGGCGTGCGCCCGGTGTTTGATCCATTGCGTTATCCGGATATCGGTCGCCAGCTTTCTCCGGACGCGTGGGATGATGTTTCGCAGGAGTAA", 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"UniProtKB/Swiss-Prot:P0A870" - ], - [ - "gene_synonym", - "GeneID:944748" - ], - [ - "gene_synonym", - "b0008" - ], - [ - "gene_synonym", - "ECK0008" - ], - [ - "gene_synonym", - "yaaK" - ], - [ - "gene_synonym", - "talB" - ], - [ - "gene_synonym", - "JW0007" - ], - [ - "gene_synonym", - "GI:16128002" - ], - [ - "gene_synonym", - "ASAP:ABE-0000027" - ] - ], - "dna_sequence": "ATGACGGACAAATTGACCTCCCTTCGTCAGTACACCACCGTAGTGGCCGACACTGGGGACATCGCGGCAATGAAGCTGTATCAACCGCAGGATGCCACAACCAACCCTTCTCTCATTCTTAACGCAGCGCAGATTCCGGAATACCGTAAGTTGATTGATGATGCTGTCGCCTGGGCGAAACAGCAGAGCAACGATCGCGCGCAGCAGATCGTGGACGCGACCGACAAACTGGCAGTAAATATTGGTCTGGAAATCCTGAAACTGGTTCCGGGCCGTATCTCAACTGAAGTTGATGCGCGTCTTTCCTATGACACCGAAGCGTCAATTGCGAAAGCAAAACGCCTGATCAAACTCTACAACGATGCTGGTATTAGCAACGATCGTATTCTGATCAAACTGGCTTCTACCTGGCAGGGTATCCGTGCTGCAGAACAGCTGGAAAAAGAAGGCATCAACTGTAACCTGACCCTGCTGTTCTCCTTCGCTCAGGCTCGTGCTTGTGCGGAAGCGGGCGTGTTCCTGATCTCGCCGTTTGTTGGCCGTATTCTTGACTGGTACAAAGCGAATACCGATAAGAAAGAGTACGCTCCGGCAGAAGATCCGGGCGTGGTTTCTGTATCTGAAATCTACCAGTACTACAAAGAGCACGGTTATGAAACCGTGGTTATGGGCGCAAGCTTCCGTAACATCGGCGAAATTCTGGAACTGGCAGGCTGCGACCGTCTGACCATCGCACCGGCACTGCTGAAAGAGCTGGCGGAGAGCGAAGGGGCTATCGAACGTAAACTGTCTTACACCGGCGAAGTGAAAGCGCGTCCGGCGCGTATCACTGAGTCCGAGTTCCTGTGGCAGCACAACCAGGATCCAATGGCAGTAGATAAACTGGCGGAAGGTATCCGTAAGTTTGCTATTGACCAGGAAAAACTGGAAAAAATGATCGGCGATCTGCTGTAA", - "dna_sequence_length": 954, - "functions": [ - "transaldolase B" - ], - "id": "CDS_8", - "location": [ - [ - "NC_000913", - 8238, - "+", - 954 - ] - ], - "md5": "abd597c891b73e1f68899f477df7fd4c", - "parent_gene": "", - "protein_md5": "8bc41f8b7a091d5894e5f48e87ab5611", - "protein_translation": "MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPARITESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL", - "protein_translation_length": 317, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944760" - ], - [ - "gene_synonym", - "NP_414550.1" - ], - [ - "gene_synonym", - "chlG" - ], - [ - "gene_synonym", - "EcoGene:EG11511" - ], - [ - "gene_synonym", - "ECK0009" - ], - [ - "gene_synonym", - "b0009" - ], - [ - "gene_synonym", - "JW0008" - ], - [ - "gene_synonym", - "mogA" - ], - [ - "gene_synonym", - "bisD" - ], - [ - "gene_synonym", - "GI:16128003" - ], - [ - "gene_synonym", - "mog" - ], - [ - "gene_synonym", - "ASAP:ABE-0000030" - ], - [ - "gene_synonym", - "yaaG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF03" - ] - ], - "dna_sequence": "ATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGCGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGCGGAACTGGCCCGGCGCGTCGTGACGTAACGCCCGATGCGACGCTGGCAGTAGCGGACCGCGAGATGCCTGGCTTTGGTGAACAGATGCGCCAGATCAGCCTGCATTTTGTACCAACTGCGATCCTTTCGCGTCAGGTGGGCGTGATTCGCAAACAGGCGCTGATCCTTAACTTACCCGGTCAGCCGAAGTCTATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTGAGGGTAACGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCGGAAGTGGTTGCAGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAA", - "dna_sequence_length": 588, - "functions": [ - "molybdochelatase incorporating molybdenum into molybdopterin" - ], - "id": "CDS_9", - "location": [ - [ - "NC_000913", - 9306, - "+", - 588 - ] - ], - "md5": "0a32665ee7a8d0032397827c549f3452", - "parent_gene": "", - "protein_md5": "3d21682c3229e2736a6f4ff872d59326", - "protein_translation": "MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAEGNVVVHGIFASVPYCIQLLEGPYVETAPEVVAAFRPKSARRDVSE", - "protein_translation_length": 195, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "satP" - ], - [ - "gene_synonym", - "b0010" - ], - [ - "gene_synonym", - "NP_414551.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC98" - ], - [ - "gene_synonym", - "GI:16128004" - ], - [ - "gene_synonym", - "GeneID:944792" - ], - [ - "gene_synonym", - "yaaH" - ], - [ - "gene_synonym", - "EcoGene:EG11512" - ], - [ - "gene_synonym", - "JW0009" - ], - [ - "gene_synonym", - "ECK0010" - ], - [ - "gene_synonym", - "ASAP:ABE-0000032" - ] - ], - "dna_sequence": "ATGGGCAACACTAAGTTGGCTAATCCGGCACCGCTGGGCCTGATGGGCTTCGGCATGACCACCATTCTGCTTAACCTGCACAACGTGGGTTATTTCGCTCTGGACGGTATTATTCTTGCCATGGGCATTTTCTACGGCGGCATCGCGCAAATTTTTGCTGGTCTGCTGGAGTACAAAAAAGGCAACACTTTCGGTTTAACCGCATTCACCTCTTACGGTTCTTTCTGGCTGACGCTGGTTGCGATTCTGCTGATGCCGAAACTGGGTCTGACCGATGCGCCAAATGCACAGTTCCTTGGTGTCTACCTGGGTCTGTGGGGCGTATTTACGCTGTTTATGTTCTTCGGCACGCTGAAAGGCGCACGCGTTCTGCAATTCGTTTTCTTTAGCCTGACCGTGCTGTTTGCCCTGCTGGCGATCGGTAACATTGCCGGTAACGCCGCAATCATCCACTTTGCCGGCTGGATTGGGCTGATCTGCGGTGCCAGCGCAATCTATCTGGCGATGGGTGAAGTACTGAACGAGCAGTTTGGTCGCACCGTTCTGCCGATTGGTGAATCCCACTAA", - "dna_sequence_length": 567, - "functions": [ - "succinate-acetate transporter" - ], - "id": "CDS_10", - "location": [ - [ - "NC_000913", - 10494, - "-", - 567 - ] - ], - "md5": "b750a95e4f19611bb8c4f7f86901572d", - "parent_gene": "", - "protein_md5": "f8cecc10df7ed11bb9a851ffecbbd625", - "protein_translation": "MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIFYGGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVYLGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLICGASAIYLAMGEVLNEQFGRTVLPIGESH", - "protein_translation_length": 188, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0011" - ], - [ - "gene_synonym", - "GeneID:944771" - ], - [ - "gene_synonym", - "GI:16128005" - ], - [ - "gene_synonym", - "NP_414552.1" - ], - [ - "gene_synonym", - "yaaW" - ], - [ - "gene_synonym", - "JW0010" - ], - [ - "gene_synonym", - "EcoGene:EG14340" - ], - [ - "gene_synonym", - "ECK0011" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75617" - ], - [ - "gene_synonym", - "ASAP:ABE-0000037" - ] - ], - "dna_sequence": "ATGAATGTTAATTACCTGAATGATTCAGATCTGGATTTTCTTCAGCATTGTAGTGAGGAACAGTTGGCAAATTTCGCCCGATTGCTCACCCATAATGAAAAAGGCAAAACTCGCCTCTCCAGCGTACTGATGCGCAACGAACTGTTTAAATCGATGGAAGGGCATCCCGAGCAACATCGCCGCAACTGGCAGCTGATTGCCGGAGAATTACAGCATTTTGGTGGCGATAGTATCGCCAACAAACTGCGCGGACACGGTAAATTGTATCGGGCCATTTTGCTCGATGTTTCAAAGCGATTGAAGCTGAAAGCCGACAAAGAGATGTCTACGTTTGAAATTGAGCAACAGTTACTGGAACAATTTCTGCGTAATACCTGGAAGAAAATGGACGAGGAACATAAGCAGGAGTTTCTGCACGCGGTCGATGCCAGGGTGAATGAGCTGGAAGAGCTGCTGCCGCTGCTGATGAAAGACAAATTATTGGCAAAAGGTGTGTCGCATTTGCTTTCCAGCCAACTGACCCGCATTTTACGCACCCACGCAGCAATGAGCGTACTTGGGCATGGTTTGCTGCGCGGCGCGGGGCTGGGAGGCCCTGTAGGTGCGGCACTAAATGGGGTTAAAGCGGTCAGCGGCAGCGCCTATCGCGTGACGATTCCAGCCGTACTGCAAATCGCCTGCCTGCGCCGGATGGTTAGCGCCACTCAGGTCTGA", - "dna_sequence_length": 714, - "functions": [ - "UPF0174 family protein" - ], - "id": "CDS_11", - "location": [ - [ - "NC_000913", - 11356, - "-", - 714 - ] - ], - "md5": "f1994d506b5d8835a3749de790dbf2de", - "parent_gene": "", - "protein_md5": "6cb49aa3c311912db142bd13461f7cd2", - "protein_translation": "MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSVLMRNELFKSMEGHPEQHRRNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKLKADKEMSTFEIEQQLLEQFLRNTWKKMDEEHKQEFLHAVDARVNELEELLPLLMKDKLLAKGVSHLLSSQLTRILRTHAAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSAYRVTIPAVLQIACLRRMVSATQV", - "protein_translation_length": 237, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0013" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28696" - ], - [ - "gene_synonym", - "GI:16128007" - ], - [ - "gene_synonym", - "ASAP:ABE-0000043" - ], - [ - "gene_synonym", - "NP_414554.1" - ], - [ - "gene_synonym", - "GeneID:944751" - ], - [ - "gene_synonym", - "yaaI" - ], - [ - "gene_synonym", - "JW0012" - ], - [ - "gene_synonym", - "ECK0013" - ], - [ - "gene_synonym", - "EcoGene:EG11513" - ] - ], - "dna_sequence": "ATGAAATCCGTTTTTACGATTTCCGCCAGCCTGGCGATTAGCCTGATGCTGTGCTGCACGGCGCAGGCAAACGACCATAAACTCCTCGGCGCCATTGCAATGCCGCGTAACGAAACCAACGATCTGGCGCTGAAACTTCCTGTTTGTCGCATTGTGAAACGCATACAACTCTCTGCCGACCATGGCGATTTACAGTTAAGCGGTGCATCGGTTTATTTCAAAGCCGCCCGTAGCGCCAGTCAGAGCCTGAATATTCCTTCAGAAATAAAAGAAGGGCAAACCACTGACTGGATCAACATTAACAGCGATAACGACAATAAACGCTGCGTCTCAAAAATCACCTTTTCGGGTCATACGGTGAACTCATCGGATATGGCCACGCTGAAAATTATCGGCGACGACTAA", - "dna_sequence_length": 405, - "functions": [ - "UPF0412 family protein" - ], - "id": "CDS_12", - "location": [ - [ - "NC_000913", - 11786, - "-", - 405 - ] - ], - "md5": "021e705c61a3b5e3580325ff245ceb65", - "parent_gene": "", - "protein_md5": "d612bbf7ee4e74b80a7a6e2d0db5c40e", - "protein_translation": "MKSVFTISASLAISLMLCCTAQANDHKLLGAIAMPRNETNDLALKLPVCRIVKRIQLSADHGDLQLSGASVYFKAARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHTVNSSDMATLKIIGDD", - "protein_translation_length": 134, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0014" - ], - [ - "gene_synonym", - "GI:16128008" - ], - [ - "gene_synonym", - "grpC" - ], - [ - "gene_synonym", - "ASAP:ABE-0000052" - ], - [ - "gene_synonym", - "grpF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6Y8" - ], - [ - "gene_synonym", - "seg" - ], - [ - "gene_synonym", - "GeneID:944750" - ], - [ - "gene_synonym", - "JW0013" - ], - [ - "gene_synonym", - "groPAB" - ], - [ - "gene_synonym", - "EcoGene:EG10241" - ], - [ - "gene_synonym", - "groPF" - ], - [ - "gene_synonym", - "dnaK" - ], - [ - "gene_synonym", - "NP_414555.1" - ], - [ - "gene_synonym", - "groPC" - ], - [ - "gene_synonym", - "ECK0014" - ] - ], - "dna_sequence": "ATGGGTAAAATAATTGGTATCGACCTGGGTACTACCAACTCTTGTGTAGCGATTATGGATGGCACCACTCCTCGCGTGCTGGAGAACGCCGAAGGCGATCGCACCACGCCTTCTATCATTGCCTATACCCAGGATGGTGAAACTCTAGTTGGTCAGCCGGCTAAACGTCAGGCAGTGACGAACCCGCAAAACACTCTGTTTGCGATTAAACGCCTGATTGGTCGCCGCTTCCAGGACGAAGAAGTACAGCGTGATGTTTCCATCATGCCGTTCAAAATTATTGCTGCTGATAACGGCGACGCATGGGTCGAAGTTAAAGGCCAGAAAATGGCACCGCCGCAGATTTCTGCTGAAGTGCTGAAAAAAATGAAGAAAACCGCTGAAGATTACCTGGGTGAACCGGTAACTGAAGCTGTTATCACCGTACCGGCATACTTTAACGATGCTCAGCGTCAGGCAACCAAAGACGCAGGCCGTATCGCTGGTCTGGAAGTAAAACGTATCATCAACGAACCGACCGCAGCTGCGCTGGCTTACGGTCTGGACAAAGGCACTGGCAACCGTACTATCGCGGTTTATGACCTGGGTGGTGGTACTTTCGATATTTCTATTATCGAAATCGACGAAGTTGACGGCGAAAAAACCTTCGAAGTTCTGGCAACCAACGGTGATACCCACCTGGGGGGTGAAGACTTCGACAGCCGTCTGATCAACTATCTGGTTGAAGAATTCAAGAAAGATCAGGGCATTGACCTGCGCAACGATCCGCTGGCAATGCAGCGCCTGAAAGAAGCGGCAGAAAAAGCGAAAATCGAACTGTCTTCCGCTCAGCAGACCGACGTTAACCTGCCATACATCACTGCAGACGCGACCGGTCCGAAACACATGAACATCAAAGTGACTCGTGCGAAACTGGAAAGCCTGGTTGAAGATCTGGTAAACCGTTCCATTGAGCCGCTGAAAGTTGCACTGCAGGACGCTGGCCTGTCCGTATCTGATATCGACGACGTTATCCTCGTTGGTGGTCAGACTCGTATGCCAATGGTTCAGAAGAAAGTTGCTGAGTTCTTTGGTAAAGAGCCGCGTAAAGACGTTAACCCGGACGAAGCTGTAGCAATCGGTGCTGCTGTTCAGGGTGGTGTTCTGACTGGTGACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGTGAACGTAAACGTGCGGCTGATAACAAATCTCTGGGTCAGTTCAACCTAGATGGTATCAACCCGGCACCGCGCGGCATGCCGCAGATCGAAGTTACCTTCGATATCGATGCTGACGGTATCCTGCACGTTTCCGCGAAAGATAAAAACAGCGGTAAAGAGCAGAAGATCACCATCAAGGCTTCTTCTGGTCTGAACGAAGATGAAATCCAGAAAATGGTACGCGACGCAGAAGCTAACGCCGAAGCTGACCGTAAGTTTGAAGAGCTGGTACAGACTCGCAACCAGGGCGACCATCTGCTGCACAGCACCCGTAAGCAGGTTGAAGAAGCAGGCGACAAACTGCCGGCTGACGACAAAACTGCTATCGAGTCTGCGCTGACTGCACTGGAAACTGCTCTGAAAGGTGAAGACAAAGCCGCTATCGAAGCGAAAATGCAGGAACTGGCACAGGTTTCCCAGAAACTGATGGAAATCGCCCAGCAGCAACATGCCCAGCAGCAGACTGCCGGTGCTGATGCTTCTGCAAACAACGCGAAAGATGACGATGTTGTCGACGCTGAATTTGAAGAAGTCAAAGACAAAAAATAA", - "dna_sequence_length": 1917, - "functions": [ - "chaperone Hsp70, with co-chaperone DnaJ" - ], - "id": "CDS_13", - "location": [ - [ - "NC_000913", - 12163, - "+", - 1917 - ] - ], - "md5": "fe07f741d6a22cd2322332dfb45fe97a", - "parent_gene": "", - "protein_md5": "0d39280bf6256e4ebfb5b40449c56b29", - "protein_translation": "MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDDDVVDAEFEEVKDKK", - "protein_translation_length": 638, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414556.1" - ], - [ - "gene_synonym", - "dnaJ" - ], - [ - "gene_synonym", - "GI:16128009" - ], - [ - "gene_synonym", - "b0015" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08622" - ], - [ - "gene_synonym", - "grpC" - ], - [ - "gene_synonym", - "ASAP:ABE-0000054" - ], - [ - "gene_synonym", - "JW0014" - ], - [ - "gene_synonym", - "EcoGene:EG10240" - ], - [ - "gene_synonym", - "groP" - ], - [ - "gene_synonym", - "faa" - ], - [ - "gene_synonym", - "ECK0015" - ], - [ - "gene_synonym", - "GeneID:944753" - ] - ], - "dna_sequence": "ATGGCTAAGCAAGATTATTACGAGATTTTAGGCGTTTCCAAAACAGCGGAAGAGCGTGAAATCAGAAAGGCCTACAAACGCCTGGCCATGAAATACCACCCGGACCGTAACCAGGGTGACAAAGAGGCCGAGGCGAAATTTAAAGAGATCAAGGAAGCTTATGAAGTTCTGACCGACTCGCAAAAACGTGCGGCATACGATCAGTATGGTCATGCTGCGTTTGAGCAAGGTGGCATGGGCGGCGGCGGTTTTGGCGGCGGCGCAGACTTCAGCGATATTTTTGGTGACGTTTTCGGCGATATTTTTGGCGGCGGACGTGGTCGTCAACGTGCGGCGCGCGGTGCTGATTTACGCTATAACATGGAGCTCACCCTCGAAGAAGCTGTACGTGGCGTGACCAAAGAGATCCGCATTCCGACTCTGGAAGAGTGTGACGTTTGCCACGGTAGCGGTGCAAAACCAGGTACACAGCCGCAGACTTGTCCGACCTGTCATGGTTCTGGTCAGGTGCAGATGCGCCAGGGATTCTTCGCTGTACAGCAGACCTGTCCACACTGTCAGGGCCGCGGTACGCTGATCAAAGATCCGTGCAACAAATGTCATGGTCATGGTCGTGTTGAGCGCAGCAAAACGCTGTCCGTTAAAATCCCGGCAGGGGTGGACACTGGAGACCGCATCCGTCTTGCGGGCGAAGGTGAAGCGGGCGAGCATGGCGCACCGGCAGGCGATCTGTACGTTCAGGTTCAGGTTAAACAGCACCCGATTTTCGAGCGTGAAGGCAACAACCTGTATTGCGAAGTCCCGATCAACTTCGCTATGGCGGCGCTGGGTGGCGAAATCGAAGTACCGACCCTTGATGGTCGCGTCAAACTGAAAGTGCCTGGCGAAACCCAGACCGGTAAGCTATTCCGTATGCGCGGTAAAGGCGTCAAGTCTGTCCGCGGTGGCGCACAGGGTGATTTGCTGTGCCGCGTTGTCGTCGAAACACCGGTAGGCCTGAACGAAAGGCAGAAACAGCTGCTGCAAGAGCTGCAAGAAAGCTTCGGTGGCCCAACCGGCGAGCACAACAGCCCGCGCTCAAAGAGCTTCTTTGATGGTGTGAAGAAGTTTTTTGACGACCTGACCCGCTAA", - "dna_sequence_length": 1131, - "functions": [ - "chaperone Hsp40, DnaK co-chaperone" - ], - "id": "CDS_14", - "location": [ - [ - "NC_000913", - 14168, - "+", - 1131 - ] - ], - "md5": "55196655c404d4a0166d91689297bf38", - "parent_gene": "", - "protein_md5": "f5147ac0d118b474783edf1f4d673e67", - "protein_translation": "MAKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPAGVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLNERQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR", - "protein_translation_length": 376, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128010" - ], - [ - "gene_synonym", - "ASAP:ABE-0000058" - ], - [ - "gene_synonym", - "b0016" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF91" - ], - [ - "gene_synonym", - "insL1" - ], - [ - "gene_synonym", - "NP_414557.1" - ], - [ - "gene_synonym", - "EcoGene:EG40012" - ], - [ - "gene_synonym", - "GeneID:944754" - ], - [ - "gene_synonym", - "ECK0016" - ] - ], - "dna_sequence": "ATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCTGAAGCGGCTGCGGAATGCCGCCGACTGGTTTGGCATACTTGCCGCACAAACACTTGCTGTACGCGCCGCAGTTACGGGTTGTACAAGCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGGCGGCAGCGCTGAATGGCGACTACATATGGGATATGATCCTCATACCTGTCAGTTCACTGATTTTGAGCTAACCGACAGCAGAGACGCTGAACGGCTGGACCGATTTGCGCAAACGGCAGACGAGATACGCATTGCTGACCGGGGATTCGGTTCGCGTCCCGAATGTATCCGCTCACTTGCTTTTGGAGAAGCTGATTATATCGTCCGGGTTCACTGGCGAGGATTGCGCTGGTTAACTGCAGAAGGAATGCGCTTTGACATGATGGGTTTTCTGCGCGGGCTGGATTGCGGTAAGAACGGTGAAACCACTGTAATGATAGGCAATTCAGGTAATAAAAAAGCCGGAGCTCCCTTTCCGGCACGTCTCATTGCCGTATCACTTCCTCCCGAAAAAGCATTAATCAGTAAAACCCGACTGCTCAGCGAGAATCGTCGAAAAGGACGAGTAGTTCAGGCGGAAACGCTGGAAGCAGCGGGCCATGTGCTATTGCTAACATCATTACCGGAAGATGAATATTCAGCAGAGCAAGTGGCTGATTGTTACCGTCTGCGATGGCAAATTGAACTGGCTTTTAAGCGGCTCAAAAGTTTGCTGCACCTGGATGCTTTGCGTGCAAAGGAACCTGAACTCGCGAAAGCGTGGATATTTGCTAATCTACTCGCCGCATTTTTAATTGACGACATAATCCAGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAA", - "dna_sequence_length": 1113, - "functions": [ - "IS186 transposase" - ], - "id": "CDS_15", - "location": [ - [ - "NC_000913", - 15445, - "+", - 1113 - ] - ], - "md5": "3fce9c70c9584709b648ad88256d7bb8", - "parent_gene": "", - "protein_md5": "4dc27d1a21f12988eb2f603aa2b9828d", - "protein_translation": "MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN", - "protein_translation_length": 370, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128012" - ], - [ - "gene_synonym", - "NP_414559.1" - ], - [ - "gene_synonym", - "b0018" - ], - [ - "gene_synonym", - "gefL" - ], - [ - "gene_synonym", - "ECK4466" - ], - [ - "gene_synonym", - "EcoGene:EG12074" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33236" - ], - [ - "gene_synonym", - "GeneID:944756" - ], - [ - "gene_synonym", - "ASAP:ABE-0000064" - ], - [ - "gene_synonym", - "mokC" - ] - ], - "dna_sequence": "ATGCTGAACACATGTAGAGTGCCTCTTACTGACCGTAAGGTCAAGGAGAAGAGAGCAATGAAGCAGCATAAGGCGATGATTGTCGCCCTGATCGTCATCTGTATCACCGCCGTAGTGGCGGCGCTGGTAACGAGAAAAGACCTCTGTGAGGTTCACATCCGAACTGGCCAGACGGAGGTTGCTGTTTTCACGGCTTACGAATCCGAGTAA", - "dna_sequence_length": 210, - "functions": [ - "regulatory protein for HokC, overlaps CDS of hokC" - ], - "id": "CDS_16", - "location": [ - [ - "NC_000913", - 16960, - "-", - 210 - ] - ], - "md5": "b69e96bad5ffd7084a930c02d5197a5d", - "parent_gene": "", - "protein_md5": "654ba6a95360f88a6a7db06a208f9c6a", - "protein_translation": "MLNTCRVPLTDRKVKEKRAMKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE", - "protein_translation_length": 69, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:2847744" - ], - [ - "gene_synonym", - "YP_025292.1" - ], - [ - "gene_synonym", - "hokC" - ], - [ - "gene_synonym", - "b4412" - ], - [ - "gene_synonym", - "ECK0018" - ], - [ - "gene_synonym", - "GI:49175991" - ], - [ - "gene_synonym", - "gef" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACG4" - ], - [ - "gene_synonym", - "JW5879" - ], - [ - "gene_synonym", - "ASAP:ABE-0047278" - ], - [ - "gene_synonym", - "EcoGene:EG10373" - ] - ], - "dna_sequence": "ATGAAGCAGCATAAGGCGATGATTGTCGCCCTGATCGTCATCTGTATCACCGCCGTAGTGGCGGCGCTGGTAACGAGAAAAGACCTCTGTGAGGTTCACATCCGAACTGGCCAGACGGAGGTTGCTGTTTTCACGGCTTACGAATCCGAGTAA", - "dna_sequence_length": 153, - "functions": [ - "toxic membrane protein, small" - ], - "id": "CDS_17", - "location": [ - [ - "NC_000913", - 16903, - "-", - 153 - ] - ], - "md5": "989fc5ff4d3c41ea58f3406b6e431954", - "parent_gene": "", - "protein_md5": "c927f27b99759a392fc3d10a68011412", - "protein_translation": "MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE", - "protein_translation_length": 50, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ant" - ], - [ - "gene_synonym", - "ECK0020" - ], - [ - "gene_synonym", - "ASAP:ABE-0000068" - ], - [ - "gene_synonym", - "GI:16128013" - ], - [ - "gene_synonym", - "b0019" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P13738" - ], - [ - "gene_synonym", - "nhaA" - ], - [ - "gene_synonym", - "GeneID:944758" - ], - [ - "gene_synonym", - "JW0018" - ], - [ - "gene_synonym", - "antA" - ], - [ - "gene_synonym", - "EcoGene:EG10652" - ], - [ - "gene_synonym", - "NP_414560.1" - ] - ], - "dna_sequence": "GTGAAACATCTGCATCGATTCTTTAGCAGTGATGCCTCGGGAGGCATTATTCTTATCATTGCCGCTATCCTGGCGATGATTATGGCCAACAGCGGCGCAACCAGTGGATGGTATCACGACTTTCTGGAGACGCCGGTTCAGCTCCGGGTTGGTTCACTCGAAATCAACAAAAACATGCTGTTATGGATAAATGACGCGCTGATGGCGGTATTTTTCCTGTTAGTCGGTCTGGAAGTTAAACGTGAACTGATGCAAGGATCGCTAGCCAGCTTACGCCAGGCCGCATTTCCAGTTATCGCCGCTATTGGTGGGATGATTGTGCCGGCATTACTCTATCTGGCTTTTAACTATGCCGATCCGATTACCCGCGAAGGGTGGGCGATCCCGGCGGCTACTGACATTGCTTTTGCACTTGGTGTACTGGCGCTGTTGGGAAGTCGTGTTCCGTTAGCGCTGAAGATCTTTTTGATGGCTCTGGCTATTATCGACGATCTTGGGGCCATCATTATCATCGCATTGTTCTACACTAATGACTTATCGATGGCCTCTCTTGGCGTCGCGGCTGTAGCAATTGCGGTACTCGCGGTATTGAATCTGTGTGGTGCACGCCGCACGGGCGTCTATATTCTTGTTGGCGTGGTGTTGTGGACTGCGGTGTTGAAATCGGGGGTTCACGCAACTCTGGCGGGGGTAATTGTCGGCTTCTTTATTCCTTTGAAAGAGAAGCATGGGCGTTCTCCAGCGAAGCGACTGGAGCATGTGTTGCACCCGTGGGTGGCGTATCTGATTTTGCCGCTGTTTGCATTTGCTAATGCTGGCGTTTCACTGCAAGGCGTCACGCTGGATGGCTTGACCTCCATTCTGCCATTGGGGATCATCGCTGGCTTGCTGATTGGCAAACCGCTGGGGATTAGTCTGTTCTGCTGGTTGGCGCTGCGTTTGAAACTGGCGCATCTGCCTGAGGGAACGACTTATCAGCAAATTATGGTGGTGGGGATCCTGTGCGGTATCGGTTTTACTATGTCTATCTTTATTGCCAGCCTGGCCTTTGGTAGCGTAGATCCAGAACTGATTAACTGGGCGAAACTCGGTATCCTGGTCGGTTCTATCTCTTCGGCGGTAATTGGATACAGCTGGTTACGCGTTCGTTTGCGTCCATCAGTTTGA", 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- "gene_synonym", - "ECK0021" - ], - [ - "gene_synonym", - "ASAP:ABE-0000072" - ], - [ - "gene_synonym", - "JW0019" - ], - [ - "gene_synonym", - "b0020" - ], - [ - "gene_synonym", - "yaaB" - ], - [ - "gene_synonym", - "GeneID:944757" - ], - [ - "gene_synonym", - "EcoGene:EG11078" - ] - ], - "dna_sequence": "ATGAGCATGTCTCATATCAATTACAACCACTTGTATTACTTCTGGCATGTCTATAAAGAAGGTTCCGTGGTTGGCGCAGCGGAGGCGCTTTATTTAACTCCACAAACCATTACCGGACAGATTCGAGCGCTGGAAGAGCGCCTGCAAGGCAAATTATTTAAACGCAAGGGACGTGGTCTCGAACCCAGCGAGCTGGGAGAACTGGTCTATCGCTATGCCGATAAAATGTTCACCTTAAGCCAGGAAATGCTGGATATTGTGAACTATCGCAAAGAATCCAATTTATTGTTTGACGTTGGCGTGGCTGATGCACTTTCCAAACGCCTGGTCAGTAGCGTACTTAACGCCGCAGTGGTAGAAGGCGAGCCCATTCATCTTCGCTGCTTCGAATCCACCCACGAAATGCTGCTGGAGCAATTAAGTCAGCATAAACTGGATATGATCATTTCTGACTGTCCGATAGACTCTACGCAGCAGGAAGGCCTGTTCTCCGTGAGAATTGGCGAATGTGGCGTGAGTTTCTGGTGTACAAATCCACCACCAGAAAAACCGTTCCCGGCTTGTCTGGAAGAACGGCGACTTTTGATTCCTGGGCGACGTTCAATGTTAGGGCGCAAATTGCTTAACTGGTTTAACTCCCAGGGATTAAACGTAGAAATCCTCGGCGAGTTTGATGATGCCGCTTTGATGAAAGCTTTTGGTGCGATGCACAATGCAATCTTCGTTGCCCCAACGCTTTATGCATATGACTTTTATGCCGATAAAACTGTCGTAGAAATTGGTCGCGTCGAGAATGTGATGGAAGAGTACCATGCTATTTTTGCTGAGCGGATGATTCAGCACCCGGCGGTACAGCGAATCTGCAATACGGATTATTCTGCGCTTTTTAGTCCAGCGGTGCGTTAA", - "dna_sequence_length": 906, - "functions": [ - "transcriptional activator of nhaA" - ], 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"UniProtKB/Swiss-Prot:P0CF25" - ] - ], - "dna_sequence": "ATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGTCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA", - "dna_sequence_length": 504, - "functions": [ - "IS1 transposase B" - ], - "id": "CDS_20", - "location": [ - [ - "NC_000913", - 20314, - "-", - 504 - ] - ], - "md5": "9b3b0a523236fbbb94e9a150e2349e7c", - "parent_gene": "", - "protein_md5": "a7ce8c3d73c6cbaea2dc673889ba240c", - "protein_translation": "MPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414563.1" - ], - [ - "gene_synonym", - "insA" - ], - [ - "gene_synonym", - "GI:16128016" - ], - [ - "gene_synonym", - "ECK0023" - ], - [ - "gene_synonym", - "EcoGene:EG40001" - ], - [ - "gene_synonym", - "GeneID:948449" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF07" - ], - [ - "gene_synonym", - "ASAP:ABE-0000078" - ], - [ - "gene_synonym", - "b0022" - ] - ], - "dna_sequence": "GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA", - "dna_sequence_length": 276, - "functions": [ - "IS1 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"UniProtKB/Swiss-Prot:P75620" - ], - [ - "gene_synonym", - "ASAP:ABE-0000089" - ], - [ - "gene_synonym", - "GeneID:949128" - ], - [ - "gene_synonym", - "b0024" - ], - [ - "gene_synonym", - "NP_414565.1" - ] - ], - "dna_sequence": "ATGTGCCGGCACTCGTTACGTAGTGATGGCGCAGGATTCTACCAGCTTGCGGGGTGTGAATACAGCTTTTCCGCGATAAAAATTGCAGCAGGCGGTCAGTTTCTTCCCGTGATTTGCGCCATGGCAATGAAAAGCCACTTCTTTCTGATTTCGGTACTCAATCGCCGGTTAACCTTGACCGCTGTACAAGGTATACTCGGACGATTTTCACTGTTTTGA", - "dna_sequence_length": 219, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_23", - "location": [ - [ - "NC_000913", - 21181, - "+", - 219 - ] - ], - "md5": "632d9c89eeed63443296c35601b7374a", - "parent_gene": "", - "protein_md5": "ba6191e60d52aa485969dd92928859eb", - "protein_translation": "MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGQFLPVICAMAMKSHFFLISVLNRRLTLTAVQGILGRFSLF", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:949129" - ], - [ - "gene_synonym", - "ECK0026" - ], - [ - "gene_synonym", - "NP_414566.1" - ], - [ - "gene_synonym", - "GI:16128019" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG40" - ], - [ - "gene_synonym", - "JW0023" - ], - [ - "gene_synonym", - "yaaC" - ], - [ - "gene_synonym", - "EcoGene:EG11079" - ], - [ - "gene_synonym", - "b0025" - ], - [ - "gene_synonym", - "ASAP:ABE-0000091" - ], - [ - "gene_synonym", - "ribF" - ] - ], - "dna_sequence": 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"bifunctional riboflavin kinase/FAD synthetase" - ], - "id": "CDS_24", - "location": [ - [ - "NC_000913", - 21407, - "+", - 942 - ] - ], - "md5": "ade7634f5413fa6471ff64467a3b820e", - "parent_gene": "", - "protein_md5": "25ec4f764e87614d7859601d579758d8", - "protein_translation": "MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA", - "protein_translation_length": 313, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00956" - ], - [ - "gene_synonym", - "GeneID:944761" - ], - [ - "gene_synonym", - "ECK0027" - ], - [ - "gene_synonym", - "GI:16128020" - ], - [ - "gene_synonym", - "NP_414567.1" - ], - [ - "gene_synonym", - "ilvS" - ], - [ - "gene_synonym", - "JW0024" - ], - [ - "gene_synonym", - "EcoGene:EG10492" - ], - [ - "gene_synonym", - "ileS" - ], - [ - "gene_synonym", - "ASAP:ABE-0000094" - ], - [ - "gene_synonym", - "b0026" - ] - ], - "dna_sequence": "ATGAGTGACTATAAATCAACCCTGAATTTGCCGGAAACAGGGTTCCCGATGCGTGGCGATCTCGCCAAGCGCGAACCCGGAATGCTGGCGCGTTGGACTGATGATGATCTGTACGGCATCATCCGTGCGGCTAAAAAAGGCAAAAAAACCTTCATTCTGCATGATGGCCCTCCTTATGCGAATGGCAGCATTCATATTGGTCACTCGGTTAACAAGATTCTGAAAGACATTATCGTGAAGTCCAAAGGGCTTTCCGGTTATGACTCGCCGTATGTGCCTGGCTGGGACTGCCACGGTCTGCCGATCGAGCTGAAAGTCGAGCAAGAATACGGTAAGCCGGGTGAGAAATTCACCGCCGCCGAGTTCCGCGCCAAGTGCCGCGAATACGCGGCGACCCAGGTTGACGGTCAACGCAAAGACTTTATCCGTCTGGGCGTGCTGGGCGACTGGTCGCACCCGTACCTGACCATGGACTTCAAAACTGAAGCCAACATCATCCGCGCGCTGGGCAAAATCATCGGCAACGGTCACCTGCACAAAGGCGCGAAGCCAGTTCACTGGTGCGTTGACTGCCGTTCTGCGCTGGCGGAAGCGGAAGTTGAGTATTACGACAAAACTTCTCCGTCCATCGACGTTGCTTTCCAGGCAGTCGATCAGGATGCACTGAAAGCAAAATTTGCCGTAAGCAACGTTAACGGCCCAATCTCGCTGGTAATCTGGACCACCACGCCGTGGACTCTGCCTGCCAACCGCGCAATCTCTATTGCACCAGATTTCGACTATGCGCTGGTGCAGATCGACGGTCAGGCCGTGATTCTGGCGAAAGATCTGGTTGAAAGCGTAATGCAGCGTATCGGCGTGACCGATTACACCATTCTCGGCACGGTAAAAGGTGCGGAGCTTGAGCTGCTGCGCTTTACCCATCCGTTTATGGGCTTCGACGTTCCGGCAATCCTCGGCGATCACGTTACCCTGGATGCCGGTACCGGTGCCGTTCACACCGCGCCTGGCCACGGCCCGGACGACTATGTGATCGGTCAGAAATACGGCCTGGAAACCGCTAACCCGGTTGGCCCGGACGGCACTTATCTGCCGGGCACTTATCCGACGCTGGATGGCGTGAACGTCTTCAAAGCGAACGACATCGTCGTTGCGCTGCTGCAGGAAAAAGGCGCGCTGCTGCACGTTGAGAAAATGCAGCACAGCTATCCGTGCTGCTGGCGTCACAAAACGCCGATCATCTTCCGCGCGACGCCGCAGTGGTTCGTCAGCATGGATCAGAAAGGTCTGCGTGCGCAGTCACTGAAAGAGATCAAAGGCGTGCAGTGGATCCCGGACTGGGGCCAGGCGCGTATCGAGTCGATGGTTGCTAACCGTCCTGACTGGTGTATCTCCCGTCAGCGCACCTGGGGTGTACCGATGTCACTGTTCGTGCACAAAGACACGGAAGAGCTGCATCCGCGTACCCTTGAACTGATGGAAGAAGTGGCAAAACGCGTTGAAGTCGATGGCATCCAGGCGTGGTGGGATCTCGATGCGAAAGAGATCCTCGGCGACGAAGCTGATCAGTACGTGAAAGTGCCGGACACATTGGATGTATGGTTTGACTCCGGATCTACCCACTCTTCTGTTGTTGACGTGCGTCCGGAATTTGCCGGTCACGCAGCGGACATGTATCTGGAAGGTTCTGACCAACACCGCGGCTGGTTCATGTCTTCCCTAATGATCTCCACCGCGATGAAGGGTAAAGCGCCGTATCGTCAGGTACTGACCCACGGCTTTACCGTGGATGGTCAGGGCCGCAAGATGTCTAAATCCATCGGCAATACCGTTTCGCCGCAGGATGTGATGAACAAACTGGGCGCGGATATTCTGCGTCTGTGGGTGGCATCAACCGACTACACCGGTGAAATGGCCGTTTCTGACGAGATCCTGAAACGTGCTGCCGATAGCTATCGTCGTATCCGTAACACCGCGCGCTTCCTGCTGGCAAACCTGAACGGTTTTGATCCAGCAAAAGATATGGTGAAACCGGAAGAGATGGTGGTACTGGATCGCTGGGCCGTAGGTTGTGCGAAAGCGGCACAGGAAGACATCCTCAAGGCGTACGAAGCATACGATTTCCACGAAGTGGTACAGCGTCTGATGCGCTTCTGCTCCGTTGAGATGGGTTCCTTCTACCTCGACATCATCAAAGACCGTCAGTACACCGCCAAAGCGGACAGTGTGGCGCGTCGTAGCTGCCAGACTGCGCTATATCACATCGCAGAAGCGCTGGTGCGCTGGATGGCACCAATCCTCTCCTTCACCGCTGATGAAGTGTGGGGCTACCTGCCGGGCGAACGTGAAAAATACGTCTTCACCGGTGAGTGGTACGAAGGCCTGTTTGGCCTGGCAGACAGTGAAGCGATGAACGATGCGTTCTGGGACGAGCTGTTGAAAGTGCGTGGCGAAGTGAACAAAGTCATTGAGCAAGCGCGTGCCGACAAGAAAGTGGGTGGCTCGCTGGAAGCGGCAGTAACCTTGTATGCAGAACCGGAACTGTCGGCGAAACTGACCGCGCTGGGCGATGAATTACGATTTGTCCTGTTGACCTCCGGCGCTACCGTTGCAGACTATAACGACGCACCTGCTGATGCTCAGCAGAGCGAAGTACTCAAAGGGCTGAAAGTCGCGTTGAGTAAAGCCGAAGGTGAGAAGTGCCCACGCTGCTGGCACTACACCCAGGATGTCGGCAAGGTGGCGGAACACGCAGAAATCTGCGGCCGCTGTGTCAGCAACGTCGCCGGTGACGGTGAAAAACGTAAGTTTGCCTGA", 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"MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKDLVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELSAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKVAEHAEICGRCVSNVAGDGEKRKFA", - "protein_translation_length": 938, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944800" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00804" - ], - [ - "gene_synonym", - "NP_414568.1" - ], - [ - "gene_synonym", - "GI:16128021" - ], - [ - "gene_synonym", - "JW0025" - ], - [ - "gene_synonym", - "EcoGene:EG10548" - ], - [ - "gene_synonym", - "ASAP:ABE-0000096" - ], - [ - "gene_synonym", - "lspA" - ], - [ - "gene_synonym", - "ECK0028" - ], - [ - "gene_synonym", - "b0027" - ] - ], - "dna_sequence": "ATGAGTCAATCGATCTGTTCAACAGGGCTACGCTGGCTGTGGCTGGTGGTAGTCGTGCTGATTATCGATCTGGGCAGCAAATACCTGATCCTCCAGAACTTTGCTCTGGGGGATACGGTCCCGCTGTTCCCGTCGCTTAATCTGCATTATGCGCGTAACTATGGCGCGGCGTTTAGTTTCCTTGCCGATAGCGGCGGCTGGCAGCGTTGGTTCTTTGCCGGTATTGCGATTGGTATTAGCGTGATCCTGGCAGTGATGATGTATCGCTCGAAGGCCACGCAGAAGCTAAACAATATCGCTTACGCGCTGATTATTGGCGGCGCGCTGGGCAACCTGTTCGACCGCCTGTGGCACGGCTTCGTTGTCGATATGATCGACTTCTACGTCGGCGACTGGCACTTCGCCACCTTCAACCTTGCCGATACTGCCATCTGTGTCGGTGCGGCACTGATTGTGCTGGAAGGTTTTTTGCCTTCTAGAGCGAAAAAACAATAA", - "dna_sequence_length": 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"gene_synonym", - "ASAP:ABE-0000101" - ], - [ - "gene_synonym", - "yaaD" - ] - ], - "dna_sequence": "ATGTCTGAATCTGTACAGAGCAATAGCGCCGTCCTGGTGCACTTCACGCTAAAACTCGACGATGGCACCACCGCCGAGTCTACCCGCAACAACGGTAAACCGGCGCTGTTCCGCCTGGGTGATGCTTCTCTTTCTGAAGGGCTGGAGCAACACCTGTTGGGGCTGAAAGTGGGCGATAAAACCACCTTCTCGTTGGAGCCAGATGCGGCGTTTGGCGTGCCGTCACCGGACCTGATTCAGTACTTCTCCCGCCGTGAATTTATGGATGCAGGCGAGCCAGAAATTGGCGCAATCATGCTTTTTACCGCAATGGATGGCAGTGAGATGCCTGGCGTGATCCGCGAAATTAACGGCGACTCCATTACCGTTGATTTCAACCATCCGCTGGCCGGGCAGACCGTTCATTTTGATATTGAAGTGCTGGAAATCGATCCGGCACTGGAGGCGTAA", - "dna_sequence_length": 450, - "functions": [ - "FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)" - ], - "id": "CDS_27", - "location": [ - [ - "NC_000913", - 25826, - "+", - 450 - ] - ], - "md5": "b7c6b0ce7ceeaeb928da871ebf1e51bd", - "parent_gene": "", - "protein_md5": "9b645bb4da5c24a326dc2063b5c3faf4", - "protein_translation": "MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA", - "protein_translation_length": 149, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414570.1" - ], - [ - "gene_synonym", - "GeneID:944777" - ], - [ - "gene_synonym", - "ECK0030" - ], - [ - "gene_synonym", - "GI:16128023" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P62623" - ], - [ - "gene_synonym", - "lytB" - ], - [ - "gene_synonym", - "b0029" - ], - [ - "gene_synonym", - "JW0027" - ], - [ - "gene_synonym", - "ispH" - ], - [ - "gene_synonym", - "EcoGene:EG11081" - ], - [ - "gene_synonym", - "yaaE" - ], - [ - "gene_synonym", - "ASAP:ABE-0000103" - ] - ], - "dna_sequence": "ATGCAGATCCTGTTGGCCAACCCGCGTGGTTTTTGTGCCGGGGTAGACCGCGCTATCAGCATTGTTGAAAACGCGCTGGCCATTTACGGCGCACCGATATATGTCCGTCACGAAGTGGTACATAACCGCTATGTGGTCGATAGCTTGCGTGAGCGTGGGGCTATCTTTATTGAGCAGATTAGCGAAGTACCGGACGGCGCGATCCTGATTTTCTCCGCACACGGTGTTTCTCAGGCGGTACGTAACGAAGCAAAAAGTCGCGATTTGACGGTGTTTGATGCCACCTGTCCGCTGGTGACCAAAGTGCATATGGAAGTCGCCCGCGCCAGTCGCCGTGGCGAAGAATCTATTCTCATCGGTCACGCCGGGCACCCGGAAGTGGAAGGGACAATGGGCCAGTACAGTAACCCGGAAGGGGGAATGTATCTGGTCGAATCGCCGGACGATGTGTGGAAACTGACGGTCAAAAACGAAGAGAAGCTCTCCTTTATGACCCAGACCACGCTGTCGGTGGATGACACGTCTGATGTGATCGACGCGCTGCGTAAACGCTTCCCGAAAATTGTCGGTCCGCGCAAAGATGACATCTGCTACGCCACGACTAACCGTCAGGAAGCGGTACGCGCCCTGGCAGAACAGGCGGAAGTTGTGTTGGTGGTCGGTTCGAAAAACTCCTCCAACTCCAACCGTCTGGCGGAGCTGGCCCAGCGTATGGGCAAACGCGCGTTTTTGATTGACGATGCGAAAGACATCCAGGAAGAGTGGGTGAAAGAGGTTAAATGCGTCGGCGTGACTGCGGGCGCATCGGCTCCGGATATTCTGGTGCAGAATGTGGTGGCACGTTTGCAGCAGCTGGGCGGTGGTGAAGCCATTCCGCTGGAAGGCCGTGAAGAAAACATTGTTTTCGAAGTGCCGAAAGAGCTGCGTGTCGATATTCGTGAAGTCGATTAA", - "dna_sequence_length": 951, - "functions": [ - "4-hydroxy-3-methylbut-2-enyl diphosphate reductase, 4Fe-4S protein" - ], - "id": "CDS_28", - "location": [ - [ - "NC_000913", - 26277, - "+", - 951 - ] - ], - "md5": "932151d6d94a85f830805f6298377e7a", - "parent_gene": "", - "protein_md5": "fd663c367297cadbd81e4c8b4dbfb5a7", - "protein_translation": "MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD", - "protein_translation_length": 316, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0031" - ], - [ - "gene_synonym", - "NP_414571.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P22564" - ], - [ - "gene_synonym", - "GI:16128024" - ], - [ - "gene_synonym", - "ASAP:ABE-0000109" - ], - [ - "gene_synonym", - "GeneID:944796" - ], - [ - "gene_synonym", - "rihC" - ], - [ - "gene_synonym", - "EcoGene:EG11082" - ], - [ - "gene_synonym", - "b0030" - ], - [ - "gene_synonym", - "JW0028" - ], - [ - "gene_synonym", - "yaaF" - ] - ], - "dna_sequence": "ATGCGTTTACCTATCTTCCTCGATACTGACCCCGGCATTGACGATGCCGTCGCCATTGCCGCCGCGATTTTTGCACCCGAACTCGACCTGCAACTGATGACCACCGTCGCGGGTAATGTCTCGGTTGAGAAAACTACCCGCAATGCCCTGCAACTGCTGCATTTCTGGAATGCGGAGATTCCGCTCGCCCAAGGGGCCGCTGTGCCACTGGTACGCGCACCGCGTGATGCGGCATCTGTGCACGGCGAATCGGGAATGGCTGGCTACGACTTTGTTGAGCACAACCGAAAGCCGCTCGGGATACCGGCGTTTCTGGCGATTCGGGATGCCCTGATGCGTGCACCAGAGCCTGTTACCCTGGTGGCCATCGGCCCGTTAACCAATATTGCGCTGTTACTTTCACAATGCCCGGAATGCAAGCCGTATATTCGCCGTCTGGTGATCATGGGTGGTTCTGCCGGACGCGGCAACTGTACGCCAAACGCCGAGTTTAATATTGCTGCCGATCCAGAAGCTGCTGCCTGTGTCTTCCGCAGTGGTATTGAAATCGTCATGTGCGGTTTGGATGTCACCAATCAGGCAATATTAACTCCTGACTATCTCTCTACACTGCCGCAGTTAAACCGTACCGGGAAAATGCTTCACGCCCTGTTTAGCCACTACCGTAGCGGCAGTATGCAAAGCGGCTTGCGAATGCACGATCTCTGCGCCATCGCCTGGCTGGTGCGCCCGGACCTGTTCACTCTCAAACCCTGTTTTGTGGCAGTGGAAACTCAGGGCGAATTTACCTCAGGCACGACGGTGGTTGATATCGACGGTTGCCTGGGCAAGCCAGCCAATGTACAGGTGGCATTGGATCTGGATGTGAAAGGCTTCCAGCAGTGGGTGGCTGAGGTGCTGGCTCTGGCGTCGTAA", - "dna_sequence_length": 915, - "functions": [ - "ribonucleoside hydrolase 3" - ], - "id": "CDS_29", - "location": [ - [ - "NC_000913", - 27293, - "+", - 915 - ] - ], - "md5": "14059a9b26eb4980d539a84f624aeb28", - "parent_gene": "", - "protein_md5": "599f6680062a0635ee2eea6ddbb3bf13", - "protein_translation": "MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIPAFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTPNAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLSTLPQLNRTGKMLHALFSHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLGKPANVQVALDLDVKGFQQWVAEVLALAS", - "protein_translation_length": 304, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04036" - ], - [ - "gene_synonym", - "dapB" - ], - [ - "gene_synonym", - "ECK0032" - ], - [ - "gene_synonym", - "GeneID:944762" - ], - [ - "gene_synonym", - "EcoGene:EG10206" - ], - [ - "gene_synonym", - "GI:16128025" - ], - [ - "gene_synonym", - "NP_414572.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000112" - ], - [ - "gene_synonym", - "b0031" - ], - [ - "gene_synonym", - "JW0029" - ] - ], - "dna_sequence": "ATGCATGATGCAAACATCCGCGTTGCCATCGCGGGAGCCGGGGGGCGTATGGGCCGCCAGTTGATTCAGGCGGCGCTGGCATTAGAGGGCGTGCAGTTGGGCGCTGCGCTGGAGCGTGAAGGATCTTCTTTACTGGGCAGCGACGCCGGTGAGCTGGCCGGAGCCGGGAAAACAGGCGTTACCGTGCAAAGCAGCCTCGATGCGGTAAAAGATGATTTTGATGTGTTTATCGATTTTACCCGTCCGGAAGGTACGCTGAACCATCTCGCTTTTTGTCGCCAGCATGGCAAAGGGATGGTGATCGGCACTACGGGGTTTGACGAAGCCGGTAAACAAGCAATTCGTGACGCCGCTGCCGATATTGCGATTGTCTTTGCTGCCAATTTTAGCGTTGGCGTTAACGTCATGCTTAAGCTGCTGGAGAAAGCAGCCAAAGTGATGGGTGACTACACCGATATCGAAATTATTGAAGCACATCATAGACATAAAGTTGATGCGCCGTCAGGCACCGCACTGGCAATGGGAGAGGCGATCGCCCACGCCCTTGATAAAGATCTGAAAGATTGCGCGGTCTACAGTCGTGAAGGCCACACCGGTGAACGTGTGCCTGGCACCATTGGTTTTGCCACCGTGCGTGCAGGTGACATCGTTGGTGAACATACCGCGATGTTTGCCGATATTGGCGAGCGTCTGGAGATCACCCATAAGGCGTCCAGCCGTATGACATTTGCTAACGGCGCGGTAAGATCGGCTTTGTGGTTGAGTGGTAAGGAAAGCGGTCTTTTTGATATGCGAGATGTACTTGATCTCAATAATTTGTAA", - "dna_sequence_length": 822, - "functions": [ - "dihydrodipicolinate reductase" - ], - "id": "CDS_30", - "location": [ - [ - "NC_000913", - 28374, - "+", - 822 - ] - ], - "md5": "28cc3eb5f46931d95b4a02663e65e9c1", - "parent_gene": "", - "protein_md5": "f639e2efb23c6eacc2d42f822e5ad56f", - "protein_translation": "MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL", - "protein_translation_length": 273, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10134" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6F1" - ], - [ - "gene_synonym", - "ECK0033" - ], - [ - "gene_synonym", - "cap" - ], - [ - "gene_synonym", - "GI:16128026" - ], - [ - "gene_synonym", - "GeneID:949025" - ], - [ - "gene_synonym", - "ASAP:ABE-0000118" - ], - [ - "gene_synonym", - "JW0030" - ], - [ - "gene_synonym", - "arg" - ], - [ - "gene_synonym", - "b0032" - ], - [ - "gene_synonym", - "carA" - ], - [ - "gene_synonym", - "pyrA" - ], - [ - "gene_synonym", - "NP_414573.1" - ] - ], - "dna_sequence": "TTGATTAAGTCAGCGCTATTGGTTCTGGAAGACGGAACCCAGTTTCACGGTCGGGCCATAGGGGCAACAGGTTCGGCGGTTGGGGAAGTCGTTTTCAATACTTCAATGACCGGTTATCAAGAAATCCTCACTGATCCTTCCTATTCTCGTCAAATCGTTACTCTTACTTATCCCCATATTGGCAATGTCGGCACCAATGACGCCGATGAAGAATCTTCTCAGGTACATGCACAAGGTCTGGTGATTCGCGACCTGCCGCTGATTGCCAGCAACTTCCGTAATACCGAAGACCTCTCTTCTTACCTGAAACGCCATAACATCGTGGCGATTGCCGATATCGATACCCGTAAGCTGACGCGTTTACTGCGCGAGAAAGGCGCACAGAATGGCTGCATTATCGCGGGCGATAACCCGGATGCGGCGCTGGCGTTAGAAAAAGCCCGCGCGTTCCCAGGTCTGAATGGCATGGATCTGGCAAAAGAAGTGACCACCGCAGAAGCCTATAGCTGGACACAAGGGAGCTGGACGTTGACCGGTGGCCTGCCAGAAGCGAAAAAAGAAGACGAGCTGCCGTTCCACGTCGTGGCTTATGATTTTGGTGCCAAGCGCAACATCCTGCGGATGCTGGTGGATAGAGGCTGTCGCCTGACCATCGTTCCGGCGCAAACTTCTGCGGAAGATGTGCTGAAAATGAATCCAGACGGCATCTTCCTCTCCAACGGTCCTGGCGACCCGGCCCCGTGCGATTACGCCATTACCGCCATCCAGAAATTCCTCGAAACCGATATTCCGGTATTCGGCATCTGTCTCGGTCATCAGCTGCTGGCGCTGGCGAGCGGTGCGAAGACTGTCAAAATGAAATTTGGTCACCACGGCGGCAACCATCCGGTTAAAGATGTGGAGAAAAACGTGGTAATGATCACCGCCCAGAACCACGGTTTTGCGGTGGACGAAGCAACATTACCTGCAAACCTGCGTGTCACGCATAAATCCCTGTTCGACGGTACGTTACAGGGCATTCATCGCACCGATAAACCGGCATTCAGCTTCCAGGGGCACCCTGAAGCCAGCCCTGGTCCACACGACGCCGCGCCGTTGTTCGACCACTTTATCGAGTTAATTGAGCAGTACCGTAAAACCGCTAAGTAA", - "dna_sequence_length": 1149, - "functions": [ - "carbamoyl phosphate synthetase small subunit, glutamine amidotransferase" - ], - "id": "CDS_31", - "location": [ - [ - "NC_000913", - 29651, - "+", - 1149 - ] - ], - "md5": "71b58bbeec64b8c607ac2914dc52ff99", - "parent_gene": "", - "protein_md5": "4bb7e4577040102b282c076c07ca7304", - "protein_translation": "MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK", - "protein_translation_length": 382, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0034" - ], - [ - "gene_synonym", - "GeneID:944775" - ], - [ - "gene_synonym", - "EcoGene:EG10135" - ], - [ - "gene_synonym", - "GI:16128027" - ], - [ - "gene_synonym", - "cap" - ], - [ - "gene_synonym", - "NP_414574.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00968" - ], - [ - "gene_synonym", - "ASAP:ABE-0000121" - ], - [ - "gene_synonym", - "JW0031" - ], - [ - "gene_synonym", - "carB" - ], - [ - "gene_synonym", - "b0033" - ], - [ - "gene_synonym", - "pyrA" - ] - ], - "dna_sequence": "ATGCCAAAACGTACAGATATAAAAAGTATCCTGATTCTGGGTGCGGGCCCGATTGTTATCGGTCAGGCGTGTGAGTTTGACTACTCTGGCGCGCAAGCGTGTAAAGCCCTGCGTGAAGAGGGTTACCGCGTCATTCTGGTGAACTCCAACCCGGCGACCATCATGACCGACCCGGAAATGGCTGATGCAACCTACATCGAGCCGATTCACTGGGAAGTTGTACGCAAGATTATTGAAAAAGAGCGCCCGGACGCGGTGCTGCCAACGATGGGCGGTCAGACGGCGCTGAACTGCGCGCTGGAGCTGGAACGTCAGGGCGTGTTGGAAGAGTTCGGTGTCACCATGATTGGTGCCACTGCCGATGCGATTGATAAAGCAGAAGACCGCCGTCGTTTCGACGTAGCGATGAAGAAAATTGGTCTGGAAACCGCGCGTTCCGGTATCGCACACACGATGGAAGAAGCGCTGGCGGTTGCCGCTGACGTGGGCTTCCCGTGCATTATTCGCCCATCCTTTACCATGGGCGGTAGCGGCGGCGGTATCGCTTATAACCGTGAAGAGTTTGAAGAAATTTGCGCCCGCGGTCTGGATCTCTCTCCGACCAAAGAGTTGCTGATTGATGAGTCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTGCGTGATAAAAACGACAACTGCATCATCGTCTGCTCTATCGAAAACTTCGATGCGATGGGCATCCACACCGGTGACTCCATCACTGTCGCGCCAGCCCAAACGCTGACCGACAAAGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAACGGTCGTCTGATTGTTATCGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGTACTCCGGCCTCCTTCGAGCCGTCCATCGACTATGTGGTTACTAAAATTCCTCGCTTCAACTTCGAAAAATTCGCCGGTGCTAACGACCGTCTGACCACTCAGATGAAATCGGTTGGCGAAGTGATGGCGATTGGTCGCACGCAGCAGGAATCCCTGCAAAAAGCGCTGCGCGGCCTGGAAGTCGGTGCGACTGGATTCGACCCGAAAGTGAGCCTGGATGACCCGGAAGCGTTAACCAAAATCCGTCGCGAACTGAAAGACGCAGGCGCAGATCGTATCTGGTACATCGCCGATGCGTTCCGTGCGGGCCTGTCTGTGGACGGCGTCTTCAACCTGACCAACATTGACCGCTGGTTCCTGGTACAGATTGAAGAGCTGGTGCGTCTGGAAGAGAAAGTGGCGGAAGTGGGCATCACTGGCCTGAACGCTGACTTCCTGCGCCAGCTGAAACGCAAAGGCTTTGCCGATGCGCGCTTGGCAAAACTGGCGGGCGTACGCGAAGCGGAAATCCGTAAGCTGCGTGACCAGTATGACCTGCACCCGGTTTATAAGCGCGTGGATACCTGTGCGGCAGAGTTCGCCACCGACACCGCTTACATGTACTCCACTTATGAAGAAGAGTGCGAAGCGAATCCGTCTACCGACCGTGAAAAAATCATGGTGCTTGGCGGCGGCCCGAACCGTATCGGTCAGGGTATCGAATTCGACTACTGTTGCGTACACGCCTCGCTGGCGCTGCGCGAAGACGGTTACGAAACCATTATGGTTAACTGTAACCCGGAAACCGTCTCCACCGACTACGACACTTCCGACCGCCTCTACTTCGAGCCGGTAACTCTGGAAGATGTGCTGGAAATCGTGCGTATCGAGAAGCCGAAAGGCGTTATCGTCCAGTACGGCGGTCAGACCCCGCTGAAACTGGCGCGCGCGCTGGAAGCTGCTGGCGTACCGGTTATCGGCACCAGCCCGGATGCTATCGACCGTGCAGAAGACCGTGAACGCTTCCAGCATGCGGTTGAGCGTCTGAAACTGAAACAACCGGCGAACGCCACCGTTACCGCTATTGAAATGGCGGTAGAGAAGGCGAAAGAGATTGGCTACCCGCTGGTGGTACGTCCGTCTTACGTTCTCGGCGGTCGGGCGATGGAAATCGTCTATGACGAAGCTGACCTGCGTCGCTACTTCCAGACGGCGGTCAGCGTGTCTAACGATGCGCCAGTGTTGCTGGACCACTTCCTCGATGACGCGGTAGAAGTTGACGTGGATGCCATCTGCGACGGCGAAATGGTGCTGATTGGCGGCATCATGGAGCATATTGAGCAGGCGGGCGTGCACTCCGGTGACTCCGCATGTTCTCTGCCAGCCTACACCTTAAGTCAGGAAATTCAGGATGTGATGCGCCAGCAGGTGCAGAAACTGGCCTTCGAATTGCAGGTGCGCGGCCTGATGAACGTGCAGTTTGCGGTGAAAAACAACGAAGTCTACCTGATTGAAGTTAACCCGCGTGCGGCGCGTACCGTTCCGTTCGTCTCCAAAGCCACCGGCGTACCGCTGGCAAAAGTGGCGGCGCGCGTGATGGCTGGCAAATCGCTGGCTGAGCAGGGCGTAACCAAAGAAGTTATCCCGCCGTACTACTCGGTGAAAGAAGTGGTGCTGCCGTTCAATAAATTCCCGGGCGTTGACCCGCTGTTAGGGCCAGAAATGCGCTCTACCGGGGAAGTCATGGGCGTGGGCCGCACCTTCGCTGAAGCGTTTGCCAAAGCGCAGCTGGGCAGCAACTCCACCATGAAGAAACACGGTCGTGCGCTGCTTTCCGTGCGCGAAGGCGATAAAGAACGCGTGGTGGACCTGGCGGCAAAACTGCTGAAACAGGGCTTCGAGCTGGATGCGACCCACGGCACGGCGATTGTGCTGGGCGAAGCAGGTATCAACCCGCGTCTGGTAAACAAGGTGCATGAAGGCCGTCCGCACATTCAGGACCGTATCAAGAATGGCGAATATACCTACATCATCAACACCACCTCAGGCCGTCGTGCGATTGAAGACTCCCGCGTGATTCGTCGCAGTGCGCTGCAATATAAAGTGCATTACGACACCACCCTGAACGGCGGCTTTGCCACCGCGATGGCGCTGAATGCCGATGCGACTGAAAAAGTAATTTCGGTGCAGGAAATGCACGCACAGATCAAATAA", - "dna_sequence_length": 3222, - "functions": [ - "carbamoyl-phosphate synthase large subunit" - ], - "id": "CDS_32", - "location": [ - [ - "NC_000913", - 30817, - "+", - 3222 - ] - ], - "md5": "155e489300d697103c837e36bb6d2481", - "parent_gene": "", - "protein_md5": "ed1aec2733811466d12b0a050407a275", - "protein_translation": "MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK", - "protein_translation_length": 1073, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0035" - ], - [ - "gene_synonym", - "GI:90111079" - ], - [ - "gene_synonym", - "EcoGene:EG13451" - ], - [ - "gene_synonym", - "GeneID:944795" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE58" - ], - [ - "gene_synonym", - "caiF" - ], - [ - "gene_synonym", - "ASAP:ABE-0000125" - ], - [ - "gene_synonym", - "JW0033" - ], - [ - "gene_synonym", - "NP_414576.4" - ], - [ - "gene_synonym", - "b0034" - ] - ], - "dna_sequence": "ATGTGTGAAGGATATGTTGAAAAACCACTCTACTTGTTAATCGCCGAATGGATGATGGCTGAAAATCGGTGGGTGATAGCAAGAGAGATCTCTATTCATTTCGATATTGAACACAGCAAGGCGGTTAATACCCTGACTTATATTCTGTCGGAAGTCACAGAAATAAGCTGCGAAGTTAAGATGATCCCTAATAAGCTGGAAGGGCGGGGATGCCAGTGTCAGCGACTGGTTAAAGTGGTCGATATCGATGAGCAAATTTACGCGCGCCTGCGCAATAACAGTCGGGAAAAATTAGTCGGTGTAAGAAAGACGCCGCGTATTCCTGCCGTTCCGCTCACGGAACTTAACCGCGAGCAGAAGTGGCAGATGATGTTGTCAAAGAGTATGCGTCGTTAA", - "dna_sequence_length": 396, - "functions": [ - "cai operon transcriptional activator" - ], - "id": "CDS_33", - "location": [ - [ - "NC_000913", - 34300, - "+", - 396 - ] - ], - "md5": "f13223163c7d85237656defaa37a4ba7", - "parent_gene": "", - "protein_md5": "61d804f5e6839c42806f4d4e18fd3c6d", - "protein_translation": "MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR", - "protein_translation_length": 131, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948999" - ], - [ - "gene_synonym", - "ECK0036" - ], - [ - "gene_synonym", - "GI:90111080" - ], - [ - "gene_synonym", - "JW5004" - ], - [ - "gene_synonym", - "caiE" - ], - [ - "gene_synonym", - "NP_414577.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0000128" - ], - [ - "gene_synonym", - "EcoGene:EG12608" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39206" - ], - [ - "gene_synonym", - "b0035" - ] - ], - "dna_sequence": "GTGAGCTATTACGCCTTTGAGGGGTTAATTCCGGTGGTTCACCCGACGGCGTTTGTCCATCCCAGTGCCGTCTTGATTGGCGATGTGATTGTGGGAGCCGGTGTCTACATCGGCCCACTCGCCTCACTGCGTGGTGACTACGGGCGGTTGATCGTGCAAGCGGGAGCCAATATTCAGGATGGCTGCATTATGCATGGCTACTGCGACACTGACACTATCGTTGGGGAAAACGGCCATATCGGGCACGGAGCGATCCTGCATGGTTGTTTGATTGGTCGCGATGCATTGGTCGGGATGAACAGCGTGATTATGGATGGCGCGGTCATTGGCGAAGAGAGCATTGTTGCCGCCATGAGCTTTGTCAAAGCGGGCTTTCGCGGCGAGAAACGCCAGTTGTTGATGGGTACGCCAGCCCGCGCTGTACGCAATGTTAGTGACGACGAGTTACACTGGAAACGGTTGAATACCAAAGAGTATCAGGATCTTGTCGGGCGCTGTCATGTATCGTTACATGAAACGCAGCCACTGAGGCAAATGGAGGAAAATCGCCCCCGTTTGCAGGGGACGACGGATGTGACGCCTAAACGGTGA", - "dna_sequence_length": 591, - "functions": [ - "stimulator of CaiD and CaiB enzyme activities" - ], - "id": "CDS_34", - "location": [ - [ - "NC_000913", - 35371, - "-", - 591 - ] - ], - "md5": "e8437dd8a9320af122b7690a5f102577", - "parent_gene": "", - "protein_md5": "ae7caab41013348183df893ed0613591", - "protein_translation": "MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCLIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDLVGRCHVSLHETQPLRQMEENRPRLQGTTDVTPKR", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:221800779" - ], - [ - "gene_synonym", - "ECK0037" - ], - [ - "gene_synonym", - "NP_414578.2" - ], - [ - "gene_synonym", - "EcoGene:EG11557" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31551" - ], - [ - "gene_synonym", - "JW0035" - ], - [ - "gene_synonym", - "ASAP:ABE-0000130" - ], - [ - "gene_synonym", - "yaaL" - ], - [ - "gene_synonym", - "caiD" - ], - [ - "gene_synonym", - "GeneID:948995" - ], - [ - "gene_synonym", - "b0036" - ] - ], - "dna_sequence": "ATGAGTGAATCATTACATCTGACCCGCAATGGATCAATTCTGGAAATTACCCTTGATCGTCCAAAAGCGAATGCTATTGATGCAAAAACCAGCTTTGAAATGGGCGAAGTATTTCTAAATTTCCGTGACGATCCGCAATTACGTGTCGCCATTATTACCGGTGCCGGAGAGAAGTTCTTTTCCGCGGGCTGGGATTTAAAAGCGGCAGCAGAAGGCGAAGCACCGGATGCTGACTTTGGTCCGGGTGGTTTTGCGGGATTAACCGAAATTTTCAATCTCGACAAACCGGTTATCGCAGCTGTGAACGGCTATGCCTTTGGCGGCGGCTTTGAACTGGCGCTGGCGGCAGATTTTATTGTTTGTGCCGATAACGCCAGCTTCGCCCTGCCGGAAGCCAAACTGGGCATCGTTCCTGACAGCGGCGGTGTGCTGCGTCTGCCGAAGATCCTGCCGCCTGCCATCGTCAATGAAATGGTGATGACCGGCAGACGAATGGGCGCAGAAGAGGCGCTGCGTTGGGGGATAGTCAACCGCGTGGTTAGCCAGGCGGAACTGATGGATAACGCCCGCGAACTGGCTCAGCAGCTGGTTAACAGCGCCCCGCTGGCGATTGCGGCGCTGAAAGAGATCTACCGCACCACCAGCGAAATGCCGGTAGAAGAAGCGTATCGCTATATTCGCAGCGGCGTGTTGAAACACTATCCATCGGTTCTGCATTCGGAAGATGCCATTGAAGGGCCGCTGGCGTTTGCCGAGAAGCGCGATCCGGTGTGGAAAGGACGTTAA", - "dna_sequence_length": 786, - "functions": [ - "carnitinyl-CoA dehydratase" - ], - "id": "CDS_35", - "location": [ - [ - "NC_000913", - 36162, - "-", - 786 - ] - ], - "md5": "6ef2e64a3eb6c05f537c6cb72ae4f783", - "parent_gene": "", - "protein_md5": "d9c8f73871e078c879e4ff865e64a61d", - "protein_translation": "MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR", - "protein_translation_length": 261, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414579.4" - ], - [ - "gene_synonym", - "GI:221800780" - ], - [ - "gene_synonym", - "ECK0038" - ], - [ - "gene_synonym", - "EcoGene:EG11558" - ], - [ - "gene_synonym", - "JW0036" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31552" - ], - [ - "gene_synonym", - "yaaM" - ], - [ - "gene_synonym", - "ASAP:ABE-0000133" - ], - [ - "gene_synonym", - "caiC" - ], - [ - "gene_synonym", - "b0037" - ], - [ - "gene_synonym", - "GeneID:944886" - ] - ], - "dna_sequence": "ATGGATATCATTGGCGGACAACATCTACGTCAAATGTGGGACGATCTTGCGGACGTTTACGGTCATAAAACGGCGCTGATTTGTGAATCCAGCGGCGGAGTCGTTAACCGGTATAGTTATCTTGAGTTAAATCAGGAGATTAACCGCACGGCAAACCTGTTTTATACGCTGGGGATTCGCAAAGGCGACAAGGTTGCACTACATCTCGACAACTGCCCGGAATTTATCTTTTGCTGGTTCGGGCTGGCAAAAATTGGCGCGATTATGGTGCCGATTAACGCCCGCCTGTTGTGCGAGGAAAGCGCGTGGATCCTGCAAAATAGCCAGGCGTGCCTGCTGGTGACCAGTGCGCAATTCTATCCTATGTATCAACAGATTCAGCAGGAAGATGCCACTCAATTGCGGCACATTTGCCTGACAGATGTGGCACTTCCCGCTGATGATGGCGTGAGTTCGTTTACTCAACTGAAAAATCAACAACCTGCCACCTTGTGCTATGCACCGCCGCTATCGACTGACGATACGGCGGAAATTCTCTTCACCTCCGGCACCACCTCCCGACCGAAAGGTGTGGTGATTACCCATTACAACCTGCGCTTCGCTGGATATTACTCCGCCTGGCAGTGTGCACTGCGTGACGATGACGTCTACCTGACGGTAATGCCTGCGTTTCATATCGATTGCCAGTGTACTGCGGCGATGGCGGCGTTTTCTGCCGGGGCCACCTTTGTGCTGGTCGAGAAATACAGCGCCCGCGCCTTCTGGGGACAGGTACAGAAGTACCGCGCCACCGTTACCGAATGTATTCCGATGATGATCCGTACGTTGATGGTACAGCCGCCTTCAGCGAACGATCAGCAACACCGCCTGCGGGAAGTGATGTTTTATCTCAACTTGTCGGAGCAGGAAAAAGATGCGTTTTGTGAACGCTTCGGCGTTCGCTTGCTGACGTCTTATGGGATGACGGAAACCATTGTGGGCATTATCGGCGATCGTCCTGGCGATAAACGACGCTGGCCGTCGATTGGTCGGGTGGGGTTTTGCTACGAAGCGGAGATCCGCGACGATCACAATCGCCCGCTCCCGGCTGGTGAGATCGGTGAAATCTGCATTAAAGGCATACCTGGGAAAACCATCTTCAAAGAGTACTTTCTCAACCCACAAGCCACTGCGAAAGTGCTGGAAGCCGATGGCTGGCTGCATACCGGCGATACCGGATACCGCGACGAAGAGGACTTTTTTTATTTCGTCGATCGCCGCTGCAATATGATTAAACGTGGCGGCGAGAATGTCTCCTGCGTGGAGCTGGAAAATATTATCGCCGCGCACCCGAAAATTCAGGACATCGTGGTTGTGGGTATTAAAGATTCGATTCGCGATGAAGCCATCAAAGCATTTGTGGTGCTGAATGAAGGTGAAACATTGAGCGAAGAGGAATTTTTCCGCTTCTGCGAACAAAATATGGCGAAATTTAAAGTGCCCTCTTATCTGGAGATCAGAAAAGATCTGCCACGTAATTGCTCGGGGAAAATAATTAGAAAGAATCTGAAATAA", - "dna_sequence_length": 1554, - "functions": [ - "putative crotonobetaine/carnitine-CoA ligase" - ], - "id": "CDS_36", - "location": [ - [ - "NC_000913", - 37824, - "-", - 1554 - ] - ], - "md5": "e0828c6bd385b202dc42cd8f8d438c9a", - "parent_gene": "", - "protein_md5": "a9e5fb09e2ded7f9efee0fdabc5425ed", - "protein_translation": "MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLCEESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDQQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRVGFCYEAEIRDDHNRPLPAGEIGEICIKGIPGKTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEDFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK", - "protein_translation_length": 517, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414580.1" - ], - [ - "gene_synonym", - "EcoGene:EG11559" - ], - [ - "gene_synonym", - "GI:16128032" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31572" - ], - [ - "gene_synonym", - "ECK0039" - ], - [ - "gene_synonym", - "ASAP:ABE-0000136" - ], - [ - "gene_synonym", - "JW0037" - ], - [ - "gene_synonym", - "b0038" - ], - [ - "gene_synonym", - "caiB" - ], - [ - "gene_synonym", - "yaaN" - ], - [ - "gene_synonym", - "GeneID:948997" - ] - ], - "dna_sequence": "ATGGATCATCTACCCATGCCGAAATTCGGGCCGTTGGCCGGATTGCGCGTTGTCTTCTCCGGTATCGAAATCGCCGGACCGTTTGCCGGGCAAATGTTCGCAGAATGGGGCGCGGAAGTTATCTGGATCGAGAACGTCGCCTGGGCCGACACCATTCGCGTTCAACCGAACTACCCGCAACTCTCCCGCCGCAATTTGCACGCGCTGTCGTTAAATATTTTCAAAGATGAAGGCCGCGAAGCGTTTCTGAAATTAATGGAAACCACCGATATCTTCATCGAAGCCAGTAAAGGTCCGGCCTTTGCCCGTCGTGGCATTACCGATGAAGTACTGTGGCAGCACAACCCGAAACTGGTTATCGCTCACCTGTCCGGTTTTGGTCAGTACGGCACCGAGGAGTACACCAATCTTCCGGCCTATAACACTATCGCCCAGGCCTTTAGTGGTTACCTGATTCAGAACGGTGATGTTGACCAGCCAATGCCTGCCTTCCCGTATACCGCCGATTACTTTTCTGGCCTGACCGCCACCACGGCGGCGCTGGCAGCACTGCATAAAGTGCGTGAAACCGGTAAAGGCGAAAGTATCGACATCGCCATGTATGAAGTGATGCTGCGTATGGGCCAGTACTTCATGATGGATTACTTCAACGGCGGCGAAATGTGCCCGCGCATGAGCAAAGGTAAAGATCCCTACTACGCCGGTTGCGGTCTGTATAAATGTGCCGACGGCTACATCGTGATGGAACTGGTGGGCATTACCCAAATTGAAGAGTGCTTTAAAGATATTGGCCTCGCACATCTGCTTGGCACGCCAGAAATCCCGGAAGGCACTCAGCTTATCCACCGTATCGAATGCCCTTACGGCCCACTGGTTGAAGAGAAACTCGATGCCTGGCTGGCGACACATACCATCGCGGAAGTAAAAGAACGCTTTGCTGAACTGAATATCGCCTGCGCCAAAGTGCTGACCGTACCGGAACTGGAAAGCAATCCACAGTATGTGGCTCGCGAATCAATCACTCAGTGGCAAACGATGGATGGTCGCACCTGCAAAGGGCCGAACATCATGCCGAAATTCAAAAATAACCCCGGACAAATCTGGCGCGGAATGCCCTCACATGGCATGGACACGGCTGCCATTTTGAAAAATATCGGCTACAGCGAAAACGACATTCAGGAGTTGGTCAGCAAAGGTCTGGCCAAAGTTGAGGACTAA", - "dna_sequence_length": 1218, - "functions": [ - "crotonobetainyl CoA:carnitine CoA transferase" - ], - "id": "CDS_37", - "location": [ - [ - "NC_000913", - 39115, - "-", - 1218 - ] - ], - "md5": "654fd95eb47e1ad688ea155db76d1663", - "parent_gene": "", - "protein_md5": "f5f726e4fa4f96657eb9f84c388113b4", - "protein_translation": "MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED", - "protein_translation_length": 405, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "caiA" - ], - [ - "gene_synonym", - "EcoGene:EG11560" - ], - [ - "gene_synonym", - "GI:16128033" - ], - [ - "gene_synonym", - "b0039" - ], - [ - "gene_synonym", - "ECK0040" - ], - [ - "gene_synonym", - "GeneID:949064" - ], - [ - "gene_synonym", - "yaaO" - ], - [ - "gene_synonym", - "NP_414581.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60584" - ], - [ - "gene_synonym", - "ASAP:ABE-0000139" - ], - [ - "gene_synonym", - "JW0038" - ] - ], - "dna_sequence": "ATGGATTTTAATTTAAATGATGAGCAGGAACTGTTTGTCGCCGGTATCCGCGAACTGATGGCCAGCGAAAACTGGGAGGCCTATTTTGCCGAGTGCGACCGTGACAGCGTCTACCCGGAACGTTTTGTCAAAGCACTGGCGGATATGGGTATCGACAGTCTGCTGATCCCTGAAGAGCACGGTGGTCTGGACGCGGGGTTTGTTACTCTCGCCGCCGTGTGGATGGAGCTGGGACGTCTGGGGGCACCAACCTATGTGCTGTACCAGTTGCCGGGCGGGTTCAACACCTTCCTGCGCGAAGGCACACAAGAGCAGATCGACAAAATTATGGCTTTCCGCGGCACCGGTAAGCAGATGTGGAACTCAGCGATTACCGAACCGGGCGCGGGCTCCGACGTGGGTAGCCTGAAAACGACTTATACCCGTAGAAATGGTAAGATTTATCTTAATGGTAGTAAGTGTTTTATTACCAGCAGCGCCTACACCCCGTACATCGTGGTGATGGCGCGCGACGGGGCTTCTCCGGACAAACCTGTCTACACCGAATGGTTTGTTGATATGAGCAAACCGGGCATCAAAGTGACCAAACTTGAAAAGCTCGGTCTGCGTATGGATAGCTGCTGTGAAATCACCTTTGACGACGTGGAACTGGACGAGAAAGACATGTTCGGTCGGGAAGGTAACGGCTTTAACCGCGTCAAAGAAGAGTTCGACCATGAACGTTTCCTGGTAGCCCTCACCAACTACGGTACGGCGATGTGCGCCTTTGAAGATGCGGCGCGCTACGCCAATCAGCGCGTGCAGTTTGGCGAGGCTATTGGTCGTTTCCAGTTGATTCAGGAAAAATTCGCCCACATGGCGATCAAATTAAACTCCATGAAAAACATGCTGTATGAAGCAGCGTGGAAAGCAGACAACGGCACCATCACCTCTGGCGATGCAGCGATGTGCAAATACTTCTGCGCCAATGCGGCATTTGAAGTTGTGGATAGCGCAATGCAGGTGCTGGGCGGTGTCGGGATTGCGGGCAACCACCGCATCAGCCGCTTCTGGCGTGATCTGCGTGTAGACCGCGTCTCCGGGGGATCTGACGAAATGCAGATCCTGACGCTGGGTCGTGCGGTGCTGAAGCAATACCGCTAA", - "dna_sequence_length": 1143, - "functions": [ - "crotonobetaine reductase subunit II, FAD-binding" - ], - "id": "CDS_38", - "location": [ - [ - "NC_000913", - 40386, - "-", - 1143 - ] - ], - "md5": "ee41013f471c492ddbba6d8ef902e6cd", - "parent_gene": "", - "protein_md5": "fa68e48e0f4f5f7e3a1b394e6ac0e47f", - "protein_translation": "MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR", - "protein_translation_length": 380, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944765" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31553" - ], - [ - "gene_synonym", - "NP_414582.1" - ], - [ - "gene_synonym", - "yaaP" - ], - [ - "gene_synonym", - "GI:16128034" - ], - [ - "gene_synonym", - "ASAP:ABE-0000141" - ], - [ - "gene_synonym", - "b0040" - ], - [ - "gene_synonym", - "ECK0041" - ], - [ - "gene_synonym", - "caiT" - ], - [ - "gene_synonym", - "EcoGene:EG11561" - ], - [ - "gene_synonym", - "JW0039" - ] - ], - "dna_sequence": "ATGAAGAATGAAAAGAGAAAAACGGGAATAGAACCGAAGGTTTTCTTTCCGCCGTTAATAATCGTCGGCATACTTTGTTGGCTTACAGTCAGAGATCTGGATGCAGCGAATGTCGTTATTAATGCTGTATTCAGTTACGTCACCAATGTATGGGGATGGGCATTTGAATGGTATATGGTGGTGATGCTTTTCGGTTGGTTCTGGCTGGTGTTTGGCCCGTATGCCAAAAAGCGTTTAGGTAACGAACCGCCAGAATTTAGCACCGCCAGTTGGATCTTTATGATGTTCGCCTCCTGTACGTCTGCTGCCGTACTGTTCTGGGGATCGATTGAGATCTACTACTACATCTCCACCCCGCCGTTTGGCTTAGAACCGAACTCGACAGGGGCGAAAGAGTTGGGGCTGGCTTACAGCTTGTTCCACTGGGGACCTCTGCCGTGGGCCACTTACAGCTTCCTTTCAGTCGCCTTCGCTTACTTCTTCTTTGTCCGCAAAATGGAAGTGATTCGCCCCAGCTCGACACTGGTGCCGCTGGTAGGTGAAAAACACGCCAAAGGGTTGTTCGGCACTATCGTCGACAACTTCTATCTCGTCGCCTTGATCTTCGCGATGGGTACCAGTCTGGGCCTTGCCACGCCGCTGGTGACCGAGTGTATGCAATGGTTGTTTGGCATTCCGCATACCCTGCAACTGGACGCTATCATCATTACCTGCTGGATTATCCTCAACGCCATTTGCGTCGCTTGCGGTCTGCAAAAAGGGGTACGTATCGCCAGTGACGTGCGTAGTTACCTGAGCTTCCTGATGCTGGGTTGGGTGTTCATTGTCAGCGGTGCCAGCTTCATCATGAACTACTTCACCGATTCGGTGGGGATGTTGCTGATGTATCTGCCGCGCATGTTGTTCTATACCGATCCCATCGCTAAAGGCGGCTTCCCGCAGGGCTGGACCGTGTTCTACTGGGCATGGTGGGTGATTTATGCTATCCAGATGAGTATCTTCCTCGCCCGCATCTCCCGTGGTCGTACTGTGCGTGAACTGTGCTTCGGCATGGTGCTGGGGCTGACAGCGTCAACCTGGATCCTGTGGACTGTACTCGGTAGTAACACTCTGCTGTTGATAGATAAAAACATCATCAACATTCCAAATCTGATCGAACAGTACGGTGTGGCGCGCGCCATCATTGAAACCTGGGCCGCTCTGCCACTCAGCACCGCCACCATGTGGGGCTTCTTCATCCTCTGCTTTATTGCCACCGTTACGCTGGTTAACGCCTGCTCTTATACCCTGGCGATGTCCACTTGCCGCGAAGTACGCGATGGTGAAGAACCACCTCTGCTGGTGCGTATCGGTTGGTCAATTCTGGTTGGCATTATCGGTATTGTTCTGCTGGCGCTCGGCGGCCTGAAACCGATTCAAACCGCCATTATCGCCGGAGGATGCCCGCTGTTCTTCGTCAACATTATGGTGACGCTCTCCTTTATTAAAGACGCGAAACAGAACTGGAAAGATTAA", - "dna_sequence_length": 1515, - "functions": [ - "putative transporter" - ], - "id": "CDS_39", - "location": [ - [ - "NC_000913", - 41931, - "-", - 1515 - ] - ], - "md5": "e2b00c513f67475c6d8f0a711a61d3f9", - "parent_gene": "", - "protein_md5": "38b4db6538bce110ff050407026631c8", - "protein_translation": "MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLIDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD", - "protein_translation_length": 504, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0040" - ], - [ - "gene_synonym", - "NP_414583.2" - ], - [ - "gene_synonym", - "GI:90111081" - ], - [ - "gene_synonym", - "yaaQ" - ], - [ - "gene_synonym", - "EcoGene:EG11562" - ], - [ - "gene_synonym", - "b0041" - ], - [ - "gene_synonym", - "ASAP:ABE-0000145" - ], - [ - "gene_synonym", - "ECK0042" - ], - [ - "gene_synonym", - "GeneID:947316" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60566" - ], - [ - "gene_synonym", - "fixA" - ] - ], - "dna_sequence": "ATGAAGATTATTACTTGCTATAAGTGCGTGCCTGATGAACAGGATATTGCGGTCAATAATGCTGATGGTTCATTAGACTTCAGCAAAGCCGATGCCAAAATAAGCCAATACGATCTCAACGCTATTGAAGCGGCTTGCCAGCTAAAGCAACAGGCAGCAGAGGCGCAGGTGACAGCCTTAAGTGTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAGCAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCCAGCAGGTTGGTCTGCTGGTGGGCGAAATCCTCAATATTCCGGCAGTTAACGGCGTCAGCAAAATTATCTCCCTGACGGCAGATACCCTCACCGTTGAGCGCGAACTGGAAGATGAAACCGAAACCTTAAGCATTCCGCTGCCTGCGGTTGTTGCTGTTTCCACTGATATCAACTCCCCACAAATTCCTTCGATGAAAGCCATTCTCGGCGCGGCGAAAAAGCCCGTCCAGGTATGGTCGGCGGCGGATATTGGTTTTAACGCAGAGGCAGCCTGGTCAGAACAACAGGTTGCCGCGCCGAAACAGCGCGAACGTCAGCGCATCGTGATTGAAGGCGACGGCGAAGAACAGATCGCCGCATTTGCTGAAAATCTTCGCAAAGTCATTTAA", - "dna_sequence_length": 771, - "functions": [ - "anaerobic carnitine reduction putative electron transfer flavoprotein subunit" - ], - "id": "CDS_40", - "location": [ - [ - "NC_000913", - 42403, - "+", - 771 - ] - ], - "md5": "c8e0a9ad48baa1234585e6c2c57a4013", - "parent_gene": "", - "protein_md5": "519318b39f87a1b89045902a8e149408", - "protein_translation": "MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI", - "protein_translation_length": 256, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0041" - ], - [ - "gene_synonym", - "EcoGene:EG11563" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31574" - ], - [ - "gene_synonym", - "yaaR" - ], - [ - "gene_synonym", - "GeneID:948939" - ], - [ - "gene_synonym", - "GI:16128036" - ], - [ - "gene_synonym", - "b0042" - ], - [ - "gene_synonym", - "NP_414584.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000147" - ], - [ - "gene_synonym", - "ECK0043" - ], - [ - "gene_synonym", - "fixB" - ] - ], - "dna_sequence": "ATGAACACGTTTTCTCAAGTCTGGGTATTCAGCGATACCCCTTCTCGTCTGCCGGAACTGATGAACGGTGCGCAGGCTTTAGCTAATCAAATCAACACCTTTGTCCTCAATGATGCCGACGGCGCACAGGCAATCCAGCTCGGCGCTAATCATGTCTGGAAATTAAACGGCAAACCGGACGATCGGATGATCGAAGATTACGCCGGTGTCATGGCTGACACTATTCGCCAGCACGGCGCAGACGGCCTGGTGCTGCTGCCAAACACCCGTCGCGGCAAATTACTGGCGGCAAAACTGGGTTATCGCCTTAAAGCGGCGGTGTCTAACGATGCCAGCACCGTCAGCGTACAGGACGGTAAAGCGACAGTGAAACACATGGTTTACGGTGGTCTGGCGATTGGCGAAGAACGCATTGCCACGCCGTATGCGGTACTGACCATCAGCAGCGGCACGTTCGATGCGGCTCAGCCAGACGCGTCACGCACTGGCGAAACGCACACCGTGGAGTGGCAGGCTCCGGCTGTGGCGATTACCCGCACGGCAACCCAGGCGCGCCAGAGCAACAGCGTCGATCTCGACAAAGCCCGTCTGGTGGTCAGCGTCGGTCGCGGTATTGGCAGCAAAGAGAACATTGCGCTGGCAGAACAGCTTTGCAAGGCGATAGGTGCGGAGTTGGCCTGTTCTCGTCCGGTGGCGGAAAACGAAAAATGGATGGAGCACGAACGCTATGTCGGTATCTCCAACCTGATGCTGAAACCTGAACTGTACCTGGCGGTGGGGATCTCCGGGCAGATCCAGCACATGGTTGGCGCTAACGCGTCGCAAACCATTTTCGCCATCAATAAAGATAAAAATGCGCCGATCTTCCAGTACGCGGATTACGGCATTGTTGGCGACGCCGTGAAGATCCTTCCGGCGCTGACCGCAGCTTTAGCGCGTTGA", - "dna_sequence_length": 942, - "functions": [ - "putative electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like protein" - ], - "id": "CDS_41", - "location": [ - [ - "NC_000913", - 43188, - "+", - 942 - ] - ], - "md5": "3cf7be4aebdd7ea4d74b5b6a94b60a86", - "parent_gene": "", - "protein_md5": "a6a7192af9aac1d6a8179ccd34c0e88f", - "protein_translation": "MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGAQAIQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR", - "protein_translation_length": 313, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0044" - ], - [ - "gene_synonym", - "JW0042" - ], - [ - "gene_synonym", - "NP_414585.1" - ], - [ - "gene_synonym", - "yaaS" - ], - [ - "gene_synonym", - "EcoGene:EG11564" - ], - [ - "gene_synonym", - "GI:16128037" - ], - [ - "gene_synonym", - "b0043" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68644" - ], - [ - "gene_synonym", - "ASAP:ABE-0000149" - ], - [ - "gene_synonym", - "fixC" - ], - [ - "gene_synonym", - "GeneID:948958" - ] - ], - "dna_sequence": "ATGTCCGAAGATATCTTTGACGCCATCATCGTCGGTGCAGGGCTTGCCGGTTCGGTTGCCGCACTGGTGCTCGCCCGCGAAGGTGCGCAAGTGTTAGTTATCGAGCGTGGCAATTCCGCAGGTGCCAAGAACGTCACCGGCGGGCGTCTCTATGCCCACAGTCTGGAACACATTATTCCTGGTTTCGCCGACTCCGCCCCCGTAGAACGCCTGATCACCCATGAAAAACTCGCGTTTATGACGGAAAAGTCAGCGATGACTATGGACTACTGCAATGGTGACGAAACCTCGCCATCCCAGCGTTCTTACTCCGTTTTGCGCAGTAAATTTGATGCCTGGCTGATGGAGCAGGCCGAAGAAGCGGGCGCGCAGTTAATTACCGGGATCCGCGTCGATAACCTCGTACAGCGCGATGGCAAAGTCGTCGGTGTAGAAGCCGATGGCGATGTGATTGAAGCGAAAACGGTGATCCTTGCTGATGGGGTGAACTCCATCCTTGCCGAAAAATTGGGGATGGCAAAACGCGTCAAACCGACGGATGTGGCGGTTGGCGTGAAGGAACTGATCGAGTTACCGAAGTCGGTTATTGAAGACCGTTTTCAGTTGCAGGGTAATCAGGGGGCGGCTTGCCTGTTTGCGGGATCACCCACCGATGGCCTGATGGGCGGCGGCTTCCTTTATACCAATGAAAACACCCTGTCGCTGGGGCTGGTTTGTGGTTTGCATCATCTGCATGACGCGAAAAAATCGGTGCCGCAAATGCTGGAAGATTTCAAACAGCATCCGGCCGTTGCACCGCTGATCGCGGGCGGCAAGCTGGTGGAATATTCCGCTCACGTAGTGCCGGAAGCAGGCATCAACATGCTGCCGGAGTTGGTTGGTGACGGCGTATTGATTGCCGGTGATGCCGCCGGAATGTGTATGAACCTCGGTTTTACCATTCGCGGTATGGATCTGGCGATTGCCGCCGGGGAAGCCGCAGCAAAAACCGTGCTTTCAGCGATGAAAAGCGACGATTTCAGTAAGCAAAAACTGGCGGAATATCGTCAGCATCTTGAGAGTGGTCCGCTGCGCGATATGCGTATGTACCAGAAACTACCGGCGTTCCTTGATAACCCACGCATGTTTAGCGGCTACCCGGAGCTGGCGGTGGGTGTGGCGCGTGACCTGTTCACCATTGATGGCAGCGCGCCGGAACTGATGCGCAAGAAAATCCTCCGCCACGGCAAGAAAGTGGGCTTCATCAATCTAATCAAGGATGGCATGAAAGGAGTGACCGTTTTATGA", - "dna_sequence_length": 1287, - "functions": [ - "putative oxidoreductase" - ], - "id": "CDS_42", - "location": [ - [ - "NC_000913", - 44180, - "+", - 1287 - ] - ], - "md5": "945833d424ca91037c246a3d80b1ccba", - "parent_gene": "", - "protein_md5": "a87c39e41931e84f94d7b94331865e2a", - "protein_translation": "MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL", - "protein_translation_length": 428, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0043" - ], - [ - "gene_synonym", - "GI:16128038" - ], - [ - "gene_synonym", - "NP_414586.1" - ], - [ - "gene_synonym", - "GeneID:948590" - ], - [ - "gene_synonym", - "fixX" - ], - [ - "gene_synonym", - "yaaT" - ], - [ - "gene_synonym", - "ASAP:ABE-0000151" - ], - [ - "gene_synonym", - "ECK0045" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68646" - ], - [ - "gene_synonym", - "b0044" - ], - [ - "gene_synonym", - "EcoGene:EG11565" - ] - ], - "dna_sequence": "ATGACTTCTCCCGTCAATGTGGACGTCAAACTGGGCGTCAATAAATTCAATGTCGATGAAGAGCATCCGCACATTGTTGTGAAGGCCGATGCTGATAAACAGGCGCTGGAGCTGCTGGTGAAAGCGTGCCCCGCAGGTCTGTACAAGAAGCAGGATGACGGCAGTGTGCGCTTCGATTACGCCGGATGTCTGGAGTGCGGCACCTGTCGCATTCTGGGGCTGGGGTCGGCGCTGGAACAGTGGGAATACCCGCGCGGCACCTTTGGTGTGGAGTTCCGTTACGGCTGA", - "dna_sequence_length": 288, - "functions": [ - "putative 4Fe-4S ferredoxin-type protein" - ], - "id": "CDS_43", - "location": [ - [ - "NC_000913", - 45463, - "+", - 288 - ] - ], - "md5": "fb893d4a48aae049a6b9501763fab666", - "parent_gene": "", - "protein_md5": "25c176104b8a298c5e47bbc96315ab21", - "protein_translation": "MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG", - "protein_translation_length": 95, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128039" - ], - [ - "gene_synonym", - "GeneID:944766" - ], - [ - "gene_synonym", - "JW0044" - ], - [ - "gene_synonym", - "ASAP:ABE-0000156" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31679" - ], - [ - "gene_synonym", - "yaaU" - ], - [ - "gene_synonym", - "EcoGene:EG11566" - ], - [ - "gene_synonym", - "ECK0046" - ], - [ - "gene_synonym", - "yabE" - ], - [ - "gene_synonym", - "b0045" - ], - [ - "gene_synonym", - "NP_414587.1" - ] - ], - "dna_sequence": "ATGCAACCGTCCAGAAACTTTGACGATCTCAAATTCTCCTCTATTCACCGCCGCATTTTGCTGTGGGGAAGCGGTGGTCCGTTTCTGGATGGTTATGTACTGGTAATGATTGGCGTGGCGCTGGAGCAACTGACGCCGGCGCTGAAACTGGACGCTGACTGGATTGGCTTGCTGGGCGCGGGAACGCTCGCCGGGCTGTTCGTTGGCACATCGCTGTTTGGTTATATTTCCGATAAAGTCGGACGGCGCAAAATGTTCCTCATTGATATCATCGCCATCGGCGTGATATCGGTGGCGACGATGTTTGTTTCATCCCCCGTCGAACTGTTGGTGATGCGGGTACTTATCGGCATTGTCATCGGTGCAGATTATCCCATCGCCACCTCAATGATCACCGAGTTCTCCAGTACCCGTCAGCGGGCGTTTTCCATCAGCTTTATTGCCGCGATGTGGTATGTCGGCGCGACCTGTGCCGATCTGGTCGGCTACTGGCTTTATGATGTGGAAGGCGGCTGGCGCTGGATGCTGGGTAGCGCGGCGATCCCCTGTTTGTTGATTTTGATTGGTCGATTCGAACTGCCTGAATCTCCCCGCTGGTTATTACGCAAAGGGCGAGTAAAAGAGTGCGAAGAGATGATGATCAAACTGTTTGGCGAACCGGTGGCTTTCGATGAAGAGCAGCCGCAGCAAACCCGTTTTCGCGATCTGTTTAATCGCCGCCATTTTCCTTTTGTTCTGTTTGTTGCCGCCATCTGGACCTGCCAGGTGATCCCAATGTTCGCCATTTACACCTTTGGCCCGCAAATCGTTGGTTTGTTGGGATTGGGGGTTGGCAAAAACGCGGCACTAGGGAATGTGGTGATTAGCCTGTTCTTTATGCTCGGCTGTATTCCGCCGATGCTGTGGTTAAACACTGCCGGACGGCGTCCATTGTTGATTGGCAGCTTTGCCATGATGACGCTGGCGCTGGCGGTTTTGGGGCTAATCCCGGATATGGGGATCTGGCTGGTAGTGATGGCCTTTGCGGTGTATGCCTTTTTCTCTGGCGGGCCGGGTAATTTGCAGTGGCTCTATCCTAATGAACTCTTCCCGACAGATATCCGCGCCTCTGCCGTGGGCGTGATTATGTCCTTAAGTCGTATTGGCACCATTGTTTCGACCTGGGCACTACCGATCTTTATCAATAATTACGGTATCAGTAACACGATGCTAATGGGGGCGGGTATCTCGCTGTTTGGCTTGTTGATTTCCGTAGCGTTTGCCCCGGAGACTCGAGGGATGTCACTGGCGCAGACCAGCAATATGACGATCCGCGGGCAGAGAATGGGGTAA", - "dna_sequence_length": 1332, - "functions": [ - "putative MFS sugar transporter", - "membrane protein" - ], - "id": "CDS_44", - "location": [ - [ - "NC_000913", - 45807, - "+", - 1332 - ] - ], - "md5": "14cff3df61bcc0a159cbd738e7203031", - "parent_gene": "", - "protein_md5": "b7dfd486a24cdf66bca7ff9b4c27866d", - "protein_translation": "MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG", - "protein_translation_length": 443, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11568" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A754" - ], - [ - "gene_synonym", - "JW0045" - ], - [ - "gene_synonym", - "ASAP:ABE-0000159" - ], - [ - "gene_synonym", - "NP_414588.1" - ], - [ - "gene_synonym", - "GeneID:944767" - ], - [ - "gene_synonym", - "ECK0047" - ], - [ - "gene_synonym", - "b0046" - ], - [ - "gene_synonym", - "yabF" - ], - [ - "gene_synonym", - "GI:16128040" - ], - [ - "gene_synonym", - "kefF" - ] - ], - "dna_sequence": "ATGATTCTTATAATTTATGCGCATCCGTATCCGCATCATTCCCATGCGAATAAACGGATGCTTGAACAGGCAAGGACGCTGGAAGGCGTCGAAATTCGCTCTCTTTATCAACTCTATCCTGACTTCAATATCGATATTGCCGCCGAGCAGGAGGCGCTGTCTCGCGCCGATCTGATCGTCTGGCAGCATCCGATGCAGTGGTACAGCATTCCTCCGCTCCTCAAACTTTGGATCGATAAAGTTTTCTCCCACGGCTGGGCTTACGGTCATGGCGGCACGGCGCTGCATGGCAAACATTTGCTGTGGGCGGTGACGACCGGCGGCGGGGAAAGCCATTTTGAAATTGGTGCGCATCCGGGCTTTGATGTGCTGTCGCAGCCGCTACAGGCGACGGCAATCTACTGCGGGCTGAACTGGCTGCCACCGTTTGCCATGCACTGCACCTTTATTTGTGACGACGAAACCCTCGAAGGGCAGGCGCGTCACTATAAGCAACGTCTGCTGGAATGGCAGGAGGCCCATCATGGATAG", - "dna_sequence_length": 531, - "functions": [ - "potassium-efflux system ancillary protein for KefC, glutathione-regulated", - "quinone oxidoreductase, FMN-dependent" - ], - "id": "CDS_45", - "location": [ - [ - "NC_000913", - 47246, - "+", - 531 - ] - ], - "md5": "d701061637135de3d8c43b53c115f0aa", - "parent_gene": "", - "protein_md5": "61913914683c9ecef01d172aaaa9153e", - "protein_translation": "MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEWQEAHHG", - "protein_translation_length": 176, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "trkC" - ], - [ - "gene_synonym", - "JW0046" - ], - [ - "gene_synonym", - "ASAP:ABE-0000161" - ], - [ - "gene_synonym", - "NP_414589.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03819" - ], - [ - "gene_synonym", - "b0047" - ], - [ - "gene_synonym", - "GI:16128041" - ], - [ - "gene_synonym", - "kefC" - ], - [ - "gene_synonym", - "ECK0048" - ], - [ - "gene_synonym", - "EcoGene:EG10521" - ], - [ - "gene_synonym", - "GeneID:944773" - ] - ], - "dna_sequence": "ATGGATAGCCATACGCTGATTCAGGCGCTGATTTATCTCGGTTCGGCAGCGCTGATTGTACCCATTGCGGTACGTCTTGGTCTGGGATCGGTACTTGGCTACCTGATCGCCGGCTGCATTATTGGCCCGTGGGGGCTGCGACTGGTGACCGATGCCGAATCTATTCTGCACTTTGCCGAGATTGGGGTGGTGCTGATGCTGTTTATTATCGGCCTCGAACTCGATCCACAAAGGCTGTGGAAGCTGCGTGCGGCAGTGTTCGGCTGTGGCGCATTGCAGATGGTGATTTGCGGCGGCCTGCTGGGGCTGTTCTGCATGTTACTTGGGCTGCGCTGGCAGGTCGCGGAATTGATCGGCATGACGCTGGCGCTCTCCTCTACGGCGATTGCCATGCAGGCGATGAATGAACGCAATCTGATGGTGACGCAAATGGGTCGCAGTGCCTTTGCGGTGCTGCTGTTCCAGGATATCGCGGCGATCCCGCTGGTGGCGATGATTCCGCTACTGGCAACGAGCAGTGCCTCGACGACGATGGGCGCATTTGCTCTCTCGGCGTTAAAAGTGGCGGGTGCGCTGGTGCTGGTGGTATTGCTGGGGCGCTATGTCACGCGTCCGGCGCTGCGTTTTGTAGCCCGCTCTGGCTTGCGGGAAGTGTTTAGTGCCGTGGCGTTATTCCTCGTGTTTGGCTTTGGTTTGCTGCTGGAAGAGGTCGGCTTGTCGATGGCGATGGGCGCGTTTCTGGCGGGCGTACTGCTGGCAAGCTCGGAATACCGTCATGCGCTGGAGAGCGATATCGAACCATTTAAAGGTTTGCTGTTGGGGCTGTTTTTCATCGGTGTTGGCATGTCGATAGACTTTGGCACGCTGCTTGAAAACCCATTGCGCATTGTCATTTTGCTGCTCGGTTTCCTCATCATCAAAATCGCCATGCTGTGGCTGATTGCCCGACCGTTGCAAGTGCCAAATAAACAGCGTCGTTGGTTTGCGGTGTTGTTAGGGCAGGGCAGTGAGTTTGCCTTTGTGGTATTTGGCGCGGCGCAGATGGCGAATGTGCTGGAGCCGGAGTGGGCGAAATCGCTGACCCTGGCGGTGGCGCTGTCGATGGCAGCAACGCCGATTCTGCTGGTGATCCTCAATCGCCTTGAGCAATCTTCTACTGAGGAAGCGCGTGAAGCCGATGAGATCGACGAAGAACAGCCGCGCGTGATTATCGCCGGATTCGGTCGTTTTGGGCAGATTACCGGACGTTTACTGCTCTCCAGCGGGGTGAAAATGGTGGTACTCGATCACGATCCGGACCATATCGAAACCTTGCGTAAATTTGGTATGAAAGTGTTTTATGGCGATGCCACGCGGATGGATTTACTGGAATCTGCCGGAGCGGCGAAAGCGGAAGTGCTGATTAACGCCATCGACGATCCGCAAACCAACCTGCAACTGACAGAGATGGTGAAAGAACATTTCCCGCATTTGCAGATTATTGCCCGCGCCCGCGATGTCGACCACTACATTCGTTTGCGTCAGGCAGGCGTTGAAAAGCCGGAGCGTGAAACCTTCGAAGGTGCGCTGAAAACCGGGCGTCTGGCACTGGAAAGTTTAGGTCTGGGGCCGTATGAAGCGCGAGAACGTGCCGATGTGTTCCGCCGCTTTAATATTCAGATGGTGGAAGAGATGGCAATGGTTGAGAACGACACCAAAGCCCGCGCGGCGGTCTATAAACGCACCAGCGCGATGTTAAGTGAGATCATTACCGAGGACCGCGAACATCTGTCATTAATTCAACGACATGGCTGGCAGGGAACCGAAGAAGGTAAACATACCGGCAACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAA", 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- "aliases": [ - [ - "gene_synonym", - "GI:16128042" - ], - [ - "gene_synonym", - "JW0047" - ], - [ - "gene_synonym", - "tmrA" - ], - [ - "gene_synonym", - "GeneID:944790" - ], - [ - "gene_synonym", - "EcoGene:EG10326" - ], - [ - "gene_synonym", - "ASAP:ABE-0000164" - ], - [ - "gene_synonym", - "folA" - ], - [ - "gene_synonym", - "NP_414590.1" - ], - [ - "gene_synonym", - "b0048" - ], - [ - "gene_synonym", - "ECK0049" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABQ4" - ] - ], - "dna_sequence": "ATGATCAGTCTGATTGCGGCGTTAGCGGTAGATCGCGTTATCGGCATGGAAAACGCCATGCCGTGGAACCTGCCTGCCGATCTCGCCTGGTTTAAACGCAACACCTTAAATAAACCCGTGATTATGGGCCGCCATACCTGGGAATCAATCGGTCGTCCGTTGCCAGGACGCAAAAATATTATCCTCAGCAGTCAACCGGGTACGGACGATCGCGTAACGTGGGTGAAGTCGGTGGATGAAGCCATCGCGGCGTGTGGTGACGTACCAGAAATCATGGTGATTGGCGGCGGTCGCGTTTATGAACAGTTCTTGCCAAAAGCGCAAAAACTGTATCTGACGCATATCGACGCAGAAGTGGAAGGCGACACCCATTTCCCGGATTACGAGCCGGATGACTGGGAATCGGTATTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAA", - 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"GI:16128043" - ] - ], - "dna_sequence": "ATGGCGACATACCTTATTGGCGACGTTCATGGTTGTTACGATGAACTGATCGCATTGCTGCATAAAGTAGAATTTACCCCTGGGAAAGATACCCTCTGGCTGACGGGCGATCTGGTCGCGCGCGGGCCGGGTTCGCTGGATGTTCTGCGCTATGTGAAATCCTTAGGCGACAGCGTACGTCTGGTGCTGGGCAATCACGATCTGCATCTGCTGGCGGTATTTGCCGGGATCAGCCGCAATAAACCGAAAGATCGCCTGACACCGCTGCTGGAAGCGCCGGATGCCGACGAGCTGCTTAACTGGCTGCGGCGCCAGCCTCTGCTGCAAATCGACGAAGAGAAAAAGCTGGTGATGGCCCACGCAGGGATCACGCCGCAGTGGGATCTGCAGACCGCCAAAGAGTGCGCACGCGATGTAGAAGCGGTGCTATCGAGTGACTCCTATCCCTTCTTTCTTGATGCCATGTACGGCGATATGCCAAATAACTGGTCACCGGAATTGCGGGGGCTGGGAAGACTGCGTTTTATCACCAACGCTTTTACCCGTATGCGTTTTTGCTTCCCGAACGGTCAACTGGATATGTACAGCAAAGAATCGCCGGAAGAGGCCCCTGCCCCACTGAAACCGTGGTTTGCGATTCCTGGCCCTGTCGCTGAAGAATACAGCATCGCCTTTGGTCACTGGGCATCGCTGGAGGGCAAAGGTACGCCGGAAGGTATATACGCGCTGGATACCGGCTGCTGCTGGGGTGGTACATTAACCTGCCTGCGCTGGGAAGATAAACAGTATTTTGTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAA", - "dna_sequence_length": 843, - "functions": [ - "diadenosine tetraphosphatase" - ], - "id": "CDS_48", - "location": [ - [ - "NC_000913", - 51222, - "-", - 843 - ] - ], - "md5": "3539ea06aa18a15a838bc1aceb47d0c7", - "parent_gene": "", - "protein_md5": "0fc0ae6392796ac6c2286821ebe1190b", - "protein_translation": "MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVAEEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDLGEAAAS", - "protein_translation_length": 280, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "corD" - ], - [ - "gene_synonym", - "ASAP:ABE-0000169" - ], - [ - "gene_synonym", - "EcoGene:EG10047" - ], - [ - "gene_synonym", - "GeneID:944772" - ], - [ - "gene_synonym", - "temP" - ], - [ - "gene_synonym", - "NP_414592.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P62672" - ], - [ - "gene_synonym", - "JW0049" - ], - [ - "gene_synonym", - "apaG" - ], - [ - "gene_synonym", - "ECK0051" - ], - [ - "gene_synonym", - "b0050" - ], - [ - "gene_synonym", - "GI:16128044" - ] - ], - "dna_sequence": "ATGATCAATTCGCCCCGAGTGTGTATTCAGGTTCAAAGCGTCTACATTGAGGCTCAATCTTCACCTGATAATGAACGTTACGTTTTTGCTTATACCGTAACCATACGCAATCTGGGGCGAGCGCCAGTGCAGTTGTTGGGGCGTTACTGGCTGATCACCAATGGCAATGGCCGTGAAACCGAAGTCCAGGGCGAAGGAGTGGTTGGCGTCCAGCCACTTATCGCGCCTGGCGAAGAGTACCAGTACACCAGCGGTGCAATCATTGAAACCCCGCTGGGCACCATGCAGGGTCACTACGAAATGATCGATGAAAATGGCGTCCCTTTCAGCATCGACATTCCCGTATTCCGACTCGCCGTTCCCACACTCATTCATTAA", - "dna_sequence_length": 378, - "functions": [ - "protein associated with Co2+ and Mg2+ efflux" - ], - "id": "CDS_49", - "location": [ - [ - "NC_000913", - 51606, - "-", - 378 - ] - ], - "md5": "52ba273dd7d5ee02411bf9bd1cedd732", - "parent_gene": "", - "protein_md5": "10af8e029d2976e91ee59bcb09e86b15", - "protein_translation": "MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH", - "protein_translation_length": 125, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rsmA" - ], - [ - "gene_synonym", - "JW0050" - ], - [ - "gene_synonym", - "EcoGene:EG10523" - ], - [ - "gene_synonym", - "GeneID:944939" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06992" - ], - [ - "gene_synonym", - "ASAP:ABE-0000175" - ], - [ - "gene_synonym", - "NP_414593.1" - ], - [ - "gene_synonym", - "ksgA" - ], - [ - "gene_synonym", - "GI:16128045" - ], - [ - "gene_synonym", - "b0051" - ], - [ - "gene_synonym", - "ECK0052" - ] - ], - "dna_sequence": "ATGAATAATCGAGTCCACCAGGGCCACTTAGCCCGTAAACGCTTCGGGCAAAACTTTCTCAACGATCAGTTCGTGATCGACAGTATTGTGTCTGCCATTAACCCGCAAAAGGGCCAGGCGATGGTCGAAATCGGCCCCGGTCTGGCGGCATTGACCGAACCGGTCGGCGAACGTCTGGACCAGCTGACGGTCATCGAACTTGACCGCGATCTGGCGGCACGTCTGCAAACGCATCCATTCTTAGGCCCGAAACTGACGATTTATCAGCAGGATGCGATGACCTTTAACTTTGGTGAACTGGCCGAGAAAATGGGTCAGCCGCTGCGTGTTTTCGGCAACCTGCCTTATAACATCTCCACGCCGTTGATGTTCCATCTGTTTAGCTATACTGATGCCATTGCCGACATGCACTTTATGTTGCAAAAAGAGGTGGTGAATCGTCTGGTTGCAGGACCGAACAGCAAAGCGTATGGTCGATTAAGCGTCATGGCGCAATACTATTGCAATGTGATCCCGGTACTGGAAGTACCGCCGTCAGCCTTTACACCACCACCCAAAGTGGATTCCGCCGTCGTGCGCCTGGTTCCTCATGCAACGATGCCTCACCCGGTTAAAGATGTTCGTGTGTTGAGCCGCATCACCACCGAAGCCTTTAACCAGCGTCGTAAAACCATTCGTAACAGCCTCGGCAACCTGTTTAGCGTCGAGGTGTTAACGGGAATGGGGATCGACCCGGCGATGCGAGCGGAAAATATCTCTGTCGCGCAATATTGCCAGATGGCGAACTATCTGGCGGAGAACGCGCCTTTGCAGGAGAGTTAA", - "dna_sequence_length": 822, - "functions": [ - "16S rRNA m(6)A1518, m(6)A1519 dimethyltransferase, SAM-dependent" - ], - "id": "CDS_50", - "location": [ - [ - "NC_000913", - 52430, - "-", - 822 - ] - ], - "md5": "cbae11c74e237e2c1ce7147e0d206d92", - "parent_gene": "", - "protein_md5": "2515d982c79f8d998293c1777b6b4314", - "protein_translation": "MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES", - "protein_translation_length": 273, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000178" - ], - [ - "gene_synonym", - "GeneID:944919" - ], - [ - "gene_synonym", - "JW0051" - ], - [ - "gene_synonym", - "NP_414594.1" - ], - [ - "gene_synonym", - "EcoGene:EG10691" - ], - [ - "gene_synonym", - "pdxA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P19624" - ], - [ - "gene_synonym", - "ECK0053" - ], - [ - "gene_synonym", - "b0052" - ], - [ - "gene_synonym", - "GI:16128046" - ] - ], - "dna_sequence": "ATGGTTAAAACCCAACGTGTTGTGATCACTCCCGGCGAGCCCGCCGGGATTGGCCCGGACTTAGTTGTCCAGCTTGCACAGCGTGAGTGGCCGGTCGAACTGGTTGTTTGTGCCGATGCCACTCTCCTTACCAACCGGGCAGCGATGCTCGGTTTGCCGCTCACCCTCCGCCCTTATTCCCCCAACTCCCCTGCACAACCGCAAACTGCGGGCACATTAACGCTACTTCCTGTCGCGCTACGTGCACCTGTCACTGCGGGGCAGTTAGCGGTTGAAAATGGGCATTATGTGGTGGAAACGCTGGCGCGAGCGTGCGATGGTTGTCTGAACGGCGAATTTGCCGCGCTGATCACAGGTCCGGTGCATAAAGGCGTTATTAACGACGCTGGCATTCCTTTTACCGGTCATACCGAGTTTTTCGAAGAGCGTTCGCAGGCGAAAAAGGTGGTGATGATGCTGGCGACCGAAGAACTTCGCGTGGCGCTGGCAACGACGCATTTACCGCTGCGCGATATCGCAGACGCTATCACCCCTGCACTTTTGCACGAAGTGATTGCTATTTTGCATCACGATTTGCGGACCAAATTTGGTATTGCCGAACCGCGCATTCTGGTCTGCGGGCTGAATCCGCACGCGGGCGAAGGCGGTCATATGGGTACGGAAGAGATAGACACCATTATTCCGGTGCTCAATGAGCTGCGGGCGCAGGGGATGAAACTCAACGGGCCGCTGCCTGCCGATACCCTGTTTCAGCCGAAATATCTTGATAACGCCGACGCCGTGCTGGCGATGTACCACGATCAGGGTCTTCCCGTGCTAAAATACCAGGGCTTCGGGCGCGGTGTGAACATTACGCTGGGCCTGCCCTTTATTCGCACATCAGTGGACCACGGCACCGCGCTTGAACTGGCGGGACGTGGCAAAGCCGATGTCGGCAGTTTTATTACGGCGCTTAATCTCGCCATCAAAATGATTGTTAACACCCAATGA", - "dna_sequence_length": 990, - "functions": [ - "4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent" - ], - "id": "CDS_51", - "location": [ - [ - "NC_000913", - 53416, - "-", - 990 - ] - ], - "md5": "92858dd38303c95a870b5738f34ab764", - "parent_gene": "", - "protein_md5": "1cfadfa6ee50881af75c0c606a5c991a", - "protein_translation": "MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRAPVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ", - "protein_translation_length": 329, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414595.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000180" - ], - [ - "gene_synonym", - "JW0052" - ], - [ - "gene_synonym", - "surA" - ], - [ - "gene_synonym", - "GeneID:944812" - ], - [ - "gene_synonym", - "ECK0054" - ], - [ - "gene_synonym", - "EcoGene:EG10985" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABZ6" - ], - [ - "gene_synonym", - "GI:16128047" - ], - [ - "gene_synonym", - "b0053" - ] - ], - "dna_sequence": "ATGAAGAACTGGAAAACGCTGCTTCTCGGTATCGCCATGATCGCGAATACCAGTTTCGCTGCCCCCCAGGTAGTCGATAAAGTCGCAGCCGTCGTCAATAACGGCGTCGTGCTGGAAAGCGACGTTGATGGATTAATGCAGTCGGTAAAACTGAACGCTGCTCAGGCAAGGCAGCAACTTCCTGATGACGCGACGCTGCGCCACCAAATCATGGAACGTTTGATCATGGATCAAATCATCCTGCAGATGGGGCAGAAAATGGGAGTGAAAATCTCCGATGAGCAGCTGGATCAGGCGATTGCTAACATCGCGAAACAGAACAACATGACGCTGGATCAGATGCGCAGCCGTCTGGCTTACGATGGACTGAACTACAACACCTATCGTAACCAGATCCGCAAAGAGATGATTATCTCTGAAGTGCGTAACAACGAGGTGCGTCGTCGCATCACCATCCTGCCGCAGGAAGTCGAATCCCTGGCGCAGCAGGTGGGTAACCAAAACGACGCCAGCACTGAGCTGAACCTGAGCCACATCCTGATCCCGCTGCCGGAAAACCCGACCTCTGATCAGGTGAACGAAGCGGAAAGCCAGGCGCGCGCCATTGTCGATCAGGCGCGTAACGGCGCTGATTTCGGTAAGCTGGCGATTGCTCATTCTGCCGACCAGCAGGCGCTGAACGGCGGCCAGATGGGCTGGGGCCGTATTCAGGAGTTGCCCGGGATCTTCGCCCAGGCATTAAGCACCGCGAAGAAAGGCGACATTGTTGGCCCGATTCGTTCCGGCGTTGGCTTCCATATTCTGAAAGTTAACGACCTGCGCGGCGAAAGCAAAAATATCTCGGTGACCGAAGTTCATGCTCGCCATATTCTGCTGAAACCGTCGCCGATCATGACTGACGAACAGGCCCGTGTGAAACTGGAACAGATTGCTGCTGATATCAAGAGTGGTAAAACGACTTTTGCTGCCGCAGCGAAAGAGTTCTCTCAGGATCCAGGCTCTGCTAACCAGGGCGGCGATCTCGGCTGGGCTACACCAGATATTTTCGATCCGGCCTTCCGTGACGCCCTGACTCGCCTGAACAAAGGTCAAATGAGTGCACCGGTTCACTCTTCATTCGGCTGGCATTTAATCGAACTGCTGGATACCCGTAATGTCGATAAAACCGACGCTGCGCAGAAAGATCGTGCATACCGCATGCTGATGAACCGTAAGTTCTCGGAAGAAGCAGCAAGCTGGATGCAGGAACAACGTGCCAGCGCCTACGTTAAAATCCTGAGCAACTAA", 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"UniProtKB/Swiss-Prot:P31554" - ], - [ - "gene_synonym", - "GeneID:945011" - ], - [ - "gene_synonym", - "ostA" - ], - [ - "gene_synonym", - "b0054" - ], - [ - "gene_synonym", - "ECK0055" - ], - [ - "gene_synonym", - "NP_414596.1" - ], - [ - "gene_synonym", - "imp" - ], - [ - "gene_synonym", - "yabG" - ], - [ - "gene_synonym", - "lptD" - ], - [ - "gene_synonym", - "GI:16128048" - ] - ], - "dna_sequence": "ATGAAAAAACGTATCCCCACTCTCCTGGCCACCATGATTGCCACCGCCCTTTATAGTCAACAGGGACTGGCAGCCGACCTCGCCTCACAGTGCATGTTGGGCGTGCCAAGCTATGACCGTCCTCTGGTACAGGGCGATACCAATGACTTACCCGTGACTATCAATGCTGACCACGCGAAAGGGGACTACCCGGATGACGCCGTGTTTACTGGCAGCGTGGATATCATGCAGGGTAACAGCCGTCTGCAGGCCGACGAAGTGCAGCTCCATCAAAAAGAGGCACCAGGACAACCGGAGCCGGTACGTACCGTTGATGCGCTCGGTAATGTCCATTACGACGATAACCAGGTGATCCTCAAAGGGCCGAAAGGCTGGGCGAATCTGAACACCAAAGATACCAACGTCTGGGAAGGTGATTACCAGATGGTGGGTCGCCAGGGTCGCGGTAAAGCGGACCTGATGAAACAACGTGGCGAAAACCGCTATACCATTCTGGATAACGGTAGCTTTACCTCCTGTCTGCCGGGTTCTGACACCTGGAGCGTGGTAGGTAGCGAAATTATTCATGACCGCGAAGAACAAGTTGCGGAGATCTGGAACGCCCGCTTTAAGGTGGGTCCGGTACCGATCTTTTATAGCCCCTATTTGCAGTTGCCGGTGGGTGACAAACGTCGCTCTGGTTTCTTGATCCCGAACGCCAAGTACACCACCACCAACTACTTTGAGTTCTACCTGCCATATTACTGGAACATCGCGCCAAATATGGATGCCACCATCACGCCGCATTATATGCATCGTCGTGGCAACATCATGTGGGAGAACGAATTCCGCTACCTCTCCCAGGCGGGCGCTGGCTTGATGGAACTGGACTATCTGCCTTCAGATAAAGTCTATGAAGATGAACACCCGAACGATGACAGTTCACGTCGTTGGTTATTCTACTGGAACCACTCCGGGGTCATGGATCAGGTGTGGCGTTTCAACGTCGACTACACCAAGGTCAGCGATCCTAGCTACTTCAATGATTTCGATAACAAGTACGGTTCCAGTACTGACGGCTACGCAACGCAAAAATTCAGCGTTGGCTATGCGGTGCAAAACTTCAATGCCACCGTTTCAACCAAGCAGTTCCAGGTTTTCAGCGAACAGAACACCAGTAGCTACTCGGCAGAGCCGCAGTTAGACGTTAATTACTACCAGAATGATGTTGGTCCGTTTGATACGCGTATTTACGGCCAGGCAGTGCACTTTGTTAACACCAGAGACGACATGCCTGAAGCAACCCGTGTTCACCTGGAACCGACCATCAATTTGCCGCTCTCTAATAACTGGGGCAGCATCAATACCGAAGCGAAGTTGCTGGCAACCCATTATCAGCAAACCAATCTTGACTGGTATAACTCCAGAAACACGACCAAGCTGGACGAATCCGTTAACCGCGTAATGCCGCAATTCAAAGTTGACGGCAAAATGGTCTTTGAACGCGATATGGAAATGCTGGCTCCGGGTTATACCCAAACGCTGGAACCGCGCGCGCAGTATTTGTACGTGCCGTATCGCGATCAGAGCGACATCTATAACTACGACTCGTCTCTGCTGCAATCTGACTACTCTGGCCTGTTCCGGGACCGGACTTACGGCGGTCTTGACCGTATTGCCTCCGCTAACCAGGTGACGACCGGTGTCACATCTCGCATATATGATGATGCTGCCGTTGAACGTTTTAATATTTCCGTTGGTCAAATCTACTATTTCACGGAGTCTCGCACTGGCGATGACAACATAACATGGGAGAATGACGACAAAACGGGTTCACTGGTGTGGGCAGGCGATACTTACTGGCGTATCTCCGAGCGTTGGGGATTGCGTGGCGGGATTCAGTACGATACACGTCTGGATAACGTAGCGACCAGTAACTCCAGCATTGAATACCGTCGGGATGAAGACCGTCTGGTACAGCTGAATTACCGTTACGCCAGCCCGGAATATATTCAGGCTACGCTGCCTAAGTACTATTCCACTGCTGAGCAATATAAGAATGGTATTTCGCAGGTAGGTGCTGTCGCCAGCTGGCCAATTGCCGATCGTTGGTCCATTGTTGGGGCCTACTACTACGACACCAATGCTAACAAGCAAGCCGACTCTATGTTAGGTGTGCAATACAGCTCCTGCTGCTATGCAATTCGCGTCGGTTACGAGCGGAAGCTGAACGGTTGGGATAACGATAAACAACATGCGGTATATGACAACGCAATCGGCTTTAACATCGAACTTCGCGGCCTGAGCTCCAACTACGGTCTGGGTACGCAAGAGATGCTGCGTTCGAACATTCTGCCGTATCAAAACACTTTGTGA", 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"MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQGDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWNHSGVMDQVWRFNVDYTKVSDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEPQLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTEAKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTLEPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRIYDDAAVERFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRGGIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGISQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWDNDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL", - "protein_translation_length": 784, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0054" - ], - [ - "gene_synonym", - "ASAP:ABE-0000187" - ], - [ - "gene_synonym", - "NP_414597.1" - ], - [ - "gene_synonym", - "EcoGene:EG11570" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31680" - ], - [ - "gene_synonym", - "GI:16128049" - ], - [ - "gene_synonym", - "ECK0056" - ], - [ - "gene_synonym", - "GeneID:948992" - ], - [ - "gene_synonym", - "yabH" - ], - [ - "gene_synonym", - "b0055" - ], - [ - "gene_synonym", - "djlA" - ] - ], - "dna_sequence": "ATGCAGTATTGGGGAAAAATCATTGGCGTGGCCGTGGCCTTACTGATGGGCGGCGGCTTTTGGGGCGTAGTGTTAGGCCTGTTAATTGGCCATATGTTTGATAAAGCCCGTAGCCGTAAAATGGCGTGGTTCGCCAACCAGCGTGAGCGTCAGGCGCTGTTTTTTGCCACCACTTTTGAAGTGATGGGGCATTTAACCAAATCCAAAGGTCGCGTCACGGAGGCTGATATTCATATCGCCAGCCAGTTGATGGACCGAATGAATCTTCATGGCGCTTCCCGTACTGCGGCGCAAAATGCGTTCCGGGTGGGAAAATCAGACAATTACCCGCTGCGCGAAAAGATGCGCCAGTTTCGCAGTGTCTGCTTTGGTCGTTTTGACTTAATTCGTATGTTTCTGGAGATCCAGATTCAGGCGGCGTTTGCTGATGGTTCACTGCACCCGAATGAACGGGCGGTGCTGTATGTCATTGCAGAAGAATTAGGGATCTCCCGCGCTCAGTTTGACCAGTTTTTGCGCATGATGCAGGGCGGTGCACAGTTTGGCGGCGGTTATCAGCAGCAAACTGGCGGTGGTAACTGGCAGCAAGCGCAGCGTGGCCCAACGCTGGAAGATGCCTGTAATGTGCTGGGCGTGAAGCCGACGGATGATGCGACCACCATCAAACGTGCCTACCGTAAGCTGATGAGTGAACACCATCCCGATAAGCTGGTGGCGAAAGGTTTGCCGCCTGAGATGATGGAGATGGCGAAGCAGAAAGCGCAGGAAATTCAGCAGGCATATGAGCTGATAAAGCAGCAGAAAGGGTTTAAATGA", - "dna_sequence_length": 816, - "functions": [ - "membrane-anchored DnaK co-chaperone, DNA-binding protein" - ], - "id": "CDS_54", - "location": [ - [ - "NC_000913", - 57364, - "+", - 816 - ] - ], - "md5": "04712b22796b98a09f4b58e7d06d03c9", - "parent_gene": "", - "protein_md5": "f7565c17b3101661253fed8ad4db8ecc", - "protein_translation": "MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWFANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFRVGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEELGISRAQFDQFLRMMQGGAQFGGGYQQQTGGGNWQQAQRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK", - "protein_translation_length": 271, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yabP" - ], - [ - "gene_synonym", - "yabQ" - ], - [ - "gene_synonym", - "b4659" - ], - [ - "gene_synonym", - "ASAP:ABE-0000194" - ], - [ - "gene_synonym", - "JW0055" - ], - [ - "gene_synonym", - "GeneID:944776" - ], - [ - "gene_synonym", - "ECK0057" - ], - [ - "gene_synonym", - "EcoGene:EG12610" - ], - [ - "gene_synonym", - "ASAP:ABE-0000192" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39220" - ] - ], - "dna_sequence": "ATGAAAGTATCAGTTCCAGGCATGCCGGTTACACTTTTAAATATGAGCAAGAACGATATTTATAAGATGGTGAGCGGGGACAAGATGGACGTGAAGATGAATATCTTTCAACGCTTGTGGGAGACGTTACGCCATCTGTTCTGGTCAGATAAACAGACTGAGGCTTATAAACTTCTGTTCAATTTCGTGAATAACCAGACTGGCAACATCAACGCCTCAGAATACTTTACTGGGGCTATCAACGAGAATGAGAGAGAAAAGTTTATCAATAGCCTGGAATTATTCAATAAACTTAAAACATGCGCAAAAAATCCGGATGAGTTGGTCGCAAAGGGCAATATGCGCTGGGTCGCCCAGACCTTCGGGGATATCGAGTTAAGTGTCACTTTTTTCATTGAAAAGAATAAGATATGTACTCAGACGTTGCAGCTGCATAAGGGCCAAGGTAACTTGGGCGTTGATCTTAGAAAGGCTTACCTTCCCGGCGTTGACATGAGGGATTGTTACCTTGGTAAAAAAACAATGAAAGGTAGCAATGATATCCTTTATGAGAGACCTGGGTGGAATGCTAACCTGGGCCGTGCTACCCCGGACGGTGCTACCCCGGACGGTGCTAACCCGGACGGTGCTAACCTGGACGGTGCTACCGTGAACGGTGCTACCTCCTTATATGATGAGGTAATTATTATTAATAAAATCCCCCCCAAAAAAATTGATACTAAAGGAGTTGCTACTGAAGAAGTTGCTACTAAAAAAGTACTGCTGAACAAATTACTGACAACGCAATTATTGAATGAGCCAGAATAA", - "dna_sequence_length": 807, - "id": "CDS_55", - "location": [ - [ - "NC_000913", - 58474, - "+", - 579 - ], - [ - "NC_000913", - 59052, - "+", - 228 - ] - ], - "md5": "3fcb32319692c6079ea3bc34335f9e91", - "parent_gene": "", - "protein_md5": "b71018680a2134cfc6cb2e535222275e", - "protein_translation": "MKVSVPGMPVTLLNMSKNDIYKMVSGDKMDVKMNIFQRLWETLRHLFWSDKQTEAYKLLFNFVNNQTGNINASEYFTGAINENEREKFINSLELFNKLKTCAKNPDELVAKGNMRWVAQTFGDIELSVTFFIEKNKICTQTLQLHKGQGNLGVDLRKAYLPGVDMRDCYLGKKTMKGSNDILYERPGWNANLGRATPDGATPDGANPDGANLDGATVNGATSLYDEVIIINKIPPKKIDTKGVATEEVATKKVLLNKLLTTQLLNEPE", - "protein_translation_length": 268, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0057" - ], - [ - "gene_synonym", - "ASAP:ABE-0000196" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA37" - ], - [ - "gene_synonym", - "GeneID:946262" - ], - [ - "gene_synonym", - "b0058" - ], - [ - "gene_synonym", - "NP_414600.1" - ], - [ - "gene_synonym", - "rluA" - ], - [ - "gene_synonym", - "GI:16128052" - ], - [ - "gene_synonym", - "EcoGene:EG12609" - ], - [ - "gene_synonym", - "ECK0059" - ], - [ - "gene_synonym", - "yabO" - ] - ], - "dna_sequence": "ATGGGGATGGAAAACTACAATCCACCGCAGGAACCCTGGTTGGTTATCCTGTATCAGGATGACCATATTATGGTGGTCAACAAGCCGAGCGGTTTGTTGTCAGTGCCGGGTCGTCTGGAAGAGCACAAAGACAGCGTGATGACGCGCATTCAGCGTGATTATCCGCAGGCAGAATCGGTGCATCGTCTGGATATGGCTACCAGCGGCGTGATTGTAGTGGCGCTGACCAAAGCCGCGGAGCGGGAGTTAAAACGCCAGTTCCGCGAGCGCGAGCCGAAAAAGCAGTATGTGGCCCGCGTCTGGGGGCATCCATCCCCCGCAGAAGGTCTGGTGGATCTGCCGCTGATTTGCGACTGGCCAAACCGCCCGAAACAGAAAGTCTGTTACGAAACGGGTAAACCTGCGCAGACGGAATATGAAGTGGTGGAGTATGCGGCGGATAACACGGCAAGAGTGGTGTTAAAACCGATTACCGGGCGTTCGCATCAATTGCGTGTGCATATGCTGGCGCTGGGTCATCCGATTCTCGGCGATCGTTTTTATGCATCACCAGAAGCGAGAGCGATGGCACCACGTTTGTTGCTACATGCAGAGATGTTGACGATTACCCATCCGGCGTATGGCAATAGTATGACGTTTAAAGCGCCAGCGGATTTTTAA", - "dna_sequence_length": 660, - "functions": [ - "dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent" - ], - "id": "CDS_56", - "location": [ - [ - "NC_000913", - 60346, - "-", - 660 - ] - ], - "md5": "884b8f548dcc37564b06b5154e58cca4", - "parent_gene": "", - "protein_md5": "0de6f5d10286a29a72ae672024d23f37", - "protein_translation": "MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPADF", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000198" - ], - [ - "gene_synonym", - "JW0058" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60240" - ], - [ - "gene_synonym", - "hepA" - ], - [ - "gene_synonym", - "yabA" - ], - [ - "gene_synonym", - "NP_414601.1" - ], - [ - "gene_synonym", - "b0059" - ], - [ - "gene_synonym", - "EcoGene:EG11083" - ], - [ - "gene_synonym", - "rapA" - ], - [ - "gene_synonym", - "GeneID:948523" - ], - [ - "gene_synonym", - "GI:16128053" - ], - [ - "gene_synonym", - "ECK0060" - ] - ], - "dna_sequence": "ATGCCTTTTACACTTGGTCAACGCTGGATCAGCGATACAGAAAGCGAATTGGGACTTGGAACCGTTGTCGCGGTGGATGCGCGAACTGTCACTTTACTTTTCCCATCTACTGGTGAAAACCGTCTGTACGCACGCAGTGATTCCCCCGTGACCCGCGTGATGTTCAACCCTGGTGATACCATTACCAGCCATGACGGCTGGCAGATGCAAGTCGAAGAAGTAAAAGAAGAAAATGGCTTGCTGACCTATATCGGTACTCGCCTGGATACTGAAGAGTCCGGCGTAGCCCTGCGTGAAGTTTTCCTTGATAGCAAACTGGTGTTCAGCAAACCGCAGGACCGTCTGTTTGCCGGGCAGATTGACCGTATGGACCGCTTTGCGCTGCGTTATCGCGCGCGTAAATATTCCAGCGAACAGTTCCGTATGCCGTACAGCGGCCTGCGCGGTCAGCGTACCAGCCTGATCCCGCATCAGCTCAACATCGCTCATGATGTTGGTCGCCGCCACGCGCCGCGCGTCCTGCTGGCTGACGAAGTGGGTTTAGGGAAAACCATTGAAGCCGGGATGATCCTGCATCAGCAACTGCTCTCTGGCGCTGCTGAACGTGTGCTAATTATCGTCCCGGAAACCTTACAGCATCAGTGGCTGGTAGAAATGCTGCGCCGTTTCAACCTGCGCTTTGCGCTATTTGATGATGAGCGTTATGCCGAAGCTCAGCACGATGCTTACAACCCGTTTGACACCGAACAGCTGGTGATTTGCTCGCTGGATTTTGCCCGTCGTAGCAAACAGCGCCTGGAACATCTCTGTGAAGCCGAATGGGACCTGCTGGTGGTCGATGAAGCGCATCACCTGGTGTGGAGCGAAGATGCGCCAAGCCGTGAATATCAGGCCATTGAACAACTGGCAGAGCACGTGCCGGGCGTTCTGCTGCTGACCGCGACCCCGGAACAGCTGGGGATGGAAAGCCACTTCGCCCGTCTGCGTCTGCTGGACCCGAACCGTTTCCACGATTTTGCGCAGTTCGTTGAAGAGCAGAAAAATTATCGTCCGGTTGCGGACGCCGTTGCCATGCTGCTGGCAGGTAACAAACTGAGCAATGACGAACTGAACATGCTCGGCGAGATGATCGGCGAGCAGGATATCGAGCCGCTGTTGCAGGCAGCAAACAGCGACAGCGAAGATGCCCAGAGCGCCCGTCAGGAGCTGGTTTCGATGCTGATGGATCGCCACGGCACCAGCCGCGTGCTGTTCCGTAACACGCGTAACGGTGTGAAAGGATTCCCGAAACGCGAGCTGCACACCATTAAGCTGCCGCTACCGACGCAGTATCAGACGGCTATTAAAGTCTCCGGCATTATGGGCGCACGTAAAAGTGCGGAAGATCGTGCTCGCGATATGCTCTACCCGGAGCGTATTTATCAGGAATTTGAAGGTGATAACGCCACCTGGTGGAACTTCGATCCGCGCGTTGAGTGGCTGATGGGCTACCTGACCAGCCATCGCTCTCAGAAAGTGCTGGTGATCTGCGCCAAAGCTGCCACTGCGCTGCAACTGGAGCAGGTACTGCGCGAACGTGAAGGTATTCGCGCTGCGGTGTTCCACGAAGGTATGTCGATTATCGAACGTGACCGCGCTGCCGCCTGGTTTGCCGAAGAAGACACCGGCGCACAGGTACTGCTGTGCTCAGAAATCGGTTCTGAAGGACGTAACTTCCAGTTCGCCAGCCACATGGTGATGTTTGACCTGCCATTCAACCCGGATCTACTGGAGCAGCGTATTGGTCGTCTGGATCGTATCGGCCAGGCGCACGATATTCAGATCCATGTGCCTTATCTGGAGAAAACCGCTCAGTCGGTGCTGGTGCGCTGGTATCACGAAGGTCTGGATGCATTTGAGCACACCTGCCCGACCGGACGCACTATTTACGATAGCGTATACAACGATCTGATTAACTATCTGGCTTCACCGGATCAAACCGAAGGCTTTGACGATCTGATCAAAAACTGCCGCGAGCAACATGAAGCGCTGAAAGCACAGCTGGAACAGGGTCGTGACCGCCTGCTGGAAATCCACTCCAACGGTGGCGAAAAAGCCCAGGCACTGGCAGAAAGCATTGAAGAGCAGGATGACGATACCAACCTGATCGCCTTCGCCATGAACCTGTTCGATATTATCGGTATCAATCAGGACGATCGCGGCGACAACATGATCGTGCTGACGCCGTCCGATCATATGCTGGTGCCGGACTTCCCTGGCCTGTCGGAAGATGGCATCACCATCACCTTTGATCGTGAAGTGGCGCTGGCGCGTGAAGATGCACAGTTTATTACCTGGGAGCATCCGCTGATCCGCAACGGTCTGGATCTGATCCTTTCTGGCGATACCGGTAGCAGCACGATTTCACTGTTAAAAAACAAAGCGTTGCCGGTAGGTACGCTGTTGGTGGAACTGATTTATGTGGTTGAAGCCCAGGCTCCGAAGCAGTTGCAGCTCAACCGCTTCCTGCCACCGACGCCGGTACGTATGCTGCTGGATAAAAACGGCAACAACCTGGCGGCGCAGGTAGAGTTTGAAACCTTTAACCGCCAGCTTAACGCGGTTAACCGTCACACCGGCAGCAAACTGGTTAACGCCGTGCAGCAGGATGTTCACGCTATCCTTCAACTGGGTGAAGCGCAGATCGAGAAATCTGCCCGTGCATTGATTGATGCAGCGCGTAACGAAGCCGACGAAAAACTGTCTGCCGAGCTGTCTCGTCTGGAAGCTCTGCGTGCAGTGAACCCGAACATTCGTGACGACGAACTGACCGCCATTGAGAGCAACCGTCAGCAGGTAATGGAAAGCCTGGATCAGGCAGGTTGGCGTCTGGATGCCCTGCGTTTGATCGTTGTAACGCATCAGTAA", - "dna_sequence_length": 2907, - "functions": [ - "RNA polymerase remodeling/recycling factor ATPase", - "RNA polymerase-associated, ATP-dependent RNA translocase" - ], - "id": "CDS_57", - "location": [ - [ - "NC_000913", - 63264, - "-", - 2907 - ] - ], - "md5": "a9eae956a6179272d28093c54026de87", - "parent_gene": "", - "protein_md5": "1c7cff5567c19190aa0e69381c500868", - "protein_translation": "MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ", - "protein_translation_length": 968, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414602.1" - ], - [ - "gene_synonym", - "dinA" - ], - [ - "gene_synonym", - "EcoGene:EG10747" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21189" - ], - [ - "gene_synonym", - "JW0059" - ], - [ - "gene_synonym", - "GeneID:944779" - ], - [ - "gene_synonym", - "b0060" - ], - [ - "gene_synonym", - "polB" - ], - [ - "gene_synonym", - "ASAP:ABE-0000202" - ], - [ - "gene_synonym", - "GI:16128054" - ], - [ - "gene_synonym", - "ECK0061" - ] - ], - "dna_sequence": "GTGGCGCAGGCAGGTTTTATCTTAACCCGACACTGGCGGGACACCCCGCAAGGGACAGAAGTCTCCTTCTGGCTGGCGACGGACAACGGGCCGTTGCAGGTTACGCTTGCACCGCAAGAGTCCGTGGCGTTTATTCCCGCCGATCAGGTTCCCCGCGCTCAGCATATTTTGCAGGGTGAACAAGGCTTTCGCCTGACACCGCTGGCGTTAAAGGATTTTCACCGCCAGCCGGTGTATGGCCTTTACTGTCGCGCCCATCGCCAATTGATGAATTACGAAAAGCGCCTGCGTGAAGGTGGCGTTACCGTCTACGAGGCCGATGTGCGTCCGCCAGAACGCTATCTGATGGAGCGGTTTATCACCTCACCGGTGTGGGTCGAGGGTGATATGCACAATGGCACTATCGTTAATGCCCGTCTGAAACCGCATCCCGACTATCGTCCGCCGCTCAAGTGGGTTTCTATAGATATTGAAACCACCCGCCACGGTGAGCTGTACTGCATCGGCCTGGAAGGCTGCGGGCAGCGCATCGTTTATATGCTGGGGCCGGAGAATGGCGACGCCTCCTCGCTTGATTTCGAACTGGAATACGTCGCCAGCCGCCCGCAGTTGCTGGAAAAACTCAACGCCTGGTTTGCCAACTACGATCCTGATGTGATCATCGGTTGGAACGTGGTGCAGTTCGATCTGCGAATGCTGCAAAAACATGCCGAGCGTTACCGTCTTCCGCTGCGTCTTGGGCGCGATAATAGCGAGCTGGAGTGGCGCGAGCACGGCTTTAAAAACGGCGTCTTTTTTGCCCAGGCTAAAGGTCGGCTAATTATCGACGGTATCGAGGCGCTGAAATCCGCGTTCTGGAATTTCTCTTCATTCTCGCTGGAAACTGTCGCTCAGGAGCTATTAGGCGAAGGAAAATCTATCGATAACCCGTGGGATCGAATGGACGAAATTGACCGCCGTTTCGCCGAAGATAAACCTGCGCTGGCAACTTATAACCTGAAAGATTGCGAGCTGGTGACGCAGATCTTCCACAAAACTGAAATCATGCCATTTTTACTCGAACGGGCAACGGTGAACGGCCTGCCGGTGGACCGACACGGCGGTTCGGTGGCGGCATTTGGTCATCTCTATTTTCCGCGAATGCATCGCGCTGGTTATGTCGCGCCTAATCTCGGCGAAGTGCCGCCGCACGCCAGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGTACCCGTCGATCATCCGCACCTTTCTGATTGATCCCGTCGGGCTGGTGGAAGGCATGGCGCAGCCTGATCCAGAGCACAGTACCGAAGGTTTTCTCGATGCCTGGTTCTCGCGAGAAAAACATTGCCTGCCGGAGATTGTGACTAACATCTGGCACGGGCGCGATGAAGCCAAACGCCAGGGTAACAAACCGCTGTCGCAGGCGCTGAAAATCATCATGAATGCCTTTTATGGCGTGCTCGGCACCACCGCCTGCCGCTTCTTCGATCCGCGGCTGGCATCGTCGATCACCATGCGTGGTCATCAGATCATGCGGCAAACCAAAGCGTTGATTGAAGCACAGGGCTACGACGTTATCTACGGCGATACCGACTCAACGTTTGTCTGGCTGAAAGGCGCACATTCGGAAGAAGAAGCGGCGAAAATCGGTCGTGCACTGGTGCAGCACGTTAACGCCTGGTGGGCGGAAACGCTGCAAAAACAACGGCTGACCAGCGCATTAGAACTGGAGTATGAAACCCATTTCTGCCGTTTTCTGATGCCAACCATTCGCGGAGCCGATACCGGCAGTAAAAAGCGTTATGCCGGACTGATTCAGGAGGGCGACAAGCAGCGGATGGTGTTTAAAGGGCTGGAAACCGTGCGCACCGACTGGACGCCGCTGGCCCAGCAGTTTCAGCAGGAGCTATACCTGCGCATCTTCCGCAACGAGCCATATCAGGAATATGTACGCGAAACCATCGACAAACTGATGGCGGGTGAACTGGATGCGCGACTGGTTTACCGTAAACGCCTTCGCCGTCCGCTGAGCGAGTATCAGCGTAATGTGCCGCCTCATGTACGCGCCGCTCGCCTTGCCGATGAAGAAAACCAAAAGCGTGGTCGCCCCTTGCAATATCAGAATCGCGGCACCATTAAGTACGTATGGACCACCAACGGCCCGGAGCCGCTGGACTACCAACGTTCACCACTGGATTACGAACACTATCTGACCCGCCAGCTACAACCCGTGGCGGAGGGAATACTCCCTTTTATTGAGGATAATTTTGCTACACTTATGACCGGGCAACTTGGGCTATTTTGA", - "dna_sequence_length": 2352, - "functions": [ - "DNA polymerase II" - ], - "id": "CDS_58", - "location": [ - [ - "NC_000913", - 65780, - "-", - 2352 - ] - ], - "md5": "0414c1277b6522e9c93a1d1124c1b35d", - "parent_gene": "", - "protein_md5": "9debf28c696e3e5f09e76693104c59bf", - "protein_translation": "MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF", - "protein_translation_length": 783, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414603.1" - ], - [ - "gene_synonym", - "EcoGene:EG10055" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08203" - ], - [ - "gene_synonym", - "ASAP:ABE-0000209" - ], - [ - "gene_synonym", - "b0061" - ], - [ - "gene_synonym", - "araD" - ], - [ - "gene_synonym", - "JW0060" - ], - [ - "gene_synonym", - "GeneID:945294" - ], - [ - "gene_synonym", - "GI:16128055" - ], - [ - "gene_synonym", - "ECK0062" - ] - ], - "dna_sequence": "ATGTTAGAAGATCTCAAACGCCAGGTATTAGAAGCCAACCTGGCGCTGCCAAAACACAACCTGGTCACGCTCACATGGGGCAACGTCAGCGCCGTTGATCGCGAGCGCGGCGTCTTTGTGATCAAACCTTCCGGCGTCGATTACAGCGTCATGACCGCTGACGATATGGTCGTGGTTAGCATCGAAACCGGTGAAGTGGTTGAAGGTACGAAAAAGCCCTCCTCCGACACGCCAACTCACCGGCTGCTCTATCAGGCATTCCCCTCCATTGGCGGCATTGTGCATACGCACTCGCGCCACGCCACCATCTGGGCGCAGGCGGGTCAGTCGATTCCAGCAACCGGCACCACCCACGCCGACTATTTCTACGGCACCATTCCCTGCACCCGCAAAATGACCGACGCAGAAATCAACGGCGAATATGAGTGGGAAACCGGTAACGTCATCGTAGAAACCTTTGAAAAACAGGGTATCGATGCAGCGCAAATGCCCGGCGTTCTGGTCCATTCCCACGGCCCGTTTGCATGGGGCAAAAATGCCGAAGATGCGGTGCATAACGCCATCGTGCTGGAAGAGGTCGCTTATATGGGGATATTCTGCCGTCAGTTAGCGCCGCAGTTACCGGATATGCAGCAAACGCTGCTGGATAAACACTATCTGCGTAAGCATGGCGCGAAGGCATATTACGGGCAGTAA", - "dna_sequence_length": 696, - "functions": [ - "L-ribulose-5-phosphate 4-epimerase" - ], - "id": "CDS_59", - "location": [ - [ - "NC_000913", - 66550, - "-", - 696 - ] - ], - "md5": "b952e0abbf58e03aaa3b308e34530868", - "parent_gene": "", - "protein_md5": "aa2874f655af5247e303666bed22cea2", - "protein_translation": "MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000221" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08202" - ], - [ - "gene_synonym", - "GeneID:947511" - ], - [ - "gene_synonym", - "NP_414604.1" - ], - [ - "gene_synonym", - "GI:16128056" - ], - [ - "gene_synonym", - "araA" - ], - [ - "gene_synonym", - "b0062" - ], - [ - "gene_synonym", - "JW0061" - ], - [ - "gene_synonym", - "ECK0063" - ], - [ - "gene_synonym", - "EcoGene:EG10052" - ] - ], - "dna_sequence": "ATGACGATTTTTGATAATTATGAAGTGTGGTTTGTCATTGGCAGCCAGCATCTGTATGGCCCGGAAACCCTGCGTCAGGTCACCCAACATGCCGAGCACGTCGTTAATGCGCTGAATACGGAAGCGAAACTGCCCTGCAAACTGGTGTTGAAACCGCTGGGCACCACGCCGGATGAAATCACCGCTATTTGCCGCGACGCGAATTACGACGATCGTTGCGCTGGTCTGGTGGTGTGGCTGCACACCTTCTCCCCGGCCAAAATGTGGATCAACGGCCTGACCATGCTCAACAAACCGTTGCTGCAATTCCACACCCAGTTCAACGCGGCGCTGCCGTGGGACAGTATCGATATGGACTTTATGAACCTGAACCAGACTGCACATGGCGGTCGCGAGTTCGGCTTCATTGGCGCGCGTATGCGTCAGCAACATGCCGTGGTTACCGGTCACTGGCAGGATAAACAAGCCCATGAGCGTATCGGCTCCTGGATGCGTCAGGCGGTCTCTAAACAGGATACCCGTCATCTGAAAGTCTGCCGATTTGGCGATAACATGCGTGAAGTGGCGGTCACCGATGGCGATAAAGTTGCCGCACAGATCAAGTTCGGTTTCTCCGTCAATACCTGGGCGGTTGGCGATCTGGTGCAGGTGGTGAACTCCATCAGCGACGGCGATGTTAACGCGCTGGTCGATGAGTACGAAAGCTGCTACACCATGACGCCTGCCACACAAATCCACGGCAAAAAACGACAGAACGTGCTGGAAGCGGCGCGTATTGAGCTGGGGATGAAGCGTTTCCTGGAACAAGGTGGCTTCCACGCGTTCACCACCACCTTTGAAGATTTGCACGGTCTGAAACAGCTTCCTGGTCTGGCCGTACAGCGTCTGATGCAGCAGGGTTACGGCTTTGCGGGCGAAGGCGACTGGAAAACTGCCGCCCTGCTTCGCATCATGAAGGTGATGTCAACCGGTCTGCAGGGCGGCACCTCCTTTATGGAGGACTACACCTATCACTTCGAGAAAGGTAATGACCTGGTGCTCGGCTCCCATATGCTGGAAGTCTGCCCGTCGATCGCCGCAGAAGAGAAACCGATCCTCGACGTTCAGCATCTCGGTATTGGTGGTAAGGACGATCCTGCCCGCCTGATCTTCAATACCCAAACCGGCCCAGCGATTGTCGCCAGCTTGATTGATCTCGGCGATCGTTACCGTCTACTGGTTAACTGCATCGACACGGTGAAAACACCGCACTCCCTGCCGAAACTGCCGGTGGCGAATGCGCTGTGGAAAGCGCAACCGGATCTGCCAACTGCTTCCGAAGCGTGGATCCTCGCTGGTGGCGCGCACCATACCGTCTTCAGCCATGCACTGAACCTCAACGATATGCGCCAATTCGCCGAGATGCACGACATTGAAATCACGGTGATTGATAACGACACACGCCTGCCAGCGTTTAAAGACGCGCTGCGCTGGAACGAAGTGTATTACGGGTTTCGTCGCTAA", - "dna_sequence_length": 1503, - "functions": [ - "L-arabinose isomerase" - ], - "id": "CDS_60", - "location": [ - [ - "NC_000913", - 68337, - "-", - 1503 - ] - ], - "md5": "6d69b48b82c9b2ebfc7f9de97959597d", - "parent_gene": "", - "protein_md5": "d10df6959beed111ac1348858e76d3ae", - "protein_translation": "MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMTPATQIHGKKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAAEEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR", - "protein_translation_length": 500, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000223" - ], - [ - "gene_synonym", - "EcoGene:EG10053" - ], - [ - "gene_synonym", - "GeneID:946017" - ], - [ - "gene_synonym", - "araB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08204" - ], - [ - "gene_synonym", - "b0063" - ], - [ - "gene_synonym", - "NP_414605.1" - ], - [ - "gene_synonym", - "GI:16128057" - ], - [ - "gene_synonym", - "ECK0064" - ], - [ - "gene_synonym", - "JW0062" - ] - ], - "dna_sequence": "ATGGCGATTGCAATTGGCCTCGATTTTGGCAGTGATTCTGTGCGAGCTTTGGCGGTGGACTGCGCTACCGGTGAAGAGATCGCCACCAGCGTAGAGTGGTATCCCCGTTGGCAGAAAGGGCAATTTTGTGATGCCCCGAATAACCAGTTCCGTCATCATCCGCGTGACTACATTGAGTCAATGGAAGCGGCACTGAAAACCGTGCTTGCAGAGCTTAGCGTCGAACAGCGCGCAGCTGTGGTCGGGATTGGCGTTGACAGTACCGGCTCGACGCCCGCACCGATTGATGCCGACGGAAACGTGCTGGCGCTGCGCCCGGAGTTTGCCGAAAACCCGAACGCGATGTTCGTATTGTGGAAAGACCACACTGCGGTTGAAGAAGCGGAAGAGATTACCCGTTTGTGCCACGCGCCGGGCAACGTTGACTACTCCCGCTACATTGGTGGTATTTATTCCAGCGAATGGTTCTGGGCAAAAATCCTGCATGTGACTCGCCAGGACAGCGCCGTGGCGCAATCTGCCGCATCGTGGATTGAGCTGTGCGACTGGGTGCCAGCTCTGCTTTCCGGTACCACCCGCCCGCAGGATATTCGTCGCGGACGTTGCAGCGCCGGGCATAAATCTCTGTGGCACGAAAGCTGGGGCGGCCTGCCGCCAGCCAGTTTCTTTGATGAGCTGGACCCGATCCTCAATCGCCATTTGCCTTCCCCGCTGTTCACTGACACTTGGACTGCCGATATTCCGGTGGGCACCTTATGCCCGGAATGGGCGCAGCGTCTCGGCCTGCCTGAAAGCGTGGTGATTTCCGGCGGCGCGTTTGACTGCCATATGGGCGCAGTTGGCGCAGGCGCACAGCCTAACGCACTGGTAAAAGTTATCGGTACTTCCACCTGCGACATTCTGATTGCCGACAAACAGAGCGTTGGCGAGCGGGCAGTTAAAGGTATTTGCGGTCAGGTTGATGGCAGCGTGGTGCCTGGATTTATCGGTCTGGAAGCAGGCCAATCGGCGTTTGGTGATATCTACGCCTGGTTTGGTCGCGTACTCGGCTGGCCGCTGGAACAGCTTGCCGCCCAGCATCCGGAACTGAAAACGCAAATCAACGCCAGCCAGAAACAACTGCTTCCGGCGCTGACCGAAGCATGGGCCAAAAATCCGTCTCTGGATCACCTGCCGGTGGTGCTCGACTGGTTTAACGGCCGCCGCACACCGAACGCTAACCAACGCCTGAAAGGGGTGATTACCGATCTTAACCTCGCTACCGACGCTCCGCTGCTGTTCGGCGGTTTGATTGCTGCCACCGCCTTTGGCGCACGCGCAATCATGGAGTGCTTTACCGATCAGGGGATCGCCGTTAATAACGTGATGGCACTGGGCGGCATCGCGCGGAAAAACCAGGTCATTATGCAGGCCTGCTGCGACGTGCTGAATCGCCCGCTGCAAATTGTTGCCTCTGACCAGTGCTGTGCGCTCGGTGCGGCGATTTTTGCTGCCGTCGCCGCGAAAGTGCACGCAGACATCCCATCAGCTCAGCAAAAAATGGCCAGTGCGGTAGAGAAAACCCTGCAACCGTGCAGCGAGCAGGCACAACGCTTTGAACAGCTTTATCGCCGCTATCAGCAATGGGCGATGAGCGCCGAACAACACTATCTTCCAACTTCCGCCCCGGCACAGGCTGCCCAGGCCGTTGCGACTCTATAA", - "dna_sequence_length": 1701, - "functions": [ - "L-ribulokinase" - ], - "id": "CDS_61", - "location": [ - [ - "NC_000913", - 70048, - "-", - 1701 - ] - ], - "md5": "b98bcedac009dea57897d14145065c6a", - "parent_gene": "", - "protein_md5": "4b33d67a267b14f04ea898f6d58ceccc", - "protein_translation": "MAIAIGLDFGSDSVRALAVDCATGEEIATSVEWYPRWQKGQFCDAPNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVLALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKILHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLPPASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAGQSAFGDIYAWFGRVLGWPLEQLAAQHPELKTQINASQKQLLPALTEAWAKNPSLDHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGIAVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIPSAQQKMASAVEKTLQPCSEQAQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVATL", - "protein_translation_length": 566, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10054" - ], - [ - "gene_synonym", - "ASAP:ABE-0000236" - ], - [ - "gene_synonym", - "b0064" - ], - [ - "gene_synonym", - "GeneID:944780" - ], - [ - "gene_synonym", - "araC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9E0" - ], - [ - "gene_synonym", - "GI:16128058" - ], - [ - "gene_synonym", - "NP_414606.1" - ], - [ - "gene_synonym", - "JW0063" - ], - [ - "gene_synonym", - "ECK0065" - ] - ], - "dna_sequence": "ATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAACGCCCATCTGGTGGCGGGTTTAACGCCGATTGAGGCCAACGGTTATCTCGATTTTTTTATCGACCGACCGCTGGGAATGAAAGGTTATATTCTCAATCTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGTTCCCGCCAGGAGAGATTCATCACTACGGTCGTCATCCGGAGGCTCGCGAATGGTATCACCAGTGGGTTTACTTTCGTCCGCGCGCCTACTGGCATGAATGGCTTAACTGGCCGTCAATATTTGCCAATACGGGTTTCTTTCGCCCGGATGAAGCGCACCAGCCGCATTTCAGCGACCTGTTTGGGCAAATCATTAACGCCGGGCAAGGGGAAGGGCGCTATTCGGAGCTGCTGGCGATAAATCTGCTTGAGCAATTGTTACTGCGGCGCATGGAAGCGATTAACGAGTCGCTCCATCCACCGATGGATAATCGGGTACGCGAGGCTTGTCAGTACATCAGCGATCACCTGGCAGACAGCAATTTTGATATCGCCAGCGTCGCACAGCATGTTTGCTTGTCGCCGTCGCGTCTGTCACATCTTTTCCGCCAGCAGTTAGGGATTAGCGTCTTAAGCTGGCGCGAGGACCAACGCATTAGTCAGGCGAAGCTGCTTTTGAGCACTACCCGGATGCCTATCGCCACCGTCGGTCGCAATGTTGGTTTTGACGATCAACTCTATTTCTCGCGAGTATTTAAAAAATGCACCGGGGCCAGCCCGAGCGAGTTTCGTGCCGGTTGTGAAGAAAAAGTGAATGATGTAGCCGTCAAGTTGTCATAA", - "dna_sequence_length": 879, - "functions": [ - "ara regulon transcriptional activator", - "autorepressor" - ], - "id": "CDS_62", - "location": [ - [ - "NC_000913", - 70387, - "+", - 879 - ] - ], - "md5": "d65d4b4c69ea9938089bbe9685e3762e", - "parent_gene": "", - "protein_md5": "83ca0f6b434d115c2d3a74bfc12a9eda", - "protein_translation": "MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRAYWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLLLRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRAGCEEKVNDVAVKLS", - "protein_translation_length": 292, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30149" - ], - [ - "gene_synonym", - "NP_414607.1" - ], - [ - "gene_synonym", - "JW5005" - ], - [ - "gene_synonym", - "EcoGene:EG11571" - ], - [ - "gene_synonym", - "GeneID:944783" - ], - [ - "gene_synonym", - "b0065" - ], - [ - "gene_synonym", - "ASAP:ABE-0000241" - ], - [ - "gene_synonym", - "GI:16128059" - ], - [ - "gene_synonym", - "ECK0066" - ], - [ - "gene_synonym", - "yabI" - ] - ], - "dna_sequence": "ATGCAAGCATTGCTGGAACACTTTATTACCCAATCCACCGTGTATTCATTGATGGCGGTGGTGTTGGTGGCCTTTCTGGAGTCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTATTGGCTGCTTGATGGGCGACTGGATTTCTTTCTGGCTGGGTTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCACTACTTGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTTATTACGCCGAATATTATCGGCTGCCTGCTGTGGCCGCCGTTTTACTTCCTGCCAGGGATTCTGGCGGGCGCGGCGATCGATATTCCTGCCGGAATGCAGAGCGGTGAGTTTAAATGGTTGCTGCTGGCAACAGCGGTGTTTTTGTGGGTTGGTGGCTGGCTGTGCTGGCGGTTATGGCGCAGCGGTAAAGCGACTGACCGTTTGAGTCATTATTTGTCCCGCGGTCGTTTGTTGTGGCTGACGCCGTTGATTTCTGCCATCGGCGTGGTGGCGCTGGTGGTGTTAATTCGCCACCCGTTGATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAG", - "dna_sequence_length": 765, - "functions": [ - "DedA family inner membrane protein" - ], - "id": "CDS_63", - "location": [ - [ - "NC_000913", - 71351, - "+", - 765 - ] - ], - "md5": "ab7eeb94c0fd7f42b08193b91561c130", - "parent_gene": "", - "protein_md5": "7bdc1bf59644bfb4c77a35bb5838b41b", - "protein_translation": "MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIIGCLMGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV", - "protein_translation_length": 254, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128060" - ], - [ - "gene_synonym", - "EcoGene:EG11572" - ], - [ - "gene_synonym", - "thiQ" - ], - [ - "gene_synonym", - "NP_414608.1" - ], - [ - "gene_synonym", - "b0066" - ], - [ - "gene_synonym", - "ASAP:ABE-0000244" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31548" - ], - [ - "gene_synonym", - "ECK0067" - ], - [ - "gene_synonym", - "yabJ" - ], - [ - "gene_synonym", - "JW0065" - ], - [ - "gene_synonym", - "GeneID:944785" - ], - [ - "gene_synonym", - "sfuC" - ] - ], - "dna_sequence": "ATGTTAAAACTGACTGATATCACCTGGCTTTACCACCATTTGCCGATGCGTTTTAGCTTAACGGTGGAACGCGGCGAGCAGGTGGCGATCCTCGGGCCAAGCGGCGCGGGTAAAAGTACCCTGCTGAATTTGATCGCCGGTTTTCTGACGCCAGCCAGCGGTTCGCTGACTATCGATGGCGTAGATCACACAACTATGCCGCCGTCACGCCGTCCGGTGTCGATGCTGTTTCAGGAGAACAACCTGTTCAGCCACCTGACGGTCGCACAGAACATCGGGCTGGGGCTAAATCCGGGATTGAAACTGAACGCGGTACAGCAGGGGAAAATGCACGCTATCGCCCGCCAGATGGGGATTGATAATTTAATGGCGCGGTTACCGGGCGAGCTTTCCGGCGGTCAGCGACAGCGAGTGGCGTTAGCGCGTTGTCTGGTACGCGAACAGCCGATTTTATTGCTCGATGAACCGTTCTCTGCGCTCGATCCGGCGTTACGTCAGGAGATGTTGACGCTGGTGAGCACGAGCTGCCAGCAGCAAAAAATGACGCTATTGATGGTGTCGCACAGCGTGGAAGATGCGGCGCGGATCGCCACGCGCTCGGTAGTAGTCGCCGACGGGCGCATCGCCTGGCAGGGTATGACCAATGAGTTGTTGAGCGGTAAGGCGAGTGCTTCGGCACTATTGGGGATTACGGGTTAG", - "dna_sequence_length": 699, - "functions": [ - "thiamine/thiamine pyrophosphate ABC transporter ATPase" - ], - "id": "CDS_64", - "location": [ - [ - "NC_000913", - 72927, - "-", - 699 - ] - ], - "md5": "b0af869907529651c86d6e26535d0c9e", - "parent_gene": "", - "protein_md5": "06c9588bcc6976883e1948953189ed41", - "protein_translation": "MLKLTDITWLYHHLPMRFSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTIDGVDHTTMPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAVQQGKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGMTNELLSGKASASALLGITG", - "protein_translation_length": 232, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944784" - ], - [ - "gene_synonym", - "NP_414609.1" - ], - [ - "gene_synonym", - "GI:16128061" - ], - [ - "gene_synonym", - "EcoGene:EG11573" - ], - [ - "gene_synonym", - "thiP" - ], - [ - "gene_synonym", - "b0067" - ], - [ - "gene_synonym", - "ASAP:ABE-0000246" - ], - [ - "gene_synonym", - "ECK0068" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31549" - ], - [ - "gene_synonym", - "yabK" - ], - [ - "gene_synonym", - "sfuB" - ], - [ - "gene_synonym", - "JW0066" - ] - ], - "dna_sequence": "ATGGCAACGCGCCGTCAGCCGTTAATTCCCGGCTGGTTAATTCCAGGTGTAAGCGCCACCACGCTGGTGGTAGCGGTTGCGCTGGCGGCGTTTCTCGCCCTGTGGTGGAACGCGCCGCAGGATGACTGGGTGGCAGTCTGGCAGGACAGCTATCTGTGGCATGTGGTGCGCTTCTCCTTCTGGCAGGCGTTTCTCTCGGCACTGCTCTCTGTCATACCCGCGATATTCCTCGCCCGCGCGCTCTATCGCAGGCGCTTTCCGGGTCGGCTGGCGCTGTTGCGTCTGTGTGCAATGACCTTGATCCTCCCGGTGTTGGTCGCTGTTTTCGGCATTCTTAGCGTCTATGGTCGCCAGGGCTGGCTGGCAACACTCTGCCAATCGCTCGGTCTGGAGTGGACCTTTTCGCCCTACGGCCTGCAAGGTATTTTGCTGGCCCATGTGTTTTTTAATCTGCCGATGGCGAGCCGCTTATTACTCCAGGCACTGGAAAACATCCCCGGCGAACAGCGTCAACTTGCCGCCCAGCTTGGGATGCGTAGCTGGCATTTTTTCCGCTTCGTCGAATGGCCGTGGTTACGGCGACAAATCCCGCCGGTTGCTGCGCTTATCTTTATGCTCTGTTTCGCCAGCTTCGCCACCGTGCTATCGCTGGGGGGCGGTCCGCAGGCGACCACTATCGAGCTGGCAATCTATCAGGCGCTGAGTTACGACTACGATCCTGCCCGCGCGGCAATGCTGGCGCTGCTCCAGATGGTGTGCTGCCTCGGGCTGGTGCTGTTGAGTCAGCGATTGAGTAAGGCCATTGCGCCCGGCACCACGCTGCTGCAAGGCTGGCGCGACCCGGACGATCGTCTGCATAGCCGCATTTGCGACACGGTGTTAATTGTGCTGGCGCTGCTGCTGTTGCTGCCACCGTTACTGGCGGTGATCGTCGATGGGGTAAATCGCCAGTTGCCGGAAGTGCTGGCACAACCGGTGCTGTGGCAGGCGCTGTGGACCTCGTTGCGTATTGCGCTGGCGGCAGGTGTATTGTGCGTAGTGCTGACCATGATGCTGCTATGGAGCAGTCGCGAACTGCGGGCGCGGCAGAAAATGCTGGCGGGTCAGGTGCTGGAGATGAGCGGCATGTTGATCCTCGCCATGCCGGGGATTGTGCTGGCTACCGGCTTCTTTTTACTGCTCAACAACACTATCGGCCTGCCACAATCTGCTGACGGCATTGTGATTTTCACCAATGCGTTAATGGCGATCCCTTATGCGCTGAAAGTGCTGGAAAACCCGATGCGCGATATCACCGCCCGCTACAGCATGTTATGTCAGTCGCTGGGGATTGAAGGCTGGTCACGCTTAAAAGTGGTGGAGCTGCGCGCCCTGAAACGTCCACTGGCGCAGGCGCTGGCCTTTGCATGCGTGCTGTCGATTGGTGATTTTGGCGTGGTGGCGTTGTTCGGTAACGATGATTTCCGCACCCTGCCGTTTTATCTCTACCAGCAAATTGGCTCCTATCGCAGCCAGGACGGTGCGGTCACCGCGTTAATTCTGCTGCTGCTCTGTTTTCTGCTGTTTACCGTGATTGAAAAACTACCGGGGCGAAATGTTAAAACTGACTGA", - "dna_sequence_length": 1611, - "functions": [ - "thiamine/thiamine pyrophosphate ABC transporter permease" - ], - "id": "CDS_65", - "location": [ - [ - "NC_000913", - 74521, - "-", - 1611 - ] - ], - "md5": "5b52c00046faa26a6efdb3ecb754e1dc", - "parent_gene": "", - "protein_md5": "e67ba22d71ab1fd2ace7b0256be7a79c", - "protein_translation": "MATRRQPLIPGWLIPGVSATTLVVAVALAAFLALWWNAPQDDWVAVWQDSYLWHVVRFSFWQAFLSALLSVIPAIFLARALYRRRFPGRLALLRLCAMTLILPVLVAVFGILSVYGRQGWLATLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQALENIPGEQRQLAAQLGMRSWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPQATTIELAIYQALSYDYDPARAAMLALLQMVCCLGLVLLSQRLSKAIAPGTTLLQGWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTSLRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQVLEMSGMLILAMPGIVLATGFFLLLNNTIGLPQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRLKVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGAVTALILLLLCFLLFTVIEKLPGRNVKTD", - "protein_translation_length": 536, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000249" - ], - [ - "gene_synonym", - "GI:16128062" - ], - [ - "gene_synonym", - "EcoGene:EG11574" - ], - [ - "gene_synonym", - "NP_414610.1" - ], - [ - "gene_synonym", - "b0068" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31550" - ], - [ - "gene_synonym", - "ECK0069" - ], - [ - "gene_synonym", - "thiB" - ], - [ - "gene_synonym", - "GeneID:946306" - ], - [ - "gene_synonym", - "tbpA" - ], - [ - "gene_synonym", - "yabL" - ], - [ - "gene_synonym", - "sfuA" - ], - [ - "gene_synonym", - "JW0067" - ] - ], - "dna_sequence": "GTGTTAAAAAAATGTCTGCCCCTGCTGTTGCTGTGCACAGCGCCCGTTTTCGCTAAACCCGTTCTGACTGTTTATACCTACGATTCCTTCGCCGCCGACTGGGGGCCTGGTCCGGTGGTTAAAAAAGCCTTTGAAGCCGACTGTAATTGCGAACTGAAACTGGTGGCGCTGGAAGATGGCGTTTCGCTTCTCAACCGTCTACGGATGGAAGGCAAAAACAGTAAAGCCGATGTGGTGCTGGGGCTGGATAACAACCTGTTAGACGCCGCCAGTAAAACCGGACTGTTTGCCAAAAGCGGTGTGGCAGCGGATGCCGTTAACGTTCCCGGCGGCTGGAATAATGACACTTTCGTACCGTTTGATTATGGCTACTTCGCCTTCGTTTATGACAAGAACAAACTGAAAAACCCGCCACAAAGCCTGAAAGAACTGGTTGAGAGCGATCAAAACTGGCGGGTGATTTATCAGGATCCGCGCACCAGTACACCGGGGCTGGGTCTGTTGCTATGGATGCAAAAAGTCTATGGCGATGACGCCCCACAAGCCTGGCAGAAACTGGCGAAGAAAACGGTCACGGTCACCAAAGGCTGGAGCGAAGCCTACGGCCTGTTTTTAAAAGGTGAAAGCGATCTGGTACTGAGTTACACCACCTCTCCGGCTTATCACATTCTCGAAGAGAAGAAAGATAACTACGCCGCCGCGAACTTCAGCGAAGGTCACTATCTGCAAGTGGAAGTCGCCGCCCGCACCGCTGCCAGCAAGCAGCCGGAGCTGGCGCAAAAATTCCTCCAGTTTATGGTTTCTCCGGCTTTCCAGAATGCGATCCCAACCGGCAACTGGATGTATCCGGTGGCAAACGTCACGCTGCCTGCCGGTTTTGAAAAATTGACCAAACCCGCAACCACGTTGGAGTTCACGCCAGCCGAAGTGGCGGCACAACGTCAGGCATGGATTAGCGAATGGCAACGCGCCGTCAGCCGTTAA", - "dna_sequence_length": 984, - "functions": [ - "thiamine/thiamine pyrophosphate/thiamine monophosphate ABC transporter periplasmic binding protein" - ], - "id": "CDS_66", - "location": [ - [ - "NC_000913", - 75480, - "-", - 984 - ] - ], - "md5": "81eb1327d7709eae49c1f0aa94a3742f", - "parent_gene": "", - "protein_md5": "6621e2a53c142e7c0bfdc9a1644d2429", - "protein_translation": "MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPVVKKAFEADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVAADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRTSTPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVANVTLPAGFEKLTKPATTLEFTPAEVAAQRQAWISEWQRAVSR", - "protein_translation_length": 327, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414611.1" - ], - [ - "gene_synonym", - "GI:16128063" - ], - [ - "gene_synonym", - "JW0068" - ], - [ - "gene_synonym", - "GeneID:944788" - ], - [ - "gene_synonym", - "sgrR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33595" - ], - [ - "gene_synonym", - "ECK0070" - ], - [ - "gene_synonym", - "ASAP:ABE-0000251" - ], - [ - "gene_synonym", - "EcoGene:EG12094" - ], - [ - "gene_synonym", - "b0069" - ], - [ - "gene_synonym", - "yabN" - ] - ], - "dna_sequence": "ATGCCATCTGCTCGTCTGCAACAACAGTTCATCCGCCTGTGGCAATGCTGCGAGGGTAAATCGCAGGACACAACGCTCAACGAACTGGCAGCGTTATTGAGCTGCTCGCGTCGTCATATGCGCACCCTGCTCAACACCATGCAGGATCGCGGCTGGCTGACGTGGGAAGCGGAAGTCGGGCGCGGTAAACGCTCGCGTCTGACATTCCTCTATACCGGGCTGGCGCTTCAGCAACAGCGGGCGGAAGACCTGCTGGAGCAGGATCGTATCGATCAACTGGTGCAGTTGGTTGGCGACAAAGCGACTGTGCGGCAAATGCTGGTTTCTCATCTGGGCCGCAGCTTCCGCCAGGGGCGGCACATCCTGCGCGTGCTCTACTATCGTCCGTTGCGTAATCTGCTACCTGGCAGCGCATTGCGCCGTTCCGAAACCCATATCGCCCGGCAAATCTTCAGTTCGCTAACGCGCATAAATGAGGAAAATGGGGAACTGGAAGCAGACATCGCCCACCACTGGCAGCAAATTTCACCGCTTCACTGGCGTTTCTTTTTGCGTCCAGGAGTCCATTTTCACCATGGTCGTGAACTGGAAATGGACGATGTGATCGCCTCTTTAAAACGAATCAATACGCTGCCGCTCTATTCGCATATTGCTGACATTGTGTCGCCGACGCCCTGGACGCTGGATATCCATCTCACGCAACCGGACCGCTGGTTACCGTTACTGCTGGGGCAAGTTCCGGCGATGATCCTGCCGCGCGAATGGGAAACCCTCAGTAACTTTGCCAGCCATCCCATCGGCACCGGTCCGTATGCGGTGATTCGCAACAGCACCAATCAACTGAAAATTCAGGCATTCGATGACTTCTTCGGTTACCGGGCATTAATCGACGAAGTTAACGTCTGGGTTCTGCCGGAAATTGCCGACGAGCCAGCCGGAGGGCTGATGCTAAAAGGTCCACAGGGCGAGGAAAAAGAGATTGAAAGCCGCCTGGAGGAAGGTTGCTACTATTTACTGTTCGACAGCCGCACCCATCGCGGGGCGAATCAGCAAGTCAGGGACTGGGTAAGCTATGTGCTTTCTCCAACTAATCTGGTCTATTTCGCTGAGGAACAGTACCAGCAACTGTGGTTCCCGGCTTATGGACTGCTCCCCCGTTGGCACCATGCCCGCACCATAAAGAGCGAAAAACCGGCTGGCCTGGAAAGCCTCACCCTAACCTTTTATCAGGATCACAGTGAGCATCGGGTGATTGCCGGGATCATGCAGCAGATTCTGGCAAGTCACCAGGTCACGCTGAAAATCAAAGAGATCGACTACGATCAGTGGCATACAGGAGAGATCGAAAGTGATATCTGGCTAAACAGCGCCAACTTTACCCTGCCGCTGGACTTCTCTGTTTTCGCACATTTATGCGAAGTGCCACTGCTACAACATTGCATTCCCATTGACTGGCAAGCCGACGCTGCTCGCTGGCGCAATGGCGAGATGAATCTGGCGAACTGGTGCCAGCAACTGGTCGCCAGCAAAGCGATGGTGCCATTATTGCACCACTGGCTGATCATTCAGGGGCAACGCAGTATGCGCGGCCTGCGCATGAATACCCTCGGCTGGTTCGATTTTAAATCAGCGTGGTTTGCGCCACCGGATCCATGA", - "dna_sequence_length": 1656, - "functions": [ - "transcriptional DNA-binding transcriptional activator of sgrS sRNA" - ], - "id": "CDS_67", - "location": [ - [ - "NC_000913", - 77299, - "-", - 1656 - ] - ], - "md5": "916dfb60800b725a406afa8ca0c92af3", - "parent_gene": "", - "protein_md5": "f54eecbacd9b35ac4c76c6f09f1400c6", - "protein_translation": "MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIADIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRNSTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEGCYYLLFDSRTHRGANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLKIKEIDYDQWHTGEIESDIWLNSANFTLPLDFSVFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVASKAMVPLLHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP", - "protein_translation_length": 551, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14467" - ], - [ - "gene_synonym", - "GeneID:7751624" - ], - [ - "gene_synonym", - "sgrT" - ], - [ - "gene_synonym", - "ECK4477" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P5Z7" - ], - [ - "gene_synonym", - "b4662" - ], - [ - "gene_synonym", - "YP_002791237.1" - ], - [ - "gene_synonym", - "GI:226524697" - ] - ], - "dna_sequence": "ATGCGTCAGTTTTATCAGCACTATTTTACCGCGACAGCGAAGTTGTGCTGGTTGCGTTGGTTAAGCGTCCCACAACGATTAACCATGCTTGAAGGACTGATGCAGTGGGATGACCGCAATTCTGAAAGTTGA", - "dna_sequence_length": 132, - "functions": [ - "inhibitor of glucose uptake" - ], - "id": "CDS_68", - "location": [ - [ - "NC_000913", - 77388, - "+", - 132 - ] - ], - "md5": "4efeec2ec997f192a4eae52c64e47cdd", - "parent_gene": "", - "protein_md5": "abfa044baa298f169ea62ac6b48e1185", - "protein_translation": "MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES", - "protein_translation_length": 43, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_025293.1" - ], - [ - "gene_synonym", - "setA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31675" - ], - [ - "gene_synonym", - "GeneID:944793" - ], - [ - "gene_synonym", - "JW0069" - ], - [ - "gene_synonym", - "GI:49175994" - ], - [ - "gene_synonym", - "ASAP:ABE-0000257" - ], - [ - "gene_synonym", - "ECK0072" - ], - [ - "gene_synonym", - "b0070" - ], - [ - "gene_synonym", - "EcoGene:EG11754" - ], - [ - "gene_synonym", - "yabM" - ] - ], - "dna_sequence": "ATGATCTGGATAATGACGATGGCTCGCCGTATGAACGGTGTTTACGCGGCATTTATGCTGGTCGCTTTTATGATGGGGGTGGCCGGGGCGCTACAGGCTCCTACATTGAGCTTATTTCTGAGTCGTGAGGTTGGCGCGCAACCTTTCTGGATCGGCCTCTTTTATACGGTGAATGCTATTGCTGGGATCGGCGTAAGCCTCTGGTTGGCAAAACGTTCTGACAGTCAGGGCGATCGGCGAAAACTGATTATATTTTGCTGTTTGATGGCTATCGGCAATGCGCTATTGTTTGCATTTAATCGTCATTATCTGACGCTTATCACCTGTGGTGTGCTTCTGGCATCTCTGGCCAATACGGCAATGCCACAGTTATTTGCTCTGGCGCGGGAATATGCGGATAACTCGGCGCGAGAAGTGGTGATGTTTAGCTCGGTGATGCGTGCGCAGCTTTCTCTGGCATGGGTTATCGGTCCACCGTTGGCCTTTATGCTGGCGTTGAATTACGGCTTTACGGTGATGTTTTCGATTGCCGCCGGGATATTCACACTCAGTCTGGTATTGATTGCATTTATGCTTCCGTCTGTGGCGCGGGTAGAACTGCCGTCGGAAAATGCTTTATCAATGCAAGGTGGCTGGCAGGATAGTAACGTACGGATGTTATTTGTCGCCTCGACGTTAATGTGGACCTGCAACACCATGTACATTATTGATATGCCGTTGTGGATCAGTAGCGAGTTAGGATTGCCAGACAAACTGGCGGGTTTCCTGATGGGGACGGCAGCTGGACTGGAAATACCAGCAATGATTCTGGCTGGCTACTATGTCAAACGTTATGGTAAGCGGCGAATGATGGTCATAGCAGTGGCGGCAGGAGTACTGTTTTACACCGGATTGATTTTCTTTAATAGCCGTATGGCGTTGATGACGCTGCAACTTTTTAACGCTGTATTTATCGGCATTGTTGCGGGTATTGGGATGCTATGGTTTCAGGATTTAATGCCTGGAAGAGCGGGGGCAGCTACCACCTTATTTACTAACAGTATTTCTACCGGGGTAATTCTGGCTGGCGTTATTCAGGGAGCAATTGCACAAAGTTGGGGGCACTTTGCTGTCTACTGGGTAATTGCGGTTATTTCTGTTGTCGCATTATTTTTAACCGCAAAGGTTAAAGACGTTTGA", - "dna_sequence_length": 1179, - "functions": [ - "broad specificity sugar efflux system" - ], - "id": "CDS_69", - "location": [ - [ - "NC_000913", - 77621, - "+", - 1179 - ] - ], - "md5": "faf1a42a221a79cd77709418a13a3644", - "parent_gene": "", - "protein_md5": "1074d081a970e24900388928dd262a63", - "protein_translation": "MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREVGAQPFWIGLFYTVNAIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNALLFAFNRHYLTLITCGVLLASLANTAMPQLFALAREYADNSAREVVMFSSVMRAQLSLAWVIGPPLAFMLALNYGFTVMFSIAAGIFTLSLVLIAFMLPSVARVELPSENALSMQGGWQDSNVRMLFVASTLMWTCNTMYIIDMPLWISSELGLPDKLAGFLMGTAAGLEIPAMILAGYYVKRYGKRRMMVIAVAAGVLFYTGLIFFNSRMALMTLQLFNAVFIGIVAGIGMLWFQDLMPGRAGAATTLFTNSISTGVILAGVIQGAIAQSWGHFAVYWVIAVISVVALFLTAKVKDV", - "protein_translation_length": 392, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128065" - ], - [ - "gene_synonym", - "leuD" - ], - [ - "gene_synonym", - "EcoGene:EG11575" - ], - [ - "gene_synonym", - "GeneID:945642" - ], - [ - "gene_synonym", - "NP_414613.1" - ], - [ - "gene_synonym", - "b0071" - ], - [ - "gene_synonym", - "JW0070" - ], - [ - "gene_synonym", - "ASAP:ABE-0000259" - ], - [ - "gene_synonym", - "ECK0073" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30126" - ] - ], - "dna_sequence": "ATGGCAGAGAAATTTATCAAACACACAGGCCTGGTGGTTCCGCTGGATGCCGCCAATGTCGATACCGATGCAATCATCCCGAAACAGTTTTTGCAGAAAGTGACCCGTACGGGTTTTGGCGCGCATCTGTTTAACGACTGGCGTTTTCTGGATGAAAAAGGCCAACAGCCAAACCCGGACTTCGTGCTGAACTTCCCGCAGTATCAGGGCGCTTCCATTTTGCTGGCACGAGAAAACTTCGGCTGTGGCTCTTCGCGTGAGCACGCGCCCTGGGCATTGACCGACTACGGTTTTAAAGTGGTGATTGCGCCGAGTTTTGCTGACATCTTCTACGGCAATAGCTTTAACAACCAGCTGCTGCCGGTGAAATTAAGCGATGCAGAAGTGGACGAACTGTTTGCGCTGGTGAAAGCTAATCCGGGGATCCATTTCGACGTGGATCTGGAAGCGCAAGAGGTGAAAGCGGGAGAGAAAACCTATCGCTTTACCATCGATGCCTTCCGCCGCCACTGCATGATGAACGGTCTGGACAGTATTGGGCTTACCTTGCAGCACGACGACGCCATTGCCGCTTATGAAGCAAAACAACCTGCGTTTATGAATTAA", - "dna_sequence_length": 606, - "functions": [ - "3-isopropylmalate dehydratase small subunit" - ], - "id": "CDS_70", - "location": [ - [ - "NC_000913", - 79453, - "-", - 606 - ] - ], - "md5": "e5b60c7d4d83d924225880843c6e6bf1", - "parent_gene": "", - "protein_md5": "108aa625085bb3e3d8f6207045d4692e", - "protein_translation": "MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLFNDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVIAPSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTYRFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN", - "protein_translation_length": 201, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945076" - ], - [ - "gene_synonym", - "GI:16128066" - ], - [ - "gene_synonym", - "leuC" - ], - [ - "gene_synonym", - "NP_414614.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000261" - ], - [ - "gene_synonym", - "EcoGene:EG11576" - ], - [ - "gene_synonym", - "b0072" - ], - [ - "gene_synonym", - "ECK0074" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6A6" - ], - [ - "gene_synonym", - "JW0071" - ] - ], - "dna_sequence": "ATGGCTAAGACGTTATACGAAAAATTGTTCGACGCTCACGTTGTGTACGAAGCCGAAAACGAAACCCCACTGTTATATATCGACCGCCACCTGGTGCATGAAGTGACCTCACCGCAGGCGTTCGATGGTCTGCGCGCCCACGGTCGCCCGGTACGTCAGCCGGGCAAAACCTTCGCTACCATGGATCACAACGTCTCTACCCAGACCAAAGACATTAATGCCTGCGGTGAAATGGCGCGTATCCAGATGCAGGAACTGATCAAAAACTGCAAAGAATTTGGCGTCGAACTGTATGACCTGAATCACCCGTATCAGGGGATCGTCCACGTAATGGGGCCGGAACAGGGCGTCACCTTGCCGGGGATGACCATTGTCTGCGGCGACTCGCATACCGCCACCCACGGCGCGTTTGGCGCACTGGCCTTTGGTATCGGCACTTCCGAAGTTGAACACGTACTGGCAACGCAAACCCTGAAACAGGGCCGCGCAAAAACCATGAAAATTGAAGTCCAGGGCAAAGCCGCGCCGGGCATTACCGCAAAAGATATCGTGCTGGCAATTATCGGTAAAACCGGTAGCGCAGGCGGCACCGGGCATGTGGTGGAGTTTTGCGGCGAAGCAATCCGTGATTTAAGCATGGAAGGTCGTATGACCCTGTGCAATATGGCAATCGAAATGGGCGCAAAAGCCGGTCTGGTTGCACCGGACGAAACCACCTTTAACTATGTCAAAGGCCGTCTGCATGCGCCGAAAGGCAAAGATTTCGACGACGCCGTTGCCTACTGGAAAACCCTGCAAACCGACGAAGGCGCAACTTTCGATACCGTTGTCACTCTGCAAGCAGAAGAAATTTCACCGCAGGTCACCTGGGGCACCAATCCCGGCCAGGTGATTTCCGTGAACGACAATATTCCCGATCCGGCTTCGTTTGCCGATCCGGTTGAACGCGCGTCGGCAGAAAAAGCGCTGGCCTATATGGGGCTGAAACCGGGTATTCCGCTGACCGAAGTGGCTATCGACAAAGTGTTTATCGGTTCCTGTACCAACTCGCGCATTGAAGATTTACGCGCGGCAGCGGAGATCGCCAAAGGGCGAAAAGTCGCGCCAGGCGTGCAGGCACTGGTGGTTCCCGGCTCTGGCCCGGTAAAAGCCCAGGCGGAAGCGGAAGGTCTGGATAAAATCTTTATTGAAGCCGGTTTTGAATGGCGCTTGCCTGGCTGCTCAATGTGTCTGGCGATGAACAACGACCGTCTGAATCCGGGCGAACGTTGTGCCTCCACCAGCAACCGTAACTTTGAAGGCCGCCAGGGGCGCGGCGGGCGCACGCATCTGGTCAGCCCGGCAATGGCTGCCGCTGCTGCTGTGACCGGACATTTCGCCGACATTCGCAACATTAAATAA", - "dna_sequence_length": 1401, - "functions": [ - "3-isopropylmalate dehydratase large subunit" - ], - "id": "CDS_71", - "location": [ - [ - "NC_000913", - 80864, - "-", - 1401 - ] - ], - "md5": "e5f1f1270252c570cfa1f30129417482", - "parent_gene": "", - "protein_md5": "4d42f5f16566dbb9e6cade35cf385fe1", - "protein_translation": "MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGLRAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNHPYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQGRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMTLCNMAIEMGAKAGLVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTVVTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPLTEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGPVKAQAEAEGLDKIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMAAAAAVTGHFADIRNIK", - "protein_translation_length": 466, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944798" - ], - [ - "gene_synonym", - "JW5807" - ], - [ - "gene_synonym", - "leuB" - ], - [ - "gene_synonym", - "GI:90111082" - ], - [ - "gene_synonym", - "NP_414615.4" - ], - [ - "gene_synonym", - "EcoGene:EG11577" - ], - [ - "gene_synonym", - "ECK0075" - ], - [ - "gene_synonym", - "b0073" - ], - [ - "gene_synonym", - "ASAP:ABE-0000265" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30125" - ] - ], - "dna_sequence": "ATGTCGAAGAATTACCATATTGCCGTATTGCCGGGGGACGGTATTGGTCCGGAAGTGATGACCCAGGCGCTGAAAGTGCTGGATGCCGTGCGCAACCGCTTTGCGATGCGCATCACCACCAGCCATTACGATGTAGGCGGCGCAGCCATTGATAACCACGGGCAACCACTGCCGCCTGCGACGGTTGAAGGTTGTGAGCAAGCCGATGCCGTGCTGTTTGGCTCGGTAGGCGGCCCGAAGTGGGAACATTTACCACCAGACCAGCAACCAGAACGCGGCGCGCTGCTGCCTCTGCGTAAGCACTTCAAATTATTCAGCAACCTGCGCCCGGCAAAACTGTATCAGGGGCTGGAAGCATTCTGTCCGCTGCGTGCAGACATTGCCGCAAACGGCTTCGACATCCTGTGTGTGCGCGAACTGACCGGCGGCATCTATTTCGGTCAGCCAAAAGGCCGCGAAGGTAGCGGACAATATGAAAAAGCCTTTGATACCGAGGTGTATCACCGTTTTGAGATCGAACGTATCGCCCGCATCGCGTTTGAATCTGCTCGCAAGCGTCGCCACAAAGTGACGTCGATCGATAAAGCCAACGTGCTGCAATCCTCTATTTTATGGCGGGAGATCGTTAACGAGATCGCCACGGAATACCCGGATGTCGAACTGGCGCATATGTACATCGACAACGCCACCATGCAGCTGATTAAAGATCCATCACAGTTTGACGTTCTGCTGTGCTCCAACCTGTTTGGCGACATTCTGTCTGACGAGTGCGCAATGATCACTGGCTCGATGGGGATGTTGCCTTCCGCCAGCCTGAACGAGCAAGGTTTTGGACTGTATGAACCGGCGGGCGGCTCGGCACCAGATATCGCAGGCAAAAACATCGCCAACCCGATTGCACAAATCCTTTCGCTGGCACTGCTGCTGCGTTACAGCCTGGATGCCGATGATGCGGCTTGCGCCATTGAACGCGCCATTAACCGCGCATTAGAAGAAGGCATTCGCACCGGGGATTTAGCCCGTGGCGCTGCCGCCGTTAGTACCGATGAAATGGGCGATATCATTGCCCGCTATGTAGCAGAAGGGGTGTAA", - "dna_sequence_length": 1092, - "functions": [ - "3-isopropylmalate dehydrogenase, NAD(+)-dependent" - ], - "id": "CDS_72", - "location": [ - [ - "NC_000913", - 81958, - "-", - 1092 - ] - ], - "md5": "a645e5fadec1340f1bdc87c9c98f8d37", - "parent_gene": "", - "protein_md5": "9f236d51fdd36569883f4b5581d5ad7f", - "protein_translation": "MSKNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYDVGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEKAFDTEVYHRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPDVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAGGSAPDIAGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEGIRTGDLARGAAAVSTDEMGDIIARYVAEGV", - "protein_translation_length": 363, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11226" - ], - [ - "gene_synonym", - "leuA" - ], - [ - "gene_synonym", - "ASAP:ABE-0000267" - ], - [ - "gene_synonym", - "GI:16128068" - ], - [ - "gene_synonym", - "b0074" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09151" - ], - [ - "gene_synonym", - "ECK0076" - ], - [ - "gene_synonym", - "JW0073" - ], - [ - "gene_synonym", - "GeneID:947465" - ], - [ - "gene_synonym", - "NP_414616.1" - ] - ], - "dna_sequence": "ATGAGCCAGCAAGTCATTATTTTCGATACCACATTGCGCGACGGTGAACAGGCGTTACAGGCAAGCTTGAGTGTGAAAGAAAAACTGCAAATTGCGCTGGCCCTTGAGCGTATGGGTGTTGACGTGATGGAAGTCGGTTTCCCCGTCTCTTCGCCGGGCGATTTTGAATCGGTGCAAACCATCGCCCGCCAGGTTAAAAACAGCCGCGTATGTGCGTTAGCTCGCTGCGTGGAAAAAGATATCGACGTGGCGGCCGAATCCCTGAAAGTCGCCGAAGCCTTCCGTATTCATACCTTTATTGCCACTTCGCCAATGCACATCGCCACCAAGCTGCGCAGCACGCTGGACGAGGTGATCGAACGCGCTATCTATATGGTGAAACGCGCCCGTAATTACACCGATGATGTTGAATTTTCTTGCGAAGATGCCGGGCGTACACCCATTGCCGATCTGGCGCGAGTGGTCGAAGCGGCGATTAATGCCGGTGCCACCACCATCAACATTCCGGACACCGTGGGCTACACCATGCCGTTTGAGTTCGCCGGAATCATCAGCGGCCTGTATGAACGCGTGCCTAACATCGACAAAGCCATTATCTCCGTACATACCCACGACGATTTGGGCCTGGCGGTCGGAAACTCACTGGCGGCGGTACATGCCGGTGCACGCCAGGTGGAAGGCGCAATGAACGGGATCGGCGAGCGTGCCGGAAACTGTTCCCTGGAAGAAGTCATCATGGCGATCAAAGTTCGTAAGGATATTCTCAACGTCCACACCGCCATTAATCACCAGGAGATATGGCGCACCAGCCAGTTAGTTAGCCAGATTTGTAATATGCCGATCCCGGCAAACAAAGCCATTGTTGGCAGCGGCGCATTCGCACACTCCTCCGGTATACACCAGGATGGCGTGCTGAAAAACCGCGAAAACTACGAAATCATGACACCAGAATCTATTGGTCTGAACCAAATCCAGCTGAATCTGACCTCTCGTTCGGGGCGTGCGGCGGTGAAACATCGCATGGATGAGATGGGGTATAAAGAAAGTGAATATAATTTAGACAATTTGTACGATGCTTTCCTGAAGCTGGCGGACAAAAAAGGTCAGGTGTTTGATTACGATCTGGAGGCGCTGGCCTTCATCGGTAAGCAGCAAGAAGAGCCGGAGCATTTCCGTCTGGATTACTTCAGCGTGCAGTCTGGCTCTAACGATATCGCCACCGCCGCCGTCAAACTGGCCTGTGGCGAAGAAGTCAAAGCAGAAGCCGCCAACGGTAACGGTCCGGTCGATGCCGTCTATCAGGCAATTAACCGCATCACTGAATATAACGTCGAACTGGTGAAATACAGCCTGACCGCCAAAGGCCACGGTAAAGATGCGCTGGGTCAGGTGGATATCGTCGCTAACTACAACGGTCGCCGCTTCCACGGCGTCGGCCTGGCTACCGATATTGTCGAGTCATCTGCCAAAGCCATGGTGCACGTTCTGAACAATATCTGGCGTGCCGCAGAAGTCGAAAAAGAGTTGCAACGCAAAGCTCAACACAACGAAAACAACAAGGAAACCGTGTGA", - "dna_sequence_length": 1572, - "functions": [ - "2-isopropylmalate synthase" - ], - "id": "CDS_73", - "location": [ - [ - "NC_000913", - 83529, - "-", - 1572 - ] - ], - "md5": "88f203643a50cc1f9c4fb0e5a4d05392", - "parent_gene": "", - "protein_md5": "2e7ad6989e4f507866d7138706f23ec1", - "protein_translation": "MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVMEVGFPVSSPGDFESVQTIARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIATSPMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAINAGATTINIPDTVGYTMPFEFAGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAVHAGARQVEGAMNGIGERAGNCSLEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQICNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGRAAVKHRMDEMGYKESEYNLDNLYDAFLKLADKKGQVFDYDLEALAFIGKQQEEPEHFRLDYFSVQSGSNDIATAAVKLACGEEVKAEAANGNGPVDAVYQAINRITEYNVELVKYSLTAKGHGKDALGQVDIVANYNGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKELQRKAQHNENNKETV", - "protein_translation_length": 523, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000269" - ], - [ - "gene_synonym", - "leuL" - ], - [ - "gene_synonym", - "GI:16128069" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD79" - ], - [ - "gene_synonym", - "b0075" - ], - [ - "gene_synonym", - "JW0074" - ], - [ - "gene_synonym", - "ECK0077" - ], - [ - "gene_synonym", - "GeneID:946072" - ], - [ - "gene_synonym", - "EcoGene:EG11280" - ], - [ - "gene_synonym", - "NP_414617.1" - ], - [ - "gene_synonym", - "leuLP" - ] - ], - "dna_sequence": "ATGACTCACATCGTTCGCTTTATCGGTCTACTACTACTAAACGCATCTTCTTTGCGCGGTAGACGAGTGAGCGGCATCCAGCATTAA", - "dna_sequence_length": 87, - "functions": [ - "leu operon leader peptide" - ], - "id": "CDS_74", - "location": [ - [ - "NC_000913", - 83708, - "-", - 87 - ] - ], - "md5": "3822e3797a7f64366f83fb60c525c292", - "parent_gene": "", - "protein_md5": "b0d7e14348bbe9ca5277cc67cff46ff4", - "protein_translation": "MTHIVRFIGLLLLNASSLRGRRVSGIQH", - "protein_translation_length": 28, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414618.4" - ], - [ - "gene_synonym", - "GI:90111083" - ], - [ - "gene_synonym", - "leuO" - ], - [ - "gene_synonym", - "b0076" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10151" - ], - [ - "gene_synonym", - "ECK0078" - ], - [ - "gene_synonym", - "GeneID:949034" - ], - [ - "gene_synonym", - "EcoGene:EG10531" - ], - [ - "gene_synonym", - "ASAP:ABE-0000280" - ], - [ - "gene_synonym", - "JW0075" - ] - ], - "dna_sequence": "ATGCCAGAGGTACAAACAGATCATCCAGAGACGGCGGAGTTAAGCAAACCACAGCTACGCATGGTCGATCTCAACTTATTAACCGTTTTCGATGCCGTGATGCAGGAGCAAAACATTACTCGTGCCGCTCATGTTCTGGGAATGTCGCAACCTGCGGTCAGTAACGCTGTTGCACGCCTGAAGGTGATGTTTAATGACGAGCTTTTTGTTCGTTATGGCCGTGGTATTCAACCGACTGCTCGCGCATTTCAACTTTTTGGTTCAGTTCGTCAGGCATTGCAACTAGTACAAAATGAATTGCCTGGTTCAGGTTTTGAACCCGCGAGCAGTGAACGTGTATTTCATCTTTGTGTTTGCAGCCCGTTAGACAGCATTCTGACCTCGCAGATTTATAATCACATTGAGCAGATTGCGCCAAATATACATGTTATGTTCAAGTCTTCATTAAATCAGAACACTGAACATCAGCTGCGTTATCAGGAAACGGAGTTTGTGATTAGTTATGAAGACTTCCATCGTCCTGAATTTACCAGCGTACCATTATTTAAAGATGAAATGGTGCTGGTAGCCAGCAAAAATCATCCAACAATTAAGGGCCCGTTACTGAAACATGATGTTTATAACGAACAACATGCGGCGGTTTCGCTCGATCGTTTCGCGTCATTTAGTCAACCTTGGTATGACACGGTAGATAAGCAAGCCAGTATCGCGTATCAGGGCATGGCAATGATGAGCGTACTTAGCGTGGTGTCGCAAACGCATTTGGTCGCTATTGCGCCGCGTTGGCTGGCTGAAGAGTTCGCTGAATCCTTAGAATTACAGGTATTACCGCTGCCGTTAAAACAAAACAGCAGAACCTGTTATCTCTCCTGGCATGAAGCTGCCGGGCGCGATAAAGGCCATCAGTGGATGGAAGAGCAATTAGTCTCAATTTGCAAACGCTAA", - "dna_sequence_length": 945, - "functions": [ - "global transcription factor" - ], - "id": "CDS_75", - "location": [ - [ - "NC_000913", - 84368, - "+", - 945 - ] - ], - "md5": "3f253f62e1670d3c5d5d79ab40fc1507", - "parent_gene": "", - "protein_md5": "95f6400c1703e1dccdccad08feeada38", - "protein_translation": "MPEVQTDHPETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAAHVLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPGSGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDRFASFSQPWYDTVDKQASIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVLPLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR", - "protein_translation_length": 314, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000290" - ], - [ - "gene_synonym", - "GI:90111084" - ], - [ - "gene_synonym", - "EcoGene:EG10500" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00893" - ], - [ - "gene_synonym", - "YP_025294.2" - ], - [ - "gene_synonym", - "GeneID:948793" - ], - [ - "gene_synonym", - "b0077" - ], - [ - "gene_synonym", - "ilvI" - ], - [ - "gene_synonym", - "ECK0079" - ], - [ - "gene_synonym", - "JW0076" - ] - ], - "dna_sequence": "ATGGAGATGTTGTCTGGAGCCGAGATGGTCGTCCGATCGCTTATCGATCAGGGCGTTAAACAAGTATTCGGTTATCCCGGAGGCGCAGTCCTTGATATTTATGATGCATTGCATACCGTGGGTGGTATTGATCATGTATTAGTTCGTCATGAGCAGGCGGCGGTGCATATGGCCGATGGCCTGGCGCGCGCGACCGGGGAAGTCGGCGTCGTGCTGGTAACGTCGGGTCCAGGGGCGACCAATGCGATTACTGGCATCGCCACCGCTTATATGGATTCCATTCCATTAGTTGTCCTTTCCGGGCAGGTAGCGACCTCGTTGATAGGTTACGATGCCTTTCAGGAGTGCGACATGGTGGGGATTTCGCGACCGGTGGTTAAACACAGTTTTCTGGTTAAGCAAACGGAAGACATTCCGCAGGTGCTGAAAAAGGCTTTCTGGCTGGCGGCAAGTGGTCGCCCAGGACCAGTAGTCGTTGATTTACCGAAAGATATTCTTAATCCGGCGAACAAATTACCCTATGTCTGGCCGGAGTCGGTCAGTATGCGTTCTTACAATCCCACTACTACCGGACATAAAGGGCAAATTAAGCGTGCTCTGCAAACGCTGGTAGCGGCAAAAAAACCGGTTGTCTACGTAGGCGGTGGGGCAATCACGGCGGGCTGCCATCAGCAGTTGAAAGAAACGGTGGAGGCGTTGAATCTGCCCGTTGTTTGCTCATTGATGGGGCTGGGGGCGTTTCCGGCAACGCATCGTCAGGCACTGGGCATGCTGGGAATGCACGGTACCTACGAAGCCAATATGACGATGCATAACGCGGATGTGATTTTCGCCGTCGGGGTACGATTTGATGACCGAACGACGAACAATCTGGCAAAGTACTGCCCAAATGCCACTGTTCTGCATATCGATATTGATCCTACTTCCATTTCTAAAACCGTGACTGCGGATATCCCGATTGTGGGGGATGCTCGCCAGGTCCTCGAACAAATGCTTGAACTCTTGTCGCAAGAATCCGCCCATCAACCACTGGATGAGATCCGCGACTGGTGGCAGCAAATTGAACAGTGGCGCGCTCGTCAGTGCCTGAAATATGACACTCACAGTGAAAAGATTAAACCGCAGGCGGTGATCGAGACTCTTTGGCGGTTGACGAAGGGAGACGCTTACGTGACGTCCGATGTCGGGCAGCACCAGATGTTTGCTGCACTTTATTATCCATTCGACAAACCGCGTCGCTGGATCAATTCCGGTGGCCTCGGCACGATGGGTTTTGGTTTACCTGCGGCACTGGGCGTCAAAATGGCGTTGCCAGAAGAAACCGTGGTTTGCGTCACTGGCGACGGCAGTATTCAGATGAACATCCAGGAACTGTCTACCGCGTTGCAATACGAGTTGCCCGTACTGGTGGTGAATCTCAATAACCGCTATCTGGGGATGGTGAAGCAGTGGCAGGACATGATCTATTCCGGCCGTCATTCACAATCTTATATGCAATCGCTACCCGATTTCGTCCGTCTGGCGGAAGCCTATGGGCATGTCGGGATCCAGATTTCTCATCCGCATGAGCTGGAAAGCAAACTTAGCGAGGCGCTGGAACAGGTGCGCAATAATCGCCTGGTGTTTGTTGATGTTACCGTCGATGGCAGCGAGCACGTCTACCCGATGCAGATTCGCGGGGGCGGAATGGATGAAATGTGGTTAAGCAAAACGGAGAGAACCTGA", - "dna_sequence_length": 1725, - "functions": [ - "acetolactate synthase 3 large subunit" - ], - "id": "CDS_76", - "location": [ - [ - "NC_000913", - 85630, - "+", - 1725 - ] - ], - "md5": "caf0752a249703e7c5726b3c46e1a6dd", - "parent_gene": "", - "protein_md5": "5f12a997f27fae555456c91ae1fff791", - "protein_translation": "MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGIDHVLVRHEQAAVHMADGLARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVVLSGQVATSLIGYDAFQECDMVGISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVDLPKDILNPANKLPYVWPESVSMRSYNPTTTGHKGQIKRALQTLVAAKKPVVYVGGGAITAGCHQQLKETVEALNLPVVCSLMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVIFAVGVRFDDRTTNNLAKYCPNATVLHIDIDPTSISKTVTADIPIVGDARQVLEQMLELLSQESAHQPLDEIRDWWQQIEQWRARQCLKYDTHSEKIKPQAVIETLWRLTKGDAYVTSDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTGDGSIQMNIQELSTALQYELPVLVVNLNNRYLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLAEAYGHVGIQISHPHELESKLSEALEQVRNNRLVFVDVTVDGSEHVYPMQIRGGGMDEMWLSKTERT", - "protein_translation_length": 574, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "brnP" - ], - [ - "gene_synonym", - "GI:16128071" - ], - [ - "gene_synonym", - "GeneID:947267" - ], - [ - "gene_synonym", - "EcoGene:EG10499" - ], - [ - "gene_synonym", - "ECK0080" - ], - [ - "gene_synonym", - "ilvH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00894" - ], - [ - "gene_synonym", - "NP_414620.1" - ], - [ - "gene_synonym", - "JW0077" - ], - [ - "gene_synonym", - "b0078" - ], - [ - "gene_synonym", - "ASAP:ABE-0000294" - ] - ], - "dna_sequence": "ATGCGCCGGATATTATCAGTCTTACTCGAAAATGAATCAGGCGCGTTATCCCGCGTGATTGGCCTTTTTTCCCAGCGTGGCTACAACATTGAAAGCCTGACCGTTGCGCCAACCGACGATCCGACATTATCGCGTATGACCATCCAGACCGTGGGCGATGAAAAAGTACTTGAGCAGATCGAAAAGCAATTACACAAACTGGTCGATGTCTTGCGCGTGAGTGAGTTGGGGCAGGGCGCGCATGTTGAGCGGGAAATCATGCTGGTGAAAATTCAGGCCAGCGGTTACGGGCGTGACGAAGTGAAACGTAATACGGAAATATTCCGTGGGCAAATTATCGATGTCACACCCTCGCTTTATACCGTTCAATTAGCAGGCACCAGCGGTAAGCTTGATGCATTTTTAGCATCGATTCGCGATGTGGCGAAAATTGTGGAGGTTGCTCGCTCTGGTGTGGTCGGACTTTCGCGCGGCGATAAAATAATGCGTTGA", - "dna_sequence_length": 492, - "functions": [ - "acetolactate synthase 3, small subunit, valine-sensitive" - ], - "id": "CDS_77", - "location": [ - [ - "NC_000913", - 87357, - "+", - 492 - ] - ], - "md5": "c79226dce66d10882115fab670ebf312", - "parent_gene": "", - "protein_md5": "20c9b2c99325f00f97eca293da032b3f", - "protein_translation": "MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVKRNTEIFRGQIIDVTPSLYTVQLAGTSGKLDAFLASIRDVAKIVEVARSGVVGLSRGDKIMR", - "protein_translation_length": 163, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACP1" - ], - [ - "gene_synonym", - "EcoGene:EG10338" - ], - [ - "gene_synonym", - "GeneID:944804" - ], - [ - "gene_synonym", - "GI:16128073" - ], - [ - "gene_synonym", - "ASAP:ABE-0000299" - ], - [ - "gene_synonym", - "fruR" - ], - [ - "gene_synonym", - "NP_414622.1" - ], - [ - "gene_synonym", - "ECK0081" - ], - [ - "gene_synonym", - "JW0078" - ], - [ - "gene_synonym", - "cra" - ], - [ - "gene_synonym", - "fruC" - ], - [ - "gene_synonym", - "serR?" - ], - [ - "gene_synonym", - "shl" - ], - [ - "gene_synonym", - "fruS?" - ], - [ - "gene_synonym", - "b0080" - ] - ], - "dna_sequence": "GTGAAACTGGATGAAATCGCTCGGCTGGCGGGAGTGTCGCGGACCACTGCAAGCTATGTTATTAACGGCAAAGCGAAGCAATACCGTGTGAGCGACAAAACCGTTGAAAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTGCCTGCTCAGAAGATCAGCCAGACAACGAAATGCGGTGCATTGAGCACCTTTTACAGCGTCAGGTTGATGCCATTATTGTTTCGACGTCGTTGCCTCCTGAGCATCCTTTTTATCAACGCTGGGCTAACGACCCGTTCCCGATTGTCGCGCTGGACCGCGCCCTCGATCGTGAACACTTCACCAGCGTGGTTGGTGCCGATCAGGATGATGCCGAAATGCTGGCGGAAGAGTTACGTAAGTTTCCCGCCGAGACGGTGCTTTATCTTGGTGCGCTACCGGAGCTTTCTGTCAGCTTCCTGCGTGAACAAGGTTTCCGTACTGCCTGGAAAGATGATCCGCGCGAAGTGCATTTCCTGTATGCCAACAGCTATGAGCGGGAGGCGGCTGCCCAGTTATTCGAAAAATGGCTGGAAACGCATCCGATGCCGCAGGCGCTGTTCACAACGTCGTTTGCGTTGTTGCAAGGAGTGATGGATGTCACGCTGCGTCGCGACGGCAAACTGCCTTCTGACCTGGCAATTGCCACCTTTGGCGATAACGAACTGCTCGACTTCTTACAGTGTCCGGTGCTGGCAGTGGCTCAACGTCACCGCGATGTCGCAGAGCGTGTGCTGGAGATTGTCCTGGCAAGCCTGGACGAACCGCGTAAGCCAAAACCTGGTTTAACGCGCATTAAACGTAATCTCTATCGCCGCGGCGTGCTCAGCCGTAGCTAA", - "dna_sequence_length": 1005, - "functions": [ - "transcriptional repressor-activator for carbon metabolism" - ], - "id": "CDS_78", - "location": [ - [ - "NC_000913", - 88028, - "+", - 1005 - ] - ], - "md5": "8108b82ca23fc82d2bbff27ccabe465c", - "parent_gene": "", - "protein_md5": "b69733282dba9d9c66611dcc06e86583", - "protein_translation": "MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRALDREHFTSVVGADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYANSYEREAAAQLFEKWLETHPMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDNELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS", - "protein_translation_length": 334, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128074" - ], - [ - "gene_synonym", - "mraZ" - ], - [ - "gene_synonym", - "GeneID:944810" - ], - [ - "gene_synonym", - "yabB" - ], - [ - "gene_synonym", - "ASAP:ABE-0000302" - ], - [ - "gene_synonym", - "ECK0082" - ], - [ - "gene_synonym", - "JW0079" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P22186" - ], - [ - "gene_synonym", - "NP_414623.1" - ], - [ - "gene_synonym", - "b0081" - ], - [ - "gene_synonym", - "EcoGene:EG11084" - ] - ], - "dna_sequence": "ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCCGTTATCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTTATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCGAATGTCAGATGGATGGCGCAGGTCGATTGTTAATCGCGCCAGTACTGCGGCAACATGCCGGGCTGACAAAAGAAGTGATGCTGGTTGGACAGTTCAACAAGTTTGAGCTGTGGGATGAAACAACCTGGCATCAACAGGTCAAGGAAGATATCGACGCAGAGCAGTTGGCTACCGGAGACTTATCGGAGCGACTGCAGGACTTGTCTCTATAA", - "dna_sequence_length": 459, - "functions": [ - "RsmH methytransferase inhibitor" - ], - "id": "CDS_79", - "location": [ - [ - "NC_000913", - 89634, - "+", - 459 - ] - ], - "md5": "780344597af620c048cfdf9431b9c296", - "parent_gene": "", - "protein_md5": "caf26526566e5443399fb4a9b79e8df5", - "protein_translation": "MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIYHPCLLLYPLPEWEIIEQKLSRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHAGLTKEVMLVGQFNKFELWDETTWHQQVKEDIDAEQLATGDLSERLQDLSL", - "protein_translation_length": 152, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128075" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60390" - ], - [ - "gene_synonym", - "NP_414624.1" - ], - [ - "gene_synonym", - "ECK0083" - ], - [ - "gene_synonym", - "GeneID:944806" - ], - [ - "gene_synonym", - "mraW" - ], - [ - "gene_synonym", - "rsmH" - ], - [ - "gene_synonym", - "ASAP:ABE-0000304" - ], - [ - "gene_synonym", - "yabC" - ], - [ - "gene_synonym", - "JW0080" - ], - [ - "gene_synonym", - "b0082" - ], - [ - "gene_synonym", - "EcoGene:EG11085" - ] - ], - "dna_sequence": "ATGATGGAAAACTATAAACATACTACGGTGCTGCTGGATGAAGCCGTTAATGGCCTCAATATCCGTCCTGATGGCATCTACATTGATGGGACTTTTGGTCGCGGTGGTCACTCACGTCTGATCCTCTCGCAGCTTGGCGAAGAGGGGCGTTTGCTGGCGATCGATCGCGACCCGCAGGCTATCGCCGTTGCGAAGACTATTGATGATCCGCGCTTCTCCATCATCCACGGACCTTTCTCCGCGCTGGGCGAATACGTTGCCGAGCGCGATCTTATCGGCAAGATCGACGGCATTCTCCTCGATCTTGGCGTCTCTTCACCGCAACTTGATGATGCTGAACGTGGCTTTTCCTTTATGCGCGATGGTCCGCTGGACATGCGTATGGACCCAACCCGTGGGCAGTCAGCCGCTGAATGGCTACAAACCGCAGAAGAAGCCGATATCGCCTGGGTATTGAAAACCTATGGTGAAGAGCGTTTTGCCAAACGCATTGCCCGCGCCATTGTCGAGCGTAACCGCGAACAGCCGATGACCCGCACCAAAGAACTGGCGGAAGTCGTGGCTGCTGCAACGCCGGTGAAAGATAAGTTTAAACATCCCGCGACCCGTACCTTCCAGGCGGTGCGCATTTGGGTAAACAGTGAACTGGAGGAGATAGAGCAGGCGCTAAAAAGCTCGCTCAACGTGCTGGCCCCGGGTGGGCGGCTTTCGATCATCAGCTTCCACTCGCTGGAAGACCGTATTGTGAAACGTTTTATGCGTGAAAACAGCCGCGGTCCGCAAGTTCCGGCAGGGTTACCGATGACTGAAGAGCAGCTCAAAAAACTGGGTGGCCGTCAGCTGCGAGCACTAGGCAAGTTAATGCCGGGCGAAGAAGAGGTGGCTGAGAACCCTCGTGCCCGTAGTTCAGTTCTGCGTATTGCAGAGAGGACGAATGCATGA", - "dna_sequence_length": 942, - "functions": [ - "16S rRNA m(4)C1402 methyltransferase, SAM-dependent" - ], - "id": "CDS_80", - "location": [ - [ - "NC_000913", - 90094, - "+", - 942 - ] - ], - "md5": "4bb729530d8b915b14280fd6c9e060da", - "parent_gene": "", - "protein_md5": "60e578c177a169cec19325fad173e260", - "protein_translation": "MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKLGGRQLRALGKLMPGEEEVAENPRARSSVLRIAERTNA", - "protein_translation_length": 313, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414625.1" - ], - [ - "gene_synonym", - "GI:16128076" - ], - [ - "gene_synonym", - "GeneID:944803" - ], - [ - "gene_synonym", - "ASAP:ABE-0000306" - ], - [ - "gene_synonym", - "ftsL" - ], - [ - "gene_synonym", - "mraR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEN4" - ], - [ - "gene_synonym", - "ECK0084" - ], - [ - "gene_synonym", - "JW0081" - ], - [ - "gene_synonym", - "yabD" - ], - [ - "gene_synonym", - "b0083" - ], - [ - "gene_synonym", - "EcoGene:EG11086" - ] - ], - "dna_sequence": "ATGATCAGCAGAGTGACAGAAGCTCTAAGCAAAGTTAAAGGATCGATGGGAAGCCACGAGCGCCATGCATTGCCTGGTGTTATCGGTGACGATCTTTTGCGATTTGGGAAGCTGCCACTCTGCCTGTTCATTTGCATTATTTTGACGGCGGTGACTGTGGTAACCACGGCGCACCATACCCGTTTACTGACCGCTCAGCGCGAACAACTGGTGCTGGAGCGAGATGCTTTAGACATTGAATGGCGCAACCTGATCCTTGAAGAGAATGCGCTCGGCGACCATAGCCGGGTGGAAAGGATCGCCACGGAAAAGCTGCAAATGCAGCATGTTGATCCGTCACAAGAAAATATCGTAGTGCAAAAATAA", - "dna_sequence_length": 366, - "functions": [ - "membrane bound cell division leucine zipper septum protein" - ], - "id": "CDS_81", - "location": [ - [ - "NC_000913", - 91032, - "+", - 366 - ] - ], - "md5": "55122f2f83c86cb0e2d4b6c19a2d89c2", - "parent_gene": "", - "protein_md5": "049383c87ab3f6e97f9a4884f97c116f", - "protein_translation": "MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFICIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIATEKLQMQHVDPSQENIVVQK", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944799" - ], - [ - "gene_synonym", - "GI:16128077" - ], - [ - "gene_synonym", - "ASAP:ABE-0000309" - ], - [ - "gene_synonym", - "sep" - ], - [ - "gene_synonym", - "ftsI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD68" - ], - [ - "gene_synonym", - "pbpB" - ], - [ - "gene_synonym", - "ECK0085" - ], - [ - "gene_synonym", - "NP_414626.1" - ], - [ - "gene_synonym", - "b0084" - ], - [ - "gene_synonym", - "EcoGene:EG10341" - ], - [ - "gene_synonym", - "JW0082" - ] - ], - "dna_sequence": "ATGAAAGCAGCGGCGAAAACGCAGAAACCAAAACGTCAGGAAGAACATGCCAACTTTATCAGTTGGCGTTTTGCGTTGTTATGCGGCTGTATTCTCCTGGCGCTGGCTTTTCTGCTCGGACGCGTAGCGTGGTTACAAGTTATCTCCCCGGATATGCTGGTGAAAGAGGGCGACATGCGTTCTCTTCGCGTTCAGCAAGTTTCCACCTCCCGCGGCATGATTACTGACCGTTCTGGTCGCCCGTTAGCGGTGAGCGTGCCGGTAAAAGCGATTTGGGCTGACCCGAAAGAAGTGCATGACGCTGGCGGTATCAGCGTCGGTGACCGCTGGAAGGCGCTGGCTAACGCGCTCAATATTCCGCTGGATCAGCTTTCAGCCCGCATTAACGCCAACCCGAAAGGGCGCTTTATTTATCTGGCGCGTCAGGTGAACCCTGACATGGCGGACTACATCAAAAAACTGAAACTGCCGGGGATTCATCTGCGTGAAGAGTCTCGCCGTTACTATCCGTCCGGCGAAGTGACTGCTCACCTCATCGGCTTTACTAACGTCGATAGTCAAGGGATTGAGGGCGTTGAGAAGAGTTTCGATAAATGGCTTACCGGGCAGCCGGGTGAGCGCATTGTGCGTAAAGACCGCTATGGTCGCGTAATTGAAGATATTTCTTCTACTGACAGCCAGGCAGCGCACAACCTGGCGCTGAGTATTGATGAACGCCTGCAGGCGCTGGTTTATCGCGAACTGAACAACGCGGTGGCCTTTAACAAGGCTGAATCTGGTAGCGCCGTGCTGGTGGATGTCAACACCGGTGAAGTGCTGGCGATGGCTAACAGCCCGTCATACAACCCTAACAATCTGAGCGGCACGCCGAAAGAGGCGATGCGTAACCGTACCATCACCGACGTGTTTGAACCGGGCTCAACGGTTAAACCGATGGTGGTAATGACCGCGTTGCAACGTGGCGTGGTGCGGGAAAACTCGGTACTCAATACCATTCCTTATCGAATTAACGGCCACGAAATCAAAGACGTGGCACGCTACAGCGAATTAACCCTGACCGGGGTATTACAGAAGTCGAGTAACGTCGGTGTTTCCAAGCTGGCGTTAGCGATGCCGTCCTCAGCGTTAGTAGATACTTACTCACGTTTTGGACTGGGAAAAGCGACCAATTTGGGGTTGGTCGGAGAACGCAGTGGCTTATATCCTCAAAAACAACGGTGGTCTGACATAGAGAGGGCCACCTTCTCTTTCGGCTACGGGCTAATGGTAACACCATTACAGTTAGCGCGAGTCTACGCAACTATCGGCAGCTACGGCATTTATCGCCCACTGTCGATTACCAAAGTTGACCCCCCGGTTCCCGGTGAACGTGTCTTCCCGGAATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTAAAACCGGTACCGCGAAAAAGGTCGGGCCGGACGGTCGCTACATCAATAAATATATTGCTTATACCGCAGGCGTTGCGCCTGCGAGTCAGCCGCGCTTCGCGCTGGTTGTTGTTATCAACGATCCGCAGGCGGGTAAATACTACGGCGGCGCCGTTTCCGCGCCGGTCTTTGGTGCCATCATGGGCGGCGTATTGCGTACCATGAACATCGAGCCGGATGCGCTGACAACGGGCGATAAAAATGAATTTGTGATTAATCAAGGCGAGGGGACAGGTGGCAGATCGTAA", - "dna_sequence_length": 1767, - "functions": [ - "transpeptidase involved in septal peptidoglycan synthesis", - "penicillin-binding protein 3" - ], - "id": "CDS_82", - "location": [ - [ - "NC_000913", - 91413, - "+", - 1767 - ] - ], - "md5": "055df5f07200c59934559055a22fd18c", - "parent_gene": "", - "protein_md5": "ca864650b3b215c619e7ca7958675e39", - "protein_translation": "MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAWLQVISPDMLVKEGDMRSLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAGGISVGDRWKALANALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIHLREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPYRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPDALTTGDKNEFVINQGEGTGGRS", - "protein_translation_length": 588, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944791" - ], - [ - "gene_synonym", - "GI:16128078" - ], - [ - "gene_synonym", - "murE" - ], - [ - "gene_synonym", - "ASAP:ABE-0000311" - ], - [ - "gene_synonym", - "NP_414627.1" - ], - [ - "gene_synonym", - "JW0083" - ], - [ - "gene_synonym", - "EcoGene:EG10621" - ], - [ - "gene_synonym", - "ECK0086" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P22188" - ], - [ - "gene_synonym", - "b0085" - ] - ], - "dna_sequence": "GTGGCAGATCGTAATTTGCGCGACCTTCTTGCTCCGTGGGTGCCAGACGCACCTTCGCGAGCACTGCGAGAGATGACACTCGACAGCCGTGTGGCTGCGGCGGGCGATCTCTTTGTAGCTGTAGTAGGTCATCAGGCGGACGGGCGTCGATATATCCCGCAGGCGATAGCGCAAGGTGTGGCTGCCATTATTGCAGAGGCGAAAGATGAGGCGACCGATGGTGAAATCCGTGAAATGCACGGCGTACCGGTCATCTATCTCAGCCAGCTCAACGAGCGTTTATCTGCACTGGCGGGCCGCTTTTACCATGAACCCTCTGACAATTTACGTCTCGTGGGCGTAACGGGCACCAACGGCAAAACCACGACTACCCAGCTGTTGGCGCAGTGGAGCCAACTGCTTGGCGAAATCAGCGCGGTAATGGGCACCGTTGGTAACGGCCTGCTGGGGAAAGTGATCCCGACAGAAAATACAACCGGTTCGGCAGTCGATGTTCAGCATGAGCTGGCGGGGCTGGTGGATCAGGGCGCGACGTTTTGCGCAATGGAAGTTTCCTCCCACGGGCTGGTACAGCACCGTGTGGCGGCATTGAAATTTGCGGCGTCGGTCTTTACCAACTTAAGCCGCGATCACCTTGATTATCATGGTGATATGGAACACTACGAAGCCGCGAAATGGCTGCTTTATTCTGAGCATCATTGCGGTCAGGCGATTATTAACGCCGACGATGAAGTGGGCCGCCGCTGGCTGGCAAAACTGCCGGACGCGGTTGCGGTATCAATGGAAGATCATATTAATCCGAACTGTCACGGACGCTGGTTGAAAGCGACCGAAGTGAACTATCACGACAGCGGTGCGACGATTCGCTTTAGCTCAAGTTGGGGCGATGGCGAAATTGAAAGCCATCTGATGGGCGCTTTTAACGTCAGCAACCTGCTGCTCGCGCTGGCGACACTGTTGGCACTCGGCTATCCACTGGCTGATCTGCTGAAAACCGCCGCGCGTCTGCAACCGGTTTGCGGACGTATGGAAGTGTTCACTGCGCCAGGCAAACCGACGGTGGTGGTGGATTACGCGCATACGCCGGATGCACTGGAAAAAGCCTTACAGGCGGCGCGTCTGCACTGTGCGGGCAAGCTGTGGTGTGTCTTTGGCTGTGGTGGCGATCGCGATAAAGGTAAGCGTCCACTGATGGGCGCAATTGCCGAAGAGTTTGCTGACGTGGCGGTGGTGACGGACGATAACCCGCGTACCGAAGAACCGCGTGCCATCATCAACGATATTCTGGCGGGAATGTTAGATGCCGGACATGCCAAAGTGATGGAAGGCCGTGCTGAAGCGGTGACTTGCGCCGTTATGCAGGCTAAAGAGAATGATGTGGTACTGGTCGCGGGCAAAGGCCATGAAGATTACCAGATTGTTGGCAATCAGCGTCTGGACTACTCCGATCGCGTCACGGTGGCGCGTCTGCTGGGGGTGATTGCATGA", - "dna_sequence_length": 1488, - "functions": [ - "UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso- diaminopimelate ligase" - ], - "id": "CDS_83", - "location": [ - [ - "NC_000913", - 93166, - "+", - 1488 - ] - ], - "md5": "8da8651a23fe898974b2e2f6727b4b8e", - "parent_gene": "", - "protein_md5": "e83511defef507348e5a9d02ae774102", - "protein_translation": "MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGHQADGRRYIPQAIAQGVAAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFYHEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGEISAVMGTVGNGLLGKVIPTENTTGSAVDVQHELAGLVDQGATFCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDMEHYEAAKWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKATEVNYHDSGATIRFSSSWGDGEIESHLMGAFNVSNLLLALATLLALGYPLADLLKTAARLQPVCGRMEVFTAPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDKGKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTCAVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSDRVTVARLLGVIA", - "protein_translation_length": 495, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944813" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11880" - ], - [ - "gene_synonym", - "GI:16128079" - ], - [ - "gene_synonym", - "murF" - ], - [ - "gene_synonym", - "ASAP:ABE-0000313" - ], - [ - "gene_synonym", - "NP_414628.1" - ], - [ - "gene_synonym", - "JW0084" - ], - [ - "gene_synonym", - "EcoGene:EG10622" - ], - [ - "gene_synonym", - "ECK0087" - ], - [ - "gene_synonym", - "b0086" - ], - [ - "gene_synonym", - "mra" - ] - ], - "dna_sequence": "ATGATTAGCGTAACCCTTAGCCAACTTACCGACATTCTCAACGGTGAACTGCAAGGTGCAGATATCACCCTTGATGCTGTAACCACTGATACCCGAAAACTGACGCCGGGCTGCCTGTTTGTTGCCCTGAAAGGCGAACGTTTTGATGCCCACGATTTTGCCGACCAGGCGAAAGCTGGCGGCGCAGGCGCACTACTGGTTAGCCGTCCGCTGGACATCGACCTGCCGCAGTTAATCGTCAAGGATACGCGTCTGGCGTTTGGTGAACTGGCTGCATGGGTTCGCCAGCAAGTTCCGGCGCGCGTGGTTGCTCTGACGGGGTCCTCCGGCAAAACCTCCGTTAAAGAGATGACGGCGGCGATTTTAAGCCAGTGCGGCAACACGCTTTATACGGCAGGCAATCTCAACAACGACATCGGTGTACCGATGACGCTGTTGCGCTTAACGCCGGAATACGATTACGCAGTTATTGAACTTGGCGCGAACCATCAGGGCGAAATAGCCTGGACTGTGAGTCTGACTCGCCCGGAAGCTGCGCTGGTCAACAACCTGGCAGCGGCGCATCTGGAAGGTTTTGGCTCGCTTGCGGGTGTCGCGAAAGCGAAAGGTGAAATCTTTAGCGGCCTGCCGGAAAACGGTATCGCCATTATGAACGCCGACAACAACGACTGGCTGAACTGGCAGAGCGTAATTGGCTCACGCAAAGTGTGGCGTTTCTCACCCAATGCCGCCAACAGCGATTTCACCGCCACCAATATCCATGTGACCTCGCACGGTACGGAATTTACCCTACAAACCCCAACCGGTAGCGTCGATGTTCTGCTGCCGTTGCCGGGGCGTCACAATATTGCGAATGCGCTGGCAGCCGCTGCGCTCTCCATGTCCGTGGGCGCAACGCTTGATGCTATCAAAGCGGGGCTGGCAAATCTGAAAGCTGTTCCAGGCCGTCTGTTCCCCATCCAACTGGCAGAAAACCAGTTGCTGCTCGACGACTCCTACAACGCCAATGTCGGTTCAATGACTGCAGCAGTCCAGGTACTGGCTGAAATGCCGGGCTACCGCGTGCTGGTGGTGGGCGATATGGCGGAACTGGGCGCTGAAAGCGAAGCCTGCCATGTACAGGTGGGCGAGGCGGCAAAAGCTGCTGGTATTGACCGCGTGTTAAGCGTGGGTAAACAAAGCCATGCTATCAGCACCGCCAGCGGCGTTGGCGAACATTTTGCTGATAAAACTGCGTTAATTACGCGTCTTAAATTACTGATTGCTGAGCAACAGGTAATTACGATTTTAGTTAAGGGTTCACGTAGTGCCGCCATGGAAGAGGTAGTACGCGCTTTACAGGAGAATGGGACATGTTAG", - "dna_sequence_length": 1359, - "functions": [ - "UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase" - ], - "id": "CDS_84", - "location": [ - [ - "NC_000913", - 94650, - "+", - 1359 - ] - ], - "md5": "1c43127648e1cadb5b68660780828f1b", - "parent_gene": "", - "protein_md5": "5396f3a33a06a69f91053c7c025f1ff8", - "protein_translation": "MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALKGERFDAHDFADQAKAGGAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELGANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMNADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLPLPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYNANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGKQSHAISTASGVGEHFADKTALITRLKLLIAEQQVITILVKGSRSAAMEEVVRALQENGTC", - "protein_translation_length": 452, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10604" - ], - [ - "gene_synonym", - "GeneID:944814" - ], - [ - "gene_synonym", - "mraY" - ], - [ - "gene_synonym", - "ASAP:ABE-0000316" - ], - [ - "gene_synonym", - "murX" - ], - [ - "gene_synonym", - "ECK0088" - ], - [ - "gene_synonym", - "JW0085" - ], - [ - "gene_synonym", - "GI:16128080" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6W3" - ], - [ - "gene_synonym", - "b0087" - ], - [ - "gene_synonym", - "NP_414629.1" - ] - ], - "dna_sequence": "ATGTTAGTTTGGCTGGCCGAACATTTGGTCAAATATTATTCCGGCTTTAACGTCTTTTCCTATCTGACGTTTCGCGCCATCGTCAGCCTGCTGACCGCGCTGTTCATCTCATTGTGGATGGGCCCGCGTATGATTGCTCATTTGCAAAAACTTTCCTTTGGTCAGGTGGTGCGTAACGACGGTCCTGAATCACACTTCAGCAAGCGCGGTACGCCGACCATGGGCGGGATTATGATCCTGACGGCGATTGTGATCTCCGTACTGCTGTGGGCTTACCCGTCCAATCCGTACGTCTGGTGCGTGTTGGTGGTGCTGGTAGGTTACGGTGTTATTGGCTTTGTTGATGATTATCGCAAAGTGGTGCGTAAAGACACCAAAGGGTTGATCGCTCGTTGGAAGTATTTCTGGATGTCGGTCATTGCGCTGGGTGTCGCCTTCGCCCTGTACCTTGCCGGCAAAGACACGCCCGCAACGCAGCTGGTGGTCCCATTCTTTAAAGATGTGATGCCGCAGCTGGGGCTGTTCTACATTCTGCTGGCTTACTTCGTCATTGTGGGTACTGGCAACGCGGTAAACCTGACCGATGGTCTCGACGGCCTGGCAATTATGCCGACCGTATTTGTCGCCGGTGGTTTTGCGCTGGTGGCGTGGGCGACCGGCAATATGAACTTTGCCAGCTACTTGCATATACCGTATCTGCGACACGCCGGGGAACTGGTTATTGTCTGTACCGCGATAGTCGGGGCAGGACTGGGCTTCCTGTGGTTTAACACCTATCCGGCGCAGGTCTTTATGGGCGATGTAGGTTCGCTGGCGTTAGGTGGTGCGTTAGGCATTATCGCCGTACTGCTACGTCAGGAATTCCTGCTGGTGATTATGGGGGGCGTGTTCGTGGTAGAAACGCTTTCTGTCATCCTGCAGGTCGGCTCCTTTAAACTGCGCGGACAACGTATTTTCCGCATGGCACCGATTCATCACCACTATGAACTGAAAGGCTGGCCGGAACCGCGCGTCATTGTGCGTTTCTGGATTATTTCGCTGATGCTGGTTCTGATTGGTCTGGCAACGCTGAAGGTACGTTAA", - "dna_sequence_length": 1083, - "functions": [ - "phospho-N-acetylmuramoyl-pentapeptide transferase" - ], - "id": "CDS_85", - "location": [ - [ - "NC_000913", - 96002, - "+", - 1083 - ] - ], - "md5": "69db3e7a6a35f2329f0732b6f37ebfcf", - "parent_gene": "", - "protein_md5": "9fc6a2249ccf26d2a5dd645ebb3f5e85", - "protein_translation": "MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRMIAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVLVVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQLVVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWATGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISLMLVLIGLATLKVR", - "protein_translation_length": 360, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P14900" - ], - [ - "gene_synonym", - "ASAP:ABE-0000318" - ], - [ - "gene_synonym", - "EcoGene:EG10620" - ], - [ - "gene_synonym", - "b0088" - ], - [ - "gene_synonym", - "murD" - ], - [ - "gene_synonym", - "GeneID:944818" - ], - [ - "gene_synonym", - "JW0086" - ], - [ - "gene_synonym", - "GI:16128081" - ], - [ - "gene_synonym", - "NP_414630.1" - ], - [ - "gene_synonym", - "ECK0089" - ] - ], - "dna_sequence": "ATGGCTGATTATCAGGGTAAAAATGTCGTCATTATCGGCCTGGGCCTCACCGGGCTTTCCTGCGTGGACTTTTTCCTCGCTCGCGGTGTGACGCCGCGCGTTATGGATACGCGTATGACACCGCCTGGCCTGGATAAATTACCCGAAGCCGTAGAACGCCACACGGGCAGTCTGAATGATGAATGGCTGATGGCGGCAGATCTGATTGTCGCCAGTCCCGGTATTGCACTGGCGCATCCATCCTTAAGCGCTGCCGCTGATGCCGGAATCGAAATCGTTGGCGATATCGAGCTGTTCTGTCGCGAAGCACAAGCACCGATTGTGGCGATTACCGGTTCTAACGGCAAAAGCACGGTCACCACGCTAGTGGGTGAAATGGCGAAAGCGGCGGGGGTTAACGTTGGTGTGGGTGGCAATATTGGCCTGCCTGCGTTGATGCTACTGGATGATGAGTGTGAACTGTACGTGCTGGAACTGTCGAGCTTCCAGCTGGAAACCACCTCCAGCTTACAGGCGGTAGCAGCGACCATTCTGAACGTGACTGAAGATCATATGGATCGCTATCCGTTTGGTTTACAACAGTATCGTGCAGCAAAACTGCGCATTTACGAAAACGCGAAAGTTTGCGTGGTTAATGCTGATGATGCCTTAACAATGCCGATTCGCGGTGCGGATGAACGCTGCGTCAGCTTTGGCGTCAACATGGGTGACTATCACCTGAATCATCAGCAGGGCGAAACCTGGCTGCGGGTTAAAGGCGAGAAAGTGCTGAATGTGAAAGAGATGAAACTTTCCGGGCAGCATAACTACACCAATGCGCTGGCGGCGCTGGCGCTGGCAGATGCTGCAGGGTTACCGCGTGCCAGCAGCCTGAAAGCGTTAACCACATTCACTGGTCTGCCGCATCGCTTTGAAGTTGTGCTGGAGCATAACGGCGTACGTTGGATTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACGTAGACGGCACACTGCATTTGTTGCTGGGTGGCGATGGTAAATCGGCGGACTTTAGCCCACTGGCGCGTTACCTGAATGGCGATAACGTACGTCTGTATTGTTTCGGTCGTGACGGCGCGCAGCTGGCGGCGCTACGCCCGGAAGTGGCAGAACAAACCGAAACTATGGAACAGGCGATGCGCTTGCTGGCTCCGCGTGTTCAGCCGGGCGATATGGTTCTGCTCTCCCCAGCCTGTGCCAGCCTTGATCAGTTCAAGAACTTTGAACAACGAGGCAATGAGTTTGCCCGTCTGGCGAAGGAGTTAGGTTGA", - "dna_sequence_length": 1317, - "functions": [ - "UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase" - ], - "id": "CDS_86", - "location": [ - [ - "NC_000913", - 97087, - "+", - 1317 - ] - ], - "md5": "5eaa0bb6d7e1eac9d956ee6753b922f0", - "parent_gene": "", - "protein_md5": "8854d7953ec4e73de0c110b3373df75d", - "protein_translation": "MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG", - "protein_translation_length": 438, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0087" - ], - [ - "gene_synonym", - "GeneID:946322" - ], - [ - "gene_synonym", - "NP_414631.1" - ], - [ - "gene_synonym", - "ftsW" - ], - [ - "gene_synonym", - "ECK0090" - ], - [ - "gene_synonym", - "ASAP:ABE-0000320" - ], - [ - "gene_synonym", - "b0089" - ], - [ - "gene_synonym", - "GI:16128082" - ], - [ - "gene_synonym", - "EcoGene:EG10344" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABG4" - ] - ], - "dna_sequence": "ATGCGTTTATCTCTCCCTCGCCTGAAAATGCCGCGCCTGCCAGGATTCAGTATCCTGGTCTGGATCTCCACGGCGCTAAAGGGCTGGGTGATGGGCTCGCGGGAAAAAGATACCGACAGCCTGATCATGTACGATCGCACCTTACTGTGGCTGACCTTCGGCCTCGCGGCGATTGGCTTTATCATGGTGACCTCGGCGTCAATGCCCATAGGGCAACGCTTAACCAACGATCCGTTCTTCTTCGCGAAGCGTGATGGTGTCTATCTGATTTTGGCGTTTATTCTGGCGATCATTACGCTGCGTCTGCCGATGGAGTTCTGGCAACGCTACAGTGCCACGATGCTGCTCGGATCTATCATCCTGCTGATGATCGTCCTGGTAGTGGGTAGCTCGGTTAAAGGGGCATCGCGTTGGATCGATCTCGGTTTGCTGCGTATCCAGCCTGCGGAGCTGACAAAACTGTCGCTGTTTTGCTATATCGCCAACTATCTGGTGCGTAAAGGCGACGAAGTACGTAATAACCTGCGCGGCTTCCTGAAACCGATGGGCGTGATTCTGGTGTTGGCAGTGTTACTGCTGGCACAGCCAGACCTTGGTACGGTGGTGGTGTTGTTTGTGACTACGCTGGCGATGTTGTTCCTGGCGGGAGCGAAATTGTGGCAGTTCATTGCCATTATCGGTATGGGCATTTCAGCGGTTGTGTTGCTGATACTCGCCGAACCGTACCGTATCCGCCGTGTTACCGCATTCTGGAACCCGTGGGAAGATCCCTTTGGCAGCGGCTATCAGTTAACGCAATCGCTGATGGCGTTTGGTCGCGGCGAACTTTGGGGGCAAGGTTTAGGTAACTCGGTACAAAAACTGGAGTATCTGCCGGAAGCGCACACTGACTTTATTTTCGCCATTATCGGCGAAGAACTGGGGTATGTCGGTGTGGTGCTGGCACTTTTAATGGTATTCTTCGTCGCTTTTCGCGCGATGTCGATTGGCCGTAAAGCATTAGAAATTGACCACCGTTTTTCCGGTTTTCTCGCCTGTTCTATTGGCATCTGGTTTAGCTTCCAGGCGCTGGTTAACGTAGGCGCGGCGGCGGGGATGTTACCGACCAAAGGTCTGACATTGCCGCTGATCAGTTACGGTGGTTCGAGCTTACTGATTATGTCGACAGCCATCATGATGCTGTTGCGTATTGATTATGAAACGCGTCTGGAGAAAGCGCAGGCGTTTGTACGAGGTTCACGATGA", - "dna_sequence_length": 1245, - "functions": [ - "putative lipid II flippase", - "integral membrane protein", - "FtsZ ring stabilizer" - ], - "id": "CDS_87", - "location": [ - [ - "NC_000913", - 98403, - "+", - 1245 - ] - ], - "md5": "13b4aec72819979696354c126e6c976e", - "parent_gene": "", - "protein_md5": "80169ac40b04644e64f19b23f346f32f", - "protein_translation": "MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMYDRTLLWLTFGLAAIGFIMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRLPMEFWQRYSATMLLGSIILLMIVLVVGSSVKGASRWIDLGLLRIQPAELTKLSLFCYIANYLVRKGDEVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVLFVTTLAMLFLAGAKLWQFIAIIGMGISAVVLLILAEPYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGELWGQGLGNSVQKLEYLPEAHTDFIFAIIGEELGYVGVVLALLMVFFVAFRAMSIGRKALEIDHRFSGFLACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIMMLLRIDYETRLEKAQAFVRGSR", - "protein_translation_length": 414, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414632.1" - ], - [ - "gene_synonym", - "GeneID:946321" - ], - [ - "gene_synonym", - "EcoGene:EG10623" - ], - [ - "gene_synonym", - "murG" - ], - [ - "gene_synonym", - "ECK0091" - ], - [ - "gene_synonym", - "GI:16128083" - ], - [ - "gene_synonym", - "ASAP:ABE-0000322" - ], - [ - "gene_synonym", - "b0090" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17443" - ], - [ - "gene_synonym", - "JW0088" - ] - ], - "dna_sequence": "ATGAGTGGTCAAGGAAAGCGATTAATGGTGATGGCAGGCGGAACCGGTGGACATGTATTCCCGGGACTGGCGGTTGCGCACCATCTAATGGCTCAGGGTTGGCAAGTTCGCTGGCTGGGGACTGCCGACCGTATGGAAGCGGACTTAGTGCCAAAACATGGCATCGAAATTGATTTCATTCGTATCTCTGGTCTGCGTGGAAAAGGTATAAAAGCACTGATAGCTGCCCCGCTGCGTATCTTCAACGCCTGGCGTCAGGCGCGGGCGATTATGAAAGCGTACAAACCTGACGTGGTGCTCGGTATGGGAGGCTACGTGTCAGGTCCAGGTGGTCTGGCCGCGTGGTCGTTAGGCATTCCGGTTGTACTTCATGAACAAAACGGTATTGCGGGCTTAACCAATAAATGGCTGGCGAAGATTGCCACCAAAGTGATGCAGGCGTTTCCAGGTGCTTTCCCTAATGCGGAAGTAGTGGGTAACCCGGTGCGTACCGATGTGTTGGCGCTGCCGTTGCCGCAGCAACGTTTGGCTGGACGTGAAGGTCCGGTTCGTGTGCTGGTAGTGGGTGGTTCTCAGGGCGCACGCATTCTTAACCAGACAATGCCGCAGGTTGCTGCGAAACTGGGTGATTCAGTCACTATCTGGCATCAGAGCGGCAAAGGTTCGCAACAATCCGTTGAACAGGCGTATGCCGAAGCGGGGCAACCGCAGCATAAAGTGACGGAATTTATTGATGATATGGCGGCGGCGTATGCGTGGGCGGATGTCGTCGTTTGCCGCTCCGGTGCGTTAACGGTGAGTGAAATCGCCGCGGCAGGACTACCGGCGTTGTTTGTGCCGTTTCAACATAAAGACCGCCAGCAATACTGGAATGCGCTACCGCTGGAAAAAGCGGGCGCAGCCAAAATTATCGAGCAGCCACAGCTTAGCGTGGATGCTGTCGCCAACACCCTGGCCGGGTGGTCGCGAGAAACCTTATTAACCATGGCAGAACGCGCCCGCGCTGCATCCATTCCGGATGCCACCGAGCGAGTGGCAAATGAAGTGAGCCGGGTTGCCCGGGCGTAA", - "dna_sequence_length": 1068, - "functions": [ - "N-acetylglucosaminyl transferase" - ], - "id": "CDS_88", - "location": [ - [ - "NC_000913", - 99644, - "+", - 1068 - ] - ], - "md5": "436ea6ece80c781e51efcc299bb820b5", - "parent_gene": "", - "protein_md5": "a3ca7531d4c383960ac3b072581ef9e0", - "protein_translation": "MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGNPVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERARAASIPDATERVANEVSRVARA", - "protein_translation_length": 355, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17952" - ], - [ - "gene_synonym", - "GeneID:946153" - ], - [ - "gene_synonym", - "ECK0092" - ], - [ - "gene_synonym", - "murC" - ], - [ - "gene_synonym", - "GI:16128084" - ], - [ - "gene_synonym", - "ASAP:ABE-0000324" - ], - [ - "gene_synonym", - "EcoGene:EG10619" - ], - [ - "gene_synonym", - "NP_414633.1" - ], - [ - "gene_synonym", - "b0091" - ], - [ - "gene_synonym", - "JW0089" - ] - ], - "dna_sequence": "ATGAATACACAACAATTGGCAAAACTGCGTTCCATCGTGCCCGAAATGCGTCGCGTTCGGCACATACATTTTGTCGGCATTGGTGGTGCCGGTATGGGCGGTATTGCCGAAGTTCTGGCCAATGAAGGTTATCAGATCAGTGGTTCCGATTTAGCGCCAAATCCGGTCACGCAGCAGTTAATGAATCTGGGTGCGACGATTTATTTCAACCATCGCCCGGAAAACGTACGTGATGCCAGCGTGGTCGTTGTTTCCAGCGCGATTTCTGCCGATAACCCGGAAATTGTCGCCGCTCATGAAGCGCGTATTCCGGTGATCCGTCGTGCCGAAATGCTGGCTGAGTTAATGCGTTTTCGTCATGGCATCGCCATTGCCGGAACGCACGGCAAAACGACAACCACCGCGATGGTTTCCAGCATCTACGCAGAAGCGGGGCTCGACCCAACCTTCGTTAACGGCGGGCTGGTAAAAGCGGCGGGGGTTCATGCGCGTTTGGGGCATGGTCGGTACCTGATTGCCGAAGCAGATGAGAGTGATGCATCGTTCCTGCATCTGCAACCGATGGTGGCGATTGTCACCAATATCGAAGCCGACCACATGGATACCTACCAGGGCGACTTTGAGAATTTAAAACAGACTTTTATTAATTTTCTGCACAACCTGCCGTTTTACGGTCGTGCGGTGATGTGTGTTGATGATCCGGTGATCCGCGAATTGTTACCGCGAGTGGGGCGTCAGACCACGACTTACGGCTTCAGCGAAGATGCCGACGTGCGTGTAGAAGATTATCAGCAGATTGGCCCGCAGGGGCACTTTACGCTGCTGCGCCAGGACAAAGAGCCGATGCGCGTCACCCTGAATGCGCCAGGTCGTCATAACGCGCTGAACGCCGCAGCTGCGGTTGCGGTTGCTACGGAAGAGGGCATTGACGACGAGGCTATTTTGCGGGCGCTTGAAAGCTTCCAGGGGACTGGTCGCCGTTTTGATTTCCTCGGTGAATTCCCGCTGGAGCCAGTGAATGGTAAAAGCGGTACGGCAATGCTGGTCGATGACTACGGCCACCACCCGACGGAAGTGGACGCCACCATTAAAGCGGCGCGCGCAGGCTGGCCGGATAAAAACCTGGTAATGCTGTTTCAGCCGCACCGTTTTACCCGTACGCGCGACCTGTATGATGATTTCGCCAATGTGCTGACGCAGGTTGATACCCTGTTGATGCTGGAAGTGTATCCGGCTGGCGAAGCGCCAATTCCGGGAGCGGACAGCCGTTCGCTGTGTCGCACAATTCGTGGACGTGGGAAAATTGATCCCATTCTGGTGCCGGATCCGGCGCGGGTAGCCGAGATGCTGGCACCGGTATTAACCGGTAACGACCTGATTCTCGTTCAGGGGGCTGGTAATATTGGAAAAATTGCCCGTTCTTTAGCTGAAATCAAACTGAAGCCGCAAACTCCGGAGGAAGAACAACATGACTGA", 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[ - "gene_synonym", - "GeneID:946324" - ], - [ - "gene_synonym", - "JW0090" - ], - [ - "gene_synonym", - "EcoGene:EG10214" - ], - [ - "gene_synonym", - "ASAP:ABE-0000326" - ], - [ - "gene_synonym", - "ECK0093" - ], - [ - "gene_synonym", - "NP_414634.1" - ], - [ - "gene_synonym", - "ddl" - ], - [ - "gene_synonym", - "ddlB" - ], - [ - "gene_synonym", - "b0092" - ] - ], - "dna_sequence": "ATGACTGATAAAATCGCGGTCCTGTTGGGTGGGACCTCCGCTGAGCGGGAAGTTTCTCTGAATTCTGGCGCAGCGGTGTTAGCCGGACTGCGTGAAGGCGGTATTGACGCGTATCCTGTCGACCCGAAAGAAGTCGACGTGACGCAACTGAAGTCGATGGGCTTTCAGAAAGTGTTTATCGCGCTACACGGTCGCGGCGGTGAAGATGGTACGCTGCAGGGGATGCTCGAGCTGATGGGCTTGCCTTATACCGGAAGCGGAGTGATGGCATCTGCGCTTTCAATGGATAAACTACGCAGCAAACTTCTATGGCAAGGTGCCGGTTTACCGGTCGCGCCGTGGGTAGCGTTAACCCGCGCAGAGTTTGAAAAAGGCCTGAGCGATAAGCAGTTAGCAGAAATTTCTGCTCTGGGTTTGCCGGTTATCGTTAAGCCGAGCCGCGAAGGTTCCAGTGTGGGAATGTCAAAAGTAGTAGCAGAAAATGCTCTACAAGATGCATTAAGATTGGCATTTCAGCACGATGAAGAAGTATTGATTGAAAAATGGCTAAGTGGGCCGGAGTTCACGGTTGCGATACTCGGTGAAGAAATTTTACCGTCAATACGTATTCAACCGTCCGGAACCTTCTATGATTATGAGGCGAAGTATCTCTCTGATGAGACACAGTATTTCTGCCCCGCAGGTCTGGAAGCGTCACAAGAGGCCAATTTGCAGGCATTAGTGCTGAAAGCATGGACGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAA", - "dna_sequence_length": 921, - "functions": [ - "D-alanine:D-alanine ligase" - ], - "id": "CDS_90", - "location": [ - [ - "NC_000913", - 102233, - "+", - 921 - ] - ], - "md5": "ee3cc820d83220e0cbe878dc1564cc51", - "parent_gene": "", - "protein_md5": "54e611311e0e2a239edc3e7c5749607a", - "protein_translation": "MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLSDETQYFCPAGLEASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVRILELAD", - "protein_translation_length": 306, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ftsQ" - ], - [ - "gene_synonym", - "JW0091" - ], - [ - "gene_synonym", - "GeneID:944823" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06136" - ], - [ - "gene_synonym", - "GI:16128086" - ], - [ - "gene_synonym", - "NP_414635.1" - ], - [ - "gene_synonym", - "ECK0094" - ], - [ - "gene_synonym", - "b0093" - ], - [ - "gene_synonym", - "ASAP:ABE-0000329" - ], - [ - "gene_synonym", - "EcoGene:EG10342" - ] - ], - "dna_sequence": "ATGTCGCAGGCTGCTCTGAACACGCGAAACAGCGAAGAAGAGGTTTCTTCTCGCCGCAATAATGGAACGCGTCTGGCGGGGATCCTTTTCCTGCTGACCGTTTTAACGACAGTGTTGGTGAGCGGCTGGGTCGTGTTGGGCTGGATGGAAGATGCGCAACGCCTGCCGCTCTCAAAGCTGGTGTTGACCGGTGAACGCCATTACACACGTAATGACGATATCCGGCAGTCGATCCTGGCATTGGGTGAGCCGGGTACCTTTATGACCCAGGATGTCAACATCATCCAGACGCAAATAGAACAACGCCTGCCGTGGATTAAGCAGGTGAGCGTCAGAAAGCAGTGGCCTGATGAATTGAAGATTCATCTGGTTGAATATGTGCCGATTGCGCGGTGGAATGATCAACATATGGTAGACGCGGAAGGAAATACCTTCAGCGTGCCGCCAGAACGCACCAGCAAGCAGGTGCTTCCAATGCTGTATGGCCCGGAAGGCAGCGCCAATGAAGTGTTGCAGGGCTATCGCGAAATGGGGCAGATGCTGGCAAAGGACAGATTTACTCTGAAGGAAGCGGCGATGACCGCGCGGCGTTCCTGGCAGTTGACGCTGAATAACGATATTAAGCTCAATCTTGGCCGGGGCGATACGATGAAACGTTTGGCTCGCTTTGTAGAACTTTATCCGGTTTTACAGCAGCAGGCGCAAACCGATGGCAAACGGATTAGCTACGTTGATTTGCGTTATGACTCTGGAGCGGCAGTAGGCTGGGCGCCCTTGCCGCCAGAGGAATCTACTCAGCAACAAAATCAGGCACAGGCAGAACAACAATGA", - "dna_sequence_length": 831, - "functions": [ - "divisome assembly protein, membrane anchored protein involved in growth of wall at septum" - ], - "id": "CDS_91", - "location": [ - [ - "NC_000913", - 103155, - "+", - 831 - ] - ], - "md5": "15bdd6f4abdf4de8eed1980c349d5735", - "parent_gene": "", - "protein_md5": "89c302565302e97261ffc4ee483d4770", - "protein_translation": "MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWVVLGWMEDAQRLPLSKLVLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQRLPWIKQVSVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPPERTSKQVLPMLYGPEGSANEVLQGYREMGQMLAKDRFTLKEAAMTARRSWQLTLNNDIKLNLGRGDTMKRLARFVELYPVLQQQAQTDGKRISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ", - "protein_translation_length": 276, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414636.1" - ], - [ - "gene_synonym", - "EcoGene:EG10339" - ], - [ - "gene_synonym", - "ftsA" - ], - [ - "gene_synonym", - "JW0092" - ], - [ - "gene_synonym", - "divA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABH0" - ], - [ - "gene_synonym", - "GI:16128087" - ], - [ - "gene_synonym", - "ASAP:ABE-0000331" - ], - [ - "gene_synonym", - "GeneID:944778" - ], - [ - "gene_synonym", - "ECK0095" - ], - [ - "gene_synonym", - "b0094" - ] - ], - "dna_sequence": "ATGATCAAGGCGACGGACAGAAAACTGGTAGTAGGACTGGAGATTGGTACCGCGAAGGTTGCCGCTTTAGTAGGGGAAGTTCTGCCCGACGGTATGGTCAATATCATTGGCGTGGGCAGCTGCCCGTCGCGTGGTATGGATAAAGGCGGGGTGAACGACCTCGAATCCGTGGTCAAGTGCGTACAACGCGCCATTGACCAGGCAGAATTGATGGCAGATTGTCAGATCTCTTCGGTATATCTGGCGCTTTCTGGTAAGCACATCAGCTGCCAGAATGAAATTGGTATGGTGCCTATTTCTGAAGAAGAAGTGACGCAAGAAGATGTGGAAAACGTCGTCCATACCGCGAAATCGGTGCGTGTGCGCGATGAGCATCGTGTGCTGCATGTGATCCCGCAAGAGTATGCGATTGACTATCAGGAAGGGATCAAGAATCCGGTAGGACTTTCGGGCGTGCGGATGCAGGCAAAAGTGCACCTGATCACATGTCACAACGATATGGCGAAAAACATCGTCAAAGCGGTTGAACGTTGTGGGCTGAAAGTTGACCAACTGATATTTGCCGGACTGGCATCAAGTTATTCGGTATTGACGGAAGATGAACGTGAACTGGGTGTCTGCGTCGTCGATATCGGTGGTGGTACAATGGATATCGCCGTTTATACCGGTGGGGCATTGCGCCACACTAAGGTAATTCCTTATGCTGGCAATGTCGTGACCAGTGATATCGCTTACGCCTTTGGCACGCCGCCAAGCGACGCCGAAGCGATTAAAGTTCGCCACGGTTGTGCGCTGGGTTCCATCGTTGGAAAAGATGAGAGCGTGGAAGTGCCGAGCGTAGGTGGTCGTCCGCCACGGAGTCTGCAACGTCAGACACTGGCAGAGGTGATCGAGCCGCGCTATACCGAGCTGCTCAACCTGGTCAACGAAGAGATATTGCAGTTGCAGGAAAAGCTTCGCCAACAAGGGGTTAAACATCACCTGGCGGCAGGCATTGTATTAACCGGTGGCGCAGCGCAGATCGAAGGTCTTGCAGCCTGTGCTCAGCGCGTGTTTCATACGCAAGTGCGTATCGGCGCGCCGCTGAACATTACCGGTTTAACGGATTATGCTCAGGAGCCGTATTATTCGACGGCGGTGGGATTGCTTCACTATGGGAAAGAGTCACATCTTAACGGTGAAGCTGAAGTAGAAAAACGTGTTACAGCATCAGTTGGCTCGTGGATCAAGCGACTCAATAGTTGGCTGCGAAAAGAGTTTTAA", 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"GI:16128088" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9A6" - ], - [ - "gene_synonym", - "b0095" - ], - [ - "gene_synonym", - "ASAP:ABE-0000333" - ], - [ - "gene_synonym", - "ECK0096" - ], - [ - "gene_synonym", - "EcoGene:EG10347" - ], - [ - "gene_synonym", - "sfiB" - ], - [ - "gene_synonym", - "ftsZ" - ], - [ - "gene_synonym", - "sulB" - ] - ], - "dna_sequence": "ATGTTTGAACCAATGGAACTTACCAATGACGCGGTGATTAAAGTCATCGGCGTCGGCGGCGGCGGCGGTAATGCTGTTGAACACATGGTGCGCGAGCGCATTGAAGGTGTTGAATTCTTCGCGGTAAATACCGATGCACAAGCGCTGCGTAAAACAGCGGTTGGACAGACGATTCAAATCGGTAGCGGTATCACCAAAGGACTGGGCGCTGGCGCTAATCCAGAAGTTGGCCGCAATGCGGCTGATGAGGATCGCGATGCATTGCGTGCGGCGCTGGAAGGTGCAGACATGGTCTTTATTGCTGCGGGTATGGGTGGTGGTACCGGTACAGGTGCAGCACCAGTCGTCGCTGAAGTGGCAAAAGATTTGGGTATCCTGACCGTTGCTGTCGTCACTAAGCCTTTCAACTTTGAAGGCAAGAAGCGTATGGCATTCGCGGAGCAGGGGATCACTGAACTGTCCAAGCATGTGGACTCTCTGATCACTATCCCGAACGACAAACTGCTGAAAGTTCTGGGCCGCGGTATCTCCCTGCTGGATGCGTTTGGCGCAGCGAACGATGTACTGAAAGGCGCTGTGCAAGGTATCGCTGAACTGATTACTCGTCCGGGTTTGATGAACGTGGACTTTGCAGACGTACGCACCGTAATGTCTGAGATGGGCTACGCAATGATGGGTTCTGGCGTGGCGAGCGGTGAAGACCGTGCGGAAGAAGCTGCTGAAATGGCTATCTCTTCTCCGCTGCTGGAAGATATCGACCTGTCTGGCGCGCGCGGCGTGCTGGTTAACATCACGGCGGGCTTCGACCTGCGTCTGGATGAGTTCGAAACGGTAGGTAACACCATCCGTGCATTTGCTTCCGACAACGCGACTGTGGTTATCGGTACTTCTCTTGACCCGGATATGAATGACGAGCTGCGCGTAACCGTTGTTGCGACAGGTATCGGCATGGACAAACGTCCTGAAATCACTCTGGTGACCAATAAGCAGGTTCAGCAGCCAGTGATGGATCGCTACCAGCAGCATGGGATGGCTCCGCTGACCCAGGAGCAGAAGCCGGTTGCTAAAGTCGTGAATGACAATGCGCCGCAAACTGCGAAAGAGCCGGATTATCTGGATATCCCAGCATTCCTGCGTAAGCAAGCTGATTAA", 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- "gene_synonym", - "ECK0097" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A725" - ], - [ - "gene_synonym", - "EcoGene:EG10265" - ], - [ - "gene_synonym", - "ASAP:ABE-0000336" - ], - [ - "gene_synonym", - "envA" - ], - [ - "gene_synonym", - "GI:16128089" - ], - [ - "gene_synonym", - "b0096" - ] - ], - "dna_sequence": "ATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTGACGTTACGCCCTGCGCCGGCCAACACCGGGGTCATCTATCGTCGCACCGACTTGAATCCACCGGTAGATTTCCCGGCCGATGCCAAATCTGTGCGTGATACCATGCTCTGTACGTGTCTGGTCAACGAGCATGATGTACGGATTTCAACCGTAGAGCACCTCAATGCTGCTCTCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCGATAAGTGGGCTGAATTTAAGCCGTACAATGGTTTTTCGCTGGATTTCACCATCGATTTTAACCATCCGGCTATTGATTCCAGCAACCAGCGCTATGCGATGAACTTCTCCGCTGATGCGTTTATGCGCCAGATCAGCCGTGCGCGTACGTTCGGTTTCATGCGTGATATCGAATATCTGCAGTCCCGTGGTTTGTGCCTGGGCGGCAGCTTCGATTGTGCCATCGTTGTTGACGATTATCGCGTACTGAACGAAGACGGCCTGCGTTTTGAAGACGAATTTGTGCGTCACAAAATGCTCGATGCGATCGGTGACTTGTTCATGTGTGGTCACAATATTATTGGTGCATTTACCGCTTATAAATCCGGTCATGCACTGAATAACAAACTGCTGCAGGCTGTCCTGGCGAAACAGGAAGCCTGGGAATATGTGACCTTCCAGGACGACGCAGAACTGCCGTTGGCCTTCAAAGCGCCTTCAGCTGTACTGGCATAA", - "dna_sequence_length": 918, - "functions": [ - "UDP-3-O-acyl N-acetylglucosamine deacetylase" - ], - "id": "CDS_94", - "location": [ - [ - "NC_000913", - 106557, - "+", - 918 - ] - ], - "md5": "8cc8f216b32e59b77f0431f02fd253e2", - "parent_gene": "", - "protein_md5": "bf027aecde1ae723b927b94a26fa4936", - "protein_translation": "MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIPIMDGSAAPFVYLLLDAGIDELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTIDFNHPAIDSSNQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEYVTFQDDAELPLAFKAPSAVLA", - "protein_translation_length": 305, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414639.2" - ], - [ - "gene_synonym", - "GI:90111085" - ], - [ - "gene_synonym", - "ASAP:ABE-0000340" - ], - [ - "gene_synonym", - "GeneID:944831" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P62395" - ], - [ - "gene_synonym", - "JW5007" - ], - [ - "gene_synonym", - "secM" - ], - [ - "gene_synonym", - "yacA" - ], - [ - "gene_synonym", - "EcoGene:EG11087" - ], - [ - "gene_synonym", - "ECK0098" - ], - [ - "gene_synonym", - "srrA" - ], - [ - "gene_synonym", - "b0097" - ] - ], - "dna_sequence": "GTGAGTGGAATACTGACGCGCTGGCGACAGTTTGGTAAACGCTACTTCTGGCCGCATCTCTTATTAGGGATGGTTGCGGCGAGTTTAGGTTTGCCTGCGCTCAGCAACGCCGCCGAACCAAACGCGCCCGCAAAAGCGACAACCCGCAACCACGAGCCTTCAGCCAAAGTTAACTTTGGTCAATTGGCCTTGCTGGAAGCGAACACACGCCGCCCGAATTCGAACTATTCCGTTGATTACTGGCATCAACATGCCATTCGCACGGTAATCCGTCATCTTTCTTTCGCAATGGCACCGCAAACACTGCCCGTTGCTGAAGAATCTTTGCCTCTTCAGGCGCAACATCTTGCATTACTGGATACGCTCAGCGCGCTGCTGACCCAGGAAGGCACGCCGTCTGAAAAGGGTTATCGCATTGATTATGCGCATTTTACCCCACAAGCAAAATTCAGCACGCCCGTCTGGATAAGCCAGGCGCAAGGCATCCGTGCTGGCCCTCAACGCCTCACCTAA", - "dna_sequence_length": 513, - "functions": [ - "regulator of secA translation" - ], - "id": "CDS_95", - "location": [ - [ - "NC_000913", - 107705, - "+", - 513 - ] - ], - "md5": "414b28294691670ed4aa4f021be4d632", - "parent_gene": "", - "protein_md5": "4ee14dd4c0d3b2ce82ead84838f87235", - "protein_translation": "MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNAPAKATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQHAIRTVIRHLSFAMAPQTLPVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQGIRAGPQRLT", - "protein_translation_length": 170, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "secA" - ], - [ - "gene_synonym", - "azi" - ], - [ - "gene_synonym", - "GeneID:944821" - ], - [ - "gene_synonym", - "NP_414640.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000343" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10408" - ], - [ - "gene_synonym", - "EcoGene:EG10936" - ], - [ - "gene_synonym", - "GI:16128091" - ], - [ - "gene_synonym", - "JW0096" - ], - [ - "gene_synonym", - "b0098" - ], - [ - "gene_synonym", - "ECK0099" - ], - [ - "gene_synonym", - "pea" - ], - [ - "gene_synonym", - "prlD" - ] - ], - "dna_sequence": "ATGCTAATCAAATTGTTAACTAAAGTTTTCGGTAGTCGTAACGATCGCACCCTGCGCCGGATGCGCAAAGTGGTCAACATCATCAATGCCATGGAACCGGAGATGGAAAAACTCTCCGACGAAGAACTGAAAGGGAAAACCGCAGAGTTTCGTGCACGTCTGGAAAAAGGCGAAGTGCTGGAAAATCTGATCCCGGAAGCTTTCGCCGTGGTACGTGAGGCAAGTAAGCGCGTCTTTGGTATGCGTCACTTCGACGTTCAGTTACTCGGCGGTATGGTTCTTAACGAACGCTGCATCGCCGAAATGCGTACCGGTGAAGGAAAAACCCTGACCGCAACGCTGCCTGCTTACCTGAACGCACTAACCGGTAAAGGCGTGCACGTAGTTACCGTCAACGACTACCTGGCGCAACGTGACGCCGAAAACAACCGTCCGCTGTTTGAATTCCTTGGCCTGACTGTCGGTATCAACCTGCCGGGCATGCCAGCACCGGCAAAGCGCGAAGCTTACGCAGCTGACATCACTTACGGTACGAACAACGAATACGGCTTTGACTACCTGCGCGACAACATGGCGTTCAGCCCTGAAGAACGTGTACAGCGTAAACTGCACTATGCGCTGGTGGACGAAGTGGACTCCATCCTGATCGATGAAGCGCGTACACCGCTGATCATTTCCGGCCCGGCAGAAGACAGCTCGGAAATGTATAAACGCGTGAATAAAATTATTCCGCACCTGATCCGTCAGGAAAAAGAAGACTCCGAAACCTTCCAGGGCGAAGGCCACTTCTCGGTGGACGAAAAATCTCGCCAGGTGAACCTGACCGAACGTGGTCTGGTGCTGATTGAAGAACTGCTGGTGAAAGAGGGCATCATGGATGAAGGGGAGTCTCTGTACTCTCCGGCCAACATCATGCTGATGCACCACGTAACGGCGGCGCTGCGCGCTCATGCGCTGTTTACCCGTGACGTCGACTACATCGTTAAAGATGGTGAAGTTATCATCGTTGACGAACACACCGGTCGTACCATGCAGGGCCGTCGCTGGTCCGATGGTCTGCACCAGGCTGTGGAAGCGAAAGAAGGTGTGCAGATCCAGAACGAAAACCAAACGCTGGCTTCGATCACCTTCCAGAACTACTTCCGTCTGTATGAAAAACTGGCGGGGATGACCGGTACTGCTGATACCGAAGCTTTCGAATTTAGCTCAATCTACAAGCTGGATACCGTCGTTGTTCCGACCAACCGTCCAATGATTCGTAAAGATCTGCCGGACCTGGTCTACATGACTGAAGCGGAAAAAATTCAGGCGATCATTGAAGATATCAAAGAACGTACTGCGAAAGGCCAGCCGGTGCTGGTGGGTACTATCTCCATCGAAAAATCGGAGCTGGTGTCAAACGAACTGACCAAAGCCGGTATTAAGCACAACGTCCTGAACGCCAAATTCCACGCCAACGAAGCGGCGATTGTTGCTCAGGCAGGTTATCCGGCTGCGGTGACTATCGCGACCAATATGGCGGGTCGTGGTACAGATATTGTGCTCGGTGGTAGCTGGCAGGCAGAAGTTGCCGCGCTGGAAAATCCGACCGCAGAGCAAATTGAAAAAATTAAAGCCGACTGGCAGGTACGTCACGATGCGGTACTGGAAGCAGGTGGCCTGCATATCATCGGTACCGAGCGTCACGAATCCCGTCGTATCGATAACCAGTTGCGCGGTCGTTCTGGTCGTCAGGGGGATGCTGGTTCTTCCCGTTTCTACCTGTCGATGGAAGATGCGCTGATGCGTATTTTTGCTTCCGACCGAGTATCCGGCATGATGCGTAAACTGGGTATGAAGCCAGGCGAAGCCATTGAACACCCGTGGGTGACTAAAGCGATTGCCAACGCCCAGCGTAAAGTTGAAAGCCGTAACTTCGACATTCGTAAGCAACTGCTGGAATATGATGACGTGGCTAACGATCAGCGTCGCGCCATTTACTCCCAGCGTAACGAACTGTTGGATGTCAGCGATGTGAGCGAAACCATTAACAGCATTCGTGAAGATGTGTTCAAAGCGACCATTGATGCCTACATTCCACCACAGTCGCTGGAAGAAATGTGGGATATTCCGGGGCTGCAGGAACGTCTGAAGAACGATTTCGACCTCGATTTGCCAATTGCCGAGTGGCTGGATAAAGAACCAGAACTGCATGAAGAGACGCTGCGTGAGCGCATTCTGGCGCAGTCCATCGAAGTGTATCAGCGTAAAGAAGAAGTGGTTGGTGCTGAGATGATGCGTCACTTCGAGAAAGGCGTCATGCTGCAAACGCTTGACTCCCTGTGGAAAGAGCACCTGGCAGCGATGGACTATCTGCGTCAGGGTATCCACCTGCGTGGCTACGCACAGAAAGATCCGAAGCAGGAATACAAACGTGAATCGTTCTCCATGTTTGCAGCGATGCTGGAGTCGTTGAAATATGAAGTTATCAGTACGCTGAGCAAAGTTCAGGTACGTATGCCTGAAGAGGTTGAGGAGCTGGAACAACAGCGTCGTATGGAAGCCGAGCGTTTAGCGCAAATGCAGCAGCTTAGCCATCAGGATGACGACTCTGCAGCCGCAGCTGCACTGGCGGCGCAAACCGGAGAGCGCAAAGTAGGACGTAACGATCCTTGCCCGTGCGGTTCTGGTAAAAAATACAAGCAGTGCCATGGCCGCCTGCAATAA", 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"MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPGMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPIAEWLDKEPELHEETLRERILAQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQLSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRLQ", - "protein_translation_length": 901, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08337" - ], - [ - "gene_synonym", - "ASAP:ABE-0000346" - ], - [ - "gene_synonym", - "NP_414641.1" - ], - [ - "gene_synonym", - "GI:16128092" - ], - [ - "gene_synonym", - "ECK0100" - ], - [ - "gene_synonym", - "nudA" - ], - [ - "gene_synonym", - "JW0097" - ], - [ - "gene_synonym", - "b0099" - ], - [ - "gene_synonym", - "EcoGene:EG10626" - ], - [ - "gene_synonym", - "GeneID:944824" - ], - [ - "gene_synonym", - "mutT" - ] - ], - "dna_sequence": "ATGAAAAAGCTGCAAATTGCGGTAGGTATTATTCGCAACGAGAACAATGAAATCTTTATAACGCGTCGCGCAGCAGATGCGCACATGGCGAATAAACTGGAGTTTCCCGGCGGTAAAATTGAAATGGGTGAAACGCCGGAACAGGCGGTGGTGCGTGAACTTCAGGAAGAAGTCGGGATTACCCCCCAACATTTTTCGCTATTTGAAAAACTGGAATATGAATTCCCGGACAGGCATATAACACTGTGGTTTTGGCTGGTCGAACGCTGGGAAGGGGAGCCGTGGGGTAAAGAAGGGCAACCCGGTGAGTGGATGTCGCTGGTCGGTCTTAATGCCGATGATTTTCCGCCAGCCAATGAACCGGTAATTGCGAAGCTTAAACGTCTGTAG", - "dna_sequence_length": 390, - "functions": [ - "dGTP-preferring nucleoside triphosphate pyrophosphohydrolase" - ], - "id": "CDS_97", - "location": [ - [ - "NC_000913", - 111044, - "+", - 390 - ] - ], - "md5": "8789f83263e9dd6dd4ed3edd39ceef89", - "parent_gene": "", - "protein_md5": "ad01a70ae0aa1d45b730f946fb47abfd", - "protein_translation": "MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFWLVERWEGEPWGKEGQPGEWMSLVGLNADDFPPANEPVIAKLKRL", - "protein_translation_length": 129, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000351" - ], - [ - "gene_synonym", - "JW5008" - ], - [ - "gene_synonym", - "EcoGene:EG12314" - ], - [ - "gene_synonym", - "GI:16128094" - ], - [ - "gene_synonym", - "b0101" - ], - [ - "gene_synonym", - "ECK0101" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8H8" - ], - [ - "gene_synonym", - "yacG" - ], - [ - "gene_synonym", - "NP_414643.1" - ], - [ - "gene_synonym", - "GeneID:945630" - ] - ], - "dna_sequence": "ATGTCAGAAACTATTACGGTGAATTGCCCAACCTGCGGGAAAACGGTGGTGTGGGGTGAAATCAGCCCGTTTCGGCCATTTTGCTCCAAACGTTGTCAGCTGATCGACCTCGGAGAATGGGCTGCTGAAGAAAAACGAATCCCCAGCAGTGGCGATCTTTCCGAAAGCGATGACTGGAGCGAAGAACCAAAGCAGTGA", - "dna_sequence_length": 198, - "functions": [ - "DNA gyrase inhibitor" - ], - "id": "CDS_98", - "location": [ - [ - "NC_000913", - 111846, - "-", - 198 - ] - ], - "md5": "3be08b0c49a9fc5195dc716af0560f0d", - "parent_gene": "", - "protein_md5": "389a5dad656b70da31de26225cbe2bab", - "protein_translation": "MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEEKRIPSSGDLSESDDWSEEPKQ", - "protein_translation_length": 65, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0099" - ], - [ - "gene_synonym", - "GeneID:944873" - ], - [ - "gene_synonym", - "ASAP:ABE-0000355" - ], - [ - "gene_synonym", - "NP_414644.1" - ], - [ - "gene_synonym", - "b0102" - ], - [ - "gene_synonym", - "GI:16128095" - ], - [ - "gene_synonym", - "ECK0102" - ], - [ - "gene_synonym", - "yacF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36680" - ], - [ - "gene_synonym", - "zapD" - ], - [ - "gene_synonym", - "EcoGene:EG12313" - ] - ], - "dna_sequence": "ATGCAGACCCAGGTCCTTTTTGAACATCCACTAAATGAAAAAATGCGTACATGGCTGCGCATTGAGTTTTTGATTCAGCAACTCACCGTTAATTTACCCATCGTTGACCACGCTGGCGCGCTGCATTTCTTCCGTAATGTCAGTGAATTACTGGATGTTTTCGAGCGCGGCGAAGTCCGCACTGAGCTGTTGAAAGAACTTGACCGGCAGCAACGTAAACTCCAGACCTGGATTGGCGTGCCTGGCGTGGACCAGAGCCGTATTGAAGCATTAATTCAGCAGTTAAAAGCGGCGGGGAGCGTATTAATTTCCGCGCCGCGTATCGGGCAATTTCTGCGTGAAGATCGTTTGATTGCTCTGGTGCGTCAGCGACTGAGCATCCCAGGCGGCTGTTGCAGCTTTGATTTACCTACATTGCACATTTGGCTGCATCTACCCCAGGCGCAGCGCGACAGCCAGGTAGAAACCTGGATTGCCAGCCTGAACCCGCTCACCCAGGCACTTACCATGGTGCTGGATTTAATTCGCCAGTCGGCCCCCTTCCGTAAACAAACCAGCCTGAATGGTTTTTATCAGGATAACGGTGGCGATGCCGACTTGCTGCGCCTGAATCTGTCGCTCGATTCACAGCTTTATCCGCAAATTTCCGGACATAAGAGCCGTTTTGCCATTCGTTTTATGCCGCTGGACACTGAAAACGGACAGGTACCGGAACGTCTGGATTTCGAACTGGCCTGTTGCTAA", - "dna_sequence_length": 744, - "functions": [ - "FtsZ stabilizer" - ], - "id": "CDS_99", - "location": [ - [ - "NC_000913", - 112599, - "-", - 744 - ] - ], - "md5": "a8abc1c4a902792b59d8b5dd2a343bd1", - "parent_gene": "", - "protein_md5": "5403583dde618abfb0e97a384af9b5da", - "protein_translation": "MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFFRNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVLISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIASLNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGHKSRFAIRFMPLDTENGQVPERLDFELACC", - "protein_translation_length": 247, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414645.1" - ], - [ - "gene_synonym", - "yacE" - ], - [ - "gene_synonym", - "ASAP:ABE-0000357" - ], - [ - "gene_synonym", - "GI:16128096" - ], - [ - "gene_synonym", - "b0103" - ], - [ - "gene_synonym", - "GeneID:949060" - ], - [ - "gene_synonym", - "ECK0103" - ], - [ - "gene_synonym", - "EcoGene:EG12312" - ], - [ - "gene_synonym", - "JW0100" - ], - [ - "gene_synonym", - "coaE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6I9" - ] - ], - "dna_sequence": "ATGAGGTATATAGTTGCCTTAACGGGAGGCATTGGCAGTGGCAAGAGTACCGTTGCCAATGCGTTTGCTGATCTCGGAATTAACGTCATTGATGCCGATATTATTGCGCGTCAGGTGGTTGAACCAGGTGCACCTGCGCTACATGCCATTGCTGATCACTTTGGCGCTAACATGATTGCTGCTGATGGAACATTGCAGCGCCGGGCCTTGCGCGAGCGGATCTTCGCCAACCCGGAAGAGAAAAACTGGCTTAACGCCCTGCTGCATCCGCTGATTCAGCAAGAGACGCAACACCAGATCCAGCAAGCTACTTCCCCCTATGTACTGTGGGTTGTGCCATTGCTGGTAGAAAACTCACTGTATAAAAAAGCGAATCGAGTGCTTGTGGTGGATGTCAGCCCAGAAACGCAACTTAAGCGCACCATGCAGCGCGATGATGTAACTCGCGAGCATGTCGAACAAATCCTTGCTGCTCAGGCAACGCGCGAAGCCCGCCTTGCCGTGGCAGATGACGTCATTGATAATAACGGCGCACCGGATGCTATCGCATCGGATGTTGCCCGCCTGCACGCACACTATTTGCAGCTTGCGTCGCAGTTTGTCTCACAGGAAAAACCGTAA", - "dna_sequence_length": 621, - "functions": [ - "dephospho-CoA kinase" - ], - "id": "CDS_100", - "location": [ - [ - "NC_000913", - 113219, - "-", - 621 - ] - ], - "md5": "983f26db7447e6f438106ac3053e37f0", - "parent_gene": "", - "protein_md5": "a298a24b75c6cca43bd5aa7079e218e8", - "protein_translation": "MRYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGAPALHAIADHFGANMIAADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQATREARLAVADDVIDNNGAPDAIASDVARLHAHYLQLASQFVSQEKP", - "protein_translation_length": 206, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "guaC" - ], - [ - "gene_synonym", - "b0104" - ], - [ - "gene_synonym", - "ASAP:ABE-0000362" - ], - [ - "gene_synonym", - "GI:16128097" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60560" - ], - [ - "gene_synonym", - "GeneID:948986" - ], - [ - "gene_synonym", - "NP_414646.1" - ], - [ - "gene_synonym", - "ECK0104" - ], - [ - "gene_synonym", - "JW0101" - ], - [ - "gene_synonym", - "EcoGene:EG10422" - ] - ], - "dna_sequence": "ATGCGTATTGAAGAAGATCTGAAGTTAGGTTTTAAAGACGTTCTCATCCGCCCTAAACGCTCCACTCTTAAAAGCCGTTCCGATGTTGAACTGGAACGTCAATTCACCTTCAAACATTCAGGTCAGAGCTGGTCCGGCGTGCCGATTATCGCCGCAAATATGGACACCGTAGGCACATTTTCTATGGCCTCTGCGCTGGCTTCTTTTGATATTTTGACTGCTGTGCATAAACACTATTCTGTCGAAGAGTGGCAAGCGTTTATCAACAATTCTTCCGCTGATGTGCTGAAACATGTGATGGTTTCTACCGGTACGTCTGATGCGGATTTCGAAAAAACTAAACAGATTCTCGACCTGAACCCGGCATTAAACTTCGTTTGTATTGACGTGGCGAATGGTTATTCCGAACACTTCGTGCAGTTCGTTGCGAAAGCGCGTGAAGCGTGGCCGACCAAAACCATTTGTGCTGGTAACGTAGTGACTGGTGAAATGTGTGAGGAGCTTATCCTCTCAGGTGCCGATATCGTTAAAGTTGGCATTGGCCCAGGTTCTGTTTGTACAACTCGCGTCAAAACAGGCGTCGGTTATCCGCAACTTTCTGCGGTAATCGAATGTGCCGATGCTGCGCACGGTCTGGGCGGAATGATCGTCAGCGATGGTGGCTGCACCACGCCGGGCGATGTGGCGAAAGCCTTTGGCGGCGGTGCCGATTTCGTCATGCTTGGCGGCATGCTGGCGGGCCACGAAGAGAGCGGCGGTCGCATCGTTGAGGAGAACGGCGAGAAATTTATGCTGTTCTACGGCATGAGCTCCGAGTCTGCGATGAAACGTCACGTTGGCGGCGTTGCGGAATATCGCGCAGCAGAAGGTAAAACCGTTAAGCTGCCGCTGCGAGGCCCGGTTGAAAATACCGCGCGAGATATTTTGGGCGGCCTGCGTTCAGCTTGTACATACGTTGGGGCTTCACGCCTGAAAGAGCTGACCAAGCGCACCACGTTTATTCGTGTGCAGGAACAAGAAAACCGCATCTTCAACAACCTGTAA", 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[ - "gene_synonym", - "NP_414648.1" - ], - [ - "gene_synonym", - "ECK0105" - ], - [ - "gene_synonym", - "yacD" - ], - [ - "gene_synonym", - "hopC" - ], - [ - "gene_synonym", - "JW0102" - ], - [ - "gene_synonym", - "EcoGene:EG11798" - ] - ], - "dna_sequence": "ATGGCGAGTAAGCAACTCTGGCGCTGGCATGGCATAACCGGCGACGGCAATGCGCAAGATGGGATGCTATGGGCAGAGAGCCGTACTTTACTGCTTATGGCACTACAGCAACAGATGGTTACCCCACTAAGCCTGAAGCGAATCGCCATCAATTCTGCGCAGTGGCGAGGAGATAAAAGCGCGGAAGTCATTCATCAACTGGCGACGCTACTCAAAGCAGGGTTAACGCTTTCTGAAGGGCTGGCTCTGCTGGCGGAACAGCATCCCAGTAAGCAATGGCAAGCGTTGCTGCAATCGCTGGCGCACGATCTCGAACAGGGCATTGCTTTTTCCAATGCCTTATTACCCTGGTCAGAGGTATTTCCGCCGCTCTATCAGGCGATGATCCGCACGGGTGAACTGACCGGTAAGCTGGATGAATGCTGCTTTGAACTGGCGCGTCAGCAAAAAGCCCAGCGTCAGTTGACCGACAAAGTGAAATCAGCGTTACGTTATCCCATCATCATTTTAGCGATGGCAATCATGGTGGTTGTGGCAATGCTGCATTTTGTTCTGCCGGAGTTTGCCGCTATCTATAAGACCTTCAACACCCCACTACCGGCACTAACGCAGGGGATCATGACGCTGGCAGACTTTAGTGGCGAATGGAGCTGGCTGCTGGTGTTGTTCGGCTTTCTGCTGGCGATAGCCAATAAGTTGCTGATGCGCCGACCGACCTGGCTTATAGTGCGGCAGAAATTGCTGTTACGCATCCCGATTATGGGTTCACTGATGCGGGGACAAAAACTCACGCAGATCTTTACGATTCTGGCGCTGACACAAAGTGCAGGCATTACTTTTTTACAGGGCGTAGAGAGCGTCAGAGAAACAATGCGCTGCCCGTACTGGGTGCAACTTCTGACACAAATCCAGCACGATATCAGTAACGGTCAACCCATCTGGCTGGCGCTAAAAAATACCGGTGAGTTTAGCCCGCTCTGTTTGCAATTAGTGAGAACAGGAGAGGCATCCGGCTCTCTGGATCTCATGTTAGACAACCTCGCCCATCATCATCGGGAAAACACAATGGCGCTGGCGGATAACCTCGCAGCCTTACTGGAACCGGCGTTGCTGATCATAACGGGAGGAATTATTGGTACGCTGGTGGTGGCAATGTATCTGCCAATTTTCCATTTAGGCGATGCGATGAGTGGGATGGGATAA", 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"UniProtKB/Swiss-Prot:P36645" - ], - [ - "gene_synonym", - "EcoGene:EG12106" - ], - [ - "gene_synonym", - "hofB" - ], - [ - "gene_synonym", - "GeneID:947481" - ], - [ - "gene_synonym", - "JW0103" - ], - [ - "gene_synonym", - "ECK0106" - ], - [ - "gene_synonym", - "hopB" - ], - [ - "gene_synonym", - "NP_414649.1" - ] - ], - "dna_sequence": "ATGAATATTCCACAGCTCACTGCCCTGTGTCTGCGTTATCATGGAGTCTTGCTGGATGCCAGCGAAGAGGTGGTTCATGTTGCGGTAGTCGATGCACCTTCGCATGAGCTACTGGACGCATTGCATTTCGCTACCACCAAACGTATTGAGATCACCTGCTGGACGCGCCAACAAATGGAAGGTCACGCCAGTCGCACACAACAGACATTGCCCGTAGCTGTTCAGGAGAAGCATCAGCCCAAAGCAGAGTTGCTAACTCGAACGTTACAATCTGCGCTGGAACAACGCGCGTCTGATATTCATATCGAACCAGCGGACAATGCCTACCGCATCCGCTTGCGTATCGACGGCGTATTGCATCCTTTACCGGATGTTTCACCGGATGCCGGAGTCGCATTAACCGCCAGATTAAAAGTGCTGGGAAACCTGGATATTGCGGAACATCGCCTGCCGCAGGACGGGCAATTCACTGTCGAACTGGCAGGAAACGCCGTCTCATTTCGTATTGCGACCTTACCATGTCGGGGTGGTGAAAAGGTGGTATTAAGGTTGTTACAGCAGGTGGGTCAGGCACTGGATGTCAACACGCTTGGAATGCAGCCGTTACAACTGGCGGACTTTGCTCATGCCTTGCAACAACCACAGGGACTGGTGCTGGTAACTGGCCCTACCGGCAGCGGCAAAACGGTCACGCTTTATAGTGCCCTGCAAAAGCTGAATACCGCTGACATTAATATTTGTAGCGTCGAAGATCCAGTTGAGATCCCCATAGCCGGACTAAACCAGACGCAAATCCATCCGCGTGCCGGACTCACCTTTCAGGGCGTTTTGCGTGCGTTATTGCGCCAGGATCCTGACGTCATCATGATCGGAGAGATCCGCGATGGCGAAACAGCAGAGATCGCTATTAAAGCGGCGCAAACTGGTCACCTGGTGTTGTCTACCCTACACACTAATTCCACCTGCGAAACGCTGGTACGTTTACAGCAAATGGGGGTCGCCCGCTGGATGCTATCATCGGCGCTTACGCTGGTAATAGCCCAGCGTCTGGTACGCAAACTTTGCCCACATTGTCGCCGGCAGCAAGGGGAGCCCATCCACATTCCAGACAATGTATGGCCATCGCCGCTGCCCCACTGGCAGGCACCCGGTTGTGTACATTGCTACCACGGTTTTTATGGTCGTACGGCCTTATTTGAAGTTCTGCCCATAACGCCGGTCATTCGTCAGCTTATTTCCGCTAATACCGACGTTGAATCGCTGGAAACGCACGCACGACAGGCGGGTATGCGTACGCTTTTTGAAAACGGCTGCCTGGCCGTAGAGCAAGGCTTAACCACCTTTGAAGAGTTAATCCGCGTACTGGGGATGCCGCATGGCGAGTAA", - "dna_sequence_length": 1386, - "functions": [ - "T2SE secretion family protein", - "P-loop ATPase superfamily protein" - ], - "id": "CDS_103", - "location": [ - [ - "NC_000913", - 117099, - "-", - 1386 - ] - ], - "md5": "47695ea63fe0012401482f32499cde33", - "parent_gene": "", - "protein_md5": "3137a58a24bdcdf04c81fcf0c2041571", - "protein_translation": "MNIPQLTALCLRYHGVLLDASEEVVHVAVVDAPSHELLDALHFATTKRIEITCWTRQQMEGHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHIEPADNAYRIRLRIDGVLHPLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVELAGNAVSFRIATLPCRGGEKVVLRLLQQVGQALDVNTLGMQPLQLADFAHALQQPQGLVLVTGPTGSGKTVTLYSALQKLNTADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISANTDVESLETHARQAGMRTLFENGCLAVEQGLTTFEELIRVLGMPHGE", - "protein_translation_length": 461, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000372" - ], - [ - "gene_synonym", - "GI:16128101" - ], - [ - "gene_synonym", - "b0108" - ], - [ - "gene_synonym", - "EcoGene:EG12107" - ], - [ - "gene_synonym", - "ppdD" - ], - [ - "gene_synonym", - "NP_414650.1" - ], - [ - "gene_synonym", - "JW0104" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36647" - ], - [ - "gene_synonym", - "ECK0107" - ], - [ - "gene_synonym", - "GeneID:945817" - ] - ], - "dna_sequence": "ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTATTCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAGAGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGCTATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCATGACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGCAAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA", - "dna_sequence_length": 441, - "functions": [ - "putative prepilin peptidase-dependent pilin" - ], - "id": "CDS_104", - "location": [ - [ - "NC_000913", - 117549, - "-", - 441 - ] - ], - "md5": "482f095c27bf82d94de9d72748b68bb4", - "parent_gene": "", - "protein_md5": "6ad437c6258227e99ba583609f236310", - "protein_translation": "MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN", - "protein_translation_length": 146, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000374" - ], - [ - "gene_synonym", - "EcoGene:EG11546" - ], - [ - "gene_synonym", - "GI:16128102" - ], - [ - "gene_synonym", - "b0109" - ], - [ - "gene_synonym", - "nadC" - ], - [ - "gene_synonym", - "GeneID:948869" - ], - [ - "gene_synonym", - "JW0105" - ], - [ - "gene_synonym", - "NP_414651.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30011" - ], - [ - "gene_synonym", - "ECK0108" - ] - ], - "dna_sequence": "ATGCCGCCTCGCCGCTATAACCCTGACACCCGACGTGACGAGCTGCTGGAACGCATTAATCTCGATATCCCCGGCGCGGTGGCCCAGGCGCTGCGGGAAGATTTAGGCGGAACAGTCGATGCCAACAATGATATTACGGCAAAACTTTTACCGGAAAATTCTCGCTCTCATGCCACGGTGATCACCCGCGAGAATGGCGTCTTTTGCGGCAAACGCTGGGTTGAAGAGGTGTTTATTCAACTGGCAGGCGACGATGTCACCATAATCTGGCATGTGGATGACGGCGATGTCATCAATGCCAATCAATCCTTGTTCGAACTTGAAGGCCCATCCCGCGTGCTGTTAACGGGCGAACGCACTGCGCTTAATTTTGTGCAAACCCTTTCAGGAGTTGCCAGTAAGGTACGCCACTATGTCGAATTGCTGGAAGGCACCAACACGCAGTTGTTGGATACGCGCAAAACCTTACCCGGCCTGCGTTCAGCTCTGAAATACGCGGTACTTTGCGGCGGCGGAGCGAATCACCGTCTGGGGCTTTCTGATGCCTTCCTGATCAAAGAAAACCATATTATTGCCTCCGGCTCAGTGCGCCAGGCGGTCGAAAAAGCGTCCTGGCTGCACCCGGATGCGCCAGTAGAAGTCGAAGTAGAGAATCTGGAAGAACTTGATGAAGCCCTGAAAGCAGGAGCCGATATCATCATGCTGGATAACTTCGAAACAGAACAGATGCGCGAAGCCGTCAAACGCACCAACGGCAAGGCGCTACTGGAAGTGTCTGGCAACGTCACTGACAAAACACTGCGTGAATTTGCCGAAACGGGCGTGGACTTTATCTCCGTCGGTGCGCTAACTAAACACGTACAAGCACTCGACCTTTCAATGCGTTTTCGCTAA", - "dna_sequence_length": 894, - "functions": [ - "quinolinate phosphoribosyltransferase" - ], - "id": "CDS_105", - "location": [ - [ - "NC_000913", - 118645, - "-", - 894 - ] - ], - "md5": "83bc09b727d2525b97a1d21e76072356", - "parent_gene": "", - "protein_md5": "3f6a3d6ff2239a91fb28445f5e4c327c", - "protein_translation": "MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANNDITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQSLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLRSALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVENLEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVDFISVGALTKHVQALDLSMRFR", - "protein_translation_length": 297, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414652.1" - ], - [ - "gene_synonym", - "EcoGene:EG10041" - ], - [ - "gene_synonym", - "GeneID:948877" - ], - [ - "gene_synonym", - "GI:16128103" - ], - [ - "gene_synonym", - "ASAP:ABE-0000380" - ], - [ - "gene_synonym", - "b0110" - ], - [ - "gene_synonym", - "ampD" - ], - [ - "gene_synonym", - "JW0106" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P13016" - ], - [ - "gene_synonym", - "ECK0109" - ] - ], - "dna_sequence": "ATGTTGTTAGAACAGGGGTGGCTGGTTGGCGCGCGCCGCGTTCCCTCACCACATTACGATTGCCGCCCGGATGACGAAACACCCACCCTGCTGGTGGTGCACAATATTAGCCTGCCGCCAGGCGAGTTTGGCGGTCCGTGGATCGACGCATTATTCACTGGAACTATTGATCCGCAGGCACATCCTTTCTTTGCTGAGATCGCCCATTTGCGCGTCTCCGCTCACTGTTTGATTCGCCGTGATGGTGAAATAGTCCAGTATGTTCCTTTCGATAAACGTGCATGGCATGCGGGAGTCTCTCAGTATCAGGGGCGCGAACGCTGCAATGATTTTTCTATTGGGATTGAGCTTGAAGGCACCGATACGCTGGCGTATACCGATGCGCAGTATCAACAGCTTGCGGCGGTTACGCGGGCACTGATTGATTGCTATCCGGATATCGCTAAAAACATGACGGGCCATTGTGATATTGCGCCGGATCGGAAAACCGATCCCGGTCCTGCATTTGATTGGGCACGGTTTCGTGTGCTGGTCAGCAAGGAGACAACATGA", - "dna_sequence_length": 552, - "functions": [ - "1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent", - "murein amidase" - ], - "id": "CDS_106", - "location": [ - [ - "NC_000913", - 118733, - "+", - 552 - ] - ], - "md5": "2aa634fbc8a5b6046e1aba5e691c63d5", - "parent_gene": "", - "protein_md5": "3b4a18f012c60d06e90e4851e219312c", - "protein_translation": "MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKETT", - "protein_translation_length": 183, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128104" - ], - [ - "gene_synonym", - "ASAP:ABE-0000382" - ], - [ - "gene_synonym", - "NP_414653.1" - ], - [ - "gene_synonym", - "EcoGene:EG10042" - ], - [ - "gene_synonym", - "GeneID:946678" - ], - [ - "gene_synonym", - "b0111" - ], - [ - "gene_synonym", - "ampE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE14" - ], - [ - "gene_synonym", - "JW0107" - ], - [ - "gene_synonym", - "ECK0110" - ] - ], - "dna_sequence": "ATGACGCTATTTACAACCTTACTGGTGTTAATTTTCGAGCGCCTGTTTAAGTTGGGCGAGCACTGGCAGCTTGATCATCGTCTTGAAGCGTTCTTTCGGCGGGTGAAACATTTTTCTCTCGGGCGCACGTTAGGCATGACCATTATTGCGATGGGCGTGACTTTTTTACTGTTACGCGCATTGCAGGGAGTATTGTTCAACGTTCCCACGCTACTGGTGTGGCTGCTGATTGGTTTGCTGTGTATTGGCGCAGGTAAAGTTCGTCTTCATTATCATGCTTATCTGACAGCTGCTTCACGTAATGATAGCCATGCCCGTGCCACGATGGCTGGCGAACTCACCATGATTCACGGCGTCCCGGCAGGCTGCGACGAACGTGAGTATTTGCGTGAGCTGCAAAATGCATTGCTGTGGATTAACTTTCGTTTTTATCTTGCACCGCTGTTCTGGCTGATTGTGGGGGGAACCTGGGGACCCGTTACGCTGATGGGGTATGCGTTTTTGCGTGCATGGCAATACTGGCTGGCGCGATATCAGACGCCGCATCATCGTTTACAGTCCGGCATTGATGCCGTGCTTCATGTACTGGATTGGGTGCCGGTTCGTCTTGCGGGTGTGGTATATGCCTTGATCGGTCATGGTGAGAAAGCGTTACCGGCCTGGTTTGCTTCGCTGGGTGATTTCCATACTTCGCAGTATCAGGTGTTAACGCGTCTGGCGCAGTTCTCTCTGGCGCGTGAACCGCATGTCGATAAGGTGGAGACGCCGAAGGCAGCGGTTTCAATGGCGAAGAAAACCTCGTTCGTGGTCGTGGTGGTGATTGCACTACTGACGATTTACGGGGCGTTGGTGTAA", - "dna_sequence_length": 855, - "functions": [ - "ampicillin resistance inner membrane protein", - "putative signaling protein in beta-lactamase regulation" - ], - "id": "CDS_107", - "location": [ - [ - "NC_000913", - 119281, - "+", - 855 - ] - ], - "md5": "6ca9d5085e97b2904925e7011510a035", - "parent_gene": "", - "protein_md5": "b8adf77916259d7103ab136bcf59a655", - "protein_translation": "MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTLGMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRNDSHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPVTLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKALPAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIALLTIYGALV", - "protein_translation_length": 284, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "aroP" - ], - [ - "gene_synonym", - "GI:16128105" - ], - [ - "gene_synonym", - "ASAP:ABE-0000384" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15993" - ], - [ - "gene_synonym", - "b0112" - ], - [ - "gene_synonym", - "EcoGene:EG10084" - ], - [ - "gene_synonym", - "NP_414654.1" - ], - [ - "gene_synonym", - "GeneID:946018" - ], - [ - "gene_synonym", - "JW0108" - ], - [ - "gene_synonym", - "ECK0111" - ] - ], - "dna_sequence": "ATGATGGAAGGTCAACAGCACGGCGAGCAGCTAAAGCGCGGCCTTAAAAACCGCCATATTCAGCTTATCGCGCTGGGTGGCGCGATAGGGACCGGGTTATTCCTGGGTAGCGCCTCCGTAATACAGTCCGCAGGGCCAGGGATTATCCTGGGTTACGCCATTGCTGGTTTTATCGCCTTTCTGATCATGCGTCAGCTGGGTGAAATGGTGGTCGAAGAACCTGTCGCAGGCTCCTTTAGCCACTTTGCTTATAAATACTGGGGCAGTTTTGCCGGTTTCGCCTCTGGCTGGAACTACTGGGTACTGTACGTTTTAGTTGCCATGGCTGAGCTGACTGCCGTGGGTAAATACATTCAGTTCTGGTATCCGGAAATCCCCACCTGGGTTTCTGCCGCCGTATTCTTTGTGGTGATTAACGCCATCAACCTGACCAACGTTAAAGTGTTTGGCGAGATGGAGTTCTGGTTTGCCATTATCAAAGTTATCGCGGTGGTAGCGATGATCATCTTCGGCGGCTGGCTGCTATTCAGTGGCAACGGCGGCCCGCAGGCGACCGTTAGCAACCTGTGGGATCAGGGTGGTTTCCTGCCGCACGGCTTCACCGGGCTGGTGATGATGATGGCGATTATCATGTTCTCGTTCGGTGGTCTGGAACTGGTGGGGATCACCGCAGCAGAAGCTGATAACCCGGAGCAAAGTATACCGAAAGCAACTAACCAGGTTATCTACCGCATCCTGATTTTCTATATTGGTTCGTTAGCCGTTCTGCTCTCACTGATGCCGTGGACCCGCGTTACCGCCGATACCAGTCCGTTTGTGCTGATCTTCCACGAGTTAGGCGATACCTTTGTGGCGAATGCGCTGAACATCGTGGTACTGACTGCGGCGCTCTCCGTGTACAACAGCTGCGTATATTGCAACAGCCGTATGCTGTTTGGTCTGGCACAACAGGGTAATGCGCCAAAAGCGCTGGCGTCTGTCGATAAACGTGGTGTACCAGTAAATACCATTCTGGTGTCTGCACTGGTAACGGCGTTGTGCGTACTGATTAACTACCTTGCCCCAGAGTCCGCTTTCGGACTGTTAATGGCGCTGGTGGTATCTGCACTGGTAATCAACTGGGCGATGATTAGCCTGGCGCATATGAAATTCCGTCGCGCCAAGCAGGAACAAGGCGTGGTAACTCGCTTCCCTGCTCTGCTTTATCCGCTGGGTAACTGGATCTGCCTGCTGTTTATGGCGGCGGTACTGGTGATTATGCTGATGACCCCAGGAATGGCGATTTCGGTATACCTGATCCCGGTATGGCTGATCGTGTTAGGTATCGGCTATCTGTTTAAAGAGAAAACCGCCAAAGCCGTAAAAGCGCATTAA", - "dna_sequence_length": 1374, - "functions": [ - "aromatic amino acid transporter" - ], - "id": "CDS_108", - "location": [ - [ - "NC_000913", - 121551, - "-", - 1374 - ] - ], - "md5": "ae7182eab8f54303d1fb58001c25c509", - "parent_gene": "", - "protein_md5": "ee01be8c1c7402256b5d426934c9b15c", - "protein_translation": "MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKTAKAVKAH", - "protein_translation_length": 457, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000394" - ], - [ - "gene_synonym", - "GI:16128106" - ], - [ - "gene_synonym", - "aceC" - ], - [ - "gene_synonym", - "pdhR" - ], - [ - "gene_synonym", - "NP_414655.1" - ], - [ - "gene_synonym", - "GeneID:944827" - ], - [ - "gene_synonym", - "b0113" - ], - [ - "gene_synonym", - "yacB" - ], - [ - "gene_synonym", - "EcoGene:EG11088" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACL9" - ], - [ - "gene_synonym", - "genA" - ], - [ - "gene_synonym", - "ECK0112" - ], - [ - "gene_synonym", - "JW0109" - ] - ], - "dna_sequence": "ATGGCCTACAGCAAAATCCGCCAACCAAAACTCTCCGATGTGATTGAGCAGCAACTGGAGTTTTTGATCCTCGAAGGCACTCTCCGCCCGGGCGAAAAACTCCCACCGGAACGCGAACTGGCAAAACAGTTTGACGTCTCCCGTCCCTCCTTGCGTGAGGCGATTCAACGTCTCGAAGCGAAGGGCTTGTTGCTTCGTCGCCAGGGTGGCGGCACTTTTGTCCAGAGCAGCCTATGGCAAAGCTTCAGCGATCCGCTGGTGGAGCTGCTCTCCGACCATCCTGAGTCACAGTATGACTTGCTCGAAACACGACACGCCCTGGAAGGTATCGCCGCTTATTACGCCGCGCTGCGTAGTACCGATGAAGACAAGGAACGCATCCGTGAACTCCACCACGCCATAGAGCTGGCGCAGCAGTCTGGCGATCTGGACGCGGAATCAAACGCCGTACTCCAGTATCAGATTGCCGTCACCGAAGCGGCCCACAATGTGGTTCTGCTTCATCTGCTAAGGTGTATGGAGCCGATGTTGGCCCAGAATGTCCGCCAGAACTTCGAATTGCTCTATTCGCGTCGCGAGATGCTGCCGCTGGTGAGTAGTCACCGCACCCGCATATTTGAAGCGATTATGGCCGGTAAGCCGGAAGAAGCGCGCGAAGCATCGCATCGCCATCTGGCCTTTATCGAAGAAATTTTGCTCGACAGAAGTCGTGAAGAGAGCCGCCGTGAGCGTTCTCTGCGTCGTCTGGAGCAACGAAAGAATTAG", - "dna_sequence_length": 765, - "functions": [ - "pyruvate dehydrogenase complex repressor", - "autorepressor" - ], - "id": "CDS_109", - "location": [ - [ - "NC_000913", - 122092, - "+", - 765 - ] - ], - "md5": "42adbab6ee98448eb597dd7b5639ec05", - "parent_gene": "", - "protein_md5": "46a9878e5f5f0a1f25c26a908baa14ab", - "protein_translation": "MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLETRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEAAHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAREASHRHLAFIEEILLDRSREESRRERSLRRLEQRKN", - "protein_translation_length": 254, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128107" - ], - [ - "gene_synonym", - "NP_414656.1" - ], - [ - "gene_synonym", - "b0114" - ], - [ - "gene_synonym", - "GeneID:944834" - ], - [ - "gene_synonym", - "aceE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFG8" - ], - [ - "gene_synonym", - "ASAP:ABE-0000397" - ], - [ - "gene_synonym", - "JW0110" - ], - [ - "gene_synonym", - "EcoGene:EG10024" - ], - [ - "gene_synonym", - "ECK0113" - ] - ], - "dna_sequence": "ATGTCAGAACGTTTCCCAAATGACGTGGATCCGATCGAAACTCGCGACTGGCTCCAGGCGATCGAATCGGTCATCCGTGAAGAAGGTGTTGAGCGTGCTCAGTATCTGATCGACCAACTGCTTGCTGAAGCCCGCAAAGGCGGTGTAAACGTAGCCGCAGGCACAGGTATCAGCAACTACATCAACACCATCCCCGTTGAAGAACAACCGGAGTATCCGGGTAATCTGGAACTGGAACGCCGTATTCGTTCAGCTATCCGCTGGAACGCCATCATGACGGTGCTGCGTGCGTCGAAAAAAGACCTCGAACTGGGCGGCCATATGGCGTCCTTCCAGTCTTCCGCAACCATTTATGATGTGTGCTTTAACCACTTCTTCCGTGCACGCAACGAGCAGGATGGCGGCGACCTGGTTTACTTCCAGGGCCACATCTCCCCGGGCGTGTACGCTCGTGCTTTCCTGGAAGGTCGTCTGACTCAGGAGCAGCTGGATAACTTCCGTCAGGAAGTTCACGGCAATGGCCTCTCTTCCTATCCGCACCCGAAACTGATGCCGGAATTCTGGCAGTTCCCGACCGTATCTATGGGTCTGGGTCCGATTGGTGCTATTTACCAGGCTAAATTCCTGAAATATCTGGAACACCGTGGCCTGAAAGATACCTCTAAACAAACCGTTTACGCGTTCCTCGGTGACGGTGAAATGGACGAACCGGAATCCAAAGGTGCGATCACCATCGCTACCCGTGAAAAACTGGATAACCTGGTCTTCGTTATCAACTGTAACCTGCAGCGTCTTGACGGCCCGGTCACCGGTAACGGCAAGATCATCAACGAACTGGAAGGCATCTTCGAAGGTGCTGGCTGGAACGTGATCAAAGTGATGTGGGGTAGCCGTTGGGATGAACTGCTGCGTAAGGATACCAGCGGTAAACTGATCCAGCTGATGAACGAAACCGTTGACGGCGACTACCAGACCTTCAAATCGAAAGATGGTGCGTACGTTCGTGAACACTTCTTCGGTAAATATCCTGAAACCGCAGCACTGGTTGCAGACTGGACTGACGAGCAGATCTGGGCACTGAACCGTGGTGGTCACGATCCGAAGAAAATCTACGCTGCATTCAAGAAAGCGCAGGAAACCAAAGGCAAAGCGACAGTAATCCTTGCTCATACCATTAAAGGTTACGGCATGGGCGACGCGGCTGAAGGTAAAAACATCGCGCACCAGGTTAAGAAAATGAACATGGACGGTGTGCGTCATATCCGCGACCGTTTCAATGTGCCGGTGTCTGATGCAGATATCGAAAAACTGCCGTACATCACCTTCCCGGAAGGTTCTGAAGAGCATACCTATCTGCACGCTCAGCGTCAGAAACTGCACGGTTATCTGCCAAGCCGTCAGCCGAACTTCACCGAGAAGCTTGAGCTGCCGAGCCTGCAAGACTTCGGCGCGCTGTTGGAAGAGCAGAGCAAAGAGATCTCTACCACTATCGCTTTCGTTCGTGCTCTGAACGTGATGCTGAAGAACAAGTCGATCAAAGATCGTCTGGTACCGATCATCGCCGACGAAGCGCGTACTTTCGGTATGGAAGGTCTGTTCCGTCAGATTGGTATTTACAGCCCGAACGGTCAGCAGTACACCCCGCAGGACCGCGAGCAGGTTGCTTACTATAAAGAAGACGAGAAAGGTCAGATTCTGCAGGAAGGGATCAACGAGCTGGGCGCAGGTTGTTCCTGGCTGGCAGCGGCGACCTCTTACAGCACCAACAATCTGCCGATGATCCCGTTCTACATCTATTACTCGATGTTCGGCTTCCAGCGTATTGGCGATCTGTGCTGGGCGGCTGGCGACCAGCAAGCGCGTGGCTTCCTGATCGGCGGTACTTCCGGTCGTACCACCCTGAACGGCGAAGGTCTGCAGCACGAAGATGGTCACAGCCACATTCAGTCGCTGACTATCCCGAACTGTATCTCTTACGACCCGGCTTACGCTTACGAAGTTGCTGTCATCATGCATGACGGTCTGGAGCGTATGTACGGTGAAAAACAAGAGAACGTTTACTACTACATCACTACGCTGAACGAAAACTACCACATGCCGGCAATGCCGGAAGGTGCTGAGGAAGGTATCCGTAAAGGTATCTACAAACTCGAAACTATTGAAGGTAGCAAAGGTAAAGTTCAGCTGCTCGGCTCCGGTTCTATCCTGCGTCACGTCCGTGAAGCAGCTGAGATCCTGGCGAAAGATTACGGCGTAGGTTCTGACGTTTATAGCGTGACCTCCTTCACCGAGCTGGCGCGTGATGGTCAGGATTGTGAACGCTGGAACATGCTGCACCCGCTGGAAACTCCGCGCGTTCCGTATATCGCTCAGGTGATGAACGACGCTCCGGCAGTGGCATCTACCGACTATATGAAACTGTTCGCTGAGCAGGTCCGTACTTACGTACCGGCTGACGACTACCGCGTACTGGGTACTGATGGCTTCGGTCGTTCCGACAGCCGTGAGAACCTGCGTCACCACTTCGAAGTTGATGCTTCTTATGTCGTGGTTGCGGCGCTGGGCGAACTGGCTAAACGTGGCGAAATCGATAAGAAAGTGGTTGCTGACGCAATCGCCAAATTCAACATCGATGCAGATAAAGTTAACCCGCGTCTGGCGTAA", - "dna_sequence_length": 2664, - "functions": [ - "pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding" - ], - "id": "CDS_110", - "location": [ - [ - "NC_000913", - 123017, - "+", - 2664 - ] - ], - "md5": "f81fc7d70ff91a73966ab714f720cdec", - "parent_gene": "", - "protein_md5": "6661e42b76599483a127a1fe3c7d0752", - "protein_translation": "MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEARKGGVNVAAGTGISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHTIKGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHTYLHAQRQKLHGYLPSRQPNFTEKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEKQENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVREAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGELAKRGEIDKKVVADAIAKFNIDADKVNPRLA", - "protein_translation_length": 887, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0115" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06959" - ], - [ - "gene_synonym", - "GI:16128108" - ], - [ - "gene_synonym", - "aceF" - ], - [ - "gene_synonym", - "ASAP:ABE-0000400" - ], - [ - "gene_synonym", - "JW0111" - ], - [ - "gene_synonym", - "EcoGene:EG10025" - ], - [ - "gene_synonym", - "GeneID:944794" - ], - [ - "gene_synonym", - "ECK0114" - ], - [ - "gene_synonym", - "NP_414657.1" - ] - ], - "dna_sequence": "ATGGCTATCGAAATCAAAGTACCGGACATCGGGGCTGATGAAGTTGAAATCACCGAGATCCTGGTCAAAGTGGGCGACAAAGTTGAAGCCGAACAGTCGCTGATCACCGTAGAAGGCGACAAAGCCTCTATGGAAGTTCCGTCTCCGCAGGCGGGTATCGTTAAAGAGATCAAAGTCTCTGTTGGCGATAAAACCCAGACCGGCGCACTGATTATGATTTTCGATTCCGCCGACGGTGCAGCAGACGCTGCACCTGCTCAGGCAGAAGAGAAGAAAGAAGCAGCTCCGGCAGCAGCACCAGCGGCTGCGGCGGCAAAAGACGTTAACGTTCCGGATATCGGCAGCGACGAAGTTGAAGTGACCGAAATCCTGGTGAAAGTTGGCGATAAAGTTGAAGCTGAACAGTCGCTGATCACCGTAGAAGGCGACAAGGCTTCTATGGAAGTTCCGGCTCCGTTTGCTGGCACCGTGAAAGAGATCAAAGTGAACGTGGGTGACAAAGTGTCTACCGGCTCGCTGATTATGGTCTTCGAAGTCGCGGGTGAAGCAGGCGCGGCAGCTCCGGCCGCTAAACAGGAAGCAGCTCCGGCAGCGGCCCCTGCACCAGCGGCTGGCGTGAAAGAAGTTAACGTTCCGGATATCGGCGGTGACGAAGTTGAAGTGACTGAAGTGATGGTGAAAGTGGGCGACAAAGTTGCCGCTGAACAGTCACTGATCACCGTAGAAGGCGACAAAGCTTCTATGGAAGTTCCGGCGCCGTTTGCAGGCGTCGTGAAGGAACTGAAAGTCAACGTTGGCGATAAAGTGAAAACTGGCTCGCTGATTATGATCTTCGAAGTTGAAGGCGCAGCGCCTGCGGCAGCTCCTGCGAAACAGGAAGCGGCAGCGCCGGCACCGGCAGCAAAAGCTGAAGCCCCGGCAGCAGCACCAGCTGCGAAAGCGGAAGGCAAATCTGAATTTGCTGAAAACGACGCTTATGTTCACGCGACTCCGCTGATCCGCCGTCTGGCACGCGAGTTTGGTGTTAACCTTGCGAAAGTGAAGGGCACTGGCCGTAAAGGTCGTATCCTGCGCGAAGACGTTCAGGCTTACGTGAAAGAAGCTATCAAACGTGCAGAAGCAGCTCCGGCAGCGACTGGCGGTGGTATCCCTGGCATGCTGCCGTGGCCGAAGGTGGACTTCAGCAAGTTTGGTGAAATCGAAGAAGTGGAACTGGGCCGCATCCAGAAAATCTCTGGTGCGAACCTGAGCCGTAACTGGGTAATGATCCCGCATGTTACTCACTTCGACAAAACCGATATCACCGAGTTGGAAGCGTTCCGTAAACAGCAGAACGAAGAAGCGGCGAAACGTAAGCTGGATGTGAAGATCACCCCGGTTGTCTTCATCATGAAAGCCGTTGCTGCAGCTCTTGAGCAGATGCCTCGCTTCAATAGTTCGCTGTCGGAAGACGGTCAGCGTCTGACCCTGAAGAAATACATCAACATCGGTGTGGCGGTGGATACCCCGAACGGTCTGGTTGTTCCGGTATTCAAAGACGTCAACAAGAAAGGCATCATCGAGCTGTCTCGCGAGCTGATGACTATTTCTAAGAAAGCGCGTGACGGTAAGCTGACTGCGGGCGAAATGCAGGGCGGTTGCTTCACCATCTCCAGCATCGGCGGCCTGGGTACTACCCACTTCGCGCCGATTGTGAACGCGCCGGAAGTGGCTATCCTCGGCGTTTCCAAGTCCGCGATGGAGCCGGTGTGGAATGGTAAAGAGTTCGTGCCGCGTCTGATGCTGCCGATTTCTCTCTCCTTCGACCACCGCGTGATCGACGGTGCTGATGGTGCCCGTTTCATTACCATCATTAACAACACGCTGTCTGACATTCGCCGTCTGGTGATGTAA", - "dna_sequence_length": 1893, - "functions": [ - "pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2" - ], - "id": "CDS_111", - "location": [ - [ - "NC_000913", - 125695, - "+", - 1893 - ] - ], - "md5": "4e77faef4403e2421f715fcc925c2fb9", - "parent_gene": "", - "protein_md5": "71a490c733e5f9df7d3b5b5c0a876a35", - "protein_translation": "MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGIVKEIKVSVGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAAAAAKDVNVPDIGSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEIKVNVGDKVSTGSLIMVFEVAGEAGAAAPAAKQEAAPAAAPAPAAGVKEVNVPDIGGDEVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIRRLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGGGIPGMLPWPKVDFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITELEAFRKQQNEEAAKRKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVVPVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVNAPEVAILGVSKSAMEPVWNGKEFVPRLMLPISLSFDHRVIDGADGARFITIINNTLSDIRRLVM", - "protein_translation_length": 630, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "lpd" - ], - [ - "gene_synonym", - "GeneID:944854" - ], - [ - "gene_synonym", - "NP_414658.1" - ], - [ - "gene_synonym", - "b0116" - ], - [ - "gene_synonym", - "lpdA" - ], - [ - "gene_synonym", - "GI:16128109" - ], - [ - "gene_synonym", - "EcoGene:EG10543" - ], - [ - "gene_synonym", - "dhl" - ], - [ - "gene_synonym", - "ASAP:ABE-0000404" - ], - [ - "gene_synonym", - "JW0112" - ], - [ - "gene_synonym", - "ECK0115" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9P0" - ] - ], - "dna_sequence": "ATGAGTACTGAAATCAAAACTCAGGTCGTGGTACTTGGGGCAGGCCCCGCAGGTTACTCCGCTGCCTTCCGTTGCGCTGATTTAGGTCTGGAAACCGTAATCGTAGAACGTTACAACACCCTTGGCGGTGTTTGCCTGAACGTCGGCTGTATCCCTTCTAAAGCACTGCTGCACGTAGCAAAAGTTATCGAAGAAGCCAAAGCGCTGGCTGAACACGGTATCGTCTTCGGCGAACCGAAAACCGATATCGACAAGATTCGTACCTGGAAAGAGAAAGTGATCAATCAGCTGACCGGTGGTCTGGCTGGTATGGCGAAAGGCCGCAAAGTCAAAGTGGTCAACGGTCTGGGTAAATTCACCGGGGCTAACACCCTGGAAGTTGAAGGTGAGAACGGCAAAACCGTGATCAACTTCGACAACGCGATCATTGCAGCGGGTTCTCGCCCGATCCAACTGCCGTTTATTCCGCATGAAGATCCGCGTATCTGGGACTCCACTGACGCGCTGGAACTGAAAGAAGTACCAGAACGCCTGCTGGTAATGGGTGGCGGTATCATCGGTCTGGAAATGGGCACCGTTTACCACGCGCTGGGTTCACAGATTGACGTGGTTGAAATGTTCGACCAGGTTATCCCGGCAGCTGACAAAGACATCGTTAAAGTCTTCACCAAGCGTATCAGCAAGAAATTCAACCTGATGCTGGAAACCAAAGTTACCGCCGTTGAAGCGAAAGAAGACGGCATTTATGTGACGATGGAAGGCAAAAAAGCACCCGCTGAACCGCAGCGTTACGACGCCGTGCTGGTAGCGATTGGTCGTGTGCCGAACGGTAAAAACCTCGACGCAGGCAAAGCAGGCGTGGAAGTTGACGACCGTGGTTTCATCCGCGTTGACAAACAGCTGCGTACCAACGTACCGCACATCTTTGCTATCGGCGATATCGTCGGTCAACCGATGCTGGCACACAAAGGTGTTCACGAAGGTCACGTTGCCGCTGAAGTTATCGCCGGTAAGAAACACTACTTCGATCCGAAAGTTATCCCGTCCATCGCCTATACCGAACCAGAAGTTGCATGGGTGGGTCTGACTGAGAAAGAAGCGAAAGAGAAAGGCATCAGCTATGAAACCGCCACCTTCCCGTGGGCTGCTTCTGGTCGTGCTATCGCTTCCGACTGCGCAGACGGTATGACCAAGCTGATTTTCGACAAAGAATCTCACCGTGTGATCGGTGGTGCGATTGTCGGTACTAACGGCGGCGAGCTGCTGGGTGAAATCGGCCTGGCAATCGAAATGGGTTGTGATGCTGAAGACATCGCACTGACCATCCACGCGCACCCGACTCTGCACGAGTCTGTGGGCCTGGCGGCAGAAGTGTTCGAAGGTAGCATTACCGACCTGCCGAACCCGAAAGCGAAGAAGAAGTAA", - "dna_sequence_length": 1425, - "functions": [ - "dihydrolipoyl dehydrogenase", - "E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes", - "glycine cleavage system L protein", - "dihydrolipoamide dehydrogenase" - ], - "id": "CDS_112", - "location": [ - [ - "NC_000913", - 127912, - "+", - 1425 - ] - ], - "md5": "6d14d57ad1258e42e8290a992d0d6010", - "parent_gene": "", - "protein_md5": "631f444eb319baaf657cb7836d934fa5", - "protein_translation": "MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKK", - "protein_translation_length": 474, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000406" - ], - [ - "gene_synonym", - "GI:16128110" - ], - [ - "gene_synonym", - "b0117" - ], - [ - "gene_synonym", - "NP_414659.1" - ], - [ - "gene_synonym", - "EcoGene:EG12315" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36682" - ], - [ - "gene_synonym", - "JW0113" - ], - [ - "gene_synonym", - "ECK0116" - ], - [ - "gene_synonym", - "yacH" - ], - [ - "gene_synonym", - "GeneID:944868" - ] - ], - "dna_sequence": "ATGAAAATGACTTTGCCGTTTAAACCCCATGTGCTGGCGCTAATTTGCAGTGCCGGGCTTTGTGCCGCCTCTACCGGGCTATATATAAAAAGCCGCACAGTGGAAGCGCCTGTGGAACCGCAATCGACACAACTGGCTGTGTCTGACGCTGCCGCGGTTACGTTTCCTGCAACGGTTTCCGCACCTCCCGTAACACCCGCCGTCGTCAAATCCGCATTCAGCACTGCACAAATAGATCAATGGGTCGCGCCCGTCGCGCTGTATCCCGACGCCCTACTTTCGCAGGTGCTGATGGCATCAACCTATCCGACAAACGTTGCTCAAGCAGTGCAATGGTCGCACGATAATCCACTTAAACAAGGCGATGCTGCTATTCAGGCGGTATCTGACCAGCCGTGGGACGCCAGCGTTAAATCACTGGTGGCCTTTCCACAATTGATGGCATTGATGGGCGAAAACCCGCAATGGGTGCAAAACCTGGGCGATGCTTTTCTGGCCCAGCCGCAGGACGTGATGGACTCGGTACAGCGATTGCGGCAACTGGCGCAACAAACCGGCTCGCTGAAGTCATCAACCGAACAGAAAGTTATTACCACAACGAAGAAAGCTGTACCGGTAAAACAGACAGTCACGGCACCCGTCATACCATCCAATACAGTTTTAACTGCCAACCCCGTCATTACAGAGCCGGCAACAACCGTCATTTCCATTGAGCCCGCCAATCCTGATGTGGTCTATATTCCCAACTACAACCCAACCGTGGTTTACGGGAACTGGGCCAATACTGCGTATCCGCCGGTTTATCTGCCACCACCAGCCGGAGAACCGTTTGTTGACAGCTTTGTACGCGGATTCGGCTATAGCATGGGCGTTGCTACCACGTACGCACTATTCAGCAGCATCGACTGGGACGACGACGATCATGACCATCATCATCATGACAATGATGATTATCATCACCACGATGGCGGTCATCGTGACGGTAATGGCTGGCAACACAACGGCGACAACATCAATATCGACGTCAACAATTTCAACCGTATCACCGGTGAGCATCTTACTGATAAGAATATGGCATGGCGGCACAATCCAAACTACCGTAATGGTGTGCCCTATCATGATCAGGATATGGCAAAGCGGTTTCATCAAACCGATGTCAACGGCGGAATGAGCGCCACGCAATTACCTGCCCCAACGCGCGACAGCCAGCGTCAGGCGGCAGCAAATCAGTTTCAGCAACGAACACACGCCGCACCAGTCATTACACGAGATACCCAACGTCAGGCAGCGGCACAGCGGTTTAATGAAGCTGAACACTATGGGAGCTATGACGACTTCCACGACTTCAGCCGTCGCCAACCACTGACCCAGCAACAAAAGGACGCCGCTCGTCAGCGTTATCAGTCCGCCTCGCCTGAGCAGCGCCAGGCAGTTCGCGAGAGAATGCAGACTAACCCGAAGATCCAGCAGCGAAGAGAGGCAGCGCGTGAGCGCATTCAGTCCGCCTCGCCTGAGCAGCGCCAGGCGGTTCGCGAGAAAATGCAGACTAACCCGCAGAACCAGCAGCGAAGAGACGCAGCGCGTGAGCGTATTCAGTCCGCATCACCAGAGCAGCGCCAGGTGTTTAAGGAAAAAGTACAGCAGCGCCCACTGAATCAACAGCAACGTGATAACGCCCGCCAGCGTGTTCAATCGGCATCACCTGAACAACGTCAGGTTTTTCGGGAGAAAGTTCAGGAGAGCCGCCCACAACGTCTAAACGACAGTAACCATACTGTCAGGCTGAATAACGAGCAACGGTCAGCAGTATGCGAACGTCTCTCTGAACGTGGAGCAAGAAGACTGGAAAGGTAA", 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"aliases": [ - [ - "gene_synonym", - "b0118" - ], - [ - "gene_synonym", - "GI:16128111" - ], - [ - "gene_synonym", - "NP_414660.1" - ], - [ - "gene_synonym", - "acnB" - ], - [ - "gene_synonym", - "GeneID:944864" - ], - [ - "gene_synonym", - "EcoGene:EG12316" - ], - [ - "gene_synonym", - "JW0114" - ], - [ - "gene_synonym", - "ASAP:ABE-0000411" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36683" - ], - [ - "gene_synonym", - "yacJ" - ], - [ - "gene_synonym", - "ECK0117" - ], - [ - "gene_synonym", - "yacI" - ] - ], - "dna_sequence": "GTGCTAGAAGAATACCGTAAGCACGTAGCTGAGCGTGCCGCTGAGGGGATTGCGCCCAAACCCCTGGATGCAAACCAAATGGCCGCACTTGTAGAGCTGCTGAAAAACCCGCCCGCGGGCGAAGAAGAATTCCTGTTAGATCTGTTAACCAACCGTGTTCCCCCAGGCGTCGATGAAGCCGCCTATGTCAAAGCAGGCTTCCTGGCTGCTATCGCGAAAGGCGAAGCCAAATCCCCTCTGCTGACTCCGGAAAAAGCCATCGAACTGCTGGGCACCATGCAGGGTGGTTACAACATTCATCCGCTGATCGACGCGCTGGATGATGCCAAACTGGCACCTATTGCTGCCAAAGCACTTTCTCACACGCTGCTGATGTTCGATAACTTCTATGACGTAGAAGAGAAAGCGAAAGCAGGCAACGAATATGCGAAGCAGGTTATGCAGTCCTGGGCGGATGCCGAATGGTTCCTGAATCGCCCGGCGCTGGCTGAAAAACTGACCGTTACTGTCTTCAAAGTCACTGGCGAAACTAACACCGATGACCTTTCTCCGGCACCGGATGCGTGGTCACGCCCGGATATCCCACTGCACGCGCTGGCGATGCTGAAAAACGCCCGTGAAGGTATTGAGCCAGACCAGCCTGGTGTTGTTGGTCCGATCAAGCAAATCGAAGCTCTGCAACAGAAAGGTTTCCCGCTGGCGTACGTCGGTGACGTTGTGGGTACGGGTTCTTCGCGTAAATCCGCCACTAACTCCGTTCTGTGGTTTATGGGCGATGATATTCCACATGTGCCGAACAAACGCGGCGGTGGTTTGTGCCTCGGCGGTAAAATTGCACCCATCTTCTTTAACACGATGGAAGACGCGGGTGCACTGCCAATCGAAGTCGACGTCTCTAACCTGAACATGGGCGACGTGATTGACGTTTACCCGTACAAAGGTGAAGTGCGTAACCACGAAACCGGCGAACTGCTGGCGACCTTCGAACTGAAAACCGACGTGCTGATTGATGAAGTGCGTGCTGGTGGCCGTATTCCGCTGATTATCGGGCGTGGCCTGACCACCAAAGCGCGTGAAGCACTTGGTCTGCCGCACAGTGATGTGTTCCGTCAGGCGAAAGATGTCGCTGAGAGCGATCGCGGCTTCTCGCTGGCGCAAAAAATGGTAGGCCGTGCCTGTGGCGTGAAAGGCATTCGTCCGGGCGCGTACTGTGAACCGAAAATGACTTCTGTAGGTTCCCAGGACACCACCGGCCCGATGACCCGTGATGAACTGAAAGACCTGGCGTGCCTGGGCTTCTCGGCTGACCTGGTGATGCAGTCTTTCTGCCACACCGCGGCGTATCCGAAGCCAGTTGACGTGAACACGCACCACACGCTGCCGGACTTCATTATGAACCGTGGCGGTGTGTCGCTGCGTCCGGGTGACGGCGTCATTCACTCCTGGCTGAACCGTATGCTGCTGCCGGATACCGTCGGTACCGGTGGTGACTCCCATACCCGTTTCCCGATCGGTATCTCTTTCCCGGCGGGTTCTGGTCTGGTGGCGTTTGCTGCCGCAACTGGCGTAATGCCGCTTGATATGCCGGAATCCGTTCTGGTGCGCTTCAAAGGCAAAATGCAGCCGGGCATCACCCTGCGCGATCTGGTACACGCTATTCCGCTGTATGCGATCAAACAAGGTCTGCTGACCGTTGAGAAGAAAGGCAAGAAAAACATCTTCTCTGGCCGCATCCTGGAAATTGAAGGTCTGCCGGATCTGAAAGTTGAGCAGGCCTTTGAGCTAACCGATGCGTCCGCCGAGCGTTCTGCCGCTGGTTGTACCATCAAGCTGAACAAAGAACCGATCATCGAATACCTGAACTCTAACATCGTCCTGCTGAAGTGGATGATCGCGGAAGGTTACGGCGATCGTCGTACCCTGGAACGTCGTATTCAGGGCATGGAAAAATGGCTGGCGAATCCTGAGCTGCTGGAAGCCGATGCAGATGCGGAATACGCGGCAGTGATCGACATCGATCTGGCGGATATTAAAGAGCCAATCCTGTGTGCTCCGAACGACCCGGATGACGCGCGTCCGCTGTCTGCGGTACAGGGTGAGAAGATCGACGAAGTGTTTATCGGTTCCTGCATGACCAACATCGGTCACTTCCGTGCTGCGGGTAAACTGCTGGATGCGCATAAAGGTCAGTTGCCGACCCGCCTGTGGGTGGCACCGCCAACCCGTATGGACGCCGCACAGTTGACCGAAGAAGGCTACTACAGCGTCTTCGGTAAGAGTGGTGCGCGTATCGAGATCCCTGGCTGTTCCCTGTGTATGGGTAACCAGGCGCGTGTGGCGGACGGTGCAACGGTGGTTTCCACCTCTACCCGTAACTTCCCGAACCGTCTGGGTACTGGCGCGAATGTCTTCCTGGCTTCTGCGGAACTGGCGGCTGTTGCGGCGCTGATTGGCAAACTGCCGACGCCGGAAGAGTACCAGACCTACGTGGCGCAGGTAGATAAAACAGCCGTTGATACTTACCGTTATCTGAACTTCAACCAGCTTTCTCAGTACACCGAGAAAGCCGATGGGGTGATTTTCCAGACTGCGGTTTAA", 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"MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEFLLDLLTNRVPPGVDEAAYVKAGFLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPLIDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRPALAEKLTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVGPIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGGKIAPIFFNTMEDAGALPIEVDVSNLNMGDVIDVYPYKGEVRNHETGELLATFELKTDVLIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESDRGFSLAQKMVGRACGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVEKKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNIVLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLADIKEPILCAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDAHKGQLPTRLWVAPPTRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLGTGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDTYRYLNFNQLSQYTEKADGVIFQTAV", - "protein_translation_length": 865, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111086" - ], - [ - "gene_synonym", - "b0119" - ], - [ - "gene_synonym", - "GeneID:944809" - ], - [ - "gene_synonym", - "NP_414661.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8E5" - ], - [ - "gene_synonym", - "JW0115" - ], - [ - "gene_synonym", - "EcoGene:EG12605" - ], - [ - "gene_synonym", - "ECK0118" - ], - [ - "gene_synonym", - "ASAP:ABE-0000414" - ], - [ - "gene_synonym", - "yacL" - ] - ], - "dna_sequence": "ATGGATTACGAATTTCTGCGCGATATTACCGGAGTGGTAAAGGTGCGTATGTCCATGGGGCATGAAGTGGTCGGGCACTGGTTTAATGAAGAGGTGAAAGAAAACCTGGCCTTGCTTGATGAAGTGGAACAAGCAGCGCACGCACTGAAAGGTAGCGAACGGTCCTGGCAACGGGCAGGGCATGAATACACCCTGTGGATGGACGGTGAAGAGGTGATGGTTCGCGCCAATCAACTGGAATTCGCTGGCGATGAAATGGAAGAGGGGATGAACTACTACGACGAAGAAAGCCTGTCGCTATGCGGCGTTGAGGATTTTCTGCAGGTCGTGGCGGCTTACCGCAATTTCGTGCAGCAGAAGTAA", - "dna_sequence_length": 363, - "functions": [ - "UPF0231 family protein" - ], - "id": "CDS_115", - "location": [ - [ - "NC_000913", - 134388, - "+", - 363 - ] - ], - "md5": "ce0985d1b27ebed07a604a60727d2b4c", - "parent_gene": "", - "protein_md5": "6b38f5ed43a61eea2ece7fb07abb5f4c", - "protein_translation": "MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQAAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCGVEDFLQVVAAYRNFVQQK", - "protein_translation_length": 120, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10962" - ], - [ - "gene_synonym", - "GI:16128113" - ], - [ - "gene_synonym", - "JW0116" - ], - [ - "gene_synonym", - "b0120" - ], - [ - "gene_synonym", - "ASAP:ABE-0000416" - ], - [ - "gene_synonym", - "ECK0119" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7F6" - ], - [ - "gene_synonym", - "speD" - ], - [ - "gene_synonym", - "GeneID:947719" - ], - [ - "gene_synonym", - "NP_414662.1" - ] - ], - "dna_sequence": "TTGAAAAAACTGAAACTGCATGGCTTTAATAATCTGACCAAAAGTCTGAGTTTTTGTATTTACGATATCTGCTACGCCAAAACTGCCGAAGAGCGCGACGGTTATATTGCTTATATCGATGAACTCTATAATGCCAACCGTCTGACCGAAATCCTGTCAGAAACCTGTTCCATTATCGGGGCTAATATTCTTAACATCGCCCGCCAGGATTACGAACCACAGGGTGCCAGCGTCACTATTCTGGTGAGTGAAGAACCGGTTGACCCGAAACTCATCGACAAAACAGAACACCCCGGCCCACTGCCAGAAACGGTCGTTGCCCATCTTGATAAAAGTCATATTTGCGTACATACCTACCCGGAAAGTCATCCTGAAGGCGGTTTATGTACCTTCCGCGCCGATATTGAAGTCTCTACCTGCGGCGTGATTTCTCCGCTGAAGGCGCTGAATTACCTGATCCACCAGCTTGAGTCCGATATCGTAACCATTGATTATCGCGTGCGCGGTTTTACCCGCGACATTAACGGTATGAAGCACTTTATCGACCATGAGATTAATTCGATTCAGAACTTTATGTCTGACGATATGAAGGCGCTGTATGACATGGTGGATGTGAACGTCTATCAGGAAAATATCTTCCATACCAAGATGTTGCTTAAAGAGTTCGACCTTAAGCACTACATGTTCCACACCAAACCGGAAGACTTAACCGACAGCGAGCGCCAGGAAATTACCGCTGCGCTGTGGAAAGAAATGCGCGAGATTTATTACGGGCGCAATATGCCAGCTGTTTAA", - "dna_sequence_length": 795, - "functions": [ - "S-adenosylmethionine decarboxylase" - ], - "id": "CDS_116", - "location": [ - [ - "NC_000913", - 135582, - "-", - 795 - ] - ], - "md5": "c819242206274a8bfd4ed8dd4b7f711f", - "parent_gene": "", - "protein_md5": "48e7bddb5dbed6b3c40a806bdcf3efd5", - "protein_translation": "MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLPETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDIVTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV", - "protein_translation_length": 264, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10963" - ], - [ - "gene_synonym", - "NP_414663.1" - ], - [ - "gene_synonym", - "GI:16128114" - ], - [ - "gene_synonym", - "GeneID:947726" - ], - [ - "gene_synonym", - "ASAP:ABE-0000418" - ], - [ - "gene_synonym", - "JW0117" - ], - [ - "gene_synonym", - "b0121" - ], - [ - "gene_synonym", - "ECK0120" - ], - [ - "gene_synonym", - "speE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09158" - ] - ], - "dna_sequence": "ATGGCCGAAAAAAAACAGTGGCATGAAACGCTACACGACCAGTTTGGGCAGTACTTTGCGGTAGATAACGTTCTGTATCATGAAAAGACCGATCACCAGGATCTGATCATTTTTGAGAACGCTGCATTTGGTCGCGTAATGGCGCTGGATGGCGTAGTACAAACCACCGAGCGCGACGAGTTTATCTATCATGAGATGATGACCCATGTTCCGCTACTGGCCCATGGTCACGCGAAACATGTGCTGATTATCGGCGGCGGCGACGGTGCCATGCTGCGTGAAGTAACCCGACATAAAAACGTTGAGTCAATCACGATGGTGGAAATCGATGCGGGTGTCGTATCGTTCTGCCGTCAGTATCTACCCAACCATAACGCCGGTAGCTACGACGATCCGCGCTTTAAGCTGGTGATCGACGATGGCGTCAATTTCGTTAATCAAACCAGCCAGACCTTTGATGTCATTATCTCCGACTGCACCGATCCTATCGGTCCCGGCGAAAGCCTTTTCACTTCGGCATTTTATGAAGGCTGCAAACGTTGCCTGAATCCTGGCGGTATCTTCGTCGCACAAAACGGCGTCTGCTTTTTACAGCAGGAAGAAGCCATCGACAGCCATCGCAAACTCAGCCATTACTTCAGCGACGTTGGCTTTTATCAGGCGGCGATCCCGACCTATTACGGCGGTATCATGACTTTTGCATGGGCGACAGATAACGACGCCTTACGCCATCTCTCAACCGAAATTATTCAGGCGCGTTTTCTCGCCTCTGGCCTGAAATGCCGTTATTACAATCCGGCAATCCATACGGCAGCTTTTGCCTTACCTCAGTATCTGCAAGACGCACTGGCTTCACAGCCGTCCTAA", - "dna_sequence_length": 867, - "functions": [ - "spermidine synthase (putrescine aminopropyltransferase)" - ], - "id": "CDS_117", - "location": [ - [ - "NC_000913", - 136464, - "-", - 867 - ] - ], - "md5": "fe3acadf4ebab73002ae1624751b8710", - "parent_gene": "", - "protein_md5": "1c4eb8da7d0ef9335ecc32a9284914d4", - "protein_translation": "MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALPQYLQDALASQPS", - "protein_translation_length": 288, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111087" - ], - [ - "gene_synonym", - "NP_414664.4" - ], - [ - "gene_synonym", - "b0122" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA95" - ], - [ - "gene_synonym", - "yacC" - ], - [ - "gene_synonym", - "gspS" - ], - [ - "gene_synonym", - "EcoGene:EG11089" - ], - [ - "gene_synonym", - "ASAP:ABE-0000423" - ], - [ - "gene_synonym", - "ECK0121" - ], - [ - "gene_synonym", - "GeneID:948472" - ], - [ - "gene_synonym", - "JW0118" - ] - ], - "dna_sequence": "ATGAAGACGTTTTTCAGAACAGTGTTATTCGGCAGCCTGATGGCCGTCTGCGCAAACAGTTACGCGCTCAGCGAGTCTGAAGCCGAAGATATGGCCGATTTAACGGCAGTTTTTGTCTTTCTGAAGAACGATTGTGGTTACCAGAACTTACCTAACGGGCAAATTCGTCGCGCACTGGTCTTTTTCGCTCAGCAAAACCAGTGGGACCTCAGTAATTACGACACCTTCGACATGAAAGCCCTCGGTGAAGACAGCTACCGCGATCTCAGCGGCATTGGCATTCCCGTCGCTAAAAAATGCAAAGCCCTGGCCCGCGATTCCTTAAGCCTGCTTGCCTACGTCAAATAA", - "dna_sequence_length": 348, - "functions": [ - "PulS_OutS family protein" - ], - "id": "CDS_118", - "location": [ - [ - "NC_000913", - 136917, - "-", - 348 - ] - ], - "md5": "4d4db90766d48691b2f918ad9727c123", - "parent_gene": "", - "protein_md5": "e1f11b794d647462366a094eeaf6a8b8", - "protein_translation": "MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK", - "protein_translation_length": 115, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128116" - ], - [ - "gene_synonym", - "b0123" - ], - [ - "gene_synonym", - "NP_414665.1" - ], - [ - "gene_synonym", - "yacK" - ], - [ - "gene_synonym", - "ECK0122" - ], - [ - "gene_synonym", - "cuiD" - ], - [ - "gene_synonym", - "cueO" - ], - [ - "gene_synonym", - "ASAP:ABE-0000430" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36649" - ], - [ - "gene_synonym", - "JW0119" - ], - [ - "gene_synonym", - "EcoGene:EG12318" - ], - [ - "gene_synonym", - "GeneID:947736" - ] - ], - "dna_sequence": "ATGCAACGTCGTGATTTCTTAAAATATTCCGTCGCGCTGGGTGTGGCTTCGGCTTTGCCGCTGTGGAGCCGCGCAGTATTTGCGGCAGAACGCCCAACGTTACCGATCCCTGATTTGCTCACGACCGATGCCCGTAATCGCATTCAGTTAACTATTGGCGCAGGCCAGTCCACCTTTGGCGGGAAAACTGCAACTACCTGGGGCTATAACGGCAATCTGCTGGGGCCGGCGGTGAAATTACAGCGCGGCAAAGCGGTAACGGTTGATATCTACAACCAACTGACGGAAGAGACAACGTTGCACTGGCACGGGCTGGAAGTACCGGGTGAAGTCGACGGCGGCCCGCAGGGAATTATTCCGCCAGGTGGCAAGCGCTCGGTGACGTTGAACGTTGATCAACCTGCCGCTACCTGCTGGTTCCATCCGCATCAGCACGGCAAAACCGGGCGACAGGTGGCGATGGGGCTGGCTGGGCTGGTGGTGATTGAAGATGACGAGATCCTGAAATTAATGCTGCCAAAACAGTGGGGTATCGATGATGTTCCGGTGATCGTTCAGGATAAGAAATTTAGCGCCGACGGGCAGATTGATTATCAACTGGATGTGATGACCGCCGCCGTGGGCTGGTTTGGCGATACGTTGCTGACCAACGGTGCAATCTACCCGCAACACGCTGCCCCGCGTGGTTGGCTGCGCCTGCGTTTGCTCAATGGCTGTAATGCCCGTTCGCTCAATTTCGCCACCAGCGACAATCGCCCGCTGTATGTGATTGCCAGCGACGGTGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCGCTGGAAGGGCTGACGGTACGCAAGCTGCAACTCTCTATGGACCCGATGCTCGATATGATGGGGATGCAGATGCTAATGGAGAAATATGGCGATCAGGCGATGGCCGGGATGGATCACAGCCAGATGATGGGCCATATGGGGCACGGCAATATGAATCATATGAACCACGGCGGGAAGTTCGATTTCCACCATGCCAACAAAATCAACGGTCAGGCGTTTGATATGAACAAGCCGATGTTTGCGGCGGCGAAAGGGCAATACGAACGTTGGGTTATCTCTGGCGTGGGCGACATGATGCTGCATCCGTTCCATATCCACGGCACGCAGTTCCGTATCTTGTCAGAAAATGGCAAACCGCCAGCGGCTCATCGCGCGGGCTGGAAAGATACCGTTAAGGTAGAAGGTAATGTCAGCGAAGTGCTGGTGAAGTTTAATCACGATGCACCGAAAGAACATGCTTATATGGCGCACTGCCATCTGCTGGAGCATGAAGATACGGGGATGATGTTAGGGTTTACGGTATAA", 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- "gene_synonym", - "gcd" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15877" - ], - [ - "gene_synonym", - "GeneID:944830" - ], - [ - "gene_synonym", - "b0124" - ], - [ - "gene_synonym", - "NP_414666.1" - ], - [ - "gene_synonym", - "EcoGene:EG10369" - ], - [ - "gene_synonym", - "ECK0123" - ], - [ - "gene_synonym", - "ASAP:ABE-0000433" - ] - ], - "dna_sequence": "ATGGCAATTAACAATACAGGCTCGCGACGATTACTCGTCACGCTAACAGCCCTTTTTGCAGCGCTTTGCGGGCTGTATCTACTCATTGGCGGAGGCTGGCTGGTCGCGATTGGCGGCTCCTGGTACTACCCTATCGCTGGCCTTGTGATGCTCGGCGTCGCCTGGATGCTGTGGCGCAGTAAACGCGCCGCGCTTTGGCTATACGCAGCCCTGCTGCTCGGCACCATGATTTGGGGCGTCTGGGAAGTTGGTTTCGACTTCTGGGCGCTGACTCCGCGCAGCGACATTCTGGTCTTCTTCGGCATCTGGCTGATCCTGCCGTTTGTCTGGCGTCGCCTGGTCATTCCTGCCAGCGGCGCAGTTGCCGCACTGGTGGTCGCACTGCTGATTAGCGGTGGTATCCTGACCTGGGCCGGATTTAACGATCCGCAGGAGATCAACGGCACCTTAAGCGCCGATGCCACACCTGCTGAAGCTATCTCCCCCGTAGCCGATCAGGACTGGCCTGCCTATGGTCGTAATCAGGAAGGTCAACGCTTTTCGCCGCTGAAACAAATTAACGCCGATAACGTCCATAATCTGAAAGAAGCCTGGGTGTTCCGTACTGGCGATGTGAAGCAGCCGAACGATCCGGGTGAAATCACCAATGAAGTGACGCCGATTAAAGTGGGCGACACCCTTTACCTGTGTACCGCTCACCAGCGCCTGTTTGCGCTTGATGCCGCCAGCGGCAAAGAGAAATGGCATTACGATCCTGAGCTGAAAACCAACGAGTCTTTCCAGCACGTAACCTGCCGTGGTGTCTCTTATCATGAAGCCAAAGCAGAAACCGCTTCGCCGGAAGTGATGGCGGATTGCCCGCGTCGTATCATTCTTCCGGTCAATGATGGTCGACTGATTGCGATTAACGCTGAAAACGGCAAACTGTGCGAAACCTTCGCCAATAAAGGCGTGCTCAATCTGCAAAGCAATATGCCAGACACCAAACCGGGTCTGTATGAACCGACTTCGCCACCGATTATCACCGATAAAACCATCGTGATGGCCGGTTCAGTTACCGATAACTTCTCAACCCGCGAAACGTCTGGCGTGATCCGTGGTTTTGATGTCAACACCGGGGAGCTGCTGTGGGCTTTTGATCCCGGCGCGAAAGATCCGAACGCAATCCCGTCTGACGAACACACCTTTACCTTTAACTCGCCAAACTCCTGGGCACCAGCGGCCTATGACGCGAAGCTGGATCTGGTCTATCTGCCGATGGGCGTGACCACGCCGGATATCTGGGGCGGTAACCGCACACCGGAACAGGAACGTTATGCCAGCTCGATTCTGGCGCTGAATGCCACTACCGGGAAACTGGCGTGGAGCTACCAGACCGTTCACCACGACCTGTGGGACATGGATCTTCCGGCACAGCCGACGCTGGCGGACATCACCGTTAATGGTCAGAAAGTGCCAGTTATTTACGCTCCGGCGAAAACCGGCAACATTTTTGTGCTCGATCGTCGTAATGGCGAACTGGTGGTTCCGGCACCGGAAAAACCGGTTCCCCAAGGTGCAGCGAAAGGCGATTACGTAACCCCAACTCAACCGTTTTCTGAACTGAGCTTCCGTCCGACGAAAGATTTGAGCGGTGCGGATATGTGGGGAGCCACCATGTTTGACCAACTGGTGTGCCGCGTGATGTTCCACCAGATGCGCTATGAAGGCATTTTCACCCCGCCATCTGAACAGGGTACGCTGGTCTTCCCGGGTAACCTGGGGATGTTCGAATGGGGCGGGATTTCCGTTGATCCAAATCGTGAAGTGGCGATTGCCAACCCAATGGCACTGCCGTTTGTTTCGAAACTGATCCCGCGTGGTCCTGGCAACCCGATGGAGCAGCCGAAAGATGCCAAAGGCACGGGTACGGAATCCGGCATTCAGCCACAGTACGGTGTACCGTATGGTGTCACGCTCAACCCGTTCCTCTCACCATTTGGTCTGCCATGTAAACAGCCAGCATGGGGTTATATCTCGGCGCTGGATCTGAAAACTAATGAAGTGGTGTGGAAGAAACGTATTGGTACGCCGCAGGACAGTATGCCGTTCCCGATGCCGGTTCCGGTGCCGTTCAATATGGGTATGCCGATGCTGGGCGGGCCAATCTCCACGGCGGGTAACGTGCTGTTTATCGCCGCTACGGCAGATAACTACCTGCGCGCTTACAACATGAGCAACGGTGAAAAACTGTGGCAGGGTCGTTTACCAGCGGGTGGTCAGGCTACGCCAATGACCTATGAAGTGAATGGTAAGCAGTATGTGGTGATCTCCGCAGGCGGTCACGGTTCATTTGGTACGAAGATGGGCGACTATATTGTGGCTTATGCGCTGCCGGATGATGTGAAGTAA", 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"MAINNTGSRRLLVTLTALFAALCGLYLLIGGGWLVAIGGSWYYPIAGLVMLGVAWMLWRSKRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGIWLILPFVWRRLVIPASGAVAALVVALLISGGILTWAGFNDPQEINGTLSADATPAEAISPVADQDWPAYGRNQEGQRFSPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEVTPIKVGDTLYLCTAHQRLFALDAASGKEKWHYDPELKTNESFQHVTCRGVSYHEAKAETASPEVMADCPRRIILPVNDGRLIAINAENGKLCETFANKGVLNLQSNMPDTKPGLYEPTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPSDEHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATTGKLAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELVVPAPEKPVPQGAAKGDYVTPTQPFSELSFRPTKDLSGADMWGATMFDQLVCRVMFHQMRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALPFVSKLIPRGPGNPMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEVVWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSNGEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGTKMGDYIVAYALPDDVK", - "protein_translation_length": 796, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5009" - ], - [ - "gene_synonym", - "EcoGene:EG20098" - ], - [ - "gene_synonym", - "GeneID:946624" - ], - [ - "gene_synonym", - "GI:90111088" - ], - [ - "gene_synonym", - "b0125" - ], - [ - "gene_synonym", - "ECK0124" - ], - [ - "gene_synonym", - "NP_414667.4" - ], - [ - "gene_synonym", - "hpt" - ], - [ - "gene_synonym", - "ASAP:ABE-0000440" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9M2" - ] - ], - "dna_sequence": "ATGAAACATACTGTAGAAGTAATGATCCCCGAAGCGGAGATTAAAGCGCGTATCGCCGAACTGGGTCGTCAGATTACTGAGCGTTACAAAGACAGCGGCAGCGATATGGTGCTGGTGGGTCTGCTGCGTGGCTCATTTATGTTTATGGCGGACCTGTGCCGTGAAGTTCAGGTATCTCATGAAGTCGACTTTATGACCGCCTCCAGCTACGGTAGCGGCATGTCCACCACCCGTGATGTGAAAATCCTCAAAGATCTGGATGAAGATATCCGTGGCAAGGACGTGCTGATTGTTGAAGATATCATCGACTCGGGGAATACACTGTCGAAAGTGCGTGAGATCTTAAGCCTGCGCGAACCGAAGTCGCTGGCGATTTGTACGCTGCTGGATAAACCGTCCCGTCGTGAAGTGAACGTCCCGGTAGAATTTATCGGTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAA", - "dna_sequence_length": 537, - "functions": [ - "hypoxanthine phosphoribosyltransferase" - ], - "id": "CDS_121", - "location": [ - [ - "NC_000913", - 141431, - "+", - 537 - ] - ], - "md5": "347c34122c6f5cec9a5f46151203600c", - "parent_gene": "", - "protein_md5": "83e24d1b011dea566c31f593927c9702", - "protein_translation": "MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDYAQRYRHLPYIGKVILLDE", - "protein_translation_length": 178, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0122" - ], - [ - "gene_synonym", - "GeneID:944832" - ], - [ - "gene_synonym", - "yadF" - ], - [ - "gene_synonym", - "ECK0125" - ], - [ - "gene_synonym", - "GI:16128119" - ], - [ - "gene_synonym", - "b0126" - ], - [ - "gene_synonym", - "NP_414668.1" - ], - [ - "gene_synonym", - "can" - ], - [ - "gene_synonym", - "EcoGene:EG12319" - ], - [ - "gene_synonym", - "ASAP:ABE-0000442" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P61517" - ] - ], - "dna_sequence": "ATGAAAGACATAGATACACTCATCAGCAACAATGCACTATGGTCAAAAATGCTGGTGGAAGAGGATCCCGGGTTTTTTGAGAAACTGGCACAAGCGCAAAAACCGCGCTTTCTATGGATTGGATGTTCCGACAGTCGCGTTCCTGCAGAACGTTTAACCGGTCTTGAGCCGGGCGAACTCTTTGTTCACCGTAATGTTGCTAACCTGGTCATTCACACTGACCTGAACTGCCTTTCCGTGGTTCAGTATGCAGTGGATGTACTCGAAGTTGAACACATTATTATCTGTGGCCACTACGGTTGCGGCGGCGTACAAGCCGCAGTTGAAAACCCGGAACTGGGGCTTATCAACAACTGGCTGCTGCATATCCGCGATATCTGGTTCAAACATAGCTCATTGCTCGGCGAAATGCCGCAAGAGCGCCGTCTGGATACCTTGTGTGAACTGAACGTCATGGAACAGGTGTATAACCTGGGCCACTCCACCATTATGCAATCAGCGTGGAAACGCGGGCAGAAAGTTACCATTCACGGCTGGGCCTACGGCATTCACGACGGCTTGCTGCGTGATCTGGATGTTACCGCCACCAACCGCGAAACCCTTGAGCAACGTTACCGTCACGGGATTTCCAACCTCAAGCTGAAACACGCCAACCACAAATAA", - "dna_sequence_length": 663, - "functions": [ - "carbonic anhydrase" - ], - "id": "CDS_122", - "location": [ - [ - "NC_000913", - 142670, - "-", - 663 - ] - ], - "md5": "e24080e36e9458b11a636aed11676261", - "parent_gene": "", - "protein_md5": "7a19fc763018cea7a941ca7feb7122bf", - "protein_translation": "MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELGLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHANHK", - "protein_translation_length": 220, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414669.1" - ], - [ - "gene_synonym", - "b0127" - ], - [ - "gene_synonym", - "yadG" - ], - [ - "gene_synonym", - "ECK0126" - ], - [ - "gene_synonym", - "JW0123" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36879" - ], - [ - "gene_synonym", - "ASAP:ABE-0000447" - ], - [ - "gene_synonym", - "GeneID:944833" - ], - [ - "gene_synonym", - "GI:16128120" - ], - [ - "gene_synonym", - "EcoGene:EG12320" - ] - ], - "dna_sequence": "ATGACCATTGCACTGGAACTTCAACAGCTTAAAAAAACCTATCCAGGCGGCGTTCAGGCGCTTCGTGGGATAGATTTGCAGGTCGAAGCGGGTGATTTTTATGCGCTTCTCGGGCCGAACGGGGCCGGGAAATCGACCACTATCGGTATTATCAGCTCTCTGGTAAATAAAACCTCCGGGCGGGTCAGCGTATTTGGTTACGATCTCGAGAAGGATGTCGTGAACGCTAAACGTCAGTTGGGACTGGTGCCGCAGGAATTTAACTTCAACCCGTTTGAAACCGTGCAGCAAATTGTGGTGAATCAGGCAGGGTACTACGGCGTGGAGCGCAAAGAAGCGTACATCCGCAGCGAAAAGTATCTTAAACAACTCGATCTATGGGGAAAACGCAACGAACGTGCGCGTATGTTATCTGGCGGGATGAAGCGCCGTTTAATGATTGCCCGTGCGTTAATGCATGAACCTAAACTACTGATTCTCGACGAACCGACCGCAGGCGTGGATATTGAACTTCGCCGCTCAATGTGGGGCTTTTTGAAGGATTTAAACGACAAAGGCACCACCATCATTCTCACCACACACTACCTGGAAGAAGCAGAAATGCTGTGCCGCAATATCGGCATTATTCAACACGGTGAGCTGGTGGAAAATACCTCGATGAAGGCGCTGCTGGCGAAGCTGAAATCGGAAACCTTTATTCTCGATCTCGCACCGAAAAGCCCGTTACCGAAGCTCGATGGCTATCAGTATCGACTGGTCGATACCGCGACGCTGGAAGTTGAAGTGCTGCGTGAGCAGGGGATCAACAGCGTATTTACGCAGTTAAGTGAGCAGGGCATTCAGGTATTAAGTATGCGTAACAAAGCTAACCGTCTGGAAGAGCTGTTTGTTTCACTGGTTAATGAAAAACAAGGAGATCGCGCATGA", - "dna_sequence_length": 927, - "functions": [ - "putative ABC transporter ATPase" - ], - "id": "CDS_123", - "location": [ - [ - "NC_000913", - 142779, - "+", - 927 - ] - ], - "md5": "daf0efb3ae733f8a6ccc21453a6e8fcd", - "parent_gene": "", - "protein_md5": "18acf8210d82c9f9aedc74c99466b051", - "protein_translation": "MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKLKSETFILDLAPKSPLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLSEQGIQVLSMRNKANRLEELFVSLVNEKQGDRA", - "protein_translation_length": 308, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yadH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFN6" - ], - [ - "gene_synonym", - "ASAP:ABE-0000450" - ], - [ - "gene_synonym", - "GeneID:944836" - ], - [ - "gene_synonym", - "ECK0127" - ], - [ - "gene_synonym", - "JW0124" - ], - [ - "gene_synonym", - "NP_414670.1" - ], - [ - "gene_synonym", - "b0128" - ], - [ - "gene_synonym", - "EcoGene:EG12321" - ], - [ - "gene_synonym", - "GI:16128121" - ] - ], - "dna_sequence": "ATGATGCATCTTTACTGGGTGGCGCTAAAAAGCATCTGGGCGAAAGAGATCCATCGCTTTATGCGTATCTGGGTGCAGACGCTGGTGCCGCCAGTCATCACCATGACCCTTTACTTTATTATCTTCGGTAACCTGATTGGTTCGCGTATTGGCGATATGCATGGCTTCAGCTATATGCAGTTCATCGTACCGGGGCTGATCATGATGTCGGTGATCACCAATGCCTACGCCAACGTTGCGTCATCATTTTTTGGTGCCAAGTTCCAGCGTAATATTGAAGAGCTGCTGGTAGCGCCGGTTCCGACTCACGTCATTATTGCCGGATATGTCGGCGGTGGCGTGGCGCGTGGTCTGTTTGTTGGCATTCTGGTGACGGCAATTTCACTGTTTTTTGTGCCATTTCAGGTGCATTCGTGGGTATTCGTTGCCTTAACGCTGGTGCTCACGGCGGTGTTGTTCTCCCTTGCGGGTTTGCTGAACGGTGTGTTTGCCAAAACGTTCGATGACATCAGCCTGGTGCCAACCTTTGTGTTAACGCCACTCACGTATTTGGGCGGGGTCTTTTACTCACTGACTTTGTTGCCGCCGTTCTGGCAAGGGCTGTCGCACCTGAACCCAATCGTTTATATGATCAGTGGTTTCCGCTACGGCTTCCTCGGTATCAATGATGTTCCGCTGGTCACTACCTTTGGCGTACTGGTGGTCTTTATTGTGGCGTTTTATTTGATCTGTTGGTCGCTGATCCAACGTGGACGTGGTTTGCGTAGCTAA", - "dna_sequence_length": 771, - "functions": [ - "putative ABC transporter permease" - ], - "id": "CDS_124", - "location": [ - [ - "NC_000913", - 143702, - "+", - 771 - ] - ], - "md5": "54a08dccd0aead8b26eec27035a4bf14", - "parent_gene": "", - "protein_md5": "b33785388ed7fee27027fd1c6f05e055", - "protein_translation": "MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGNLIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPTHVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLNGVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGFLGINDVPLVTTFGVLVVFIVAFYLICWSLIQRGRGLRS", - "protein_translation_length": 256, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947397" - ], - [ - "gene_synonym", - "yadI" - ], - [ - "gene_synonym", - "ASAP:ABE-0000453" - ], - [ - "gene_synonym", - "EcoGene:EG12322" - ], - [ - "gene_synonym", - "JW0125" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36881" - ], - [ - "gene_synonym", - "agaX" - ], - [ - "gene_synonym", - "GI:16128122" - ], - [ - "gene_synonym", - "b0129" - ], - [ - "gene_synonym", - "NP_414671.1" - ], - [ - "gene_synonym", - "ECK0128" - ] - ], - "dna_sequence": "ATGTTAGGTTGGGTAATTACCTGTCACGATGACCGGGCGCAAGAGATACTGGATGCGCTGGAGAAAAAACATGGGGCACTTCTTCAGTGCCGGGCCGTGAATTTCTGGCGCGGATTAAGCTCTAATATGCTCAGCCGCATGATGTGCGATGCTCTGCATGAAGCGGACTCTGGTGAGGGTGTCATCTTCTTAACCGATATAGCCGGAGCGCCACCGTATCGCGTGGCTTCATTATTAAGCCACAAACACTCCCGTTGCGAAGTGATTTCTGGTGTCACGTTACCGTTAATTGAACAGATGATGGCTTGCCGTGAAACCATGACCAGTTCAGAGTTTCGCGAGCGTATTGTCGAACTGGGTGCGCCGGAGGTGAGTAGTCTTTGGCACCAACAACAAAAAAATCCGCCTTTCGTCCTCAAACATAATTTGTATGAGTATTAA", - "dna_sequence_length": 441, - "functions": [ - "putative PTS Enzyme IIA" - ], - "id": "CDS_125", - "location": [ - [ - "NC_000913", - 144577, - "+", - 441 - ] - ], - "md5": "f36ddd0beb4c8aae99b60a30b3369675", - "parent_gene": "", - "protein_md5": "7ce8c621e72a670ddf90e4b63bf9c0ae", - "protein_translation": "MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNMLSRMMCDALHEADSGEGVIFLTDIAGAPPYRVASLLSHKHSRCEVISGVTLPLIEQMMACRETMTSSEFRERIVELGAPEVSSLWHQQQKNPPFVLKHNLYEY", - "protein_translation_length": 146, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31666" - ], - [ - "gene_synonym", - "GeneID:946536" - ], - [ - "gene_synonym", - "NP_414672.1" - ], - [ - "gene_synonym", - "b0130" - ], - [ - "gene_synonym", - "yadE" - ], - [ - "gene_synonym", - "JW0126" - ], - [ - "gene_synonym", - "ASAP:ABE-0000457" - ], - [ - "gene_synonym", - "EcoGene:EG11749" - ], - [ - "gene_synonym", - "GI:16128123" - ], - [ - "gene_synonym", - "ECK0129" - ] - ], - "dna_sequence": "ATGTACAAACAAGCTGTTATTCTCCTGCTGATGCTGTTTACCGCAAGTGTCAGTGCCGCGTTACCTGCCCGTTATATGCAAACCATCGAAAATGCTGCGGTCTGGGCGCAAATTGGTGACAAGATGGTGACCGTGGGGAATATTCGGGCCGGACAAATCATTGCCGTGGAGCCCACTGCCGCAAGTTATTACGCATTTAATTTTGGCTTTGGCAAAGGTTTTATCGATAAAGGTCATCTCGAGCCGGTTCAGGGGCGACAAAAAGTTGAAGACGGTTTGGGCGACCTCAACAAGCCGCTGAGTAATCAGAACTTAGTTACCTGGAAAGATACGCCGGTCTATAACGCGCCGAGTGCGGGAAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACCCGATTTTGCATAAACTGAAAGACAGGTTAAATCAAACCTGGTATCAGATCCGTATTGGCGATCGACTGGCCTATATCAGCGCACTGGATGCCCAACCCGATAATGGCCTGTCGGTGCTAACCTATCACCATATTCTGCGCGACGAAGAAAACACCCGTTTTCGCCATACTTCGACGACCACATCGGTACGCGCTTTCAATAACCAGATGGCCTGGCTGCGTGACAGGGGATACGCGACACTGAGCATGGTGCAGCTGGAAGGCTACGTGAAGAATAAGATCAATCTCCCTGCGCGAGCGGTGGTGATTACCTTTGATGATGGCCTCAAGTCGGTGAGCCGCTATGCGTATCCTGTGTTGAAACAATATGGCATGAAGGCGACGGCGTTTATTGTTACCTCACGCATCAAACGTCACCCGCAGAAGTGGAACCCAAAATCGCTGCAATTTATGAGCGTTTCTGAGCTTAACGAAATTCGCGATGTATTTGATTTCCAGTCACATACCCATTTTTTGCATCGGGTAGATGGTTATCGCCGACCCATATTACTGAGCCGTAGTGAGCACAATATTCTGTTTGATTTTGCACGTTCACGCCGCGCTCTGGCGCAATTTAATCCGCATGTCTGGTATCTTTCGTATCCGTTTGGCGGATTTAATGACAACGCCGTGAAGGCAGCAAACGATGCCGGATTTCACCTGGCGGTGACAACCATGAAAGGCAAAGTAAAACCGGGGGATAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCGCGGCTGGTGAGTAACCAGCCGCAGGGATAA", 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"gene_synonym", - "GeneID:944958" - ] - ], - "dna_sequence": "GTGTTAATTATCGAAACCCTGCCGCTGCTGCGTCAGCAAATTCGCCGCCTGCGTATGGAAGGCAAGCGCGTGGCGCTGGTGCCTACCATGGGTAACCTGCACGATGGCCATATGAAGCTGGTCGACGAAGCCAAAGCCCGCGCCGATGTGGTCGTCGTCAGTATTTTCGTTAACCCGATGCAGTTCGACCGCCCGGAAGATCTGGCTCGTTATCCACGGACCTTGCAGGAGGACTGCGAGAAGCTAAACAAACGTAAAGTGGATTTAGTTTTCGCCCCTTCGGTAAAAGAGATCTACCCGAACGGTACTGAAACCCACACTTACGTTGACGTTCCTGGCCTTTCGACCATGCTGGAAGGTGCCAGCCGTCCGGGACATTTTCGCGGCGTTTCGACTATTGTCAGCAAGCTGTTCAACCTGGTCCAGCCGGACATCGCCTGCTTCGGTGAAAAAGATTTTCAGCAACTGGCGCTGATCCGCAAAATGGTTGCCGATATGGGCTTCGATATTGAGATTGTCGGTGTGCCAATTATGCGCGCCAAAGACGGTCTGGCGCTAAGTTCCCGTAACGGTTATCTGACGGCGGAACAACGCAAAATTGCGCCTGGTCTGTACAAAGTTTTAAGTTCGATTGCTGACAAATTGCAGGCTGGGGAACGGGATCTCGATGAAATTATTACCATTGCGGGGCAAGAACTGAATGAAAAAGGCTTCCGCGCCGATGATATTCAGATTCGCGATGCCGACACATTGCTGGAAGTTTCTGAAACCAGCAAACGGGCAGTAATTCTGGTAGCCGCCTGGCTTGGCGATGCTCGCCTGATCGACAACAAAATGGTCGAGCTGGCGTAA", - "dna_sequence_length": 852, - "functions": [ - "pantothenate synthetase" - ], - 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"UniProtKB/Swiss-Prot:P31057" - ], - [ - "gene_synonym", - "JW0130" - ] - ], - "dna_sequence": "ATGAAACCGACCACCATCTCCTTACTGCAGAAGTACAAACAGGAAAAAAAACGTTTCGCGACCATCACCGCTTATGACTATAGCTTCGCCAAACTCTTTGCTGATGAAGGGCTTAACGTCATGCTGGTGGGCGATTCGCTGGGCATGACGGTTCAGGGGCACGACTCCACCCTGCCAGTTACCGTTGCCGATATCGCCTACCACACTGCCGCCGTACGTCGCGGCGCACCAAACTGCCTGCTGCTGGCTGACCTGCCGTTTATGGCGTATGCCACGCCGGAACAAGCCTTCGAAAACGCCGCAACGGTTATGCGTGCCGGTGCTAACATGGTCAAAATTGAAGGCGGTGAGTGGCTGGTAGAAACCGTACAAATGCTGACCGAACGTGCCGTTCCTGTATGTGGTCACTTAGGTTTAACACCACAGTCAGTGAATATTTTCGGTGGCTACAAAGTTCAGGGGCGCGGCGATGAAGCGGGCGATCAACTGCTCAGCGATGCATTAGCCTTAGAAGCTGCTGGGGCACAGCTGCTGGTGCTGGAATGCGTGCCGGTTGAACTGGCAAAACGTATTACCGAAGCACTGGCGATCCCGGTTATTGGCATTGGCGCAGGCAACGTCACTGACGGGCAGATCCTCGTGATGCACGACGCCTTTGGTATTACCGGCGGTCACATTCCTAAATTCGCTAAAAATTTCCTCGCCGAAACGGGCGACATCCGCGCGGCTGTGCGGCAGTATATGGCTGAAGTGGAGTCCGGCGTTTATCCGGGCGAAGAACACAGTTTCCATTAA", - "dna_sequence_length": 795, - "functions": [ - "3-methyl-2-oxobutanoate hydroxymethyltransferase" - ], - 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"JW0131" - ] - ], - "dna_sequence": "ATGAAGACTATCTTCAGGTACATTCTTTTTTTAGCACTGTATTCTTGTTGTAATACAGTCAGTGCATATACAAGTTTTATTGTGGGAAATAATGCAGGAGTTGATAACTATCGAGGCCCCTCCACTGCCGCACAGATGACCTTTAATTACACATCAACAGCAAGCAACTTGGTTTTTTATAAACCCACGCAGCTCGGCCCGACTGGGGTAAAAATGTACTGGTCATACCTGGATACAGGTACCGGTGGTGGTATTCTTTACTGCAATACATCTGGCAGAGCGAATCCTGGTCCAATAACTATTGAAAATGCCATGGTCTATTCAGGTAAAGATTATGGCGGACATAAACTATTTAATACATCTGTTCCTGGTCTGTATTACACCATGTTAATATCAAGGGTCTGGTCTGCATACGATACAATAACTGACATTCAATCGCCAGGAATCTATATCGGAGATCCTTCCAACCAAGAATTTTTCTTTTCCGTCACAGACAGCGATCTACAAACTAAGGGTTGCAACAAAGCAGACGACTACGATAAGTTTTGGGCTATTGGTGGTATAGTACACAACATAACTGTTGAATTTTATACAGATACTAATTTCGATCCTACACTTAATCAGCAAGTCCAGTTATCCAGTTCATCAAATTACCTTTATTCGTTTAAGGCCTACAGTCCTGGTACAAAAGTTGTAGATCACAGCAACCACATTTATGTCAATTTCACACTGAATAATGTCAAATTAACCTTACCAACATGTTTTACCTCCATACTTACCGGGCCATCAGTCAATGGTTCAACGGTTAGAATGGGAGAATATAGCTCTGGGACAATTAAAAATGGCGCTTCACCTGTTCCCTTTGATATCTCGCTTCAGAATTGTATTCGTGTGCGTAATATTGAAACAAAACTCGTCACTGGAAAAGTAGGTACTCAAAACACACAACTGCTTGGTAATACGCTTACTGGAAGCACTGCCGCCAAAGGCGTTGGCGTACTCATTGAAGGTTTAGCAACCAGTAAAAATCCGCTAATGACATTAAAACCTAATGATACGAATTCTGTTTATATAGATTATGAAACCGAAGATGACACCTCCGATGGGGTTTACCCTAATCAAGGTAACGGCACATCACAGCCTCTTCATTTCCAGGCAACATTAAAGCAAGACGGGAATATTGCTATCGAACCCGGCGAATTTAAAGCCACCAGTACTTTCCAGGTAACCTATCCCTGA", 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"gene_synonym", - "b0136" - ], - [ - "gene_synonym", - "ECK0135" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37016" - ], - [ - "gene_synonym", - "GI:16128129" - ], - [ - "gene_synonym", - "EcoGene:EG12325" - ], - [ - "gene_synonym", - "JW0132" - ] - ], - "dna_sequence": "ATGCATCCCACTCAACGTAAGCTGATGAAGAGAATAATTCTGTTTCTGTCATTACTGTTTTGCATCGCCTGTCCAGCCATTGCTGGACAGGATATTGACCTTGTTGCCAATGTAAAAAACAGCACCTGCAAAAGCGGAATCAGTAACCAGGGTAATATTGATCTTGGCGTCGTTGGGGTGGGATATTTTTCAGGTAATGTTACTCCTGAAAGTTATCAACCAGGTGGAAAAGAGTTCACTATCACTGTATCCGACTGTGCATTACAGGGAACTGGCGATGTGCTAAATCAGTTACATATTGATTTTAGAGCCCTTAGCGGTGTCATGGCTGCTGGCTCTAGGCAAATATTTGCTAATGAAATTTCGTCAGGAGCAAGTAATGTAGGAGTAGTTATATTTTCTACTCAGGATTCGGCGAATACATTCAATGTTCTTAATGCTTCAGGCGGATCTCGTTCCGTTTATCCAGTAATGTCGGATGACATGAATGGTTCATCCTGGAAATTTAGCACCCGAATGCAAAAAATCGATCCTGCATTGAGTGTTACATCTGGTCAACTTATGAGCCATGTGTTAGTGGATATTTACTACGAATAA", - "dna_sequence_length": 597, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_132", - "location": [ - [ - "NC_000913", - 151599, - "-", - 597 - ] - ], - "md5": "c454bd467f3b216649fd41bc76c964e3", - "parent_gene": "", - "protein_md5": "16b02670050e71951c1747a616553447", - "protein_translation": "MHPTQRKLMKRIILFLSLLFCIACPAIAGQDIDLVANVKNSTCKSGISNQGNIDLGVVGVGYFSGNVTPESYQPGGKEFTITVSDCALQGTGDVLNQLHIDFRALSGVMAAGSRQIFANEISSGASNVGVVIFSTQDSANTFNVLNASGGSRSVYPVMSDDMNGSSWKFSTRMQKIDPALSVTSGQLMSHVLVDIYYE", - "protein_translation_length": 198, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000475" - ], - [ - "gene_synonym", - "GeneID:944829" - ], - [ - "gene_synonym", - "yadL" - ], - [ - "gene_synonym", - "NP_414679.1" - ], - [ - "gene_synonym", - "EcoGene:EG12326" - ], - [ - "gene_synonym", - "b0137" - ], - [ - "gene_synonym", - "ECK0136" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37017" - ], - [ - "gene_synonym", - "GI:16128130" - ], - [ - "gene_synonym", - "JW0133" - ] - ], - "dna_sequence": "ATGATGACATTTAAAAATTTACGTTATGGATTATCCAGCAGTGTCGTTTTGGCTGCCTCATTGTTCAGCGTACTCTCTTATGCGGCAACAGACAGTATTGGACTGACCGTTATTACTACTGTAGAAATGGGTACTTGTACCGCTACATTAGTAAATGACTCTGATCAGGACATTTCTGTTGTTGATTTTGGTGATGTATATATTTCTGAAATCAATGCCAAGACCAAAGTAAAAACATTCAAACTCAAATTCAAAGACTGTGCGGGTATCCCCAATAAAAAAGCGCAAATAAAATTAACCAAGCGAGCCACATGCGAGGGAACTGCTAATGACGGTGCGGGGTTTGCAAATGGTTCCACAGCCGCAGATAAAGCAAGTGCTGTCGCCGTTGAAGTCTGGAGCACTGTAACTCCGGCAACAGGGAGTGCAACACAATTTAGCTGTGTAACACCAGCATCACAAGAGGTAACAATCTCCACTGCAGCCAATGCGGTCGTTTATTATCCGATGAGTGCACGCCTGGTCGTGGAAAAAAATAAAACCGTAAACAATGTCACTGCGGGTAAGTTTTCTGCACCAGCCACATTTACAGTAACCTATAACTAA", - "dna_sequence_length": 606, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_133", - "location": [ - [ - "NC_000913", - 152231, - "-", - 606 - ] - ], - "md5": "8e81413249537fd794fc79741b13b331", - "parent_gene": "", - "protein_md5": "d89ccbae5a46f65a7becc1673e87de90", - "protein_translation": "MMTFKNLRYGLSSSVVLAASLFSVLSYAATDSIGLTVITTVEMGTCTATLVNDSDQDISVVDFGDVYISEINAKTKVKTFKLKFKDCAGIPNKKAQIKLTKRATCEGTANDGAGFANGSTAADKASAVAVEVWSTVTPATGSATQFSCVTPASQEVTISTAANAVVYYPMSARLVVEKNKTVNNVTAGKFSAPATFTVTYN", - "protein_translation_length": 201, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000477" - ], - [ - "gene_synonym", - "b0138" - ], - [ - "gene_synonym", - "JW0134" - ], - [ - "gene_synonym", - "yadM" - ], - [ - "gene_synonym", - "GeneID:944828" - ], - [ - "gene_synonym", - "GI:90111089" - ], - [ - "gene_synonym", - "EcoGene:EG12327" - ], - [ - "gene_synonym", - "ECK0137" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37018" - ], - [ - "gene_synonym", - "NP_414680.4" - ] - ], - "dna_sequence": "ATGATAAAAACAACGCCACATAAAATAGTGATACTGATGGGAATATTATTATCACCCTCAGTATTTGCAACGGATATTAATGTAGAGTTTACAGCCACTGTCAAAGCGACAACCTGTAACATCACACTTACTGGTAATAACGTCACGAATGATGGCAATAATAACTACACATTGAGAATCCCTAAGATGGGTCTGGATAAGATCGCGAATAAAACGACAGAATCTCAGGCTGATTTTAAACTGGTTGCCAGTGGGTGCAGCAGTGGCATCAGTTGGATTGATACCACTCTGACCGGAAATGCATCATCAAGCTCACCTAAGCTTATTATACCGCAGTCTGGTGATTCATCTTCGACGACAAGTAATATCGGTATGGGTTTCAAAAAACGGACTACTGATGATGCCACTTTCCTTAAACCTAACAGTGCGGAAAAGATACGCTGGAGCACAGACGAGATGCAGCCCGATAAGGGTCTTGAAATGACCGTTGCGCTACGTGAAACAGATGCAGGGCAAGGCGTACCGGGGAATTTTCGTGCACTGGCGACGTTTAATTTCATCTATCAATAA", - "dna_sequence_length": 570, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_134", - "location": [ - [ - "NC_000913", - 152812, - "-", - 570 - ] - ], - "md5": "cab5af42fa404036fa56d9e19dd6fe03", - "parent_gene": "", - "protein_md5": "7da70447456e55090456d8217c01f976", - "protein_translation": "MIKTTPHKIVILMGILLSPSVFATDINVEFTATVKATTCNITLTGNNVTNDGNNNYTLRIPKMGLDKIANKTTESQADFKLVASGCSSGISWIDTTLTGNASSSSPKLIIPQSGDSSSTTSNIGMGFKKRTTDDATFLKPNSAEKIRWSTDEMQPDKGLEMTVALRETDAGQGVPGNFRALATFNFIYQ", - "protein_translation_length": 189, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0139" - ], - [ - "gene_synonym", - "htrE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33129" - ], - [ - "gene_synonym", - "NP_414681.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000479" - ], - [ - "gene_synonym", - "GeneID:944819" - ], - [ - "gene_synonym", - "JW0135" - ], - [ - "gene_synonym", - "GI:16128132" - ], - [ - "gene_synonym", - "ECK0138" - ], - [ - "gene_synonym", - "EcoGene:EG11972" - ] - ], - "dna_sequence": "GTGACTATAGAATATACTAAAAATTATCATCATCTGACCCGTATCGCCACGTTTTGCGCGCTGCTGTATTGCAATACTGCTTTCAGTGCTGAACTCGTTGAATATGACCATACCTTCCTGATGGGGCAGAATGCATCTAATATTGATCTCAGCCGGTACAGTGAAGGTAACCCCGCTATACCGGGTGTTTACGACGTCAGTGTTTATGTAAACGACCAACCAATCATTAACCAAAGTATTACATTTGTCGCAATTGAAGGAAAAAAGAACGCCCAGGCTTGTATCACATTAAAGAATTTATTGCAGTTTCATATTAATTCTCCCGATATAAATAACGAAAAAGCCGTTCTGCTTGCCAGGGATGAAACGCTCGGCAATTGCCTCAATTTGACGGAAATTATCCCTCAGGCTTCTGTTCGTTATGACGTTAACGATCAACGTCTGGATATAGACGTTCCTCAAGCCTGGGTAATGAAAAATTACCAAAACTATGTTGATCCATCGTTATGGGAAAACGGCATTAATGCGGCCATGTTGTCATACAACCTCAACGGATATCATAGTGAAACCCCTGGTCGAAAAAATGAAAGCATTTATGCTGCATTTAACGGTGGGATGAATTTAGGTGCATGGCGACTGCGTGCCTCGGGCAACTACAACTGGATGACCGATTCTGGCAGTAATTATGATTTTAAGAATCGGTATGTTCAGCGTGATATCGCCTCGCTGCGTTCTCAACTCATTCTTGGTGAGTCTTATACGACGGGCGAAACCTTTGATTCCGTCAGTATCCGAGGCATTCGTTTATACAGTGACAGCCGCATGTTGCCTCCGACTTTAGCCAGCTTTGCGCCTATCATTCATGGCGTTGCCAATACCAACGCCAAAGTCACTATTACGCAAGGTGGCTATAAGATTTATGAAACGACGGTGCCGCCAGGCGCTTTCGTCATTGATGATCTGAGTCCGTCAGGGTACGGCAGCGATCTTATTGTTACCATCGAAGAATCCGATGGCTCAAAGCGGACATTCTCGCAACCTTTCTCATCCGTTGTTCAAATGTTACGCCCTGGCGTTGGACGTTGGGATATTAGCGGCGGTCAGGTCTTAAAAGATGATATTCAGGATGAGCCTAATTTATTTCAAGCAAGCTACTACTACGGCCTGAATAACTATCTGACGGGTTATACCGGTATTCAGATAACCGATAATAACTATACCGCTGGTTTGTTAGGTCTTGGTCTGAATACTTCAGTTGGTGCATTTTCTTTCGATGTGACTCATTCCAATGTTCGTATCCCGGATGATAAAACATACCAGGGGCAAAGTTATCGTGTTTCCTGGAACAAGTTATTCGAAGAAACAAGTACTTCACTGAATATCGCGGCCTATCGCTATTCGACACAGAATTACCTTGGTCTTAATGATGCACTAACTCTAATTGATGAAGTGAAACATCCCGAACAAGATCTTGAACCGAAATCCATGCGTAATTACTCACGCATGAAAAATCAGGTTACGGTCAGTATTAACCAACCGTTGAAATTTGAGAAAAAAGATTACGGTTCATTTTATCTTTCCGGAAGTTGGTCCGATTACTGGGCTTCCGGACAAAATCGTAGCAATTACTCTATTGGCTACAGTAACAGTACATCCTGGGGCAGCTACAGTGTCAGTGCCCAGCGTTCATGGAATGAAGACGGCGACACTGACGATAGCGTTTATCTTAGTTTCACCATTCCAATTGAAAAATTACTTGGCACTGAACAACGTACTTCAGGTTTCCAGAGTATTGATACTCAAATAAGCAGTGACTTTAAGGGTAATAACCAACTCAACGTTAGCAGCAGTGGCTATAGCGATAACGCTCGCGTCAGTTATAGCGTGAATACTGGCTATACGATGAATAAAGCCAGCAAAGATTTGAGTTATGTTGGGGGTTATGCCAGCTATGAGTCACCATGGGGAACGCTGGCAGGTTCAATTTCTGCAAATAGCGATAACAGCCGTCAAGTTTCTCTCAGCACCGACGGTGGTTTTGTATTGCATAGCGGTGGACTGACTTTCAGTAATGATAGTTTTAGCGACTCCGATACACTGGCGGTAGTTCAGGCTCCAGGTGCTCAAGGAGCGCGAATAAATTATGGCAACAGTACTATCGATCGATGGGGTTATGGTGTCACCAGCGCTCTTTCTCCTTATCATGAAAACCGTATCGCGCTGGATATCAACGATCTTGAGAACGATGTTGAATTAAAAAGTACCAGTGCAGTAGCTGTACCGCGTCAGGGTTCAGTCGTCTTTGCTGATTTTGAAACCGTGCAAGGGCAATCAGCCATTATGAACATCACACGAAGTGATGGTAAAAATATTCCATTTGCTGCAGATATTTATGATGAGCAAGGCAATGTCATTGGTAATGTTGGACAGGGTGGACAAGCATTTGTTCGTGGTATTGAGCAGCAGGGAAATATCAGCATTAAATGGCTCGAACAAAGTAAACCCGTAAGTTGTCTTGCGCATTATCAACAAAGCCCAGAAGCAGAAAAAATAGCACAATCTATTATTCTGAATGGAATTCGGTGTCAGATTCAGTAA", 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"MTIEYTKNYHHLTRIATFCALLYCNTAFSAELVEYDHTFLMGQNASNIDLSRYSEGNPAIPGVYDVSVYVNDQPIINQSITFVAIEGKKNAQACITLKNLLQFHINSPDINNEKAVLLARDETLGNCLNLTEIIPQASVRYDVNDQRLDIDVPQAWVMKNYQNYVDPSLWENGINAAMLSYNLNGYHSETPGRKNESIYAAFNGGMNLGAWRLRASGNYNWMTDSGSNYDFKNRYVQRDIASLRSQLILGESYTTGETFDSVSIRGIRLYSDSRMLPPTLASFAPIIHGVANTNAKVTITQGGYKIYETTVPPGAFVIDDLSPSGYGSDLIVTIEESDGSKRTFSQPFSSVVQMLRPGVGRWDISGGQVLKDDIQDEPNLFQASYYYGLNNYLTGYTGIQITDNNYTAGLLGLGLNTSVGAFSFDVTHSNVRIPDDKTYQGQSYRVSWNKLFEETSTSLNIAAYRYSTQNYLGLNDALTLIDEVKHPEQDLEPKSMRNYSRMKNQVTVSINQPLKFEKKDYGSFYLSGSWSDYWASGQNRSNYSIGYSNSTSWGSYSVSAQRSWNEDGDTDDSVYLSFTIPIEKLLGTEQRTSGFQSIDTQISSDFKGNNQLNVSSSGYSDNARVSYSVNTGYTMNKASKDLSYVGGYASYESPWGTLAGSISANSDNSRQVSLSTDGGFVLHSGGLTFSNDSFSDSDTLAVVQAPGAQGARINYGNSTIDRWGYGVTSALSPYHENRIALDINDLENDVELKSTSAVAVPRQGSVVFADFETVQGQSAIMNITRSDGKNIPFAADIYDEQGNVIGNVGQGGQAFVRGIEQQGNISIKWLEQSKPVSCLAHYQQSPEAEKIAQSIILNGIRCQIQ", - "protein_translation_length": 865, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11973" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33128" - ], - [ - "gene_synonym", - "yadV" - ], - [ - "gene_synonym", - "ASAP:ABE-0000482" - ], - [ - "gene_synonym", - "NP_414682.1" - ], - [ - "gene_synonym", - "b0140" - ], - [ - "gene_synonym", - "JW0136" - ], - [ - "gene_synonym", - "GI:16128133" - ], - [ - "gene_synonym", - "ecpD" - ], - [ - "gene_synonym", - "ECK0139" - ], - [ - "gene_synonym", - "GeneID:944859" - ] - ], - "dna_sequence": "ATGTTTTTTAACACCAAACATACAACAGCTTTATGCTTCGTAACCTGTATGGCTTTTAGTTCATCGTCTATTGCGGACATTGTCATTTCGGGTACTCGCGTAATATATAAAAGCGATCAAAAAAGTGTCAACGTACGTCTGGAAAATAAAGGGAATAACCCGTTGCTTGTCCAGAGTTGGTTAGATACTGGCGATGACAACGCTGAGCCTGGCAGTATTACAGTCCCTTTTACTGCTACGCCGCCAGTATCGCGTATTGATGCCAAACGTGGGCAAACAATCAAATTAATGTACACAGCCAGCACCTCACTGCCTAAAGACAGAGAGAGCGTGTTCTGGTTTAACGTACTGGAAGTTCCACCAAAACCAGATGCAGAAAAGGTCGCGAATCAAAGCCTGCTGCAACTGGCATTTCGCACACGTATAAAACTTTTCTATCGCCCGGATGGATTGAAGGGAAATCCCTCTGAAGCCCCGTTAGCCCTGAAGTGGTTCTGGTCAGGTTCAGAAGGTAAGGCGTCATTACGAGTGACCAATCCAACCCCTTACTACGTCTCTTTTAGCAGTGGTGATTTAGAAGCTAGCGGTAAACGCTATCCGATTGATGTGAAAATGATTGCACCATTTAGTGATGAGGTCATGAAAGTCAATGGCCTTAATGGCAAAGCGAATTCTGCAAAAGTGCATTTTTACGCCATTAATGACTTTGGTGGCGCAATTGAAGGTAATGCCAGGCTGTAA", - "dna_sequence_length": 741, - "functions": [ - "putative periplasmic pilin chaperone" - ], - "id": "CDS_136", - "location": [ - [ - "NC_000913", - 156201, - "-", - 741 - ] - ], - "md5": "8c3c4a51da6298fccc9675d78f6ac4e8", - "parent_gene": "", - "protein_md5": "5881a3619c4db00cb1dc8cc73d574f4e", - "protein_translation": "MFFNTKHTTALCFVTCMAFSSSSIADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDVKMIAPFSDEVMKVNGLNGKANSAKVHFYAINDFGGAIEGNARL", - "protein_translation_length": 246, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yadN" - ], - [ - "gene_synonym", - "ECK0140" - ], - [ - "gene_synonym", - "NP_414683.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37050" - ], - [ - "gene_synonym", - "GeneID:944841" - ], - [ - "gene_synonym", - "ASAP:ABE-0000487" - ], - [ - "gene_synonym", - "b0141" - ], - [ - "gene_synonym", - "EcoGene:EG12328" - ], - [ - "gene_synonym", - "JW0137" - ], - [ - "gene_synonym", - "GI:16128134" - ] - ], - "dna_sequence": "ATGTCTAAAAAATTAGGTTTTGCCCTGTCTGGTCTTATGCTGGCGATGGTTGCAGGTACTGCTTCTGCTGATATGGACGGCGGTCAGTTAAATATCAGTGGTCTGGTTGTTGATAACACCTGTGAAACCCGCGTTGACGGCGGTAACAAGGATGGTCTGATCCTGCTGCAAACCGCAACCGTTGGTGAAATCGATGCTGGCGTACTGAATGACACCGTTGGCGCTAAAGCTAAACCTTTCAGCATCACCGTTGACTGCAGCAAAGCAAATCCGAATCCAGGTAGCACGGCTAAAATGACCTTCGGTTCTGTTTTCTTTGGTAACAGCAAAGGGACTTTGAACAACGACATGTCTATTAACAACCCATCTGACGGCGTTAATATCGCTCTACACAATATTGATGGTTCCACTATCAAACAGGTTCAAATTAACAACCCTGGCGATGTGTATACTAAAGCCCTGGATGCAACGACAAAATCTGCTGTTTATGATTTTAAAGCGTCTTACGTTCGTGCCGTCGCAGACCAAACAGCAACTGCTGGTTATGTAAAAACTAACACTGCATACACCATTACTTATCAGTAA", - "dna_sequence_length": 585, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_137", - "location": [ - [ - "NC_000913", - 156883, - "-", - 585 - ] - ], - "md5": "21e1ce12125b0f18376eeeae0c5bf90c", - "parent_gene": "", - "protein_md5": "c3ed61e86ca762340fa0f1438321b49a", - "protein_translation": "MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETRVDGGNKDGLILLQTATVGEIDAGVLNDTVGAKAKPFSITVDCSKANPNPGSTAKMTFGSVFFGNSKGTLNNDMSINNPSDGVNIALHNIDGSTIKQVQINNPGDVYTKALDATTKSAVYDFKASYVRAVADQTATAGYVKTNTAYTITYQ", - "protein_translation_length": 194, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0141" - ], - [ - "gene_synonym", - "EcoGene:EG11374" - ], - [ - "gene_synonym", - "GeneID:948792" - ], - [ - "gene_synonym", - "ASAP:ABE-0000491" - ], - [ - "gene_synonym", - "b0142" - ], - [ - "gene_synonym", - "NP_414684.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P26281" - ], - [ - "gene_synonym", - "JW0138" - ], - [ - "gene_synonym", - "GI:16128135" - ], - [ - "gene_synonym", - "folK" - ] - ], - "dna_sequence": "ATGACAGTGGCGTATATTGCCATAGGCAGCAATCTGGCCTCTCCGCTGGAGCAGGTCAATGCTGCCCTGAAAGCATTAGGCGATATCCCTGAAAGCCACATTCTTACCGTTTCTTCGTTTTACCGCACCCCACCGCTGGGGCCGCAAGATCAACCCGATTACTTAAACGCAGCCGTGGCGCTGGAAACCTCTCTTGCACCTGAAGAGCTACTCAATCACACACAGCGTATTGAATTGCAGCAAGGTCGCGTCCGCAAAGCTGAACGCTGGGGACCACGCACGCTGGATCTCGACATCATGCTGTTTGGTAATGAAGTGATAAATACTGAACGCCTGACCGTTCCGCACTACGATATGAAGAATCGTGGATTTATGCTGTGGCCGCTGTTTGAAATCGCGCCGGAGTTGGTGTTTCCTGATGGGGAGATGTTGCGTCAAATCTTACATACAAGAGCATTTGACAAATTAAACAAATGGTAA", - "dna_sequence_length": 480, - "functions": [ - "2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase" - ], - "id": "CDS_138", - "location": [ - [ - "NC_000913", - 157732, - "-", - 480 - ] - ], - "md5": "ea9ab2a4f32ae9bee4a6d0851a91f5ac", - "parent_gene": "", - "protein_md5": "8ec3f596357e83c64d4a301a0a64841c", - "protein_translation": "MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW", - "protein_translation_length": 159, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "pcnB" - ], - [ - "gene_synonym", - "ECK0142" - ], - [ - "gene_synonym", - "ASAP:ABE-0000493" - ], - [ - "gene_synonym", - "EcoGene:EG10690" - ], - [ - "gene_synonym", - "JW5808" - ], - [ - "gene_synonym", - "b0143" - ], - [ - "gene_synonym", - "GI:162135892" - ], - [ - "gene_synonym", - "GeneID:947318" - ], - [ - "gene_synonym", - "NP_414685.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABF1" - ] - ], - "dna_sequence": "ATTTTTACCCGAGTCGCTAATTTTTGCCGCAAGGTGCTAAGCCGCGAGGAAAGCGAGGCTGAACAGGCAGTCGCCCGTCCACAGGTGACGGTGATCCCGCGTGAGCAGCATGCTATTTCCCGCAAAGATATCAGTGAAAATGCCCTGAAGGTAATGTACAGGCTCAATAAAGCGGGATACGAAGCCTGGCTGGTTGGCGGCGGCGTGCGCGACCTGTTACTTGGCAAAAAGCCGAAAGATTTTGACGTAACCACTAACGCCACGCCTGAGCAGGTGCGCAAACTGTTCCGTAACTGCCGCCTGGTGGGTCGCCGTTTCCGTCTGGCTCATGTAATGTTTGGCCCGGAGATTATCGAAGTTGCGACCTTCCGTGGACACCACGAAGGTAACGTCAGCGACCGCACGACCTCCCAACGCGGGCAAAACGGCATGTTGCTGCGCGACAACATTTTCGGCTCCATCGAAGAAGACGCCCAGCGCCGCGATTTCACTATCAACAGCCTGTATTACAGCGTAGCGGATTTTACCGTCCGTGATTACGTTGGCGGCATGAAGGATCTGAAGGACGGCGTTATCCGTCTGATTGGTAACCCGGAAACGCGCTACCGTGAAGATCCGGTACGTATGCTGCGCGCGGTACGTTTTGCCGCCAAATTGGGTATGCGCATCAGCCCGGAAACCGCAGAACCGATCCCTCGCCTCGCTACCCTGCTGAACGATATCCCACCGGCACGCCTGTTTGAAGAATCGCTTAAACTGCTACAAGCGGGCTACGGTTACGAAACCTATAAGCTGTTGTGTGAATATCATCTGTTCCAGCCGCTGTTCCCGACCATTACCCGCTACTTCACGGAAAATGGCGACAGCCCGATGGAGCGGATCATTGAACAGGTGCTGAAGAATACCGATACGCGTATCCATAACGATATGCGCGTGAACCCGGCGTTCCTGTTTGCCGCCATGTTCTGGTACCCACTGCTGGAGACGGCACAGAAGATCGCCCAGGAAAGCGGCCTGACCTATCACGACGCTTTCGCGCTGGCGATGAACGACGTGCTGGACGAAGCCTGCCGTTCACTGGCAATCCCGAAACGTCTGACGACATTAACCCGCGATATCTGGCAGTTGCAGTTGCGTATGTCCCGTCGTCAGGGTAAACGCGCATGGAAACTGCTGGAGCATCCTAAGTTCCGTGCGGCTTATGACCTGTTGGCCTTGCGAGCTGAAGTTGAGCGTAACGCTGAACTGCAGCGTCTGGTGAAATGGTGGGGTGAGTTCCAGGTTTCCGCGCCACCAGACCAAAAAGGGATGCTCAACGAGCTGGATGAAGAACCGTCACCGCGTCGTCGTACTCGTCGTCCACGCAAACGCGCACCACGTCGTGAGGGTACCGCATGA", 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"EcoGene:EG11362" - ], - [ - "gene_synonym", - "GeneID:944846" - ], - [ - "gene_synonym", - "ASAP:ABE-0000497" - ], - [ - "gene_synonym", - "gluQ" - ], - [ - "gene_synonym", - "GI:226524698" - ], - [ - "gene_synonym", - "b0144" - ], - [ - "gene_synonym", - "JW5892" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27305" - ] - ], - "dna_sequence": "ATGCTCCCGCCTTATTTTTTGTTCAAAGAGATGACAGACACACAGTATATTGGCCGCTTCGCCCCCTCTCCTTCCGGCGAGCTTCATTTTGGCTCTCTGATCGCCGCGCTCGGCAGCTATTTGCAGGCTCGCGCCCGGCAAGGTCGCTGGCTGGTACGCATAGAAGATATCGACCCGCCTCGTGAAGTTCCCGGTGCCGCAGAAACTATCCTGCGCCAGCTGGAACATTACGGTCTGCACTGGGACGGCGATGTTCTCTGGCAATCGCAACGTCACGACGCCTATCGTGAAGCACTCGCCTGGTTACATGAACAAGGACTAAGTTATTACTGCACCTGTACGCGTGCGCGTATTCAAAGCATTGGCGGTATTTACGACGGTCATTGCCGGGTGTTGCATCATGGACCAGACAACGCCGCAGTGCGTATCCGCCAGCAGCATCCGGTCACGCAATTTACTGACCAGCTGCGCGGCATTATTCACGCCGACGAAAAACTGGCACGGGAAGATTTTATCATTCATCGCCGTGATGGGTTGTTCGCCTACAACCTGGCTGTTGTGGTTGATGATCATTTCCAGGGCGTTACAGAAATAGTGCGTGGGGCTGATCTGATTGAACCAACAGTAAGGCAAATCTCGCTGTACCAGCTTTTTGGCTGGAAAGTGCCAGATTACATTCATCTGCCGCTGGCGCTTAATCCACAAGGCGCTAAACTTTCCAAGCAGAATCATGCGCCTGCGTTGCCGAAAGGCGATCCACGCCCGGTACTAATCGCGGCACTTCAATTTCTGGGGCAGCAGGCAGAAGCACACTGGCAGGATTTCAGCGTCGAGCAAATCCTTCAGTCAGCCGTCAAAAACTGGCGGCTTACCGCCGTGCCCGAGTCGGCAATTGTAAATTCAACATTCTCAAATGCGTCATGCTGA", - "dna_sequence_length": 927, - "functions": [ - "glutamyl-Q tRNA(Asp) synthetase" - ], - "id": "CDS_140", - "location": [ - [ - "NC_000913", - 160112, - "-", - 927 - ] - ], - "md5": "435e621632ef9d5c799f464707d8726e", - "parent_gene": "", - "protein_md5": "e2be1e8b3e2c71bf2a14409c735e713d", - "protein_translation": "MLPPYFLFKEMTDTQYIGRFAPSPSGELHFGSLIAALGSYLQARARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWLHEQGLSYYCTCTRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLFGWKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRPVLIAALQFLGQQAEAHWQDFSVEQILQSAVKNWRLTAVPESAIVNSTFSNASC", - "protein_translation_length": 308, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0144" - ], - [ - "gene_synonym", - "ASAP:ABE-0000499" - ], - [ - "gene_synonym", - "dksA" - ], - [ - "gene_synonym", - "GeneID:944850" - ], - [ - "gene_synonym", - "NP_414687.1" - ], - [ - "gene_synonym", - "GI:16128138" - ], - [ - "gene_synonym", - "EcoGene:EG10230" - ], - [ - "gene_synonym", - "msmA" - ], - [ - "gene_synonym", - "b0145" - ], - [ - "gene_synonym", - "JW0141" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABS1" - ] - ], - "dna_sequence": "ATGCAAGAAGGGCAAAACCGTAAAACATCGTCCCTGAGTATTCTCGCCATCGCTGGGGTGGAACCATATCAGGAGAAGCCGGGCGAAGAGTATATGAATGAAGCCCAGCTGGCGCACTTCCGTCGTATTCTGGAAGCATGGCGTAATCAACTCAGGGATGAAGTCGATCGCACCGTTACACATATGCAGGATGAAGCAGCCAACTTCCCGGACCCGGTAGACCGTGCAGCCCAGGAAGAAGAGTTCAGCCTCGAACTGCGTAACCGCGATCGCGAGCGTAAGCTGATCAAAAAGATCGAGAAGACGCTGAAAAAAGTGGAAGACGAAGATTTCGGCTACTGCGAATCCTGCGGTGTTGAAATTGGTATTCGCCGTCTGGAAGCGCGCCCGACAGCCGATCTGTGCATCGACTGCAAAACGCTGGCTGAAATTCGCGAAAAACAGATGGCTGGCTAA", - "dna_sequence_length": 456, - "functions": [ - "transcriptional regulator of rRNA transcription", - "DnaK suppressor protein" - ], - "id": "CDS_141", - "location": [ - [ - "NC_000913", - 160604, - "-", - 456 - ] - ], - "md5": "58fa0e1837a66891a66ff1953cf79486", - "parent_gene": "", - "protein_md5": "5492ee991adc2f4a849470a45e6b2141", - "protein_translation": "MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG", - "protein_translation_length": 151, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0145" - ], - [ - "gene_synonym", - "NP_414688.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A823" - ], - [ - "gene_synonym", - "sfs" - ], - [ - "gene_synonym", - "sfsA" - ], - [ - "gene_synonym", - "GI:16128139" - ], - [ - "gene_synonym", - "b0146" - ], - [ - "gene_synonym", - "GeneID:944855" - ], - [ - "gene_synonym", - "JW0142" - ], - [ - "gene_synonym", - "EcoGene:EG10949" - ], - [ - "gene_synonym", - "ASAP:ABE-0000503" - ], - [ - "gene_synonym", - "sfs1" - ] - ], - "dna_sequence": "ATGGAATTTTCTCCCCCTCTACAGCGCGCGACGCTAATTCAGCGTTACAAACGTTTTTTAGCCGATGTGATCACACCCGATGGTCGCGAATTAACGCTACACTGCCCGAATACGGGTGCGATGACCGGTTGTGCAACGCCTGGCGATACCGTCTGGTATTCGACTTCAGACAACACCAAACGGAAATACCCACACACCTGGGAATTAACTCAAAGCCAGAGCGGCGCATTTATTTGCGTCAACACGCTTTGGGCTAACAGGTTGACGAAAGAGGCTATCCTTAATGAATCAATTTCAGAACTGTCAGGCTATAGCTCGCTGAAAAGCGAAGTAAAATACGGCGCAGAACGCAGCCGTATTGACTTTATGTTGCAGGCGGATTCGCGTCCAGACTGCTATATTGAAGTGAAATCGGTTACGTTAGCGGAGAACGAACAGGGATATTTTCCCGATGCGGTCACTGAACGAGGTCAGAAACACCTTCGGGAGTTGATGAGCGTAGCGGCTGAAGGCCAGCGTGCGGTTATCTTTTTCGCCGTGCTGCATTCAGCCATTACACGGTTTTCACCCGCGCGCCACATCGATGAGAAATACGCGCAACTATTGTCAGAAGCTCAACAGAGGGGGGTAGAAATTCTGGCTTACAAAGCGGAAATTTCTGCTGAAGGCATGGCTCTTAAAAAATCACTGCCGGTTACATTGTAG", - "dna_sequence_length": 705, - "functions": [ - "sugar fermentation stimulation protein A" - ], - "id": "CDS_142", - "location": [ - [ - "NC_000913", - 161486, - "-", - 705 - ] - ], - "md5": "8e53e78e69f244d72289588dc29ba4e3", - "parent_gene": "", - "protein_md5": "52f8d87678b685eb9a2b7791673843d9", - "protein_translation": "MEFSPPLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELSGYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKHLRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISAEGMALKKSLPVTL", - "protein_translation_length": 234, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37025" - ], - [ - "gene_synonym", - "ECK0146" - ], - [ - "gene_synonym", - "GeneID:944848" - ], - [ - "gene_synonym", - "GI:90111091" - ], - [ - "gene_synonym", - "NP_414689.4" - ], - [ - "gene_synonym", - "EcoGene:EG12330" - ], - [ - "gene_synonym", - "JW5011" - ], - [ - "gene_synonym", - "ligT" - ], - [ - "gene_synonym", - "b0147" - ], - [ - "gene_synonym", - "yadP" - ], - [ - "gene_synonym", - "ASAP:ABE-0000505" - ] - ], - "dna_sequence": "ATGTCTGAACCGCAACGTCTGTTCTTTGCTATCGACTTACCTGCAGAAATCCGCGAACAGATTATCCATTGGCGCGCCACACACTTCCCACCTGAGGCGGGACGTCCGGTCGCCGCCGATAATTTGCATCTGACTCTGGCATTTTTAGGCGAAGTGAGCGCCGAGAAAGAGAAGGCGCTTTCTCTTTTAGCCGGACGGATTCGTCAACCTGGTTTCACACTCACGCTTGATGACGCCGGACAATGGCTGCGTTCGCGTGTGGTGTGGTTAGGGATGCGTCAGCCGCCACGCGGCTTAATCCAGCTGGCGAATATGCTCCGTTCACAGGCTGCCCGCAGCGGTTGTTTTCAAAGCAATCGTCCGTTTCATCCACATATTACCTTATTGCGCGACGCCAGCGAGGCGGTGACAATCCCGCCGCCAGGTTTTAACTGGTCGTATGCGGTGACGGAGTTCACCCTTTACGCCTCCTCGTTTGCCCGTGGACGCACACGCTACACGCCGCTAAAACGCTGGGCGCTAACGCAATAA", - "dna_sequence_length": 531, - "functions": [ - "2'-5' RNA ligase" - ], - "id": "CDS_143", - "location": [ - [ - "NC_000913", - 162031, - "-", - 531 - ] - ], - "md5": "752a20b2ed6866eb3376ce489f5383a2", - "parent_gene": "", - "protein_md5": "e6f459b6a57cdee20fb777041dabb654", - "protein_translation": "MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ", - "protein_translation_length": 176, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0147" - ], - [ - "gene_synonym", - "yadO" - ], - [ - "gene_synonym", - "GeneID:944845" - ], - [ - "gene_synonym", - "hrpB" - ], - [ - "gene_synonym", - "NP_414690.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37024" - ], - [ - "gene_synonym", - "GI:162135893" - ], - [ - "gene_synonym", - "ASAP:ABE-0000510" - ], - [ - "gene_synonym", - "b0148" - ], - [ - "gene_synonym", - "EcoGene:EG12329" - ], - [ - "gene_synonym", - "JW0144" - ] - ], - "dna_sequence": "GTGTCGTCGTTGCCCGTTGCTGCCGTCTTACCTGAATTACTTACCGCTCTCGATTGTGCGCCGCAGGTATTATTAAGTGCGCCGACCGGGGCCGGGAAATCAACCTGGCTGCCGCTGCAACTGCTGGCGCATCCCGGCATTAACGGGAAAATTATCCTGCTGGAGCCGCGTCGTCTGGCGGCGCGTAACGTCGCGCAACGGCTGGCGGAGCTGCTTAACGAAAAGCCAGGCGATACCGTTGGCTACCGGATGCGTGCGCAAAACTGCGTCGGGCCGAATACCCGCCTGGAAGTGGTTACCGAAGGCGTGCTGACGCGCATGATCCAGCGTGACCCGGAACTGAGCGGTGTTGGACTGGTGATCCTTGATGAATTTCATGAGCGCAGCTTGCAGGCGGATTTGGCGTTGGCGCTGTTACTCGATGTGCAACAAGGTCTGCGTGATGACCTTAAACTGCTGATTATGTCGGCTACCCTGGACAACGACCGCTTGCAGCAAATGCTGCCAGAAGCGCCTGTCGTCATCTCAGAAGGGCGCTCGTTTCCGGTTGAACGCCGTTATTTACCGCTGCCCGCGCATCAGCGTTTTGACGATGCCGTTGCGGTAGCCACCGCTGAAATGCTGCGTCAGGAAAGCGGATCATTACTGTTATTTTTACCTGGCGTCGGAGAAATTCAGCGTGTGCAGGAACAACTGGCTTCGCGCATCGGCAGTGATGTATTGCTCTGCCCGCTGTATGGCGCGTTGTCGCTGAACGATCAGCGAAAAGCGATCCTCCCGGCACCGCAAGGGATGCGCAAAGTGGTGCTGGCGACCAATATTGCTGAAACCAGTTTAACCATTGAAGGTATTCGTCTGGTGGTGGATTGTGCCCAGGAGCGTGTGGCGCGTTTTGATCCGCGCACGGGGCTTACGCGACTGATTACTCAACGCGTTAGCCAGGCATCCATGACGCAGCGTGCCGGGCGCGCCGGGCGTCTGGAGCCGGGTATCAGCCTGCATTTAATCGCCAAAGAACAAGCAGAACGCGCCGCGGCGCAAAGTGAACCGGAGATCTTACAAAGCGATCTTTCCGGTTTGCTGATGGAATTACTGCAATGGGGATGCAGCGATCCGGCGCAGATGAGCTGGCTGGATCAACCGCCAGTAGTGAATCTACTGGCCGCGAAACGTCTGTTACAAATGCTGGGGGCACTGGAGGGTGAACGGCTTAGTGCGCAAGGGCAAAAAATGGCAGCGCTGGGTAACGATCCGCGTTTAGCGGCAATGCTGGTTAGCGCGAAGAACGACGACGAAGCTGCTACCGCGGCAAAAATTGCCGCCATTCTCGAAGAGCCGCCACGGATGGGCAATAGTGACCTGGGCGTGGCGTTTTCGCGCAATCAACCAGCCTGGCAGCAACGTAGTCAGCAACTGTTAAAACGCTTAAACGTACGTGGCGGTGAGGCAGACAGTTCGCTTATCGCGCCGCTACTTGCCGGGGCGTTTGCCGATCGCATTGCTCGTCGCCGTGGGCAAGATGGACGCTATCAACTGGCAAACGGCATGGGAGCGATGCTCGATGCCAACGACGCGCTAAGCCGCCACGAATGGTTGATCGCACCGTTATTATTGCAGGGCAGCGCCTCGCCGGATGCGCGGATTTTACTGGCGCTGCTGGTCGATATTGATGAGTTAGTACAACGCTGCCCGCAGCTGGTACAGCAGTCTGACACTGTGGAGTGGGATGACGCGCAAGGTACGCTGAAAGCCTGGCGTCGGCTACAAATCGGTCAGTTGACGGTGAAAGTGCAGCCGCTGGCGAAACCGTCAGAAGACGAGTTGCATCAGGCGATGCTTAATGGCATCCGTGATAAAGGTTTAAGCGTGCTCAACTGGACGGCGGAAGCGGAACAGCTACGCTTGCGTTTGTTATGCGCCGCAAAGTGGTTGCCGGAATATGACTGGCCAGCGGTTGATGATGAAAGTTTATTGGCAGCGCTGGAAACGTGGCTGCTGCCACATATGACTGGCGTACATTCACTACGCGGCCTGAAATCACTCGACATTTATCAGGCACTACGCGGATTACTTGATTGGGGAATGCAGCAACGTCTGGATAGTGAATTGCCTGCGCATTACACTGTGCCGACGGGAAGCCGGATCGCCATTCGTTATCATGAAGATAACCCGCCCGCGCTGGCGGTGAGAATGCAAGAGATGTTTGGCGAGGCCACCAATCCGACGATCGCCCAGGGGCGCGTGCCGCTGGTGCTGGAGTTGCTTTCACCTGCCCAAAGGCCATTACAAATCACACGAGATTTGAGCGACTTCTGGAAAGGAGCGTACCGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAA", 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"MSSLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGINGKIILLEPRRLAARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLFLPGVGEIQRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGISLHLIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRLLQMLGALEGERLSAQGQKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRMGNSDLGVAFSRNQPAWQQRSQQLLKRLNVRGGEADSSLIAPLLAGAFADRIARRRGQDGRYQLANGMGAMLDANDALSRHEWLIAPLLLQGSASPDARILLALLVDIDELVQRCPQLVQQSDTVEWDDAQGTLKAWRRLQIGQLTVKVQPLAKPSEDELHQAMLNGIRDKGLSVLNWTAEAEQLRLRLLCAAKWLPEYDWPAVDDESLLAALETWLLPHMTGVHSLRGLKSLDIYQALRGLLDWGMQQRLDSELPAHYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATNPTIAQGRVPLVLELLSPAQRPLQITRDLSDFWKGAYREVQKEMKGRYPKHVWPDDPANTAPTRRTKKYS", - "protein_translation_length": 809, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000516" - ], - [ - "gene_synonym", - "NP_414691.1" - ], - [ - "gene_synonym", - "GI:16128142" - ], - [ - "gene_synonym", - "EcoGene:EG10605" - ], - [ - "gene_synonym", - "ECK0148" - ], - [ - "gene_synonym", - "JW0145" - ], - [ - "gene_synonym", - "GeneID:944843" - ], - [ - "gene_synonym", - "pbpF" - ], - [ - "gene_synonym", - "mrcB" - ], - [ - "gene_synonym", - "b0149" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02919" - ], - [ - "gene_synonym", - "ponB" - ] - ], - "dna_sequence": "ATGGCCGGGAATGACCGCGAGCCAATTGGACGCAAAGGGAAACCGACGCGTCCGGTCAAACAAAAGGTAAGCCGTCGTCGTTACGAAGATGACGATGATTACGACGATTATGATGACTATGAGGATGAAGAACCGATGCCGCGCAAAGGTAAGGGCAAAGGCAAAGGGCGTAAGCCTCGTGGCAAACGCGGCTGGCTATGGCTACTGCTAAAACTGGCTATCGTTTTTGCCGTGCTGATCGCCATTTACGGCGTTTATCTCGATCAAAAAATTCGTAGCCGTATTGATGGCAAGGTCTGGCAACTGCCTGCGGCAGTTTATGGCCGAATGGTCAATCTTGAGCCAGACATGACCATCAGCAAGAACGAGATGGTGAAGCTGCTGGAGGCGACCCAGTATCGTCAGGTGTCGAAAATGACCCGTCCTGGCGAATTTACCGTGCAGGCCAACAGCATTGAGATGATTCGCCGTCCGTTTGATTTCCCGGACAGTAAAGAAGGACAGGTGCGCGCGCGTCTGACCTTTGATGGCGATCATCTGGCGACGATCGTCAATATGGAGAACAACCGTCAGTTCGGTTTCTTCCGTCTTGATCCGCGTCTGATCACCATGATCTCTTCGCCAAACGGTGAGCAGCGTCTGTTTGTGCCGCGCAGTGGTTTCCCGGATTTGCTGGTGGATACTTTGCTGGCGACAGAAGACCGTCATTTTTACGAGCATGATGGAATCAGTCTCTACTCAATCGGACGTGCGGTGCTGGCAAACCTGACCGCCGGACGCACGGTACAGGGTGCGAGTACGCTGACGCAACAGCTGGTGAAAAACCTGTTCCTCTCCAGCGAGCGTTCTTACTGGCGTAAAGCGAACGAAGCTTACATGGCGCTGATCATGGACGCGCGTTACAGCAAAGACCGTATTCTTGAGCTGTATATGAACGAGGTGTATCTCGGTCAGAGCGGCGACAACGAAATCCGCGGCTTCCCGCTGGCAAGCTTGTATTACTTTGGTCGCCCGGTAGAAGAGCTAAGCCTCGACCAGCAGGCGCTGTTAGTCGGTATGGTGAAAGGGGCGTCCATCTACAACCCGTGGCGTAACCCAAAACTGGCGCTGGAGCGACGTAATCTGGTGCTGCGTCTGCTGCAACAGCAACAGATTATTGATCAAGAACTCTATGACATGTTGAGTGCCCGTCCGCTGGGGGTTCAGCCGCGCGGTGGGGTGATCTCTCCTCAGCCAGCCTTTATGCAACTGGTGCGTCAGGAGCTGCAGGCAAAACTGGGCGATAAGGTAAAAGATCTCTCCGGCGTGAAGATCTTCACTACCTTTGACTCGGTGGCCCAGGACGCGGCAGAAAAAGCCGCCGTGGAAGGCATTCCGGCACTGAAGAAACAGCGTAAGTTGAGCGATCTTGAAACTGCGATTGTGGTCGTCGACCGCTTTAGTGGTGAAGTTCGTGCGATGGTCGGAGGTTCTGAGCCGCAGTTTGCGGGCTACAACCGTGCGATGCAGGCGCGTCGTTCGATTGGTTCCCTTGCAAAACCAGCGACTTATCTGACGGCCTTAAGCCAGCCGAAAATCTATCGTCTGAATACGTGGATTGCGGATGCGCCAATTGCGCTGCGTCAGCCGAATGGCCAGGTCTGGTCACCGCAGAATGATGACCGTCGTTATAGCGAAAGCGGCAGAGTGATGCTGGTGGATGCGTTGACCCGTTCGATGAACGTGCCGACGGTAAATCTGGGGATGGCGCTGGGGCTGCCTGCGGTTACGGAGACCTGGATTAAACTGGGCGTACCGAAAGATCAGTTGCATCCGGTTCCGGCAATGCTGCTGGGGGCGTTGAACTTAACGCCAATCGAAGTGGCGCAGGCATTCCAGACCATCGCCAGCGGTGGTAACCGTGCACCGCTTTCTGCGCTGCGTTCGGTAATCGCGGAAGATGGCAAAGTGCTGTATCAGAGCTTCCCGCAGGCGGAACGCGCTGTTCCGGCGCAGGCGGCGTATCTGACACTATGGACCATGCAGCAGGTGGTACAACGCGGTACGGGTCGTCAGCTTGGGGCGAAATACCCGAACCTGCATCTGGCAGGGAAAACAGGGACTACCAACAATAACGTAGATACCTGGTTTGCGGGCATTGACGGCAGCACGGTGACCATCACCTGGGTCGGCCGTGATAACAACCAGCCGACCAAACTGTATGGTGCCAGCGGGGCAATGTCGATTTATCAGCGTTATCTGGCTAACCAGACGCCAACGCCGCTGAATCTTGTTCCGCCAGAAGATATTGCAGATATGGGCGTGGACTACGACGGCAACTTTGTTTGCAGCGGTGGCATGCGTATCTTGCCGGTCTGGACCAGCGATCCGCAATCGCTGTGCCAGCAGAGCGAGATGCAGCAGCAGCCGTCAGGCAATCCGTTTGATCAGTCTTCTCAGCCGCAGCAACAGCCGCAACAGCAACCTGCTCAGCAAGAGCAGAAAGACAGCGACGGTGTAGCCGGTTGGATCAAGGATATGTTTGGTAGTAATTAA", - "dna_sequence_length": 2535, - "functions": [ - "fused glycosyl transferase and transpeptidase" - ], - "id": "CDS_145", - "location": [ - [ - "NC_000913", - 164730, - "+", - 2535 - ] - ], - "md5": "ff2d35bb16a32c1082f6bd2eda57a1c1", - "parent_gene": "", - "protein_md5": "254d97f5d497ed17e650772214fa6811", - "protein_translation": "MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEEPMPRKGKGKGKGRKPRGKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFDFPDSKEGQVRARLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYDMLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAAEKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQVWSPQNDDRRYSESGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAMSIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGMRILPVWTSDPQSLCQQSEMQQQPSGNPFDQSSQPQQQPQQQPAQQEQKDSDGVAGWIKDMFGSN", - "protein_translation_length": 844, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tonA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06971" - ], - [ - "gene_synonym", - "NP_414692.1" - ], - [ - "gene_synonym", - "GI:16128143" - ], - [ - "gene_synonym", - "ECK0149" - ], - [ - "gene_synonym", - "T1" - ], - [ - "gene_synonym", - "b0150" - ], - [ - "gene_synonym", - "ASAP:ABE-0000520" - ], - [ - "gene_synonym", - "fhuA" - ], - [ - "gene_synonym", - "EcoGene:EG10302" - ], - [ - "gene_synonym", - "JW0146" - ], - [ - "gene_synonym", - "GeneID:944856" - ] - ], - "dna_sequence": "ATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAAATCGCAGTTGTAGTAGCCACAGCGGTTAGCGGCATGTCTGTTTATGCACAGGCAGCGGTTGAACCGAAAGAAGACACTATCACCGTTACCGCTGCACCTGCGCCGCAAGAAAGCGCATGGGGGCCTGCTGCAACTATTGCGGCGCGACAGTCTGCTACCGGCACTAAAACCGATACGCCGATTCAAAAAGTGCCACAGTCTATTTCTGTTGTGACCGCCGAAGAGATGGCGCTGCATCAGCCGAAGTCGGTAAAAGAAGCGCTTAGCTACACGCCGGGTGTCTCTGTTGGTACGCGTGGCGCATCCAACACCTATGACCACCTGATCATTCGCGGCTTTGCGGCAGAAGGCCAAAGCCAGAATAACTATCTGAATGGCCTGAAGTTGCAGGGCAACTTCTATAACGATGCGGTCATTGACCCGTATATGCTGGAACGCGCTGAAATTATGCGTGGCCCGGTTTCCGTGCTTTACGGTAAAAGCAGTCCTGGCGGCCTGTTGAATATGGTCAGCAAGCGTCCGACCACCGAACCGCTGAAAGAAGTTCAGTTTAAAGCCGGTACTGACAGCCTGTTCCAGACTGGTTTTGACTTTAGCGATTCGTTGGATGATGACGGTGTTTACTCTTATCGCCTGACCGGTCTTGCGCGTTCTGCCAATGCCCAGCAGAAAGGGTCAGAAGAGCAGCGTTATGCTATTGCACCGGCGTTCACCTGGCGTCCGGATGATAAAACCAATTTTACCTTCCTTTCTTACTTCCAGAACGAGCCGGAAACCGGTTATTACGGCTGGTTGCCGAAAGAGGGAACCGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCTGGTTTGGTTACGACGACTCTGTGCCACTGCTCAATCTGTACAATCCGGTGAATACCGATTTCGACTTCAATGCCAAAGATCCGGCAAACTCCGGCCCTTACCGCATTCTGAATAAACAGAAACAAACGGGCGTTTATGTTCAGGATCAGGCGCAGTGGGATAAAGTGCTGGTCACCCTAGGCGGTCGTTATGACTGGGCAGATCAAGAATCTCTTAACCGCGTTGCCGGGACGACCGATAAACGTGATGACAAACAGTTTACCTGGCGTGGTGGTGTTAACTACCTGTTTGATAATGGTGTAACACCTTACTTCAGCTATAGCGAATCGTTTGAACCTTCTTCGCAAGTTGGGAAGGATGGTAATATTTTCGCACCGTCTAAAGGTAAGCAGTATGAAGTCGGCGTGAAATATGTACCGGAAGATCGTCCGATTGTAGTTACTGGTGCCGTGTATAATCTCACTAAAACCAACAACCTGATGGCGGACCCTGAGGGTTCCTTCTTCTCGGTTGAAGGTGGCGAGATCCGCGCACGTGGCGTAGAAATCGAAGCGAAAGCGGCGCTGTCGGCGAGTGTTAACGTAGTCGGTTCTTATACTTACACCGATGCGGAATACACCACCGATACTACCTATAAAGGCAATACGCCTGCACAGGTGCCAAAACACATGGCTTCGTTGTGGGCTGACTACACCTTCTTTGACGGTCCGCTTTCAGGTCTGACGCTGGGCACCGGTGGTCGTTATACTGGCTCCAGTTATGGTGATCCGGCTAACTCCTTTAAAGTGGGAAGTTATACGGTCGTGGATGCGTTAGTACGTTATGATCTGGCGCGAGTCGGCATGGCTGGCTCCAACGTGGCGCTGCATGTTAACAACCTGTTCGATCGTGAATACGTCGCCAGCTGCTTTAACACTTATGGCTGCTTCTGGGGCGCAGAACGTCAGGTCGTTGCAACCGCAACCTTCCGTTTCTAA", 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"MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITVTAAPAPQESAWGPAATIAARQSATGTKTDTPIQKVPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNFYNDAVIDPYMLERAEIMRGPVSVLYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPANAYSKQCAALAPADKGHYLARKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDFMRMRNDINAWFGYDDSVPLLNLYNPVNTDFDFNAKDPANSGPYRILNKQKQTGVYVQDQAQWDKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARVGMAGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVVATATFRF", - "protein_translation_length": 747, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0150" - ], - [ - "gene_synonym", - "GI:16128144" - ], - [ - "gene_synonym", - "b0151" - ], - [ - "gene_synonym", - "ASAP:ABE-0000522" - ], - [ - "gene_synonym", - "GeneID:945250" - ], - [ - "gene_synonym", - "fhuC" - ], - [ - "gene_synonym", - "EcoGene:EG10304" - ], - [ - "gene_synonym", - "NP_414693.1" - ], - [ - "gene_synonym", - "JW0147" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07821" - ] - ], - "dna_sequence": "ATGCAGGAATACACGAATCATTCCGATACCACTTTTGCACTGCGTAATATCTCCTTTCGTGTGCCCGGGCGCACGCTTTTGCATCCGCTGTCGTTAACCTTTCCTGCCGGGAAAGTGACCGGTCTGATTGGTCACAACGGTTCTGGTAAATCCACTCTGCTCAAAATGCTTGGCCGTCATCAGCCGCCGTCGGAAGGGGAGATTCTTCTTGATGCCCAACCGCTGGAAAGCTGGAGCAGCAAAGCGTTTGCCCGCAAAGTGGCTTATTTGCCGCAGCAGCTTCCTCCGGCAGAAGGGATGACCGTGCGTGAACTGGTGGCGATTGGTCGTTACCCGTGGCATGGCGCGCTGGGGCGCTTTGGGGCGGCAGATCGCGAAAAAGTCGAGGAAGCTATCTCGCTGGTTGGCTTAAAACCGCTGGCGCATCGGCTGGTCGATAGTCTCTCTGGCGGCGAACGTCAGCGGGCGTGGATCGCCATGCTGGTGGCGCAGGATAGCCGTTGTCTGTTGCTCGACGAACCGACCTCGGCGCTGGATATCGCCCACCAGGTTGATGTGCTGTCGCTGGTGCACCGTTTAAGTCAGGAGCGTGGCCTGACGGTCATTGCCGTGTTGCACGATATCAATATGGCGGCACGCTACTGTGATTATCTGGTCGCCCTGCGCGGCGGTGAAATGATTGCTCAGGGAACGCCTGCGGAAATTATGCGCGGCGAAACCCTCGAAATGATTTATGGCATCCCGATGGGTATTTTGCCGCATCCGGCGGGTGCTGCACCTGTGAGTTTTGTTTATTGA", - "dna_sequence_length": 798, - "functions": [ - "iron(3+)-hydroxamate import ABC transporter ATPase" - ], - "id": "CDS_147", - "location": [ - [ - "NC_000913", - 169778, - "+", - 798 - ] - ], - "md5": "86c9fe9d81edf7fa7a0f1c36094a0b28", - "parent_gene": "", - "protein_md5": "84438753d7cba90f0b21ff4792580f03", - "protein_translation": "MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPPAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLSLVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEIMRGETLEMIYGIPMGILPHPAGAAPVSFVY", - "protein_translation_length": 265, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0151" - ], - [ - "gene_synonym", - "NP_414694.1" - ], - [ - "gene_synonym", - "GeneID:947510" - ], - [ - "gene_synonym", - "GI:16128145" - ], - [ - "gene_synonym", - "fhuD" - ], - [ - "gene_synonym", - "JW0148" - ], - [ - "gene_synonym", - "b0152" - ], - [ - "gene_synonym", - "EcoGene:EG10305" - ], - [ - "gene_synonym", - "ASAP:ABE-0000524" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07822" - ] - ], - "dna_sequence": "ATGAGCGGCTTACCTCTTATTTCGCGCCGTCGACTGTTAACGGCGATGGCGCTTTCTCCGTTGTTATGGCAGATGAATACCGCCCACGCGGCGGCTATTGATCCCAATCGTATTGTGGCGCTGGAGTGGTTGCCGGTGGAATTACTGCTGGCGCTCGGCATCGTGCCTTACGGCGTGGCGGATACCATCAACTATCGCCTGTGGGTCAGCGAACCACCATTGCCGGACTCAGTGATCGACGTCGGTTTGCGCACAGAACCTAACCTTGAACTGCTGACCGAAATGAAACCATCGTTTATGGTCTGGTCGGCAGGATATGGCCCTTCACCAGAAATGCTGGCTCGTATTGCGCCGGGTCGCGGATTTAACTTCAGTGACGGCAAACAGCCGTTGGCGATGGCGCGTAAATCGCTGACGGAAATGGCAGATTTACTTAACCTGCAAAGCGCAGCGGAAACGCATTTAGCGCAATATGAAGACTTTATCCGCAGCATGAAACCCCGCTTTGTGAAGCGTGGTGCGCGTCCGTTATTGCTGACGACGCTTATCGATCCGCGCCATATGCTGGTCTTCGGTCCAAACAGCTTGTTCCAGGAAATTCTTGATGAGTACGGCATCCCAAATGCCTGGCAAGGGGAAACCAACTTCTGGGGCAGTACCGCCGTCAGTATCGATCGTCTGGCGGCGTATAAAGACGTTGATGTGCTCTGTTTTGATCACGACAACAGCAAAGACATGGATGCGCTAATGGCAACGCCGCTGTGGCAGGCCATGCCGTTTGTCCGCGCCGGACGCTTTCAGCGCGTACCTGCAGTCTGGTTTTATGGTGCGACGCTCTCGGCAATGCACTTTGTGCGCGTTCTGGATAACGCCATCGGAGGTAAAGCGTGA", - "dna_sequence_length": 891, - "functions": [ - "iron(3+)-hydroxamate import ABC transporter periplasmic binding protein" - ], - "id": "CDS_148", - "location": [ - [ - "NC_000913", - 170575, - "+", - 891 - ] - ], - "md5": "6127f8980ba16c80af58b458f6eab77f", - "parent_gene": "", - "protein_md5": "3dc6f035d807193f2faa8c058a64169a", - "protein_translation": "MSGLPLISRRRLLTAMALSPLLWQMNTAHAAAIDPNRIVALEWLPVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVWSAGYGPSPEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYEDFIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWGSTAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRAGRFQRVPAVWFYGATLSAMHFVRVLDNAIGGKA", - "protein_translation_length": 296, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0152" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06972" - ], - [ - "gene_synonym", - "GeneID:946890" - ], - [ - "gene_synonym", - "GI:16128146" - ], - [ - "gene_synonym", - "EcoGene:EG10303" - ], - [ - "gene_synonym", - "b0153" - ], - [ - "gene_synonym", - "JW0149" - ], - [ - "gene_synonym", - "NP_414695.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000526" - ], - [ - "gene_synonym", - "fhuB" - ] - ], - "dna_sequence": "GTGAGTAAACGAATTGCGCTTTTCCCGGCGTTATTGCTGGCGCTGTTAGTGATTGTCGCTACGGCGCTCACCTGGATGAACTTCTCGCAGGCGCTGCCGCGTAGCCAGTGGGCGCAGGCTGCCTGGTCGCCGGATATTGACGTCATCGAGCAGATGATTTTTCACTACAGCTTGTTGCCGCGTCTGGCGATTTCGCTGCTGGTGGGCGCGGGTCTGGGGCTGGTGGGCGTGCTGTTTCAGCAAGTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCGCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTGCGGCGCAATCAATCAGTTACTGGTTATCTTCCATCATGACCAACTGCAAAGCATGTTTCTGTGGAGCACTGGAACGCTGACGCAAACCGACTGGGGCGGCGTTGAGCGTTTATGGCCGCAGCTGCTGGGCGGTGTGATGCTGACGTTGCTGCTACTTCGTCCGTTAACCCTGATGGGGCTTGATGATGGCGTGGCGCGCAATCTCGGGCTGGCCTTGTCGCTTGCGCGTCTGGCAGCGCTGTCGCTGGCGATTGTCATCAGTGCGCTGCTGGTGAACGCTGTGGGGATTATCGGCTTTATCGGGTTGTTCGCGCCGCTGCTGGCAAAAATGCTGGGGGCGCGGCGTCTGCTGCCACGACTGATGCTGGCGTCGTTGATTGGTGCGCTGATCCTCTGGCTTTCCGATCAAATCATCCTCTGGCTGACTCGCGTGTGGATGGAAGTGTCCACCGGTTCGGTCACTGCGTTGATCGGTGCGCCGCTGCTACTGTGGCTGTTGCCGCGTTTACGCAGCATTAGCGCGCCGGATATGAAGGTCAACGATCGTGTCGCGGCTGAACGCCAACATGTGCTGGCGTTTGCCCTCGCGGGCGGCGTGCTGCTGTTGATGGCTGTGGTGGTGGCGCTGTCGTTTGGTCGTGATGCGCACGGCTGGACGTGGGCGAGCGGGGCGTTGCTCGAGGATTTAATGCCCTGGCGCTGGCCGCGAATTATGGCGGCGCTGTTTGCGGGCGTCATGCTGGCGGTGGCGGGCTGTATTATTCAGCGACTGACCGGAAACCCGATGGCAAGCCCGGAAGTGCTGGGGATTAGCTCCGGCGCGGCGTTTGGCGTGGTGTTGATGCTGTTTCTGGTGCCGGGTAATGCCTTTGGCTGGCTGTTACCTGCAGGCAGTCTCGGCGCGGCGGTGACGCTGTTGATCATTATGATCGCCGCCGGCCGCGGTGGATTTTCCCCACACCGTATGTTACTGGCGGGGATGGCGTTAAGCACCGCGTTCACCATGCTTTTGATGATGTTGCAGGCAAGTGGTGACCCGCGAATGGCGCAAGTGCTGACCTGGATTTCCGGTTCGACCTACAACGCGACCGATGCGCAGGTCTGGCGCACCGGAATTGTGATGGTGATTTTGCTGGCGATTACCCCGCTGTGCCGCCGCTGGCTGACCATTTTACCGCTGGGTGGTGATACCGCCCGAGCCGTAGGAATGGCGCTGACGCCGACGCGAATTGCGCTGCTGCTGTTAGCGGCTTGCCTGACGGCGACCGCGACGATGACTATTGGACCGTTGAGTTTTGTTGGTTTAATGGCACCGCATATTGCGCGGATGATGGGCTTTCGACGGACGATGCCACACATCGTAATTTCGGCGCTGGTGGGTGGTTTACTGCTGGTGTTCGCTGACTGGTGTGGGCGGATGGTGCTGTTTCCATTCCAGATCCCGGCGGGGCTGCTGTCAACCTTTATCGGCGCGCCATATTTTATCTATTTGTTGAGAAAGCAGAGCCGTTAA", - "dna_sequence_length": 1983, - "functions": [ - "iron(3+)-hydroxamate import ABC transporter permease" - ], - "id": "CDS_149", - "location": [ - [ - "NC_000913", - 171462, - "+", - 1983 - ] - ], - "md5": "5e4fdd67a72a4b3425bcd882df7839bb", - "parent_gene": "", - "protein_md5": "4fd99d79287b912ccee1d7f7d8b4a0c0", - "protein_translation": "MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSPDIDVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLGITVTTLWAIPGAMASQFAAQAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAINQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLDDGVARNLGLALSLARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPRLMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDMKVNDRVAAERQHVLAFALAGGVLLLMAVVVALSFGRDAHGWTWASGALLEDLMPWRWPRIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWLLPAGSLGAAVTLLIIMIAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQVLTWISGSTYNATDAQVWRTGIVMVILLAITPLCRRWLTILPLGGDTARAVGMALTPTRIALLLLAACLTATATMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFADWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR", - "protein_translation_length": 660, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "popC" - ], - [ - "gene_synonym", - "ECK0153" - ], - [ - "gene_synonym", - "gsa?" - ], - [ - "gene_synonym", - "NP_414696.1" - ], - [ - "gene_synonym", - "hemL" - ], - [ - "gene_synonym", - "GI:16128147" - ], - [ - "gene_synonym", - "GeneID:946892" - ], - [ - "gene_synonym", - "b0154" - ], - [ - "gene_synonym", - "JW0150" - ], - [ - "gene_synonym", - "ASAP:ABE-0000529" - ], - [ - "gene_synonym", - "EcoGene:EG10432" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23893" - ] - ], - "dna_sequence": "ATGAGTAAGTCTGAAAATCTTTACAGCGCAGCGCGCGAGCTGATCCCTGGCGGTGTGAACTCCCCTGTTCGCGCCTTTACTGGCGTGGGCGGCACTCCACTGTTTATCGAAAAAGCGGACGGCGCTTATCTGTACGATGTTGATGGCAAAGCCTATATCGATTATGTCGGTTCCTGGGGGCCGATGGTGCTGGGCCATAACCATCCGGCAATCCGCAATGCCGTGATTGAAGCCGCCGAGCGTGGTTTAAGCTTTGGTGCACCAACCGAAATGGAAGTGAAAATGGCGCAACTGGTGACCGAACTGGTCCCGACCATGGATATGGTGCGCATGGTGAACTCCGGCACTGAAGCGACCATGAGCGCCATCCGCCTGGCCCGTGGTTTTACCGGTCGCGACAAAATTATTAAATTTGAAGGGTGTTACCATGGTCACGCTGACTGCCTGCTGGTGAAAGCCGGTTCTGGCGCACTCACGTTAGGCCAGCCAAACTCGCCGGGCGTTCCGGCAGATTTCGCCAAATATACCTTAACCTGTACTTATAATGATCTGGCTTCTGTACGCGCCGCATTTGAGCAATACCCGCAAGAGATTGCCTGTATTATCGTCGAGCCGGTGGCAGGCAATATGAACTGTGTTCCGCCGCTGCCAGAGTTCCTGCCAGGTCTGCGCGCGCTGTGCGACGAATTTGGCGCGTTGCTGATCATCGATGAAGTGATGACCGGTTTCCGCGTAGCGCTAGCTGGCGCACAGGATTATTACGGCGTAGTGCCAGATTTAACCTGCCTCGGCAAAATCATCGGCGGTGGAATGCCGGTAGGCGCATTCGGTGGTCGTCGTGATGTAATGGATGCGCTGGCCCCGACGGGTCCGGTCTATCAGGCGGGTACGCTTTCCGGTAACCCGATTGCGATGGCAGCGGGTTTCGCCTGTCTGAATGAAGTCGCGCAGCCGGGCGTTCACGAAACGCTGGATGAGCTGACAACACGTCTGGCAGAAGGTCTGCTGGAAGCGGCAGAAGAAGCCGGAATTCCGCTGGTCGTTAACCACGTTGGCGGCATGTTCGGTATTTTCTTTACCGACGCCGAGTCCGTGACGTGCTATCAGGATGTGATGGCCTGTGACGTGGAACGCTTTAAGCGTTTCTTCCATATGATGCTGGACGAAGGTGTTTACCTGGCACCGTCAGCGTTTGAAGCGGGCTTTATGTCCGTGGCGCACAGCATGGAAGATATCAATAACACCATCGATGCTGCACGTCGGGTGTTTGCGAAGTTGTGA", - "dna_sequence_length": 1281, - "functions": [ - "glutamate-1-semialdehyde aminotransferase (aminomutase)" - ], - "id": "CDS_150", - "location": [ - [ - "NC_000913", - 174882, - "-", - 1281 - ] - ], - "md5": "4dd52cdb04dde0f811807638d65fe6ea", - "parent_gene": "", - "protein_md5": "c93a72a28bd021655bc2221b16efd538", - "protein_translation": "MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPADFAKYTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLLEAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVYLAPSAFEAGFMSVAHSMEDINNTIDAARRVFAKL", - "protein_translation_length": 426, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128148" - ], - [ - "gene_synonym", - "clcA" - ], - [ - "gene_synonym", - "NP_414697.1" - ], - [ - "gene_synonym", - "ECK0154" - ], - [ - "gene_synonym", - "JW5012" - ], - [ - "gene_synonym", - "GeneID:946715" - ], - [ - "gene_synonym", - "EcoGene:EG12331" - ], - [ - "gene_synonym", - "ASAP:ABE-0000533" - ], - [ - "gene_synonym", - "b0155" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37019" - ], - [ - "gene_synonym", - "yadQ" - ], - [ - "gene_synonym", - "eriC" - ] - ], - "dna_sequence": "ATGAAAACTGATACTCCCTCTTTAGAAACACCGCAGGCCGCGCGCCTGCGACGCAGACAACTGATTCGCCAACTTCTTGAGCGCGATAAAACCCCGTTAGCCATTTTGTTTATGGCGGCAGTCGTCGGCACGCTTGTTGGGCTGGCAGCGGTTGCTTTTGACAAAGGTGTCGCCTGGTTGCAGAACCAACGTATGGGGGCGCTGGTACATACTGCTGATAATTATCCGCTTCTGTTAACCGTCGCTTTTCTCTGTTCGGCGGTGCTGGCGATGTTTGGCTACTTTTTGGTGCGCAAATACGCGCCGGAAGCAGGTGGTTCGGGGATCCCGGAAATTGAAGGGGCGCTGGAAGATCAACGTCCCGTTCGCTGGTGGCGTGTATTGCCGGTGAAGTTCTTTGGCGGGCTGGGGACACTCGGCGGAGGCATGGTGTTGGGGCGCGAAGGGCCAACCGTGCAGATCGGCGGTAACATTGGCCGTATGGTGCTTGATATTTTCCGCCTGAAAGGTGACGAAGCTCGCCATACGCTGCTGGCAACCGGTGCTGCTGCGGGGCTGGCTGCGGCCTTTAACGCGCCGCTGGCGGGTATTTTGTTTATTATCGAAGAGATGCGTCCGCAGTTTCGCTATACGTTAATTTCGATTAAAGCGGTATTTATTGGTGTCATTATGTCGACCATTATGTACCGGATTTTTAATCATGAAGTTGCGTTGATTGACGTCGGTAAACTTTCTGATGCGCCGCTTAATACGCTGTGGCTTTATCTGATCCTCGGTATTATTTTTGGCATTTTCGGCCCTATTTTTAATAAATGGGTGCTGGGGATGCAGGATTTGCTGCACCGTGTGCACGGCGGCAATATTACCAAATGGGTGCTAATGGGCGGTGCGATTGGCGGTCTGTGTGGATTGCTGGGGTTTGTGGCACCAGCAACGTCGGGCGGCGGTTTTAACCTGATTCCTATCGCTACCGCGGGGAATTTCAGCATGGGAATGCTGGTGTTTATCTTCGTCGCGCGGGTCATTACCACCTTACTCTGCTTCTCTTCCGGCGCGCCGGGCGGTATTTTTGCCCCGATGCTGGCGCTGGGTACTGTGCTGGGAACCGCTTTCGGAATGGTTGCCGTTGAGCTGTTTCCGCAATATCACCTTGAGGCGGGGACGTTTGCTATTGCCGGAATGGGGGCATTACTGGCGGCATCTATTCGCGCGCCGTTAACGGGGATCATTCTGGTTCTGGAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAACCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAGAATACTTGA", - "dna_sequence_length": 1422, - "functions": [ - "H(+)/Cl(-) exchange transporter" - ], - "id": "CDS_151", - "location": [ - [ - "NC_000913", - 175107, - "+", - 1422 - ] - ], - "md5": "0c1b238e192311e7b940cee6475a017b", - "parent_gene": "", - "protein_md5": "cc50097b245098fa32ff05d39746678f", - "protein_translation": "MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILARTLAKQEAEQLARSKAASASENT", - "protein_translation_length": 473, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128149" - ], - [ - "gene_synonym", - "ECK0155" - ], - [ - "gene_synonym", - "NP_414698.1" - ], - [ - "gene_synonym", - "erpA" - ], - [ - "gene_synonym", - "ASAP:ABE-0000538" - ], - [ - "gene_synonym", - "GeneID:944857" - ], - [ - "gene_synonym", - "b0156" - ], - [ - "gene_synonym", - "yadR" - ], - [ - "gene_synonym", - "JW0152" - ], - [ - "gene_synonym", - "EcoGene:EG12332" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACC3" - ] - ], - "dna_sequence": "ATGAGTGATGACGTAGCACTGCCGCTGGAGTTTACCGACGCAGCAGCCAACAAAGTTAAAAGCCTGATCGCTGACGAAGATAACCCGAATCTGAAATTACGCGTGTATATCACCGGTGGCGGTTGCAGCGGCTTCCAGTATGGTTTCACCTTTGATGATCAGGTGAACGAAGGCGATATGACCATCGAAAAACAGGGCGTTGGCCTGGTGGTTGATCCGATGAGCCTGCAATATCTGGTCGGCGGTTCCGTTGATTATACCGAAGGTCTGGAAGGTTCTCGTTTCATCGTGACCAACCCGAACGCGAAAAGCACCTGCGGTTGCGGTTCTTCCTTTAGTATCTAA", - "dna_sequence_length": 345, - "functions": [ - "iron-sulfur cluster insertion protein" - ], - "id": "CDS_152", - "location": [ - [ - "NC_000913", - 176610, - "+", - 345 - ] - ], - "md5": "d9a82c16a8d0b2e94ddad0ce6510c7f5", - "parent_gene": "", - "protein_md5": "f820d44147862f2bcd9e5cf6b9f34043", - "protein_translation": "MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSGFQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNAKSTCGCGSSFSI", - "protein_translation_length": 114, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414699.1" - ], - [ - "gene_synonym", - "ECK0156" - ], - [ - "gene_synonym", - "ASAP:ABE-0000540" - ], - [ - "gene_synonym", - "GI:16128150" - ], - [ - "gene_synonym", - "GeneID:949062" - ], - [ - "gene_synonym", - "b0157" - ], - [ - "gene_synonym", - "yadS" - ], - [ - "gene_synonym", - "JW0153" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFP0" - ], - [ - "gene_synonym", - "EcoGene:EG12333" - ] - ], - "dna_sequence": "ATGCTCGTCTATTGGCTGGATATAGTCGGCACAGCGGTATTTGCCATCTCCGGCGTTTTGTTAGCCGGAAAATTGCGTATGGACCCTTTTGGTGTTCTGGTACTGGGCGTGGTAACCGCAGTAGGCGGCGGGACAATTCGCGACATGGCGCTGGATCACGGCCCGGTATTTTGGGTGAAAGATCCCACCGATCTGGTCGTTGCAATGGTCACCAGCATGCTGACCATCGTGCTGGTGCGCCAGCCAAGACGCTTACCAAAATGGATGTTGCCGGTGCTGGACGCCGTTGGTCTGGCGGTGTTTGTCGGCATTGGCGTGAATAAAGCCTTTAATGCGGAAGCCGGTCCGTTAATCGCGGTTTGTATGGGCGTCATTACTGGCGTTGGCGGCGGGATCATTCGTGATGTTCTGGCCCGCGAAATCCCCATGATTTTACGTACAGAAATCTACGCAACTGCCTGTATTATCGGCGGTATTGTCCACGCTACGGCTTATTACACATTTTCCGTACCACTGGAAACAGCCAGTATGATGGGCATGGTCGTGACGCTATTGATTCGGCTGGCGGCTATTCGTTGGCATCTTAAGCTACCGACGTTTGCGCTGGATGAGAATGGGCGTTGA", - "dna_sequence_length": 624, - "functions": [ - "UPF0126 family inner membrane protein" - ], - "id": "CDS_153", - "location": [ - [ - "NC_000913", - 177624, - "-", - 624 - ] - ], - "md5": "85cd1de5c83c63e2c96c6acd0b735f2e", - "parent_gene": "", - "protein_md5": "eecf6b755b9a9b4068715fd9ae59dc6f", - "protein_translation": "MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFVGIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR", - "protein_translation_length": 207, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0157" - ], - [ - "gene_synonym", - "ASAP:ABE-0000542" - ], - [ - "gene_synonym", - "GI:16128151" - ], - [ - "gene_synonym", - "btuF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37028" - ], - [ - "gene_synonym", - "EcoGene:EG12334" - ], - [ - "gene_synonym", - "b0158" - ], - [ - "gene_synonym", - "NP_414700.1" - ], - [ - "gene_synonym", - "JW0154" - ], - [ - "gene_synonym", - "yadT" - ], - [ - "gene_synonym", - "GeneID:947574" - ] - ], - "dna_sequence": "ATGGCTAAGTCACTGTTCAGGGCGCTGGTCGCCCTGTCTTTTCTTGCGCCACTGTGGCTCAACGCCGCGCCGCGCGTCATCACGCTTTCTCCCGCCAACACTGAACTTGCCTTTGCCGCCGGGATCACGCCGGTTGGGGTCAGCAGCTATTCCGACTATCCTCCACAAGCGCAAAAGATTGAGCAGGTTTCCACCTGGCAGGGGATGAATCTGGAACGCATTGTCGCGCTGAAACCCGATCTGGTGATTGCCTGGCGTGGAGGTAATGCCGAGCGGCAGGTTGACCAGCTGGCTTCGCTGGGAATAAAAGTGATGTGGGTCGATGCGACAAGCATTGAACAAATTGCCAATGCGTTACGTCAACTGGCCCCCTGGAGTCCGCAACCAGACAAGGCCGAACAAGCCGCGCAATCCCTGCTGGATCAGTACGCGCAATTGAAAGCGCAATATGCTGATAAACCTAAAAAACGTGTTTTTCTGCAATTCGGCATTAATCCGCCATTTACCAGTGGAAAAGAGTCGATTCAGAACCAGGTACTCGAAGTTTGTGGCGGAGAAAACATCTTTAAAGACAGCCGGGTTCCCTGGCCGCAAGTTAGCCGCGAACAGGTGTTAGCACGCTCGCCACAGGCGATTGTCATTACAGGCGGACCGGACCAAATTCCTAAAATCAAACAATACTGGGGTGAACAGCTCAAAATTCCCGTTATTCCTCTCACGAGTGACTGGTTTGAACGTGCAAGCCCACGTATTATCCTCGCTGCACAACAGCTCTGTAATGCGCTTTCACAGGTAGATTAG", - "dna_sequence_length": 801, - "functions": [ - "vitamin B12 ABC transporter periplasmic binding protein" - ], - "id": "CDS_154", - "location": [ - [ - "NC_000913", - 178462, - "-", - 801 - ] - ], - "md5": "c3a406ff61a6f8acdb950854ee6897a7", - "parent_gene": "", - "protein_md5": "ef641f630db987af456f7d54f7bbfb7a", - "protein_translation": "MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITPVGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGPDQIPKIKQYWGEQLKIPVIPLTSDWFERASPRIILAAQQLCNALSQVD", - "protein_translation_length": 266, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000545" - ], - [ - "gene_synonym", - "GI:16128152" - ], - [ - "gene_synonym", - "ECK0158" - ], - [ - "gene_synonym", - "yadA" - ], - [ - "gene_synonym", - "mtnN" - ], - [ - "gene_synonym", - "EcoGene:EG11090" - ], - [ - "gene_synonym", - "pfs" - ], - [ - "gene_synonym", - "mtn" - ], - [ - "gene_synonym", - "b0159" - ], - [ - "gene_synonym", - "GeneID:948542" - ], - [ - "gene_synonym", - "JW0155" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF12" - ], - [ - "gene_synonym", - "NP_414701.1" - ] - ], - "dna_sequence": "ATGAAAATCGGCATCATTGGTGCAATGGAAGAAGAAGTTACGCTGCTGCGTGACAAAATCGAAAACCGTCAAACTATCAGTCTCGGCGGTTGCGAAATCTATACCGGCCAACTGAATGGAACCGAGGTTGCGCTTCTGAAATCGGGCATCGGTAAAGTCGCTGCGGCGCTGGGTGCCACTTTGCTGTTGGAACACTGCAAGCCAGATGTGATTATTAACACCGGTTCTGCCGGTGGCCTGGCACCAACGTTGAAAGTGGGCGATATCGTTGTCTCGGACGAAGCACGTTATCACGACGCGGATGTCACGGCATTTGGTTATGAATACGGTCAGTTACCAGGCTGTCCGGCAGGCTTTAAAGCTGACGATAAACTGATCGCTGCCGCTGAGGCCTGCATTGCCGAACTGAATCTTAACGCTGTACGTGGCCTGATTGTTAGCGGCGACGCTTTCATCAACGGTTCTGTTGGTCTGGCGAAAATCCGCCACAACTTCCCACAGGCCATTGCTGTAGAGATGGAAGCGACGGCAATCGCCCATGTCTGCCACAATTTCAACGTCCCGTTTGTTGTCGTACGCGCCATCTCCGACGTGGCCGATCAACAGTCTCATCTTAGCTTCGATGAGTTCCTGGCTGTTGCCGCTAAACAGTCCAGCCTGATGGTTGAGTCACTGGTGCAGAAACTTGCACATGGCTAA", - "dna_sequence_length": 699, - "functions": [ - "5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase" - ], - "id": "CDS_155", - "location": [ - [ - "NC_000913", - 179153, - "-", - 699 - ] - ], - "md5": "1925039ff6d5a29cd1f4a8052f2788b7", - "parent_gene": "", - "protein_md5": "0e6003b175c65911bc68fb215270015c", - "protein_translation": "MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKLAHG", - "protein_translation_length": 232, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128153" - ], - [ - "gene_synonym", - "NP_414702.1" - ], - [ - "gene_synonym", - "ECK0159" - ], - [ - "gene_synonym", - "optA" - ], - [ - "gene_synonym", - "ASAP:ABE-0000548" - ], - [ - "gene_synonym", - "GeneID:947177" - ], - [ - "gene_synonym", - "EcoGene:EG10225" - ], - [ - "gene_synonym", - "dgt" - ], - [ - "gene_synonym", - "b0160" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15723" - ], - [ - "gene_synonym", - "JW0156" - ] - ], - "dna_sequence": "ATGGCACAGATTGATTTCCGAAAAAAAATAAACTGGCATCGTCGTTACCGTTCACCGCAGGGCGTTAAAACCGAACATGAGATCCTGCGGATCTTCGAGAGCGATCGCGGGCGTATCATCAACTCTCCGGCAATTCGTCGTCTGCAACAAAAGACCCAGGTTTTTCCACTGGAGCGCAATGCCGCCGTGCGCACGCGTCTTACCCACTCGATGGAAGTCCAGCAGGTGGGGCGCTACATCGCCAAAGAAATTTTAAGCCGTCTGAAAGAGCTTAAATTACTGGAAGCATACGGCCTGGATGAACTGACCGGTCCCTTTGAAAGCATTGTTGAGATGTCATGCCTGATGCACGATATCGGCAATCCGCCGTTTGGTCATTTTGGCGAAGCGGCGATAAATGACTGGTTTCGCCAACGTTTGCACCCGGAAGATGCCGAAAGCCAGCCTCTGACTGACGATCGCTGCAGCGTGGCGGCACTACGTTTACGGGACGGGGAAGAACCGCTTAACGAGCTGCGGCGCAAGATTCGTCAGGACTTATGTCATTTTGAGGGGAATGCACAAGGCATTCGCCTGGTGCATACATTGATGCGGATGAATCTCACCTGGGCACAGGTTGGCGGTATTTTAAAATATACCCGTCCGGCGTGGTGGCGTGGCGAAACGCCTGAGACACATCACTATTTAATGAAAAAGCCGGGTTATTATCTTTCTGAAGAAGCCTATATTGCCCGGTTGCGTAAAGAACTTAATTTGGCGCTTTACAGTCGTTTTCCATTAACGTGGATTATGGAAGCTGCCGACGACATCTCCTATTGTGTGGCAGACCTTGAAGATGCGGTAGAGAAAAGAATATTTACCGTTGAGCAGCTTTATCATCATTTGCACGAAGCGTGGGGCCAGCATGAGAAAGGTTCGCTCTTTTCGCTGGTGGTTGAAAATGCCTGGGAAAAATCACGCTCAAATAGTTTAAGCCGCAGTACGGAAGATCAGTTTTTTATGTATTTACGGGTAAACACCCTAAATAAACTGGTACCCTACGCGGCACAACGATTTATTGATAATCTGCCTGCGATTTTCGCCGGAACGTTTAATCATGCATTATTGGAAGATGCCAGCGAATGCAGCGATCTTCTTAAGCTATATAAAAATGTCGCTGTAAAACATGTGTTTAGCCATCCAGATGTCGAGCGGCTTGAATTGCAGGGCTATCGGGTCATTAGCGGATTATTAGAGATTTATCGTCCTTTATTAAGCCTGTCGTTATCAGACTTTACTGAACTGGTAGAAAAAGAACGGGTGAAACGTTTCCCTATTGAATCGCGCTTATTCCACAAACTCTCGACGCGCCATCGGCTGGCCTATGTCGAGGCTGTCAGTAAATTACCGTCAGATTCTCCTGAGTTTCCGCTATGGGAATATTATTACCGTTGCCGCCTGCTGCAGGATTATATCAGCGGTATGACCGACCTCTATGCGTGGGATGAATACCGACGTCTGATGGCCGTAGAACAATAA", - "dna_sequence_length": 1518, - "functions": [ - "deoxyguanosine triphosphate triphosphohydrolase" - ], - "id": "CDS_156", - "location": [ - [ - "NC_000913", - 179237, - "+", - 1518 - ] - ], - "md5": "aebc33a007f4bb80fec3db75ebd4c066", - "parent_gene": "", - "protein_md5": "2af0589e277b7c428f84a587d715d24c", - "protein_translation": "MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPAIRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEILSRLKELKLLEAYGLDELTGPFESIVEMSCLMHDIGNPPFGHFGEAAINDWFRQRLHPEDAESQPLTDDRCSVAALRLRDGEEPLNELRRKIRQDLCHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWWRGETPETHHYLMKKPGYYLSEEAYIARLRKELNLALYSRFPLTWIMEAADDISYCVADLEDAVEKRIFTVEQLYHHLHEAWGQHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFMYLRVNTLNKLVPYAAQRFIDNLPAIFAGTFNHALLEDASECSDLLKLYKNVAVKHVFSHPDVERLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKERVKRFPIESRLFHKLSTRHRLAYVEAVSKLPSDSPEFPLWEYYYRCRLLQDYISGMTDLYAWDEYRRLMAVEQ", - "protein_translation_length": 505, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "degP" - ], - [ - "gene_synonym", - "GeneID:947139" - ], - [ - "gene_synonym", - "ASAP:ABE-0000551" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C0V0" - ], - [ - "gene_synonym", - "htrA" - ], - [ - "gene_synonym", - "EcoGene:EG10463" - ], - [ - "gene_synonym", - "ptd" - ], - [ - "gene_synonym", - "NP_414703.1" - ], - [ - "gene_synonym", - "GI:16128154" - ], - [ - "gene_synonym", - "b0161" - ], - [ - "gene_synonym", - "ECK0160" - ], - [ - "gene_synonym", - "JW0157" - ] - ], - "dna_sequence": "ATGAAAAAAACCACATTAGCACTGAGTGCACTGGCTCTGAGTTTAGGTTTGGCGTTATCTCCGCTCTCTGCAACGGCGGCTGAGACTTCTTCAGCAACGACAGCCCAGCAGATGCCAAGCCTTGCACCGATGCTCGAAAAGGTGATGCCTTCAGTGGTCAGCATTAACGTAGAAGGTAGCACAACCGTTAATACGCCGCGTATGCCGCGTAATTTCCAGCAGTTCTTCGGTGATGATTCTCCGTTCTGCCAGGAAGGTTCTCCGTTCCAGAGCTCTCCGTTCTGCCAGGGTGGCCAGGGCGGTAATGGTGGCGGCCAGCAACAGAAATTCATGGCGCTGGGTTCCGGCGTCATCATTGATGCCGATAAAGGCTATGTCGTCACCAACAACCACGTTGTTGATAACGCGACGGTCATTAAAGTTCAACTGAGCGATGGCCGTAAGTTCGACGCGAAGATGGTTGGCAAAGATCCGCGCTCTGATATCGCGCTGATCCAAATCCAGAACCCGAAAAACCTGACCGCAATTAAGATGGCGGATTCTGATGCACTGCGCGTGGGTGATTACACCGTAGCGATTGGTAACCCGTTTGGTCTGGGCGAGACGGTAACTTCCGGGATTGTCTCTGCGCTGGGGCGTAGCGGCCTGAATGCCGAAAACTACGAAAACTTCATCCAGACCGATGCAGCGATCAACCGTGGTAACTCCGGTGGTGCGCTGGTTAACCTGAACGGCGAACTGATCGGTATCAACACCGCGATCCTCGCACCGGACGGCGGCAACATCGGTATCGGTTTTGCTATCCCGAGTAACATGGTGAAAAACCTGACCTCGCAGATGGTGGAATACGGCCAGGTGAAACGCGGTGAGCTGGGTATTATGGGGACTGAGCTGAACTCCGAACTGGCGAAAGCGATGAAAGTTGACGCCCAGCGCGGTGCTTTCGTAAGCCAGGTTCTGCCTAATTCCTCCGCTGCAAAAGCGGGCATTAAAGCGGGTGATGTGATCACCTCACTGAACGGTAAGCCGATCAGCAGCTTTGCCGCACTGCGTGCTCAGGTGGGTACTATGCCGGTAGGCAGCAAACTGACCCTGGGCTTACTGCGCGACGGTAAGCAGGTTAACGTGAACCTGGAACTGCAGCAGAGCAGCCAGAATCAGGTTGATTCCAGCTCCATCTTCAACGGCATTGAAGGCGCTGAGATGAGCAACAAAGGCAAAGATCAGGGCGTGGTAGTGAACAACGTGAAAACGGGCACTCCGGCTGCGCAGATCGGCCTGAAGAAAGGTGATGTGATTATTGGCGCGAACCAGCAGGCAGTGAAAAACATCGCTGAACTGCGTAAAGTTCTCGACAGCAAACCGTCTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTACCTGTTAATGCAGTAA", 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"gene_synonym", - "GI:90111093" - ], - [ - "gene_synonym", - "JW5013" - ], - [ - "gene_synonym", - "NP_414704.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37047" - ], - [ - "gene_synonym", - "yaeG" - ], - [ - "gene_synonym", - "sdaR" - ], - [ - "gene_synonym", - "GeneID:944860" - ], - [ - "gene_synonym", - "EcoGene:EG12335" - ], - [ - "gene_synonym", - "b0162" - ], - [ - "gene_synonym", - "ECK0161" - ] - ], - "dna_sequence": "ATGGCTGGCTGGCATCTTGATACCAAAATGGCGCAGGATATCGTGGCACGTACCATGCGCATCATCGATACCAATATCAACGTAATGGATGCCCGTGGGCGAATTATCGGCAGCGGCGATCGTGAGCGTATTGGTGAATTGCACGAAGGTGCATTGCTGGTACTTTCACAGGGACGAGTCGTCGATATCGATGACGCGGTAGCACGTCATCTGCACGGTGTGCGGCAGGGGATTAATCTACCGTTACGGCTGGAAGGTGAAATTGTCGGCGTAATTGGCCTGACAGGTGAACCAGAGAATCTGCGTAAATATGGCGAACTGGTCTGCATGACGGCTGAAATGATGCTGGAACAGTCGCGGTTGATGCACTTGTTGGCGCAGGATAGCCGTTTGCGGGAAGAACTGGTGATGAACCTGATTCAGGCAGAGGAGAATACTCCCGCACTTACTGAATGGGCGCAACGGCTGGGGATCGATCTCAATCAACCGCGAGTGGTGGCTATTGTTGAGGTCGACAGCGGTCAGCTTGGCGTGGACAGCGCAATGGCGGAGTTACAACAACTGCAAAACGCGCTGACTACGCCCGAGCGTAATAATCTGGTGGCGATTGTCTCGCTAACCGAAATGGTGGTGTTGAAACCGGCGTTGAACTCTTTTGGGCGCTGGGATGCAGAAGATCATCGTAAGCGAGTTGAACAACTGATTACCCGCATGAAAGAGTACGGCCAGCTGCGTTTTCGCGTTTCACTGGGCAACTATTTTACCGGTCCTGGCAGTATTGCCCGATCCTATCGTACGGCGAAAACGACGATGGTGGTGGGTAAACAGCGGATGCCAGAAAGTCGCTGCTATTTTTATCAGGATCTGATGTTACCTGTGTTACTCGACAGTTTGCGTGGCGACTGGCAGGCCAACGAACTGGCGCGACCGCTGGCGCGGCTGAAAACGATGGACAATAACGGCTTGCTGCGACGAACGCTGGCGGCGTGGTTTCGCCACAATGTGCAACCGCTGGCAACGTCAAAGGCGTTGTTTATTCATCGTAATACCCTGGAGTATCGGCTTAATCGTATATCGGAACTGACCGGGCTTGATTTGGGCAATTTTGATGACAGGTTGCTGCTGTATGTGGCGTTACAACTGGATGAAGAGCGGTAG", 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"JW0159" - ], - [ - "gene_synonym", - "GeneID:947044" - ], - [ - "gene_synonym", - "NP_414705.1" - ], - [ - "gene_synonym", - "ECK0162" - ], - [ - "gene_synonym", - "EcoGene:EG12336" - ], - [ - "gene_synonym", - "b0163" - ], - [ - "gene_synonym", - "yaeH" - ] - ], - "dna_sequence": "ATGTACGACAATCTGAAAAGTCTGGGTATTACCAATCCTGAAGAAATTGATCGTTACAGCCTCCGGCAGGAAGCCAACAACGATATTCTGAAAATCTATTTCCAGAAAGACAAAGGCGAGTTTTTCGCCAAGAGCGTTAAGTTTAAATATCCGCGTCAGCGTAAAACGGTCGTCGCTGATGGTGTGGGTCAGGGTTATAAAGAAGTCCAGGAAATCAGCCCGAATCTACGGTATATCATTGATGAGCTTGATCAAATCTGCCAGCGTGACCGCAGCGAAGTTGATCTTAAGCGTAAGATCCTCGACGACTTACGTCACCTGGAGTCAGTCGTAACCAATAAGATCAGCGAGATTGAAGCCGATCTGGAAAAACTAACGCGTAAATAA", - "dna_sequence_length": 387, - "functions": [ - "UPF0325 family protein" - ], - "id": "CDS_159", - "location": [ - [ - "NC_000913", - 184095, - "-", - 387 - ] - ], - "md5": "3ddc2a70f3d3f6412b0a71b0b16df5e2", - "parent_gene": "", - "protein_md5": "4ddf5054a88b91559aee6478ea4a0b69", - "protein_translation": "MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAKSVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILDDLRHLESVVTNKISEIEADLEKLTRK", - "protein_translation_length": 128, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111094" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37049" - ], - [ - "gene_synonym", - "yaeI" - ], - [ - "gene_synonym", - "ASAP:ABE-0000559" - ], - [ - "gene_synonym", - "NP_414706.2" - ], - [ - "gene_synonym", - "JW5014" - ], - [ - "gene_synonym", - "GeneID:945002" - ], - [ - "gene_synonym", - "ECK0163" - ], - [ - "gene_synonym", - "EcoGene:EG12337" - ], - [ - "gene_synonym", - "b0164" - ] - ], - "dna_sequence": "ATGATTTCACGCCGCCGATTTTTGCAGGCTACTGCCGCGACGATAGCCACGAGCTCAGGTTTCGGTTATATGCATTACTGTGAGCCAGGCTGGTTTGAATTAATCCGTCACCGCCTCGCCTTTTTTAAAGACAACGCAGCACCATTCAAAATTCTTTTTCTGGCCGATCTCCATTACTCTCGTTTTGTTCCTTTAAGCCTGATTTCTGACGCGATTGCTCTTGGCATAGAACAAAAGCCCGATTTGATATTACTGGGCGGCGATTACGTATTATTTGATATGTCGCTGAATTTTTCGGCGTTTAGTGACGTACTCTCCCCCCTTGCCGAATGTGCGCCGACGTTTGCCTGCTTCGGCAACCACGATCGCCCTGTTGGTACAGAAAAAAATCACTTAATTGGCGAGACGTTGAAATCAGCGGGCATCACGGTGTTGTTTAACCAGGCTACGGTGATCGCCACGCCGAACAGGCAATTCGAACTGGTAGGCACTGGTGACTTATGGGCCGGACAATGCAAACCGCCTCCCGCCAGCGAAGCCAATCTGCCAAGACTGGTGCTGGCGCATAATCCCGACAGCAAAGAAGTCATGCGTGATGAACCCTGGGATCTGATGCTGTGCGGCCATACTCACGGCGGGCAACTGCGCGTACCGTTGGTTGGTGAACCTTTTGCCCCTGTCGAAGATAAACGTTACGTCGCCGGATTAAATGCCTTTGGCGAAAGACACATCTACACAACCCGTGGCGTGGGCAGTTTGTATGGTTTGCGTCTGAACTGCCGCCCGGAAGTAACGATGCTGGAACTGGTGTAG", - "dna_sequence_length": 813, - "functions": [ - "phosphodiesterase with model substrate bis-pNPP" - ], - "id": "CDS_160", - "location": [ - [ - "NC_000913", - 185069, - "-", - 813 - ] - ], - "md5": "70867f2a7a0d5da3cf5403789de56d3d", - "parent_gene": "", - "protein_md5": "26945a7f97dfc64de2925cea9fd84b75", - "protein_translation": "MISRRRFLQATAATIATSSGFGYMHYCEPGWFELIRHRLAFFKDNAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMSLNFSAFSDVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGITVLFNQATVIATPNRQFELVGTGDLWAGQCKPPPASEANLPRLVLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGERHIYTTRGVGSLYGLRLNCRPEVTMLELV", - "protein_translation_length": 270, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9D8" - ], - [ - "gene_synonym", - "GI:16128159" - ], - [ - "gene_synonym", - "NP_414708.1" - ], - [ - "gene_synonym", - "JW0161" - ], - [ - "gene_synonym", - "EcoGene:EG10207" - ], - [ - "gene_synonym", - "GeneID:944862" - ], - [ - "gene_synonym", - "ASAP:ABE-0000565" - ], - [ - "gene_synonym", - "ECK0164" - ], - [ - "gene_synonym", - "ssa" - ], - [ - "gene_synonym", - "b0166" - ], - [ - "gene_synonym", - "dapD" - ] - ], - "dna_sequence": "ATGCAGCAGTTACAGAACATTATTGAAACCGCTTTTGAACGCCGTGCCGAGATCACGCCAGCCAATGCAGACACCGTTACCCGCGAAGCGGTAAATCAGGTGATCGCCCTGCTGGATTCCGGCGCACTGCGTGTAGCGGAAAAAATTGACGGTCAGTGGGTGACGCATCAGTGGTTGAAAAAAGCGGTGCTGCTCTCTTTCCGTATTAATGATAATCAGGTGATCGAAGGGGCAGAAAGCCGCTACTTCGACAAAGTGCCGATGAAATTCGCCGACTACGACGAAGCACGTTTCCAGAAAGAAGGCTTCCGCGTTGTGCCACCAGCGGCGGTACGTCAGGGTGCGTTTATTGCCCGTAACACCGTGCTGATGCCGTCTTACGTCAACATCGGCGCATATGTTGATGAAGGCACCATGGTTGATACCTGGGCGACCGTCGGTTCTTGTGCGCAGATTGGTAAAAACGTCCACCTTTCCGGTGGCGTGGGCATCGGCGGCGTGCTGGAACCGCTGCAGGCTAACCCAACCATCATTGAAGATAATTGCTTCATCGGCGCGCGCTCTGAAGTGGTTGAAGGGGTGATTGTCGAAGAAGGTTCCGTCATTTCCATGGGCGTATACATTGGTCAGAGCACCCGTATTTACGACCGTGAAACCGGCGAAATCCACTACGGTCGCGTTCCGGCGGGGTCTGTGGTTGTTTCAGGTAATCTGCCGTCAAAAGATGGCAAATACAGCCTCTACTGTGCGGTTATCGTTAAGAAAGTTGACGCGAAAACTCGCGGCAAAGTCGGCATTAACGAACTGCTGCGTACCATCGACTAA", - "dna_sequence_length": 825, - "functions": [ - "2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase" - ], - "id": "CDS_161", - "location": [ - [ - "NC_000913", - 185947, - "-", - 825 - ] - ], - "md5": "c187c16d2b99b45ee6200a83498e84d8", - "parent_gene": "", - "protein_md5": "456634840ecc8c243e1ffa2773ca7012", - "protein_translation": "MQQLQNIIETAFERRAEITPANADTVTREAVNQVIALLDSGALRVAEKIDGQWVTHQWLKKAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEGFRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRETGEIHYGRVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID", - "protein_translation_length": 274, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128160" - ], - [ - "gene_synonym", - "JW0162" - ], - [ - "gene_synonym", - "NP_414709.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27249" - ], - [ - "gene_synonym", - "glnD" - ], - [ - "gene_synonym", - "EcoGene:EG11411" - ], - [ - "gene_synonym", - "GeneID:944863" - ], - [ - "gene_synonym", - "ASAP:ABE-0000568" - ], - [ - "gene_synonym", - "ECK0165" - ], - [ - "gene_synonym", - "b0167" - ] - ], - "dna_sequence": "ATGAATACCCTTCCAGAACAGTACGCAAACACCGCTCTCCCCACCCTGCCCGGTCAACCGCAAAATCCATGCGTCTGGCCCCGTGATGAATTAACCGTCGGTGGGATAAAAGCCCATATCGATACTTTCCAGCGTTGGCTGGGTGATGCCTTTGACAATGGGATCTCTGCAGAACAGTTGATTGAGGCGCGCACCGAGTTTATCGACCAGCTCCTGCAACGATTATGGATTGAAGCGGGATTCAGCCAGATTGCCGACCTGGCATTGGTCGCCGTCGGTGGCTACGGTCGTGGCGAGCTGCATCCACTTTCAGACGTCGATTTACTGATTTTAAGCCGTAAAAAGCTCCCGGACGATCAGGCGCAAAAAGTGGGCGAGCTGTTAACGCTGCTCTGGGATGTAAAGCTGGAAGTCGGTCATAGCGTGCGCACGCTTGAAGAGTGCATGCTGGAAGGGTTATCGGATTTAACCGTCGCCACCAATTTAATCGAATCCCGCTTATTAATTGGCGATGTTGCGCTGTTCCTCGAACTGCAAAAACATATTTTCAGCGAAGGATTCTGGCCTTCCGACAAGTTCTACGCGGCGAAAGTTGAAGAACAGAACCAGCGCCATCAGCGTTACCATGGCACCAGCTACAACCTTGAACCAGACATCAAAAGCAGCCCTGGCGGCTTGCGCGATATCCACACTCTGCAATGGGTGGCCCGCCGTCATTTTGGCGCAACATCGCTGGATGAAATGGTCGGGTTTGGCTTCTTAACCTCAGCGGAGCGGGCGGAATTAAACGAATGTCTGCATATATTGTGGCGTATTCGCTTTGCCCTGCATCTGGTCGTCAGCCGTTACGATAATCGCCTGTTATTCGATCGCCAGCTTAGCGTCGCCCAGCGTCTGAATTACAGTGGTGAAGGTAACGAACCGGTCGAGCGGATGATGAAGGATTACTTCCGCGTTACACGCCGCGTCAGTGAACTCAACCAGATGCTGCTGCAACTGTTCGATGAAGCCATCCTCGCCCTTCCCGCCGACGAAAAACCACGTCCAATCGACGATGAGTTTCAGCTACGCGGTACGCTAATCGACCTGCGTGATGAAACACTATTTATGCGCCAGCCGGAAGCCATCTTGCGTATGTTCTACACCATGGTGCACAACAGTGCGATCACCGGCATTTACTCCACCACGCTGCGCCAGTTACGCCATGCCCGTCGCCATCTGCAACAACCGCTGTGTAATATTCCGGAAGCACGAAAACTGTTTTTGAGCATTCTGCGTCACCCCGGAGCGGTGCGGCGCGGGCTATTGCCAATGCATCGCCATAGCGTGCTCGGCGCGTATATGCCGCAATGGTCGCATATCGTCGGGCAGATGCAGTTTGATCTGTTCCACGCCTACACGGTGGATGAACATACTATCCGCGTGATGCTGAAACTGGAGAGTTTTGCCAGTGAAGAAACGCGCCAGCGCCATCCGTTGTGTGTGGACGTCTGGCCGCGCCTGCCGTCAACTGAGCTGATTTTCATCGCCGCGCTGTTTCACGATATCGCCAAAGGACGCGGCGGCGACCACTCCATTCTCGGTGCTCAGGATGTAGTGCATTTTGCCGAACTCCACGGGCTGAACTCACGCGAAACACAGCTGGTCGCCTGGCTGGTTCGCCAGCACCTGTTGATGTCGGTGACCGCCCAACGCCGCGATATTCAGGACCCGGAAGTCATCAAGCAGTTTGCCGAAGAAGTGCAAACGGAAAATCGTCTGCGCTATCTGGTATGCCTGACTGTGGCTGACATTTGCGCCACCAACGAAACGCTGTGGAATAGCTGGAAGCAAAGTCTGTTGCGTGAGCTCTACTTTGCCACCGAAAAGCAGCTACGACGCGGAATGCAAAACACGCCGGATATGCGCGAACGGGTTCGCCATCACCAACTCCAGGCACTGGCACTACTGCGCATGGATAACATCGACGAAGAGGCGCTGCACCAAATTTGGTCACGCTGTCGTGCTAACTATTTTGTCCGCCATAGCCCAAATCAACTGGCCTGGCATGCCCGCCATTTATTACAGCATGATTTAAGCAAACCGCTGGTATTGCTTAGCCCGCAGGCTACGCGTGGAGGCACCGAGATTTTTATCTGGAGCCCGGACCGCCCTTATCTGTTTGCCGCCGTCTGTGCCGAATTAGACCGCCGCAATTTAAGTGTTCACGACGCACAAATTTTCACCACTCGCGACGGTATGGCGATGGATACCTTTATCGTGCTGGAACCCGATGGCAACCCGCTGTCCGCAGATCGTCATGAGGTTATTCGGTTTGGTCTGGAGCAAGTACTGACGCAAAGTAGCTGGCAGCCACCGCAGCCCCGTCGCCAACCCGCCAAATTACGCCATTTTACTGTTGAAACCGAAGTAACGTTTTTGCCGACCCATACCGACCGCAAATCGTTCCTCGAACTGATCGCCCTCGACCAACCTGGACTGCTGGCGCGAGTCGGGAAAATTTTTGCCGATCTGGGAATTTCGCTTCATGGTGCCCGAATTACAACCATTGGCGAGCGAGTAGAAGATTTATTCATAATTGCCACCGCTGACCGGCGTGCGCTTAATAACGAGTTGCAGCAGGAAGTGCATCAGCGGTTGACAGAGGCCCTCAATCCAAACGATAAAGGGTGA", 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"MNTLPEQYANTALPTLPGQPQNPCVWPRDELTVGGIKAHIDTFQRWLGDAFDNGISAEQLIEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHPLSDVDLLILSRKKLPDDQAQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVATNLIESRLLIGDVALFLELQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPDIKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTSAERAELNECLHILWRIRFALHLVVSRYDNRLLFDRQLSVAQRLNYSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLFDEAILALPADEKPRPIDDEFQLRGTLIDLRDETLFMRQPEAILRMFYTMVHNSAITGIYSTTLRQLRHARRHLQQPLCNIPEARKLFLSILRHPGAVRRGLLPMHRHSVLGAYMPQWSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFASEETRQRHPLCVDVWPRLPSTELIFIAALFHDIAKGRGGDHSILGAQDVVHFAELHGLNSRETQLVAWLVRQHLLMSVTAQRRDIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQLRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEALHQIWSRCRANYFVRHSPNQLAWHARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGNPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALNNELQQEVHQRLTEALNPNDKG", - "protein_translation_length": 890, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "map" - ], - [ - "gene_synonym", - "GI:16128161" - ], - [ - "gene_synonym", - "pepM" - ], - [ - "gene_synonym", - "JW0163" - ], - [ - "gene_synonym", - "GeneID:947882" - ], - [ - "gene_synonym", - "NP_414710.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000571" - ], - [ - "gene_synonym", - "b0168" - ], - [ - "gene_synonym", - "EcoGene:EG10570" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE18" - ], - [ - "gene_synonym", - "ECK0166" - ] - ], - "dna_sequence": "ATGGCTATCTCAATCAAGACCCCAGAAGATATCGAAAAAATGCGCGTCGCTGGCCGACTGGCTGCCGAAGTGCTGGAGATGATCGAACCGTATGTTAAACCGGGCGTCAGCACCGGCGAGCTGGATCGCATCTGTAATGATTACATTGTTAATGAACAACACGCGGTTTCTGCCTGCCTCGGCTATCACGGCTATCCGAAATCCGTTTGCATCTCTATTAATGAAGTGGTGTGCCACGGTATCCCGGACGATGCTAAGCTGCTGAAAGATGGCGATATCGTTAACATTGATGTCACCGTAATCAAAGATGGTTTCCACGGCGATACCTCGAAAATGTTTATCGTCGGTAAGCCGACCATCATGGGCGAACGTCTGTGCCGCATCACGCAAGAAAGCCTGTACCTGGCGCTACGCATGGTAAAACCAGGCATTAATCTGCGCGAAATCGGTGCGGCGATTCAGAAATTTGTCGAAGCAGAAGGCTTCTCCGTCGTTCGTGAATATTGCGGACACGGTATTGGTCGCGGCTTCCATGAAGAACCGCAGGTGCTGCACTATGACTCCCGTGAAACCAACGTCGTACTGAAACCTGGGATGACGTTCACCATCGAGCCAATGGTCAACGCGGGTAAAAAAGAGATCCGCACCATGAAAGATGGCTGGACGGTAAAAACCAAAGATCGCAGCTTGTCTGCACAATATGAGCATACTATTGTGGTGACTGATAACGGCTGCGAAATTCTGACGCTACGCAAGGATGACACCATCCCGGCGATAATCTCGCACGACGAATAA", - "dna_sequence_length": 795, - "functions": [ - "methionine aminopeptidase" - ], - "id": "CDS_163", - "location": [ - [ - "NC_000913", - 189506, - "-", - 795 - ] - ], - "md5": "39a60be35c76ad3acc3e43c67a05f0cc", - "parent_gene": "", - "protein_md5": "c168653e3c8d2bb35f52032fea2ce506", - "protein_translation": "MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE", - "protein_translation_length": 264, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0164" - ], - [ - "gene_synonym", - "GI:16128162" - ], - [ - "gene_synonym", - "GeneID:947874" - ], - [ - "gene_synonym", - "rpsB" - ], - [ - "gene_synonym", - "EcoGene:EG10901" - ], - [ - "gene_synonym", - "NP_414711.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7V0" - ], - [ - "gene_synonym", - "b0169" - ], - [ - "gene_synonym", - "ECK0168" - ], - [ - "gene_synonym", - "ASAP:ABE-0000575" - ] - ], - "dna_sequence": "ATGGCAACTGTTTCCATGCGCGACATGCTCAAGGCTGGTGTTCACTTCGGTCACCAGACCCGTTACTGGAACCCGAAAATGAAGCCGTTCATCTTCGGTGCGCGTAACAAAGTTCACATCATCAACCTTGAGAAAACTGTACCGATGTTCAACGAAGCTCTGGCTGAACTGAACAAGATTGCTTCTCGCAAAGGTAAAATCCTTTTCGTTGGTACTAAACGCGCTGCAAGCGAAGCGGTGAAAGACGCTGCTCTGAGCTGCGACCAGTTCTTCGTGAACCATCGCTGGCTGGGCGGTATGCTGACTAACTGGAAAACCGTTCGTCAGTCCATCAAACGTCTGAAAGACCTGGAAACTCAGTCTCAGGACGGTACTTTCGACAAGCTGACCAAGAAAGAAGCGCTGATGCGCACTCGTGAGCTGGAGAAACTGGAAAACAGCCTGGGCGGTATCAAAGACATGGGCGGTCTGCCGGACGCTCTGTTTGTAATCGATGCTGACCACGAACACATTGCTATCAAAGAAGCAAACAACCTGGGTATTCCGGTATTTGCTATCGTTGATACCAACTCTGATCCGGACGGTGTTGACTTCGTTATCCCGGGTAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCAGGATCTGGCTTCCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAA", - "dna_sequence_length": 726, - "functions": [ - "30S ribosomal subunit protein S2" - ], - "id": "CDS_164", - "location": [ - [ - "NC_000913", - 189874, - "+", - 726 - ] - ], - "md5": "045a6d2aec21ab8ef4164c70b7ad9985", - "parent_gene": "", - "protein_md5": "f0974d30d7835f4b52b27c2f40e89ca4", - "protein_translation": "MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE", - "protein_translation_length": 241, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0165" - ], - [ - "gene_synonym", - "GI:16128163" - ], - [ - "gene_synonym", - "tsf" - ], - [ - "gene_synonym", - "EcoGene:EG11033" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6P1" - ], - [ - "gene_synonym", - "GeneID:944866" - ], - [ - "gene_synonym", - "ECK0169" - ], - [ - "gene_synonym", - "ASAP:ABE-0000579" - ], - [ - "gene_synonym", - "NP_414712.1" - ], - [ - "gene_synonym", - "b0170" - ] - ], - "dna_sequence": "ATGGCTGAAATTACCGCATCCCTGGTAAAAGAGCTGCGTGAGCGTACTGGCGCAGGCATGATGGATTGCAAAAAAGCACTGACTGAAGCTAACGGCGACATCGAGCTGGCAATCGAAAACATGCGTAAGTCCGGTGCTATTAAAGCAGCGAAAAAAGCAGGCAACGTTGCTGCTGACGGCGTGATCAAAACCAAAATCGACGGCAACTACGGCATCATTCTGGAAGTTAACTGCCAGACTGACTTCGTTGCAAAAGACGCTGGTTTCCAGGCGTTCGCAGACAAAGTTCTGGACGCAGCTGTTGCTGGCAAAATCACTGACGTTGAAGTTCTGAAAGCACAGTTCGAAGAAGAACGTGTTGCGCTGGTAGCGAAAATTGGTGAAAACATCAACATTCGCCGCGTTGCTGCGCTGGAAGGCGACGTTCTGGGTTCTTATCAGCACGGTGCGCGTATCGGCGTTCTGGTTGCTGCTAAAGGCGCTGACGAAGAGCTGGTTAAACACATCGCTATGCACGTTGCTGCAAGCAAGCCAGAATTCATCAAACCGGAAGACGTATCCGCTGAAGTGGTAGAAAAAGAATACCAGGTACAGCTGGATATCGCGATGCAGTCTGGTAAGCCGAAAGAAATCGCAGAGAAAATGGTTGAAGGCCGCATGAAGAAATTCACCGGCGAAGTTTCTCTGACCGGTCAGCCGTTCGTTATGGAACCAAGCAAAACTGTTGGTCAGCTGCTGAAAGAGCATAACGCTGAAGTGACTGGCTTCATCCGCTTCGAAGTGGGTGAAGGCATCGAGAAAGTTGAGACTGACTTTGCAGCAGAAGTTGCTGCGATGTCCAAGCAGTCTTAA", - "dna_sequence_length": 852, - "functions": [ - "translation elongation factor EF-Ts" - ], - "id": "CDS_165", - "location": [ - [ - "NC_000913", - 190857, - "+", - 852 - ] - ], - "md5": "620e05082af5bfbd34f0075e869a50b3", - "parent_gene": "", - "protein_md5": "5c95adf3bad4ca4fb76bb94204974137", - "protein_translation": "MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKITDVEVLKAQFEEERVALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKGADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEGRMKKFTGEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEVAAMSKQS", - "protein_translation_length": 283, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11539" - ], - [ - "gene_synonym", - "JW0166" - ], - [ - "gene_synonym", - "GI:16128164" - ], - [ - "gene_synonym", - "GeneID:944989" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7E9" - ], - [ - "gene_synonym", - "ASAP:ABE-0000582" - ], - [ - "gene_synonym", - "b0171" - ], - [ - "gene_synonym", - "pyrH" - ], - [ - "gene_synonym", - "ECK0170" - ], - [ - "gene_synonym", - "NP_414713.1" - ], - [ - "gene_synonym", - "umk" - ], - [ - "gene_synonym", - "smbA" - ] - ], - "dna_sequence": "ATGGCTACCAATGCAAAACCCGTCTATAAACGCATTCTGCTTAAGTTGAGTGGCGAAGCTCTGCAGGGCACTGAAGGCTTCGGTATTGATGCAAGCATACTGGATCGTATGGCTCAGGAAATCAAAGAACTGGTTGAACTGGGTATTCAGGTTGGTGTGGTGATTGGTGGGGGTAACCTGTTCCGTGGCGCTGGTCTGGCGAAAGCGGGTATGAACCGCGTTGTGGGCGACCACATGGGGATGCTGGCGACCGTAATGAACGGCCTGGCAATGCGTGATGCACTGCACCGCGCCTATGTGAACGCTCGTCTGATGTCCGCTATTCCATTGAATGGCGTGTGCGACAGCTACAGCTGGGCAGAAGCTATCAGCCTGTTGCGCAACAACCGTGTGGTGATCCTCTCCGCCGGTACAGGTAACCCGTTCTTTACCACCGACTCAGCAGCTTGCCTGCGTGGTATCGAAATTGAAGCCGATGTGGTGCTGAAAGCAACCAAAGTTGACGGCGTGTTTACCGCTGATCCGGCGAAAGATCCAACCGCAACCATGTACGAGCAACTGACTTACAGCGAAGTGCTGGAAAAAGAGCTGAAAGTCATGGACCTGGCGGCCTTCACGCTGGCTCGTGACCATAAATTACCGATTCGTGTTTTCAATATGAACAAACCGGGTGCGCTGCGCCGTGTGGTAATGGGTGAAAAAGAAGGGACTTTAATCACGGAATAA", - "dna_sequence_length": 726, - "functions": [ - "uridylate kinase" - ], - "id": "CDS_166", - "location": [ - [ - "NC_000913", - 191855, - "+", - 726 - ] - ], - "md5": "75ed90a29ccaf4c565338dd4671a8195", - "parent_gene": "", - "protein_md5": "2a381e1e09c703d61823ce7f7d5643e3", - "protein_translation": "MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKELVELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVFNMNKPGALRRVVMGEKEGTLITE", - "protein_translation_length": 241, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414714.1" - ], - [ - "gene_synonym", - "JW0167" - ], - [ - "gene_synonym", - "GI:16128165" - ], - [ - "gene_synonym", - "rrf" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A805" - ], - [ - "gene_synonym", - "EcoGene:EG10335" - ], - [ - "gene_synonym", - "frr" - ], - [ - "gene_synonym", - "ASAP:ABE-0000588" - ], - [ - "gene_synonym", - "ECK0171" - ], - [ - "gene_synonym", - "b0172" - ], - [ - "gene_synonym", - "GeneID:946122" - ] - ], - "dna_sequence": "GTGATTAGCGATATCAGAAAAGATGCTGAAGTACGCATGGACAAATGCGTAGAAGCGTTCAAAACCCAAATCAGCAAAATACGCACGGGTCGTGCTTCTCCCAGCCTGCTGGATGGCATTGTCGTGGAATATTACGGCACGCCGACGCCGCTGCGTCAGCTGGCAAGCGTAACGGTAGAAGATTCCCGTACACTGAAAATCAACGTGTTTGATCGTTCAATGTCTCCGGCCGTTGAAAAAGCGATTATGGCGTCCGATCTTGGCCTGAACCCGAACTCTGCGGGTAGCGACATCCGTGTTCCGCTGCCGCCGCTGACGGAAGAACGTCGTAAAGATCTGACCAAAATCGTTCGTGGTGAAGCAGAACAAGCGCGTGTTGCAGTACGTAACGTGCGTCGTGACGCGAACGACAAAGTGAAAGCACTGTTGAAAGATAAAGAGATCAGCGAAGACGACGATCGCCGTTCTCAGGACGATGTACAGAAACTGACTGATGCTGCAATCAAGAAAATTGAAGCGGCGCTGGCAGACAAAGAAGCAGAACTGATGCAGTTCTGA", - "dna_sequence_length": 558, - "functions": [ - "ribosome recycling factor" - ], - "id": "CDS_167", - "location": [ - [ - "NC_000913", - 192872, - "+", - 558 - ] - ], - "md5": "cd394e4d7ee3a4e2f694d502d1ee3005", - "parent_gene": "", - "protein_md5": "0e5b9e7c05a91724267593844409d8e5", - "protein_translation": "MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELMQF", - "protein_translation_length": 185, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128166" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45568" - ], - [ - "gene_synonym", - "ASAP:ABE-0000592" - ], - [ - "gene_synonym", - "JW0168" - ], - [ - "gene_synonym", - "dxr" - ], - [ - "gene_synonym", - "NP_414715.1" - ], - [ - "gene_synonym", - "yaeM" - ], - [ - "gene_synonym", - "GeneID:945019" - ], - [ - "gene_synonym", - "ECK0172" - ], - [ - "gene_synonym", - "EcoGene:EG12715" - ], - [ - "gene_synonym", - "b0173" - ], - [ - "gene_synonym", - "ispC" - ] - ], - "dna_sequence": "ATGAAGCAACTCACCATTCTGGGCTCGACCGGCTCGATTGGTTGCAGCACGCTGGACGTGGTGCGCCATAATCCCGAACACTTCCGCGTAGTTGCGCTGGTGGCAGGCAAAAATGTCACTCGCATGGTAGAACAGTGCCTGGAATTCTCTCCCCGCTATGCCGTAATGGACGATGAAGCGAGTGCGAAACTTCTTAAAACGATGCTACAGCAACAGGGTAGCCGCACCGAAGTCTTAAGTGGGCAACAAGCCGCTTGCGATATGGCAGCGCTTGAGGATGTTGATCAGGTGATGGCAGCCATTGTTGGCGCTGCTGGGCTGTTACCTACGCTTGCTGCGATCCGCGCGGGTAAAACCATTTTGCTGGCCAATAAAGAATCACTGGTTACCTGCGGACGTCTGTTTATGGACGCCGTAAAGCAGAGCAAAGCGCAATTGTTACCGGTCGATAGCGAACATAACGCCATTTTTCAGAGTTTACCGCAACCTATCCAGCATAATCTGGGATACGCTGACCTTGAGCAAAATGGCGTGGTGTCCATTTTACTTACCGGGTCTGGTGGCCCTTTCCGTGAGACGCCATTGCGCGATTTGGCAACAATGACGCCGGATCAAGCCTGCCGTCATCCGAACTGGTCGATGGGGCGTAAAATTTCTGTCGATTCGGCTACCATGATGAACAAAGGTCTGGAATACATTGAAGCGCGTTGGCTGTTTAACGCCAGCGCCAGCCAGATGGAAGTGCTGATTCACCCGCAGTCAGTGATTCACTCAATGGTGCGCTATCAGGACGGCAGTGTTCTGGCGCAGCTGGGGGAACCGGATATGCGTACGCCAATTGCCCACACCATGGCATGGCCGAATCGCGTGAACTCTGGCGTGAAGCCGCTCGATTTTTGCAAACTAAGTGCGTTGACATTTGCCGCACCGGATTATGATCGTTATCCATGCCTGAAACTGGCGATGGAGGCGTTCGAACAAGGCCAGGCAGCGACGACAGCATTGAATGCCGCAAACGAAATCACCGTTGCTGCTTTTCTTGCGCAACAAATCCGCTTTACGGATATCGCTGCGTTGAATTTATCCGTACTGGAAAAAATGGATATGCGCGAACCACAATGTGTGGACGATGTGTTATCTGTTGATGCGAACGCGCGTGAAGTCGCCAGAAAAGAGGTGATGCGTCTCGCAAGCTGA", - "dna_sequence_length": 1197, - "functions": [ - "1-deoxy-D-xylulose 5-phosphate reductoisomerase" - ], - "id": "CDS_168", - "location": [ - [ - "NC_000913", - 193521, - "+", - 1197 - ] - ], - "md5": "f0e939c6c6d492fea23aeaa526f58f83", - "parent_gene": "", - "protein_md5": "e8cd2b09ad65623d0bbb2d02485e3fcb", - "protein_translation": "MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKEVMRLAS", - "protein_translation_length": 398, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "uppS" - ], - [ - "gene_synonym", - "ECK0173" - ], - [ - "gene_synonym", - "GI:16128167" - ], - [ - "gene_synonym", - "yaeS" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60472" - ], - [ - "gene_synonym", - "ispU" - ], - [ - "gene_synonym", - "ASAP:ABE-0000595" - ], - [ - "gene_synonym", - "JW0169" - ], - [ - "gene_synonym", - "rth" - ], - [ - "gene_synonym", - "GeneID:944874" - ], - [ - "gene_synonym", - "NP_414716.1" - ], - [ - "gene_synonym", - "b0174" - ], - [ - "gene_synonym", - "EcoGene:EG13329" - ] - ], - "dna_sequence": "GTGATGTTGTCTGCTACTCAACCACTTAGCGAAAAATTGCCAGCGCATGGCTGCCGTCATGTTGCGATCATTATGGACGGCAATGGCCGCTGGGCAAAAAAGCAAGGGAAGATTCGTGCCTTTGGGCATAAAGCCGGGGCAAAATCCGTCCGCCGGGCTGTCTCTTTTGCGGCCAACAACGGTATTGAGGCGTTAACGCTGTATGCCTTTAGTAGTGAAAACTGGAACCGACCAGCGCAGGAAGTCAGTGCGTTAATGGAACTGTTTGTGTGGGCGCTCGATAGCGAAGTAAAAAGTCTGCACCGACATAACGTGCGTCTGCGTATTATTGGCGATACCAGTCGCTTTAACTCGCGTTTGCAAGAACGTATTCGTAAATCTGAAGCGCTAACAGCCGGGAATACCGGTCTGACGCTGAATATTGCGGCGAACTACGGTGGACGTTGGGATATAGTCCAGGGAGTCAGGCAACTGGCTGAAAAGGTGCAGCAAGGAAACCTGCAACCAGATCAGATAGATGAAGAGATGCTAAACCAGCATGTCTGTATGCATGAACTGGCCCCTGTAGATTTAGTAATTAGGACTGGGGGGGAGCATCGCATTAGTAACTTTTTGCTTTGGCAAATTGCCTATGCCGAACTTTACTTTACAGATGTTCTCTGGCCCGATTTCGATGAACAAGACTTTGAAGGGGCGTTAAATGCCTTTGCTAATCGAGAGCGTCGTTTCGGCGGCACCGAGCCCGGTGATGAAACAGCCTGA", - "dna_sequence_length": 762, - "functions": [ - "undecaprenyl pyrophosphate synthase" - ], - "id": "CDS_169", - "location": [ - [ - "NC_000913", - 194903, - "+", - 762 - ] - ], - "md5": "fb743ab4720198c8f5952a04a2562727", - "parent_gene": "", - "protein_md5": "a95d322438644ad81c219c6322ffad06", - "protein_translation": "MMLSATQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTEPGDETA", - "protein_translation_length": 253, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111095" - ], - [ - "gene_synonym", - "ASAP:ABE-0000600" - ], - [ - "gene_synonym", - "JW5810" - ], - [ - "gene_synonym", - "ECK0174" - ], - [ - "gene_synonym", - "EcoGene:EG10139" - ], - [ - "gene_synonym", - "GeneID:944876" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABG1" - ], - [ - "gene_synonym", - "cdsA" - ], - [ - "gene_synonym", - "b0175" - ], - [ - "gene_synonym", - "NP_414717.2" - ] - ], - "dna_sequence": "TTGCTGAAGTATCGCCTGATATCTGCTTTTGTGTTAATACCCGTCGTCATCGCGGCGTTGTTTCTGTTGCCGCCGGTGGGGTTCGCCATTGTAACGCTGGTGGTCTGCATGCTGGCAGCGTGGGAATGGGGACAGCTTAGCGGTTTTACCACTCGTTCGCAGCGAGTATGGTTGGCGGTGTTATGCGGGTTATTGTTGGCGCTGATGCTTTTTCTGTTGCCGGAATATCACCGAAATATTCATCAACCGCTGGTTGAAATCTCACTTTGGGCTTCGCTGGGTTGGTGGATTGTCGCGCTATTGCTGGTGCTGTTTTACCCAGGTTCCGCAGCAATCTGGCGTAACTCTAAAACATTGCGCCTTATTTTTGGCGTGCTAACCATTGTTCCCTTCTTCTGGGGCATGCTGGCGTTACGGGCCTGGCACTATGACGAGAATCATTACAGTGGCGCAATATGGCTGCTCTATGTCATGATCCTGGTATGGGGCGCTGACTCCGGCGCATATATGTTTGGCAAATTGTTTGGTAAACATAAGCTGGCACCGAAGGTTTCTCCGGGTAAAACCTGGCAAGGCTTTATCGGTGGACTCGCTACTGCAGCGGTAATCTCATGGGGTTATGGCATGTGGGCGAATCTCGACGTCGCTCCCGTCACCTTACTCATTTGCTCTATTGTCGCAGCGTTAGCCTCAGTGCTCGGCGATCTGACCGAGAGTATGTTTAAGCGTGAAGCAGGAATTAAGGACAGCGGTCATTTAATTCCAGGACACGGTGGTATTTTAGATCGTATTGATAGCCTGACGGCTGCGGTACCGGTCTTTGCTTGCTTGTTGTTACTGGTATTCAGGACGCTTTAA", - "dna_sequence_length": 858, - "functions": [ - "CDP-diglyceride synthase" - ], - "id": "CDS_170", - "location": [ - [ - "NC_000913", - 195677, - "+", - 858 - ] - ], - "md5": "1b8e824aa6c359d6dd7d8277b7b5654c", - "parent_gene": "", - "protein_md5": "75f6a8137282a1b04f4365d3b7438f8b", - "protein_translation": "MLKYRLISAFVLIPVVIAALFLLPPVGFAIVTLVVCMLAAWEWGQLSGFTTRSQRVWLAVLCGLLLALMLFLLPEYHRNIHQPLVEISLWASLGWWIVALLLVLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLALRAWHYDENHYSGAIWLLYVMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGYGMWANLDVAPVTLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFACLLLLVFRTL", - "protein_translation_length": 285, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000603" - ], - [ - "gene_synonym", - "JW0171" - ], - [ - "gene_synonym", - "GeneID:944871" - ], - [ - "gene_synonym", - "ecfE" - ], - [ - "gene_synonym", - "EcoGene:EG12436" - ], - [ - "gene_synonym", - "rseP" - ], - [ - "gene_synonym", - "GI:16128169" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEH1" - ], - [ - "gene_synonym", - "NP_414718.1" - ], - [ - "gene_synonym", - "b0176" - ], - [ - "gene_synonym", - "yaeL" - ], - [ - "gene_synonym", - "ECK0175" - ] - ], - "dna_sequence": "ATGCTGAGTTTTCTCTGGGATTTGGCTTCGTTCATCGTTGCACTGGGTGTACTTATCACCGTGCATGAATTTGGTCATTTCTGGGTTGCCCGGCGTTGTGGTGTTCGCGTTGAGCGTTTCTCAATAGGGTTTGGTAAGGCGCTCTGGCGGCGAACTGATAAGCTCGGCACCGAATATGTTATCGCCCTGATCCCGTTGGGCGGTTATGTCAAAATGCTGGATGAGCGCGCAGAACCGGTCGTTCCGGAACTCCGCCACCATGCCTTCAATAATAAATCTGTCGGCCAACGAGCGGCGATTATTGCCGCAGGTCCGGTTGCAAACTTCATTTTTGCTATCTTTGCCTACTGGCTGGTTTTTATTATTGGTGTGCCTGGCGTACGTCCGGTGGTTGGCGAAATAGCAGCCAATTCGATAGCTGCGGAAGCACAAATTGCACCAGGTACGGAACTAAAAGCCGTAGATGGTATCGAAACGCCTGATTGGGATGCCGTGCGTTTGCAGTTGGTCGATAAAATTGGCGATGAAAGCACCACCATTACAGTAGCGCCATTTGGCAGCGACCAACGGCGGGATGTAAAGCTCGATTTACGTCACTGGGCGTTTGAGCCTGATAAAGAAGATCCGGTATCTTCGCTGGGGATTCGTCCTCGTGGGCCGCAAATTGAACCTGTACTGGAAAATGTGCAGCCAAACTCGGCGGCAAGCAAGGCAGGTTTGCAAGCAGGCGACAGGATCGTTAAAGTCGATGGTCAGCCCTTAACGCAGTGGGTGACCTTTGTGATGCTTGTCCGGGATAACCCGGGTAAATCCTTAGCGTTAGAAATCGAAAGGCAGGGGAGTCCCTTGTCTTTGACATTAATCCCGGAGAGTAAACCGGGTAATGGTAAAGCGATTGGTTTTGTCGGTATTGAGCCGAAAGTCATTCCTTTGCCAGATGAGTATAAAGTTGTACGCCAGTATGGGCCGTTCAACGCCATCGTCGAAGCCACGGACAAAACGTGGCAGCTGATGAAGCTGACGGTCAGTATGCTGGGAAAATTGATCACCGGTGATGTGAAACTGAACAACCTCAGTGGGCCGATCTCTATCGCCAAGGGGGCTGGGATGACAGCGGAACTCGGGGTTGTTTATTACCTGCCGTTTCTTGCGCTTATTAGCGTGAACTTAGGGATAATTAACCTGTTTCCGTTGCCCGTACTTGACGGGGGGCATCTGCTGTTCCTTGCGATCGAAAAGATCAAGGGCGGACCGGTATCCGAGCGGGTTCAAGACTTTTGTTATCGCATTGGCTCGATTCTGCTGGTGCTGTTAATGGGGCTTGCACTTTTCAATGATTTCTCTCGGTTATGA", - "dna_sequence_length": 1353, - "functions": [ - "inner membrane zinc RIP metalloprotease", - "RpoE activator, by degrading RseA", - "cleaved signal peptide endoprotease" - ], - "id": "CDS_171", - "location": [ - [ - "NC_000913", - 196546, - "+", - 1353 - ] - ], - "md5": "d1ad92468682ca56d72bd6cb128a2687", - "parent_gene": "", - "protein_md5": "d976d8d9918e87307e67da061135fb82", - "protein_translation": "MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGFGKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIAAGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPRGPQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEIERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKTWQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGIINLFPLPVLDGGHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL", - "protein_translation_length": 450, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0172" - ], - [ - "gene_synonym", - "EcoGene:EG12676" - ], - [ - "gene_synonym", - "yzzY" - ], - [ - "gene_synonym", - "yaeT" - ], - [ - "gene_synonym", - "omp85" - ], - [ - "gene_synonym", - "ecfK" - ], - [ - "gene_synonym", - "ASAP:ABE-0000605" - ], - [ - "gene_synonym", - "bamA" - ], - [ - "gene_synonym", - "GI:16128170" - ], - [ - "gene_synonym", - "yzzN" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A940" - ], - [ - "gene_synonym", - "GeneID:944870" - ], - [ - "gene_synonym", - "b0177" - ], - [ - "gene_synonym", - "ECK0176" - ], - [ - "gene_synonym", - "NP_414719.1" - ] - ], - "dna_sequence": "ATGGCGATGAAAAAGTTGCTCATAGCGTCGCTGCTGTTTAGCAGCGCCACCGTATACGGTGCTGAAGGGTTCGTAGTGAAAGATATTCATTTCGAAGGCCTTCAGCGTGTCGCCGTTGGTGCGGCCCTCCTCAGTATGCCGGTGCGCACAGGCGACACGGTTAATGATGAAGATATCAGTAATACCATTCGCGCTCTGTTTGCTACCGGCAACTTTGAGGATGTTCGCGTCCTTCGTGATGGTGATACCCTTCTGGTTCAGGTAAAAGAACGTCCGACCATTGCCAGCATTACTTTCTCCGGTAACAAATCGGTGAAAGATGACATGCTGAAGCAAAACCTCGAGGCTTCTGGTGTGCGTGTGGGCGAATCCCTCGATCGCACCACCATTGCCGATATCGAGAAAGGTCTGGAAGACTTCTACTACAGCGTCGGTAAATATAGCGCCAGCGTAAAAGCTGTCGTGACCCCGCTGCCGCGCAACCGTGTTGACCTAAAACTGGTGTTCCAGGAAGGTGTGTCAGCTGAAATCCAGCAAATTAACATTGTTGGTAACCATGCTTTCACCACCGACGAACTGATCTCTCATTTCCAACTGCGTGACGAAGTGCCGTGGTGGAACGTGGTAGGCGATCGTAAATACCAGAAACAGAAACTGGCGGGCGACCTTGAAACCCTGCGCAGCTACTATCTGGATCGCGGTTATGCCCGTTTCAACATCGACTCTACCCAGGTCAGTCTGACGCCAGATAAAAAAGGTATTTACGTCACGGTGAACATCACCGAAGGCGATCAGTACAAGCTTTCTGGCGTTGAAGTGAGCGGCAACCTTGCCGGGCACTCCGCTGAAATTGAGCAGCTGACTAAGATCGAGCCGGGTGAGCTGTATAACGGCACCAAAGTGACCAAGATGGAAGATGACATCAAAAAGCTTCTCGGTCGCTATGGTTATGCCTATCCGCGCGTACAGTCGATGCCCGAAATTAACGATGCCGACAAAACCGTTAAATTACGTGTGAACGTTGATGCGGGTAACCGTTTCTACGTGCGTAAGATCCGTTTTGAAGGTAACGATACCTCGAAAGATGCCGTCCTGCGTCGCGAAATGCGTCAGATGGAAGGTGCATGGCTGGGGAGCGATCTGGTCGATCAGGGTAAGGAGCGTCTGAATCGTCTGGGCTTCTTTGAAACTGTCGATACCGATACCCAACGTGTTCCGGGTAGCCCGGACCAGGTTGATGTCGTCTACAAGGTAAAAGAGCGCAACACCGGTAGCTTCAACTTTGGTATTGGTTACGGTACTGAAAGTGGCGTGAGCTTCCAGGCTGGTGTGCAGCAGGATAACTGGTTAGGTACAGGTTATGCTGTTGGTATCAACGGGACCAAAAACGATTACCAGACCTATGCTGAACTGTCGGTAACCAACCCGTACTTCACCGTAGATGGCGTAAGCCTCGGTGGTCGTCTCTTCTATAATGACTTCCAGGCAGATGACGCCGACCTGTCCGACTATACCAACAAGAGTTATGGTACAGACGTGACGTTGGGCTTCCCGATTAACGAATATAACTCGCTGCGTGCAGGTCTGGGTTATGTACATAACTCCCTGTCCAACATGCAGCCTCAGGTTGCGATGTGGCGTTATCTGTACTCTATGGGTGAACATCCGAGCACCTCTGATCAGGATAACAGCTTCAAAACGGACGACTTCACGTTCAACTATGGTTGGACCTATAACAAGCTTGACCGTGGTTACTTCCCGACAGATGGTTCACGTGTCAACCTGACCGGTAAAGTGACCATTCCTGGATCGGATAACGAATACTACAAAGTGACGTTAGACACGGCGACTTATGTGCCGATCGATGACGATCACAAATGGGTTGTTCTGGGGCGTACCCGCTGGGGTTATGGTGATGGTTTAGGCGGCAAAGAGATGCCGTTCTACGAGAACTTCTATGCCGGTGGTTCCAGCACCGTGCGTGGCTTCCAGTCCAATACCATTGGTCCGAAAGCAGTTTACTTCCCGCATCAGGCCAGTAATTATGATCCGGACTATGATTACGAATGTGCGACTCAGGACGGCGCGAAAGACCTGTGTAAATCGGATGATGCTGTAGGCGGTAACGCCATGGCGGTTGCCAGCCTCGAGTTCATCACCCCGACGCCGTTTATTAGCGATAAGTATGCTAACTCGGTTCGTACTTCCTTCTTCTGGGATATGGGTACCGTTTGGGATACAAACTGGGATTCCAGCCAATATTCTGGATATCCGGACTATAGTGATCCAAGCAATATCCGTATGTCTGCGGGTATCGCATTACAATGGATGTCCCCATTGGGGCCGTTGGTGTTCTCCTACGCCCAGCCGTTCAAAAAGTACGATGGAGACAAGGCAGAACAGTTCCAGTTTAACATCGGTAAAACCTGGTAA", 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"MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITPTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAEQFQFNIGKTW", - "protein_translation_length": 810, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0173" - ], - [ - "gene_synonym", - "hlpA" - ], - [ - "gene_synonym", - "skp" - ], - [ - "gene_synonym", - "ASAP:ABE-0000608" - ], - [ - "gene_synonym", - "GeneID:944861" - ], - [ - "gene_synonym", - "GI:16128171" - ], - [ - "gene_synonym", - "NP_414720.1" - ], - [ - "gene_synonym", - "EcoGene:EG10455" - ], - [ - "gene_synonym", - "b0178" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEU7" - ], - [ - "gene_synonym", - "ompH" - ], - [ - "gene_synonym", - "ECK0177" - ] - ], - "dna_sequence": "GTGAAAAAGTGGTTATTAGCTGCAGGTCTCGGTTTAGCACTGGCAACTTCTGCTCAGGCGGCTGACAAAATTGCAATCGTCAACATGGGCAGCCTGTTCCAGCAGGTAGCGCAGAAAACCGGTGTTTCTAACACGCTGGAAAATGAGTTCAAAGGCCGTGCCAGCGAACTGCAGCGTATGGAAACCGATCTGCAGGCTAAAATGAAAAAGCTGCAGTCCATGAAAGCGGGCAGCGATCGCACTAAGCTGGAAAAAGACGTGATGGCTCAGCGCCAGACTTTTGCTCAGAAAGCGCAGGCTTTTGAGCAGGATCGCGCACGTCGTTCCAACGAAGAACGCGGCAAACTGGTTACTCGTATCCAGACTGCTGTGAAATCCGTTGCCAACAGCCAGGATATCGATCTGGTTGTTGATGCAAACGCCGTTGCTTACAACAGCAGCGATGTAAAAGACATCACTGCCGACGTACTGAAACAGGTTAAATAA", - "dna_sequence_length": 486, - "functions": [ - "periplasmic chaperone" - ], - "id": "CDS_173", - "location": [ - [ - "NC_000913", - 200482, - "+", - 486 - ] - ], - "md5": "c49ca21f7ad66e22a4b3e0867717cffe", - "parent_gene": "", - "protein_md5": "bfaf87cb327c4863122f5b21037726d2", - "protein_translation": "MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSNTLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFEQDRARRSNEERGKLVTRIQTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQVK", - "protein_translation_length": 161, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000610" - ], - [ - "gene_synonym", - "JW0174" - ], - [ - "gene_synonym", - "lpxD" - ], - [ - "gene_synonym", - "firA" - ], - [ - "gene_synonym", - "GI:16128172" - ], - [ - "gene_synonym", - "ECK0178" - ], - [ - "gene_synonym", - "NP_414721.1" - ], - [ - "gene_synonym", - "b0179" - ], - [ - "gene_synonym", - "GeneID:944882" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21645" - ], - [ - "gene_synonym", - "omsA" - ], - [ - "gene_synonym", - "EcoGene:EG10316" - ], - [ - "gene_synonym", - "ssc" - ] - ], - "dna_sequence": "ATGCCTTCAATTCGACTGGCTGATTTAGCGCAGCAGTTGGATGCAGAACTACACGGTGATGGCGATATCGTCATCACCGGCGTTGCGTCCATGCAATCTGCACAAACAGGTCACATTACGTTCATGGTTAACCCAAAATACCGTGAGCATTTAGGCTTGTGCCAGGCGTCCGCGGTTGTCATGACCCAGGACGATCTTCCTTTCGCGAAAAGTGCCGCACTGGTAGTGAAGAATCCCTACCTGACTTACGCGCGCATGGCGCAAATTTTAGATACCACGCCGCAGCCCGCGCAGAACATTGCACCCAGTGCGGTGATCGACGCGACGGCGAAGCTGGGTAACAACGTATCGATTGGCGCTAACGCGGTGATTGAGTCCGGCGTTGAACTGGGCGATAACGTGATTATCGGTGCCGGTTGCTTCGTAGGTAAAAACAGCAAAATCGGTGCAGGTTCGCGTCTCTGGGCGAACGTAACCATTTACCATGAGATCCAGATCGGTCAGAATTGCCTGATCCAGTCCGGAACAGTGGTAGGCGCAGACGGCTTTGGTTATGCCAACGATCGTGGTAACTGGGTGAAGATCCCACAGATTGGTCGCGTAATTATTGGCGATCGCGTGGAGATCGGTGCCTGCACAACCATCGATCGCGGCGCGCTGGATGACACTATTATTGGCAATGGCGTGATCATTGATAACCAGTGCCAGATTGCACATAACGTCGTGATTGGCGACAATACGGCGGTTGCCGGTGGCGTCATTATGGCGGGCAGCCTGAAAATTGGTCGTTACTGCATGATCGGCGGAGCCAGCGTAATCAACGGGCATATGGAAATATGCGACAAAGTGACGGTTACGGGCATGGGTATGGTGATGCGTCCCATCACTGAACCAGGCGTCTATTCCTCAGGCATTCCGCTGCAACCCAACAAAGTCTGGCGCAAAACCGCTGCACTGGTGATGAACATTGATGACATGAGCAAGCGTCTGAAATCGCTTGAGCGCAAGGTTAATCAACAAGACTAA", 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- [ - "gene_synonym", - "fabZ" - ], - [ - "gene_synonym", - "GeneID:944888" - ], - [ - "gene_synonym", - "ECK0179" - ], - [ - "gene_synonym", - "sefA" - ], - [ - "gene_synonym", - "yaeA" - ], - [ - "gene_synonym", - "b0180" - ], - [ - "gene_synonym", - "sfhC" - ], - [ - "gene_synonym", - "sabA" - ], - [ - "gene_synonym", - "EcoGene:EG11284" - ] - ], - "dna_sequence": "TTGACTACTAACACTCATACTCTGCAGATTGAAGAGATTTTAGAACTTCTGCCGCACCGTTTCCCGTTCTTACTGGTGGATCGCGTGCTGGATTTTGAAGAAGGTCGTTTTCTGCGCGCAGTAAAAAATGTCTCTGTCAATGAGCCATTCTTCCAGGGCCATTTCCCTGGAAAACCGATTTTCCCGGGTGTGCTGATTCTGGAAGCAATGGCACAGGCAACAGGTATTCTGGCGTTTAAAAGCGTAGGAAAACTGGAACCGGGTGAGCTGTACTACTTCGCTGGTATTGACGAAGCGCGCTTCAAGCGCCCGGTCGTGCCTGGCGATCAAATGATCATGGAAGTCACTTTCGAAAAAACGCGCCGCGGCCTGACCCGTTTTAAAGGGGTTGCTCTGGTCGATGGTAAAGTAGTTTGCGAAGCAACGATGATGTGTGCTCGTAGCCGGGAGGCCTGA", - "dna_sequence_length": 456, - "functions": [ - "(3R)-hydroxymyristol acyl carrier protein dehydratase" - ], - "id": "CDS_175", - "location": [ - [ - "NC_000913", - 202101, - "+", - 456 - ] - ], - "md5": "3e944e6749f12eecdee93beebd5d2843", - "parent_gene": "", - "protein_md5": "39c986b5fa4f42d99ad008fbdd2694fb", - "protein_translation": "MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNVSVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA", - "protein_translation_length": 151, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0176" - ], - [ - "gene_synonym", - "NP_414723.1" - ], - [ - "gene_synonym", - "lpxA" - ], - [ - "gene_synonym", - "b0181" - ], - [ - "gene_synonym", - "ASAP:ABE-0000618" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A722" - ], - [ - "gene_synonym", - "EcoGene:EG10545" - ], - [ - "gene_synonym", - "ECK0180" - ], - [ - "gene_synonym", - "GI:16128174" - ], - [ - "gene_synonym", - "GeneID:944849" - ] - ], - "dna_sequence": "GTGATTGATAAATCCGCCTTTGTGCATCCAACCGCCATTGTGGAAGAGGGCGCGTCAATTGGCGCGAACGCACACATTGGTCCTTTTTGTATCGTTGGACCCCATGTCGAAATTGGTGAGGGTACCGTACTGAAATCTCACGTTGTCGTGAATGGTCATACTAAAATTGGCCGCGATAATGAGATTTATCAGTTCGCCTCCATCGGCGAAGTTAACCAGGATCTGAAATATGCTGGCGAACCGACCCGTGTGGAAATCGGCGATCGTAACCGCATTCGCGAAAGCGTCACCATTCATCGTGGCACAGTCCAGGGCGGTGGATTGACGAAGGTGGGCAGCGACAACTTACTGATGATCAACGCGCACATTGCGCACGATTGTACGGTAGGTAACCGCTGTATTCTCGCCAACAACGCAACGCTGGCGGGTCACGTATCGGTTGACGACTTCGCGATCATCGGCGGCATGACCGCAGTCCATCAGTTCTGCATCATTGGTGCGCACGTGATGGTTGGCGGCTGCTCCGGTGTGGCGCAGGACGTCCCTCCTTATGTCATTGCGCAGGGTAACCACGCAACGCCGTTCGGTGTCAATATCGAAGGGCTGAAGCGCCGCGGATTCAGCCGTGAGGCGATTACCGCTATCCGCAATGCGTATAAGCTGATTTATCGTAGCGGTAAAACGCTCGATGAAGTGAAACCGGAAATTGCTGAACTGGCGGAAACATATCCGGAAGTGAAAGCCTTTACCGATTTCTTTGCACGCTCAACGCGCGGTCTGATTCGTTAA", - "dna_sequence_length": 789, - "functions": [ - "UDP-N-acetylglucosamine acetyltransferase" - ], - "id": "CDS_176", - "location": [ - [ - "NC_000913", - 202560, - "+", - 789 - ] - ], - "md5": "1397f3023ed6a892ed85169d29c18896", - "parent_gene": "", - "protein_md5": "67d5473b2d87839eceb38dacbf198014", - "protein_translation": "MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNAYKLIYRSGKTLDEVKPEIAELAETYPEVKAFTDFFARSTRGLIR", - "protein_translation_length": 262, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944838" - ], - [ - "gene_synonym", - "JW0177" - ], - [ - "gene_synonym", - "ECK0181" - ], - [ - "gene_synonym", - "lpxB" - ], - [ - "gene_synonym", - "GI:16128175" - ], - [ - "gene_synonym", - "b0182" - ], - [ - "gene_synonym", - "NP_414724.1" - ], - [ - "gene_synonym", - "EcoGene:EG10546" - ], - [ - "gene_synonym", - "pgsB" - ], - [ - "gene_synonym", - "ASAP:ABE-0000620" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10441" - ] - ], - "dna_sequence": 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"gene_synonym", - "GeneID:944852" - ], - [ - "gene_synonym", - "b0183" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10442" - ], - [ - "gene_synonym", - "GI:16128176" - ], - [ - "gene_synonym", - "ASAP:ABE-0000622" - ] - ], - "dna_sequence": "ATGATCGAATTTGTTTATCCGCACACGCAGCTGGTTGCGGGTGTGGATGAAGTCGGACGCGGGCCGTTAGTTGGCGCGGTCGTCACCGCTGCGGTGATCCTTGACCCGGCGCGCCCGATTGCCGGGCTGAATGATTCCAAAAAGCTGAGCGAAAAACGCCGTCTGGCGCTCTATGAAGAGATCAAAGAGAAAGCGTTGAGCTGGAGTCTGGGCCGCGCGGAACCCCACGAAATCGACGAGCTGAACATTCTTCATGCGACCATGCTGGCGATGCAGCGTGCCGTCGCTGGGCTGCATATTGCGCCGGAATATGTGTTGATTGATGGTAACCGCTGCCCGAAATTACCGATGCCTGCGATGGCTGTGGTGAAAGGCGATAGCCGCGTACCGGAAATCAGTGCCGCGTCTATCCTGGCGAAAGTGACGCGTGACGCCGAAATGGCGGCGCTGGATATTGTTTTCCCGCAATATGGTTTTGCCCAACACAAAGGGTACCCAACCGCTTTTCATCTGGAAAAACTGGCTGAACACGGCGCGACCGAACACCATCGGCGCAGCTTTGGGCCTGTCAAACGCGCACTGGGACTTGCGTCCTGA", - "dna_sequence_length": 597, - "functions": [ - "ribonuclease HII, degrades RNA of DNA-RNA hybrids" - ], - "id": "CDS_178", - "location": [ - [ - "NC_000913", - 204493, - "+", - 597 - ] - ], - "md5": "a4a68e390e6c684477e52b635554c133", - "parent_gene": "", - "protein_md5": "d7a3a5e13c1c51387522d19a7825cf8f", - "protein_translation": "MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLNDSKKLSEKRRLALYEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAPEYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFAQHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGLAS", - "protein_translation_length": 198, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414726.1" - ], - [ - "gene_synonym", - "GI:16128177" - ], - [ - "gene_synonym", - "ECK0183" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10443" - ], - [ - "gene_synonym", - "GeneID:944877" - ], - [ - "gene_synonym", - "b0184" - ], - [ - "gene_synonym", - "polC" - ], - [ - "gene_synonym", - "sdgC" - ], - [ - "gene_synonym", - "ASAP:ABE-0000624" - ], - [ - "gene_synonym", - "dnaE" - ], - [ - "gene_synonym", - "EcoGene:EG10238" - ], - [ - "gene_synonym", - "JW0179" - ] - ], - "dna_sequence": "ATGTCTGAACCACGTTTCGTACACCTGCGGGTGCACAGCGACTACTCGATGATCGATGGCCTGGCCAAAACCGCACCGTTGGTAAAAAAGGCGGCGGCGTTGGGTATGCCAGCACTGGCGATCACCGATTTCACCAACCTTTGTGGTCTGGTGAAGTTCTACGGAGCGGGACATGGCGCAGGGATTAAGCCTATCGTCGGGGCAGATTTTAACGTCCAGTGCGACCTGCTGGGTGATGAGTTAACCCACCTGACGGTACTGGCGGCGAACAATACCGGCTATCAGAATCTGACGTTGCTGATCTCAAAAGCGTATCAGCGCGGGTACGGTGCCGCCGGGCCGATCATCGATCGCGACTGGCTTATCGAATTAAACGAAGGGTTGATCCTTCTTTCCGGCGGACGCATGGGCGACGTCGGACGCAGTCTTTTGCGTGGTAACAGCGCGCTGGTAGATGAGTGTGTCGCGTTTTATGAAGAACACTTCCCGGATCGCTATTTTCTCGAGCTGATCCGCACCGGCAGGCCGGATGAAGAAAGCTATCTGCACGCGGCGGTGGAACTGGCGGAAGCGCGCGGTTTGCCCGTCGTGGCGACCAACGACGTGCGCTTTATCGACAGCAGCGACTTTGACGCACACGAAATCCGCGTCGCGATCCACGACGGCTTTACCCTCGACGATCCTAAACGCCCGCGTAACTATTCGCCGCAGCAATATATGCGTAGCGAAGAGGAGATGTGTGAGCTGTTTGCCGACATCCCCGAAGCCCTTGCCAACACCGTTGAGATCGCCAAACGCTGTAACGTAACCGTGCGTCTTGGTGAATACTTCCTGCCGCAGTTCCCGACCGGGGACATGAGCACCGAAGATTATCTGGTCAAGCGTGCAAAAGAGGGCCTGGAAGAGCGTCTGGCCTTTTTATTCCCTGATGAGGAAGAACGTCTTAAGCGCCGCCCGGAATATGACGAACGTCTGGAGACTGAACTTCAGGTTATCAACCAGATGGGCTTCCCGGGCTACTTCCTCATCGTTATGGAATTTATCCAGTGGTCGAAAGATAACGGCGTACCGGTAGGGCCAGGCCGTGGCTCCGGTGCGGGTTCACTGGTGGCCTACGCGCTGAAAATCACCGACCTCGATCCGCTGGAATTTGACCTGCTGTTCGAACGTTTCCTTAACCCGGAACGTGTCTCCATGCCTGACTTCGACGTTGACTTCTGTATGGAGAAACGCGATCAGGTTATCGAGCACGTAGCGGACATGTACGGTCGTGATGCGGTATCGCAGATCATCACCTTCGGTACAATGGCGGCGAAAGCGGTGATCCGCGACGTAGGCCGCGTGCTGGGGCATCCGTACGGCTTTGTCGATCGTATCTCGAAACTGATCCCGCCCGATCCGGGGATGACGCTGGCGAAAGCGTTTGAAGCCGAGCCGCAGCTGCCGGAAATCTACGAAGCGGATGAAGAAGTTAAGGCGCTGATCGACATGGCGCGCAAACTGGAAGGGGTCACCCGTAACGCCGGTAAGCACGCCGGTGGGGTGGTTATCGCGCCGACCAAAATTACCGATTTTGCGCCGCTTTACTGCGATGAAGAGGGCAAACATCCGGTCACCCAGTTTGATAAAAGCGACGTTGAATACGCCGGACTGGTGAAGTTCGACTTCCTTGGTTTGCGTACGCTCACCATCATCAACTGGGCGCTGGAGATGATCAACAAGCGGCGGGCGAAGAATGGCGAGCCGCCGCTGGATATCGCTGCGATCCCGCTGGATGATAAGAAAAGCTTCGACATGCTGCAACGCTCGGAAACCACGGCGGTATTCCAGCTTGAATCGCGCGGCATGAAGGACCTGATCAAGCGTCTACAACCTGACTGCTTCGAAGATATGATCGCCCTAGTGGCACTGTTCCGCCCCGGTCCGTTGCAATCAGGGATGGTGGATAACTTTATCGACCGTAAACATGGTCGTGAAGAGATCTCCTATCCGGACGTACAGTGGCAGCATGAAAGCCTGAAACCGGTACTGGAGCCAACCTACGGCATTATCCTGTATCAGGAACAGGTCATGCAGATTGCGCAGGTGCTTTCTGGTTATACCCTCGGTGGCGCGGATATGCTGCGTCGTGCGATGGGTAAGAAAAAGCCGGAAGAGATGGCTAAGCAACGTTCTGTATTTGCTGAAGGTGCAGAAAAGAACGGAATCAACGCTGAACTGGCGATGAAAATCTTCGACCTGGTGGAGAAATTCGCTGGTTACGGATTTAACAAATCGCACTCTGCGGCCTATGCTTTGGTGTCATATCAAACGTTATGGCTGAAAGCGCACTATCCTGCGGAGTTTATGGCGGCGGTAATGACCGCCGATATGGACAACACCGAGAAGGTGGTGGGTCTGGTGGATGAGTGCTGGCGGATGGGGCTGAAAATCCTGCCACCAGATATAAACTCCGGTCTTTACCATTTCCACGTCAACGACGACGGCGAAATCGTGTATGGTATTGGCGCGATCAAAGGGGTCGGTGAAGGTCCGATTGAGGCCATCATCGAAGCCCGTAATAAAGGCGGCTACTTCCGCGAACTGTTTGATCTCTGCGCCCGTACCGACACCAAAAAGTTGAACCGTCGCGTGCTGGAAAAACTGATCATGTCCGGGGCGTTTGACCGTCTTGGGCCACATCGCGCAGCGCTGATGAACTCGCTGGGCGATGCGTTAAAAGCGGCAGATCAACACGCGAAAGCGGAAGCTATCGGTCAGGCCGATATGTTCGGCGTGCTGGCCGAAGAGCCGGAACAAATTGAACAATCCTACGCCAGCTGCCAACCGTGGCCGGAGCAGGTGGTATTAGATGGGGAACGTGAAACGTTAGGCCTGTACCTGACCGGACACCCTATCAACCAGTATTTAAAAGAGATTGAGCGTTATGTCGGAGGCGTAAGGCTGAAAGACATGCACCCGACAGAACGTGGTAAAGTCATCACGGCTGCGGGGCTCGTTGTTGCCGCGCGGGTTATGGTCACCAAGCGCGGCAATCGTATCGGTATCTGCACGCTGGATGACCGTTCCGGGCGGCTGGAAGTGATGTTGTTTACTGACGCCCTGGATAAATACCAGCAATTGCTGGAAAAAGACCGCATACTTATCGTCAGCGGACAGGTCAGCTTTGATGACTTCAGCGGTGGGCTTAAAATGACCGCTCGCGAAGTGATGGATATTGACGAAGCCCGGGAAAAATATGCTCGCGGGCTTGCTATCTCGCTGACGGACAGGCAAATTGATGACCAGCTTTTAAACCGACTCCGTCAGTCTCTGGAACCCCACCGCTCTGGGACAATTCCAGTACATCTCTACTATCAGAGGGCGGATGCACGCGCGCGGTTGCGTTTTGGCGCGACGTGGCGTGTCTCTCCGAGCGATCGTTTATTAAACGATCTCCGTGGCCTCATTGGTTCGGAGCAGGTGGAACTGGAGTTTGACTAA", 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"MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEEHFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDYLVKRAKEGLEERLAFLFPDEEERLKRRPEYDERLETELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFAEGAEKNGINAELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKEIERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDLRGLIGSEQVELEFD", - "protein_translation_length": 1160, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABD5" - ], - [ - "gene_synonym", - "GI:16128178" - ], - [ - "gene_synonym", - "accA" - ], - [ - "gene_synonym", - "ECK0184" - ], - [ - "gene_synonym", - "JW0180" - ], - [ - "gene_synonym", - "b0185" - ], - [ - "gene_synonym", - "EcoGene:EG11647" - ], - [ - "gene_synonym", - "NP_414727.1" - ], - [ - "gene_synonym", - "GeneID:944895" - ], - [ - "gene_synonym", - "ASAP:ABE-0000630" - ] - ], - "dna_sequence": "ATGAGTCTGAATTTCCTTGATTTTGAACAGCCGATTGCAGAGCTGGAAGCGAAAATCGATTCTCTGACTGCGGTTAGCCGTCAGGATGAGAAACTGGATATTAACATCGATGAAGAAGTGCATCGTCTGCGTGAAAAAAGCGTAGAACTGACACGTAAAATCTTCGCCGATCTCGGTGCATGGCAGATTGCGCAACTGGCACGCCATCCACAGCGTCCTTATACCCTGGATTACGTTCGCCTGGCATTTGATGAATTTGACGAACTGGCTGGCGACCGCGCGTATGCAGACGATAAAGCTATCGTCGGTGGTATCGCCCGTCTCGATGGTCGTCCGGTGATGATCATTGGTCATCAAAAAGGTCGTGAAACCAAAGAAAAAATTCGCCGTAACTTTGGTATGCCAGCGCCAGAAGGTTACCGCAAAGCACTGCGTCTGATGCAAATGGCTGAACGCTTTAAGATGCCTATCATCACCTTTATCGACACCCCGGGGGCTTATCCTGGCGTGGGCGCAGAAGAGCGTGGTCAGTCTGAAGCCATTGCACGCAACCTGCGTGAAATGTCTCGCCTCGGCGTACCGGTAGTTTGTACGGTTATCGGTGAAGGTGGTTCTGGCGGTGCGCTGGCGATTGGCGTGGGCGATAAAGTGAATATGCTGCAATACAGCACCTATTCCGTTATCTCGCCGGAAGGTTGTGCGTCCATTCTGTGGAAGAGCGCCGACAAAGCGCCGCTGGCGGCTGAAGCGATGGGTATCATTGCTCCGCGTCTGAAAGAACTGAAACTGATCGACTCCATCATCCCGGAACCACTGGGTGGTGCTCACCGTAACCCGGAAGCGATGGCGGCATCGTTGAAAGCGCAACTGCTGGCGGATCTGGCCGATCTCGACGTGTTAAGCACTGAAGATTTAAAAAATCGTCGTTATCAGCGCCTGATGAGCTACGGTTACGCGTAA", - "dna_sequence_length": 960, - "functions": [ - "acetyl-CoA carboxylase, carboxytransferase, alpha subunit" - ], - "id": "CDS_180", - "location": [ - [ - "NC_000913", - 208621, - "+", - 960 - ] - ], - "md5": "9fbafbfda38c934d6046e213ee86ecee", - "parent_gene": "", - "protein_md5": "ecad122ea2e955a8f798d20bffccbf20", - "protein_translation": "MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLREKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAHRNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGYA", - "protein_translation_length": 319, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ldc" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52095" - ], - [ - "gene_synonym", - "GI:16128179" - ], - [ - "gene_synonym", - "ldcH" - ], - [ - "gene_synonym", - "NP_414728.1" - ], - [ - "gene_synonym", - "EcoGene:EG13219" - ], - [ - "gene_synonym", - "ECK0185" - ], - [ - "gene_synonym", - "ldcC" - ], - [ - "gene_synonym", - "JW0181" - ], - [ - "gene_synonym", - "b0186" - ], - [ - "gene_synonym", - "GeneID:944887" - ], - [ - "gene_synonym", - "ASAP:ABE-0000633" - ], - [ - "gene_synonym", - "LDC2" - ] - ], - "dna_sequence": "ATGAACATCATTGCCATTATGGGACCGCATGGCGTCTTTTATAAAGATGAGCCCATCAAAGAACTGGAGTCGGCGCTGGTGGCGCAAGGCTTTCAGATTATCTGGCCACAAAACAGCGTTGATTTGCTGAAATTTATCGAGCATAACCCTCGAATTTGCGGCGTGATTTTTGACTGGGATGAGTACAGTCTCGATTTATGTAGCGATATCAATCAGCTTAATGAATATCTCCCGCTTTATGCCTTCATCAACACCCACTCGACGATGGATGTCAGCGTGCAGGATATGCGGATGGCGCTCTGGTTTTTTGAATATGCGCTGGGGCAGGCGGAAGATATCGCCATTCGTATGCGTCAGTACACCGACGAATATCTTGATAACATTACACCGCCGTTCACGAAAGCCTTGTTTACCTACGTCAAAGAGCGGAAGTACACCTTTTGTACGCCGGGGCATATGGGCGGCACCGCATATCAAAAAAGCCCGGTTGGCTGTCTGTTTTATGATTTTTTCGGCGGGAATACTCTTAAGGCTGATGTCTCTATTTCGGTCACCGAGCTTGGTTCGTTGCTCGACCACACCGGGCCACACCTGGAAGCGGAAGAGTACATCGCGCGGACTTTTGGCGCGGAACAGAGTTATATCGTTACCAACGGAACATCGACGTCGAACAAAATTGTGGGTATGTACGCCGCGCCATCCGGCAGTACGCTGTTGATCGACCGCAATTGTCATAAATCGCTGGCGCATCTGTTGATGATGAACGATGTAGTGCCAGTCTGGCTGAAACCGACGCGTAATGCGTTGGGGATTCTTGGTGGGATCCCGCGCCGTGAATTTACTCGCGACAGCATCGAAGAGAAAGTCGCTGCTACCACGCAAGCACAATGGCCGGTTCATGCGGTGATCACCAACTCCACCTATGATGGCTTGCTCTACAACACCGACTGGATCAAACAGACGCTGGATGTCCCGTCGATTCACTTCGATTCTGCCTGGGTGCCGTACACCCATTTTCATCCGATCTACCAGGGTAAAAGTGGTATGAGCGGCGAGCGTGTTGCGGGAAAAGTGATCTTCGAAACGCAATCGACCCACAAAATGCTGGCGGCGTTATCGCAGGCTTCGCTGATCCACATTAAAGGCGAGTATGACGAAGAGGCCTTTAACGAAGCCTTTATGATGCATACCACCACCTCGCCCAGTTATCCCATTGTTGCTTCGGTTGAGACGGCGGCGGCGATGCTGCGTGGTAATCCGGGCAAACGGCTGATTAACCGTTCAGTAGAACGAGCTCTGCATTTTCGCAAAGAGGTCCAGCGGCTGCGGGAAGAGTCTGACGGTTGGTTTTTCGATATCTGGCAACCGCCGCAGGTGGATGAAGCCGAATGCTGGCCCGTTGCGCCTGGCGAACAGTGGCACGGCTTTAACGATGCGGATGCCGATCATATGTTTCTCGATCCGGTTAAAGTCACTATTTTGACACCGGGGATGGACGAGCAGGGCAATATGAGCGAGGAGGGGATCCCGGCGGCGCTGGTAGCAAAATTCCTCGACGAACGTGGGATCGTAGTAGAGAAAACCGGCCCTTATAACCTGCTGTTTCTCTTTAGTATTGGCATCGATAAAACCAAAGCAATGGGATTATTGCGTGGGTTGACGGAATTCAAACGCTCTTACGATCTCAACCTGCGGATCAAAAATATGCTACCCGATCTCTATGCAGAAGATCCCGATTTCTACCGCAATATGCGTATTCAGGATCTGGCACAAGGGATCCATAAGCTGATTCGTAAACACGATCTTCCCGGTTTGATGTTGCGGGCATTCGATACTTTGCCGGAGATGATCATGACGCCACATCAGGCATGGCAACGACAAATTAAAGGCGAAGTAGAAACCATTGCGCTGGAACAACTGGTCGGTAGAGTATCGGCAAATATGATCCTGCCTTATCCACCGGGCGTACCGCTGTTGATGCCTGGAGAAATGCTGACCAAAGAGAGCCGCACAGTACTCGATTTTCTACTGATGCTTTGTTCCGTCGGGCAACATTACCCCGGTTTTGAAACGGATATTCACGGCGCGAAACAGGACGAAGACGGCGTTTACCGCGTACGAGTCCTAAAAATGGCGGGATAA", - "dna_sequence_length": 2142, - "functions": [ - "lysine decarboxylase 2, constitutive" - ], - "id": "CDS_181", - "location": [ - [ - "NC_000913", - 209679, - "+", - 2142 - ] - ], - "md5": "2a47e6b0fc7c713f1782939e6098af6d", - "parent_gene": "", - "protein_md5": "38161fdde05e685426cddf9bec774f52", - "protein_translation": "MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWDEYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWFFEYALGQAEDIAIRMRQYTDEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKHDLPGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLMPGEMLTKESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLKMAG", - "protein_translation_length": 713, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111096" - ], - [ - "gene_synonym", - "yaeR" - ], - [ - "gene_synonym", - "NP_414729.4" - ], - [ - "gene_synonym", - "JW0182" - ], - [ - "gene_synonym", - "EcoGene:EG13224" - ], - [ - "gene_synonym", - "ECK0186" - ], - [ - "gene_synonym", - "GeneID:944875" - ], - [ - "gene_synonym", - "b0187" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52096" - ], - [ - "gene_synonym", - "ASAP:ABE-0000635" - ] - ], - "dna_sequence": "ATGCTGGGTTTAAAACAGGTTCACCATATTGCGATTATTGCGACGGATTATGCGGTGAGCAAAGCTTTCTACTGCGATATTCTTGGTTTCACGCTGCAAAGCGAAGTCTATCGCGAAGCGCGCGACTCATGGAAAGGGGATTTGGCGCTTAATGGGCAATATGTGATTGAGCTTTTCTCATTTCCGTTCCCGCCGGAACGACCCAGCCGACCGGAAGCTTGCGGTCTGCGTCATCTGGCTTTTAGCGTTGATGACATCGATGCGGCAGTGGCGCACCTTGAAAGCCATAACGTGAAGTGTGAAACCATCCGTGTCGATCCATACACGCAAAAACGCTTCACCTTCTTTAACGATCCGGACGGGCTGCCGTTGGAACTGTATGAGCAGTAA", - "dna_sequence_length": 390, - "functions": [ - "putative lyase" - ], - "id": "CDS_182", - "location": [ - [ - "NC_000913", - 211877, - "+", - 390 - ] - ], - "md5": "0dfca0b72589d7917f4e6bd71c1bd194", - "parent_gene": "", - "protein_md5": "4b1e42e2cf1af9aa6558949461a02c9d", - "protein_translation": "MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDIDAAVAHLESHNVKCETIRVDPYTQKRFTFFNDPDGLPLELYEQ", - "protein_translation_length": 129, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944889" - ], - [ - "gene_synonym", - "EcoGene:EG13220" - ], - [ - "gene_synonym", - "JW0183" - ], - [ - "gene_synonym", - "ECK0187" - ], - [ - "gene_synonym", - "GI:16128181" - ], - [ - "gene_synonym", - "mesJ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52097" - ], - [ - "gene_synonym", - "tilS" - ], - [ - "gene_synonym", - "ASAP:ABE-0000638" - ], - [ - "gene_synonym", - "NP_414730.1" - ], - [ - "gene_synonym", - "yaeN" - ], - [ - "gene_synonym", - "b0188" - ] - ], - "dna_sequence": "ATGACACTCACGCTCAATAGACAACTTCTCACCTCACGCCAGATTCTGGTGGCCTTTAGCGGCGGGCTTGACTCCACCGTTCTGCTGCATCAGTTGGTGCAGTGGCGGACGGAAAATCCGGGTGTCGCTCTGCGCGCTATTCATGTGCATCACGGTTTAAGTGCCAATGCCGATGCCTGGGTTACGCATTGCGAAAACGTCTGCCAACAGTGGCAGGTGCCGCTGGTGGTCGAACGCGTACAACTTGCGCAAGAAGGACTGGGCATTGAGGCCCAGGCGCGGCAGGCACGTTATCAGGCATTTGCCCGCACCTTGTTGCCCGGTGAAGTGCTGGTCACCGCGCAACATCTCGACGATCAATGTGAAACCTTTCTGCTGGCGCTAAAACGCGGCAGTGGCCCTGCCGGGCTTTCGGCTATGGCGGAAGTCTCGGAGTTTGCCGGAACGCGGCTTATTCGCCCGTTGCTCGCCCGCACGCGGGGGGAACTGGTGCAGTGGGCGCGTCAGTATGATTTACGCTGGATTGAAGACGAAAGTAATCAGGACGACTCATACGATCGTAACTTTCTGCGCCTGCGCGTAGTGCCGTTATTGCAGCAGCGTTGGCCGCATTTTGCCGAAGCAACGGCCCGCAGCGCCGCACTTTGTGCTGAACAAGAGAGCCTGCTGGATGAACTGCTGGCAGATGATTTAGCACACTGTCAATCGCCGCAGGGGACGCTGCAGATTGTGCCAATGCTGGCGATGAGTGATGCCCGCCGCGCGGCGATTATCCGCCGCTGGCTGGCAGGGCAGAATGCACCGATGCCTTCCCGCGACGCGTTGGTGAGGATCTGGCAGGAAGTGGCGCTGGCGCGGGAAGATGCCTCACCCTGTTTACGTTTGGGCGCGTTTGAAATCCGACGCTATCAGTCGCAACTGTGGTGGATTAAATCCGTCACCGGGCAAAGCGAAAACATTGTGCCGTGGCAGACGTGGCTTCAACCGCTGGAATTACCGGCGGGGCTGGGAAGTGTACAGCTTAATGCGGGAGGCGATATTCGCCCTCCGCGTGCAGACGAAGCGGTCAGCGTGCGTTTCAAAGCGCCAGGATTGCTGCATATTGTCGGGCGTAACGGCGGACGTAAGCTAAAGAAAATCTGGCAAGAGCTGGGCGTGCCGCCGTGGCTACGTGACACCACGCCACTGCTGTTTTATGGCGAAACGCTGATTGCGGCGGCAGGGGTATTTGTGACGCAAGAAGGTGTGGCTGAAGGTGAGAATGGCGTAAGTTTTGTCTGGCAGAAAACGCTTAGTTAA", - "dna_sequence_length": 1299, - "functions": [ - "tRNA(Ile)-lysidine synthetase" - ], - "id": "CDS_183", - "location": [ - [ - "NC_000913", - 212331, - "+", - 1299 - ] - ], - "md5": "9669b6092dc369c1076f128c0173a880", - "parent_gene": "", - "protein_md5": "7e96182a6a7bd0ee063ff97c2ae41716", - "protein_translation": "MTLTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFARTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLARTRGELVQWARQYDLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAEQESLLDELLADDLAHCQSPQGTLQIVPMLAMSDARRAAIIRRWLAGQNAPMPSRDALVRIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKSVTGQSENIVPWQTWLQPLELPAGLGSVQLNAGGDIRPPRADEAVSVRFKAPGLLHIVGRNGGRKLKKIWQELGVPPWLRDTTPLLFYGETLIAAAGVFVTQEGVAEGENGVSFVWQKTLS", - "protein_translation_length": 432, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0188" - ], - [ - "gene_synonym", - "GI:90111097" - ], - [ - "gene_synonym", - "NP_414731.2" - ], - [ - "gene_synonym", - "EcoGene:EG13221" - ], - [ - "gene_synonym", - "JW0184" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFW8" - ], - [ - "gene_synonym", - "rof" - ], - [ - "gene_synonym", - "mesJ" - ], - [ - "gene_synonym", - "ASAP:ABE-0000641" - ], - [ - "gene_synonym", - "yaeO" - ], - [ - "gene_synonym", - "GeneID:944891" - ], - [ - "gene_synonym", - "b0189" - ] - ], - "dna_sequence": "ATGAATGATACGTATCAACCAATCAATTGTGATGATTACGATAATCTTGAGCTCGCCTGCCAGCATCATTTAATGCTGACACTTGAGCTGAAAGATGGCGAAAAATTGCAGGCAAAAGCCAGTGATTTAGTCTCCCGCAAAAATGTGGAGTACCTGGTCGTCGAGGCCGCTGGCGAAACCCGCGAGCTGCGTCTGGATAAAATTACCAGCTTTAGCCACCCGGAAATCGGTACGGTGGTGGTAAGCGAATCCTGA", - "dna_sequence_length": 255, - "functions": [ - "modulator of Rho-dependent transcription termination" - ], - "id": "CDS_184", - "location": [ - [ - "NC_000913", - 213932, - "-", - 255 - ] - ], - "md5": "6de21caf08154416df4ceed43738ac71", - "parent_gene": "", - "protein_md5": "9cb665f7074f000617fa722ab8ef0030", - "protein_translation": "MNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASDLVSRKNVEYLVVEAAGETRELRLDKITSFSHPEIGTVVVSES", - "protein_translation_length": 84, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0189" - ], - [ - "gene_synonym", - "GeneID:1450233" - ], - [ - "gene_synonym", - "EcoGene:EG13222" - ], - [ - "gene_synonym", - "yaeP" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8K5" - ], - [ - "gene_synonym", - "JW0185" - ], - [ - "gene_synonym", - "b4406" - ], - [ - "gene_synonym", - "GI:49176004" - ], - [ - "gene_synonym", - "ASAP:ABE-0047214" - ], - [ - "gene_synonym", - "YP_026160.1" - ] - ], - "dna_sequence": "GTGGAAAAATATTGTGAGTTAATACGCAAGCGGTACGCGGAAATCGCCAGCGGAGACTTAGGATACGTTCCGGACGCGCTGGGCTGCGTTTTGAAAGTGCTGAATGAAATGGCTGCCGACGACGCCCTTTCTGAGGCTGTCAGGGAAAAAGCAGCATACGCTGCGGCAAACTTACTGGTGAGCGATTATGTCAATGAATGA", - "dna_sequence_length": 201, - "functions": [ - "UPF0253 family protein" - ], - "id": "CDS_185", - "location": [ - [ - "NC_000913", - 214125, - "-", - 201 - ] - ], - "md5": 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"ATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACCAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAATTTACCCGTGGTTTGTGTGCCGATGATGAGCCGGAAGCGTGGCTGCGTAACGATCACCTGGGCATTGATTTGTGGATTGAGCTGGGGCTGCCGGATGAGCGGCGGATTAAGAAAGCCTGCACCCAGGCCGCAGAAGTGGCGCTGTTTACCTATAATAGTCGGGCGGCGCAAATCTGGTGGCAGCAAAATCAGAGCAAATGTGTGCAGTTTGCCAATCTTTCCGTCTGGTATCTGGACGATGAACAACTGGCGAAAGTAAGCGCCTTTGCCGATCGTACCATGACGCTGCAGGCAACGATTCAGGATGGCGTGATCTGGTTATCGGATGATAAGAATAATCTGGAAGTGAACTTAACCGCCTGGCAACAACCTTCATGA", - "dna_sequence_length": 546, - "functions": [ - "PDDEXK superfamily protein" - ], - "id": "CDS_186", - "location": [ - [ - "NC_000913", - 214291, - "+", - 546 - ] - ], - "md5": "2c9f0348ede84579f4354cec96f207c4", - "parent_gene": "", - "protein_md5": "5c5cbe2cf9268e395b232384268c3254", - "protein_translation": "MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRLLAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGVIWLSDDKNNLEVNLTAWQQPS", - "protein_translation_length": 181, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128184" - ], - [ - "gene_synonym", - "JW0187" - ], - [ - "gene_synonym", - "EcoGene:EG12354" - ], - [ - "gene_synonym", - "ASAP:ABE-0000650" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P40711" - ], - [ - "gene_synonym", - "b0191" - ], - [ - "gene_synonym", - "NP_414733.1" - ], - [ - "gene_synonym", - "ECK0191" - ], - [ - "gene_synonym", - "GeneID:946046" - ], - [ - "gene_synonym", - "arfB" - ], - [ - "gene_synonym", - "yaeJ" - ] - ], - "dna_sequence": "ATGATTGTGATTTCCCGACATGTTGCTATTCCCGATGGTGAGCTTGAGATCACCGCCATTCGTGCGCAGGGCGCGGGCGGGCAGCATGTTAATAAGACCTCAACGGCTATTCATCTGCGTTTTGACATTCGGGCGTCCAGCCTGCCAGAGTATTACAAAGAGCGTCTGCTCGCCGCCAGCCATCATTTGATCAGCAGTGATGGCGTGATTGTCATTAAGGCACAGGAATACCGCAGTCAGGAACTGAACCGCGAAGCAGCTCTGGCCCGGCTGGTGGCTATGATTAAAGAATTAACAACAGAAAAAAAAGCCCGACGACCCACGCGGCCCACCCGTGCATCGAAAGAGCGCAGGCTGGCATCGAAAGCACAAAAATCAAGCGTGAAGGCGATGCGCGGCAAAGTGCGCAGCGGTCGGGAATAA", - "dna_sequence_length": 423, - "functions": [ - "alternative stalled-ribosome rescue factor B", - "peptidyl-tRNA hydrolase, ribosome-attached" - ], - "id": "CDS_187", - "location": [ - [ - "NC_000913", - 214833, - "+", - 423 - ] - ], - "md5": "b71ea4a689dc65a357336e3d83902666", - "parent_gene": "", - "protein_md5": "bf929418f511765a3781435504d335f2", - "protein_translation": "MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQELNREAALARLVAMIKELTTEKKARRPTRPTRASKERRLASKAQKSSVKAMRGKVRSGRE", - "protein_translation_length": 140, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cutF" - ], - [ - "gene_synonym", - "JW0188" - ], - [ - "gene_synonym", - "NP_414734.1" - ], - [ - "gene_synonym", - "nlpE" - ], - [ - "gene_synonym", - "GI:16128185" - ], - [ - "gene_synonym", - "GeneID:946782" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P40710" - ], - [ - "gene_synonym", - "ECK0192" - ], - [ - "gene_synonym", - "b0192" - ], - [ - "gene_synonym", - "ASAP:ABE-0000652" - ], - [ - "gene_synonym", - "EcoGene:EG12137" - ] - ], - "dna_sequence": "ATGGTGAAAAAAGCGATAGTGACAGCGATGGCTGTAATCAGCCTCTTTACTCTGATGGGATGTAATAATCGGGCCGAAGTCGATACGCTTTCTCCGGCGCAGGCTGCCGAACTGAAACCGATGCCGCAAAGTTGGCGCGGCGTGCTGCCGTGTGCCGATTGCGAAGGAATCGAAACCTCTCTGTTCCTCGAAAAAGACGGAACATGGGTGATGAATGAGCGTTATCTCGGTGCTCGTGAAGAACCTTCCTCCTTCGCTTCCTACGGTACATGGGCGCGAACCGCTGACAAGCTGGTATTAACCGACAGCAAAGGTGAAAAGTCATATTATCGGGCGAAAGGCGATGCGCTGGAGATGCTCGATCGTGAAGGCAATCCGATTGAATCGCAGTTCAACTATACGCTGGAAGCGGCACAATCCAGTTTACCTATGACGCCGATGACCCTGCGGGGCATGTATTTTTATATGGCTGATGCGGCGACCTTCACTGATTGCGCGACCGGAAAACGTTTCATGGTAGCGAATAACGCAGAGCTGGAGCGTAGCTACCTGGCTGCGCGCGGTCACAGTGAAAAACCGGTGTTACTGTCAGTAGAAGGTCACTTTACGCTTGAGGGTAATCCGGATACCGGTGCGCCGACTAAAGTATTGGCACCCGATACGGCAGGGAAATTTTACCCCAACCAGGATTGCAGTAGTTTGGGGCAGTAA", - "dna_sequence_length": 711, - "functions": [ - "lipoprotein involved with copper homeostasis and adhesion" - ], - "id": "CDS_188", - "location": [ - [ - "NC_000913", - 215269, - "+", - 711 - ] - ], - "md5": "a5d55ea98f2299eebfe3caf1011791ff", - "parent_gene": "", - "protein_md5": "840a02f89b25b531d46615add518a845", - "protein_translation": "MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQSWRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTDSKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEAAQSSLPMTPMTLRGMYFYMADAATFTDCATGKRFMVANNAELERSYLAARGHSEKPVLLSVEGHFTLEGNPDTGAPTKVLAPDTAGKFYPNQDCSSLGQ", - "protein_translation_length": 236, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414735.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37056" - ], - [ - "gene_synonym", - "GI:90111098" - ], - [ - "gene_synonym", - "JW5016" - ], - [ - "gene_synonym", - "GeneID:944892" - ], - [ - "gene_synonym", - "yaeF" - ], - [ - "gene_synonym", - "ECK0193" - ], - [ - "gene_synonym", - "b0193" - ], - [ - "gene_synonym", - "ASAP:ABE-0000655" - ], - [ - "gene_synonym", - "EcoGene:EG12138" - ], - [ - "gene_synonym", - "yaeK" - ] - ], - "dna_sequence": "ATGGATAAACCAAAGGCGTACTGCCGCCTGTTTCTCCCCAGCTTTCTTTTACTTTCGGCTTGTACCGTTGATATCAGCCAGCCAGACCCATCAGCCACAGCAGTAGATGCCGAGGCAAAAACATGGGCTGTCAAATTCCAGCATCAAAGCTCTTTCACCGAACAATCAATAAAAGAAATAACGGCACCTGATCTCAAACCCGGCGATTTGCTGTTCTCCTCAAGCCTTGGGGTAACCTCATTTGGAATCCGCGTCTTCAGCACTTCCTCTGTGAGTCACGTTGCAATCTTTCTGGGTGATAATAACGTTGCAGAAGCGACAGGCGCTGGCGTCCAGATCGTTTCCCTTAAAAAAGCGATGAAGCATAGTGATAAGCTTTTCGTCTTACGAGTCCCGGATCTTACCCCGCAACAAGCCACAGATATCACCGCGTTTGCCAATAAAATCAAAGATAGCGGTTATAACTATCGCGGCATTGTCGAATTTATTCCCTTTATGGTGACTCGCCAGATGTGCTCACTGAATCCGTTCTCCGAGGATTTTCGCCAACAGTGCGTCAGCGGCCTGGCGAAAGCGCAGTTAAGCAGTGTGGGCGAAGGAGACAAAAAGTCGTGGTTTTGTTCGGAATTTGTCACGGATGCCTTTGCCAAAGCCGGGCATCCACTTACACTGGCGCAATCGGGCTGGATTAGCCCTGCCGATCTGATGCATATGCGTATTGGTGATGTCTCTGCGTTTAAGCCAGAAACGCAGTTACAGTATGTTGGGCACCTGAAGCCTGGGATTTATATCAAGGCGGGTCGCTTTGTTGGTTTGACCCGGTGA", - "dna_sequence_length": 825, - "functions": [ - "putative lipoprotein" - ], - "id": "CDS_189", - "location": [ - [ - "NC_000913", - 217003, - "-", - 825 - ] - ], - "md5": 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"ATGCGTACTAGCCAATACCTGCTCTCCACTCTCAAGGAGACACCTGCCGACGCCGAGGTGATCAGCCATCAGCTGATGCTGCGCGCCGGGATGATCCGCAAGCTGGCCTCCGGGTTATATACCTGGCTGCCGACCGGCGTGCGCGTTCTGAAAAAAGTCGAAAACATCGTGCGTGAAGAGATGAACAACGCCGGTGCGATCGAGGTGTCGATGCCGGTGGTTCAGCCAGCCGATTTGTGGCAAGAGAGTGGTCGTTGGGAACAGTACGGTCCGGAACTGCTGCGTTTTGTTGACCGTGGCGAGCGTCCGTTCGTACTCGGCCCAACTCATGAAGAAGTTATCACTGACCTGATTCGTAACGAGCTTAGCTCTTACAAACAGCTGCCGCTGAACTTCTATCAGATCCAGACCAAGTTCCGCGACGAAGTGCGTCCGCGTTTCGGCGTCATGCGTTCCCGCGAATTCCTGATGAAAGATGCTTACTCTTTCCATACTTCTCAGGAATCCCTGCAGGAAACCTACGATGCAATGTATGCGGCCTACAGCAAAATCTTCAGCCGCATGGGGCTGGATTTCCGCGCCGTACAAGCCGACACCGGTTCTATCGGCGGCAGCGCCTCTCACGAATTCCAGGTGCTGGCGCAGAGCGGTGAAGACGATGTGGTCTTCTCCGACACCTCTGACTATGCAGCGAACATTGAACTGGCAGAAGCTATCGCGCCGAAAGAACCGCGCGCTGCTGCTACCCAGGAAATGACGCTGGTTGATACGCCGAACGCGAAAACCATCGCGGAACTGGTTGAACAGTTCAATCTGCCGATTGAGAAAACGGTTAAGACTCTGCTGGTTAAAGCGGTTGAAGGCAGCAGCTTCCCGCAGGTTGCGCTGCTGGTGCGCGGTGATCACGAGCTGAACGAAGTTAAAGCAGAAAAACTGCCGCAGGTTGCAAGCCCGCTGACTTTCGCGACCGAAGAAGAAATTCGTGCCGTGGTTAAAGCCGGTCCGGGTTCACTGGGTCCGGTAAACATGCCGATTCCGGTGGTGATTGACCGTACCGTTGCGGCGATGAGTGATTTCGCTGCTGGTGCTAACATCGATGGTAAACACTACTTCGGCATCAACTGGGATCGCGATGTCGCTACCCCGGAAGTTGCAGATATCCGTAACGTGGTGGCTGGCGATCCAAGCCCGGATGGCCAGGGTAGGCTGCTGATCAAACGTGGTATCGAAGTTGGTCACATCTTCCAGCTGGGTACCAAGTACTCCGAAGCACTGAAAGCCTCCGTACAGGGTGAAGATGGCCGTAACCAAATCCTGACGATGGGTTGCTACGGTATCGGGGTAACGCGTGTGGTAGCTGCGGCGATTGAGCAGAACTACGACGAACGAGGCATCGTATGGCCTGACGCTATCGCGCCGTTCCAGGTGGCGATTCTGCCGATGAACATGCACAAATCCTTCCGCGTACAAGAGCTTGCTGAGAAACTGTACAGCGAACTGCGTGCACAAGGTATCGAAGTGCTGCTGGATGACCGCAAAGAGCGTCCGGGCGTGATGTTTGCTGATATGGAACTGATCGGTATTCCGCACACTATTGTGCTGGGCGACCGTAACCTCGACAACGACGATATCGAATATAAATATCGTCGCAACGGCGAGAAACAGTTAATTAAGACTGGTGACATCGTCGAATATCTGGTGAAACAGATTAAAGGCTGA", 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- [ - "gene_synonym", - "GI:16128188" - ], - [ - "gene_synonym", - "ASAP:ABE-0000661" - ], - [ - "gene_synonym", - "JW0191" - ], - [ - "gene_synonym", - "EcoGene:EG11503" - ], - [ - "gene_synonym", - "b0195" - ], - [ - "gene_synonym", - "NP_414737.1" - ], - [ - "gene_synonym", - "ECK0195" - ], - [ - "gene_synonym", - "GeneID:949112" - ], - [ - "gene_synonym", - "yaeB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28634" - ] - ], - "dna_sequence": "ATGAGCAGTTTCCAGTTCGAGCAAATAGGCGTTATTCGCTCGCCCTATAAAGAAAAGTTCGCCGTTCCGCGCCAGCCAGGTCTGGTAAAAAGCGCCAACGGCGAACTGCATCTCATTGCTCCCTACAACCAGGCCGACGCCGTTCGCGGCCTGGAAGCGTTCAGCCATTTATGGATCCTTTTCGTCTTTCATCAAACGATGGAAGGCGGCTGGCGTCCGACTGTGCGTCCACCGCGCCTCGGCGGTAACGCCAGAATGGGGGTTTTCGCAACACGCTCTACTTTCCGCCCTAACCCAATTGGCATGTCGCTGGTAGAGCTGAAAGAGGTTGTTTGCCATAAAGACAGCGTGATTCTGAAGCTCGGCAGTCTGGATCTGGTCGATGGTACGCCGGTAGTGGATATCAAACCGTATCTCCCCTTTGCCGAATCGCTTCCCGATGCCAGTGCCAGCTATGCGCAAAGTGCGCCAGCTGCAGAGATGGCGGTGAGTTTTACCGCAGAGGTCGAAAAGCAGCTTTTGACGCTGGAGAAGCGTTATCCGCAGTTAACGCTGTTTATCCGCGAAGTACTGGCGCAGGACCCGCGCCCGGCCTATCGTAAAGGTGAGGAAACGGGCAAAACCTATGCCGTCTGGCTACATGATTTTAACGTTCGCTGGCGCGTCACCGACGCAGGTTTTGAAGTCTTTGCGCTGGAACCGCGTTAA", - "dna_sequence_length": 708, - "functions": [ - "tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase, SAM-dependent" - ], - "id": "CDS_191", - "location": [ - [ - "NC_000913", - 219594, - "-", - 708 - ] - ], - "md5": "44978ca36fb242b415338960bdd0d366", - "parent_gene": "", - "protein_md5": "7362a2591a895bf47e3333890b401d15", - "protein_translation": "MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGMSLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAEMAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYRKGEETGKTYAVWLHDFNVRWRVTDAGFEVFALEPR", - "protein_translation_length": 235, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128189" - ], - [ - "gene_synonym", - "rcsF" - ], - [ - "gene_synonym", - "EcoGene:EG11502" - ], - [ - "gene_synonym", - "GeneID:949113" - ], - [ - "gene_synonym", - "JW0192" - ], - [ - "gene_synonym", - "ECK0196" - ], - [ - "gene_synonym", - "NP_414738.1" - ], - [ - "gene_synonym", - "b0196" - ], - [ - "gene_synonym", - "ASAP:ABE-0000663" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69411" - ] - ], - "dna_sequence": "ATGCGTGCTTTACCGATCTGTTTAGTAGCACTCATGCTAAGCGGCTGTTCCATGTTAAGCAGATCCCCTGTCGAACCCGTTCAAAGCACTGCACCCCAGCCGAAAGCGGAGCCTGCAAAACCGAAAGCGCCGCGCGCCACGCCGGTCCGAATTTATACCAATGCAGAAGAATTAGTCGGCAAACCGTTCCGCGATCTCGGTGAAGTCAGTGGCGACTCTTGCCAGGCCTCTAATCAGGACTCTCCGCCGAGCATTCCAACCGCACGTAAGCGGATGCAAATCAACGCCTCTAAAATGAAAGCCAATGCTGTATTACTGCATAGCTGCGAAGTCACCAGCGGTACGCCAGGCTGCTATCGTCAGGCTGTATGTATCGGTTCTGCGCTTAACATTACGGCGAAATGA", - "dna_sequence_length": 405, - "functions": [ - "putative outer membrane protein" - ], - "id": "CDS_192", - "location": [ - [ - "NC_000913", - 219995, - "-", - 405 - ] - ], - "md5": "5b6470713f646080f71e2895e2a5ed48", - "parent_gene": "", - "protein_md5": "0ea44a49b70285717a7432533a30b5a1", - "protein_translation": "MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKANAVLLHSCEVTSGTPGCYRQAVCIGSALNITAK", - "protein_translation_length": 134, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "metQ" - ], - [ - "gene_synonym", - "yaeC" - ], - [ - "gene_synonym", - "EcoGene:EG11504" - ], - [ - "gene_synonym", - "JW0193" - ], - [ - "gene_synonym", - "GI:16128190" - ], - [ - "gene_synonym", - "ECK0197" - ], - [ - "gene_synonym", - "b0197" - ], - [ - "gene_synonym", - "metD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28635" - ], - [ - "gene_synonym", - "ASAP:ABE-0000666" - ], - [ - "gene_synonym", - "GeneID:944893" - ], - [ - "gene_synonym", - "NP_414739.1" - ] - ], - "dna_sequence": "ATGGCGTTCAAATTCAAAACCTTTGCGGCAGTGGGAGCCCTGATCGGATCACTGGCACTGGTAGGCTGCGGTCAGGATGAAAAAGATCCAAACCACATTAAAGTCGGCGTGATTGTTGGTGCCGAACAGCAGGTTGCAGAAGTCGCGCAGAAAGTTGCGAAAGACAAATATGGCCTGGACGTTGAGCTGGTAACCTTCAACGACTATGTTCTGCCAAACGAAGCATTGAGCAAAGGCGATATCGACGCCAACGCCTTCCAGCATAAACCGTACCTTGATCAGCAACTGAAAGATCGTGGCTACAAACTGGTCGCAGTAGGCAACACTTTTGTTTATCCGATTGCTGGTTACTCCAAGAAAATCAAATCACTGGATGAACTGCAGGATGGTTCGCAGGTTGCCGTGCCAAACGACCCAACTAACCTTGGTCGTTCACTGCTGCTGCTGCAAAAAGTGGGCTTGATCAAACTGAAAGATGGCGTTGGCCTGCTGCCGACCGTTCTTGATGTTGTTGAGAACCCCAAAAATCTGAAAATTGTTGAACTGGAAGCACCGCAACTGCCGCGTTCTCTGGACGACGCGCAAATCGCTCTGGCAGTTATCAATACCACCTATGCCAGCCAGATTGGCCTGACTCCGGCGAAAGACGGTATCTTTGTTGAAGATAAAGAGTCCCCGTACGTAAACCTGATCGTGACGCGTGAAGATAACAAAGACGCCGAGAACGTGAAGAAATTCGTCCAGGCTTATCAGTCTGACGAAGTTTACGAAGCAGCAAACAAAGTGTTTAACGGCGGAGCTGTTAAAGGCTGGTAA", - "dna_sequence_length": 816, - "functions": [ - "DL-methionine transporter subunit" - ], - "id": "CDS_193", - "location": [ - [ - "NC_000913", - 220928, - "-", - 816 - ] - ], - "md5": "e7d787291b3bb1c3efe9b58a772256c0", - "parent_gene": "", - "protein_md5": "28a7814aeb6b097d83e34aff5982e20b", - "protein_translation": "MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQVAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYKLVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDGVGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGIFVEDKESPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW", - "protein_translation_length": 271, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944894" - ], - [ - "gene_synonym", - "JW0194" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31547" - ], - [ - "gene_synonym", - "GI:16128191" - ], - [ - "gene_synonym", - "yaeE" - ], - [ - "gene_synonym", - "EcoGene:EG11737" - ], - [ - "gene_synonym", - "metD" - ], - [ - "gene_synonym", - "NP_414740.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000668" - ], - [ - "gene_synonym", - "metI" - ], - [ - "gene_synonym", - "b0198" - ], - [ - "gene_synonym", - "ECK0198" - ] - ], - "dna_sequence": "ATGTCTGAGCCGATGATGTGGCTGCTGGTTCGTGGCGTATGGGAAACGCTGGCAATGACCTTCGTATCCGGTTTTTTTGGCTTTGTGATTGGTCTGCCGGTTGGCGTTCTGCTTTATGTCACGCGTCCGGGGCAAATTATTGCTAACGCGAAGCTGTATCGTACCGTTTCTGCGATTGTGAACATTTTCCGTTCCATCCCGTTCATTATCTTGCTTGTATGGATGATTCCGTTTACCCGCGTTATTGTCGGTACATCGATTGGTTTGCAGGCAGCGATTGTTCCGTTAACCGTTGGTGCAGCACCGTTTATTGCCCGTATGGTCGAGAACGCTCTGCTGGAGATCCCAACCGGGTTAATTGAAGCTTCCCGCGCAATGGGTGCCACGCCGATGCAGATCGTCCGTAAGGTGCTGTTACCGGAAGCGCTGCCGGGTCTGGTGAATGCGGCAACTATCACCCTGATTACCCTGGTCGGTTATTCCGCGATGGGTGGTGCAGTCGGTGCCGGTGGTTTAGGTCAGATTGGCTATCAGTATGGCTACATCGGCTATAACGCGACGGTGATGAATACGGTACTGGTATTGCTGGTCATTCTGGTTTATTTAATTCAGTTCGCAGGCGACCGCATCGTCCGGGCTGTCACTCGCAAGTAA", - "dna_sequence_length": 654, - "functions": [ - "DL-methionine transporter subunit" - ], - "id": "CDS_194", - "location": [ - [ - "NC_000913", - 221621, - "-", - 654 - ] - ], - "md5": "1802f8755fc0752ce187f56d26b82316", - "parent_gene": "", - "protein_md5": "8cc05077228007da2d3a7bf7635361b4", - "protein_translation": "MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK", - "protein_translation_length": 217, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "abc" - ], - [ - "gene_synonym", - "JW0195" - ], - [ - "gene_synonym", - "metN" - ], - [ - "gene_synonym", - "NP_414741.1" - ], - [ - "gene_synonym", - "GI:16128192" - ], - [ - "gene_synonym", - "ASAP:ABE-0000671" - ], - [ - "gene_synonym", - "metD" - ], - [ - "gene_synonym", - "GeneID:944896" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30750" - ], - [ - "gene_synonym", - "b0199" - ], - [ - "gene_synonym", - "EcoGene:EG11621" - ], - [ - "gene_synonym", - "ECK0199" - ] - ], - "dna_sequence": "ATGATAAAACTTTCGAATATCACCAAAGTGTTCCACCAGGGCACCCGCACCATCCAGGCGTTGAACAACGTCAGCCTGCATGTGCCAGCTGGACAAATTTATGGCGTTATCGGTGCCTCAGGCGCGGGTAAGAGTACGCTTATACGTTGTGTAAACCTGCTGGAGCGCCCAACCGAGGGTAGCGTGCTGGTCGATGGCCAGGAACTGACCACGCTGTCAGAATCCGAGTTGACCAAAGCTCGCCGCCAGATTGGTATGATTTTCCAGCATTTTAACCTGCTCTCTTCGCGTACTGTTTTTGGCAACGTGGCTCTGCCGCTGGAGCTGGACAACACACCGAAAGACGAGGTCAAACGTCGCGTGACGGAATTGCTGTCATTGGTTGGTCTTGGCGATAAGCATGATAGCTACCCGTCGAATCTTTCCGGTGGGCAGAAACAACGTGTGGCAATTGCCCGTGCGTTAGCCAGCAATCCCAAAGTATTGCTGTGTGATGAAGCCACCAGCGCGCTGGACCCGGCAACGACACGTTCTATTCTCGAACTGCTGAAAGACATCAACCGCCGTCTGGGGTTGACGATTCTGTTGATCACCCACGAAATGGACGTTGTGAAGCGCATTTGTGATTGCGTGGCGGTCATCAGCAATGGAGAACTGATCGAGCAGGACACGGTAAGTGAAGTGTTCTCGCATCCGAAAACGCCGCTGGCGCAGAAGTTTATTCAGTCGACCCTGCATCTGGATATCCCGGAAGATTACCAGGAACGTCTGCAAGCGGAGCCATTTACTGACTGCGTGCCGATGCTGCGTCTGGAGTTTACCGGTCAATCGGTCGATGCCCCACTGCTTTCTGAAACCGCGCGTCGTTTCAACGTCAACAACAACATTATTAGCGCGCAGATGGATTACGCCGGTGGCGTTAAGTTCGGCATCATGCTGACTGAAATGCACGGCACACAACAAGATACGCAAGCCGCCATTGCCTGGCTGCAGGAACACCATGTAAAAGTAGAGGTACTGGGTTATGTCTGA", 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"gene_synonym", - "GI:16128193" - ], - [ - "gene_synonym", - "yaeD" - ], - [ - "gene_synonym", - "b0200" - ], - [ - "gene_synonym", - "ASAP:ABE-0000675" - ], - [ - "gene_synonym", - "gmbC" - ], - [ - "gene_synonym", - "wcbN" - ], - [ - "gene_synonym", - "gmhX" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63228" - ], - [ - "gene_synonym", - "EcoGene:EG11736" - ] - ], - "dna_sequence": "GTGGCGAAGAGCGTACCCGCAATTTTTCTTGACCGTGATGGCACCATTAATGTCGATCACGGCTATGTCCATGAGATCGACAACTTTGAATTTATCGACGGTGTTATTGACGCCATGCGCGAGCTAAAAAAAATGGGCTTTGCGCTGGTGGTAGTAACCAACCAGTCTGGCATTGCTCGCGGTAAATTTACCGAAGCACAGTTTGAAACGCTGACCGAGTGGATGGACTGGTCGCTGGCGGACCGAGATGTCGATCTGGATGGTATCTATTATTGCCCGCATCATCCGCAGGGTAGTGTTGAAGAGTTTCGCCAGGTCTGCGATTGCCGCAAACCACATCCGGGGATGCTTTTGTCAGCACGCGATTATTTGCATATTGATATGGCCGCTTCTTATATGGTGGGCGATAAATTAGAAGATATGCAGGCAGCGGTTGCGGCGAACGTGGGAACAAAAGTGCTGGTGCGTACGGGTAAACCTATTACGCCTGAAGCAGAAAACGCGGCGGATTGGGTGTTAAATAGCCTGGCAGACCTGCCGCAAGCGATAAAAAAGCAGCAAAAACCGGCACAATGA", - "dna_sequence_length": 576, - "functions": [ - "D,D-heptose 1,7-bisphosphate phosphatase" - ], - "id": "CDS_196", - "location": [ - [ - "NC_000913", - 222833, - "+", - 576 - ] - ], - "md5": "7c2495adda8d845ef6d77d2c51973aeb", - "parent_gene": "", - "protein_md5": "034879e842467f417452367367849a0f", - "protein_translation": "MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAIKKQQKPAQ", - "protein_translation_length": 191, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944901" - ], - [ - "gene_synonym", - "JW0197" - ], - [ - "gene_synonym", - "GI:16128194" - ], - [ - "gene_synonym", - "ECK0207" - ], - [ - "gene_synonym", - "yafB" - ], - [ - "gene_synonym", - "dkgB" - ], - [ - "gene_synonym", - "b0207" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30863" - ], - [ - "gene_synonym", - "NP_414743.1" - ], - [ - "gene_synonym", - "EcoGene:EG11648" - ], - [ - "gene_synonym", - "ASAP:ABE-0000692" - ] - ], - "dna_sequence": "ATGGCTATCCCTGCATTTGGTTTAGGTACTTTCCGTCTGAAAGACGACGTTGTTATTTCATCTGTGATAACGGCGCTTGAACTTGGTTATCGCGCAATTGATACCGCACAAATCTATGATAACGAAGCCGCAGTAGGTCAGGCGATTGCAGAAAGTGGCGTGCCACGTCATGAACTCTACATCACCACTAAAATCTGGATTGAAAATCTCAGCAAAGACAAATTGATCCCAAGTCTGAAAGAGAGCCTGCAAAAATTGCGTACCGATTATGTTGATCTGACGCTAATCCACTGGCCGTCACCAAACGATGAAGTCTCTGTTGAAGAGTTTATGCAGGCGCTGCTGGAAGCCAAAAAACAAGGGCTGACGCGTGAGATCGGTATTTCCAACTTCACGATCCCGTTGATGGAAAAAGCGATTGCTGCTGTTGGTGCTGAAAACATCGCTACTAACCAGATTGAACTCTCTCCTTATCTGCAAAACCGTAAAGTGGTTGCCTGGGCTAAACAGCACGGCATCCATATTACTTCCTATATGACGCTGGCGTATGGTAAGGCCCTGAAAGATGAGGTTATTGCTCGTATCGCAGCTAAACACAATGCGACTCCGGCACAAGTGATTCTGGCGTGGGCTATGGGGGAAGGTTACTCAGTAATTCCTTCTTCTACTAAACGTAAAAACCTGGAAAGTAATCTTAAGGCACAAAATTTACAGCTTGATGCCGAAGATAAAAAAGCGATCGCCGCACTGGATTGCAACGACCGCCTGGTTAGCCCGGAAGGTCTGGCTCCTGAATGGGATTAA", - "dna_sequence_length": 804, - "functions": [ - "2,5-diketo-D-gluconate reductase B" - ], - "id": "CDS_197", - "location": [ - [ - "NC_000913", - 229167, - "+", - 804 - ] - ], - "md5": "17b239251732e24d58068a689f3b3820", - "parent_gene": "", - "protein_md5": "42d497419a55e8f85fbbf0897fb40734", - "protein_translation": "MAIPAFGLGTFRLKDDVVISSVITALELGYRAIDTAQIYDNEAAVGQAIAESGVPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPNDEVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHGIHITSYMTLAYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTKRKNLESNLKAQNLQLDAEDKKAIAALDCNDRLVSPEGLAPEWD", - "protein_translation_length": 267, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0208" - ], - [ - "gene_synonym", - "GeneID:947507" - ], - [ - "gene_synonym", - "JW0198" - ], - [ - "gene_synonym", - "GI:16128195" - ], - [ - "gene_synonym", - "yafC" - ], - [ - "gene_synonym", - "NP_414744.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30864" - ], - [ - "gene_synonym", - "EcoGene:EG11649" - ], - [ - "gene_synonym", - "ASAP:ABE-0000694" - ], - [ - "gene_synonym", - "b0208" - ] - ], - "dna_sequence": "ATGAAAGCCACGTCGGAAGAACTCGCCATTTTTGTTTCGGTCGTCGAAAGCGGCAGCTTTAGCCGGGCAGCGGAACAATTAGGGCAAGCAAACTCAGCGGTAAGCCGGGCGGTGAAAAAGCTGGAGATGAAACTTGGCGTTAGCCTGCTTAATCGGACCACGCGACAACTTAGCCTGACGGAAGAAGGCGAGCGTTATTTTCGTCGCGTACAGTCAATTTTGCAGGAGATGGCAGCGGCAGAATCAGAAATTATGGAGACGCGTAATACACCGCGTGGACTGTTACGGATCGATGCCGCAACTCCAGTGGTGCTGCACTTTCTGATGCCGTTAATTAAGCCTTTCCGTGAACGCTATCCGGAAGTCACTTTGTCGCTAGTCTCCTCCGAAACGATTATTAATTTGATCGAAAGAAAAGTGGATGTCGCGATACGCGCTGGTACGTTAACGGATTCCAGCTTACGTGCCAGGCCGTTATTTAACAGTTATCGAAAAATTATCGCCTCCCCCGATTATATTTCCCGCTACGGGAAGCCAGAAACGATCGACGATTTAAAGCAACATATTTGCCTGGGATTCACTGAACCCGCTTCCCTCAATACCTGGCCGATAGCCCGTAGCGATGGACAATTACATGAGGTGAAGTACGGTTTGTCATCCAATAGTGGGGAAACACTGAAACAGCTTTGCCTGAGTGGCAACGGGATTGCGTGTTTGTCCGACTACATGATCGACAAAGAAATCGCTCGCGGAGAATTGGTGGAGTTAATGGCAGATAAAGTGTTGCCAGTGGAAATGCCATTCAGTGCCGTCTATTACAGCGACCGTGCGGTAAGTACGCGCATCCGGGCTTTTATCGATTTCCTTAGCGAGCATGTAAAAACAGCTCCCGGAGGAGCTGTCAGAGAGGCTTAA", - "dna_sequence_length": 915, - "functions": [ - "LysR family putative transcriptional regulator" - ], - "id": "CDS_198", - "location": [ - [ - "NC_000913", - 230881, - "-", - 915 - ] - ], - "md5": "a497a86de1c920266157016b35f4242a", - "parent_gene": "", - "protein_md5": "0890b81dcd477ce27b91f0297845e1f0", - "protein_translation": "MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLTEEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATPVVLHFLMPLIKPFRERYPEVTLSLVSSETIINLIERKVDVAIRAGTLTDSSLRARPLFNSYRKIIASPDYISRYGKPETIDDLKQHICLGFTEPASLNTWPIARSDGQLHEVKYGLSSNSGETLKQLCLSGNGIACLSDYMIDKEIARGELVELMADKVLPVEMPFSAVYYSDRAVSTRIRAFIDFLSEHVKTAPGGAVREA", - "protein_translation_length": 304, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0209" - ], - [ - "gene_synonym", - "yafD" - ], - [ - "gene_synonym", - "GI:16128196" - ], - [ - "gene_synonym", - "ASAP:ABE-0000700" - ], - [ - "gene_synonym", - "JW5017" - ], - [ - "gene_synonym", - "EcoGene:EG11650" - ], - [ - "gene_synonym", - "NP_414745.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8U2" - ], - [ - "gene_synonym", - "b0209" - ], - [ - "gene_synonym", - "GeneID:946286" - ] - ], - "dna_sequence": "GTGCGAAAAAACACCTATGCCATGCGCTATGTTGCCGGACAACCTGCGGAAAGGATCTTACCGCCGGGGTCTTTTGCGAGCATCGGCCAGGCATTACCACCTGGGGAACCGTTAAGTACCGAAGAGCGTATTCGGATCCTGGTGTGGAACATATACAAACAGCAACGCGCTGAATGGTTGTCGGTATTAAAGAACTACGGCAAAGATGCACATCTGGTGTTATTGCAGGAAGCGCAGACAACGCCAGAGTTAGTACAGTTTGCGACCGCTAACTATCTTGCCGCCGATCAGGTACCCGCTTTCGTGCTGCCACAACATCCTTCTGGCGTAATGACCCTTTCGGCGGCACATCCAGTGTATTGCTGCCCGTTACGTGAACGAGAACCCATTTTGCGTCTGGCGAAGTCGGCACTGGTGACGGTCTATCCATTACCTGACACCCGCCTGTTGATGGTGGTTAATATACACGCCGTCAACTTCAGTCTGGGCGTGGATGTCTATAGTAAGCAGTTACTTCCTATTGGCGATCAGATAGCTCACCACAGCGGCCCGGTCATTATGGCGGGAGATTTCAATGCCTGGAGCCGTAGAAGGATGAACGCGTTATATCGCTTTGCGCGGGAAATGTCGCTGCGCCAGGTGCGTTTTACCGATGATCAGCGCCGTCGGGCGTTTGGTCGCCCGCTCGATTTTGTTTTCTACCGTGGTCTGAACGTCAGTGAAGCTTCTGTACTGGTTACGCGCGCTTCCGATCACAATCCGCTACTCGTTGAATTCAGTCCCGGCAAGCCTGATAAATAA", - "dna_sequence_length": 801, - "functions": [ - "endo/exonuclease/phosphatase family protein" - ], - "id": "CDS_199", - "location": [ - [ - "NC_000913", - 231122, - "+", - 801 - ] - ], - "md5": "df7a4940ebf617251767c842c3b63738", - "parent_gene": "", - "protein_md5": "12612a887d60eca1ae67919be49d5007", - "protein_translation": "MRKNTYAMRYVAGQPAERILPPGSFASIGQALPPGEPLSTEERIRILVWNIYKQQRAEWLSVLKNYGKDAHLVLLQEAQTTPELVQFATANYLAADQVPAFVLPQHPSGVMTLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNFSLGVDVYSKQLLPIGDQIAHHSGPVIMAGDFNAWSRRRMNALYRFAREMSLRQVRFTDDQRRRAFGRPLDFVFYRGLNVSEASVLVTRASDHNPLLVEFSPGKPDK", - "protein_translation_length": 266, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414746.1" - ], - [ - "gene_synonym", - "GeneID:946197" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30866" - ], - [ - "gene_synonym", - "GI:16128197" - ], - [ - "gene_synonym", - "yafE" - ], - [ - "gene_synonym", - "ECK0210" - ], - [ - "gene_synonym", - "JW0200" - ], - [ - "gene_synonym", - "b0210" - ], - [ - "gene_synonym", - "ASAP:ABE-0000702" - ], - [ - "gene_synonym", - "EcoGene:EG11651" - ] - ], - "dna_sequence": "ATGTCAGGTCTGCCACAGGGCAGACCAACGTTTGGCGCTGCGCAAAACGTGAGCGCGGTGGTGGCGTATGACTTATCTGCCCACATGCTGGATGTCGTGGCACAAGCTGCCGAAGCCCGGCAACTGAAAAATATCACCACCCGCCAGGGATATGCCGAAAGTCTGCCATTTGCCGATAACGCATTTGATATTGTTATCAGCCGTTATTCTGCCCATCACTGGCATGATGTTGGTGCAGCACTGCGAGAAGTGAATAGGATATTGAAACCTGGCGGTAGGCTGATTGTGATGGACGTAATGTCTCCGGGTCACCCAGTGCGCGACATCTGGTTACAGACGGTAGAAGCATTACGCGATACCTCTCACGTACGAAACTACGCCAGCGGTGAGTGGTTGACGTTAATCAATGAAGCCAATCTGATAGTTGATAATTTAATTACAGATAAGTTACCGCTGGAATTTTCTTCATGGGTCGCGAGAATGCGTACGCCAGAAGCGTTAGTAGACGCTATTCGCATTTACCAACAGAGCGCATCGACAGAGGTGAGAACGTATTTTGCCTTGCAGAATGATGGCTTTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAA", - "dna_sequence_length": 624, - "functions": [ - "putative S-adenosyl-L-methionine-dependent methyltransferase" - ], - "id": "CDS_200", - "location": [ - [ - "NC_000913", - 231926, - "+", - 624 - ] - ], - "md5": "bc57be6a327d51261f60c9f97da05d2c", - "parent_gene": "", - "protein_md5": "388cadc258c740e3d963af8bf6f1291d", - "protein_translation": "MSGLPQGRPTFGAAQNVSAVVAYDLSAHMLDVVAQAAEARQLKNITTRQGYAESLPFADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSPGHPVRDIWLQTVEALRDTSHVRNYASGEWLTLINEANLIVDNLITDKLPLEFSSWVARMRTPEALVDAIRIYQQSASTEVRTYFALQNDGFFTSDIIMVDAHKAA", - "protein_translation_length": 207, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5018" - ], - [ - "gene_synonym", - "NP_414747.1" - ], - [ - "gene_synonym", - "GI:16128198" - ], - [ - "gene_synonym", - "yafG" - ], - [ - "gene_synonym", - "ECK0211" - ], - [ - "gene_synonym", - "GeneID:945694" - ], - [ - "gene_synonym", - "ASAP:ABE-0000704" - ], - [ - "gene_synonym", - "EcoGene:EG10246" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEZ7" - ], - [ - "gene_synonym", - "b0211" - ], - [ - "gene_synonym", - "dniR" - ], - [ - "gene_synonym", - "mltD" - ] - ], - "dna_sequence": "ATGAAGGCAAAAGCGATATTACTCGCCTCTGTCCTGCTCGTGGGTTGCCAGAGTACCGGCAACGTTCAACAGCACGCACAGAGCCTTTCTGCAGCTGGTCAAGGGGAAGCAGCAAAGTTTACAAGTCAGGCACGATGGATGGACGATGGGACGTCTATCGCGCCAGATGGTGACTTGTGGGCTTTCATTGGCGACGAGCTAAAGATGGGAATTCCGGAAAATGACCGGATTCGCGAACAGAAACAGAAATATTTACGCAATAAGAGCTATCTCCACGATGTAACTTTACGGGCAGAGCCGTATATGTACTGGATAGCAGGGCAAGTTAAAAAACGTAACATGCCTATGGAACTGGTACTACTACCCATAGTGGAGAGCGCTTTTGATCCTCACGCAACGTCTGGCGCCAATGCCGCAGGCATCTGGCAGATCATTCCGAGCACGGGGCGCAATTATGGTTTGAAACAGACCCGCAATTATGACGCGCGTCGCGATGTTGTTGCTTCAACAACTGCCGCGCTGAATATGATGCAGCGTCTGAACAAAATGTTTGACGGCGACTGGCTTCTGACCGTAGCGGCTTATAACAGCGGCGAAGGTCGGGTCATGAAGGCAATTAAAACGAACAAAGCGCGTGGGAAATCCACGGACTTCTGGTCGTTACCGTTGCCGCAGGAAACGAAGCAGTACGTGCCTAAAATGCTGGCATTGAGTGATATTCTCAAAAACAGCAAGCGTTATGGCGTACGTCTGCCAACGACCGATGAAAGCCGTGCTCTGGCGCGTGTGCACCTGAGCAGCCCGGTTGAAATGGCGAAGGTAGCAGATATGGCGGGGATTTCCGTCAGCAAGCTGAAGACATTCAACGCTGGCGTAAAAGGCTCCACGCTGGGCGCAAGTGGCCCGCAGTACGTGATGGTGCCAAAGAAGCATGCAGATCAACTGCGTGAATCTCTGGCTTCAGGCGAAATTGCTGCTGTACAGTCGACGCTGGTTGCCGACAATACGCCGCTTAACAGCCGTGTTTACACCGTACGCTCTGGCGACACGCTTTCAAGTATCGCTTCACGTCTCGGCGTAAGCACCAAAGATTTGCAGCAGTGGAACAAACTGCGCGGATCTAAGCTGAAGCCAGGCCAAAGTTTGACGATTGGTGCAGGCAGTAGCGCACAGCGACTGGCAAACAACAGCGATAGCATTACGTATCGTGTGCGCAAAGGCGATTCGCTTTCAAGCATTGCTAAACGCCACGGCGTGAACATCAAAGATGTGATGCGCTGGAACAGCGACACTGCGAATCTGCAACCAGGCGATAAGCTGACGTTGTTTGTGAAAAACAACAACATGCCAGATTCCTGA", 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- [ - "gene_synonym", - "ASAP:ABE-0000707" - ], - [ - "gene_synonym", - "NP_414748.1" - ], - [ - "gene_synonym", - "ECK0212" - ], - [ - "gene_synonym", - "b0212" - ], - [ - "gene_synonym", - "EcoGene:EG13330" - ], - [ - "gene_synonym", - "JW0202" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC84" - ], - [ - "gene_synonym", - "yafR" - ] - ], - "dna_sequence": "ATGAATCTTAACAGTATTCCCGCCTTTGATGACAATTACATCTGGGTTTTGAATGATGAAGCAGGTCGCTGCCTGATTGTCGATCCCGGAGACGCAGAGCCAGTATTAAACGCCATTGCCGCCAATAACTGGCAACCGGAGGCCATATTTCTCACCCACCATCACCACGATCACGTTGGCGGCGTAAAAGAACTGGTGGAAAAGTTTCCACAAATTGTGGTGTATGGTCCACAAGAGACACAAGATAAGGGAACAACACAGGTAGTCAAAGATGGCGAAACTGCCTTCGTTTTGGGGCATGAATTTAGTGTAATTGCTACGCCGGGTCACACTTTAGGACATATCTGTTACTTCAGTAAACCTTATCTATTTTGCGGCGACACACTGTTTTCTGGTGGGTGTGGTCGGTTGTTTGAAGGGACAGCATCACAAATGTATCAATCACTTAAAAAGTTAAGTGCGTTACCTGACGATACATTGGTATGTTGTGCTCATGAATATACCTTATCAAATATGAAGTTTGCTTTGAGTATTCTTCCGCACGATTTGTCCATAAATGATTATTATCGTAAAGTTAAGGAGTTACGGGCAAAAAATCAAATAACACTACCCGTAATTCTGAAAAATGAGCGGCAAATTAATGTTTTTTTAAGAACGGAAGATATTGATTTAATTAATGTAATTAATGAAGAAACATTATTGCAACAACCTGAAGAGCGTTTTGCATGGTTAAGGTCAAAGAAAGATAGGTTCTGA", - "dna_sequence_length": 756, - "functions": [ - "hydroxyacylglutathione hydrolase" - ], - "id": "CDS_202", - "location": [ - [ - "NC_000913", - 234782, - "-", - 756 - ] - ], - "md5": "1980b39937e514e3f7efa7c8fee84c7e", - "parent_gene": "", - "protein_md5": "90398da652d9ee65dd85822ddeabcda5", - "protein_translation": "MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINVINEETLLQQPEERFAWLRSKKDRF", - "protein_translation_length": 251, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414749.2" - ], - [ - "gene_synonym", - "GeneID:944903" - ], - [ - "gene_synonym", - "ASAP:ABE-0000713" - ], - [ - "gene_synonym", - "GI:90111099" - ], - [ - "gene_synonym", - "JW0203" - ], - [ - "gene_synonym", - "ECK0213" - ], - [ - "gene_synonym", - "b0213" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75672" - ], - [ - "gene_synonym", - "EcoGene:EG13331" - ], - [ - "gene_synonym", - "yafS" - ] - ], - "dna_sequence": "ATGAAACCGGCAAGAGTCCCTCAAACTGTCGTGGCTCCTGATTGCTGGGGCGATTTGCCCTGGGGAAAGCTTTATCGCAAGGCGCTGGAGCGCCAGCTCAACCCGTGGTTCACTAAAATGTATGGTTTTCATCTGCTTAAGATTGGCAATTTAAGCGCAGAAATCAATTGCGAAGCGTGCGCGGTTTCTCATCAAGTGAATGTTTCTGCGCAAGGAATGCCCGTCCAGGTACAGGCGGACCCACTTCATCTTCCTTTTGCCGATAAATCCGTTGATGTTTGTCTACTGGCACATACATTGCCGTGGTGCACCGATCCGCATCGTTTATTGCGTGAAGCCGATCGGGTATTGATTGATGATGGCTGGCTGGTCATTAGTGGCTTCAATCCCATCAGTTTTATGGGATTACGCAAACTTGTGCCGGTATTGCGCAAAACCTCGCCCTATAACAGCCGGATGTTTACTCTGATGCGGCAGCTGGACTGGCTCTCTTTGTTGAATTTTGAAGTGCTACACGCCAGCCGTTTCCACGTTCTCCCGTGGAACAAACACGGAGGAAAACTATTGAATGCGCATATTCCTGCGCTTGGTTGCTTACAACTTATTGTTGCCCGGAAACGGACTATTCCTTTAACGCTAAATCCGATGAAACAGAGTAAAAACAAGCCACGAATTCGCCAGGCGGTTGGAGCCACCCGGCAATGTCGTAAACCACAGGCTTAA", - "dna_sequence_length": 723, - "functions": [ - "putative S-adenosyl-L-methionine-dependent methyltransferase" - ], - "id": "CDS_203", - "location": [ - [ - "NC_000913", - 234816, - "+", - 723 - ] - ], - "md5": "ae59ceb4288e043c46854cdc2a929cd5", - "parent_gene": "", - "protein_md5": "60afec669214c402822c446e607cb6a8", - "protein_translation": "MKPARVPQTVVAPDCWGDLPWGKLYRKALERQLNPWFTKMYGFHLLKIGNLSAEINCEACAVSHQVNVSAQGMPVQVQADPLHLPFADKSVDVCLLAHTLPWCTDPHRLLREADRVLIDDGWLVISGFNPISFMGLRKLVPVLRKTSPYNSRMFTLMRQLDWLSLLNFEVLHASRFHVLPWNKHGGKLLNAHIPALGCLQLIVARKRTIPLTLNPMKQSKNKPRIRQAVGATRQCRKPQA", - "protein_translation_length": 240, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rnh" - ], - [ - "gene_synonym", - "rnhA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7Y4" - ], - [ - "gene_synonym", - "GI:16128201" - ], - [ - "gene_synonym", - "ECK0214" - ], - [ - "gene_synonym", - "herA" - ], - [ - "gene_synonym", - "EcoGene:EG10860" - ], - [ - "gene_synonym", - "sin" - ], - [ - "gene_synonym", - "b0214" - ], - [ - "gene_synonym", - "cer" - ], - [ - "gene_synonym", - "JW0204" - ], - [ - "gene_synonym", - "NP_414750.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000717" - ], - [ - "gene_synonym", - "sdrA" - ], - [ - "gene_synonym", - "dasF" - ], - [ - "gene_synonym", - "GeneID:946955" - ] - ], - "dna_sequence": "ATGCTTAAACAGGTAGAAATTTTCACCGATGGTTCGTGTCTGGGCAATCCAGGACCTGGGGGTTACGGCGCTATTTTACGCTATCGCGGACGCGAGAAAACCTTTAGCGCTGGCTACACCCGCACCACCAACAACCGTATGGAGTTGATGGCCGCTATTGTCGCGCTGGAGGCGTTAAAAGAACATTGCGAAGTCATTTTGAGTACCGACAGCCAGTATGTCCGCCAGGGTATCACCCAGTGGATCCATAACTGGAAAAAACGTGGCTGGAAAACCGCAGACAAAAAACCAGTAAAAAATGTCGATCTCTGGCAACGTCTTGATGCTGCATTGGGGCAGCATCAAATCAAATGGGAATGGGTTAAAGGCCATGCCGGACACCCGGAAAACGAACGCTGTGATGAACTGGCTCGTGCCGCGGCGATGAATCCCACACTGGAAGATACAGGCTACCAAGTTGAAGTTTAA", - "dna_sequence_length": 468, - "functions": [ - "ribonuclease HI, degrades RNA of DNA-RNA hybrids" - ], - "id": "CDS_204", - "location": [ - [ - "NC_000913", - 236002, - "-", - 468 - ] - ], - "md5": "45b958d1c9b138f117432897564f1890", - "parent_gene": "", - "protein_md5": "baa389b877a7f741a38376cf573ddbda", - "protein_translation": "MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV", - "protein_translation_length": 155, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "dnaQ" - ], - [ - "gene_synonym", - "NP_414751.1" - ], - [ - "gene_synonym", - "mutD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03007" - ], - [ - "gene_synonym", - "ECK0215" - ], - [ - "gene_synonym", - "GeneID:946441" - ], - [ - "gene_synonym", - "ASAP:ABE-0000722" - ], - [ - "gene_synonym", - "JW0205" - ], - [ - "gene_synonym", - "b0215" - ], - [ - "gene_synonym", - "EcoGene:EG10243" - ], - [ - "gene_synonym", - "GI:16128202" - ] - ], - "dna_sequence": "ATGAGCACTGCAATTACACGCCAGATCGTTCTCGATACCGAAACCACCGGTATGAACCAGATTGGTGCGCACTATGAAGGCCACAAGATCATTGAGATTGGTGCCGTTGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCTGGTGGATCCGGAAGCCTTTGGCGTACATGGTATTGCCGATGAATTTTTGCTCGATAAGCCCACGTTTGCCGAAGTAGCCGATGAGTTCATGGACTATATTCGCGGCGCGGAGTTGGTGATCCATAACGCAGCGTTCGATATCGGCTTTATGGACTACGAGTTTTCGTTGCTTAAGCGCGATATTCCGAAGACCAATACTTTCTGTAAGGTCACCGATAGCCTTGCGGTGGCGAGGAAAATGTTTCCCGGTAAGCGCAACAGCCTCGATGCGTTATGTGCTCGCTACGAAATAGATAACAGTAAACGAACGCTGCACGGGGCATTACTCGATGCCCAGATCCTTGCGGAAGTTTATCTGGCGATGACCGGTGGTCAAACGTCGATGGCTTTTGCGATGGAAGGAGAGACACAACAGCAACAAGGTGAAGCAACAATTCAGCGCATTGTACGTCAGGCAAGTAAGTTACGCGTTGTTTTTGCGACAGATGAAGAGATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAA", - "dna_sequence_length": 732, - "functions": [ - "DNA polymerase III epsilon subunit" - ], - "id": "CDS_205", - "location": [ - [ - "NC_000913", - 236067, - "+", - 732 - ] - ], - "md5": "ff9d5f51de261d59ef5d46d2fe3e3ab3", - "parent_gene": "", - "protein_md5": "eb05d01e354a7e3cee855e6993898b71", - "protein_translation": "MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLAMTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFATDEEIAAHEARLDLVQKKGGSCLWRA", - "protein_translation_length": 243, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77339" - ], - [ - "gene_synonym", - "ECK0217" - ], - [ - "gene_synonym", - "JW0206" - ], - [ - "gene_synonym", - "EcoGene:EG13332" - ], - [ - "gene_synonym", - "b0217" - ], - [ - "gene_synonym", - "GeneID:949009" - ], - [ - "gene_synonym", - "ASAP:ABE-0000727" - ], - [ - "gene_synonym", - "yafT" - ], - [ - "gene_synonym", - "GI:16128203" - ], - [ - "gene_synonym", - "NP_414752.1" - ] - ], - "dna_sequence": "ATGAATTCAAAAAAGCTTTGTTGCATATGTGTGTTATTCTCGCTGCTTGCAGGATGTGCCTCTGAATCTTCTATTGATGAAAAGAAGAAAAAAGCTCAAGTCACACAAAGTAATATTAATAAAAACACTCCCCAGCAACTGACAGACAAAGATTTATTCGGTAATGAAACCACTCTGGCCGTATCCGAAGAGGATATTCAAGCTGCGCTTGATGGAGATGAGTTCCGCGTTCCCCTTAATTCTCCTGTAATACTTGTTCAATCCGGCAACCGCGCACCGGAAACCATTATGCAGGAGGAGATGCGAAAATATTATACTGTTTCCACATTCTCTGGTATCCCGGACAGGCAAAAGCCTCTGACTTGTAACAAAAACAAAGATAAAAATGAGAACGAGGATGTTGCCAGTGCTGAGAATATGAACTGGATGCAGGCACTGCGTTTTGTGGCTGCAAAAGGACATCAGAAAGCGATTATTGTTTACCAGGATATGTTGCAGACAGGAAAATATGACTCTGCGCTGAAATCAACAGTATGGTCCGACTATAAAAATGACAAACTCACTGACGCTATCTCCCTGCGCTACCTGGTACGTTTCACGCTGGTGGATGTGGCAACAGGTGAGTGGGCTACCTGGTCGCCGGTGAATTATGAATATAAAGTGCTTCCACCATTGCCCGACAAGAATGAAGCCAGTACGACTGATATGACAGAGCAGCAAATCATGCAACTTAAGCAAAAGACCTATAAAGCGATGGTAAAAGATTTGGTTAACCGCTATCAATAA", - "dna_sequence_length": 786, - "functions": [ - "lipoprotein" - ], - "id": "CDS_206", - "location": [ - [ - "NC_000913", - 237335, - "+", - 786 - ] - ], - "md5": "3d9ce0d1ae120cce97d62fe75254b3ee", - "parent_gene": "", - "protein_md5": "3ea30f2b0baa586562a330dd1e4e03ff", - "protein_translation": "MNSKKLCCICVLFSLLAGCASESSIDEKKKKAQVTQSNINKNTPQQLTDKDLFGNETTLAVSEEDIQAALDGDEFRVPLNSPVILVQSGNRAPETIMQEEMRKYYTVSTFSGIPDRQKPLTCNKNKDKNENEDVASAENMNWMQALRFVAAKGHQKAIIVYQDMLQTGKYDSALKSTVWSDYKNDKLTDAISLRYLVRFTLVDVATGEWATWSPVNYEYKVLPPLPDKNEASTTDMTEQQIMQLKQKTYKAMVKDLVNRYQ", - "protein_translation_length": 261, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4586" - ], - [ - "gene_synonym", - "ECK4397" - ], - [ - "gene_synonym", - "YP_001165307.1" - ], - [ - "gene_synonym", - "EcoGene:EG14451" - ], - [ - "gene_synonym", - "GeneID:5061498" - ], - [ - "gene_synonym", - "ykfM" - ], - [ - "gene_synonym", - "GI:145698220" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:A5A605" - ] - ], - "dna_sequence": "ATGCGTTTACATGTTAAATTAAAAGAGTTTCTTTCGATGTTTTTTATGGCCATATTATTTTTCCCTGCATTCAATGCTTCTTTGTTTTTTACCGGAGTTAAACCTCTATATTCAATAATAAAATGCTCCACGGAAATATTTTATGATTGGAGAATGTTGATTCTGTGCTTCGGTTTCATGTCGTTTTCCTTTTTAAATATTCATGTAATTTTACTTACGATAATAAAATCATTCTTAATCAAAAAAACGAAGGTAGTCAATTTCGCCACAGACATAACAATACAGCTAACTCTTATATTTTTACTAATAGCTATCGTAATAGCACCTTTAATAGCTCCTTTTGTCACAGGATATGTCAATACTAATTATCACCCCTGCGGTAATAATACGGGAATTTTCCCAGGAGCAATCTATATTAAAAATGGCATGAAATGTAATAATGGATATATTTCTCGCAAGGAAGATTCAGCAGTTAAATAA", - "dna_sequence_length": 480, - "functions": [ - "lethality reduction protein, putative inner membrane protein" - ], - "id": "CDS_207", - "location": [ - [ - "NC_000913", - 238736, - "-", - 480 - ] - ], - "md5": "b1e38142e92ff1a65104d3535da96e3d", - "parent_gene": "", - "protein_md5": "203b6e42434430fb1985fedd77b1ef43", - "protein_translation": "MRLHVKLKEFLSMFFMAILFFPAFNASLFFTGVKPLYSIIKCSTEIFYDWRMLILCFGFMSFSFLNIHVILLTIIKSFLIKKTKVVNFATDITIQLTLIFLLIAIVIAPLIAPFVTGYVNTNYHPCGNNTGIFPGAIYIKNGMKCNNGYISRKEDSAVK", - "protein_translation_length": 159, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0218" - ], - [ - "gene_synonym", - "JW0207" - ], - [ - "gene_synonym", - "EcoGene:EG13333" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77354" - ], - [ - "gene_synonym", - "ASAP:ABE-0000729" - ], - [ - "gene_synonym", - "yafU" - ], - [ - "gene_synonym", - "GeneID:946644" - ], - [ - "gene_synonym", - "b0218" - ] - ], - "dna_sequence": "AGAACCATAGAATTTATTATGAGTTCAGAGCGAGATCTGGTTAATTTTCTTGGCGATTTTTCAATGGATGTGGCCAAAGCAGTTATAGCCGGTGGTGTTGCAACCGCTATTGGAAGTCTGGCTTCTTTTGCCTGTGTTAGCTTTGGCTTTCCAGTAATTCTTGTCGGAGGAGCAATTTTACTGACAGGGATAGTGTGTACAGTTGTTTTAAATGAAATCGATGCTCAATGCCATTTATCAGAAAAATTAAAATATGCAATTAGAGATGGACTAAAACGGCAACAGGAACTTGATAAATGGAAAAGGGAAAACATGACTCCATTTATGTATGTTCTTAACACTCCACCCGTGATATGA", - "dna_sequence_length": 357, - "id": "CDS_208", - "location": [ - [ - "NC_000913", - 239102, - "-", - 357 - ] - ], - "md5": "dc18e4bdea5570b30b50c60ed51eff9b", - "parent_gene": "", - "protein_md5": "bfc7e62d65b60d55daf2ab11d66714b7", - "protein_translation": "RTIEFIMSSERDLVNFLGDFSMDVAKAVIAGGVATAIGSLASFACVSFGFPVILVGGAILLTGIVCTVVLNEIDAQCHLSEKLKYAIRDGLKRQQELDKWKRENMTPFMYVLNTPPVI", - "protein_translation_length": 118, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0219" - ], - [ - "gene_synonym", - "JW0208" - ], - [ - "gene_synonym", - "GeneID:1450235" - ], - [ - "gene_synonym", - "yafF" - ], - [ - "gene_synonym", - "EcoGene:EG11772" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q2EEP9" - ], - [ - "gene_synonym", - "b4503" - ], - [ - "gene_synonym", - "ASAP:ABE-0285024" - ] - ], - "dna_sequence": "GATTTAACCGCAGAGAAGTTCGCCACAGCAATCCGAAACCACTGGCACGTGGAGAATAAGCTGCACAGGCGTCTGGACGTGGTAATGAATGAAGACGACTACAAAATAAGAAGAGGAAACGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGAGAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTACCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAG", - "dna_sequence_length": 273, - "id": "CDS_209", - "location": [ - [ - "NC_000913", - 239106, - "+", - 273 - ] - ], - "md5": "752128b4b4bd741f9fcfc8c6160a14dc", - "parent_gene": "", - "protein_md5": "1f290ee34f64f6f4913bfc6a64a30164", - "protein_translation": "DLTAEKFATAIRNHWHVENKLHRRLDVVMNEDDYKIRRGNAAELFSGIRHIAINILTNEKVFKAGLRRKMRKAAMDRNYLASVLAGSGLS", - "protein_translation_length": 90, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0220" - ], - [ - "gene_synonym", - "JW5019" - ], - [ - "gene_synonym", - "NP_414754.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000734" - ], - [ - "gene_synonym", - "EcoGene:EG13334" - ], - [ - "gene_synonym", - "GeneID:946585" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47679" - ], - [ - "gene_synonym", - "yafV" - ], - [ - "gene_synonym", - "GI:16128205" - ], - [ - "gene_synonym", - "b0219" - ] - ], - "dna_sequence": "GTGCCTGGTTTGAAGATTACGCTTTTGCAGCAACCACTGGTGTGGATGGATGGTCCTGCCAACCTGCGTCATTTTGATCGTCAACTGGAAGGTATTACCGGGCGCGATGTGATCGTTCTACCGGAGATGTTTACCAGCGGCTTTGCCATGGAAGCGGCAGCTTCGTCGCTAGCACAAGATGACGTAGTGAACTGGATGACAGCTAAGGCGCAGCAGTGCAATGCGCTGATTGCAGGCAGTGTTGCATTACAAACGGAGTCTGGTTCGGTTAACCGCTTTTTGCTGGTTGAGCCGGGCGGCACGGTACATTTTTATGATAAGCGTCATCTGTTCCGCATGGCAGATGAGCATCTACATTATAAAGCGGGCAATGCGCGAGTGATTGTGGAATGGCGCGGCTGGCGTATTTTGCCGCTGGTGTGCTACGACTTACGTTTTCCTGTGTGGTCGCGCAATCTCAACGATTATGACCTCGCCCTGTACGTCGCCAACTGGCCTGCTCCGCGCTCTCTGCACTGGCAGGCATTGCTGACGGCCCGCGCGATTGAGAATCAGGCGTATGTGGCGGGATGCAATCGCGTCGGCAGCGATGGCAACGGCTGCCATTATCGCGGTGACAGCCGGGTGATTAATCCGCAAGGAGAGATTATCGCTACTGCCGACGCGCATCAGGCAACGCGCATTGATGCGGAGCTGTCGATGGCAGCATTGCGGGAATATAGAGAAAAGTTTCCGGCATGGCAGGATGCGGATGAGTTTAGGTTGTGGTGA", - "dna_sequence_length": 771, - "functions": [ - "putative NAD(P)-binding C-N hydrolase family amidase" - ], - "id": "CDS_210", - "location": [ - [ - "NC_000913", - 240189, - "-", - 771 - ] - ], - "md5": "8ef51094ff6dc7d62af26650f2a9dea7", - "parent_gene": "", - "protein_md5": "00c5bde862cbecf6b9e06caaadfb0975", - "protein_translation": "MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAALREYREKFPAWQDADEFRLW", - "protein_translation_length": 256, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0221" - ], - [ - "gene_synonym", - "GeneID:946530" - ], - [ - "gene_synonym", - "NP_414755.1" - ], - [ - "gene_synonym", - "b0220" - ], - [ - "gene_synonym", - "JW0210" - ], - [ - "gene_synonym", - "ykfE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD59" - ], - [ - "gene_synonym", - "ASAP:ABE-0000740" - ], - [ - "gene_synonym", - "GI:16128206" - ], - [ - "gene_synonym", - "EcoGene:EG13547" - ], - [ - "gene_synonym", - "ivy" - ] - ], - "dna_sequence": "ATGGGCAGGATAAGCTCGGGAGGAATGATGTTTAAGGCAATAACGACAGTCGCCGCTCTGGTCATCGCCACCAGTGCAATGGCGCAGGATGATTTAACCATTAGCAGCCTTGCAAAGGGCGAAACCACCAAAGCTGCATTTAATCAGATGGTACAAGGGCATAAGCTGCCTGCCTGGGTGATGAAAGGCGGTACTTATACTCCCGCACAAACCGTAACGTTGGGAGATGAGACGTATCAGGTGATGAGCGCGTGCAAACCGCATGACTGTGGCTCGCAACGTATCGCTGTGATGTGGTCCGAGAAATCTAATCAGATGACGGGGCTGTTCTCGACTATTGATGAGAAAACGTCGCAAGAGAAACTCACCTGGCTGAATGTGAACGATGCGCTTTCGATTGATGGTAAAACGGTGTTGTTCGCGGCGTTGACCGGCAGCCTGGAAAACCATCCGGATGGCTTTAATTTTAAATAA", - "dna_sequence_length": 474, - "functions": [ - "inhibitor of c-type lysozyme, periplasmic" - ], - "id": "CDS_211", - "location": [ - [ - "NC_000913", - 240343, - "+", - 474 - ] - ], - "md5": "9a1f381c090df96373e34e3aee6bcbf1", - "parent_gene": "", - "protein_md5": "238b3de0b3c2ef07111adecfc93154ab", - "protein_translation": "MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTKAAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK", - "protein_translation_length": 157, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5020" - ], - [ - "gene_synonym", - "yafH" - ], - [ - "gene_synonym", - "GI:90111100" - ], - [ - "gene_synonym", - "ECK0222" - ], - [ - "gene_synonym", - "EcoGene:EG13145" - ], - [ - "gene_synonym", - "b0221" - ], - [ - "gene_synonym", - "ASAP:ABE-0000743" - ], - [ - "gene_synonym", - "fadF" - ], - [ - "gene_synonym", - "fadE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47146" - ], - [ - "gene_synonym", - "GeneID:949007" - ], - [ - "gene_synonym", - "NP_414756.2" - ] - ], - "dna_sequence": "ATGATGATTTTGAGTATTCTCGCTACGGTTGTCCTGCTCGGCGCGTTGTTCTATCACCGCGTGAGCTTATTTATCAGCAGTCTGATTTTGCTCGCCTGGACAGCCGCCCTCGGCGTTGCTGGTCTGTGGTCGGCGTGGGTACTGGTGCCTCTGGCCATTATCCTCGTGCCATTTAACTTTGCGCCTATGCGTAAGTCGATGATTTCCGCGCCGGTATTTCGCGGTTTCCGTAAGGTGATGCCGCCGATGTCGCGCACTGAGAAAGAAGCGATTGATGCGGGCACCACCTGGTGGGAGGGCGACTTGTTCCAGGGCAAGCCGGACTGGAAAAAGCTGCATAACTATCCGCAGCCGCGCCTGACCGCCGAAGAGCAAGCGTTTCTCGACGGCCCGGTAGAAGAAGCCTGCCGGATGGCGAATGATTTCCAGATCACCCATGAGCTGGCGGATCTGCCGCCGGAGTTGTGGGCGTACCTTAAAGAGCATCGTTTCTTCGCGATGATCATCAAAAAAGAGTACGGCGGGCTGGAGTTCTCGGCTTATGCCCAGTCTCGCGTGCTGCAAAAACTCTCCGGCGTGAGCGGGATCCTGGCGATTACCGTCGGCGTGCCAAACTCATTAGGCCCGGGCGAACTGTTGCAACATTACGGCACTGACGAGCAGAAAGATCACTATCTGCCGCGTCTGGCGCGTGGTCAGGAGATCCCCTGCTTTGCACTGACCAGCCCGGAAGCGGGTTCCGATGCGGGCGCGATTCCGGACACCGGGATTGTCTGCATGGGCGAATGGCAGGGCCAGCAGGTGCTGGGGATGCGTCTGACCTGGAACAAACGCTACATTACGCTGGCACCGATTGCGACCGTGCTTGGGCTGGCGTTTAAACTCTCCGACCCGGAAAAATTACTCGGCGGTGCAGAAGATTTAGGCATTACCTGTGCGCTGATCCCAACCACCACGCCGGGCGTGGAAATTGGTCGTCGCCACTTCCCGCTGAACGTACCGTTCCAGAACGGACCGACGCGCGGTAAAGATGTCTTCGTGCCGATCGATTACATCATCGGCGGGCCGAAAATGGCCGGGCAAGGCTGGCGGATGCTGGTGGAGTGCCTCTCGGTAGGCCGCGGCATCACCCTGCCTTCCAACTCAACCGGCGGCGTGAAATCGGTAGCGCTGGCAACCGGCGCGTATGCTCACATTCGCCGTCAGTTCAAAATCTCTATTGGTAAGATGGAAGGGATTGAAGAGCCGCTGGCGCGTATTGCCGGTAATGCCTACGTGATGGATGCTGCGGCATCGCTGATTACCTACGGCATTATGCTCGGCGAAAAACCTGCCGTGCTGTCGGCTATCGTTAAGTATCACTGTACCCACCGCGGGCAGCAGTCGATTATTGATGCGATGGATATTACCGGCGGTAAAGGCATTATGCTCGGGCAAAGCAACTTCCTGGCGCGTGCTTACCAGGGCGCACCGATTGCCATCACCGTTGAAGGGGCTAACATTCTGACCCGCAGCATGATGATCTTCGGACAAGGAGCGATTCGTTGCCATCCGTACGTGCTGGAAGAGATGGAAGCGGCGAAGAACAATGACGTCAACGCGTTCGATAAACTGTTGTTCAAACATATCGGTCACGTCGGTAGCAACAAAGTTCGCAGCTTCTGGCTGGGCCTGACGCGCGGTTTAACCAGCAGCACGCCAACCGGCGATGCCACTAAACGCTACTATCAGCACCTGAACCGCCTGAGCGCCAACCTCGCCCTGCTTTCTGATGTCTCGATGGCAGTGCTGGGCGGCAGCCTGAAACGTCGCGAGCGCATCTCGGCCCGTCTGGGGGATATTTTAAGCCAGCTCTACCTCGCCTCTGCCGTGCTGAAGCGTTATGACGACGAAGGCCGTAATGAAGCCGACCTGCCGCTGGTGCACTGGGGCGTACAAGATGCGCTGTATCAGGCTGAACAGGCGATGGATGATTTACTGCAAAACTTCCCGAACCGCGTGGTTGCCGGGCTGCTGAATGTGGTGATCTTCCCGACCGGACGTCATTATCTGGCACCTTCTGACAAGCTGGATCATAAAGTGGCGAAGATTTTACAAGTGCCGAACGCCACCCGTTCCCGCATTGGTCGCGGTCAGTACCTGACGCCGAGCGAGCATAATCCGGTTGGCTTGCTGGAAGAGGCGCTGGTGGATGTGATTGCCGCCGACCCAATTCATCAGCGGATCTGTAAAGAGCTGGGTAAAAACCTGCCGTTTACCCGTCTGGATGAACTGGCGCACAACGCGCTGGTGAAGGGGCTGATTGATAAAGATGAAGCCGCTATTCTGGTGAAAGCTGAAGAAAGCCGTCTGCGCAGTATTAACGTTGATGACTTTGATCCGGAAGAGCTGGCGACGAAGCCGGTAAAGTTGCCGGAGAAAGTGCGGAAAGTTGAAGCCGCGTAA", 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"MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWSAWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKDHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVPFQNGPTRGKDVFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITVEGANILTRSMMIFGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSSTPTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLASAVLKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLLQNFPNRVVAGLLNVVIFPTGRHYLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHNPVGLLEEALVDVIAADPIHQRICKELGKNLPFTRLDELAHNALVKGLIDKDEAAILVKAEESRLRSINVDDFDPEELATKPVKLPEKVRKVEAA", - "protein_translation_length": 814, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13146" - ], - [ - "gene_synonym", - "ECK0223" - ], - [ - "gene_synonym", - "gmhA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63224" - ], - [ - "gene_synonym", - "tfrA" - ], - [ - "gene_synonym", - "GeneID:949134" - ], - [ - "gene_synonym", - "JW0212" - ], - [ - "gene_synonym", - "ASAP:ABE-0000751" - ], - [ - "gene_synonym", - "b0222" - ], - [ - "gene_synonym", - "NP_414757.1" - ], - [ - "gene_synonym", - "isn" - ], - [ - "gene_synonym", - "GI:16128208" - ], - [ - "gene_synonym", - "lpcA" - ], - [ - "gene_synonym", - "yafI" - ] - ], - "dna_sequence": "ATGTACCAGGATCTTATTCGTAACGAACTGAACGAAGCGGCGGAAACGCTGGCTAACTTTTTAAAAGATGACGCCAATATTCACGCCATTCAGCGCGCGGCGGTCCTGTTAGCAGACAGCTTTAAAGCCGGTGGCAAAGTGCTTTCCTGCGGCAACGGCGGTTCCCATTGCGACGCTATGCACTTTGCCGAAGAGTTGACCGGTCGCTACCGTGAAAACCGTCCGGGCTACCCGGCGATTGCTATTTCTGACGTTAGTCATATTTCCTGCGTCGGTAATGATTTCGGTTTCAATGATATTTTCTCCCGCTACGTTGAAGCGGTAGGTCGCGAAGGCGATGTACTGCTGGGGATCTCCACCTCCGGTAACTCTGCAAACGTGATCAAAGCGATCGCAGCGGCGCGTGAGAAGGGAATGAAAGTGATCACCCTGACCGGTAAAGACGGCGGCAAAATGGCTGGCACGGCGGATATCGAAATTCGCGTACCGCACTTTGGTTATGCCGACCGCATTCAGGAGATTCACATTAAAGTGATCCATATCCTGATCCAGTTGATTGAAAAAGAGATGGTTAAGTAA", - "dna_sequence_length": 579, - "functions": [ - "D-sedoheptulose 7-phosphate isomerase" - ], - "id": "CDS_213", - "location": [ - [ - "NC_000913", - 243543, - "+", - 579 - ] - ], - "md5": "45523881137225e7f624f03892d124b2", - "parent_gene": "", - "protein_md5": "327c877d6f5c7e3c5044d7e2ffeb1d4e", - "protein_translation": "MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK", - "protein_translation_length": 192, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414758.1" - ], - [ - "gene_synonym", - "ECK0224" - ], - [ - "gene_synonym", - "yafJ" - ], - [ - "gene_synonym", - "JW0213" - ], - [ - "gene_synonym", - "EcoGene:EG13147" - ], - [ - "gene_synonym", - "b0223" - ], - [ - "gene_synonym", - "ASAP:ABE-0000755" - ], - [ - "gene_synonym", - "GI:16128209" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47147" - ], - [ - "gene_synonym", - "GeneID:944906" - ] - ], - "dna_sequence": "ATGTGCGAATTGCTCGGGATGAGCGCCAACGTCCCTACCGATATCTGCTTTAGTTTCACCGGGCTTGTACAGCGTGGTGGTGGAACCGGGCCACATAAAGATGGCTGGGGCATTACCTTTTACGAAGGTAAAGGCTGTCGCACATTTAAAGATCCACAACCCAGCTTTAATTCCCCCATCGCCAAACTTGTCCAGGACTACCCGATAAAATCCTGTTCGGTGGTGGCTCATATTCGCCAGGCTAATCGGGGCGAGGTGGCGCTGGAAAATACTCACCCATTTACCCGCGAGTTATGGGGGCGTAACTGGACTTATGCCCATAACGGACAACTGACGGGCTACAAATCACTGGAAACCGGCAACTTCCGCCCGGTAGGCGAAACCGACAGCGAAAAAGCCTTCTGCTGGCTCCTGCATAAATTAACGCAGCGTTACCCGCGCACACCGGGCAACATGGCGGCGGTATTTAAATATATCGCCTCACTGGCGGATGAACTGCGGCAGAAGGGCGTTTTCAACATGCTGCTTTCGGACGGGCGCTATGTAATGGCGTATTGCTCGACTAATTTACACTGGATCACCCGCCGCGCGCCGTTTGGCGTGGCAACGTTGCTGGATCAGGATGTGGAAATCGACTTCAGCTCGCAGACCACACCGAATGATGTGGTCACGGTGATTGCAACACAGCCGCTGACGGGCAATGAAACCTGGCAAAAGATTATGCCAGGCGAATGGCGCTTATTTTGCCTCGGGGAGCGTGTAGTTTGA", - "dna_sequence_length": 768, - "functions": [ - "type 2 glutamine amidotransferase family protein" - ], - "id": "CDS_214", - "location": [ - [ - "NC_000913", - 244327, - "+", - 768 - ] - ], - "md5": "ecde80afa0d465834240ac3ba74aa649", - "parent_gene": "", - "protein_md5": "5b3a74c3ccac39b6b6ad2d79e078b3be", - "protein_translation": "MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRNWTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIASLADELRQKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTTPNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV", - "protein_translation_length": 255, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13148" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA99" - ], - [ - "gene_synonym", - "ECK0225" - ], - [ - "gene_synonym", - "yafK" - ], - [ - "gene_synonym", - "JW0214" - ], - [ - "gene_synonym", - "ASAP:ABE-0000757" - ], - [ - "gene_synonym", - "b0224" - ], - [ - "gene_synonym", - "GI:16128210" - ], - [ - "gene_synonym", - "NP_414759.1" - ], - [ - "gene_synonym", - "GeneID:944910" - ] - ], - "dna_sequence": "ATGCGTAAAATCGCATTAATTCTTGCGATGTTGTTGATCCCGTGCGTTTCATTTGCCGGTTTGCTGGGCAGCAGTAGCTCTACCACGCCTGTGAGCAAAGAGTATAAGCAGCAGTTGATGGGATCCCCTGTCTACATCCAGATCTTCAAGGAAGAACGTACGCTCGATCTCTACGTCAAAATGGGCGAGCAATATCAACTGCTCGACAGCTATAAAATCTGTAAATATTCCGGCGGCTTAGGGCCAAAACAGCGTCAGGGCGATTTCAAAAGCCCGGAAGGGTTTTATAGCGTCCAGCGTAATCAGTTAAAACCAGACAGCCGTTACTACAAAGCGATTAATATTGGTTTCCCCAATGCCTATGACCGTGCGCATGGTTATGAAGGGAAATACCTGATGATCCACGGCGATTGTGTTTCCATCGGCTGCTACGCAATGACCAATCAGGGTATTGATGAGATATTCCAGTTCGTTACTGGTGCGCTGGTGTTTGGTCAGCCGAGCGTGCAAGTGAGTATTTACCCGTTCCGCATGACCGACGCCAATATGAAGCGCCATAAATATTCCAACTTTAAGGACTTCTGGGAGCAACTGAAGCCGGGTTACGACTACTTTGAGCAAACCCGTAAGCCACCAACCGTTTCTGTGGTCAATGGTCGTTACGTGGTCAGCAAGCCGTTAAGCCACGAAGTTGTGCAGCCACAACTGGCATCAAACTACACGCTCCCCGAGGCAAAATAA", - "dna_sequence_length": 741, - "functions": [ - "L,D-transpeptidase-related protein" - ], - "id": "CDS_215", - "location": [ - [ - "NC_000913", - 245805, - "-", - 741 - ] - ], - "md5": "c8dcd31961920082284f94479bde45b5", - "parent_gene": "", - "protein_md5": "99472ffcb58487c5aaf42e057c101ab1", - "protein_translation": "MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLSHEVVQPQLASNYTLPEAK", - "protein_translation_length": 246, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944911" - ], - [ - "gene_synonym", - "ECK0226" - ], - [ - "gene_synonym", - "JW0215" - ], - [ - "gene_synonym", - "NP_414760.1" - ], - [ - "gene_synonym", - "yafQ" - ], - [ - "gene_synonym", - "b0225" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47149" - ], - [ - "gene_synonym", - "EcoGene:EG13154" - ], - [ - "gene_synonym", - "ASAP:ABE-0000761" - ], - [ - "gene_synonym", - "GI:16128211" - ] - ], - "dna_sequence": "ATGATTCAAAGGGATATTGAATACTCGGGACAATATTCAAAGGATGTAAAACTTGCACAAAAGCGTCATAAGGATATGAATAAATTGAAATATCTTATGACGCTTCTTATCAATAATACTTTACCGCTTCCAGCTGTTTATAAAGACCACCCGCTGCAAGGTTCATGGAAAGGTTATCGCGATGCTCATGTCGAACCGGACTGGATCCTGATTTACAAACTTACCGATAAACTTTTACGATTTGAGAGAACTGGAACTCACGCGGCGCTCTTTGGGTAA", - "dna_sequence_length": 279, - "functions": [ - "mRNA interferase toxin of toxin-antitoxin pair YafQ/DinJ" - ], - "id": "CDS_216", - "location": [ - [ - "NC_000913", - 246239, - "-", - 279 - ] - ], - "md5": "f6d21fdd54b9ee93bc348110c23aad9a", - "parent_gene": "", - "protein_md5": "a4fdd8c0939bdd567d3feb8ccc8b86db", - "protein_translation": "MIQRDIEYSGQYSKDVKLAQKRHKDMNKLKYLMTLLINNTLPLPAVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDKLLRFERTGTHAALFG", - "protein_translation_length": 92, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414761.1" - ], - [ - "gene_synonym", - "ECK0227" - ], - [ - "gene_synonym", - "JW0216" - ], - [ - "gene_synonym", - "EcoGene:EG13142" - ], - [ - "gene_synonym", - "dinJ" - ], - [ - "gene_synonym", - "GeneID:944914" - ], - [ - "gene_synonym", - "b0226" - ], - [ - "gene_synonym", - "sosA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47150" - ], - [ - "gene_synonym", - "ASAP:ABE-0000764" - ], - [ - "gene_synonym", - "GI:16128212" - ] - ], - "dna_sequence": "ATGGCTGCTAACGCGTTTGTTCGCGCCCGAATCGATGAAGATCTGAAGAATCAGGCAGCGGACGTACTGGCCGGGATGGGGCTGACCATCTCTGACCTGGTTCGCATAACCCTCACAAAGGTCGCGCGTGAAAAGGCATTGCCGTTTGATTTACGCGAGCCTAATCAATTAACCATTCAATCAATCAAAAACAGCGAAGCTGGCATTGATGTTCATAAGGCCAAAGACGCCGATGATTTATTTGATAAATTAGGAATTTAA", - "dna_sequence_length": 261, - "functions": [ - "antitoxin of YafQ-DinJ toxin-antitoxin system" - ], - "id": "CDS_217", - "location": [ - [ - "NC_000913", - 246502, - "-", - 261 - ] - ], - "md5": "4c9bd396db89f3f1a6060c8f913ee4be", - "parent_gene": "", - "protein_md5": "8ed30fa024c83ac35ce6b448a8331891", - "protein_translation": "MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVAREKALPFDLREPNQLTIQSIKNSEAGIDVHKAKDADDLFDKLGI", - "protein_translation_length": 86, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yafL" - ], - [ - "gene_synonym", - "EcoGene:EG13149" - ], - [ - "gene_synonym", - "ECK0228" - ], - [ - "gene_synonym", - "JW0217" - ], - [ - "gene_synonym", - "b0227" - ], - [ - "gene_synonym", - "GeneID:944899" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47151" - ], - [ - "gene_synonym", - "NP_414762.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000775" - ], - [ - "gene_synonym", - "GI:16128213" - ] - ], - "dna_sequence": "ATGTCCTTGCCGTCGATTCCATCCTTTGTATTGTCGGGATTACTGTTGATTTGTTTGCCGTTTTCTTCATTTGCCAGCGCCACCACATCACATATCTCTTTCAGCTACGCCGCCCGCCAGCGGATGCAAAACCGTGCGCGTTTATTAAAACAGTACCAAACTCATCTGAAAAAGCAGGCCAGCTATATTGTGGAAGGCAATGCCGAAAGCAAAAGGGCGCTACGCCAGCACAACCGGGAGCAGATAAAACAGCATCCAGAATGGTTTCCTGCTCCGCTCAAGGCGAGTGACAGACGCTGGCAGGCGCTGGCGGAAAACAACCACTTTTTAAGCAGCGACCATCTGCATAACATTACCGAAGTGGCGATTCACCGCCTGGAGCAGCAGCTTGGCAAGCCTTACGTCTGGGGCGGTACGCGGCCTGATAAAGGCTTTGACTGTAGCGGGTTGGTTTTTTATGCCTACAACAAGATCCTTGAGGCTAAGCTCCCGCGCACGGCCAATGAGATGTACCACTATCGCCGGGCAACGATTGTGGCGAACAACGACCTGCGCCGGGGAGATTTGCTGTTTTTCCATATCCACAGCCGCGAGATAGCCGATCATATGGGCGTGTATTTGGGCGATGGGCAATTTATCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAG", - "dna_sequence_length": 750, - "functions": [ - "putative lipoprotein and C40 family peptidase" - ], - "id": "CDS_218", - "location": [ - [ - "NC_000913", - 246712, - "+", - 750 - ] - ], - "md5": "d8acd042b978e85335d5a7a7fa5e0172", - "parent_gene": "", - "protein_md5": "d3101b7952ca74c6256e50fa5a6d9bcf", - "protein_translation": "MSLPSIPSFVLSGLLLICLPFSSFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESKRALRQHNREQIKQHPEWFPAPLKASDRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDKGFDCSGLVFYAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGETIRISRLAEPFWQDHFLGARRILTEETIL", - "protein_translation_length": 249, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47152" - ], - [ - "gene_synonym", - "yafM" - ], - [ - "gene_synonym", - "b0228" - ], - [ - "gene_synonym", - "rayT" - ], - [ - "gene_synonym", - "JW0218" - ], - [ - "gene_synonym", - "ECK0229" - ], - [ - "gene_synonym", - "EcoGene:EG13150" - ], - [ - "gene_synonym", - "NP_414763.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000779" - ], - [ - "gene_synonym", - "GeneID:944913" - ], - [ - "gene_synonym", - "GI:16128214" - ], - [ - "gene_synonym", - "tnpAREP" - ] - ], - "dna_sequence": "ATGTCTGAATATCGTCGTTATTACATCAAGGGGGGAACATGGTTTTTCACGGTGAATTTACGAAATCGTCGAAGCCAACTTTTGACCACCCAGTACCAGATGCTCCGTCACGCCATTATTAAAGTTAAGCGAGACAGGCCTTTTGAAATCAACGCCTGGGTCGTTTTGCCAGAGCATATGCACTGTATCTGGACATTACCTGAAGGCGATGATGATTTTTCCTCGCGCTGGCGGGAAATTAAAAAGCAATTTACCCATGCTTGTGGATTGAAAAATATCTGGCAACCACGTTTTTGGGAGCACGCCATCCGCAATACCAAAGATTATAGGCATCATGTTGATTATATTTATATAAATCCAGTAAAGCATGGTTGGGTAAAGCAAGTGAGTGATTGGCCATTCTCAACGTTCCATCGCGATGTCGCGCGAGGGTTATATCCCATCGATTGGGCGGGGGACGTAACGGATTTTAGTGCCGGGGAGCGTATCATTTCATAA", - "dna_sequence_length": 498, - "functions": [ - "RAYT REP element-mobilizing transposase", - "TnpA(REP)" - ], - "id": "CDS_219", - "location": [ - [ - "NC_000913", - 247637, - "+", - 498 - ] - ], - "md5": "ef033fb6403a725c27e816f43c76f338", - "parent_gene": "", - "protein_md5": "a7dd34640dfd0c50d302f2c4aebba93f", - "protein_translation": "MSEYRRYYIKGGTWFFTVNLRNRRSQLLTTQYQMLRHAIIKVKRDRPFEINAWVVLPEHMHCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHAIRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVARGLYPIDWAGDVTDFSAGERIIS", - "protein_translation_length": 165, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944908" - ], - [ - "gene_synonym", - "JW5811" - ], - [ - "gene_synonym", - "ECK0230" - ], - [ - "gene_synonym", - "EcoGene:EG13144" - ], - [ - "gene_synonym", - "lfhA" - ], - [ - "gene_synonym", - "fhiA" - ], - [ - "gene_synonym", - "ASAP:ABE-0000782" - ], - [ - "gene_synonym", - "b0229" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47153" - ] - ], - "dna_sequence": "CTGTTGACAATCAACTTTATTGTCGTCACCAAAGGGGCCGAGCGTATTTCCGAGGTTTCTGCCCGCTTTACCTTAGACGCGATGCCCGGCAAACAGATGGCGATTGACGCCGATCTTAACGCCGGATTGATCAACCAGGCGCAGGCGCAAACCCGGCGTAAAGATGTTGCCAGCGAGGCCGATTTCTACGGCGCGATGGACGGGGCATCGAAGTTTGTGCGCGGGGACGCCATCGCCGGGATGATGATTCTGGCGATCAACCTGATCGGCGGCGTCTGTATCGGGATCTTCAAATACAACCTGAGCGCCGATGCTGCCTTCCAGCAGTATGTGCTGATGACCATCGGCGACGGCCTGGTGGCGCAGATCCCTTCCCTGCTGCTCTCCACCGCGGCGGCGATTATCGTCACCCGCGTCAGCGACAACGGCGATATCGCCCATGACGTGCGTAACCAGCTGCTGGCAAGCCCGTCGGTGCTCTACACCGCCACCGGGATTATGTTCGTGCTGGCGGTGGTACCGGGAATGCCGCACCTGCCGTTTTTGCTGTTCAGCGCCCTGCTTGGTTTTACCGGCTGGCGGATGAGCAAACAGCCGCTGGCGGCGGAGGCGGAAGAGAAAAGCCTCGAAACGCTGACCCGCACCATCACCGAAACCAGCGAGCAGCAGGTCAGTTGGGAAACCATTCCGCTGATCGAGCCTATCAGTTTAAGCCTCGGTTACAAACTGGTGGCGCTGGTGGACAAAGCACAGGGTAACCCGCTCACCCAGCGGATTCGCGGCGTGCGGCAGGTGATTTCTGACGGCAACGGCGTGCTGCTGCCGGAGATCCGCATTCGGGAAAACTTCCGCCTTAAGCCCAGTCAGTACGCCATTTTCATCAACGGCATAAAGGCTGATGAAGCGGATATTCCGGCGGATAAACTGATGGCCCTGCCCTCCAGCGAAACCTACGGCGAGATTGACGGCGTGCAGGGGAACGACCCGGCGTACGGGATGCCGGTCACCTGGATCCAGGCGGCGCAGAAAGCGAAGGCGCTGAATATGGGGTATCAGGTGATCGACAGCGCCAGCGTGATCGCTACCCATGTAAATAAGATTGTGCGCAGCTATATTCCTGATTTGTTTAACTATGATGATATTACGCAGTTGCATAACCGTTTATCGTCGACGGCACCGCGTCTGGCGGAAGATTTGAGCGCGGCGCTCAATTACAGCCAGTTGCTGAAAGTGTACCGGGCGCTGCTGACCGAAGGCGTTTCCCTGCGCGATATCGTCACCATCGCCACCGTGCTGGTCGCCAGTAGCACGGTGACGAAAGATCATATTCTGCTGGCGGCCGATGTGCGCCTGGCATTGCGGCGCAGCATTACCCATCCGTTCGTTCGCAAGCAGGAGCTGACGGTGTATACGCTGAATAATGAGCTGGAAAATCTGCTGACCAACGTGGTGAATCAGGCGCAACAGGGCGGGAAAGTGATGCTCGACAGCGTGCCGGTCGATCCGAATATGCTCAACCAGTTCCAGAGTACGATGCCACAGGTGAAAGAGCAGATGAAAGCGGCGGGGAAAGACCCGGTGCTGCTGGTGCCACCGCAGCTGCGCCCTTTGCTGGCGCGTTATGCAAGGTTGTTTGCGCCGGGGCTGCATGTGCTGTCGTATAACGAAGTGCCGGATGAGCTGGAGTTGAAGATTATGGGGGCGTTGATGTAA", - "dna_sequence_length": 1713, - "id": "CDS_220", - "location": [ - [ - "NC_000913", - 250070, - "-", - 1713 - ] - ], - "md5": "2e124ac77b6c438f3796fa1ac8b03376", - "parent_gene": "", - "protein_md5": "73a3cb1df1043dd763cd7f151bfe378a", - "protein_translation": "LLTINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRNQLLASPSVLYTATGIMFVLAVVPGMPHLPFLLFSALLGFTGWRMSKQPLAAEAEEKSLETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVQGNDPAYGMPVTWIQAAQKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLSSTAPRLAEDLSAALNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSTVTKDHILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNVVNQAQQGGKVMLDSVPVDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRPLLARYARLFAPGLHVLSYNEVPDELELKIMGALM", - "protein_translation_length": 570, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5812" - ], - [ - "gene_synonym", - "ECK0231" - ], - [ - "gene_synonym", - "GeneID:944921" - ], - [ - "gene_synonym", - "lafU" - ], - [ - "gene_synonym", - "EcoGene:EG13143" - ], - [ - "gene_synonym", - "mbhA" - ], - [ - "gene_synonym", - "ASAP:ABE-0000785" - ], - [ - "gene_synonym", - "b0230" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47154" - ] - ], - "dna_sequence": "GTCAGTAAATCCGAGCGTGAAAGCATTATCGCCGCGCTGCACGGGCAGTCGATTTTTAACGGTGGTGGGCTGTCGCCGTTAAATAAAATCAGCCCGTCTCATCCGCCAAAACCTGCCACCGTGGCGGTGCCGGAAGAGACGGAGAAAAAAGCGCGTGATGTGAATGAGAAAACGGCGCTGCTGAAGAAGAAATCCGCCACCGAGCTTGGTGAGCTGGCAACCAGTATCAACACCATTGCCCGTGATGCGCATATGGAAGCGAATCTGGAGATGGAGATTGTTCCCCAGGGATTACGCGTGCTGATTAAAGACGACCAGAACCGCAATATGTTTGAACGCGGCAGCGCGAAGATTATGCCGTTCTTTAAAACGCTGCTGGTGGAGCTCGCGCCAGTGTTCGACTCGCTCGATAATAAAATTATTATTACCGGGCATACCGATGCGATGGCCTACAAAAACAATATCTACAACAACTGGAACCTTTCGGGTGACCGCGCGCTTTCGGCTCGTCGGGTGCTGGAAGAGGCCGGAATGCCGGAAGATAAAGTGATGCAGGTAAGCGCAATGGCGGACCAGATGCTGCTGGATTCCAAAAATCCGCAAAGCGCGGGCAACCGGCGCATTGAGATTATGGTGCTGACCAAAAGTGCGTCCGATACGCTGTATCAATACTTTGGTCAGCATGGGGATAAAGTGGTGCAGCCGCTGGTGCAAAAGCTGGATAAGCAGCAGGTGCTTTCGCAGCGAACGCGTTAA", - "dna_sequence_length": 756, - "id": "CDS_221", - "location": [ - [ - "NC_000913", - 250072, - "+", - 756 - ] - ], - "md5": "58700e6c24724d5221f660b254597e55", - "parent_gene": "", - "protein_md5": "4e9ec3a1d34d7a9f74d6d6bbc3dfc2a2", - "protein_translation": "VSKSERESIIAALHGQSIFNGGGLSPLNKISPSHPPKPATVAVPEETEKKARDVNEKTALLKKKSATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRIEIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQVLSQRTR", - "protein_translation_length": 251, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0232" - ], - [ - "gene_synonym", - "GI:16128217" - ], - [ - "gene_synonym", - "dinB" - ], - [ - "gene_synonym", - "EcoGene:EG13141" - ], - [ - "gene_synonym", - "JW0221" - ], - [ - "gene_synonym", - "dinP" - ], - [ - "gene_synonym", - "ASAP:ABE-0000789" - ], - [ - "gene_synonym", - "NP_414766.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47155" - ], - [ - "gene_synonym", - "b0231" - ], - [ - "gene_synonym", - "GeneID:944922" - ] - ], - "dna_sequence": "ATGCGTAAAATCATTCATGTGGATATGGACTGCTTTTTCGCCGCAGTGGAGATGCGCGACAATCCCGCCCTGCGCGATATCCCTATTGCTATTGGCGGCAGCCGCGAACGTCGGGGGGTGATCAGCACCGCCAATTATCCCGCGCGTAAATTTGGCGTACGTAGCGCTATGCCGACAGGGATGGCGCTCAAATTATGCCCACATCTCACCTTGCTTCCGGGGCGCTTTGACGCCTACAAAGAAGCCTCAAATCATATCCGTGAAATCTTCTCGCGCTACACCTCGCGCATTGAACCGTTGTCACTGGATGAGGCTTATCTCGATGTCACCGATAGCGTCCATTGCCACGGTTCTGCGACCCTCATCGCCCAGGAAATCCGCCAGACAATCTTCAACGAGCTGCAACTGACGGCGTCTGCGGGCGTGGCACCAGTAAAGTTTCTCGCCAAAATCGCCTCCGACATGAATAAACCCAACGGCCAGTTTGTGATTACGCCGGCAGAAGTTCCGGCATTTTTACAAACCTTACCGCTGGCAAAAATCCCCGGCGTCGGCAAAGTCTCAGCGGCAAAACTGGAAGCGATGGGGCTGCGGACCTGCGGTGATGTACAAAAGTGTGATCTGGTGATGCTGCTTAAACGCTTTGGCAAATTTGGCCGCATTTTGTGGGAGCGTAGTCAGGGGATTGACGAACGCGATGTTAACAGCGAACGGTTGCGAAAATCCGTCGGCGTGGAACGCACGATGGCGGAAGATATTCATCACTGGTCTGAATGTGAAGCGATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGTGCGTCTGGTGGGGCTGCATGTGACGTTGCTTGACCCGCAAATGGAAAGACAACTGGTGCTGGGATTATGA", 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"gene_synonym", - "GI:16128218" - ], - [ - "gene_synonym", - "JW0222" - ], - [ - "gene_synonym", - "NP_414767.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47156" - ] - ], - "dna_sequence": "ATGCATCGAATTCTCGCTGAAAAATCGGTCAATATCACTGAGTTACGTAAAAACCCAGCTAAATACTTTATTGATCAACCGGTTGCGGTTCTTTCTAATAATCGCCCCGCAGGATATCTCTTAAGTGCCAGCGCATTCGAAGCGTTAATGGACATGCTTGCTGAACAAGAGGAGAAAAAGCCCATAAAGGCGCGCTTCCGTCCAAGTGCTGCAAGATTAGAGGAAATTACACGCCGCGCTGAACAATATCTTAATGATATGACGGATGATGATTTCAATGACTTTAAGGAATAA", - "dna_sequence_length": 294, - "functions": [ - "antitoxin of the YafO-YafN toxin-antitoxin system" - ], - "id": "CDS_223", - "location": [ - [ - "NC_000913", - 252005, - "+", - 294 - ] - ], - "md5": "5c96f049f8670093c54010697eee88c2", - "parent_gene": "", - "protein_md5": "ecc5a635e995e76849ec0f547771981e", - "protein_translation": "MHRILAEKSVNITELRKNPAKYFIDQPVAVLSNNRPAGYLLSASAFEALMDMLAEQEEKKPIKARFRPSAARLEEITRRAEQYLNDMTDDDFNDFKE", - "protein_translation_length": 97, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yafO" - ], - [ - "gene_synonym", - "ECK0234" - ], - [ - "gene_synonym", - "EcoGene:EG13152" - ], - [ - "gene_synonym", - "GeneID:944916" - ], - [ - "gene_synonym", - "JW0223" - ], - [ - "gene_synonym", - "GI:16128219" - ], - [ - "gene_synonym", - "ASAP:ABE-0000795" - ], - [ - "gene_synonym", - "b0233" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47157" - ], - [ - "gene_synonym", - "NP_414768.1" - ] - ], - "dna_sequence": "ATGCGGGTATTCAAAACAAAACTTATTCGCCTGCAACTTACAGCAGAGGAACTTGATGCGTTAACGGCGGATTTTATTTCCTATAAGCGTGACGGTGTTTTGCCAGATATATTTGGTCGCGATGCACTCTACGACGACTCCTTTACCTGGCCATTAATCAAATTTGAGCGAGTTGCTCATATTCATCTGGCAAATGAGAATAATCCATTTCCGCCACAGTTGCGCCAATTCAGCAGAACGAATGACGAAGCGCATTTGGTATATTGTCAGGGGGCGTTTGATGAGCAAGCATGGTTGCTCATTGCCATTCTGAAACCTGAACCTCATAAACTGGCTCGAGATAACAACCAAATGCATAAAATTGGGAAAATGGCAGAAGCGTTTCGCATGCGTTTTTGA", - "dna_sequence_length": 399, - "functions": [ - "mRNA interferase toxin of the YafO-YafN toxin-antitoxin system" - ], - "id": "CDS_224", - "location": [ - [ - "NC_000913", - 252301, - "+", - 399 - ] - ], - "md5": "3218cd5c03743f83dd7b3e3ebd2d9272", - "parent_gene": "", - "protein_md5": "3d59728167be71a1ea25f5f9e3364ea3", - "protein_translation": "MRVFKTKLIRLQLTAEELDALTADFISYKRDGVLPDIFGRDALYDDSFTWPLIKFERVAHIHLANENNPFPPQLRQFSRTNDEAHLVYCQGAFDEQAWLLIAILKPEPHKLARDNNQMHKIGKMAEAFRMRF", - "protein_translation_length": 132, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944912" - ], - [ - "gene_synonym", - "ECK0235" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47158" - ], - [ - "gene_synonym", - "NP_414769.1" - ], - [ - "gene_synonym", - "EcoGene:EG13153" - ], - [ - "gene_synonym", - "GI:16128220" - ], - [ - "gene_synonym", - "JW0224" - ], - [ - "gene_synonym", - "b0234" - ], - [ - "gene_synonym", - "yafP" - ], - [ - "gene_synonym", - "ASAP:ABE-0000801" - ] - ], - "dna_sequence": "ATGAATAACATACAAATAAGAAACTATCAGCCTGGCGATTTTCAGCAACTATGCGCTATTTTCATTAGAGCGGTTACGATGACCGCCAGTCAGCATTATTCACCACAACAAATTTCCGCCTGGGCGCAGATTGACGAATCTCGCTGGAAGGAGAAACTCGCGAAATCACAAGTGTGGGTTGCGATCATTAATGCACAACCGGTTGGTTTTATTTCCCGCATTGAACATTATATCGATATGTTATTTGTTGACCCTGAATACACCCGCCGTGGGGTTGCCAGCGCTTTGTTAAAACCTTTGATTAAGTCTGAATCCGAACTTACGGTGGACGCAAGCATAACCGCAAAACCCTTTTTTGAACGTTATGGTTTTCAGACAGTTAAGCAGCAGCGCGTTGAATGCCGGGGAGCGTGGTTTACTAATTTTTATATGCGATATAAACCGCAACATTAA", - "dna_sequence_length": 453, - "functions": [ - "GNAT family putative N-acetyltransferase" - ], - "id": "CDS_225", - "location": [ - [ - "NC_000913", - 252709, - "+", - 453 - ] - ], - "md5": "dd3e6aebca248a96fbe31db35ce098d5", - "parent_gene": "", - "protein_md5": "c2789699b17058c323cc6f7a230d8997", - "protein_translation": "MNNIQIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQISAWAQIDESRWKEKLAKSQVWVAIINAQPVGFISRIEHYIDMLFVDPEYTRRGVASALLKPLIKSESELTVDASITAKPFFERYGFQTVKQQRVECRGAWFTNFYMRYKPQH", - "protein_translation_length": 150, - "type": "CDS" - }, - { 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"aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28369" - ], - [ - "gene_synonym", - "ECK0237" - ], - [ - "gene_synonym", - "EcoGene:EG11496" - ], - [ - "gene_synonym", - "prfH" - ], - [ - "gene_synonym", - "JW0226" - ], - [ - "gene_synonym", - "b0236" - ], - [ - "gene_synonym", - "ASAP:ABE-0000807" - ], - [ - "gene_synonym", - "GeneID:947374" - ] - ], - "dna_sequence": "GTGCTGGAAACAGAAACGGGCCGCTACTCTGACACACTGCGTTCGGCGCTGGTTTCTCTCGATGGCGATAACGCATGGGCATTAAGCGAAAGCTGGTGTGGCACTATTCAGTGGATTTGTCCGAGTCCGTATCGGCCTCATCATGGGCGCAAAAACTGGTTTCTGGGCATTGGGCGTTTTACCGCTGATGAGCAGGAACAATCGGATGCAATCCGTTATGAGACGCTGCGTTCGTCGGGGCCGGGCGGTCAACATGTCAATAAAACCGACTCGGCGGTACGCGCCACGCATTTGGCATCCGGTATTAGCGTGAAGGTTCAGTCAGAGCGTAGTCAGCATGCTAACAAGCGGCTGGCACGATTGCTGATTGCCTGGAAGCTGGAGCAACAGCAACAGGAAAATAGCGCGGCGCTGAAATCGCAGCGGCGAATGTTCCATCACCAGATTGAACGTGGCAACCCGCGACGGACATTTACAGGGATGGCTTTTATCGAAGGATAA", - "dna_sequence_length": 501, - "id": "CDS_227", - "location": [ - [ - "NC_000913", - 253702, - "+", - 501 - ] - ], - "md5": "92c9263a10fb983ede04d6f584cd46ef", - "parent_gene": "", - "protein_md5": "35b179e7270a3e8c4908043932769be7", - "protein_translation": "VLETETGRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADEQEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLLIAWKLEQQQQENSAALKSQRRMFHHQIERGNPRRTFTGMAFIEG", - "protein_translation_length": 166, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "pepH" - ], - [ - "gene_synonym", - "NP_414772.1" - ], - [ - "gene_synonym", - "ECK0238" - ], - [ - "gene_synonym", - "EcoGene:EG10695" - ], - [ - "gene_synonym", - "pepD" - ], - [ - "gene_synonym", - "JW0227" - ], - [ - "gene_synonym", - "GI:16128223" - ], - [ - "gene_synonym", - "GeneID:945013" - ], - [ - "gene_synonym", - "ASAP:ABE-0000809" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15288" - ], - [ - "gene_synonym", - "b0237" - ] - ], - "dna_sequence": "GTGTCTGAACTGTCTCAATTATCTCCACAGCCGCTGTGGGATATTTTTGCCAAAATCTGTTCTATTCCTCACCCGTCCTATCATGAAGAGCAACTCGCTGAATACATTGTTGGTTGGGCAAAAGAGAAAGGTTTCCATGTCGAACGCGATCAGGTAGGTAATATCCTGATTCGTAAACCTGCTACCGCAGGTATGGAAAATCGTAAACCGGTCGTCTTACAGGCCCACCTCGATATGGTGCCGCAGAAAAATAACGACACCGTGCATGACTTCACGAAAGATCCTATCCAGCCTTATATTGATGGCGAATGGGTTAAAGCGCGCGGCACCACGCTGGGTGCGGATAACGGCATTGGTATGGCCTCTGCGCTGGCGGTTCTGGCTGACGAAAACGTGGTTCACGGCCCGCTGGAAGTGCTGCTGACCATGACCGAAGAAGCCGGTATGGACGGTGCGTTCGGCTTACAGGGCAACTGGTTGCAGGCTGATATTCTGATTAACACCGACTCCGAAGAAGAAGGTGAAATCTACATGGGTTGTGCGGGGGGTATCGACTTCACCTCCAACCTGCATTTAGATCGTGAAGCGGTTCCAGCTGGTTTTGAAACCTTCAAGTTAACCTTAAAAGGTCTGAAAGGCGGTCACTCCGGCGGGGAAATCCACGTTGGGCTGGGTAATGCCAACAAACTGCTGGTGCGCTTCCTGGCGGGTCATGCGGAAGAACTGGATCTGCGCCTTATCGATTTCAACGGCGGCACACTGCGTAACGCCATCCCGCGTGAAGCCTTTGCGACCATTGCTGTCGCAGCTGATAAAGTCGACGTCCTGAAATCTCTGGTGAATACCTATCAGGAGATCCTGAAAAACGAGCTGGCAGAAAAAGAGAAAAATCTGGCCTTGTTGCTGGACTCTGTAGCGAACGATAAAGCTGCCCTGATTGCGAAATCTCGCGATACCTTTATTCGTCTGCTGAACGCCACCCCGAACGGTGTGATTCGTAACTCCGATGTAGCCAAAGGTGTGGTTGAAACCTCCCTGAACGTCGGTGTGGTGACCATGACTGACAATAACGTAGAAATTCACTGCCTGATCCGTTCACTGATCGACAGCGGTAAAGACTACGTGGTGAGCATGCTGGATTCGCTGGGTAAACTGGCTGGCGCGAAAACCGAAGCGAAAGGCGCATATCCTGGCTGGCAGCCGGACGCTAATTCTCCGGTGATGCATCTGGTACGTGAAACCTATCAGCGCCTGTTCAACAAGACGCCGAACATCCAGATTATCCACGCGGGCCTGGAATGTGGTCTGTTCAAAAAACCGTATCCGGAAATGGACATGGTTTCTATCGGGCCAACTATCACCGGTCCACACTCTCCGGATGAGCAAGTTCACATCGAAAGCGTAGGTCATTACTGGACACTGCTGACTGAACTGCTGAAAGAAATTCCGGCGAAGTAA", 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"gene_synonym", - "EcoGene:EG10414" - ], - [ - "gene_synonym", - "ECK0239" - ], - [ - "gene_synonym", - "gxu" - ], - [ - "gene_synonym", - "b0238" - ], - [ - "gene_synonym", - "GI:16128224" - ], - [ - "gene_synonym", - "gpt" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9M5" - ], - [ - "gene_synonym", - "ASAP:ABE-0000814" - ], - [ - "gene_synonym", - "gpp" - ], - [ - "gene_synonym", - "JW0228" - ] - ], - "dna_sequence": "ATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTATTCGTCATGTCGATACCGTTTGTATTTCCAGCTACGATCACGACAACCAGCGCGAGCTTAAAGTGCTGAAACGCGCAGAAGGCGATGGCGAAGGCTTCATCGTTATTGATGACCTGGTGGATACCGGTGGTACTGCGGTTGCGATTCGTGAAATGTATCCAAAAGCGCACTTTGTCACCATCTTCGCAAAACCGGCTGGTCGTCCGCTGGTTGATGACTATGTTGTTGATATCCCGCAAGATACCTGGATTGAACAGCCGTGGGATATGGGCGTCGTATTCGTCCCGCCAATCTCCGGTCGCTAA", - "dna_sequence_length": 459, - "functions": [ - "xanthine phosphoribosyltransferase", - "xanthine-guanine phosphoribosyltransferase" - ], - "id": "CDS_229", - "location": [ - [ - "NC_000913", - 255977, - "+", - 459 - ] - ], - "md5": "81c950e7a246c3ef95ff5e7592fabefe", - "parent_gene": "", - "protein_md5": "dc744fab454245b67afe74913115ff1f", - "protein_translation": "MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR", - "protein_translation_length": 152, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946039" - ], - [ - "gene_synonym", - "ECK0240" - ], - [ - "gene_synonym", - "NP_414774.1" - ], - [ - "gene_synonym", - "yafA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04335" - ], - [ - "gene_synonym", - "GI:16128225" - ], - [ - "gene_synonym", - "b0239" - ], - [ - "gene_synonym", - "ASAP:ABE-0000817" - ], - [ - "gene_synonym", - "EcoGene:EG11091" - ], - [ - "gene_synonym", - "frsA" - ], - [ - "gene_synonym", - "JW0229" - ] - ], - "dna_sequence": "ATGACACAGGCAAACCTGAGCGAAACCCTGTTCAAACCCCGCTTTAAACATCCTGAAACCTCGACGCTAGTCCGCCGCTTTAATCACGGCGCACAACCGCCTGTGCAGTCGGCCCTTGATGGTAAAACCATCCCTCACTGGTATCGCATGATTAACCGTCTGATGTGGATCTGGCGCGGCATTGACCCACGCGAAATCCTCGACGTCCAGGCACGTATTGTGATGAGCGATGCCGAACGTACCGACGATGATTTATACGATACGGTGATTGGCTACCGTGGCGGCAACTGGATTTATGAGTGGGCCACCCAGGCGATGGTGTGGCAACAAAAAGCCTGTGCGGAAGACGATCCGCAACTCAGTGGTCGTCACTGGCTGCATGCGGCTACGTTGTACAACATTGCCGCCTATCCTCATCTGAAAGGAGATGACCTGGCCGAGCAAGCGCAGGCTTTGTCAAACCGCGCCTATGAAGAGGCCGCTCAGCGTCTACCGGGCACGATGCGGCAGATGGAGTTTACCGTACCCGGCGGTGCGCCCATCACCGGCTTTTTGCATATGCCGAAAGGCGATGGCCCGTTCCCGACGGTATTAATGTGTGGTGGTCTGGATGCGATGCAGACGGACTATTACAGCCTGTATGAACGTTATTTTGCGCCGCGCGGCATTGCGATGCTGACTATTGATATGCCGTCGGTGGGCTTTTCTTCAAAATGGAAGCTCACCCAGGACTCCAGCCTGTTGCATCAGCACGTCTTAAAGGCGCTGCCTAACGTACCGTGGGTGGATCACACTCGCGTCGCGGCCTTTGGTTTCCGTTTCGGCGCTAACGTTGCCGTGCGTCTGGCATACCTTGAATCGCCGCGTCTGAAAGCGGTTGCCTGTCTTGGTCCGGTAGTTCATACCCTGTTGAGTGATTTTAAGTGCCAGCAACAGGTGCCGGAAATGTATCTTGACGTTCTGGCCAGTCGTTTGGGGATGCATGATGCTTCCGATGAAGCGTTGCGCGTGGAGCTGAATCGCTATTCATTAAAAGTGCAAGGATTGCTGGGACGTCGCTGCCCAACGCCAATGTTATCAGGCTACTGGAAGAACGATCCGTTCAGCCCGGAAGAGGACTCACGCTTAATCACCTCATCATCTGCTGACGGTAAATTATTAGAGATCCCATTTAACCCGGTGTATCGGAATTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAA", - "dna_sequence_length": 1245, - "functions": [ - "fermentation-respiration switch protein", - "PTS Enzyme IIA(Glc)-binding protein", - "pNP-butyrate esterase activity" - ], - "id": "CDS_230", - "location": [ - [ - "NC_000913", - 256527, - "+", - 1245 - ] - ], - "md5": "c5edeec741adfcff60695b5135e85853", - "parent_gene": "", - "protein_md5": "d6715aa924bfc0281640a5050fd2fa36", - "protein_translation": "MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTIPHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWATQAMVWQQKACAEDDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEAAQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYFAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGANVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFNPVYRNFDKGLQEITDWIEKRLC", - "protein_translation_length": 414, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945077" - ], - [ - "gene_synonym", - "ASAP:ABE-0000821" - ], - [ - "gene_synonym", - "ECK0241" - ], - [ - "gene_synonym", - "JW0230" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24251" - ], - [ - "gene_synonym", - "b0240" - ], - [ - "gene_synonym", - "EcoGene:EG11092" - ], - [ - "gene_synonym", - "crl" - ] - ], - "dna_sequence": "ATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGAAGTGGTTGAACGACTGGAGCACACCCTGCGTGAGTTTCACGAGAAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGA", - "dna_sequence_length": 402, - "id": "CDS_231", - "location": [ - [ - "NC_000913", - 257829, - "+", - 71 - ], - [ - "NC_000913", - 258676, - "+", - 331 - ] - ], - "md5": "f6cc46cda3db482cf261efa371a888ca", - "parent_gene": "", - "protein_md5": "214b4b54f12329f8906ac58e750461cd", - "protein_translation": "MTLPSGHPKSRLIKKFTALGPYIREGKCKDNRFFFDCLAVCVNVKPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLREFHEKLRELLTTLNLKLEPADDFRDEPVKLTA", - "protein_translation_length": 133, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02932" - ], - [ - "gene_synonym", - "ASAP:ABE-0000823" - ], - [ - "gene_synonym", - "GeneID:944926" - ], - [ - "gene_synonym", - "ECK0242" - ], - [ - "gene_synonym", - "ompE" - ], - [ - "gene_synonym", - "JW0231" - ], - [ - "gene_synonym", - "NP_414776.1" - ], - [ - "gene_synonym", - "phoE" - ], - [ - "gene_synonym", - "GI:16128227" - ], - [ - "gene_synonym", - "b0241" - ], - [ - "gene_synonym", - "EcoGene:EG10729" - ] - ], - "dna_sequence": "ATGAAAAAGAGCACTCTGGCATTAGTGGTGATGGGCATTGTGGCATCTGCATCTGTACAGGCTGCAGAAATATATAATAAAGACGGTAATAAACTGGATGTCTATGGCAAAGTTAAAGCCATGCATTATATGAGTGATAACGCCAGTAAAGATGGCGACCAGAGTTATATCCGTTTTGGTTTCAAAGGCGAAACACAAATTAACGATCAACTGACTGGTTATGGTCGTTGGGAAGCAGAGTTTGCCGGTAATAAAGCAGAGAGTGATACTGCACAGCAAAAAACGCGTCTCGCTTTTGCCGGGTTGAAATATAAAGATTTGGGTTCTTTCGATTATGGTCGTAACCTGGGGGCGTTGTATGACGTGGAAGCCTGGACCGATATGTTCCCGGAATTTGGTGGCGATTCCTCGGCGCAGACCGACAACTTTATGACCAAACGCGCCAGCGGTCTGGCGACGTATCGGAACACCGACTTCTTCGGCGTTATCGATGGCCTGAACTTAACCCTGCAATATCAAGGGAAAAACGAAAACCGCGACGTTAAAAAGCAAAACGGCGATGGCTTCGGCACGTCATTGACATATGACTTTGGCGGCAGCGATTTCGCCATTAGTGGGGCCTATACCAACTCAGATCGCACCAACGAGCAGAACCTGCAAAGCCGTGGCACAGGCAAGCGTGCAGAAGCATGGGCAACAGGTCTGAAATACGATGCCAATAATATTTATCTGGCAACTTTCTATTCTGAAACACGCAAAATGACGCCAATAACTGGCGGCTTTGCCAATAAGACACAGAACTTTGAAGCGGTCGCTCAATACCAGTTTGACTTTGGTCTGCGTCCATCGCTGGGTTATGTCTTATCGAAAGGGAAAGATATTGAAGGTATCGGTGATGAAGATCTGGTCAATTATATCGACGTCGGTGCTACGTATTATTTCAACAAAAATATGTCAGCGTTTGTTGATTATAAAATCAACCAACTGGATAGCGATAACAAATTGAATATTAATAATGATGATATTGTCGCGGTTGGCATGACGTATCAGTTTTAA", - "dna_sequence_length": 1056, - "functions": [ - "outer membrane phosphoporin protein E" - ], - "id": "CDS_232", - "location": [ - [ - "NC_000913", - 260100, - "-", - 1056 - ] - ], - "md5": "9c19a7f5e3c950976667623c329d036a", - "parent_gene": "", - "protein_md5": "452448727b2c894066601a1370c6f052", - "protein_translation": "MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYMSDNASKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGLKYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQNLQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF", - "protein_translation_length": 351, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414777.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7B5" - ], - [ - "gene_synonym", - "GeneID:946425" - ], - [ - "gene_synonym", - "JW0232" - ], - [ - "gene_synonym", - "EcoGene:EG10768" - ], - [ - "gene_synonym", - "pro" - ], - [ - "gene_synonym", - "ASAP:ABE-0000830" - ], - [ - "gene_synonym", - "GI:16128228" - ], - [ - "gene_synonym", - "b0242" - ], - [ - "gene_synonym", - "proB" - ], - [ - "gene_synonym", - "ECK0243" - ] - ], - "dna_sequence": "ATGAGTGACAGCCAGACGCTGGTGGTAAAACTCGGCACCAGTGTGCTAACAGGCGGATCGCGCCGTCTGAACCGTGCCCATATCGTTGAACTTGTTCGCCAGTGCGCGCAGTTACATGCCGCCGGGCATCGGATTGTTATTGTGACGTCGGGCGCGATCGCCGCCGGACGTGAGCACCTGGGTTACCCGGAACTGCCAGCGACCATCGCCTCGAAACAACTGCTGGCGGCGGTAGGGCAGAGTCGACTGATTCAACTGTGGGAACAGCTGTTTTCGATTTATGGCATTCACGTCGGGCAAATGCTGCTGACCCGTGCTGATATGGAAGACCGTGAACGCTTCCTGAACGCCCGCGACACCCTGCGAGCGTTGCTCGATAACAATATCGTTCCGGTAATCAATGAGAACGATGCTGTCGCTACGGCAGAGATTAAGGTCGGCGATAACGATAACCTTTCTGCGCTGGCGGCGATTCTTGCGGGTGCCGATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTATTGGTGATGTGATGGAAGGCATTTCCGTCGGTACGCTGTTCCATGCCCAGGCGACTCCGCTTGAAAACCGTAAACGCTGGATTTTCGGTGCGCCGCCGGCGGGTGAAATCACGGTAGATGAAGGGGCAACTGCCGCCATTCTGGAACGCGGCAGCTCCCTGTTGCCGAAAGGCATTAAAAGCGTGACTGGCAATTTCTCGCGTGGTGAAGTCATCCGCATTTGCAACCTCGAAGGCCGCGATATCGCCCACGGCGTCAGTCGTTACAACAGCGATGCATTACGCCGTATTGCCGGACACCACTCGCAAGAAATTGATGCAATACTGGGATATGAATACGGCCCGGTTGCCGTTCACCGTGATGACATGATTACCCGTTAA", - "dna_sequence_length": 1104, - "functions": [ - "gamma-glutamate kinase" - ], - "id": "CDS_233", - "location": [ - [ - "NC_000913", - 260388, - "+", - 1104 - ] - ], - "md5": "295cc0a94eb37bf52ce185ed07ad9998", - "parent_gene": "", - "protein_md5": "13119f177bb40251c69d693b6a942708", - "protein_translation": "MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAGEITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDALRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR", - "protein_translation_length": 367, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0244" - ], - [ - "gene_synonym", - "ASAP:ABE-0000832" - ], - [ - "gene_synonym", - "pro" - ], - [ - "gene_synonym", - "JW0233" - ], - [ - "gene_synonym", - "GeneID:946680" - ], - [ - "gene_synonym", - "EcoGene:EG10767" - ], - [ - "gene_synonym", - "NP_414778.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07004" - ], - [ - "gene_synonym", - "GI:16128229" - ], - [ - "gene_synonym", - "b0243" - ], - [ - "gene_synonym", - "proA" - ] - ], - "dna_sequence": "ATGCTGGAACAAATGGGCATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCACAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCACTGACGCCCGCACGGCTGAAAGGCATTGCCGACGATGTACGTCAGGTGTGCAACCTCGCCGATCCGGTGGGGCAGGTAATCGATGGCGGCGTACTGGACAGCGGCCTGCGTCTTGAGCGTCGTCGCGTACCGCTGGGGGTTATTGGCGTGATTTATGAAGCGCGCCCGAACGTGACGGTTGATGTCGCTTCGCTGTGCCTGAAAACCGGTAATGCGGTGATCCTGCGCGGTGGCAAAGAAACGTGTCGCACTAACGCTGCAACGGTGGCGGTGATTCAGGACGCCCTGAAATCCTGCGGCTTACCGGCGGGTGCCGTGCAGGCGATTGATAATCCTGACCGTGCGCTGGTCAGTGAAATGCTGCGTATGGATAAATACATCGACATGCTGATCCCGCGTGGTGGCGCTGGTTTGCATAAACTGTGCCGTGAACAGTCGACAATCCCGGTGATCACAGGTGGTATAGGCGTATGCCATATTTACGTTGATGAAAGTGTAGAGATCGCTGAAGCATTAAAAGTGATCGTCAACGCGAAAACTCAGCGTCCGAGCACATGTAATACGGTTGAAACGTTGCTGGTGAATAAAAACATCGCCGATAGCTTCCTGCCCGCATTAAGCAAACAAATGGCGGAAAGCGGCGTGACATTACACGCAGATGCAGCTGCACTGGCGCAGTTGCAGGCAGGCCCTGCGAAGGTGGTTGCTGTTAAAGCCGAAGAGTATGACGATGAGTTTCTGTCATTAGATTTGAACGTCAAAATCGTCAGCGATCTTGACGATGCCATCGCCCATATTCGTGAACACGGCACACAACACTCCGATGCGATCCTGACCCGCGATATGCGCAACGCCCAGCGTTTTGTTAACGAAGTGGATTCGTCCGCTGTTTACGTTAACGCCTCTACGCGTTTTACCGACGGCGGCCAGTTTGGTCTGGGTGCGGAAGTGGCGGTAAGCACACAAAAACTCCACGCGCGTGGCCCAATGGGGCTGGAAGCACTGACCACTTACAAGTGGATCGGCATTGGTGATTACACCATTCGTGCGTAA", 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"gene_synonym", - "ECK4458" - ] - ], - "dna_sequence": "ATGCAACCAGAAGTTGAAGTATTAACCGATCATAATGAGCTAATTTGTTCGAGCTTTATTGAA", - "dna_sequence_length": 63, - "id": "CDS_235", - "location": [ - [ - "NC_000913", - 263212, - "-", - 63 - ] - ], - "md5": "c5fe4d4911e1a1620ce84e1543e05edc", - "parent_gene": "", - "protein_md5": "2d544530374805dd10c835f9f318ca9e", - "protein_translation": "MQPEVEVLTDHNELICSSFIE", - "protein_translation_length": 21, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0246" - ], - [ - "gene_synonym", - "ASAP:ABE-0000836" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77692" - ], - [ - "gene_synonym", - "NP_414779.1" - ], - [ - "gene_synonym", - "JW0234" - ], - [ - "gene_synonym", - "GeneID:946726" - ], - [ - "gene_synonym", - "EcoGene:EG14333" - ], - [ - "gene_synonym", - "GI:16128230" - ], - [ - "gene_synonym", - "b0245" - ], - [ - "gene_synonym", - "ykfI" - ] - ], - "dna_sequence": "ATGAAAACTTTACCTGCAATAACTCAGCGGGCGGTGAAGCCCTGCCTGTCACCCGTGGCTGTCTGGCAAATGTTACTGACACGTCTGCTGGAACAGCACTATGGTCTGACAATAAACGACACGCCATTCTGCAATGAGGCTGTGATTAAGGAACACATCGATGCCGGTATCACCCTAGCCGATGCCGTGAATTTTCTGGTAGAAAAATACGAGCTGGTTCGTATCGACAGGAAGGGATTTAGCTGGCAGGAACAATCTCCTTATCTCCGGGCTGCAGACATTCTGCGAGCGCGGCAGGCAACTGGCTTGTTGCGGCAAAGCCGTAACAACGTAGTACGATGA", - "dna_sequence_length": 342, - "functions": [ - "CP4-6 prophage", - "toxin of the YkfI-YafW toxin-antitoxin system" - ], - "id": "CDS_236", - "location": [ - [ - "NC_000913", - 263669, - "-", - 342 - ] - ], - "md5": "b5bfa44614e841fe5a1762dbd4b0f883", - "parent_gene": "", - "protein_md5": "07e71f6d32adcd3d7962aafbdb25f965", - "protein_translation": "MKTLPAITQRAVKPCLSPVAVWQMLLTRLLEQHYGLTINDTPFCNEAVIKEHIDAGITLADAVNFLVEKYELVRIDRKGFSWQEQSPYLRAADILRARQATGLLRQSRNNVVR", - "protein_translation_length": 113, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0247" - ], - [ - "gene_synonym", - "NP_414780.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47684" - ], - [ - "gene_synonym", - "EcoGene:EG13335" - ], - [ - "gene_synonym", - "JW0235" - ], - [ - "gene_synonym", - "GeneID:944929" - ], - [ - "gene_synonym", - "ASAP:ABE-0000838" - ], - [ - "gene_synonym", - "GI:16128231" - ], - [ - "gene_synonym", - "yafW" - ], - [ - "gene_synonym", - "b0246" - ] - ], - "dna_sequence": "ATGAGCAACCCTACCAGGGGCCTGCAGCGGGAGATTACACTGCGCCTGGGAGCCCGTCTGGTGCAGGAAGGCAACCGACTGCATTATCTGGCTGACCGGGCCAGCATCACCGGCAAGTTCAGTGACATCGAATGCCGGAAGCTGGATGAAACATTCCCGCACTTTATCCTCCAGATGGAATCGATGCTGACCACCGGTGAACTCAGCCCCCACCATGCCCACTGCGTTACCCTGTACCACAACGATTTAACCTGCGAAGCCGACACCCTTGGCAGTTGCGGCTACGTATACATCGCCATTTACCCCACTCAGCGTTAA", - "dna_sequence_length": 318, - "functions": [ - "CP4-6 prophage", - "antitoxin of the YkfI-YafW toxin-antitoxin system" - ], - "id": "CDS_237", - "location": [ - [ - "NC_000913", - 264007, - "-", - 318 - ] - ], - "md5": "03ca15f3b99e7bdc87a189708233c5d7", - "parent_gene": "", - "protein_md5": "d5b020bf2fce7e5a3b5a4f6d37dd224b", - "protein_translation": "MSNPTRGLQREITLRLGARLVQEGNRLHYLADRASITGKFSDIECRKLDETFPHFILQMESMLTTGELSPHHAHCVTLYHNDLTCEADTLGSCGYVYIAIYPTQR", - "protein_translation_length": 105, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:1450236" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q9XB42" - ], - [ - "gene_synonym", - "YP_588435.1" - ], - [ - "gene_synonym", - "GI:94541094" - ], - [ - "gene_synonym", - "ECK0248" - ], - [ - "gene_synonym", - "JW5956" - ], - [ - "gene_synonym", - "ASAP:ABE-0285025" - ], - [ - "gene_synonym", - "EcoGene:EG14332" - ], - [ - "gene_synonym", - "b4504" - ], - [ - "gene_synonym", - "ykfH" - ] - ], - "dna_sequence": "ATGAAAATTATCAGTAAACGCAGGGCAATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGCAAATACCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGACGTTCCGGATATCGCCGGAGTCCTCGCGGTATACGCCGAACGCCGCCAGGACCGCAATGGGCCCTATACCTGCCTGATGAGCATCACCCTGAACTGA", - "dna_sequence_length": 222, - "functions": [ - "uncharacterized 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"ATGAAACAGCTTTCCTTTTTACCCGGCGAGATGACGCCACAGGACCGGCGTCTCATTCAGCGGGCGCTCAGGGCTCTGGACCGCCACCTGCATGAGCCCGGCGTAGCCTTCACCTCTACCCACGCCGTACGTGAATGGCTGCGACTGCATATGGCCGCGCTTGAGCGGGAAGAGTTCCGGGTGTTGTATCTGGACAACCAGAATCAGTTGATTGCCCATGAAACGCTCTTCACCGGCACGATTAACCGCACCGAGGTGCATCCCCGGGAGGTGGTCAAACGTGCTCTGCACTTCAACGCGGCGGCGGTGATACTCGCGCATAACCATCCTTCCGGCGAGACGACACCTAGCCAGGCCGACAAAACCCTCACGCAGCGACTGGTTCAGGTGCTTCAGCTGGTGGATATCCGTGTCCCTGACCATCTGATTGTCGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGA", - "dna_sequence_length": 477, - "functions": [ - "CP4-6 prophage", - "RadC-like JAB domain protein" - ], - "id": "CDS_239", - "location": [ - [ - "NC_000913", - 264732, - "-", - 477 - ] - ], - "md5": "1eb783ebf51e22ddd57a5202871a1752", - "parent_gene": "", - "protein_md5": "6b46b5f8ab183a56d32d7ac01df3bea9", - "protein_translation": "MKQLSFLPGEMTPQDRRLIQRALRALDRHLHEPGVAFTSTHAVREWLRLHMAALEREEFRVLYLDNQNQLIAHETLFTGTINRTEVHPREVVKRALHFNAAAVILAHNHPSGETTPSQADKTLTQRLVQVLQLVDIRVPDHLIVGGRQIYSFAEHGLL", - "protein_translation_length": 158, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5022" - ], - [ - "gene_synonym", - "GeneID:944931" - ], - [ - "gene_synonym", - "NP_414782.1" - ], - [ - "gene_synonym", - "EcoGene:EG13336" - ], - [ - "gene_synonym", - "b0248" - ], - [ - "gene_synonym", - "ASAP:ABE-0000843" - ], - [ - "gene_synonym", - "yafX" - ], - [ - "gene_synonym", - "GI:16128233" - ], - [ - "gene_synonym", - "ECK0250" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75676" - ] - ], - "dna_sequence": "ATGACAACACAGACGCAGCACGACCTCGCACCCGCTAACCAACCCGAATTTGAACTGACCGTCACGCCGGTCCCCGATGAACAGCGTATCGATTTCTGGCCACAGTACTTTGGCGCTATCCCGCAGTGGCTACTCCTGGAGCCGCATATCTTCGCCTGGATGGACCGCTTCTGTGAGGGCTACAGCGGTGGTATCTGGTCGTTCTACACCCTCAGCAATGGCGGCGCATTTATGTCCCCCGAGCCTGACAACGATGAGACATGGCGTCTGTTTAACTGCCTGAACGGTAACGATGCCCAAATGAGTGCAGAAGCAGCAGGTATTGCTGTCTGCCTGATTGCGTATAGCCACCATGCCTGCCGTACAGAATGTGACGCGATGACCGCACACTATTACCGCCTGCGGGAGTATGCCATGCAACATCCAGAGGCTCACGCCATTCTGCGTATTATCGACTGA", - 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"gene_synonym", - "GI:16128235" - ], - [ - "gene_synonym", - "ykfB" - ], - [ - "gene_synonym", - "EcoGene:EG13548" - ], - [ - "gene_synonym", - "b0250" - ], - [ - "gene_synonym", - "ECK0252" - ] - ], - "dna_sequence": "ATGACAATACTTTCACTAAGTCGGTTTATGCTGGCGGGTGTACTGCTCGCGAGCTTTAATGCCTCTGCTATCCCGGGGTTCTGGCAGCAGGGTTACGGTCAGGGCAATACGGAATACAGCGTGACCGAAGCCAGCGGAAAGACGTTTACCATCAACTGCACAGGGAACCCGGACCAGAATGGTTTCTATCAGCATTCAGTCTTTCTTACCCTTGCCGATGACAAGATGGTCAGTTCGCACGATGACGACACTACTATCACCGTAGTGATGGATCACCAGCAGTACATTATTCCGTCCAGCCTGGGCTGGCGTAACGGCGATAACGCCTGGTTTGACTTCATCAGCAATATCTCTGAGGCCGGGCAGTTCGACGTCTACGTCAATGACCACAAAGCAGGGACCTTCACTGCGGACCGGAAGAACGCTGAGAAAGTTCTGTCCACTCTCGGAGACTGCAGCAACGACTGA", - "dna_sequence_length": 468, - "functions": [ - "CP4-6 prophage", - "uncharacterized protein" - ], - "id": "CDS_242", - "location": [ - [ - "NC_000913", - 266087, - "-", - 468 - ] - ], - "md5": "f3d1f2536d06329d1afdc1323b7f0ee1", - "parent_gene": "", - "protein_md5": "ac49c39c84f6b9f2b135c73321ff0041", - "protein_translation": "MTILSLSRFMLAGVLLASFNASAIPGFWQQGYGQGNTEYSVTEASGKTFTINCTGNPDQNGFYQHSVFLTLADDKMVSSHDDDTTITVVMDHQQYIIPSSLGWRNGDNAWFDFISNISEAGQFDVYVNDHKAGTFTADRKNAEKVLSTLGDCSND", - "protein_translation_length": 155, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944934" - ], - [ - "gene_synonym", - "EcoGene:EG13337" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77365" - ], - [ - "gene_synonym", - "ASAP:ABE-0000853" - ], - [ - "gene_synonym", - "JW0240" - ], - [ - "gene_synonym", - "yafY" - ], - [ - "gene_synonym", - "ECK0253" - ], - [ - "gene_synonym", - "b0251" - ], - [ - "gene_synonym", - "GI:145698221" - ], - [ - "gene_synonym", - "NP_414785.4" - ] - ], - "dna_sequence": "ATGAAACGTAAAACACTGCCTCTGCTGGCGCTGGTTGCCACCACTCTGTTTCTCATCGCATGCGATGACAGAAGTGATGACCTGAAGGCCATCAGTAAATTTAAGGACCTCACCCCACCGCGTTTCAGTGATGTGGTCAGCCACCAGGATGATGTCAGCGAAGAATGGTCACAGGTTGACTACTTATCCGGTCCCACCTTGCAGGTTTTACGTACCCGCCAGTCGCCCGATGGCTGCGAGGATGGCAGTTACTACTACCTCGTGGATATGCAGGAAAAAACCGTCCAGCCACTGATGAATGCGCTGTGTATTGCCGATAACATCAAACTGGAATACCAGGAGGTGACGGACCCGTATACCAAAGAAAAATACTTTGAGTACGCCCATGACGGCAAACTGATGGGGCAGCTACTGATACCCTCGAACCCTGACAATCAGGAATAA", - "dna_sequence_length": 444, - "functions": [ - "lipoprotein, inner membrane", - "degP regulator", - "CP4-6 prophage" - ], - "id": "CDS_243", - "location": [ - [ - "NC_000913", - 266553, - "-", - 444 - ] - ], - "md5": "4e6b3d29518e73ab14c8aaef48c8ca92", - "parent_gene": "", - "protein_md5": "fb84b81ac66c6584d837ef73c07b92c4", - "protein_translation": "MKRKTLPLLALVATTLFLIACDDRSDDLKAISKFKDLTPPRFSDVVSHQDDVSEEWSQVDYLSGPTLQVLRTRQSPDGCEDGSYYYLVDMQEKTVQPLMNALCIADNIKLEYQEVTDPYTKEKYFEYAHDGKLMGQLLIPSNPDNQE", - "protein_translation_length": 147, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4445" - ], - [ - "gene_synonym", - "ykfL" - ], - [ - "gene_synonym", - "GeneID:5625553" - ], - [ - "gene_synonym", - "b4627" - ], - [ - "gene_synonym", - "EcoGene:EG14378" - ] - ], - "dna_sequence": "ATTATCGCCATTGTTGTCATCGTCATCATTCTGAACAAAACCGGGGTGTCCGACAGTCTCGCGGCCCTGACCCTTGCCACTGTTGCCGCACTGCTGACGGGAGGTGGCGCAGCCGGTGCTGCCAGTGTCGCGCTGACACCGTTCGTCGGCGTGCCGGTGGGTATTTTCGTGGGCATTTATGTCTTTGCCAAAGTGGTTCGTCTGATTTCAGGAAAAAAATAA", - "dna_sequence_length": 222, - "id": "CDS_244", - "location": [ - [ - "NC_000913", - 266774, - "-", - 222 - ] - ], - "md5": "e04441595b71fd2d3086ce86ccc6f3a0", - "parent_gene": "", - "protein_md5": "fed76ec5598091eb942ac37561cb01f7", - "protein_translation": "IIAIVVIVIILNKTGVSDSLAALTLATVAALLTGGGAAGAASVALTPFVGVPVGIFVGIYVFAKVVRLISGKK", - "protein_translation_length": 73, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4444" - ], - [ - "gene_synonym", - "b4628" - ], - [ - "gene_synonym", - "EcoGene:EG14377" - ], - [ - "gene_synonym", - "yafY" - ], - [ - "gene_synonym", - "GeneID:5625554" - ], - [ - "gene_synonym", - "ykfK" - ] - ], - "dna_sequence": "ATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTGGCAGGGGAAACGCTGAGTGTGCGTAAGCTTGCCGCTGAGTTTGGTGTGTCGGTGCGCACGCTGCGGCGTGATTTTCGTGAGCGGCTGATGTATCTGGACCTGGAGTATCAGTCCGGATATTGC", - "dna_sequence_length": 192, - "id": "CDS_245", - "location": [ - [ - "NC_000913", - 266967, - "-", - 192 - ] - ], - "md5": "c037b9ba013f4103be6f6231a8b23b31", - "parent_gene": "", - "protein_md5": "7edbe39071456092b4f378e1f2eb1df6", - "protein_translation": "MTQAERRHDRLAVRLSLIISRLVAGETLSVRKLAAEFGVSVRTLRRDFRERLMYLDLEYQSGYC", - "protein_translation_length": 64, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77206" - ], - [ - "gene_synonym", - "GI:90111102" - ], - [ - "gene_synonym", - "EcoGene:EG13338" - ], - [ - "gene_synonym", - "NP_414786.4" - ], - [ - "gene_synonym", - "JW0242" - ], - [ - "gene_synonym", - "ASAP:ABE-0000856" - ], - [ - "gene_synonym", - "yafZ" - ], - [ - "gene_synonym", - "b0252" - ], - [ - "gene_synonym", - "GeneID:945373" - ], - [ - "gene_synonym", - "ECK0254" - ] - ], - "dna_sequence": "ATGACCCGTCTGGCTTCGCGCTTTGGCGCAGCAAACCTTATCCGTCGCGACCGTCCGTTAACCCGTGAAGAGCTGTTTCGCGTAGTGCCCAGTGTATTCAGTGAGGACAAACACGAGTCCCGTAGTGAGCGTTATACCTATATACCCACCATCTCCCTGCTCGACAGCCTACAGCGAGAAGGCTTCCAGCCATTCTTTGCCTGTCAGACCCGCGTGCGTGACCCGGGTCGTCGTGAACATACAAAGCATATGCTGCGTCTGCGGCGGGAAGGGCAGATCACCGGTAAACAGGTGCCGGAAATTATTCTACTCAACTCTCACGATGGAACCAGTTCGTATCAGATGTTGCCGGGACTATTTCGTGCGGTTTGTCAGAACGGGCTCGTCTGCGGTGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGACGTGGTGAGTCAGGTGATTGAAGGCGCGTATGAGGTGCTGGGGATTTTTGACCGGGTGGAGGAGAAACGGGATGCCATGCAGTCGTTGCTGTTGCCACCCCCGGCACAGCAGGCACTGGCAAAAGCCGCCCTCACATACCGCTTTGGTGAAGACCACCAGCCGGTGACTGAATCGCAGATCCTCTCCCCTCGCCGCTGGCAGGATGAGAGCAATGACCTGTGGACCACGTACCAGCGTATTCAGGAGAACCTGATTAAGGGCGGGCTCAGTGGCCGTAATGCCAAAGGAGGACGGTCACATACCCGTGCCGTTCGCGGTATCGACGGGGACGTGAAACTTAACCGGGCACTGTGGGTGATGGCGGAAGCCCTGCTCACGCAACTGCAGTGA", - "dna_sequence_length": 822, - "functions": [ - "CP4-6 prophage", - "conserved protein" - ], - "id": "CDS_246", - "location": [ - [ - "NC_000913", - 268005, - "-", - 822 - ] - ], - "md5": "31147f733364c323edf9f11d1f2ceed0", - "parent_gene": "", - "protein_md5": "bef8807ebad49fb4b437afd99979e565", - "protein_translation": "MTRLASRFGAANLIRRDRPLTREELFRVVPSVFSEDKHESRSERYTYIPTISLLDSLQREGFQPFFACQTRVRDPGRREHTKHMLRLRREGQITGKQVPEIILLNSHDGTSSYQMLPGLFRAVCQNGLVCGESFGEVRVPHKGDVVSQVIEGAYEVLGIFDRVEEKRDAMQSLLLPPPAQQALAKAALTYRFGEDHQPVTESQILSPRRWQDESNDLWTTYQRIQENLIKGGLSGRNAKGGRSHTRAVRGIDGDVKLNRALWVMAEALLTQLQ", - "protein_translation_length": 273, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111103" - ], - [ - "gene_synonym", - "EcoGene:EG13339" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75678" - ], - [ - "gene_synonym", - "NP_414787.4" - ], - [ - "gene_synonym", - "JW0243" - ], - [ - "gene_synonym", - "ykfA" - ], - [ - "gene_synonym", - "b0253" - ], - [ - "gene_synonym", - "ASAP:ABE-0000858" - ], - [ - "gene_synonym", - "ECK0255" - ], - [ - "gene_synonym", - "GeneID:949004" - ] - ], - "dna_sequence": "ATGAATAATTCTGAAGGTTTGAAGTCGTTTCAGCAATCGCTTGCTGATCTGCCGCAATGGGTATCAGAGCGGCTTCTGCAGCAAATTAACCAGTTAACTAACTACGAGCCAGTGATCGGCATTATGGGTAAAACCGGTGTTGGGAAGAGCAGTCTGTGCAATGCCCTGTTTGCCGGAGATATATCACCGGTCAGCGATGTGGCGGCCTGTACACGTGAGCCACTGCGCTTTCGCCTGCAAGTCGGCGACCGCTATATAACGCTGATGGATCTGCCCGGCGTGGGCGAAAGTGGCGCTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAGCTTCCTCGCCTCGACCTGGTACTGTGGCTGATTAAGGCCGATGACCGGGCGCTGACGGTGGATGAACATTTTTATCATCAGGTGATTGGAGAGGTATACCGGCATAAGGTGCTGTTTGTTATCAGCCAGTCGGATAAGGCCGAACCTACCAGCGGTGGGGGACAGTTGTCCACGGCGCAGAAGCAGAATATCAGCCGCAAAATCTGCCTGCTGCATGAGCTGTTCCAGCCCGTCCATCCGGTGTGTGCTGTGTCGGTCCGTCTACAATGGGGGCTTAAGGTGATGGCCGAGCGGATGATTAAGTGCCTGCCACGTGAGGCCACCAGCCCGGTGGTGTCGCAACTCCATCCTTCCTTTCGCACGACGGTAGTCCGGGAACAGGCTCGTAGCGATTTTGGTGAAACCGTCGGGGCCGTACTCGATAGCATCAGTGCCTTTCCCCTGATACCCGCCCCGGTGCGGGCCGTCATTCAGGCCGTGCGCACCACGGTGGTGTCAGTGGCCCGCGCCGTCTGGGATTTCTTCTTCTGA", - "dna_sequence_length": 864, - "functions": [ - "CP4-6 prophage", - "putative GTP-binding protein" - ], - "id": "CDS_247", - "location": [ - [ - "NC_000913", - 268960, - "-", - 864 - ] - ], - "md5": "896e5a9780cd86ddb7e7bf64a6c52c02", - "parent_gene": "", - "protein_md5": "0c864ca945765d649803c06dbd7c2786", - "protein_translation": "MNNSEGLKSFQQSLADLPQWVSERLLQQINQLTNYEPVIGIMGKTGVGKSSLCNALFAGDISPVSDVAACTREPLRFRLQVGDRYITLMDLPGVGESGARDTEYAALYREQLPRLDLVLWLIKADDRALTVDEHFYHQVIGEVYRHKVLFVISQSDKAEPTSGGGQLSTAQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLKVMAERMIKCLPREATSPVVSQLHPSFRTTVVREQARSDFGETVGAVLDSISAFPLIPAPVRAVIQAVRTTVVSVARAVWDFFF", - "protein_translation_length": 287, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q57083" - ], - [ - "gene_synonym", - "ECK0256" - ], - [ - "gene_synonym", - "GeneID:945417" - ], - [ - "gene_synonym", - "perR" - ], - [ - "gene_synonym", - "ASAP:ABE-0000862" - ], - [ - "gene_synonym", - "JW0244" - ], - [ - "gene_synonym", - "EcoGene:EG13340" - ], - [ - "gene_synonym", - "NP_414788.1" - ], - [ - "gene_synonym", - "b0254" - ], - [ - "gene_synonym", - "GI:16128239" - ] - ], - "dna_sequence": "ATGAAGCTCTTAGCAAAAGCACCTCTAAATCTGTTACGCGCCTTTGAAGCGGCTGGTCGTACCGGAGCTTTTGCGTTGGCCGCCTCTGAGTTGGAACTGTCACCCAGTGCGATCAGCCATGCCATCCGCAAACTGGAAAACTTGCTTGATGTACGCCTTTTTCAGCGCAGTACGCGAGAAATTACGCTGACGAAAGAAGGTGAAATACTGCTTGAGCACATACAGCGGGGATTTAACGAATTACAGCAGGGGTTGGCATTAGTGACGGCTGATGAATCCAGGCCTTTGCGCCTTCATACTGCACCGAGTTTTGCCCATCAATGGCTTTTACCACGTCTTGGTAAGTTCATACGTGAGAACCCAAGCATCGATCTGCGACTTTCAGCCAGCACAGAATATGCACGTTTTGAACAGGATGATTTTGATCTCGATATAGTCTACGGTGAACCCCGCCCATCACCCTATGAGAAGATCCCGCTTGCTGTTGAAGAACTTACGCCACTGTGTTCTCCCCAACTGGCTGAGCGGCTAAAGAAACCAGAGGATCTCTATGCGTTGACATTGATTCAGTGCGATGTGCAGTTGTACCAGTGGAAAGGATGGTTTGAGGCGAATAAGATGACGCCACCCAATAATTATGGCCTTCGATTTGACCGTAGCTTTATGGCGATTGCTGCCGCAGTTGACGGCTTGGGAGTTGTGCTTGAATCAAAACTACTGGCTGAACGTGAAATCGCTAGCGGTAAACTGGTATGCCCACTTGTAAACAGTACCAGCGAAATACATTACATCGGTCATTATTTGGTTTTCCCCCAGCACCAACACATGCATTCTGCGCTTGATGTGTTCAAAACCTGGCTACTGAATGAACTCAATCTGGGTAAAATTCGTTGA", - "dna_sequence_length": 894, - "functions": [ - "CP4-6 prophage", - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_248", - "location": [ - [ - "NC_000913", - 270182, - "-", - 894 - ] - ], - "md5": "a845e4499cc7a7cbd074e2b4b66e3697", - "parent_gene": "", - "protein_md5": "cc3107629bce64e85e26864682e7955a", - "protein_translation": "MKLLAKAPLNLLRAFEAAGRTGAFALAASELELSPSAISHAIRKLENLLDVRLFQRSTREITLTKEGEILLEHIQRGFNELQQGLALVTADESRPLRLHTAPSFAHQWLLPRLGKFIRENPSIDLRLSASTEYARFEQDDFDLDIVYGEPRPSPYEKIPLAVEELTPLCSPQLAERLKKPEDLYALTLIQCDVQLYQWKGWFEANKMTPPNNYGLRFDRSFMAIAAAVDGLGVVLESKLLAEREIASGKLVCPLVNSTSEIHYIGHYLVFPQHQHMHSALDVFKTWLLNELNLGKIR", - "protein_translation_length": 297, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4587" - ], - [ - "gene_synonym", - "insN1" - ], - [ - "gene_synonym", - "insN" - ], - [ - "gene_synonym", - "insO" - ], - [ - "gene_synonym", - "GeneID:5061501" - ], - [ - "gene_synonym", - "ASAP:ABE-0000867" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75679" - ], - [ - "gene_synonym", - "EcoGene:EG40014" - ], - [ - "gene_synonym", - "ORFAB" - ], - [ - "gene_synonym", - "ECK0257" - ] - ], - "dna_sequence": "ATGAAAAAAAGAAATTTCAGCGCAGAGTTTAAACGCGAATCCGCTCAACTGGTCGTTGACCAGAACTACACCGTGGCAGATGCAGCCAGCGCTATGGATGTCGGCCTTTCCACAATGACGCGATGGGTGAAACAATTACGTGATGAACGGCAGGGCAAAACACCAAAAGCCTCCCCCATTACCCCGGAACAAATTGAAATCCGTGAGCTCAGGAAAAAGCTACAACGTATTGAAATGGAAAATGAAATATTAAAAAAGCGCGCTCTTGATGTCAGACTCCCTGAACAGTTCTCGATAATCGGGAAACTCAGGGCGCGTTATCCTGTGGCCACTCTCTGCCATGTGTTCGGGGTTCATCGCAGCAGCTACAAATACTGGAAAAACCGTCCTGAAAAGCCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAACTGCATGGCATCAGCCACGGCTCTGCCGGAGCAAGAAGCATCGCCACAATGGCAACCCAGAGAGGATACCAGATGGGGCGCTGGCTTGCTGGCAGACTCATGAAAGAGCTGGGGCTGGTCAGTTGCCAGCAGCCGACTCACCGGTATAAGCGTGGCGGTCATGAGCACGTTGCTATCCCGAATCATCTTGAGCGACAGTTCGCCGTAACGGAACCAAATCAGGTGTGGTGCGGTGATGTGACCTAT", - "dna_sequence_length": 684, - "id": "CDS_249", - "location": [ - [ - "NC_000913", - 270278, - "+", - 258 - ], - [ - "NC_000913", - 271764, - "+", - 426 - ] - ], - "md5": "2f8f5fcde1303e3727b6f4173e6b1a53", - "parent_gene": "", - "protein_md5": "d9454a02231ba5f0a5424c14b01ca889", - "protein_translation": "MKKRNFSAEFKRESAQLVVDQNYTVADAASAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEILKKRALDVRLPEQFSIIGKLRARYPVATLCHVFGVHRSSYKYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATQRGYQMGRWLAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNHLERQFAVTEPNQVWCGDVTY", - "protein_translation_length": 228, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128241" - ], - [ - "gene_synonym", - "EcoGene:EG40009" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF88" - ], - [ - "gene_synonym", - "ECK0258" - ], - [ - "gene_synonym", - "insI1" - ], - [ - "gene_synonym", - "NP_414790.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000871" - ], - [ - "gene_synonym", - "b0256" - ], - [ - "gene_synonym", - "GeneID:949005" - ] - ], - "dna_sequence": "ATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGTTAAGGGATACTGGCGGCATAAAACCCCATGAGCGTAAGCGGGCTGTAGCTCACCTGACACTGTCTGAGCGCGAGGAGATACGAGCTGGTTTGTCAGCCAAAATGAGCATTCGTGCGATAGCTACTGCGCTGAATCGCAGTCCTTCGACGATCTCACGTGAAGTTCAGCGTAATCGGGGCAGACGCTATTACAAAGCTGTTGATGCTAATAACCGAGCCAACAGAATGGCGAAAAGGCCAAAACCGTGCTTACTGGATCAAAATTTACCATTGCGAAAGCTTGTTCTGGAAAAGCTGGAGATGAAATGGTCTCCAGAGCAAATATCAGGATGGTTAAGGCGAACAAAACCACGTCAAAAAACGCTGCGAATATCACCTGAGACAATTTATAAAACGCTGTACTTTCGTAGCCGTGAAGCGCTACACCACCTGAATATACAGCATCTGCGACGGTCGCATAGCCTTCGCCATGGCAGGCGTCATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTGGGGCATTGGGAGGGCGATTTAGTCTCAGGTACAAAAAACTCTCATATAGCCACACTTGTAGACCGAAAATCACGTTATACGATCATCGTTAGACTCAGGGGCAAAGATTCTGTCTCAGTAAATCAGGCTCTTACCGACAAATTCCTGAGTTTACCGTCAGAACTCAGAAAATCACTGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAATACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGA", - "dna_sequence_length": 1152, - "functions": [ - "IS30 transposase" - ], - "id": "CDS_250", - "location": [ - [ - "NC_000913", - 270603, - "+", - 1152 - ] - ], - "md5": "03b2d3a60045491f9481c10830f82a6f", - "parent_gene": "", - "protein_md5": "6fdab526a8f93608482b12881434c699", - "protein_translation": "MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRGRRYYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQKTLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEGDLVSGTKNSHIATLVDRKSRYTIIVRLRGKDSVSVNQALTDKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIRQYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD", - "protein_translation_length": 383, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5813" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47688" - ], - [ - "gene_synonym", - "ASAP:ABE-0000885" - ], - [ - "gene_synonym", - "b0258" - ], - [ - "gene_synonym", - "ykfC" - ], - [ - "gene_synonym", - "EcoGene:EG13341" - ], - [ - "gene_synonym", - "ECK0260" - ], - [ - "gene_synonym", - "GeneID:944940" - ] - ], - "dna_sequence": "TTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAGCTGCAAATCCTCAGGGATGAATTACTCTCAGGCCACTACCAGCCCTTGCCCGCCAGACGGGTTTACATCCCTAAAAGCAACGGCAAACTGCGACCACTGGGTATCCCCGCGTTGCGGGATCGTATTGTTCAGCGGGCCATGCTGATGGCGATGGAGCCGATATGGGAGAGTGATTTTCATACGCTCTCATATGGCTTCCGGCCTGAGCGCAGTGTCCACCACGCGATCCGCACGGTGAAATTACAGCTCACAGACTGTGGTGAAACCCGGGGACGCTGGGTGATTGAAGGCGACCTGTCCAGTTACTTCGACACCGTACATCATCGACTGCTGATGAAGGCTGTACGCCGCAGGATCAGTGACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGAGTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTGGAAACCCGCGGTGGCGTACTGCCGCTATGCCGATGATTTTGTCCTCATCGTCAAAGGCACCAAAGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAATCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGCAGGAGAAAGCCAGAAACTTCGCCGCATCGCTGACAGCACTGTTAT", - "dna_sequence_length": 1108, - "id": "CDS_251", - "location": [ - [ - "NC_000913", - 272847, - "+", - 1108 - ] - ], - "md5": "faff4b84ae5a5798edfb8fd64dee51f8", - "parent_gene": "", - "protein_md5": "d03a9ed7228bed9841dd72a3fe54dad5", - "protein_translation": "LIISEMQRKLATWAATDPSLRIQRLLRLITQPEWLAEAARITLSSKGAHTPGVDGVNKTMLQARLAVELQILRDELLSGHYQPLPARRVYIPKSNGKLRPLGIPALRDRIVQRAMLMAMEPIWESDFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGRWVIEGDLSSYFDTVHHRLLMKAVRRRISDARFMTLLWKTIKAGHIDVGLFRAASEGVPQGGVISPLLSNIMLNEFDQYLHERYLSGKARKDRWYWNNSIQRGRSTAVRENWQWKPAVAYCRYADDFVLIVKGTKAQVEAIREECRGVLEGSLKLRLNMDKTKIPHVNDGFIFLGHRLIRKRSRYGEMRVVSTIPQEKARNFAASLTALL", - "protein_translation_length": 369, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CE49" - ], - [ - "gene_synonym", - "NP_414793.1" - ], - [ - "gene_synonym", - "EcoGene:EG40008" - ], - [ - "gene_synonym", - "GI:16128244" - ], - [ - "gene_synonym", - "insH1" - ], - [ - "gene_synonym", - "b0259" - ], - [ - "gene_synonym", - "GeneID:944941" - ], - [ - "gene_synonym", - "ASAP:ABE-0000888" - ], - [ - "gene_synonym", - "ECK0261" - ] - ], - "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", - "dna_sequence_length": 1017, - "functions": [ - "IS5 transposase and trans-activator" - ], - "id": "CDS_252", - "location": [ - [ - "NC_000913", - 275117, - "-", - 1017 - ] - ], - "md5": "59571096a52db4971db033e04651ef59", - "parent_gene": "", - "protein_md5": "75d20978a034ac97cbf88235b32b7ad9", - "protein_translation": "MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", - "protein_translation_length": 338, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111105" - ], - [ - "gene_synonym", - "JW5027" - ], - [ - "gene_synonym", - "b0260" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47689" - ], - [ - "gene_synonym", - "NP_414794.4" - ], - [ - "gene_synonym", - "ykfD" - ], - [ - "gene_synonym", - "ASAP:ABE-0000893" - ], - [ - "gene_synonym", - "mmuP" - ], - [ - "gene_synonym", - "EcoGene:EG13342" - ], - [ - "gene_synonym", - "GeneID:946284" - ], - [ - "gene_synonym", - "ECK0262" - ] - ], - "dna_sequence": "ATGCAAACAACACAACAAAATGCGCCACTGAAGCGCACAATGAAAACGCGTCACCTGATTATGCTTTCCTTGGGCGGCGTGATTGGCACAGGATTATTCTTCAATACCGGGTACATCATTTCCACCACTGGAGCGGCGGGAACGCTGCTGGCCTATCTGATTGGTGCGCTGGTGGTCTGGCTGGTTATGCAGTGTCTGGGCGAGCTGTCGGTCGCGATGCCGGAGACCGGAGCGTTTCACGTTTATGCCGCGCGCTATCTTGGTCCGGCTACCGGGTATACCGTGGCCTGGCTTTACTGGCTGACCTGGACCGTGGCGCTGGGTTCGAGCTTTACCGCCGCTGGATTCTGTATGCAGTACTGGTTTCCACAGGTGCCGGTATGGGTCTGGTGCGTGGTGTTCTGCGCGATTATTTTTGGTCTGAATGTTATCTCCACGCGCTTTTTTGCCGAAGGGGAGTTCTGGTTCTCGCTGGTCAAAGTGGTCACTATCATCGCCTTTATCATCCTCGGTGGGGCGGCGATTTTCGGCTTTATTCCGATGCAGGATGGCTCGCCCGCGCCGGGGCTGAGTAATATCACGGCAGAAGGCTGGTTCCCGCACGGTGGCTTACCGATTTTGATGACTATGGTGGCAGTGAACTTTGCTTTTTCGGGTACCGAGCTTATCGGCATTGCCGCCGGTGAAACGGAAAACCCGCGCAAAGTTATCCCGGTAGCGATTCGTACTACCATCGCGCGACTGATTATTTTCTTTATCGGCACCGTGTTTGTGCTGGCAGCGCTGATCCCGATGCAGCAGGTGGGCGTGGAGAAAAGCCCGTTTGTGCTGGTATTTGAGAAAGTAGGGATCCCGTACGCCGCTGATATTTTTAACTTCGTGATCCTGACGGCTATTCTTTCTGCAGCGAACTCCGGGTTATATGCCTCCGGGCGCATGCTGTGGTCGTTGTCGAATGAACGTACGCTACCGGCCTGTTTTGCGCGAGTAACGAAAAACGGCGTGCCACTGACGGCGCTGTCGGTCAGTATGCTCGGTGGTGTGCTGGCGCTGTTTTCCAGCGTGGTGGCCCCGGACACGGTATTTGTTGCGCTGTCGGCAATCTCCGGGTTTGCGGTGGTAGCGGTGTGGCTGAGTATCTGCGCCTCGCATTTTGTTTTTCGTCGCCGTCATCTGCAACAAGGTAAGGCATTGAGTGAATTACATTATCGCGCGCCGTGGTATCCGCTGGTGCCAGTATTAGGTTTTGTGCTGTGCCTGGTGGCCTGTGTTGGGCTGGCATTCGATCCAGCGCAGAGAATTGCGTTGTGGTGCGGGTTACCGTTTGTTGCGTTGTGCTATGGTGCTTATTTCCTTACTCAACCCCGAAACGCAAAACAGGAGCCAGAACATGTCGCAGAATAA", 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"mmuM" - ], - [ - "gene_synonym", - "yagD" - ], - [ - "gene_synonym", - "GeneID:946143" - ], - [ - "gene_synonym", - "JW0253" - ], - [ - "gene_synonym", - "ASAP:ABE-0000895" - ], - [ - "gene_synonym", - "NP_414795.1" - ], - [ - "gene_synonym", - "EcoGene:EG13343" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47690" - ], - [ - "gene_synonym", - "ECK0263" - ] - ], - "dna_sequence": "ATGTCGCAGAATAATCCGTTACGCGCTCTTCTTGATAAACAGGATATCCTGCTGCTGGATGGCGCGATGGCGACGGAGCTGGAAGCGCGAGGGTGTAACTTAGCCGACAGCCTGTGGTCAGCCAAAGTGCTGGTAGAAAACCCGGAGCTTATCCGCGAAGTGCATCTTGATTACTACCGGGCGGGGGCGCAATGCGCGATCACTGCCAGCTATCAGGCGACGCCGGCGGGCTTCGCCGCGCGAGGTCTGGATGAAGCGCAGTCGAAAGCGCTGATTGGCAAAAGCGTGGAGCTGGCGCGTAAAGCCCGTGAAGCGTATCTGGCAGAGAACCCGCAGGCGGGAACGCTTCTGGTGGCGGGATCCGTCGGGCCTTACGGCGCGTATCTGGCGGATGGCTCTGAATACCGTGGCGATTATCATTGTAGCGTTGAGGCATTTCAGGCGTTTCATCGCCCGCGCGTGGAAGCCTTGCTGGATGCCGGGGCCGATCTGCTGGCCTGCGAAACCCTGCCGAATTTTTCCGAGATTGAGGCGTTGGCCGAGCTGTTGACCGCATATCCGCGTGCGCGGGCGTGGTTCTCATTTACCCTGCGCGACAGCGAACACCTGAGCGACGGTACGCCGCTGCGTGACGTGGTTGCGTTGCTGGCGGGTTATCCGCAGGTGGTGGCGCTAGGCATTAACTGTATTGCGCTGGAAAACACCACCGCTGCGTTGCAGCATTTACACGGTTTAACGGTGCTGCCGCTGGTGGTGTATCCGAACTCGGGCGAGCATTACGATGCCGTGAGCAAAACCTGGCATCATCACGGTGAACATTGCGCGCAGCTGGCGGATTATCTGCCGCAGTGGCAGGCCGCTGGCGCACGGTTGATTGGCGGGTGCTGTCGCACCACGCCTGCGGATATCGCCGCGTTAAAAGCGCGAAGCTGA", - "dna_sequence_length": 933, - "functions": [ - "CP4-6 prophage", - "S-methylmethionine:homocysteine methyltransferase" - ], - "id": "CDS_254", - "location": [ - [ - "NC_000913", - 276715, - "+", - 933 - ] - ], - "md5": "ff9548daad7d2175a549f82f17d905b1", - "parent_gene": "", - "protein_md5": "751787cd584546e973fc51dc472cdf67", - "protein_translation": "MSQNNPLRALLDKQDILLLDGAMATELEARGCNLADSLWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATPAGFAARGLDEAQSKALIGKSVELARKAREAYLAENPQAGTLLVAGSVGPYGAYLADGSEYRGDYHCSVEAFQAFHRPRVEALLDAGADLLACETLPNFSEIEALAELLTAYPRARAWFSFTLRDSEHLSDGTPLRDVVALLAGYPQVVALGINCIALENTTAALQHLHGLTVLPLVVYPNSGEHYDAVSKTWHHHGEHCAQLADYLPQWQAAGARLIGGCCRTTPADIAALKARS", - "protein_translation_length": 310, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111106" - ], - [ - "gene_synonym", - "b0262" - ], - [ - "gene_synonym", - "fbpC" - ], - [ - "gene_synonym", - "GeneID:947676" - ], - [ - "gene_synonym", - "afuC" - ], - [ - "gene_synonym", - "yagC" - ], - [ - "gene_synonym", - "EcoGene:EG12340" - ], - [ - "gene_synonym", - "JW0254" - ], - [ - "gene_synonym", - "ECK0264" - ], - [ - "gene_synonym", - "NP_414796.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37009" - ], - [ - "gene_synonym", - "ASAP:ABE-0000898" - ] - ], - "dna_sequence": "ATGACTCAGAAAAATTTCGTTGAACTGCGCAACGTCACTAAACGATTTGGCAGTAATACGGTAATCGACAATATCAACCTCACCATCCCGCAGGGGCAAATGGTGACGCTGCTCGGCCCGTCCGGCTGCGGCAAAACCACTATTTTGCGCCTGGTTGCCGGGCTGGAAAAACCGAGCGAAGGGCAAATTTTCATTGATGGCGAAGACGTCACCCATCGCTCTATTCAGCAGCGCGATATCTGTATGGTGTTTCAGTCCTATGCCCTGTTCCCGCATATGTCGCTGGGAGAGAATGTCGGTTATGGCCTGAAAATGCTCGGCGTACCGCGCGCAGAGCTGAAAGCCCGCGTCAAAGAGGCGTTGGCGATGGTGGATCTGGAAGGATTCGAAGACCGCTTTGTCGATCAGATCTCCGGCGGGCAGCAGCAGCGCGTGGCGCTGGCCCGCGCGCTGATCCTCAAGCCGAAAGTGCTGCTGTTTGATGAGCCGTTGAGTAACCTCGACGCCAACCTGCGTCGCAGCATGCGCGACAAGATCCGCGAGTTGCAAAAGCAGTTTGATATCACCTCGCTGTACGTCACCCACGATCAGAGCGAAGCCTTTGCGGTTTCTGATACTGTGCTGGTGATGAACAAGGGACACATCATGCAGATCGGCTCACCGCAGGATCTTTACCGCCAGCCCGCCTCCCGCTTTATGGCGAGCTTTATGGGCGATGCCAACCTGTTCCCGGCAACCTTCAGCGACGGATACGTTGATATCTACGGCTATCATCTGCCGCGCCCGCTGCACTTTGGTACACAGGGTGAAGGGATGGTCGGTGTGCGCCCGGAAGCGATCACGCTCAGCGATCGCGGCGAAGAGAGCCAGCGCTGCGTGATCCGCCATGTCGCCTATATGGGGCCGCAGTATGAAGTGACGGTGGAATGGCACGGGCAGGAGATATTATTGCAGGTCAACGCTACGCGTCTGCAACCGGACGTCGGCGAGCAGTATTATCTTGAAATCCATCCGTACGGCATGTTTGTTCTGGCGGATGCGGCATAA", 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"EcoGene:EG14277" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75681" - ], - [ - "gene_synonym", - "JW0255" - ], - [ - "gene_synonym", - "ECK0265" - ] - ], - "dna_sequence": "GGCCAAATCGATAAATCGCTCGATGAAGCCTCACTCAGCCTGCGCGCCGGTTCCCTGCGTACCATTACGCACATCCTGCTGCCGCTGCTGCGCCCGGCGATCCTCTCGGCGCTGATTTACAGCTTTGTGCGCGCCATTACCACCGTCAGCGCCATTGTGTTCCTCGTCACGCCGGATACCCGCGTAGCGACGGCTTACATCCTCAACCGCGTGGAAGATGGCGAATACGGTGTAGCGATTGCCTACGGTTCCATTCTGATCGTGGTGATGCTGGCGATTATTTTCATCTTTGACTGGCTGATCGGTGAATCACGTACCTCCCGTTCAAAAGCCAAAAACCAGGCGTAA", - "dna_sequence_length": 348, - "id": "CDS_256", - "location": [ - [ - "NC_000913", - 279161, - "-", - 348 - ] - ], - "md5": "dfa1a94e92aa1a9cc7293402c5629759", - "parent_gene": "", - "protein_md5": "898b16ebdaa7e7c864f7ed0dc95ecc0c", - "protein_translation": "GQIDKSLDEASLSLRAGSLRTITHILLPLLRPAILSALIYSFVRAITTVSAIVFLVTPDTRVATAYILNRVEDGEYGVAIAYGSILIVVMLAIIFIFDWLIGESRTSRSKAKNQA", - "protein_translation_length": 115, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0022" - ], - [ - "gene_synonym", - "b0264" - ], - [ - "gene_synonym", - "insB1" - ], - [ - "gene_synonym", - "GeneID:947698" - ], - [ - "gene_synonym", - "GI:16128249" - ], - [ - "gene_synonym", - "NP_414798.1" - ], - [ - "gene_synonym", - "EcoGene:EG40002" - ], - [ - "gene_synonym", - "ASAP:ABE-0000906" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF26" - ] - ], - "dna_sequence": "ATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGATACGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCAGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA", - "dna_sequence_length": 504, - "functions": [ - "IS1 transposase B" - ], - "id": "CDS_257", - "location": [ - [ - "NC_000913", - 279681, - "-", - 504 - ] - ], - "md5": "b3b6d14e187a3d92aafdf329f45ef694", - "parent_gene": "", - "protein_md5": "7d37bc43f614740314039784eef22b64", - "protein_translation": "MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVEQHDKVIGHYLNIKHYQ", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128250" - ], - [ - "gene_synonym", - "insA" - ], - [ - "gene_synonym", - "b0265" - ], - [ - "gene_synonym", - "NP_414799.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000909" - ], - [ - "gene_synonym", - "ECK4521" - ], - [ - "gene_synonym", - "GeneID:944946" - ], - [ - "gene_synonym", - "EcoGene:EG40001" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF08" - ] - ], - "dna_sequence": "GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAA", - "dna_sequence_length": 276, - "functions": [ - "IS1 repressor TnpA" - ], - "id": "CDS_258", - "location": [ - [ - "NC_000913", - 279875, - "-", - 276 - ] - ], - "md5": "41231158e2773380f006f003f3c4ba9f", - "parent_gene": "", - "protein_md5": "27f7da6e06bb874058543e01b3979d8b", - "protein_translation": "MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR", - "protein_translation_length": 91, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0258" - ], - [ - "gene_synonym", - "GeneID:14678508" - ], - [ - "gene_synonym", - "insI1" - ], - [ - "gene_synonym", - "b4708" - ], - [ - "gene_synonym", - "EcoGene:EG40009" - ] - ], - "dna_sequence": "GAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGA", - "dna_sequence_length": 174, - "id": "CDS_259", - "location": [ - [ - "NC_000913", - 279931, - "+", - 174 - ] - ], - "md5": "5a113b11391db364fe59dd48647c9e71", - "parent_gene": "", - "protein_md5": "39959f4597757652cfc67adedc60f792", - "protein_translation": "ENTNGLIRQYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD", - "protein_translation_length": 57, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:1450237" - ], - [ - "gene_synonym", - "ECK4473" - ], - [ - "gene_synonym", - "EcoGene:EG14418" - ], - [ - "gene_synonym", - "insX" - ], - [ - "gene_synonym", - "b4505" - ], - [ - "gene_synonym", - "ASAP:ABE-0285026" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q79E92" - ], - [ - "gene_synonym", - "ykgN" - ] - ], - "dna_sequence": "ATGAGCGGTAAGCGTTATCCCGAAGAGTTTAAAACTGAAGCAGTCAAACAGGTTGTTGATCTCGGTTATTCTGTTGCCAGCGTTGCAACACGTCTCGATATCACCACCCACAGCCTTTATGCCTGGATAAAGAAGTACGGTCCGGATTCTTCCACTAATAAAGAACAGTCAGATGCTCAGGCCGAGATCCGCCGTCTCCAGAAAGAGCTGAAACGGGTTACCGACGAACGGGACATATTAAAAAAAGCT", - "dna_sequence_length": 249, - "id": "CDS_260", - "location": [ - [ - "NC_000913", - 280362, - "-", - 249 - ] - ], - "md5": "4b174c88f160f2de2fc4bbbdc9598199", - "parent_gene": "", - "protein_md5": "c52520b0950e83f4df70e71cdff7d50a", - "protein_translation": "MSGKRYPEEFKTEAVKQVVDLGYSVASVATRLDITTHSLYAWIKKYGPDSSTNKEQSDAQAEIRRLQKELKRVTDERDILKKA", - "protein_translation_length": 83, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0000912" - ], - [ - "gene_synonym", - "b0266" - ], - [ - "gene_synonym", - "ECK0267" - ], - [ - "gene_synonym", - "JW0259" - ], - [ - "gene_synonym", - "yagB" - ], - [ - "gene_synonym", - "GeneID:944944" - ], - [ - "gene_synonym", - "EcoGene:EG12339" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37008" - ] - ], - "dna_sequence": "ATGAATAAAGACTCTACTCAAACTTGGGGGCTTAAACGAGATATCACACCGTGTTTCGGAGCACGACTGGTGCAGGAAGGTCATCGTCTGCATTTTCTGGCTGACCGGGCTGGATTCACCGGCTCATTCAGTGAGGTGCAGACTCTACAACTGGATGAAGCCTTCCCGCATTTTGTCGCACATCTGGAGCTGATGCTGCTCTCCTGTGAGCTGAATCCCAGGTACGCGCACTGTGTCACACTGTACCGTAACGGGCTGACTGGTGAAGCCGATACGCTGGGCAGTCATGGGTATGTATATATCGCAATT", - "dna_sequence_length": 309, - "id": "CDS_261", - "location": [ - [ - "NC_000913", - 280735, - "-", - 309 - ] - ], - "md5": "c1ff00fcea0fb26fc838caefcfec5356", - "parent_gene": "", - "protein_md5": "a76d7eea67e964759f2f1f440897fb8a", - "protein_translation": "MNKDSTQTWGLKRDITPCFGARLVQEGHRLHFLADRAGFTGSFSEVQTLQLDEAFPHFVAHLELMLLSCELNPRYAHCVTLYRNGLTGEADTLGSHGYVYIAI", - "protein_translation_length": 103, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0267" - ], - [ - "gene_synonym", - "GI:16128252" - ], - [ - "gene_synonym", - "ASAP:ABE-0000915" - ], - [ - "gene_synonym", - "GeneID:944937" - ], - [ - "gene_synonym", - "NP_414801.1" - ], - [ - "gene_synonym", - "yagA" - ], - [ - "gene_synonym", - "EcoGene:EG12338" - ], - [ - "gene_synonym", - "ECK0268" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37007" - ], - [ - "gene_synonym", - "JW0260" - ] - ], - "dna_sequence": "ATGGAGTCGCTTATGCCCTGGGATGCGAGAGATACCATGTCATTACGTACTGAGTTTGTTTTGTTCGCCTCGCAGGACGGGGCGAACATCCGTTCCCTCTGCCGTCGCTTCGGCATTTCACCTGCCACCGGCTACAAGTGGCTCCAGCGCTGGGCTCAGGAAGGTGCCGCCGGTCTTCAGGACCGCCCGCGCATTCCGCACCATTCCCCGAACCGCTCATCTGACGACATCACGGCCCTGCTGCGTATGGCCCATGACCGTCATGAACGCTGGGGAGCCCGCAAGATTAAGCGCTGGCTCGAGGACCAGGGGCACACCATGCCCGCCTTCAGCACCGTCCATAACCTGATGGCCCGCCATGGCCTGCTGCCGGGCGCTTCACCGGGCATTCCCGCCACGGGCCGGTTCGAACACGACGCGCCGAACCGCCTCTGGCAGATGGATTTTAAGGGCCACTTTCCTTTTGGCGGTGGACGCTGCCATCCGCTCACCCTGCTGGACGACCACTCCCGTTTTTCCCTGTGCCTGGCGCACTGTACCGATGAACGGCGCGAGACCGTGCAGCAGCAGCTGGTCAGCGTGTTTGAGCGTTACGGCCTGCCGGACCGGATGACCATGGATAACGGCTCACCGTGGGGCGACACCACCGGCACCTGGACGGCGCTGGAGCTGTGGCTGATGCGCCTGGGTATCCGGGTGGGGCACTCCCGGCCTTATCATCCGCAGACGCAGGGGAAGCTGGAGCGTTTTCACCGCAGCCTGAAGGCGGAAGTGCTGCAGGGAAAATGGTTCGCAGACAGCGGTGAACTGCAGCGCGCCTTCGACCACTGGCGGACGGTCTATAACCTTGAACGCCCGCACGAGGCGCTGGATATGGCGGTACCGGGCTCGCGGTATCAGCCGTCAGCGCGGCAGTACAGCGGCAACACAACGCCCCCGGAATACGATGAAGGGGTGATGGTCAGGAAAGTGGATATCAGCGGAAAGCTGAGCGTGAAAGGGGTAAGTCTGAGCGCAGGCAAGGCGTTCAGGGGAGAACGGGTCGGGCTGAAGGAGATGCAGGAAGACGGCAGCTACGAGGTGTGGTGGTACAGCACGAAAGTGGGGGTGATCGACCTGAAGAAAAAGTCGATCACCATGGGTAAAGGATGTTAA", - "dna_sequence_length": 1155, - "functions": [ - "CP4-6 prophage", - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_262", - "location": [ - [ - "NC_000913", - 281983, - "-", - 1155 - ] - ], - "md5": "64e0e06ae1438a7c6031ce7d282b0c85", - "parent_gene": "", - "protein_md5": "b4d61c8451a847737f2083173925d977", - "protein_translation": "MESLMPWDARDTMSLRTEFVLFASQDGANIRSLCRRFGISPATGYKWLQRWAQEGAAGLQDRPRIPHHSPNRSSDDITALLRMAHDRHERWGARKIKRWLEDQGHTMPAFSTVHNLMARHGLLPGASPGIPATGRFEHDAPNRLWQMDFKGHFPFGGGRCHPLTLLDDHSRFSLCLAHCTDERRETVQQQLVSVFERYGLPDRMTMDNGSPWGDTTGTWTALELWLMRLGIRVGHSRPYHPQTQGKLERFHRSLKAEVLQGKWFADSGELQRAFDHWRTVYNLERPHEALDMAVPGSRYQPSARQYSGNTTPPEYDEGVMVRKVDISGKLSVKGVSLSAGKAFRGERVGLKEMQEDGSYEVWWYSTKVGVIDLKKKSITMGKGC", - "protein_translation_length": 384, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944925" - ], - [ - "gene_synonym", - "yagE" - ], - [ - "gene_synonym", - "b0268" - ], - [ - "gene_synonym", - "NP_414802.2" - ], - [ - "gene_synonym", - "ECK0269" - ], - [ - "gene_synonym", - "ASAP:ABE-0000921" - ], - [ - "gene_synonym", - "JW0261" - ], - [ - "gene_synonym", - "EcoGene:EG13344" - ], - [ - "gene_synonym", - "GI:345452715" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75682" - ] - ], - "dna_sequence": "ATGCCGCAGTCCGCGTTGTTCACGGGAATCATTCCCCCTGTCTCCACCATTTTTACCGCCGACGGCCAGCTCGATAAGCCGGGCACCGCCGCGCTGATCGACGATCTGATCAAAGCAGGCGTTGACGGCCTGTTCTTCCTGGGCAGCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCCTACTACTGGAAAGTGTCGGAAGCGAACCTGATCCGCTATTTCGAGCAGGTGGCCGACAGCGTCACGCTGCCGGTGATGCTCTATAACTTCCCGGCGCTGACCGGGCAGGATCTGACTCCGGCGCTGGTGAAAACCCTCGCCGACTCGCGCAGCAATATTATCGGCATCAAAGACACCATCGACTCCGTCGCCCACCTGCGCAGCATGATCCATACCGTCAAAGGTGCCCATCCGCACTTCACCGTGCTCTGCGGCTACGACGATCATCTGTTCAATACCCTGCTGCTCGGCGGCGACGGGGCGATATCGGCGAGCGGCAACTTTGCCCCGCAGGTGTCGGTGAATCTTCTGAAAGCCTGGCGCGACGGGGACGTGGCGAAAGCGGCCGGGTATCATCAGACCTTGCTGCAAATTCCGCAGATGTATCAGCTGGATACGCCGTTTGTGAACGTGATTAAAGAGGCGATCGTGCTCTGCGGTCGTCCTGTCTCCACGCACGTGCTGCCGCCCGCCTCGCCGCTGGACGAGCCGCGCAAGGCGCAGCTGAAAACCCTGCTGCAACAGCTCAAGCTTTGCTGA", - "dna_sequence_length": 909, - "functions": [ - "2-keto-3-deoxy gluconate (KDG) aldolase", - "CP4-6 prophage" - ], - "id": "CDS_263", - "location": [ - [ - "NC_000913", - 282278, - "+", - 909 - ] - ], - "md5": "22b1f2814cf9993af0cb192a63c980f0", - "parent_gene": "", - "protein_md5": "4d146da1ce0f66d28ce9ad1e71d74b1f", - "protein_translation": "MPQSALFTGIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLRSMIHTVKGAHPHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQIPQMYQLDTPFVNVIKEAIVLCGRPVSTHVLPPASPLDEPRKAQLKTLLQQLKLC", - "protein_translation_length": 302, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77596" - ], - [ - "gene_synonym", - "GI:16128254" - ], - [ - "gene_synonym", - "yagF" - ], - [ - "gene_synonym", - "b0269" - ], - [ - "gene_synonym", - "GeneID:944928" - ], - [ - "gene_synonym", - "EcoGene:EG13345" - ], - [ - "gene_synonym", - "JW0262" - ], - [ - "gene_synonym", - "ECK0270" - ], - [ - "gene_synonym", - "ASAP:ABE-0000923" - ], - [ - "gene_synonym", - "NP_414803.1" - ] - ], - "dna_sequence": "ATGACCATTGAGAAAATTTTCACCCCGCAGGACGACGCGTTTTATGCGGTGATCACCCACGCGGCGGGGCCGCAGGGCGCTCTGCCGCTGACCCCGCAGATGCTGATGGAATCTCCCAGCGGCAACCTGTTCGGCATGACGCAGAACGCCGGGATGGGCTGGGACGCCAACAAGCTCACCGGCAAAGAGGTGCTGATTATCGGCACTCAGGGCGGCATCCGCGCCGGAGACGGACGCCCAATCGCGCTGGGCTACCACACCGGGCATTGGGAGATCGGCATGCAGATGCAGGCGGCGGCGAAGGAGATCACCCGCAATGGCGGGATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACGCGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCGCCACCATGATTGCGCTGGCCGCGATGCACGACCTGCCGACTATTCTGGTGCCGGGCGGGGCGACGCTGCCGCCGACCGTCGGGGAAGACGCGGGCAAGGTGCAGACCATCGGCGCGCGTTTCGCCAACCACGAACTCTCCCTGCAGGAGGCCGCCGAACTGGGCTGTCGCGCCTGCGCCTCGCCGGGCGGCGGGTGTCAGTTCCTCGGCACGGCGGGCACCTCGCAGGTGGTCGCGGAGGCGCTGGGTCTGGCGCTGCCGCACTCCGCGCTGGCGCCGTCCGGGCAGGCGGTGTGGCTGGAGATCGCCCGCCAGTCGGCGCGCGCGGTCAGCGAGCTGGATAGCCGCGGCATCACCACGCGGGATATCCTCTCCGATAAAGCCATCGAAAACGCGATGGTGATCCACGCGGCGTTCGGCGGCTCCACCAATTTACTGCTGCACATTCCGGCCATCGCCCACGCGGCGGGCTGCACGATCCCGGACGTTGAGCACTGGACGCGCATCAACCGTAAAGTGCCGCGTCTGGTGAGCGTGCTGCCCAACGGCCCGGACTATCACCCGACCGTGCGCGCCTTCCTCGCGGGCGGCGTGCCGGAGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTGGGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCGGATGACGTGATCCTGCCGCCGGAGAAGGCAAAAGCGAAAGGGCTGACCTCGACGGTCTGCTTCCCGACGGGCAACATCGCTCCGGAAGGTTCGGTGATCAAGGCCACGGCGATCGACCCGTCGGTGGTGGGCGAAGATGGCGTATACCACCACACCGGCCGGGTGCGGGTGTTTGTCTCGGAAGCGCAGGCGATCAAGGCGATCAAGCGGGAAGAGATTGTGCAGGGCGATATCATGGTGGTGATCGGCGGCGGGCCGTCCGGCACCGGCATGGAAGAGACCTACCAGCTCACCTCCGCGCTAAAGCATATCTCGTGGGGCAAGACGGTGTCGCTCATCACCGATGCGCGCTTCTCGGGCGTGTCGACGGGCGCCTGCTTCGGCCACGTGTCGCCGGAGGCGCTGGCGGGCGGGCCGATTGGCAAGCTGCGCGATAACGACATCATCGAGATTGCCGTGGATCGTCTGACGTTAACTGGCAGCGTGAACTTCATCGGCACCGCGGACAACCCGCTGACGCCGGAAGAGGGCGCGCGCGAGCTGGCGCGGCGGCAGACGCACCCGGACCTGCACGCCCACGACTTTTTGCCGGACGACACCCGGCTGTGGGCGGCACTGCAGTCGGTGAGCGGCGGCACCTGGAAAGGCTGTATTTATGACACCGATAAAATTATCGAGGTAATTAACGCCGGTAAAAAAGCGCTCGGAATTTAA", - "dna_sequence_length": 1968, - "functions": [ - "CP4-6 prophage", - "dehydratase family protein" - ], - "id": "CDS_264", - "location": [ - [ - "NC_000913", - 283201, - "+", - 1968 - ] - ], - "md5": "dd03d846fcd59c6c4163626360705a38", - "parent_gene": "", - "protein_md5": "cc43aab40ad953046e929249fcb677d2", - "protein_translation": "MTIEKIFTPQDDAFYAVITHAAGPQGALPLTPQMLMESPSGNLFGMTQNAGMGWDANKLTGKEVLIIGTQGGIRAGDGRPIALGYHTGHWEIGMQMQAAAKEITRNGGIPFAAFVSDPCDGRSQGTHGMFDSLPYRNDAAIVFRRLIRSLPTRRAVIGVATCDKGLPATMIALAAMHDLPTILVPGGATLPPTVGEDAGKVQTIGARFANHELSLQEAAELGCRACASPGGGCQFLGTAGTSQVVAEALGLALPHSALAPSGQAVWLEIARQSARAVSELDSRGITTRDILSDKAIENAMVIHAAFGGSTNLLLHIPAIAHAAGCTIPDVEHWTRINRKVPRLVSVLPNGPDYHPTVRAFLAGGVPEVMLHLRDLGLLHLDAMTVTGQTVGENLEWWQASERRARFRQCLREQDGVEPDDVILPPEKAKAKGLTSTVCFPTGNIAPEGSVIKATAIDPSVVGEDGVYHHTGRVRVFVSEAQAIKAIKREEIVQGDIMVVIGGGPSGTGMEETYQLTSALKHISWGKTVSLITDARFSGVSTGACFGHVSPEALAGGPIGKLRDNDIIEIAVDRLTLTGSVNFIGTADNPLTPEEGARELARRQTHPDLHAHDFLPDDTRLWAALQSVSGGTWKGCIYDTDKIIEVINAGKKALGI", - "protein_translation_length": 655, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0270" - ], - [ - "gene_synonym", - "GI:16128255" - ], - [ - "gene_synonym", - "yagG" - ], - [ - "gene_synonym", - "NP_414804.1" - ], - [ - "gene_synonym", - "GeneID:944947" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75683" - ], - [ - "gene_synonym", - "ASAP:ABE-0000929" - ], - [ - "gene_synonym", - "JW0263" - ], - [ - "gene_synonym", - "EcoGene:EG13346" - ], - [ - "gene_synonym", - "ECK0271" - ] - ], - "dna_sequence": "ATGACGCAATTAACCATGAAAGACAAAATTGGCTACGGGCTGGGAGACACCGCCTGCGGCTTCGTCTGGCAGGCCACGATGTTCCTGCTGGCCTATTTCTACACCGACGTCTTCGGCCTGTCGGCGGGGATTATGGGCACGCTGTTTTTGGTCTCCCGCGTGCTCGACGCCGTCACCGACCCGCTGATGGGGCTGCTGGTAGACCGCACCCGCACGCGGCACGGCCAGTTCCGCCCGTTCCTGCTGTGGGGGGCCATCCCGTTCGGCATCGTCTGCGTGCTGACCTTCTACACGCCGGACTTCTCCGCACAGGGCAAGATCATCTACGCCTGCGTGACCTACATTCTCCTGACCCTGGTCTACACCTTCGTTAACGTGCCGTACTGCGCCATGCCGGGCGTCATCACCGCCGACCCGAAAGAGCGTCACGCCCTGCAGTCCTGGCGCTTCTTCCTGGCGGCGGCGGGCTCGCTCGCTATCAGCGGCATCGCGCTGCCGCTGGTGAGCATCATCGGCAAAGGGGACGAGCAGGTGGGCTACTTCGGCGCCATGTGCGTGCTGGGGCTGAGCGGCGTGGTGCTGCTCTACGTCTGCTTCTTCACGACCAAAGAGCGCTACACCTTTGAGGTGCAGCCGGGCTCGTCGGTGGCGAAAGACCTTAAGCTGCTGCTGGGCAACAGCCAGTGGCGCATCATGTGCGCGTTCAAGATGATGGCGACCTGCTCCAACGTGGTGCGCGGCGGGGCGACGCTCTACTTCGTGAAATACGTGATGGATCACCCGGAGTTGGCGACCCAGTTTTTACTTTACGGCAGCCTCGCCACCATGTTCGGCTCGCTTTGCTCCTCACGCCTGCTGGGCCGCTTCGACCGCGTCACCGCCTTCAAGTGGATCATCGTCGCCTACTCGCTGATCAGCCTGCTGATTTTCGTCACCCCGGCGGAGCACATCGCGCTCATTTTTGCCCTCAACATCCTGTTCCTGTTCGTCTTTAATACCACCACGCCGCTGCAGTGGCTGATGGCTTCTGACGTGGTGGACTACGAGGAGAGCCGCAGCGGTCGCCGCCTCGACGGGCTGGTGTTCTCCACCTACCTGTTCAGCCTGAAGATTGGCCTGGCGATTGGCGGGGCGGTGGTGGGCTGGATCCTGGCGTACGTCAACTATTCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGCACCGCGCGGCGCAGGGCGAGGCCGTTCCCGACGCCGCGACAGCCGCATCCCATTAA", - "dna_sequence_length": 1383, - "functions": [ - "CP4-6 prophage", - "putative sugar transporter" - ], - "id": "CDS_265", - "location": [ - [ - "NC_000913", - 285395, - "+", - 1383 - ] - ], - "md5": "f95a18693eb84084856811d738877250", - "parent_gene": "", - "protein_md5": "734734bacea304a02153e52c3e38f2a2", - "protein_translation": "MTQLTMKDKIGYGLGDTACGFVWQATMFLLAYFYTDVFGLSAGIMGTLFLVSRVLDAVTDPLMGLLVDRTRTRHGQFRPFLLWGAIPFGIVCVLTFYTPDFSAQGKIIYACVTYILLTLVYTFVNVPYCAMPGVITADPKERHALQSWRFFLAAAGSLAISGIALPLVSIIGKGDEQVGYFGAMCVLGLSGVVLLYVCFFTTKERYTFEVQPGSSVAKDLKLLLGNSQWRIMCAFKMMATCSNVVRGGATLYFVKYVMDHPELATQFLLYGSLATMFGSLCSSRLLGRFDRVTAFKWIIVAYSLISLLIFVTPAEHIALIFALNILFLFVFNTTTPLQWLMASDVVDYEESRSGRRLDGLVFSTYLFSLKIGLAIGGAVVGWILAYVNYSASSSVQPVEVLTTIKILFCVVPVVLYAGMFIMLSLYKLTDARVEAISRQLIKHRAAQGEAVPDAATAASH", - "protein_translation_length": 460, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0271" - ], - [ - "gene_synonym", - "EcoGene:EG13347" - ], - [ - "gene_synonym", - "GI:16128256" - ], - [ - "gene_synonym", - "yagH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77713" - ], - [ - "gene_synonym", - "NP_414805.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000931" - ], - [ - "gene_synonym", - "GeneID:944949" - ], - [ - "gene_synonym", - "ECK0272" - ], - [ - "gene_synonym", - "JW0264" - ] - ], - "dna_sequence": "ATGGAAATCACTAACCCGATACTCACCGGCTTCAACCCGGACCCGTCCCTGTGCCGCCAGGGCGAGGACTACTACATCGCCACCTCGACCTTCGAGTGGTTCCCGGGCGTGCGCATCTACCACTCCCGTGACCTGAAAAACTGGTCGCTGGTCAGCACCCCGTTGGACCGCGTGTCGATGCTGGACATGAAGGGCAACCCGGACTCCGGCGGCATCTGGGCGCCGTGCCTGAGCTACGCCGACGGTAAATTCTGGCTGCTCTACACCGACGTGAAGATTGTCGACTCGCCGTGGAAAAACGGCCGCAACTTCCTCGTCACCGCGCCCTCCATCGAGGGGCCATGGAGCGAGCCAATCCCGATGGGCAACGGCGGGTTTGACCCGTCCCTGTTCCACGACGACGATGGCCGCAAATACTATATCTACCGCCCGTGGGGGCCGCGCCACCACAGCAACCCGCACAACACCATCGTGTTACAGGCGTTTGACCCGCAGACCGGCACGCTCTCGCCCGAGCGCAAAACGCTGTTTACCGGCACGCCGCTCTGCTACACCGAAGGCGCGCACCTGTATCGCCACGCGGGATGGTACTACCTGATGGCCGCCGAGGGCGGCACCAGCTACGAGCACGCCGTCGTGGTGCTGCGTTCCAAAAATATCGACGGGCCGTACGAGCTGCACCCGGACGTAACGATGATGACCAGCTGGCACCTGCCGGAGAACCCGCTGCAGAAGAGCGGCCACGGCTCGCTGCTGCAGACGCATACGGGTGAATGGTACATGGCCTACCTCACCAGCCGCCCGCTGCGCCTGCCCGGCGTGCCGCTGCTGGCCTCCGGCGGACGCGGCTACTGCCCGCTGGGGCGCGAGACCGGCATCGCCCGCATTGAATGGCGCGACGGCTGGCCGTACGTGGAAGGCGGCAAGCACGCGCAGCTGACCGTGAAAGGCCCGCAAGTAGCCGAGCAGCCTGCAGCCGTTCCGGGCAACTGGCGGGACGATTTCGACGCCAGTTCGCTTGACCCGGAGCTGCAGACCCTGCGCATTCCGTTCGACGACACCCTCGGCTCGCTCACCGCGCGCCCGGGCTTCTTACGGCTCTATGGCAACGACTCGCTCAATTCGACCTTCACCCAATCGACCGTGGCGCGCCGCTGGCAGCACTTCGCCTTCCGGGCAGAAACGCGGATGGAGTTCTCGCCGGTGCACTTCCAGCAGAGCGCGGGGCTGACCTGCTACTACAACAGCAAAAACTGGAGCTACTGCTTTGTGGACTACGAGGAGGGACAGGGTAGAACCATCAAAGTTATCCAGCTCGACCACAACGTGCCGTCGTGGCCGCTGCACGAGCAGCCCATTCCGGTGCCGGAACATGCGGAGAGCGTCTGGCTGCGGGTGGACGTGGATACGCTGGTCTACCGCTACAGCTACTCGTTTGATGGCGAGACGTGGCACACCGTGCCGGTGACGTATGAGGCGTGGAAGCTGTCGGACGACTACATCGGCGGGCGCGGCTTCTTCACCGGCGCGTTTGTGGGCCTGCACTGCGAGGACATCAGCGGCGACGGCTGCTACGCGGACTTCGACTACTTCACCTACGAGCCGGTCTAA", - "dna_sequence_length": 1611, - "functions": [ - "CP4-6 prophage", - "putative xylosidase/arabinosidase" - ], - "id": "CDS_266", - "location": [ - [ - "NC_000913", - 286789, - "+", - 1611 - ] - ], - "md5": "870c28b57cf4c834ab186c6e93e899b0", - "parent_gene": "", - "protein_md5": "481f72f8536242029e9c5cab2d79ffc8", - "protein_translation": "MEITNPILTGFNPDPSLCRQGEDYYIATSTFEWFPGVRIYHSRDLKNWSLVSTPLDRVSMLDMKGNPDSGGIWAPCLSYADGKFWLLYTDVKIVDSPWKNGRNFLVTAPSIEGPWSEPIPMGNGGFDPSLFHDDDGRKYYIYRPWGPRHHSNPHNTIVLQAFDPQTGTLSPERKTLFTGTPLCYTEGAHLYRHAGWYYLMAAEGGTSYEHAVVVLRSKNIDGPYELHPDVTMMTSWHLPENPLQKSGHGSLLQTHTGEWYMAYLTSRPLRLPGVPLLASGGRGYCPLGRETGIARIEWRDGWPYVEGGKHAQLTVKGPQVAEQPAAVPGNWRDDFDASSLDPELQTLRIPFDDTLGSLTARPGFLRLYGNDSLNSTFTQSTVARRWQHFAFRAETRMEFSPVHFQQSAGLTCYYNSKNWSYCFVDYEEGQGRTIKVIQLDHNVPSWPLHEQPIPVPEHAESVWLRVDVDTLVYRYSYSFDGETWHTVPVTYEAWKLSDDYIGGRGFFTGAFVGLHCEDISGDGCYADFDYFTYEPV", - "protein_translation_length": 536, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0272" - ], - [ - "gene_synonym", - "yagI" - ], - [ - "gene_synonym", - "GI:16128257" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77300" - ], - [ - "gene_synonym", - "EcoGene:EG13349" - ], - [ - "gene_synonym", - "NP_414806.1" - ], - [ - "gene_synonym", - "GeneID:945016" - ], - [ - "gene_synonym", - "ECK0273" - ], - [ - "gene_synonym", - "JW0265" - ], - [ - "gene_synonym", - "ASAP:ABE-0000933" - ] - ], - "dna_sequence": "ATGCCGATTATTCAGTCTGTTGAACGTGCGTTGCAGATCCTCGACCTGTTCAACGAGCAGGCCACCGAGCTTAAGATCACCGACATCAGCAAACTGATGGGGCTGAGCAAGAGTACCCTCCACTCGCTGCTAAAAACCCTGCAGCTTCACGGCTATATCGATCAGAACCCGGAGAACGGCAAGTATCGCCTCGGCATGAAGCTGGTCGAGCGCGGCCATTTTGTCGTGGGCTCCATCGATATTCGGCAGAAGGCAAAAGGCTGGCTGACGGAGCTGTCCCGGCGGACCGGGCAGACCACCCATCTGGGGATCCTGGACGGGCGTGAAGGGGTCTATATCGAGAAGATTGAAGGCAAGCTGGCCGCCATCGCCTATTCACGCATCGGCCGCCGCCTGCCGGTGCACGCCACCGCCATCGGCAAGGTGTTGATTGCCTGGCTGGGCGAGGCCGAGCTGAACGCCCTGCTGGAGGGCTATCAGTACACTACCTTTACGCCCGCCACCCTCGCGTCTCGCGAAGCCTTAATGAGCGCCCTGGCGCAGACCCGCGAGCAAGGCTACGCCCTGGACAGCGAAGAGAACGAGCAGGGCGTGCGCTGCGTGGCGGTGCCGGTGTGGAACCACGAGTCCCGCGTCATCGCCGCCCTGAGCCTGTCGACGCTGACCTCCCGCGTGGACGACGCGGAGCTGGCTAATTTCCGCGAGCAGCTTCAGCAGGCCGGGCTCGCGCTCTCGCGCGCGCTGGGCTACCCGGCCTGA", - "dna_sequence_length": 759, - "functions": [ - "CP4-6 prophage", - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_267", - "location": [ - [ - "NC_000913", - 289162, - "-", - 759 - ] - ], - "md5": "c1da6a7bdffbc7cef17e117bab483152", - "parent_gene": "", - "protein_md5": "4f66db19180d454d04bf08c00c68855d", - "protein_translation": "MPIIQSVERALQILDLFNEQATELKITDISKLMGLSKSTLHSLLKTLQLHGYIDQNPENGKYRLGMKLVERGHFVVGSIDIRQKAKGWLTELSRRTGQTTHLGILDGREGVYIEKIEGKLAAIAYSRIGRRLPVHATAIGKVLIAWLGEAELNALLEGYQYTTFTPATLASREALMSALAQTREQGYALDSEENEQGVRCVAVPVWNHESRVIAALSLSTLTSRVDDAELANFREQLQQAGLALSRALGYPA", - "protein_translation_length": 252, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06960" - ], - [ - "gene_synonym", - "b0273" - ], - [ - "gene_synonym", - "GI:16128258" - ], - [ - "gene_synonym", - "Arg5" - ], - [ - "gene_synonym", - "GeneID:944844" - ], - [ - "gene_synonym", - "NP_414807.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000939" - ], - [ - "gene_synonym", - "EcoGene:EG10067" - ], - [ - "gene_synonym", - "ECK0274" - ], - [ - "gene_synonym", - "argD" - ], - [ - "gene_synonym", - "JW0266" - ], - [ - "gene_synonym", - "argF" - ] - ], - "dna_sequence": "ATGTCCGATTTATACAAAAAACACTTTCTGAAACTGCTCGACTTTACCCCTGCACAGTTCACTTCTCTGCTGACCCTTGCCGCACAGCTCAAAGCCGATAAAAAAAATGGCAAGGAAGTACAGAAGCTTACCGGTAAAAACATCGCGCTCATCTTCGAAAAAGACTCGACTCGTACCCGTTGCTCTTTCGAAGTTGCCGCATTTGACCAGGGCGCGCGCGTTACCTATTTAGGGCCGAGCGGCAGCCAGATTGGGCATAAAGAGTCAATTAAGGACACCGCGCGGGTTCTCGGGCGGATGTATGACGGCATTCAGTATCGCGGTCACGGCCAGGAAGTGGTCGAAACGCTGGCGCAGTATGCGGGCGTGCCGGTGTGGAACGGGCTGACCAACGAGTTCCACCCGACCCAGCTGCTGGCGGACCTGATGACCATGCAGGAGCACCTGCCGGGCAAGGCGTTTAACGAGATGACGCTGGTCTACGCGGGCGATGCGCGCAACAACATGGGCAACTCGATGCTGGAAGCGGCGGCGCTGACCGGGCTGGATCTGCGCCTGTTGGCCCCGAAAGCCTGCTGGCCGGAAGAGAGCCTGGTGGCGGAGTGCAGCGCGCTGGCGGAGAAGCACGGCGGGAAAATTACTCTGACGGAAGACGTGGCGGCAGGCGTTAAGGGCGCGGACTTTATCTATACCGACGTGTGGGTGTCGATGGGCGAGGCCAAAGAGAAGTGGGCAGAGCGGATTGCGCTGCTGCGCGGGTATCAGGTGAACGCGCAGATGATGGCGCTGACCGACAACCCGAACGTGAAGTTCCTGCACTGTCTGCCGGCGTTCCATGACGACCAGACTACGCTCGGCAAGCAGATGGCGAAGGAGTTCGATCTGCACGGCGGGATGGAGGTGACGGACGAGGTGTTTGAGTCGGCGGCGAGCATCGTGTTCGACCAGGCGGAAAACCGGATGCATACGATTAAGGCGGTGATGATGGCAACGCTTGGGGAGTGA", - "dna_sequence_length": 1005, - "functions": [ - "ornithine carbamoyltransferase 2, chain F", - "CP4-6 prophage" - ], - "id": "CDS_268", - "location": [ - [ - "NC_000913", - 290305, - "-", - 1005 - ] - ], - "md5": "47d66ec1bf2fc5ae2b5902dfac2b1695", - "parent_gene": "", - "protein_md5": "54625b44f67ed33ff02e0b4be34a5262", - "protein_translation": "MSDLYKKHFLKLLDFTPAQFTSLLTLAAQLKADKKNGKEVQKLTGKNIALIFEKDSTRTRCSFEVAAFDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGHGQEVVETLAQYAGVPVWNGLTNEFHPTQLLADLMTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLLAPKACWPEESLVAECSALAEKHGGKITLTEDVAAGVKGADFIYTDVWVSMGEAKEKWAERIALLRGYQVNAQMMALTDNPNVKFLHCLPAFHDDQTTLGKQMAKEFDLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMMATLGE", - "protein_translation_length": 334, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:7751632" - ], - [ - "gene_synonym", - "EcoGene:EG14492" - ], - [ - "gene_synonym", - "ykgS" - ], - [ - "gene_synonym", - "b4688" - ], - [ - "gene_synonym", - "ECK4504" - ] - ], - "dna_sequence": "GAAAATAATCGTATCTGCCTCCGATTCTCTGCAGAAGCAGAAAGACATTGGATCGAATTCTACAACCAGGTCGAGTCAGAAATGAGAATGATTGGCCTTCTTTATGATTTTAAGGATTATGCTTCTAAAATGGCGGAGAACATGGCGAGGCTTGCTGCCTTACTTCATTACTTCAGCGGTGATGGAGGCGATATATCTGTTACCG", - "dna_sequence_length": 205, - "id": "CDS_269", - "location": [ - [ - "NC_000913", - 290429, - "+", - 205 - ] - ], - "md5": "6e21e0e4100636e8fd1e32ea6651644c", - "parent_gene": "", - "protein_md5": "3c7aa5886e1a29752fe16d7d41aefe3c", - "protein_translation": "ENNRICLRFSAEAERHWIEFYNQVESEMRMIGLLYDFKDYASKMAENMARLAALLHYFSGDGGDISVT", - "protein_translation_length": 68, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0022" - ], - [ - "gene_synonym", - "b0274" - ], - [ - "gene_synonym", - "insB1" - ], - [ - "gene_synonym", - "NP_414808.1" - ], - [ - "gene_synonym", - "GI:16128259" - ], - [ - "gene_synonym", - "EcoGene:EG40002" - ], - [ - "gene_synonym", - "ASAP:ABE-0000948" - ], - [ - "gene_synonym", - "GeneID:944950" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF27" - ] - ], - "dna_sequence": "ATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGATACGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCAGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA", - "dna_sequence_length": 504, - "functions": [ - "IS1 transposase B" - ], - "id": "CDS_270", - "location": [ - [ - "NC_000913", - 291152, - "-", - 504 - ] - ], - "md5": "b3b6d14e187a3d92aafdf329f45ef694", - "parent_gene": "", - "protein_md5": "7d37bc43f614740314039784eef22b64", - "protein_translation": "MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVEQHDKVIGHYLNIKHYQ", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "insA" - ], - [ - "gene_synonym", - "GI:16128260" - ], - [ - "gene_synonym", - "EcoGene:EG40001" - ], - [ - "gene_synonym", - "GeneID:944951" - ], - [ - "gene_synonym", - "ECK4523" - ], - [ - "gene_synonym", - "NP_414809.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000951" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF09" - ], - [ - "gene_synonym", - "b0275" - ] - ], - "dna_sequence": "GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAA", - "dna_sequence_length": 276, - "functions": [ - "IS1 repressor TnpA" - ], - "id": "CDS_271", - "location": [ - [ - "NC_000913", - 291346, - "-", - 276 - ] - ], - "md5": "41231158e2773380f006f003f3c4ba9f", - "parent_gene": "", - "protein_md5": "27f7da6e06bb874058543e01b3979d8b", - "protein_translation": "MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR", - "protein_translation_length": 91, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77169" - ], - [ - "gene_synonym", - "yagJ" - ], - [ - "gene_synonym", - "b0276" - ], - [ - "gene_synonym", - "ASAP:ABE-0000963" - ], - [ - "gene_synonym", - "EcoGene:EG13549" - ], - [ - "gene_synonym", - "GeneID:949094" - ], - [ - "gene_synonym", - "ECK0275" - ], - [ - "gene_synonym", - "JW0270" - ] - ], - "dna_sequence": "ATTTTCAGCCCGGATGTTTCACGTACCTATGTCGAATATCTGGCCGATAAGGTTGCGGATCGAGAAGAGGATGCAGAGGAATATCTGGAAGCAATCATGGAGGCTCGTGTTACCGTTGCTGGCATGGGGCTGGTGATGGAGGTGCAGGATTACTTCGATGGCGAGGCCGATAGACTGGCGAAGGCGTGGCTGGCCGAGTACACACCGCAAATCAAGTCGTTGAAAGATGAGCGTAAAGAGGCCTATCGTCAAATCGTCGAAATGAGTACCGAACCGCAGGATGTGGATCTGGTCAGGCCGGCGAACAAGTTTGAAATGACCAGGGTGCGTGAAGGTGAAAAGGAAGCTGACCTTCCAGTCTGGAAACACCATTTGTTGTGTGACGAAAGCGGGAACTATCCGGCTCTGTTGAACCATTGGGAAACCAAGGTTTTTGAGATCGAAACCAAACGTGAAGGATTTGCTTTCTGGTATCGTAATCCACAGTACACAGGGCAGTCGTCACTGGGAATCGCTTATGTTGAAGCTGAACAGTACAAGATTGTTCGTCCCGATTTCCTGTTCTTTGCCGAACAGGATGGCAAAATGGTTGTGGACCTGGTAGATCCACATAGCCTACATCTGGCTGATGCTTTGCCCAAACTGGAAGGACTTGCGCTATATGCCGAACATCATTCTGATGCTTACAGGCGAATCGAATCTGTCGCCGAAGTAAAGGGTAAATTACGAGTGTTAGATTTGAAACGGCAGGATGTGCAGGATGCTGTTGCTACCGCTGAAAATGCAGAAACGTTATTTAGTAGCGGACTTGCTGATGACTATCAGTAA", - "dna_sequence_length": 828, - "id": "CDS_272", - "location": [ - [ - "NC_000913", - 291404, - "+", - 828 - ] - ], - "md5": "b69977febd471ca806657ca0fb6ed54a", - "parent_gene": "", - "protein_md5": "b3e53b7f121b8068a3b1ba2946795f66", - "protein_translation": "IFSPDVSRTYVEYLADKVADREEDAEEYLEAIMEARVTVAGMGLVMEVQDYFDGEADRLAKAWLAEYTPQIKSLKDERKEAYRQIVEMSTEPQDVDLVRPANKFEMTRVREGEKEADLPVWKHHLLCDESGNYPALLNHWETKVFEIETKREGFAFWYRNPQYTGQSSLGIAYVEAEQYKIVRPDFLFFAEQDGKMVVDLVDPHSLHLADALPKLEGLALYAEHHSDAYRRIESVAEVKGKLRVLDLKRQDVQDAVATAENAETLFSSGLADDYQ", - "protein_translation_length": 275, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yagK" - ], - [ - "gene_synonym", - "GI:16128262" - ], - [ - "gene_synonym", - "b0277" - ], - [ - "gene_synonym", - "GeneID:945847" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77657" - ], - [ - "gene_synonym", - "NP_414811.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000965" - ], - [ - "gene_synonym", - "ECK0276" - ], - [ - "gene_synonym", - "JW0271" - ], - [ - "gene_synonym", - "EcoGene:EG13550" - ] - ], - "dna_sequence": "ATGAAAACATATCAAGGTACTCATGGAGTACATATCCTCGAATATCAGAGTAAGATTAATAAATTATTATGTTATTTGACTAACCGGTATCCTAGGTTAATTGCTGTACGTGTCGATCTCCACTATCCCAAAATAGTTGATAACGGTGACAATATCTGTTGCTTCCCTAACCTGGAACCTGGGGTGATATCCCGGATGCGTGAATCCCTCAGAGCTAAGCTGGAGGCTGACCGTACCCGTAAGGTGCGTGAGGATAAACGCATTTACCGTTGCCCTTTATTTATTATATGGGCGAAAGAGTATTCTGAATCAGGTAAATGCCACTATCACATTTGCCTGTTGTTCAACAAAGACGCTTACTACCACCTCGGGGATTACGATCAGGACGATAACCTTAGAGGGATGATCACAGGAGCCTGGTACAGCGCCCTGAGACTGGAGAGAGACGATCACCCTGGTCTGGTCCATTTTCCTGAAAACTGTAAGTATGTGCTAGACACCAATAGTACTGACTTCCAGCAGAACTACCAGGCGCTGTTAACCCGACTGGACTACCTGACCAAAGTTGAAAGCAAAGTGTTTGGTGAAGGAGACCGTAACTTCGGCTGTAGCCAAATCGAACTGTAA", - "dna_sequence_length": 627, - "functions": [ - "CP4-6 prophage", - "conserved protein" - ], - "id": "CDS_273", - "location": [ - [ - "NC_000913", - 292948, - "-", - 627 - ] - ], - "md5": "f8190389c9ef536f90dd67f5e2d41cc5", - "parent_gene": "", - "protein_md5": "bc044919ecf19ff1fc1d4d905e7dcb9d", - "protein_translation": "MKTYQGTHGVHILEYQSKINKLLCYLTNRYPRLIAVRVDLHYPKIVDNGDNICCFPNLEPGVISRMRESLRAKLEADRTRKVREDKRIYRCPLFIIWAKEYSESGKCHYHICLLFNKDAYYHLGDYDQDDNLRGMITGAWYSALRLERDDHPGLVHFPENCKYVLDTNSTDFQQNYQALLTRLDYLTKVESKVFGEGDRNFGCSQIEL", - "protein_translation_length": 208, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yagL" - ], - [ - "gene_synonym", - "GI:16128263" - ], - [ - "gene_synonym", - "b0278" - ], - [ - "gene_synonym", - "NP_414812.1" - ], - [ - "gene_synonym", - "GeneID:945845" - ], - [ - "gene_synonym", - "ASAP:ABE-0000970" - ], - [ - "gene_synonym", - "EcoGene:EG13551" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77607" - ], - [ - "gene_synonym", - "ECK0277" - ], - [ - "gene_synonym", - "JW0272" - ] - ], - "dna_sequence": "ATGAGAGGTAAAATACTACTTTACCAGTTAAAGTATCGCTGGCAATCACTCTCTATTTTTGGTTGTTTTTTATGCAAAATGACATTATTCAGGTATCAAAAAATAATTTATGACACCGGAGTGCATCAGATGCGTTCATTTTTTTACACCATATGCAGTAGCGAACAGCAAGAAAGCATTACAGATCATCACTCACTTGCTGAGATATGCCAAAAATTTAATATTCTACCTGAACATGTTGTGATCGAGCAGGTAGATATTAAAGAGGTTGTTTCAGAGCAACGTTTACTCAGACAATTGATTCATCATGAAATGAACCGGCAGGACACGCTTGTCATTCCAGATCTAAGCTGTCTTGGCAGAACTGTGGAGGACTTACAGAATATTTTATTTTTTTGCCTTCAAAAAGAAATGTTTATCTACAGCTACCATCCAGCTTCAAGGATAGAGCCTTCTGCTGAAAGTTGCTTGTCTTTTTTGATTGCTCGTCAGGATACGATTGACATTCACAATCTGAAATCAACTAAAAGCCGATATCGACATGTTAAGAAAAAATTAGGACGAAAGGAGGGAAGCAAATACCGACGTGATATCACAATACTTAAGAAAGGTGGATTTACTCAGGCTGAGATTGCAAAGAAATTGAGTATCAGTTTATCGACTGTGAAGCGGCACTGGAATAACGGAATCATCGGTTAA", - "dna_sequence_length": 699, - "functions": [ - "CP4-6 prophage", - "DNA-binding protein" - ], - "id": "CDS_274", - "location": [ - [ - "NC_000913", - 293918, - "-", - 699 - ] - ], - "md5": "3af6fed31e59d363e057a69928fd884c", - "parent_gene": "", - "protein_md5": "857177c38afbdc48f0283d29f46a6336", - "protein_translation": "MRGKILLYQLKYRWQSLSIFGCFLCKMTLFRYQKIIYDTGVHQMRSFFYTICSSEQQESITDHHSLAEICQKFNILPEHVVIEQVDIKEVVSEQRLLRQLIHHEMNRQDTLVIPDLSCLGRTVEDLQNILFFCLQKEMFIYSYHPASRIEPSAESCLSFLIARQDTIDIHNLKSTKSRYRHVKKKLGRKEGSKYRRDITILKKGGFTQAEIAKKLSISLSTVKRHWNNGIIG", - "protein_translation_length": 232, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414813.1" - ], - [ - "gene_synonym", - "GI:16128264" - ], - [ - "gene_synonym", - "yagM" - ], - [ - "gene_synonym", - "b0279" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P71296" - ], - [ - "gene_synonym", - "ASAP:ABE-0000972" - ], - [ - "gene_synonym", - "ECK0278" - ], - [ - "gene_synonym", - "GeneID:944959" - ], - [ - "gene_synonym", - "EcoGene:EG13552" - ], - [ - "gene_synonym", - "JW0273" - ] - ], - "dna_sequence": "ATGTCTAATAGTGTTACTAATTTTGAGATGAGCAGCGTTCTACCAGGAAAAAAACCTTGTCAAGGCAAAAACAATGAGTCACAGGTAGTACAGACTACTCCCATAAAAAAACACTCAGTCACGTTCAAAAATCAATCTTCATTAGGAGTAATTGATCATTATGCCAGACTAACAAATAAATCTCACTCTTCCGTAATAGCGGAAGTTGTGGATTTGGCTATCCCTATATTAGAAAAATGCAATCGTCATAACTGGTCAATAAATGAAATAAAAAATGACCTGTTAAAGTTCTCTATAAAAGAAAGCATCAATCGAAGCCGAGGTAAAACAGAAGTAACTCTGGAAGAGTACTGTTCGTTAATCTGGAAAACGAACATCATGAGTCCATTAAAAATCCCCATTGCAGATTACTTTCAACTGAACGCTAATGATGAATTCATGGGGAAAGATGAAAAAACAGTTATACGTGAAAGGCTATCCTCGCTAAGGGAAAATTACGATATGGAAAAAGCCATTTACATTTACAATCAAAGACATTTTGATGTAAAGCATCAAAGTGTCTCAGGATATTCAAACATTATTCTTATTCATAGAACAACCTTTGAGGGTTATTACTTTGATGCCGGGCAGGCTCTACTCTTGTCAACATCCCAATTGATTATATTCGGGATAAATGAAGTTCTTAGAAGAAAGGGGATTGTTATGCCTTATCCGGTTGTTTGTTGGATTGATATTTACCATGTCAATGAAATGGTGGTTATGCTGCCAGTGCTCCGCAAAACAGATGTTTCCAACCGTGTTAATGTACCGGATGACATCATTATAAACCCATACTCACAAGAGAGCAGAACCTAA", - "dna_sequence_length": 855, - "functions": [ - "CP4-6 prophage", - "uncharacterized protein" - ], - "id": "CDS_275", - "location": [ - [ - "NC_000913", - 294799, - "-", - 855 - ] - ], - "md5": "a263cad84eb864bdf5ad599c2134ba44", - "parent_gene": "", - "protein_md5": "0e2ae6a78bfe082a381dc4681bbb317f", - "protein_translation": "MSNSVTNFEMSSVLPGKKPCQGKNNESQVVQTTPIKKHSVTFKNQSSLGVIDHYARLTNKSHSSVIAEVVDLAIPILEKCNRHNWSINEIKNDLLKFSIKESINRSRGKTEVTLEEYCSLIWKTNIMSPLKIPIADYFQLNANDEFMGKDEKTVIRERLSSLRENYDMEKAIYIYNQRHFDVKHQSVSGYSNIILIHRTTFEGYYFDAGQALLLSTSQLIIFGINEVLRRKGIVMPYPVVCWIDIYHVNEMVVMLPVLRKTDVSNRVNVPDDIIINPYSQESRT", - "protein_translation_length": 284, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128265" - ], - [ - "gene_synonym", - "yagN" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P71297" - ], - [ - "gene_synonym", - "ASAP:ABE-0000976" - ], - [ - "gene_synonym", - "b0280" - ], - [ - "gene_synonym", - "ECK0279" - ], - [ - "gene_synonym", - "JW0274" - ], - [ - "gene_synonym", - "GeneID:945349" - ], - [ - "gene_synonym", - "NP_414814.1" - ], - [ - "gene_synonym", - "EcoGene:EG13553" - ] - ], - "dna_sequence": "ATGGCAACCCCAGCAACTGTATCCATAGAACCCACTCTGGCAGCTATCAGAGCTCGCTGGTGTATTAATTCAAGTAAAACAACTCAATCCTTTAACGATCCTGCGTCCATGGAAGAGGTTGTCGAGTATCTCAAAGGAACATACTCAGCTCTTCGCAAGTCTGTCGCATGCGCCAAACTGAAAATTTTACATCTTAAACAAAGAATGCAAAATGCTACTAACTTTCTCGCGCGTCTGATGTCATGTAAAAATCAGGCATCCAGATCGCATCACAGTACGGCTAAATCAGCTAAAAGTGCCTTATCATCAGATTCAGGTGATGGTAGTGACCCCGACCCCGAGCCCGAAACGTTTCCTTCTGCCTTCATTACTACCCCTACTAATTCAATAATGCTTAAAGCTTTCTTTGCCAATATCTCAATCACTGAGGTGGCAAAATGA", - "dna_sequence_length": 441, - "functions": [ - "CP4-6 prophage", - "uncharacterized protein" - ], - "id": "CDS_276", - "location": [ - [ - "NC_000913", - 295579, - "-", - 441 - ] - ], - "md5": "9e21439c2de6e3aa97930b1d11fc2ebb", - "parent_gene": "", - "protein_md5": "a8beb55dcc0d150c8874fa37d910afad", - "protein_translation": "MATPATVSIEPTLAAIRARWCINSSKTTQSFNDPASMEEVVEYLKGTYSALRKSVACAKLKILHLKQRMQNATNFLARLMSCKNQASRSHHSTAKSAKSALSSDSGDGSDPDPEPETFPSAFITTPTNSIMLKAFFANISITEVAK", - "protein_translation_length": 146, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yagO" - ], - [ - "gene_synonym", - "intF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P71298" - ], - [ - "gene_synonym", - "b0281" - ], - [ - "gene_synonym", - "ECK0280" - ], - [ - "gene_synonym", - "GI:16128266" - ], - [ - "gene_synonym", - "ASAP:ABE-0000979" - ], - [ - "gene_synonym", - "JW0275" - ], - [ - "gene_synonym", - "EcoGene:EG13554" - ], - [ - "gene_synonym", - "GeneID:947351" - ], - [ - "gene_synonym", - "NP_414815.1" - ] - ], - "dna_sequence": "ATGTTTATTCCCTCCATTTACTTACACCAGCAGTTACATTATTGTAAGACAGCAATTCTCAACTGGAGCCGAAAAATGGCGCTTTCAAGACAAAAATTTACCTTCGAAAGACTTCGCAGATTCACCTTACCGGAAGGGAAAAAACAAACTTTTCTTTGGGATGCAGATGTAACAACCCTGGCATGCCGAGCAACTAGCGGAGCAAAAGCCTTTGTATTCCAAAGCGTATATGCGGGGAAAACCCTTCGCATGACTATTGGCAACATTAACGACTGGAAGATTGATGATGCGAGAGCCGAGGCAAGACGGTTACAAACATTGATCGATACAGGGATAGATCCACGAATTGCTAAGGCTGTAAAAATCGCAGAAGCAGAATCCCTGCAGGCAGAATCACGTAAAACAAAAGTGACTTTCTCCGTCGCCTGGGAAGACTATCTTCAAGAATTGAGAACCGGTATCAGTGCAAAAACTAAACGCCCATATTCTACTCGATACATTGCCGATCACATTAACTTGTCCAGTCGTGGAGGCGAAAGTAAAAAAAGAGGCCAAGGCCCGACTTCGGCTGGACCATTGGCTAGTTTGCTCAACCTGCCGTTATCGGAGCTAACCCCAGATTACATAGCAGCGTGGCTGAGTACAGAAAGGCAAAATAGACCTACCGTCACTGCTCACGCTTATCGCCTACTACGTGCTTTCATCAAATGGAGTAATTATCAGAAAAAATATCAAGGGATCATTCCTGGCGATCTGGCACAAGATTACAACGTAAGAAAAATGGTTCCCGTGTCAGCGAGTAAAGCTGATGATTGCCTGCAAAAGGAACAACTAAAAAGCTGGTTTAGTGCCGTGCGTAGCCTCAATAATCCTATTGCATCGGCCTATCTCCAAGTACTTTTGCTCACTGGTGCTCGGCGTGAAGAAATTGCGTCGCTTCGCTGGTCAGACGTAGATTTCAAATGGTCAAGCATGCGAATTAAAGACAAGATCGAAGGTGAACGTATCATCCCTCTCACTCCTTATGTTTCTGAATTGTTAAATGTACTAGCGCAATCCCCAAATTCTGACGTAAATAAGGAGGGTTGGGTTTTCAGAAGTAACAGTAAAAGTGGCAAAATTATTGAGCCGCGTTCAGCGCACAACAGAGCATTAGTGCTGGCTGAGTTACCACATATCAGCCTTCACGGTTTACGTCGTAGTTTTGGTACTTTGGCCGAGTGGGTTGAAGTTCCCACTGGTATTGTTGCTCAAATTATGGGACACAAACCCAGCGCTCTTGCCGAAAAACACTATCGCCGTCGTCCGTTAGATCTGTTACGAAAATGGCACGAGAAAATTGAGACATGGATCTTAAATGAAGCAGGTATTACCATAAAAAACAACGTTGATATGCGTTGA", 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"UniProtKB/Swiss-Prot:P75684" - ], - [ - "gene_synonym", - "b4694" - ], - [ - "gene_synonym", - "yagP" - ], - [ - "gene_synonym", - "GeneID:7751633" - ], - [ - "gene_synonym", - "JW0276" - ], - [ - "gene_synonym", - "ASAP:ABE-0000982" - ] - ], - "dna_sequence": "CATAAGTGTATCGGCTGGCGTCAGTCCCCGGAGGTTGCGCCTTATCGCTGGCCATTTGAAGAAAACGGGAGAACTTTCGACCTTGCGATTGAACCGCAGATTACGACTAATGATCTGCGTCTGATGTTGAGGCTGGCTCTTGCCGGCGGAGGAATAACAATTGCCACTCAGGAAACTTTCAGGCCATATATTGAAAGCGGTAAGCTTGTATCGCTGCTTGATGACTTTCTTCCACAATTTCCGGGCTTCTATCTGTATTTCCCACAGCGTCGCAATATTGCACCAAAGCTCCGCGCCCTGATTGACTACGTCAAAGAATGGCGGCAGCAATTGGCTTAA", - "dna_sequence_length": 339, - "id": "CDS_278", - "location": [ - [ - "NC_000913", - 297719, - "-", - 339 - ] - ], - "md5": "03b0bd127c18d2451e51b9c5161ae959", - "parent_gene": "", - "protein_md5": "be934510fb721b2ffb159edd671b4bc7", - "protein_translation": "HKCIGWRQSPEVAPYRWPFEENGRTFDLAIEPQITTNDLRLMLRLALAGGGITIATQETFRPYIESGKLVSLLDDFLPQFPGFYLYFPQRRNIAPKLRALIDYVKEWRQQLA", - "protein_translation_length": 112, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4508" - ], - [ - "gene_synonym", - "GeneID:7751634" - ], - [ - "gene_synonym", - "ykgT" - ], - [ - "gene_synonym", - "EcoGene:EG14496" - ], - [ - "gene_synonym", - "b4695" - ], - [ - "gene_synonym", - "yagP" - ] - ], - "dna_sequence": "ATGCCTGCCCCCGTCGTCCTGATCCTTGCGGCCGGGCGTGGAGAGTGCTTTCTCGCCTCCGGGGGAAATACCCATAAG", - "dna_sequence_length": 78, - "id": "CDS_279", - "location": [ - [ - "NC_000913", - 297791, - "-", - 78 - ] - ], - "md5": "fa34cd334e11adc2e0cb8bc4ba037afd", - "parent_gene": "", - "protein_md5": "b57f43c8ae7c6d236d30f78de96166f7", - "protein_translation": "MPAPVVLILAAGRGECFLASGGNTHK", - "protein_translation_length": 26, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945010" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77183" - ], - [ - "gene_synonym", - "NP_414817.1" - ], - [ - "gene_synonym", - "GI:16128268" - ], - [ - "gene_synonym", - "b0283" - ], - [ - "gene_synonym", - "ECK0282" - ], - [ - "gene_synonym", - "paoD" - ], - [ - "gene_synonym", - "EcoGene:EG13556" - ], - [ - "gene_synonym", - "ASAP:ABE-0000984" - ], - [ - "gene_synonym", - "JW0277" - ], - [ - "gene_synonym", - "yagQ" - ] - ], - "dna_sequence": "ATGTCATACCCGCTTTTTGACAAAGACGAACACTGGCATAAGCCAGAGCAGGCGTTTCTCACCGATGACCACCGGACCATTCTGCGCTTCGCCGTAGAGGCGCTAATGTCCGGTAAAGGAGCGGTGCTGGTGACGCTGGTGGAGATACGCGGCGGCGCGGCGCGCCCGCTCGGGGCGCAGATGGTGGTGCGCGAAGATGGTCGTTACTGCGGTTTTGTCTCTGGCGGCTGCGTGGAGGCCGCTGCCGCTTTTGAAGCGCTGGAGATGATGGGCTCAGGCCGCGATCGCGAAATTCGCTATGGCGAAGGTTCGCCGTGGTTTGACATCGTTCTGCCCTGCGGCGGTGGGATCACGCTGACGCTCCATAAACTACGCTCGGCACAGCCTCTGCTCGCCGTGCTGAACCGCCTGGAACAGAGAAAACCGGTGGGGCTGCGCTACGATCCGCAAGCACAATCGCTGGTGTGCCTGCCCACGCAAACCCGGACGGGCTGGAATCTCAATGGCTTTGAGGTGGGGTTCAGGCCATGCGTCAGGCTGATGATTTACGGACGTTCTCTTGAGGCGCAGGCAACCGCGAGTCTTGCAGCAGCCACAGGCTATGACAGCCATATCTTCGATCTTTTTCCGGCCTCAGCCAGCGCTCAGATCGATACCGATACGGCGGTCATTTTGCTGTGCCATGATCTCAACCGGGAGCTGCCAGTGTTGCAGGCCGCGCGAGAAGCAAAACCCTTTTATCTCGGCGCATTGGGCAGCTATCGAACCCACACGTTACGTCTGCAAAAGCTCCACGAGCTGGGATGGTCCAGGGAGGAAACAACGCAAATCCGGGCACCCGTCGGGATATTCCCCAAAGCCCGGGATGCGCATACTCTGGCACTCTCCGTGCTGGCAGAAGTCGCCTCTGTACGTCTCCATCAGGAGGAGGATTCATGCCTGCCCCCGTCGTCCTGA", - "dna_sequence_length": 957, - "functions": [ - "moco insertion factor for PaoABC aldehyde oxidoreductase" - ], - "id": "CDS_280", - "location": [ - [ - "NC_000913", - 298726, - "-", - 957 - ] - ], - "md5": "8fbd98cb634de6c71eda6db4bce82b6c", - "parent_gene": "", - "protein_md5": "705e074b4ab5f23d1bec82a9fd9819a0", - "protein_translation": "MSYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQMVVREDGRYCGFVSGGCVEAAAAFEALEMMGSGRDREIRYGEGSPWFDIVLPCGGGITLTLHKLRSAQPLLAVLNRLEQRKPVGLRYDPQAQSLVCLPTQTRTGWNLNGFEVGFRPCVRLMIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAAREAKPFYLGALGSYRTHTLRLQKLHELGWSREETTQIRAPVGIFPKARDAHTLALSVLAEVASVRLHQEEDSCLPPSS", - "protein_translation_length": 318, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414818.1" - ], - [ - "gene_synonym", - "b0284" - ], - [ - "gene_synonym", - "GI:16128269" - ], - [ - "gene_synonym", - "GeneID:944961" - ], - [ - "gene_synonym", - "hsm" - ], - [ - "gene_synonym", - "ECK0283" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77489" - ], - [ - "gene_synonym", - "paoC" - ], - [ - "gene_synonym", - "JW0278" - ], - [ - "gene_synonym", - "ASAP:ABE-0000988" - ], - [ - "gene_synonym", - "EcoGene:EG13557" - ], - [ - "gene_synonym", - "yagR" - ] - ], - "dna_sequence": "ATGAAATTTGATAAACCCGCAGGGGAAAACCCGATCGATCAGCTGAAGGTTGTCGGTCGTCCCCATGACCGCATCGACGGACCGCTGAAAACTACCGGCACGGCACGCTACGCCTACGAATGGCATGAAGAAGCCCCCAACGCCGCCTATGGCTATATCGTCGGTTCCGCCATTGCCAAAGGACGCCTCACCGCCCTTGATACGGACGCCGCGCAAAAAGCGCCGGGCGTACTGGCTGTCATTACCGCCAGTAACGCCGGGGCACTCGGCAAAGGCGACAAAAACACCGCCAGGCTGTTAGGCGGCCCCACTATTGAGCACTATCATCAGGCCATTGCGCTGGTAGTGGCCGAGACCTTCGAACAGGCGCGAGCGGCGGCCTCGCTGGTGCAGGCACACTATCGCCGTAATAAAGGAGCTTACTCCCTGGCGGACGAAAAACAGGCCGTCAATCAGCCGCCGGAAGACACGCCCGACAAAAACGTCGGTGACTTTGACGGGGCTTTCACCTCCGCTGCGGTGAAGATTGATGCTACCTACACGACCCCGGACCAGAGCCATATGGCGATGGAGCCGCATGCCTCGATGGCCGTCTGGGATGGAAATAAGCTTACCCTCTGGACCTCAAATCAGATGATTGACTGGTGCCGCACCGATCTGGCAAAAACGCTGAAAGTTCCCGTGGAGAATGTGCGTATTATCTCCCCGTATATCGGCGGAGGGTTTGGCGGCAAGCTGTTCCTGAGAAGCGATGCGCTGCTGGCGGCCCTCGCCGCCCGAGCGGTGAAACGTCCGGTTAAAGTGATGCTCCCCCGCCCCTCTATTCCCAATAACACCACGCACCGCCCCGCCACCCTTCAGCACTTGCGTATCGGTGCCGACCAGAGCGGGAAAATCACCGCTATCTCACATGAAAGCTGGTCTGGAAACCTGCCCGGCGGCACGCCGGAAACGGCGGTACAGCAAAGCGAATTACTCTACGCCGGGGCGAATCGTCATACCGGCCTGCGGCTCGCCACGCTTGATTTGCCGGAAGGGAACGCCATGCGTGCGCCCGGCGAAGCCCCCGGTCTGATGGCGCTCGAAATCGCGATCGACGAACTGGCGGAAAAAGCGGGCATCGATCCCGTCGAGTTTCGCATCCTGAATGACACTCAGGTTGACCCCGCCGACCCGACGCGCTGCTTCTCTCGCCGTCAGCTTATCGAGTGCTTGCGCACCGGAGCGGATAAATTTGGCTGGAAGCAGCGCAACGCCACACCCGGACAGGTGCGCGACGGGGAGTGGCTAGTCGGCCACGGTGTTGCGGCGGGCTTTCGCAATAATCTGCTGGAAAAATCGGGTGCTCGGGTTCACCTCGAACAAAACGGCACCGTTACCGTAGAAACGGACATGACCGACATTGGCACCGGCAGCTACACCATTCTGGCCCAGACGGCAGCGGAAATGCTTGGCGTACCGCTGGAGCAGGTTGCGGTTCACCTCGGCGATTCCAGTTTCCCGGTTTCTGCGGGTTCTGGTGGACAATGGGGCGCGAATACCTCCACCTCCGGCGTTTACGCCGCCTGTATGAAGCTTCGCGAAATGATTGCCTCGGCAGTCGGGTTTGATCCTGAGCAGTCGCAGTTTGCCGACGGCAAGATTACCAACGGTACCCGAAGCGCCACGCTACATGAAGCCACCGCAGGCGGCAGACTGACAGCGGAAGAGAGCATTGAATTCGGAACACTGAGCAAAGAGTACCAGCAGTCGACCTTTGCCGGGCATTTTGTGGAGGTCGGCGTGCATAGCGCGACGGGAGAAGTTCGGGTCCGGCGTATGCTCGCTGTGTGTGCTGCAGGACGCATCCTGAATCCGAAAACTGCGCGCAGCCAGGTCATTGGCGCAATGACTATGGGCATGGGCGCGGCACTGATGGAGGAGCTGGCGGTGGATGACCGTTTGGGCTACTTCGTTAATCACGATATGGCGGGGTATGAGGTGCCGGTTCATGCGGATATCCCAAAACAGGAGGTGATTTTCCTGGATGATACCGACCCCATATCCTCCCCGATGAAGGCCAAAGGTGTCGGTGAGCTGGGCCTGTGCGGCGTGAGCGCGGCTATCGCCAACGCGGTGTATAACGCCACCGGTATTCGGGTACGGGATTATCCCATCACTCTGGATAAGCTGCTCGATAAGCTGCCGGATGTGGTTTAA", 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"MKFDKPAGENPIDQLKVVGRPHDRIDGPLKTTGTARYAYEWHEEAPNAAYGYIVGSAIAKGRLTALDTDAAQKAPGVLAVITASNAGALGKGDKNTARLLGGPTIEHYHQAIALVVAETFEQARAAASLVQAHYRRNKGAYSLADEKQAVNQPPEDTPDKNVGDFDGAFTSAAVKIDATYTTPDQSHMAMEPHASMAVWDGNKLTLWTSNQMIDWCRTDLAKTLKVPVENVRIISPYIGGGFGGKLFLRSDALLAALAARAVKRPVKVMLPRPSIPNNTTHRPATLQHLRIGADQSGKITAISHESWSGNLPGGTPETAVQQSELLYAGANRHTGLRLATLDLPEGNAMRAPGEAPGLMALEIAIDELAEKAGIDPVEFRILNDTQVDPADPTRCFSRRQLIECLRTGADKFGWKQRNATPGQVRDGEWLVGHGVAAGFRNNLLEKSGARVHLEQNGTVTVETDMTDIGTGSYTILAQTAAEMLGVPLEQVAVHLGDSSFPVSAGSGGQWGANTSTSGVYAACMKLREMIASAVGFDPEQSQFADGKITNGTRSATLHEATAGGRLTAEESIEFGTLSKEYQQSTFAGHFVEVGVHSATGEVRVRRMLAVCAAGRILNPKTARSQVIGAMTMGMGAALMEELAVDDRLGYFVNHDMAGYEVPVHADIPKQEVIFLDDTDPISSPMKAKGVGELGLCGVSAAIANAVYNATGIRVRDYPITLDKLLDKLPDVV", - "protein_translation_length": 732, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77324" - ], - [ - "gene_synonym", - "ASAP:ABE-0000990" - ], - [ - "gene_synonym", - "b0285" - ], - [ - "gene_synonym", - "paoB" - ], - [ - "gene_synonym", - "JW0279" - ], - [ - "gene_synonym", - "ECK0284" - ], - [ - "gene_synonym", - "EcoGene:EG13558" - ], - [ - "gene_synonym", - "NP_414819.1" - ], - [ - "gene_synonym", - "yagS" - ], - [ - "gene_synonym", - "GI:16128270" - ], - [ - "gene_synonym", - "GeneID:945710" - ] - ], - "dna_sequence": "ATGAAGGCGTTTACCTATGAACGAGTGAATACCCCAGCCGAGGCGGCACTTAGCGCTCAGCGCGTACCCGGCGCAAAATTTATCGCGGGCGGGACCAATCTGCTGGACCTGATGAAGCTGGAAATTGAAACGCCCACCCACCTTATCGATGTGAACGGCCTCGGGCTCGATAAGATTGAAGTGACCGACGCGGGTGGGCTGCGCATCGGCGCACTGGTACGGAACACCGACCTGGCGGCTCACGAGCGCGTGCGTCGTGATTACGCGGTACTCTCCCGCGCCCTGCTCGCTGGCGCGTCTGGTCAGTTACGTAATCAGGCAACCACCGCAGGTAATCTGCTCCAGCGCACGCGCTGCCCCTATTTTTACGACACCAATCAGCCCTGCAATAAGCGCCTGCCCGGGAGCGGCTGCGCGGCGCTTGAAGGCTTTAGCCGTCAGCACGCGGTGGTAGGCGTAAGCGAAGCCTGCATTGCCACCCATCCGAGCGATATGGCGGTCGCAATGCGGTTGCTGGATGCGGTGGTGGAAACCATCACGCCGGAGGGAAAGACTCGCAGTATCACACTGGCTGATTTTTATCACCCTCCGGGAAAAACGCCGCACATTGAAACCGCCCTGCTTCCCGGTGAGCTTATCGTTGCGGTGACGTTACCTCCACCGCTCGGCGGAAAACATATCTACCGTAAGGTGCGCGATCGCGCCTCCTACGCCTTTGCCCTGGTATCGGTCGCGGCGATTATTCAGCCTGACGGCAGCGGGCGCGTCGCGCTGGGCGGAGTAGCACATAAGCCCTGGCGCATTGAGGCTGCGGATGCTCAGCTATCCCAGGGGGCGCAGGCCGTATATGACACGCTGTTCGCCAGCGCCCATCCCACCGCTGAAAACACCTTTAAACTCCTGTTGGCGAAGCGAACGCTTGCCTCCGTACTGGCTGAAGCGAGGGCACAGGCATGA", - "dna_sequence_length": 957, - "functions": [ - "PaoABC aldehyde oxidoreductase, FAD-containing subunit" - ], - "id": "CDS_282", - "location": [ - [ - "NC_000913", - 301887, - "-", - 957 - ] - ], - "md5": "cf6da5421681a88aa6dd0eeecc6f22fd", - "parent_gene": "", - "protein_md5": "2ae497564efa052e9c9610acd5f4aee8", - "protein_translation": "MKAFTYERVNTPAEAALSAQRVPGAKFIAGGTNLLDLMKLEIETPTHLIDVNGLGLDKIEVTDAGGLRIGALVRNTDLAAHERVRRDYAVLSRALLAGASGQLRNQATTAGNLLQRTRCPYFYDTNQPCNKRLPGSGCAALEGFSRQHAVVGVSEACIATHPSDMAVAMRLLDAVVETITPEGKTRSITLADFYHPPGKTPHIETALLPGELIVAVTLPPPLGGKHIYRKVRDRASYAFALVSVAAIIQPDGSGRVALGGVAHKPWRIEAADAQLSQGAQAVYDTLFASAHPTAENTFKLLLAKRTLASVLAEARAQA", - "protein_translation_length": 318, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128271" - ], - [ - "gene_synonym", - "GeneID:945330" - ], - [ - "gene_synonym", - "b0286" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77165" - ], - [ - "gene_synonym", - "paoA" - ], - [ - "gene_synonym", - "JW0280" - ], - [ - "gene_synonym", - "EcoGene:EG13559" - ], - [ - "gene_synonym", - "ECK0285" - ], - [ - "gene_synonym", - "ASAP:ABE-0000992" - ], - [ - "gene_synonym", - "yagT" - ], - [ - "gene_synonym", - "NP_414820.1" - ] - ], - "dna_sequence": "ATGAGCAACCAAGGCGAATACCCCGAAGATAATCGGGTTGGGAAGCACGAGCCGCACGATTTAAGTTTGACCCGTCGCGATCTGATTAAAGTGAGCGCCGCAACAGCGGCGACCGCCGTGGTTTATCCTCATTCTACGCTGGCGGCAAGCGTTCCGGCAGCTACACCCGCGCCAGAGATAATGCCCCTGACACTGAAGGTGAACGGCAAAACCGAGCAGCTTGAGGTGGATACCCGAACCACGCTACTGGACACTTTGCGTGAAAATCTGCATTTGATCGGTACCAAGAAAGGTTGCGATCACGGACAGTGCGGAGCCTGTACCGTGCTGGTCAATGGTCGCAGGCTTAATGCCTGCCTGACGCTTGCAGTCATGCATCAGGGGGCCGAGATCACCACCATTGAAGGCCTGGGTTCGCCAGATAATCTTCACCCCATGCAGGCGGCCTTTATCAAGCATGATGGCTTCCAGTGCGGCTACTGCACCTCCGGGCAAATTTGCTCATCAGTAGCGGTGCTAAAAGAGATTCAGGACGGCATTCCCAGTCACGTCACGGTCGATTTGGTTTCCGCTCCAGAAACAACTGCCGATGAGATCCGTGAACGTATGAGCGGCAACATCTGTCGCTGTGGTGCATACGCTAACATCCTTGCCGCCATTGAAGATGCTGCGGGGGAGATAAAATCATGA", - "dna_sequence_length": 690, - "functions": [ - "PaoABC aldehyde oxidoreductase, 2Fe-2S subunit" - ], - "id": "CDS_283", - "location": [ - [ - "NC_000913", - 302573, - "-", - 690 - ] - ], - "md5": "8b62a3680fe9faa4b16dcd0d08b6fbf4", - "parent_gene": "", - "protein_md5": "5cc5ee9665ec3b972d55c960e92d608d", - "protein_translation": "MSNQGEYPEDNRVGKHEPHDLSLTRRDLIKVSAATAATAVVYPHSTLAASVPAATPAPEIMPLTLKVNGKTEQLEVDTRTTLLDTLRENLHLIGTKKGCDHGQCGACTVLVNGRRLNACLTLAVMHQGAEITTIEGLGSPDNLHPMQAAFIKHDGFQCGYCTSGQICSSVAVLKEIQDGIPSHVTVDLVSAPETTADEIRERMSGNICRCGAYANILAAIEDAAGEIKS", - "protein_translation_length": 229, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAA1" - ], - [ - "gene_synonym", - "GeneID:945677" - ], - [ - "gene_synonym", - "b0287" - ], - [ - "gene_synonym", - "JW0281" - ], - [ - "gene_synonym", - "EcoGene:EG13560" - ], - [ - "gene_synonym", - "GI:16128272" - ], - [ - "gene_synonym", - "ECK0286" - ], - [ - "gene_synonym", - "yagU" - ], - [ - "gene_synonym", - "NP_414821.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0000995" - ] - ], - "dna_sequence": "ATGAATATATTTGAACAAACTCCACCGAACCGCAGACGTTATGGTCTTGCTGCATTCATTGGGCTGATTGCTGGCGTTGTTTCCGCATTCGTGAAGTGGGGGGCTGAAGTTCCATTGCCGCCACGTAGCCCGGTGGATATGTTTAATGCAGCGTGTGGCCCGGAATCATTAATCAGGGCTGCAGGCCAAATTGATTGCTCGCGTAATTTTCTCAATCCACCGTATATTTTTCTTCGAGACTGGTTGGGGCTGACAGATCCCAATGCGGCTGTTTATACCTTTGCCGGGCATGTCTTTAACTGGGTTGGTGTTACGCACATTATCTTTTCGATAGTGTTTGCTGTCGGTTATTGTGTGGTCGCTGAAGTATTTCCAAAAATTAAACTCTGGCAGGGCTTACTGGCAGGTGCTTTAGCCCAACTTTTTGTTCATATGATTTCATTCCCTCTCATGGGACTGACGCCACCTCTGTTTGATCTCCCGTGGTATGAGAATGTTTCTGAAATTTTTGGACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAA", - "dna_sequence_length": 615, - "functions": [ - "DUF1440 family inner membrane acid resistance protein" - ], - "id": "CDS_284", - "location": [ - [ - "NC_000913", - 302991, - "+", - 615 - ] - ], - "md5": "774c888372b72461680d507fb14ac873", - "parent_gene": "", - "protein_md5": "401df03ac6e518ec8fd3816bc4874931", - "protein_translation": "MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRNRITHEPDPEIPLGSNR", - "protein_translation_length": 204, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0288" - ], - [ - "gene_synonym", - "NP_414822.1" - ], - [ - "gene_synonym", - "GeneID:945905" - ], - [ - "gene_synonym", - "ECK0287" - ], - [ - "gene_synonym", - "JW0282" - ], - [ - "gene_synonym", - "GI:16128273" - ], - [ - "gene_synonym", - "EcoGene:EG14323" - ], - [ - "gene_synonym", - "ykgJ" - ], - [ - "gene_synonym", - "ASAP:ABE-0000997" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAL9" - ] - ], - "dna_sequence": "ATGAGCAATCTGAATCCATGCATGACGTGTGGTGCCTGTTGTGCATTTTTCCGCGTCTCTTTTTACTGGGCCGAAGCCGACGATGCTGGCGGTACTATTCCCGCCAGGCTCACTGAACAAATATCCCCTTTTCACCGATGCATGAGCGGTACCAATCAGAAAAACCCCCGATGTATTGCCCTTGCAGGAACCCCGGGCAAAAATGCCTGCTGCACGATATATAAAAATCGATCGTCCACATGCAGAGAATTCGCCATGTCTGGTGAGAACGGAGTCGTCAATGAGGCTTGCAATCGTGCAAGGGCTAAATACGGGCTGACACCGTTATAA", - "dna_sequence_length": 330, - "functions": [ - "UPF0153 cysteine cluster protein" - ], - "id": "CDS_285", - "location": [ - [ - "NC_000913", - 304182, - "-", - 330 - ] - ], - "md5": "21b9ae3e5b82650ed83f6ee4f04e9fce", - "parent_gene": "", - "protein_md5": "ad6491738862cd4bb7dd568c25ba802a", - "protein_translation": "MSNLNPCMTCGACCAFFRVSFYWAEADDAGGTIPARLTEQISPFHRCMSGTNQKNPRCIALAGTPGKNACCTIYKNRSSTCREFAMSGENGVVNEACNRARAKYGLTPL", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5030" - ], - [ - "gene_synonym", - "b0289" - ], - [ - "gene_synonym", - "GeneID:946631" - ], - [ - "gene_synonym", - "NP_414823.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77263" - ], - [ - "gene_synonym", - "GI:90111108" - ], - [ - "gene_synonym", - "ASAP:ABE-0001000" - ], - [ - "gene_synonym", - "matF" - ], - [ - "gene_synonym", - "EcoGene:EG13561" - ], - [ - "gene_synonym", - "yagV" - ], - [ - "gene_synonym", - "ECK0288" - ], - [ - "gene_synonym", - "ecpE" - ] - ], - "dna_sequence": "ATGTTCAGGCGACGTGGCGTAACATTAACTAAGGCCCTGCTGACAGCGGTCTGTATGCTGGCGGCACCTTTGACACAGGCGATTTCGGTCGGCAATCTGACATTTTCGCTGCCGTCCGAGACTGACTTTGTCAGCAAACGTGTAGTGAATAACAACAAAAGCGCACGGATATACCGTATTGCCATCAGTGCTATTGATAGCCCGGGCAGCAGTGAATTGCGCACCCGACCGGTGGATGGTGAACTGCTTTTCGCCCCCCGCCAGCTGGCGTTGCAGGCTGGTGAGAGCGAGTATTTTAAATTTTACTATCATGGTCCACGGGATAACCGCGAGCGCTACTACCGGGTCTCATTTCGCGAGGTCCCCACTCGTAACCATACAAGACGCAGCCCAACCGGCGGCGTGGTCAGCACGGAGCCGGTGGTGGTGATGGATACCATTCTGGTAGTACGACCACGTCAGGTTCAGTTTAAATGGTCCTTCGACAAGGTGACAGGAACGGTAAGTAACACTGGCAACACATGGTTTAAGCTACTGATTAAGCCAGGATGTGATTCGACCGAAGAGGAAGGCGATGCCTGGTATCTACGTCCGGGAGACGTGGTTCATCAGCCTGAGTTACGTCAGCCGGGGAATCACTATCTGGTCTATAACGACAAATTCATTAAGATTAGCGATTCCTGTCCGGCTAAGCCCCCTTCGGCGGACTAA", - "dna_sequence_length": 711, - "functions": [ - "ECP production pilus chaperone" - ], - "id": "CDS_286", - "location": [ - [ - "NC_000913", - 305205, - "-", - 711 - ] - ], - "md5": "9d9c171315e7cd8dae2242f2113b95c5", - "parent_gene": "", - "protein_md5": "c702368c5aab7f5f3ee56905d0a4070c", - "protein_translation": "MFRRRGVTLTKALLTAVCMLAAPLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRIAISAIDSPGSSELRTRPVDGELLFAPRQLALQAGESEYFKFYYHGPRDNRERYYRVSFREVPTRNHTRRSPTGGVVSTEPVVVMDTILVVRPRQVQFKWSFDKVTGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVHQPELRQPGNHYLVYNDKFIKISDSCPAKPPSAD", - "protein_translation_length": 236, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77694" - ], - [ - "gene_synonym", - "ASAP:ABE-0001002" - ], - [ - "gene_synonym", - "b0290" - ], - [ - "gene_synonym", - "JW0284" - ], - [ - "gene_synonym", - "NP_414824.1" - ], - [ - "gene_synonym", - "matE" - ], - [ - "gene_synonym", - "EcoGene:EG13562" - ], - [ - "gene_synonym", - "GeneID:947349" - ], - [ - "gene_synonym", - "yagW" - ], - [ - "gene_synonym", - "ECK0289" - ], - [ - "gene_synonym", - "ecpD" - ], - [ - "gene_synonym", - "GI:16128275" - ] - ], - "dna_sequence": "ATGAGAGTTAACCTACTAATAACGATGATAATTTTCGCGCTAATCTGGCCAGTAACTGCGCTCAGAGCGGCAGTGAGCAAAACAACCTGGGCGGATGCACCGGCACGCGAGTTTGTGTTTGTCGAAAACAACTCAGACGACAACTTTTTCGTCACTCCTGGCGGGGCGCTGGATCCGCGCCTGACCGGTGCCAACCGCTGGACCGGTTTAAAATACACTGGTTCAGGAACCATCTATCAGCAAAGCCTCGGCTACATTGATAACGGTTACAACACCGGCCTTTATACCAACTGGAAGTTTGATATGTGGCTGGAAAATTCACCAGTTTCATCTCCTTTAACTGGCTTGCGCTGCATCAACTGGTACGCTGGGTGTAATATGACCACCAGTCTTATCCTGCCGCAAACCACCGACGCCAGTGGATTTTATGGCGCGACGGTGACCAGCGGCGGCGCGAAGTGGATGCACGGCATGTTGTCAGACGCGTTTTACCAGTATATGCAACAAATGCCCGTCGGCAGCAGCTTTACAATGACCATCAATGCCTGCCAGACCTCTGTGAACTATGACGCCAGCAGCGGCGCACGCTGTAAGGATCAGGCCTCCGGCAACTGGTATGTTCGCAACGTCACCCATACGAAAGCAGCAAATCTACGGTTGATAAATACCCACTCGCTGGCGGAAGTATTTATCAACAGCGACGGAGTACCGACTCTGGGCGAAGGGAACGCCGACTGCCGGACGCAAACCATCGGCAGCCGTTCAGGATTAAGTTGTAAGATGGTTAACTATACCCTGCAAACAAACGGACTCAGCAACACCTCAATCCATATATTCCCGGCGATCGCCAACTCGTCGTTAGCCTCGGCCGTCGGGGCGTACGATATGCAGTTCAGTCTGAATGGCAGTTCATGGAAACCGGTGAGCAATACCGCCTATTACTACACCTTCAACGAGATGAAGAGCGCAGACTCGATCTATGTTTTCTTCTCGAGCAACTTCTTTAAGCAGATGGTGAACCTCGGGATCAGCGATATCAACACCAAAGATCTATTCAACTTTCGCTTTCAGAACACCACATCACCGGAGTCTGGCTGGTATGAATTTTCTACCTCCAACACGCTGATTATCAAACCCCGTGATTTCAGCATCAGTATTATCTCCGATGAATATACTCAGACACCGTCGCGGGAGGGATATGTTGGCAGCGGCGAGTCGGCACTCGATTTCGGCTATATCGTAACCACCAGCGGTAAAACAGCTGCCGACGAAGTGCTGATCAAGGTGACCGGACCCGCGCAGGTGATTGGCGGGCGCTCCTATTGTGTCTTCAGCTCCGATGACGGTAAGGCGAAAGTACCGTTCCCGGCGACACTTTCCTTTATTACCCGCAACGGAGCTACAAAAACCTACGATGCCGGGTGCGATGATAGCTGGCGGGATATGACCGATGCGCTGTGGTTGACCACACCGTGGACTGATATCTCTGGCGAAGTGGGGCAGATGGATAAGACCACAGTCAAATTTTCGATTCCAATGGATAACGCCATTTCGCTGCGTACGGTAGATGATAACGGCTGGTTTGGCGAAGTCAGCGCTTCAGGAGAGATTCATGTTCAGGCGACGTGGCGTAACATTAACTAA", 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"ATGCCTTTACGACGGTTCTCCCCAGGACTGAAAGCCCAGTTTGCCTTCGGCATGGTCTTTTTGTTCGTTCAGCCCGATGCCAGCGCTGCTGACATAAGTGCGCAGCAAATAGGTGGGGTGATTATTCCGCAGGCCTTCAGTCAGGCGCTTCAGGACGGCATGAGCGTCCCGCTCTATATTCATCTCGCCGGTAGCCAGGGTCGCCAGGACGATCAGCGAATCGGCAGCGCTTTTATCTGGCTGGACGATGGACAGCTACGCATCCGGAAAATACAGCTGGAAGAGAGTGAAGATAACGCCAGTGTCAGCGAACAAACTCGACAGCAGCTGATGGCTCTGGCCAACGCCCCGTTCAATGAGGCCCTTACCATCCCCCTGACTGACAACGCGCAGCTGGATCTCAGCTTGCGCCAACTGCTGCTGCAGCTAGTGGTCAAGCGCGAAGCGCTGGGCACCGTACTACGCTCACGTAGCGAAGACATCGGGCAGTCCAGTGTTAACACCCTCAGCAGTAATCTGAGCTATAACTTGGGCGTCTATAACAACCAGTTGCGTAACGGCGGGAGCAACACATCCAGCTATCTGTCGCTGAATAACGTTACTGCACTGCGCGAACATCATGTGGTGCTCGACGGCTCGCTGTACGGGATCGGTAGCGGTCAACAGGACAGTGAATTATATAAAGCGATGTATGAACGCGATTTTGCCGGTCACCGATTTGCCGGTGGAATGCTCGACACCTGGAACTTGCAGTCCTTAGGGCCGATGACCGCCATTTCAGCAGGGAAGATTTACGGCCTTTCCTGGGGAAACCAGGCCAGCTCCACCATCTTCGACAGCAGCCAGTCAGCCACGCCAGTGATCGCCTTTTTACCGGCGGCGGGCGAAGTACATCTCACCCGTGATGGGCGGCTACTAAGCGTTCAGAACTTCACTATGGGCAATCATGAAGTGGATACCCGGGGTCTACCGTACGGGATTTACGATGTGGAAGTTGAGGTGATCGTTAACGGTCGCGTGATCAGCAAACGCACCCAGCGGGTCAATAAGCTGTTTAGCCGGGGGCGCGGCGTCGGTGCACCACTGGCGTGGCAGGTATGGGGCGGTAGCTTTCATATGGATCGCTGGTCGGAAAACGGGAAAAAGACGCGACCAGCTAAAGAGAGTTGGCTAGCAGGTGCCTCGACCTCCGGCTCATTGAGTACGCTTAGCTGGGCGGCAACGGGATATGGATACGATAATCAGGCGGTGGGTGAAACCCGTCTGACGCTGCCGCTTGGGGGGGCGATCAACGTTAACCTGCAAAATATGCTGGCCAGTGACAGCTCATGGAGCAGCATCGGCAGCATCAGCGCCACTCTACCGGGAGGCTTTAGTTCGCTGTGGGTTAATCAGGAAAAAACCCGCATTGGCAATCAATTGCGACGTAGCGATGCCGACAACCGTGCAATCGGCGGCACACTCAACCTGAACTCACTGTGGTCGAAGCTGGGCACATTCAGCATCAGCTACAATGATGACCGCCGTTACAACAGCCATTATTACACGGCAGATTACTATCAAAATGTCTACAGCGGTACCTTTGGTTCGCTTGGCCTGCGGGCCGGTATTCAGCGCTATAACAACGGCGACAGCAACGCCAATACAGGAAAATATATCGCTCTCGATCTCTCGCTACCACTGGGCAACTGGTTTAGCGCAGGGATGACTCATCAAAACGGCTACACCATGGCAAACCTGTCAGCACGCAAACAGTTTGATGAAGGAACCATTCGCACTGTTGGTGCCAATCTGTCACGTGCCATCTCCGGCGATACCGGTGATGACAAAACCCTCAGCGGCGGGGCGTATGCACAATTCGACGCTCGTTACGCCAGCGGAACGCTGAACGTCAATAGCGCGGCGGACGGCTACGTCAATACCAACTTGACCGCCAATGGCAGCGTCGGCTGGCAGGGTAAAAACATTGCTGCCAGCGGGCGGACTGATGGCAACGCTGGGGTGATATTCAACACCGGGCTGGAGGACGACGGTCAGATCAGCGCCAAAATCAACGGGCGGATTTTCCCGCTTAACGGCAAGCGTAACTATCTCCCGCTCTCTCCCTATGGAAGATATGAGGTGGAGTTACAGAACAGCAAAAACTCACTCGACAGTTACGATATCGTCAGCGGCCGCAAAAGTCGTCTGACTCTCTATCCAGGCAATGTCGCTGTCATTGAGCCAGAGGTGAAGCAGATGGTTACCGTCTCCGGTCGTATCCGTGCGGAAGACGGCACACTGCTGGCTAACGCACGGATTAACAACCATATCGGCCGAACCCGAACCGATGAAAACGGCGAGTTTGTCATGGACGTGGATAAGAAATACCCCACTATCGATTTTCGCTACAGTGGCAATAAAACCTGCGAAGTGGCTCTGGAACTCAACCAGGCGCGCGGTGCCGTCTGGGTCGGTGATGTGGTCTGCAGCGGCCTCTCATCGTGGGCGGCGGTGACGCAGACAGGAGAAGAGAATGAGAGTTAA", 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"MPLRRFSPGLKAQFAFGMVFLFVQPDASAADISAQQIGGVIIPQAFSQALQDGMSVPLYIHLAGSQGRQDDQRIGSAFIWLDDGQLRIRKIQLEESEDNASVSEQTRQQLMALANAPFNEALTIPLTDNAQLDLSLRQLLLQLVVKREALGTVLRSRSEDIGQSSVNTLSSNLSYNLGVYNNQLRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIGSGQQDSELYKAMYERDFAGHRFAGGMLDTWNLQSLGPMTAISAGKIYGLSWGNQASSTIFDSSQSATPVIAFLPAAGEVHLTRDGRLLSVQNFTMGNHEVDTRGLPYGIYDVEVEVIVNGRVISKRTQRVNKLFSRGRGVGAPLAWQVWGGSFHMDRWSENGKKTRPAKESWLAGASTSGSLSTLSWAATGYGYDNQAVGETRLTLPLGGAINVNLQNMLASDSSWSSIGSISATLPGGFSSLWVNQEKTRIGNQLRRSDADNRAIGGTLNLNSLWSKLGTFSISYNDDRRYNSHYYTADYYQNVYSGTFGSLGLRAGIQRYNNGDSNANTGKYIALDLSLPLGNWFSAGMTHQNGYTMANLSARKQFDEGTIRTVGANLSRAISGDTGDDKTLSGGAYAQFDARYASGTLNVNSAADGYVNTNLTANGSVGWQGKNIAASGRTDGNAGVIFNTGLEDDGQISAKINGRIFPLNGKRNYLPLSPYGRYEVELQNSKNSLDSYDIVSGRKSRLTLYPGNVAVIEPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENGEFVMDVDKKYPTIDFRYSGNKTCEVALELNQARGAVWVGDVVCSGLSSWAAVTQTGEENES", - "protein_translation_length": 841, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414826.1" - ], - [ - "gene_synonym", - "GeneID:948806" - ], - [ - "gene_synonym", - "ASAP:ABE-0001007" - ], - [ - "gene_synonym", - "b0292" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77188" - ], - [ - "gene_synonym", - "EcoGene:EG13564" - ], - [ - "gene_synonym", - "JW0286" - ], - [ - "gene_synonym", - "ECK0291" - ], - [ - "gene_synonym", - "matC" - ], - [ - "gene_synonym", - "yagY" - ], - [ - "gene_synonym", - "ecpB" - ], - [ - "gene_synonym", - "GI:16128277" - ] - ], - "dna_sequence": "ATGAAAAAGCACCTTCTGCCTCTCGCTCTGCTGTTTTCCGGAATATCTCCGGCCCAGGCGCTGGATGTCGGCGATATATCATCGTTTATGAACAGTGACAGCAGCACGCTGAGCAAAACGATCAAAAACAGTACCGACAGTGGTCGCCTTATCAATATCCGTCTCGAACGGCTCTCTTCACCGCTTGACGACGGGCAGGTTATCTCAATGGACAAGCCGGATGAGTTGCTACTCACTCCCGCCAGCTTGCTGCTACCCGCCCAAGCCAGCGAAGTGATCCGCTTCTTCTATAAGGGACCCGCAGATGAAAAAGAGCGCTACTACCGCATTGTCTGGTTTGATCAGGCCCTCAGTGATGCGCAGCGCGATAATGCCAACCGCAGCGCTGTGGCCACTGCTTCCGCCCGCATCGGCACCATTCTGGTCGTCGCCCCTCGTCAGGCGAACTACCACTTTCAGTACGCCAACGGCTCCCTGACAAATACAGGAAATGCGACGCTGCGGATCCTCGCCTACGGACCTTGCCTGAAAGCCGCCAACGGTAAGGAGTGTAAAGAGAATTACTACCTGATGCCGGGCAAGTCGCGTCGTTTTACCCGCGTGGACACTGCGGATAACAAAGGACGGGTTGCACTTTGGCAGGGTGATAAGTTCATTCCCGTGAAATAG", - "dna_sequence_length": 669, - "functions": [ - "ECP production pilus chaperone" - ], - "id": "CDS_289", - "location": [ - [ - "NC_000913", - 310026, - "-", - 669 - ] - ], - "md5": "5dabb99c722d04f261ddb63bee469bfe", - "parent_gene": "", - "protein_md5": "9a16b865bd37f58d5d9b3ace9b42f85b", - "protein_translation": "MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIKNSTDSGRLINIRLERLSSPLDDGQVISMDKPDELLLTPASLLLPAQASEVIRFFYKGPADEKERYYRIVWFDQALSDAQRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLTNTGNATLRILAYGPCLKAANGKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKFIPVK", - "protein_translation_length": 222, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAA3" - ], - [ - "gene_synonym", - "ASAP:ABE-0001009" - ], - [ - "gene_synonym", - "GeneID:948759" - ], - [ - "gene_synonym", - "b0293" - ], - [ - "gene_synonym", - "NP_414827.1" - ], - [ - "gene_synonym", - "JW0287" - ], - [ - "gene_synonym", - "EcoGene:EG13565" - ], - [ - "gene_synonym", - "matB" - ], - [ - "gene_synonym", - "yagZ" - ], - [ - "gene_synonym", - "ECK0292" - ], - [ - "gene_synonym", - "ecpA" - ], - [ - "gene_synonym", - "GI:16128278" - ] - ], - "dna_sequence": "ATGAAAAAAAAGGTTCTGGCAATAGCTCTGGTAACGGTGTTTACCGGCATGGGTGTGGCGCAGGCTGCTGACGTAACAGCTCAGGCTGTAGCGACCTGGTCGGCAACAGCCAAAAAAGACACCACCAGTAAGCTGGTTGTGACGCCACTCGGTAGCCTGGCGTTCCAGTATGCCGAAGGCATTAAAGGTTTTAACTCACAGAAAGGTCTATTTGACGTGGCTATCGAGGGTGACTCAACGGCTACCGCCTTTAAACTGACCTCACGTCTTATCACCAACACATTAACCCAGTTGGATACCTCAGGTTCCACACTGAATGTGGGCGTGGATTATAACGGCGCGGCAGTCGAAAAAACTGGCGATACCGTGATGATCGATACCGCCAACGGCGTACTGGGCGGCAACCTTAGCCCGCTGGCTAACGGTTACAATGCCAGCAATCGTACCACCGCACAGGATGGTTTCACCTTCTCCATCATCAGCGGTACCACCAATGGTACCACCGCAGTAACAGATTACAGCACTCTACCGGAAGGCATCTGGAGCGGCGACGTTAGCGTACAGTTCGACGCGACCTGGACCAGTTAA", - "dna_sequence_length": 588, - "functions": [ - "ECP pilin" - ], - "id": "CDS_290", - "location": [ - [ - "NC_000913", - 310671, - "-", - 588 - ] - ], - "md5": "0a580c4336e3fcec31ccd3caf5fd059a", - "parent_gene": "", - "protein_md5": "0250374e0b605ee294a7833edc6af233", - "protein_translation": "MKKKVLAIALVTVFTGMGVAQAADVTAQAVATWSATAKKDTTSKLVVTPLGSLAFQYAEGIKGFNSQKGLFDVAIEGDSTATAFKLTSRLITNTLTQLDTSGSTLNVGVDYNGAAVEKTGDTVMIDTANGVLGGNLSPLANGYNASNRTTAQDGFTFSIISGTTNGTTAVTDYSTLPEGIWSGDVSVQFDATWTS", - "protein_translation_length": 195, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5031" - ], - [ - "gene_synonym", - "NP_414828.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P71301" - ], - [ - "gene_synonym", - "ecpR" - ], - [ - "gene_synonym", - "ASAP:ABE-0001011" - ], - [ - "gene_synonym", - "EcoGene:EG14324" - ], - [ - "gene_synonym", - "GI:16128279" - ], - [ - "gene_synonym", - "GeneID:944966" - ], - [ - "gene_synonym", - "ECK0293" - ], - [ - "gene_synonym", - "matA" - ], - [ - "gene_synonym", - "ykgK" - ], - [ - "gene_synonym", - "b0294" - ] - ], - "dna_sequence": "GTGACATGGCAAAGTGATTACAGTAGGGACTATGAGGTTAAAAACCATATGGAATGTCAAAACCGTTCTGATAAATACATCTGGTCTCCCCATGACGCCTACTTCTATAAAGGACTATCTGAACTGATTGTGGATATCGACAGATTAATTTATCTATCGTTGGAGAAAATTAGAAAAGATTTCGTGTTTATCAATCTCAGTACGGATTCTTTATCTGAATTTATAAACCGTGATAATGAATGGTTATCCGCGGTAAAGGGGAAACAGGTCGTATTGATTGCGGCCAGAAAGTCAGAGGCCTTAGCAAATTATTGGTATTACAATAGCAATATTAGGGGCGTGGTATACGCTGGACTGAGTCGTGATATTAGAAAAGAACTGGTCTATGTGATTAATGGCAGGTTCCTGAGAAAAGATATTAAGAAAGATAAAATCACGGACCGGGAAATGGAAATTATCCGCATGACGGCCCAGGGAATGCAACCTAAATCGATTGCCAGAATTGAAAATTGTAGTGTGAAGACAGTGTATACCCATCGGCGTAATGCTGAGGCCAAGCTGTACTCAAAAATATATAAGTTGGTTCAGTAA", - "dna_sequence_length": 591, - "functions": [ - "putative transcriptional regulator for the ecp operon" - ], - "id": "CDS_291", - "location": [ - [ - "NC_000913", - 311336, - "-", - 591 - ] - ], - "md5": "2c8bdd7d7b89d696c73576bdd74730f2", - "parent_gene": "", - "protein_md5": "c76e4213847eeeb77e296dea5ba48e15", - "protein_translation": "MTWQSDYSRDYEVKNHMECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKDFVFINLSTDSLSEFINRDNEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAGLSRDIRKELVYVINGRFLRKDIKKDKITDREMEIIRMTAQGMQPKSIARIENCSVKTVYTHRRNAEAKLYSKIYKLVQ", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5033" - ], - [ - "gene_synonym", - "NP_414829.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001019" - ], - [ - "gene_synonym", - "GeneID:944962" - ], - [ - "gene_synonym", - "b0295" - ], - [ - "gene_synonym", - "ECK0294" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P56257" - ], - [ - "gene_synonym", - "GI:16128280" - ], - [ - "gene_synonym", - "EcoGene:EG14325" - ], - [ - "gene_synonym", - "ykgL" - ] - ], - "dna_sequence": "ATGCAGGCTGCGCCGCAAAGGGAGGAGACTGAGTGGCGTGTTCAGTCTAAAAGAGGGTTGATGCCAGCATACAGGGGCGAAGCTGGTCAACAAGTCAACATTAAGATAATGGAATATTCGGAGAGAAACGTCAGGCAGTTGGCCTCAAATGAACAGGAAGAATATATCCCCAGGAAAATTAATGTTGGTGTTATAAACACACCAACATTAATCCGATCTGATTATTAA", - "dna_sequence_length": 228, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_292", - "location": [ - [ - "NC_000913", - 312112, - "+", - 228 - ] - ], - "md5": "96af576be5b5e04bf2ffb7e48e4ef560", - "parent_gene": "", - "protein_md5": "043dcc3b0fa38e1433ad27639e6f71d5", - "protein_translation": "MQAAPQREETEWRVQSKRGLMPAYRGEAGQQVNIKIMEYSERNVRQLASNEQEEYIPRKINVGVINTPTLIRSDY", - "protein_translation_length": 75, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5034" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q2EEQ2" - ], - [ - "gene_synonym", - "GeneID:1450238" - ], - [ - "gene_synonym", - "ECK0295" - ], - [ - "gene_synonym", - "GI:94541137" - ], - [ - "gene_synonym", - "rpmJ2" - ], - [ - "gene_synonym", - "b4506" - ], - [ - "gene_synonym", - "YP_588437.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0285027" - ], - [ - "gene_synonym", - "ykgO" - ], - [ - "gene_synonym", - "EcoGene:EG14432" - ] - ], - "dna_sequence": "ATGAAAGTTCTTAACTCTCTGCGTACCGCAAAAGAACGCCATCCAGACTGTCAGATTGTGAAGCGAAAAGGACGGCTATATGTGATTTGTAAATCTAATCCACGTTTTAAGGCCGTTCAGGGTCGTAAGAAAAAACGTTGA", - "dna_sequence_length": 141, - "functions": [ - "RpmJ-like protein" - ], - "id": "CDS_293", - "location": [ - [ - "NC_000913", - 312514, - "-", - 141 - ] - ], - "md5": "fd8d66224be10f4fd1b7e78a54a368f1", - "parent_gene": "", - "protein_md5": "9515c84ce0e80ff58be67c618687cc3d", - "protein_translation": "MKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKKKR", - "protein_translation_length": 46, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5035" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7N1" - ], - [ - "gene_synonym", - "b0296" - ], - [ - "gene_synonym", - "GeneID:944960" - ], - [ - "gene_synonym", - "ECK0296" - ], - [ - "gene_synonym", - "ASAP:ABE-0001021" - ], - [ - "gene_synonym", - "NP_414830.1" - ], - [ - "gene_synonym", - "GI:16128281" - ], - [ - "gene_synonym", - "EcoGene:EG14326" - ], - [ - "gene_synonym", - "ykgM" - ], - [ - "gene_synonym", - "rpmE2" - ] - ], - "dna_sequence": "ATGAAGCCCAATATCCATCCTGAGTATCGTACTGTGGTGTTCCACGACACCAGTGTTGATGAGTACTTTAAAATCGGCTCGACTATCAAAACAGACCGTGAGATTGAGCTGGATGGCGTAACGTATCCATACGTGACAATTGATGTCTCTTCTAAATCGCACCCGTTCTATACAGGGAAGCTGAGAACAGTGGCATCAGAAGGAAATGTTGCACGATTCACCCAACGTTTTGGTCGTTTTGTTAGCACGAAAAAGGGGGCGTGA", - "dna_sequence_length": 264, - "functions": [ - "50S ribosomal protein L31 type B", - "alternative zinc-limitation L31 protein" - ], - "id": "CDS_294", - "location": [ - [ - "NC_000913", - 312777, - "-", - 264 - ] - ], - "md5": "a5c2a25e3138d4b8bc5d9173600f3b58", - "parent_gene": "", - "protein_md5": "7d0734f54a1b7a2cf2bdb32fc5b937b2", - "protein_translation": "MKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYPYVTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRFVSTKKGA", - "protein_translation_length": 87, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ykgR" - ], - [ - "gene_synonym", - "GI:226524699" - ], - [ - "gene_synonym", - "EcoGene:EG14476" - ], - [ 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"ATGTCACATTATAAAACAGGTCATAAACAACCACGATTTCGTTATTCAGTTCTGGCCCGCTGCGTGGCGTGGGCAAATATCTCTGTTCAGGTTCTTTTTCCACTCGCTGTCACCTTTACCCCAGTAATGGCGGCACGTGCGCAGCATGCGGTTCAGCCACGGTTGAGCATGGGAAATACTACGGTAACTGCTGATAATAACGTGGAGAAAAATGTCGCGTCGTTTGCCGCAAATGCCGGGACATTTTTAAGCAGTCAGCCAGATAGCGATGCGACACGTAACTTTATTACCGGAATGGCCACAGCTAAAGCTAACCAGGAAATACAGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGATAAAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGCCGACAAATATGTTGTTCACTCAGGGGGCAATACATCGTACAGACGATCGTACTCAGTCAAATATTGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGATGTATGAACAGTATTATGGCGATGAAGTCGGGCTGTTTGGTAAAGATAAGCGCCAGAAAGACCCGCATGCTATTTCTGCCGAGGTGACCTATACGCCAGTGCC", - "dna_sequence_length": 872, - "id": "CDS_297", - "location": [ - [ - "NC_000913", - 314357, - "+", - 872 - ] - ], - "md5": 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"ATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA", - "dna_sequence_length": 300, - "functions": [ - "IS3 transposase A" - ], - "id": "CDS_298", - "location": [ - [ - "NC_000913", - 315291, - "+", - 300 - ] - ], - "md5": "2b8299a430402ee6e8586f7af8039b36", - "parent_gene": "", - "protein_md5": "03ddb941ec5f7556890ce78365da94d2", - "protein_translation": "MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK", - "protein_translation_length": 99, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0299" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF79" - ], - [ - "gene_synonym", - "EcoGene:EG40006" - ], - [ - "gene_synonym", - "insF1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001030" - ], - [ - "gene_synonym", - "GI:16128284" - ], - [ - "gene_synonym", - "NP_414833.1" - ], - [ - "gene_synonym", - "ECK0299" - ], - [ - "gene_synonym", - "GeneID:944948" - ] - ], - "dna_sequence": "ATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGACTGAGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAG", - "dna_sequence_length": 867, - "functions": [ - "IS3 transposase B" - ], - "id": "CDS_299", - "location": [ - [ - "NC_000913", - 315587, - "+", - 867 - ] - ], - "md5": "f16497ced719778b623ae488d3ff6549", - "parent_gene": "", - "protein_md5": "d747daab607a7e429605aaffca2556f8", - "protein_translation": "MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA", - "protein_translation_length": 288, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001032" - ], - [ - "gene_synonym", - "ECK0300" - ], - [ - "gene_synonym", - "JW5037" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77601" - ], - [ - "gene_synonym", - "GeneID:944956" - ], - [ - "gene_synonym", - "EcoGene:EG13381" - ], - [ - "gene_synonym", - "ykgA" - ], - [ - "gene_synonym", - "b0300" - ] - ], - "dna_sequence": "GTGCGATATGACAAAGAATTAACGGAGAATGAGATGATCAGGCAGAAGATTCTACAGCAGCTCCTGGAGTGGATTGAGTGCAATCTTGAGCACCCTATTTCAATCGAAGATATCGCACAGAAATCTGGCTACAGCAGACGCAACATCCAGCTTCTGTTCCGAAATTTCATGCATGTGCCTTTGGGAGAATACATTCGCAAACGAAGGCTTTGTCGTGCCGCCATTCTTGTCCGGCTCACCGCGAAATCTATGCTTGATATTGCACTCTCTTTGCATTTTGATTCACAGCAGTCATTCAGCCGCGAATTTAAAAAGTTATTCGGCTGCTCTCCCCGTGAATACCGCCACCGTGATTATTGGGATCTCGCAAATATCTTCCCTTCTTTTTTAATACGTCAACAGCAAAAGACGGAGTGTAGATTAATCAACTTTCCTGAGACACCTATTTTTGGCAACTCATTTAAATATGACATTGAAGTGTCGAATAAATCACCGGATGAAGAAGTCAAACTACGACGTCATCATTTAGCCAGATGTATGAAGAATTTTAAGACGGATATCTATTTCGTTTCCACGTTTGAACCGTCAACAAAATCGGTCGATTTGCTCACGGTTGAAACTTTTGCTGGTACGGTATGTGAATATGCTGACATGCCAAAAGAGTGGACAACGACCCGAGGACTT", - "dna_sequence_length": 684, - "id": "CDS_300", - "location": [ - [ - "NC_000913", - 317169, - "-", - 684 - ] - ], - "md5": "ecfb219150d53659872e16bd6f44995f", - "parent_gene": "", - "protein_md5": "bf3a51cbd1c3b31b14b03438b71a474b", - "protein_translation": "VRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQLLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFSREFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKTECRLINFPETPIFGNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSVDLLTVETFAGTVCEYADMPKEWTTTRGL", - "protein_translation_length": 228, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ykgQ" - ], - [ - "gene_synonym", - "ECK4454" - ], - [ - "gene_synonym", - "b4631" - ], - [ - "gene_synonym", - "GeneID:5625557" - ], - [ - "gene_synonym", - "EcoGene:EG14443" - ] - ], - "dna_sequence": "GATTTCTCACTGACAGATAAAGAAATGGCACAAATTAGTTCGCTTGATTTGGGTTATGTTGGGGAGTCGGTAAAACATTTTAATCCTGAATTTGTTCGTGGTTGTCTTGCTGTAAAAATACATGATTGA", - "dna_sequence_length": 129, - "id": "CDS_301", - "location": [ - [ - "NC_000913", - 317439, - "+", - 129 - ] - ], - "md5": "720ec5f5268f2c1ef5133b542ad6d516", - "parent_gene": "", - "protein_md5": "fa9a445cb1c4c81e086d8d02cf89baa0", - "protein_translation": "DFSLTDKEMAQISSLDLGYVGESVKHFNPEFVRGCLAVKIHD", - 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"ATGGAAAAATACCTGCACCTGTTAAGTCGGGGAGATAAAATTGGCCTGACATTGATTCGTCTGAGTATTGCAATTGTTTTTATGTGGATTGGGTTATTAAAGTTTGTCCCTTACGAGGCAGACAGCATTACACCATTCGTCGCAAACAGTCCACTAATGTCGTTCTTTTATGAACACCCGGAAGACTATAAACAGTATCTGACTCACGAAGGCGAATACAAACCAGAAGCAAGGGCATGGCAAACGGCCAATAATACCTATGGTTTTTCCAACGGTCTTGGCGTCGTGGAGGTGATTATTGCTCTGCTGGTTTTGGCTAATCCTGTCAATCGCTGGTTAGGTTTATTGGGAGGACTGATGGCATTTACCACGCCGCTGGTAACACTCTCATTTTTAATCACCACCCCGGAGGCATGGGTACCCGCATTGGGTGACGCTCATCATGGTTTCCCTTATTTATCCGGTGCTGGTCGCCTGGTATTGAAAGATACTCTGATGCTGGCAGGTGCAGTCATGATAATGGCAGATTCGGCGCGGGAAATTCTTAAACAACGCAGTAATGAATCCAGTTCAACGTTAAAAACTGAATATTGA", - "dna_sequence_length": 594, - "functions": [ - "reactive chlorine species (RCS) stress resistance inner membrane protein" - ], - "id": "CDS_302", - "location": [ - [ - "NC_000913", - 318319, - "-", - 594 - ] - ], - "md5": "e8cc28f0ba07ff50b94a43fbe9c4b531", - "parent_gene": "", - "protein_md5": "7bc26ff03631238942a079fd9a526a14", - "protein_translation": "MEKYLHLLSRGDKIGLTLIRLSIAIVFMWIGLLKFVPYEADSITPFVANSPLMSFFYEHPEDYKQYLTHEGEYKPEARAWQTANNTYGFSNGLGVVEVIIALLVLANPVNRWLGLLGGLMAFTTPLVTLSFLITTPEAWVPALGDAHHGFPYLSGAGRLVLKDTLMLAGAVMIMADSAREILKQRSNESSSTLKTEY", - "protein_translation_length": 197, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111111" - ], - [ - "gene_synonym", - "ECK0302" - ], - [ - "gene_synonym", - "EcoGene:EG14278" - ], - [ - "gene_synonym", - "NP_414837.2" - ], - [ - "gene_synonym", - "GeneID:945658" - ], - [ - "gene_synonym", - "JW5039" - ], - [ - "gene_synonym", - "ASAP:ABE-0001043" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75687" - ], - [ - "gene_synonym", - "ykgB" - ], - [ - "gene_synonym", - "ykgI" - ], - [ - "gene_synonym", - "rclB" - ], - [ - "gene_synonym", - "b0303" - ] - ], - "dna_sequence": "ATGTTTAAAAAATCTGTTTTATTTGCAACACTATTATCTGGCGTTATGGCATTTTCCACCAATGCAGATGATAAAATAATTCTGAAACATATCAGCGTCTCGTCAGTATCAGCATCACCGACAGTTCTGGAGGATACCATTGCTGATATAGCCAGAAAATATAATGCTTCATCCTGGAAAGTCACATCGATGCGAATTGATAATAATTCAACCGCAACAGCAGTATTGTATAAATAA", - "dna_sequence_length": 237, - "functions": [ - "reactive chlorine species (RCS) stress resistance periplasmic protein" - ], - "id": "CDS_303", - "location": [ - [ - "NC_000913", - 318567, - "-", - 237 - ] - ], - "md5": "1cf83f069e1e3ebc2d71528aa9320193", - "parent_gene": "", - "protein_md5": "4deb0a840e6405fdfad87f0936a60c19", - "protein_translation": "MFKKSVLFATLLSGVMAFSTNADDKIILKHISVSSVSASPTVLEDTIADIARKYNASSWKVTSMRIDNNSTATAVLYK", - "protein_translation_length": 78, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0303" - ], - [ - "gene_synonym", - "GI:90111112" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77212" - ], - [ - "gene_synonym", - "ASAP:ABE-0001048" - ], - [ - "gene_synonym", - "NP_414838.2" - ], - [ - "gene_synonym", - "JW5040" - ], - [ - "gene_synonym", - "ykgC" - ], - [ - "gene_synonym", - "EcoGene:EG13580" - ], - [ - "gene_synonym", - "b0304" - ], - [ - "gene_synonym", - "GeneID:946092" - ], - [ - "gene_synonym", - "rclA" - ] - ], - "dna_sequence": "ATGAATAAATATCAGGCAGTGATTATTGGTTTTGGCAAGGCTGGAAAAACATTAGCCGTCACGCTGGCAAAAGCAGGTTGGCGAGTGGCTCTCATCGAACAATCAAATGCAATGTATGGCGGGACCTGTATTAATATCGGCTGCATCCCAACCAAAACATTGGTTCATGACGCACAGCAGCACACAGATTTTGTCCGTGCCATACAGCGTAAAAATGAAGTGGTTAATTTTTTACGTAATAAGAATTTTCATAATCTTGCGGATATGCCCAATATCGACGTGATCGACGGCCAGGCGGAGTTTATCAATAATCATAGCCTGCGTGTTCATCGGCCTGAGGGAAATCTGGAAATTCATGGCGAGAAAATTTTTATTAATACCGGTGCACAAACCGTGGTTCCGCCAATTCCTGGAATTACCACCACGCCAGGAGTATATGACAGCACCGGATTACTTAATCTAAAAGAATTGCCTGGGCATTTAGGTATTTTGGGCGGCGGATATATTGGCGTTGAGTTCGCCTCTATGTTCGCTAATTTTGGCAGCAAGGTAACCATTTTAGAAGCAGCTTCGCTGTTTTTGCCTCGGGAAGATCGGGATATTGCTGATAATATCGCGACGATTTTACGCGATCAGGGCGTCGATATTATCCTCAATGCCCATGTGGAGCGAATCAGTCACCATGAAAATCAAGTGCAAGTGCATAGCGAGCACGCCCAACTGGCGGTGGATGCACTGTTAATAGCTTCCGGTCGTCAACCGGCTACCGCTTCGTTACATCCAGAAAATGCCGGTATCGCAGTAAACGAGCGCGGGGCAATTGTCGTTGACAAGCGATTACATACCACCGCAGACAATATTTGGGCGATGGGAGATGTTACCGGCGGGCTGCAATTTACTTACATATCACTGGATGATTACCGCATTGTACGTGATGAGTTACTGGGTGAAGGCAAACGTAGTACTGATGATCGGAAAAATGTGCCTTATTCCGTATTTATGACACCGCCCCTGTCCAGGGTTGGTATGACAGAAGAACAAGCCAGAGAGAGTGGTGCTGATATTCAGGTGGTGACATTGCCTGTAGCTGCAATTCCGCGTGCCAGAGTGATGAATGATACTCGTGGGGTATTAAAAGCGATTGTTGATAATAAAACCCAACGTATGTTAGGGGCATCACTGCTGTGTGTTGACTCCCACGAGATGATCAATATAGTGAAAATGGTGATGGATGCCGGGCTGCCTTATAGCATATTACGCGATCAGATATTTACTCATCCGTCGATGAGCGAATCACTCAATGATCTATTTTCATTAGTCAAATAA", 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- "ASAP:ABE-0001054" - ], - [ - "gene_synonym", - "ECK0304" - ], - [ - "gene_synonym", - "rclR" - ], - [ - "gene_synonym", - "GeneID:945616" - ], - [ - "gene_synonym", - "GI:16128290" - ], - [ - "gene_synonym", - "ykgD" - ], - [ - "gene_synonym", - "EcoGene:EG13581" - ], - [ - "gene_synonym", - "b0305" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77379" - ], - [ - "gene_synonym", - "JW0298" - ] - ], - "dna_sequence": "ATGGATGCCCTTAGCCGTTTGTTGATGCTTAACGCTCCACAAGGAACGATCGATAAGAATTGCGTGTTAGGAAGTGACTGGCAGCTTCCACATGGTGCCGGGGAATTATCGGTTATTCGTTGGCATGCGTTAACGCAAGGAGCGGCGAAGCTGGAAATGCCGACGGGGGAGATTTTTACATTACGCCCGGGAAATGTGGTCCTGCTACCACAAAATTCAGCTCATCGCCTGAGTCATGTCGATAATGAATCGACCTGTATTGTCTGCGGCACTCTTCGGTTGCAACATTCGGCGCGTTATTTTTTAACGTCTTTGCCGGAAACGCTGTTTTTAGCACCGGTTAACCACAGCGTGGAATATAACTGGCTGAGGGAGGCGATCCCGTTTTTACAACAGGAATCCAGATCGGCAATGCCGGGAGTGGATGCACTGTGTAGCCAGATCTGCGCTACATTCTTTACCCTCGCGGTGCGTGAGTGGATTGCACAGGTTAATACTGAGAAAAACATTCTCAGTTTGCTTCTGCATCCACGTCTTGGTGCGGTAATACAGCAAATGCTGGAAATGCCAGGACACGCCTGGACCGTCGAATCGCTGGCCAGCATCGCTCACATGTCCCGGGCAAGTTTTGCCCAGCTTTTCCGTGATGTTTCCGGAACCACGCCGCTGGCTGTATTAACAAAGTTGCGTCTACAAATAGCGGCCCAGATGTTTTCCCGGGAAACGCTCCCTGTTGTGGTGATCGCTGAGTCAGTAGGCTATGCCAGTGAATCATCTTTTCACAAGGCGTTTGTCCGCGAGTTTGGTTGTACCCCGGGAGAATATCGGGAAAGGGTCAGACAGCTTGCACCCTGA", - "dna_sequence_length": 855, - "functions": [ - "reactive chlorine species (RCS)-specific activator of the rcl genes" - ], - "id": "CDS_305", - "location": [ - [ - "NC_000913", - 320227, - "+", - 855 - ] - ], - "md5": "781d70f06a344596b541c3f60acc3234", - "parent_gene": "", - "protein_md5": "685e6d0e68bdc2b72dd55f5c1470257c", - "protein_translation": "MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAKLEMPTGEIFTLRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARYFLTSLPETLFLAPVNHSVEYNWLREAIPFLQQESRSAMPGVDALCSQICATFFTLAVREWIAQVNTEKNILSLLLHPRLGAVIQQMLEMPGHAWTVESLASIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSRETLPVVVIAESVGYASESSFHKAFVREFGCTPGEYRERVRQLAP", - "protein_translation_length": 284, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77252" - ], - [ - "gene_synonym", - "ECK0305" - ], - [ - "gene_synonym", - "ASAP:ABE-0001058" - ], - [ - "gene_synonym", - "GeneID:948438" - ], - [ - "gene_synonym", - "NP_414840.1" - ], - [ - "gene_synonym", - "ykgE" - ], - [ - "gene_synonym", - "GI:16128291" - ], - [ - "gene_synonym", - "JW5041" - ], - [ - "gene_synonym", - "b0306" - ], - [ - "gene_synonym", - "EcoGene:EG13582" - ] - ], - "dna_sequence": "GTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAACTCGGCTGTCGCGTAAATTTCCCGGAGAAACAGGGATGCTGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGGCTCTTGCACCTATGCCGTAAAAAGTTACCCGACGTATCTGGCGGATGAACCTGAATGGGCATCACGTGCCGCAAAGGTTGCCGCGCGTATGCAGGATCTCACCTCTTTTATTGTTAATAAATTAGGGGTAGTCGATGTAGGTGCCAGTTTGCAAGGGAGAGCGGTGTATCACCCATCTTGTAGCCTGGCCCGTAAGCTGGGAGTGAAGGACGAGCCACTTACGCTGCTGAAAAATGTGCGTGGACTGGAGCTGTTGACCTTTGCTGAACAGGATACCTGCTGCGGATTTGGCGGCACGTTCTCGGTCAAAATGGCCGAAATATCCGGCGAGATGGTGAAAGAAAAGGTTGCGCACCTGATGGAAGTCCGCCCTGAGTATTTAATTGGTGCTGACGTGAGTTGCCTGCTAAACATCAGTGGGCGATTACAACGGGAAGGGCAGAAAGTCAAAGTGATGCATATTGCTGAAGTGTTGATGAGCCGCTGA", - "dna_sequence_length": 720, - "functions": [ - "cysteine-rich LutA family protein", - "putative electron transport chain YkgEFG component" - ], - "id": "CDS_306", - "location": [ - [ - "NC_000913", - 321608, - "+", - 720 - ] - ], - "md5": "e2587411f09033187c14c2c45c04933c", - "parent_gene": "", - "protein_md5": "4f40db343d8fe1a2490bc5670cc1295e", - "protein_translation": "MNVNFFVTCIGDALKSRMARDSVLLLEKLGCRVNFPEKQGCCGQPAINSGYIKEAIPGMKNLIAALEDNDDPIISPAGSCTYAVKSYPTYLADEPEWASRAAKVAARMQDLTSFIVNKLGVVDVGASLQGRAVYHPSCSLARKLGVKDEPLTLLKNVRGLELLTFAEQDTCCGFGGTFSVKMAEISGEMVKEKVAHLMEVRPEYLIGADVSCLLNISGRLQREGQKVKVMHIAEVLMSR", - "protein_translation_length": 239, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944980" - ], - [ - "gene_synonym", - "EcoGene:EG13583" - ], - [ - "gene_synonym", - "JW0300" - ], - [ - "gene_synonym", - "ECK0306" - ], - [ - "gene_synonym", - "ASAP:ABE-0001060" - ], - [ - "gene_synonym", - "NP_414841.1" - ], - [ - "gene_synonym", - "GI:16128292" - ], - [ - "gene_synonym", - "ykgF" - ], - [ - "gene_synonym", - "b0307" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77536" - ] - ], - "dna_sequence": "ATGTCGATCAAAACCAGTAATACAGATTTTAAGACACGCATCCGTCAGCAAATTGAAGATCCGATCATGCGCAAAGCGGTGGCAAACGCGCAGCAGCGTATTGGGGCAAATCGGCAAAAAATGGTCGATGAATTGGGGCACTGGGAGGAGTGGCGCGATCGGGCCGCCCAGATACGTGATCATGTTCTGAGTAATCTCGACGCTTATCTGTACCAGCTCTCAGAAAAAGTGACGCAAAACGGCGGTCACGTCTATTTTGCAAGAACCAAAGAAGACGCTACCCGCTACATTTTACAGGTTGCCCAACGCAAAAATGCCCGGAAGGTGGTGAAATCTAAATCGATGGTGACCGAAGAGATTGGTGTCAATCATGTGTTGCAGGATGCTGGCATTCAGGTGATTGAAACCGATCTGGGTGAATATATTCTCCAGCTGGATCAAGATCCGCCATCTCATGTTGTGGTCCCGGCAATTCATAAAGATCGCCATCAGATCCGTCGAGTGCTACACGAACGTCTGGGCTATGAGGGGCCGGAAACGCCTGAAGCGATGACCTTATTCATCCGGCAAAAAATCCGCGAAGATTTCCTCAGTGCTGAAATAGGTATTACCGGCTGTAATTTCGCGGTGGCAGAGACCGGTTCGGTATGCCTGGTGACCAATGAAGGTAATGCGCGAATGTGTACCACGCTGCCTAAAACGCATATTGCAGTGATGGGAATGGAGCGTATTGCCCCCACGTTTGCCGAGGTAGATGTATTGATCACCATGCTGGCGCGCAGTGCCGTTGGTGCACGTTTGACGGGATACAACACCTGGCTGACAGGACCGCGCGAAGCTGGGCACGTTGATGGTCCTGAAGAGTTTCATCTGGTTATTGTCGATAACGGGCGTTCTGAGGTGCTGGCCTCTGAATTTCGGGATGTGCTGCGCTGTATTCGCTGCGGGGCTTGTATGAATACTTGTCCGGCATATCGCCATATTGGCGGTCATGGATATGGCTCTATTTATCCAGGGCCAATTGGTGCGGTGATTTCTCCGCTACTTGGCGGCTATAAAGATTTTAAAGATTTACCCTACGCCTGCTCTTTATGCACAGCTTGTGACAACGTGTGTCCGGTGCGTATTCCGCTGTCAAAACTGATTTTGCGTCATCGTCGGGTGATGGCTGAAAAAGGGATCACCGCAAAAGCAGAGCAACGGGCGATAAAAATGTTCGCTTATGCCAATAGTCATCCAGGATTGTGGAAAGTCGGGATGATGGCCGGTGCTCATGCGGCAAGCTGGTTTATCAATGGCGGCAAAACACCACTCAAATTTGGCGCGATTAGCGACTGGATGGAAGCACGCGATCTTCCTGAAGCTGACGGAGAGAGTTTCCGTAGTTGGTTTAAGAAACATCAGGCGCAGGAGAAAAAGAATGGATAA", - "dna_sequence_length": 1428, - "functions": [ - "ferridoxin-like LutB family protein", - "putative electron transport chain YkgEFG component" - ], - "id": "CDS_307", - "location": [ - [ - "NC_000913", - 322338, - "+", - 1428 - ] - ], - "md5": "c9b8c21866391c3d01994228ffe77190", - "parent_gene": "", - "protein_md5": "67ec7930c2d984a92d1d51dfc63193d3", - "protein_translation": "MSIKTSNTDFKTRIRQQIEDPIMRKAVANAQQRIGANRQKMVDELGHWEEWRDRAAQIRDHVLSNLDAYLYQLSEKVTQNGGHVYFARTKEDATRYILQVAQRKNARKVVKSKSMVTEEIGVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVPAIHKDRHQIRRVLHERLGYEGPETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCLVTNEGNARMCTTLPKTHIAVMGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTGPREAGHVDGPEEFHLVIVDNGRSEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYGSIYPGPIGAVISPLLGGYKDFKDLPYACSLCTACDNVCPVRIPLSKLILRHRRVMAEKGITAKAEQRAIKMFAYANSHPGLWKVGMMAGAHAASWFINGGKTPLKFGAISDWMEARDLPEADGESFRSWFKKHQAQEKKNG", - "protein_translation_length": 475, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111113" - ], - [ - "gene_synonym", - "NP_414842.4" - ], - [ - "gene_synonym", - "ECK0307" - ], - [ - "gene_synonym", - "ASAP:ABE-0001062" - ], - [ - "gene_synonym", - "GeneID:945906" - ], - [ - "gene_synonym", - "b0308" - ], - [ - "gene_synonym", - "ykgG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77433" - ], - [ - "gene_synonym", - "JW5042" - ], - [ - "gene_synonym", - "EcoGene:EG13584" - ] - ], - "dna_sequence": "ATGGATAATCGAGGCGAATTTTTGAATAACGTTGCTCAGGCACTGGGTCGCCCGCTGCGACTTGAACCGCAAGCAGAAGATGCGCCGCTTAACAACTATGCTAACGAGCGGCTTACCCAACTTAACCAACAGCAGCGCTGTGACGCGTTTATTCAGTTTGCCAGCGATGTTATGTTGACGCGCTGTGAGCTGACCAGCGAGGCGAAGGCGGCAGAAGCTGCAATACGTCTGTGTAAAGAGCTGGGAGATCAGTCGGTCGTGATTAGCGGTGACACGAGGCTGGAGGAATTGGGGATTAGCGAACGTTTGCAGCAGGAATGCAATGCCGTTGTTTGGGATCCGGCGAAAGGTGCCGAGAATATCTCGCAGGCAGAGCAGGCTAAAGTGGGTGTTGTGTATGCTGAATATGGTTTAACCGAATCGGGAGGCGTGGTTCTTTTTTCCGCCGCCGAGCGCGGGCGTTCATTGAGCCTGCTCCCGGAATATTCTCTTTTTATCCTGCGTAAAAGCACTATCCTGCCGCGTGTAGCGCAACTCGCAGAAAAATTGCATCAGAAAGCGCAGGCCGGTGAACGAATGCCTTCCTGCATTAACATCATTAGCGGCCCCAGTTCAACGGCGGATATTGAGCTTATCAAAGTCGTCGGAGTTCATGGCCCGGTGAAAGCGGTGTATCTGATTATTGAGGATTGTTGA", - "dna_sequence_length": 696, - "functions": [ - "LutC family protein", - "putative electron transport chain YkgEFG component" - ], - "id": "CDS_308", - "location": [ - [ - "NC_000913", - 323758, - "+", - 696 - ] - ], - "md5": "bef003ca37aeff76492033a69eaa403c", - "parent_gene": "", - "protein_md5": "5606b0ad845085d2901679303e1134de", - "protein_translation": "MDNRGEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQQRCDAFIQFASDVMLTRCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISERLQQECNAVVWDPAKGAENISQAEQAKVGVVYAEYGLTESGGVVLFSAAERGRSLSLLPEYSLFILRKSTILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVHGPVKAVYLIIEDC", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77180" - ], - [ - "gene_synonym", - "JW0302" - ], - [ - "gene_synonym", - "NP_414844.1" - ], - [ - "gene_synonym", - "ECK0308" - ], - [ - "gene_synonym", - "ASAP:ABE-0001066" - ], - [ - "gene_synonym", - "GI:16128295" - ], - [ - "gene_synonym", - "b0310" - ], - [ - "gene_synonym", - "GeneID:947513" - ], - [ - "gene_synonym", - "ykgH" - ], - [ - "gene_synonym", - "EcoGene:EG13585" - ] - ], - "dna_sequence": "ATGCGTGAACAAATCAAACAGGATATCGATCTGATTGAGATTTTATTTTATCTGAAGAAAAAGATTCGTGTTATCCTTTTTATTATGGCTATATGTATGGCTATGGTGCTGTTGTTTCTGTATATCAATAAAGACAATATAAAAGTGATTTACAGCCTAAAAATAAACCAGACAACGCCAGGTATACTTGTTAGCTGTGATAGCAATAATAATTTTGCCTGTCAGACTACAATGACTGAAGATGTTATTCAGCGAATTACTACATTTTTTCACACCAGCCCAGATGTCAAGAACAGAGAAATAAGGCTGGAATGGTCAGGAGATAAGAGAGCTTTACCAACTGCTGAAGAGGAAATATCTCGCGTGCAGGCCTCTATTATCAAATGGTATGCGTCAGAATATCATAATGGCAGGCAAGTTCTCGATGAGATACAAACGCCTTCAGCAATTAACAGTGAGCTTTATACAAAAATGATATACCTGACCAGGAACTGGTCATTGTATCCGAACGGTGATGGCTGTGTAACTATAAGCTCACCAGAAATAAAAAATAAATACCCTGCTGCCATTTGCCTGGCTCTGGGATTTTTTCTAAGCATTGTAATTTCTGTAATGTTTTGCCTTGTCAAAAAAATGGTAGATGAATACCAACAAAACTCTGGGCAGTAA", - "dna_sequence_length": 669, - "functions": [ - "putative inner membrane protein" - ], - "id": "CDS_309", - "location": [ - [ - "NC_000913", - 325364, - "-", - 669 - ] - ], - "md5": "cff94e265b4d6f64d2a19fab581d9494", - "parent_gene": "", - "protein_md5": "bf13e8e1e6a015643c8cea1ea7d10c19", - "protein_translation": "MREQIKQDIDLIEILFYLKKKIRVILFIMAICMAMVLLFLYINKDNIKVIYSLKINQTTPGILVSCDSNNNFACQTTMTEDVIQRITTFFHTSPDVKNREIRLEWSGDKRALPTAEEEISRVQASIIKWYASEYHNGRQVLDEIQTPSAINSELYTKMIYLTRNWSLYPNGDGCVTISSPEIKNKYPAAICLALGFFLSIVISVMFCLVKKMVDEYQQNSGQ", - "protein_translation_length": 222, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0311" - ], - [ - "gene_synonym", - "ASAP:ABE-0001070" - ], - [ - "gene_synonym", - "JW0303" - ], - [ - "gene_synonym", - "EcoGene:EG10109" - ], - [ - "gene_synonym", - "ECK0309" - ], - [ - "gene_synonym", - "GI:16128296" - ], - [ - "gene_synonym", - "betA" - ], - [ - "gene_synonym", - "NP_414845.1" - ], - [ - "gene_synonym", - "GeneID:945716" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17444" - ] - ], - "dna_sequence": "TTGCAATTTGACTACATCATTATTGGTGCCGGCTCAGCCGGCAACGTTCTCGCTACCCGTCTGACTGAAGATCCGAATACCTCCGTGCTGCTGCTTGAAGCGGGCGGCCCGGACTATCGCTTTGACTTCCGCACCCAGATGCCCGCTGCCCTGGCATTCCCGCTACAGGGTAAACGCTACAACTGGGCCTATGAAACGGAACCTGAACCGTTTATGAATAACCGCCGCATGGAGTGCGGACGCGGTAAAGGTCTGGGTGGATCGTCGCTGATCAACGGCATGTGCTACATCCGTGGCAATGCGCTGGATCTCGATAACTGGGCGCAAGAACCCGGTCTGGAGAACTGGAGCTACCTCGACTGCCTGCCCTACTACCGCAAGGCCGAGACTCGCGATATGGGTGAAAACGACTATCACGGCGGTGATGGCCCGGTGAGCGTCACTACCTCCAAACCCGGCGTCAATCCGCTGTTTGAAGCGATGATTGAAGCGGGCGTGCAGGCGGGCTACCCGCGCACGGACGATCTCAACGGTTATCAGCAGGAAGGTTTTGGTCCGATGGATCGCACCGTCACGCCGCAGGGCCGTCGCGCCAGCACCGCGCGTGGCTATCTCGATCAGGCCAAATCGCGTCCTAACCTGACCATTCGTACTCACGCTATGACCGATCACATCATTTTTGACGGCAAACGCGCGGTGGGCGTCGAATGGCTGGAAGGCGACAGCACCATCCCAACCCGCGCAACGGCCAACAAAGAAGTGCTGTTATGTGCAGGCGCGATTGCCTCACCGCAGATCCTGCAACGCTCCGGCGTCGGCAACGCTGAACTGCTGGCGGAGTTTGATATTCCGCTGGTGCATGAATTACCCGGCGTCGGCGAAAATCTTCAGGATCATCTGGAGATGTATCTGCAATATGAGTGCAAAGAACCGGTTTCCCTCTACCCTGCCCTGCAGTGGTGGAACCAGCCGAAAATCGGTGCGGAGTGGCTGTTTGGCGGCACTGGCGTTGGTGCCAGCAACCACTTTGAAGCAGGTGGATTTATTCGCAGCCGTGAGGAATTTGCGTGGCCGAATATTCAGTACCATTTCCTGCCAGTAGCGATTAACTATAACGGCTCGAATGCAGTGAAAGAGCACGGTTTCCAGTGCCACGTCGGCTCAATGCGCTCGCCAAGCCGTGGGCATGTGCGGATTAAATCCCGCGACCCGCACCAGCATCCGGCGATTCTGTTTAACTACATGTCGCACGAGCAGGACTGGCAGGAGTTCCGCGACGCAATTCGCATCACCCGCGAGATCATGCATCAACCCGCGCTGGATCAGTATCGTGGCCGCGAAATCAGCCCCGGTGTCGAATGCCAGACGGATGAACAGCTCGATGAGTTCGTGCGTAACCACGCCGAAACCGCCTTCCATCCGTGCGGTACCTGCAAAATGGGTTACGACGAGATGTCCGTGGTTGACGGCGAAGGCCGCGTACACGGGTTAGAAGGCCTGCGTGTGGTGGATGCGTCGATTATGCCGCAGATTATCACCGGGAATTTGAACGCCACGACAATTATGATTGGCGAGAAAATAGCGGATATGATTCGTGGACAGGAAGCGCTGCCGAGGAGCACGGCGGGATATTTTGTGGCAAATGGGATGCCGGTGAGAGCGAAAAAATGA", - "dna_sequence_length": 1671, - "functions": [ - "choline dehydrogenase, a flavoprotein" - ], - "id": "CDS_310", - "location": [ - [ - "NC_000913", - 327247, - "-", - 1671 - ] - ], - "md5": "843503e21e428ba1b761b6da2aeaed65", - "parent_gene": "", - "protein_md5": "fb2f59b05969a7019fd6a5a1a6247a2d", - "protein_translation": "MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKAETRDMGENDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDGKRAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGVECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGQEALPRSTAGYFVANGMPVRAKK", - "protein_translation_length": 556, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0310" - ], - [ - "gene_synonym", - "JW0304" - ], - [ - "gene_synonym", - "ASAP:ABE-0001072" - ], - [ - "gene_synonym", - "b0312" - ], - [ - "gene_synonym", - "betB" - ], - [ - "gene_synonym", - "GI:16128297" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17445" - ], - [ - "gene_synonym", - "NP_414846.1" - ], - [ - "gene_synonym", - "GeneID:947376" - ], - [ - "gene_synonym", - "EcoGene:EG10110" - ] - ], - "dna_sequence": "ATGTCCCGAATGGCAGAACAGCAGCTTTATATACATGGTGGTTATACCTCCGCCACCAGCGGTCGCACCTTCGAGACCATTAACCCGGCCAACGGTAACGTGCTGGCGACCGTGCAGGCCGCCGGGCGCGAGGATGTCGATCGCGCCGTGAAAAGCGCCCAGCAGGGGCAAAAAATCTGGGCGTCGATGACCGCCATGGAGCGCTCGCGTATTCTGCGTCGGGCCGTTGATATTCTGCGTGAACGCAATGACGAACTCGCAAAACTGGAAACCCTCGACACCGGAAAAGCATATTCGGAAACCTCAACCGTCGATATCGTTACCGGTGCGGACGTGCTGGAGTACTACGCCGGGCTGATCCCGGCGCTGGAAGGCAGCCAGATCCCGTTGCGTGAAACGTCCTTTGTGTATACCCGCCGCGAACCGCTGGGCGTAGTGGCAGGGATTGGCGCATGGAACTACCCGATCCAGATTGCCCTGTGGAAATCCGCCCCGGCGCTGGCGGCAGGCAACGCAATGATTTTCAAACCGAGCGAAGTTACCCCGCTTACCGCGTTAAAGCTGGCTGAAATTTACAGCGAAGCGGGCCTGCCGGACGGCGTATTTAACGTGTTGCCGGGCGTGGGCGCGGAGACCGGGCAATATCTGACCGAGCATCCGGGCATTGCCAAAGTGTCATTTACCGGCGGTGTCGCCAGCGGCAAAAAAGTGATGGCTAACTCGGCGGCCTCTTCCCTGAAAGAAGTGACCATGGAACTGGGCGGTAAATCACCGCTGATCGTTTTCGATGATGCGGATCTCGATCTCGCCGCCGATATCGCCATGATGGCAAACTTCTTCAGCTCCGGTCAGGTGTGTACCAATGGCACCCGCGTCTTCGTTCCGGCGAAATGCAAAGCCGCATTTGAGCAGAAAATTCTGGCGCGCGTTGAGCGCATTCGCGCGGGCGACGTTTTCGATCCGCAAACTAACTTCGGCCCGCTGGTCAGCTTCCCGCATCGCGATAACGTGCTGCGCTATATCGCCAAAGGCAAAGAGGAAGGCGCGCGCGTACTGTGCGGCGGCGATGTACTGAAAGGCGATGGCTTCGATAACGGCGCATGGGTTGCACCGACAGTGTTCACCGATTGCAGCGACGATATGACCATCGTGCGTGAAGAGATCTTCGGGCCAGTGATGTCCATTCTGACCTACGAGTCGGAAGACGAAGTCATTCGCCGCGCTAACGATACCGACTACGGCCTGGCGGCGGGCATCGTGACAGCGGACCTGAACCGCGCGCATCGCGTCATTCATCAGCTGGAAGCGGGTATTTGCTGGATCAACACCTGGGGCGAATCCCCGGCAGAGATGCCCGTTGGCGGCTACAAACACTCCGGCATTGGTCGCGAGAACGGCGTGATGACGCTCCAGAGTTACACCCAGGTGAAGTCCATCCAGGTTGAGATGGCTAAATTCCAGTCCATATTCTAA", - "dna_sequence_length": 1473, - "functions": [ - "betaine aldehyde dehydrogenase, NAD-dependent" - ], - "id": "CDS_311", - "location": [ - [ - "NC_000913", - 328733, - "-", - 1473 - ] - ], - "md5": "32f337c1f9e16c15bb28b44f3937ea1f", - "parent_gene": "", - "protein_md5": "49fcbbfa7b0d959af14afbe967b8c19b", - "protein_translation": "MSRMAEQQLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKGDGFDNGAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQVEMAKFQSIF", - "protein_translation_length": 490, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001076" - ], - [ - "gene_synonym", - "ECK0311" - ], - [ - "gene_synonym", - "NP_414847.3" - ], - [ - "gene_synonym", - "JW0305" - ], - [ - "gene_synonym", - "b0313" - ], - [ - "gene_synonym", - "GeneID:944981" - ], - [ - "gene_synonym", - "betI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17446" - ], - [ - "gene_synonym", - "GI:49176011" - ], - [ - "gene_synonym", - "EcoGene:EG10111" - ] - ], - "dna_sequence": "ATGCCCAAATTGGGGATGCAGTCGATCCGGCGCAGACAACTGATCGACGCCACACTGGAAGCAATAAATGAAGTGGGCATGCACGATGCAACGATCGCGCAGATCGCCCGCCGTGCAGGCGTTTCTACGGGGATCATCAGCCACTATTTCAGGGACAAAAATGGTCTGCTGGAAGCAACCATGCGCGATATCACCAGTCAGCTGCGTGACGCGGTTTTGAATCGATTACATGCACTTCCGCAGGGCAGTGCAGAGCAGCGATTACAGGCGATTGTTGGCGGAAACTTCGATGAAACGCAGGTGAGCAGTGCGGCGATGAAAGCCTGGCTGGCGTTCTGGGCCAGCAGTATGCATCAGCCGATGCTCTATCGTTTACAGCAGGTCAGCAGCCGCCGCTTGCTGTCGAATCTGGTGAGCGAGTTTCGTCGCGAATTGCCGCGCGAACAGGCACAGGAAGCGGGCTACGGCCTGGCCGCGCTGATTGATGGATTATGGCTGCGCGCGGCTCTGAGCGGCAAACCGCTGGATAAAACCCGCGCTAATTCCCTGACCCGCCACTTTATCACTCAGCATCTACCCACCGATTAA", - "dna_sequence_length": 588, - "functions": [ - "choline-inducible betIBA-betT divergent operon transcriptional repressor" - ], - "id": "CDS_312", - "location": [ - [ - "NC_000913", - 329334, - "-", - 588 - ] - ], - "md5": "a7da5078e70fbb0ccfc639f62918b884", - "parent_gene": "", - "protein_md5": "2115970d6fc6e17c960a5dd6f7042705", - "protein_translation": "MPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFRDKNGLLEATMRDITSQLRDAVLNRLHALPQGSAEQRLQAIVGGNFDETQVSSAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVSEFRRELPREQAQEAGYGLAALIDGLWLRAALSGKPLDKTRANSLTRHFITQHLPTD", - "protein_translation_length": 195, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0312" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABC9" - ], - [ - "gene_synonym", - "betT" - ], - [ - "gene_synonym", - "ASAP:ABE-0001080" - ], - [ - "gene_synonym", - "NP_414848.1" - ], - [ - "gene_synonym", - "JW0306" - ], - [ - "gene_synonym", - "GeneID:945079" - ], - [ - "gene_synonym", - "b0314" - ], - [ - "gene_synonym", - "EcoGene:EG10112" - ], - [ - "gene_synonym", - "GI:16128299" - ] - ], - "dna_sequence": "ATGACAGACCTTTCACACAGCAGGGAAAAGGACAAAATCAATCCGGTGGTGTTTTACACCTCCGCCGGACTGATTTTGTTGTTTTCCCTGACAACGATCCTGTTTCGCGACTTCTCGGCCCTGTGGATTGGCCGCACGCTGGACTGGGTTTCTAAAACCTTCGGTTGGTACTATCTGCTGGCGGCAACGCTCTATATTGTCTTTGTGGTCTGTATCGCTTGTTCGCGTTTTGGTTCGGTGAAGCTCGGGCCAGAACAATCCAAACCGGAATTCAGCCTGCTGAGTTGGGCGGCGATGCTGTTTGCTGCCGGGATCGGTATCGACCTGATGTTCTTCTCCGTAGCCGAACCGGTAACGCAGTATATGCAGCCGCCGGAAGGCGCGGGACAGACGATTGAGGCCGCGCGTCAGGCGATGGTCTGGACGCTGTTTCACTACGGCTTAACCGGCTGGTCGATGTATGCGCTGATGGGCATGGCGCTCGGATACTTTAGCTATCGTTATAATTTGCCGCTCACCATCCGCTCGGCGCTGTACCCGATCTTCGGTAAACGGATTAACGGGCCGATAGGTCACTCAGTGGATATTGCAGCGGTGATCGGCACTATCTTCGGTATTGCCACTACGCTCGGTATCGGTGTGGTGCAGCTTAACTATGGCTTGAGCGTACTGTTTGATATTCCCGATTCGATGGCGGCGAAAGCGGCACTGATCGCCTTGTCGGTGATAATCGCCACGATCTCTGTCACCTCCGGTGTCGATAAGGGCATTCGCGTGTTATCGGAGCTTAATGTCGCGCTGGCGCTGGGATTGATCCTGTTCGTATTGTTTATGGGCGACACTTCGTTCCTGCTTAATGCACTGGTGCTGAATGTTGGCGACTATGTGAATCGCTTTATGGGCATGACGCTCAACAGTTTTGCCTTCGACCGTCCGGTTGAGTGGATGAATAACTGGACGCTCTTCTTCTGGGCATGGTGGGTGGCATGGTCGCCGTTTGTCGGCTTGTTCCTGGCGCGTATCTCGCGTGGGCGTACCATTCGCCAGTTCGTGCTGGGCACGTTGATTATTCCGTTTACCTTCACGCTGTTATGGCTCTCGGTGTTCGGCAATAGCGCGCTGTATGAAATCATCCACGGCGGCGCGGCATTTGCCGAGGAAGCGATGGTCCATCCGGAGCGCGGCTTCTACAGCCTGCTGGCGCAGTATCCGGCGTTTACCTTTAGCGCCTCCGTCGCCACCATTACTGGCCTGCTGTTTTATGTGACCTCGGCGGACTCCGGGGCGCTGGTGCTGGGGAATTTCACCTCGCAGCTTAAAGATATCAACAGCGACGCCCCCGGCTGGCTGCGCGTCTTCTGGTCGGTGGCGATTGGCCTGCTGACGCTCGGCATGCTGATGACTAACGGGATATCCGCGCTGCAAAACACCACGGTGATTATGGGGCTGCCGTTCAGCTTTGTGATCTTCTTCGTGATGGCGGGGTTGTATAAATCTCTGAAGGTAGAAGATTACCGCCGTGAAAGTGCCAACCGCGATACCGCACCGCGACCGCTGGGGCTTCAGGATCGCCTGAGCTGGAAAAAACGTCTCTCGCGCCTGATGAATTATCCGGGCACGCGTTACACTAAACAGATGATGGAGACGGTCTGTTACCCGGCAATGGAAGAAGTGGCGCAGGAGTTGCGGTTGCGCGGCGCGTACGTGGAGCTAAAAAGCCTGCCACCGGAAGAGGGACAGCAGTTGGGTCATCTGGATTTGTTGGTGCATATGGGCGAAGAGCAAAACTTTGTCTATCAGATTTGGCCGCAGCAATATTCGGTGCCGGGCTTTACCTACCGCGCACGCAGCGGTAAATCGACCTACTACCGGCTGGAAACCTTCCTGTTAGAAGGCAGCCAGGGCAACGACCTGATGGACTACAGCAAAGAGCAGGTGATCACCGATATTCTTGACCAGTACGAGCGGCACCTTAACTTTATTCATCTCCATCGTGAAGCGCCGGGCCATAGCGTGATGTTCCCGGACGCGTGA", - "dna_sequence_length": 2034, - "functions": [ - "choline transporter of high affinity" - ], - "id": "CDS_313", - "location": [ - [ - "NC_000913", - 329463, - "+", - 2034 - ] - ], - "md5": "961a85da88e3c3189ff005d4c394164c", - "parent_gene": "", - "protein_md5": "68a7b6ffd74481e53076568ba8c61d1f", - "protein_translation": "MTDLSHSREKDKINPVVFYTSAGLILLFSLTTILFRDFSALWIGRTLDWVSKTFGWYYLLAATLYIVFVVCIACSRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQYMQPPEGAGQTIEAARQAMVWTLFHYGLTGWSMYALMGMALGYFSYRYNLPLTIRSALYPIFGKRINGPIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIALSVIIATISVTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRFMGMTLNSFAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVLGTLIIPFTFTLLWLSVFGNSALYEIIHGGAAFAEEAMVHPERGFYSLLAQYPAFTFSASVATITGLLFYVTSADSGALVLGNFTSQLKDINSDAPGWLRVFWSVAIGLLTLGMLMTNGISALQNTTVIMGLPFSFVIFFVMAGLYKSLKVEDYRRESANRDTAPRPLGLQDRLSWKKRLSRLMNYPGTRYTKQMMETVCYPAMEEVAQELRLRGAYVELKSLPPEEGQQLGHLDLLVHMGEEQNFVYQIWPQQYSVPGFTYRARSGKSTYYRLETFLLEGSQGNDLMDYSKEQVITDILDQYERHLNFIHLHREAPGHSVMFPDA", - "protein_translation_length": 677, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001086" - ], - [ - "gene_synonym", - "EcoGene:EG11236" - ], - [ - "gene_synonym", - "ECK0313" - ], - [ - "gene_synonym", - "b0315" - ], - [ - "gene_synonym", - "yahA" - ], - [ - "gene_synonym", - "NP_414849.1" - ], - [ - "gene_synonym", - "GeneID:947459" - ], - [ - "gene_synonym", - "JW0307" - ], - [ - "gene_synonym", - "GI:16128300" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21514" - ] - ], - "dna_sequence": "ATGAATTCATGTGATTTTCGTGTTTTTCTGCAAGAGTTCGGTACAACGGTTCATTTGTCATTGCCTGGTAGCGTATCCGAGAAAGAACGACTGCTACTCAAGCTGCTGATGCAGGGAATGTCTGTAACAGAAATATCACAGTACAGAAATCGCAGTGCAAAGACAATTTCACATCAAAAGAAACAGCTCTTTGAGAAACTGGGGATTCAGAGCGATATTACTTTCTGGCGCGATATTTTCTTTCAGTACAATCCGGAGATCATATCCGCCACGGGGAGTAATAGTCACAGATATATTAATGATAATCACTATCACCATATCGTCACGCCTGAAGCCATCAGTCTGGCGTTGGAAAACCACGAATTCAAACCGTGGATCCAACCGGTTTTCTGCGCGCAGACTGGCGTACTGACGGGCTGTGAGGTGCTTGTCCGCTGGGAACATCCACAAACGGGAATTATCCCACCGGATCAGTTTATTCCTCTGGCGGAGTCATCCGGTCTTATTGTCATAATGACCCGCCAACTGATGAAACAGACTGCGGATATTCTGATGCCGGTAAAACATTTGCTGCCGGACAATTTCCATATTGGCATCAACGTCTCGGCGGGTTGTTTTTTGGCAGCGGGATTTGAAAAAGAGTGTCTGAACCTGGTTAATAAATTAGGTAACGATAAAATCAAGCTGGTTCTCGAGCTAACGGAACGTAACCCTATTCCGGTAACGCCAGAAGCCAGAGCGATATTTGACAGCCTTCATCAGCACAACATTACCTTTGCGCTGGATGACTTTGGTACGGGTTATGCGACCTATCGTTACTTGCAGGCGTTCCCGGTCGATTTTATTAAGATCGATAAGTCATTTGTGCAAATGGCGAGTGTCGACGAAATCTCCGGTCATATTGTGGACAATATTGTCGAACTAGCGCGTAAGCCTGGTCTGAGTATCGTGGCGGAAGGGGTAGAAACCCAGGAGCAGGCGGATTTAATGATCGGTAAAGGCGTTCACTTTTTGCAGGGCTATTTGTACTCTCCGCCAGTACCGGGTAATAAATTTATCTCTGAATGGGTAATGAAAGCAGGTGGTTGA", - "dna_sequence_length": 1089, - "functions": [ - "c-di-GMP-specific phosphodiesterase" - ], - "id": "CDS_314", - "location": [ - [ - "NC_000913", - 332371, - "+", - 1089 - ] - ], - "md5": "d1a9c734159ecdaaa9816f090eaa804f", - "parent_gene": "", - "protein_md5": "411b4fa05115770d246cb0fb02e54bd0", - "protein_translation": "MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRDIFFQYNPEIISATGSNSHRYINDNHYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKAGG", - "protein_translation_length": 362, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414850.1" - ], - [ - "gene_synonym", - "ECK0314" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77700" - ], - [ - "gene_synonym", - "JW0308" - ], - [ - "gene_synonym", - "ASAP:ABE-0001088" - ], - [ - "gene_synonym", - "b0316" - ], - [ - "gene_synonym", - "GI:16128301" - ], - [ - "gene_synonym", - "GeneID:945278" - ], - [ - "gene_synonym", - "yahB" - ], - [ - "gene_synonym", - "EcoGene:EG13586" - ] - ], - "dna_sequence": "ATGAACTCAATTTTTACCGAAGAGAATCTGTTGGCATTTACTACCGCTGCGCGTTTTGGCAGCTTCAGTAAAGCCGCAGAAGAGTTGGGTTTAACCACTTCCGCCATTAGCTACACCATTAAGCGTATGGAGACGGGGCTGGATGTGGTGCTGTTCACTCGCAGTACCCGCAGCATTGAGTTAACGGAGTCCGGGCGTTATTTTTTCCGCAAAGCTACCGACCTGCTGAATGATTTTTATGCCATCAAACGCAGAATCGATACTATTTCGCAGGGCATAGAAGCGCGTGTGCGCATTTGTATTAATCAGCTGCTTTATACGCCCAAACACACCGCACGCTTGTTACAGGTGCTGAAAAAGCAGTTTCCTACCTGCCAGATTACCGTCACCACCGAAGTGTATAACGGCGTCTGGGATGCGATTATTAATAATCAGGCCAATATCGCCATCGGCGCACCCGATACACTACTGGACGGCGGCGGTATTGATTACACTGAAATTGGCGCGATTCGCTGGGCTTTTGCTATCGCCCCGGATCACCCGTTAGCCTTTGTGCCGGAACCCATCGCCGAAAGCCAACTGCGTCTCTACCCTAATATTATGGTGGAGGACACCGCGCATACGATTAATAAAAAAGTGGGCTGGTTGCTGCACGGGCAGGAGTCAATTCTGGTGCCAGATTTCAACACCAAATGTCAGTGCCAGATTTTAGGTGAAGGAATTGGTTTTTTGCCGGATTACATGGTCCGTGAGGCGATGACGCAATCCCTGCTGGTTACCCGACAAATCCATAATCCGCGCCAGGATTCGCGCATGTTACTGGCGACTCAGCATTCTGCTACGGGTCAGGTGACGCAGTGGATTAAAAAACAATTTGCGCCAAATGGCATATTAACGGGGATCTATCAGGATTTACTGCATCGGGAGAATTAA", - "dna_sequence_length": 933, - "functions": [ - "putative DNA-bindng transcriptional regulator" - ], - "id": "CDS_315", - "location": [ - [ - "NC_000913", - 334433, - "-", - 933 - ] - ], - "md5": "75c33bf75d1471ecd15936b535931964", - "parent_gene": "", - "protein_md5": "bf3a36c82504415bbb000c2636d22a7e", - "protein_translation": "MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQDLLHREN", - "protein_translation_length": 310, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77219" - ], - [ - "gene_synonym", - "yahC" - ], - [ - "gene_synonym", - "NP_414851.1" - ], - [ - "gene_synonym", - "GeneID:947337" - ], - [ - "gene_synonym", - "ASAP:ABE-0001091" - ], - [ - "gene_synonym", - "JW0309" - ], - [ - "gene_synonym", - "GI:16128302" - ], - [ - "gene_synonym", - "b0317" - ], - [ - "gene_synonym", - "EcoGene:EG13587" - ], - [ - "gene_synonym", - "ECK0315" - ] - ], - "dna_sequence": "ATGAACGGACTCACGGCAACGGGTGTCACCGTCGGTATTTGTGCAGGGCTTTGGCAGTTAGTGTCTTCACATGTCGGGCTCTCTCAAGGATGGGAATTATTAGGAACCATTGGCTTCGTCGCCTTTTGCAGTTTTTATGCCGCAGGCGGCGGTAAATCGGGGTTTATCAGAAGTCTGGCGGTTAATTATTCCGGGATGGTGTGGGCGTTTTTCGCCGCGCTGACTGCTGGTTGGCTGGCCTCTGTAAGTGGACTGTCCGCGTTCTGGGCGAGCGTAATTACTACCGTACCCTTCTCGGCGGTAGTGGTCTGGCAAGGGCGTTTCTGGTTACTGTCCTTTATTCCCGGTGGCTTTCTCGGCATGACGCTGTTTTTTGCCAGCGGGATGAACTGGACGGTGACGTTACTGGGTTTTCTGGCGGGTAACTGCGTGGGGGTAATTTCAGAATATGGTGGACAAAAATTAAGCGAAGCGACGACTAAACGCGACGGGTATTAA", - "dna_sequence_length": 498, - "functions": [ - "putative inner membrane protein" - ], - "id": "CDS_316", - "location": [ - [ - "NC_000913", - 335022, - "-", - 498 - ] - ], - "md5": "89f6469dc519e91a5050a281c000a745", - "parent_gene": "", - "protein_md5": "0235befc034c930aa28b7f4ceca7b4c8", - "protein_translation": "MNGLTATGVTVGICAGLWQLVSSHVGLSQGWELLGTIGFVAFCSFYAAGGGKSGFIRSLAVNYSGMVWAFFAALTAGWLASVSGLSAFWASVITTVPFSAVVVWQGRFWLLSFIPGGFLGMTLFFASGMNWTVTLLGFLAGNCVGVISEYGGQKLSEATTKRDGY", - "protein_translation_length": 165, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001095" - ], - [ - "gene_synonym", - "yahD" - ], - [ - "gene_synonym", - "JW0310" - ], - [ - "gene_synonym", - "GeneID:947681" - ], - [ - "gene_synonym", - "ECK0316" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77736" - ], - [ - "gene_synonym", - "EcoGene:EG13588" - ], - [ - "gene_synonym", - "NP_414852.1" - ], - [ - "gene_synonym", - "GI:16128303" - ], - [ - "gene_synonym", - "b0318" - ] - ], - "dna_sequence": "ATGAGTATAAAAAATCTACCTGCCGACTATTTATTGGCTGCACAACAGGGTGATATCGATAAAGTAAAAACCTGCCTTGCGCTGGGTGTCGATATTAATACCTGCGATCGTCAGGGGAAAACGGCAATTACGCTGGCAAGTTTATATCAGCAATATGCTTGCGTTCAGGCATTAATTGATGCCGGAGCGGATATTAATAAGCAAGATCATACCTGTTTAAATCCTTTTTTAATTAGCTGTCTGAACGATGATTTAACGCTACTACGAATTATTTTACCGGCTAAACCCGATCTTAATTGCGTAACCCGTTTTGGCGGTGTCGGCCTGACGCCTGCCTGTGAAAAAGGCCATTTAAGTATTGTAAAAGAGCTTTTGGCGCATACGGAGATTAACGTTAACCAGACCAACCATGTAGGCTGGACGCCGCTACTGGAAGCGATTGTGCTTAATGATGGTGGTATTAAACAGCAGGCGATTGTGCAGTTATTGCTGGAACACGGTGCCAGCCCGCATCTGACCGATAAATATGGCAAAACGCCACTGGAACTGGCGCGGGAACGGGGCTTTGAAGAGATTGCGCAGTTACTGATTGCCGCAGGTGCATAA", - "dna_sequence_length": 606, - "functions": [ - "ankyrin repeat protein" - ], - "id": "CDS_317", - "location": [ - [ - "NC_000913", - 335280, - "+", - 606 - ] - ], - "md5": "062b49b8249024fd362dfbab490ce332", - "parent_gene": "", - "protein_md5": "69b4759cf5429d6ae98c42bf3b4dafa3", - "protein_translation": "MSIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALIDAGADINKQDHTCLNPFLISCLNDDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA", - "protein_translation_length": 201, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0311" - ], - [ - "gene_synonym", - "yahE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77297" - ], - [ - "gene_synonym", - "ECK0317" - ], - [ - "gene_synonym", - "GeneID:947134" - ], - [ - "gene_synonym", - "EcoGene:EG13589" - ], - [ - "gene_synonym", - "GI:16128304" - ], - [ - "gene_synonym", - "ASAP:ABE-0001097" - ], - [ - "gene_synonym", - "NP_414853.1" - ], - [ - "gene_synonym", - "b0319" - ] - ], - "dna_sequence": "GTGTGGGCGCTAACTGCGGATGCGGATTTTCTGGCGCAGCGGGGGCAAGGACAGGTTGAACAGGTCTTTGCCAGAGCGGTAAATATCGCACTCCCGGCTCGCCAGCAGTTGCTGACGCTGCTTTGTGAAGAGTACGACAATGCGCCAAACAGTTGTCGGTTGGCACTCACTCACTTTGATGATCTGTTCCGGCATGGTGATAAGGTTCAGTTTGACGATCAAGGTATTACGGTTGGTCAACATCTTCATATAGAGATGAGTCGTTGTCGGCGTTGGCTGTCCCCAACCTTGCAAATGACCGCTGTGAATTTTCACCTTATCGCCTGGCTACAGTGGCACGACATTATTCATCAGCACCTGGGGGAAAATGAAACCCTGTTTAATTATCGCGGCGATAATCCGTTTTATCAGGCGTTAAATAAAGAATTACATATTAAACGACGGGCAGTTATTCAGGCCGTAAACGATAAACAAAATATCGCCTCAGCGGTCGCCAGTATGATGGGGTTAGGGATTGGCCTTACGCCATCAGCCGACGATTATTTAACAGGTCTGGCGCTTATTTTATTTATTCCCGGGCATCCGGCGGAAAAATACAAAGAGGAATTTTATCTCGGTCTGCAACGCGGCAAAAATAATACCACATTATTAAGTGCCATAACGCTGGAAGCCGCATTACAACAACGCTGCCGGGAAAATATTCATCGTTTTATTCACAACATTATTTATGACATCCCTGGGAACGCAACTCAGGCAATAGAAAAAATTAAACATATTGGCTCCAGTTCCGGCTGCGACATGCTGTATGGCATGGCCGATGGTTGTGCGCTGAGCCAAACCTACGGAGGGAATTATGTCAGTTAA", - "dna_sequence_length": 864, - "functions": [ - "DUF2877 family protein" - ], - "id": "CDS_318", - "location": [ - [ - "NC_000913", - 335925, - "+", - 864 - ] - ], - "md5": "b81f9b5cc9eb30198abcd76c47378375", - "parent_gene": "", - "protein_md5": "6f147c448593702425030acd785b2774", - "protein_translation": "MWALTADADFLAQRGQGQVEQVFARAVNIALPARQQLLTLLCEEYDNAPNSCRLALTHFDDLFRHGDKVQFDDQGITVGQHLHIEMSRCRRWLSPTLQMTAVNFHLIAWLQWHDIIHQHLGENETLFNYRGDNPFYQALNKELHIKRRAVIQAVNDKQNIASAVASMMGLGIGLTPSADDYLTGLALILFIPGHPAEKYKEEFYLGLQRGKNNTTLLSAITLEAALQQRCRENIHRFIHNIIYDIPGNATQAIEKIKHIGSSSGCDMLYGMADGCALSQTYGGNYVS", - "protein_translation_length": 287, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yahF" - ], - [ - "gene_synonym", - "JW0312" - ], - [ - "gene_synonym", - "EcoGene:EG13590" - ], - [ - "gene_synonym", - "NP_414854.1" - ], - [ - "gene_synonym", - "ECK0318" - ], - [ - "gene_synonym", - "ASAP:ABE-0001099" - ], - [ - "gene_synonym", - "GI:16128305" - ], - [ - "gene_synonym", - "GeneID:947298" - ], - [ - "gene_synonym", - "b0320" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77187" - ] - ], - "dna_sequence": "ATGTCAGTTAAAATAGTCATTAAACCGAATACCTATTTTGATTCTGTCTCGCTGATGTCTATCTCCACGCGTGCAAATAAACTCGACGGCGTCGAGCAGGCATTTGTGGCGATGGCGACCGAAATGAATAAAGGCGTGCTGAAGAATTTAGGACTGCTGACGCCGGAGCTGGAGCAGGCGAAAAACGGCGACCTGATGATTGTCATCAATGGTAAATCGGGTGCGGACAACGAGCAGTTACTGGTGGAGATTGAAGAACTGTTCAACACCAAAGCGCAAAGCGGCTCGCACGAGGCGCGTTACGCCACTATTGGCAGCGCCAAAAAGCATATCCCGGAAAGTAACCTGGCGGTGATTTCGGTCAACGGTCTGTTTGCCGCTCGCGAAGCGCGTCAGGCGCTGCAAAACGATCTCAACGTGATGCTGTTTTCCGATAACGTCTCAGTTGAAGATGAACTGGCGCTCAAGCAACTGGCCCACGAAAAAGGGCTGCTGATGATGGGGCCAGACTGTGGCACGGCGATTATCAACGGCGCGGCGCTCTGTTTTGGTAACGCCGTGCGTCGCGGCAACATCGGTATTGTTGGCGCATCCGGCACCGGCAGTCAGGAGTTGAGCGTCCGCATTCATGAATTTGGCGGCGGCGTTTCGCAACTGATTGGCACCGGCGGGCGCGACCTGAGCGAGAAAATCGGCGGCCTGATGATGCTCGACGCCATCGGGATGCTGGAAAACGATCCGCAAACTGAAATCATTGCGCTTATCTCCAAACCGCCTGCGCCTGCGGTGGCCCGCAAAGTGCTGGAACGTGCGCGCGCCTGCCGCAAGCCGGTGGTCGTCTGCTTCCTCGATCGTGGCGAAACGCCAGTGGATGAGCAGGGGCTACAGTTTGCCCGCGGCACCAAAGAGGCAGCGCTAAAAGCGGTGATGCTCTCCGGCGTGAAACAGGAAAATCTCGACCTGCATACGCTTAACCAGCCGTTGATTGCGGATGTGCGTGCGCGTCTGCAACCGCAGCAGAAATACATTCGTGGCCTGTTCTGCGGCGGCACGCTGTGCGACGAAACCATGTTCGCGGTGATGGAAAAACATGGCGATGTCTACAGCAACATTCAGCCCGATCCGGAATTCCGCCTGAAAGATATCAACCGCAGCATCAAACACACCTTCCTCGACTTTGGCGATGACGACTTCACCAATGGCAAGCCGCACCCGATGATTGACCCCACCAACCGCATCAGTCGCTTGATCGAAGAGGCGCGCGATCCAGAAGTGGCGGTGATCGTGATGGATTTTGTGCTCGGATTTGGATCGCATGAAGATCCGGTCGGCTCCACCATCGAGACGATCAAAGAAGCGAAAGCGATCGCCGCTGCCGAAGGACGCGAGTTGATCATTCTCGCCTATGTGCTGGGTACCGATCTTGATACGCCATCGTTAGAACAACAAAGCCAGATGCTGCTTGATGCCGGAGTGATTCTGGCGAGCAGCAGCACCAATACCGGATTGCTGGCGCGTGAATTTATCTGCAAAGGGGAGGAAGCCTGA", - "dna_sequence_length": 1548, - "functions": [ - "putative NAD(P)-binding succinyl-CoA synthase" - ], - "id": "CDS_319", - "location": [ - [ - "NC_000913", - 336778, - "+", - 1548 - ] - ], - "md5": "16bd6b6367d1380307c1ae7af3301db1", - "parent_gene": "", - "protein_md5": "9ad8ffbceb86405433e36b45e4dd9c55", - "protein_translation": "MSVKIVIKPNTYFDSVSLMSISTRANKLDGVEQAFVAMATEMNKGVLKNLGLLTPELEQAKNGDLMIVINGKSGADNEQLLVEIEELFNTKAQSGSHEARYATIGSAKKHIPESNLAVISVNGLFAAREARQALQNDLNVMLFSDNVSVEDELALKQLAHEKGLLMMGPDCGTAIINGAALCFGNAVRRGNIGIVGASGTGSQELSVRIHEFGGGVSQLIGTGGRDLSEKIGGLMMLDAIGMLENDPQTEIIALISKPPAPAVARKVLERARACRKPVVVCFLDRGETPVDEQGLQFARGTKEAALKAVMLSGVKQENLDLHTLNQPLIADVRARLQPQQKYIRGLFCGGTLCDETMFAVMEKHGDVYSNIQPDPEFRLKDINRSIKHTFLDFGDDDFTNGKPHPMIDPTNRISRLIEEARDPEVAVIVMDFVLGFGSHEDPVGSTIETIKEAKAIAAAEGRELIILAYVLGTDLDTPSLEQQSQMLLDAGVILASSSTNTGLLAREFICKGEEA", - "protein_translation_length": 515, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0313" - ], - [ - "gene_synonym", - "yahG" - ], - [ - "gene_synonym", - "ASAP:ABE-0001101" - ], - [ - "gene_synonym", - "ECK0319" - ], - [ - "gene_synonym", - "GeneID:945379" - ], - [ - "gene_synonym", - "GI:16128306" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77221" - ], - [ - "gene_synonym", - "b0321" - ], - [ - "gene_synonym", - "NP_414855.1" - ], - [ - "gene_synonym", - "EcoGene:EG13591" - ] - ], - "dna_sequence": "ATGAGCCAGTCACTGTTTAGCCAACCATTGAACGTTATTAACGTCGGCATCGCCATGTTTAGCGATGACCTGAAAAAGCAGCATGTAGAAGTGACTCAACTCGACTGGACGCCGCCGGGGCAGGGCAATATGCAGGTGGTGCAGGCGCTGGATAACATTGCCGATTCGCCGCTGGCGGACAAAATCGCCGCCGCTAACCAGCAGGCGCTGGAGCGTATTATCCAGTCGCATCCGGTGCTGATTGGTTTTGATCAGGCGATTAACGTGGTGCCGGGCATGACGGCGAAAACCATTCTTCACGCCGGGCCGCCGATCACCTGGGAAAAAATGTGCGGCGCGATGAAAGGCGCGGTCACCGGAGCGCTGGTGTTCGAAGGACTGGCGAAAGATCTCGACGAGGCGGCTGAACTGGCGGCTTCCGGGGAGATCACCTTCTCGCCGTGTCACGAGCACGACTGCGTGGGATCGATGGCGGGTGTTACCTCGGCCTCGATGTTTATGCACATCGTAAAAAACAAAACCTACGGCAACATCGCTTATACCAACATGAGCGAGCAGATGGCGAAGATTTTGCGTATGGGCGCTAACGACCAGAGCGTGATTGACCGCCTGAACTGGATGCGTGATGTGCAGGGACCAATACTGCGCGACGCGATGAAAATTATCGGCGAAATCGATCTGCGCTTAATGCTGGCGCAGGCGCTGCATATGGGCGATGAGTGCCATAACCGCAATAACGCCGGGACGACACTGCTGATTCAGGCGCTGACGCCGGGGATTATTCAGGCGGGTTATTCCGTCGAGCAACAGCGCGAAGTGTTTGAGTTTGTCGCCAGCAGCGACTACTTCTCCGGCCCGACGTGGATGGCGATGTGTAAAGCGGCGATGGATGCGGCGCATGGCATCGAATACAGCACCGTGGTCACCACCATGGCGCGTAACGGCGTCGAGTTCGGCCTGCGGGTCAGCGGCCTGCCGGGGCAATGGTTTACCGGCCCGGCGCAGCAGGTGATCGGCCCGATGTTTGCCGGTTATAAGCCGGAAGATTCGGGGCTGGATATCGGCGACAGCGCCATCACCGAAACCTACGGTATTGGCGGATTTGCTATGGCGACCGCGCCCGCTATCGTCGCGCTGGTGGGCGGCACGGTGGAAGAAGCTATTGATTTCTCCCGTCAGATGCGCGAAATCACCCTCGGTGAAAACCCCAACGTCACCATTCCGCTGCTCGGTTTTATGGGCGTGCCGTCGGCAATCGACATCACCCGCGTGGGTAGCAGCGGCATTCTGCCGGTGATCAACACCGCCATCGCCCATAAAGATGCGGGCGTCGGCATGATTGGCGCGGGCATTGTGCATCCACCTTTTGCCTGCTTCGAGAAAGCCATTCTTGGCTGGTGCGAACGTTACGGCGTCTGA", - "dna_sequence_length": 1419, - "functions": [ - "DUF1116 family protein" - ], - "id": "CDS_320", - "location": [ - [ - "NC_000913", - 338325, - "+", - 1419 - ] - ], - "md5": "7ea2173310e2417ae3031e8b47c2d0a7", - "parent_gene": "", - "protein_md5": "e70ae54fffaa6d941a02bbbf8257d731", - "protein_translation": "MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNMQVVQALDNIADSPLADKIAAANQQALERIIQSHPVLIGFDQAINVVPGMTAKTILHAGPPITWEKMCGAMKGAVTGALVFEGLAKDLDEAAELAASGEITFSPCHEHDCVGSMAGVTSASMFMHIVKNKTYGNIAYTNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPILRDAMKIIGEIDLRLMLAQALHMGDECHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEFVASSDYFSGPTWMAMCKAAMDAAHGIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPAQQVIGPMFAGYKPEDSGLDIGDSAITETYGIGGFAMATAPAIVALVGGTVEEAIDFSRQMREITLGENPNVTIPLLGFMGVPSAIDITRVGSSGILPVINTAIAHKDAGVGMIGAGIVHPPFACFEKAILGWCERYGV", - "protein_translation_length": 472, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001107" - ], - [ - "gene_synonym", - "GeneID:944984" - ], - [ - "gene_synonym", - "JW0315" - ], - [ - "gene_synonym", - "NP_414857.1" - ], - [ - "gene_synonym", - "ECK0321" - ], - [ - "gene_synonym", - "yahI" - ], - [ - "gene_synonym", - "b0323" - ], - [ - "gene_synonym", - "EcoGene:EG13593" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77624" - ], - [ - "gene_synonym", - "GI:16128308" - ] - ], - "dna_sequence": "ATGAAAGAGCTTGTGGTCGTTGCCATTGGTGGCAACAGCATTATCAAAGATAACGCCAGCCAGTCGATTGAGCATCAGGCGGAGGCGGTGAAAGCCGTCGCCGATACGGTGCTGGAAATGCTGGCTTCCGATTACGACATTGTGCTGACCCACGGCAACGGGCCGCAGGTCGGGCTGGATTTACGCCGTGCGGAGATTGCCCACAAGCGCGAAGGGCTGCCCTTAACGCCGCTGGCGAACTGTGTGGCAGATACGCAGGGCGGCATCGGCTATCTGATCCAACAGGCGCTGAATAACCGGCTGGCGCGTCACGGCGAGAAGAAAGCCGTCACCGTGGTGACTCAGGTGGAAGTGGATAAAAACGATCCAGGTTTTGCCCATCCCACCAAGCCCATCGGCGCATTCTTTAGTGACAGCCAGCGTGACGAATTACAAAAGGCAAACCCTGACTGGTGTTTTGTTGAAGATGCCGGGCGGGGCTATCGCCGCGTGGTCGCCTCGCCGGAACCGAAACGTATTGTCGAAGCACCTGCCATTAAAGCGCTGATCCAACAAGGTTTTGTCGTAATTGGCGCGGGCGGCGGTGGAATTCCGGTAGTGCGTACTGACGCGGGAGATTACCAAAGCGTGGACGCGGTTATCGACAAAGATCTCTCTACCGCGCTGCTGGCCCGTGAAATTCACGCCGACATTCTTGTGATCACCACTGGCGTCGAAAAAGTGTGTATTCACTTTGGCAAACCGCAGCAGCAGGCGCTCGATCGGGTGGATATTGCCACCATGACCCGCTATATGCAGGAAGGGCATTTCCCGCCCGGCAGCATGTTGCCAAAAATCATCGCCAGCCTGACATTTTTAGAACAAGGCGGCAAAGAAGTGATTATCACCACGCCGGAATGCCTGCCTGCGGCGCTGCGCGGCGAAACGGGCACTCATATTATTAAAACGTAA", - "dna_sequence_length": 951, - "functions": [ - "carbamate kinase-like protein" - ], - "id": "CDS_321", - "location": [ - [ - "NC_000913", - 340165, - "+", - 951 - ] - ], - "md5": "2ceeda6b2ed66a76a1a27a93e9b4f069", - "parent_gene": "", - "protein_md5": "3ed616c14a8b68224a1adb27ce200cdc", - "protein_translation": "MKELVVVAIGGNSIIKDNASQSIEHQAEAVKAVADTVLEMLASDYDIVLTHGNGPQVGLDLRRAEIAHKREGLPLTPLANCVADTQGGIGYLIQQALNNRLARHGEKKAVTVVTQVEVDKNDPGFAHPTKPIGAFFSDSQRDELQKANPDWCFVEDAGRGYRRVVASPEPKRIVEAPAIKALIQQGFVVIGAGGGGIPVVRTDAGDYQSVDAVIDKDLSTALLAREIHADILVITTGVEKVCIHFGKPQQQALDRVDIATMTRYMQEGHFPPGSMLPKIIASLTFLEQGGKEVIITTPECLPAALRGETGTHIIKT", - "protein_translation_length": 316, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0316" - ], - [ - "gene_synonym", - "ASAP:ABE-0001109" - ], - [ - "gene_synonym", - "GeneID:944976" - ], - [ - "gene_synonym", - "yahJ" - ], - [ - "gene_synonym", - "ECK0322" - ], - [ - "gene_synonym", - "b0324" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77554" - ], - [ - "gene_synonym", - "EcoGene:EG13594" - ], - [ - "gene_synonym", - "NP_414858.1" - ], - [ - "gene_synonym", - "GI:16128309" - ] - ], - "dna_sequence": "ATGAAAGAAAGCAATAGCCGCCGTGAATTTCTGAGCCAGAGCGGTAAGATGGTCACCGCCGCCGCGCTGTTTGGTACCTCTGTGCCGCTCGCCCATGCGGCGGTAGCTGGCACCCTAAACTGCGAAGCGAACAACACCATGAAAATCACTGACCCGCATTACTATCTCGATAACGTGCTGCTGGAAACCGGTTTTGACTACGAAAATGGCGTGGCGGTGCAGACCCGCACGGCGCGCCAGACCGTGGAGATTCAGGACGGCAAAATTGTCGCCCTGCGCGAGAACAAGCTGCATCCGGACGCCACGCTGCCGCACTATGACGCTGGCGGTAAGCTGATGCTGCCCACCACCCGCGACATGCATATTCATCTCGACAAAACCTTTTACGGCGGGCCGTGGCGCTCGCTCAATCGTCCGGCAGGCACCACCATCCAGGACATGATCAAACTCGAGCAGAAAATGCTGCCGGAACTGCAACCGTACACTCAGGAGCGGGCAGAAAAACTGATTGATTTATTGCAGTCGAAAGGCACCACCATTGCCCGCAGCCACTGCAATATCGAACCGGTTTCCGGCCTGAAAAATCTGCAAAATTTGCAGGCGGTGCTGGCGCGACGTCAGGCGGGCTTTGAGTGTGAAATCGTCGCCTTCCCGCAGCACGGTTTGCTGCTGTCGAAATCTGAACCTTTAATGCGTGAAGCGATGCAGGCGGGGGCGCATTACGTCGGCGGCCTGGACCCGACCAGTGTTGATGGCGCGATGGAAAAATCCCTCGACACCATGTTCCAGATTGCGCTGGACTACGACAAAGGCGTCGATATTCACCTGCACGAAACCACTCCGGCAGGCGTGGCAGCCATCAATTATATGGTTGAAACGGTAGAGAAAACGCCACAGCTGAAGGGCAAGCTGACCATCAGTCACGCCTTTGCGCTGGCAACGCTCAACGAGCAACAGGTAGATGAACTGGCGAACCGGATGGTGGTGCAACAAATTTCTATCGCCTCGACGGTGCCGATTGGCACGCTGCATATGCCGCTCAAACAGTTGCACGACAAAGGCGTAAAAGTGATGACTGGCACTGACAGCGTTATCGACCACTGGTCGCCTTATGGTCTGGGCGACATGCTGGAAAAAGCCAATCTGTACGCGCAGCTCTATATTCGTCCTAACGAACAGAACCTCTCCCGCTCGCTGTTTTTAGCCACTGGCGATGTATTGCCGCTGAATGAAAAAGGCGAGCGTGTATGGCCAAAAGCGCAGGATGACGCCAGCTTTGTGCTGGTGGACGCCTCCTGTTCCGCCGAGGCGGTGGCGCGTATCTCGCCGAGAACCGCAACGTTCCATAAAGGGCAACTGGTGTGGGGGAGTGTGGCAGGTTGA", - "dna_sequence_length": 1383, - "functions": [ - "putative metallo-dependent hydrolase domain deaminase" - ], - "id": "CDS_322", - "location": [ - [ - "NC_000913", - 341125, - "+", - 1383 - ] - ], - "md5": "37ebb886a8b045f8ff20b793edd7a79b", - "parent_gene": "", - "protein_md5": "8e6d41c61a016da310468948f231438f", - "protein_translation": "MKESNSRREFLSQSGKMVTAAALFGTSVPLAHAAVAGTLNCEANNTMKITDPHYYLDNVLLETGFDYENGVAVQTRTARQTVEIQDGKIVALRENKLHPDATLPHYDAGGKLMLPTTRDMHIHLDKTFYGGPWRSLNRPAGTTIQDMIKLEQKMLPELQPYTQERAEKLIDLLQSKGTTIARSHCNIEPVSGLKNLQNLQAVLARRQAGFECEIVAFPQHGLLLSKSEPLMREAMQAGAHYVGGLDPTSVDGAMEKSLDTMFQIALDYDKGVDIHLHETTPAGVAAINYMVETVEKTPQLKGKLTISHAFALATLNEQQVDELANRMVVQQISIASTVPIGTLHMPLKQLHDKGVKVMTGTDSVIDHWSPYGLGDMLEKANLYAQLYIRPNEQNLSRSLFLATGDVLPLNEKGERVWPKAQDDASFVLVDASCSAEAVARISPRTATFHKGQLVWGSVAG", - "protein_translation_length": 460, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0317" - ], - [ - "gene_synonym", - "GeneID:944975" - ], - [ - "gene_synonym", - "ASAP:ABE-0001113" - ], - [ - "gene_synonym", - "yahK" - ], - [ - "gene_synonym", - "ECK0323" - ], - [ - "gene_synonym", - "GI:16128310" - ], - [ - "gene_synonym", - "b0325" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75691" - ], - [ - "gene_synonym", - "EcoGene:EG13595" - ], - [ - "gene_synonym", - "NP_414859.1" - ] - ], - "dna_sequence": "ATGAAGATCAAAGCTGTTGGTGCATATTCCGCTAAACAACCACTTGAACCGATGGATATCACCCGGCGTGAACCGGGACCGAATGATGTCAAAATCGAAATCGCTTACTGTGGCGTTTGCCATTCCGATCTCCACCAGGTCCGTTCCGAGTGGGCGGGGACGGTTTACCCCTGCGTGCCGGGTCATGAAATTGTGGGGCGTGTGGTAGCCGTTGGTGATCAGGTAGAAAAATATGCGCCGGGCGATCTGGTCGGTGTCGGCTGCATTGTCGACAGTTGTAAACATTGCGAAGAGTGTGAAGACGGGTTGGAAAACTACTGTGATCACATGACCGGCACCTATAACTCGCCGACGCCGGACGAACCGGGCCATACTCTGGGCGGCTACTCACAACAGATCGTCGTTCATGAGCGATATGTTCTGCGTATTCGTCACCCGCAAGAGCAGCTGGCGGCGGTGGCTCCTTTGTTGTGTGCAGGGATCACCACGTATTCGCCGCTACGTCACTGGCAGGCCGGGCCGGGTAAAAAAGTGGGCGTGGTCGGCATCGGCGGTCTGGGACATATGGGGATTAAGCTGGCCCACGCGATGGGGGCACATGTGGTGGCATTTACCACTTCTGAGGCAAAACGCGAAGCGGCAAAAGCCCTGGGGGCCGATGAAGTTGTTAACTCACGCAATGCCGATGAGATGGCGGCTCATCTGAAGAGTTTCGATTTCATTTTGAATACAGTAGCTGCGCCACATAATCTCGACGATTTTACCACCTTGCTGAAGCGTGATGGCACCATGACGCTGGTTGGTGCGCCTGCGACACCGCATAAATCGCCGGAAGTTTTCAACCTGATCATGAAACGCCGTGCGATAGCCGGTTCTATGATTGGCGGCATTCCAGAAACTCAGGAGATGCTCGATTTTTGCGCCGAACATGGCATCGTGGCTGATATAGAGATGATTCGGGCCGATCAAATTAATGAAGCCTATGAGCGAATGCTGCGCGGTGATGTGAAATATCGTTTTGTTATCGATAATCGCACACTAACAGACTGA", - "dna_sequence_length": 1050, - "functions": [ - "broad specificity NADPH-dependent aldehyde reductase, Zn-containing" - ], - "id": "CDS_323", - "location": [ - [ - "NC_000913", - 342884, - "+", - 1050 - ] - ], - "md5": "9fd35892ba214bd6a73fd6d47834c972", - "parent_gene": "", - "protein_md5": "b5d80ba7a45d546018efaf0d15f43c1c", - "protein_translation": "MKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVIDNRTLTD", - "protein_translation_length": 349, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128311" - ], - [ - "gene_synonym", - "NP_414860.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77393" - ], - [ - "gene_synonym", - "ECK0324" - ], - [ - "gene_synonym", - "yahL" - ], - [ - "gene_synonym", - "JW0318" - ], - [ - "gene_synonym", - "GeneID:944970" - ], - [ - "gene_synonym", - "ASAP:ABE-0001117" - ], - [ - "gene_synonym", - "b0326" - ], - [ - "gene_synonym", - "EcoGene:EG13596" - ] - ], - "dna_sequence": "ATGATATCATTAAAAGCTCCGCACAATAATTTGATGCCATATACGCAACAAAGCATACTTAATACGGTTAAAAACAATCAGTTACCAGAGGATATCAAAAGCTCCCTGGTTTCCTGTGTCGATATATTCAAGGTTTTGATTAAACAATATTATGATTATCCTTATGATTGTCGTGATGATTTAGTCGATGACGACAAACTCATTCATCTCATGGCTGCCGTACGAGACTGTGAGTGGTCAGACGATAACGCACTCACCATAAATGTGCAGTTTAATGATTTCCCTGGATTTTATGACTGGATGGATTACCCTGATCACCCGGTTAAGTTTGTTTTTCACATACTTGAAAATCAAAAAGGGACAGTTTGGGTATATGACCAGGATGATGCGTTTCTTGATATTAAAGCAAACGTGCAGGCTGGACGCTTTACCGGGCTTAAGAAATTAGTGCAGTTTATCGATTCAGTGCGAACAGATTGCAAATGTATTCTTCTTGAATACCATATGCCTTTGCTGAGAATTTTCCCTAAAGGGAAAGAGTGTATGCATGTGGAAAAATGGCTTCGCGAAATGTCGTCTATTCCGGAGACAGACGCGCCCATTAAGCAGGCGCTTGCGCATGGATTATTATTACACTTAAAAAATATCTACCCTGTTTTTCCTGAATCACTGGTGATGTTATTGCTCTCTGTTCTGGACGTAAAAACATACAGAGATGATGCGCGATTAAATGAATGGATATCTAATAGAGTGCAGGAATTAGGTGACAGATATTATCCTGTAAATAAGCACGTTAAAATCCGCTACACTCTTTAG", - "dna_sequence_length": 816, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_324", - "location": [ - [ - "NC_000913", - 344176, - "+", - 816 - ] - ], - "md5": "b8a8678ca0bb30e5c385fb2b1eed7077", - "parent_gene": "", - "protein_md5": "01aa3a9a4485110e530f4034332630cc", - "protein_translation": "MISLKAPHNNLMPYTQQSILNTVKNNQLPEDIKSSLVSCVDIFKVLIKQYYDYPYDCRDDLVDDDKLIHLMAAVRDCEWSDDNALTINVQFNDFPGFYDWMDYPDHPVKFVFHILENQKGTVWVYDQDDAFLDIKANVQAGRFTGLKKLVQFIDSVRTDCKCILLEYHMPLLRIFPKGKECMHVEKWLREMSSIPETDAPIKQALAHGLLLHLKNIYPVFPESLVMLLLSVLDVKTYRDDARLNEWISNRVQELGDRYYPVNKHVKIRYTL", - "protein_translation_length": 271, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001120" - ], - [ - "gene_synonym", - "GI:90111114" - ], - [ - "gene_synonym", - "ECK0325" - ], - [ - "gene_synonym", - "EcoGene:EG13597" - ], - [ - "gene_synonym", - "yahM" - ], - [ - "gene_synonym", - "NP_414861.2" - ], - [ - "gene_synonym", - "b0327" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75692" - ], - [ - "gene_synonym", - "GeneID:944969" - ], - [ - "gene_synonym", - "JW5044" - ] - ], - "dna_sequence": "ATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCCATTGTTTGGCTATTCAGGATGGGGCAGACCAATGAAAAAAGCCCACACAGGGGAGAGTGGGCTGAAATGGGAAGCTAAAGACTCAAGTAAACTTATCGGAAATAAGGACCACGCATTACGGGGGCTATCATCGCCGATGGCCGTGATTCGGCAAATCAGGTTGATTACGTAG", - "dna_sequence_length": 246, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_325", - "location": [ - [ - "NC_000913", - 345404, - "+", - 246 - ] - ], - "md5": "e68509ae2cc64a01b177091e60c00eb2", - "parent_gene": "", - "protein_md5": "b1eb28d966647641742f8ce38cfe4784", - "protein_translation": "MAVQLFKTLLNQIPLLSSLQSGTLPLFGYSGWGRPMKKAHTGESGLKWEAKDSSKLIGNKDHALRGLSSPMAVIRQIRLIT", - "protein_translation_length": 81, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001122" - ], - [ - "gene_synonym", - "yahN" - ], - [ - "gene_synonym", - "ECK0326" - ], - [ - "gene_synonym", - "NP_414862.1" - ], - [ - "gene_synonym", - "GI:16128313" - ], - [ - "gene_synonym", - "EcoGene:EG13598" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75693" - ], - [ - "gene_synonym", - "JW0320" - ], - [ - "gene_synonym", - "GeneID:944968" - ], - [ - "gene_synonym", - "b0328" - ] - ], - "dna_sequence": "ATGATGCAGTTAGTTCACTTATTTATGGATGAAATCACTATGGATCCTTTGCATGCCGTTTACCTGACCGTAGGACTGTTCGTGATTACTTTTTTTAATCCGGGAGCCAATCTCTTTGTGGTAGTACAAACCAGCCTGGCTTCCGGTCGACGCGCAGGGGTGCTGACCGGGCTGGGCGTGGCGCTGGGCGATGCATTTTATTCCGGGTTGGGTTTGTTTGGTCTTGCAACGCTAATTACGCAGTGTGAGGAGATTTTTTCGCTTATCAGAATCGTCGGCGGCGCTTATCTCTTATGGTTTGCGTGGTGCAGCATGCGCCGCCAGTCAACACCGCAAATGAGCACACTACAACAACCGATTAGCGCCCCCTGGTATGTCTTTTTTCGCCGCGGATTAATTACCGATCTCTCTAACCCGCAAACCGTTTTATTTTTTATCAGTATTTTCTCAGTAACATTAAATGCCGAAACACCAACATGGGCACGTTTAATGGCCTGGGCGGGGATTGTGCTCGCATCAATTATCTGGCGAGTTTTTCTTAGTCAGGCGTTTTCTTTGCCCGCTGTGCGTCGTGCTTATGGGCGTATGCAACGCGTTGCCAGTCGGGTTATTGGTGCAATTATTGGTGTATTCGCGCTACGCCTGATTTACGAAGGGGTGACGCAGCGGTGA", - "dna_sequence_length": 672, - "functions": [ - "amino acid exporter for proline, lysine, glutamate, homoserine" - ], - "id": "CDS_326", - "location": [ - [ - "NC_000913", - 346337, - "-", - 672 - ] - ], - "md5": "daf5ebc0a667e4396f90e0194c25051b", - "parent_gene": "", - "protein_md5": "b531e00f95f85a5ec05889314c227143", - "protein_translation": "MMQLVHLFMDEITMDPLHAVYLTVGLFVITFFNPGANLFVVVQTSLASGRRAGVLTGLGVALGDAFYSGLGLFGLATLITQCEEIFSLIRIVGGAYLLWFAWCSMRRQSTPQMSTLQQPISAPWYVFFRRGLITDLSNPQTVLFFISIFSVTLNAETPTWARLMAWAGIVLASIIWRVFLSQAFSLPAVRRAYGRMQRVASRVIGAIIGVFALRLIYEGVTQR", - "protein_translation_length": 223, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001130" - ], - [ - "gene_synonym", - "GeneID:944985" - ], - [ - "gene_synonym", - "yahO" - ], - [ - "gene_synonym", - "ECK0327" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75694" - ], - [ - "gene_synonym", - "EcoGene:EG13599" - ], - [ - "gene_synonym", - "GI:16128314" - ], - [ - "gene_synonym", - "JW0321" - ], - [ - "gene_synonym", - "NP_414863.1" - ], - [ - "gene_synonym", - "b0329" - ] - ], - "dna_sequence": "ATGAAAATAATCTCTAAAATGTTAGTCGGTGCGTTAGCGTTAGCCGTTACCAATGTCTATGCCGCTGAATTGATGACCAAAGCGGAATTTGAAAAAGTTGAATCGCAGTATGAAAAAATAGGTGATATTTCAACCAGCAATGAAATGTCGACTGCAGATGCAAAAGAAGATTTGATCAAAAAAGCGGATGAAAAAGGGGCTGATGTGTTGGTACTGACCTCCGGTCAAACTGACAATAAGATCCACGGCACGGCAAATATTTATAAGAAGAAGTAA", - "dna_sequence_length": 276, - "functions": [ - "periplasmic protein, function unknown, YhcN family" - ], - "id": "CDS_327", - "location": [ - [ - "NC_000913", - 346484, - "+", - 276 - ] - ], - "md5": "cf779ac811c9de1a998c6ef0db023590", - "parent_gene": "", - "protein_md5": "17a73fa6504185e959ec2bc37e59a4af", - "protein_translation": "MKIISKMLVGALALAVTNVYAAELMTKAEFEKVESQYEKIGDISTSNEMSTADAKEDLIKKADEKGADVLVLTSGQTDNKIHGTANIYKKK", - "protein_translation_length": 91, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001133" - ], - [ - "gene_synonym", - "ECK0328" - ], - [ - "gene_synonym", - "GeneID:944987" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77743" - ], - [ - "gene_synonym", - "EcoGene:EG13600" - ], - [ - "gene_synonym", - "NP_414864.1" - ], - [ - "gene_synonym", - "prpR" - ], - [ - "gene_synonym", - "b0330" - ], - [ - "gene_synonym", - "yahP" - ], - [ - "gene_synonym", - "JW0322" - ], - [ - "gene_synonym", - "GI:16128315" - ] - ], - "dna_sequence": "ATGGCACATCCACCACGGCTTAATGACGACAAACCGGTTATCTGGACGGTATCTGTAACGCGCCTGTTCGAGCTGTTTCGCGATATCAGCCTCGAGTTTGATCACCTGGCGAACATTACCCCTATTCAGCTTGGCTTTGAAAAAGCAGTGACCTACATCCGCAAGAAACTGGCAAACGAACGCTGTGACGCCATCATCGCGGCTGGCTCTAACGGCGCGTACCTGAAAAGCCGCCTGTCAGTGCCAGTTATTTTGATTAAACCGAGCGGCTACGATGTGTTACAGGCACTGGCAAAAGCCGGAAAACTCACCTCTTCTATCGGCGTTGTCACCTATCAGGAAACCATTCCAGCGCTGGTGGCGTTTCAAAAAACCTTTAATTTGCGCCTCGACCAACGTAGCTACATTACCGAGGAAGACGCACGCGGGCAGATTAACGAGCTAAAAGCTAACGGCACCGAAGCGGTGGTCGGCGCAGGGCTGATTACCGATTTGGCAGAAGAAGCCGGAATGACCGGAATTTTTATCTATTCCGCCGCCACCGTGCGCCAGGCGTTCAGCGATGCGCTGGATATGACGCGCATGTCGTTACGCCATAACACTCACGATGCCACCCGCAACGCCCTGCGTACTCGTTACGTGCTGGGCGATATGCTCGGTCAATCACCACAGATGGAACAAGTACGGCAGACTATTTTGCTGTATGCCCGCTCCAGTGCGGCGGTGTTGATTGAGGGGGAAACGGGGACGGGCAAAGAGCTGGCGGCCCAGGCGATTCATCGGGAATATTTTGCCCGCCACGATGCGCGACAGGGCAAAAAGTCGCATCCGTTTGTTGCCGTCAACTGCGGGGCGATTGCCGAATCGCTGCTGGAAGCAGAACTGTTTGGCTATGAGGAAGGGGCGTTTACCGGCTCGCGACGCGGAGGTCGCGCCGGGCTGTTCGAAATTGCCCACGGCGGTACGCTGTTTCTGGATGAGATTGGCGAAATGCCGCTACCTTTGCAGACCCGGCTGCTGCGGGTGCTGGAAGAAAAAGAGGTCACCCGCGTCGGCGGGCATCAGCCTGTTCCGGTAGATGTACGGGTCATTAGCGCCACTCACTGCAATCTGGAAGAAGATATGCAGCAAGGACGTTTTCGCCGTGATCTGTTTTATCGGCTGAGTATTTTGCGTCTGCAATTGCCACCACTGCGCGAGCGGGTGGCGGATATTCTTCCGCTGGCGGAAAGCTTTTTGAAAGTGTCTCTGGCGGCGCTCTCCGCCCCATTTTCTGCTGCATTACGCCAGGGGTTACAGGCAAGTGAAACTGTGCTGCTGCACTACGACTGGCCAGGCAATATTCGTGAACTGCGCAATATGATGGAACGACTGGCGCTGTTTTTAAGTGTGGAACCGACGCCGGATTTAACGCCGCAGTTTATGCAACTGCTACTGCCGGAACTGGCGCGCGAGTCGGCGAAAACTCCCGCTCCACGCTTACTGACACCACAACAGGCACTGGAGAAATTTAATGGCGATAAAACAGCAGCGGCGAATTATTTAGGCATCAGCCGGACGACGTTCTGGCGGCGGCTGAAAAGCTGA", 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"gene_synonym", - "GeneID:944990" - ], - [ - "gene_synonym", - "ASAP:ABE-0001138" - ], - [ - "gene_synonym", - "ECK0329" - ], - [ - "gene_synonym", - "JW0323" - ], - [ - "gene_synonym", - "EcoGene:EG13601" - ], - [ - "gene_synonym", - "NP_414865.1" - ], - [ - "gene_synonym", - "b0331" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77541" - ], - [ - "gene_synonym", - "yahQ" - ], - [ - "gene_synonym", - "prpB" - ] - ], - "dna_sequence": "ATGTCTCTACACTCTCCAGGTAAAGCGTTTCGCGCTGCACTGACTAAAGAAAATCCATTGCAGATTGTTGGCACCATCAACGCTAATCATGCGCTGTTGGCGCAGCGTGCCGGATATCAGGCAATTTATCTTTCTGGCGGTGGCGTGGCGGCAGGTTCGCTGGGGCTGCCCGATCTCGGTATTTCTACCCTTGATGATGTGCTGACCGACATTCGCCGTATCACCGACGTTTGTTCGCTGCCGCTGCTGGTGGATGCGGATATCGGTTTTGGTTCTTCGGCCTTTAACGTGGCGCGCACCGTGAAATCGATGATTAAAGCCGGTGCGGCAGGATTGCATATTGAAGATCAGGTTGGTGCGAAACGCTGCGGTCATCGTCCGAATAAAGCGATCGTCTCGAAAGAAGAGATGGTGGATCGGATCCGCGCGGCGGTGGATGCGAAAACCGATCCTGATTTTGTGATCATGGCGCGCACCGATGCTCTGGCGGTAGAGGGGCTGGATGCGGCGATCGAGCGTGCGCAGGCCTATGTTGAAGCGGGTGCCGAGATGTTGTTCCCGGAGGCGATTACCGAACTCGCCATGTACCGCCAGTTTGCCGATGCGGTGCAGGTGCCGATCCTCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAA", - "dna_sequence_length": 891, - "functions": [ - "2-methylisocitrate lyase" - ], - "id": "CDS_329", - "location": [ - [ - "NC_000913", - 348682, - "+", - 891 - ] - ], - "md5": "bb2ef7de19e8cf09ed2469b510d84c40", - "parent_gene": "", - "protein_md5": "1c117956dd932bba0dc42cc8709188d8", - "protein_translation": "MSLHSPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNVLRQEGTQKSVIDTMQTRNELYESINYYQYEEKLDNLFARSQVK", - "protein_translation_length": 296, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "prpC" - ], - [ - "gene_synonym", - "GeneID:947528" - ], - [ - "gene_synonym", - "ECK0330" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31660" - ], - [ - "gene_synonym", - "yahS" - ], - [ - "gene_synonym", - "b0333" - ], - [ - "gene_synonym", - "GI:16128318" - ], - [ - "gene_synonym", - "NP_414867.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001148" - ], - [ - "gene_synonym", - "yzzD" - ], - [ - "gene_synonym", - "JW0324" - ], - [ - "gene_synonym", - "EcoGene:EG11756" - ] - ], - "dna_sequence": "ATGAGCGACACAACGATCCTGCAAAACAGTACCCATGTCATTAAACCGAAAAAATCTGTGGCACTTTCTGGCGTTCCGGCGGGCAATACGGCGCTCTGCACCGTGGGTAAAAGTGGCAATGACCTGCATTACCGCGGCTACGATATTCTTGATCTGGCGAAACATTGCGAATTTGAAGAAGTGGCGCATCTGCTGATCCACGGCAAACTGCCGACCCGTGACGAACTCGCCGCTTACAAAACGAAACTGAAAGCCCTGCGCGGTTTACCGGCTAACGTGCGTACCGTGCTGGAAGCCTTACCGGCGGCGTCGCACCCGATGGATGTTATGCGCACCGGTGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCATACCGTCTCTGGCGCGCGGGATATTGCCGACAAACTGCTGGCGTCGCTTAGCTCGATTCTCCTTTATTGGTATCACTACAGCCACAACGGCGAACGCATCCAACCGGAAACCGATGACGACTCCATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCATCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTTAACGCCTCCACCTTTACCAGTCGGGTGATTGCGGGCACCGGCTCTGATATGTATTCCGCGATTATTGGCGCGATTGGCGCACTGCGCGGGCCAAAACACGGCGGGGCGAATGAAGTGTCGCTGGAGATCCAGCAACGCTACGAAACGCCGGACGAAGCCGAAGCAGATATCCGCAAGCGCGTGGAAAACAAAGAAGTGGTCATTGGTTTTGGTCATCCGGTTTACACCATCGCTGACCCGCGCCACCAGGTGATTAAACGTGTGGCGAAGCAGCTCTCGCAGGAAGGCGGCTCGCTGAAGATGTACAACATCGCCGATCGCCTGGAAACGGTGATGTGGGAGAGCAAAAAGATGTTCCCCAATCTCGACTGGTTCTCTGCTGTTTCCTACAACATGATGGGCGTTCCCACCGAGATGTTCACACCACTGTTTGTTATCGCCCGCGTCACCGGCTGGGCGGCGCACATTATCGAACAACGTCAGGACAACAAAATTATCCGTCCTTCCGCCAATTATGTTGGACCGGAAGACCGCCCGTTTGTCGCGCTGGATAAGCGCCAGTAA", - "dna_sequence_length": 1170, - "functions": [ - "2-methylcitrate synthase" - ], - "id": "CDS_330", - "location": [ - [ - "NC_000913", - 350012, - "+", - 1170 - ] - ], - "md5": "42f10effe6288bdb4341d89f7890a7dd", - "parent_gene": "", - "protein_md5": "d7cbd5caf74a75301da0d8b5cae459f3", - "protein_translation": "MSDTTILQNSTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHYRGYDILDLAKHCEFEEVAHLLIHGKLPTRDELAAYKTKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCTLPEKEGHTVSGARDIADKLLASLSSILLYWYHYSHNGERIQPETDDDSIGGHFLHLLHGEKPSQSWEKAMHISLVLYAEHEFNASTFTSRVIAGTGSDMYSAIIGAIGALRGPKHGGANEVSLEIQQRYETPDEAEADIRKRVENKEVVIGFGHPVYTIADPRHQVIKRVAKQLSQEGGSLKMYNIADRLETVMWESKKMFPNLDWFSAVSYNMMGVPTEMFTPLFVIARVTGWAAHIIEQRQDNKIIRPSANYVGPEDRPFVALDKRQ", - "protein_translation_length": 389, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945931" - ], - [ - "gene_synonym", - "prpD" - ], - [ - "gene_synonym", - "EcoGene:EG13603" - ], - [ - "gene_synonym", - "NP_414868.1" - ], - [ - "gene_synonym", - "ECK0331" - ], - [ - "gene_synonym", - "acnC" - ], - [ - "gene_synonym", - "b0334" - ], - [ - "gene_synonym", - "yahT" - ], - [ - "gene_synonym", - "ASAP:ABE-0001152" - ], - [ - "gene_synonym", - "GI:16128319" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77243" - ], - [ - "gene_synonym", - "JW0325" - ] - ], - "dna_sequence": "ATGTCAGCTCAAATCAACAACATCCGCCCGGAATTTGATCGTGAAATCGTTGATATCGTCGATTACGTCATGAACTACGAAATCAGCTCTAAAGTGGCCTACGACACCGCACATTACTGCCTGCTCGACACGCTCGGCTGCGGTCTGGAAGCTCTCGAATACCCGGCCTGTAAAAAACTGCTGGGGCCAATTGTTCCCGGCACCGTCGTACCCAACGGCGTGCGCGTCCCCGGAACTCAGTTCCAGCTCGACCCCGTCCAGGCGGCATTTAACATCGGCGCGATGATCCGCTGGCTCGATTTCAACGATACCTGGCTGGCGGCGGAGTGGGGCCATCCTTCCGACAACCTCGGCGGCATTCTGGCAACGGCGGACTGGCTTTCGCGCAACGCGGTCGCCAGCGGCAAAGCGCCGTTGACCATGAAACAGGTGCTGACCGCAATGATCAAAGCCCATGAAATTCAGGGCTGCATCGCGCTGGAAAACTCCTTTAACCGCGTCGGCCTCGACCACGTTCTGTTAGTGAAAGTGGCTTCCACCGCCGTGGTCGCCGAAATGCTCGGCCTGACCCGCGAGGAAATTCTCAACGCCGTTTCGCTGGCGTGGGTGGACGGTCAGTCGCTGCGCACCTATCGCCATGCGCCGAACACCGGCACGCGTAAATCCTGGGCGGCGGGCGATGCCACTTCCCGCGCGGTACGTCTGGCACTGATGGCGAAAACGGGCGAAATGGGTTACCCGTCAGCCCTGACTGCGCCGGTGTGGGGCTTCTACGACGTCTCCTTTAAAGGTGAATCGTTCCGCTTCCAGCGCCCGTACGGTTCCTACGTTATGGAAAATGTGCTGTTCAAAATCTCCTTCCCGGCGGAGTTCCACTCCCAGACGGCAGTTGAAGCAGCGATGACGCTCTATGAACAGATGCAGGCAGCAGGCAAAACGGCGGCGGATATCGAAAAAGTGACCATTCGCACCCACGAAGCCTGTATTCGCATCATCGACAAAAAAGGGCCGCTCAATAACCCGGCAGACCGCGATCACTGCATTCAGTACATGGTGGCGATCCCGCTGCTATTCGGGCGCTTAACGGCGGCAGATTACGAGGACAACGTTGCGCAAGATAAACGCATTGACGCCCTGCGCGAGAAGATCAATTGCTTTGAAGATCCGGCATTTACCGCTGACTACCACGACCCGGAAAAACGCGCCATCGCCAATGCCATTACCCTTGAGTTCACCGACGGCACACGATTTGAAGAAGTGGTGGTGGAGTACCCCATTGGTCATGCTCGCCGCCGTCAGGATGGTATTCCGAAACTGGTCGATAAATTCAAAATCAATCTCGCGCGCCAGTTCCCGACTCGCCAACAGCAGCGCATTCTGGAGGTTTCTCTCGACAGAGCTCGCCTGGAACAGATGCCGGTCAATGAGTATCTCGACCTGTACGTCATTTAA", 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- [ - "gene_synonym", - "GI:16128320" - ], - [ - "gene_synonym", - "EcoGene:EG13604" - ], - [ - "gene_synonym", - "b0335" - ], - [ - "gene_synonym", - "ASAP:ABE-0001154" - ], - [ - "gene_synonym", - "yahU" - ], - [ - "gene_synonym", - "NP_414869.1" - ], - [ - "gene_synonym", - "JW0326" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77495" - ] - ], - "dna_sequence": "ATGTCTTTTAGCGAATTTTATCAGCGTTCGATTAACGAACCGGAGCAGTTCTGGGCCGAGCAGGCCCGGCGTATTGACTGGCAGACGCCCTTTACGCAAACGCTCGATCACAGCAATCCGCCGTTTGCCCGTTGGTTTTGTGAAGGCCGAACCAACTTGTGCCACAACGCCATCGACCGCTGGCTGGAGAAACAGCCAGAGGCGCTGGCGCTGATTGCCGTCTCTTCGGAAACAGAAGAAGAGCGCACCTTTACCTTTCGTCAGCTGCATGACGAAGTGAACGCGGTGGCCTCAATGTTGCGTTCATTGGGTGTGCAGCGCGGCGATCGGGTGCTGGTGTATATGCCGATGATTGCCGAAGCGCATATTACTCTGCTGGCCTGCGCGCGCATTGGCGCTATTCACTCGGTGGTGTTTGGTGGATTTGCCTCGCACAGCGTGGCGGCGCGAATTGATGACGCTAAACCGGTGCTGATTGTCTCGGCTGATGCCGGAGCGCGCGGTGGCAAAATCATTCCCTATAAAAAATTGCTCGACGATGCGATAAGTCAGGCGCAGCACCAGCCACGCCATGTTTTGCTGGTGGATCGCGGGCTGGCGAAAATGGCGCGCGTCAGCGGGCGGGATGTCGATTTCGCGTCGTTGCGCCATCAACACATCGGCGCGCGGGTACCGGTGGCGTGGCTGGAATCCAACGAAACCTCCTGCATTCTCTACACTTCCGGCACGACCGGCAAACCTAAAGGCGTGCAGCGTGACGTCGGCGGATATGCGGTGGCGCTGGCGACCTCGATGGACACCATTTTTGGCGGCAAAGCGGGCAGCGTGTTCTTTTGCGCATCGGATATCGGCTGGGTGGTGGGGCATTCGTATATCGTTTACGCGCCGCTGCTGGCGGGGATGGCGACTATCGTTTACGAAGGATTGCCGACCTGGCCGGACTGCGGCGTGTGGTGGACAATCGTCGAGAAATATCAGGTTAGCCGGATGTTCTCAGCGCCGACCGCCATTCGCGTGCTGAAAAAATTCCCTACCGCTGAAATTCGCAAACACGATCTCTCGTCGCTGGAAGTGCTCTATCTGGCTGGAGAACCGCTGGACGAGCCGACCGCCAGTTGGGTGAGCAATACGCTGGATGTGCCGGTCATCGACAACTACTGGCAGACCGAATCCGGCTGGCCGATTATGGCGATTGCTCGCGGTCTGGACGACAGGCCGACGCGTCTGGGAAGCCCCGGTGTGCCGATGTATGGCTATAACGTGCAGTTGCTTAATGAAGTCACCGGCGAACCGTGTGGCGTCAACGAGAAAGGGATGCTGGTGGTGGAAGGGCCGCTGCCGCCGGGGTGTATTCAGACCATCTGGGGCGACGACGGCCGCTTTGTGAAGACTTACTGGTCGCTGTTTTCCCGCCCGGTGTACGCCACCTTTGACTGGGGCATCCGTGACGCTGACGGTTATCACTTTATTCTCGGGCGCACTGACGATGTAATTAACGTTGCCGGGCATCGGCTGGGGACGCGCGAGATTGAAGAGAGTATCTCCAGCCATCCGGGCGTTGCCGAAGTGGCGGTGGTTGGGGTGAAAGATGCGCTGAAAGGGCAGGTGGCGGTGGCGTTTGTCATTCCGAAAGAGAGCGACAGTCTGGAAGATCGTGATGTGGCGCACTCGCAAGAGAAGGCGATTATGGCGCTGGTGGACAGCCAGATTGGCAACTTTGGCCGCCCGGCGCACGTCTGGTTTGTCTCGCAATTGCCAAAAACGCGATCCGGAAAAATGCTGCGCCGCACGATCCAGGCGATTTGCGAAGGACGCGATCCTGGAGATCTGACGACCATTGATGATCCTGCGTCGTTGGATCAGATCCGCCAGGCGATGGAAGAGTAG", - "dna_sequence_length": 1887, - "functions": [ - "propionate--CoA ligase" - ], - "id": "CDS_332", - "location": [ - [ - "NC_000913", - 352706, - "+", - 1887 - ] - ], - "md5": "643b4c713ff62bf582f50ded85fb6694", - "parent_gene": "", - "protein_md5": "d4dbd6598de83d83528ba1e7fa58c927", - "protein_translation": "MSFSEFYQRSINEPEQFWAEQARRIDWQTPFTQTLDHSNPPFARWFCEGRTNLCHNAIDRWLEKQPEALALIAVSSETEEERTFTFRQLHDEVNAVASMLRSLGVQRGDRVLVYMPMIAEAHITLLACARIGAIHSVVFGGFASHSVAARIDDAKPVLIVSADAGARGGKIIPYKKLLDDAISQAQHQPRHVLLVDRGLAKMARVSGRDVDFASLRHQHIGARVPVAWLESNETSCILYTSGTTGKPKGVQRDVGGYAVALATSMDTIFGGKAGSVFFCASDIGWVVGHSYIVYAPLLAGMATIVYEGLPTWPDCGVWWTIVEKYQVSRMFSAPTAIRVLKKFPTAEIRKHDLSSLEVLYLAGEPLDEPTASWVSNTLDVPVIDNYWQTESGWPIMAIARGLDDRPTRLGSPGVPMYGYNVQLLNEVTGEPCGVNEKGMLVVEGPLPPGCIQTIWGDDGRFVKTYWSLFSRPVYATFDWGIRDADGYHFILGRTDDVINVAGHRLGTREIEESISSHPGVAEVAVVGVKDALKGQVAVAFVIPKESDSLEDRDVAHSQEKAIMALVDSQIGNFGRPAHVWFVSQLPKTRSGKMLRRTIQAICEGRDPGDLTTIDDPASLDQIRQAMEE", - "protein_translation_length": 628, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "codB" - ], - [ - "gene_synonym", - "GeneID:944994" - ], - [ - "gene_synonym", - "ECK0333" - ], - [ - "gene_synonym", - "JW0327" - ], - [ - "gene_synonym", - "b0336" - ], - [ - "gene_synonym", - "EcoGene:EG11327" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA82" - ], - [ - "gene_synonym", - "NP_414870.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001159" - ], - [ - "gene_synonym", - "GI:16128321" - ] - ], - "dna_sequence": "GTGTCGCAAGATAACAACTTTAGCCAGGGGCCAGTCCCGCAGTCGGCGCGGAAAGGGGTATTGGCATTGACGTTCGTCATGCTGGGATTAACCTTCTTTTCCGCCAGTATGTGGACCGGCGGCACTCTCGGAACCGGTCTTAGCTATCATGATTTCTTCCTCGCAGTTCTCATCGGTAATCTTCTCCTCGGTATTTACACTTCATTTCTCGGTTACATTGGCGCAAAAACCGGCCTGACCACTCATCTTCTTGCTCGCTTCTCGTTTGGTGTTAAAGGCTCATGGCTGCCTTCACTGCTACTGGGCGGAACTCAGGTTGGCTGGTTTGGCGTCGGTGTGGCGATGTTTGCCATTCCGGTGGGTAAGGCAACCGGGCTGGATATTAATTTGCTGATTGCCGTTTCCGGTTTACTGATGACCGTCACCGTCTTTTTTGGCATTTCGGCGCTGACGGTTCTTTCGGTGATTGCGGTTCCGGCTATCGCCTGCCTGGGCGGTTATTCCGTGTGGCTGGCTGTTAACGGCATGGGCGGCCTGGACGCATTAAAAGCGGTCGTTCCCGCACAACCGTTAGATTTCAATGTCGCGCTGGCGCTGGTTGTGGGGTCATTTATCAGTGCGGGTACGCTCACCGCTGACTTTGTCCGGTTTGGTCGCAATGCCAAACTGGCGGTGCTGGTGGCGATGGTGGCCTTTTTCCTCGGCAACTCGTTGATGTTTATTTTCGGTGCAGCGGGCGCTGCGGCACTGGGCATGGCGGATATCTCTGATGTGATGATTGCTCAGGGCCTGCTGCTGCCTGCGATTGTGGTGCTGGGGCTGAATATCTGGACCACCAACGATAACGCACTCTATGCGTCGGGTTTAGGTTTCGCCAACATTACCGGGATGTCGAGCAAAACCCTTTCGGTAATCAACGGTATTATCGGTACGGTCTGCGCATTATGGCTGTATAACAATTTTGTCGGCTGGTTGACCTTCCTTTCGGCAGCTATTCCTCCAGTGGGTGGCGTGATCATCGCCGACTATCTGATGAACCGTCGCCGCTATGAGCACTTTGCGACCACGCGTATGATGAGTGTCAATTGGGTGGCGATTCTGGCGGTCGCCTTGGGGATTGCTGCAGGCCACTGGTTACCGGGAATTGTTCCGGTCAACGCGGTATTAGGTGGCGCGCTGAGCTATCTGATCCTTAACCCGATTTTGAATCGTAAAACGACAGCAGCAATGACGCATGTGGAGGCTAACAGTGTCGAATAA", - "dna_sequence_length": 1260, - "functions": [ - "cytosine transporter" - ], - "id": "CDS_333", - "location": [ - [ - "NC_000913", - 354922, - "+", - 1260 - ] - ], - "md5": "de2c81d0d182e6af25ddf26d3b62414f", - "parent_gene": "", - "protein_md5": "6858c3474c4dbbd401c74617222094b0", - "protein_translation": "MSQDNNFSQGPVPQSARKGVLALTFVMLGLTFFSASMWTGGTLGTGLSYHDFFLAVLIGNLLLGIYTSFLGYIGAKTGLTTHLLARFSFGVKGSWLPSLLLGGTQVGWFGVGVAMFAIPVGKATGLDINLLIAVSGLLMTVTVFFGISALTVLSVIAVPAIACLGGYSVWLAVNGMGGLDALKAVVPAQPLDFNVALALVVGSFISAGTLTADFVRFGRNAKLAVLVAMVAFFLGNSLMFIFGAAGAAALGMADISDVMIAQGLLLPAIVVLGLNIWTTNDNALYASGLGFANITGMSSKTLSVINGIIGTVCALWLYNNFVGWLTFLSAAIPPVGGVIIADYLMNRRRYEHFATTRMMSVNWVAILAVALGIAAGHWLPGIVPVNAVLGGALSYLILNPILNRKTTAAMTHVEANSVE", - "protein_translation_length": 419, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944996" - ], - [ - "gene_synonym", - "codA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25524" - ], - [ - "gene_synonym", - "JW0328" - ], - [ - "gene_synonym", - "ECK0334" - ], - [ - "gene_synonym", - "ASAP:ABE-0001161" - ], - [ - "gene_synonym", - "b0337" - ], - [ - "gene_synonym", - "EcoGene:EG11326" - ], - [ - "gene_synonym", - "NP_414871.1" - ], - [ - "gene_synonym", - "GI:16128322" - ] - ], - "dna_sequence": "GTGTCGAATAACGCTTTACAAACAATTATTAACGCCCGGTTACCAGGCGAAGAGGGGCTGTGGCAGATTCATCTGCAGGACGGAAAAATCAGCGCCATTGATGCGCAATCCGGCGTGATGCCCATAACTGAAAACAGCCTGGATGCCGAACAAGGTTTAGTTATACCGCCGTTTGTGGAGCCACATATTCACCTGGACACCACGCAAACCGCCGGACAACCGAACTGGAATCAGTCCGGCACGCTGTTTGAAGGCATTGAACGCTGGGCCGAGCGCAAAGCGTTATTAACCCATGACGATGTGAAACAACGCGCATGGCAAACGCTGAAATGGCAGATTGCCAACGGCATTCAGCATGTGCGTACCCATGTCGATGTTTCGGATGCAACGCTAACTGCGCTGAAAGCAATGCTGGAAGTGAAGCAGGAAGTCGCGCCGTGGATTGATCTGCAAATCGTCGCCTTCCCTCAGGAAGGGATTTTGTCGTATCCCAACGGTGAAGCGTTGCTGGAAGAGGCGTTACGCTTAGGGGCAGATGTAGTGGGGGCGATTCCGCATTTTGAATTTACCCGTGAATACGGCGTGGAGTCGCTGCATAAAACCTTCGCCCTGGCGCAAAAATACGACCGTCTCATCGACGTTCACTGTGATGAGATCGATGACGAGCAGTCGCGCTTTGTCGAAACCGTTGCTGCCCTGGCGCACCATGAAGGCATGGGCGCGCGAGTCACCGCCAGCCACACCACGGCAATGCACTCCTATAACGGGGCGTATACCTCACGCCTGTTCCGCTTGCTGAAAATGTCCGGTATTAACTTTGTCGCCAACCCGCTGGTCAATATTCATCTGCAAGGACGTTTCGATACGTATCCAAAACGTCGCGGCATCACGCGCGTTAAAGAGATGCTGGAGTCCGGCATTAACGTCTGCTTTGGTCACGATGATGTCTTCGATCCGTGGTATCCGCTGGGAACGGCGAATATGCTGCAAGTGCTGCATATGGGGCTGCATGTTTGCCAGTTGATGGGCTACGGGCAGATTAACGATGGCCTGAATTTAATCACCCACCACAGCGCAAGGACGTTGAATTTGCAGGATTACGGCATTGCCGCCGGAAACAGCGCCAACCTGATTATCCTGCCGGCTGAAAATGGGTTTGATGCGCTGCGCCGTCAGGTTCCGGTACGTTATTCGGTACGTGGCGGCAAGGTGATTGCCAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGA", - "dna_sequence_length": 1284, - "functions": [ - "cytosine/isoguanine deaminase" - ], - "id": "CDS_334", - "location": [ - [ - "NC_000913", - 356171, - "+", - 1284 - ] - ], - "md5": "429414425322759d425f2c6007ee9af1", - "parent_gene": "", - "protein_md5": "a6e25223f14065f44e16af6ec7717ba1", - "protein_translation": "MSNNALQTIINARLPGEEGLWQIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQDYGIAAGNSANLIILPAENGFDALRRQVPVRYSVRGGKVIASTQPAQTTVYLEQPEAIDYKR", - "protein_translation_length": 427, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27111" - ], - [ - "gene_synonym", - "NP_414872.3" - ], - [ - "gene_synonym", - "cynR" - ], - [ - "gene_synonym", - "ECK0335" - ], - [ - "gene_synonym", - "EcoGene:EG11421" - ], - [ - "gene_synonym", - "GeneID:945001" - ], - [ - "gene_synonym", - "GI:157783149" - ], - [ - "gene_synonym", - "ASAP:ABE-0001165" - ], - [ - "gene_synonym", - "b0338" - ], - [ - "gene_synonym", - "JW5894" - ] - ], - "dna_sequence": "ATGCTCTCTCGACATATCAATTATTTTCTTGCCGTGGCTGAACATGGCAGCTTCACCCGTGCCGCCAGTGCGTTGCACGTCTCCCAACCTGCGCTTTCCCAGCAGATTCGCCAGTTAGAGGAGAGTTTAGGCGTGCCGCTGTTTGACCGTAGCGGGCGAACGATTCGTCTCACTGATGCAGGAGAAGTCTGGCGACAGTACGCCAGCCGGGCGTTACAGGAACTGGGGGCGGGTAAACGGGCGATTCATGATGTTGCCGATCTGACGCGAGGATCGCTGCGTATCGCCGTCACCCCCACCTTTACGAGCTACTTTATCGGCCCCTTAATGGCGGATTTCTATGCGCGCTATCCCAGCATCACGCTCCAGCTACAGGAAATGTCGCAGGAGAAAATCGAGGATATGCTTTGCCGCGACGAGTTGGACGTTGGGATTGCCTTCGCGCCTGTGCATTCGCCGGAGCTGGAGGCAATTCCTTTACTGACAGAAAGTTTAGCGTTAGTCGTGGCGCAACATCATCCGCTGGCCGTCCATGAACAGGTGGCGTTGAGTCGCTTGCATGATGAAAAACTGGTCCTGCTCAGCGCGGAATTTGCCACCAGAGAGCAAATTGACCACTACTGCGAGAAAGCGGGGCTACATCCACAGGTGGTCATTGAGGCGAACTCAATTAGCGCGGTTCTGGAGCTGATTCGCCGCACTTCCCTTTCCACATTGTTACCAGCAGCGATTGCCACACAACATGACGGGCTTAAAGCTATTTCTCTTGCCCCGCCACTACTGGAGAGAACGGCGGTTTTGTTGCGGCGGAAAAATAGCTGGCAGACAGCCGCCGCGAAGGCATTTTTGCACATGGCGTTGGATAAATGCGCGGTTGTTGGCGGAAATGAATCACGGTAG", - "dna_sequence_length": 900, - "functions": [ - "transcriptional activator of cyn operon", - "autorepressor" - ], - "id": "CDS_335", - "location": [ - [ - "NC_000913", - 358690, - "-", - 900 - ] - ], - "md5": "5520eb431efea2b8b34a8f113279fd5c", - "parent_gene": "", - "protein_md5": "4f3949c2d64173f0904786f1e9fb240f", - "protein_translation": "MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPTFTSYFIGPLMADFYARYPSITLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPELEAIPLLTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPAAIATQHDGLKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVVGGNESR", - "protein_translation_length": 299, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946548" - ], - [ - "gene_synonym", - "cynT" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABE9" - ], - [ - "gene_synonym", - "ECK0336" - ], - [ - "gene_synonym", - "NP_414873.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001171" - ], - [ - "gene_synonym", - "GI:16128324" - ], - [ - "gene_synonym", - "JW0330" - ], - [ - "gene_synonym", - "b0339" - ], - [ - "gene_synonym", - "EcoGene:EG10176" - ] - ], - "dna_sequence": "GTGAAAGAGATTATTGATGGATTCCTTAAATTCCAGCGCGAGGCATTTCCGAAGCGGGAAGCCTTGTTTAAACAGCTGGCGACACAGCAAAGCCCGCGCACACTTTTTATCTCCTGCTCCGACAGCCGTCTGGTCCCTGAGCTGGTGACGCAACGTGAGCCTGGCGATCTGTTCGTTATTCGCAACGCGGGCAATATCGTCCCTTCCTACGGGCCGGAACCCGGTGGCGTTTCTGCTTCGGTGGAGTATGCCGTCGCTGCGCTTCGGGTATCTGACATTGTGATTTGTGGTCATTCCAACTGTGGCGCGATGACCGCCATTGCCAGCTGTCAGTGCATGGACCATATGCCTGCCGTCTCCCACTGGCTGCGTTATGCCGATTCAGCCCGCGTCGTTAATGAGGCGCGCCCGCATTCCGATTTACCGTCAAAAGCTGCGGCGATGGTACGTGAAAACGTCATTGCTCAGTTGGCTAATTTGCAAACTCATCCATCGGTGCGCCTGGCGCTCGAAGAGGGGCGGATCGCCCTGCACGGCTGGGTCTACGACATTGAAAGCGGCAGCATCGCAGCTTTTGACGGCGCAACCCGCCAGTTTGTGCCACTGGCCGCTAATCCTCGCGTTTGTGCCATACCGCTACGCCAACCGACCGCAGCGTAA", - "dna_sequence_length": 660, - "functions": [ - "carbonic anhydrase" - ], - "id": "CDS_336", - "location": [ - [ - "NC_000913", - 358799, - "+", - 660 - ] - ], - "md5": "27724c05b6f3622a93fe1416df443022", - "parent_gene": "", - "protein_md5": "a309cdb0fb30afb9f46c21965e99a2c6", - "protein_translation": "MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYGPEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQCMDHMPAVSHWLRYADSARVVNEARPHSDLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHGWVYDIESGSIAAFDGATRQFVPLAANPRVCAIPLRQPTAA", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0340" - ], - [ - "gene_synonym", - "cnt" - ], - [ - "gene_synonym", - "EcoGene:EG10175" - ], - [ - "gene_synonym", - "ASAP:ABE-0001173" - ], - [ - "gene_synonym", - "cynS" - ], - [ - "gene_synonym", - "ECK0337" - ], - [ - "gene_synonym", - "JW0331" - ], - [ - "gene_synonym", - "GI:16128325" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00816" - ], - [ - "gene_synonym", - "NP_414874.1" - ], - [ - "gene_synonym", - "GeneID:948998" - ] - ], - "dna_sequence": "ATGATTCAGTCACAAATTAACCGCAATATTCGTCTTGATCTTGCCGATGCCATTTTGCTCAGCAAAGCTAAAAAAGATCTCTCATTTGCCGAGATTGCCGACGGCACCGGTCTGGCAGAAGCCTTTGTAACCGCGGCTTTGCTGGGTCAGCAGGCGCTTCCTGCCGACGCCGCCCGCCTGGTCGGGGCGAAGCTGGATCTCGACGAAGACTCCATTCTACTGTTGCAGATGATTCCACTGCGTGGCTGCATTGATGACCGTATTCCAACTGACCCAACGATGTATCGTTTCTATGAAATGTTGCAGGTGTACGGTACAACCCTGAAAGCGTTGGTTCATGAGAAATTTGGCGATGGCATTATTAGCGCGATTAACTTCAAACTCGACGTTAAGAAAGTGGCGGACCCGGAAGGTGGCGAACGTGCGGTCATCACCTTAGATGGTAAATATCTGCCGACCAAACCGTTCTGA", - "dna_sequence_length": 471, - "functions": [ - "cyanate aminohydrolase" - ], - "id": "CDS_337", - "location": [ - [ - "NC_000913", - 359489, - "+", - 471 - ] - ], - "md5": "1de407aad4499b1d9ebd5a7003601663", - "parent_gene": "", - "protein_md5": "1a86bc8e069e57eaa8c799523a09c105", - "protein_translation": "MIQSQINRNIRLDLADAILLSKAKKDLSFAEIADGTGLAEAFVTAALLGQQALPADAARLVGAKLDLDEDSILLLQMIPLRGCIDDRIPTDPTMYRFYEMLQVYGTTLKALVHEKFGDGIISAINFKLDVKKVADPEGGERAVITLDGKYLPTKPF", - "protein_translation_length": 156, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0341" - ], - [ - "gene_synonym", - "ECK0338" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17583" - ], - [ - "gene_synonym", - "cynX" - ], - [ - "gene_synonym", - "ASAP:ABE-0001175" - ], - [ - "gene_synonym", - "NP_414875.1" - ], - [ - "gene_synonym", - "GeneID:946770" - ], - [ - "gene_synonym", - "GI:16128326" - ], - [ - "gene_synonym", - "JW0332" - ], - [ - "gene_synonym", - "EcoGene:EG10177" - ] - ], - "dna_sequence": "ATGCTGCTGGTACTGGTGCTGATTGGTCTTAATATGCGACCACTGCTCACCTCCGTCGGGCCACTGCTACCGCAATTGCGCCAGGCGAGCGGAATGAGCTTTAGCGTGGCTGCCCTGTTGACCGCTCTGCCGGTGGTTACCATGGGCGGGCTGGCGCTGGCCGGAAGCTGGCTTCATCAGCATGTCAGCGAACGTCGCAGTGTCGCCATCAGTCTGTTGCTGATTGCCGTCGGTGCATTGATGCGTGAGCTTTACCCGCAAAGTGCGCTGCTGCTTAGCAGCGCACTGCTTGGTGGGGTGGGGATCGGCATCATTCAGGCGGTGATGCCTTCGGTGATTAAACGGCGGTTTCAGCAGCGCACGCCACTGGTGATGGGGCTGTGGTCCGCGGCTCTGATGGGCGGCGGTGGGCTTGGTGCCGCCATAACGCCCTGGTTAGTTCAACATAGCGAAACCTGGTATCAAACACTCGCCTGGTGGGCGCTGCCTGCCGTTGTTGCGCTCTTTGCCTGGTGGTGGCAAAGCGCCCGCGAGGTCGCCTCTTCCCACAAGACAACAACCACTCCGGTTCGCGTGGTATTCACTCCCCGCGCGTGGACGCTGGGTGTTTACTTCGGTCTGATTAACGGCGGTTACGCCAGCCTGATTGCCTGGTTACCCGCTTTCTATATTGAGATTGGTGCCAGCGCGCAGTACAGCGGTTCCTTACTGGCATTGATGACGCTTGGGCAAGCCGCAGGAGCTTTGCTGATGCCTGCTATGGCTCGCCATCAGGATCGGCGCAAACTGTTAATGCTGGCGCTGGTGTTACAACTGGTGGGGTTCTGCGGCTTTATCTGGCTGCCGATGCAATTGCCGGTATTGTGGGCGATGGTGTGTGGGTTAGGTCTGGGCGGCGCGTTTCCGCTCTGTTTGCTGCTGGCGCTCGATCACTCTGTGCAACCGGCTATTGCTGGCAAGCTGGTGGCGTTTATGCAGGGAATCGGTTTTATCATCGCCGGGCTTGCCCCGTGGTTTTCTGGCGTGCTGCGTAGTATCAGCGGCAATTACCTGATGGACTGGGCATTTCATGCGCTGTGCGTCGTTGGGCTGATGATCATAACCCTGCGTTTTGCACCAGTACGTTTTCCGCAGCTGTGGGTCAAAGAGGCATGA", - "dna_sequence_length": 1155, - "functions": [ - "putative cyanate transporter" - ], - "id": "CDS_338", - "location": [ - [ - "NC_000913", - 359992, - "+", - 1155 - ] - ], - "md5": "e601ba6224c6c3f57a4e8553a337f854", - "parent_gene": "", - "protein_md5": "a42e40018f599ba50d0fb8b46aa21621", - "protein_translation": "MLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSHKTTTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPMQLPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPVRFPQLWVKEA", - "protein_translation_length": 384, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945674" - ], - [ - "gene_synonym", - "lacA" - ], - [ - "gene_synonym", - "b0342" - ], - [ - "gene_synonym", - "ECK0339" - ], - [ - "gene_synonym", - "ASAP:ABE-0001177" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07464" - ], - [ - "gene_synonym", - "NP_414876.1" - ], - [ - "gene_synonym", - "JW0333" - ], - [ - "gene_synonym", - "GI:16128327" - ], - [ - "gene_synonym", - "EcoGene:EG10524" - ] - ], - "dna_sequence": "TTGAACATGCCAATGACCGAAAGAATAAGAGCAGGCAAGCTATTTACCGATATGTGCGAAGGCTTACCGGAAAAAAGACTTCGTGGGAAAACGTTAATGTATGAGTTTAATCACTCGCATCCATCAGAAGTTGAAAAAAGAGAAAGCCTGATTAAAGAAATGTTTGCCACGGTAGGGGAAAACGCCTGGGTAGAACCGCCTGTCTATTTCTCTTACGGTTCCAACATCCATATAGGCCGCAATTTTTATGCAAATTTCAATTTAACCATTGTCGATGACTACACGGTAACAATCGGTGATAACGTACTGATTGCACCCAACGTTACTCTTTCCGTTACGGGACACCCTGTACACCATGAATTGAGAAAAAACGGCGAGATGTACTCTTTTCCGATAACGATTGGCAATAACGTCTGGATCGGAAGTCATGTGGTTATTAATCCAGGCGTCACCATCGGGGATAATTCTGTTATTGGCGCGGGTAGTATCGTCACAAAAGACATTCCACCAAACGTCGTGGCGGCTGGCGTTCCTTGTCGGGTTATTCGCGAAATAAACGACCGGGATAAGCACTATTATTTCAAAGATTATAAAGTTGAATCGTCAGTTTAA", - "dna_sequence_length": 612, - "functions": [ - "thiogalactoside acetyltransferase" - ], - "id": "CDS_339", - "location": [ - [ - "NC_000913", - 361860, - "-", - 612 - ] - ], - "md5": "a3cc2cde2e4f55ddfe1d705f49823640", - "parent_gene": "", - "protein_md5": "e69827668fe7dbce00e651f828d1d5c7", - "protein_translation": "MNMPMTERIRAGKLFTDMCEGLPEKRLRGKTLMYEFNHSHPSEVEKRESLIKEMFATVGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREINDRDKHYYFKDYKVESSV", - "protein_translation_length": 203, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:949083" - ], - [ - "gene_synonym", - "NP_414877.1" - ], - [ - "gene_synonym", - "b0343" - ], - [ - "gene_synonym", - "EcoGene:EG10526" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02920" - ], - [ - "gene_synonym", - "GI:16128328" - ], - [ - "gene_synonym", - "lacY" - ], - [ - "gene_synonym", - "ASAP:ABE-0001181" - ], - [ - "gene_synonym", - "JW0334" - ], - [ - "gene_synonym", - "ECK0340" - ] - ], - "dna_sequence": "ATGTACTATTTAAAAAACACAAACTTTTGGATGTTCGGTTTATTCTTTTTCTTTTACTTTTTTATCATGGGAGCCTACTTCCCGTTTTTCCCGATTTGGCTACATGACATCAACCATATCAGCAAAAGTGATACGGGTATTATTTTTGCCGCTATTTCTCTGTTCTCGCTATTATTCCAACCGCTGTTTGGTCTGCTTTCTGACAAACTCGGGCTGCGCAAATACCTGCTGTGGATTATTACCGGCATGTTAGTGATGTTTGCGCCGTTCTTTATTTTTATCTTCGGGCCACTGTTACAATACAACATTTTAGTAGGATCGATTGTTGGTGGTATTTATCTAGGCTTTTGTTTTAACGCCGGTGCGCCAGCAGTAGAGGCATTTATTGAGAAAGTCAGCCGTCGCAGTAATTTCGAATTTGGTCGCGCGCGGATGTTTGGCTGTGTTGGCTGGGCGCTGTGTGCCTCGATTGTCGGCATCATGTTCACCATCAATAATCAGTTTGTTTTCTGGCTGGGCTCTGGCTGTGCACTCATCCTCGCCGTTTTACTCTTTTTCGCCAAAACGGATGCGCCCTCTTCTGCCACGGTTGCCAATGCGGTAGGTGCCAACCATTCGGCATTTAGCCTTAAGCTGGCACTGGAACTGTTCAGACAGCCAAAACTGTGGTTTTTGTCACTGTATGTTATTGGCGTTTCCTGCACCTACGATGTTTTTGACCAACAGTTTGCTAATTTCTTTACTTCGTTCTTTGCTACCGGTGAACAGGGTACGCGGGTATTTGGCTACGTAACGACAATGGGCGAATTACTTAACGCCTCGATTATGTTCTTTGCGCCACTGATCATTAATCGCATCGGTGGGAAAAACGCCCTGCTGCTGGCTGGCACTATTATGTCTGTACGTATTATTGGCTCATCGTTCGCCACCTCAGCGCTGGAAGTGGTTATTCTGAAAACGCTGCATATGTTTGAAGTACCGTTCCTGCTGGTGGGCTGCTTTAAATATATTACCAGCCAGTTTGAAGTGCGTTTTTCAGCGACGATTTATCTGGTCTGTTTCTGCTTCTTTAAGCAACTGGCGATGATTTTTATGTCTGTACTGGCGGGCAATATGTATGAAAGCATCGGTTTCCAGGGCGCTTATCTGGTGCTGGGTCTGGTGGCGCTGGGCTTCACCTTAATTTCCGTGTTCACGCTTAGCGGCCCCGGCCCGCTTTCCCTGCTGCGTCGTCAGGTGAATGAAGTCGCTTAA", - "dna_sequence_length": 1254, - "functions": [ - "lactose permease" - ], - "id": "CDS_340", - "location": [ - [ - "NC_000913", - 363179, - "-", - 1254 - ] - ], - "md5": "3370705655f849d924ba349c462bf4e4", - "parent_gene": "", - "protein_md5": "49f5aab847431e5b9d173eb0199e3347", - "protein_translation": "MYYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALCASIVGIMFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRRQVNEVA", - "protein_translation_length": 417, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414878.1" - ], - [ - "gene_synonym", - "b0344" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00722" - ], - [ - "gene_synonym", - "EcoGene:EG10527" - ], - [ - "gene_synonym", - "GeneID:945006" - ], - [ - "gene_synonym", - "GI:16128329" - ], - [ - "gene_synonym", - "lacZ" - ], - [ - "gene_synonym", - "JW0335" - ], - [ - "gene_synonym", - "ASAP:ABE-0001183" - ], - [ - "gene_synonym", - "ECK0341" - ] - ], - "dna_sequence": "ATGACCATGATTACGGATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCCAACAGTTGCGCAGCCTGAATGGCGAATGGCGCTTTGCCTGGTTTCCGGCACCAGAAGCGGTGCCGGAAAGCTGGCTGGAGTGCGATCTTCCTGAGGCCGATACTGTCGTCGTCCCCTCAAACTGGCAGATGCACGGTTACGATGCGCCCATCTACACCAACGTGACCTATCCCATTACGGTCAATCCGCCGTTTGTTCCCACGGAGAATCCGACGGGTTGTTACTCGCTCACATTTAATGTTGATGAAAGCTGGCTACAGGAAGGCCAGACGCGAATTATTTTTGATGGCGTTAACTCGGCGTTTCATCTGTGGTGCAACGGGCGCTGGGTCGGTTACGGCCAGGACAGTCGTTTGCCGTCTGAATTTGACCTGAGCGCATTTTTACGCGCCGGAGAAAACCGCCTCGCGGTGATGGTGCTGCGCTGGAGTGACGGCAGTTATCTGGAAGATCAGGATATGTGGCGGATGAGCGGCATTTTCCGTGACGTCTCGTTGCTGCATAAACCGACTACACAAATCAGCGATTTCCATGTTGCCACTCGCTTTAATGATGATTTCAGCCGCGCTGTACTGGAGGCTGAAGTTCAGATGTGCGGCGAGTTGCGTGACTACCTACGGGTAACAGTTTCTTTATGGCAGGGTGAAACGCAGGTCGCCAGCGGCACCGCGCCTTTCGGCGGTGAAATTATCGATGAGCGTGGTGGTTATGCCGATCGCGTCACACTACGTCTGAACGTCGAAAACCCGAAACTGTGGAGCGCCGAAATCCCGAATCTCTATCGTGCGGTGGTTGAACTGCACACCGCCGACGGCACGCTGATTGAAGCAGAAGCCTGCGATGTCGGTTTCCGCGAGGTGCGGATTGAAAATGGTCTGCTGCTGCTGAACGGCAAGCCGTTGCTGATTCGAGGCGTTAACCGTCACGAGCATCATCCTCTGCATGGTCAGGTCATGGATGAGCAGACGATGGTGCAGGATATCCTGCTGATGAAGCAGAACAACTTTAACGCCGTGCGCTGTTCGCATTATCCGAACCATCCGCTGTGGTACACGCTGTGCGACCGCTACGGCCTGTATGTGGTGGATGAAGCCAATATTGAAACCCACGGCATGGTGCCAATGAATCGTCTGACCGATGATCCGCGCTGGCTACCGGCGATGAGCGAACGCGTAACGCGAATGGTGCAGCGCGATCGTAATCACCCGAGTGTGATCATCTGGTCGCTGGGGAATGAATCAGGCCACGGCGCTAATCACGACGCGCTGTATCGCTGGATCAAATCTGTCGATCCTTCCCGCCCGGTGCAGTATGAAGGCGGCGGAGCCGACACCACGGCCACCGATATTATTTGCCCGATGTACGCGCGCGTGGATGAAGACCAGCCCTTCCCGGCTGTGCCGAAATGGTCCATCAAAAAATGGCTTTCGCTACCTGGAGAGACGCGCCCGCTGATCCTTTGCGAATACGCCCACGCGATGGGTAACAGTCTTGGCGGTTTCGCTAAATACTGGCAGGCGTTTCGTCAGTATCCCCGTTTACAGGGCGGCTTCGTCTGGGACTGGGTGGATCAGTCGCTGATTAAATATGATGAAAACGGCAACCCGTGGTCGGCTTACGGCGGTGATTTTGGCGATACGCCGAACGATCGCCAGTTCTGTATGAACGGTCTGGTCTTTGCCGACCGCACGCCGCATCCAGCGCTGACGGAAGCAAAACACCAGCAGCAGTTTTTCCAGTTCCGTTTATCCGGGCAAACCATCGAAGTGACCAGCGAATACCTGTTCCGTCATAGCGATAACGAGCTCCTGCACTGGATGGTGGCGCTGGATGGTAAGCCGCTGGCAAGCGGTGAAGTGCCTCTGGATGTCGCTCCACAAGGTAAACAGTTGATTGAACTGCCTGAACTACCGCAGCCGGAGAGCGCCGGGCAACTCTGGCTCACAGTACGCGTAGTGCAACCGAACGCGACCGCATGGTCAGAAGCCGGGCACATCAGCGCCTGGCAGCAGTGGCGTCTGGCGGAAAACCTCAGTGTGACGCTCCCCGCCGCGTCCCACGCCATCCCGCATCTGACCACCAGCGAAATGGATTTTTGCATCGAGCTGGGTAATAAGCGTTGGCAATTTAACCGCCAGTCAGGCTTTCTTTCACAGATGTGGATTGGCGATAAAAAACAACTGCTGACGCCGCTGCGCGATCAGTTCACCCGTGCACCGCTGGATAACGACATTGGCGTAAGTGAAGCGACCCGCATTGACCCTAACGCCTGGGTCGAACGCTGGAAGGCGGCGGGCCATTACCAGGCCGAAGCAGCGTTGTTGCAGTGCACGGCAGATACACTTGCTGATGCGGTGCTGATTACGACCGCTCACGCGTGGCAGCATCAGGGGAAAACCTTATTTATCAGCCGGAAAACCTACCGGATTGATGGTAGTGGTCAAATGGCGATTACCGTTGATGTTGAAGTGGCGAGCGATACACCGCATCCGGCGCGGATTGGCCTGAACTGCCAGCTGGCGCAGGTAGCAGAGCGGGTAAACTGGCTCGGATTAGGGCCGCAAGAAAACTATCCCGACCGCCTTACTGCCGCCTGTTTTGACCGCTGGGATCTGCCATTGTCAGACATGTATACCCCGTACGTCTTCCCGAGCGAAAACGGTCTGCGCTGCGGGACGCGCGAATTGAATTATGGCCCACACCAGTGGCGCGGCGACTTCCAGTTCAACATCAGCCGCTACAGTCAACAGCAACTGATGGAAACCAGCCATCGCCATCTGCTGCACGCGGAAGAAGGCACATGGCTGAATATCGACGGTTTCCATATGGGGATTGGTGGCGACGACTCCTGGAGCCCGTCAGTATCGGCGGAATTCCAGCTGAGCGCCGGTCGCTACCATTACCAGTTGGTCTGGTGTCAAAAATAA", - "dna_sequence_length": 3075, - "functions": [ - "beta-D-galactosidase" - ], - "id": "CDS_341", - "location": [ - [ - "NC_000913", - 366305, - "-", - 3075 - ] - ], - "md5": "1852d4b74ebd175d16835f2ec404e67e", - "parent_gene": "", - "protein_md5": "61d924523cd4bd0dbab1985e54f1f401", - "protein_translation": "MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK", - "protein_translation_length": 1024, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0345" - ], - [ - "gene_synonym", - "NP_414879.3" - ], - [ - "gene_synonym", - "lacI" - ], - [ - "gene_synonym", - "EcoGene:EG10525" - ], - [ - "gene_synonym", - "GeneID:945007" - ], - [ - "gene_synonym", - "ASAP:ABE-0001189" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03023" - ], - [ - "gene_synonym", - "JW0336" - ], - [ - "gene_synonym", - "ECK0342" - ], - [ - "gene_synonym", - "GI:49176012" - ] - ], - "dna_sequence": "GTGAAACCAGTAACGTTATACGATGTCGCAGAGTATGCCGGTGTCTCTTATCAGACCGTTTCCCGCGTGGTGAACCAGGCCAGCCACGTTTCTGCGAAAACGCGGGAAAAAGTGGAAGCGGCGATGGCGGAGCTGAATTACATTCCCAACCGCGTGGCACAACAACTGGCGGGCAAACAGTCGTTGCTGATTGGCGTTGCCACCTCCAGTCTGGCCCTGCACGCGCCGTCGCAAATTGTCGCGGCGATTAAATCTCGCGCCGATCAACTGGGTGCCAGCGTGGTGGTGTCGATGGTAGAACGAAGCGGCGTCGAAGCCTGTAAAGCGGCGGTGCACAATCTTCTCGCGCAACGCGTCAGTGGGCTGATCATTAACTATCCGCTGGATGACCAGGATGCCATTGCTGTGGAAGCTGCCTGCACTAATGTTCCGGCGTTATTTCTTGATGTCTCTGACCAGACACCCATCAACAGTATTATTTTCTCCCATGAAGACGGTACGCGACTGGGCGTGGAGCATCTGGTCGCATTGGGTCACCAGCAAATCGCGCTGTTAGCGGGCCCATTAAGTTCTGTCTCGGCGCGTCTGCGTCTGGCTGGCTGGCATAAATATCTCACTCGCAATCAAATTCAGCCGATAGCGGAACGGGAAGGCGACTGGAGTGCCATGTCCGGTTTTCAACAAACCATGCAAATGCTGAATGAGGGCATCGTTCCCACTGCGATGCTGGTTGCCAACGATCAGATGGCGCTGGGCGCAATGCGCGCCATTACCGAGTCCGGGCTGCGCGTTGGTGCGGATATCTCGGTAGTGGGATACGACGATACCGAAGACAGCTCATGTTATATCCCGCCGTTAACCACCATCAAACAGGATTTTCGCCTGCTGGGGCAAACCAGCGTGGACCGCTTGCTGCAACTCTCTCAGGGCCAGGCGGTGAAGGGCAATCAGCTGTTGCCCGTCTCACTGGTGAAAAGAAAAACCACCCTGGCGCCCAATACGCAAACCGCCTCTCCCCGCGCGTTGGCCGATTCATTAATGCAGCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGA", - "dna_sequence_length": 1083, - "functions": [ - "lactose-inducible lac operon transcriptional repressor" - ], - "id": "CDS_342", - "location": [ - [ - "NC_000913", - 367510, - "-", - 1083 - ] - ], - "md5": "570baece468ba4bca65537e88a368dcd", - "parent_gene": "", - "protein_md5": "228e7a41278dfe231a49f0de7c32ff11", - "protein_translation": "MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLESGQ", - "protein_translation_length": 360, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001191" - ], - [ - "gene_synonym", - "mhpR" - ], - [ - "gene_synonym", - "GeneID:945938" - ], - [ - "gene_synonym", - "b0346" - ], - [ - "gene_synonym", - "GI:145698223" - ], - [ - "gene_synonym", - "EcoGene:EG20276" - ], - [ - "gene_synonym", - "NP_414880.2" - ], - [ - "gene_synonym", - "ECK0343" - ], - [ - "gene_synonym", - "JW0337" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77569" - ] - ], - "dna_sequence": "ATGCAGAACAATGAGCAGACGGAATACAAAACCGTGCGCGGCTTAACCCGCGGTCTAATGTTATTAAATATGTTAAATAAACTTGATGGCGGTGCCAGCGTCGGGCTGCTGGCGGAACTCAGCGGCCTGCATCGCACCACTGTGCGGCGACTGCTGGAGACGCTGCAGGAAGAGGGATATGTCCGCCGTAGCCCCTCCGATGATAGTTTTCGACTGACCATCAAAGTGCGGCAATTAAGCGAAGGATTTCGTGACGAACAGTGGATTTCTGCACTGGCGGCCCCACTGCTGGGCGATCTGTTGCGCGAAGTGGTATGGCCGACAGATGTGTCCACGCTGGATGTTGATGCAATGGTGGTACGCGAAACCACTCACCGTTTCAGCCGCTTATCCTTTCACCGGGCAATGGTCGGGCGACGTTTGCCGCTTCTGAAAACCGCCTCGGGCCTGACCTGGCTGGCCTTTTGCCCGGAACAAGACCGCAAGGAATTAATCGAAATGTTAGCCTCCCGCCCCGGTGATGACTATCAACTGGCACGGGAACCGTTAAAGCTGGAAGCCATTCTGGCGCGCGCGCGCAAAGAGGGTTACGGACAGAACTACCGCGGCTGGGATCAGGAGGAGAAGATCGCCTCTATCGCCGTACCGCTGCGCAGTGAACAACGGGTGATTGGCTGTCTGAATCTGGTGTATATGGCGAGCGCAATGACCATTGAACAGGCAGCGGAAAAGCATCTTCCGGCGCTACAACGGGTAGCAAAACAGATCGAAGAAGGGGTTGAATCGCAGGCTATTCTGGTGGCCGGAAGGCGAAGCGGCATGCATTTACGTTGA", - "dna_sequence_length": 834, - "functions": [ - "mhp operon transcriptional activator" - ], - "id": "CDS_343", - "location": [ - [ - "NC_000913", - 368420, - "-", - 834 - ] - ], - "md5": "784ae742cb0f575be5bd3c22673458b5", - "parent_gene": "", - "protein_md5": "62040962c3fe17fc1c7f7539ddf2f4d3", - "protein_translation": "MQNNEQTEYKTVRGLTRGLMLLNMLNKLDGGASVGLLAELSGLHRTTVRRLLETLQEEGYVRRSPSDDSFRLTIKVRQLSEGFRDEQWISALAAPLLGDLLREVVWPTDVSTLDVDAMVVRETTHRFSRLSFHRAMVGRRLPLLKTASGLTWLAFCPEQDRKELIEMLASRPGDDYQLAREPLKLEAILARARKEGYGQNYRGWDQEEKIASIAVPLRSEQRVIGCLNLVYMASAMTIEQAAEKHLPALQRVAKQIEEGVESQAILVAGRRSGMHLR", - "protein_translation_length": 277, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77397" - ], - [ - "gene_synonym", - "NP_414881.1" - ], - [ - "gene_synonym", - "b0347" - ], - [ - "gene_synonym", - "ASAP:ABE-0001196" - ], - [ - "gene_synonym", - "GeneID:945197" - ], - [ - "gene_synonym", - "JW0338" - ], - [ - "gene_synonym", - "mhpA" - ], - [ - "gene_synonym", - "EcoGene:EG20273" - ], - [ - "gene_synonym", - "ECK0344" - ], - [ - "gene_synonym", - "GI:16128332" - ] - ], - "dna_sequence": "ATGGCAATACAACACCCTGACATCCAGCCTGCTGTTAACCATAGCGTTCAGGTGGCGATCGCTGGTGCCGGCCCGGTTGGGCTGATGATGGCGAACTATCTCGGCCAGATGGGCATTGACGTGCTGGTGGTGGAGAAACTCGATAAGTTGATCGACTACCCGCGTGCGATTGGTATTGATGACGAGGCGCTGCGCACCATGCAGTCGGTCGGCCTGGTCGATGATGTTCTGCCGCACACTACGCCGTGGCACGCGATGCGTTTTCTCACCCCGAAAGGCCGCTGTTTTGCTGATATTCAGCCAATGACCGATGAATTTGGCTGGCCGCGCCGTAACGCCTTTATTCAGCCGCAGGTCGATGCGGTGATGCTGGAAGGGGTGTCGCGTTTTCCGAATGTGCGCTGCTTGTTTTCCCGCGAGCTGGAGGCCTTCAGTCAGCAAGATGACGAAGTGACCTTGCACCTGAAAACGGCAGAAGGGCAGCGGGAAATAGTCAAAGCCCAGTGGCTGGTAGCCTGTGACGGTGGAGCAAGTTTTGTCCGTCGCACTCTGAATGTGCCGTTTGAAGGTAAAACTGCGCCAAATCAGTGGATTGTGGTAGATATCGCCAACGATCCGTTAAGTACGCCGCATATCTATTTGTGTTGCGATCCGGTGCGCCCGTATGTTTCTGCCGCGCTGCCTCATGCGGTACGTCGCTTTGAATTTATGGTGATGCCGGGAGAAACCGAAGAGCAGCTGCGTGAGCCGCAAAATATGCGCAAGCTGTTAAGCAAAGTGCTGCCTAATCCGGACAATGTTGAATTGATTCGCCAGCGTGTCTACACCCACAACGCGCGACTGGCGCAACGTTTCCGTATTGATCGCGTACTGCTGGCGGGCGATGCCGCGCACATCATGCCGGTATGGCAGGGGCAGGGCTATAACAGTGGTATGCGCGACGCCTTTAACCTCGCATGGAAACTGGCGTTGGTTATCCAGGGGAAAGCCCGCGATGCGCTGCTCGATACCTATCAACAAGAACGTCGCGATCACGCCAAAGCGATGATTGACCTGTCCGTGACGGCGGGCAACGTGCTGGCTCCGCCGAAACGCTGGCAGGGTACGTTACGTGACGGCGTTTCCTGGCTGTTGAATTATCTGCCGCCAGTAAAACGCTACTTCCTCGAAATGCGCTTCAAGCCGATGCCGCAATATTACGGCGGTGCGCTGATGCGTGAGGGCGAAGCGAAGCACTCTCCGGTCGGCAAGATGTTTATTCAGCCGAAAGTCACGCTGGAAAACGGCGACGTGACGCTGCTCGATAACGCGATCGGCGCGAACTTCGCGGTAATTGGCTGGGGATGCAATCCACTGTGGGGGATGAGCGACGAGCAAATCCAGCAGTGGCGCGCGTTGGGCACACGCTTCATTCAGGTGGTGCCGGAAGTGCAAATTCATACCGCACAGGATAACCACGACGGCGTACTACGCGTGGGCGATACGCAAGGTCGCCTGCGTAGCTGGTTCGCGCAACACAATGCTTCGCTGGTGGTGATGCGCCCGGATCGCTTTGTTGCCGCCACCGCCATTCCGCAAACCCTGGGCAAGACCCTGAATAAACTGGCGTCGGTGATGACGCTGACCCGCCCTGATGCCGACGTTTCTGTCGAAAAGGTAGCCTGA", - "dna_sequence_length": 1665, - "functions": [ - "3-(3-hydroxyphenyl)propionate hydroxylase" - ], - "id": "CDS_344", - "location": [ - [ - "NC_000913", - 368611, - "+", - 1665 - ] - ], - "md5": "16f8a15c493e01fa0cb99088108da645", - "parent_gene": "", - "protein_md5": "066f75165e952fb244545cc08873bf22", - "protein_translation": "MAIQHPDIQPAVNHSVQVAIAGAGPVGLMMANYLGQMGIDVLVVEKLDKLIDYPRAIGIDDEALRTMQSVGLVDDVLPHTTPWHAMRFLTPKGRCFADIQPMTDEFGWPRRNAFIQPQVDAVMLEGVSRFPNVRCLFSRELEAFSQQDDEVTLHLKTAEGQREIVKAQWLVACDGGASFVRRTLNVPFEGKTAPNQWIVVDIANDPLSTPHIYLCCDPVRPYVSAALPHAVRRFEFMVMPGETEEQLREPQNMRKLLSKVLPNPDNVELIRQRVYTHNARLAQRFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFNLAWKLALVIQGKARDALLDTYQQERRDHAKAMIDLSVTAGNVLAPPKRWQGTLRDGVSWLLNYLPPVKRYFLEMRFKPMPQYYGGALMREGEAKHSPVGKMFIQPKVTLENGDVTLLDNAIGANFAVIGWGCNPLWGMSDEQIQQWRALGTRFIQVVPEVQIHTAQDNHDGVLRVGDTQGRLRSWFAQHNASLVVMRPDRFVAATAIPQTLGKTLNKLASVMTLTRPDADVSVEKVA", - "protein_translation_length": 554, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945047" - ], - [ - "gene_synonym", - "b0348" - ], - [ - "gene_synonym", - "ASAP:ABE-0001198" - ], - [ - "gene_synonym", - "NP_414882.1" - ], - [ - "gene_synonym", - "JW0339" - ], - [ - "gene_synonym", - "mhpB" - ], - [ - "gene_synonym", - "EcoGene:EG20274" - ], - [ - "gene_synonym", - "ECK0345" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABR9" - ], - [ - "gene_synonym", - "GI:16128333" - ] - ], - "dna_sequence": "ATGCACGCTTATCTTCACTGTCTTTCCCACTCGCCGCTGGTGGGGTATGTCGACCCGGCGCAAGAGGTGCTCGATGAGGTCAATGGCGTGATTGCCAGCGCCCGCGAGCGTATTGCGGCATTCTCCCCTGAACTGGTGGTGCTGTTTGCGCCAGATCACTACAACGGCTTTTTCTATGACGTGATGCCACCGTTCTGTTTAGGCGTTGGAGCGACGGCAATTGGTGATTTCGGCAGTGCGGCAGGAGAGCTGCCCGTGCCTGTGGAGCTGGCGGAGGCCTGTGCGCATGCCGTCATGAAGAGCGGGATCGATCTTGCCGTTTCTTACTGTATGCAGGTGGACCACGGGTTCGCCCAGCCGCTGGAGTTCCTGCTCGGTGGGCTGGATAAGGTGCCAGTTCTGCCTGTGTTCATCAACGGTGTCGCCACGCCGCTGCCCGGTTTCCAGCGTACCCGCATGTTGGGTGAAGCCATTGGACGTTTCACCAGCACTCTCAATAAACGCGTGCTGTTCCTGGGTTCCGGTGGGCTTTCCCATCAGCCGCCGGTGCCCGAACTGGCGAAAGCCGATGCCCATATGCGCGACCGTCTGTTGGGGAGCGGGAAAGATTTACCCGCCAGTGAGCGCGAATTGCGTCAGCAACGGGTGATTAGCGCCGCTGAGAAGTTTGTTGAGGATCAGAGAACGCTGCATCCGCTCAACCCGATTTGGGATAACCAGTTCATGACTTTGCTGGAGCAGGGACGCATACAGGAACTGGATGCCGTCAGTAACGAAGAGCTTTCCGCCATTGCCGGAAAGTCGACACATGAAATCAAAACCTGGGTCGCCGCTTTTGCCGCTATTTCTGCGTTTGGCAACTGGCGTAGCGAAGGGCGTTATTACCGCCCAATCCCGGAGTGGATTGCCGGATTTGGCTCGTTAAGCGCCAGAACAGAGAACTGA", - "dna_sequence_length": 945, - "functions": [ - "2,3-dihydroxyphenylpropionate 1,2-dioxygenase" - ], - "id": "CDS_345", - "location": [ - [ - "NC_000913", - 370277, - "+", - 945 - ] - ], - "md5": "f4870f2d857cf429362d1d8c4fe37bca", - "parent_gene": "", - "protein_md5": "2932d3b4e9fdac8bc4bfe81ba6c920bd", - "protein_translation": "MHAYLHCLSHSPLVGYVDPAQEVLDEVNGVIASARERIAAFSPELVVLFAPDHYNGFFYDVMPPFCLGVGATAIGDFGSAAGELPVPVELAEACAHAVMKSGIDLAVSYCMQVDHGFAQPLEFLLGGLDKVPVLPVFINGVATPLPGFQRTRMLGEAIGRFTSTLNKRVLFLGSGGLSHQPPVPELAKADAHMRDRLLGSGKDLPASERELRQQRVISAAEKFVEDQRTLHPLNPIWDNQFMTLLEQGRIQELDAVSNEELSAIAGKSTHEIKTWVAAFAAISAFGNWRSEGRYYRPIPEWIAGFGSLSARTEN", - "protein_translation_length": 314, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0340" - ], - [ - "gene_synonym", - "GI:459201369" - ], - [ - "gene_synonym", - "b0349" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77044" - ], - [ - "gene_synonym", - "mhpC" - ], - [ - "gene_synonym", - "GeneID:944954" - ], - [ - "gene_synonym", - "NP_414883.5" - ], - [ - "gene_synonym", - "EcoGene:EG20275" - ], - [ - "gene_synonym", - "ECK0346" - ], - [ - "gene_synonym", - "ASAP:ABE-0001201" - ] - ], - "dna_sequence": "ATGAGTTATCAGCCACAAACCGAAGCCGCCACCAGCCGTTTTCTGAATGTAGAAGAAGCGGGTAAAACGCTGCGCATCCATTTTAATGACTGCGGACAAGGCGACGAAACCGTTGTCCTGCTGCATGGTTCCGGCCCGGGTGCTACTGGCTGGGCGAACTTCAGCCGCAATATCGATCCGCTGGTAGAGGCGGGCTATCGGGTGATCCTGCTGGATTGTCCGGGTTGGGGCAAGAGCGATTCGGTCGTTAATAGTGGTTCGCGATCGGATCTTAATGCACGAATCCTGAAAAGCGTGGTGGATCAACTGGATATCGCCAAAATCCACCTGCTGGGCAACTCGATGGGGGGCCATAGTTCTGTGGCGTTCACCCTTAAATGGCCGGAGCGCGTCGGCAAACTGGTGCTGATGGGCGGCGGTACGGGCGGCATGAGTTTGTTTACGCCGATGCCAACCGAAGGTATTAAGCGACTGAATCAGCTTTATCGTCAGCCGACTATCGAAAACCTGAAGCTGATGATGGATATCTTCGTTTTTGATACCAGCGATTTGACCGACGCCCTGTTTGAAGCGCGCCTGAATAATATGCTGTCGCGCCGCGATCACCTGGAAAACTTCGTTAAGAGCCTGGAAGCTAATCCGAAACAGTTCCCGGATTTTGGCCCACGTCTGGCGGAAATCAAAGCGCAAACCCTGATTGTCTGGGGGCGCAACGACCGCTTTGTGCCGATGGATGCGGGTCTGCGTCTGCTGTCCGGCATTGCCGGTTCTGAACTGCATATCTTCCGCGACTGTGGTCACTGGGCGCAGTGGGAACATGCCGACGCTTTCAATCAACTGGTGCTGAATTTCCTCGCACGCCCTTAA", - "dna_sequence_length": 867, - "functions": [ - "2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase" - ], - "id": "CDS_346", - "location": [ - [ - "NC_000913", - 371239, - "+", - 867 - ] - ], - "md5": "5ca398faf3ca0051fbaf1278e4656765", - "parent_gene": "", - "protein_md5": "5f8f757095f99040f2af355c661c350a", - "protein_translation": "MSYQPQTEAATSRFLNVEEAGKTLRIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAGSELHIFRDCGHWAQWEHADAFNQLVLNFLARP", - "protein_translation_length": 288, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "mhpS" - ], - [ - "gene_synonym", - "NP_414884.2" - ], - [ - "gene_synonym", - "b0350" - ], - [ - "gene_synonym", - "ASAP:ABE-0001205" - ], - [ - "gene_synonym", - "GeneID:944768" - ], - [ - "gene_synonym", - "EcoGene:EG14274" - ], - [ - "gene_synonym", - "JW0341" - ], - [ - "gene_synonym", - "GI:90111116" - ], - [ - "gene_synonym", - "mhpD" - ], - [ - "gene_synonym", - "ECK0347" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77608" - ] - ], - "dna_sequence": "ATGACGAAGCATACTCTTGAGCAACTGGCGGCGGATTTACGCCGCGCCGCAGAGCAGGGCGAAGCGATTGCACCGCTGCGCGATCTGATTGGTATCGATAACGCTGAAGCGGCTTACGCCATTCAGCACATAAATGTGCAACATGACGTTGCGCAGGGGCGTCGCGTGGTAGGGCGTAAAGTGGGCCTGACACATCCGAAAGTGCAACAACAACTGGGCGTTGATCAACCGGATTTTGGGACGTTATTTGCCGACATGTGTTATGGCGATAACGAAATCATTCCTTTTTCCCGTGTTCTGCAACCCCGCATTGAAGCGGAGATCGCACTGGTGTTGAACCGCGATTTGCCCGCAACCGATATCACCTTCGACGAATTGTATAACGCCATTGAATGGGTACTTCCGGCGCTGGAAGTGGTGGGGAGCCGCATTCGCGACTGGTCGATTCAGTTTGTCGATACCGTGGCAGATAACGCCTCCTGTGGGGTGTATGTCATCGGCGGTCCGGCGCAACGTCCGGCGGGGTTAGACCTGAAAAACTGCGCCATGAAGATGACGCGTAATAACGAAGAGGTTTCTAGCGGGCGCGGCAGCGAATGCCTGGGACATCCGCTTAATGCGGCCGTCTGGCTGGCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGA", - "dna_sequence_length": 810, - "functions": [ - "2-keto-4-pentenoate hydratase" - ], - "id": "CDS_347", - "location": [ - [ - "NC_000913", - 372115, - "+", - 810 - ] - ], - "md5": "4521c523ab1522dae841ce7daf0c7e0a", - "parent_gene": "", - "protein_md5": "da10eaa6e06640558dea3773f0f7dd3c", - "protein_translation": "MTKHTLEQLAADLRRAAEQGEAIAPLRDLIGIDNAEAAYAIQHINVQHDVAQGRRVVGRKVGLTHPKVQQQLGVDQPDFGTLFADMCYGDNEIIPFSRVLQPRIEAEIALVLNRDLPATDITFDELYNAIEWVLPALEVVGSRIRDWSIQFVDTVADNASCGVYVIGGPAQRPAGLDLKNCAMKMTRNNEEVSSGRGSECLGHPLNAAVWLARKMASLGEPLRTGDIILTGALGPMVAVNAGDRFEAHIEGIGSVAATFSSAAPKGSLS", - "protein_translation_length": 269, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13625" - ], - [ - "gene_synonym", - "NP_414885.1" - ], - [ - "gene_synonym", - "b0351" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77580" - ], - [ - "gene_synonym", - "JW0342" - ], - [ - "gene_synonym", - "mhpF" - ], - [ - "gene_synonym", - "ECK0348" - ], - [ - "gene_synonym", - "GI:16128336" - ], - [ - "gene_synonym", - "ASAP:ABE-0001207" - ], - [ - "gene_synonym", - "GeneID:945008" - ] - ], - "dna_sequence": "ATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAATTTTGCGTCACGGTCAGCATCTGGAGATGGCGGTGATGGTTGGCATTGATCCTCAGTCCGACGGTCTGGCGCGCGCCAGACGTATGGGCGTCGCCACCACCCATGAAGGGGTGATCGGACTGATGAACATGCCTGAATTTGCTGATATCGACATTGTATTTGATGCGACCAGCGCCGGTGCTCATGTGAAAAACGATGCCGCTTTACGCGAAGCGAAACCGGATATTCGCTTAATTGACCTGACGCCTGCTGCCATCGGCCCTTACTGCGTGCCGGTGGTTAACCTCGAGGCGAACGTCGATCAACTGAACGTCAACATGGTCACCTGCGGCGGCCAGGCCACCATTCCAATGGTGGCGGCAGTTTCACGCGTGGCGCGTGTTCATTACGCCGAAATTATCGCTTCTATCGCCAGTAAATCTGCCGGACCTGGCACGCGTGCCAATATCGATGAATTTACGGAAACCACTTCCCGAGCCATTGAAGTGGTGGGCGGCGCGGCAAAAGGGAAGGCGATTATTGTGCTTAACCCAGCAGAGCCACCGTTGATGATGCGTGACACGGTGTATGTATTGAGCGACGAAGCTTCACAAGATGATATCGAAGCCTCAATCAATGAAATGGCTGAGGCGGTGCAGGCTTACGTACCGGGTTATCGCCTGAAACAGCGCGTGCAGTTTGAAGTTATCCCGCAGGATAAACCGGTCAATTTACCGGGCGTGGGGCAATTCTCCGGACTGAAAACAGCGGTCTGGCTGGAAGTCGAAGGCGCAGCGCATTATCTGCCTGCCTATGCGGGCAACCTCGACATTATGACTTCCAGTGCGCTGGCGACAGCGGAAAAAATGGCCCAGTCACTGGCGCGCAAGGCAGGAGAAGCGGCATGA", - "dna_sequence_length": 951, - "functions": [ - "acetaldehyde-CoA dehydrogenase II, NAD-binding" - ], - "id": "CDS_348", - "location": [ - [ - "NC_000913", - 372921, - "+", - 951 - ] - ], - "md5": "a64ea9612d6a4ee997b390aae12ec0b3", - "parent_gene": "", - "protein_md5": "2cfc807776cae4addcaafe7630a822e3", - "protein_translation": "MSKRKVAIIGSGNIGTDLMIKILRHGQHLEMAVMVGIDPQSDGLARARRMGVATTHEGVIGLMNMPEFADIDIVFDATSAGAHVKNDAALREAKPDIRLIDLTPAAIGPYCVPVVNLEANVDQLNVNMVTCGGQATIPMVAAVSRVARVHYAEIIASIASKSAGPGTRANIDEFTETTSRAIEVVGGAAKGKAIIVLNPAEPPLMMRDTVYVLSDEASQDDIEASINEMAEAVQAYVPGYRLKQRVQFEVIPQDKPVNLPGVGQFSGLKTAVWLEVEGAAHYLPAYAGNLDIMTSSALATAEKMAQSLARKAGEAA", - "protein_translation_length": 316, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "mhpE" - ], - [ - "gene_synonym", - "NP_414886.1" - ], - [ - "gene_synonym", - "GeneID:945012" - ], - [ - "gene_synonym", - "JW0343" - ], - [ - "gene_synonym", - "ASAP:ABE-0001209" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P51020" - ], - [ - "gene_synonym", - "ECK0349" - ], - [ - "gene_synonym", - "GI:16128337" - ], - [ - "gene_synonym", - "EcoGene:EG13292" - ], - [ - "gene_synonym", - "b0352" - ] - ], - "dna_sequence": "ATGAACGGTAAAAAACTTTATATCTCGGACGTCACATTGCGTGACGGTATGCACGCCATTCGTCATCAGTATTCGCTGGAAAACGTTCGCCAGATTGCCAAAGCACTGGACGATGCCCGCGTGGATTCGATTGAAGTGGCCCACGGCGACGGTTTGCAAGGTTCCAGCTTTAACTATGGTTTCGGCGCACATAGCGACCTTGAATGGATTGAAGCGGCGGCGGATGTGGTGAAGCACGCCAAAATCGCGACGTTGTTGCTGCCAGGAATCGGCACTATTCACGATCTGAAAAATGCCTGGCAGGCTGGCGCGCGGGTGGTTCGTGTGGCAACGCACTGTACCGAAGCTGATGTTTCCGCCCAGCATATTCAGTATGCCCGCGAGCTCGGAATGGACACCGTTGGTTTTCTGATGATGAGCCATATGACCACGCCGGAGAATCTCGCCAAGCAGGCAAAGCTGATGGAAGGCTACGGTGCGACCTGTATTTATGTGGTGGATTCTGGCGGTGCGATGAACATGAGCGATATCCGTGACCGTTTCCGCGCCCTGAAAGCAGAGCTGAAACCAGAAACGCAAACTGGCATGCACGCTCACCATAACCTGAGTCTTGGCGTGGCGAACTCTATCGCGGCGGTGGAAGAGGGCTGCGACCGAATCGACGCCAGCCTCGCGGGAATGGGCGCGGGCGCAGGTAACGCACCGCTGGAAGTGTTTATTGCCGCCGCGGATAAACTGGGCTGGCAGCATGGGACCGATCTCTATGCGTTAATGGATGCCGCCGACGACCTGGTGCGTCCGTTGCAGGATCGACCGGTACGAGTCGATCGCGAAACGCTGGCGCTGGGATACGCTGGTGTTTACTCGAGCTTCCTGCGTCACTGTGAAACGGCGGCGGCGCGTTATGGCTTAAGTGCGGTGGATATTCTCGTTGAGCTGGGCAAACGCCGGATGGTTGGCGGCCAGGAGGATATGATCGTTGACGTGGCGCTGGATCTGCGCAACAACAAATAA", - "dna_sequence_length": 1014, - "functions": [ - "4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase, class I" - ], - "id": "CDS_349", - "location": [ - [ - "NC_000913", - 373868, - "+", - 1014 - ] - ], - "md5": "d7620dfde64a231111445b05ad5132df", - "parent_gene": "", - "protein_md5": "0cecdc75cde2708ed60a5ea482fa9481", - "protein_translation": "MNGKKLYISDVTLRDGMHAIRHQYSLENVRQIAKALDDARVDSIEVAHGDGLQGSSFNYGFGAHSDLEWIEAAADVVKHAKIATLLLPGIGTIHDLKNAWQAGARVVRVATHCTEADVSAQHIQYARELGMDTVGFLMMSHMTTPENLAKQAKLMEGYGATCIYVVDSGGAMNMSDIRDRFRALKAELKPETQTGMHAHHNLSLGVANSIAAVEEGCDRIDASLAGMGAGAGNAPLEVFIAAADKLGWQHGTDLYALMDAADDLVRPLQDRPVRVDRETLALGYAGVYSSFLRHCETAAARYGLSAVDILVELGKRRMVGGQEDMIVDVALDLRNNK", - "protein_translation_length": 337, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0353" - ], - [ - "gene_synonym", - "GeneID:944997" - ], - [ - "gene_synonym", - "GI:90111117" - ], - [ - "gene_synonym", - "mhpT" - ], - [ - "gene_synonym", - "yaiK" - ], - [ - "gene_synonym", - "NP_414887.2" - ], - [ - "gene_synonym", - "EcoGene:EG13293" - ], - [ - "gene_synonym", - "ASAP:ABE-0001213" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77589" - ], - [ - "gene_synonym", - "ECK0350" - ], - [ - "gene_synonym", - "JW5046" - ] - ], - "dna_sequence": "ATGTCGACTCGTACCCCTTCATCATCTTCATCCCGCCTGATGCTGACCATCGGGCTTTGTTTTTTGGTCGCTCTGATGGAAGGGCTGGATCTTCAGGCGGCTGGCATTGCGGCGGGTGGCATCGCCCAGGCTTTCGCACTCGATAAAATGCAAATGGGCTGGATATTTAGCGCCGGAATACTCGGTTTGCTACCCGGCGCGTTGGTTGGCGGAATGCTGGCGGACCGTTATGGTCGCAAGCGCATTTTGATTGGCTCAGTTGCGCTGTTTGGTTTGTTCTCACTGGCAACGGCGATTGCCTGGGATTTCCCCTCACTGGTCTTTGCGCGGCTGATGACCGGTGTCGGGCTGGGGGCGGCGTTGCCGAATCTTATCGCCCTGACGTCTGAAGCCGCGGGTCCACGTTTTCGTGGGACGGCAGTGAGCCTGATGTATTGCGGTGTTCCCATTGGCGCGGCGCTGGCGGCGACACTGGGTTTCGCGGGGGCAAACTTAGCATGGCAAACGGTGTTTTGGGTAGGTGGTGTGGTGCCGTTGATTCTGGTGCCGCTATTAATGCGCTGGCTGCCGGAGTCGGCGGTTTTCGCTGGCGAAAAACAGTCTGCGCCACCACTGCGTGCCTTATTTGCGCCAGAAACGGCAACCGCGACGCTGCTGCTGTGGTTGTGTTATTTCTTCACTCTGCTGGTGGTCTACATGTTGATCAACTGGCTACCGCTACTTTTGGTGGAGCAAGGATTCCAGCCATCGCAGGCGGCAGGGGTGATGTTTGCCCTGCAAATGGGGGCGGCAAGCGGGACGTTAATGTTGGGCGCATTGATGGATAAGCTGCGTCCAGTAACCATGTCGCTACTGATTTATAGCGGCATGTTAGCTTCGCTGCTGGCGCTTGGAACGGTGTCGTCATTTAACGGTATGTTGCTGGCGGGATTTGTCGCGGGGTTGTTTGCGACAGGTGGGCAAAGCGTTTTGTATGCCCTGGCACCGTTGTTTTACAGTTCGCAGATCCGCGCAACAGGTGTGGGAACAGCCGTGGCGGTAGGGCGTCTGGGGGCTATGAGCGGTCCGTTACTGGCCGGGAAAATGCTGGCATTAGGCACTGGCACGGTCGGCGTAATGGCCGCTTCTGCACCGGGTATTCTTGTTGCTGGGTTGGCGGTGTTTATTTTGATGAGCCGGAGATCACGAATACAGCCGTGCGCCGATGCCTGA", 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"EcoGene:EG13294" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P51024" - ], - [ - "gene_synonym", - "JW0345" - ], - [ - "gene_synonym", - "ASAP:ABE-0001216" - ], - [ - "gene_synonym", - "ECK0351" - ], - [ - "gene_synonym", - "NP_414888.4" - ] - ], - "dna_sequence": "ATGGCAAAACTTACCTTACAAGAGCAGTTGCTCAAAGCAGGATTAGTCACCAGCAAAAAAGCGGCGAAGGTGGAGAGAACGGCGAAAAAATCGCGCGTTCAGGCGCGTGAAGCTCGGGCGGCGGTAGAAGAAAATAAAAAGGCACAGCTTGAGCGTGATAAACAGCTTAGCGAACAGCAAAAACAAGCGGCGTTGGCGAAAGAATATAAAGCTCAGGTGAAGCAGCTTATTGAAATGAACCGAATCACCATTGCCAATGGCGATATTGGTTTTAACTTCACTGACGGCAATCTGATTAAGAAGATTTTTGTCGATAAGCTCACACAGGCGCAGTTGATTAATGGTCGTCTGGCGATTGCCCGCTTGTTGGTCGATAACAATAGCGAAGGTGAATACGCCATTATTCCCGCCAGCGTTGCCGATAAAATTGCTCAGCGCGATGCCAGCAGTATAGTGTTGCACAGCGCGCTCAGCGCCGAAGAGCAGGATGAAGACGACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAA", - "dna_sequence_length": 540, - "functions": [ - "DUF2058 family protein" - ], - "id": "CDS_351", - "location": [ - [ - "NC_000913", - 376772, - "+", - 540 - ] - ], - "md5": "4cecc1653aa8a773efb55e881026f348", - "parent_gene": "", - "protein_md5": "bcbd4cdb0268ca8a2c022422865ad231", - "protein_translation": "MAKLTLQEQLLKAGLVTSKKAAKVERTAKKSRVQAREARAAVEENKKAQLERDKQLSEQQKQAALAKEYKAQVKQLIEMNRITIANGDIGFNFTDGNLIKKIFVDKLTQAQLINGRLAIARLLVDNNSEGEYAIIPASVADKIAQRDASSIVLHSALSAEEQDEDDPYADFKVPDDLMW", - "protein_translation_length": 179, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "frmB" - ], - [ - "gene_synonym", - "b0355" - ], - [ - "gene_synonym", - "GeneID:944991" - ], - [ - "gene_synonym", - "yaiM" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P51025" - ], - [ - "gene_synonym", - "EcoGene:EG13295" - ], - [ - "gene_synonym", - "ASAP:ABE-0001219" - ], - [ - "gene_synonym", - "JW0346" - ], - [ - "gene_synonym", - "GI:16128340" - ], - [ - "gene_synonym", - "NP_414889.1" - ], - [ - "gene_synonym", - "ECK0352" - ] - ], - "dna_sequence": "ATGGAACTCATTGAAAAACATGTCAGCTTTGGCGGCTGGCAAAATATGTATCGGCATTATTCCCAATCACTGAAATGTGAAATGAATGTCGGCGTCTATCTCCCACCAAAAGCCGCGAATGAAAAATTGCCGGTGCTGTACTGGCTTTCAGGCCTGACCTGCAACGAGCAGAATTTCATTACTAAATCGGGGATGCAGCGTTACGCGGCTGAGCACAACATTATTGTTGTTGCGCCGGACACCAGTCCGCGAGGCAGTCATGTCGCAGATGCTGACCGTTACGATCTCGGGCAAGGTGCCGGGTTTTACCTGAACGCGACGCAAGCGCCGTGGAATGAACATTACAAAATGTATGACTATATCCGCAACGAGCTGCCGGATTTAGTGATGCATCATTTTCCGGCAACGGCCAAAAAGTCTATCTCTGGTCATTCTATGGGCGGGCTGGGCGCGCTGGTGCTGGCGTTACGTAACCCAGATGAATATGTCAGCGTCTCGGCGTTTTCGCCCATTGTCTCCCCATCGCAAGTGCCGTGGGGACAGCAAGCCTTTGCTGCATATCTTGCTGAAAATAAAGATGCCTGGTTGGATTACGACCCGGTGAGTCTTATTTCACAAGGTCAACGCGTTGCGGAAATCATGGTTGATCAGGGGTTGAGTGATGATTTTTACGCAGAACAGCTGCGGACTCCAAATCTTGAAAAGATCTGCCAGGAGATGAATATCAAGACGTTAATCCGTTATCACGAGGGTTATGATCACAGCTATTATTTTGTCTCCAGTTTTATTGGCGAGCATATTGCCTACCACGCCAATAAACTGAATATGCGTTGA", - "dna_sequence_length": 834, - "functions": [ - "S-formylglutathione hydrolase" - ], - "id": "CDS_352", - "location": [ - [ - "NC_000913", - 378368, - "-", - 834 - ] - ], - "md5": "89395584e723e09413c7e86c00169bc4", - "parent_gene": "", - "protein_md5": "c905e1b4cfcc2dc8517c90d0ae8e241c", - "protein_translation": "MELIEKHVSFGGWQNMYRHYSQSLKCEMNVGVYLPPKAANEKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMHHFPATAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLAENKDAWLDYDPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTPNLEKICQEMNIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR", - "protein_translation_length": 277, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0356" - ], - [ - "gene_synonym", - "frmA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25437" - ], - [ - "gene_synonym", - "GeneID:944988" - ], - [ - "gene_synonym", - "NP_414890.1" - ], - [ - "gene_synonym", - "adhC" - ], - [ - "gene_synonym", - "ASAP:ABE-0001221" - ], - [ - "gene_synonym", - "JW0347" - ], - [ - "gene_synonym", - "GI:16128341" - ], - [ - "gene_synonym", - "EcoGene:EG50010" - ], - [ - "gene_synonym", - "ECK0353" - ] - ], - "dna_sequence": "ATGAAATCACGTGCTGCCGTTGCATTTGCTCCCGGTAAACCGCTGGAAATCGTTGAAATTGACGTTGCACCACCGAAAAAAGGTGAAGTGCTAATTAAAGTCACCCATACCGGCGTTTGCCATACCGACGCATTTACCCTCTCCGGCGATGACCCGGAAGGTGTATTCCCGGTGGTTCTCGGTCACGAAGGGGCCGGCGTTGTGGTTGAAGTCGGTGAAGGCGTAACCAGCGTCAAACCTGGCGACCATGTGATCCCGCTTTACACCGCGGAGTGCGGCGAGTGTGAGTTCTGTCGTTCTGGCAAAACTAACCTCTGTGTTGCGGTTCGCGAAACCCAGGGTAAAGGCCTGATGCCAGACGGCACCACCCGTTTTTCTTACAACGGGCAGCCGCTTTATCACTACATGGGGTGCTCTACATTCAGTGAATACACCGTAGTCGCGGAAGTGTCTCTGGCAAAAATTAATCCAGAAGCAAACCATGAACACGTCTGCCTGCTGGGCTGTGGCGTGACCACCGGTATTGGCGCGGTACACAACACAGCTAAAGTCCAGCCAGGTGATTCTGTTGCCGTGTTTGGTCTTGGCGCGATTGGTCTGGCAGTGGTTCAGGGCGCGCGTCAGGCGAAAGCGGGTCGGATTATCGCTATCGATACCAACCCGAAGAAATTCGATCTGGCGCGTCGCTTCGGTGCTACCGACTGCATTAACCCGAATGACTACGACAAACCGATAAAAGATGTCCTGTTGGATATCAACAAATGGGGTATCGACCATACCTTTGAATGCATCGGTAACGTCAACGTGATGCGTGCGGCGCTGGAAAGTGCGCACCGCGGCTGGGGTCAGTCGGTGATCATCGGGGTCGCGGTTGCCGGTCAGGAAATCTCCACCCGTCCATTCCAGTTGGTCACTGGTCGCGTATGGAAAGGTTCCGCGTTTGGCGGCGTGAAAGGTCGTTCCCAGTTACCGGGCATGGTTGAAGATGCGATGAAAGGTGATATCGATCTGGAACCGTTTGTCACGCATACCATGAGCCTGGATGAAATTAATGACGCCTTCGACCTGATGCATGAAGGCAAATCCATTCGAACCGTAATTCGTTACTGA", 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"gene_synonym", - "NP_414891.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAP3" - ], - [ - "gene_synonym", - "frmR" - ], - [ - "gene_synonym", - "EcoGene:EG13296" - ], - [ - "gene_synonym", - "GI:162135894" - ], - [ - "gene_synonym", - "ECK0354" - ], - [ - "gene_synonym", - "yaiN" - ] - ], - "dna_sequence": "ATGCCCAGTACTCCGGAAGAGAAGAAAAAGGTCCTTACTCGAGTTCGTCGTATTCGGGGGCAGATTGATGCTCTGGAACGGTCGCTGGAGGGTGATGCCGAATGCCGTGCCATACTCCAACAGATCGCTGCCGTTCGGGGCGCGGCTAATGGGCTGATGGCAGAAGTGCTTGAAAGCCATATCCGGGAAACGTTTGACCGAAATGACTGCTACAGCCGCGAAGTCAGCCAATCCGTTGACGACACTATTGAACTGGTTCGTGCCTATCTTAAATAG", - "dna_sequence_length": 276, - "functions": [ - "regulator protein that represses frmRAB operon" - ], - "id": "CDS_354", - "location": [ - [ - "NC_000913", - 379881, - "-", - 276 - ] - ], - "md5": "9dd1951a0d13876fa640cb91ec729761", - "parent_gene": "", - "protein_md5": "42aa88b8937af3dbc7154b9a93528a6f", - "protein_translation": "MPSTPEEKKKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAAVRGAANGLMAEVLESHIRETFDRNDCYSREVSQSVDDTIELVRAYLK", - "protein_translation_length": 91, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414892.1" - ], - [ - "gene_synonym", - "GI:16128343" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47534" - ], - [ - "gene_synonym", - "yaiO" - ], - [ - "gene_synonym", - "b0358" - ], - [ - "gene_synonym", - "GeneID:945014" - ], - [ - "gene_synonym", - "EcoGene:EG13297" - ], - [ - "gene_synonym", - "ASAP:ABE-0001230" - ], - [ - "gene_synonym", - "JW0349" - ], - [ - "gene_synonym", - "ECK0355" - ] - ], - "dna_sequence": "ATGATAAAACGGACGTTATTAGCGGCGGCCATTTTTAGCGCATTGCCCGCTTATGCCGGGTTAACTTCCATTACCGCGGGCTACGATTTTACCGATTATTCTGGCGATCATGGCAACCGTAATTTAGCGTATGCTGAACTGGTGGCGAAAGTTGAAAACGCAACGCTGCTTTTTAATCTTTCCCAGGGGCGTCGTGATTATGAAACTGAACATTTCAATGCCACTCGCGGTCAGGGTGCGGTCTGGTATAAATGGAATAACTGGCTGACAACCCGAACGGGTATTGCCTTTGCGGATAATACGCCGGTCTTTGCCCGCCAGGATTTTCGTCAGGATATTAACCTGGCCCTGTTACCAAAAACGCTTTTCACGACCGGTTATCGCTACACTAAATATTACGATGATGTCGAAGTCGATGCCTGGCAAGGCGGCGTATCACTCTATACTGGCCCGGTGATCACCAGCTACCGCTATACCCATTATGACTCCAGCGATGCAGGTGGTAGTTATAGCAATATGATTTCCGTGCGTCTGAATGACCCGCGCGGCACTGGTTATACGCAACTATGGCTAAGCCGCGGAACAGGTGCTTACACCTATGACTGGACGCCAGAAACACGCTACGGCAGCATGAAGAGCGTCAGTCTGCAACGTATTCAACCGCTGACTGAGCAACTTAATCTCGGGCTGACGGCAGGTAAAGTGTGGTACGACACCCCAACCGATGATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGA", - "dna_sequence_length": 774, - "functions": [ - "outer membrane protein" - ], - "id": "CDS_355", - "location": [ - [ - "NC_000913", - 380842, - "-", - 774 - ] - ], - "md5": "871613a4befe5420e031066f89535942", - "parent_gene": "", - "protein_md5": "4af68b08710e8e38578c22e3b511f9cf", - "protein_translation": "MIKRTLLAAAIFSALPAYAGLTSITAGYDFTDYSGDHGNRNLAYAELVAKVENATLLFNLSQGRRDYETEHFNATRGQGAVWYKWNNWLTTRTGIAFADNTPVFARQDFRQDINLALLPKTLFTTGYRYTKYYDDVEVDAWQGGVSLYTGPVITSYRYTHYDSSDAGGSYSNMISVRLNDPRGTGYTQLWLSRGTGAYTYDWTPETRYGSMKSVSLQRIQPLTEQLNLGLTAGKVWYDTPTDDFNGLQLAARLTWKF", - "protein_translation_length": 257, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4579" - ], - [ - "gene_synonym", - "yaiF" - ], - [ - "gene_synonym", - "GeneID:4056039" - ], - [ - "gene_synonym", - "ASAP:ABE-0001241" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75697" - ], - [ - "gene_synonym", - "ASAP:ABE-0001232" - ], - [ - "gene_synonym", - "EcoGene:EG14236" - ], - [ - "gene_synonym", - "yaiX" - ], - [ - "gene_synonym", - "ECK0356" - ], - [ - "gene_synonym", - "ASAP:ABE-0285111" - ], - [ - "gene_synonym", - "JW0350" - ] - ], - "dna_sequence": "ATGGACTTATTGCCTTTTTTACTGGACGCGAACCTCAGCGCGACAAACCCACCCGCTATTCCGCACTGGTGGAAGCGTCAACCGCTTATTCCCAACCTTCTGTCACAGGAACTGAAAAACTATCTGAAGCTTAATGTTAAAGAGAAAAATATTCAGATTGCAGACCAGGTAATTATTGATGAAACTGCAGGTGAAGTTGTTATCGGCGCGAATACCCGTATTTGTCATGGTGCCGTTATTCAGGGTCCGGTAGTGATTGGCGCAAACTGCCTGATAGGTAATAGTAATTATGCGTTTATTCGTCCTGGCACAATAATCAGCAATGGCGTAAAAATTGGTTTTGCCACCGAGATTAAAAATGCGGTTATTGAAGCGGAAGCAACGATTGGTCCGCAATGTTTTATTGCCGACTCGGTAGTTGCAAACCAGGCATATTTAGGCGCACAAGTACGTACCAGTAATCATCGTCTGGATGAACAGCCCGTGTCTGTTCGAACTCCAGAGGGAATTATCGCTACCGGATGCGATAAATTAGGTTGTTATATCGGGCAGCGTTCACGCCTTGGCGTACAAGTTATTATTTTGCCTGGGCGAATTATTTCCCCGAACACGCAACTTGGCCCGCGCGTGATTGTAGAACGTAATTTACCTACCGGAACTTATTCACTCCGACAAGAACTTATCCGTACAGGAGATTAA", - "dna_sequence_length": 699, - "id": "CDS_356", - "location": [ - [ - "NC_000913", - 382872, - "-", - 282 - ], - [ - "NC_000913", - 381260, - "-", - 417 - ] - ], - "md5": "11dbf8111857301b90eadc3a84d73ab9", - "parent_gene": "", - "protein_md5": "56f18451bbd1684f80d75aa94f605938", - "protein_translation": "MDLLPFLLDANLSATNPPAIPHWWKRQPLIPNLLSQELKNYLKLNVKEKNIQIADQVIIDETAGEVVIGANTRICHGAVIQGPVVIGANCLIGNSNYAFIRPGTIISNGVKIGFATEIKNAVIEAEATIGPQCFIADSVVANQAYLGAQVRTSNHRLDEQPVSVRTPEGIIATGCDKLGCYIGQRSRLGVQVIILPGRIISPNTQLGPRVIVERNLPTGTYSLRQELIRTGD", - "protein_translation_length": 232, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "insC1" - ], - [ - "gene_synonym", - "EcoGene:EG40003" - ], - [ - "gene_synonym", - "NP_414894.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0001237" - ], - [ - "gene_synonym", - "GI:145698224" - ], - [ - "gene_synonym", - "b0360" - ], - [ - "gene_synonym", - "ECK0357" - ], - [ - "gene_synonym", - "GeneID:945025" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF40" - ] - ], - "dna_sequence": "ATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAA", - "dna_sequence_length": 366, - "functions": [ - "IS2 repressor TnpA" - ], - "id": "CDS_357", - "location": [ - [ - "NC_000913", - 381351, - "+", - 366 - ] - ], - "md5": "9ed51bec276857ffa1620cbb329c920f", - "parent_gene": "", - "protein_md5": "2766fdd4e9e285df2a70f8c10f901f65", - "protein_translation": "MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945203" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF53" - ], - [ - "gene_synonym", - "EcoGene:EG40004" - ], - [ - "gene_synonym", - "ECK0358" - ], - [ - "gene_synonym", - "NP_414895.1" - ], - [ - "gene_synonym", - "insD1" - ], - [ - "gene_synonym", - "b0361" - ], - [ - "gene_synonym", - "GI:16128346" - ], - [ - "gene_synonym", - "ASAP:ABE-0001239" - ] - ], - "dna_sequence": "GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG", - "dna_sequence_length": 906, - "functions": [ - "IS2 transposase TnpB" - ], - "id": "CDS_358", - "location": [ - [ - "NC_000913", - 381674, - "+", - 906 - ] - ], - "md5": "d7a869f3d04f69c9bbc5e3da4131ca74", - "parent_gene": "", - "protein_md5": "e9d0a5629c6cb4141f55451e6130cec7", - "protein_translation": "MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI", - "protein_translation_length": 301, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414897.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47536" - ], - [ - "gene_synonym", - "ASAP:ABE-0001243" - ], - [ - "gene_synonym", - "yaiP" - ], - [ - "gene_synonym", - "GI:16128348" - ], - [ - "gene_synonym", - "GeneID:945308" - ], - [ - "gene_synonym", - "b0363" - ], - [ - "gene_synonym", - "ECK0360" - ], - [ - "gene_synonym", - "JW0355" - ], - [ - "gene_synonym", - "EcoGene:EG13298" - ] - ], - "dna_sequence": "ATGAAAACCTGGATATTTATCTGTATGTCCATAGCAATGTTGCTATGGTTTTTAAGTACGCTAAGACGTAAACCCAGTCAAAAGAAAGGCTGTATTGACGCCATTATACCTGCGTATAACGAAGGCCCGTGTCTGGCGCAGTCACTGGATAATCTACTGCGTAACCCTTATTTTTGCCGGGTAATTTGCGTTAACGACGGCTCCACGGACAATACCGAAGCGGTCATGGCGGAAGTCAAACGCAAATGGGGCGACCGCTTTGTTGCCGTCACGCAAAAAAATACCGGTAAAGGTGGTGCGCTGATGAATGGCCTCAATTACGCCACCTGCGACCAGGTTTTTTTAAGTGATGCCGACACCTATGTTCCGCCCGATCAAGACGGAATGGGCTATATGCTGGCAGAAATTGAGCGCGGTGCCGATGCCGTAGGCGGCATTCCCTCTACTGCGTTGAAAGGCGCGGGTCTGTTACCGCACATCCGCGCGACCGTAAAGTTGCCGATGATTGTTATGAAGCGCACGCTACAGCAGCTCCTGGGTGGCGCACCGTTTATTATCAGCGGTGCCTGCGGGATGTTCCGTACTGATGTATTGCGTAAGTTCGGTTTCTCGGATCGTACTAAAGTCGAAGACCTTGATCTCACCTGGACATTGGTGGCAAACGGCTACCGTATTCGGCAGGCGAATCGCTGCATCGTATACCCACAGGAATGCAACAGCCCGCGTGAGGAGTGGCGTCGCTGGCGGCGTTGGATTGTGGGATACGCGGTCTGTATGCGCCTGCATAAAAGACTTTTATTTAGCCGCTTCGGTATCTTCAGTATATTTCCTATGCTGTTGGTTGTGCTTTATGGCGTTGGGATTTATCTCACTACCTGGTTTAATGAATTCATCACCACCGGGCCGCATGGAGTGGTGTTGGCAATGTTTCCGCTTATCTGGGTCGGCGTAGTTTGTGTTATTGGTGCTTTTAGCGCCTGGTTTCATCGTTGCTGGTTGTTGGTGCCTTTAGCGCCGCTTTCCGTTGTGTATGTATTATTAGCTTATGCCATCTGGATTATTTATGGACTTATTGCCTTTTTTACTGGACGCGAACCTCAGCGCGACAAACCCACCCGCTATTCCGCACTGGTGGAAGCGTCAACCGCTTATTCCCAACCTTCTGTCACAGGAACTGAAAAACTATCTGAAGCTTAA", - "dna_sequence_length": 1197, - "functions": [ - "putative family 2 glycosyltransferase" - ], - "id": "CDS_359", - "location": [ - [ - "NC_000913", - 383935, - "-", - 1197 - ] - ], - "md5": "9e9a981207c965cbb46c5bc14d22d3ba", - "parent_gene": "", - "protein_md5": "caadef463d9eed2abb0700f4a1ef3286", - "protein_translation": "MKTWIFICMSIAMLLWFLSTLRRKPSQKKGCIDAIIPAYNEGPCLAQSLDNLLRNPYFCRVICVNDGSTDNTEAVMAEVKRKWGDRFVAVTQKNTGKGGALMNGLNYATCDQVFLSDADTYVPPDQDGMGYMLAEIERGADAVGGIPSTALKGAGLLPHIRATVKLPMIVMKRTLQQLLGGAPFIISGACGMFRTDVLRKFGFSDRTKVEDLDLTWTLVANGYRIRQANRCIVYPQECNSPREEWRRWRRWIVGYAVCMRLHKRLLFSRFGIFSIFPMLLVVLYGVGIYLTTWFNEFITTGPHGVVLAMFPLIWVGVVCVIGAFSAWFHRCWLLVPLAPLSVVYVLLAYAIWIIYGLIAFFTGREPQRDKPTRYSALVEASTAYSQPSVTGTEKLSEA", - "protein_translation_length": 398, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P71311" - ], - [ - "gene_synonym", - "EcoGene:EG13302" - ], - [ - "gene_synonym", - "NP_414898.4" - ], - [ - "gene_synonym", - "GI:90111121" - ], - [ - "gene_synonym", - "GeneID:946967" - ], - [ - "gene_synonym", - "ASAP:ABE-0001249" - ], - [ - "gene_synonym", - "yaiS" - ], - [ - "gene_synonym", - "ECK0361" - ], - [ - "gene_synonym", - "JW0356" - ], - [ - "gene_synonym", - "b0364" - ] - ], - "dna_sequence": "GTGGATAAGGTTTTAGATTCAGCCCTCCTTTCTTCGGCAAATAAAAGAAAGGGTATCCTTGCTATTGGCGCACATCCTGACGATATAGAATTAGGCTGTGGCGCATCGCTTGCTCGTCTTGCGCAAAAAGGAATTTATATCGCAGCCGTGGTGATGACTACCGGCAACTCTGGCACAGATGGAATAATCGATCGCCATGAAGAATCGCGCAACGCCCTAAAGATATTAGGGTGCCACCAAACTATTCATCTTAATTTTGCTGACACCCGCGCTCATTTACAGCTCAATGATATGATTTCCGCCCTGGAAGACATCATTAAAAATCAAATTCCTTCTGATGTTGAAATCATGCGGGTATATACCATGCATGATGCCGACCGCCATCAGGATCATCTTGCTGTTTATCAAGCTTCAATGGTTGCCTGCCGAACTATTCCGCAAATTCTCGGCTACGAAACCCCAAGTACCTGGCTTTCATTTATGCCTCAGGTTTTTGAATCCGTTAAAGAAGAATATTTCACAGTCAAACTTGCTGCATTAAAAAAACATAAAAGCTAG", - "dna_sequence_length": 558, - "functions": [ - "putative PIG-L family deacetylase" - ], - "id": "CDS_360", - "location": [ - [ - "NC_000913", - 384616, - "-", - 558 - ] - ], - "md5": "d46b0996844fb6eb3b29aef8b8843de3", - "parent_gene": "", - "protein_md5": "1a6966fe480a96f12c4f1ee392dce1f3", - "protein_translation": "MDKVLDSALLSSANKRKGILAIGAHPDDIELGCGASLARLAQKGIYIAAVVMTTGNSGTDGIIDRHEESRNALKILGCHQTIHLNFADTRAHLQLNDMISALEDIIKNQIPSDVEIMRVYTMHDADRHQDHLAVYQASMVACRTIPQILGYETPSTWLSFMPQVFESVKEEYFTVKLAALKKHKS", - "protein_translation_length": 185, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ssiA" - ], - [ - "gene_synonym", - "NP_414899.2" - ], - [ - "gene_synonym", - "tauA" - ], - [ - "gene_synonym", - "EcoGene:EG13300" - ], - [ - "gene_synonym", - "ASAP:ABE-0001256" - ], - [ - "gene_synonym", - "GI:90111122" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47537" - ], - [ - "gene_synonym", - "yaiR" - ], - [ - "gene_synonym", - "JW0357" - ], - [ - "gene_synonym", - "GeneID:945030" - ], - [ - "gene_synonym", - "ECK0362" - ], - [ - "gene_synonym", - "b0365" - ] - ], - "dna_sequence": "ATGGCAATTTCATCGCGTAACACACTTCTTGCCGCACTGGCATTCATCGCTTTTCAGGCACAGGCGGTGAACGTCACCGTGGCGTATCAAACCTCAGCCGAACCGGCGAAAGTGGCTCAGGCCGACAACACCTTTGCTAAAGAAAGCGGAGCAACCGTGGACTGGCGTAAGTTTGACAGCGGAGCCAGCATCGTGCGGGCGCTGGCTTCAGGCGACGTGCAAATCGGCAACCTCGGTTCCAGCCCGTTAGCGGTTGCAGCCAGCCAACAGGTGCCGATTGAAGTCTTCTTGCTGGCGTCAAAACTGGGTAACTCCGAAGCGCTGGTGGTAAAGAAAACTATCAGCAAACCGGAAGATCTGATTGGCAAACGCATCGCCGTACCGTTTATCTCCACCACCCACTACAGCCTGCTGGCGGCACTGAAACACTGGGGCATTAAACCCGGGCAAGTGGAGATTGTGAACCTGCAGCCGCCCGCGATTATCGCTGCCTGGCAGCGGGGAGATATTGATGGTGCTTATGTCTGGGCACCGGCGGTTAACGCCCTGGAAAAAGACGGCAAGGTGTTGACCGATTCTGAACAGGTCGGGCAGTGGGGCGCGCCAACGCTGGACGTCTGGGTGGTGCGCAAAGATTTTGCCGAGAAACATCCTGAGGTCGTGAAAGCGTTCGCTAAAAGCGCCATCGATGCTCAGCAACCGTACATTGCTAACCCAGACGTGTGGCTGAAACAGCCGGAAAACATCAGCAAACTGGCGCGTTTAAGCGGCGTGCCTGAAGGTGACGTTCCGGGGCTGGTGAAGGGGAATACCTATCTGACGCCGCAGCAACAAACGGCAGAACTGACCGGACCGGTGAACAAAGCGATCATCGACACCGCGCAGTTTTTGAAAGAGCAGGGCAAGGTCCCGGCTGTAGCGAATGATTACAGCCAGTACGTTACCTCGCGCTTCGTGCAATAA", - "dna_sequence_length": 963, - "functions": [ - "taurine ABC transporter periplasmic binding protein" - ], - "id": "CDS_361", - "location": [ - [ - "NC_000913", - 385232, - "+", - 963 - ] - ], - "md5": "8ff6ecb099b73518a6bace316cc5d2eb", - "parent_gene": "", - "protein_md5": "ac3787434fe6e316d5a66e7e54aeb9c9", - "protein_translation": "MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQADNTFAKESGATVDWRKFDSGASIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKLGNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKPGQVEIVNLQPPAIIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHPEVVKAFAKSAIDAQQPYIANPDVWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQQQTAELTGPVNKAIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ", - "protein_translation_length": 320, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tauB" - ], - [ - "gene_synonym", - "ssiB" - ], - [ - "gene_synonym", - "GI:16128351" - ], - [ - "gene_synonym", - "ASAP:ABE-0001259" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47538" - ], - [ - "gene_synonym", - "yaiQ" - ], - [ - "gene_synonym", - "NP_414900.1" - ], - [ - "gene_synonym", - "JW0358" - ], - [ - "gene_synonym", - "ECK0363" - ], - [ - "gene_synonym", - "b0366" - ], - [ - "gene_synonym", - "EcoGene:EG13299" - ], - [ - "gene_synonym", - "GeneID:945027" - ] - ], - "dna_sequence": "ATGCTGCAAATCTCTCATCTTTACGCCGATTATGGCGGCAAACCGGCACTGGAAGATATCAACCTGACGCTGGAAAGCGGCGAGCTACTGGTGGTGCTGGGGCCGTCCGGCTGCGGTAAAACCACCCTGCTGAATCTGATTGCCGGTTTTGTGCCTTATCAGCATGGCAGCATTCAACTGGCGGGTAAGCGTATTGAGGGACCGGGAGCAGAGCGTGGCGTAGTTTTTCAGAATGAAGGGCTACTACCGTGGCGCAATGTACAGGACAACGTGGCGTTCGGCCTGCAATTGGCAGGTATAGAGAAAATGCAGCGACTGGAAATCGCGCACCAGATGCTGAAAAAAGTGGGGCTGGAAGGCGCAGAAAAACGCTACATCTGGCAGCTTTCCGGTGGTCAACGTCAGCGGGTGGGGATTGCTCGTGCGCTGGCGGCGAATCCCCAGCTGTTATTACTCGACGAACCGTTTGGTGCGCTGGACGCCTTCACCCGCGACCAGATGCAAACCCTGCTGCTGAAACTCTGGCAGGAGACGGGCAAGCAGGTGCTGTTGATTACCCACGATATAGAAGAAGCGGTGTTTATGGCGACTGAACTGGTTCTGCTTTCATCCGGCCCTGGCCGTGTGCTGGAGCGGCTGCCGCTCAACTTTGCTCGCCGCTTTGTTGCGGGAGAGTCGAGCCGCAGCATCAAGTCCGATCCACAATTCATCGCCATGCGCGAATATGTTTTAAGCCGCGTATTTGAGCAACGGGAGGCGTTCTCATGA", - "dna_sequence_length": 768, - "functions": [ - "taurine ABC transporter ATPase" - ], - "id": "CDS_362", - "location": [ - [ - "NC_000913", - 386207, - "+", - 768 - ] - ], - "md5": "6009723f67d206e21a0be5075d2063d9", - "parent_gene": "", - "protein_md5": "4886c79ded078ae53828005123e3f29e", - "protein_translation": "MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEKMQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSSGPGRVLERLPLNFARRFVAGESSRSIKSDPQFIAMREYVLSRVFEQREAFS", - "protein_translation_length": 255, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13301" - ], - [ - "gene_synonym", - "tauC" - ], - [ - "gene_synonym", - "ssiC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47539" - ], - [ - "gene_synonym", - "GI:16128352" - ], - [ - "gene_synonym", - "NP_414901.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001261" - ], - [ - "gene_synonym", - "yaiJ" - ], - [ - "gene_synonym", - "ECK0364" - ], - [ - "gene_synonym", - "JW0359" - ], - [ - "gene_synonym", - "b0367" - ], - [ - "gene_synonym", - "GeneID:945026" - ] - ], - "dna_sequence": "ATGAGTGTGCTCATTAATGAAAAACTGCATTCGCGGCGGCTGAAATGGCGCTGGCCGCTCTCGCGTCAGGTGACCTTAAGCATTGGCACGTTAGCGGTTTTACTCACCGTATGGTGGACGGTGGCGACGCTGCAACTGATTAGCCCGCTATTTTTGCCGCCGCCGCAACAGGTACTGGAAAAACTACTCACCATTGCCGGACCGCAAGGCTTTATGGACGCCACGCTGTGGCAGCATCTGGCAGCCAGTCTGACGCGCATTATGCTGGCGCTATTTGCAGCGGTGTTGTTCGGTATTCCGGTCGGGATCGCGATGGGACTTAGCCCTACGGTACGCGGCATTCTGGATCCGATAATCGAGCTTTATCGTCCGGTGCCGCCGCTGGCTTATTTGCCGCTGATGGTGATCTGGTTTGGTATTGGTGAAACCTCGAAGATCTTACTGATCTATTTAGCGATTTTTGCACCGGTGGCGATGTCGGCGCTGGCGGGGGTGAAAAGCGTGCAGCAGGTTCGCATTCGTGCCGCCCAGTCGCTGGGTGCCAGCCGTGCGCAGGTGCTGTGGTTTGTCATTTTGCCCGGTGCGCTGCCGGAAATCCTCACCGGATTACGTATTGGTCTGGGGGTGGGCTGGTCTACGCTGGTGGCGGCGGAGCTGATTGCCGCGACGCGCGGTTTAGGATTTATGGTTCAGTCAGCGGGTGAATTTCTCGCAACTGACGTGGTGCTGGCGGGGATCGCGGTGATTGCGATTATCGCCTTTCTTTTAGAACTGGGTCTGCGCGCGTTACAGCGCCGCCTGACGCCCTGGCATGGAGAAGTACAATGA", - "dna_sequence_length": 828, - "functions": [ - "taurine ABC transporter permease" - ], - "id": "CDS_363", - "location": [ - [ - "NC_000913", - 386971, - "+", - 828 - ] - ], - "md5": "26725be1bc5568c4fd762a3f60b79b94", - "parent_gene": "", - "protein_md5": "577861f0dcd1161819cf7d44d6b95308", - "protein_translation": "MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVATLQLISPLFLPPPQQVLEKLLTIAGPQGFMDATLWQHLAASLTRIMLALFAAVLFGIPVGIAMGLSPTVRGILDPIIELYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMSALAGVKSVQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRALQRRLTPWHGEVQ", - "protein_translation_length": 275, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tauD" - ], - [ - "gene_synonym", - "yaiG" - ], - [ - "gene_synonym", - "NP_414902.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001263" - ], - [ - "gene_synonym", - "EcoGene:EG12423" - ], - [ - "gene_synonym", - "b0368" - ], - [ - "gene_synonym", - "JW0360" - ], - [ - "gene_synonym", - "GeneID:945021" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37610" - ], - [ - "gene_synonym", - "GI:16128353" - ], - [ - "gene_synonym", - "ECK0365" - ], - [ - "gene_synonym", - "ssiD" - ] - ], - "dna_sequence": "ATGAGTGAACGTCTGAGCATTACCCCGCTGGGGCCGTATATCGGCGCACAAATTTCGGGTGCCGACCTGACGCGCCCGTTAAGCGATAATCAGTTTGAACAGCTTTACCATGCGGTGCTGCGCCATCAGGTGGTGTTTCTACGCGATCAAGCTATTACGCCGCAGCAGCAACGCGCGCTGGCCCAGCGTTTTGGCGAATTGCATATTCACCCTGTTTACCCGCATGCCGAAGGGGTTGACGAGATCATCGTGCTGGATACCCATAACGATAATCCGCCAGATAACGACAACTGGCATACCGATGTGACATTTATTGAAACGCCACCCGCAGGGGCGATTCTGGCAGCTAAAGAGTTACCTTCGACCGGCGGTGATACGCTCTGGACCAGCGGTATTGCGGCCTATGAGGCGCTCTCTGTTCCCTTCCGCCAGCTGCTGAGTGGGCTGCGTGCGGAGCATGATTTCCGTAAATCGTTCCCGGAATACAAATACCGCAAAACCGAGGAGGAACATCAACGCTGGCGCGAGGCGGTCGCGAAAAACCCGCCGTTGCTACATCCGGTGGTGCGAACGCATCCGGTGAGCGGTAAACAGGCGCTGTTTGTGAATGAAGGCTTTACTACGCGAATTGTTGATGTGAGCGAGAAAGAGAGCGAAGCCTTGTTAAGTTTTTTGTTTGCCCATATCACCAAACCGGAGTTTCAGGTGCGCTGGCGCTGGCAACCAAATGATATTGCGATTTGGGATAACCGCGTGACCCAGCACTATGCCAATGCCGATTACCTGCCACAGCGACGGATAATGCATCGGGCGACGATCCTTGGGGATAAACCGTTTTATCGGGCGGGGTAA", - "dna_sequence_length": 852, - "functions": [ - "taurine dioxygenase, 2-oxoglutarate-dependent" - ], - "id": "CDS_364", - "location": [ - [ - "NC_000913", - 387795, - "+", - 852 - ] - ], - "md5": "e8dc4327ec5a8148fe19455cc4ff0062", - "parent_gene": "", - "protein_md5": "f26d5d282df7f8f52826e8a91d695d9a", - "protein_translation": "MSERLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKESEALLSFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGDKPFYRAG", - "protein_translation_length": 283, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hemB" - ], - [ - "gene_synonym", - "GeneID:945017" - ], - [ - "gene_synonym", - "ASAP:ABE-0001266" - ], - [ - "gene_synonym", - "GI:90111123" - ], - [ - "gene_synonym", - "b0369" - ], - [ - "gene_synonym", - "EcoGene:EG10428" - ], - [ - "gene_synonym", - "JW0361" - ], - [ - "gene_synonym", - "ECK0366" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACB2" - ], - [ - "gene_synonym", - "ncf" - ], - [ - "gene_synonym", - "NP_414903.4" - ] - ], - "dna_sequence": "ATGACAGACTTAATCCAACGCCCTCGTCGCCTGCGCAAATCTCCTGCGCTGCGCGCTATGTTTGAAGAGACAACACTTAGCCTTAACGACCTGGTGTTGCCGATCTTTGTTGAAGAAGAAATTGACGACTACAAAGCCGTTGAAGCCATGCCAGGCGTGATGCGCATTCCAGAGAAACATCTGGCACGCGAAATTGAACGCATCGCCAACGCCGGTATTCGTTCCGTGATGACTTTTGGCATCTCTCACCATACCGATGAAACCGGCAGCGATGCCTGGCGGGAAGATGGACTGGTGGCGCGTATGTCGCGCATCTGCAAGCAGACCGTGCCAGAAATGATCGTTATGTCAGACACCTGCTTCTGTGAATACACTTCTCACGGTCACTGCGGTGTGCTGTGCGAGCATGGCGTCGACAACGACGCGACTCTGGAAAATTTAGGCAAGCAAGCCGTGGTTGCAGCTGCTGCAGGTGCAGACTTCATCGCCCCTTCCGCCGCGATGGACGGCCAGGTACAGGCGATTCGTCAGGCGCTGGACGCTGCGGGATTTAAAGATACGGCGATTATGTCGTATTCGACCAAGTTCGCCTCCTCCTTTTATGGCCCGTTCCGTGAAGCTGCCGGAAGCGCATTAAAAGGCGACCGCAAAAGCTATCAGATGAACCCAATGAACCGTCGTGAGGCGATTCGTGAATCACTGCTGGATGAAGCCCAGGGCGCAGACTGCCTGATGGTTAAACCTGCTGGAGCGTACCTCGACATCGTGCGTGAGCTGCGTGAACGTACTGAATTGCCGATTGGCGCGTATCAGGTGAGCGGTGAGTATGCGATGATTAAGTTCGCCGCGCTGGCGGGTGCTATAGATGAAGAGAAAGTCGTGCTCGAAAGCTTAGGTTCGATTAAGCGTGCGGGTGCGGATCTGATTTTCAGCTACTTTGCGCTGGATTTGGCTGAGAAGAAGATTCTGCGTTAA", - "dna_sequence_length": 975, - "functions": [ - "5-aminolevulinate dehydratase (porphobilinogen synthase)" - ], - "id": "CDS_365", - "location": [ - [ - "NC_000913", - 389727, - "-", - 975 - ] - ], - "md5": "d29386c1b4e92b37bbef589903917b0c", - "parent_gene": "", - "protein_md5": "28ea057f2be462c5d1aa36c12293c25a", - "protein_translation": "MTDLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGADFIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKKILR", - "protein_translation_length": 324, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4580" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77199" - ], - [ - "gene_synonym", - "ASAP:ABE-0001274" - ], - [ - "gene_synonym", - "ASAP:ABE-0001288" - ], - [ - "gene_synonym", - "EcoGene:EG13605" - ], - [ - "gene_synonym", - "ECK0368" - ], - [ - "gene_synonym", - "GeneID:4056040" - ], - [ - "gene_synonym", - "JW0362" - ], - [ - "gene_synonym", - "yaiT" - ], - [ - "gene_synonym", - "ASAP:ABE-0285112" - ], - [ - "gene_synonym", - "yaiU" - ] - ], - "dna_sequence": "ATGCACTCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGCAGCAAACTATGATACCTGGACTTATATCGATAATCCCGTTACAGCACTTGATTGGGATCATATGGATAAGGCAGGCACTGTAGATGGCAACTATGTAAACTATAGTGGTTTTGTCTATTACAACAACACCAATGGTGATTTCGATCAGTCCTTTAACGGCGATACCGTTAACGGCACGATCTCAACCTATTATTTGAACCATGATTATGCAGACAGTACTGCTAATCAGCTTGATATCAGTAATTCAGTGATTCACGGTTCGATTACTTCTATGCTGCCTGGCGGTTATTATGATCGTTTTGATGCAGATGGTAATAATCTGGGTGGATATGATTTTTACACTGATGCGGTTGTTGATACACACTGGCGTGATGGTGATGTTTTCACTTTGAACATTGCTAACACTACTATTGATGATGATTATGAAGCTCTTTACTTCACTGATTCTTATAAAGATGGTGATGTAACCAAGCACACAAATGAGACATTTGATACAAGTGAAGGCGTTGCTGTTAATCTTGATGTAGAAAGTAACATCAATATTTCCAATAACTCCCGCGTTGCAGGTATTGCATTATCTCAAGGTAATACTTACAACGAAACCTACACTACCGAATCTCATACTTGGGATAACAATATCTCTGTAAAAGATTCCACAGTGACTTCGGGTTCAAATTATATCCTGGATAGCAATACTTATGGCAAAACTGGTCACTTTGGCAATTCTGATGAACCGAGTGATTATGCTGGCCCGGGTGATGTTGCAATGTCCTTTACTGCTTCAGGTTCCGACTATGCGATGAAGAACAATGTATTCCTCAGCAATTCAACGCTGATGGGTGATGTTGCCTTTACCAGCACCTGGAATAGTAATTTTGATCCGAATGGTCATGATTCCAACGGTGACGGGGTGAAAGATACCAACGGGGGTTGGACTGATGATAGCCTCAACGTTGATGAACTAAATCTCACTCTCGATAACGGAAGCAAGTGGGTTGGTCAGGCAATTTATAACGTTGCTGAAACGTCAGCAATGTATGATGTTGCTACAAACAGCCTTACTCCTGATGCAACATATGAAAACAATGACTGGAAACGTGTTGTTGATGACAAGGTCTTCCAGAGCGGTGTATTTAACGTAGCGTTGAATAACGGTTCTGAATGGGATACTACAGGTCGTTCCATCGTTGATACCTTGACAGTTAATAATGGTTCTCAGGTTAATGTTTCGGAATCTAAATTAACTTCAGATACTATCGATTTAACTAACGGTTCTTCGCTGAACATTGGTGAAGATGGCTACGTTGATACCGATCATCTGACTATTAACTCCTACAGTACTGTTGCGTTGACCGAATCTACTGGGTGGGGGGCTGATTACAACCTGTACGCCAATACTATCACCGTAACTAACGGCGGTGTATTGGATGTGAACGTTGATCAGTTCGATACTGAAGCTTTCCGTACTGACAAACTGGAACTGACCAGCGGCAACATCGCTGACCATAACGGTAACGTAGTATCTGGTGTGTTCGATATCCATAGCAGCGATTACGTTCTGAACGCTGATCTGGTGAACGACCGTACCTGGGATACTTCCAAGTCTAACTACGGTTACGGTATTGTTGCTATGAACTCTGATGGTCACCTGACTATCAACGGTAACGGCGACGTAGACAACGGTACTGAACTGGATAACAGCTCTGTAGACAATGTTGTTGCTGCAACCGGTAACTACAAAGTTCGTATCGACAACGCAACTGGCGCTGGCGCTATCGCTGATTACAAAGATAAAGAAATTATCTACGTAAACGACGTCAACAGCAACGCGACCTTCTCTGCTGCTAACAAAGCTGACCTGGGTGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCTGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAACTCTCGTCATGGCCTGGCTGATAACGGCGGCGCATGGGTAAGCTACTTCGGTGGTAACTTCAACGGCGACAACGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAACAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGACATGAATGACCGTTCTGGTCAGGTGGATCAAGACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCTACTCTCACTTCAACAACGACCTGTCTGCAACCATGAGCAACGGTACTTACGTTGACGGTAGCACCAACTCCGACGCTTGGGGCTTCGGTTTGAAAGCCGGTTACGACTTCAAACTGGGTGATGCTGGTTACGTGACTCCTTACGGCAGCGTTTCTGGTCTGTTCCAGTCTGGTGATGACTACCAGCTGAGCAACGACATGAAAGTTGACGGTCAGTCTTACGACAGCATGCGTTATGAACTGGGTGTAGATGCAGGTTATACCTTCACCTACAGCGAAGATCAGGCTCTGACTCCGTACTTCAAACTGGCTTACGTCTACGACGACTCTAACAACGATAACGATGTGAACGGCGATTCCATCGATAACGGTACTGAAGGGTCTGCGGTACGTGTTGGTCTGGGTACTCAGTTTAGCTTCACCAAGAACTTCAGCGCCTATACCGATGCTAACTACCTCGGTGGTGGTGACGTAGATCAAGACTGGTCCGCGAACGTGGGTGTTAAATATACCTGGTAA", - "dna_sequence_length": 2907, - "id": "CDS_366", - "location": [ - [ - "NC_000913", - 390251, - "+", - 1458 - ], - [ - "NC_000913", - 392970, - "+", - 1449 - ] - ], - "md5": "684ceacf89bc19348f5e9cd16dd60103", - "parent_gene": "", - "protein_md5": "7b0211c7e767c5a0dad83c01ab71aaa3", - "protein_translation": "MHSWKKKLVVSQLALACTLAITSQANAANYDTWTYIDNPVTALDWDHMDKAGTVDGNYVNYSGFVYYNNTNGDFDQSFNGDTVNGTISTYYLNHDYADSTANQLDISNSVIHGSITSMLPGGYYDRFDADGNNLGGYDFYTDAVVDTHWRDGDVFTLNIANTTIDDDYEALYFTDSYKDGDVTKHTNETFDTSEGVAVNLDVESNINISNNSRVAGIALSQGNTYNETYTTESHTWDNNISVKDSTVTSGSNYILDSNTYGKTGHFGNSDEPSDYAGPGDVAMSFTASGSDYAMKNNVFLSNSTLMGDVAFTSTWNSNFDPNGHDSNGDGVKDTNGGWTDDSLNVDELNLTLDNGSKWVGQAIYNVAETSAMYDVATNSLTPDATYENNDWKRVVDDKVFQSGVFNVALNNGSEWDTTGRSIVDTLTVNNGSQVNVSESKLTSDTIDLTNGSSLNIGEDGYVDTDHLTINSYSTVALTESTGWGADYNLYANTITVTNGGVLDVNVDQFDTEAFRTDKLELTSGNIADHNGNVVSGVFDIHSSDYVLNADLVNDRTWDTSKSNYGYGIVAMNSDGHLTINGNGDVDNGTELDNSSVDNVVAATGNYKVRIDNATGAGAIADYKDKEIIYVNDVNSNATFSAANKADLGAYTYQAEQRGNTVVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYVTPYGSVSGLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNNDNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWSANVGVKYTW", - "protein_translation_length": 968, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128357" - ], - [ - "gene_synonym", - "NP_414906.1" - ], - [ - "gene_synonym", - "GeneID:945036" - ], - [ - "gene_synonym", - "EcoGene:EG40006" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF80" - ], - [ - "gene_synonym", - "ASAP:ABE-0001277" - ], - [ - "gene_synonym", - "insF1" - ], - [ - "gene_synonym", - "b0372" - ], - [ - "gene_synonym", - "ECK0299" - ] - ], - "dna_sequence": "ATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGACTGAGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAG", - "dna_sequence_length": 867, - "functions": [ - "IS3 transposase B" - ], - "id": "CDS_367", - "location": [ - [ - "NC_000913", - 392605, - "-", - 867 - ] - ], - "md5": "f16497ced719778b623ae488d3ff6549", - "parent_gene": "", - "protein_md5": "d747daab607a7e429605aaffca2556f8", - "protein_translation": "MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA", - "protein_translation_length": 288, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001279" - ], - [ - "gene_synonym", - "NP_414907.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF67" - ], - [ - "gene_synonym", - "EcoGene:EG40005" - ], - [ - "gene_synonym", - "GeneID:946900" - ], - [ - "gene_synonym", - "insE1" - ], - [ - "gene_synonym", - "b0373" - ], - [ - "gene_synonym", - "GI:226524701" - ], - [ - "gene_synonym", - "ECK0298" - ] - ], - "dna_sequence": "ATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA", - "dna_sequence_length": 300, - "functions": [ - "IS3 transposase A" - ], - "id": "CDS_368", - "location": [ - [ - "NC_000913", - 392901, - "-", - 300 - ] - ], - "md5": "2b8299a430402ee6e8586f7af8039b36", - "parent_gene": "", - "protein_md5": "03ddb941ec5f7556890ce78365da94d2", - "protein_translation": "MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK", - "protein_translation_length": 99, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001290" - ], - [ - "gene_synonym", - "NP_414909.2" - ], - [ - "gene_synonym", - "ECK0370" - ], - [ - "gene_synonym", - "EcoGene:EG13607" - ], - [ - "gene_synonym", - "JW0366" - ], - [ - "gene_synonym", - "GeneID:946902" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAP5" - ], - [ - "gene_synonym", - "yaiV" - ], - [ - "gene_synonym", - "GI:226524702" - ], - [ - "gene_synonym", - "b0375" - ] - ], - "dna_sequence": "ATGTTATCTGTAGTTAAACCTCTTCAGGAATTTGGTAAGCTCGATAAATGTTTGTCCAGATACGGTACGCGCTTCGAGTTTAATAATGAAAAGCAAGTTATATTTTCCAGTGATGTCAATAACGAAGATACTTTCGTTATTTTAGAGGGAGTTATCTCTCTGCGTAGAGAAGAAAACGTACTTATCGGTATTACCCAGGCTCCTTATATTATGGGGCTGGCTGATGGTTTAATGAAAAACGATATACCATACAAATTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGGCAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGTGTGATGAATTATATCCATCAACGTACACGCATATCGCGTTCTGTCGTCGCAGAAGTTCTCGCTGCTTTGCGTAAAGGCGGCTATATCGAAATGAATAAAGGCAAACTGGTCGCTATCAACCGTTTGCCTTCAGAGTATTAA", - "dna_sequence_length": 624, - "functions": [ - "putative transcriptional regulator" - ], - "id": "CDS_369", - "location": [ - [ - "NC_000913", - 394506, - "+", - 624 - ] - ], - "md5": "8f41b85770a43f21e88378f6cd1bc33a", - "parent_gene": "", - "protein_md5": "ed38d7247e1cb3e9c256040c013699f8", - "protein_translation": "MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY", - "protein_translation_length": 207, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001292" - ], - [ - "gene_synonym", - "GI:16128361" - ], - [ - "gene_synonym", - "ampH" - ], - [ - "gene_synonym", - "JW5052" - ], - [ - "gene_synonym", - "ECK0371" - ], - [ - "gene_synonym", - "yaiH" - ], - [ - "gene_synonym", - "EcoGene:EG12867" - ], - [ - "gene_synonym", - "GeneID:946904" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD70" - ], - [ - "gene_synonym", - "NP_414910.1" - ], - [ - "gene_synonym", - "b0376" - ] - ], - "dna_sequence": "TTGAAACGTAGTCTGCTTTTTTCTGCCGTGCTGTGTGCGGCGTCATTGACCTCCGTCCATGCGGCGCAGCCGATCACTGAACCGGAGTTTGCCTCTGATATTGTCGATCGTTATGCCGATCATATTTTTTACGGCAGCGGTGCCACGGGGATGGCTCTGGTTGTTATCGACGGTAACCAGCGCGTCTTTCGCAGTTATGGCGAAACGCGACCTGGTAATAACGTTCGCCCGCAGCTGGATTCGGTCGTGCGTATTGCTTCCCTCACCAAGCTAATGACCAGTGAGATGCTGGTGAAATTGCTCGACCAGGGGACCGTGAAGTTAAACGATCCGCTAAGTAAATATGCTCCGCCAGGCGCACGCGTGCCAACCTACAATGGGACGCCCATTACGCTGGTCAATCTGGCAACCCATACCAGCGCCCTGCCCCGTGAACAGCCCGGTGGCGCGGCACATCGTCCGGTGTTTGTCTGGCCAACGCGCGAGCAACGCTGGAAATACCTTTCTACGGCGAAGCTGAAAGCCGCGCCAGGCAGTCAGGCGGCGTACTCTAACCTTGCGTTCGACCTGCTGGCAGATGCACTGGCGAATGCGTCCGGCAAGCCTTATACCCAGTTGTTTGAAGAGCAGATTACCCGTCCATTGGGGATGAAAGACACCACCTACACCCCCTCACCGGATCAGTGCCGCCGTTTAATGGTTGCTGAGCGCGGTGCCAGTCCGTGCAATAACACGCTGGCGGCAATTGGCAGCGGCGGCGTCTATTCCACGCCTGGCGATATGATGCGCTGGATGCAGCAGTATTTGTCATCTGATTTTTATCAGCGCAGTAACCAGGCAGATCGCATGCAGACGTTGATTTATCAGCGCGCGCAGTTTACGAAAGTGATTGGCATGGATGTCCCCGGCAAAGCGGATGCGCTTGGTTTAGGTTGGGTATATATGGCCCCGAAAGAGGGTCGTCCGGGGATTATTCAGAAGACAGGCGGTGGTGGCGGTTTCATTACCTATATGGCGATGATCCCGCAGAAGAATATTGGCGCGTTTGTGGTGGTCACTCGTTCGCCGTTGACGCGCTTTAAAAATATGAGCGATGGCATCAATGACCTGGTGACCGAGCTAAGCGGGAATAAACCGTTGGTTATCCCCGCGTCCTGA", - "dna_sequence_length": 1158, - "functions": [ - "D-alanyl-D-alanine- carboxypeptidase/endopeptidase", - "penicillin-binding protein", - "weak beta-lactamase" - ], - "id": "CDS_370", - "location": [ - [ - "NC_000913", - 396287, - "-", - 1158 - ] - ], - "md5": "cf60c4d3e606717ad9b570eff3dcf954", - "parent_gene": "", - "protein_md5": "f3778eedc060501efe6cd009804ae842", - "protein_translation": "MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFYGSGATGMALVVIDGNQRVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLDQGTVKLNDPLSKYAPPGARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPTREQRWKYLSTAKLKAAPGSQAAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMKDTTYTPSPDQCRRLMVAERGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQRSNQADRMQTLIYQRAQFTKVIGMDVPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGFITYMAMIPQKNIGAFVVVTRSPLTRFKNMSDGINDLVTELSGNKPLVIPAS", - "protein_translation_length": 385, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128362" - ], - [ - "gene_synonym", - "ECK0372" - ], - [ - "gene_synonym", - "ASAP:ABE-0001297" - ], - [ - "gene_synonym", - "GeneID:946884" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFY6" - ], - [ - "gene_synonym", - "EcoGene:EG10928" - ], - [ - "gene_synonym", - "sbmA" - ], - [ - "gene_synonym", - "b0377" - ], - [ - "gene_synonym", - "NP_414911.1" - ], - [ - "gene_synonym", - "JW0368" - ] - ], - "dna_sequence": "ATGTTTAAGTCTTTTTTCCCAAAGCCGGGAACGTTTTTTCTCTCGGCCTTCGTTTGGGCATTGATTGCCGTTATCTTCTGGCAAGCCGGTGGGGGTGACTGGGTGGCGCGTATCACCGGCGCTTCCGGGCAGATCCCGATTAGCGCCGCGCGTTTCTGGTCGTTGGATTTCCTGATTTTTTACGCTTACTACATTGTTTGCGTAGGACTTTTTGCATTGTTCTGGTTTATCTACAGCCCGCATCGTTGGCAATACTGGTCAATACTCGGTACTGCACTGATCATCTTCGTCACCTGGTTTTTGGTGGAAGTCGGGGTCGCCGTCAACGCCTGGTATGCGCCGTTCTATGATCTGATTCAAACCGCGCTAAGTTCGCCGCATAAAGTCACCATCGAACAATTTTACCGCGAAGTGGGCGTCTTTCTGGGGATTGCGCTGATCGCTGTGGTGATCAGTGTGCTGAACAACTTCTTTGTCAGTCACTACGTGTTCCGCTGGCGTACAGCGATGAACGAATATTACATGGCGAACTGGCAACAACTGCGTCATATCGAAGGGGCCGCACAGCGTGTGCAGGAAGACACCATGCGTTTTGCTTCAACGCTGGAGAATATGGGCGTCAGTTTTATCAACGCCATCATGACGTTGATCGCCTTCCTGCCGGTGCTGGTAACGCTCTCCGCGCATGTGCCGGAGCTGCCGATTATCGGGCACATTCCGTATGGTCTGGTGATTGCCGCAATCGTCTGGTCGCTGATGGGGACCGGATTGCTGGCAGTGGTAGGGATCAAACTGCCGGGGCTGGAGTTTAAAAACCAGCGTGTAGAGGCTGCCTACCGTAAAGAGCTGGTTTATGGTGAAGACGATGCCACGCGCGCGACGCCGCCTACGGTACGCGAGCTGTTTAGCGCCGTACGGAAAAACTATTTCCGCCTCTATTTTCACTATATGTATTTCAACATCGCCCGCATTCTCTATTTGCAGGTCGATAACGTTTTCGGTTTGTTCTTGCTGTTTCCGTCAATTGTTGCCGGTACGATTACGCTCGGCCTGATGACGCAGATTACCAACGTTTTTGGTCAGGTTCGCGGTGCTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAA", - "dna_sequence_length": 1221, - "functions": [ - "peptide antibiotic transporter" - ], - "id": "CDS_371", - "location": [ - [ - "NC_000913", - 396639, - "+", - 1221 - ] - ], - "md5": "6871012f6e4d72a85ba9e594384512e4", - "parent_gene": "", - "protein_md5": "7968d0737be07ef472730ce5231f8e2e", - "protein_translation": "MFKSFFPKPGTFFLSAFVWALIAVIFWQAGGGDWVARITGASGQIPISAARFWSLDFLIFYAYYIVCVGLFALFWFIYSPHRWQYWSILGTALIIFVTWFLVEVGVAVNAWYAPFYDLIQTALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVSHYVFRWRTAMNEYYMANWQQLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLIAFLPVLVTLSAHVPELPIIGHIPYGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVEAAYRKELVYGEDDATRATPPTVRELFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFGLFLLFPSIVAGTITLGLMTQITNVFGQVRGAFQYLINSWTTLVELMSIYKRLRSFEHELDGDKIQEVTHTLS", - "protein_translation_length": 406, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128363" - ], - [ - "gene_synonym", - "ECK0373" - ], - [ - "gene_synonym", - "ASAP:ABE-0001299" - ], - [ - "gene_synonym", - "NP_414912.1" - ], - [ - "gene_synonym", - "b0378" - ], - [ - "gene_synonym", - "GeneID:945038" - ], - [ - "gene_synonym", - "EcoGene:EG13608" - ], - [ - "gene_synonym", - "yaiW" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77562" - ], - [ - "gene_synonym", - "JW0369" - ] - ], - "dna_sequence": "ATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGTTCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAACCGTTGAAAAAGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGATCTCGCCACCACCTTTGAAAGTCAGGGGCTGGCACCGACGCTGGAAAACGTCTGCTCGGTGCTGGCGGTGGCGCAGCAGGAGTCAAATTATCAGGCAGATCCGGCCGTTCCGGGCTTAAGCAAGATCGCCTGGCAAGAGATTGACCGTCGTGCTGAACGGATGCACATTCCTGCTTTTCTGGTTCATACCGCGCTAAAAATCAAATCGCCAAACGGCAAAAGTTATAGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAACATGGTGCCAATGGGGCAGACGCTGTTTGGTTCGCTCAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCATACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTCCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTACTTACCATTTACTGAATTATCCCGCCAGTTATAGCGCACCGATATACCGTTTTGCTGATTTTAACGCTGGCTGGTACGCCAGCCGTAATGCCGCGTTTCAGAACGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTACGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCTGCAAAACTGGGGATGAGCGACAGCGAAATTCGCCGTCAGTTAGAGAAAGGTGACAGCTTCTCTTTTGAGGAGACGGCGCTGTACAAGAAAGTTTATCAACTTGCCGAAACGAAAACGGGTAAATCACTCCCCCGCGAAATGTTGCCTGGCATTCAACTGGAAAGCCCGAAAATCACCCGCAACCTGACTACGGCCTGGTTTGCGAAGCGCGTAGACGAACGGCGGGCGCGTTGTATGAAACAGTGA", 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"gene_synonym", - "b0379" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAP7" - ], - [ - "gene_synonym", - "JW0370" - ], - [ - "gene_synonym", - "ASAP:ABE-0001302" - ], - [ - "gene_synonym", - "yaiY" - ], - [ - "gene_synonym", - "EcoGene:EG14279" - ] - ], - "dna_sequence": "ATGGCTGATTTCACCCTGTCAAAATCGCTGTTTAGCGGAAAATATCGCAATGCCTCTTCAACGCCTGGCAACATTGCCTATGCGTTGTTTGTGCTGTTTTGCTTTTGGGCTGGGGCGCAATTGCTGAACCTGTTAGTGCATGCGCCCGGCGTCTATGAGCGTTTAATGCAGGTCCAGGAAACAGGTCGCCCACGGGTGGAAATTGGTTTAGGTGTCGGCACCATTTTCGGGCTGATCCCGTTTTTAGTAGGCTGCCTCATTTTTGCAGTGGTGGCGCTATGGCTGCACTGGCGACATCGCCGCCAGTAA", - "dna_sequence_length": 309, - "functions": [ - "DUF2755 family inner membrane protein" - ], - "id": "CDS_373", - "location": [ - [ - "NC_000913", - 399333, - "-", - 309 - ] - ], - "md5": "1f6a3b4779b379239a7b85b5e76a4bc0", - "parent_gene": "", - "protein_md5": "7f96e8cdcba5b70264df8173cbad350b", - "protein_translation": "MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNLLVHAPGVYERLMQVQETGRPRVEIGLGVGTIFGLIPFLVGCLIFAVVALWLHWRHRRQ", - "protein_translation_length": 102, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0375" - ], - [ - "gene_synonym", - "JW5053" - ], - [ - "gene_synonym", - "GI:90111125" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAQ0" - ], - [ - "gene_synonym", - "NP_414914.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0001307" - ], - [ - "gene_synonym", - "b0380" - ], - [ - "gene_synonym", - "GeneID:947355" - ], - [ - "gene_synonym", - "yaiZ" - ], - [ - "gene_synonym", - "EcoGene:EG14280" - ] - ], - "dna_sequence": "ATGAATCTGCCTGTAAAAATCCGCCGTGACTGGCACTACTATGCGTTCGCCATTGGCCTTATATTCATTCTTAATGGCGTGGTGGGGTTACTGGGATTTGAAGCAAAAGGTTGGCAGACCTATGCCGTCGGTCTGGTGACGTGGGTGATTAGTTTCTGGCTGGCGGGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAA", - "dna_sequence_length": 213, - "functions": [ - "DUF2754 family putative inner membrane protein" - ], - "id": "CDS_374", - "location": [ - [ - "NC_000913", - 399593, - "+", - 213 - ] - ], - "md5": "51dc23374e5862e8d4d572f756ca490f", - "parent_gene": "", - "protein_md5": "48eca8134a8510ca6323f54c8427d41e", - "protein_translation": "MNLPVKIRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYAVGLVTWVISFWLAGLIIRRRDEETENAQ", - "protein_translation_length": 70, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0376" - ], - [ - "gene_synonym", - "GeneID:945313" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6J8" - ], - [ - "gene_synonym", - "GI:16128366" - ], - [ - "gene_synonym", - "EcoGene:EG10213" - ], - [ - "gene_synonym", - "b0381" - ], - [ - "gene_synonym", - "JW0372" - ], - [ - "gene_synonym", - "ddlA" - ], - [ - "gene_synonym", - "ASAP:ABE-0001309" - ], - [ - "gene_synonym", - "NP_414915.1" - ] - ], - "dna_sequence": "ATGGAAAAACTGCGGGTAGGAATCGTTTTTGGTGGTAAATCAGCGGAACATGAAGTGTCTCTGCAATCGGCAAAAAACATTGTCGATGCCATTGATAAAAGTCGCTTCGACGTTGTGCTGCTGGGCATTGATAAACAAGGGCAATGGCACGTCAGCGATGCCAGCAATTATCTGCTAAATGCAGACGATCCTGCCCATATTGCGTTGCGCCCTTCGGCGACCAGCCTTGCGCAGGTGCCAGGTAAACATGAGCATCAGCTTATCGACGCGCAAAACGGTCAGCCGTTGCCGACGGTGGATGTCATTTTCCCGATTGTCCACGGTACGCTGGGCGAAGATGGTTCCTTGCAGGGAATGCTGCGGGTCGCCAATTTACCGTTTGTAGGTTCTGATGTTCTGGCTTCAGCAGCCTGTATGGACAAAGATGTCACCAAACGTCTGCTACGCGATGCCGGGCTGAACATTGCGCCATTTATTACCCTGACGCGCGCCAATCGTCACAACATTAGTTTTGCCGAAGTGGAGTCTAAACTGGGGTTACCACTGTTTGTAAAACCGGCTAATCAGGGCTCTTCTGTTGGTGTCAGCAAAGTAACCAGTGAAGAACAGTACGCAATTGCCGTCGATCTGGCGTTCGAGTTCGATCATAAAGTGATCGTTGAGCAAGGGATCAAAGGTCGTGAGATCGAATGCGCAGTTCTGGGCAACGACAATCCGCAAGCCAGCACCTGTGGAGAGATCGTACTCACCAGCGATTTCTATGCCTACGACACCAAGTACATTGACGAAGATGGCGCGAAAGTGGTAGTTCCGGCAGCCATTGCGCCAGAAATCAACGATAAGATCCGGGCGATTGCCGTTCAGGCTTATCAAACGTTGGGATGCGCAGGCATGGCGCGTGTAGACGTGTTTTTAACCCCAGAGAACGAAGTGGTGATCAACGAGATCAACACCCTGCCTGGCTTCACTAATATCAGTATGTATCCGAAGCTGTGGCAAGCCAGCGGTCTGGGTTACACCGATCTGATCACACGTTTGATTGAACTGGCGCTGGAGCGTCACGCTGCGGATAACGCATTGAAAACCACAATGTAA", - "dna_sequence_length": 1095, - "functions": [ - "D-alanine-D-alanine ligase A" - ], - "id": "CDS_375", - "location": [ - [ - "NC_000913", - 400923, - "-", - 1095 - ] - ], - "md5": "4e2905bf6715556d6e96563cd3b4bd4f", - "parent_gene": "", - "protein_md5": "da971fe75f46b0e67d0f7a765e069a77", - "protein_translation": "MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGIDKQGQWHVSDASNYLLNADDPAHIALRPSATSLAQVPGKHEHQLIDAQNGQPLPTVDVIFPIVHGTLGEDGSLQGMLRVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKVIVEQGIKGREIECAVLGNDNPQASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAPEINDKIRAIAVQAYQTLGCAGMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQASGLGYTDLITRLIELALERHAADNALKTTM", - "protein_translation_length": 364, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414916.1" - ], - [ - "gene_synonym", - "ECK0377" - ], - [ - "gene_synonym", - "yaiB" - ], - [ - "gene_synonym", - "b0382" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAN9" - ], - [ - "gene_synonym", - "GI:16128367" - ], - [ - "gene_synonym", - "ASAP:ABE-0001313" - ], - [ - "gene_synonym", - "JW0373" - ], - [ - "gene_synonym", - "EcoGene:EG11256" - ], - [ - "gene_synonym", - "iraP" - ], - [ - "gene_synonym", - "GeneID:947709" - ] - ], - "dna_sequence": "ATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGGTTGATTGATCAGGTAGAGGGGGCGCTGTACGAGGTAAAGCCCGATGCCAGCATTCCTGACGACGATACGGAGCTGCTGCGCGATTACGTAAAGAAGTTATTGAAGCATCCTCGTCAGTAA", - "dna_sequence_length": 261, - "functions": [ - "anti-RssB factor, RpoS stabilzer during Pi starvation", - "anti-adapter protein" - ], - "id": "CDS_376", - "location": [ - [ - "NC_000913", - 401386, - "+", - 261 - ] - ], - "md5": "0276b5649c2f6742a7c1d97195843172", - "parent_gene": "", - "protein_md5": "81df583a371326a910430ba1314133b7", - "protein_translation": "MKNLIAELLFKLAQKEEESKELCAQVEALEIIVTAMLRNMAQNDQQRLIDQVEGALYEVKPDASIPDDDTELLRDYVKKLLKHPRQ", - "protein_translation_length": 86, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10727" - ], - [ - "gene_synonym", - "GeneID:945041" - ], - [ - "gene_synonym", - "psiA" - ], - [ - "gene_synonym", - "NP_414917.2" - ], - [ - "gene_synonym", - "phoA" - ], - [ - "gene_synonym", - "JW0374" - ], - [ - "gene_synonym", - "ASAP:ABE-0001328" - ], - [ - "gene_synonym", - "ECK0378" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00634" - ], - [ - "gene_synonym", - "b0383" - ], - [ - "gene_synonym", - "GI:49176017" - ] - ], - "dna_sequence": "GTGAAACAAAGCACTATTGCACTGGCACTCTTACCGTTACTGTTTACCCCTGTGACAAAAGCCCGGACACCAGAAATGCCTGTTCTGGAAAACCGGGCTGCTCAGGGCGATATTACTGCACCCGGCGGTGCTCGCCGTTTAACGGGTGATCAGACTGCCGCTCTGCGTGATTCTCTTAGCGATAAACCTGCAAAAAATATTATTTTGCTGATTGGCGATGGGATGGGGGACTCGGAAATTACTGCCGCACGTAATTATGCCGAAGGTGCGGGCGGCTTTTTTAAAGGTATAGATGCCTTACCGCTTACCGGGCAATACACTCACTATGCGCTGAATAAAAAAACCGGCAAACCGGACTACGTCACCGACTCGGCTGCATCAGCAACCGCCTGGTCAACCGGTGTCAAAACCTATAACGGCGCGCTGGGCGTCGATATTCACGAAAAAGATCACCCAACGATTCTGGAAATGGCAAAAGCCGCAGGTCTGGCGACCGGTAACGTTTCTACCGCAGAGTTGCAGGATGCCACGCCCGCTGCGCTGGTGGCACATGTGACCTCGCGCAAATGCTACGGTCCGAGCGCGACCAGTGAAAAATGTCCGGGTAACGCTCTGGAAAAAGGCGGAAAAGGATCGATTACCGAACAGCTGCTTAACGCTCGTGCCGACGTTACGCTTGGCGGCGGCGCAAAAACCTTTGCTGAAACGGCAACCGCTGGTGAATGGCAGGGAAAAACGCTGCGTGAACAGGCACAGGCGCGTGGTTATCAGTTGGTGAGCGATGCTGCCTCACTGAATTCGGTGACGGAAGCGAATCAGCAAAAACCCCTGCTTGGCCTGTTTGCTGACGGCAATATGCCAGTGCGCTGGCTAGGACCGAAAGCAACGTACCATGGCAATATCGATAAGCCCGCAGTCACCTGTACGCCAAATCCGCAACGTAATGACAGTGTACCAACCCTGGCGCAGATGACCGACAAAGCCATTGAATTGTTGAGTAAAAATGAGAAAGGCTTTTTCCTGCAAGTTGAAGGTGCGTCAATCGATAAACAGGATCATGCTGCGAATCCTTGTGGGCAAATTGGCGAGACGGTCGATCTCGATGAAGCCGTACAACGGGCGCTGGAATTCGCTAAAAAGGAGGGTAACACGCTGGTCATAGTCACCGCTGATCACGCCCACGCCAGCCAGATTGTTGCGCCGGATACCAAAGCTCCGGGCCTCACCCAGGCGCTAAATACCAAAGATGGCGCAGTGATGGTGATGAGTTACGGGAACTCCGAAGAGGATTCACAAGAACATACCGGCAGTCAGTTGCGTATTGCGGCGTATGGCCCGCATGCCGCCAATGTTGTTGGACTGACCGACCAGACCGATCTCTTCTACACCATGAAAGCCGCTCTGGGGCTGAAATAA", 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"gene_synonym", - "b0384" - ], - [ - "gene_synonym", - "GI:162135895" - ], - [ - "gene_synonym", - "NP_414918.4" - ], - [ - "gene_synonym", - "EcoGene:EG11401" - ], - [ - "gene_synonym", - "GeneID:945040" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFM4" - ], - [ - "gene_synonym", - "ASAP:ABE-0001330" - ] - ], - "dna_sequence": "ATGAAAATAACATTACTGGTTACCTTGCTTTTCGGTCTGGTTTTTTTAACCACCGTCGGCGCTGCCGAGAGAACTTTAACCCCACAACAACAGCGTATGACCTCCTGTAATCAGCAGGCGACGGCGCAGGCGTTGAAAGGGGATGCTCGTAAGACCTACATGAGTGATTGCCTGAAGAACAGCAAGTCTGCGCCTGGCGAAAAAAGTTTGACGCCACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGA", - "dna_sequence_length": 321, - "functions": [ - "PsiF family protein" - ], - "id": "CDS_378", - "location": [ - [ - "NC_000913", - 403281, - "+", - 321 - ] - ], - "md5": "ecd1c3d555c39bce33b1ccd75156b33a", - "parent_gene": "", - "protein_md5": "e39c02ac664f7b5e0d8ab20af3741469", - "protein_translation": "MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQALKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACLKKAA", - "protein_translation_length": 106, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yaiC" - ], - [ - "gene_synonym", - "NP_414919.1" - ], - [ - "gene_synonym", - "ECK0380" - ], - [ - "gene_synonym", - "GeneID:945037" - ], - [ - "gene_synonym", - "adrA" - ], - [ - "gene_synonym", - "b0385" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAP1" - ], - [ - "gene_synonym", - "JW0376" - ], - [ - "gene_synonym", - "EcoGene:EG11257" - ], - [ - "gene_synonym", - "ASAP:ABE-0001336" - ], - [ - "gene_synonym", - "GI:16128370" - ] - ], - "dna_sequence": "ATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTAACTCCTCAAAACGAACATCAGCGGTCCGGGCTGCGCTTCGCCCGTCGCGTCAGACTACCCCGTGCGGTTGGCCTGGCTGGCATGTTCTTACCGATTGCTTCAACGCTGGTTTCACACCCGCCGCCGGGCTGGTGGTGGCTGGTGTTGGTCGGCTGGGCGTTCGTCTGGCCGCATTTAGCCTGGCAGATAGCGAGCAGGGCCGTCGATCCGCTTAGCCGGGAAATTTACAACTTAAAAACCGATGCAGTATTAGCGGGAATGTGGGTAGGCGTAATGGGCGTAAACGTGCTGCCTTCCACCGCGATGTTGATGATTATGTGTCTGAATTTGATGGGGGCAGGCGGCCCCCGTCTGTTTGTCGCGGGTCTGGTGTTGATGGTGGTTTCCTGCCTTGTCACCCTCGAGCTGACGGGCATTACCGTGTCGTTCAATAGTGCGCCGCTGGAATGGTGGCTCTCCCTTCCCATTATTGTCATTTATCCTCTGCTGTTTGGCTGGGTCAGCTACCAGACGGCAACCAAACTGGCGGAACATAAACGCAGGTTGCAGGTCATGAGTACCCGCGACGGCATGACGGGCGTGTATAACCGACGTCATTGGGAAACTATGTTACGCAATGAATTTGATAACTGTCGGCGGCATAATCGCGATGCAACGTTACTGATTATCGATATCGACCATTTCAAGAGCATCAACGATACCTGGGGCCATGATGTGGGCGATGAAGCGATTGTGGCGCTTACCCGACAGTTACAAATTACCCTGCGCGGTAGCGATGTGATTGGTCGGTTTGGCGGCGATGAGTTTGCAGTAATCATGTCCGGTACGCCAGCTGAGAGCGCCATTACCGCCATGTTACGGGTGCATGAAGGGCTAAATACATTACGTTTGCCGAATACGCCACAGGTAACTTTACGGATTAGTGTGGGGGTTGCGCCGCTGAACCCACAAATGAGTCACTATCGTGAGTGGTTGAAATCGGCAGATTTGGCGCTTTACAAAGCAAAGAAAGCCGGACGTAACCGCACCGAAGTGGCGGCCTGA", 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"gene_synonym", - "b0386" - ], - [ - "gene_synonym", - "ASAP:ABE-0001338" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9L8" - ], - [ - "gene_synonym", - "proC" - ], - [ - "gene_synonym", - "ECK0381" - ], - [ - "gene_synonym", - "GeneID:945034" - ], - [ - "gene_synonym", - "NP_414920.1" - ] - ], - "dna_sequence": "ATGGAAAAGAAAATCGGTTTTATTGGCTGCGGCAATATGGGAAAAGCCATTCTCGGCGGTCTGATTGCCAGCGGTCAGGTGCTTCCAGGGCAAATCTGGGTATACACCCCCTCCCCGGATAAAGTCGCCGCCCTGCATGACCAGTTCGGCATCAACGCCGCAGAATCGGCGCAAGAAGTGGCGCAAATCGCCGACATCATTTTTGCTGCCGTTAAACCTGGCATCATGATTAAAGTGCTTAGCGAAATCACCTCCAGCCTGAATAAAGACTCTCTGGTCGTTTCTATTGCTGCAGGTGTCACGCTCGACCAGCTTGCCCGCGCGCTGGGCCATGACCGGAAAATTATCCGCGCCATGCCGAACACTCCCGCACTGGTTAATGCCGGGATGACCTCCGTAACGCCAAACGCGCTGGTAACCCCAGAAGATACCGCTGATGTGCTGAATATTTTCCGCTGCTTTGGCGAAGCGGAAGTAATTGCTGAGCCGATGATCCACCCGGTGGTCGGTGTGAGCGGTTCTTCGCCAGCCTACGTATTTATGTTTATCGAAGCGATGGCCGACGCCGCCGTGCTGGGCGGGATGCCACGCGCCCAGGCGTATAAATTTGCCGCTCAGGCGGTAATGGGTTCCGCAAAAATGGTGCTGGAAACGGGAGAACATCCGGGGGCACTGAAAGATATGGTCTGCTCACCGGGAGGCACCACCATTGAAGCGGTACGCGTACTGGAAGAGAAAGGCTTCCGTGCTGCAGTGATCGAAGCGATGACGAAGTGTATGGAAAAATCAGAAAAACTCAGCAAATCCTGA", - "dna_sequence_length": 810, - "functions": [ - "pyrroline-5-carboxylate reductase, NAD(P)-binding" - ], - "id": "CDS_380", - "location": [ - [ - "NC_000913", - 405644, - "-", - 810 - ] - ], - "md5": "1841b75453b82c3a3a8b015f4c4df6b9", - "parent_gene": "", - "protein_md5": "ad28a8bffcd43132168d795293745983", - "protein_translation": "MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS", - "protein_translation_length": 269, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13176" - ], - [ - "gene_synonym", - "yaiI" - ], - [ - "gene_synonym", - "ECK0382" - ], - [ - "gene_synonym", - "GI:90111127" - ], - [ - "gene_synonym", - "ASAP:ABE-0001344" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8D3" - ], - [ - "gene_synonym", - "NP_414921.2" - ], - [ - "gene_synonym", - "b0387" - ], - [ - "gene_synonym", - "GeneID:945033" - ], - [ - "gene_synonym", - "JW0378" - ] - ], - "dna_sequence": "ATGACAATTTGGGTGGATGCCGACGCGTGTCCCAATGTAATTAAAGAGATTTTGTATCGCGCGGCGGAACGTATGCAGATGCCGCTGGTACTGGTAGCAAACCAGAGTTTACGCGTGCCGCCATCGCGATTTATTCGTACGCTGCGCGTCGCGGCAGGTTTCGACGTTGCCGATAACGAAATTGTCCGGCAGTGTGAAGCGGGCGATTTGGTGATCACCGCAGATATACCTTTGGCTGCTGAAGCCATCGAGAAAGGCGCTGCGGCGCTTAATCCGCGCGGCGAACGTTACACGCCAGCGACCATTCGTGAGCGCCTGACGATGCGCGATTTTATGGATACCTTACGTGCCAGTGGGATCCAGACCGGCGGACCAGATAGCCTTTCACAACGTGACCGCCAGGCCTTTGCCGCGGAGCTGGAGAAGTGGTGGCTGGAAGTGCAACGTAGTCGTGGCTAA", - "dna_sequence_length": 459, - "functions": [ - "UPF0178 family protein" - ], - "id": "CDS_381", - "location": [ - [ - "NC_000913", - 405764, - "+", - 459 - ] - ], - "md5": "c50230092baffba5a8eaecf07d3d7bad", - "parent_gene": "", - "protein_md5": "2990862072e39b1733ed4503093023ad", - "protein_translation": "MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG", - "protein_translation_length": 152, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128373" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6E1" - ], - [ - "gene_synonym", - "EcoGene:EG10082" - ], - [ - "gene_synonym", - "ECK0383" - ], - [ - "gene_synonym", - "JW0379" - ], - [ - "gene_synonym", - "NP_414922.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001353" - ], - [ - "gene_synonym", - "aroL" - ], - [ - "gene_synonym", - "GeneID:945031" - ], - [ - "gene_synonym", - "b0388" - ] - ], - "dna_sequence": "ATGACACAACCTCTTTTTCTGATCGGGCCTCGGGGCTGTGGTAAAACAACGGTCGGAATGGCCCTTGCCGATTCGCTTAACCGTCGGTTTGTCGATACCGATCAGTGGTTGCAATCACAGCTCAATATGACGGTCGCGGAGATCGTCGAAAGGGAAGAGTGGGCGGGATTTCGCGCCAGAGAAACGGCGGCGCTGGAAGCGGTAACTGCGCCATCCACCGTTATCGCTACAGGCGGCGGCATTATTCTGACGGAATTTAATCGTCACTTCATGCAAAATAACGGGATCGTGGTTTATTTGTGTGCGCCAGTATCAGTCCTGGTTAACCGACTGCAAGCTGCACCGGAAGAAGATTTACGGCCAACCTTAACGGGAAAACCGCTGAGCGAAGAAGTTCAGGAAGTGCTGGAAGAACGCGATGCGCTATATCGCGAAGTTGCGCATATTATCATCGACGCAACAAACGAACCCAGCCAGGTGATTTCTGAAATTCGCAGCGCCCTGGCACAGACGATCAATTGTTGA", - 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"gene_synonym", - "EcoGene:EG10083" - ], - [ - "gene_synonym", - "NP_414924.1" - ], - [ - "gene_synonym", - "aroM" - ] - ], - "dna_sequence": "ATGAGTGCGTCGTTGGCGATCCTGACCATCGGCATTGTACCTATGCAGGAAGTTTTGCCGCTCCTGACGGAATACATTGACGAAGATAATATTTCCCATCATAGCCTGCTGGGGAAGTTAAGTCGTGAAGAAGTGATGGCGGAGTACGCGCCAGAAGCAGGCGAAGACACCATTCTCACATTATTAAATGACAACCAGCTGGCCCATGTTTCGCGTCGCAAAGTGGAGCGTGACCTGCAAGGTGTGGTTGAAGTGCTCGATAATCAGGGTTATGACGTCATTTTATTAATGAGTACAGCAAACATTAGTAGTATGACTGCGCGTAATACGATCTTTCTTGAGCCGTCGCGAATATTGCCTCCACTGGTTTCCTCTATTGTTGAAGATCATCAGGTGGGGGTTATCGTTCCGGTTGAGGAGATGCTGCCCGTTCAGGCGCAAAAATGGCAAATTTTGCAGAAATCGCCGGTATTTTCATTGGGTAACCCCATTCATGATTCAGAACAAAAAATCATTGATGCCGGGAAAGAATTACTGGCAAAAGGGGCTGATGTCATCATGCTGGATTGTTTAGGATTTCACCAACGTCATCGCGATTTACTGCAAAAACAGCTCGATGTTCCTGTCTTGCTGTCTAACGTATTGATTGCACGGCTGGCTGCGGAATTACTGGTGTAA", - "dna_sequence_length": 678, - "functions": [ - "AroM family protein" - ], - "id": "CDS_384", - "location": [ - [ - "NC_000913", - 407428, - "+", - 678 - ] - ], - "md5": 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"ATGCTTCAAAGTAATGAGTACTTTTCCGGCAAAGTGAAATCAATCGGCTTTTCCAGCAGCAGCACTGGTCGCGCCAGCGTGGGTGTTATGGTTGAAGGCGAATACACCTTCAGCACCGCTGAGCCGGAAGAGATGACGGTAATCAGTGGCGCGCTGAATGTGTTACTGCCTGACGCGACCGACTGGCAGGTGTATGAAGCCGGTTCGGTGTTTAATGTTCCCGGTCACAGTGAGTTTCATCTGCAAGTTGCCGAACCCACCTCTTATCTGTGCCGCTATCTGTAA", - "dna_sequence_length": 285, - "functions": [ - "UPF0345 family protein" - ], - "id": "CDS_385", - "location": [ - [ - "NC_000913", - 408177, - "+", - 285 - ] - ], - "md5": "52e805a0a5885ed77b3dd71c5d27e814", - "parent_gene": "", - "protein_md5": "2803dfeb0ae7ed649845703d52f5fbb8", - "protein_translation": "MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEEMTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL", - "protein_translation_length": 94, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0392" - ], - [ - "gene_synonym", - "ECK0387" - ], - [ - "gene_synonym", - "ASAP:ABE-0001363" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75704" - ], - [ - "gene_synonym", - "GeneID:945423" - ], 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"gene_synonym", - "yaiD" - ], - [ - "gene_synonym", - "b0393" - ], - [ - "gene_synonym", - "GeneID:948585" - ], - [ - "gene_synonym", - "GI:16128378" - ], - [ - "gene_synonym", - "NP_414927.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001366" - ], - [ - "gene_synonym", - "rdgC" - ], - [ - "gene_synonym", - "JW0384" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36767" - ], - [ - "gene_synonym", - "EcoGene:EG12158" - ] - ], - "dna_sequence": "ATGCTGTGGTTCAAAAATTTAATGGTTTACCGTCTTAGCCGCGAGATTTCGCTGCGTGCAGAAGAGATGGAAAAACAGCTAGCCTCGATGGCATTTACCCCATGCGGCAGCCAGGACATGGCGAAGATGGGCTGGGTTCCTCCGATGGGATCGCACAGCGATGCGTTAACGCACGTTGCCAATGGTCAAATTGTTATCTGCGCGCGCAAAGAAGAAAAAATCCTCCCGTCTCCGGTGATTAAACAGGCGCTGGAAGCGAAAATCGCCAAACTGGAAGCGGAACAGGCGCGTAAGCTGAAGAAAACCGAAAAAGATTCGCTGAAAGACGAAGTGCTGCACTCTCTGCTGCCGCGTGCTTTCAGCCGTTTTAGCCAGACAATGATGTGGATCGACACGGTTAACGGTTTGATTATGGTGGACTGCGCCAGTGCCAAAAAAGCGGAAGATACGCTGGCATTACTGCGTAAAAGCCTGGGGTCGTTACCGGTTGTACCATTGAGCATGGAAAACCCGATTGAACTGACGCTGACCGAATGGGTTCGCTCCGGTAGTGCGGCACAGGGCTTCCAGCTGCTTGATGAAGCCGAGCTGAAATCGTTGCTGGAAGATGGCGGCGTGATCCGCGCGAAGAAACAAGATCTGACCAGCGAAGAGATCACCAATCACATTGAAGCCGGAAAAGTGGTGACTAAACTGGCGCTCGACTGGCAGCAGCGCATTCAGTTTGTGATGTGCGACGATGGTTCGCTCAAGCGTCTGAAGTTCTGCGACGAGCTGCGCGATCAAAACGAAGATATCGACCGTGAAGATTTCGCCCAGCGTTTTGATGCCGATTTCATCCTGATGACTGGTGAACTGGCAGCGTTAATTCAAAACCTGATTGAAGGATTAGGTGGCGAAGCACAACGTTAA", - "dna_sequence_length": 912, - "functions": [ - "nucleoid-associated ssDNA and dsDNA binding protein", - "competitive inhibitor of RecA function" - ], - "id": "CDS_387", - "location": [ - [ - "NC_000913", - 410019, - "-", - 912 - ] - ], - "md5": "e1a2bc40bf41cd0f0e210852219b7cde", - "parent_gene": "", - "protein_md5": "cac643010e273e86918ad3bb0a83df4c", - "protein_translation": "MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGEAQR", - "protein_translation_length": 303, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0389" - ], - [ - "gene_synonym", - "NP_414928.2" - ], - [ - "gene_synonym", - "GeneID:949086" - ], - [ - "gene_synonym", - "GI:90111128" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23917" - ], - [ - "gene_synonym", - "b0394" - ], - [ - "gene_synonym", - "EcoGene:EG11288" - ], - [ - "gene_synonym", - "ASAP:ABE-0001372" - ], - [ - "gene_synonym", - "JW0385" - ], - [ - "gene_synonym", - "mak" - ], - [ - "gene_synonym", - "yajF" - ] - ], - "dna_sequence": "GTGCGTATAGGTATCGATTTAGGCGGCACCAAAACTGAAGTGATTGCACTGGGCGATGCAGGGGAGCAGTTGTACCGCCATCGTCTGCCCACGCCGCGTGATGATTACCGGCAGACTATTGAAACGATCGCCACGTTGGTTGATATGGCGGAGCAGGCGACGGGGCAGCGCGGAACGGTAGGTATGGGCATTCCTGGCTCAATTTCGCCTTACACCGGTGTGGTGAAGAATGCCAATTCAACCTGGCTCAACGGTCAGCCATTCGATAAAGACTTAAGCGCGAGGTTGCAGCGGGAAGTGCGGCTGGCAAATGACGCTAACTGTCTGGCGGTTTCAGAAGCAGTAGATGGCGCGGCAGCGGGAGCGCAGACGGTATTTGCCGTGATTATCGGCACGGGATGCGGCGCGGGCGTGGCATTCAATGGGCGGGCGCATATCGGCGGCAATGGCACGGCAGGTGAGTGGGGACACAATCCGCTACCGTGGATGGACGAAGACGAACTGCGTTATCGCGAGGAAGTCCCTTGTTATTGCGGTAAACAAGGTTGTATTGAAACCTTTATTTCGGGCACGGGATTCGCGATGGATTATCGTCGTTTGAGCGGACATGCGCTGAAAGGCAGTGAAATTATCCGCCTGGTTGAAGAAAGCGATCCGGTAGCGGAACTGGCATTGCGTCGCTACGAGCTGCGGCTGGCAAAATCGCTGGCACATGTCGTGAATATTCTCGATCCGGATGTGATTGTCCTGGGGGGCGGGATGAGCAATGTAGACCGTTTATATCAAACGGTTGGGCAGTTGATTAAACAATTTGTCTTCGGCGGCGAATGTGAAACGCCGGTGCGTAAGGCGAAGCACGGTGATTCCAGCGGCGTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAA", - "dna_sequence_length": 909, - "functions": [ - "manno(fructo)kinase" - ], - "id": 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"gene_synonym", - "GeneID:949077" - ] - ], - "dna_sequence": "ATGAAAAAAGTCATTTTATCTTTGGCTCTGGGCACGTTTGGTTTGGGGATGGCCGAATTTGGCATTATGGGCGTGCTCACGGAGCTGGCGCATAACGTAGGAATTTCGATTCCTGCCGCCGGGCATATGATCTCGTATTATGCACTGGGGGTGGTGGTCGGTGCGCCAATCATCGCACTCTTTTCCAGCCGCTACTCACTCAAACATATCTTGTTGTTTCTGGTGGCGTTGTGCGTCATTGGCAACGCCATGTTCACGCTCTCTTCGTCTTACCTGATGCTCGCCATTGGTCGGCTGGTATCCGGCTTTCCGCATGGCGCATTTTTTGGCGTCGGAGCGATCGTGTTATCAAAAATTATCAAACCCGGAAAAGTCACCGCCGCCGTGGCGGGGATGGTTTCCGGGATGACAGTCGCCAATTTGCTGGGCATTCCGCTGGGAACGTATTTAAGTCAGGAATTTAGCTGGCGTTACACCTTTTTATTGATCGCTGTTTTTAATATTGCGGTGATGGCATCGGTCTATTTTTGGGTGCCAGATATTCGCGACGAGGCGAAAGGAAATCTGCGCGAACAATTTCACTTTTTGCGCAGCCCGGCCCCGTGGTTAATTTTCGCCGCCACGATGTTTGGCAACGCAGGTGTGTTTGCCTGGTTCAGCTACGTAAAGCCATACATGATGTTTATTTCCGGTTTTTCGGAAACGGCGATGACCTTTATTATGATGTTAGTTGGGCTAGGGATGGTGCTGGGAAATATGCTAAGTGGCAGGATTTCAGGACGTTATTCACCACTGCGCATTGCAGCAGTGACTGACTTTATAATTGTACTGGCACTGCTGATGCTCTTTTTCTGCGGCGGCATGAAAACAACGTCGCTTATTTTTGCTTTTATTTGTTGCGCGGGATTATTTGCCCTTTCAGCACCGCTACAAATATTGTTACTACAAAACGCCAAAGGCGGAGAGTTATTAGGTGCCGCAGGTGGGCAAATAGCGTTTAACCTCGGTAGCGCCGTCGGCGCATATTGCGGAGGTATGATGCTGACGCTGGGGCTGGCATATAATTACGTGGCGCTGCCTGCCGCCCTGCTTTCGTTTGCTGCGATGTCGTCGTTGCTGCTGTATGGTCGCTATAAGCGCCAGCAAGCGGCGGATACTCCGGTGCTGGCGAAACCACTGGGGTAG", 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- "gene_synonym", - "NP_414931.1" - ], - [ - "gene_synonym", - "sbcC" - ], - [ - "gene_synonym", - "GeneID:949076" - ], - [ - "gene_synonym", - "ECK0391" - ], - [ - "gene_synonym", - "GI:16128382" - ], - [ - "gene_synonym", - "JW0387" - ], - [ - "gene_synonym", - "ASAP:ABE-0001381" - ] - ], - "dna_sequence": "ATGAAAATTCTCAGCCTGCGCCTGAAAAACCTGAACTCATTAAAAGGCGAATGGAAGATTGATTTCACCCGCGAGCCGTTCGCCAGCAACGGGCTGTTTGCTATTACCGGCCCAACAGGTGCGGGGAAAACCACCCTGCTGGACGCCATTTGTCTGGCGCTGTATCACGAAACTCCGCGTCTCTCTAACGTTTCACAATCGCAAAATGATCTCATGACCCGCGATACCGCCGAATGTCTGGCGGAGGTGGAGTTTGAAGTGAAAGGTGAAGCGTACCGTGCATTCTGGAGCCAGAATCGGGCGCGTAACCAACCCGACGGTAATTTGCAGGTGCCACGCGTAGAGCTGGCGCGCTGCGCCGACGGCAAAATTCTCGCCGACAAAGTGAAAGATAAGCTGGAACTGACAGCGACGTTAACCGGGCTGGATTACGGGCGCTTCACCCGTTCGATGCTGCTTTCGCAGGGGCAATTTGCTGCCTTCCTGAATGCCAAACCCAAAGAACGCGCGGAATTGCTCGAGGAGTTAACCGGCACTGAAATCTACGGGCAAATCTCGGCGATGGTTTTTGAGCAGCACAAATCGGCCCGCACAGAGCTGGAGAAGCTGCAAGCGCAGGCCAGCGGCGTCACGTTGCTCACGCCGGAACAAGTGCAATCGCTGACAGCGAGTTTGCAGGTACTTACTGACGAAGAAAAACAGTTAATTACCGCGCAGCAGCAAGAACAACAATCGCTAAACTGGTTAACGCGTCAGGACGAATTGCAGCAAGAAGCCAGCCGCCGTCAGCAGGCCTTGCAACAGGCGTTAGCCGAAGAAGAAAAAGCGCAACCTCAACTGGCGGCGCTTAGTCTGGCACAACCGGCACGAAATCTTCGTCCACACTGGGAACGCATCGCAGAACACAGCGCGGCGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGCATTCGCCACCACGCGGCGAAGCAGTCAGCAGAATTACAGCAGCAGCAACAAAGCCTGAATACCTGGTTACAGGAACACGACCGCTTCCGTCAGTGGAACAACGAACCGGCGGGTTGGCGTGCGCAGTTCTCCCAACAAACCAGCGATCGCGAGCATCTGCGGCAATGGCAGCAACAGTTAACCCATGCTGAGCAAAAACTTAATGCGCTTGCGGCGATCACGTTGACGTTAACCGCCGATGAAGTTGCTACCGCCCTGGCGCAACATGCTGAGCAACGCCCACTGCGTCAGCACCTGGTCGCGCTGCATGGACAGATTGTTCCCCAACAAAAACGTCTGGCGCAGTTACAGGTCGCTATCCAGAATGTCACGCAAGAACAGACGCAACGTAACGCCGCACTTAACGAAATGCGCCAGCGTTATAAAGAAAAGACGCAGCAACTTGCCGATGTGAAAACCATTTGCGAGCAGGAAGCGCGCATCAAAACGCTGGAAGCTCAACGTGCACAGTTACAGGCGGGTCAGCCTTGCCCACTTTGTGGTTCCACCAGCCACCCGGCGGTCGAGGCGTATCAGGCGCTGGAGCCTGGCGTTAATCAGTCTCGATTACTGGCGCTGGAAAACGAAGTTAAAAAGCTCGGTGAAGAAGGTGCGACGCTACGTGGGCAACTGGACGCCATAACAAAGCAGCTTCAGCGTGATGAAAACGAAGCGCAAAGCCTCCGACAAGATGAGCAAGCACTTACTCAACAATGGCAAGCCGTCACGGCCAGCCTCAATATCACCTTGCAGCCACTGGACGATATTCAACCGTGGCTGGATGCACAAGATGAGCACGAACGCCAGCTGCGGTTACTCAGCCAACGGCATGAATTACAAGGGCAGATTGCCGCGCATAATCAGCAAATTATCCAGTATCAACAGCAAATTGAACAACGCCAGCAACTACTTTTAACGACATTGACGGGTTATGCACTGACATTGCCACAGGAAGATGAAGAAGAGAGCTGGTTGGCGACACGTCAGCAAGAAGCGCAGAGCTGGCAGCAACGCCAGAACGAATTAACCGCGCTGCAAAACCGTATTCAGCAGCTGACGCCGATTCTGGAAACGTTGCCGCAAAGTGATGAACTCCCGCACTGCGAAGAAACTGTGGTATTGGAAAACTGGCGGCAGGTACATGAACAATGTCTCGCATTACACAGCCAGCAGCAGACGTTACAGCAACAGGATGTTCTGGCGGCGCAAAGTCTGCAAAAAGCCCAGGCGCAGTTTGACACCGCGCTACAGGCCAGCGTCTTTGACGATCAGCAGGCGTTCCTTGCGGCGCTAATGGATGAACAAACACTAACGCAGCTGGAACAGCTCAAGCAGAATCTGGAAAACCAGCGCCGTCAGGCGCAAACTCTGGTCACTCAGACAGCAGAAACGCTGGCACAGCATCAACAACACCGACCTGACGACGGGTTGGCTCTCACTGTGACGGTGGAGCAGATTCAGCAAGAGTTAGCGCAAACTCACCAAAAGTTGCGTGAAAACACCACGAGTCAAGGCGAGATTCGCCAGCAGCTGAAGCAGGATGCAGATAACCGTCAGCAACAACAAACCTTAATGCAGCAAATTGCTCAAATGACGCAGCAGGTTGAGGACTGGGGATATCTGAATTCGCTAATAGGTTCCAAAGAGGGCGATAAATTCCGCAAGTTTGCCCAGGGGCTGACGCTGGATAATTTAGTCCATCTCGCTAATCAGCAACTTACCCGGCTGCACGGGCGCTATCTGTTACAGCGCAAAGCCAGCGAGGCGCTGGAAGTCGAGGTTGTTGATACCTGGCAGGCAGATGCGGTACGCGATACCCGTACCCTTTCCGGCGGCGAAAGTTTCCTCGTTAGTCTGGCGCTGGCGCTGGCGCTTTCGGATCTGGTCAGCCATAAAACACGTATTGACTCGCTGTTCCTTGATGAAGGTTTTGGCACGCTGGATAGCGAAACGCTGGATACCGCCCTTGATGCGCTGGATGCCCTGAACGCCAGTGGCAAAACCATCGGTGTGATTAGCCACGTAGAAGCGATGAAAGAGCGTATTCCGGTGCAGATCAAAGTGAAAAAGATCAACGGCCTGGGCTACAGCAAACTGGAAAGTACGTTTGCAGTGAAATAA", - "dna_sequence_length": 3147, - "functions": [ - "exonuclease, dsDNA, ATP-dependent" - ], - "id": "CDS_390", - "location": [ - [ - "NC_000913", - 415753, - "-", - 3147 - ] - ], - "md5": "e5d9635b4cbc529199cb4a35840d17f5", - "parent_gene": "", - "protein_md5": "3b76eedb8f516a62131d230ebc79083e", - "protein_translation": "MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK", - "protein_translation_length": 1048, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0398" - ], - [ - "gene_synonym", - "ECK0392" - ], - [ - "gene_synonym", - "GI:16128383" - ], - [ - "gene_synonym", - "NP_414932.1" - ], - [ - "gene_synonym", - "JW0388" - ], - [ - "gene_synonym", - "sbcD" - ], - [ - "gene_synonym", - "yajA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG76" - ], - [ - "gene_synonym", - "EcoGene:EG11094" - ], - [ - "gene_synonym", - "GeneID:945049" - ], - [ - "gene_synonym", - "ASAP:ABE-0001383" - ] - ], - "dna_sequence": "ATGCGCATCCTTCACACCTCAGACTGGCATCTCGGCCAGAACTTCTACAGTAAAAGCCGCGAAGCTGAACATCAGGCTTTTCTTGACTGGCTGCTGGAGACAGCACAAACCCATCAGGTGGATGCGATTATTGTTGCCGGTGATGTTTTCGATACCGGCTCGCCGCCCAGTTACGCCCGCACGTTATACAACCGTTTTGTTGTCAATTTACAGCAAACTGGCTGTCATCTGGTGGTACTGGCAGGAAACCATGACTCGGTCGCCACGCTGAATGAATCGCGCGATATCATGGCGTTCCTCAATACTACCGTGGTCGCCAGCGCCGGACATGCGCCGCAAATCTTGCCTCGTCGCGACGGGACGCCAGGCGCAGTGCTGTGCCCCATTCCGTTTTTACGTCCGCGTGACATTATTACCAGCCAGGCGGGGCTTAACGGTATTGAAAAACAGCAGCATTTACTGGCAGCGATTACCGATTATTACCAACAACACTATGCCGATGCCTGCAAACTGCGCGGCGATCAGCCTCTGCCCATCATCGCCACGGGACATTTAACGACCGTGGGGGCCAGTAAAAGTGACGCCGTGCGTGACATTTATATTGGCACGCTGGACGCGTTTCCGGCACAAAACTTTCCACCAGCCGACTACATCGCGCTCGGGCATATTCACCGCGCACAGATTATTGGCGGCATGGAACATGTTCGCTATTGCGGCTCCCCCATTCCACTGAGTTTTGATGAATGCGGTAAGAGTAAATATGTCCATCTGGTGACATTTTCAAACGGCAAATTAGAGAGCGTGGAAAACCTGAACGTACCGGTAACGCAACCCATGGCAGTGCTGAAAGGCGATCTGGCGTCGATTACCGCACAGCTGGAACAGTGGCGCGATGTATCGCAGGAGCCACCTGTCTGGCTGGATATCGAAATCACTACTGATGAGTATCTGCATGATATTCAGCGCAAAATCCAGGCATTAACCGAATCATTGCCTGTCGAAGTATTGCTGGTACGTCGGAGTCGTGAACAGCGCGAGCGTGTGTTAGCCAGCCAACAGCGTGAAACCCTCAGCGAACTCAGCGTCGAAGAGGTGTTCAATCGCCGTCTGGCACTGGAAGAACTGGATGAATCGCAGCAGCAACGTCTGCAGCATCTTTTCACCACGACGTTGCATACCCTCGCCGGAGAACACGAAGCATGA", - "dna_sequence_length": 1203, - "functions": [ - "exonuclease, dsDNA, ATP-dependent" - ], - "id": "CDS_391", - "location": [ - [ - "NC_000913", - 416952, - "-", - 1203 - ] - ], - "md5": "7248df543e24a698edbecd69ef08b9cc", - "parent_gene": "", - "protein_md5": "2484503ea26833aba591bd8c06223adb", - "protein_translation": "MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA", - "protein_translation_length": 400, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0399" - ], - [ - "gene_synonym", - "GeneID:945046" - ], - [ - "gene_synonym", - "GI:16128384" - ], - [ - "gene_synonym", - "ECK0393" - ], - [ - "gene_synonym", - "phoB" - ], - [ - "gene_synonym", - "JW0389" - ], - [ - "gene_synonym", - "phoRc" - ], - [ - "gene_synonym", - "ASAP:ABE-0001389" - ], - [ - "gene_synonym", - "EcoGene:EG10728" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFJ5" - ], - [ - "gene_synonym", - "NP_414933.1" - ] - ], - "dna_sequence": "ATGGCGAGACGTATTCTGGTCGTAGAAGATGAAGCTCCAATTCGCGAAATGGTCTGCTTCGTGCTCGAACAAAATGGCTTTCAGCCGGTCGAAGCGGAAGATTATGACAGTGCTGTGAATCAACTGAATGAACCCTGGCCGGATTTAATTCTCCTCGACTGGATGTTACCTGGCGGCTCCGGTATCCAGTTCATCAAACACCTCAAGCGCGAGTCGATGACCCGGGATATTCCAGTGGTGATGTTGACCGCCAGAGGGGAAGAAGAAGATCGCGTGCGCGGCCTTGAAACCGGCGCGGATGACTATATCACCAAGCCGTTTTCGCCGAAGGAGCTGGTGGCGCGAATCAAAGCGGTAATGCGCCGTATTTCGCCAATGGCGGTGGAAGAGGTGATTGAGATGCAGGGATTAAGTCTCGACCCGACATCTCACCGAGTGATGGCGGGCGAAGAGCCGCTGGAGATGGGGCCGACAGAATTTAAACTGCTGCACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGATATCGTTTTTCAACCCGCTTTTAA", - "dna_sequence_length": 690, - "functions": [ - "response regulator in two-component regulatory system with PhoR" - ], - "id": "CDS_392", - "location": [ - [ - "NC_000913", - 417142, - "+", - 690 - ] - ], - "md5": "f45ed64686f854e8ab7c4d437b6ebeaf", - "parent_gene": "", - "protein_md5": "0e45b31dbd48b4685a1831b0524fc60d", - "protein_translation": "MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFSTRF", - "protein_translation_length": 229, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "phoR1" - ], - [ - "gene_synonym", - "phoR" - ], - [ - "gene_synonym", - "GeneID:945044" - ], - [ - "gene_synonym", - "nmpB" - ], - [ - "gene_synonym", - "GI:16128385" - ], - [ - "gene_synonym", - "ECK0394" - ], - [ - "gene_synonym", - "EcoGene:EG10733" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08400" - ], - [ - "gene_synonym", - "b0400" - ], - [ - "gene_synonym", - "JW0390" - ], - [ - "gene_synonym", - "NP_414934.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001391" - ], - [ - "gene_synonym", - "R1pho" - ] - ], - "dna_sequence": "GTGCTGGAACGGCTGTCGTGGAAAAGGCTGGTGCTGGAGCTGCTACTTTGCTGCCTCCCGGCTTTCATCCTGGGTGCATTTTTTGGTTACCTGCCCTGGTTTTTGCTGGCATCGGTAACAGGACTGCTTATCTGGCATTTCTGGAATTTATTGCGCCTTTCATGGTGGCTGTGGGTGGATCGCAGTATGACCCCGCCACCGGGGCGTGGTAGCTGGGAACCGCTACTATACGGCTTACACCAGATGCAGCTGCGAAATAAAAAACGCCGCCGTGAACTGGGCAATCTGATTAAACGCTTTCGTAGCGGCGCGGAGTCGCTGCCCGACGCGGTGGTGCTGACCACGGAAGAGGGCGGTATTTTCTGGTGTAACGGTCTGGCGCAACAAATTCTTGGTTTGCGCTGGCCGGAAGATAACGGGCAGAACATCCTTAACCTACTGCGTTACCCGGAGTTTACGCAATATCTGAAAACGCGTGATTTTTCTCGCCCGCTCAATCTGGTGCTCAACACCGGGCGGCATCTGGAAATTCGCGTCATGCCTTATACCCACAAACAGTTGCTGATGGTGGCGCGTGATGTCACGCAAATGCATCAACTGGAAGGGGCGCGGCGTAACTTTTTTGCCAACGTGAGCCATGAGTTACGTACGCCATTGACCGTGTTACAGGGTTACCTGGAGATGATGAATGAGCAGCCGCTGGAAGGCGCGGTACGCGAAAAAGCGTTGCACACCATGCGCGAGCAGACCCAGCGGATGGAAGGACTGGTGAAGCAATTGCTGACGCTGTCGAAAATAGAAGCCGCACCGACGCATTTGCTCAATGAAAAGGTTGATGTGCCGATGATGCTGCGCGTTGTTGAGCGCGAGGCTCAGACTCTGAGTCAGAAAAAACAGACATTTACCTTTGAGATAGATAACGGCCTCAAGGTGTCTGGCAACGAAGATCAGCTACGCAGTGCGATTTCGAACCTGGTCTATAACGCCGTGAATCATACGCCGGAAGGCACGCATATCACCGTACGCTGGCAGCGAGTGCCGCACGGTGCCGAATTTAGCGTTGAAGATAACGGACCGGGCATTGCACCGGAGCATATTCCGCGCCTGACCGAGCGTTTTTATCGCGTTGATAAAGCGCGTTCCCGGCAAACCGGCGGTAGCGGATTAGGGTTAGCGATCGTGAAACATGCTGTGAATCATCACGAAAGTCGCCTGAATATTGAGAGTACAGTAGGAAAAGGAACACGTTTCAGTTTTGTTATCCCGGAACGTTTAATTGCCAAAAACAGCGATTAA", - "dna_sequence_length": 1296, - "functions": [ - "sensory histidine kinase in two-component regulatory system with PhoB" - ], - "id": "CDS_393", - "location": [ - [ - "NC_000913", - 417889, - "+", - 1296 - ] - ], - "md5": "cc80039cc6070a7aef4ad0eada299390", - "parent_gene": "", - "protein_md5": "230fc434f85c4660afff084d840e3f19", - "protein_translation": "MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRDFSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMNEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD", - "protein_translation_length": 431, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945042" - ], - [ - "gene_synonym", - "b0401" - ], - [ - "gene_synonym", - "brnQ" - ], - [ - "gene_synonym", - "GI:16128386" - ], - [ - "gene_synonym", - "NP_414935.1" - ], - [ - "gene_synonym", - "ECK0395" - ], - [ - "gene_synonym", - "hrbA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD99" - ], - [ - "gene_synonym", - "EcoGene:EG12168" - ], - [ - "gene_synonym", - "JW0391" - ], - [ - "gene_synonym", - "ASAP:ABE-0001394" - ] - ], - "dna_sequence": "ATGACCCATCAATTAAGATCGCGCGATATCATCGCTCTGGGCTTTATGACATTTGCGTTGTTCGTCGGCGCAGGTAACATTATTTTCCCTCCAATGGTCGGCTTACAGGCAGGCGAACACGTCTGGACTGCGGCATTCGGCTTCCTCATTACTGCCGTTGGCCTGCCGGTATTAACGGTAGTGGCGCTGGCAAAAGTTGGCGGCGGTGTTGACAGCCTCAGCACGCCAATCGGTAAAGTCGCTGGCGTACTGCTGGCAACGGTTTGTTACCTGGCGGTGGGGCCGCTTTTCGCTACGCCGCGTACAGCTACCGTTTCCTTTGAAGTGGGGATTGCGCCGCTGACGGGTGATTCCGCGCTGCCGCTGTTTATCTACAGCCTGGTCTATTTCGCTATCGTTATTCTGGTTTCGCTCTATCCGGGCAAGCTGCTGGATACCGTGGGCAACTTCCTTGCGCCGCTGAAAATTATCGCGCTGGTCATCCTGTCTGTTGCCGCTATTGTCTGGCCGGCGGGTTCTATCAGCACGGCGACTGAGGCTTATCAAAACGCTGCGTTTTCTAACGGCTTCGTTAACGGCTATCTGACCATGGATACGCTGGGCGCAATGGTGTTTGGTATCGTTATTGTTAACGCGGCGCGTTCTCGTGGCGTTACCGAAGCGCGTCTGCTGACCCGTTATACCGTCTGGGCTGGCCTGATGGCGGGTGTTGGTCTGACTCTGCTGTACCTGGCGCTGTTCCGTCTGGGGTCAGACAGCGCGTCGCTGGTCGATCAGTCTGCAAACGGCGCTGCTATTCTGCATGCTTACGTTCAGCACACCTTTGGCGGCGGCGGTAGCTTCCTGCTGGCGGCGTTAATCTTCATCGCCTGCCTGGTAACGGCAGTTGGCCTGACCTGTGCTTGTGCAGAATTCTTTGCCCAGTACGTACCGCTCTCTTATCGTACGCTGGTGTTTATCCTCGGCGGCTTCTCGATGGTGGTTTCTAACCTCGGCTTAAGCCAGCTGATCCAGATCTCCGTACCGGTGCTGACCGCTATTTATCCGCCGTGTATCGCACTGGTTGTATTAAGTTTTACACGCTCATGGTGGCATAATTCGTCCCGCGTGATTGCTCCGCCGATGTTTATCAGCCTGCTTTTTGGTATTCTCGACGGGATCAAAGCATCTGCATTCAGCGATATCTTACCGTCCTGGGCGCAGCGTTTACCGCTGGCCGAACAAGGTCTGGCGTGGTTAATGCCAACAGTGGTGATGGTGGTTCTGGCCATTATCTGGGATCGCGCGGCAGGTCGTCAGGTGACCTCCAGCGCTCACTAA", - "dna_sequence_length": 1320, - "functions": [ - "branched-chain amino acid transport system 2 carrier protein", - "LIV-II transport system for Ile, Leu, and Val" - ], - "id": "CDS_394", - "location": [ - [ - "NC_000913", - 419591, - "+", - 1320 - ] - ], - "md5": "782426df41a0f63a4ad2f2705f46e19e", - "parent_gene": "", - "protein_md5": "bab745c09ee80710ad1f5407e19f9037", - "protein_translation": "MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH", - "protein_translation_length": 439, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0402" - ], - [ - "gene_synonym", - "JW5055" - ], - [ - "gene_synonym", - "proY" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAE2" - ], - [ - "gene_synonym", - "GI:16128387" - ], - [ - "gene_synonym", - "EcoGene:EG13609" - ], - [ - "gene_synonym", - "ECK0396" - ], - [ - "gene_synonym", - "yajM" - ], - [ - "gene_synonym", - "ASAP:ABE-0001398" - ], - [ - "gene_synonym", - "GeneID:945050" - ], - [ - "gene_synonym", - "hisY" - ], - [ - "gene_synonym", - "NP_414936.1" - ] - ], - "dna_sequence": "ATGGAAAGTAAGAACAAGCTAAAGCGTGGGCTAAGTACCCGCCACATACGCTTTATGGCACTGGGTTCAGCAATTGGCACCGGGCTGTTTTACGGTTCGGCAGACGCCATCAAAATGGCCGGTCCGAGCGTGTTGTTGGCCTATATTATCGGTGGTATCGCGGCGTATATCATTATGCGTGCGCTGGGGGAAATGTCGGTACATAACCCGGCCGCCAGCTCTTTCTCGCGTTATGCGCAGGAAAACCTCGGCCCGCTGGCAGGTTACATTACCGGCTGGACCTACTGCTTTGAAATCCTTATTGTCGCCATCGCCGATGTGACCGCTTTTGGTATCTATATGGGTGTCTGGTTCCCGACGGTGCCGCACTGGATTTGGGTACTGAGCGTGGTGCTGATCATTTGCGCCGTAAACCTGATGAGCGTGAAGGTATTCGGTGAGCTGGAATTCTGGTTCTCGTTCTTTAAAGTCGCCACCATCATCATCATGATTGTCGCCGGTTTCGGCATCATCATCTGGGGGATTGGCAACGGCGGGCAACCGACCGGTATTCATAACCTGTGGAGCAACGGCGGCTTCTTCAGTAACGGCTGGCTTGGCATGGTAATGTCGTTGCAAATGGTGATGTTTGCTTACGGTGGGATCGAAATTATCGGGATTACCGCCGGTGAAGCGAAAGATCCTGAGAAATCGATACCGCGTGCGATTAACTCCGTGCCGATGCGTATTCTGGTGTTCTACGTCGGTACGCTGTTCGTCATTATGTCTATCTACCCGTGGAATCAGGTTGGCACTGCCGGTAGCCCGTTCGTGCTGACGTTCCAGCATATGGGCATTACCTTTGCCGCCAGCATTCTTAACTTTGTTGTGCTGACTGCTTCGCTGTCGGCAATTAACAGTGATGTATTTGGCGTAGGCCGTATGCTCCACGGTATGGCAGAGCAGGGCAGCGCGCCGAAAATTTTCAGCAAAACGTCGCGTCGCGGTATTCCGTGGGTTACGGTGCTGGTGATGACTACCGCGCTGCTGTTTGCGGTGTATCTGAACTACATCATGCCGGAAAACGTCTTCCTGGTGATCGCTTCGCTGGCAACCTTCGCCACGGTGTGGGTGTGGATTATGATCCTGCTGTCGCAAATTGCCTTCCGTCGCCGTTTGCCGCCAGAAGAAGTTAAGGCGCTGAAATTTAAAGTGCCGGGTGGGGTAGCAACGACCATCGGCGGGCTGATTTTCCTGCTCTTTATTATCGGGTTGATTGGTTATCACCCGGATACGCGTATCTCGCTGTATGTCGGTTTCGCGTGGATTGTTGTGCTGTTGATTGGCTGGATGTTTAAACGCCGCCACGATCGTCAGCTGGCTGAAAACCAGTAA", - "dna_sequence_length": 1374, - "functions": [ - "proline-specific permease" - ], - "id": "CDS_395", - "location": [ - [ - "NC_000913", - 420986, - "+", - 1374 - ] - ], - "md5": "21272894cdb4e313e1b2380c20542b2a", - "parent_gene": "", - "protein_md5": "111a14e2f39729750ab3bfc622cd4712", - "protein_translation": "MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLAENQ", - "protein_translation_length": 457, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0403" - ], - [ - "gene_synonym", - "malZ" - ], - [ - "gene_synonym", - "ASAP:ABE-0001402" - ], - [ - "gene_synonym", - "GeneID:949131" - ], - [ - "gene_synonym", - "ECK0397" - ], - [ - "gene_synonym", - "NP_414937.2" - ], - [ - "gene_synonym", - "EcoGene:EG10565" - ], - [ - "gene_synonym", - "JW0393" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21517" - ], - [ - "gene_synonym", - "GI:345452716" - ] - ], - "dna_sequence": "ATGTTAAATGCATGGCACCTGCCGGTGCCCCCATTTGTTAAACAAAGCAAAGATCAACTGCTCATTACACTGTGGCTGACGGGCGAAGACCCACCGCAGCGCATTATGCTGCGTACAGAACACGATAACGAAGAAATGTCAGTACCGATGCATAAGCAGCGCAGTCAGCCGCAGCCTGGCGTCACCGCATGGCGTGCGGCGATTGATCTCTCCAGCGGACAACCCCGGCGGCGTTACAGTTTCAAACTGCTGTGGCACGATCGCCAGCGTTGGTTTACACCGCAGGGCTTCAGCCGAATGCCGCCGGCACGACTGGAGCAGTTTGCCGTCGATGTACCGGATATCGGCCCACAATGGGCTGCGGATCAGATTTTTTATCAGATCTTCCCTGATCGTTTTGCGCGTAGTCTTCCTCGTGAAGCTGAACAGGATCATGTCTATTACCATCATGCAGCCGGACAAGAGATCATCTTGCGTGACTGGGATGAACCGGTCACGGCGCAGGCGGGCGGATCAACGTTCTATGGCGGCGATCTGGACGGGATAAGCGAAAAACTGCCGTATCTGAAAAAGCTTGGCGTGACAGCGCTGTATCTCAATCCGGTGTTTAAAGCTCCCAGCGTACATAAATACGATACCGAGGATTATCGCCATGTCGATCCGCAGTTTGGCGGTGATGGGGCGTTGCTGCGTTTGCGACACAATACGCAGCAGCTGGGAATGCGGCTGGTGCTGGACGGCGTGTTTAACCACAGTGGCGATTCCCATGCCTGGTTTGACAGGCATAATCGTGGCACGGGTGGTGCTTGTCACAACCCCGAATCGCCCTGGCGCGACTGGTACTCGTTTAGTGATGATGGCACGGCGCTCGACTGGCTTGGCTATGCCAGCTTGCCGAAGCTGGATTATCAGTCGGAAAGTCTGGTGAATGAAATTTATCGCGGGGAAGACAGTATTGTCCGCCACTGGCTGAAAGCGCCGTGGAATATGGACGGCTGGCGGCTGGATGTGGTGCATATGCTGGGGGAGGCGGGTGGGGCGCGCAATAATATGCAGCACGTTGCCGGGATCACCGAAGCGGCGAAAGAAACCCAGCCGGAAGCGTATATTGTCGGCGAACATTTTGGCGATGCACGGCAATGGTTACAGGCCGATGTGGAAGATGCCGCCATGAACTATCGTGGCTTCACATTCCCGTTGTGGGGATTTCTTGCCAATACCGATATCTCTTACGATCCGCAGCAAATTGATGCCCAAACCTGTATGGCCTGGATGGATAATTACCGCGCAGGGCTTTCTCATCAACAACAATTACGTATGTTTAATCAGCTCGACAGCCACGATACTGCGCGATTTAAAACGCTGCTCGGTCGGGATATTGCGCGCCTGCCGCTGGCGGTGGTCTGGCTGTTCACCTGGCCTGGTGTACCGTGCATTTATTACGGTGATGAAGTAGGACTGGATGGCAAAAACGATCCGTTTTGCCGTAAACCGTTCCCCTGGCAGGTGGAAAAGCAGGATACGGCGTTATTCGCGCTGTACCAGCGAATGATTGCGCTGCGTAAGAAAAGTCAGGCGCTACGTCATGGCGGCTGTCAGGTGCTGTATGCGGAAGATAACGTGGTGGTATTTGTCCGCGTGCTGAATCAGCAACGTGTACTGGTGGCAATCAACCGTGGCGAGGCCTGTGAAGTGGTGCTACCCGCGTCACCGTTTCTCAATGCCGTGCAATGGCAATGCAAAGAAGGGCATGGGCAACTGACTGACGGGATTCTGGCTTTGCCTGCCATTTCGGCTACGGTATGGATGAACTAA", - "dna_sequence_length": 1815, - "functions": [ - "maltodextrin glucosidase" - ], - "id": "CDS_396", - "location": [ - [ - "NC_000913", - 422518, - "+", - 1815 - ] - ], - "md5": "b6bab09b04294562343213f3252f1f31", - "parent_gene": "", - "protein_md5": "31ba00c2069d04a5ea9a4d3a66623e1e", - "protein_translation": "MLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMPPARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYQRMIALRKKSQALRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACEVVLPASPFLNAVQWQCKEGHGQLTDGILALPAISATVWMN", - "protein_translation_length": 604, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0398" - ], - [ - "gene_synonym", - "b0404" - ], - [ - "gene_synonym", - "NP_414938.1" - ], - [ - "gene_synonym", - "GI:16128389" - ], - [ - "gene_synonym", - "GeneID:949132" - ], - [ - "gene_synonym", - "ASAP:ABE-0001404" - ], - [ - "gene_synonym", - "acpD" - ], - [ - "gene_synonym", - "yajB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21515" - ], - [ - "gene_synonym", - "acpH" - ], - [ - "gene_synonym", - "EcoGene:EG11095" - ], - [ - "gene_synonym", - "JW0394" - ] - ], - "dna_sequence": "ATGAATTTTTTAGCTCACCTGCATTTAGCCCATCTCGCGGAAAGCTCGCTTTCCGGCAATTTACTGGCTGATTTCGTACGCGGAAATCCTGAAGAAAGTTTTCCGCCCGACGTCGTGGCTGGCATTCATATGCATCGACGTATCGACGTATTGACTGACAATCTGCCGGAAGTCCGCGAAGCACGGGAGTGGTTTCGTAGTGAAACGCGCCGCGTTGCGCCTATTACGCTGGATGTCATGTGGGATCACTTTCTTTCCCGCCACTGGTCGCAGCTGTCGCCGGACTTTCCGCTACAGGAATTTGTCTGTTATGCCCGCGAGCAAGTGATGACGATTTTGCCGGACTCACCGCCACGTTTTATCAATCTGAACAATTACTTGTGGTCAGAGCAGTGGCTGGTGCGCTATCGCGATATGGATTTCATCCAGAACGTGTTAAACGGCATGGCAAGCCGCCGCCCACGTCTGGATGCCCTGCGTGACTCCTGGTACGATTTAGACGCTCATTATGACGCCCTCGAAACCCGCTTCTGGCAGTTTTATCCGCGGATGATGGCGCAGGCGTCACGCAAGGCGTTATAA", - "dna_sequence_length": 582, - "functions": [ - "acyl carrier protein (ACP) phosphodiesterase", - "ACP hydrolyase" - ], - "id": "CDS_397", - "location": [ - [ - "NC_000913", - 424918, - "-", - 582 - ] - ], - "md5": "9ffb26c06aec2303706433d8188cfe6f", - "parent_gene": "", - "protein_md5": "2502d6cf4bbc03565b0eae18159ac0f1", - "protein_translation": "MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHMHRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFVCYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQFYPRMMAQASRKAL", - "protein_translation_length": 193, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "queA" - ], - [ - "gene_synonym", - "ECK0399" - ], - [ - "gene_synonym", - "b0405" - ], - [ - "gene_synonym", - "EcoGene:EG10812" - ], - [ - "gene_synonym", - "GI:16128390" - ], - [ - "gene_synonym", - "GeneID:944905" - ], - [ - "gene_synonym", - "NP_414939.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7F9" - ], - [ - "gene_synonym", - "ASAP:ABE-0001411" - ], - [ - "gene_synonym", - "JW0395" - ] - ], - "dna_sequence": "ATGCGCGTTACCGATTTCTCCTTTGAATTGCCCGAATCCCTGATTGCCCACTATCCCATGCCTGAACGCAGTAGCTGTCGTTTACTGTCGCTGGACGGGCCGACGGGCGCGCTGACGCACGGTACTTTCACCGATTTACTTGATAAGCTCAACCCCGGCGATCTTCTGGTTTTTAATAATACCCGCGTGATCCCGGCGCGCCTGTTTGGGCGTAAAGCCAGCGGCGGCAAGATTGAAGTGCTGGTTGAACGGATGCTCGACGACAAACGCATTCTTGCGCATATTCGCGCCTCGAAAGCGCCAAAACCTGGCGCAGAACTGCTGCTGGGCGATGACGAAAGTATTAACGCAACAATGACCGCGCGCCACGGCGCACTGTTTGAAGTCGAATTTAATGATGAACGCTCGGTGCTGGATATTCTCAACAGCATCGGCCATATGCCGCTGCCGCCGTATATCGACCGTCCGGACGAAGACGCTGACCGCGAACTTTATCAAACCGTTTATAGCGAAAAACCGGGCGCGGTTGCAGCCCCGACCGCAGGTCTGCATTTTGACGAGCCTTTGCTGGAAAAATTGCGCGCCAAAGGCGTGGAGATGGCGTTTGTGACGTTGCACGTTGGTGCGGGCACCTTCCAGCCGGTGCGCGTCGACACCATTGAAGATCACATCATGCACTCGGAATACGCTGAAGTACCGCAGGATGTGGTAGACGCGGTACTGGCGGCGAAAGCGCGCGGTAACCGGGTGATTGCGGTTGGCACCACTTCAGTACGTTCGCTGGAAAGCGCGGCTCAGGCAGCGAAAAACGATCTCATTGAACCGTTCTTCGACGATACCCAAATCTTTATCTATCCGGGCTTCCAGTACAAAGTGGTCGATGCGCTGGTGACGAACTTCCACTTGCCAGAGTCGACGCTGATTATGCTGGTTTCGGCCTTTGCCGGTTATCAACACACCATGAACGCCTATAAAGCAGCGGTAGAAGAGAAATATCGCTTTTTTAGTTACGGTGATGCGATGTTTATCACGTACAATCCGCAGGCAATTAATGAGCGCGTCGGGGAGTAA", - "dna_sequence_length": 1071, - "functions": [ - "S-adenosylmethionine:tRNA ribosyltransferase-isomerase" - ], - "id": "CDS_398", - "location": [ - [ - "NC_000913", - 425011, - "+", - 1071 - ] - ], - "md5": "1478438441e828ef5019e25121213794", - "parent_gene": "", - "protein_md5": "6c24b5c8dd2910015562bbc01843a363", - "protein_translation": "MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFITYNPQAINERVGE", - "protein_translation_length": 356, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0406" - ], - [ - "gene_synonym", - "tgt" - ], - [ - "gene_synonym", - "GI:16128391" - ], - [ - "gene_synonym", - "ASAP:ABE-0001413" - ], - [ - "gene_synonym", - "GeneID:949130" - ], - [ - "gene_synonym", - "EcoGene:EG10996" - ], - [ - "gene_synonym", - "NP_414940.1" - ], - [ - "gene_synonym", - "vacC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A847" - ], - [ - "gene_synonym", - "ECK0400" - ], - [ - "gene_synonym", - "JW0396" - ] - ], - "dna_sequence": "ATGAAATTTGAACTGGACACCACCGACGGTCGCGCACGCCGTGGCCGCCTGGTCTTTGATCGTGGCGTAGTGGAAACGCCTTGTTTTATGCCTGTTGGCACCTACGGCACCGTAAAAGGGATGACGCCGGAAGAAGTTGAAGCCACTGGCGCGCAAATTATCCTCGGCAACACCTTCCACCTGTGGCTGCGCCCGGGCCAGGAAATCATGAAACTGCACGGCGATCTGCACGATTTTATGCAGTGGAAGGGGCCGATCCTCACCGACTCCGGCGGCTTCCAGGTCTTCAGCCTTGGCGATATTCGTAAAATCACCGAACAGGGCGTGCACTTCCGTAACCCGATCAACGGCGATCCGATTTTCCTCGATCCTGAAAAATCAATGGAGATTCAGTACGATCTTGGTTCGGATATCGTCATGATCTTTGATGAGTGTACGCCGTATCCTGCTGACTGGGATTACGCAAAACGCTCCATGGAGATGTCTCTGCGTTGGGCGAAGCGTAGCCGTGAGCGTTTTGACAGTCTCGGAAACAAAAATGCGCTGTTTGGTATCATCCAGGGCAGCGTTTACGAAGATTTACGTGATATTTCTGTTAAAGGTCTGGTAGATATCGGTTTTGATGGCTACGCTGTCGGCGGTCTGGCTGTGGGTGAGCCGAAAGCAGATATGCACCGCATTCTGGAGCATGTATGCCCGCAAATTCCGGCAGACAAACCGCGTTACCTGATGGGCGTTGGTAAACCAGAAGACCTGGTTGAAGGCGTACGTCGTGGTATCGATATGTTTGACTGCGTAATGCCAACCCGCAACGCCCGAAATGGTCATTTGTTCGTGACCGATGGCGTGGTGAAAATCCGCAATGCGAAGTATAAGAGCGATACTGGCCCACTCGATCCTGAGTGTGATTGCTACACCTGTCGCAATTATTCACGCGCTTACTTGCATCATCTTGACCGTTGCAACGAAATATTAGGCGCGCGACTCAACACCATTCATAACCTTCGTTACTACCAGCGTTTGATGGCGGGTTTACGCAAGGCTATTGAAGAGGGTAAATTAGAGAGCTTCGTAACTGATTTTTACCAGCGTCAGGGGCGAGAAGTACCACCTTTGAACGTTGATTAA", - "dna_sequence_length": 1128, - "functions": [ - "tRNA-guanine transglycosylase" - ], - "id": "CDS_399", - "location": [ - [ - "NC_000913", - 426137, - "+", - 1128 - ] - ], - "md5": "368adf52c3284d17febdb8ccfd2d0d9d", - "parent_gene": "", - "protein_md5": "91ce89c8c196f54ebdda1ef42dfb6aee", - "protein_translation": "MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPEEVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIRKITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVGEPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD", - "protein_translation_length": 375, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADZ7" - ], - [ - "gene_synonym", - "b0407" - ], - [ - "gene_synonym", - "NP_414941.1" - ], - [ - "gene_synonym", - "GI:16128392" - ], - [ - "gene_synonym", - "ASAP:ABE-0001415" - ], - [ - "gene_synonym", - "GeneID:945374" - ], - [ - "gene_synonym", - "yajC" - ], - [ - "gene_synonym", - "JW0397" - ], - [ - "gene_synonym", - "ECK0401" - ], - [ - "gene_synonym", - "EcoGene:EG11096" - ] - ], - "dna_sequence": "ATGAGCTTTTTTATTTCTGATGCGGTAGCGGCAACGGGTGCACCGGCGCAAGGTAGCCCGATGTCTTTGATTTTGATGCTGGTGGTATTCGGTCTGATTTTCTATTTCATGATCCTGCGTCCACAGCAGAAGCGCACCAAAGAACACAAAAAGCTGATGGACTCCATTGCCAAAGGTGATGAAGTTCTGACGAACGGTGGCCTGGTTGGTCGCGTAACCAAAGTAGCGGAAAACGGCTACATTGCTATCGCGCTGAATGACACCACTGAAGTAGTTATTAAACGTGACTTCGTAGCTGCCGTCCTGCCGAAAGGCACCATGAAGGCGCTGTAA", - "dna_sequence_length": 333, - "functions": [ - "SecYEG protein translocase auxillary subunit" - ], - "id": "CDS_400", - "location": [ - [ - "NC_000913", - 427287, - "+", - 333 - ] - ], - "md5": "8b7db9fae8a95adbfa0a64ca402e7a5b", - "parent_gene": "", - "protein_md5": "71affcd52404a53dba2f3b6f1bfef285", - "protein_translation": "MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL", - "protein_translation_length": 110, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0408" - ], - [ - "gene_synonym", - "EcoGene:EG10938" - ], - [ - "gene_synonym", - "secD" - ], - [ - "gene_synonym", - "GI:16128393" - ], - [ - "gene_synonym", - "NP_414942.1" - ], - [ - "gene_synonym", - "GeneID:949133" - ], - [ - "gene_synonym", - "ASAP:ABE-0001417" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG90" - ], - [ - "gene_synonym", - "JW0398" - ], - [ - "gene_synonym", - "ECK0402" - ] - ], - "dna_sequence": "GTGTTAAACCGTTATCCTTTGTGGAAGTACGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACTGCTAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACTCCACTGACACCCAGTTGCGCGCTCGTGAAGCATTAATGGGCGTTATGGGTGACAAATACGTCGTGGCGCTTAACCTTGCCCCGGCAACGCCGCGCTGGCTGGCAGCTATTCACGCTGAGCCGATGAAGCTCGGCCTTGACCTGCGTGGCGGCGTTCACTTCCTGATGGAAGTGGATATGGACACCGCGCTTGGCAAACTCCAGGAACAAAATATCGATAGCCTACGCAGTGACCTGCGCGAAAAGGGCATCCCGTATACCACTGTTCGTAAAGAAAACAACTACGGCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATTAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTAATATCCTGCGTAACCGTGTAAACCAACTTGGCGTGGCGGAGCCGGTGGTTCAGCGTCAGGGTGCTGACCGTATCGTTGTTGAACTGCCAGGTATTCAGGACACTGCGCGTGCGAAAGAGATTCTGGGTGCGACGGCAACGCTGGAATTCCGTCTGGTAAACACCAACGTTGACCAGGCCGCTGCGGCATCCGGTCGCGTACCGGGCGACTCTGAAGTGAAACAGACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATCTCGCTCGATAGCGCTGGTGGTAACATCATGTCTAACTTCACTAAGGACAACATCGGCAAACCGATGGCAACCCTGTTTGTGGAGTACAAAGACAGCGGTAAGAAAGATGCAAATGGTCGTGCGGTTCTGGTGAAACAGGAAGAGGTGATTAACATCGCCAACATCCAGTCTCGTCTGGGTAACAGCTTCCGTATCACCGGCATCAACAACCCGAACGAAGCCCGTCAGCTGTCACTGCTGCTGCGTGCCGGTGCGTTGATCGCGCCGATTCAGATTGTTGAAGAACGTACCATTGGCCCAACCCTGGGTATGCAGAACATTGAACAGGGGCTGGAGGCTTGCCTTGCCGGTCTGCTGGTTTCTATTCTGTTCATGATCATCTTCTATAAGAAGTTTGGTCTGATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTATGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAAGAGTTGAGCAACGGACGTACTGTTCAACAGGCAATTGATGAAGGTTATCGTGGCGCATTCAGTTCTATCTTCGATGCGAACATCACCACGCTGATTAAAGTCATCATCCTGTACGCAGTGGGTACCGGGGCAATTAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGA", - "dna_sequence_length": 1848, - "functions": [ - "SecYEG protein translocase auxillary subunit" - ], - "id": "CDS_401", - "location": [ - [ - "NC_000913", - 427647, - "+", - 1848 - ] - ], - "md5": "242fdb9dbae2e5484519a182221a2916", - "parent_gene": "", - "protein_md5": "51fdfca8e71148381d19e004eafb7861", - "protein_translation": "MLNRYPLWKYVMLIVVIVIGLLYALPNLFGEDPAVQITGARGVAASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDSTDTQLRAREALMGVMGDKYVVALNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLREKGIPYTTVRKENNYGLSITFRDAKARDEAIAYLSKRHPDLVISSQGSNQLRAVMSDARLSEAREYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIEQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIVGIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI", - "protein_translation_length": 615, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001419" - ], - [ - "gene_synonym", - "secF" - ], - [ - "gene_synonym", - "GeneID:949120" - ], - [ - "gene_synonym", - "b0409" - ], - [ - "gene_synonym", - "GI:16128394" - ], - [ - "gene_synonym", - "NP_414943.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG93" - ], - [ - "gene_synonym", - "JW0399" - ], - [ - "gene_synonym", - "EcoGene:EG10940" - ], - [ - "gene_synonym", - "ECK0403" - ] - ], - "dna_sequence": "GTGGCACAGGAATATACTGTTGAACAACTAAACCACGGCCGTAAAGTCTATGACTTTATGCGCTGGGACTACTGGGCTTTCGGCATCTCTGGTCTGCTGTTAATCGCTGCTATCGTTATTATGGGCGTGCGCGGCTTTAACTGGGGGCTGGATTTCACCGGTGGTACGGTTATTGAAATTACGCTCGAAAAACCGGCTGAAATTGACGTAATGCGTGATGCATTGCAAAAAGCCGGTTTTGAAGAGCCGATGCTGCAAAACTTTGGTAGCAGCCATGACATCATGGTCCGTATGCCGCCTGCTGAAGGCGAAACCGGCGGTCAGGTGTTGGGCAGCCAGGTTCTGAAGGTGATTAACGAATCCACCAATCAGAATGCAGCAGTGAAGCGTATTGAGTTCGTCGGTCCGAGCGTGGGGGCAGACCTTGCGCAAACCGGTGCGATGGCGTTGATGGCAGCGCTGCTGTCTATCCTCGTGTACGTAGGTTTCCGCTTTGAGTGGCGACTGGCGGCAGGGGTGGTTATTGCGCTGGCGCACGACGTTATCATTACGCTGGGTATTTTGTCGTTATTCCATATCGAGATTGACCTGACCATTGTGGCATCGTTGATGTCGGTTATCGGTTACTCGCTTAACGACAGTATCGTGGTATCGGACCGTATTCGTGAAAACTTCCGCAAGATCCGTCGCGGTACGCCTTACGAAATCTTTAACGTGTCCTTGACCCAGACGCTGCACCGTACCTTGATCACATCCGGTACTACCTTGATGGTTATCCTGATGCTGTACCTCTTCGGTGGTCCGGTACTGGAAGGCTTCTCGCTGACCATGCTTATCGGTGTTTCCATCGGTACTGCATCTTCCATCTATGTGGCATCTGCGTTGGCTCTGAAACTGGGTATGAAGCGCGAACACATGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAA", - "dna_sequence_length": 972, - "functions": [ - "SecYEG protein translocase auxillary subunit" - ], - "id": "CDS_402", - "location": [ - [ - "NC_000913", - 429505, - "+", - 972 - ] - ], - "md5": "32d4c809aac078b0a6f6bf5faefd0bfa", - "parent_gene": "", - "protein_md5": "fd56b079f665d458d48c00e62f1a661d", - "protein_translation": "MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVRGFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAEGETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLAQTGAMALMAALLSILVYVGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLTMLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP", - "protein_translation_length": 323, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128395" - ], - [ - "gene_synonym", - "b0410" - ], - [ - "gene_synonym", - "GeneID:945051" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAQ2" - ], - [ - "gene_synonym", - "ASAP:ABE-0001422" - ], - [ - "gene_synonym", - "ECK0404" - ], - [ - "gene_synonym", - "JW0400" - ], - [ - "gene_synonym", - "yajD" - ], - [ - "gene_synonym", - "NP_414944.1" - ], - [ - "gene_synonym", - "EcoGene:EG11097" - ] - ], - "dna_sequence": "ATGGCTATCATCCCAAAAAACTATGCGCGGTTAGAAAGCGGCTATCGCGAAAAAGCATTAAAAATCTATCCGTGGGTCTGCGGTCGCTGTTCCCGCGAGTTTGTTTATTCCAACCTGCGTGAACTTACCGTTCACCACATTGATCACGACCATACCAATAACCCGGAAGATGGCAGTAACTGGGAATTGTTGTGTCTCTATTGCCACGATCATGAGCATTCGAAATATACCGAAGCGGATCAGTATGGTACGACCGTTATCGCAGGGGAAGATGCGCAGAAAGATGTCGGTGAAGCGAAGTACAACCCATTCGCTGACCTGAAAGCGATGATGAACAAGAAGAAGTGA", - "dna_sequence_length": 348, - "functions": [ - "HNH nuclease family protein" - ], - "id": "CDS_403", - "location": [ - [ - "NC_000913", - 430605, - "+", - 348 - ] - ], - "md5": "46b76d58bce4cfee6fc7c01279b8e520", - "parent_gene": "", - "protein_md5": "9423b535b2adce32a0371dc85f4279dc", - "protein_translation": "MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYNPFADLKAMMNKKK", - "protein_translation_length": 115, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "nupA" - ], - [ - "gene_synonym", - "T6rec" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A927" - ], - [ - "gene_synonym", - "b0411" - ], - [ - "gene_synonym", - "GeneID:946242" - ], - [ - "gene_synonym", - "GI:16128396" - ], - [ - "gene_synonym", - "NP_414945.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001425" - ], - [ - "gene_synonym", - "tsx" - ], - [ - "gene_synonym", - "ECK0405" - ], - [ - "gene_synonym", - "JW0401" - ], - [ - "gene_synonym", - "EcoGene:EG11035" - ] - ], - "dna_sequence": "ATGAAAAAAACATTACTGGCAGCCGGTGCGGTACTGGCGCTCTCTTCGTCTTTTACTGTCAACGCAGCTGAAAACGACAAACCGCAGTATCTTTCCGACTGGTGGCACCAGAGCGTTAACGTTGTCGGAAGCTATCACACCCGTTTCGGACCGCAGATCCGCAACGATACCTACCTTGAGTACGAAGCATTCGCTAAAAAAGACTGGTTCGACTTCTATGGTTATGCGGATGCGCCGGTATTCTTCGGCGGTAACTCCGATGCTAAAGGTATCTGGAACCACGGTTCTCCGCTGTTTATGGAAATCGAACCACGTTTCTCCATCGACAAGCTGACCAATACTGACCTTAGCTTCGGTCCGTTCAAAGAGTGGTACTTCGCGAACAACTACATTTACGACATGGGTCGTAATAAAGATGGTCGCCAGAGCACCTGGTACATGGGTCTGGGTACCGATATCGACACTGGCCTGCCGATGAGCCTGTCCATGAACGTCTATGCGAAATACCAGTGGCAGAACTATGGCGCAGCGAACGAAAACGAGTGGGACGGTTACCGTTTCAAAATTAAATACTTTGTGCCGATTACCGATCTGTGGGGCGGTCAGCTGAGCTACATCGGCTTCACCAACTTCGACTGGGGTTCCGATTTAGGGGATGACAGCGGTAACGCAATCAACGGTATTAAGACCCGTACTAATAACTCTATCGCTTCCAGCCATATTCTGGCTCTGAACTACGATCACTGGCACTACTCTGTCGTAGCTCGTTACTGGCACGACGGTGGTCAGTGGAACGACGATGCAGAACTGAACTTCGGCAACGGCAACTTCAACGTTCGCTCTACCGGCTGGGGTGGTTACCTGGTAGTAGGTTACAACTTCTGA", - "dna_sequence_length": 885, - "functions": [ - "nucleoside channel, receptor of phage T6 and colicin K" - ], - "id": "CDS_404", - "location": [ - [ - "NC_000913", - 432013, - "-", - 885 - ] - ], - "md5": "184133515af8e304c776154b02ef385c", - "parent_gene": "", - "protein_md5": "ed1b89a738bb5f7ee793c8ae2e770053", - "protein_translation": "MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGSYHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEIEPRFSIDKLTNTDLSFGPFKEWYFANNYIYDMGRNKDGRQSTWYMGLGTDIDTGLPMSLSMNVYAKYQWQNYGAANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLGDDSGNAINGIKTRTNNSIASSHILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGNFNVRSTGWGGYLVVGYNF", - "protein_translation_length": 294, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5056" - ], - [ - "gene_synonym", - "GI:90111129" - ], - [ - "gene_synonym", - "NP_414946.4" - ], - [ - "gene_synonym", - "EcoGene:EG12874" - ], - [ - "gene_synonym", - "ASAP:ABE-0001433" - ], - [ - "gene_synonym", - "b0412" - ], - [ - "gene_synonym", - "GeneID:947233" - ], - [ - "gene_synonym", - "yajI" - ], - [ - "gene_synonym", - "ECK0406" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46122" - ] - ], - "dna_sequence": "ATGAATACTAACGTTTTTCGACTGCTCCTGCTGGGAAGCCTGTTCAGCCTTAGCGCCTGTGTGCAGCAAAGTGAAGTGCGACAGATGAAACACAGCGTCAGCACGCTGAACCAGGAGATGACGCAACTCAATCAAGAAACAGTCAAAATCACTCAGCAAAACAGGCTGAATGCAAAATCCAGCAGTGGGGTTTACCTTCTGCCTGGAGCGAAAACACCGGCAAGACTGGAAAGCCAGATCGGTACTTTACGTATGTCGCTGGTGAATATTACGCCTGATGCAGATGGCACCACCCTTACACTACGTATTCAGGGTGAGTCGAATGATCCCTTGCCCGCATTCAGCGGAACTGTTGAATATGGGCAAATTCAGGGAACAATAGACAACTTTCAGGAAATCAATGTGCAGAATCAATTGATTAATGCCCCTGCCAGCGTCCTCGCCCCCAGCGATGTTGATATTCCGTTACAGTTAAAGGGGATTTCTGTGGATCAGTTAGGCTTTGTACGTATCCACGACATTCAACCTGTTATGCAGTAA", - "dna_sequence_length": 540, - "functions": [ - "putative lipoprotein" - ], - "id": "CDS_405", - "location": [ - [ - "NC_000913", - 432851, - "-", - 540 - ] - ], - "md5": "3c0f53a20c0c955989f6447fcf55e535", - "parent_gene": "", - "protein_md5": "f85fab297748e29ce7fcec9f4e5e81c4", - "protein_translation": "MNTNVFRLLLLGSLFSLSACVQQSEVRQMKHSVSTLNQEMTQLNQETVKITQQNRLNAKSSSGVYLLPGAKTPARLESQIGTLRMSLVNITPDADGTTLTLRIQGESNDPLPAFSGTVEYGQIQGTIDNFQEINVQNQLINAPASVLAPSDVDIPLQLKGISVDQLGFVRIHDIQPVMQ", - "protein_translation_length": 179, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ribX" - ], - [ - "gene_synonym", - "NP_414947.1" - ], - [ - "gene_synonym", - "GeneID:947437" - ], - [ - "gene_synonym", - "GI:16128398" - ], - [ - "gene_synonym", - "ASAP:ABE-0001437" - ], - [ - "gene_synonym", - "EcoGene:EG11320" - ], - [ - "gene_synonym", - "ybaD" - ], - [ - "gene_synonym", - "b0413" - ], - [ - "gene_synonym", - "nrdR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8D0" - ], - [ - "gene_synonym", - "JW0403" - ], - [ - "gene_synonym", - "ECK0407" - ] - ], - "dna_sequence": "ATGCATTGCCCATTCTGTTTCGCCGTGGACACTAAGGTAATTGACTCTCGTCTCGTGGGCGAGGGTTCATCCGTACGCCGCCGTCGGCAGTGTCTGGTGTGTAATGAACGTTTCACCACCTTTGAAGTGGCGGAGCTGGTTATGCCGCGTGTTGTAAAAAGCAACGACGTGCGTGAACCGTTTAATGAAGAGAAATTGCGTAGCGGAATGCTGCGGGCGCTGGAAAAACGTCCGGTGAGTTCCGATGACGTCGAAATGGCAATCAATCATATTAAATCGCAGCTGCGCGCCACCGGTGAGCGCGAAGTGCCGAGCAAGATGATTGGCAATCTGGTGATGGAGCAATTGAAAAAGCTCGATAAAGTCGCCTATATCCGTTTTGCCTCTGTCTACCGCAGTTTCGAAGATATCAAAGAATTTGGCGAAGAGATCGCGCGCCTGGAGGACTAA", - "dna_sequence_length": 450, - "functions": [ - "Nrd regulon repressor" - ], - "id": "CDS_406", - "location": [ - [ - "NC_000913", - 433002, - "+", - 450 - ] - ], - "md5": "3f4d031991540009875bd47e554db115", - "parent_gene": "", - "protein_md5": "38a74cb1c9ac64e2eec5a461bd6814cf", - "protein_translation": "MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED", - "protein_translation_length": 149, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128399" - ], - [ - "gene_synonym", - "NP_414948.1" - ], - [ - "gene_synonym", - "b0414" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25539" - ], - [ - "gene_synonym", - "ybaE" - ], - [ - "gene_synonym", - "EcoGene:EG11321" - ], - [ - "gene_synonym", - "ECK0408" - ], - [ - "gene_synonym", - "ASAP:ABE-0001441" - ], - [ - "gene_synonym", - "GeneID:945620" - ], - [ - "gene_synonym", - "ribD" - ], - [ - "gene_synonym", - "ribG" - ], - [ - "gene_synonym", - "JW0404" - ] - ], - "dna_sequence": "GTGCAGGACGAGTATTACATGGCGCGGGCGCTAAAGCTGGCGCAACGAGGACGTTTTACCACGCATCCCAACCCGAATGTCGGGTGCGTCATTGTCAAAGATGGCGAAATTGTCGGTGAAGGTTACCACCAACGTGCGGGTGAACCACATGCCGAAGTACACGCGTTGCGTATGGCGGGTGAAAAAGCCAAAGGTGCGACCGCCTATGTCACACTCGAACCCTGTAGCCATCATGGTCGTACGCCACCGTGCTGTGACGCACTCATCGCCGCTGGCGTAGCGCGCGTGGTTGCCTCGATGCAAGATCCTAACCCGCAGGTCGCTGGGCGTGGACTTTACCGTCTGCAACAGGCTGGCATTGACGTCAGCCACGGCCTGATGATGAGTGAAGCCGAGCAATTGAATAAAGGCTTTCTCAAGCGGATGCGCACCGGCTTTCCTTATATTCAGTTAAAACTTGGCGCATCGCTTGATGGTCGCACGGCGATGGCGAGCGGCGAAAGCCAGTGGATCACTTCGCCCCAGGCGCGGCGTGATGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCATCTGGATCTGGTTGTACTGATGATGCAACTGGGTAAACAGCAAATTAACAGCATCTGGGTGGAAGCGGGGCCAACGCTCGCTGGCGCATTGCTGCAGGCGGGTTTAGTCGATGAGCTGATTGTCTATATCGCACCTAAACTATTAGGCAGCGACGCCCGCGGATTATGCACGCTGCCAGGGCTTGAGAAATTAGCCGACGCCCCCCAATTTAAATTCAAAGAGATACGTCATGTAGGCCCGGATGTTTGCCTGCATTTAGTGGGTGCATGA", - "dna_sequence_length": 1104, - "functions": [ - "fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase" - ], - "id": "CDS_407", - "location": [ - [ - "NC_000913", - 433455, - "+", - 1104 - ] - ], - "md5": "7b41709c1e295736361a0ab96456cc83", - "parent_gene": "", - "protein_md5": "5364d153bc0b79b7eabdd129e885ca0a", - "protein_translation": "MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLLRAQSHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTPVHRIVQQPGETWFARTQEDSREWPETVRTLLIPEHKGHLDLVVLMMQLGKQQINSIWVEAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLCTLPGLEKLADAPQFKFKEIRHVGPDVCLHLVGA", - "protein_translation_length": 367, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414949.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P61714" - ], - [ - "gene_synonym", - "b0415" - ], - [ - "gene_synonym", - "GeneID:946453" - ], - [ - "gene_synonym", - "ybaF" - ], - [ - "gene_synonym", - "EcoGene:EG11322" - ], - [ - "gene_synonym", - "ribH" - ], - [ - "gene_synonym", - "ASAP:ABE-0001444" - ], - [ - "gene_synonym", - "ECK0409" - ], - [ - "gene_synonym", - "GI:16128400" - ], - [ - "gene_synonym", - "ribE" - ], - [ - "gene_synonym", - "JW0405" - ] - ], - "dna_sequence": "ATGAACATTATTGAAGCTAACGTTGCTACCCCGGACGCTCGCGTCGCCATCACCATCGCGCGTTTCAACAACTTTATCAATGACAGCCTGCTGGAAGGTGCAATTGACGCACTGAAACGTATCGGTCAGGTAAAAGATGAAAACATTACCGTTGTTTGGGTGCCTGGTGCCTATGAGCTGCCGCTGGCGGCGGGTGCACTGGCTAAAACCGGTAAATACGACGCGGTGATTGCGCTGGGTACGGTTATTCGTGGTGGCACTGCCCACTTTGAATATGTCGCTGGTGGTGCAAGCAACGGCCTGGCGCATGTTGCCCAGGACAGCGAAATTCCGGTTGCTTTTGGGGTTCTGACCACTGAAAGCATTGAACAAGCGATCGAACGTGCTGGCACCAAAGCTGGCAACAAAGGTGCAGAAGCTGCACTGACCGCGCTTGAAATGATTAATGTATTGAAAGCCATCAAGGCCTGA", - "dna_sequence_length": 471, - "functions": [ - "riboflavin synthase beta chain" - ], - "id": "CDS_408", - "location": [ - [ - "NC_000913", - 434647, - "+", - 471 - ] - ], - "md5": "e30d81649a2222892bf5f09146b0eb09", - "parent_gene": "", - "protein_md5": "726e62e250bbd136faca4fd18d794103", - "protein_translation": "MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQVKDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLAHVAQDSEIPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA", - "protein_translation_length": 156, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414950.1" - ], - [ - "gene_synonym", - "groNB" - ], - [ - "gene_synonym", - "GI:16128401" - ], - [ - "gene_synonym", - "b0416" - ], - [ - "gene_synonym", - "nusB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A780" - ], - [ - "gene_synonym", - "EcoGene:EG10666" - ], - [ - "gene_synonym", - "JW0406" - ], - [ - "gene_synonym", - "ASAP:ABE-0001447" - ], - [ - "gene_synonym", - "ssyB" - ], - [ - "gene_synonym", - "GeneID:945054" - ], - [ - "gene_synonym", - "ssaD" - ], - [ - "gene_synonym", - "ECK0410" - ] - ], - "dna_sequence": "GTGAAACCTGCTGCTCGTCGCCGCGCTCGTGAGTGTGCCGTCCAGGCGCTCTACTCCTGGCAGTTGTCCCAGAACGACATCGCTGATGTTGAATACCAGTTCCTGGCTGAACAGGATGTAAAAGACGTTGACGTCCTGTACTTCCGTGAGCTGCTGGCCGGGGTGGCGACTAATACCGCATACCTCGACGGACTGATGAAGCCATACCTGTCCCGCCTGCTGGAAGAACTGGGACAGGTAGAAAAAGCAGTACTGCGCATTGCGCTGTACGAACTGTCTAAACGTAGCGATGTGCCATACAAAGTGGCCATTAACGAAGCGATCGAACTGGCGAAATCGTTCGGCGCAGAAGACAGCCATAAGTTCGTCAACGGCGTACTCGATAAAGCAGCACCTGTGATTCGCCCTAACAAAAAGTGA", - "dna_sequence_length": 420, - "functions": [ - "transcription antitermination protein" - ], - "id": "CDS_409", - "location": [ - [ - "NC_000913", - 435137, - "+", - 420 - ] - ], - "md5": "ae791b5217dd0bb63cdec2d0ffeff104", - "parent_gene": "", - "protein_md5": "ab94b0fdca273702d5dd8594481ef496", - "protein_translation": "MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKVAINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK", - "protein_translation_length": 139, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0417" - ], - [ - "gene_synonym", - "GI:16128402" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGG0" - ], - [ - "gene_synonym", - "NP_414951.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001452" - ], - [ - "gene_synonym", - "thiL" - ], - [ - "gene_synonym", - "EcoGene:EG20227" - ], - [ - "gene_synonym", - "JW0407" - ], - [ - "gene_synonym", - "GeneID:947387" - ], - [ - "gene_synonym", - "ECK0411" - ] - ], - "dna_sequence": "ATGGCATGTGGCGAGTTCTCCCTGATTGCCCGTTATTTTGACCGTGTAAGAAGTTCTCGTCTTGATGTCGAACTGGGCATCGGCGACGATTGCGCACTTCTCAATATCCCCGAGAAACAGACCCTGGCGATCAGCACTGATACGCTGGTGGCGGGTAACCATTTCCTCCCTGATATCGATCCTGCTGATCTGGCTTATAAAGCACTGGCGGTGAACCTAAGCGATCTGGCAGCGATGGGGGCCGATCCGGCCTGGCTGACGCTGGCATTAACCTTACCGGACGTAGACGAAGCGTGGCTTGAGTCCTTCAGCGACAGTTTGTTTGATCTTCTCAATTATTACGATATGCAACTCATTGGCGGCGATACCACGCGTGGGCCATTATCAATGACGTTGGGTATCCACGGCTTTGTTCCGATGGGACGAGCCTTAACGCGCTCTGGGGCGAAACCGGGTGACTGGATCTATGTGACCGGTACACCGGGCGATAGCGCCGCCGGGCTGGCGATTTTGCAAAACCGTTTGCAGGTTGCCGATGCTAAAGATGCGGACTACTTGATCAAACGTCATCTCCGTCCATCGCCGCGTATTTTACAGGGGCAGGCACTGCGCGATCTGGCAAATTCAGCCATCGATCTCTCTGACGGTTTGATTTCCGATCTCGGGCATATCGTGAAAGCCAGCGACTGCGGCGCACGTATTGACCTGGCATTGCTGCCGTTTTCTGATGCGCTTTCTCGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCGTACCGTTTACCTGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAA", - 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- "gene_synonym", - "JW0408" - ], - [ - "gene_synonym", - "yajN" - ], - [ - "gene_synonym", - "GeneID:947542" - ], - [ - "gene_synonym", - "pgpA" - ], - [ - "gene_synonym", - "ECK0412" - ] - ], - "dna_sequence": "ATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTCGGATTCGGAAGTGGATTAAGCCCGATCGTTCCTGGGACGATGGGCTCGCTGGCAGCGATTCCGTTCTGGTATCTGATGACCTTTTTGCCCTGGCAGCTCTACTCGCTGGTGGTGATGCTGGGGATCTGTATCGGCGTCTATCTTTGTCATCAAACGGCGAAAGACATGGGTGTGCACGATCATGGCAGCATTGTCTGGGACGAATTTATTGGTATGTGGATCACGCTCATGGCGCTGCCGACCAATGACTGGCAGTGGGTTGCCGCCGGGTTTGTGATTTTCCGTATTCTGGATATGTGGAAGCCGTGGCCGATCCGCTGGTTTGATCGCAATGTGCATGGCGGCATGGGGATCATGATCGACGATATTGTCGCCGGGGTGATTTCCGCAGGCATCCTGTATTTTATCGGTCATCACTGGCCGCTGGGTATTCTGTCGTAG", - "dna_sequence_length": 519, - "functions": [ - "phosphatidylglycerophosphatase A" - ], - "id": "CDS_411", - "location": [ - [ - "NC_000913", - 436589, - "+", - 519 - ] - ], - "md5": "85fc618049820086454ee0fdeed873db", - "parent_gene": "", - "protein_md5": "21f16f854e3ba61149163dd69681337a", - "protein_translation": "MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLAAIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITLMALPTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILYFIGHHWPLGILS", - "protein_translation_length": 172, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0419" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77735" - ], - [ - "gene_synonym", - "EcoGene:EG13611" - ], - [ - "gene_synonym", - "GI:90111130" - ], - [ - "gene_synonym", - "GeneID:946903" - ], - [ - "gene_synonym", - "JW0409" - ], - [ - "gene_synonym", - "ASAP:ABE-0001457" - ], - [ - "gene_synonym", - "yajO" - ], - [ - "gene_synonym", - "ECK0413" - ], - [ - "gene_synonym", - "NP_414953.2" - ] - ], - "dna_sequence": "ATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTGTATGACCTTTGGCGAGCCAGATCGCGGTAATCACGCATGGACACTGCCGGAAGAAAGCAGCCGTCCCATAATTAAACGTGCACTGGAAGGCGGCATAAATTTCTTTGATACCGCCAACAGTTATTCTGACGGCAGCAGCGAAGAGATCGTCGGTCGCGCACTGCGGGATTTCGCCCGTCGTGAAGACGTGGTCGTTGCGACCAAAGTGTTCCATCGCGTTGGTGATTTACCGGAAGGATTATCCCGTGCGCAAATTTTGCGCTCTATCGACGACAGCCTGCGACGTCTCGGCATGGATTATGTCGATATCCTGCAAATTCATCGCTGGGATTACAACACGCCGATCGAAGAGACGCTGGAAGCCCTCAACGACGTGGTAAAAGCCGGGAAAGCGCGTTATATCGGCGCGTCATCAATGCACGCTTCGCAGTTTGCTCAGGCACTGGAACTCCAAAAACAGCACGGCTGGGCGCAGTTTGTCAGTATGCAGGATCACTACAATCTGATTTATCGTGAAGAAGAGCGCGAGATGCTACCACTGTGTTATCAGGAGGGCGTGGCGGTAATTCCATGGAGCCCGCTGGCAAGGGGCCGTCTGACGCGTCCGTGGGGAGAAACTACCGCACGACTGGTGTCTGATGAGGTGGGGAAAAATCTCTATAAAGAAAGCGATGAAAATGACGCGCAGATCGCAGAGCGGTTAACAGGCGTCAGTGAAGAACTGGGGGCGACACGAGCACAAGTTGCGCTGGCCTGGTTGTTGAGTAAACCGGGCATTGCCGCACCGATTATCGGAACTTCGCGCGAAGAACAGCTTGATGAGCTATTGAACGCGGTGGATATCACTTTGAAGCCGGAACAGATTGCCGAACTGGAAACGCCGTATAAACCGCATCCTGTCGTAGGATTTAAATAA", - "dna_sequence_length": 975, - "functions": [ - "2-carboxybenzaldehyde reductase" - ], - "id": "CDS_412", - "location": [ - [ - "NC_000913", - 438135, - "-", - 975 - ] - ], - "md5": "621018f92c1fbbaf675a0fa7581fd4af", - "parent_gene": "", - "protein_md5": "6f239857fde2e286b67a868ac42113d0", - "protein_translation": "MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPVVGFK", - "protein_translation_length": 324, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0420" - ], - [ - "gene_synonym", - "yajP" - ], - [ - "gene_synonym", - "GI:16128405" - ], - [ - "gene_synonym", - "EcoGene:EG13612" - ], - [ - "gene_synonym", - "dxs" - ], - [ - "gene_synonym", - "NP_414954.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77488" - ], - [ - "gene_synonym", - "ASAP:ABE-0001461" - ], - [ - "gene_synonym", - "ECK0414" - ], - [ - "gene_synonym", - "JW0410" - ], - [ - "gene_synonym", - "GeneID:945060" - ] - ], - "dna_sequence": "ATGAGTTTTGATATTGCCAAATACCCGACCCTGGCACTGGTCGACTCCACCCAGGAGTTACGACTGTTGCCGAAAGAGAGTTTACCGAAACTCTGCGACGAACTGCGCCGCTATTTACTCGACAGCGTGAGCCGTTCCAGCGGGCACTTCGCCTCCGGGCTGGGCACGGTCGAACTGACCGTGGCGCTGCACTATGTCTACAACACCCCGTTTGACCAATTGATTTGGGATGTGGGGCATCAGGCTTATCCGCATAAAATTTTGACCGGACGCCGCGACAAAATCGGCACCATCCGTCAGAAAGGCGGTCTGCACCCGTTCCCGTGGCGCGGCGAAAGCGAATATGACGTATTAAGCGTCGGGCATTCATCAACCTCCATCAGTGCCGGAATTGGTATTGCGGTTGCTGCCGAAAAAGAAGGCAAAAATCGCCGCACCGTCTGTGTCATTGGCGATGGCGCGATTACCGCAGGCATGGCGTTTGAAGCGATGAATCACGCGGGCGATATCCGTCCTGATATGCTGGTGATTCTCAACGACAATGAAATGTCGATTTCCGAAAATGTCGGCGCGCTCAACAACCATCTGGCACAGCTGCTTTCCGGTAAGCTTTACTCTTCACTGCGCGAAGGCGGGAAAAAAGTTTTCTCTGGCGTGCCGCCAATTAAAGAGCTGCTCAAACGCACCGAAGAACATATTAAAGGCATGGTAGTGCCTGGCACGTTGTTTGAAGAGCTGGGCTTTAACTACATCGGCCCGGTGGACGGTCACGATGTGCTGGGGCTTATCACCACGCTAAAGAACATGCGCGACCTGAAAGGCCCGCAGTTCCTGCATATCATGACCAAAAAAGGTCGTGGTTATGAACCGGCAGAAAAAGACCCGATCACTTTCCACGCCGTGCCTAAATTTGATCCCTCCAGCGGTTGTTTGCCGAAAAGTAGCGGCGGTTTGCCGAGCTATTCAAAAATCTTTGGCGACTGGTTGTGCGAAACGGCAGCGAAAGACAACAAGCTGATGGCGATTACTCCGGCGATGCGTGAAGGTTCCGGCATGGTCGAGTTTTCACGTAAATTCCCGGATCGCTACTTCGACGTGGCAATTGCCGAGCAACACGCGGTGACCTTTGCTGCGGGTCTGGCGATTGGTGGGTACAAACCCATTGTCGCGATTTACTCCACTTTCCTGCAACGCGCCTATGATCAGGTGCTGCATGACGTGGCGATTCAAAAGCTTCCGGTCCTGTTCGCCATCGACCGCGCGGGCATTGTTGGTGCTGACGGTCAAACCCATCAGGGTGCTTTTGATCTCTCTTACCTGCGCTGCATACCGGAAATGGTCATTATGACCCCGAGCGATGAAAACGAATGTCGCCAGATGCTCTATACCGGCTATCACTATAACGATGGCCCGTCAGCGGTGCGCTACCCGCGTGGCAACGCGGTCGGCGTGGAACTGACGCCGCTGGAAAAACTACCAATTGGCAAAGGCATTGTGAAGCGTCGTGGCGAGAAACTGGCGATCCTTAACTTTGGTACGCTGATGCCAGAAGCGGCGAAAGTCGCCGAATCGCTGAACGCCACGCTGGTCGATATGCGTTTTGTGAAACCGCTTGATGAAGCGTTAATTCTGGAAATGGCCGCCAGCCATGAAGCGCTGGTCACCGTAGAAGAAAACGCCATTATGGGCGGCGCAGGCAGCGGCGTGAACGAAGTGCTGATGGCCCATCGTAAACCAGTACCCGTGCTGAACATTGGCCTGCCGGACTTCTTTATTCCGCAAGGAACTCAGGAAGAAATGCGCGCCGAACTCGGCCTCGATGCCGCTGGTATGGAAGCCAAAATCAAGGCCTGGCTGGCATAA", - "dna_sequence_length": 1863, - "functions": [ - "1-deoxyxylulose-5-phosphate synthase, thiamine triphosphate-binding, FAD-requiring" - ], - "id": "CDS_413", - "location": [ - [ - "NC_000913", - 440177, - "-", - 1863 - ] - ], - "md5": "cbce08a7dc3c09f9031bfa8efb534c77", - "parent_gene": "", - "protein_md5": "4972d29224db60427f2e8050ccd576c8", - "protein_translation": "MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVSRSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEKLPIGKGIVKRRGEKLAILNFGTLMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWLA", - "protein_translation_length": 620, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945064" - ], - [ - "gene_synonym", - "b0421" - ], - [ - "gene_synonym", - "NP_414955.1" - ], - [ - "gene_synonym", - "EcoGene:EG10508" - ], - [ - "gene_synonym", - "GI:16128406" - ], - [ - "gene_synonym", - "JW0411" - ], - [ - "gene_synonym", - "ECK0415" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P22939" - ], - [ - "gene_synonym", - "ispA" - ], - [ - "gene_synonym", - "ASAP:ABE-0001463" - ] - ], - "dna_sequence": "ATGGACTTTCCGCAGCAACTCGAAGCCTGCGTTAAGCAGGCCAACCAGGCGCTGAGCCGTTTTATCGCCCCACTGCCCTTTCAGAACACTCCCGTGGTCGAAACCATGCAGTATGGCGCATTATTAGGTGGTAAGCGCCTGCGACCTTTCCTGGTTTATGCCACCGGTCATATGTTCGGCGTTAGCACAAACACGCTGGACGCACCCGCTGCCGCCGTTGAGTGTATCCACGCTTACTCATTAATTCATGATGATTTACCGGCAATGGATGATGACGATCTGCGTCGCGGTTTGCCAACCTGCCATGTGAAGTTTGGCGAAGCAAACGCGATTCTCGCTGGCGACGCTTTACAAACGCTGGCGTTCTCGATTTTAAGCGATGCCGATATGCCGGAAGTGTCGGACCGCGACAGAATTTCGATGATTTCTGAACTGGCGAGCGCCAGTGGTATTGCCGGAATGTGCGGTGGTCAGGCATTAGATTTAGACGCGGAAGGCAAACACGTACCTCTGGACGCGCTTGAGCGTATTCATCGTCATAAAACCGGCGCATTGATTCGCGCCGCCGTTCGCCTTGGTGCATTAAGCGCCGGAGATAAAGGACGTCGTGCTCTGCCGGTACTCGACAAGTATGCAGAGAGCATCGGCCTTGCCTTCCAGGTTCAGGATGACATCCTGGATGTGGTGGGAGATACTGCAACGTTGGGAAAACGCCAGGGTGCCGACCAGCAACTTGGTAAAAGTACCTACCCTGCACTTCTGGGTCTTGAGCAAGCCCGGAAGAAAGCCCGGGATCTGATCGACGATGCCCGTCAGTCGCTGAAACAACTGGCTGAACAGTCACTCGATACCTCGGCACTGGAAGCGCTAGCGGACTACATCATCCAGCGTAATAAATAA", - "dna_sequence_length": 900, - "functions": [ - "geranyltranstransferase" - ], - "id": "CDS_414", - "location": [ - [ - "NC_000913", - 441101, - "-", - 900 - ] - ], - "md5": "d22c10419287360a051e46bf0d950c0a", - "parent_gene": "", - "protein_md5": "a3f97f10bebcc599f65f6498301607e7", - "protein_translation": "MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK", - "protein_translation_length": 299, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0422" - ], - [ - "gene_synonym", - "GeneID:945069" - ], - [ - "gene_synonym", - "GI:16128407" - ], - [ - "gene_synonym", - "EcoGene:EG11098" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8G9" - ], - [ - "gene_synonym", - "ECK0416" - ], - [ - "gene_synonym", - "xseB" - ], - [ - "gene_synonym", - "ASAP:ABE-0001466" - ], - [ - "gene_synonym", - "NP_414956.1" - ], - [ - "gene_synonym", - "yajE" - ], - [ - "gene_synonym", - "JW0412" - ] - ], - "dna_sequence": "ATGCCGAAGAAAAATGAGGCGCCCGCCAGCTTTGAAAAGGCGCTGAGCGAGCTGGAACAGATTGTAACCCGTCTGGAAAGTGGCGACCTGCCGCTGGAAGAGGCGCTGAACGAGTTCGAACGCGGCGTGCAGCTGGCACGTCAGGGGCAGGCCAAATTACAACAAGCCGAACAGCGCGTACAAATTCTGCTGTCTGACAATGAAGACGCCTCTCTAACCCCTTTTACACCGGACAATGAGTAA", - "dna_sequence_length": 243, - "functions": [ - "exonuclease VII small subunit" - ], - "id": "CDS_415", - "location": [ - [ - "NC_000913", - 441343, - "-", - 243 - ] - ], - "md5": "ce2bd71895d7e0833f8a73d6ca6c4e4c", - "parent_gene": "", - "protein_md5": "0f0feee8b183ef8c8fdd4ac0df27ae16", - "protein_translation": "MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQLARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE", - "protein_translation_length": 80, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128408" - ], - [ - "gene_synonym", - "GeneID:945067" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77718" - ], - [ - "gene_synonym", - "nuvA" - ], - [ - "gene_synonym", - "b0423" - ], - [ - "gene_synonym", - "yajJ" - ], - [ - "gene_synonym", - "thiI" - ], - [ - "gene_synonym", - "yajK" - ], - [ - "gene_synonym", - "EcoGene:EG13273" - ], - [ - "gene_synonym", - "ECK0417" - ], - [ - "gene_synonym", - "NP_414957.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001470" - ], - [ - "gene_synonym", - "JW0413" - ] - ], - "dna_sequence": "ATGAAGTTTATCATTAAATTGTTCCCGGAAATCACCATCAAAAGCCAATCTGTGCGCTTGCGCTTTATAAAAATCCTTACCGGGAACATTCGTAACGTTTTAAAGCACTATGATGAGACGCTCGCTGTCGTCCGCCACTGGGATAACATCGAAGTTCGCGCAAAAGATGAAAACCAGCGTCTGGCTATTCGCGACGCTCTGACCCGTATTCCGGGTATCCACCATATTCTCGAAGTCGAAGACGTGCCGTTTACCGACATGCACGATATTTTCGAGAAAGCGTTGGTTCAGTATCGCGATCAGCTGGAAGGCAAAACCTTCTGCGTACGCGTGAAGCGCCGTGGCAAACATGATTTTAGCTCGATTGATGTGGAACGTTACGTCGGCGGCGGTTTAAATCAGCATATTGAATCCGCGCGCGTGAAGCTGACCAATCCGGATGTGACTGTCCATCTGGAAGTGGAAGACGATCGTCTCCTGCTGATTAAAGGCCGCTACGAAGGTATTGGCGGTTTCCCGATCGGCACCCAGGAAGATGTGCTGTCGCTCATTTCCGGTGGTTTCGACTCCGGTGTTTCCAGTTATATGTTGATGCGTCGCGGCTGCCGCGTGCATTACTGCTTCTTTAACCTCGGCGGCGCGGCGCATGAAATTGGCGTGCGTCAGGTGGCGCATTATCTGTGGAACCGCTTTGGCAGCTCCCACCGCGTGCGTTTTGTCGCTATTAATTTCGAACCGGTCGTCGGGGAAATTCTCGAGAAAATCGACGACGGTCAGATGGGCGTTATCCTCAAACGTATGATGGTGCGTGCCGCATCTAAAGTGGCTGAACGTTACGGCGTACAGGCGCTGGTCACCGGCGAAGCGCTCGGCCAGGTGTCCAGCCAGACGCTGACCAACCTGCGCCTGATTGATAACGTCTCCGACACGCTGATCCTGCGTCCGCTGATCTCTTACGACAAAGAGCACATCATCAACCTGGCCCGCCAGATTGGCACCGAAGACTTTGCTCGCACGATGCCGGAATATTGTGGTGTGATCTCCAAAAGCCCGACGGTGAAAGCAGTTAAATCGAAGATTGAAGCGGAAGAAGAGAAGTTCGACTTCAGCATTCTCGATAAAGTGGTTGAGGAAGCGAATAACGTTGATATCCGCGAAATCGCCCAGCAGACCGAGCAGGAAGTGGTGGAAGTGGAAACCGTCAATGGCTTCGGCCCGAACGACGTGATCCTCGATATCCGTTCTATCGATGAACAGGAAGATAAGCCACTGAAAGTCGAAGGGATTGATGTGGTTTCTCTGCCGTTCTATAAACTGAGCACCAAATTTGGCGATCTCGACCAGAACAAAACCTGGCTGCTGTGGTGTGAGCGCGGGGTGATGAGCCGTCTGCAGGCGCTCTATCTGCGCGAGCAGGGCTTTAACAATGTGAAGGTATATCGCCCGTAA", 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- [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46948" - ], - [ - "gene_synonym", - "GI:90111131" - ], - [ - "gene_synonym", - "NP_414958.4" - ], - [ - "gene_synonym", - "thiJ" - ], - [ - "gene_synonym", - "EcoGene:EG13272" - ], - [ - "gene_synonym", - "yajL" - ], - [ - "gene_synonym", - "ECK0418" - ], - [ - "gene_synonym", - "ASAP:ABE-0001472" - ] - ], - "dna_sequence": "ATGAGCGCATCGGCACTGGTTTGCCTCGCCCCTGGTAGTGAAGAGACTGAAGCCGTCACCACTATCGATCTGCTGGTTCGCGGCGGTATCAAAGTCACCACTGCCAGCGTCGCCAGCGATGGTAACCTGGCGATTACCTGCTCGCGCGGCGTGAAGCTGCTGGCGGATGCGCCGCTGGTCGAAGTGGCTGATGGCGAATATGACGTGATCGTGCTGCCTGGTGGCATTAAAGGCGCGGAGTGTTTTCGCGATAGCACTCTGCTGGTTGAAACCGTTAAACAGTTCCACCGTTCCGGGCGTATCGTCGCGGCTATTTGCGCCGCGCCAGCCACCGTGCTGGTGCCGCACGATATCTTCCCGATTGGTAATATGACCGGCTTCCCGACGCTGAAAGACAAAATTCCCGCCGAACAATGGCTGGACAAGCGCGTCGTCTGGGATGCACGGGTAAAATTGCTGACCAGCCAGGGGCCGGGTACAGCTATCGACTTTGGTCTGAAAATTATCGACCTGTTGGTTGGGCGTGAAAAAGCCCATGAAGTGGCATCACAACTGGTGATGGCGGCAGGGATTTATAATTATTACGAGTAG", - "dna_sequence_length": 591, - "functions": [ - "oxidative-stress-resistance chaperone" - ], - "id": "CDS_417", - "location": [ - [ - "NC_000913", - 443641, - "-", - 591 - ] - ], - "md5": "226f55d358d1e69630eb89ddea45a2e1", - "parent_gene": "", - "protein_md5": "fa0d3c949697af67f435b8aef0a96a5a", - "protein_translation": "MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0425" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9J4" - ], - [ - "gene_synonym", - "panE" - ], - [ - "gene_synonym", - "GI:16128410" - ], - [ - "gene_synonym", - "apbA" - ], - [ - "gene_synonym", - "ECK0419" - ], - [ - "gene_synonym", - "NP_414959.1" - ], - [ - "gene_synonym", - "GeneID:945065" - ], - [ - "gene_synonym", - "JW0415" - ], - [ - "gene_synonym", - "EcoGene:EG13271" - ], - [ - "gene_synonym", - "ASAP:ABE-0001474" - ] - ], - "dna_sequence": "ATGAAAATTACCGTATTGGGATGCGGTGCCTTAGGGCAATTATGGCTTACAGCACTTTGCAAACAGGGTCATGAAGTTCAGGGCTGGCTGCGCGTACCGCAACCTTATTGTAGCGTGAATCTGGTTGAGACAGATGGTTCGATATTTAACGAATCGCTGACCGCCAACGATCCCGATTTTCTCGCCACCAGCGATCTGCTCCTGGTGACGCTGAAAGCATGGCAGGTTTCCGATGCCGTCAAAAGCCTCGCGTCCACACTGCCTGTAACTACGCCAATACTGTTAATTCACAACGGCATGGGCACCATCGAAGAGTTGCAAAACATTCAGCAGCCATTACTGATGGGCACCACCACCCATGCAGCCCGCCGCGACGGCAATGTCATTATTCATGTGGCAAACGGTATCACGCATATTGGCCCGGCACGGCAACAGGACGGGGATTACAGTTATCTGGCGGATATTTTGCAAACCGTGTTGCCTGACGTTGCCTGGCATAACAATATTCGCGCCGAGCTGTGGCGCAAGCTGGCAGTCAACTGCGTGATTAATCCACTGACTGCCATCTGGAATTGCCCGAACGGTGAATTACGTCATCATCCGCAAGAAATTATGCAGATATGCGAAGAAGTCGCGGCGGTGATCGAACGCGAAGGGCATCATACTTCAGCAGAAGATTTGCGTGATTACGTGATGCAGGTGATTGATGCCACAGCGGAAAATATCTCGTCGATGTTGCAGGATATCCGCGCGCTGCGCCACACTGAAATCGACTATATCAATGGTTTTCTCTTACGCCGCGCCCGCGCGCATGGGATTGCCGTACCGGAAAACACCCGCCTGTTTGAAATGGTAAAAAGAAAGGAGAGTGAATATGAGCGCATCGGCACTGGTTTGCCTCGCCCCTGGTAG", - 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], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8E7" - ], - [ - "gene_synonym", - "JW5058" - ], - [ - "gene_synonym", - "ASAP:ABE-0001478" - ] - ], - "dna_sequence": "ATGCCATCTTTCGATATTGTCTCTGAAGTTGATCTTCAGGAAGCACGTAACGCGGTCGATAACGCGAGCCGCGAAGTGGAGTCCCGTTTTGACTTCCGTAACGTTGAAGCCTCATTTGAGCTGAACGACGCCAGCAAAACCATCAAAGTGTTGAGCGAGTCCGATTTCCAGGTCAATCAGTTGCTGGATATTCTGCGTGCCAAGCTGCTGAAGCGCGGCATTGAAGGCAGTTCGCTGGATGTACCGGAGAATATCGTTCATAGCGGTAAAACCTGGTTTGTGGAAGCGAAACTGAAACAGGGCATTGAGAGCGCGACCCAGAAGAAAATCGTCAAGATGATCAAAGACAGCAAACTGAAAGTGCAGGCGCAAATTCAGGGCGATGAAATCCGCGTAACGGGCAAATCTCGTGATGATTTGCAGGCTGTCATGGCGATGGTACGTGGTGGCGATCTCGGTCAGCCGTTCCAGTTCAAAAACTTCCGCGATTAA", - "dna_sequence_length": 492, - "functions": [ - "phage Phi6 host factor, ATP/GTP binding protein" - ], - "id": "CDS_419", - "location": [ - [ - "NC_000913", - 444683, - "+", - 492 - ] - ], - "md5": "f1ef294c7815b925751b1355403009fe", - "parent_gene": "", - "protein_md5": "43b40eec41574e304aeb711bfdc83b82", - "protein_translation": "MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDASKTIKVLSESDFQVNQLLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGIESATQKKIVKMIKDSKLKVQAQIQGDEIRVTGKSRDDLQAVMAMVRGGDLGQPFQFKNFRD", - "protein_translation_length": 163, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0427" - ], - [ - "gene_synonym", - "NP_414961.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77726" - ], - [ - "gene_synonym", - "ECK0421" - ], - [ - "gene_synonym", - "EcoGene:EG13614" - ], - [ - "gene_synonym", - "yajR" - ], - [ - "gene_synonym", - "GI:90111133" - ], - [ - "gene_synonym", - "JW5059" - ], - [ - "gene_synonym", - "ASAP:ABE-0001481" - ], - [ - "gene_synonym", - "GeneID:945058" - ] - ], - "dna_sequence": "ATGAACGATTATAAAATGACGCCAGGTGAGAGGCGCGCGACCTGGGGTTTAGGGACCGTATTCTCGTTGCGCATGCTGGGCATGTTTATGGTTCTGCCGGTTCTGACCACGTACGGCATGGCTCTGCAAGGTGCCAGCGAAGCATTAATCGGTATTGCCATTGGTATTTATGGTCTGACTCAGGCCGTTTTTCAGATTCCGTTTGGCCTGCTTTCCGACCGCATTGGTCGCAAACCATTAATTGTCGGTGGGCTGGCGGTGTTTGCCGCCGGTAGCGTTATCGCTGCGCTTTCCGACTCCATCTGGGGAATTATTCTGGGCCGGGCGCTACAAGGCTCTGGAGCAATTGCCGCCGCCGTTATGGCGCTGCTTTCCGATCTCACGCGCGAACAAAACCGCACCAAAGCGATGGCGTTTATCGGCGTGAGCTTTGGCATTACCTTTGCCATTGCGATGGTGCTTGGCCCGATCATCACTCACAAACTTGGGCTGCACGCGCTGTTCTGGATGATCGCTATTCTGGCAACGACCGGCATTGCGTTGACCATTTGGGTTGTGCCCAACAGTAGCACTCACGTACTTAATCGTGAGTCCGGAATGGTGAAAGGCAGTTTCAGTAAAGTGCTGGCGGAACCGCGGCTGCTGAAACTCAACTTTGGCATTATGTGTCTGCATATTTTGCTGATGTCGACGTTTGTTGCCCTGCCCGGACAACTGGCTGATGCAGGGTTCCCGGCGGCTGAACACTGGAAGGTCTATCTGGCGACAATGCTAATCGCCTTTGGCTCGGTCGTGCCTTTCATTATCTACGCTGAAGTTAAGCGCAAAATGAAGCAAGTCTTTGTCTTCTGCGTCGGGTTGATCGTGGTTGCGGAAATTGTGTTGTGGAACGCGCAAACGCAGTTCTGGCAACTGGTGGTCGGCGTGCAGCTTTTCTTTGTGGCGTTTAATTTGATGGAAGCCCTCCTGCCCTCACTTATCAGTAAAGAGTCGCCAGCAGGTTACAAAGGTACGGCGATGGGTGTTTACTCCACCAGCCAGTTTCTTGGCGTGGCGATTGGCGGTTCGCTGGGCGGCTGGATTAACGGCATGTTTGACGGTCAGGGGGTATTTCTCGCTGGCGCAATGCTGGCCGCAGTGTGGCTGACAGTCGCCAGTACCATGAAAGAACCGCCGTATGTCAGCAGTTTGCGCATTGAAATCCCGGCGAACATTGCCGCAAACGAGGCGTTAAAAGTGCGTTTGCTAGAAACTGAAGGCATCAAAGAAGTGTTGATTGCAGAAGAAGAACATTCAGCTTATGTGAAAATCGACAGCAAAGTGACGAATCGCTTTGAGATAGAACAGGCAATTCGTCAGGCATAA", 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"gene_synonym", - "GI:16128413" - ], - [ - "gene_synonym", - "b0428" - ], - [ - "gene_synonym", - "NP_414962.1" - ], - [ - "gene_synonym", - "JW0418" - ], - [ - "gene_synonym", - "ASAP:ABE-0001484" - ], - [ - "gene_synonym", - "EcoGene:EG10182" - ], - [ - "gene_synonym", - "cyoE" - ] - ], - "dna_sequence": "ATGATGTTTAAGCAATACCTGCAAGTAACGAAACCAGGCATCATCTTTGGCAACCTGATCTCGGTGATTGGGGGATTCCTGCTGGCCTCAAAGGGCAGCATTGATTATCCCCTGTTTATCTACACGCTGGTTGGGGTGTCACTGGTTGTGGCGTCGGGTTGTGTGTTTAACAACTACATCGACAGGGATATCGACAGAAAGATGGAAAGGACGAAGAATCGGGTGCTGGTGAAAGGCCTGATCTCTCCTGCTGTCTCGCTGGTGTACGCCACGTTGCTGGGTATTGCTGGCTTTATGCTGCTGTGGTTTGGCGCGAATCCGCTGGCCTGCTGGCTGGGGGTGATGGGCTTTGTGGTTTATGTCGGCGTTTATAGCCTGTACATGAAACGCCACTCTGTCTACGGCACGTTGATTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGATCCTGCTGGCTATCTTCAGCCTGTGGCAGATGCCTCACTCCTATGCCATCGCCATTTTCCGCTTTAAGGATTACCAGGCGGCAAACATTCCGGTATTGCCAGTGGTAAAAGGCATTTCGGTGGCGAAGAATCACATCACGCTGTATATCATCGCCTTTGCCGTTGCCACGCTGATGCTCTCTCTTGGCGGTTACGCTGGGTATAAATATCTGGTGGTCGCCGCGGCGGTTAGCGTCTGGTGGTTAGGTATGGCTCTGCGCGGTTATAAAGTTGCTGATGACAGAATCTGGGCGCGCAAGCTGTTCGGCTTCTCTATCATCGCCATCACTGCCCTCTCGGTGATGATGTCCGTTGATTTTATGGTACCGGACTCGCATACGCTGCTGGCTGCTGTGTGGTAA", - "dna_sequence_length": 891, - "functions": [ - "protoheme IX farnesyltransferase" - ], - "id": 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[ - "gene_synonym", - "cyoD" - ] - ], - "dna_sequence": "ATGAGTCATTCTACCGATCACAGCGGCGCGTCCCATGGCAGCGTAAAAACCTACATGACAGGCTTTATCCTGTCGATCATTCTGACGGTGATTCCGTTCTGGATGGTGATGACAGGAGCTGCCTCTCCGGCCGTAATTCTGGGAACAATCCTGGCAATGGCAGTGGTACAGGTTCTGGTGCATCTGGTGTGCTTCCTGCACATGAATACCAAATCAGATGAAGGCTGGAACATGACGGCGTTTGTCTTCACCGTGCTAATCATCGCTATCCTGGTTGTAGGCTCCATCTGGATTATGTGGAACCTCAACTACAACATGATGATGCACTAA", - "dna_sequence_length": 330, - "functions": [ - "cytochrome o ubiquinol oxidase subunit IV" - ], - "id": "CDS_422", - "location": [ - [ - "NC_000913", - 448046, - "-", - 330 - ] - ], - "md5": "05cf5454dec4ca0ff0f6997b6e4192ab", - "parent_gene": "", - "protein_md5": "0716002e1951c2c2400be1af5dd06537", - "protein_translation": "MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPAVILGTILAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNLNYNMMMH", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001491" - ], - [ - "gene_synonym", - "ECK0424" - ], - [ - "gene_synonym", - "GeneID:946897" - ], - [ - "gene_synonym", - "b0430" - ], - [ - "gene_synonym", - "NP_414964.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABJ3" - ], - [ - "gene_synonym", - "GI:16128415" - ], - [ - "gene_synonym", - "JW0420" - ], - [ - "gene_synonym", - "EcoGene:EG10180" - ], - [ - "gene_synonym", - "cyoC" - ] - ], - "dna_sequence": "ATGGCAACTGATACTTTGACGCACGCGACTGCCCACGCGCACGAACACGGGCACCACGATGCAGGCGGAACCAAAATCTTCGGATTTTGGATCTACCTGATGAGCGACTGCATTCTGTTCTCTATCTTGTTTGCTACCTATGCCGTTCTGGTGAACGGCACCGCAGGCGGCCCGACAGGTAAGGACATTTTCGAACTGCCGTTCGTTCTGGTTGAAACTTTCTTGCTGTTGTTCAGCTCCATCACCTACGGCATGGCGGCTATCGCCATGTACAAAAACAACAAAAGCCAGGTTATCTCCTGGCTGGCGTTGACCTGGTTGTTTGGTGCCGGATTTATCGGGATGGAAATCTATGAATTCCATCACCTGATTGTTAACGGCATGGGTCCGGATCGCAGCGGCTTCCTGTCAGCGTTCTTTGCGCTGGTCGGCACGCACGGTCTGCACGTCACTTCTGGTCTTATCTGGATGGCGGTGCTGATGGTGCAAATCGCCCGTCGCGGCCTGACCAGCACTAACCGTACCCGCATCATGTGCCTGAGCCTGTTCTGGCACTTCCTGGATGTGGTTTGGATCTGTGTGTTCACTGTTGTTTATCTGATGGGGGCGATGTAA", - "dna_sequence_length": 615, - "functions": [ - "cytochrome o ubiquinol oxidase subunit III" - ], - "id": "CDS_423", - "location": [ - [ - "NC_000913", - 448660, - "-", - 615 - ] - ], - "md5": "d9d662ec28876f760ab5370e31151317", - "parent_gene": "", - "protein_md5": "8404e23b100d4aba614871681fcc1a72", - "protein_translation": "MATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILFATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMYKNNKSQVISWLALTWLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVLMVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM", - "protein_translation_length": 204, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0425" - ], - [ - "gene_synonym", - "b0431" - ], - [ - "gene_synonym", - "GI:16128416" - ], - [ - "gene_synonym", - "GeneID:945615" - ], - [ - "gene_synonym", - "JW0421" - ], - [ - "gene_synonym", - "EcoGene:EG10179" - ], - [ - "gene_synonym", - "ASAP:ABE-0001493" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABI8" - ], - [ - "gene_synonym", - "NP_414965.1" - ], - [ - "gene_synonym", - "cyoB" - ] - ], - "dna_sequence": "ATGTTCGGAAAATTATCACTTGATGCAGTCCCGTTCCATGAACCTATCGTCATGGTTACGATCGCTGGCATTATTTTGGGAGGTCTGGCGCTCGTTGGCCTGATCACTTACTTCGGTAAGTGGACCTACCTGTGGAAAGAGTGGCTGACCTCCGTCGACCATAAACGCCTCGGTATCATGTATATCATCGTGGCGATTGTGATGTTGCTGCGTGGTTTTGCTGACGCCATTATGATGCGTAGCCAGCAGGCTCTTGCCTCGGCGGGCGAAGCGGGCTTCCTGCCACCTCACCACTACGATCAGATCTTTACCGCGCACGGCGTGATTATGATCTTCTTCGTGGCGATGCCTTTCGTTATCGGTCTGATGAACCTGGTGGTTCCGCTGCAGATCGGCGCGCGTGACGTTGCGTTCCCGTTCCTCAACAACTTAAGCTTCTGGTTTACCGTTGTTGGTGTGATTCTGGTTAACGTTTCTCTCGGCGTGGGCGAATTTGCGCAGACCGGCTGGCTGGCCTATCCACCGCTATCGGGAATAGAGTACAGTCCGGGAGTCGGTGTCGATTACTGGATATGGAGTCTCCAGCTATCCGGTATAGGTACGACGCTTACCGGTATCAACTTCTTCGTTACCATTCTGAAGATGCGCGCACCGGGCATGACCATGTTCAAGATGCCAGTATTTACCTGGGCATCACTGTGCGCGAACGTACTGATTATTGCTTCCTTCCCAATTCTGACGGTTACCGTCGCGTTGTTGACCCTGGATCGCTATCTGGGCACCCATTTCTTTACCAACGATATGGGTGGCAACATGATGATGTACATCAACCTGATTTGGGCCTGGGGCCACCCGGAAGTTTACATCCTGATCCTGCCTGTTTTCGGTGTGTTCTCCGAAATTGCGGCAACCTTCTCGCGTAAACGTCTGTTTGGTTATACCTCGCTGGTATGGGCAACCGTCTGTATCACCGTGCTGTCGTTCATCGTTTGGCTGCACCACTTCTTTACGATGGGTGCGGGCGCGAACGTAAACGCCTTCTTTGGTATCACCACAATGATTATCGCCATCCCGACCGGGGTGAAGATCTTCAACTGGCTGTTCACCATGTATCAGGGCCGCATCGTGTTCCATTCTGCGATGCTGTGGACCATCGGTTTTATCGTCACCTTCTCGGTGGGCGGGATGACTGGCGTGCTGCTGGCCGTACCGGGCGCGGACTTCGTTCTGCATAACAGCCTGTTCCTGATTGCGCACTTCCATAACGTGATCATCGGCGGCGTGGTCTTCGGCTGCTTCGCAGGGATGACCTACTGGTGGCCTAAAGCGTTCGGTTTCAAACTGAACGAAACCTGGGGTAAACGCGCGTTCTGGTTCTGGATCATCGGCTTCTTCGTTGCCTTTATGCCACTGTATGCGCTGGGCTTCATGGGCATGACCCGTCGTTTGAGCCAGCAGATTGACCCGCAGTTCCACACCATGCTGATGATTGCAGCCAGCGGTGCAGTACTGATTGCGCTGGGTATTCTCTGCCTCGTTATTCAGATGTACGTTTCTATTCGCGACCGCGACCAGAACCGTGACCTGACTGGCGACCCGTGGGGTGGCCGTACGCTGGAGTGGGCAACCTCTTCCCCGCCTCCGTTCTATAACTTTGCCGTAGTGCCGCACGTTCACGAACGTGATGCATTCTGGGAAATGAAAGAGAAAGGCGAAGCGTATAAAAAGCCTGACCACTATGAAGAAATTCATATGCCGAAAAACAGCGGTGCAGGTATCGTCATTGCAGCTTTCTCCACCATCTTCGGTTTCGCCATGATCTGGCATATCTGGTGGCTGGCGATTGTTGGCTTCGCAGGCATGATCATCACCTGGATCGTGAAAAGCTTCGACGAGGACGTGGATTACTACGTGCCGGTGGCAGAAATCGAAAAACTGGAAAACCAGCATTTCGATGAGATTACTAAGGCAGGGCTGAAAAATGGCAACTGA", 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"protein_translation_length": 663, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0426" - ], - [ - "gene_synonym", - "b0432" - ], - [ - "gene_synonym", - "GI:16128417" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABJ1" - ], - [ - "gene_synonym", - "GeneID:945080" - ], - [ - "gene_synonym", - "EcoGene:EG10178" - ], - [ - "gene_synonym", - "JW0422" - ], - [ - "gene_synonym", - "NP_414966.1" - ], - [ - "gene_synonym", - "cyoA" - ], - [ - "gene_synonym", - "ASAP:ABE-0001495" - ] - ], - "dna_sequence": "ATGAGACTCAGGAAATACAATAAAAGTTTGGGATGGTTGTCATTATTTGCAGGCACTGTATTGCTCAGTGGCTGTAATTCTGCGCTGTTAGATCCCAAAGGACAGATTGGTCTGGAGCAACGTTCACTGATACTGACGGCATTTGGCCTGATGTTGATTGTCGTTATTCCCGCAATCTTGATGGCTGTTGGTTTCGCCTGGAAGTACCGTGCGAGCAATAAAGATGCTAAGTACAGCCCGAACTGGTCACACTCCAATAAAGTGGAAGCTGTGGTCTGGACGGTACCTATCTTAATCATCATCTTCCTTGCAGTACTGACCTGGAAAACCACTCACGCTCTTGAGCCTAGCAAGCCGCTGGCACACGACGAGAAGCCCATTACCATCGAAGTGGTTTCCATGGACTGGAAATGGTTCTTCATCTACCCGGAACAGGGCATTGCTACCGTGAATGAAATCGCTTTCCCGGCGAACACTCCGGTGTACTTCAAAGTGACCTCCAACTCCGTGATGAACTCCTTCTTCATTCCGCGTCTGGGTAGCCAGATTTATGCCATGGCCGGTATGCAGACTCGCCTGCATCTGATCGCCAACGAACCCGGCACTTATGACGGTATCTCCGCCAGCTACAGCGGCCCGGGCTTCTCAGGCATGAAGTTCAAAGCTATTGCAACACCGGATCGCGCCGCATTCGACCAGTGGGTCGCAAAAGCGAAGCAGTCGCCGAACACCATGTCTGACATGGCTGCGTTCGAAAAACTGGCCGCGCCTAGCGAATACAACCAGGTGGAATATTTCTCCAACGTGAAACCAGACTTGTTTGCCGATGTAATTAACAAGTTTATGGCTCACGGTAAGAGCATGGACATGACCCAGCCAGAAGGTGAGCACAGCGCACACGAAGGTATGGAAGGCATGGACATGAGCCACGCGGAATCCGCCCATTAA", - "dna_sequence_length": 948, - "functions": [ - "cytochrome o ubiquinol oxidase subunit II" - ], - "id": "CDS_425", - "location": [ - [ - "NC_000913", - 451610, - "-", - 948 - ] - ], - "md5": "8ec52a341cd8d4fa76b4b654aac55371", - "parent_gene": "", - "protein_md5": "925c1148bd9b451cefa9b48d96afa4ef", - "protein_translation": "MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLILTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGMKFKAIATPDRAAFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFADVINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAESAH", - "protein_translation_length": 315, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12183" - ], - [ - "gene_synonym", - "ECK0427" - ], - [ - "gene_synonym", - "ASAP:ABE-0001501" - ], - [ - "gene_synonym", - "b0433" - ], - [ - "gene_synonym", - "GI:16128418" - ], - [ - "gene_synonym", - "NP_414967.1" - ], - [ - "gene_synonym", - "ampG" - ], - [ - "gene_synonym", - "JW0423" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE16" - ], - [ - "gene_synonym", - "GeneID:946438" - ] - ], - "dna_sequence": "ATGTCCAGTCAATATTTACGTATTTTTCAACAGCCGCGTTCAGCCATATTGCTGATCCTGGGTTTTGCTTCCGGGCTACCGCTCGCCCTGACATCCGGTACCTTACAGGCCTGGATGACGGTCGAGAATATCGATCTCAAAACCATTGGTTTCTTCTCTCTGGTAGGCCAGGCTTACGTTTTTAAATTCCTCTGGTCACCGCTGATGGACCGCTACACGCCTCCATTTTTTGGGCGGCGGCGCGGTTGGCTGCTCGCCACGCAAATCCTGTTATTAGTCGCCATTGCGGCGATGGGTTTTCTCGAACCAGGCACCCAACTCCGCTGGATGGCGGCGCTGGCAGTGGTGATCGCTTTTTGCTCTGCTTCCCAGGATATAGTCTTCGATGCGTGGAAAACCGATGTGCTTCCGGCAGAAGAACGTGGTGCGGGCGCGGCAATCAGCGTGCTGGGTTACCGTTTAGGGATGCTGGTTTCCGGCGGCCTAGCCCTGTGGCTGGCAGATAAATGGCTGGGCTGGCAGGGCATGTACTGGTTAATGGCGGCACTGTTGATCCCCTGTATTATCGCGACGTTGCTTGCACCAGAACCAACCGACACCATTCCTGTGCCCAAAACGCTGGAACAAGCGGTTGTTGCACCTCTGCGAGATTTCTTTGGTCGCAATAATGCCTGGCTTATTTTGCTTCTTATCGTGCTGTATAAGCTGGGCGACGCATTCGCCATGAGCCTGACAACCACGTTTTTGATTCGCGGCGTCGGGTTTGATGCGGGTGAAGTAGGCGTGGTTAACAAAACGCTTGGCTTACTAGCGACCATTGTTGGCGCATTGTACGGTGGGATTTTGATGCAGCGCCTGTCACTGTTCCGGGCACTGCTGATTTTCGGCATTTTACAAGGTGCGTCTAACGCCGGTTACTGGCTGCTGTCGATTACTGATAAGCATCTCTACAGCATGGGCGCAGCCGTCTTTTTCGAAAACCTCTGTGGCGGGATGGGCACATCAGCCTTTGTCGCGCTGTTAATGACGCTATGTAATAAGTCATTTTCCGCTACTCAATTTGCCCTGCTCTCAGCGCTTTCTGCTGTAGGGCGAGTTTATGTCGGCCCCGTGGCGGGTTGGTTTGTTGAAGCACACGGCTGGTCGACATTCTATCTATTCTCCGTCGCCGCTGCCGTACCAGGGCTTATTTTGCTGCTGGTTTGCCGCCAGACGCTTGAATATACACGAGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGGCGGCGGGCGTCAGCCTGTTGGCCGTGTGGTTACTGCTATTGACGATGGACGCGCTGGATTTGACGCACTTCTCTTTCCTGCCTGCTCTGCTGGAAGTCGGGGTTTTAGTCGCCCTTTCTGGCGTCGTGCTTGGTGGTTTGCTGGATTATCTGGCGCTACGAAAAACGCATCTGACGTAA", - "dna_sequence_length": 1476, - "functions": [ - "muropeptide transporter" - ], - "id": "CDS_426", - "location": [ - [ - "NC_000913", - 453545, - "-", - 1476 - ] - ], - "md5": "1b8605fd5886f114bf0f67ab36ef98de", - "parent_gene": "", - "protein_md5": "85fc465b9030eba1ce9ecdb1f2b5e057", - "protein_translation": "MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLEPGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGTSAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAAVPGLILLLVCRQTLEYTRVNDNFISRTAYPAGYAFAMWTLAAGVSLLAVWLLLLTMDALDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT", - "protein_translation_length": 491, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12182" - ], - [ - "gene_synonym", - "b0434" - ], - [ - "gene_synonym", - "ASAP:ABE-0001504" - ], - [ - "gene_synonym", - "GeneID:945521" - ], - [ - "gene_synonym", - "GI:90111134" - ], - [ - "gene_synonym", - "ECK0428" - ], - [ - "gene_synonym", - "JW0424" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADA5" - ], - [ - "gene_synonym", - "NP_414968.4" - ], - [ - "gene_synonym", - "yajG" - ] - ], - "dna_sequence": "ATGTTCAAAAAAATCCTCTTCCCGTTAGTTGCTCTGTTTATGCTTGCAGGATGCGCAAAACCGCCAACAACTATTGAAGTTTCCCCGACGATTACACTGCCACAGCAGGATCCAAGCCTGATGGGCGTCACCGTAAGCATTAATGGTGCCGATCAGCGTACCGATCAGGCGCTGGCAAAAGTCACCCGCGATAATCAAATCGTTACCCTGACCGCCTCCCGCGATCTGCGTTTCCTGCTGCAAGAAGTGCTGGAAAAACAGATGACCGCGCGTGGTTACATGGTTGGTCCGAATGGCCCGGTTAATCTGCAAATCATCGTTAGCCAACTGTATGCTGACGTGTCCCAGGGCAACGTGCGCTACAACATCGCGACCAAAGCGGATATCGCCATCATCGCTACCGCGCAGAATGGCAACAAAATGACCAAAAACTATCGTGCCAGCTACAACGTTGAAGGTGCGTTCCAGGCCTCCAACAAAAATATCGCCGATGCGGTTAACAGTGTGCTGACCGATACCATCGCTGATATGTCTCAGGACACCAGCATCCACGAATTCATCAAGCAGAACGCGCGTTAA", - "dna_sequence_length": 579, - "functions": [ - "putative lipoprotein" - ], - "id": "CDS_427", - "location": [ - [ - "NC_000913", - 454167, - "-", - 579 - ] - ], - "md5": "a704c8d4400e294198f9b6be2ab1cb63", - "parent_gene": "", - "protein_md5": "787304e09e3cef09c640759772fd43e4", - "protein_translation": "MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVTVSINGADQRTDQALAKVTRDNQIVTLTASRDLRFLLQEVLEKQMTARGYMVGPNGPVNLQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKMTKNYRASYNVEGAFQASNKNIADAVNSVLTDTIADMSQDTSIHEFIKQNAR", - "protein_translation_length": 192, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "bolA" - ], - [ - "gene_synonym", - "EcoGene:EG10125" - ], - [ - "gene_synonym", - "b0435" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABE2" - ], - [ - "gene_synonym", - "GI:90111135" - ], - [ - "gene_synonym", - "ECK0429" - ], - [ - "gene_synonym", - "GeneID:947043" - ], - [ - "gene_synonym", - "NP_414969.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0001508" - ], - [ - "gene_synonym", - "JW5060" - ] - ], - "dna_sequence": "ATGATGATACGTGAGCGGATAGAAGAAAAATTAAGGGCGGCGTTCCAACCCGTATTCCTCGAAGTAGTGGATGAAAGCTATCGTCACAATGTCCCAGCCGGCTCTGAAAGCCATTTTAAAGTTGTGCTGGTCAGCGATCGTTTTACGGGTGAACGTTTTCTGAATCGTCATCGAATGATTTACAGTACTTTAGCGGAGGAACTCTCTACTACCGTTCATGCGCTGGCTCTGCATACTTACACTATTAAGGAGTGGGAAGGGTTGCAGGACACCGTCTTTGCCTCTCCTCCCTGTCGTGGAGCAGGAAGCATCGCGTAA", - "dna_sequence_length": 318, - "functions": [ - "stationary-phase morphogene, transcriptional repressor for mreB", - "also regulator for dacA, dacC, and ampC" - ], - "id": "CDS_428", - "location": [ - [ - "NC_000913", - 454472, - "+", - 318 - ] - ], - "md5": "b626990ab9fefcca5e2a2ce030f9884d", - "parent_gene": "", - "protein_md5": "a3aebedd25ddedfe1ade83d1e8475627", - "protein_translation": "MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLVSDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQDTVFASPPCRGAGSIA", - "protein_translation_length": 105, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0436" - ], - [ - "gene_synonym", - "ASAP:ABE-0001511" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A850" - ], - [ - "gene_synonym", - "GeneID:945081" - ], - [ - "gene_synonym", - "EcoGene:EG11003" - ], - [ - "gene_synonym", - "NP_414970.1" - ], - [ - "gene_synonym", - "GI:16128421" - ], - [ - "gene_synonym", - "JW0426" - ], - [ - "gene_synonym", - "ECK0430" - ], - [ - "gene_synonym", - "tig" - ] - ], - "dna_sequence": "ATGCAAGTTTCAGTTGAAACCACTCAAGGCCTTGGCCGCCGTGTAACGATTACTATCGCTGCTGACAGCATCGAGACCGCTGTTAAAAGCGAGCTGGTCAACGTTGCGAAAAAAGTACGTATTGACGGCTTCCGCAAAGGCAAAGTGCCAATGAATATCGTTGCTCAGCGTTATGGCGCGTCTGTACGCCAGGACGTTCTGGGTGACCTGATGAGCCGTAACTTCATTGACGCCATCATTAAAGAAAAAATCAATCCGGCTGGCGCACCGACTTATGTTCCGGGCGAATACAAGCTGGGTGAAGACTTCACTTACTCTGTAGAGTTTGAAGTTTATCCGGAAGTTGAACTGCAGGGTCTGGAAGCGATCGAAGTTGAAAAACCGATCGTTGAAGTGACCGACGCTGACGTTGACGGCATGCTGGATACTCTGCGTAAACAGCAGGCGACCTGGAAAGAAAAAGACGGCGCTGTTGAAGCAGAAGACCGCGTAACCATCGACTTCACCGGTTCTGTAGACGGCGAAGAGTTCGAAGGCGGTAAAGCGTCTGATTTCGTACTGGCGATGGGCCAGGGTCGTATGATCCCGGGCTTTGAAGACGGTATCAAAGGCCACAAAGCTGGCGAAGAGTTCACCATCGACGTGACCTTCCCGGAAGAATACCACGCAGAAAACCTGAAAGGTAAAGCAGCGAAATTCGCTATCAACCTGAAGAAAGTTGAAGAGCGTGAACTGCCGGAACTGACTGCAGAATTCATCAAACGTTTCGGCGTTGAAGATGGTTCCGTAGAAGGTCTGCGCGCTGAAGTGCGTAAAAACATGGAGCGCGAGCTGAAGAGCGCCATCCGTAACCGCGTTAAGTCTCAGGCGATCGAAGGTCTGGTAAAAGCTAACGACATCGACGTACCGGCTGCGCTGATCGACAGCGAAATCGACGTTCTGCGTCGCCAGGCTGCACAGCGTTTCGGTGGCAACGAAAAACAAGCTCTGGAACTGCCGCGCGAACTGTTCGAAGAACAGGCTAAACGCCGCGTAGTTGTTGGCCTGCTGCTGGGCGAAGTTATCCGCACCAACGAGCTGAAAGCTGACGAAGAGCGCGTGAAAGGCCTGATCGAAGAGATGGCTTCTGCGTACGAAGATCCGAAAGAAGTTATCGAGTTCTACAGCAAAAACAAAGAACTGATGGACAACATGCGCAATGTTGCTCTGGAAGAACAGGCTGTTGAAGCTGTACTGGCGAAAGCGAAAGTGACTGAAAAAGAAACCACTTTCAACGAGCTGATGAACCAGCAGGCGTAA", - "dna_sequence_length": 1299, - "functions": [ - "peptidyl-prolyl cis/trans isomerase (trigger factor)" - ], - "id": "CDS_429", - "location": [ - [ - "NC_000913", - 455133, - "+", - 1299 - ] - ], - "md5": "12ccb2eca1d238b42ba08f139fa2e94e", - "parent_gene": "", - "protein_md5": "be175fae90c64d4e251742b3a98a8abe", - "protein_translation": "MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGEDFTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA", - "protein_translation_length": 432, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001515" - ], - [ - "gene_synonym", - "b0437" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6G7" - ], - [ - "gene_synonym", - "lopP" - ], - [ - "gene_synonym", - "clpP" - ], - [ - "gene_synonym", - "GeneID:945082" - ], - [ - "gene_synonym", - "wseA" - ], - [ - "gene_synonym", - "NP_414971.1" - ], - [ - "gene_synonym", - "GI:16128422" - ], - [ - "gene_synonym", - "JW0427" - ], - [ - "gene_synonym", - "ECK0431" - ], - [ - "gene_synonym", - "EcoGene:EG10158" - ] - ], - "dna_sequence": "ATGTCATACAGCGGCGAACGAGATAACTTTGCACCCCATATGGCGCTGGTGCCGATGGTCATTGAACAGACCTCACGCGGTGAGCGCTCTTTTGATATCTATTCTCGTCTACTTAAGGAACGCGTCATTTTTCTGACTGGCCAGGTTGAAGACCACATGGCTAACCTGATTGTGGCGCAGATGCTGTTCCTGGAAGCGGAAAACCCAGAAAAAGATATCTATCTGTACATTAACTCCCCAGGCGGGGTGATCACTGCCGGGATGTCTATCTATGACACCATGCAGTTTATCAAGCCTGATGTCAGCACCATCTGTATGGGCCAGGCGGCCTCGATGGGCGCTTTCTTGCTGACCGCAGGGGCAAAAGGTAAACGTTTTTGCCTGCCGAATTCGCGCGTGATGATTCACCAACCGTTGGGCGGCTACCAGGGCCAGGCGACCGATATCGAAATTCATGCCCGTGAAATTCTGAAAGTTAAAGGGCGCATGAATGAACTTATGGCGCTTCATACGGGTCAATCATTAGAACAGATTGAACGTGATACCGAGCGCGATCGCTTCCTTTCCGCCCCTGAAGCGGTGGAATACGGTCTGGTCGATTCGATTCTGACCCATCGTAATTGA", - "dna_sequence_length": 624, - "functions": [ - "proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases" - ], - "id": "CDS_430", - "location": [ - [ - "NC_000913", - 456677, - "+", - 624 - ] - ], - "md5": "a04fb072d6281eda2a6b9228c9c71503", - "parent_gene": "", - "protein_md5": "c80cda9efd4d78c152403bd0ab9e6143", - "protein_translation": "MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN", - "protein_translation_length": 207, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "clpX" - ], - [ - "gene_synonym", - "ASAP:ABE-0001517" - ], - [ - "gene_synonym", - "EcoGene:EG10159" - ], - [ - "gene_synonym", - "NP_414972.1" - ], - [ - "gene_synonym", - "GeneID:945083" - ], - [ - "gene_synonym", - "b0438" - ], - [ - "gene_synonym", - "GI:16128423" - ], - [ - "gene_synonym", - "lopC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6H1" - ], - [ - "gene_synonym", - "JW0428" - ], - [ - "gene_synonym", - "ECK0432" - ] - ], - "dna_sequence": "ATGACAGATAAACGCAAAGATGGCTCAGGCAAATTGCTGTATTGCTCTTTTTGCGGCAAAAGCCAGCATGAAGTGCGCAAGCTGATTGCCGGTCCATCCGTGTATATCTGCGACGAATGTGTTGATTTATGTAACGACATCATTCGCGAAGAGATTAAAGAAGTTGCACCGCATCGTGAACGCAGTGCGCTACCGACGCCGCATGAAATTCGCAACCACCTGGACGATTACGTTATCGGCCAGGAACAGGCGAAAAAAGTGCTGGCGGTCGCGGTATACAACCATTACAAACGTCTGCGCAACGGCGATACCAGCAATGGCGTCGAGTTGGGCAAAAGTAACATTCTGCTGATCGGTCCGACCGGTTCCGGTAAAACGCTGCTGGCTGAAACGCTGGCGCGCCTGCTGGATGTTCCGTTCACCATGGCCGACGCGACTACACTGACCGAAGCCGGTTATGTGGGTGAAGACGTTGAAAACATCATTCAGAAGCTGTTGCAGAAATGCGACTACGATGTCCAGAAAGCACAGCGTGGTATTGTCTACATCGATGAAATCGACAAGATTTCTCGTAAGTCAGACAACCCGTCCATTACCCGAGACGTTTCCGGTGAAGGCGTACAGCAGGCACTGTTGAAACTGATCGAAGGTACGGTAGCTGCTGTTCCACCGCAAGGTGGGCGTAAACATCCGCAGCAGGAATTCTTGCAGGTTGATACCTCTAAGATCCTGTTTATTTGTGGCGGTGCGTTTGCCGGTCTGGATAAAGTGATTTCCCACCGTGTAGAAACCGGCTCCGGCATTGGTTTTGGCGCGACGGTAAAAGCGAAGTCCGACAAAGCAAGCGAAGGCGAGCTGCTGGCGCAGGTTGAACCGGAAGATCTGATCAAGTTTGGTCTTATCCCTGAGTTTATTGGTCGTCTGCCGGTTGTCGCAACGTTGAATGAACTGAGCGAAGAAGCTCTGATTCAGATCCTCAAAGAGCCGAAAAACGCCCTGACCAAGCAGTATCAGGCGCTGTTTAATCTGGAAGGCGTGGATCTGGAATTCCGTGACGAGGCGCTGGATGCTATCGCTAAGAAAGCGATGGCGCGTAAAACCGGTGCCCGTGGCCTGCGTTCCATCGTAGAAGCCGCACTGCTCGATACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAA", 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"gene_synonym", - "GeneID:945085" - ], - [ - "gene_synonym", - "EcoGene:EG10542" - ], - [ - "gene_synonym", - "lon" - ], - [ - "gene_synonym", - "capR" - ], - [ - "gene_synonym", - "b0439" - ], - [ - "gene_synonym", - "GI:16128424" - ], - [ - "gene_synonym", - "lopA" - ], - [ - "gene_synonym", - "JW0429" - ], - [ - "gene_synonym", - "ECK0433" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9M0" - ], - [ - "gene_synonym", - "ASAP:ABE-0001521" - ], - [ - "gene_synonym", - "dir" - ], - [ - "gene_synonym", - "deg" - ] - ], - "dna_sequence": "ATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGTCTGGAAGCGGCGATGGACCATGATAAAAAAATTATGCTGGTCGCGCAGAAAGAAGCTTCAACGGATGAGCCGGGTGTAAACGATCTTTTCACCGTCGGGACCGTGGCCTCTATATTGCAGATGCTGAAACTGCCTGACGGCACCGTCAAAGTGCTGGTCGAGGGGTTACAGCGCGCGCGTATTTCTGCGCTCTCTGACAATGGCGAACACTTTTCTGCGAAGGCGGAGTATCTGGAGTCGCCGACCATTGATGAGCGGGAACAGGAAGTGCTGGTGCGTACTGCAATCAGCCAGTTCGAAGGCTACATCAAGCTGAACAAAAAAATCCCACCAGAAGTGCTGACGTCGCTGAATAGCATCGACGATCCGGCGCGTCTGGCGGATACCATTGCTGCACATATGCCGCTGAAACTGGCTGACAAACAGTCTGTTCTGGAGATGTCCGACGTTAACGAACGTCTGGAATATCTGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCGATGTCGGCAGAAGCGACCGTAGTGCGTGGTTATATCGACTGGATGGTACAGGTGCCGTGGAATGCGCGTAGCAAGGTCAAAAAAGACCTGCGTCAGGCGCAGGAAATCCTTGATACCGACCATTATGGTCTGGAGCGCGTGAAAGATCGAATCCTTGAGTATCTTGCGGTTCAAAGCCGTGTCAACAAAATCAAGGGACCGATCCTCTGCCTGGTAGGGCCGCCGGGGGTAGGTAAAACCTCTCTTGGTCAGTCCATTGCCAAAGCCACCGGGCGTAAATATGTCCGTATGGCGCTGGGCGGCGTGCGTGATGAAGCGGAAATCCGTGGTCACCGCCGTACTTACATCGGTTCTATGCCGGGTAAACTGATCCAGAAAATGGCGAAAGTGGGCGTGAAAAACCCGCTGTTCCTGCTCGATGAGATCGACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTATGGAAGTGATTCGCCTCTCCGGTTATACCGAAGATGAAAAACTGAACATCGCCAAACGTCACCTGCTGCCGAAGCAGATTGAACGTAATGCACTGAAAAAAGGTGAGCTGACCGTCGACGATAGCGCCATTATCGGCATTATTCGTTACTACACCCGTGAGGCGGGCGTGCGTGGTCTGGAGCGTGAAATCTCCAAACTGTGTCGCAAAGCGGTTAAGCAGTTACTGCTCGATAAGTCATTAAAACATATCGAAATTAACGGCGATAACCTGCATGACTATCTCGGTGTTCAGCGTTTCGACTATGGTCGCGCGGATAACGAAAACCGTGTCGGTCAGGTAACCGGTCTGGCGTGGACGGAAGTGGGCGGTGACTTGCTGACCATTGAAACCGCATGTGTTCCGGGTAAAGGCAAACTGACCTATACCGGTTCGCTCGGCGAAGTGATGCAGGAGTCCATTCAGGCGGCGTTAACGGTGGTTCGTGCGCGTGCGGAAAAACTGGGGATCAACCCTGATTTTTACGAAAAACGTGACATCCACGTCCACGTACCGGAAGGTGCGACGCCGAAAGATGGTCCGAGTGCCGGTATTGCTATGTGCACCGCGCTGGTTTCTTGCCTGACCGGTAACCCGGTTCGTGCCGATGTGGCAATGACCGGTGAGATCACTCTGCGTGGTCAGGTACTGCCGATCGGTGGTTTGAAAGAAAAACTCCTGGCAGCGCATCGCGGCGGGATTAAAACAGTGCTAATTCCGTTCGAAAATAAACGCGATCTGGAAGAGATTCCTGACAACGTAATTGCCGATCTGGACATTCATCCTGTGAAGCGCATTGAGGAAGTTCTGACTCTGGCGCTGCAAAATGAACCGTCTGGTATGCAGGTTGTGACTGCAAAATAG", 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"MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPARLADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLKHIEINGDNLHDYLGVQRFDYGRADNENRVGQVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVTAK", - "protein_translation_length": 784, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hupB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACF4" - ], - [ - "gene_synonym", - "NP_414974.1" - ], - [ - "gene_synonym", - "GI:16128425" - ], - [ - "gene_synonym", - "EcoGene:EG10467" - ], - [ - "gene_synonym", - "JW0430" - ], - [ - "gene_synonym", - "dpeA" - ], - [ - "gene_synonym", - "b0440" - ], - [ - "gene_synonym", - "GeneID:949095" - ], - [ - "gene_synonym", - "ASAP:ABE-0001527" - ], - [ - "gene_synonym", - "ECK0434" - ], - [ - "gene_synonym", - "hopD" - ] - ], - "dna_sequence": "GTGAATAAATCTCAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCAACCCGCAGACCGGTAAAGAGATCACCATCGCTGCTGCTAAAGTACCGAGCTTCCGTGCAGGTAAAGCACTGAAAGACGCGGTAAACTAA", - "dna_sequence_length": 273, - "functions": [ - "HU, DNA-binding transcriptional regulator, beta subunit" - ], - "id": "CDS_433", - "location": [ - [ - "NC_000913", - 461451, - "+", - 273 - ] - ], - "md5": "07f961da3806a711015aa00a7d9b723a", - "parent_gene": "", - "protein_md5": "f008373a488a46c105e95fdfb99fa95a", - "protein_translation": "MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN", - "protein_translation_length": 90, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946056" - ], - [ - "gene_synonym", - "EcoGene:EG13249" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADY1" - ], - [ - "gene_synonym", - "GI:16128426" - ], - [ - "gene_synonym", - "JW0431" - ], - [ - "gene_synonym", - "NP_414975.1" - ], - [ - "gene_synonym", - "b0441" - ], - [ - "gene_synonym", - "ppiD" - ], - [ - "gene_synonym", - "ECK0435" - ], - [ - "gene_synonym", - "ASAP:ABE-0001531" - ], - [ - "gene_synonym", - "ybaU" - ] - ], - "dna_sequence": "ATGATGGACAGCTTACGCACGGCTGCAAACAGTCTCGTGCTCAAGATTATTTTCGGTATCATTATCGTGTCGTTCATATTGACCGGCGTGAGTGGTTACCTGATTGGCGGAGGCAATAACTACGCCGCAAAAGTGAATGACCAGGAAATCAGCCGTGGGCAATTCGAGAACGCCTTCAACAGCGAGCGTAATCGCATGCAGCAACAGCTGGGCGATCAATACTCCGAGCTGGCAGCGAACGAAGGCTATATGAAAACCCTGCGTCAACAGGTGCTGAATCGTCTGATCGACGAGGCGCTGCTGGATCAGTACGCACGTGAGCTGAAACTGGGTATCAGCGATGAGCAGGTTAAACAGGCGATTTTCGCGACCCCAGCCTTCCAGGTTGACGGCAAATTTGATAACAGCCGCTATAACGGTATCCTCAACCAGATGGGGATGACCGCCGATCAGTACGCCCAGGCGCTGCGTAACCAGCTCACTACCCAACAGCTGATTAACGGCGTTGCCGGTACCGATTTTATGCTGAAAGGTGAAACCGACGAGCTGGCGGCACTGGTCGCGCAACAACGCGTGGTGCGTGAGGCGACTATCGATGTTAACGCGCTGGCGGCGAAGCAGCCTGTGACCGAACAGGAGATTGCCAGCTACTACGAACAAAACAAAAACAATTTCATGACGCCGGAACAATTCCGCGTGAGTTACATCAAGCTGGATGCCGCAACGATGCAGCAACCGGTTAGCGATGCGGATATCCAGAGCTACTACGACCAGCATCAGGATCAATTCACCCAGCCGCAGCGTACCCGCTACAGCATCATCCAGACCAAAACTGAAGATGAAGCGAAAGCGGTACTTGATGAGCTGAATAAAGGCGGTGATTTTGCTGCATTAGCCAAAGAAAAATCTGCCGATATTATCTCTGCTCGTAACGGCGGCGATATGGGTTGGTTAGAAGATGCCACTATCCCGGACGAACTGAAAAATGCTGGTCTGAAAGAAAAAGGCCAACTGTCTGGTGTCATCAAATCTTCGGTCGGTTTCCTGATTGTACGTCTGGACGACATTCAGCCAGCGAAAGTGAAATCGTTAGACGAAGTACGTGACGACATTGCGGCGAAAGTGAAACACGAAAAAGCCCTCGATGCGTACTACGCGCTGCAGCAGAAAGTGAGCGATGCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTCAGGAACAAGTTAAGGCATTGGTTCAGCACAACAAAGCTGAACAACAGGCGAAAGTGGATGCTGAGAAACTGCTGGTTGATTTGAAAGCCGGCAAAGGTGCGGAAGCTATGCAGGCTGCCGGTCTGAAATTTGGCGAGCCGAAAACCTTAAGCCGTTCCGGTCGTGACCCGATTAGCCAGGCGGCGTTTGCACTGCCACTGCCAGCGAAAGACAAACCGAGCTACGGTATGGCGACCGATATGCAAGGTAATGTGGTTCTGCTGGCGCTGGATGAAGTGAAACAAGGTTCAATGCCGGAAGATCAGAAAAAAGCGATGGTGCAGGGTATCACCCAGAACAACGCACAAATCGTCTTTGAAGCTCTGATGAGTAACCTGCGTAAAGAGGCGAAAATCAAAATTGGCGATGCGCTGGAACAGCAATAA", - "dna_sequence_length": 1872, - "functions": [ - "periplasmic folding chaperone, has an inactive PPIase domain" - ], - "id": "CDS_434", - "location": [ - [ - "NC_000913", - 461915, - "+", - 1872 - ] - ], - "md5": "3511a15e9a805fb3e22fd4d2d8918d3e", - "parent_gene": "", - "protein_md5": "6107950a8bfdc532059d2b072baf9356", - "protein_translation": "MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAKVNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLDQYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQLTTQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYYEQNKNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQTKTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKEKGQLSGVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVSDAASNDTESLAGAEQAAGVKATQTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPGINSDIITVDGDRAFVLRISEHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLVDLKAGKGAEAMQAAGLKFGEPKTLSRSGRDPISQAAFALPLPAKDKPSYGMATDMQGNVVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIVFEALMSNLRKEAKIKIGDALEQQ", - "protein_translation_length": 623, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13250" - ], - [ - "gene_synonym", - "GI:16128427" - ], - [ - "gene_synonym", - "GeneID:945884" - ], - [ - "gene_synonym", - "JW0432" - ], - [ - "gene_synonym", - "b0442" - ], - [ - "gene_synonym", - "NP_414976.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001534" - ], - [ - "gene_synonym", - "ybaV" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAR8" - ], - [ - "gene_synonym", - "ECK0436" - ] - ], - "dna_sequence": "ATGAAACACGGAATTAAAGCACTGCTCATTACCCTGTCCCTGGCCTGTGCCGGAATGTCTCATAGCGCGCTGGCGGCAGCTTCTGTGGCGAAACCGACGGCGGTAGAAACCAAAGCGGAAGCTCCTGCAGCACAAAGTAAAGCAGCAGTACCGGCGAAAGCCAGTGACGAAGAAGGCACCCGGGTCAGCATTAATAATGCCAGCGCGGAAGAGCTAGCCCGCGCGATGAATGGCGTTGGCCTGAAGAAAGCGCAGGCGATTGTCAGTTATCGCGAAGAGTACGGTCCGTTTAAAACTGTGGAGGATCTAAAGCAGGTGCCGGGGATGGGCAATTCGCTGGTGGAACGTAATCTGGCGGTATTAACCCTGTAA", - "dna_sequence_length": 372, - "functions": [ - "putative competence-suppressing periplasmic helix-hairpin-helix DNA-binding protein" - ], - "id": "CDS_435", - "location": [ - [ - "NC_000913", - 463937, - "+", - 372 - ] - ], - "md5": "5d36a6b7c2dc14c58dacc961b64e3bdb", - "parent_gene": "", - "protein_md5": "2477d7b9334dff9d96e1432da8410d67", - "protein_translation": "MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAAQSKAAVPAKASDEEGTRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVEDLKQVPGMGNSLVERNLAVLTL", - "protein_translation_length": 123, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13251" - ], - [ - "gene_synonym", - "NP_414977.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77712" - ], - [ - "gene_synonym", - "tesC" - ], - [ - "gene_synonym", - "JW0433" - ], - [ - "gene_synonym", - "b0443" - ], - [ - "gene_synonym", - "fadM" - ], - [ - "gene_synonym", - "ASAP:ABE-0001537" - ], - [ - "gene_synonym", - "GeneID:945812" - ], - [ - "gene_synonym", - "ybaW" - ], - [ - "gene_synonym", - "ECK0437" - ], - [ - "gene_synonym", - "GI:16128428" - ] - ], - "dna_sequence": "ATGCAAACACAAATCAAAGTTCGTGGATATCATCTCGACGTTTACCAGCACGTCAACAACGCCCGCTACCTTGAATTTCTCGAAGAAGCCCGCTGGGATGGGTTGGAAAATAGCGACAGTTTTCAGTGGATGACGGCCCATAACATCGCCTTCGTCGTGGTCAATATCAATATTAACTATCGTCGCCCAGCGGTATTAAGTGACCTGTTAACTATTACCAGTCAGTTGCAGCAATTAAACGGTAAAAGCGGCATCTTAAGCCAGGTCATTACACTGGAGCCGGAAGGGCAGGTGGTAGCGGATGCGCTTATTACGTTTGTTTGTATTGATCTTAAAACGCAGAAAGCATTAGCTCTGGAAGGGGAATTGCGCGAAAAGCTGGAGCAGATGGTTAAGTAA", - "dna_sequence_length": 399, - "functions": [ - "long-chain acyl-CoA thioesterase III" - ], - "id": "CDS_436", - "location": [ - [ - "NC_000913", - 464402, - "+", - 399 - ] - ], - "md5": "7a43b07c2164dfa55491c17aea587125", - "parent_gene": "", - "protein_md5": "14cb24435dc8036ccb3f450aa3bf50ec", - "protein_translation": "MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWMTAHNIAFVVVNININYRRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADALITFVCIDLKTQKALALEGELREKLEQMVK", - "protein_translation_length": 132, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77756" - ], - [ - "gene_synonym", - "queC" - ], - [ - "gene_synonym", - "GeneID:947034" - ], - [ - "gene_synonym", - "ASAP:ABE-0001539" - ], - [ - "gene_synonym", - "NP_414978.1" - ], - [ - "gene_synonym", - "EcoGene:EG13252" - ], - [ - "gene_synonym", - "ECK0438" - ], - [ - "gene_synonym", - "ybaX" - ], - [ - "gene_synonym", - "b0444" - ], - [ - "gene_synonym", - "JW0434" - ], - [ - "gene_synonym", - "GI:16128429" - ] - ], - "dna_sequence": "ATGAAACGTGCTGTCGTTGTGTTCAGTGGAGGTCAGGATTCCACCACCTGTCTGGTGCAGGCATTACAACAATATGATGAAGTCCATTGCGTGACGTTCGATTACGGTCAGCGGCATCGCGCAGAAATCGACGTGGCACGCGAACTGGCGCTGAAACTGGGGGCACGCGCGCATAAGGTGCTGGATGTCACCCTGCTCAACGAGCTGGCGGTCAGTAGCCTGACGCGTGACAGCATTCCGGTGCCTGATTATGAACCTGAAGCCGATGGTATCCCGAATACGTTTGTCCCAGGGCGTAATATTTTGTTCCTGACGCTGGCGGCAATATATGCGTATCAGGTAAAAGCAGAAGCCGTAATTACTGGCGTCTGCGAAACGGATTTCTCCGGCTACCCGGATTGCCGCGATGAGTTTGTGAAAGCACTAAACCATGCCGTCAGTTTGGGCATGGCGAAAGATATTCGTTTTGAAACGCCGCTGATGTGGATTGATAAAGCGGAAACCTGGGCGCTGGCAGATTATTACGGCAAACTGGATTTAGTCCGTAACGAAACGTTGACCTGCTATAACGGCTTTAAAGGCGACGGTTGCGGTCATTGTGCGGCATGTAATTTACGCGCCAACGGTTTGAATCATTATCTGGCCGATAAACCGACGGTGATGGCAGCGATGAAGCAGAAAACCGGGTTGAGGTAA", - "dna_sequence_length": 696, - "functions": [ - "7-cyano-7-deazaguanine (preQ0) synthase", - "queuosine biosynthesis" - ], - "id": "CDS_437", - "location": [ - [ - "NC_000913", - 465547, - "-", - 696 - ] - ], - "md5": "40288c9b3b349b1eab9bf211f8887e7b", - "parent_gene": "", - "protein_md5": "e016ac1429a3f688333e890176de2690", - "protein_translation": "MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEIDVARELALKLGARAHKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNILFLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPLMWIDKAETWALADYYGKLDLVRNETLTCYNGFKGDGCGHCAACNLRANGLNHYLADKPTVMAAMKQKTGLR", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_414979.1" - ], - [ - "gene_synonym", - "EcoGene:EG13217" - ], - [ - "gene_synonym", - "ybaE" - ], - [ - "gene_synonym", - "ECK0439" - ], - [ - "gene_synonym", - "b0445" - ], - [ - "gene_synonym", - "GI:16128430" - ], - [ - "gene_synonym", - "JW0435" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46890" - ], - [ - "gene_synonym", - "ASAP:ABE-0001542" - ], - [ - "gene_synonym", - "GeneID:949093" - ] - ], - "dna_sequence": "ATGCGATTGCTCAACCGTCTTAACCAGTATCAACGTCTGTGGCAACCTTCCGCCGGAAAGCCGCAAACCGTCACCGTCAGCGAACTGGCCGAACGCTGTTTTTGCAGCGAACGCCATGTTCGTACGCTGTTGCGTCAGGCACAGGAGGCGGGATGGCTGGAGTGGCAGGCGCAGTCAGGACGCGGAAAGCGCGGACAATTACGCTTTCTGGTCACGCCGGAATCGCTACGCAATGCGATGATGGAACAGGCACTGGAAACCGGAAAGCAGCAAGATGTGCTGGAGCTGGCGCAACTGGCCCCAGGTGAGCTGCGCACTCTGTTACAGCCGTTTATGGGCGGACAATGGCAAAACGATACACCCACGTTGCGTATTCCCTACTATCGCCCGCTCGAACCGCTACAACCAGGCTTTTTGCCCGGCCGTGCCGAGCAGCATCTCGCCGGGCAGATATTTTCCGGCCTGACCCGCTTCGATAATAATACTCAGCGCCCGATTGGCGATTTAGCGCATCACTGGGAAACCTCTACTGACGGGTTACGCTGGGACTTTTATCTTCGTTCAACCCTACACTGGCATAACGGCGATGCAGTAAAAGCCTCACACTTACACCAGCGATTATTGATGCTGTTACAACTGCCAGCACTGGATCAATTATTTATTAGCGTGAAGCGTATTGAAGTCACCCATCCGCAGTGTCTGACCTTCTTTTTACATCGCCCTGATTACTGGCTTGCGCACCGGCTGGCGAGCTATTGCAGCCATCTGGCGCATCCGCAATTCCCACTGATCGGCACGGGTCCTTTTCGCTTAACACAATTCACAGCAGAGCTGGTGCGCCTGGAAAGCCATGATTATTACCATTTACGTCATCCGCTGCTTAAAGCGGTTGAGTACTGGATAACTCCGCCGCTTTTCGAAAAAGATTTGGGAACCAGTTGTCGGCATCCCGTGCAAATCACCATCGGCAAACCGGAGGAGCTGCAACGGGTCAGCCAGGTCAGTAGCGGCATCAGTTTAGGTTTTTGCTATTTGACGTTGCGCAAAAGTCCCCGACTCTCCCTCTGGCAGGCGCGAAAAGTGATCTCCATTATTCATCAATCCGGTTTATTACAAACGTTAGAAGTCGGAGAAAACCTGATCACCGCCAGTCATGCATTACTGCCAGGCTGGACTATTCCGCATTGGCAGGTACCGGATGAAGTCAAACTACCGAAAACCTTGACGCTGGTTTATCACCTACCGATAGAACTTCATACCATGGCAGAACGCCTACAGGCGACACTGGCAGCGGAAGGCTGTGAACTCACAATTATTTTTCATAACGCAAAAAACTGGGACGACACGACCCTACAGGCACACGCAGACCTCATGATGGGCGACAGATTAATTGGCGAAGCACCGGAATATACTCTGGAGCAATGGCTGCGCTGCGATCCGCTGTGGCCACATGTTTTCGACGCTCCAGCATACGCACATCTACAATCGACACTGGATGCCGTGCAAATAATGCCTGATGAAGAAAACCGATTTAATGCCCTGAAAGCGGTTTTTAGCCAGTTAATGACAGATGCGACGCTGACGCCGCTGTTCAACTATCACTATCGCATTAGTGCCCCTCCCGGCGTGAACGGTGTGCGACTGACACCGCGCGGCTGGTTTGAATTTACCGAAGCCTGGCTTCCCGCGCCATCGCAATGA", - "dna_sequence_length": 1701, - "functions": [ - "putative ABC transporter periplasmic binding protein" - ], - "id": "CDS_438", - "location": [ - [ - "NC_000913", - 467312, - "-", - 1701 - ] - ], - "md5": "675f0b7199d4537fecd1d673192de085", - "parent_gene": "", - "protein_md5": "691aaa4d560b5b382c886b4b7167d284", - "protein_translation": "MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRNAMMEQALETGKQQDVLELAQLAPGELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDNNTQRPIGDLAHHWETSTDGLRWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQLFISVKRIEVTHPQCLTFFLHRPDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTAELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQVSSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWTIPHWQVPDEVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTTLQAHADLMMGDRLIGEAPEYTLEQWLRCDPLWPHVFDAPAYAHLQSTLDAVQIMPDEENRFNALKAVFSQLMTDATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAWLPAPSQ", - "protein_translation_length": 566, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0440" - ], - [ - "gene_synonym", - "GeneID:945089" - ], - [ - "gene_synonym", - "GI:90111136" - ], - [ - "gene_synonym", - "EcoGene:EG13216" - ], - [ - "gene_synonym", - "NP_414980.2" - ], - [ - "gene_synonym", - "b0446" - ], - [ - "gene_synonym", - "JW0436" - ], - [ - "gene_synonym", - "cof" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46891" - ], - [ - "gene_synonym", - "ASAP:ABE-0001548" - ] - ], - "dna_sequence": "ATGGCTCGTCTGGCAGCATTTGATATGGATGGCACTTTATTGATGCCCGACCATCATTTAGGTGAGAAAACCCTCTCTACTTTGGCGCGACTGCGTGAACGCGACATTACCCTCACTTTTGCCACGGGGCGTCATGCGCTGGAGATGCAGCATATTCTCGGGGCGCTATCGCTGGATGCGTATTTGATTACCGGCAACGGAACGCGCGTGCATTCTCTGGAAGGTGAACTTTTACATCGTGATGATTTACCTGCGGATGTCGCGGAGCTGGTGCTGTATCAGCAATGGGATACCCGAGCCAGCATGCATATCTTCAATGACGACGGTTGGTTTACCGGGAAAGAGATCCCTGCGTTGTTGCAGGCATTTGTCTATAGCGGTTTTCGTTATCAGATAATCGATGTCAAAAAAATGCCACTCGGCAGCGTCACCAAGATCTGCTTCTGTGGCGATCACGACGATCTTACACGCTTGCAGATCCAGCTATACGAAGCATTAGGCGAGCGTGCACATTTGTGTTTTTCCGCCACGGATTGCCTCGAAGTGCTGCCGGTGGGCTGCAATAAAGGCGCTGCATTGACGGTGCTGACCCAACATTTAGGTTTATCGTTGCGCGATTGCATGGCCTTTGGTGATGCGATGAACGATCGCGAAATGTTAGTCAGCGTCGGTAGCGGATTTATTATGGGCAATGCGATGCCGCAACTGCGCGCGGAGCTCCCGCATTTACCGGTGATTGGACATTGCCGAAATCAGGCTGTCTCTCACTATTTGACGCACTGGCTGGACTATCCACATCTACCTTATTCCCCCGAATAA", - "dna_sequence_length": 819, - "functions": [ - "thiamine pyrimidine pyrophosphate hydrolase", - "HMP-PP phosphatase" - ], - "id": "CDS_439", - "location": [ - [ - "NC_000913", - 467412, - "+", - 819 - ] - ], - "md5": "3ff9f46d5fd8c08a95ad5609e7daba59", - "parent_gene": "", - "protein_md5": "6a868667be2f869d1f5a3adeb0eca635", - "protein_translation": "MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDREMLVSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE", - "protein_translation_length": 272, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0441" - ], - [ - "gene_synonym", - "EcoGene:EG13218" - ], - [ - "gene_synonym", - "NP_414981.4" - ], - [ - "gene_synonym", - "GI:90111137" - ], - [ - "gene_synonym", - "GeneID:945091" - ], - [ - "gene_synonym", - "b0447" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACJ5" - ], - [ - "gene_synonym", - "grp?" - ], - [ - "gene_synonym", - "JW0437" - ], - [ - "gene_synonym", - "ASAP:ABE-0001553" - ], - [ - "gene_synonym", - "ybaO" - ] - ], - "dna_sequence": "ATGTTAGATAAAATTGACCGTAAGCTGCTGGCCTTACTGCAGCAGGATTGCACCCTCTCTTTGCAGGCACTGGCTGAAGCCGTTAATCTGACAACCACCCCTTGCTGGAAGCGCCTGAAACGGCTGGAGGACGACGGTATCCTTATCGGCAAAGTCGCCCTGCTGGATCCGGAAAAAATAGGCCTCGGCCTGACCGCTTTTGTGCTGATAAAAACGCAACATCACAGCAGCGAATGGTATTGCCGCTTTGTCACGGTGGTTACCGAAATGCCAGAAGTGCTGGGGTTCTGGCGCATGGCTGGTGAATACGATTATCTGATGCGCGTCCAGGTTGCCGACATGAAACGCTACGACGAGTTTTATAAGCGTCTGGTAAACAGCGTGCCGGGGCTGTCGGACGTCACTTCCAGCTTCGCGATGGAACAGATTAAATACACCACTTCTTTACCCATCGAATAA", - "dna_sequence_length": 459, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_440", - "location": [ - [ - "NC_000913", - 468383, - "+", - 459 - ] - ], - "md5": "e3f41d39073b7b09eef89480e17e144d", - "parent_gene": "", - "protein_md5": "fec718c80e00354a5a4a825b5ad0a9e8", - "protein_translation": "MLDKIDRKLLALLQQDCTLSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKIGLGLTAFVLIKTQHHSSEWYCRFVTVVTEMPEVLGFWRMAGEYDYLMRVQVADMKRYDEFYKRLVNSVPGLSDVTSSFAMEQIKYTTSLPIE", - "protein_translation_length": 152, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0442" - ], - [ - "gene_synonym", - "mdl" - ], - [ - "gene_synonym", - "EcoGene:EG11622" - ], - [ - "gene_synonym", - "mdlA" - ], - [ - "gene_synonym", - "GeneID:945092" - ], - [ - "gene_synonym", - "GI:16128433" - ], - [ - "gene_synonym", - "JW0438" - ], - [ - "gene_synonym", - "b0448" - ], - [ - "gene_synonym", - "ASAP:ABE-0001555" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77265" - ], - [ - "gene_synonym", - "NP_414982.1" - ] - ], - "dna_sequence": "GTGCGATTATTTGCTCAATTAAGCTGGTATTTCCGTCGGGAATGGCGTCGCTATCTCGGGGCTGTCGCCTTGCTTGTCATTATCGCGATGCTGCAACTGGTTCCGCCAAAAGTGGTTGGTATTGTTGTCGATGGCGTGACAGAACAACACTTTACTACCGGGCAGATCCTGATGTGGATCGCCACCATGGTGCTGATTGCCGTTGTGGTTTATCTCCTGCGTTACGTCTGGCGGGTATTGCTGTTTGGTGCGTCTTATCAACTGGCTGTTGAACTGCGTGAAGATTATTACCGTCAGCTAAGCCGGCAGCATCCTGAGTTTTACCTGCGTCATCGCACCGGTGACCTCATGGCTCGTGCGACCAATGACGTCGATCGCGTCGTGTTTGCCGCCGGAGAAGGGGTGCTGACGCTGGTGGATTCACTGGTGATGGGCTGCGCTGTGTTGATTATGATGTCTACGCAAATTAGCTGGCAGTTGACCTTATTTTCCCTGTTGCCGATGCCAGTGATGGCGATCATGATTAAGCGCAACGGCGATGCTTTGCATGAACGCTTTAAGCTGGCACAGGCGGCGTTTTCCAGTCTTAATGACCGCACCCAGGAAAGCCTCACCAGTATCCGCATGATCAAAGCCTTTGGTCTGGAAGATCGCCAGTCGGCGTTATTTGCCGCGGATGCCGAAGATACCGGCAAAAAAAACATGCGGGTGGCGCGTATTGATGCTCGTTTCGACCCGACCATCTATATCGCGATTGGTATGGCGAACTTGCTGGCGATTGGCGGCGGTAGTTGGATGGTGGTGCAGGGCAGTTTAACGCTGGGCCAGCTCACCAGTTTTATGATGTATTTAGGTCTGATGATTTGGCCAATGCTGGCGCTGGCATGGATGTTTAACATTGTGGAACGTGGTAGTGCTGCGTACAGCCGTATTCGCGCGATGCTGGCGGAAGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATATTTTGCGTCTACCGCAAGGTTACGATACAGAGGTGGGCGAGCGCGGTGTGATGCTTTCCGGCGGGCAAAAACAGCGTATCTCCATTGCTCGTGCGTTATTAGTCAACGCGGAAATCCTCATCCTTGATGATGCGCTTTCGGCGGTGGACGGACGCACTGAGCACCAGATCCTGCATAACCTGCGTCAGTGGGGGCAGGGAAGAACGGTAATCATCAGTGCCCATCGCCTTTCTGCACTGACGGAAGCCAGTGAAATTATTGTGATGCAGCACGGACATATCGCCCAGCGTGGCAATCATGATGTGCTGGCACAACAAAGCGGCTGGTATCGCGATATGTATCGCTATCAACAACTGGAGGCGGCGCTCGACGACGCTCCGGAAAATCGCGAGGAGGCCGTCGATGCGTAG", 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- [ - "gene_synonym", - "ECK0443" - ], - [ - "gene_synonym", - "mdl" - ], - [ - "gene_synonym", - "GeneID:945088" - ], - [ - "gene_synonym", - "mdlB" - ], - [ - "gene_synonym", - "EcoGene:EG14374" - ], - [ - "gene_synonym", - "GI:16128434" - ], - [ - "gene_synonym", - "NP_414983.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAG5" - ], - [ - "gene_synonym", - "ASAP:ABE-0001557" - ], - [ - "gene_synonym", - "b0449" - ], - [ - "gene_synonym", - "JW5061" - ] - ], - "dna_sequence": "ATGCGTAGTTTTAGCCAACTGTGGCCGACTCTCAAGCGCCTGTTAGCGTACGGTTCGCCGTGGCGTAAACCGCTGGGGATTGCGGTCCTGATGATGTGGGTTGCGGCGGCGGCAGAAGTCAGTGGGCCGCTGCTTATCAGCTATTTTATCGACAATATGGTAGCGAAAAATAACCTGCCGTTGAAAGTGGTTGCAGGGCTGGCTGCGGCGTATGTTGGGCTGCAACTGTTTGCCGCCGGGCTACATTACGCGCAGTCGCTGCTGTTTAATCGGGCGGCAGTAGGCGTAGTGCAACAGTTGCGTACCGACGTGATGGATGCTGCGTTACGCCAGCCATTAAGCGAGTTTGATACCCAACCCGTCGGGCAGGTGATTTCCCGCGTCACTAATGACACTGAAGTGATCCGCGATCTCTACGTTACCGTAGTGGCAACTGTCCTGCGCAGTGCCGCGCTGGTGGGCGCGATGCTGGTGGCGATGTTCAGCCTCGACTGGCGAATGGCACTGGTGGCGATAATGATTTTCCCGGTGGTGCTGGTGGTAATGGTGATATACCAGCGTTACAGCACGCCGATTGTCCGTCGTGTGCGCGCCTATTTGGCGGATATCAACGACGGCTTTAACGAAATCATCAATGGCATGAGCGTTATCCAGCAGTTTCGTCAGCAGGCGCGATTTGGCGAACGTATGGGGGAGGCCAGTCGTTCACACTATATGGCGAGGATGCAAACCCTGCGCCTCGACGGTTTTCTGCTGCGTCCGCTGCTGAGTCTGTTTTCATCGCTCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATTGAAGTGGGCGTGCTGTATGCGTTTATCAGCTATCTTGGGCGACTTAACGAACCATTAATCGAACTGACCACGCAACAGGCGATGCTGCAACAGGCTGTTGTTGCTGGTGAGCGCGTGTTTGAACTGATGGACGGACCGCGCCAGCAATATGGCAATGATGATCGCCCGTTACAGAGTGGCACCATCGAAGTCGATAACGTGTCATTTGCTTATCGCGATGACAATCTGGTGCTAAAGAACATTAATCTCTCTGTGCCTTCGCGCAATTTTGTGGCGCTGGTCGGGCATACCGGCAGTGGCAAAAGCACCCTCGCCAGTTTATTGATGGGCTATTACCCGCTAACGGAAGGTGAGATTCGCCTTGATGGTCGTCCATTAAGTTCGCTAAGTCACAGCGCGCTGCGCCAGGGCGTGGCAATGGTGCAGCAAGATCCGGTGGTGCTGGCGGATACCTTCCTCGCCAACGTGACGCTGGGGCGGGATATCTCCGAAGAACGCGTCTGGCAGGCGCTGGAAACCGTGCAACTGGCGGAGCTGGCGCGTAGCATGAGCGACGGTATTTACACGCCGCTGGGCGAGCAGGGGAATAATCTCTCAGTTGGGCAAAAGCAACTGCTGGCACTGGCGCGCGTGCTGGTCGAGACGCCGCAAATCCTGATCCTTGATGAGGCAACCGCCAGCATTGACTCCGGTACTGAACAGGCGATTCAACATGCTCTGGCGGCGGTGCGTGAACATACCACGCTGGTAGTGATTGCTCACCGCTTATCGACCATTGTTGATGCCGACACCATTCTGGTGCTTCATCGTGGGCAAGCCGTGGAGCAGGGCACTCACCAGCAACTGCTGGCGGCCCAGGGACGCTACTGGCAGATGTATCAACTGCAACTTGCGGGCGAAGAGCTGGCAGCCAGCGTGCGTGAAGAGGAATCATTGAGCGCCTGA", 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"aliases": [ - [ - "gene_synonym", - "glnK" - ], - [ - "gene_synonym", - "EcoGene:EG12191" - ], - [ - "gene_synonym", - "ybaI" - ], - [ - "gene_synonym", - "ECK0444" - ], - [ - "gene_synonym", - "GeneID:945087" - ], - [ - "gene_synonym", - "NP_414984.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC55" - ], - [ - "gene_synonym", - "b0450" - ], - [ - "gene_synonym", - "GI:16128435" - ], - [ - "gene_synonym", - "ASAP:ABE-0001562" - ], - [ - "gene_synonym", - "JW0440" - ] - ], - "dna_sequence": "ATGAAGCTGGTGACCGTGATAATCAAACCATTCAAGCTGGAAGACGTTCGTGAAGCGTTATCTTCCATTGGTATTCAGGGCCTGACCGTCACCGAAGTGAAAGGTTTCGGGCGTCAGAAAGGGCATGCCGAGCTGTACCGGGGGGCGGAATACAGCGTCAATTTCCTGCCAAAAGTAAAAATTGATGTGGCGATTGCTGATGACCAACTCGATGAAGTGATCGATATCGTCAGTAAGGCGGCTTACACCGGAAAAATTGGCGACGGCAAAATCTTCGTCGCTGAATTGCAACGCGTCATTCGTATTCGTACCGGCGAAGCCGACGAAGCGGCGCTGTAA", - "dna_sequence_length": 339, - "functions": [ - "nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB" - ], - "id": "CDS_443", - "location": [ - [ - "NC_000913", - 472598, - "+", - 339 - ] - ], - "md5": "74b1efa6c441ec61b118293654520720", - "parent_gene": "", - "protein_md5": "2c10f8c51446d7159794c9595ed25026", - "protein_translation": "MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL", - "protein_translation_length": 112, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0445" - ], - [ - "gene_synonym", - "GeneID:945084" - ], - [ - "gene_synonym", - "NP_414985.1" - ], - [ - "gene_synonym", - "ybaG" - ], - [ - "gene_synonym", - "b0451" - ], - [ - "gene_synonym", - "GI:16128436" - ], - [ - "gene_synonym", - "ASAP:ABE-0001564" - ], - [ - "gene_synonym", - "JW0441" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69681" - ], - [ - "gene_synonym", - "EcoGene:EG11821" - ], - [ - "gene_synonym", - "amtB" - ] - ], - "dna_sequence": "ATGAAGATAGCGACGATAAAAACTGGGCTTGCTTCACTGGCGATGCTTCCGGGACTGGTAATGGCTGCACCTGCGGTGGCCGATAAAGCCGACAATGCGTTTATGATGATTTGTACTGCGCTGGTGCTGTTTATGACTATTCCGGGGATTGCCCTGTTTTACGGTGGGTTGATTCGCGGCAAAAACGTGCTGTCGATGCTGACGCAGGTGACGGTGACATTTGCACTGGTCTGTATTCTCTGGGTGGTTTACGGTTACTCGCTGGCGTTTGGTGAGGGCAACAACTTCTTCGGCAACATTAACTGGTTGATGCTGAAAAACATCGAACTGACGGCGGTGATGGGCAGCATTTATCAGTATATCCACGTGGCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGCTTCTCAGCTGTGTTGATTTTCGTGGTGGTATGGCTGACGCTCTCTTACATTCCGATTGCGCATATGGTGTGGGGCGGTGGTTTGCTGGCTTCTCACGGTGCGCTGGATTTCGCGGGTGGCACCGTGGTGCACATTAACGCCGCAATCGCCGGTCTGGTGGGCGCGTATCTGATAGGAAAACGCGTGGGCTTCGGTAAAGAGGCGTTTAAACCGCACAACCTGCCGATGGTCTTCACCGGGACTGCCATTCTCTATATCGGTTGGTTTGGCTTTAACGCCGGGTCAGCGGGCACGGCGAATGAAATCGCGGCACTGGCATTTGTGAATACTGTGGTCGCAACGGCGGCGGCAATTCTTGGCTGGATCTTCGGTGAATGGGCGCTGCGTGGTAAGCCTTCACTGCTGGGGGCGTGTTCTGGCGCGATTGCCGGTCTGGTCGGCGTGACGCCAGCCTGCGGCTACATTGGGGTTGGCGGCGCGTTGATTATCGGCGTGGTAGCTGGTCTGGCGGGCTTGTGGGGCGTTACCATGCTCAAACGCTTGCTGCGGGTGGATGATCCCTGCGATGTCTTCGGTGTGCACGGCGTTTGTGGCATTGTCGGCTGTATCATGACCGGGATTTTTGCCGCCAGCTCGCTGGGCGGCGTGGGCTTCGCTGAAGGTGTGACGATGGGCCATCAGTTGCTGGTACAGCTGGAAAGCATCGCCATTACGATCGTCTGGTCCGGTGTTGTGGCATTTATCGGCTACAAATTGGCGGATCTGACGGTTGGTCTGCGTGTACCGGAAGAGCAGGAGCGAGAAGGGCTGGATGTCAACAGCCACGGCGAGAATGCCTATAACGCGTAA", 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"gene_synonym", - "b0452" - ], - [ - "gene_synonym", - "GI:16128437" - ], - [ - "gene_synonym", - "JW0442" - ], - [ - "gene_synonym", - "ASAP:ABE-0001566" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGG2" - ], - [ - "gene_synonym", - "NP_414986.1" - ] - ], - "dna_sequence": "ATGAGTCAGGCGCTAAAAAATTTACTGACATTGTTAAATCTGGAAAAAATTGAGGAAGGACTCTTTCGCGGCCAGAGTGAAGATTTAGGTTTACGCCAGGTGTTTGGCGGCCAGGTCGTGGGTCAGGCCTTGTATGCTGCAAAAGAGACCGTCCCTGAAGAGCGGCTGGTACATTCGTTTCACAGCTACTTTCTTCGCCCTGGCGATAGTAAGAAGCCGATTATTTATGATGTCGAAACGCTGCGTGACGGTAACAGCTTCAGCGCCCGCCGGGTTGCTGCTATTCAAAACGGCAAACCGATTTTTTATATGACTGCCTCTTTCCAGGCACCAGAAGCGGGTTTCGAACATCAAAAAACAATGCCGTCCGCGCCAGCGCCTGATGGCCTCCCTTCGGAAACGCAAATCGCCCAATCGCTGGCGCACCTGCTGCCGCCAGTGCTGAAAGATAAATTCATCTGCGATCGTCCGCTGGAAGTCCGTCCGGTGGAGTTTCATAACCCACTGAAAGGTCACGTCGCAGAACCACATCGTCAGGTGTGGATCCGCGCAAATGGTAGCGTGCCGGATGACCTGCGCGTTCATCAGTATCTGCTCGGTTACGCTTCTGATCTTAACTTCCTGCCGGTAGCTCTACAGCCGCACGGCATCGGTTTTCTCGAACCGGGGATTCAGATTGCCACCATTGACCATTCCATGTGGTTCCATCGCCCGTTTAATTTGAATGAATGGCTGCTGTATAGCGTGGAGAGCACCTCGGCGTCCAGCGCACGTGGCTTTGTGCGCGGTGAGTTTTATACCCAAGACGGCGTACTGGTTGCCTCGACCGTTCAGGAAGGGGTGATGCGTAATCACAATTAA", - "dna_sequence_length": 861, - "functions": [ - "acyl-CoA thioesterase 2" - ], - "id": "CDS_445", - "location": [ - [ - "NC_000913", - 475161, - "-", - 861 - ] - ], - "md5": "5aebfc089057964f13401daa387d9f19", - "parent_gene": "", - "protein_md5": "db48d4e8f270845af318b767af7d6024", - "protein_translation": "MSQALKNLLTLLNLEKIEEGLFRGQSEDLGLRQVFGGQVVGQALYAAKETVPEERLVHSFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIFYMTASFQAPEAGFEHQKTMPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEVRPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIGFLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRNHN", - "protein_translation_length": 286, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13253" - ], - [ - "gene_synonym", - "ybaY" - ], - [ - "gene_synonym", - "GeneID:945070" - ], - [ - "gene_synonym", - "ECK0447" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77717" - ], - [ - "gene_synonym", - "b0453" - ], - [ - "gene_synonym", - "JW0443" - ], - [ - "gene_synonym", - "ASAP:ABE-0001574" - ], - [ - "gene_synonym", - "NP_414987.3" - ], - [ - "gene_synonym", - "GI:49176025" - ] - ], - "dna_sequence": "ATGAAACTCGTGCACATGGCCAGTGGTTTAGCGGTTGCGATTGCGTTGGCGGCTTGCGCAGATAAAAGCGCGGATATTCAGACGCCAGCACCGGCTGCAAATACGTCTATTTCAGCAACACAACAACCAGCTATCCAGCAACCGAATGTCTCCGGTACCGTCTGGATCCGTCAGAAAGTCGCACTGCCGCCTGATGCTGTGCTGACCGTGACACTTTCTGACGCGTCGTTAGCCGATGCACCGTCAAAAGTGCTGGCGCAGAAAGCGGTGCGTACTGAAGGTAAACAGTCACCATTCAGCTTTGTTCTGTCATTTAACCCGGCAGATGTTCAGCCGAACGCGCGTATTCTGTTGAGTGCGGCGATTACCGTGAATGACAAACTGGTATTTATCACCGATACCGTTCAGCCGGTGATCAACCAGGGCGGAACTAAAGCCGACCTGACATTGGTGCCGGTACAGCAAACCGCCGTGCCGGTTCAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCCTACGCAATATTAA", - "dna_sequence_length": 573, - "functions": [ - "outer membrane lipoprotein" - ], - "id": "CDS_446", - "location": [ - [ - "NC_000913", - 475379, - "+", - 573 - ] - ], - "md5": "793c974c024ebc2cb368b7fa08451877", - "parent_gene": "", - "protein_md5": "de43ac1b712f464cf7d68c078339839d", - "protein_translation": "MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPAIQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFVLSFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINQGGTKADLTLVPVQQTAVPVQASGGATTTVPSTSPTQVNPSSAVPAPTQY", - "protein_translation_length": 190, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13254" - ], - [ - "gene_synonym", - "ECK0448" - ], - [ - "gene_synonym", - "GeneID:945094" - ], - [ - "gene_synonym", - "ybaZ" - ], - [ - "gene_synonym", - "JW0444" - ], - [ - "gene_synonym", - "b0454" - ], - [ - "gene_synonym", - "NP_414988.1" - ], - [ - "gene_synonym", - "GI:16128439" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFP2" - ], - [ - "gene_synonym", - "ASAP:ABE-0001576" - ] - ], - "dna_sequence": "ATGCTGGTTTCTTGCGCAATGCGACTTCACTCGGGCGTTTTTCCAGATTATGCTGAAAAATTACCTCAGGAAGAAAAGATGGAAAAAGAAGATTCATTTCCCCAACGCGTCTGGCAAATCGTCGCCGCTATTCCCGAAGGCTATGTCACCACTTACGGTGATGTGGCGAAACTGGCGGGATCGCCCCGCGCCGCGCGCCAGGTGGGCGGTGTGTTAAAGCGTCTCCCTGAAGGCAGCACCTTACCCTGGCACCGGGTGGTTAATCGCCACGGCACAATTTCGCTAACCGGACCGGATTTACAGCGTCAGCGACAGGCATTACTGGCAGAAGGTGTGATGGTATCGGGAAGCGGGCAAATCGACTTGCAGCGTTATCGCTGGAACTACTAA", - "dna_sequence_length": 390, - "functions": [ - "excision repair protein, alkyltransferase-like protein ATL" - ], - "id": "CDS_447", - "location": [ - [ - "NC_000913", - 476371, - "-", - 390 - ] - ], - "md5": "a61812a1f112568929e156c0419cc882", - "parent_gene": "", - "protein_md5": "6087b77aea927d65738bb3396fb39f38", - "protein_translation": "MLVSCAMRLHSGVFPDYAEKLPQEEKMEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWNY", - "protein_translation_length": 129, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948863" - ], - [ - "gene_synonym", - "ECK0450" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAQ6" - ], - [ - "gene_synonym", - "NP_414989.1" - ], - [ - "gene_synonym", - "ybaA" - ], - [ - "gene_synonym", - "EcoGene:EG11099" - ], - [ - "gene_synonym", - "JW0445" - ], - [ - "gene_synonym", - "b0456" - ], - [ - "gene_synonym", - "ASAP:ABE-0001582" - ], - [ - "gene_synonym", - "GI:16128440" - ] - ], - "dna_sequence": "ATGAAGTATGTTGATGGTTTTGTGGTTGCCGTTCCTGCCGATAAAAAGGATGCCTATCGGGAAATGGCCGCTAAGGCTGCGCCATTGTTTAAAGAGTTTGGCGCGCTTCGTATTGTCGAATGCTGGGCCAGCGATGTACCGGATGGCAAAGTGACCGATTTTCGTATGGCGGTGAAAGCGGAAGAGAATGAAGAGGTTGTCTTTAGCTGGATTGAATACCCTTCAAAAGAGGTCCGCGACGCTGCTAATCAAAAGATGATGTCGGACCCACGGATGAAAGAGTTCGGCGAGTCCATGCCGTTTGACGGCAAGCGAATGATCTATGGCGGATTCGAGTCAATCATCGACGAATAG", - "dna_sequence_length": 354, - "functions": [ - "DUF1428 family protein" - ], - "id": "CDS_448", - "location": [ - [ - "NC_000913", - 476672, - "+", - 354 - ] - ], - "md5": "e2162aa0658bb1d5c12131312d1e5d45", - "parent_gene": "", - "protein_md5": "ddf54e2a1876bd2de0b1097122664d99", - "protein_translation": "MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWASDVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFDGKRMIYGGFESIIDE", - "protein_translation_length": 117, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0451" - ], - [ - "gene_synonym", - "GeneID:948951" - ], - [ - "gene_synonym", - "GI:90111138" - ], - [ - "gene_synonym", - "NP_414990.2" - ], - [ - "gene_synonym", - "b0457" - ], - [ - "gene_synonym", - "EcoGene:EG14237" - ], - [ - "gene_synonym", - "ylaB" - ], - [ - "gene_synonym", - "JW5062" - ], - [ - "gene_synonym", - "ASAP:ABE-0001584" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77473" - ] - ], - "dna_sequence": "GTGAGAACACGACATCTGGTCGGCCTTATTTCGGGAGTACTGATTCTTTCAGTATTGCTGCCTGTCGGCTTAAGCATCTGGCTGGCCCATCAGCAGGTAGAAACATCGTTTATTGAAGAGCTGGATACCTATTCCTCCCGCGTCGCTATTCGAGCCAATAAGGTGGCGACACAAGGGAAAGATGCGCTGCAGGAGCTGGAAAGATGGCAAGGCGCTGCCTGTAGCGAAGCCCATCTCATGGAAATGCGTCGGGTATCTTACAGTTATCGCTATATTCAGGAAGTGGCTTATATCGATAACAACGTTCCCCAGTGTTCGTCTCTGGAGCATGAAAGTCCGCCCGATACCTTCCCCGAGCCAGGTAAAATTTCGAAAGATGGTTATCGTGTCTGGTTAACATCGCATAACGATTTAGGCATTATCCGTTACATGGTCGCCATGGGAACGGCACATTATGTCGTCATGATCGACCCCGCTTCCTTTATTGATGTCATTCCCTATAGCTCATGGCAAATTGATGCCGCCATTATTGGCAATGCCCATAACGTTGTCATAACCAGCAGCGATGAAATTGCTCAGGGAATTATTACCAGGCTACAAAAAACACCCGGTGAGCATATCGAAAATAATGGAATCATTTACGATATCCTGCCCTTACCGGAGATGAATATTTCGATCATCACATGGGCTTCAACGAAAATGTTGCAGAAAGGCTGGCATCGGCAAGTCTTTATTTGGTTACCGCTCGGGTTGGTGATTGGCCTGCTGGCAGCGATGTTTGTGCTGCGTATTTTGCGCCGTATTCAGTCACCGCATCATCGGCTGCAGGATGCTATCGAAAATCGTGATATTTGCGTGCACTATCAGCCGATTGTCTCCTTAGCCAATGGCAAAATTGTCGGTGCTGAGGCACTGGCGCGCTGGCCGCAGACAGACGGTAGTTGGTTGTCACCAGATAGTTTTATTCCGCTGGCACAGCAAACGGGCCTTTCTGAGCCATTGACGCTACTGATTATAAGAAGCGTCTTTGAAGATATGGGCGACTGGCTGCGTCAGCATCCACAGCAGCATATTTCGATCAATCTTGAATCCCCCGTGCTCACCTCGGAAAAAATCCCGCAATTGCTGCGTGACATGATCAATCACTATCAGGTTAATCCCAGACAGATCGCGCTTGAACTCACTGAACGCGAGTTTGCCGATCCGAAAACCAGCGCCCCGATAATTTCTCGCTACCGGGAGGCGGGCCATGAAATTTATCTTGATGATTTTGGTACGGGGTATTCAAGTTTAAGTTATTTACAGGATCTGGATGTCGACATTCTGAAGATCGATAAATCTTTCGTTGATGCGCTGGAATATAAAAATGTCACGCCGCATATCATCGAAATGGCAAAAACACTGAAACTGAAAATGGTAGCGGAGGGAATCGAAACCAGTAAACAAGAAGAGTGGTTACGCCAGCATGGCGTGCACTACGGTCAGGGCTGGCTCTACAGCAAGGCATTACCGAAAGAAGATTTCTTACGCTGGGCCGAGCAACATTTGTGA", 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"gene_synonym", - "GI:90111139" - ], - [ - "gene_synonym", - "GeneID:948876" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAS0" - ], - [ - "gene_synonym", - "ASAP:ABE-0001587" - ], - [ - "gene_synonym", - "NP_414991.4" - ], - [ - "gene_synonym", - "EcoGene:EG14238" - ], - [ - "gene_synonym", - "b0458" - ], - [ - "gene_synonym", - "ylaC" - ], - [ - "gene_synonym", - "JW5063" - ] - ], - "dna_sequence": "ATGACCGAAATACAACGCCTGCTGACCGAAACGATTGAGTCTCTGAATACCCGCGAAAAACGCGACAACAAACCCCGCTTTAGTATCAGTTTTATCCGTAAACATCCGGGGCTGTTTATCGGTATGTACGTTGCTTTTTTTGCCACCCTGGCGGTGATGTTGCAGTCCGAAACGCTGTCAGGCTCTGTCTGGCTACTGGTTGTATTATTTATCCTGCTTAATGGTTTCTTCTTTTTCGATGTCTACCCACGCTACCGCTATGAAGATATCGACGTGCTGGATTTCCGCGTTTGCTATAACGGCGAATGGTACAACACGCGCTTTGTACCTGCCGCGCTGGTTGAAGCCATCTTGAACTCTCCGCGTGTCGCGGATGTTCATAAGGAACAACTGCAAAAAATGATCGTCCGTAAAGGTGAACTGTCTTTTTACGATATTTTTACCCTCGCTCGCGCCGAATCAACATCTTAA", - "dna_sequence_length": 471, - "functions": [ - "DUF1449 family inner membrane protein" - ], - "id": "CDS_450", - "location": [ - [ - "NC_000913", - 479251, - "-", - 471 - ] - ], - "md5": "6a2c776e21525041c55020d6855869fd", - "parent_gene": "", - "protein_md5": "8c0fc28afdc8cc4f0ff842ba48eac564", - "protein_translation": "MTEIQRLLTETIESLNTREKRDNKPRFSISFIRKHPGLFIGMYVAFFATLAVMLQSETLSGSVWLLVVLFILLNGFFFFDVYPRYRYEDIDVLDFRVCYNGEWYNTRFVPAALVEAILNSPRVADVHKEQLQKMIVRKGELSFYDIFTLARAESTS", - "protein_translation_length": 156, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0453" - ], - [ - "gene_synonym", - "NP_414992.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001591" - ], - [ - "gene_synonym", - "GeneID:945096" - ], - [ - "gene_synonym", - "maa" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77791" - ], - [ - "gene_synonym", - "EcoGene:EG14239" - ], - [ - "gene_synonym", - "b0459" - ], - [ - "gene_synonym", - "ylaD" - ], - [ - "gene_synonym", - "GI:16128443" - ], - [ - "gene_synonym", - "JW0448" - ] - ], - "dna_sequence": "ATGAGCACAGAAAAAGAAAAGATGATTGCTGGTGAGTTGTATCGCTCGGCAGATGAGACGTTATCTCGCGATCGCCTGCGCGCTCGTCAGCTTATTCACCGATACAATCATTCCCTGGCGGAAGAGCACACATTACGCCAGCAAATTCTCGCTGATCTATTCGGTCAGGTGACAGAGGCTTATATTGAGCCAACGTTTCGCTGTGACTATGGCTATAACATTTTTCTCGGTAATAATTTTTTCGCCAACTTCGATTGCGTGATGCTTGATGTCTGCCCTATTCGCATCGGTGATAACTGTATGTTGGCACCAGGCGTTCATATCTACACGGCAACACATCCCATCGACCCTGTAGCACGTAATAGCGGTGCTGAACTGGGGAAACCCGTCACCATCGGTAATAACGTCTGGATTGGCGGACGCGCGGTCATTAACCCTGGTGTGACCATTGGTGATAACGTCGTGGTAGCCTCAGGTGCAGTTGTCACAAAAGATGTCCCGGACAACGTTGTCGTGGGCGGTAATCCAGCCAGAATAATTAAAAAATTGTAA", - "dna_sequence_length": 552, - "functions": [ - "maltose O-acetyltransferase" - ], - "id": "CDS_451", - "location": [ - [ - "NC_000913", - 479918, - "-", - 552 - ] - ], - "md5": "5e6e7322eb46f9bb12d027117adf286d", - "parent_gene": "", - "protein_md5": "44e440bb09de08f4df2a54e54e6ed7f1", - "protein_translation": "MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHTLRQQILADLFGQVTEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARIIKKL", - "protein_translation_length": 183, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945098" - ], - [ - "gene_synonym", - "NP_414993.1" - ], - [ - "gene_synonym", - "ECK0454" - ], - [ - "gene_synonym", - "b0460" - ], - [ - "gene_synonym", - "EcoGene:EG10439" - ], - [ - "gene_synonym", - "hha" - ], - [ - "gene_synonym", - "ASAP:ABE-0001594" - ], - [ - "gene_synonym", - "GI:16128444" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACE3" - ], - [ - "gene_synonym", - "JW0449" - ] - ], - "dna_sequence": "ATGTCCGAAAAACCTTTAACGAAAACCGATTATTTAATGCGTTTACGTCGTTGCCAGACAATTGACACGCTGGAGCGTGTTATCGAGAAAAATAAATACGAATTATCAGATAATGAACTGGCGGTATTTTACTCAGCCGCAGATCACCGCCTCGCCGAATTGACCATGAATAAACTGTACGACAAGATCCCTTCCTCAGTATGGAAATTTATTCGCTAA", - "dna_sequence_length": 219, - "functions": [ - "modulator of gene expression, with H-NS" - ], - "id": "CDS_452", - "location": [ - [ - "NC_000913", - 480308, - "-", - 219 - ] - ], - "md5": "8fe3797e6376aaf4864bc2420225414a", - "parent_gene": "", - "protein_md5": "12c7241ea3ff19fca3246f734db77c39", - "protein_translation": "MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ybaJ" - ], - [ - "gene_synonym", - "EcoGene:EG12429" - ], - [ - "gene_synonym", - "ECK0455" - ], - [ - "gene_synonym", - "b0461" - ], - [ - "gene_synonym", - "NP_414994.1" - ], - [ - "gene_synonym", - "JW0450" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAR0" - ], - [ - "gene_synonym", - "GI:16128445" - ], - [ - "gene_synonym", - "tomB" - ], - [ - "gene_synonym", - "ASAP:ABE-0001596" - ], - [ - "gene_synonym", - "GeneID:945106" - ] - ], - "dna_sequence": "ATGGATGAATACTCACCCAAAAGACATGATATCGCACAGCTTAAGTTTCTCTGTGAAACCCTGTATCATGACTGCCTTGCAAACCTTGAAGAAAGCAATCATGGCTGGGTAAACGACCCAACCTCGGCGATCAACCTCCAGTTGAATGAACTGATTGAGCATATTGCGACCTTCGCACTTAATTACAAAATTAAGTATAATGAAGACAATAAGCTCATTGAGCAGATCGACGAATATCTGGATGACACCTTTATGTTGTTCAGTAGTTATGGTATTAATATGCAGGATCTTCAGAAATGGCGGAAGTCAGGTAATCGACTATTCCGTTGTTTTGTCAATGCGACGAAAGAGAATCCTGCGAGTTTATCTTGTTAG", - "dna_sequence_length": 375, - "functions": [ - "Hha toxicity attenuator", - "conjugation-related protein" - ], - "id": "CDS_453", - "location": [ - [ - "NC_000913", - 480708, - "-", - 375 - ] - ], - "md5": "4c1bea8d80bb2c591f27a0db7e2a1d12", - "parent_gene": "", - "protein_md5": "59f4d82cd10395502e6959ccb0935bc9", - "protein_translation": "MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNHGWVNDPTSAINLQLNELIEHIATFALNYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQDLQKWRKSGNRLFRCFVNATKENPASLSC", - "protein_translation_length": 124, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "acrE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31224" - ], - [ - "gene_synonym", - "ECK0456" - ], - [ - "gene_synonym", - "GeneID:945108" - ], - [ - "gene_synonym", - "JW0451" - ], - [ - "gene_synonym", - "b0462" - ], - [ - "gene_synonym", - "acrB" - ], - [ - "gene_synonym", - "EcoGene:EG11704" - ], - [ - "gene_synonym", - "NP_414995.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001601" - ], - [ - "gene_synonym", - "GI:16128446" - ] - ], - "dna_sequence": "ATGCCTAATTTCTTTATCGATCGCCCGATTTTTGCGTGGGTGATCGCCATTATCATCATGTTGGCAGGGGGGCTGGCGATCCTCAAACTGCCGGTGGCGCAATATCCTACGATTGCACCGCCGGCAGTAACGATCTCCGCCTCCTACCCCGGCGCTGATGCGAAAACAGTGCAGGACACGGTGACACAGGTTATCGAACAGAATATGAACGGTATCGATAACCTGATGTACATGTCCTCTAACAGTGACTCCACGGGTACCGTGCAGATCACCCTGACCTTTGAGTCTGGTACTGATGCGGATATCGCGCAGGTTCAGGTGCAGAACAAACTGCAGCTGGCGATGCCGTTGCTGCCGCAAGAAGTTCAGCAGCAAGGGGTGAGCGTTGAGAAATCATCCAGCAGCTTCCTGATGGTTGTCGGCGTTATCAACACCGATGGCACCATGACGCAGGAGGATATCTCCGACTACGTGGCGGCGAATATGAAAGATGCCATCAGCCGTACGTCGGGCGTGGGTGATGTTCAGTTGTTCGGTTCACAGTACGCGATGCGTATCTGGATGAACCCGAATGAGCTGAACAAATTCCAGCTAACGCCGGTTGATGTCATTACCGCCATCAAAGCGCAGAACGCCCAGGTTGCGGCGGGTCAGCTCGGTGGTACGCCGCCGGTGAAAGGCCAACAGCTTAACGCCTCTATTATTGCTCAGACGCGTCTGACCTCTACTGAAGAGTTCGGCAAAATCCTGCTGAAAGTGAATCAGGATGGTTCCCGCGTGCTGCTGCGTGACGTCGCGAAGATTGAGCTGGGTGGTGAGAACTACGACATCATCGCAGAGTTTAACGGCCAACCGGCTTCCGGTCTGGGGATCAAGCTGGCGACCGGTGCAAACGCGCTGGATACCGCTGCGGCAATCCGTGCTGAACTGGCGAAGATGGAACCGTTCTTCCCGTCGGGTCTGAAAATTGTTTACCCATACGACACCACGCCGTTCGTGAAAATCTCTATTCACGAAGTGGTTAAAACGCTGGTCGAAGCGATCATCCTCGTGTTCCTGGTTATGTATCTGTTCCTGCAGAACTTCCGCGCGACGTTGATTCCGACCATTGCCGTACCGGTGGTATTGCTCGGGACCTTTGCCGTCCTTGCCGCCTTTGGCTTCTCGATAAACACGCTAACAATGTTCGGGATGGTGCTCGCCATCGGCCTGTTGGTGGATGACGCCATCGTTGTGGTAGAAAACGTTGAGCGTGTTATGGCGGAAGAAGGTTTGCCGCCAAAAGAAGCTACCCGTAAGTCGATGGGGCAGATTCAGGGCGCTCTGGTCGGTATCGCGATGGTACTGTCGGCGGTATTCGTACCGATGGCCTTCTTTGGCGGTTCTACTGGTGCTATCTATCGTCAGTTCTCTATTACCATTGTTTCAGCAATGGCGCTGTCGGTACTGGTGGCGTTGATCCTGACTCCAGCTCTTTGTGCCACCATGCTGAAACCGATTGCCAAAGGCGATCACGGGGAAGGTAAAAAAGGCTTCTTCGGCTGGTTTAACCGCATGTTCGAGAAGAGCACGCACCACTACACCGACAGCGTAGGCGGTATTCTGCGCAGTACGGGGCGTTACCTGGTGCTGTATCTGATCATCGTGGTCGGCATGGCCTATCTGTTCGTGCGTCTGCCAAGCTCCTTCTTGCCAGATGAGGACCAGGGCGTGTTTATGACCATGGTTCAGCTGCCAGCAGGTGCAACGCAGGAACGTACACAGAAAGTGCTCAATGAGGTAACGCATTACTATCTGACCAAAGAAAAGAACAACGTTGAGTCGGTGTTCGCCGTTAACGGCTTCGGCTTTGCGGGACGTGGTCAGAATACCGGTATTGCGTTCGTTTCCTTGAAGGACTGGGCCGATCGTCCGGGCGAAGAAAACAAAGTTGAAGCGATTACCATGCGTGCAACACGCGCTTTCTCGCAAATCAAAGATGCGATGGTTTTCGCCTTTAACCTGCCCGCAATCGTGGAACTGGGTACTGCAACCGGCTTTGACTTTGAGCTGATTGACCAGGCTGGCCTTGGTCACGAAAAACTGACTCAGGCGCGTAACCAGTTGCTTGCAGAAGCAGCGAAGCACCCTGATATGTTGACCAGCGTACGTCCAAACGGTCTGGAAGATACCCCGCAGTTTAAGATTGATATCGACCAGGAAAAAGCGCAGGCGCTGGGTGTTTCTATCAACGACATTAACACCACTCTGGGCGCTGCATGGGGCGGCAGCTATGTGAACGACTTTATCGACCGCGGTCGTGTGAAGAAAGTTTATGTCATGTCAGAAGCGAAATACCGTATGCTGCCGGATGATATCGGCGACTGGTATGTTCGTGCTGCTGATGGTCAGATGGTGCCATTCTCGGCGTTCTCCTCTTCTCGTTGGGAGTACGGTTCGCCGCGTCTGGAACGTTACAACGGCCTGCCATCCATGGAAATCTTAGGCCAGGCGGCACCGGGTAAAAGTACCGGTGAAGCAATGGAGCTGATGGAACAACTGGCGAGCAAACTGCCTACCGGTGTTGGCTATGACTGGACGGGGATGTCCTATCAGGAACGTCTCTCCGGCAACCAGGCACCTTCACTGTACGCGATTTCGTTGATTGTCGTGTTCCTGTGTCTGGCGGCGCTGTACGAGAGCTGGTCGATTCCGTTCTCCGTTATGCTGGTCGTTCCGCTGGGGGTTATCGGTGCGTTGCTGGCTGCCACCTTCCGTGGCCTGACCAATGACGTTTACTTCCAGGTAGGCCTGCTCACAACCATTGGGTTGTCGGCGAAGAACGCGATCCTTATCGTCGAATTCGCCAAAGACTTGATGGATAAAGAAGGTAAAGGTCTGATTGAAGCGACGCTTGATGCGGTGCGGATGCGTTTACGTCCGATCCTGATGACCTCGCTGGCGTTTATCCTCGGCGTTATGCCGCTGGTTATCAGTACTGGTGCTGGTTCCGGCGCGCAGAACGCAGTAGGTACCGGTGTAATGGGCGGGATGGTGACCGCAACGGTACTGGCAATCTTCTTCGTTCCGGTATTCTTTGTGGTGGTTCGCCGCCGCTTTAGCCGCAAGAATGAAGATATCGAGCACAGCCATACTGTCGATCATCATTGA", 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"MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRLTSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPIAKGDHGEGKKGFFGWFNRMFEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLPDEDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNGFGFAGRGQNTGIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNGLEDTPQFKIDIDQEKAQALGVSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASKLPTGVGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVRRRFSRKNEDIEHSHTVDHH", - "protein_translation_length": 1049, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "mbl" - ], - [ - "gene_synonym", - "ECK0457" - ], - [ - "gene_synonym", - "sipB" - ], - [ - "gene_synonym", - "Mb" - ], - [ - "gene_synonym", - "b0463" - ], - [ - "gene_synonym", - "mtcA" - ], - [ - "gene_synonym", - "ASAP:ABE-0001603" - ], - [ - "gene_synonym", - "GeneID:945112" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE06" - ], - [ - "gene_synonym", - "acrA" - ], - [ - "gene_synonym", - "lir" - ], - [ - "gene_synonym", - "NP_414996.1" - ], - [ - "gene_synonym", - "nbsA" - ], - [ - "gene_synonym", - "GI:16128447" - ], - [ - "gene_synonym", - "JW0452" - ], - [ - "gene_synonym", - "EcoGene:EG11703" - ] - ], - "dna_sequence": "ATGAACAAAAACAGAGGGTTTACGCCTCTGGCGGTCGTTCTGATGCTCTCAGGCAGCTTAGCCCTAACAGGATGTGACGACAAACAGGCCCAACAAGGTGGCCAGCAGATGCCCGCCGTTGGCGTAGTAACAGTCAAAACTGAACCTCTGCAGATCACAACCGAGCTTCCGGGTCGCACCAGTGCCTACCGGATCGCAGAAGTTCGTCCTCAAGTTAGCGGGATTATCCTGAAGCGTAATTTCAAAGAAGGTAGCGACATCGAAGCAGGTGTCTCTCTCTATCAGATTGATCCTGCGACCTATCAGGCGACATACGACAGTGCGAAAGGTGATCTGGCGAAAGCCCAGGCTGCAGCCAATATCGCGCAATTGACGGTGAATCGTTATCAGAAACTGCTCGGTACTCAGTACATCAGTAAGCAAGAGTACGATCAGGCTCTGGCTGATGCGCAACAGGCGAATGCTGCGGTAACTGCGGCGAAAGCTGCCGTTGAAACTGCGCGGATCAATCTGGCTTACACCAAAGTCACCTCTCCGATTAGCGGTCGCATTGGTAAGTCGAACGTGACGGAAGGCGCATTGGTACAGAACGGTCAGGCGACTGCGCTGGCAACCGTGCAGCAACTTGATCCGATCTACGTTGATGTGACCCAGTCCAGCAACGACTTCCTGCGCCTGAAACAGGAACTGGCGAATGGCACGCTGAAACAAGAGAACGGCAAAGCCAAAGTGTCACTGATCACCAGTGACGGCATTAAGTTCCCGCAGGACGGTACGCTGGAATTCTCTGACGTTACCGTTGATCAGACCACTGGGTCTATCACCCTACGCGCTATCTTCCCGAACCCGGATCACACTCTGCTGCCGGGTATGTTCGTGCGCGCACGTCTGGAAGAAGGGCTTAATCCAAACGCTATTTTAGTCCCGCAACAGGGCGTAACCCGTACGCCGCGTGGCGATGCCACCGTACTGGTAGTTGGCGCGGATGACAAAGTGGAAACCCGTCCGATCGTTGCAAGCCAGGCTATTGGCGATAAGTGGCTGGTGACAGAAGGTCTGAAAGCAGGCGATCGCGTAGTAATAAGTGGGCTGCAGAAAGTGCGTCCTGGTGTCCAGGTAAAAGCACAAGAAGTTACCGCTGATAATAACCAGCAAGCCGCAAGCGGTGCTCAGCCTGAACAGTCCAAGTCTTAA", 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"gene_synonym", - "b0464" - ], - [ - "gene_synonym", - "EcoGene:EG12116" - ], - [ - "gene_synonym", - "GeneID:945516" - ], - [ - "gene_synonym", - "ASAP:ABE-0001608" - ], - [ - "gene_synonym", - "GI:16128448" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACS9" - ] - ], - "dna_sequence": "ATGGCACGAAAAACCAAACAAGAAGCGCAAGAAACGCGCCAACACATCCTCGATGTGGCTCTACGTCTTTTCTCACAGCAGGGGGTATCATCCACCTCGCTGGGCGAGATTGCAAAAGCAGCTGGCGTTACGCGCGGTGCAATCTACTGGCATTTTAAAGACAAGTCGGATTTGTTCAGTGAGATCTGGGAACTGTCAGAATCCAATATTGGTGAACTAGAGCTTGAGTATCAGGCAAAATTCCCTGGCGATCCACTCTCAGTATTAAGAGAGATATTAATTCATGTTCTTGAATCCACGGTGACAGAAGAACGGCGTCGATTATTGATGGAGATTATATTCCACAAATGCGAATTTGTCGGAGAAATGGCTGTTGTGCAACAGGCACAACGTAATCTCTGTCTGGAAAGTTATGACCGTATAGAACAAACGTTAAAACATTGTATTGAAGCGAAAATGTTGCCTGCGGATTTAATGACGCGTCGCGCAGCAATTATTATGCGCGGCTATATTTCCGGCCTGATGGAAAACTGGCTCTTTGCCCCGCAATCTTTTGATCTTAAAAAAGAAGCCCGCGATTACGTTGCCATCTTACTGGAGATGTATCTCCTGTGCCCCACGCTTCGTAATCCTGCCACTAACGAATAA", - "dna_sequence_length": 648, - "functions": [ - "transcriptional repressor" - ], - "id": "CDS_456", - "location": [ - [ - "NC_000913", - 485761, - "+", - 648 - ] - ], - "md5": "4830743b562913d95b50c732748e8939", - "parent_gene": "", - "protein_md5": "27e8f13d77a01af2c9129bf6c6703e9a", - "protein_translation": "MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVTRGAIYWHFKDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVTEERRRLLMEIIFHKCEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMTRRAAIIMRGYISGLMENWLFAPQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE", - "protein_translation_length": 215, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "pnuH" - ], - [ - "gene_synonym", - "JW0454" - ], - [ - "gene_synonym", - "ECK0459" - ], - [ - "gene_synonym", - "b0465" - ], - [ - "gene_synonym", - "NP_414998.1" - ], - [ - "gene_synonym", - "mscK" - ], - [ - "gene_synonym", - "GI:16128449" - ], - [ - "gene_synonym", - "ASAP:ABE-0001613" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77338" - ], - [ - "gene_synonym", - "aefA" - ], - [ - "gene_synonym", - "GeneID:945132" - ], - [ - "gene_synonym", - "kefA" - ], - [ - "gene_synonym", - "EcoGene:EG14240" - ] - ], - "dna_sequence": "ATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTTATGCCAGAACACGGCGTTTGCGCGGGCGTCATCGAATGGTGATCTGCCGACAAAAGCGGACCTGCAGGCGCAACTTGACTCACTAAATAAACAAAAAGATCTTTCTGCTCAGGACAAACTGGTGCAGCAGGATCTGACAGATACATTAGCCACCCTCGATAAAATCGATCGCATAAAAGAAGAGACAGTTCAGCTACGGCAAAAAGTCGCTGAAGCGCCGGAAAAAATGCGCCAGGCGACCGCGGCGTTAACAGCACTTAGCGATGTCGATAACGACGAAGAAACGCGCAAAATTCTGAGCACGCTGTCGTTGCGCCAGCTGGAAACTCGCGTTGCCCAGGCGCTGGACGATTTGCAAAACGCACAAAACGATCTGGCGTCTTATAACAGCCAGCTGGTTTCGTTACAGACGCAGCCCGAACGCGTGCAAAATGCGATGTATAACGCTTCGCAGCAGCTGCAACAAATTCGCAGTCGTCTGGATGGGACTGATGTCGGCGAGACAGCCTTACGTCCCAGCCAGAAAGTGTTAATGCAGGCCCAGCAGGCGTTGCTGAATGCGGAGATTGACCAGCAGCGTAAAAGCCTGGAAGGGAACACCGTCTTGCAGGATACCTTGCAAAAGCAACGTGATTACGTGACGGCGAACAGCGCTCGTCTGGAGCACCAGTTACAACTGTTGCAAGAAGCGGTAAACAGCAAGCGCCTGACTTTAACCGAAAAAACGGCGCAGGAAGCCGTCTCCCCGGATGAAGCCGCGCGTATTCAGGCTAATCCGCTGGTGAAGCAGGAACTGGAAATTAACCAGCAGTTAAGTCAGCGTCTGATTACCGCGACTGAAAACGGTAATCAGTTGATGCAGCAAAACATTAAAGTCAAAAACTGGCTGGAGCGGGCGCTGCAATCGGAACGCAATATTAAAGAGCAGATTGCCGTCCTGAAGGGCAGCCTGCTGTTGTCTCGTATCCTTTACCAGCAACAACAAACGCTGCCCTCGGCGGATGAACTGGAAAACATGACCAACCGCATCGCGGATTTGCGTCTCGAACAGTTTGAAGTTAACCAGCAGCGTGATGCACTCTTCCAGAGCGATGCGTTCGTCAACAAACTGGAAGAAGGTCACACCAACGAAGTCAACAGCGAAGTTCACGATGCGTTATTGCAAGTGGTTGATATGCGTCGCGAATTGCTGGATCAACTCAACAAACAGTTGGGTAACCAGCTGATGATGGCCATTAACCTGCAAATCAACCAGCAGCAGTTAATGAGTGTGTCGAAAAACCTGAAATCCATCCTGACTCAGCAAATCTTTTGGGTGAACAGTAACCGTCCAATGGACTGGGACTGGATCAAAGCGTTCCCGCAAAGCCTGAAAGATGAATTTAAGTCGATGAAAATCACGGTGAACTGGCAAAAAGCCTGGCCCGCCGTTTTTATCGCTTTCCTCGCTGGTTTGCCGCTGCTGTTGATTGCCGGGCTGATCCACTGGCGTCTGGGCTGGCTGAAAGCGTATCAACAAAAACTGGCTTCCGCTGTGGGTTCCCTGCGTAACGACAGCCAGCTCAACACACCAAAAGCGATCCTTATCGACCTGATCCGTGCGCTGCCGGTGTGCCTGATTATTCTCGCGGTTGGCCTGATTCTGTTGACCATGCAGCTCAACATCAGCGAACTGCTATGGTCGTTCAGCAAAAAACTGGCGATATTCTGGCTGGTGTTTGGCCTGTGCTGGAAGGTACTGGAGAAAAACGGCGTTGCCGTACGTCACTTCGGCATGCCGGAACAGCAGACCAGCCACTGGCGTCGGCAAATTGTCCGCATCAGTCTCGCATTGCTGCCTATCCATTTCTGGTCTGTGGTGGCAGAACTTTCCCCGCTGCATCTGATGGATGATGTGCTGGGGCAAGCGATGATTTTCTTCAACCTGCTGCTGATTGCCTTCCTGGTATGGCCGATGTGCCGCGAAAGCTGGCGTGATAAAGAGTCGCACACCATGCGACTGGTCACCATTACCGTGCTGTCGATAATCCCGATTGCGCTGATGGTGCTGACTGCTACAGGCTACTTCTACACTACGCTGCGTCTGGCAGGACGCTGGATTGAAACCGTTTATCTGGTGATCATCTGGAACCTGCTGTACCAGACGGTACTGCGTGGCTTAAGCGTAGCGGCGCGGCGTATCGCCTGGCGTCGTGCGCTGGCGCGTCGGCAGAATCTGGTGAAAGAGGGCGCAGAAGGTGCTGAACCGCCGGAAGAACCCACCATTGCACTGGAGCAAGTTAACCAGCAGACGCTGCGTATTACCATGTTGCTGATGTTTGCGCTGTTCGGTGTCATGTTCTGGGCAATTTGGTCCGATTTGATCACCGTGTTCAGCTATCTCGACAGCATCACGCTCTGGCATTACAACGGCACTGAAGCTGGCGCTGCGGTGGTGAAAAACGTCACCATGGGCAGTCTGTTGTTTGCGATTATCGCCTCAATGGTGGCCTGGGCGTTGATTCGCAACCTGCCTGGTTTACTGGAAGTGCTGGTGCTCTCGCGACTGAATATGCGCCAGGGCGCGTCGTATGCCATTACTACCATCCTTAACTACATCATTATTGCTGTTGGTGCGATGACGGTGTTCGGATCGCTGGGCGTCTCTTGGGATAAACTCCAGTGGCTGGCCGCAGCATTATCCGTAGGTCTTGGTTTTGGTTTACAAGAAATTTTCGGTAACTTCGTCTCCGGTTTGATCATTCTATTCGAACGTCCGGTGCGTATTGGCGATACGGTAACCATTGGTAGCTTCTCGGGGACGGTAAGTAAGATCCGTATTCGTGCGACAACGATTACCGATTTCGATCGCAAAGAAGTGATCATCCCGAACAAAGCGTTTGTTACCGAGCGTCTGATCAACTGGTCGTTGACTGACACTACTACGCGTCTGGTGATCCGTCTCGGCGTGGCCTATGGCTCCGATCTGGAAAAAGTGCGTAAAGTGTTACTGAAGGCGGCGACTGAGCACCCAAGGGTGATGCACGAACCAATGCCGGAAGTCTTCTTTACGGCATTTGGTGCCAGCACGTTGGATCATGAGCTGCGTCTGTATGTGCGTGAACTGCGTGACCGTAGTCGTACTGTCGATGAGCTGAACCGTACTATCGATCAGCTGTGCCGTGAAAACGACATCAACATTGCCTTTAACCAGCTTGAAGTGCATCTGCACAACGAGAAGGGCGATGAGGTGACGGAAGTAAAACGCGACTACAAAGGCGATGACCCGACGCCAGCGGTAGGGTAA", - "dna_sequence_length": 3363, - "functions": [ - "mechanosensitive channel protein, intermediate conductance, K+ regulated" - ], - "id": "CDS_457", - "location": [ - [ - "NC_000913", - 486536, - "+", - 3363 - ] - ], - "md5": "7a99b7abbad3d9a722182fc439d44d8c", - "parent_gene": "", - "protein_md5": "fc6cf84d6585a3b81e72f45f917c76b3", - "protein_translation": "MTMFQYYKRSRHFVFSAFIAFVFVLLCQNTAFARASSNGDLPTKADLQAQLDSLNKQKDLSAQDKLVQQDLTDTLATLDKIDRIKEETVQLRQKVAEAPEKMRQATAALTALSDVDNDEETRKILSTLSLRQLETRVAQALDDLQNAQNDLASYNSQLVSLQTQPERVQNAMYNASQQLQQIRSRLDGTDVGETALRPSQKVLMQAQQALLNAEIDQQRKSLEGNTVLQDTLQKQRDYVTANSARLEHQLQLLQEAVNSKRLTLTEKTAQEAVSPDEAARIQANPLVKQELEINQQLSQRLITATENGNQLMQQNIKVKNWLERALQSERNIKEQIAVLKGSLLLSRILYQQQQTLPSADELENMTNRIADLRLEQFEVNQQRDALFQSDAFVNKLEEGHTNEVNSEVHDALLQVVDMRRELLDQLNKQLGNQLMMAINLQINQQQLMSVSKNLKSILTQQIFWVNSNRPMDWDWIKAFPQSLKDEFKSMKITVNWQKAWPAVFIAFLAGLPLLLIAGLIHWRLGWLKAYQQKLASAVGSLRNDSQLNTPKAILIDLIRALPVCLIILAVGLILLTMQLNISELLWSFSKKLAIFWLVFGLCWKVLEKNGVAVRHFGMPEQQTSHWRRQIVRISLALLPIHFWSVVAELSPLHLMDDVLGQAMIFFNLLLIAFLVWPMCRESWRDKESHTMRLVTITVLSIIPIALMVLTATGYFYTTLRLAGRWIETVYLVIIWNLLYQTVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPPEEPTIALEQVNQQTLRITMLLMFALFGVMFWAIWSDLITVFSYLDSITLWHYNGTEAGAAVVKNVTMGSLLFAIIASMVAWALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYIIIAVGAMTVFGSLGVSWDKLQWLAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGSFSGTVSKIRIRATTITDFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYGSDLEKVRKVLLKAATEHPRVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVDELNRTIDQLCRENDINIAFNQLEVHLHNEKGDEVTEVKRDYKGDDPTPAVG", - "protein_translation_length": 1120, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12830" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45807" - ], - [ - "gene_synonym", - "GeneID:945144" - ], - [ - "gene_synonym", - "ybaM" - ], - [ - "gene_synonym", - "ECK0460" - ], - [ - "gene_synonym", - "NP_414999.1" - ], - [ - "gene_synonym", - "JW0455" - ], - [ - "gene_synonym", - "b0466" - ], - [ - "gene_synonym", - "ASAP:ABE-0001616" - ], - [ - "gene_synonym", - "GI:16128450" - ] - ], - "dna_sequence": "ATGTCACTGGAAAATGCCCCTGACGATGTCAAACTGGCTGTCGATTTGATTGTGCTGCTGGAGGAAAATCAGATCCCTGCCAGTACCGTGCTGCGCGCGCTGGATATTGTAAAGCGTGATTATGAAAAGAAATTAACGCGCGATGATGAGGCGGAAAAGTGA", - "dna_sequence_length": 162, - "functions": [ - "DUF2496 family protein" - ], - "id": "CDS_458", - "location": [ - [ - "NC_000913", - 490271, - "-", - 162 - ] - ], - "md5": "6891cb80e222837dd0ee13f8ec95c488", - "parent_gene": "", - "protein_md5": "d05cc26d0c280b18e3a5ff1c55bc4a0b", - "protein_translation": "MSLENAPDDVKLAVDLIVLLEENQIPASTVLRALDIVKRDYEKKLTRDDEAEK", - "protein_translation_length": 53, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10765" - ], - [ - "gene_synonym", - "GeneID:945071" - ], - [ - "gene_synonym", - "priC" - ], - [ - "gene_synonym", - "ECK0461" - ], - [ - "gene_synonym", - "JW0456" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23862" - ], - [ - "gene_synonym", - "GI:16128451" - ], - [ - "gene_synonym", - "b0467" - ], - [ - "gene_synonym", - "ASAP:ABE-0001619" - ], - [ - "gene_synonym", - "NP_415000.1" - ] - ], - "dna_sequence": "GTGAAAACCGCCCTGCTGCTGGAAAAACTGGAAGGACAGCTCGCTACGCTGCGTCAGCGTTGTGCCCCGGTGTCACAGTTCGCCACGCTAAGTGCTCGTTTCGACAGGCATCTTTTTCAGACTCGTGCGACAACACTACAGGCTTGTCTCGACGAGGCGGGCGATAATCTGGCTGCGCTTCGTCATGCAGTTGAGCAGCAACAGCTGCCGCAAGTGGCCTGGCTGGCGGAACATCTGGCGGCACAACTGGAAGCCATCGCGCGTGAAGCCTCCGCCTGGTCATTGCGCGAGTGGGACAGTGCACCACCGAAAATTGCCCGCTGGCAGCGTAAACGTATTCAGCATCAGGATTTTGAGCGGCGGCTACGTGAGATGGTTGCCGAACGCAGAGCCCGTCTGGCGCGGGTGACCGATCTCGTGGAACAGCAAACGCTGCATCGTGAAGTGGAAGCCTATGAAGCGCGCCTGGCACGCTGCCGCCATGCGCTGGAAAAAATCGAAAACAGGTTAGCGCGTTTAACCCGCTAG", - "dna_sequence_length": 528, - "functions": [ - "primosomal replication protein N''" - ], - "id": "CDS_459", - "location": [ - [ - "NC_000913", - 490812, - "-", - 528 - ] - ], - "md5": "9cdc608b5c9676f034e8dd392d8e979f", - "parent_gene": "", - "protein_md5": "be01d6ed8eed5fe5e734be8a04151295", - "protein_translation": "MKTALLLEKLEGQLATLRQRCAPVSQFATLSARFDRHLFQTRATTLQACLDEAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREWDSAPPKIARWQRKRIQHQDFERRLREMVAERRARLARVTDLVEQQTLHREVEAYEARLARCRHALEKIENRLARLTR", - "protein_translation_length": 175, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0468" - ], - [ - "gene_synonym", - "ybaN" - ], - [ - "gene_synonym", - "EcoGene:EG12843" - ], - [ - "gene_synonym", - "ECK0462" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAR5" - ], - [ - "gene_synonym", - "JW0457" - ], - [ - "gene_synonym", - "GI:16128452" - ], - [ - "gene_synonym", - "NP_415001.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001625" - ], - [ - "gene_synonym", - "GeneID:945558" - ] - ], - "dna_sequence": "ATGCAACGAATCATTTTAATCATCATTGGCTGGCTGGCGGTAGTGCTGGGTACGCTGGGCGTGGTATTACCGGTATTACCGACGACGCCGTTTATCCTGCTGGCGGCCTGGTGCTTTGCCCGTTCTTCCCCGCGCTTTCACGCCTGGTTGCTGTACCGCTCATGGTTTGGCAGCTATCTACGTTTCTGGCAGAAACATCATGCGATGCCGCGCGGCGTCAAACCGCGGGCGATTTTGCTTATTTTGCTCACGTTTGCCATTTCTCTGTGGTTCGTCCAGATGCCATGGGTGCGCATCATGTTGCTGGTAATTCTCGCCTGTTTGCTTTTCTATATGTGGCGAATTCCGGTGATTGATGAAAAGCAAGAAAAGCACTGA", - "dna_sequence_length": 378, - "functions": [ - "DUF454 family inner membrane protein" - ], - "id": "CDS_460", - "location": [ - [ - "NC_000913", - 490882, - "+", - 378 - ] - ], - "md5": "75b04ba718c22697f900dd39f5f031e9", - "parent_gene": "", - "protein_md5": "bc54172278741905cd4b02571125d3ec", - "protein_translation": "MQRIILIIIGWLAVVLGTLGVVLPVLPTTPFILLAAWCFARSSPRFHAWLLYRSWFGSYLRFWQKHHAMPRGVKPRAILLILLTFAISLWFVQMPWVRIMLLVILACLLFYMWRIPVIDEKQEKH", - "protein_translation_length": 125, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0469" - ], - [ - "gene_synonym", - "JW0458" - ], - [ - "gene_synonym", - "EcoGene:EG10051" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69503" - ], - [ - "gene_synonym", - "ECK0463" - ], - [ - "gene_synonym", - "NP_415002.1" - ], - [ - "gene_synonym", - "apt" - ], - [ - "gene_synonym", - "GI:16128453" - ], - [ - "gene_synonym", - "GeneID:945113" - ], - [ - "gene_synonym", - "ASAP:ABE-0001628" - ] - ], - "dna_sequence": "ATGACCGCGACTGCACAGCAGCTTGAGTATCTCAAAAATAGCATCAAAAGCATTCAGGACTACCCAAAACCCGGCATTCTTTTCCGCGATGTCACCAGCTTACTGGAAGACCCGAAAGCTTACGCTCTCAGCATCGACTTGCTGGTTGAGCGTTACAAAAATGCGGGCATTACCAAAGTTGTCGGCACCGAAGCGCGTGGCTTCTTGTTTGGCGCTCCGGTAGCTCTGGGTCTGGGCGTTGGCTTTGTACCGGTCCGTAAACCGGGCAAACTGCCGCGTGAAACCATCAGTGAAACTTACGACCTGGAATACGGCACCGATCAGCTGGAGATCCACGTTGATGCCATCAAACCGGGCGACAAAGTTCTGGTGGTGGACGACCTGCTGGCAACCGGCGGCACTATCGAAGCGACCGTTAAACTGATCCGTCGTCTGGGTGGTGAAGTGGCTGACGCTGCGTTCATTATCAACCTGTTCGATCTCGGCGGCGAACAGCGTCTCGAAAAACAGGGCATTACCAGCTACAGCCTTGTCCCGTTCCCGGGCCATTAA", - "dna_sequence_length": 552, - "functions": [ - "adenine phosphoribosyltransferase" - ], - "id": "CDS_461", - "location": [ - [ - "NC_000913", - 491412, - "+", - 552 - ] - ], - "md5": "a0589fa4b57eeb8c24aeb5805d3881f7", - "parent_gene": "", - "protein_md5": "6d41a83e06643bdacab599c5dd5ed77c", - "protein_translation": "MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSYSLVPFPGH", - "protein_translation_length": 183, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415003.1" - ], - [ - "gene_synonym", - "JW0459" - ], - [ - "gene_synonym", - "GeneID:945105" - ], - [ - "gene_synonym", - "dnaX" - ], - [ - "gene_synonym", - "b0470" - ], - [ - "gene_synonym", - "dnaZ" - ], - [ - "gene_synonym", - "ECK0464" - ], - [ - "gene_synonym", - "ASAP:ABE-0001633" - ], - [ - "gene_synonym", - "EcoGene:EG10245" - ], - [ - "gene_synonym", - "GI:16128454" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06710" - ] - ], - "dna_sequence": "ATGAGTTATCAGGTCTTAGCCCGAAAATGGCGCCCACAAACCTTTGCTGACGTCGTCGGCCAGGAACATGTGCTGACCGCACTGGCGAACGGCTTGTCGTTAGGGCGTATTCATCATGCTTATCTTTTTTCCGGCACCCGTGGCGTCGGAAAAACCTCTATCGCCCGACTGCTGGCGAAGGGGCTAAACTGCGAAACCGGCATTACCGCGACGCCGTGCGGCGTGTGCGATAACTGTCGTGAAATCGAGCAGGGGCGCTTTGTCGATCTGATTGAAATCGACGCCGCCTCGCGCACCAAAGTTGAAGATACCCGCGACCTGCTGGATAACGTCCAGTACGCTCCGGCGCGTGGTCGTTTCAAAGTTTATCTGATCGACGAAGTGCATATGCTGTCGCGCCACAGCTTTAACGCACTGTTAAAAACCCTTGAAGAGCCGCCGGAGCACGTTAAGTTTCTGCTGGCGACGACCGATCCACAGAAATTGCCGGTGACGATTTTGTCACGCTGTCTGCAATTTCATCTCAAGGCGCTGGATGTCGAGCAAATTCGCCATCAGCTTGAGCACATCCTCAACGAAGAACATATCGCTCACGAGCCGCGGGCGCTGCAATTGCTGGCACGCGCCGCTGAAGGCAGCCTGCGAGATGCCTTAAGTCTGACCGACCAGGCGATTGCCAGCGGTGACGGCCAGGTTTCAACCCAGGCGGTCAGTGCGATGCTGGGTACGCTTGACGACGATCAGGCGCTGTCGCTGGTTGAAGCGATGGTCGAGGCCAACGGCGAGCGCGTAATGGCGCTGATTAATGAAGCCGCTGCCCGTGGTATCGAGTGGGAAGCGTTGCTGGTGGAAATGCTCGGCCTGTTGCATCGTATTGCGATGGTACAACTTTCGCCTGCTGCACTTGGCAACGACATGGCCGCCATCGAGCTGCGGATGCGTGAACTGGCGCGCACCATACCGCCGACGGATATTCAGCTTTACTATCAGACGCTGTTGATTGGTCGCAAAGAATTACCGTATGCGCCGGACCGTCGCATGGGCGTTGAGATGACGCTGCTGCGCGCGCTGGCATTCCATCCGCGTATGCCGCTGCCTGAGCCAGAAGTGCCACGACAGTCCTTTGCACCCGTCGCGCCAACGGCAGTAATGACGCCAACCCAGGTGCCGCCGCAACCGCAATCAGCGCCGCAGCAGGCACCGACTGTACCGCTCCCGGAAACCACCAGCCAGGTGCTGGCGGCGCGCCAGCAGTTGCAGCGCGTGCAGGGAGCAACCAAAGCAAAAAAGAGTGAACCGGCAGCCGCTACCCGCGCGCGGCCGGTGAATAACGCTGCGCTGGAAAGACTGGCTTCGGTCACCGATCGCGTTCAGGCGCGTCCGGTGCCATCGGCGCTGGAAAAAGCGCCAGCCAAAAAAGAAGCGTATCGCTGGAAGGCGACCACTCCGGTGATGCAGCAAAAAGAAGTGGTCGCCACGCCGAAGGCGCTGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCATGTTAAAAGGTTCAACGGTTGAACTGACTATCGTTGAAGATGATAATCCCGCGGTGCGTACGCCGCTGGAGTGGCGTCAGGCGATATACGAAGAAAAACTTGCGCAGGCGCGCGAGTCCATTATTGCGGATAATAATATTCAGACCCTGCGTCGGTTCTTCGATGCGGAGCTGGATGAAGAAAGTATCCGCCCCATTTGA", 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"MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVNNAALERLASVTDRVQARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI", - "protein_translation_length": 643, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ybaB" - ], - [ - "gene_synonym", - "EcoGene:EG11100" - ], - [ - "gene_synonym", - "b0471" - ], - [ - "gene_synonym", - "efbC" - ], - [ - "gene_synonym", - "JW0460" - ], - [ - "gene_synonym", - "ECK0465" - ], - [ - "gene_synonym", - "ASAP:ABE-0001636" - ], - [ - "gene_synonym", - "GI:16128455" - ], - [ - "gene_synonym", - "GeneID:945104" - ], - [ - "gene_synonym", - "NP_415004.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8B5" - ] - ], - "dna_sequence": "ATGTTTGGTAAAGGCGGTCTGGGTAACCTGATGAAGCAAGCCCAGCAGATGCAAGAAAAAATGCAGAAAATGCAGGAAGAGATCGCGCAGCTGGAAGTCACCGGCGAATCTGGCGCAGGTCTGGTAAAAGTGACCATCAACGGTGCACACAACTGCCGTCGCGTAGAGATCGACCCGAGCCTGCTGGAAGACGACAAAGAGATGCTGGAAGACCTGGTGGCTGCAGCATTCAACGACGCAGCACGTCGTATTGAAGAAACGCAGAAAGAAAAAATGGCCTCTGTATCCTCCGGAATGCAGCTGCCGCCTGGCTTTAAGATGCCGTTCTGA", - "dna_sequence_length": 330, - "functions": [ - "DNA-binding protein, putative nucleoid-associated protein" - ], - "id": "CDS_463", - "location": [ - [ - "NC_000913", - 494076, - "+", - 330 - ] - ], - "md5": "dc2b0d9e0a1048c8ca7473c5b91002c1", - "parent_gene": "", - "protein_md5": "a7c2dce10c2ff34d22b8aa674aa75c8c", - "protein_translation": "MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKVTINGAHNCRRVEIDPSLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLPPGFKMPF", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0472" - ], - [ - "gene_synonym", - "JW0461" - ], - [ - "gene_synonym", - "ECK0466" - ], - [ - "gene_synonym", - "GeneID:945100" - ], - [ - "gene_synonym", - "ASAP:ABE-0001638" - ], - [ - "gene_synonym", - "GI:16128456" - ], - [ - "gene_synonym", - "recR" - ], - [ - "gene_synonym", - "EcoGene:EG10834" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7H6" - ], - [ - "gene_synonym", - "NP_415005.1" - ] - ], - "dna_sequence": "ATGCAAACCAGCCCGCTGTTAACACAGCTTATGGAAGCACTGCGCTGTCTGCCGGGCGTTGGCCCGAAGTCGGCGCAGCGTATGGCGTTCACGCTGCTTCAGCGCGATCGTAGCGGCGGGATGCGTCTGGCGCAGGCGCTCACCCGGGCGATGTCGGAAATCGGCCACTGCGCCGATTGCCGCACTTTCACCGAACAGGAAGTCTGTAACATCTGTTCGAATCCGCGTCGTCAGGAAAACGGTCAAATCTGCGTGGTGGAGAGTCCGGCGGACATCTACGCCATTGAGCAGACGGGGCAGTTTTCAGGTCGTTATTTTGTGTTGATGGGGCATCTGTCACCGCTGGACGGCATCGGTCCGGATGATATCGGGCTTGATCGTCTGGAACAGCGTCTGGCAGAGGAAAAAATCACTGAAGTGATCCTCGCCACCAACCCCACGGTTGAAGGTGAAGCTACCGCTAACTACATTGCCGAGCTTTGCGCGCAATATGACGTGGAAGCCAGCCGAATCGCTCATGGCGTTCCGGTTGGCGGCGAGCTGGAAATGGTCGACGGCACCACGTTGTCACACTCCCTTGCCGGGCGTCATAAGATTCGTTTTTAA", - "dna_sequence_length": 606, - "functions": [ - "gap repair protein" - ], - "id": "CDS_464", - "location": [ - [ - "NC_000913", - 494405, - "+", - 606 - ] - ], - "md5": "91e0a5527abd174815015c13b567cf4f", - "parent_gene": "", - "protein_md5": "90556cceaea882a61285fd22312b2d34", - "protein_translation": "MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAELCAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIRF", - "protein_translation_length": 201, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945099" - ], - [ - "gene_synonym", - "ASAP:ABE-0001642" - ], - [ - "gene_synonym", - "b0473" - ], - [ - "gene_synonym", - "EcoGene:EG10461" - ], - [ - "gene_synonym", - "ECK0467" - ], - [ - "gene_synonym", - "JW0462" - ], - [ - "gene_synonym", - "GI:16128457" - ], - [ - "gene_synonym", - "NP_415006.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6Z3" - ], - [ - "gene_synonym", - "htpG" - ] - ], - "dna_sequence": "ATGAAAGGACAAGAAACTCGTGGTTTTCAGTCAGAAGTGAAACAGCTTCTGCACCTGATGATCCATTCTCTCTATTCCAATAAAGAAATCTTCCTGCGTGAGCTTATCTCTAACGCCTCCGATGCGGCGGACAAGCTGCGTTTCCGTGCGCTCTCTAACCCGGACCTGTACGAAGGTGATGGCGAACTACGCGTTCGTGTCTCTTTCGATAAAGACAAGCGTACGCTGACCATCTCCGATAACGGCGTGGGGATGACCCGCGACGAAGTGATTGACCATCTGGGGACTATCGCTAAATCCGGTACCAAATCATTCCTCGAATCCCTGGGTTCTGACCAGGCGAAAGACAGCCAGCTGATCGGTCAGTTTGGTGTTGGTTTCTACTCTGCGTTTATCGTGGCCGACAAAGTGACCGTGCGTACTCGCGCGGCAGGCGAAAAACCAGAAAATGGCGTCTTCTGGGAATCGGCTGGCGAAGGTGAATACACCGTTGCCGACATCACCAAAGAAGATCGTGGTACTGAAATCACCCTGCATCTGCGTGAAGGCGAAGACGAGTTCCTCGATGACTGGCGCGTGCGTTCCATCATCAGCAAATACTCCGACCATATCGCGCTGCCGGTAGAGATCGAAAAACGCGAAGAGAAAGACGGCGAAACCGTTATCTCCTGGGAGAAAATCAACAAAGCGCAGGCGCTGTGGACTCGTAACAAGTCGGAAATCACCGATGAAGAGTACAAAGAGTTCTACAAACACATCGCCCACGACTTTAATGATCCGCTGACCTGGAGCCACAACCGTGTTGAAGGTAAGCAGGAGTACACCAGCCTGCTGTACATCCCGTCCCAGGCTCCGTGGGATATGTGGAACCGCGATCATAAACACGGCCTGAAACTGTATGTTCAGCGTGTGTTCATCATGGACGACGCAGAACAGTTCATGCCGAACTATCTGCGCTTCGTGCGTGGTCTGATTGACTCCAGCGATCTGCCGCTGAACGTTTCCCGTGAAATCCTCCAGGACAGCACGGTAACGCGTAACCTGCGCAATGCGCTGACCAAGCGTGTGCTGCAAATGCTGGAAAAACTGGCGAAAGACGACGCGGAAAAATACCAGACCTTCTGGCAACAGTTTGGCCTGGTACTGAAAGAAGGTCCGGCGGAAGATTTCGCTAACCAGGAAGCGATCGCCAAACTGCTGCGTTTTGCTTCTACCCATACCGATTCTTCTGCGCAGACCGTATCTCTGGAAGACTACGTTTCCCGCATGAAAGAAGGGCAGGAGAAAATCTACTACATCACCGCAGACAGCTATGCGGCAGCGAAGAGCAGCCCGCACCTGGAACTGCTGCGTAAGAAAGGCATCGAAGTTCTGCTGCTTTCCGACCGCATCGATGAGTGGATGATGAACTATCTGACTGAGTTCGACGGTAAACCGTTCCAGTCGGTGTCTAAAGTTGACGAGTCGCTTGAAAAACTGGCTGACGAAGTTGATGAGAGCGCGAAAGAAGCGGAGAAAGCACTGACTCCGTTCATCGACCGTGTGAAAGCCCTGCTCGGCGAGCGCGTGAAAGATGTCCGTCTGACTCACCGTCTGACCGATACGCCAGCGATCGTTTCGACCGACGCGGACGAAATGAGCACTCAGATGGCGAAACTGTTCGCTGCGGCGGGCCAGAAAGTGCCAGAAGTGAAATACATCTTCGAACTGAACCCGGATCACGTACTGGTGAAACGTGCGGCAGATACTGAAGATGAAGCGAAGTTCAGCGAGTGGGTAGAACTGCTGCTGGATCAGGCGCTGCTGGCAGAACGCGGCACGCTGGAAGATCCGAACCTGTTTATTCGTCGTATGAACCAGCTGCTGGTTTCCTGA", 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"MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDGETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEVKYIFELNPDHVLVKRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLVS", - "protein_translation_length": 624, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001645" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69441" - ], - [ - "gene_synonym", - "ECK0468" - ], - [ - "gene_synonym", - "dnaW" - ], - [ - "gene_synonym", - "NP_415007.1" - ], - [ - "gene_synonym", - "JW0463" - ], - [ - "gene_synonym", - "GeneID:945097" - ], - [ - "gene_synonym", - "plsA" - ], - [ - "gene_synonym", - "b0474" - ], - [ - "gene_synonym", - "EcoGene:EG10032" - ], - [ - "gene_synonym", - "GI:16128458" - ], - [ - "gene_synonym", - "adk" - ] - ], - "dna_sequence": "ATGCGTATCATTCTGCTTGGCGCTCCGGGCGCGGGGAAAGGGACTCAGGCTCAGTTCATCATGGAGAAATATGGTATTCCGCAAATCTCCACTGGCGATATGCTGCGTGCTGCGGTCAAATCTGGCTCCGAGCTGGGTAAACAAGCAAAAGACATTATGGATGCTGGCAAACTGGTCACCGACGAACTGGTGATCGCGCTGGTTAAAGAGCGCATTGCTCAGGAAGACTGCCGTAATGGTTTCCTGTTGGACGGCTTCCCGCGTACCATTCCGCAGGCAGACGCGATGAAAGAAGCGGGCATCAATGTTGATTACGTTCTGGAATTCGACGTACCGGACGAACTGATCGTTGACCGTATCGTCGGTCGCCGCGTTCATGCGCCGTCTGGTCGTGTTTATCACGTTAAATTCAATCCGCCGAAAGTAGAAGGCAAAGACGACGTTACCGGTGAAGAACTGACTACCCGTAAAGATGATCAGGAAGAGACCGTACGTAAACGTCTGGTTGAATACCATCAGATGACAGCACCGCTGATCGGCTACTACTCCAAAGAAGCAGAAGCGGGTAATACCAAATACGCGAAAGTTGACGGCACCAAGCCGGTTGCTGAAGTTCGCGCTGATCTGGAAAAAATCCTCGGCTAA", - "dna_sequence_length": 645, - "functions": [ - "adenylate kinase" - ], - "id": "CDS_466", - "location": [ - [ - "NC_000913", - 497175, - "+", - 645 - ] - ], - "md5": "ae1edc3daf7c77e909b86021a194e83c", - "parent_gene": "", - "protein_md5": "19579ce40a7e689d7eafceb415f215e8", - "protein_translation": "MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG", - "protein_translation_length": 214, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947532" - ], - [ - "gene_synonym", - "hemH" - ], - [ - "gene_synonym", - "ECK0469" - ], - [ - "gene_synonym", - "NP_415008.1" - ], - [ - "gene_synonym", - "JW0464" - ], - [ - "gene_synonym", - "ASAP:ABE-0001649" - ], - [ - "gene_synonym", - "popA" - ], - [ - "gene_synonym", - "b0475" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23871" - ], - [ - "gene_synonym", - "visA" - ], - [ - "gene_synonym", - "EcoGene:EG10431" - ], - [ - "gene_synonym", - "GI:16128459" - ] - ], - "dna_sequence": "ATGCGTCAGACTAAAACCGGTATCCTGCTGGCAAACCTGGGTACGCCCGATGCCCCCACACCTGAAGCGGTAAAACGCTATCTGAAACAATTTTTAAGCGACAGACGCGTGGTTGATACCTCACGGTTGTTATGGTGGCCATTGCTGCGCGGCGTGATTTTGCCGCTGCGCTCGCCGCGTGTGGCGAAGCTGTATGCCTCTGTCTGGATGGAAGGTGGCTCGCCGCTGATGGTTTACAGCCGCCAGCAACAGCAGGCGCTGGCACAACGTTTACCGGAGATGCCCGTAGCGCTGGGAATGAGCTACGGCTCGCCATCACTGGAAAGCGCCGTAGATGAACTCCTGGCAGAGCATGTAGATCATATTGTGGTGCTGCCGCTTTATCCGCAATTCTCCTGTTCTACGGTCGGTGCGGTATGGGATGAACTGGCACGCATTCTGGCGCGCAAACGTAGCATTCCGGGGATATCGTTTATACGTGATTACGCCGATAACCACGATTACATTAATGCACTGGCGAACAGCGTACGCGCTTCTTTTGCCAAACATGGCGAACCGGATCTGCTACTGCTCTCTTATCATGGCATTCCCCAGCGTTATGCAGATGAAGGCGATGATTACCCGCAACGTTGCCGCACAACGACTCGTGAACTGGCTTCCGCATTGGGGATGGCACCGGAAAAAGTGATGATGACCTTTCAGTCGCGCTTTGGTCGGGAACCCTGGCTGATGCCTTATACCGACGAAACGCTGAAAATGCTCGGAGAAAAAGGCGTAGGTCATATTCAGGTGATGTGCCCGGGCTTTGCTGCGGATTGTCTGGAGACGCTGGAAGAGATTGCCGAGCAAAACCGTGAGGTCTTCCTCGGTGCCGGCGGGAAAAAATATGAATATATTCCGGCGCTTAATGCCACGCCGGAACATATCGAAATGATGGCTAATCTTGTTGCCGCGTATCGCTAA", - "dna_sequence_length": 963, - "functions": [ - "ferrochelatase" - ], - "id": "CDS_467", - "location": [ - [ - "NC_000913", - 498055, - "+", - 963 - ] - ], - "md5": "5d7d91e9f1ff8c825368c1848c7867a4", - "parent_gene": "", - "protein_md5": "7c2f949d42783fbb757e42e7445e27a4", - "protein_translation": "MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLLWWPLLRGVILPLRSPRVAKLYASVWMEGGSPLMVYSRQQQQALAQRLPEMPVALGMSYGSPSLESAVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIRDYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTRELASALGMAPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLETLEEIAEQNREVFLGAGGKKYEYIPALNATPEHIEMMANLVAAYR", - "protein_translation_length": 320, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "aes" - ], - [ - "gene_synonym", - "ASAP:ABE-0001651" - ], - [ - "gene_synonym", - "JW0465" - ], - [ - "gene_synonym", - "ybaC" - ], - [ - "gene_synonym", - "EcoGene:EG11101" - ], - [ - "gene_synonym", - "b0476" - ], - [ - "gene_synonym", - "ECK0470" - ], - [ - "gene_synonym", - "GeneID:947514" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23872" - ], - [ - "gene_synonym", - "NP_415009.1" - ], - [ - "gene_synonym", - "GI:16128460" - ] - ], - "dna_sequence": "ATGAAGCCGGAAAACAAACTACCTGTTCTGGACCTTATTTCTGCTGAAATGAAGACCGTTGTGAATACTCTTCAGCCGGATTTACCGCCCTGGCCCGCAACGGGAACGATTGCTGAGCAACGACAGTATTACACGCTTGAGCGCCGATTCTGGAATGCGGGCGCTCCAGAAATGGCAACCAGAGCTTACATGGTTCCAACAAAATATGGGCAGGTGGAAACACGTCTCTTTTGTCCGCAGCCAGATAGCCCAGCGACGCTATTTTATTTGCATGGAGGCGGTTTTATTCTCGGCAATCTCGATACCCACGATCGCATCATGCGCCTGCTGGCAAGCTACAGCCAATGTACGGTGATTGGTATTGATTACACCCTTTCACCTGAAGCGCGTTTTCCGCAAGCGATAGAGGAAATTGTGGCTGCTTGTTGTTATTTCCACCAGCAGGCGGAGGATTATCAAATCAATATGTCCCGCATTGGCTTTGCCGGTGATTCCGCAGGTGCCATGCTGGCGCTCGCCAGTGCGTTGTGGTTGCGTGATAAACAGATCGATTGCGGTAAAGTTGCGGGCGTTTTGCTGTGGTATGGGCTTTACGGATTACGGGATTCCGTGACTCGTCGTCTGTTGGGCGGTGTCTGGGATGGCTTAACGCAACAGGATTTGCAGATGTACGAAGAGGCATATTTAAGCAACGACGCGGACCGCGAGTCGCCGTATTACTGTCTGTTTAATAATGATCTCACTCGCGAAGTTCCGCCCTGTTTTATTGCCGGGGCGGAGTTCGATCCGCTGCTGGATGACAGCCGTCTGCTTTACCAGACGTTAGCGGCGCATCAGCAGCCCTGTGAGTTCAAACTCTACCCAGGCACGCTGCACGCCTTTTTGCATTATTCACGGATGATGAAAACCGCCGACGAGGCTCTTCGCGACGGCGCTCAGTTCTTTACCGCTCAGCTTTAG", - "dna_sequence_length": 960, - "functions": [ - "acetyl esterase" - ], - "id": "CDS_468", - "location": [ - [ - "NC_000913", - 499973, - "-", - 960 - ] - ], - "md5": "86c47780191d1ab92f67722eeca42028", - "parent_gene": "", - "protein_md5": "19816cf0ce1cd4f4f9a55d83b338530c", - "protein_translation": "MKPENKLPVLDLISAEMKTVVNTLQPDLPPWPATGTIAEQRQYYTLERRFWNAGAPEMATRAYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFILGNLDTHDRIMRLLASYSQCTVIGIDYTLSPEARFPQAIEEIVAACCYFHQQAEDYQINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVTRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMKTADEALRDGAQFFTAQL", - "protein_translation_length": 319, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415010.1" - ], - [ - "gene_synonym", - "GeneID:946584" - ], - [ - "gene_synonym", - "ASAP:ABE-0001655" - ], - [ - "gene_synonym", - "EcoGene:EG11102" - ], - [ - "gene_synonym", - "JW0466" - ], - [ - "gene_synonym", - "ECK0471" - ], - [ - "gene_synonym", - "b0477" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEW6" - ], - [ - "gene_synonym", - "gsk" - ], - [ - "gene_synonym", - "GI:16128461" - ] - ], - "dna_sequence": "ATGAAATTTCCCGGTAAACGTAAATCCAAACATTACTTCCCCGTAAACGCACGCGATCCGCTGCTTCAGCAATTCCAGCCAGAAAACGAAACCAGCGCTGCCTGGGTAGTGGGTATCGATCAAACGCTGGTCGATATTGAAGCGAAAGTGGATGATGAATTTATTGAGCGTTATGGATTAAGCGCCGGGCATTCACTGGTGATTGAGGATGATGTAGCCGAAGCGCTTTATCAGGAACTAAAACAGAAAAACCTGATTACCCATCAGTTTGCGGGTGGCACCATTGGTAACACCATGCACAACTACTCGGTGCTCGCGGACGACCGTTCGGTGCTGCTGGGCGTCATGTGCAGCAATATTGAAATTGGCAGTTATGCCTATCGTTACCTGTGTAACACTTCCAGCCGTACCGATCTTAACTATCTACAAGGCGTGGATGGCCCGATTGGTCGTTGCTTTACGCTGATTGGCGAGTCCGGGGAACGTACCTTTGCTATCAGTCCAGGCCACATGAACCAGCTGCGGGCTGAAAGCATTCCGGAAGATGTGATTGCCGGAGCCTCGGCACTGGTTCTCACCTCATATCTGGTGCGTTGCAAGCCGGGTGAACCCATGCCGGAAGCAACCATGAAAGCCATTGAGTACGCGAAGAAATATAACGTACCGGTGGTGCTGACGCTGGGCACCAAGTTTGTCATTGCCGAGAATCCGCAGTGGTGGCAGCAATTCCTCAAAGATCACGTCTCTATCCTTGCGATGAACGAAGATGAAGCCGAAGCGTTGACCGGAGAAAGCGATCCGTTGTTGGCATCTGACAAGGCGCTGGACTGGGTAGATCTGGTGCTGTGCACCGCCGGGCCAATCGGCTTGTATATGGCGGGCTTTACCGAAGACGAAGCGAAACGTAAAACCCAGCATCCGCTGCTGCCGGGCGCTATAGCGGAATTCAACCAGTATGAGTTTAGCCGCGCCATGCGCCACAAGGATTGCCAGAATCCGCTGCGTGTATATTCGCACATTGCGCCGTACATGGGCGGGCCGGAAAAAATCATGAACACTAATGGAGCGGGGGATGGCGCATTGGCAGCGTTGCTGCATGACATTACCGCCAACAGCTACCATCGTAGCAACGTACCAAACTCCAGCAAACATAAATTCACCTGGTTAACTTATTCATCGTTAGCGCAGGTGTGTAAATATGCTAACCGTGTGAGCTATCAGGTACTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAA", - "dna_sequence_length": 1305, - "functions": [ - "inosine/guanosine kinase" - ], - "id": "CDS_469", - "location": [ - [ - "NC_000913", - 500125, - "+", - 1305 - ] - ], - "md5": "6df633fa452aeac4e80ed5fa4e5460a1", - "parent_gene": "", - "protein_md5": "f8f4894b2ba9ef23ee23d36a37b7e00f", - "protein_translation": "MKFPGKRKSKHYFPVNARDPLLQQFQPENETSAAWVVGIDQTLVDIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLITHQFAGGTIGNTMHNYSVLADDRSVLLGVMCSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLIGESGERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYLVRCKPGEPMPEATMKAIEYAKKYNVPVVLTLGTKFVIAENPQWWQQFLKDHVSILAMNEDEAEALTGESDPLLASDKALDWVDLVLCTAGPIGLYMAGFTEDEAKRKTQHPLLPGAIAEFNQYEFSRAMRHKDCQNPLRVYSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANSYHRSNVPNSSKHKFTWLTYSSLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWDR", - "protein_translation_length": 434, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0478" - ], - [ - "gene_synonym", - "ybaL" - ], - [ - "gene_synonym", - "GeneID:946576" - ], - [ - "gene_synonym", - "JW0467" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39830" - ], - [ - "gene_synonym", - "NP_415011.1" - ], - [ - "gene_synonym", - "ECK0472" - ], - [ - "gene_synonym", - "EcoGene:EG12623" - ], - [ - "gene_synonym", - "GI:16128462" - ], - [ - "gene_synonym", - "ylaA" - ], - [ - "gene_synonym", - "ASAP:ABE-0001658" - ] - ], - "dna_sequence": "ATGCATCACGCCACCCCGCTTATCACCACCATTGTTGGCGGCCTTGTGCTCGCCTTTATCCTCGGCATGCTGGCCAATAAACTACGTATTTCTCCTCTGGTGGGATATCTGTTAGCGGGTGTGCTGGCAGGACCATTCACTCCGGGCTTTGTTGCCGATACCAAGCTTGCCCCGGAACTGGCTGAACTGGGCGTCATTCTGTTGATGTTTGGCGTCGGTTTGCACTTTTCGCTGAAGGATTTGATGGCGGTAAAGGCCATCGCCATTCCCGGTGCGATCGCCCAGATAGCCGTGGCGACGCTGCTGGGTATGGCGCTCTCTGCCGTGCTGGGCTGGTCGTTAATGACCGGTATCGTGTTCGGTTTATGTCTTTCCACCGCCAGTACCGTGGTGTTACTGCGCGCACTTGAAGAACGGCAATTAATTGACAGTCAGCGTGGGCAAATCGCCATCGGTTGGTTGATTGTGGAAGACCTGGTAATGGTTCTGACGCTGGTGTTGCTGCCCGCAGTGGCAGGAATGATGGAACAGGGCGATGTGGGCTTTGCCACTCTTGCAGTCGATATGGGGATCACCATCGGCAAAGTGATCGCATTTATCGCCATTATGATGCTGGTAGGTCGCCGTCTGGTGCCGTGGATTATGGCACGCAGCGCGGCAACCGGTTCTCGCGAGCTGTTTACCCTGTCGGTGCTGGCGCTGGCGTTAGGGGTTGCCTTTGGTGCGGTAGAGCTGTTTGATGTCTCCTTTGCACTCGGTGCGTTCTTTGCCGGGATGGTACTGAACGAGTCTGAACTGAGTCACCGTGCCGCCCACGATACGCTGCCATTGCGCGACGCGTTTGCGGTGCTGTTTTTTGTCTCCGTCGGGATGTTGTTTGATCCGTTAATTCTGATTCAGCAACCGCTGGCAGTGCTGGCGACGCTGGCGATTATTCTGTTTGGTAAGTCGTTAGCCGCATTTTTCCTGGTGCGACTGTTTGGTCACTCCCAACGTACGGCATTAACCATCGCCGCCAGCCTGGCGCAGATTGGTGAGTTCGCGTTTATCCTGGCGGGACTGGGAATGGCATTGAATTTACTGCCGCAGGCCGGACAAAACCTGGTACTGGCAGGGGCGATCCTGTCGATTATGCTCAACCCGGTACTGTTCGCACTACTGGAGAAATATCTGGCGAAGACCGAAACGCTGGAAGAGCAGACGCTGGAAGAGGCAATCGAAGAAGAGAAGCAGATCCCAGTGGATATTTGCAACCATGCGCTACTGGTGGGTTACGGTCGTGTAGGCAGCCTGCTGGGGGAGAAATTGCTCGCCTCTGATATTCCGCTGGTGGTGATTGAGACGTCACGAACCCGTGTTGATGAGCTGCGAGAGCGCGGGGTCCGCGCAGTATTGGGCAATGCGGCGAACGAAGAAATTATGCAACTGGCGCATCTGGAATGTGCAAAATGGCTGATCCTGACGATTCCCAACGGTTATGAAGCGGGTGAGATTGTGGCATCTGCCCGCGCGAAAAATCCGGATATTGAGATTATTGCCCGCGCCCATTATGACGATGAAGTGGCGTATATCACCGAACGTGGTGCGAATCAGGTAGTGATGGGCGAGCGTGAAATCGCCCGTACCATGCTGGAACTGCTGGAAACGCCACCGGCGGGTGAGGTGGTGACGGGGTAA", - "dna_sequence_length": 1677, - "functions": [ - "inner membrane putative NAD(P)-binding transporter" - ], - "id": "CDS_470", - "location": [ - [ - "NC_000913", - 503238, - "-", - 1677 - ] - ], - "md5": "acdbb3c6ab7697f8e4c585dcb608c2a7", - "parent_gene": "", - "protein_md5": "07e4d7e681d4d66b23d6e92af2c1f0d3", - "protein_translation": "MHHATPLITTIVGGLVLAFILGMLANKLRISPLVGYLLAGVLAGPFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKAIAIPGAIAQIAVATLLGMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLVMVLTLVLLPAVAGMMEQGDVGFATLAVDMGITIGKVIAFIAIMMLVGRRLVPWIMARSAATGSRELFTLSVLALALGVAFGAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLPLRDAFAVLFFVSVGMLFDPLILIQQPLAVLATLAIILFGKSLAAFFLVRLFGHSQRTALTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFALLEKYLAKTETLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPDIEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLETPPAGEVVTG", - "protein_translation_length": 558, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0479" - ], - [ - "gene_synonym", - "GeneID:945119" - ], - [ - "gene_synonym", - "JW0468" - ], - [ - "gene_synonym", - "fsr" - ], - [ - "gene_synonym", - "ECK0473" - ], - [ - "gene_synonym", - "NP_415012.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52067" - ], - [ - "gene_synonym", - "EcoGene:EG13268" - ], - [ - "gene_synonym", - "GI:16128463" - ], - [ - "gene_synonym", - "ASAP:ABE-0001661" - ] - ], - "dna_sequence": "ATGGCAATGAGTGAACAACCCCAGCCTGTGGCGGGCGCGGCTGCGTCAACGACCAAGGCCCGAACATCGTTTGGTATTTTAGGTGCTATCAGCCTCTCACATCTGCTGAACGACATGATCCAATCGCTGATTCTGGCGATTTATCCGCTGCTTCAGTCAGAATTTTCTCTGACATTTATGCAGATTGGCATGATAACCCTCACCTTCCAGCTCGCCTCTTCGCTACTGCAACCAGTGGTCGGCTACTGGACCGATAAATATCCGATGCCATGGTCGTTGCCAATTGGCATGTGCTTTACCTTAAGCGGTCTGGTGCTGCTTGCGCTGGCGGGCAGTTTTGGCGCAGTTCTGCTGGCGGCGGCGCTGGTCGGTACCGGTTCATCGGTCTTTCATCCGGAATCTTCTCGCGTGGCCCGTATGGCTTCCGGCGGGCGGCATGGCCTGGCGCAATCTATCTTTCAGGTCGGCGGCAACTTTGGCAGTTCCCTGGGACCCTTGCTGGCGGCGGTGATTATCGCGCCTTATGGCAAAGGCAACGTTGCCTGGTTTGTGCTTGCGGCACTGCTGGCGATCGTGGTGTTGGCGCAAATCAGCCGTTGGTACTCGGCACAGCACCGAATGAATAAAGGAAAACCCAAAGCGACGATTATCAATCCACTGCCGCGCAATAAAGTTGTACTGGCGGTCAGCATTCTGTTAATCCTCATTTTCTCGAAATATTTCTATATGGCGAGCATCAGCAGCTATTACACCTTTTATCTGATGCAAAAATTCGGATTATCTATCCAGAATGCTCAGCTTCATCTGTTTGCCTTCCTGTTTGCCGTTGCGGCAGGTACGGTGATCGGCGGGCCTGTAGGGGATAAAATTGGGCGGAAATATGTGATTTGGGGCTCTATCCTCGGCGTTGCGCCGTTTACGCTGATTTTACCCTACGCCAGCCTGCACTGGACGGGGGTTTTAACGGTGATTATTGGATTTATCCTCGCTTCGGCATTCTCTGCCATTCTGGTCTACGCTCAGGAGCTGCTTCCAGGACGTATCGGTATGGTTTCTGGACTCTTTTTCGGTTTTGCTTTTGGCATGGGAGGTCTGGGAGCGGCAGTTCTGGGGCTTATCGCCGATCACACCAGCATCGAGTTAGTCTATAAAATCTGTGCTTTCCTGCCACTATTGGGGATGTTGACCATATTCCTGCCTGATAACCGGCATAAAGACTGA", - "dna_sequence_length": 1221, - "functions": [ - "putative fosmidomycin efflux system protein" - ], - "id": "CDS_471", - "location": [ - [ - "NC_000913", - 504696, - "-", - 1221 - ] - ], - "md5": "18ca3397871a77541f94259f1283255e", - "parent_gene": "", - "protein_md5": "9b82d4781f21605010344b7832934572", - "protein_translation": "MAMSEQPQPVAGAAASTTKARTSFGILGAISLSHLLNDMIQSLILAIYPLLQSEFSLTFMQIGMITLTFQLASSLLQPVVGYWTDKYPMPWSLPIGMCFTLSGLVLLALAGSFGAVLLAAALVGTGSSVFHPESSRVARMASGGRHGLAQSIFQVGGNFGSSLGPLLAAVIIAPYGKGNVAWFVLAALLAIVVLAQISRWYSAQHRMNKGKPKATIINPLPRNKVVLAVSILLILIFSKYFYMASISSYYTFYLMQKFGLSIQNAQLHLFAFLFAVAAGTVIGGPVGDKIGRKYVIWGSILGVAPFTLILPYASLHWTGVLTVIIGFILASAFSAILVYAQELLPGRIGMVSGLFFGFAFGMGGLGAAVLGLIADHTSIELVYKICAFLPLLGMLTIFLPDNRHKD", - "protein_translation_length": 406, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ushA" - ], - [ - "gene_synonym", - "JW0469" - ], - [ - "gene_synonym", - "NP_415013.1" - ], - [ - "gene_synonym", - "ECK0474" - ], - [ - "gene_synonym", - "GeneID:947331" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07024" - ], - [ - "gene_synonym", - "ASAP:ABE-0001668" - ], - [ - "gene_synonym", - "EcoGene:EG11060" - ], - [ - "gene_synonym", - "b0480" - ], - [ - "gene_synonym", - "GI:16128464" - ] - ], - "dna_sequence": "ATGAAATTATTGCAGCGGGGCGTGGCGTTAGCGCTGTTAACCACATTTACACTGGCGAGTGAAACTGCTCTGGCGTATGAGCAGGATAAAACCTACAAAATTACAGTTCTGCATACCAATGATCATCATGGGCATTTTTGGCGCAATGAATATGGCGAATATGGTCTGGCGGCGCAAAAAACGCTGGTGGATGGTATCCGCAAAGAGGTTGCGGCTGAAGGCGGTAGCGTGCTGCTACTTTCCGGTGGCGACATTAACACTGGCGTGCCCGAGTCTGACTTACAGGATGCCGAACCTGATTTTCGCGGTATGAATCTGGTGGGCTATGACGCGATGGCGATCGGTAATCATGAATTTGATAATCCGCTCACCGTATTACGCCAGCAGGAAAAGTGGGCCAAGTTCCCGTTGCTTTCCGCGAATATCTACCAGAAAAGTACTGGCGAGCGCCTGTTTAAACCGTGGGCGCTGTTTAAGCGTCAGGATCTGAAAATTGCCGTTATTGGGCTGACAACCGATGACACAGCAAAAATTGGTAACCCGGAATACTTCACTGATATCGAATTTCGTAAGCCCGCCGATGAAGCGAAGCTGGTGATTCAGGAGCTGCAACAGACAGAAAAGCCAGACATTATTATCGCGGCGACCCATATGGGGCATTACGATAATGGTGAGCACGGCTCTAACGCACCGGGCGATGTGGAGATGGCACGCGCGCTGCCTGCCGGATCGCTGGCGATGATCGTCGGTGGTCACTCGCAAGATCCGGTCTGCATGGCGGCAGAAAACAAAAAACAGGTCGATTACGTGCCGGGTACGCCATGCAAACCAGATCAACAAAACGGCATCTGGATTGTGCAGGCGCATGAGTGGGGCAAATACGTGGGACGGGCTGATTTTGAGTTTCGTAATGGCGAAATGAAAATGGTTAACTACCAGCTGATTCCGGTGAACCTGAAGAAGAAAGTGACCTGGGAAGACGGGAAAAGCGAGCGCGTGCTTTACACTCCTGAAATCGCTGAAAACCAGCAAATGATCTCGCTGTTATCACCGTTCCAGAACAAAGGCAAAGCGCAGCTGGAAGTGAAAATAGGCGAAACCAATGGTCGTCTGGAAGGCGATCGTGACAAAGTGCGTTTTGTACAGACCAATATGGGGCGGTTGATTCTGGCAGCCCAAATGGATCGCACTGGTGCCGACTTTGCGGTGATGAGCGGAGGCGGAATTCGTGATTCTATCGAAGCAGGCGATATCAGCTATAAAAACGTGCTGAAAGTGCAGCCATTCGGCAATGTGGTGGTGTATGCCGACATGACCGGTAAAGAGGTGATTGATTACCTGACCGCCGTCGCGCAGATGAAGCCAGATTCAGGTGCCTACCCGCAATTTGCCAACGTTAGCTTTGTGGCGAAAGACGGCAAACTGAACGACCTTAAAATCAAAGGCGAACCGGTCGATCCGGCGAAAACTTACCGTATGGCGACATTAAACTTCAATGCCACCGGCGGTGATGGATATCCGCGCCTTGATAACAAACCGGGCTATGTGAATACCGGCTTTATTGATGCCGAAGTGCTGAAAGCGTATATCCAGAAAAGCTCGCCGCTGGATGTGAGTGTTTATGAACCGAAAGGTGAGGTGAGCTGGCAGTAA", - "dna_sequence_length": 1653, - "functions": [ - "bifunctional UDP-sugar hydrolase/5'-nucleotidase" - ], - "id": "CDS_472", - "location": [ - [ - "NC_000913", - 504914, - "+", - 1653 - ] - ], - "md5": "792d0df285e310ff8944d2ef6336f61f", - "parent_gene": "", - "protein_md5": "acd6e2367d87dbff7971d0b93bd179e7", - "protein_translation": "MKLLQRGVALALLTTFTLASETALAYEQDKTYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAAQMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPDSGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ", - "protein_translation_length": 550, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ybaK" - ], - [ - "gene_synonym", - "GeneID:947083" - ], - [ - "gene_synonym", - "proX" - ], - [ - "gene_synonym", - "ECK0475" - ], - [ - "gene_synonym", - "NP_415014.1" - ], - [ - "gene_synonym", - "JW0470" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAR3" - ], - [ - "gene_synonym", - "EcoGene:EG12454" - ], - [ - "gene_synonym", - "b0481" - ], - [ - "gene_synonym", - "ASAP:ABE-0001670" - ], - [ - "gene_synonym", - "GI:16128465" - ] - ], - "dna_sequence": "ATGACACCCGCAGTTAAATTACTCGAAAAAAACAAGATTTCGTTTCAAATCCATACCTACGAGCACGATCCGGCTGAAACCAATTTTGGCGATGAAGTCGTCAAAAAATTAGGTTTGAATCCGGATCAGGTCTACAAAACGCTGCTGGTGGCAGTGAACGGTGATATGAAACACCTTGCCGTGGCCGTTACGCCGGTCGCAGGTCAACTGGATCTTAAAAAAGTAGCAAAAGCGCTGGGTGCCAAGAAAGTTGAGATGGCCGATCCGATGGTCGCGCAGCGTTCGACGGGATACCTGGTTGGGGGGATTAGCCCACTGGGGCAGAAAAAACGTCTGCCAACGATTATCGACGCCCCCGCACAAGAATTTGCCACTATTTATGTTTCCGGCGGCAAGCGCGGACTGGATATCGAACTGGCGGCAGGCGATCTGGCAAAGATCCTCGATGCCAAATTTGCTGATATCGCCCGCCGCGATTAA", - "dna_sequence_length": 480, - "functions": [ - "Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase" - ], - "id": "CDS_473", - "location": [ - [ - "NC_000913", - 507082, - "-", - 480 - ] - ], - "md5": "7ffa4368e5e124fa45288c7cc9a3fa74", - "parent_gene": "", - "protein_md5": "677dcd5545f1f8a54d803b6efc570355", - "protein_translation": "MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQVYKTLLVAVNGDMKHLAVAVTPVAGQLDLKKVAKALGAKKVEMADPMVAQRSTGYLVGGISPLGQKKRLPTIIDAPAQEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD", - "protein_translation_length": 159, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945124" - ], - [ - "gene_synonym", - "EcoGene:EG13244" - ], - [ - "gene_synonym", - "NP_415015.1" - ], - [ - "gene_synonym", - "ECK0476" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77301" - ], - [ - "gene_synonym", - "JW0471" - ], - [ - "gene_synonym", - "b0482" - ], - [ - "gene_synonym", - "ybaP" - ], - [ - "gene_synonym", - "GI:16128466" - ], - [ - "gene_synonym", - "ASAP:ABE-0001673" - ] - ], - "dna_sequence": "ATGGATCTGTTGTACCGGGTAAAAACGCTTTGGGCCGCGCTGCGCGGTAATCATTACACCTGGCCTGCCATCGATATCACCCTCCCCGGCAATCGCCATTTTCATCTGATTGGCAGTATTCATATGGGTAGCCACGATATGGCTCCCCTGCCCACCCGTTTGCTCAAAAAGCTCAAAAACGCCGATGCGCTGATCGTCGAGGCGGATGTTTCCACCAGCGATACGCCTTTTGCTAATTTGCCTGCCTGCGAGGCGCTGGAAGAGCGCATTAGCGAGGAGCAACTCCAAAACCTGCAGCACATTAGCCAGGAGATGGGCATTTCTCCCTCACTCTTTTCTACCCAACCGCTGTGGCAAATCGCGATGGTTCTTCAGGCGACGCAGGCACAAAAACTGGGGCTGCGGGCAGAATACGGTATCGATTACCAGCTATTGCAGGCGGCGAAGCAACAACATAAACCCGTGATTGAACTGGAAGGGGCTGAAAACCAGATTGCCATGTTGCTCCAGCTCCCTGACAAAGGACTGGCGCTGCTGGACGATACGCTGACCCACTGGCATACCAACGCACGGTTGCTGCAACAAATGATGAGCTGGTGGCTGAATGCACCGCCGCAAAATAATGATATAACGCTGCCCAATACGTTCAGTCAGTCGCTGTACGATGTGCTGATGCATCAGCGAAATCTCGCCTGGCGGGATAAATTACGCGCCATGCCGCCGGGGCGATATGTGGTCGCGGTCGGTGCACTACACCTGTATGGAGAAGGGAATTTGCCGCAAATGTTGCGCTAA", - "dna_sequence_length": 795, - "functions": [ - "TraB family protein" - ], - "id": "CDS_474", - "location": [ - [ - "NC_000913", - 508080, - "-", - 795 - ] - ], - "md5": "ae5803b5a30606442c3d259e21cd8d4f", - "parent_gene": "", - "protein_md5": "955e9d6870bf40a4e65d45a752744566", - "protein_translation": "MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHFHLIGSIHMGSHDMAPLPTRLLKKLKNADALIVEADVSTSDTPFANLPACEALEERISEEQLQNLQHISQEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEGAENQIAMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNDITLPNTFSQSLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR", - "protein_translation_length": 264, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9T6" - ], - [ - "gene_synonym", - "NP_415016.4" - ], - [ - "gene_synonym", - "GeneID:948800" - ], - [ - "gene_synonym", - "EcoGene:EG13245" - ], - [ - "gene_synonym", - "ASAP:ABE-0001677" - ], - [ - "gene_synonym", - "ECK0477" - ], - [ - "gene_synonym", - "JW0472" - ], - [ - "gene_synonym", - "b0483" - ], - [ - "gene_synonym", - "ybaQ" - ], - [ - "gene_synonym", - "GI:90111140" - ] - ], - "dna_sequence": "ATGAAACAGGCAACAAGAAAACCGACGACACCCGGAGATATTCTTCTCTATGAATATCTGGAACCGCTCGATTTGAAAATCAATGAGTTAGCAGAGTTGCTGCATGTTCATCGTAATAGCGTCAGTGCACTGATCAATAACAATCGTAAACTCACTACTGAGATGGCATTTCGTCTGGCGAAAGTTTTTGATACCACAGTCGATTTTTGGCTAAACCTCCAGGCGGCGGTTGATCTTTGGGAAGTTGAAAACAACATGCGCACCCAGGAAGAATTGGGACGGATTGAAACAGTGGCTGAATATTTGGCACGCCGTGAAGAGCGTGCAAAAAAGGTCGCGTAA", - "dna_sequence_length": 342, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_475", - "location": [ - [ - "NC_000913", - 508218, - "+", - 342 - ] - ], - "md5": "91d0a0054653cd87da8ff3a9af9151c7", - "parent_gene": "", - "protein_md5": "de0a7a3f6bb413800e313cbf0f79c5a3", - "protein_translation": "MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLARREERAKKVA", - "protein_translation_length": 113, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13246" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q59385" - ], - [ - "gene_synonym", - "copA" - ], - [ - "gene_synonym", - "ECK0478" - ], - [ - "gene_synonym", - "JW0473" - ], - [ - "gene_synonym", - "ASAP:ABE-0001681" - ], - [ - "gene_synonym", - "GI:16128468" - ], - [ - "gene_synonym", - "ybaR" - ], - [ - "gene_synonym", - "NP_415017.1" - ], - [ - "gene_synonym", - "GeneID:946106" - ], - [ - "gene_synonym", - "b0484" - ] - ], - "dna_sequence": "ATGTCACAAACTATCGACCTGACCCTGGACGGCCTGTCCTGCGGTCACTGCGTTAAACGCGTGAAAGAAAGTCTTGAACAGCGTCCGGATGTTGAGCAGGCGGATGTGTCTATCACTGAAGCGCACGTTACCGGGACTGCCAGTGCAGAACAGCTGATCGAAACCATCAAACAAGCGGGTTATGACGCATCTGTAAGCCACCCAAAGGCTAAACCGCTGGCGGAGTCATCAATCCCGTCGGAAGCACTGACAGCGGTTTCTGAGGCGCTTCCGGCAGCGACCGCCGATGACGATGACAGCCAGCAGTTGCTGCTGAGCGGCATGAGCTGCGCCAGCTGTGTCACCCGCGTACAAAATGCGCTGCAAAGCGTACCGGGCGTCACTCAGGCACGGGTAAACCTGGCGGAGCGTACTGCGCTGGTGATGGGCAGTGCCTCCCCACAAGATTTAGTGCAGGCGGTGGAAAAAGCGGGCTACGGCGCGGAAGCGATTGAAGATGACGCTAAACGCCGCGAGCGCCAGCAAGAAACCGCCGTCGCTACGATGAAGCGCTTCCGCTGGCAGGCAATTGTCGCACTGGCGGTGGGTATCCCGGTGATGGTCTGGGGGATGATCGGCGATAACATGATGGTCACCGCTGACAACCGCAGCCTGTGGTTGGTTATCGGCCTGATAACCCTGGCAGTGATGGTTTTCGCCGGCGGCCATTTTTACCGCAGTGCATGGAAAAGCCTGCTGAACGGTGCGGCGACGATGGATACGCTGGTGGCGCTGGGTACTGGCGTGGCGTGGCTCTATTCGATGAGCGTCAACCTGTGGCCGCAGTGGTTCCCGATGGAAGCGCGACATCTTTATTACGAAGCCAGCGCGATGATTATCGGTCTGATCAATCTCGGCCATATGCTGGAAGCGCGCGCACGCCAGCGTTCTTCTAAGGCGCTGGAAAAGTTACTCGATTTAACCCCGCCGACGGCACGCCTGGTTACTGACGAAGGTGAAAAAAGCGTGCCTCTGGCAGAAGTGCAGCCAGGTATGTTGCTGCGCCTGACGACCGGCGATCGCGTGCCGGTAGATGGCGAGATTACCCAGGGCGAAGCATGGCTGGATGAAGCGATGCTGACGGGCGAACCAATCCCGCAGCAAAAAGGCGAAGGCGATAGCGTCCATGCCGGGACAGTGGTACAGGACGGCAGTGTGCTGTTTCGTGCCAGTGCGGTTGGCAGCCATACTACGCTGTCACGAATCATTCGCATGGTGCGCCAGGCCCAGAGCAGCAAGCCAGAAATCGGTCAGCTGGCGGATAAAATCTCAGCCGTATTTGTGCCGGTAGTGGTGGTTATTGCGCTTGTCAGTGCGGCAATCTGGTATTTCTTTGGTCCGGCACCGCAGATTGTCTATACCCTGGTGATTGCCACCACGGTACTGATTATTGCCTGTCCGTGTGCGCTGGGGCTGGCGACGCCGATGTCGATTATTTCCGGCGTCGGGCGGGCGGCTGAGTTTGGCGTGCTGGTGCGGGACGCTGACGCGCTGCAACGCGCCAGTACACTCGACACTGTAGTGTTCGATAAAACCGGGACGCTGACTGAAGGGAAGCCGCAGGTTGTCGCAGTGAAAACATTTGCTGATGTTGATGAAGCGCAGGCATTGCGTCTGGCGGCGGCACTGGAGCAAGGTTCCAGCCATCCGCTGGCACGAGCGATCCTCGATAAAGCAGGTGATATGCAGCTACCGCAGGTCAACGGTTTCCGCACATTGCGCGGGCTGGGCGTGAGCGGTGAAGCTGAAGGTCATGCGTTATTGCTGGGCAATCAGGCGCTGTTAAATGAGCAACAGGTTGGTACCAAAGCTATCGAAGCGGAGATTACTGCTCAGGCATCGCAAGGGGCAACGCCTGTGCTGCTGGCGGTTGACGGGAAAGCGGTAGCCCTGCTGGCAGTACGCGATCCGTTGCGTAGTGATAGCGTGGCGGCGCTGCAACGCCTGCATAAAGCGGGATATCGTCTGGTGATGTTGACCGGGGATAACCCAACCACCGCCAATGCGATCGCCAAAGAAGCAGGGATTGATGAGGTGATCGCCGGGGTGCTGCCGGACGGTAAAGCCGAAGCGATCAAACATCTGCAAAGTGAAGGACGTCAGGTGGCAATGGTGGGCGACGGCATTAACGACGCGCCAGCGCTGGCTCAGGCGGATGTCGGCATTGCGATGGGTGGCGGCAGTGATGTTGCCATTGAAACCGCGGCGATTACCCTGATGCGCCATAGCCTGATGGGCGTTGCGGATGCGCTCGCTATTTCCCGCGCAACGCTGCACAACATGAAGCAGAACCTGCTCGGTGCGTTTATCTACAACAGTATCGGTATTCCGGTCGCCGCCGGTATTTTGTGGCCGTTCACTGGAACACTGCTTAACCCGGTAGTTGCCGGAGCGGCAATGGCGCTCTCGTCGATTACCGTAGTGAGTAACGCCAACCGGTTGCTGCGGTTTAAACCGAAGGAATAA", - "dna_sequence_length": 2505, - "functions": [ - "copper transporter" - ], - "id": "CDS_476", - "location": [ - [ - "NC_000913", - 511379, - "-", - 2505 - ] - ], - "md5": "faf01bae751344403862b1feb7ac1096", - "parent_gene": "", - "protein_md5": "0a0881ae63fe50c130e320dcbb1582b6", - "protein_translation": "MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVTGTASAEQLIETIKQAGYDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQLLLSGMSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEAIEDDAKRRERQQETAVATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSLWLVIGLITLAVMVFAGGHFYRSAWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARLVTDEGEKSVPLAEVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTVVFDKTGTLTEGKPQVVAVKTFADVDEAQALRLAAALEQGSSHPLARAILDKAGDMQLPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVGTKAIEAEITAQASQGATPVLLAVDGKAVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPDGKAEAIKHLQSEGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLHNMKQNLLGAFIYNSIGIPVAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE", - "protein_translation_length": 834, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13247" - ], - [ - "gene_synonym", - "ECK0479" - ], - [ - "gene_synonym", - "NP_415018.1" - ], - [ - "gene_synonym", - "JW0474" - ], - [ - "gene_synonym", - "glsA" - ], - [ - "gene_synonym", - "glsA1" - ], - [ - "gene_synonym", - "GI:16128469" - ], - [ - "gene_synonym", - "ASAP:ABE-0001688" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77454" - ], - [ - "gene_synonym", - "ybaS" - ], - [ - "gene_synonym", - "GeneID:946187" - ], - [ - "gene_synonym", - "b0485" - ] - ], - "dna_sequence": "ATGTTAGATGCAAACAAATTACAGCAGGCAGTGGATCAGGCTTACACCCAATTTCACTCACTTAACGGCGGACAAAATGCCGATTACATTCCCTTTCTGGCGAATGTACCAGGTCAACTGGCGGCAGTGGCTATCGTGACCTGCGATGGCAACGTCTATAGTGCGGGTGACAGTGATTACCGCTTTGCACTGGAATCCATCTCGAAAGTCTGTACGTTAGCCCTTGCGTTAGAAGATGTCGGCCCGCAGGCGGTACAGGACAAAATTGGCGCTGACCCGACCGGATTGCCCTTTAACTCAGTTATCGCCTTAGAGTTGCATGGCGGCAAACCGCTTTCGCCACTGGTAAATGCTGGCGCTATTGCCACCACCAGCCTGATTAACGCTGAAAATGTTGAACAACGCTGGCAGCGAATTTTACATATCCAACAGCAACTGGCTGGCGAGCAGGTAGCGCTCTCTGACGAAGTCAACCAGTCGGAACAAACAACCAACTTCCATAACCGGGCCATAGCCTGGCTGCTGTACTCCGCCGGATATCTCTATTGTGATGCAATGGAAGCCTGTGACGTGTATACCCGTCAGTGCTCCACGCTCCTCAATACTATTGAACTGGCAACGCTTGGCGCGACGCTGGCGGCAGGTGGTGTGAATCCGTTGACGCATAAACGCGTTCTTCAGGCCGACAACGTGCCGTACATTCTGGCCGAAATGATGATGGAAGGGCTGTATGGTCGCTCCGGTGACTGGGCGTATCGTGTTGGTTTACCGGGCAAAAGCGGTGTAGGTGGCGGTATTCTGGCGGTCGTCCCTGGAGTGATGGGAATTGCCGCGTTCTCACCACCGCTGGACGAAGATGGCAACAGTGTTCGCGGTCAAAAAATGGTGGCATCGGTCGCTAAGCAACTCGGCTATAACGTGTTTAAGGGCTGA", - "dna_sequence_length": 933, - "functions": [ - "glutaminase 1" - ], - "id": "CDS_477", - "location": [ - [ - "NC_000913", - 511641, - "+", - 933 - ] - ], - "md5": "e1aa4c6ea2eb3631838dff5a6f8b2c5c", - "parent_gene": "", - "protein_md5": "5694d78b07062d40c14aa4526ef3273d", - "protein_translation": "MLDANKLQQAVDQAYTQFHSLNGGQNADYIPFLANVPGQLAAVAIVTCDGNVYSAGDSDYRFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVIALELHGGKPLSPLVNAGAIATTSLINAENVEQRWQRILHIQQQLAGEQVALSDEVNQSEQTTNFHNRAIAWLLYSAGYLYCDAMEACDVYTRQCSTLLNTIELATLGATLAAGGVNPLTHKRVLQADNVPYILAEMMMEGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGIAAFSPPLDEDGNSVRGQKMVASVAKQLGYNVFKG", - "protein_translation_length": 310, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77400" - ], - [ - "gene_synonym", - "ECK0480" - ], - [ - "gene_synonym", - "JW0475" - ], - [ - "gene_synonym", - "ASAP:ABE-0001690" - ], - [ - "gene_synonym", - "EcoGene:EG13248" - ], - [ - "gene_synonym", - "NP_415019.1" - ], - [ - "gene_synonym", - "GI:16128470" - ], - [ - "gene_synonym", - "GeneID:945363" - ], - [ - "gene_synonym", - "b0486" - ], - [ - "gene_synonym", - "ybaT" - ] - ], - "dna_sequence": "ATGATGAACACGGAAGGTAATAACGGTAACAAACCTCTCGGTCTATGGAACGTCGTTTCCATCGGCATTGGGGCAATGGTGGGGGCGGGGATCTTCGCGCTGCTGGGGCAGGCTGCATTGCTAATGGAAGCCTCGACCTGGGTCGCCTTTGCTTTTGGCGGTATTGTGGCGATGTTTTCCGGTTATGCCTATGCGCGTCTGGGGGCGAGCTATCCCAGCAATGGCGGCATTATCGACTTCTTTCGTCGCGGATTAGGCAACGGCGTCTTTTCGCTGGCGCTCTCGTTACTGTACCTGTTGACGCTGGCGGTGAGCATCGCCATGGTCGCCCGTGCTTTTGGCGCTTATGCCGTGCAGTTTTTGCATGAAGGCAGCCAGGAGGAGCACCTTATTTTGCTCTACGCGTTGGGGATCATTGCGGTGATGACGCTTTTCAACTCCTTAAGCAACCATGCGGTAGGGCGGCTGGAAGTGATCCTCGTCGGCATTAAAATGATGATCCTGTTATTGCTGATTATTGCCGGTGTCTGGTCGCTGCAACCGGCGCATATTTCCGTCTCTGCGCCCCCCAGCTCCGGTGCGTTCTTCTCCTGTATTGGGATAACTTTCCTTGCCTATGCGGGCTTTGGCATGATGGCGAACGCGGCGGATAAAGTGAAAGATCCGCAGGTCATTATGCCACGGGCGTTTCTGGTGGCGATTGGCGTTACCACGTTGCTTTATATCTCGCTGGCACTGGTTTTGCTTAGCGATGTATCGGCATTAGAGTTAGAAAAATATGCCGATACCGCCGTAGCGCAGGCTGCTTCTCCGCTGCTCGGGCATGTGGGTTATGTGATCGTCGTCATCGGCGCTTTACTGGCGACGGCTTCAGCCATTAACGCGAACCTGTTCGCCGTGTTTAACATCATGGACAACATGGGCAGCGAACGCGAACTGCCGAAGCTAATGAATAAATCCCTGTGGCGGCAGAGTACCTGGGGCAACATTATTGTCGTGGTGTTGATTATGCTGATGACGGCGGCACTGAATTTAGGCTCACTCGCCAGCGTTGCCAGCGCCACCTTTTTGATTTGCTACCTGGCGGTGTTTGTGGTGGCGATCCGCCTGCGTCATGATATTCACGCCTCGTTGCCGATTCTTATCGTTGGTACGTTGGTGATGTTGTTGGTGATCGTTGGCTTTATCTACAGTCTGTGGTCCCAGGGTAGCCGTGCGTTGATATGGATTATTGGCTCACTCTTACTCAGCCTTATTGTGGCAATGGTCATGAAGCGCAATAAAACCGTATAA", - "dna_sequence_length": 1293, - "functions": [ - "putative amino acid transporter" - ], - "id": "CDS_478", - "location": [ - [ - "NC_000913", - 512576, - "+", - 1293 - ] - ], - "md5": "98e98106a15d02282150be9b6a0c8ce6", - "parent_gene": "", - "protein_md5": "1956a8e47f72b42f52110c328f394d60", - "protein_translation": "MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEASTWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTLAVSIAMVARAFGAYAVQFLHEGSQEEHLILLYALGIIAVMTLFNSLSNHAVGRLEVILVGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADKVKDPQVIMPRAFLVAIGVTTLLYISLALVLLSDVSALELEKYADTAVAQAASPLLGHVGYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVVLIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVIVGFIYSLWSQGSRALIWIIGSLLLSLIVAMVMKRNKTV", - "protein_translation_length": 430, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cueR" - ], - [ - "gene_synonym", - "ybbI" - ], - [ - "gene_synonym", - "GeneID:945332" - ], - [ - "gene_synonym", - "JW0476" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9G4" - ], - [ - "gene_synonym", - "ASAP:ABE-0001693" - ], - [ - "gene_synonym", - "EcoGene:EG13256" - ], - [ - "gene_synonym", - "NP_415020.1" - ], - [ - "gene_synonym", - "GI:16128471" - ], - [ - "gene_synonym", - "b0487" - ], - [ - "gene_synonym", - "ECK0481" - ] - ], - "dna_sequence": "ATGAACATCAGCGATGTAGCAAAAATTACCGGCCTGACCAGCAAAGCCATTCGCTTCTATGAAGAGAAGGGGCTGGTGACGCCGCCGATGCGCAGCGAAAACGGTTATCGCACCTACACGCAGCAGCATCTCAACGAACTGACCTTACTGCGCCAGGCACGGCAGGTGGGCTTTAACCTGGAAGAGAGCGGCGAGCTGGTGAATCTGTTTAACGACCCGCAGCGGCACAGCGCCGACGTCAAACGGCGCACGCTGGAGAAGGTGGCGGAGATCGAACGACACATTGAGGAGCTGCAATCCATGCGCGACCAGCTGCTGGCACTGGCGAATGCCTGCCCTGGCGATGACAGCGCCGACTGCCCGATTATCGAAAATCTCTCCGGCTGCTGTCATCATCGGGCAGGGTGA", - "dna_sequence_length": 408, - "functions": [ - "copper-responsive regulon transcriptional regulator" - ], - "id": "CDS_479", - "location": [ - [ - "NC_000913", - 513993, - "+", - 408 - ] - ], - "md5": "3b93e26fe9ae886813f2e4671cec7fc7", - "parent_gene": "", - "protein_md5": "d5ede7fa852bcbb40f345a0f77c2fb31", - "protein_translation": "MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACPGDDSADCPIIENLSGCCHHRAG", - "protein_translation_length": 135, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945126" - ], - [ - "gene_synonym", - "GI:145698226" - ], - [ - "gene_synonym", - "ybbJ" - ], - [ - "gene_synonym", - "ECK0482" - ], - [ - "gene_synonym", - "EcoGene:EG13257" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAS3" - ], - [ - "gene_synonym", - "NP_415021.2" - ], - [ - "gene_synonym", - "b0488" - ], - [ - "gene_synonym", - "ASAP:ABE-0001695" - ], - [ - "gene_synonym", - "JW5065" - ] - ], - "dna_sequence": "ATGATGGAGTTAATGGTCGTTCATCCACATATTTTCTGGCTCAGTCTCGGCGGTTTGCTGCTGGCAGCCGAGATGCTGGGCGGAAATGGTTATTTGTTGTGGAGCGGCGTGGCAGCGGTGATTACCGGCCTGGTGGTCTGGCTGGTGCCGCTGGGTTGGGAGTGGCAAGGGGTAATGTTTGCCATCCTGACGCTGCTCGCCGCCTGGCTGTGGTGGAAATGGTTGTCGCGGCGGGTGCGCGAACAAAAGCACAGCGATAGTCATTTAAACCAGCGCGGGCAGCAGCTGATTGGCCGACGTTTTGTGCTGGAATCTCCGCTGGTCAACGGGCGCGGTCATATGCGCGTCGGTGACAGTTCATGGCCTGTCAGCGCCAGCGAGGATCTCGGTGCAGGTACGCATGTTGAAGTCATTGCGATAGAAGGGATAACCCTACATATCCGAGCCGTCTCGTCTTAA", - "dna_sequence_length": 459, - "functions": [ - "inner membrane protein", - "stimulator of the QmcA suppressor of ftsH-htpX" - ], - "id": "CDS_480", - "location": [ - [ - "NC_000913", - 514859, - "-", - 459 - ] - ], - "md5": "0c9225611c79151b257e4ffbf924b8a3", - "parent_gene": "", - "protein_md5": "22cceb8ea8572d920b6ea0113afe5ddb", - "protein_translation": "MMELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGLVVWLVPLGWEWQGVMFAILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFVLESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLHIRAVSS", - "protein_translation_length": 152, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ybbK" - ], - [ - "gene_synonym", - "JW0478" - ], - [ - "gene_synonym", - "NP_415022.1" - ], - [ - "gene_synonym", - "EcoGene:EG13258" - ], - [ - "gene_synonym", - "ASAP:ABE-0001697" - ], - [ - "gene_synonym", - "ECK0483" - ], - [ - "gene_synonym", - "GeneID:947257" - ], - [ - "gene_synonym", - "qmcA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA53" - ], - [ - "gene_synonym", - "b0489" - ], - [ - "gene_synonym", - "GI:16128473" - ] - ], - "dna_sequence": "ATGCTTATCTTTATCCCGATTCTCATTTTTGTCGCGCTGGTCATTGTCGGCGCGGGTGTCAAAATCGTACCGCAGGGCTATCAGTGGACAGTAGAACGCTTTGGTCGCTATACCAAAACGTTACAGCCGGGGCTCAGTCTGGTGGTGCCGTTTATGGATCGCATTGGTCGCAAGATCAATATGATGGAGCAAGTGCTCGATATCCCTTCCCAGGAAGTTATCTCGAAAGATAACGCCAACGTTACCATCGACGCCGTGTGCTTTATTCAGGTGATTGACGCGCCGCGCGCGGCTTATGAAGTCAGCAATCTGGAGCTGGCGATCATCAACCTGACCATGACTAACATCCGTACCGTGCTGGGTTCAATGGAACTTGACGAAATGCTCTCTCAGCGCGACAGCATCAACTCACGCCTGCTGCGTATTGTCGATGAAGCCACCAACCCGTGGGGGATTAAAGTCACCCGTATTGAAATTCGCGACGTGCGCCCACCGGCAGAGCTTATCTCTTCAATGAACGCGCAGATGAAAGCGGAACGTACCAAACGCGCTTACATTCTTGAAGCGGAAGGGATCCGTCAGGCGGAAATCCTCAAAGCCGAAGGTGAAAAACAGTCGCAAATCCTGAAAGCGGAAGGCGAACGTCAGTCGGCGTTTTTACAGGCTGAAGCGCGTGAACGTTCCGCCGAAGCAGAAGCCCGCGCCACCAAAATGGTGTCTGAAGCTATCGCCTCCGGTGATATTCAGGCGGTGAACTACTTCGTAGCGCAGAAATACACCGAAGCGTTACAGCAGATCGGTTCCTCCAGTAACAGCAAAGTAGTGATGATGCCATTAGAGGCCAGCAGCCTGATGGGGTCGATTGCCGGGATTGCCGAGCTGGTGAAAGACAGCGCCAACAAACGGACTCAGCCATGA", - "dna_sequence_length": 918, - "functions": [ - "PHB domain membrane-anchored putative protease" - ], - "id": "CDS_481", - "location": [ - [ - "NC_000913", - 515773, - "-", - 918 - ] - ], - "md5": "3b460c06493a77e617472e4e0dca0153", - "parent_gene": "", - "protein_md5": "387f8d4713918680be5812f660828394", - "protein_translation": "MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSAFLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVMMPLEASSLMGSIAGIAELVKDSANKRTQP", - "protein_translation_length": 305, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0484" - ], - [ - "gene_synonym", - "ybbL" - ], - [ - "gene_synonym", - "b0490" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77279" - ], - [ - "gene_synonym", - "JW0479" - ], - [ - "gene_synonym", - "EcoGene:EG13259" - ], - [ - "gene_synonym", - "ASAP:ABE-0001703" - ], - [ - "gene_synonym", - "fetA" - ], - [ - "gene_synonym", - "GeneID:946990" - ], - [ - "gene_synonym", - "NP_415023.1" - ], - [ - "gene_synonym", - "GI:16128474" - ] - ], - "dna_sequence": "ATGCAGGAAAATAGTCCTTTGCTTCAGCTACAAAACGTAGGATATCTGGCGGGTGATGCGAAGATTCTTAATAACATCAATTTTTCGCTGCGTGCTGGCGAATTTAAGTTAATTACCGGTCCTTCTGGTTGTGGCAAAAGTACGCTGCTAAAAATAGTTGCTTCATTGATCAGCCCAACCAGCGGAACGTTACTGTTTGAAGGTGAGGATGTCAGCACACTAAAGCCAGAAATCTACCGCCAACAAGTCTCTTACTGCGCCCAGACACCGACGCTGTTTGGCGATACGGTATACGATAATCTGATCTTTCCCTGGCAGATCCGTAACCGGCAGCCTGACCCAGCCATTTTTCTCGATTTTCTCGAACGCTTCGCCTTGCCGGACAGCATTTTGACGAAGAATATCGCCGAGCTATCTGGTGGTGAAAAACAACGCATCTCATTGATTCGTAACCTGCAATTTATGCCGAAGGTTTTATTGCTGGATGAAATAACCAGTGCGCTGGATGAAAGTAATAAACATAACGTCAATGAGATGATCCATCGTTATGTGCGCGAGCAAAATATTGCCGTGCTGTGGGTGACACACGATAAAGACGAAATTAATCATGCGGATAAAGTGATTACACTGCAACCGCATGCCGGAGAAATGCAGGAAGCACGCTATGAACTCGCATAA", - "dna_sequence_length": 678, - "functions": [ - "iron export ABC transporter ATPase", - "peroxide resistance protein" - ], - "id": "CDS_482", - "location": [ - [ - "NC_000913", - 515919, - "+", - 678 - ] - ], - "md5": "00479e453bec3d22be7d2cda72774372", - "parent_gene": "", - "protein_md5": "78e737f41dea33e1d1e828d78a1f9822", - "protein_translation": "MQENSPLLQLQNVGYLAGDAKILNNINFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLIFPWQIRNRQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYELA", - "protein_translation_length": 225, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0485" - ], - [ - "gene_synonym", - "ybbM" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77307" - ], - [ - "gene_synonym", - "b0491" - ], - [ - "gene_synonym", - "GI:90111141" - ], - [ - "gene_synonym", - "GeneID:945137" - ], - [ - "gene_synonym", - "NP_415024.4" - ], - [ - "gene_synonym", - "fetB" - ], - [ - "gene_synonym", - "JW5066" - ], - [ - "gene_synonym", - "EcoGene:EG13260" - ], - [ - "gene_synonym", - "ASAP:ABE-0001705" - ] - ], - "dna_sequence": "ATGAACTCGCATAATATTACTAACGAATCATTAGCACTGGCATTAATGCTGGTGGTGGTGGCAATCTTAATTAGCCATAAAGAAAAACTGGCGCTGGAGAAAGATATTCTCTGGAGCGTCGGGCGAGCGATAATTCAGCTGATTATTGTCGGCTATGTGCTGAAGTATATTTTCAGCGTGGATGATGCCAGCCTGACATTATTGATGGTGTTATTTATCTGCTTTAATGCGGCGTGGAACGCGCAAAAACGCAGTAAATATATTGCTAAAGCTTTTATCTCATCGTTTATTGCCATTACGGTCGGGGCGGGAATTACCCTGGCGGTGCTGATTCTCTCAGGGTCGATTGAATTTATCCCGATGCAGGTGATCCCTATCGCCGGGATGATTGCCGGTAACGCCATGGTAGCGGTGGGGTTGTGTTACAACAATTTAGGGCAACGGGTCATTAGCGAACAGCAACAGATTCAGGAGAAACTGAGTCTTGGTGCGACGCCGAAGCAGGCTTCAGCGATATTGATTCGCGACAGTATTCGCGCGGCTTTAATTCCGACGGTCGATTCAGCAAAAACGGTTGGCTTAGTGAGTTTACCAGGAATGATGTCCGGGCTGATATTTGCCGGGATTGATCCGGTGAAGGCGATTAAATATCAGATTATGGTGACCTTTATGCTGCTCTCAACCGCCAGCTTGTCGACCATTATTGCCTGCTATTTAACCTATCGTAAGTTTTATAATTCGCGCCACCAGTTGGTGGTGACGCAATTGAAGAAGAAATGA", - "dna_sequence_length": 780, - "functions": [ - "iron export ABC transporter permease", - "peroxide resistance protein" - ], - "id": "CDS_483", - "location": [ - [ - "NC_000913", - 516583, - "+", - 780 - ] - ], - "md5": "2697f0ad5d1506ddf94745a2092f6c6e", - "parent_gene": "", - "protein_md5": "057c039d5e1ce6bca6144cf710d89113", - "protein_translation": "MNSHNITNESLALALMLVVVAILISHKEKLALEKDILWSVGRAIIQLIIVGYVLKYIFSVDDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVGAGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKLSLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASLSTIIACYLTYRKFYNSRHQLVVTQLKKK", - "protein_translation_length": 259, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ybbN" - ], - [ - "gene_synonym", - "ECK0486" - ], - [ - "gene_synonym", - "b0492" - ], - [ - "gene_synonym", - "GI:90111142" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77395" - ], - [ - "gene_synonym", - "GeneID:947119" - ], - [ - "gene_synonym", - "NP_415025.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0001707" - ], - [ - "gene_synonym", - "JW5067" - ], - [ - "gene_synonym", - "EcoGene:EG13261" - ] - ], - "dna_sequence": "ATGTCCGTAGAAAATATTGTCAACATTAACGAATCTAACCTGCAACAGGTTCTTGAACAGTCGATGACCACTCCGGTGCTGTTCTATTTTTGGTCTGAACGTAGCCAGCACTGTTTGCAGTTAACCCCAATTCTGGAAAGCCTCGCGGCGCAGTACAACGGGCAATTTATTCTGGCGAAGCTGGACTGCGACGCGGAGCAGATGATTGCCGCGCAGTTTGGTCTGCGTGCGATTCCGACCGTGTATCTGTTCCAGAACGGGCAACCGGTAGATGGCTTCCAGGGGCCGCAACCGGAAGAGGCGATCCGCGCCCTGCTGGATAAAGTGCTGCCGCGCGAAGAAGAGCTGAAAGCGCAGCAGGCGATGCAACTGATGCAGGAAAGCAATTACACCGATGCCCTGCCATTGCTGAAAGACGCCTGGCAGTTGTCGAATCAGAACGGGGAGATCGGCCTGCTGCTGGCAGAAACGCTGATTGCGCTGAACCGTTCTGAAGATGCGGAAGCGGTGCTGAAAACCATTCCGTTGCAGGATCAGGACACCCGCTACCAGGGGCTGGTGGCGCAAATCGAACTGCTGAAGCAGGCGGCTGATACGCCGGAAATTCAACAGTTGCAACAGCAGGTGGCGGAGAATCCAGAAGATGCCGCACTGGCGACGCAACTGGCGCTGCAACTGCATCAGGTTGGGCGCAATGAAGAGGCGCTGGAGTTGCTGTTCGGGCATCTGCGTAAAGATCTCACCGCCGCAGACGGTCAGACGCGTAAAACGTTCCAGGAGATCCTCGCTGCGCTGGGTACGGGTGATGCACTGGCGTCGAAGTATCGCCGCCAGCTGTATGCATTGTTGTATTGA", - "dna_sequence_length": 855, - "functions": [ - "DnaK co-chaperone, thioredoxin-like protein" - ], - "id": "CDS_484", - "location": [ - [ - "NC_000913", - 518279, - "-", - 855 - ] - ], - "md5": "c938b9d03af2aee3407c3f0cdea29b3f", - "parent_gene": "", - "protein_md5": "78e337f55c30e8db209d8c2c35083444", - "protein_translation": "MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQESNYTDALPLLKDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYRRQLYALLY", - "protein_translation_length": 284, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ybbO" - ], - [ - "gene_synonym", - "JW0482" - ], - [ - "gene_synonym", - "GeneID:945337" - ], - [ - "gene_synonym", - "ECK0487" - ], - [ - "gene_synonym", - "b0493" - ], - [ - "gene_synonym", - "NP_415026.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFP4" - ], - [ - "gene_synonym", - "ASAP:ABE-0001709" - ], - [ - "gene_synonym", - "EcoGene:EG13262" - ], - [ - "gene_synonym", - "GI:16128477" - ] - ], - "dna_sequence": "ATGACTCATAAAGCAACGGAGATCCTGACAGGTAAAGTTATGCAAAAATCGGTCTTAATTACCGGATGTTCCAGTGGAATTGGCCTGGAAAGCGCGCTCGAATTAAAACGCCAGGGTTTTCATGTGCTGGCAGGTTGCCGGAAACCGGATGATGTTGAGCGCATGAACAGCATGGGATTTACCGGCGTGTTGATCGATCTGGATTCACCAGAAAGTGTTGATCGCGCAGCCGACGAGGTGATCGCCCTGACCGATAATTGTCTGTATGGGATCTTTAACAATGCCGGATTCGGCATGTATGGCCCCCTTTCCACCATCAGCCGTGCGCAGATGGAACAGCAGTTTTCCGCCAACTTTTTCGGCGCACACCAGCTCACCATGCGCCTGTTACCCGCGATGTTACCGCACGGTGAAGGGCGTATTGTGATGACATCATCGGTGATGGGATTAATCTCCACGCCGGGTCGTGGCGCTTACGCGGCCAGTAAATATGCGCTGGAGGCGTGGTCAGATGCACTGCGCATGGAGCTGCGCCACAGCGGAATTAAAGTCAGCCTGATCGAACCCGGTCCCATTCGTACTCGCTTCACCGACAACGTCAACCAGACGCAAAGTGATAAACCAGTCGAAAATCCCGGCATCGCCGCCCGCTTTACGTTGGGACCGGAAGCGGTGGTGGACAAAGTACGCCATGCTTTTATTAGCGAGAAGCCGAAGATGCGCTATCCGGTGACGCTGGTGACCTGGGCGGTAATGGTGCTTAAGCGCCTGCTGCCGGGGCGCGTGATGGACAAAATATTGCAGGGGTGA", - "dna_sequence_length": 810, - "functions": [ - "putative oxidoreductase" - ], - "id": "CDS_485", - "location": [ - [ - "NC_000913", - 519149, - "-", - 810 - ] - ], - "md5": "3b6702e0e0eda88aa36c19ece582f9a9", - "parent_gene": "", - "protein_md5": "92659115632610ae29aaf90fb7e32ae9", - "protein_translation": "MTHKATEILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLAGCRKPDDVERMNSMGFTGVLIDLDSPESVDRAADEVIALTDNCLYGIFNNAGFGMYGPLSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVDKVRHAFISEKPKMRYPVTLVTWAVMVLKRLLPGRVMDKILQG", - "protein_translation_length": 269, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0494" - ], - [ - "gene_synonym", - "JW0483" - ], - [ - "gene_synonym", - "GeneID:945127" - ], - [ - "gene_synonym", - "NP_415027.1" - ], - [ - "gene_synonym", - "ECK0488" - ], - [ - "gene_synonym", - "tesA" - ], - [ - "gene_synonym", - "GI:16128478" - ], - [ - "gene_synonym", - "apeA" - ], - [ - "gene_synonym", - "ASAP:ABE-0001713" - ], - [ - "gene_synonym", - "pldC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADA1" - ], - [ - "gene_synonym", - "EcoGene:EG11542" - ] - ], - "dna_sequence": "ATGATGAACTTCAACAATGTTTTCCGCTGGCATTTGCCCTTCCTGTTCCTGGTCCTGTTAACCTTCCGTGCCGCCGCAGCGGACACGTTATTGATTCTGGGTGATAGCCTGAGCGCCGGGTATCGAATGTCTGCCAGCGCGGCCTGGCCTGCCTTGTTGAATGATAAGTGGCAGAGTAAAACGTCGGTAGTTAATGCCAGCATCAGCGGCGACACCTCGCAACAAGGACTGGCGCGCCTTCCGGCTCTGCTGAAACAGCATCAGCCGCGTTGGGTGCTGGTTGAACTGGGCGGCAATGACGGTTTGCGTGGTTTTCAGCCACAGCAAACCGAGCAAACGCTGCGCCAGATTTTGCAGGATGTCAAAGCCGCCAACGCTGAACCATTGTTAATGCAAATACGTCTGCCTGCAAACTATGGTCGCCGTTATAATGAAGCCTTTAGCGCCATTTACCCCAAACTCGCCAAAGAGTTTGATGTTCCGCTGCTGCCCTTTTTTATGGAAGAGGTCTACCTCAAGCCACAATGGATGCAGGATGACGGTATTCATCCCAACCGCGACGCCCAGCCGTTTATTGCCGACTGGATGGCGAAGCAGTTGCAGCCTTTAGTAAATCATGACTCATAA", - "dna_sequence_length": 627, - "functions": [ - "acyl-CoA thioesterase 1 and protease I and lysophospholipase L1" - ], - "id": "CDS_486", - "location": [ - [ - "NC_000913", - 519765, - "-", - 627 - ] - ], - "md5": "597029ecf4ff01b03cd10cd1fff387e1", - "parent_gene": "", - "protein_md5": "cacb2a3c455890e713cdc700f6ed12ea", - "protein_translation": "MMNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMSASAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVPLLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS", - "protein_translation_length": 208, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0495" - ], - [ - "gene_synonym", - "GeneID:945122" - ], - [ - "gene_synonym", - "JW0484" - ], - [ - "gene_synonym", - "EcoGene:EG11657" - ], - [ - "gene_synonym", - "NP_415028.1" - ], - [ - "gene_synonym", - "ybbA" - ], - [ - "gene_synonym", - "ECK0489" - ], - [ - "gene_synonym", - "GI:16128479" - ], - [ - "gene_synonym", - "ASAP:ABE-0001717" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9T8" - ] - ], - "dna_sequence": "ATGCCAGCGGAAAACATTGTTGAAGTTCATCATCTTAAGAAGTCCGTCGGTCAGGGGGAGCATGAACTCTCCATCCTCACCGGAGTTGAGCTGGTTGTCAAACGTGGCGAGACCATCGCACTGGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTACCCTTAACGCGCTGGAAAACGTCGAGCTTCCGGCTCTGCTGCGCGGTGAGAGTAGCGCGGAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGCTGGGTAAACGTCTGGATCATCTTCCGGCACAGCTTTCCGGCGGTGAACAGCAACGAGTGGCGCTGGCACGAGCCTTTAATGGTCGACCTGATGTGCTGTTTGCCGACGAACCCACCGGCAACCTTGACCGCCAGACGGGCGATAAAATTGCCGACCTGCTGTTTTCCCTCAACCGTGAACATGGCACCACGTTGATTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGA", - "dna_sequence_length": 687, - "functions": [ - "putative ABC transporter ATPase" - ], - "id": "CDS_487", - "location": [ - [ - "NC_000913", - 519733, - "+", - 687 - ] - ], - "md5": "890706ea5a4f8c4464e171e46e653083", - "parent_gene": "", - "protein_md5": "4f52cdecd6ba96f0da8386afa0a8d56d", - "protein_translation": "MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLRLVNGQLQEEA", - "protein_translation_length": 228, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415029.1" - ], - [ - "gene_synonym", - "b0496" - ], - [ - "gene_synonym", - "GeneID:945118" - ], - [ - "gene_synonym", - "JW0485" - ], - [ - "gene_synonym", - "ECK0490" - ], - [ - "gene_synonym", - "GI:16128480" - ], - [ - "gene_synonym", - "EcoGene:EG13263" - ], - [ - "gene_synonym", - "ASAP:ABE-0001720" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77504" - ], - [ - "gene_synonym", - "ybbP" - ] - ], - "dna_sequence": "ATGATTGCACGTTGGTTCTGGCGCGAATGGCGTTCGCCGTCGCTATTAATTGTCTGGCTGGCGCTAAGCCTGGCGGTGGCCTGCGTGCTGGCGCTGGGCAATATCAGCGATCGCATGGAGAAGGGCTTAAGCCAGCAAAGCCGTGAGTTTATGGCGGGCGATCGGGCGTTGCGCAGTTCACGCGAAGTGCCGCAAGCGTGGCTGGAGGAAGCGCAAAAGCGCGGCCTGAAAGTCGGCAAGCAGCTGACTTTCGCCACAATGACCTTTGCAGGCGACACACCGCAGCTGGCGAACGTCAAAGCGGTGGATGATATCTACCCGATGTATGGCGATCTGCAAACTAATCCCCCTGGCCTGAAACCGCAGGCGGGCAGCGTATTGCTGGCCCCACGCCTGATGGCACTGCTTAACCTGAAAACGGGCGACACCATTGACGTGGGCGATGCCACCTTGCGGATTGCCGGAGAAGTGATTCAGGAACCGGATTCCGGTTTTAACCCCTTCCAGATGGCTCCGCGTCTGATGATGAATCTGGCGGATGTCGATAAAACCGGAGCCGTGCAGCCGGGGAGTCGGGTCACCTGGCGTTATAAATTCGGCGGCAACGAGAACCAGCTCGACGGCTATGAGAAATGGTTGTTACCTCAGCTTAAACCCGAACAACGCTGGTACGGTCTGGAACAGGACGAAGGCGCGCTGGGGCGATCGATGGAACGCTCGCAACAGTTCCTGCTGCTTTCGGCGCTTCTGACCTTGCTGCTGGCAGTGGCAGCGGTGGCGGTAGCGATGAATCATTACTGTCGCAGTCGCTACGATCTGGTGGCGATCCTCAAAACGCTGGGGGCAGGGCGAGCGCAACTGCGTAAGCTAATCGTCGGTCAGTGGTTGATGGTGCTGACGCTTTCAGCCGTTACCGGTGGGGCCATAGGCCTGTTGTTCGAAAACGTGTTGATGGTGCTGCTCAAGCCCGTTCTGCCTGCTGCACTACCGCCAGCCAGCCTCTGGCCGTGGCTGTGGGCGCTTGGCACCATGACGGTCATCTCGCTGCTGGTGGGGCTACGACCATATCGCTTGTTGCTGGCAACGCAGCCTTTACGCGTATTACGTAATGATGTGGTAGCGAACGTCTGGCCGCTGAAGTTTTATCTGCCGATTGTCAGTGTGGTGGTTGTGCTGCTGCTCGCCGGATTAATGGGTGGCAGCATGCTGCTTTGGGCGGTGCTGGCGGGCGCGGTAGTACTGGCTTTGCTGTGCGGTGTGCTGGGCTGGATGCTGCTGAATGTACTTCGCCGCATGACGCTGAAATCGCTGCCTCTGCGCCTGGCGGTTAGCCGCCTGTTACGTCAGCCGTGGTCAACGTTAAGTCAGCTTTCGGCATTTTCGCTCTCCTTTATGCTGCTGGCACTGCTGCTGGTGTTGCGTGGCGATCTGCTCGACCGCTGGCAGCAGCAGCTACCTCCAGAAAGCCCGAACTACTTTTTAATTAACATCGCCACAGAACAGGTAGCACCGCTAAAAGCGTTCCTCGCGGAACATCAGATAGTCCCGGAATCGTTTTATCCGGTGGTGCGGGCGCGGCTGACGGCGATTAACGATAAGCCGACAGAAGGTAATGAAGATGAGGCGCTTAACCGCGAACTCAATCTTACCTGGCAAAATACGCGGCCCGATCATAATCCGATTGTCGCCGGTAACTGGCCGCCAAAAGCCGATGAAGTGTCGATGGAAGAGGGGCTGGCGAAACGCTTAAACGTTGCCCTCGGTGATACCGTGACTTTTATGGGCGATACCCAGGAGTTCCGCGCTAAAGTGACCAGCCTGCGCAAAGTGGACTGGGAAAGTCTGCGGCCTAATTTCTATTTTATTTTCCCTGAAGGGGCATTAGACGGGCAACCGCAGAGCTGGCTTACCAGTTTCCGCTGGGAGAATGGCAACGGCATGTTGACACAACTCAACCGCCAGTTCCCGACCATTAGCCTGTTAGATATTGGCGCGATTTTAAAACAGGTCGGTCAGGTGCTGGAGCAGGTAAGTCGGGCGCTGGAAGTGATGGTGGTACTGGTCACCGCCTGCGGTATGTTGCTGTTGCTGGCACAGGTGCAGGTGGGAATGCGTCAGCGTCATCAGGAGCTGGTGGTGTGGCGCACACTCGGTGCGGGGAAAAAACTGCTGCGTACCACGTTGTGGTGTGAGTTCGCCATGCTTGGGTTTGTTTCCGGCCTGGTGGCCGCAATTGGTGCGGAAACGGCGCTGGCAGTGTTGCAGGCGAAAGTGTTTGATTTTCCGTGGGAGCCAGACTGGCGATTGTGGATTGTTCTGCCGTGCAGCGGAGCGCTGCTGCTGTCGCTTTTCGGCGGCTGGCTGGGTGCGCGACTGGTTAAGGGTAAGGCGCTGTTCAGGCAGTTTGCGGGGTGA", - "dna_sequence_length": 2415, - "functions": [ - "putative ABC transporter permease" - ], - "id": "CDS_488", - "location": [ - [ - "NC_000913", - 520416, - "+", - 2415 - ] - ], - "md5": "2d55d899faf99ba5431003f2d257774d", - "parent_gene": "", - "protein_md5": "4cad79037f47d23a61b9af142ed8b851", - "protein_translation": "MIARWFWREWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLSQQSREFMAGDRALRSSREVPQAWLEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAVDDIYPMYGDLQTNPPGLKPQAGSVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVIQEPDSGFNPFQMAPRLMMNLADVDKTGAVQPGSRVTWRYKFGGNENQLDGYEKWLLPQLKPEQRWYGLEQDEGALGRSMERSQQFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAILKTLGAGRAQLRKLIVGQWLMVLTLSAVTGGAIGLLFENVLMVLLKPVLPAALPPASLWPWLWALGTMTVISLLVGLRPYRLLLATQPLRVLRNDVVANVWPLKFYLPIVSVVVVLLLAGLMGGSMLLWAVLAGAVVLALLCGVLGWMLLNVLRRMTLKSLPLRLAVSRLLRQPWSTLSQLSAFSLSFMLLALLLVLRGDLLDRWQQQLPPESPNYFLINIATEQVAPLKAFLAEHQIVPESFYPVVRARLTAINDKPTEGNEDEALNRELNLTWQNTRPDHNPIVAGNWPPKADEVSMEEGLAKRLNVALGDTVTFMGDTQEFRAKVTSLRKVDWESLRPNFYFIFPEGALDGQPQSWLTSFRWENGNGMLTQLNRQFPTISLLDIGAILKQVGQVLEQVSRALEVMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRTLGAGKKLLRTTLWCEFAMLGFVSGLVAAIGAETALAVLQAKVFDFPWEPDWRLWIVLPCSGALLLSLFGGWLGARLVKGKALFRQFAG", - "protein_translation_length": 804, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0497" - ], - [ - "gene_synonym", - "JW0486" - ], - [ - "gene_synonym", - "ECK0491" - ], - [ - "gene_synonym", - "GeneID:945116" - ], - [ - "gene_synonym", - "GI:16128481" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16919" - ], - [ - "gene_synonym", - "ASAP:ABE-0001724" - ], - [ - "gene_synonym", - "rhsD" - ], - [ - "gene_synonym", - "NP_415030.1" - ], - [ - "gene_synonym", - "EcoGene:EG10849" - ] - ], - "dna_sequence": "ATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGTCCGGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGCGAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAACGACAACGGCGGGCGGAGCATTCACTTTGAGCCGCTGCTGCCGGGGGAGGCGGTGTACAGCCGCAGTGAGTCAATGTGGCTGGTGCGCGGTGGTAAGGCAGCACAGCCGGACGGCCATACGCTGGCGCGGCTGTGGGGGGCGCTGCCGCCGGATATCCGGTTAAGCCCGCATCTTTACCTGGCGACCAACAGCGCACAGGGGCCGTGGTGGATACTGGGGTGGTCTGAGCGGGTGCCGGGTGCTGAGGACGTACTGCCAGCGCCGCTGCCGCCGTACCGGGTGCTTACCGGGATGGCGGACCGCTTCGGGCGGACGCTGACGTACCGGCGTGAGGCCGCCGGTGACCTGGCCGGGGAAATCACCGGCGTGACGGACGGTGCCGGGCGGGAGTTCCGTCTGGTGCTGACCACGCAGGCGCAGCGTGCGGAAGAGGCCCGCACCTCTTCGCTATCTTCTTCTGACAGTTCCCGCCCTCTCTCAGCCTCAGCGTTCCCCGACACACTGCCCGGTACCGAATACGGCCCCGACAGGGGTATCCGCCTTTCGGCGGTGTGGCTGATGCACGACCCGGCATACCCGGAGAGCCTGCCCGCTGCGCCACTGGTGCGGTACACGTATACGGAAGCCGGTGAACTGCTGGCGGTATATGACCGCAGCAATACGCAGGTGCGCGCTTTCACGTATGACGCGCAGCACCCGGGCCGGATGGTGGCGCACCGTTACGCGGGAAGGCCGGAGATGCGCTACCGCTACGACGATACGGGGCGGGTGGTGGAGCAACTGAACCCGGCAGGGTTAAGCTACCGCTATCTTTATGAGCAGGACCGCATCACCGTCACCGACAGCCTGAACCGGCGTGAGGTGCTGCATACAGAAGGCGGGGCCGGGCTGAAACGGGTGGTGAAAAAAGAACTGGCGGACGGCAGCGTCACGCGCAGCGGGTATGACGCGGCAGGAAGGCTCACGGCGCAGACGGACGCGGCGGGACGGAGGACAGAGTACGGTCTGAATGTGGTGTCCGGCGATATCACGGACATCACCACACCGGACGGGCGGGAGACGAAATTTTACTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGCGACGACAACGGATGCGACGGGCAGCACCCGGCAGATGACCTGGAGCCGCTACGGGCAGTTGCTGGCGTTCACCGACTGCTCGGGCTACCAGACCCGTTATGAATACGACCGCTTCGGCCAGATGACGGCGGTCCACCGCGAGGAAGGCATCAGCCTTTACCGCCGCTATGACAACCGTGGCCGGTTAACCTCGGTGAAAGACGCACAGGGCCGTGAAACGCGGTATGAATACAACGCCGCAGGCGACCTGACTGCCGTTATCACCCCGGACGGCAACCGGAGCGAGACACAGTACGATGCGTGGGGAAAGGCGGTCAGCACCACGCAGGGCGGGCTGACGCGCAGTATGGAGTACGATGCTGCCGGACGTGTCATCAGCCTGACCAACGAGAACGGCAGCCACAGCGTCTTCAGTTACGATGCGCTGGACCGGCTGGTACAGCAGGGCGGCTTTGACGGGCGGACGCAACGTTATCATTATGACCTGACCGGAAAACTCACACAGAGTGAGGATGAGGGACTTGTCATCCTCTGGTACTACGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCACGGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGGGGGAACTGCTGTGGCAGCATGAGACGAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGCCGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTGAGACGGTGCGCAGCTTCGGCAGCATGGCAGGCAGTAATGCCGCATACGAACTGACCAGCACATACACCCCCGCAGGCCAGTTACAGAGCCAGCACCTGAACAGCCTGGTATATGACCGTGACTACGGGTGGAGTGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGGATAACCGCATCGCGGAGGATGCGCACTATGTCTACCGCCACGATGAATACGGCAGGCTGACGGAGAAGACGGACCGCATCCCGGCGGGTGTGATACGGACGGACGACGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGCTGGGACGGAGACAGGCTGACGACGGTGCAGACTGACACCACACGTATCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGTTGCAGGGGCGGTATATTACTCAGGACCCGATGGGGTTGAAAGGGGGATGGAATTTATATCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGGAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGATGCTTTGAAAGAAACGCAGAATAGATCTCTATGTAATGATATGGAATACTCTGGTATTGTCTGTAAAGATACTAATGGAAAATATTTTGCATCTAAGGCAGAAACTGATAATTTAAGAAAGGAGTCATATCCTCTGAAAAGAAAATGTCCCACAGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGCATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAA", - "dna_sequence_length": 4281, - "functions": [ - "Rhs protein with DUF4329 family putative toxin domain", - "putative neighboring cell growth inhibitor" - ], - "id": "CDS_489", - "location": [ - [ - "NC_000913", - 523261, - "+", - 4281 - ] - ], - "md5": "de111a3f0f0dd4171c99065599e26b9d", - "parent_gene": "", - "protein_md5": "2bb38a108a5186f8d6762924828c151a", - "protein_translation": "MSGKPAARQGDMTQYGGPIVQGSAGVRIGAPTGVACSVCPGGMTSGNPVNPLLGAKVLPGETDLALPGPLPFILSRTYSSYRTKTPAPVGVFGPGWKAPSDIRLQLRDDGLILNDNGGRSIHFEPLLPGEAVYSRSESMWLVRGGKAAQPDGHTLARLWGALPPDIRLSPHLYLATNSAQGPWWILGWSERVPGAEDVLPAPLPPYRVLTGMADRFGRTLTYRREAAGDLAGEITGVTDGAGREFRLVLTTQAQRAEEARTSSLSSSDSSRPLSASAFPDTLPGTEYGPDRGIRLSAVWLMHDPAYPESLPAAPLVRYTYTEAGELLAVYDRSNTQVRAFTYDAQHPGRMVAHRYAGRPEMRYRYDDTGRVVEQLNPAGLSYRYLYEQDRITVTDSLNRREVLHTEGGAGLKRVVKKELADGSVTRSGYDAAGRLTAQTDAAGRRTEYGLNVVSGDITDITTPDGRETKFYYNDGNQLTAVVSPDGLESRREYDEPGRLVSETSRSGETVRYRYDDAHSELPATTTDATGSTRQMTWSRYGQLLAFTDCSGYQTRYEYDRFGQMTAVHREEGISLYRRYDNRGRLTSVKDAQGRETRYEYNAAGDLTAVITPDGNRSETQYDAWGKAVSTTQGGLTRSMEYDAAGRVISLTNENGSHSVFSYDALDRLVQQGGFDGRTQRYHYDLTGKLTQSEDEGLVILWYYDESDRITHRTVNGEPAEQWQYDGHGWLTDISHLSEGHRVAVHYGYDDKGRLTGECQTVENPETGELLWQHETKHAYNEQGLANRVTPDSLPPVEWLTYGSGYLAGMKLGGTPLVEYTRDRLHRETVRSFGSMAGSNAAYELTSTYTPAGQLQSQHLNSLVYDRDYGWSDNGDLVRISGPRQTREYGYSATGRLESVRTLAPDLDIRIPYATDPAGNRLPDPELHPDSTLTVWPDNRIAEDAHYVYRHDEYGRLTEKTDRIPAGVIRTDDERTHHYHYDSQHRLVFYTRIQHGEPLVESRYLYDPLGRRMAKRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTVQTDTTRIQTVYEPGSFTPLIRVETENGEREKAQRRSLAETLQQEGSENGHGVVFPAELVRLLDRLEEEIRADRVSSESRAWLAQCGLTVEQLARQVEPEYTPARKAHLYHCDHRGLPLALISEDGNTAWSAEYDEWGNQLNEENPHHVYQPYRLPGQQHDEESGLYYNRHRYYDPLQGRYITQDPMGLKGGWNLYQYPLNPLQQIDPMGLLQTWDDARSGACTGGVCGVLSRIIGPSKFDSTADAALDALKETQNRSLCNDMEYSGIVCKDTNGKYFASKAETDNLRKESYPLKRKCPTGTDRVAAYHTHGADSHGDYVDEFFSSSDKNLVRSKDNNLEAFYLATPDGRFEALNNKGEYIFIRNSVPGLSSVCIPYHD", 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"CDS_490", - "location": [ - [ - "NC_000913", - 527581, - "+", - 369 - ] - ], - "md5": "2c7b4eb7ceaeff0072ab7c8945f07251", - "parent_gene": "", - "protein_md5": "09c651c59dcbe42b31ccf97d0d5d7cf8", - "protein_translation": "MKYSSIFSMLSFFILFACNETAVYGSDENIIFMRYVEKLHLDKYSVKNTVKTETMAIQLAEIYVRYRYGERIAEEEKPYLITELPDSWVVEGAKLPYEVAGGVFIIEINKKNGCVLNFLHSK", - "protein_translation_length": 122, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0493" - ], - [ - "gene_synonym", - "ylbH" - ], - [ - "gene_synonym", - "GeneID:945114" - ], - [ - "gene_synonym", - "JW0488" - ], - [ - "gene_synonym", - "b0499" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77759" - ], - [ - "gene_synonym", - "rhsH" - ], - [ - "gene_synonym", - "EcoGene:EG14327" - ], - [ - "gene_synonym", - "ASAP:ABE-0001729" - ] - ], - "dna_sequence": "CTGGCGCTGATGGATGCGGATGGAAACATTGCGTGGAGCGGGGAGTATGATGAGTGGGGCAACCAGCTGAATGAAGAGAACCCGCATCACCTGCACCAGCCGTACCGGCTGCCGGGGCAGCAGTATGATAAGGAGTCGGGGCTGTACTACAACCGGAACCGGTACTACGATCCGTTGCAGGGGCGGTATATCACTCAGGACCCGATAGGGCTGGAGGGGGGATGGAGTCTGTATGCGTATCCGCTGAATCCGGTGAATGGTATTGATCCATTAGGGTTAAGTCCCGCAGATGTAGCGCTAATAAGAAGAAAAGATCAACTAAACCATCAAAGAGCATGGGATATATTATCTGATACTTATGAAGATATGAAGAGATTAAATTTAGGTGGGACTGATCAATTTTTCCATTGTATGGCATTTTGTCGAGTGTCTAAATTAAATGACGCTGGTGTTAGCCGATCGGCGAAAGGGCTGGGTTATGAAAAAGAGATTAGAGATTACGGGTTAAATCTGTTCGGTATGTACGGCAGAAAAGTAAAGCTATCCCATTCTGAAATGATTGAAGATAATAAAAAAGACTTGGCTGTAAATGACCATGGGTTGACATGTCCATCAACAACAGATTGCTCAGATAGATGTAGTGATTATATTAATCCAGAGCATAAAAAAACGATAAAGGCTTTACAAGATGCTGGCTATCTCAAGTAA", - "dna_sequence_length": 708, - "id": "CDS_491", - "location": [ - [ - "NC_000913", - 527952, - "+", - 708 - ] - ], - "md5": "cef38f69f5a5559386a0d644657970ef", - "parent_gene": "", - "protein_md5": "9371d73065115cec51a7b78e9f3b5513", - "protein_translation": "LALMDADGNIAWSGEYDEWGNQLNEENPHHLHQPYRLPGQQYDKESGLYYNRNRYYDPLQGRYITQDPIGLEGGWSLYAYPLNPVNGIDPLGLSPADVALIRRKDQLNHQRAWDILSDTYEDMKRLNLGGTDQFFHCMAFCRVSKLNDAGVSRSAKGLGYEKEIRDYGLNLFGMYGRKVKLSHSEMIEDNKKDLAVNDHGLTCPSTTDCSDRCSDYINPEHKKTIKALQDAGYLK", - "protein_translation_length": 235, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33669" - ], - [ - "gene_synonym", - "ECK0494" - ], - [ - "gene_synonym", - "ybbD" - ], - [ - "gene_synonym", - "GeneID:945133" - ], - [ - "gene_synonym", - "JW0489" - ], - [ - "gene_synonym", - "b0501" - ], - [ - "gene_synonym", - "EcoGene:EG11770" - ], - [ - "gene_synonym", - "ASAP:ABE-0001731" - ] - ], - "dna_sequence": "ATGCTGGCTATCTCAAGTAATCTATCAAAGATGATAATATTTATTTTTGCTATTATAATCATTGTTGTTTTATGCGTAATTACTTATCTTTATTTATACAAAGATGAATCTCTTGTAAGTAAACATTACATAAACTATATGGCAATACCAGAAAATGATGGAGTTTTTACATGGCTCCCAGATTTTTTTCCGCACGTAGCGGTGGATATATCAATATACACAAATGTAGAAGATGATTATTTTTTTCTTATTTTTCCCTAACAAATGATGATGGGGGTAGGTTTAAGAAAACATTGACAGTGAGGGCCAGGGAACAAGTGGCGAAAATCGTATCAAAGAATGATCCAGATACAAAAAAAGTGTGGTGTAAATATGGTAAGATACCAGGGCAAGGGGATGGTGTAAACCTTTTTTTTGTTGGTGAAATTAATGTTACGCATTATTTTATAACAAATATTGGAGCTGGATTGCCTGATGCTTGTGCAGAGTAA", - "dna_sequence_length": 491, - "id": "CDS_492", - "location": [ - [ - "NC_000913", - 528640, - "+", - 491 - ] - ], - "md5": "102f5f33d0b031d4f951590a73089935", - "parent_gene": "", - "protein_md5": "542173c6bb3a3c6015301be60f2e5133", - "protein_translation": "MLAISSNLSKMIIFIFAIIIIVVLCVITYLYLYKDESLVSKHYINYMAIPENDGVFTWLPDFFPHVAVDISIYTNVEDDYFFLIFP", - "protein_translation_length": 86, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ylbI" - ], - [ - "gene_synonym", - "GeneID:5625558" - ], - [ - "gene_synonym", - "EcoGene:EG14349" - ], - [ - "gene_synonym", - "ECK4441" - ], - [ - "gene_synonym", - "b4632" - ] - ], - "dna_sequence": "AGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGTACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACT", - "dna_sequence_length": 93, - "id": "CDS_493", - "location": [ - [ - "NC_000913", - 529500, - "+", - 93 - ] - ], - "md5": "9ee0d03e94ddf80cc2e85925bf0d5272", - "parent_gene": "", - "protein_md5": "0ff12282ecf0760e0f61fa44cb6ce67d", - "protein_translation": "SGKPAARQGDMPQYGGPIVQGSAGVLIVAPT", - "protein_translation_length": 31, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77688" - ], - [ - "gene_synonym", - "ECK0495" - ], - [ - "gene_synonym", - "ylbG" - ], - [ - "gene_synonym", - "b0502" - ], - [ - "gene_synonym", - "GeneID:946803" - ], - [ - "gene_synonym", - "EcoGene:EG14285" - ], - [ - "gene_synonym", - "JW5880" - ], - [ - "gene_synonym", - "ASAP:ABE-0001736" - ] - ], - "dna_sequence": "ATGCTTCATACTGCCAATCCCGTCATCAAACACAAAGCCGGTTTGCTCAATCTGGCTGAAGAACTCAGCAACGTATCAAAAGCCTGTAAAATCATGGGCGTTTCGCGTGATACGTTTTATCGTTACCGCGAACTGGTCGCTGAAGGCGGTGTGGATGCGCAGATTAATCGTAGTCGCCGCGCTCCTAACCTTAAGAACCGTACCGATGAGGCAACTGAACAGGCTGTTGTTGATTACGCCGTCGCTTTCCCGACACATGGTCAGCACCGGGCCAGCAACGAGCTGCGTAAACAGGGGGTTTTTATCTCCGACAGTGGTGTCCGTTCTGTCTGGTTACTCCATAACCTTGAGAATCTCCAAAAGACGATACTGAACAAATTTTATCAGGTGACGTTCCGTAAAAAGTTGTATGGAGTTCTCGAT", - "dna_sequence_length": 423, - "id": "CDS_494", - "location": [ - [ - "NC_000913", - 530016, - "-", - 357 - ], - [ - "NC_000913", - 529660, - "-", - 66 - ] - ], - "md5": "32727c8c27de934e21980e57abe16068", - "parent_gene": "", - "protein_md5": "0dc134a80c6f3a0d6a43950c3214a4f6", - "protein_translation": "MLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRTDEATEQAVVDYAVAFPTHGQHRASNELRKQGVFISDSGVRSVWLLHNLENLQKTILNKFYQVTFRKKLYGVLD", - "protein_translation_length": 141, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415036.1" - ], - [ - "gene_synonym", - "ECK0496" - ], - [ - "gene_synonym", - "EcoGene:EG11768" - ], - [ - "gene_synonym", - "JW0491" - ], - [ - "gene_synonym", - "selE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33667" - ], - [ - "gene_synonym", - "ybbB" - ], - [ - "gene_synonym", - "mnmH" - ], - [ - "gene_synonym", - "GeneID:947063" - ], - [ - "gene_synonym", - "GI:16128487" - ], - [ - "gene_synonym", - "b0503" - ], - [ - "gene_synonym", - "selU" - ], - [ - "gene_synonym", - "ASAP:ABE-0001740" - ] - ], - "dna_sequence": "ATGCAAGAGAGACACACGGAACAGGACTATCGTGCCCTGCTGATTGCTGATACGCCCATTATTGATGTTCGCGCCCCTATCGAGTTTGAGCACGGCGCAATGCCCGCCGCTATCAATCTGCCGTTAATGAATAACGATGAACGCGCCGCCGTTGGCACCTGCTATAAACAGCAAGGCTCAGACGCAGCGCTGGCGCTGGGACATAAACTGGTGGCGGGTGAAATTCGTCAGCAGCGCATGGACGCCTGGCGGGCAGCGTGCCTGCAAAATCCGCAAGGTATTCTCTGCTGCGCCCGTGGCGGTCAGCGCTCACATATTGTGCAAAGCTGGTTGCATGCAGCGGGGATTGATTATCCGCTGGTGGAAGGCGGTTATAAGGCACTGCGCCAGACCGCGATTCAGGCGACTATTGAACTGGCACAAAAACCGATAGTGCTGATTGGCGGTTGTACCGGCAGCGGTAAAACGCTGTTAGTGCAGCAACAGCCGAACGGTGTTGATCTGGAAGGGTTGGCGCGTCATCGCGGTTCGGCGTTTGGTCGCACGTTACAACCACAACTTAGCCAGGCGAGTTTTGAAAACCTGCTGGCTGCCGAAATGCTAAAAACCGACGCCCGTCAGAATTTGCGCCTGTGGGTGCTGGAAGACGAAAGCCGGATGATCGGTTCGAATCACCTGCCGGAATGCCTGCGCGAGCGAATGACTCAGGCGGCGATTGCGGTGGTAGAAGATCCGTTTGAGATCCGTCTTGAGCGCCTGAACGAAGAGTATTTCTTGCGTATGCATCATGATTTTACCCACGCGTACGGCGACGAACAGGGCTGGCAGGAGTATTGCGAATACCTGCATCACGGACTTTCGGCGATTAAGCGTCGGCTGGGGCTACAGCGCTATAACGAACTGGCTGCAAGGCTGGATGCAGCACTGACAACGCAACTCACCACCGGCAGCACCGACGGTCATCTGGCCTGGCTGGTGCCGTTACTTGAAGAATATTACGACCCGATGTATCGCTATCAGCTTGAGAAAAAAGCGGAAAAAGTTGTCTTTCGCGGTGAGTGGGCGGAAGTGGCGGAATGGGTTAAGGCGCGGTAA", 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"gene_synonym", - "b0504" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACR0" - ], - [ - "gene_synonym", - "allS" - ], - [ - "gene_synonym", - "GI:16128488" - ], - [ - "gene_synonym", - "EcoGene:EG13267" - ], - [ - "gene_synonym", - "glxA1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001742" - ] - ], - "dna_sequence": "ATGTTCGATCCAGAAACCTTGCGGACTTTCATTGCGGTTGCTGAAACAGGAAGTTTTTCAAAAGCGGCAGAACGATTATGTAAAACCACGGCGACGATCAGTTATCGCATTAAACTTCTGGAAGAGAATACCGGAGTAGCGCTGTTTTTCCGTACGACTCGCAGCGTGACGTTGACAGCGGCTGGCGAGCATCTACTTTCCCAGGCCAGAGACTGGCTGAGCTGGCTGGAAAGTATGCCAAGCGAGCTGCAACAGGTGAATGATGGCGTGGAACGCCAGGTGAATATTGTCATCAACAACCTGCTCTACAACCCCCAGGCCGTCGCCCAGTTGCTGGCGTGGCTGAATGAGCGTTACCCCTTTACCCAGTTTCACATCTCCCGACAAATCTATATGGGCGTCTGGGACTCGCTATTGTACGAAGGTTTTTCGCTGGCTATCGGCGTCACGGGAACTGAGGCGCTGGCAAATACCTTTAGTCTTGATCCCTTAGGATCGGTGCAATGGCGCTTTGTCATGGCGGCGGATCATCCGCTGGCGAACGTTGAAGAGCCGCTAACAGAAGCGCAGTTGCGGCGCTTTCCGGCGGTCAATATTGAAGACAGCGCCCGCACCTTAACCAAACGCGTCGCCTGGCGATTGCCAGGGCAAAAAGAGATTATTGTTCCCGATATGGAAACGAAAATCGCCGCCCATCTGGCGGGCGTTGGCATTGGTTTTTTGCCAAAATCGCTTTGCCAGTCAATGATCGATAATCAACAACTGGTCAGCCGGGTAATCCCAACGATGCGCCCTCCTTCGCCATTGAGTCTGGCATGGCGCAAATTTGGCAGCGGCAAAGCGGTAGAAGATATTGTGACCTTGTTTACCCAGCGCAGGCCGGAAATCAGCGGATTTTTAGAAATTTTCGGCAACCCACGCAGTTAA", - "dna_sequence_length": 927, - "functions": [ - "allD operon transcriptional activator" - ], - "id": "CDS_496", - "location": [ - [ - "NC_000913", - 532221, - "-", - 927 - ] - ], - "md5": "de7f96f2b4c2932297b69f636f5b423e", - "parent_gene": "", - "protein_md5": "a1ef8771fae9935051929a9f52b34c79", - "protein_translation": "MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTAAGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLLYNPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGFLPKSLCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKFGSGKAVEDIVTLFTQRRPEISGFLEIFGNPRS", - "protein_translation_length": 308, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0505" - ], - [ - "gene_synonym", - "ASAP:ABE-0001747" - ], - [ - "gene_synonym", - "NP_415038.1" - ], - [ - "gene_synonym", - "allA" - ], - [ - "gene_synonym", - "JW0493" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77731" - ], - [ - "gene_synonym", - "EcoGene:EG13615" - ], - [ - "gene_synonym", - "ECK0498" - ], - [ - "gene_synonym", - "GeneID:945141" - ], - [ - "gene_synonym", - "GI:16128489" - ], - [ - "gene_synonym", - "ybbT" - ], - [ - "gene_synonym", - "glxA2" - ] - ], - "dna_sequence": "ATGAAACTTCAGGTATTACCGTTAAGTCAGGAAGCCTTTAGTGCTTATGGCGACGTAATCGAAACGCAGCAACGGGATTTTTTCCATATTAACAATGGCCTGGTGGAGCGTTACCACGATTTGGCGCTGGTTGAGATTCTTGAGCAAGACTGTACGCTTATCAGCATTAACCGCGCGCAACCGGCGAATCTGCCGCTGACCATTCACGAACTCGAACGTCATCCGCTGGGTACTCAGGCCTTTATCCCGATGAAAGGTGAGGTGTTTGTGGTGGTCGTGGCGTTAGGTGACGACAAACCAGACCTGTCAACGCTGCGGGCGTTTATCACCAACGGCGAACAGGGAGTGAATTACCATCGTAACGTCTGGCATCACCCACTTTTCGCCTGGCAGCGCGTCACCGATTTTCTGACCATCGATCGCGGCGGCAGTGACAACTGTGATGTTGAAAGTATTCCTGAACAGGAACTCTGTTTTGCGTGA", - "dna_sequence_length": 483, - "functions": [ - "ureidoglycolate lyase, releasing urea" - ], - "id": "CDS_497", - "location": [ - [ - "NC_000913", - 532451, - "+", - 483 - ] - ], - "md5": "218b0caabfe45dc9e939f4ff27f49d98", - "parent_gene": "", - "protein_md5": "a1ff25a19b298fae4a3cf670f80155db", - "protein_translation": "MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALVEILEQDCTLISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA", - "protein_translation_length": 160, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0494" - ], - [ - "gene_synonym", - "NP_415039.1" - ], - [ - "gene_synonym", - "GeneID:945333" - ], - [ - "gene_synonym", - "EcoGene:EG13616" - ], - [ - "gene_synonym", - "b0506" - ], - [ - "gene_synonym", - "ECK0499" - ], - [ - "gene_synonym", - "allR" - ], - [ - "gene_synonym", - "GI:16128490" - ], - [ - "gene_synonym", - "ybbU" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACN4" - ], - [ - "gene_synonym", - "gclR" - ], - [ - "gene_synonym", - "glxA3" - ], - [ - "gene_synonym", - "ASAP:ABE-0001750" - ] - ], - "dna_sequence": "ATGACGGAAGTTAGACGGCGCGGCAGGCCAGGACAGGCGGAGCCTGTGGCACAGAAGGGCGCACAGGCGTTAGAGCGGGGAATTGCGATTCTGCAATATTTGGAAAAAAGTGGGGGAAGTTCGTCGGTTAGCGATATTTCTCTCAATCTGGATTTGCCGCTCTCCACGACCTTTCGCTTGCTGAAGGTTTTACAGGCAGCGGATTTTGTCTATCAGGACAGTCAATTAGGCTGGTGGCATATAGGATTAGGTGTCTTTAACGTCGGTGCGGCGTACATCCATAACCGCGATGTCCTCTCCGTCGCCGGGCCGTTTATGCGCCGCCTGATGTTACTTTCCGGCGAAACGGTCAATGTCGCGATCCGTAACGGCAATGAAGCGGTATTAATTGGTCAGTTAGAGTGTAAATCGATGGTCAGGATGTGTGCGCCACTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCGGTTTGCAGCAGTTTACGCCAACTACGCTTGTGGATATGCCCACCTTGCTGAAGGACCTGGAACAAGCGCGTGAACTGGGCTATACCGTAGATAAAGAAGAGCATGTTGTAGGTCTGAATTGCATAGCTTCAGCAATTTACGATGATGTCGGTAGTGTTGTTGCCGCTATCTCCATCTCCGGGCCTTCATCAAGACTGACAGAAGATCGTTTTGTCAGTCAGGGTGAGCTGGTCAGAGACACCGCCCGCGATATCAGCACGGCGTTGGGACTGAAAGCACATCCATAA", - "dna_sequence_length": 816, - "functions": [ - "glyoxylate-inducible transcriptional repressor of all and gcl operons" - ], - "id": "CDS_498", - "location": [ - [ - "NC_000913", - 533011, - "+", - 816 - ] - ], - "md5": "79ee68ddde63d51749874133cdaba4bc", - "parent_gene": "", - "protein_md5": "1d46f1a2f2ddb83eab40ce091ccca85a", - "protein_translation": "MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKALLYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP", - "protein_translation_length": 271, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0495" - ], - [ - "gene_synonym", - "NP_415040.1" - ], - [ - "gene_synonym", - "EcoGene:EG11583" - ], - [ - "gene_synonym", - "gcl" - ], - [ - "gene_synonym", - "b0507" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEP7" - ], - [ - "gene_synonym", - "ECK0500" - ], - [ - "gene_synonym", - "GI:16128491" - ], - [ - "gene_synonym", - "ASAP:ABE-0001754" - ], - [ - "gene_synonym", - "GeneID:945394" - ] - ], - "dna_sequence": "ATGGCAAAAATGAGAGCCGTTGACGCGGCAATGTATGTGCTGGAGAAAGAAGGTATCACTACCGCCTTCGGTGTTCCGGGAGCTGCAATCAATCCGTTCTACTCAGCGATGCGTAAGCACGGCGGTATTCGTCACATTCTGGCGCGTCATGTGGAAGGTGCTTCGCACATGGCGGAAGGTTATACCCGCGCAACGGCAGGGAATATCGGCGTATGTCTGGGGACTTCCGGTCCTGCGGGCACGGACATGATCACCGCGCTCTATTCCGCTTCTGCTGATTCCATTCCTATTCTGTGCATTACCGGCCAGGCACCGCGCGCCCGTCTGCATAAAGAAGATTTTCAGGCCGTAGATATTGAAGCAATTGCTAAACCGGTCAGCAAAATGGCGGTTACAGTTCGTGAAGCGGCGCTGGTGCCTCGCGTGCTGCAACAGGCATTTCACCTGATGCGTTCTGGTCGTCCGGGTCCGGTACTGGTGGATTTACCGTTCGACGTTCAGGTTGCGGAAATCGAGTTTGATCCTGACATGTACGAACCGCTGCCGGTCTACAAACCTGCTGCCAGCCGTATGCAGATCGAAAAAGCTGTAGAAATGTTAATCCAGGCCGAACGTCCGGTGATTGTTGCCGGGGGCGGGGTAATTAATGCTGACGCAGCTGCACTGTTACAACAGTTTGCTGAACTGACCAGCGTTCCGGTGATCCCAACGCTAATGGGCTGGGGCTGTATCCCGGACGATCATGAACTGATGGCCGGGATGGTGGGTCTGCAAACCGCGCATCGTTACGGTAACGCAACGCTGCTGGCGTCTGACATGGTGTTTGGTATCGGTAACCGTTTTGCTAACCGTCATACCGGCTCGGTAGAGAAATACACCGAAGGGCGCAAAATCGTTCATATTGATATTGAGCCGACGCAAATTGGTCGCGTGCTGTGTCCGGATCTCGGTATTGTCTCTGATGCTAAAGCGGCGCTGACACTGCTGGTTGAAGTGGCGCAGGAGATGCAAAAAGCGGGTCGTCTGCCGTGTCGTAAAGAATGGGTCGCCGACTGCCAGCAGCGTAAACGCACTTTGCTGCGCAAAACCCACTTCGACAACGTGCCGGTGAAACCGCAGCGCGTGTATGAAGAGATGAACAAAGCCTTTGGTCGCGATGTTTGTTATGTCACCACCATTGGTCTGTCACAAATCGCTGCGGCACAAATGCTGCATGTCTTTAAAGACCGCCACTGGATCAACTGTGGTCAGGCTGGTCCGTTAGGCTGGACGATTCCGGCTGCGCTAGGGGTTTGTGCCGCTGATCCGAAACGCAATGTGGTGGCGATTTCTGGCGACTTTGACTTCCAGTTCCTGATTGAAGAGTTAGCTGTTGGCGCGCAGTTCAACATTCCGTACATCCATGTGCTGGTCAACAACGCTTATCTGGGGCTGATTCGTCAGTCACAACGCGCTTTTGACATGGACTACTGCGTGCAACTCGCTTTCGAGAATATCAACTCCAGTGAAGTGAATGGCTACGGTGTTGACCACGTAAAAGTAGCGGAAGGTTTAGGTTGTAAAGCTATTCGGGTCTTCAAACCGGAAGATATTGCGCCAGCCTTTGAACAGGCGAAAGCCTTAATGGCGCAATATCGGGTACCGGTAGTCGTGGAAGTTATTCTCGAGCGTGTGACCAATATTTCGATGGGCAGCGAACTGGATAACGTCATGGAATTTGAAGATATCGCCGATAACGCAGCGGACGCACCGACTGAAACCTGCTTCATGCACTATGAATAA", - "dna_sequence_length": 1782, - "functions": [ - "glyoxylate carboligase" - ], - "id": "CDS_499", - "location": [ - [ - "NC_000913", - 533916, - "+", - 1782 - ] - ], - "md5": "aa5fc3c2fe1ade23738b679c2f08a04b", - "parent_gene": "", - "protein_md5": "961db20d98ade1633c6020c9993a76f5", - "protein_translation": "MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIRHILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITGQAPRARLHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLVDLPFDVQVAEIEFDPDMYEPLPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINADAAALLQQFAELTSVPVIPTLMGWGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFGIGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQEMQKAGRLPCRKEWVADCQQRKRTLLRKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTTIGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAISGDFDFQFLIEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVTNISMGSELDNVMEFEDIADNAADAPTETCFMHYE", - "protein_translation_length": 593, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0508" - ], - [ - "gene_synonym", - "GeneID:946186" - ], - [ - "gene_synonym", - "NP_415041.1" - ], - [ - "gene_synonym", - "gip" - ], - [ - "gene_synonym", - "ybbG" - ], - [ - "gene_synonym", - "hyi" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30147" - ], - [ - "gene_synonym", - "JW0496" - ], - [ - "gene_synonym", - "ECK0501" - ], - [ - "gene_synonym", - "ASAP:ABE-0001756" - ], - [ - "gene_synonym", - "GI:16128492" - ], - [ - "gene_synonym", - "EcoGene:EG11584" - ] - ], - "dna_sequence": "ATGTTACGTTTCTCTGCTAATTTATCGATGTTATTTGGAGAATATGATTTTCTCGCCCGTTTTGAGAAAGCTGCGCAGTGTGGTTTTCGCGGCGTTGAATTTATGTTTCCTTATGACTACGACATTGAAGAATTAAAACATGTGCTGGCGAGTAATAAACTCGAACATACGCTGCACAATTTACCGGCGGGTGACTGGGCGGCGGGGGAGCGCGGTATTGCCTGTATTCCTGGCCGTGAAGAAGAGTTTCGGGATGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAACAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTATTAACCATTTTGATATTCCTGGTTTCCATCTCACCGGAACTCGGCAGGCGCTGAAATTGATTGATGATGTTGGTTGCTGCAATTTGAAAATTCAGTATGACATTTATCATATGCAGCGGATGGAAGGTGAATTAACCAACACCATGACTCAGTGGGCTGATAAAATTGGTCACCTGCAAATTGCCGATAATCCGCATCGCGGCGAACCGGGAACCGGAGAAATTAATTATGATTATCTCTTTAAGGTAATCGAAAATTCTGACTACAACGGTTGGGTTGGGTGTGAATATAAACCCCAAACCACCACGGAAGCCGGTTTACGCTGGATGGATCCGTACCGTTAA", - "dna_sequence_length": 777, - "functions": [ - "hydroxypyruvate isomerase" - ], - "id": "CDS_500", - "location": [ - [ - "NC_000913", - 535710, - "+", - 777 - ] - ], - "md5": "db2dd2f7bff22fd7d0ddab6187d9761b", - "parent_gene": "", - "protein_md5": "1ae37ec6ee6c190f80e1e757b3e7fe0f", - "protein_translation": "MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFPYDYDIEELKHVLASNKLEHTLHNLPAGDWAAGERGIACIPGREEEFRDGVAAAIRYARALGNKKINCLVGKTPAGFSSEQIHATLVENLRYAANMLMKEDILLLIEPINHFDIPGFHLTGTRQALKLIDDVGCCNLKIQYDIYHMQRMEGELTNTMTQWADKIGHLQIADNPHRGEPGTGEINYDYLFKVIENSDYNGWVGCEYKPQTTTEAGLRWMDPYR", - "protein_translation_length": 258, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0509" - ], - [ - "gene_synonym", - "GeneID:945146" - ], - [ - "gene_synonym", - "glxB1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77161" - ], - [ - "gene_synonym", - "glxR" - ], - [ - "gene_synonym", - "NP_415042.1" - ], - [ - "gene_synonym", - "JW0497" - ], - [ - "gene_synonym", - "GI:16128493" - ], - [ - "gene_synonym", - "ASAP:ABE-0001759" - ], - [ - "gene_synonym", - "ECK0502" - ], - [ - "gene_synonym", - "EcoGene:EG13265" - ], - [ - "gene_synonym", - "ybbQ" - ] - ], - "dna_sequence": "ATGAAACTGGGATTTATTGGCTTAGGCATTATGGGTACACCGATGGCCATTAATCTGGCGCGTGCCGGTCATCAATTACATGTCACGACCATTGGACCGGTTGCTGATGAATTACTGTCACTGGGTGCCGTCAGTGTTGAAACTGCTCGCCAGGTAACGGAAGCATCGGACATCATTTTTATTATGGTGCCGGACACACCTCAGGTTGAAGAAGTTCTGTTCGGTGAAAATGGTTGTACCAAAGCCTCGCTGAAGGGCAAAACCATTGTTGATATGAGCTCCATTTCCCCGATTGAAACTAAGCGTTTCGCTCGTCAGGTGAATGAACTGGGCGGCGATTATCTCGATGCGCCAGTCTCCGGCGGTGAAATCGGTGCGCGTGAAGGGACGTTGTCGATTATGGTTGGCGGTGATGAAGCGGTATTTGAACGTGTTAAACCGCTGTTTGAACTGCTCGGTAAAAATATCACCCTCGTGGGCGGTAACGGCGATGGTCAAACCTGCAAAGTGGCAAATCAGATTATCGTGGCGCTCAATATTGAAGCGGTTTCTGAAGCCCTGCTATTTGCTTCAAAAGCCGGTGCGGACCCGGTACGTGTGCGCCAGGCGCTGATGGGCGGCTTTGCTTCCTCACGTATTCTGGAAGTTCATGGCGAGCGTATGATTAAACGCACCTTTAATCCGGGCTTCAAAATCGCTCTGCACCAGAAAGATCTCAACCTGGCACTGCAAAGTGCGAAAGCACTTGCGCTGAACCTGCCAAACACTGCGACCTGCCAGGAGTTATTTAATACCTGTGCGGCAAACGGTGGCAGCCAGTTGGATCACTCTGCGTTAGTGCAGGCGCTGGAATTAATGGCTAACCATAAACTGGCCTGA", - "dna_sequence_length": 879, - "functions": [ - "tartronate semialdehyde reductase, NADH-dependent" - ], - "id": "CDS_501", - "location": [ - [ - "NC_000913", - 536586, - "+", - 879 - ] - ], - "md5": "a7605e2641eb1122eaad63edb5077961", - "parent_gene": "", - "protein_md5": "1789572b041dafe54ac987870d68db11", - "protein_translation": "MKLGFIGLGIMGTPMAINLARAGHQLHVTTIGPVADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVSGGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALLFASKAGADPVRVRQALMGGFASSRILEVHGERMIKRTFNPGFKIALHQKDLNLALQSAKALALNLPNTATCQELFNTCAANGGSQLDHSALVQALELMANHKLA", - "protein_translation_length": 292, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13618" - ], - [ - "gene_synonym", - "NP_415044.4" - ], - [ - "gene_synonym", - "GeneID:945138" - ], - [ - "gene_synonym", - "ASAP:ABE-0001764" - ], - [ - "gene_synonym", - "glxB2" - ], - [ - "gene_synonym", - "b0511" - ], - [ - "gene_synonym", - "JW0499" - ], - [ - "gene_synonym", - "GI:90111144" - ], - [ - "gene_synonym", - "ECK0504" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75712" - ], - [ - "gene_synonym", - "allP" - ], - [ - "gene_synonym", - "ybbW" - ] - ], - "dna_sequence": "ATGGAACATCAGAGAAAACTATTCCAGCAACGCGGCTATAGCGAAGATCTATTGCCGAAAACGCAAAGCCAGCGGACCTGGAAAACATTTAACTATTTTACCTTATGGATGGGTTCGGTTCATAACGTTCCCAATTATGTGATGGTCGGCGGCTTTTTTATTCTCGGCTTGTCTACCTTTAGTATTATGCTGGCAATTATCCTCAGCGCCTTTTTCATTGCCGCGGTAATGGTATTAAACGGTGCTGCGGGCAGTAAATACGGTGTGCCTTTTGCCATGATCCTGCGTGCTTCTTACGGTGTACGTGGTGCACTGTTTCCCGGATTATTAAGGGGCGGAATTGCCGCCATCATGTGGTTTGGTTTGCAATGTTACGCGGGGTCACTGGCCTGCTTGATTCTGATTGGCAAAATCTGGCCGGGATTTTTAACTCTCGGTGGTGATTTCACTCTGTTAGGCCTTTCTCTACCGGGCTTAATTACTTTCTTAATCTTCTGGCTGGTCAACGTTGGTATAGGTTTTGGCGGTGGCAAAGTTTTAAATAAATTCACTGCCATTCTTAACCCGTGCATCTATATCGTTTTCGGCGGTATGGCGATTTGGGCGATTTCACTGGTCGGGATCGGTCCAATCTTTGACTACATTCCGAGCGGTATTCAGAAAGCAGAAAACGGTGGCTTCCTGTTCCTGGTGGTGATTAACGCGGTAGTTGCGGTCTGGGCGGCACCGGCGGTGAGCGCATCCGACTTTACGCAAAACGCCCACTCGTTTCGTGAGCAGGCGCTGGGGCAAACGCTGGGTTTAGTTGTGGCCTATATTCTGTTTGCGGTCGCCGGGGTATGTATTATTGCCGGAGCCAGTATTCACTACGGCGCTGATACCTGGAACGTGCTGGATATTGTTCAGCGTTGGGACAGCCTGTTCGCCTCGTTCTTTGCGGTACTGGTTATTCTGATGACAACTATCTCCACTAACGCGACCGGTAATATTATTCCAGCCGGTTATCAGATTGCCGCCATTGCACCGACAAAACTGACCTATAAAAACGGCGTACTGATTGCCAGTATTATCAGCTTGCTGATCTGCCCGTGGAAATTAATGGAAAATCAGGACAGCATTTATCTTTTCCTCGATATTATCGGCGGAATGCTTGGTCCGGTAATTGGTGTCATGATGGCGCATTATTTTGTGGTGATGCGCGGACAAATTAATCTTGATGAACTGTATACCGCACCTGGCGATTATAAATATTACGATAACGGTTTTAACCTCACTGCGTTTTCAGTAACTCTGGTGGCCGTTATTTTATCTCTTGGCGGTAAGTTTATTCACTTTATGGAACCGTTATCGCGTGTTTCATGGTTTGTCGGCGTCATCGTCGCCTTTGCGGCCTACGCCTTATTAAAGAAACGTACAACAGCAGAAAAAACAGGAGAGCAAAAAACCATAGGTTAA", - "dna_sequence_length": 1455, - "functions": [ - "putative allantoin transporter" - ], - "id": "CDS_502", - "location": [ - [ - "NC_000913", - 537633, - "+", - 1455 - ] - ], - "md5": "a8a83462509c84323433c4e098c0806e", - "parent_gene": "", - "protein_md5": "fd06856f24fd292f2cf4369261edaacf", - "protein_translation": "MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILGLSTFSIMLAIILSAFFIAAVMVLNGAAGSKYGVPFAMILRASYGVRGALFPGLLRGGIAAIMWFGLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLITFLIFWLVNVGIGFGGGKVLNKFTAILNPCIYIVFGGMAIWAISLVGIGPIFDYIPSGIQKAENGGFLFLVVINAVVAVWAAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFAVAGVCIIAGASIHYGADTWNVLDIVQRWDSLFASFFAVLVILMTTISTNATGNIIPAGYQIAAIAPTKLTYKNGVLIASIISLLICPWKLMENQDSIYLFLDIIGGMLGPVIGVMMAHYFVVMRGQINLDELYTAPGDYKYYDNGFNLTAFSVTLVAVILSLGGKFIHFMEPLSRVSWFVGVIVAFAAYALLKKRTTAEKTGEQKTIG", - "protein_translation_length": 484, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128496" - ], - [ - "gene_synonym", - "allB" - ], - [ - "gene_synonym", - "glxB3" - ], - [ - "gene_synonym", - "ASAP:ABE-0001768" - ], - [ - "gene_synonym", - "b0512" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77671" - ], - [ - "gene_synonym", - "GeneID:945134" - ], - [ - "gene_synonym", - "ECK0505" - ], - [ - "gene_synonym", - "JW0500" - ], - [ - "gene_synonym", - "ybbX" - ], - [ - "gene_synonym", - "EcoGene:EG13619" - ], - [ - "gene_synonym", - "NP_415045.1" - ] - ], - "dna_sequence": "ATGTCTTTTGATTTAATCATTAAAAACGGCACCGTTATTTTAGAAAACGAAGCTCGCGTTGTAGATATCGCCGTTAAAGGCGGAAAAATTGCTGCTATCGGTCAGGATCTGGGCGATGCAAAAGAAGTTATGGATGCGTCTGGTCTGGTGGTTTCGCCGGGCATGGTTGATGCGCACACCCATATTTCTGAACCGGGTCGTAGCCACTGGGAAGGTTATGAAACCGGTACTCGCGCAGCGGCAAAAGGTGGTATCACCACCATGATCGAAATGCCGCTCAACCAGCTGCCTGCAACGGTTGACCGCGCTTCAATTGAACTGAAGTTCGATGCCGCTAAAGGCAAGCTGACTATTGATGCGGCACAACTCGGTGGCCTGGTGTCTTACAACATCGACCGTCTGCATGAGCTGGATGAAGTGGGCGTTGTCGGCTTCAAATGCTTCGTTGCGACCTGTGGCGATCGCGGTATCGACAACGACTTCCGTGATGTAAACGACTGGCAGTTCTTCAAAGGTGCGCAGAAGCTGGGCGAACTGGGTCAGCCGGTGCTGGTGCACTGCGAAAACGCGCTGATTTGTGACGAACTGGGCGAAGAAGCGAAGCGTGAAGGTCGCGTAACCGCTCATGACTATGTGGCTTCGCGTCCGGTATTTACCGAAGTGGAAGCAATTCGCCGCGTACTGTATCTGGCGAAAGTTGCTGGTTGCCGTCTGCACGTTTGCCACGTCAGCAGCCCGGAAGGTGTTGAGGAAGTGACTCGTGCACGTCAGGAAGGTCAGGACGTTACTTGTGAATCCTGCCCGCATTACTTTGTACTGGATACCGATCAGTTCGAAGAAATCGGTACTCTGGCGAAGTGTTCACCGCCGATCCGCGATCTGGAAAACCAGAAAGGCATGTGGGAAAAACTGTTTAACGGTGAAATCGACTGCCTGGTTTCCGACCACTCTCCATGCCCGCCGGAAATGAAAGCCGGTAACATCATGAAAGCATGGGGCGGTATCGCCGGTCTGCAAAGCTGCATGGACGTGATGTTCGATGAAGCGGTACAGAAACGCGGTATGTCTCTGCCAATGTTCGGCAAATTAATGGCGACTAACGCAGCAGATATTTTCGGTCTGCAGCAAAAAGGCCGTATCGCCCCAGGAAAAGATGCCGACTTCGTCTTCATTCAGCCGAATAGCAGCTATGTTCTTACCAATGACGATCTGGAATATCGCCACAAAGTCAGCCCGTATGTTGGCCGTACCATTGGCGCGCGTATCACGAAAACCATCTTACGTGGTGATGTGATTTACGACATTGAACAGGGCTTCCCTGTTGCGCCGAAAGGTCAATTTATCCTTAAACATCAGCAGTAA", - "dna_sequence_length": 1362, - "functions": [ - "allantoinase" - ], - "id": "CDS_503", - "location": [ - [ - "NC_000913", - 539147, - "+", - 1362 - ] - ], - "md5": "6269ba8696d3cce0c36e5a8c573335b8", - "parent_gene": "", - "protein_md5": "843c3cd9ef110a3fcc545286cabd4b1b", - "protein_translation": "MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ", - "protein_translation_length": 453, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "glxB4" - ], - [ - "gene_synonym", - "ASAP:ABE-0001771" - ], - [ - "gene_synonym", - "EcoGene:EG13620" - ], - [ - "gene_synonym", - "b0513" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77328" - ], - [ - "gene_synonym", - "GI:90111145" - ], - [ - "gene_synonym", - "NP_415046.4" - ], - [ - "gene_synonym", - "JW0501" - ], - [ - "gene_synonym", - "ybbY" - ], - [ - "gene_synonym", - "ECK0506" - ], - [ - "gene_synonym", - "GeneID:945131" - ] - ], - "dna_sequence": "ATGTTCAATTTTGCAGTCAGCCGCGAAAGCCTGTTATCAGGATTTCAGTGGTTTTTCTTTATTTTTTGCAACACGGTTGTGGTTCCTCCTACGCTACTTTCTGCTTTTCAGTTGCCGCAAAGTAGCCTGCTTACGCTCACGCAATATGCTTTTCTTGCTACCGCACTGGCCTGCTTCGCTCAGGCGTTTTGCGGTCATCGTCGCGCTATTATGGAAGGGCCAGGTGGCCTGTGGTGGGGAACCATCCTTACTATCACCCTTGGTGAAGCATCGCGCGGGACACCGATCAACGATATCGCCACCAGCCTGGCAGTGGGGATTGCACTCTCCGGCGTGCTGACGATGTTGATTGGTTTTAGCGGATTAGGCCATCGCCTGGCACGGTTATTTACGCCGTCGGTGATGGTCTTGTTTATGTTGATGCTGGGCGCGCAGCTGACCACTATCTTTTTCAAAGGTATGCTCGGGCTGCCGTTTGGCATAGCCGACCCGAATTTTAAAATTCAGTTACCGCCGTTCGCGCTCTCGGTGGCGGTGATGTGCCTGGTACTGGCGATGATTATCTTCCTGCCGCAACGTTTTGCCCGTTATGGCCTGCTGGTCGGCACCATAACCGGCTGGTTGTTGTGGTACTTTTGCTTTCCTTCTTCGCACTCGCTCTCCGGTGAGTTGCACTGGCAGTGGTTCCCGCTCGGCAGTGGCGGTGCTTTGTCGCCGGGAATTATTCTGACGGCGGTGATTACAGGTCTGGTAAATATCAGCAATACCTACGGTGCGATTCGGGGCACGGATGTTTTTTATCCGCAGCAGGGCGCAGGGAATACGCGTTATCGTCGTAGCTTTGTGGCGACCGGATTTATGACGCTGATAACCGTACCGCTGGCGGTAATTCCATTTTCACCGTTTGTTTCATCCATTGGTTTATTAACCCAGACTGGCGATTACACGCGGCGTTCGTTTATTTATGGCAGCGTTATTTGCCTGCTGGTGGCGCTGGTTCCTGCACTCACGCGACTGTTTTGCAGTATCCCTTTACCCGTGAGTAGTGCGGTCATGCTGGTTTCTTATCTGCCTTTACTCTTTTCCGCGCTGGTGTTTAGCCAGCAAATAACGTTTACCGCTCGCAATATTTATCGACTCGCATTGCCGTTATTTGTCGGCATATTTTTAATGGCATTACCGCCTGTGTATCTGCAAGACCTTCCATTAACGCTTCGTCCTCTGCTCAGTAACGGCTTATTGGTCGGGATTTTACTGGCTGTTCTTATGGATAACCTTATTCCGTGGGAACGCATCGAATAA", - "dna_sequence_length": 1302, - "functions": [ - "putative uracil/xanthine transporter" - ], - "id": "CDS_504", - "location": [ - [ - "NC_000913", - 540565, - "+", - 1302 - ] - ], - "md5": "294058b126abd4498ca5ee8f46057b1a", - "parent_gene": "", - "protein_md5": "f5d8e143daa551145c79cb12dc0813be", - "protein_translation": "MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE", - "protein_translation_length": 433, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "glxB5" - ], - [ - "gene_synonym", - "EcoGene:EG13621" - ], - [ - "gene_synonym", - "ASAP:ABE-0001773" - ], - [ - "gene_synonym", - "NP_415047.1" - ], - [ - "gene_synonym", - "b0514" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77364" - ], - [ - "gene_synonym", - "GeneID:945129" - ], - [ - "gene_synonym", - "JW0502" - ], - [ - "gene_synonym", - "ECK0507" - ], - [ - "gene_synonym", - "ybbZ" - ], - [ - "gene_synonym", - "glxK" - ], - [ - "gene_synonym", - "GI:16128498" - ] - ], - "dna_sequence": "ATGAAGATTGTCATTGCGCCAGACTCTTTTAAAGAGAGCTTAAGTGCAGAAAAATGTTGTCAGGCAATTAAAGCCGGGTTTTCGACCCTCTTTCCCGATGCGAACTATATCTGTTTGCCGATAGCGGATGGCGGCGAAGGGACGGTGGATGCGATGGTCGCCGCGACGGGCGGCAACATCGTGACGCTTGAAGTCTGCGGGCCGATGGGCGAAAAAGTGAATGCTTTTTATGGCCTTACCGGCGACGGGAAAACGGCGGTGATTGAGATGGCGGCAGCAAGTGGCCTGATGCTGGTCGCGCCTGAAAAGCGTAATCCGTTGCTGGCCTCCAGTTTTGGTACGGGGGAGTTAATTCGTCATGCGCTGGATAACGACATTCGCCATATTATTCTCGGCATTGGCGGCAGTGCGACGGTCGACGGCGGTATGGGCATGGCGCAGGCGCTCGGTGTGCGTTTCCTTGATGCCGACGGTCAGGCGCTGGCGGCAAACGGTGGTAATTTAGCGCGCGTGGCAAGCATTGAGATGGATGAATGCGATCCGCGTCTGGCGAATTGCCATATTGAAGTAGCATGTGACGTTGATAACCCGCTGGTAGGGGCACGCGGCGCGGCGGCGGTGTTTGGCCCGCAAAAAGGGGCAACGCCGGAGATGGTCGAAGAACTTGAACAGGGGCTGCAAAATTACGCCCGTGTTTTACAACAGCAAACTGAAATTAATGTCTGCCAGATGGCGGGCGGCGGCGCTGCGGGCGGTATGGGTATTGCGGCGGCGGTATTTCTCAATGCGGATATTAAACCGGGCATTGAAATTGTGTTGAATGCGGTCAATCTTGCGCAGGCAGTGCAGGGCGCAGCACTGGTGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCAGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTATTCAGCATTTTGCCTCGTCTGGCACCTTTAGCCGAAGTGCTCGCCAGCGGTGAAACCAATCTCTTCAACAGCGCGCGAAATATTGCCTGCGCCATTAAAATAGGTCAGGGAATTAAAAACTAA", - "dna_sequence_length": 1146, - "functions": [ - "glycerate kinase II" - ], - "id": "CDS_505", - "location": [ - [ - "NC_000913", - 541888, - "+", - 1146 - ] - ], - "md5": "eb5f7b346ce1f93a8647bc0fe081275f", - "parent_gene": "", - "protein_md5": "ca9ea4441a92c22b915ae0115633eb43", - "protein_translation": "MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNDIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQALAANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN", - "protein_translation_length": 381, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ylbA" - ], - [ - "gene_synonym", - "ASAP:ABE-0001775" - ], - [ - "gene_synonym", - "glxB6" - ], - [ - "gene_synonym", - "EcoGene:EG13622" - ], - [ - "gene_synonym", - "GeneID:945149" - ], - [ - "gene_synonym", - "b0515" - ], - [ - "gene_synonym", - "allE" - ], - [ - "gene_synonym", - "ughY" - ], - [ - "gene_synonym", - "JW0503" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75713" - ], - [ - "gene_synonym", - "NP_415048.1" - ], - [ - "gene_synonym", - "ECK0508" - ], - [ - "gene_synonym", - "GI:16128499" - ] - ], - "dna_sequence": "ATGGGATATTTAAATAACGTCACCGGTTACCGCGAAGATTTACTGGCTAACCGTGCGATTGTTAAACACGGTAATTTCGCACTGTTAACCCCGGATGGTCTGGTAAAAAATATTATTCCGGGCTTTGAAAATTGTGACGCGACAATCCTCTCCACGCCAAAGCTGGGTGCCTCTTTTGTTGATTATCTGGTCACACTGCATCAAAACGGTGGCAACCAACAGGGCTTCGGTGGCGAAGGCATTGAAACGTTCCTGTATGTGATCTCTGGAAATATCACTGCCAAAGCCGAAGGCAAAACATTTGCCTTAAGCGAAGGTGGCTATCTTTATTGCCCGCCAGGCTCCTTAATGACGTTTGTTAACGCCCAGGCCGAAGACAGCCAAATCTTTTTATATAAGCGCCGCTATGTTCCGGTAGAAGGCTATGCACCGTGGCTGGTTTCTGGCAATGCCAGCGAACTGGAACGCATTCATTATGAAGGCATGGACGATGTTATTCTGCTGGATTTTCTGCCCAAAGAGTTAGGTTTTGATATGAACATGCATATCCTCTCTTTTGCACCAGGTGCCAGCCACGGTTATATCGAAACACACGTTCAGGAACACGGTGCCTATATTCTTTCCGGTCAGGGGGTTTATAACCTCGACAATAACTGGATCCCGGTGAAAAAAGGCGATTACATCTTTATGGGCGCTTATTCTTTACAGGCTGGTTATGGTGTAGGGCGTGGTGAAGCGTTCAGCTATATTTACTCGAAAGATTGTAACCGCGACGTAGAGATTTAA", - "dna_sequence_length": 786, - "functions": [ - "S-ureidoglycine aminohydrolase" - ], - "id": "CDS_506", - "location": [ - [ - "NC_000913", - 544046, - "-", - 786 - ] - ], - "md5": "a9e5cd4ebf3e938b8419ca1eb159114b", - "parent_gene": "", - "protein_md5": "9653e1d8690b5d25bdda3e247f40cca6", - "protein_translation": "MGYLNNVTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGYAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI", - "protein_translation_length": 261, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128500" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77425" - ], - [ - "gene_synonym", - "ASAP:ABE-0001777" - ], - [ - "gene_synonym", - "ylbB" - ], - [ - "gene_synonym", - "allC" - ], - [ - "gene_synonym", - "EcoGene:EG13623" - ], - [ - "gene_synonym", - "GeneID:945150" - ], - [ - "gene_synonym", - "b0516" - ], - [ - "gene_synonym", - "glxB7" - ], - [ - "gene_synonym", - "JW0504" - ], - [ - "gene_synonym", - "ECK0509" - ], - [ - "gene_synonym", - "NP_415049.1" - ] - ], - "dna_sequence": "ATGATTACACATTTCCGTCAAGCTATAGAAGAAACGCTGCCCTGGCTTTCCTCTTTTGGCGCTGACCCAGCGGGTGGGATGACCCGTTTACTTTATTCGCCGGAATGGCTGGAAACCCAGCAGCAATTTAAAAAAAGAATGGCAGCAAGCGGGCTGGAAACACGTTTCGATGAAGTGGGGAATTTATACGGTCGCCTGAATGGCACCGAATATCCACAGGAAGTGGTTCTGAGCGGTTCGCATATCGATACCGTGGTTAACGGCGGTAACCTTGACGGGCAATTCGGCGCGCTGGCGGCGTGGCTGGCAATTGACTGGCTGAAAACGCAATACGGCGCGCCGCTACGTACGGTCGAAGTGGTGGCGATGGCAGAAGAAGAAGGCAGCCGCTTCCCGTATGTCTTCTGGGGCAGTAAAAATATTTTTGGGCTGGCGAATCCTGACGACGTGCGGAATATCTGTGATGCCAAAGGAAATAGTTTTGTCGATGCGATGAAGGCTTGCGGATTTACTCTTCCGAACGCCCCACTAACTCCGCGTCAGGATATTAAAGCCTTTGTTGAACTGCATATTGAACAGGGCTGTGTGCTGGAAAGTAATGGGCAATCAATTGGCGTGGTGAATGCAATTGTCGGGCAGCGTCGTTATACGGTAACGCTGAACGGCGAATCAAACCATGCAGGCACCACGCCGATGGGTTATCGTCGTGATACAGTTTACGCTTTCAGTCGCATTTGCCATCAGTCGGTCGAAAAAGCGAAAAGGATGGGCGATCCGCTGGTTCTGACCTTTGGCAAAGTAGAGCCGCGCCCGAATACGGTAAATGTGGTGCCGGGTAAAACCACGTTCACCATTGATTGTCGTCATACCGACGCTGCCGTGCTGCGCGATTTCACCCAACAGTTAGAAAACGACATGCGGGCGATTTGCGATGAAATGGACATTGGTATTGATATCGATTTATGGATGGACGAAGAACCCGTGCCGATGAATAAGGAGCTGGTCGCCACCCTGACAGAATTGTGTGAAAGAGAAAAACTGAATTACCGGGTGATGCACAGTGGTGCCGGGCACGACGCGCAAATTTTCGCGCCTCGCGTACCAACCTGCATGATTTTTATCCCCAGCATCAACGGGATCAGCCATAACCCGGCGGAACGCACCAATATTACCGACCTTGCCGAAGGGGTCAAAACGTTGGCACTCATGCTTTATCAACTTGCCTGGCAGAAATAA", - "dna_sequence_length": 1236, - "functions": [ - "allantoate amidohydrolase" - ], - "id": "CDS_507", - "location": [ - [ - "NC_000913", - 545292, - "-", - 1236 - ] - ], - "md5": "3556d03e8a9be25f205e650c6585ba17", - "parent_gene": "", - "protein_md5": "ea0d6bc313bf389e37eaee4a2e55143a", - "protein_translation": "MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK", - "protein_translation_length": 411, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128501" - ], - [ - "gene_synonym", - "ylbC" - ], - [ - "gene_synonym", - "allD" - ], - [ - "gene_synonym", - "EcoGene:EG13624" - ], - [ - "gene_synonym", - "ASAP:ABE-0001780" - ], - [ - "gene_synonym", - "GeneID:948342" - ], - [ - "gene_synonym", - "glxB8" - ], - [ - "gene_synonym", - "b0517" - ], - [ - "gene_synonym", - "ECK0510" - ], - [ - "gene_synonym", - "NP_415050.1" - ], - [ - "gene_synonym", - "JW0505" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77555" - ] - ], - "dna_sequence": "ATGAAAATCAGTCGGGAAACACTCCACCAGCTAATTGAGAATAAACTCTGCCAGGCTGGGTTAAAACGTGAGCACGCTGCAACCGTGGCTGAAGTATTGGTTTACGCCGATGCCAGAGGGATCCACTCTCATGGCGCGGTGCGCGTGGAATACTACGCGGAACGCATTTCAAAAGGCGGCACCAACCGCGAACCGGAGTTTCGTCTTGAGGAAACCGGGCCGTGCTCGGCAATTTTACATGCCGACAATGCCGCCGGACAGGTCGCGGCGAAAATGGGTATGGAACATGCCATCAAAACCGCCCAGCAAAATGGCGTTGCGGTGGTCGGTATCAGCCGGATGGGTCACAGCGGCGCAATCTCTTATTTTGTGCAGCAGGCAGCCCGCGCCGGATTCATTGGCATTTCGATGTGCCAGTCCGATCCAATGGTGGTGCCGTTTGGCGGCGCGGAAATTTACTACGGTACTAACCCCCTGGCCTTTGCCGCGCCGGGAGAAGGCGACGAGATCCTTACCTTTGATATGGCGACTACCGTACAGGCATGGGGAAAAGTGCTCGACGCCCGCTCGCGTAATATGTCTATCCCGGATACCTGGGCGGTCGATAAAAACGGTGTACCAACAACCGATCCGTTCGCGGTACATGCTCTGCTCCCCGCCGCCGGGCCAAAAGGGTATGGCCTGATGATGATGATTGACGTCCTCTCAGGCGTCTTACTCGGCTTACCGTTCGGGCGACAGGTTAGTTCGATGTATGACGATTTACACGCAGGGCGTAATTTGGGGCAATTACATATAGTTATTAATCCGAACTTTTTCTCCTCCAGCGAATTATTCCGTCAACATCTTAGCCAGACCATGCGCGAATTAAATGCCATTACCCCCGCGCCCGGTTTTAATCAGGTTTATTATCCCGGACAGGATCAGGATATTAAACAACGCAAAGCCGCCGTCGAAGGCATCGAAATTGTTGATGATATTTACCAGTATTTAATTTCCGACGCGCTTTATAACACGTCATACGAAACGAAAAATCCCTTTGCGCAATAA", - "dna_sequence_length": 1050, - "functions": [ - "ureidoglycolate dehydrogenase" - ], - "id": "CDS_508", - "location": [ - [ - "NC_000913", - 546363, - "-", - 1050 - ] - ], - "md5": "4a4903add4dfafb449539fe582f11c59", - "parent_gene": "", - "protein_md5": "86e583f5cded803cc7db8e132e52dfa1", - "protein_translation": "MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQNGVAVVGISRMGHSGAISYFVQQAARAGFIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGVPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ", - "protein_translation_length": 349, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0518" - ], - [ - "gene_synonym", - "GI:16128502" - ], - [ - "gene_synonym", - "ylbD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47208" - ], - [ - "gene_synonym", - "ASAP:ABE-0001784" - ], - [ - "gene_synonym", - "NP_415051.1" - ], - [ - "gene_synonym", - "ECK0511" - ], - [ - "gene_synonym", - "JW0506" - ], - [ - "gene_synonym", - "fdrA" - ], - [ - "gene_synonym", - "GeneID:946298" - ], - [ - "gene_synonym", - "EcoGene:EG13399" - ] - ], - "dna_sequence": "ATGATCCACGCCTTTATTAAAAAAGGGTGTTTTCAGGATTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAGGGGTCAGGCAGCAGCCAGGCGTTGACGCAGGTGCGTCGCTGGGACAGTGCCTGTCAGAAATTACCCGATGCCAATCTGGCGCTGATTTCAGTGGCTGGCGAGTATGCGGCGGAGCTGGCAAACCAGGCGCTGGATCGCAACCTCAACGTGATGATGTTCTCCGATAACGTCACGCTGGAAGATGAAATCCAACTTAAAACCCGCGCGCGGGAAAAAGGCTTGCTGGTGATGGGGCCGGACTGCGGTACGTCGATGATTGCCGGCACACCGCTGGCTTTTGCTAACGTGATGCCGGAAGGCAATATTGGCGTCATTGGCGCTTCCGGTACCGGGATTCAGGAGCTGTGTTCGCAGATTGCGCTGGCAGGGGAGGGAATTACTCACGCGATTGGCCTTGGCGGGCGCGACCTCAGCCGTGAAGTGGGCGGCATCAGTGCGCTAACAGCGCTGGAAATGCTCAGTGCAGACGAGAAAAGCGAAGTGCTGGCATTTGTTTCAAAACCACCTGCCGAAGCTGTGCGTCTGAAAATTGTTAATGCCATGAAAGCAACCGGCAAACCGACGGTGGCGCTGTTTTTAGGTTATACCCCGGCGGTGGCCCGCGACGAGAATGTCTGGTTTGCCTCCTCGCTGGATGAGGCCGCACGCCTGGCTTGCCTGCTTTCACGCGTCACGGCGCGACGTAACGCAATAGCGCCTGTCAGCAGCGGATTTATTTGCGGTTTGTATACCGGCGGTACGCTGGCTGCCGAAGCGGCGGGATTACTTGCCGGACACCTTGGCGTGGAAGCCGACGATACCCATCAACATGGCATGATGCTGGACGCCGATAGCCACCAGATTATTGACCTCGGCGATGATTTCTACACCGTCGGGCGTCCCCATCCGATGATCGACCCAACCTTACGCAACCAGTTAATTGCCGATCTCGGCGCTAAACCGCAAGTGCGCGTGTTGCTGCTTGATGTCGTGATTGGCTTCGGTGCGACCGCCGATCCTGCCGCCTCGCTGGTGAGCGCCTGGCAAAAAGCCTGTGCCGCGCGTTTAGATAATCAACCACTGTATGCCATTGCCACGGTGACAGGCACTGAACGTGACCCGCAATGCCGCTCGCAGCAAATCGCCACGCTGGAAGATGCGGGGATTGCGGTCGTGAGTTCGCTACCGGAAGCCACCTTGCTGGCGGCAGCGTTAATTCATCCGCTCTCGCCTGCCGCACAGCAACACACACCGTCATTACTGGAAAACGTCGCCGTGATTAACATCGGATTACGCAGCTTTGCGCTGGAGCTACAAAGCGCCAGCAAACCGGTTGTGCATTACCAATGGTCGCCAGTCGCCGGTGGCAATAAAAAACTGGCTCGTTTATTAGAACGTTTGCAATAA", - "dna_sequence_length": 1668, - "functions": [ - "putative NAD(P)-binding acyl-CoA synthetase" - ], - "id": "CDS_509", - "location": [ - [ - "NC_000913", - 546680, - "+", - 1668 - ] - ], - "md5": "8e26a98cbe3c3e0a22b9586ec3689906", - "parent_gene": "", - "protein_md5": "158c8cf7e75062826c115ddb3eb90f36", - "protein_translation": "MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSPAAQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ", - "protein_translation_length": 555, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:4056025" - ], - [ - "gene_synonym", - "GI:635341461" - ], - [ - "gene_synonym", - "ylbE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77129" - ], - [ - "gene_synonym", - "b4572" - ], - [ - "gene_synonym", - "ASAP:ABE-0001787" - ], - [ - "gene_synonym", - "ECK0512" - ], - [ - "gene_synonym", - "ASAP:ABE-0285028" - ], - [ - "gene_synonym", - "JW0507" - ], - [ - "gene_synonym", - "ASAP:ABE-0285105" - ], - [ - "gene_synonym", - "EcoGene:EG13398" - ], - [ - "gene_synonym", - "JW0508" - ], - [ - "gene_synonym", - "YP_009029994.1" - ] - ], - "dna_sequence": "ATGTTTACATCAGTGGCGCAAGCCAATGCTGCGGTTATCGAACAAATTCGTCGCGCTCGTCCACACTGGCTGGATGTGCAACCGGCTTCTTCACTTATCAGCGAACTAAACGAGGGCAAAACACTGCTTCACGCCGGGCCGCCAATGCGCTGGCAGGAGATGACCGGACCCATGAAAGGGGCGTGCGTGGGCGCATGTCTGTTCGAAGGTTGGGCGAAAGATGAAGCGCAGGCGCTGGCAATACTGGAGCAGGGGGAAGTGAACTTCATTCCTTGTCACCATGTGAATGCCGTCGGGCCAATGGGCGGTATTACTTCTGCCAGTATGCCGATGCTGGTGGTTGAGAACGTGACCGACGGCAACCGGGCGTACTGCAACCTCAACGAAGGTATCGGCAAAGTGATGCGTTTTGGCGCTTACGGCGAAGATGTCCTGACTCGCCATCGCTGGATGCGCGATGTGTTAATGCCAGTATTAAGCGCGGCGCTGGGGCGCATGGAGCGCGGTATCGATCTCACGGCGATGATGGCGCAGGGCATTACGATGGGCGATGAGTTCCATCAACGCAATATTGCTTCCTCTGCACTGTTAATGCGTGCGCTGGCCCCACAAATTGCTCGCCTCGATCATGATAAACAGCACATCGCCGAAGTGATGGATTTCCTCAGCGTGACCGATCAGTTCTTCCTCAACCTCGCGATGGCTTACTGCAAGGCGGCGATGGATGCTGGCGCGATGATCCGCGCAGGCAGCATCGTCACGGCAATGACCCGCAACGGCAATATGTTCGGGATTCGGGTAAGCGGGCTGGGCGAACGCTGGTTTACTGCGCCTGTAAACACTCCGCAAGGTCTGTTTTTCACCGGCTTCTCGCAGGAGCAGGCGAACCCGGATATGGGCGATAGCGCGATTACCGAAACCTTTGGTATCGGAGGTGCGGCAATGATCGCAGCGCCTGGCGTAACGCGCTTTGTCGGTGCGGGTGGCATGGAAGCGGCAAGAGCGGTATCTGAAGAGATGGCGGAAATTTACCTTGAACGCAATATGCAGTTGCAGATCCCAAGCTGGGATTTTCAGGGCGCGTGCCTGGGGCTGGACATTCGTCGCGTGGTAGAAACCGGCATTACGCCACTCATCAATACCGGTATCGCCCATAAAGAGGCGGGGATCGGGCAGATTGGCGCAGGCACCGTGCGGGCACCGCTGGCGTGCTTTGAACAGGCGCTGGAAGCACTGGCTGAAAGCATGGGTATTGGTTGA", 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"gene_synonym", - "GeneID:945195" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAS5" - ], - [ - "gene_synonym", - "b0520" - ], - [ - "gene_synonym", - "ECK0513" - ], - [ - "gene_synonym", - "EcoGene:EG13626" - ], - [ - "gene_synonym", - "JW0509" - ] - ], - "dna_sequence": "ATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCACCGAATTATCGCCAGTCCTGGCGGTTAGCGGGAGTGTGGCGGCGGGCGATTAACCTGATGACGGAAAGCGGCGAACTGTTAACGTTGCATCGTCAGGGTAGTGGTTTCGGCCCCGGAGGATGGGTGCTTCGCCGTGCGCAATTCGATGCGTTATGCGGTGGATTATGCGGCAATGAACGACCACAGGTTGTGGCTCAAGGGATTCGCCTCGGGCGTTTCACGGTTAAACAGCCACAGCGTTATTGTTTGCTGCGTATTACGCCGCCTGCGCATCCTCAACCACTTGCAGCTGCATGGATGCAACGCGCGGAGGAAACCGGGCTTTTCGGGCCACTGGCGTTGGCGGCAAGCGATCCGCTGCCTGCTGAGTTACGCCAGTTTCGTCACTGTTTTCAGGCCGCGCTCAATGGCGTTAAGACCGACTGGCGGCACTGGCTGGGTAAAGGCCCCGGATTAACGCCGAGTCATGATGACACGCTGAGCGGAATGCTGCTGGCGGCCTGGTATTATGGCGCTTTAGATGCGCGCTCCGGTCGTCCGTTTTTTGCCTGTTCCGACAATCTGCAACTCGTTACCACAGCGGTGAGCGTCAGTTATTTACGTTATGCCGCGCAAGGATATTTCGCCTCGCCACTCCTGCACTTTGTTCATGCTCTGAGTTGCCCGAAACGTACCGCTGTTGCGATTGATTCGCTGCTGGCGCTGGGGCATACGTCAGGGGCAGATACGCTGCTGGGGTTCTGGCTTGGCCAACAATTATTACAAGGAAAACCATGA", - "dna_sequence_length": 816, - "functions": [ - "putative anaerobic allantoin catabolic oxamate carbamoyltransferase", - "DUF2877 family protein" - ], - "id": "CDS_511", - "location": [ - [ - "NC_000913", - 549627, - "+", - 816 - ] - ], - "md5": "44b8feda19fa3224570e993f2dfb2fbe", - "parent_gene": "", - "protein_md5": "24b3f9694278ddde3bb43f5ce379b36b", - "protein_translation": "MTIIHPLLASSSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRPFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP", - "protein_translation_length": 271, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128505" - ], - [ - "gene_synonym", - "b0521" - ], - [ - "gene_synonym", - "NP_415054.1" - ], - [ - "gene_synonym", - "ybcF" - ], - [ - "gene_synonym", - "GeneID:944972" - ], - [ - "gene_synonym", - "JW0510" - ], - [ - "gene_synonym", - "ECK0514" - ], - [ - "gene_synonym", - "arcC" - ], - [ - "gene_synonym", - "ASAP:ABE-0001791" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37306" - ], - [ - "gene_synonym", - "EcoGene:EG12384" - ] - ], - "dna_sequence": "ATGAAAACACTGGTTGTGGCTCTTGGGGGCAACGCCTTACTCCAGCGCGGTGAGGCGCTGACGGCAGAAAATCAATATCGCAATATCGCCAGTGCTGTACCCGCGCTGGCACGCCTGGCCCGTTCTTATCGGTTGGCGATTGTTCACGGCAACGGGCCGCAGGTGGGGCTGCTGGCATTGCAGAATCTGGCGTGGAAAGAGGTAGAACCGTATCCGCTGGATGTGCTGGTTGCGGAAAGCCAGGGGATGATTGGCTATATGCTGGCGCAGAGTTTGAGCGCACAGCCGCAGATGCCGCCCGTGACGACGGTGCTGACGCGCATTGAGGTTTCGCCTGATGATCCGGCGTTTTTGCAGCCAGAGAAATTTATTGGTCCGGTTTATCAGCCAGAAGAACAAGAGGCACTGGAAGCGGCTTACGGCTGGCAGATGAAACGTGATGGTAAATATTTGCGCCGGGTGGTGGCGTCTCCGCAACCGCGTAAAATTCTCGACAGCGAAGCCATCGAGTTGTTGCTCAAAGAGGGGCATGTGGTGATTTGCAGTGGCGGCGGCGGTGTGCCTGTGACGGATGACGGAGCAGGGAGTGAAGCAGTGATTGATAAAGATCTCGCCGCTGCGTTGCTCGCCGAGCAGATTAATGCAGATGGACTGGTGATCCTCACCGATGCTGATGCGGTATATGAAAACTGGGGAACGCCGCAGCAACGTGCCATTCGCCATGCCACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAG", - "dna_sequence_length": 894, - "functions": [ - "putative carbonate kinase" - ], - "id": "CDS_512", - "location": [ - [ - "NC_000913", - 550439, - "+", - 894 - ] - ], - "md5": "e9950a3155d15c77c6d1e4edaf85447b", - "parent_gene": "", - "protein_md5": "be1b61a748a405cdb772bfd530b52d23", - "protein_translation": "MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTDDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPNVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGTCISL", - "protein_translation_length": 297, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "purE2" - ], - [ - "gene_synonym", - "GeneID:945153" - ], - [ - "gene_synonym", - "GI:16128506" - ], - [ - "gene_synonym", - "EcoGene:EG10796" - ], - [ - "gene_synonym", - "ASAP:ABE-0001794" - ], - [ - "gene_synonym", - "JW0511" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09029" - ], - [ - "gene_synonym", - "b0522" - ], - [ - "gene_synonym", - "NP_415055.1" - ], - [ - "gene_synonym", - "ECK0515" - ], - [ - "gene_synonym", - "purK" - ] - ], - "dna_sequence": "ATGAAACAGGTTTGCGTCCTCGGTAACGGGCAGTTAGGCCGTATGCTGCGTCAGGCAGGCGAACCGTTAGGCATTGCTGTCTGGCCAGTCGGGCTGGACGCTGAACCGGCGGCGGTGCCTTTTCAACAAAGCGTGATTACCGCTGAGATAGAACGCTGGCCGGAAACCGCATTAACCCGCGAGCTGGCGCGCCATCCGGCCTTTGTGAACCGCGATGTGTTCCCGATTATTGCTGACCGTCTGACTCAGAAGCAGCTTTTCGATAAGCTCCACCTGCCGACTGCACCGTGGCAGTTACTTGCCGAACGCAGCGAGTGGCCTGCGGTGTTTGATCGTTTAGGTGAGCTGGCGATTGTTAAGCGTCGCACTGGTGGTTATGACGGTCGCGGTCAATGGCGTTTACGCGCAAATGAAACCGAACAGTTACCGGCAGAGTGTTACGGCGAATGTATTGTCGAGCAGGGCATTAACTTCTCTGGTGAAGTGTCGCTGGTTGGCGCGCGCGGCTTTGATGGCAGCACCGTGTTTTATCCGCTGACGCATAACCTGCATCAGGACGGTATTTTGCGCACCAGCGTCGCTTTTCCGCAGGCCAACGCACAGCAGCAGGCGCAAGCCGAAGAGATGCTGTCGGCGATTATGCAGGAGCTGGGCTATGTGGGCGTGATGGCGATGGAGTGTTTTGTCACCCCGCAAGGTCTGTTGATCAACGAACTGGCACCGCGTGTGCATAACAGCGGTCACTGGACACAAAACGGTGCCAGCATCAGCCAGTTTGAGCTGCATCTGCGGGCGATTACCGATCTGCCGTTACCGCAACCAGTGGTGAATAATCCGTCGGTGATGATCAATCTGATTGGTAGCGATGTGAATTATGACTGGCTGAAACTGCCGCTGGTGCATCTGCACTGGTACGACAAAGAAGTCCGTCCGGGGCGTAAAGTGGGGCATCTGAATTTGACCGACAGCGACACATCGCGTCTGACTGCGACGCTGGAAGCCTTAATCCCGCTGCTGCCGCCGGAATATGCCAGCGGCGTGATTTGGGCGCAGAGTAAGTTCGGTTAA", 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"EcoGene:EG10793" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG18" - ], - [ - "gene_synonym", - "ade" - ], - [ - "gene_synonym", - "ECK0516" - ], - [ - "gene_synonym", - "purE" - ], - [ - "gene_synonym", - "NP_415056.1" - ], - [ - "gene_synonym", - "Pur2" - ], - [ - "gene_synonym", - "GeneID:949031" - ] - ], - "dna_sequence": "ATGTCTTCCCGCAATAATCCGGCGCGTGTCGCCATCGTGATGGGGTCCAAAAGCGACTGGGCTACCATGCAGTTCGCCGCCGAAATCTTCGAAATCCTGAATGTCCCGCACCACGTTGAAGTGGTTTCTGCTCACCGCACCCCCGATAAACTGTTCAGCTTCGCCGAAAGCGCCGAAGAGAACGGTTATCAGGTGATTATTGCGGGCGCAGGCGGCGCAGCGCATCTGCCAGGCATGATTGCCGCCAAAACGCTGGTGCCGGTGCTGGGCGTGCCAGTACAGAGCGCCGCACTGAGCGGTGTCGATAGCCTCTACTCCATCGTACAAATGCCGCGCGGCATTCCGGTGGGTACGCTGGCGATTGGTAAAGCTGGCGCGGCAAACGCGGCGTTACTGGCAGCACAAATTCTTGCGACTCATGATAAAGAACTGCACCAGCGTCTGAATGACTGGCGCAAAGCCCAGACCGACGAAGTGCTGGAAAACCCGGACCCGCGAGGTGCGGCATGA", - "dna_sequence_length": 510, - "functions": [ - "N5-carboxyaminoimidazole ribonucleotide mutase" - ], - "id": "CDS_514", - "location": [ - [ - "NC_000913", - 553100, - "-", - 510 - ] - ], - "md5": "705f61ffbe2e1d20271f4b3b2c440ceb", - "parent_gene": "", - "protein_md5": "23739e0d7ba81c082008c3a9a94bcc78", - "protein_translation": "MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA", - "protein_translation_length": 169, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "lpxH" - ], - [ - "gene_synonym", - "EcoGene:EG12666" - ], - [ - "gene_synonym", - "NP_415057.1" - ], - [ - "gene_synonym", - "GI:16128508" - ], - [ - "gene_synonym", - "ybbF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P43341" - ], - [ - "gene_synonym", - "GeneID:949053" - ], - [ - "gene_synonym", - "JW0513" - ], - [ - "gene_synonym", - "ASAP:ABE-0001804" - ], - [ - "gene_synonym", - "b0524" - ], - [ - "gene_synonym", - "ECK0517" - ] - ], - "dna_sequence": "GTGGCGACACTCTTTATTGCAGATCTTCATCTCTGCGTGGAAGAACCGGCGATCACCGCCGGTTTTCTGCGTTTTTTAGCGGGGGAAGCCCGCAAGGCCGACGCGCTGTATATTCTTGGCGATCTGTTTGAAGCATGGATTGGCGACGACGATCCCAACCCACTCCATCGCAAGATGGCGGCGGCGATCAAAGCGGTGTCCGATTCCGGCGTTCCCTGTTATTTCATTCATGGCAACCGTGATTTTCTGCTCGGCAAACGCTTTGCCCGTGAAAGTGGCATGACGTTATTGCCGGAAGAAAAGGTGCTCGAACTTTATGGTCGCCGGGTGTTGATTATGCATGGCGACACGCTGTGCACCGATGACGCGGGTTATCAGGCTTTTCGCGCCAAGGTCCACAAACCCTGGCTGCAGACGCTATTCCTCGCCCTGCCGTTGTTTGTGCGCAAACGCATTGCCGCGCGAATGCGCGCGAACAGCAAAGAAGCCAACAGCAGTAAATCGCTGGCGATCATGGACGTTAACCAAAACGCGGTGGTCAGTGCGATGGAAAAACATCAGGTGCAATGGCTGATCCACGGGCATACCCATCGCCCGGCGGTGCATGAACTTATCGCCAATCAGCAACCTGCTTTTCGCGTGGTACTGGGTGCCTGGCATACGGAAGGTTCAATGGTGAAAGTCACGGCGGATGACGTTGAGCTGATTCATTTTCCGTTTTAA", - "dna_sequence_length": 723, - "functions": [ - "UDP-2,3-diacylglucosamine pyrophosphohydrolase" - ], - "id": "CDS_515", - "location": [ - [ - "NC_000913", - 553940, - "-", - 723 - ] - ], - "md5": "1d951ab1f4e6d38abe8d48a38274186d", - "parent_gene": "", - "protein_md5": "2f3e3a9a17f660309d192d6cf0f92163", - "protein_translation": "MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRKMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF", - "protein_translation_length": 240, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10758" - ], - [ - "gene_synonym", - "GI:16128509" - ], - [ - "gene_synonym", - "NP_415058.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001806" - ], - [ - "gene_synonym", - "JW0514" - ], - [ - "gene_synonym", - "GeneID:949038" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23869" - ], - [ - "gene_synonym", - "ECK0518" - ], - [ - "gene_synonym", - "ppiB" - ], - [ - "gene_synonym", - "b0525" - ] - ], - "dna_sequence": "ATGGTTACTTTCCACACCAATCACGGCGATATTGTCATCAAAACTTTTGACGATAAAGCACCTGAAACAGTTAAAAACTTCCTGGACTACTGCCGCGAAGGTTTTTACAACAACACCATTTTCCACCGTGTTATCAACGGCTTTATGATTCAGGGCGGCGGTTTTGAACCGGGCATGAAACAAAAAGCCACCAAAGAACCGATCAAAAACGAAGCCAACAACGGCCTGAAAAATACCCGTGGTACGCTGGCAATGGCACGTACTCAGGCTCCGCACTCTGCAACTGCACAGTTCTTCATCAACGTGGTTGATAACGACTTCCTGAACTTCTCTGGCGAAAGCCTGCAAGGTTGGGGCTACTGCGTGTTTGCTGAAGTGGTTGACGGCATGGACGTGGTAGACAAAATCAAAGGTGTTGCAACCGGTCGTAGCGGTATGCACCAGGACGTGCCAAAAGAAGACGTTATCATTGAAAGCGTGACCGTTAGCGAGTAA", - "dna_sequence_length": 495, - "functions": [ - "peptidyl-prolyl cis-trans isomerase B (rotamase B)" - ], - "id": "CDS_516", - "location": [ - [ - "NC_000913", - 554437, - "-", - 495 - ] - ], - "md5": "0c2874b61dbf6743655255550ad61a84", - "parent_gene": "", - "protein_md5": "f49aebeb90a4ad3a326badae55e4200e", - "protein_translation": "MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE", - "protein_translation_length": 164, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946969" - ], - [ - "gene_synonym", - "GI:16128510" - ], - [ - "gene_synonym", - "NP_415059.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21888" - ], - [ - "gene_synonym", - "EcoGene:EG10196" - ], - [ - "gene_synonym", - "JW0515" - ], - [ - "gene_synonym", - "b0526" - ], - [ - "gene_synonym", - "ASAP:ABE-0001810" - ], - [ - "gene_synonym", - "ECK0519" - ], - [ - "gene_synonym", - "cysS" - ] - ], - "dna_sequence": "ATGCTAAAAATCTTCAATACTCTGACACGCCAAAAAGAGGAATTTAAGCCTATTCACGCCGGGGAAGTCGGCATGTACGTGTGTGGAATCACCGTTTACGATCTCTGTCATATCGGTCACGGGCGTACCTTTGTTGCTTTTGACGTGGTTGCGCGCTATCTGCGTTTCCTCGGCTATAAACTGAAGTATGTGCGCAACATTACCGATATCGACGACAAAATCATCAAACGCGCCAATGAAAATGGCGAAAGCTTTGTGGCGATGGTGGATCGCATGATCGCCGAAATGCACAAAGATTTTGATGCTTTGAACATTCTGCGCCCGGATATGGAGCCGCGCGCGACGCACCATATCGCAGAAATTATTGAACTCACTGAACAACTGATCGCCAAAGGTCACGCTTATGTGGCGGACAACGGCGACGTGATGTTCGACGTCCCGACCGATCCAACTTATGGCGTGCTGTCGCGTCAGGATCTCGACCAGCTGCAGGCAGGCGCGCGCGTTGACGTGGTCGACGACAAACGCAACCCAATGGACTTCGTTCTGTGGAAGATGTCGAAAGAGGGCGAACCGAGCTGGCCGTCTCCGTGGGGCGCGGGTCGTCCTGGCTGGCACATTGAATGTTCGGCAATGAACTGCAAGCAGCTGGGTAACCACTTTGATATCCACGGCGGCGGTTCAGACCTGATGTTCCCGCACCACGAAAACGAAATCGCGCAGTCCACCTGTGCCCATGATGGTCAGTATGTGAACTACTGGATGCACTCGGGGATGGTGATGGTTGACCGCGAGAAGATGTCCAAATCGCTGGGTAACTTCTTTACCGTGCGCGATGTGCTGAAATACTACGACGCGGAAACCGTGCGTTACTTCCTGATGTCGGGCCACTATCGCAGCCAGTTGAACTACAGCGAAGAGAACCTGAAGCAGGCGCGTGCGGCGCTGGAGCGTCTCTACACTGCGCTGCGCGGCACAGATAAAACCGTTGCGCCTGCCGGTGGCGAAGCGTTTGAAGCGCGCTTTATTGAAGCGATGGACGACGATTTCAACACCCCGGAAGCCTATTCCGTACTGTTTGATATGGCGCGTGAAGTAAACCGTCTGAAAGCAGAAGATATGGCAGCGGCGAATGCAATGGCATCTCACCTGCGTAAACTTTCCGCTGTATTGGGCCTGCTGGAGCAAGAACCGGAAGCGTTCCTGCAAAGCGGCGCGCAGGCAGACGACAGCGAAGTGGCTGAGATTGAAGCGTTAATTCAACAGCGTCTGGATGCCCGTAAAGCGAAAGACTGGGCGGCGGCGGATGCGGCGCGTGATCGTCTTAACGAGATGGGGATCGTGCTGGAAGATGGCCCGCAAGGGACCACCTGGCGTCGTAAGTAA", 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"gene_synonym", - "ECK0520" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45570" - ], - [ - "gene_synonym", - "b0527" - ], - [ - "gene_synonym", - "EcoGene:EG12708" - ], - [ - "gene_synonym", - "ASAP:ABE-0001812" - ], - [ - "gene_synonym", - "JW0516" - ], - [ - "gene_synonym", - "NP_415060.1" - ] - ], - "dna_sequence": "ATGCCAACCGTTATTACGCACGCCGCCGTTCCCCTATGCATTGGTTTAGGGTTGGGTTCGAAAGTCATCCCTCCGCGTCTGTTATTTGCCGGAATCATCCTGGCGATGCTGCCCGACGCCGACGTATTGTCGTTTAAATTTGGCGTTGCTTACGGCAATGTTTTTGGTCATCGCGGGTTTACCCATTCGCTGGTGTTTGCGTTTGTTGTCCCGCTGTTATGTGTGTTTATTGGACGCCGATGGTTCAGGGCTGGGCTGATTCGCTGCTGGCTGTTTTTAACCGTCTCGTTGCTATCGCACAGCTTGCTGGATTCGGTAACCACTGGCGGTAAAGGCGTTGGCTGGCTGTGGCCGTGGTCAGATGAACGCTTTTTCGCTCCCTGGCAGGTGATAAAAGTCGCGCCGTTTGCATTGTCTCGTTACACCACGCCGTACGGGCATCAGGTGATTATTTCTGAATTGATGTGGGTGTGGTTGCCGGGGATGCTACTGATGGGAATGTTGTGGTGGCGCAGACGATAA", - "dna_sequence_length": 522, - "functions": [ - "DUF457 family inner membrane protein" - ], - "id": "CDS_518", - "location": [ - [ - "NC_000913", - 556553, - "-", - 522 - ] - ], - "md5": "5a60de74b8ff6d0e12285f48a411a11f", - "parent_gene": "", - "protein_md5": "3714041152f9e4513d50ba46fec255b0", - "protein_translation": "MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVFIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPGMLLMGMLWWRRR", - "protein_translation_length": 173, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12879" - ], - [ - "gene_synonym", - "ybcJ" - ], - [ - "gene_synonym", - "GeneID:945158" - ], - [ - "gene_synonym", - "ECK0521" - ], - [ - "gene_synonym", - "GI:90111146" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAS7" - ], - [ - "gene_synonym", - "ASAP:ABE-0001816" - ], - [ - "gene_synonym", - "b0528" - ], - [ - "gene_synonym", - "JW5070" - ], - [ - "gene_synonym", - "NP_415061.2" - ] - ], - "dna_sequence": "ATGGCGACATTTTCTTTAGGTAAACATCCGCACGTTGAGCTGTGCGACTTGCTGAAACTGGAAGGCTGGAGCGAAAGCGGCGCGCAGGCGAAAATCGCGATTGCCGAAGGCCAGGTGAAAGTCGACGGTGCGGTTGAAACGCGCAAACGCTGCAAAATCGTCGCCGGTCAGACAGTGAGTTTTGCAGGTCACAGCGTACAGGTTGTTGCCTGA", - "dna_sequence_length": 213, - "functions": [ - "ribosome-associated protein", - "putative RNA-binding protein" - ], - "id": "CDS_519", - "location": [ - [ - "NC_000913", - 556873, - "-", - 213 - ] - ], - "md5": "d1f38976cfb6781ced5dee2627960585", - "parent_gene": "", - "protein_md5": "be3bffad05a21fb01ce36039e534649b", - "protein_translation": "MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA", - "protein_translation_length": 70, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128513" - ], - [ - "gene_synonym", - "GeneID:945221" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24186" - ], - [ - "gene_synonym", - "ads" - ], - [ - "gene_synonym", - "ECK0522" - ], - [ - "gene_synonym", - "NP_415062.1" - ], - [ - "gene_synonym", - "folD" - ], - [ - "gene_synonym", - "b0529" - ], - [ - "gene_synonym", - "JW0518" - ], - [ - "gene_synonym", - "ASAP:ABE-0001818" - ], - [ - "gene_synonym", - "EcoGene:EG10328" - ] - ], - "dna_sequence": "ATGGCAGCAAAGATTATTGACGGTAAAACGATTGCGCAGCAGGTGCGCTCTGAAGTTGCTCAAAAAGTTCAGGCGCGTATTGCAGCCGGACTGCGGGCACCAGGACTGGCCGTTGTGCTGGTGGGTAGTAACCCTGCATCGCAAATTTATGTCGCAAGCAAACGCAAGGCTTGTGAAGAAGTCGGGTTCGTCTCCCGCTCTTATGACCTCCCGGAAACCACCAGCGAAGCGGAGCTGCTGGAGCTTATCGATACGCTGAATGCCGACAACACCATCGATGGCATTCTGGTTCAACTGCCGTTACCGGCGGGTATTGATAACGTCAAAGTGCTGGAACGTATTCATCCGGACAAAGACGTGGACGGTTTCCATCCTTACAACGTCGGTCGTCTGTGCCAGCGCGCGCCGCGTCTGCGTCCCTGCACCCCGCGCGGTATCGTCACGCTGCTTGAGCGTTACAACATTGATACCTTCGGCCTCAACGCCGTGGTGATTGGCGCATCGAATATCGTTGGCCGCCCGATGAGCATGGAACTGCTGCTGGCAGGTTGCACCACTACAGTGACTCACCGCTTCACTAAAAATCTGCGTCATCACGTAGAAAATGCCGATCTATTGATCGTTGCCGTTGGCAAGCCAGGCTTTATTCCCGGTGACTGGATCAAAGAAGGCGCAATTGTGATTGATGTCGGCATCAACCGTCTGGAAAATGGCAAAGTTGTGGGCGACGTCGTGTTTGAAGACGCGGCTAAACGCGCCTCATACATTACGCCTGTTCCCGGCGGCGTTGGCCCGATGACGGTTGCCACGCTGATTGAAAACACGCTACAGGCGTGCGTTGAATATCATGATCCACAGGATGAGTAA", - "dna_sequence_length": 867, - "functions": [ - "bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase" - ], - "id": "CDS_520", - "location": [ - [ - "NC_000913", - 557741, - "-", - 867 - ] - ], - "md5": "140d547c978e9aa28f2ce657c8a8759a", - "parent_gene": "", - "protein_md5": "92cbdcce384924185dd9edf958868746", - "protein_translation": "MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE", - "protein_translation_length": 288, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945522" - ], - [ - "gene_synonym", - "ASAP:ABE-0001825" - ], - [ - "gene_synonym", - "ECK0523" - ], - [ - "gene_synonym", - "EcoGene:EG13881" - ], - [ - "gene_synonym", - "NP_415063.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABW5" - ], - [ - "gene_synonym", - "GI:90111147" - ], - [ - "gene_synonym", - "fimA" - ], - [ - "gene_synonym", - "sfmA" - ], - [ - "gene_synonym", - "b0530" - ], - [ - "gene_synonym", - "JW0519" - ] - ], - "dna_sequence": "ATGAAATTAAGATTTATTTCGTCTGCGCTGGCTGCCGCACTATTCGCCGCTACGGGTAGTTATGCTGCCGTTGTAGATGGCGGTACAATTCACTTTGAAGGCGAACTGGTGAATGCTGCCTGTTCAGTGAATACTGACTCGGCAGACCAGGTTGTCACACTCGGTCAATATCGTACCGATATTTTCAATGCTGTTGGTAATACCTCTGCATTAATTCCATTCACCATTCAGTTGAACGACTGCGATCCTGTTGTTGCCGCTAATGCTGCCGTTGCATTTTCTGGTCAGGCTGATGCAATCAATGATAATTTATTGGCCATTGCATCCAGTACCAATACAACAACAGCAACGGGTGTCGGTATTGAAATACTTGATAATACATCCGCAATTCTCAAACCTGATGGGAATAGCTTCTCAACCAACCAGAACTTGATCCCCGGGACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAGGGCAAGCAAATGCTGACGCGACTTTTATTATGAGATATGAATAA", - "dna_sequence_length": 543, - "functions": [ - "FimA homolog, function unknown" - ], - "id": "CDS_521", - "location": [ - [ - "NC_000913", - 558212, - "+", - 543 - ] - ], - "md5": "7b688357ba2baf75b57377617fb96ce8", - "parent_gene": "", - "protein_md5": "d8b6dc9b6b16c07d82c1260cd9c31108", - "protein_translation": "MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE", - "protein_translation_length": 180, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945367" - ], - [ - "gene_synonym", - "GI:16128515" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77249" - ], - [ - "gene_synonym", - "ECK0524" - ], - [ - "gene_synonym", - "fimC" - ], - [ - "gene_synonym", - "ASAP:ABE-0001828" - ], - [ - "gene_synonym", - "b0531" - ], - [ - "gene_synonym", - "sfmC" - ], - [ - "gene_synonym", - "EcoGene:EG13882" - ], - [ - "gene_synonym", - "JW0520" - ], - [ - "gene_synonym", - "NP_415064.1" - ] - ], - "dna_sequence": "ATGATGACTAAAATAAAGTTATTGATGCTCATTATATTTTATTTAATCATTTCGGCCAGCGCCCATGCTGCCGGAGGGATCGCATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTATCGCGCATGAAATTATTTCTCCGTCCAATTCAATTACAAGAATTACCCGCAGAAGCGCCGGACACACTCAAGTTTTCGCGATCCGGTAACTATATCAATGTTCATAATCCATCACCTTTTTATGTCACCCTGGTTAACTTACAAGTGGGCAGCCAAAAGTTGGGGAATGCTATGGCTGCACCCAGAGTTAATTCACAAATTCCCTTACCCTCAGGAGTGCAGGGAAAGCTGAAATTTCAGACCGTTAATGATTATGGTTCAGTAACTCCGGTCAGAGAAGTGAACTTAAACTAA", - "dna_sequence_length": 693, - "functions": [ - "putative periplasmic pilus chaperone" - ], - "id": "CDS_522", - "location": [ - [ - "NC_000913", - 558974, - "+", - 693 - ] - ], - "md5": "58000748ddb33ee07c9c818981697448", - "parent_gene": "", - "protein_md5": "0f2e160654ea02ed170b76148c1c6487", - "protein_translation": "MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN", - "protein_translation_length": 230, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415065.1" - ], - [ - "gene_synonym", - "GI:16128516" - ], - [ - "gene_synonym", - "ECK0525" - ], - [ - "gene_synonym", - "EcoGene:EG13883" - ], - [ - "gene_synonym", - "sfmD" - ], - [ - "gene_synonym", - "fimD" - ], - [ - "gene_synonym", - "b0532" - ], - [ - "gene_synonym", - "GeneID:945160" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77468" - ], - [ - "gene_synonym", - "ASAP:ABE-0001830" - ], - [ - "gene_synonym", - "JW0521" - ] - ], - "dna_sequence": "ATGAAAATACCCACTACTACGGATATTCCGCAGAGGTATACCTGGTGTCTGGCCGGAATTTGTTATTCATCTCTTGCCATTTTACCCTCCTTTTTAAGCTATGCGGAAAGTTATTTCAACCCGGCATTTTTATTAGAGAATGGCACATCCGTTGCTGATTTATCGCGCTTTGAGAGAGGTAATCATCAACCTGCGGGCGTGTATCGGGTGGATCTCTGGCGTAATGATGAGTTCATTGGTTCGCAGGATATCGTATTTGAATCGACAACAGAAAATACAGGTGATAAATCAGGTGGGTTAATGCCCTGTTTTAACCAGGTACTTCTTGAACGAATTGGCCTTAATAGCAGTGCATTTCCCGAGTTAGCCCAGCAGCAAAACAATAAATGCATCAATTTACTGAAAGCTGTACCTGATGCCACAATTAACTTTGATTTTGCAGCGATGCGCCTGAACATCACTATTCCTCAGATAGCGTTGTTGAGTAGCGCTCACGGTTACATTCCGCCTGAAGAGTGGGATGAAGGTATTCCTGCTTTACTCCTGAATTATAATTTCACCGGTAACAGAGGTAATGGTAACGATAGCTATTTTTTTAGTGAGCTCAGCGGGATTAATATTGGCCCGTGGCGTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAGAACAGTGGAATAATATTGGCACCTGGGTACAGCGCGCCATTATTCCGCTGAAAAGTGAACTGGTAATGGGAGACGGCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGGCGCTTTTGAAATTACAGATTTGCACCCGACATCTTCAAATGGCGATCTGGACGTCACCATCGACGAGCGCGATGGCAATCAGCAGAATTACACAATTCCGTATTCAACAGTGCCAATTTTACAACGCGAAGGGCGTTTCAAATTTGACCTGACGGCGGGCGATTTTCGTAGCGGTAATAGTCAGCAATCATCGCCTTTCTTTTTTCAGGGTACGGCACTCGGCGGTTTACCACAGGAATTTACTGCCTACGGCGGGACGCAATTATCTGCCAATTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTGGATGTAACGCATGCGCGCAGTCAGTTAGCCGACGCCAGTCGTCATGAGGGGGATTCTATTCGCTTCCTCTATGCGAAATCGATGAACACCTTCGGCACCAATTTTCAGTTAATGGGTTACCGCTATTCGACACAAGGTTTTTATACCCTTGATGATGTTGCGTATCGTCGAATGGAGGGGTACGAATATGATTACGACGGTGAGCATCGCGATGAACCGATAATCGTGAATTACCACAATTTACGCTTTAGCCGTAAAGACCGTTTGCAGTTAAATGTTTCACAATCACTTAATGACTTTGGCTCGCTTTATATTTCTGGTACCCATCAAAAATACTGGAATACTTCGGATTCAGATACGTGGTATCAGGTGGGGTATACCAGCAGCTGGGTTGGCATCAGTTATTCGCTCTCATTTTCGTGGAATGAATCTGTAGGGATCCCCGATAACGAACGTATTGTCGGACTTAATGTTTCAGTGCCTTTCAATGTTTTGACCAAACGTCGCTACACCCGGGAAAATGCGCTCGACCGCGCTTATGCCTCCTTTAACGCCAACCGTAACAGCAACGGGCAAAATAGCTGGCTGGCAGGTGTAGGTGGGACCTTACTGGAAGGCCACAACCTGAGTTATCACGTAAGCCAGGGTGATACCTCGAATAATGGGTACACGGGCAGCGCCACGGCAAACTGGCAGGCCGCTTACGGTACGCTGGGGGGCGGGTATAACTACGACCGCGATCAACATGACGTTAACTGGCAGCTGTCTGGCGGTGTGGTCGGGCATGAAAATGGCATAACGCTGAGCCAGCCTTTAGGGGATACCAATGTTTTGATTAAAGCGCCTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTATGCGGTGATGCTGTATGCCACGGTTTATCGGTATAACCGTATCGCGCTTGATACCAATACGATGGGGAATTCCATCGATGTTGAAAAAAATATTAGCAGCGTTGTGCCGACGCAAGGCGCGTTGGTTCGTGCCAATTTTGATACCCGCATAGGCGTGCGGGCGCTCATTACCGTTACCCAGGGCGGAAAACCGGTGCCGTTTGGATCACTGGTACGGGAAAACAGTACCGGAATAACCAGTATGGTGGGTGATGACGGGCAAGTTTATTTAAGTGGTGCGCCATTGTCTGGTGAATTACTGGTTCAGTGGGGAGACGGCGCGAACTCACGCTGCATTGCGCACTATGTATTGCCGAAGCAAAGCTTACAGCAAGCCGTCACTGTTATTTCGGCAGTTTGCACACATCCTGGCTCATAA", - "dna_sequence_length": 2604, - "functions": [ - "putative outer membrane export usher protein" - ], - "id": "CDS_523", - "location": [ - [ - "NC_000913", - 559697, - "+", - 2604 - ] - ], - "md5": "05550df412151228650b03dbeea5c307", - "parent_gene": "", - "protein_md5": "7cf460cb639f3f18b7c0d051fe741d90", - "protein_translation": "MKIPTTTDIPQRYTWCLAGICYSSLAILPSFLSYAESYFNPAFLLENGTSVADLSRFERGNHQPAGVYRVDLWRNDEFIGSQDIVFESTTENTGDKSGGLMPCFNQVLLERIGLNSSAFPELAQQQNNKCINLLKAVPDATINFDFAAMRLNITIPQIALLSSAHGYIPPEEWDEGIPALLLNYNFTGNRGNGNDSYFFSELSGINIGPWRLRNNGSWNYFRGNGYHSEQWNNIGTWVQRAIIPLKSELVMGDGNTGSDIFDGVGFRGVRLYSSDNMYPDSQQGFAPTVRGIARTAAQLTIRQNGFIIYQSYVSPGAFEITDLHPTSSNGDLDVTIDERDGNQQNYTIPYSTVPILQREGRFKFDLTAGDFRSGNSQQSSPFFFQGTALGGLPQEFTAYGGTQLSANYTAFLLGLGRNLGNWGAVSLDVTHARSQLADASRHEGDSIRFLYAKSMNTFGTNFQLMGYRYSTQGFYTLDDVAYRRMEGYEYDYDGEHRDEPIIVNYHNLRFSRKDRLQLNVSQSLNDFGSLYISGTHQKYWNTSDSDTWYQVGYTSSWVGISYSLSFSWNESVGIPDNERIVGLNVSVPFNVLTKRRYTRENALDRAYASFNANRNSNGQNSWLAGVGGTLLEGHNLSYHVSQGDTSNNGYTGSATANWQAAYGTLGGGYNYDRDQHDVNWQLSGGVVGHENGITLSQPLGDTNVLIKAPGAGGVRIENQTGILTDWRGYAVMLYATVYRYNRIALDTNTMGNSIDVEKNISSVVPTQGALVRANFDTRIGVRALITVTQGGKPVPFGSLVRENSTGITSMVGDDGQVYLSGAPLSGELLVQWGDGANSRCIAHYVLPKQSLQQAVTVISAVCTHPGS", - "protein_translation_length": 867, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "sfmH" - ], - [ - "gene_synonym", - "NP_415066.2" - ], - [ - "gene_synonym", - "ECK0526" - ], - [ - "gene_synonym", - "ASAP:ABE-0001832" - ], - [ - "gene_synonym", - "b0533" - ], - [ - "gene_synonym", - "EcoGene:EG13884" - ], - [ - "gene_synonym", - "fimH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75715" - ], - [ - "gene_synonym", - "GI:145698227" - ], - [ - "gene_synonym", - "GeneID:945407" - ], - [ - "gene_synonym", - "JW5071" - ] - ], - "dna_sequence": "TTGGCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAATAGTACTGGCGTAGCAGAAGATGAACACTATGATCTCTCAAATATCTTTAATAGCACCAATAACCAGCCAGGGCAGATTGTTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGTACGCTGGTGAATTATACATACCGTAGTTATGTCACCAACTTTATTGTTCAGGAAACTATCGATAATTATAAATATATGCAATTACATGATTATCTATTAGGTGCGATGAGTCTGGTTGATAGTGTGATGGATATTCAGTTCCCCCCGCAAAATTATATTCGGATGGGAACAGATCCTAACGTTTCGCAAAACCTTCCATTCGGGGTGATGGATTCTCGTTTAATATTTCGTTTAAAGGTTATTCGTCCCTTTATTAACATGGTGGAGATCCCCAGACAGGTGATGTTTACCGTGTATGTGACATCAACGCCTTACGATCCGTTGGTTACACCTGTTTATACCATTAGTTTTGGTGGCCGGGTTGAAGTACCGCAAAACTGCGAATTAAATGCCGGGCAGATTGTTGAATTTGATTTTGGTGATATCGGCGCATCGTTATTTAGTGCGGCAGGGCCGGGTAATCGACCTGCTGGTGTCATGCCGCAAACCAAGAGCATTGCGGTCAAATGTACGAATGTTGCTGCGCAGGCTTATTTAACAATGCGTCTGGAAGCCAGTGCCGTTTCTGGTCAGGCGATGGTGTCGGACAATCAGGATTTAGGTTTTATTGTCGCCGATCAGAACGATACGCCGATCACGCCTAACGATCTCAATAGCGTTATTCCTTTCCGTCTGGATGCAGCTGCGGCAGCCAATGTCACACTTCGCGCCTGGCCTATCAGTATTACCGGTCAAAAACCGACCGAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGA", - 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"gene_synonym", - "sfmF" - ], - [ - "gene_synonym", - "b0534" - ], - [ - "gene_synonym", - "fimF" - ], - [ - "gene_synonym", - "GeneID:944977" - ], - [ - "gene_synonym", - "ASAP:ABE-0001834" - ], - [ - "gene_synonym", - "JW5072" - ] - ], - "dna_sequence": "ATGAGAAGAGTACTCTTTAGCTGTTTCTGCGGGCTACTGTGGAGTTCCAGTGGATGGGCAGTTGACCCTTTAGGAACGATTAATATCAATTTGCACGGTAACGTTGTTGATTTCTCCTGTACCGTAAACACAGCGGATATTGATAAGACGGTAGATTTAGGCAGATGGCCTACGACACAACTACTGAACGCTGGCGATACCACGGCACTCGTCCCTTTTAGCCTGCGGCTGGAGGGATGTCCTCCGGGTTCAGTTGCGATTTTATTTACGGGAACGCCGGCATCCGATACCAACCTGCTGGCTCTGGATGATCCCGCAATGGCACAAACCGTCGCCATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGAAGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCGGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATCAATTATAATTAA", - "dna_sequence_length": 516, - "functions": [ - "FimA homolog, function unknown" - ], - "id": "CDS_525", - "location": [ - [ - "NC_000913", - 563330, - "+", - 516 - ] - ], - "md5": "abdc5eeb1716c3843af97221b8533f16", - 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"ASAP:ABE-0285029" - ], - [ - "gene_synonym", - "b4508" - ], - [ - "gene_synonym", - "GeneID:945299" - ], - [ - "gene_synonym", - "peaD" - ], - [ - "gene_synonym", - "JW0527" - ], - [ - "gene_synonym", - "EcoGene:EG12350" - ] - ], - "dna_sequence": "TACGAGTATTGCCGGAAGCGTGGCCTGTATCCGGATGCAGAGTCTTATCCGTGGAAATCGAACGCGCATTACTGGTTGGTTACCAACTTGTACCAGAACATGCGGGCCAATGCGCTGGCTGACGCGGAATTACGGCGCAAGGCTGCCGATGAACTGACCTGTATGACAGCGCGAATTAACCGTGGTGAGACGATACCTGAACCAGTAAAACAACTTCCTGTTATGGGCGGTAGACCTCTAAATCGTGCACAGGCTCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTCGGACTGAAAGGAGCAAGTGTATGA", - "dna_sequence_length": 312, - "id": "CDS_530", - "location": [ - [ - "NC_000913", - 566376, - "+", - 312 - ] - ], - "md5": "ce9fe51783dc61d57b0b234e6ba540f2", - "parent_gene": "", - "protein_md5": "f56b879b9cc47f417f8a76d6597abed5", - "protein_translation": "YEYCRKRGLYPDAESYPWKSNAHYWLVTNLYQNMRANALADAELRRKAADELTCMTARINRGETIPEPVKQLPVMGGRPLNRAQALAKIAEIKAKFGLKGASV", - "protein_translation_length": 103, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12351" - ], - [ - "gene_synonym", - "b0542" - ], - [ - "gene_synonym", - "renD" - ], - [ - "gene_synonym", - "ybcE" - ], - [ - "gene_synonym", - "ECK0533" - ], - [ - "gene_synonym", - "ASAP:ABE-0001860" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75718" - ], - [ - "gene_synonym", - "JW0530" - ], - [ - "gene_synonym", - "GeneID:945024" - ] - ], - "dna_sequence": "ATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAAGAGCTTCTGTGCACAGGACGTTGCCGCGGTAACAGGCGCAACCGTAATCACCAGCATAAATCAGGCTGCGGCTAAAATGGCGCGGGCAGGAATCCTGGTCGTTGATGGTAAGGTCTGGCGAACGGTGTATTACCGGTTCGCTACCAGAGAAGAATGGGAAGGAAAGGTGAGCACGAATCTGATTTTTAAGGAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGAGGGTATATAAAAGAACATCAATGGGAACACAATGA", - "dna_sequence_length": 306, - "id": "CDS_531", - "location": [ - [ - "NC_000913", - 566684, - "+", - 93 - ], - [ - "NC_000913", - 568035, - "+", - 213 - ] - ], - "md5": "7cb36fc550ef2746f3cdd721bb4ff3c0", - "parent_gene": "", - "protein_md5": 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"UniProtKB/Swiss-Prot:P77698" - ], - [ - "gene_synonym", - "ybcK" - ], - [ - "gene_synonym", - "ECK0535" - ], - [ - "gene_synonym", - "EcoGene:EG13627" - ], - [ - "gene_synonym", - "ASAP:ABE-0001866" - ], - [ - "gene_synonym", - "JW0532" - ], - [ - "gene_synonym", - "NP_415076.1" - ], - [ - "gene_synonym", - "GI:16128527" - ], - [ - "gene_synonym", - "GeneID:945166" - ] - ], - "dna_sequence": "ATGAAAAAAGCCATAGCATATATGCGATTTTCATCACCAGGTCAGATGTCTGGCGACTCATTAAACCGACAGAGAAGACTTATTGCTGAATGGTTAAAGGTAAATAGTGATTATTATCTTGATACCATAACATATGAAGATTTAGGATTAAGTGCATTCAAAGGAAAGCATGCACAATCAGGAGCTTTTTCGGAATTTTTAGATGCTATAGAGCATGGTTATATATTGCCAGGAACTACATTGTTAGTTGAAAGTCTGGACAGACTTTCAAGAGAAAAAGTCGGTGAAGCGATTGAACGTCTGAAATTGATTTTGAATCACGGTATTGATGTTATAACTCTTTGCGACAATACAGTCTATAATATTGACTCTTTGAATGAGCCATATTCATTAATAAAAGCCATACTTATAGCACAAAGGGCAAATGAAGAAAGCGAGATAAAGTCAAGTCGGGTTAAATTATCATGGAAGAAAAAACGGCAGGATGCACTGGAATCAGGTACGATTATGACGGCGTCTTGTCCGAGATGGCTCTCCTTAGATGACAAAAGAACGGCTTTTGTTCCAGACCCCGACAGGGTGAAAACTATTGAGCTAATTTTTAAACTCAGGATGGAAAGGCGCTCATTGAATGCAATAGCCAAGTATTTAAATGATCATGCTGTAAAGAATTTCTCAGGAAAAGAAAGTGCATGGGGACCTTCTGTAATTGAAAAATTATTAGCGAATAAAGCTCTGATAGGTATTTGCGTACCTTCATATCGTGCAAGAGGGAAAGGGATAAGTGAAATCGCTGGCTATTATCCCAGAGTCATATCAGATGATTTGTTTTACGCTGTACAGGAAATTCGGTTGGCACCTTTTGGTATTAGCAATAGTAGCAAGAATCCTATGCTAATAAATCTACTTCGAACAGTTATGAAGTGTGAGGCTTGTGGTAATACCATGATTGTTCATGCGGTATCTGGAAGTTTGCATGGCTATTATGTTTGTCCGATGAGAAGATTACATCGATGTGACAGGCCATCAATAAAAAGAGATTTGGTTGATTATAATATCATTAATGAATTGCTTTTTAATTGTAGCAAAATTCAACCAGTTGAAAACAAGAAAGATGCTAATGAAACTTTAGAGTTAAAAATTATTGAGCTTCAGATGAAAATTAATAATTTAATCGTTGCATTGTCTGTCGCGCCTGAAGTTACCGCTATAGCAGAGAAAATAAGACTATTAGATAAGGAATTACGAAGGGCTTCGGTATCATTGAAAACTTTGAAGAGTAAAGGTGTAAATTCATTCAGTGATTTTTATGCTATTGACTTAACCAGTAAAAATGGACGAGAGTTATGCCGTACACTTGCCTATAAAACATTCGAAAAAATCATAATTAATACGGATAATAAAACCTGTGATATCTATTTTATGAATGGCATTGTTTTTAAACACTATCCTTTAATGAAAGTAATATCCGCCCAGCAGGCGATAAGTGCTCTCAAATATATGGTTGATGGTGAGATTTATTTCTAA", 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"UniProtKB/Swiss-Prot:P77368" - ], - [ - "gene_synonym", - "b0545" - ], - [ - "gene_synonym", - "EcoGene:EG13628" - ], - [ - "gene_synonym", - "ECK0536" - ], - [ - "gene_synonym", - "ASAP:ABE-0001869" - ], - [ - "gene_synonym", - "GI:16128528" - ], - [ - "gene_synonym", - "JW0533" - ], - [ - "gene_synonym", - "NP_415077.1" - ], - [ - "gene_synonym", - "GeneID:945165" - ] - ], - "dna_sequence": "ATGAAAACACTTATCGTTTCAACTGTATTGGCATTCATAACATTTTCTGCGCAGGCTGCAGCATTTCAGGTCACTAGTAATGAAATAAAAACAGGAGAGCAACTTACAACGTCTCATGTCTTTTCTGGATTTGGGTGTGAAGGTGGTAATACATCGCCCTCATTAACCTGGTCTGGTGTTCCTGAAGGTACCAAAAGCTTTGCCGTAACTGTATATGATCCAGATGCACCTACAGGCAGTGGTTGGTGGCATTGGACTGTTGTTAATATTCCAGCAACAGTAACATATTTGCCCGTTGATGCAGGGAGACGTGATGGAACAAAACTGCCGACTGGTGCTGTTCAAGGCCGAAATGATTTTGGCTATGCTGGGTTTGGTGGCGCATGTCCTCCTAAAGGAGATAAACCACATCATTACCAGTTTAAAGTATGGGCTCTAAAAACTGAAAAGATTCCTGTAGATTCTAACTCCAGCGGAGCGTTAGTTGGTTATATGCTTAATGCTAATAAAATCGCAACCGCTGAGATAACACCAGTTTATGAGATAAAGTAG", - "dna_sequence_length": 552, - "functions": [ 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"ASAP:ABE-0001871" - ], - [ - "gene_synonym", - "JW0534" - ] - ], - "dna_sequence": "ATGCTGGCAAGAGGTAAGACTAACTTAAAGATCGAAGAAATACGGATGCATAAACATCATGAGATTCATAGGGTTAAGCCTCTTATGCCAGCTTTGTGTCGTATCCGTCAGGGAAAGAAAGTTATCAATTGGGAGACGCATACTTTAACTGTTGATAATAATCAAATAATATTATTTCCTTGTGGTTATGAATTTTATATTGAGAATTATCCTGAAGCAGGGCTTTATCTTGCAGAAATGCTTTACTTACCCATTGATTTAATTGAGAGTTTCCAAAAACTTTATACGGTAACTGATCAAATACGTAACAAAACAAGTTTCTTTTTACCTCAGAATCCTGAGTTAATATATTGTTGGGAGCAACTAAAAACATCTGTTTCCCGAGGCTTCTCAACTAAAATTCAGGAGCACTTAGCAATGGGCGTTCTACTTTCGTTAGGAGTGAATCATGTTAATCATTTACTTTTATCATATAGTAAACAATCATTGATAAGTCGTTGTTATAACCTGCTGCTATCCGAACCCGGCACAAAATGGACAGCAAACAAGGTTGCTCGATATCTCTACATTTCTGTTTCTACATTACATCGCCGTCTAGCAAGCGAGGGGGTAAGTTTCCAAAGTATACTGGACGATGTGAGGTTAAATAATGCGTTGTCTGCTATACAAACGACGGTAAAACCTATAAGCGAGATTGCCAGAGAAAATGGTTATAAGTGTCCTTCTCGTTTTACTGAAAGATTTCATAATCGTTTTAATATAACACCAAGAGAGATAAGAAAAGCTTCCAGAGAGTAA", - "dna_sequence_length": 798, - "functions": [ - "DLP12 prophage", - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_537", - "location": [ - [ - "NC_000913", - 571454, - "+", - 798 - ] - ], - "md5": "ea14968d08dcff0934ae6212f05e0a94", - "parent_gene": "", - "protein_md5": "91be061971f54c79b3849275a50f0bff", - "protein_translation": "MLARGKTNLKIEEIRMHKHHEIHRVKPLMPALCRIRQGKKVINWETHTLTVDNNQIILFPCGYEFYIENYPEAGLYLAEMLYLPIDLIESFQKLYTVTDQIRNKTSFFLPQNPELIYCWEQLKTSVSRGFSTKIQEHLAMGVLLSLGVNHVNHLLLSYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIRKASRE", - "protein_translation_length": 265, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47268" - ], - [ - "gene_synonym", - "ECK4398" - ], - [ - "gene_synonym", - "b4588" - ], - [ - "gene_synonym", - "EcoGene:EG14355" - ], - [ - "gene_synonym", - "YP_001165308.1" - ], - [ - "gene_synonym", - "ylcH" - ], - [ - "gene_synonym", - "GeneID:5061504" - ], - [ - "gene_synonym", - "GI:145698228" - ] - ], - "dna_sequence": "ATGCGCACATACAATCCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGA", - "dna_sequence_length": 102, - "functions": [ - "uncharacterized protein, DLP12 prophage" - ], - "id": "CDS_538", - "location": [ - [ - "NC_000913", - 572368, - "+", - 102 - ] - ], - "md5": "0350a6fb03d92bd8809bca624ea021ae", - "parent_gene": "", - "protein_md5": "205a7d3da753f1a7676a415375eafe12", - "protein_translation": "MRTYNPNSLLPSQMQKCTCNSLHLAFDLCGGEA", - "protein_translation_length": 33, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0538" - ], - [ - "gene_synonym", - "b0547" - ], - [ - "gene_synonym", - "ybcN" - ], - [ - "gene_synonym", - "GI:16128530" - ], - [ - "gene_synonym", - "EcoGene:EG13630" - ], - [ - "gene_synonym", - "ASAP:ABE-0001874" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47269" - ], - [ - "gene_synonym", - "NP_415079.1" - ], - [ - "gene_synonym", - "GeneID:945162" - ], - [ - "gene_synonym", - "JW0535" - ] - ], - 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"type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945151" - ], - [ - "gene_synonym", - "ECK0539" - ], - [ - "gene_synonym", - "GI:16128531" - ], - [ - "gene_synonym", - "ASAP:ABE-0001876" - ], - [ - "gene_synonym", - "b0548" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47270" - ], - [ - "gene_synonym", - "ninE" - ], - [ - "gene_synonym", - "NP_415080.1" - ], - [ - "gene_synonym", - "EcoGene:EG14286" - ], - [ - "gene_synonym", - "JW0536" - ] - ], - "dna_sequence": "ATGGCTACACCGCTTATTCGTGTCATGAACGGACACATCTACAGAGTACCAAATCGTCGTAAGCGTAAACCTGAGCTGAAGCCATCCGAAATACCAACACTGCTCGGATATACCGCCAGCTTGGTTGATAAAAAATGGTTGCGACTGGCAGCAAGGAGGAGTCATGGCTGA", - "dna_sequence_length": 171, - "functions": [ - "DLP12 prophage", - "conserved protein" - ], - "id": "CDS_540", - "location": [ - [ - "NC_000913", - 572921, - "+", - 171 - ] - ], - "md5": "670ad2325d0c13b5164fa552eb9b9009", - "parent_gene": "", - "protein_md5": "81ffdfe3b9933e7082e5c1cc59076266", - "protein_translation": "MATPLIRVMNGHIYRVPNRRKRKPELKPSEIPTLLGYTASLVDKKWLRLAARRSHG", - "protein_translation_length": 56, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0540" - ], - [ - "gene_synonym", - "ybcO" - ], - [ - "gene_synonym", - "GeneID:945147" - ], - [ - "gene_synonym", - "ASAP:ABE-0001878" - ], - [ - "gene_synonym", - "GI:16128532" - ], - [ - "gene_synonym", - "NP_415081.1" - ], - [ - "gene_synonym", - "b0549" - ], - [ - "gene_synonym", - "EcoGene:EG13631" - ], - [ - "gene_synonym", - "JW0537" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68661" - ] - ], - "dna_sequence": "ATGGCTGATTTGAGAAAAGCAGCGCGTGGTCGGGAATGCCAGGTAAGAATCCCTGGCGTATGTAATGGCAACCCTGAAACGTCTGTACTGGCACATATCCGGCTGACTGGATTGTGCGGCACCGGTACGAAACCGCCAGACCTGATTGCCACCATTGCATGTTCTGCCTGCCACGACGAAATCGACCGCCGCACGCATTTTGTTGACGCTGGATATGCAAAAGAATGCGCGCTGGAAGGTATGGCGAGAACACAGGTTATCTGGCTGAAAGAGGGGGTTATTAAGGCGTGA", - "dna_sequence_length": 291, - "functions": [ - "DLP12 prophage", - "uncharacterized protein" - ], - "id": "CDS_541", - "location": [ - [ - "NC_000913", - 573084, - "+", - 291 - ] - ], - "md5": "324cef30433b6c660f7974f944d7c5be", - "parent_gene": "", - "protein_md5": "379ba4668752b97af4a7612d6265d3ef", - "protein_translation": "MADLRKAARGRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTKPPDLIATIACSACHDEIDRRTHFVDAGYAKECALEGMARTQVIWLKEGVIKA", - "protein_translation_length": 96, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0541" - ], - [ - "gene_synonym", - "EcoGene:EG20283" - ], - [ - "gene_synonym", - "GeneID:945174" - ], - [ - "gene_synonym", - "b0550" - ], - [ - "gene_synonym", - "GI:16128533" - ], - [ - "gene_synonym", - "rusA" - ], - [ - "gene_synonym", - "JW0538" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG74" - ], - [ - "gene_synonym", - "rus" - ], - [ - "gene_synonym", - "ASAP:ABE-0001880" - ], - [ - "gene_synonym", - "ybcP" - ], - [ - "gene_synonym", - "NP_415082.1" - ] - ], - "dna_sequence": "GTGAATACCTACAGCATCACATTACCCTGGCCTCCGAGCAATAATCGCTATTACCGCCATAATCGCGGGCGCACGCACGTCAGCGCAGAGGGGCAGGCATACCGCGATAACGTCGCCCGAATCATTAAAAACGCAATGCTGGATATCGGCCTGGCTATGCCTGTGAAAATCCGCATTGAGTGCCACATGCCGGATCGCCGTCGCCGTGACCTGGATAATCTGCAAAAAGCCGCTTTTGACGCACTCACTAAAGCAGGTTTCTGGCTGGATGATGCTCAGGTCGTTGATTACCGCGTTGTGAAGATGCCTGTTACCAAAGGTGGGAGGCTGGAACTGACCATCACCGAAATGGGGAATGAATGA", - "dna_sequence_length": 363, - "functions": [ - "DLP12 prophage", - "endonuclease RUS" - ], - "id": "CDS_542", - "location": [ - [ - "NC_000913", - 573371, - "+", - 363 - ] - ], - "md5": "761bf0e8ab607fdd6ef09e8d7552f1ca", - "parent_gene": "", - "protein_md5": "42218bcb360161f6d7866765d1043029", - "protein_translation": "MNTYSITLPWPPSNNRYYRHNRGRTHVSAEGQAYRDNVARIIKNAMLDIGLAMPVKIRIECHMPDRRRRDLDNLQKAAFDALTKAGFWLDDAQVVDYRVVKMPVTKGGRLELTITEMGNE", - "protein_translation_length": 120, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ylcG" - ], - [ - "gene_synonym", - "ECK0542" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47272" - ], - [ - "gene_synonym", - "GI:94541097" - ], - [ - "gene_synonym", - "EcoGene:EG14354" - ], - [ - "gene_synonym", - "YP_588439.1" - ], - [ - "gene_synonym", - "GeneID:1450240" - ], - [ - "gene_synonym", - "b4509" - ], - [ - "gene_synonym", - "ASAP:ABE-0285030" - ], - [ - "gene_synonym", - "JW5076" - ] - ], - "dna_sequence": "ATGATGTTTGAGTTTAATATGGCAGAACTTCTTCGCCACCGCTGGGGGCGTCTGCGCTTATATCGTTTCCCCGGTTCTGTTTTGACCGATTACCGAATACTGAAGAATTACGCCAAAACCCTGACAGGAGCAGGAGTATGA", - "dna_sequence_length": 141, - "functions": [ - "uncharacterized protein, DLP12 prophage" - ], - "id": "CDS_543", - "location": [ - [ - "NC_000913", - 573730, - "+", - 141 - ] - ], - "md5": "fccaa2ca45f2d9112cd831e10c6dab2c", - "parent_gene": "", - "protein_md5": "e474d6a4056ba8e81b16a89fca954676", - "protein_translation": "MMFEFNMAELLRHRWGRLRLYRFPGSVLTDYRILKNYAKTLTGAGV", - "protein_translation_length": 46, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128534" - ], - [ - "gene_synonym", - "ECK0543" - ], - [ - "gene_synonym", - "b0551" - ], - [ - "gene_synonym", - "EcoGene:EG13633" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47274" - ], - [ - "gene_synonym", - "GeneID:945177" - ], - [ - "gene_synonym", - "JW0539" - ], - [ - "gene_synonym", - "quuD" - ], - [ - "gene_synonym", - "NP_415083.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001883" - ], - [ - "gene_synonym", - "ybcQ" - ] - ], - "dna_sequence": "ATGCGTGATATTCAGATGGTTCTTGAGCGTTGGGGAGCGTGGGCGGCTAATAATCATGAAGATGTGACCTGGTCGTCCATTGCCGCCGGTTTTAAGGGATTAATTACTTCAAAAGTAAAATCTCGCCCGCAATGTTGTGACGATGACGCGATGATCATTTGCGGGTGCATGGCCCGTCTGAAAAAGAACAACAGCGATTTGCACGATTTATTAGTAGATTATTATGTAGTCGGTATGACATTCATGTCACTGGCAGGTAAGCATTGCTGCTCTGATGGTTATATCGGGAAAAGGTTACAGAAGGCTGAGGGCATAATTGAAGGGATGTTAATGGCATTAGATATCCGGTTAGAGATGGATATCGTTGTTAATAACTCTAATTAA", - "dna_sequence_length": 384, - "functions": [ - "DLP12 prophage", - "putative antitermination protein" - ], - "id": "CDS_544", - "location": [ - [ - "NC_000913", - 573956, - "+", - 384 - ] - ], - "md5": "27d666a5964ca6f81ba43f81c1a0d722", - "parent_gene": "", - "protein_md5": "ea6effe23b82c9a670bc4d4a01174cd1", - "protein_translation": "MRDIQMVLERWGAWAANNHEDVTWSSIAAGFKGLITSKVKSRPQCCDDDAMIICGCMARLKKNNSDLHDLLVDYYVVGMTFMSLAGKHCCSDGYIGKRLQKAEGIIEGMLMALDIRLEMDIVVNNSN", - "protein_translation_length": 127, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0544" - ], - [ - "gene_synonym", - "b0553" - ], - [ - "gene_synonym", - "nmpC" - ], - [ - "gene_synonym", - "phmA" - ], - [ - "gene_synonym", - "EcoGene:EG10659" - ], - [ - "gene_synonym", - "GeneID:946786" - ], - [ - "gene_synonym", - "JW5078" - ], - [ - "gene_synonym", - "ASAP:ABE-0001888" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21420" - ] - ], - "dna_sequence": "ATGAAAAAATTAACAGTGGCAATTTCTGCTGTAGCTGCATCAGTACTAATGGCGATGTCTGCTCAGGCAGCTGAAATTTATAATAAAGACAGTAACAAGCTGGATCTGTACGGGAAAGTTAATGCTAAGCACTACTTCTCCTCTAATGATGCAGATGATGGTGATACTACTTATGCCCGTCTTGGCTTCAAAGGTGAAACCCAAATCAACGATCAACTGACTGGTTTCGGTCAGTGGGAATATGAATTCAAAGGCAACCGCGCTGAATCTCAAGGTTCCTCCAAAGATAAAACCCGTCTTGCCTTCGCTGGCCTGAAATTCGGTGACTACGGCTCCATCGATTACGGCCGTAACTACGGTGTAGCATACGACATCGGTGCGTGGACTGACGTCCTGCCAGAATTCGGTGGTGACACTTGGACTCAAACCGACGTGTTCATGACTCAACGTGCAACTGGTGTTGCAACCTATCGTAACAACGACTTCTTTGGTCTGGTTGATGGTCTGAACTTTGCTGCTCAGTACCAAGGCAAAAACGATCGTAGCGATTTCGATAACTACACTGAAGGTAACGGTGATGGCTTCGGTTTCTCTGCTACCTATGAATACGAAGGATTCGGTATCGGTGCAACTTATGCGAAATCTGATCGTACCGACACTCAAGTTAATGCAGGGAAAGTTCTTCCTGAAGTATTTGCTTCCGGTAAAAATGCAGAAGTTTGGGCCGCAGGTCTGAAATATGACGCTAACAACATTTACCTGGCCACTACCTATTCTGAAACCCAGAATATGACTGTATTTGCTGATCACTTCGTTGCTAATAAAGCCCAAAACTTCGAAGCTGTTGCACAATATCAGTTCGATTTCGGTCTGCGTCCGTCCGTTGCTTACCTGCAATCTAAAGGTAAGGATCTTGGAGTATGGGGCGATCAGGACTTAGTCAAATATGTTGATGTAGGTGCAACCTATTACTTCAACAAAAATATGTCTACTTTCGTTGATTACAAAATCAACCTGCTTGACAAAAATGACTTCACTAAAGCACTCGGTGTAAGCACTGATGACATCGTTGCTGTAGGTCTGGTTTACCAGTTCTAA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P0A9R2" - ], - [ - "gene_synonym", - "essD" - ], - [ - "gene_synonym", - "ASAP:ABE-0001895" - ], - [ - "gene_synonym", - "GeneID:947545" - ], - [ - "gene_synonym", - "ybcR" - ] - ], - "dna_sequence": "ATGAAATCCATGGATAAGTTAACAACGGGTGTCGCCTATGGCACCTCAGCAGGTAGTGCCGGGTACTGGTTTTTACAGCTGCTAGATAAAGTCACTCCCTCACAGTGGGCAGCAATAGGTGTGCTGGGTAGCCTGGTATTTGGCCTGCTGACGTACCTGACAAACCTTTATTTCAAGATTAAAGAAGATAAGCGCAAGGCTGCGAGAGGTGAATAA", - "dna_sequence_length": 216, - "functions": [ - "DLP12 prophage", - "putative phage lysis protein" - ], - "id": "CDS_547", - "location": [ - [ - "NC_000913", - 577398, - "+", - 216 - ] - ], - "md5": "0efeb583b6aa243f942f67a72bd6a294", - "parent_gene": "", - "protein_md5": "749ab00c4909f333cf0f172c92eac7e0", - "protein_translation": "MKSMDKLTTGVAYGTSAGSAGYWFLQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDKRKAARGE", - "protein_translation_length": 71, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0555" - ], - [ - "gene_synonym", - "arrD" - ], - [ - "gene_synonym", - "NP_415087.1" - ], - [ - "gene_synonym", - "ECK0546" - ], - [ - "gene_synonym", - "JW0544" - ], - [ - "gene_synonym", - "EcoGene:EG13635" - ], - [ - "gene_synonym", - "GI:16128538" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P78285" - ], - [ - "gene_synonym", - "ASAP:ABE-0001898" - ], - [ - "gene_synonym", - "GeneID:947539" - ], - [ - "gene_synonym", - "rrrD" - ], - [ - "gene_synonym", - "ybcS" - ] - ], - "dna_sequence": "ATGCCTCCATCATTACGAAAAGCCGTTGCTGCTGCTATTGGTGGCGGAGCAATTGCTATAGCATCAGTGTTAATCACTGGCCCAAGTGGTAACGATGGTCTGGAAGGTGTCAGCTACATACCATACAAAGATATTGTTGGTGTATGGACTGTATGTCACGGACACACCGGAAAAGACATCATGCTCGGTAAAACGTATACCAAAGCAGAATGCAAAGCACTCTTGAATAAAGACCTTGCCACTGTCGCCAGACAAATTAACCCGTATATCAAAGTCGATATACCGGAAACAACGCGCGGCGCTCTTTACTCATTCGTTTACAACGTGGGTGCTGGCAATTTTAGAACATCGACGCTTCTTCGCAAAATAAACCAGGGCGATATCAAAGGCGCATGTGATCAGCTGCGTCGCTGGACATACGCTGGCGGTAAGCAATGGAAAGGCCTGATGACTCGTCGTGAGATTGAGCGTGAAGTCTGTTTGTGGGGGCAACAGTGA", - 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"MSRVTAIISALIICIIVSLSWAVNHYRDNAIAYKVQRDKNARELKLANAAITDMQMRQRDVAALDAKYTKELADAKAENDALRDDVAAGRRRLHIKAVCQSVREATTASGVDNAASPRLADTAERDYFTLRERLITMQKQLEGTQKYINEQCR", - "protein_translation_length": 153, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rzoD" - ], - [ - "gene_synonym", - "GI:94541098" - ], - [ - "gene_synonym", - "GeneID:1450242" - ], - [ - "gene_synonym", - "ECK0548" - ], - [ - "gene_synonym", - "EcoGene:EG14380" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P58041" - ], - [ - "gene_synonym", - "JW5080" - ], - [ - "gene_synonym", - "Rz1" - ], - [ - "gene_synonym", - "ASAP:ABE-0285031" - ], - [ - "gene_synonym", - "YP_588440.1" - ], - [ - "gene_synonym", - "b4510" - ] - ], - "dna_sequence": "ATGCGAAAGCTGAAAATGATGCTCTGCGTGATGATGTTGCCGCTGGTCGTCGTCGGTTGCACATCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACGGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCAGAGAGAGGCTGA", - "dna_sequence_length": 183, - "functions": [ - "DLP12 prophage", - "putative 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"ATGAAAAAAATGCTACTCGCTACTGCGCTGGCCCTGCTTATTACAGGATGTGCTCAACAGACATTTACTGTTCAAAACAAACAGACAGCAGTAGCACCAAAGGAAACCATCACCCATCATTTCTTCGTTTCTGGAATTGGGCAGAAGAAAACTGTCGATGCAGCTAAAATTTGTGGCGGCGCAGAAAATGTTGTTAAAACAGAAACCCAGCAAACATTCGTAAATGGATTGCTCGGTTTTATTACTTTAGGCATTTATACTCCGCTGGAAGCGCGTGTGTATTGCTCAAAATAA", - "dna_sequence_length": 294, - "functions": [ - "DLP12 prophage", - "putative lipoprotein" - ], - "id": "CDS_551", - "location": [ - [ - "NC_000913", - 578893, - "-", - 294 - ] - ], - "md5": "90c11681ad87500544c43430bfb51835", - "parent_gene": "", - "protein_md5": "cfa64b33fc7cc3fa7ebc37b118fa2130", - "protein_translation": "MKKMLLATALALLITGCAQQTFTVQNKQTAVAPKETITHHFFVSGIGQKKTVDAAKICGGAENVVKTETQQTFVNGLLGFITLGIYTPLEARVYCSK", - "protein_translation_length": 97, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111149" - ], - [ - "gene_synonym", - "ASAP:ABE-0001907" - ], - [ - "gene_synonym", - "EcoGene:EG13638" - ], - [ - "gene_synonym", - "b0558" - ], - [ - "gene_synonym", - "ECK0550" - ], - [ - "gene_synonym", - "JW5081" - ], - [ - "gene_synonym", - "GeneID:945178" - ], - [ - "gene_synonym", - "ybcV" - ], - [ - "gene_synonym", - "NP_415090.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77598" - ] - ], - "dna_sequence": "ATGGCTCAGGTTGCCATTTTTAAAGAAATATTCGATCAAGTGCGAAAAGATTTAAACTGTGAATTGTTTTATTCTGAACTAAAACGTCACAATGTCTCACATTATATTTACTATCTAGCCACAGATAATATTCACATTGTGTTAGAAAACGATAACACCGTGTTAATAAAAGGACTTAAAAAGGTTGTAAATGTTAAATTCTCAAGAAATACGCATCTTATAGAAACGTCCTATGATAGGTTGAAATCAAGAGAAATCACATTTCAGCAATACAGGGAAAATCTTGCTAAAGCAGGAGTTTTCCGATGGATTACAAATATCCACGAACATAAAAGATATTACTATACCTTTGATAATTCATTACTATTTACTGAGAGCATTCAGAACACTACACAAATCTTTCCACGCTAA", - "dna_sequence_length": 411, - "functions": [ - "DLP12 prophage", - "uncharacterized protein" - ], - "id": "CDS_552", - "location": [ - [ - "NC_000913", - 579594, - "-", - 411 - ] - ], - "md5": "a1506570625baf55a5942dc5083f1fcb", - "parent_gene": "", - "protein_md5": "1a90d7a38f6da8566f7f9bf9520819ed", - "protein_translation": "MAQVAIFKEIFDQVRKDLNCELFYSELKRHNVSHYIYYLATDNIHIVLENDNTVLIKGLKKVVNVKFSRNTHLIETSYDRLKSREITFQQYRENLAKAGVFRWITNIHEHKRYYYTFDNSLLFTESIQNTTQIFPR", - "protein_translation_length": 136, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415091.1" - ], - [ - "gene_synonym", - "JW0548" - ], - [ - "gene_synonym", - "EcoGene:EG13639" - ], - [ - "gene_synonym", - "b0559" - ], - [ - "gene_synonym", - "ECK0551" - ], - [ - "gene_synonym", - "ASAP:ABE-0001912" - ], - [ - "gene_synonym", - "GeneID:945175" - ], - [ - "gene_synonym", - "ybcW" - ], - [ - "gene_synonym", - "GI:16128542" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64435" - ] - ], - "dna_sequence": "ATGAATAAAGAACAATCTGCTGATGATCCCTCCGTGGATCTGATTCGTGTAAAAAATATGCTTAATAGCACCATTTCTATGAGTTACCCTGATGTTGTAATTGCATGTATAGAACATAAGGTGTCTCTGGAAGCATTCAGGGCAATTGAGGCAGCGTTGGTGAAGCACGATAATAATATGAAGGATTATTCCCTGGTGGTTGACTGA", - "dna_sequence_length": 207, - "functions": [ - "DLP12 prophage", - "uncharacterized 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"ATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTCATAAAATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTGCGCCGGGAGGTTGAAGAACTGCTGCAGGCCAGCGAGACAGATCTCCAGCCAGGGACTATTGAGTACGAACGCCATCGACTTACGCGTGCGCAGGCCGATGCACAGGAGCTGAAAAATGCCAGAGACTCCGCTGAAGTGGTGGAAACCGCATTCTGTACTTTCGTGCTGTCGCGGATCGCAGGTGAAATTGCCAGTATTCTCGACGGGATCCCCCTGTCGGTGCAGCGGCGTTTTCCGGAACTGGAAAACCGACATGTTGATTTCCTGAAACGGGATATCATCAAAGCCATGAACAAAGCAGCCGCGCTGGATGAACTGATACCGGGGTTGCTGAGTGAATATATCGAACAGTCAGGTTAA", - "dna_sequence_length": 546, - "functions": [ - "DLP12 prophage", - "DNA packaging protein" - ], - "id": "CDS_555", - "location": [ - [ - "NC_000913", - 580834, - "+", - 546 - ] - ], - "md5": "77c0111ac9f4d6eaebb300e11a6caad6", - "parent_gene": "", - "protein_md5": "d93480540713da4a78216d152b99a34e", - "protein_translation": "MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELLQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG", - "protein_translation_length": 181, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ylcF" - ], - [ - "gene_synonym", - "b4634" - ], - [ - "gene_synonym", - "ECK4439" - ], - [ - "gene_synonym", - "aaaD" - ], - [ - "gene_synonym", - "GeneID:5625560" - ], - [ - "gene_synonym", - "EcoGene:EG14346" - ] - ], - "dna_sequence": "GTGAATATATCGAACAGTCAGGTTAACAGGCTGCGGCATTTTGTCCGCGCCGGGCTTCGCTCACTGTTCAGGCCGGAGCCACAGACCGCCGTTGAATGGGCGGATGCTAATTACTATCTCCCGAAAGAATCCGCATACCAGGAAGGGCGCTGGGAAACACTGCCCTTTCAGCGGGCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCCCGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATAGAGCATAAGCAGCGCAACACCCTTATT", - "dna_sequence_length": 309, - "id": "CDS_556", - "location": [ - [ - "NC_000913", - 581354, - "+", - 309 - ] - ], - "md5": "130d58b554e30754358795f328c09c6c", - 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"ATTCCAGCTGGCTTCGTGGCTGTTTTCAACAGTGATGAGTCATCGTGGCATCTCGTTGAAGATCATCGGGGTAAAACGGTTTATGACGTAGCGTCAGGGGACGCGTTATTTATTTCTGAACTCGGTCCGTTACCGGAAAATGTTACCTGGTTATCGCCGGAAGGGGAGTTTCAGAAGTGGAACGGTACAGCCTGGGTGAAAGATGCAGAAGCAGAAAAACTGTTCCGGATTCGGGAGGCGGAAGAAACAAAAAACAGCCTGATGCAGGTAGCCAGTGAGCATATTGCGCCACTTCAGGATGCTGTAGATCTGGAAATCGCAACGGAGGAAGAAACCTCATTGCTGGAAGCCTGGAAAAAATATCGGGTGTTGCTGAACCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAA", - "dna_sequence_length": 438, - "id": "CDS_557", - "location": [ - [ - "NC_000913", - 581660, - "+", - 438 - ] - ], - "md5": "ca806a1aa45c8b7e1c00de2f54acbc8a", - "parent_gene": "", - "protein_md5": "1751149cb5ed16990811d80d338fc5aa", - "protein_translation": "IPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEETSLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE", - "protein_translation_length": 145, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0554" - ], - [ - "gene_synonym", - "JW0551" - ], - [ - "gene_synonym", - "b0562" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77460" - ], - [ - "gene_synonym", - "ybcY" - ], - [ - "gene_synonym", - "EcoGene:EG13641" - ], - [ - "gene_synonym", - "ASAP:ABE-0001919" - ], - [ - "gene_synonym", - "GeneID:945170" - ] - ], - "dna_sequence": "ATAAAAAAAAACACAGATGATGGGGCTAGAATTTACACACCACTTACCCTAAAGCTTTATGACTGGTGGGTTTTGGGAGTATCAAATCGGCTTGCATGGGGATGTCCTACAAAGGAACACCTTCTTCCACACTTTCTGGAACATTTAGGTAACAACCATCTGGATATTGGTGTTGGAACTGGGTTTTACCTTACTCACGTACCTGAGAGTAGTCTGATATCTTTAATGGATTTGAACGAAGCTAGCCTGAACGCGGCATCTACAAGGGCTGGGGAATCAAAAATTAAACATAAAATTAGCCATGATGTTTTTGAACCTTATCCCGCGGCGTTACATGGTCAATTTGATTCCATTTCCATGTCTTACCTTCTTCACTGCCTGCCTGGAAATATATCTACAAAAAGCTGTGTAATACGCAATGCGGCGCAGGCCTTAACTGACGATGGAACTCTATACGGAGCCACAATTCTTGGCGATGGAGTTGTGCACAATAGCTTCGGTCAAAAACTGATGCGCATTTACAATCAGAAAGGCATCTTTTCAAACACAAAAGATTCCGAAGAAGGCTTAACACATATACTCTCAGAGCATTTCGAGAATGTTAAAACCAAGGTTCAAGGTACTGTAGTAATGTTTTCCGCTTCAGGAAAAAAATAG", - "dna_sequence_length": 657, - "id": "CDS_558", - "location": [ - [ - "NC_000913", - 582806, - "-", - 4 - ], - [ - "NC_000913", - 582804, - "-", - 653 - ] - ], - "md5": "210e86af1ff15bf5a6ab5a67b87ee024", - "parent_gene": "", - "protein_md5": "68c9847b02a90aeb4ac91a8c517e84c2", - "protein_translation": "IKKNTDDGARIYTPLTLKLYDWWVLGVSNRLAWGCPTKEHLLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHKISHDVFEPYPAALHGQFDSISMSYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSASGKK", - "protein_translation_length": 218, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ylcE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77087" - ], - [ - "gene_synonym", - "ECK0555" - ], - [ - "gene_synonym", - "ASAP:ABE-0001926" - ], - [ - "gene_synonym", - "JW0552" - ], - [ - "gene_synonym", - "tfaX" - ], - [ - "gene_synonym", - "GeneID:945183" - ], - [ - "gene_synonym", - "b0563" - ], - [ - "gene_synonym", - "EcoGene:EG14317" - ] - ], - "dna_sequence": "ACCACACAGTTCTACATCCAGGAATTCAGTGAGTATATTGCGCCACTGCAGGATGCTGTAGATCTGGAAATCGCAACGGAGGAAGAAAGATCGTTGCTGGAAGCCTGAAAAAAGTATCGGGTGCTGCTAAACCGTGTGGACACTTCCGTAGCACCAGATATCGAGTGGCTTATTCAACCATAA", - "dna_sequence_length": 183, - "id": "CDS_559", - "location": [ - [ - "NC_000913", - 582953, - "+", - 183 - ] - ], - "md5": "99eebb1867b209c39602dcdb99181652", - "parent_gene": "", - "protein_md5": "a0002d8a3d7dc6bb5f6ca085fd31a925", - "protein_translation": "TTQFYIQEFSEYIAPLQDAVDLEIATEEERSLLEA", - "protein_translation_length": 35, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001929" - ], - [ - "gene_synonym", - "GeneID:948797" - ], - [ - "gene_synonym", - "appY" - ], - [ - "gene_synonym", - "EcoGene:EG10050" - ], - [ - "gene_synonym", - "b0564" - ], - [ - "gene_synonym", - "JW0553" - ], - [ - "gene_synonym", - "ECK0556" - ], - [ - "gene_synonym", - "NP_415096.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05052" - ], - [ - "gene_synonym", - "GI:16128547" - ] - ], - "dna_sequence": "ATGGATTATGTTTGCTCCGTAGTTTTCATCTGTCAATCATTTGATTTAATTATAAACAGGAGAGTTATCTCGTTCAAAAAAAATTCATTGTTTATTGTAAGCGACAAAATTAGAAGGGAGTTACCAGTATGCCCCTCTAAACTAAGAATTGTTGATATAGATAAGAAAACATGTTTATCCTTTTTTATCGACGTGAATAATGAGCTGCCTGGCAAATTTACTCTTGATAAGAATGGCTATATTGCTGAAGAGGAACCTCCATTATCGCTTGTTTTTTCTCTGTTTGAAGGGATTAAAATAGCAGACTCACACTCCCTTTGGTTAAAAGAAAGACTATGTATATCCTTACTTGCCATGTTCAAAAAACGCGAAAGTGTAAATTCATTTATACTAACAAATATAAATACATTTACCTGTAAAATTACTGGAATAATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAATTGATTTATACGAGTGAAAGTTTAATAAAAAAAAGATTAAGGGATGAAGGAACGTCATTTACTGAAATATTGAGAGATACTAGGATGAGGTATGCAAAAAAACTCATAACTTCAAACTCTTATTCTATCAATGTCGTAGCCCAGAAATGTGGCTATAACAGTACTTCATATTTCATATGTGCATTTAAAGATTATTATGGTGTCACGCCATCTCATTATTTTGAGAAAATAATCGGCGTCACAGATGGAATAAACAAAACAATTGACTGA", - "dna_sequence_length": 750, - "functions": [ - "global transcriptional activator", - "DLP12 prophage" - ], - "id": "CDS_560", - "location": [ - [ - "NC_000913", - 583681, - "+", - 750 - ] - ], - "md5": "f2cc3a96feaf28fa28dde93ac8dad0ad", - "parent_gene": "", - "protein_md5": "49ec9875d4a0ff98a7001277fa34c6df", - "protein_translation": "MDYVCSVVFICQSFDLIINRRVISFKKNSLFIVSDKIRRELPVCPSKLRIVDIDKKTCLSFFIDVNNELPGKFTLDKNGYIAEEEPPLSLVFSLFEGIKIADSHSLWLKERLCISLLAMFKKRESVNSFILTNINTFTCKITGIISFNIERQWHLKDIAELIYTSESLIKKRLRDEGTSFTEILRDTRMRYAKKLITSNSYSINVVAQKCGYNSTSYFICAFKDYYGVTPSHYFEKIIGVTDGINKTID", - "protein_translation_length": 249, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ompT" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09169" - ], - [ - "gene_synonym", - "EcoGene:EG10673" - ], - [ - "gene_synonym", - "b0565" - ], - [ - "gene_synonym", - "ASAP:ABE-0001931" - ], - [ - "gene_synonym", - "ECK0557" - ], - [ - "gene_synonym", - "NP_415097.1" - ], - [ - "gene_synonym", - "GI:16128548" - ], - [ - "gene_synonym", - "JW0554" - ], - [ - "gene_synonym", - "GeneID:945185" - ] - ], - "dna_sequence": "ATGCGGGCGAAACTTCTGGGAATAGTCCTGACAACCCCTATTGCGATCAGCTCTTTTGCTTCTACCGAGACTTTATCGTTTACTCCTGACAACATAAATGCGGACATTAGTCTTGGAACTCTGAGCGGAAAAACAAAAGAGCGTGTTTATCTAGCCGAAGAAGGAGGCCGAAAAGTCAGTCAACTCGACTGGAAATTCAATAACGCTGCAATTATTAAAGGTGCAATTAATTGGGATTTGATGCCCCAGATATCTATCGGGGCTGCTGGCTGGACAACTCTCGGCAGCCGAGGTGGCAATATGGTCGATCAGGACTGGATGGATTCCAGTAACCCCGGAACCTGGACGGATGAAAGTAGACACCCTGATACACAACTCAATTATGCCAACGAATTTGATCTGAATATCAAAGGCTGGCTCCTCAACGAACCCAATTACCGCCTGGGACTCATGGCCGGATATCAGGAAAGCCGTTATAGCTTTACAGCCAGAGGTGGTTCCTATATCTACAGTTCTGAGGAGGGATTCAGAGATGATATCGGCTCCTTCCCGAATGGAGAAAGAGCAATCGGCTACAAACAACGTTTTAAAATGCCCTACATTGGCTTGACTGGAAGTTATCGTTATGAAGATTTTGAACTCGGTGGCACATTTAAATACAGCGGCTGGGTGGAATCATCTGATAACGATGAACACTATGACCCGGGAAAAAGAATCACTTATCGCAGTAAGGTCAAAGACCAAAATTACTATTCTGTTGCAGTCAATGCAGGTTATTACGTCACACCTAACGCAAAAGTTTATGTTGAAGGCGCATGGAATCGGGTTACGAATAAAAAAGGTAATACTTCACTTTATGATCACAATAATAACACTTCAGACTACAGCAAAAATGGAGCAGGTATAGAAAACTATAACTTCATCACTACTGCTGGTCTTAAGTACACATTTTAA", - "dna_sequence_length": 954, - "functions": [ - "DLP12 prophage", - "outer membrane protease VII", - "outer membrane protein 3b" - ], - "id": "CDS_561", - "location": [ - [ - "NC_000913", - 585633, - "-", - 954 - ] - ], - "md5": "504b514126a585a672b65363e26eceab", - "parent_gene": "", - "protein_md5": "77f9e93fe5de27017f7ed8d046edb071", - "protein_translation": "MRAKLLGIVLTTPIAISSFASTETLSFTPDNINADISLGTLSGKTKERVYLAEEGGRKVSQLDWKFNNAAIIKGAINWDLMPQISIGAAGWTTLGSRGGNMVDQDWMDSSNPGTWTDESRHPDTQLNYANEFDLNIKGWLLNEPNYRLGLMAGYQESRYSFTARGGSYIYSSEEGFRDDIGSFPNGERAIGYKQRFKMPYIGLTGSYRYEDFELGGTFKYSGWVESSDNDEHYDPGKRITYRSKVKDQNYYSVAVNAGYYVTPNAKVYVEGAWNRVTNKKGNTSLYDHNNNTSDYSKNGAGIENYNFITTAGLKYTF", - "protein_translation_length": 317, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10805" - ], - [ - "gene_synonym", - "envY" - ], - [ - "gene_synonym", - "ECK0558" - ], - [ - "gene_synonym", - "JW0555" - ], - [ - "gene_synonym", - "b0566" - ], - [ - "gene_synonym", - "ASAP:ABE-0001935" - ], - [ - "gene_synonym", - "NP_415098.1" - ], - [ - "gene_synonym", - "EcoGene:EG10268" - ], - [ - "gene_synonym", - "GI:16128549" - ], - [ - "gene_synonym", - "GeneID:949114" - ] - ], - "dna_sequence": "ATGCAATTGAGCAGCAGTGAACCTTGCGTGGTGATCCTGACCGAAAAAGAGGTAGAGGTAAGCGTCAATAACCATGCTACGTTTACCCTTCCGAAAAACTACCTGGCCGCCTTCGCGTGCAACAATAACGTCATTGAACTCTCAACGTTAAATCACGTATTAATCACCCACATCAACCGTAACATCATCAACGATTATCTGTTGTTTTTAAATAAGAACTTAACCTGTGTAAAGCCCTGGTCGCGGCTGGCAACCCCGGTTATCGCTTGTCATAGCCGTACACCGGAAGTGTTCCGGCTAGCCGCCAACCACAGCAAGCAGCAACCCAGCAGACCCTGCGAAGCGGAGTTGACGCGCGCATTGCTTTTTACCGTATTGTCTAACTTTCTTGAGCAATCGCGGTTTATTGCCCTACTGATGTATATCTTACGCAGCAGCGTCCGCGACAGCGTCTGCCGCATTATTCAAAGCGATATTCAGCATTACTGGAATCTGCGAATTGTCGCCAGTTCGCTATGTTTAAGCCCCAGCCTGCTCAAAAAGAAATTAAAAAACGAAAATACCAGCTATAGCCAGATTGTCACAGAGTGTCGTATGCGTTACGCCGTACAGATGTTATTGATGGATAACAAAAATATCACTCAGGTGGCGCAATTATGTGGCTATAGCAGCACGTCGTACTTTATCTCTGTTTTTAAGGCGTTTTACGGCCTGACACCGTTGAATTATCTCGCCAAACAGCGACAAAAAGTGATGTGGTGA", - "dna_sequence_length": 762, - "functions": [ - "porin thermoregulatory transcriptional activator" - ], - "id": "CDS_562", - "location": [ - [ - "NC_000913", - 586908, - "-", - 762 - ] - ], - "md5": "7962d1c3352b8648387fb1a292b789e2", - "parent_gene": "", - "protein_md5": "7a9032c7970bb8e17097873f9200f00f", - "protein_translation": "MQLSSSEPCVVILTEKEVEVSVNNHATFTLPKNYLAAFACNNNVIELSTLNHVLITHINRNIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAANHSKQQPSRPCEAELTRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVASSLCLSPSLLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYGLTPLNYLAKQRQKVMW", - "protein_translation_length": 253, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0567" - ], - [ - "gene_synonym", - "ybcH" - ], - [ - "gene_synonym", - "ECK0559" - ], - [ - "gene_synonym", - "JW0556" - ], - [ - "gene_synonym", - "ASAP:ABE-0001937" - ], - [ - "gene_synonym", - "GeneID:945186" - ], - [ - "gene_synonym", - "EcoGene:EG12448" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37325" - ], - [ - "gene_synonym", - "NP_415099.1" - ], - [ - "gene_synonym", - "GI:16128550" - ] - ], - "dna_sequence": "ATGCGTAAGTTCATTTTCGTATTGCTGACACTGCTTTTGGTCAGCCCTTTTTCCTTTGCGATGAAAGGTATTATCTGGCAACCACAAAACCGAGATAGTCAGGTTACCGATACCCAGTGGCAGGGGCTGATGAGTCAGTTACGTTTGCAAGGCTTCGATACCCTTGTTTTGCAATGGACCCGTTACGGCGATGCATTTACCCAGCCAGAACAGCGCACGTTATTGTTTAAGCGGGCCGCAGCTGCGCAACAGGCTGGTCTGAAGCTTATTGTCGGGCTGAACGCCGATCCGGAATTTTTTATGCACCAGAAACAGTCGTCCGCAGCGCTGGAAAGCTATCTTAATCGCCTGCTGGCTGCCGATCTCCAGCAAGCCAGATTATGGAGCGCCGCGCCTGGCATAACGCCGGATGGCTGGTACATCAGCGCGGAAATTGACGACCTGAACTGGCGCAGCGAAGCCGCCCGTCAGCCTTTGCTAACATGGTTAAACAACGCGCAGCGGCTGATTAGCGATGTTTCAGCAAAACCGGTTTATATCAGTAGTTTTTTCGCCGGAAACATGTCGCCCGATGGCTATCGCCAACTGCTGGAACACGTTAAAGCAACCGGCGTTAATGTCTGGGTACAGGATGGCAGCGGCGTGGATAAACTGACCGCTGAACAGCGTGAACGTTATTTACAGGCCAGCGCCGATTGCCAAAGTCCCGCCCCTGCCAGCGGCGTTGTTTATGAACTTTTTGTCGCCGGCAAAGGCAAAACCTTTACAGCGAAACCGAAACCGGACGCAGAAATTGCCTCGCTGTTAGCGAAACGTTCCTCTTGCGGTAAAGACACTCTCTATTTCTCTCTGCGCTATTTGCCCGTCGCGCACGGCATTCTCGAGTATTAA", - "dna_sequence_length": 891, - "functions": [ - "PRK09936 family protein" - ], - "id": "CDS_563", - "location": [ - [ - "NC_000913", - 587981, - "-", - 891 - ] - ], - "md5": "33c61b7e0a3b9a3d4d336a6ce061c8eb", - "parent_gene": "", - "protein_md5": "4f904c2e71c90e728478ed471c1a5322", - "protein_translation": "MRKFIFVLLTLLLVSPFSFAMKGIIWQPQNRDSQVTDTQWQGLMSQLRLQGFDTLVLQWTRYGDAFTQPEQRTLLFKRAAAAQQAGLKLIVGLNADPEFFMHQKQSSAALESYLNRLLAADLQQARLWSAAPGITPDGWYISAEIDDLNWRSEAARQPLLTWLNNAQRLISDVSAKPVYISSFFAGNMSPDGYRQLLEHVKATGVNVWVQDGSGVDKLTAEQRERYLQASADCQSPAPASGVVYELFVAGKGKTFTAKPKPDAEIASLLAKRSSCGKDTLYFSLRYLPVAHGILEY", - "protein_translation_length": 296, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0001939" - ], - [ - "gene_synonym", - "b0568" - ], - [ - "gene_synonym", - "ECK0560" - ], - [ - "gene_synonym", - "JW0557" - ], - [ - "gene_synonym", - "nfrA" - ], - [ - "gene_synonym", - "GeneID:944741" - ], - [ - "gene_synonym", - "EcoGene:EG11740" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31600" - ], - [ - "gene_synonym", - "NP_415100.1" - ], - [ - "gene_synonym", - "GI:16128551" - ] - ], - "dna_sequence": "ATGAAGGAGAATAACCTTAATCGCGTCATCGGATGGTCTGGTTTACTGCTGACGTCTTTATTGAGTACCAGCGCACTCGCAGACAATATCGGCACCAGCGCAGAAGAGCTGGGGCTGAGCGATTATCGCCATTTTGTTATTTATCCCCGTCTCGATAAAGCGCTGAAGGCACAGAAAAATAACGACGAAGCAACCGCCATCCGCGAATTTGAATATATACACCAGCAGGTGCCGGATAATATTCCGCTGACTTTATACCTTGCGGAAGCCTATCGCCATTTTGGTCATGATGACCGGGCGCGGCTGTTGCTTGAGGATCAACTGAAACGTCACCCAGGAGATGCCCGACTTGAGCGCAGTCTGGCGGCTATTCCGGTTGAAGTGAAAAGCGTTACGACAGTTGAAGAACTGCTTGCCCAGCAAAAAGCGTGCGATGCTGCGCCGACCCTGCGTTGTCGCAGTGAAGTCGGGCAGAATGCCCTGCGGCTGGCACAGTTACCTGTCGCCAGAGCGCAACTGAACGATGCGACGTTTGCTGCATCGCCGGAAGGAAAAACGCTGCGAACCGATCTGCTGCAACGGGCAATCTACCTGAAACAATGGTCCCAGGCAGATACGCTATACAATGAAGCACGCCAGCAGAACACATTAAGCGCGGCAGAACGCCGTCAGTGGTTTGACGTGCTTCTTGCCGGGCAGCTGGACGATCGGATCCTGGCACTGCAATCACAGGGGATCTTCACCGATCCTCAGTCATATATTACTTACGCGACCGCGCTGGCTTATCGTGGCGAAAAAGCACGCCTCCAGCATTATCTCATTGAAAATAAGCCACTATTTACCACGGACGCACAAGAGAAAAGTTGGCTCTATCTGTTATCTAAATACAGCGCTAACCCCGTTCAGGCGTTGGCGAATTATACGGTACAGTTTGCCGACAACCGCCAGTATGTTGTTGGCGCGACGCTACCGGTGCTGTTAAAAGAAGGTCAGTACGACGCAGCGCAAAAACTGCTCGCCACCCTCCCCGCCAATGAAATGCTTGAGGAGCGTTATGCTGTCAGCGTGGCGACCCGTAACAAGGCTGAAGCTCTGCGTCTGGCACGATTGCTGTATCAGCAAGAACCGGCAAATCTTACCCGCCTGGATCAACTAACCTGGCAACTGATGCAGAACGAGCAGTCACGCGAAGCTGCCGATTTATTGCTGCAACGCTATCCTTTCCAGGGCGATGCGCGTGTCAGCCAGACTTTAATGGCGCGACTGGCGTCTCTGCTGGAAAGTCATCCTTACCTGGCAACGCCGGCGAAGGTGGCGATTTTATCGAAACCCTTACCGCTGGCGGAGCAACGTCAGTGGCAAAGTCAGTTGCCGGGTATTGCAGATAATTGCCCGGCAATAGTTCGCTTGCTGGGCGATATGTCGCCTTCCTACGATGCCGCCGCCTGGAACCGTCTGGCAAAGTGTTATCGGGACACGCTACCCGGTGTGGCGTTGTATGCATGGCTTCAGGCCGAACAACGACAACCGAGCGCCTGGCAACATCGTGCGGTAGCCTATCAGGCGTATCAGGTTGAGGACTACGCCACCGCACTGGCGGCCTGGCAGAAAATCAGTCTTCACGACATGAGCAATGAGGATCTGCTTGCTGCTGCCAATACCGCCCAGGCGGCAGGAAATGGTGCGGCTCGCGATCGCTGGCTACAACAGGCAGAAAAACGTGGACTGGGAAGCAATGCCCTCTACTGGTGGCTGCATGCGCAACGTTACATTCCTGGTCAGCCGGAACTCGCACTGAACGATCTCACGCGCTCAATCAATATTGCGCCTTCTGCCAACGCTTACGTTGCGCGGGCGACAATTTATCGCCAACGTCATAATGTCCCGGCCGCGGTGAGTGATTTGCGCGCCGCGCTGGAACTGGAACCGAATAATAGCAACACCCAGGCAGCGCTTGGTTACGCCTTGTGGGATAGCGGTGATATCGCACAGTCGCGGGAAATGCTCGAACCGGCGCATAAAGGGCTTCCGGACGATCCGGCACTGATCCGACAACTGGCCTACGTGAACCAGCGTCTGGATGACATGCCTGCGACGCAGCACTACGCCCGGCTGGTGATTGATGACATTGATAATCAGGCGCTGATAACCCCACTGACCCCAGAACAAAATCAACAACGCTTCAATTTCCGCCGTTTGCATGAGGAGGTCGGTCGCCGCTGGACGTTCAGTTTCGATTCTTCCATCGGCTTGCGTTCCGGCGCAATGAGTACCGCTAACAATAATGTCGGCGGCGCAGCGCCAGGGAAAAGCTATCGTAGCTACGGACAACTGGAAGCCGAGTACCGCATCGGACGCAATATGCTGCTGGAAGGCGACCTGCTCTCAGTTTATAGCCGCGTCTTTGCCGATACCGGAGAAAACGGGGTGATGATGCCGGTGAAAAATCCGATGTCCGGCACCGGTCTGCGCTGGAAGCCGCTGCGCGATCAGATCTTTTTCATCGCCGTCGAACAGCAGTTGCCGCTGAACGGCCAAAATGGCGCATCCGATACCATGCTGCGCGCCAGCGCCTCATTCTTTAATGGCGGCAAATACAGCGACGAATGGCACCCGAACGGTTCAGGCTGGTTTGCCCAAAACCTGTACCTCGATGCGGCGCAATATATCCGCCAGGATATTCAGGCGTGGACGGCAGATTATCGCGTCAGCTGGCATCAGAAGGTAGCTAACGGACAGACTATTGAGCCTTACGCTCACGTTCAGGACAACGGCTATCGTGATAAAGGCACTCAGGGCGCGCAGCTTGGCGGAGTCGGGGTCCGCTGGAATATCTGGACCGGCGAGACGCACTACGACGCCTGGCCGCACAAAGTCAGTCTCGGCGTCGAGTATCAACATACCTTTAAGGCGATTAATCAACGTAACGGAGAGCGCAACAACGCGTTTCTCACCATTGGAGTGCACTGGTAA", - "dna_sequence_length": 2973, - "functions": [ - "bacteriophage N4 receptor, outer membrane subunit" - ], - "id": "CDS_564", - "location": [ - [ - "NC_000913", - 590954, - "-", - 2973 - ] - ], - "md5": "03ea32b5f62be4c3521153f0304a90b5", - "parent_gene": "", - "protein_md5": "7b6e71f1de4e505804e324932781966a", - "protein_translation": "MKENNLNRVIGWSGLLLTSLLSTSALADNIGTSAEELGLSDYRHFVIYPRLDKALKAQKNNDEATAIREFEYIHQQVPDNIPLTLYLAEAYRHFGHDDRARLLLEDQLKRHPGDARLERSLAAIPVEVKSVTTVEELLAQQKACDAAPTLRCRSEVGQNALRLAQLPVARAQLNDATFAASPEGKTLRTDLLQRAIYLKQWSQADTLYNEARQQNTLSAAERRQWFDVLLAGQLDDRILALQSQGIFTDPQSYITYATALAYRGEKARLQHYLIENKPLFTTDAQEKSWLYLLSKYSANPVQALANYTVQFADNRQYVVGATLPVLLKEGQYDAAQKLLATLPANEMLEERYAVSVATRNKAEALRLARLLYQQEPANLTRLDQLTWQLMQNEQSREAADLLLQRYPFQGDARVSQTLMARLASLLESHPYLATPAKVAILSKPLPLAEQRQWQSQLPGIADNCPAIVRLLGDMSPSYDAAAWNRLAKCYRDTLPGVALYAWLQAEQRQPSAWQHRAVAYQAYQVEDYATALAAWQKISLHDMSNEDLLAAANTAQAAGNGAARDRWLQQAEKRGLGSNALYWWLHAQRYIPGQPELALNDLTRSINIAPSANAYVARATIYRQRHNVPAAVSDLRAALELEPNNSNTQAALGYALWDSGDIAQSREMLEPAHKGLPDDPALIRQLAYVNQRLDDMPATQHYARLVIDDIDNQALITPLTPEQNQQRFNFRRLHEEVGRRWTFSFDSSIGLRSGAMSTANNNVGGAAPGKSYRSYGQLEAEYRIGRNMLLEGDLLSVYSRVFADTGENGVMMPVKNPMSGTGLRWKPLRDQIFFIAVEQQLPLNGQNGASDTMLRASASFFNGGKYSDEWHPNGSGWFAQNLYLDAAQYIRQDIQAWTADYRVSWHQKVANGQTIEPYAHVQDNGYRDKGTQGAQLGGVGVRWNIWTGETHYDAWPHKVSLGVEYQHTFKAINQRNGERNNAFLTIGVHW", - "protein_translation_length": 990, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945849" - ], - [ - "gene_synonym", - "nfrB" - ], - [ - "gene_synonym", - "b0569" - ], - [ - "gene_synonym", - "ECK0561" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFA5" - ], - [ - "gene_synonym", - "EcoGene:EG11739" - ], - [ - "gene_synonym", - "NP_415101.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0001942" - ], - [ - "gene_synonym", - "GI:16128552" - ], - [ - "gene_synonym", - "JW0558" - ] - ], - "dna_sequence": "GTGGACTGGCTTCTTGATGTTTTTGCTACCTGGCTCTACGGCTTAAAAGTAATCGCGATAACGTTAGCGGTCATCATGTTCATCAGCGGGCTGGACGATTTTTTTATTGATGTCGTCTACTGGGTACGCCGCATTAAACGCAAGTTGAGTGTTTATCGCCGCTACCCGCGAATGAGTTACCGCGAACTGTATAAACCAGATGAAAAACCGTTAGCGATTATGGTTCCGGCGTGGAATGAAACGGGCGTCATCGGCAATATGGCCGAGCTGGCGGCGACCACGCTCGACTACGAAAACTATCATATCTTTGTTGGCACCTACCCCAACGACCCCGATACTCAGCGTGATGTTGACGAAGTGTGCGCTCGCTTCCCGAATGTGCATAAGGTAGTCTGCGCGCGTCCTGGCCCCACCAGCAAAGCCGACTGTCTGAACAACGTGCTGGACGCCATCACCCAATTTGAGCGTAGCGCCAATTTCGCTTTTGCTGGTTTTATTCTGCATGACGCCGAAGATGTGATTTCACCGATGGAATTGCGTCTGTTCAACTATCTGGTCGAGCGTAAAGATCTGATTCAGATCCCGGTGTATCCGTTCGAACGCGAATGGACGCACTTCACCAGCATGACTTACATTGATGAGTTTTCAGAGCTGCATGGCAAAGATGTTCCGGTGCGTGAAGCCCTCGCCGGACAAGTGCCCAGCGCAGGCGTCGGCACCTGTTTCAGCCGCCGCGCCGTGACCGCACTGTTAGCTGACGGTGACGGTATTGCTTTCGACGTGCAGAGTCTTACTGAAGATTACGACATTGGCTTCCGCCTGAAAGAAAAAGGTATGACGGAAATTTTTGTCCGTTTTCCGGTGGTGGACGAAGCCAAAGAACGCGAGCAGCGTAAATTTTTACAGCACGCGCGGACATCAAACATGATCTGCGTGCGCGAATATTTCCCCGATACCTTTTCGACTGCGGTTCGACAAAAATCCCGCTGGATCATCGGCATTGTTTTCCAAGGCTTTAAAACCCATAAATGGACCTCCAGCCTGACGCTGAACTACTTTCTCTGGCGCGACCGCAAAGGGGCAATCAGTAACTTTGTCAGCTTCCTCGCGATGCTGGTGATGATCCAGCTTTTGCTGTTGCTGGCGTATGAAAGTTTGTGGCCCGATGCCTGGCATTTCCTTTCTATTTTCAGCGGCAGCGCATGGTTAATGACCCTGCTGTGGCTAAACTTTGGTTTGATGGTTAACCGCATCGTGCAGCGGGTGATTTTCGTTACTGGCTACTACGGCCTGACGCAGGGGCTGCTTTCCGTCCTGCGTCTTTTCTGGGGCAACCTGATTAACTTCATGGCCAACTGGCGCGCGCTAAAACAGGTACTTCAACACGGCGATCCACGTCGCGTGGCGTGGGATAAAACAACGCATGACTTCCCCAGCGTGACTGGCGATACCCGCTCGTTGCGCCCGTTAGGTCAAATTCTGCTGGAAAATCAGGTCATCACTGAAGAACAACTCGATACAGCACTGCGTAATCGCGTCGAAGGTCTACGCCTGGGCGGTTCAATGCTGATGCAGGGGCTGATTAGCGCCGAGCAGCTGGCACAGGCGCTGGCAGAGCAAAACGGCGTGGCGTGGGAATCCATCGATGCCTGGCAGATCCCTTCCTCGCTGATTGCCGAAATGCCGGCCTCCGTGGCGCTGCATTATGCGGTACTGCCGCTGCGTCTGGAAAATGACGAGTTAATTGTCGGCAGTGAAGATGGTATTGACCCGGTTTCGCTGGCGGCCCTGACGCGTAAAGTCGGACGCAAAGTGCGTTACGTCATTGTTCTGCGGGGACAAATTGTCACAGGGTTACGTCACTGGTATGCACGCCGACGCGGTCACGATCCGCGGGCAATGTTGTACAATGCGGTTCAGCATCAGTGGCTCACGGAACAGCAGGCCGGTGAAATCTGGCGGCAATATGTGCCGCATCAGTTCCTGTTCGCCGAAATACTGACCACGCTCGGTCATATTAATCGTTCAGCAATTAACGTGTTGTTATTGCGCCATGAACGCAGTTCTCTGCCGCTCGGCAAGTTTTTGGTCACCGAAGGCGTTATCAGCCAGGAAACGTTGGATCGCGTCCTGACAATTCAACGCGAATTACAAGTTTCGATGCAATCACTATTACTCAAAGCAGGTTTAAACACAGAACAGGTTGCGCAACTGGAGTCCGAAAATGAAGGAGAATAA", 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"MDWLLDVFATWLYGLKVIAITLAVIMFISGLDDFFIDVVYWVRRIKRKLSVYRRYPRMSYRELYKPDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHIFVGTYPNDPDTQRDVDEVCARFPNVHKVVCARPGPTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELRLFNYLVERKDLIQIPVYPFEREWTHFTSMTYIDEFSELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLADGDGIAFDVQSLTEDYDIGFRLKEKGMTEIFVRFPVVDEAKEREQRKFLQHARTSNMICVREYFPDTFSTAVRQKSRWIIGIVFQGFKTHKWTSSLTLNYFLWRDRKGAISNFVSFLAMLVMIQLLLLLAYESLWPDAWHFLSIFSGSAWLMTLLWLNFGLMVNRIVQRVIFVTGYYGLTQGLLSVLRLFWGNLINFMANWRALKQVLQHGDPRRVAWDKTTHDFPSVTGDTRSLRPLGQILLENQVITEEQLDTALRNRVEGLRLGGSMLMQGLISAEQLAQALAEQNGVAWESIDAWQIPSSLIAEMPASVALHYAVLPLRLENDELIVGSEDGIDPVSLAALTRKVGRKVRYVIVLRGQIVTGLRHWYARRRGHDPRAMLYNAVQHQWLTEQQAGEIWRQYVPHQFLFAEILTTLGHINRSAINVLLLRHERSSLPLGKFLVTEGVISQETLDRVLTIQRELQVSMQSLLLKAGLNTEQVAQLESENEGE", - "protein_translation_length": 745, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cusS" - ], - [ - "gene_synonym", - "b0570" - ], - [ - "gene_synonym", - "ECK0562" - ], - [ - "gene_synonym", - "JW5082" - ], - [ - "gene_synonym", - "ASAP:ABE-0001946" - ], - [ - "gene_synonym", - "GeneID:945978" - ], - [ - "gene_synonym", - "silS" - ], - [ - "gene_synonym", - "EcoGene:EG13642" - ], - [ - "gene_synonym", - "ybcZ" - ], - [ - "gene_synonym", - "NP_415102.1" - ], - [ - "gene_synonym", - "GI:16128553" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77485" - ] - ], - "dna_sequence": "ATGGTCAGTAAGCCATTTCAGCGCCCGTTTTCGCTGGCAACCCGCCTGACCTTTTTTATCAGCCTGGCCACCATCGCGGCGTTTTTCGCCTTTGCATGGATCATGATCCACTCAGTAAAAGTTCATTTTGCCGAGCAGGATATTAATGATTTAAAAGAGATTAGCGCCACCCTTGAACGGGTACTAAATCACCCTGACGAAACGCAAGCCCGACGCTTAATGACGCTGGAAGATATCGTCAGTGGTTATTCCAATGTGTTGATTTCCCTGGCAGATAGTCAGGGTAAAACGGTGTATCACTCCCCCGGTGCGCCGGATATCCGCGAGTTTACGCGTGACGCCATACCCGATAAAGACGCTCAGGGTGGCGAGGTGTATCTCCTTTCCGGCCCGACGATGATGATGCCAGGCCACGGTCACGGGCATATGGAACACAGCAACTGGCGGATGATTAACTTGCCGGTTGGCCCGTTGGTGGACGGCAAACCGATTTATACGCTCTACATCGCGCTTTCGATCGATTTTCATCTTCATTACATAAATGATTTGATGAATAAACTTATTATGACCGCATCGGTAATCAGCATCCTGATCGTCTTTATCGTACTGTTGGCGGTACATAAAGGTCACGCGCCGATCCGCAGCGTCAGCCGTCAAATCCAGAATATTACCTCGAAAGATCTCGACGTTCGCCTCGACCCGCAGACCGTGCCCATTGAGCTGGAACAGCTGGTACTGTCGTTCAACCATATGATCGAGCGTATTGAGGATGTCTTTACCCGCCAGTCCAATTTCTCAGCGGATATCGCTCACGAAATTCGCACACCAATTACGAATCTCATAACGCAAACCGAAATCGCCCTCAGCCAGTCGCGCAGCCAGAAGGAGCTGGAAGATGTGCTCTACTCTAATCTCGAAGAGCTGACGCGAATGGCGAAAATGGTCAGCGATATGCTGTTTCTCGCTCAGGCCGATAACAACCAGCTAATCCCCGAAAAGAAAATGCTCAACCTGGCGGATGAAGTCGGCAAAGTGTTCGATTTTTTCGAGGCGTTAGCGGAAGATCGCGGCGTGGAGTTGCGGTTTGTTGGCGACAAGTGTCAGGTCGCGGGCGATCCGCTGATGCTGCGTCGGGCGCTAAGCAACCTGCTTTCGAACGCCCTGCGTTATACGCCAACCGGAGAGACAATTGTAGTGCGCTGTCAGACGGTCGATCACCTGGTGCAAGTTATCGTCGAAAACCCCGGTACGCCCATTGCGCCCGAGCACTTACCGCGATTGTTTGACCGTTTCTATCGCGTTGACCCCTCCCGCCAGCGAAAAGGTGAAGGTAGCGGTATTGGCCTGGCGATAGTGAAATCGATTGTTGTCGCGCATAAAGGCACGGTTGCGGTAACGTCGGATGCGCGGGGGACAAGGTTTGTTATCACATTACCCGCTTAA", - "dna_sequence_length": 1443, - "functions": [ - "copper-sensing histidine kinase in two-component regulatory system with CusR" - ], - "id": "CDS_566", - "location": [ - [ - "NC_000913", - 594770, - "-", - 1443 - ] - ], - "md5": "35c4d2fc2b95e9bbad517faae804cb7b", - "parent_gene": "", - "protein_md5": "d6e2741a946258d2fcd03118aa6ec827", - "protein_translation": "MVSKPFQRPFSLATRLTFFISLATIAAFFAFAWIMIHSVKVHFAEQDINDLKEISATLERVLNHPDETQARRLMTLEDIVSGYSNVLISLADSQGKTVYHSPGAPDIREFTRDAIPDKDAQGGEVYLLSGPTMMMPGHGHGHMEHSNWRMINLPVGPLVDGKPIYTLYIALSIDFHLHYINDLMNKLIMTASVISILIVFIVLLAVHKGHAPIRSVSRQIQNITSKDLDVRLDPQTVPIELEQLVLSFNHMIERIEDVFTRQSNFSADIAHEIRTPITNLITQTEIALSQSRSQKELEDVLYSNLEELTRMAKMVSDMLFLAQADNNQLIPEKKMLNLADEVGKVFDFFEALAEDRGVELRFVGDKCQVAGDPLMLRRALSNLLSNALRYTPTGETIVVRCQTVDHLVQVIVENPGTPIAPEHLPRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVVAHKGTVAVTSDARGTRFVITLPA", - "protein_translation_length": 480, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0571" - ], - [ - "gene_synonym", - "cusR" - ], - [ - "gene_synonym", - "ECK0563" - ], - [ - "gene_synonym", - "NP_415103.1" - ], - [ - "gene_synonym", - "ylcA" - ], - [ - "gene_synonym", - "JW0560" - ], - [ - "gene_synonym", - "silR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACZ8" - ], - [ - "gene_synonym", - "ASAP:ABE-0001948" - ], - [ - "gene_synonym", - "GeneID:945003" - ], - [ - "gene_synonym", - "GI:16128554" - ], - [ - "gene_synonym", - "EcoGene:EG13851" - ] - ], - "dna_sequence": "ATGAAACTGTTGATTGTCGAAGATGAAAAGAAAACCGGAGAATACTTGACCAAAGGGTTAACCGAAGCCGGTTTTGTGGTCGATTTGGCCGACAACGGGCTGAATGGCTACCATCTGGCGATGACCGGTGATTATGATCTGATAATCCTCGATATTATGCTGCCGGACGTGAACGGCTGGGATATCGTGCGCATGTTACGCTCCGCCAATAAAGGGATGCCGATTCTGTTGCTTACCGCGCTTGGCACCATTGAACATCGCGTCAAGGGGCTGGAGTTGGGGGCAGATGACTACCTGGTGAAGCCATTCGCTTTTGCTGAACTGCTGGCGCGGGTGCGCACATTACTGCGGCGCGGGGCGGCGGTGATTATCGAAAGTCAGTTTCAGGTTGCCGATTTGATGGTCGATCTCGTCAGCCGCAAAGTCACCCGCAGCGGCACGCGCATCACTTTGACCAGTAAAGAGTTTACTCTGCTGGAGTTCTTCCTTCGCCATCAGGGCGAAGTGCTGCCCCGCTCGCTTATCGCCTCGCAGGTATGGGACATGAATTTTGACAGCGATACCAATGCTATTGATGTGGCGGTGAAGCGGCTGCGCGGCAAAATCGACAACGACTTTGAGCCGAAGCTAATTCAGACCGTGCGCGGCGTGGGTTACATGCTTGAGGTGCCGGATGGTCAGTAA", - "dna_sequence_length": 684, - "functions": [ - "response regulator in two-component regulatory system with CusS" - ], - "id": "CDS_567", - "location": [ - [ - "NC_000913", - 595443, - "-", - 684 - ] - ], - "md5": "a219ad3ccf28aedcc6847cf3fa5093db", - "parent_gene": "", - "protein_md5": "4dd31fadffaa9a241f38483c086aa107", - "protein_translation": "MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIILDIMLPDVNGWDIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGAAVIIESQFQVADLMVDLVSRKVTRSGTRITLTSKEFTLLEFFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRGKIDNDFEPKLIQTVRGVGYMLEVPDGQ", - "protein_translation_length": 227, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0572" - ], - [ - "gene_synonym", - "ECK0564" - ], - [ - "gene_synonym", - "ylcB" - ], - [ - "gene_synonym", - "JW0561" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77211" - ], - [ - "gene_synonym", - "ibeB" - ], - [ - "gene_synonym", - "GeneID:946288" - ], - [ - "gene_synonym", - "cusC" - ], - [ - "gene_synonym", - "silC" - ], - [ - "gene_synonym", - "ASAP:ABE-0001958" - ], - [ - "gene_synonym", - "NP_415104.1" - ], - [ - "gene_synonym", - "GI:16128555" - ], - [ - "gene_synonym", - "EcoGene:EG14233" - ] - ], - "dna_sequence": "ATGTCTCCTTGTAAACTTCTGCCATTTTGTGTGGCCCTTGCGCTAACCGGTTGTTCACTGGCACCGGATTATCAGCGTCCGGCAATGCCCGTGCCGCAGCAGTTCTCACTCAGCCAGAACGGCCTGGTTAACGCAGCAGATAACTATCAGAACGCGGGCTGGCGCACCTTTTTTGTTGATAATCAGGTGAAGACGCTGATTAGCGAGGCGCTGGTGAATAATCGGGATTTGCGCATGGCGACGCTGAAAGTGCAGGAGGCACGGGCGCAATATCGTCTGACCGATGCCGACCGCTACCCACAGCTCAATGGCGAGGGCAGCGGCAGCTGGAGCGGTAATCTTAAAGGGAATACCGCCACGACACGGGAGTTTTCGACCGGCCTTAACGCCAGCTTTGACCTCGATTTTTTCGGTCGCTTAAAGAACATGAGCGAAGCCGAGCGACAAAATTATTTAGCCACTGAGGAAGCTCAGCGCGCGGTGCATATTCTGCTGGTTTCTAATGTCGCGCAAAGCTATTTCAATCAGCAACTGGCGTATGCGCAATTGCAAATAGCCGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACAGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGCTGGGAAGCTACGGCAAGCTGCCGCAAGCGCAGACAGTAAACAGCGACAGCCTGCAAAGCGTTAAATTACCGGCGGGATTGTCGTCGCAAATCTTATTGCAGCGCCCGGATATTATGGAAGCTGAACACGCGTTAATGGCGGCTAATGCCAATATTGGCGCTGCACGCGCGGCATTTTTTCCGTCTATAAGCCTGACCAGCGGAATATCGACCGCCAGTAGCGATCTATCGTCATTATTTAACGCCAGCAGCGGGATGTGGAATTTTATACCCAAAATTGAGATCCCCATTTTTAATGCCGGACGCAACCAGGCCAATCTGGATATCGCCGAAATTCGCCAGCAGCAGTCGGTGGTGAATTATGAACAGAAAATCCAGAACGCCTTTAAAGAAGTGGCAGATGCGCTGGCATTACGTCAAAGCCTGAACGATCAAATTAGCGCCCAGCAGCGTTATCTGGCATCGCTGCAAATTACTTTGCAACGGGCGCGGGCATTATATCAGCACGGCGCAGTAAGTTATCTGGAAGTGCTGGATGCCGAGCGTTCTTTATTTGCAACCCGACAAACTTTACTTGATCTGAATTATGCCCGTCAGGTTAACGAAATTTCTTTGTATACCGCACTTGGTGGCGGTTGA", - "dna_sequence_length": 1374, - "functions": [ - "copper/silver efflux system, outer membrane component" - ], - "id": "CDS_568", - "location": [ - [ - "NC_000913", - 595600, - "+", - 1374 - ] - ], - "md5": "f249eaa64206fed14f48e67a2b70de51", - "parent_gene": "", - "protein_md5": "af77b13732daff2b30dc54da57dc0336", - "protein_translation": "MSPCKLLPFCVALALTGCSLAPDYQRPAMPVPQQFSLSQNGLVNAADNYQNAGWRTFFVDNQVKTLISEALVNNRDLRMATLKVQEARAQYRLTDADRYPQLNGEGSGSWSGNLKGNTATTREFSTGLNASFDLDFFGRLKNMSEAERQNYLATEEAQRAVHILLVSNVAQSYFNQQLAYAQLQIAEETLRNYQQSYAFVEKQLLTGSSNVLALEQARGVIESTRSDIAKRQGELAQANNALQLLLGSYGKLPQAQTVNSDSLQSVKLPAGLSSQILLQRPDIMEAEHALMAANANIGAARAAFFPSISLTSGISTASSDLSSLFNASSGMWNFIPKIEIPIFNAGRNQANLDIAEIRQQQSVVNYEQKIQNAFKEVADALALRQSLNDQISAQQRYLASLQITLQRARALYQHGAVSYLEVLDAERSLFATRQTLLDLNYARQVNEISLYTALGGG", - "protein_translation_length": 457, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0573" - ], - [ - "gene_synonym", - "ECK0565" - ], - [ - "gene_synonym", - "ylcC" - ], - [ - "gene_synonym", - "cusX" - ], - [ - "gene_synonym", - "JW0562" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77214" - ], - [ - "gene_synonym", - "NP_415105.1" - ], - [ - "gene_synonym", - "silF" - ], - [ - "gene_synonym", - "cusF" - ], - [ - "gene_synonym", - "GI:16128556" - ], - [ - "gene_synonym", - "EcoGene:EG14234" - ], - [ - "gene_synonym", - "GeneID:945188" - ], - [ - "gene_synonym", - "ASAP:ABE-0001967" - ] - ], - "dna_sequence": "ATGAAAAAAGCACTGCAAGTCGCAATGTTCAGTCTGTTTACCGTTATTGGCTTTAATGCCCAGGCTAACGAACATCATCATGAAACCATGAGCGAAGCACAACCACAGGTTATTAGCGCCACTGGCGTGGTAAAGGGTATCGATCTGGAAAGCAAAAAAATCACCATCCATCACGATCCGATTGCTGCCGTGAACTGGCCGGAGATGACCATGCGCTTTACCATCACCCCGCAGACGAAAATGAGTGAAATTAAAACCGGCGACAAAGTGGCGTTTAATTTTGTCCAGCAGGGCAACCTTTCTTTATTACAGGATATTAAAGTCAGCCAGTAA", - "dna_sequence_length": 333, - "functions": [ - "periplasmic copper- and silver-binding protein" - ], - "id": "CDS_569", - "location": [ - [ - "NC_000913", - 597131, - "+", - 333 - ] - ], - "md5": "2d2686fd5664d1a6d7d8618542903999", - "parent_gene": "", - "protein_md5": "06b26eaeff3381c46dc9050c52ac4cda", - "protein_translation": "MKKALQVAMFSLFTVIGFNAQANEHHHETMSEAQPQVISATGVVKGIDLESKKITIHHDPIAAVNWPEMTMRFTITPQTKMSEIKTGDKVAFNFVQQGNLSLLQDIKVSQ", - "protein_translation_length": 110, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0566" - ], - [ - "gene_synonym", - "ylcD" - ], - [ - "gene_synonym", - "NP_415106.1" - ], - [ - "gene_synonym", - "b0574" - ], - [ - "gene_synonym", - "JW0563" - ], - [ - "gene_synonym", - "silB" - ], - [ - "gene_synonym", - "cusB" - ], - [ - "gene_synonym", - "GI:16128557" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77239" - ], - [ - "gene_synonym", - "EcoGene:EG14235" - ], - [ - "gene_synonym", - "ASAP:ABE-0001969" - ], - [ - "gene_synonym", - "GeneID:945189" - ] - ], - "dna_sequence": "ATGAAAAAAATCGCGCTTATTATCGGCAGCATGATCGCGGGCGGTATTATTTCTGCGGCAGGTTTTACCTGGGTTGCAAAGGCGGAACCGCCTGCAGAAAAAACGTCGACCGCAGAACGTAAAATCTTATTCTGGTACGACCCAATGTATCCCAATACGCGGTTCGATAAACCAGGTAAATCGCCGTTTATGGATATGGATCTGGTGCCGAAATATGCCGATGAAGAGAGTTCTGCGTCTGGTGTGCGCATTGACCCGACTCAGACGCAGAATCTGGGGGTGAAAACGGCTACCGTCACGCGCGGACCGCTGACTTTTGCCCAGAGTTTCCCGGCGAATGTCAGTTACAACGAGTATCAGTATGCCATTGTGCAGGCTCGCGCTGCCGGGTTTATCGACAAGGTGTATCCGCTTACCGTGGGCGATAAAGTACAAAAGGGCACACCGCTTCTCGACCTGACCATTCCTGACTGGGTGGAAGCGCAGAGTGAGTATTTACTGCTGCGCGAAACCGGCGGTACGGCGACCCAGACTGAAGGCATTCTTGAGCGGCTGCGACTGGCGGGAATGCCGGAGGCGGATATTCGCCGCCTGATCGCCACGCAAAAAATCCAGACTCGCTTTACGCTCAAAGCGCCCATTGATGGCGTGATCACCGCGTTTGATCTGCGCGCGGGAATGAATATCGCCAAAGATAACGTGGTAGCGAAAATTCAGGGTATGGACCCGGTGTGGGTCACTGCTGCGATCCCGGAGTCTATCGCCTGGCTGGTGAAAGATGCCTCGCAGTTTACCCTCACCGTTCCGGCGCGACCGGATAAAACACTCACCATCCGCAAATGGACGCTGCTACCTGGCGTGGATGCCGCGACCCGCACGCTGCAGCTGCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAACAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAGCGGCCTGTTCCTGATTGATTCCGAAGCCAATATTTCTGGCGCACTGGAGCGGATGCGCTCTGAAAGTGCTACCCATGCGCATTGA", - "dna_sequence_length": 1224, - "functions": [ - "copper/silver efflux system, membrane fusion protein" - ], - "id": "CDS_570", - "location": [ - [ - "NC_000913", - 597479, - "+", - 1224 - ] - ], - "md5": "36c07f738056d4ec31db8fadeeca84e8", - "parent_gene": "", - "protein_md5": "f26d2821d008f1aeab38380a4876cf5f", - "protein_translation": "MKKIALIIGSMIAGGIISAAGFTWVAKAEPPAEKTSTAERKILFWYDPMYPNTRFDKPGKSPFMDMDLVPKYADEESSASGVRIDPTQTQNLGVKTATVTRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLIATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWLQLNTASEPMLLIPSQALIDTGSEQRVITVDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLIDSEANISGALERMRSESATHAH", - "protein_translation_length": 407, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0567" - ], - [ - "gene_synonym", - "NP_415107.1" - ], - [ - "gene_synonym", - "b0575" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38054" - ], - [ - "gene_synonym", - "JW0564" - ], - [ - "gene_synonym", - "cusA" - ], - [ - "gene_synonym", - "silA" - ], - [ - "gene_synonym", - "EcoGene:EG12367" - ], - [ - "gene_synonym", - "ASAP:ABE-0001971" - ], - [ - "gene_synonym", - "GI:16128558" - ], - [ - "gene_synonym", - "GeneID:945191" - ], - [ - "gene_synonym", - "ybdE" - ] - ], - "dna_sequence": "ATGATTGAATGGATTATTCGTCGCTCGGTGGCGAACCGTTTTTTGGTGCTGATGGGCGCGTTGTTTCTGAGCATCTGGGGCACCTGGACCATCATTAATACGCCAGTGGATGCGCTGCCGGATCTCTCCGATGTGCAGGTTATTATTAAAACCAGCTATCCCGGTCAGGCACCACAAATCGTTGAAAATCAGGTGACTTATCCGCTAACCACCACCATGTTGTCGGTGCCTGGCGCGAAGACTGTGCGCGGTTTCTCACAGTTTGGCGACTCTTATGTGTATGTCATTTTCGAAGATGGCACCGATCCGTACTGGGCGCGTTCGCGGGTGCTGGAGTACCTCAACCAGGTACAGGGTAAGCTGCCTGCGGGAGTCAGCGCCGAGCTGGGGCCAGATGCCACGGGTGTTGGCTGGATCTATGAATATGCACTGGTGGATCGCAGCGGTAAGCACGATCTGGCCGATTTACGCTCATTACAGGACTGGTTTCTCAAATATGAGCTGAAAACCATCCCTGACGTTGCGGAAGTGGCGTCGGTGGGCGGTGTGGTGAAAGAGTATCAGGTGGTTATCGATCCCCAGCGCCTGGCGCAGTATGGCATCAGTCTCGCCGAAGTAAAAAGCGCGCTGGATGCTTCAAACCAGGAAGCGGGCGGTTCGTCGATCGAACTGGCGGAAGCGGAATATATGGTGCGCGCCAGCGGCTATCTGCAAACGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGATCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAACCTCAGCGGCAAGTTGCTGGAAGAGTTTATTGTGGTGGCGGTAGTCTGTGCGCTGTTTCTCTGGCATGTGCGCTCGGCGCTGGTGGCGATTATTTCGTTGCCGCTGGGGTTGTGTATTGCTTTTATTGTCATGCACTTCCAGGGACTGAATGCCAATATTATGTCGTTGGGTGGCATTGCGATTGCCGTCGGGGCGATGGTCGATGCTGCTATCGTCATGATCGAGAATGCGCATAAACGGCTGGAAGAGTGGCAGCACCAGCATCCTGACGCCACGCTGGATAATAAAACGCGCTGGCAGGTGATCACCGATGCGTCTGTTGAAGTGGGGCCGGCGCTATTTATCAGTCTGCTGATTATCACGTTGTCGTTTATCCCGATCTTCACCCTGGAAGGGCAGGAAGGGCGTCTGTTTGGCCCGTTGGCGTTCACCAAAACGTATGCGATGGCGGGTGCGGCGCTGCTGGCGATCGTAGTGATCCCGATCCTGATGGGCTACTGGATCCGTGGCAAAATTCCGCCGGAAAGCAGTAACCCGCTCAATCGCTTTTTGATTCGTGTTTATCATCCGCTGTTGCTGAAAGTACTGCACTGGCCGAAAACCACGCTGCTGGTGGCGGCGCTTTCGGTGCTGACGGTTCTCTGGCCGCTCAATAAAGTTGGCGGGGAATTTTTACCGCAGATCAATGAAGGCGACTTGTTGTATATGCCATCGACGCTGCCGGGGATTTCCGCAGCAGAGGCGGCGAGTATGCTGCAAAAAACCGACAAGCTAATTATGAGCGTACCTGAAGTGGCGCGGGTATTTGGCAAAACCGGGAAAGCGGAAACCGCCACCGATTCTGCTCCGCTGGAGATGGTAGAAACGACCATCCAGCTTAAGCCGCAGGAGCAGTGGCGGCCAGGCATGACGATGGACAAAATCATTGAGGAACTGGATAACACCGTGCGGCTGCCGGGGCTGGCGAATCTGTGGGTGCCGCCAATTCGTAACCGTATCGATATGCTCTCAACCGGCATTAAAAGCCCCATCGGCATTAAAGTTTCCGGCACTGTGCTGGCGGATATCGACGCGATGGCTGAGCAAATTGAAGAAGTAGCGCGAACGGTGCCAGGCGTAGCTTCTGCGCTTGCCGAGCGGCTGGAAGGTGGGCGCTATATCAACGTTGAGATTAACCGTGAAAAAGCCGCACGTTACGGTATGACGGTGGCGGATGTGCAGTTGTTTGTGACTTCTGCGGTGGGCGGGGCGATGGTTGGCGAAACGGTGGAAGGGATTGCCCGTTATCCAATTAATCTGCGTTATCCGCAAAGCTGGCGCGATAGTCCGCAGGCACTGCGCCAGCTGCCGATCCTGACGCCGATGAAGCAGCAAATCACCCTGGCAGACGTGGCCGACATTAAAGTCTCTACCGGACCGTCGATGCTGAAAACCGAGAATGCGCGCCCGACGAGCTGGATTTATATCGATGCCCGCGATCGTGACATGGTGTCGGTGGTTCACGATTTGCAAAAAGCGATAGCTGAAAAAGTGCAGTTAAAACCGGGCACCAGCGTGGCATTCTCCGGGCAGTTCGAGCTACTGGAGCGCGCCAACCATAAGCTTAAACTCATGGTGCCGATGACGTTGATGATTATCTTCGTGCTGTTGTATCTGGCGTTCCGTCGGGTGGGCGAAGCGTTGCTGATTATCAGCAGCGTACCGTTTGCGCTGGTGGGCGGCATCTGGTTGCTGTGGTGGATGGGCTTTCATCTTTCCGTGGCGACGGGCACTGGCTTTATCGCCCTCGCCGGGGTCGCCGCCGAATTTGGCGTGGTGATGCTGATGTATTTACGTCACGCCATAGAGGCCGTGCCGTCGTTGAATAATCCACAAACATTCAGCGAGCAGAAGCTGGATGAGGCGTTATATCACGGCGCGGTCCTGCGCGTGCGCCCGAAAGCGATGACGGTGGCGGTGATTATCGCCGGTCTGCTGCCGATTCTGTGGGGAACGGGGGCTGGTTCAGAGGTGATGAGCCGGATTGCCGCGCCGATGATTGGCGGCATGATCACCGCACCTTTGCTGTCGCTGTTTATTATCCCGGCGGCGTATAAGCTGATGTGGCTGCACCGACATCGGGTACGGAAATAA", - "dna_sequence_length": 3144, - "functions": [ - "copper/silver efflux system, membrane component" - ], - "id": "CDS_571", - "location": [ - [ - "NC_000913", - 598714, - "+", - 3144 - ] - ], - "md5": "05a4519422d434badeeffb8707ab416b", - "parent_gene": "", - "protein_md5": "92dbcf9a481b2bf5f4dd8dbff085f95f", - "protein_translation": "MIEWIIRRSVANRFLVLMGALFLSIWGTWTIINTPVDALPDLSDVQVIIKTSYPGQAPQIVENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTDPYWARSRVLEYLNQVQGKLPAGVSAELGPDATGVGWIYEYALVDRSGKHDLADLRSLQDWFLKYELKTIPDVAEVASVGGVVKEYQVVIDPQRLAQYGISLAEVKSALDASNQEAGGSSIELAEAEYMVRASGYLQTLDDFNHIVLKASENGVPVYLRDVAKVQIGPEMRRGIAELNGEGEVAGGVVILRSGKNAREVIAAVKDKLETLKSSLPEGVEIVTTYDRSQLIDRAIDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMHFQGLNANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEVGPALFISLLIITLSFIPIFTLEGQEGRLFGPLAFTKTYAMAGAALLAIVVIPILMGYWIRGKIPPESSNPLNRFLIRVYHPLLLKVLHWPKTTLLVAALSVLTVLWPLNKVGGEFLPQINEGDLLYMPSTLPGISAAEAASMLQKTDKLIMSVPEVARVFGKTGKAETATDSAPLEMVETTIQLKPQEQWRPGMTMDKIIEELDNTVRLPGLANLWVPPIRNRIDMLSTGIKSPIGIKVSGTVLADIDAMAEQIEEVARTVPGVASALAERLEGGRYINVEINREKAARYGMTVADVQLFVTSAVGGAMVGETVEGIARYPINLRYPQSWRDSPQALRQLPILTPMKQQITLADVADIKVSTGPSMLKTENARPTSWIYIDARDRDMVSVVHDLQKAIAEKVQLKPGTSVAFSGQFELLERANHKLKLMVPMTLMIIFVLLYLAFRRVGEALLIISSVPFALVGGIWLLWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAVPSLNNPQTFSEQKLDEALYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGMITAPLLSLFIIPAAYKLMWLHRHRVRK", - "protein_translation_length": 1047, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415108.1" - ], - [ - "gene_synonym", - "b0576" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24207" - ], - [ - "gene_synonym", - "JW0565" - ], - [ - "gene_synonym", - "ECK0568" - ], - [ - "gene_synonym", - "ASAP:ABE-0001976" - ], - [ - "gene_synonym", - "pheP" - ], - [ - "gene_synonym", - "GI:16128559" - ], - [ - "gene_synonym", - "GeneID:945199" - ], - [ - "gene_synonym", - "EcoGene:EG10708" - ] - ], - "dna_sequence": "GTGAAAAACGCGTCAACCGTATCGGAAGATACTGCGTCGAATCAAGAGCCGACGCTTCATCGCGGATTACATAACCGTCATATTCAACTGATTGCGTTGGGTGGCGCAATTGGTACTGGTCTGTTTCTTGGCATTGGCCCGGCGATTCAGATGGCGGGTCCGGCTGTATTGCTGGGCTACGGCGTCGCCGGGATCATCGCTTTCCTGATTATGCGCCAGCTTGGCGAAATGGTGGTTGAGGAGCCGGTATCCGGTTCATTTGCCCACTTTGCCTATAAATACTGGGGACCGTTTGCGGGCTTCCTCTCTGGCTGGAACTACTGGGTAATGTTCGTGCTGGTGGGAATGGCAGAGCTGACCGCTGCGGGCATCTATATGCAGTACTGGTTCCCGGATGTTCCAACGTGGATTTGGGCTGCCGCCTTCTTTATTATCATCAACGCCGTTAACCTGGTGAACGTGCGCTTATATGGCGAAACCGAGTTCTGGTTTGCGTTGATTAAAGTGCTGGCAATCATCGGTATGATCGGCTTTGGCCTGTGGCTGCTGTTTTCTGGTCACGGCGGCGAGAAAGCCAGTATCGACAACCTCTGGCGCTACGGTGGTTTCTTCGCCACCGGCTGGAATGGGCTGATTTTGTCGCTGGCGGTAATTATGTTCTCCTTCGGCGGTCTGGAGCTGATTGGGATTACTGCCGCTGAAGCGCGCGATCCGGAAAAAAGCATTCCAAAAGCGGTAAATCAGGTGGTGTATCGCATCCTGCTGTTTTACATCGGTTCACTGGTGGTTTTACTGGCGCTCTATCCGTGGGTGGAAGTGAAATCCAACAGTAGCCCGTTTGTGATGATTTTCCATAATCTCGACAGCAACGTGGTAGCTTCTGCGCTGAACTTCGTCATTCTGGTAGCATCGCTGTCAGTGTATAACAGCGGGGTTTACTCTAACAGCCGCATGCTGTTTGGCCTTTCTGTGCAGGGTAATGCGCCGAAGTTTTTGACTCGCGTCAGCCGTCGCGGTGTGCCGATTAACTCGCTGATGCTTTCCGGAGCGATCACTTCGCTGGTGGTGTTAATCAACTATCTGCTGCCGCAAAAAGCGTTTGGTCTGCTGATGGCGCTGGTGGTAGCAACGCTGCTGTTGAACTGGATTATGATCTGTCTGGCGCATCTGCGTTTTCGTGCAGCGATGCGACGTCAGGGGCGTGAAACACAGTTTAAGGCGCTGCTCTATCCGTTCGGCAACTATCTCTGCATTGCCTTCCTCGGCATGATTTTGCTGCTGATGTGCACGATGGATGATATGCGCTTGTCAGCGATCCTGCTGCCGGTGTGGATTGTATTCCTGTTTATGGCATTTAAAACGCTGCGTCGGAAATAA", - "dna_sequence_length": 1377, - "functions": [ - "phenylalanine transporter" - ], - "id": "CDS_572", - "location": [ - [ - "NC_000913", - 601959, - "+", - 1377 - ] - ], - "md5": "de352c20e5ed2bb3c7c983c368fd39aa", - "parent_gene": "", - "protein_md5": "c01e52570bc428020ce975b55bfd4c97", - "protein_translation": "MKNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMRRQGRETQFKALLYPFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFMAFKTLRRK", - "protein_translation_length": 458, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0577" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAT4" - ], - [ - "gene_synonym", - "JW0566" - ], - [ - "gene_synonym", - "NP_415109.1" - ], - [ - "gene_synonym", - "EcoGene:EG12620" - ], - [ - "gene_synonym", - "mscM" - ], - [ - "gene_synonym", - "ECK0569" - ], - [ - "gene_synonym", - "GI:16128560" - ], - [ - "gene_synonym", - "GeneID:946243" - ], - [ - "gene_synonym", - "ybdG" - ], - [ - "gene_synonym", - "ASAP:ABE-0001978" - ] - ], - "dna_sequence": "ATGCAGGATTTAATATCCCAGGTTGAAGATTTAGCGGGTATTGAGATCGATCACACCACCTCGATGGTGATGATTTTCGGTATTATTTTTCTGACCGCCGTCGTGGTGCATATTATTTTGCATTGGGTGGTACTGCGGACCTTCGAAAAACGTGCCATCGCCAGTTCACGGCTTTGGTTGCAAATCATTACCCAGAATAAACTCTTCCACCGTTTAGCTTTTACCCTGCAGGGGATTATCGTCAATATTCAGGCGGTATTCTGGCTGCAAAAAGGCACCGAAGCGGCAGATATTCTGACTACCTGCGCGCAGTTGTGGATCATGATGTATGCGCTGCTTTCAGTCTTCTCGTTGCTGGATGTTATTTTGAATCTGGCGCAGAAATTCCCGGCAGCATCTCAGTTACCGCTGAAAGGGATATTTCAGGGGATTAAACTGATCGGCGCGATTCTGGTCGGCATTTTGATGATCTCGCTGCTGATTGGTCAGTCGCCAGCGATTCTGATCAGCGGTCTTGGTGCAATGGCTGCCGTGCTGATGTTGGTATTTAAAGATCCGATTCTTGGTCTGGTGGCAGGTATTCAGCTTTCCGCGAACGATATGCTGAAACTGGGCGACTGGCTGGAGATGCCGAAATACGGCGCGGATGGCGCGGTGATCGATATTGGGTTAACCACCGTCAAAGTGCGTAACTGGGACAATACCATTACCACTATTCCCACCTGGTCTCTGGTTTCTGACTCCTTTAAAAACTGGAGCGGGATGTCAGCATCTGGCGGGCGACGTATTAAGCGCAGTATCAGTATTGATGTCACCAGTATTCGTTTTCTTGATGAAGACGAAATGCAACGTCTGAATAAAGCGCATTTGTTAAAGCCTTATTTAACCAGCCGCCATCAGGAAATTAATGAGTGGAATCGCCAGCAAGGTTCTACGGAGTCGGTATTAAATCTGCGCCGAATGACCAATATTGGAACCTTTCGTGCCTATCTGAACGAATATCTGCGTAACCATCCGCGGATTCGTAAAGATATGACCTTAATGGTACGCCAACTGGCTCCAGGTGATAACGGTTTACCGCTCGAGATCTACGCGTTTACTAACACCGTGGTGTGGCTGGAATATGAAAGCATTCAGGCTGATATATTCGATCACATATTTGCGATTGTCGAAGAGTTTGGTCTGCGACTTCATCAGTCGCCAACCGGCAATGATATTCGCTCTCTGGCGGGTGCATTTAAGCAGTAA", - "dna_sequence_length": 1248, - "functions": [ - "mechanosensitive channel protein, miniconductance" - ], - "id": "CDS_573", - "location": [ - [ - "NC_000913", - 604663, - "-", - 1248 - ] - ], - "md5": "b985c3ea2ac8abb0ed5d17451c9a61ae", - "parent_gene": "", - "protein_md5": "ce163b9d313c84677e27b85a4257e144", - "protein_translation": "MQDLISQVEDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVVLRTFEKRAIASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTCAQLWIMMYALLSVFSLLDVILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLLIGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGAVIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRFLDEDEMQRLNKAHLLKPYLTSRHQEINEWNRQQGSTESVLNLRRMTNIGTFRAYLNEYLRNHPRIRKDMTLMVRQLAPGDNGLPLEIYAFTNTVVWLEYESIQADIFDHIFAIVEEFGLRLHQSPTGNDIRSLAGAFKQ", - "protein_translation_length": 415, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415110.1" - ], - [ - "gene_synonym", - "nfsB" - ], - [ - "gene_synonym", - "ECK0570" - ], - [ - "gene_synonym", - "GeneID:945778" - ], - [ - "gene_synonym", - "ntr" - ], - [ - "gene_synonym", - "nfsI" - ], - [ - "gene_synonym", - "GI:16128561" - ], - [ - "gene_synonym", - "b0578" - ], - [ - "gene_synonym", - "JW0567" - ], - [ - "gene_synonym", - "EcoGene:EG20151" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38489" - ], - [ - "gene_synonym", - "dprA" - ], - [ - "gene_synonym", - "nfnB" - ], - [ - "gene_synonym", - "ASAP:ABE-0001981" - ] - ], - "dna_sequence": "ATGGATATCATTTCTGTCGCCTTAAAGCGTCATTCCACTAAGGCATTTGATGCCAGCAAAAAACTTACCCCGGAACAGGCCGAGCAGATCAAAACGCTACTGCAATACAGCCCATCCAGCACCAACTCCCAGCCGTGGCATTTTATTGTTGCCAGCACGGAAGAAGGTAAAGCGCGTGTTGCCAAATCCGCTGCCGGTAATTACGTGTTCAACGAGCGTAAAATGCTTGATGCCTCGCACGTCGTGGTGTTCTGTGCAAAAACCGCGATGGACGATGTCTGGCTGAAGCTGGTTGTTGACCAGGAAGATGCCGATGGCCGCTTTGCCACGCCGGAAGCGAAAGCCGCGAACGATAAAGGTCGCAAGTTCTTCGCTGATATGCACCGTAAAGATCTGCATGATGATGCAGAGTGGATGGCAAAACAGGTTTATCTCAACGTCGGTAACTTCCTGCTCGGCGTGGCGGCTCTGGGTCTGGACGCGGTACCCATCGAAGGTTTTGACGCCGCCATCCTCGATGCAGAATTTGGTCTGAAAGAGAAAGGCTACACCAGTCTGGTGGTTGTTCCGGTAGGTCATCACAGCGTTGAAGATTTTAACGCTACGCTGCCGAAATCTCGTCTGCCGCAAAACATCACCTTAACCGAAGTGTAA", - "dna_sequence_length": 654, - "functions": [ - "dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive" - ], - "id": "CDS_574", - "location": [ - [ - "NC_000913", - 605424, - "-", - 654 - ] - ], - "md5": "cfc2517836c228056552b29e5677c7be", - "parent_gene": "", - "protein_md5": "71b3ae7ca1eb03906e6892cf4f9f8c00", - "protein_translation": "MDIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQPWHFIVASTEEGKARVAKSAAGNYVFNERKMLDASHVVVFCAKTAMDDVWLKLVVDQEDADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLDAVPIEGFDAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV", - "protein_translation_length": 217, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415111.1" - ], - [ - "gene_synonym", - "ECK0571" - ], - [ - "gene_synonym", - "b0579" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAT2" - ], - [ - "gene_synonym", - "ASAP:ABE-0001986" - ], - [ - "gene_synonym", - "GI:16128562" - ], - [ - "gene_synonym", - "GeneID:948302" - ], - [ - "gene_synonym", - "JW5083" - ], - [ - "gene_synonym", - "EcoGene:EG12619" - ], - [ - "gene_synonym", - "ybdF" - ] - ], - "dna_sequence": "ATGGATAAGCAATCACTGCACGAAACGGCGAAACGCCTGGCCCTTGAGTTACCCTTTGTCGAGCTTTGCTGGCCTTTTGGCCCGGAGTTCGATGTTTTTAAAATTGGCGGCAAGATTTTTATGCTGTCGTCGGAGCTACGCGGCGTCCCCTTTATCAATCTGAAGTCCGATCCACAAAAATCCCTGTTAAATCAGCAAATATACCCAAGCATTAAGCCAGGGTATCACATGAATAAAAAGCACTGGATTTCAGTGTATCCCGGCGAAGAAATCTCCGAAGCGTTACTTCGCGATCTGATCAACGATTCGTGGAATCTGGTGGTTGATGGTCTGGCTAAACGCGATCAAAAAAGAGTGCGTCCAGGCTAA", - "dna_sequence_length": 369, - "functions": [ - "DUF419 family protein" - ], - "id": "CDS_575", - "location": [ - [ - "NC_000913", - 605886, - "-", - 369 - ] - ], - "md5": "21c13c075799744be0b4cc5a18e641d9", - "parent_gene": "", - "protein_md5": "8d241ef618e7f1fecb13aacce1696495", - "protein_translation": "MDKQSLHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSSELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLINDSWNLVVDGLAKRDQKRVRPG", - "protein_translation_length": 122, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0569" - ], - [ - "gene_synonym", - "b0580" - ], - [ - "gene_synonym", - "ECK0572" - ], - 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"MKHPLETLTTAAGILLMAFLSCLLLPAPALGLALAQKLVTMFHLMDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSLAD", - "protein_translation_length": 82, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0581" - ], - [ - "gene_synonym", - "GeneID:947246" - ], - [ - "gene_synonym", - "ECK0573" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77213" - ], - [ - "gene_synonym", - "GI:16128564" - ], - [ - "gene_synonym", - "ybdK" - ], - [ - "gene_synonym", - "EcoGene:EG13644" - ], - [ - "gene_synonym", - "NP_415113.1" - ], - [ - "gene_synonym", - "JW0570" - ], - [ - "gene_synonym", - "ASAP:ABE-0001992" - ] - ], - "dna_sequence": "ATGCCATTACCCGATTTTCATGTTTCTGAACCTTTTACCCTCGGTATTGAACTGGAAATGCAGGTGGTTAATCCGCCGGGCTATGACTTAAGCCAGGACTCTTCAATGCTGATTGACGCGGTTAAAAATAAGATCACGGCCGGAGAGGTAAAGCACGATATCACCGAAAGTATGCTGGAGCTGGCGACGGATGTTTGCCGTGATATCAACCAGGCTGCCGGGCAGTTTTCAGCGATGCAGAAAGTCGTATTGCAGGCAGCCACAGACCATCATCTGGAAATTTGCGGCGGTGGCACGCACCCGTTTCAGAAATGGCAGCGTCAGGAGGTATGCGATAACGAACGCTATCAACGCACGCTGGAAAACTTTGGTTATCTCATTCAGCAGGCGACCGTTTTTGGTCAGCATGTCCATGTTGGCTGCGCCAGTGGCGATGACGCCATTTATTTGCTGCACGGCTTGTCACGATTTGTGCCGCACTTTATCGCCCTTTCCGCCGCGTCGCCATATATGCAGGGAACGGATACGCGTTTTGCCTCCTCACGACCGAATATTTTTTCCGCCTTTCCTGATAATGGCCCGATGCCGTGGGTCAGTAACTGGCAACAATTTGAAGCCCTGTTTCGCTGTCTGAGTTACACCACGATGATCGACAGCATTAAAGATCTGCACTGGGATATTCGCCCCAGTCCTCATTTTGGCACGGTGGAGGTTCGGGTGATGGATACCCCGTTAACCCTTAGCCACGCAGTAAATATGGCGGGATTAATTCAGGCTACCGCCCACTGGTTACTGACGGAACGCCCGTTTAAACATCAGGAAAAAGATTACCTGCTGTATAAATTCAACCGTTTCCAGGCCTGTCGCTATGGGCTTGAAGGCGTCATCACCGATCCGCACACTGGAGATCGTCGACCGCTAACGGAAGATACCTTGCGATTGCTGGAAAAAATCGCCCCTTCCGCACATAAAATTGGTGCATCGAGCGCGATTGAGGCCCTGCATCGCCAGGTCGTCAGCGGTCTGAATGAAGCGCAGCTAATGCGCGATTTCGTCGCCGATGGCGGCTCGCTGATTGGGCTGGTGAAAAAGCATTGTGAGATCTGGGCCGGTGACTAA", - "dna_sequence_length": 1119, - "functions": [ - "weak gamma-glutamyl:cysteine ligase" - ], - "id": "CDS_577", - "location": [ - [ - "NC_000913", - 607383, - "-", - 1119 - ] - ], - "md5": "4c1c8b64d770ce60fdd429fa27765fb1", - "parent_gene": "", - "protein_md5": "9f6841829a4c413f0530095c54cb8d76", - "protein_translation": "MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNKITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMIDSIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEALHRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWAGD", - "protein_translation_length": 372, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0574" - ], - [ - "gene_synonym", - "ybdY" - ], - [ - "gene_synonym", - "GeneID:2847715" - ], - [ - "gene_synonym", - "hokE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77091" - ], - [ - "gene_synonym", - "JW5084" - ], - [ - "gene_synonym", - "b4415" - ], - [ - "gene_synonym", - "YP_025295.1" - ], - [ - "gene_synonym", - "EcoGene:EG14302" - ], - [ - "gene_synonym", - "GI:49176035" - ], - [ - "gene_synonym", - "ASAP:ABE-0047279" - ] - ], - "dna_sequence": "ATGCTGACGAAATATGCCCTTGCGGCAGTCATAGTGCTGTGTTTAACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTCGCTGTGTGAGTTTACGGTGAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAG", - "dna_sequence_length": 153, - "functions": [ - "toxic polypeptide, small" - ], - "id": "CDS_578", - "location": [ - [ - "NC_000913", - 607836, - "+", - 153 - ] - ], - "md5": "92909221b3e4af2cefc68492cbdcc8c6", - "parent_gene": "", - "protein_md5": "62eb3de9aef5a0f213e6e86136e99a2a", - "protein_translation": "MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK", - "protein_translation_length": 50, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0582" - ], - [ - "gene_synonym", - "NP_415114.1" - ], - [ - "gene_synonym", - "EcoGene:EG40012" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF92" - ], - [ - "gene_synonym", - "insL1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002007" - ], - [ - "gene_synonym", - "GI:16128565" - ], - [ - "gene_synonym", - "ECK0016" - ], - [ - "gene_synonym", - "GeneID:945200" - ] - ], - "dna_sequence": "ATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCTGAAGCGGCTGCGGAATGCCGCCGACTGGTTTGGCATACTTGCCGCACAAACACTTGCTGTACGCGCCGCAGTTACGGGTTGTACAAGCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGGCGGCAGCGCTGAATGGCGACTACATATGGGATATGATCCTCATACCTGTCAGTTCACTGATTTTGAGCTAACCGACAGCAGAGACGCTGAACGGCTGGACCGATTTGCGCAAACGGCAGACGAGATACGCATTGCTGACCGGGGATTCGGTTCGCGTCCCGAATGTATCCGCTCACTTGCTTTTGGAGAAGCTGATTATATCGTCCGGGTTCACTGGCGAGGATTGCGCTGGTTAACTGCAGAAGGAATGCGCTTTGACATGATGGGTTTTCTGCGCGGGCTGGATTGCGGTAAGAACGGTGAAACCACTGTAATGATAGGCAATTCAGGTAATAAAAAAGCCGGAGCTCCCTTTCCGGCACGTCTCATTGCCGTATCACTTCCTCCCGAAAAAGCATTAATCAGTAAAACCCGACTGCTCAGCGAGAATCGTCGAAAAGGACGAGTAGTTCAGGCGGAAACGCTGGAAGCAGCGGGCCATGTGCTATTGCTAACATCATTACCGGAAGATGAATATTCAGCAGAGCAAGTGGCTGATTGTTACCGTCTGCGATGGCAAATTGAACTGGCTTTTAAGCGGCTCAAAAGTTTGCTGCACCTGGATGCTTTGCGTGCAAAGGAACCTGAACTCGCGAAAGCGTGGATATTTGCTAATCTACTCGCCGCATTTTTAATTGACGACATAATCCAGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAA", - "dna_sequence_length": 1113, - "functions": [ - "IS186 transposase" - ], - "id": "CDS_579", - "location": [ - [ - "NC_000913", - 608065, - "+", - 1113 - ] - ], - "md5": "3fce9c70c9584709b648ad88256d7bb8", - "parent_gene": "", - "protein_md5": "4dc27d1a21f12988eb2f603aa2b9828d", - "protein_translation": "MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN", - "protein_translation_length": 370, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0583" - ], - [ - "gene_synonym", - "ASAP:ABE-0002009" - ], - [ - "gene_synonym", - "entD" - ], - [ - "gene_synonym", - "ECK0575" - ], - [ - "gene_synonym", - "GeneID:945194" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P19925" - ], - [ - "gene_synonym", - "JW5085" - ], - [ - "gene_synonym", - "NP_415115.2" - ], - [ - "gene_synonym", - "GI:345452717" - ], - [ - "gene_synonym", - "EcoGene:EG10262" - ] - ], - "dna_sequence": "ATGAAAACTACGCATACCTCCCTCCCCTTTGCCGGACATACGCTGCATTTTGTTGAGTTCGATCCGGCGAATTTTTGTGAGCAGGATTTACTCTGGCTGCCGCACTACGCACAACTGCAACACGCTGGACGTAAACGTAAAACAGAGCATTTAGCCGGACGGATCGCTGCTGTTTATGCTTTGCGGGAATATGGCTATAAATGTGTGCCCGCAATCGGCGAGCTACGCCAACCTGTCTGGCCTGCGGAGGTATACGGCAGTATTAGCCACTGTGGGACTACGGCATTAGCCGTGGTATCTCGTCAACCGATTGGCATTGATATAGAAGAAATTTTTTCTGTACAAACCGCAAGAGAATTGACAGACAACATTATTACACCAGCGGAACACGAGCGACTCGCAGACTGCGGTTTAGCCTTTTCTCTGGCGCTGACACTGGCATTTTCCGCCAAAGAGAGCGCATTTAAGGCAAGTGAGATCCAAACTGATGCAGGTTTTCTGGACTATCAGATAATTAGCTGGAATAAACAGCAGGTCATCATTCATCGTGAGAATGAGATGTTTGCTGTGCACTGGCAGATAAAAGAAAAGATAGTCATAACGCTGTGCCAACACGATTAA", - "dna_sequence_length": 621, - "functions": [ - "phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex" - ], - "id": "CDS_580", - "location": [ - [ - "NC_000913", - 610079, - "-", - 621 - ] - ], - "md5": "13891ce9d849fdd000aced9316eb407b", - "parent_gene": "", - "protein_md5": "1c7f04a3b758e9f0e105572c9db86c96", - "protein_translation": "MKTTHTSLPFAGHTLHFVEFDPANFCEQDLLWLPHYAQLQHAGRKRKTEHLAGRIAAVYALREYGYKCVPAIGELRQPVWPAEVYGSISHCGTTALAVVSRQPIGIDIEEIFSVQTARELTDNIITPAEHERLADCGLAFSLALTLAFSAKESAFKASEIQTDAGFLDYQIISWNKQQVIIHRENEMFAVHWQIKEKIVITLCQHD", - "protein_translation_length": 206, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05825" - ], - [ - "gene_synonym", - "ECK0576" - ], - [ - "gene_synonym", - "GeneID:945193" - ], - [ - "gene_synonym", - "cbt" - ], - [ - "gene_synonym", - "b0584" - ], - [ - "gene_synonym", - "ASAP:ABE-0002014" - ], - [ - "gene_synonym", - "cbr" - ], - [ - "gene_synonym", - "GI:16128567" - ], - [ - "gene_synonym", - "JW5086" - ], - [ - "gene_synonym", - "EcoGene:EG10293" - ], - [ - "gene_synonym", - "fep" - ], - [ - "gene_synonym", - "NP_415116.1" - ], - [ - "gene_synonym", - "feuB" - ], - [ - "gene_synonym", - "fepA" - ] - ], - "dna_sequence": "ATGAACAAGAAGATTCATTCCCTGGCCTTGTTGGTCAATCTGGGGATTTATGGGGTAGCGCAGGCACAAGAGCCGACCGATACTCCTGTTTCACATGACGATACTATTGTCGTTACCGCCGCCGAGCAGAACTTACAGGCGCCTGGCGTTTCGACCATCACCGCAGATGAAATCCGCAAAAACCCGGTTGCCCGCGATGTGTCGAAGATCATCCGTACCATGCCAGGCGTTAACCTGACCGGTAACTCCACCAGTGGTCAGCGTGGGAATAACCGACAGATTGATATTCGCGGTATGGGTCCGGAAAACACGCTGATTTTGATTGACGGCAAGCCGGTAAGCAGCCGTAACTCGGTGCGTCAGGGCTGGCGTGGCGAGCGCGATACCCGTGGTGATACTTCCTGGGTGCCACCTGAAATGATTGAACGTATTGAAGTTCTGCGTGGTCCGGCAGCTGCGCGTTATGGCAACGGCGCGGCGGGCGGCGTGGTTAACATCATTACCAAAAAAGGCAGCGGCGAGTGGCACGGCTCCTGGGACGCATATTTCAATGCGCCAGAACATAAAGAGGAAGGTGCCACCAAACGCACTAACTTTAGCCTGACCGGTCCGCTGGGCGACGAATTCAGCTTCCGTTTGTATGGCAACCTCGACAAAACCCAGGCTGACGCGTGGGATATCAACCAGGGCCATCAGTCCGCGCGTGCCGGAACGTATGCCACGACGTTACCAGCCGGGCGCGAAGGGGTAATCAACAAAGATATTAATGGCGTGGTGCGCTGGGATTTCGCGCCATTGCAATCGCTGGAACTGGAAGCAGGTTACAGCCGCCAGGGTAACCTGTATGCGGGCGACACCCAGAATACCAACTCCGATTCCTATACCCGCTCGAAATATGGCGATGAAACCAACCGTCTGTATCGCCAGAACTACGCGCTGACCTGGAACGGTGGCTGGGATAACGGCGTGACCACCAGCAACTGGGTGCAGTACGAACACACCCGTAACTCGCGTATTCCGGAAGGTCTGGCGGGCGGTACCGAAGGGAAATTTAACGAAAAAGCGACACAGGATTTCGTCGATATCGATCTTGATGACGTGATGCTGCACAGCGAAGTTAACCTGCCGATTGATTTCCTCGTTAACCAGACGCTGACGCTGGGTACGGAGTGGAATCAGCAACGGATGAAGGACTTAAGTTCCAACACCCAGGCACTGACCGGAACGAATACCGGTGGCGCTATTGATGGCGTGAGTACCACCGACCGTAGCCCGTATTCAAAAGCAGAAATTTTCTCGCTGTTTGCCGAAAACAACATGGAGCTGACTGACAGCACCATCGTAACGCCGGGGCTGCGTTTCGATCATCACAGTATTGTCGGCAATAACTGGAGCCCGGCGCTGAACATATCGCAAGGTTTAGGCGATGACTTCACGCTGAAAATGGGCATCGCCCGTGCTTATAAAGCGCCGAGCCTGTACCAGACTAACCCGAACTACATTCTCTACAGTAAAGGTCAGGGTTGCTATGCCAGCGCGGGCGGCTGCTATCTGCAAGGTAACGATGACCTGAAAGCAGAAACCAGCATCAACAAAGAGATTGGTCTGGAGTTCAAACGCGACGGGTGGCTGGCGGGCGTCACCTGGTTCCGTAACGATTATCGCAATAAGATTGAAGCGGGCTATGTGGCTGTAGGGCAAAACGCAGTCGGCACCGATCTCTATCAGTGGGATAACGTGCCGAAAGCGGTGGTTGAAGGTCTGGAAGGATCGTTAAACGTACCGGTTAGCGAAACGGTGATGTGGACCAATAACATCACTTATATGCTGAAGAGTGAAAACAAAACCACGGGCGACCGTTTGTCGATCATCCCGGAGTATACGTTGAACTCAACGCTGAGCTGGCAGGCACGGGAAGATTTGTCGATGCAAACGACCTTCACCTGGTACGGCAAGCAGCAGCCGAAGAAGTACAACTATAAAGGTCAGCCAGCGGTTGGACCGGAAACCAAAGAAATTAGTCCTTACAGCATTGTTGGCCTGAGCGCGACCTGGGATGTGACGAAGAATGTCAGTCTGACCGGCGGCGTGGACAATCTGTTCGACAAACGTTTGTGGCGTGCGGGTAATGCCCAGACCACGGGCGATTTGGCAGGGGCCAACTATATCGCCGGTGCCGGGGCGTATACCTATAACGAGCCGGGACGTACGTGGTATATGAGCGTAAACACCCACTTCTGA", - "dna_sequence_length": 2241, - "functions": [ - "ferrienterobactin outer membrane transporter" - ], - "id": "CDS_581", - "location": [ - [ - "NC_000913", - 612494, - "-", - 2241 - ] - ], - "md5": "a01806e84eb88c22124e09ecf506f212", - "parent_gene": "", - "protein_md5": "94e331a303dfbb0f008f23e8051db098", - "protein_translation": "MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQNLQAPGVSTITADEIRKNPVARDVSKIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLDKTQADAWDINQGHQSARAGTYATTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNSDSYTRSKYGDETNRLYRQNYALTWNGGWDNGVTTSNWVQYEHTRNSRIPEGLAGGTEGKFNEKATQDFVDIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWNQQRMKDLSSNTQALTGTNTGGAIDGVSTTDRSPYSKAEIFSLFAENNMELTDSTIVTPGLRFDHHSIVGNNWSPALNISQGLGDDFTLKMGIARAYKAPSLYQTNPNYILYSKGQGCYASAGGCYLQGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEAGYVAVGQNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMLKSENKTTGDRLSIIPEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNYKGQPAVGPETKEISPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGANYIAGAGAYTYNEPGRTWYMSVNTHF", - "protein_translation_length": 746, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:635341462" - ], - [ - "gene_synonym", - "ECK0577" - ], - [ - "gene_synonym", - "ASAP:ABE-0002019" - ], - [ - "gene_synonym", - "b0585" - ], - [ - "gene_synonym", - "NP_415117.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P13039" - ], - [ - "gene_synonym", - "JW0576" - ], - [ - "gene_synonym", - "fes" - ], - [ - "gene_synonym", - "GeneID:945181" - ], - [ - "gene_synonym", - "EcoGene:EG10299" - ] - ], - "dna_sequence": "GTGACGGCGTTAAAAGTAGGAAGTGAGAGCTGGTGGCAGTCGAAACATGGCCCGGAATGGCAGCGTCTGAATGACGAAATGTTTGAGGTCACTTTCTGGTGGCGTGATCCCCAAGGTTCTGAAGAATACTCGACGATAAAGCGCGTATGGGTCTACATCACTGGTGTGACCGATCACCATCAGAACAGCCAGCCCCAGTCGATGCAGCGAATTGCAGGCACTAACGTCTGGCAGTGGACGACACAACTCAATGCCAACTGGCGCGGCAGCTACTGCTTTATTCCCACCGAACGCGATGACATTTTTTCTGTACCATCCCCCGATCGCCTCGAATTGCGCGAAGGCTGGCGAAAACTATTACCCCAGGCGATAGCCGATCCGCTGAACCTACAAAGCTGGAAAGGCGGGCGAGGGCACGCTGTTTCTGCACTCGAAATGCCGCAAGCGCCTCTGCAACCGGGATGGGATTGTCCGCAAGCGCCAGAAATACCTGCCAAAGAAATTATCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGTCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGATTTCTGGCTCGCAGTACAGCAAGAGTTATTACCCCTGGTGAAAGCTATTGCCCCTTTTAGCGATCGTGCCGATCGCACCGTGGTTGCCGGGCAGAGTTTTGGTGGGCTTTCCGCGCTGTATGCCGGACTGCACTGGCCTGAACGCTTTGGCTGTGTATTAAGCCAGTCAGGATCGTACTGGTGGCCGCATCGGGGCGGGCAGCAAGAGGGCGTGTTACTTGAAAAGCTAAAAGCTGGTGAAGTTAGCGCCGAAGGTCTGCGCATTGTGCTGGAAGCGGGTATTCGCGAGCCGATGATCATGCGGGCCAATCAGGCGCTGTATGCGCAATTACACCCCATAAAAGAATCCATTTTCTGGCGTCAGGTTGACGGCGGACATGATGCGCTTTGTTGGCGCGGTGGCTTGATGCAGGGGCTAATCGACCTCTGGCAACCACTTTTCCATGACAGGAGTTGA", 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"JW0577" - ], - [ - "gene_synonym", - "EcoGene:EG14353" - ], - [ - "gene_synonym", - "GeneID:1450243" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P18393" - ], - [ - "gene_synonym", - "ASAP:ABE-0285032" - ], - [ - "gene_synonym", - "b4511" - ], - [ - "gene_synonym", - "mbtH" - ] - ], - "dna_sequence": "ATGGCATTCAGTAATCCCTTCGATGATCCGCAGGGAGCGTTTTACATATTGCGCAATGCGCAGGGGCAATTCAGTCTGTGGCCGCAACAATGCGTCTTACCGGCAGGCTGGGACATTGTGTGTCAGCCGCAGTCACAGGCGTCCTGCCAGCAGTGGCTGGAAGCCCACTGGCGTACTCTGACACCGACGAATTTTACCCAGTTGCAGGAGGCACAATGA", - "dna_sequence_length": 219, - "functions": [ - "stimulator of EntF adenylation activity, MbtH-like" - ], - "id": "CDS_583", - "location": [ - [ - "NC_000913", - 613942, - "+", - 219 - ] - ], - "md5": "c1826f113eeaee30c647c48353a15cee", - "parent_gene": "", - "protein_md5": "786c1042684c5244e90cd312b3af7734", - "protein_translation": "MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCVLPAGWDIVCQPQSQASCQQWLEAHWRTLTPTNFTQLQEAQ", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0586" - ], - [ - "gene_synonym", - "ASAP:ABE-0002021" - ], - [ - "gene_synonym", - "entF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11454" - ], - [ - "gene_synonym", - "ECK0579" - ], - [ - "gene_synonym", - "GeneID:945184" - ], - [ - "gene_synonym", - "EcoGene:EG10264" - ], - [ - "gene_synonym", - "NP_415118.1" - ], - [ - "gene_synonym", - "GI:16128569" - ], - [ - "gene_synonym", - "JW0578" - ] - ], - "dna_sequence": "ATGAGCCAGCATTTACCTTTGGTCGCCGCACAGCCCGGCATCTGGATGGCAGAAAAACTGTCAGAATTACCCTCCGCCTGGAGCGTGGCGCATTACGTTGAGTTAACCGGAGAGGTTGATTCGCCATTACTGGCCCGCGCGGTGGTTGCCGGACTAGCGCAAGCAGATACGCTGCGGATGCGTTTTACGGAAGATAACGGCGAAGTCTGGCAGTGGGTCGATGATGCGCTGACGTTCGAACTGCCAGAAATTATCGACCTACGAACCAACATTGATCCGCACGGTACTGCGCAGGCATTAATGCAGGCGGATTTGCAACAAGATCTGCGCGTCGATAGCGGTAAACCACTGGTCTTTCATCAGCTGATACAGGTGGCGGATAACCGCTGGTACTGGTATCAGCGTTATCACCATTTGCTGGTCGATGGCTTTAGTTTCCCGGCCATTACCCGCCAGATCGCCAATATTTACTGCACATGGCTGCGTGGCGAACCAACGCCTGCTTCGCCATTTACGCCTTTCGCTGATGTAGTGGAAGAGTACCAGCAATACCGCGAAAGCGAAGCCTGGCAGCGTGATGCGGCATTCTGGGCAGAACAGCGTCGTCAACTGCCGCCGCCCGCGTCACTTTCTCCGGCACCTTTACCGGGGCGCAGCGCCTCGGCAGATATTCTGCGCCTGAAACTGGAATTTACCGACGGGGAATTCCGCCAGCTGGCTACGCAACTTTCAGGTGTGCAGCGTACCGATTTAGCCCTTGCGCTGGCAGCCTTGTGGCTGGGGCGATTGTGCAATCGTATGGACTACGCCGCCGGATTTATCTTTATGCGTCGACTGGGCTCGGCGGCGCTGACGGCTACCGGACCCGTGCTCAACGTTTTGCCGTTGGGTATTCACATTGCGGCGCAAGAAACGCTGCCGGAACTGGCAACCCGACTGGCAGCACAACTGAAAAAAATGCGTCGTCATCAACGTTACGATGCCGAACAAATTGTCCGTGACAGCGGGCGAGCGGCAGGTGATGAACCGCTGTTTGGTCCGGTACTCAATATCAAGGTATTTGATTACCAACTGGATATTCCTGATGTTCAGGCGCAAACCCATACCCTGGCAACCGGTCCGGTTAATGACCTTGAACTGGCCCTGTTCCCGGATGTACACGGTGATTTGAGTATTGAGATCCTCGCCAATAAACAGCGTTACGATGAGCCAACGTTAATCCAGCATGCTGAACGCCTGAAAATGCTGATTGCCCAGTTCGCCGCGGATCCGGCGCTGTTGTGCGGCGATGTCGATATTATGCTGCCAGGTGAGTATGCGCAGCTGGCGCAGCTCAACGCCACTCAGGTTGAGATTCCAGAAACCACGCTTAGCGCGCTGGTGGCAGAACAAGCGGCAAAAACACCGGATGCTCCGGCGCTGGCAGATGCGCGTTACCTGTTCAGCTATCGGGAAATGCGCGAGCAGGTGGTGGCGCTGGCGAATCTGCTGCGTGAGCGCGGCGTTAAACCAGGGGACAGCGTGGCGGTGGCACTACCGCGCTCGGTCTTTTTGACCCTGGCACTCCATGCGATAGTTGAAGCTGGAGCGGCCTGGCTACCGCTGGATACCGGCTATCCGGACGATCGCCTGAAAATGATGCTGGAAGATGCGCGTCCGTCGCTGTTAATTACCACCGACGATCAACTGCCGCGCTTTAGCGATGTTCCCAATTTAACAAGCCTTTGCTATAACGCCCCGCTTACACCGCAGGGCAGTGCGCCGCTGCAACTTTCACAACCGCATCACACGGCTTATATCATCTTTACCTCTGGCTCCACCGGCAGGCCGAAAGGGGTAATGGTCGGGCAGACGGCTATCGTCAACCGCCTGCTTTGGATGCAAAATCATTATCCGCTTACAGGCGAAGATGTCGTTGCCCAAAAAACGCCGTGCAGTTTTGATGTCTCGGTGTGGGAGTTTTTCTGGCCGTTTATCGCAGGGGCAAAACTGGTGATGGCTGAACCGGAAGCGCACCGCGACCCGCTCGCTATGCAGCAATTCTTTGCCGAATATGGCGTAACGACCACGCACTTTGTGCCGTCGATGCTGGCGGCATTTGTTGCCTCGCTGACGCCGCAAACCGCTCGCCAGAGTTGCGCGACGTTGAAACAGGTTTTCTGTAGTGGTGAGGCCTTACCGGCTGATTTATGCCGCGAATGGCAACAGTTAACTGGCGCGCCGTTGCATAATCTATATGGCCCGACGGAAGCGGCGGTAGATGTCAGCTGGTATCCGGCTTTTGGCGAGGAACTGGCACAGGTGCGCGGCAGCAGTGTGCCGATTGGTTATCCGGTATGGAATACGGGTCTGCGTATTCTTGATGCGATGATGCATCCGGTGCCGCCGGGTGTGGCGGGTGATCTCTATCTCACTGGCATTCAACTGGCGCAGGGCTATCTCGGACGCCCCGATCTGACCGCCAGCCGCTTTATTGCCGATCCTTTTGCCCCAGGTGAACGGATGTACCGTACCGGAGACGTTGCCCGCTGGCTGGATAACGGCGCGGTGGAGTACCTCGGGCGCAGTGATGATCAGCTAAAAATTCGCGGGCAGCGTATCGAACTGGGCGAAATCGATCGCGTGATGCAGGCGCTGCCGGATGTCGAACAAGCCGTTACCCACGCCTGTGTGATTAACCAGGCGGCTGCCACCGGTGGTGATGCGCGTCAATTGGTGGGCTATCTGGTGTCGCAATCGGGCCTGCCGTTGGATACCAGCGCATTGCAGGCGCAGCTTCGTGAAACATTGCCACCACATATGGTACCGGTGGTTCTGCTGCAACTTCCACAGTTACCACTTAGCGCCAACGGCAAGCTGGATCGCAAAGCCTTACCGTTGCCTGAACTGAAGGCACAAGCGCCAGGGCGTGCGCCGAAAGCGGGCAGTGAAACGATTATCGCCGCGGCATTCTCGTCGTTGCTGGGGTGTGACGTGCAGGATGCCGATGCTGATTTCTTCGCGCTTGGCGGTCATTCGCTACTGGCAATGAAACTGGCAGCGCAGTTAAGTCGGCAGGTTGCCCGCCAGGTGACGCCGGGGCAAGTGATGGTCGCGTCAACTGTCGCCAAACTGGCAACGATTATTGATGCTGAAGAAGACAGCACCCGGCGTATGGGATTCGAAACCATTCTGCCGTTGCGTGAAGGTAATGGCCCGACGCTGTTTTGTTTCCATCCTGCGTCCGGTTTTGCCTGGCAGTTCAGCGTGCTCTCGCGTTATCTCGATCCACAATGGTCGATTATCGGCATTCAGTCACCGCGCCCCAATGGCCCCATGCAGACGGCGGCAAACCTGGATGAAGTCTGCGAAGCGCATCTGGCAACGTTACTTGAACAACAACCGCATGGCCCTTATTACCTGCTGGGGTATTCCCTTGGCGGTACGCTGGCGCAGGGTATTGCGGCGCGACTGCGTGCCCGTGGCGAACAGGTGGCATTTCTTGGCTTGCTGGATACCTGGCCGCCAGAAACGCAAAACTGGCAGGAAAAAGAAGCTAATGGTCTGGACCCGGAAGTGCTGGCGGAGATTAACCGCGAACGCGAGGCCTTCCTGGCAGCACAGCAGGGAAGTACTTCAACGGAGTTGTTTACCACCATTGAAGGCAACTACGCTGATGCTGTGCGCCTGCTGACGACTGCTCATAGCGTACCGTTTGACGGTAAAGCGACGCTGTTTGTTGCTGAACGCACACTTCAGGAAGGTATGAGTCCCGAACGCGCCTGGTCGCCGTGGATAGCGGAGCTGGATATCTATCGTCAGGATTGTGCGCATGTGGATATTATCTCTCCAGGGACGTTTGAAAAAATTGGGCCGATTATTCGCGCAACGCTAAACAGGTAA", 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"MSQHLPLVAAQPGIWMAEKLSELPSAWSVAHYVELTGEVDSPLLARAVVAGLAQADTLRMRFTEDNGEVWQWVDDALTFELPEIIDLRTNIDPHGTAQALMQADLQQDLRVDSGKPLVFHQLIQVADNRWYWYQRYHHLLVDGFSFPAITRQIANIYCTWLRGEPTPASPFTPFADVVEEYQQYRESEAWQRDAAFWAEQRRQLPPPASLSPAPLPGRSASADILRLKLEFTDGEFRQLATQLSGVQRTDLALALAALWLGRLCNRMDYAAGFIFMRRLGSAALTATGPVLNVLPLGIHIAAQETLPELATRLAAQLKKMRRHQRYDAEQIVRDSGRAAGDEPLFGPVLNIKVFDYQLDIPDVQAQTHTLATGPVNDLELALFPDVHGDLSIEILANKQRYDEPTLIQHAERLKMLIAQFAADPALLCGDVDIMLPGEYAQLAQLNATQVEIPETTLSALVAEQAAKTPDAPALADARYLFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTDDQLPRFSDVPNLTSLCYNAPLTPQGSAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTGEDVVAQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPQTARQSCATLKQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAQVRGSSVPIGYPVWNTGLRILDAMMHPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDNGAVEYLGRSDDQLKIRGQRIELGEIDRVMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLDTSALQAQLRETLPPHMVPVVLLQLPQLPLSANGKLDRKALPLPELKAQAPGRAPKAGSETIIAAAFSSLLGCDVQDADADFFALGGHSLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAEEDSTRRMGFETILPLREGNGPTLFCFHPASGFAWQFSVLSRYLDPQWSIIGIQSPRPNGPMQTAANLDEVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAELDIYRQDCAHVDIISPGTFEKIGPIIRATLNR", - "protein_translation_length": 1293, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0587" - ], - [ - "gene_synonym", - "ASAP:ABE-0002023" - ], - [ - "gene_synonym", - "ECK0580" - ], - [ - "gene_synonym", - "GI:16128570" - ], - [ - "gene_synonym", - "EcoGene:EG10297" - ], - [ - "gene_synonym", - "fepE" - ], - [ - "gene_synonym", - "GeneID:945180" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P26266" - ], - [ - "gene_synonym", - "NP_415119.1" - ], - [ - "gene_synonym", - "JW0579" - ] - ], - "dna_sequence": "ATGTCATCACTGAATATTAAACAGGGAAGTGACGCTCATTTTCCCGATTATCCTCTGGCGTCGCCCAGTAATAATGAAATTGATTTACTTAATCTAATCTCAGTTTTATGGCGGGCCAAAAAAACGGTCATGGCGGTCGTTTTTGCGTTTGCCTGCGCAGGCTTGCTGATCTCTTTCATCCTGCCGCAAAAATGGACCAGCGCGGCGGTTGTCACGCCTCCAGAACCTGTTCAGTGGCAAGAGTTGGAGAAATCATTCACTAAGCTTCGTGTGCTGGATCTGGATATCAAAATTGATCGTACAGAAGCATTTAACCTGTTTATCAAGAAGTTTCAGTCGGTTAGCTTGCTGGAAGAGTACCTGCGTTCATCACCTTATGTGATGGACCAATTAAAAGAGGCGAAAATCGACGAACTGGATTTGCATCGCGCAATTGTCGCATTGAGCGAAAAAATGAAAGCGGTTGATGACAATGCCAGTAAGAAAAAAGATGAACCGTCACTGTATACCTCCTGGACGCTAAGTTTTACCGCGCCAACCAGTGAAGAGGCGCAGACCGTTTTGAGCGGGTATATCGATTATATCTCTACGTTGGTGGTGAAAGAGTCGCTAGAAAACGTCCGTAATAAACTGGAGATCAAAACCCAGTTTGAAAAAGAAAAACTGGCTCAGGATCGCATTAAAACGAAAAATCAACTTGATGCAAACATTCAGCGCCTCAATTATTCACTCGACATTGCCAACGCGGCAGGAATTAAAAAGCCCGTTTACAGTAATGGTCAGGCCGTTAAAGATGACCCCGATTTTTCTATTTCTCTCGGTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCGGAACTGAACGGTGAATTACGTAATCGGCAGTATCTTGTCGAGCAATTAACAAAAGCACATGTCAACGATGTGAATTTTACGCCGTTTAAATATCAGTTAAGCCCGTCATTGCCAGTGAAAAAAGACGGTCCGGGTAAGGCGATTATTGTGATCCTTTCCGCGTTGATCGGCGGGATGGTGGCTTGTGGTGGCGTGCTGTTGCGCTATGCGATGGCATCCAGAAAACAGGATGCCATGATGGCAGACCACTTAGTTTAA", - "dna_sequence_length": 1134, - "functions": [ - "regulator of length of O-antigen component of lipopolysaccharide chains" - ], - "id": "CDS_585", - "location": [ - [ - "NC_000913", - 618254, - "+", - 1134 - ] - ], - "md5": "586eda11cb626c8be1c7c091f91dc2e9", - "parent_gene": "", - "protein_md5": "f35d1a48e0a520813cf40f9a3fe89a10", - "protein_translation": "MSSLNIKQGSDAHFPDYPLASPSNNEIDLLNLISVLWRAKKTVMAVVFAFACAGLLISFILPQKWTSAAVVTPPEPVQWQELEKSFTKLRVLDLDIKIDRTEAFNLFIKKFQSVSLLEEYLRSSPYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNASKKKDEPSLYTSWTLSFTAPTSEEAQTVLSGYIDYISTLVVKESLENVRNKLEIKTQFEKEKLAQDRIKTKNQLDANIQRLNYSLDIANAAGIKKPVYSNGQAVKDDPDFSISLGADGIERKLEIEKAVTDVAELNGELRNRQYLVEQLTKAHVNDVNFTPFKYQLSPSLPVKKDGPGKAIIVILSALIGGMVACGGVLLRYAMASRKQDAMMADHLV", - "protein_translation_length": 377, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10295" - ], - [ - "gene_synonym", - "ASAP:ABE-0002025" - ], - [ - "gene_synonym", - "GeneID:945201" - ], - [ - "gene_synonym", - "b0588" - ], - [ - "gene_synonym", - "ECK0581" - ], - [ - "gene_synonym", - "GI:16128571" - ], - [ - "gene_synonym", - "fepC" - ], - [ - "gene_synonym", - "JW0580" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23878" - ], - [ - "gene_synonym", - "NP_415120.1" - ] - ], - "dna_sequence": "ATGACCGAATCAGTAGCCCGTTTGCGCGGCGAACAGTTAACCCTGGGATATGGCAAATATACCGTTGCGGAAAATCTGACTGTAGAAATACCTGATGGTCACTTCACGGCAATTATCGGGCCAAATGGCTGCGGTAAATCCACGTTACTGCGTACCTTAAGCCGCCTGATGACGCCTGCTCATGGGCATGTCTGGCTGGATGGCGAGCACATTCAACATTACGCCAGTAAAGAGGTTGCACGCCGGATTGGTCTGTTGGCGCAAAATGCTACCACGCCGGGCGATATCACCGTGCAGGAGCTGGTGGCGCGTGGACGTTATCCGCATCAACCGCTGTTTACCCGCTGGCGCAAAGAGGATGAAGAAGCGGTAACGAAAGCAATGCAGGCCACGGGAATAACTCATCTGGCAGATCAAAGCGTGGATACCCTTTCTGGCGGACAACGCCAGCGAGCGTGGATCGCGATGGTGCTGGCCCAGGAAACGGCAATTATGCTGCTCGACGAACCCACGACCTGGCTGGATATCAGTCATCAGATTGATTTGCTGGAGTTGTTAAGCGAACTGAACCGCGAAAAAGGCTATACCCTGGCGGCGGTGCTGCACGATCTTAATCAGGCCTGTCGTTACGCCAGCCATTTGATTGCATTGCGGGAAGGGAAAATTGTTGCTCAGGGAGCGCCGAAGGAGATTGTCACTGCTGAACTGATTGAGCGCATTTATGGTCTGCGCTGCATGATCATTGACGATCCAGTTGCCGGAACGCCGCTTGTGGTGCCGCTCGGACGAACGGCACCTTCAACCGCAAATAGTTAA", - "dna_sequence_length": 816, - "functions": [ - "ferrienterobactin ABC transporter ATPase" - ], - "id": "CDS_586", - "location": [ - [ - "NC_000913", - 620199, - "-", - 816 - ] - ], - "md5": "9da7ba0dfb9f87db123487957821e057", - "parent_gene": "", - "protein_md5": "791f92ae0a9d676a1175a548eee6ddb5", - "protein_translation": "MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVTAELIERIYGLRCMIIDDPVAGTPLVVPLGRTAPSTANS", - "protein_translation_length": 271, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002027" - ], - [ - "gene_synonym", - "b0589" - ], - [ - "gene_synonym", - "GeneID:945209" - ], - [ - "gene_synonym", - "ECK0582" - ], - [ - "gene_synonym", - "GI:16128572" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23877" - ], - [ - "gene_synonym", - "NP_415121.1" - ], - [ - "gene_synonym", - "JW0581" - ], - [ - "gene_synonym", - "fepG" - ], - [ - "gene_synonym", - "EcoGene:EG10298" - ] - ], - "dna_sequence": "ATGATTTACGTCTCTCGCCGATTACTCATCACCTGTTTGCTGCTGGTTTCCGCCTGTGTGGTTGCAGGTATCTGGGGATTACGCAGCGGTGCCGTCACGCTGGAAACCTCGCAGGTATTCGCCGCGCTGATGGGCGATGCGCCGCGCAGTATGACGATGGTGGTCACCGAATGGCGTTTACCACGCGTGCTGATGGCGCTGTTGATTGGCGCAGCACTGGGCGTCAGTGGCGCGATTTTTCAGTCGCTGATGCGTAACCCGCTCGGCAGCCCTGACGTAATGGGCTTTAACACCGGGGCGTGGAGCGGCGTGCTGGTGGCGATGGTGCTGTTTGGTCAGGACCTGACGGCTATCGCGCTGTCAGCAATGGTGGGCGGCATTGTCACTTCGCTGCTGGTCTGGCTGCTCGCCTGGCGCAACGGCATCGACACCTTTCGGTTGATTATTATCGGTATCGGCGTTCGCGCCATGCTGGTGGCCTTTAATACCTGGCTGTTGCTGAAAGCGTCTTTAGAAACGGCGCTAACAGCAGGTTTGTGGAATGCCGGATCGCTCAACGGCCTGACGTGGGCAAAAACCTCGCCTTCCGCACCCATCATTATATTGATGCTCATTGCCGCCGCCTTACTGGTACGCCGGATGCGCTTGCTGGAAATGGGCGATGATACCGCGTGTGCGCTGGGCGTCAGCGTCGAACGTTCGCGTCTGTTAATGATGCTGGTTGCAGTGGTGCTTACCGCTGCGGCAACAGCGCTTGCCGGGCCGATTTCCTTTATTGCTTTAGTCGCACCGCACATTGCCCGACGCATTAGCGGCACCGCTCGCTGGGGGCTAACCCAGGCGGCGCTATGCGGGGCGCTGTTACTGCTGGCGGCCGATCTCTGCGCCCAACAACTGTTTATGCCGTATCAACTTCCGGTTGGCGTCGTTACCGTCAGCCTCGGCGGTATTTACCTTATCGTCTTGTTAATTCAGGAGTCTCGCAAAAAATGA", - "dna_sequence_length": 993, - "functions": [ - "iron-enterobactin ABC transporter permease" - ], - "id": "CDS_587", - "location": [ - [ - "NC_000913", - 621188, - "-", - 993 - ] - ], - "md5": "1f868c63de79e6f47671bac5c09c117b", - "parent_gene": "", - "protein_md5": "702a3b9bbbd18f771ced73b7cfd3fc9e", - "protein_translation": "MIYVSRRLLITCLLLVSACVVAGIWGLRSGAVTLETSQVFAALMGDAPRSMTMVVTEWRLPRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWSGVLVAMVLFGQDLTAIALSAMVGGIVTSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVAFNTWLLLKASLETALTAGLWNAGSLNGLTWAKTSPSAPIIILMLIAAALLVRRMRLLEMGDDTACALGVSVERSRLLMMLVAVVLTAAATALAGPISFIALVAPHIARRISGTARWGLTQAALCGALLLLAADLCAQQLFMPYQLPVGVVTVSLGGIYLIVLLIQESRKK", - "protein_translation_length": 330, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0590" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23876" - ], - [ - "gene_synonym", - "ASAP:ABE-0002031" - ], - [ - "gene_synonym", - "GeneID:945214" - ], - [ - "gene_synonym", - "NP_415122.1" - ], - [ - "gene_synonym", - "GI:16128573" - ], - [ - "gene_synonym", - "EcoGene:EG10296" - ], - [ - "gene_synonym", - "ECK0583" - ], - [ - "gene_synonym", - "JW0582" - ], - [ - "gene_synonym", - "fepD" - ] - ], - "dna_sequence": "ATGTCTGGTTCTGTTGCCGTGACACGCGCCATTGCCGTGCCCGGATTGCTGTTATTACTGATTATCGCGACGGCATTAAGCCTGCTCATTGGGGCAAAATCACTCCCCGCTTCCGTAGTGCTGGAGGCCTTCTCCGGCACCTGCCAGAGCGCCGACTGCACCATCGTGCTCGACGCGCGGCTGCCGCGTACCCTTGCCGGTTTACTGGCAGGCGGCGCGCTTGGCCTTGCCGGGGCGTTAATGCAAACCCTCACCCGAAACCCACTTGCCGACCCCGGCTTGCTTGGCGTGAACGCCGGAGCCAGCTTTGCCATTGTGCTGGGTGCGGCGCTGTTTGGTTACTCTTCCGCGCAGGAACAACTGGCGATGGCCTTCGCCGGGGCGCTGGTGGCCTCATTGATTGTTGCCTTTACCGGCAGTCAGGGCGGCGGGCAGTTAAGTCCGGTGCGTTTAACCCTGGCGGGCGTGGCGCTGGCGGCGGTGCTGGAAGGACTGACCAGCGGCATCGCCCTGCTTAATCCTGACGTCTACGATCAGTTGCGTTTCTGGCAAGCCGGTTCGCTGGATATTCGCAATCTACATACCTTAAAAGTGGTGCTGATCCCGGTGCTGATCGCCGGAGCAACTGCGCTATTACTGAGTCGCGCGCTGAACAGTTTGAGCCTCGGCAGCGACACCGCGACGGCGCTGGGCAGTCGCGTGGCGCGCACACAGTTGATTGGTCTGCTGGCGATTACCGTGCTTTGTGGTAGTGCGACGGCAATAGTTGGCCCGATTGCCTTTATTGGCCTGATGATGCCGCATATGGCGCGTTGGCTGGTGGGTGCCGATCATCGCTGGTCGCTGCCCGTCACGCTACTTGCTACCCCTGCCCTGCTGCTGTTTGCCGATATCATCGGGCGGGTGATTGTGCCCGGCGAACTGCGCGTTTCTGTGGTCAGTGCGTTTATTGGTGCACCGGTGCTGATCTTCCTCGTGCGACGTAAAACGCGAGGTGGTGCATGA", - "dna_sequence_length": 1005, - "functions": [ - "ferrienterobactin ABC transporter permease" - ], - "id": "CDS_588", - "location": [ - [ - "NC_000913", - 622189, - "-", - 1005 - ] - ], - "md5": "9e30c39a0b55e3fa339a63cabaa83aee", - "parent_gene": "", - "protein_md5": "a7ee28a873f9a0ac50b351dd1d77370b", - "protein_translation": "MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAFSGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAIVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA", - "protein_translation_length": 334, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0591" - ], - [ - "gene_synonym", - "ASAP:ABE-0002036" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24077" - ], - [ - "gene_synonym", - "ECK0584" - ], - [ - "gene_synonym", - "NP_415123.1" - ], - [ - "gene_synonym", - "EcoGene:EG11104" - ], - [ - "gene_synonym", - "entS" - ], - [ - "gene_synonym", - "GI:16128574" - ], - [ - "gene_synonym", - "ybdA" - ], - [ - "gene_synonym", - "JW0583" - ], - [ - "gene_synonym", - "GeneID:946268" - ] - ], - "dna_sequence": "ATGAATAAACAATCCTGGCTGCTTAACCTCAGCCTGTTGAAAACGCACCCGGCGTTTCGCGCAGTATTCCTCGCTCGTTTCATCTCAATTGTGTCTCTGGGTTTGCTCGGCGTCGCGGTGCCGGTGCAGATCCAGATGATGACACATTCCACCTGGCAGGTGGGGCTTTCGGTGACGCTGACCGGCGGCGCGATGTTTGTTGGCCTGATGGTCGGCGGTGTGCTGGCGGATCGCTATGAGCGCAAAAAAGTGATTTTGCTGGCGCGCGGCACCTGTGGCATTGGCTTCATTGGACTGTGCCTTAATGCACTGCTGCCGGAGCCGTCATTGCTGGCAATCTATTTACTTGGTTTATGGGATGGTTTTTTCGCATCGCTTGGCGTTACGGCGCTATTGGCGGCGACACCAGCACTGGTAGGGCGTGAAAACTTAATGCAGGCCGGGGCGATCACCATGTTGACCGTGCGTCTGGGGTCGGTGATTTCGCCCATGATTGGCGGTTTATTGCTGGCGACCGGTGGCGTAGCCTGGAACTACGGGCTGGCGGCGGCGGGCACGTTTATTACCTTGCTACCGTTGTTAAGCCTTCCGGCGTTGCCACCGCCACCGCAGCCGCGTGAGCATCCGTTGAAATCATTACTGGCAGGATTTCGTTTTCTGCTTGCCAGCCCGCTGGTGGGCGGGATTGCGCTGCTGGGTGGTTTATTGACGATGGCGAGCGCGGTGCGGGTACTGTATCCGGCGCTGGCTGACAACTGGCAGATGTCAGCGGCACAGATTGGTTTTCTCTACGCGGCGATCCCGCTCGGCGCGGCTATTGGTGCGTTAACCAGCGGGAAGCTGGCACATAGTGCGCGACCAGGGTTATTGATGCTGCTCTCCACGCTGGGATCGTTCCTCGCCATTGGTCTGTTTGGCCTGATGCCGATGTGGATTTTAGGCGTGGTTTGTCTGGCGCTGTTCGGCTGGTTGAGTGCGGTCAGCTCGTTGCTGCAATACACAATGCTGCAAACGCAAACCCCGGAAGCGATGTTAGGGCGGATTAACGGTTTGTGGACGGCGCAGAACGTGACGGGCGATGCCATAGGCGCGGCGCTGCTGGGTGGTTTGGGCGCGATGATGACACCGGTTGCTTCCGCAAGCGCGAGCGGTTTTGGTTTGTTGATTATCGGCGTGTTGTTATTGCTGGTGCTGGTGGAGTTGCGACATTTTCGCCAGACGCCGCCGCAGGTGACAGCGTCCGACAGTTAA", - "dna_sequence_length": 1251, - "functions": [ - "enterobactin exporter, iron-regulated" - ], - "id": "CDS_589", - "location": [ - [ - "NC_000913", - 622300, - "+", - 1251 - ] - ], - "md5": "ff16ab9c108df7c1a266d10eb0e58653", - "parent_gene": "", - "protein_md5": "3dfaab2794194c5ef8e7c06bb2842a59", - "protein_translation": "MNKQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQIQMMTHSTWQVGLSVTLTGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLNALLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMIGGLLLATGGVAWNYGLAAAGTFITLLPLLSLPALPPPPQPREHPLKSLLAGFRFLLASPLVGGIALLGGLLTMASAVRVLYPALADNWQMSAAQIGFLYAAIPLGAAIGALTSGKLAHSARPGLLMLLSTLGSFLAIGLFGLMPMWILGVVCLALFGWLSAVSSLLQYTMLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLVELRHFRQTPPQVTASDS", - "protein_translation_length": 416, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0592" - ], - [ - "gene_synonym", - "GeneID:947538" - ], - [ - "gene_synonym", - "ECK0585" - ], - [ - "gene_synonym", - "ASAP:ABE-0002038" - ], - [ - "gene_synonym", - "NP_415124.1" - ], - [ - "gene_synonym", - "EcoGene:EG10294" - ], - [ - "gene_synonym", - "GI:16128575" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEL6" - ], - [ - "gene_synonym", - "fepB" - ], - [ - "gene_synonym", - "JW0584" - ] - ], - "dna_sequence": "GTGAGACTCGCCCCGCTCTACCGCAACGCCCTTCTATTAACAGGACTTTTGCTTTCAGGAATAGCCGCAGTTCAGGCCGCTGACTGGCCGCGTCAGATTACTGACAGCCGTGGCACACATACACTGGAAAGCCAGCCGCAGCGTATTGTTTCCACCAGCGTCACCCTGACCGGCTCACTGCTGGCGATTGATGCTCCGGTGATCGCCAGCGGCGCGACCACGCCGAATAACCGCGTCGCGGATGACCAGGGCTTTTTACGCCAGTGGAGCAAGGTGGCGAAAGAACGCAAACTGCAACGGCTCTATATCGGCGAACCGAGCGCCGAAGCCGTTGCCGCGCAAATGCCGGATCTGATTTTAATTAGCGCAACCGGCGGGGATTCGGCGCTGGCACTGTATGATCAGCTTTCCACCATCGCCCCGACATTAATCATCAATTACGACGACAAAAGCTGGCAGTCGCTGTTAACGCAACTTGGCGAAATTACCGGGCATGAGAAACAAGCGGCAGAGCGGATTGCGCAGTTTGATAAGCAACTGGCGGCGGCGAAAGAGCAAATCAAATTACCGCCGCAGCCGGTCACTGCCATTGTCTATACTGCCGCTGCACACAGTGCCAATCTCTGGACGCCAGAATCAGCACAAGGGCAGATGCTGGAACAACTCGGCTTTACGCTGGCGAAGTTACCCGCAGGGTTAAATGCCAGCCAAAGTCAGGGTAAACGCCATGACATCATTCAGCTTGGTGGGGAAAATCTGGCTGCAGGGTTAAATGGCGAGTCACTATTCCTGTTCGCCGGTGATCAGAAAGATGCCGATGCTATTTATGCTAATCCGCTGCTCGCGCACCTGCCTGCAGTACAAAACAAGCAGGTTTATGCGCTGGGAACCGAGACGTTCCGTCTGGATTACTACAGCGCCATGCAAGTGCTGGATAGGCTTAAGGCGCTGTTTTAA", - "dna_sequence_length": 957, - "functions": [ - "ferrienterobactin ABC transporter periplasmic binding protein" - ], - "id": "CDS_590", - "location": [ - [ - "NC_000913", - 624510, - "-", - 957 - ] - ], - "md5": "547438e282f6e67219a1ed88d2c530ce", - "parent_gene": "", - "protein_md5": "4349650b1b24c1481de695cff6e8a762", - "protein_translation": "MRLAPLYRNALLLTGLLLSGIAAVQAADWPRQITDSRGTHTLESQPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLYIGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLGEITGHEKQAAERIAQFDKQLAAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQMLEQLGFTLAKLPAGLNASQSQGKRHDIIQLGGENLAAGLNGESLFLFAGDQKDADAIYANPLLAHLPAVQNKQVYALGTETFRLDYYSAMQVLDRLKALF", - "protein_translation_length": 318, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "entC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEJ2" - ], - [ - "gene_synonym", - "EcoGene:EG10261" - ], - [ - "gene_synonym", - "GeneID:945511" - ], - [ - "gene_synonym", - "ECK0586" - ], - [ - "gene_synonym", - "b0593" - ], - [ - "gene_synonym", - "fepF" - ], - [ - "gene_synonym", - "GI:16128576" - ], - [ - "gene_synonym", - "ASAP:ABE-0002047" - ], - [ - "gene_synonym", - "NP_415125.1" - ], - [ - "gene_synonym", - "JW0585" - ] - ], - "dna_sequence": "ATGGATACGTCACTGGCTGAGGAAGTACAGCAGACCATGGCAACACTTGCGCCCAATCGCTTTTTCTTTATGTCGCCGTACCGCAGTTTTACGACGTCAGGATGTTTCGCCCGCTTCGATGAACCGGCTGTGAACGGGGATTCGCCCGACAGTCCCTTCCAGCAAAAACTCGCCGCGCTGTTTGCCGATGCCAAAGCGCAGGGCATCAAAAATCCGGTGATGGTCGGGGCGATTCCCTTCGATCCACGTCAGCCTTCGTCGCTGTATATTCCTGAATCCTGGCAGTCGTTCTCCCGTCAGGAAAAACAAGCTTCCGCACGCCGTTTCACCCGCAGCCAGTCGCTGAATGTGGTGGAACGCCAGGCAATTCCGGAGCAAACCACGTTTGAACAGATGGTTGCCCGCGCCGCCGCACTTACCGCCACGCCGCAGGTCGACAAAGTGGTGTTGTCACGGTTGATTGATATCACCACTGACGCCGCCATTGATAGTGGCGTATTGCTGGAACGGTTGATTGCGCAAAACCCGGTTAGTTACAACTTCCATGTTCCGCTGGCTGATGGTGGCGTCCTGCTGGGGGCCAGCCCGGAACTGCTGCTACGTAAAGACGGCGAGCGTTTTAGCTCCATTCCGTTAGCCGGTTCCGCGCGTCGTCAGCCGGATGAAGTGCTCGATCGCGAAGCAGGTAATCGTCTGCTGGCGTCAGAAAAAGATCGCCATGAACATGAACTGGTGACTCAGGCGATGAAAGAGGTACTGCGCGAACGCAGTAGTGAGTTACACGTTCCTTCTTCTCCACAGCTGATCACCACGCCGACGCTGTGGCATCTCGCAACTCCCTTTGAAGGTAAAGCGAATTCGCAAGAAAACGCACTGACTCTGGCCTGTCTGCTGCATCCGACCCCCGCGCTGAGCGGTTTCCCGCATCAGGCCGCGACCCAGGTTATTGCTGAACTGGAACCGTTCGACCGCGAACTGTTTGGCGGCATTGTGGGTTGGTGTGACAGCGAAGGTAACGGCGAATGGGTGGTGACCATCCGCTGCGCGAAGCTGCGGGAAAATCAGGTGCGTCTGTTTGCCGGAGCGGGGATTGTGCCTGCGTCGTCACCGTTGGGTGAGTGGCGCGAAACAGGCGTCAAACTTTCTACCATGTTGAACGTTTTTGGATTGCATTAA", - "dna_sequence_length": 1176, - "functions": [ - "isochorismate synthase 1" - ], - "id": "CDS_591", - "location": [ - [ - "NC_000913", - 624885, - "+", - 1176 - ] - ], - "md5": "e36a18d3700edc9bb069bae236985569", - "parent_gene": "", - "protein_md5": "5b883d2a2c2e9dc076f0d304176c5452", - "protein_translation": "MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAVNGDSPDSPFQQKLAALFADAKAQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEKQASARRFTRSQSLNVVERQAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDAAIDSGVLLERLIAQNPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARRQPDEVLDREAGNRLLASEKDRHEHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWHLATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCAKLRENQVRLFAGAGIVPASSPLGEWRETGVKLSTMLNVFGLH", - "protein_translation_length": 391, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415126.1" - ], - [ - "gene_synonym", - "entE" - ], - [ - "gene_synonym", - "b0594" - ], - [ - "gene_synonym", - "ECK0587" - ], - [ - "gene_synonym", - "GeneID:947426" - ], - [ - "gene_synonym", - "GI:16128577" - ], - [ - "gene_synonym", - "ASAP:ABE-0002049" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10378" - ], - [ - "gene_synonym", - "JW0586" - ], - [ - "gene_synonym", - "EcoGene:EG10263" - ] - ], - "dna_sequence": "ATGAGCATTCCATTCACCCGCTGGCCGGAAGAGTTTGCCCGTCGCTATCGGGAAAAAGGCTACTGGCAGGATTTGCCGCTGACCGACATTCTGACGCGACATGCTGCGAGTGACAGCATCGCGGTTATCGACGGCGAGCGACAGTTGAGTTATCGGGAGCTGAATCAGGCGGCGGATAACCTCGCGTGTAGTTTACGCCGTCAGGGCATTAAACCTGGTGAAACCGCGCTGGTACAACTGGGTAACGTCGCTGAATTGTATATTACCTTTTTCGCGCTGCTGAAACTGGGCGTTGCGCCGGTGCTGGCGTTGTTCAGCCATCAGCGTAGTGAACTGAACGCCTATGCCAGCCAGATTGAACCCGCATTGCTGATTGCCGATCGCCAACATGCGCTGTTTAGCGGGGATGATTTCCTCAATACTTTCGTCACAGAACATTCCTCCATTCGCGTGGTGCAACTGCTCAACGACAGCGGTGAGCATAACTTGCAGGATGCGATTAACCATCCGGCTGAGGATTTTACTGCCACGCCATCACCTGCTGATGAAGTGGCCTATTTCCAGCTTTCCGGTGGCACCACCGGCACACCGAAACTGATCCCGCGCACTCATAACGACTACTACTACAGCGTGCGTCGTAGCGTCGAGATTTGTCAGTTCACACAACAGACACGCTACCTGTGCGCGATCCCGGCGGCTCATAACTACGCCATGAGTTCGCCAGGATCGCTGGGCGTCTTTCTTGCCGGAGGAACGGTTGTTCTGGCGGCCGATCCCAGCGCCACGCTCTGTTTCCCATTGATTGAAAAACATCAGGTTAACGTTACCGCGCTGGTGCCACCCGCAGTCAGCCTGTGGTTGCAGGCGCTGATCGAAGGCGAAAGCCGGGCGCAGCTTGCCTCGCTGAAACTGTTACAGGTCGGCGGCGCACGTCTTTCTGCCACCCTTGCGGCGCGTATTCCCGCTGAGATTGGCTGTCAGTTGCAGCAGGTGTTTGGCATGGCGGAAGGGCTGGTGAACTACACCCGACTTGATGATAGCGCGGAGAAAATTATCCATACCCAGGGTTACCCAATGTGTCCGGATGACGAAGTATGGGTTGCCGATGCCGAAGGAAATCCACTGCCGCAAGGGGAAGTCGGACGCCTGATGACGCGCGGGCCGTACACCTTCCGCGGCTATTACAAAAGTCCACAGCACAATGCCAGCGCCTTTGATGCCAACGGTTTTTACTGTTCCGGCGATCTGATCTCTATTGATCCAGAGGGTTACATCACCGTGCAGGGGCGCGAGAAAGATCAGATTAACCGTGGCGGCGAGAAGATCGCTGCCGAAGAGATCGAAAACCTGCTGCTGCGCCACCCGGCGGTGATCTACGCCGCACTGGTGAGCATGGAAGATGAGCTGATGGGCGAAAAAAGCTGCGCTTATCTGGTGGTAAAAGAGCCGCTGCGCGCGGTGCAGGTGCGTCGTTTCCTGCGTGAACAGGGTATTGCCGAATTTAAATTACCGGATCGCGTGGAGTGTGTGGATTCACTTCCGCTGACGGCGGTCGGGAAAGTCGATAAAAAACAATTACGTCAGTGGCTGGCGTCACGCGCATCAGCCTGA", - "dna_sequence_length": 1611, - "functions": [ - "2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex" - ], - "id": "CDS_592", - "location": [ - [ - "NC_000913", - 626070, - "+", - 1611 - ] - ], - "md5": "20c1080d2268ef8056548a86bc28790a", - "parent_gene": "", - "protein_md5": "c4380653142ac6be1c2307929583d88d", - "protein_translation": "MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASDSIAVIDGERQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVLALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGEHNLQDAINHPAEDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENLLLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRASA", - "protein_translation_length": 536, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "entB" - ], - [ - "gene_synonym", - "b0595" - ], - [ - "gene_synonym", - "ECK0588" - ], - [ - "gene_synonym", - "entG" - ], - [ - "gene_synonym", - "NP_415127.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002052" - ], - [ - "gene_synonym", - "GI:16128578" - ], - [ - "gene_synonym", - "GeneID:946178" - ], - [ - "gene_synonym", - "EcoGene:EG10260" - ], - [ - "gene_synonym", - "JW0587" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADI4" - ] - ], - "dna_sequence": "ATGGCTATTCCAAAATTACAGGCTTACGCACTGCCGGAGTCTCACGATATTCCGCAGAATAAAGTTGACTGGGCCTTTGAACCGCAACGTGCCGCGTTGTTAATCCATGATATGCAGGACTATTTTGTCAGCTTCTGGGGCGAGAACTGCCCGATGATGGAGCAGGTGATCGCGAATATTGCTGCGCTGCGCGACTACTGCAAACAGCACAATATCCCGGTTTATTACACCGCCCAGCCGAAAGAGCAGAGCGATGAAGATCGGGCGCTGTTGAATGATATGTGGGGGCCGGGCCTGACCCGCTCGCCGGAACAGCAAAAGGTGGTGGATCGCCTGACGCCAGATGCCGACGACACGGTGCTGGTGAAGTGGCGCTACAGCGCGTTTCATCGTTCTCCGCTGGAGCAAATGCTGAAAGAGAGTGGACGTAACCAGCTGATTATTACCGGGGTATATGCCCACATTGGCTGTATGACCACCGCAACCGACGCATTTATGCGCGATATTAAACCGTTTATGGTGGCGGATGCGCTGGCCGATTTCAGCCGTGACGAGCATTTGATGTCGCTGAAATATGTGGCCGGACGTTCTGGCCGGGTGGTGATGACTGAAGAATTACTGCCAGCACCTATCCCCGCCAGCAAAGCGGCGCTGCGTGAGGTGATCCTGCCGTTGCTGGACGAGTCCGATGAACCGTTCGATGACGACAACCTGATCGACTACGGTCTGGATTCGGTGCGCATGATGGCGCTGGCGGCGCGCTGGCGCAAAGTGCATGGTGATATCGACTTTGTCATGCTGGCGAAAAACCCGACCATCGACGCCTGGTGGAAGCTACTCTCCCGCGAGGTGAAATAA", - "dna_sequence_length": 858, - "functions": [ - "isochorismatase" - ], - "id": "CDS_593", - "location": [ - [ - "NC_000913", - 627694, - "+", - 858 - ] - ], - "md5": "67e94de3b215a8a9761d08ccfdefe248", - "parent_gene": "", - "protein_md5": "d86cbc59170ea19583ca269d1d94c5c1", - "protein_translation": "MAIPKLQAYALPESHDIPQNKVDWAFEPQRAALLIHDMQDYFVSFWGENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRSPEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALADFSRDEHLMSLKYVAGRSGRVVMTEELLPAPIPASKAALREVILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAWWKLLSREVK", - "protein_translation_length": 285, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "entA" - ], - [ - "gene_synonym", - "EcoGene:EG10259" - ], - [ - "gene_synonym", - "NP_415128.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002054" - ], - [ - "gene_synonym", - "b0596" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15047" - ], - [ - "gene_synonym", - "JW0588" - ], - [ - "gene_synonym", - "GeneID:945284" - ], - [ - "gene_synonym", - "GI:16128579" - ], - [ - "gene_synonym", - "ECK0589" - ] - ], - "dna_sequence": "ATGGATTTCAGCGGTAAAAATGTCTGGGTAACCGGCGCAGGTAAAGGTATCGGCTACGCCACGGCGCTGGCGTTTGTTGAGGCGGGAGCGAAAGTTACAGGTTTTGATCAAGCGTTCACTCAGGAGCAATATCCCTTTGCGACCGAAGTGATGGATGTTGCCGACGCTGCGCAGGTCGCGCAAGTGTGTCAGCGACTGTTAGCTGAAACGGAGCGACTGGACGCGCTGGTCAATGCGGCGGGAATTTTACGCATGGGCGCGACCGATCAGCTCAGTAAAGAGGACTGGCAGCAGACTTTTGCGGTTAACGTCGGCGGTGCGTTTAACCTGTTCCAGCAAACCATGAACCAGTTTCGCCGTCAGCGGGGCGGGGCGATTGTCACTGTGGCGTCCGACGCCGCGCACACGCCGCGTATTGGCATGAGTGCTTATGGCGCATCGAAAGCGGCGCTGAAAAGCCTGGCGTTGAGCGTCGGGCTGGAACTGGCGGGTAGCGGCGTGCGCTGTAATGTGGTTTCGCCTGGCTCCACCGACACCGATATGCAACGCACGCTGTGGGTGAGCGATGACGCCGAAGAACAGCGTATTCGCGGCTTTGGCGAGCAGTTTAAACTCGGCATTCCGCTGGGGAAAATCGCCCGTCCACAAGAGATCGCCAACACGATTTTGTTCCTCGCCTCTGACCTCGCCAGCCATATTACCCTACAGGATATTGTGGTCGATGGCGGCTCAACGCTGGGGGCATAA", - "dna_sequence_length": 747, - "functions": [ - "2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase" - ], - "id": "CDS_594", - "location": [ - [ - "NC_000913", - 628551, - "+", - 747 - ] - ], - "md5": "400ddeb594ed9cb63c09195da3b31c44", - "parent_gene": "", - "protein_md5": "216c34eb7acfa7f37d7865ed513aaf0b", - "protein_translation": "MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDGGSTLGA", - "protein_translation_length": 248, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415129.1" - ], - [ - "gene_synonym", - "GeneID:945215" - ], - [ - "gene_synonym", - "ASAP:ABE-0002057" - ], - [ - "gene_synonym", - "b0597" - ], - [ - "gene_synonym", - "entH" - ], - [ - "gene_synonym", - "ECK0590" - ], - [ - "gene_synonym", - "EcoGene:EG11105" - ], - [ - "gene_synonym", - "JW0589" - ], - [ - "gene_synonym", - "GI:16128580" - ], - [ - "gene_synonym", - "ybdB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8Y8" - ] - ], - "dna_sequence": "ATGATCTGGAAACGCCATTTAACGCTCGACGAACTGAACGCCACCAGCGATAACACAATGGTGGCGCATCTGGGAATTGTGTATACCCGTCTGGGCGATGATGTGCTGGAAGCCGAAATGCCGGTTGATACCCGTACTCATCAGCCGTTCGGTTTACTACATGGCGGCGCGTCGGCGGCGCTGGCGGAAACGCTGGGATCGATGGCCGGATTTATGATGACCCGCGACGGACAGTGTGTGGTAGGCACAGAACTTAATGCAACACACCATCGCCCGGTGTCTGAGGGAAAGGTACGCGGCGTCTGCCAGCCGCTGCATCTTGGTCGGCAAAATCAGAGCTGGGAAATCGTCGTTTTCGATGAACAGGGGCGGCGTTGCTGCACTTGTCGGCTGGGTACGGCAGTTTTGGGATGA", - "dna_sequence_length": 414, - "functions": [ - "enterobactin synthesis proofreading thioesterase" - ], - "id": "CDS_595", - "location": [ - [ - "NC_000913", - 629300, - "+", - 414 - ] - ], - "md5": "1cc432a9a51f25ec4b959083000805b5", - "parent_gene": "", - "protein_md5": "e9b407cd402ef39d77772a144291a64a", - "protein_translation": "MIWKRHLTLDELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVCQPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVLG", - "protein_translation_length": 137, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cstA" - ], - [ - "gene_synonym", - "ASAP:ABE-0002061" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15078" - ], - [ - "gene_synonym", - "b0598" - ], - [ - "gene_synonym", - "ECK0591" - ], - [ - "gene_synonym", - "NP_415130.1" - ], - [ - "gene_synonym", - "GI:16128581" - ], - [ - "gene_synonym", - "JW0590" - ], - [ - "gene_synonym", - "ybdC" - ], - [ - "gene_synonym", - "dppG?" - ], - [ - "gene_synonym", - "EcoGene:EG10167" - ], - [ - "gene_synonym", - "GeneID:945213" - ] - ], - "dna_sequence": "ATGAACAAATCAGGGAAATACCTCGTCTGGACAGTGCTCTCTGTAATGGGAGCATTTGCTCTGGGATACATTGCTTTAAATCGTGGGGAACAGATCAACGCGCTGTGGATTGTGGTGGCGTCGGTCTGTATCTATCTGATCGCTTACCGTTTTTATGGGCTGTATATCGCCAAAAATGTGCTGGCGGTTGACCCGACGCGTATGACGCCAGCGGTGCGCCATAACGACGGGCTGGACTATGTGCCGACGGACAAGAAAGTGCTGTTCGGTCACCATTTTGCGGCCATTGCCGGAGCAGGTCCGCTGGTGGGGCCGGTACTGGCGGCGCAAATGGGCTACCTGCCGGGGATGATCTGGCTGCTCGCTGGGGTGGTTCTCGCCGGTGCGGTGCAGGATTTCATGGTGCTGTTTGTTTCTACGCGCCGTGACGGTCGCTCGCTGGGTGAGCTGGTCAAAGAAGAGATGGGGCCAACCGCCGGGGTGATTGCGCTGGTGGCCTGCTTTATGATCATGGTCATTATCCTTGCAGTGCTGGCGATGATCGTGGTGAAAGCCCTGACTCATAGCCCGTGGGGAACATATACCGTTGCGTTCACCATTCCGCTGGCGCTGTTTATGGGGATCTACCTGCGCTATCTGCGTCCGGGGCGTATTGGCGAAGTGTCGGTCATCGGTCTGGTATTCCTGATTTTCGCCATTATCTCTGGCGGCTGGGTGGCAGAAAGTCCGACCTGGGCACCGTACTTTGACTTTACCGGCGTGCAGTTGACCTGGATGCTGGTGGGTTACGGTTTTGTGGCGGCGGTGCTGCCGGTGTGGTTACTGCTGGCCCCGCGTGACTACCTCTCTACCTTCCTGAAAATCGGGACTATCGTCGGTCTGGCGGTAGGCATTTTGATTATGCGCCCGACGCTGACCATGCCTGCGCTGACCAAATTTGTCGATGGCACTGGCCCGGTATGGACCGGTAACCTGTTCCCGTTCCTGTTTATCACCATCGCCTGTGGCGCGGTGTCTGGCTTCCATGCGCTGATCTCTTCTGGGACCACGCCGAAGATGCTGGCGAACGAAGGGCAGGCGTGCTTTATCGGCTACGGTGGGATGTTAATGGAATCCTTCGTGGCGATTATGGCGCTGGTTTCCGCCTGTATCATCGATCCGGGCGTGTATTTTGCCATGAACAGCCCGATGGCGGTGCTGGCTCCGGCAGGGACGGCGGATGTGGTCGCTTCTGCCGCGCAGGTGGTGAGTAGCTGGGGCTTTAGCATTACACCAGATACGCTAAACCAGATTGCCAGCGAAGTGGGTGAACAGTCGATCATTTCCCGTGCGGGCGGTGCGCCGACGCTGGCGGTGGGGATGGCCTACATTCTGCACGGCGCGCTGGGCGGCATGATGGATGTGGCGTTCTGGTATCACTTCGCCATTTTGTTTGAAGCACTGTTTATTCTGACGGCGGTGGATGCAGGTACGCGTGCTGCGCGCTTTATGTTGCAGGATCTGCTGGGCGTGGTGTCTCCTGGCCTGAAGCGGACCGATTCACTGCCTGCTAACCTGCTGGCAACAGCGCTGTGCGTACTGGCGTGGGGCTACTTCCTCCATCAGGGCGTGGTCGATCCGCTGGGCGGCATTAACACTCTGTGGCCGCTGTTTGGTATTGCCAACCAGATGCTGGCAGGGATGGCGCTGATGCTCTGTGCCGTGGTGTTGTTCAAGATGAAACGTCAACGTTACGCCTGGGTGGCGCTGGTACCAACGGCCTGGCTGCTGATTTGTACCCTGACCGCAGGCTGGCAGAAAGCGTTTAGCCCGGATGCGAAAGTCGGCTTCCTGGCCATTGCTAATAAGTTCCAGGCAATGATCGACAGCGGCAATATTCCGTCGCAGTATACTGAGTCACAGCTGGCGCAACTGGTGTTCAACAACCGTCTGGATGCCGGGTTAACCATCTTCTTTATGGTGGTCGTGGTGGTTCTGGCACTGTTCTCGATTAAGACGGCACTTGCGGCATTGAAAGATCCGAAGCCAACGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAA", - "dna_sequence_length": 2106, - "functions": [ - "carbon starvation protein involved in peptide utilization", - "APC peptide transporter family protein" - ], - "id": "CDS_596", - "location": [ - [ - "NC_000913", - 629894, - "+", - 2106 - ] - ], - "md5": "ad972ef1db3cc84ed37b960ed13809b6", - "parent_gene": "", - "protein_md5": "b9b84a95df18925b8dd5c34717a21dad", - "protein_translation": "MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCIYLIAYRFYGLYIAKNVLAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAGVIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLALFMGIYLRYLRPGRIGEVSVIGLVFLIFAIISGGWVAESPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFAMNSPMAVLAPAGTADVVASAAQVVSSWGFSITPDTLNQIASEVGEQSIISRAGGAPTLAVGMAYILHGALGGMMDVAFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVVSPGLKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQKAFSPDAKVGFLAIANKFQAMIDSGNIPSQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLALFSIKTALAALKDPKPTAKETPYEPMPENVEEIVAQAKGAH", - "protein_translation_length": 701, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0285033" - ], - [ - "gene_synonym", - "ECK0592" - ], - [ - "gene_synonym", - "YP_588442.1" - ], - [ - "gene_synonym", - "EcoGene:EG11107" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAS9" - ], - [ - "gene_synonym", - "JW0591" - ], - [ - "gene_synonym", - "b4512" - ], - [ - "gene_synonym", - "GeneID:949021" - ], - [ - "gene_synonym", - "ybdD" - ], - [ - "gene_synonym", - "GI:94541100" - ] - ], - "dna_sequence": "ATGTTTGATTCACTGGCAAAAGCCGGAAAATATTTAGGTCAGGCGGCGAAGCTGATGATTGGTATGCCTGATTACGACAACTATGTCGAACATATGCGGGTTAACCATCCCGATCAAACGCCGATGACCTACGAAGAGTTTTTCCGTGAGCGGCAGGACGCGCGCTACGGTGGAAAAGGCGGCGCGCGCTGCTGCTAA", - "dna_sequence_length": 198, - "functions": [ - "DUF466 family protein" - ], - "id": "CDS_597", - "location": [ - [ - "NC_000913", - 632182, - "+", - 198 - ] - ], - "md5": "6ee16c62919d18423f92b2508ab0a10a", - "parent_gene": "", - "protein_md5": "95856758bc910f75b955633a0b386897", - "protein_translation": "MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTYEEFFRERQDARYGGKGGARCC", - "protein_translation_length": 65, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945212" - ], - [ - "gene_synonym", - "b0599" - ], - [ - "gene_synonym", - "ECK0593" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45579" - ], - [ - "gene_synonym", - "EcoGene:EG12692" - ], - [ - "gene_synonym", - "ybdH" - ], - [ - "gene_synonym", - "NP_415132.1" - ], - [ - "gene_synonym", - "GI:16128582" - ], - [ - "gene_synonym", - "JW0592" - ], - [ - "gene_synonym", - "ASAP:ABE-0002065" - ] - ], - "dna_sequence": "ATGCCTCACAATCCTATCCGCGTGGTCGTCGGCCCGGCTAACTACTTTTCACATCCAGGAAGTTTCAATCACCTGCACGATTTTTTCACTGATGAACAACTTTCTCGCGCGGTGTGGATCTACGGCAAACGCGCCATTGCTGCGGCGCAAACCAAACTTCCGCCAGCGTTTGGACTGCCAGGGGCAAAGCATATTTTGTTTCGCGGTCATTGCAGCGAAAGCGATGTACAACAACTGGCGGCTGAGTCCGGTGACGACCGCAGCGTGGTGATTGGCGTCGGTGGCGGTGCACTGCTCGACACCGCGAAAGCCCTCGCCCGCCGTCTCGGTCTGCCGTTTGTTGCCGTTCCGACGATCGCCGCCACCTGCGCCGCCTGGACACCGCTCTCCGTCTGGTATAATGATGCCGGACAGGCGCTGCATTATGAGATTTTCGACGACGCCAATTTTATGGTGCTGGTGGAACCGGAGATTATCCTCAATGCACCGCAACAATATCTGCTGGCGGGGATCGGTGACACGCTGGCGAAATGGTATGAAGCGGTGGTGCTGGCTCCGCAACCAGAAACGTTGCCGCTAACCGTGCGACTGGGGATCAATAATGCGCAAGCCATTCGCGACGTCTTGTTAAACAGTAGCGAACAGGCGCTGAGCGATCAGCAAAATCAACAGTTAACGCAATCATTTTGCGATGTGGTGGATGCTATTATTGCTGGTGGTGGGATGGTTGGTGGTCTGGGCGATCGTTTTACGCGTGTGGCGGCAGCTCATGCCGTGCATAACGGTCTGACCGTGCTGCCGCAAACCGAGAAGTTTCTCCACGGCACCAAAGTCGCCTACGGAATTCTGGTGCAAAGCGCCTTGCTGGGTCAGGATGATGTGCTGGCGCAATTAACTGGAGCGTATCAGCGTTTTCATCTGCCGACTACACTGGCGGAGCTGGAAGTGGATATCAATAATCAGGCGGAGATCGACAAAGTGATTGCCCACACCCTGCGTCCGGTGGAGTCCATTCATTACCTGCCAGTCACGCTGACACCAGATACGTTGCGTGCAGCGTTCAAAAAAGTGGAATCGTTTAAAGCCTGA", - "dna_sequence_length": 1089, - "functions": [ - "putative oxidoreductase" - ], - "id": "CDS_598", - "location": [ - [ - "NC_000913", - 633477, - "-", - 1089 - ] - ], - "md5": "d8113596c9b0e77d284488ead3ba92eb", - "parent_gene": "", - "protein_md5": "ef8121bd7f52b806d5a10c194daf301a", - "protein_translation": "MPHNPIRVVVGPANYFSHPGSFNHLHDFFTDEQLSRAVWIYGKRAIAAAQTKLPPAFGLPGAKHILFRGHCSESDVQQLAAESGDDRSVVIGVGGGALLDTAKALARRLGLPFVAVPTIAATCAAWTPLSVWYNDAGQALHYEIFDDANFMVLVEPEIILNAPQQYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINNAQAIRDVLLNSSEQALSDQQNQQLTQSFCDVVDAIIAGGGMVGGLGDRFTRVAAAHAVHNGLTVLPQTEKFLHGTKVAYGILVQSALLGQDDVLAQLTGAYQRFHLPTTLAELEVDINNQAEIDKVIAHTLRPVESIHYLPVTLTPDTLRAAFKKVESFKA", - "protein_translation_length": 362, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002069" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77806" - ], - [ - "gene_synonym", - "GeneID:945211" - ], - [ - "gene_synonym", - "EcoGene:EG13531" - ], - [ - "gene_synonym", - "ECK0594" - ], - [ - "gene_synonym", - "b0600" - ], - [ - "gene_synonym", - "ybdL" - ], - [ - "gene_synonym", - "JW0593" - ], - [ - "gene_synonym", - "GI:16128583" - ], - [ - "gene_synonym", - "NP_415133.1" - ] - ], - "dna_sequence": "ATGACAAATAACCCTCTGATTCCACAAAGCAAACTTCCACAACTTGGCACCACTATTTTCACCCAGATGAGCGCGCTGGCGCAGCAACACCAGGCGATTAACCTGTCGCAAGGCTTTCCTGATTTTGATGGTCCGCGCTATTTACAGGAGCGGCTGGCGCACCACGTTGCACAGGGGGCAAACCAATACGCGCCCATGACCGGCGTGCAGGCCTTGCGCGAGGCGATTGCTCAGAAAACGGAACGTTTGTATGGCTATCAACCAGATGCCGATAGCGATATCACCGTAACGGCAGGGGCGACGGAAGCGTTATACGCGGCGATTACCGCACTGGTGCGCAATGGCGATGAAGTGATTTGTTTTGATCCCAGCTATGACAGTTACGCCCCCGCCATCGCGCTTTCTGGGGGAATAGTGAAGCGTATGGCACTGCAACCACCGCATTTTCGCGTTGACTGGCAGGAATTTGCCGCATTATTAAGCGAGCGCACCAGACTGGTGATCCTCAACACTCCGCATAACCCCAGTGCAACTGTCTGGCAGCAGGCTGATTTCGCCGCTTTGTGGCAGGCGATCGCCGGGCACGAGATTTTTGTCATTAGCGATGAAGTCTACGAGCACATCAACTTTTCACAACAGGGCCATGCCAGTGTGCTGGCGCATCCGCAGCTGCGTGAGCGGGCAGTGGCGGTTTCTTCATTTGGCAAGACCTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCCGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTACCGTGTGAAGGTACATACTTTTTGCTGGTGGATTACAGCGCGGTTTCTACCCTGGATGATGTTGAGTTTTGCCAGTGGCTGACGCAGGAGCACGGCGTAGCGGCGATTCCGCTGTCGGTGTTTTGCGCCGATCCCTTCCCACATAAACTGATTCGTCTCTGTTTTGCCAAGAAGGAATCGACGTTGCTGGCAGCAGCTGAACGCCTGCGCCAGCTTTAG", - "dna_sequence_length": 1161, - "functions": [ - "methionine aminotransferase, PLP-dependent" - ], - "id": "CDS_599", - "location": [ - [ - "NC_000913", - 633586, - "+", - 1161 - ] - ], - "md5": "a1295014cc6db6372eab0f148e5752f6", - "parent_gene": "", - "protein_md5": "f6d1510051046d56009b53e5ef373284", - "protein_translation": "MTNNPLIPQSKLPQLGTTIFTQMSALAQQHQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQL", - "protein_translation_length": 386, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945206" - ], - [ - "gene_synonym", - "EcoGene:EG13532" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77174" - ], - [ - "gene_synonym", - "NP_415134.1" - ], - [ - "gene_synonym", - "b0601" - ], - [ - "gene_synonym", - "ybdM" - ], - [ - "gene_synonym", - "ASAP:ABE-0002071" - ], - [ - "gene_synonym", - "ECK0595" - ], - [ - "gene_synonym", - "GI:16128584" - ], - [ - "gene_synonym", - "JW0594" - ] - ], - "dna_sequence": "ATGGGGGATACTATGCAACAACGATTAACGCAGGATTTAACGCAATTTCTCGCCAGCTTGCCGGAAGATGATCGCATCAAAGCGATTAATGAAATCCGCATGGCGATCCATCAGGTTAGCCCCTTTCGTGAAGAGCCAGTGGATTGCGTTCTGTGGGTTAAAAACAGCCAACTTATGCCTAATGATTACAACCCAAACAACGTGGCACCACCCGAAAAAAAACTGCTGCAAAAATCCATTGAAATAGATGGTTTTACCCAACCCATTGTGGTCACACATACGGATAAAAATGCCATGGAAATCGTGGATGGTTTTCACCGCCATGAAATTGGTAAAGGCTCATCATCATTAAAATTACGCTTAAAAGGTTATTTGCCGGTGACCTGTCTGGAAGGTACGCGTAATCAACGCATCGCCGCGACTATTCGTCATAATCGCGCTCGTGGACGCCATCAAATCACCGCCATGTCGGAAATCGTCCGTGAACTTAGCCAGTTGGGATGGGACGATAATAAAATTGGCAAAGAGCTGGGAATGGACAGCGACGAAGTGCTGCGCCTGAAGCAAATTAACGGCCTGCAAGAGTTGTTTGCCGACCGTCAATATTCCCGCGCCTGGACGGTTAAATAG", - "dna_sequence_length": 630, - "functions": [ - "Spo0J family protein, ParB-like nuclease domain" - ], - "id": "CDS_600", - "location": [ - [ - "NC_000913", - 635376, - "-", - 630 - ] - ], - "md5": "2d7e70c348681d6c85747a1ae6643193", - "parent_gene": "", - "protein_md5": "e6bcf1e8bcf9075b917451d34e0761ec", - "protein_translation": "MGDTMQQRLTQDLTQFLASLPEDDRIKAINEIRMAIHQVSPFREEPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDKNAMEIVDGFHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQITAMSEIVRELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK", - "protein_translation_length": 209, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945205" - ], - [ - "gene_synonym", - "NP_415135.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77216" - ], - [ - "gene_synonym", - "ECK0596" - ], - [ - "gene_synonym", - "EcoGene:EG13533" - ], - [ - "gene_synonym", - "b0602" - ], - [ - "gene_synonym", - "ybdN" - ], - [ - "gene_synonym", - "ASAP:ABE-0002073" - ], - [ - "gene_synonym", - "JW0595" - ], - [ - "gene_synonym", - "GI:16128585" - ] - ], - "dna_sequence": "ATGTCTATTTATAAAATTCCTCTTCCGCTCAATATTCTGGAAGCTGCACGAGAGCGTATTACCTGGACACTCAACACCCTACCCCGCGTTTGTGTCTCATTTTCTGGCGGCAAAGACTCTGGTTTAATGCTGCATCTGACAGCCGAACTTGCCCGACAAATGGGCAAAAAAATCTGCGTTTTGTTTATCGACTGGGAGGCGCAATTCTCTTGCACCATTAACTATGTTCAGTCCCTGCGCGAGTTGTACACCGATGTCATCGAAGAGTTTTACTGGGTTGCGCTCCCGCTTACGACGCAAAATTCCCTTTCACAATACCAACCCGAATGGCAGTGCTGGGAACCTGATGTCGAATGGGTACGTCAACCTCCCCAAGATGCGATAACCGACCCTGACTTTTTCTGCTTTTACCAGCCAGGCATGACCTTCGAACAATTTGTACGTGAGTTTGCCGAATGGTTTTCACAAAAACGTCCGGCGGCGATGATGATCGGCATCCGTGCGGATGAGTCCTACAACCGTTTTGTCGCCATCGCCAGTTTAAATAAACAACGTTTTGCCGACGATAAACCCTGGACTACGGCCGCACCAGGCGGTCATAGCTGGTACATTTACCCCATTTACGACTGGAAAGTGGCTGATATCTGGACCTGGTATGCAAATCATCAAAGTCTCTGCAACCCACTGTATAACCTAATGTATCAGGCAGGCGTTCCTCTGCGTCATATGCGAATTTGCGAACCTTTTGGCCCGGAGCAACGACAAGGATTATGGCTCTATCACGTTATCGAACCGGATCGCTGGGCTGCTATGTGCGCACGAGTCAGCGGGGTAAAAAGTGGCGGCATTTACGCCGGACATGACAATCATTTCTATGGGCATCGGAAAATCCTCAAGCCAGAACATTTAGACTGGCAAGAATATGCATTATTGCTGCTCAATAGCATGCCGGAAAAAACAGCTGAGCATTACCGCAATAAAATCGCCATTTATTTGCACTGGTATCAGAAAAAAGGCATCGAGGTTCCACAAACCCAGCAAGGGGACATTGGCGCGAAAGATATCCCCTCCTGGCGGCGGATATGCAAAGTTTTACTCAATAACGATTACTGGTGTCGGGCATTATCATTTAGCCCCACAAAATCGAAGAACTATCAGCGTTATAACGAACGGATAAAAGGAAAACGTCAGGAATGGGGGATACTATGCAACAACGATTAA", 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- [ - "gene_synonym", - "b0603" - ], - [ - "gene_synonym", - "ybdO" - ], - [ - "gene_synonym", - "ASAP:ABE-0002077" - ], - [ - "gene_synonym", - "NP_415136.1" - ], - [ - "gene_synonym", - "GI:16128586" - ], - [ - "gene_synonym", - "JW0596" - ] - ], - "dna_sequence": "ATGGCCAATCTCTACGACTTGAAAAAGTTCGACTTAAATCTTCTTGTCATATTTGAGTGTATTTACCAGCATTTAAGCATTAGCAAAGCTGCTGAATCACTATATATCACCCCATCAGCCGTGAGCCAGTCGTTACAACGCTTACGTGCGCAATTTAATGACCCTTTATTCATTCGCTCAGGAAAAGGTATCGCGCCGACGACAACAGGGTTAAATCTGCATCACCATCTTGAGAAAAATCTCAGAGGCCTTGAACAAACAATTAATATAGTCAATAAGTCCGAACTAAAGAAAAACTTTATTATCTACGGCCCTCAGCTCATTTCTTGCTCTAATAATAGTATGCTGATCCGCTGCCTACGGCAAGATTCCTCTGTCGAGATTGAGTGCCATGATATCCTCATGTCAGCAGAGAATGCTGAAGAACTGTTGGTTCACCGCAAAGCCGATCTGGTGATCACCCAAATGCCAGTGATCAGCCGTTCCGTCATTTGCATGCCATTGCATACGATTCGCAATACTCTAATTTGTAGTAATAGGCATCCACGAATTACTGACAATAGCACTTATGAACAAATTATGGCAGAAGAGTTCACCCAATTAATATCTAAATCAGCAGGGGTTGATGATATTCAAATGGAAATAGACGAGAGATTTATGAATCGCAAAATCTCATTTCGTGGTTCCTCTTTGCTGACAATCATTAATAGCATTGCAGTTACAGATTTACTGGGAATAGTCCCCTATGAACTTTATAATTCCTACCGTGACTTTCTTAACTTAAAAGAGATAAAACTAGAACATCCGTTACCTTCAATAAAGCTTTACATTTCCTATAATAAATCTTCTTTAAATAATTTGGTGTTCTCCCGATTTATTGACCGTCTAAATGAGAGTTTTTGA", - "dna_sequence_length": 903, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_602", - "location": [ - [ - "NC_000913", - 637618, - "-", - 903 - ] - ], - "md5": "37b9dbf2cdea85f882d58e9929987b34", - "parent_gene": "", - "protein_md5": "6cc2134a34b3420e90011cbc846c2255", - "protein_translation": "MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRAQFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNFIIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKADLVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF", - "protein_translation_length": 300, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0598" - ], - [ - "gene_synonym", - "GeneID:945224" - ], - [ - "gene_synonym", - "EcoGene:EG13535" - ], - [ - "gene_synonym", - "ybdP" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77202" - ], - [ - "gene_synonym", - "NP_415137.2" - ], - [ - "gene_synonym", - "GI:90111151" - ], - [ - "gene_synonym", - "b0604" - ], - [ - "gene_synonym", - "ASAP:ABE-0002084" - ], - [ - "gene_synonym", - "dsbG" - ], - [ - "gene_synonym", - "JW0597" - ] - ], - "dna_sequence": "ATGTTAAAAAAGATACTTTTACTGGCTCTGCTTCCTGCAATCGCCTTCGCAGAGGAACTTCCTGCTCCAGTAAAAGCGATTGAAAAACAGGGCATTACAATCATCAAAACATTCGATGCCCCCGGAGGAATGAAAGGTTATCTCGGAAAGTATCAGGATATGGGCGTCACCATCTACCTGACTCCAGATGGTAAGCACGCTATCTCTGGTTACATGTACAACGAGAAAGGTGAAAACCTGAGTAACACACTTATCGAAAAAGAAATTTACGCACCAGCCGGACGCGAAATGTGGCAACGGATGGAACAATCCCACTGGCTCCTCGACGGTAAAAAAGATGCGCCGGTCATTGTCTACGTCTTCGCCGATCCGTTCTGCCCATATTGTAAACAGTTCTGGCAGCAGGCGCGCCCGTGGGTAGATTCTGGCAAAGTGCAATTAAGAACATTGTTGGTTGGGGTTATCAAGCCAGAAAGCCCGGCGACAGCAGCGGCAATTCTTGCCTCCAAAGATCCCGCAAAAACCTGGCAACAATATGAAGCCTCTGGTGGCAAGCTTAAGCTAAACGTGCCTGCAAACGTAAGTACAGAGCAAATGAAAGTGTTAAGTGACAATGAGAAACTGATGGACGATCTGGGGGCAAATGTCACGCCGGCTATCTATTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAATAAATAA", - "dna_sequence_length": 747, - "functions": [ - "thiol:disulfide interchange protein, periplasmic" - ], - "id": "CDS_603", - "location": [ - [ - "NC_000913", - 638573, - "-", - 747 - ] - ], - "md5": "f043f2d7443bb98ba4df856ea1bab346", - "parent_gene": "", - "protein_md5": "5c09e1fccbdf2cf009b12ce39f427bbf", - "protein_translation": "MLKKILLLALLPAIAFAEELPAPVKAIEKQGITIIKTFDAPGGMKGYLGKYQDMGVTIYLTPDGKHAISGYMYNEKGENLSNTLIEKEIYAPAGREMWQRMEQSHWLLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDSGKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNIIMGNK", - "protein_translation_length": 248, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11384" - ], - [ - "gene_synonym", - "ECK0599" - ], - [ - "gene_synonym", - "GeneID:945225" - ], - [ - "gene_synonym", - "GI:16128588" - ], - [ - "gene_synonym", - "JW0598" - ], - [ - "gene_synonym", - "NP_415138.1" - ], - [ - "gene_synonym", - "b0605" - ], - [ - "gene_synonym", - "ASAP:ABE-0002090" - ], - [ - "gene_synonym", - "ahpC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE08" - ], - [ - "gene_synonym", - "tpx" - ] - ], - "dna_sequence": "ATGTCCTTGATTAACACCAAAATTAAACCTTTTAAAAACCAGGCATTCAAAAACGGCGAATTCATCGAAATCACCGAAAAAGATACCGAAGGCCGCTGGAGCGTCTTCTTCTTCTACCCGGCTGACTTTACTTTCGTATGCCCGACCGAACTGGGTGACGTTGCTGACCACTACGAAGAACTGCAGAAACTGGGCGTAGACGTATACGCAGTATCTACCGATACTCACTTCACCCACAAAGCATGGCACAGCAGCTCTGAAACCATCGCTAAAATCAAATATGCGATGATCGGCGACCCGACTGGCGCCCTGACCCGTAACTTCGACAACATGCGTGAAGATGAAGGTCTGGCTGACCGTGCGACCTTCGTTGTTGACCCGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAA", - "dna_sequence_length": 564, - "functions": [ - "alkyl hydroperoxide reductase, C22 subunit" - ], - "id": "CDS_604", - "location": [ - [ - "NC_000913", - 638945, - "+", - 564 - ] - ], - "md5": "2ee9c52846050595f79e15d24274be6c", - "parent_gene": "", - "protein_md5": "1a3d18fa4a35b13df73e9a69b4707a58", - "protein_translation": "MSLINTKIKPFKNQAFKNGEFIEITEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYAVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVASHPGEVCPAKWKEGEATLAPSLDLVGKI", - "protein_translation_length": 187, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0606" - ], - [ - "gene_synonym", - "ECK0600" - ], - [ - "gene_synonym", - "JW0599" - ], - [ - "gene_synonym", - "ahpF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P35340" - ], - [ - "gene_synonym", - "NP_415139.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0002093" - ], - [ - "gene_synonym", - "GI:90111152" - ], - [ - "gene_synonym", - "GeneID:947540" - ], - [ - "gene_synonym", - "EcoGene:EG11385" - ] - ], - "dna_sequence": "ATGCTCGACACAAATATGAAAACTCAACTCAAGGCTTACCTTGAGAAATTGACCAAGCCTGTTGAGTTAATTGCCACGCTGGATGACAGCGCTAAATCGGCAGAAATCAAGGAACTGTTGGCTGAAATCGCAGAACTGTCAGACAAAGTCACCTTTAAAGAAGATAACAGCTTGCCGGTGCGTAAGCCGTCTTTCCTGATCACCAACCCAGGTTCCAACCAGGGGCCACGTTTTGCAGGCTCCCCGCTGGGCCACGAGTTCACCTCGCTGGTACTGGCGTTGCTGTGGACCGGTGGTCATCCGTCGAAAGAAGCGCAGTCTCTGCTGGAGCAGATTCGCCATATTGACGGTGATTTTGAATTCGAAACCTATTACTCGCTCTCTTGCCACAACTGCCCGGACGTGGTGCAGGCGCTGAACCTGATGAGCGTACTGAACCCGCGCATCAAGCACACTGCAATTGACGGCGGCACCTTCCAGAACGAAATCACCGATCGCAACGTGATGGGCGTTCCGGCAGTGTTCGTAAACGGGAAAGAGTTTGGTCAGGGCCGCATGACGTTGACTGAAATCGTTGCCAAAATTGATACTGGCGCGGAAAAACGTGCGGCAGAAGAGCTGAACAAGCGTGATGCTTATGACGTATTAATCGTCGGTTCCGGCCCGGCGGGTGCAGCGGCAGCAATTTACTCCGCACGTAAAGGCATCCGTACCGGTCTGATGGGCGAACGTTTTGGTGGTCAGATCCTCGATACCGTTGATATCGAAAACTACATTTCTGTACCGAAGACTGAAGGGCAGAAGCTGGCAGGCGCACTGAAAGTTCACGTTGATGAATACGACGTTGATGTGATCGACAGCCAGAGCGCCAGCAAACTGATCCCAGCAGCAGTTGAAGGTGGTCTGCATCAGATTGAAACAGCTTCTGGCGCGGTACTGAAAGCACGCAGCATTATCGTGGCGACCGGTGCAAAATGGCGCAACATGAACGTTCCGGGCGAAGATCAGTATCGCACCAAAGGCGTGACCTACTGCCCGCACTGCGACGGCCCGCTGTTTAAAGGTAAACGCGTAGCGGTTATCGGCGGCGGTAACTCCGGCGTGGAAGCGGCAATTGACCTGGCGGGTATCGTTGAGCACGTAACGCTGCTGGAATTTGCGCCAGAAATGAAAGCCGACCAGGTTCTGCAGGACAAACTGCGCAGCCTGAAAAACGTCGACATTATTCTGAATGCGCAAACCACGGAAGTGAAAGGCGACGGCAGCAAAGTCGTTGGTCTGGAATATCGAGATCGTGTCAGCGGCGATATTCACAACATCGAACTGGCCGGTATTTTCGTCCAGATTGGTCTGCTGCCGAACACCAACTGGCTCGAAGGCGCAGTCGAACGTAACCGCATGGGCGAGATTATCATTGATGCGAAATGCGAAACCAACGTGAAAGGCGTGTTCGCAGCGGGTGACTGTACGACGGTTCCGTACAAGCAGATCATCATCGCCACTGGCGAAGGTGCCAAAGCCTCTCTGAGTGCTTTTGACTACCTGATTCGCACCAAAACTGCATAA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P39177" - ], - [ - "gene_synonym", - "NP_415140.1" - ], - [ - "gene_synonym", - "ybdQ" - ], - [ - "gene_synonym", - "JW0600" - ], - [ - "gene_synonym", - "yzzU" - ], - [ - "gene_synonym", - "ECK0601" - ], - [ - "gene_synonym", - "ASAP:ABE-0002095" - ], - [ - "gene_synonym", - "b0607" - ], - [ - "gene_synonym", - "EcoGene:EG12683" - ], - [ - "gene_synonym", - "GI:16128590" - ], - [ - "gene_synonym", - "GeneID:945229" - ], - [ - "gene_synonym", - "uspG" - ] - ], - "dna_sequence": "ATGTATAAGACAATCATTATGCCAGTTGATGTATTTGAAATGGAATTGAGCGACAAAGCTGTTCGCCACGCTGAATTCCTCGCCCAGGATGACGGAGTTATTCATCTACTTCACGTACTACCCGGGTCAGCCAGCCTGAGCCTGCACCGTTTTGCCGCTGATGTGCGTCGTTTTGAAGAGCATCTGCAACATGAAGCACAAGAACGTCTGCAAACGATGGTCAGCCACTTCACCATCGATCCTTCCCGCATTAAACAACATGTCCGTTTTGGTAGCGTGCGGGATGAAGTCAATGAGTTGGCAGAAGAACTGGGGGCTGATGTTGTAGTTATTGGTTCTCGCAACCCATCGATTTCGACCCATCTGTTAGGTTCTAACGCCTCGAGCGTGATCCGCCACGCCAATCTGCCGGTGCTGGTTGTGCGTTAA", - "dna_sequence_length": 429, - "functions": [ - "universal stress protein UP12" - ], - "id": "CDS_606", - "location": [ - [ - "NC_000913", - 641867, - "-", - 429 - ] - ], - "md5": "0f1cd28dd800fb9c32d5e4b63eb96758", - "parent_gene": "", - "protein_md5": "c43a041181261d5f8344bb6d01bcee7b", - "protein_translation": "MYKTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSLHRFAADVRRFEEHLQHEAQERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAEELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR", - "protein_translation_length": 142, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415141.1" - ], - [ - "gene_synonym", - "JW0601" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77316" - ], - [ - "gene_synonym", - "EcoGene:EG13537" - ], - [ - "gene_synonym", - "ybdR" - ], - [ - "gene_synonym", - "ECK0602" - ], - [ - "gene_synonym", - "GeneID:949067" - ], - [ - "gene_synonym", - "b0608" - ], - [ - "gene_synonym", - "GI:16128591" - ], - [ - "gene_synonym", - "ASAP:ABE-0002099" - ] - ], - "dna_sequence": "ATGAAAGCATTGACTTATCACGGCCCACATCACGTTCAGGTAGAAAATGTTCCCGATCCGGGCGTTGAACAGGCAGATGATATTATTCTGCGTATTACGGCAACGGCGATCTGTGGCTCTGACCTCCATCTTTATCGAGGCAAAATACCTCAGGTTAAACATGGCGATATTTTTGGTCATGAATTTATGGGGGAAGTAGTTGAAACCGGAAAGGACGTAAAAAATTTGCAAAAAGGCGACCGAGTGGTAATTCCGTTCGTCATTGCTTGTGGCGACTGTTTTTTCTGTCGATTGCAACAATATGCCGCCTGCGAAAATACCAATGCGGGTAAAGGCGCTGCGCTCAATAAAAAACAGATACCAGCTCCAGCGGCATTGTTTGGTTATAGTCACCTGTATGGCGGCGTTCCTGGTGGGCAGGCGGAATATGTCCGCGTCCCTAAAGGGAATGTGGGGCCGTTTAAAGTACCGCCTTTGCTTTCAGATGATAAAGCGCTTTTCCTTTCTGATATTCTGCCAACGGCATGGCAGGCAGCAAAAAATGCGCAGATCCAACAAGGTTCAAGCGTTGCAGTCTATGGTGCTGGTCCTGTGGGATTGTTGACAATCGCCTGTGCACGGTTGCTCGGTGCGGAACAGATTTTTGTTGTTGATCATCATCCCTACCGCTTGCATTTCGCCGCCGACCGCTACGGCGCGATCCCGATTAATTTTGATGAAGACAGCGATCCGGCACAGTCAATTATTGAACAAACGGCAGGTCACCGGGGCGTGGATGCAGTAATAGACGCCGTCGGTTTTGAAGCGAAAGGCAGCACCACGGAAACGGTGCTGACTAACCTGAAACTGGAGGGCAGCAGCGGTAAAGCGTTGCGTCAGTGTATTGCGGCGGTCAGGCGTGGCGGCATTGTTAGCGTACCGGGCGTCTACGCTGGATTTATTCACGGTTTCCTGTTTGGCGACGCCTTTGATAAAGGGTTGTCGTTTAAAATGGGACAGACCCACGTTCACGCATGGCTGGGAGAATTATTACCGTTAATTGAGAAAGGATTACTGAAACCAGAAGAAATTGTTACCCACTATATGCCGTTTGAAGAGGCCGCCCGGGGATATGAGATTTTCGAAAAACGTGAAGAGGAGTGCCGTAAGGTGATTCTGGTACCCGGTGCACAAAGCGCAGAGGCGGCGCAGAAGGCGGTTTCAGGTCTGGTGAATGCGATGCCGGGGGGAACAATATGA", 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], - [ - "gene_synonym", - "NP_415143.1" - ], - [ - "gene_synonym", - "b0610" - ], - [ - "gene_synonym", - "EcoGene:EG12637" - ], - [ - "gene_synonym", - "ASAP:ABE-0002104" - ], - [ - "gene_synonym", - "GI:16128593" - ], - [ - "gene_synonym", - "GeneID:947546" - ] - ], - "dna_sequence": "ATGTCCAGACCAACTATCATCATTAACGACCTGGATGCCGAACGCATCGATATTCTGCTGGAGCAACCCGCCTATGCTGGTTTGCCAATCGCCGACGCGTTAAACGCAGAGTTGGATCGCGCCCAAATGTGTTCGCCAGAAGAGATGCCACACGACGTGGTGACAATGAACAGCCGGGTTAAATTCCGCAATCTTAGCGATGGCGAAGTGCGTGTGCGCACGCTGGTGTATCCGGCAAAAATGACCGATAGCAATACTCAGCTTTCCGTTATGGCTCCGGTAGGTGCCGCACTGCTGGGGCTGCGCGTTGGCGATTCCATTCACTGGGAACTTCCGGGCGGCGTTGCAACCCACCTTGAAGTGCTGGAACTCGAATACCAGCCAGAAGCTGCTGGCGACTACCTGCTTTAA", - "dna_sequence_length": 411, - "functions": [ - "regulator of nucleoside diphosphate kinase" - ], - "id": "CDS_608", - "location": [ - [ - "NC_000913", - 643967, - "-", - 411 - ] - ], - "md5": "bcf7fa153b9584fd314612c38705704b", - "parent_gene": "", - "protein_md5": "e12fa98a49523be028e9ff30aee67f2c", - "protein_translation": "MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL", - "protein_translation_length": 136, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:949065" - ], - [ - "gene_synonym", - "EcoGene:EG10856" - ], - [ - "gene_synonym", - "rna" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21338" - ], - [ - "gene_synonym", - "b0611" - ], - [ - "gene_synonym", - "rnsA" - ], - [ - "gene_synonym", - "ASAP:ABE-0002107" - ], - [ - "gene_synonym", - "NP_415144.1" - ], - [ - "gene_synonym", - "GI:16128594" - ], - [ - "gene_synonym", - "JW0603" - ], - [ - "gene_synonym", - "ECK0604" - ] - ], - "dna_sequence": "ATGAAAGCATTCTGGCGTAACGCCGCGTTGCTCGCGGTTTCTCTGCTTCCCTTCTCTTCTGCCAACGCCTTAGCGTTGCAGGCAAAACAGTATGGCGATTTTGATCGCTATGTCCTGGCCCTCTCCTGGCAAACCGGATTTTGCCAGAGTCAACACGATCGAAATCGTAACGAACGAGATGAATGTCGCCTGCAAACCGAAACGACCAACAAAGCTGATTTTCTGACCGTACATGGTCTGTGGCCAGGATTGCCTAAATCGGTTGCTGCCCGTGGTGTTGATGAACGCCGCTGGATGCGCTTCGGTTGCGCTACTCGCCCAATCCCGAATCTACCAGAAGCGCGCGCCAGCCGAATGTGTTCATCGCCGGAAACCGGATTATCACTGGAAACGGCCGCTAAACTAAGTGAAGTCATGCCAGGAGCTGGCGGACGTTCCTGCCTGGAACGCTACGAATATGCCAAACACGGTGCCTGCTTTGGTTTTGATCCGGACGCATACTTCGGTACGATGGTACGCCTGAATCAAGAAATTAAAGAGAGCGAAGCCGGAAAATTCCTTGCGGATAATTACGGTAAAACAGTGAGCCGCCGTGACTTTGACGCCGCCTTTGCCAAAAGCTGGGGAAAAGAGAACGTGAAAGCAGTTAAGCTAACGTGCCAGGGTAACCCTGCGTATTTGACTGAAATTCAGATCTCGATCAAAGCTGACGCCATCAACGCTCCGCTTTCTGCAAACTCATTCTTGCCACAACCTCACCCAGGTAACTGTGGCAAAACCTTTGTGATTGATAAAGCGGGTTATTAA", - "dna_sequence_length": 807, - "functions": [ - "ribonuclease I" - ], - "id": "CDS_609", - "location": [ - [ - "NC_000913", - 645003, - "-", - 807 - ] - ], - "md5": "ab0f0ccda795dcf2028f28b15694d260", - "parent_gene": "", - "protein_md5": "2f6304267a8833c50e3ed177a80c66b1", - "protein_translation": "MKAFWRNAALLAVSLLPFSSANALALQAKQYGDFDRYVLALSWQTGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFGCATRPIPNLPEARASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACFGFDPDAYFGTMVRLNQEIKESEAGKFLADNYGKTVSRRDFDAAFAKSWGKENVKAVKLTCQGNPAYLTEIQISIKADAINAPLSANSFLPQPHPGNCGKTFVIDKAGY", - "protein_translation_length": 268, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002110" - ], - [ - "gene_synonym", - "EcoGene:EG13538" - ], - [ - "gene_synonym", - "NP_415145.1" - ], - [ - "gene_synonym", - "ybdS" - ], - [ - "gene_synonym", - "ECK0605" - ], - [ - "gene_synonym", - "citT" - ], - [ - "gene_synonym", - "JW0604" - ], - [ - "gene_synonym", - "b0612" - ], - [ - "gene_synonym", - "GeneID:949070" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE74" - ], - [ - "gene_synonym", - "GI:16128595" - ] - ], - "dna_sequence": "ATGTCTTTAGCAAAAGATAATATATGGAAACTATTGGCCCCACTGGTGGTGATGGGTGTCATGTTTCTTATCCCTGTCCCCGACGGTATGCCGCCGCAGGCATGGCATTACTTCGCTGTGTTTGTGGCAATGATTGTCGGCATGATCCTCGAGCCAATTCCGGCAACAGCGATCAGTTTTATTGCGGTTACTATTTGCGTTATTGGCAGTAATTACCTGCTCTTTGATGCCAAAGAATTAGCTGACCCAGCGTTTAATGCGCAAAAACAGGCGCTGAAATGGGGCCTGGCTGGTTTTTCCAGCACCACGGTATGGCTGGTATTTGGCGCATTTATTTTTGCATTAGGGTATGAAGTTTCCGGGTTAGGTCGTCGCATTGCCCTTTTCCTGGTGAAATTCATGGGCAAACGCACGCTGACGTTGGGTTATGCGATTGTCATTATCGACATTCTGCTGGCACCGTTTACACCTTCCAACACCGCGCGTACCGGGGGTACGGTTTTTCCGGTCATTAAAAACCTGCCGCCGTTGTTTAAATCATTCCCGAACGATCCGTCCGCGCGTCGTATTGGCGGCTATTTGATGTGGATGATGGTCATTAGTACCAGTCTGAGTTCGTCCATGTTTGTCACCGGTGCGGCACCAAACGTGCTGGGTCTGGAGTTCGTCAGCAAAATTGCCGGTATCCAGATTAGCTGGTTGCAGTGGTTCCTCTGCTTCCTGCCGGTTGGGGTTATCTTGCTTATCATTGCGCCGTGGCTTTCCTACGTGCTGTACAAACCGGAAATCACACACAGTGAAGAAGTGGCAACCTGGGCGGGTGATGAACTGAAAACCATGGGTGCGCTGACACGCAGAGAGTGGACACTGATTGGCCTTGTATTGCTCAGCTTAGGTTTGTGGGTATTTGGCAGTGAAGTCATTAATGCTACTGCGGTTGGTCTGCTGGCAGTTTCGCTAATGCTGGCCCTGCACGTTGTGCCTTGGAAAGACATTACCCGCTATAACAGCGCATGGAACACACTGGTCAACCTGGCAACTCTGGTTGTGATGGCTAACGGCCTGACTCGTTCTGGTTTTATTGACTGGTTCGCCGGTACCATGAGTACGCACCTGGAAGGATTCTCACCAAACGCAACGGTGATTGTACTGGTTCTGGTGTTCTACTTTGCACACTACCTGTTTGCCAGCCTGTCTGCGCACACCGCAACCATGCTGCCGGTTATTCTGGCCGTCGGTAAAGGTATTCCGGGCGTACCAATGGAACAACTGTGTATCCTGCTGGTGCTGTCTATCGGTATCATGGGCTGTCTGACGCCGTATGCAACCGGTCCTGGGGTGATTATTTACGGCTGTGGCTATGTGAAATCAAAAGATTACTGGCGTCTTGGCGCAATCTTCGGGGTGATTTACATCTCTATGTTGCTGTTGGTTGGCTGGCCGATTCTCGCCATGTGGAACTAA", 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"UniProtKB/Swiss-Prot:P77231" - ], - [ - "gene_synonym", - "ECK0606" - ], - [ - "gene_synonym", - "GeneID:946395" - ], - [ - "gene_synonym", - "JW0605" - ], - [ - "gene_synonym", - "ybdT" - ], - [ - "gene_synonym", - "b0613" - ], - [ - "gene_synonym", - "ASAP:ABE-0002114" - ], - [ - "gene_synonym", - "NP_415146.1" - ], - [ - "gene_synonym", - "GI:16128596" - ], - [ - "gene_synonym", - "citG" - ] - ], - "dna_sequence": "ATGTCGATGCCTGCAACGTCAACTAAAACCACAAAGCTTGCGACGTCATTAATCGATGAGTACGCCCTGCTGGGCTGGCGCGCCATGCTGACTGAAGTCAATCTGTCACCGAAACCAGGCCTCGTGGATCGCATTAACTGCGGTGCGCACAAAGATATGGCGCTGGAAGATTTCCACCGCAGCGCGCTGGCGATTCAGGGCTGGCTACCCCGTTTCATTGAATTTGGTGCCTGTAGTGCGGAAATGGCACCAGAAGCGGTACTCCACGGATTACGCCCAATTGGTATGGCTTGCGAAGGTGATATGTTCCGCGCCACTGCGGGCGTAAACACGCATAAAGGCAGCATTTTTTCTTTAGGGCTGCTATGTGCGGCAATTGGCCGTTTGCTTCAACTCAACCAACCGGTAACGCCAACAACCGTTTGTTCTACGGCGGCAAGTTTCTGCCGTGGCCTGACCGATCGCGAACTGCGTACCAATAATTCACAACTGACGGCAGGTCAACGGTTGTACCAACAGCTTGGCCTTACCGGCGCACGCGGTGAAGCCGAAGCGGGTTATCCACTGGTGATCAATCACGCCTTGCCGCATTACCTCACTCTGCTGGATCAGGGGTTAGATCCTGAACTGGCATTGCTCGATACCTTGCTCCTACTGATGGCGATCAACGGCGATACCAACGTTGCATCGCGCGGTGGCGAGGGGGGCCTGCGCTGGCTACAGCGCGAGGCGCAAACATTATTGCAAAAAGGGGGCATTCGAACCCCCGCCGATCTCGATTATCTCCGGCAGTTCGACAGGGAGTGTATCGAACGAAATCTCAGTCCAGGCGGCAGTGCTGACCTACTGATCCTTACCTGGTTTTTAGCACAGATTTAA", - "dna_sequence_length": 879, - "functions": [ - "2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase" - ], - "id": "CDS_611", - "location": [ - [ - "NC_000913", - 647509, - "-", - 879 - ] - ], - "md5": "b4b1057e26250b0331d35675749da33c", - "parent_gene": "", - "protein_md5": "a27ce1a7c7f7369ee4e47a9563e148fa", - "protein_translation": "MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTNNSQLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMAINGDTNVASRGGEGGLRWLQREAQTLLQKGGIRTPADLDYLRQFDRECIERNLSPGGSADLLILTWFLAQI", - "protein_translation_length": 292, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "citX" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6G5" - ], - [ - "gene_synonym", - "ASAP:ABE-0002116" - ], - [ - "gene_synonym", - "GeneID:949084" - ], - [ - "gene_synonym", - "ECK0607" - ], - [ - "gene_synonym", - "ybdU" - ], - [ - "gene_synonym", - "JW0606" - ], - [ - "gene_synonym", - "NP_415147.1" - ], - [ - "gene_synonym", - "b0614" - ], - [ - "gene_synonym", - "EcoGene:EG13540" - ], - [ - "gene_synonym", - "GI:16128597" - ] - ], - "dna_sequence": "ATGCACCTGCTTCCTGAACTCGCCAGCCACCATGCGGTATCAATTCCCGAGCTGCTCGTCAGCCGGGATGAAAGGCAAGCACGGCAACACGTCTGGCTCAAGCGCCATCCTGTTCCACTGGTCTCCTTTACCGTGGTTGCGCCTGGGCCGATTAAAGACAGCGAGGTCACACGCCGAATTTTTAATCATGGCGTGACAGCCTTGCGTGCCTTAGCCGCAAAACAGGGCTGGCAAATTCAGGAGCAGGCTGCACTGGTTTCCGCCAGCGGGCCGGAGGGCATGTTGAGCATTGCCGCCCCGGCTCGCGACCTCAAGCTCGCCACCATTGAGCTTGAACATAGTCATCCTCTCGGGCGGTTATGGGATATCGATGTCCTGACGCCCGAAGGCGAAATTCTCTCCCGCCGCGACTATTCACTGCCGCCTCGCCGCTGCCTGTTGTGCGAACAAAGCGCAGCCGTCTGCGCGCGTGGAAAAACCCATCAACTGACCGATTTACTCAACCGCATGGAGGCACTGCTGAACGATGTCGATGCCTGCAACGTCAACTAA", - "dna_sequence_length": 552, - "functions": [ - "apo-citrate lyase phosphoribosyl-dephospho-CoA transferase" - ], - "id": "CDS_612", - "location": [ - [ - "NC_000913", - 648035, - "-", - 552 - ] - ], - "md5": "e0704199963d3ef2c2b00ba9b6afbbe3", - "parent_gene": "", - "protein_md5": "55962c696a5d196a123b462b4b9fca6c", - "protein_translation": "MHLLPELASHHAVSIPELLVSRDERQARQHVWLKRHPVPLVSFTVVAPGPIKDSEVTRRIFNHGVTALRALAAKQGWQIQEQAALVSASGPEGMLSIAAPARDLKLATIELEHSHPLGRLWDIDVLTPEGEILSRRDYSLPPRRCLLCEQSAAVCARGKTHQLTDLLNRMEALLNDVDACNVN", - "protein_translation_length": 183, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128598" - ], - [ - "gene_synonym", - "ECK0608" - ], - [ - "gene_synonym", - "ybdV" - ], - [ - "gene_synonym", - "JW5087" - ], - [ - "gene_synonym", - "citF" - ], - [ - "gene_synonym", - "b0615" - ], - [ - "gene_synonym", - "ASAP:ABE-0002119" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75726" - ], - [ - "gene_synonym", - "GeneID:945230" - ], - [ - "gene_synonym", - "EcoGene:EG13541" - ], - [ - "gene_synonym", - "NP_415148.1" - ] - ], - "dna_sequence": "ATGACGCAGAAAATTGAACAATCTCAACGACAAGAACGGGTAGCGGCCTGGAATCGTCGCGCTGAATGCGATCTTGCCGCTTTCCAGAACTCGCCAAAGCAAACCTACCAGGCTGAAAAAGCGCGCGATCGCAAACTGTGCGCCAACCTGGAAGAAGCGATTCGTCGCTCTGGTTTACAGGACGGCATGACGGTTTCCTTCCATCACGCTTTCCGTGGCGGTGACCTGACCGTCAATATGGTGATGGACGTCATCGCGAAGATGGGCTTTAAAAACCTGACCCTGGCGTCCAGCTCCCTGAGTGATTGCCATGCGCCGCTGGTAGAACACATTCGCCAGGGCGTGGTTACCCGCATTTATACCTCCGGCCTGCGTGGTCCACTGGCGGAAGAGATCTCCCGTGGTCTGCTGGCAGAACCGGTGCAGATCCACTCTCACGGCGGTCGTGTGCATCTGGTACAGAGCGGCGAACTGAATATCGACGTGGCTTTCCTCGGCGTCCCGTCCTGTGATGAATTCGGTAATGCCAACGGCTACACCGGTAAAGCCTGCTGCGGCTCCCTCGGCTATGCAATAGTTGATGCCGACAACGCAAAACAGGTCGTGATGCTTACCGAAGAACTGCTGCCTTATCCGCATAATCCGGCAAGCATTGAGCAAGATCAGGTTGATTTGATCGTCAAAGTTGACCGCGTTGGCGATGCTGCAAAAATCGGCGCTGGCGCGACCCGTATGACCACTAACCCGCGCGAACTGCTTATTGCCCGTAGCGCTGCGGATGTGATTGTCAACTCTGGCTACTTCAAAGAAGGTTTCTCCATGCAAACCGGCACCGGCGGCGCATCGCTGGCGGTAACCCGTTTCCTGGAAGACAAAATGCGTAGCCGCGATATTCGCGCCGACTTCGCCCTTGGCGGTATTACCGCGACGATGGTTGACCTGCACGAAAAAGGTCTGATCCGCAAACTGCTGGATGTGCAGAGCTTTGACAGCCATGCTGCGCAATCGCTGGCCCGTAACCCCAATCACATCGAAATCAGCGCCAACCAGTACGCTAACTGGGGTTCGAAAGGCGCATCGGTTGATCGTCTCGACGTGGTGGTACTGAGCGCGCTGGAAATTGACACCCAGTTCAACGTTAACGTGCTGACCGGCTCTGACGGCGTACTGCGTGGTGCTTCCGGTGGTCACTGCGATACCGCGATTGCCTCTGCGCTTTCCATCATCGTCGCGCCGCTGGTACGCGGTCGTATTCCGACTCTGGTGGATAACGTACTGACCTGCATCACCCCAGGCTCCAGTGTCGATATTCTGGTCACAGACCACGGTATCGCAGTTAACCCGGCACGTCCGGAACTGGCAGAACGTCTGCAGGAAGCGGGCATTAAAGTGGTTTCCATTGAGTGGCTGCGCGAACGTGCGCGTCTGCTGACCGGTGAACCACAGCCGATTGAATTCACAGACCGCGTCGTTGCCGTTGTGCGTTACCGCGATGGCTCGGTGATCGATGTTGTGCATCAGGTGAAGGAATAA", 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"ECK0609" - ], - [ - "gene_synonym", - "ybdW" - ], - [ - "gene_synonym", - "b0616" - ], - [ - "gene_synonym", - "EcoGene:EG13542" - ], - [ - "gene_synonym", - "GI:90111153" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9I1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002122" - ], - [ - "gene_synonym", - "citE" - ], - [ - "gene_synonym", - "NP_415149.4" - ], - [ - "gene_synonym", - "GeneID:945406" - ] - ], - "dna_sequence": "ATGATTTCCGCTTCGCTGCAACAACGTAAAACTCGCACCCGCCGCAGCATGTTGTTTGTGCCTGGTGCCAATGCCGCGATGGTCAGCAACTCCTTCATCTACCCGGCTGATGCCCTGATGTTTGACCTCGAAGACTCCGTAGCATTGCGTGAAAAAGACACCGCCCGCCGCATGGTTTACCACGCGCTGCAACATCCGCTGTATCGCGATATTGAAACCATTGTGCGTGTCAACGCGCTGGATTCCGAATGGGGTGTTAACGACCTGGAAGCCGTCGTTCGCGGTGGTGCGGACGTTGTGCGTCTGCCGAAAACCGATACCGCTCAGGATGTTCTGGATATTGAAAAAGAGATCCTGCGTATCGAAAAAGCCTGTGGTCGTGAACCCGGCAGCACCGGCCTGCTGGCGGCGATTGAATCTCCGCTGGGGATTACCCGCGCAGTGGAAATCGCTCACGCTTCCGAGCGTTTGATCGGTATCGCCCTCGGTGCAGAAGACTATGTGCGCAACCTGCGTACAGAACGCTCCCCGGAAGGAACTGAACTGCTGTTCGCACGCTGTTCCATTTTGCAGGCCGCGCGCTCTGCGGGTATTCAGGCGTTCGATACCGTCTATTCCGACGCTAACAACGAAGCCGGATTTCTGCAAGAAGCCGCCCACATCAAACAGCTGGGCTTTGACGGCAAATCGCTGATCAACCCGCGTCAGATTGATCTGCTGCACAACCTCTACGCACCGACCCAGAAAGAAGTGGATCACGCCCGCCGCGTCGTAGAAGCCGCTGAAGCCGCCGCTCGCGAAGGCCTCGGCGTGGTTTCCCTGAACGGCAAGATGGTGGACGGTCCGGTTATCGATCGCGCCCGTCTGGTGCTCTCCCGTGCAGAACTTTCCGGCATCCGCGAAGAATAA", - "dna_sequence_length": 909, - "functions": [ - "citrate lyase, citryl-ACP lyase (beta) subunit" - ], - "id": "CDS_614", - "location": [ - [ - "NC_000913", - 650490, - "-", - 909 - ] - ], - "md5": "72d9a93504540b5f0ff194729784f089", - "parent_gene": "", - "protein_md5": "2bf4dbadb6f030f580754e5d6a4776b1", - "protein_translation": "MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLEDSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRLPKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGIALGAEDYVRNLRTERSPEGTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEAAHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNGKMVDGPVIDRARLVLSRAELSGIREE", - "protein_translation_length": 302, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0609" - ], - [ - "gene_synonym", - "ECK0610" - ], - [ - "gene_synonym", - "ybdX" - ], - [ - "gene_synonym", - "GeneID:945415" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69330" - ], - [ - "gene_synonym", - "ASAP:ABE-0002124" - ], - [ - "gene_synonym", - "b0617" - ], - [ - "gene_synonym", - "GI:16128600" - ], - [ - "gene_synonym", - "citD" - ], - [ - "gene_synonym", - "NP_415150.1" - ], - [ - "gene_synonym", - "EcoGene:EG13543" - ] - ], - "dna_sequence": "ATGAAAATAAACCAGCCCGCCGTTGCAGGCACCCTTGAGTCTGGGGATGTGATGATACGCATCGCCCCACTCGATACGCAGGATATCGACCTGCAAATCAATAGCAGCGTTGAGAAACAGTTTGGCGATGCAATTCGCACCACCATTCTGGACGTTCTCGCCCGCTACAACGTGCGCGGCGTACAGCTGAATGTCGATGACAAAGGCGCACTGGACTGCATTTTACGTGCACGACTGGAAGCCCTGCTGGCACGCGCCAGCGGTATCCCGGCTCTGCCATGGGAGGATTGCCAATGA", - "dna_sequence_length": 297, - "functions": [ - "citrate lyase, acyl carrier (gamma) subunit" - ], - "id": "CDS_615", - "location": [ - [ - "NC_000913", - 650783, - "-", - 297 - ] - ], - "md5": "22d1b5e7d06412f8b53e2e6251b0d118", - "parent_gene": "", - "protein_md5": "e0f1cc85c9d62b640c6184fbf68bd83e", - "protein_translation": "MKINQPAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGDAIRTTILDVLARYNVRGVQLNVDDKGALDCILRARLEALLARASGIPALPWEDCQ", - "protein_translation_length": 98, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0611" - ], - [ - "gene_synonym", - "GI:90111154" - ], - [ - "gene_synonym", - "JW0610" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77390" - ], - [ - "gene_synonym", - "ybeO" - ], - [ - "gene_synonym", - "EcoGene:EG13645" - ], - [ - "gene_synonym", - "NP_415151.4" - ], - [ - "gene_synonym", - "b0618" - ], - [ - "gene_synonym", - "citC" - ], - [ - "gene_synonym", - "GeneID:945231" - ], - [ - "gene_synonym", - "ASAP:ABE-0002126" - ] - ], - "dna_sequence": "ATGTTCGGCAATGATATTTTCACCCGCGTAAAACGTTCAGAAAATAAAAAAATGGCGGAAATCGCCCAATTCCTGCATGAAAATGATTTGAGCGTTGACACCACAGTCGAAGTATTTATTACCGTAACCCGCGATGAAAAGCTTATCGCGTGCGGTGGAATTGCCGGAAATATTATTAAATGCGTTGCTATCAGTGAATCCGTCCGCGGTGAAGGACTGGCGCTGACATTAGCCACTGAATTGATAAACCTCGCCTATGAGCGGCACAGCACGCATCTGTTTATTTATACCAAAACCGAATACGAGGCGCTGTTCCGCCAGTGCGGTTTTTCCACGCTGACCAGCGTACCCGGCGTGATGGTGCTGATGGAAAACAGCGCCACGCGACTGAAACGCTATGCCGAATCGCTGAAAAAATTTCGTCATCCAGGGAACAAGATTGGCTGCATTGTGATGAACGCCAATCCCTTTACGAATGGTCACCGTTATCTGATTCAACAGGCTGCGGCACAGTGCGACTGGTTGCATCTGTTTTTAGTCAAAGAAGATTCTTCACGCTTCCCCTATGAAGACCGGCTGGATTTGGTGTTAAAAGGCACCGCCGATATTCCACGCCTGACTGTGCATCGTGGCTCCGAATACATCATCTCCCGCGCTACGTTCCCTTGCTACTTCATTAAAGAACAGAGCGTCATTAACCATTGTTACACCGAAATTGATCTGAAGATTTTCCGTCAGTACCTCGCTCCCGCGCTGGGTGTAACTCACCGCTTTGTCGGTACTGAACCCTTTTGTCGCGTTACCGCCCAGTACAACCAGGATATGCGCTACTGGCTGGAAACGCCGACTATCTCCGCACCGCCCATCGAACTGGTTGAAATTGAGCGGCTGCGTTACCAGGAGATGCCGATATCCGCTTCCCGGGTACGTCAACTGCTGGCGAAAAACGATCTCACGGCTATCGCGCCGCTGGTCCCTGCAGTCACGCTGCATTATTTGCAGAACCTGCTTGAGCACTCCCGCCAGGACGCGGCAGCTCGTCAAAAGACCCCCGCATGA", 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[ - "gene_synonym", - "ybeP" - ], - [ - "gene_synonym", - "NP_415152.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002129" - ], - [ - "gene_synonym", - "dpiB" - ], - [ - "gene_synonym", - "GeneID:945233" - ], - [ - "gene_synonym", - "GI:16128602" - ], - [ - "gene_synonym", - "citA" - ], - [ - "gene_synonym", - "b0619" - ], - [ - "gene_synonym", - "criS" - ] - ], - "dna_sequence": "ATGTTGCAGCTTAACGAGAATAAACAGTTTGCATTTTTCCAAAGACTGGCATTTCCGCTGCGTATCTTTTTGCTGATTCTGGTGTTCTCAATATTTGTCATTGCAGCCCTGGCGCAATATTTTACGGCCAGTTTTGAGGACTATTTAACGCTTCATGTACGCGACATGGCAATGAATCAGGCGAAAATTATTGCCTCCAATGACAGTGTCATCTCTGCGGTGAAAACGCGTGACTACAAACGGCTGGCGACCATCGCTAACAAATTACAAAGAGATACCGATTTTGATTATGTGGTGATTGGGGACCGGCACTCGATCCGCCTTTACCATCCTAATCCGGAGAAAATTGGTTATCCTATGCAGTTCACCAAACAGGGCGCGCTGGAGAAAGGGGAGAGCTACTTCATTACCGGGAAAGGGTCAATGGGGATGGCGATGCGCGCCAAAACGCCAATCTTTGATGACGATGGAAAAGTCATCGGCGTGGTGTCGATTGGCTACCTGGTGAGTAAAATCGATAGCTGGCGGGCTGAGTTTTTATTACCGATGGCAGGTGTGTTTGTCGTGCTGTTAGGGATTCTGATGTTGCTGTCGTGGTTCCTGGCCGCGCATATCCGTCGGCAGATGATGGGCATGGAGCCAAAGCAAATCGCACGCGTGGTCCGTCAGCAAGAGGCGCTGTTTAGTTCGGTTTATGAAGGGCTGATTGCGGTGGATCCGCATGGTTACATTACCGCCATCAATCGTAACGCAAGAAAGATGCTGGGGCTGAGTTCCCCCGGACGGCAATGGTTGGGTAAACCCATTGTTGAAGTGGTCAGGCCCGCCGATTTCTTTACCGAACAGATTGATGAAAAACGTCAGGATGTGGTGGCGAACTTTAACGGTCTGAGCGTTATTGCCAACCGGGAAGCTATTCGTTCAGGTGATGATTTGCTGGGGGCCATTATCAGCTTTCGTAGTAAAGACGAAATTTCCACCCTCAATGCGCAACTGACGCAAATAAAACAATACGTTGAGAGCCTTCGTACATTGCGACACGAGCATCTCAATTGGATGTCGACGCTCAATGGTCTGTTGCAGATGAAAGAGTATGATCGCGTGCTGGCGATGGTGCAGGGGGAGTCTCAGGCCCAGCAACAGCTTATTGACAGCCTGCGCGAGGCGTTTGCCGATCGCCAGGTGGCGGGGCTGCTTTTTGGTAAAGTGCAGCGCGCCCGGGAACTGGGGCTAAAAATGATCATTGTCCCCGGTAGCCAGCTTTCGCAACTGCCGCCAGGACTGGATAGCACCGAGTTTGCAGCCATTGTGGGCAATTTACTTGATAACGCCTTCGAAGCCAGCCTGCGTAGCGATGAAGGAAACAAGATCGTTGAATTATTCCTCAGCGATGAAGGCGATGATGTGGTGATTGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAGGGGGTCAGTACGCGTGCTGACGAGCCCGGTGAACATGGCATTGGGTTGTACTTGATTGCCAGCTACGTAACGCGCTGCGGTGGTGTTATCACTCTCGAAGATAATGATCCCTGCGGTACCTTATTTTCAATCTATATTCCGAAAGTGAAACCTAATGACAGCTCCATTAACCCTATTGATCGTTGA", 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"gene_synonym", - "GeneID:947008" - ], - [ - "gene_synonym", - "ECK0613" - ], - [ - "gene_synonym", - "mpdA" - ], - [ - "gene_synonym", - "JW0612" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEF4" - ], - [ - "gene_synonym", - "NP_415153.1" - ], - [ - "gene_synonym", - "EcoGene:EG13544" - ], - [ - "gene_synonym", - "dpiA" - ], - [ - "gene_synonym", - "ASAP:ABE-0002131" - ], - [ - "gene_synonym", - "GI:16128603" - ], - [ - "gene_synonym", - "citB" - ], - [ - "gene_synonym", - "criR" - ], - [ - "gene_synonym", - "b0620" - ] - ], - "dna_sequence": "ATGACAGCTCCATTAACCCTATTGATCGTTGAGGACGAAACGCCGCTGGCAGAGATGCATGCGGAATATATTCGTCACATTCCCGGATTCAGTCAGATATTACTGGCGGGAAATCTGGCGCAGGCCCGAATGATGATCGAGCGTTTTAAGCCGGGGCTAATCTTGCTCGATAACTATCTTCCTGACGGTAGAGGGATTAATTTACTGCATGAACTGGTGCAGGCGCATTATCCCGGCGACGTGGTGTTTACCACTGCAGCCAGCGATATGGAAACGGTGTCTGAAGCCGTACGTTGTGGTGTATTTGATTATCTCATTAAGCCCATTGCCTATGAACGGCTGGGGCAAACGCTAACCCGTTTCCGCCAGCGTAAACATATGCTGGAAAGTATTGATAGCGCCAGCCAGAAGCAAATTGATGAGATGTTTAATGCTTATGCTCGCGGTGAACCTAAGGACGAGCTACCGACCGGCATTGACCCCTTGACGCTAAACGCGGTGCGAAAACTGTTTAAAGAGCCTGGTGTGCAACATACGGCAGAAACGGTGGCGCAGGCACTGACCATCAGCCGCACCACTGCCAGGCGTTATCTTGAATATTGCGCCAGCCGCCATCTGATTATTGCTGAAATTGTTCACGGCAAAGTTGGCAGACCACAACGCATATACCACAGTGGGTGA", - "dna_sequence_length": 681, - "functions": [ - "response regulator in two-component regulatory system with CitA" - ], - "id": "CDS_618", - "location": [ - [ - "NC_000913", - 653862, - "+", - 681 - ] - ], - "md5": "ccae9ef7de30898cf3dacd456416dec8", - "parent_gene": "", - "protein_md5": "20f397a95735142ebb05825c6c566ddc", - "protein_translation": "MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARMMIERFKPGLILLDNYLPDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCGVFDYLIKPIAYERLGQTLTRFRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGIDPLTLNAVRKLFKEPGVQHTAETVAQALTISRTTARRYLEYCASRHLIIAEIVHGKVGRPQRIYHSG", - "protein_translation_length": 226, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0614" - ], - [ - "gene_synonym", - "JW0613" - ], - [ - "gene_synonym", - "GeneID:945000" - ], - [ - "gene_synonym", - "JW0616" - ], - [ - "gene_synonym", - "dcuC" - ], - [ - "gene_synonym", - "ASAP:ABE-0002133" - ], - [ - "gene_synonym", - "EcoGene:EG13545" - ], - [ - "gene_synonym", - "NP_415154.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABP3" - ], - [ - "gene_synonym", - "b0621" - ], - [ - "gene_synonym", - "GI:16128604" - ] - ], - "dna_sequence": "ATGCTGACATTCATTGAGCTCCTTATTGGGGTTGTGGTTATTGTGGGTGTAGCTCGCTACATCATTAAAGGGTATTCCGCCACTGGTGTGTTATTTGTCGGTGGCCTGTTATTGCTGATTATCAGTGCCATTATGGGGCACAAAGTGTTACCGTCCAGCCAGGCTTCAACAGGCTACAGCGCCACGGATATCGTTGAATACGTTAAAATATTACTAATGAGCCGCGGCGGCGACCTCGGCATGATGATTATGATGCTGTGTGGATTTGCCGCTTACATGACCCATATCGGCGCGAATGATATGGTGGTCAAGCTGGCGTCAAAACCATTGCAGTATATTAACTCCCCTTACCTGCTGATGATTGCCGCCTATTTTGTCGCCTGTCTGATGTCTCTGGCCGTCTCTTCCGCAACCGGTCTGGGTGTTTTGCTGATGGCAACCCTATTTCCGGTGATGGTAAACGTTGGTATCAGTCGTGGCGCAGCTGCTGCCATTTGTGCCTCCCCGGCGGCGATTATTCTCGCACCGACTTCAGGGGATGTGGTGCTGGCGGCGCAAGCTTCCGAAATGTCGCTGATTGACTTCGCCTTCAAAACGACGCTGCCTATCTCAATTGCTGCAATTATCGGCATGGCGATCGCCCACTTCTTCTGGCAACGTTATCTGGATAAAAAAGAGCACATCTCTCATGAAATGTTAGATGTCAGTGAAATCACCACCACTGCTCCTGCGTTTTATGCCATTTTGCCGTTCACGCCGATCATCGGTGTACTGATTTTTGACGGTAAATGGGGTCCGCAATTACACATCATCACTATTCTGGTGATTTGTATGCTGATTGCCTCCATTCTGGAGTTCCTCCGCAGCTTTAATACCCAGAAAGTTTTCTCTGGTCTGGAAGTGGCTTATCGCGGGATGGCAGATGCGTTTGCTAACGTGGTGATGCTGCTGGTTGCCGCTGGGGTATTCGCTCAGGGGCTTAGCACCATCGGCTTTATTCAAAGTCTGATTTCTATCGCTACCTCGTTTGGTTCGGCGAGTATCATCCTGATGCTGGTATTGGTGATTCTGACAATGCTGGCGGCAGTCACGACCGGTTCAGGCAATGCGCCGTTTTATGCGTTTGTTGAGATGATCCCGAAACTGGCGCACTCTTCCGGCATTAACCCGGCGTATTTGACTATCCCGATGCTGCAGGCGTCAAACCTTGGCCGTACCCTTTCGCCCGTTTCTGGCGTAGTCGTTGCGGTTGCCGGGATGGCGAAGATCTCGCCGTTTGAAGTCGTAAAACGCACCTCGGTACCGGTGCTTGTTGGTTTGGTGATTGTTATCGTTGCTACAGAGCTGATGGTGCCAGGAACGGCAGCAGCGGTCACAGGCAAGTAA", 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[ - "gene_synonym", - "pagP" - ], - [ - "gene_synonym", - "JW0617" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37001" - ], - [ - "gene_synonym", - "crcA" - ], - [ - "gene_synonym", - "ybeG" - ], - [ - "gene_synonym", - "NP_415155.1" - ], - [ - "gene_synonym", - "b0622" - ], - [ - "gene_synonym", - "GI:16128605" - ], - [ - "gene_synonym", - "ASAP:ABE-0002139" - ] - ], - "dna_sequence": "ATGAACGTGAGTAAATATGTCGCTATCTTTTCCTTTGTTTTTATTCAGTTAATCAGCGTTGGTAAAGTTTTTGCTAACGCAGATGAGTGGATGACAACGTTTAGAGAAAATATTGCACAAACCTGGCAACAGCCTGAACATTATGATTTATATATTCCTGCCATCACCTGGCATGCACGTTTCGCTTACGACAAAGAAAAAACCGATCGCTATAACGAGCGACCGTGGGGTGGCGGTTTTGGCCTGTCGCGTTGGGATGAAAAAGGAAACTGGCATGGCCTGTATGCCATGGCATTTAAGGACTCGTGGAACAAATGGGAACCGATTGCCGGATACGGATGGGAAAGTACCTGGCGACCGCTGGCGGATGAAAATTTTCATTTAGGTCTGGGATTCACCGCTGGCGTAACGGCACGCGATAACTGGAATTACATCCCTCTCCCGGTTCTACTGCCATTGGCCTCCGTGGGTTATGGCCCAGTGACTTTTCAGATGACCTACATTCCGGGTACCTACAACAATGGCAATGTGTACTTTGCCTGGATGCGCTTTCAGTTTTGA", - "dna_sequence_length": 561, - "functions": [ - "phospholipid:lipid A palmitoyltransferase" - ], - "id": "CDS_620", - "location": [ - [ - "NC_000913", - 656557, - "+", - 561 - ] - ], - "md5": "1067fbd71e433eab389bbdcf47352437", - "parent_gene": "", - "protein_md5": "b65498f9705bea4bcec8be014cad784c", - "protein_translation": "MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQF", - "protein_translation_length": 186, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "gicA" - ], - [ - "gene_synonym", - "JW0618" - ], - [ - "gene_synonym", - "GeneID:947024" - ], - [ - "gene_synonym", - "ECK0616" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A972" - ], - [ - "gene_synonym", - "NP_415156.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002142" - ], - [ - "gene_synonym", - "msmC" - ], - [ - "gene_synonym", - "EcoGene:EG12179" - ], - [ - "gene_synonym", - "cspE" - ], - [ - "gene_synonym", - "b0623" - ], - [ - "gene_synonym", - "GI:16128606" - ] - ], - "dna_sequence": "ATGTCTAAGATTAAAGGTAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAA", - "dna_sequence_length": 210, - "functions": [ - "constitutive cold shock family transcription antitermination protein", - "negative regulator of cspA transcription", - "RNA melting protein", - "ssDNA-binding protein" - ], - "id": "CDS_621", - "location": [ - [ - "NC_000913", - 657292, - "+", - 210 - ] - ], - "md5": "475f57e37991a2f8ce15eb5942e2c17f", - "parent_gene": "", - "protein_md5": "a681313ba1313404e2556ff70a8ea5db", - "protein_translation": "MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSAANVIAL", - "protein_translation_length": 69, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0619" - ], - [ - "gene_synonym", - "ECK0617" - ], - [ - "gene_synonym", - "fluC" - ], - [ - "gene_synonym", - "NP_415157.1" - ], - [ - "gene_synonym", - "GeneID:945798" - ], - [ - "gene_synonym", - "crcB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37002" - ], - [ - "gene_synonym", - "ASAP:ABE-0002144" - ], - [ - "gene_synonym", - "ybeI" - ], - [ - "gene_synonym", - "EcoGene:EG12209" - ], - [ - "gene_synonym", - "flc" - ], - [ - "gene_synonym", - "b0624" - ], - [ - "gene_synonym", - "GI:16128607" - ] - ], - "dna_sequence": "GTGTTACAACTTCTTTTAGCAGTTTTTATTGGCGGTGGTACGGGAAGCGTGGCGAGATGGCTGTTAAGTATGCGATTTAACCCACTGCATCAGGCGATTCCGTTGGGGACGCTGACAGCAAACCTGATTGGGGCATTCATCATAGGAATAGGATTCGCATGGTTCAGCAGGATGACGAACATTGATCCAGTGTGGAAAGTATTAATCACCACCGGATTTTGTGGCGGTCTAACAACCTTCTCAACATTTTCGGCAGAAGTGGTGTTTTTGTTACAAGAGGGCCGCTTTGGCTGGGCATTACTGAACGTTTTCGTCAACCTTCTGGGGTCTTTTGCCATGACCGCACTGGCATTCTGGCTGTTTTCGGCCTCAACCGCACACTAA", - "dna_sequence_length": 384, - "functions": [ - "fluoride efflux channel, dual topology membrane protein" - ], - "id": "CDS_622", - "location": [ - [ - "NC_000913", - 657938, - "-", - 384 - ] - ], - "md5": "72e153a0f9f52023b5b8ec077bbda8eb", - "parent_gene": "", - "protein_md5": "dcc113d0b7b928165e906748a9b87690", - "protein_translation": "MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLTANLIGAFIIGIGFAWFSRMTNIDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLNVFVNLLGSFAMTALAFWLFSASTAH", - "protein_translation_length": 127, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002150" - ], - [ - "gene_synonym", - "EcoGene:EG13162" - ], - [ - "gene_synonym", - "b4581" - ], - [ - "gene_synonym", - "ECK0618" - ], - [ - "gene_synonym", - "GeneID:4056041" - ], - [ - "gene_synonym", - "ybeM" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39874" - ], - [ - "gene_synonym", - "ybeH" - ], - [ - "gene_synonym", - "ASAP:ABE-0002148" - ], - [ - "gene_synonym", - "ASAP:ABE-0285113" - ], - [ - "gene_synonym", - "JW0620" - ] - ], - "dna_sequence": "ATGCTGGTTGCCGCAGGACAGTTTGCTGTTACATCTGTGTGGGAAAAGAACGCTGAGATTTGTGCCTCGTTGATGGCGCAGGCGGCGGAAAACGACGCATCGCTGTTTGCCCTGCCGGAAGCATTGCTGGCGCGCGATGATCATGATGCAGATCTATCGGTTAAATCAGCACAGCTGCTGGAAGGCGAATTCCTCCGGACTTTACGGCGAGAAAGTAAACGTAACATGATGACGACAATTCTGACGATTCATGTTCCTTCAACGCCGGGGCGCGCATGGAATATGCTGGTGGCACTTCAGGCAGGAAACATCGTCGCCCGTTATGCCAAACTGCATCTCTATGATGCATTTGCCATTCAGGAATCACGCCGTGTTGATGCTGGTAATGAAATCGCTCCGTTACTGGAGGTGGAAGGGATGAAGGTCGGTCTGATGACCTGTTATGACTTACGCTTTCCAGAGCTGGCGCTGGCACAGGCATTACAGGGAGCTGAAATCCTGGTACTTCCTGCCGCCTGGGTTCGCGGGCCGCTCAAAGAGCATCACTGGTCAACGTTGCTTGCCGCTCGTGCGCTGGATACCACCTGTTATATGGTGGCGGCGGGGGAGTGCGGGAACAAAAATATCGGTCAAAGCCGGATTATAGATCCCTTTGGCGTCACCATTGCGGCAGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTAAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGA", - "dna_sequence_length": 789, - "id": "CDS_623", - "location": [ - [ - "NC_000913", - 658031, - "+", - 195 - ], - [ - "NC_000913", - 658225, - "+", - 594 - ] - ], - "md5": "27b2a1acbaeb43e42b5b98f6fc5ea4ab", - "parent_gene": "", - "protein_md5": "dec3dbc95dbc877c4051326aaf39b599", - "protein_translation": "MLVAAGQFAVTSVWEKNAEICASLMAQAAENDASLFALPEALLARDDHDADLSVKSAQLLEGEFLRTLRRESKRNMMTTILTIHVPSTPGRAWNMLVALQAGNIVARYAKLHLYDAFAIQESRRVDAGNEIAPLLEVEGMKVGLMTCYDLRFPELALAQALQGAEILVLPAAWVRGPLKEHHWSTLLAARALDTTCYMVAAGECGNKNIGQSRIIDPFGVTIAAASEMPALIMAEVTPERVRQVRAQLPVLNNRRFAPPQLL", - "protein_translation_length": 262, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0620" - ], - [ - "gene_synonym", - "GI:16128610" - ], - [ - "gene_synonym", - "JW0622" - ], - [ - "gene_synonym", - "tatE" - ], - [ - "gene_synonym", - "GeneID:945228" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A843" - ], - [ - "gene_synonym", - "NP_415160.1" - ], - [ - "gene_synonym", - "b0627" - ], - [ - "gene_synonym", - "ybeC" - ], - [ - "gene_synonym", - "EcoGene:EG11305" - ], - [ - "gene_synonym", - "ASAP:ABE-0002153" - ] - ], - "dna_sequence": "ATGGGTGAGATTAGTATTACCAAACTGCTGGTAGTTGCGGCGCTGGTCGTTCTGCTGTTTGGGACTAAGAAGTTACGTACGCTGGGCGGAGACCTTGGAGCGGCCATTAAAGGGTTCAAGAAGGCGATGAATGATGACGATGCTGCGGCGAAAAAAGGCGCAGACGTTGATCTTCAGGCTGAAAAGCTCTCTCATAAAGAGTGA", - "dna_sequence_length": 204, - "functions": [ - "TatABCE protein translocation system subunit" - ], - "id": "CDS_624", - "location": [ - [ - "NC_000913", - 658947, - "+", - 204 - ] - ], - "md5": "5981f3d0ba3a5e3a258ae189633609aa", - "parent_gene": "", - "protein_md5": "2580a29ab0383932419deb2a2bdb7ef8", - "protein_translation": "MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMNDDDAAAKKGADVDLQAEKLSHKE", - "protein_translation_length": 67, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "lipA" - ], - [ - "gene_synonym", - "GeneID:945227" - ], - [ - "gene_synonym", - "ECK0621" - ], - [ - "gene_synonym", - "ASAP:ABE-0002155" - ], - [ - "gene_synonym", - "JW0623" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60716" - ], - [ - "gene_synonym", - "lip" - ], - [ - "gene_synonym", - "NP_415161.1" - ], - [ - "gene_synonym", - "b0628" - ], - [ - "gene_synonym", - "GI:16128611" - ], - [ - "gene_synonym", - "EcoGene:EG11306" - ] - ], - "dna_sequence": "ATGAGTAAACCCATTGTGATGGAACGCGGTGTTAAATACCGCGATGCCGATAAGATGGCCCTTATCCCGGTTAAAAACGTGGCAACAGAGCGCGAAGCCCTGCTGCGCAAGCCGGAATGGATGAAAATCAAGCTTCCAGCGGACTCTACACGTATCCAGGGCATCAAAGCCGCAATGCGCAAAAATGGCCTGCATTCTGTCTGCGAGGAAGCCTCCTGCCCTAACCTGGCGGAATGCTTCAACCACGGCACAGCAACGTTTATGATCCTCGGCGCTATTTGTACCCGCCGTTGTCCGTTCTGTGATGTTGCCCACGGTCGCCCGGTAGCTCCTGATGCCAATGAACCAGTGAAACTGGCGCAGACCATTGCCGATATGGCGCTGCGTTATGTGGTTATCACCTCCGTTGACCGTGATGACCTGCGCGATGGCGGTGCCCAGCACTTTGCGGATTGCATTACTGCCATTCGGGAAAAAAGCCCGCAAATCAAAATTGAAACTCTGGTGCCGGATTTCCGCGGTCGTATGGATCGTGCTCTGGATATTCTGACTGCAACGCCACCAGATGTGTTCAACCATAACCTGGAAAACGTACCGCGTATTTACCGTCAGGTACGGCCTGGTGCAGATTACAACTGGTCGCTGAAGCTGCTGGAACGCTTTAAAGAAGCGCATCCGGAAATCCCGACCAAGTCTGGTCTGATGGTGGGACTGGGTGAAACCAATGAAGAAATTATTGAGGTAATGCGCGACCTGCGCCGTCATGGTGTGACGATGTTAACGCTGGGGCAATATTTGCAGCCAAGCCGCCATCACCTGCCGGTTCAACGTTACGTTAGCCCGGATGAGTTCGACGAAATGAAAGCCGAAGCGCTGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAA", - "dna_sequence_length": 966, 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"gene_synonym", - "JW0624" - ], - [ - "gene_synonym", - "ybeF" - ], - [ - "gene_synonym", - "NP_415162.4" - ] - ], - "dna_sequence": "GTGGATAGTAATAATCAAATTGAACCCTGTTTAAGCAGAAAGTCGTCAGAAGGTAAACCACAAATATTTACAACCTTACGAAATATTGATCTTAACCTTCTGACTATTTTTGAAGCTGTATATGTACATAAAGGGATCGTTAATGCAGCGAAAGTGCTTAATCTGACCCCCTCGGCAATCAGTCAGTCTATTCAGAAACTGCGCGTTATATTCCCTGACCCATTGTTTATTCGCAAAGGCCAGGGTGTCACTCCTACCGCATTTGCGATGCATCTACATGAGTATATCAGTCAGGGCCTTGAGTCCATTCTTGGCGCGCTGGATATCGAAGGAAGCTATGATAAGCAACGAACGATAACTATTGCGACCACTCCCTCGGTCGGAGCACTGGTCCTTCCTGTCATCTATCGGGCGATTAAAACTCACTATCCGCAGCTTTTACTGCGCAACCCGCCCATCAGCGACGCGGAAAACCAACTCAGTCAGTTTCAAACCGATCTCATCATCGATAACATGTTTTGCACCAATCGTACGGTGCAACATCATGTTCTGTTCACCGACAATATGGTGTTAATTTGCCGCGAGGGAAATCCACTACTCTCTTTAGAAGATGACAGAGAGACTATCGACAACGCTGCGCATGTACTTCTGTTACCGGAAGAGCAAAATTTCAGCGGTCTGCGGCAGAGAGTTCAAGAAATGTTTCCGGACCGGCAAATCAATTTCACCAGCTACAACATTTTGACAATCGCTGCACTGGTTGCCAACAGTGACATGTTAGCGATTATTCCCAGCCGTTTTTATAACCTGTTTAGCCGCTGCTGGCCGCTGGAAAAACTGCCTTTTCCGTCCTTAAATGAGGAGCAAATAGATTTCTCTATCCACTACAACAAATTCAGCCTGCGTGATCCCATCCTGCACGGAGTAATAGATGTTATCCGTAATGCATTTTGA", - "dna_sequence_length": 954, - "functions": [ - "LysR family putative transcriptional regulator" - ], - "id": "CDS_626", - "location": [ - [ - "NC_000913", - 661378, - "-", - 954 - ] - ], - "md5": "ac8cbe33c17b2e19c7c169c99cccede5", - "parent_gene": "", - "protein_md5": "dfc3a58f52b18a50b0520aa3a72b51c5", - "protein_translation": "MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF", - "protein_translation_length": 317, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cde" - ], - [ - "gene_synonym", - "lipB" - ], - [ - "gene_synonym", - "NP_415163.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0002160" - ], - [ - "gene_synonym", - "ECK0623" - ], - [ - "gene_synonym", - "EcoGene:EG11591" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60720" - ], - [ - "gene_synonym", - "GI:90111156" - ], - [ - "gene_synonym", - "b0630" - ], - [ - "gene_synonym", - "GeneID:945217" - ], - [ - "gene_synonym", - "JW5089" - ] - ], - "dna_sequence": "TTGTATCAGGATAAAATTCTTGTCCGCCAGCTCGGTCTTCAGCCTTACGAGCCAATCTCCCAGGCTATGCATGAATTCACCGATACCCGCGATGATAGTACCCTTGATGAAATCTGGCTGGTCGAGCACTATCCGGTATTCACCCAAGGTCAGGCAGGAAAAGCGGAGCACATTTTAATGCCGGGTGATATTCCGGTGATCCAGAGCGATCGCGGTGGGCAGGTGACTTATCACGGGCCGGGGCAACAGGTGATGTATGTGTTGCTTAACCTGAAACGCCGTAAACTCGGTGTGCGTGAACTGGTGACCTTGCTTGAGCAAACAGTGGTGAATACCCTGGCTGAACTGGGTATAGAAGCGCATCCTCGGGCTGACGCGCCAGGTGTCTATGTTGGGGAAAAGAAAATTTGCTCACTGGGTTTACGTATTCGACGCGGTTGTTCATTCCACGGTCTGGCATTAAACGTCAATATGGATCTTTCACCATTTTTACGTATTAATCCTTGTGGGTATGCCGGAATGGAAATGGCTAAAATATCACAATGGAAACCCGAAGCGACGACTAATAATATTGCTCCACGTTTACTGGAAAATATTTTAGCGCTACTAAACAATCCGGACTTCGAATATATTACCGCTTAA", - "dna_sequence_length": 642, - "functions": [ - "octanoyltransferase", - "octanoyl-[ACP]:protein N-octanoyltransferase" - ], - "id": "CDS_627", - "location": [ - [ 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"ATGAAAACCAAACTTAACGAACTGCTTGAATTCCCTACTCCTTTTACTTACAAAGTTATGGGGCAGGCGTTACCTGAGCTGGTTGATCAGGTGGTTGAAGTGGTACAGCGCCATGCGCCAGGTGACTACACCCCAACGGTAAAACCAAGCAGCAAAGGCAACTACCACTCGGTATCTATCACTATCAACGCCACTCATATCGAGCAGGTTGAAACACTGTATGAAGAACTGGGCAAAATCGATATTGTCCGCATGGTTCTGTAA", - "dna_sequence_length": 264, - "functions": [ - "UPF0250 family protein" - ], - "id": "CDS_628", - "location": [ - [ - "NC_000913", - 662642, - "-", - 264 - ] - ], - "md5": "b76c381d54c60f82f1c1959ba4684cfa", - "parent_gene": "", - "protein_md5": "95df53110b4b0bff22f15b71a45ee620", - "protein_translation": "MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTPTVKPSSKGNYHSVSITINATHIEQVETLYEELGKIDIVRMVL", - "protein_translation_length": 87, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0625" - ], - [ - "gene_synonym", - "GeneID:945222" - ], - [ - "gene_synonym", - "dacA" - ], - [ - "gene_synonym", - "EcoGene:EG10201" - ], - [ - "gene_synonym", - "ASAP:ABE-0002168" - ], - [ - "gene_synonym", - "NP_415165.1" - ], - [ - "gene_synonym", - "JW0627" - ], - [ - "gene_synonym", - "pfv" - ], - [ - "gene_synonym", - "b0632" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEB2" - ], - [ - "gene_synonym", - "GI:16128615" - ] - ], - "dna_sequence": "ATGAATACCATTTTTTCCGCTCGTATCATGAAGCGCCTGGCGCTCACCACGGCTCTTTGCACAGCCTTTATCTCTGCTGCACATGCCGATGACCTGAATATCAAAACTATGATCCCGGGTGTACCGCAGATCGATGCGGAGTCCTACATCCTGATTGACTATAACTCCGGCAAAGTGCTCGCCGAACAGAACGCAGATGTCCGCCGCGATCCTGCCAGCCTGACCAAAATGATGACCAGTTACGTTATCGGCCAGGCAATGAAAGCCGGTAAATTTAAAGAAACTGATTTAGTCACTATCGGCAACGACGCATGGGCCACCGGTAACCCGGTGTTTAAAGGTTCTTCGCTGATGTTCCTCAAACCGGGCATGCAGGTTCCGGTTTCTCAGCTGATCCGCGGTATTAACCTGCAATCGGGTAACGATGCTTGTGTCGCCATGGCCGATTTTGCCGCTGGTAGCCAGGACGCTTTTGTTGGCTTGATGAACAGCTACGTTAACGCACTGGGCCTGAAAAATACCCACTTCCAGACGGTACATGGTCTGGATGCTGATGGTCAGTACAGCTCCGCGCGAGATATGGCGCTGATCGGCCAGGCATTGATCCGTGACGTACCGAATGAATACTCGATCTATAAAGAAAAAGAATTTACGTTTAACGGTATTCGCCAGCTGAACCGTAACGGCCTGTTATGGGATAACAGCCTGAATGTCGACGGCATCAAAACCGGACACACTGACAAAGCAGGTTACAACCTTGTTGCTTCTGCGACTGAAGGCCAGATGCGCTTGATTTCTGCGGTAATGGGCGGACGTACTTTTAAAGGCCGTGAAGCCGAAAGTAAAAAACTGCTAACCTGGGGCTTCCGTTTCTTTGAAACCGTTAACCCACTGAAAGTAGGTAAAGAGTTCGCCTCTGAACCGGTTTGGTTTGGTGATTCTGATCGCGCTTCGTTAGGGGTTGATAAAGACGTGTACCTGACCATTCCGCGTGGTCGCATGAAAGATCTGAAAGCCAGCTATGTGCTGAACAGCAGTGAATTGCATGCGCCGCTGCAAAAGAATCAGGTCGTCGGAACTATCAACTTCCAGCTTGATGGCAAAACGATCGAGCAACGCCCGCTGGTTGTGTTGCAAGAAATCCCGGAAGGTAACTTCTTCGGCAAAATCATTGATTACATTAAATTAATGTTCCATCACTGGTTTGGTTAA", 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"NP_415166.1" - ], - [ - "gene_synonym", - "EcoGene:EG10854" - ], - [ - "gene_synonym", - "ASAP:ABE-0002171" - ], - [ - "gene_synonym", - "GeneID:945241" - ], - [ - "gene_synonym", - "b0633" - ], - [ - "gene_synonym", - "GI:16128616" - ], - [ - "gene_synonym", - "rlpA" - ] - ], - "dna_sequence": "ATGCGTAAGCAGTGGCTCGGGATCTGCATCGCGGCAGGAATGCTCGCGGCATGTACAAGCGATGATGGTCAGCAACAGACGGTAAGTGTACCGCAGCCTGCGGTATGTAACGGCCCTATAGTTGAAATTAGCGGGGCGGACCCGCGTTTCGAACCACTGAACGCGACGGCAAATCAGGATTACCAGCGCGACGGTAAAAGCTACAAAATCGTGCAGGATCCGTCTCGATTTAGCCAGGCGGGACTGGCGGCAATCTATGATGCCGAACCCGGCAGTAACCTGACGGCCTCTGGCGAAGCATTCGATCCGACACAGCTGACGGCAGCCCATCCAACGCTTCCGATCCCCAGCTACGCCAGAATCACTAACCTGGCTAACGGGCGAATGATCGTGGTGCGCATTAATGATCGCGGCCCTTACGGCAACGACCGCGTTATTTCACTTTCTCGCGCGGCAGCTGACCGTCTTAACACGTCAAACAACACCAAAGTTCGTATCGATCCGATTATTGTTGCCCAGGATGGTTCGCTTTCTGGTCCTGGTATGGCTTGTACCACAGTCGCCAAACAGACTTACGCCCTGCCTGCACCTCCCGATTTAAGCGGTGGCGCGGGAACAAGTTCAGTGTCTGGCCCGCAGGGTGACATTCTTCCGGTCAGTAATTCGACGCTAAAAAGCGAAGATCCGACCGGCGCGCCGGTAACCAGTAGCGGTTTCCTCGGCGCACCAACGACCTTAGCGCCTGGTGTACTGGAAGGCAGCGAACCGACGCCTGCGCCACAGCCCGTTGTTACAGCTCCGTCGACAACGCCTGCAACCTCGCCTGCAATGGTGACACCGCAAGCCGTCTCGCAAAGCGCCAGCGGCAACTTTATGGTGCAAGTCGGGGCCGTAAGCGATCAGGCTCGTGCGCAACAGTACCAACAGCAACTGGGACAGAAGTTCGGCGTCCCCGGTCGCGTAACTCAAAATGGCGCGGTCTGGCGGATCCAGCTTGGCCCATTCGCCAGCAAAGCCGAAGCCAGTACCTTGCAGCAACGTTTGCAAACCGAAGCCCAATTACAGTCATTTATTACTACCGCGCAGTAG", 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], - [ - "gene_synonym", - "GeneID:945238" - ], - [ - "gene_synonym", - "mrdB" - ], - [ - "gene_synonym", - "JW0629" - ], - [ - "gene_synonym", - "b0634" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABG7" - ], - [ - "gene_synonym", - "GI:16128617" - ] - ], - "dna_sequence": "ATGACGGATAATCCGAATAAAAAAACATTCTGGGATAAAGTCCATCTCGATCCCACAATGCTGCTGATCTTACTGGCATTGCTGGTTTACAGCGCCCTGGTTATCTGGAGCGCCAGCGGTCAGGATATTGGCATGATGGAGCGTAAAATCGGCCAAATCGCGATGGGTCTGGTCATCATGGTGGTGATGGCGCAAATTCCTCCACGCGTTTATGAAGGCTGGGCCCCCTATCTCTATATCATCTGTATTATTTTGCTGGTGGCGGTAGATGCTTTCGGTGCCATCTCTAAAGGTGCTCAACGCTGGCTGGACCTCGGTATTGTTCGTTTTCAGCCGTCGGAAATTGCCAAAATAGCCGTACCACTGATGGTTGCGCGCTTTATCAACCGCGACGTTTGCCCGCCATCGTTGAAGAACACTGGCATCGCGCTGGTGCTGATATTTATGCCCACGCTGCTGGTGGCTGCACAGCCTGACCTGGGAACATCAATCCTCGTTGCGCTTTCCGGTCTGTTTGTACTGTTCCTCTCTGGCCTTAGCTGGCGTCTGATTGGCGTCGCAGTAGTGCTGGTAGCGGCGTTCATTCCGATTCTGTGGTTCTTCCTGATGCATGATTACCAGCGCCAGCGCGTAATGATGCTCCTGGACCCGGAATCAGACCCACTCGGCGCGGGCTATCACATTATTCAGTCTAAAATTGCTATTGGCTCCGGCGGATTACGCGGCAAAGGCTGGCTGCACGGCACTCAGTCACAGCTTGAATTTCTCCCCGAACGCCATACTGACTTTATCTTCGCGGTACTGGCGGAAGAGCTGGGATTAGTGGGCATTCTGATTCTGCTCGCTCTCTACATTCTGCTGATCATGCGCGGGCTGTGGATAGCCGCCAGAGCGCAAACCACCTTTGGTCGCGTCATGGCTGGCGGCTTAATGCTGATATTATTCGTTTATGTCTTCGTAAATATTGGTATGGTAAGCGGTATTCTGCCGGTTGTAGGGGTTCCGCTCCCACTGGTCAGTTATGGAGGATCGGCGCTAATTGTGCTGATGGCTGGGTTCGGGATTGTAATGTCAATCCACACCCACAGGAAAATGTTGTCGAAAAGCGTGTAA", 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- "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD65" - ], - [ - "gene_synonym", - "GI:16128618" - ], - [ - "gene_synonym", - "JW0630" - ], - [ - "gene_synonym", - "pbpA" - ], - [ - "gene_synonym", - "mrdA" - ], - [ - "gene_synonym", - "b0635" - ] - ], - "dna_sequence": "ATGAAACTACAGAACTCTTTTCGCGACTATACGGCAGAGTCCGCGCTGTTTGTGCGCCGGGCGCTGGTCGCCTTTTTGGGGATTTTGCTGCTGACCGGCGTGCTTATCGCCAACCTGTATAATCTGCAAATTGTTCGCTTTACCGACTACCAGACCCGCTCTAATGAAAACCGCATTAAGCTGGTGCCTATCGCGCCCAGCCGCGGCATTATCTACGATCGTAACGGTATCCCTCTGGCCCTCAACCGCACTATCTACCAGATAGAAATGATGCCGGAGAAAGTCGATAACGTGCAGCAAACGCTGGACGCTTTGCGCAGCGTGGTAGATCTGACCGATGACGATATTGCTGCATTCCGAAAAGAGCGCGCACGTTCACACCGTTTCACCTCTATTCCGGTGAAAACTAACCTGACCGAAGTACAAGTAGCTCGCTTTGCCGTCAATCAGTACCGTTTTCCGGGTGTCGAAGTTAAAGGCTATAAACGTCGTTACTATCCTTACGGTTCGGCGTTGACCCACGTCATCGGCTATGTGTCGAAAATCAACGATAAAGACGTCGAACGCCTGAATAATGACGGCAAACTGGCCAACTATGCGGCAACGCATGATATCGGTAAGCTGGGCATTGAGCGTTACTATGAAGATGTGCTGCACGGTCAGACCGGTTATGAAGAGGTTGAAGTTAACAACCGTGGGCGTGTTATTCGCCAGTTAAAAGAAGTACCACCGCAAGCCGGACACGATATTTACCTGACGCTGGATCTCAAACTCCAGCAATATATTGAAACGCTGCTGGCGGGTAGCCGCGCAGCTGTGGTAGTCACCGATCCGCGTACAGGTGGGGTGCTGGCGCTGGTTTCCACGCCTAGTTATGACCCAAACTTGTTTGTTGACGGTATCTCCAGCAAAGATTATTCCGCCTTGTTGAACGATCCGAATACACCGCTGGTGAACCGCGCCACACAGGGGGTTTATCCTCCCGCGTCTACAGTTAAACCCTATGTGGCGGTTTCGGCATTGAGCGCCGGGGTGATCACGCGCAATACGACGCTGTTTGACCCAGGCTGGTGGCAACTGCCAGGTTCGGAAAAACGTTATCGTGACTGGAAAAAATGGGGCCACGGGCGTCTGAATGTCACAAGATCGCTGGAAGAATCTGCGGATACCTTCTTCTATCAGGTGGCCTACGATATGGGGATCGATCGCCTCTCCGAATGGATGGGTAAATTCGGTTATGGTCATTACACCGGTATCGACCTGGCGGAAGAACGTTCCGGCAACATGCCTACCCGCGAATGGAAACAGAAACGCTTTAAAAAACCGTGGTATCAGGGTGACACCATTCCGGTTGGTATCGGTCAGGGTTACTGGACAGCGACCCCAATCCAGATGAGTAAGGCACTGATGATCCTGATTAATGACGGTATCGTGAAGGTTCCTCATTTGCTGATGAGCACCGCCGAAGACGGCAAACAGGTGCCATGGGTACAGCCGCATGAACCGCCCGTCGGCGATATTCATTCCGGTTACTGGGAGCTGGCGAAAGACGGTATGTACGGTGTTGCTAACCGCCCTAACGGTACGGCGCATAAATACTTTGCTAGCGCACCGTACAAAATTGCGGCGAAATCCGGTACCGCTCAGGTCTTCGGTCTGAAAGCGAACGAAACCTATAATGCGCACAAAATTGCCGAGCGTTTACGTGACCACAAACTGATGACCGCCTTTGCGCCATACAACAATCCGCAAGTGGCTGTCGCCATGATTCTGGAGAACGGTGGTGCGGGTCCGGCGGTTGGTACACTGATGCGCCAGATCCTCGACCACATTATGCTGGGTGATAACAACACCGATCTGCCTGCGGAAAATCCAGCGGTTGCCGCAGCGGAGGACCATTAA", 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"MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQIVRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTLDALRSVVDLTDDDIAAFRKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVSKINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFFYQVAYDMGIDRLSEWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIPVGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMSTAEDGKQVPWVQPHEPPVGDIHSGYWELAKDGMYGVANRPNGTAHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAERLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAVGTLMRQILDHIMLGDNNTDLPAENPAVAAAEDH", - "protein_translation_length": 633, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rlmH" - ], - [ - "gene_synonym", - "ASAP:ABE-0002180" - ], - [ - "gene_synonym", - "NP_415169.1" - ], - [ - "gene_synonym", - "ECK0629" - ], - [ - "gene_synonym", - "GI:16128619" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8I8" - ], - [ - "gene_synonym", - "JW0631" - ], - [ - "gene_synonym", - "EcoGene:EG11254" - ], - [ - "gene_synonym", - "GeneID:945239" - ], - [ - "gene_synonym", - "b0636" - ], - [ - "gene_synonym", - "ybeA" - ] - ], - "dna_sequence": "GTGAAGCTGCAACTTGTCGCCGTGGGAACGAAAATGCCGGACTGGGTACAAACCGGTTTTACCGAGTACCTGCGTCGTTTTCCGAAAGATATGCCCTTCGAGCTGATTGAAATTCCGGCCGGAAAACGCGGCAAGAATGCGGACATCAAGCGCATACTCGACAAAGAGGGTGAGCAGATGTTGGCGGCCGCAGGCAAAAACCGCATTGTCACCCTCGATATTCCAGGCAAGCCCTGGGATACGCCGCAGTTAGCCGCTGAGCTGGAACGCTGGAAGCTGGATGGTCGCGACGTCAGTCTACTGATTGGCGGGCCTGAAGGGTTGTCGCCTGCCTGTAAAGCGGCGGCTGAGCAGAGCTGGTCGCTGTCGGCGCTTACCCTCCCCCATCCGCTGGTTCGCGTGCTGGTCGCAGAGAGTCTGTACCGGGCGTGGAGCATCACCACCAACCATCCTTATCACCGTGAGTGA", - "dna_sequence_length": 468, - "functions": [ - "23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent" - ], - "id": "CDS_633", - "location": [ - [ - "NC_000913", - 668715, - "-", - 468 - ] - ], - "md5": "ea3cce419e80de0d79fdd6aa502601aa", - "parent_gene": "", - "protein_md5": "5fc3738261349ba33cb39af70226d356", - "protein_translation": "MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE", - "protein_translation_length": 155, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "slm3" - ], - [ - "gene_synonym", - "NP_415170.4" - ], - [ - "gene_synonym", - "ECK0630" - ], - [ - "gene_synonym", - "ASAP:ABE-0002183" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAT6" - ], - [ - "gene_synonym", - "rsfS" - ], - [ - "gene_synonym", - "GI:90111157" - ], - [ - "gene_synonym", - "JW5090" - ], - [ - "gene_synonym", - "EcoGene:EG11255" - ], - [ - "gene_synonym", - "GeneID:945237" - ], - [ - "gene_synonym", - "ybeB" - ], - [ - "gene_synonym", - "rsfA" - ], - [ - "gene_synonym", - "b0637" - ] - ], - "dna_sequence": "TTGCAGGGTAAAGCACTCCAGGATTTTGTTATCGACAAAATTGATGACCTCAAAGGTCAGGACATCATCGCCTTAGACGTTCAGGGCAAATCCAGCATCACCGACTGCATGATCATCTGTACGGGTACGTCCAGCCGTCATGTTATGTCCATTGCTGACCACGTTGTGCAGGAGTCTCGCGCAGCGGGCCTGTTACCGCTCGGCGTAGAAGGTGAAAACAGCGCCGACTGGATTGTCGTGGATTTGGGCGATGTGATTGTCCATGTCATGCAGGAAGAGAGCCGTCGCCTGTATGAACTGGAAAAACTCTGGAGTTAA", - "dna_sequence_length": 318, - "functions": [ - "ribosomal silencing factor" - ], - "id": "CDS_634", - "location": [ - [ - "NC_000913", - 669036, - "-", - 318 - ] - ], - "md5": "57dec0fe0410a318fe4aef54e19ae66f", - "parent_gene": "", - "protein_md5": "6721040d4f79d96c0e941789abf8c5bf", - "protein_translation": "MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEKLWS", - "protein_translation_length": 105, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13240" - ], - [ - "gene_synonym", - "ECK0631" - ], - [ - "gene_synonym", - "cobC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52086" - ], - [ - "gene_synonym", - "phpB" - ], - [ - "gene_synonym", - "b0638" - ], - [ - "gene_synonym", - "ASAP:ABE-0002185" - ], - [ - "gene_synonym", - "JW0633" - ], - [ - "gene_synonym", - "NP_415171.1" - ], - [ - "gene_synonym", - "GI:16128621" - ], - [ - "gene_synonym", - "GeneID:945246" - ] - ], - "dna_sequence": "ATGCGACTGTGGTTAATTCGTCATGGTGAAACGCAAGCGAATATCGATGGTCTTTACAGCGGTCATGCGCCCACCCCCCTGACCGCGCGCGGTATTGAGCAAGCGCAAAATCTGCATACGCTGCTACATGGTGTTTCCTTTGATCTGGTTTTATGCAGTGAACTGGAACGGGCACAGCATACCGCGCGACTGGTTCTCAGTGACCGCCAGCTCCCCGTGCAAATCATACCTGAACTCAACGAAATGTTTTTTGGCGACTGGGAGATGCGACATCATCGCGACCTCATGCAAGAAGATGCCGAAAACTATAGCGCGTGGTGCAATGACTGGCAGCATGCAATCCCCACGAACGGTGAAGGATTTCAGGCATTTTCGCAACGTGTGGAACGCTTTATCGCAAGGCTTAGTGAATTTCAGCACTATCAGAATATTTTAGTCGTCAGCCATCAGGGTGTACTGAGTCTGTTAATCGCCCGTTTAATTGGCATGCCTGCCGAAGCTATGTGGCATTTTCGCGTTGACCAGGGGTGTTGGAGCGCCATTGATATCAACCAAAAATTCGCGACGCTACGCGTCCTCAATAGCCGTGCCATCGGGGTCGAGAATGCATGA", - "dna_sequence_length": 612, - "functions": [ - "putative alpha-ribazole-5'-P phosphatase" - ], - "id": "CDS_635", - "location": [ - [ - "NC_000913", - 669907, - "-", - 612 - ] - ], - "md5": "42a1a2cf0e56d1f4642faa74a391f958", - "parent_gene": "", - "protein_md5": "7f7a8d3ef3b57e1918ac8a6bec189526", - "protein_translation": "MRLWLIRHGETQANIDGLYSGHAPTPLTARGIEQAQNLHTLLHGVSFDLVLCSELERAQHTARLVLSDRQLPVQIIPELNEMFFGDWEMRHHRDLMQEDAENYSAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSEFQHYQNILVVSHQGVLSLLIARLIGMPAEAMWHFRVDQGCWSAIDINQKFATLRVLNSRAIGVENA", - "protein_translation_length": 203, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ybeN" - ], - [ - "gene_synonym", - "EcoGene:EG13241" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A752" - ], - [ - "gene_synonym", - "ECK0632" - ], - [ - "gene_synonym", - "GeneID:945248" - ], - [ - "gene_synonym", - "ASAP:ABE-0002187" - ], - [ - "gene_synonym", - "nadD" - ], - [ - "gene_synonym", - "JW0634" - ], - [ - "gene_synonym", - "b0639" - ], - [ - "gene_synonym", - "fusB" - ], - [ - "gene_synonym", - "NP_415172.1" - ], - [ - "gene_synonym", - "GI:16128622" - ] - ], - "dna_sequence": "ATGAAATCTTTACAGGCTCTGTTTGGCGGCACCTTTGATCCGGTGCACTATGGTCATCTAAAACCCGTGGAAACGCTGGCGAATTTGATTGGTCTGACGCGGGTCACAATCATCCCTAATAATGTTCCTCCGCATCGTCCCCAGCCGGAAGCGAACAGCGTGCAGCGTAAACACATGCTTGAACTGGCGATTGCCGACAAGCCATTATTTACTCTTGATGAACGCGAGCTAAAGCGCAATGCCCCCTCTTACACTGCGCAAACACTGAAAGAGTGGCGGCAGGAACAAGGACCGGACGTGCCGCTGGCGTTTATTATTGGTCAGGATTCACTGCTGACCTTTCCGACCTGGTACGAATACGAAACGATACTCGACAATGCACATTTGATCGTCTGTCGGCGTCCAGGTTACCCACTTGAAATGGCGCAACCGCAATACCAGCAATGGCTGGAAGATCATTTGACACATAACCCGGAAGATCTTCACCTTCAGCCTGCCGGTAAAATTTATCTGGCTGAAACGCCGTGGTTTAACATCTCGGCGACCATCATCCGCGAACGTTTGCAAAACGGTGAATCATGTGAGGATTTATTGCCGGAACCGGTACTGACTTACATTAACCAACAAGGCTTGTATCGCTGA", - "dna_sequence_length": 642, - "functions": [ - "nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent" - ], - "id": "CDS_636", - "location": [ - [ - "NC_000913", - 670572, - "-", - 642 - ] - ], - "md5": "dfc40d3d2bf93dd21a0da80e947be761", - "parent_gene": "", - "protein_md5": "5b1d4e45bb80d6e0c2b893a43498207d", - "protein_translation": "MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQPEANSVQRKHMLELAIADKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNPEDLHLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLYR", - "protein_translation_length": 213, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947573" - ], - [ - "gene_synonym", - "ECK0633" - ], - [ - "gene_synonym", - "NP_415173.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002192" - ], - [ - "gene_synonym", - "b0640" - ], - [ - "gene_synonym", - "JW0635" - ], - [ - "gene_synonym", - "GI:16128623" - ], - [ - "gene_synonym", - "EcoGene:EG11412" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28630" - ], - [ - "gene_synonym", - "holA" - ] - ], - "dna_sequence": "ATGATTCGGTTGTACCCGGAACAACTCCGCGCGCAGCTCAATGAAGGGCTGCGCGCGGCGTATCTTTTACTTGGTAACGATCCTCTGTTATTGCAGGAAAGCCAGGACGCTGTTCGTCAGGTAGCTGCGGCACAAGGATTCGAAGAACACCACACTTTTTCCATTGATCCCAACACTGACTGGAATGCGATCTTTTCGTTATGCCAGGCTATGAGTCTGTTTGCCAGTCGACAAACGCTATTGCTGTTGTTACCAGAAAACGGACCGAATGCGGCGATCAATGAGCAACTTCTCACACTCACCGGACTTCTGCATGACGACCTGCTGTTGATCGTCCGCGGTAATAAATTAAGCAAAGCGCAAGAAAATGCCGCCTGGTTTACTGCGCTTGCGAATCGCAGCGTGCAGGTGACCTGTCAGACACCGGAGCAGGCTCAGCTTCCCCGCTGGGTTGCTGCGCGCGCAAAACAGCTCAACTTAGAACTGGATGACGCGGCAAATCAGGTGCTCTGCTACTGTTATGAAGGTAACCTGCTGGCGCTGGCTCAGGCACTGGAGCGTTTATCGCTGCTCTGGCCAGACGGCAAATTGACATTACCGCGCGTTGAACAGGCGGTGAATGATGCCGCGCATTTCACCCCTTTTCATTGGGTTGATGCTTTGTTGATGGGAAAAAGTAAGCGCGCATTGCATATTCTTCAGCAACTGCGTCTGGAAGGCAGCGAACCGGTTATTTTGTTGCGCACATTACAACGTGAACTGTTGTTACTGGTTAACCTGAAACGCCAGTCTGCCCATACGCCACTGCGTGCGTTGTTTGATAAGCATCGGGTATGGCAGAACCGCCGGGGCATGATGGGCGAGGCGTTAAATCGCTTAAGTCAGACGCAGTTACGTCAGGCCGTGCAACTCCTGACACGAACGGAACTCACCCTCAAACAAGATTACGGTCAGTCAGTGTGGGCAGAGCTGGAAGGGTTATCTCTTCTGTTGTGCCATAAACCCCTGGCGGACGTATTTATCGACGGTTGA", 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"JW0636" - ], - [ - "gene_synonym", - "NP_415174.1" - ], - [ - "gene_synonym", - "GeneID:946257" - ], - [ - "gene_synonym", - "GI:16128624" - ], - [ - "gene_synonym", - "lptE" - ], - [ - "gene_synonym", - "rlpB" - ] - ], - "dna_sequence": "GTGCGATATCTGGCAACATTGTTGTTATCTCTGGCGGTGTTAATCACCGCCGGGTGTGGCTGGCATCTGCGTGATACCACGCAGGTTCCTTCCACTATGAAGGTCATGATCCTGGACTCAGGCGATCCGAACGGGCCATTAAGCCGTGCGGTGCGTAACCAGTTACGTCTGAATGGTGTCGAGTTGCTTGATAAAGAAACCACGCGTAAGGACGTTCCATCCTTGCGTTTGGGTAAAGTGAGCATCGCGAAAGATACCGCATCGGTATTCCGTAACGGTCAAACAGCAGAGTATCAGATGATCATGACGGTTAATGCGACCGTGTTGATCCCCGGCCGTGATATCTACCCGATTAGCGCCAAAGTCTTCCGTTCGTTCTTCGATAACCCGCAAATGGCGTTAGCGAAAGATAACGAACAAGACATGATCGTAAAAGAGATGTACGACCGTGCTGCCGAACAGCTGATTCGTAAGCTGCCAAGCATCCGTGCTGCGGATATTCGTTCCGACGAAGAACAGACGTCGACCACAACGGATACTCCGGCAACGCCTGCACGCGTCTCCACCACGCTGGGTAACTGA", - "dna_sequence_length": 582, - "functions": [ - "LPS assembly OM complex LptDE, lipoprotein component" - ], - "id": "CDS_638", - "location": [ - [ - "NC_000913", - 672186, - "-", - 582 - ] - ], - "md5": "035c0b79640a28ab2719d0da8095d89d", - "parent_gene": "", - "protein_md5": "e7ec6a3e31a15a30f8d6904a026cdfe7", - "protein_translation": "MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPNGPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKVSIAKDTASVFRNGQTAEYQMIMTVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLPSIRAADIRSDEEQTSTTTDTPATPARVSTTLGN", - "protein_translation_length": 193, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0635" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07813" - ], - [ - "gene_synonym", - "NP_415175.1" - ], - [ - "gene_synonym", - "EcoGene:EG10532" - ], - [ - "gene_synonym", - "ASAP:ABE-0002196" - ], - [ - "gene_synonym", - "b0642" - ], - [ - "gene_synonym", - "GeneID:947497" - ], - [ - "gene_synonym", - "JW0637" - ], - [ - "gene_synonym", - "leuS" - ], - [ - "gene_synonym", - "GI:16128625" - ] - ], - "dna_sequence": "ATGCAAGAGCAATACCGCCCGGAAGAGATAGAATCCAAAGTACAGCTTCATTGGGATGAGAAGCGCACATTTGAAGTAACCGAAGACGAGAGCAAAGAGAAGTATTACTGCCTGTCTATGCTTCCCTATCCTTCTGGTCGACTACACATGGGCCACGTACGTAACTACACCATCGGTGACGTGATCGCCCGCTACCAGCGTATGCTGGGCAAAAACGTCCTGCAGCCGATCGGCTGGGACGCGTTTGGTCTGCCTGCGGAAGGCGCGGCGGTGAAAAACAACACCGCTCCGGCACCGTGGACGTACGACAACATCGCGTATATGAAAAACCAGCTCAAAATGCTGGGCTTTGGTTATGACTGGAGCCGCGAGCTGGCAACCTGTACGCCGGAATACTACCGTTGGGAACAGAAATTCTTCACCGAGCTGTATAAAAAAGGCCTGGTATATAAGAAGACTTCTGCGGTCAACTGGTGCCCGAACGACCAGACCGTACTGGCGAACGAACAAGTTATCGACGGCTGCTGCTGGCGCTGCGATACCAAAGTTGAACGTAAAGAGATCCCGCAGTGGTTTATCAAAATCACTGCTTACGCTGACGAGCTGCTCAACGATCTGGATAAACTGGATCACTGGCCAGACACCGTTAAAACCATGCAGCGTAACTGGATCGGTCGTTCCGAAGGCGTGGAGATCACCTTCAACGTTAACGACTATGACAACACGCTGACCGTTTACACTACCCGCCCGGACACCTTTATGGGTTGTACCTACCTGGCGGTAGCTGCGGGTCATCCGCTGGCGCAGAAAGCGGCGGAAAATAATCCTGAACTGGCGGCCTTTATTGACGAATGCCGTAACACCAAAGTTGCCGAAGCTGAAATGGCGACGATGGAGAAAAAAGGCGTCGATACTGGCTTTAAAGCGGTTCACCCATTAACGGGCGAAGAAATTCCCGTTTGGGCAGCAAACTTCGTATTGATGGAGTACGGCACGGGCGCAGTTATGGCGGTACCGGGGCACGACCAGCGCGACTACGAGTTTGCCTCTAAATACGGCCTGAACATCAAACCGGTTATCCTGGCAGCTGACGGCTCTGAGCCAGATCTTTCTCAGCAAGCCCTGACTGAAAAAGGCGTGCTGTTCAACTCTGGCGAGTTCAACGGTCTTGACCATGAAGCGGCCTTCAACGCCATCGCCGATAAACTGACTGCGATGGGCGTTGGCGAGCGTAAAGTGAACTACCGCCTGCGCGACTGGGGTGTTTCCCGTCAGCGTTACTGGGGCGCGCCGATTCCGATGGTGACGCTGGAAGACGGTACCGTAATGCCGACCCCGGACGACCAGCTGCCGGTGATCCTGCCGGAAGATGTGGTAATGGACGGCATTACCAGCCCGATTAAAGCAGATCCGGAGTGGGCGAAAACTACCGTTAACGGTATGCCAGCACTGCGTGAAACCGACACTTTCGACACCTTTATGGAGTCCTCCTGGTACTATGCGCGCTACACTTGCCCGCAGTACAAAGAAGGTATGCTGGATTCCGAAGCGGCTAACTACTGGCTGCCGGTGGATATCTACATTGGTGGTATTGAACACGCCATTATGCACCTGCTCTACTTCCGCTTCTTCCACAAACTGATGCGTGATGCAGGCATGGTGAACTCTGACGAACCAGCGAAACAGTTGCTGTGTCAGGGTATGGTGCTGGCAGATGCCTTCTACTATGTTGGCGAAAACGGCGAACGTAACTGGGTTTCCCCGGTTGATGCTATCGTTGAACGTGACGAGAAAGGCCGTATCGTGAAAGCGAAAGATGCGGCAGGCCATGAACTGGTTTATACCGGCATGAGCAAAATGTCCAAGTCGAAGAACAACGGTATCGACCCGCAGGTGATGGTTGAACGTTACGGCGCGGACACCGTTCGTCTGTTTATGATGTTTGCTTCTCCGGCTGATATGACTCTCGAATGGCAGGAATCCGGTGTGGAAGGGGCTAACCGCTTCCTGAAACGTGTCTGGAAACTGGTTTACGAGCACACAGCAAAAGGTGATGTTGCGGCACTGAACGTTGATGCGCTGACTGAAAATCAGAAAGCGCTGCGTCGCGATGTGCATAAAACGATCGCTAAAGTGACCGATGATATCGGCCGTCGTCAGACCTTCAACACCGCAATTGCGGCGATTATGGAGCTGATGAACAAACTGGCGAAAGCACCAACCGATGGCGAGCAGGATCGCGCTCTGATGCAGGAAGCACTGCTGGCCGTTGTCCGTATGCTTAACCCGTTCACCCCGCACATCTGCTTCACGCTGTGGCAGGAACTGAAAGGCGAAGGCGATATCGACAACGCGCCGTGGCCGGTTGCTGACGAAAAAGCGATGGTGGAAGACTCCACGCTGGTCGTGGTGCAGGTTAACGGTAAAGTCCGTGCCAAAATCACCGTTCCGGTGGACGCAACGGAAGAACAGGTTCGCGAACGTGCTGGCCAGGAACATCTGGTAGCAAAATATCTTGATGGCGTTACTGTACGTAAAGTGATTTACGTACCAGGTAAACTCCTCAATCTGGTCGTTGGCTAA", 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"MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCPNDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKTMQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNPELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQALTEKGVLFNSGEFNGLDHEAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQLPVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTFMESSWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTAKGDVAALNVDALTENQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAPTDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVEDSTLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLNLVVG", - "protein_translation_length": 860, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0636" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAT9" - ], - [ - "gene_synonym", - "ASAP:ABE-0002199" - ], - [ - "gene_synonym", - "EcoGene:EG12851" - ], - [ - "gene_synonym", - "b0643" - ], - [ - "gene_synonym", - "NP_415176.1" - ], - [ - "gene_synonym", - "ybeL" - ], - [ - "gene_synonym", - "GeneID:945252" - ], - [ - "gene_synonym", - "GI:16128626" - ], - [ - "gene_synonym", - "JW0638" - ] - ], - "dna_sequence": "ATGAACAAGGTTGCTCAATATTACCGTGAACTGGTTGCGTCACTGAGCGAACGCCTGCGCAATGGCGAACGTGATATCGACGCACTGGTGGAACAGGCGCGCGAGCGCGTAATAAAAACAGGGGAGTTAACGCGAACCGAGGTCGATGAGCTGACGCGAGCTGTCAGACGTGACCTGGAAGAGTTCGCCATGAGCTATGAAGAGAGCCTGAAAGAAGAATCTGACAGCGTCTTTATGCGGGTGATTAAAGAAAGCTTGTGGCAGGAGCTGGCAGACATCACCGATAAAACGCAGCTTGAATGGCGCGAAGTTTTCCAGGACCTCAATCATCATGGGGTTTATCACAGCGGAGAAGTGGTCGGGCTGGGAAATCTGGTCTGCGAGAAATGTCACTTCCATCTCCCGATCTACACACCGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAA", - "dna_sequence_length": 483, - "functions": [ - "DUF1451 family protein" - ], - "id": "CDS_640", - "location": [ - [ - "NC_000913", - 675018, - "+", - 483 - ] - ], - "md5": "a5c249de47936715ee3b09643b1a3ebb", - "parent_gene": "", - "protein_md5": "0754593e315c348cebd3f7d40cdf821f", - "protein_translation": "MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELTRTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWREVFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP", - "protein_translation_length": 160, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0637" - ], - [ - "gene_synonym", - "b0644" - ], - [ - "gene_synonym", - "ybeQ" - ], - [ - "gene_synonym", - "EcoGene:EG13647" - ], - [ - "gene_synonym", - "NP_415177.4" - ], - [ - "gene_synonym", - "JW5091" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77234" - ], - [ - "gene_synonym", - "ASAP:ABE-0002201" - ], - [ - "gene_synonym", - "GeneID:945251" - ], - [ - "gene_synonym", - "GI:90111158" - ] - ], - "dna_sequence": "ATGATTTTCACGTCAAGTTGCTGCGATAATTTATCAATAGATGAGATTATCGAACGTGCTGAAAAAGGCGATTGCGAGGCTCAATATATTGTTGGGTTTTATTATAATCGCGATAGCGCAATTGATTCTCCGGACGACGAAAAAGCCTTTTACTGGCTGAAGCTGGCCGCTGAGCAAGGTCATTGTGAAGCACAGTATTCCTTAGGGCAAAAGTATACCGAGGATAAAAGCCGTCATAAAGATAATGAGCAAGCCATCTTCTGGCTGAAAAAAGCTGCCCTACAAGGCCATACTTTCGCTTCCAACGCCCTTGGCTGGACACTGGATCGTGGAGAAGCCCCCAATTATAAAGAAGCGGTTGTCTGGTATCAGATAGCCGCGGAGAGCGGAATGTCTTATGCGCAAAATAATCTTGGGTGGATGTACAGAAATGGCAACGGAGTCGCAAAAGACTATGCGCTGGCATTTTTCTGGTACAAACAAGCTGCATTACAAGGCCATAGTGACGCGCAAAACAATCTGGCCGATCTTTATGAAGACGGAAAAGGCGTTGCTCAAAACAAGACACTCGCCGCATTCTGGTATTTGAAAAGCGCACAGCAGGGTAATCGGCACGCCCAGTTTCAAATTGCATGGGATTATAACGCTGGCGAAGGGGTGGACCAGGACTATAAGCAAGCGATGTACTGGTATCTGAAGGCTGCCGCTCAGGGGAGCGTCGGCGCTTACGTCAACATCGGTTATATGTATAAACACGGACAAGGCGTTGAGAAAGATTATCAGGCTGCCTTTGAATGGTTTACGAAAGCCGCTGAATGCAATGACGCCACTGCCTGGTATAACCTGGCCATTATGTATCACTACGGAGAAGGAAGACCTGTCGATCTCCGACAGGCTCTCGACCTGTATCGTAAAGTTCAGTCATCCGGAACCAGAGATGTCAGTCAGGAAATTCGTGAGACTGAAGATTTACTGTAG", - "dna_sequence_length": 978, - "functions": [ - "Sel1 family TPR-like repeat protein" - ], - "id": "CDS_641", - "location": [ - [ - "NC_000913", - 676547, - "-", - 978 - ] - ], - "md5": "239c1fc9e1b3103c6ba5d4f9c3aa0891", - "parent_gene": "", - "protein_md5": "13c99c912d729e56fb36e3029633cbc2", - "protein_translation": "MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTLDRGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEIRETEDLL", - "protein_translation_length": 325, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945249" - ], - [ - "gene_synonym", - "JW0640" - ], - [ - "gene_synonym", - "b0645" - ], - [ - "gene_synonym", - "ybeR" - ], - [ - "gene_synonym", - "ECK0638" - ], - [ - "gene_synonym", - "ASAP:ABE-0002208" - ], - [ - "gene_synonym", - "GI:16128628" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77627" - ], - [ - "gene_synonym", - "EcoGene:EG13648" - ], - [ - "gene_synonym", - "NP_415178.1" - ] - ], - "dna_sequence": "ATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGTACATGCTTTTTTGACCTTTCTTCCTCATGGGGAATTGATGACCGTGATGACCTGCTGCGCACAATTCACCGAATGATCGATAACGGTCATGCCGCTCGGTTGGCAGGGTTTTATCACCGCTGGTTTCGTTATTCGCCATGTGAATGGCGTGACTATCTTGCTGAACTAAATGAGCAAGGTCAGGCTTATGCGCAATTTGTCGCCAGCACCGCCGAATGCTGTGGCGAAGGGGGAATCAAAGCCTGGGATTATGTCCGGATGGGTTTTTTAAGCCGAATGGGCGTACTTAATAACTGGTTGAGCGAAGAAGAAAGTCTATGGATCCAGTCGCGCATTCATCTACGGGCTCTACGTTATTATAGTAACTGGCGGCAATACTTTGCCGGTTATACCTTTGGTCGGCAATATTGGCAGTCTCCCGAAGATGATCATCTGCCTTTATTACGCGAATTCTTAGCGCGTAAAGAATACGACGATTCCGGCAATGATATGTTTTATCAATTATTTGCCAGTGATGATGCGTATTACCCTACCTTGTCCTGGCAACCATTGGCTTACTATTCTGCATGCCCGGAAACGCTTAAGGATATGAGCGACCTATGA", - "dna_sequence_length": 708, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_642", - "location": [ - [ - "NC_000913", - 676711, - "+", - 708 - ] - ], - "md5": "e081c23b35e50e12a94795649530b6a5", - "parent_gene": "", - "protein_md5": "ab362db21b0f249709d100eb2f0b9908", - "protein_translation": "MDMESQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSSWGIDDRDDLLRTIHRMIDNGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFVASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQYFAGYTFGRQYWQSPEDDHLPLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQPLAYYSACPETLKDMSDL", - "protein_translation_length": 235, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0641" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77381" - ], - [ - "gene_synonym", - "GeneID:945245" - ], - [ - "gene_synonym", - "b0646" - ], - [ - "gene_synonym", - "ybeS" - ], - [ - "gene_synonym", - "ECK0639" - ], - [ - "gene_synonym", - "NP_415179.1" - ], - [ - "gene_synonym", - "GI:16128629" - ], - [ - "gene_synonym", - "ASAP:ABE-0002210" - ], - [ - "gene_synonym", - "djlB" - ], - [ - "gene_synonym", - "EcoGene:EG13649" - ] - ], - "dna_sequence": "ATGAAAAATTGCTGGAAGATCCTCGATATAGAGGAAACGACTGACGTCGATATTATCCGCCGCGCTTATCTGGCGCTGTTACCGTCCTTTCATCCAGAAACCGATCCGCAGGGTTTTAAACAACTTCGTCAGGCGTATGAGGAGGCGCTACGGATTGCGCAGTCGCCTGCTAAATCTGTTTGGCAACCAGAAGAATATGAGGTAGCAGAACATGAAATTCTGCTCGCCTTTCGTGCGTTACTTGCCTCTGATAGTGAACGTTTTCTGCCCTCCGCCTGGCAGCGATTCATTCAGCAATTAAATTATTGCTCGATGGAGGAGATTGATGAATTACGCTGGTCGCTGTGCACAATCGCCATGAACACTGCCCATTTATCCTTCGAGTGCGTGGTGTTATTAGCAGAAAGATTGCGGTGGTTACAGGAGGAAAATACCGGGGAAATAGACGAAGAAGAACTGGAATCCTTTTTATATGCCATTGCGAAGGGGAATGTTTTTAACTTCCAGACCATTCTGCATCTGCCCGTTGCCGTGCAAAATGACACCATCGATTTTTACCAAATGTTCGCTCGGATTTGGTCATCGCATCCACAATGGCTGACATTGTATTTAGCGCAACATCGCGCAGTGATTATCCCCGATGATGCAAAACTGCACAGAAATTTACTCCGCTGGTATAGCGCAGGTCGCCTGGATATCCCCGAACTTCTGGATTACGCCCAGTCATGGCGGGAAACTGAACCTGATAATGAAGATGCGCCTTATTATGAATACGCGCAACGCGTCTATTGTGGAGAAGGCGAAAGCCTGTTGGCAGAACTTTGTGACTACTGGCGCGAGTATCCCTCCACCCAGGCGGATGCTTTAATGTTGCAATGGTGCCGTCAGCATCGGGTCGATTATTACCCATTACTGGTGATGATGATTGAAGCGCGTGATCTGGTTAACGATCAGGGAAAACCGCTACTTTATGTCCCCGGCGACAGCGCCCGTACGCGTTTTCATTTATACGAAATACTCAGCGATGAAAAACTCTCTGCGCTGGGGCGTTCACTGGTCGAGATGGTTTTGCACAAAGGACGTAAGCCGCGGATCTCACTCACGCGTGATACAGAACATACCTTATGGCCATTATATCTAGTTGCCAAACAATTAGTGCAGGCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGCATCATTAAAATTATTTTCTATATTTTTATCTTTGCTGGTTTGATAGGGAAAATACTCCATCTGTTCGGGTGA", 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"JW0642" - ], - [ - "gene_synonym", - "ybeT" - ], - [ - "gene_synonym", - "NP_415180.1" - ], - [ - "gene_synonym", - "GI:16128630" - ], - [ - "gene_synonym", - "EcoGene:EG13650" - ], - [ - "gene_synonym", - "ECK0640" - ], - [ - "gene_synonym", - "ASAP:ABE-0002213" - ], - [ - "gene_synonym", - "GeneID:945243" - ], - [ - "gene_synonym", - "b0647" - ] - ], - "dna_sequence": "ATGAATAAAAAATTAATGTATATATTCGCAATTTTTATAGTTGCAGCAATTACCTGTATTAGCCAACCCAAGAAAACGACGTTGCGTGATAAAGCCATGGTGAATTATGCCTTTGATTATTTAAGCTCACCGGGCAGTCTTCCATTCACCACGGCAGCCACGGAGCTTTCCGCGATTCATGGTCACTCAACGTCGCAATATCGCCTTGGAGAATTTTATCTTCATGGTAGCGACGGTAAACCACTGGATTATACACAGGCGAGATACTGGTATGAGCAATCAGCGGAACAGGAAAATCCACGCGCGCAAAGTAAACTGGGGTGGATCTACCTCAAAGGTCTGGGGGTCAAACCCGACACCCGTAAAGCAATTCTCTGGTATAAGGAAGCAGCTGAACAAGGGTATGCTCATGCTCAATATACTTTAGGTTTGATCTACAGAAATGGCTCAGGTATTAATGTTAACCATTATGAATCTCAAAAATGGTTAAAACTGACCGCCAAACAACATTACAAAAATGCGGAAAGATTACTTGCCGGGCTTCCCGCACATTAA", - "dna_sequence_length": 555, - "functions": [ - "Sel1 family TPR-like repeat protein" - ], - "id": "CDS_644", - "location": [ - [ - "NC_000913", - 679406, - "-", - 555 - ] - ], - "md5": "57107a1963591612537c8b55ae9fc8a2", - "parent_gene": "", - "protein_md5": "6422895354a07641705e2f084092d184", - "protein_translation": "MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMVNYAFDYLSSPGSLPFTTAATELSAIHGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLTAKQHYKNAERLLAGLPAH", - "protein_translation_length": 184, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77427" - ], - [ - "gene_synonym", - "b0648" - ], - [ - "gene_synonym", - "JW0643" - ], - [ - "gene_synonym", - "ybeU" - ], - [ - "gene_synonym", - "GI:16128631" - ], - [ - "gene_synonym", - "ECK0641" - ], - [ - "gene_synonym", - "EcoGene:EG13651" - ], - [ - "gene_synonym", - "GeneID:945244" - ], - [ - "gene_synonym", - "ASAP:ABE-0002220" - ], - [ - "gene_synonym", - "NP_415181.1" - ] - ], - "dna_sequence": "ATGAATAAGGAAGAACAATATCTTCTTTTTGCGCTTTCTGCGCCCATGGAAATACTTAATCAGGGTTGCAAACCCGCGCATGACTCGCCAAAAATGTATACTGGGATAAAAGAATTCGAGCTCTCATCATCCTGGGGAATAAATAATCGTGATGATTTAATTCAGACTATTTATCAGATGACTGATGATGGTCATGCCAATGATTTAGCTGGCTTATATCTGACATGGCATCGCTCTTCCCCTGAAGAGTGGAAAGCATTAATTGCTGGTGGCTCGGAGAGAGGGTTGATTTATACCCAATTCGTTGCCCAAACCGCTATGTGCTGTGGGGAAGGGGGAATCAAAGCCTGGGATTATGTTCGAATGGGGTTTCTGTCACGGGTCGGTGTGCTCAACAAGTGGCTGACGGAAGAAGAGAGTTTATGGCTGCAATCGCGCGTCTATGTACGAGCTCACCATTACTATCACAGCTGGATGCACTATTTTTCCGCCTATTCGTTAGGACGTCTCTACTGGCAATCTTCTCAGTGCGAAGACAACACTTCGCTACGCGAGGCGCTAACCCTGTACAAATACGATAGCGCCGGGAGTCGTATGTTCGAAGAGCTGGCAGCGGGAAGCGATCGTTTCTATGCCACGCTTCCCTGGCAGCCATTAACTGTCCAGTCTGAATGCCCGGTAACGCTTAAGGATGTGAGCGACCTATGA", - "dna_sequence_length": 708, - "functions": [ - "DUF1266 family protein" - ], - "id": "CDS_645", - "location": [ - [ - "NC_000913", - 679508, - "+", - 708 - ] - ], - "md5": "1ec9baacabb994b073db04b81d84bd37", - "parent_gene": "", - "protein_md5": "c9de11f5a6cd99a2e901aae6b553e747", - "protein_translation": "MNKEEQYLLFALSAPMEILNQGCKPAHDSPKMYTGIKEFELSSSWGINNRDDLIQTIYQMTDDGHANDLAGLYLTWHRSSPEEWKALIAGGSERGLIYTQFVAQTAMCCGEGGIKAWDYVRMGFLSRVGVLNKWLTEEESLWLQSRVYVRAHHYYHSWMHYFSAYSLGRLYWQSSQCEDNTSLREALTLYKYDSAGSRMFEELAAGSDRFYATLPWQPLTVQSECPVTLKDVSDL", - "protein_translation_length": 235, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415182.1" - ], - [ - "gene_synonym", - "JW0644" - ], - [ - "gene_synonym", - "b0649" - ], - [ - "gene_synonym", - "hscD" - ], - [ - "gene_synonym", - "ybeV" - ], - [ - "gene_synonym", - "ECK0642" - ], - [ - "gene_synonym", - "EcoGene:EG13652" - ], - [ - "gene_synonym", - "GeneID:945253" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77359" - ], - [ - "gene_synonym", - "GI:16128632" - ], - [ - "gene_synonym", - "ASAP:ABE-0002222" - ], - [ - "gene_synonym", - "djlC" - ] - ], - "dna_sequence": "ATGAAAACATGTTGGCAAATCCTCGAAATTGAAAGCACGACGCAAATAGACATTATCCGCCAGGCTTATCTTGCTCGCTTACCGTTGTGTCATCCCGAAACCGATCCGCAAGGGTTTAAAGCATTACGCCAGGCCTATGAAGAGGCCCTGCGACTGGCGGTAAATCCTGTCGAGGAAGCAGATGATGAAGAAAAAGATGCTGCCGCTGAACATGAAATACTACGTGCATTCAGGACATTACTGGATTCAGAAAGTGATCGTTTTCAGCCTTCCGCCTGGCAGAAATTTATTCAGCAATTAAATACCTGGAACATGGAGGATGTCGATCAATTACGCTGGCCGCTGTGTGCAATCGCCATAGAAGCGCGATATCTTTCATTAAATTGTGCTTCTTTGCTGGCAGAGCGTTTGAACTGGCATTCATTTAATGACAGCGAAGGAATGGATGAGGAAGAAAGGGAGGCTTTTCTTGAGGCCATTCAGGCTGGTGATTGTTTCGATTTCCTTAGCCTTCTGGAATATCCCATTGCGTTGCAGAACCAGACTGTTGAGTATTACTTCGCGCTGGAACGTTGCTGCCGTTACCATCCTGACTATGTCACTGCGTTTTTGGCGATGGAAGGTCCGTGGTTAATTCCTGATGATGCAAAGTTACATCGCAAACTGTTGCGCTGGTACAGCTCGGTGCAAACAGGTATGGCGGAACTCATTCCTGTCGCTCAACAGTGGCAAACGGAAGAACCAGAAAGCGAAGATGCCCGGTATTACTTGTGTGCACAACGTTTGTACTGCGGCGAGGGGGAAAGCCTGCTTGCCGATCTCTGCGCGTACTGGGAAAGTTACCCATCTACACAAGCTGATAATTTGTTGTTGCAGTGGAGCAAGCGTCATTGCCCGGATTATTTCGCGTTATTAGTGATGGTTATCGAAGCGCGGAGCATGGTAGATGCGCAAGGTCAACCGCTGAAATATGTTCCTGGTGAGAGCGCCCGGACGCGGCTGTTATGGGCGGAGATTTTACATAGCGGAAAATTATCGCCGTTAGGTCAATCGTTTATTGAGTCGTTATTCTTCAAGCGCAAAGCATGGGCGTGGTGGAAATCGAGAGTCGGTAGCGAGACAGAGCAAGATTCACCGTTCCTGGATTTGTATCGGGTAGCGGAACAGGTAGTACTTGAAGCGTTTCCGAAACAAGAGATGCTGGCCCGTCTTAATACAAGGCTGGAAGGCGGAGATGCTCATCCATTAGAGGCCATTGTCACCCGGATGCTTTTGACGAAAGTGAAACTCGAGCCGGAGGATGAAGATGTCGATGAGCCAACACCTGAAAATCATGAAGAAAAAAATGATGAGGGTGAAAAACCACAGAGCATTACCAGCATTATCAAAATCAGTTTAACGGTGCTGGTGATAGGTTATGCTCTCGGCAAAATCGCGATGTTGTTTAGCTGA", - "dna_sequence_length": 1452, - "functions": [ - "J domain-containing HscC co-chaperone", - "Hsc56" - ], - "id": "CDS_646", - "location": [ - [ - "NC_000913", - 680212, - "+", - 1452 - ] - ], - "md5": "61a62e1a3879c8c674bd801e5b86d7b2", - "parent_gene": "", - "protein_md5": "a2ebcb0622bfd0f9178060d282d26751", - "protein_translation": "MKTCWQILEIESTTQIDIIRQAYLARLPLCHPETDPQGFKALRQAYEEALRLAVNPVEEADDEEKDAAAEHEILRAFRTLLDSESDRFQPSAWQKFIQQLNTWNMEDVDQLRWPLCAIAIEARYLSLNCASLLAERLNWHSFNDSEGMDEEEREAFLEAIQAGDCFDFLSLLEYPIALQNQTVEYYFALERCCRYHPDYVTAFLAMEGPWLIPDDAKLHRKLLRWYSSVQTGMAELIPVAQQWQTEEPESEDARYYLCAQRLYCGEGESLLADLCAYWESYPSTQADNLLLQWSKRHCPDYFALLVMVIEARSMVDAQGQPLKYVPGESARTRLLWAEILHSGKLSPLGQSFIESLFFKRKAWAWWKSRVGSETEQDSPFLDLYRVAEQVVLEAFPKQEMLARLNTRLEGGDAHPLEAIVTRMLLTKVKLEPEDEDVDEPTPENHEEKNDEGEKPQSITSIIKISLTVLVIGYALGKIAMLFS", - "protein_translation_length": 483, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0645" - ], - [ - "gene_synonym", - "hscC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77319" - ], - [ - "gene_synonym", - "GI:16128633" - ], - [ - "gene_synonym", - "ybeW" - ], - [ - "gene_synonym", - "NP_415183.1" - ], - [ - "gene_synonym", - "b0650" - ], - [ - "gene_synonym", - "ECK0643" - ], - [ - "gene_synonym", - "GeneID:945218" - ], - [ - "gene_synonym", - "EcoGene:EG13653" - ], - [ - "gene_synonym", - "ASAP:ABE-0002225" - ] - ], - "dna_sequence": "ATGGATAATGCAGAACTCGCCATTGGTATCGATCTCGGTACTACCAATAGTTTAATTGCCGTCTGGAAAGACGGTGCCGCGCAATTAATTCCAAATAAGTTCGGTGAATATTTAACACCATCCATAATTAGCATGGATGAAAATAATCATATTTTAGTCGGAAAACCGGCTGTATCACGGCGTACTTCGCATCCGGATAAAACGGCAGCGTTATTTAAACGTGCAATGGGCAGTAATACCAACTGGCGGTTAGGCAGCGACACATTTAACGCGCCAGAACTGTCCTCTTTGGTATTACGCTCATTAAAAGAAGATGCCGAAGAATTTCTGCAACGTCCGATTAAAGATGTGGTGATCTCCGTTCCGGCTTATTTCAGCGATGAACAACGCAAGCATACCCGTTTAGCAGCGGAGTTAGCCGGGTTAAATGCGGTACGCTTAATTAATGAACCCACAGCAGCTGCGATGGCGTATGGCCTGCATACCCAACAAAATACCCGTTCGCTGGTGTTTGATCTCGGTGGCGGCACGTTTGACGTTACGGTGCTTGAGTACGCCACGCCGGTGATTGAAGTTCACGCCTCCGCTGGCGACAACTTTCTTGGTGGCGAAGATTTTACCCATATGCTGGTCGATGAGGTTTTAAAACGCGCGGATGTCGCCAGGACCACGCTTAACGAGAGTGAACTGGCAGCCTTGTACGCCTGTGTGGAAGCGGCAAAATGTAGCAATCAATCGCCATTGCACATTCGCTGGCAGTATCAGGAAGAAACGCGGGAATGCGAATTTTACGAGAACGAACTGGAAGATTTGTGGTTGCCGCTGCTCAATCGCTTGCGAGTGCCGATTGAACAGGCGTTGCGCGATGCGCGTCTGAAGCCGAGTCAAATCGACAGTCTGGTGCTGGTTGGCGGCGCGTCACAAATGCCGCTGGTGCAGCGAATCGCCGTGCGTCTGTTTGGCAAATTACCGTATCAAAGTTACGATCCGAGCACCATTGTCGCGCTGGGCGCAGCAATCCAGGCCGCCTGCCGCTTACGCAGTGAAGATATTGAAGAGGTAATCCTCACTGATATTTGCCCTTACTCGTTGGGCGTTGAAGTTAACCGCCAGGGCGTTTCCGGCATTTTCTCGCCGATTATTGAACGAAACACCACTGTGCCCGTGTCGCGTGTAGAAACTTATTCAACCATGCACCCGGAACAGGATTCAATTACGGTTAACGTCTATCAGGGAGAAAACCACAAAGTTAAAAACAACATTCTGGTGGAATCCTTCGATGTGCCGTTGAAGAAAACCGGGGCTTATCAGTCGATTGATATTCGCTTTAGTTATGATATCAACGGGTTGCTTGAAGTTGACGTGCTTCTGGAAGACGGCAGCGTTAAGTCCAGAGTGATTAACCACAGCCCGGTAACATTGAGCGCGCAGCAGATTGAAGAGAGTCGGACGCGGTTATCCGCATTGAAAATTTATCCGCGCGATATGCTCATCAATCGCACCTTTAAAGCCAAACTGGAAGAGTTGTGGGCGCGGGCGCTGGGTGACGAGCGAGAAGAGATCGGCCGGGTGATCACCGATTTTGATGCGGCGTTGCAGTCAAACGATATGGCCCGCGTGGATGAAGTTCGGCGGCGGGCGAGCGATTATTTAGCCATTGAGATCCCATAA", - "dna_sequence_length": 1671, - "functions": [ - "Hsp70 family chaperone Hsc62", - "RpoD-binding transcription inhibitor" - ], - "id": "CDS_647", - "location": [ - [ - "NC_000913", - 683393, - "-", - 1671 - ] - ], - "md5": "3fdbf587c991c3e2bd6ef83271f9d245", - "parent_gene": "", - "protein_md5": "3ea0a65116f5f8eb4a5647ba84013bdc", - "protein_translation": "MDNAELAIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIISMDENNHILVGKPAVSRRTSHPDKTAALFKRAMGSNTNWRLGSDTFNAPELSSLVLRSLKEDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGLHTQQNTRSLVFDLGGGTFDVTVLEYATPVIEVHASAGDNFLGGEDFTHMLVDEVLKRADVARTTLNESELAALYACVEAAKCSNQSPLHIRWQYQEETRECEFYENELEDLWLPLLNRLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLPYQSYDPSTIVALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTVPVSRVETYSTMHPEQDSITVNVYQGENHKVKNNILVESFDVPLKKTGAYQSIDIRFSYDINGLLEVDVLLEDGSVKSRVINHSPVTLSAQQIEESRTRLSALKIYPRDMLINRTFKAKLEELWARALGDEREEIGRVITDFDAALQSNDMARVDEVRRRASDYLAIEIP", - "protein_translation_length": 556, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0646" - ], - [ - "gene_synonym", - "GI:16128634" - ], - [ - "gene_synonym", - "GeneID:945503" - ], - [ - "gene_synonym", - "b0651" - ], - [ - "gene_synonym", - "ybeK" - ], - [ - "gene_synonym", - "ECK0644" - ], - [ - "gene_synonym", - "ASAP:ABE-0002227" - ], - [ - "gene_synonym", - "rihA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P41409" - ], - [ - "gene_synonym", - "EcoGene:EG12701" - ], - [ - "gene_synonym", - "NP_415184.1" - ] - ], - "dna_sequence": "ATGGCACTGCCAATTCTGTTAGATTGCGACCCAGGTCATGACGACGCTATCGCAATAGTTCTCGCCCTCGCCTCACCAGAGCTTGATGTCAAAGCAATTACGTCTTCCGCCGGAAACCAGACACCAGAAAAAACCTTACGCAATGTTCTGCGTATGCTGACCTTGCTTAATCGCACCGATATTCCGGTAGCAGGCGGCGCGGTAAAACCGTTAATGCGTGAGTTGATTATCGCGGACAATGTGCACGGCGAAAGCGGTCTCGACGGCCCGGCATTACCGGAACCGACATTCGCACCGCAAAACTGTACGGCGGTAGAGCTGATGGCGAAAACGCTGCGTGAAAGTGCGGAACCTGTCACCATTGTGTCTACCGGACCGCAAACTAACGTTGCCTTGCTGCTCAATAGCCATCCGGAACTGCATAGCAAAATTGCCCGTATCGTGATTATGGGTGGCGCTATGGGGCTGGGTAACTGGACGCCTGCGGCTGAATTTAATATTTACGTTGACCCGGAAGCGGCAGAAATTGTCTTCCAGTCAGGGATCCCGGTGGTGATGGCCGGTCTGGATGTTACTCATAAAGCACAAATCCACGTTGAAGACACCGAGCGTTTCCGCGCGATTGGTAACCCTGTTTCAACCATTGTTGCCGAACTGCTGGATTTCTTCCTCGAATATCATAAAGACGAAAAATGGGGCTTTGTCGGCGCACCACTGCATGACCCATGCACCATCGCCTGGCTGTTGAAACCGGAGTTATTTACCTCTGTTGAGCGCTGGGTTGGCGTGGAAACACAGGGGAAATATACCCAGGGTATGACGGTTGTTGATTATTATTATCTGACAGGCAATAAACCGAATGCCACCGTAATGGTCGATGTTGATCGTCAGGGCTTTGTTGATTTACTGGCTGATCGTCTGAAATTTTACGCTTAA", - "dna_sequence_length": 936, - "functions": [ - "ribonucleoside hydrolase 1" - ], - "id": "CDS_648", - "location": [ - [ - "NC_000913", - 684412, - "-", - 936 - ] - ], - "md5": "d96ee9e9cf2ba5fbe54ab75501f25c20", - "parent_gene": "", - "protein_md5": "bca159193309a168039dcaf318718843", - "protein_translation": "MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTVVDYYYLTGNKPNATVMVDVDRQGFVDLLADRLKFYA", - "protein_translation_length": 311, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12663" - ], - [ - "gene_synonym", - "JW0647" - ], - [ - "gene_synonym", - "ASAP:ABE-0002232" - ], - [ - "gene_synonym", - "ECK0645" - ], - [ - "gene_synonym", - "b0652" - ], - [ - "gene_synonym", - "gltL" - ], - [ - "gene_synonym", - "GI:16128635" - ], - [ - "gene_synonym", - "NP_415185.1" - ], - [ - "gene_synonym", - "GeneID:945254" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAG3" - ] - ], - "dna_sequence": "ATGATTACCCTGAAAAATGTTTCAAAATGGTATGGTCACTTTCAGGTGCTGACCGACTGCTCAACCGAAGTGAAAAAAGGCGAAGTGGTGGTGGTTTGCGGCCCGTCTGGTTCCGGCAAATCAACGCTGATTAAAACCGTCAACGGCCTCGAACCGGTGCAGCAAGGTGAAATCACCGTCGATGGTATCGTGGTTAACGACAAGAAAACCGATCTGGCAAAGCTGCGTTCCCGCGTCGGGATGGTATTCCAGCATTTCGAGCTGTTCCCTCATCTGTCGATTATCGAAAACCTGACCCTGGCGCAGGTGAAAGTGCTTAAACGCGATAAAGCGCCGGCTCGTGAAAAAGCCCTGAAACTGCTGGAGCGTGTCGGGCTTTCTGCTCACGCCAATAAGTTTCCGGCGCAGCTTTCCGGCGGTCAGCAGCAGCGTGTGGCAATCGCTCGCGCGTTGTGTATGGATCCTATTGCGATGCTGTTTGACGAACCGACATCGGCGCTGGATCCGGAGATGATCAACGAAGTACTGGACGTGATGGTGGAACTGGCGAACGAAGGAATGACCATGATGGTGGTGACCCACGAAATGGGCTTTGCCCGTAAAGTGGCGAATCGGGTGATCTTTATGGACGAGGGTAAAATTGTCGAAGACTCGCCGAAAGACGCTTTCTTCGATGATCCGAAATCGGACCGCGCAAAAGACTTCCTCGCGAAAATCCTGCATTAA", - "dna_sequence_length": 726, - "functions": [ - "glutamate/aspartate ABC transporter ATPase" - ], - "id": "CDS_649", - "location": [ - [ - "NC_000913", - 685255, - "-", - 726 - ] - ], - "md5": "57190cbdfc84107336444b3f50a28ed9", - "parent_gene": "", - "protein_md5": "38cdb0dacca0e9d5add18020d599e6ed", - "protein_translation": "MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQVKVLKRDKAPAREKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSPKDAFFDDPKSDRAKDFLAKILH", - "protein_translation_length": 241, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12662" - ], - [ - "gene_synonym", - "ASAP:ABE-0002234" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AER5" - ], - [ - "gene_synonym", - "NP_415186.1" - ], - [ - "gene_synonym", - "b0653" - ], - [ - "gene_synonym", - "JW0648" - ], - [ - "gene_synonym", - "gltK" - ], - [ - "gene_synonym", - "GI:16128636" - ], - [ - "gene_synonym", - "GeneID:947354" - ], - [ - "gene_synonym", - "ECK0646" - ] - ], - "dna_sequence": "ATGTACGAGTTTGACTGGAGTTCCATTGTCCCTTCCCTGCCATATCTGCTCGACGGGCTGGTGATCACCCTGAAAATCACCGTCACGGCGGTAGTGATTGGTATTTTGTGGGGCACGATGCTGGCGGTGATGCGTTTATCCAGCTTTGCGCCCGTGGCGTGGTTTGCCAAAGCCTACGTTAACGTATTCCGCTCGATTCCTTTAGTTATGGTTTTGCTGTGGTTTTACCTGATCGTGCCGGGTTTTCTGCAAAACGTGCTGGGATTATCGCCAAAAAATGATATCCGTTTAATTTCGGCGATGGTGGCGTTTTCGATGTTTGAAGCGGCCTACTATTCAGAGATTATCCGTGCTGGTATTCAAAGTATTTCTCGTGGTCAATCGAGCGCCGCGCTGGCGTTGGGAATGACTCACTGGCAGTCGATGAAACTGATTATTCTGCCGCAGGCGTTCCGCGCGATGGTGCCGCTGCTGCTCACTCAGGGCATCGTACTGTTCCAGGATACCTCACTGGTGTATGTGTTATCCCTGGCCGATTTCTTCCGTACCGCCTCAACCATTGGTGAGCGTGATGGTACGCAGGTTGAGATGATCCTGTTTGCCGGATTTGTTTATTTCGTTATTAGTCTTAGCGCGTCGTTGTTGGTCAGCTACTTGAAAAGAAGGACAGCATAA", - "dna_sequence_length": 675, - "functions": [ - "glutamate/aspartate ABC transporter permease" - ], - "id": "CDS_650", - "location": [ - [ - "NC_000913", - 685929, - "-", - 675 - ] - ], - "md5": "579ef05c809414fc8eb5756aa60fd41b", - "parent_gene": "", - "protein_md5": "4eff4b7ee0ad58011f2270ddd618bc6a", - "protein_translation": "MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA", - "protein_translation_length": 224, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12661" - ], - [ - "gene_synonym", - "GeneID:945443" - ], - [ - "gene_synonym", - "ASAP:ABE-0002239" - ], - [ - "gene_synonym", - "NP_415187.1" - ], - [ - "gene_synonym", - "b0654" - ], - [ - "gene_synonym", - "JW0649" - ], - [ - "gene_synonym", - "gltJ" - ], - [ - "gene_synonym", - "ECK0647" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AER3" - ], - [ - "gene_synonym", - "GI:16128637" - ] - ], - "dna_sequence": "ATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAACACCACCTATCTTGGTTGGATCTGGAGTGGTTTTCAGGTGACGATCGCTTTGTCGATCTGCGCCTGGATTATCGCTTTCCTCGTCGGTTCATTTTTCGGCATTTTACGTACCGTTCCAAACCGTTTTCTCTCTGGTCTGGGTACGTTGTATGTCGAACTGTTCCGCAACGTGCCGTTGATTGTGCAATTCTTTACCTGGTATCTGGTGATCCCGGAGCTGCTGCCGGAGAAAATCGGCATGTGGTTTAAGGCCGAGCTGGATCCCAATATTCAGTTTTTCCTTTCATCCATGCTCTGCCTGGGGCTGTTTACCGCCGCCCGTGTTTGCGAACAGGTACGCGCCGCGATTCAGTCGCTGCCGCGAGGGCAAAAAAATGCCGCGCTGGCGATGGGCCTGACGCTACCGCAGGCTTATCGATACGTACTGCTGCCTAATGCTTATCGCGTTATCGTCCCGCCGATGACCTCAGAGATGATGAACCTGGTGAAAAACTCCGCCATCGCCTCGACTATCGGTCTGGTGGATATGGCGGCGCAGGCGGGTAAATTGCTCGATTACTCAGCCCATGCCTGGGAGTCGTTTACCGCCATTACGCTGGCGTATGTGTTGATTAACGCTTTTATCATGCTGGTGATGACGCTGGTTGAACGTAAAGTTCGCCTGCCTGGCAACATGGGGGGCAAATAA", - "dna_sequence_length": 741, - "functions": [ - "glutamate/aspartate ABC transporter permease" - ], - "id": "CDS_651", - "location": [ - [ - "NC_000913", - 686669, - "-", - 741 - ] - ], - "md5": "036a890280cc1e10e69343518476d420", - "parent_gene": "", - "protein_md5": "bc349f7f8df2734ffd8537ed0b956f81", - "protein_translation": "MSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMTLVERKVRLPGNMGGK", - "protein_translation_length": 246, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37902" - ], - [ - "gene_synonym", - "ASAP:ABE-0002241" - ], - [ - "gene_synonym", - "GI:16128638" - ], - [ - "gene_synonym", - "b0655" - ], - [ - "gene_synonym", - "EcoGene:EG12700" - ], - [ - "gene_synonym", - "gltI" - ], - [ - "gene_synonym", - "JW5092" - ], - [ - "gene_synonym", - "ybeJ" - ], - [ - "gene_synonym", - "yzzK" - ], - [ - "gene_synonym", - "ECK0648" - ], - [ - "gene_synonym", - "NP_415188.1" - ], - [ - "gene_synonym", - "GeneID:946938" - ] - ], - "dna_sequence": "ATGCAATTACGTAAACCTGCCACAGCAATCCTCGCCCTGGCGCTTTCCGCAGGACTGGCACAGGCAGATGACGCCGCCCCGGCAGCGGGCAGTACTCTGGACAAAATCGCCAAAAACGGTGTGATTGTCGTCGGTCACCGTGAATCTTCAGTGCCTTTCTCTTATTACGACAATCAGCAAAAAGTGGTGGGTTACTCGCAGGATTACTCCAACGCCATTGTTGAAGCAGTGAAAAAGAAACTCAACAAACCGGACTTGCAGGTAAAACTGATTCCGATTACCTCACAAAACCGTATTCCACTGCTGCAAAACGGCACTTTCGATTTTGAATGTGGTTCTACCACCAACAACGTCGAACGCCAAAAACAGGCGGCTTTCTCTGACACTATTTTCGTGGTCGGTACGCGCCTGTTGACCAAAAAGGGTGGCGATATCAAAGATTTTGCCAACCTGAAAGACAAAGCCGTAGTCGTCACTTCCGGCACTACCTCTGAAGTTTTGCTCAACAAACTGAATGAAGAGCAAAAAATGAATATGCGCATCATCAGCGCCAAAGATCACGGTGACTCTTTCCGCACCCTGGAAAGCGGTCGTGCCGTTGCCTTTATGATGGATGACGCTCTGCTGGCCGGTGAACGTGCGAAAGCGAAGAAACCAGACAACTGGGAAATCGTCGGCAAGCCGCAGTCTCAGGAGGCCTACGGTTGTATGTTGCGTAAAGATGATCCGCAGTTCAAAAAGCTGATGGATGACACCATCGCTCAGGTGCAGACCTCCGGTGAAGCGGAAAAATGGTTTGATAAGTGGTTCAAAAATCCAATTCCGCCGAAAAACCTGAACATGAATTTCGAACTGTCAGACGAAATGAAAGCACTGTTCAAAGAACCGAATGACAAGGCACTGAACTAA", - "dna_sequence_length": 909, - "functions": [ - "glutamate/aspartate periplasmic binding protein" - ], - "id": "CDS_652", - "location": [ - [ - "NC_000913", - 687747, - "-", - 909 - ] - ], - "md5": "523aaca0bf99e237e1e1657a832c1614", - "parent_gene": "", - "protein_md5": "96a76a6b7f10633ef525f2784214ee48", - "protein_translation": "MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVVGHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLLQNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGDIKDFANLKDKAVVVTSGTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDNWEIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIPPKNLNMNFELSDEMKALFKEPNDKALN", - "protein_translation_length": 302, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002246" - ], - [ - "gene_synonym", - "EcoGene:EG40008" - ], - [ - "gene_synonym", - "NP_415189.1" - ], - [ - "gene_synonym", - "b0656" - ], - [ - "gene_synonym", - "GeneID:944917" - ], - [ - "gene_synonym", - "insH1" - ], - [ - "gene_synonym", - "GI:16128639" - ], - [ - "gene_synonym", - "ECK0261" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CE51" - ] - ], - "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", - "dna_sequence_length": 1017, - "functions": [ - "IS5 transposase and trans-activator" - ], - "id": "CDS_653", - "location": [ - [ - "NC_000913", - 689013, - "-", - 1017 - ] - ], - "md5": "59571096a52db4971db033e04651ef59", - "parent_gene": "", - "protein_md5": "75d20978a034ac97cbf88235b32b7ad9", - "protein_translation": "MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", - "protein_translation_length": 338, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cutE" - ], - [ - "gene_synonym", - "JW0654" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23930" - ], - [ - "gene_synonym", - "ASAP:ABE-0002250" - ], - [ - "gene_synonym", - "lnt" - ], - [ - "gene_synonym", - "GI:16128640" - ], - [ - "gene_synonym", - "GeneID:946201" - ], - [ - "gene_synonym", - "EcoGene:EG10168" - ], - [ - "gene_synonym", - "b0657" - ], - [ - "gene_synonym", - "NP_415190.1" - ], - [ - "gene_synonym", - "ECK0649" - ] - ], - "dna_sequence": "ATGGCTTTTGCCTCATTAATTGAACGCCAGCGCATTCGCCTGCTGCTGGCGTTATTATTCGGTGCCTGCGGAACGCTGGCCTTCTCTCCTTACGACGTCTGGCCTGCGGCGATTATTTCGCTGATGGGGCTTCAGGCGTTGACCTTTAACCGCCGTCCACTCCAGTCTGCCGCTATTGGCTTTTGCTGGGGATTTGGCCTCTTTGGCAGCGGTATTAACTGGGTCTATGTCAGCATCGCGACCTTTGGCGGAATGCCTGGCCCGGTTAACATCTTCCTGGTGGTGCTGCTGGCGGCGTATTTGTCGCTGTATACCGGACTGTTTGCTGGCGTGCTGTCGCGTCTGTGGCCGAAAACCACCTGGCTGCGCGTAGCGATTGCCGCCCCTGCCCTCTGGCAAGTGACCGAGTTTCTGCGCGGTTGGGTACTGACCGGCTTCCCGTGGTTACAGTTCGGCTATAGCCAGATTGATGGCCCGTTAAAAGGGCTGGCACCGATAATGGGCGTGGAAGCCATTAACTTCCTGCTGATGATGGTTAGTGGCCTGCTGGCACTGGCGTTGGTCAAACGCAACTGGCGTCCGCTGGTGGTGGCCGTCGTGCTGTTTGCCCTTCCCTTCCCGCTGCGTTACATCCAGTGGTTTACCCCACAACCGGAGAAAACCATTCAGGTTTCGATGGTTCAGGGCGATATTCCGCAATCGCTGAAATGGGACGAAGGCCAGCTTCTTAATACGCTGAAGATTTACTACAACGCAACGGCACCGCTGATGGGCAAATCATCGTTGATTATCTGGCCGGAGTCGGCGATAACCGATCTGGAAATTAATCAGCAACCGTTCCTCAAAGCACTGGACGGTGAGTTGCGTGATAAAGGTAGCTCGCTGGTAACCGGGATTGTCGACGCGCGTCTCAATAAGCAGAACCGCTACGATACCTACAACACCATCATCACGCTGGGTAAAGGTGCGCCGTACAGCTACGAATCAGCCGATCGCTATAACAAAAACCATCTGGTGCCGTTTGGCGAGTTTGTCCCGCTGGAGTCGATTCTGCGTCCGTTAGCACCGTTCTTTGATCTGCCGATGTCGTCGTTCAGCCGTGGGCCATATATCCAGCCGCCGCTGTCGGCAAATGGTATTGAGCTTACTGCGGCTATTTGCTACGAGATCATTCTCGGCGAGCAAGTGCGCGATAACTTCCGCCCGGATACCGACTATCTGCTGACTATCTCCAACGATGCGTGGTTTGGTAAATCTATTGGTCCATGGCAACACTTCCAGATGGCGCGAATGCGTGCGCTGGAGCTGGCGCGCCCACTGTTGCGCAGCACCAACAACGGCATTACGGCGGTGATTGGCCCGCAGGGTGAGATTCAGGCGATGATCCCGCAGTTCACCCGCGAGGTGTTAACCACTAACGTGACGCCGACCACCGGACTCACACCATACGCACGTACCGGCAACTGGCCGCTGTGGGTGCTGACGGCATTGTTTGGTTTTGCTGCTGTGTTGATGAGTCTGCGTCAGCGACGTAAATAA", - "dna_sequence_length": 1539, - "functions": [ - "apolipoprotein N-acyltransferase" - ], - "id": "CDS_654", - "location": [ - [ - "NC_000913", - 690881, - "-", - 1539 - ] - ], - "md5": "5f3366ca8adba3c37d12ff66b055d22c", - "parent_gene": "", - "protein_md5": "0b6ffb4b5e917e71815fd78b961f8398", - "protein_translation": "MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGLQALTFNRRPLQSAAIGFCWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVLLAAYLSLYTGLFAGVLSRLWPKTTWLRVAIAAPALWQVTEFLRGWVLTGFPWLQFGYSQIDGPLKGLAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQPEKTIQVSMVQGDIPQSLKWDEGQLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEINQQPFLKALDGELRDKGSSLVTGIVDARLNKQNRYDTYNTIITLGKGAPYSYESADRYNKNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPPLSANGIELTAAICYEIILGEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRALELARPLLRSTNNGITAVIGPQGEIQAMIPQFTREVLTTNVTPTTGLTPYARTGNWPLWVLTALFGFAAVLMSLRQRRK", - "protein_translation_length": 512, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0655" - ], - [ - "gene_synonym", - "ybeX" - ], - [ - "gene_synonym", - "b0658" - ], - [ - "gene_synonym", - "corC" - ], - [ - "gene_synonym", - "NP_415191.1" - ], - [ - "gene_synonym", - "EcoGene:EG13654" - ], - [ - "gene_synonym", - "GeneID:946417" - ], - [ - "gene_synonym", - "ECK0650" - ], - [ - "gene_synonym", - "GI:16128641" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE78" - ], - [ - "gene_synonym", - "ASAP:ABE-0002252" - ] - ], - "dna_sequence": "ATGAGCGACGACAATTCACACAGTAGTGACACGATAAGCAACAAGAAGGGATTTTTCTCCCTGTTACTCAGCCAACTTTTCCACGGTGAACCGAAAAACCGTGACGAACTGCTGGCGCTGATCCGTGATTCCGGGCAGAACGACCTTATCGACGAAGATACGCGCGATATGCTCGAAGGGGTGATGGACATCGCAGACCAACGCGTTCGCGACATCATGATCCCCCGCTCCCAGATGATTACCCTGAAACGCAACCAGACGCTGGACGAATGTCTTGATGTCATCATCGAGTCCGCCCACTCACGTTTCCCGGTGATTAGCGAAGACAAAGATCACATTGAAGGGATTCTGATGGCGAAAGACTTGCTGCCGTTTATGCGCAGCGATGCTGAAGCCTTCAGCATGGACAAAGTGTTACGTCAGGCGGTTGTCGTTCCTGAAAGTAAGCGCGTAGACCGGATGCTGAAAGAGTTTCGCTCTCAGCGTTACCACATGGCGATCGTTATTGACGAATTCGGTGGGGTTTCCGGTCTGGTGACCATTGAAGACATCCTGGAACTGATTGTTGGTGAGATTGAAGACGAGTATGACGAAGAAGATGATATCGACTTCCGTCAGCTGAGTCGTCATACCTGGACCGTACGCGCACTGGCTTCCATTGAAGACTTCAACGAAGCGTTCGGCACCCACTTTAGCGATGAAGAAGTCGACACTATCGGTGGTCTGGTGATGCAGGCATTTGGGCATCTTCCGGCGCGTGGCGAAACTATCGACATCGACGGTTACCAGTTCAAAGTGGCGATGGCCGACAGTCGGCGTATTATTCAGGTTCATGTCAAAATCCCGGATGACTCACCCCAGCCGAAGCTGGATGAATAA", - "dna_sequence_length": 879, - "functions": [ - "putative ion transport" - ], - "id": "CDS_655", - "location": [ - [ - "NC_000913", - 691784, - "-", - 879 - ] - ], - "md5": "51d2438671a4285a23d7725fcbe34fa9", - "parent_gene": "", - "protein_md5": "1bc1abec4cdd9bfda2cc56666581251f", - "protein_translation": "MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDSGQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALASIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQVHVKIPDDSPQPKLDE", - "protein_translation_length": 292, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0656" - ], - [ - "gene_synonym", - "ASAP:ABE-0002255" - ], - [ - "gene_synonym", - "b0659" - ], - [ - "gene_synonym", - "ybeY" - ], - [ - "gene_synonym", - "EcoGene:EG13655" - ], - [ - "gene_synonym", - "GeneID:946430" - ], - [ - "gene_synonym", - "ECK0651" - ], - [ - "gene_synonym", - "GI:16128642" - ], - [ - "gene_synonym", - "NP_415192.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A898" - ] - ], - "dna_sequence": "ATGAGTCAGGTGATCCTCGATTTACAACTGGCATGTGAAGATAATTCCGGGTTACCGGAAGAGAGCCAGTTTCAGACATGGCTGAATGCGGTGATCCCGCAGTTTCAGGAAGAATCGGAAGTGACGATTCGCGTGGTCGATACCGCCGAAAGCCACAGTCTGAATCTGACCTATCGCGGTAAGGATAAGCCGACCAACGTGCTCTCCTTCCCGTTTGAAGTGCCGCCTGGCATGGAAATGTCGCTACTGGGCGATCTGGTTATCTGCCGTCAGGTGGTTGAGAAGGAAGCTCAGGAGCAAGGCAAACCACTGGAGGCGCACTGGGCGCATATGGTGGTGCACGGCAGTCTGCATTTGTTAGGTTACGATCACATCGAAGATGACGAAGCAGAAGAAATGGAAGCCCTCGAAACAGAGATTATGCTTGCTCTGGGCTATGAGGATCCGTACATTGCCGAGAAAGAATAA", - "dna_sequence_length": 468, - "functions": [ - "ssRNA-specific endoribonuclease", - "16S rRNA 3' end maturation and quality control co-endoribonuclease working with RNase R", - "rRNA transcription antitermination factor" - ], - "id": "CDS_656", - "location": [ - [ - "NC_000913", - 692341, - "-", - 468 - ] - ], - "md5": "b8a24e753d359845b6d4ea2d6580bab6", - "parent_gene": "", - "protein_md5": "83b737ffb679080aa9c0d56ed58ff728", - "protein_translation": "MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIRVVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE", - "protein_translation_length": 155, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002257" - ], - [ - "gene_synonym", - "JW0657" - ], - [ - "gene_synonym", - "GI:145698230" - ], - [ - "gene_synonym", - "ybeZ" - ], - [ - "gene_synonym", - "b0660" - ], - [ - "gene_synonym", - "phoL" - ], - [ - "gene_synonym", - "EcoGene:EG13656" - ], - [ - "gene_synonym", - "GeneID:948044" - ], - [ - "gene_synonym", - "ECK0652" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9K3" - ], - [ - "gene_synonym", - "NP_415193.2" - ] - ], - "dna_sequence": "TTGAACATAGACACTCGCGAAATCACCCTGGAGCCAGCAGACAATGCGCGTCTGTTGAGCCTGTGCGGCCCGTTTGATGACAACATCAAGCAGCTCGAACGCCGTCTCGGCATCGAGATCAATCGCCGCGATAACCACTTTAAACTGACCGGCCGTCCGATTTGCGTCACCGCTGCGGCAGACATTCTGCGTAGCCTGTATGTCGATACTGCCCCGATGCGCGGTCAGATTCAGGATATCGAACCGGAACAGATCCACCTTGCGATTAAAGAAGCGCGGGTACTGGAGCAAAGCGCGGAGAGCGTGCCGGAGTACGGCAAAGCGGTCAATATCAAAACCAAACGCGGCGTAATTAAGCCGCGCACGCCAAACCAGGCGCAGTACATCGCCAATATTCTCGACCATGACATTACCTTCGGCGTTGGCCCGGCGGGTACGGGTAAAACCTACCTGGCAGTGGCTGCGGCAGTTGATGCCCTGGAGCGTCAGGAAATTCGCCGTATTCTGCTGACTCGTCCGGCAGTAGAAGCCGGTGAGAAACTGGGCTTCCTGCCTGGCGATTTAAGCCAGAAAGTAGACCCGTATCTGCGCCCGCTGTACGACGCGCTGTTTGAAATGCTGGGCTTTGAGAAAGTCGAGAAACTGATTGAGCGCAACGTTATTGAAGTCGCACCGCTGGCCTATATGCGTGGTCGTACGCTGAACGACGCGTTTATCATTCTCGATGAGAGCCAGAACACCACCATCGAACAGATGAAGATGTTCCTGACCCGTATCGGTTTTAACTCAAAAGCGGTTATCACCGGCGACGTCACACAGATCGACCTGCCGCGTAATACTAAATCAGGCTTACGTCACGCCATCGAAGTGCTGGCCGATGTCGAAGAGATCAGCTTTAACTTCTTCCACAGCGAAGACGTGGTTCGTCACCCTGTGGTGGCGCGTATCGTTAACGCCTATGAAGCCTGGGAAGAAGCCGAACAAAAACGAAAAGCGGCGCTGGCAGCAGAACGCAAGCGCGAAGAACAGGAACAAAAATGA", 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"gene_synonym", - "GI:16128644" - ], - [ - "gene_synonym", - "yleA" - ], - [ - "gene_synonym", - "ECK0653" - ], - [ - "gene_synonym", - "GeneID:945260" - ], - [ - "gene_synonym", - "EcoGene:EG13657" - ], - [ - "gene_synonym", - "ASAP:ABE-0002260" - ] - ], - "dna_sequence": "ATGACCAAAAAACTCCATATTAAAACCTGGGGCTGTCAGATGAACGAGTACGATTCATCGAAGATGGCCGATCTGCTGGATGCCACCCACGGCTATCAACTGACCGACGTGGCGGAAGAAGCGGATGTGCTGCTGCTGAACACCTGCTCAATCCGCGAGAAGGCTCAGGAAAAAGTCTTCCATCAGTTGGGTCGCTGGAAACTGTTAAAAGAGAAGAATCCAGACCTGATTATCGGCGTCGGTGGCTGCGTGGCATCGCAAGAAGGCGAGCACATTCGCCAGCGCGCCCACTATGTCGATATTATTTTTGGGCCGCAAACGCTGCACCGTCTGCCGGAGATGATCAACTCCGTGCGTGGCGACCGCAGCCCGGTTGTAGATATCAGCTTCCCGGAAATCGAGAAGTTTGACCGTCTACCGGAACCGCGCGCCGAAGGGCCGACCGCGTTTGTCTCCATCATGGAAGGCTGCAATAAATATTGCACCTACTGCGTGGTGCCTTACACCCGTGGTGAAGAGGTAAGCCGTCCGTCCGACGATATTCTGTTTGAGATTGCCCAGCTTGCGGCTCAGGGCGTGCGTGAAGTCAACCTGCTCGGTCAGAACGTGAACGCCTGGCGTGGTGAAAACTACGACGGCACCACCGGATCGTTTGCCGATCTGCTGCGTCTGGTTGCTGCGATCGACGGGATCGATCGTATTCGCTTTACCACCAGCCATCCGATCGAATTCACCGACGATATCATCGAAGTGTATCGCGACACGCCGGAGCTGGTGAGCTTCCTGCATCTGCCGGTACAGAGCGGTTCCGATCGCATTCTGAACCTGATGGGCCGTACCCATACGGCGCTGGAGTACAAAGCGATCATCCGTAAACTGCGTGCGGCGCGTCCAGATATTCAGATCAGTTCTGATTTCATCGTTGGCTTCCCTGGCGAAACCACCGAAGACTTCGAGAAAACGATGAAGCTGATTGCCGACGTCAATTTCGACATGAGCTACAGCTTTATCTTCTCTGCACGTCCGGGTACACCAGCCGCCGATATGGTTGATGATGTTCCGGAAGAAGAGAAGAAGCAGCGTCTGTATATTCTGCAAGAGCGCATTAATCAGCAAGCGATGGCGTGGAGCCGCCGGATGCTCGGCACCACCCAGCGTATTCTGGTAGAAGGTACATCGCGTAAGAGCATCATGGAGCTTTCCGGGCGTACGGAAAATAACCGCGTGGTCAACTTCGAAGGCACGCCGGATATGATCGGTAAATTCGTCGATGTAGAAATTACCGACGTCTACCCGAACTCTCTGCGCGGTAAAGTGGTGCGTACTGAAGATGAAATGGGTCTGCGCGTGGCAGAAACACCGGAATCAGTGATTGCCCGTACCCGCAAAGAAAACGACCTTGGCGTGGGTTATTATCAGCCGTAA", 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], - [ - "gene_synonym", - "JW0659" - ], - [ - "gene_synonym", - "ECK0654" - ], - [ - "gene_synonym", - "GI:16128645" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75728" - ], - [ - "gene_synonym", - "yleB" - ], - [ - "gene_synonym", - "ubiF" - ], - [ - "gene_synonym", - "ASAP:ABE-0002265" - ], - [ - "gene_synonym", - "EcoGene:EG13658" - ] - ], - "dna_sequence": "ATGACAAATCAACCAACGGAAATTGCCATTGTCGGCGGAGGAATGGTCGGCGGCGCACTGGCGCTGGGGCTGGCACAGCACGGATTTGCGGTAACGGTGATCGAGCACGCAGAACCAGCGCCGTTTGTCGCTGATAGCCAACCGGACGTGCGGATCTCGGCGATCAGCGCGGCTTCGGTATCATTGCTTAAAGGGTTAGGGGTCTGGGATGCAGTACAGGCTATGCGTTGCCATCCTTACCGCAGACTGGAAACGTGGGAGTGGGAAACGGCGCATGTGGTGTTTGACGCCGCTGAACTTAAGCTACCGCTGCTTGGCTATATGGTGGAAAACACTGTCCTGCAACAGGCGTTGTGGCAGGCGCTGGAAGCGCATCCGAAAGTAACGTTACGTGTGCCAGGCTCGCTGATTGCGCTGCATCGCCATGATGATCTTCAGGAGCTGGAGCTGAAAGGCGGTGAAGTGATTCGCGCGAAGCTGGTGATTGGTGCCGACGGCGCAAATTCGCAGGTGCGGCAGATGGCGGGAATTGGCGTTCATGCATGGCAGTATGCGCAGTCGTGCATGTTGATTAGCGTCCAGTGCGAGAACGATCCCGGCGACAGCACCTGGCAGCAATTTACTCCGGACGGACCGCGTGCGTTTCTGCCGTTGTTTGATAACTGGGCATCGCTGGTGTGGTATGACTCTCCGGCGCGTATTCGCCAGTTGCAGAATATGAATATGGCACAGCTCCAGGCGGAAATCGCGAAGCATTTCCCGTCGCGTCTGGGTTACGTTACACCGCTTGCCGCTGGTGCGTTTCCGCTGACGCGTCGCCATGCGTTGCAGTACGTGCAGCCAGGGCTTGCGCTGGTGGGCGATGCCGCGCATACCATCCATCCGCTGGCGGGGCAGGGAGTGAATCTTGGTTATCGTGATGTCGATGCCCTGATTGATGTTCTGGTCAACGCCCGCAGCTACGGCGAAGCGTGGGCCAGTTATCCTGTCCTCAAGCGTTACCAGATGCGGCGCATGGCGGATAACTTCATTATGCAAAGCGGTATGGATCTGTTTTATGCCGGATTCAGCAATAATCTGCCACCACTGCGTTTTATGCGTAATCTCGGGTTAATGGCGGCGGAGCGTGCTGGCGTGTTGAAACGTCAGGCGCTGAAATATGCGTTAGGGTTGTAG", 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"UniProtKB/Swiss-Prot:P22106" - ], - [ - "gene_synonym", - "JW0660" - ], - [ - "gene_synonym", - "b0674" - ], - [ - "gene_synonym", - "EcoGene:EG10092" - ], - [ - "gene_synonym", - "GI:16128650" - ], - [ - "gene_synonym", - "asnB" - ], - [ - "gene_synonym", - "NP_415200.1" - ] - ], - "dna_sequence": "ATGTGTTCAATTTTTGGCGTATTCGATATCAAAACAGACGCAGTTGAGCTGCGTAAGAAAGCCCTCGAGCTGTCACGCCTGATGCGTCATCGTGGCCCGGACTGGTCCGGTATTTATGCCAGCGATAACGCCATTCTCGCCCACGAACGTCTGTCAATTGTTGACGTTAACGCGGGGGCGCAACCTCTCTACAACCAACAAAAAACCCACGTACTGGCGGTAAACGGTGAAATCTACAACCACCAGGCATTGCGCGCCGAATATGGCGATCGTTACCAGTTCCAGACCGGGTCTGACTGTGAAGTGATCCTCGCGCTGTATCAGGAAAAAGGGCCGGAATTTCTCGACGACTTGCAGGGCATGTTTGCCTTTGCACTGTACGACAGCGAAAAAGATGCCTACCTGATTGGTCGCGACCATCTGGGGATCATCCCACTGTATATGGGGTATGACGAACACGGTCAGCTGTATGTGGCCTCAGAAATGAAAGCGCTGGTGCCAGTTTGCCGCACGATTAAAGAGTTCCCGGCGGGGAGCTATTTGTGGAGCCAGGACGGCGAAATCCGTTCTTACTATCATCGCGACTGGTTCGACTACGATGCGGTGAAAGATAACGTGACCGACAAAAACGAGCTGCGTCAGGCACTGGAAGATTCAGTTAAAAGCCATCTGATGTCTGATGTGCCTTACGGTGTGCTGCTTTCTGGTGGTCTGGATTCCTCAATTATTTCCGCTATCACCAAGAAATACGCAGCCCGTCGCGTGGAAGATCAGGAACGCTCTGAAGCCTGGTGGCCGCAGTTACACTCCTTTGCTGTAGGTCTGCCGGGTTCACCGGATCTGAAAGCAGCCCAGGAAGTGGCAAACCATCTGGGCACGGTGCATCACGAAATTCACTTCACTGTACAGGAAGGTCTGGATGCCATCCGCGACGTGATTTACCACATCGAAACTTATGATGTGACCACTATTCGCGCTTCAACACCGATGTATTTAATGTCGCGTAAGATCAAGGCGATGGGCATTAAAATGGTGCTGTCCGGTGAAGGTTCTGATGAAGTGTTCGGCGGTTATCTTTACTTCCACAAAGCACCGAATGCCAAAGAACTGCATGAAGAGACGGTGCGTAAACTGCTGGCCCTGCATATGTATGACTGCGCGCGTGCCAACAAAGCGATGTCAGCCTGGGGCGTGGAAGCACGCGTTCCGTTCCTCGACAAAAAATTCCTTGATGTGGCGATGCGTATTAACCCACAGGATAAAATGTGCGGTAACGGCAAAATGGAAAAACACATCCTGCGTGAATGTTTTGAAGCGTATCTGCCTGCAAGCGTGGCCTGGCGGCAGAAAGAGCAGTTCTCCGATGGCGTCGGTTACAGTTGGATCGACACCCTGAAAGAAGTGGCTGCGCAGCAGGTTTCTGATCAGCAACTGGAAACTGCCCGCTTCCGCTTCCCGTACAACACGCCAACCTCTAAAGAAGCGTACTTGTATCGGGAGATCTTTGAAGAACTATTCCCGCTTCCGAGCGCCGCTGAGTGCGTGCCGGGCGGTCCTTCCGTCGCTTGTTCTTCCGCTAAAGCGATCGAATGGGATGAAGCGTTCAAGAAAATGGACGATCCGTCTGGTCGCGCGGTTGGTGTTCACCAGTCGGCGTATAAGTAA", 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"gene_synonym", - "ASAP:ABE-0002296" - ], - [ - "gene_synonym", - "ECK0663" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF24" - ], - [ - "gene_synonym", - "JW0661" - ], - [ - "gene_synonym", - "NP_415201.1" - ], - [ - "gene_synonym", - "b0675" - ], - [ - "gene_synonym", - "nagD" - ], - [ - "gene_synonym", - "EcoGene:EG10634" - ], - [ - "gene_synonym", - "GI:16128651" - ], - [ - "gene_synonym", - "umpH" - ] - ], - "dna_sequence": "ATGACCATTAAAAATGTAATTTGCGATATCGACGGCGTGCTGATGCACGATAACGTCGCCGTACCGGGTGCAGCGGAATTTTTGCACGGGATTATGGATAAAGGCCTGCCGCTGGTGTTGCTGACCAACTATCCTTCGCAGACTGGGCAAGATCTGGCGAACCGCTTTGCCACCGCAGGTGTCGATGTACCTGACAGCGTGTTTTATACCTCTGCGATGGCGACTGCCGATTTCCTGCGTCGCCAGGAAGGCAAGAAAGCGTATGTGGTGGGCGAAGGCGCACTGATTCATGAACTGTACAAAGCCGGTTTCACTATTACCGATGTGAACCCTGATTTCGTGATTGTTGGCGAAACGCGTTCCTACAACTGGGACATGATGCATAAAGCAGCCTATTTCGTCGCTAACGGTGCACGTTTTATCGCCACCAATCCGGACACCCACGGGCGCGGTTTTTATCCCGCTTGTGGCGCGTTGTGTGCAGGGATTGAGAAAATCTCCGGGCGCAAACCGTTCTATGTTGGTAAGCCCAGCCCGTGGATCATCCGCGCAGCATTAAACAAAATGCAGGCGCATTCGGAAGAAACGGTGATTGTCGGCGATAACCTGCGTACCGATATTCTGGCCGGCTTCCAGGCAGGTCTGGAGACGATTCTGGTGCTTTCTGGTGTTTCGTCGCTCGACGATATCGACAGTATGCCTTTCCGCCCCAGCTGGATTTACCCGTCAGTCGCTGAAATCGACGTTATCTGA", - "dna_sequence_length": 753, - "functions": [ - "UMP phosphatase" - ], - "id": "CDS_661", - "location": [ - [ - "NC_000913", - 700326, - "-", - 753 - ] - ], - "md5": "8fda9cbb38fb515ade2822b2cb695cad", - "parent_gene": "", - "protein_md5": "1a4dc8343b5f29efbb9a0fd6d8ec0df8", - "protein_translation": "MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEIDVI", - "protein_translation_length": 250, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "nagR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF20" - ], - [ - "gene_synonym", - "ASAP:ABE-0002299" - ], - [ - "gene_synonym", - "ECK0664" - ], - [ - "gene_synonym", - "JW0662" - ], - [ - "gene_synonym", - "NP_415202.1" - ], - [ - "gene_synonym", - "EcoGene:EG10636" - ], - [ - "gene_synonym", - "b0676" - ], - [ - "gene_synonym", - "nagC" - ], - [ - "gene_synonym", - "GI:16128652" - ], - [ - "gene_synonym", - "GeneID:945285" - ] - ], - "dna_sequence": "ATGACACCAGGCGGACAAGCTCAGATAGGTAATGTTGATCTCGTAAAACAGCTTAACAGCGCGGCGGTTTATCGCCTGATTGACCAGTACGGGCCAATCTCGCGGATTCAGATTGCCGAGCAAAGCCAGCTTGCCCCCGCCAGCGTAACCAAAATTACGCGTCAGCTTATCGAACGCGGGCTGATCAAAGAAGTTGATCAGCAGGCCTCCACCGGGGGCCGCCGCGCTATCTCCATCGTCACCGAAACCCGCAATTTCCACGCAATCGGCGTACGGCTTGGTCGTCATGACGCCACCATCACTCTGTTTGATCTCAGCAGCAAAGTGCTGGCAGAAGAACATTACCCGCTGCCGGAACGTACCCAGCAAACGCTGGAACATGCCCTGTTGAATGCCATTGCTCAGTTTATTGATAGCTACCAGCGCAAACTGCGCGAGCTGATCGCGATTTCGGTGATCCTGCCAGGGCTTGTTGACCCGGACAGCGGCAAAATTCATTACATGCCGCATATTCAGGTAGAAAACTGGGGGCTGGTAGAAGCTCTGGAAGAACGTTTTAAAGTGACCTGTTTCGTTGGTCACGATATCCGTAGTCTGGCGCTGGCGGAGCACTACTTCGGTGCAAGTCAGGATTGCGAAGACTCCATTCTGGTGCGTGTCCATCGCGGAACCGGGGCCGGGATTATCTCTAACGGGCGCATTTTTATTGGCCGCAACGGCAACGTCGGTGAAATTGGCCATATTCAGGTCGAACCGCTGGGTGAACGCTGCCACTGCGGCAACTTTGGCTGCCTGGAAACTATCGCTGCCAACGCTGCCATTGAACAACGGGTGTTGAATCTGTTAAAGCAGGGCTACCAGAGCCGCGTGCCGCTGGACGACTGCACCATCAAAACTATCTGCAAAGCCGCGAACAAAGGCGATAGTCTGGCGTCGGAAGTAATTGAGTATGTCGGTCGTCATCTGGGTAAAACCATCGCCATTGCTATCAACTTATTTAATCCGCAAAAAATTGTTATTGCCGGTGAAATCACCGAAGCCGATAAAGTGCTGCTCCCTGCTATTGAAAGCTGCATTAATACCCAGGCGCTGAAGGCGTTTCGCACTAATCTGCCGGTGGTACGTTCTGAGCTGGATCACCGCTCGGCAATCGGCGCTTTTGCGCTGGTAAAACGCGCCATGCTCAACGGTATTTTGCTCCAGCATTTGCTGGAAAATTAA", - "dna_sequence_length": 1221, - "functions": [ - "N-acetylglucosamine-inducible nag divergent operon transcriptional repressor" - ], - "id": "CDS_662", - "location": [ - [ - "NC_000913", - 701594, - "-", - 1221 - ] - ], - "md5": "6e22460256e0d9f24a83236d91817a67", - "parent_gene": "", - "protein_md5": "958ba29334f789f470d07397b634d739", - "protein_translation": "MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQLAPASVTKITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITLFDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDPDSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILVRVHRGTGAGIISNGRIFIGRNGNVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQRVLNLLKQGYQSRVPLDDCTIKTICKAANKGDSLASEVIEYVGRHLGKTIAIAINLFNPQKIVIAGEITEADKVLLPAIESCINTQALKAFRTNLPVVRSELDHRSAIGAFALVKRAMLNGILLQHLLEN", - "protein_translation_length": 406, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002301" - ], - [ - "gene_synonym", - "NP_415203.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF18" - ], - [ - "gene_synonym", - "nagA" - ], - [ - "gene_synonym", - "JW0663" - ], - [ - "gene_synonym", - "ECK0665" - ], - [ - "gene_synonym", - "b0677" - ], - [ - "gene_synonym", - "GeneID:945289" - ], - [ - "gene_synonym", - "EcoGene:EG10632" - ], - [ - "gene_synonym", - "GI:16128653" - ] - ], - "dna_sequence": "ATGTATGCATTAACCCAGGGCCGGATCTTTACCGGCCACGAATTTCTTGATGACCACGCGGTTGTTATCGCTGATGGCCTGATTAAAAGCGTCTGTCCGGTAGCGGAACTGCCGCCAGAGATCGAACAACGTTCACTGAACGGGGCCATTCTCTCCCCCGGTTTTATCGATGTGCAGTTAAACGGCTGCGGCGGCGTACAGTTTAACGACACCGCTGAAGCGGTCAGCGTGGAAACGCTGGAAATCATGCAGAAAGCCAATGAGAAATCAGGCTGTACTAACTATCTGCCGACGCTTATCACCACCAGCGATGAGCTGATGAAACAGGGCGTGCGCGTTATGCGCGAGTACCTGGCAAAACATCCGAATCAGGCGTTAGGTCTGCATCTGGAAGGTCCGTGGCTGAATCTGGTAAAAAAAGGCACCCATAATCCGAATTTTGTGCGTAAGCCTGATGCCGCGCTGGTCGATTTCCTGTGTGAAAACGCCGACGTCATTACCAAAGTGACCCTGGCACCGGAAATGGTTCCTGCGGAAGTCATCAGCAAACTGGCAAATGCCGGGATTGTGGTTTCTGCCGGTCACTCCAACGCGACGTTGAAAGAAGCAAAAGCCGGTTTCCGCGCGGGGATTACCTTTGCCACCCATCTGTACAACGCGATGCCGTATATTACCGGTCGTGAACCTGGCCTGGCGGGCGCGATCCTCGACGAAGCTGACATTTATTGCGGTATTATTGCTGATGGCCTGCATGTTGATTACGCCAACATTCGCAACGCTAAACGTCTGAAAGGCGACAAACTGTGTCTGGTTACTGACGCCACCGCGCCAGCAGGTGCCAACATTGAACAGTTCATTTTTGCGGGTAAAACAATATACTACCGTAACGGACTTTGTGTGGATGAGAACGGTACGTTAAGCGGTTCATCCTTAACCATGATTGAAGGCGTGCGTAATCTGGTCGAACATTGCGGTATCGCACTGGATGAAGTGCTACGTATGGCGACGCTCTATCCGGCGCGTGCGATTGGCGTTGAGAAACGTCTCGGCACACTCGCCGCAGGTAAAGTAGCCAACCTGACTGCATTCACACCTGATTTTAAAATCACCAAGACCATCGTTAACGGTAACGAGGTCGTAACTCAATAA", 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- "GI:16128654" - ], - [ - "gene_synonym", - "glmD" - ], - [ - "gene_synonym", - "nagB" - ], - [ - "gene_synonym", - "EcoGene:EG10633" - ], - [ - "gene_synonym", - "NP_415204.1" - ], - [ - "gene_synonym", - "b0678" - ], - [ - "gene_synonym", - "GeneID:945290" - ] - ], - "dna_sequence": "ATGAGACTGATCCCCCTGACTACCGCTGAACAGGTCGGCAAATGGGCTGCTCGCCATATCGTCAATCGTATCAATGCGTTCAAACCGACTGCCGATCGTCCGTTTGTACTGGGCCTGCCGACTGGCGGCACGCCGATGACCACCTATAAAGCGTTAGTCGAAATGCATAAAGCAGGCCAGGTCAGCTTTAAGCACGTTGTCACCTTCAACATGGACGAATATGTCGGTCTGCCGAAAGAGCATCCGGAAAGCTACTACAGCTTTATGCACCGTAATTTCTTCGATCACGTTGATATTCCAGCAGAAAACATCAACCTTCTCAACGGCAACGCCCCGGATATCGACGCCGAGTGCCGCCAGTATGAAGAAAAAATCCGTTCTTACGGAAAAATTCATCTGTTTATGGGCGGTGTAGGTAACGACGGTCATATTGCATTTAACGAACCGGCGTCTTCTCTGGCTTCTCGTACTCGTATCAAAACCCTGACTCATGACACTCGCGTCGCAAACTCTCGTTTCTTTGATAACGATGTTAATCAGGTGCCAAAATATGCCCTGACTGTCGGTGTTGGTACACTGCTGGATGCCGAAGAAGTGATGATTCTGGTGCTGGGTAGCCAGAAAGCACTGGCGCTGCAGGCCGCCGTTGAAGGTTGCGTGAACCATATGTGGACCATCAGCTGTCTGCAACTGCATCCGAAAGCGATCATGGTGTGCGATGAACCTTCCACCATGGAGCTGAAAGTTAAGACTTTAAGATATTTCAATGAATTAGAAGCAGAAAATATCAAAGGTCTGTAA", - "dna_sequence_length": 801, - "functions": [ - "glucosamine-6-phosphate deaminase" - ], - "id": "CDS_664", - "location": [ - [ - "NC_000913", - 703611, - "-", - 801 - ] - ], - "md5": "cb959310b384b0e6a762cd0a34da9db0", - "parent_gene": "", - "protein_md5": "884a1f2ffa4258b2a97a4732ced1b997", - "protein_translation": "MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNELEAENIKGL", - "protein_translation_length": 266, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002312" - ], - [ - "gene_synonym", - "JW0665" - ], - [ - "gene_synonym", - "b0679" - ], - [ - "gene_synonym", - "GI:16128655" - ], - [ - "gene_synonym", - "EcoGene:EG10635" - ], - [ - "gene_synonym", - "nagE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09323" - ], - [ - "gene_synonym", - "GeneID:945292" - ], - [ - "gene_synonym", - "ptsN" - ], - [ - "gene_synonym", - "ECK0667" - ], - [ - "gene_synonym", - "NP_415205.1" - ], - [ - "gene_synonym", - "pstN" - ] - ], - "dna_sequence": "ATGAATATTTTAGGTTTTTTCCAGCGACTCGGTAGGGCGTTACAGCTCCCTATCGCGGTGCTGCCGGTGGCGGCACTGTTGCTGCGATTCGGTCAGCCAGATTTACTTAACGTTGCGTTTATTGCCCAGGCGGGCGGTGCGATTTTTGATAACCTCGCATTAATCTTCGCCATCGGTGTGGCATCCAGCTGGTCGAAAGACAGCGCTGGTGCGGCGGCGCTGGCGGGTGCGGTAGGTTACTTTGTGTTAACCAAAGCGATGGTGACCATCAACCCAGAAATTAACATGGGTGTACTGGCGGGTATCATTACCGGTCTGGTTGGTGGCGCAGCCTATAACCGTTGGTCCGATATTAAACTGCCGGACTTCCTGAGCTTCTTCGGCGGCAAACGCTTTGTGCCGATTGCCACCGGATTCTTCTGCCTGGTGCTGGCGGCCATTTTTGGTTACGTCTGGCCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGGTATCTTTGGTTTCATCAACCGTCTGCTGATCCCAACCGGTCTGCATCAGGTACTGAACACCATCGCCTGGTTCCAGATTGGTGAATTCACCAACGCGGCGGGTACGGTTTTCCACGGTGACATTAACCGCTTCTATGCCGGTGACGGCACCGCGGGGATGTTCATGTCCGGCTTCTTCCCGATCATGATGTTCGGTCTGCCGGGTGCGGCGCTGGCGATGTACTTCGCAGCACCGAAAGAGCGTCGTCCGATGGTTGGCGGTATGCTGCTTTCTGTTGCTGTTACTGCGTTCCTGACCGGTGTGACTGAGCCGCTGGAATTCCTGTTCATGTTCCTTGCTCCGCTGCTGTACCTCCTGCACGCACTGCTGACCGGTATCAGCCTGTTTGTGGCAACGCTGCTGGGTATCCACGCGGGCTTCTCTTTCTCTGCGGGGGCTATCGACTACGCGTTGATGTATAACCTGCCGGCCGCCAGCCAGAACGTCTGGATGCTGCTGGTGATGGGCGTTATCTTCTTCGCTATCTACTTCGTGGTGTTCAGTTTGGTTATCCGCATGTTCAACCTGAAAACGCCGGGTCGTGAAGATAAAGAAGACGAGATCGTTACTGAAGAAGCCAACAGCAACACTGAAGAAGGTCTGACTCAACTGGCAACCAACTATATTGCTGCGGTTGGCGGCACTGACAACCTGAAAGCGATTGACGCCTGTATCACCCGTCTGCGCCTTACAGTGGCTGACTCTGCCCGCGTTAACGATACGATGTGTAAACGTCTGGGTGCTTCTGGGGTAGTGAAACTGAACAAACAGACTATTCAGGTGATTGTTGGCGCGAAAGCAGAATCCATCGGCGATGCGATGAAGAAAGTCGTTGCCCGTGGTCCGGTAGCCGCTGCGTCAGCTGAAGCAACTCCGGCAACTGCCGCGCCTGTAGCAAAACCGCAGGCTGTACCAAACGCGGTATCTATCGCGGAGCTGGTATCGCCGATTACCGGTGATGTCGTGGCACTGGATCAGGTTCCTGACGAAGCATTCGCCAGCAAAGCGGTGGGTGACGGTGTGGCGGTGAAACCGACAGATAAAATCGTCGTATCACCAGCCGCAGGGACAATCGTGAAAATCTTCAACACCAACCACGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAA", 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"MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQAGGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGIITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIHAGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINRFYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGVTEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAASQNVWMLLVMGVIFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLTQLATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDTMCKRLGASGVVKLNKQTIQVIVGAKAESIGDAMKKVVARGPVAAASAEATPATAAPVAKPQAVPNAVSIAELVSPITGDVVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEIVVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDDFSGLIIKAQGHIVAGQTPLYEIKK", - "protein_translation_length": 648, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0668" - ], - [ - "gene_synonym", - "GeneID:945310" - ], - [ - "gene_synonym", - "EcoGene:EG10390" - ], - [ - "gene_synonym", - "JW0666" - ], - [ - "gene_synonym", - "NP_415206.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00962" - ], - [ - "gene_synonym", - "GI:16128656" - ], - [ - "gene_synonym", - "ASAP:ABE-0002317" - ], - [ - "gene_synonym", - "glnS" - ], - [ - "gene_synonym", - "b0680" - ] - ], - "dna_sequence": "ATGAGTGAGGCAGAAGCCCGCCCGACTAACTTTATCCGTCAGATCATCGATGAAGATCTGGCCAGTGGTAAGCACACCACAGTACACACCCGTTTCCCGCCGGAGCCGAATGGCTATCTGCATATTGGCCATGCGAAATCTATCTGCCTGAACTTCGGGATCGCCCAGGACTATAAAGGCCAGTGCAACCTGCGTTTCGACGACACTAACCCGGTAAAAGAAGATATCGAGTATGTTGAGTCGATCAAAAACGACGTAGAGTGGTTAGGTTTTCACTGGTCTGGTAACGTCCGTTACTCCTCCGATTATTTTGATCAGCTCCACGCCTATGCGATCGAACTGATCAATAAAGGCCTGGCGTACGTTGATGAACTGACGCCGGAACAGATCCGCGAATACCGCGGCACCCTGACGCAACCGGGTAAAAACAGCCCGTACCGCGACCGCAGCGTTGAAGAGAACCTGGCGCTGTTCGAAAAAATGCGTGCCGGTGGTTTTGAAGAAGGTAAAGCCTGCCTGCGTGCGAAAATCGACATGGCTTCACCGTTTATCGTGATGCGCGATCCGGTGCTGTACCGTATTAAATTTGCTGAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAACCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTGACCGACAAGCACGTTGAAGGCTGGGATGACCCGCGTATGCCGACCATTTCCGGTCTGCGTCGTCGTGGTTACACTGCGGCTTCTATTCGTGAGTTCTGCAAACGCATCGGCGTGACCAAGCAGGACAACACCATTGAGATGGCGTCGCTGGAATCCTGCATCCGTGAAGATCTCAACGAAAATGCGCCGCGCGCAATGGCGGTTATCGATCCGGTGAAACTGGTTATCGAAAACTATCAGGGCGAAGGCGAAATGGTTACCATGCCGAACCATCCGAACAAACCGGAAATGGGCAGCCGTCAGGTGCCGTTTAGCGGTGAGATTTGGATTGATCGCGCCGATTTCCGCGAAGAAGCTAACAAGCAGTACAAACGTCTGGTGCTGGGTAAAGAAGTGCGTCTGCGTAATGCTTATGTGATTAAGGCAGAACGCGTCGAGAAAGATGCCGAAGGTAATATCACCACCATCTTCTGTACTTATGACGCCGATACCTTAAGCAAAGATCCGGCAGATGGTCGTAAAGTCAAAGGTGTTATTCACTGGGTGAGCGCGGCACATGCGCTGCCGGTTGAAATCCGTTTGTATGACCGTCTGTTCAGCGTGCCTAACCCAGGTGCTGCGGATGATTTCCTGTCGGTGATTAACCCGGAATCGCTGGTGATCAAACAGGGCTTTGCTGAACCGTCGCTGAAAGATGCGGTTGCGGGTAAAGCATTCCAGTTTGAGCGTGAAGGTTACTTCTGCCTCGATAGCCGCCATTCTACGGCGGAAAAACCGGTATTTAACCGCACCGTTGGGCTGCGTGATACCTGGGCGAAAGTAGGCGAGTAA", 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"gene_synonym", - "GeneID:945296" - ], - [ - "gene_synonym", - "JW0667" - ], - [ - "gene_synonym", - "chiP" - ], - [ - "gene_synonym", - "NP_415207.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002323" - ], - [ - "gene_synonym", - "GI:16128657" - ], - [ - "gene_synonym", - "b0681" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75733" - ], - [ - "gene_synonym", - "EcoGene:EG13659" - ], - [ - "gene_synonym", - "ybfM" - ] - ], - "dna_sequence": "ATGCGTACGTTTAGTGGCAAACGTAGTACGCTGGCGCTGGCTATCGCCGGTGTTACAGCAATGTCGGGCTTTATGGCAATGCCGGAGGCTCGCGCCGAAGGATTCATCGACGATTCAACCTTAACCGGCGGTATCTATTACTGGCAGCGTGAACGCGACCGTAAAGATGTTACCGACGGCGACAAATACAAAACCAACCTTTCTCACTCCACCTGGAATGCCAACCTCGATTTTCAGTCCGGTTATGCTGCTGATATGTTCGGCCTTGATATTGCTGCGTTTACGGCGATTGAAATGGCGGAAAACGGCGACAGCTCCCACCCGAACGAAATCGCGTTTTCAAAAAGTAATAAAGCCTATGACGAAGACTGGTCCGGCGACAAAAGCGGTATAAGCCTGTATAAAGCTGCGGCCAAATTTAAATACGGTCCGGTTTGGGCGAGGGCAGGTTACATTCAGCCAACTGGTCAAACGCTGTTAGCGCCGCACTGGAGCTTTATGCCAGGTACTTATCAGGGGGCGGAAGCCGGGGCGAATTTTGATTACGGCGATGCTGGTGCGTTGAGTTTCTCCTACATGTGGACCAACGAATACAAAGCGCCGTGGCATCTGGAAATGGATGAGTTTTATCAGAACGATAAAACCACCAAAGTTGATTATCTGCACTCCTTTGGGGCGAAATACGACTTCAAAAATAACTTCGTACTGGAAGCGGCATTTGGTCAGGCGGAAGGGTATATCGATCAATATTTTGCCAAAGCCAGCTACAAATTTGATATCGCCGGTAGCCCGTTAACCACCAGCTACCAGTTCTACGGTACCCGAGATAAAGTTGACGATCGCAGCGTCAACGACCTTTATGACGGCACCGCCTGGCTGCAAGCGTTGACCTTTGGTTACCGGGCGGCTGACGTAGTGGATTTGCGCCTCGAAGGCACCTGGGTTAAGGCTGACGGTCAGCAGGGATACTTCCTGCAACGTATGACTCCAACCTACGCTTCCTCAAACGGTCGCCTGGATATCTGGTGGGATAACCGTTCTGACTTCAACGCCAACGGCGAAAAAGCGGTCTTCTTCGGTGCGATGTATGACCTGAAAAACTGGAATCTTCCAGGCTTCGCCATCGGCGCTTCCTACGTTTACGCATGGGATGCTAAACCTGCGACCTGGCAGAGCAATCCGGATGCGTACTACGACAAAAACCGGACTATTGAAGAGTCTGCCTACAGCCTGGATGCGGTCTATACCATTCAGGACGGTCGCGCCAAAGGCACGATGTTCAAACTGCATTTCACCGAATACGACAACCACTCCGACATCCCAAGCTGGGGCGGTGGTTACGGCAACATCTTCCAGGATGAGCGTGACGTGAAATTTATGGTAATCGCACCATTCACCATCTTCTGA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P75734" - ], - [ - "gene_synonym", - "GeneID:945713" - ], - [ - "gene_synonym", - "chiQ" - ], - [ - "gene_synonym", - "EcoGene:EG13660" - ], - [ - "gene_synonym", - "b0682" - ], - [ - "gene_synonym", - "GI:16128658" - ], - [ - "gene_synonym", - "ybfN" - ], - [ - "gene_synonym", - "ASAP:ABE-0002325" - ] - ], - "dna_sequence": "ATGAAAAAACTGATTCTCATCGCCATAATGGCATCGGGGCTGGTAGCTTGTGCGCAATCAACCGCGCCACAGGAAGACAGTCGTCTGAAAGAGGCATACAGCGCCTGTATCAACACCGCACAAGGTTCGCCAGAAAAAATTGAAGCCTGCCAGAGCGTGTTAAACGTGCTGAAGAAAGAGAAACAACATCAGCAGTTTGCCGACCAGGAAAGTGTACGCGTACTGGATTATCAGCAGTGTCTGCGTGCAACGCAAACCGGAAATGATCAGGCGGTGAAAGCCGATTGTGATAAAGTCTGGCAGGAAATACGCAGTAATAACAAATAA", - "dna_sequence_length": 327, - "functions": [ - "chitosugar-induced verified lipoprotein" - ], - "id": "CDS_668", - "location": [ - [ - "NC_000913", - 709790, - "+", - 327 - ] - ], - "md5": "358c96eac35edfc67daba061793db1f0", - "parent_gene": "", - "protein_md5": "b536ea2d05072cdf50386069dc233958", - "protein_translation": "MKKLILIAIMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSPEKIEACQSVLNVLKKEKQHQQFADQESVRVLDYQQCLRATQTGNDQAVKADCDKVWQEIRSNNK", - "protein_translation_length": 108, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "fur" - ], - [ - "gene_synonym", - "JW0669" - ], - [ - "gene_synonym", - "ECK0671" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9A9" - ], - [ - "gene_synonym", - "EcoGene:EG10359" - ], - [ - "gene_synonym", - "NP_415209.1" - ], - [ - "gene_synonym", - "b0683" - ], - [ - "gene_synonym", - "GeneID:945295" - ], - [ - "gene_synonym", - "ASAP:ABE-0002327" - ], - [ - "gene_synonym", - "GI:16128659" - ] - ], - "dna_sequence": "ATGACTGATAACAATACCGCCCTAAAGAAAGCTGGCCTGAAAGTAACGCTTCCTCGTTTAAAAATCCTGGAAGTTCTTCAGGAGCCGGACAACCATCACGTCAGTGCGGAAGATTTATACAAACGTCTGATCGATATGGGTGAAGAAATTGGTCTGGCTACGGTATATCGCGTACTGAACCAGTTTGACGACGCTGGTATCGTCACCCGCCACAATTTTGAAGGCGGTAAATCCGTATTTGAACTGACACAGCAACATCACCACGATCACCTGATCTGCCTCGACTGCGGCAAGGTTATCGAATTTAGTGATGATTCCATCGAAGCGCGTCAGCGTGAAATTGCCGCAAAACATGGCATTCGCCTGACTAACCACAGTCTCTATCTTTACGGTCACTGTGCCGAAGGCGATTGCCGCGAAGATGAACATGCGCACGAAGGCAAATAA", - "dna_sequence_length": 447, - "functions": [ - "ferric iron uptake regulon transcriptional repressor", - "autorepressor" - ], - "id": "CDS_669", - "location": [ - [ - "NC_000913", - 710646, - "-", - 447 - ] - ], - "md5": "c4db78456601a69039856acd78af0ca6", - "parent_gene": "", - "protein_md5": "fb5cad1bdf5c957282b288c2e61ba77c", - "protein_translation": "MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEFSDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK", - "protein_translation_length": 148, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14465" - ], - [ - "gene_synonym", - "b4637" - ], - [ - "gene_synonym", - "uof" - ], - [ - "gene_synonym", - "ECK4461" - ], - [ - "gene_synonym", - "GI:157783150" - ], - [ - "gene_synonym", - "YP_001491546.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:A8DYP9" - ], - [ - "gene_synonym", - "GeneID:5625562" - ] - ], - "dna_sequence": "ATGATACGCATTATCTCAAGAGCAAATTCTGTCACTTCTTCTAATGAAGTGAACCGCTTAGTAACAGGACAGATTCCGCATGACTGA", - "dna_sequence_length": 87, - "functions": [ - "ryhB-regulated fur leader peptide" - ], - "id": "CDS_670", - "location": [ - [ - "NC_000913", - 710725, - "-", - 87 - ] - ], - "md5": "8872e3b6d30725e0ee4f00e04b2a9ebb", - "parent_gene": "", - "protein_md5": "f0d5ee7d7924ba548933579cce2c3a11", - "protein_translation": "MIRIISRANSVTSSNEVNRLVTGQIPHD", - "protein_translation_length": 28, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0671" - ], - [ - "gene_synonym", - "NP_415210.1" - ], - [ - "gene_synonym", - "ECK0672" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P61949" - ], - [ - "gene_synonym", - "GeneID:945293" - ], - [ - "gene_synonym", - "GI:16128660" - ], - [ - "gene_synonym", - "EcoGene:EG10318" - ], - [ - "gene_synonym", - "ASAP:ABE-0002332" - ], - [ - "gene_synonym", - "b0684" - ], - [ - "gene_synonym", - "fldA" - ] - ], - "dna_sequence": "ATGGCTATCACTGGCATCTTTTTCGGCAGCGACACCGGTAATACCGAAAATATCGCAAAAATGATTCAAAAACAGCTTGGTAAAGACGTTGCCGATGTCCATGACATTGCAAAAAGCAGCAAAGAAGATCTGGAAGCTTATGACATTCTGCTGCTGGGCATCCCAACCTGGTATTACGGCGAAGCGCAGTGTGACTGGGATGACTTCTTCCCGACTCTCGAAGAGATTGATTTCAACGGCAAACTGGTTGCGCTGTTTGGTTGTGGTGACCAGGAAGATTACGCCGAATATTTCTGCGACGCATTGGGCACCATCCGCGACATCATTGAACCGCGCGGTGCAACCATCGTTGGTCACTGGCCAACTGCGGGCTATCATTTCGAAGCATCAAAAGGTCTGGCAGATGACGACCACTTTGTCGGTCTGGCTATCGACGAAGACCGTCAGCCGGAACTGACCGCTGAACGTGTAGAAAAATGGGTTAAACAGATTTCTGAAGAGTTGCATCTCGACGAAATTCTCAATGCCTGA", - "dna_sequence_length": 531, - "functions": [ - "flavodoxin 1" - ], - "id": "CDS_671", - "location": [ - [ - "NC_000913", - 711465, - "-", - 531 - ] - ], - "md5": "5fa08e817d3c0f0960d3e8a0c8747e47", - "parent_gene": "", - "protein_md5": "0791e3a65ee6629fa7d1b8450305c4f7", - "protein_translation": "MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDLEAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDALGTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKWVKQISEELHLDEILNA", - "protein_translation_length": 176, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415211.2" - ], - [ - "gene_synonym", - "JW5816" - ], - [ - "gene_synonym", - "ECK0673" - ], - [ - "gene_synonym", - "b0685" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAU7" - ], - [ - "gene_synonym", - "EcoGene:EG11775" - ], - [ - "gene_synonym", - "ybfE" - ], - [ - "gene_synonym", - "GI:90111159" - ], - [ - "gene_synonym", - "ASAP:ABE-0002335" - ], - [ - "gene_synonym", - "GeneID:945291" - ] - ], - "dna_sequence": "ATGGCCAAAGAACAAACGGACCGTACGACATTAGATCTGTTCGCGCACGAGCGTCGACCGGGACGACCGAAAACTAATCCGCTTTCGCGCGATGAACAGCTGCGTATTAATAAACGCAACCAGCTAAAACGCGACAAAGTACGTGGCCTTAAGCGTGTCGAACTGAAGCTGAACGCGGAAGCTGTCGAGGCGCTGAACGAGCTGGCGGAGTCGCGCAATATGAGCCGTAGCGAACTGATCGAAGAGATGTTAATGCAGCAACTGGCGGCGCTGCGTAGTCAGGGCATCGTTTAA", - "dna_sequence_length": 294, - "functions": [ - "LexA-regulated protein, CopB family" - ], - "id": "CDS_672", - "location": [ - [ - "NC_000913", - 711898, - "-", - 294 - ] - ], - "md5": "653e8e993d3b093768ce986c3309579c", - "parent_gene": "", - "protein_md5": "0782f6f252c33425908184b0f367952b", - "protein_translation": "MAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV", - "protein_translation_length": 97, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0673" - ], - [ - "gene_synonym", - "GI:16128662" - ], - [ - "gene_synonym", - "EcoGene:EG11776" - ], - [ - "gene_synonym", - "ECK0674" - ], - [ - "gene_synonym", - "GeneID:945288" - ], - [ - "gene_synonym", - "NP_415212.1" - ], - [ - "gene_synonym", - "ybfF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75736" - ], - [ - "gene_synonym", - "ASAP:ABE-0002337" - ], - [ - "gene_synonym", - "b0686" - ] - ], - "dna_sequence": "ATGAAATTGAATATCCGCGCGCAAACTGCACAAAACCAGCACAATAATTCTCCCATCGTTCTTGTCCACGGTCTGTTTGGCAGCCTCGACAACCTTGGCGTACTGGCTCGCGATCTGGTAAACGATCACAATATCATCCAGGTTGATATGCGTAACCACGGTCTTTCACCGAGAGATCCGGTAATGAATTACCCGGCGATGGCGCAGGATCTTGTTGATACTCTGGATGCACAGCAGATCGACAAAGCAACATTTATCGGTCACTCCATGGGCGGTAAAGCGGTAATGGCACTTACTGCACTAGCCTCCGATCGCATCGATAAACTGGTGGCGATCGATATCGCGCCGGTCGACTATCACGTACGCCGTCATGATGAGATTTTTGCGGCTATCAACGCGGTCAGTGAATCGGACGCACAAACTCGCCAGCAAGCAGCAGCAATAATGCGCCAGCATCTTAATGAAGAAGGGGTGATTCAGTTTCTGCTGAAATCTTTTGTTGACGGGGAGTGGCGCTTTAACGTGCCGGTATTGTGGGATCAGTATCCGCATATTGTAGGTTGGGAGAAAATCCCGGCATGGGATCACCCTGCCCTGTTTATCCCTGGCGGCAATTCTCCGTATGTTAGCGAGCAGTACCGTGATGATTTACTGGCTCAATTTCCACAGGCACGGGCGCATGTGATTGCAGGCGCGGGTCACTGGGTCCATGCTGAAAAACCGGATGCGGTATTACGCGCTATCCGTCGCTATCTCAATGATTAA", - "dna_sequence_length": 765, - "functions": [ - "acyl-CoA esterase" - ], - "id": "CDS_673", - "location": [ - [ - "NC_000913", - 712802, - "-", - 765 - ] - ], - "md5": "ed12e9c892eefa9b286e2b46a0b8da5f", - "parent_gene": "", - "protein_md5": "d840bf9ea85caa98f05d63d2ec229980", - "protein_translation": "MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDMRNHGLSPRDPVMNYPAMAQDLVDTLDAQQIDKATFIGHSMGGKAVMALTALASDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND", - "protein_translation_length": 254, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0674" - ], - [ - "gene_synonym", - "EcoGene:EG12197" - ], - [ - "gene_synonym", - "seqA" - ], - [ - "gene_synonym", - "ECK0675" - ], - [ - "gene_synonym", - "hsm-1" - ], - [ - "gene_synonym", - "NP_415213.1" - ], - [ - "gene_synonym", - "GeneID:945272" - ], - [ - "gene_synonym", - "ASAP:ABE-0002343" - ], - [ - "gene_synonym", - "GI:16128663" - ], - [ - "gene_synonym", - "b0687" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFY8" - ] - ], - "dna_sequence": "ATGAAAACGATTGAAGTTGATGATGAACTCTACAGCTATATTGCCAGCCACACTAAGCATATCGGCGAGAGCGCATCCGACATTTTACGGCGTATGTTGAAATTTTCCGCCGCATCACAGCCTGCTGCTCCGGTGACGAAAGAGGTTCGCGTTGCGTCACCTGCTATCGTCGAAGCGAAGCCGGTCAAAACGATTAAAGACAAGGTTCGCGCAATGCGTGAACTTCTGCTTTCGGATGAATACGCAGAGCAAAAGCGAGCGGTCAATCGCTTTATGCTGCTGTTGTCTACACTATATTCTCTTGACGCCCAGGCGTTTGCCGAAGCAACGGAATCGTTGCACGGTCGTACACGCGTTTACTTTGCGGCAGATGAACAAACGCTGCTGAAAAATGGTAATCAGACCAAGCCGAAACATGTGCCAGGCACGCCGTATTGGGTGATCACCAACACCAACACCGGCCGTAAATGCAGCATGATCGAACACATCATGCAGTCGATGCAATTCCCGGCGGAATTGATTGAGAAGGTTTGCGGAACTATCTAA", - "dna_sequence_length": 546, - "functions": [ - "negative modulator of initiation of replication" - ], - "id": "CDS_674", - "location": [ - [ - "NC_000913", - 712987, - "+", - 546 - ] - ], - "md5": "a19d05fceae36c7113bd195a5aa6b8d7", - "parent_gene": "", - "protein_md5": "cd37c86bc2968165e04b37190c24fbe5", - "protein_translation": "MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSAASQPAAPVTKEVRVASPAIVEAKPVKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLDAQAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMIEHIMQSMQFPAELIEKVCGTI", - "protein_translation_length": 181, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945271" - ], - [ - "gene_synonym", - "JW0675" - ], - [ - "gene_synonym", - "ASAP:ABE-0002345" - ], - [ - "gene_synonym", - "blu" - ], - [ - "gene_synonym", - "pgm" - ], - [ - "gene_synonym", - "ECK0676" - ], - [ - "gene_synonym", - "GI:16128664" - ], - [ - "gene_synonym", - "b0688" - ], - [ - "gene_synonym", - "EcoGene:EG12144" - ], - [ - "gene_synonym", - "NP_415214.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36938" - ], - [ - "gene_synonym", - "pgmA" - ] - ], - "dna_sequence": "ATGGCAATCCACAATCGTGCAGGCCAACCTGCACAACAGAGTGATTTGATTAACGTCGCCCAACTGACGGCGCAATATTATGTACTGAAACCAGAAGCAGGGAATGCGGAGCACGCGGTGAAATTCGGTACTTCCGGTCACCGTGGCAGTGCAGCGCGCCACAGCTTTAACGAGCCGCACATTCTGGCGATCGCTCAGGCAATTGCTGAAGAACGTGCGAAAAACGGCATCACTGGCCCTTGCTATGTGGGTAAAGATACTCACGCCCTGTCCGAACCTGCATTCATTTCCGTTCTGGAAGTGCTGGCAGCGAACGGCGTTGATGTCATTGTGCAGGAAAACAATGGCTTCACCCCGACGCCTGCCGTTTCCAATGCCATCCTGGTTCACAATAAAAAAGGTGGCCCGCTGGCAGACGGTATCGTGATTACACCGTCCCATAACCCGCCGGAAGATGGTGGAATCAAATACAATCCGCCAAATGGTGGCCCGGCTGATACCAACGTCACTAAAGTGGTGGAAGACAGGGCCAACGCACTGCTGGCCGATGGCCTGAAAGGCGTGAAGCGTATCTCCCTCGACGAAGCGATGGCATCCGGTCATGTGAAAGAGCAGGATCTGGTGCAGCCGTTCGTGGAAGGTCTGGCCGATATCGTTGATATGGCCGCGATTCAGAAAGCGGGCCTGACGCTGGGCGTTGATCCGCTGGGCGGTTCCGGTATCGAATACTGGAAGCGTATTGGCGAGTATTACAACCTCAACCTGACTATCGTTAACGATCAGGTCGATCAAACCTTCCGCTTTATGCACCTTGATAAAGACGGCGCGATCCGTATGGACTGCTCCTCCGAGTGTGCGATGGCGGGCCTGCTGGCACTGCGTGATAAGTTCGATCTGGCGTTTGCTAACGACCCGGATTATGACCGTCACGGTATCGTCACTCCGGCAGGTTTGATGAATCCGAACCACTACCTGGCGGTGGCAATCAATTACCTGTTCCAGCATCGTCCGCAGTGGGGCAAAGATGTTGCCGTCGGTAAAACGCTGGTTTCATCTGCGATGATCGACCGTGTGGTCAACGACTTGGGCCGTAAACTGGTAGAAGTCCCGGTAGGTTTCAAATGGTTTGTCGATGGTCTGTTCGACGGCAGCTTCGGCTTTGGCGGCGAAGAGAGTGCAGGGGCTTCCTTCCTGCGTTTCGACGGCACGCCGTGGTCCACCGACAAAGACGGCATCATCATGTGTCTGCTGGCGGCGGAAATCACCGCTGTCACCGGTAAGAACCCGCAGGAACACTACAACGAACTGGCAAAACGCTTTGGTGCGCCGAGCTACAACCGTTTGCAGGCAGCTGCGACTTCCGCACAAAAAGCGGCGCTGTCTAAGCTGTCTCCGGAAATGGTGAGCGCCAGCACCCTGGCAGGTGACCCGATCACCGCGCGCCTGACTGCTGCTCCGGGCAACGGTGCTTCTATTGGCGGTCTGAAAGTGATGACTGACAACGGCTGGTTCGCCGCGCGTCCGTCAGGCACGGAAGACGCATATAAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAA", 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"JW0676" - ], - [ - "gene_synonym", - "NP_415215.1" - ], - [ - "gene_synonym", - "ECK0677" - ], - [ - "gene_synonym", - "ASAP:ABE-0002350" - ], - [ - "gene_synonym", - "GI:16128665" - ], - [ - "gene_synonym", - "b0689" - ], - [ - "gene_synonym", - "GeneID:945274" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75737" - ], - [ - "gene_synonym", - "EcoGene:EG14158" - ] - ], - "dna_sequence": "ATGAAGACCAACAGGAGTCTGGTCGTCATAGTGTCACTAATTACCGCCACATTACTGCTGACTGCATGCGCCCAACCTGAACAATCATCATTAGCTGGCGACTGGTTACTGACCCCTAAAGATAAAACCAGAGGATTAACGGGTAGCATTGCGGTAAATATTGCACCTTTCCGGTGTAAGACAAATTGCCGTGGTGATAACTTACCTGATAATACCCGCCGCTGGCAGTTGTCAGGCGGGAACGAAAAAGAACTTACTTATCTTCATAATATGTCAGCACAAGAAAAGGTCGGTTTAAATCCCGGTTGGCAATGCTACACCTCATTTTTTATGCGGGTTTGCCAGGGCAAGCCCGGCACTCGACCGATAGTCAATGAGGATTATGTCAGCGAAAGCGGATTTTTTGGCTCGATGATGCATGTCGGGATTATTGAGTTACGACGCTGCCAGTCAGAAAATTGCCAGCAAGAATTGAAAGCGATAAATACACATTAA", - "dna_sequence_length": 495, - "functions": [ - "lipoprotein" - ], - "id": "CDS_676", - "location": [ - [ - "NC_000913", - 715412, - "+", - 495 - ] - ], - "md5": "ca45a24917b37f02ddb6f0757d0987f4", - "parent_gene": "", - "protein_md5": "03e199ebe2f334f0d0f1823488a834d9", - "protein_translation": "MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTRGLTGSIAVNIAPFRCKTNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPGWQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKAINTH", - "protein_translation_length": 164, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0691" - ], - [ - "gene_synonym", - "ASAP:ABE-0002352" - ], - [ - "gene_synonym", - "EcoGene:EG11777" - ], - [ - "gene_synonym", - "ASAP:ABE-0002355" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37003" - ], - [ - "gene_synonym", - "ECK0678" - ], - [ - "gene_synonym", - "ybfG" - ], - [ - "gene_synonym", - "JW5094" - ], - [ - "gene_synonym", - "GeneID:945287" - ], - [ - "gene_synonym", - "ybfH" - ] - ], - "dna_sequence": "ATGCGTGAAATGAATCAGTTAGTAAATACTGAAGATTCAGCCTGGCCAATAATCCAGAACTGGTTAAAAGACGCCACAAACCATACCGAACTCTTACCGGTTAATAAAGATTTAGCCGAAACCGCACTTTATCAATTACAGGTGACAACAAAATCACCGATGGGTGCGCTTGTCTATGGCTCCGGAGGTCTGCTGATTGATAATGGTTAGTTACGCATAGCAGGATCTGGTCACCCCCGGTTGCCACGAGATCCAGTAAGTTGGACACAACGCCCTGAATTCGCAGGCGTGCGGGCTTTACCCATCGCTGACGATGTCGCAGGGGTAATTTTTGCTCTTAATGGTGGCGATCTTGGGGAAGATACTGGCTGCGTTTATTATTTTGCGCCAGATACGCTGAATTGGGAAAGTCTGGAAGTTGGATATTCTGAGTTTCTTCAGTGGGCATTATCCGGTGATTTAGATACCTTCTATGAAAATGTACGATGGCAGCAATGGCGAGAAGACGTAATAAAATTATCGGCAACGGAAGCCTTCACGTTCTACCCTTTCTTATGGGTACAAAGTGAAGAAGCAAGAACAAGAAAAGTTATTTCGCTTACTGAACTCTGGGAAATGCAGTATCAAATGAAAGAAACATTCACGCAATAA", - "dna_sequence_length": 651, - "id": "CDS_677", - "location": [ - [ - "NC_000913", - 716597, - "-", - 651 - ] - ], - "md5": "b661c9d4d2451757a3c2189588e2fd35", - "parent_gene": "", - "protein_md5": "a9f1215d4fb48a52522112447b18deaf", - "protein_translation": "MREMNQLVNTEDSAWPIIQNWLKDATNHTELLPVNKDLAETALYQLQVTTKSPMGALVYGSGGLLIDNG", - "protein_translation_length": 69, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4636" - ], - [ - "gene_synonym", - "EcoGene:EG12390" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39901" - ], - [ - "gene_synonym", - "ybfI" - ], - [ - "gene_synonym", - "ECK4436" - ], - [ - "gene_synonym", - "GeneID:5625563" - ] - ], - "dna_sequence": "ATCCGGCAGATGTAGGGTCTAAACGCGATCGAACACAGCAACTATTTGCGTAATTATATGGGGCATCTGCGACAAAAACTGGAACAGGATCCGGCCCGGCCTCGCCATTTTATTACTGAAACCGGTATTGGGTATCGGTTTATGCTTTGA", - "dna_sequence_length": 150, - "id": "CDS_678", - "location": [ - [ - "NC_000913", - 716870, - "-", - 150 - ] - ], - "md5": "9f3a76890e9a0f22289a58f83a9aab03", - "parent_gene": "", - "protein_md5": "a41a9686032c0cb106fb3ca299fcc9d0", - "protein_translation": "IRQM", - "protein_translation_length": 4, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128668" - ], - [ - "gene_synonym", - "ECK0680" - ], - [ - "gene_synonym", - "ASAP:ABE-0002360" - ], - [ - "gene_synonym", - "JW0679" - ], - [ - "gene_synonym", - "EcoGene:EG10753" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAF1" - ], - [ - "gene_synonym", - "GeneID:945422" - ], - [ - "gene_synonym", - "b0692" - ], - [ - "gene_synonym", - "potE" - ], - [ - "gene_synonym", - "NP_415219.1" - ] - ], - "dna_sequence": "ATGAGTCAGGCTAAATCGAACAAAATGGGCGTCGTTCAGTTAACCATACTGACGATGGTCAACATGATGGGCTCCGGTATCATCATGCTGCCGACAAAGCTTGCCGAAGTCGGGACAATCTCAATTATCTCCTGGCTGGTGACAGCCGTAGGCTCAATGGCACTGGCATGGGCATTCGCAAAATGCGGTATGTTCAGCCGTAAATCAGGCGGTATGGGCGGTTATGCCGAGTATGCTTTCGGTAAATCCGGTAACTTTATGGCGAACTATACCTACGGCGTCTCACTGCTGATTGCTAACGTCGCGATTGCTATTTCGGCGGTTGGTTACGGCACCGAACTGCTCGGCGCGAGTTTGTCGCCAGTGCAGATTGGTCTTGCGACCATCGGGGTGCTGTGGATTTGTACCGTGGCTAACTTTGGTGGTGCGCGCATTACCGGGCAAATCAGTAGCATTACCGTGTGGGGGGTCATTATTCCGGTCGTCGGTCTGTGCATTATTGGCTGGTTCTGGTTTAGCCCGACGCTGTACGTTGATTCCTGGAATCCGCATCATGCACCGTTCTTCAGTGCGGTAGGTTCTTCCATCGCTATGACGCTGTGGGCTTTTCTTGGTCTGGAGTCTGCGTGTGCGAATACTGATGTAGTGGAAAACCCGGAACGTAATGTGCCAATCGCGGTACTCGGCGGTACGTTAGGTGCGGCGGTGATTTATATCGTCTCCACCAACGTGATTGCCGGGATTGTGCCAAATATGGAGCTGGCAAATTCAACGGCACCATTTGGTCTGGCCTTCGCGCAGATGTTCACGCCGGAAGTGGGTAAAGTCATTATGGCGCTGATGGTGATGTCCTGCTGCGGTTCGCTACTTGGCTGGCAGTTCACCATTGCCCAGGTGTTTAAATCTTCATCTGATGAAGGCTACTTCCCTAAAATTTTCTCCCGTGTAACCAAAGTGGATGCACCGGTGCAGGGAATGTTGACCATTGTGATTATTCAGAGTGGATTGGCACTGATGACCATTAGCCCGTCGCTAAACAGTCAGTTCAACGTGCTGGTTAACCTGGCCGTGGTGACCAATATCATTCCGTATATTCTGTCAATGGCGGCATTAGTCATTATTCAGAAGGTCGCTAATGTGCCCCCCTCAAAAGCGAAAGTTGCAAACTTTGTTGCTTTTGTTGGCGCGATGTATAGCTTTTATGCGCTGTACTCATCCGGGGAAGAAGCCATGCTGTACGGTTCCATCGTGACCTTCCTTGGTTGGACACTGTATGGTCTGGTATCACCACGCTTTGAACTGAAAAATAAACACGGTTAA", - "dna_sequence_length": 1320, - "functions": [ - "putrescine/proton symporter: putrescine/ornithine antiporter" - ], - "id": "CDS_679", - "location": [ - [ - "NC_000913", - 718265, - "-", - 1320 - ] - ], - "md5": "197863c1871fce606e47c85b9b86fbf8", - "parent_gene": "", - "protein_md5": "9d77c70a533b14ea06ac555c8f2a2c77", - "protein_translation": "MSQAKSNKMGVVQLTILTMVNMMGSGIIMLPTKLAEVGTISIISWLVTAVGSMALAWAFAKCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVAIAISAVGYGTELLGASLSPVQIGLATIGVLWICTVANFGGARITGQISSITVWGVIIPVVGLCIIGWFWFSPTLYVDSWNPHHAPFFSAVGSSIAMTLWAFLGLESACANTDVVENPERNVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELANSTAPFGLAFAQMFTPEVGKVIMALMVMSCCGSLLGWQFTIAQVFKSSSDEGYFPKIFSRVTKVDAPVQGMLTIVIIQSGLALMTISPSLNSQFNVLVNLAVVTNIIPYILSMAALVIIQKVANVPPSKAKVANFVAFVGAMYSFYALYSSGEEAMLYGSIVTFLGWTLYGLVSPRFELKNKHG", - "protein_translation_length": 439, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128669" - ], - [ - "gene_synonym", - "JW0680" - ], - [ - "gene_synonym", - "EcoGene:EG10964" - ], - [ - "gene_synonym", - "ASAP:ABE-0002362" - ], - [ - "gene_synonym", - "NP_415220.1" - ], - [ - "gene_synonym", - "ECK0681" - ], - [ - "gene_synonym", - "GeneID:945297" - ], - [ - "gene_synonym", - "speF" - ], - [ - "gene_synonym", - "b0693" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24169" - ] - ], - "dna_sequence": "ATGTCAAAATTAAAAATTGCGGTTAGTGATTCTTGCCCGGACTGTTTTACCACGCAGCGAGAATGTATCTACATTAATGAAAGTCGTAATATCGATGTGGCGGCAATAGTTTTATCGCTCAACGATGTTACATGCGGAAAACTCGATGAAATCGATGCCACGGGTTATGGCATCCCGGTATTTATTGCTACTGAAAATCAAGAACGTGTACCCGCAGAGTATTTGCCCCGTATTTCGGGTGTCTTTGAGAATTGCGAATCGCGACGAGAATTTTATGGTCGCCAGTTAGAAACCGCTGCCAGCCATTATGAAACTCAACTGCGCCCACCTTTCTTCCGCGCACTGGTCGATTATGTCAATCAAGGTAACAGCGCGTTTGATTGCCCTGGTCATCAGGGCGGCGAATTTTTCCGTCGCCATCCGGCGGGGAATCAGTTTGTGGAATACTTTGGTGAGGCGCTGTTCCGTGCCGACTTGTGCAACGCCGACGTAGCGATGGGCGATCTGCTGATTCACGAAGGCGCGCCATGCATTGCACAGCAACATGCGGCAAAAGTGTTTAATGCCGATAAAACCTACTTCGTTTTAAATGGCACTTCATCTTCTAACAAAGTGGTTTTAAACGCCCTGCTAACACCGGGTGATCTGGTGCTGTTTGATCGCAATAACCACAAATCTAACCACCACGGAGCGTTGCTACAGGCTGGTGCAACACCGGTTTATCTGGAAACGGCACGTAACCCGTATGGCTTTATCGGTGGCATTGATGCGCACTGTTTTGAAGAAAGTTACCTGCGTGAGCTGATCGCGGAAGTCGCACCGCAGCGGGCAAAAGAGGCTCGTCCTTTCCGCCTCGCTGTGATTCAGTTAGGCACCTACGACGGTACGATTTATAACGCCCGCCAAGTGGTGGATAAAATTGGTCATCTGTGTGACTACATCCTGTTTGACTCAGCATGGGTCGGCTATGAACAGTTTATTCCGATGATGGCGGACTGTTCGCCGCTGTTGCTGGATCTTAATGAGAACGATCCGGGTATTCTGGTTACGCAATCTGTGCATAAACAACAGGCTGGTTTTTCTCAGACTTCACAAATTCATAAAAAAGACAGCCACATCAAAGGGCAACAGCGTTATGTACCGCACAAACGCATGAACAACGCCTTTATGATGCACGCCTCCACCAGCCCGTTCTATCCGCTGTTTGCCGCACTGAATATCAACGCCAAAATGCATGAAGGTGTCAGCGGTCGTAATATGTGGATGGATTGTGTGGTAAATGGCATTAATGCCCGCAAACTGATCCTCGATAACTGTCAGCATATTCGTCCGTTCGTACCTGAACTGGTGGATGGTAAACCCTGGCAGTCGTATGAAACAGCGCAAATTGCGGTTGATCTGCGCTTCTTCCAGTTTGTACCAGGGGAACACTGGCATTCTTTTGAAGGCTATGCAGAGAATCAATACTTTGTCGATCCATGCAAACTGTTGCTGACAACCCCAGGTATTGATGCACGTAACGGCGAATATGAAGCGTTCGGTGTACCCGCGACGATTCTTGCTAACTTCCTGCGCGAAAATGGCGTAGTGCCGGAAAAATGCGATCTTAACTCCATCCTCTTCCTGCTGACTCCGGCAGAAGATATGGCCAAACTTCAGCAACTTGTTGCCCTGCTGGTACGCTTCGAAAAACTGCTTGAGTCCGACGCGCCATTAGCAGAAGTGCTACCTTCCATCTACAAACAGCATGAAGAGCGCTACGCCGGTTATACCCTGCGTCAGTTGTGTCAGGAAATGCATGATTTGTATGCCCGCCACAACGTGAAACAACTGCAAAAAGAGATGTTCCGTAAGGAGCACTTCCCACGCGTCAGCATGAATCCGCAAGAAGCCAACTACGCCTATTTACGCGGTGAAGTGGAACTGGTTCGTCTGCCGGATGCAGAAGGCCGTATCGCTGCCGAAGGTGCGCTTCCTTATCCTCCGGGTGTGCTGTGTGTTGTTCCGGGTGAAATCTGGGGTGGTGCTGTTCTGCGTTACTTCAGCGCTCTGGAAGAAGGGATCAACCTGCTGCCAGGTTTTGCACCGGAGCTGCAGGGTGTCTATATCGAAGAACATGATGGTCGTAAGCAAGTTTGGTGCTATGTCATCAAGCCTCGTGATGCGCAAAGCACCCTGTTGAAAGGGGAAAAATTATGA", 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"MSKLKIAVSDSCPDCFTTQRECIYINESRNIDVAAIVLSLNDVTCGKLDEIDATGYGIPVFIATENQERVPAEYLPRISGVFENCESRREFYGRQLETAASHYETQLRPPFFRALVDYVNQGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEALFRADLCNADVAMGDLLIHEGAPCIAQQHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPVYLETARNPYGFIGGIDAHCFEESYLRELIAEVAPQRAKEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMHASTSPFYPLFAALNINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELVDGKPWQSYETAQIAVDLRFFQFVPGEHWHSFEGYAENQYFVDPCKLLLTTPGIDARNGEYEAFGVPATILANFLRENGVVPEKCDLNSILFLLTPAEDMAKLQQLVALLVRFEKLLESDAPLAEVLPSIYKQHEERYAGYTLRQLCQEMHDLYARHNVKQLQKEMFRKEHFPRVSMNPQEANYAYLRGEVELVRLPDAEGRIAAEGALPYPPGVLCVVPGEIWGGAVLRYFSALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPRDAQSTLLKGEKL", - "protein_translation_length": 732, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_001165310.1" - ], - [ - "gene_synonym", - "GI:145698231" - ], - [ - "gene_synonym", - "b4590" - ], - [ - "gene_synonym", - "GeneID:948953" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46121" - ], - [ - "gene_synonym", - "ECK4400" - ], - [ - "gene_synonym", - "ybfK" - ], - [ - "gene_synonym", - "EcoGene:EG12869" - ] - ], - "dna_sequence": "ATGCAGAAACCCTTACCAGTCAGGTGGCTGATAATACAAGGGTTAACAGAGAATGAGCACTGCGGAATACAGGCATATGCCTGTAATACAGAGAGTCAGGAAGACCTGTACGCTGAAGTGCCCTTAGTCGGTAGACTAACGGGCATTGAAGAAGTGAAAGTCGAAGCTATTGCGATGAGCAAACTTCATAATATGAGTTGTCCGCCTTATATGGGGCATAGTGCGGCTGTTATTTTCCATTTAATTTACCTTTCCTGA", - "dna_sequence_length": 258, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_681", - "location": [ - [ - "NC_000913", - 720583, - "+", - 258 - ] - ], - "md5": "55e9e7c5ebfa2c0a7dc8eb5914c2f0b9", - "parent_gene": "", - "protein_md5": "0bdd73c75df3d4518d75cc2b2f5c0de0", - "protein_translation": "MQKPLPVRWLIIQGLTENEHCGIQAYACNTESQEDLYAEVPLVGRLTGIEEVKVEAIAMSKLHNMSCPPYMGHSAAVIFHLIYLS", - "protein_translation_length": 85, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002366" - ], - [ - "gene_synonym", - "GeneID:945302" - ], - [ - "gene_synonym", - "ECK0682" - ], - [ - "gene_synonym", - "EcoGene:EG10517" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21866" - ], - [ - "gene_synonym", - "GI:16128670" - ], - [ - "gene_synonym", - "JW5096" - ], - [ - "gene_synonym", - "kdpE" - ], - [ - "gene_synonym", - "b0694" - ], - [ - "gene_synonym", - "NP_415222.1" - ] - ], - "dna_sequence": "GTGACAAACGTTCTGATTGTTGAAGATGAACAGGCTATTCGTCGCTTTCTGCGCACGGCGCTGGAGGGCGACGGGATGCGCGTCTTTGAGGCCGAAACGCTGCAACGCGGCTTGCTGGAAGCGGCAACCCGTAAGCCAGATTTGATTATTCTCGATCTCGGCCTGCCCGATGGTGATGGGATTGAGTTTATCCGCGACCTGCGCCAGTGGAGCGCGGTGCCGGTGATTGTGCTTTCCGCACGCAGCGAAGAGAGCGACAAAATCGCCGCGCTGGATGCCGGAGCGGATGATTATCTGAGTAAGCCGTTTGGCATTGGCGAATTGCAGGCCCGTCTGCGCGTCGCATTACGCCGCCACTCTGCCACCACCGCGCCCGATCCGCTGGTAAAATTTTCCGATGTTACCGTCGATTTAGCCGCCCGCGTGATTCACCGGGGTGAGGAAGAGGTGCATCTCACACCAATTGAGTTCCGCCTGCTGGCGGTGCTGCTCAACAATGCCGGAAAAGTACTCACCCAGCGCCAGCTCCTTAACCAGGTGTGGGGGCCAAACGCGGTCGAACACAGTCACTATTTGCGTATTTATATGGGACATCTGCGACAAAAACTGGAACAGGATCCCGCCCGCCCACGCCATTTCATTACTGAAACCGGTATTGGCTATCGGTTTATGCTTTGA", - "dna_sequence_length": 678, - "functions": [ - "response regulator in two-component regulatory system with KdpD" - ], - "id": "CDS_682", - "location": [ - [ - "NC_000913", - 721733, - "-", - 678 - ] - ], - "md5": "4624c796f754056f2ebe61068c269202", - "parent_gene": "", - "protein_md5": "ca0f00f07f0dfb8c751337fc596f986c", - "protein_translation": "MTNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATTAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETGIGYRFML", - "protein_translation_length": 225, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "kac" - ], - [ - "gene_synonym", - "JW0683" - ], - [ - "gene_synonym", - "EcoGene:EG10516" - ], - [ - "gene_synonym", - "ECK0683" - ], - [ - "gene_synonym", - "NP_415223.1" - ], - [ - "gene_synonym", - "GeneID:946744" - ], - [ - "gene_synonym", - "GI:16128671" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21865" - ], - [ - "gene_synonym", - "ASAP:ABE-0002368" - ], - [ - "gene_synonym", - "kdpD" - ], - [ - "gene_synonym", - "b0695" - ] - ], - "dna_sequence": "ATGAATAACGAACCCTTACGTCCCGACCCCGATCGTCTGCTGGAACAAACTGCCGCGCCGCATCGGGGGAAGCTGAAAGTTTTCTTCGGTGCCTGTGCAGGCGTCGGGAAGACCTGGGCGATGCTGGCAGAAGCCCAGCGACTGCGGGCGCAAGGGCTGGATATTGTGGTTGGCGTGGTAGAAACCCACGGGCGAAAAGATACCGCCGCCATGCTGGAAGGGCTGGCTGTTCTGCCGTTAAAACGCCAGGCGTACCGTGGGCGGCATATCAGCGAGTTTGATCTCGATGCCGCCCTCGCCCGCCGCCCGGCGCTGATCTTAATGGACGAACTGGCGCACAGTAATGCGCCAGGTTCCCGTCATCCCAAACGCTGGCAGGATATCGAAGAACTGCTGGAAGCTGGCATTGATGTTTTCACTACCGTCAACGTTCAGCATCTGGAAAGTCTGAATGATGTGGTCAGCGGCGTCACCGGAATTCAGGTACGGGAAACCGTGCCCGATCCTTTTTTCGATGCCGCCGACGACGTGGTGCTGGTGGACTTGCCCCCGGACGATCTGCGCCAGCGGCTGAAAGAAGGCAAAGTCTATATTGCCGGGCAGGCGGAGCGCGCCATTGAACATTTTTTCCGCAAAGGTAATCTGATCGCCCTGCGCGAACTGGCACTGCGCCGTACTGCCGATCGCGTTGATGAGCAAATGCGCGCCTGGCGGGGGCATCCTGGCGAAGAGAAAGTGTGGCACACGCGCGACGCGATCCTTTTATGCATCGGCCATAACACCGGCAGCGAAAAACTGGTCCGCGCAGCGGCGCGGCTGGCGTCACGGCTGGGTAGCGTCTGGCACGCGGTGTATGTTGAAACCCCTGCCCTGCACCGCTTACCGGAAAAAAAACGTCGGGCAATTCTCAGCGCCTTACGTCTGGCGCAGGAACTGGGCGCGGAGACGGCAACACTTTCTGATCCAGCGGAAGAGAAAGCGGTAGTGCGTTATGCCCGTGAACATAATCTCGGCAAGATTATTCTCGGTCGCCCGGCCTCGCGCCGCTGGTGGCGTCGGGAAACGTTTGCTGACCGACTGGCGCGCATCGCCCCCGATCTCGATCAGGTGCTGGTCGCGCTTGATGAACCACCCGCCCGCACGATTAACAACGCGCCGGATAACCGCTCTTTTAAAGACAAGTGGCGTGTACAAATTCAGGGATGCGTGGTTGCCGCCGCGTTATGCGCCGTTATCACCTTAATTGCCATGCAGTGGCTGATGGCGTTTGATGCCGCCAACCTGGTGATGCTGTATCTGCTTGGCGTGGTGGTGGTGGCGCTATTTTATGGACGCTGGCCTTCAGTGGTTGCCACCGTCATTAATGTAGTGAGTTTCGATCTCTTTTTTATCGCCCCACGCGGCACGCTCGCCGTCTCTGATGTGCAATATCTGCTGACCTTCGCGGTGATGTTAACCGTCGGGCTGGTGATCGGGAACCTTACTGCTGGCGTGCGTTATCAGGCGCGGGTAGCCCGTTACCGCGAGCAACGCACACGGCACTTATATGAAATGTCGAAAGCTCTGGCGGTGGGCCGCAGTCCGCAGGATATCGCTGCCACCAGCGAACAATTTATTGCCTCCACGTTTCATGCCCGCAGTCAGGTGTTGTTGCCCGATGACAACGGTAAATTGCAGCCGTTAACACATCCGCAAGGAATGACGCCGTGGGACGATGCCATCGCGCAGTGGAGTTTTGATAAAGGCCTGCCTGCGGGCGCGGGCACCGACACGTTACCCGGTGTACCGTACCAGATTTTGCCGCTAAAAAGCGGCGAGAAAACCTACGGGCTGGTGGTGGTGGAGCCGGGGAATCTGCGCCAGTTGATGATCCCGGAACAGCAGCGCCTGCTGGAGACGTTTACGCTGTTAGTCGCCAATGCCCTTGAGCGGCTGACGCTAACCGCCAGCGAAGAACAGGCGCGGATGGCAAGCGAACGTGAACAGATCCGCAACGCCCTGCTGGCGGCGCTTTCGCATGATTTACGCACGCCGCTTACGGTGCTGTTTGGTCAGGCAGAAATCTTAACGCTCGATCTGGCAAGCGAAGGATCACCCCACGCCCGCCAGGCCAGCGAGATCCGTCAGCATGTGCTGAACACTACCCGACTGGTGAATAATCTACTGGATATGGCGCGAATTCAGTCCGGCGGCTTTAATTTGAAGAAAGAGTGGTTAACGCTGGAAGAAGTAGTCGGCAGCGCGCTGCAAATGCTGGAACCGGGTTTATCGTCGCCCATCAATCTTTCTCTGCCAGAACCGCTGACCTTAATCCACGTTGACGGGCCACTCTTTGAACGGGTGCTGATTAATCTGCTGGAGAACGCGGTGAAATATGCGGGTGCGCAGGCCGAAATTGGTATCGATGCCCACGTTGAGGGCGAAAATCTACAACTGGATGTCTGGGATAACGGCCCCGGTCTTCCGCCAGGCCAGGAGCAGACGATATTTGATAAGTTTGCTCGCGGGAATAAAGAGTCGGCAGTACCGGGGGTAGGGCTTGGACTGGCAATTTGTCGGGCGATAGTGGATGTACACGGGGGCACTATTACCGCGTTCAACCGACCGGAAGGTGGTGCCTGTTTTCGTGTTACACTTCCCCAGCAAACTGCCCCTGAACTTGAAGAATTTCATGAGGATATGTGA", 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"MNNEPLRPDPDRLLEQTAAPHRGKLKVFFGACAGVGKTWAMLAEAQRLRAQGLDIVVGVVETHGRKDTAAMLEGLAVLPLKRQAYRGRHISEFDLDAALARRPALILMDELAHSNAPGSRHPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGIQVRETVPDPFFDAADDVVLVDLPPDDLRQRLKEGKVYIAGQAERAIEHFFRKGNLIALRELALRRTADRVDEQMRAWRGHPGEEKVWHTRDAILLCIGHNTGSEKLVRAAARLASRLGSVWHAVYVETPALHRLPEKKRRAILSALRLAQELGAETATLSDPAEEKAVVRYAREHNLGKIILGRPASRRWWRRETFADRLARIAPDLDQVLVALDEPPARTINNAPDNRSFKDKWRVQIQGCVVAAALCAVITLIAMQWLMAFDAANLVMLYLLGVVVVALFYGRWPSVVATVINVVSFDLFFIAPRGTLAVSDVQYLLTFAVMLTVGLVIGNLTAGVRYQARVARYREQRTRHLYEMSKALAVGRSPQDIAATSEQFIASTFHARSQVLLPDDNGKLQPLTHPQGMTPWDDAIAQWSFDKGLPAGAGTDTLPGVPYQILPLKSGEKTYGLVVVEPGNLRQLMIPEQQRLLETFTLLVANALERLTLTASEEQARMASEREQIRNALLAALSHDLRTPLTVLFGQAEILTLDLASEGSPHARQASEIRQHVLNTTRLVNNLLDMARIQSGGFNLKKEWLTLEEVVGSALQMLEPGLSSPINLSLPEPLTLIHVDGPLFERVLINLLENAVKYAGAQAEIGIDAHVEGENLQLDVWDNGPGLPPGQEQTIFDKFARGNKESAVPGVGLGLAICRAIVDVHGGTITAFNRPEGGACFRVTLPQQTAPELEEFHEDM", - "protein_translation_length": 894, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "kac" - ], - [ - "gene_synonym", - "ASAP:ABE-0002374" - ], - [ - "gene_synonym", - "ECK0684" - ], - [ - "gene_synonym", - "NP_415224.1" - ], - [ - "gene_synonym", - "JW0684" - ], - [ - "gene_synonym", - "EcoGene:EG10515" - ], - [ - "gene_synonym", - "GeneID:947508" - ], - [ - "gene_synonym", - "GI:16128672" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03961" - ], - [ - "gene_synonym", - "kdpC" - ], - [ - "gene_synonym", - "b0696" - ] - ], - "dna_sequence": "ATGAGTGGATTACGTCCGGCATTATCAACATTTATCTTTCTGTTATTGATTACTGGCGGCGTTTACCCGCTGCTGACCACCGTACTGGGGCAATGGTGGTTTCCCTGGCAGGCCAATGGTTCGTTGATTCGTGAAGGTGATACGGTGCGCGGTTCGGCATTAATCGGGCAGAATTTTACCGGCAACGGCTATTTTCATGGTCGCCCGTCGGCAACGGCAGAAATGCCCTATAATCCACAGGCTTCTGGCGGGAGCAATCTGGCGGTCAGTAACCCTGAGCTGGATAAACTAATAGCCGCACGCGTTGCTGCATTACGGGCCGCTAACCCGGATGCCAGCGCGAGCGTTCCGGTTGAACTGGTGACGGCATCGGCAAGCGGGCTGGACAATAATATCACCCCGCAAGCGGCGGCCTGGCAAATCCCACGCGTGGCGAAAGCGCGTAATCTCAGCGTTGAACAGCTCACGCAACTGATCGCAAAATACAGCCAACAACCGCTGGTGAAATATATCGGCCAGCCGGTTGTCAACATTGTTGAACTCAATCTGGCGCTGGATAAACTTGATGAATAA", - "dna_sequence_length": 573, - "functions": [ - "potassium translocating ATPase, subunit C" - ], - "id": "CDS_684", - "location": [ - [ - "NC_000913", - 724979, - "-", - 573 - ] - ], - "md5": "92d51efe0cd81835b56b10586d210c0b", - "parent_gene": "", - "protein_md5": "192f33dd0c0de4cce9c54d1a4eec6e68", - "protein_translation": "MSGLRPALSTFIFLLLITGGVYPLLTTVLGQWWFPWQANGSLIREGDTVRGSALIGQNFTGNGYFHGRPSATAEMPYNPQASGGSNLAVSNPELDKLIAARVAALRAANPDASASVPVELVTASASGLDNNITPQAAAWQIPRVAKARNLSVEQLTQLIAKYSQQPLVKYIGQPVVNIVELNLALDKLDE", - "protein_translation_length": 190, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "kac" - ], - [ - "gene_synonym", - "GeneID:947450" - ], - [ - "gene_synonym", - "ASAP:ABE-0002376" - ], - [ - "gene_synonym", - "ECK0685" - ], - [ - "gene_synonym", - "JW0685" - ], - [ - "gene_synonym", - "EcoGene:EG10514" - ], - [ - "gene_synonym", - "NP_415225.1" - ], - [ - "gene_synonym", - "GI:16128673" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03960" - ], - [ - "gene_synonym", - "kdpB" - ], - [ - "gene_synonym", - "b0697" - ] - ], - "dna_sequence": "ATGAGTCGTAAACAACTGGCGCTATTCGAACCAACACTTGTCGTTCAGGCGCTGAAAGAAGCGGTGAAAAAATTAAACCCGCAGGCGCAATGGCGCAATCCGGTGATGTTTATCGTCTGGATCGGCAGTCTGCTGACCACCTGTATTAGCATCGCGATGGCAAGCGGTGCGATGCCCGGCAATGCGCTGTTTAGCGCGGCCATTAGCGGTTGGCTGTGGATCACCGTACTGTTCGCTAATTTCGCCGAGGCGCTGGCAGAAGGCCGCAGTAAAGCGCAGGCCAACAGTCTGAAAGGGGTGAAAAAAACTGCCTTTGCCCGCAAGCTGCGTGAGCCGAAATATGGCGCTGCGGCGGACAAAGTTCCTGCCGACCAACTTCGTAAAGGCGATATCGTACTGGTAGAAGCTGGCGATATTATCCCCTGCGATGGTGAAGTTATTGAAGGGGGTGCATCGGTCGATGAAAGCGCCATCACCGGGGAATCGGCACCGGTGATCCGTGAATCCGGCGGCGATTTTGCCTCCGTCACCGGCGGCACGCGTATTCTTTCTGACTGGCTGGTGATTGAGTGTAGCGTTAACCCCGGCGAGACATTTCTGGATCGGATGATCGCGATGGTGGAAGGCGCACAGCGACGCAAAACGCCGAACGAAATTGCCCTGACCATTCTGCTGATTGCCCTGACTATCGTCTTTTTACTGGCAACCGCCACGCTGTGGCCGTTTTCCGCGTGGGGCGGTAATGCAGTCAGCGTAACGGTACTGGTGGCGCTGCTGGTCTGTCTGATCCCAACCACTATTGGCGGCCTGTTGTCAGCGATCGGCGTCGCCGGGATGAGCCGGATGCTAGGCGCGAATGTGATTGCCACCAGCGGACGTGCAGTTGAAGCGGCAGGTGACGTTGACGTTCTGCTACTGGATAAAACCGGCACCATCACACTCGGTAACCGTCAGGCGTCGGAGTTTATCCCCGCGCAGGGCGTGGATGAAAAAACGCTGGCTGACGCCGCACAACTGGCTTCGCTGGCTGATGAAACGCCGGAAGGCCGCAGTATTGTGATCCTCGCCAAGCAGCGTTTTAACCTGCGCGAGCGCGATGTGCAGTCGCTCCATGCCACCTTTGTACCGTTTACTGCGCAAAGCCGGATGAGCGGGATCAACATCGACAACCGCATGATCCGTAAAGGTTCTGTCGATGCCATTCGTCGCCATGTTGAGGCTAACGGTGGTCACTTCCCTACCGATGTTGATCAAAAAGTCGATCAGGTTGCGCGTCAGGGAGCCACGCCGCTGGTGGTGGTGGAAGGTTCTCGTGTGCTGGGCGTTATTGCGCTGAAAGATATCGTCAAAGGCGGTATTAAAGAGCGCTTCGCCCAGCTGCGCAAAATGGGCATTAAAACGGTGATGATTACCGGCGATAACCGTCTGACTGCCGCCGCGATTGCTGCGGAAGCGGGTGTCGATGATTTTCTCGCCGAAGCGACACCGGAGGCCAAGCTGGCATTGATCCGTCAGTATCAGGCGGAAGGTCGTTTGGTAGCGATGACCGGCGACGGCACCAACGATGCTCCGGCGCTGGCGCAGGCAGATGTCGCGGTGGCGATGAACTCCGGCACCCAGGCGGCGAAAGAGGCGGGCAATATGGTCGATCTCGACTCTAACCCGACCAAGTTGATCGAGGTGGTGCACATTGGCAAACAGATGCTGATGACCCGTGGCTCGCTGACCACCTTCAGCATTGCCAACGATGTGGCGAAATACTTCGCCATTATTCCGGCGGCATTCGCGGCAACGTATCCGCAGTTAAATGCGCTGAACATCATGTGCCTGCATTCGCCCGACTCCGCAATCCTCAGTGCGGTGATTTTCAACGCCTTGATTATCGTCTTTTTGATTCCCCTGGCGTTAAAAGGCGTGAGTTATAAACCGCTTACCGCTTCTGCCATGTTGCGCCGTAACTTATGGATTTACGGTCTGGGTGGGCTGCTGGTGCCGTTTATCGGTATCAAAGTCATTGATTTACTGCTGACCGTTTGCGGTCTGGTGTGA", 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"MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSLLTTCISIAMASGAMPGNALFSAAISGWLWITVLFANFAEALAEGRSKAQANSLKGVKKTAFARKLREPKYGAAADKVPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITGESAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNEIALTILLIALTIVFLLATATLWPFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNIMCLHSPDSAILSAVIFNALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLGGLLVPFIGIKVIDLLLTVCGLV", - "protein_translation_length": 682, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0686" - ], - [ - "gene_synonym", - "kac" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03959" - ], - [ - "gene_synonym", - "JW0686" - ], - [ - "gene_synonym", - "ASAP:ABE-0002381" - ], - [ - "gene_synonym", - "GI:16128674" - ], - [ - "gene_synonym", - "EcoGene:EG10513" - ], - [ - "gene_synonym", - "NP_415226.1" - ], - [ - "gene_synonym", - "b0698" - ], - [ - "gene_synonym", - "kdpA" - ], - [ - "gene_synonym", - "GeneID:946045" - ] - ], - "dna_sequence": "ATGGCTGCGCAAGGGTTCTTACTGATCGCCACGTTTTTACTGGTGTTAATGGTGCTGGCGCGTCCTTTAGGCAGCGGGCTGGCGCGGCTGATTAATGACATTCCTCTTCCCGGTACAACGGGCGTTGAGCGCGTACTTTTTCGCGCACTTGGCGTCTCTGACCGTGAGATGAACTGGAAGCAATATCTTTGTGCCATTCTCGGCCTGAACATGCTGGGGCTGGCGGTGCTGTTTTTTATGTTGCTCGGTCAGCACTATCTGCCGCTTAATCCACAGCAGTTGCCAGGGCTGTCGTGGGATCTGGCGCTGAATACCGCCGTCAGCTTTGTCACCAATACCAACTGGCAATCTTATAGCGGTGAAACCACGTTGAGCTATTTCAGCCAGATGGCGGGCTTAACGGTGCAAAACTTTCTTTCTGCCGCCAGCGGGATTGCGGTGATTTTTGCCCTCATCCGTGCGTTTACCCGCCAGAGCATGAGCACGCTCGGGAATGCCTGGGTCGATCTGCTACGCATCACGTTATGGGTGCTAGTCCCTGTGGCGTTGTTGATTGCACTGTTTTTTATTCAACAAGGTGCGCTGCAAAACTTTCTGCCTTATCAGGCTGTGAATACCGTTGAAGGAGCGCAACAGCTGTTACCCATGGGGCCTGTAGCTTCTCAGGAAGCGATCAAGATGCTCGGTACTAACGGCGGTGGCTTCTTTAATGCCAACTCGTCGCATCCGTTTGAAAACCCAACCGCACTGACCAACTTCGTGCAGATGCTGGCGATCTTCTTGATCCCAACGGCGCTGTGCTTTGCCTTTGGTGAAGTGATGGGCGATCGCCGCCAGGGGCGCATGTTGCTGTGGGCGATGTCAGTGATTTTTGTCATCTGCGTAGGCGTGGTGATGTGGGCAGAAGTTCAGGGTAATCCTCATCTGCTGGCACTGGGCACGGACAGCAGCATCAATATGGAAGGTAAAGAGAGCCGTTTCGGCGTGCTGGTCAGTAGCCTGTTTGCGGTCGTGACGACGGCGGCTTCCTGTGGCGCGGTGATTGCGATGCATGATTCGTTTACCGCTCTCGGTGGCATGGTGCCGATGTGGCTGATGCAAATTGGTGAAGTGGTGTTCGGCGGTGTCGGTTCTGGTCTTTACGGCATGATGCTGTTTGTCCTGCTGGCGGTGTTTATTGCCGGGCTGATGATTGGTCGTACACCGGAATATCTGGGTAAAAAAATCGACGTACGCGAGATGAAACTGACTGCACTGGCAATTCTGGTTACCCCGACGCTGGTGCTGATGGGCGCGGCGTTGGCGATGATGACCGACGCCGGACGTAGCGCCATGCTCAACCCTGGCCCGCATGGTTTTAGCGAAGTGCTGTACGCCGTGTCATCCGCCGCTAACAACAACGGCAGCGCCTTTGCCGGATTAAGCGCCAACTCTCCGTTCTGGAACTGTTTACTGGCGTTCTGCATGTTTGTCGGTCGCTTCGGGGTGATTATCCCGGTGATGGCAATTGCCGGTTCGCTGGTGAGTAAAAAGAGCCAAGCCGCCAGCTCCGGCACGCTGCCAACGCACGGCCCGCTGTTTGTTGGCCTGTTAATCGGCACCGTGTTGCTGGTTGGCGCACTGACCTTTATCCCTGCCCTGGCGCTTGGTCCGGTGGCGGAATATCTCTCCTGA", 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"ECK0687" - ], - [ - "gene_synonym", - "EcoGene:EG12126" - ], - [ - "gene_synonym", - "JW0687" - ], - [ - "gene_synonym", - "GeneID:948946" - ], - [ - "gene_synonym", - "YP_588443.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36937" - ], - [ - "gene_synonym", - "b4513" - ], - [ - "gene_synonym", - "ASAP:ABE-0285034" - ], - [ - "gene_synonym", - "GI:94541101" - ], - [ - "gene_synonym", - "kdpF" - ] - ], - "dna_sequence": "GTGAGTGCAGGCGTGATAACCGGCGTATTGCTGGTGTTTTTATTACTGGGTTATCTGGTTTATGCCCTGATCAATGCGGAGGCGTTCTGA", - "dna_sequence_length": 90, - "functions": [ - "potassium ion accessory transporter subunit" - ], - "id": "CDS_687", - "location": [ - [ - "NC_000913", - 728821, - "-", - 90 - ] - ], - "md5": "a8d6a36ef60eaebd9950bd18c4685203", - "parent_gene": "", - "protein_md5": "f376035c94d52999bbb4d6eb6a8c4bf4", - "protein_translation": "MSAGVITGVLLVFLLLGYLVYALINAEAF", - "protein_translation_length": 29, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947452" - ], - [ - "gene_synonym", - "EcoGene:EG11521" - ], - [ - "gene_synonym", - "JW0688" - ], - [ - "gene_synonym", - "GI:16128675" - ], - [ - "gene_synonym", - "ECK0688" - ], - [ - "gene_synonym", - "ASAP:ABE-0002386" - ], - [ - "gene_synonym", - "ybfA" - ], - [ - "gene_synonym", - "b0699" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAU2" - ], - [ - "gene_synonym", - "NP_415228.1" - ] - ], - "dna_sequence": "ATGGAACTCTACAGAGAATATCCTGCATGGCTTATCTTTTTACGCCGTACTTATGCGGTTGCAGCGGGCGTTCTGGCGCTGCCTTTCATGCTTTTCTGGAAAGACCGCGCCCGCTTTTACAGCTACCTGCATCGCGTCTGGTCGAAAACCAGCGATAAACCGGTGTGGATGGATCAGGCCGAAAAGGCAACTGGTGATTTTTATTGA", - "dna_sequence_length": 207, - "functions": [ - "DUF2517 family protein" - ], - "id": "CDS_688", - "location": [ - [ - "NC_000913", - 729134, - "+", - 207 - ] - ], - "md5": "19bd5e92afd5e37383d640d4b3e1841e", - "parent_gene": "", - "protein_md5": "6c5a711ba684b1984664e98a5dcacbc4", - "protein_translation": "MELYREYPAWLIFLRRTYAVAAGVLALPFMLFWKDRARFYSYLHRVWSKTSDKPVWMDQAEKATGDFY", - "protein_translation_length": 68, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002392" - ], - [ - "gene_synonym", - "JW0689" - ], - [ - "gene_synonym", - "ECK0689" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16918" - ], - [ - "gene_synonym", - "GI:16128676" - ], - [ - "gene_synonym", - "NP_415229.1" - ], - [ - "gene_synonym", - "b0700" - ], - [ - "gene_synonym", - "EcoGene:EG10848" - ], - [ - "gene_synonym", - "GeneID:945306" - ], - [ - "gene_synonym", - "rhsC" - ] - ], - "dna_sequence": "ATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGGGTGACGTCCGGCCATCCGGTCAATCCGCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCACCTGTTTCCCGGTGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGCTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCGGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCCCGCGGCGAACTGGCGGCGGTGTATGACCGCAGCAATACACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGACCGGAAATCTGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGTTACACGTATCAGTATGAGAAGGACCGCATCACCATCACCGACAGCCTGAACCGCCGTGAAGTCCTGCACACGCAGGGTGAAGGCGGGCTGAAGCGGGTGGTGAAAAAGGAACACGCGGACGGCAGCGTCACGCAGAGTCAGTTTGACGCGGTGGGCAGGCTCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAATACAGTCCGGATGTGGTGACGGGCCTCATCACGCGCATCACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCACTGACTGTTCCGGTTATGTAACCCGCTATGACCATGACCGTTTTGGTCAGGTGACGGCGGTGCACCGCGAGGAAGGGCTGAGTCAGTACCGCGCATACGACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACGCCGCCGGTGACCTGACCACCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAAGCCATCTGTACCACGCAGGGCGGTCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTCGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGGCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAATGGCGAAACCGCAGAGCGGTGGCAGTATGACGAACGCGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGACGGTGCACTATGGTTATGACAGTAAAGGCCGCCTCGCCAGTGAACACCTGACGGTGCATCATCCGCAGACGAATGAACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCACAGGGACTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGCTGGCTGTCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGAACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATACCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCGCCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTATGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGCCTGACCACGATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGTGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGCGCAGATGCAAAGCCAGATGGACCCGGTATACACGCCGGCGCGAAAAATTCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCACGGAAGGGACAACAGCGTGGTACGCAGAATACGATGAATGGGGTAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGGCTGAAAGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGATCTCAAATATAGATCCATTAGGATTAGAAACACTAAAATGCATTAAGCCACTGCATTCAATGGGCGGAACTGGTGAAAGAAGCGGTCCAGATATATGGGGGAATCCGTTCTATCATCAATATCTTTGTGTCCCAGATGGTAAAGGGGACTATACTTGTGGTGGCCAAGACCAACGGGGAGAATCAAAAGGAGATGGTCTATGGGGGCCAGGTAAAGCAAGTAATGATACAAAAGAAGCTGCTGGCCGTTGTGACCTCGTTGAAACCGATAATAGTTGTGTGGAGAACTGTTTAAAAGGGAAGTTTAAAGAGGTAAGGCCGCGTTATTCTGTATTGCCTGATATATTCACACCTATAAATTTAGGGCTATTTAAAAACTGCCAAGACTGGTCTAATGATTCTTTAGAAACATGTAAGATGAAGTGCTCCGGAAATAACATTGGACGTTTTATTAGATTTGTATTCACCGGAGTGATGTAA", 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"MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNPLLGAKVLPGETDIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDGAGRHFRLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRGELAAVYDRSNTQVRSFTYDDKYRGRMVAHRHTGRPEICYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLNRREVLHTQGEGGLKRVVKKEHADGSVTQSQFDAVGRLRAQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFYYNHHSQLTSATGPDGLEIRREYDEWGRLIQETAPDGDITRYRYDNPHSDLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQVTAVHREEGLSQYRAYDSRGQLIAVKDTQGHETRYEYNAAGDLTTVIAPDGSRNGTQYDAWGKAICTTQGGLTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVNGETAERWQYDERGWLTDISHISEGHRVTVHYGYDSKGRLASEHLTVHHPQTNELLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGWLSGMKLGDTPLVEYTRDRLHRETLRSFGRYELTTAYTPAGQLQSQHLNSLLSDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIPYTTDPAGNRLPDPELHPDSALSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADTLQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVAQMQSQMDPVYTPARKIHLYHCDHRGLPLALISTEGTTAWYAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPISNIDPLGLETLKCIKPLHSMGGTGERSGPDIWGNPFYHQYLCVPDGKGDYTCGGQDQRGESKGDGLWGPGKASNDTKEAAGRCDLVETDNSCVENCLKGKFKEVRPRYSVLPDIFTPINLGLFKNCQDWSNDSLETCKMKCSGNNIGRFIRFVFTGVM", - "protein_translation_length": 1397, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0691" - ], - [ - "gene_synonym", - "GeneID:947566" - ], - [ - "gene_synonym", - "NP_415230.1" - ], - [ - "gene_synonym", - "GI:16128677" - ], - [ - "gene_synonym", - "ASAP:ABE-0002398" - ], - [ - "gene_synonym", - "ybfB" - ], - [ - "gene_synonym", - "EcoGene:EG11522" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAU5" - ], - [ - "gene_synonym", - "ECK0690" - ], - [ - "gene_synonym", - "b0702" - ] - ], - "dna_sequence": "ATGAAATATATTATTTTTTTATTCAGAGCTATATGGCTGGCTTTATCGCTTTTAATACTATTCTTTTCCATGCATAGACTTTCACTATTAGACTCCACTCGTGATGTGAGCGAGTTAATTAGTCTCATGTCTTATGGAATGATGGTAATATGTTTTCCAACAGGCATAGTATTCTTTATTGCTCTAATATTTATAGGGACTGTATCAGACATTATTGGCGTAAGGATTGATAGTAAGTATATTATGGCGATAATAATATGGCTTTATTTTCTGTCAGGAGGGTATATTCAATGGTTTGTATTAAGTAAGCGCATTATAAACAAATAA", - "dna_sequence_length": 327, - "functions": [ - "putative membrane protein" - ], - "id": "CDS_690", - "location": [ - [ - "NC_000913", - 733776, - "+", - 327 - ] - ], - "md5": "80f00631bb8a5dde6f3440049ad2df6b", - "parent_gene": "", - "protein_md5": "8f5384fdddf235412fa0e27f1a83636c", - "protein_translation": "MKYIIFLFRAIWLALSLLILFFSMHRLSLLDSTRDVSELISLMSYGMMVICFPTGIVFFIALIFIGTVSDIIGVRIDSKYIMAIIIWLYFLSGGYIQWFVLSKRIINK", - "protein_translation_length": 108, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0692" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77779" - ], - [ - "gene_synonym", - "ASAP:ABE-0002402" - ], - [ - "gene_synonym", - "rhsO" - ], - [ - "gene_synonym", - "EcoGene:EG13661" - ], - [ - "gene_synonym", - "ECK0691" - ], - [ - "gene_synonym", - "GeneID:946124" - ], - [ - "gene_synonym", - "b0703" - ], - [ - "gene_synonym", - "ybfO" - ] - ], - "dna_sequence": "AACCTGGGCATTGATATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACGGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGCACCCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGCCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGACGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGCCTGACCACGATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATACCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACGGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTTGTCAGCACGGAAGGGGCAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGAGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGCTGAATCCGGTTCAGTATATAGATTCAATGGGACTGGCATCAAAATATGGACACTTAAATAATGGCGGATATGGAGCGAGACCCAACAAACCGCCTACGCCCGATCCAAGTAAATTGCCGGACATAGCGAAACAATTAAGACTGCCATATCCTATTGACCAGGCCAGTAGTGCGCCTAATGTTTTCAAAACATTCTTCAGAGCATTAAGCCCTTACGACTACACACTGTATTGCAGGAAGTGGGTAAAACCAAATCTGACTTGTACGCCACAGGATGATTCCCAGTATCCAGGGATGGATACAAAGACAGCAAGTGATTACCTGCCACAGACAAATTGGCCAACAACTCAATTACCACCAGGATATACTTGTGCAGAACCCTATTTATTCCCAGACATTAATAAACCCGATGGGCCAGCAACAGCAGGGATAGATGATTTGGGTGAAATTTTAGCTAAGATGAAACAGAGAACATCGAGAGGAATAAGAAAATGA", 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"gene_synonym", - "ASAP:ABE-0002404" - ], - [ - "gene_synonym", - "GeneID:947288" - ], - [ - "gene_synonym", - "ybfC" - ], - [ - "gene_synonym", - "EcoGene:EG11523" - ], - [ - "gene_synonym", - "NP_415232.1" - ], - [ - "gene_synonym", - "ECK0692" - ], - [ - "gene_synonym", - "b0704" - ] - ], - "dna_sequence": "ATGAAAAGAGTTTTGTTCTTTTTGCTGATGATATTTGTTAGTTTTGGTGTTATAGCTGATTGCGAAATACAAGCTAAAGATCATGATTGTTTTACTATTTTCGCTAAGGGTACTATTTTTTCCGCGTTTCCTGTCTTAAATAATAAAGCCATGTGGAGATGGTATCAGAATGAGGACATCGGTGAGTATTATTGGCAAACAGAACTGGGTACATGTAAAAATAATAAATTCACACCAAGCGGGGCGAGACTCTTAATTCGCGTCGGGTCACTACGCCTTAATGAAAATCATGCCATCAAAGGAACGTTGCAGGAGTTGATAAATACAGCAGAAAAAACGGCGTTTCTCGGCGATCGGTTTAGAAGTTATATAAGAGCGGGTATCTATCAAAAAAAGAGCAGTGATCCAGTTCAGTTGTTGGCAGTCCTTGATAATTCAATCATGGTAAAATATTTTAAAGATGAGAAACCAACTTATGCTCGAATGACAGCACATCTCCCGAACAAAAATGAGTCTTACGAATGTTTAATAAAGATACAGCATGAACTAATTCGTAGTGAAGAGAAATAA", - "dna_sequence_length": 570, - "functions": [ - "putative secreted protein" - ], - "id": "CDS_692", - "location": 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"ATGGAACTTAAAAAATTGATGGAACATATTTCTATTACACCCGATTACAGACAAGCCTGGAAAGTGGTGCATAAATTGTCAGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTCGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGAGTTGTATCCCAG", - "dna_sequence_length": 240, - "id": "CDS_693", - "location": [ - [ - "NC_000913", - 736445, - "+", - 240 - ] - ], - "md5": "0c6b1261e7623e4b209eacc89da9b7b2", - "parent_gene": "", - "protein_md5": "fc82b083ae31bdd025e8382e1504079b", - "protein_translation": "MELKKLMEHISITPDYRQAWKVVHKLSDILLLTICAVISGAEGWEDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSQ", - "protein_translation_length": 80, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0695" - ], - [ - "gene_synonym", - "ASAP:ABE-0002407" - ], - [ - "gene_synonym", - "ECK0694" - ], - [ - "gene_synonym", - "EcoGene:EG13417" - ], - [ - "gene_synonym", - "GeneID:947075" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75741" - ], - [ - "gene_synonym", - "b0705" - ], - [ - "gene_synonym", - "ybfL" - ] - ], - "dna_sequence": "ATGGAACTTAAAAAATTGATGGAACATATTTCTATTATTCCCGATTACAGATAAGCCTGGAAAGTAGAGCATAAATTGTCAGGCATCCTACTATTGACTATTTTTGCCGTTATTTCTGGTGCAGAAAGTTGGGAAGATATAGAGGATTTCGGGGAAACACATCTCGATTTCTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACTATTGCCAGAGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGATTGCCATTCATCAAATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGGCAGATCAAGACGGATAAGAAATCCAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTTAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACAGTTACGCAATGAGTGAAAAGAGTCACGGCAGAGAAGAAATCCGTCTTCATATTGTTTGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGACTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCAATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCAGAAAAGTTCGCCACAGCAATCCGAAACCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAACGCCGCAGAATTATTTTCAGGGATACGGCACATCGCTATTAATATTTTAACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGATAGAAACTATCTCGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAA", 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"ATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAACATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACATCCCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGAGTTGTATCCTGTATCTGTCCTGCGAAATTTCATGAGAGCTTTATTAACTGGATGCTTGACTACCATTCTTCAGATGATAAAGACGTCATCGCAATTGATGGAAAAATACACCGGCATTCTTATGACAAGAGTCGCCGTAAGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATAAGAAATCCAATGAGATCACAGCTATCCCTGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCAAAACCGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGCTGTAAAAGGAAACCAGGGGCGGCTAAATAAAGCCTTCGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCCAAGCATGACAGTTACGCAATTAGTGAAAAGAGTCACGGCAGAGAAGAAACCCGTCTTCATATTGTTTGCGATGTCCCTGATGAGCTTATTGATTTCACGTTTGAATAG", - "dna_sequence_length": 762, - "functions": [ - "H repeat-associated putative transposase" - ], - "id": "CDS_695", - "location": [ - [ - "NC_000913", - 738092, - "+", - 762 - ] - ], - "md5": "da933548c2f0a7e658fefc49ff37f448", - "parent_gene": "", - "protein_md5": "dc5db9bfbf141178375c276cbb923c91", - "protein_translation": "MELKKLMEHISIIPDYRQAWKVEHKLSDILLLTICAVISGAEGWEDIEDFGETHPDFLKQYGDFENGIPVHDTIARVVSCICPAKFHESFINWMLDYHSSDDKDVIAIDGKIHRHSYDKSRRKGAIHVISAFSTMHSLVIGQIKTDKKSNEITAIPELLNMLDIKGKIIKTDAMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKAFEEKFPLKELNNPKHDSYAISEKSHGREETRLHIVCDVPDELIDFTFE", - "protein_translation_length": 253, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128682" - ], - [ - "gene_synonym", - "EcoGene:EG11108" - ], - [ - "gene_synonym", - "JW0697" - ], - [ - "gene_synonym", - "ybgA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24252" - ], - [ - "gene_synonym", - "GeneID:944853" - ], - [ - "gene_synonym", - "NP_415235.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002414" - ], - [ - "gene_synonym", - "tkp" - ], - [ - "gene_synonym", - "b0707" - ], - [ - "gene_synonym", - "ECK0696" - ] - ], - "dna_sequence": "ATGAATCTACAACGATTTGATGACAGCACCCTAATCCGTATCTTTGCCCTTCATGAGTTACATCGACTGAAAGAACATGGCTTAACGCGCGGGGCGCTTCTCGATTATCACAGCCGCTATAAACTCGTCTTTCTGGCGCATTCTCAGCCGGAGTACCGCAAACTTGGCCCGTTCGTGGCTGATATTCACCAGTGGCAAAATCTGGATGACTATTACAACCAGTACCGCCAACGCGTAGTTGTTTTGCTTTCTCACCCCGCCAACCCGCGCGATCACACCAATGTTTTGATGCACGTTCAGGGTTATTTTCGCCCGCATATTGATTCCACAGAACGCCAGCAGCTGGCTGCGCTTATCGACAGTTATCGCCGTGGCGAGCAACCACTTCTTGCGCCGCTGATGCGTATCAAACACTATATGGCGCTTTATCCTGACGCCTGGCTTTCAGGGCAGCGTTATTTCGAACTTTGGCCGCGTGTGATTAACTTGCGCCATTCAGGAGTTTTATGA", - "dna_sequence_length": 510, - "functions": [ - "DUF1722 family protein" - ], - "id": "CDS_696", - "location": [ - [ - "NC_000913", - 739001, - "+", - 510 - ] - ], - "md5": "5b1f6c32fc02a2d31f9149770ae7cc46", - "parent_gene": "", - "protein_md5": "b65c20eb9d1634ad2d5c0cc0620c171e", - "protein_translation": "MNLQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVADIHQWQNLDDYYNQYRQRVVVLLSHPANPRDHTNVLMHVQGYFRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRVINLRHSGVL", - "protein_translation_length": 169, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128683" - ], - [ - "gene_synonym", - "NP_415236.1" - ], - [ - "gene_synonym", - "phrB" - ], - [ - "gene_synonym", - "JW0698" - ], - [ - "gene_synonym", - "GeneID:947005" - ], - [ - "gene_synonym", - "b0708" - ], - [ - "gene_synonym", - "EcoGene:EG10736" - ], - [ - "gene_synonym", - "ASAP:ABE-0002417" - ], - [ - "gene_synonym", - "phr" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00914" - ], - [ - "gene_synonym", - "ECK0697" - ] - ], - "dna_sequence": "ATGACTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCACGATAATCTCGCACTGGCTGCCGCCTGCCGCAATTCGTCTGCACGCGTGCTGGCGTTGTATATCGCTACACCACGCCAGTGGGCGACGCATAACATGTCGCCGCGTCAGGCTGAACTTATCAATGCTCAACTGAATGGGCTACAAATAGCGCTTGCGGAAAAAGGTATTCCTTTATTGTTCCGTGAAGTGGATGACTTTGTCGCCAGTGTCGAAATAGTTAAACAGGTGTGCGCGGAAAACAGCGTTACCCACCTGTTTTATAACTATCAGTATGAAGTGAATGAGCGGGCGCGGGATGTGGAAGTTGAAAGAGCGCTGCGTAACGTGGTGTGTGAAGGATTTGATGACAGCGTGATCCTGCCGCCTGGCGCGGTGATGACCGGTAATCACGAGATGTACAAAGTCTTTACGCCTTTTAAGAATGCCTGGCTGAAACGGCTGCGGGAAGGGATGCCGGAGTGCGTCGCTGCGCCAAAAGTTCGTAGTAGCGGATCGATAGAGCCCTCGCCATCCATTACGCTGAATTATCCTCGTCAGTCTTTCGATACTGCGCATTTTCCGGTGGAAGAAAAAGCGGCGATTGCGCAATTACGCCAGTTTTGCCAGAACGGTGCCGGAGAATATGAGCAACAACGAGATTTTCCGGCAGTGGAAGGCACCAGCCGTTTGTCGGCCAGCCTGGCAACGGGCGGGTTATCGCCTCGCCAGTGCTTGCATCGCTTGTTGGCTGAACAGCCGCAGGCGCTGGACGGTGGGGCCGGTAGTGTCTGGCTTAATGAGCTGATCTGGCGCGAGTTTTACCGTCACCTGATAACGTATCACCCCTCGTTGTGTAAACATCGTCCATTTATTGCCTGGACGGATCGTGTACAGTGGCAGAGCAATCCCGCACATTTACAGGCCTGGCAGGAAGGCAAAACGGGATACCCGATTGTTGATGCCGCTATGCGTCAGCTTAACAGCACTGGCTGGATGCATAACAGGCTACGGATGATTACAGCCAGTTTTCTGGTGAAAGATTTATTGATCGACTGGCGCGAAGGCGAGCGATATTTCATGTCGCAGCTGATTGATGGTGATTTGGCAGCCAATAACGGTGGCTGGCAGTGGGCCGCTTCAACCGGAACCGATGCAGCGCCGTATTTTCGTATTTTCAACCCGACAACCCAGGGCGAGAAATTTGATCATGAGGGCGAGTTTATCCGCCAGTGGCTACCGGAACTGCGCGATGTGCCAGGGAAAGTGGTGCATGAGCCGTGGAAGTGGGCGCAGAAAGCAGGTGTGACGCTGGATTATCCGCAACCGATAGTCGAGCACAAAGAAGCGAGAGTACAAACGTTGGCAGCGTATGAGGCGGCGCGGAAGGGGAAATAA", 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"ECK0698" - ], - [ - "gene_synonym", - "dtpD" - ], - [ - "gene_synonym", - "JW0699" - ], - [ - "gene_synonym", - "b0709" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75742" - ], - [ - "gene_synonym", - "ASAP:ABE-0002420" - ], - [ - "gene_synonym", - "ybgH" - ], - [ - "gene_synonym", - "GI:16128684" - ], - [ - "gene_synonym", - "GeneID:947368" - ] - ], - "dna_sequence": "ATGAATAAACACGCATCACAGCCGCGCGCTATTTACTATGTCGTTGCGCTGCAAATCTGGGAATATTTTAGCTTTTACGGCATGCGTGCCCTGCTGATTCTCTATCTCACCAATCAACTAAAATACAACGATACTCACGCCTACGAGTTATTTAGCGCCTACTGTTCGCTGGTGTATGTCACGCCAATCCTCGGTGGCTTTTTGGCGGATAAAGTTCTCGGCAATCGCATGGCGGTGATGCTGGGGGCGTTGTTGATGGCGATCGGTCATGTGGTGCTGGGTGCCAGTGAGATCCATCCGTCATTCCTCTATCTGTCCCTGGCGATTATCGTCTGCGGCTATGGCCTGTTTAAATCTAACGTAAGCTGTCTGCTCGGCGAGCTGTATGAGCCAACCGATCCGCGTCGTGATGGCGGTTTCTCGCTGATGTATGCGGCGGGTAACGTGGGGTCTATTATCGCACCTATCGCCTGTGGTTACGCCCAGGAAGAGTACAGCTGGGCGATGGGCTTTGGCCTGGCGGCGGTTGGCATGATCGCGGGTCTGGTCATTTTCTTATGTGGCAATCGTCATTTCACTCATACCCGCGGCGTTAACAAAAAAGTACTGCGTGCGACAAACTTTCTCCTGCCGAACTGGGGATGGCTGCTGGTTCTGCTGGTGGCAACGCCTGCACTGATTACCATACTGTTCTGGAAAGAGTGGTCGGTATACGCCTTAATTGTCGCGACTATTATTGGCCTGGGTGTACTGGCAAAAATTTATCGCAAAGCAGAAAACCAGAAACAGCGGAAGGAGCTGGGGCTGATTGTGACGCTCACCTTCTTCAGTATGTTGTTCTGGGCCTTCGCACAACAGGGCGGTAGCTCGATTAGCCTTTATATCGACCGCTTCGTTAACCGCGATATGTTTGGTTATACCGTTCCGACCGCGATGTTCCAGTCGATTAATGCCTTCGCAGTTATGCTGTGCGGTGTGTTCCTGGCGTGGGTGGTAAAAGAGAGTGTCGCGGGTAATCGTACCGTGCGCATCTGGGGGAAATTTGCTCTTGGCCTTGGCCTGATGAGCGCCGGATTCTGCATTCTGACCTTAAGCGCCCGCTGGTCCGCAATGTATGGTCACTCTTCTCTGCCACTGATGGTATTAGGCCTGGCGGTGATGGGCTTTGCGGAACTGTTTATCGACCCGGTTGCCATGTCGCAAATTACGCGCATTGAAATCCCCGGTGTGACCGGCGTATTAACCGGCATCTACATGCTGCTTTCTGGCGCGATCGCGAACTATCTGGCGGGCGTGATTGCCGATCAGACATCGCAGGCTTCGTTTGATGCTTCCGGGGCGATCAACTACTCCATCAATGCATATATTGAAGTATTTGATCAAATTACCTGGGGCGCACTGGCGTGTGTAGGACTGGTACTGATGATTTGGCTGTATCAGGCGCTGAAATTCAGAAACCGCGCGCTGGCGCTGGAGTCTTAA", 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- "EcoGene:EG13305" - ], - [ - "gene_synonym", - "GeneID:945824" - ], - [ - "gene_synonym", - "GI:16128685" - ], - [ - "gene_synonym", - "ASAP:ABE-0002424" - ], - [ - "gene_synonym", - "ECK0699" - ], - [ - "gene_synonym", - "ybgI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFP6" - ], - [ - "gene_synonym", - "b0710" - ] - ], - "dna_sequence": "ATGAAAAACACCGAACTGGAACAACTGATTAACGAAAAACTGAACAGCGCGGCGATTAGTGATTACGCGCCGAATGGTTTGCAGGTGGAAGGCAAAGAGACGGTGCAAAAAATTGTTACCGGTGTCACCGCCAGCCAGGCTTTGCTCGATGAGGCAGTGCGTCTGGGCGCGGATGCGGTCATTGTGCATCATGGCTACTTCTGGAAAGGAGAGTCTCCGGTCATTCGCGGAATGAAGCGTAACCGTTTAAAAACGTTGCTGGCGAATGATATCAACCTGTATGGCTGGCATTTGCCGCTTGACGCACATCCTGAGCTGGGCAATAACGCACAGCTGGCGGCGTTACTGGGGATCACGGTCATGGGCGAAATTGAGCCGTTGGTGCCGTGGGGCGAACTGACCATGCCTGTGCCGGGACTGGAGCTGGCTTCCTGGATTGAAGCGCGTCTGGGACGTAAGCCGTTATGGTGTGGCGATACCGGACCTGAGGTGGTCCAGCGCGTCGCCTGGTGCACGGGCGGCGGGCAAAGTTTTATCGATAGCGCCGCGCGTTTTGGCGTGGATGCTTTTATTACTGGCGAAGTTTCTGAACAGACCATTCATTCAGCCCGCGAGCAGGGATTGCATTTTTATGCTGCAGGTCACCATGCCACTGAACGTGGTGGTATTCGCGCATTGAGCGAGTGGCTGAATGAAAATACCGATCTTGATGTGACCTTTATTGATATTCCTAATCCTGCATAA", - "dna_sequence_length": 744, - "functions": [ - "NIF3 family metal-binding protein" - ], - "id": "CDS_699", - "location": [ - [ - "NC_000913", - 742827, - "+", - 744 - ] - ], - "md5": "e497534b94c87d0e840658df8fdb79f1", - "parent_gene": "", - "protein_md5": "1f8e5f6ccb931658a7d0407519b276a7", - "protein_translation": "MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA", - "protein_translation_length": 247, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13306" - ], - [ - "gene_synonym", - "JW0701" - ], - [ - "gene_synonym", - "GeneID:945311" - ], - [ - "gene_synonym", - "GI:16128686" - ], - [ - "gene_synonym", - "ECK0700" - ], - [ - "gene_synonym", - "NP_415239.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002426" - ], - [ - "gene_synonym", - "ybgJ" - ], - [ - "gene_synonym", - "b0711" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAV4" - ] - ], - "dna_sequence": "GTGCAACGAGCGCGTTGTTATCTGATAGGTGAAACGGCGGTAGTGCTGGAACTGGAACCGCCGGTGACGCTGGCTAGCCAGAAACGGATCTGGCGACTGGCGCAGCGTCTGGTGGATATGCCGAATGTGGTTGAAGCCATTCCCGGCATGAACAATATCACGGTGATTTTGCGTAATCCTGAGTCGCTGGCGCTGGATGCCATAGAGCGTTTGCAACGCTGGTGGGAGGAGAGCGAGGCGCTGGAGCCGGAGTCTCGCTTTATTGAAATTCCGGTGGTTTACGGTGGTGCAGGCGGACCGGATTTGGCGGTGGTCGCGGCGCATTGCGGGTTGAGCGAAAAACAGGTTGTTGAATTGCACTCCTCCGTGGAATACGTGGTCTGGTTTTTAGGTTTTCAACCGGGCTTCCCGTATCTCGGGAGTTTGCCGGAACAACTACACACGCCACGGCGCGCTGAACCGCGCTTACTCGTTCCGGCAGGTTCTGTCGGGATCGGCGGGCCGCAGACTGGTGTTTATCCGCTGGCAACGCCGGGTGGCTGGCAGTTGATTGGTCATACCTCACTCAGCCTGTTTGATCCGGCGCGTGACGAACCCATCTTATTACGTCCGGGAGACAGCGTGCGCTTTGTACCGCAGAAGGAGGGAGTATGCTGA", - "dna_sequence_length": 657, - "functions": [ - "putative allophanate hydrolase, subunit 1" - ], - "id": "CDS_700", - "location": [ - [ - "NC_000913", - 743593, - "+", - 657 - ] - ], - "md5": "041cf887464f321fcf9e47bd695bc986", - "parent_gene": "", - "protein_md5": "580e1ef1946abc3711a8ef7691ba69ee", - "protein_translation": "MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVVEAIPGMNNITVILRNPESLALDAIERLQRWWEESEALEPESRFIEIPVVYGGAGGPDLAVVAAHCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPAGSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC", - "protein_translation_length": 218, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002428" - ], - [ - "gene_synonym", - "NP_415240.1" - ], - [ - "gene_synonym", - "JW0702" - ], - [ - "gene_synonym", - "GI:16128687" - ], - [ - "gene_synonym", - "ECK0701" - ], - [ - "gene_synonym", - "EcoGene:EG13307" - ], - [ - "gene_synonym", - "GeneID:945317" - ], - [ - "gene_synonym", - "ybgK" - ], - [ - "gene_synonym", - "b0712" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75745" - ] - ], - "dna_sequence": "ATGCTGAAGATTATTCGTGCGGGCATGTATACCACTGTGCAGGATGGCGGTCGTCACGGTTTTCGCCAGTCGGGTATCAGCCACTGCGGCGCACTGGATATGCCCGCGTTACGCATTGCTAACCTACTGGTGGGTAATGACGCCAATGCCCCCGCGCTGGAGATCACGCTCGGTCAGTTAACTGTTGAGTTCGAAACTGATGGGTGGTTTGCTCTGACGGGTGCCGGTTGCGAAGCGCGGCTGGATGATAATGCCGTCTGGACCGGCTGGCGATTGCCGATGAAAGCAGGCCAGCGTTTAACGCTTAAACGCCCGCAGCACGGGATGCGCAGTTATCTGGCGGTCGCGGGTGGTATTGATGTTCCGCCGGTAATGGGCTCATGCAGCACCGATCTCAAAGTGGGGATTGGCGGGCTGGAAGGCCGTTTACTGAAGGATGGTGACCGACTCCCGATTGGCAAATCGAAGCGTGATTCTATGGAAGCGCAGGGCGTTAAACAGCTGCTGTGGGGCAACCGCATTCGCGCCTTGCCGGGGCCGGAATATCATGAGTTCGATCGCGCCTCGCAGGATGCATTCTGGCGTTCGCCCTGGCAGCTTAGCTCGCAAAGTAACCGCATGGGCTATCGCTTACAGGGGCAAATTTTAAAACGCACCACCGATCGCGAACTGTTATCTCACGGTTTGTTACCGGGCGTGGTGCAGGTGCCACATAACGGGCAGCCGATTGTGTTGATGAACGACGCACAGACCACCGGTGGTTACCCGCGTATTGCCTGTATCATTGAGGCTGATATGTACCATCTGGCGCAAATTCCGCTCGGTCAGCCGATTCATTTTGTCCAGTGTTCACTGGAAGAGGCACTAAAAGCACGGCAAGATCAGCAACGTTATTTTGAACAATTAGCGTGGCGGCTGCACAATGAAAATTGA", - "dna_sequence_length": 933, - "functions": [ - "putative 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"+", - 735 - ] - ], - "md5": "de8b4f312f8d882f36dd23d7e3801cb8", - "parent_gene": "", - "protein_md5": "1f63a13deed1d14ee47d782b2455d089", - "protein_translation": "MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQIMQACVREAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRHVKPHGMLYNQAAKEAQLADAIARAVYACDPALILVGLAGSELIRAGKQYGLTTREEVFADRGYQADGSLVPRSQSGALIENEEQALAQTLEMVQHGRVKSITGEWATVAAQTVCLHGDGEHALAFARRLRSAFAEKGIVVAA", - "protein_translation_length": 244, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13237" - ], - [ - "gene_synonym", - "JW0704" - ], - [ - "gene_synonym", - "GeneID:945320" - ], - [ - "gene_synonym", - "nei" - ], - [ - "gene_synonym", - "ASAP:ABE-0002433" - ], - [ - "gene_synonym", - "GI:16128689" - ], - [ - "gene_synonym", - "NP_415242.1" - ], - [ - "gene_synonym", - "ECK0703" - ], - [ - "gene_synonym", - "b0714" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P50465" - ] - ], - "dna_sequence": "ATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAGGCGGCGATCAAAGGCAAACCACTAACTGATGTCTGGTTTGCCTTCCCGCAGTTAAAACCTTATCAATCACAACTTATCGGTCAACACGTTACCCATGTGGAAACGCGTGGTAAGGCGTTGTTAACTCATTTTTCCAACGACTTAACGCTCTACAGCCATAATCAGCTTTACGGCGTCTGGCGCGTGGTTGATACCGGCGAAGAGCCGCAGACCACGCGAGTATTGCGGGTAAAACTGCAAACGGCTGACAAAACCATTCTGCTTTATAGCGCCTCGGATATTGAGATGTTGACCCCGGAACAACTGACCACGCATCCGTTTTTACAACGCGTTGGTCCCGATGTGCTGGATCCGAATCTGACGCCGGAGGTGGTGAAAGAACGATTATTGTCGCCGCGCTTTCGTAACCGTCAGTTTGCTGGATTACTGCTCGATCAGGCGTTTCTGGCTGGGCTTGGCAATTATTTGCGGGTGGAGATCCTCTGGCAGGTTGGGTTGACTGGAAATCATAAAGCGAAAGATCTCAATGCGGCGCAACTGGATGCACTCGCACACGCGTTACTGGAGATTCCTCGATTTTCCTACGCTACGCGGGGGCAGGTGGATGAGAATAAGCATCATGGGGCGCTGTTTCGCTTTAAGGTTTTTCATCGAGATGGCGAACCGTGCGAACGTTGTGGCAGCATCATTGAGAAAACCACGCTGTCATCTCGCCCGTTTTACTGGTGCCCTGGCTGCCAGCACTAG", - "dna_sequence_length": 792, - "functions": [ - "endonuclease VIII and 5-formyluracil/5-hydroxymethyluracil DNA glycosylase" - ], - "id": "CDS_703", - "location": [ - [ - "NC_000913", - 745935, - "+", - 792 - ] - ], - "md5": "0dc085370e7aa4177783b741f64c5c41", - "parent_gene": "", - "protein_md5": "8d4f5fd2e953748336a91be9d21b88fb", - "protein_translation": "MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKPYQSQLIGQHVTHVETRGKALLTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTILLYSASDIEMLTPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDENKHHGALFRFKVFHRDGEPCERCGSIIEKTTLSSRPFYWCPGCQH", - "protein_translation_length": 263, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111163" - ], - [ - "gene_synonym", - "ECK0704" - ], - [ - "gene_synonym", - "GeneID:945321" - ], - [ - "gene_synonym", - "EcoGene:EG13310" - ], - [ - "gene_synonym", - "ASAP:ABE-0002435" - ], - [ - "gene_synonym", - "NP_415243.4" - ], - [ - "gene_synonym", - "JW5097" - ], - [ - "gene_synonym", - "abrB" - ], - [ - "gene_synonym", - "b0715" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75747" - ], - [ - "gene_synonym", - "ybgN" - ] - ], - "dna_sequence": "ATGCCAGTTTTGCAGTGGGGAATGTTATGTGTGCTATCACTTCTCCTTTCTATTGGTTTCCTCGCGGTACATCTCCCGGCGGCGCTATTACTTGGGCCGATGATCGCCGGGATCATCTTTAGTATGCGCGGAATTACTCTGCAACTTCCCCGCTCTGCTTTTCTCGCCGCCCAGGCCATTCTTGGCTGCATGATTGCGCAAAACCTCACTGGTTCGATTCTCACCACCCTGGCCGTCAACTGGCCGATCGTGCTTGCAATTTTACTGGTAACGCTGCTTTCCAGCGCCATTGTGGGTTGGTTATTGGTGCGCTATAGCTCATTGCCTGGAAATACCGGTGCCTGGGGCTCCTCTCCTGGCGGCGCGGCGGCAATGGTCGCTATGGCGCAAGATTACGGCGCAGATATTCGCCTGGTGGCGTTTATGCAATATCTGCGAGTGCTGTTCGTCGCGGGGGCCGCTGTTCTGGTCACCCGCATGATGCTGGGCGATAACGCTGAAGCGGTTAACCAGCATATCGTCTGGTTCCCGCCAGTGAGCATTAATCTCCTGCTTACTATTTTGCTCGCGGTCGTTGCCGGTACAGTGGGATGCCTGCTGCGTCTTCCTTCCGGCACGATGCTCATCCCGATGCTGGCGGGCGCAGTGCTCCAGTCTGGTCAGCTCATCACCATCGAACTACCGGAATGGCTGCTGGCGATGGCGTATATGGCAATTGGCTGGCGGATTGGTCTTGGTTTCGATAAACAAATCTTACTGCGGGCACTACGCCCGCTACCGCAAATCCTGCTGTCGATTTTTGCTCTGCTGGCTATTTGTGCGGGTATGGCGTGGGGGCTGACCCGGTTTATGCACATTGATTTTATGACTGCCTACCTCGCCACCAGCCCCGGCGGGCTTGATACCGTGGCGGTCATCGCCGCAGGGAGCAATGCCGATATGGCGCTCATTATGGCGATGCAAACCCTACGCCTGTTCAGTATTTTGCTGACAGGGCCTGCCATTGCGCGGTTTATTTCAACCTATGCGCCGAAGCGGTCGGCCTAG", - "dna_sequence_length": 1047, - "functions": [ - "regulator of aidB expression", - "inner membrane protein" - ], - "id": "CDS_704", - "location": [ - [ - "NC_000913", - 747769, - "-", - 1047 - ] - ], - "md5": "15796b745a47e8d419747eb7925199d8", - "parent_gene": "", - "protein_md5": "62c6455739d07815e05913c263be8b60", - "protein_translation": "MPVLQWGMLCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLLLTILLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIAAGSNADMALIMAMQTLRLFSILLTGPAIARFISTYAPKRSA", - "protein_translation_length": 348, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415244.4" - ], - [ - "gene_synonym", - "ECK0705" - ], - [ - "gene_synonym", - "ASAP:ABE-0002441" - ], - [ - "gene_synonym", - "EcoGene:EG13311" - ], - [ - "gene_synonym", - "GeneID:947550" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75748" - ], - [ - "gene_synonym", - "GI:90111164" - ], - [ - "gene_synonym", - "b0716" - ], - [ - "gene_synonym", - "JW5098" - ], - [ - "gene_synonym", - "ybgO" - ] - ], - "dna_sequence": "ATGAGTGCTGGCAAGGGATTGTTGCTCGTCATCTGCCTGTTATTTCTGCCGTTGAAGTCTGCAATGGCGCTGAACTGCTATTTTGGTACATCTGGTGGCGCAGTAGAAAAATCAGAAGCGATTCAACCGTTTGCTGTACCAGGCAATGCCAAACCCGGTGATAAGATCTGGGAATCTGACGATATTAAAATTCCCGTCTATTGTGACAACAATACCAACGGCAACTTTGAAAGCGAGCATGTCTACGCCTGGGTAAACCCCTATCCGGGGGTGCAGGATCGTTATTATCAACTCGGCGTGACATACAACGGTGTCGATTACGATGCCAGTCTGGGAAAAAGTCGCATCGACACTAACCAGTGTATCGACAGTAAGAACATTGATATTTATACCCCTGAGCAGATCATCGCGATGGGATGGCAGAACAAAATTTGCTCGGGCGATCCCGCTAATATTCATATGTCGCGTACCTTTCTCGCTCGCATGCGGTTATACGTCAAAATACGAGAAATGCCGCCGCATGATTATCAAAGTACGCTTAGCGACTATATCGTCGTGCAATTTGACGGTGCCGGTAGCGTTAACGAAGACCCTACTGCCCAAAACCTGAAATATCATATTACTGGTCTGGAAAACATTCGCGTGCTGGATTGCAGCGTCAATTTTTCCATTTCACCGGAAACACAGGTGATTGATTTTGGTAAATTTAATTTGCTGGATATACGTCGCCACACAATGTCGAAAACGTTCAGTATTAAAACGACCAAGAGCCAAAACGATCAATGCACCGACGGATTTAAAGTCAGTTCCTCCTTTTATACCGAAGAAACGTTGGTTGAAGAAGATAAAGCATTGTTGATTGGTAATGGTCTGAAGCTACGTTTACTGGATGAAAACGCCTCGCCTTATACCTTCAATAAATATGCTGAATACGCCGATTTCACCAGTGACATGTTGGTCTACGAAAAAACCTATACGGCTGAACTTTCGTCCATTCCAGGCACCCCCATCGAGGCTGGCCCCTTCGATACAGTGGTGCTTTTTAAGATTAACTATAACTGA", 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- "gene_synonym", - "NP_415245.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75749" - ], - [ - "gene_synonym", - "b0717" - ], - [ - "gene_synonym", - "ASAP:ABE-0002443" - ] - ], - "dna_sequence": "ATGACATTTATTAAAGGATTACCCTTAATGTTGTTAACCATCAGCTTGGGTTGCAATGCTGCGGTGCAACCCGATCGCACACGCATTGTGTTTAACGCCAATGACAAAGCCACCAGCCTGCGTATCGAAAACCAAAGTGACAAACTGCCTTATCTTGCTTATTCCTGGATAGAAAATGAAAAAGGGGAGAAAAGCGATGCTCTTCTGGTCGCTTTGCCCCCTATTCAACGTCTGGAACCGAAAGCGACATCGCAGGTGCGGGTTGTGAAACAAGCCTCAACCACACAATTACCTGGCGATCGCGAAACGCTATTTTTCTACAATATGCGCGAAATTCCTCCCGCTCCGGATAAAAGCAGCGACCATGCGATACTTCAGGTCGCTATTCAAAGTCGTATTAAATTGTTCTGGCGACCGGCTGCATTACGCAAGAAAGCAGGAGAAAAGGTCGAACTGCAGTTACAGGTCAGCCAGCAGGGCAACCAACTGACACTGAAAAATCCTACCGCGTATTATCTGACCATTGCCTATCTGGGGAGAAATGAAAAAGGCGTTCTCCCAGGCTTCAAAACCGTGATGGTTGCACCTTTTAGTACGGTCAACACAAACACCGGAAGTTATAGCGGCAGCCAGTTTTATCTCGGTTACATGGATGATTACGGCGCATTACGCATGACGACGCTCAACTGCAGCGGACAATGCCGTTTACAAGCAGTGGAGGCGAAATGA", - "dna_sequence_length": 729, - "functions": [ - "putative periplasmic pilin chaperone" - ], - "id": "CDS_706", - "location": [ - [ - "NC_000913", - 749707, - "-", - 729 - ] - ], - "md5": "7f608668f962fb7d3ab0ca2fef572047", - "parent_gene": "", - "protein_md5": "225ab6496bd63862595a1bb554914683", - "protein_translation": "MTFIKGLPLMLLTISLGCNAAVQPDRTRIVFNANDKATSLRIENQSDKLPYLAYSWIENEKGEKSDALLVALPPIQRLEPKATSQVRVVKQASTTQLPGDRETLFFYNMREIPPAPDKSSDHAILQVAIQSRIKLFWRPAALRKKAGEKVELQLQVSQQGNQLTLKNPTAYYLTIAYLGRNEKGVLPGFKTVMVAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTTLNCSGQCRLQAVEAK", - "protein_translation_length": 242, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0707" - ], - [ - "gene_synonym", - "ybgQ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75750" - ], - [ - "gene_synonym", - "EcoGene:EG13313" - ], - [ - "gene_synonym", - "NP_415246.2" - ], - [ - "gene_synonym", - "GI:90111165" - ], - [ - "gene_synonym", - "b0718" - ], - [ - "gene_synonym", - "JW5099" - ], - [ - "gene_synonym", - "ASAP:ABE-0002446" - ], - [ - "gene_synonym", - "GeneID:946537" - ] - ], - "dna_sequence": "GTGAATATTTATCGACTCTCTTTTGTATCCTGCCTGGTCATGGCGATGCCTTGCGCAATGGCGGTCGAATTCAATCTGAATGTTCTCGATAAATCAATGCGCGACCGCATTGATATTTCATTATTAAAGGAAAAAGGAGTCATTGCTCCCGGTGAATATTTTGTTAGCGTTGCGGTGAATAACAACAAAATCAGTAATGGGCAAAAAATTAACTGGCAAAAAAAGGGTGACAAAACCATTCCATGCATCAATGATTCACTGGTCGATAAATTTGGTTTAAAACCAGATATCCGTCAGTCCTTGCCACAGATAGATCGGTGTATTGATTTCAGTTCCCGACCTGAAATGCTCTTCAATTTCGATCAAGCCAATCAGCAACTGAATATTAGTATTCCGCAAGCCTGGCTGGCGTGGCACTCAGAAAACTGGGCTCCCCCCTCTACATGGAAAGAAGGTGTTGCCGGTGTCCTGATGGATTACAACTTGTTTGCCAGCAGCTACCGCCCACAGGACGGCAGCAGCAGCACTAACCTGAATGCCTACGGTACCGCCGGAATTAACGCCGGGGCATGGCGCTTACGCAGTGATTACCAGCTTAATAAGACCGATAGCGAAGATAACCATGACCAGTCAGGCGGAATATCGCGCACCTATCTTTTTCGTCCATTACCGCAATTAGGCTCTAAGTTAACCCTCGGCGAAACCGATTTCAGTTCCAATATTTTCGATGGTTTTTCTTATACCGGCGCGGCACTGGCGAGTGACGATCGAATGTTACCGTGGGAGCTGCGTGGCTACGCCCCACAAATTAGCGGTATTGCACAGACCAATGCCACGGTGACGATCAGTCAATCAGGCCGCGTCATTTACCAGAAAAAAGTCCCGCCAGGCCCGTTTATTATTGATGACCTCAATCAGTCTGTTCAGGGCACGCTGGATGTCAAAGTGACGGAAGAAGATGGTCGGGTGAACAATTTCCAGGTTTCGGCAGCATCGACGCCCTTCCTGACTCGCCAGGGACAGGTTCGCTATAAATTGGCCGCGGGTCAGCCACGGCCTTCCATGTCACATCAAACTGAAAATGAAACCTTTTTTAGCAATGAAGTTTCCTGGGGGATGCTCTCAAACACCTCGCTGTACGGCGGCCTGCTGATTTCTGATGATGACTACCATTCTGCCGCAATGGGTATCGGGCAAAATATGCTGTGGCTTGGCGCACTGTCCTTTGATGTCACCTGGGCCAGTAGCCATTTTGATACTCAGCAGGACGAGCGGGGCTTAAGCTACCGTTTTAATTACAGCAAACAAGTGGATGCCACCAACAGCACGATTTCGCTCGCCGCTTATCGCTTCTCAGATCGTCATTTTCACAGCTACGCCAACTATCTGGATCACAAATACAACGACAGCGATGCGCAGGACGAAAAACAGACGATCAGCTTATCCGTGGGCCAACCGATTACCCCACTAAACCTCAATCTTTACGCCAACCTGCTACATCAAACCTGGTGGAATGCAGACGCCTCCACGACCGCCAACATCACAGCAGGTTTTAATGTTGATATTGGTGACTGGAGAGATATCTCGATTTCGACGTCATTCAATACGACCCACTACGAAGATAAAGATCGCGACAACCAGATTTATCTGTCGATTTCGCTCCCCTTCGGTAACGGTGGTCGGGTTGGCTATGACATGCAAAACAGTAGCCACAGCACCATACACCGCATGTCGTGGAACGATACGCTGGATGAACGTAATAGCTGGGGCATGTCTGCCGGACTGCAATCCGATCGTCCGGACAATGGAGCCCAGGTGAGCGGTAACTATCAGCACCTGAGTTCAGCGGGTGAGTGGGATATTTCTGGTACCTATGCCGCCAGTGATTACAGTTCCGTCAGCAGCAGCTGGAGCGGTTCTTTCACCGCAACCCAATATGGTGCAGCATTTCATCGCCGCAGCTCCACCAATGAACCACGCCTGATGGTCAGCACCGATGGCGTGGCAGATATTCCGGTTCAGGGCAATCTCGACTACACCAACCATTTTGGCATTGCGGTGGTGCCGTTGATTTCCAGTTACCAGCCTTCCACCGTGGCGGTGAACATGAATGACTTACCCGACGGCGTAACAGTTGCAGAAAACGTCATCAAGGAAACATGGATTGAAGGCGCGATAGGTTACAAATCACTGGCTTCCCGTTCCGGTAAAGACGTTAACGTCATCATACGCAACGCCAGCGGTCAGTTCCCTCCCCTCGGTGCGGATATCCGCCAGGATGACAGCGGCATTAGCGTGGGTATGGTTGGCGAGGAAGGACATGCCTGGTTAAGCGGTGTCGCTGAAAATCAACTGTTTACCGTGGTCTGGGGTGAGCAAAGCTGCATTATTCATCTGCCAGAACGTCTGGAAGACACGACCAAACGCCTGATTTTACCTTGTCATTAA", 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"MNIYRLSFVSCLVMAMPCAMAVEFNLNVLDKSMRDRIDISLLKEKGVIAPGEYFVSVAVNNNKISNGQKINWQKKGDKTIPCINDSLVDKFGLKPDIRQSLPQIDRCIDFSSRPEMLFNFDQANQQLNISIPQAWLAWHSENWAPPSTWKEGVAGVLMDYNLFASSYRPQDGSSSTNLNAYGTAGINAGAWRLRSDYQLNKTDSEDNHDQSGGISRTYLFRPLPQLGSKLTLGETDFSSNIFDGFSYTGAALASDDRMLPWELRGYAPQISGIAQTNATVTISQSGRVIYQKKVPPGPFIIDDLNQSVQGTLDVKVTEEDGRVNNFQVSAASTPFLTRQGQVRYKLAAGQPRPSMSHQTENETFFSNEVSWGMLSNTSLYGGLLISDDDYHSAAMGIGQNMLWLGALSFDVTWASSHFDTQQDERGLSYRFNYSKQVDATNSTISLAAYRFSDRHFHSYANYLDHKYNDSDAQDEKQTISLSVGQPITPLNLNLYANLLHQTWWNADASTTANITAGFNVDIGDWRDISISTSFNTTHYEDKDRDNQIYLSISLPFGNGGRVGYDMQNSSHSTIHRMSWNDTLDERNSWGMSAGLQSDRPDNGAQVSGNYQHLSSAGEWDISGTYAASDYSSVSSSWSGSFTATQYGAAFHRRSSTNEPRLMVSTDGVADIPVQGNLDYTNHFGIAVVPLISSYQPSTVAVNMNDLPDGVTVAENVIKETWIEGAIGYKSLASRSGKDVNVIIRNASGQFPPLGADIRQDDSGISVGMVGEEGHAWLSGVAENQLFTVVWGEQSCIIHLPERLEDTTKRLILPCH", - "protein_translation_length": 815, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12359" - ], - [ - "gene_synonym", - "GI:16128694" - ], - [ - "gene_synonym", - "JW0709" - ], - [ - "gene_synonym", - "NP_415247.1" - ], - [ - "gene_synonym", - "ECK0708" - ], - [ - "gene_synonym", - "ASAP:ABE-0002448" - ], - [ - "gene_synonym", - "GeneID:945325" - ], - [ - "gene_synonym", - "ybgD" - ], - [ - "gene_synonym", - "b0719" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37909" - ] - ], - "dna_sequence": "ATGTTTAAAGGACAAAAAACATTGGCCGCACTGGCCGTATCTCTGCTGTTCACTGCACCTGTTTATGCTGCTGATGAAGGTTCTGGCGAAATTCACTTTAAGGGGGAGGTTATTGAAGCACCTTGTGAAATTCATCCAGAAGATATTGATAAAAACATAGATCTTGGACAAGTCACGACAACCCATATAAACCGGGAGCATCATAGCAATAAAGTGGCCGTCGACATTCGCTTGATCAACTGTGATCTGCCTGCTTCTGACAACGGTAGCGGAATGCCGGTATCCAAAGTTGGCGTAACCTTCGATAGCACGGCTAAGACAACTGGTGCTACGCCTTTGTTGAGCAACACCAGTGCAGGCGAAGCAACTGGGGTCGGTGTACGACTGATGGACAAAAATGACGGTAACATCGTATTAGGTTCAGCCGCGCCAGATCTTGACCTGGATGCAAGCTCATCAGAACAGACGCTGAACTTTTTCGCCTGGATGGAACAAATTGATAATGCAGTCGATGTCACGGCAGGTGAAGTAACCGCTAACGCAACCTACGTGCTGGATTATAAATAA", - "dna_sequence_length": 567, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_708", - "location": [ - [ - "NC_000913", - 752795, - "-", - 567 - ] - ], - "md5": "df5b99b53116addd5bff610a4c62e073", - "parent_gene": "", - "protein_md5": "b21734bfec3bf50bf02b84178b2d21f3", - "protein_translation": "MFKGQKTLAALAVSLLFTAPVYAADEGSGEIHFKGEVIEAPCEIHPEDIDKNIDLGQVTTTHINREHHSNKVAVDIRLINCDLPASDNGSGMPVSKVGVTFDSTAKTTGATPLLSNTSAGEATGVGVRLMDKNDGNIVLGSAAPDLDLDASSSEQTLNFFAWMEQIDNAVDVTAGEVTANATYVLDYK", - "protein_translation_length": 188, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "icdB" - ], - [ - "gene_synonym", - "GI:16128695" - ], - [ - "gene_synonym", - "gluT" - ], - [ - "gene_synonym", - "ECK0709" - ], - [ - "gene_synonym", - "JW0710" - ], - [ - "gene_synonym", - "b0720" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABH7" - ], - [ - "gene_synonym", - "gltA" - ], - [ - "gene_synonym", - "NP_415248.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002451" - ], - [ - "gene_synonym", - "EcoGene:EG10402" - ], - [ - "gene_synonym", - "GeneID:945323" - ] - ], - "dna_sequence": "ATGGCTGATACAAAAGCAAAACTCACCCTCAACGGGGATACAGCTGTTGAACTGGATGTGCTGAAAGGCACGCTGGGTCAAGATGTTATTGATATCCGTACTCTCGGTTCAAAAGGTGTGTTCACCTTTGACCCAGGCTTCACTTCAACCGCATCCTGCGAATCTAAAATTACTTTTATTGATGGTGATGAAGGTATTTTGCTGCACCGCGGTTTCCCGATCGATCAGCTGGCGACCGATTCTAACTACCTGGAAGTTTGTTACATCCTGCTGAATGGTGAAAAACCGACTCAGGAACAGTATGACGAATTTAAAACTACGGTGACCCGTCATACCATGATCCACGAGCAGATTACCCGTCTGTTCCATGCTTTCCGTCGCGACTCGCATCCAATGGCAGTCATGTGTGGTATTACCGGCGCGCTGGCGGCGTTCTATCACGACTCGCTGGATGTTAACAATCCTCGTCACCGTGAAATTGCCGCGTTCCGCCTGCTGTCGAAAATGCCGACCATGGCCGCGATGTGTTACAAGTATTCCATTGGTCAGCCATTTGTTTACCCGCGCAACGATCTCTCCTACGCCGGTAACTTCCTGAATATGATGTTCTCCACGCCGTGCGAACCGTATGAAGTTAATCCGATTCTGGAACGTGCTATGGACCGTATTCTGATCCTGCACGCTGACCATGAACAGAACGCCTCTACCTCCACCGTGCGTACCGCTGGCTCTTCGGGTGCGAACCCGTTTGCCTGTATCGCAGCAGGTATTGCTTCACTGTGGGGACCTGCGCACGGCGGTGCTAACGAAGCGGCGCTGAAAATGCTGGAAGAAATCAGCTCCGTTAAACACATTCCGGAATTTGTTCGTCGTGCGAAAGACAAAAATGATTCTTTCCGCCTGATGGGCTTCGGTCACCGCGTGTACAAAAATTACGACCCGCGCGCCACCGTAATGCGTGAAACCTGCCATGAAGTGCTGAAAGAGCTGGGCACGAAGGATGACCTGCTGGAAGTGGCTATGGAGCTGGAAAACATCGCGCTGAACGACCCGTACTTTATCGAGAAGAAACTGTACCCGAACGTCGATTTCTACTCTGGTATCATCCTGAAAGCGATGGGTATTCCGTCTTCCATGTTCACCGTCATTTTCGCAATGGCACGTACCGTTGGCTGGATCGCCCACTGGAGCGAAATGCACAGTGACGGTATGAAGATTGCCCGTCCGCGTCAGCTGTATACAGGATATGAAAAACGCGACTTTAAAAGCGATATCAAGCGTTAA", 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"JW0711" - ], - [ - "gene_synonym", - "EcoGene:EG10933" - ], - [ - "gene_synonym", - "cybA" - ], - [ - "gene_synonym", - "ASAP:ABE-0002460" - ], - [ - "gene_synonym", - "sdhC" - ], - [ - "gene_synonym", - "NP_415249.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69054" - ] - ], - "dna_sequence": "ATGATAAGAAATGTGAAAAAACAAAGACCTGTTAATCTGGACCTACAGACCATCCGGTTCCCCATCACGGCGATAGCGTCCATTCTCCATCGCGTTTCCGGTGTGATCACCTTTGTTGCAGTGGGCATCCTGCTGTGGCTTCTGGGTACCAGCCTCTCTTCCCCTGAAGGTTTCGAGCAAGCTTCCGCGATTATGGGCAGCTTCTTCGTCAAATTTATCATGTGGGGCATCCTTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCTTTCACTTCTCGCAGGAGTCCTCGTATGGTAA", - "dna_sequence_length": 390, - "functions": [ - "succinate dehydrogenase, membrane subunit, binds cytochrome b556" - ], - "id": "CDS_710", - "location": [ - [ - "NC_000913", - 755177, - "+", - 390 - ] - ], - "md5": "66c8b3940197869a4ee183c72b676a35", - "parent_gene": "", - "protein_md5": "2ff14aaa99058c88cf57dad6b75d557a", - "protein_translation": "MIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW", - "protein_translation_length": 129, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002464" - ], - [ - "gene_synonym", - "GeneID:945322" - ], - [ - "gene_synonym", - "ECK0711" - ], - [ - "gene_synonym", - "GI:16128697" - ], - [ - "gene_synonym", - "EcoGene:EG10934" - ], - [ - "gene_synonym", - "NP_415250.1" - ], - [ - "gene_synonym", - "JW0712" - ], - [ - "gene_synonym", - "b0722" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC44" - ], - [ - "gene_synonym", - "sdhD" - ] - ], - "dna_sequence": "ATGGTAAGCAACGCCTCCGCATTAGGACGCAATGGCGTACATGATTTCATCCTCGTTCGCGCTACCGCTATCGTCCTGACGCTCTACATCATTTATATGGTCGGTTTTTTCGCTACCAGTGGCGAGCTGACATATGAAGTCTGGATCGGTTTCTTCGCCTCTGCGTTCACCAAAGTGTTCACCCTGCTGGCGCTGTTTTCTATCTTGATCCATGCCTGGATCGGCATGTGGCAGGTGTTGACCGACTACGTTAAACCGCTGGCTTTGCGCCTGATGCTGCAACTGGTGATTGTCGTTGCACTGGTGGTTTACGTGATTTATGGATTCGTTGTGGTGTGGGGTGTGTGA", - "dna_sequence_length": 348, - "functions": [ - "succinate dehydrogenase, membrane subunit, binds cytochrome b556" - ], - "id": "CDS_711", - "location": [ - [ - "NC_000913", - 755560, - "+", - 348 - ] - ], - "md5": "6d0e29e3c4c19456610cc438612d65b1", - "parent_gene": "", - "protein_md5": "753b0fd70db6b7058990018f6ede9e17", - "protein_translation": "MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVVWGV", - "protein_translation_length": 115, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0712" - ], - [ - "gene_synonym", - "GeneID:945402" - ], - [ - "gene_synonym", - "GI:16128698" - ], - [ - "gene_synonym", - "JW0713" - ], - [ - "gene_synonym", - "EcoGene:EG10931" - ], - [ - "gene_synonym", - "b0723" - ], - [ - "gene_synonym", - "ASAP:ABE-0002466" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC41" - ], - [ - "gene_synonym", - "NP_415251.1" - ], - [ - "gene_synonym", - "sdhA" - ] - ], - "dna_sequence": "ATGAAATTGCCAGTCAGAGAATTTGATGCAGTTGTGATTGGTGCCGGTGGCGCAGGTATGCGCGCGGCGCTGCAAATTTCCCAGAGCGGCCAGACCTGTGCGCTGCTCTCTAAAGTCTTCCCGACCCGTTCCCATACCGTTTCTGCGCAAGGCGGCATTACCGTTGCGCTGGGTAATACCCATGAAGATAACTGGGAATGGCATATGTACGACACCGTGAAAGGGTCGGACTATATCGGTGACCAGGACGCGATTGAATATATGTGTAAAACCGGGCCGGAAGCGATTCTGGAACTCGAACACATGGGCCTGCCGTTCTCGCGTCTCGATGATGGTCGTATCTATCAACGTCCGTTTGGCGGTCAGTCGAAAAACTTCGGCGGCGAGCAGGCGGCACGCACTGCGGCAGCAGCTGACCGTACCGGTCACGCACTGTTGCACACGCTTTATCAGCAGAACCTGAAAAACCACACCACCATTTTCTCCGAGTGGTATGCGCTGGATCTGGTGAAAAACCAGGATGGCGCGGTGGTGGGTTGTACCGCACTGTGCATCGAAACCGGTGAAGTGGTTTATTTCAAAGCCCGCGCTACCGTGCTGGCGACTGGCGGAGCAGGGCGTATTTATCAGTCCACCACCAACGCCCACATTAACACCGGCGACGGTGTCGGCATGGCTATCCGTGCCGGCGTACCGGTGCAGGATATGGAAATGTGGCAGTTCCACCCGACCGGCATTGCCGGTGCGGGCGTACTGGTCACCGAAGGTTGCCGTGGTGAAGGCGGTTATCTGCTGAACAAACATGGCGAACGTTTTATGGAGCGTTATGCGCCGAACGCCAAAGACCTGGCGGGCCGTGACGTGGTTGCGCGTTCCATCATGATCGAAATCCGTGAAGGTCGCGGCTGTGATGGTCCGTGGGGGCCACACGCGAAACTGAAACTCGATCACCTGGGTAAAGAAGTTCTCGAATCCCGTCTGCCGGGTATCCTGGAGCTTTCCCGTACCTTCGCTCACGTCGATCCGGTGAAAGAGCCGATTCCGGTTATCCCAACCTGTCACTACATGATGGGCGGTATTCCGACCAAAGTTACCGGTCAGGCACTGACTGTGAATGAGAAAGGCGAAGATGTGGTTGTTCCGGGACTGTTTGCCGTTGGTGAAATCGCTTGTGTATCGGTACACGGCGCTAACCGTCTGGGCGGCAACTCGCTGCTGGACCTGGTGGTCTTTGGTCGCGCGGCAGGTCTGCATCTGCAAGAGTCTATCGCCGAGCAGGGCGCACTGCGCGATGCCAGCGAGTCTGATGTTGAAGCGTCTCTGGATCGCCTGAACCGCTGGAACAATAATCGTAACGGTGAAGATCCGGTGGCGATCCGTAAAGCGCTGCAAGAATGTATGCAGCATAACTTCTCGGTCTTCCGTGAAGGTGATGCGATGGCGAAAGGGCTTGAGCAGTTGAAAGTGATCCGCGAGCGTCTGAAAAATGCCCGTCTGGATGACACTTCCAGCGAGTTCAACACCCAGCGCGTTGAGTGCCTGGAACTGGATAACCTGATGGAAACGGCGTATGCAACGGCTGTTTCTGCCAACTTCCGTACCGAAAGCCGTGGCGCGCATAGCCGCTTCGACTTCCCGGATCGTGATGATGAAAACTGGCTGTGCCACTCCCTGTATCTGCCAGAGTCGGAATCCATGACGCGCCGAAGCGTCAACATGGAACCGAAACTGCGCCCGGCATTCCCGCCGAAGATTCGTACTTACTAA", 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[ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07014" - ], - [ - "gene_synonym", - "GeneID:945300" - ], - [ - "gene_synonym", - "ECK0713" - ], - [ - "gene_synonym", - "GI:16128699" - ], - [ - "gene_synonym", - "JW0714" - ], - [ - "gene_synonym", - "EcoGene:EG10932" - ], - [ - "gene_synonym", - "b0724" - ], - [ - "gene_synonym", - "NP_415252.1" - ], - [ - "gene_synonym", - "sdhB" - ], - [ - "gene_synonym", - "ASAP:ABE-0002468" - ] - ], - "dna_sequence": "ATGAGACTCGAGTTTTCAATTTATCGCTATAACCCGGATGTTGATGATGCTCCGCGTATGCAGGATTACACCCTGGAAGCGGATGAAGGTCGCGACATGATGCTGCTGGATGCGCTTATCCAGCTAAAAGAGAAAGATCCCAGCCTGTCGTTCCGCCGCTCCTGCCGTGAAGGTGTGTGCGGTTCCGACGGTCTGAACATGAACGGCAAGAATGGTCTGGCCTGTATTACCCCGATTTCGGCACTCAACCAGCCGGGCAAGAAGATTGTGATTCGCCCGCTGCCAGGTTTACCGGTGATCCGCGATTTGGTGGTAGACATGGGACAATTCTATGCGCAATATGAGAAAATTAAGCCTTACCTGTTGAATAATGGACAAAATCCGCCAGCTCGCGAGCATTTACAGATGCCAGAGCAGCGCGAAAAACTCGACGGGCTGTATGAATGTATTCTCTGCGCATGTTGTTCAACCTCTTGTCCGTCTTTCTGGTGGAATCCCGATAAGTTTATCGGCCCGGCAGGCTTGTTAGCGGCATATCGTTTCCTGATTGATAGCCGTGATACCGAGACTGACAGCCGCCTCGACGGTTTGAGTGATGCATTCAGCGTATTCCGCTGTCACAGCATCATGAACTGCGTCAGTGTATGTCCGAAGGGGCTGAACCCGACGCGCGCCATCGGCCATATCAAGTCGATGTTGTTGCAACGTAATGCGTAA", - "dna_sequence_length": 717, - "functions": [ - "succinate dehydrogenase, FeS subunit" - ], - "id": "CDS_713", - "location": [ - [ - "NC_000913", - 757689, - "+", - 717 - ] - ], - "md5": "15a8e47bdfc6c2c8a4a1c4135ccb5f65", - "parent_gene": "", - "protein_md5": "497a2dbf0db113e210bc00046c9cabdc", - "protein_translation": "MRLEFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRNA", - "protein_translation_length": 238, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0714" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFG3" - ], - [ - "gene_synonym", - "lys" - ], - [ - "gene_synonym", - "EcoGene:EG10979" - ], - [ - "gene_synonym", - "JW0715" - ], - [ - "gene_synonym", - "sucA" - ], - [ - "gene_synonym", - "GI:16128701" - ], - [ - "gene_synonym", - "b0726" - ], - [ - "gene_synonym", - "NP_415254.1" - ], - [ - "gene_synonym", - "GeneID:945303" - ], - [ - "gene_synonym", - "ASAP:ABE-0002478" - ] - ], - "dna_sequence": "ATGCAGAACAGCGCTTTGAAAGCCTGGTTGGACTCTTCTTACCTCTCTGGCGCAAACCAGAGCTGGATAGAACAGCTCTATGAAGACTTCTTAACCGATCCTGACTCGGTTGACGCTAACTGGCGTTCGACGTTCCAGCAGTTACCTGGTACGGGAGTCAAACCGGATCAATTCCACTCTCAAACGCGTGAATATTTCCGCCGCCTGGCGAAAGACGCTTCACGTTACTCTTCAACGATCTCCGACCCTGACACCAATGTGAAGCAGGTTAAAGTCCTGCAGCTCATTAACGCATACCGCTTCCGTGGTCACCAGCATGCGAATCTCGATCCGCTGGGACTGTGGCAGCAAGATAAAGTGGCCGATCTGGATCCGTCTTTCCACGATCTGACCGAAGCAGACTTCCAGGAGACCTTCAACGTCGGTTCATTTGCCAGCGGCAAAGAAACCATGAAACTCGGCGAGCTGCTGGAAGCCCTCAAGCAAACCTACTGCGGCCCGATTGGTGCCGAGTATATGCACATTACCAGCACCGAAGAAAAACGCTGGATCCAACAGCGTATCGAGTCTGGTCGCGCGACTTTCAATAGCGAAGAGAAAAAACGCTTCTTAAGCGAACTGACCGCCGCTGAAGGTCTTGAACGTTACCTCGGCGCAAAATTCCCTGGCGCAAAACGCTTCTCGCTGGAAGGCGGTGACGCGTTAATCCCGATGCTTAAAGAGATGATCCGCCACGCTGGCAACAGCGGCACCCGCGAAGTGGTTCTCGGGATGGCGCACCGTGGTCGTCTGAACGTGCTGGTGAACGTGCTGGGTAAAAAACCGCAAGACTTGTTCGACGAGTTCGCCGGTAAACATAAAGAACACCTCGGCACGGGTGACGTGAAATACCACATGGGCTTCTCGTCTGACTTCCAGACCGATGGCGGCCTGGTGCACCTGGCGCTGGCGTTTAACCCGTCTCACCTTGAGATTGTAAGCCCGGTAGTTATCGGTTCTGTTCGTGCCCGTCTGGACAGACTTGATGAGCCGAGCAGCAACAAAGTGCTGCCAATCACCATCCACGGTGACGCCGCAGTGACCGGGCAGGGCGTGGTTCAGGAAACCCTGAACATGTCGAAAGCGCGTGGTTATGAAGTTGGCGGTACGGTACGTATCGTTATCAACAACCAGGTTGGTTTCACCACCTCTAATCCGCTGGATGCCCGTTCTACGCCGTACTGTACTGATATCGGTAAGATGGTTCAGGCCCCGATTTTCCACGTTAACGCGGACGATCCGGAAGCCGTTGCCTTTGTGACCCGTCTGGCGCTCGATTTCCGTAACACCTTTAAACGTGATGTCTTCATCGACCTGGTGTGCTACCGCCGTCACGGCCACAACGAAGCCGACGAGCCGAGCGCAACCCAGCCGCTGATGTATCAGAAAATCAAAAAACATCCGACACCGCGCAAAATCTACGCTGACAAGCTGGAGCAGGAAAAAGTGGCGACGCTGGAAGATGCCACCGAGATGGTTAACCTGTACCGCGATGCGCTGGATGCTGGCGATTGCGTAGTGGCAGAGTGGCGTCCGATGAACATGCACTCTTTCACCTGGTCGCCGTACCTCAACCACGAATGGGACGAAGAGTACCCGAACAAAGTTGAGATGAAGCGCCTGCAGGAGCTGGCGAAACGCATCAGCACGGTGCCGGAAGCAGTTGAAATGCAGTCTCGCGTTGCCAAGATTTATGGCGATCGCCAGGCGATGGCTGCCGGTGAGAAACTGTTCGACTGGGGCGGTGCGGAAAACCTCGCTTACGCCACGCTGGTTGATGAAGGCATTCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGCGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCAGGTGGTTATCGACCAGTTCATCTCCTCTGGCGAACAGAAATGGGGCCGGATGTGTGGTCTGGTGATGTTGCTGCCGCACGGTTACGAAGGGCAGGGGCCGGAGCACTCCTCCGCGCGTCTGGAACGTTATCTGCAACTTTGTGCTGAGCAAAACATGCAGGTTTGCGTACCGTCTACCCCGGCACAGGTTTACCACATGCTGCGTCGTCAGGCGCTGCGCGGGATGCGTCGTCCGCTGGTCGTGATGTCGCCGAAATCCCTGCTGCGTCATCCGCTGGCGGTTTCCAGCCTCGAAGAACTGGCGAACGGCACCTTCCTGCCAGCCATCGGTGAAATCGACGAGCTTGATCCGAAGGGCGTGAAGCGCGTAGTGATGTGTTCTGGTAAGGTTTATTACGACCTGCTGGAACAGCGTCGTAAGAACAATCAACACGATGTCGCCATTGTGCGTATCGAGCAACTCTACCCGTTCCCGCATAAAGCGATGCAGGAAGTGTTGCAGCAGTTTGCTCACGTCAAGGATTTTGTCTGGTGCCAGGAAGAGCCGCTCAACCAGGGCGCATGGTACTGCAGCCAGCATCATTTCCGTGAAGTGATTCCGTTTGGGGCTTCTCTGCGTTATGCAGGCCGCCCGGCCTCCGCCTCTCCGGCGGTAGGGTATATGTCCGTTCACCAGAAACAGCAACAAGATCTGGTTAATGACGCGCTGAACGTCGAATAA", - "dna_sequence_length": 2802, - "functions": [ - "2-oxoglutarate decarboxylase, thiamine triphosphate-binding" - ], - "id": "CDS_714", - "location": [ - [ - "NC_000913", - 758706, - "+", - 2802 - ] - ], - "md5": "6fdab24387d9618535979e0ee4e07c7b", - "parent_gene": "", - "protein_md5": "5cf06ce62b9e2618a775454fd37dbb54", - "protein_translation": "MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE", - "protein_translation_length": 933, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0715" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFG6" - ], - [ - "gene_synonym", - "JW0716" - ], - [ - "gene_synonym", - "GI:16128702" - ], - [ - "gene_synonym", - "EcoGene:EG10980" - ], - [ - "gene_synonym", - "sucB" - ], - [ - "gene_synonym", - "b0727" - ], - [ - "gene_synonym", - "ASAP:ABE-0002480" - ], - [ - "gene_synonym", - "GeneID:945307" - ], - [ - "gene_synonym", - "NP_415255.1" - ] - ], - "dna_sequence": "ATGAGTAGCGTAGATATTCTGGTCCCTGACCTGCCTGAATCCGTAGCCGATGCCACCGTCGCAACCTGGCATAAAAAACCCGGCGACGCAGTCGTACGTGATGAAGTGCTGGTAGAAATCGAAACTGACAAAGTGGTACTGGAAGTACCGGCATCAGCAGACGGCATTCTGGATGCGGTTCTGGAAGATGAAGGTACAACGGTAACGTCTCGTCAGATCCTTGGTCGCCTGCGTGAAGGCAACAGCGCCGGTAAAGAAACCAGCGCCAAATCTGAAGAGAAAGCGTCCACTCCGGCGCAACGCCAGCAGGCGTCTCTGGAAGAGCAAAACAACGATGCGTTAAGCCCGGCGATCCGTCGCCTGCTGGCTGAACACAATCTCGACGCCAGCGCCATTAAAGGCACCGGTGTGGGTGGTCGTCTGACTCGTGAAGATGTGGAAAAACATCTGGCGAAAGCCCCGGCGAAAGAGTCTGCTCCGGCAGCGGCTGCTCCGGCGGCGCAACCGGCTCTGGCTGCACGTAGTGAAAAACGTGTCCCGATGACTCGCCTGCGTAAGCGTGTGGCAGAGCGTCTGCTGGAAGCGAAAAACTCCACCGCCATGCTGACCACGTTCAACGAAGTCAACATGAAGCCGATTATGGATCTGCGTAAGCAGTACGGTGAAGCGTTTGAAAAACGCCACGGCATCCGTCTGGGCTTTATGTCCTTCTACGTGAAAGCGGTGGTTGAAGCCCTGAAACGTTACCCGGAAGTGAACGCTTCTATCGACGGCGATGACGTGGTTTACCACAACTATTTCGACGTCAGCATGGCGGTTTCTACGCCGCGCGGCCTGGTGACGCCGGTTCTGCGTGATGTCGATACCCTCGGCATGGCAGACATCGAGAAGAAAATCAAAGAGCTGGCAGTCAAAGGCCGTGACGGCAAGCTGACCGTTGAAGATCTGACCGGTGGTAACTTCACCATCACCAACGGTGGTGTGTTCGGTTCCCTGATGTCTACGCCGATCATCAACCCGCCGCAGAGCGCAATTCTGGGTATGCACGCTATCAAAGATCGTCCGATGGCGGTGAATGGTCAGGTTGAGATCCTGCCGATGATGTACCTGGCGCTGTCCTACGATCACCGTCTGATCGATGGTCGCGAATCCGTGGGCTTCCTGGTAACGATCAAAGAGTTGCTGGAAGATCCGACGCGTCTGCTGCTGGACGTGTAG", - "dna_sequence_length": 1218, - "functions": [ - "dihydrolipoyltranssuccinase" - ], - "id": "CDS_715", - "location": [ - [ - "NC_000913", - 761522, - "+", - 1218 - ] - ], - "md5": "afe1c619799f25b1263bcceaaafa66ce", - "parent_gene": "", - "protein_md5": "e7d1fcbc78938f9ff5476c58816c821b", - "protein_translation": "MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQQASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAPAAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV", - "protein_translation_length": 405, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945312" - ], - [ - "gene_synonym", - "ECK0716" - ], - [ - "gene_synonym", - "NP_415256.1" - ], - [ - "gene_synonym", - "JW0717" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A836" - ], - [ - "gene_synonym", - "EcoGene:EG10981" - ], - [ - "gene_synonym", - "GI:16128703" - ], - [ - "gene_synonym", - "sucC" - ], - [ - "gene_synonym", - "ASAP:ABE-0002483" - ], - [ - "gene_synonym", - "b0728" - ] - ], - "dna_sequence": "ATGAACTTACATGAATATCAGGCAAAACAACTTTTTGCCCGCTATGGCTTACCAGCACCGGTGGGTTATGCCTGTACTACTCCGCGCGAAGCAGAAGAAGCCGCTTCAAAAATCGGTGCCGGTCCGTGGGTAGTGAAATGTCAGGTTCACGCTGGTGGCCGCGGTAAAGCGGGCGGTGTGAAAGTTGTAAACAGCAAAGAAGACATCCGTGCTTTTGCAGAAAACTGGCTGGGCAAGCGTCTGGTAACGTATCAAACAGATGCCAATGGCCAACCGGTTAACCAGATTCTGGTTGAAGCAGCGACCGATATCGCTAAAGAGCTGTATCTCGGTGCCGTTGTTGACCGTAGTTCCCGTCGTGTGGTCTTTATGGCCTCCACCGAAGGCGGCGTGGAAATCGAAAAAGTGGCGGAAGAAACTCCGCACCTGATCCATAAAGTTGCGCTTGATCCGCTGACTGGCCCGATGCCGTATCAGGGACGCGAGCTGGCGTTCAAACTGGGTCTGGAAGGTAAACTGGTTCAGCAGTTCACCAAAATCTTCATGGGCCTGGCGACCATTTTCCTGGAGCGCGACCTGGCGTTGATCGAAATCAACCCGCTGGTCATCACCAAACAGGGCGATCTGATTTGCCTCGACGGCAAACTGGGCGCTGACGGCAACGCACTGTTCCGCCAGCCTGATCTGCGCGAAATGCGTGACCAGTCGCAGGAAGATCCGCGTGAAGCACAGGCTGCACAGTGGGAACTGAACTACGTTGCGCTGGACGGTAACATCGGTTGTATGGTTAACGGCGCAGGTCTGGCGATGGGTACGATGGACATCGTTAAACTGCACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCATCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGACGGTATCATCGGCGCGGTAGCAGAAGTGGGTGTTAACGTACCGGTCGTGGTACGTCTGGAAGGTAACAACGCCGAACTCGGCGCGAAGAAACTGGCTGACAGCGGCCTGAATATTATTGCAGCAAAAGGTCTGACGGATGCAGCTCAGCAGGTTGTTGCCGCAGTGGAGGGGAAATAA", - "dna_sequence_length": 1167, - "functions": [ - "succinyl-CoA synthetase, beta subunit" - ], - "id": "CDS_716", - "location": [ - [ - "NC_000913", - 763014, - "+", - 1167 - ] - ], - "md5": "6e8b7961e10b62aa34541b8e794b8ebc", - "parent_gene": "", - "protein_md5": "d3e359441fbb6d15ad5d4ade4c910750", - "protein_translation": "MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK", - "protein_translation_length": 388, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10982" - ], - [ - "gene_synonym", - "NP_415257.1" - ], - [ - "gene_synonym", - "ECK0717" - ], - [ - "gene_synonym", - "JW0718" - ], - [ - "gene_synonym", - "GeneID:945314" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGE9" - ], - [ - "gene_synonym", - "ASAP:ABE-0002485" - ], - [ - "gene_synonym", - "sucD" - ], - [ - "gene_synonym", - "GI:16128704" - ], - [ - "gene_synonym", - "b0729" - ] - ], - "dna_sequence": "ATGTCCATTTTAATCGATAAAAACACCAAGGTTATCTGCCAGGGCTTTACCGGTAGCCAGGGGACTTTCCACTCAGAACAGGCCATTGCATACGGCACTAAAATGGTTGGCGGCGTAACCCCAGGTAAAGGCGGCACCACCCACCTCGGCCTGCCGGTGTTCAACACCGTGCGTGAAGCCGTTGCTGCCACTGGCGCTACCGCTTCTGTTATCTACGTACCAGCACCGTTCTGCAAAGACTCCATTCTGGAAGCCATCGACGCAGGCATCAAACTGATTATCACCATCACTGAAGGCATCCCGACGCTGGATATGCTGACCGTGAAAGTGAAGCTGGATGAAGCAGGCGTTCGTATGATCGGCCCGAACTGCCCAGGCGTTATCACTCCGGGTGAATGCAAAATCGGTATCCAGCCTGGTCACATTCACAAACCGGGTAAAGTGGGTATCGTTTCCCGTTCCGGTACACTGACCTATGAAGCGGTTAAACAGACCACGGATTACGGTTTCGGTCAGTCGACCTGTGTCGGTATCGGCGGTGACCCGATCCCGGGCTCTAACTTTATCGACATTCTCGAAATGTTCGAAAAAGATCCGCAGACCGAAGCGATCGTGATGATCGGTGAGATCGGCGGTAGCGCTGAAGAAGAAGCAGCTGCGTACATCAAAGAGCACGTTACCAAGCCAGTTGTGGGTTACATCGCTGGTGTGACTGCGCCGAAAGGCAAACGTATGGGCCACGCGGGTGCCATCATTGCCGGTGGGAAAGGGACTGCGGATGAGAAATTCGCTGCTCTGGAAGCCGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAA", - "dna_sequence_length": 870, - "functions": [ - "succinyl-CoA synthetase, NAD(P)-binding, alpha subunit" - ], - "id": "CDS_717", - "location": [ - [ - "NC_000913", - 764180, - "+", - 870 - ] - ], - "md5": "e0c4443ded091533b5070861b0c0882a", - "parent_gene": "", - "protein_md5": "952a12588809478949035bbbb8605308", - "protein_translation": "MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK", - "protein_translation_length": 289, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "mngR" - ], - [ - "gene_synonym", - "EcoGene:EG11109" - ], - [ - "gene_synonym", - "JW0719" - ], - [ - "gene_synonym", - "ASAP:ABE-0002487" - ], - [ - "gene_synonym", - "GI:16128705" - ], - [ - "gene_synonym", - "ECK0718" - ], - [ - "gene_synonym", - "NP_415258.1" - ], - [ - "gene_synonym", - "b0730" - ], - [ - "gene_synonym", - "ybgB" - ], - [ - "gene_synonym", - "farR" - ], - [ - "gene_synonym", - "GeneID:945371" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P13669" - ] - ], - "dna_sequence": "ATGGGACACAAGCCCTTATACCGGCAGATTGCCGATCGCATTCGTGAACAAATTGCGCGTGGCGAGCTTAAACCTGGCGATGCGTTACCCACTGAATCAGCGCTACAAACAGAGTTTGGCGTCAGCCGGGTTACGGTGCGTCAGGCTTTGCGCCAGCTAGTCGAGCAGCAGATCCTCGAAAGCATTCAGGGCAGCGGGACTTACGTCAAAGAAGAGCGGGTCAATTACGATATTTTTCAGTTAACCAGTTTTGATGAAAAACTGTCGGACCGTCACGTCGATACACACAGTGAAGTTCTGATATTCGAAGTGATTCCGGCTGACGATTTTCTTCAGCAACAGCTACAAATCACCCCGCAGGATCGTGTGTGGCATGTGAAGCGCGTGCGCTATCGCAAGCAAAAGCCAATGGCGCTGGAAGAAACCTGGATGCCGCTTGCGTTGTTCCCGGATCTCACCTGGCAGGTCATGGAAAATTCGAAATATCACTTTATCGAAGAAGTGAAGAAAATGGTTATCGATCGTAGCGAACAGGAAATCATTCCTCTGATGCCAACCGAAGAGATGAGCCGTCTGCTTAATATCAGCCAGACAAAGCCGATTCTTGAAAAAGTATCGCGTGGATATTTAGTTGATGGTCGGGTGTTTGAATATAGCCGCAACGCTTTTAATACCGATGACTATAAATTTACCCTGATAGCGCAGCGAAAATCATCGCGATAA", - "dna_sequence_length": 723, - "functions": [ - "transcriptional repressor for the mannosyl-D-glycerate catabolic operon" - ], - "id": "CDS_718", - "location": [ - [ - "NC_000913", - 765875, - "-", - 723 - ] - ], - "md5": "6576c743d62157eefdbb2885ce2e0b4d", - "parent_gene": "", - "protein_md5": "ba79ccaf2c42986b22377382b12c8017", - "protein_translation": "MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIFEVIPADDFLQQQLQITPQDRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENSKYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEYSRNAFNTDDYKFTLIAQRKSSR", - "protein_translation_length": 240, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hrsA" - ], - [ - "gene_synonym", - "EcoGene:EG13235" - ], - [ - "gene_synonym", - "JW0720" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P54745" - ], - [ - "gene_synonym", - "ECK0719" - ], - [ - "gene_synonym", - "NP_415259.1" - ], - [ - "gene_synonym", - "b0731" - ], - [ - "gene_synonym", - "mngA" - ], - [ - "gene_synonym", - "GeneID:945355" - ], - [ - "gene_synonym", - "GI:16128706" - ], - [ - "gene_synonym", - "ASAP:ABE-0002493" - ] - ], - "dna_sequence": "ATGGTATTGTTTTATCGGGCACACTGGCGCGACTATAAAAACGATCAAGTGAGGATCATGATGAATCTGACGACTCTGACCCACCGCGATGCGTTGTGTCTGAATGCGCGCTTTACCAGCCGTGAAGAGGCCATCCACGCGTTGACTCAACGTCTTGCTGCTCTGGGGAAAATTTCCAGTACTGAGCAATTTCTGGAAGAAGTGTATCGCCGTGAAAGCCTTGGCCCGACCGCCTTAGGTGAAGGGTTGGCTGTGCCGCATGGCAAAACTGCTGCGGTAAAAGAAGCGGCGTTTGCGGTCGCCACACTCAGCGAGCCGCTTCAGTGGGAAGGCGTTGATGGCCCGGAAGCAGTTGATTTAGTGGTGCTGCTGGCGATTCCCCCCAATGAAGCGGGTACTACGCATATGCAACTGCTGACAGCGCTGACCACGCGCCTTGCGGATGATGAGATTCGGGCGCGTATACAGTCGGCGACGACGCCTGATGAGTTGCTCTCGGCGCTGGATGACAAGGGAGGCACGCAACCTTCTGCCTCTTTTTCCAACGCGCCAACTATCGTCTGCGTAACGGCCTGTCCGGCGGGTATTGCTCACACCTATATGGCTGCGGAATATCTGGAAAAAGCCGGACGCAAACTCGGCGTAAATGTTTACGTTGAAAAACAAGGCGCTAACGGCATTGAAGGGCGTTTAACGGCGGATCAACTCAATAGTGCAACCGCCTGTATTTTTGCGGCTGAAGTCGCCATCAAGGAGAGTGAGCGTTTTAATGGCATTCCCGCGCTTTCAGTGCCTGTTGCCGAGCCGATTCGCCATGCAGAAGCGTTGATCCAACAAGCGCTTACCCTCAAGCGTAGCGATGAGACGCGTACCGTACAGCAAGATACGCAACCGGTGAAAAGTGTCAAAACGGAGCTGAAACAGGCACTGTTGAGCGGAATCTCTTTTGCCGTACCGTTGATTGTCGCGGGGGGCACGGTGCTGGCGGTCGCGGTATTACTGTCGCAAATCTTCGGGCTACAAGATCTGTTTAATGAAGAAAACTCCTGGCTGTGGATGTACCGCAAGCTGGGCGGCGGGCTGCTCGGAATTTTGATGGTACCGGTGCTCGCGGCCTATACCGCCTATTCTCTGGCAGATAAACCGGCGTTAGCGCCAGGCTTTGCGGCTGGACTTGCCGCCAACATGATCGGCTCCGGGTTTCTCGGCGCGGTCGTTGGCGGATTGATAGCCGGTTACTTGATGCGCTGGGTGAAAAATCACTTGCGTCTTAGCAGTAAATTCAATGGATTCCTGACTTTTTATCTCTACCCGGTGCTCGGTACGTTGGGAGCGGGCAGTCTGATGCTGTTTGTGGTGGGGGAACCTGTCGCCTGGATCAATAACTCGCTTACCGCCTGGCTGAACGGTCTGTCAGGAAGTAACGCGCTGTTGCTGGGTGCCATTCTCGGTTTTATGTGTTCCTTTGACCTTGGAGGGCCAGTGAATAAAGCCGCTTATGCATTCTGCCTGGGCGCAATGGCGAACGGCGTTTACGGCCCGTATGCCATTTTCGCCTCCGTCAAAATGGTTTCGGCATTTACCGTAACCGCTTCCACGATGCTCGCACCGCGCCTGTTTAAAGAGTTTGAAATTGAGACCGGGAAATCCACCTGGCTGTTAGGGCTGGCAGGTATTACCGAAGGGGCGATCCCGATGGCGATTGAAGATCCGCTGCGGGTTATTGGTTCGTTTGTGCTGGGCTCTATGGTAACGGGCGCTATTGTCGGTGCGATGAATATCGGCCTTTCGACACCCGGTGCCGGCATTTTCTCGCTCTTTTTACTTCATGATAATGGCGCGGGCGGTGTTATGGCGGCAATTGGCTGGTTTGGCGCGGCATTGGTGGGGGCTGCAATCTCGACTGCAATTCTCCTGATGTGGCGGCGTCACGCGGTTAAGCATGGCAACTATCTGACTGATGGCGTAATGCCATAA", - "dna_sequence_length": 1977, - "functions": [ - "fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component" - ], - "id": "CDS_719", - "location": [ - [ - "NC_000913", - 765984, - "+", - 1977 - ] - ], - "md5": "c49fe5a59541a13e5941849c0d7faac6", - "parent_gene": "", - "protein_md5": "9630067511ac7a773b5b05692521945a", - "protein_translation": "MVLFYRAHWRDYKNDQVRIMMNLTTLTHRDALCLNARFTSREEAIHALTQRLAALGKISSTEQFLEEVYRRESLGPTALGEGLAVPHGKTAAVKEAAFAVATLSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTTHMQLLTALTTRLADDEIRARIQSATTPDELLSALDDKGGTQPSASFSNAPTIVCVTACPAGIAHTYMAAEYLEKAGRKLGVNVYVEKQGANGIEGRLTADQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEALIQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLLSQIFGLQDLFNEENSWLWMYRKLGGGLLGILMVPVLAAYTAYSLADKPALAPGFAAGLAANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLMLFVVGEPVAWINNSLTAWLNGLSGSNALLLGAILGFMCSFDLGGPVNKAAYAFCLGAMANGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPMAIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWFGAALVGAAISTAILLMWRRHAVKHGNYLTDGVMP", - "protein_translation_length": 658, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13236" - ], - [ - "gene_synonym", - "ECK0720" - ], - [ - "gene_synonym", - "JW0721" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P54746" - ], - [ - "gene_synonym", - "NP_415260.1" - ], - [ - "gene_synonym", - "mngB" - ], - [ - "gene_synonym", - "b0732" - ], - [ - "gene_synonym", - "GI:16128707" - ], - [ - "gene_synonym", - "ybgG" - ], - [ - "gene_synonym", - "ASAP:ABE-0002495" - ], - [ - "gene_synonym", - "GeneID:945359" - ] - ], - "dna_sequence": "ATGAAAGCAGTATCTCGCGTTCACATCACCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGACCGTGTGAAGAAACAGGTAGAAGCCGGCAAGTTGATTATCGGCCCCTGGTATACCCAGACCGATACCACGATTGTTTCTGCGGAATCCATCGTCCGTAATCTGATGTACGGAATGCGTGACTGCCTCGCGTTTGGCGAGCCGATGAAAATAGGTTATTTACCAGATTCCTTTGGCATGTCCGGGCAACTGCCGCATATCTACAATGGATTTGGCATTACCCGCACCATGTTCTGGCGCGGATGTTCGGAGCGCCACGGTACTGATAAAACCGAGTTTTTGTGGCAAAGCAGTGACGGTAGCGAAGTGACGGCGCAGGTGCTGCCGCTGGGCTACGCCATCGGTAAGTACTTACCTGCCGACGAAAACGGATTACGTAAACGCCTCGACAGTTATTTTGACGTGCTGGAAAAAGCGTCTGTAACCAAAGAGATTTTGCTGCCGAATGGGCATGACCAGATGCCATTGCAGCAAAATATCTTCGAAGTGATGGATAAGCTACGTGAGATCTACCCTCAACGTAAGTTTGTGATGAGCCGCTTTGAAGAGGTATTTGAGAAGATCGAAGCGCAGCGAGATAATCTGGCAACCCTGAAAGGGGAATTTATTGATGGCAAATATATGCGCGTGCATCGCACCATCGGTTCTACGCGTATGGATATCAAAATTGCCCACGCGCGTATTGAAAATAAGATTGTTAATCTGCTGGAACCGCTGGCAACACTGGCCTGGACGTTGGGTTTTGAATACCACCACGGCTTGCTGGAGAAAATGTGGAAAGAGATCTTAAAAAATCATGCCCACGACAGTATCGGCTGCTGCTGTAGTGACAAAGTTCATCGCGAAATCGTCGCCCGCTTCGAACTGGCTGAAGACATGGCGGATAATCTGATTCGTTTCTACATGCGCAAAATTGCCGACAACATGCCGCAGAGCGACGCCGACAAACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGACGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTAATTACGATCCCTTTATGGAGTTTGATATACAGATCAACCAGATTGTCCCTTCTATGGGCTATCGCACGCTTTATATCGAAGCGAATCAGCCTGGCAACGTAATTGCGGCAAAAAGTGACGCTGAAGGGATACTGGAAAATGCTTTCTGGCAAATTGCGCTCAATGAGGATGGTTCTCTGCAACTGGTAGATAAAGACAGCGGTGTGCGCTATGACCGGGTATTGCAAATTGAAGAAAGCTCTGATGATGGTGATGAATATGACTATTCACCCGCAAAAGAAGAGTGGGTAATTACCGCAGCGAACGCGAAACCGCAATGCGATATTATTCATGAAGCCTGGCAGAGCAGGGCTGTTATCCGCTATGACATGGCAGTGCCGCTCAATTTGTCAGAACGCAGCGCCCGGCAATCCACTGGCAGAGTAGGGGTGGTGTTGGTTGTCACTCTTAGTCATAACAGCAGGCGTATTGATGTGGATATCAATCTTGATAACCAGGCTGACGATCATCGCCTTCGTGTCCTGGTCCCTACACCTTTTAACACCGACAGTGTTCTGGCAGATACGCAGTTTGGTTCGCTAACGCGCCCCGTGAACGACAGTGCAATGAACAACTGGCAGCAAGAAGGCTGGAAAGAAGCGCCGGTTCCGGTATGGAATATGCTCAACTATGTTGCCTTACAGGAAGGGCGTAACGGCATGGCTGTCTTTAGCGAAGGGTTACGTGAATTTGAAGTCATCGGTGAAGAGAAGAAAACCTTTGCCATTACGTTGCTGCGTGGCGTGGGCTTACTGGGCAAAGAAGATCTGCTTTTAAGGCCTGGGCGGCCTTCGGGAATTAAAATGCCAGTCCCGGACTCACAACTACGTGGTCTGCTTTCTTGTCGCCTAAGTTTATTGAGTTATACCGGTACGCCAACCGCCGCTGGTGTAGCTCAGCAGGCGCGAGCATGGCTGACTCCAGTACAGTGTTACAACAAAATCCCATGGGATGTGATGAAGCTCAACAAAGCCGGATTCAACGTGCCGGAAAGTTATAGTTTGTTGAAAATGCCCCCAGTGGGATGCCTGATAAGCGCACTTAAGAAAGCTGAAGACCGACAAGAAGTGATTTTACGGCTGTTTAATCCGGCTGAATCAGCAACCTGTGATGCGACTGTTGCTTTCAGTCGCGAGGTGATTTCTTGCTCAGAAACGATGATGGATGAACACATTACCACCGAGGAAAATCAAGGTTCAAATCTATCGGGGCCTTTTTTACCCGGCCAGTCACGGACGTTCAGTTACCGGCTTGCCTGA", 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"MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILEDYFAVKPENKDRVKKQVEAGKLIIGPWYTQTDTTIVSAESIVRNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDKTEFLWQSSDGSEVTAQVLPLGYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLPNGHDQMPLQQNIFEVMDKLREIYPQRKFVMSRFEEVFEKIEAQRDNLATLKGEFIDGKYMRVHRTIGSTRMDIKIAHARIENKIVNLLEPLATLAWTLGFEYHHGLLEKMWKEILKNHAHDSIGCCCSDKVHREIVARFELAEDMADNLIRFYMRKIADNMPQSDADKLVLFNLMPWPREEVINTTVRLRASQFNLRDDRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPFMEFDIQINQIVPSMGYRTLYIEANQPGNVIAAKSDAEGILENAFWQIALNEDGSLQLVDKDSGVRYDRVLQIEESSDDGDEYDYSPAKEEWVITAANAKPQCDIIHEAWQSRAVIRYDMAVPLNLSERSARQSTGRVGVVLVVTLSHNSRRIDVDINLDNQADDHRLRVLVPTPFNTDSVLADTQFGSLTRPVNDSAMNNWQQEGWKEAPVPVWNMLNYVALQEGRNGMAVFSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQLRGLLSCRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDVMKLNKAGFNVPESYSLLKMPPVGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEENQGSNLSGPFLPGQSRTFSYRLA", - "protein_translation_length": 877, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0721" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABJ9" - ], - [ - "gene_synonym", - "JW0722" - ], - [ - "gene_synonym", - "NP_415261.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0002499" - ], - [ - "gene_synonym", - "GeneID:945341" - ], - [ - "gene_synonym", - "b0733" - ], - [ - "gene_synonym", - "GI:90111166" - ], - [ - "gene_synonym", - "cydA" - ], - [ - "gene_synonym", - "EcoGene:EG10173" - ] - ], - "dna_sequence": "ATGTTAGATATAGTCGAACTGTCGCGCTTACAGTTTGCCTTGACCGCGATGTACCACTTCCTTTTTGTGCCACTGACGCTCGGTATGGCGTTCCTGCTGGCCATTATGGAAACGGTCTACGTCCTCTCCGGCAAACAGATTTATAAAGATATGACCAAGTTCTGGGGCAAGTTGTTTGGTATCAACTTCGCTCTGGGTGTGGCTACCGGTCTGACCATGGAGTTCCAGTTCGGGACTAACTGGTCTTACTATTCCCACTATGTAGGGGATATCTTCGGTGCGCCGCTGGCAATCGAAGGTCTGATGGCCTTCTTCCTCGAATCCACCTTTGTAGGTCTGTTCTTCTTCGGTTGGGATCGTCTGGGTAAAGTTCAGCATATGTGTGTCACCTGGCTGGTGGCGCTCGGTTCAAACCTGTCCGCACTGTGGATTCTGGTTGCGAACGGCTGGATGCAAAACCCAATCGCGTCCGATTTCAACTTTGAAACTATGCGTATGGAGATGGTGAGCTTCTCCGAGCTGGTGCTTAACCCGGTTGCTCAGGTGAAATTCGTTCACACTGTAGCGTCTGGTTATGTGACTGGCGCGATGTTCATCCTCGGTATCAGCGCATGGTATATGCTGAAAGGTCGTGACTTCGCCTTCGCTAAACGCTCCTTTGCTATCGCTGCCAGCTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAACCAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAAGAGGAGACGAACAAATTTGCGATTCAGATCCCTTACGCACTGGGCATCATTGCAACGCGTTCCGTGGATACCCCGGTTATCGGCCTGAAAGAGCTGATGGTGCAGCATGAAGAACGCATTCGTAACGGGATGAAGGCGTACTCTCTGCTCGAACAACTGCGTTCTGGTTCTACCGACCAGGCGGTTCGTGACCAGTTCAATAGCATGAAGAAAGACCTCGGTTACGGTCTGCTGCTGAAACGCTATACGCCAAACGTGGCTGATGCGACTGAAGCGCAGATTCAACAGGCAACCAAAGACTCCATCCCGCGTGTAGCGCCGCTGTACTTTGCGTTCCGTATCATGGTGGCGTGTGGCTTCCTGCTTCTGGCAATCATCGCGCTCTCTTTCTGGAGTGTCATCCGCAACCGCATTGGCGAGAAAAAATGGCTTCTGCGCGCCGCGCTGTACGGTATTCCGCTGCCGTGGATTGCTGTAGAAGCGGGCTGGTTCGTGGCTGAATATGGCCGCCAACCGTGGGCTATCGGTGAAGTGCTGCCGACAGCTGTGGCGAACTCGTCACTGACCGCAGGCGATCTCATCTTCTCAATGGTGCTGATTTGCGGCCTGTATACCCTGTTCCTGGTGGCAGAATTGTTCTTAATGTTCAAGTTTGCACGCCTCGGCCCAAGCAGCCTGAAAACCGGTCGCTATCACTTTGAGCAGTCTTCCACGACTACTCAGCCGGCACGCTAA", 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"JW0723" - ], - [ - "gene_synonym", - "GeneID:945347" - ], - [ - "gene_synonym", - "b0734" - ], - [ - "gene_synonym", - "ASAP:ABE-0002501" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABK2" - ], - [ - "gene_synonym", - "NP_415262.1" - ], - [ - "gene_synonym", - "cydB" - ], - [ - "gene_synonym", - "GI:16128709" - ], - [ - "gene_synonym", - "EcoGene:EG10174" - ] - ], - "dna_sequence": "ATGATCGATTATGAAGTATTGCGTTTTATCTGGTGGCTGCTGGTTGGCGTTCTGCTGATTGGTTTTGCAGTCACTGACGGTTTCGACATGGGGGTGGGCATGCTCACCCGTTTCCTCGGTCGTAACGACACCGAGCGTCGAATTATGATTAACTCCATTGCACCACACTGGGACGGTAACCAGGTTTGGCTGATCACCGCGGGCGGCGCACTCTTTGCTGCCTGGCCGATGGTCTATGCCGCTGCGTTCTCCGGCTTCTATGTGGCGATGATCCTCGTGCTGGCGTCTTTGTTCTTCCGTCCGGTCGGTTTTGACTACCGCTCCAAGATTGAAGAAACCCGCTGGCGTAACATGTGGGACTGGGGCATCTTCATTGGTAGCTTCGTTCCGCCGCTGGTAATTGGTGTAGCGTTCGGTAACCTGTTGCAGGGCGTACCGTTCAACGTTGATGAATATCTGCGTCTGTACTACACCGGTAACTTCTTCCAGTTGCTTAACCCGTTCGGCCTGCTGGCAGGCGTGGTGAGCGTAGGGATGATCATTACTCAGGGCGCAACCTATCTGCAAATGCGTACCGTGGGCGAACTGCACCTGCGTACCCGTGCAACGGCTCAGGTGGCTGCGCTGGTGACACTGGTCTGTTTCGCACTGGCTGGCGTATGGGTGATGTACGGTATCGATGGTTATGTCGTGAAATCGACAATGGACCATTACGCAGCCTCTAACCCACTGAATAAAGAAGTGGTTCGTGAAGCTGGCGCATGGCTGGTTAACTTCAACAACACGCCAATTCTGTGGGCTATTCCGGCACTGGGTGTGGTTCTGCCGCTGCTGACCATCCTGACTGCACGTATGGATAAAGCCGCGTGGGCGTTTGTGTTCTCCTCCCTGACGCTGGCCTGCATCATCCTGACAGCCGGTATCGCAATGTTCCCGTTTGTGATGCCGTCCAGCACCATGATGAACGCAAGTCTGACAATGTGGGATGCAACTTCCAGCCAGCTGACGCTTAACGTCATGACCTGGGTTGCGGTGGTTCTGGTACCGATCATTCTGCTCTACACCGCCTGGTGTTACTGGAAAATGTTCGGTCGTATCACCAAAGAAGATATTGAACGTAACACCCACTCTCTGTACTAA", 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- ], - [ - "gene_synonym", - "JW0724" - ], - [ - "gene_synonym", - "GI:94541102" - ], - [ - "gene_synonym", - "EcoGene:EG14329" - ], - [ - "gene_synonym", - "b4515" - ], - [ - "gene_synonym", - "YP_588444.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0285036" - ] - ], - "dna_sequence": "ATGTGGTATTTCGCATGGATTCTGGGAACGCTTCTTGCCTGTTCGTTTGGGGTAATCACCGCGCTGGCGCTTGAACACGTCGAATCAGGCAAAGCCGGTCAAGAAGACATCTGA", - "dna_sequence_length": 114, - "functions": [ - "cytochrome d (bd-I) ubiquinol oxidase subunit X" - ], - "id": "CDS_723", - "location": [ - [ - "NC_000913", - 774196, - "+", - 114 - ] - ], - "md5": "ad9aeb5d808f0a04ff22037366fbfcd1", - "parent_gene": "", - "protein_md5": "9e441c32db8af40efbbc54336b0dd9dc", - "protein_translation": "MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI", - "protein_translation_length": 37, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945326" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAV0" - ], - [ - "gene_synonym", - "JW0725" - ], - [ - "gene_synonym", - "ECK0724" - ], - [ - "gene_synonym", - "ASAP:ABE-0002505" - ], - [ - "gene_synonym", - "b0735" - ], - [ - "gene_synonym", - "ybgE" - ], - [ - "gene_synonym", - "EcoGene:EG12395" - ], - [ - "gene_synonym", - "NP_415263.1" - ], - [ - "gene_synonym", - "GI:16128710" - ] - ], - "dna_sequence": "ATGAGTAAGATTATCGCGACTTTGTATGCGGTAATGGACAAGCGCCCCCTGCGGGCGCTTTCCTTCGTGATGGCGCTTCTGTTAGCAGGATGTATGTTTTGGGACCCATCTCGTTTTGCCGCGAAGACCAGTGAACTGGAAATCTGGCATGGTTTATTGCTGATGTGGGCCGTCTGTGCTGGTGTGATTCACGGCGTGGGCTTTCGTCCGCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAA", - "dna_sequence_length": 294, - "functions": [ - "putative inner membrane protein in cydABX-ybgE operon" - ], - "id": "CDS_724", - "location": [ - [ - "NC_000913", - 774309, - "+", - 294 - ] - ], - "md5": "63f4236ac48bfcacc62de96050e7fa11", - "parent_gene": "", - "protein_md5": "1ed5362504934d484cbe923df0583e6c", - "protein_translation": "MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTSELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFCPLLADIVLIVGLIFFFF", - "protein_translation_length": 97, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0726" - ], - [ - "gene_synonym", - "ECK0725" - ], - [ - "gene_synonym", - "GeneID:948907" - ], - [ - "gene_synonym", - "EcoGene:EG11110" - ], - [ - "gene_synonym", - "NP_415264.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8Z3" - ], - [ - "gene_synonym", - "ybgC" - ], - [ - "gene_synonym", - "b0736" - ], - [ - "gene_synonym", - "GI:16128711" - ], - [ - "gene_synonym", - "ASAP:ABE-0002508" - ] - ], - "dna_sequence": "GTGAATACAACGCTGTTTCGATGGCCGGTTCGCGTCTACTATGAAGATACCGATGCCGGTGGTGTGGTGTACCACGCCAGTTACGTCGCTTTTTATGAAAGAGCACGCACAGAGATGCTGCGTCATCATCACTTCAGTCAGCAGGCGCTGATGGCTGAACGCGTTGCCTTTGTGGTACGTAAAATGACGGTGGAATATTACGCACCTGCGCGGCTCGACGATATGCTCGAAATACAGACTGAAATAACATCAATGCGTGGCACCTCTTTGGTTTTCACGCAACGTATTGTCAACGCCGAGAATACTTTGCTGAATGAAGCAGAGGTTCTGGTTGTTTGCGTTGACCCACTCAAAATGAAGCCTCGTGCGCTTCCCAAGTCTATTGTCGCGGAGTTTAAGCAGTGA", - "dna_sequence_length": 405, - "functions": [ - "acyl-CoA thioester hydrolase" - ], - "id": "CDS_725", - "location": [ - [ - "NC_000913", - 774752, - "+", - 405 - ] - ], - "md5": "77ba748981e16db2bb34e857151cf51c", - "parent_gene": "", - "protein_md5": "ecdb1c0c5b5d60d6db0a714840aed4ee", - "protein_translation": "MNTTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVNAENTLLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ", - "protein_translation_length": 134, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0727" - ], - [ - "gene_synonym", - "NP_415265.1" - ], - [ - "gene_synonym", - "ECK0726" - ], - [ - "gene_synonym", - "tolQ" - ], - [ - "gene_synonym", - "tolP" - ], - [ - "gene_synonym", - "GeneID:948900" - ], - [ - "gene_synonym", - "EcoGene:EG11010" - ], - [ - "gene_synonym", - "ASAP:ABE-0002511" - ], - [ - "gene_synonym", - "b0737" - ], - [ - "gene_synonym", - "fii" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABU9" - ], - [ - "gene_synonym", - "GI:16128712" - ] - ], - "dna_sequence": "GTGACTGACATGAATATCCTTGATTTGTTCCTGAAGGCTAGCCTTCTGGTTAAACTTATCATGTTGATTTTGATTGGTTTTTCAATCGCATCTTGGGCCATTATTATCCAGCGGACCCGTATTCTTAACGCAGCGGCGCGCGAAGCCGAAGCGTTTGAAGATAAATTCTGGTCTGGAATCGAACTCTCTCGCCTCTATCAAGAGAGCCAGGGGAAACGGGATAATCTGACTGGTTCGGAACAAATCTTTTACAGCGGGTTCAAAGAGTTTGTGCGCCTGCATCGTGCCAATAGCCATGCGCCGGAAGCCGTAGTGGAAGGGGCGTCGCGTGCTATGCGTATCTCCATGAACCGTGAACTTGAAAATCTGGAAACGCACATTCCGTTCCTCGGTACGGTTGGCTCCATCAGCCCGTATATTGGTCTGTTTGGTACGGTCTGGGGGATCATGCACGCCTTTATCGCCCTCGGGGCGGTAAAACAAGCAACACTGCAAATGGTTGCGCCCGGTATCGCAGAAGCGTTGATTGCGACTGCAATTGGTCTGTTTGCCGCTATCCCGGCAGTTATGGCCTACAACCGCCTCAACCAGCGCGTAAACAAACTGGAACTGAATTACGACAACTTTATGGAAGAGTTTACCGCGATTCTGCACCGCCAGGCGTTTACCGTTAGCGAGAGCAACAAGGGGTAA", - "dna_sequence_length": 693, - "functions": [ - "membrane spanning protein in TolA-TolQ-TolR complex" - ], - "id": "CDS_726", - "location": [ - [ - "NC_000913", - 775153, - "+", - 693 - ] - ], - "md5": "c9831e456cafa21cf8b6321deda8dd36", - "parent_gene": "", - "protein_md5": "92201b01b3e071e67ec2380a4f04f42d", - "protein_translation": "MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNAAAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPEAVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILHRQAFTVSESNKG", - "protein_translation_length": 230, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0727" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABV6" - ], - [ - "gene_synonym", - "tolR" - ], - [ - "gene_synonym", - "JW0728" - ], - [ - "gene_synonym", - "EcoGene:EG11011" - ], - [ - "gene_synonym", - "GeneID:945328" - ], - [ - "gene_synonym", - "ASAP:ABE-0002513" - ], - [ - "gene_synonym", - "b0738" - ], - [ - "gene_synonym", - "NP_415266.1" - ], - [ - "gene_synonym", - "GI:16128713" - ] - ], - "dna_sequence": "ATGGCCAGAGCGCGTGGACGAGGTCGTCGCGATCTCAAGTCCGAAATCAACATTGTACCGTTGCTGGACGTACTGCTGGTGCTGTTGCTGATCTTTATGGCGACAGCGCCCATCATCACCCAGAGCGTGGAGGTCGATCTGCCAGACGCTACTGAATCACAGGCGGTGAGCAGTAACGATAATCCGCCAGTGATTGTTGAAGTGTCTGGTATTGGTCAGTACACCGTGGTGGTTGAGAAAGATCGCCTGGAGCGTTTACCACCAGAGCAGGTGGTGGCGGAAGTGTCCAGCCGTTTCAAGGCCAACCCGAAAACGGTCTTTCTGATCGGTGGCGCAAAAGATGTGCCTTACGATGAAATAATTAAAGCACTGAACTTGTTACATAGTGCGGGTGTGAAATCGGTTGGTTTAATGACGCAGCCTATCTAA", - "dna_sequence_length": 429, - "functions": [ - "membrane spanning protein in TolA-TolQ-TolR complex" - ], - "id": "CDS_727", - "location": [ - [ - "NC_000913", - 775849, - "+", - 429 - ] - ], - "md5": "b53384577a13f7549cab7ec29f913311", - "parent_gene": "", - "protein_md5": "029ef8d31b6e4eba21b7bb703a4276ae", - "protein_translation": "MARARGRGRRDLKSEINIVPLLDVLLVLLLIFMATAPIITQSVEVDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKANPKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI", - "protein_translation_length": 142, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0728" - ], - [ - "gene_synonym", - "GeneID:946625" - ], - [ - "gene_synonym", - "cim" - ], - [ - "gene_synonym", - "JW0729" - ], - [ - "gene_synonym", - "NP_415267.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002515" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P19934" - ], - [ - "gene_synonym", - "EcoGene:EG11007" - ], - [ - "gene_synonym", - "excC" - ], - [ - "gene_synonym", - "lky" - ], - [ - "gene_synonym", - "b0739" - ], - [ - "gene_synonym", - "GI:16128714" - ], - [ - "gene_synonym", - "tolA" - ] - ], - "dna_sequence": "GTGTCAAAGGCAACCGAACAAAACGACAAGCTCAAGCGGGCGATAATTATTTCAGCAGTGCTGCATGTCATCTTATTTGCGGCGCTGATCTGGAGTTCGTTCGATGAGAATATAGAAGCTTCAGCCGGAGGCGGCGGTGGTTCGTCCATCGACGCTGTCATGGTTGATTCAGGTGCGGTAGTTGAGCAGTACAAACGCATGCAAAGCCAGGAATCAAGCGCGAAGCGTTCTGATGAACAGCGCAAGATGAAGGAACAGCAGGCTGCTGAAGAACTGCGTGAGAAACAAGCGGCTGAACAGGAACGCCTGAAGCAACTTGAGAAAGAGCGGTTAGCGGCTCAGGAGCAGAAAAAGCAGGCTGAAGAAGCCGCAAAACAGGCCGAGTTAAAGCAGAAGCAAGCTGAAGAGGCGGCAGCGAAAGCGGCGGCAGATGCTAAAGCGAAGGCCGAAGCAGATGCTAAAGCTGCGGAAGAAGCAGCGAAGAAAGCGGCTGCAGACGCAAAGAAAAAAGCAGAAGCAGAAGCCGCCAAAGCCGCAGCCGAAGCGCAGAAAAAAGCCGAGGCAGCCGCTGCGGCACTGAAGAAGAAAGCGGAAGCGGCAGAAGCAGCTGCAGCTGAAGCAAGAAAGAAAGCGGCAACTGAAGCTGCTGAAAAAGCCAAAGCAGAAGCTGAGAAGAAAGCGGCTGCTGAAAAGGCTGCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGCAGCGGCAAAAGCTGCAGCTGAAAAAGCCGCTGCAGCAAAAGCGGCCGCAGAGGCAGATGATATTTTCGGTGAGCTAAGCTCTGGTAAGAATGCACCGAAAACGGGGGGAGGGGCGAAAGGGAACAATGCTTCGCCTGCCGGGAGTGGTAATACTAAAAACAATGGCGCATCAGGGGCCGATATCAATAACTATGCCGGGCAGATTAAATCTGCTATCGAAAGTAAGTTCTATGACGCATCGTCCTATGCAGGCAAAACCTGTACGCTGCGCATAAAACTGGCACCCGATGGTATGTTACTGGATATCAAACCTGAAGGTGGCGATCCCGCACTTTGTCAGGCTGCGTTGGCAGCAGCTAAACTTGCGAAGATCCCGAAACCACCAAGCCAGGCAGTATATGAAGTGTTCAAAAACGCGCCATTGGACTTCAAACCGTAA", 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- ], - [ - "gene_synonym", - "JW5100" - ], - [ - "gene_synonym", - "GI:16128715" - ], - [ - "gene_synonym", - "tolB" - ], - [ - "gene_synonym", - "EcoGene:EG11008" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A855" - ], - [ - "gene_synonym", - "ASAP:ABE-0002517" - ] - ], - "dna_sequence": "ATGAAGCAGGCATTACGAGTAGCATTTGGTTTTCTCATACTGTGGGCATCAGTTCTGCATGCTGAAGTCCGCATTGTGATCGACAGCGGTGTAGATTCCGGTCGTCCTATTGGTGTTGTTCCTTTCCAGTGGGCGGGGCCTGGTGCGGCACCTGAAGATATTGGCGGCATCGTTGCTGCTGACTTGCGTAACAGCGGTAAATTTAATCCGTTAGATCGCGCTCGTCTGCCACAGCAGCCGGGTAGTGCGCAGGAAGTACAACCAGCTGCATGGTCCGCACTGGGCATTGACGCTGTAGTTGTCGGTCAGGTCACTCCGAATCCGGATGGTTCTTACAATGTTGCTTATCAACTTGTTGACACTGGCGGCGCACCGGGTACTGTACTTGCTCAGAACTCGTACAAAGTGAACAAGCAGTGGCTGCGTTATGCTGGTCATACCGCCAGTGATGAAGTGTTTGAAAAACTGACCGGCATTAAAGGTGCGTTCCGTACTCGTATTGCCTACGTTGTTCAGACCAACGGCGGTCAGTTCCCGTATGAACTGCGCGTATCTGACTATGACGGTTACAACCAGTTTGTCGTTCACCGTTCACCGCAGCCGCTGATGTCTCCGGCGTGGTCACCAGACGGTTCTAAACTGGCTTATGTGACCTTCGAAAGCGGTCGTTCCGCGCTGGTTATTCAGACGCTGGCAAATGGCGCTGTACGTCAGGTGGCTTCATTCCCGCGTCACAACGGTGCACCTGCATTCTCGCCAGACGGCAGCAAACTGGCATTCGCCTTGTCGAAAACCGGTAGTCTGAACCTGTACGTAATGGATTTGGCTTCTGGTCAGATCCGCCAGGTGACTGATGGTCGCAGTAACAATACCGAACCGACCTGGTTCCCGGATAGCCAGAACCTGGCATTTACTTCTGACCAGGCCGGTCGTCCGCAGGTTTATAAAGTGAATATCAACGGCGGTGCGCCACAACGTATTACCTGGGAAGGTTCGCAGAACCAGGATGCGGATGTCAGCAGCGACGGTAAATTTATGGTAATGGTCAGCTCCAATGGTGGGCAGCAGCACATTGCCAAACAAGATCTGGCAACGGGAGGCGTACAAGTTCTGTCGTCCACGTTCCTGGATGAAACGCCAAGTCTGGCACCTAACGGCACTATGGTAATCTACAGCTCTTCTCAGGGGATGGGATCCGTGCTGAATTTGGTTTCTACAGATGGGCGTTTCAAAGCGCGTCTTCCGGCAACTGATGGACAGGTCAAATTCCCTGCCTGGTCGCCGTATCTGTGA", 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"UniProtKB/Swiss-Prot:P0A912" - ], - [ - "gene_synonym", - "ECK0730" - ], - [ - "gene_synonym", - "GeneID:945004" - ], - [ - "gene_synonym", - "b0741" - ], - [ - "gene_synonym", - "NP_415269.1" - ], - [ - "gene_synonym", - "GI:16128716" - ], - [ - "gene_synonym", - "pal" - ], - [ - "gene_synonym", - "excC" - ] - ], - "dna_sequence": "ATGCAACTGAACAAAGTGCTGAAAGGGCTGATGATTGCTCTGCCTGTTATGGCAATTGCGGCATGTTCTTCCAACAAGAACGCCAGCAATGACGGCAGCGAAGGCATGCTGGGTGCCGGCACTGGTATGGATGCGAACGGCGGCAACGGCAACATGTCTTCCGAAGAGCAGGCTCGTCTGCAAATGCAACAGCTGCAGCAGAACAACATCGTTTACTTCGATCTGGACAAGTACGATATCCGTTCTGACTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGTGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGACCAGATCTCCATCGTTTCTTACGGTAAAGAAAAACCTGCAGTACTGGGTCATGACGAAGCGGCATACTCCAAAAACCGTCGTGCGGTACTGGTTTACTAA", - "dna_sequence_length": 522, - "functions": [ - "peptidoglycan-associated outer membrane lipoprotein" - ], - "id": "CDS_730", - "location": [ - [ - "NC_000913", - 779067, - "+", - 522 - ] - ], - "md5": "f47ba033cc74f2115c27c6b54ad32d87", - "parent_gene": "", - "protein_md5": "90744e2fc74900a7418e43396073931e", - "protein_translation": "MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGGNGNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLVY", - "protein_translation_length": 173, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45955" - ], - [ - "gene_synonym", - "ybgF" - ], - [ - "gene_synonym", - "JW0732" - ], - [ - "gene_synonym", - "EcoGene:EG12854" - ], - [ - "gene_synonym", - "ECK0731" - ], - [ - "gene_synonym", - "b0742" - ], - [ - "gene_synonym", - "GI:16128717" - ], - [ - "gene_synonym", - "NP_415270.1" - ], - [ - "gene_synonym", - "GeneID:947227" - ], - [ - "gene_synonym", - "ASAP:ABE-0002523" - ] - ], - "dna_sequence": "ATGAGCAGTAACTTCAGACATCAACTATTGAGTCTGTCGTTACTGGTTGGTATAGCGGCCCCCTGGGCCGCTTTTGCTCAGGCACCAATCAGTAGTGTCGGCTCAGGCTCGGTCGAAGACCGCGTCACTCAACTTGAGCGTATTTCTAATGCTCACAGCCAGCTTTTAACCCAACTCCAGCAACAACTTTCTGATAATCAATCCGATATTGATTCCCTGCGTGGTCAGATTCAGGAAAATCAGTATCAACTGAATCAGGTCGTGGAGCGGCAAAAGCAGATCCTGTTGCAGATCGACAGCCTCAGCAGCGGTGGTGCAGCGGCGCAATCAACCAGCGGCGATCAAAGCGGTGCGGCGGCATCAACGACGCCGACAGCTGATGCTGGTACTGCGAATGCTGGCGCGCCGGTGAAAAGCGGTAATGCAAACACGGATTACAATGCAGCTATTGCGCTGGTGCAGGATAAATCCCGCCAGGATGACGCAATGGTGGCATTTCAGAATTTCATCAAAAATTACCCTGATTCAACTTACCTGCCAAACGCCAATTATTGGCTGGGTCAGTTAAACTACAACAAGGGTAAAAAAGATGATGCGGCGTACTATTTTGCTTCGGTAGTGAAAAACTATCCGAAGTCACCAAAGGCTGCAGATGCGATGTTTAAAGTCGGCGTCATCATGCAGGACAAAGGTGACACCGCAAAAGCGAAAGCCGTATACCAGCAGGTTATCAGTAAATACCCTGGTACTGATGGCGCTAAACAGGCACAAAAACGTCTGAACGCGATGTAA", - "dna_sequence_length": 792, - "functions": [ - "periplasmic TolA-binding protein" - ], - "id": "CDS_731", - "location": [ - [ - "NC_000913", - 779598, - "+", - 792 - ] - ], - "md5": "b451e60394173f84e4bc62a21413be06", - "parent_gene": "", - "protein_md5": "624185469356318cd3fed6830db6d92a", - "protein_translation": "MSSNFRHQLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQLERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLSSGGAAAQSTSGDQSGAAASTTPTADAGTANAGAPVKSGNANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM", - "protein_translation_length": 263, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11458" - ], - [ - "gene_synonym", - "JW0733" - ], - [ - "gene_synonym", - "ECK0739" - ], - [ - "gene_synonym", - "nadA" - ], - [ - "gene_synonym", - "b0750" - ], - [ - "gene_synonym", - "GI:16128718" - ], - [ - "gene_synonym", - "GeneID:945351" - ], - [ - "gene_synonym", - "EcoGene:EG10630" - ], - [ - "gene_synonym", - "NP_415271.1" - ], - [ - "gene_synonym", - "nicA" - ], - [ - "gene_synonym", - "ASAP:ABE-0002541" - ] - ], - "dna_sequence": "ATGAGCGTAATGTTTGATCCAGACACGGCGATTTATCCTTTCCCCCCGAAGCCGACGCCGTTAAGCATTGATGAAAAAGCGTATTACCGCGAGAAGATAAAACGTCTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTGAGATTTATGGGAGAAACCGCCAAAATTCTCAGTCCGGAAAAAACAATTCTGATGCCGACACTTCAGGCTGAATGTTCACTGGATCTCGGCTGCCCTGTTGAAGAATTTAACGCATTTTGCGATGCCCATCCCGATCGTACTGTCGTCGTCTACGCCAACACTTCTGCTGCGGTAAAAGCGCGCGCAGATTGGGTGGTAACTTCAAGCATTGCCGTCGAACTTATTGATCATCTTGATAGTTTGGGTGAAAAAATCATCTGGGCACCCGACAAACATCTGGGGCGTTACGTGCAAAAACAGACGGGTGGAGACATTCTATGCTGGCAGGGTGCCTGTATTGTGCATGATGAATTTAAGACTCAGGCGTTAACCCGCTTGCAAGAAGAATACCCGGATGCTGCCATACTGGTGCATCCAGAATCACCACAAGCTATTGTCGATATGGCGGATGCGGTCGGTTCCACCAGTCAACTGATCGCTGCTGCGAAAACATTGCCACATCAGAGGCTTATTGTGGCAACCGATCGGGGTATTTTCTACAAAATGCAGCAGGCGGTGCCAGATAAAGAGTTACTGGAAGCACCAACCGCAGGTGAGGGTGCAACCTGCCGCAGCTGCGCGCATTGTCCGTGGATGGCCATGAATGGCCTTCAGGCCATCGCAGAGGCATTAGAACAGGAAGGAAGCAATCACGAGGTTCATGTTGATGAAAGGCTGCGAGAGAGGGCGCTGGTGCCGCTCAATCGTATGCTGGATTTTGCGGCTACACTACGTGGATAA", 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"gene_synonym", - "GeneID:945350" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFK2" - ], - [ - "gene_synonym", - "EcoGene:EG11700" - ], - [ - "gene_synonym", - "b0751" - ] - ], - "dna_sequence": "ATGGATTTTTTTAGTGTGCAGAATATCCTGGTACATATACCAATAGGGGCAGGCGGTTATGATCTCTCATGGATCGAAGCGGTAGGCACGATCGCCGGGTTGCTGTGTATTGGCCTTGCCAGTCTGGAGAAGATCAGCAACTACTTCTTTGGCCTGATCAACGTCACCTTGTTTGGCATTATTTTCTTTCAGATTCAGCTGTATGCCAGCCTGCTATTACAGGTGTTTTTCTTTGCCGCGAATATTTACGGTTGGTATGCGTGGTCGCGACAAACCAGTCAGAACGAGGCGGAGTTGAAAATTCGCTGGTTGCCATTGCCGAAGGCACTCAGCTGGTTGGCGGTTTGCGTTGTTTCGATTGGTCTGATGACGGTATTTATCAATCCGGTGTTTGCATTTTTGACCCGCGTGGCAGTCATGATCATGCAAGCATTAGGATTACAGGTTGTGATGCCTGAACTGCAACCGGACGCTTTCCCGTTCTGGGATTCATGCATGATGGTGTTATCTATCGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCACGTGAAAGAGGCTCACGCGCGCTGTCCCATTAA", - "dna_sequence_length": 720, - "functions": [ - "nicotinamide riboside transporter" - ], - "id": "CDS_733", - "location": [ - [ - "NC_000913", - 783166, - "+", - 720 - ] - ], - "md5": "af48a354bda491a6a249fa98e21ed9fb", - "parent_gene": "", - "protein_md5": "7dac8f6d27e12e2898c7091e01d2900f", - "protein_translation": "MDFFSVQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEKISNYFFGLINVTLFGIIFFQIQLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIRWLPLPKALSWLAVCVVSIGLMTVFINPVFAFLTRVAVMIMQALGLQVVMPELQPDAFPFWDSCMMVLSIVAMILMTRKYVENWLLWVIINVISVVIFALQGVYAMSLEYIILTFIALNGSRMWINSARERGSRALSH", - "protein_translation_length": 239, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0735" - ], - [ - "gene_synonym", - "ybgR" - ], - [ - "gene_synonym", - "zitB" - ], - [ - "gene_synonym", - "b0752" - ], - [ - "gene_synonym", - "ECK0741" - ], - [ - "gene_synonym", - "NP_415273.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75757" - ], - [ - "gene_synonym", - "ASAP:ABE-0002549" - ], - [ - "gene_synonym", - "GeneID:945348" - ], - [ - "gene_synonym", - "EcoGene:EG13662" - ], - [ - "gene_synonym", - "GI:16128720" - ] - ], - "dna_sequence": "ATGGCGCACTCACACTCACACACGTCCTCACACCTGCCAGAAGATAATAATGCTCGTCGCTTGTTGTATGCTTTCGGCGTGACTGCCGGGTTTATGCTGGTAGAAGTCGTTGGTGGTTTTCTTTCTGGTTCTCTGGCATTGCTGGCCGATGCGGGTCATATGTTGACCGATACTGCCGCCCTGCTTTTCGCCCTACTCGCCGTGCAATTTTCACGTCGTCCTCCCACCATTCGCCACACTTTCGGTTGGCTAAGACTGACCACGCTCGCGGCGTTTGTGAATGCCATAGCCCTCGTGGTAATTACCATTTTGATTGTCTGGGAGGCGATAGAACGCTTCCGCACGCCGCGTCCGGTCGAGGGCGGCATGATGATGGCAATTGCCGTGGCTGGGTTGCTGGCAAATATACTTTCTTTCTGGTTACTTCATCACGGCAGCGAAGAGAAAAACCTCAACGTACGAGCAGCGGCACTGCATGTGCTCGGGGACCTGCTGGGTTCGGTTGGGGCTATTATTGCCGCGTTGATTATTATCTGGACTGGCTGGACACCTGCTGACCCCATTCTCTCGATACTGGTGTCGCTTCTGGTTCTGCGTAGCGCGTGGCGACTGTTGAAAGATAGCGTGAATGAATTACTTGAAGGTGCACCGGTATCGCTGGATATCGCTGAACTGAAGCGTCGTATGTGCCGGGAAATCCCGGAAGTCCGCAATGTGCACCATGTACATGTATGGATGGTAGGCGAGAAGCCGGTGATGACGTTGCATGTGCAGGTGATCCCGCCACACGATCACGATGCCTTGTTGGATCAGATCCAACACTACCTGATGGATCACTATCAGATTGAGCACGCCACCATTCAGATGGAATATCAACCTTGTCATGGGCCAGACTGCCACCTGAATGAAGGGGTGTCTGGCCATTCACATCATCACCATTAA", - "dna_sequence_length": 942, - "functions": [ - "zinc efflux system" - ], - "id": "CDS_734", - "location": [ - [ - "NC_000913", - 784823, - "-", - 942 - ] - ], - "md5": "05157272ea5a057d4f2a9da7b0983a95", - "parent_gene": "", - "protein_md5": "9ed734d2db599900373bfc93276f57e3", - "protein_translation": "MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGSLALLADAGHMLTDTAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVITILIVWEAIERFRTPRPVEGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHVLGDLLGSVGAIIAALIIIWTGWTPADPILSILVSLLVLRSAWRLLKDSVNELLEGAPVSLDIAELKRRMCREIPEVRNVHHVHVWMVGEKPVMTLHVQVIPPHDHDALLDQIQHYLMDHYQIEHATIQMEYQPCHGPDCHLNEGVSGHSHHHH", - "protein_translation_length": 313, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0736" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAV6" - ], - [ - "gene_synonym", - "b0753" - ], - [ - "gene_synonym", - "ECK0742" - ], - [ - "gene_synonym", - "ASAP:ABE-0002553" - ], - [ - "gene_synonym", - "NP_415274.1" - ], - [ - "gene_synonym", - "GeneID:945356" - ], - [ - "gene_synonym", - "EcoGene:EG13663" - ], - [ - "gene_synonym", - "ybgS" - ], - [ - "gene_synonym", - "GI:16128721" - ] - ], - "dna_sequence": "ATGAAAATGACAAAACTGGCCACATTATTTCTGACTGCCACTCTAAGCCTTGCCAGCGGTGCCGCACTGGCTGCCGATAGCGGAGCGCAAACTAATAACGGCCAGGCAAACGCCGCAGCTGATGCGGGCCAGGTAGCCCCTGACGCCCGTGAAAATGTCGCGCCAAATAACGTCGACAATAACGGGGTAAATACCGGTTCTGGCGGCACAATGCTGCATTCGGATGGTTCTTCAATGAACAATGACGGAATGACCAAAGATGAAGAGCACAAGAACACCATGTGCAAAGATGGTCGCTGTCCGGATATCAATAAAAAGGTACAAACCGGTGATGGCATCAATAATGATGTCGATACCAAAACCGACGGTACCACGCAGTAA", - "dna_sequence_length": 381, - "functions": [ - "putative periplasmic protein" - ], - "id": "CDS_735", - "location": [ - [ - "NC_000913", - 785317, - "-", - 381 - ] - ], - "md5": "4aa39383edf8fedae79bb2424715a3a9", - "parent_gene": "", - "protein_md5": "a649cce1bf695fe53eecc47f52985976", - "protein_translation": "MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAAADAGQVAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPDINKKVQTGDGINNDVDTKTDGTTQ", - "protein_translation_length": 126, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0737" - ], - [ - "gene_synonym", - "GeneID:945605" - ], - [ - "gene_synonym", - "ECK0743" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB91" - ], - [ - "gene_synonym", - "b0754" - ], - [ - "gene_synonym", - "ASAP:ABE-0002560" - ], - [ - "gene_synonym", - "EcoGene:EG10079" - ], - [ - "gene_synonym", - "aroG" - ], - [ - "gene_synonym", - "GI:16128722" - ], - [ - "gene_synonym", - "NP_415275.1" - ] - ], - "dna_sequence": "ATGAATTATCAGAACGACGATTTACGCATCAAAGAAATCAAAGAGTTACTTCCTCCTGTCGCATTGCTGGAAAAATTCCCCGCTACTGAAAATGCCGCGAATACGGTTGCCCATGCCCGAAAAGCGATCCATAAGATCCTGAAAGGTAATGATGATCGCCTGTTGGTTGTGATTGGCCCATGCTCAATTCATGATCCTGTCGCGGCAAAAGAGTATGCCACTCGCTTGCTGGCGCTGCGTGAAGAGCTGAAAGATGAGCTGGAAATCGTAATGCGCGTCTATTTTGAAAAGCCGCGTACCACGGTGGGCTGGAAAGGGCTGATTAACGATCCGCATATGGATAATAGCTTCCAGATCAACGACGGTCTGCGTATAGCCCGTAAATTGCTGCTTGATATTAACGACAGCGGTCTGCCAGCGGCAGGTGAGTTTCTCGATATGATCACCCCACAATATCTCGCTGACCTGATGAGCTGGGGCGCAATTGGCGCACGTACCACCGAATCGCAGGTGCACCGCGAACTGGCATCAGGGCTTTCTTGTCCGGTCGGCTTCAAAAATGGCACCGACGGTACGATTAAAGTGGCTATCGATGCCATTAATGCCGCCGGTGCGCCGCACTGCTTCCTGTCCGTAACGAAATGGGGGCATTCGGCGATTGTGAATACCAGCGGTAACGGCGATTGCCATATCATTCTGCGCGGCGGTAAAGAGCCTAACTACAGCGCGAAGCACGTTGCTGAAGTGAAAGAAGGGCTGAACAAAGCAGGCCTGCCAGCACAGGTGATGATCGATTTCAGCCATGCTAACTCGTCCAAACAATTCAAAAAGCAGATGGATGTTTGTGCTGACGTTTGCCAGCAGATTGCCGGTGGCGAAAAGGCCATTATTGGCGTGATGGTGGAAAGCCATCTGGTGGAAGGCAATCAGAGCCTCGAGAGCGGGGAGCCGCTGGCCTACGGTAAGAGCATCACCGATGCCTGCATCGGCTGGGAAGATACCGATGCTCTGTTACGTCAACTGGCGAATGCAGTAAAAGCGCGTCGCGGGTAA", - "dna_sequence_length": 1053, - "functions": [ - "3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible" - ], - "id": "CDS_736", - "location": [ - [ - "NC_000913", - 785633, - "+", - 1053 - ] - ], - "md5": "e49d3c50828c2a84613f30ef26db1bc4", - "parent_gene": "", - "protein_md5": "8b4efabd0c5b0f60af7efd20fd31a750", - "protein_translation": "MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDTDALLRQLANAVKARRG", - "protein_translation_length": 350, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "gpm" - ], - [ - "gene_synonym", - "NP_415276.1" - ], - [ - "gene_synonym", - "gpmA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P62707" - ], - [ - "gene_synonym", - "JW0738" - ], - [ - "gene_synonym", - "b0755" - ], - [ - "gene_synonym", - "ECK0744" - ], - [ - "gene_synonym", - "ASAP:ABE-0002563" - ], - [ - "gene_synonym", - "EcoGene:EG11699" - ], - [ - "gene_synonym", - "GI:16128723" - ], - [ - "gene_synonym", - "GeneID:945068" - ] - ], - "dna_sequence": "ATGGCTGTAACTAAGCTGGTTCTGGTTCGTCATGGCGAAAGTCAGTGGAACAAAGAAAACCGTTTCACCGGTTGGTACGACGTGGATCTGTCTGAGAAAGGCGTAAGCGAAGCAAAAGCAGCAGGTAAGCTGCTGAAAGAGGAAGGTTACAGCTTTGACTTTGCTTACACTTCTGTGCTGAAACGCGCTATCCATACCCTGTGGAATGTGCTGGACGAACTGGATCAGGCATGGCTGCCCGTTGAGAAATCCTGGAAACTGAACGAACGTCACTACGGTGCGTTGCAGGGTCTGAACAAAGCGGAAACTGCTGAAAAGTATGGCGACGAGCAGGTGAAACAGTGGCGTCGTGGTTTTGCAGTGACTCCGCCGGAACTGACTAAAGATGATGAGCGTTATCCGGGTCACGATCCGCGTTACGCGAAACTGAGCGAGAAAGAACTGCCGCTGACGGAAAGCCTGGCGCTGACCATTGACCGCGTGATCCCTTACTGGAATGAAACTATTCTGCCGCGTATGAAGAGCGGTGAGCGCGTGATCATCGCTGCACACGGTAACTCTTTACGTGCGCTGGTGAAATATCTTGATAACATGAGCGAAGAAGAGATTCTTGAGCTTAATATCCCGACTGGCGTGCCGCTGGTGTATGAGTTCGACGAGAATTTCAAACCGCTGAAACGCTATTATCTGGGTAATGCTGACGAGATCGCAGCGAAAGCAGCGGCGGTTGCAAACCAGGGTAAAGCGAAGTAA", - "dna_sequence_length": 753, - "functions": [ - "phosphoglyceromutase 1" - ], - "id": "CDS_737", - "location": [ - [ - "NC_000913", - 787595, - "-", - 753 - ] - ], - "md5": "053ad48aa5174ad090296fc8a3bb15bb", - "parent_gene": "", - "protein_md5": "b44f939266db7350d7326798f5f7f138", - "protein_translation": "MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDENFKPLKRYYLGNADEIAAKAAAVANQGKAK", - "protein_translation_length": 250, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0739" - ], - [ - "gene_synonym", - "b0756" - ], - [ - "gene_synonym", - "ECK0745" - ], - [ - "gene_synonym", - "NP_415277.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9C3" - ], - [ - "gene_synonym", - "EcoGene:EG11698" - ], - [ - "gene_synonym", - "GeneID:944943" - ], - [ - "gene_synonym", - "ASAP:ABE-0002566" - ], - [ - "gene_synonym", - "galM" - ], - [ - "gene_synonym", - "GI:16128724" - ] - ], - "dna_sequence": "GTGCTGAACGAAACTCCCGCACTGGCACCCGATGGTCAGCCGTACCGACTGTTAACTTTGCGTAACAACGCAGGGATGGTAGTCACGCTGATGGACTGGGGTGCGACTTTACTTTCCGCCCGTATTCCGCTTTCCGATGGCAGCGTCCGCGAGGCGCTGCTCGGCTGTGCCAGCCCGGAATGCTATCAGGATCAGGCCGCGTTTCTGGGGGCCTCTATTGGTCGTTATGCCAACCGTATCGCCAATAGCCGTTATACCTTTGACGGTGAAACCGTGACGCTTTCGCCAAGTCAGGGCGTTAACCAGCTGCACGGCGGGCCGGAAGGGTTCGACAAACGTCGCTGGCAGATTGTGAACCAGAACGATCGTCAGGTGCTGTTTGCCCTGAGTTCAGATGATGGTGATCAGGGCTTCCCGGGTAATCTCGGCGCGACGGTGCAATATCGTCTGACCGACGATAACCGTATCTCCATTACTTATCGCGCCACAGTTGATAAACCTTGCCCGGTGAATATGACTAATCACGTCTATTTCAATCTTGACGGCGAGCAGTCTGACGTGCGCAATCACAAGTTGCAGATTCTGGCGGACGAATATCTGCCGGTTGATGAAGGCGGCATTCCGCACGACGGCCTGAAATCTGTCGCCGGAACGTCTTTTGATTTCCGCAGCGCCAAAATCATCGCCAGTGAGTTTCTTGCCGACGACGATCAGCGCAAAGTGAAAGGTTACGATCACGCATTCTTGTTACAGGCCAAAGGCGATGGCAAGAAAGTGGCGGCGCATGTCTGGTCAGCAGATGAAAAATTGCAGCTGAAGGTCTACACCACCGCTCCGGCTCTGCAATTCTACTCCGGCAACTTCCTCGGCGGCACACCGTCGCGGGGAACCGAACCTTACGCCGACTGGCAAGGGCTGGCTCTGGAAAGCGAGTTTCTACCGGACAGCCCGAACCACCCTGAATGGCCGCAACCGGACTGCTTCCTGCGTCCTGGCGAAGAGTATTCCAGCCTGACGGAATATCAGTTTATTGCTGAGTAA", - "dna_sequence_length": 1041, - "functions": [ - "aldose 1-epimerase", - "type-1 mutarotase", - "galactose mutarotase" - ], - "id": "CDS_738", - "location": [ - [ - "NC_000913", - 788837, - "-", - 1041 - ] - ], - "md5": "45583aa92ae3b98237b77cb5fbb2b13d", - "parent_gene": "", - "protein_md5": "3651de6c148701483bd8963d04a47b07", - "protein_translation": "MLNETPALAPDGQPYRLLTLRNNAGMVVTLMDWGATLLSARIPLSDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQNDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITYRATVDKPCPVNMTNHVYFNLDGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVAGTSFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAAHVWSADEKLQLKVYTTAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPEWPQPDCFLRPGEEYSSLTEYQFIAE", - "protein_translation_length": 346, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415278.1" - ], - [ - "gene_synonym", - "b0757" - ], - [ - "gene_synonym", - "ECK0746" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6T3" - ], - [ - "gene_synonym", - "JW0740" - ], - [ - "gene_synonym", - "galA" - ], - [ - "gene_synonym", - "ASAP:ABE-0002568" - ], - [ - "gene_synonym", - "EcoGene:EG10363" - ], - [ - "gene_synonym", - "GeneID:945358" - ], - [ - "gene_synonym", - "GI:16128725" - ], - [ - "gene_synonym", - "galK" - ] - ], - "dna_sequence": "ATGAGTCTGAAAGAAAAAACACAATCTCTGTTTGCCAACGCATTTGGCTACCCTGCCACTCACACCATTCAGGCGCCTGGCCGCGTGAATTTGATTGGTGAACACACCGACTACAACGACGGTTTCGTTCTGCCCTGCGCGATTGATTATCAAACCGTGATCAGTTGTGCACCACGCGATGACCGTAAAGTTCGCGTGATGGCAGCCGATTATGAAAATCAGCTCGACGAGTTTTCCCTCGATGCGCCCATTGTCGCACATGAAAACTATCAATGGGCTAACTACGTTCGTGGCGTGGTGAAACATCTGCAACTGCGTAACAACAGCTTCGGCGGCGTGGACATGGTGATCAGCGGCAATGTGCCGCAGGGTGCCGGGTTAAGTTCTTCCGCTTCACTGGAAGTCGCGGTCGGAACCGTATTGCAGCAGCTTTATCATCTGCCGCTGGACGGCGCACAAATCGCGCTTAACGGTCAGGAAGCAGAAAACCAGTTTGTAGGCTGTAACTGCGGGATCATGGATCAGCTAATTTCCGCGCTCGGCAAGAAAGATCATGCCTTGCTGATCGATTGCCGCTCACTGGGGACCAAAGCAGTTTCCATGCCCAAAGGTGTGGCTGTCGTCATCATCAACAGTAACTTCAAACGTACCCTGGTTGGCAGCGAATACAACACCCGTCGTGAACAGTGCGAAACCGGTGCGCGTTTCTTCCAGCAGCCAGCCCTGCGTGATGTCACCATTGAAGAGTTCAACGCTGTTGCGCATGAACTGGACCCGATCGTGGCAAAACGCGTGCGTCATATACTGACTGAAAACGCCCGCACCGTTGAAGCTGCCAGCGCGCTGGAGCAAGGCGACCTGAAACGTATGGGCGAGTTGATGGCGGAGTCTCATGCCTCTATGCGCGATGATTTCGAAATCACCGTGCCGCAAATTGACACTCTGGTAGAAATCGTCAAAGCTGTGATTGGCGACAAAGGTGGCGTACGCATGACCGGCGGCGGATTTGGCGGCTGTATCGTCGCGCTGATCCCGGAAGAGCTGGTGCCTGCCGTACAGCAAGCTGTCGCTGAACAATATGAAGCAAAAACAGGTATTAAAGAGACTTTTTACGTTTGTAAACCATCACAAGGAGCAGGACAGTGCTGA", - "dna_sequence_length": 1149, - "functions": [ - "galactokinase" - ], - "id": "CDS_739", - "location": [ - [ - "NC_000913", - 789979, - "-", - 1149 - ] - ], - "md5": "9f573a734e2509e3ad337259946b8f13", - "parent_gene": "", - "protein_md5": "c3a5104c676445d8933210aa5391f2f8", - "protein_translation": "MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRKVRVMAADYENQLDEFSLDAPIVAHENYQWANYVRGVVKHLQLRNNSFGGVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTLVGSEYNTRREQCETGARFFQQPALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTVEAASALEQGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKAVIGDKGGVRMTGGGFGGCIVALIPEELVPAVQQAVAEQYEAKTGIKETFYVCKPSQGAGQC", - "protein_translation_length": 382, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "galT" - ], - [ - "gene_synonym", - "NP_415279.1" - ], - [ - "gene_synonym", - "b0758" - ], - [ - "gene_synonym", - "ECK0747" - ], - [ - "gene_synonym", - "ASAP:ABE-0002573" - ], - [ - "gene_synonym", - "GeneID:945357" - ], - [ - "gene_synonym", - "JW0741" - ], - [ - "gene_synonym", - "galB" - ], - [ - "gene_synonym", - "EcoGene:EG10366" - ], - [ - "gene_synonym", - "GI:16128726" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09148" - ] - ], - "dna_sequence": "ATGACGCAATTTAATCCCGTTGATCATCCACATCGCCGCTACAACCCGCTCACCGGGCAATGGATTCTGGTTTCACCGCACCGCGCTAAGCGCCCCTGGCAGGGGGCGCAGGAAACGCCAGCCAAACAGGTGTTACCTGCGCACGATCCAGATTGCTTCCTCTGCGCAGGTAATGTGCGGGTGACAGGCGATAAAAACCCCGATTACACCGGGACTTACGTTTTCACTAATGACTTTGCGGCTTTGATGTCTGACACGCCAGATGCGCCAGAAAGTCACGATCCGCTGATGCGTTGCCAGAGCGCGCGCGGCACCAGCCGGGTGATCTGCTTTTCACCGGATCACAGTAAAACGCTGCCAGAGCTCAGCGTTGCAGCATTGACGGAAATCGTCAAAACCTGGCAGGAGCAAACCGCAGAACTGGGGAAAACGTACCCATGGGTGCAGGTTTTTGAAAACAAAGGCGCGGCGATGGGCTGCTCTAACCCGCATCCGCACGGTCAGATTTGGGCAAATAGCTTCCTGCCTAACGAAGCTGAGCGCGAAGACCGCCTGCAAAAAGAATATTTTGCCGAACAGAAATCACCAATGCTGGTGGATTATGTTCAGCGCGAGCTGGCAGACGGTAGCCGTACCGTTGTCGAAACCGAACACTGGTTAGCCGTCGTGCCTTACTGGGCTGCCTGGCCGTTCGAAACGCTACTGCTGCCCAAAGCCCACGTTTTACGGATCACCGATTTGACCGACGCCCAGCGCAGCGATCTGGCGCTGGCGTTGAAAAAGCTGACCAGTCGTTATGACAACCTCTTCCAGTGCTCCTTCCCCTACTCTATGGGCTGGCACGGCGCGCCATTTAATGGCGAAGAGAATCAACACTGGCAGCTGCACGCGCACTTTTATCCGCCTCTGCTGCGCTCCGCCACCGTACGTAAATTTATGGTTGGTTATGAAATGCTGGCAGAGACCCAGCGAGACCTGACCGCAGAACAGGCAGCAGAGCGTTTGCGCGCAGTCAGCGATATCCATTTTCGCGAATCCGGAGTGTAA", - "dna_sequence_length": 1047, - "functions": [ - "galactose-1-phosphate uridylyltransferase" - ], - "id": "CDS_740", - "location": [ - [ - "NC_000913", - 791029, - "-", - 1047 - ] - ], - "md5": "be8324c692f50e9a9d0ea550034e0b2b", - "parent_gene": "", - "protein_md5": "325cb7c5269d14c0d53593362b5dfad8", - "protein_translation": "MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQVLPAHDPDCFLCAGNVRVTGDKNPDYTGTYVFTNDFAALMSDTPDAPESHDPLMRCQSARGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGCSNPHPHGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEHWLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPYSMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAERLRAVSDIHFRESGV", - "protein_translation_length": 348, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09147" - ], - [ - "gene_synonym", - "b0759" - ], - [ - "gene_synonym", - "ECK0748" - ], - [ - "gene_synonym", - "NP_415280.3" - ], - [ - "gene_synonym", - "ASAP:ABE-0002575" - ], - [ - "gene_synonym", - "GI:49176045" - ], - [ - "gene_synonym", - "galD" - ], - [ - "gene_synonym", - "galE" - ], - [ - "gene_synonym", - "GeneID:945354" - ], - [ - "gene_synonym", - "JW0742" - ], - [ - "gene_synonym", - "EcoGene:EG10362" - ] - ], - "dna_sequence": "ATGAGAGTTCTGGTTACCGGTGGTAGCGGTTACATTGGAAGTCATACCTGTGTGCAATTACTGCAAAACGGTCATGATGTCATCATTCTTGATAACCTCTGTAACAGTAAGCGCAGCGTACTGCCTGTTATCGAGCGTTTAGGCGGCAAACATCCAACGTTTGTTGAAGGCGATATTCGTAACGAAGCGTTGATGACCGAGATCCTGCACGATCACGCTATCGACACCGTGATCCACTTCGCCGGGCTGAAAGCCGTGGGCGAATCGGTACAAAAACCGCTGGAATATTACGACAACAATGTCAACGGCACTCTGCGCCTGATTAGCGCCATGCGCGCCGCTAACGTCAAAAACTTTATTTTTAGCTCCTCCGCCACCGTTTATGGCGATCAGCCCAAAATTCCATACGTTGAAAGCTTCCCGACCGGCACACCGCAAAGCCCTTACGGCAAAAGCAAGCTGATGGTGGAACAGATCCTCACCGATCTGCAAAAAGCCCAGCCGGACTGGAGCATTGCCCTGCTGCGCTACTTCAACCCGGTTGGCGCGCATCCGTCGGGCGATATGGGCGAAGATCCGCAAGGCATTCCGAATAACCTGATGCCATACATCGCCCAGGTTGCTGTAGGCCGTCGCGACTCGCTGGCGATTTTTGGTAACGATTATCCGACCGAAGATGGTACTGGCGTACGCGATTACATCCACGTAATGGATCTGGCGGACGGTCACGTCGTGGCGATGGAAAAACTGGCGAACAAGCCAGGCGTACACATCTACAACCTCGGCGCTGGCGTAGGCAACAGCGTGCTGGACGTGGTTAATGCCTTCAGCAAAGCCTGCGGCAAACCGGTTAATTATCATTTTGCACCGCGTCGCGAGGGCGACCTTCCGGCCTACTGGGCGGACGCCAGCAAAGCCGACCGTGAACTGAACTGGCGCGTAACGCGCACACTCGATGAAATGGCGCAGGACACCTGGCACTGGCAGTCACGCCATCCACAGGGATATCCCGATTAA", - "dna_sequence_length": 1017, - "functions": [ - "UDP-galactose-4-epimerase" - ], - "id": "CDS_741", - "location": [ - [ - "NC_000913", - 792055, - "-", - 1017 - ] - ], - "md5": "7e3d6a38ca1d96b862feac115d82ca46", - "parent_gene": "", - "protein_md5": "4b77aa7d76c7b1946ca0d8ca6aa05562", - "protein_translation": "MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQGYPD", - "protein_translation_length": 338, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0749" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31060" - ], - [ - "gene_synonym", - "phrA" - ], - [ - "gene_synonym", - "chlD" - ], - [ - "gene_synonym", - "b0760" - ], - [ - "gene_synonym", - "GI:16128728" - ], - [ - "gene_synonym", - "GeneID:945368" - ], - [ - "gene_synonym", - "EcoGene:EG11677" - ], - [ - "gene_synonym", - "modF" - ], - [ - "gene_synonym", - "JW0743" - ], - [ - "gene_synonym", - "NP_415281.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002582" - ] - ], - "dna_sequence": "ATGTCATCGTTGCAAATTTTGCAAGGCACGTTTCGTCTTAGCGACACAAAAACGCTGCAATTGCCTCAGCTAACGTTAAACGCGGGTGATAGTTGGGCGTTTGTCGGTTCGAATGGAAGCGGGAAATCGGCCCTGGCCCGCGCGCTGGCGGGGGAACTTCCGCTTTTGAAAGGTGAACGGCAAAGCCAGTTTTCCCACATCACTCGTCTCTCCTTCGAGCAATTGCAAAAACTCGTCAGCGACGAATGGCAGCGGAATAACACCGATATGCTCGGCCCTGGCGAAGATGACACCGGACGCACTACGGCTGAGATCATTCAGGATGAAGTAAAGGATGCACCGCGTTGCATGCAACTGGCGCAGCAGTTCGGTATTACCGCCCTCCTCGACCGACGCTTTAAATACCTTTCCACTGGCGAGACGCGAAAAACCCTGCTGTGTCAGGCGCTGATGTCGGAGCCTGACTTGTTGATTCTTGATGAGCCGTTCGATGGCCTGGATGTTGCCTCACGTCAGCAGCTGGCTGAGCGACTCGCCTCGTTACATCAGTCCGGTATTACTCTGGTACTGGTGCTCAATCGCTTCGATGAGATCCCGGAGTTTGTCCAGTTTGCTGGCGTGCTGGCGGATTGCACGTTAGCGGAAACTGGCGCTAAAGAGGAACTGCTCCAACAAGCACTCGTCGCGCAACTGGCGCATAGTGAACAGCTTGAAGGTGTGCAACTGCCGGAGCCGGATGAACCTTCAGCACGTCACGCCTTACCCGCCAACGAACCGCGCATTGTGCTGAACAATGGCGTGGTTTCTTATAACGATCGCCCCATTCTTAATAACCTTAGCTGGCAGGTGAATCCAGGCGAACACTGGCAAATTGTCGGGCCAAATGGTGCAGGAAAATCGACGTTATTAAGCCTGGTTACTGGCGATCATCCGCAAGGTTACAGCAACGATTTGACGCTTTTCGGACGACGTCGCGGCAGCGGCGAAACCATCTGGGATATCAAAAAGCATATCGGTTACGTCAGCAGTAGTTTGCATCTGGATTACCGGGTCAGCACTACCGTGCGTAATGTGATTCTTTCTGGCTATTTTGATTCGATTGGCATTTATCAGGCCGTTTCGGATCGCCAGCAAAAACTGGTGCAGCAGTGGCTGGATATTCTCGGCATTGATAAACGCACGGCTGACGCTCCGTTCCATAGTCTTTCCTGGGGACAGCAGCGTCTGGCGCTGATTGTCCGCGCACTGGTGAAACATCCGACGTTGCTTATTCTCGATGAACCACTACAGGGGCTTGATCCGCTGAATCGCCAGCTTATCCGCCGTTTTGTTGATGTGCTGATTAGCGAAGGTGAAACGCAATTGTTGTTTGTTTCGCACCACGCTGAAGATGCGCCTGCCTGTATTACCCATCGTCTTGAGTTCGTGCCGGACGGTGGACTCTATCGCTATGTGCTGACAAAAATATATTGA", - "dna_sequence_length": 1473, - "functions": [ - "molybdate ABC transporter ATPase" - ], - "id": "CDS_742", - "location": [ - [ - "NC_000913", - 793788, - "-", - 1473 - ] - ], - "md5": "03d39d7d16f0632840b1815041b2ab21", - "parent_gene": "", - "protein_md5": "cbe3f5ba45f669738336d39fe7a1a1b8", - "protein_translation": "MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSALARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTTAEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGAKEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPILNNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY", - "protein_translation_length": 490, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "modR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9G8" - ], - [ - "gene_synonym", - "ECK0750" - ], - [ - "gene_synonym", - "chlD" - ], - [ - "gene_synonym", - "EcoGene:EG13227" - ], - [ - "gene_synonym", - "b0761" - ], - [ - "gene_synonym", - "JW0744" - ], - [ - "gene_synonym", - "GI:16128729" - ], - [ - "gene_synonym", - "modE" - ], - [ - "gene_synonym", - "NP_415282.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002585" - ], - [ - "gene_synonym", - "GeneID:945366" - ] - ], - "dna_sequence": "ATGCAGGCCGAAATCCTTCTCACCCTTAAGCTCCAACAAAAATTATTCGCCGACCCGCGCCGCATTTCGCTACTAAAACACATTGCGCTTTCCGGTTCCATTAGCCAGGGAGCGAAAGATGCCGGTATTAGCTATAAAAGCGCCTGGGATGCCATTAACGAGATGAATCAGTTAAGTGAGCATATTCTGGTCGAGCGCGCAACAGGCGGTAAAGGTGGCGGCGGCGCAGTACTGACCCGCTATGGTCAGCGACTGATTCAGCTCTATGACTTACTGGCGCAAATCCAGCAAAAAGCCTTTGATGTGTTAAGTGACGATGACGCCCTGCCGCTGAACAGCCTGCTGGCCGCGATCTCACGTTTTTCACTGCAAACCAGCGCCCGTAACCAGTGGTTCGGTACCATCACCGCCCGCGATCATGATGACGTTCAACAGCATGTTGATGTCTTACTGGCTGACGGAAAAACACGCCTGAAAGTCGCAATTACCGCACAAAGCGGCGCGCGTCTGGGGCTGGATGAAGGCAAAGAAGTGTTGATATTGCTAAAAGCGCCGTGGGTAGGTATTACTCAGGACGAGGCGGTCGCGCAAAACGCTGACAACCAATTACCGGGTATTATTAGTCATATTGAGCGCGGCGCAGAGCAGTGCGAAGTATTAATGGCGCTACCCGACGGGCAAACACTGTGCGCCACAGTGCCGGTAAATGAAGCGACTTCTCTTCAGCAAGGACAGAATGTCACGGCCTACTTTAATGCCGACAGCGTGATTATCGCCACGCTGTGCTAA", - "dna_sequence_length": 789, - "functions": [ - "transcriptional repressor for the molybdenum transport operon modABC" - ], - "id": "CDS_743", - "location": [ - [ - "NC_000913", - 794644, - "-", - 789 - ] - ], - "md5": "b6f80d8f8e47f1017cd2941b52fc3a89", - "parent_gene": "", - "protein_md5": "0b06eab3efde23ce54d4f3d54d8c0318", - "protein_translation": "MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGISYKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDVLSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNADNQLPGIISHIERGAEQCEVLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC", - "protein_translation_length": 262, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "acrZ" - ], - [ - "gene_synonym", - "ECK0751" - ], - [ - "gene_synonym", - "NP_415283.1" - ], - [ - "gene_synonym", - "JW5102" - ], - [ - "gene_synonym", - "b0762" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAW9" - ], - [ - "gene_synonym", - "EcoGene:EG14328" - ], - [ - "gene_synonym", - "ybhT" - ], - [ - "gene_synonym", - "ASAP:ABE-0002595" - ], - [ - "gene_synonym", - "GI:16128730" - ], - [ - "gene_synonym", - "GeneID:945365" - ] - ], - "dna_sequence": "ATGTTAGAGTTATTAAAAAGTCTGGTATTCGCCGTAATCATGGTACCTGTCGTGATGGCCATCATCCTGGGTCTGATTTACGGTCTTGGTGAAGTATTCAACATCTTTTCTGGTGTTGGTAAAAAAGACCAGCCCGGACAAAATCATTGA", - "dna_sequence_length": 150, - "functions": [ - "AcrAB-TolC efflux pump accessory protein, membrane-associated" - ], - "id": "CDS_744", - "location": [ - [ - "NC_000913", - 794773, - "+", - 150 - ] - ], - "md5": "a52050867c34ff3dc9e9090790081d97", - "parent_gene": "", - "protein_md5": "388b7440f751b01deb0d56ef744bb678", - "protein_translation": "MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQNH", - "protein_translation_length": 49, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415284.1" - ], - [ - "gene_synonym", - "ECK0752" - ], - [ - "gene_synonym", - "EcoGene:EG12427" - ], - [ - "gene_synonym", - "b0763" - ], - [ - "gene_synonym", - "modA" - ], - [ - "gene_synonym", - "JW0746" - ], - [ - "gene_synonym", - "GI:16128731" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37329" - ], - [ - "gene_synonym", - "ASAP:ABE-0002601" - ], - [ - "gene_synonym", - "GeneID:945364" - ] - ], - "dna_sequence": "ATGGCTCGTAAATGGTTGAACTTGTTTGCCGGGGCGGCACTCTCTTTCGCTGTTGCTGGCAATGCACTGGCAGATGAAGGGAAAATCACGGTGTTCGCCGCCGCATCACTGACTAACGCAATGCAGGACATTGCTACGCAGTTTAAAAAAGAGAAAGGCGTGGATGTGGTTTCTTCTTTCGCTTCGTCATCTACTCTCGCCCGTCAGATTGAAGCGGGTGCGCCTGCGGATCTGTTTATTTCTGCCGATCAGAAATGGATGGATTATGCGGTTGATAAAAAAGCGATCGATACAGCTACGCGTCAGACACTGCTCGGCAATAGCCTGGTCGTTGTAGCACCGAAAGCCAGCGTGCAGAAAGATTTCACCATCGACAGCAAAACCAACTGGACTTCACTGCTGAATGGCGGTCGCCTGGCGGTTGGCGATCCGGAACATGTTCCCGCTGGCATTTATGCAAAAGAAGCACTGCAAAAACTGGGCGCATGGGATACGCTCTCTCCGAAACTGGCCCCAGCGGAAGATGTTCGTGGGGCGCTGGCGCTGGTCGAACGTAACGAAGCGCCTCTGGGCATTGTCTACGGTTCTGACGCAGTTGCCAGCAAAGGGGTAAAAGTGGTTGCCACCTTCCCGGAAGATTCACATAAAAAAGTGGAATATCCGGTTGCTGTTGTGGAAGGGCATAACAATGCGACAGTGAAAGCATTTTATGATTATCTGAAGGGACCGCAGGCAGCGGAAATCTTTAAACGTTACGGATTTACAATCAAGTAA", - "dna_sequence_length": 774, - "functions": [ - "molybdate ABC transporter periplasmic binding protein", - "chlorate resistance protein" - ], - "id": "CDS_745", - "location": [ - [ - "NC_000913", - 795089, - "+", - 774 - ] - ], - "md5": "887eeafcf4298150754784f75e35ead8", - "parent_gene": "", - "protein_md5": "5d5ac211ab72e23e2d88dc3e1e0850a5", - "protein_translation": "MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDIATQFKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLGNSLVVVAPKASVQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTIK", - "protein_translation_length": 257, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "chlJ" - ], - [ - "gene_synonym", - "NP_415285.1" - ], - [ - "gene_synonym", - "b0764" - ], - [ - "gene_synonym", - "ECK0753" - ], - [ - "gene_synonym", - "modB" - ], - [ - "gene_synonym", - "JW0747" - ], - [ - "gene_synonym", - "GI:16128732" - ], - [ - "gene_synonym", - "EcoGene:EG10002" - ], - [ - "gene_synonym", - "GeneID:945361" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF01" - ], - [ - "gene_synonym", - "ASAP:ABE-0002603" - ] - ], - "dna_sequence": "ATGATACTGACCGATCCAGAATGGCAGGCAGTTTTATTAAGCCTGAAAGTTTCTTCCCTGGCTGTGCTGTTTAGCCTGCCGTTTGGGATCTTTTTTGCCTGGTTACTGGTGCGTTGCACGTTTCCGGGCAAAGCTCTGCTCGACAGCGTACTGCATCTACCGCTGGTGTTACCGCCCGTGGTCGTCGGTTACTTATTATTAGTTTCGATGGGACGGCGCGGATTTATCGGTGAACGTCTGTATGACTGGTTTGGTATTACCTTCGCCTTTAGCTGGCGCGGCGCGGTTCTCGCTGCCGCCGTCATGTCGTTTCCGCTGATGGTGCGGGCAATTCGTCTGGCGCTGGAAGGGGTTGATGTCAAACTGGAACAGGCCGCAAGAACACTGGGGGCCGGGCGCTGGCGCGTTTTCTTTACTATCACGTTACCGCTGACCTTACCGGGAATTATTGTTGGTACGGTACTGGCTTTTGCTCGTTCTCTCGGTGAGTTTGGTGCAACCATCACCTTTGTGTCGAACATTCCTGGTGAAACGCGAACCATTCCTTCTGCCATGTATACCCTGATCCAGACCCCCGGCGGGGAAAGTGGAGCGGCGAGACTGTGCATTATTTCTATTGCGCTGGCGATGATCTCCCTGTTGATTTCAGAATGGCTGGCCAGAATCAGCCGTGAACGGGCGGGGCGCTAA", - "dna_sequence_length": 690, - "functions": [ - "molybdate ABC transporter permease", - "chlorate resistance protein" - ], - "id": "CDS_746", - "location": [ - [ - "NC_000913", - 795862, - "+", - 690 - ] - ], - "md5": "b7c655bd2dc47793ca79fc50b5d77313", - "parent_gene": "", - "protein_md5": "d21ee2d45d2f1b00d1430aeaf33664ab", - "protein_translation": "MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR", - "protein_translation_length": 229, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10152" - ], - [ - "gene_synonym", - "b0765" - ], - [ - "gene_synonym", - "ECK0754" - ], - [ - "gene_synonym", - "chlD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09833" - ], - [ - "gene_synonym", - "GeneID:945362" - ], - [ - "gene_synonym", - "modC" - ], - [ - "gene_synonym", - "NP_415286.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002605" - ], - [ - "gene_synonym", - "GI:16128733" - ], - [ - "gene_synonym", - "narD" - ], - [ - "gene_synonym", - "JW0748" - ] - ], - "dna_sequence": "ATGCTGGAACTGAATTTTTCCCAGACGTTGGGCAACCATTGCCTGACTATTAATGAAACGCTGCCCGCCAATGGCATCACTGCTATCTTTGGCGTCTCCGGTGCCGGAAAAACTTCGCTGATTAACGCCATCAGTGGACTGACGCGCCCGCAAAAAGGGCGGATTGTCCTCAATGGGCGGGTACTAAATGATGCCGAAAAAGGTATCTGCCTGACGCCGGAAAAGCGTCGCGTTGGCTATGTTTTTCAGGATGCGCGGCTGTTCCCGCATTACAAAGTGCGTGGCAATCTGCGCTACGGCATGTCGAAAAGTATGGTCGATCAGTTCGATAAGCTGGTGGCGCTTTTAGGCATTGAACCGTTGCTTGACCGTTTACCAGGCAGCCTGTCCGGAGGCGAAAAACAGCGCGTGGCGATTGGTCGGGCTTTGCTGACAGCACCGGAATTGCTGTTGCTGGATGAACCGCTGGCGTCACTGGATATTCCGCGTAAACGCGAACTGTTGCCTTATCTGCAACGGCTGACACGGGAAATCAACATTCCGATGTTGTATGTCAGCCATTCGCTGGATGAGATCCTCCATCTGGCAGACAGAGTGATGGTACTGGAAAACGGTCAGGTGAAAGCCTTTGGCGCGCTGGAGGAAGTGTGGGGCAGTAGCGTGATGAATCCGTGGCTGCCGAAAGAGCAACAAAGTAGCATTCTGAAAGTGACGGTGCTTGAGCATCATCCGCATTACGCGATGACCGCGCTGGCGCTGGGCGATCAGCATTTGTGGGTCAATAAGCTGGACGAACCGCTGCAAGCTGCGCTACGTATCCGCATTCAGGCTTCCGATGTTTCTCTGGTTTTACAACCGCCGCAGCAAACCAGCATTCGTAACGTATTGCGGGCAAAAGTTGTTAATAGTTATGACGACAACGGCCAGGTGGAAGTGGAACTGGAAGTCGGCGGTAAAACGCTGTGGGCGCGTATCAGCCCGTGGGCCAGGGATGAACTGGCGATCAAACCTGGCCTGTGGCTGTACGCGCAAATTAAAAGTGTGTCGATAACCGCCTGA", - "dna_sequence_length": 1059, - "functions": [ - "molybdate ABC transporter ATPase", - "chlorate resistance protein" - ], - "id": "CDS_747", - "location": [ - [ - "NC_000913", - 796554, - "+", - 1059 - ] - ], - "md5": "3b18dc04a85bdd92e8af5ee1c65bc944", - "parent_gene": "", - "protein_md5": "a6e8614a32fc93e74348ce170275822f", - "protein_translation": "MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMSKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSITA", - "protein_translation_length": 352, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11239" - ], - [ - "gene_synonym", - "GeneID:945372" - ], - [ - "gene_synonym", - "b0766" - ], - [ - "gene_synonym", - "ECK0755" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21829" - ], - [ - "gene_synonym", - "modD" - ], - [ - "gene_synonym", - "NP_415287.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002607" - ], - [ - "gene_synonym", - "ybhA" - ], - [ - "gene_synonym", - "JW0749" - ], - [ - "gene_synonym", - "GI:16128734" - ] - ], - "dna_sequence": "ATGACCACACGCGTGATTGCTCTCGACTTAGACGGCACCTTATTGACCCCGAAAAAGACCCTGCTTCCTTCATCGATAGAAGCCCTGGCCCGCGCTCGCGAAGCAGGCTATCAATTAATCATCGTCACAGGTCGCCATCACGTCGCTATTCATCCTTTTTATCAGGCGCTGGCGCTGGATACACCTGCTATTTGCTGTAATGGCACCTATTTGTATGATTATCATGCAAAAACCGTGCTGGAAGCGGACCCAATGCCCGTTATTAAAGCCCTGCAACTCATTGAGATGCTGAATGAACACCACATTCACGGTCTGATGTATGTCGATGATGCAATGGTCTATGAGCACCCGACCGGGCATGTCATTCGCACATCTAACTGGGCGCAAACCCTGCCGCCGGAACAGCGTCCGACTTTCACACAAGTCGCTTCTCTGGCTGAAACGGCGCAACAAGTTAACGCCGTATGGAAGTTCGCCCTGACGCACGATGACCTGCCGCAATTGCAGCATTTTGGTAAGCATGTCGAACATGAACTGGGACTGGAGTGTGAATGGTCCTGGCACGATCAGGTTGATATTGCACGCGGCGGCAACAGCAAAGGTAAACGTTTGACGAAATGGGTTGAGGCGCAAGGTTGGTCGATGGAAAACGTCGTGGCATTCGGCGATAACTTTAATGATATCAGTATGCTGGAAGCCGCTGGTACAGGCGTGGCGATGGGCAACGCCGATGACGCGGTAAAAGCGCGCGCCAACATTGTGATTGGTGATAACACCACCGACAGCATTGCCCAGTTCATTTATAGCCACCTGATTTAA", - "dna_sequence_length": 819, - "functions": [ - "pyridoxal phosphate (PLP) phosphatase" - ], - "id": "CDS_748", - "location": [ - [ - "NC_000913", - 798431, - "-", - 819 - ] - ], - "md5": "6d152b8fd5b1eb95df710340ed881c41", - "parent_gene": "", - "protein_md5": "eb2913f1c00188b09a667b8f22b6235e", - "protein_translation": "MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI", - "protein_translation_length": 272, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13231" - ], - [ - "gene_synonym", - "blu" - ], - [ - "gene_synonym", - "b0767" - ], - [ - "gene_synonym", - "pgl" - ], - [ - "gene_synonym", - "GeneID:946398" - ], - [ - "gene_synonym", - "ECK0756" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52697" - ], - [ - "gene_synonym", - "JW0750" - ], - [ - "gene_synonym", - "ASAP:ABE-0002611" - ], - [ - "gene_synonym", - "ybhE" - ], - [ - "gene_synonym", - "NP_415288.1" - ], - [ - "gene_synonym", - "GI:16128735" - ] - ], - "dna_sequence": "ATGAAGCAAACAGTTTATATCGCCAGCCCTGAGAGCCAGCAAATTCACGTCTGGAATCTGAATCATGAAGGCGCACTGACGCTGACACAGGTTGTCGATGTGCCGGGGCAGGTGCAGCCGATGGTGGTCAGCCCGGACAAACGTTATCTCTATGTTGGTGTTCGCCCTGAGTTTCGCGTCCTGGCGTATCGTATCGCCCCGGACGATGGCGCACTGACCTTTGCCGCAGAGTCTGCGCTGCCGGGTAGTCCGACGCATATTTCCACCGATCACCAGGGGCAGTTTGTCTTTGTAGGTTCTTACAATGCGGGTAACGTGAGCGTAACGCGTCTGGAAGATGGCCTGCCAGTGGGCGTCGTCGATGTGGTCGAGGGGCTGGACGGTTGCCATTCCGCCAATATCTCACCGGACAACCGTACGCTGTGGGTTCCGGCATTAAAGCAGGATCGCATTTGCCTGTTTACGGTCAGCGATGATGGTCATCTCGTGGCGCAGGACCCTGCGGAAGTGACCACCGTTGAAGGGGCCGGCCCGCGTCATATGGTATTCCATCCAAACGAACAATATGCGTATTGCGTCAATGAGTTAAACAGCTCAGTGGATGTCTGGGAACTGAAAGATCCGCACGGTAATATCGAATGTGTCCAGACGCTGGATATGATGCCGGAAAACTTCTCCGACACCCGTTGGGCGGCTGATATTCATATCACCCCGGATGGTCGCCATTTATACGCCTGCGACCGTACCGCCAGCCTGATTACCGTTTTCAGCGTTTCGGAAGATGGCAGCGTGTTGAGTAAAGAAGGCTTCCAGCCAACGGAAACCCAGCCGCGCGGCTTCAATGTTGATCACAGCGGCAAGTATCTGATTGCCGCCGGGCAAAAATCTCACCACATCTCGGTATACGAAATTGTTGGCGAGCAGGGGCTACTGCATGAAAAAGGCCGCTATGCGGTCGGGCAGGGACCAATGTGGGTGGTGGTTAACGCACACTAA", - "dna_sequence_length": 996, - "functions": [ - "6-phosphogluconolactonase" - ], - "id": "CDS_749", - "location": [ - [ - "NC_000913", - 798586, - "+", - 996 - ] - ], - "md5": "edd638fd58378c43009455ee1501cae7", - "parent_gene": "", - "protein_md5": "5adfc32c620373e38308e89f4358b1d3", - "protein_translation": "MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH", - "protein_translation_length": 331, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:145698233" - ], - [ - "gene_synonym", - "EcoGene:EG13230" - ], - [ - "gene_synonym", - "b0768" - ], - [ - "gene_synonym", - "ECK0757" - ], - [ - "gene_synonym", - "NP_415289.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52696" - ], - [ - "gene_synonym", - "ybhD" - ], - [ - "gene_synonym", - "ASAP:ABE-0002613" - ], - [ - "gene_synonym", - "JW5896" - ], - [ - "gene_synonym", - "GeneID:944869" - ] - ], - "dna_sequence": "ATGAAGCATGAATTATCAAGTATGAAGGCATTTGTCATACTGGCAGAGTCCAGTTCGTTTAACAATGCCGCTAAATTACTCAATATTACGCAACCTGCATTAACGCGAAGAATAAAAAAGATGGAGGAAGATTTACATGTTCAACTATTTGAGCGTACAACTCGCAAGGTTACGTTAACAAAAGCAGGAAAAAGGTTGCTCCCGGAGGCGCGGGAATTAATAAAGAAATTCGATGAAACGCTTTTTAATATTCGTGATATGAATGCTTATCATCGTGGTATGGTGACGTTAGCGTGTATTCCGACCGCAGTATTTTATTTTTTACCGCTGGCAATCGGTAAATTTAATGAGCTGTATCCCAATATTAAAGTGCGGATTCTGGAACAAGGCACGAATAATTGCATGGAATCGGTGCTGTGTAACGAATCAGACTTTGGCATAAACATGAACAACGTCACAAATTCATCCATTGATTTTACCCCACTGGTCAACGAGCCGTTCGTGCTGGCCTGTCGGCGTGACCATCCATTGGCCAAAAAGCAGCTTGTAGAATGGCAGGAGTTAGTGGGTTACAAAATGATTGGCGTACGCTCCTCCAGCGGCAACCGACTGTTGATAGAACAACAGCTGGCCGACAAGCCCTGGAAGCTGGACTGGTTTTACGAAGTGCGTCATCTTTCGACGTCATTAGGACTGGTGGAGGCGGGACTGGGGATTTCGGCGCTTCCTGGCCTGGCAATGCCTCATGCGCCCTATTCTTCGATTATTGGTATCCCATTGGTGGAACCCGTTATACGTCGAACATTGGGAATAATTCGCCGTAAAGATGCCGTACTTTCTCCAGCAGCAGAACGCTTTTTTGCCTTGCTGATTAATTTATGGACTGACGATAAAGACAATTTGTGGACCAATATCGTCGAACGCCAGAGACACGCGTTACAGGAGATAGGTTAA", - "dna_sequence_length": 954, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_750", - "location": [ - [ - "NC_000913", - 800575, - "-", - 954 - ] - ], - "md5": "daf6b3c9e038e425ac5d5bbe5de89176", - "parent_gene": "", - "protein_md5": "77bbcd0dc6af560cf8a35370040d69ac", - "protein_translation": "MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHVQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG", - "protein_translation_length": 317, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0758" - ], - [ - "gene_synonym", - "GeneID:945375" - ], - [ - "gene_synonym", - "b0769" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAV8" - ], - [ - "gene_synonym", - "NP_415290.1" - ], - [ - "gene_synonym", - "JW0752" - ], - [ - "gene_synonym", - "ybhH" - ], - [ - "gene_synonym", - "ASAP:ABE-0002618" - ], - [ - "gene_synonym", - "GI:16128737" - ], - [ - "gene_synonym", - "EcoGene:EG13664" - ] - ], - "dna_sequence": "ATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAACCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGTAACGATCTGGAAATTGACGGTATTGGCGGCGGTAATCCACTGACCAGTAAAGTCGCCATTATTAGCCGTTCCAGCGATCCGCGTGCTGATGTCGATTATCTGTTTGCGCAGGTAATCGTTCATGAGCAACGTGTCGATACCACGCCTAACTGCGGCAATATGCTGTCTGGTGTTGGGGCATTCGCCATTGAAAATGGTTTGATTGCAGCGACTTCGCCAGTTACTCGCGTACGTATCCGCAACGTCAATACGGGTACGTTCATCGAAGCTGATGTGCAAACGCCAAATGGTGTTGTCGAGTACGAGGGTAGCGCCAGAATTGACGGCGTACCGGGTACTGCCGCACCGGTTGCGCTCACTTTCCTGAATGCCGCTGGAACCAAAACCGGAAAAGTTTTCCCGACTGATAATCAGATTGATTATTTTGACGATGTCCCGGTGACCTGTATCGATATGGCGATGCCAGTCGTCATTATTCCGGCTGAATATCTGGGAAAAACAGGTTATGAATTACCGGCGGAACTGGATGCCGACAAAGCATTATTAGCCCGCATTGAATCTATCCGTCTACAAGCGGGTAAAGCAATGGGCTTAGGTGATGTCAGTAATATGGTTATCCCTAAACCTGTGCTTATTTCTCCAGCGCAGAAAGGCGGGGCAATTAATGTGCGTTATTTTATGCCGCATTCTTGCCATCGCGCGCTGGCGATAACCGGTGCTATTGCTATTTCCAGTAGTTGTGCATTGGAAGGCACCGTCACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCAGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGA", - "dna_sequence_length": 1053, - "functions": [ - "putative PrpF family isomerase" - ], - "id": "CDS_751", - "location": [ - [ - "NC_000913", - 800759, - "+", - 1053 - ] - ], - "md5": "4b4bade147c723384528e7fb0ada1652", - "parent_gene": "", - "protein_md5": "03b7bff065515b86e5c38cd6729de0b6", - "protein_translation": "MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP", - "protein_translation_length": 350, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0759" - ], - [ - "gene_synonym", - "ASAP:ABE-0002621" - ], - [ - "gene_synonym", - "NP_415291.1" - ], - [ - "gene_synonym", - "b0770" - ], - [ - "gene_synonym", - "JW0753" - ], - [ - "gene_synonym", - "GI:16128738" - ], - [ - "gene_synonym", - "ybhI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75763" - ], - [ - "gene_synonym", - "EcoGene:EG13665" - ], - [ - "gene_synonym", - "GeneID:945377" - ] - ], - "dna_sequence": "ATGAATAAGAAATCGTTATGGAAGCTAATTCTGATATTAGCGATCCCATGTATTATTGGTTTTATGCCAGCTCCGGCAGGATTAAGCGAACTGGCGTGGGTGCTTTTTGGTATTTACCTGGCGGCCATTGTGGGGCTGGTTATCAAGCCTTTCCCGGAACCTGTCGTACTGTTAATTGCCGTTGCTGCCTCAATGGTGGTGGTCGGTAACTTATCCGACGGTGCGTTTAAAACCACCGCCGTATTAAGCGGTTACTCTTCAGGTACCACCTGGCTGGTGTTCTCGGCGTTTACCTTAAGCGCCGCATTTGTGACCACCGGTTTAGGTAAACGTATTGCCTATCTGCTGATTGGTAAAATCGGTAACACCACGCTGGGTCTGGGTTACGTTACGGTATTCCTCGATCTGGTACTGGCTCCGGCAACACCGTCTAACACCGCGCGTGCGGGCGGCATTGTGTTACCGATCATCAACAGCGTGGCGGTGGCTTTGGGGTCCGAACCGGAAAAAAGTCCGCGTCGTGTCGGACATTACCTGATGATGTCCATTTACATGGTCACCAAAACCACCAGCTATATGTTCTTTACCGCAATGGCGGGGAACATTCTGGCGCTGAAAATGATCAACGACATTCTGCACCTGCAAATTAGCTGGGGTGGATGGGCGCTGGCAGCCGGATTGCCGGGCATCATTATGCTGCTGGTCACCCCGCTGGTGATTTACACCATGTATCCACCAGAAATTAAGAAGGTGGATAACAAAACCATCGCTAAAGCGGGCCTTGCCGAACTAGGACCGATGAAAATCCGCGAAAAAATGCTGCTCGGTGTCTTTGTGCTGGCGCTGCTGGGCTGGATTTTCAGTAAGTCTCTGGGGGTTGATGAATCCACCGTGGCAATCGTTGTTATGGCAACCATGCTGCTGCTGGGTATCGTTACCTGGGAAGACGTGGTTAAAAATAAAGGCGGCTGGAATACCTTAATCTGGTACGGCGGTATTATCGGCTTAAGCTCCTTATTATCGAAAGTTAAATTCTTCGAATGGTTAGCTGAAGTCTTTAAAAATAACCTGGCATTTGATGGTCACGGTAACGTTGCTTTCTTCGTTATTATTTTCCTCAGCATTATCGTGCGTTATTTCTTCGCTTCCGGTAGTGCCTATATCGTTGCTATGTTACCGGTATTTGCCATGCTGGCGAACGTCTCCGGCGCACCGTTAATGTTAACCGCGCTGGCACTGTTGTTCTCCAACTCCTATGGCGGCATGGTTACTCACTATGGCGGCGCGGCAGGTCCGGTCATCTTTGGCGTGGGTTATAACGATATTAAATCCTGGTGGTTGGTCGGTGCGGTACTGACGATATTAACCTTCCTGGTGCATATCACCCTCGGCGTGTGGTGGTGGAATATGCTGATCGGCTGGAACATGCTGTAA", - "dna_sequence_length": 1434, - "functions": [ - "putative DASS family tricarboxylate or dicarboxylate transporter" - ], - "id": "CDS_752", - "location": [ - [ - "NC_000913", - 801887, - "+", - 1434 - ] - ], - "md5": "42f330863600a36151b6f20f4c2e4586", - "parent_gene": "", - "protein_md5": "ebb61c155b13bb7711af31ae5224e870", - "protein_translation": "MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML", - "protein_translation_length": 477, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13666" - ], - [ - "gene_synonym", - "ASAP:ABE-0002626" - ], - [ - "gene_synonym", - "ybhJ" - ], - [ - "gene_synonym", - "b0771" - ], - [ - "gene_synonym", - "GeneID:945380" - ], - [ - "gene_synonym", - "ECK0760" - ], - [ - "gene_synonym", - "JW5103" - ], - [ - "gene_synonym", - "GI:90111167" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75764" - ], - [ - "gene_synonym", - "NP_415292.2" - ] - ], - "dna_sequence": "ATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGTAATAACGAAATAATTGCCGAAGAACATTTCACCGGCGAAATTAAAAAAGAAGAAGCCAAAAAAGGCACTATTGCCTGGTCTATTCTCTCTTCGCATAATACGTCCGGAAATATGGATAAACTTAAAATTAAGTTTGATTCATTAGCCTCTCACGATATTACCTTTGTTGGTATTGTACAGACCGCTAAAGCGTCCGGTATGGAACGTTTCCCGCTGCCGTATGTGCTGACCAACTGCCATAACTCACTCTGCGCCGTCGGCGGCACTATTAACGGTGATGACCATGTTTTTGGTTTATCGGCGGCCCAGCGTTATGGCGGTATTTTTGTGCCTCCGCATATTGCGGTCATCCATCAATATATGCGTGAGATGATGGCAGGCGGCGGCAAAATGATCCTCGGGTCAGACAGCCACACCCGTTACGGTGCATTAGGGACAATGGCAGTCGGTGAGGGCGGCGGTGAGTTGGTAAAACAGCTGCTTAATGACACCTGGGATATCGACTATCCGGGCGTGGTTGCGGTGCATCTGACCGGAAAACCTGCGCCGTATGTGGGGCCACAGGATGTGGCGCTGGCTATCATTGGCGCGGTGTTCAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAAGTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAGCGCCATCAAACCAATGATTGCGCTGCCGTTCCACCCGAGCAACGTGTATGAAATCGACACACTGAACCAGAACCTGACCGACATTCTGCGTGAGATTGAAATTGAGTCCGAACGCGTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAATGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTACGAAAACGTCATCGCGGCGGCGAATGCACTGCGCGGTCAATCCTGTGGCAATGACACCTTCTCGCTGGCAGTTTACCCGTCATCACAGCCGGTGTTTATGGATCTCGCCAAAAAAGGTGTGGTAGCAGATTTGATTGGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGCGCGGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAGCTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATCGCTGCGACTGCGGCAAACGGTGGCTATTTAACCTCTGCCAGCGAACTTGATTGCTGGGACAACGTGCCGGAGTACGCCTTCGATGTAACGCCGTATAAAAACCGTGTTTATCAGGGCTTTGTGAAAGGGGCAACTCAGCAACCGCTGATTTACGGGCCGAACATTAAAGACTGGCCGGAATTGGGTGCGCTGACTGACAATATCGTCCTGAAAGTGTGCTCGAAGATCCTCGACGAAGTGACCACCACCGACGAACTGATTCCTTCCGGTGAAACCTCTTCTTATCGTTCAAATCCGATTGGTCTGGCGGAGTTTACCCTGTCTCGCCGCGATCCCGGTTATGTTAGCAGAAGTAAAGCGACTGCTGAGCTGGAAAATCAGCGTCTGGCGGGGAATGTCAGCGAGCTGACAGAGGTGTTTGCGCGCATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGCGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAGTGGGGGATTACATTTACATCCCTGGCATTAAAGCGGCGCTGGATAATCCGGGTACGACGTTTAAAGGTTATGTGATCCATGAAGATGCGCCGGTAACGGAAATTACGCTCTATATGGAAAGTCTGACTGCTGAAGAGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAA", - "dna_sequence_length": 2262, - "functions": [ - "aconitase family protein" - ], - "id": "CDS_753", - "location": [ - [ - "NC_000913", - 803503, - "+", - 2262 - ] - ], - "md5": "7289a479e76c9d9b354a73946f1b894e", - "parent_gene": "", - "protein_md5": "6a396a78209cd015940d1535e5abb1e7", - "protein_translation": "MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVSRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM", - "protein_translation_length": 753, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46130" - ], - [ - "gene_synonym", - "EcoGene:EG12875" - ], - [ - "gene_synonym", - "ASAP:ABE-0002629" - ], - [ - "gene_synonym", - "GI:16128740" - ], - [ - "gene_synonym", - "b0772" - ], - [ - "gene_synonym", - "ECK0761" - ], - [ - "gene_synonym", - "GeneID:945381" - ], - [ - "gene_synonym", - "JW0755" - ], - [ - "gene_synonym", - "NP_415293.1" - ], - [ - "gene_synonym", - "ybhC" - ] - ], - "dna_sequence": "GTGAACACATTTTCAGTTTCCCGTCTGGCGCTGGCATTGGCTTTTGGCGTGACGCTGACCGCCTGTAGCTCAACCCCGCCCGATCAACGTCCTTCTGATCAAACCGCGCCTGGTACCTCTTCTCGCCCGATTCTGTCGGCAAAAGAAGCGCAGAATTTCGATGCTCAACACTATTTTGCATCCCTGACACCAGGTGCTGCAGCGTGGAATCCTTCCCCGATTACCCTGCCTGCGCAACCTGACTTTGTTGTCGGCCCGGCGGGCACTCAAGGTGTAACGCATACCACGATTCAGGCGGCGGTAGATGCGGCAATTATCAAGCGTACCAACAAGCGCCAGTATATTGCCGTGATGCCTGGTGAGTATCAGGGAACGGTATATGTCCCTGCCGCTCCGGGTGGAATTACTCTGTACGGTACAGGTGAAAAACCGATTGATGTGAAGATTGGGCTTTCCCTTGATGGTGGCATGAGCCCTGCCGACTGGCGTCACGACGTCAACCCGCGCGGCAAATATATGCCAGGTAAACCAGCGTGGTATATGTACGATAGCTGCCAGAGCAAACGCAGCGACAGTATCGGTGTTCTCTGCTCTGCGGTCTTCTGGTCACAAAACAATGGCCTGCAACTGCAAAATCTGACCATCGAAAACACGCTGGGCGATAGCGTAGATGCAGGTAACCATCCGGCGGTGGCACTGCGTACTGATGGTGACCAGGTACAGATTAACAACGTTAACATTCTCGGTCGTCAGAACACCTTCTTTGTCACCAACAGCGGTGTGCAGAACCGTCTGGAAACGAATCGTCAGCCGCGTACGCTGGTGACCAACAGCTACATTGAAGGGGATGTGGATATCGTTTCTGGTCGCGGCGCAGTGGTGTTCGATAACACCGAATTCCGCGTGGTGAACTCACGTACTCAGCAAGAAGCGTATGTGTTTGCACCGGCTACGCTGTCCAACATTTACTACGGTTTCCTCGCCGTAAACAGCCGTTTCAATGCTTTCGGTGATGGTGTGGCGCAACTGGGCCGCTCGCTGGATGTTGATGCCAATACCAACGGTCAGGTGGTGATCCGTGATAGCGCCATCAACGAAGGTTTTAACACGGCTAAACCGTGGGCCGATGCGGTGATCTCTAATCGTCCGTTTGCGGGTAATACCGGCAGCGTAGATGATAACGACGAAATACAGCGCAATCTGAATGACACTAACTACAACCGCATGTGGGAATACAATAACCGCGGCGTGGGTAGTAAAGTGGTTGCAGAGGCGAAGAAGTAA", - "dna_sequence_length": 1284, - "functions": [ - "acyl-CoA thioesterase, lipoprotein" - ], - "id": "CDS_754", - "location": [ - [ - "NC_000913", - 807281, - "-", - 1284 - ] - ], - "md5": "1650c786017d3059146fb6637510f69e", - "parent_gene": "", - "protein_md5": "328680e07a1114581f5ecb3856580677", - "protein_translation": "MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK", - "protein_translation_length": 427, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415294.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002632" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P12994" - ], - [ - "gene_synonym", - "GeneID:945383" - ], - [ - "gene_synonym", - "EcoGene:EG11238" - ], - [ - "gene_synonym", - "b0773" - ], - [ - "gene_synonym", - "GI:16128741" - ], - [ - "gene_synonym", - "JW0756" - ], - [ - "gene_synonym", - "ECK0762" - ], - [ - "gene_synonym", - "ybhB" - ] - ], - "dna_sequence": "ATGAAACTCATCAGTAACGATCTGCGCGATGGCGATAAATTGCCGCATCGTCATGTCTTTAACGGCATGGGTTACGATGGCGATAATATTTCACCGCATCTGGCGTGGGATGATGTTCCTGCGGGAACGAAAAGTTTTGTTGTCACCTGCTACGACCCGGATGCGCCAACCGGCTCCGGCTGGTGGCACTGGGTAGTTGTTAACTTACCCGCTGATACCCGCGTATTACCGCAAGGGTTTGGCTCTGGTCTGGTAGCAATGCCAGACGGCGTTTTGCAGACGCGTACCGACTTTGGTAAAACCGGGTACGATGGCGCAGCACCGCCGAAAGGCGAAACTCATCGCTACATTTTTACCGTTCACGCGCTGGATATAGAACGTATTGATGTCGATGAAGGTGCCAGCGGCGCGATGGTCGGGTTTAACGTTCATTTCCACTCTCTGGCAAGCGCCTCGATTACTGCGATGTTTAGTTAA", - "dna_sequence_length": 477, - "functions": [ - "kinase inhibitor homolog, UPF0098 family" - ], - "id": "CDS_755", - "location": [ - [ - "NC_000913", - 807909, - "-", - 477 - ] - ], - "md5": "135b35242f3c9cb5917f26c788f75f71", - "parent_gene": "", - "protein_md5": "878e895a9d6cf67c2b7aea963aedcd08", - "protein_translation": "MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS", - "protein_translation_length": 158, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002635" - ], - [ - "gene_synonym", - "bioA" - ], - [ - "gene_synonym", - "b0774" - ], - [ - "gene_synonym", - "GI:16128742" - ], - [ - "gene_synonym", - "NP_415295.1" - ], - [ - "gene_synonym", - "JW0757" - ], - [ - "gene_synonym", - "ECK0763" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P12995" - ], - [ - "gene_synonym", - "EcoGene:EG10117" - ], - [ - "gene_synonym", - "GeneID:945376" - ] - ], - "dna_sequence": "ATGACAACGGACGATCTTGCCTTTGACCAACGCCATATCTGGCACCCATACACATCCATGACCTCCCCTCTGCCGGTTTATCCGGTGGTGAGCGCCGAAGGTTGCGAGCTGATTTTGTCTGACGGCAGACGCCTGGTTGACGGTATGTCGTCCTGGTGGGCGGCGATCCACGGCTACAATCACCCGCAGCTTAATGCGGCGATGAAGTCGCAAATTGATGCCATGTCGCATGTGATGTTTGGCGGTATCACCCATGCGCCAGCCATTGAGCTGTGCCGCAAACTGGTGGCGATGACGCCGCAACCGCTGGAGTGCGTTTTTCTCGCGGACTCCGGTTCCGTAGCGGTGGAAGTGGCGATGAAAATGGCGTTGCAGTACTGGCAAGCCAAAGGCGAAGCGCGCCAGCGTTTTCTGACCTTCCGCAATGGTTATCATGGCGATACCTTTGGCGCGATGTCGGTGTGCGATCCGGATAACTCAATGCACAGTCTGTGGAAAGGCTACCTGCCAGAAAACCTGTTTGCTCCCGCCCCGCAAAGCCGCATGGATGGCGAATGGGATGAGCGCGATATGGTGGGCTTTGCCCGCCTGATGGCGGCGCATCGTCATGAAATCGCGGCGGTGATCATTGAGCCGATTGTCCAGGGCGCAGGCGGGATGCGCATGTACCATCCGGAATGGTTAAAACGAATCCGCAAAATATGCGATCGCGAAGGTATCTTGCTGATTGCCGACGAGATCGCCACTGGATTTGGTCGTACCGGGAAACTGTTTGCCTGTGAACATGCAGAAATCGCGCCGGACATTTTGTGCCTCGGTAAAGCCTTAACCGGCGGCACAATGACCCTTTCCGCCACACTCACCACGCGCGAGGTTGCAGAAACCATCAGTAACGGTGAAGCCGGTTGCTTTATGCATGGGCCAACTTTTATGGGCAATCCGCTGGCCTGCGCGGCAGCAAACGCCAGCCTGGCGATTCTCGAATCTGGCGACTGGCAGCAACAGGTGGCGGATATTGAAGTACAGCTGCGCGAGCAACTTGCCCCCGCCCGTGATGCCGAAATGGTTGCCGATGTGCGCGTACTGGGGGCCATTGGCGTGGTCGAAACCACTCATCCGGTGAATATGGCGGCGCTGCAAAAATTCTTTGTCGAACAGGGTGTCTGGATCCGGCCTTTTGGCAAACTGATTTACCTGATGCCGCCCTATATTATTCTCCCGCAACAGTTGCAGCGTCTGACCGCAGCGGTTAACCGCGCGGTACAGGATGAAACATTTTTTTGCCAATAA", 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"gene_synonym", - "GI:16128743" - ], - [ - "gene_synonym", - "NP_415296.1" - ], - [ - "gene_synonym", - "ECK0764" - ], - [ - "gene_synonym", - "ASAP:ABE-0002644" - ], - [ - "gene_synonym", - "EcoGene:EG10118" - ], - [ - "gene_synonym", - "GeneID:945370" - ], - [ - "gene_synonym", - "JW0758" - ] - ], - "dna_sequence": "ATGGCTCACCGCCCACGCTGGACATTGTCGCAAGTCACAGAATTATTTGAAAAACCGTTGCTGGATCTGCTGTTTGAAGCGCAGCAGGTGCATCGCCAGCATTTCGATCCTCGTCAGGTGCAGGTCAGCACGTTGCTGTCGATTAAGACCGGAGCTTGTCCGGAAGATTGCAAATACTGCCCGCAAAGCTCGCGCTACAAAACCGGGCTGGAAGCCGAGCGGTTGATGGAAGTTGAACAGGTGCTGGAGTCGGCGCGCAAAGCGAAAGCGGCAGGATCGACGCGCTTCTGTATGGGCGCGGCGTGGAAGAATCCCCACGAACGCGATATGCCGTACCTGGAACAAATGGTGCAGGGGGTAAAAGCGATGGGGCTGGAGGCGTGTATGACGCTGGGCACGTTGAGTGAATCTCAGGCGCAGCGCCTCGCGAACGCCGGGCTGGATTACTACAACCACAACCTGGACACCTCGCCGGAGTTTTACGGCAATATCATCACCACACGCACTTATCAGGAACGCCTCGATACGCTGGAAAAAGTGCGCGATGCCGGGATCAAAGTCTGTTCTGGCGGCATTGTGGGCTTAGGCGAAACGGTAAAAGATCGCGCCGGATTATTGCTGCAACTGGCAAACCTGCCGACGCCGCCGGAAAGCGTGCCAATCAACATGCTGGTGAAGGTGAAAGGCACGCCGCTTGCCGATAACGATGATGTCGATGCCTTTGATTTTATTCGCACCATTGCGGTCGCGCGGATCATGATGCCAACCTCTTACGTGCGCCTTTCTGCCGGACGCGAGCAGATGAACGAACAGACTCAGGCGATGTGCTTTATGGCAGGCGCAAACTCGATTTTCTACGGTTGCAAACTGCTGACCACGCCGAATCCGGAAGAAGATAAAGACCTGCAACTGTTCCGCAAACTGGGGCTAAATCCGCAGCAAACTGCCGTGCTGGCAGGGGATAACGAACAACAGCAACGTCTTGAACAGGCGCTGATGACCCCGGACACCGACGAATATTACAACGCGGCAGCATTATGA", - "dna_sequence_length": 1041, - "functions": [ - "biotin synthase" - ], - "id": "CDS_757", - "location": [ - [ - "NC_000913", - 809344, - "+", - 1041 - ] - ], - "md5": "d97f2efd58335e36fb7bbbb5f0313e7f", - "parent_gene": "", - "protein_md5": "ecbf75df6acdc7918e9a9eed66c72b8d", - "protein_translation": "MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTDEYYNAAAL", - "protein_translation_length": 346, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945384" - ], - [ - "gene_synonym", - "bioF" - ], - [ - "gene_synonym", - "EcoGene:EG10121" - ], - [ - "gene_synonym", - "GI:16128744" - ], - [ - "gene_synonym", - "b0776" - ], - [ - "gene_synonym", - "ECK0765" - ], - [ - "gene_synonym", - "ASAP:ABE-0002646" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P12998" - ], - [ - "gene_synonym", - "JW0759" - ], - [ - "gene_synonym", - "NP_415297.1" - ] - ], - "dna_sequence": "ATGAGCTGGCAGGAGAAAATCAACGCGGCGCTCGATGCGCGGCGTGCTGCCGATGCCCTGCGTCGCCGTTATCCGGTGGCGCAAGGAGCCGGACGCTGGCTGGTGGCGGATGATCGCCAGTATCTGAACTTTTCCAGTAACGATTATTTAGGTTTAAGCCATCATCCGCAAATTATCCGTGCCTGGCAGCAGGGGGCGGAGCAATTTGGCATCGGTAGCGGCGGCTCCGGTCACGTCAGCGGTTATAGCGTGGTGCATCAGGCACTGGAAGAAGAGCTGGCCGAGTGGCTTGGCTATTCGCGGGCACTGCTGTTTATCTCTGGTTTCGCCGCTAATCAGGCAGTTATTGCCGCGATGATGGCGAAAGAGGACCGTATTGCTGCCGACCGGCTTAGCCATGCCTCATTGCTGGAAGCTGCCAGTTTAAGCCCGTCGCAGCTTCGCCGTTTTGCTCATAACGATGTCACTCATTTGGCGCGATTGCTTGCTTCCCCCTGTCCGGGGCAGCAAATGGTGGTGACAGAAGGCGTGTTCAGCATGGACGGCGATAGTGCGCCACTGGCGGAAATCCAGCAGGTAACGCAACAGCACAATGGCTGGTTGATGGTCGATGATGCCCACGGCACGGGCGTTATCGGGGAGCAGGGGCGCGGCAGCTGCTGGCTGCAAAAGGTAAAACCAGAATTGCTGGTAGTGACTTTTGGCAAAGGATTTGGCGTCAGCGGGGCAGCGGTGCTTTGCTCCAGTACGGTGGCGGATTATCTGCTGCAATTCGCCCGCCACCTTATCTACAGCACCAGTATGCCGCCCGCTCAGGCGCAGGCATTACGTGCGTCGCTGGCGGTCATTCGCAGTGATGAGGGTGATGCACGGCGCGAAAAACTGGCGGCACTCATTACGCGTTTTCGTGCCGGAGTACAGGATTTGCCGTTTACGCTTGCTGATTCATGCAGCGCCATCCAGCCATTGATTGTCGGTGATAACAGCCGTGCGTTACAACTGGCAGAAAAACTGCGTCAGCAAGGCTGCTGGGTCACGGCGATTCGCCCGCCAACCGTACCCGCTGGTACTGCGCGACTGCGCTTAACGCTAACCGCTGCGCATGAAATGCAGGATATCGACCGTCTGCTGGAGGTGCTGCATGGCAACGGTTAA", - "dna_sequence_length": 1155, - "functions": [ - "8-amino-7-oxononanoate synthase" - ], - "id": "CDS_758", - "location": [ - [ - "NC_000913", - 810381, - "+", - 1155 - ] - ], - "md5": "8eeeb64ebee3a87dd6f681b5022e4e51", - "parent_gene": "", - "protein_md5": "7441f2eeb82631cd04194e5dd4597e39", - "protein_translation": "MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG", - "protein_translation_length": 384, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "bioC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P12999" - ], - [ - "gene_synonym", - "b0777" - ], - [ - "gene_synonym", - "GI:16128745" - ], - [ - "gene_synonym", - "ECK0766" - ], - [ - "gene_synonym", - "NP_415298.1" - ], - [ - "gene_synonym", - "EcoGene:EG10119" - ], - [ - "gene_synonym", - "ASAP:ABE-0002648" - ], - [ - "gene_synonym", - "GeneID:945388" - ], - [ - "gene_synonym", - "JW0760" - ] - ], - "dna_sequence": "ATGGCAACGGTTAATAAACAAGCCATTGCAGCGGCATTTGGTCGGGCAGCCGCACACTATGAGCAACATGCAGATCTACAGCGCCAGAGTGCTGACGCCTTACTGGCAATGCTTCCACAGCGTAAATACACCCACGTACTGGACGCGGGTTGTGGACCTGGCTGGATGAGCCGCCACTGGCGGGAACGTCACGCGCAGGTGACGGCCTTAGATCTCTCGCCGCCAATGCTTGTTCAGGCACGCCAGAAGGATGCCGCAGACCATTATCTGGCGGGAGATATCGAATCCCTGCCGTTAGCGACTGCGACGTTCGATCTTGCATGGAGCAATCTCGCAGTGCAGTGGTGCGGTAATTTATCCACGGCACTCCGCGAGCTGTATCGGGTGGTGCGCCCCAAAGGCGTGGTCGCGTTTACCACGCTGGTGCAGGGATCGTTACCCGAACTGCATCAGGCGTGGCAGGCGGTGGACGAGCGTCCGCATGCTAATCGCTTTTTACCGCCAGATGAAATCGAACAGTCGCTGAACGGCGTGCATTATCAACATCATATTCAGCCCATCACGCTGTGGTTTGATGATGCGCTCAGTGCCATGCGTTCGCTGAAAGGCATCGGTGCCACGCATCTTCATGAAGGGCGCGACCCGCGAATATTAACGCGTTCGCAGTTGCAGCGATTGCAACTGGCCTGGCCGCAACAGCAGGGGCGATATCCTCTGACGTATCATCTTTTTTTGGGAGTGATTGCTCGTGAGTAA", - "dna_sequence_length": 756, - "functions": [ - "malonyl-ACP O-methyltransferase, SAM-dependent" - ], - "id": "CDS_759", - "location": [ - [ - "NC_000913", - 811522, - "+", - 756 - ] - ], - "md5": "3ecc2f169a794b85fce5d70410bb8176", - "parent_gene": "", - "protein_md5": "050ade427d2757f7299794e0e575f71e", - "protein_translation": "MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE", - "protein_translation_length": 251, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002650" - ], - [ - "gene_synonym", - "GeneID:945387" - ], - [ - "gene_synonym", - "b0778" - ], - [ - "gene_synonym", - "bioD" - ], - [ - "gene_synonym", - "EcoGene:EG10120" - ], - [ - "gene_synonym", - "GI:16128746" - ], - [ - "gene_synonym", - "JW0761" - ], - [ - "gene_synonym", - "ECK0767" - ], - [ - "gene_synonym", - "NP_415299.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P13000" - ] - ], - "dna_sequence": "GTGAGTAAACGTTATTTTGTCACCGGAACGGATACCGAAGTGGGGAAAACTGTCGCCAGTTGTGCACTTTTACAAGCCGCAAAGGCAGCAGGCTACCGGACGGCAGGTTATAAACCGGTCGCCTCTGGCAGCGAAAAGACCCCGGAAGGTTTACGCAATAGCGACGCGCTGGCGTTACAGCGCAACAGCAGCCTGCAGCTGGATTACGCAACAGTAAATCCTTACACCTTCGCAGAACCCACTTCGCCGCACATCATCAGCGCGCAAGAGGGCAGACCGATAGAATCATTGGTAATGAGCGCCGGATTACGCGCGCTTGAACAACAGGCTGACTGGGTGTTAGTGGAAGGTGCTGGCGGCTGGTTTACGCCGCTTTCTGACACTTTCACTTTTGCAGATTGGGTAACACAGGAACAACTGCCGGTGATACTGGTAGTTGGTGTGAAACTCGGCTGTATTAATCACGCGATGTTGACTGCACAGGTAATACAACACGCCGGACTGACTCTGGCGGGTTGGGTGGCGAACGATGTTACGCCTCCGGGAAAACGTCACGCTGAATATATGACCACGCTCACCCGCATGATTCCCGCGCCGCTGCTGGGAGAGATCCCCTGGCTTGCAGAAAATCCAGAAAATGCGGCAACCGGAAAGTACATAAACCTTGCCTTGTTGTAG", - "dna_sequence_length": 678, - "functions": [ - "dethiobiotin synthetase" - ], - "id": "CDS_760", - "location": [ - [ - "NC_000913", - 812270, - "+", - 678 - ] - ], - "md5": "e55b8450498478058b29596b71da66cf", - "parent_gene": "", - "protein_md5": "9e7702ff6296c49969a189db562d111c", - "protein_translation": "MSKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQVIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL", - "protein_translation_length": 225, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "dar-1" - ], - [ - "gene_synonym", - "EcoGene:EG11062" - ], - [ - "gene_synonym", - "b0779" - ], - [ - "gene_synonym", - "dar-6" - ], - [ - "gene_synonym", - "GeneID:945385" - ], - [ - "gene_synonym", - "JW0762" - ], - [ - "gene_synonym", - "GI:16128747" - ], - [ - "gene_synonym", - "uvrB" - ], - [ - "gene_synonym", - "NP_415300.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002658" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8F8" - ], - [ - "gene_synonym", - "ECK0768" - ] - ], - "dna_sequence": "ATGAGTAAACCGTTCAAACTGAATTCCGCTTTTAAACCTTCTGGCGATCAGCCAGAGGCGATTCGACGTCTCGAAGAGGGGCTGGAAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAACAAAACGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATGCGTTTGTCCGCCACCAAAGCGATGCTGGAGCGGCGTGATGTGGTTGTGGTGGCGTCTGTTTCCGCGATTTATGGTCTGGGCGATCCTGATTTATATCTCAAGATGATGCTCCATCTCACGGTCGGTATGATTATCGATCAGCGCGCGATTCTGCGCCGACTGGCGGAGCTGCAATACGCTCGTAATGATCAAGCATTCCAGCGTGGTACTTTCCGCGTTCGTGGCGAGGTGATAGATATCTTCCCGGCAGAATCGGATGACATTGCACTTCGCGTGGAACTGTTTGACGAGGAAGTGGAACGATTGTCGTTATTTGACCCGCTGACCGGGCAGATTGTTTCCACTATTCCACGTTTTACCATCTACCCGAAAACGCACTACGTCACACCGCGCGAGCGCATCGTACAGGCGATGGAGGAGATCAAAGAAGAGCTGGCCGCCAGACGCAAAGTGCTGTTGGAAAACAACAAACTGCTGGAAGAGCAGCGGCTGACCCAGCGTACCCAGTTTGATCTGGAGATGATGAACGAGCTGGGCTACTGTTCGGGGATTGAAAACTACTCGCGCTTCCTCTCCGGTCGTGGACCGGGTGAGCCACCGCCGACGCTGTTTGATTACCTGCCTGCCGATGGGCTGCTGGTCGTCGATGAATCTCACGTCACCATTCCACAAATTGGCGGCATGTATCGCGGTGACCGGGCGCGTAAAGAGACACTGGTGGAGTACGGCTTCCGCCTGCCATCAGCGCTGGATAACCGTCCGCTTAAGTTTGAAGAGTTCGAAGCATTAGCGCCGCAAACCATCTATGTTTCGGCGACGCCGGGTAATTACGAGCTGGAAAAATCCGGCGGCGATGTGGTGGATCAGGTGGTGCGTCCAACCGGATTGCTTGACCCGATTATCGAAGTGCGGCCGGTGGCGACACAGGTTGATGATCTTCTTTCGGAGATTCGTCAGCGAGCGGCAATTAACGAACGCGTACTGGTCACCACACTGACCAAGCGGATGGCGGAAGATCTTACCGAATATCTCGAAGAACATGGCGAGCGCGTGCGTTATCTTCACTCAGATATCGACACCGTCGAACGTATGGAGATTATCCGCGACTTGCGTCTGGGTGAGTTCGACGTGCTGGTAGGGATCAACTTACTGCGCGAAGGTCTGGATATGCCGGAAGTGTCGCTGGTGGCGATCCTCGACGCTGACAAAGAAGGCTTCCTGCGTTCCGAACGTTCGTTGATCCAGACCATTGGTCGTGCGGCACGTAACGTTAACGGTAAAGCGATTCTCTACGGCGATAAGATCACCCCATCAATGGCGAAAGCGATTGGCGAAACCGAACGTCGCCGTGAGAAACAGCAGAAGTACAACGAGGAACACGGAATTACGCCGCAAGGCTTGAACAAGAAAGTGGTCGATATCCTGGCGCTGGGGCAGAACATTGCCAAAACCAAAGCGAAGGGCAGAGGAAAATCGCGCCCGATTGTTGAGCCGGATAATGTGCCGATGGATATGTCGCCTAAAGCGTTGCAGCAGAAAATCCATGAGCTGGAAGGGTTGATGATGCAACACGCGCAGAATCTGGAGTTCGAAGAAGCGGCGCAAATTCGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAA", 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"MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS", - "protein_translation_length": 673, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0780" - ], - [ - "gene_synonym", - "EcoGene:EG13667" - ], - [ - "gene_synonym", - "GI:16128748" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75767" - ], - [ - "gene_synonym", - "JW0763" - ], - [ - "gene_synonym", - "NP_415301.1" - ], - [ - "gene_synonym", - "ybhK" - ], - [ - "gene_synonym", - "ASAP:ABE-0002661" - ], - [ - "gene_synonym", - "GeneID:945390" - ], - [ - "gene_synonym", - "ECK0769" - ] - ], - "dna_sequence": "ATGCGCAATCGTACGCTGGCTGATCTTGATCGTGTCGTTGCTCTCGGCGGAGGGCATGGACTGGGACGCGTTCTCTCATCACTTTCGTCTTTGGGTTCTCGTTTAACGGGTATCGTCACCACCACCGATAATGGTGGCTCGACGGGGCGTATTCGCCGTTCAGAAGGCGGCATTGCCTGGGGCGATATGCGCAACTGCCTCAACCAGCTGATAACGGAACCGAGCGTCGCCTCCGCGATGTTTGAATACCGTTTTGGTGGCAATGGCGAACTTTCCGGTCATAATCTCGGAAACTTGATGTTAAAGGCGCTGGATCACCTTAGCGTGCGGCCTCTGGAAGCCATCAATTTAATTCGTAATCTGCTGAAAGTGGATACGCATTTGATTCCAATGTCAGAGCATCCTGTTGATCTGATGGCGATTGACGATCAGGGGCATGAAGTTTACGGCGAGGTCAATATCGACCAGTTAACTACGCCGATTCAAGAGTTATTGTTAACGCCTAATGTACCCGCAACGCGTGAGGCGGTTCACGCTATCAATGAAGCGGATCTCATCATTATTGGGCCTGGCAGTTTTTATACCAGCCTGATGCCAATTCTGCTGCTGAAGGAAATCGCCCAGGCATTACGCCGCACGCCAGCGCCGATGGTTTATATCGGCAATCTGGGGCGTGAGTTGAGTTTACCTGCGGCTAATTTGAAGCTGGAAAGCAAGCTGGCAATTATGGAGCAGTATGTTGGTAAAAAGGTCATTGATGCGGTCATCGTCGGGCCAAAAGTGGATGTCTCGGCGGTGAAAGAGCGGATTGTGATCCAGGAGGTACTGGAGGCCAGCGATATTCCGTATCGTCATGACCGCCAGTTGTTACATAACGCGCTGGAAAAGGCGTTACAGGCTTTAGGTTAA", - "dna_sequence_length": 909, - "functions": [ - "putative CofD superfamily transferase" - ], - "id": "CDS_762", - "location": [ - [ - "NC_000913", - 816647, - "-", - 909 - ] - ], - "md5": "1139488a0cf4f67633bfac3b38859499", - "parent_gene": "", - "protein_md5": "1ecffde042eb451537578d672b06669e", - "protein_translation": "MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG", - "protein_translation_length": 302, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30745" - ], - [ - "gene_synonym", - "b0781" - ], - [ - "gene_synonym", - "GI:16128749" - ], - [ - "gene_synonym", - "chlA" - ], - [ - "gene_synonym", - "EcoGene:EG11595" - ], - [ - "gene_synonym", - "JW0764" - ], - [ - "gene_synonym", - "ECK0770" - ], - [ - "gene_synonym", - "moaA" - ], - [ - "gene_synonym", - "GeneID:945392" - ], - [ - "gene_synonym", - "NP_415302.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002669" - ], - [ - "gene_synonym", - "narA" - ], - [ - "gene_synonym", - "bisA" - ] - ], - "dna_sequence": "ATGGCTTCACAACTGACTGATGCATTTGCGCGTAAGTTTTACTACTTGCGCCTGTCGATTACCGATGTGTGTAACTTTCGTTGCACCTACTGCCTGCCGGATGGCTACAAACCGAGCGGCGTCACCAATAAAGGCTTTCTTACCGTCGATGAAATTCGCCGGGTTACGCGCGCCTTCGCCAGACTGGGCACCGAAAAAGTGCGCCTGACAGGAGGAGAGCCGTCTTTACGCCGCGACTTTACCGATATCATCGCCGCTGTGCGGGAAAACGACGCTATCCGCCAGATTGCGGTCACAACCAATGGTTACCGTCTGGAACGCGATGTGGCGAGCTGGCGCGATGCGGGACTTACTGGCATTAACGTCAGTGTCGACAGTCTGGACGCCCGCCAGTTTCACGCTATTACCGGGCAGGATAAATTCAACCAGGTCATGGCAGGGATTGATGCTGCATTTGAGGCCGGTTTTGAGAAGGTCAAAGTCAATACCGTGCTGATGCGTGATGTTAATCATCACCAGCTCGACACCTTTCTGAACTGGATCCAGCATCGCCCTATCCAGCTGCGTTTCATCGAACTGATGGAAACGGGCGAGGGCAGCGAGCTCTTCCGTAAGCATCACATCTCTGGTCAGGTTCTGCGTGACGAGCTACTGCGTCGCGGCTGGATCCACCAATTACGTCAACGCAGCGACGGTCCCGCGCAAGTCTTTTGCCATCCAGATTACGCCGGAGAGATTGGCCTTATCATGCCGTATGAAAAAGACTTCTGCGCCACTTGCAACCGCCTGCGCGTTTCCTCCATTGGTAAACTCCATCTCTGCCTGTTTGGTGAAGGCGGCGTTAACCTGCGCGATCTGCTGGAAGACGATACCCAGCAACAGGCGCTGGAAGCGCGTATTTCAGCGGCGCTGCGGGAGAAGAAACAGACCCATTTCCTGCATCAAAACAACACCGGTATTACGCAAAACTTATCGTACATTGGCGGCTAA", - "dna_sequence_length": 990, - "functions": [ - "molybdopterin biosynthesis protein A" - ], - "id": "CDS_763", - "location": [ - [ - "NC_000913", - 817044, - "+", - 990 - ] - ], - "md5": "137d399a64b406556084614bec8b8852", - "parent_gene": "", - "protein_md5": "92388a53bbea7cbbdc5d38d153fe733e", - "protein_translation": "MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNKGFLTVDEIRRVTRAFARLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNGYRLERDVASWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELLRRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLFGEGGVNLRDLLEDDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG", - "protein_translation_length": 329, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0782" - ], - [ - "gene_synonym", - "NP_415303.1" - ], - [ - "gene_synonym", - "GI:16128750" - ], - [ - "gene_synonym", - "moaB" - ], - [ - "gene_synonym", - "JW0765" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEZ9" - ], - [ - "gene_synonym", - "ECK0771" - ], - [ - "gene_synonym", - "ASAP:ABE-0002671" - ], - [ - "gene_synonym", - "EcoGene:EG11596" - ], - [ - "gene_synonym", - "GeneID:945396" - ] - ], - "dna_sequence": "ATGAGTCAGGTAAGCACTGAATTTATCCCGACCCGTATTGCTATTCTTACGGTTTCTAATCGTCGCGGTGAAGAAGACGATACCTCCGGTCACTATCTGCGCGATTCGGCGCAAGAAGCGGGCCATCACGTTGTCGATAAAGCCATTGTGAAAGAAAACCGCTACGCTATTCGCGCTCAGGTATCTGCGTGGATCGCCAGCGACGATGTACAAGTGGTATTGATTACGGGTGGTACTGGCCTGACGGAAGGTGATCAGGCTCCCGAAGCATTGCTGCCGTTGTTCGACCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGCTGGATGCCCGTACGCGTCCGTGTAATTTCCATCCACATTTGAAGAAATAA", - "dna_sequence_length": 513, - "functions": [ - "inactive molybdopterin adenylyltransferase" - ], - "id": "CDS_764", - "location": [ - [ - "NC_000913", - 818055, - "+", - 513 - ] - ], - "md5": "04a8b9f0f42648cfe5e069e37f10b241", - "parent_gene": "", - "protein_md5": "1d192ad9a2cf2749c9862f362feb18bc", - "protein_translation": "MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGFGEVFRMLSFEEIGTSTLQSRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTRPCNFHPHLKK", - "protein_translation_length": 170, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0783" - ], - [ - "gene_synonym", - "GI:16128751" - ], - [ - "gene_synonym", - "moaC" - ], - [ - "gene_synonym", - "JW0766" - ], - [ - "gene_synonym", - "ECK0772" - ], - [ - "gene_synonym", - "EcoGene:EG11666" - ], - [ - "gene_synonym", - "NP_415304.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A738" - ], - [ - "gene_synonym", - "ASAP:ABE-0002673" - ], - [ - "gene_synonym", - "GeneID:945397" - ] - ], - "dna_sequence": "ATGTCGCAACTGACCCATATCAACGCCGCTGGCGAAGCGCACATGGTGGATGTCTCCGCCAAAGCGGAAACCGTGCGTGAAGCGCGGGCGGAAGCCTTTGTCACCATGCGCAGCGAGACGCTGGCGATGATTATTGATGGTCGCCACCACAAAGGCGACGTATTTGCCACTGCGCGTATTGCCGGTATTCAGGCGGCAAAACGCACCTGGGATCTGATCCCGCTCTGTCATCCGCTGATGCTCAGCAAAGTTGAAGTCAATTTACAGGCCGAGCCGGAGCACAATCGGGTGCGTATAGAAACCTTATGCCGCCTGACCGGGAAAACCGGTGTCGAAATGGAAGCATTAACCGCGGCCTCCGTGGCGGCGCTGACCATTTATGACATGTGCAAAGCGGTGCAAAAAGATATGGTGATTGGTCCGGTACGTTTGCTGGCGAAGAGCGGCGGCAAGTCGGGTGACTTTAAGGTGGAAGCGGATGATTAA", - "dna_sequence_length": 486, - "functions": [ - "molybdopterin biosynthesis, protein C" - ], - "id": "CDS_765", - "location": [ - [ - "NC_000913", - 818570, - "+", - 486 - ] - ], - "md5": "921a18b5ac4786c648099ada20d91270", - "parent_gene": "", - "protein_md5": "96aaeda2e4331957aa280da4475fd18d", - "protein_translation": "MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMIIDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETLCRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEADD", - "protein_translation_length": 161, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128752" - ], - [ - "gene_synonym", - "chlM" - ], - [ - "gene_synonym", - "ECK0773" - ], - [ - "gene_synonym", - "moaD" - ], - [ - "gene_synonym", - "JW0767" - ], - [ - "gene_synonym", - "EcoGene:EG11597" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30748" - ], - [ - "gene_synonym", - "NP_415305.1" - ], - [ - "gene_synonym", - "GeneID:945398" - ], - [ - "gene_synonym", - "b0784" - ], - [ - "gene_synonym", - "ASAP:ABE-0002675" - ] - ], - "dna_sequence": "ATGATTAAAGTTCTTTTTTTCGCCCAGGTGCGCGAGTTGGTGGGAACAGATGCAACCGAAGTGGCTGCGGATTTCCCAACTGTTGAAGCGTTACGCCAGCACATGGCTGCGCAGAGCGATCGCTGGGCGCTGGCGCTGGAAGATGGCAAATTACTGGCTGCCGTCAACCAGACGCTGGTGAGTTTTGACCATCCGCTGACTGACGGCGACGAAGTAGCTTTCTTCCCGCCGGTAACCGGAGGTTAA", - "dna_sequence_length": 246, - "functions": [ - "molybdopterin synthase, small subunit" - ], - "id": "CDS_766", - "location": [ - [ - "NC_000913", - 819048, - "+", - 246 - ] - ], - "md5": "d998847be3b49c4be907e4537d8a76fb", - "parent_gene": "", - "protein_md5": "4af7f177bfbdcea92812e6292c56fae6", - "protein_translation": "MIKVLFFAQVRELVGTDATEVAADFPTVEALRQHMAAQSDRWALALEDGKLLAAVNQTLVSFDHPLTDGDEVAFFPPVTGG", - "protein_translation_length": 81, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11598" - ], - [ - "gene_synonym", - "JW0768" - ], - [ - "gene_synonym", - "b0785" - ], - [ - "gene_synonym", - "NP_415306.1" - ], - [ - "gene_synonym", - "moaE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30749" - ], - [ - "gene_synonym", - "ASAP:ABE-0002678" - ], - [ - "gene_synonym", - "GeneID:945399" - ], - [ - "gene_synonym", - "ECK0774" - ], - [ - "gene_synonym", - "GI:16128753" - ] - ], - "dna_sequence": "ATGGCAGAAACCAAAATTGTTGTTGGTCCGCAGCCGTTCAGCGTAGGAGAAGAGTACCCGTGGCTGGCGGAGCGTGACGAAGACGGTGCGGTAGTCACCTTTACTGGTAAGGTGCGCAACCATAACCTGGGCGACAGCGTCAACGCATTAACCCTCGAACACTATCCGGGGATGACTGAAAAAGCACTGGCAGAAATTGTTGATGAAGCGCGTAACCGCTGGCCGCTGGGGCGCGTCACTGTGATTCACCGCATCGGGGAATTATGGCCGGGCGATGAAATCGTTTTTGTCGGTGTCACCAGTGCGCATCGCAGCAGTGCGTTTGAAGCCGGGCAGTTTATTATGGATTATCTCAAAACCCGCGCACCGTTCTGGAAGCGCGAAGCCACGCCGGAAGGCGACCGCTGGGTTGAAGCTCGGGAGAGCGATCAGCAGGCGGCAAAACGCTGGTAG", - "dna_sequence_length": 453, - "functions": [ - "molybdopterin synthase, large subunit" - ], - "id": "CDS_767", - "location": [ - [ - "NC_000913", - 819295, - "+", - 453 - ] - ], - "md5": "2ddc38e32531e140014a18859b7fdc59", - "parent_gene": "", - "protein_md5": "b138ca230bc137682d8cb2006075bdfc", - "protein_translation": "MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLGDSVNALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQAAKRW", - "protein_translation_length": 150, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0769" - ], - [ - "gene_synonym", - "b0786" - ], - [ - "gene_synonym", - "ASAP:ABE-0002685" - ], - [ - "gene_synonym", - "GI:16128754" - ], - [ - "gene_synonym", - "ybhL" - ], - [ - "gene_synonym", - "GeneID:945401" - ], - [ - "gene_synonym", - "NP_415307.1" - ], - [ - "gene_synonym", - "ECK0775" - ], - [ - "gene_synonym", - "EcoGene:EG13668" - ], - [ - "gene_synonym", - "aceP" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAC4" - ] - ], - "dna_sequence": "ATGGACAGATTCCCACGTTCTGATTCAATCGTACAACCCCGGGCTGGCTTGCAAACTTATATGGCTCAAGTCTATGGCTGGATGACCGTTGGCTTGTTGCTGACCGCATTTGTTGCCTGGTATGCGGCTAATTCCGCGGCCGTGATGGAGCTGTTGTTCACTAACCGTGTCTTTTTAATCGGTCTGATCATCGCGCAATTAGCATTGGTTATTGTGTTATCAGCGATGATTCAAAAGCTGAGCGCAGGTGTAACGACGATGCTCTTTATGCTTTATTCGGCGCTGACGGGTCTTACGCTTTCCAGTATATTCATTGTCTATACCGCTGCTTCTATCGCCAGTACTTTCGTCGTTACTGCCGGGATGTTCGGCGCAATGAGCCTGTACGGTTACACCACGAAGCGCGATTTAAGTGGCTTTGGCAATATGCTGTTTATGGCGTTAATCGGCATTGTGCTGGCATCGCTGGTCAACTTCTGGTTGAAAAGCGAAGCATTGATGTGGGCAGTTACCTACATCGGCGTGATTGTCTTTGTCGGATTGACGGCGTATGACACGCAGAAACTGAAAAATATGGGTGAGCAGATTGATACCCGCGACACGTCGAACCTGCGCAAATATTCCATTCTTGGCGCGTTAACCTTGTATCTGGACTTCATCAACCTGTTCCTGATGTTGTTGCGGATCTTCGGCAACCGCCGTTAA", - "dna_sequence_length": 705, - "functions": [ - "putative acetate transporter", - "BAX Inhibitor-1 family inner membrane protein" - ], - "id": "CDS_768", - "location": [ - [ - "NC_000913", - 819884, - "+", - 705 - ] - ], - "md5": "d0396baf06e5867f6c87aa12db8c1b22", - "parent_gene": "", - "protein_md5": "579da4df312700556fdc4b955f97e77e", - "protein_translation": "MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAANSAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSSIFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFWLKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLDFINLFLMLLRIFGNRR", - "protein_translation_length": 234, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415308.1" - ], - [ - "gene_synonym", - "b0787" - ], - [ - "gene_synonym", - "JW0770" - ], - [ - "gene_synonym", - "GI:16128755" - ], - [ - "gene_synonym", - "ybhM" - ], - [ - "gene_synonym", - "ECK0776" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75769" - ], - [ - "gene_synonym", - "EcoGene:EG13669" - ], - [ - "gene_synonym", - "GeneID:949001" - ], - [ - "gene_synonym", - "ASAP:ABE-0002688" - ] - ], - "dna_sequence": "ATGGAATCATACTCGCAAAACAGCAATAAATTAGATTTTCAGCACGAGGCCAGGATATTAAACGGTATATGGCTCATTACCGCTTTAGGTTTGGTGGCAACCGCAGGACTAGCCTGGGGAGCTAAGTATATCGAAATTACGGCAACCAAATATGATTCACCACCAATGTATGTCGCCATAGGGTTATTATTACTTTGTATGTATGGCTTAAGTAAGGATATCAACAAGATAAATGCCGCCATCGCGGGCGTAATATATCTGTTTTTACTCTCTTTGGTGGCGATTGTCGTTGCAAGTTTAGTTCCTGTATATGCCATTATCATCGTGTTCAGCACTGCGGGCGCGATGTTTTTAATCAGTATGCTGGCCGGTTTATTATTTAATGTTGATCCTGGTTCTCACCGTTTTATCATTATGATGACGTTGACAGGGTTGGCCCTGGTAATCATCGTGAATGCGGCATTAATGAGTGAACGGCCCATTTGGATAATAAGTTGCTTAATGATTGTGTTATGGTCAGGCATTATCTCGCATGGACGAAATAAGCTCCTTGAATTGGCGGGGAAATGCCATAGTGAAGAGTTGTGGAGTCCGGTTCGTTGCGCTTTTACAGGTGCATTAACACTCTATTACTATTTTATCGGCTTCTTTGGGATACTTGCCGCGATAGCTATAACGCTTGTCTGGCAAAGGCATACGCGTTTTTTTCATTAG", - "dna_sequence_length": 714, - "functions": [ - "BAX Inhibitor-1 family inner membrane protein" - ], - "id": "CDS_769", - "location": [ - [ - "NC_000913", - 820793, - "+", - 714 - ] - ], - "md5": "fe3a022b6d4c3d274ddea47c7d5e2e1a", - "parent_gene": "", - "protein_md5": "d69537d5727e3ebfaa0b968df3f9b164", - "protein_translation": "MESYSQNSNKLDFQHEARILNGIWLITALGLVATAGLAWGAKYIEITATKYDSPPMYVAIGLLLLCMYGLSKDINKINAAIAGVIYLFLLSLVAIVVASLVPVYAIIIVFSTAGAMFLISMLAGLLFNVDPGSHRFIIMMTLTGLALVIIVNAALMSERPIWIISCLMIVLWSGIISHGRNKLLELAGKCHSEELWSPVRCAFTGALTLYYYFIGFFGILAAIAITLVWQRHTRFFH", - "protein_translation_length": 237, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75770" - ], - [ - "gene_synonym", - "b0788" - ], - [ - "gene_synonym", - "GeneID:945410" - ], - [ - "gene_synonym", - "NP_415309.1" - ], - [ - "gene_synonym", - "EcoGene:EG13670" - ], - [ - "gene_synonym", - "GI:16128756" - ], - [ - "gene_synonym", - "JW0771" - ], - [ - "gene_synonym", - "ybhN" - ], - [ - "gene_synonym", - "ECK0777" - ], - [ - "gene_synonym", - "ASAP:ABE-0002690" - ] - ], - "dna_sequence": "ATGAGTAAATCACACCCGCGCTGGCGCTTAGCAAAGAAGATCCTCACCTGGCTGTTTTTTATCGCGGTGATTGTGTTGCTGGTGGTCTACGCCAAAAAAGTGGACTGGGAAGAGGTCTGGAAGGTCATCCGCGACTACAATCGCGTTGCGCTGCTTAGTGCGGTCGGGCTGGTGGTCGTCAGCTATCTGATTTACGGCTGCTATGACCTGCTCGCCCGCTTTTACTGCGGTCACAAACTGGCGAAGCGCCAGGTGATGCTGGTGTCGTTTATCTGCTACGCCTTCAACCTGACGCTCAGTACCTGGGTCGGCGGCATTGGTATGCGCTATCGTTTGTACTCTCGTCTGGGGTTGCCCGGTAGCACTATTACGCGGATTTTCTCGCTCAGTATTACCACCAACTGGCTGGGCTACATTTTACTGGCAGGGATTATCTTTACCGCAGGCGTGGTGGAGTTGCCGGATCACTGGTATGTCGATCAAACTACGCTGCGTATTCTCGGCATTGGCTTACTGATGATTATCGCGGTTTATTTGTGGTTTTGCGCTTTCGCGAAGCACCGCCATATGACCATCAAAGGGCAAAAGCTGGTGCTGCCTTCATGGAAATTCGCCCTCGCTCAGATGCTGATTTCCAGCGTTAACTGGATGGTAATGGGGGCGATTATCTGGCTGTTACTTGGTCAAAGCGTGAACTATTTCTTTGTACTGGGCGTGTTACTGGTTAGTAGTATTGCTGGCGTCATCGTGCATATTCCGGCGGGGATCGGTGTGCTGGAAGCGGTGTTTATCGCACTACTGGCTGGGGAGCATACCTCCAAAGGTACAATTATCGCCGCCCTACTCGCTTACCGTGTGCTGTATTACTTTATCCCACTGCTGCTGGCGCTGATCTGTTACCTGTTGCTGGAAAGCCAGGCGAAGAAGCTACGGGCGAAAAATGAAGCGGCGATGTGA", - "dna_sequence_length": 957, - "functions": [ - "UPF0104 family inner membrane protein" - ], - "id": "CDS_770", - "location": [ - [ - "NC_000913", - 822498, - "-", - 957 - ] - ], - "md5": "72824bb6a1f8e99c9b9d370b22210933", - "parent_gene": "", - "protein_md5": "ec3883b2b802d77e6dc8f349e24f9136", - "protein_translation": "MSKSHPRWRLAKKILTWLFFIAVIVLLVVYAKKVDWEEVWKVIRDYNRVALLSAVGLVVVSYLIYGCYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVDQTTLRILGIGLLMIIAVYLWFCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMVMGAIIWLLLGQSVNYFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGTIIAALLAYRVLYYFIPLLLALICYLLLESQAKKLRAKNEAAM", - "protein_translation_length": 318, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415310.1" - ], - [ - "gene_synonym", - "b0789" - ], - [ - "gene_synonym", - "JW0772" - ], - [ - "gene_synonym", - "ybhO" - ], - [ - "gene_synonym", - "GI:16128757" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA84" - ], - [ - "gene_synonym", - "clsB" - ], - [ - "gene_synonym", - "ASAP:ABE-0002692" - ], - [ - "gene_synonym", - "ECK0778" - ], - [ - "gene_synonym", - "EcoGene:EG13671" - ], - [ - "gene_synonym", - "GeneID:945409" - ] - ], - "dna_sequence": "ATGAAATGTAGCTGGCGCGAAGGCAATAAGATCCAGTTGCTGGAAAACGGCGAGCAATATTATCCCGCGGTGTTTAAGGCGATTGGCGAGGCACAAGAACGCATCATTCTTGAAACGTTTATCTGGTTTGAGGATGACGTCGGCAAACAACTGCATGCGGCACTACTGGCAGCAGCGCAACGCGGGGTTAAAGCGGAAGTCTTGCTGGATGGCTACGGTTCGCCGGATCTCAGCGATGAGTTTGTCAATGAACTGACGGCAGCTGGCGTAGTGTTCCGCTACTACGATCCCCGCCCTCGCCTTTTTGGTATGCGCACCAATGTGTTTCGCCGGATGCATCGCAAAATTGTGGTGATCGACGCGCGTATAGCCTTTATTGGCGGGCTGAATTACTCCGCCGAGCATATGTCCAGCTACGGTCCAGAGGCTAAACAGGATTACGCGGTACGCCTTGAAGGGCCGATTGTCGAAGATATTCTCCAGTTTGAGCTGGAAAACCTGCCTGGACAGAGCGCGGCACGACGCTGGTGGCGACGTCATCACAAAGCGGAAGAGAACCGCCAGCCGGGAGAAGCGCAGGTATTGCTGGTCTGGCGCGATAACGAAGAACATCGCGATGATATTGAACGCCATTATTTGAAAATGCTCACTCAGGCGCGGCGGGAAGTGATTATCGCCAACGCCTACTTCTTCCCCGGCTATCGATTTTTACACGCCTTGCGTAAAGCGGCACGGCGCGGGGTGCGGATCAAACTGATCATTCAGGGCGAACCGGATATGCCGATTGTCAGAGTCGGTGCGCGCTTGCTGTATAACTATCTGGTTAAAGGCGGCGTTCAGGTTTTTGAGTACCGCCGCCGCCCGCTCCACGGCAAAGTGGCATTGATGGACGATCACTGGGCGACAGTAGGGTCCAGTAATCTCGATCCGCTCAGTTTGTCACTGAATCTCGAAGCAAATGTCATCATCCACGATCGTCATTTTAACCAGACGCTGCGCGATAATCTGAACGGCATTATTGCCGCAGATTGTCAGCAGGTGGATGAAACCATGCTGCCCAAACGCACCTGGTGGAACCTGACCAAAAGCGTGCTGGCGTTCCACTTTTTACGCCACTTCCCGGCGCTGGTTGGCTGGCTTCCGGCACACACGCCACGTCTGGCGCAGGTTGATCCGCCCGCACAACCGACAATGGAAACGCAGGATCGGGTAGAAACTGAAAACACGGGGGTAAAACCCTGA", - "dna_sequence_length": 1242, - "functions": [ - "cardiolipin synthase 2" - ], - "id": "CDS_771", - "location": [ - [ - "NC_000913", - 823739, - "-", - 1242 - ] - ], - "md5": "bcb4add0e0beda3c253a62cb64a4b735", - "parent_gene": "", - "protein_md5": "f6a90e84d29d31a77fae7c4ce6d2fe29", - "protein_translation": "MKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFEDDVGKQLHAALLAAAQRGVKAEVLLDGYGSPDLSDEFVNELTAAGVVFRYYDPRPRLFGMRTNVFRRMHRKIVVIDARIAFIGGLNYSAEHMSSYGPEAKQDYAVRLEGPIVEDILQFELENLPGQSAARRWWRRHHKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKMLTQARREVIIANAYFFPGYRFLHALRKAARRGVRIKLIIQGEPDMPIVRVGARLLYNYLVKGGVQVFEYRRRPLHGKVALMDDHWATVGSSNLDPLSLSLNLEANVIIHDRHFNQTLRDNLNGIIAADCQQVDETMLPKRTWWNLTKSVLAFHFLRHFPALVGWLPAHTPRLAQVDPPAQPTMETQDRVETENTGVKP", - "protein_translation_length": 413, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128758" - ], - [ - "gene_synonym", - "GeneID:945408" - ], - [ - "gene_synonym", - "b0790" - ], - [ - "gene_synonym", - "JW0773" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAW1" - ], - [ - "gene_synonym", - "EcoGene:EG13672" - ], - [ - "gene_synonym", - "ybhP" - ], - [ - "gene_synonym", - "ASAP:ABE-0002696" - ], - [ - "gene_synonym", - "NP_415311.1" - ], - [ - "gene_synonym", - "ECK0779" - ] - ], - "dna_sequence": "ATGCCCGATCAAACACAACAATTTTCGTTCAAGGTGCTCACCATCAATATTCACAAAGGCTTTACCGCGTTTAACCGACGCTTCATTTTGCCGGAACTTCGCGACGCCGTGCGTACCGTCAGCGCCGATATTGTTTGCCTGCAGGAAGTGATGGGCGCGCACGAAGTTCATCCGCTGCATGTGGAAAACTGGCCCGATACCTCGCACTACGAGTTTCTCGCCGACACTATGTGGAGCGATTTTGCCTACGGTCGCAATGCCGTATACCCGGAAGGGCATCACGGCAACGCCGTACTGTCGCGTTATCCCATTGAACATTATGAGAATCGCGATGTTTCGGTCGATGGTGCGGAAAAGCGCGGCGTGCTCTACTGCCGCATTGTGCCGCCGATGACCGGAAAAGCGATTCATGTGATGTGCGTACATCTGGGCCTGCGTGAGGCGCACCGTCAGGCGCAGCTTGCGATGCTCGCCGAATGGGTGAATGAGCTACCGGACGGCGAACCGGTATTGGTGGCGGGTGATTTCAATGACTGGCGGCAAAAAGCTAATCATCCGTTAAAAGTGCAGGCCGGACTGGATGAGATTTTTACCCGCGCCCACGGACGCCCGGCGCGCACGTTTCCGGTGCAATTTCCTCTACTACGACTGGACAGGATCTACGTCAAAAATGCCAGCGCCAGCGCGCCAACCGCGTTGCCGCTGCGGACATGGCGACACCTTTCTGATCATGCCCCTTTAAGTGCGGAGATTCATTTATGA", - "dna_sequence_length": 762, - "functions": [ - "endo/exonuclease/phosphatase family protein" - ], - "id": "CDS_772", - "location": [ - [ - "NC_000913", - 824497, - "-", - 762 - ] - ], - "md5": "be091b627acc99bc66c5618d7ab1d9c3", - "parent_gene": "", - "protein_md5": "7594e119ffe8456710f27d137885e84c", - "protein_translation": "MPDQTQQFSFKVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEVMGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPARTFPVQFPLLRLDRIYVKNASASAPTALPLRTWRHLSDHAPLSAEIHL", - "protein_translation_length": 253, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128759" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAW5" - ], - [ - "gene_synonym", - "b0791" - ], - [ - "gene_synonym", - "ybhQ" - ], - [ - "gene_synonym", - "JW0774" - ], - [ - "gene_synonym", - "EcoGene:EG13673" - ], - [ - "gene_synonym", - "NP_415312.1" - ], - [ - "gene_synonym", - "GeneID:945405" - ], - [ - "gene_synonym", - "ASAP:ABE-0002699" - ], - [ - "gene_synonym", - "ECK0780" - ] - ], - "dna_sequence": "ATGAAGTGGCAACAACGTGTTCGTGTCGCAACGGGTCTAAGTTGCTGGCAGATTATGTTGCATTTACTGGTAGTGGCGCTGCTGGTGGTGGGCTGGATGAGTAAGACTCTGGTTCACGTCGGCGTGGGATTATGCGCACTGTATTGTGTCACGGTAGTGATGATGCTGGTGTTTCAGCGCCACCCCGAGCAACGCTGGCGTGAGGTGGCAGACGTGCTGGAAGAGCTGACCACGACCTGGTATTTTGGCGCAGCGCTGATTGTGCTGTGGCTGTTGTCCCGCGTTCTGGAAAACAACTTTTTGCTGGCAATTGCAGGGCTGGCAATCCTTGCCGGCCCGGCGGTAGTGTCTTTGCTGGCGAAAGATAAGAAGTTACATCACCTTACGTCTAAACATCGCGTACGCCGCTGA", - "dna_sequence_length": 411, - "functions": [ - "inner membrane protein" - ], - "id": "CDS_773", - "location": [ - [ - "NC_000913", - 824630, - "+", - 411 - ] - ], - "md5": "877d753fc0040f5e9a18fd917db2c554", - "parent_gene": "", - "protein_md5": "d0c938714fedc9b781bf354ec1a5aaf0", - "protein_translation": "MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGLCALYCVTVVMMLVFQRHPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLLAIAGLAILAGPAVVSLLAKDKKLHHLTSKHRVRR", - "protein_translation_length": 136, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002701" - ], - [ - "gene_synonym", - "b0792" - ], - [ - "gene_synonym", - "JW5803" - ], - [ - "gene_synonym", - "NP_415313.1" - ], - [ - "gene_synonym", - "EcoGene:EG13674" - ], - [ - "gene_synonym", - "ybhR" - ], - [ - "gene_synonym", - "GeneID:945403" - ], - [ - "gene_synonym", - "GI:16128760" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFP9" - ], - [ - "gene_synonym", - "ECK0781" - ] - ], - "dna_sequence": "ATGTTTCATCGCTTATGGACGTTAATCCGCAAAGAGTTGCAGTCGTTGCTGCGCGAACCGCAAACCCGCGCGATTCTGATTTTACCCGTGCTAATTCAGGTGATCCTGTTCCCGTTCGCCGCCACGCTGGAAGTGACTAACGCCACCATCGCCATCTACGATGAAGATAACGGCGAGCATTCGGTGGAGCTGACCCAACGTTTTGCCCGCGCCAGCGCCTTTACTCATGTGCTGCTGCTGAAAAGCCCACAGGAGATCCGCCCAACCATCGACACACAAAAGGCGTTACTACTGGTGCGTTTCCCGGCTGACTTCTCGCGCAAACTGGATACCTTCCAGACCGCGCCTTTGCAGTTGATCCTCGACGGGCGTAACTCCAACAGTGCGCAAATTGCCGCCAACTACCTGCAACAGATCGTCAAAAATTATCAGCAGGAGCTGCTGGAAGGAAAACCGAAACCTAACAACAGCGAGCTGGTGGTACGCAACTGGTATAACCCGAATCTCGACTACAAATGGTTTGTGGTGCCGTCACTGATCGCCATGATCACCACTATCGGCGTAATGATCGTCACTTCACTTTCCGTCGCCCGCGAACGTGAACAAGGTACGCTCGATCAGCTACTGGTTTCGCCGCTCACCACCTGGCAGATCTTCATCGGCAAAGCCGTACCGGCGTTAATTGTCGCCACCTTCCAGGCCACCATTGTGCTGGCGATTGGTATCTGGGCGTATCAAATCCCCTTCGCCGGATCGCTGGCGCTGTTCTACTTTACGATGGTGATTTATGGTTTATCGCTGGTGGGATTCGGTCTGTTGATTTCATCACTCTGTTCAACACAACAGCAGGCGTTTATCGGCGTGTTTGTCTTTATGATGCCCGCCATTCTCCTTTCCGGTTACGTTTCTCCGGTGGAAAACATGCCGGTATGGCTGCAAAACCTGACGTGGATTAACCCTATTCGCCACTTTACGGACATTACCAAGCAGATTTATTTGAAGGATGCGAGTCTGGATATTGTGTGGAATAGTTTGTGGCCGCTACTGGTGATAACGGCCACGACAGGGTCAGCGGCGTACGCGATGTTTAGACGTAAGGTGATGTAA", - "dna_sequence_length": 1107, - "functions": [ - "putative ABC transporter permease" - ], - "id": "CDS_774", - "location": [ - [ - "NC_000913", - 826108, - "-", - 1107 - ] - ], - "md5": "690842d558c79e304fb24f4e63607887", - "parent_gene": "", - "protein_md5": "9cc81d16a4ada6aa83fe23a5941d98e1", - "protein_translation": "MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYDEDNGEHSVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTFQTAPLQLILDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELVVRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM", - "protein_translation_length": 368, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415314.1" - ], - [ - "gene_synonym", - "b0793" - ], - [ - "gene_synonym", - "ASAP:ABE-0002703" - ], - [ - "gene_synonym", - "EcoGene:EG13675" - ], - [ - "gene_synonym", - "GeneID:945411" - ], - [ - "gene_synonym", - "JW0777" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFQ2" - ], - [ - "gene_synonym", - "ybhS" - ], - [ - "gene_synonym", - "ECK0782" - ], - [ - "gene_synonym", - "GI:16128761" - ] - ], - "dna_sequence": "ATGAGTAACCCGATCCTGTCCTGGCGTCGCGTACGGGCGCTGTGCGTTAAAGAGACGCGGCAGATCGTTCGCGATCCGAGTAGCTGGCTGATTGCGGTAGTGATCCCGCTGCTACTGCTGTTTATTTTTGGTTACGGCATTAACCTCGACTCCAGCAAGCTGCGGGTCGGGATTTTACTGGAACAGCGTAGCGAAGCGGCGCTGGATTTCACCCACACCATGACCGGTTCGCCCTACATCGACGCCACCATCAGCGATAACCGTCAGGAACTGATCGCCAAAATGCAGGCGGGGAAAATTCGCGGTCTGGTGGTTATTCCGGTGGATTTTGCGGAACAGATGGAGCGCGCCAACGCCACCGCACCGATTCAGGTGATCACCGACGGCAGTGAGCCGAATACCGCTAACTTTGTACAGGGGTATGTCGAAGGGATCTGGCAGATCTGGCAAATGCAGCGAGCGGAGGACAACGGGCAGACTTTTGAACCGCTTATTGATGTACAAACCCGCTACTGGTTTAACCCGGCGGCGATTAGCCAGCACTTCATTATCCCCGGTGCGGTGACCATTATCATGACGGTCATCGGCGCGATTCTCACCTCGCTGGTGGTGGCGCGAGAATGGGAACGCGGCACCATGGAGGCTCTGCTCTCTACGGAGATTACCCGCACGGAACTGCTGCTGTGTAAGCTGATCCCTTATTACTTTCTCGGGATGCTGGCGATGTTGCTGTGTATGCTGGTGTCAGTGTTTATTCTCGGCGTGCCGTATCGCGGGTCGCTGCTGATTCTGTTTTTTATCTCCAGCCTGTTTTTACTCAGTACCCTGGGGATGGGGCTGCTGATTTCCACGATTACCCGCAACCAGTTCAATGCCGCTCAGGTCGCCCTGAACGCCGCTTTTCTGCCGTCGATTATGCTTTCCGGCTTTATTTTTCAGATCGACAGTATGCCCGCGGTGATCCGCGCGGTGACGTACATTATTCCCGCTCGTTATTTCGTCAGCACCCTGCAAAGCCTGTTCCTCGCCGGGAATATTCCAGTGGTGCTGGTGGTAAACGTGCTGTTTTTGATCGCTTCGGCGGTGATGTTTATCGGCCTGACGTGGCTGAAAACCAAACGTCGGCTGGATTAG", - "dna_sequence_length": 1134, - "functions": [ - "putative ABC transporter permease" - ], - "id": "CDS_775", - "location": [ - [ - "NC_000913", - 827252, - "-", - 1134 - ] - ], - "md5": "84cd6caf3a8d918adbe3f0a94d56df4b", - "parent_gene": "", - "protein_md5": "b44cacfa6f04af42d5cc1336e756855c", - "protein_translation": "MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD", - "protein_translation_length": 377, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002707" - ], - [ - "gene_synonym", - "b0794" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9U1" - ], - [ - "gene_synonym", - "EcoGene:EG13314" - ], - [ - "gene_synonym", - "GeneID:945413" - ], - [ - "gene_synonym", - "JW5104" - ], - [ - "gene_synonym", - "NP_415315.4" - ], - [ - "gene_synonym", - "GI:90111168" - ], - [ - "gene_synonym", - "ybhF" - ], - [ - "gene_synonym", - "ECK0783" - ] - ], - "dna_sequence": "ATGAATGATGCCGTTATCACGCTGAACGGCCTGGAAAAACGCTTTCCGGGCATGGACAAGCCCGCCGTCGCGCCGCTCGATTGTACCATTCACGCCGGTTATGTGACGGGGTTGGTGGGGCCGGACGGTGCAGGTAAAACCACGCTGATGCGGATGTTGGCGGGATTACTGAAACCCGACAGCGGCAGTGCCACGGTGATTGGCTTTGATCCGATCAAAAACGACGGCGCGCTGCACGCCGTGCTCGGTTATATGCCGCAGAAATTTGGTCTGTATGAAGATCTCACGGTGATGGAGAACCTCAATCTGTACGCGGATTTGCGCAGCGTCACCGGCGAGGCACGTAAGCAAACTTTTGCTCGCCTGCTGGAGTTTACGTCTCTTGGGCCGTTTACCGGACGCCTGGCGGGCAAGCTCTCCGGTGGGATGAAACAAAAACTCGGTCTGGCCTGTACCCTGGTGGGCGAACCGAAAGTGTTGCTGCTCGATGAACCCGGCGTCGGCGTTGACCCTATCTCACGGCGCGAACTGTGGCAGATGGTGCATGAGCTGGCGGGCGAAGGGATGTTAATCCTCTGGAGTACCTCGTATCTCGACGAAGCCGAGCAGTGCCGTGACGTGTTACTGATGAACGAAGGCGAGTTGCTGTATCAGGGAGAACCAAAAGCCCTGACACAAACCATGGCCGGACGCAGCTTTCTGATGACCAGTCCACACGAGGGCAACCGCAAACTGTTGCAACGCGCCTTGAAACTGCCGCAGGTCAGCGACGGCATGATTCAGGGGAAATCGGTACGTCTGATCCTCAAAAAAGAGGCCACACCAGACGATATTCGCCATGCCGACGGGATGCCGGAAATCAACATCAACGAAACTACGCCGCGTTTTGAAGATGCGTTTATTGATTTGCTGGGCGGTGCCGGAACCTCGGAATCGCCGCTGGGCGCAATATTACATACGGTAGAAGGCACACCCGGCGAGACGGTGATCGAAGCGAAAGAACTGACCAAGAAATTTGGGGATTTTGCCGCCACCGATCACGTCAACTTTGCCGTTAAACGTGGGGAGATTTTTGGTTTGCTGGGGCCAAACGGCGCGGGTAAATCGACCACCTTTAAGATGATGTGCGGTTTGCTGGTGCCGACTTCCGGCCAGGCGCTGGTGCTGGGGATGGATCTGAAAGAGAGTTCCGGTAAAGCGCGCCAGCATCTCGGCTATATGGCGCAAAAATTTTCGCTCTACGGTAACCTGACGGTCGAACAGAATTTACGCTTTTTCTCTGGTGTGTATGGCTTACGCGGTCGGGCGCAGAACGAAAAAATCTCCCGCATGAGCGAGGCGTTCGGCCTGAAAAGTATCGCCTCCCACGCCACCGATGAACTGCCATTAGGTTTTAAACAGCGGCTGGCGCTGGCCTGTTCGCTGATGCATGAACCGGACATTCTGTTTCTCGACGAACCGACTTCCGGCGTTGACCCCCTCACCCGCCGTGAATTTTGGCTGCACATCAACAGCATGGTAGAGAAAGGCGTCACGGTGATGGTCACCACCCACTTTATGGATGAAGCGGAATATTGCGACCGCATCGGCCTGGTGTACCGCGGGAAATTAATCGCCAGCGGCACGCCGGACGATTTGAAAGCACAGTCGGCTAACGATGAGCAACCCGATCCCACCATGGAGCAAGCCTTTATTCAGTTGATCCACGACTGGGATAAGGAGCATAGCAATGAGTAA", - "dna_sequence_length": 1737, - "functions": [ - "putative ABC transporter ATPase" - ], - "id": "CDS_776", - "location": [ - [ - "NC_000913", - 828981, - "-", - 1737 - ] - ], - "md5": "43abbb3576c82bc430f013f3cb953562", - "parent_gene": "", - "protein_md5": "cf1c3c05c2be617a98dc0eca8d54e14a", - "protein_translation": "MNDAVITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKKEATPDDIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVEGTPGETVIEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEKGVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQLIHDWDKEHSNE", - "protein_translation_length": 578, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0779" - ], - [ - "gene_synonym", - "b0795" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75777" - ], - [ - "gene_synonym", - "GeneID:945414" - ], - [ - "gene_synonym", - "EcoGene:EG13315" - ], - [ - "gene_synonym", - "ASAP:ABE-0002709" - ], - [ - "gene_synonym", - "NP_415316.1" - ], - [ - "gene_synonym", - "GI:16128763" - ], - [ - "gene_synonym", - "ybhG" - ], - [ - "gene_synonym", - "ECK0784" - ] - ], - "dna_sequence": "GTGATGAAAAAACCTGTCGTGATCGGATTGGCGGTAGTGGTACTTGCCGCCGTGGTTGCCGGAGGCTACTGGTGGTATCAAAGCCGCCAGGATAACGGCCTGACGCTGTATGGCAACGTGGATATTCGTACGGTAAATCTTAGTTTCCGTGTTGGGGGGCGCGTTGAATCGCTGGCGGTGGACGAAGGTGATGCTATCAAAGCGGGCCAGGTGCTGGGCGAACTGGATCACAAGCCGTATGAGATTGCCCTGATGCAGGCGAAAGCGGGTGTTTCGGTGGCACAGGCGCAGTATGACCTGATGCTTGCCGGGTATCGCAATGAAGAAATCGCTCAGGCCGCCGCAGCGGTGAAACAGGCGCAAGCCGCCTATGACTATGCGCAGAACTTCTATAACCGCCAGCAAGGGTTGTGGAAAAGCCGCACTATTTCGGCAAATGACCTGGAAAATGCCCGCTCCTCGCGCGACCAGGCGCAGGCAACGCTGAAATCAGCACAGGATAAATTGCGTCAGTACCGTTCCGGTAACCGTGAACAGGACATCGCTCAGGCGAAAGCCAGCCTCGAACAGGCGCAGGCGCAACTGGCGCAGGCGGAGTTGAATTTACAGGACTCAACGTTGATAGCCCCGTCTGATGGCACGCTGTTAACGCGCGCGGTGGAGCCAGGCACGGTCCTCAATGAAGGTGGCACGGTGTTTACCGTTTCACTAACGCGTCCGGTGTGGGTGCGCGCTTATGTTGATGAACGTAATCTTGACCAGGCCCAGCCGGGGCGCAAAGTGCTGCTTTATACCGATGGTCGCCCGGACAAGCCGTATCACGGGCAGATTGGTTTCGTTTCGCCGACTGCTGAATTTACCCCGAAAACCGTCGAAACGCCGGATCTGCGTACCGACCTCGTCTATCGCCTGCGTATTGTGGTGACCGACGCCGATGATGCGTTACGCCAGGGAATGCCAGTGACGGTACAATTCGGTGACGAGGCAGGACATGAATGA", - "dna_sequence_length": 999, - "functions": [ - "putative membrane fusion protein (MFP) component of efflux pump, membrane anchor" - ], - "id": "CDS_777", - "location": [ - [ - "NC_000913", - 829972, - "-", - 999 - ] - ], - "md5": "1694daba4d7beab9ae5386b996900e30", - "parent_gene": "", - "protein_md5": "82ef4ef2381aef8561361155f8f2cef1", - "protein_translation": "MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRNEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGDEAGHE", - "protein_translation_length": 332, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12406" - ], - [ - "gene_synonym", - "b0796" - ], - [ - "gene_synonym", - "ASAP:ABE-0002711" - ], - [ - "gene_synonym", - "NP_415317.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACU0" - ], - [ - "gene_synonym", - "GI:162135896" - ], - [ - "gene_synonym", - "GeneID:945421" - ], - [ - "gene_synonym", - "JW0780" - ], - [ - "gene_synonym", - "ybiH" - ], - [ - "gene_synonym", - "ECK0785" - ] - ], - "dna_sequence": "ATGAATAATCCTGCCATGACAATCAAGGGTGAACAGGCGAAAAAACAGCTGATTGCTGCCGCACTGGCGCAGTTTGGTGAATATGGAATGAACGCCACCACTCGCGAGATAGCCGCCCAGGCCGGGCAGAATATCGCTGCCATCACCTACTACTTCGGTTCGAAAGAAGATTTGTACCTCGCCTGCGCCCAGTGGATTGCCGATTTTATTGGCGAGCAGTTCCGTCCGCATGCCGAGGAAGCCGAACGCTTGTTCGCGCAACCACAGCCTGATCGGGCTGCCATCCGTGAACTGATCCTTCGCGCCTGCAGGAACATGATTAAGCTGCTCACCCAGGATGACACCGTCAACCTCAGCAAGTTTATCTCCCGTGAGCAGCTCTCTCCCACGGCAGCCTACCACCTGGTGCACGAACAGGTGATTAGTCCGCTACACAGCCACCTGACACGCCTGATTGCCGCCTGGACCGGCTGCGACGCCAATGACACCCGCATGATCCTTCATACCCATGCGTTGATTGGTGAGATTCTGGCGTTCCGTCTTGGCAAAGAAACAATTCTGTTACGTACCGGCTGGACCGCGTTCGATGAAGAAAAGACCGAACTGATCAACCAGACGGTGACCTGTCATATCGACCTGATTTTGCAAGGATTATCGCAAAGGAGTTTGTAG", - "dna_sequence_length": 672, - "functions": [ - "DUF1956 domain-containing tetR family putative transcriptional regulator" - ], - "id": "CDS_778", - "location": [ - [ - "NC_000913", - 830643, - "-", - 672 - ] - ], - "md5": "cc1645f054bbb7402ed2f4b6f4234fcf", - "parent_gene": "", - "protein_md5": "fbb94e456cf917e10ede5ffbb32bf5dd", - "protein_translation": "MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQNIAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRACRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDANDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGLSQRSL", - "protein_translation_length": 223, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0797" - ], - [ - "gene_synonym", - "EcoGene:EG11235" - ], - [ - "gene_synonym", - "rhlE" - ], - [ - "gene_synonym", - "ASAP:ABE-0002719" - ], - [ - "gene_synonym", - "GeneID:945425" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25888" - ], - [ - "gene_synonym", - "GI:16128765" - ], - [ - "gene_synonym", - "JW0781" - ], - [ - "gene_synonym", - "ECK0786" - ], - [ - "gene_synonym", - "NP_415318.1" - ] - ], - "dna_sequence": "ATGTCTTTCGATTCTTTGGGTTTAAGCCCTGATATCCTGCGCGCCGTTGCCGAGCAGGGTTACCGTGAACCCACCCCTATTCAGCAGCAGGCGATCCCTGCGGTGCTGGAAGGCCGCGACCTGATGGCTAGCGCCCAGACCGGCACCGGCAAAACAGCGGGCTTTACGCTGCCGCTGTTGCAACACCTGATCACTCGCCAGCCGCACGCCAAAGGGCGTCGTCCGGTACGTGCGCTCATTCTTACCCCGACCCGTGAACTGGCGGCGCAGATTGGCGAAAACGTCCGTGATTACAGCAAATACCTGAACATTCGTTCGCTGGTGGTGTTTGGTGGTGTGAGTATTAACCCGCAGATGATGAAACTGCGTGGCGGCGTTGATGTGCTGGTGGCAACCCCGGGACGTTTGCTGGACCTGGAACATCAGAATGCAGTGAAGCTGGATCAGGTTGAAATCCTCGTCCTCGATGAAGCTGACCGCATGCTCGACATGGGCTTTATCCACGATATCCGTCGCGTGTTAACAAAACTACCTGCGAAGCGCCAGAACCTGTTATTCTCCGCGACCTTCTCTGACGATATTAAAGCCCTGGCGGAAAAACTGTTGCACAACCCGCTGGAAATCGAAGTGGCACGCCGCAATACCGCGTCTGATCAGGTGACCCAGCACGTTCACTTTGTCGATAAGAAACGCAAACGCGAATTGCTGTCGCACATGATTGGGAAAGGGAACTGGCAGCAGGTGCTGGTGTTTACCCGTACCAAACACGGCGCTAACCATCTGGCTGAACAGCTCAATAAAGATGGCATCCGTAGTGCGGCGATCCACGGCAATAAATCGCAAGGTGCGCGTACTCGTGCGCTGGCTGATTTTAAATCGGGCGATATTCGTGTACTGGTGGCAACTGACATCGCTGCGCGCGGCCTGGATATTGAAGAGCTGCCGCACGTCGTCAACTATGAACTGCCAAACGTACCTGAAGATTATGTCCACCGTATCGGGCGTACCGGTCGTGCGGCTGCTACCGGTGAAGCGTTGTCGCTGGTGTGTGTTGATGAACACAAACTGCTGCGTGATATCGAAAAACTGCTGAAAAAAGAGATCCCGCGCATTGCGATTCCGGGCTATGAGCCGGACCCGTCAATCAAAGCCGAACCGATCCAGAACGGTCGCCAGCAACGTGGCGGCGGCGGTCGTGGGCAAGGTGGTGGTCGCGGTCAACAGCAACCACGCCGTGGGGAAGGTGGCGCAAAATCTGCAAGCGCGAAACCTGCAGAAAAACCGTCTCGCCGCCTCGGCGATGCCAAACCGGCAGGCGAACAACAACGTCGCCGCCGTCCGCGTAAACCTGCCGCTGCGCAGTAA", 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- [ - "gene_synonym", - "NP_415319.1" - ], - [ - "gene_synonym", - "b0798" - ], - [ - "gene_synonym", - "GI:16128766" - ], - [ - "gene_synonym", - "ybiA" - ], - [ - "gene_synonym", - "ECK0787" - ], - [ - "gene_synonym", - "JW0783" - ], - [ - "gene_synonym", - "ASAP:ABE-0002722" - ] - ], - "dna_sequence": "ATGCCCGTTCGAGCACAAAGGATCCAACACGTCATGCAAGACACCATCATAAATTTCTACAGCACCAGCGATGACTACGGTGATTTTTCTAACTTTGCCGCCTGGCCCATCAAGGTTGACGGGAAAACCTGGCCTACCTCAGAACACTATTTTCAGGCACAAAAATTCCTTGATGAAAAATACCGCGAAGAGATCCGTCGGGTTTCTTCCCCTATGGTCGCCGCACGCATGGGGCGCGATCGTTCTAAGCCTCTGCGTAAAAACTGGGAGTCGGTCAAAGAACAGGTGATGCGAAAAGCACTTCGCGCTAAATTCGAACAGCATGCAGAACTGCGTGCGCTCTTGCTGGCAACCGCGCCCGCAAAACTGGTTGAGCATACGGAAAACGATGCTTACTGGGGAGACGGTGGTCATGGTAAGGGCAAGAATCGACTGGGCTACCTTTTAATGGAGTTGCGCGAACAATTGGCTATAGAGAAGTAA", - "dna_sequence_length": 483, - "functions": [ - "DUF1768 family protein" - ], - "id": "CDS_780", - "location": [ - [ - "NC_000913", - 832950, - "-", - 483 - ] - ], - "md5": "ac9420dc579bf39d624f4b07c273e6cc", - "parent_gene": "", - "protein_md5": "6d77f6ea6d1b0442df5f049eec76867b", - "protein_translation": "MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGHGKGKNRLGYLLMELREQLAIEK", - "protein_translation_length": 160, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "dinG" - ], - [ - "gene_synonym", - "EcoGene:EG11357" - ], - [ - "gene_synonym", - "rarB" - ], - [ - "gene_synonym", - "NP_415320.1" - ], - [ - "gene_synonym", - "GeneID:945431" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27296" - ], - [ - "gene_synonym", - "b0799" - ], - [ - "gene_synonym", - "GI:16128767" - ], - [ - "gene_synonym", - "ECK0788" - ], - [ - "gene_synonym", - "JW0784" - ], - [ - "gene_synonym", - "ASAP:ABE-0002732" - ] - ], - "dna_sequence": "ATGGCATTAACCGCCGCGCTTAAAGCGCAAATTGCCGCCTGGTATAAGGCGCTTCAGGAACAGATCCCCGACTTTATTCCCCGTGCGCCGCAGCGGCAGATGATTGCGGACGTCGCCAAAACGCTGGCCGGAGAAGAAGGGCGACATCTGGCGATTGAAGCCCCCACCGGCGTTGGGAAAACGCTCTCTTATTTGATTCCCGGCATCGCCATTGCCCGCGAAGAGCAAAAAACGCTGGTGGTGAGTACCGCCAACGTGGCATTGCAGGATCAGATTTACAGCAAAGATTTACCGCTGCTGAAAAAGATCATTCCCGATCTTAAATTCACTGCCGCTTTTGGGCGTGGGCGCTACGTTTGTCCGCGTAATCTGACGGCGCTCGCCAGTACTGAACCCACGCAACAGGATCTGCTGGCGTTTCTTGACGACGAACTGACGCCGAACAATCAGGAAGAGCAAAAACGTTGTGCGAAGCTGAAGGGCGATCTCGATACTTATAAATGGGATGGTCTGCGCGATCATACTGATATCGCTATAGATGACGATCTCTGGCGTCGTTTAAGTACCGACAAAGCCAGCTGCCTCAACCGCAATTGTTACTACTATCGTGAATGCCCGTTTTTTGTCGCTCGTCGGGAGATTCAGGAAGCGGAAGTGGTGGTGGCAAACCATGCGCTGGTGATGGCGGCGATGGAAAGCGAAGCGGTATTGCCTGACCCGAAAAATTTACTGCTGGTGCTGGACGAAGGCCATCACCTGCCGGATGTGGCGCGGGATGCGCTTGAGATGAGCGCCGAAATCACCGCGCCGTGGTATCGGCTACAGCTGGACTTGTTCACGAAACTGGTCGCTACCTGCATGGAGCAGTTTCGCCCGAAGACCATCCCACCGCTGGCGATCCCTGAACGTTTGAATGCGCATTGTGAAGAGTTGTATGAGCTTATCGCCTCGTTAAACAACATTCTCAATCTCTACATGCCTGCCGGGCAGGAGGCAGAGCACCGTTTTGCGATGGGCGAACTGCCAGATGAAGTGCTGGAGATCTGCCAGCGGCTGGCAAAACTCACCGAGATGCTGCGTGGCCTGGCGGAGTTATTTCTTAACGATTTAAGTGAGAAAACCGGCAGCCATGACATTGTACGTCTGCATCGGTTGATTTTGCAGATGAACCGCGCGTTGGGGATGTTCGAGGCGCAAAGCAAACTCTGGCGGCTGGCTTCGCTGGCGCAATCTTCCGGTGCACCGGTGACCAAATGGGCGACGCGGGAAGAGCGCGAAGGGCAGCTACACCTCTGGTTTCACTGCGTGGGAATACGTGTCAGCGATCAGCTGGAAAGGCTGCTGTGGCGCAGTATTCCGCACATTATTGTCACCTCCGCAACCTTGCGTTCGCTGAACAGTTTTTCGCGTTTGCAGGAGATGAGTGGTCTGAAAGAGAAAGCGGGCGACCGTTTTGTGGCGCTGGATTCCCCCTTTAACCACTGCGAACAGGGCAAAATTGTTATTCCCCGGATGCGCGTTGAGCCTTCCATCGACAACGAAGAGCAGCATATTGCCGAAATGGCGGCCTTTTTCCGTAAGCAGGTGGAGAGCAAAAAACATCTCGGTATGTTGGTACTGTTTGCCAGCGGACGGGCGATGCAGCGCTTTCTCGACTATGTGACGGATTTACGTCTGATGTTGCTGGTTCAGGGCGATCAGCCGCGTTACCGTTTAGTTGAACTGCACCGCAAACGCGTCGCCAACGGTGAGCGCAGCGTGCTGGTGGGCTTACAGTCATTTGCCGAAGGGCTTGATTTGAAAGGTGATCTGCTCAGCCAGGTGCATATCCACAAAATCGCTTTTCCGCCCATCGACAGCCCGGTGGTGATCACCGAAGGGGAATGGCTGAAAAGCCTCAACCGCTATCCGTTTGAGGTGCAAAGCCTGCCGAGCGCCTCGTTTAACCTGATTCAGCAGGTTGGGCGACTGATTCGAAGCCACGGTTGCTGGGGCGAAGTGGTTATCTACGACAAACGCTTGCTGACCAAAAATTATGGCAAGCGACTACTGGATGCATTACCGGTATTTCCGATAGAGCAACCGGAAGTCCCTGAAGGTATAGTTAAAAAGAAAGAAAAAACGAAATCCCCACGCCGTCGGCGGCGTTAA", - "dna_sequence_length": 2151, - "functions": [ - "ATP-dependent DNA helicase" - ], - "id": "CDS_781", - "location": [ - [ - "NC_000913", - 833070, - "+", - 2151 - ] - ], - "md5": "bdf405e81e3e730ce2e56ceb5b3b615d", - "parent_gene": "", - "protein_md5": "f1961c5a6f2852ef21ce220148bd0252", - "protein_translation": "MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQLDLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVEPSIDNEEQHIAEMAAFFRKQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKRLLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR", - "protein_translation_length": 716, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415321.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30177" - ], - [ - "gene_synonym", - "EcoGene:EG11580" - ], - [ - "gene_synonym", - "b0800" - ], - [ - "gene_synonym", - "ybiB" - ], - [ - "gene_synonym", - "GeneID:945424" - ], - [ - "gene_synonym", - "ECK0789" - ], - [ - "gene_synonym", - "ASAP:ABE-0002734" - ], - [ - "gene_synonym", - "GI:16128768" - ], - [ - "gene_synonym", - "JW0785" - ] - ], - "dna_sequence": "ATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCGCGATTTAGACCGGGATACTGCGCGCGGTCTGTATGCTCATATGCTCAATGGTGAAGTCCCTGACCTTGAGTTGGGCGGCGTATTGATTGCGCTGCGTATCAAAGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGCCAACGTTGCACGGCGGGCAGGCGCAGGCGAAGCTCGACGAACATCAACCGGTGTTTATGCCAGTCGGCGCGTTTTGCCCGCCGCTGGAAAAACAACTGGCGATGCGCTGGCGGATGGGCGTGCGTAACAGTGCACATACCCTGGCGAAACTGGCGACGCCATTTGCCGAAGGTGAGGCGCTGCGTCTTTCCAGCGTTTCGCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAA", - "dna_sequence_length": 963, - "functions": [ - "putative family 3 glycosyltransferase" - ], - "id": "CDS_782", - "location": [ - [ - "NC_000913", - 835248, - "+", - 963 - ] - ], - "md5": "89fc41c6973b2cbf3edd1e277b297229", - "parent_gene": "", - "protein_md5": "bf533f2aef1fdd0536d0754109696a77", - "protein_translation": "MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGGVLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDIGGRALLMHGTEGEVYANPQRCPQINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQWIERCLAGSEPIPESLKIQMACCLVATGEAATISDGLARVNQAF", - "protein_translation_length": 320, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11581" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30178" - ], - [ - "gene_synonym", - "b0801" - ], - [ - "gene_synonym", - "ybiC" - ], - [ - "gene_synonym", - "NP_415322.1" - ], - [ - "gene_synonym", - "GeneID:945412" - ], - [ - "gene_synonym", - "ASAP:ABE-0002738" - ], - [ - "gene_synonym", - "ECK0790" - ], - [ - "gene_synonym", - "GI:16128769" - ], - [ - "gene_synonym", - "JW0786" - ] - ], - "dna_sequence": "ATGGAAAGTGGTCATCGCTTTGATGCTCAGACGCTGCACAGTTTTATTCAGGCTGTATTTCGTCAGATGGGTAGCGAGGAACAAGAAGCGAAATTAGTTGCCGATCATTTAATCGCGGCAAACCTGGCAGGGCATGATTCACATGGTATTGGCATGATCCCAAGCTATGTACGCTCCTGGAGTCAGGGGCACCTGCAAATTAACCATCATGCCAAAACCGTTAAAGAGGCGGGGGCGGCGGTCACGCTCGATGGCGATCGCGCATTTGGTCAGGTCGCGGCACATGAAGCGATGGCGCTGGGGATTGAGAAAGCGCATCAGCACGGTATTGCCGCCGTGGCGCTACATAACTCGCATCATATCGGCCGTATCGGTTACTGGGCGGAGCAGTGTGCAGCGGCGGGGTTTGTCTCTATCCACTTTGTTAGCGTGGTCGGTATTCCAATGGTCGCGCCGTTCCACGGTCGCGACAGCCGCTTTGGCACCAATCCGTTCTGTGTGGTTTTCCCTCGTAAAGATAATTTCCCGCTGTTGCTTGATTACGCCACCAGCGCCATTGCATTTGGCAAAACCCGCGTCGCCTGGCATAAAGGCGTCCCCGTGCCGCCAGGTTGCCTGATTGACGTTAACGGCGTGCCGACGACCAATCCGGCGGTAATGCAGGAGTCGCCGTTGGGTTCGCTGTTGACCTTTGCCGAACATAAAGGCTACGCCCTTGCAGCGATGTGTGAAATTCTTGGCGGGGCGCTTTCCGGCGGTAAAACGACGCATCAGGAAACGTTACAAACCAGTCCCGATGCCATTCTTAACTGCATGACCACTATCATCATCAACCCGGAACTCTTCGGCGCGCCGGATTGTAACGCGCAGACCGAAGCCTTTGCCGAGTGGGTGAAAGCCTCGCCGCATGATGATGATAAGCCGATTTTGCTACCGGGCGAGTGGGAAGTGAACACGCGTCGCGAACGGCAGAAGCAGGGGATTCCACTGGATGCGGGAAGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCTAA", 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"gene_synonym", - "GeneID:945433" - ], - [ - "gene_synonym", - "GI:16128770" - ], - [ - "gene_synonym", - "ybiJ" - ], - [ - "gene_synonym", - "ECK0791" - ], - [ - "gene_synonym", - "JW0787" - ] - ], - "dna_sequence": "ATGAAAACTATCAATACTGTTGTTGCTGCTATGGCTCTTTCAACTCTGTCATTTGGCGTGTTCGCGGCGGAACCGGTAACGGCATCCCAGGCACAGAACATGAATAAAATCGGCGTGGTTTCTGCCGATGGCGCATCCACCCTCGATGCCCTGGAAGCGAAACTGGCTGAGAAAGCCGCGGCAGCCGGTGCCAGTGGATACAGCATCACTTCCGCCACCAACAACAATAAATTAAGCGGTACTGCGGTAATTTATAAGTAA", - "dna_sequence_length": 261, - "functions": [ - "DUF1471 family putative periplasmic protein" - ], - "id": "CDS_784", - "location": [ - [ - "NC_000913", - 837925, - "-", - 261 - ] - ], - "md5": "7aeee19785c726c12e5f96a86083975a", - "parent_gene": "", - "protein_md5": "abff3b4bc0880312dc5caa4a683d877d", - "protein_translation": "MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADGASTLDALEAKLAEKAAAAGASGYSITSATNNNKLSGTAVIYK", - "protein_translation_length": 86, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P41039" - ], - [ - "gene_synonym", - "b0803" - ], - [ - "gene_synonym", - "EcoGene:EG12421" - ], - [ - "gene_synonym", - "JW0788" - ], - [ - "gene_synonym", - "GeneID:945434" - ], - [ - "gene_synonym", - "GI:16128771" - ], - [ - "gene_synonym", - "NP_415324.1" - ], - [ - "gene_synonym", - "ybiI" - ], - [ - "gene_synonym", - "ASAP:ABE-0002744" - ], - [ - "gene_synonym", - "ECK0792" - ] - ], - "dna_sequence": "ATGGCATCCGGTTGGGCTAACGATGACGCCGTCAACGAACAGATCAACAGTACAATTGAAGATGCGATTGCCCGCGCTCGGGGTGAAATTCCGCGCGGCGAAAGCCTGGATGAATGTGAAGAGTGCGGTGCCCCCATCCCGCAGGCCCGTCGGGAAGCCATTCCTGGCGTGCGCTTATGTATTCATTGTCAGCAGGAGAAAGATTTACAAAAACCAGCTTATACAGGATATAATCGCAGAGGTTCGAAAGACAGCCAGTTACGTTAA", - "dna_sequence_length": 267, - "functions": [ - "DksA-type zinc finger protein" - ], - "id": "CDS_785", - "location": [ - [ - "NC_000913", - 838456, - "-", - 267 - ] - ], - "md5": "b539b35b3145eec5f376fbd22b8ac3c1", - "parent_gene": "", - "protein_md5": "2d104461a69ff3e06333a7425b9ff25c", - "protein_translation": "MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR", - "protein_translation_length": 88, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415325.4" - ], - [ - "gene_synonym", - "GeneID:947502" - ], - [ - "gene_synonym", - "ybiX" - ], - [ - "gene_synonym", - "b0804" - ], - [ - "gene_synonym", - "EcoGene:EG13316" - ], - [ - "gene_synonym", - "JW5105" - ], - [ - "gene_synonym", - "GI:90111170" - ], - [ - "gene_synonym", - "ASAP:ABE-0002746" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75779" - ], - [ - "gene_synonym", - "ECK0793" - ] - ], - "dna_sequence": "ATGATGTACCACATTCCCGGCGTGTTATCGCCACAGGACGTCGCTCGTTTTCGCGAACAACTGGAACAAGCCGAATGGGTGGATGGACGCGTCACCACCGGCGCACAAGGTGCGCAAGTTAAGAACAATCAACAGGTCGACACCCGCAGCACGTTATACGCCGCCCTGCAAAATGAGGTGCTGAACGCGGTTAACCAACATGCTTTATTCTTTGCCGCGGCCTTGCCGCGTACCCTTTCCACGCCGCTGTTTAATCGCTATCAGAACAATGAAACCTATGGTTTCCATGTGGATGGCGCAGTACGCAGCCATCCACAAAACGGCTGGATGCGTACTGACCTTTCTGCCACGCTGTTTTTAAGCGATCCACAAAGCTACGACGGCGGCGAACTGGTCGTTAATGACACCTTCGGACAACATCGGGTAAAACTCCCGGCAGGCGATCTCGTGTTGTATCCCTCCAGCAGCCTGCATTGCGTGACACCCGTAACCCGCGGCGTACGAGTGGCATCATTTATGTGGATCCAGTCGATGATCCGCGATGATAAAAAGCGCGCCATGCTGTTTGAACTGGACAACAATATTCAGTCGCTGAAAAGCCGCTACGGCGAAAGTGAAGAGATCCTGTCGCTGCTTAATCTTTATCATAATCTGCTGCGGGAATGGTCGGAGATCTGA", - "dna_sequence_length": 678, - "functions": [ - "Fe(II)-dependent oxygenase superfamily protein" - ], - "id": "CDS_786", - "location": [ - [ - "NC_000913", - 839207, - "-", - 678 - ] - ], - "md5": "4ae5ba01e9e9790a2a0d9eb0650473dc", - "parent_gene": "", - "protein_md5": "f5cb5c424de48462170a320fa4d4d2f4", - "protein_translation": "MMYHIPGVLSPQDVARFREQLEQAEWVDGRVTTGAQGAQVKNNQQVDTRSTLYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQNNETYGFHVDGAVRSHPQNGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGDLVLYPSSSLHCVTPVTRGVRVASFMWIQSMIRDDKKRAMLFELDNNIQSLKSRYGESEEILSLLNLYHNLLREWSEI", - "protein_translation_length": 225, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0790" - ], - [ - "gene_synonym", - "NP_415326.1" - ], - [ - "gene_synonym", - "b0805" - ], - [ - "gene_synonym", - "fiu" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75780" - ], - [ - "gene_synonym", - "ASAP:ABE-0002749" - ], - [ - "gene_synonym", - "GI:16128773" - ], - [ - "gene_synonym", - "EcoGene:EG13317" - ], - [ - "gene_synonym", - "ECK0794" - ], - [ - "gene_synonym", - "GeneID:946246" - ], - [ - "gene_synonym", - "ybiL" - ] - ], - "dna_sequence": "ATGGAAAACAATCGCAATTTCCCTGCCAGACAATTTCATTCGCTCACGTTCTTTGCCGGTCTTTGTATTGGCATCACGCCTGTGGCTCAGGCACTCGCCGCCGAAGGGCAAACTAACGCGGATGACACGCTGGTTGTCGAAGCATCAACGCCTTCGCTTTATGCGCCACAACAATCTGCCGATCCGAAATTCTCGCGTCCGGTAGCGGATACTACCCGCACGATGACGGTAATTTCTGAACAAGTGATTAAAGATCAGGGCGCAACCAACCTTACCGACGCGCTCAAAAACGTCCCCGGCGTGGGTGCGTTTTTTGCGGGTGAGAACGGTAACTCCACCACTGGCGACGCCATTTATATGCGTGGTGCCGATACCTCTAACAGTATTTATATTGATGGCATTCGCGATATCGGCAGCGTCTCGCGCGACACCTTCAATACCGAGCAGGTCGAAGTGATTAAAGGGCCGTCCGGCACCGACTACGGGCGCAGCGCACCGACAGGCTCGATCAATATGATCAGCAAGCAGCCGCGCAATGATTCCGGCATTGACGCCTCCGCCAGTATTGGCAGCGCCTGGTTCCGCCGCGGCACGCTGGACGTCAATCAGGTCATTGGTGATACCACCGCGGTGCGCCTGAATGTAATGGGCGAAAAAACGCACGATGCCGGACGCGACAAAGTCAAAAATGAGCGTTACGGCGTCGCCCCTTCTGTCGCTTTTGGCCTTGGTACAGCGAATCGTTTGTATCTTAATTATCTGCATGTCACCCAGCACAACACGCCAGACGGCGGCATTCCGACCATCGGTTTGCCGGGCTATTCTGCCCCATCTGCGGGAACGGCGGCCCTGAATCATTCCGGAAAAGTTGATACTCATAACTTTTACGGCACGGATTCCGATTACGACGATTCGACCACCGACACCGCCACCATGCGTTTTGAGCACGACATCAACGATAACACCACCATTCGCAATACTACCCGTTGGTCGCGCGTAAAGCAGGATTACCTGATGACGGCGATTATGGGCGGGGCGTCGAATATTACTCAGCCCACCAGCGATGTGAATAGCTGGACCTGGTCACGCACGGCGAATACCAAAGATGTGAGTAATAAAATTCTCACCAACCAGACCAACCTGACCTCGACGTTCTATACCGGTTCTATCGGTCATGATGTCAGTACCGGCGTGGAATTTACCCGTGAAACGCAGACTAACTACGGCGTTAATCCGGTGACGTTACCCGCGGTAAATATTTATCATCCTGACAGCAGCATTCATCCCGGCGGCCTGACGCGCAACGGCGCAAACGCCAATGGTCAGACGGATACCTTCGCAATTTACGCCTTTGATACGCTGCAAATCACCCGTGATTTTGAGCTGAACGGCGGGATCCGTCTGGATAATTATCATACTGAATATGACAGTGCCACCGCCTGCGGCGGCAGCGGACGCGGTGCCATCACCTGCCCAACTGGTGTGGCAAAAGGTTCTCCGGTCACCACCGTCGACACCGCCAAGTCGGGCAATCTGATGAACTGGAAAGCCGGGGCGCTGTATCACCTGACGGAAAACGGCAATGTCTATATTAACTATGCCGTTTCCCAGCAGCCTCCGGGCGGCAACAACTTCGCCCTTGCGCAGTCTGGCAGCGGTAACAGTGCCAACCGCACCGATTTTAAACCGCAAAAAGCCAACACCAGCGAGATTGGCACCAAATGGCAGGTTCTGGATAAACGTCTGTTGCTCACCGCCGCGCTGTTCCGCACTGATATCGAAAATGAAGTTGAGCAAAATGATGACGGAACTTACTCGCAATACGGTAAGAAACGCGTCGAAGGCTATGAGATATCCGTGGCCGGGAATATCACTCCCGCGTGGCAGGTGATTGGCGGCTATACCCAGCAAAAAGCAACCATCAAAAACGGCAAAGATGTTGCCCAGGATGGTTCCTCATCGCTGCCGTATACCCCGGAGCACGCCTTCACCTTATGGAGCCAATATCAGGCAACCGACGATATCTCTGTTGGCGCGGGCGCACGCTATATCGGCAGTATGCATAAAGGTTCAGACGGCGCGGTGGGAACGCCAGCGTTTACCGAAGGTTACTGGGTCGCCGATGCCAAACTGGGGTATCGAGTTAATCGCAATCTCGACTTCCAGCTAAACGTTTACAACCTGTTTGATACCGATTACGTCGCCTCAATCAACAAGAGCGGCTACCGTTATCACCCGGGCGAGCCAAGAACCTTCTTGCTCACAGCCAATATGCATTTCTGA", 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"MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVGAFFAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDINDNTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVSTGVEFTRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSATACGGSGRGAITCPTGVAKGSPVTTVDTAKSGNLMNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQSGSGNSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYEISVAGNITPAWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLDFQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF", - "protein_translation_length": 760, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947523" - ], - [ - "gene_synonym", - "EcoGene:EG13318" - ], - [ - "gene_synonym", - "b0806" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAX6" - ], - [ - "gene_synonym", - "mcbA" - ], - [ - "gene_synonym", - "GI:90111171" - ], - [ - "gene_synonym", - "JW5106" - ], - [ - "gene_synonym", - "ASAP:ABE-0002753" - ], - [ - "gene_synonym", - "NP_415327.2" - ], - [ - "gene_synonym", - "ECK0795" - ], - [ - "gene_synonym", - "ybiM" - ] - ], - "dna_sequence": "ATGAAAAAGTGCCTCACACTACTGATTGCCACCGTCCTGAGCGGAATCTCTCTCACGGCTTATGCCGCGCAACCGATGAGTAACCTGGACAGCGGTCAGCTACGGCCCGCCGGTACCGTTTCGGCAACTGGCGCATCAAACCTAAGCGATCTGGAGGATAAACTGGCAGAAAAAGCGCGCGAACAAGGCGCGAAAGGTTATGTCATTAATTCCGCAGGCGGAAATGACCAGATGTTCGGTACTGCAACCATCTACAAATAA", - "dna_sequence_length": 261, - "functions": [ - "colanic acid mucoidy stimulation protein" - ], - "id": "CDS_788", - "location": [ - [ - "NC_000913", - 842056, - "-", - 261 - ] - ], - "md5": "6070e1889e9e8b41b7ce7e8575d28685", - "parent_gene": "", - "protein_md5": "4e25ab31fd829d2217e93cea6d4d306d", - "protein_translation": "MKKCLTLLIATVLSGISLTAYAAQPMSNLDSGQLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSAGGNDQMFGTATIYK", - "protein_translation_length": 86, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13319" - ], - [ - "gene_synonym", - "GeneID:944938" - ], - [ - "gene_synonym", - "b0807" - ], - [ - "gene_synonym", - "rlmF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75782" - ], - [ - "gene_synonym", - "GI:162135897" - ], - [ - "gene_synonym", - "ASAP:ABE-0002757" - ], - [ - "gene_synonym", - "JW5107" - ], - [ - "gene_synonym", - "ECK0796" - ], - [ - "gene_synonym", - "NP_415328.4" - ], - [ - "gene_synonym", - "ybiN" - ] - ], - "dna_sequence": "ATGTCCGCCCAGAAACCGGGGTTGCATCCGCGCAACCGTCATCACAGCCGCTACGATCTCGCCACGCTTTGTCAGGTCAATCCTGAACTCAGGCAATTCCTCACGCTTACACCCGCCGGGGAGCAAAGCGTAGACTTTGCCAATCCGCTGGCGGTGAAGGCGCTCAATAAGGCGTTGCTGGCCCATTTTTACGCCGTAGCGAACTGGGATATCCCCGACGGTTTTCTCTGCCCACCAGTACCGGGCCGGGCGGATTATATTCATCACCTTGCCGATTTACTGGCAGAAGCAAGCGGAACAATTCCAGCGAATGCCAGCATTCTGGATATCGGCGTTGGTGCGAACTGTATTTATCCGCTGATTGGCGTACATGAATATGGCTGGCGTTTTACCGGTAGTGAAACCAGCAGCCAGGCGTTAAGCAGTGCGCAGGCGATTATCAGTTCTAATCCGGGGCTTAACCGCGCCATTCGTCTGCGTCGGCAAAAAGAGAGTGGGGCGATTTTTAACGGCATCATCCATAAAAACGAGCAATACGACGCGACCTTGTGTAACCCGCCATTCCACGATTCCGCCGCTGCGGCACGGGCAGGTAGTGAGCGTAAACGCCGTAACCTGGGGCTGAACAAAGACGATGCACTGAACTTTGGCGGCCAGCAACAGGAGTTGTGGTGTGAAGGCGGTGAAGTCACCTTTATCAAAAAGATGATTGAAGAGAGCAAAGGCTTCGCGAAGCAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCCTGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAA", - "dna_sequence_length": 927, - "functions": [ - "23S rRNA m(6)A1618 methyltransferase, SAM-dependent" - ], - "id": "CDS_789", - "location": [ - [ - "NC_000913", - 842332, - "+", - 927 - ] - ], - "md5": "6b3575a03a368a4401a225ffdc444468", - "parent_gene": "", - "protein_md5": "edd6edbdc16d132f8504a447e8bb8bd4", - "protein_translation": "MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRRQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGGQQQELWCEGGEVTFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR", - "protein_translation_length": 308, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0808" - ], - [ - "gene_synonym", - "EcoGene:EG13320" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75783" - ], - [ - "gene_synonym", - "ybiO" - ], - [ - "gene_synonym", - "GI:90111173" - ], - [ - "gene_synonym", - "ASAP:ABE-0002760" - ], - [ - "gene_synonym", - "GeneID:945935" - ], - [ - "gene_synonym", - "ECK0797" - ], - [ - "gene_synonym", - "JW5108" - ], - [ - "gene_synonym", - "NP_415329.4" - ] - ], - "dna_sequence": "ATGCGGTGGATCCTGTTCATCCTCTTCTGCCTGCTGGGCGCACCTGCCCACGCGGTATCCATACCCGGCGTTACAACCACAACGACAACGGACTCAACGACTGAACCGGCCCCGGAACCGGATATCGAACAAAAAAAAGCGGCCTATGGCGCACTGGCGGATGTGCTGGATAATGACACCTCGCGTAAAGAGTTGATCGACCAGTTGCGCACCGTTGCCGCTACGCCCCCTGCTGAACCGGTACCAAAAATAGTGCCGCCGACGCTGGTCGAAGAGCAAACCGTGCTGCAAAAGGTCACCGAAGTCAGCCGCCATTATGGTGAAGCCCTTTCCGCCCGCTTCGGGCAACTTTATCGCAATATCACCGGCTCCCCGCATAAGCCGTTTAATCCACAAACCTTCAGCAATGCGCTGACCCATTTTTCAATGTTAGCGGTATTAGTGTTTGGTTTTTACTGGCTGATTCGCCTGTGCGCACTGCCGCTGTATCGCAAAATGGGTCAGTGGGCGCGGCAAAAAAATCGTGAGCGCAGCAACTGGTTGCAGCTTCCGGCGATGATTATCGGGGCGTTTATTATCGACCTGCTGTTACTGGCCCTGACATTATTTGTCGGCCAGGTATTAAGCGACAACCTGAATGCAGGCAGTCGCACCATCGCTTTCCAACAAAGTTTGTTTCTCAACGCCTTTGCCCTCATTGAATTTTTCAAAGCCGTACTACGCCTGATTTTTTGCCCAAACGTGGCGGAGCTGCGCCCGTTCACGATTCAGGACGAGAGCGCCCGTTACTGGAGTCGTCGCCTGAGCTGGTTAAGCAGTTTGATAGGTTATGGCCTGATTGTGGCCGTGCCGATTATCTCTAATCAGGTGAATGTACAGATAGGTGCGCTGGCGAACGTCATCATTATGCTGTGCATGACCGTCTGGGCGTTGTACCTGATCTTTCGTAATAAAAAAGAGATTACCCAGCATTTGCTCAACTTCGCGGAGCATTCGCTGGCCTTTTTCAGCCTGTTTATCCGCGCCTTTGCGCTGGTGTGGCACTGGCTGGCAAGCGCCTATTTTATCGTGCTGTTTTTCTTTTCGTTGTTCGATCCGGGCAACAGCCTGAAATTTATGATGGGTGCAACGGTGCGCAGCCTGGCGATTATTGGTATCGCAGCGTTTGTTTCCGGTATGTTTTCCCGCTGGCTGGCGAAAACCATCACTCTCTCGCCACATACTCAGCGTAACTATCCGGAGCTGCAAAAACGGTTGAATGGCTGGCTGTCGGCGGCGCTGAAAACGGCGCGTATTCTGACAGTCTGCGTGGCGGTAATGTTGCTGTTGAGCGCATGGGGATTGTTCGATTTCTGGAACTGGCTGCAAAACGGCGCGGGGCAGAAAACCGTAGATATCCTGATCCGTATCGCACTCATTCTTTTCTTCTCGGCGGTTGGCTGGACGGTGCTCGCCAGTTTGATCGAAAACCGGCTGGCTTCGGATATTCATGGCCGCCCGCTACCCAGCGCCCGCACGCGTACCCTGCTTACGCTGTTTCGTAACGCGCTGGCGGTGATTATCAGTACCATCACCATCATGATTGTGTTGTCGGAAATCGGCGTCAATATCGCGCCATTGCTGGCAGGTGCCGGGGCATTAGGTCTGGCTATCTCGTTTGGTTCGCAAACGCTGGTGAAAGATATTATCACCGGGGTATTTATTCAGTTTGAAAACGGCATGAACACTGGAGATTTGGTGACTATCGGGCCGTTGACCGGCACAGTGGAACGGATGTCGATTCGCTCCGTGGGCGTACGACAGGATACCGGGGCGTATCACATCATTCCGTGGTCTTCGATAACCACCTTTGCTAACTTTGTCCGCGGCATTGGTTCGGTGGTGGCAAATTATGATGTTGATCGCCATGAAGATGCTGATAAAGCCAATCAGGCACTGAAAGATGCGGTAGCGGAATTAATGGAAAACGAAGAAATTCGCGGGCTGATTATTGGTGAACCGAATTTTGCCGGGATTGTCGGCTTAAGCAATACCGCGTTTACACTGCGTGTTTCGTTCACCACGCTGCCACTCAAACAGTGGACGGTACGCTTTGCCCTCGACAGCCAGGTGAAAAAACATTTCGACCTGGCGGGCGTTCGCGCGCCAGTGCAGACTTATCAGGTGCTGCCTGCTCCGGGCGCGACCCCGGCTGAACCGTTACCGCCGGGGGAACCAACGCTTTAA", 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"MRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQKKAAYGALADVLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEVSRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCALPLYRKMGQWARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRTIAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIQDESARYWSRRLSWLSSLIGYGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLAFFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSGMFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFDFWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLASDIHGRPLPSARTRTLLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGVFIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDADKANQALKDAVAELMENEEIRGLIIGEPNFAGIVGLSNTAFTLRVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQTYQVLPAPGATPAEPLPPGEPTL", - "protein_translation_length": 741, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0794" - ], - [ - "gene_synonym", - "b0809" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10346" - ], - [ - "gene_synonym", - "GI:16128777" - ], - [ - "gene_synonym", - "EcoGene:EG10389" - ], - [ - "gene_synonym", - "GeneID:945435" - ], - [ - "gene_synonym", - "ECK0798" - ], - [ - "gene_synonym", - "ASAP:ABE-0002764" - ], - [ - "gene_synonym", - "glnQ" - ], - [ - "gene_synonym", - "NP_415330.1" - ] - ], - "dna_sequence": "GTGATTGAATTTAAAAACGTCTCCAAGCACTTTGGCCCAACCCAGGTGCTGCACAATATCGATTTGAACATTGCCCAGGGCGAAGTCGTGGTGATTATCGGGCCGTCCGGTTCCGGTAAATCGACCCTGCTGCGCTGCATCAACAAACTGGAAGAAATCACCTCCGGCGATCTGATTGTCGATGGCCTGAAGGTTAACGATCCGAAAGTTGACGAGCGCCTGATTCGCCAGGAAGCAGGTATGGTGTTCCAGCAGTTTTACCTCTTCCCGCATCTGACAGCGCTGGAAAACGTCATGTTTGGCCCGCTACGCGTGCGTGGCGCGAACAAAGAAGAGGCGGAAAAACTGGCACGTGAGCTGCTGGCGAAAGTCGGTCTGGCAGAACGTGCACATCACTACCCTTCCGAACTTTCTGGTGGTCAACAGCAGCGTGTGGCGATTGCCCGCGCGCTGGCGGTGAAGCCGAAAATGATGCTGTTTGATGAACCGACTTCCGCTCTTGACCCGGAACTGCGCCATGAAGTGCTGAAGGTTATGCAGGATCTGGCTGAAGAAGGGATGACGATGGTGATCGTGACCCACGAAATCGGTTTTGCCGAGAAAGTAGCTTCGCGGCTGATCTTTATCGACAAAGGCCGGATTGCGGAAGATGGCAATCCGCAGGTGTTGATCAAGAACCCGCCGAGCCAGCGCTTGCAGGAATTTTTGCAGCACGTCTCTTAA", - "dna_sequence_length": 723, - "functions": [ - "glutamine transporter subunit" - ], - "id": "CDS_791", - "location": [ - [ - "NC_000913", - 846463, - "-", - 723 - ] - ], - "md5": "20d42bd0d4b0be6a14b623f84de7e39c", - "parent_gene": "", - "protein_md5": "7c55c3d50507cda11af3cf0be83bf025", - "protein_translation": "MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGANKEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGNPQVLIKNPPSQRLQEFLQHVS", - "protein_translation_length": 240, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0795" - ], - [ - "gene_synonym", - "ASAP:ABE-0002766" - ], - [ - "gene_synonym", - "b0810" - ], - [ - "gene_synonym", - "NP_415331.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEQ6" - ], - [ - "gene_synonym", - "EcoGene:EG10388" - ], - [ - "gene_synonym", - "ECK0799" - ], - [ - "gene_synonym", - "glnP" - ], - [ - "gene_synonym", - "GeneID:945621" - ], - [ - "gene_synonym", - "GI:16128778" - ] - ], - "dna_sequence": "ATGCAGTTTGACTGGAGTGCCATCTGGCCTGCCATTCCGCTTCTGATTGAAGGTGCCAAAATGACCCTGTGGATTTCGGTCCTCGGTCTGGCAGGCGGTCTGGTAATCGGATTGCTGGCAGGTTTTGCACGCACCTTCGGAGGTTGGATAGCCAACCACGTCGCGCTGGTCTTTATTGAAGTGATCCGCGGCACACCTATCGTCGTCCAGGTGATGTTTATTTATTTCGCCCTGCCGATGGCGTTTAACGACTTACGCATCGACCCATTTACTGCGGCGGTGGTCACCATCATGATCAACTCCGGCGCGTATATTGCGGAAATCACGCGTGGTGCGGTGCTGTCTATCCACAAAGGTTTTCGTGAAGCAGGACTGGCGCTCGGTCTTTCACGTTGGGAAACCATTCGCTACGTCATTTTACCGCTGGCACTGCGTCGTATGCTGCCGCCGCTGGGTAACCAGTGGATCATCAGCATTAAAGACACCTCGCTGTTTATTGTGATCGGCGTGGCGGAACTGACCCGTCAGGGGCAAGAAATTATTGCCGGTAACTTCCGCGCCCTTGAGATCTGGAGCGCCGTGGCGGTGTTCTATCTGATTATTACCCTGGTGCTGAGCTTTATTCTGCGTCGTCTGGAAAGAAGGATGAAAATCCTGTGA", - "dna_sequence_length": 660, - "functions": [ - "glutamine transporter subunit" - ], - "id": "CDS_792", - "location": [ - [ - "NC_000913", - 847119, - "-", - 660 - ] - ], - "md5": "e087eec8bc921a71b23885d826851e7b", - "parent_gene": "", - "protein_md5": "23b8aa955e966f3380b21e304332387f", - "protein_translation": "MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKIL", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0800" - ], - [ - "gene_synonym", - "JW0796" - ], - [ - "gene_synonym", - "glnH" - ], - [ - "gene_synonym", - "b0811" - ], - [ - "gene_synonym", - "GeneID:944872" - ], - [ - "gene_synonym", - "NP_415332.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002771" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEQ3" - ], - [ - "gene_synonym", - "EcoGene:EG10386" - ], - [ - "gene_synonym", - "GI:16128779" - ] - ], - "dna_sequence": "ATGAAGTCTGTATTAAAAGTTTCACTGGCTGCACTGACCCTGGCTTTTGCGGTTTCTTCTCATGCCGCGGATAAAAAATTAGTTGTCGCGACGGATACCGCCTTCGTTCCGTTTGAATTTAAACAGGGCGATAAATATGTGGGCTTTGACGTTGATCTGTGGGCTGCCATCGCTAAAGAGCTGAAGCTGGATTACGAACTGAAGCCGATGGATTTCAGTGGGATCATTCCGGCACTGCAAACCAAAAACGTCGATCTGGCGCTGGCGGGCATTACCATCACCGACGAGCGTAAAAAAGCGATCGATTTCTCTGACGGCTACTACAAAAGCGGCCTGTTAGTGATGGTGAAAGCTAACAATAACGATGTGAAAAGCGTGAAAGATCTCGACGGGAAAGTGGTTGCTGTGAAGAGCGGTACTGGCTCCGTTGATTACGCGAAAGCAAACATCAAAACTAAAGATCTGCGTCAGTTCCCGAACATCGATAACGCCTATATGGAACTGGGCACCAACCGCGCAGACGCCGTTCTGCACGATACGCCAAACATTCTGTACTTCATCAAAACCGCCGGTAACGGTCAGTTCAAAGCGGTAGGTGACTCTCTGGAAGCGCAGCAATACGGTATTGCGTTCCCGAAAGGTAGCGACGAGCTGCGTGACAAAGTCAACGGCGCGTTGAAAACCCTGCGCGAGAACGGAACTTACAACGAAATCTACAAAAAATGGTTCGGTACTGAACCGAAATAA", - "dna_sequence_length": 747, - "functions": [ - "glutamine transporter subunit" - ], - "id": "CDS_793", - "location": [ - [ - "NC_000913", - 848004, - "-", - 747 - ] - ], - "md5": "de8c023754b14101445556ef30883e0b", - "parent_gene": "", - "protein_md5": "91e1fc09c4c0571f784e7272bf3d625a", - "protein_translation": "MKSVLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGDKYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDELRDKVNGALKTLRENGTYNEIYKKWFGTEPK", - "protein_translation_length": 248, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0797" - ], - [ - "gene_synonym", - "ECK0801" - ], - [ - "gene_synonym", - "NP_415333.1" - ], - [ - "gene_synonym", - "dps" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABT2" - ], - [ - "gene_synonym", - "b0812" - ], - [ - "gene_synonym", - "vtm" - ], - [ - "gene_synonym", - "GeneID:945101" - ], - [ - "gene_synonym", - "EcoGene:EG11415" - ], - [ - "gene_synonym", - "pexB" - ], - [ - "gene_synonym", - "ASAP:ABE-0002776" - ], - [ - "gene_synonym", - "GI:16128780" - ] - ], - "dna_sequence": "ATGAGTACCGCTAAATTAGTTAAATCAAAAGCGACCAATCTGCTTTATACCCGCAACGATGTCTCCGACAGCGAGAAAAAAGCAACAGTAGAGTTGCTGAATCGCCAGGTTATCCAGTTTATTGATCTTTCTTTGATTACCAAACAAGCGCACTGGAACATGCGCGGCGCTAACTTCATTGCCGTACATGAAATGCTGGATGGCTTCCGCACCGCACTGATCGATCATCTGGATACCATGGCAGAACGTGCAGTGCAGCTGGGCGGTGTAGCTCTGGGGACCACTCAAGTTATCAACAGCAAAACCCCGCTGAAAAGTTACCCGCTGGACATCCACAACGTTCAGGATCACCTGAAAGAACTGGCTGACCGTTACGCAATCGTCGCTAATGACGTACGCAAAGCGATTGGCGAAGCGAAAGATGACGACACCGCAGATATCCTGACCGCCGCGTCTCGCGACCTGGATAAATTCCTGTGGTTTATCGAGTCTAACATCGAATAA", - "dna_sequence_length": 504, - "functions": [ - "Fe-binding and storage protein", - "stress-inducible DNA-binding protein" - ], - "id": "CDS_794", - "location": [ - [ - "NC_000913", - 848911, - "-", - 504 - ] - ], - "md5": "c79541d2f51893a7135e6a62b3721fca", - "parent_gene": "", - "protein_md5": "36aa46c3c11c46dd41f216524ccbb299", - "protein_translation": "MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLSLITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLWFIESNIE", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0802" - ], - [ - "gene_synonym", - "GI:16128781" - ], - [ - "gene_synonym", - "EcoGene:EG12134" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA67" - ], - [ - "gene_synonym", - "b0813" - ], - [ - "gene_synonym", - "JW0798" - ], - [ - "gene_synonym", - "GeneID:947045" - ], - [ - "gene_synonym", - "ybiF" - ], - [ - "gene_synonym", - "ASAP:ABE-0002779" - ], - [ - "gene_synonym", - "NP_415334.1" - ], - [ - "gene_synonym", - "rhtA" - ] - ], - "dna_sequence": "ATGCCTGGTTCATTACGTAAAATGCCGGTCTGGTTACCAATAGTCATATTGCTCGTTGCCATGGCGTCTATTCAGGGTGGAGCCTCGTTAGCTAAGTCACTTTTTCCTCTGGTGGGCGCACCGGGTGTCACTGCGCTGCGTCTGGCATTAGGAACGCTGATCCTCATCGCGTTCTTTAAGCCATGGCGACTGCGCTTTGCCAAAGAGCAACGGTTACCGCTGTTGTTTTACGGCGTTTCGCTGGGTGGGATGAATTATCTTTTTTATCTTTCTATTCAGACAGTACCGCTGGGTATTGCGGTGGCGCTGGAGTTCACCGGACCACTGGCGGTGGCGCTGTTCTCTTCTCGTCGCCCGGTAGATTTCGTCTGGGTTGTGCTGGCGGTTCTTGGTCTGTGGTTCCTGCTACCGCTGGGGCAAGACGTTTCCCATGTCGATTTAACCGGCTGTGCGCTGGCACTGGGGGCCGGGGCTTGTTGGGCTATTTACATTTTAAGTGGGCAACGCGCAGGAGCGGAACATGGCCCTGCGACGGTGGCAATTGGTTCGTTGATTGCAGCGTTAATTTTCGTGCCAATTGGAGCGCTTCAGGCTGGTGAAGCACTCTGGCACTGGTCGGTTATTCCATTGGGTCTGGCTGTCGCTATTCTCTCGACCGCTCTGCCTTATTCGCTGGAAATGATTGCCCTCACCCGTTTGCCAACACGGACATTTGGTACGCTGATGAGCATGGAACCGGCGCTGGCTGCCGTTTCCGGGATGATTTTCCTCGGAGAAACACTGACACCCATACAGCTACTGGCGCTCGGCGCTATCATCGCCGCTTCAATGGGGTCTACGCTGACAGTACGCAAAGAGAGCAAAATAAAAGAATTAGACATTAATTAA", - "dna_sequence_length": 888, - "functions": [ - "threonine and homoserine efflux system" - ], - "id": "CDS_795", - "location": [ - [ - "NC_000913", - 850097, - "-", - 888 - ] - ], - "md5": "1f3512911e4c5652024d595515b7dd04", - "parent_gene": "", - "protein_md5": "8091372ffb1e79ebbdf2a52a58fbf354", - "protein_translation": "MPGSLRKMPVWLPIVILLVAMASIQGGASLAKSLFPLVGAPGVTALRLALGTLILIAFFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSSRRPVDFVWVVLAVLGLWFLLPLGQDVSHVDLTGCALALGAGACWAIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSVIPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTPIQLLALGAIIAASMGSTLTVRKESKIKELDIN", - "protein_translation_length": 295, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0803" - ], - [ - "gene_synonym", - "EcoGene:EG12135" - ], - [ - "gene_synonym", - "ompX" - ], - [ - "gene_synonym", - "b0814" - ], - [ - "gene_synonym", - "JW0799" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A917" - ], - [ - "gene_synonym", - "GeneID:944967" - ], - [ - "gene_synonym", - "ybiG" - ], - [ - "gene_synonym", - "GI:16128782" - ], - [ - "gene_synonym", - "ASAP:ABE-0002784" - ], - [ - "gene_synonym", - "NP_415335.1" - ] - ], - "dna_sequence": "ATGAAAAAAATTGCATGTCTTTCAGCACTGGCCGCAGTTCTGGCTTTCACCGCAGGTACTTCCGTAGCTGCGACTTCTACTGTAACTGGCGGTTACGCACAGAGCGACGCTCAGGGCCAAATGAACAAAATGGGCGGTTTCAACCTGAAATACCGCTATGAAGAAGACAACAGCCCGCTGGGTGTGATCGGTTCTTTCACTTACACCGAGAAAAGCCGTACTGCAAGCTCTGGTGACTACAACAAAAACCAGTACTACGGCATCACTGCTGGTCCGGCTTACCGCATTAACGACTGGGCAAGCATCTACGGTGTAGTGGGTGTGGGTTATGGTAAATTCCAGACCACTGAATACCCGACCTACAAACACGACACCAGCGACTACGGTTTCTCCTACGGTGCGGGTCTGCAGTTCAACCCGATGGAAAACGTTGCTCTGGACTTCTCTTACGAGCAGAGCCGTATTCGTAGCGTTGACGTAGGCACCTGGATTGCCGGTGTTGGTTACCGCTTCTAA", - "dna_sequence_length": 516, - "functions": [ - "outer membrane protein X" - ], - "id": "CDS_796", - "location": [ - [ - "NC_000913", - 850450, - "+", - 516 - ] - ], - "md5": "c7fee4c9437d2aa3c5fbbe1a443e57a2", - "parent_gene": "", - "protein_md5": "1f42062652e327a66a7fccdab455504e", - "protein_translation": "MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKMGGFNLKYRYEEDNSPLGVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASIYGVVGVGYGKFQTTEYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDVGTWIAGVGYRF", - "protein_translation_length": 171, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ybiP" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75785" - ], - [ - "gene_synonym", - "ECK0804" - ], - [ - "gene_synonym", - "JW0800" - ], - [ - "gene_synonym", - "NP_415336.1" - ], - [ - "gene_synonym", - "b0815" - ], - [ - "gene_synonym", - "EcoGene:EG13321" - ], - [ - "gene_synonym", - "opgE" - ], - [ - "gene_synonym", - "GI:16128783" - ], - [ - "gene_synonym", - "GeneID:945360" - ], - [ - "gene_synonym", - "ASAP:ABE-0002786" - ] - ], - "dna_sequence": "ATGAATTTAACCCTCAAAGAATCGCTTGTTACCCGTAGCCGGGTATTTAGCCCGTGGACTGCGTTCTACTTTTTACAGTCGCTATTAATTAACCTCGGCTTAGGTTACCCCTTCAGTTTGCTCTACACCGCTGCGTTTACGGCTATTTTGCTTTTGCTATGGCGAACATTGCCTCGCGTACAAAAAGTTCTGGTCGGTGTCAGTTCGCTGGTGGCGGCTTGTTATTTCCCTTTTGCTCAGGCCTACGGCGCGCCTAATTTCAATACATTGCTGGCATTGCACTCCACCAATATGGAAGAGTCGACCGAAATCCTGACGATTTTTCCGTGGTACAGCTACCTGGTCGGCTTATTTATTTTTGCGCTCGGCGTAATAGCAATCAGGCGAAAAAAAGAGAATGAAAAAGCGCGCTGGAATACCTTCGACAGCCTGTGTCTGGTATTCAGTGTGGCGACATTTTTTGTTGCTCCCGTGCAAAACCTGGCCTGGGGTGGCGTATTTAAACTGAAAGATACTGGCTATCCGGTATTTCGTTTTGCTAAGGATGTCATCGTCAATAATAACGAGGTGATTGAAGAGCAAGAACGGATGGCAAAACTTTCCGGAATGAAAGATACCTGGACGGTCACTGCCGTTAAGCCGAAGTATCAGACCTATGTGGTGGTGATCGGTGAAAGCGCGCGTCGCGATGCCCTCGGTGCCTTTGGCGGTCACTGGGACAATACCCCGTTTGCCAGCAGCGTTAACGGTTTGATATTTGCTGACTACATTGCCGCCAGTGGCTCCACGCAGAAATCGCTTGGCTTAACGCTCAATCGCGTTGTCGATGGCAAACCACAGTTTCAGGATAACTTTGTCACCCTGGCAAATCGCGCGGGCTTCCAGACCTGGTGGTTTTCCAACCAGGGTCAAATCGGCGAATACGATACCGCTATCGCCAGCATCGCCAAACGAGCAGATGAAGTGTACTTCCTGAAAGAAGGTAATTTTGAAGCAGATAAAAACACCAAAGACGAAGCGTTACTGGATATGACCGCTCAAGTGCTGGCGCAAGAGCACTCGCAACCGCAGCTGATTGTTCTACATCTGATGGGCTCACATCCGCAGGCCTGCGACAGGACACAAGGAAAATACGAAACCTTTGTGCAATCGAAAGAAACGTCGTGCTATCTCTATACCATGACGCAAACGGACGATTTACTGCGCAAGCTGTACGATCAGTTACGCAACAGCGGCAGCAGCTTCTCGCTGGTTTACTTTTCTGACCACGGTCTGGCCTTTAAAGAGCGCGGTAAAGACGTGCAATACCTTGCCCATGATGATAAATATCAGCAAAATTTCCAGGTGCCTTTTATGGTCATTTCCAGCGACGATAAAGCGCATCGTGTGATTAAAGCCCGCCGCTCAGCCAATGACTTCTTAGGCTTTTTCTCCCAGTGGACGGGGATTAAAGCGAAGGAAATTAACATCAAATACCCGTTTATATCTGAGAAGAAAGCCGGGCCGATATACATCACCAACTTCCAGTTACAGAAGGTGGATTACAACCATCTCGGAACCGATATTTTCGACCCGAAACCTTAA", - "dna_sequence_length": 1584, - "functions": [ - "OPG biosynthetic transmembrane phosphoethanolamine transferase" - ], - "id": "CDS_797", - "location": [ - [ - "NC_000913", - 852597, - "-", - 1584 - ] - ], - "md5": "86625a26ac0fb1e2219e55e0c98138ef", - "parent_gene": "", - "protein_md5": "40d4e1ed75e2940532daedd454bd6801", - "protein_translation": "MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTAAFTAILLLLWRTLPRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEESTEILTIFPWYSYLVGLFIFALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQNLAWGGVFKLKDTGYPVFRFAKDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQTYVVVIGESARRDALGAFGGHWDNTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVDGKPQFQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEVYFLKEGNFEADKNTKDEALLDMTAQVLAQEHSQPQLIVLHLMGSHPQACDRTQGKYETFVQSKETSCYLYTMTQTDDLLRKLYDQLRNSGSSFSLVYFSDHGLAFKERGKDVQYLAHDDKYQQNFQVPFMVISSDDKAHRVIKARRSANDFLGFFSQWTGIKAKEINIKYPFISEKKAGPIYITNFQLQKVDYNHLGTDIFDPKP", - "protein_translation_length": 527, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_009029995.1" - ], - [ - "gene_synonym", - "GI:635341463" - ], - [ - "gene_synonym", - "rybA" - ], - [ - "gene_synonym", - "b4705" - ], - [ - "gene_synonym", - "ECK4517" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0DKB3" - ], - [ - "gene_synonym", - "EcoGene:EG14500" - ], - [ - "gene_synonym", - "mntS" - ], - [ - "gene_synonym", - "GeneID:14678509" - ] - ], - "dna_sequence": "ATGAATGAGTTCAAGAGGTGTATGCGCGTGTTTAGTCATTCTCCCTTTAAAGTACGGTTAATGCTGCTCTCTATGTTGTGCGATATGGTCAACAACAAACCGCAGCAAGATAAACCTTCCGATAAATAG", - "dna_sequence_length": 129, - "functions": [ - "Mn(2)-response protein, MntR-repressed" - ], - "id": "CDS_798", - "location": [ - [ - "NC_000913", - 852997, - "-", - 129 - ] - ], - "md5": "532c736b2c3f366a671437ddf5de7a16", - "parent_gene": "", - "protein_md5": "94721a244e15a58e469f359676d70d5e", - "protein_translation": "MNEFKRCMRVFSHSPFKVRLMLLSMLCDMVNNKPQQDKPSDK", - "protein_translation_length": 42, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ybiQ" - ], - [ - "gene_synonym", - "NP_415338.1" - ], - [ - "gene_synonym", - "JW0801" - ], - [ - "gene_synonym", - "ECK0807" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9F1" - ], - [ - "gene_synonym", - "EcoGene:EG13322" - ], - [ - "gene_synonym", - "b0817" - ], - [ - "gene_synonym", - "GeneID:945437" - ], - [ - "gene_synonym", - "ASAP:ABE-0002793" - ], - [ - "gene_synonym", - "mntR" - ], - [ - "gene_synonym", - "GI:16128785" - ] - ], - "dna_sequence": "ATGAGTCGTCGCGCAGGTACGCCAACAGCAAAAAAAGTGACGCAGTTAGTGAACGTGGAAGAGCACGTTGAAGGGTTCCGCCAGGTCAGAGAGGCGCATCGGCGCGAGCTTATTGATGATTACGTTGAGCTGATTTCTGACTTGATCAGGGAAGTGGGGGAAGCTCGTCAGGTGGACATGGCTGCTCGTCTGGGAGTTTCGCAACCGACGGTGGCTAAAATGCTTAAGCGGCTGGCAACCATGGGGCTGATTGAAATGATCCCCTGGCGTGGCGTGTTTTTAACGGCAGAAGGAGAGAAGCTGGCGCAGGAAAGCCGCGAGCGACATCAGATAGTCGAAAATTTCTTGTTGGTGTTGGGCGTCAGTCCGGAAATCGCCCGTCGCGACGCGGAAGGCATGGAGCACCATGTTAGTGAAGAGACGCTCGACGCTTTTCGTTTGTTTACCCAGAAACACGGTGCCAAATGA", - "dna_sequence_length": 468, - "functions": [ - "Mn(2+)-responsive manganese regulon transcriptional regulator" - ], - "id": "CDS_799", - "location": [ - [ - "NC_000913", - 853183, - "+", - 468 - ] - ], - "md5": "cb5432c699273f16be4b8c90e6423008", - "parent_gene": "", - "protein_md5": "7b71740b12a1db903033d68260a33d5b", - "protein_translation": "MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLAQESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK", - "protein_translation_length": 155, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ybiR" - ], - [ - "gene_synonym", - "b0818" - ], - [ - "gene_synonym", - "JW0802" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75788" - ], - [ - "gene_synonym", - "ECK0808" - ], - [ - "gene_synonym", - "EcoGene:EG13323" - ], - [ - "gene_synonym", - "NP_415339.1" - ], - [ - "gene_synonym", - "GI:16128786" - ], - [ - "gene_synonym", - "GeneID:945438" - ], - [ - "gene_synonym", - "ASAP:ABE-0002795" - ] - ], - "dna_sequence": "ATGAGCCTGCCTTTTTTACGCACGCTGCAAGGCGATCGTTTTTTTCAGTTATTAATTCTTGTTGGTATCGGATTAAGCTTTTTCGTGCCCTTTGCACCGAAATCCTGGCCTGCTGCTATCGACTGGCACACCATCATCACCTTAAGCGGCCTGATGCTGCTGACCAAAGGTGTGGAGTTAAGCGGTTATTTTGATGTGCTGGGGCGCAAAATGGTGCGCCGCTTTGCTACGGAGCGTCGGCTGGCGATGTTTATGGTGCTGGCGGCGGCGCTGCTTTCTACCTTTCTGACCAACGATGTCGCGCTGTTTATTGTTGTTCCGCTGACTATCACGCTAAAAAGACTGTGTGAGATCCCGGTTAATCGGCTGATTATTTTTGAGGCGCTGGCAGTCAACGCTGGTTCGCTACTGACGCCAATTGGCAACCCGCAAAATATTCTTATCTGGGGACGTTCTGGTCTTTCGTTTGCCGGATTTATTGCCCAAATGGCACCGCTGGCTGGCGCAATGATGCTGACGCTCCTGCTCCTGTGCTGGTGTTGTTTCCCTGGAAAGGCGATGCAATACCATACGGGGGTGCAAACACCGGAGTGGAAACCGCGGCTGGTGTGGAGTTGTCTGGGGCTGTATATCGTCTTTCTGACGGCGCTGGAGTTCAAACAAGAGCTGTGGGGACTGGTGATTGTGGCGGCAGGCTTTGCGCTGCTGGCACGTCGCGTGGTGCTCAGTGTGGACTGGACGCTGCTGCTGGTGTTTATGGCGATGTTTATCGACGTCCATTTACTGACCCAGCTTCCAGCGTTGCAAGGCGTGTTGGGTAACGTGAGTCATCTATCTGAACCCGGGTTATGGTTAACGGCAATCGGTTTATCGCAGGTGATCAGTAACGTGCCGAGTACCATATTGTTGCTGAACTATGTGCCGCCGTCTTTATTACTGGTATGGGCGGTAAACGTAGGTGGCTTTGGGTTATTACCCGGATCGCTGGCAAATTTGATTGCGCTACGTATGGCGAACGATCGCCGCATCTGGTGGCGTTTCCATCTCTATTCAATACCGATGCTGTTGTGGGCGGCGTTGGTGGGATATGTTTTGTTAGTTATACTCCCGGCCAACTAG", 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"EcoGene:EG13324" - ], - [ - "gene_synonym", - "ECK0809" - ], - [ - "gene_synonym", - "ASAP:ABE-0002797" - ], - [ - "gene_synonym", - "ldtB" - ], - [ - "gene_synonym", - "NP_415340.1" - ], - [ - "gene_synonym", - "GI:16128787" - ] - ], - "dna_sequence": "ATGAATATGAAATTGAAAACATTATTCGCAGCGGCCTTCGCTGTTGTCGGCTTTTGCAGTACCGCCTCTGCGGTAACTTATCCTCTGCCAACCGACGGGAGTCGCCTGGTTGGTCAGAATCAGGTGATCACCATTCCTGAAGGTAACACTCAGCCGCTGGAGTATTTTGCCGCCGAGTACCAGATGGGGCTTTCCAATATGATGGAAGCGAACCCGGGTGTGGATACCTTCCTGCCGAAAGGCGGTACTGTACTGAACATTCCGCAGCAGCTGATCCTGCCGGATACCGTTCATGAAGGCATCGTCATTAACAGTGCTGAGATGCGTCTTTATTACTATCCGAAAGGGACCAACACCGTTATCGTGCTGCCGATCGGCATTGGTCAGTTAGGCAAAGATACGCCTATCAACTGGACCACCAAAGTTGAGCGTAAAAAAGCAGGCCCGACCTGGACGCCGACCGCCAAAATGCACGCAGAGTACCGCGCTGCGGGCGAACCGCTTCCGGCTGTCGTTCCGGCAGGTCCGGATAACCCGATGGGGCTGTATGCACTCTATATCGGTCGCCTGTATGCTATCCATGGCACCAACGCCAACTTCGGTATCGGCCTGCGTGTAAGTCATGGTTGTGTGCGTCTGCGTAACGAAGACATCAAATTCCTGTTCGAGAAAGTACCGGTCGGTACCCGCGTACAGTTTATTGATGAGCCGGTAAAAGCGACCACCGAGCCAGACGGCAGCCGTTATATTGAAGTCCATAACCCGCTGTCTACCACCGAAGCCCAGTTTGAAGGTCAGGAAATTGTGCCAATTACCCTGACGAAGAGCGTGCAGACAGTGACCGGTCAGCCAGATGTTGACCAGGTTGTTCTTGATGAAGCGATTAAAAACCGCTCCGGGATGCCGGTTCGTCTGAATTAA", - "dna_sequence_length": 921, - "functions": [ - "L,D-transpeptidase linking Lpp to murein" - ], - "id": "CDS_801", - "location": [ - [ - "NC_000913", - 855744, - "-", - 921 - ] - ], - "md5": "694bfdfae5c1f5b5ed6e5085e896e6ef", - "parent_gene": "", - "protein_md5": "72687302febc400acb6aaa54e09d2bef", - "protein_translation": "MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVITIPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKSVQTVTGQPDVDQVVLDEAIKNRSGMPVRLN", - "protein_translation_length": 306, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0820" - ], - [ - "gene_synonym", - "JW0804" - ], - [ - "gene_synonym", - "ybiT" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9U3" - ], - [ - "gene_synonym", - "EcoGene:EG13325" - ], - [ - "gene_synonym", - "GeneID:945440" - ], - [ - "gene_synonym", - "GI:16128788" - ], - [ - "gene_synonym", - "ECK0810" - ], - [ - "gene_synonym", - "ASAP:ABE-0002801" - ], - [ - "gene_synonym", - "NP_415341.1" - ] - ], - "dna_sequence": "GTGTTAGTTTCCAGTAACGTCACCATGCAGTTCGGCAGTAAGCCGTTGTTTGAAAACATTTCCGTCAAATTTGGCGGCGGCAACCGTTACGGCCTGATTGGCGCGAACGGTAGTGGTAAATCCACCTTTATGAAGATCCTCGGCGGCGACCTTGAGCCGACGCTGGGTAACGTTTCCCTCGATCCCAACGAGCGCATTGGTAAACTGCGTCAGGATCAGTTTGCCTTTGAAGAGTTCACTGTGCTGGATACGGTGATCATGGGGCATAAAGAGTTGTGGGAAGTGAAGCAGGAGCGCGACCGCATCTATGCTTTGCCGGAAATGAGTGAAGAAGACGGCTATAAAGTGGCCGATCTGGAAGTTAAATACGGCGAAATGGACGGTTACTCTGCGGAAGCTCGCGCCGGTGAACTGTTGCTTGGCGTGGGAATTCCAGTGGAACAGCACTACGGCCCGATGAGTGAAGTTGCTCCTGGCTGGAAGCTGCGTGTGCTTCTGGCGCAGGCGCTGTTTGCTGATCCGGATATTCTCCTGCTCGACGAACCGACCAACAACCTCGACATCGACACCATTCGCTGGCTGGAACAGGTGCTGAACGAGCGTGACAGCACCATGATCATCATCTCGCACGACCGTCACTTCCTTAACATGGTCTGTACCCACATGGCGGATCTGGATTACGGCGAGCTGCGCGTTTATCCGGGTAACTACGATGAGTACATGACGGCGGCGACCCAGGCGCGTGAACGTCTGCTGGCCGATAACGCCAAGAAGAAAGCGCAGATTGCTGAGTTGCAATCTTTCGTTAGCCGCTTTAGCGCCAACGCCTCGAAATCTCGCCAGGCAACTTCGCGCGCGCGCCAGATTGATAAAATCAAACTGGAAGAGGTGAAAGCCTCCAGCCGTCAGAACCCGTTCATCCGTTTTGAACAGGATAAGAAACTGTTCCGTAACGCGCTGGAAGTGGAAGGTCTGACCAAAGGGTTTGATAACGGTCCGCTGTTTAAAAATCTCAACCTGCTGCTGGAAGTGGGTGAAAAACTGGCGGTACTGGGTACCAACGGCGTCGGTAAATCAACGCTGCTGAAAACGCTGGTGGGCGATCTGCAACCGGACAGCGGCACCGTAAAATGGTCTGAGAACGCGCGCATTGGTTACTATGCTCAGGACCACGAATATGAGTTTGAAAATGATCTGACCGTGTTCGAATGGATGAGCCAGTGGAAGCAGGAAGGCGATGACGAGCAGGCGGTACGCAGTATTCTCGGTCGTTTGCTGTTCAGCCAGGACGACATCAAAAAGCCAGCTAAAGTGCTTTCCGGTGGGGAAAAAGGGCGGATGCTGTTTGGTAAGTTAATGATGCAGAAGCCGAACATTCTGATCATGGACGAACCGACCAACCACCTGGATATGGAATCCATTGAGTCGCTGAACATGGCACTGGAACTGTATCAGGGCACGCTGATCTTTGTTTCACACGACCGTGAGTTCGTAAGCTCCCTGGCGACCCGCATTCTGGAAATCACCCCGGAACGCGTGATCGACTTTAGCGGTAATTACGAAGATTACCTGCGTAGTAAAGGGATCGAGTAA", - "dna_sequence_length": 1593, - "functions": [ - "ABC-F family putative regulatory ATPase" - ], - "id": "CDS_802", - "location": [ - [ - "NC_000913", - 855963, - "+", - 1593 - ] - ], - "md5": "2aa1e65af443256450ca319ef97a454d", - "parent_gene": "", - "protein_md5": "d277b45738920b638acde3ad66f9bac9", - "protein_translation": "MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRIYALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSENARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYLRSKGIE", - "protein_translation_length": 530, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0821" - ], - [ - "gene_synonym", - "ECK0811" - ], - [ - "gene_synonym", - "ASAP:ABE-0002804" - ], - [ - "gene_synonym", - "ybiU" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75791" - ], - [ - "gene_synonym", - "EcoGene:EG13326" - ], - [ - "gene_synonym", - "JW0805" - ], - [ - "gene_synonym", - "NP_415342.1" - ], - [ - "gene_synonym", - "GI:16128789" - ], - [ - "gene_synonym", - "GeneID:945439" - ] - ], - "dna_sequence": "ATGGCTTCTACTTTTACCAGCGACACATTGCCTGCCGATCACAAAGCAGCTATCCGTCAGATGAAGCACGCGCTGCGGGCGCAGCTTGGCGACGTCCAGCAGATCTTTAATCAGCTAAGCGATGACATTGCCACGCGAGTGGCTGAAATCAACGCACTCAAAGCACAGGGCGATGCCGTCTGGCCGGTGCTGTCTTATGCCGATATCAAAGCAGGTCATGTTACTGCAGAGCAGCGCGAACAGATTAAACGTCGCGGTTGTGCGGTGATAAAAGGCCATTTCCCCCGCGAACAAGCGCTAGGCTGGGATCAGTCGATGCTGGACTATCTGGACCGCAACCGCTTTGACGAGGTCTACAAAGGCCCCGGCGATAATTTCTTCGGGACGCTCAGCGCTTCACGTCCCGAGATTTACCCCATCTACTGGTCGCAGGCGCAAATGCAGGCCCGCCAGAGTGAAGAAATGGCGAATGCGCAGTCGTTTCTCAATCGTCTGTGGACATTTGAAAGTGATGGAAAGCAATGGTTTAACCCGGATGTGAGCGTCATCTACCCTGACCGTATCCGCCGCCGTCCGCCCGGAACGACCTCCAAAGGTCTTGGAGCGCATACCGACTCCGGGGCACTGGAACGCTGGCTGCTTCCAGCGTATCAGCGCGTTTTCGCCAACGTCTTTAATGGCAATCTGGCGCAATATGATCCCTGGCATGCGGCACATCGTACGGAAGTTGAAGAGTACACGGTGGACAACACCACCAAATGTTCCGTGTTTCGGACATTCCAGGGCTGGACAGCGCTCTCTGATATGCTGCCTGGTCAGGGGCTGCTGCACGTCGTGCCCATTCCTGAAGCTATGGCGTACGTACTGTTACGTCCGCTGCTTGATGATGTGCCGGAGGATGAACTGTGCGGCGTAGCGCCCGGAAGAGTATTGCCGGTATCAGAGCAATGGCATCCACTGTTGATTGAGGCGTTAACCAGCATTCCAAAACTCGAAGCCGGAGACTCCGTCTGGTGGCACTGCGACGTCATCCATTCCGTTGCCCCCGTTGAAAATCAACAAGGTTGGGGCAACGTGATGTACATTCCTGCGGCACCGATGTGCGAGAAAAATCTTGCCTACGCGCACAAGGTGAAGGCCGCACTGGAAAAAGGCGCATCGCCGGGCGACTTCCCGCGCGAGGACTATGAAACAAACTGGGAAGGACGCTTTACGCTTGCCGACCTCAACATTCACGGTAAGCGAGCGTTGGGCATGGATGTTTGA", - "dna_sequence_length": 1266, - "functions": [ - "DUF1479 family protein" - ], - "id": "CDS_803", - "location": [ - [ - "NC_000913", - 859061, - "-", - 1266 - ] - ], - "md5": "06beb28243686f6c3581302dec79a212", - "parent_gene": "", - "protein_md5": "42f0729f16c0ba45bb1517418f0feaa7", - "protein_translation": "MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIATRVAEINALKAQGDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGWDQSMLDYLDRNRFDEVYKGPGDNFFGTLSASRPEIYPIYWSQAQMQARQSEEMANAQSFLNRLWTFESDGKQWFNPDVSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQRVFANVFNGNLAQYDPWHAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYAHKVKAALEKGASPGDFPREDYETNWEGRFTLADLNIHGKRALGMDV", - "protein_translation_length": 421, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0812" - ], - [ - "gene_synonym", - "b0822" - ], - [ - "gene_synonym", - "ybiV" - ], - [ - "gene_synonym", - "GI:16128790" - ], - [ - "gene_synonym", - "JW0806" - ], - [ - "gene_synonym", - "NP_415343.1" - ], - [ - "gene_synonym", - "supH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75792" - ], - [ - "gene_synonym", - "EcoGene:EG13327" - ], - [ - "gene_synonym", - "GeneID:945432" - ], - [ - "gene_synonym", - "ASAP:ABE-0002807" - ] - ], - "dna_sequence": "ATGAGCGTAAAAGTTATCGTCACAGACATGGACGGTACTTTTCTTAACGACGCCAAAACGTACAACCAACCACGTTTTATGGCGCAATATCAGGAACTGAAAAAGCGCGGCATTAAGTTCGTTGTTGCCAGCGGTAATCAGTATTACCAGCTTATTTCATTCTTTCCTGAGCTAAAGGATGAGATCTCTTTTGTCGCGGAAAACGGCGCACTGGTTTACGAACATGGCAAGCAGTTGTTCCACGGCGAACTGACCCGACATGAATCGCGGATTGTTATTGGCGAGTTGCTAAAAGATAAGCAACTCAATTTTGTCGCCTGCGGTCTGCAAAGTGCATATGTCAGCGAAAATGCCCCCGAAGCATTTGTCGCACTGATGGCAAAACACTACCATCGCCTGAAACCTGTAAAAGATTATCAGGAGATTGACGACGTACTGTTCAAGTTTTCGCTCAACCTGCCGGATGAACAAATCCCGTTAGTGATCGACAAACTGCACGTAGCGCTCGATGGCATTATGAAACCCGTTACCAGTGGTTTTGGCTTTATCGACCTGATTATTCCCGGTCTACATAAAGCAAACGGTATTTCGCGGTTACTGAAACGCTGGGATCTGTCACCGCAAAATGTGGTAGCGATTGGCGACAGCGGTAACGATGCGGAGATGCTGAAAATGGCGCGTTATTCCTTTGCGATGGGCAATGCTGCGGAAAACATTAAACAAATCGCCCGTTACGCTACCGATGATAATAATCATGAAGGCGCGCTGAATGTGATTCAGGCGGTGCTGGATAACACATCCCCTTTTAACAGCTGA", - "dna_sequence_length": 816, - "functions": [ - "sugar phosphatase", - "fructose-1-P/ribose-5-P/glucose-6-P phosphatase" - ], - "id": "CDS_804", - "location": [ - [ - "NC_000913", - 860028, - "-", - 816 - ] - ], - "md5": "5cd3e67454f54dec43bdd8b2bea674d5", - "parent_gene": "", - "protein_md5": "3b2c55884d5bf82f5e0399197e3ae062", - "protein_translation": "MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS", - "protein_translation_length": 271, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0813" - ], - [ - "gene_synonym", - "JW0807" - ], - [ - "gene_synonym", - "b0823" - ], - [ - "gene_synonym", - "GeneID:945444" - ], - [ - "gene_synonym", - "GI:16128791" - ], - [ - "gene_synonym", - "ybiW" - ], - [ - "gene_synonym", - "pflF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75793" - ], - [ - "gene_synonym", - "NP_415344.1" - ], - [ - "gene_synonym", - "EcoGene:EG13328" - ], - [ - "gene_synonym", - "ASAP:ABE-0002810" - ] - ], - "dna_sequence": "ATGACCACACTGAAACTGGACACGCTCAGCGACCGCATTAAAGCGCACAAAAATGCGCTGGTGCATATTGTGAAACCGCCAGTCTGTACCGAGCGCGCGCAGCACTATACCGAGATGTATCAACAACATCTCGATAAGCCGATCCCGGTACGTCGCGCGCTGGCACTGGCGCATCACCTGGCGAATCGCACCATCTGGATCAAACACGATGAGTTGATCATTGGCAACCAGGCAAGCGAAGTTCGCGCCGCGCCGATCTTCCCGGAATATACTGTCTCGTGGATCGAAAAAGAGATTGATGATCTGGCAGATCGTCCCGGTGCTGGCTTTGCGGTGAGCGAAGAGAACAAACGCGTTCTGCATGAAGTGTGCCCGTGGTGGCGCGGTCAGACCGTACAGGATCGCTGCTACGGCATGTTTACCGATGAGCAAAAAGGTCTGCTGGCGACCGGAATCATTAAAGCGGAAGGCAATATGACCTCCGGCGATGCGCACCTGGCGGTGAATTTCCCGCTGCTGCTGGAAAAAGGGCTTGATGGTCTGCGCGAGGAAGTAGCGGAACGTCGCTCGCGCATCAACCTGACGGTGCTGGAAGATTTACACGGTGAGCAATTCCTGAAAGCGATTGATATCGTGCTGGTGGCAGTCAGTGAACACATTGAACGTTTCGCTGCCCTGGCGCGTGAAATGGCCGCGACCGAAACCCGCGAAAGCCGTCGCGATGAACTGCTGGCGATGGCAGAAAACTGCGATCTTATCGCCCACCAGCCGCCGCAGACTTTCTGGCAGGCGCTGCAACTGTGTTACTTCATCCAGTTGATTTTGCAGATCGAATCTAACGGTCACTCAGTATCGTTTGGTCGTATGGACCAGTATCTCTACCCGTACTATCGCCGCGACGTTGAACTCAACCAGACGCTGGATCGCGAACACGCCATCGAGATGCTGCATAGCTGCTGGCTGAAACTGCTGGAAGTGAACAAGATCCGCTCCGGCTCACACTCAAAAGCCTCTGCGGGAAGTCCGCTGTATCAGAACGTCACTATTGGCGGGCAAAATCTGGTTGATGGTCAACCAATGGACGCGGTGAATCCACTCTCTTACGCGATCCTCGAATCCTGCGGTCGCCTGCGTTCCACTCAGCCTAACCTCAGCGTGCGTTACCATGCAGGAATGAGCAACGATTTCCTCGACGCCTGCGTACAGGTGATCCGTTGCGGCTTCGGGATGCCGGCGTTCAACAACGACGAAATCGTGATCCCGGAATTTATTAAACTCGGTATTGAACCGCAGGACGCTTATGACTACGCAGCGATTGGTTGTATAGAAACCGCCGTCGGTGGCAAATGGGGCTATCGCTGTACCGGCATGAGCTTTATCAACTTCGCCCGCGTGATGCTGGCGGCGCTGGAAGGCGGGCATGATGCCACCAGCGGCAAAGTGTTCCTGCCACAAGAAAAAGCGTTGTCGGCAGGTAACTTCAACAACTTCGATGAAGTGATGGACGCGTGGGATACGCAAATCCGTTACTACACCCGCAAATCAATCGAAATCGAATATGTCGTCGACACCATGCTGGAAGAGAACGTGCACGATATTCTCTGCTCGGCGCTGGTGGATGACTGTATTGAGCGAGCGAAAAGTATCAAGCAAGGCGGCGCGAAATATGACTGGGTTTCTGGCCTGCAGGTCGGCATTGCCAACCTCGGCAACAGCCTGGCGGCAGTGAAGAAACTGGTGTTTGAACAAGGTGCGATTGGTCAGCAACAGCTTGCTGCCGCACTGGCAGATGACTTCGACGGCCTGACTCACGAGCAGCTGCGTCAGCGGCTGATTAACGGTGCGCCGAAGTACGGCAACGACGATGATACTGTCGATACGCTGCTGGCTCGCGCTTATCAGACCTATATCGACGAACTGAAACAGTACCATAATCCGCGCTACGGTCGTGGTCCGGTTGGCGGCAACTATTACGCGGGTACGTCATCAATCTCCGCTAACGTACCGTTTGGCGCGCAGACTATGGCAACACCGGACGGGCGTAAAGCCCACACCCCGCTGGCAGAAGGCGCAAGCCCGGCCTCCGGTACTGACCATCTTGGCCCTACTGCGGTCATTGGCTCAGTGGGTAAACTGCCTACGGCAGCGATTCTCGGCGGCGTGTTGCTCAACCAGAAACTGAATCCGGCAACGCTGGAGAACGAATCTGACAAGCAGAAACTGATGATCCTGCTGCGTACCTTCTTTGAAGTGCATAAAGGCTGGCATATTCAGTACAACATCGTTTCCCGCGAAACGCTGCTGGATGCGAAAAAACATCCCGATCAGTATCGCGATCTGGTAGTGCGTGTCGCGGGCTATTCCGCGTTCTTCACCGCGCTCTCTCCAGACGCTCAGGACGATATCATCGCCCGTACTGAACATATGCTGTAA", 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"MTTLKLDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHLDKPIPVRRALALAHHLANRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDLADRPGAGFAVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMTSGDAHLAVNFPLLLEKGLDGLREEVAERRSRINLTVLEDLHGEQFLKAIDIVLVAVSEHIERFAALAREMAATETRESRRDELLAMAENCDLIAHQPPQTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRDVELNQTLDREHAIEMLHSCWLKLLEVNKIRSGSHSKASAGSPLYQNVTIGGQNLVDGQPMDAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLAALEGGHDATSGKVFLPQEKALSAGNFNNFDEVMDAWDTQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGIANLGNSLAAVKKLVFEQGAIGQQQLAAALADDFDGLTHEQLRQRLINGAPKYGNDDDTVDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAGTSSISANVPFGAQTMATPDGRKAHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGGVLLNQKLNPATLENESDKQKLMILLRTFFEVHKGWHIQYNIVSRETLLDAKKHPDQYRDLVVRVAGYSAFFTALSPDAQDDIIARTEHML", - "protein_translation_length": 810, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945445" - ], - [ - "gene_synonym", - "ybiY" - ], - [ - "gene_synonym", - "ASAP:ABE-0002812" - ], - [ - "gene_synonym", - "b0824" - ], - [ - "gene_synonym", - "ECK0814" - ], - [ - "gene_synonym", - "pflE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75794" - ], - [ - "gene_synonym", - "JW0808" - ], - [ - "gene_synonym", - "EcoGene:EG13470" - ], - [ - "gene_synonym", - "GI:226524704" - ], - [ - "gene_synonym", - "NP_415345.2" - ] - ], - "dna_sequence": "ATGATTTTCAATATTCAGCGCTACTCGACCCATGATGGCCCCGGTATCCGCACGGTCGTATTTCTTAAAGGCTGTTCGCTGGGCTGCCGCTGGTGTCAGAACCCGGAAAGCCGCGCCCGCACGCAGGATCTGCTGTATGACGCACGACTGTGTCTGGAAGGCTGCGAGCTGTGCGCTAAGGCCGCGCCGGAAGTGATTGAGCGCGCGCTGAATGGTTTGCTTATTCATCGGGAAAAGTTAACCCCGGAGCATCTGACGGCGTTAACCGACTGCTGTCCGACACAGGCATTAACCGTGTGTGGTGAAGTGAAAAGCGTTGAGGAGATCATGACGACCGTTCTGCGCGATAAACCGTTTTACGATCGCAGCGGCGGCGGTTTAACGCTTTCGGGTGGTGAGCCCTTTATGCAGCCGGAAATGGCGATGGCGCTACTGCAAGCCAGCCACGAGGCAGGCATTCATACTGCGGTAGAAACCTGTCTGCATGTGCCGTGGAAATATATCGCCCCTTCTCTGCCCTATATCGATCTGTTTCTTGCCGATTTAAAACACGTTGCCGACGCGCCGTTTAAACAGTGGACCGACGGTAACGCCGCCAGAGTGCTGGATAACCTGAAAAAACTCGCCGCAGCGGGCAAAAAAATCATTATCCGCGTGCCGCTGATTCAGGGCTTTAATGCCGACGAAACCTCTGTAAAAGCCATTACCGATTTTGCCGCCGACGAGCTGCACGTTGGCGAAATTCATTTTCTGCCCTACCACACGCTGGGCATCAACAAATATCACTTACTTAATCTGCCCTATGACGCCCCGGAAAAACCGCTTGATGCGCCAGAACTGCTCGACTTTGCCCAGCAGTATGCCTGCCAGAAAGGGTTAACCGCGACCTTACGAGGATAA", - "dna_sequence_length": 900, - "functions": [ - "putative pyruvate formate lyase activating 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], - [ - "gene_synonym", - "GI:90111174" - ], - [ - "gene_synonym", - "JW5109" - ], - [ - "gene_synonym", - "EcoGene:EG13471" - ] - ], - "dna_sequence": "ATGGAACTGTATCTGGATACTTCAGACGTTGTTGCGGTGAAGGCGCTGTCACGTATTTTTCCGCTGGCGGGTGTGACCACTAACCCAAGCATTATCGCCGCGGGTAAAAAACCGCTGGATGTTGTGCTTCCGCAACTTCATGAAGCGATGGGCGGTCAGGGGCGTCTGTTTGCCCAGGTAATGGCTACCACTGCCGAAGGGATGGTTAATGACGCGCTTAAGCTGCGTTCTATTATTGCGGATATCGTGGTGAAAGTTCCGGTGACCGCCGAGGGGCTGGCAGCTATTAAGATGTTAAAAGCGGAAGGGATTCCGACGCTGGGAACCGCGGTATATGGCGCAGCACAAGGGCTGCTGTCGGCGCTGGCAGGTGCGGAATATGTTGCGCCTTACGTTAATCGTATTGATGCTCAGGGCGGTAGCGGCATTCAGACTGTGACCGACTTACACCAGTTATTGAAAATGCATGCGCCGCAGGCGAAAGTGCTGGCAGCGAGTTTCAAAACCCCGCGTCAGGCGCTGGACTGCTTACTGGCAGGATGTGAATCAATTACTCTGCCACTGGATGTGGCACAACAGATGATTAGCTATCCGGCGGTTGATGCCGCTGTGGCGAAGTTTGAGCAGGACTGGCAGGGAGCGTTTGGCAGAACGTCGATTTAA", - "dna_sequence_length": 663, - "functions": [ - "fructose-6-phosphate aldolase 1" - ], - "id": "CDS_807", - "location": [ - [ - "NC_000913", - 863642, - "+", - 663 - ] - ], - "md5": "5c974f81e088821139e3474dcfeb2cf8", - "parent_gene": "", - "protein_md5": "8bf60ff4a252319a1b889b66e4ab2040", - "protein_translation": "MELYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLDVVLPQLHEAMGGQGRLFAQVMATTAEGMVNDALKLRSIIADIVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQAKVLAASFKTPRQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQDWQGAFGRTSI", - "protein_translation_length": 220, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128794" - ], - [ - "gene_synonym", - "GeneID:945452" - ], - [ - "gene_synonym", - "ECK0816" - ], - [ - "gene_synonym", - "chlN" - ], - [ - "gene_synonym", - "b0826" - ], - [ - "gene_synonym", - "NP_415347.1" - ], - [ - "gene_synonym", - "moeB" - ], - [ - "gene_synonym", - "EcoGene:EG10154" - ], - [ - "gene_synonym", - "JW0810" - ], - [ - "gene_synonym", - "ASAP:ABE-0002820" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P12282" - ] - ], - "dna_sequence": "ATGGCGGAACTCAGCGATCAGGAGATGCTGCGCTACAACCGGCAAATCATTCTGCGCGGCTTTGATTTTGACGGCCAGGAGGCGCTGAAAGATTCTCGCGTGCTGATAGTGGGCCTGGGCGGCCTCGGCTGTGCAGCCTCGCAGTATCTGGCAAGCGCCGGTGTCGGTAACCTGACGCTGCTCGACTTCGACACGGTTTCGCTCTCGAATCTGCAACGCCAGACACTGCACAGTGATGCCACGGTCGGGCAACCGAAGGTGGAATCCGCCCGTGACGCCCTGACGCGGATCAACCCACATATCGCGATTACGCCAGTCAATGCACTGCTGGATGACGCAGAACTTGCAGCATTGATTGCTGAACACGATCTGGTGCTCGACTGTACGGATAACGTTGCGGTACGTAATCAACTGAACGCAGGCTGTTTTGCCGCGAAGGTACCGCTGGTTTCCGGCGCGGCAATTCGTATGGAAGGTCAAATCACCGTCTTTACTTATCAGGACGGTGAACCGTGCTATCGCTGCCTTAGCCGTTTGTTTGGTGAAAATGCATTAACCTGCGTGGAAGCAGGCGTAATGGCACCGTTGATCGGCGTAATTGGTTCGTTGCAGGCAATGGAAGCGATCAAAATGCTGGCAGGTTATGGCAAACCGGCCAGCGGGAAAATCGTCATGTACGATGCGATGACCTGTCAGTTTCGCGAAATGAAACTGATGCGTAATCCGGGGTGTGAGGTGTGTGGGCAGTAA", - "dna_sequence_length": 750, - "functions": [ - "molybdopterin synthase sulfurylase" - ], - "id": "CDS_808", - "location": [ - [ - "NC_000913", - 865129, - "-", - 750 - ] - ], - "md5": "5486ee291bacc4f2db1bde30744f81f6", - "parent_gene": "", - "protein_md5": "98b2e1906ad65f44045755ea010c6c0f", - "protein_translation": "MAELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQITVFTYQDGEPCYRCLSRLFGENALTCVEAGVMAPLIGVIGSLQAMEAIKMLAGYGKPASGKIVMYDAMTCQFREMKLMRNPGCEVCGQ", - "protein_translation_length": 249, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128795" - ], - [ - "gene_synonym", - "ECK0817" - ], - [ - "gene_synonym", - "b0827" - ], - [ - "gene_synonym", - "GeneID:945454" - ], - [ - "gene_synonym", - "chlE" - ], - [ - "gene_synonym", - "NP_415348.1" - ], - [ - "gene_synonym", - "EcoGene:EG10153" - ], - [ - "gene_synonym", - "moeA" - ], - [ - "gene_synonym", - "narE" - ], - [ - "gene_synonym", - "JW0811" - ], - [ - "gene_synonym", - "bisB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P12281" - ], - [ - "gene_synonym", - "ASAP:ABE-0002823" - ] - ], - "dna_sequence": "ATGGAATTTACCACCGGATTGATGTCGCTCGACACCGCGCTTAATGAGATGCTTTCTCGCGTCACCCCACTGACCGCCCAGGAAACGCTGCCACTGGTACAGTGTTTTGGTCGTATTCTGGCGAGCGATGTCGTTTCGCCGCTTGATGTTCCGGGGTTTGATAACTCCGCAATGGACGGCTACGCGGTGCGTTTAGCCGATATTGCCTCCGGGCAACCGCTGCCCGTTGCCGGTAAATCCTTTGCCGGTCAGCCATACCATGGTGAATGGCCTGCGGGTACCTGCATTCGTATTATGACCGGTGCGCCGGTGCCGGAAGGCTGCGAAGCGGTGGTGATGCAGGAGCAGACTGAACAAATGGACAATGGCGTGCGTTTTACTGCTGAAGTGCGTAGCGGGCAAAATATTCGCCGTCGCGGTGAAGATATCTCTGCAGGTGCGGTTGTTTTCCCGGCGGGAACTCGCCTGACTACCGCAGAGCTGCCAGTAATTGCTTCACTGGGGATTGCCGAAGTTCCGGTGATTCGTAAAGTGCGTGTAGCGCTTTTTTCTACCGGTGATGAACTCCAGTTGCCCGGTCAGCCGCTGGGCGACGGCCAAATCTACGATACCAACCGTCTCGCCGTACACCTGATGTTAGAACAGTTGGGATGCGAGGTAATTAACTTAGGGATTATCCGCGACGATCCCCATGCCCTGCGCGCCGCATTTATTGAAGCCGACAGCCAGGCGGATGTGGTGATCAGTTCCGGCGGTGTTTCAGTGGGTGAGGCGGATTACACCAAAACGATTCTTGAAGAGCTGGGGGAGATCGCCTTCTGGAAGCTGGCGATTAAACCAGGTAAACCGTTCGCGTTCGGTAAACTCAGCAATAGCTGGTTCTGCGGCCTGCCGGGCAACCCGGTTTCAGCGACGCTGACCTTCTATCAACTGGTACAGCCTTTGCTGGCAAAACTAAGCGGTAACACCGCCAGCGGCCTGCCCGCGCGCCAGCGCGTACGCACAGCGTCCCGCCTGAAAAAAACGCCAGGACGTCTTGATTTCCAGCGCGGCGTGCTGCAACGCAACGCCGATGGCGAACTGGAAGTGACGACCACCGGACATCAGGGTTCACATATATTTAGCTCCTTTAGCCTCGGCAACTGCTTTATCGTGCTGGAACGCGATCGCGGCAATGTGGAAGTGGGCGAATGGGTGGAAGTAGAACCGTTTAACGCGTTGTTCGGAGGCCTGTAA", 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"gene_synonym", - "EcoGene:EG12407" - ], - [ - "gene_synonym", - "iaaA" - ], - [ - "gene_synonym", - "b0828" - ], - [ - "gene_synonym", - "ECK0818" - ], - [ - "gene_synonym", - "spt" - ], - [ - "gene_synonym", - "ASAP:ABE-0002828" - ], - [ - "gene_synonym", - "ybiK" - ], - [ - "gene_synonym", - "JW0812" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37595" - ] - ], - "dna_sequence": "ATGGGCAAAGCAGTCATTGCAATTCATGGTGGCGCAGGTGCAATTAGCCGCGCGCAGATGAGTCTGCAACAGGAATTACGCTACATCGAGGCGTTGTCTGCCATTGTTGAAACCGGGCAGAAAATGCTGGAAGCGGGCGAAAGTGCGCTGGATGTGGTGACGGAAGCGGTGCGTCTGCTGGAAGAGTGTCCACTGTTTAACGCCGGAATTGGCGCTGTCTTTACGCGTGATGAAACCCATGAACTGGACGCCTGTGTGATGGATGGTAACACCCTGAAAGCCGGTGCGGTGGCGGGCGTTAGTCATCTGCGTAATCCGGTTCTTGCCGCCCGGCTGGTGATGGAGCAAAGCCCGCATGTGATGATGATTGGCGAAGGGGCAGAAAATTTTGCGTTTGCTCGTGGCATGGAGCGCGTCTCGCCGGAGATTTTCTCCACGTCTTTGCGTTATGAACAACTACTGGCAGCGCGCAAGGAAGGGGCAACCGTCCTCGACCATAGCGGTGCGCCACTGGATGAAAAACAGAAAATGGGCACCGTGGGGGCCGTGGCGTTGGATTTAGACGGCAATTTGGCGGCAGCCACGTCCACAGGCGGAATGACCAATAAATTACCCGGACGAGTTGGCGATAGTCCCTTAGTGGGTGCCGGATGCTACGCCAATAACGCCAGTGTGGCGGTTTCTTGTACCGGCACGGGCGAAGTCTTCATCCGCGCGCTGGCGGCATATGACATCGCCGCGTTAATGGATTACGGCGGATTAAGTCTCGCGGAAGCCTGCGAGCGGGTAGTAATGGAAAAACTCCCTGCGCTTGGCGGTAGCGGTGGCTTAATCGCTATCGACCATGAAGGGAATGTCGCGCTACCGTTTAACACCGAAGGAATGTATCGCGCCTGGGGCTACGCAGGCGATACGCCAACCACCGGTATCTACCGTGAAAAAGGGGACACCGTTGCCACACAGTGA", - "dna_sequence_length": 966, - "functions": [ - "Isoaspartyl peptidase" - ], - "id": "CDS_810", - "location": [ - [ - "NC_000913", - 866568, - "+", - 966 - ] - ], - "md5": "b39584270cc7038a3a4d3485b8918904", - "parent_gene": "", - "protein_md5": "c67a29edefdc542bc4580ef88e2e7f92", - "protein_translation": "MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSHLRNPVLAARLVMEQSPHVMMIGEGAENFAFARGMERVSPEIFSTSLRYEQLLAARKEGATVLDHSGAPLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGGLIAIDHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREKGDTVATQ", - "protein_translation_length": 321, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945457" - ], - [ - "gene_synonym", - "yliA" - ], - [ - "gene_synonym", - "b0829" - ], - [ - "gene_synonym", - "ECK0819" - ], - [ - "gene_synonym", - "GI:145698235" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75796" - ], - [ - "gene_synonym", - "NP_415350.2" - ], - [ - "gene_synonym", - "EcoGene:EG13472" - ], - [ - "gene_synonym", - "gsiA" - ], - [ - "gene_synonym", - "JW5897" - ], - [ - "gene_synonym", - "ASAP:ABE-0002830" - ] - ], - "dna_sequence": "TTGCCACACAGTGATGAACTTGATGCCGGTAATGTGCTGGCGGTTGAAAATCTGAATATTGCCTTTATGCAGGACCAGCAGAAAATAGCTGCGGTCCGCAATCTCTCTTTTAGTCTGCAACGCGGTGAGACGCTGGCAATTGTTGGCGAATCCGGCTCCGGTAAGTCAGTGACTGCGTTGGCATTGATGCGCCTGTTGGAACAGGCGGGCGGTTTAGTACAGTGCGATAAAATGCTGTTGCAGCGGCGCAGTCGCGAAGTGATTGAACTTAGCGAGCAGAACGCTGCACAAATGCGCCATGTTCGCGGTGCGGATATGGCGATGATATTTCAGGAGCCGATGACATCGCTGAACCCGGTATTTACTGTGGGTGAACAGATTGCCGAATCAATTCGTCTGCATCAGAACGCCAGTCGTGAAGAAGCGATGGTCGAGGCGAAGCGGATGCTGGATCAGGTACGCATTCCTGAGGCACAAACCATTCTTTCACGTTATCCGCATCAACTCTCTGGCGGGATGCGCCAGCGAGTGATGATTGCGATGGCGCTGTCATGCCGCCCGGCGGTGCTGATTGCCGATGAGCCAACCACCGCGCTGGATGTCACTATTCAGGCGCAGATCCTGCAATTAATCAAAGTATTGCAAAAAGAGATGTCGATGGGCGTTATCTTTATCACTCACGATATGGGCGTGGTGGCAGAGATTGCCGATCGGGTACTGGTGATGTATCAGGGCGAGGCGGTGGAAACGGGTACCGTCGAACAGATTTTTCATGCACCGCAACATCCTTACACCCGTGCGCTGTTAGCTGCTGTTCCGCAACTTGGTGCGATGAAAGGGTTAGATTATCCCCGACGTTTCCCGTTGATATCGCTTGAACATCCAGCGAAACAGGCCCCCCCCATCGAGCAGAAAACGGTGGTGGATGGCGAACCTGTTTTACGAGTGCGTAATCTTGTCACCCGTTTCCCTTTGCGCAGCGGTTTGTTGAATCGCGTAACGCGGGAAGTGCATGCCGTTGAGAAAGTCAGTTTTGATCTCTGGCCTGGCGAAACGCTATCGCTGGTGGGCGAGTCTGGCAGCGGTAAATCCACTACCGGGCGGGCGTTGCTGCGCCTGGTCGAATCGCAGGGCGGCGAAATTATCTTTAACGGTCAGCGAATCGATACCTTGTCACCCGGCAAACTTCAGGCATTACGCCGGGATATTCAGTTTATTTTTCAGGACCCTTACGCTTCGCTGGACCCACGTCAGACCATCGGTGATTCGATTATCGAACCGCTGCGTGTACACGGTTTATTGCCAGGTAAAGACGCGGCTGCACGCGTTGCGTGGTTGCTGGAGCGCGTGGGCCTGTTACCTGAACATGCCTGGCGTTACCCGCATGAGTTTTCCGGCGGTCAGCGCCAGCGCATCTGCATTGCTCGCGCGTTGGCATTGAATCCAAAAGTGATCATTGCCGACGAAGCCGTTTCGGCGCTGGATGTTTCTATTCGCGGGCAGATTATCAACTTGTTGCTCGATCTCCAGCGTGATTTCGGCATTGCGTATCTGTTTATCTCCCACGATATGGCGGTGGTAGAGCGGATTAGTCATCGTGTGGCGGTGATGTATCTCGGGCAAATTGTTGAAATTGGTCCACGGCGCGCGGTCTTCGAAAACCCGCAGCATCCTTATACGCGTAAATTACTGGCGGCAGTTCCGGTCGCTGAACCGTCCCGACAACGACCGCAGCGTGTACTGCTGTCGGACGATCTTCCCAGCAATATTCATCTGCGTGGCGAAGAGGTGGCAGCCGTCTCGTTGCAATGCGTCGGGCCGGGGCATTACGTCGCACAACCACAATCAGAATACGCATTCATGCGTAGATAA", - "dna_sequence_length": 1872, - "functions": [ - "glutathione ABC transporter ATPase" - ], - "id": "CDS_811", - "location": [ - [ - "NC_000913", - 867520, - "+", - 1872 - ] - ], - "md5": "60107da24a884b3c834c23f4d6f7896f", - "parent_gene": "", - "protein_md5": "1ba77bd28c886a8e51c93fb31eeba44b", - "protein_translation": "MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQNAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQAPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKDAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR", - "protein_translation_length": 623, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0830" - ], - [ - "gene_synonym", - "GeneID:945459" - ], - [ - "gene_synonym", - "ECK0820" - ], - [ - "gene_synonym", - "gsiB" - ], - [ - "gene_synonym", - "GI:16128798" - ], - [ - "gene_synonym", - "NP_415351.1" - ], - [ - "gene_synonym", - "yliB" - ], - [ - "gene_synonym", - "EcoGene:EG13473" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75797" - ], - [ - "gene_synonym", - "JW5111" - ], - [ - "gene_synonym", - "ASAP:ABE-0002832" - ] - ], - "dna_sequence": "ATGGCAAGAGCTGTACACCGTAGTGGGTTAGTGGCGCTGGGCATTGCGACAGCGTTGATGGCATCTTGTGCATTCGCTGCCAAAGATGTGGTGGTGGCGGTAGGATCGAATTTCACCACGCTCGATCCGTATGACGCAAATGACACGTTATCTCAGGCCGTAGCGAAATCGTTTTACCAGGGGCTGTTCGGTCTGGATAAAGAGATGAAACTGAAAAACGTGCTGGCGGAGAGTTATACCGTTTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATTCCAGGATGGCACCGATTTCAACGCCGCGGCGGTGAAAGCGAATCTGGACCGGGCCAGCGATCCGGCGAATCATCTTAAACGCTATAACCTGTATAAGAATATTGCTAAAACGGAAGCGATCGATCCGACAACGGTAAAGATTACCCTCAAACAGCCGTTCTCAGCGTTTATTAATATTCTTGCCCATCCGGCGACCGCGATGATTTCACCGGCAGCGCTGGAAAAATATGGCAAGGAGATTGGTTTTTATCCGGTGGGAACCGGACCGTATGAACTGGATACCTGGAATCAGACCGATTTTGTGAAGGTGAAAAAATTCGCGGGTTACTGGCAGCCAGGATTGCCCAAACTGGACAGCATAACCTGGCGTCCGGTGGCGGATAACAACACCCGCGCGGCAATGCTGCAAACCGGTGAAGCGCAGTTTGCTTTCCCCATTCCTTACGAGCAGGCCACACTGCTGGAGAAAAACAAAAATATCGAGTTGATGGCCAGTCCGTCAATTATGCAGCGTTATATCAGTATGAACGTGACGCAAAAGCCGTTCGATAACCCGAAGGTCCGTGAGGCGCTGAATTACGCCATTAACCGTCCGGCGCTGGTGAAAGTTGCCTTTGCGGGCTATGCAACGCCAGCTACTGGTGTGGTACCGCCAAGTATCGCCTACGCGCAAAGTTATAAACCGTGGCCTTACGATCCAGTGAAAGCGCGCGAATTACTGAAAGAGGCGGGATATCCCAACGGTTTCAGTACCACGCTGTGGTCGTCACATAACCACAGCACCGCGCAGAAAGTGCTGCAATTTACCCAGCAGCAGTTAGCGCAGGTCGGGATTAAAGCCCAGGTGACTGCGATGGATGCCGGACAGCGGGCGGCAGAAGTTGAAGGTAAAGGGCAAAAAGAGAGCGGCGTGCGGATGTTCTACACTGGCTGGTCGGCTTCAACCGGCGAAGCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCACACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAA", - "dna_sequence_length": 1539, - "functions": [ - "glutathione ABC transporter periplasmic binding protein" - ], - "id": "CDS_812", - "location": [ - [ - "NC_000913", - 869411, - "+", - 1539 - ] - ], - "md5": "98574d6028c3baf630881a35d9e99c30", - "parent_gene": "", - "protein_md5": "15e6565cfd76f124386d3ae2744c50dd", - "protein_translation": "MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGTDFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAMISPAALEKYGKEIGFYPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAAMLQTGEAQFAFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVTQKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEVEGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFEDADLQ", - "protein_translation_length": 512, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75798" - ], - [ - "gene_synonym", - "b0831" - ], - [ - "gene_synonym", - "GeneID:945460" - ], - [ - "gene_synonym", - "ECK0821" - ], - [ - "gene_synonym", - "GI:16128799" - ], - [ - "gene_synonym", - "yliC" - ], - [ - "gene_synonym", - "EcoGene:EG13474" - ], - [ - "gene_synonym", - "gsiC" - ], - [ - "gene_synonym", - "NP_415352.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002834" - ], - [ - "gene_synonym", - "JW0815" - ] - ], - "dna_sequence": "ATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGAACTGGTGCGTCAGCAGCTGGGGTTGGATCAGCCGCTGTATCACCAGTTCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGACTCCGTAGAAATGCGTGATTACCCGGTGATTCAGGCGGAAATTCTGCTTTTCTCGCTGGAATTTATTCTTATCAACTTAGTGGTGGATGTGCTTTACGCCGCCATTAACCCGGCTATCAGGTACAAGTAA", - "dna_sequence_length": 921, - "functions": [ - "glutathione ABC transporter permease" - ], - "id": "CDS_813", - "location": [ - [ - "NC_000913", - 870967, - "+", - 921 - ] - ], - "md5": "d65f0b0a9a03744b71dcc28ebf60d53d", - "parent_gene": "", - "protein_md5": "c46426c216e7cf06b47dab106a168a78", - "protein_translation": "MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEADAQVIELVRQQLGLDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLTITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELGWLPTVGADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLFSLEFILINLVVDVLYAAINPAIRYK", - "protein_translation_length": 306, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0832" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75799" - ], - [ - "gene_synonym", - "GI:16128800" - ], - [ - "gene_synonym", - "ECK0822" - ], - [ - "gene_synonym", - "GeneID:945461" - ], - [ - "gene_synonym", - "gsiD" - ], - [ - "gene_synonym", - "yliD" - ], - [ - "gene_synonym", - "EcoGene:EG13475" - ], - [ - "gene_synonym", - "ASAP:ABE-0002836" - ], - [ - "gene_synonym", - "NP_415353.1" - ], - [ - "gene_synonym", - "JW0816" - ] - ], - "dna_sequence": "ATGCGACTATTTAACTGGCGACGTCAGGCGGTGTTAAACGCCATGCCACTGGTCAAACCTGACCAGGTACGTACACCGTGGCATGAATTCTGGCGACGATTTCGCCGTCAGCATATGGCGATGACCGCCGCATTATTCGTTATTTTATTGATTGTGGTGGCCATTTTTGCACGCTGGATCGCTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTGCGGCGATCGGGACGTTGCTGGGCTTGCTCGCTGGATATTATGAAGGCTGGTGGGATCGGCTGATCATGCGCATTTGCGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGTTTTTCACCATGCGCATTGGTACCTCGATTATCTCTGCCGCCAGCCTCTCATTTCTCGGCCTCGGTGCGCAGCCGCCGACACCAGAGTGGGGAGCAATGCTCAATGAGGCTCGAGCGGATATGGTTATCGCGCCGCATGTCGCTGTTTTTCCGGCCCTGGCTATTTTTCTGACCGTACTGGCGTTCAATTTGTTGGGCGATGGTTTACGCGATGCGCTGGATCCGAAAATTAAAGGATAG", - "dna_sequence_length": 912, - "functions": [ - "glutathione ABC transporter permease" - ], - "id": "CDS_814", - "location": [ - [ - "NC_000913", - 871890, - "+", - 912 - ] - ], - "md5": "dac970ee889cbc3ec52c07cc8361c711", - "parent_gene": "", - "protein_md5": "235a1842601e3ba0e8f9ca8893f2ddbe", - "protein_translation": "MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAALFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVLGSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTVLLRHILPGTVSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPALAIFLTVLAFNLLGDGLRDALDPKIKG", - "protein_translation_length": 303, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0833" - ], - [ - "gene_synonym", - "GI:16128801" - ], - [ - "gene_synonym", - "EcoGene:EG13476" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75800" - ], - [ - "gene_synonym", - "ECK0823" - ], - [ - "gene_synonym", - "GeneID:945462" - ], - [ - "gene_synonym", - "NP_415354.1" - ], - [ - "gene_synonym", - "yliE" - ], - [ - "gene_synonym", - "ASAP:ABE-0002839" - ], - [ - "gene_synonym", - "JW0817" - ] - ], - "dna_sequence": "ATGCTGAGTTTATACGAAAAGATAAAGATAAGGCTGATAATTTTATTTTTATTGGCAGCACTGTCATTTATTGGTCTTTTTTTCATCATTAACTATCAACTGGTATCGGAGCGCGCGGTAAAACGTGCCGATAGCCGCTTTGAACTTATTCAGAAAAACGTTGGCTATTTCTTTAAAGATATTGAACGTTCGGCCCTGACATTAAAGGACTCACTGTATTTATTAAAAAATACAGAGGAGATTCAACGCGCCGTGATTCTTAAAATGGAAATGATGCCATTTTTAGACTCGGTGGGACTGGTACTTGATGATAATAAATATTATCTTTTTTCGCGGAGGGCGAATGATAAAATCGTTGTTTATCATCAGGAACAAGTAAATGGACCGCTTGTCGACGAGTCAGGGCGGGTTATTTTTGCCGATTTTAACCCATCGAAACGACCGTGGTCGGTGGCTTCAGATGACTCTAACAACAGCTGGAATCCGGCATACAATTGCTTTGATCGTCCGGGTAAAAAATGTATCTCTTTTACGCTACACATCAACGGCAAAGATCACGATTTGTTAGCGGTGGATAAAATTCATGTCGATTTAAACTGGCGATATCTGAACGAGTATCTTGATCAAATCAGCGCTAATGATGAAGTTCTATTTTTGAAACAAGGCCATGAGATCATTGCCAAGAATCAACTCGCTCGTGAAAAACTGATTATTTATAATAGCGAAGGTAATTATAATATTATTGATTCTGTCGATACTGAATATATCGAAAAAACATCAGCGGTGCCAAACAACGCATTATTCGAAATCTATTTTTATTATCCTGGCGGTAATTTATTGAACGCATCAGATAAACTTTTTTATCTGCCGTTTGCGTTCATTATTATCGTATTGCTGGTGGTTTATTTAATGACCACTCGTGTGTTCCGTCGGCAATTTTCTGAAATGACAGAGCTGGTTAATACGCTGGCGTTTTTGCCTGACTCAACGGATCAAATCGAGGCTCTGAAAATTCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGCTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGGATCATCAAACTGTGTGGTCTGGAAGCCGTGGAAGCGGTGTTTGGTGTTGATGAGCGCAATAAAATCGTCAGGAAATTGTGTCAGCGAATTGCCGAGAAATATGCGCAATGCTGCGATATCGTGACATTCAATGCCGATCTCTATTTACTTCTGTGTCGGGAAAATGTACAGACATTTACCCGTAAAATAGCGATGGTAAACGATTTTGACAGCAGCTTTGGCTACCGCAATCTGCGCATCCATAAGTCTGCCATTTGTGAACCTTTGCAGGGGGAAAACGCCTGGAGTTACGCAGAAAAACTGAAACTGGCGATTTCCAGTATCCGTGACCATATGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATCGTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCGGGTTTATCAATGAGCTGGGTTATCAGATTATTAAAACGGCAATGGGTGAATTCAGACATTTTAGTCAGCGTGCGTCGCTGAAGGATGATTTCTTACTGCATATTAATGTTTCGCCCTGGCAGTTAAACGAACCACACTTTCATGAGCGTTTTACCACCATCATGAAAGAAAATGGCCTGAAGGCGAACAGCCTCTGTGTTGAGATCACTGAAACCGTGATCGAGCGAATTAATGAACATTTTTATCTCAATATTGAACAACTGCGTAAACAAGGGGTACGGATATCGATTGATGACTTTGGCACCGGTTTGTCAAACCTGAAACGTTTTTATGAAATTAATCCAGACAGCATAAAGGTGGACTCGCAATTCACCGGCGATATTTTCGGTACTGCGGGAAAAATTGTGCGCATTATTTTCGACCTGGCACGCTATAACCGGATCCCGGTGATTGCGGAAGGCGTAGAGAGCGAAGACGTTGCGCGCGAATTAATCAAATTAGGATGTGTTCAGGCTCAGGGGTATCTGTACCAGAAACCCATGCCATTCTCCGCCTGGGATAAAAGTGGAAAATTAGTAAAAGAGTAG", - "dna_sequence_length": 2349, - "functions": [ - "putative membrane-anchored cyclic-di-GMP phosphodiesterase" - ], - "id": "CDS_815", - "location": [ - [ - "NC_000913", - 872979, - "+", - 2349 - ] - ], - "md5": "00e2c8de7d0fa4f6051c9cf6ae3fd025", - "parent_gene": "", - "protein_md5": "7459e01a0804156fd16dc4fece0d625a", - "protein_translation": "MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKDIERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE", - "protein_translation_length": 782, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75801" - ], - [ - "gene_synonym", - "NP_415355.1" - ], - [ - "gene_synonym", - "b0834" - ], - [ - "gene_synonym", - "GI:16128802" - ], - [ - "gene_synonym", - "GeneID:945463" - ], - [ - "gene_synonym", - "EcoGene:EG13477" - ], - [ - "gene_synonym", - "ECK0824" - ], - [ - "gene_synonym", - "JW0818" - ], - [ - "gene_synonym", - "yliF" - ], - [ - "gene_synonym", - "ASAP:ABE-0002841" - ] - ], - "dna_sequence": "ATGTCCAGAATCAATAAGTTCGTACTTACAGTCAGTCTGCTGATTTTTATCATGATTTCAGCAGTTGCCTGCGGGATCTACACTCAAATGGTAAAGGAACGGGTGTATAGCCTGAAACAGTCCGTTATTGATACTGCTTTTGCGGTGGCAAATATTGCTGAATATCGGCGTAGCGTGGCAATTGATCTTATCAACACGCTAAATCCCACGGAGGAACAGCTGTTGGTTGGTTTGCGCACAGCTTACGCCGACTCGGTTTCCCCCTCTTATTTGTACGATGTCGGTCCTTATCTGATTTCCAGTGACGAATGTATTCAGGTAAAGGAGTTCGAGAAAAATTATTGTGCAGATATTATGCAGGTTGTGAAGTATCGACATGTCAAAAATACAGGGTTTATCTCTTTTGACGGTAAAACCTTCGTCTATTACCTCTATCCGGTAACTCACAATCGTAGTCTGATATTTTTGCTTGGTCTGGAGCGTTTTTCTTTACTGTCAAAATCGCTGGCGATGGACAGCGAGAACCTGATGTTCTCTCTATTTAAGAACGGTAAACCGGTGACCGGTGATGAATATAATGCTAAAAACGCCATCTTCACCGTTTCGGAAGCGATGGAGCACTTCGCCTATTTGCCGACCGGATTGTATGTATTTGCGTATAAAAAAGATGTTTATTTGCGGGTTTGTACATTGATTATTTTCTTTGCCGCATTGGTGGCAGTGATATCGGGTGCCAGTTGCCTCTATCTGGTACGCAGAGTGATTAATCGTGGTATTGTGGAGAAAGAAGCCATCATTAATAACCATTTTGAACGCGTACTGGATGGCGGGCTTTTCTTTTCGGCTGCCGATGTCAAAAAACTCTACAGTATGTATAACTCGGCGTTCCTGGACGACCTGACCAAAGCAATGGGCAGAAAATCCTTTGACGAAGATTTAAAAGCGCTGCCGGAAAAAGGCGGTTATTTGTGCCTGTTTGACGTCGATAAATTCAAAAACATTAACGACACCTTCGGTCATTTGCTGGGCGATGAAGTGTTGATGAAAGTGGTGAAAATCCTTAAATCACAGATCCCGGTAGATAAAGGTAAAGTCTACCGCTTCGGCGGTGACGAATTTGCGGTGATTTATACGGGTGGAACGCTGGAAGAGTTGCTATCGATTCTAAAAGAAATCGTTCATTTCCAGGTGGGAAGCATTAATTTAAGTACCAGTATCGGTGTAGCACATTCAAATGAATGTCCTACCGTCGAACGCTTGAAAATGCTGGCGGATGAGCGGCTGTATAAGAGTAAGAAAAACGGCAGGGCACAGATTAGCTGGCAGTAA", 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- "gene_synonym", - "GeneID:945465" - ], - [ - "gene_synonym", - "ECK0825" - ], - [ - "gene_synonym", - "JW0819" - ], - [ - "gene_synonym", - "ASAP:ABE-0002843" - ], - [ - "gene_synonym", - "yliG" - ], - [ - "gene_synonym", - "EcoGene:EG13478" - ], - [ - "gene_synonym", - "rimO" - ], - [ - "gene_synonym", - "NP_415356.1" - ] - ], - "dna_sequence": "ATGAGCAAAGTAACTCCCCAGCCGAAAATCGGCTTTGTTTCCCTTGGCTGTCCGAAAAACCTTGTTGATTCAGAGCGTATTCTCACCGAACTCCGCACTGAAGGTTATGACGTGGTACCGAGCTATGACGATGCGGACATGGTGATCGTCAACACCTGCGGCTTTATTGACAGCGCGGTACAAGAATCACTGGAAGCCATTGGTGAAGCGTTGAATGAAAACGGCAAGGTTATTGTGACCGGTTGTCTGGGGGCAAAAGAAGATCAGATCCGCGAAGTCCACCCGAAAGTGCTGGAAATCACCGGGCCTCATAGCTATGAGCAGGTTCTGGAGCACGTTCATCACTACGTGCCAAAACCGAAACACAACCCATTCCTGAGCCTGGTGCCAGAACAAGGTGTGAAACTGACGCCGCGTCATTATGCCTATCTGAAAATTTCTGAAGGCTGTAATCACCGCTGCACCTTCTGCATTATTCCGTCTATGCGCGGCGACCTGGTGAGCCGTCCGATTGGCGAAGTGTTAAGTGAAGCGAAACGTCTGGTAGATGCGGGCGTTAAAGAGATTCTGGTGATCTCGCAGGATACTTCCGCCTATGGCGTTGATGTTAAACATCGTACTGGCTTCCACAACGGCGAGCCGGTAAAAACCAGCATGGTCAGCCTGTGCGAACAGTTATCGAAACTGGGGATCTGGACACGTCTGCACTACGTTTACCCTTATCCGCATGTGGACGACGTCATCCCACTGATGGCAGAAGGCAAAATCCTGCCGTATCTGGACATTCCGTTGCAGCACGCCAGCCCGCGCATTCTCAAACTGATGAAGCGTCCGGGTTCTGTAGATCGCCAACTGGCGCGCATCAAACAGTGGCGCGAAATCTGCCCGGAACTGACCCTACGCTCAACCTTTATTGTCGGCTTCCCTGGCGAGACAGAAGAAGATTTCCAGATGCTACTCGACTTCCTGAAAGAAGCGCGTCTGGATCGCGTTGGCTGCTTTAAATACAGCCCGGTTGAAGGTGCAGACGCCAATGCCCTGCCTGACCAGGTTCCGGAAGAAGTTAAAGAAGAACGCTGGAACCGTTTCATGCAGCTGCAGCAGCAGATTTCCGCCGAGCGCCTGCAAGAGAAAGTGGGCCGTGAAATTCTGGTGATTATCGACGAAGTGGACGAAGAAGGCGCGATTGGTCGCAGCATGGCAGATGCACCGGAAATCGACGGCGCGGTTTATCTCAATGGTGAAACCAACGTTAAGCCGGGTGATATCCTGCGTGTGAAAGTCGAGCACGCCGATGAGTACGATTTGTGGGGTAGCCGGGTTTAA", 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"gene_synonym", - "ECK0826" - ], - [ - "gene_synonym", - "GeneID:945466" - ], - [ - "gene_synonym", - "NP_415357.1" - ], - [ - "gene_synonym", - "bssR" - ], - [ - "gene_synonym", - "yliH" - ], - [ - "gene_synonym", - "EcoGene:EG13479" - ], - [ - "gene_synonym", - "JW0820" - ], - [ - "gene_synonym", - "ASAP:ABE-0002849" - ] - ], - "dna_sequence": "ATGTTCGTTGACAGACAGCGAATCGATCTGCTGAACCGGTTGATCGACGCACGCGTTGACCTCGCCGCATACGTGCAACTGAGGAAGGCAAAAGGATACATGTCCGTCAGCGAAAGCAATCATCTACGAGATAACTTTTTTAAACTGAATCGCGAACTGCACGATAAATCGCTGCGGTTGAATCTTCATCTGGATCAGGAAGAGTGGAGTGCTCTTCATCATGCTGAAGAAGCATTAGCGACAGCCGCAGTATGTTTGATGAGTGGGCACCATGATTGCCCGACTGTTATTACCGTCAACGCCGATAAGCTTGAAAATTGTCTGATGAGCTTAACGCTGAGTATCCAGAGCCTGCAGAAGCACGCCATGCTTGAGAAGGCCTGA", - "dna_sequence_length": 384, - "functions": [ - "repressor of biofilm formation by indole transport regulation" - ], - "id": "CDS_818", - "location": [ - [ - "NC_000913", - 878248, - "+", - 384 - ] - ], - "md5": "14c287694d8fa34cf518bce70737aa01", - "parent_gene": "", - "protein_md5": "9dbf9ce8120b14c0c53088d087bd7f43", - "protein_translation": "MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRDNFFKLNRELHDKSLRLNLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNADKLENCLMSLTLSIQSLQKHAMLEKA", - "protein_translation_length": 127, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128805" - ], - [ - "gene_synonym", - "EcoGene:EG13480" - ], - [ - "gene_synonym", - "b0837" - ], - [ - "gene_synonym", - "ECK0827" - ], - [ - "gene_synonym", - "GeneID:945467" - ], - [ - "gene_synonym", - "NP_415358.1" - ], - [ - "gene_synonym", - "yliI" - ], - [ - "gene_synonym", - "ASAP:ABE-0002852" - ], - [ - "gene_synonym", - "JW0821" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75804" - ] - ], - "dna_sequence": "ATGCATCGACAATCCTTTTTCCTTGTGCCCCTTATTTGTCTTTCTTCCGCTCTCTGGGCGGCTCCTGCAACGGTAAATGTCGAAGTACTGCAAGACAAACTCGACCATCCCTGGGCACTGGCCTTTTTACCCGATAATCACGGTATGTTAATCACTCTGCGCGGCGGCGAGTTGCGTCACTGGCAAGCAGGAAAAGGATTATCTGCGCCGCTTTCCGGAGTTCCGGACGTTTGGGCGCACGGGCAGGGCGGCCTGCTGGACGTGGTTTTAGCGCCTGATTTTGCTCAGTCTCGCCGCATCTGGTTAAGTTATTCCGAAGTTGGCGATGATGGCAAAGCCGGAACTGCTGTGGGTTATGGCCGCTTAAGTGATGATCTCTCAAAAGTGACCGACTTCCGCACCGTCTTTCGCCAGATGCCAAAACTGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCGCCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTTATAAAGGAATCCGGTGCGCGCGCCGAGATCTGGTCTTATGGCATTCGTAATCCGCAAGGAATGGCGATGAATCCGTGGAGTAATGCACTGTGGCTGAATGAACATGGCCCGCGCGGTGGTGATGAAATTAATATCCCGCAAAAAGGCAAAAACTACGGCTGGCCGCTGGCAACCTGGGGAATCAACTATTCAGGCTTTAAGATACCGGAAGCGAAAGGGGAGATCGTCGCCGGGACCGAGCAACCTGTTTTTTACTGGAAAGATTCGCCCGCTGTGAGCGGCATGGCCTTCTATAACAGCGATAAATTCCCCCAGTGGCAGCAAAAATTATTTATTGGCGCGCTGAAAGATAAAGATGTCATTGTGATGAGCGTCAACGGCGACAAAGTGACAGAAGATGGCCGTATTTTAACGGACAGAGGGCAGCGAATTCGTGATGTTCGCACTGGACCCGACGGTTATTTATACGTTCTCACCGACGAGTCCAGTGGGGAATTACTTAAAGTTAGCCCACGCAATTAG", 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], - [ - "gene_synonym", - "NP_415359.4" - ], - [ - "gene_synonym", - "gstB" - ], - [ - "gene_synonym", - "GI:90111175" - ], - [ - "gene_synonym", - "yliJ" - ], - [ - "gene_synonym", - "ASAP:ABE-0002855" - ], - [ - "gene_synonym", - "JW0822" - ] - ], - "dna_sequence": "ATGATTACGCTGTGGGGTCGGAATAATTCAACTAACGTAAAAAAAGTATTGCTGACGCTCGAAGAACTGGAACTACCTTATGAGCAAATTCTCGCGGGCCGTGAGTTTGGGATAAATCACGATGCTGATTTTCTGGCGATGAACCCTAACGGGCTGGTGCCGTTGTTGCGTGACGACGAAAGTGATCTCATTCTTTGGGAATCAAACGCCATTGTCCGCTATCTGGCGGCACAGTACGGGCAAAAACGCCTGTGGATCGACTCACCGGCACGTCGTGCGGAAGCGGAAAAATGGATGGACTGGGCAAACCAGACGCTCAGTAATGCTCATCGCGGGATCCTGATGGGATTAGTCAGAACACCACCGGAAGAGCGCGATCAGGCCGCCATTGATGCCAGTTGCAAAGAGTGCGACGCCCTGTTTGCCCTGCTCGATGCGGAACTGGCAAAAGTAAAATGGTTCTCTGGCGACGAGTTTGGTGTGGGCGATATCGCTATCGCACCGTTCATCTACAATTTGTTTAACGTTGGCCTGACCTGGACACCGCGTCCAAATCTGCAACGCTGGTATCAGCAACTCACTGAACGCCCCGCAGTGCGCAAAGTGGTGATGATTCCCGTTAGCTAA", - "dna_sequence_length": 627, - "functions": [ - "glutathione S-transferase" - ], - "id": "CDS_820", - "location": [ - [ - "NC_000913", - 880480, - "-", - 627 - ] - ], - "md5": "9f9a3e4f0b4902697e5b1096251ae4f8", - "parent_gene": "", - "protein_md5": "06492c649ddc5b0e81a734de36500f67", - "protein_translation": "MITLWGRNNSTNVKKVLLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDESDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLVRTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNVGLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS", - "protein_translation_length": 208, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128807" - ], - [ - "gene_synonym", - "ECK0829" - ], - [ - "gene_synonym", - "GeneID:945455" - ], - [ - "gene_synonym", - "EcoGene:EG10203" - ], - [ - "gene_synonym", - "NP_415360.1" - ], - [ - "gene_synonym", - "dacC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08506" - ], - [ - "gene_synonym", - "ASAP:ABE-0002860" - ], - [ - "gene_synonym", - "JW0823" - ], - [ - "gene_synonym", - "b0839" - ] - ], - "dna_sequence": "ATGACGCAATACTCCTCTCTCCTTCGTGGTCTTGCAGCGGGTTCTGCATTTTTATTCCTTTTTGCCCCAACGGCATTCGCGGCGGAACAAACCGTTGAAGCGCCGAGCGTGGATGCGCGTGCATGGATTTTAATGGATTACGCCAGCGGTAAAGTGCTGGCAGAAGGCAATGCGGATGAGAAACTGGATCCCGCGAGCCTGACTAAAATCATGACCAGCTATGTGGTTGGGCAGGCGCTTAAGGCCGATAAGATTAAACTCACCGATATGGTGACGGTCGGTAAAGATGCCTGGGCGACGGGAAATCCGGCACTGCGTGGTTCATCGGTAATGTTCCTCAAACCGGGCGATCAGGTTTCGGTGGCAGACTTGAACAAAGGTGTGATTATCCAGTCCGGTAATGACGCCTGTATTGCGCTGGCTGATTACGTTGCCGGGAGCCAGGAGTCATTTATTGGTCTGATGAATGGTTATGCCAAAAAACTGGGTCTGACCAACACTACCTTCCAGACGGTGCACGGCCTGGATGCGCCGGGGCAGTTCAGCACCGCGCGCGATATGGCATTGCTGGGTAAAGCATTGATCCACGATGTGCCGGAAGAGTACGCCATTCATAAAGAGAAAGAGTTCACCTTCAACAAAATTCGTCAGCCTAACCGTAACCGTCTGCTGTGGAGCAGCAATCTGAATGTTGATGGCATGAAGACAGGAACCACGGCAGGCGCGGGATATAATCTGGTTGCTTCGGCTACCCAGGGCGATATGCGTTTAATCTCCGTAGTGTTGGGGGCGAAAACCGACCGTATCCGTTTTAATGAGTCTGAGAAATTATTGACCTGGGGTTTCCGCTTCTTTGAAACCGTGACGCCAATTAAACCTGATGCCACCTTTGTGACTCAGCGCGTCTGGTTTGGTGATAAGAGCGAAGTGAATCTCGGGGCAGGTGAAGCGGGCTCAGTGACCATACCGCGTGGGCAGCTGAAAAACCTGAAAGCGAGTTATACGTTAACGGAACCGCAGCTTACCGCACCGCTGAAAAAAGGTCAGGTTGTCGGGACCATTGATTTCCAGCTTAACGGTAAATCCATTGAGCAGCGTCCGCTGATCGTGATGGAAAATGTGGAAGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAA", 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- "gene_synonym", - "GI:16128808" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACK5" - ], - [ - "gene_synonym", - "ASAP:ABE-0002862" - ], - [ - "gene_synonym", - "EcoGene:EG10223" - ], - [ - "gene_synonym", - "NP_415361.1" - ], - [ - "gene_synonym", - "JW0824" - ], - [ - "gene_synonym", - "b0840" - ] - ], - "dna_sequence": "ATGGAAACACGTCGCGAAGAGCGTATCGGGCAGCTGCTGCAAGAATTAAAACGCAGCGATAAGTTACATCTTAAAGACGCCGCCGCCCTGCTTGGGGTTTCGGAGATGACGATTCGTCGCGATCTGAACAACCACAGTGCGCCCGTCGTTTTGCTCGGCGGCTATATTGTTCTGGAACCGCGCAGTGCCAGCCATTACCTGTTAAGCGATCAAAAATCCCGCCTGGTGGAAGAAAAACGCCGGGCGGCAAAACTGGCTGCGACGCTGGTAGAACCCGATCAGACCCTCTTTTTTGACTGTGGCACCACCACGCCGTGGATTATTGAAGCGATTGATAATGAAATCCCTTTTACCGCCGTTTGTTATTCGCTAAATACCTTTCTGGCGCTGAAAGAGAAACCCCATTGCCGCGCGTTTCTTTGCGGTGGTGAATTTCACGCCAGCAACGCCATTTTCAAACCCATCGATTTTCAGCAAACGCTGAATAATTTTTGCCCGGATATCGCTTTTTATTCTGCGGCGGGCGTGCATGTCAGTAAAGGCGCTACCTGTTTTAATCTTGAAGAGTTGCCGGTAAAACACTGGGCCATGTCGATGGCGCAAAAGCATGTGCTGGTTGTCGACCACAGTAAATTTGGCAAGGTGCGTCCGGCGCGCATGGGTGACCTGAAACGCTTTGATATTGTGGTGAGCGATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAA", - "dna_sequence_length": 759, - "functions": [ - "deoxyribose-5-phosphate-inducible deoxyribose operon transcriptional repressor", - "repressor of nupG and tsx" - ], - "id": "CDS_822", - "location": [ - [ - "NC_000913", - 882734, - "-", - 759 - ] - ], - "md5": "110e05f6771404759ee78a143e059d48", - "parent_gene": "", - "protein_md5": "8ee9773f9e113ce236aaaf69eec21e0d", - "protein_translation": "METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNNHSAPVVLLGGYIVLEPRSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGTTTPWIIEAIDNEIPFTAVCYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQTLNNFCPDIAFYSAAGVHVSKGATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPARMGDLKRFDIVVSDCCPEDEYVKYAQTQRIKLMY", - "protein_translation_length": 252, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945450" - ], - [ - "gene_synonym", - "bcrC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75806" - ], - [ - "gene_synonym", - "EcoGene:EG13676" - ], - [ - "gene_synonym", - "GI:16128809" - ], - [ - "gene_synonym", - "ECK0831" - ], - [ - "gene_synonym", - "ybjG" - ], - [ - "gene_synonym", - "JW5112" - ], - [ - "gene_synonym", - "ASAP:ABE-0002865" - ], - [ - "gene_synonym", - "NP_415362.1" - ], - [ - "gene_synonym", - "b0841" - ] - ], - "dna_sequence": "ATGCTGGAAAATTTGAATCTCTCTCTATTCTCTCTTATTAACGCGACGCCAGACTCGGCTCCGTGGATGATCTCGTTGGCGATTTTTATTGCTAAAGATTTGATTACCGTGGTGCCGTTGCTGGCCGTGGTACTTTGGTTGTGGGGGCTTACAGCACAACGGCAACTGGTGATAAAAATCGCTATCGCGCTGGCGGTCAGCCTGTTTGTGTCCTGGACGATGGGACATCTTTTTCCGCACGACCGACCCTTTGTCGAAAATATCGGCTATAACTTCCTGCATCATGCGGCGGATGACTCATTCCCAAGCGATCACGGTACGGTGATTTTCACCTTTGCACTGGCATTTTTATGCTGGCATCGCCTGTGGTCCGGCTCACTTTTAATGGTGCTGGCCGTCGTCATTGCCTGGTCGCGCGTTTATCTTGGCGTCCACTGGCCGCTGGATATGCTCGGTGGATTGCTGGCAGGTATGATTGGCTGCCTTAGTGCCCAGATTATCTGGCAAGCGATGGGGCATAAACTCTATCAACGTCTGCAATCGTGGTATCGCGTCTGTTTTGCATTACCGATCCGCAAAGGCTGGGTGCGTGACTGA", - "dna_sequence_length": 597, - "functions": [ - "undecaprenyl pyrophosphate phosphatase" - ], - "id": "CDS_823", - "location": [ - [ - "NC_000913", - 883388, - "-", - 597 - ] - ], - "md5": "7f66fce12955d771323d3385727d93c1", - "parent_gene": "", - "protein_md5": "d94d303f349fd6b56cbd2781dd092aa5", - "protein_translation": "MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAVVLWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFPSDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIGCLSAQIIWQAMGHKLYQRLQSWYRVCFALPIRKGWVRD", - "protein_translation_length": 198, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cmlA" - ], - [ - "gene_synonym", - "EcoGene:EG13696" - ], - [ - "gene_synonym", - "mdfA" - ], - [ - "gene_synonym", - "ECK0832" - ], - [ - "gene_synonym", - "ASAP:ABE-0002871" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEY8" - ], - [ - "gene_synonym", - "GeneID:945448" - ], - [ - "gene_synonym", - "b0842" - ], - [ - "gene_synonym", - "GI:16128810" - ], - [ - "gene_synonym", - "JW0826" - ], - [ - "gene_synonym", - "cmr" - ], - [ - "gene_synonym", - "NP_415363.1" - ] - ], - "dna_sequence": "ATGCAAAATAAATTAGCTTCCGGTGCCAGGCTTGGACGTCAGGCGTTACTTTTCCCTCTCTGTCTGGTGCTTTACGAATTTTCAACCTATATCGGCAACGATATGATTCAACCCGGTATGTTGGCCGTGGTGGAACAATATCAGGCGGGCATTGATTGGGTTCCTACTTCGATGACCGCGTATCTGGCGGGCGGGATGTTTTTACAATGGCTGCTGGGGCCGCTGTCGGATCGTATTGGTCGCCGTCCGGTGATGCTGGCGGGAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACTGTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATTACCGGCGAGCAGTTGAGCAGCTATGAATATGGCTTGCTGCAAGTGCCTATTTTCGGGGCGTTAATTGCGGGTAACTTGCTGTTAGCGCGTCTGACCTCGCGCCGCACCGTACGTTCGCTGATTATTATGGGCGGCTGGCCGATTATGATTGGTCTATTGGTCGCTGCTGCGGCAACGGTTATCTCATCGCACGCGTATTTATGGATGACTGCCGGGTTAAGTATTTATGCTTTCGGTATTGGTCTGGCGAATGCGGGACTGGTGCGATTAACCCTGTTTGCCAGCGATATGAGTAAAGGTACGGTTTCTGCCGCGATGGGAATGCTGCAAATGCTGATCTTTACCGTTGGTATTGAAATCAGCAAACATGCCTGGCTGAACGGGGGCAACGGACTGTTTAATCTCTTCAACCTTGTCAACGGAATTTTGTGGCTGTCGCTGATGGTTATCTTTTTAAAAGATAAACAGATGGGAAATTCTCACGAAGGGTAA", 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- [ - "gene_synonym", - "ASAP:ABE-0002873" - ], - [ - "gene_synonym", - "NP_415364.1" - ], - [ - "gene_synonym", - "b0843" - ], - [ - "gene_synonym", - "JW0827" - ], - [ - "gene_synonym", - "GI:16128811" - ], - [ - "gene_synonym", - "ybjH" - ] - ], - "dna_sequence": "ATGATTATGAAAAATTGTCTACTGTTGGGCGCGCTTTTAATGGGCTTTACTGGTGTGGCGATGGCGCAAAGTGTCACCGTCGATGTGCCGAGTGGATACAAAGTGGTTGTGGTTCCTGATTCAGTCAGCGTTCCACAAGCGGTCAGCGTCGCGACTGTGCCGCAAACCGTCTATGTGGCTCCTGCGCCAGCTCCGGCTTACCGCCCGCATCCTTATGTTCGCCATCTTGCCAGCGTAGGTGAAGGGATGGTTATCGAACACCAGATTGACGACCATCACCATTAA", - "dna_sequence_length": 285, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_825", - "location": [ - [ - "NC_000913", - 885230, - "-", - 285 - ] - ], - "md5": "90f114c6d784a661e30626f4bfbcca9f", - "parent_gene": "", - "protein_md5": "710dc7667432efcbee50c4dcd77dc506", - "protein_translation": "MIMKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSVPQAVSVATVPQTVYVAPAPAPAYRPHPYVRHLASVGEGMVIEHQIDDHHH", - "protein_translation_length": 94, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13678" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75809" - ], - [ - "gene_synonym", - "ECK0834" - ], - [ - "gene_synonym", - "GeneID:945470" - ], - [ - "gene_synonym", - "ASAP:ABE-0002877" - ], - [ - "gene_synonym", - "GI:90111176" - ], - [ - "gene_synonym", - "NP_415365.4" - ], - [ - "gene_synonym", - "b0844" - ], - [ - "gene_synonym", - "ybjI" - ], - [ - "gene_synonym", - "JW5113" - ] - ], - "dna_sequence": "ATGAGCATTAAATTAATTGCGGTAGACATGGATGGTACTTTCTTAAGCGATCAAAAAACCTATAACCGTGAGCGGTTTATGGCTCAGTATCAGCAAATGAAAGCACAAGGAATTCGCTTTGTAGTCGCCAGCGGGAATCAATATTATCAGTTGATCTCTTTCTTCCCTGAAATTGCTAATGAAATTGCCTTTGTGGCTGAAAACGGCGGCTGGGTAGTGAGCGAAGGCAAAGATGTTTTTAATGGCGAGCTATCGAAGGATGCGTTTGCTACTGTCGTGGAACATTTGCTGACGCGCCCGGAAGTGGAAATTATTGCCTGCGGAAAAAATAGTGCCTATACACTCAAAAAATATGACGATGCCATGAAAACGGTGGCGGAAATGTATTATCACCGTCTGGAATACGTCGATAACTTTGACAACTTAGAGGATATCTTCTTTAAGTTTGGCCTGAATCTTTCCGATGAACTGATTCCACAAGTACAAAAAGCATTACATGAGGCCATCGGCGATATTATGGTGTCGGTCCACACCGGCAACGGCAGCATCGATCTGATTATCCCCGGCGTACATAAAGCCAATGGCCTTCGCCAACTGCAGAAATTATGGGGAATAGACGACAGCGAAGTGGTGGTCTTTGGCGATGGCGGTAACGATATTGAGATGCTGCGTCAGGCAGGCTTTAGTTTTGCAATGGAAAATGCCGGTAGCGCGGTCGTCGCAGCGGCAAAATACCGCGCAGGCTCCAATAACCGTGAAGGCGTACTGGATGTGATCGATAAAGTTCTTAAACACGAAGCGCCATTTGACCAATAA", - "dna_sequence_length": 816, - "functions": [ - "5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase", - "pyrimidine phosphatase", - "riboflavin synthesis" - ], - "id": "CDS_826", - "location": [ - [ - "NC_000913", - 886131, - "-", - 816 - ] - ], - "md5": "63b958c9ecaab589979df92142f2606b", - "parent_gene": "", - "protein_md5": "76fd2bc51850ae4283c3cfa8d3828d41", - "protein_translation": "MSIKLIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVASGNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVFNGELSKDAFATVVEHLLTRPEVEIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQVQKALHEAIGDIMVSVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGNDIEMLRQAGFSFAMENAGSAVVAAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ", - "protein_translation_length": 271, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415366.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75810" - ], - [ - "gene_synonym", - "EcoGene:EG13679" - ], - [ - "gene_synonym", - "ECK0835" - ], - [ - "gene_synonym", - "GeneID:945471" - ], - [ - "gene_synonym", - "JW0829" - ], - [ - "gene_synonym", - "GI:16128813" - ], - [ - "gene_synonym", - "ASAP:ABE-0002880" - ], - [ - "gene_synonym", - "ybjJ" - ], - [ - "gene_synonym", - "b0845" - ] - ], - "dna_sequence": "ATGACCGTAAATTCTTCACGTAATGCATTGAAACGCCGAACCTGGGCGCTGTTTATGTTCTTCTTTTTGCCAGGCCTGTTAATGGCGTCCTGGGCAACCCGTACGCCTGCTATCCGCGATATTCTCTCTGTCTCGATCGCTGAAATGGGCGGTGTTCTCTTTGGTCTGTCGATCGGTTCGATGAGCGGTATTCTCTGCTCGGCGTGGTTAGTGAAACGCTTTGGGACACGTAATGTCATCCTGGTCACGATGTCCTGCGCATTGATCGGGATGATGATATTAAGTCTGGCACTCTGGCTGACATCGCCCCTGCTCTTTGCCGTTGGTCTCGGCGTCTTTGGGGCAAGTTTTGGTTCTGCGGAAGTGGCGATAAACGTTGAAGGTGCTGCCGTTGAGCGAGAAATGAATAAGACGGTTTTGCCGATGATGCACGGTTTTTATAGCCTGGGCACGCTGGCAGGCGCAGGTGTCGGGATGGCACTGACGGCCTTTGGCGTTCCGGCAACGGTGCACATTTTATTGGCGGCGCTGGTAGGTATCGCACCTATTTATATCGCCATTCAGGCAATCCCTGACGGTACGGGCAAAAATGCTGCCGATGGCACCCAGCATGGCGAAAAAGGCGTACCTTTTTATCGCGATATCCAGTTGCTGCTGATAGGTGTTGTGGTGCTGGCGATGGCCTTTGCCGAAGGTTCTGCCAACGACTGGTTACCCTTATTAATGGTTGACGGTCACGGTTTTAGCCCTACTTCCGGCTCGCTGATTTATGCCGGTTTTACCCTGGGGATGACCGTTGGACGCTTCACCGGCGGTTGGTTCATCGACCGTTACAGTCGCGTTGCCGTGGTTCGGGCCAGTGCACTAATGGGGGCGTTGGGTATTGGGCTGATTATTTTTGTCGATAGCGCCTGGGTCGCTGGGGTGTCTGTTGTACTCTGGGGACTGGGTGCCTCGCTGGGCTTCCCGCTGACCATTTCTGCCGCCAGCGATACCGGCCCCGATGCACCAACCCGCGTCAGTGTGGTAGCAACGACCGGTTATCTGGCTTTCCTCGTCGGGCCGCCGCTGCTGGGCTATCTCGGCGAACATTATGGATTACGTAGTGCAATGCTGGTTGTACTGGCGCTGGTTATTCTCGCGGCTATTGTCGCGAAAGCCGTCGCCAAACCCGATACCAAAACGCAGACGGCGATGGAGAATAGTTGA", 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], - [ - "gene_synonym", - "ECK0836" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75811" - ], - [ - "gene_synonym", - "JW5114" - ], - [ - "gene_synonym", - "rcdA" - ], - [ - "gene_synonym", - "ybjK" - ], - [ - "gene_synonym", - "b0846" - ], - [ - "gene_synonym", - "GI:16128814" - ], - [ - "gene_synonym", - "ASAP:ABE-0002885" - ] - ], - "dna_sequence": "ATGCGTCGCGCTAACGATCCGCAACGGCGAGAAAAAATTATCCAGGCCACGCTGGAGGCGGTGAAACTTTACGGAATACATGCTGTTACGCACCGCAAAATTGCTACCCTTGCCGGGGTACCGTTGGGATCGATGACCTACTATTTTTCAGGAATTGATGAGTTGTTACTGGAGGCGTTCAGCAGTTTTACTGAGATCATGTCCCGGCAATATCAGGCATTTTTTAGCGATGTTAGTGATGCTCCGGGCGCATGCCAGGCTATCACCGATATGATCTACAGCTCACAGGTTGCAACGCCGGATAACATGGAGCTGATGTACCAGCTCTACGCGCTGGCTAGCCGAAAACCGCTATTAAAAACGGTAATGCAAAACTGGATGCAGCGCAGTCAGCAAACGCTCGAACAATGGTTTGAACCCGGAACCGCCCGCGCGCTTGATGCGTTTATTGAGGGGATGACGCTGCATTTTGTCACCGACCGTAAGCCGCTATCGCGCGAGGAGATTTTGAGGATGGTTGAGAGGGTTGCAGGGTAG", - "dna_sequence_length": 537, - "functions": [ - "transcriptional regulator of csgD and ybiJI", - "autoregulator" - ], - "id": "CDS_828", - "location": [ - [ - "NC_000913", - 887423, - "+", - 537 - ] - ], - "md5": "8cecfbe1bcddd61e67aebfd7cf4ad7ab", - "parent_gene": "", - "protein_md5": "65646c01bd712f5483197e9bb4866a7b", - "protein_translation": "MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGSMTYYFSGIDELLLEAFSSFTEIMSRQYQAFFSDVSDAPGACQAITDMIYSSQVATPDNMELMYQLYALASRKPLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTDRKPLSREEILRMVERVAG", - "protein_translation_length": 178, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415368.1" - ], - [ - "gene_synonym", - "ECK0838" - ], - [ - "gene_synonym", - "EcoGene:EG13681" - ], - [ - "gene_synonym", - "GeneID:945474" - ], - [ - "gene_synonym", - "ASAP:ABE-0002887" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60869" - ], - [ - "gene_synonym", - "ybjL" - ], - [ - "gene_synonym", - "b0847" - ], - [ - "gene_synonym", - "JW0831" - ], - [ - "gene_synonym", - "GI:16128815" - ] - ], - "dna_sequence": "GTGAATATAAACGTCGCCGAATTGTTAAATGGGAATTACATTCTGTTATTATTTGTGGTCCTCGCGCTTGGGCTATGTCTCGGAAAGTTACGACTTGGTTCGATCCAACTGGGTAATTCCATTGGCGTTTTAGTCGTATCGCTGTTATTAGGCCAACAACATTTCAGCATTAACACCGATGCGCTTAATCTTGGCTTTATGCTGTTTATTTTCTGCGTCGGGGTCGAAGCCGGACCGAACTTTTTTTCCATTTTTTTTCGCGATGGGAAAAATTACCTAATGTTAGCACTGGTGATGGTTGGCAGTGCGCTGGTGATCGCCTTAGGGTTAGGTAAGCTGTTTGGCTGGGATATTGGCCTGACGGCCGGTATGTTAGCAGGCTCTATGACGTCGACACCGGTTCTGGTCGGTGCTGGCGATACACTGCGTCATTCCGGCATGGAAAGCAGGCAGCTCTCACTGGCACTGGATAATCTGAGCCTCGGGTATGCCTTAACCTATTTAATCGGTCTGGTGAGTTTGATTGTTGGTGCGCGTTACTTGCCGAAATTGCAGCATCAGGACTTACAGACCAGCGCCCAGCAAATCGCCCGCGAACGTGGCCTGGACACTGATGCCAACCGTAAGGTTTATTTACCGGTGATCCGCGCCTATCGCGTCGGCCCGGAACTGGTGGCCTGGACCGACGGCAAAAATCTGCGTGAACTGGGTATTTATCGACAAACCGGCTGCTACATTGAACGTATTCGACGTAACGGGATTCTGGCAAATCCAGACGGTGATGCCGTGCTACAAATGGGCGATGAAATAGCGTTGGTAGGCTATCCCGACGCCCATGCCCGACTCGATCCCAGCTTCCGTAACGGTAAAGAAGTTTTCGATCGTGACCTTCTCGACATGCGTATCGTCACTGAAGAAGTGGTCGTTAAAAACCATAACGCTGTAGGTAAACGTCTCGCACAACTGAAGTTGACCGATCACGGTTGCTTCCTTAACCGCGTCATTCGTAGCCAGATTGAGATGCCGATAGATGACAACGTCGTGCTTAACAAAGGTGACGTTTTACAAGTCAGCGGCGATGCCCGCCGCGTAAAAACCATCGCCGATCGCATCGGCTTTATCTCGATTCACAGCCAGGTCACTGACCTGCTGGCATTCTGCGCCTTCTTTGTTATTGGGCTGATGATCGGGATGATCACCTTCCAGTTCAGCACATTCAGTTTCGGCATGGGGAACGCTGCCGGGTTGTTATTCGCCGGAATTATGCTGGGCTTTATGCGTGCTAACCACCCGACCTTCGGTTACATTCCGCAGGGTGCATTAAGCATGGTGAAAGAGTTCGGCTTGATGGTGTTTATGGCAGGCGTTGGTCTGAGCGCCGGTAGCGGTATTAATAACGGCCTGGGCGCGATTGGCGGTCAGATGTTGATTGCCGGATTGATTGTCAGTCTGGTGCCCGTGGTTATCTGTTTCTTGTTCGGTGCTTATGTATTGCGAATGAACCGCGCGCTGTTGTTCGGCGCAATGATGGGCGCACGTACCTGCGCGCCGGCAATGGAGATCATCAGTGATACAGCTCGCAGTAACATCCCGGCGCTGGGCTATGCGGGCACCTATGCAATCGCCAACGTCCTGCTGACGCTGGCAGGGACAATCATCGTCATGGTATGGCCAGGATTAGGATAA", 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[ - "gene_synonym", - "ECK0839" - ], - [ - "gene_synonym", - "ASAP:ABE-0002891" - ], - [ - "gene_synonym", - "GI:16128816" - ], - [ - "gene_synonym", - "GeneID:945477" - ], - [ - "gene_synonym", - "NP_415369.1" - ], - [ - "gene_synonym", - "b0848" - ], - [ - "gene_synonym", - "ybjM" - ], - [ - "gene_synonym", - "JW0832" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64439" - ] - ], - "dna_sequence": "GTGAAACATAAACAACGTTGGGCGGGGGCAATCTGCTGTTTTGTCCTCTTCATTGTGGTGTGCCTTTTTCTGGCGACGCACATGAAAGGCGCTTTTCGGGCTGCCGGGCATCCTGAAATCGGCTTGCTATTTTTCATTCTTCCTGGAGCAGTCGCCAGCTTCTTTTCACAGCGTAGAGAAGTCCTGAAACCTCTGTTTGGCGCAATGCTGGCGGCACCCTGTTCGATGCTCATTATGCGGCTGTTTTTTTCACCGACGCGCTCATTCTGGCAAGAGCTGGCATGGTTACTAAGCGCGGTGTTCTGGTGTGCGCTGGGGGCACTGTGTTTCTTATTTATCAGTAGTTTGTTTAAACCACAGCACAGAAAAAATCAGTAA", - "dna_sequence_length": 378, - "functions": [ - "inner membrane protein" - ], - "id": "CDS_830", - "location": [ - [ - "NC_000913", - 890089, - "+", - 378 - ] - ], - "md5": "a97f6298c766cadbd421070522ae4735", - "parent_gene": "", - "protein_md5": "ee21883bafe1692f3d9e922bf7d90f3e", - "protein_translation": "MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLFFILPGAVASFFSQRREVLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFWCALGALCFLFISSLFKPQHRKNQ", - "protein_translation_length": 125, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415370.1" - ], - [ - "gene_synonym", - "grxA" - ], - [ - "gene_synonym", - "GeneID:945479" - ], - [ - "gene_synonym", - "grx" - ], - [ - "gene_synonym", - "GI:16128817" - ], - [ - "gene_synonym", - "b0849" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68688" - ], - [ - "gene_synonym", - "EcoGene:EG10417" - ], - [ - "gene_synonym", - "ECK0840" - ], - [ - "gene_synonym", - "JW0833" - ], - [ - "gene_synonym", - "ASAP:ABE-0002893" - ] - ], - "dna_sequence": "ATGCAAACCGTTATTTTTGGTCGTTCGGGTTGCCCTTACTGTGTGCGTGCAAAAGATCTGGCTGAGAAATTGAGCAATGAACGCGATGATTTTCAGTATCAGTATGTAGATATTCGTGCGGAAGGGATCACTAAAGAAGATCTACAACAAAAGGCAGGTAAACCCGTAGAAACCGTGCCGCAGATTTTTGTCGATCAGCAACATATCGGCGGCTATACCGATTTTGCTGCATGGGTGAAAGAAAATCTGGACGCCTGA", - "dna_sequence_length": 258, - "functions": [ - "glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a)" - ], - "id": "CDS_831", - "location": [ - [ - "NC_000913", - 890753, - "-", - 258 - ] - ], - "md5": "b0b944879e4137d17bab71e43a0a03a0", - "parent_gene": "", - "protein_md5": "ae2b2a4fa755d5685227f4a885f51a20", - "protein_translation": "MQTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFVDQQHIGGYTDFAAWVKENLDA", - "protein_translation_length": 85, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415371.1" - ], - [ - "gene_synonym", - "GeneID:945481" - ], - [ - "gene_synonym", - "GI:16128818" - ], - [ - "gene_synonym", - "ybjC" - ], - [ - "gene_synonym", - "ASAP:ABE-0002898" - ], - [ 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"aliases": [ - [ - "gene_synonym", - "nfsA" - ], - [ - "gene_synonym", - "snrA" - ], - [ - "gene_synonym", - "GI:16128819" - ], - [ - "gene_synonym", - "b0851" - ], - [ - "gene_synonym", - "mda18" - ], - [ - "gene_synonym", - "GeneID:945483" - ], - [ - "gene_synonym", - "ASAP:ABE-0002900" - ], - [ - "gene_synonym", - "NP_415372.1" - ], - [ - "gene_synonym", - "ybjB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17117" - ], - [ - "gene_synonym", - "EcoGene:EG11261" - ], - [ - "gene_synonym", - "JW0835" - ], - [ - "gene_synonym", - "mdaA" - ], - [ - "gene_synonym", - "ECK0842" - ] - ], - "dna_sequence": 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"03bc60d22bbef4fb47c40413718dd28a", - "protein_translation": "MTPTIELICGHRSIRHFTDEPISEAQREAIINSARATSSSSFLQCSSIIRITDKALREELVTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLLLGVVDTAMMAQNALIAAESLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFGLCLGWPADNPDLKPRLPASILVHENSYQPLDKGALAQYDEQLAEYYLTRGSNNRRDTWSDHIRRTIIKESRPFILDYLHKQGWATR", - "protein_translation_length": 240, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128820" - ], - [ - "gene_synonym", - "nek" - ], - [ - "gene_synonym", - "b0852" - ], - [ - "gene_synonym", - "ASAP:ABE-0002903" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C0U4" - ], - [ - "gene_synonym", - "EcoGene:EG10852" - ], - [ - "gene_synonym", - "GeneID:945484" - ], - [ - "gene_synonym", - "NP_415373.1" - ], - [ - "gene_synonym", - "JW0836" - ], - [ - "gene_synonym", - "rimK" - ], - [ - "gene_synonym", - "ECK0843" - ] - ], - "dna_sequence": "GTGAAAATTGCCATATTGTCCCGGGATGGAACGCTCTATTCGTGTAAGCGGCTGCGTGAAGCCGCTATACAGCGCGGTCACCTGGTTGAAATTCTTGATCCGCTTTCTTGCTACATGAACATAAATCCTGCGGCGTCTTCTATTCACTACAAAGGCCGCAAGTTACCCCATTTTGACGCAGTGATCCCGCGTATTGGCACCGCCATTACCTTTTATGGGACGGCGGCACTGCGCCAGTTCGAGATGCTGGGGAGCTATCCGCTCAATGAGTCGGTCGCCATTGCCCGGGCGCGTGACAAATTGCGTTCCATGCAACTGCTGGCGCGTCAGGGCATCGACCTGCCTGTCACGGGCATTGCGCATTCGCCGGATGATACCAGCGATTTAATCGACATGGTCGGTGGTGCGCCGCTGGTGGTCAAGTTGGTTGAAGGCACGCAGGGAATTGGCGTCGTGCTGGCGGAGACGCGTCAGGCGGCGGAAAGCGTGATTGACGCTTTCCGCGGTCTGAACGCGCATATTCTGGTGCAGGAATATATCAAAGAGGCGCAAGGGTGCGATATCCGCTGTCTGGTTGTTGGCGATGAAGTGGTCGCTGCGATTGAACGGCGGGCGAAAGAGGGCGATTTTCGTTCCAATTTGCATCGTGGCGGCGCGGCAAGCGTCGCCAGTATCACACCACAGGAGCGTGAAATCGCGATAAAAGCCGCGCGAACGATGGCGCTGGACGTTGCTGGTGTGGATATTCTGCGTGCTAATCGCGGGCCGTTGGTGATGGAGGTGAATGCGTCGCCGGGGCTGGAAGGAATAGAAAAAACCACCGGTATCGACATCGCGGGTAAAATGATCCGCTGGATCGAACGCCACGCTACGACAGAATATTGCCTGAAAACGGGTGGTTAG", - "dna_sequence_length": 903, - "functions": [ - "ribosomal protein S6 modification protein" 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"ECK0844" - ], - [ - "gene_synonym", - "ybjN" - ] - ], - "dna_sequence": "ATGACATCGCTGGTCGTTCCTGGTCTGGATACGCTGCGTCAATGGCTCGATGACCTGGGGATGAGTTTTTTTGAATGTGATAACTGTCAGGCTCTGCATCTGCCCCATATGCAGAATTTCGACGGTGTCTTTGATGCCAAAATCGATCTGATCGATAACACGATCCTGTTTTCTGCCATGGCGGAAGTCCGACCTTCAGCCGTATTGCCGCTGGCGGCGGATTTATCTGCCATCAATGCCAGTTCGCTGACCGTGAAAGCATTTCTTGATATGCAGGATGATAATCTGCCAAAGCTGGTGGTTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGA", - "dna_sequence_length": 477, - "functions": [ - "negative regulator of motility", - "multicopy suppressor of coaA(Ts)" - ], - "id": "CDS_835", - "location": [ - [ - "NC_000913", - 892957, - "+", - 477 - ] - ], - "md5": "841d20724bd6cc8546c908ee0392356b", - "parent_gene": "", - "protein_md5": "6ce61e826b17c7c70a5e13980790f51c", - "protein_translation": "MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVFDAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVCQSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH", - "protein_translation_length": 158, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0854" - ], - [ - "gene_synonym", - "GI:16128822" - ], - [ - "gene_synonym", - "EcoGene:EG11629" - ], - [ - "gene_synonym", - "GeneID:945480" - ], - [ - "gene_synonym", - "ASAP:ABE-0002913" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31133" - ], - [ - "gene_synonym", - "JW0838" - ], - [ - "gene_synonym", - "ECK0845" - ], - [ - "gene_synonym", - "NP_415375.1" - ], - [ - "gene_synonym", - "potF" - ] - ], - "dna_sequence": "ATGACCGCCTTAAATAAAAAATGGCTATCGGGTCTGGTTGCGGGTGCTCTGATGGCCGTCTCTGTCGGCACGCTCGCGGCTGAACAAAAAACACTCCACATTTATAACTGGTCTGATTATATCGCCCCGGACACGGTGGCCAATTTTGAAAAAGAAACCGGTATTAAAGTCGTCTACGATGTTTTCGACTCTAACGAAGTACTGGAAGGCAAATTAATGGCCGGGAGTACCGGCTTTGATCTGGTGGTTCCATCTGCCAGCTTTCTGGAGCGCCAGTTGACTGCGGGAGTTTTCCAGCCGCTGGACAAAAGCAAATTGCCGGAGTGGAAGAATCTCGACCCGGAACTGCTGAAGCTGGTCGCCAAACACGATCCCGACAATAAATTTGCTATGCCCTATATGTGGGCGACGACCGGGATTGGCTATAACGTTGATAAAGTTAAAGCGGTGCTGGGCGAAAACGCGCCCGTCGATAGCTGGGACTTGATCCTCAAACCTGAAAATCTGGAAAAACTGAAAAGCTGCGGTGTCTCTTTCCTGGATGCGCCAGAAGAAGTTTTTGCTACCGTGTTGAATTATCTCGGCAAAGATCCCAACAGCACTAAAGCGGATGATTACACCGGACCGGCAACAGATCTGCTGTTAAAGCTGCGCCCGAACATTCGTTATTTCCATTCATCTCAATACATTAACGACCTGGCAAACGGCGATATTTGCGTCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCAATAAAGCAGCCACGCCGCTGGTGAGTGCGGAAGTCCGTGAGAACCCAGGTATTTATCCGCCTGCGGATGTTCGTGCGAAGCTGTTCACTCTGAAAGTGCAGGATCCGAAAATCGACCGTGTGCGCACCCGCGCGTGGACCAAAGTGAAGAGCGGAAAATAA", 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"GeneID:945476" - ], - [ - "gene_synonym", - "ASAP:ABE-0002915" - ], - [ - "gene_synonym", - "NP_415376.4" - ], - [ - "gene_synonym", - "GI:90111177" - ], - [ - "gene_synonym", - "potG" - ], - [ - "gene_synonym", - "ECK0846" - ] - ], - "dna_sequence": "GTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGACGCCGCTATTAGAAATCCGCAACCTGACCAAATCCTACGATGGTCAACATGCGGTGGATGATGTCAGCCTGACCATCTACAAAGGTGAAATCTTCGCGCTGCTGGGCGCATCCGGCTGTGGCAAGTCCACGCTGCTGCGTATGCTGGCAGGTTTCGAACAACCTTCTGCCGGACAGATAATGCTTGATGGCGTCGATTTGTCACAGGTTCCGCCTTACCTGCGCCCCATCAATATGATGTTTCAGTCTTACGCGCTGTTTCCGCATATGACCGTGGAACAGAACATCGCTTTTGGCCTGAAACAGGACAAACTACCGAAAGCGGAAATTGCCAGCCGGGTCAATGAGATGCTCGGCCTGGTGCATATGCAGGAGTTCGCCAAACGCAAACCGCATCAGCTTTCCGGTGGTCAGCGACAACGTGTGGCCCTGGCCCGAAGCCTTGCGAAGCGCCCGAAACTATTACTGCTCGATGAGCCGATGGGCGCGCTGGATAAAAAGCTGCGTGACAGGATGCAGCTTGAAGTGGTGGATATTCTGGAGCGCGTCGGTGTGACTTGTGTGATGGTCACCCACGATCAGGAAGAGGCGATGACCATGGCGGGGCGCATCGCCATTATGAATCGTGGGAAATTTGTCCAGATTGGCGAACCGGAAGAGATCTACGAGCATCCGACTACCCGCTATAGCGCCGAATTTATTGGCTCGGTAAACGTCTTTGAAGGCGTACTCAAAGAGCGTCAGGAAGATGGCCTGGTGCTTGATTCGCCGGGGCTGGTGCATCCACTGAAAGTCGACGCGGATGCCTCGGTGGTCGATAACGTGCCGGTACATGTGGCGCTGCGCCCGGAAAAAATCATGCTTTGCGAAGAGCCGCCCGCCAATGGTTGTAACTTCGCGGTGGGGGAGGTGATACACATTGCCTATCTCGGCGATCTTTCGGTGTATCACGTTCGTCTGAAAAGTGGGCAGATGATTAGCGCCCAGCTACAAAACGCCCATCGTCATCGTAAAGGGTTACCGACCTGGGGCGACGAAGTGCGTTTGTGCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAA", 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"NP_415377.1" - ], - [ - "gene_synonym", - "JW0840" - ], - [ - "gene_synonym", - "GeneID:945475" - ], - [ - "gene_synonym", - "ASAP:ABE-0002917" - ], - [ - "gene_synonym", - "potH" - ], - [ - "gene_synonym", - "ECK0847" - ] - ], - "dna_sequence": "ATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGGCGGATTTAAGCTGTGGTTGTCGCAGCTGCAAATGAAGCATGGGCGCAAACTGGTCATTGCGTTGCCATATATCTGGTTGATCTTGCTGTTTCTGCTGCCATTTCTGATTGTCTTTAAAATAAGCCTGGCGGAGATGGCGCGCGCTATTCCACCTTATACCGAACTGATGGAGTGGGCTGACGGGCAACTGTCCATCACTCTTAATCTCGGTAATTTTCTGCAACTGACCGACGATCCGCTCTATTTCGATGCTTATCTCCAGTCGCTACAGGTGGCTGCGATTTCGACATTTTGCTGTTTACTGATCGGCTATCCGCTGGCGTGGGCGGTGGCGCACAGTAAGCCTTCGACCCGTAATATTTTATTACTACTGGTGATCCTGCCGTCGTGGACCTCGTTTCTGATCCGCGTTTATGCCTGGATGGGAATATTAAAAAACAACGGTGTGCTGAATAATTTTCTGCTGTGGCTGGGGGTTATCGATCAACCGCTGACCATTCTGCATACCAATCTGGCCGTTTATATCGGCATTGTTTACGCTTACGTGCCGTTTATGGTACTGCCGATTTATACCGCGTTGATTCGTATTGATTATTCGCTGGTGGAAGCAGCGCTGGATCTCGGTGCACGACCGCTGAAAACGTTCTTTACTGTGATCGTGCCGCTGACTAAAGGTGGGATTATTGCCGGATCGATGCTGGTGTTTATCCCGGCTGTGGGCGAGTTTGTGATCCCGGAACTGCTCGGTGGCCCGGACAGCATCATGATCGGGCGCGTGCTATGGCAAGAGTTTTTCAATAACCGCGACTGGCCGGTGGCCTCGGCGGTAGCGATCATCATGTTGCTGCTGCTAATTGTGCCGATAATGTGGTTCCACAAACACCAGCAAAAAAGCGTGGGAGAACACGGATGA", - "dna_sequence_length": 954, - "functions": [ - "putrescine ABC transporter permease" - ], - "id": "CDS_838", - "location": [ - [ - "NC_000913", - 896134, - "+", - 954 - ] - ], - "md5": "01cd393be45300d1e7326f6a5f378dfc", - "parent_gene": "", - "protein_md5": "fbb9ceae98d4f58b446a0a1a0d3eab79", - "protein_translation": "MSTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLFLLPFLIVFKISLAEMARAIPPYTELMEWADGQLSITLNLGNFLQLTDDPLYFDAYLQSLQVAAISTFCCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAALDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVAIIMLLLLIVPIMWFHKHQQKSVGEHG", - "protein_translation_length": 317, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0002919" - ], - [ - "gene_synonym", - "b0857" - ], - [ - "gene_synonym", - "GI:16128825" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFL1" - ], - [ - "gene_synonym", - "JW0841" - ], - [ - "gene_synonym", - "GeneID:945485" - ], - [ - "gene_synonym", - "ECK0848" - ], - [ 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"MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIFNTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQITAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQLQ", - "protein_translation_length": 162, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75817" - ], - [ - "gene_synonym", - "GI:16128827" - ], - [ - "gene_synonym", - "GeneID:947260" - ], - [ - "gene_synonym", - "JW0843" - ], - [ - "gene_synonym", - "rumB" - ], - [ - "gene_synonym", - "b0859" - ], - [ - "gene_synonym", - "rlmC" - ], - [ - "gene_synonym", - "NP_415380.1" - ], - [ - "gene_synonym", - "ybjF" - ], - [ - "gene_synonym", - "ASAP:ABE-0002924" - ], - [ - "gene_synonym", - "EcoGene:EG13427" - ], - [ - "gene_synonym", - "ECK0850" - ] - ], - "dna_sequence": "ATGCAGTGCGCACTTTACGACGCGGGTCGCTGTCGTTCCTGTCAGTGGATAATGCAGCCGATTCCAGAGCAACTCTCCGCTAAAACCGCCGATCTTAAAAATCTGCTCGCCGACTTTCCGGTTGAGGAATGGTGCGCGCCGGTGTCAGGCCCGGAACAAGGGTTTCGTAATAAAGCCAAAATGGTGGTGAGTGGTAGCGTTGAAAAACCACTGCTCGGTATGCTGCATCGCGATGGCACACCAGAAGACCTTTGTGACTGCCCGCTTTATCCTGCCTCATTTGCGCCCGTTTTTGCGGCGCTAAAACCGTTTATCGCCCGAGCGGGGTTAACGCCCTACAACGTGGCGCGTAAGCGTGGCGAACTGAAATACATTCTGCTGACTGAAAGCCAGAGTGATGGAGGCATGATGCTGCGCTTTGTACTGCGTTCTGATACCAAGCTGGCGCAACTGCGTAAGGCGCTGCCGTGGTTACACGAACAACTACCGCAGCTGAAAGTTATTACCGTCAATATTCAGCCGGTACATATGGCGATTATGGAAGGGGAGACGGAGATCTACCTGACCGAACAACAGGCACTGGCGGAGCGTTTTAATGACGTACCGCTGTGGATCCGTCCGCAAAGTTTCTTCCAGACTAATCCGGCGGTCGCCAGCCAGTTGTACGCCACCGCGCGCGACTGGGTACGACAGCTGCCGGTTAAACATATGTGGGATCTGTTCTGCGGTGTGGGGGGCTTTGGTTTACACTGCGCGACGCCTGACATGCAGTTAACCGGGATCGAAATTGCATCAGAGGCCATTGCCTGTGCAAAGCAGTCAGCCGCTGAACTGGGCTTAACGCGTTTGCAATTTCAGGCGCTGGACTCCACTCAGTTTGCCACCGCTCAGGGGGATGTGCCGGAGCTGGTGCTGGTTAACCCGCCGCGCCGCGGCATTGGTAAACCGCTGTGTGATTATCTCTCAACGATGGCACCGCGTTTTATCATCTACTCCAGCTGTAACGCCCAAACTATGGCGAAAGATATCCGCGAACTGCCTGGGTTTCGTATTGAACGGGTGCAGCTTTTCGATATGTTCCCGCATACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAA", 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"gene_synonym", - "GeneID:948981" - ], - [ - "gene_synonym", - "ASAP:ABE-0002927" - ], - [ - "gene_synonym", - "JW0844" - ], - [ - "gene_synonym", - "artJ" - ], - [ - "gene_synonym", - "NP_415381.1" - ], - [ - "gene_synonym", - "ECK0851" - ] - ], - "dna_sequence": "ATGAAAAAGTTAGTTCTTGCCGCTTTACTTGCTTCCTTTACTTTCGGTGCTTCTGCCGCAGAGAAAATCAATTTTGGCGTTTCAGCCACCTATCCACCCTTTGAATCTATAGGTGCTAATAATGAGATTGTCGGCTTTGATATCGATCTGGCAAAAGCCTTGTGCAAACAAATGCAGGCAGAATGTACTTTTACTAATCACGCGTTCGACAGCCTGATCCCGTCCCTGAAATTCAGAAAATATGACGCCGTAATCTCCGGTATGGATATCACCCCGGAGCGTAGCAAACAGGTATCGTTTACCACGCCCTACTATGAAAACTCAGCCGTCGTGATTGCCAAAAAAGATACCTACAAAACGTTTGCCGATCTGAAAGGCAAACGTATTGGGATGGAAAACGGTACTACGCACCAGAAATATATTCAGGATCAGCACCCGGAAGTGAAAACTGTCTCTTATGACAGTTATCAGAATGCCTTTATCGATCTGAAAAATGGTCGTATTGATGGGGTATTTGGTGACACAGCGGTGGTAAACGAATGGCTGAAAACCAATCCACAACTTGGTGTTGCTACTGAGAAAGTGACCGATCCGCAATATTTTGGCACCGGCCTGGGCATCGCTGTACGTCCGGATAACAAAGCCCTGCTGGAAAAACTGAATAACGCGCTGGCAGCAATTAAAGCTGACGGTACTTATCAAAAAATCAGTGACCAGTGGTTCCCACAGTAA", 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"GeneID:949066" - ], - [ - "gene_synonym", - "b0861" - ], - [ - "gene_synonym", - "ECK0852" - ] - ], - "dna_sequence": "ATGTTTGAGTATTTACCCGAACTGATGAAAGGGCTACACACCAGCCTGACGCTAACCGTTGCCTCGCTGATTGTGGCACTGATTCTGGCATTGATTTTTACCATCATCCTGACGCTGAAAACGCCGGTGCTGGTGTGGCTGGTGCGGGGTTATATCACGCTGTTTACCGGTACGCCGCTGCTGGTGCAGATCTTCCTGATTTATTACGGGCCGGGCCAGTTTCCGACTTTGCAGGAGTATCCGGCACTGTGGCATTTGTTGTCAGAACCGTGGTTATGTGCGCTGATTGCGTTGTCGCTGAATAGTGCGGCGTATACCACGCAGCTGTTTTACGGTGCAATTCGTGCGATCCCGGAAGGTCAGTGGCAGTCCTGTAGCGCCCTGGGAATGAGCAAAAAAGATACGCTGGCGATCCTGCTGCCGTATGCCTTTAAACGCTCGCTCTCTTCTTATTCCAACGAAGTGGTGCTGGTATTCAAAAGTACCTCTCTGGCATACACCATTACGCTGATGGAAGTGATGGGATACAGCCAGTTGTTGTACGGACGCACCTACGATGTAATGGTGTTCGGTGCGGCAGGGATTATTTACCTGGTCGTTAACGGCCTGCTGACGCTGATGATGCGTCTGATCGAGCGCAAAGCGCTGGCATTCGAACGGCGAAATTAA", - "dna_sequence_length": 669, - "functions": [ - "arginine ABC transporter permease" - ], - "id": "CDS_843", - "location": [ - [ - "NC_000913", - 901534, - "-", - 669 - ] - ], - "md5": "3dc6149452e33f5c96a2efba264c29f1", - "parent_gene": "", - "protein_md5": "871e57acd61164ecb3799e3d96dfe186", - "protein_translation": "MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIPEGQWQSCSALGMSKKDTLAILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLLYGRTYDVMVFGAAGIIYLVVNGLLTLMMRLIERKALAFERRN", - "protein_translation_length": 222, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "artQ" - ], - [ - "gene_synonym", - "GI:16128830" - ], - [ - "gene_synonym", - "EcoGene:EG11626" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE34" - ], - [ - "gene_synonym", - "JW0846" - ], - [ - "gene_synonym", - "NP_415383.1" - ], - [ - "gene_synonym", - "GeneID:949046" - ], - [ - "gene_synonym", - "ECK0853" - ], - [ - "gene_synonym", - "ASAP:ABE-0002933" - ], - [ - "gene_synonym", - "b0862" - ] - ], - "dna_sequence": "ATGAATGAATTTTTTCCTTTAGCAAGCGCCGCCGGGATGACCGTCGGCCTTGCCGTTTGTGCATTGATTGTCGGGCTGGCGCTGGCGATGTTCTTTGCGGTATGGGAGTCGGCAAAATGGCGTCCTGTCGCGTGGGCAGGTTCAGCGCTGGTAACCATTCTGCGTGGCCTGCCAGAAATTCTGGTGGTGCTGTTTATCTATTTTGGCTCCTCGCAGCTGCTGCTGACGCTTTCGGATGGCTTCACTATCAATCTTGGGTTCGTGCAGATCCCAGTGCAGATGGACATTGAGAACTTCGACGTTAGCCCGTTCCTTTGTGGTGTCATCGCTCTGTCACTGCTGTATGCCGCCTATGCCTCGCAAACGCTTCGGGGCGCGTTGAAAGCGGTGCCGGTGGGTCAGTGGGAGTCTGGTCAGGCGCTGGGGCTGTCGAAATCGGCTATCTTTTTCCGTCTGGTGATGCCGCAGATGTGGCGTCATGCGCTGCCTGGCCTCGGTAACCAGTGGCTGGTGCTGCTGAAAGATACCGCGCTGGTCAGTTTGATTAGTGTGAATGATTTAATGCTGCAAACAAAAAGCATCGCTACTCGTACCCAGGAACCATTTACCTGGTACATTGTGGCGGCGGCGATTTACCTGGTGATCACCCTGCTCAGTCAGTACATTCTCAAACGCATTGACCTGCGCGCGACACGTTTTGAGCGGAGGCCCAGCTAA", - "dna_sequence_length": 717, - "functions": [ - "arginine ABC transporter permease" - ], - "id": "CDS_844", - "location": [ - [ - "NC_000913", - 902250, - "-", - 717 - ] - ], - "md5": "8b3147192ba1abb9ab948c37df33ea7a", - "parent_gene": "", - "protein_md5": "29a99a73c8fbca0837073871c144f116", - "protein_translation": "MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVSPFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERRPS", - "protein_translation_length": 238, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128831" - ], - [ - "gene_synonym", - "ASAP:ABE-0002937" - ], - [ - "gene_synonym", - "JW0847" - ], - [ - "gene_synonym", - "EcoGene:EG11625" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30859" - ], - [ - "gene_synonym", - "artI" - ], - [ - "gene_synonym", - "ECK0854" - ], - [ - "gene_synonym", - "NP_415384.1" - ], - [ - "gene_synonym", - "GeneID:948988" - ], - [ - "gene_synonym", - "b0863" - ] - ], - "dna_sequence": "ATGAAAAAAGTTCTGATTGCCGCGTTAATTGCAGGTTTTAGTCTTTCCGCCACAGCTGCCGAAACCATTCGTTTTGCTACCGAAGCCTCCTATCCTCCGTTTGAATCGATTGATGCAAACAACCAGATCGTTGGTTTTGACGTCGACCTGGCACAAGCGCTGTGTAAAGAGATTGATGCAACCTGCACTTTCTCTAACCAGGCGTTTGACAGCCTGATCCCAAGCCTGAAATTCCGTCGCGTAGAAGCCGTGATGGCGGGCATGGATATCACTCCGGAGCGTGAAAAGCAGGTGCTGTTTACCACCCCGTACTATGACAACTCTGCCCTGTTTGTGGGTCAGCAAGGCAAATACACCAGTGTTGATCAGCTGAAAGGCAAAAAAGTCGGCGTACAGAACGGGACGACACACCAGAAATTCATTATGGATAAGCACCCGGAAATCACTACCGTTCCGTATGACAGCTACCAGAACGCAAAACTGGATCTGCAAAACGGGCGTATCGACGGCGTCTTCGGTGACACCGCAGTGGTCACTGAGTGGCTGAAAGATAACCCGAAACTGGCGGCGGTGGGCGACAAAGTGACCGATAAAGATTACTTCGGCACTGGCCTCGGCATCGCGGTACGTCAGGGCAACACTGAGCTGCAGCAGAAACTCAACACTGCGCTGGAAAAAGTGAAGAAAGATGGCACTTACGAAACCATCTACAACAAATGGTTCCAGAAGTAA", - "dna_sequence_length": 732, - "functions": [ - "arginine transporter subunit" - ], - "id": "CDS_845", - "location": [ - [ - "NC_000913", - 902988, - "-", - 732 - ] - ], - "md5": "9537634be8d9e237cc117ca3239d018b", - "parent_gene": "", - "protein_md5": "8dada9975a23ec7b183368bc56ba560f", - "protein_translation": "MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTTPYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAKLDLQNGRIDGVFGDTAVVTEWLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQKLNTALEKVKKDGTYETIYNKWFQK", - "protein_translation_length": 243, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "artP" - ], - [ - "gene_synonym", - "GI:16128832" - ], - [ - "gene_synonym", - "JW0848" - ], - [ - "gene_synonym", - "ASAP:ABE-0002939" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAF6" - ], - [ - "gene_synonym", - "GeneID:945489" - ], - [ - "gene_synonym", - "EcoGene:EG11624" - ], - [ - "gene_synonym", - "b0864" - ], - [ - "gene_synonym", - "NP_415385.1" - ], - [ - "gene_synonym", - "ECK0855" - ] - ], - "dna_sequence": "ATGAGTATTCAATTAAACGGCATTAATTGCTTCTACGGCGCGCATCAGGCGCTGTTCGATATCACGCTGGATTGCCCACAGGGCGAAACGCTGGTGTTACTTGGCCCCAGCGGCGCGGGTAAAAGCTCGCTGCTGCGTGTACTCAATCTGCTTGAGATGCCGCGCTCCGGTACGCTCAACATTGCAGGCAACCATTTCGATTTCACCAAAACACCCTCTGACAAAGCGATTCGCGATTTGCGTCGTAACGTTGGCATGGTGTTTCAGCAATACAACCTGTGGCCGCATCTGACCGTGCAGCAAAACCTGATTGAAGCGCCCTGCCGTGTACTGGGGTTGAGTAAAGATCAGGCGCTGGCCCGTGCAGAAAAACTGCTGGAACGTCTGCGTCTCAAACCTTATAGCGATCGTTACCCGCTGCATCTTTCTGGTGGTCAGCAGCAGCGTGTTGCTATTGCCCGTGCGTTGATGATGGAACCGCAGGTACTGCTGTTCGATGAACCGACCGCCGCACTGGACCCGGAAATTACGGCACAAATCGTCAGCATCATTCGTGAGCTGGCAGAAACGAATATTACCCAGGTGATCGTCACCCACGAAGTTGAAGTGGCGCGTAAAACCGCCAGCCGAGTGGTGTATATGGAAAATGGTCATATCGTAGAACAAGGCGACGCGAGCTGCTTTACCGAGCCGCAAACCGAAGCATTTAAAAACTATCTCTCTCACTAA", - "dna_sequence_length": 729, - "functions": [ - "arginine ABC transporter ATPase" - ], - "id": "CDS_846", - "location": [ - [ - "NC_000913", - 903734, - "-", - 729 - ] - ], - "md5": "ad6c8a0967eafe7d98d7e6f58ad99012", - "parent_gene": "", - "protein_md5": "70563109a451dc689384814cec661e65", - "protein_translation": "MSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTEPQTEAFKNYLSH", - "protein_translation_length": 242, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0849" - ], - [ - "gene_synonym", - "GI:16128833" - ], - [ - "gene_synonym", - "GeneID:945491" - ], - [ - "gene_synonym", - "EcoGene:EG13685" - ], - [ - "gene_synonym", - "ybjP" - ], - [ - "gene_synonym", - "NP_415386.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75818" - ], - [ - "gene_synonym", - "ASAP:ABE-0002941" - ], - [ - "gene_synonym", - "b0865" - ], - [ - "gene_synonym", - "ECK0856" - ] - ], - "dna_sequence": "ATGCGCTACAGCAAATTGACAATGCTTATCCCCTGCGCACTGCTCCTCAGTGCCTGCACCACAGTCACTCCAGCTTATAAAGATAACGGCACACGCAGTGGTCCTTGCGTTGAAGGAGGCCCGGATAACGTGGCCCAGCAATTTTATGACTACCGCATTTTGCACCGCAGCAACGACATCACCGCCTTGCGCCCTTATCTGAGCGACAAACTGGCGACACTGCTTAGCGATGCCTCCCGGGATAATAACCATCGGGAACTACTGACCAACGATCCATTCTCCAGTCGAACCACCTTGCCAGATAGCGCCCACGTTGCCAGTGCATCGACTATCCCTAATCGTGATGCCCGTAACATTCCATTGCGCGTGGATCTCAAACAGGGTGACCAGGGTTGGCAGGATGAAGTGTTAATGATTCAGGAAGGCCAGTGTTGGGTCATCGACGATGTGCGTTACTTAGGCGGTAGCGTTCATGCCACGGCGGGTACGCTCCGTCAGTCCATCGAGAATCGCTAA", - "dna_sequence_length": 516, - "functions": [ - "lipoprotein" - ], - "id": "CDS_847", - "location": [ - [ - "NC_000913", - 904467, - "-", - 516 - ] - ], - "md5": "62dc5ad9fb2eb5a88addc5166671e731", - "parent_gene": "", - "protein_md5": "3cce71b9bb9f5f5fa19189455ca5884d", - "protein_translation": "MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPDNVAQQFYDYRILHRSNDITALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPDSAHVASASTIPNRDARNIPLRVDLKQGDQGWQDEVLMIQEGQCWVIDDVRYLGGSVHATAGTLRQSIENR", - "protein_translation_length": 171, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128834" - ], - [ - "gene_synonym", - "EcoGene:EG13686" - ], - [ - "gene_synonym", - "ybjQ" - ], - [ - "gene_synonym", - "GeneID:945493" - ], - [ - "gene_synonym", - "NP_415387.1" - ], - [ - "gene_synonym", - "JW0850" - ], - [ - "gene_synonym", - "ASAP:ABE-0002945" - ], - [ - "gene_synonym", - "ECK0857" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8C1" - ], - [ - "gene_synonym", - "b0866" - ] - ], - "dna_sequence": "ATGCAATTTTCTACAACCCCAACTCTGGAAGGCCAGACCATCGTTGAATATTGCGGTGTGGTGACCGGCGAAGCGATTTTAGGTGCCAATATTTTCCGTGATTTCTTTGCCGGTATCCGCGATATCGTTGGCGGACGTTCCGGTGCGTATGAAAAAGAACTGCGTAAAGCACGGGAGATCGCCTTTGAGGAATTAGGCTCCCAGGCGCGGGCGCTGGGGGCCGATGCCGTCGTCGGTATTGATATCGACTACGAAACGGTCGGGCAAAACGGCAGTATGCTGATGGTTAGCGTCAGCGGTACGGCGGTGAAAACGCGTCGATGA", - "dna_sequence_length": 324, - "functions": [ - "UPF0145 family protein" - ], - "id": "CDS_848", - "location": [ - [ - "NC_000913", - 904593, - "+", - 324 - ] - ], - "md5": "b9bb8d69469f83da966bb548261c6119", - "parent_gene": "", - "protein_md5": "f07736405e77d34a5b38d7f3018c699a", - "protein_translation": "MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTAVKTRR", - "protein_translation_length": 107, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945494" - ], - [ - "gene_synonym", - "EcoGene:EG13687" - ], - [ - "gene_synonym", - "ybjR" - ], - [ - "gene_synonym", - "amiD" - ], - [ - "gene_synonym", - "JW0851" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75820" - ], - [ - "gene_synonym", - "ASAP:ABE-0002947" - ], - [ - "gene_synonym", - "ECK0858" - ], - [ - "gene_synonym", - "NP_415388.1" - ], - [ - "gene_synonym", - "b0867" - ], - [ - "gene_synonym", - "GI:16128835" - ] - ], - "dna_sequence": "ATGAGAAGATTCTTCTGGCTGGTCGCTGCCGCTCTGTTATTGGCAGGGTGTGCAGGCGAAAAAGGCATTGTCGAGAAAGAGGGATATCAGCTTGATACCCGACGCCAGGCGCAGGCGGCGTATCCGCGCATTAAAGTGCTGGTGATCCACTACACCGCAGATGATTTTGATAGCTCGCTGGCGACACTGACCGATAAGCAGGTCAGCTCGCATTATCTGGTCCCTGCGGTACCACCGCGATACAACGGTAAACCGCGCATCTGGCAACTGGTGCCGGAACAAGAACTGGCCTGGCATGCGGGGATTAGCGCCTGGCGCGGGGCAACGCGCCTTAACGACACCTCTATTGGCATTGAGCTGGAAAACCGTGGCTGGCAAAAATCGGCCGGAGTGAAATATTTTGCCCCGTTTGAACCGGCACAGATTCAGGCGCTTATTCCACTGGCGAAAGATATTATTGCCCGTTATCACATCAAGCCGGAAAACGTAGTGGCACATGCGGATATCGCACCGCAGCGCAAAGACGATCCGGGGCCATTATTTCCCTGGCAGCAACTGGCGCAGCAGGGGATTGGTGCCTGGCCGGATGCGCAGCGGGTTAACTTTTACCTTGCCGGGCGCGCGCCGCACACACCGGTAGATACCGCGTCATTGCTGGAGCTTTTGGCGCGCTACGGTTATGACGTTAAACCTGATATGACACCGCGCGAGCAGCGGCGCGTGATTATGGCATTCCAGATGCATTTCCGCCCGACGTTATATAACGGCGAAGCGGATGCAGAAACTCAGGCGATTGCCGAAGCATTGCTGGAGAAATACGGGCAGGATTAG", - "dna_sequence_length": 831, - "functions": [ - "1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent", - "OM lipoprotein" - ], - "id": "CDS_849", - "location": [ - [ - "NC_000913", - 904913, - "+", - 831 - ] - ], - "md5": "7e8291778f67024fd024530ba0c37e56", - "parent_gene": "", - "protein_md5": "ccfd3f57e7436946f6800bbd1bef0075", - "protein_translation": "MRRFFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD", - "protein_translation_length": 276, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945495" - ], - [ - "gene_synonym", - "ybjS" - ], - [ - "gene_synonym", - "NP_415389.2" - ], - [ - "gene_synonym", - "JW5819" - ], - [ - "gene_synonym", - "EcoGene:EG13688" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75821" - ], - [ - "gene_synonym", - "b0868" - ], - [ - "gene_synonym", - "ECK0859" - ], - [ - "gene_synonym", - "GI:90111178" - ], - [ - "gene_synonym", - "ASAP:ABE-0002949" - ] - ], - "dna_sequence": "ATGAAGGTACTGGTTACCGGCGCCACCAGCGGCTTAGGTCGAAACGCGGTAGAGTTTTTATGCCAGAAAGGCATCAGCGTGCGAGCGACCGGTCGCAACGAGGCAATGGGCAAATTGCTGGAAAAAATGGGCGCAGAGTTTGTTCCGGCGGATCTGACCGAGCTGGTTTCATCACAAGCTAAAGTGATGCTCGCGGGCATTGATACGCTGTGGCACTGCTCCAGCTTTACCTCACCCTGGGGGACACAACAGGCTTTCGATCTGGCTAACGTTCGCGCCACTCGCCGCCTGGGTGAATGGGCTGTCGCCTGGGGTGTGCGTAACTTTATTCATATCTCTTCCCCCTCCCTGTACTTCGATTATCACCACCATCGCGATATTAAAGAAGATTTTCGCCCTCACCGCTTCGCCAACGAGTTTGCCCGCAGCAAAGCAGCCAGCGAAGAAGTGATCAATATGCTTTCGCAGGCGAATCCACAAACGCGCTTTACTATTCTGCGCCCACAAAGTCTGTTCGGACCGCACGATAAAGTCTTTATTCCCCGTCTGGCGCATATGATGCACCACTACGGCAGTATTCTGTTACCGCATGGCGGCAGTGCGCTGGTCGATATGACCTACTATGAAAATGCCGTGCACGCAATGTGGCTGGCAAGCCAGGAAGCCTGCGATAAGCTACCTTCCGGGCGTGTGTACAACATCACCAACGGCGAGCATCGCACACTGCGCAGCATCGTGCAGAAGCTGATCGACGAGTTGAATATTGACTGTCGTATTCGTTCCGTCCCCTACCCGATGCTGGATATGATCGCCCGCAGCATGGAGCGTTTAGGCCGCAAGTCAGCAAAAGAGCCGCCGCTGACCCACTACGGCGTCTCCAAGTTGAATTTTGACTTTACGCTGGATATTACGCGTGCGCAGGAAGAGTTAGGTTATCAGCCGGTCATCACCCTGGATGAAGGTATCGAGAAAACTGCCGCCTGGCTACGCGACCACGGAAAACTGCCGCGCTAA", 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"JW5116" - ], - [ - "gene_synonym", - "b0869" - ], - [ - "gene_synonym", - "ASAP:ABE-0002951" - ], - [ - "gene_synonym", - "GI:90111179" - ], - [ - "gene_synonym", - "EcoGene:EG13689" - ] - ], - "dna_sequence": "GTGCCGCAACGCATTTTAGTTCTCGGTGCCAGTGGCTACATTGGTCAGCATCTGGTGCGCACACTCAGCCAGCAAGGGCATCAGATCCTGGCGGCGGCACGTCATGTCGACAGGCTTGCAAAGCTGCAACTGGCAAACGTCAGTTGCCATAAAGTCGATCTCAGCTGGCCGGATAACCTACCGGCCCTGTTGCAGGATATCGATACGGTCTATTTTCTGGTGCACAGCATGGGCGAAGGCGGCGATTTTATCGCTCAGGAGCGCCAGGTGGCTCTCAACGTCCGCGATGCGCTACGTGAAGTACCAGTTAAGCAATTAATCTTTCTTAGTTCGTTGCAGGCCCCGCCACATGAGCAGTCGGATCATCTGCGTGCTCGTCAGGCTACGGCGGACATTCTGCGTGAAGCGAATGTACCCGTGACCGAACTGCGGGCCGGAATTATCGTTGGCGCAGGTTCCGCGGCGTTCGAAGTCATGCGCGATATGGTCTACAACCTGCCAGTCTTAACGCCTCCGCGCTGGGTTCGTTCACGCACCACGCCCATTGCGCTGGAAAACTTGCTGCACTATCTGGTTGCGTTGTTAGATCATCCGGCCAGCGAACACCGCATCTTCGAAGCCGCCGGACCAGAGGTGCTCAGTTATCAGCAACAGTTTGAACATTTTATGGCGGTGAGCGGTAAGCGCCGCTGGTTGATCCCCATCCCCCTCCCCACCCGCTGGATTTCGGTGTGGTTTCTCAATGTGATTACTTCCGTACCGCCCACCACCGCCAGGGCGTTGATTCAGGGGCTGAAACACGATCTGCTGGCGGATGATACCGCGCTACGTGCACTCATCCCACAACGGCTGATCGCTTTCGATGACGCGGTACGTAGCACGTTGAAAGAGGAGGAAAAACTGGTCAACTCCAGCGACTGGGGCTACGACGCTCAGGCCTTTGCCCGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCTTTATGGCAGGTAGTGAACCAAATCGGCGGTAAAGAGCGTTATTTCTTTGGCAATATTTTGTGGCAGACACGGGCGTTGATGGACCGCGCGATCGGTCATAAGCTGGCGAAAGGCCGCCCGGAGCGCGAATATTTACAGACTGGCGATGCGGTGGATAGCTGGAAAGTGATTGTCGTTGAACCGGAAAAACAACTTACGTTGTTATTTGGCATGAAAGCGCCGGGGCTGGGACGACTGTGTTTTAGCCTGGAAGATAAAGGCGACTATCGTACTATCGATGTCCGCGCTTTCTGGCATCCGCACGGTATGCCGGGGCTGTTTTACTGGTTATTGATGATCCCCGCGCATCTGTTTATTTTTCGCGGAATGGCAAAACAAATCGCCAGACTGGCAGAACAAAGCACAGATTAA", - "dna_sequence_length": 1431, - "functions": [ - "putative NAD-dependent oxidoreductase" - ], - "id": "CDS_851", - "location": [ - [ - "NC_000913", - 908282, - "-", - 1431 - ] - ], - "md5": "cb67c5737042501588366de33fc6f7f5", - "parent_gene": "", - "protein_md5": "877990fb3e06667fa67de63a60f8a30a", - "protein_translation": "MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIVVEPEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKQIARLAEQSTD", - "protein_translation_length": 476, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13690" - ], - [ - "gene_synonym", - "ybjU" - ], - [ - "gene_synonym", - "ECK0861" - ], - [ - "gene_synonym", - "JW0854" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75823" - ], - [ - "gene_synonym", - "NP_415391.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0002954" - ], - [ - "gene_synonym", - "GI:16128838" - ], - [ - "gene_synonym", - "ltaE" - ], - [ - "gene_synonym", - "GeneID:944955" - ], - [ - "gene_synonym", - "ltaA" - ], - [ - "gene_synonym", - "b0870" - ] - ], - "dna_sequence": "ATGATTGATTTACGCAGTGATACCGTTACCCGACCAAGCCGCGCCATGCTCGAAGCGATGATGGCCGCCCCGGTTGGGGACGACGTTTACGGAGACGACCCTACCGTTAATGCTCTGCAGGACTACGCAGCAGAGCTTTCCGGTAAAGAAGCCGCCATTTTTCTGCCTACCGGCACTCAGGCCAACCTGGTCGCTCTGCTCAGTCACTGCGAACGCGGCGAAGAGTATATTGTCGGTCAGGCCGCGCATAACTATCTGTTTGAAGCCGGTGGCGCGGCGGTGCTGGGCAGTATTCAACCGCAACCCATAGACGCGGCTGCCGACGGCACGCTACCGCTGGATAAAGTGGCGATGAAAATCAAACCCGACGATATCCATTTCGCCCGCACCAAATTACTCAGTCTGGAAAACACCCACAACGGCAAAGTGTTGCCGCGGGAATACCTGAAAGAAGCATGGGAATTTACCCGCGAGCGCAATCTGGCGCTGCATGTTGACGGTGCGCGCATCTTTAATGCCGTGGTGGCTTACGGCTGCGAACTGAAAGAGATCACGCAATATTGTGATTCGTTCACCATTTGCCTGTCGAAAGGTCTTGGGACGCCAGTCGGTTCATTACTCGTCGGTAATCGTGATTACATTAAACGTGCCATTCGCTGGCGGAAAATGACAGGTGGCGGGATGCGCCAGTCCGGCATTCTGGCTGCCGCCGGGATATATGCCCTGAAAAATAACGTTGCGCGCTTGCAGGAAGACCACGACAACGCTGCCTGGATGGCGGAGCAGCTGCGTGAAGCAGGCGCGGATGTGATGCGTCAGGACACCAATATGCTGTTTGTTCGCGTCGGGGAAGAAAATGCTGCCGCGTTAGGCGAATACATGAAAGCGAGAAACGTGCTGATTAACGCCTCGCCGATTGTCCGCCTGGTGACGCATCTTGACGTCTCGCGCGAACAACTGGCGGAAGTCGCCGCCCACTGGCGTGCATTCCTGGCGCGTTAA", - "dna_sequence_length": 1002, - "functions": [ - "L-allo-threonine aldolase, PLP-dependent" - ], - "id": "CDS_852", - "location": [ - [ - "NC_000913", - 909294, - "-", - 1002 - ] - ], - "md5": "1b9ddc72b6c6b67bd157752f8ff0e0c3", - "parent_gene": "", - "protein_md5": "47dbf2b29d17778ff54bad48adfcdd1f", - "protein_translation": "MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAAIFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQPIDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAIRWRKMTGGGMRQSGILAAAGIYALKNNVARLQEDHDNAAWMAEQLREAGADVMRQDTNMLFVRVGEENAAALGEYMKARNVLINASPIVRLVTHLDVSREQLAEVAAHWRAFLAR", - "protein_translation_length": 333, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0862" - ], - [ - "gene_synonym", - "GeneID:946132" - ], - [ - "gene_synonym", - "poxB" - ], - [ - "gene_synonym", - "EcoGene:EG10754" - ], - [ - "gene_synonym", - "GI:16128839" - ], - [ - "gene_synonym", - "JW0855" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07003" - ], - [ - "gene_synonym", - "ASAP:ABE-0002958" - ], - [ - "gene_synonym", - "NP_415392.1" - ], - [ - "gene_synonym", - "b0871" - ] - ], - "dna_sequence": "ATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTCGAATCGGCAGGGGTGAAACGCATCTGGGGAGTCACAGGCGACTCTCTGAACGGTCTTAGTGACAGTCTTAATCGCATGGGCACCATCGAGTGGATGTCCACCCGCCACGAAGAAGTGGCGGCCTTTGCCGCTGGCGCTGAAGCACAACTTAGCGGAGAACTGGCGGTCTGCGCCGGATCGTGCGGCCCCGGCAACCTGCACTTAATCAACGGCCTGTTCGATTGCCACCGCAATCACGTTCCGGTACTGGCGATTGCCGCTCATATTCCCTCCAGCGAAATTGGCAGCGGCTATTTCCAGGAAACCCACCCACAAGAGCTATTCCGCGAATGTAGTCACTATTGCGAGCTGGTTTCCAGCCCGGAGCAGATCCCACAAGTACTGGCGATTGCCATGCGCAAAGCGGTGCTTAACCGTGGCGTTTCGGTTGTCGTGTTACCAGGCGACGTGGCGTTAAAACCTGCGCCAGAAGGGGCAACCATGCACTGGTATCATGCGCCACAACCAGTCGTGACGCCGGAAGAAGAAGAGTTACGCAAACTGGCGCAACTGCTGCGTTATTCCAGCAATATCGCCCTGATGTGTGGCAGCGGCTGCGCGGGGGCGCATAAAGAGTTAGTTGAGTTTGCCGGGAAAATTAAAGCGCCTATTGTTCATGCCCTGCGCGGTAAAGAACATGTCGAATACGATAATCCGTATGATGTTGGAATGACCGGGTTAATCGGCTTCTCGTCAGGTTTCCATACCATGATGAACGCCGACACGTTAGTGCTACTCGGCACGCAATTTCCCTACCGCGCCTTCTACCCGACCGATGCCAAAATCATTCAGATTGATATCAACCCAGCCAGCATCGGCGCTCACAGCAAGGTGGATATGGCACTGGTCGGCGATATCAAGTCGACTCTGCGTGCATTGCTTCCATTGGTGGAAGAAAAAGCCGATCGCAAGTTTCTGGATAAAGCGCTGGAAGATTACCGCGACGCCCGCAAAGGGCTGGACGATTTAGCTAAACCGAGCGAGAAAGCCATTCACCCGCAATATCTGGCGCAGCAAATTAGTCATTTTGCCGCCGATGACGCTATTTTCACCTGTGACGTTGGTACGCCAACGGTGTGGGCGGCACGTTATCTAAAAATGAACGGCAAGCGTCGCCTGTTAGGTTCGTTTAACCACGGTTCGATGGCTAACGCCATGCCGCAGGCGCTGGGTGCGCAGGCGACAGAGCCAGAACGTCAGGTGGTCGCCATGTGCGGCGATGGCGGTTTTAGCATGTTGATGGGCGATTTCCTCTCAGTAGTGCAGATGAAACTGCCAGTGAAAATTGTCGTCTTTAACAACAGCGTGCTGGGCTTTGTGGCGATGGAGATGAAAGCTGGTGGCTATTTGACTGACGGCACCGAACTACACGACACAAACTTTGCCCGCATTGCCGAAGCGTGCGGCATTACGGGTATCCGTGTAGAAAAAGCGTCTGAAGTTGATGAAGCCCTGCAACGCGCCTTCTCCATCGACGGTCCGGTGTTGGTGGATGTGGTGGTCGCCAAAGAAGAGTTAGCCATTCCACCGCAGATCAAACTCGAACAGGCCAAAGGTTTCAGCCTGTATATGCTGCGCGCAATCATCAGCGGACGCGGTGATGAAGTGATCGAACTGGCGAAAACAAACTGGCTAAGGTAA", 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"aliases": [ - [ - "gene_synonym", - "hcr" - ], - [ - "gene_synonym", - "ybjV" - ], - [ - "gene_synonym", - "ECK0863" - ], - [ - "gene_synonym", - "GI:16128840" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75824" - ], - [ - "gene_synonym", - "GeneID:947660" - ], - [ - "gene_synonym", - "NP_415393.1" - ], - [ - "gene_synonym", - "JW5117" - ], - [ - "gene_synonym", - "EcoGene:EG13691" - ], - [ - "gene_synonym", - "b0872" - ], - [ - "gene_synonym", - "ASAP:ABE-0002960" - ] - ], - "dna_sequence": "ATGACGATGCCAACGAATCAATGCCCGTGGCGGATGCAGGTTCATCACATTACGCAAGAAACGCCGGATGTGTGGACGATTTCCCTGATTTGCCACGATTACTACCCATATCGCGCCGGGCAATATGCACTGGTCAGCGTGCGAAACTCAGCGGAAACGCTGCGTGCTTACACCATTTCCTCCACGCCAGGCGTGAGTGAATATATCACCCTGACCGTGCGGCGGATTGATGACGGTGTCGGCTCCCAGTGGCTGACGCGCGATGTAAAACGCGGTGATTATCTCTGGCTTTCGGACGCGATGGGGGAATTTACCTGCGACGATAAAGCAGAAGATAAATTCCTGTTGCTGGCGGCAGGCTGCGGCGTCACGCCGATTATGTCGATGCGTCGCTGGCTTGCGAAGAACCGTCCACAGGCCGATGTGCGGGTGATCTACAACGTGCGTACGCCGCAGGATGTTATTTTCGCCGATGAGTGGCGTAACTATCCGGTAACGCTGGTGGCAGAAAATAACGTTACCGAAGGCTTTATCGCTGGTCGTCTCACTCGCGAACTGCTGGCAGGTGTACCTGACTTAGCTTCACGTACCGTGATGACCTGCGGCCCGGCTCCGTATATGGATTGGGTAGAGCAGGAAGTGAAAGCGCTCGGCGTGACGCGTTTCTTTAAAGAGAAATTCTTCACCCCAGTAGCAGAAGCGGCGACCAGCGGTCTGAAATTCACCAAACTGCAACCGGCACGAGAATTTTACGCCCCGGTTGGCACCACGCTACTGGAGGCGCTGGAAAGCAATAACGTTCCGGTTGTCGCTGCCTGCCGTGCGGGTGTTTGCGGCTGCTGTAAGACAAAAGTGGTTTCCGGTGAATATACGGTGAGCAGCACAATGACGCTGACCGACGCCGAAATCGCTGAAGGTTACGTACTGGCCTGCTCCTGCCATCCGCAGGGGGATTTGGTTCTCGCATAA", - "dna_sequence_length": 969, - "functions": [ - "HCP oxidoreductase, NADH-dependent" - ], - "id": "CDS_854", - "location": [ - [ - "NC_000913", - 912150, - "-", - 969 - ] - ], - "md5": "ff8019735465bb65ee9ce11361ad7a47", - "parent_gene": "", - "protein_md5": "37c1b625531bd8753073f23acdb6b836", - "protein_translation": "MTMPTNQCPWRMQVHHITQETPDVWTISLICHDYYPYRAGQYALVSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMGEFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVRVIYNVRTPQDVIFADEWRNYPVTLVAENNVTEGFIAGRLTRELLAGVPDLASRTVMTCGPAPYMDWVEQEVKALGVTRFFKEKFFTPVAEAATSGLKFTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAGVCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLVLA", - "protein_translation_length": 322, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ybjW" - ], - [ - "gene_synonym", - "ECK0864" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75825" - ], - [ - "gene_synonym", - "JW0857" - ], - [ - "gene_synonym", - "hcp" - ], - [ - "gene_synonym", - "NP_415394.4" - ], - [ - "gene_synonym", - "EcoGene:EG13692" - ], - [ - "gene_synonym", - "GeneID:946592" - ], - [ - "gene_synonym", - "b0873" - ], - [ - "gene_synonym", - "GI:90111180" - ], - [ - "gene_synonym", - "ASAP:ABE-0002962" - ] - ], - "dna_sequence": "ATGTTTTGTGTGCAATGTGAACAAACTATCCGTACTCCGGCAGGAAACGGCTGCTCATACGCGCAGGGGATGTGTGGTAAAACGGCGGAAACTTCTGACCTTCAGGATTTACTCATCGCGGCGCTGCAAGGGCTTTCTGCCTGGGCGGTAAAAGCGCGTGAATACGGCATCATCAACCACGATGTTGACAGCTTCGCGCCACGTGCCTTTTTCTCAACCCTGACCAACGTTAACTTCGATTCTCCGCGTATTGTCGGCTACGCTCGTGAAGCGATTGCCCTGCGCGAGGCGCTGAAAGCGCAATGCCTGGCTGTAGATGCCAACGCGCGCGTCGATAACCCGATGGCTGACCTGCAACTGGTGAGCGACGATCTCGGCGAGCTGCAACGTCAGGCAGCAGAATTTACCCCTAACAAAGATAAAGCGGCGATTGGCGAAAACATTCTCGGCCTGCGTCTGCTGTGCCTGTATGGCCTGAAAGGTGCGGCGGCCTATATGGAACACGCGCATGTTCTCGGTCAATACGACAACGATATTTATGCCCAGTACCATAAAATCATGGCGTGGCTGGGGACCTGGCCTGCCGATATGAACGCGCTTCTTGAGTGTTCAATGGAAATCGGCCAGATGAACTTCAAAGTGATGAGCATTCTGGATGCAGGCGAAACCGGTAAATACGGTCACCCGACGCCAACCCAGGTCAACGTCAAAGCGACGGCGGGTAAATGCATTCTGATTTCCGGTCACGATCTCAAAGATCTCTACAACCTGCTGGAACAGACCGAAGGCACGGGCGTTAATGTCTACACCCACGGCGAAATGCTGCCTGCGCATGGCTACCCGGAGCTGCGTAAATTCAAGCATCTGGTCGGTAACTACGGCAGCGGCTGGCAGAATCAGCAAGTGGAGTTCGCTCGTTTCCCTGGCCCCATCGTGATGACCTCGAACTGCATCATCGACCCAACCGTAGGCGCTTATGACGATCGTATCTGGACCCGCAGCATTGTTGGCTGGCCTGGCGTGCGTCATCTGGACGGTGATGATTTCTCTGCGGTTATCACCCAGGCGCAACAGATGGCAGGCTTCCCGTACAGCGAAATTCCGCACCTTATCACCGTGGGTTTTGGTCGCCAGACGCTGCTTGGCGCTGCTGATACGCTGATTGATCTGGTGAGCCGTGAAAAACTGCGTCATATCTTCCTGCTTGGTGGCTGTGACGGCGCACGCGGCGAGCGCCACTACTTCACCGATTTCGCCACCAGCGTGCCGGATGACTGCCTGATCCTGACCCTCGCCTGTGGTAAATATCGCTTTAACAAACTTGAGTTTGGCGATATCGAAGGTCTGCCGCGTCTGGTAGATGCAGGTCAATGTAACGATGCTTACTCAGCGATTATTCTGGCTGTCACTCTGGCAGAGAAACTGGGCTGCGGTGTCAACGATCTGCCGCTGTCGCTGGTGCTCTCCTGGTTTGAACAGAAAGCGATCGTCATTCTGCTGACGCTGCTTTCTCTGGGCGTGAAAAATATCGTCACCGGCCCGACTGCACCTGGTTTCCTGACACCAGACCTGCTGGCGGTGCTGAACGAGAAATTCGGCCTGCGTTCTATCACCACTGTTGAAGAAGACATGAAGCAACTGTTGAGCGCGTAA", - "dna_sequence_length": 1653, - "functions": [ - "hybrid-cluster [4Fe-2S-2O] subunit of anaerobic terminal reductases" - ], - "id": "CDS_855", - "location": [ - [ - "NC_000913", - 913814, - "-", - 1653 - ] - ], - "md5": "e2c97e4abc6662b6cee3de9c1d11effe", - "parent_gene": "", - "protein_md5": "97f76dcbb43aa9cfd949ecf15a5341ac", - "protein_translation": "MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA", - "protein_translation_length": 550, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0865" - ], - [ - "gene_synonym", - "JW0858" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75826" - ], - [ - "gene_synonym", - "NP_415395.2" - ], - [ - "gene_synonym", - "GeneID:947142" - ], - [ - "gene_synonym", - "ybjE" - ], - [ - "gene_synonym", - "EcoGene:EG13426" - ], - [ - "gene_synonym", - "b0874" - ], - [ - "gene_synonym", - "ASAP:ABE-0002966" - ], - [ - "gene_synonym", - "GI:90111181" - ] - ], - "dna_sequence": "ATGTTTTCTGGGCTGTTAATCATTCTGGTTCCCCTGATTGTGGGTTACCTCATTCCGCTTCGCCAACAAGCTGCGTTAAAAGTTATTAATCAGCTATTAAGCTGGATGGTTTACCTTATTCTCTTTTTTATGGGTATCAGTCTGGCGTTTCTCGATAACCTCGCCAGTAACCTGTTGGCGATTCTGCATTATTCTGCCGTCAGTATTACCGTTATTTTACTGTGTAATATTGCCGCCCTGATGTGGCTGGAGCGAGGCCTGCCGTGGCGCAACCACCATCAGCAAGAAAAACTCCCGTCGCGTATTGCGATGGCGCTGGAGTCGCTAAAACTGTGCGGCGTAGTAGTGATTGGTTTTGCCATTGGTCTAAGTGGACTGGCTTTCTTACAACACGCGACCGAAGCCAGTGAATACACGTTAATTTTGCTACTTTTCCTCGTTGGTATTCAGTTGCGCAATAATGGCATGACCTTAAAGCAGATTGTCCTTAATCGCCGGGGAATGATTGTCGCCGTGGTGGTGGTTGTCAGTTCATTAATTGGTGGTTTAATTAACGCCTTTATTCTTGATCTCCCCATCAATACCGCGCTGGCAATGGCCTCCGGTTTCGGCTGGTATTCTCTTTCCGGTATTTTATTGACCGAATCTTTTGGTCCGGTAATCGGGAGCGCGGCGTTTTTTAATGATCTGGCCCGTGAACTGATTGCTATTATGTTGATCCCTGGGCTGATTCGCCGCAGCCGCTCTACTGCACTGGGCTTATGCGGTGCCACATCAATGGATTTCACCCTGCCCGTTCTTCAACGTACTGGCGGGCTGGATATGGTCCCGGCGGCAATTGTTCACGGTTTTATTCTTAGCCTGTTAGTGCCGATCCTCATCGCCTTTTTCTCTGCGTAA", - "dna_sequence_length": 900, - "functions": [ - "putative transporter" - ], - "id": "CDS_856", - "location": [ - [ - "NC_000913", - 914857, - "-", - 900 - ] - ], - "md5": "c51c4a47e51377eeae286ad010e5f4ce", - "parent_gene": "", - "protein_md5": "4b7a3f51272ca18bde25fb5620f014f3", - "protein_translation": "MFSGLLIILVPLIVGYLIPLRQQAALKVINQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVVSSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA", - "protein_translation_length": 299, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0866" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60844" - ], - [ - "gene_synonym", - "JW0859" - ], - [ - "gene_synonym", - "bniP" - ], - [ - "gene_synonym", - "aqpZ" - ], - [ - "gene_synonym", - "GI:16128843" - ], - [ - "gene_synonym", - "GeneID:945497" - ], - [ - "gene_synonym", - "NP_415396.1" - ], - [ - "gene_synonym", - "EcoGene:EG13270" - ], - [ - "gene_synonym", - "b0875" - ], - [ - "gene_synonym", - "ASAP:ABE-0002976" - ] - ], - "dna_sequence": "ATGTTCAGAAAATTAGCAGCTGAATGTTTTGGTACTTTCTGGCTTGTTTTTGGTGGCTGTGGTAGTGCTGTACTGGCCGCAGGCTTCCCGGAATTAGGCATTGGTTTTGCCGGCGTGGCGTTGGCGTTCGGTCTGACCGTTCTGACGATGGCCTTTGCTGTTGGTCATATTTCTGGTGGTCATTTTAACCCGGCGGTCACTATTGGTTTATGGGCTGGCGGACGTTTTCCGGCAAAAGAAGTCGTTGGCTACGTAATTGCCCAGGTTGTCGGCGGTATTGTTGCAGCGGCGCTGCTGTATTTAATTGCCAGTGGTAAAACGGGTTTTGACGCGGCAGCCAGCGGTTTTGCTTCTAACGGTTATGGCGAGCATTCACCAGGCGGTTATTCCATGCTTTCCGCGCTGGTAGTTGAACTGGTATTGAGTGCAGGTTTCCTGTTGGTGATCCACGGCGCAACCGACAAATTCGCGCCGGCAGGTTTTGCGCCGATCGCTATTGGTCTGGCCTTAACCCTGATTCACTTAATTAGTATTCCGGTGACTAACACTTCTGTTAACCCGGCGCGCAGCACCGCGGTTGCTATCTTCCAGGGCGGCTGGGCATTAGAACAACTGTGGTTCTTCTGGGTGGTGCCAATTGTCGGCGGCATTATCGGTGGTCTGATTTACCGGACCCTGCTGGAAAAGCGTGATTAA", - "dna_sequence_length": 696, - "functions": [ - "aquaporin Z" - ], - "id": "CDS_857", - "location": [ - [ - "NC_000913", - 916047, - "-", - 696 - ] - ], - "md5": "6f183158a51f4975629178e55813282e", - "parent_gene": "", - "protein_md5": "29786e341a0244c771452f53e29cfce5", - "protein_translation": "MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0867" - ], - [ - "gene_synonym", - "JW0860" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75828" - ], - [ - "gene_synonym", - "GeneID:945498" - ], - [ - "gene_synonym", - "ASAP:ABE-0002980" - ], - [ - "gene_synonym", - "ybjD" - ], - [ - "gene_synonym", - "GI:16128844" - ], - [ - "gene_synonym", - "b0876" - ], - [ - "gene_synonym", - "EcoGene:EG13425" - ], - [ - "gene_synonym", - "NP_415397.1" - ] - ], - "dna_sequence": "ATGATTCTTGAGCGCGTTGAAATTGTGGGTTTTCGCGGTATCAACCGTTTGTCGTTGATGCTGGAACAAAACAACGTCCTGATTGGGGAGAACGCGTGGGGTAAATCCAGCTTGCTGGACGCCTTAACTCTGCTGCTATCGCCAGAATCAGATCTCTACCATTTTGAGCGCGACGATTTCTGGTTCCCGCCGGGAGATATCAACGGGCGAGAACATCATCTGCATATTATTTTGACCTTCCGCGAATCGCTGCCAGGCCGACATCGGGTTCGCCGTTATCGGCCGCTGGAAGCGTGCTGGACGCCATGCACCGATGGCTATCACCGTATTTTTTATCGTCTGGAAGGGGAGAGTGCGGAAGACGGCAGCGTGATGACACTGCGCAGTTTTCTCGATAAAGACGGACATCCGATTGATGTCGAGGATATTAACGATCAGGCACGCCATCTGGTGCGTTTAATGCCGGTGCTGCGCTTGCGTGATGCCCGTTTTATGCGCCGTATTCGTAACGGCACGGTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGGCGGCGAGCCAGCAATGAGCAACGAAGCTGGCGCTATCTGGATATCATCAACCGGATGATTGACCGACCTGGTGGGCGCTCGTATCGGGTTATTTTGCTCGGCCTATTTGCTACTTTGTTGCAGGCAAAAGGCACATTGCGACTGGATAAAGACGCCCGTCCATTGTTGCTGATCGAAGATCCAGAAACCCGTTTACACCCCATTATGCTTTCAGTTGCCTGGCATCTGTTGAATCTTCTGCCATTGCAGCGCATTGCCACCACCAACTCGGGTGAGTTGCTTTCGTTAACGCCGGTAGAGCATGTTTGCCGACTGGTACGTGAGTCCTCGCGCGTTGCCGCCTGGCGTCTGGGGCCGAGTGGCTTGAGTACCGAAGATAGCCGACGCATATCCTTTCACATTCGTTTTAACCGTCCGTCATCGCTGTTTGCACGCTGCTGGTTGCTGGTGGAAGGGGAAACGGAAACCTGGGTTATCAATGAACTGGCGCGTCAGTGCGGACATCATTTTGATGCCGAAGGGATCAAGGTCATTGAGTTTGCCCAGTCCGGGCTAAAGCCACTGGTTAAATTTGCCCGCCGAATGGGGATTGAATGGCATGTACTGGTCGATGGCGATGAAGCAGGGAAGAAATATGCCGCTACGGTACGCAGCCTGTTGAATAACGATCGGGAAGCCGAACGAGAACATTTAACGGCGTTACCGGCGCTGGATATGGAACATTTTATGTATCGCCAGGGATTTTCCGATGTGTTCCACCGCATGGCGCAAATCCCGGAAAATGTACCGATGAATCTACGCAAAATTATCTCGAAAGCGATCCATCGCTCTTCCAAACCCGATCTTGCCATTGAAGTGGCAATGGAGGCAGGACGTCGTGGTGTGGACTCCGTACCGACGCTGCTGAAAAAAATGTTCTCACGCGTGCTGTGGCTGGCGCGCGGTCGCGCGGATTAA", - "dna_sequence_length": 1659, - "functions": [ - "putative OLD family ATP-dependent endonuclease", - "DUF2813 family protein" - ], - "id": "CDS_858", - "location": [ - [ - "NC_000913", - 916473, - "+", - 1659 - ] - ], - "md5": "52ecaaf5724b81d256353e55e50bd5e2", - "parent_gene": "", - "protein_md5": "c638f0eb1591de97e2a5d99f3d012df4", - "protein_translation": "MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD", - "protein_translation_length": 552, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0861" - ], - [ - "gene_synonym", - "EcoGene:EG13693" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75829" - ], - [ - "gene_synonym", - "GeneID:946025" - ], - [ - "gene_synonym", - "ECK0868" - ], - [ - "gene_synonym", - "ybjX" - ], - [ - "gene_synonym", - "ASAP:ABE-0002982" - ], - [ - "gene_synonym", - "GI:16128845" - ], - [ - "gene_synonym", - "NP_415398.1" - ], - [ - "gene_synonym", - "b0877" - ] - ], - "dna_sequence": "ATGGTGAAATCGACGCCATGTATAACCATTGATTTCATGAATATGTCGCAGCTAACTGAACGGACCTTTACGCCATCTGAATCTCTCAGCAGCCTGTCACTTTTTCTTAGTCTGGCACGTGGACAGTGTCGGCCGGGTAAATTCTGGCATCGCCGTAGTTTTCGCCAGAAATTTTTGCTGCGCTCGTTGATTATGCCGCGTTTAAGCGTTGAGTGGATGAACGAACTTTCCCACTGGCCTAATCTCAATGTATTGTTAACGCGCCAGCCGCGACTGCCTGTGCGTCTGCATCGCCCTTACCTTGCGGCGAATCTTAGCCGTAAGCAATTGCTGGAGGCGTTACGTTACCATTATGCGTTACTCCGCGAATGTATGTCGGCGGAAGAATTCAGCTTATATTTGAATACCCCCGGGCTGCAACTGGCGAAGCTGGAAGGCAAAAACGGCGAGCAGTTCACGCTTGAGCTGACCATGATGATCTCAATGGATAAAGAAGGTGACAGCACAATCCTGTTCCGCAACAGCGAAGGTATTCCTCTGGCAGAGATCACGTTTACCCTGTGTGAATATCAGGGGAAAAGAACGATGTTTATTGGCGGACTGCAAGGCGCAAAATGGGAAATTCCACATCAGGAAATCCAGAATGCGACGAAAGCCTGCCACGGGCTATTTCCCAAACGCCTCGTGATGGAAGCGGCCTGTCTGTTTGCCCAACGTTTGCAGGTAGAGCAGATTATTGCCGTCAGCAATGAAACGCATATTTACCGCAGCCTGCGTTATCGCGATAAAGAAGGCAAGATCCACGCTGATTACAACGCTTTCTGGGAATCGGTTGGCGGCGTATGTGATGCTGAACGCCATTACCGCCTTCCAGCACAGATAGCACGAAAAGAGATTGCCGAAATCGCCAGTAAAAAACGGGCTGAATACCGTCGGCGCTATGAGATGCTCGACGCTATTCAGCCACAAATGGCCACGATGTTTCGCGGTTAA", - "dna_sequence_length": 993, - "functions": [ - "DUF535 family protein" - ], - "id": "CDS_859", - "location": [ - [ - "NC_000913", - 919120, - "-", - 993 - ] - ], - "md5": "8d6ea3c0ba37a430fa0992ac638663b1", - "parent_gene": "", - "protein_md5": "0faa22a23ece1f6fc9ce2f4c176eb87f", - "protein_translation": "MVKSTPCITIDFMNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRECMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG", - "protein_translation_length": 330, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0862" - ], - [ - "gene_synonym", - "EcoGene:EG13694" - ], - [ - "gene_synonym", - "macA" - ], - [ - "gene_synonym", - "GeneID:947322" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75830" - ], - [ - "gene_synonym", - "ybjY" - ], - [ - "gene_synonym", - "NP_415399.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0002986" - ], - [ - "gene_synonym", - "b0878" - ], - [ - "gene_synonym", - "ECK0869" - ], - [ - "gene_synonym", - "GI:90111182" - ] - ], - "dna_sequence": "ATGAAAAAGCGGAAAACCGTGAAGAAGCGTTACGTTATTGCGCTGGTGATAGTCATCGCCGGACTGATTACGTTATGGAGAATTCTTAACGCACCCGTGCCGACTTATCAGACGCTGATTGTGCGCCCCGGTGATTTACAGCAAAGCGTGCTGGCGACCGGAAAGCTGGACGCGCTGCGTAAGGTTGATGTGGGCGCGCAGGTCAGCGGTCAGTTGAAAACTCTGTCGGTGGCGATTGGCGATAAAGTAAAAAAAGACCAGCTTTTAGGGGTTATTGATCCTGAACAGGCTGAAAACCAGATTAAGGAGGTCGAAGCAACGCTGATGGAGCTACGTGCGCAGCGGCAGCAGGCGGAAGCGGAGCTGAAACTGGCGCGGGTGACGTATTCCCGTCAGCAACGTCTGGCACAAACGAAGGCTGTTTCACAGCAGGATCTCGACACCGCCGCGACGGAGATGGCTGTGAAACAGGCGCAAATTGGCACCATTGACGCGCAAATCAAGCGCAATCAGGCTTCTCTCGATACGGCTAAAACCAATCTCGATTACACTCGCATCGTTGCCCCGATGGCCGGGGAAGTCACGCAAATCACCACTCTGCAAGGCCAGACGGTGATTGCCGCACAACAAGCACCGAACATTCTGACGCTGGCAGATATGAGCGCCATGCTGGTAAAAGCGCAGGTTTCTGAAGCGGATGTAATCCACCTGAAGCCGGGGCAAAAAGCCTGGTTTACGGTGCTTGGCGATCCACTGACGCGCTACGAGGGGCAAATCAAGGATGTACTACCGACGCCGGAAAAGGTTAACGACGCTATTTTCTATTACGCCCGTTTTGAAGTCCCCAACCCCAATGGTTTGCTGCGGCTGGATATGACTGCGCAAGTGCATATTCAGCTCACCGATGTGAAAAATGTGCTGACGATCCCTCTGTCGGCGTTAGGCGATCCGGTTGGCGATAATCGTTATAAAGTCAAATTGTTGCGTAATGGTGAAACACGCGAGCGTGAAGTGACGATTGGCGCACGTAACGATACCGATGTTGAGATTGTCAAAGGGCTTGAAGCGGGCGATGAAGTGGTGATTGGTGAGGCCAAACCAGGAGCTGCACAATGA", - "dna_sequence_length": 1116, - "functions": [ - "macrolide transporter membrane fusion protein (MFP) component" - ], - "id": "CDS_860", - "location": [ - [ - "NC_000913", - 919235, - "+", - 1116 - ] - ], - "md5": "43f35ae918141e43c1f8bd0a7960ad80", - "parent_gene": "", - "protein_md5": "818289fe750ff8acad8606672e58ca13", - "protein_translation": "MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ", - "protein_translation_length": 371, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0863" - ], - [ - "gene_synonym", - "EcoGene:EG13695" - ], - [ - "gene_synonym", - "ybjZ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75831" - ], - [ - "gene_synonym", - "macB" - ], - [ - "gene_synonym", - "GI:16128847" - ], - [ - "gene_synonym", - "b0879" - ], - [ - "gene_synonym", - "ECK0870" - ], - [ - "gene_synonym", - "ASAP:ABE-0002989" - ], - [ - "gene_synonym", - "NP_415400.1" - ], - [ - "gene_synonym", - "GeneID:945164" - ] - ], - "dna_sequence": "ATGACGCCTTTGCTCGAATTAAAGGATATTCGTCGCAGCTATCCTGCCGGTGATGAGCAGGTTGAGGTGCTGAAGGGCATCAGCCTCGATATTTATGCGGGTGAGATGGTCGCGATTGTTGGCGCTTCGGGTTCCGGTAAATCGACCCTGATGAATATTCTCGGCTGTCTGGATAAGGCCACCAGCGGCACCTATCGCGTCGCCGGTCAGGATGTTGCCACGCTGGACGCCGATGCGCTGGCGCAACTGCGCCGCGAGCATTTCGGCTTTATTTTCCAGCGTTACCATTTGCTTTCGCATTTAACCGCCGAGCAGAACGTTGAAGTACCCGCCGTCTATGCTGGTCTTGAGCGGAAACAGCGACTGCTTCGTGCCCAGGAGTTGCTGCAACGGCTGGGGCTGGAAGACCGTACAGAGTATTATCCGGCACAGCTTTCGGGTGGTCAGCAACAGCGCGTCAGCATCGCGCGGGCATTGATGAACGGTGGTCAGGTAATTCTTGCCGATGAACCAACCGGCGCACTGGACAGCCATTCTGGCGAAGAGGTGATGGCGATCCTGCATCAGCTGCGCGATCGTGGGCATACGGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTGACGATGGCATGGCGGGCGCTGGCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTCGTGGTGGGTGACGCCGCCAAACAAATGGTGCTGGCGGATATTCGTTCTATTGGTACGAATACTATTGATGTCTATCCCGGGAAAGATTTTGGCGATGACGATCCGCAATATCAGCAGGCGCTGAAGTACGACGACTTAATCGCCATCCAAAAACAACCGTGGGTCGCCTCAGCCACACCTGCCGTCTCGCAAAACCTGCGCCTGCGTTATAACAATGTTGATGTTGCTGCCAGTGCCAATGGCGTGAGCGGCGATTATTTTAATGTCTATGGCATGACCTTCAGTGAAGGAAACACCTTTAATCAGGAGCAGCTGAACGGTCGTGCGCAGGTCGTGGTTCTCGACAGTAATACTCGCCGCCAGCTTTTCCCCCATAAAGCAGATGTGGTTGGCGAGGTGATTCTGGTCGGCAATATGCCCGCCAGAGTCATTGGTGTGGCGGAAGAAAAACAGTCGATGTTTGGTAGCAGTAAAGTGCTGCGTGTCTGGCTACCTTACAGCACGATGTCCGGGCGAGTTATGGGCCAGTCGTGGCTTAACTCCATTACTGTCAGGGTGAAAGAAGGATTTGACAGCGCCGAGGCGGAACAGCAACTCACGCGTTTACTTTCACTGCGCCACGGAAAGAAGGATTTCTTTACCTGGAACATGGACGGCGTCTTGAAAACTGTTGAAAAGACCACACGTACTTTACAACTGTTTCTGACGCTGGTGGCGGTGATTTCGCTGGTGGTGGGCGGTATTGGTGTAATGAATATTATGCTGGTGTCAGTGACCGAGCGGACGCGGGAAATTGGCATTCGCATGGCTGTAGGTGCGCGAGCAAGCGATGTTTTGCAACAGTTCCTGATCGAAGCCGTACTGGTTTGCCTGGTCGGTGGCGCGTTGGGAATAACACTGTCACTGTTAATTGCTTTCACCTTGCAGCTTTTCTTACCCGGCTGGGAGATTGGTTTTTCACCGTTGGCGCTGCTGCTGGCGTTTCTCTGCTCGACGGTCACCGGGATTTTATTTGGCTGGTTACCCGCACGAAATGCGGCACGACTGGATCCAGTAGATGCTCTGGCACGAGAGTAA", 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"protein_translation_length": 648, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cspH" - ], - [ - "gene_synonym", - "GeneID:945669" - ], - [ - "gene_synonym", - "JW0864" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A968" - ], - [ - "gene_synonym", - "EcoGene:EG11111" - ], - [ - "gene_synonym", - "ASAP:ABE-0002991" - ], - [ - "gene_synonym", - "ybjA" - ], - [ - "gene_synonym", - "b0880" - ], - [ - "gene_synonym", - "ECK0871" - ], - [ - "gene_synonym", - "GI:16128848" - ], - [ - "gene_synonym", - "cspD" - ], - [ - "gene_synonym", - "NP_415401.1" - ] - ], - "dna_sequence": "ATGGAAAAGGGTACTGTTAAGTGGTTCAACAATGCCAAAGGGTTTGGTTTCATCTGCCCTGAAGGCGGCGGCGAAGATATTTTCGCTCATTATTCCACCATTCAGATGGATGGTTACAGAACGCTAAAAGCTGGACAATCCGTTCAGTTTGATGTCCACCAGGGGCCAAAAGGCAATCACGCCAGTGTTATTGTGCCCGTCGAAGTAGAAGCGGCAGTCGCATAG", - "dna_sequence_length": 225, - "functions": [ - "inhibitor of DNA replication, cold shock protein homolog" - ], - "id": "CDS_862", - "location": [ - [ - "NC_000913", - 922590, - "-", - 225 - ] - ], - "md5": "b12368a14dbc4f40c027df3b8d7c0584", - "parent_gene": "", - "protein_md5": "2af9790425e583c73e4c4e65cf6a70d1", - "protein_translation": "MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA", - "protein_translation_length": 74, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14241" - ], - [ - "gene_synonym", - "JW0865" - ], - [ - "gene_synonym", - "GeneID:948443" - ], - [ - "gene_synonym", - "NP_415402.1" - ], - [ - "gene_synonym", - "clpS" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8Q6" - ], - [ - "gene_synonym", - "GI:16128849" - ], - [ - "gene_synonym", - "ASAP:ABE-0002998" - ], - [ - "gene_synonym", - "b0881" - ], - [ - "gene_synonym", - "yljA" - ], - [ - "gene_synonym", - "ECK0872" - ] - ], - "dna_sequence": "ATGGGTAAAACGAACGACTGGCTGGACTTTGATCAACTGGCGGAAGAAAAAGTTCGCGACGCGCTAAAACCGCCATCTATGTATAAAGTGATATTAGTCAATGATGATTACACTCCGATGGAGTTTGTTATTGACGTGTTACAAAAATTCTTTTCTTATGATGTAGAACGTGCAACGCAATTGATGCTCGCTGTTCACTACCAGGGGAAGGCCATTTGCGGAGTCTTTACCGCCGAGGTTGCAGAAACCAAAGTGGCGATGGTGAACAAGTACGCGAGGGAGAATGAGCATCCATTGCTGTGTACGCTAGAAAAAGCCTGA", - "dna_sequence_length": 321, - "functions": [ - "regulatory protein for ClpA substrate specificity" - ], - "id": "CDS_863", - "location": [ - [ - "NC_000913", - 922913, - "+", - 321 - ] - ], - "md5": "201a29b44d4cf745c6de3ac41c0673b9", - "parent_gene": "", - "protein_md5": "3cfca27767229b6aaa0738a6149bd45a", - "protein_translation": "MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA", - "protein_translation_length": 106, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003001" - ], - [ - "gene_synonym", - "JW0866" - ], - [ - "gene_synonym", - "GeneID:945764" - ], - [ - "gene_synonym", - "NP_415403.1" - ], - [ - "gene_synonym", - "lopD" - ], - [ - "gene_synonym", - "EcoGene:EG10156" - ], - [ - "gene_synonym", - "b0882" - ], - [ - "gene_synonym", - "GI:16128850" - ], - [ - "gene_synonym", - "clpA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABH9" - ], - [ - "gene_synonym", - "ECK0873" - ] - ], - "dna_sequence": "ATGCTCAATCAAGAACTGGAACTCAGTTTAAATATGGCTTTCGCCAGAGCGCGCGAGCACCGTCATGAGTTTATGACCGTCGAGCACTTGTTACTGGCGCTGCTCAGTAACCCATCTGCCCGGGAGGCGCTGGAAGCGTGTTCTGTGGATTTGGTTGCGCTCCGTCAGGAACTGGAAGCCTTTATTGAACAAACCACACCCGTTCTGCCTGCCAGTGAAGAGGAGCGCGACACACAGCCGACGCTGAGTTTTCAGCGTGTACTGCAACGTGCGGTCTTCCATGTCCAGTCCTCCGGTCGCAATGAGGTTACCGGTGCAAACGTTCTGGTCGCTATCTTTAGCGAACAGGAGTCGCAGGCGGCATATCTGTTGCGTAAACATGAAGTCAGCCGTCTCGATGTGGTGAACTTTATCTCTCATGGCACGCGTAAAGACGAGCCGACACAGTCTTCTGATCCTGGCAGCCAGCCAAACAGCGAAGAACAAGCTGGTGGGGAGGAACGTATGGAGAATTTCACGACGAACCTGAATCAGCTTGCGCGCGTGGGCGGAATCGACCCACTGATTGGTCGTGAGAAGGAGCTGGAGCGTGCTATTCAGGTTCTCTGCCGTCGCCGTAAAAACAACCCGCTGCTGGTGGGGGAATCTGGTGTCGGTAAAACCGCGATTGCGGAAGGTCTTGCCTGGCGAATTGTTCAGGGCGATGTGCCGGAAGTGATGGCTGACTGTACGATTTACTCTCTCGATATCGGTTCTCTGTTAGCGGGCACAAAATATCGCGGCGACTTTGAAAAACGTTTTAAAGCGTTGCTCAAGCAGCTGGAGCAGGACACTAACAGCATCCTGTTTATTGATGAGATCCACACCATTATCGGTGCGGGTGCAGCGTCTGGTGGTCAGGTCGATGCGGCTAACCTAATCAAACCGTTGCTCTCCAGCGGTAAAATTCGTGTAATTGGTTCGACAACCTATCAGGAGTTCAGCAACATTTTCGAGAAAGACCGTGCTCTGGCGCGTCGCTTCCAGAAAATTGATATTACTGAACCGTCGATCGAAGAAACTGTTCAAATCATCAATGGCCTGAAACCGAAGTATGAAGCGCACCACGACGTGCGTTATACCGCAAAAGCGGTGCGTGCGGCGGTAGAGCTGGCGGTGAAATACATTAACGATCGTCATCTGCCGGATAAAGCCATTGATGTTATCGACGAAGCGGGCGCTCGCGCACGCCTGATGCCGGTAAGCAAACGCAAGAAAACCGTTAATGTGGCGGATATTGAGTCCGTGGTGGCCCGTATTGCACGCATTCCAGAGAAGAGTGTTTCTCAGAGTGATCGTGATACCCTGAAAAACCTCGGCGATCGCTTGAAAATGCTGGTCTTCGGTCAGGATAAAGCCATTGAGGCGCTGACTGAAGCCATTAAGATGGCGCGTGCAGGTTTAGGTCACGAACATAAACCGGTTGGTTCGTTCCTGTTTGCCGGCCCTACCGGGGTCGGGAAAACAGAGGTGACGGTACAGCTTTCGAAAGCTTTGGGCATTGAGCTTCTGCGCTTTGATATGTCCGAGTATATGGAACGCCATACCGTCAGCCGTCTTATTGGTGCGCCTCCGGGATACGTTGGTTTTGATCAGGGCGGTTTGCTGACTGATGCGGTCATCAAGCATCCACATGCGGTGCTGCTGCTGGACGAAATCGAGAAAGCGCACCCGGACGTGTTCAATATTCTGTTGCAGGTGATGGATAACGGTACGCTGACCGATAACAACGGACGCAAAGCAGACTTCCGTAACGTGGTGCTGGTGATGACCACCAACGCCGGGGTACGGGAAACTGAGCGCAAATCCATTGGTCTTATCCACCAGGATAACAGCACCGATGCGATGGAAGAGATCAAGAAGATCTTTACACCGGAATTCCGTAACCGTCTCGACAACATTATCTGGTTTGATCATCTGTCAACCGACGTGATCCATCAGGTGGTGGATAAATTCATCGTCGAGTTGCAGGTTCAGCTGGATCAGAAAGGTGTTTCTCTGGAAGTGAGCCAGGAAGCGCGTAACTGGCTGGCCGAGAAAGGTTACGACCGGGCAATGGGCGCTCGTCCGATGGCGCGTGTCATCCAGGACAACCTGAAAAAACCGCTCGCCAACGAACTGCTGTTTGGTTCGCTGGTGGACGGCGGTCAGGTCACCGTCGCGCTGGATAAAGAGAAAAATGAGCTGACTTACGGATTCCAGAGTGCACAAAAGCACAAGGCGGAAGCAGCGCATTAA", 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"MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH", - "protein_translation_length": 758, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003005" - ], - [ - "gene_synonym", - "EcoGene:EG10504" - ], - [ - "gene_synonym", - "bypA1" - ], - [ - "gene_synonym", - "JW0867" - ], - [ - "gene_synonym", - "GeneID:945500" - ], - [ - "gene_synonym", - "infA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69222" - ], - [ - "gene_synonym", - "b0884" - ], - [ - "gene_synonym", - "GI:16128851" - ], - [ - "gene_synonym", - "ECK0875" - ], - [ - "gene_synonym", - "NP_415404.1" - ] - ], - "dna_sequence": "ATGGCCAAAGAAGACAATATTGAAATGCAAGGTACCGTTCTTGAAACGTTGCCTAATACCATGTTCCGCGTAGAGTTAGAAAACGGTCACGTGGTTACTGCACACATCTCCGGTAAAATGCGCAAAAACTACATCCGCATCCTGACGGGCGACAAAGTGACTGTTGAACTGACCCCGTACGACCTGAGCAAAGGCCGCATTGTCTTCCGTAGTCGCTGA", - "dna_sequence_length": 219, - "functions": [ - "translation initiation factor IF-1" - ], - "id": "CDS_865", - "location": [ - [ - "NC_000913", - 926443, - "-", - 219 - ] - ], - "md5": "ce54b86133436b3b1a5f9b38a3adbf6d", - "parent_gene": "", - "protein_md5": "7685e403ced062aa096db5195bf558e7", - "protein_translation": "MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8P1" - ], - [ - "gene_synonym", - "GeneID:945490" - ], - [ - "gene_synonym", - "JW0868" - ], - [ - "gene_synonym", - "ASAP:ABE-0003009" - ], - [ - "gene_synonym", - "NP_415405.1" - ], - [ - "gene_synonym", - "ycaA" - ], - [ - "gene_synonym", - "EcoGene:EG11112" - ], - [ - "gene_synonym", - "aat" - ], - [ - "gene_synonym", - "b0885" - ], - [ - "gene_synonym", - "GI:16128852" - ], - [ - "gene_synonym", - "ECK0876" - ] - ], - "dna_sequence": "ATGCGCCTGGTTCAGCTTTCTCGCCATTCAATAGCCTTCCCTTCCCCGGAAGGCGCATTACGTGAGCCTAACGGCCTGCTGGCACTTGGGGGCGATCTTAGCCCTGCGCGCCTGTTAATGGCTTACCAGCGTGGTATTTTTCCGTGGTTTTCTCCAGGCGACCCCATCCTCTGGTGGTCGCCCGATCCCCGCGCGGTGCTATGGCCAGAATCACTGCATATCAGCCGTAGTATGAAGCGATTTCATAAACGCTCGCCCTATCGTGTCACGATGAATTACGCTTTTGGTCAGGTCATTGAAGGCTGTGCCAGCGATCGCGAAGAAGGAACCTGGATCACGCGTGGCGTGGTCGAAGCCTACCATCGCCTTCACGAACTCGGCCATGCCCACTCCATTGAAGTCTGGCGTGAAGATGAGCTTGTCGGCGGTATGTACGGCGTGGCCCAGGGAACGCTATTTTGTGGCGAGTCCATGTTCAGCCGGATGGAAAATGCGTCTAAAACGGCGCTTCTGGTATTCTGTGAGGAATTTATCGGTCATGGCGGTAAGCTTATCGACTGCCAGGTCCTTAACGATCACACAGCATCGCTTGGTGCCTGCGAAATTCCCCGCCGGGATTACCTTAATTATCTCAATCAAATGCGCCTCGGACGATTGCCGAATAATTTCTGGGTACCACGATGCTTGTTTTCACCACAAGAATGA", - "dna_sequence_length": 705, - "functions": [ - "leucyl/phenylalanyl-tRNA-protein transferase" - ], - "id": "CDS_866", - "location": [ - [ - "NC_000913", - 927432, - "-", - 705 - ] - ], - "md5": "0badf82bbe5fad7de52aabb876b8e77f", - "parent_gene": "", - "protein_md5": "2457f4abafd37feb90a801064461ee69", - "protein_translation": "MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE", - "protein_translation_length": 234, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003012" - ], - [ - "gene_synonym", - "surB" - ], - [ - "gene_synonym", - "JW0869" - ], - [ - "gene_synonym", - "ycaB" - ], - [ - "gene_synonym", - "GeneID:945504" - ], - [ - "gene_synonym", - "NP_415406.1" - ], - [ - "gene_synonym", - "b0886" - ], - [ - "gene_synonym", - "mdrA" - ], - [ - "gene_synonym", - "GI:16128853" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23886" - ], - [ - "gene_synonym", - "EcoGene:EG10012" - ], - [ - "gene_synonym", - "cydC" - ], - [ - "gene_synonym", - "mdrH" - ], - [ - "gene_synonym", - "ECK0877" - ] - ], - "dna_sequence": "ATGCGCGCTTTGCTACCCTATCTGGCACTGTATAAACGTCATAAATGGATGTTAAGTCTTGGTATTGTGCTGGCAATTGTGACGCTGCTCGCCAGTATCGGTCTGTTGACACTTTCCGGCTGGTTCCTCTCGGCCTCAGCGGTTGCGGGGGTTGCCGGACTGTACAGCTTCAACTATATGCTACCCGCTGCGGGCGTGCGTGGCGCAGCAATCACCCGTACTGCCGGGCGCTATTTTGAACGTCTGGTAAGTCACGACGCGACTTTCCGCGTGTTGCAGCATCTGCGCATTTACACCTTCAGCAAATTGCTGCCCCTCTCCCCTGCCGGACTGGCGCGCTATCGTCAGGGCGAATTGCTCAATCGCGTGGTGGCGGATGTTGATACGCTCGATCATCTTTACCTGCGCGTTATCTCGCCGCTGGTGGGCGCTTTTGTGGTGATTATGGTGGTGACAATCGGGTTAAGTTTCCTTGATTTCACCCTCGCCTTTACGCTGGGCGGCATTATGTTACTGACGCTTTTCCTGATGCCACCGCTGTTTTATCGTGCGGGAAAAAGCACCGGGCAAAATCTGACTCATCTTCGCGGACAGTATCGCCAACAACTGACGGCCTGGCTGCAAGGGCAAGCTGAGCTGACCATTTTTGGTGCCAGCGATCGTTATCGCACGCAACTAGAGAATACAGAAATTCAATGGCTGGAAGCGCAACGCCGTCAATCTGAACTGACCGCATTGTCGCAAGCGATAATGCTGCTCATTGGCGCGTTAGCGGTGATCCTGATGCTGTGGATGGCGTCTGGCGGCGTTGGCGGCAATGCTCAACCCGGCGCGTTAATTGCCCTGTTTGTCTTCTGCGCGTTAGCCGCGTTTGAAGCACTGGCACCAGTAACGGGTGCATTTCAGCATCTGGGGCAAGTCATTGCCTCTGCCGTACGTATCTCTGACTTAACGGATCAAAAACCGGAGGTCACCTTTCCTGATACCCAAACTCGTGTTGCCGATCGCGTTTCGCTGACGTTACGGGATGTTCAGTTCACTTATCCGGAGCAATCTCAACAGGCACTTAAAGGGATTTCTCTTCAGGTAAACGCCGGGGAACATATAGCGATTCTCGGGCGAACCGGATGCGGCAAATCAACACTGTTACAACAGCTGACCCGCGCATGGGACCCGCAACAGGGCGAGATTTTGCTTAACGATAGCCCCATAGCCAGCCTGAATGAAGCGGCTCTACGACAGACCATCAGCGTTGTTCCTCAGCGAGTGCATCTGTTTAGCGCCACGCTGCGTGATAATCTTTTACTCGCCTCGCCTGGCAGTAGTGATGAGGCTCTGTCGGAGATCTTGCGTCGCGTTGGCCTGGAAAAGCTGCTCGAGGATGCAGGTCTCAACAGTTGGTTAGGTGAAGGCGGACGCCAGCTCTCCGGTGGTGAACTGCGCCGTCTGGCTATCGCCCGTGCGCTGTTACATGATGCGCCACTGGTGTTGCTGGATGAACCTACCGAAGGCTTAGATGCCACAACCGAAAGCCAGATCCTTGAATTGCTTGCAGAAATGATGCGTGAGAAAACGGTGTTAATGGTCACCCATCGACTTCGCGGACTCTCTCGTTTCCAACAAATAATAGTGATGGACAACGGGCAAATTATTGAGCAAGGTACTCACGCAGAACTGCTTGCCAGACAGGGGCGTTATTACCAGTTCAAGCAGGGTTTGTAA", 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[ - [ - "gene_synonym", - "NP_415407.1" - ], - [ - "gene_synonym", - "htrD" - ], - [ - "gene_synonym", - "EcoGene:EG11405" - ], - [ - "gene_synonym", - "ASAP:ABE-0003015" - ], - [ - "gene_synonym", - "GeneID:949052" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P29018" - ], - [ - "gene_synonym", - "JW0870" - ], - [ - "gene_synonym", - "b0887" - ], - [ - "gene_synonym", - "ECK0878" - ], - [ - "gene_synonym", - "GI:16128854" - ], - [ - "gene_synonym", - "cydD" - ] - ], - "dna_sequence": "ATGAATAAATCTCGTCAAAAAGAGTTAACCCGCTGGTTAAAACAGCAAAGCGTCATCTCCCAACGTTGGCTGAATATTTCTCGTCTGCTGGGCTTTGTGAGCGGCATATTGATCATTGCCCAGGCCTGGTTCATGGCGCGAATTCTGCAACATATGATTATGGAGAATATTCCCCGTGAAGCCCTGCTGCTTCCCTTTACGTTACTGGTTCTGACCTTTGTACTGCGCGCATGGGTGGTCTGGTTACGCGAACGGGTGGGTTATCACGCCGGGCAGCATATCCGCTTTGCCATCCGCCGTCAGGTTCTCGACCGTCTGCAACAAGCAGGGCCAGCGTGGATTCAGGGTAAACCTGCGGGGAGCTGGGCGACGCTGGTACTCGAGCAAATTGACGATATGCATGATTACTATGCACGCTATCTGCCGCAAATGGCGCTGGCAGTGTCGGTGCCGTTGCTGATTGTGGTGGCAATCTTCCCCTCTAACTGGGCTGCGGCGCTCATTCTGCTGGGCACTGCACCGTTAATTCCGTTGTTTATGGCGCTGGTTGGAATGGGGGCTGCCGATGCTAACCGACGTAACTTTCTCGCTCTTGCTCGCTTAAGTGGGCATTTCCTCGATCGCCTGCGCGGCATGGAAACATTGCGTATTTTTGGTCGTGGTGAAGCTGAAATTGAAAGTATTCGTTCTGCTTCGGAAGATTTCCGCCAACGGACAATGGAAGTGCTACGGCTGGCGTTTTTATCCTCCGGCATTCTCGAATTTTTTACCTCGCTGTCAATTGCTCTGGTGGCGGTCTACTTTGGTTTTTCCTATCTCGGCGAGCTGGATTTTGGTCACTACGATACCGGTGTGACGCTGGCTGCGGGTTTTCTGGCCCTGATCCTTGCGCCAGAGTTTTTCCAGCCATTACGCGATCTCGGTACGTTTTATCATGCTAAAGCCCAGGCTGTTGGCGCAGCTGACAGTCTGAAAACGTTTATGGAAACCCCGCTCGCCCATCCGCAACGTGGTGAGGCGGAATTAGCATCGACCGATCCGGTGACCATTGAGGCCGAGGAGCTGTTTATCACGTCGCCGGAAGGTAAAACGCTGGCCGGACCGCTGAACTTTACTTTGCCAGCAGGCCAACGTGCGGTGTTGGTTGGTCGCAGCGGTTCAGGTAAAAGCTCACTGCTGAACGCGCTTTCTGGTTTTCTCTCATATCAGGGATCGCTACGAATCAACGGGATAGAATTACGCGATTTATCACCAGAATCATGGCGTAAACATCTCTCCTGGGTTGGGCAAAACCCACAATTACCGGCAGCAACATTGCGGGATAACGTACTACTGGCGCGACCTGATGCCAGCGAACAAGAATTACAAGCAGCGCTGGATAACGCCTGGGTCAGCGAGTTTCTACCGCTCCTCCCACAAGGCGTTGATACGCCTGTTGGCGACCAGGCTGCCCGCCTTTCCGTGGGGCAGGCGCAGCGCGTGGCGGTGGCCCGTGCGTTACTAAATCCCTGTTCGCTATTACTGTTGGATGAACCCGCTGCCAGCCTTGATGCTCACAGTGAACAGCGCGTAATGGAGGCGCTGAATGCCGCCTCTCTGCGCCAGACAACGTTAATGGTCACCCACCAGTTAGAAGATCTTGCTGACTGGGATGTCATTTGGGTTATGCAGGATGGCCGGATTATTGAGCAAGGACGTTACGCGGAATTAAGTGTGGCTGGTGGCCCATTCGCCACATTACTGGCCCATCGTCAGGAGGAGATTTAA", 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{ - "aliases": [ - [ - "gene_synonym", - "ECK0879" - ], - [ - "gene_synonym", - "JW0871" - ], - [ - "gene_synonym", - "EcoGene:EG11032" - ], - [ - "gene_synonym", - "GeneID:949054" - ], - [ - "gene_synonym", - "ASAP:ABE-0003018" - ], - [ - "gene_synonym", - "NP_415408.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9P4" - ], - [ - "gene_synonym", - "trxB" - ], - [ - "gene_synonym", - "GI:16128855" - ], - [ - "gene_synonym", - "b0888" - ] - ], - "dna_sequence": "ATGGGCACGACCAAACACAGTAAACTGCTTATCCTGGGTTCAGGCCCGGCGGGATACACCGCTGCTGTCTACGCGGCGCGCGCCAACCTGCAACCTGTGCTGATTACCGGCATGGAAAAAGGCGGCCAACTGACCACCACCACGGAAGTGGAAAACTGGCCTGGCGATCCAAACGATCTGACCGGTCCGTTATTAATGGAGCGCATGCACGAACATGCCACCAAGTTTGAAACTGAGATCATTTTTGATCATATCAACAAGGTGGATCTGCAAAACCGTCCGTTCCGTCTGAATGGCGATAACGGCGAATACACTTGCGACGCGCTGATTATTGCCACCGGAGCTTCTGCACGCTATCTCGGCCTGCCCTCTGAAGAAGCCTTTAAAGGCCGTGGGGTTTCTGCTTGTGCAACCTGCGACGGTTTCTTCTATCGCAACCAGAAAGTTGCGGTCATCGGCGGCGGCAATACCGCGGTTGAAGAGGCGCTGTATCTGTCTAACATCGCTTCGGAAGTGCATCTGATTCACCGCCGTGACGGTTTCCGCGCGGAAAAAATCCTCATTAAGCGCCTGATGGATAAAGTGGAGAACGGCAACATCATTCTGCACACCAACCGTACGCTGGAAGAAGTGACCGGCGATCAAATGGGTGTCACTGGCGTTCGTCTGCGCGATACGCAAAACAGCGATAACATCGAGTCACTCGACGTTGCCGGTCTGTTTGTTGCTATCGGTCACAGCCCGAATACTGCGATTTTCGAAGGGCAGCTGGAACTGGAAAACGGCTACATCAAAGTACAGTCGGGTATTCATGGTAATGCCACCCAGACCAGCATTCCTGGCGTCTTTGCCGCAGGCGACGTGATGGATCACATTTATCGCCAGGCCATTACTTCGGCCGGTACAGGCTGCATGGCAGCACTTGATGCGGAACGCTACCTCGATGGTTTAGCTGACGCAAAATAA", - "dna_sequence_length": 966, - "functions": [ - "thioredoxin reductase, FAD/NAD(P)-binding" - ], - "id": "CDS_869", - "location": [ - [ - "NC_000913", - 932050, - "-", - 966 - ] - ], - "md5": "58e72ce2e3b730129509d00d71dd0b9a", - "parent_gene": "", - "protein_md5": "7adccd89b1dd7e60f54a814b65b92b41", - "protein_translation": "MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK", - "protein_translation_length": 321, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0872" - ], - [ - "gene_synonym", - "rblA" - ], - [ - "gene_synonym", - "GeneID:949051" - ], - [ - "gene_synonym", - "livR" - ], - [ - "gene_synonym", - "NP_415409.1" - ], - [ - "gene_synonym", - "ECK0880" - ], - [ - "gene_synonym", - "ASAP:ABE-0003023" - ], - [ - "gene_synonym", - "mbf" - ], - [ - "gene_synonym", - "oppI" - ], - [ - "gene_synonym", - "GI:16128856" - ], - [ - "gene_synonym", - "lrp" - ], - [ - "gene_synonym", - "lrs" - ], - [ - "gene_synonym", - "lss" - ], - [ - "gene_synonym", - "EcoGene:EG10547" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACJ0" - ], - [ - "gene_synonym", - "ihb" - ], - [ - "gene_synonym", - "alsB" - ], - [ - "gene_synonym", - "b0889" - ], - [ - "gene_synonym", - "lstR" - ] - ], - "dna_sequence": "ATGGTAGATAGCAAGAAGCGCCCTGGCAAAGATCTCGACCGTATCGATCGTAACATTCTTAATGAGTTGCAAAAGGATGGGCGTATTTCTAACGTCGAGCTTTCTAAACGTGTGGGACTTTCCCCAACGCCGTGCCTTGAGCGTGTGCGTCGGCTGGAAAGACAAGGGTTTATTCAGGGCTATACGGCGCTGCTTAACCCCCATTATCTGGATGCATCACTTCTGGTATTCGTTGAGATTACTCTGAATCGTGGCGCACCGGATGTGTTTGAACAATTCAATACCGCTGTACAAAAACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACACACGGACATACGTTGTTATGGAAGAAGTCAAGCAGAGTAATCGTCTGGTTATTAAGACGCGCTAA", - "dna_sequence_length": 495, - "functions": [ - "leucine-responsive global transcriptional regulator" - ], - "id": "CDS_870", - "location": [ - [ - "NC_000913", - 932595, - "+", - 495 - ] - ], - "md5": "e9b7482b9202ec5d1d8b46b6af179916", - "parent_gene": "", - "protein_md5": "60feb0dfbdfa96c198c39b45781a4348", - "protein_translation": "MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR", - "protein_translation_length": 164, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0873" - ], - [ - "gene_synonym", - "ECK0881" - ], - [ - "gene_synonym", - "ftsK" - ], - [ - "gene_synonym", - "dinH" - ], - [ - "gene_synonym", - "b0890" - ], - [ - "gene_synonym", - "GI:16128857" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46889" - ], - [ - "gene_synonym", - "GeneID:945102" - ], - [ - "gene_synonym", - "ASAP:ABE-0003027" - ], - [ - "gene_synonym", - "NP_415410.1" - ], - [ - "gene_synonym", - "EcoGene:EG13226" - ] - ], - "dna_sequence": "TTGAGCCAGGAATACATTGAAGACAAAGAAGTCACATTGACAAAGTTAAGTAGCGGCCGCCGCCTTCTGGAGGCGTTGCTGATCCTTATTGTCCTGTTTGCCGTCTGGTTGATGGCTGCCTTACTAAGCTTTAACCCTTCGGACCCCAGCTGGTCGCAAACGGCCTGGCATGAACCTATCCATAATTTAGGTGGGATGCCCGGTGCGTGGTTGGCAGATACGCTGTTCTTTATTTTTGGCGTGATGGCTTACACCATTCCCGTCATTATTGTCGGCGGTTGTTGGTTTGCCTGGCGTCATCAGTCCAGCGACGAATACATTGATTATTTTGCCGTTTCGCTACGCATCATTGGCGTTTTGGCGCTCATCCTTACCTCCTGTGGTCTGGCGGCAATCAACGCTGACGATATCTGGTATTTTGCCTCCGGTGGCGTCATTGGCAGCTTACTAAGCACTACGCTACAACCACTGCTACACAGTAGCGGGGGAACTATTGCGCTGCTCTGCGTTTGGGCAGCGGGCCTGACGTTGTTCACCGGTTGGTCATGGGTGACCATTGCTGAAAAACTCGGCGGCTGGATTTTAAACATTCTCACCTTCGCCAGTAATCGTACCCGTCGCGATGATACCTGGGTCGATGAAGATGAGTATGAAGACGACGAAGAGTATGAAGATGAAAATCACGGCAAACAGCATGAATCACGCCGTGCCCGTATTCTTCGCGGCGCGCTAGCGCGTCGTAAACGGTTGGCGGAAAAATTCATTAATCCGATGGGGCGGCAAACAGACGCTGCGTTGTTCTCCGGTAAGCGGATGGATGATGACGAAGAGATTACCTACACTGCACGCGGTGTGGCTGCCGACCCGGACGACGTCCTATTTTCGGGCAATCGTGCAACGCAGCCAGAATATGACGAATACGATCCATTATTAAACGGTGCGCCAATTACCGAACCTGTCGCTGTAGCAGCTGCTGCTACCACGGCGACACAAAGCTGGGCTGCGCCGGTTGAACCTGTGACTCAGACGCCGCCTGTTGCCTCTGTTGATGTTCCACCTGCGCAACCTACAGTAGCCTGGCAGCCTGTACCGGGTCCACAAACGGGAGAGCCGGTTATTGCTCCTGCACCGGAAGGTTACCCACAGCAGTCACAATATGCGCAGCCTGCAGTGCAATATAATGAGCCGCTGCAACAACCAGTACAGCCGCAGCAGCCGTATTATGCACCTGCAGCTGAACAACCTGCGCAACAGCCGTATTATGCCCCTGCGCCAGAACAACCGGTGGCAGGTAACGCCTGGCAAGCCGAAGAGCAGCAATCCACTTTTGCTCCACAGTCTACATACCAGACTGAGCAAACTTATCAGCAGCCAGCCGCTCAGGAGCCGTTGTACCAACAGCCGCAACCCGTTGAACAGCAGCCTGTTGTGGAGCCTGAACCCGTTGTAGAAGAGACAAAACCCGCGCGTCCGCCGCTTTACTACTTTGAAGAAGTTGAAGAGAAGCGAGCCCGTGAACGTGAACAACTTGCGGCCTGGTATCAACCGATTCCAGAACCGGTTAAAGAACCAGAACCGATCAAATCTTCGCTGAAAGCACCTTCTGTTGCAGCAGTACCTCCAGTAGAAGCCGCTGCCGCTGTTTCCCCGCTGGCATCTGGCGTGAAAAAAGCGACACTGGCGACGGGGGCTGCCGCAACCGTTGCCGCGCCAGTCTTCAGTCTGGCAAATAGCGGTGGACCGCGTCCTCAGGTCAAAGAGGGGATTGGTCCGCAGTTGCCACGACCGAAACGTATCCGCGTGCCAACTCGTCGTGAACTGGCGTCTTACGGTATTAAGCTGCCCTCACAGCGTGCGGCGGAAGAAAAAGCCCGTGAAGCCCAGCGCAATCAGTACGATTCTGGCGATCAGTACAACGATGATGAAATCGATGCGATGCAGCAGGATGAACTGGCACGTCAGTTCGCCCAGACACAGCAGCAACGCTATGGCGAACAGTATCAACATGATGTGCCCGTAAACGCAGAAGATGCAGATGCTGCGGCAGAGGCTGAACTGGCTCGTCAGTTTGCGCAAACTCAACAACAACGTTATTCCGGCGAACAACCGGCTGGGGCGAATCCGTTCTCGCTGGATGATTTTGAATTTTCGCCAATGAAAGCGTTGCTGGATGATGGTCCACACGAACCGTTGTTTACGCCAATTGTTGAACCTGTACAGCAGCCGCAACAACCGGTTGCACCGCAGCAGCAATATCAGCAGCCGCAACAACCAGTTCCGCCGCAGCCGCAGTATCAGCAGCCACAACAGCCGGTTGCGCCGCAGCCACAATATCAGCAGCCGCAACAACCGGTTGCGCCACAGCAGCAATATCAGCAGCCGCAACAACCGGTTGCGCCGCAGCAGCAGTATCAGCAGCCACAACAGCCAGTTGCGCCACAACCGCAGGATACCCTGCTTCATCCGCTGTTGATGCGTAATGGCGACAGCCGTCCGTTGCATAAACCGACGACGCCGCTGCCTTCTCTGGATTTGCTGACACCGCCGCCGAGCGAAGTGGAGCCGGTAGATACCTTTGCGCTTGAACAAATGGCTCGCCTGGTGGAAGCGCGTCTGGCTGATTTCCGTATTAAAGCCGATGTCGTCAATTACTCTCCGGGGCCGGTTATCACTCGCTTTGAATTGAACCTGGCACCGGGCGTAAAAGCGGCGCGCATTTCTAACTTGTCACGGGACCTTGCCCGTTCACTTTCGACGGTGGCGGTGCGTGTCGTTGAAGTTATTCCTGGCAAACCCTATGTAGGTCTGGAGTTACCGAATAAAAAACGACAAACCGTTTATCTGCGCGAAGTTTTGGATAACGCCAAATTCCGCGATAATCCGTCGCCATTAACCGTGGTGCTGGGTAAAGATATCGCCGGTGAGCCGGTGGTTGCCGATCTGGCGAAAATGCCGCACTTGTTGGTTGCGGGGACTACCGGTTCCGGTAAATCTGTCGGTGTGAACGCGATGATCCTGAGCATGCTTTATAAAGCACAGCCAGAAGATGTGCGTTTCATCATGATCGACCCGAAAATGCTGGAGCTTTCGGTTTATGAAGGCATTCCGCATCTGTTAACGGAAGTCGTTACTGATATGAAAGATGCCGCCAACGCGCTGCGCTGGTGTGTTAACGAGATGGAGCGTCGGTATAAACTGATGTCTGCGCTGGGTGTGCGTAATCTGGCGGGTTATAACGAAAAAATTGCTGAAGCCGATCGCATGATGCGTCCGATTCCAGACCCGTACTGGAAGCCGGGTGACAGTATGGATGCCCAGCATCCGGTGCTGAAAAAAGAACCATACATTGTGGTGTTGGTTGACGAATTTGCCGACCTGATGATGACGGTAGGTAAAAAAGTGGAAGAGCTGATAGCACGTCTGGCGCAAAAAGCCCGTGCCGCGGGTATCCACCTCGTACTGGCAACTCAGCGTCCATCGGTTGATGTTATTACTGGTCTGATTAAAGCGAATATTCCGACCCGTATCGCCTTTACCGTATCCAGTAAGATTGACTCACGTACCATTCTTGATCAGGCTGGCGCGGAATCACTGCTGGGTATGGGGGATATGCTCTACTCTGGGCCGAACTCCACGTTGCCGGTACGTGTCCATGGTGCTTTTGTTCGCGATCAGGAAGTTCATGCCGTGGTGCAGGACTGGAAAGCGCGTGGTCGCCCACAGTATGTTGATGGCATCACCTCCGACAGCGAAAGCGAAGGTGGTGCGGGTGGTTTCGATGGCGCTGAAGAACTGGATCCGTTGTTCGATCAGGCGGTGCAGTTTGTCACTGAAAAACGCAAAGCGTCAATTTCTGGCGTACAGCGTCAGTTCCGCATTGGTTATAACCGTGCAGCGCGTATTATCGAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAA", 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"MSQEYIEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVPPQPQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAPQQQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD", - "protein_translation_length": 1329, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "lolA" - ], - [ - "gene_synonym", - "GI:145698236" - ], - [ - "gene_synonym", - "JW0874" - ], - [ - "gene_synonym", - "EcoGene:EG12684" - ], - [ - "gene_synonym", - "yzzV" - ], - [ - "gene_synonym", - "ECK0882" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P61316" - ], - [ - "gene_synonym", - "ASAP:ABE-0003031" - ], - [ - "gene_synonym", - "b0891" - ], - [ - "gene_synonym", - "lplA" - ], - [ - "gene_synonym", - "GeneID:948989" - ], - [ - "gene_synonym", - "NP_415411.2" - ] - ], - "dna_sequence": "ATGAAAAAAATTGCCATCACCTGTGCATTACTCTCAAGCTTAGTAGCAAGCAGCGTTTGGGCTGATGCCGCAAGCGATCTGAAAAGCCGCCTGGATAAAGTCAGCAGCTTCCACGCCAGCTTCACACAAAAAGTGACTGACGGTAGCGGCGCGGCGGTGCAGGAAGGTCAGGGCGATCTGTGGGTGAAACGTCCAAACTTATTCAACTGGCATATGACACAACCTGATGAAAGCATTCTGGTTTCTGACGGTAAAACACTGTGGTTCTATAACCCGTTCGTTGAGCAAGCTACGGCAACCTGGCTGAAAGATGCCACCGGTAATACGCCGTTTATGCTGATTGCCCGCAACCAGTCCAGCGACTGGCAGCAGTACAATATCAAACAGAATGGCGATGACTTTGTCCTGACGCCGAAAGCCAGCAATGGCAATCTGAAGCAGTTCACCATTAACGTGGGACGTGATGGCACAATCCATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAG", - "dna_sequence_length": 612, - "functions": [ - "lipoprotein chaperone" - ], - "id": "CDS_872", - "location": [ - [ - "NC_000913", - 937372, - "+", - 612 - ] - ], - "md5": "342dcb8026c7b9e855223803b8f10b48", - "parent_gene": "", - "protein_md5": "abc501f5c77c7a30b01513b7fa11f8ce", - "protein_translation": "MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK", - "protein_translation_length": 203, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rarA" - ], - [ - "gene_synonym", - "ycaJ" - ], - [ - "gene_synonym", - "JW0875" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAZ4" - ], - [ - "gene_synonym", - "ECK0883" - ], - [ - "gene_synonym", - "EcoGene:EG12690" - ], - [ - "gene_synonym", - "b0892" - ], - [ - "gene_synonym", - "ASAP:ABE-0003034" - ], - [ - "gene_synonym", - "GeneID:945505" - ], - [ - "gene_synonym", - "mgsA" - ], - [ - "gene_synonym", - "NP_415412.1" - ], - [ - "gene_synonym", - "GI:16128859" - ] - ], - "dna_sequence": "GTGAGCAATCTGTCGCTCGATTTTTCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCGCGCGCTATCGAAGCCGGGCATTTACATTCTATGATCCTCTGGGGGCCGCCGGGTACCGGCAAAACAACTCTCGCTGAAGTGATTGCCCGCTATGCGAACGCTGATGTGGAACGTATTTCTGCCGTCACCTCTGGCGTGAAAGAGATTCGCGAGGCGATCGAGCGCGCCCGGCAAAACCGCAATGCAGGTCGCCGCACTATTCTTTTTGTTGACGAAGTTCACCGTTTCAACAAAAGCCAGCAGGATGCATTTCTGCCACATATTGAAGACGGCACCATCACTTTTATTGGCGCAACCACTGAAAACCCGTCGTTTGAGCTTAATTCGGCACTGCTTTCCCGTGCCCGTGTCTATCTGTTGAAATCCCTGAGTACAGAGGATATTGAGCAAGTACTAACTCAGGCGATGGAAGACAAAACCCGTGGCTATGGTGGTCAGGATATTGTTCTGCCAGATGAAACACGACGCGCCATTGCTGAACTGGTGAATGGCGACGCGCGCCGGGCGTTAAATACGCTGGAAATGATGGCGGATATGGCCGAAGTCGATGATAGCGGTAAGCGGGTCCTGAAGCCTGAATTACTGACCGAAATCGCCGGTGAACGTAGCGCCCGCTTTGATAACAAAGGCGATCGCTTTTACGATCTGATTTCCGCACTGCATAAGTCGGTACGTGGTAGCGCACCCGATGCGGCGCTGTACTGGTATGCGCGAATTATTACCGCTGGTGGCGATCCGTTATATGTCGCGCGTCGCTGTCTGGCGATTGCGTCTGAAGACGTCGGTAATGCCGATCCACGGGCGATGCAGGTGGCAATTGCGGCCTGGGATTGCTTTACTCGCGTTGGCCCGGCGGAAGGTGAACGCGCCATTGCTCAGGCGATTGTTTACCTGGCCTGCGCGCCAAAAAGCAACGCTGTCTACACTGCGTTTAAAGCCGCGCTGGCCGATGCTCGCGAACGCCCGGATTATGACGTGCCGGTTCATTTGCGTAATGCGCCGACGAAATTAATGAAGGAAATGGGCTACGGGCAGGAATATCGTTACGCTCATGATGAAGCAAACGCTTATGCTGCCGGTGAGGTTTACTTCCCGCCGGAAATAGCACAAACACGCTATTATTTCCCGACAAACAGGGGCCTTGAAGGCAAGATTGGCGAAAAGCTCGCCTGGCTGGCTGAACAGGATCAAAATAGCCCCATAAAACGCTACCGTTAA", - "dna_sequence_length": 1344, - "functions": [ - "recombination intermediate processing DNA-dependent ATPase" - ], - "id": "CDS_873", - "location": [ - [ - "NC_000913", - 937994, - "+", - 1344 - ] - ], - "md5": "f90cea30e07eaff8eb85518ff875600f", - "parent_gene": "", - "protein_md5": "4bdb9995bc0149f0b47c6f6b1c3e1b32", - "protein_translation": "MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR", - "protein_translation_length": 447, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0876" - ], - [ - "gene_synonym", - "serS" - ], - [ - "gene_synonym", - "GeneID:945506" - ], - [ - "gene_synonym", - "ECK0884" - ], - [ - "gene_synonym", - "b0893" - ], - [ - "gene_synonym", - "ASAP:ABE-0003038" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8L1" - ], - [ - "gene_synonym", - "EcoGene:EG10947" - ], - [ - "gene_synonym", - "NP_415413.1" - ], - [ - "gene_synonym", - "GI:16128860" - ] - ], - "dna_sequence": "ATGCTCGATCCCAATCTGCTGCGTAATGAGCCAGACGCAGTCGCTGAAAAACTGGCACGCCGGGGCTTTAAGCTGGATGTAGATAAGCTGGGCGCTCTTGAAGAGCGTCGTAAAGTATTGCAGGTCAAAACGGAAAACCTGCAAGCGGAGCGTAACTCCCGATCGAAATCCATTGGCCAGGCGAAAGCGCGCGGGGAAGATATCGAGCCTTTACGTCTGGAAGTGAACAAACTGGGCGAAGAGCTGGATGCAGCAAAAGCCGAGCTGGATGCTTTACAGGCTGAAATTCGCGATATCGCGCTGACCATCCCTAACCTGCCTGCAGATGAAGTGCCGGTAGGTAAAGACGAAAATGACAACGTTGAAGTCAGCCGCTGGGGTACCCCGCGTGAGTTTGACTTTGAAGTTCGTGACCACGTGACGCTGGGTGAAATGCACTCTGGCCTCGACTTTGCAGCTGCAGTTAAGCTGACTGGTTCCCGCTTTGTGGTAATGAAAGGGCAGATTGCTCGCATGCACCGCGCACTGTCGCAGTTTATGCTGGATCTGCATACCGAACAGCATGGCTACAGTGAGAACTATGTTCCGTACCTGGTTAACCAGGACACGCTGTACGGTACGGGTCAACTGCCGAAATTTGCTGGCGATCTGTTCCATACTCGTCCGCTGGAAGAAGAAGCAGACACCAGTAACTATGCGCTGATCCCAACGGCAGAAGTTCCGCTGACTAACCTGGTGCGCGGTGAAATCATCGATGAAGATGATCTGCCAATTAAGATGACCGCCCACACCCCATGCTTCCGTTCTGAAGCCGGTTCATATGGTCGTGACACCCGTGGTCTGATCCGTATGCACCAGTTCGACAAAGTTGAAATGGTGCAGATCGTGCGCCCAGAAGACTCAATGGCGGCGCTGGAAGAGATGACTGGTCATGCAGAAAAAGTCCTGCAGTTGCTGGGCCTGCCGTACCGTAAAATCATCCTTTGCACTGGCGACATGGGCTTTGGCGCTTGCAAAACTTACGACCTGGAAGTATGGATCCCGGCACAGAACACCTACCGTGAGATCTCTTCCTGCTCCAACGTTTGGGATTTCCAGGCACGTCGTATGCAGGCACGTTGCCGCAGCAAGTCGGACAAGAAAACCCGTCTGGTTCATACCCTGAACGGTTCTGGTCTGGCTGTTGGTCGTACGCTGGTTGCAGTAATGGAAAACTATCAGCAGGCTGATGGTCGTATTGAAGTACCAGAAGTTCTGCGTCCGTATATGAACGGACTGGAATATATTGGCTAA", - "dna_sequence_length": 1293, - "functions": [ - "seryl-tRNA synthetase" - ], - "id": "CDS_874", - "location": [ - [ - "NC_000913", - 939428, - "+", - 1293 - ] - ], - "md5": "67b02cbbef7fd89c8b84b9400e9d9cc3", - "parent_gene": "", - "protein_md5": "5428c38a6a43a1cd085e19ad69956708", - "protein_translation": "MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG", - "protein_translation_length": 430, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945508" - ], - [ - "gene_synonym", - "NP_415414.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P18775" - ], - [ - "gene_synonym", - "ECK0885" - ], - [ - "gene_synonym", - "ASAP:ABE-0003044" - ], - [ - "gene_synonym", - "EcoGene:EG10232" - ], - [ - "gene_synonym", - "b0894" - ], - [ - "gene_synonym", - "dmsA" - ], - [ - "gene_synonym", - "GI:90111183" - ], - [ - "gene_synonym", - "JW5118" - ] - ], - "dna_sequence": "ATGAAAACGAAAATCCCTGATGCGGTATTGGCTGCTGAGGTGAGTCGCCGTGGTTTGGTAAAAACGACAGCGATCGGCGGCCTGGCAATGGCCAGCAGCGCATTAACATTACCTTTTAGTCGGATTGCGCACGCTGTCGATAGCGCCATTCCAACAAAATCAGACGAAAAGGTTATCTGGAGCGCCTGTACAGTTAACTGTGGTAGTCGCTGCCCGCTACGTATGCACGTCGTGGACGGTGAAATCAAATATGTCGAAACGGACAATACCGGCGATGACAATTACGACGGCCTGCACCAGGTTCGCGCCTGCCTGCGTGGGCGTTCCATGCGTCGCCGTGTCTACAATCCGGACCGCCTGAAATATCCGATGAAACGAGTCGGGGCGCGCGGTGAAGGCAAATTCGAGCGCATTAGCTGGGAAGAAGCCTACGACATCATCGCGACCAATATGCAGCGCCTGATCAAAGAGTACGGCAACGAGTCTATCTATCTGAACTATGGCACCGGTACGCTGGGCGGCACCATGACCCGCTCCTGGCCGCCGGGAAATACCCTGGTCGCGCGGCTGATGAACTGCTGCGGCGGCTATCTGAACCATTACGGCGACTACTCCTCCGCGCAAATTGCGGAAGGTTTGAACTATACCTACGGCGGCTGGGCAGATGGCAACAGCCCGTCGGATATCGAAAACAGTAAGCTGGTAGTGCTGTTTGGTAATAACCCTGGCGAAACGCGAATGAGTGGCGGTGGGGTGACTTACTATCTTGAACAGGCACGCCAGAAATCTAATGCCCGCATGATCATCATCGATCCGCGCTATACCGACACCGGTGCCGGGCGCGAAGATGAGTGGATCCCTATTCGTCCGGGAACAGATGCCGCACTGGTTAACGGTCTGGCGTACGTCATGATCACTGAAAACCTGGTGGATCAGGCATTCCTCGATAAATATTGCGTTGGCTACGATGAGAAAACCCTGCCAGCCAGTGCGCCGAAAAATGGCCACTATAAAGCTTATATTCTGGGTGAAGGGCCAGATGGCGTGGCTAAAACGCCGGAATGGGCCTCGCAAATCACTGGTGTTCCGGCAGACAAAATCATCAAATTGGCTCGTGAAATCGGTAGTACCAAACCGGCGTTTATCAGCCAGGGATGGGGCCCGCAGCGTCACGCTAACGGTGAAATCGCAACCCGTGCTATCTCGATGCTGGCGATTCTGACCGGTAACGTTGGTATTAACGGAGGCAACAGCGGCGCGCGTGAAGGTTCATACAGCTTACCGTTTGTCCGTATGCCGACCTTGGAAAACCCGATCCAGACCAGCATTTCGATGTTTATGTGGACCGATGCCATTGAACGTGGCCCGGAAATGACGGCGCTGCGTGATGGTGTACGCGGGAAAGATAAGCTGGATGTGCCGATCAAAATGATCTGGAACTATGCCGGTAACTGCCTGATTAACCAGCATTCTGAAATCAACCGTACCCATGAAATCCTTCAGGATGATAAGAAGTGCGAGCTGATTGTGGTTATCGACTGCCACATGACCTCATCGGCGAAATATGCTGACATCCTGCTGCCTGACTGCACCGCTTCCGAACAGATGGACTTTGCGCTGGATGCATCCTGCGGGAATATGTCTTACGTGATTTTCAACGATCAGGTGATTAAACCGCGCTTTGAATGTAAGACCATCTATGAAATGACCAGCGAACTGGCAAAACGTCTTGGCGTTGAGCAACAGTTTACTGAAGGCCGTACCCAGGAAGAGTGGATGCGGCATCTGTATGCCCAGTCGCGGGAAGCGATTCCTGAACTGCCAACGTTTGAAGAGTTCCGCAAGCAGGGGATCTTTAAAAAGCGCGACCCACAAGGGCATCACGTTGCTTATAAAGCCTTCCGTGAAGATCCGCAGGCAAACCCACTGACTACGCCATCGGGCAAAATTGAGATTTATTCGCAGGCGCTGGCTGACATTGCCGCTACCTGGGAATTGCCTGAAGGCGATGTGATCGATCCACTGCCGATCTACACGCCGGGCTTTGAAAGTTATCAGGATCCGCTGAACAAACAGTATCCGCTGCAGCTTACAGGTTTCCACTATAAATCTCGCGTTCACTCAACTTACGGCAACGTTGATGTGCTGAAAGCGGCTTGCCGTCAGGAAATGTGGATCAACCCGCTTGATGCCCAAAAACGCGGTATCCACAACGGCGATAAAGTCAGGATCTTTAACGATCGTGGTGAGGTTCATATTGAGGCGAAAGTGACGCCACGAATGATGCCGGGTGTGGTCGCACTGGGTGAAGGTGCCTGGTATGACCCGGATGCAAAACGTGTCGATAAGGGTGGTTGTATTAACGTACTGACCACTCAACGTCCGTCTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAA", - "dna_sequence_length": 2445, - "functions": [ - "dimethyl sulfoxide reductase, anaerobic, subunit A" - ], - "id": "CDS_875", - "location": [ - [ - "NC_000913", - 940959, - "+", - 2445 - ] - ], - "md5": "e19d5c7735b43753e83b068f72d087c3", - "parent_gene": "", - "protein_md5": "68b0dd089536b4ce2404d75deec8bb41", - "protein_translation": "MKTKIPDAVLAAEVSRRGLVKTTAIGGLAMASSALTLPFSRIAHAVDSAIPTKSDEKVIWSACTVNCGSRCPLRMHVVDGEIKYVETDNTGDDNYDGLHQVRACLRGRSMRRRVYNPDRLKYPMKRVGARGEGKFERISWEEAYDIIATNMQRLIKEYGNESIYLNYGTGTLGGTMTRSWPPGNTLVARLMNCCGGYLNHYGDYSSAQIAEGLNYTYGGWADGNSPSDIENSKLVVLFGNNPGETRMSGGGVTYYLEQARQKSNARMIIIDPRYTDTGAGREDEWIPIRPGTDAALVNGLAYVMITENLVDQAFLDKYCVGYDEKTLPASAPKNGHYKAYILGEGPDGVAKTPEWASQITGVPADKIIKLAREIGSTKPAFISQGWGPQRHANGEIATRAISMLAILTGNVGINGGNSGAREGSYSLPFVRMPTLENPIQTSISMFMWTDAIERGPEMTALRDGVRGKDKLDVPIKMIWNYAGNCLINQHSEINRTHEILQDDKKCELIVVIDCHMTSSAKYADILLPDCTASEQMDFALDASCGNMSYVIFNDQVIKPRFECKTIYEMTSELAKRLGVEQQFTEGRTQEEWMRHLYAQSREAIPELPTFEEFRKQGIFKKRDPQGHHVAYKAFREDPQANPLTTPSGKIEIYSQALADIAATWELPEGDVIDPLPIYTPGFESYQDPLNKQYPLQLTGFHYKSRVHSTYGNVDVLKAACRQEMWINPLDAQKRGIHNGDKVRIFNDRGEVHIEAKVTPRMMPGVVALGEGAWYDPDAKRVDKGGCINVLTTQRPSPLAKGNPSHTNLVQVEKV", - "protein_translation_length": 814, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P18776" - ], - [ - "gene_synonym", - "JW0878" - ], - [ - "gene_synonym", - "NP_415415.1" - ], - [ - "gene_synonym", - "ECK0886" - ], - [ - "gene_synonym", - "GeneID:945507" - ], - [ - "gene_synonym", - "EcoGene:EG10233" - ], - [ - "gene_synonym", - "b0895" - ], - [ - "gene_synonym", - "dmsB" - ], - [ - "gene_synonym", - "GI:16128862" - ], - [ - "gene_synonym", - "ASAP:ABE-0003046" - ] - ], - "dna_sequence": "ATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCAAAACCTGCGAGCTGGCCTGTAAAGACTACAAAGATTTGACGCCAGAAGTCAGCTTCCGCCGCATTTATGAATATGCTGGCGGCGACTGGCAGGAAGATAACGGTGTCTGGCACCAGAACGTGTTTGCCTACTATCTGTCGATTTCATGTAACCACTGCGAAGATCCGGCTTGTACTAAAGTCTGCCCGAGCGGTGCGATGCATAAACGTGAAGATGGTTTTGTTGTGGTCGATGAAGATGTGTGCATTGGCTGCCGCTACTGCCATATGGCTTGCCCGTATGGCGCACCGCAATATAACGAAACGAAAGGCCATATGACCAAATGCGATGGTTGTTATGACCGTGTTGCGGAGGGTAAAAAGCCGATCTGTGTTGAATCTTGTCCGCTGCGGGCGCTGGATTTCGGCCCTATCGACGAGCTGCGTAAAAAACATGGCGATCTGGCGGCCGTTGCGCCGTTGCCGCGAGCTCACTTTACCAAACCGAATATTGTGATCAAACCCAATGCCAATAGCCGCCCGACCGGGGATACCACTGGCTATCTGGCAAACCCGAAGGAGGTGTGA", - "dna_sequence_length": 618, - "functions": [ - "dimethyl sulfoxide reductase, anaerobic, subunit B" - ], - "id": "CDS_876", - "location": [ - [ - "NC_000913", - 943414, - "+", - 618 - ] - ], - "md5": "8713d0779705be8bc458384860340ca9", - "parent_gene": "", - "protein_md5": "f64233bd1c609e5d66549657a48d9fe4", - "protein_translation": "MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAGGDWQEDNGVWHQNVFAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNETKGHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDELRKKHGDLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPKEV", - "protein_translation_length": 205, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945502" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P18777" - ], - [ - "gene_synonym", - "JW0879" - ], - [ - "gene_synonym", - "ECK0887" - ], - [ - "gene_synonym", - "ASAP:ABE-0003048" - ], - [ - "gene_synonym", - "NP_415416.1" - ], - [ - "gene_synonym", - "b0896" - ], - [ - "gene_synonym", - "dmsC" - ], - [ - "gene_synonym", - "GI:16128863" - ], - [ - "gene_synonym", - "EcoGene:EG10234" - ] - ], - "dna_sequence": "ATGGGAAGTGGATGGCATGAATGGCCGCTGATGATCTTCACGGTCTTCGGGCAATGTGTAGCAGGTGGTTTTATCGTTCTGGCTTTGGCGCTGCTCAAAGGCGACCTGCGAGCAGAAGCCCAGCAGCGTGTTATCGCCTGCATGTTTGGTTTATGGGTGCTGATGGGCATTGGCTTTATCGCCTCTATGCTCCATCTTGGTTCACCAATGCGCGCTTTTAACTCGCTCAACCGGGTAGGGGCTTCAGCACTCAGTAACGAAATCGCCAGCGGTTCGATCTTTTTTGCCGTAGGCGGCATCGGCTGGTTGCTGGCAATGCTGAAAAAGCTGTCACCGGCATTGCGTACGCTGTGGCTGATAGTGACGATGGTTCTTGGCGTCATCTTTGTCTGGATGATGGTGCGTGTGTATAACAGCATTGATACCGTTCCGACCTGGTACAGCATCTGGACGCCGATGGGCTTCTTCCTGACGATGTTTATGGGCGGCCCGTTACTGGGTTACCTGTTGTTGAGTCTGGCTGGCGTCGATGGCTGGGCGATGCGTCTGCTGCCAGCAATTTCTGTACTGGCACTGGTAGTGAGTGGCGTGGTGTCAGTGATGCAGGGCGCAGAGCTGGCGACTATTCATAGTTCTGTGCAGCAGGCCGCAGCGCTGGTGCCGGACTATGGTGCGCTGATGTCCTGGCGGATCGTGCTTTTGGCCGTTGCCCTGTGCTTGTGGATTGCACCACAGCTAAAAGGTTATCAGCCTGCGGTTCCGCTACTTTCTGTATCATTCATTCTGCTTCTGGCAGGGGAATTAATCGGTCGCGGCGTATTCTATGGTTTGCATATGACCGTGGGGATGGCCGTCGCAAGCTAA", - "dna_sequence_length": 864, - "functions": [ - "dimethyl sulfoxide reductase, anaerobic, subunit C" - ], - "id": "CDS_877", - "location": [ - [ - "NC_000913", - 944033, - "+", - 864 - ] - ], - "md5": "19e0b4fd7c899f96a557d34ddd305d39", - "parent_gene": "", - "protein_md5": "0c42678a48843a5c27d22f9dd34c61f5", - "protein_translation": "MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRVIACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGWLLAMLKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMFMGGPLLGYLLLSLAGVDGWAMRLLPAISVLALVVSGVVSVMQGAELATIHSSVQQAAALVPDYGALMSWRIVLLAVALCLWIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYGLHMTVGMAVAS", - "protein_translation_length": 287, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0888" - ], - [ - "gene_synonym", - "GeneID:945512" - ], - [ - "gene_synonym", - "ycaC" - ], - [ - "gene_synonym", - "JW0880" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21367" - ], - [ - "gene_synonym", - "EcoGene:EG11241" - ], - [ - "gene_synonym", - "ASAP:ABE-0003050" - ], - [ - "gene_synonym", - "b0897" - ], - [ - "gene_synonym", - "GI:16128864" - ], - [ - "gene_synonym", - "NP_415417.1" - ] - ], - "dna_sequence": "ATGACCAAACCGTATGTTCGTCTTGATAAAAATGATGCTGCCGTTTTGCTTGTTGATCACCAGGCTGGTTTACTTTCCCTTGTACGGGATATCGAACCCGATAAGTTTAAAAATAACGTGCTGGCGCTGGGTGACCTGGCTAAGTATTTCAACTTACCAACTATTCTTACCACCAGTTTTGAAACCGGTCCTAACGGCCCATTAGTTCCAGAACTGAAAGCACAATTCCCCGATACACCTTACATTGCTCGCCCGGGAAATATTAACGCCTGGGATAACGAAGATTTTGTAAAAGCTGTCAAAGCGACAGGTAAAAAACAGTTAATTATTGCCGGTGTGGTAACCGAAGTTTGCGTGGCATTCCCGGCGCTTTCAGCCATTGAAGAAGGGTTTGACGTCTTTGTCGTGACTGACGCGTCAGGGACCTTTAATGAAATTACCCGGCATTCGGCATGGGATCGCTTGTCGCAAGCTGGTGCGCAATTGATGACATGGTTCGGCGTGGCGTGCGAGCTGCATCGCGACTGGCGTAATGATATTGAAGGACTGGCGACGTTGTTCTCTAACCACATTCCTGATTATCGTAATTTGATGACCAGTTATGACACGTTAACGAAGCAGAAATAA", - "dna_sequence_length": 627, - "functions": [ - "putative isochorismatase family hydrolase" - ], - "id": "CDS_878", - "location": [ - [ - "NC_000913", - 945557, - "-", - 627 - ] - ], - "md5": "e218a36de24d7f8fbd59547a7212d802", - "parent_gene": "", - "protein_md5": "6eaa3a76c2e7f3668a7434cd0d3f6a23", - "protein_translation": "MTKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSFETGPNGPLVPELKAQFPDTPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRLSQAGAQLMTWFGVACELHRDWRNDIEGLATLFSNHIPDYRNLMTSYDTLTKQK", - "protein_translation_length": 208, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0889" - ], - [ - "gene_synonym", - "ycaD" - ], - [ - "gene_synonym", - "GeneID:945515" - ], - [ - "gene_synonym", - "JW0881" - ], - [ - "gene_synonym", - "ASAP:ABE-0003056" - ], - [ - "gene_synonym", - "NP_415418.1" - ], - [ - "gene_synonym", - "EcoGene:EG11242" - ], - [ - "gene_synonym", - "b0898" - ], - [ - "gene_synonym", - "GI:16128865" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21503" - ] - ], - "dna_sequence": "ATGTCCACGTATACCCAGCCTGTCATGCTTTTGCTGTCTGGCCTGCTTTTGTTGACTCTGGCGATTGCGGTGTTAAATACACTCGTGCCGCTTTGGCTCGCCCAGGAACACATGTCCACATGGCAGGTAGGCGTTGTCAGCTCATCCTATTTTACCGGCAACCTTGTCGGTACATTGCTGACAGGGTATGTCATTAAGCGCATTGGCTTTAACCGCAGCTATTATCTGGCCTCCTTCATTTTTGCCGCTGGCTGTGCCGGCCTTGGCCTGATGATTGGATTCTGGAGCTGGTTGGCTTGGCGTTTTGTCGCGGGCGTCGGCTGTGCCATGATTTGGGTGGTTGTTGAGAGCGCGCTGATGTGCAGTGGGACGTCACGTAACCGTGGGCGTTTGCTTGCTGCGTATATGATGGTTTATTACGTGGGAACGTTTTTAGGCCAGTTACTGGTCAGCAAAGTTTCAACCGAGCTGATGTCCGTATTGCCGTGGGTTACAGGTTTGACGTTGGCAGGGATCTTACCGCTGTTGTTTACGCGTGTGCTGAATCAGCAGGCTGAAAACCATGATTCGACGTCAATTACGTCAATGCTAAAACTCCGTCAGGCGCGGCTTGGCGTGAATGGCTGCATTATCTCAGGAATCGTTCTGGGATCTCTATATGGCCTGATGCCGCTGTACCTCAATCACAAAGGGGTGAGCAATGCCAGCATTGGTTTCTGGATGGCGGTACTGGTCAGTGCGGGTATCCTTGGACAATGGCCGATTGGACGTCTGGCGGATAAGTTTGGTCGACTGCTGGTGTTGCGTGTTCAGGTCTTTGTCGTCATTCTCGGCAGTATCGCGATGCTTAGCCAGGCGGCGATGGCCCCAGCGTTATTCATCCTCGGTGCCGCTGGCTTTACGCTATATCCGGTGGCGATGGCATGGGCTTGCGAGAAAGTTGAACATCATCAACTGGTGGCGATGAACCAGGCCTTACTGTTGAGCTATACTGTGGGAAGTCTGCTTGGCCCGTCATTTACCGCTATGCTAATGCAGAATTTCTCCGATAATTTATTGTTTATCATGATCGCCAGCGTATCGTTTATCTATTTGCTGATGCTGCTGCGCAACGCCGGTCATACGCCGAAACCCGTTGCTCACGTGTAA", 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"gene_synonym", - "ECK0890" - ], - [ - "gene_synonym", - "NP_415419.2" - ], - [ - "gene_synonym", - "b0899" - ], - [ - "gene_synonym", - "GI:90111184" - ], - [ - "gene_synonym", - "ASAP:ABE-0003058" - ], - [ - "gene_synonym", - "JW5119" - ] - ], - "dna_sequence": "ATGGCTGGGAATGTTCAGGAAAAACAGTTGCGATGGTACAACATTGCGCTGATGTCTTTTATCACTGTCTGGGGTTTTGGCAACGTTGTTAATAACTATGCCAACCAGGGGCTGGTGGTTGTTTTTTCATGGGTGTTTATCTTTGCACTCTATTTCACACCTTATGCGCTAATTGTTGGTCAGTTAGGCTCGACCTTCAAAGATGGGAAGGGCGGGGTCAGTACCTGGATTAAACACACGATGGGACCCGGACTGGCTTATCTCGCCGCGTGGACCTACTGGGTGGTGCATATTCCCTATCTGGCACAAAAACCCCAGGCAATTCTGATTGCGCTCGGTTGGGCGATGAAAGGCGACGGTTCGCTAATCAAAGAATATTCAGTCGTAGCGTTACAGGGGTTAACGCTGGTGCTGTTTATCTTCTTTATGTGGGTTGCTTCACGCGGTATGAAATCGCTGAAAATCGTCGGTTCTGTGGCAGGGATTGCTATGTTTGTTATGTCACTCCTGTATGTGGCGATGGCGGTAACCGCGCCTGCAATTACTGAAGTGCATATTGCGACCACAAACATTACCTGGGAAACGTTCATTCCTCATATCGACTTTACCTACATTACCACTATTTCAATGCTGGTTTTCGCGGTTGGCGGAGCAGAGAAGATTTCTCCTTACGTTAATCAAACGCGCAACCCAGGAAAAGAATTTCCAAAAGGGATGTTATGCCTGGCGGTGATGGTTGCGGTTTGTGCCATTCTGGGCTCGCTGGCGATGGGGATGATGTTTGATTCGCGTAATATCCCGGATGACTTAATGACCAACGGTCAGTATTACGCCTTTCAGAAGCTGGGCGAGTATTACAACATGGGTAATACTTTAATGGTGATTTACGCCATTGCGAATACCCTGGGACAAGTAGCGGCGCTGGTATTCTCGATTGATGCCCCGCTTAAAGTGCTATTAGGTGATGCTGACAGCAAATATATTCCAGCCAGTTTATGTCGTACCAACGCTTCTGGTACGCCCGTTAATGGCTATTTTCTGACCCTGGTACTGGTGGCGATTCTGATTATGCTGCCGACTCTCGGCATTGGTGATATGAACAATCTCTATAAATGGCTGTTGAACCTTAATTCGGTAGTGATGCCGCTGCGTTATTTATGGGTATTTGTTGCATTTATTGCAGTCGTTCGCTTGGCGCAGAAATATAAACCAGAATATGTCTTTATTCGTAATAAGCCTCTGGCAATGACCGTCGGGATTTGGTGTTTTGCCTTTACCGCCTTTGCCTGTTTGACGGGGATCTTCCCGAAAATGGAAGCCTTCACTGCAGAGTGGACCTTCCAGTTGGCGCTGAATGTTGCAACGCCGTTTGTGCTGGTAGGATTAGGACTGATATTCCCGCTGCTGGCGCGTAAAGCGAATAGTAAATAA", - "dna_sequence_length": 1431, - "functions": [ - "putative transporter" - ], - "id": "CDS_880", - "location": [ - [ - "NC_000913", - 947229, - "+", - 1431 - ] - ], - "md5": "308a1e2affb70f1497ca8b11f2b331d8", - "parent_gene": "", - "protein_md5": "e3df422ab6879a8f35675aa92ed46de7", - "protein_translation": "MAGNVQEKQLRWYNIALMSFITVWGFGNVVNNYANQGLVVVFSWVFIFALYFTPYALIVGQLGSTFKDGKGGVSTWIKHTMGPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWAMKGDGSLIKEYSVVALQGLTLVLFIFFMWVASRGMKSLKIVGSVAGIAMFVMSLLYVAMAVTAPAITEVHIATTNITWETFIPHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLCLAVMVAVCAILGSLAMGMMFDSRNIPDDLMTNGQYYAFQKLGEYYNMGNTLMVIYAIANTLGQVAALVFSIDAPLKVLLGDADSKYIPASLCRTNASGTPVNGYFLTLVLVAILIMLPTLGIGDMNNLYKWLLNLNSVVMPLRYLWVFVAFIAVVRLAQKYKPEYVFIRNKPLAMTVGIWCFAFTAFACLTGIFPKMEAFTAEWTFQLALNVATPFVLVGLGLIFPLLARKANSK", - "protein_translation_length": 476, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ycaN" - ], - [ - "gene_synonym", - "GeneID:945523" - ], - [ - "gene_synonym", - "EcoGene:EG13698" - ], - [ - "gene_synonym", - "ECK0891" - ], - [ - "gene_synonym", - "JW0883" - ], - [ - "gene_synonym", - "NP_415420.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003060" - ], - [ - "gene_synonym", - "b0900" - ], - [ - "gene_synonym", - "GI:16128867" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75836" - ] - ], - "dna_sequence": "ATGCGGATGAATATGTCTGACTTTGCCACTTTCTTTGCCGTGGCCCGTAATCAAAGCTTTCGTGCAGCGGGCGATGAGTTAGGCTTATCCTCGTCCGCCATTAGCCATAGTATTAAAACACTGGAACAACGTCTTAAAATTCGCTTATTCAATCGGACAACCCGAAGCGTATCGTTAACGGAAGCGGGTTCTAATCTCTATGAACGATTGCGCCCAGCTTTCGACGAAATTCAGATCATGTTAGATGAGATGAATGATTTTCGTCTGACACCGACAGGAACGCTCAAAATCAATGCCGCCCGGGTAGCTGCACGTATATTTTTAATGTCTTTACTGGTTGGTTTCACACGTGAATATCCTGATATTAAAGTCGAGCTCACAACTGACGACTCTCTTGTCGATATCGTCCAACAGGGCTTTGACGCTGGCGTTCGACTTAGTTGCATCGTCGAAAAAGATATGATCAGCGTGGCGATCGGCCCGCCAGTGAAATTATGTGTAGCAGCAACGCCAGAGTACTTTGCAAGATATGGCAAACCCCGCCATCCTCATGATCTGCTTAATCATCAATGTGTTGTTTTTCGTTATCCCAGCGGCAAACCTTTCCACTGGCAATTTGCAAAGGAGCTGGAAATTGCTGTCGCAGGAAATATCATTCTGGATGATGTTGATGCTGAACTGGAGGCCGTTTTGATGGGTGCTGGTATCGGGTATCTGCTCTATGAACAGATCAAGGAGTACCTTGATACTGGTCGTTTAGAATGTGTACTGGAAGACTGGAGCACAGAGCGTCCAGGCTTCCAGATCTATTATCCAAACCGCCAGTATATGTCCTGCGGCTTGCGCGCATTTCTCGATTATGTAAAAACGGGTCAGATCTGCCAGAGTCAGCGTCACCGACCACAATAA", - "dna_sequence_length": 909, - "functions": [ - "LysR family putative transcriptional regulator" - ], - "id": "CDS_881", - "location": [ - [ - "NC_000913", - 949568, - "-", - 909 - ] - ], - "md5": "3aa8ad6cad0d58ffc44785e0ef51441d", - "parent_gene": "", - "protein_md5": "357aced78900dc6ca3132390a7ae1e35", - "protein_translation": "MRMNMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQRLKIRLFNRTTRSVSLTEAGSNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINAARVAARIFLMSLLVGFTREYPDIKVELTTDDSLVDIVQQGFDAGVRLSCIVEKDMISVAIGPPVKLCVAATPEYFARYGKPRHPHDLLNHQCVVFRYPSGKPFHWQFAKELEIAVAGNIILDDVDAELEAVLMGAGIGYLLYEQIKEYLDTGRLECVLEDWSTERPGFQIYYPNRQYMSCGLRAFLDYVKTGQICQSQRHRPQ", - "protein_translation_length": 302, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945520" - ], - [ - "gene_synonym", - "b0901" - ], - [ - "gene_synonym", - "ycaK" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P43340" - ], - [ - "gene_synonym", - "ECK0892" - ], - [ - "gene_synonym", - "JW0884" - ], - [ - "gene_synonym", - "NP_415421.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003065" - ], - [ - "gene_synonym", - "GI:16128868" - ], - [ - "gene_synonym", - "EcoGene:EG12702" - ] - ], - "dna_sequence": "ATGCAGTCTGAACGTATTTATTTGGTATGGGCCCATCCTCGTCATGATTCATTGACCGCACATATTGCTGATGCGATCCATCAGCGGGCAATGGAGCGGAAAATACAGGTGACGGAACTCGATTTATATCGGCGTAATTTCAACCCAGTGATGACGCCGGAAGATGAACCAGACTGGAAGAATATGGATAAACGTTATTCTCCAGAGGTTCATCAGCTTTATTCAGAGCTGCTTGAACATGACACGTTAGTGGTGGTTTTTCCTCTCTGGTGGTACAGCTTCCCGGCAATGCTAAAAGGATATATTGACAGAGTATGGAATAATGGGCTGGCTTATGGAGATGGGCACAAATTACCATTCAATAAAGTTCGTTGGGTGGCGCTGGTTGGAGGAGACAAAGAATCATTTGTCCAGATGGGCTGGGAAAAAAATATAAGCGATTATTTAAAAAATATGTGCAGTTATCTTGGTATTGAAGATGCCGATGTCACTTTCTTGTGTAATACAGTGGTATTCGATGGGGAAGAACTTCACGCGAGCTATTATCAGTCGTTATTATCTCAGGTACGGGATATGGTAGATGCACTATAA", - "dna_sequence_length": 591, - "functions": [ - "putative NAD(P)H-dependent oxidoreductase" - ], - "id": "CDS_882", - "location": [ - [ - "NC_000913", - 949668, - "+", - 591 - ] - ], - "md5": "5170d5117701f013094e4ed61e77ac9f", - "parent_gene": "", - "protein_md5": "39abe98e4946779c8b765fa528e44006", - "protein_translation": "MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYRRNFNPVMTPEDEPDWKNMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYIDRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIEDADVTFLCNTVVFDGEELHASYYQSLLSQVRDMVDAL", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415422.1" - ], - [ - "gene_synonym", - "ECK0893" - ], - [ - "gene_synonym", - "JW0885" - ], - [ - "gene_synonym", - "GeneID:945517" - ], - [ - "gene_synonym", - "pflA" - ], - [ - "gene_synonym", - "b0902" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9N4" - ], - [ - "gene_synonym", - "GI:16128869" - ], - [ - "gene_synonym", - "act" - ], - [ - "gene_synonym", - "EcoGene:EG10028" - ], - [ - "gene_synonym", - "ASAP:ABE-0003068" - ] - ], - "dna_sequence": "ATGTCAGTTATTGGTCGCATTCACTCCTTTGAATCCTGTGGAACCGTAGACGGCCCAGGTATTCGCTTTATCACCTTTTTCCAGGGCTGCCTGATGCGCTGCCTGTATTGTCATAACCGCGACACCTGGGACACGCATGGCGGTAAAGAAGTTACCGTTGAAGATTTGATGAAGGAAGTGGTGACCTATCGCCACTTTATGAACGCTTCCGGCGGCGGCGTTACCGCATCCGGCGGTGAAGCAATCCTGCAAGCTGAGTTTGTTCGTGACTGGTTCCGCGCCTGCAAAAAAGAAGGCATTCATACCTGTCTGGACACCAACGGTTTTGTTCGTCGTTACGATCCGGTGATTGATGAACTGCTGGAAGTAACCGACCTGGTAATGCTCGATCTCAAACAGATGAACGACGAGATCCACCAAAATCTGGTTGGAGTTTCCAACCACCGCACGCTGGAGTTCGCTAAATATCTGGCGAACAAAAATGTGAAGGTGTGGATCCGCTACGTTGTTGTCCCAGGCTGGTCTGACGATGACGATTCAGCGCATCGCCTCGGTGAATTTACCCGTGATATGGGCAACGTTGAGAAAATCGAGCTTCTCCCCTACCACGAGCTGGGCAAACACAAATGGGTGGCAATGGGTGAAGAGTACAAACTCGACGGTGTTAAACCACCGAAGAAAGAGACCATGGAACGCGTGAAAGGCATTCTTGAGCAGTACGGTCATAAGGTAATGTTCTAA", - "dna_sequence_length": 741, - "functions": [ - "pyruvate formate-lyase 1-activating enzyme", - "[formate-C-acetyltransferase 1]-activating enzyme", - "PFL activase" - ], - "id": "CDS_883", - "location": [ - [ - "NC_000913", - 951080, - "-", - 741 - ] - ], - "md5": "1ed5917b1dc772f9371200d53d87a2fa", - "parent_gene": "", - "protein_md5": "060a51c91c15fb6764d5ea2d7f7ffcc4", - "protein_translation": "MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYGHKVMF", - "protein_translation_length": 246, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415423.1" - ], - [ - "gene_synonym", - "JW0886" - ], - [ - "gene_synonym", - "pflB" - ], - [ - "gene_synonym", - "pfl" - ], - [ - "gene_synonym", - "ECK0894" - ], - [ - "gene_synonym", - "ASAP:ABE-0003071" - ], - [ - "gene_synonym", - "b0903" - ], - [ - "gene_synonym", - "EcoGene:EG10701" - ], - [ - "gene_synonym", - "GeneID:945514" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09373" - ], - [ - "gene_synonym", - "GI:16128870" - ] - ], - "dna_sequence": "ATGTCCGAGCTTAATGAAAAGTTAGCCACAGCCTGGGAAGGTTTTACCAAAGGTGACTGGCAGAATGAAGTAAACGTCCGTGACTTCATTCAGAAAAACTACACTCCGTACGAGGGTGACGAGTCCTTCCTGGCTGGCGCTACTGAAGCGACCACCACCCTGTGGGACAAAGTAATGGAAGGCGTTAAACTGGAAAACCGCACTCACGCGCCAGTTGACTTTGACACCGCTGTTGCTTCCACCATCACCTCTCACGACGCTGGCTACATCAACAAGCAGCTTGAGAAAATCGTTGGTCTGCAGACTGAAGCTCCGCTGAAACGTGCTCTTATCCCGTTCGGTGGTATCAAAATGATCGAAGGTTCCTGCAAAGCGTACAACCGCGAACTGGATCCGATGATCAAAAAAATCTTCACTGAATACCGTAAAACTCACAACCAGGGCGTGTTCGACGTTTACACTCCGGACATCCTGCGTTGCCGTAAATCTGGTGTTCTGACCGGTCTGCCAGATGCATATGGCCGTGGCCGTATCATCGGTGACTACCGTCGCGTTGCGCTGTACGGTATCGACTACCTGATGAAAGACAAACTGGCACAGTTCACTTCTCTGCAGGCTGATCTGGAAAACGGCGTAAACCTGGAACAGACTATCCGTCTGCGCGAAGAAATCGCTGAACAGCACCGCGCTCTGGGTCAGATGAAAGAAATGGCTGCGAAATACGGCTACGACATCTCTGGTCCGGCTACCAACGCTCAGGAAGCTATCCAGTGGACTTACTTCGGCTACCTGGCTGCTGTTAAGTCTCAGAACGGTGCTGCAATGTCCTTCGGTCGTACCTCCACCTTCCTGGATGTGTACATCGAACGTGACCTGAAAGCTGGCAAGATCACCGAACAAGAAGCGCAGGAAATGGTTGACCACCTGGTCATGAAACTGCGTATGGTTCGCTTCCTGCGTACTCCGGAATACGATGAACTGTTCTCTGGCGACCCGATCTGGGCAACCGAATCTATCGGTGGTATGGGCCTCGACGGTCGTACCCTGGTTACCAAAAACAGCTTCCGTTTCCTGAACACCCTGTACACCATGGGTCCGTCTCCGGAACCGAACATGACCATTCTGTGGTCTGAAAAACTGCCGCTGAACTTCAAGAAATTCGCCGCTAAAGTGTCCATCGACACCTCTTCTCTGCAGTATGAGAACGATGACCTGATGCGTCCGGACTTCAACAACGATGACTACGCTATTGCTTGCTGCGTAAGCCCGATGATCGTTGGTAAACAAATGCAGTTCTTCGGTGCGCGTGCAAACCTGGCGAAAACCATGCTGTACGCAATCAACGGCGGCGTTGACGAAAAACTGAAAATGCAGGTTGGTCCGAAGTCTGAACCGATCAAAGGCGATGTCCTGAACTATGATGAAGTGATGGAGCGCATGGATCACTTCATGGACTGGCTGGCTAAACAGTACATCACTGCACTGAACATCATCCACTACATGCACGACAAGTACAGCTACGAAGCCTCTCTGATGGCGCTGCACGACCGTGACGTTATCCGCACCATGGCGTGTGGTATCGCTGGTCTGTCCGTTGCTGCTGACTCCCTGTCTGCAATCAAATATGCGAAAGTTAAACCGATTCGTGACGAAGACGGTCTGGCTATCGACTTCGAAATCGAAGGCGAATACCCGCAGTTTGGTAACAATGATCCGCGTGTAGATGACCTGGCTGTTGACCTGGTAGAACGTTTCATGAAGAAAATTCAGAAACTGCACACCTACCGTGACGCTATCCCGACTCAGTCTGTTCTGACCATCACTTCTAACGTTGTGTATGGTAAGAAAACGGGTAACACCCCAGACGGTCGTCGTGCTGGCGCGCCGTTCGGACCGGGTGCTAACCCGATGCACGGTCGTGACCAGAAAGGTGCAGTAGCCTCTCTGACTTCCGTTGCTAAACTGCCGTTTGCTTACGCTAAAGATGGTATCTCCTACACCTTCTCTATCGTTCCGAACGCACTGGGTAAAGACGACGAAGTTCGTAAGACCAACCTGGCTGGTCTGATGGATGGTTACTTCCACCACGAAGCATCCATCGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCTGGCTACGCAGTACGTTTCAACTCGCTGACTAAAGAACAGCAGCAGGACGTTATTACTCGTACCTTCACTCAATCTATGTAA", 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"MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFLAGATEATTTLWDKVMEGVKLENRTHAPVDFDTAVASTITSHDAGYINKQLEKIVGLQTEAPLKRALIPFGGIKMIEGSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRCRKSGVLTGLPDAYGRGRIIGDYRRVALYGIDYLMKDKLAQFTSLQADLENGVNLEQTIRLREEIAEQHRALGQMKEMAAKYGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMSFGRTSTFLDVYIERDLKAGKITEQEAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIWATESIGGMGLDGRTLVTKNSFRFLNTLYTMGPSPEPNMTILWSEKLPLNFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGGVDEKLKMQVGPKSEPIKGDVLNYDEVMERMDHFMDWLAKQYITALNIIHYMHDKYSYEASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAIDFEIEGEYPQFGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIPTQSVLTITSNVVYGKKTGNTPDGRRAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVRKTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQSM", - "protein_translation_length": 760, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0887" - ], - [ - "gene_synonym", - "ycaE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC23" - ], - [ - "gene_synonym", - "ECK0895" - ], - [ - "gene_synonym", - "b0904" - ], - [ - "gene_synonym", - "ASAP:ABE-0003073" - ], - [ - "gene_synonym", - "NP_415424.1" - ], - [ - "gene_synonym", - "focA" - ], - [ - "gene_synonym", - "EcoGene:EG11258" - ], - [ - "gene_synonym", - "GeneID:945513" - ], - [ - "gene_synonym", - "GI:16128871" - ] - ], - "dna_sequence": "GTGAAAGCTGACAACCCTTTTGATCTTTTACTTCCTGCTGCAATGGCCAAAGTGGCCGAAGAGGCGGGTGTCTATAAAGCAACGAAACATCCGCTTAAGACTTTCTATCTGGCGATTACCGCCGGTGTTTTCATCTCAATCGCATTCGTCTTCTATATCACAGCAACCACTGGCACAGGCACAATGCCCTTCGGCATGGCAAAACTGGTTGGCGGCATTTGCTTCTCTCTGGGGCTGATTCTTTGTGTTGTCTGCGGAGCCGATCTCTTTACTTCCACCGTGTTGATTGTTGTTGCTAAGGCGAGTGGGCGCATCACCTGGGGTCAGTTGGCGAAAAACTGGCTAAATGTCTATTTTGGCAACCTGGTCGGCGCACTGCTGTTTGTACTTTTAATGTGGCTTTCCGGCGAGTATATGACCGCAAATGGTCAATGGGGACTAAACGTCCTACAAACCGCCGACCACAAAGTGCACCATACTTTTATTGAGGCCGTCTGTCTTGGTATCCTGGCAAACCTGATGGTATGTCTGGCAGTATGGATGAGTTATTCTGGCCGCAGCCTGATGGACAAAGCGTTCATTATGGTGCTGCCGGTCGCGATGTTTGTTGCCAGCGGTTTTGAGCACAGTATCGCAAACATGTTTATGATCCCGATGGGTATTGTAATCCGCGACTTCGCATCCCCGGAATTTTGGACCGCAGTCGGTTCTGCACCGGAAAATTTTTCTCACCTGACCGTGATGAATTTCATCACTGATAACCTGATTCCGGTTACGATCGGCAACATTATCGGTGGTGGTTTGTTGGTTGGGTTGACATACTGGGTCATTTACCTGCGTGAAAACGACCACCATTAA", - "dna_sequence_length": 858, - "functions": [ - "formate channel" - ], - "id": "CDS_885", - "location": [ - [ - "NC_000913", - 954466, - "-", - 858 - ] - ], - "md5": "41a0da1fa3bd16289cabff1135b7ec1b", - "parent_gene": "", - "protein_md5": "7aa777189b5ba6c32d0c25be72bd0662", - "protein_translation": "MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVFISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLRENDHH", - "protein_translation_length": 285, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ycaO" - ], - [ - "gene_synonym", - "GeneID:945509" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75838" - ], - [ - "gene_synonym", - "JW0888" - ], - [ - "gene_synonym", - "EcoGene:EG13699" - ], - [ - "gene_synonym", - "NP_415425.4" - ], - [ - "gene_synonym", - "ECK0896" - ], - [ - "gene_synonym", - "b0905" - ], - [ - "gene_synonym", - "GI:90111185" - ], - [ - "gene_synonym", - "ASAP:ABE-0003081" - ] - ], - "dna_sequence": "ATGACGCAAACATTTATCCCCGGCAAAGATGCCGCTCTGGAAGATTCCATCGCTCGCTTCCAGCAAAAACTTTCAGACCTCGGCTTTCAGATTGAAGAGGCCTCCTGGCTGAATCCCGTGCCTAACGTCTGGTCTGTACATATTCGCGACAAAGAGTGCGCACTGTGTTTTACCAACGGTAAAGGCGCAACCAAGAAAGCGGCGCTGGCTTCTGCACTCGGTGAATATTTCGAGCGTCTCTCAACCAACTACTTTTTTGCGGACTTCTGGCTGGGCGAAACCATCGCCAACGGTCCGTTCGTGCATTATCCCAACGAAAAATGGTTCCCACTGACCGAAAATGACGATGTGCCAGAAGGGCTGCTCGATGACCGTCTGCGCGCGTTTTATGATCCGGAGAATGAACTGACCGGCAGCATGCTGATTGACCTACAATCCGGTAACGAAGATCGTGGTATTTGCGGCCTGCCGTTTACGCGTCAGTCCGACAATCAGACCGTTTATATTCCGATGAATATCATTGGTAACCTGTACGTCTCCAACGGTATGTCCGCAGGTAATACCCGCAACGAAGCACGCGTTCAGGGATTGTCTGAAGTTTTCGAACGCTACGTGAAAAACCGCATTATTGCTGAAAGCATCAGCCTGCCAGAGATCCCGGCAGACGTGCTGGCGCGTTACCCAGCAGTAGTTGAAGCCATCGAAACGCTGGAAGCGGAGGGTTTCCCAATCTTCGCTTATGACGGTTCGCTTGGCGGCCAGTATCCGGTGATTTGCGTGGTACTGTTCAATCCTGCTAACGGTACCTGCTTTGCCTCTTTCGGTGCGCATCCTGATTTTGGCGTAGCACTGGAACGTACCGTGACCGAGCTGCTGCAAGGTCGTGGCCTGAAAGATTTGGATGTGTTTACTCCGCCAACCTTCGATGATGAAGAAGTCGCTGAACATACCAACCTCGAAACGCACTTTATCGATTCCAGCGGTTTAATCTCCTGGGACCTGTTCAAGCAGGATGCCGATTATCCGTTTGTGGACTGGAATTTCTCCGGCACCACGGAAGAAGAGTTCGCCACACTGATGGCTATCTTCAACAAAGAAGATAAAGAAGTTTATATTGCCGATTACGAGCATCTGGGCGTTTATGCTTGCCGTATTATCGTGCCTGGCATGTCCGATATTTATCCGGCTGAAGATCTGTGGCTCGCGAATAACAGTATGGGCAGCCATTTACGTGAAACGATTCTTTCGCTACCAGGCAGCGAGTGGGAAAAAGAAGATTACCTGAACCTCATCGAGCAACTGGATGAAGAAGGTTTTGATGACTTTACCCGCGTGCGTGAGCTGTTGGGTCTGGCGACCGGGTCGGATAACGGTTGGTACACCCTGCGTATCGGTGAATTAAAAGCCATGCTGGCGCTGGCTGGTGGCGATCTGGAACAGGCTCTGGTCTGGACCGAATGGACGATGGAGTTTAACTCATCAGTATTTAGTCCGGAACGCGCCAACTATTATCGCTGCCTGCAAACGTTGTTATTACTGGCACAGGAAGAAGATCGCCAGCCGCTGCAATATCTGAATGCGTTTGTTCGCATGTACGGCGCAGATGCCGTAGAAGCCGCCAGTGCGGCAATGAGCGGCGAAGCGGCGTTTTACGGCCTGCAACCGGTAGATAGCGATCTGCACGCGTTTGCTGCACATCAGTCGTTGTTGAAGGCCTACGAAAAGCTGCAGCGCGCCAAAGCAGCATTCTGGGCAAAATAA", - "dna_sequence_length": 1761, - "functions": [ - "ribosomal protein S12 methylthiotransferase accessory factor" - ], - "id": "CDS_886", - "location": [ - [ - "NC_000913", - 956632, - "-", - 1761 - ] - ], - "md5": "ae4f381a7478b8211ad884a1c897ab70", - "parent_gene": "", - "protein_md5": "81fa0f48ee292b07953b4dc629a58709", - "protein_translation": "MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK", - "protein_translation_length": 586, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13700" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75839" - ], - [ - "gene_synonym", - "JW0889" - ], - [ - "gene_synonym", - "NP_415426.1" - ], - [ - "gene_synonym", - "GeneID:945525" - ], - [ - "gene_synonym", - "ECK0897" - ], - [ - "gene_synonym", - "b0906" - ], - [ - "gene_synonym", - "ASAP:ABE-0003089" - ], - [ - "gene_synonym", - "ycaP" - ], - [ - "gene_synonym", - "GI:16128873" - ] - ], - "dna_sequence": "ATGAAGGCGTTCGATCTCCACCGTATGGCATTTGATAAAGTGCCTTTTGATTTCCTTGGCGAAGTTGCACTACGTAGTCTTTATACCTTTGTACTGGTCTTTTTGTTCCTCAAAATGACCGGAAGACGCGGTGTGCGGCAGATGTCGCTGTTTGAAGTTTTAATCATTCTGACGCTGGGATCAGCGGCGGGAGATGTGGCGTTTTATGATGATGTGCCGATGGTCCCGGTACTTATCGTCTTTATTACTCTGGCGTTGTTATACCGCCTGGTAATGTGGTTGATGGCGCACAGTGAAAAACTGGAAGATCTTCTGGAAGGCAAGCCAGTTGTCATTATTGAAGATGGCGAGCTGGCCTGGTCGAAACTCAATAACTCCAACATGACGGAATTTGAGTTCTTTATGGAGCTACGATTGCGTGGCGTGGAGCAGCTGGGGCAGGTACGTCTGGCGATTCTCGAAACCAACGGGCAAATCAGTGTCTATTTCTTTGAAGATGACAAGGTGAAACCGGGTTTACTTATTTTACCCAGTGATTGTACGCAGCGTTACAAAGTGGTGCCGGAGTCGGCGGACTATGCCTGTATTCGTTGTAGTGAAATCATTCATATGAAAGCGGGGGAAAAACAATTATGTCCGCGCTGTGCAAATCCAGAATGGACGAAGGCAAGTCGGGCAAAACGGGTGACCTGA", - "dna_sequence_length": 693, - "functions": [ - "UPF0702 family putative inner membrane protein" - ], - "id": "CDS_887", - "location": [ - [ - "NC_000913", - 956762, - "+", - 693 - ] - ], - "md5": "8fd78eee83131e44cc2c0d1d500cd5a3", - "parent_gene": "", - "protein_md5": "8b942c35860846a30392f6a1560ac9f7", - "protein_translation": "MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRGVRQMSLFEVLIILTLGSAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLEDLLEGKPVVIIEDGELAWSKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQISVYFFEDDKVKPGLLILPSDCTQRYKVVPESADYACIRCSEIIHMKAGEKQLCPRCANPEWTKASRAKRVT", - "protein_translation_length": 230, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0890" - ], - [ - "gene_synonym", - "ECK0898" - ], - [ - "gene_synonym", - "GeneID:945527" - ], - [ - "gene_synonym", - "pdxC" - ], - [ - "gene_synonym", - "pdxF" - ], - [ - "gene_synonym", - "b0907" - ], - [ - "gene_synonym", - "serC" - ], - [ - "gene_synonym", - "GI:16128874" - ], - [ - "gene_synonym", - "ASAP:ABE-0003093" - ], - [ - "gene_synonym", - "NP_415427.1" - ], - [ - "gene_synonym", - "EcoGene:EG10946" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23721" - ] - ], - "dna_sequence": "ATGGCTCAAATCTTCAATTTTAGTTCTGGTCCGGCAATGCTACCGGCAGAGGTGCTTAAACAGGCTCAACAGGAACTGCGCGACTGGAACGGTCTTGGTACGTCGGTGATGGAAGTGAGTCACCGTGGCAAAGAGTTCATTCAGGTTGCAGAGGAAGCCGAGAAGGATTTTCGCGATCTTCTTAATGTCCCCTCCAACTACAAGGTATTATTCTGCCATGGCGGTGGTCGCGGTCAGTTTGCTGCGGTACCGCTGAATATTCTCGGTGATAAAACCACCGCAGATTATGTTGATGCCGGTTACTGGGCGGCAAGTGCCATTAAAGAAGCGAAAAAATACTGCACGCCTAATGTCTTTGACGCCAAAGTGACTGTTGATGGTCTGCGCGCGGTTAAGCCAATGCGTGAATGGCAACTCTCTGATAATGCTGCTTATATGCATTATTGCCCGAATGAAACCATCGATGGTATCGCCATCGACGAAACGCCAGACTTCGGCGCAGATGTGGTGGTCGCCGCTGACTTCTCTTCAACCATTCTTTCCCGTCCGATTGACGTCAGCCGTTATGGTGTAATTTACGCTGGCGCGCAGAAAAATATCGGCCCGGCTGGCCTGACAATCGTCATCGTTCGTGAAGATTTGCTGGGCAAAGCGAATATCGCGTGTCCGTCGATTCTGGATTATTCCATCCTCAACGATAACGGCTCCATGTTTAACACGCCGCCGACATTTGCCTGGTATCTATCTGGTCTGGTCTTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATGGGGTGATTGATAACAGCGATTTCTACCGCAATGACGTGGCGAAAGCTAACCGTTCGCGGATGAACGTGCCGTTCCAGTTGGCGGACAGTGCGCTTGACAAATTGTTCCTTGAAGAGTCTTTTGCTGCTGGCCTTCATGCACTGAAAGGTCACCGTGTGGTCGGCGGAATGCGCGCTTCTATTTATAACGCCATGCCGCTGGAAGGCGTTAAAGCGCTGACAGACTTCATGGTTGAGTTCGAACGCCGTCACGGTTAA", - "dna_sequence_length": 1089, - "functions": [ - "3-phosphoserine/phosphohydroxythreonine aminotransferase" - ], - "id": "CDS_888", - "location": [ - [ - "NC_000913", - 957653, - "+", - 1089 - ] - ], - "md5": "583d721be6122cdd24fc250df41a55c3", - "parent_gene": "", - "protein_md5": "b7a12bfd41d1b3d3a194d047eb9198dc", - "protein_translation": "MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG", - "protein_translation_length": 362, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0891" - ], - [ - "gene_synonym", - "ECK0899" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6D3" - ], - [ - "gene_synonym", - "GeneID:945528" - ], - [ - "gene_synonym", - "NP_415428.1" - ], - [ - "gene_synonym", - "EcoGene:EG10073" - ], - [ - "gene_synonym", - "aroA" - ], - [ - "gene_synonym", - "GI:16128875" - ], - [ - "gene_synonym", - "b0908" - ], - [ - "gene_synonym", - "ASAP:ABE-0003095" - ] - ], - "dna_sequence": "ATGGAATCCCTGACGTTACAACCCATCGCTCGTGTCGATGGCACTATTAATCTGCCCGGTTCCAAGAGCGTTTCTAACCGCGCTTTATTGCTGGCGGCATTAGCACACGGCAAAACAGTATTAACCAATCTGCTGGATAGCGATGACGTGCGCCATATGCTGAATGCATTAACAGCGTTAGGGGTAAGCTATACGCTTTCAGCCGATCGTACGCGTTGCGAAATTATCGGTAACGGCGGTCCATTACACGCAGAAGGTGCCCTGGAGTTGTTCCTCGGTAACGCCGGAACGGCAATGCGTCCGCTGGCGGCAGCTCTTTGTCTGGGTAGCAATGATATTGTGCTGACCGGTGAGCCGCGTATGAAAGAACGCCCGATTGGTCATCTGGTGGATGCGCTGCGCCTGGGCGGGGCGAAGATCACTTACCTGGAACAAGAAAATTATCCGCCGTTGCGTTTACAGGGCGGCTTTACTGGCGGCAACGTTGACGTTGATGGCTCCGTTTCCAGCCAATTCCTCACCGCACTGTTAATGACTGCGCCTCTTGCGCCGGAAGATACGGTGATTCGTATTAAAGGCGATCTGGTTTCTAAACCTTATATCGACATCACACTCAATCTGATGAAGACGTTTGGTGTTGAAATTGAAAATCAGCACTATCAACAATTTGTCGTAAAAGGCGGGCAGTCTTATCAGTCTCCGGGTACTTATTTGGTCGAAGGCGATGCATCTTCGGCTTCTTACTTTCTGGCAGCAGCAGCAATCAAAGGCGGCACTGTAAAAGTGACCGGTATTGGACGTAACAGTATGCAGGGTGATATTCGCTTTGCTGATGTGCTGGAAAAAATGGGCGCGACCATTTGCTGGGGCGATGATTATATTTCCTGCACGCGTGGTGAACTGAACGCTATTGATATGGATATGAACCATATTCCTGATGCGGCGATGACCATTGCCACGGCGGCGTTATTTGCAAAAGGCACCACCACGCTGCGCAATATCTATAACTGGCGTGTTAAAGAGACCGATCGCCTGTTTGCGATGGCAACAGAACTGCGTAAAGTCGGCGCGGAAGTGGAAGAGGGGCACGATTACATTCGTATCACTCCTCCGGAAAAACTGAACTTTGCCGAGATCGCGACATACAATGATCACCGGATGGCGATGTGTTTCTCGCTGGTGGCGTTGTCAGATACACCAGTGACGATTCTTGATCCCAAATGCACGGCCAAAACATTTCCGGATTATTTCGAGCAGCTGGCGCGGATTAGCCAGGCAGCCTGA", - "dna_sequence_length": 1284, - "functions": [ - "5-enolpyruvylshikimate-3-phosphate synthetase" - ], - "id": "CDS_889", - "location": [ - [ - "NC_000913", - 958812, - "+", - 1284 - ] - ], - "md5": "01b9705afa11800712b3f6f0e8a96e34", - "parent_gene": "", - "protein_md5": "3d619470281596fe2c36ea304453db83", - "protein_translation": "MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPLAAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA", - "protein_translation_length": 427, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0892" - ], - [ - "gene_synonym", - "ycaL" - ], - [ - "gene_synonym", - "EcoGene:EG13133" - ], - [ - "gene_synonym", - "NP_415429.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0003098" - ], - [ - "gene_synonym", - "GeneID:945534" - ], - [ - "gene_synonym", - "GI:90111186" - ], - [ - "gene_synonym", - "ECK0900" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P43674" - ], - [ - "gene_synonym", - "b0909" - ] - ], - "dna_sequence": "ATGAAGAATACTAAATTACTGCTGGCGATTGCGACCTCTGCAGCATTACTGACAGGGTGTCAAAATACCCACGGTATTGATACCAATATGGCTATCAGCTCCGGTTTAAATGCCTATAAAGCAGCAACATTAAGCGATGCCGATGCAAAAGCGATTGCCAATCAGGGCTGTGCCGAAATGGACAGCGGCAATCAAGTCGCAAGTAAATCCAGCAAGTACGGTAAACGTCTGGCAAAAATCGCCAAAGCATTGGGTAACAATATTAATGGCACGCCGGTCAACTATAAGGTTTATATGACCAGCGACGTCAACGCATGGGCGATGGCGAACGGCTGTGTTCGTGTCTACAGTGGCCTGATGGACATGATGAATGACAACGAAATTGAAGGCGTTCTGGGCCATGAACTGGGCCACGTCGCGTTGGGTCACTCGCTGGCTGAAATGAAAGCTTCTTATGCGATCGTTGCCGCACGCGATGCCATTTCAGCTACCAGCGGTGTGGCTTCCCAGCTTTCCCGCTCACAATTAGGTGATATCGCAGAAGGCGCTATCAATGCTAAATACTCCCGTGATAAAGAGTCCGAAGCAGATGATTTCTCCTTTGATCTGTTGAAGAAACGTGGCATCAGCACCCAGGGGCTGGTTGGCAGCTTTGAAACACTGGCTAGCCTGGATGGCGGTCGCACCCAGTCCATGTTTGACTCTCACCCACCATCAACAGAGCGTGCGCAACACATCCGTGATCGTATCGCCTCTGGTAAGTAA", - "dna_sequence_length": 765, - "functions": [ - "putative peptidase-related chaperone" - ], - "id": "CDS_890", - "location": [ - [ - "NC_000913", - 960264, - "+", - 765 - ] - ], - "md5": "26caa42d086e71408a864c8fdc81bc25", - "parent_gene": "", - "protein_md5": "fa9eee9ce37cf55213247e138e3f1d15", - "protein_translation": "MKNTKLLLAIATSAALLTGCQNTHGIDTNMAISSGLNAYKAATLSDADAKAIANQGCAEMDSGNQVASKSSKYGKRLAKIAKALGNNINGTPVNYKVYMTSDVNAWAMANGCVRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDAISATSGVASQLSRSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSFETLASLDGGRTQSMFDSHPPSTERAQHIRDRIASGK", - "protein_translation_length": 254, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945535" - ], - [ - "gene_synonym", - "JW0893" - ], - [ - "gene_synonym", - "cmk" - ], - [ - "gene_synonym", - "mssA" - ], - [ - "gene_synonym", - "ycaF" - ], - [ - "gene_synonym", - "ycaG" - ], - [ - "gene_synonym", - "b0910" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6I0" - ], - [ - "gene_synonym", - "ECK0901" - ], - [ - "gene_synonym", - "NP_415430.1" - ], - [ - "gene_synonym", - "GI:16128877" - ], - [ - "gene_synonym", - "ASAP:ABE-0003101" - ], - [ - "gene_synonym", - "EcoGene:EG11265" - ] - ], - "dna_sequence": "ATGACGGCAATTGCCCCGGTTATTACCATTGATGGCCCAAGCGGTGCAGGGAAAGGCACCTTGTGTAAGGCTATGGCGGAAGCGTTGCAATGGCATCTGCTGGACTCGGGTGCAATTTATCGCGTACTGGCATTGGCGGCATTACATCACCATGTTGATGTTGCGTCGGAAGATGCGCTGGTACCGCTGGCATCCCATCTGGATGTACGTTTTGTGTCGACCAATGGCAATCTGGAAGTGATCCTCGAAGGGGAAGATGTCAGCGGCGAAATTCGTACTCAGGAAGTGGCGAATGCAGCTTCACAAGTCGCGGCATTCCCACGCGTTCGTGAAGCATTATTGCGTCGCCAACGCGCGTTTCGCGAATTACCAGGTCTGATTGCCGATGGCCGCGACATGGGAACGGTGGTATTCCCTGATGCACCAGTGAAAATTTTCCTTGACGCCTCCTCGGAAGAACGTGCGCATCGCCGCATGCTACAGTTGCAGGAGAAGGGCTTTAGTGTTAACTTTGAGCGCCTTTTGGCCGAGATCAAAGAACGCGACGACCGCGATCGTAACCGAGCGGTAGCGCCACTGGTTCCGGCAGCCGATGCTTTAGTGTTGGATTCCACCACCTTAAGCATTGAGCAAGTGATTGAAAAAGCGCTACAATACGCGCGCCAGAAATTGGCTCTCGCATAA", - "dna_sequence_length": 684, - "functions": [ - "cytidylate kinase" - ], - "id": "CDS_891", - "location": [ - [ - "NC_000913", - 961201, - "+", - 684 - ] - ], - "md5": "d288ccb95c4d2e784971a109c14f55d7", - "parent_gene": "", - "protein_md5": "0f7490d45baddf54e20237a41e546b97", - "protein_translation": "MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQYARQKLALA", - "protein_translation_length": 227, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945536" - ], - [ - "gene_synonym", - "JW0894" - ], - [ - "gene_synonym", - "rpsA" - ], - [ - "gene_synonym", - "NP_415431.1" - ], - [ - "gene_synonym", - "EcoGene:EG10900" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG67" - ], - [ - "gene_synonym", - "b0911" - ], - [ - "gene_synonym", - "ssyF" - ], - [ - "gene_synonym", - "ASAP:ABE-0003104" - ], - [ - "gene_synonym", - "GI:16128878" - ], - [ - "gene_synonym", - "ECK0902" - ] - ], - "dna_sequence": "ATGACTGAATCTTTTGCTCAACTCTTTGAAGAGTCCTTAAAAGAAATCGAAACCCGCCCGGGTTCTATCGTTCGTGGCGTTGTTGTTGCTATCGACAAAGACGTAGTACTGGTTGACGCTGGTCTGAAATCTGAGTCCGCCATCCCGGCTGAGCAGTTCAAAAACGCCCAGGGCGAGCTGGAAATCCAGGTAGGTGACGAAGTTGACGTTGCTCTGGACGCAGTAGAAGACGGCTTCGGTGAAACTCTGCTGTCCCGTGAGAAAGCTAAACGTCACGAAGCCTGGATCACGCTGGAAAAAGCTTACGAAGATGCTGAAACTGTTACCGGTGTTATCAACGGCAAAGTTAAGGGCGGCTTCACTGTTGAGCTGAACGGTATTCGTGCGTTCCTGCCAGGTTCTCTGGTAGACGTTCGTCCGGTGCGTGACACTCTGCACCTGGAAGGCAAAGAGCTTGAATTTAAAGTAATCAAGCTGGATCAGAAGCGCAACAACGTTGTTGTTTCTCGTCGTGCCGTTATCGAATCCGAAAACAGCGCAGAGCGCGATCAGCTGCTGGAAAACCTGCAGGAAGGCATGGAAGTTAAAGGTATCGTTAAGAACCTCACTGACTACGGTGCATTCGTTGATCTGGGCGGCGTTGACGGCCTGCTGCACATCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAATCACTGTTAAAGTGCTGAAGTTCGACCGCGAACGTACCCGTGTATCCCTGGGCCTGAAACAGCTGGGCGAAGATCCGTGGGTAGCTATCGCTAAACGTTATCCGGAAGGTACCAAACTGACTGGTCGCGTGACCAACCTGACCGACTACGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAAGTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCCACAACAAGGGCGACCGTGTTGAAGGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGGCGCAACCGTAGAACTGGCTGACGGCGTTGAAGGTTACCTGCGTGCTTCTGAAGCATCCCGTGACCGCGTTGAAGACGCTACCCTGGTTCTGAGCGTTGGCGACGAAGTTGAAGCTAAATTCACCGGCGTTGATCGTAAAAACCGCGCAATCAGCCTGTCTGTTCGTGCGAAAGACGAAGCTGACGAGAAAGATGCAATCGCAACTGTTAACAAACAGGAAGATGCAAACTTCTCCAACAACGCAATGGCTGAAGCTTTCAAAGCAGCTAAAGGCGAGTAA", - "dna_sequence_length": 1674, - "functions": [ - "30S ribosomal subunit protein S1" - ], - "id": "CDS_892", - "location": [ - [ - "NC_000913", - 961995, - "+", - 1674 - ] - ], - "md5": "75165db6ef7a215fb50176570957c724", - "parent_gene": "", - "protein_md5": "3a715b3d0635089e27f33e920bee8f54", - "protein_translation": "MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE", - "protein_translation_length": 557, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hip" - ], - [ - "gene_synonym", - "ASAP:ABE-0003107" - ], - [ - "gene_synonym", - "GeneID:945533" - ], - [ - "gene_synonym", - "JW0895" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6Y1" - ], - [ - "gene_synonym", - "NP_415432.1" - ], - [ - "gene_synonym", - "EcoGene:EG10441" - ], - [ - "gene_synonym", - "GI:16128879" - ], - [ - "gene_synonym", - "b0912" - ], - [ - "gene_synonym", - "ECK0903" - ], - [ - "gene_synonym", - "ihfB" - ], - [ - "gene_synonym", - "himD" - ] - ], - "dna_sequence": "ATGACCAAGTCAGAATTGATAGAAAGACTTGCCACCCAGCAATCGCACATTCCCGCCAAGACGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCACTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAA", - "dna_sequence_length": 285, - "functions": [ - "integration host factor (IHF), DNA-binding protein, beta subunit" - ], - "id": "CDS_893", - "location": [ - [ - "NC_000913", - 963828, - "+", - 285 - ] - ], - "md5": "65a45b3b736c0e5129749d5150c7ddba", - "parent_gene": "", - "protein_md5": "2e51831bd5af44198685ea29ced2c512", - "protein_translation": "MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG", - "protein_translation_length": 94, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945531" - ], - [ - "gene_synonym", - "ycaI" - ], - [ - "gene_synonym", - "NP_415433.4" - ], - [ - "gene_synonym", - "EcoGene:EG12375" - ], - [ - "gene_synonym", - "b0913" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37443" - ], - [ - "gene_synonym", - "GI:90111187" - ], - [ - "gene_synonym", - "ECK0904" - ], - [ - "gene_synonym", - "ASAP:ABE-0003111" - ], - [ - "gene_synonym", - "JW5120" - ] - ], - "dna_sequence": "ATGAAAATAACGACAGTCGGTGTATGCATAATTAGCGGAATTTTTCCGTTGCTGATTTTGCCCCAATTGCCTGGGACATTAACCCTTGCGTTTCTGACTCTCTTCGCCTGCGTACTGGCATTTATCCCTGTTAAAACCGTCCGTTATATCGCGCTGACGTTGCTGTTTTTCGTTTGGGGCATATTATCAGCAAAGCAAATTTTGTGGGCAGGAGAAACCTTAACTGGCGCGACGCAGGATGCAATTGTTGAGATCACTGCAACTGACGGCATGACCACTCATTACGGTCAAATTACTCATCTACAAGGTCGACGTATATTCCCTGCGTCAGGTCTCGTGATGTATGGCGAATATCTTCCGCAAGCGGTTTGTGCTGGACAACAATGGTCAATGAAACTCAAAGTTCGTGCAGTTCATGGCCAACTTAATGATGGCGGCTTTGATAGCCAGCGTTATGCCATTGCCCAGCATCAGCCGCTCACCGGCCGTTTTCTGCAGGCAAGTGTCATTGAACCGAATTGTAGCCTGCGTGCACAGTATCTGGCGTCACTACAAACAACGCTGCAACCCTATCCGTGGAATGCGGTTATTCTTGGTTTAGGTATGGGGGAACGGTTATCCGTCCCCAAAGAAATCAAAAATATCATGCGCGATACTGGAACGGCGCATTTAATGGCGATATCGGGATTGCACATCGCTTTTGCGGCGTTGCTGGCTGCCGGACTCATTCGCAGTGGACAAATTTTTCTGCCTGGGCGCTGGATCCACTGGCAAATACCATTAATTGGCGGAATCTGCTGTGCTGCTTTTTATGCCTGGTTGACGGGAATGCAACCTCCTGCATTGCGTACCATGGTGGCGCTTGCTACGTGGGGAATGCTTAAGTTAAGTGGGCGACAGTGGAGTGGCTGGGATGTATGGATATGTTGTCTGGCGGCAATTTTGCTGATGGATCCTGTTGCCATTCTCTCGCAAAGTTTATGGCTCTCTGCCGCTGCGGTCGCGGCATTGATATTTTGGTATCAGTGGTTTCCCTGTCCTGAGTGGCAACTGCCGCCGGTATTGCGTGCAGTTGTTTCCCTCATCCATCTGCAACTGGGAATCACACTTCTGCTTATGCCCGTGCAAATCGTCATATTTCATGGCATTAGTCTGACCTCGTTTATTGCAAATCTATTAGCAATTCCCTTGGTGACATTTATCACGGTTCCGTTGATCCTCGCCGCGATGGTTGTGCATTTAAGCGGGCCGTTAATCCTGGAGCAAGGGTTATGGTTTCTTGCCGACCGGTCTTTGGCTTTACTTTTCTGGGGGTTAAAGAGTTTGCCGGAAGGGTGGATCAACATTGCTGAATGTTGGCAATGGCTATCATTTTCCCCATGGTTCTTACTGGTGGTATGGCGATTAAACGCCTGGCGAACGTTGCCAGCAATGTGTGTGGCTGGAGGCTTGCTGATGTGCTGGCCGCTGTGGCAAAAACCTCGACCTGACGAGTGGCAGCTGTACATGCTTGATGTCGGGCAAGGGCTGGCAATGGTGATAGCCAGAAACGGCAAAGCGATTCTCTATGACACAGGACTGGCCTGGCCTGAAGGGGATAGTGGGCAACAACTGATTATCCCCTGGCTCCACTGGCATAATCTTGAACCGGAAGGCGTTATTCTGAGCCATGAACATCTGGATCACCGGGGAGGGCTGGATTCAATATTGCATATATGGCCGATGTTATGGATCAGAAGTCCGTTAAACTGGGAACATCATCAGCCCTGTGTGCGTGGCGAAGCGTGGCAATGGCAAGGATTGCGTTTCAGCGCGCACTGGCCTTTACAAGGTAGCAACGATAAAGGAAATAACCATTCCTGTGTGGTTAAGGTTGATGACGGGACGAATAGCATTCTTCTAACCGGTGATATTGAAGCCCCAGCTGAACAAAAGATGCTAAGCCGTTACTGGCAGCAAGTGCAGGCAACATTGCTTCAGGTACCTCACCATGGCAGTAATACCTCATCATCGTTGCCATTAATTCAGCGAGTGAATGGAAAAGTGGCACTCGCATCGGCATCGCGCTATAACGCATGGCGACTGCCCTCTAACAAAGTTAAGCATCGCTATCAACTGCAAGGATATCAATGGATTGATACTCCACATCAAGGTCAAACAACGGTCAATTTTTCAGCGCAAGGCTGGCGGATTAGCAGCCTCAGGGAGCAAATTTTACCTCGTTGGTATCATCAGTGGTTTGGCGTGCCAGTGGATAACGGGTAG", - "dna_sequence_length": 2265, - "functions": [ - "ComEC family inner membrane protein" - ], - "id": "CDS_894", - "location": [ - [ - "NC_000913", - 964320, - "+", - 2265 - ] - ], - "md5": "45116e91278464e2d46e7930e9233f28", - "parent_gene": "", - "protein_md5": "373bbab8191d4a4ac69422e3a3369911", - "protein_translation": "MKITTVGVCIISGIFPLLILPQLPGTLTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWGILSAKQILWAGETLTGATQDAIVEITATDGMTTHYGQITHLQGRRIFPASGLVMYGEYLPQAVCAGQQWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPLTGRFLQASVIEPNCSLRAQYLASLQTTLQPYPWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAAGLIRSGQIFLPGRWIHWQIPLIGGICCAAFYAWLTGMQPPALRTMVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPVAILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFWGLKSLPEGWINIAECWQWLSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPDEWQLYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHLDHRGGLDSILHIWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSAHWPLQGSNDKGNNHSCVVKVDDGTNSILLTGDIEAPAEQKMLSRYWQQVQATLLQVPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSNKVKHRYQLQGYQWIDTPHQGQTTVNFSAQGWRISSLREQILPRWYHQWFGVPVDNG", - "protein_translation_length": 754, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415434.1" - ], - [ - "gene_synonym", - "JW0897" - ], - [ - "gene_synonym", - "GI:16128881" - ], - [ - "gene_synonym", - "ASAP:ABE-0003113" - ], - [ - "gene_synonym", - "GeneID:945530" - ], - [ - "gene_synonym", - "b0914" - ], - [ - "gene_synonym", - "EcoGene:EG10613" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60752" - ], - [ - "gene_synonym", - "ECK0905" - ], - [ - "gene_synonym", - "msbA" - ] - ], - "dna_sequence": "ATGCATAACGACAAAGATCTCTCTACGTGGCAGACATTCCGCCGACTGTGGCCAACCATTGCGCCTTTCAAAGCGGGTCTGATCGTGGCGGGCGTAGCGTTAATCCTCAACGCAGCCAGCGATACCTTCATGTTATCGCTCCTTAAGCCACTTCTTGATGATGGCTTTGGTAAAACAGATCGCTCCGTGCTGGTGTGGATGCCGCTGGTGGTGATCGGGCTGATGATTTTACGTGGTATCACCAGCTATGTCTCCAGCTACTGTATCTCCTGGGTATCAGGAAAGGTGGTAATGACCATGCGTCGCCGCCTGTTTGGTCACATGATGGGAATGCCAGTTTCATTCTTTGACAAACAGTCAACGGGTACGCTGTTGTCACGTATTACCTACGATTCCGAACAGGTTGCTTCTTCTTCTTCCGGCGCACTGATTACTGTTGTGCGTGAAGGTGCGTCGATCATCGGCCTGTTCATCATGATGTTCTATTACAGTTGGCAACTGTCGATCATTTTGATTGTGCTGGCACCGATTGTTTCGATTGCGATTCGCGTTGTATCGAAGCGTTTTCGCAACATCAGTAAAAACATGCAGAACACCATGGGGCAGGTGACCACCAGCGCAGAACAAATGCTGAAGGGCCACAAAGAAGTATTGATTTTCGGTGGTCAGGAAGTGGAAACGAAACGCTTTGATAAAGTCAGCAACCGAATGCGTCTTCAGGGGATGAAAATGGTTTCAGCCTCTTCCATCTCTGATCCGATCATTCAGCTGATCGCCTCTTTGGCGCTGGCGTTTGTTCTGTATGCGGCGAGCTTCCCAAGTGTCATGGATAGCCTGACTGCCGGTACGATTACCGTTGTTTTCTCTTCAATGATTGCACTGATGCGTCCGCTGAAATCGCTGACCAACGTTAACGCCCAGTTCCAGCGCGGTATGGCGGCTTGTCAGACGCTGTTTACCATTCTGGACAGTGAGCAGGAGAAAGATGAAGGTAAGCGCGTGATCGAGCGTGCGACTGGCGACGTGGAATTCCGCAATGTCACCTTTACTTATCCGGGACGTGACGTACCTGCATTGCGTAACATCAACCTGAAAATTCCGGCAGGGAAGACGGTTGCTCTGGTTGGACGCTCTGGTTCGGGTAAATCAACCATCGCCAGCCTGATCACGCGTTTTTACGATATTGATGAAGGCGAAATCCTGATGGATGGTCACGATCTGCGCGAGTATACCCTGGCGTCGTTACGTAACCAGGTTGCTCTGGTGTCGCAGAATGTCCATCTGTTTAACGATACGGTTGCTAACAACATTGCTTACGCACGGACTGAACAGTACAGCCGTGAGCAAATTGAAGAAGCGGCGCGTATGGCCTACGCCATGGACTTCATCAATAAGATGGATAACGGTCTCGATACAGTGATTGGTGAAAACGGCGTGCTGCTCTCTGGCGGTCAGCGTCAGCGTATTGCTATCGCTCGAGCCTTGTTGCGTGATAGCCCGATTCTGATTCTGGACGAAGCTACCTCGGCTCTGGATACCGAATCCGAACGTGCGATTCAGGCGGCACTGGATGAGTTGCAGAAAAACCGTACCTCTCTGGTGATTGCCCACCGCTTGTCTACCATTGAAAAGGCAGACGAAATCGTGGTCGTCGAGGATGGTGTCATTGTGGAACGCGGTACGCATAACGATTTGCTTGAGCACCGCGGCGTTTACGCGCAACTTCACAAAATGCAGTTTGGCCAATGA", - "dna_sequence_length": 1749, - "functions": [ - "lipid ABC transporter permease/ATPase" - ], - "id": "CDS_895", - "location": [ - [ - "NC_000913", - 966621, - "+", - 1749 - ] - ], - "md5": "d9241f5cb2ef99acfb25416a04b3d9c4", - "parent_gene": "", - "protein_md5": "bb4f3221a11faf89b813e5b68603aa1e", - "protein_translation": "MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRVIERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLLEHRGVYAQLHKMQFGQ", - "protein_translation_length": 582, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "lpxK" - ], - [ - "gene_synonym", - "GeneID:945526" - ], - [ - "gene_synonym", - "ycaH" - ], - [ - "gene_synonym", - "JW0898" - ], - [ - "gene_synonym", - "b0915" - ], - [ - "gene_synonym", - "NP_415435.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27300" - ], - [ - "gene_synonym", - "ASAP:ABE-0003115" - ], - [ - "gene_synonym", - "GI:16128882" - ], - [ - "gene_synonym", - "EcoGene:EG11409" - ], - [ - "gene_synonym", - "ECK0906" - ] - ], - "dna_sequence": "ATGATCGAAAAAATCTGGTCTGGTGAATCCCCTTTGTGGCGGCTATTGCTGCCACTCTCCTGGTTGTATGGCCTGGTGAGTGGCGCGATCCGTCTTTGCTATAAACTAAAACTGAAGCGCGCCTGGCGTGCCCCCGTACCGGTTGTCGTGGTTGGTAATCTCACCGCAGGCGGCAACGGAAAAACCCCGGTCGTTGTCTGGCTGGTGGAACAGTTGCAACAGCGCGGTATTCGCGTGGGGGTCGTATCGCGGGGATATGGTGGTAAGGCTGAATCTTATCCGCTGTTATTGTCGGCAGATACCACAACAGCACAGGCGGGTGATGAACCTGTGTTGATTTATCAACGCACTGATGCGCCTGTTGCGGTTTCTCCCGTTCGTTCTGATGCGGTAAAAGCCATTCTGGCGCAACACCCTGATGTGCAGATCATCGTAACCGACGACGGTTTACAGCATTACCGTCTGGCGCGTGATGTGGAAATTGTCGTTATTGATGGTGTGCGTCGCTTTGGCAATGGCTGGTGGTTGCCGGCGGGGCCAATGCGTGAGCGAGCGGGGCGCTTAAAGTCGGTTGATGCGGTAATCGTCAACGGCGGTGTCCCTCGCAGCGGTGAAATCCCCATGCATCTGCTGCCGGGTCAGGCGGTGAATTTACGTACCGGTACGCGTTGTGACGTTGCTCAGCTTGAACATGTAGTGGCGATGGCGGGGATTGGGCATCCGCCGCGCTTTTTTGCCACGCTGAAGATGTGTGGCGTACAACCGGAAAAATGTGTACCGCTGGCCGATCATCAGTCTTTGAACCATGCGGATGTCAGTGCGTTGGTAAGCGCCGGGCAAACGCTGGTAATGACTGAAAAAGATGCGGTGAAATGCCGGGCCTTTGCAGAAGAAAATTGGTGGTATTTGCCTGTAGACGCACAGCTTTCAGGTGATGAACCAGCGAAACTGCTTACGCAACTAACCTTGCTGGCTTCTGGCAACTAG", - 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"UniProtKB/Swiss-Prot:P75843" - ], - [ - "gene_synonym", - "ASAP:ABE-0003117" - ], - [ - "gene_synonym", - "ycaQ" - ], - [ - "gene_synonym", - "GI:16128883" - ] - ], - "dna_sequence": "ATGTCGCTGCCGCACCTCTCCCTTGCTGATGCGCGTAATCTTCACCTTGCCGCACAAGGCCTGTTAAACAAACCCCGCCGTCGAGCGTCGTTGGAGGATATTCCGGCAACGATCTCCCGCATGTCCTTGCTGCAAATCGATACCATCAATATTGTTGCCCGTAGTCCATATCTGGTGCTTTTCAGTCGTCTGGGAAATTATCCTGCCCAGTGGCTGGATGAGTCTCTGGCGCGTGGCGAATTAATGGAATACTGGGCGCATGAAGCCTGCTTTATGCCGCGTAGCGACTTTCGTCTTATTCGCCACCGCATGCTGGCACCTGAAAAAATGGGCTGGAAATACAAAGACGCCTGGATGCAGGAACATGAGGCGGAAATTGCACAGTTAATTCAGCATATTCATGATAAGGGGCCGGTACGTTCAGCCGATTTTGAGCATCCTCGTAAAGGTGCAAGCGGCTGGTGGGAATGGAAGCCGCATAAACGGCATCTGGAAGGTTTATTTACTGCCGGAAAGGTGATGGTGATTGAACGGCGCAACTTCCAGCGCGTTTATGATTTAACCCACCGTGTCATGCCTGACTGGGATGATGAGCGCGATCTCGTTTCGCAAACAGAAGCAGAAATCATCATGCTGGATAACAGTGCGCGTAGCCTGGGAATATTCCGCGAACAGTGGCTGGCAGATTACTATCGGCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGCGCTGGCCGGAAAGCTCACTGCAACGCACAGCGCGGTACTTTCGCCTTTTGATCCTGTTGTCTGGGATCGCAAACGCGCAGAGCAGCTTTTTGATTTTAGCTACCGGCTGGAGTGCTATACCCCAGCGCCGAAACGCCAGTATGGCTATTTTGTTCTGCCGTTATTACATCGTGGGCAATTAGTTGGGCGAATGGATGCCAAAATGCATCGCCAGACAGGCATCCTTGAAGTTATCTCTCTGTGGTTACAGGAAGGTATTAAACCAACGACAACGCTGCAAAAAGGGCTACGTCAGGCGATTACTGATTTCGCTAACTGGCAGCAGGCAACGCGGGTGACATTAGGATGCTGCCCGCAAGGCCTCTTTACTGATTGCCGCACCGGCTGGGAAATAGACCCCGTCGCATAA", 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"UniProtKB/Swiss-Prot:P0AAZ7" - ], - [ - "gene_synonym", - "ECK0908" - ], - [ - "gene_synonym", - "b0917" - ], - [ - "gene_synonym", - "EcoGene:EG14287" - ], - [ - "gene_synonym", - "GI:16128884" - ], - [ - "gene_synonym", - "ycaR" - ], - [ - "gene_synonym", - "JW0900" - ] - ], - "dna_sequence": "ATGGATCATCGTCTGCTTGAAATCATTGCCTGCCCGGTTTGCAACGGAAAACTTTGGTATAACCAGGAAAAACAAGAGCTTATTTGCAAACTGGACAACCTCGCTTTCCCGCTGCGTGATGGCATTCCAGTGTTGCTGGAAACGGAAGCCCGCGTGCTGACTGCTGATGAGAGTAAATCATGA", - "dna_sequence_length": 183, - "functions": [ - "peroxide and acid resistance protein, UPF0434 family" - ], - "id": "CDS_898", - "location": [ - [ - "NC_000913", - 970673, - "+", - 183 - ] - ], - "md5": "e5f198c0002de86eb5a7f6e2297626ec", - "parent_gene": "", - "protein_md5": "f54b03733b9accf07b649354c09ff99e", - "protein_translation": "MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPVLLETEARVLTADESKS", - "protein_translation_length": 60, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003122" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04951" - ], - [ - "gene_synonym", - "EcoGene:EG10519" - ], - [ - "gene_synonym", - "NP_415438.1" - ], - [ - "gene_synonym", - "GeneID:945539" - ], - [ - "gene_synonym", - "ECK0909" - ], - [ - "gene_synonym", - "kdsB" - ], - [ - "gene_synonym", - "GI:16128885" - ], - [ - "gene_synonym", - "b0918" - ], - [ - "gene_synonym", - "JW0901" - ] - ], - "dna_sequence": "ATGAGTTTTGTGGTCATTATTCCCGCGCGCTACGCGTCCACGCGTCTGCCCGGTAAACCATTGGTTGATATTAACGGCAAACCCATGATTGTTCATGTTCTTGAACGCGCGCGTGAATCAGGTGCCGAGCGCATCATCGTGGCAACCGATCATGAGGATGTTGCCCGCGCCGTTGAAGCCGCTGGCGGTGAAGTATGTATGACGCGCGCCGATCATCAGTCAGGAACAGAACGTCTGGCGGAAGTTGTCGAAAAATGCGCATTCAGCGACGACACGGTGATCGTTAATGTGCAGGGTGATGAACCGATGATCCCTGCGACAATCATTCGTCAGGTTGCTGATAACCTCGCTCAGCGTCAGGTGGGTATGGCGACTCTGGCGGTGCCAATCCACAATGCGGAAGAAGCGTTTAACCCGAATGCGGTGAAAGTGGTTCTCGACGCTGAAGGGTATGCACTGTACTTCTCTCGCGCCACCATTCCTTGGGATCGTGATCGTTTTGCAGAAGGCCTTGAAACCGTTGGCGATAACTTCCTGCGTCATCTTGGTATTTATGGCTACCGTGCAGGCTTTATCCGTCGTTACGTCAACTGGCAGCCAAGTCCGTTAGAACACATCGAAATGTTAGAGCAGCTTCGTGTTCTGTGGTACGGCGAAAAAATCCATGTTGCTGTTGCTCAGGAAGTTCCTGGCACAGGTGTGGATACCCCTGAAGATCTTGAGCGCGTTCGCGCTGAAATGCGCTAA", - "dna_sequence_length": 747, - "functions": [ - "3-deoxy-manno-octulosonate cytidylyltransferase" - ], - "id": "CDS_899", - "location": [ - [ - "NC_000913", - 970852, - "+", - 747 - ] - ], - "md5": "3fafaf50bc6063868744b63a42f2b952", - "parent_gene": "", - "protein_md5": "4958103bc71341f7156bffe93334285c", - "protein_translation": "MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEMR", - "protein_translation_length": 248, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ycbJ" - ], - [ - "gene_synonym", - "EcoGene:EG13702" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB03" - ], - [ - "gene_synonym", - "ECK0910" - ], - [ - "gene_synonym", - "ASAP:ABE-0003125" - ], - [ - "gene_synonym", - "b0919" - ], - [ - "gene_synonym", - "GeneID:945545" - ], - [ - "gene_synonym", - "GI:16128886" - ], - [ - "gene_synonym", - "JW0902" - ], - [ - "gene_synonym", - "NP_415439.1" - ] - ], - "dna_sequence": "ATGGAACAGCTGCGTGCCGAATTAAGCCATTTACTGGGCGAAAAACTCAGTCGTATTGAGTGCGTCAATGAAAAAGCGGATACGGCGTTGTGGGCTTTGTATGACAGCCAGGGAAACCCAATGCCGTTAATGGCAAGAAGCTTTAGTACGCCCGGAAAAGCCCGACAACTGGCATGGAAAACCACCATGCTGGCAAGAAGTGGGACTGTCCGTATGCCGACTATTTATGGTGTGATGACGCATGAAGAACACCCCGGCCCCGATGTCCTGCTACTGGAGCGGATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTACTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATGGTACCGGCAACATGTTGAAGTGCTATGGACCACGCTCAATCAGTTCAATAACACCGGTCTGACGATGCAGGATAAGCGGATCCTGTTTCGCACTCGCGAATGTCTCCCGGCATTATTTGAAGGCTTTAACGACAATTGTGTGCTGATTCACGGTAACTTCTGTTTACGCAGCATGTTGAAAGATTCGCGCAGCGATCAGTTACTGGCGATGGTCGGGCCGGGACTAATGCTTTGGGCACCGCGAGAATACGAACTGTTCCGACTAATGGATAATTCTCTGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGA", - "dna_sequence_length": 894, - "functions": [ - "protein kinase-like domain protein" - ], - "id": 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- "gene_synonym", - "b0920" - ], - [ - "gene_synonym", - "JW0903" - ] - ], - "dna_sequence": "ATGCTTTTTACACTGAAAAAAGTGATTGGCAATATGTTGCTGCCACTTCCGCTGATGTTGTTGATTATTGGCGCTGGCCTGGCGCTGCTGTGGTTTAGCCGTTTTCAAAAAACCGGGAAGATTTTTATTAGCATTGGGTGGCTGGCGCTCTTGTTATTGAGTTTGCAACCGGTAGCCGACCGCCTGCTGCGTCCCATCGAAAGCACCTATCCGACATGGAATAATTCGCAAAAAGTGGACTATATCGTGGTGCTCGGAGGTGGTTATACCTGGAACCCGCAGTGGGCACCGAGCTCTAATTTAATCAATAACAGTCTGCCACGCCTGAATGAAGGTATTCGCTTATGGCGCGAAAATCCGGGATCAAAACTGATCTTCACGGGAGGCGTAGCAAAAACCAATACGGTGAGTACAGCGGAAGTAGGTGCCAGAGTTGCGCAATCGCTGGGCGTGCCGCGCGAGCAAATTATCACCCTGGATTTGCCAAAAGATACCGAAGAAGAAGCTGCAGCAGTGAAACAGGCGATTGGTGACGCCCCTTTCCTGCTGGTGACCTCCGCATCACATCTGCCGCGGGCGATGATCTTTTTTCAGCAGGAAGGGTTAAATCCGCTACCAGCCCCGGCGAATCAGTTGGCCATCGACTCGCCGCTTAACCCGTGGGAACGGGCAATCCCTTCTCCGGTCTGGTTGATGCATAGCGATCGTGTTGGCTATGAAACGCTTGGCCGTATCTGGCAGTGGCTAAAAGGTTCGTCAGGCGAGCCACGGCAAGAGTGA", - "dna_sequence_length": 780, - "functions": [ - "envelope biogenesis factor", - "DUF218 superfamily protein" - ], - "id": "CDS_901", - "location": [ - [ - "NC_000913", - 973401, - "-", - 780 - ] - ], - "md5": "ac23462da3aa8d61ad3db1c0e059be90", - "parent_gene": "", - "protein_md5": "127d0173cfd988c9ebeac149d149284b", - "protein_translation": "MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTGKIFISIGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPLNPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGSSGEPRQE", - "protein_translation_length": 259, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0912" - ], - [ - "gene_synonym", - "NP_415441.1" - ], - [ - "gene_synonym", - "ycbD" - ], - [ - "gene_synonym", - "b0921" - ], - [ - "gene_synonym", - "GeneID:945547" - ], - [ - "gene_synonym", - "GI:16128888" - ], - [ - "gene_synonym", - "EcoGene:EG12167" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36566" - ], - [ - "gene_synonym", - "ASAP:ABE-0003131" - ], - [ - "gene_synonym", - "JW0904" - ], - [ - "gene_synonym", - "smtA" - ] - ], - "dna_sequence": "ATGCAGGATCGCAATTTTGATGATATTGCGGAAAAGTTTTCCCGTAACATTTACGGCACCACCAAAGGGCAGCTTCGACAGGCTATTCTGTGGCAGGATCTCGATCGCGTGCTGGCGGAAATGGGCCCGCAAAAACTGCGTGTGCTGGATGCTGGCGGTGGAGAAGGGCAGACCGCAATCAAAATGGCCGAGCGTGGGCATCAGGTCATTTTATGCGATCTTTCTGCGCAGATGATCGACCGCGCAAAACAGGCGGCAGAAGCAAAAGGTGTGAGCGACAACATGCAATTTATACATTGCGCCGCTCAGGATGTTGCTTCGCATTTGGAAACGCCCGTTGATCTGATATTGTTCCATGCGGTGCTCGAGTGGGTGGCTGATCCCCGCAGCGTATTGCAGACCCTCTGGTCAGTGTTGCGTCCAGGCGGCGTGTTGTCGTTAATGTTCTACAATGCGCATGGTTTGTTGATGCATAACATGGTCGCCGGGAATTTTGATTACGTGCAGGCGGGAATGCCGAAAAAGAAAAAACGGACGCTTTCGCCAGATTATCCACGCGACCCGGCGCAGGTTTATCTGTGGCTGGAAGAAGCTGGTTGGCAAATTATGGGTAAGACAGGCGTTCGCGTGTTTCATGATTATCTGCGCGAGAAACACCAGCAGCGCGACTGCTATGAAGCATTACTTGAATTAGAAACGCGTTATTGCCGTCAGGAACCGTATATTACCCTGGGGCGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGA", - "dna_sequence_length": 786, - "functions": [ - "putative S-adenosyl-L-methionine-dependent methyltransferase" - ], - "id": "CDS_902", - "location": [ - [ - "NC_000913", - 973537, - "+", - 786 - ] - ], - "md5": "5566a7ebc7b2958dc6f7a8643a8a8e81", - "parent_gene": "", - "protein_md5": "ae2794a89131c536e6628a86d1019515", - "protein_translation": "MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV", - "protein_translation_length": 261, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003134" - ], - [ - "gene_synonym", - "NP_415442.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60293" - ], - [ - "gene_synonym", - "GI:16128889" - ], - [ - "gene_synonym", - "mukF" - ], - [ - "gene_synonym", - "kicB" - ], - [ - "gene_synonym", - "EcoGene:EG12165" - ], - [ - "gene_synonym", - "JW0905" - ], - [ - "gene_synonym", - "GeneID:945548" - ], - [ - "gene_synonym", - "b0922" - ], - [ - "gene_synonym", - "ECK0913" - ] - ], - "dna_sequence": "ATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCCATGTGAGTGATGCGTTTGAGCAAACCAGCGAAACCATCGGCGTGCGCGCCAATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTGAACCGCTTTACCAGCGAGCAGGCGGAAGGGAACGCAATTTACCGTCTGACGCCGCTCGGCATCGGCATTACTGACTACTACATCCGTCAGCGCGAGTTTTCTACGCTGCGTCTTTCTATGCAGTTGTCGATTGTGGCGGGTGAGCTCAAACGCGCAGCAGATGCCGCCGAAGAGGGCGGTGATGAATTTCACTGGCACCGTAATGTCTATGCGCCACTGAAATATTCGGTAGCAGAAATTTTCGACAGTATCGACCTGACGCAACGTCTGATGGACGAACAGCAGCAGCAGGTGAAGGACGATATCGCCCAGTTGCTGAACAAAGACTGGCGGGCGGCGATTTCCAGCTGTGAATTGTTGCTTTCGGAAACTTCCGGAACGCTGCGTGAATTGCAGGATACGCTGGAAGCGGCAGGCGACAAATTGCAGGCTAATCTGTTGCGCATTCAGGATGCGACGATGACCCATGACGATCTGCATTTCGTCGATCGTCTGGTGTTCGATCTGCAGAGCAAACTCGATCGTATTATCAGTTGGGGCCAGCAATCCATCGACTTGTGGATTGGCTACGACCGCCACGTACACAAATTTATTCGTACCGCGATCGATATGGATAAAAACCGCGTCTTTGCTCAGCGGTTACGTCAGTCGGTACAAACCTATTTTGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAACTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATCTTGGTCTGGTGGTACGCGAATATCTGTCACAGTATCCGCGTGCACGTCACTTTGACGTTGCGCGTATTGTTATTGATCAGGCGGTACGTCTTGGCGTAGCGCAAGCAGATTTCACCGGACTGCCAGCGAAATGGCAGCCGATTAATGATTACGGAGCCAAGGTACAGGCGCATGTCATCGACAAATATTGA", 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- "gene_synonym", - "UniProtKB/Swiss-Prot:P22524" - ], - [ - "gene_synonym", - "EcoGene:EG11252" - ], - [ - "gene_synonym", - "kicA" - ], - [ - "gene_synonym", - "GeneID:945550" - ], - [ - "gene_synonym", - "mukE" - ], - [ - "gene_synonym", - "JW0906" - ], - [ - "gene_synonym", - "NP_415443.2" - ], - [ - "gene_synonym", - "GI:226524705" - ], - [ - "gene_synonym", - "b0923" - ] - ], - "dna_sequence": "ATGTCATCGACAAATATTGAACAAGTGATGCCGGTTAAGCTGGCGCAGGCGCTGGCGAATCCGTTATTTCCGGCGCTGGACAGCGCCTTACGTTCAGGACGCCATATTGGCCTCGACGAACTGGATAATCATGCATTCCTGATGGATTTTCAGGAATATCTGGAAGAGTTTTACGCGCGTTATAACGTTGAGCTTATTCGCGCACCAGAAGGGTTCTTCTATTTACGCCCACGTTCCACCACGCTGATCCCTCGTTCCGTCTTGTCGGAACTGGATATGATGGTCGGGAAAATCCTCTGTTATCTCTATCTCAGCCCGGAACGGCTGGCGAATGAGGGGATTTTCACCCAGCAGGAACTGTACGACGAACTGCTCACCCTGGCCGATGAAGCAAAACTGCTGAAACTGGTGAACAACCGTTCAACCGGTTCAGACGTTGACCGTCAGAAGTTGCAGGAGAAAGTACGTTCTTCGCTCAACCGTCTGCGTCGTTTAGGCATGGTGTGGTTTATGGGCCACGACAGCAGCAAGTTTCGCATTACCGAATCGGTGTTCCGCTTCGGAGCCGATGTGCGTGCTGGCGACGATCCCCGTGAAGCACAGCGTCGCCTGATTCGTGATGGCGAAGCAATGCCGATTGAAAATCATCTGCAACTCAACGATGAAACCGAAGAGAATCAGCCAGATAGCGGAGAGGAAGAATAA", - "dna_sequence_length": 705, - "functions": [ - "chromosome condensin MukBEF, MukE localization factor" - ], - "id": "CDS_904", - "location": [ - [ - "NC_000913", - 975622, - "+", - 705 - ] - ], - "md5": "6d629ad3e4196ed207c4990eecfd71f7", - "parent_gene": "", - "protein_md5": "bbf5f34fe903483125d29ab15be37248", - "protein_translation": "MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNHAFLMDFQEYLEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYLYLSPERLANEGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLNRLRRLGMVWFMGHDSSKFRITESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQLNDETEENQPDSGEEE", - "protein_translation_length": 234, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0915" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P22523" - ], - [ - "gene_synonym", - "NP_415444.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003138" - ], - [ - "gene_synonym", - "mukB" - ], - [ - "gene_synonym", - "GI:16128891" - ], - [ - "gene_synonym", - "EcoGene:EG10618" - ], - [ - "gene_synonym", - "b0924" - ], - [ - "gene_synonym", - "JW0907" - ], - [ - "gene_synonym", - "GeneID:945549" - ] - ], - "dna_sequence": "ATGATTGAACGCGGTAAATTTCGCTCACTGACGCTGATTAACTGGAACGGCTTTTTTGCCCGAACTTTTGACCTTGACGAGCTGGTCACGACGCTTTCTGGCGGTAACGGGGCGGGTAAATCCACCACCATGGCGGCGTTCGTTACGGCGCTGATCCCCGACCTGACCCTGCTGCATTTCCGTAACACTACGGAAGCCGGGGCCACCAGCGGTTCGCGCGATAAAGGTCTGCACGGTAAGCTGAAAGCGGGTGTCTGTTATTCGATGCTCGACACCATTAACTCGCGCCACCAGCGCGTGGTGGTCGGTGTGCGTCTGCAACAGGTTGCCGGACGCGATCGTAAAGTGGATATCAAGCCGTTTGCCATTCAGGGACTGCCGATGTCGGTGCAGCCGACACAGCTGGTGACCGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACAGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAATTCTATCGTCTGATCGAAGCTTCGCTGTATGGCGGGATCTCCAGTGCCATTACCCGTTCTCTGCGCGACTACCTGTTGCCAGAAAACAGCGGCGTGCGTAAAGCGTTCCAGGACATGGAAGCGGCGCTGCGTGAAAACCGTATGACGCTGGAAGCGATTCGTGTCACCCAGTCGGACCGCGACCTGTTTAAGCATCTGATCAGCGAAGCCACCAACTACGTGGCGGCGGACTACATGCGTCACGCCAACGAGCGCCGTGTCCATCTCGACAAAGCCCTGGAGTTTCGTCGCGAGCTACATACTTCGCGTCAGCAACTGGCGGCTGAGCAGTACAAACACGTCGATATGGCGCGTGAGCTGGCAGAGCACAACGGTGCCGAAGGCGATCTGGAAGCGGATTATCAGGCGGCCAGTGATCACCTGAACCTGGTGCAAACCGCACTGCGTCAGCAGGAGAAGATCGAACGCTACGAAGCGGATCTCGATGAGCTGCAGATCCGTCTGGAAGAGCAAAATGAAGTGGTGGCAGAAGCCATCGAACGCCAGCAAGAGAATGAGGCTCGTGCGGAAGCTGCCGAACTGGAAGTGGACGAGCTGAAAAGCCAGCTTGCTGACTACCAGCAGGCGCTGGACGTCCAGCAAACGCGCGCGATCCAGTATAACCAGGCGATTGCTGCGCTTAATCGTGCCAAAGAACTGTGCCATCTGCCGGACTTAACCGCCGACTGCGCCGCCGAATGGCTGGAAACCTTCCAGGCGAAAGAGCTGGAAGCGACTGAAAAAATGCTCTCTCTTGAGCAGAAAATGAGCATGGCGCAAACCGCGCACAGCCAGTTTGAGCAGGCTTATCAGCTGGTGGTGGCAATCAACGGCCCACTGGCGCGTAACGAGGCGTGGGATGTCGCTCGCGAACTATTGCGCGAAGGGGTCGATCAGCGTCACCTGGCAGAGCAGGTTCAGCCGCTGCGGATGCGATTAAGCGAACTGGAACAGCGTCTACGCGAGCAGCAAGAAGCTGAGCGTCTGCTGGCAGATTTCTGCAAACGTCAGGGCAAGAATTTTGATATCGACGAACTGGAAGCCCTGCATCAGGAACTGGAAGCACGCATTGCCTCTCTTTCCGATAGCGTGTCTAACGCCCGTGAAGAGCGCATGGCACTGCGCCAGGAGCAGGAACAGCTGCAGTCTCGCATTCAGAGTTTGATGCAGCGTGCGCCGGTTTGGCTGGCAGCGCAAAACAGTCTCAACCAGTTGAGCGAACAGTGCGGCGAAGAGTTTACCTCCAGCCAGGACGTCACCGAATATCTGCAACAGTTGCTGGAGCGTGAGCGAGAGGCGATTGTTGAACGCGATGAAGTGGGCGCGCGCAAAAACGCCGTCGATGAAGAGATCGAACGTTTAAGCCAGCCTGGCGGCTCTGAAGATCAGCGTCTGAACGCGCTGGCGGAGCGTTTTGGTGGTGTGCTGCTGTCAGAAATTTATGACGACGTTAGCCTGGAAGATGCGCCGTACTTCTCAGCGCTGTATGGCCCGTCACGCCACGCCATCGTGGTGCCAGATCTGTCACAGGTAACTGAACACCTGGAAGGCTTGACCGATTGCCCGGAAGATCTCTATCTGATCGAAGGAGATCCGCAGTCATTCGATGACAGCGTGTTCAGCGTTGATGAGCTGGAAAAAGCGGTAGTGGTGAAAATCGCCGATCGTCAGTGGCGTTATTCACGTTTCCCGGAAGTGCCGCTGTTTGGTCGTGCTGCGCGTGAAAGCCGTATTGAAAGCCTCCATGCCGAGCGTGAAGTGCTTTCCGAACGCTTCGCCACGCTCTCCTTTGATGTACAGAAAACTCAGCGTCTGCATCAGGCGTTCAGCCGCTTTATCGGCAGTCATCTGGCGGTTGCGTTTGAGTCTGACCCGGAAGCAGAAATCCGTCAACTGAACAGCCGTCGCGTCGAACTGGAGCGGGCGTTAAGTAATCATGAAAATGATAACCAGCAGCAGCGTATTCAGTTTGAGCAGGCGAAAGAGGGCGTTACGGCGCTGAACCGCATTCTGCCGCGTCTCAACCTGTTGGCTGATGACAGCCTGGCGGATCGCGTCGATGAAATCCGCGAACGTCTGGATGAAGCCCAGGAAGCCGCGCGTTTTGTTCAGCAGTTTGGCAATCAACTGGCGAAACTGGAACCGATTGTTTCGGTATTGCAGAGCGACCCGGAACAGTTCGAACAGTTAAAAGAAGATTACGCGTACTCTCAGCAGATGCAGCGCGATGCCCGTCAGCAGGCGTTTGCCCTGACGGAAGTGGTGCAGCGTCGTGCGCACTTTAGCTATTCTGACTCGGCAGAAATGCTTAGCGGTAACAGCGATCTCAACGAAAAACTGCGTGAACGTCTGGAACAGGCGGAAGCGGAGCGTACCCGCGCTCGCGAAGCGTTGCGCGGTCACGCAGCGCAGTTGAGTCAGTACAACCAGGTGCTGGCTTCGCTGAAAAGTTCTTACGACACCAAAAAAGAGCTACTCAACGATCTGCAACGTGAATTGCAGGATATCGGCGTGCGTGCTGATAGCGGGGCAGAAGAGCGGGCGCGTATTCGCCGTGACGAGCTGCATGCGCAACTGAGCAATAACCGTTCACGCCGCAATCAACTGGAAAAAGCGCTTACCTTCTGCGAAGCGGAGATGGACAACCTGACCCGCAAACTGCGCAAGCTGGAGCGGGATTACTTTGAGATGCGCGAGCAGGTAGTGACCGCCAAAGCGGGCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGGCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTATCAGCATCTGCGTGAACGTATTCGTCAGGATATTATTCGTACCGATGATCCGGTGGAAGCTATCGAACAGATGGAGATTGAACTTAGCCGTCTGACCGAAGAATTAACCTCCCGTGAACAGAAACTGGCGATCAGTTCCCGCAGCGTGGCGAACATCATTCGCAAAACCATTCAGCGCGAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGTGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCGGAAGCGCTGGCGAAACTGTATCAACGTCTTAACCCGCAGATTGATATGGGGCAGCGCACGCCGCAGACCATCGGTGAAGAACTGCTGGATTACCGCAACTATCTGGAAATGGAAGTTGAGGTTAACCGTGGTTCCGATGGCTGGCTGCGCGCAGAGTCTGGTGCATTGTCGACCGGTGAGGCGATTGGTACCGGTATGTCGATTCTGGTGATGGTGGTACAAAGCTGGGAAGATGAATCTCGCCGCCTGCGCGGTAAAGATATCTCTCCTTGCCGCCTGCTGTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCAGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCGTCGGCCTGCGAGGATTTGCGCCGCAACTCCCTGAAACGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAA", - "dna_sequence_length": 4461, - "functions": [ - "chromosome condensin MukBEF, ATPase and DNA-binding subunit" - ], - "id": "CDS_905", - "location": [ - [ - "NC_000913", - 976326, - "+", - 4461 - ] - ], - "md5": "177b4f1d4497be7ee9c60f7a013ebc81", - "parent_gene": "", - "protein_md5": "6e4e7443df3aef6e1e4848da69fd8585", - "protein_translation": "MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTMAAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVVGVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAMEGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLRDYLLPENSGVRKAFQDMEAALRENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMRHANERRVHLDKALEFRRELHTSRQQLAAEQYKHVDMARELAEHNGAEGDLEADYQAASDHLNLVQTALRQQEKIERYEADLDELQIRLEEQNEVVAEAIERQQENEARAEAAELEVDELKSQLADYQQALDVQQTRAIQYNQAIAALNRAKELCHLPDLTADCAAEWLETFQAKELEATEKMLSLEQKMSMAQTAHSQFEQAYQLVVAINGPLARNEAWDVARELLREGVDQRHLAEQVQPLRMRLSELEQRLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARIASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTSSQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFGGVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVTEHLEGLTDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAEREVLSERFATLSFDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQLNSRRVELERALSNHENDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRERLDEAQEAARFVQQFGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFALTEVVQRRAHFSYSDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQVLASLKSSYDTKKELLNDLQRELQDIGVRADSGAEERARIRRDELHAQLSNNRSRRNQLEKALTFCEAEMDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADDLRSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAVYQHLRERIRQDIIRTDDPVEAIEQMEIELSRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRMLNQGLQNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLNPQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSILVMVVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPENISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGTDEAPSQAS", - "protein_translation_length": 1486, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0916" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P22525" - ], - [ - "gene_synonym", - "NP_415445.1" - ], - [ - "gene_synonym", - "ycbB" - ], - [ - "gene_synonym", - "GI:16128892" - ], - [ - "gene_synonym", - "EcoGene:EG11253" - ], - [ - "gene_synonym", - "ASAP:ABE-0003142" - ], - [ - "gene_synonym", - "JW0908" - ], - [ - "gene_synonym", - "GeneID:945541" - ], - [ - "gene_synonym", - "b0925" - ], - [ - "gene_synonym", - "ldtD" - ] - ], - "dna_sequence": "ATGTTGCTTAATATGATGTGTGGTCGTCAGCTGTCGGCAATCAGTTTGTGCCTGGCCGTAACATTCGCTCCACTGTTCAATGCGCAGGCCGATGAGCCTGAAGTAATCCCTGGCGACAGCCCGGTGGCTGTCAGTGAACAGGGCGAGGCACTGCCGCAGGCGCAAGCCACGGCAATAATGGCGGGGATCCAGCCATTGCCTGAAGGTGCGGCAGAAAAAGCCCGCACGCAAATCGAATCTCAATTACCCGCAGGTTACAAGCCGGTTTATCTTAACCAGCTTCAACTGTTGTATGCCGCACGCGATATGCAACCCATGTGGGAAAACCGTGATGCTGTTAAAGCCTTCCAGCAACAGCTGGCAGAGGTGGCGATTGCCGGTTTCCAGCCGCAGTTTAATAAATGGGTAGAGTTACTGACCGATCCTGGTGTTAACGGGATGGCACGCGACGTGGTGCTCTCTGATGCGATGATGGGCTATCTCCATTTCATTGCAAATATTCCGGTCAAAGGCACTCGCTGGCTATATAGCAGTAAACCTTATGCACTTGCAACGCCGCCGCTCTCGGTGATTAACCAATGGCAGCTGGCGCTGGATAAAGGTCAATTGCCTACGTTTGTTGCAGGACTGGCACCGCAGCATCCGCAATATGCGGCGATGCATGAATCGTTACTGGCCTTACTCTGTGACACCAAACCGTGGCCCCAACTGACCGGCAAAGCAACGTTGCGCCCAGGGCAGTGGAGTAACGACGTACCGGCGTTGCGCGAAATATTGCAACGCACAGGCATGTTGGACGGGGGGCCGAAAATTACTCTACCTGGCGATGACACGCCAACTGACGCGGTAGTCAGCCCATCCGCTGTTACTGTTGAAACAGCAGAAACTAAGCCGATGGATAAGCAAACGACGTCTCGTAGTAAACCTGCGCCTGCCGTTCGCGCCGCCTACGATAATGAACTGGTGGAAGCCGTTAAACGTTTTCAGGCATGGCAAGGATTGGGGGCAGATGGTGCTATTGGCCCGGCAACACGTGACTGGTTAAACGTAACGCCCGCCCAGCGTGCTGGTGTGTTGGCTCTCAACATCCAGCGATTGCGCTTGCTGCCAACAGAGCTTTCTACCGGGATCATGGTTAACATTCCGGCCTATTCGCTGGTCTACTATCAGAACGGCAATCAGGTGCTGGATTCGCGAGTCATTGTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCACGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAAGCGATTGACCCATGGCAGGTTGACTGGTCTACAATCACGGCCTCGAATTTACCGTTCCGCTTCCAGCAGGCTCCAGGCCCACGGAACTCGCTGGGGCGCTATAAATTCAATATGCCGAGTTCAGAGGCCATTTATTTGCATGACACGCCGAACCACAATCTGTTCAAGCGTGATACACGCGCATTGAGCTCAGGCTGTGTACGAGTGAATAAAGCTTCCGATCTGGCGAATATGCTGTTGCAGGATGCAGGCTGGAATGACAAACGTATTTCTGATGCGCTGAAGCAGGGTGATACACGTTACGTCAATATTCGGCAGTCGATTCCGGTGAATCTCTACTACCTGACGGCCTTTGTTGGTGCAGATGGTCGTACCCAGTATCGTACAGATATTTACAATTATGATCTGCCTGCGCGATCCAGCTCGCAAATCGTATCGAAAGCGGAACAATTAATCAGGTAA", - "dna_sequence_length": 1848, - "functions": [ - "murein L,D-transpeptidase" - ], - "id": "CDS_906", - "location": [ - [ - "NC_000913", - 981047, - "+", - 1848 - ] - ], - "md5": "aa7413b36adecbe019709c0f56a84d39", - "parent_gene": "", - "protein_md5": "0fde8fae184322b4185b396c9a1393ce", - "protein_translation": "MLLNMMCGRQLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAVSEQGEALPQAQATAIMAGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQLAEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGYLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYAAMHESLLALLCDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPARSSSQIVSKAEQLIR", - "protein_translation_length": 615, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415446.1" - ], - [ - "gene_synonym", - "ycbK" - ], - [ - "gene_synonym", - "GeneID:945538" - ], - [ - "gene_synonym", - "GI:16128893" - ], - [ - "gene_synonym", - "ASAP:ABE-0003145" - ], - [ - "gene_synonym", - "JW0909" - ], - [ - "gene_synonym", - "b0926" - ], - [ - "gene_synonym", - "ECK0917" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB06" - ], - [ - "gene_synonym", - "EcoGene:EG13703" - ] - ], - "dna_sequence": "ATGGACAAATTCGACGCTAATCGCCGCAAATTGCTGGCGCTTGGTGGCGTTGCACTCGGTGCCGCCATCCTGCCGACCCCTGCGTTTGCAACACTCTCTACCCCACGCCCGCGCATTTTGACACTCAATAATCTTCATACCGGAGAGTCAATCAAAGCGGAGTTTTTCGATGGCAGAGGCTATATTCAGGAAGAATTGGCAAAACTTAACCATTTTTTCCGCGATTACCGCGCGAACAAAATAAAGTCCATCGACCCAGGATTATTCGACCAGTTGTATCGCCTGCAAGGGTTGTTAGGCACGCGCAAACCGGTGCAACTCATTTCCGGTTATCGTTCTATTGATACCAACAATGAACTACGCGCCCGCAGCCGTGGAGTAGCGAAGAAAAGCTATCACACTAAAGGCCAGGCGATGGATTTCCATATTGAAGGTATCGCGTTAAGCAATATTCGCAAAGCCGCGTTATCTATGCGCGCAGGTGGTGTAGGATATTATCCACGTAGTAACTTTGTGCATATTGATACCGGGCCAGCACGGCACTGGTAG", - "dna_sequence_length": 549, - "functions": [ - "M15A protease-related family periplasmic protein" - ], - "id": "CDS_907", - "location": [ - [ - "NC_000913", - 983075, - "+", - 549 - ] - ], - "md5": "39e78dbb6952899dbee2be12906fcfd8", - "parent_gene": "", - "protein_md5": "679f9d441d38637cd2f65af2dc47cc11", - "protein_translation": "MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQLYRLQGLLGTRKPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPARHW", - "protein_translation_length": 182, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415447.1" - ], - [ - "gene_synonym", - "EcoGene:EG13704" - ], - [ - "gene_synonym", - "ycbL" - ], - [ - "gene_synonym", - "ECK0918" - ], - [ - "gene_synonym", - "GeneID:945551" - ], - [ - "gene_synonym", - "GI:16128894" - ], - [ - "gene_synonym", - "ASAP:ABE-0003147" - ], - [ - "gene_synonym", - "b0927" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75849" - ], - [ - "gene_synonym", - "JW0910" - ] - ], - "dna_sequence": "ATGAACTATCGTATTATTCCGGTCACCGCATTCTCCCAGAACTGTTCATTAATCTGGTGTGAACAAACCCGTCTGGCCGCACTGGTCGATCCTGGCGGCGATGCGGAAAAAATCAAACAGGAAGTTGATGACAGCGGCCTGACACTGATGCAGATCCTGCTGACGCATGGTCATCTGGACCACGTTGGCGCAGCGGCGGAACTGGCGCAACATTACGGCGTGCCGGTTTTCGGCCCGGAAAAAGAAGATGAGTTCTGGCTGCAAGGCTTGCCTGCGCAAAGTCGTATGTTTGGTCTGGAAGAGTGCCAGCCGCTGACGCCAGATCGTTGGCTGAACGAAGGCGATACCATCAGCATAGGGAATGTGACTTTACAGGTGTTACATTGCCCTGGGCATACGCCGGGTCATGTCGTGTTTTTTGATGATCGGGCAAAGCTGCTGATTTCTGGCGATGTTATTTTCAAAGGCGGAGTAGGGCGCAGTGACTTCCCGCGTGGCGATCATAATCAACTGATTTCTTCAATCAAAGATAAATTGCTGCCACTGGGGGATGACGTGATATTTATTCCGGGTCACGGACCATTATCCACACTTGGTTATGAACGCCTGCATAATCCCTTCCTGCAAGACGAAATGCCCGTCTGGTAA", - "dna_sequence_length": 648, - "functions": [ - "putative metal-binding enzyme" - ], - "id": "CDS_908", - "location": [ - [ - "NC_000913", - 983650, - "+", - 648 - ] - ], - "md5": "4d05d9c2f65adcf615a9525da93f014c", - "parent_gene": "", - "protein_md5": "efb6fc75764a33cf4b11b58cea72ca76", - "protein_translation": "MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDDSGLTLMQILLTHGHLDHVGAAAELAQHYGVPVFGPEKEDEFWLQGLPAQSRMFGLEECQPLTPDRWLNEGDTISIGNVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGRSDFPRGDHNQLISSIKDKLLPLGDDVIFIPGHGPLSTLGYERLHNPFLQDEMPVW", - "protein_translation_length": 215, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "aspC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00509" - ], - [ - "gene_synonym", - "NP_415448.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003150" - ], - [ - "gene_synonym", - "b0928" - ], - [ - "gene_synonym", - "EcoGene:EG10096" - ], - [ - "gene_synonym", - "GeneID:945553" - ], - [ - "gene_synonym", - "GI:16128895" - ], - [ - "gene_synonym", - "ECK0919" - ], - [ - "gene_synonym", - "JW0911" - ] - ], - "dna_sequence": "ATGTTTGAGAACATTACCGCCGCTCCTGCCGACCCGATTCTGGGCCTGGCCGATCTGTTTCGTGCCGATGAACGTCCCGGCAAAATTAACCTCGGGATTGGTGTCTATAAAGATGAGACGGGCAAAACCCCGGTACTGACCAGCGTGAAAAAGGCTGAACAGTATCTGCTCGAAAATGAAACCACCAAAAATTACCTCGGCATTGACGGCATCCCTGAATTTGGTCGCTGCACTCAGGAACTGCTGTTTGGTAAAGGTAGCGCCCTGATCAATGACAAACGTGCTCGCACGGCACAGACTCCGGGGGGCACTGGCGCACTACGCGTGGCTGCCGATTTCCTGGCAAAAAATACCAGCGTTAAGCGTGTGTGGGTGAGCAACCCAAGCTGGCCGAACCATAAGAGCGTCTTTAACTCTGCAGGTCTGGAAGTTCGTGAATACGCTTATTATGATGCGGAAAATCACACTCTTGACTTCGATGCACTGATTAACAGCCTGAATGAAGCTCAGGCTGGCGACGTAGTGCTGTTCCATGGCTGCTGCCATAACCCAACCGGTATCGACCCTACGCTGGAACAATGGCAAACACTGGCACAACTCTCCGTTGAGAAAGGCTGGTTACCGCTGTTTGACTTCGCTTACCAGGGTTTTGCCCGTGGTCTGGAAGAAGATGCTGAAGGACTGCGCGCTTTCGCGGCTATGCATAAAGAGCTGATTGTTGCCAGTTCCTACTCTAAAAACTTTGGCCTGTACAACGAGCGTGTTGGCGCTTGTACTCTGGTTGCTGCCGACAGTGAAACCGTTGATCGCGCATTCAGCCAAATGAAAGCGGCGATTCGCGCTAACTACTCTAACCCACCAGCACACGGCGCTTCTGTTGTTGCCACCATCCTGAGCAACGATGCGTTACGTGCGATTTGGGAACAAGAGCTGACTGATATGCGCCAGCGTATTCAGCGTATGCGTCAGTTGTTCGTCAATACGCTGCAGGAAAAAGGCGCAAACCGCGACTTCAGCTTTATCATCAAACAGAACGGCATGTTCTCCTTCAGTGGCCTGACAAAAGAACAAGTGCTGCGTCTGCGCGAAGAGTTTGGCGTATATGCGGTTGCTTCTGGTCGCGTAAATGTGGCCGGGATGACACCAGATAACATGGCTCCGCTGTGCGAAGCGATTGTGGCAGTGCTGTAA", - "dna_sequence_length": 1191, - "functions": [ - "aspartate aminotransferase, PLP-dependent" - ], - "id": "CDS_909", - "location": [ - [ - "NC_000913", - 985709, - "-", - 1191 - ] - ], - "md5": "ecef09c97262e94772a0d74d88658dc2", - "parent_gene": "", - "protein_md5": "378fb80b3f4935dbe3a309d2cca355f1", - "protein_translation": "MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL", - "protein_translation_length": 396, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003153" - ], - [ - "gene_synonym", - "NP_415449.1" - ], - [ - "gene_synonym", - "cmlB" - ], - [ - "gene_synonym", - "EcoGene:EG10671" - ], - [ - "gene_synonym", - "cry" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02931" - ], - [ - "gene_synonym", - "coa" - ], - [ - "gene_synonym", - "GeneID:945554" - ], - [ - "gene_synonym", - "ompF" - ], - [ - "gene_synonym", - "GI:16128896" - ], - [ - "gene_synonym", - "b0929" - ], - [ - "gene_synonym", - "nfxB?" - ], - [ - "gene_synonym", - "JW0912" - ], - [ - "gene_synonym", - "tolF" - ], - [ - "gene_synonym", - "ECK0920" - ] - ], - "dna_sequence": "ATGATGAAGCGCAATATTCTGGCAGTGATCGTCCCTGCTCTGTTAGTAGCAGGTACTGCAAACGCTGCAGAAATCTATAACAAAGATGGCAACAAAGTAGATCTGTACGGTAAAGCTGTTGGTCTGCATTATTTTTCCAAGGGTAACGGTGAAAACAGTTACGGTGGCAATGGCGACATGACCTATGCCCGTCTTGGTTTTAAAGGGGAAACTCAAATCAATTCCGATCTGACCGGTTATGGTCAGTGGGAATATAACTTCCAGGGTAACAACTCTGAAGGCGCTGACGCTCAAACTGGTAACAAAACGCGTCTGGCATTCGCGGGTCTTAAATACGCTGACGTTGGTTCTTTCGATTACGGCCGTAACTACGGTGTGGTTTATGATGCACTGGGTTACACCGATATGCTGCCAGAATTTGGTGGTGATACTGCATACAGCGATGACTTCTTCGTTGGTCGTGTTGGCGGCGTTGCTACCTATCGTAACTCCAACTTCTTTGGTCTGGTTGATGGCCTGAACTTCGCTGTTCAGTACCTGGGTAAAAACGAGCGTGACACTGCACGCCGTTCTAACGGCGACGGTGTTGGCGGTTCTATCAGCTACGAATACGAAGGCTTTGGTATCGTTGGTGCTTATGGTGCAGCTGACCGTACCAACCTGCAAGAAGCTCAACCTCTTGGCAACGGTAAAAAAGCTGAACAGTGGGCTACTGGTCTGAAGTACGACGCGAACAACATCTACCTGGCAGCGAACTACGGTGAAACCCGTAACGCTACGCCGATCACTAATAAATTTACAAACACCAGCGGCTTCGCCAACAAAACGCAAGACGTTCTGTTAGTTGCGCAATACCAGTTCGATTTCGGTCTGCGTCCGTCCATCGCTTACACCAAATCTAAAGCGAAAGACGTAGAAGGTATCGGTGATGTTGATCTGGTGAACTACTTTGAAGTGGGCGCAACCTACTACTTCAACAAAAACATGTCCACCTATGTTGACTACATCATCAACCAGATCGATTCTGACAACAAACTGGGCGTAGGTTCAGACGACACCGTTGCTGTGGGTATCGTTTACCAGTTCTAA", - "dna_sequence_length": 1089, - "functions": [ - "outer membrane porin 1a (Ia;b;F)" - ], - "id": "CDS_910", - "location": [ - [ - "NC_000913", - 986982, - "-", - 1089 - ] - ], - "md5": "f3c7310e860fd594ba07c21fe0efdb15", - "parent_gene": "", - "protein_md5": "3e98eb34c28122df786da07d590a3ad9", - "protein_translation": "MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDSDNKLGVGSDDTVAVGIVYQF", - "protein_translation_length": 362, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "lcs" - ], - [ - "gene_synonym", - "asnS" - ], - [ - "gene_synonym", - "GeneID:945555" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8M0" - ], - [ - "gene_synonym", - "b0930" - ], - [ - "gene_synonym", - "ASAP:ABE-0003162" - ], - [ - "gene_synonym", - "ECK0921" - ], - [ - "gene_synonym", - "EcoGene:EG10094" - ], - [ - "gene_synonym", - "NP_415450.1" - ], - [ - "gene_synonym", - "tss" - ], - [ - "gene_synonym", - "JW0913" - ], - [ - "gene_synonym", - "GI:16128897" - ] - ], - "dna_sequence": "ATGAGCGTTGTGCCTGTAGCCGACGTACTCCAGGGCCGTGTAGCCGTTGACAGCGAAGTCACCGTGCGCGGATGGGTACGTACCCGCCGAGATTCAAAAGCTGGCATCTCCTTCCTCGCCGTTTATGACGGTTCCTGCTTTGATCCTGTACAGGCTGTCATCAATAATTCTCTGCCCAATTACAATGAAGACGTCCTGCGTCTGACCACCGGCTGCTCGGTCATTGTGACGGGTAAAGTCGTGGCGTCGCCGGGCCAGGGGCAACAATTTGAAATTCAGGCCAGCAAGGTTGAAGTTGCTGGTTGGGTTGAAGATCCAGACACTTACCCGATGGCGGCAAAACGCCACAGCATTGAGTATCTGCGTGAAGTCGCTCACCTGCGTCCGCGCACAAACCTGATTGGTGCCGTCGCGCGCGTTCGCCATACGCTGGCGCAGGCGCTGCATCGCTTCTTTAACGAGCAGGGATTCTTCTGGGTTTCAACGCCACTGATTACCGCATCTGATACCGAAGGTGCAGGCGAAATGTTCCGCGTTTCTACGCTGGATCTGGAAAACCTGCCGCGTAACGATCAGGGCAAAGTGGATTTCGACAAAGACTTCTTTGGTAAAGAGTCTTTCCTGACCGTATCTGGCCAGTTGAACGGCGAAACCTACGCTTGCGCATTGTCCAAAATTTATACCTTCGGCCCGACTTTCCGTGCTGAAAACTCCAACACCAGCCGTCACCTGGCGGAATTCTGGATGCTGGAGCCGGAAGTGGCGTTTGCTAACCTGAACGATATTGCGGGTCTGGCTGAAGCCATGCTGAAATATGTCTTCAAAGCGGTTCTCGAAGAACGCGCTGACGACATGAAATTCTTCGCTGAACGCGTAGATAAAGATGCCGTTTCACGTCTGGAACGCTTCATTGAAGCCGATTTTGCGCAGGTGGATTATACCGACGCAGTGACCATTCTCGAAAACTGCGGCAGGAAGTTTGAAAACCCGGTTTACTGGGGAGTCGATCTCTCTTCTGAGCATGAGCGTTATCTGGCGGAAGAACACTTTAAAGCACCGGTAGTGGTTAAAAACTATCCGAAAGATATTAAAGCGTTCTATATGCGCCTTAACGAAGACGGTAAAACCGTTGCGGCTATGGACGTTCTGGCTCCGGGCATCGGTGAGATCATTGGTGGCTCCCAGCGTGAAGAACGTCTGGACGTGCTGGACGAGCGTATGCTGGAAATGGGCCTGAATAAAGAAGATTACTGGTGGTATCGCGATCTGCGTCGCTACGGTACTGTTCCGCATTCAGGTTTCGGTCTTGGTTTTGAACGTCTGATTGCTTACGTAACTGGCGTGCAAAACGTACGTGATGTGATTCCGTTCCCACGTACTCCGCGTAACGCCAGCTTCTAA", - "dna_sequence_length": 1401, - "functions": [ - "asparaginyl tRNA synthetase" - ], - "id": "CDS_911", - "location": [ - [ - "NC_000913", - 988985, - "-", - 1401 - ] - ], - "md5": "b8b843482ba333eb18a8471347376bad", - "parent_gene": "", - "protein_md5": "2d207fb81116741552eeb7ee964cf312", - "protein_translation": "MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNASF", - "protein_translation_length": 466, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415451.1" - ], - [ - "gene_synonym", - "EcoGene:EG10742" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P18133" - ], - [ - "gene_synonym", - "pncB" - ], - [ - "gene_synonym", - "GeneID:946648" - ], - [ - "gene_synonym", - "ASAP:ABE-0003167" - ], - [ - "gene_synonym", - "b0931" - ], - [ - "gene_synonym", - "JW0914" - ], - [ - "gene_synonym", - "GI:16128898" - ], - [ - "gene_synonym", - "ECK0922" - ] - ], - "dna_sequence": "ATGACACAATTCGCTTCTCCTGTTCTGCACTCGTTGCTGGATACAGATGCTTATAAGTTGCATATGCAGCAAGCCGTGTTTCATCACTATTACGATGTGCATGTCGCGGCGGAGTTTCGTTGCCGAGGTGACGATCTGCTGGGTATTTATGCCGATGCTATTCGTGAACAGGTTCAGGCGATGCAGCACCTGCGCCTGCAGGATGATGAATATCAGTGGCTTTCTGCCCTGCCTTTCTTTAAGGCCGACTATCTTAACTGGTTACGCGAGTTCCGCTTTAACCCGGAACAAGTCACCGTGTCCAACGATAATGGCAAGCTGGATATTCGTTTAAGCGGCCCGTGGCGTGAAGTCATCCTCTGGGAAGTTCCTTTGCTGGCGGTTATCAGTGAAATGGTACATCGCTATCGCTCACCGCAGGCCGACGTTGCGCAAGCCCTCGACACGCTGGAAAGCAAATTAGTCGACTTCTCGGCGTTAACCGCCGGTCTTGATATGTCGCGCTTCCATCTGATGGATTTTGGCACCCGTCGCCGTTTTTCTCGCGAAGTACAAGAAACCATCGTTAAGCGTCTGCAACAGGAATCCTGGTTTGTGGGCACCAGCAACTACGATCTGGCGCGTCGGCTTTCCCTCACGCCGATGGGAACACAGGCACACGAATGGTTCCAGGCACATCAGCAAATCAGCCCGGATCTAGCCAACAGCCAGCGAGCTGCACTTGCTGCCTGGCTGGAAGAGTATCCCGACCAACTTGGCATTGCATTAACCGACTGCATCACTATGGATGCTTTCCTGCGTGATTTCGGTGTCGAGTTCGCTAGTCGGTATCAGGGCCTGCGTCATGACTCTGGCGACCCGGTTGAATGGGGTGAAAAAGCCATTGCACATTATGAAAAGCTGGGAATTGATCCACAGAGTAAAACGCTGGTTTTCTCTGACAATCTGGATTTACGCAAAGCGGTTGAGCTATACCGCCACTTCTCTTCCCGCGTGCAATTAAGTTTTGGTATTGGGACTCGCCTGACCTGCGATATCCCCCAGGTAAAACCCCTGAATATTGTCATTAAGTTGGTAGAGTGTAACGGTAAACCGGTGGCGAAACTTTCTGACAGCCCTGGCAAAACTATCTGCCATGATAAAGCGTTTGTTCGGGCGCTGCGCAAAGCGTTCGACCTTCCGCATATTAAAAAAGCCAGTTAA", - "dna_sequence_length": 1203, - "functions": [ - "nicotinate phosphoribosyltransferase" - ], - "id": "CDS_912", - "location": [ - [ - "NC_000913", - 990356, - "-", - 1203 - ] - ], - "md5": "ad76b7c5e4dc01edba3ed2014a351290", - "parent_gene": "", - "protein_md5": "514f423214af8c387dd808100ce010a7", - "protein_translation": "MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGDDLLGIYADAIREQVQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSNDNGKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSALTAGLDMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQAHEWFQAHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASRYQGLRHDSGDPVEWGEKAIAHYEKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPHIKKAS", - "protein_translation_length": 400, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "pepN" - ], - [ - "gene_synonym", - "NP_415452.1" - ], - [ - "gene_synonym", - "GeneID:947253" - ], - [ - "gene_synonym", - "ASAP:ABE-0003171" - ], - [ - "gene_synonym", - "EcoGene:EG10696" - ], - [ - "gene_synonym", - "b0932" - ], - [ - "gene_synonym", - "JW0915" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04825" - ], - [ - "gene_synonym", - "GI:16128899" - ], - [ - "gene_synonym", - "ECK0923" - ] - ], - "dna_sequence": "ATGACTCAACAGCCACAAGCCAAATACCGTCACGATTATCGTGCGCCGGATTACCAGATTACTGATATTGACTTGACCTTTGACCTCGACGCGCAAAAGACGGTCGTTACCGCGGTCAGCCAGGCTGTCCGTCATGGTGCATCAGATGCTCCCCTTCGTCTCAACGGCGAAGACCTCAAACTGGTTTCTGTTCATATTAATGATGAGCCGTGGACCGCCTGGAAAGAAGAAGAGGGCGCACTGGTTATCAGTAATTTGCCGGAGCGTTTTACGCTTAAGATCATTAATGAAATAAGCCCGGCGGCGAATACCGCGCTGGAAGGGCTTTATCAGTCAGGCGATGCGCTTTGCACCCAGTGTGAAGCCGAAGGTTTCCGCCATATTACGTATTATCTCGACCGCCCGGACGTGCTGGCGCGTTTTACCACCAAAATTATTGCCGATAAAATCAAATATCCCTTCCTGCTTTCCAATGGTAACCGCGTTGCGCAAGGCGAACTGGAAAACGGACGCCATTGGGTACAGTGGCAGGACCCGTTCCCGAAACCGTGCTACCTGTTTGCGCTGGTGGCAGGCGACTTTGATGTACTGCGCGATACCTTTACCACGCGTTCTGGTCGCGAAGTAGCACTGGAGCTGTACGTCGATCGCGGCAACCTTGATCGCGCGCCGTGGGCGATGACCTCGCTGAAAAACTCCATGAAATGGGATGAAGAACGCTTTGGCCTGGAGTATGACCTCGACATCTATATGATCGTCGCGGTGGATTTCTTCAATATGGGCGCAATGGAGAATAAGGGGCTGAATATCTTTAACTCCAAATATGTGCTGGCCCGCACCGACACCGCCACCGACAAAGATTACCTCGATATTGAACGCGTTATCGGCCATGAATATTTCCATAACTGGACCGGTAACCGAGTGACCTGTCGCGACTGGTTCCAGCTCAGCCTGAAAGAAGGTTTAACCGTCTTCCGCGATCAGGAGTTCAGCTCTGACCTTGGTTCCCGCGCAGTTAACCGCATCAATAATGTACGCACCATGCGCGGATTGCAGTTTGCAGAAGACGCCAGCCCGATGGCGCACCCGATCCGCCCGGATATGGTCATTGAGATGAACAACTTCTACACCCTGACCGTTTACGAGAAGGGCGCGGAAGTGATTCGCATGATCCACACCCTGCTTGGCGAAGAAAACTTCCAGAAAGGGATGCAGCTTTATTTCGAGCGTCATGATGGTAGTGCAGCGACCTGTGACGACTTTGTGCAGGCGATGGAAGATGCGTCGAATGTCGATCTCTCCCATTTCCGCCGTTGGTACAGCCAGTCCGGTACACCGATTGTGACCGTCAAAGACGACTACAATCCGGAAACCGAGCAGTACACCCTGACCATCAGCCAGCGCACGCCAGCCACGCCGGATCAGGCAGAAAAACAGCCGCTGCATATTCCGTTTGCCATCGAACTGTATGATAACGAAGGCAAAGTGATCCCGTTGCAGAAAGGCGGTCATCCGGTGAATTCCGTGCTGAACGTCACTCAGGCGGAACAGACCTTTGTCTTTGATAATGTCTACTTCCAGCCGGTGCCTGCGCTGCTGTGCGAATTCTCTGCGCCAGTGAAACTGGAATATAAGTGGAGCGATCAGCAACTGACCTTCCTGATGCGTCATGCGCGTAATGATTTCTCCCGCTGGGATGCGGCGCAAAGTTTGCTGGCAACCTACATCAAGCTGAACGTCGCGCGTCATCAGCAAGGTCAGCCGCTGTCTCTGCCGGTGCATGTGGCTGATGCTTTCCGCGCGGTACTGCTTGATGAGAAGATTGATCCAGCGCTGGCGGCAGAAATCCTGACGCTGCCTTCTGTCAATGAAATGGCTGAATTGTTCGATATCATCGACCCGATTGCTATTGCCGAAGTACGCGAAGCACTCACTCGTACTCTGGCGACTGAACTGGCGGATGAGCTACTGGCTATTTACAACGCGAATTACCAGAGCGAGTACCGTGTTGAGCATGAAGATATTGCAAAACGCACTCTGCGTAATGCCTGCCTGCGTTTCCTCGCTTTTGGTGAAACGCATCTGGCTGATGTGCTGGTGAGCAAGCAGTTCCACGAAGCAAACAATATGACTGATGCGCTGGCGGCGCTTTCTGCGGCGGTTGCCGCACAGCTGCCTTGCCGTGACGCGCTGATGCAGGAGTACGACGACAAGTGGCATCAGAACGGTCTGGTGATGGATAAATGGTTTATCCTGCAAGCCACCAGCCCGGCGGCGAATGTGCTGGAGACGGTGCGCGGCCTGTTGCAGCATCGCTCATTTACCATGAGCAACCCGAACCGTATTCGTTCGTTGATTGGCGCGTTTGCGGGCAGCAATCCGGCAGCGTTCCATGCCGAAGATGGCAGCGGTTACCTGTTCCTGGTGGAAATGCTTACCGACCTCAACAGCCGTAACCCGCAGGTGGCTTCACGTCTGATTGAACCGCTGATTCGCCTGAAACGTTACGATGCCAAACGTCAGGAGAAAATGCGCGCGGCGCTGGAACAGTTGAAAGGGCTGGAAAATCTCTCTGGCGATCTGTACGAGAAGATAACTAAAGCACTGGCTTGA", - "dna_sequence_length": 2613, - "functions": [ - "aminopeptidase N" - ], - "id": "CDS_913", - "location": [ - [ - "NC_000913", - 990622, - "+", - 2613 - ] - ], - "md5": "a40999945cc738f743bcf97526f3ab16", - "parent_gene": "", - "protein_md5": "8a2d4bdfd18bf8b30cf5426d05a5b344", - "protein_translation": "MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVRHGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEGALVISNLPERFTLKIINEISPAANTALEGLYQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANYQSEYRVEHEDIAKRTLRNACLRFLAFGETHLADVLVSKQFHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFHAEDGSGYLFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLENLSGDLYEKITKALA", - "protein_translation_length": 870, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12358" - ], - [ - "gene_synonym", - "ECK0924" - ], - [ - "gene_synonym", - "ssuB" - ], - [ - "gene_synonym", - "ycbE" - ], - [ - "gene_synonym", - "b0933" - ], - [ - "gene_synonym", - "NP_415453.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAI1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003173" - ], - [ - "gene_synonym", - "JW0916" - ], - [ - "gene_synonym", - "GI:16128900" - ], - [ - "gene_synonym", - "GeneID:947220" - ] - ], - "dna_sequence": "ATGAATACTGCTCGTCTGAACCAGGGCACGCCATTGTTGCTCAATGCAGTAAGCAAACATTACGCGGAAAATATCGTCCTGAACCAACTGGATTTACATATTCCGGCAGGTCAGTTTGTGGCGGTGGTGGGCCGCAGCGGTGGTGGCAAAAGTACCCTGCTGCGCCTGCTGGCAGGTCTGGAAACGCCAACCGCAGGCGATGTGTTAGCGGGCACCACACCGCTGGCTGAAATTCAGGAAGACACGCGAATGATGTTTCAGGATGCGCGTCTGCTACCGTGGAAATCGGTGATTGATAACGTTGGGTTAGGCCTTAAAGGCCAGTGGCGCGATGCCGCACGTCGAGCGTTGGCTGCGGTAGGACTGGAGAATCGCGCAGGGGAATGGCCTGCCGCACTTTCTGGCGGGCAGAAACAGCGAGTGGCGCTGGCAAGAGCGTTGATTCATCGACCGGGATTATTGTTGCTTGATGAACCGCTCGGGGCGCTGGACGCCTTAACGCGACTCGAGATGCAGGATTTGATTGTGTCACTTTGGCAGGAGCACGGCTTTACCGTACTGTTGGTGACGCATGATGTGAGCGAAGCGGTAGCGATGGCTGACCGGGTGCTGTTAATTGAAGAGGGAAAAATTGGTCTGGATTTGACAGTGGATATCCCCCGTCCGCGTCGATTAGGGTCGGTGCGATTAGCGGAGCTGGAAGCGGAGGTGTTGCAACGGGTGATGCAACGTGGTGAATCTGAAACTCGCCTGAGAAAACAGGGGTAA", - "dna_sequence_length": 768, - "functions": [ - "aliphatic sulfonate ABC transporter ATPase" - ], - "id": "CDS_914", - "location": [ - [ - "NC_000913", - 994044, - "-", - 768 - ] - ], - "md5": "0be0c2688458da76af228fbc0b8e93e2", - "parent_gene": "", - "protein_md5": "25bd22e9b5cb6c0d4d982cb7db274698", - "protein_translation": "MNTARLNQGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTPLAEIQEDTRMMFQDARLLPWKSVIDNVGLGLKGQWRDAARRALAAVGLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRLEMQDLIVSLWQEHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVDIPRPRRLGSVRLAELEAEVLQRVMQRGESETRLRKQG", - "protein_translation_length": 255, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415454.4" - ], - [ - "gene_synonym", - "ssuC" - ], - [ - "gene_synonym", - "ycbM" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75851" - ], - [ - "gene_synonym", - "GeneID:947216" - ], - [ - "gene_synonym", - "EcoGene:EG13705" - ], - [ - "gene_synonym", - "GI:90111188" - ], - [ - "gene_synonym", - "b0934" - ], - [ - "gene_synonym", - "ECK0925" - ], - [ - "gene_synonym", - "ASAP:ABE-0003175" - ], - [ - "gene_synonym", - "JW5121" - ] - ], - "dna_sequence": "ATGGCAACGCCAGTGAAGAAGTGGTTATTGCGCGTTGCCCCCTGGTTTTTACCGGTGGGCATCGTGGCGGTGTGGCAACTGGCCTCCTCGGTTGGCTGGCTGTCGACGCGTATTTTGCCTTCACCGGAAGGAGTGGTGACGGCGTTCTGGACGCTCTCCGCCAGCGGCGAACTGTGGCAGCATCTGGCGATCAGCTCCTGGCGGGCGCTGATTGGCTTTTCAATTGGCGGATCGCTGGGGTTGATTTTGGGACTGATTAGCGGGCTATCTCGCTGGGGAGAACGGCTGCTGGATACCTCAATTCAGATGTTGCGCAACGTGCCGCATCTGGCGCTGATCCCGCTGGTGATTTTGTGGTTTGGCATTGATGAATCCGCAAAAATCTTTCTGGTGGCGCTCGGTACGCTATTCCCCATTTATATCAACACCTGGCATGGCATCCGTAATATCGATCGCGGGTTGGTGGAGATGGCGCGTAGCTATGGATTATCCGGCATACCGCTGTTTATCCATGTGATCCTGCCTGGTGCCCTGCCCTCAATTATGGTCGGCGTGCGTTTTGCGTTGGGCCTGATGTGGCTGACGCTGATTGTTGCCGAAACCATTTCTGCCAATTCAGGCATTGGTTATCTGGCGATGAATGCGCGGGAGTTTTTGCAAACGGACGTGGTGGTAGTCGCTATTATTCTTTACGCCCTGCTCGGCAAACTGGCTGACGTCAGCGCGCAGCTGTTAGAGCGCCTCTGGTTGCGCTGGAACCCGGCTTATCATTTGAAGGAGGCCACGGTATGA", - "dna_sequence_length": 792, - "functions": [ - "aliphatic sulfonate ABC transporter permease" - ], - "id": "CDS_915", - "location": [ - [ - "NC_000913", - 994832, - "-", - 792 - ] - ], - "md5": "f027ab2d2edd848e8f7c1d8489ec5574", - "parent_gene": "", - "protein_md5": "db0e6bc8c6fbb2d443fc241427af538d", - "protein_translation": "MATPVKKWLLRVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRALIGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWLRWNPAYHLKEATV", - "protein_translation_length": 263, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ssuD" - ], - [ - "gene_synonym", - "ycbN" - ], - [ - "gene_synonym", - "NP_415455.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P80645" - ], - [ - "gene_synonym", - "ASAP:ABE-0003178" - ], - [ - "gene_synonym", - "GeneID:945557" - ], - [ - "gene_synonym", - "JW0918" - ], - [ - "gene_synonym", - "b0935" - ], - [ - "gene_synonym", - "ssi6" - ], - [ - "gene_synonym", - "ECK0926" - ], - [ - "gene_synonym", - "EcoGene:EG13706" - ], - [ - "gene_synonym", - "GI:16128902" - ] - ], - "dna_sequence": "ATGAGTCTGAATATGTTCTGGTTTTTACCGACCCACGGTGACGGGCATTATCTGGGAACGGAAGAAGGTTCACGCCCGGTTGATCACGGTTATCTGCAACAAATTGCGCAAGCGGCGGATCGTCTTGGCTATACCGGTGTGCTAATTCCAACGGGGCGCTCCTGCGAAGATGCGTGGCTGGTTGCCGCATCGATGATCCCGGTGACGCAGCGGCTGAAGTTTCTTGTCGCCCTGCGTCCCAGCGTAACCTCACCTACCGTTGCCGCCCGCCAGGCCGCCACGCTTGACCGTCTCTCAAATGGACGTGCGTTGTTTAACCTGGTCACAGGCAGCGATCCACAAGAGCTGGCAGGCGACGGAGTGTTCCTTGATCATAGCGAGCGCTACGAAGCCTCGGCGGAATTTACCCAGGTCTGGCGGCGTTTATTGCAGAGAGAAACCGTCGATTTCAACGGTAAACATATTCATGTGCGCGGAGCAAAACTGCTCTTCCCGGCGATTCAACAGCCGTATCCGCCACTTTACTTTGGCGGATCGTCAGATGTCGCCCAGGAGCTGGCGGCAGAACAGGTTGATCTCTACCTCACCTGGGGCGAACCGCCGGAACTGGTTAAAGAGAAAATCGAACAAGTGCGGGCGAAAGCTGCCGCGCATGGACGCAAAATTCGTTTCGGTATTCGTCTGCATGTGATTGTTCGTGAAACTAACGACGAAGCGTGGCAGGCCGCCGAGCGGTTAATCTCGCATCTTGATGATGAAACTATCGCCAAAGCACAGGCCGCATTCGCCCGGACGGATTCCGTAGGGCAACAGCGAATGGCGGCGTTACATAACGGCAAGCGCGACAATCTGGAGATCAGCCCCAATTTATGGGCGGGCGTTGGCTTAGTGCGCGGCGGTGCCGGGACGGCGCTGGTGGGCGATGGTCCTACGGTCGCTGCGCGAATCAACGAATATGCCGCGCTTGGCATCGACAGTTTTGTGCTTTCGGGCTATCCGCATCTGGAAGAAGCGTATCGGGTTGGCGAGTTGCTGTTCCCGCTTCTGGATGTCGCCATCCCGGAAATTCCCCAGCCGCAGCCGCTGAATCCGCAAGGCGAAGCGGTGGCGAATGATTTTATCCCCCGTAAAGTCGCGCAAAGCTAA", 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"NP_415456.4" - ], - [ - "gene_synonym", - "JW0919" - ], - [ - "gene_synonym", - "b0936" - ], - [ - "gene_synonym", - "GI:90111189" - ], - [ - "gene_synonym", - "ECK0927" - ], - [ - "gene_synonym", - "ASAP:ABE-0003180" - ], - [ - "gene_synonym", - "EcoGene:EG13707" - ] - ], - "dna_sequence": "ATGCGTAACATCATTAAACTGGCGCTGGCGGGATTGCTTAGCGTCTCTACTTTTGCGGTTGCTGCAGAATCCTCGCCTGAAGCGTTACGTATAGGCTATCAGAAAGGCAGTATTGGTATGGTGCTGGCAAAAAGCCACCAGTTACTGGAAAAACGCTATCCGGAATCAAAAATCTCCTGGGTGGAGTTCCCCGCGGGTCCGCAAATGTTGGAAGCGTTAAACGTTGGCAGTATTGATCTCGGCAGTACCGGGGATATTCCGCCAATCTTTGCCCAGGCTGCCGGGGCTGATTTGGTGTACGTGGGCGTCGAGCCACCGAAGCCCAAAGCCGAAGTGATTCTGGTGGCAGAAAACAGCCCGATCAAAACCGTAGCCGATCTTAAAGGTCACAAAGTTGCCTTTCAGAAAGGTTCCAGTTCACACAACCTTTTACTGCGTGCACTGCGTCAGGCCGGACTTAAGTTTACCGATATCCAACCCACTTACCTGACGCCCGCTGATGCCCGCGCCGCGTTCCAGCAAGGTAACGTTGACGCCTGGGCTATCTGGGATCCCTACTACTCTGCTGCATTATTACAGGGCGGCGTGCGGGTGCTGAAAGACGGCACCGATCTCAATCAAACTGGATCGTTTTATCTGGCAGCTCGTCCCTATGCAGAAAAAAACGGCGCTTTTATTCAGGGCGTACTGGCAACCTTTAGTGAGGCCGATGCGTTAACCCGCAGCCAGCGCGAGCAAAGCATCGCTTTACTGGCAAAAACGATGGGCTTACCGGCACCGGTGATTGCCTCTTACTTAGATCATCGCCCTCCTACCACCATCAAACCGGTTAACGCCGAGGTTGCCGCCTTACAGCAGCAAACGGCAGATCTGTTTTATGAAAATCGTCTGGTGCCGAAAAAAGTCGATATTCGCCAGCGCATCTGGCAGCCCACTCAACTGGAAGGAAAACAATTATGA", - "dna_sequence_length": 960, - "functions": [ - "aliphatic sulfonate ABC transporter periplasmic binding protein" - ], - "id": "CDS_917", - "location": [ - [ - "NC_000913", - 996944, - "-", - 960 - ] - ], - "md5": "491fac9b3990f2c7b498699ba8c1b76a", - "parent_gene": "", - "protein_md5": "1bfb9032a7a4df03d61ec4efa5cb0546", - "protein_translation": "MRNIIKLALAGLLSVSTFAVAAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPESKISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKVDIRQRIWQPTQLEGKQL", - "protein_translation_length": 319, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ssuE" - ], - [ - "gene_synonym", - "EcoGene:EG13708" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P80644" - ], - [ - "gene_synonym", - "GeneID:945947" - ], - [ - "gene_synonym", - "GI:16128904" - ], - [ - "gene_synonym", - "NP_415457.1" - ], - [ - "gene_synonym", - "b0937" - ], - [ - "gene_synonym", - "ssi4" - ], - [ - "gene_synonym", - "ASAP:ABE-0003182" - ], - [ - "gene_synonym", - "ECK0928" - ], - [ - "gene_synonym", - "JW0920" - ], - [ - "gene_synonym", - "ycbP" - ] - ], - "dna_sequence": "ATGCGTGTCATCACCCTGGCGGGTAGTCCTCGCTTTCCTTCTCGCTCCAGCTCCTTGCTGGAATATGCGCGGGAAAAACTAAATGGCCTGGATGTAGAGGTTTATCACTGGAATCTGCAAAACTTCGCCCCGGAAGATCTACTTTATGCTCGTTTCGATAGTCCGGCACTCAAGACCTTCACCGAACAGCTGCAACAGGCCGATGGGCTGATTGTCGCCACGCCTGTGTATAAAGCCGCCTATTCCGGTGCGTTGAAAACCCTGCTCGACCTGCTGCCAGAACGCGCTTTGCAAGGCAAAGTGGTGCTACCGCTGGCGACGGGCGGTACCGTGGCCCATCTGCTGGCGGTCGATTATGCCCTTAAACCAGTTTTAAGCGCACTGAAAGCTCAGGAGATCCTGCACGGCGTGTTTGCCGATGACTCACAAGTAATTGATTACCATCACAGACCCCAGTTCACGCCAAATCTGCAAACCCGTCTTGATACCGCGCTAGAAACTTTCTGGCAGGCATTGCACCGCCGCGATGTTCAGGTTCCTGACCTTCTGTCTCTGCGAGGTAATGCCCATGCGTAA", - "dna_sequence_length": 576, - "functions": [ - "NAD(P)H-dependent FMN reductase" - ], - "id": "CDS_918", - "location": [ - [ - "NC_000913", - 997512, - "-", - 576 - ] - ], - "md5": "f75d3b5d679bd9b999a86d6ee19d3cf2", - "parent_gene": "", - "protein_md5": "6afd28a89336f8a5bdb073bf57c66710", - "protein_translation": "MRVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFAPEDLLYARFDSPALKTFTEQLQQADGLIVATPVYKAAYSGALKTLLDLLPERALQGKVVLPLATGGTVAHLLAVDYALKPVLSALKAQEILHGVFADDSQVIDYHHRPQFTPNLQTRLDTALETFWQALHRRDVQVPDLLSLRGNAHA", - "protein_translation_length": 191, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ycbQ" - ], - [ - "gene_synonym", - "GeneID:948306" - ], - [ - "gene_synonym", - "elfA" - ], - [ - "gene_synonym", - "EcoGene:EG13709" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75855" - ], - [ - "gene_synonym", - "ASAP:ABE-0003185" - ], - [ - "gene_synonym", - "NP_415458.2" - ], - [ - "gene_synonym", - "ECK0929" - ], - [ - "gene_synonym", - "GI:90111190" - ], - [ - "gene_synonym", - "b0938" - ], - [ - "gene_synonym", - "JW5122" - ] - ], - "dna_sequence": "ATGAAAAAAAGTGTATTGACGGCGTTTATAACTGTGGTATGTGCAACGTCCAGCGTTATGGCTGCTGATGATAATGCTATCACGGATGGCTCAGTAACATTTAATGGTAAAGTTATTGCTCCAGCTTGTACCCTGGTAGCTGCGACGAAAGATTCCGTGGTGACTTTGCCAGATGTTAGTGCCACGAAGTTGCAAACCAATGGTCAGGTTTCTGGCGTGCAAATTGATGTGCCAATTGAATTAAAAGATTGTGATACTACCGTAACAAAAAATGCAACGTTCACCTTTAATGGCACTGCGGATACTACTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATATCGCTACGGGGAAAGCGACTTCAGGTAATGTGAATGCGGTAACAAATTTCCATATTAACTATTATTAA", - "dna_sequence_length": 540, - "functions": [ - "laminin-binding fimbrin subunit" - ], - "id": "CDS_919", - "location": [ - [ - "NC_000913", - 997868, - "+", - 540 - ] - ], - "md5": "edd86e2d8ae07be65074e24a60d00eca", - "parent_gene": "", - "protein_md5": "21bd1ac51cf61c7416d9bff6ef4be505", - "protein_translation": "MKKSVLTAFITVVCATSSVMAADDNAITDGSVTFNGKVIAPACTLVAATKDSVVTLPDVSATKLQTNGQVSGVQIDVPIELKDCDTTVTKNATFTFNGTADTTQITAFANQASSDAATNVALQMYMNDGTTAITPDTETGNILLQDGDQTLTFKVDYIATGKATSGNVNAVTNFHINYY", - "protein_translation_length": 179, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13710" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75856" - ], - [ - "gene_synonym", - "elfD" - ], - [ - "gene_synonym", - "NP_415459.1" - ], - [ - "gene_synonym", - "GI:16128906" - ], - [ - "gene_synonym", - "ASAP:ABE-0003187" - ], - [ - "gene_synonym", - "ycbR" - ], - [ - "gene_synonym", - "b0939" - ], - [ - "gene_synonym", - "GeneID:946773" - ], - [ - "gene_synonym", - "ECK0930" - ], - [ - "gene_synonym", - "JW0922" - ] - ], - "dna_sequence": "ATGAAAACTTGCATAACAAAGGGAATTGTGACCGTAAGTTTAACGGCAATATTACTCAGCTGCTCATCCGCATGGGCGGCAGGTAAAGGCGGGATTGGACTTGCAGCAACACGTCTTGTTTATTCAGAAGGTGAAGAGCAAATTTCACTGGGTGTACGTAACACCAGTCCGGATGTTCCTTATCTTATTCAGTCATGGGTGATGACCCCAGATAATAAAAAATCAGCAGACTTTATTATTACACCACCGCTATTTGTGCTGAATCCGGCAAATGAGAATCTGTTACGCATTATGTACATTGGAGCGCCGTTGGCGAAAGACAGAGAAACCCTTTTCTTCACTAGCGTACGGGCAGTCCCTTCAACAACGAAGCGGAAAGAGGGAAATACCCTGAAGATTGCCACACAAAGCGTCATCAAACTTTTCTGGCGACCAAAAGGTTTAGCGTATCCCTTAGGCGAGGCTCCGGCGAAACTGCGTTGCACTTCGTCAGCTGACATGGTTACGGTCAGTAACCCAACACCTTATTTCATTACCCTGACAGACCTGAAAATAGGTGGAAAAGTAGTTAAAAATCAAATGATTTCCCCCTTTGATAAATACCAATTTTCTCTGCCAAAGGGGGCCAAAAATAGCAGCGTAACGTATCGAACCATCAATGACTACGGGGCGGAAACGCCGCAACTCAACTGTAAATCGTAA", - "dna_sequence_length": 702, - "functions": [ - "putative periplasmic pilin chaperone" - ], - "id": "CDS_920", - "location": [ - [ - "NC_000913", - 998490, - "+", - 702 - ] - ], - "md5": "f34508a49ee5b676bfd287d2e4f88c99", - "parent_gene": "", - "protein_md5": "73ccc6a4209edad5a10c44b92e065f92", - "protein_translation": "MKTCITKGIVTVSLTAILLSCSSAWAAGKGGIGLAATRLVYSEGEEQISLGVRNTSPDVPYLIQSWVMTPDNKKSADFIITPPLFVLNPANENLLRIMYIGAPLAKDRETLFFTSVRAVPSTTKRKEGNTLKIATQSVIKLFWRPKGLAYPLGEAPAKLRCTSSADMVTVSNPTPYFITLTDLKIGGKVVKNQMISPFDKYQFSLPKGAKNSSVTYRTINDYGAETPQLNCKS", - "protein_translation_length": 233, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128907" - ], - [ - "gene_synonym", - "EcoGene:EG13711" - ], - [ - "gene_synonym", - "elfC" - ], - [ - "gene_synonym", - "NP_415460.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003189" - ], - [ - "gene_synonym", - "GeneID:946934" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75857" - ], - [ - "gene_synonym", - "ycbS" - ], - [ - "gene_synonym", - "b0940" - ], - [ - "gene_synonym", - "JW0923" - ], - [ - "gene_synonym", - "ECK0931" - ] - ], - "dna_sequence": "ATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGTGTCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAGATGATCCCTCAATGGTGGCCGATTTGTCTCGTTTCGAAAAAGGACAAAAAATAACGCCAGGGGTTTATCGTGTCGATATTGTTCTGAATCAGACAATTGTAGATACGCGCAACGTCAATTTTGTTGAGATAACGCCAGAGAAGGGGATTGCCGCCTGTTTGACGACTGAAAGCCTGGATGCAATGGGTGTTAATACTGATGCGTTTCCGGCTTTTAAACAACTGGACAAACAAGCGTGTGTGCCATTGGCGGAGATTATTCCGGATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGTGGTTATGTCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTATTCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTCTGAATTTAAACAGTGGCGTTAATTTAGGCCCATGGAGATTGCGCAACAATTCAACATGGAGTCGTAGTAGTGGCCAAACCGCAGAATGGAAGAATCTCAGCAGCTATTTGCAACGGGCGGTTATTCCTCTGAAAGGCGAACTGACCGTAGGTGATGATTATACTGCAGGCGATTTTTTCGATAGTGTCAGCTTTCGTGGTGTGCAGCTGGCGTCAGATGACAACATGCTGCCAGACAGCCTGAAAGGGTTTGCGCCTGTGGTGCGTGGTATCGCCAAAAGCAATGCCCAGATAACGATTAAGCAAAATGGTTACACCATTTACCAAACTTATGTATCGCCTGGTGCTTTTGAAATTAGTGATCTCTATTCCACGTCGTCGAGCGGTGATTTGTTAGTTGAAATCAAAGAAGCGGACGGCAGCGTCAATAGCTACAGCGTACCGTTCTCCAGTGTGCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATAGTAATGAACAGCAGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACCTGGTATGGTGGTGGACAATATGCTGAATATTACCGTGCCGCCATGTTTGGTCTGGGATTTAACCTCGGCGATTTCGGAGCAATTTCGTTCGATGCGACCCAGGCGAAGAGTACGCTAGCAGATCAAAGCGAACATAAAGGTCAGTCATATCGTTTTCTGTATGCCAAAACGCTCAACCACTTGGGCACTAACTTTCAATTGATGGGCTATCGCTATTCGACGTCGGGTTTCTACACCCTTTCCGACACCATGTATAAACATATGGATGGCTACGAATTTAATGACGGTGATGATGAAGATACGCCGATGTGGTCGCGTTATTACAATTTGTTTTACACCAAACGTGGCAAACTGCAGGTCAATATCTCCCAGCAATTAGGCGAGTACGGTTCGTTTTATTTAAGTGGTAGCCAGCAAACTTACTGGCATACGGATCAACAGGATCGGCTATTACAGTTTGGCTACAACACGCAAATTAAAGATCTTTCGCTGGGGATTTCCTGGAACTACAGTAAGTCCCGTGGTCAACCTGATGCTGATCAGGTGTTTGCTCTAAATTTTTCCCTGCCGCTCAATCTGTTGCTCCCCAGAAGTAATGATAGCTATACCAGGAAAAAAAATTACGCCTGGATGACCTCTAACACCAGTATCGATAACGAAGGGCACACTACACAAAACCTGGGTTTAACGGAGACATTACTCGATGACGGTAACCTGAGCTACAGCGTGCAACAGGGATATAACAGCGAGGGGAAAACGGCTAATGGTAGCGCCAGCATGGATTACAAAGGGGCGTTTGCGGATGCCCGAGTGGGCTACAACTACAGCGATAACGGCAGTCAACAACAACTGAACTACGCTCTTTCAGGCAGTTTAGTTGCCCATTCACAGGGCATTACCCTGGGGCAATCGCTGGGGGAAACTAACGTTCTGATTGCAGCACCAGGCGCAGAGAATACTCGTGTGGCGAACAGCACCGGGCTGAAAACTGACTGGCGCGGATATACCGTTGTTCCTTATGCCACTTCTTATCGGGAAAATCGAATCGCACTTGATGCGGCGTCGTTAAAACGTAACGTGGATCTTGAAAATGCAGTAGTCAACGTGGTTCCCACCAAAGGGGCGTTGGTTCTGGCGGAGTTCAATGCCCATGCGGGTGCAAGGGTATTAATGAAAACATCAAAGCAGGGTATACCGCTGCGTTTTGGCGCGATAGCGACGCTGGACGGCGTACAGGCTAATAGCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCTCCCGATCAAATTTGTCATATCAATTACGAGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAA", - "dna_sequence_length": 2601, - "functions": [ - "putative outer membrane fimbrial subunit export usher protein" - ], - "id": "CDS_921", - "location": [ - [ - "NC_000913", - 999216, - "+", - 2601 - ] - ], - "md5": "dff34b1cbf2e492cf1f67949f2a2f4dc", - "parent_gene": "", - "protein_md5": "4e576e5dead09753b4c927bba256175c", - "protein_translation": "MYRTHRQHSLLSSGGVPSFIGGLVVFVSAAFNAQAETWFDPAFFKDDPSMVADLSRFEKGQKITPGVYRVDIVLNQTIVDTRNVNFVEITPEKGIAACLTTESLDAMGVNTDAFPAFKQLDKQACVPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNARGYVPPERWDEGINALLLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNSTWSRSSGQTAEWKNLSSYLQRAVIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWYGGGQYAEYYRAAMFGLGFNLGDFGAISFDATQAKSTLADQSEHKGQSYRFLYAKTLNHLGTNFQLMGYRYSTSGFYTLSDTMYKHMDGYEFNDGDDEDTPMWSRYYNLFYTKRGKLQVNISQQLGEYGSFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLSLGISWNYSKSRGQPDADQVFALNFSLPLNLLLPRSNDSYTRKKNYAWMTSNTSIDNEGHTTQNLGLTETLLDDGNLSYSVQQGYNSEGKTANGSASMDYKGAFADARVGYNYSDNGSQQQLNYALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVANSTGLKTDWRGYTVVPYATSYRENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVLMKTSKQGIPLRFGAIATLDGVQANSGIIDDDGSLYMAGLPAKGTISVRWGEAPDQICHINYELTEQQINSAITRMDAICR", - "protein_translation_length": 866, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415461.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75858" - ], - [ - "gene_synonym", - "EcoGene:EG13712" - ], - [ - "gene_synonym", - "elfG" - ], - [ - "gene_synonym", - "GI:16128908" - ], - [ - "gene_synonym", - "ECK0932" - ], - [ - "gene_synonym", - "ASAP:ABE-0003191" - ], - [ - "gene_synonym", - "b0941" - ], - [ - "gene_synonym", - "JW0924" - ], - [ - "gene_synonym", - "GeneID:947185" - ], - [ - "gene_synonym", - "ycbT" - ] - ], - "dna_sequence": "ATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTTTTGCCGCCGTCTTAATGTTATGGTGCGCTCAAACCGCTGCTTATAGCGGGCAGTGTCATACTACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGGAGGAAGAAGCAAATACGGCAGGGGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTCCTGTGATTGCGATAAAGACAATGTCAGAAGTGGCCGATGGGCATTCGCCGCGGATTCACCGTTAGTCTATTTAGGCGACAACTGGTACAAAATTAATGACTATCTTGCCGCCAAAGTTTTATTGCAGGTTAAAGGCAGTTCTCCTACTGCGGTTCCTTTCGAAAACGTGGGCACAGGGGGGGATACCCGATGGCATATTTGCGACCCTGGCGGTCAACGTTTAGGTGGGCAGGGGGCAAGCGGTAATAGCGGTAGCTTTTCCCTGAAAATATTGCAGCCGTTCGTTGGCTCGGTCGTCATTCCTCCTATGGCGCTGGCGCGATTATATGAATGCTACAACATACCCGCAGGTGATTCCTGCACGACTACAGGTACACCGGTTTTAGTGTATTACCTGTCTGGTACGATCAATTCACTTGGCTCATGTTCCGTCAATGCCGGAGAGACAATTGAAGTTGATTTAGGTGATGTCTTCGCTGCCAATTTCCGTGTTGTAGGGCATAAACCTCTTGGGGCCAGAACGGCAGAACTTGCAATTCCAGTCAGGTGTAACACGGGAAACGCGGGATTAGTTAATGTCAACCTGAGTCTGACGGCAACCACAGACCCCAGCTATCCCCAGGCGATTAAGACGTCACGTCCTGGCGTGGGCGTGGTGGTGACCGATAGCCAGAACAACATTATTTCCCCTGCTGGTGGAACATTACCGCTCTCTATTCCTGATGATGCAGACAGTATCGCGCGAATGAATGTCTATCCAGTCAGCACGACAGGTGTACCACCAGAAACCGGGCGATTTGAAGCCACGGCAACGGTGAGAATAAATTTTGATTAA", - "dna_sequence_length": 1071, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_922", - "location": [ - [ - "NC_000913", - 1001807, - "+", - 1071 - ] - ], - "md5": "1f2033de8d462ee2ea0488bfa1388f68", - "parent_gene": "", - "protein_md5": "cf079588ac9e188e43b7c50a971b4474", - "protein_translation": "MQIIFGEKCVSLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYIGVNFGVKTLEEEANTAGVVKDKFYQWNESNDYYVSCDCDKDNVRSGRWAFAADSPLVYLGDNWYKINDYLAAKVLLQVKGSSPTAVPFENVGTGGDTRWHICDPGGQRLGGQGASGNSGSFSLKILQPFVGSVVIPPMALARLYECYNIPAGDSCTTTGTPVLVYYLSGTINSLGSCSVNAGETIEVDLGDVFAANFRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSLTATTDPSYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPDDADSIARMNVYPVSTTGVPPETGRFEATATVRINFD", - "protein_translation_length": 356, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75859" - ], - [ - "gene_synonym", - "EcoGene:EG13713" - ], - [ - "gene_synonym", - "GeneID:945561" - ], - [ - "gene_synonym", - "ycbU" - ], - [ - "gene_synonym", - "ASAP:ABE-0003193" - ], - [ - "gene_synonym", - "GI:16128909" - ], - [ - "gene_synonym", - "b0942" - ], - [ - "gene_synonym", - "NP_415462.1" - ], - [ - "gene_synonym", - "JW0925" - ], - [ - "gene_synonym", - "ECK0933" - ] - ], - "dna_sequence": "ATGAAGAAAAAAACGATATTTCAGTGCGTTATCTTGTTCTTTAGCATTCTTAACATCCATGTCGGGATGGCTGGGCCTGAACAAGTTAGTATGCATATTTATGGGAATGTGGTCGATCAGGGCTGTGATGTCGCCACCAAAAGTGCATTACAAAATATTCATATTGGTGATTTTAATATCAGTGATTTTCAGGCCGCGAATACCGTAAGCACTGCTGCTGATTTGAATATCGATATCACCGGTTGTGCCGCTGGTATTACTGGCGCGGACGTCCTTTTTAGCGGCGAGGCTGACACCCTTGCGCCGACACTGCTCAAACTAACTGACACAGGCGGAAGCGGTGGTATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCGTTATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGA", - "dna_sequence_length": 543, - "functions": [ - "putative fimbriae protein" - ], - "id": "CDS_923", - "location": [ - [ - "NC_000913", - 1002889, - "+", - 543 - ] - ], - "md5": "06985a1b327f3fbcdfc48c44d331a48d", - "parent_gene": "", - "protein_md5": "a4f4dea78477e0cad4ffd10432617020", - "protein_translation": "MKKKTIFQCVILFFSILNIHVGMAGPEQVSMHIYGNVVDQGCDVATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAPTLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKSTKAGATGGNATAVLYFDLVYQ", - "protein_translation_length": 180, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13714" - ], - [ - "gene_synonym", - "NP_415463.2" - ], - [ - "gene_synonym", - "ycbV" - ], - [ - "gene_synonym", - "GeneID:945562" - ], - [ - "gene_synonym", - "GI:90111191" - ], - [ - "gene_synonym", - "ASAP:ABE-0003195" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75860" - ], - [ - "gene_synonym", - "ECK0934" - ], - [ - "gene_synonym", - "b0943" - ], - [ - "gene_synonym", - "JW5123" - ] - ], - "dna_sequence": "ATGTTGAAACGGATAATCTGGATTCTGTTCTTATTGGGATTAACGTGGGGCTGTGAGCTATTTGCCCATGATGGCACGGTCAACATTAGCGGATCGTTTCGCCGTAATACATGCGTGCTGGCACAGGATAGCAAGCAAATCAATGTGCAGTTAGGCGATGTCTCGCTGACACGTTTTTCTCATGGGAATTATGGCCCGGAGAAATCTTTCATCATTAATTTGCAGGATTGCGGAACAGATGTCAGCACGGTTGACGTCACCTTTTCAGGAACCCCCGACGGAGTGCAGAGCGAAATGTTGTCCATTGAAAGTGGTACGGATGCAGCCAGCGGGCTGGCAATTGCGATTCTGGATGATGCGAAGATATTGATTCCGCTTAACCAGGCGAGTAAAGACTACAGCCTACATAGCGGTAAGGTGCCATTAACTTTTTATGCGCAATTGCGACCTGTCAATAGCGATGTGCAGTCGGGTAAAGTGAATGCCAGCGCGACATTTGTACTTCATTATGACTAA", - "dna_sequence_length": 516, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_924", - "location": [ - [ - "NC_000913", - 1003439, - "+", - 516 - ] - ], - "md5": "2ecd1a689451dc52fd676bc0552c0a98", - "parent_gene": "", - "protein_md5": "15e74fc5841c10fbae4b43f485281b38", - "protein_translation": "MLKRIIWILFLLGLTWGCELFAHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSHGNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLSIESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD", - "protein_translation_length": 171, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5124" - ], - [ - "gene_synonym", - "NP_415464.4" - ], - [ - "gene_synonym", - "ycbF" - ], - [ - "gene_synonym", - "ASAP:ABE-0003197" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P40876" - ], - [ - "gene_synonym", - "EcoGene:EG12397" - ], - [ - "gene_synonym", - "ECK0935" - ], - [ - "gene_synonym", - "GI:90111192" - ], - [ - "gene_synonym", - "GeneID:945559" - ], - [ - "gene_synonym", - "b0944" - ] - ], - "dna_sequence": "ATGACTAATACGTGGAACAGATTGGCGCTCTTGATTTTCGCCGTTTTATCGCTGCTGGTGGCGGGTGAATTGCAGGCAGGAGTGGTGGTCGGCGGAACGCGATTTATCTTTCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCTTGCCTGTGGATCGCGAAACGCTATTTGAGTTAAGCATTGCCAGCGTGCCATCCGGCAAAGTTGAAAATCAGAGCGTAAAAGTGGCGATGCGCTCGGTATTTAAACTGTTCTGGCGACCCGAAGGTTTGCCGGGCGACCCGCTGGAAGCTTATCAACAATTACGCTGGACACGGAATTCGCAGGGTGTACAACTCACTAACCCAACGCCTTATTACATTAACCTGATTCAGGTGAGTGTAAATGGTAAAGCGTTAAGTAATGTGGGAGTTGTGCCGCCTAAAAGCCAGCGTCAGACAAGCTGGTGTCAGGCAATCGCACCGTGTCATGTCGCCTGGCGGGCGATAAATGATTACGGCGGGTTGAGTGCAAAGAAGGAGCAAAATCTGCCCTGA", - "dna_sequence_length": 711, - "functions": [ - "putative periplasmic pilin chaperone" - ], - "id": "CDS_925", - "location": [ - [ - "NC_000913", - 1003947, - "+", - 711 - ] - ], - "md5": "cd25eb58b4383e4e9ee991f2ac84b87b", - "parent_gene": "", - "protein_md5": "03bbf7ed385172c5b08ce47bd248169b", - "protein_translation": "MTNTWNRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPLLAAPPLILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNVGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGGLSAKKEQNLP", - "protein_translation_length": 236, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10807" - ], - [ - "gene_synonym", - "NP_415465.1" - ], - [ - "gene_synonym", - "JW0928" - ], - [ - "gene_synonym", - "GeneID:945556" - ], - [ - "gene_synonym", - "ASAP:ABE-0003201" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7E1" - ], - [ - "gene_synonym", - "ECK0936" - ], - [ - "gene_synonym", - "pyrD" - ], - [ - "gene_synonym", - "GI:16128912" - ], - [ - "gene_synonym", - "b0945" - ] - ], - "dna_sequence": "ATGTACTACCCCTTCGTTCGTAAAGCCCTTTTCCAGCTCGATCCAGAGCGCGCTCATGAGTTTACTTTTCAGCAATTACGCCGTATTACAGGAACGCCGTTTGAAGCACTGGTGCGGCAGAAAGTGCCTGCGAAACCTGTTAACTGCATGGGCCTGACGTTTAAAAATCCGCTTGGTCTGGCAGCCGGTCTTGATAAAGACGGGGAGTGCATTGACGCGTTAGGCGCGATGGGATTTGGATCGATCGAGATCGGTACCGTCACGCCACGTCCACAGCCAGGTAATGACAAGCCGCGTCTCTTTCGTCTGGTAGATGCCGAAGGTTTGATCAACCGTATGGGCTTTAATAATCTTGGCGTTGATAACCTCGTAGAGAACGTAAAAAAGGCCCATTATGACGGCGTCCTGGGTATTAACATCGGCAAAAATAAAGATACGCCAGTGGAGCAGGGCAAAGATGACTATCTGATTTGTATGGAAAAAATCTATGCCTATGCGGGATATATCGCCATCAATATTTCATCGCCGAATACCCCAGGATTACGCACGCTGCAATATGGTGAAGCGCTGGATGATCTCTTAACCGCGATTAAAAATAAGCAAAATGATTTGCAAGCGATGCACCATAAATATGTGCCGATCGCAGTGAAGATCGCGCCGGATCTTTCTGAAGAAGAATTGATCCAGGTTGCCGATAGTTTAGTTCGCCATAATATTGATGGCGTTATTGCAACCAATACCACACTCGATCGTTCTCTTGTTCAGGGAATGAAAAATTGCGATCAAACCGGTGGCTTAAGTGGTCGTCCGCTTCAGTTAAAAAGCACCGAAATTATTCGCCGCTTGTCACTGGAATTAAACGGTCGCTTACCGATCATCGGTGTTGGCGGCATCGACTCGGTTATCGCTGCGCGTGAAAAGATTGCTGCGGGTGCCTCACTGGTGCAAATTTATTCTGGTTTTATTTTTAAAGGTCCGCCGCTGATTAAAGAAATCGTTACCCATATCTAA", - "dna_sequence_length": 1011, - "functions": [ - "dihydro-orotate oxidase, FMN-linked" - ], - "id": "CDS_926", - "location": [ - [ - "NC_000913", - 1004768, - "+", - 1011 - ] - ], - "md5": "4a16b5142fb0fbc970edf92694c790e4", - "parent_gene": "", - "protein_md5": "b67f2657a8e1d9fbf72ecf5cba7ecdd5", - "protein_translation": "MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPAKPVNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVTHI", - "protein_translation_length": 336, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13715" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75862" - ], - [ - "gene_synonym", - "zapC" - ], - [ - "gene_synonym", - "ASAP:ABE-0003204" - ], - [ - "gene_synonym", - "GI:90111193" - ], - [ - "gene_synonym", - "GeneID:945552" - ], - [ - "gene_synonym", - "JW5125" - ], - [ - "gene_synonym", - "ECK0937" - ], - [ - "gene_synonym", - "b0946" - ], - [ - "gene_synonym", - "ycbW" - ], - [ - "gene_synonym", - "NP_415466.4" - ] - ], - "dna_sequence": "ATGCGAATTAAACCAGACGATAACTGGCGTTGGTATTACGATGAAGAGCACGATCGAATGATGCTCGATTTAGCCAATGGTATGCTATTTCGCTCACGTTTTGCGCGCAAGATGTTGACTCCAGATGCCTTTTCTCCCGCAGGCTTTTGCGTTGACGACGCCGCGCTCTATTTCTCTTTTGAAGAAAAGTGCCGCGATTTTAATTTATCTAAAGAACAAAAAGCCGAACTGGTGCTGAATGCACTGGTAGCAATTCGCTATCTCAAACCGCAAATGCCGAAAAGCTGGCATTTTGTTTCCCATGGTGAAATGTGGGTGCCCATGCCGGGCGATGCGGCCTGCGTTTGGTTGAGCGATACTCACGAGCAGGTCAATTTGCTGGTCGTTGAATCTGGCGAAAATGCCGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAA", - "dna_sequence_length": 543, - "functions": [ - "FtsZ stabilizer" - ], - "id": "CDS_927", - "location": [ - [ - "NC_000913", - 1005952, - "+", - 543 - ] - ], - "md5": "d7a0da7dc052eee3f2e0b4697ea7c319", - "parent_gene": "", - "protein_md5": "46cd86b0ab1a1ff8395460bbf4878e7e", - "protein_translation": "MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV", - "protein_translation_length": 180, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13716" - ], - [ - "gene_synonym", - "GeneID:945563" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75863" - ], - [ - "gene_synonym", - "ASAP:ABE-0003206" - ], - [ - "gene_synonym", - "ycbX" - ], - [ - "gene_synonym", - "ECK0938" - ], - [ - "gene_synonym", - "JW5126" - ], - [ - "gene_synonym", - "GI:16128914" - ], - [ - "gene_synonym", - "b0947" - ], - [ - "gene_synonym", - "NP_415467.1" - ] - ], - "dna_sequence": "GTGGCGACATTAATCCGGCTTTTTATTCATCCTGTTAAATCGATGCGCGGCATTGGTCTTACACATGCTCTGGCAGATGTCAGTGGTCTGGCCTTCGATCGCATCTTTATGATCACGGAACCTGACGGTACGTTTATTACCGCTCGCCAGTTTCCCCAGATGGTACGGTTTACTCCTTCACCTGTGCATGATGGCTTGCATCTCACCGCACCAGATGGCAGTAGCGCATATGTTCGTTTTGCTGATTTCGCCACACAAGACGCACCAACCGAAGTTTGGGGCACACATTTTACCGCGCGAATTGCGCCAGACGCGATCAACAAATGGCTAAGTGGATTTTTCTCCCGCGAAGTGCAATTACGCTGGGTGGGGCCACAAATGACCCGGCGCGTGAAACGCCACAACACTGTACCTCTGTCATTTGCTGATGGCTATCCTTACCTTCTTGCTAACGAAGCCTCGTTACGTGATCTCCAACAACGTTGTCCGGCCAGTGTAAAAATGGAGCAATTCCGCCCCAATCTGGTGGTTTCCGGCGCGTCAGCCTGGGAAGAAGATCGCTGGAAAGTGATTCGCATTGGTGATGTGGTGTTTGATGTGGTTAAACCTTGTAGCCGCTGTATTTTCACCACCGTCAGCCCAGAAAAAGGGCAAAAACATCCGGCAGGCGAACCATTAAAAACATTGCAATCTTTCCGCACTGCCCAGGATAACGGCGATGTCGATTTTGGTCAGAATTTAATTGCCCGTAATAGCGGCGTGATTCGCGTTGGCGATGAGGTGGAAATTCTGGCAACGGCTCCGGCAAAAATTTACGGCGCAGCTGCCGCTGATGATACCGCCAACATCACGCAACAACCGGACGCAAATGTAGATATTGACTGGCAGGGACAGGCATTTCGTGGAAATAACCAACAGGTGTTGCTGGAGCAATTAGAAAATCAGGGAATTCGTATCCCTTATTCTTGCCGCGCGGGCATTTGTGGAAGTTGCCGTGTTCAGCTTTTAGAAGGCGAAGTCACGCCGCTGAAAAAATCAGCAATGGGCGATGATGGCACCATTCTTTGCTGTAGCTGTGTACCGAAGACTGCACTTAAGTTGGCGCGTTAG", - "dna_sequence_length": 1110, - "functions": [ - "6-N-hydroxylaminopurine detoxification oxidoreductase" - ], - "id": "CDS_928", - "location": [ - [ - "NC_000913", - 1007600, - "-", - 1110 - ] - ], - "md5": "5ef20c8fef09880d715fe0d1d0b3388a", - "parent_gene": "", - "protein_md5": "5e795764819894ee45d68d26e4326c15", - "protein_translation": "MATLIRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGTFITARQFPQMVRFTPSPVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIAPDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQRCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGDVDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAAADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQLLEGEVTPLKKSAMGDDGTILCCSCVPKTALKLAR", - "protein_translation_length": 369, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rlmL" - ], - [ - "gene_synonym", - "EcoGene:EG13717" - ], - [ - "gene_synonym", - "JW0931" - ], - [ - "gene_synonym", - "rlmK" - ], - [ - "gene_synonym", - "GeneID:945564" - ], - [ - "gene_synonym", - "rlmKL" - ], - [ - "gene_synonym", - "b0948" - ], - [ - "gene_synonym", - "ycbY" - ], - [ - "gene_synonym", - "ECK0939" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75864" - ], - [ - "gene_synonym", - "GI:16128915" - ], - [ - "gene_synonym", - "ASAP:ABE-0003211" - ], - [ - "gene_synonym", - "NP_415468.1" - ] - ], - "dna_sequence": "ATGAATTCTCTGTTTGCCAGTACGGCCCGTGGGCTGGAAGAGCTGTTAAAAACTGAACTGGAAAACCTGGGGGCCGTTGAATGCCAGGTGGTTCAGGGTGGGGTCCATTTCAAGGGCGACACACGGCTTGTTTACCAGAGCCTGATGTGGAGCCGCCTGGCCTCGCGTATTATGTTGCCGCTGGGCGAGTGTAAGGTTTACAGCGATTTAGACCTCTATCTCGGTGTTCAGGCGATCAACTGGACAGAGATGTTTAATCCTGGCGCGACCTTCGCTGTCCACTTCAGTGGTTTGAATGACACCATCCGCAACAGTCAGTACGGCGCGATGAAAGTGAAAGACGCGATCGTCGATGCTTTCACGCGGAAAAATCTGCCGCGTCCAAATGTTGATCGCGATGCGCCGGATATCCGCGTTAACGTCTGGCTGCATAAAGAAACCGCCAGTATCGCTCTTGATCTGAGTGGTGATGGTTTACATCTGCGTGGCTATCGCGATCGTGCTGGTATTGCGCCGATCAAAGAAACCCTGGCAGCCGCTATTGTGATGCGATCCGGCTGGCAGCCAGGAACACCGCTGCTCGATCCGATGTGTGGTTCCGGTACGTTGCTGATTGAAGCAGCGATGCTGGCGACCGATCGCGCACCAGGCTTGCACCGTGGGCGTTGGGGCTTTAGCGGCTGGGCGCAGCATGATGAAGCTATCTGGCAGGAAGTGAAAGCGGAAGCGCAAACTCGCGCCCGTAAAGGCCTGGCTGAGTATAGCTCTCATTTTTACGGTTCGGACAGCGACGCACGGGTGATTCAACGTGCACGCACTAACGCCCGTCTTGCGGGGATTGGTGAACTGATCACCTTTGAGGTGAAAGATGTCGCGCAACTGACCAATCCGCTGCCGAAAGGGCCGTACGGCACAGTGTTGAGCAACCCGCCATACGGGGAACGTCTGGACAGCGAACCGGCGCTGATTGCGCTGCATAGCCTGCTGGGTCGGATCATGAAAAACCAGTTTGGTGGCTGGAATCTCTCTTTGTTTAGTGCCTCGCCGGATCTGCTAAGCTGCTTGCAGCTGCGTGCAGACAAACAGTACAAGGCGAAAAACGGCCCGCTGGACTGCGTACAGAAAAATTACCACGTTGCCGAAAGCACTCCAGACAGCAAACCGGCGATGGTAGCGGAAGACTACACCAACCGCCTGCGTAAGAACCTCAAAAAATTCGAGAAGTGGGCTCGCCAGGAAGGGATTGAATGTTACCGCCTGTATGACGCCGATCTGCCAGAATATAACGTTGCCGTTGACCGTTATGCCGACTGGGTGGTGGTGCAGGAGTATGCGCCGCCAAAAACTATTGATGCTCACAAAGCGCGTCAGCGTCTGTTCGATATTATCGCTGCAACCATTTCGGTACTGGGGATTGCGCCAAACAAACTGGTGCTGAAAACCCGTGAACGCCAGAAGGGCAAAAACCAATACCAGAAACTGGGCGAGAAGGGCGAGTTTCTTGAAGTTACCGAATATAACGCTCACTTGTGGGTGAACCTGACGGATTATCTCGATACTGGTCTGTTCCTCGATCACCGCATCGCCCGTCGTATGCTCGGTCAGATGAGCAAAGGCAAAGATTTCCTCAACCTGTTCTCTTATACCGGCAGCGCCACCGTGCATGCGGGATTAGGCGGTGCACGCAGCACCACCACCGTGGATATGTCGCGTACTTATCTGGAATGGGCAGAACGCAACCTGCGTCTGAATGGCCTGACCGGGCGTGCGCATCGCCTGATTCAGGCCGATTGCCTGGCGTGGCTGCGTGAGGCAAATGAACAGTTCGATCTGATCTTTATCGATCCGCCAACCTTCTCTAACTCAAAACGAATGGAAGATGCGTTTGATGTTCAGCGCGATCATCTGGCGCTGATGAAAGATTTGAAACGTCTGCTGCGTGCAGGTGGGACGATCATGTTCTCGAACAACAAACGTGGCTTCCGTATGGATCTCGACGGCCTGGCAAAACTGGGACTGAAAGCACAAGAAATTACGCAAAAAACGCTCTCCCAGGATTTCGCCCGTAACCGCCAGATCCACAACTGCTGGCTGATTACCGCAGCCTGA", - "dna_sequence_length": 2109, - "functions": [ - "23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM-dependent" - ], - "id": "CDS_929", - "location": [ - [ - "NC_000913", - 1007844, - "+", - 2109 - ] - ], - "md5": "be046447b886a7098d4c0eb22733c9ba", - "parent_gene": "", - "protein_md5": "7e23c1fcf603a5f63994d59b1ad64ad1", - "protein_translation": "MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKTLSQDFARNRQIHNCWLITAA", - "protein_translation_length": 702, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ycbH" - ], - [ - "gene_synonym", - "ycbI" - ], - [ - "gene_synonym", - "JW0932" - ], - [ - "gene_synonym", - "NP_415469.1" - ], - [ - "gene_synonym", - "GeneID:945566" - ], - [ - "gene_synonym", - "uup" - ], - [ - "gene_synonym", - "ECK0940" - ], - [ - "gene_synonym", - "b0949" - ], - [ - "gene_synonym", - "EcoGene:EG13134" - ], - [ - "gene_synonym", - "ASAP:ABE-0003213" - ], - [ - "gene_synonym", - "GI:16128916" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P43672" - ] - ], - "dna_sequence": "ATGTCATTAATCAGTATGCATGGCGCATGGCTGTCGTTCAGCGACGCGCCGCTTCTCGATAACGCAGAACTGCATATCGAAGATAACGAACGTGTTTGTCTGGTGGGCCGCAACGGCGCAGGCAAATCGACGTTAATGAAAATCCTCAACCGTGAACAAGGGCTGGATGACGGTCGCATTATTTACGAGCAAGATTTGATTGTAGCGCGTCTGCAACAGGATCCGCCGCGTAACGTTGAGGGTAGCGTTTATGATTTCGTTGCCGAAGGCATTGAAGAACAAGCGGAATATCTGAAACGCTATCACGATATTTCGCGCCTGGTGATGAACGACCCGAGCGAGAAAAATCTCAACGAACTGGCGAAGGTTCAGGAACAGCTGGATCACCACAACCTGTGGCAGCTGGAAAACCGCATCAACGAAGTGCTGGCGCAACTGGGGTTAGATCCTAACGTTGCGCTGTCGTCGCTTTCCGGCGGCTGGTTGCGTAAAGCGGCATTAGGACGCGCGCTGGTGAGTAATCCGCGCGTGCTGTTGCTTGATGAACCGACAAACCACCTGGATATTGAAACCATCGACTGGCTGGAAGGGTTTTTGAAAACTTTCAACGGGACGATTATTTTCATCTCCCACGACCGTTCGTTTATCCGCAATATGGCGACGCGCATTGTTGATCTCGATCGCGGCAAGCTGGTGACCTATCCAGGGAATTACGACCAGTACCTGCTGGAAAAAGAAGAAGCCCTGCGCGTGGAAGAATTACAAAATGCCGAGTTCGATCGCAAACTGGCGCAGGAAGAGGTGTGGATCCGCCAGGGGATCAAAGCACGCCGTACCCGTAATGAAGGCCGCGTACGCGCCCTGAAAGCGATGCGTCGCGAACGTGGTGAACGTCGCGAAGTGATGGGTACCGCAAAGATGCAGGTGGAAGAGGCCAGCCGCTCCGGTAAAATCGTTTTCGAAATGGAAGACGTTTGCTACCAGGTTAACGGTAAGCAACTGGTGAAAGATTTTTCTGCCCAGGTTCTACGTGGCGACAAAATTGCCCTGATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCACCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAAGAGGTGATGGTTAACGGCAAGCCACGCCACGTATTGGGCTATTTGCAGGACTTTCTGTTCCATCCGAAACGGGCGATGACGCCGGTACGTGCGCTTTCTGGCGGTGAGCGGAACCGCTTGCTGCTGGCGCGTTTGTTCCTCAAACCAAGCAACTTATTGATTCTTGACGAACCGACCAACGATCTTGATGTCGAAACGCTGGAACTGCTGGAAGAACTGATCGACAGCTATCAGGGCACGGTATTGCTGGTTAGCCACGATCGTCAGTTTGTCGATAACACCGTTACAGAATGTTGGATCTTCGAAGGCGGCGGTAAAATTGGTCGTTATGTCGGCGGTTATCATGATGCCCGTGGTCAGCAAGAGCAGTATGTGGCGCTCAAACAGCCTGCGGTGAAAAAAACCGAAGAAGCCGCCGCGGCAAAAGCAGAAACTGTAAAACGCAGCAGTAGCAAACTAAGCTATAAATTGCAGCGCGAACTGGAGCAGCTACCGCAATTGCTCGAAGATCTGGAGGCGAAGCTGGAAGCCCTACAGACGCAAGTGGCGGATGCTTCCTTCTTCAGTCAGCCGCATGAGCAGACGCAAAAAGTGCTTGCTGATATGGCTGCTGCAGAGCAGGAGCTGGAGCAAGCCTTTGAACGCTGGGAGTATCTTGAAGCGTTAAAAAATGGTGGCTGA", - "dna_sequence_length": 1908, - "functions": [ - "replication regulatory ABC-F family DNA-binding ATPase" - ], - "id": "CDS_930", - "location": [ - [ - "NC_000913", - 1009964, - "+", - 1908 - ] - ], - "md5": "4b9ca3493e271f33e73b845322c8e94f", - "parent_gene": "", - "protein_md5": "742d2f6c2765fa66d4f2849938438877", - "protein_translation": "MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRIIYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYHDISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGGWLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRNMATRIVDLDRGKLVTYPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKARRTRNEGRVRALKAMRRERGERREVMGTAKMQVEEASRSGKIVFEMEDVCYQVNGKQLVKDFSAQVLRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRAELDPDKTVMDNLAEGKQEVMVNGKPRHVLGYLQDFLFHPKRAMTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHDRQFVDNTVTECWIFEGGGKIGRYVGGYHDARGQQEQYVALKQPAVKKTEEAAAAKAETVKRSSSKLSYKLQRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFERWEYLEALKNGG", - "protein_translation_length": 635, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFL9" - ], - [ - "gene_synonym", - "JW0933" - ], - [ - "gene_synonym", - "EcoGene:EG12965" - ], - [ - "gene_synonym", - "GeneID:944999" - ], - [ - "gene_synonym", - "ECK0941" - ], - [ - "gene_synonym", - "pqi5" - ], - [ - "gene_synonym", - "NP_415470.1" - ], - [ - "gene_synonym", - "GI:16128917" - ], - [ - "gene_synonym", - "b0950" - ], - [ - "gene_synonym", - "pqiA" - ], - [ - "gene_synonym", - "ASAP:ABE-0003219" - ] - ], - "dna_sequence": "ATGTGCGAACATCATCATGCCGCGAAGCACATCCTGTGCTCGCAGTGTGACATGCTGGTGGCGTTACCGCGCCTTGAGCATGGTCAGAAAGCGGCATGTCCCCGGTGTGGCACAACGTTAACCGTGGCGTGGGATGCCCCTCGGCAGCGTCCCACCGCCTATGCGTTGGCTGCACTGTTCATGCTGTTGCTGTCCAACTTGTTTCCTTTTGTGAATATGAACGTTGCAGGAGTTACCAGTGAAATTACATTACTGGAAATTCCCGGCGTGCTTTTTTCTGAGGACTACGCCAGCCTCGGCACCTTTTTCCTGTTGTTTGTGCAACTGGTTCCCGCGTTTTGTCTGATAACCATTCTGTTACTGGTGAATCGCGCGGAATTACCGGTCCGTTTAAAAGAGCAACTGGCACGGGTGCTTTTTCAACTCAAAACCTGGGGAATGGCGGAGATTTTCCTCGCGGGTGTGCTGGTCAGTTTCGTTAAACTGATGGCTTACGGCAGCATTGGGGTAGGCAGCAGCTTTCTCCCCTGGTGTTTATTTTGTGTCCTGCAACTGCGCGCTTTTCAGTGCGTTGATCGTCGCTGGTTATGGGACGACATCGCCCCGATGCCAGAACTGCGCCAGCCGCTAAAACCAGGCGTCACGGGGATACGTCAGGGGCTGCGTTCGTGCTCCTGTTGTACGGCAATCCTTCCTGCTGATGAACCCGTGTGCCCGCGTTGTAGTACCAAAGGGTACGTTCGGCGTAGAAACAGCCTGCAGTGGACACTCGCGCTGCTTGTAACGTCCATCATGCTGTATCTTCCGGCTAATATTTTGCCCATCATGGTGACGGATTTATTAGGCTCGAAGATGCCGTCGACGATTCTCGCTGGGGTCATTCTGTTATGGAGCGAAGGCTCTTATCCCGTCGCTGCGGTGATCTTTCTGGCCAGTATTATGGTGCCAACGTTAAAGATGATCGCCATCGCGTGGCTGTGTTGGGATGCCAAAGGGCATGGCAAGCGCGACAGTGAAAGAATGCATTTGATTTATGAAGTTGTTGAGTTTGTAGGCCGCTGGTCGATGATTGACGTTTTCGTTATCGCGGTGCTCTCGGCGCTGGTGCGTATGGGAGGTTTAATGAGTATTTATCCGGCAATGGGTGCATTAATGTTTGCTTTAGTCGTCATAATGACAATGTTTTCTGCTATGACGTTTGACCCGCGTTTGTCGTGGGATCGTCAACCTGAATCAGAGCATGAGGAGTCCTGA", - "dna_sequence_length": 1254, - "functions": [ - "paraquat-inducible, SoxRS-regulated inner membrane protein" - ], - "id": "CDS_931", - "location": [ - [ - "NC_000913", - 1012001, - "+", - 1254 - ] - ], - "md5": "d5716c43cee9a1cfd39b46bbadf1f0bf", - "parent_gene": "", - "protein_md5": "f939cdca0fd1d1ed4d214683c9e9a204", - "protein_translation": "MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAWDAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTFFLLFVQLVPAFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFVKLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIRQGLRSCSCCTAILPADEPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIMVTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHGKRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIMTMFSAMTFDPRLSWDRQPESEHEES", - "protein_translation_length": 417, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0934" - ], - [ - "gene_synonym", - "GeneID:945653" - ], - [ - "gene_synonym", - "pqi5" - ], - [ - "gene_synonym", - "b0951" - ], - [ - "gene_synonym", - "NP_415471.1" - ], - [ - "gene_synonym", - "GI:16128918" - ], - [ - "gene_synonym", - "pqiB" - ], - [ - "gene_synonym", - "ECK0942" - ], - [ - "gene_synonym", - "ASAP:ABE-0003221" - ], - [ - "gene_synonym", - "EcoGene:EG12966" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P43671" - ] - ], - "dna_sequence": "ATGGAATCTAATAATGGGGAAGCCAAAATCCAGAAAGTGAAGAACTGGTCTCCCGTGTGGATATTTCCTATCGTCACGGCGCTCATTGGGGCCTGGGTTCTTTTTTATCATTACAGCCATCAGGGACCGGAAGTGACCCTGATCACCGCGAATGCGGAAGGAATTGAAGGTGGCAAAACCACCATTAAAAGCCGTAGCGTTGACGTCGGCGTGGTTGAAAGCGCCACACTGGCTGATGATTTGACGCACGTTGAAATCAAAGCGCGGCTGAATTCCGGTATGGAAAAATTGCTGCATAAAGACACCGTCTTTTGGGTGGTGAAACCGCAGATTGGTCGCGAAGGGATTAGCGGCCTGGGAACGCTGCTGTCTGGAGTTTATATCGAACTGCAGCCAGGCGCGAAAGGCAGCAAAATGGATAAATACGATTTGCTGGACTCGCCACCGTTGGCCCCGCCTGATGCGAAAGGTATCCGTGTGATTCTCGATAGCAAAAAAGCCGGGCAGCTCTCGCCAGGAGATCCGGTGCTGTTCCGTGGCTATCGGGTAGGTTCGGTTGAAACCAGCACCTTCGATACACAAAAACGCAATATCAGCTATCAACTGTTCATCAATGCACCTTATGACCGACTGGTGACCAACAATGTTCGCTTCTGGAAAGATAGTGGCATTGCGGTTGATCTGACGTCAGCAGGGATGCGTGTGGAGATGGGCTCATTGACAACGCTGCTGAGTGGCGGTGTCAGCTTTGATGTGCCGGAAGGTCTGGATTTAGGGCAGCCAGTGGCACCGAAAACAGCTTTCGTTTTGTATGATGATCAGAAGAGCATTCAGGATTCGTTGTACACCGATCACATTGATTATCTGATGTTCTTTAAAGATTCGGTACGCGGTCTGCAACCGGGAGCTCCGGTAGAGTTCCGGGGTATTCGCCTGGGTACCGTAAGCAAAGTGCCATTCTTTGCGCCGAATATGCGTCAGACATTTAACGATGATTACCGTATTCCGGTACTGATTCGTATCGAGCCAGAGCGGCTGAAAATGCAGCTTGGCGAAAATGCGGATGTTGTTGAGCACCTTGGCGAATTGTTGAAACGTGGTTTACGCGGATCGCTGAAAACCGGAAACCTGGTCACTGGTGCACTGTATGTTGATCTCGATTTCTATCCAAATACGCCTGCAATAACCGGTATTCGTGAATTTAATGGTTATCAGATTATCCCGACCGTTAGCGGCGGCCTGGCGCAAATCCAGCAACGACTGATGGAAGCGTTGGATAAGATCAACAAACTGCCATTGAATCCGATGATTGAACAGGCAACCAGTACGCTTTCTGAAAGTCAGCGCACAATGAAAAACCTGCAAACGACGCTGGATAGCATGAACAAGATCCTCGCTAGCCAGTCGATGCAGCAGTTGCCGACGGATATGCAGTCAACGTTGCGTGAATTGAATCGCAGCATGCAGGGCTTCCAGCCTGGCTCCGCAGCCTACAACAAGATGGTGGCGGATATGCAGCGCCTTGATCAGGTGTTGCGAGAACTGCAACCGGTGCTGAAAACGCTCAATGAGAAGAGTAACGCGCTGGTATTTGAAGCGAAGGACAAAAAAGATCCAGAGCCGAAGAGGGCGAAACAATGA", - "dna_sequence_length": 1641, - "functions": [ - "paraquat-inducible, SoxRS-regulated MCE domain protein" - ], - "id": "CDS_932", - "location": [ - [ - "NC_000913", - 1013259, - "+", - 1641 - ] - ], - "md5": "a7ed64f957c1a82b60ef49fdf6a9c118", - "parent_gene": "", - "protein_md5": "61acd3582d9c4b965d1feae2c5e4a5ff", - "protein_translation": "MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPEVTLITANAEGIEGGKTTIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDTVFWVVKPQIGREGISGLGTLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRVILDSKKAGQLSPGDPVLFRGYRVGSVETSTFDTQKRNISYQLFINAPYDRLVTNNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVDLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLSESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ", - "protein_translation_length": 546, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB10" - ], - [ - "gene_synonym", - "GI:145698237" - ], - [ - "gene_synonym", - "NP_415472.2" - ], - [ - "gene_synonym", - "GeneID:946972" - ], - [ - "gene_synonym", - "EcoGene:EG13719" - ], - [ - "gene_synonym", - "ECK0943" - ], - [ - "gene_synonym", - "ymbA" - ], - [ - "gene_synonym", - "JW5127" - ], - [ - "gene_synonym", - "pqiC" - ], - [ - "gene_synonym", - "b0952" - ], - [ - "gene_synonym", - "ASAP:ABE-0003223" - ] - ], - "dna_sequence": "ATGAAAAAGTGGCTAGTGACGATTGCAGCACTGTGGCTGGCCGGATGCAGCTCCGGCGAAATTAATAAAAACTATTACCAGTTACCTGTGGTGCAGAGCGGTACACAAAGTACCGCCAGCCAGGGCAATCGTCTGTTATGGGTAGAGCAGGTCACTGTTCCTGACTATCTGGCGGGGAATGGTGTGGTTTATCAAACCAGTGATGTGAAGTATGTGATTGCCAACAACAACTTGTGGGCCAGCCCGTTGGATCAACAGTTGCGCAACACCCTGGTTGCCAACCTGAGTACGCAACTGCCCGGCTGGGTGGTTGCCTCCCAGCCTCTGGGAAGCGCCCAGGACACGCTCAATGTTACCGTAACGGAGTTTAACGGTCGCTATGATGGCAAGGTCATTGTCAGTGGTGAGTGGCTGTTGAACCACCAGGGACAACTGATCAAACGTCCGTTCCGTCTGGAAGGAGTGCAAACTCAGGATGGTTACGATGAGATGGTTAAAGTGCTGGCCGGTGTCTGGAGTCAGGAAGCCGCTTCTATTGCACAAGAGATAAAGCGTCTACCTTAA", - "dna_sequence_length": 564, - "functions": [ - "DUF330 family putative lipoprotein" - ], - "id": "CDS_933", - "location": [ - [ - "NC_000913", - 1014896, - "+", - 564 - ] - ], - "md5": "a601a9475bc52a21a0b53292761452c1", - "parent_gene": "", - "protein_md5": "bd691998ea3f9cfa35179f4cc74664a0", - "protein_translation": "MKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQDTLNVTVTEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDGYDEMVKVLAGVWSQEAASIAQEIKRLP", - "protein_translation_length": 187, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415473.1" - ], - [ - "gene_synonym", - "GeneID:945567" - ], - [ - "gene_synonym", - "JW0936" - ], - [ - "gene_synonym", - "ECK0944" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFW2" - ], - [ - "gene_synonym", - "rmf" - ], - [ - "gene_synonym", - "GI:16128920" - ], - [ - "gene_synonym", - "EcoGene:EG50004" - ], - [ - "gene_synonym", - "b0953" - ], - [ - "gene_synonym", - "ASAP:ABE-0003227" - ] - ], - "dna_sequence": "ATGAAGAGACAAAAACGAGATCGCCTGGAACGGGCACATCAACGTGGTTATCAGGCCGGCATCGCCGGACGCTCAAAAGAAATGTGTCCCTATCAGACGCTGAATCAAAGGTCACAATGGCTGGGAGGCTGGCGAGAAGCCATGGCGGACAGGGTAGTAATGGCCTGA", - "dna_sequence_length": 168, - "functions": [ - "ribosome modulation factor" - ], - "id": "CDS_934", - "location": [ - [ - "NC_000913", - 1015715, - "+", - 168 - ] - ], - "md5": "3f27c26a89f395d18db2854cf89589f5", - "parent_gene": "", - "protein_md5": "d4cde8ccefd4aac4b796529242bb3092", - "protein_translation": "MKRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSQWLGGWREAMADRVVMA", - "protein_translation_length": 55, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0937" - ], - [ - "gene_synonym", - "GeneID:945568" - ], - [ - "gene_synonym", - "ECK0945" - ], - [ - "gene_synonym", - "NP_415474.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6Q3" - ], - [ - "gene_synonym", - "fabA" - ], - [ - "gene_synonym", - "GI:16128921" - ], - [ - "gene_synonym", - "ASAP:ABE-0003229" - ], - [ - "gene_synonym", - "EcoGene:EG10273" - ], - [ - "gene_synonym", - "b0954" - ] - ], - "dna_sequence": "ATGGTAGATAAACGCGAATCCTATACAAAAGAAGACCTTCTTGCCTCTGGTCGCGGTGAACTGTTTGGCGCTAAAGGCCCGCAATTGCCAGCACCGAACATGCTGATGATGGACCGTGTGGTCAAAATGACCGAAACGGGTGGTAACTTCGACAAAGGGTATGTTGAAGCAGAACTGGATATCAATCCGGATCTGTGGTTCTTCGGATGCCACTTTATTGGCGATCCGGTTATGCCGGGATGCCTGGGCCTGGACGCAATGTGGCAGCTGGTAGGGTTCTACCTCGGCTGGCTGGGCGGCGAAGGTAAAGGCCGCGCGCTGGGCGTTGGCGAAGTGAAATTCACTGGTCAGGTACTGCCGACAGCGAAAAAAGTGACCTACCGTATTCACTTTAAACGCATTGTTAACCGTCGTCTGATTATGGGCCTGGCGGATGGCGAAGTGCTGGTTGATGGTCGTCTGATCTATACCGCCAGCGACCTGAAAGTCGGTCTGTTCCAGGATACGTCTGCCTTCTGA", - "dna_sequence_length": 519, - "functions": [ - "beta-hydroxydecanoyl thioester dehydrase" - ], - "id": "CDS_935", - "location": [ - [ - "NC_000913", - 1016470, - "-", - 519 - ] - ], - "md5": "6f94f974ef0e6d50216e03c334812a56", - "parent_gene": "", - "protein_md5": "f02c85ffe7784203e2291bb5cd740ffe", - "protein_translation": "MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMTETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASDLKVGLFQDTSAF", - "protein_translation_length": 172, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75867" - ], - [ - "gene_synonym", - "GeneID:945569" - ], - [ - "gene_synonym", - "ECK0946" - ], - [ - "gene_synonym", - "EcoGene:EG13718" - ], - [ - "gene_synonym", - "JW0938" - ], - [ - "gene_synonym", - "ycbZ" - ], - [ - "gene_synonym", - "GI:16128922" - ], - [ - "gene_synonym", - "NP_415475.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003233" - ], - [ - "gene_synonym", - "b0955" - ] - ], - "dna_sequence": "TTGACCATTACGAAACTTGCATGGCGTGACCTGGTTCCTGATACCGATAGCTATCAGGAAATATTTGCTCAGCCACATTTGATTGACGAAAACGATCCTTTATTCAGTGATACTCAACCGCGGCTGCAATTTGCGCTGGAGCAGTTGCTGCATACGCGAGCATCCTCCTCTTTTATGCTGGCGAAGGCCCCGGAAGAGTCTGAGTATCTGAATCTTATTGCCAATGCCGCGCGTACGCTACAAAGCGATGCAGGCCAACTGGTGGGCGGTCACTATGAGGTTTCCGGCCACTCCATCCGCTTACGTCACGCAGTGAGTGCAGATGATAATTTTGCGACTTTAACGCAAGTTGTCGCTGCCGACTGGGTAGAAGCGGAGCAACTCTTTGGCTGCCTGCGCCAGTTTAATGGCGACATTACCCTGCAGCCTGGTCTGGTGCATCAGGCAAATGGCGGTATTCTCATTATCTCTTTGCGTACACTGCTGGCGCAACCTCTGCTGTGGATGCGGCTGAAAAATATCGTTAACCGCGAGCGTTTTGACTGGGTTGCGTTTGATGAGTCGCGCCCTCTCCCCGTCTCTGTGCCTTCGATGCCATTGAAGCTGAAAGTCATTCTGGTAGGCGAACGCGAATCATTGGCTGATTTCCAGGAGATGGAGCCAGAGCTTTCAGAGCAGGCTATTTATAGCGAATTTGAAGATACTCTGCAGATTGTCGATGCGGAGTCAGTAACCCAGTGGTGTCGCTGGGTGACATTTACCGCCAGACATAATCACTTACCTGCACCGGGAGCGGATGCCTGGCCGATACTTATCCGCGAAGCAGCACGCTACACCGGTGAACAAGAAACACTTCCGCTTAGCCCGCAGTGGATCCTCCGCCAGTGTAAAGAGGTCGCCTCCCTGTGTGATGGCGACACCTTCTCCGGCGAGCAGCTAAACTTAATGCTGCAGCAGCGTGAATGGCGCGAAGGTTTCCTCGCTGAACGTATGCAGGATGAGATCCTTCAGGAGCAAATCCTGATTGAAACCGAAGGCGAACGCATCGGGCAAATTAACGCCCTTTCGGTCATTGAATTTCCGGGTCATCCACGCGCTTTTGGCGAACCTTCTCGCATTAGCTGCGTTGTGCATATTGGCGATGGTGAATTCACCGACATCGAACGCAAAGCGGAGCTTGGCGGCAATATCCATGCGAAAGGGATGATGATCATGCAAGCGTTCCTGATGTCGGAACTACAGCTTGAGCAACAGATCCCCTTCTCAGCATCGCTGACATTTGAGCAGTCATACAGTGAAGTTGATGGAGATAGTGCCTCGATGGCTGAACTCTGCGCCCTGATAAGCGCCCTCGCCGATGTGCCGGTGAATCAGAGTATCGCTATCACAGGTTCAGTCGATCAGTTCGGTCGCGCCCAGCCGGTCGGTGGTTTAAATGAGAAAATCGAAGGCTTCTTTGCTATTTGCCAGCAACGTGAGTTAACCGGGAAACAAGGTGTCATTATCCCCACAGCTAACGTTCGCCATTTAAGTCTTCACAGTGAACTGGTGAAAGCGGTAGAAGAAGGCAAATTCACCATCTGGGCAGTAGACGATGTGACTGACGCACTGCCGTTATTATTAAATCTGGTGTGGGATGGCGAAGGCCAAACGACGCTGATGCAAACCATCCAGGAACGTATCGCGCAAGCATCGCAACAGGAAGGACGTCACCGTTTTCCATGGCCATTACGTTGGCTGAACTGGTTTATTCCGAACTGA", 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"matP" - ], - [ - "gene_synonym", - "ECK0947" - ], - [ - "gene_synonym", - "EcoGene:EG12855" - ], - [ - "gene_synonym", - "ycbG" - ], - [ - "gene_synonym", - "JW0939" - ], - [ - "gene_synonym", - "ASAP:ABE-0003238" - ], - [ - "gene_synonym", - "GeneID:945570" - ], - [ - "gene_synonym", - "GI:16128923" - ], - [ - "gene_synonym", - "NP_415476.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8N0" - ], - [ - "gene_synonym", - "b0956" - ] - ], - "dna_sequence": "ATGAAATATCAACAACTTGAAAATCTTGAAAGCGGTTGGAAATGGAAGTATCTGGTTAAGAAGCATCGCGAAGGGGAGTTAATCACCCGTTACATAGAAGCCAGTGCCGCCCAGGAAGCCGTCGATGTGTTGCTCTCGCTGGAAAATGAACCCGTGCTGGTAAATGGCTGGATTGACAAGCATATGAATCCGGAACTGGTCAATCGCATGAAGCAAACCATTCGGGCAAGACGAAAGCGCCATTTTAATGCGGAACACCAGCATACGCGCAAAAAATCGATCGATCTGGAATTTATTGTCTGGCAACGTCTGGCTGGTCTTGCGCAGCGTCGCGGTAAAACGCTTTCTGAAACGATTGTTCAGCTGATTGAAGATGCGGAAAACAAAGAGAAATACGCGAATAAAATGTCTTCTCTGAAGCAGGATCTGCAGGCATTGCTGGGTAAGGAATAA", - "dna_sequence_length": 453, - "functions": [ - "Ter macrodomain organizer matS-binding protein" - ], - "id": "CDS_937", - "location": [ - [ - "NC_000913", - 1018485, - "+", - 453 - ] - ], - "md5": "d82b912a202dc8146609ed475a7b5fa8", - "parent_gene": "", - "protein_md5": "5e6a0c788d0c833da07e1ed249e16d3e", - "protein_translation": "MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVLLSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQRLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKQDLQALLGKE", - "protein_translation_length": 150, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10669" - ], - [ - "gene_synonym", - "JW0940" - ], - [ - "gene_synonym", - "ECK0948" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A910" - ], - [ - "gene_synonym", - "NP_415477.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003240" - ], - [ - "gene_synonym", - "tut" - ], - [ - "gene_synonym", - "GeneID:945571" - ], - [ - "gene_synonym", - "GI:16128924" - ], - [ - "gene_synonym", - "ompA" - ], - [ - "gene_synonym", - "tolG" - ], - [ - "gene_synonym", - "b0957" - ], - [ - "gene_synonym", - "con" - ] - ], - "dna_sequence": "ATGAAAAAGACAGCTATCGCGATTGCAGTGGCACTGGCTGGTTTCGCTACCGTAGCGCAGGCCGCTCCGAAAGATAACACCTGGTACACTGGTGCTAAACTGGGCTGGTCCCAGTACCATGACACTGGTTTCATCAACAACAATGGCCCGACCCATGAAAACCAACTGGGCGCTGGTGCTTTTGGTGGTTACCAGGTTAACCCGTATGTTGGCTTTGAAATGGGTTACGACTGGTTAGGTCGTATGCCGTACAAAGGCAGCGTTGAAAACGGTGCATACAAAGCTCAGGGCGTTCAACTGACCGCTAAACTGGGTTACCCAATCACTGACGACCTGGACATCTACACTCGTCTGGGTGGCATGGTATGGCGTGCAGACACTAAATCCAACGTTTATGGTAAAAACCACGACACCGGCGTTTCTCCGGTCTTCGCTGGCGGTGTTGAGTACGCGATCACTCCTGAAATCGCTACCCGTCTGGAATACCAGTGGACCAACAACATCGGTGACGCACACACCATCGGCACTCGTCCGGACAACGGCATGCTGAGCCTGGGTGTTTCCTACCGTTTCGGTCAGGGCGAAGCAGCTCCAGTAGTTGCTCCGGCTCCAGCTCCGGCACCGGAAGTACAGACCAAGCACTTCACTCTGAAGTCTGACGTTCTGTTCAACTTCAACAAAGCAACCCTGAAACCGGAAGGTCAGGCTGCTCTGGATCAGCTGTACAGCCAGCTGAGCAACCTGGATCCGAAAGACGGTTCCGTAGTTGTTCTGGGTTACACCGACCGCATCGGTTCTGACGCTTACAACCAGGGTCTGTCCGAGCGCCGTGCTCAGTCTGTTGTTGATTACCTGATCTCCAAAGGTATCCCGGCAGACAAGATCTCCGCACGTGGTATGGGCGAATCCAACCCGGTTACTGGCAACACCTGTGACAACGTGAAACAGCGTGCTGCACTGATCGACTGCCTGGCTCCGGATCGTCGCGTAGAGATCGAAGTTAAAGGTATCAAAGACGTTGTAACTCAGCCGCAGGCTTAA", 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"protein_md5": "66e7df825c29df2dd996d2dd7ae4d09a", - "protein_translation": "MYTSGYAHRSSSFSSAASKIARVSTENTTAGLISEVVYREDQPMMTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWVQASGLPLTKVMQISQLSPCHTVESMVRALRTGNYSVVIGWLADDLTEEEHAELVDAANEGNAMGFIMRPVSASSHATRQLSGLKIHSNLYH", - "protein_translation_length": 169, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0942" - ], - [ - "gene_synonym", - "GI:16128926" - ], - [ - "gene_synonym", - "ASAP:ABE-0003249" - ], - [ - "gene_synonym", - "yccR" - ], - [ - "gene_synonym", - "EcoGene:EG13720" - ], - [ - "gene_synonym", - "ECK0950" - ], - [ - "gene_synonym", - "NP_415479.1" - ], - [ - "gene_synonym", - "b0959" - ], - [ - "gene_synonym", - "sxy" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75869" - ], - [ - "gene_synonym", - "GeneID:946504" - ], - [ - "gene_synonym", - "tfoX" - ] - ], - "dna_sequence": "ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATTGTTTGGCAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTGAGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAATTACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCTGAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCGGGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAACAGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACGCCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA", - "dna_sequence_length": 630, - "functions": [ - "CRP-S-dependent promoter expression factor" - ], - "id": "CDS_940", - "location": [ - [ - "NC_000913", - 1021138, - "+", - 630 - ] - ], - "md5": "3f060c27f40408af896459d30379831c", - "parent_gene": "", - "protein_md5": "6361f275c91f2feefb9053d6ca87cca6", - "protein_translation": "MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE", - "protein_translation_length": 209, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0960" - ], - [ - "gene_synonym", - "NP_415480.2" - ], - [ - "gene_synonym", - "yccS" - ], - [ - "gene_synonym", - "GeneID:947001" - ], - [ - "gene_synonym", - "ASAP:ABE-0003251" - ], - [ - "gene_synonym", - "ECK0951" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75870" - ], - [ - "gene_synonym", - "JW5128" - ], - [ - "gene_synonym", - "EcoGene:EG13721" - ], - [ - "gene_synonym", - "GI:90111194" - ] - ], - "dna_sequence": "ATGCTAAGTCCTTTGCTCAAACGCTATACCTGGAACAGCGCCTGGCTGTATTACGCGCGTATTTTTATTGCGCTTTGTGGAACCACAGCGTTTCCGTGGTGGCTGGGTGATGTAAAACTGACGATTCCGCTAACGCTGGGGATGGTGGCAGCGGCGCTGACCGATCTCGATGACCGACTGGCGGGACGTTTGCGTAACCTCATCATTACGCTGTTCTGCTTTTTTATCGCCTCGGCCTCAGTAGAATTGCTGTTTCCCTGGCCCTGGCTATTTGCGATTGGCTTAACGCTCTCTACCAGCGGCTTCATTTTGCTCGGCGGTCTGGGTCAACGCTATGCAACAATTGCCTTCGGTGCATTGCTGATCGCCATTTACACTATGTTGGGAACATCACTGTATGAGCACTGGTATCAGCAGCCGATGTATCTGCTGGCCGGTGCCGTCTGGTACAACGTCCTGACACTTATTGGTCATCTGCTGTTCCCGGTCCGCCCGCTGCAGGACAACCTGGCGCGTTGCTATGAACAACTGGCGCGTTATCTTGAGCTCAAGTCGCGCATGTTTGATCCTGATATTGAAGATCAAAGCCAGGCACCGCTGTACGATTTGGCTCTCGCCAACGGTCTGCTGATGGCGACATTGAATCAGACGAAACTCTCGCTGCTGACCCGCTTACGTGGCGATCGTGGTCAACGGGGAACGCGTCGCACGCTGCATTATTACTTTGTCGCACAGGATATTCACGAGCGTGCCAGCTCTTCTCATATTCAGTATCAAACATTGCGTGAACATTTTCGCCACAGCGACGTGCTGTTCCGTTTTCAGCGGCTGATGTCGATGCAGGGCCAGGCGTGCCAGCAACTGTCACGCTGTATTTTGTTGCGTCAGCCTTATCAACATGATCCGCATTTTGAGCGCGCTTTTACGCATATTGATGCTGCGCTGGAGCGGATGCGCGATAACGGCGCACCCGCCGATTTACTCAAAACACTGGGATTTTTGCTGAACAATTTACGCGCCATTGATGCCCAACTGGCAACAATTGAATCAGAACAGGCCCAGGCACTACCCCATAATAATGACGAAAATGAGCTCGCTGATGACAGCCCGCACGGGTTGAGTGATATCTGGCTGCGTCTTAGCCGTCACTTCACGCCGGAATCCGCCCTCTTCCGTCATGCGGTAAGAATGTCGCTGGTGTTGTGCTTCGGCTACGCCATCATTCAGATAACCGGAATGCATCACGGGTATTGGATCTTGCTGACAAGTTTGTTTGTCTGCCAGCCAAACTATAACGCCACGCGCCACCGCCTGAAGTTAAGGATTATTGGTACGCTGGTAGGTATCGCCATTGGCATTCCTGTGCTGTGGTTTGTGCCATCACTGGAAGGGCAGCTGGTGCTGCTGGTTATTACCGGCGTGCTCTTTTTTGCCTTCCGTAACGTGCAATACGCTCATGCAACGATGTTCATCACACTTTTGGTGCTACTGTGTTTTAACTTACTGGGTGAAGGTTTTGAAGTAGCGTTACCTCGCGTAATCGATACGCTGATTGGTTGTGCCATTGCGTGGGCGGCAGTGAGCTACATCTGGCCTGACTGGCAGTTTCGCAATCTGCCGCGCATGCTCGAACGCGCCACAGAGGCCAACTGTCGGTATCTCGATGCCATACTGGAGCAATACCATCAGGGGCGTGATAACCGTCTGGCGTATCGTATTGCCCGCCGCGATGCACACAACCGTGATGCTGAGCTGGCGTCGGTGGTATCAAATATGTCCAGCGAGCCGAACGTTACCCCGCAAATTCGCGAAGCCGCGTTTCGGTTGCTGTGCCTTAACCATACGTTTACCAGCTATATCTCAGCCCTCGGTGCTCACCGGGAGCAGTTAACTAATCCTGAAATTCTGGCGTTTCTTGATGACGCAGTTTGCTATGTTGATGACGCGTTACATCATCAACCTGCTGATGAAGAACGCGTCAATGAGGCATTAGCTAGCCTGAAACAGCGGATGCAGCAACTTGAACCACGGGCAGACAGCAAAGAACCTCTGGTCGTACAACAAGTTGGATTATTGATTGCATTACTGCCTGAGATTGGTCGTCTGCAACGCCAGATTACTCAAGTTCCGCAGGAAACTCCTGTTTCGGCGTAA", 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"MLSPLLKRYTWNSAWLYYARIFIALCGTTAFPWWLGDVKLTIPLTLGMVAAALTDLDDRLAGRLRNLIITLFCFFIASASVELLFPWPWLFAIGLTLSTSGFILLGGLGQRYATIAFGALLIAIYTMLGTSLYEHWYQQPMYLLAGAVWYNVLTLIGHLLFPVRPLQDNLARCYEQLARYLELKSRMFDPDIEDQSQAPLYDLALANGLLMATLNQTKLSLLTRLRGDRGQRGTRRTLHYYFVAQDIHERASSSHIQYQTLREHFRHSDVLFRFQRLMSMQGQACQQLSRCILLRQPYQHDPHFERAFTHIDAALERMRDNGAPADLLKTLGFLLNNLRAIDAQLATIESEQAQALPHNNDENELADDSPHGLSDIWLRLSRHFTPESALFRHAVRMSLVLCFGYAIIQITGMHHGYWILLTSLFVCQPNYNATRHRLKLRIIGTLVGIAIGIPVLWFVPSLEGQLVLLVITGVLFFAFRNVQYAHATMFITLLVLLCFNLLGEGFEVALPRVIDTLIGCAIAWAAVSYIWPDWQFRNLPRMLERATEANCRYLDAILEQYHQGRDNRLAYRIARRDAHNRDAELASVVSNMSSEPNVTPQIREAAFRLLCLNHTFTSYISALGAHREQLTNPEILAFLDDAVCYVDDALHHQPADEERVNEALASLKQRMQQLEPRADSKEPLVVQQVGLLIALLPEIGRLQRQITQVPQETPVSA", - "protein_translation_length": 717, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0961" - ], - [ - "gene_synonym", - "JW0944" - ], - [ - "gene_synonym", - "NP_415481.1" - ], - [ - "gene_synonym", - "ECK0952" - ], - [ - "gene_synonym", - "ASAP:ABE-0003253" - ], - [ - "gene_synonym", - "GeneID:945594" - ], - [ - "gene_synonym", - "yccF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB12" - ], - [ - "gene_synonym", - "GI:16128928" - ], - [ - "gene_synonym", - "EcoGene:EG12306" - ] - ], - "dna_sequence": "ATGCGTACCGTTTTGAACATTCTGAACTTTGTGCTTGGCGGATTTGCCACCACTCTGGGCTGGCTGTTGGCGACTCTGGTCAGTATTGTGCTGATTTTTACCTTACCGCTGACACGATCCTGCTGGGAGATCACTAAACTGTCTCTGGTGCCTTATGGCAATGAAGCTATTCATGTCGATGAACTGAACCCGGCTGGCAAAAATGTGCTGCTGAATACTGGCGGTACGGTATTGAATATTTTCTGGCTGATTTTCTTTGGCTGGTGGTTATGCCTGATGCACATTGCAACGGGCATCGCACAATGTATTTCAATCATTGGCATTCCTGTCGGCATTGCGAACTTTAAAATTGCCGCTATTGCACTATGGCCGGTTGGTCGTCGCGTGGTATCGGTAGAAACAGCGCAAGCTGCGCGTGAAGCCAATGCACGTCGTCGTTTTGAATAA", - "dna_sequence_length": 447, - "functions": [ - "DUF307 family inner membrane protein" - ], - "id": "CDS_942", - "location": [ - [ - "NC_000913", - 1024348, - "-", - 447 - ] - ], - "md5": "d19725d7881ccc94129e66d6b2836712", - "parent_gene": "", - "protein_md5": "c72ccfd5cce3382ae775701ab1be4741", - "protein_translation": "MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEITKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQCISIIGIPVGIANFKIAAIALWPVGRRVVSVETAQAAREANARRRFE", - "protein_translation_length": 148, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0962" - ], - [ - "gene_synonym", - "JW0945" - ], - [ - "gene_synonym", - "ECK0953" - ], - [ - "gene_synonym", - "srjB" - ], - [ - "gene_synonym", - "NP_415482.1" - ], - [ - "gene_synonym", - "GeneID:946227" - ], - [ - "gene_synonym", - "ASAP:ABE-0003257" - ], - [ - "gene_synonym", - "EcoGene:EG10426" - ], - [ - "gene_synonym", - "helD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15038" - ], - [ - "gene_synonym", - "GI:16128929" - ] - ], - "dna_sequence": "ATGGAACTGAAAGCGACAACGCTTGGAAAACGTCTGGCACAGCACCCTTACGATCGGGCGGTGATCCTCAATGCCGGGATTAAAGTCTCCGGCGATCGCCACGAATACCTTATTCCTTTCAATCAATTACTGGCGATTCACTGTAAGCGCGGTCTGGTATGGGGCGAGCTGGAATTTGTACTGCCGGACGAAAAAGTGGTGCGTCTGCACGGCACCGAATGGGGCGAGACGCAGCGTTTTTACCATCATCTTGATGCTCACTGGCGGCGGTGGAGTGGCGAGATGAGCGAAATTGCGTCTGGTGTTTTACGCCAGCAACTGGATTTGATTGCCACGCGCACTGGGGAAAATAAATGGCTGACGCGTGAGCAAACCTCTGGCGTGCAGCAACAAATCCGCCAGGCTTTGTCGGCGTTGCCGTTGCCGGTTAACCGACTGGAAGAATTCGATAACTGCCGTGAGGCGTGGCGTAAATGTCAGGCCTGGTTGAAAGATATTGAAAGCGCTCGGTTGCAGCATAACCAGGCGTATACCGAAGCCATGCTTACCGAGTATGCGGATTTTTTCCGCCAGGTCGAGTCTTCACCGCTGAATCCGGCGCAGGCCCGGGCAGTCGTTAATGGCGAGCATTCTCTGTTAGTGCTGGCAGGTGCAGGAAGCGGAAAAACGTCGGTGCTGGTGGCCCGTGCAGGCTGGTTGCTGGCGCGTGGTGAAGCGTCCCCTGAGCAAATTTTATTGCTGGCGTTTGGTCGCAAAGCCGCTGAAGAGATGGACGAGCGGATTCGCGAACGGCTACATACCGAAGACATTACCGCACGCACGTTTCATGCGCTGGCGCTGCATATTATTCAGCAGGGCAGCAAAAAAGTTCCGATAGTCAGCAAACTGGAAAATGATACCGCTGCCCGTCATGAACTCTTTATTGCTGAGTGGCGCAAGCAATGCAGCGAAAAGAAAGCGCAGGCGAAGGGCTGGCGGCAATGGCTGACGGAAGAAATGCAGTGGTCAGTGCCAGAAGGTAACTTCTGGGATGATGAAAAATTACAGCGTCGCCTTGCCTCTCGCCTCGATCGCTGGGTAAGTCTGATGCGGATGCACGGTGGTGCACAGGCAGAAATGATTGCCAGTGCACCCGAAGAGATTCGCGATCTGTTCAGTAAACGTATCAAGTTGATGGCCCCGTTATTAAAAGCCTGGAAAGGTGCGCTGAAGGCAGAAAACGCTGTCGATTTTTCGGGCCTTATTCATCAGGCGATTGTGATTCTGGAGAAAGGTCGCTTTATCAGCCCGTGGAAGCATATTCTGGTTGATGAATTTCAGGATATCTCGCCGCAGCGGGCAGCGTTGTTAGCGGCATTACGCAAGCAAAACAGTCAGACGACGTTGTTCGCTGTTGGTGATGACTGGCAGGCGATTTACCGATTCAGCGGTGCGCAAATGTCGCTCACCACCGCTTTCCATGAAAACTTTGGTGAAGGCGAACGCTGTGATTTAGACACGACTTACCGTTTTAACAGTCGTATCGGTGAGGTGGCAAACCGGTTTATTCAGCAGAACCCAGGCCAGCTGAAAAAGCCGCTAAACAGCTTAACCAATGGAGACAAAAAAGCCGTCACGTTATTGGATGAGAGTCAACTTGACGCTTTGCTGGATAAGCTCTCTGGTTATGCCAAACCGGAAGAGCGCATTCTGATCCTGGCGCGTTACCATCACATGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAATCGACTTTATGACCATTCATGCCAGCAAAGGGCAACAGGCGGATTACGTCATCATCGTTGGCTTGCAGGAGGGAAGTGATGGTTTTCCGGCTGCGGCGCGGGAGTCGATTATGGAAGAGGCGCTACTGCCACCGGTTGAGGATTTCCCGGACGCTGAAGAACGGCGGTTAATGTACGTGGCGCTGACCCGGGCACGCCATCGGGTATGGGCACTGTTTAACAAAGAGAATCCCTCTCCCTTTGTGGAAATACTGAAAAATCTGGATGTGCCGGTGGCGAGAAAACCGTAA", 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"protein_translation_length": 684, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003259" - ], - [ - "gene_synonym", - "b0963" - ], - [ - "gene_synonym", - "GI:90111195" - ], - [ - "gene_synonym", - "GeneID:945574" - ], - [ - "gene_synonym", - "ECK0954" - ], - [ - "gene_synonym", - "mgs" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A731" - ], - [ - "gene_synonym", - "yccG" - ], - [ - "gene_synonym", - "JW5129" - ], - [ - "gene_synonym", - "NP_415483.2" - ], - [ - "gene_synonym", - "mgsA" - ], - [ - "gene_synonym", - "EcoGene:EG12307" - ] - ], - "dna_sequence": "ATGGAACTGACGACTCGCACTTTACCTGCGCGGAAACATATTGCGCTGGTGGCACACGATCACTGCAAACAAATGCTGATGAGCTGGGTGGAACGGCATCAACCGTTACTGGAACAACACGTACTGTATGCAACAGGCACTACCGGTAACTTAATTTCCCGCGCGACCGGCATGAACGTCAACGCGATGTTGAGTGGCCCAATGGGGGGTGACCAGCAGGTTGGCGCATTGATCTCAGAAGGGAAAATTGATGTATTGATTTTCTTCTGGGATCCACTAAATGCCGTGCCGCACGATCCTGACGTGAAAGCCTTGCTGCGTCTGGCGACGGTATGGAACATTCCGGTCGCCACCAACGTGGCAACGGCAGACTTCATAATCCAGTCGCCGCATTTCAACGACGCGGTCGATATTCTGATCCCCGATTATCAGCGTTATCTCGCGGACCGTCTGAAGTAA", - "dna_sequence_length": 459, - "functions": [ - "methylglyoxal synthase" - ], - "id": "CDS_944", - "location": [ - [ - "NC_000913", - 1027015, - "-", - 459 - ] - ], - "md5": "67ca7571a170cc5981b5d478b8d87b0e", - "parent_gene": "", - "protein_md5": "0b784f1e718cda3780049f188bca61c1", - "protein_translation": "MELTTRTLPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVATADFIIQSPHFNDAVDILIPDYQRYLADRLK", - "protein_translation_length": 152, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yccT" - ], - [ - "gene_synonym", - "b0964" - ], - [ - "gene_synonym", - "JW0947" - ], - [ - "gene_synonym", - "NP_415484.1" - ], - [ - "gene_synonym", - "EcoGene:EG13722" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8X4" - ], - [ - "gene_synonym", - "ECK0955" - ], - [ - "gene_synonym", - "GI:16128931" - ], - [ - "gene_synonym", - "ASAP:ABE-0003262" - ], - [ - "gene_synonym", - "GeneID:945577" - ] - ], - "dna_sequence": "ATGAAAACCGGCATCGTGACCACCTTGATTGCATTATGTTTGCCGGTATCCGTTTTTGCCACCACGCTGCGGCTTTCAACCGATGTCGATCTTCTGGTACTCGACGGCAAGAAGGTTTCCAGCTCTCTGCTGCGCGGTGCGGACAGCATTGAACTGGATAATGGACCGCATCAGTTAGTGTTTCGCGTTGAGAAGACGATTCATCTTTCCAATAGTGAAGAACGGCTGTATATCTCCCCACCGCTGGTGGTCAGTTTTAATACCCAGCTCATCAACCAGGTCAATTTTCGCCTGCCTCGCCTGGAGAATGAGCGGGAAGCTAACCATTTTGATGCCGCGCCGCGCCTTGAATTGTTGGATGGCGATGCGACGCCGATTCCGGTAAAGCTGGATATTCTCGCCATTACCTCAACGGCAAAAACGATTGATTATGAGGTCGAGGTTGAACGCTATAACAAATCCGCGAAACGCGCTTCACTACCGCAATTTGCCACGATGATGGCAGATGACAGTACGCTGCTTTCGGGTGTTTCCGAGCTGGATGCTATTCCACCGCAGTCTCAGGTGCTCACAGAACAACGGCTGAAGTATTGGTTTAAACTGGCTGACCCACAAACGCGAAATACTTTCCTGCAGTGGGCGGAAAAACAACCATCTTCCTGA", - "dna_sequence_length": 663, - "functions": [ - "UPF0319 family protein" - ], - "id": "CDS_945", - "location": [ - [ - "NC_000913", - 1027773, - "-", - 663 - ] - ], - "md5": "7bba9bbafddf57d210f7a174b88cf853", - "parent_gene": "", - "protein_md5": "01f69ff97eb2baf3793e4041dd5e9dfe", - "protein_translation": "MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLENEREANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASLPQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS", - "protein_translation_length": 220, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yccU" - ], - [ - "gene_synonym", - "b0965" - ], - [ - "gene_synonym", - "EcoGene:EG13723" - ], - [ - "gene_synonym", - "ECK0956" - ], - [ - "gene_synonym", - "JW5130" - ], - [ - "gene_synonym", - "GeneID:949008" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75874" - ], - [ - "gene_synonym", - "ASAP:ABE-0003267" - ], - [ - "gene_synonym", - "NP_415485.4" - ], - [ - "gene_synonym", - "GI:90111196" - ] - ], - "dna_sequence": "ATGAAAGAAACCGATATTGCAGGCATTTTAACGTCCACTCACACCATTGCGCTGGTGGGGGCAAGCGACAAACCCGATCGTCCCAGCTATCGCGTGATGAAATATCTACTCGACCAGGGGTATCACGTCATTCCGGTTTCGCCAAAAGTTGCCGGCAAAACGCTGCTGGGCCAGAAGGGGTATGGCACGCTGGCAGACGTTCCGGAAAAAGTCGATATGGTCGATGTTTTCCGTAATTCAGAAGCGGCGTGGGGCGTGGCACAGGAAGCTATTGCCATTGGCGCGAAAACTCTCTGGATGCAACTGGGGGTGATTAATGAGCAAGCGGCAGTACTGGCACGGGATGCCGGGTTAAATGTGGTGATGGATCGCTGCCCGGCTATTGAGATCCCTCGCCTGGGCCTGGCCAAATAA", - "dna_sequence_length": 414, - "functions": [ - "putative CoA-binding protein" - ], - "id": "CDS_946", - "location": [ - [ - "NC_000913", - 1027946, - "+", - 414 - ] - ], - "md5": "cb059e9caccf6a69b8dc0a5f0255a15b", - "parent_gene": "", - "protein_md5": "4b892b3a20ad0325ba607d03b9f71716", - "protein_translation": "MKETDIAGILTSTHTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTLLGQKGYGTLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQLGVINEQAAVLARDAGLNVVMDRCPAIEIPRLGLAK", - "protein_translation_length": 137, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yccV" - ], - [ - "gene_synonym", - "hspQ" - ], - [ - "gene_synonym", - "b0966" - ], - [ - "gene_synonym", - "GI:145698238" - ], - [ - "gene_synonym", - "EcoGene:EG13724" - ], - [ - "gene_synonym", - "ECK0957" - ], - [ - "gene_synonym", - "NP_415486.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB20" - ], - [ - "gene_synonym", - "ASAP:ABE-0003269" - ], - [ - "gene_synonym", - "GeneID:945578" - ], - [ - "gene_synonym", - "JW5970" - ] - ], - "dna_sequence": "ATGATTGCCAGCAAATTCGGTATCGGCCAGCAGGTCCGCCATTCCCTGTTAGGTTATCTCGGAGTGGTCGTGGATATCGACCCGGTTTATTCGCTCTCTGAACCGTCGCCTGATGAGCTGGCGGTGAATGACGAGCTTCGCGCCGCTCCGTGGTATCACGTAGTGATGGAGGACGATAACGGCCTACCGGTTCATACCTACCTGGCTGAAGCCCAGCTAAGTAGCGAATTGCAGGATGAACATCCTGAACAGCCATCCATGGATGAGCTGGCGCAGACCATCCGCAAACAACTCCAGGCCCCGCGTCTGCGTAACTAA", - "dna_sequence_length": 318, - "functions": [ - "heat shock protein involved in degradation of mutant DnaA", - "hemimethylated oriC DNA-binding protein" - ], - "id": "CDS_947", - "location": [ - [ - "NC_000913", - 1028721, - "-", - 318 - ] - ], - "md5": "f28c0bd1f593c101ae2d2ae2c68dba00", - "parent_gene": "", - "protein_md5": "b39bfa938221d3624fb3e59b2337251e", - "protein_translation": "MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPRLRN", - "protein_translation_length": 105, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0958" - ], - [ - "gene_synonym", - "EcoGene:EG13725" - ], - [ - "gene_synonym", - "rlmI" - ], - [ - "gene_synonym", - "b0967" - ], - [ - "gene_synonym", - "GI:145698239" - ], - [ - "gene_synonym", - "ASAP:ABE-0003272" - ], - [ - "gene_synonym", - "yccW" - ], - [ - "gene_synonym", - "NP_415487.4" - ], - [ - "gene_synonym", - "GeneID:946691" - ], - [ - "gene_synonym", - "JW5898" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75876" - ] - ], - "dna_sequence": "ATGAGTGTACGTTTAGTGTTAGCCAAAGGGCGCGAAAAATCATTACTTCGTCGCCATCCGTGGGTCTTTTCCGGGGCCGTTGCCCGCATGGAAGGTAAAGCCAGCCTCGGTGAAACCATCGATATTGTTGATCATCAGGGAAAATGGTTAGCACGCGGCGCTTATTCGCCAGCTTCGCAAATCCGGGCGCGCGTCTGGACGTTTGACCCGTCTGAGTCTATCGACATTGCTTTTTTTTCCCGCCGTTTGCAACAAGCACAAAAATGGCGTGACTGGCTGGCGCAAAAAGATGGCCTCGACAGCTATCGTTTAATCGCCGGAGAATCTGATGGCCTGCCGGGTATTACTATCGATCGTTTCGGTAATTTTCTGGTGCTGCAACTGCTGAGTGCTGGGGCAGAATATCAGCGCGCGGCATTAATTAGTGCCCTGCAAACGCTGTACCCGGAATGTTCGATTTACGATCGCAGCGACGTCGCGGTACGTAAAAAAGAAGGAATGGAGCTGACCCAGGGCCCCGTCACCGGCGAGTTGCCACCTGCCCTGCTGCCGATTGAAGAACACGGAATGAAACTGCTGGTGGATATTCAGCACGGACACAAAACGGGCTACTACCTGGACCAGCGTGATAGCCGCCTGGCTACCCGCCGCTACGTTGAAAATAAACGTGTGCTGAACTGTTTCTCCTATACCGGTGGTTTCGCCGTATCGGCACTGATGGGCGGTTGCAGCCAGGTTGTCAGCGTTGATACCTCCCAGGAAGCGCTGGATATTGCACGGCAGAACGTTGAGCTGAACAAACTGGATCTGAGCAAGGCTGAGTTTGTCCGTGATGATGTCTTTAAATTGCTGCGTACTTATCGCGATCGCGGTGAAAAATTTGACGTTATCGTGATGGACCCGCCGAAGTTTGTTGAGAATAAAAGCCAGTTGATGGGCGCGTGTCGTGGTTATAAAGACATCAACATGCTGGCGATTCAGCTGCTGAATGAAGGCGGTATTCTCCTGACTTTCTCCTGTTCCGGTCTGATGACCAGCGATTTATTTCAGAAAATCATCGCGGATGCCGCAATTGATGCCGGTCGTGATGTACAATTTATAGAGCAGTTCCGTCAGGCAGCCGATCATCCGGTGATCGCTACCTATCCGGAAGGGCTATATCTGAAAGGGTTTGCCTGTCGCGTCATGTAA", 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- [ - "gene_synonym", - "yccX" - ], - [ - "gene_synonym", - "EcoGene:EG13726" - ], - [ - "gene_synonym", - "JW5131" - ], - [ - "gene_synonym", - "GI:16128935" - ], - [ - "gene_synonym", - "GeneID:945304" - ], - [ - "gene_synonym", - "NP_415488.1" - ] - ], - "dna_sequence": "ATGTCGAAAGTCTGCATAATTGCCTGGGTTTACGGGCGAGTTCAGGGCGTAGGATTTCGCTACACCACACAGTACGAAGCGAAAAGACTGGGTTTAACCGGGTACGCCAAAAATCTTGACGATGGCAGCGTGGAAGTGGTTGCTTGCGGTGAAGAAGGGCAGGTGGAAAAATTAATGCAGTGGTTAAAGAGTGGCGGCCCGCGTTCTGCGCGTGTAGAACGGGTGCTCAGCGAGCCGCATCATCCCTCGGGGGAATTAACCGATTTTCGTATCCGTTAA", - "dna_sequence_length": 279, - "functions": [ - "weak acylphosphatase" - ], - "id": "CDS_949", - "location": [ - [ - "NC_000913", - 1030064, - "+", - 279 - ] - ], - "md5": "b348560561e8074a7faa78cb360bdf60", - "parent_gene": "", - "protein_md5": "cd83cab5cc9df4753f5e7611f601ecab", - "protein_translation": "MSKVCIIAWVYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHHPSGELTDFRIR", - "protein_translation_length": 92, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB18" - ], - [ - "gene_synonym", - "JW0952" - ], - [ - "gene_synonym", - "ASAP:ABE-0003278" - ], - [ - "gene_synonym", - "b0969" - ], - [ - "gene_synonym", - "ECK0960" - ], - [ - "gene_synonym", - "GI:90111197" - ], - [ - "gene_synonym", - "EcoGene:EG12876" - ], - [ - "gene_synonym", - "tusE" - ], - [ - "gene_synonym", - "GeneID:945023" - ], - [ - "gene_synonym", - "NP_415489.4" - ], - [ - "gene_synonym", - "yccK" - ] - ], - "dna_sequence": "ATGCTGATCTTCGAAGGTAAAGAGATAGAAACGGATACCGAAGGCTATCTCAAAGAAAGCAGCCAGTGGAGTGAGCCGCTGGCTGTGGTGATTGCAGAGAACGAAGGGATTTCGCTGTCACCGGAACACTGGGAAGTGGTGCGTTTTGTGCGTGATTTCTATCTGGAATTCAATACTTCTCCGGCGATTCGTATGCTGGTAAAAGCGATGGCGAATAAATTTGGCGAAGAAAAAGGTAACAGCCGCTATTTATACCGACTGTTTCCGAAAGGTCCGGCTAAGCAAGCCACCAAAATTGCTGGCCTGCCAAAACCGGTAAAATGTATTTAA", - "dna_sequence_length": 330, - "functions": [ - "mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase" - ], - "id": "CDS_950", - "location": [ - [ - "NC_000913", - 1030668, - "-", - 330 - ] - ], - "md5": "6e5df5f6beedd5881891299820519bb7", - "parent_gene": "", - "protein_md5": "261ee94e79757dc5d341bc860914cd1a", - "protein_translation": "MLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGISLSPEHWEVVRFVRDFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGLPKPVKCI", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0961" - ], - [ - "gene_synonym", - "b0970" - ], - [ - "gene_synonym", - "JW0953" - ], - [ - "gene_synonym", - "EcoGene:EG11113" - ], - [ - "gene_synonym", - "NP_415490.1" - ], - [ - "gene_synonym", - "GI:16128937" - ], - [ - "gene_synonym", - "GeneID:946016" - ], - [ - "gene_synonym", - "yccA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAC6" - ], - [ - "gene_synonym", - "ASAP:ABE-0003280" - ] - ], - "dna_sequence": "ATGGATCGTATTGTTAGTTCTTCACATGACCGTACATCACTGCTTAGCACCCATAAGGTGCTGCGTAATACCTATTTTCTGCTGAGCCTGACGCTGGCCTTTTCGGCGATTACCGCAACTGCCAGTACGGTGCTGATGCTGCCATCTCCGGGTCTGATTCTGACGCTGGTGGGTATGTATGGTTTGATGTTCCTGACCTATAAAACGGCGAATAAGCCGACCGGGATTATCTCCGCATTCGCCTTTACCGGTTTTCTGGGTTATATCCTCGGACCTATTCTGAACACCTATCTGTCTGCCGGAATGGGTGACGTAATCGCTATGGCACTGGGCGGAACGGCGTTAGTGTTCTTCTGCTGCTCTGCATATGTGCTGACCACCCGCAAAGATATGTCGTTCCTCGGCGGTATGCTGATGGCGGGTATTGTGGTGGTGCTGATTGGTATGGTTGCGAATATCTTCCTGCAGCTGCCTGCTCTGCATCTGGCGATCAGCGCGGTCTTCATTCTGATCTCCTCTGGCGCTATCTTGTTTGAAACCAGCAACATCATTCATGGCGGTGAGACGAACTATATTCGTGCCACGGTTAGCCTGTATGTTTCGCTGTACAACATCTTCGTCAGCCTGCTGAGCATTCTGGGCTTCGCTAGCCGCGATTAA", - "dna_sequence_length": 660, - "functions": [ - "Modulator of FtsH protease, inner membrane protein" - ], - "id": "CDS_951", - "location": [ - [ - "NC_000913", - 1031418, - "-", - 660 - ] - ], - "md5": "26210ec2a9871cfaab29dfb1ef1e9b03", - "parent_gene": "", - "protein_md5": "876dc3992dc25108fa8cc0e9b1bc8d16", - "protein_translation": "MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGMGDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILFETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASRD", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0963" - ], - [ - "gene_synonym", - "EcoGene:EG10468" - ], - [ - "gene_synonym", - "hyaA" - ], - [ - "gene_synonym", - "b0972" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69739" - ], - [ - "gene_synonym", - "NP_415491.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003286" - ], - [ - "gene_synonym", - "GI:16128938" - ], - [ - "gene_synonym", - "GeneID:945579" - ], - [ - "gene_synonym", - "JW0954" - ] - ], - "dna_sequence": "ATGAATAACGAGGAAACATTTTACCAGGCCATGCGGCGTCAGGGCGTTACCCGGCGCAGCTTTCTCAAATATTGTAGTCTGGCTGCCACGTCGCTGGGATTAGGCGCGGGAATGGCACCAAAGATTGCCTGGGCGCTGGAGAACAAACCGCGCATTCCGGTGGTATGGATCCACGGTCTGGAATGCACCTGCTGTACCGAATCTTTTATCCGCTCCGCTCACCCACTGGCGAAGGACGTCATCCTTTCCCTGATTTCCCTCGATTACGACGATACTTTGATGGCTGCCGCCGGAACCCAGGCGGAAGAAGTCTTTGAAGACATCATCACGCAATACAATGGCAAATATATCCTCGCAGTAGAAGGTAATCCGCCGCTGGGCGAGCAGGGGATGTTCTGTATCAGCAGCGGTCGACCGTTTATTGAGAAACTCAAACGTGCCGCTGCCGGAGCCAGCGCGATTATCGCCTGGGGAACCTGCGCGTCCTGGGGCTGCGTGCAGGCCGCGCGACCCAATCCGACGCAGGCAACGCCTATCGACAAAGTCATCACCGACAAACCCATTATCAAAGTACCTGGCTGCCCGCCGATCCCGGATGTGATGAGCGCCATCATTACTTACATGGTGACCTTTGATCGCTTGCCAGATGTCGACAGAATGGGCCGTCCGCTGATGTTCTATGGTCAGCGAATCCACGATAAATGCTATCGCCGCGCCCACTTCGACGCCGGAGAGTTCGTCCAGAGTTGGGATGATGACGCTGCCCGCAAAGGTTACTGCCTGTACAAAATGGGCTGCAAAGGGCCTACCACCTATAACGCCTGTTCCTCCACACGCTGGAATGATGGCGTTTCTTTCCCAATCCAGTCTGGTCACGGCTGCCTGGGCTGTGCGGAAAATGGTTTCTGGGATCGCGGTTCGTTCTACAGCCGCGTGGTCGATATTCCGCAAATGGGTACTCATTCCACCGCCGATACCGTCGGTTTAACCGCGCTTGGCGTGGTGGCAGCGGCTGTTGGTGTGCACGCAGTCGCCAGCGCCGTTGACCAGCGCAGACGTCATAACCAGCAACCTACAGAAACCGAACATCAGCCAGGCAATGAGGATAAACAGGCATGA", 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"gene_synonym", - "ECK0964" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACD8" - ], - [ - "gene_synonym", - "ASAP:ABE-0003288" - ], - [ - "gene_synonym", - "GI:16128939" - ], - [ - "gene_synonym", - "b0973" - ] - ], - "dna_sequence": "ATGAGCACTCAGTACGAAACTCAGGGATACACCATCAATAATGCCGGACGCCGCCTGGTGGTCGACCCGATTACGCGCATCGAAGGCCACATGCGCTGCGAAGTGAATATTAACGATCAGAATGTGATCACCAATGCCGTCTCCTGCGGCACCATGTTTCGCGGGCTGGAGATCATCCTACAAGGGCGCGACCCGCGCGATGCGTGGGCGTTCGTTGAACGTATCTGCGGCGTCTGTACTGGCGTACACGCCCTGGCTTCGGTTTACGCCATCGAAGATGCTATCGGTATTAAAGTGCCGGACAACGCCAATATCATCCGCAACATTATGCTGGCAACGCTCTGGTGCCACGATCATCTGGTGCACTTCTATCAGCTTGCCGGGATGGACTGGATCGATGTGTTAGATGCGCTGAAAGCCGACCCGCGGAAAACCTCCGAACTGGCGCAAAGTCTCTCCTCTTGGCCGAAATCATCCCCTGGCTATTTCTTCGACGTACAAAACCGCCTGAAAAAATTTGTTGAAGGCGGGCAGTTGGGGATCTTCCGCAATGGCTACTGGGGGCACCCGCAGTACAAACTGCCGCCAGAAGCTAACCTGATGGGCTTTGCCCACTATCTCGAAGCTCTCGATTTCCAGCGTGAAATTGTCAAAATCCACGCGGTCTTTGGCGGTAAAAACCCGCATCCAAACTGGATTGTCGGCGGGATGCCTTGCGCCATCAACATTGACGAAAGCGGCGCGGTCGGGGCAGTCAATATGGAACGCCTGAACCTGGTGCAGTCAATTATCACCCGCACGGCGGACTTCATTAACAACGTGATGATCCCCGACGCCTTAGCCATCGGTCAGTTCAACAAACCGTGGAGCGAAATCGGCACTGGTCTTTCTGATAAATGCGTTCTCAGCTACGGCGCATTCCCGGATATTGCCAACGACTTTGGCGAGAAAAGTCTGCTGATGCCTGGCGGCGCGGTGATTAACGGCGACTTCAACAATGTGCTGCCAGTGGATTTGGTTGATCCGCAGCAGGTGCAGGAGTTTGTCGACCACGCCTGGTATCGATATCCCAACGATCAGGTCGGGCGTCATCCGTTCGATGGCATCACCGACCCGTGGTACAACCCCGGCGATGTCAAAGGCAGCGATACCAACATTCAGCAGCTGAATGAACAGGAACGCTACTCGTGGATCAAAGCGCCACGCTGGCGCGGTAACGCGATGGAAGTGGGGCCGCTGGCGCGCACGTTAATCGCTTATCACAAAGGCGATGCTGCGACCGTTGAGTCGGTCGATCGCATGATGTCGGCGTTGAACCTGCCGCTTTCCGGTATCCAGTCAACGTTAGGCCGCATTTTGTGCCGCGCGCACGAAGCGCAGTGGGCCGCAGGTAAGTTGCAGTATTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCAAAATGGCGATCCCCGAGCAACCGCTGGAGATCCTGCGTACTCTGCACAGCTTTGACCCGTGCCTCGCCTGTTCAACACACGTGCTGGGCGACGACGGTAGCGAGCTGATCTCCGTGCAGGTGCGTTAA", 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- "gene_synonym", - "GI:16128940" - ], - [ - "gene_synonym", - "hyaC" - ], - [ - "gene_synonym", - "b0974" - ], - [ - "gene_synonym", - "ECK0965" - ], - [ - "gene_synonym", - "JW0956" - ], - [ - "gene_synonym", - "GeneID:945581" - ], - [ - "gene_synonym", - "EcoGene:EG10470" - ], - [ - "gene_synonym", - "NP_415493.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAM1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003290" - ] - ], - "dna_sequence": "ATGCAACAGAAAAGCGACAACGTTGTCAGCCACTATGTCTTTGAAGCGCCAGTGCGCATCTGGCACTGGTTGACGGTGTTATGCATGGCGGTGTTGATGGTCACCGGATACTTTATCGGCAAGCCGCTACCTTCCGTCAGCGGCGAGGCGACGTATCTGTTCTATATGGGCTACATCAGGTTAATTCACTTCAGCGCCGGGATGGTTTTTACCGTGGTTTTGCTGATGCGGATCTACTGGGCTTTTGTTGGCAATCGATACTCCCGCGAGCTGTTTATCGTGCCGGTATGGCGTAAAAGCTGGTGGCAGGGCGTGTGGTATGAAATCCGCTGGTATCTGTTTCTGGCAAAACGTCCGAGTGCCGATATAGGCCATAATCCCATCGCCCAGGCGGCGATGTTCGGCTATTTCCTGATGTCGGTCTTTATGATCATCACTGGTTTTGCGCTGTACAGCGAACACAGCCAGTACGCTATTTTTGCGCCGTTCCGTTATGTGGTGGAATTTTTCTACTGGACGGGTGGCAACTCAATGGACATTCACAGCTGGCATCGGCTGGGGATGTGGCTGATTGGCGCGTTTGTGATCGGTCATGTCTACATGGCGCTGCGTGAAGACATCATGTCCGACGACACGGTGATCTCCACCATGGTCAACGGCTACCGTAGCCACAAATTTGGCAAAATAAGTAACAAGGAGCGTTCATGA", - "dna_sequence_length": 708, - "functions": [ - "hydrogenase 1, b-type cytochrome subunit" - ], - "id": "CDS_954", - "location": [ - [ - "NC_000913", - 1035066, - "+", - 708 - ] - ], - "md5": "40445378b1eab7fa1c633b09a4f0c8b6", - "parent_gene": "", - "protein_md5": "ab1cbcd0eedf4d4c97cc1238f46674f4", - "protein_translation": "MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLPSVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWWQGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIFAPFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDDTVISTMVNGYRSHKFGKISNKERS", - "protein_translation_length": 235, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128941" - ], - [ - "gene_synonym", - "b0975" - ], - [ - "gene_synonym", - "ECK0966" - ], - [ - "gene_synonym", - "JW0957" - ], - [ - "gene_synonym", - "NP_415494.1" - ], - [ - "gene_synonym", - "hyaD" - ], - [ - "gene_synonym", - "EcoGene:EG10471" - ], - [ - "gene_synonym", - "GeneID:945575" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P19930" - ], - [ - "gene_synonym", - "ASAP:ABE-0003292" - ] - ], - "dna_sequence": "ATGAGCGAGCAACGCGTGGTGGTCATGGGGCTGGGCAACCTGCTGTGGGCCGATGAAGGCTTCGGCGTGCGGGTGGCGGAACGGCTGTATGCCCATTACCACTGGCCCGAGTATGTGGAGATTGTCGATGGCGGTACTCAGGGACTGAACTTGCTGGGGTATGTCGAAAGCGCCAGCCATCTGTTGATTCTCGATGCCATTGACTACGGGCTGGAACCTGGAACGCTGCGAACCTATGCCGGAGAACGCATTCCGGCTTATCTCAGCGCGAAGAAAATGAGCCTGCATCAGAACAGTTTCTCCGAAGTGTTGGCGCTGGCGGATATCCGCGGACATCTGCCAGCACATATTGCCCTCGTCGGTCTGCAACCCGCAATGCTCGACGACTACGGCGGTAGCCTGAGCGAACTGGCACGGGAGCAACTGCCCGCTGCGGAACAGGCGGCGCTGGCGCAGCTTGCTGCGTGGGGAATTGTGCCGCAACCGGCTAATGAATCGCGCTGTCTCAATTATGACTGTCTGTCGATGGAAAATTACGAAGGCGTTCGCTTGCGCCAGTACCGGATGACACAGGAGGAGCAGGGATGA", - "dna_sequence_length": 588, - "functions": [ - "hydrogenase 1 maturation protease" - ], - "id": "CDS_955", - "location": [ - [ - "NC_000913", - 1035770, - "+", - 588 - ] - ], - "md5": "e26eb96ebd9dc5dad5e0909af4dd4528", - "parent_gene": "", - "protein_md5": "5952a411eac57271b825b8d39b72bef0", - "protein_translation": "MSEQRVVVMGLGNLLWADEGFGVRVAERLYAHYHWPEYVEIVDGGTQGLNLLGYVESASHLLILDAIDYGLEPGTLRTYAGERIPAYLSAKKMSLHQNSFSEVLALADIRGHLPAHIALVGLQPAMLDDYGGSLSELAREQLPAAEQAALAQLAAWGIVPQPANESRCLNYDCLSMENYEGVRLRQYRMTQEEQG", - "protein_translation_length": 195, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0976" - ], - [ - "gene_synonym", - "GI:16128942" - ], - [ - "gene_synonym", - "ECK0967" - ], - [ - "gene_synonym", - "hyaE" - ], - [ - "gene_synonym", - "JW0958" - ], - [ - "gene_synonym", - "EcoGene:EG10472" - ], - [ - "gene_synonym", - "GeneID:945573" - ], - [ - "gene_synonym", - "NP_415495.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P19931" - ], - [ - "gene_synonym", - "ASAP:ABE-0003294" - ] - ], - "dna_sequence": "ATGAGCAACGACACGCCATTTGATGCGTTGTGGCAACGAATGCTGGCGCGCGGCTGGACGCCAGTCAGTGAATCCCGTCTTGACGACTGGCTTACGCAAGCGCCAGACGGCGTGGTGTTATTAAGCAGTGACCCGAAACGCACGCCAGAGGTCAGCGATAATCCGGTAATGATTGGCGAATTACTGCGCGAGTTTCCCGACTATACATGGCAGGTGGCGATTGCTGACCTTGAGCAGAGCGAAGCCATCGGCGATCGCTTTGGCGTCTTTCGCTTTCCTGCCACTTTAGTGTTTACCGGCGGAAACTATCGCGGCGTGCTGAATGGTATTCACCCGTGGGCGGAACTGATAAACCTGATGCGCGGGCTTGTCGAACCGCAGCAGGAGCGTGCCTCATGA", - "dna_sequence_length": 399, - "functions": [ - "putative HyaA chaperone" - ], - "id": "CDS_956", - "location": [ - [ - "NC_000913", - 1036354, - "+", - 399 - ] - ], - "md5": "6a3ba37f2bf824d37318127a754a98b0", - "parent_gene": "", - "protein_md5": "c79a8d3d94a915e99f5361bf6550c242", - "protein_translation": "MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLREFPDYTWQVAIADLEQSEAIGDRFGVFRFPATLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQERAS", - "protein_translation_length": 132, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b0977" - ], - [ - "gene_synonym", - "GI:16128943" - ], - [ - "gene_synonym", - "hyaF" - ], - [ - "gene_synonym", - "JW0959" - ], - [ - "gene_synonym", - "ECK0968" - ], - [ - "gene_synonym", - "EcoGene:EG10473" - ], - [ - "gene_synonym", - "GeneID:945572" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P19932" - ], - [ - "gene_synonym", - "NP_415496.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003296" - ] - ], - "dna_sequence": "ATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGAACGATGACAGTTTCAGCATGAATCCACTGCCGATCACCTGTCAGGTGAATGATGAACCGAGTATGGCGGCCCTGGAGCAATGTGCTCACAGCCCGCAGGTGATTGCGCTGTTAAACGAGTTACAACATCAACTAAGCGAACGCCAACCGCCGTTGGGCGAGGTGCTGGCAGTCGATCTGTTAAATCTCAACGCCGACGATCGTCACTTTATCAATACGCTTCTCGGGGAAGGGGAAGTGTCAGTGCGCATTCAGCAGGCTGACGACAGTGAAAGTGAAATACAGGAGGCGATCTTCTGCGGATTATGGCGGGTGCGCAGACGTCGCGGCGAAAAGTTGCTGGAGGACAAACTGGAGGCTGGCTGCGCGCCGCTGGCGTTGTGGCAGGCGGCAACGCAAAATCTCTTGCCGACAGATTCGCTGTTACCGCCGCCCATTGATGGCCTGATGAATGGCCTACCGTTGGCGCATGAGTTACTGGCACATGTACGTAACCCCGACGCGCAGCCGCACAGCATTAATCTGACGCAATTACCCATCAGCGAGGCTGATCGGCTTTTTCTCTCACGTCTCTGTGGGCCGGGAAATATTCAGATTCGTACCATTGGCTATGGCGAGAGCTATATCAACGCCACGGGGTTACGCCATGTCTGGCATTTACGCTGTACGGACACCTTAAAAGGCCCGTTACTGGAAAGTTATGAAATCTGCCCAATACCGGAAGTGGTGCTGGCAGCGCCAGAAGATTTGGTCGACTCTGCGCAGCGGCTTAGCGAGGTATGTCAGTGGCTGGCGGAAGCTGCACCGACGTAA", - "dna_sequence_length": 858, - "functions": [ - "hydrogenase-1 protein nickel incorporation factor" - ], - "id": "CDS_957", - "location": [ - [ - "NC_000913", - 1036749, - "+", - 858 - ] - ], - "md5": "75f318943dfae2fb677b12522a829041", - "parent_gene": "", - "protein_md5": "e2231f6b4a0bfe34b70b06836a27339f", - "protein_translation": "MSETFFHLLGPGTQPNDDSFSMNPLPITCQVNDEPSMAALEQCAHSPQVIALLNELQHQLSERQPPLGEVLAVDLLNLNADDRHFINTLLGEGEVSVRIQQADDSESEIQEAIFCGLWRVRRRRGEKLLEDKLEAGCAPLALWQAATQNLLPTDSLLPPPIDGLMNGLPLAHELLAHVRNPDAQPHSINLTQLPISEADRLFLSRLCGPGNIQIRTIGYGESYINATGLRHVWHLRCTDTLKGPLLESYEICPIPEVVLAAPEDLVDSAQRLSEVCQWLAEAAPT", - "protein_translation_length": 285, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P26459" - ], - [ - "gene_synonym", - "GI:16128944" - ], - [ - "gene_synonym", - "NP_415497.1" - ], - [ - "gene_synonym", - "cbdA" - ], - [ - "gene_synonym", - "GeneID:945585" - ], - [ - "gene_synonym", - "JW0960" - ], - [ - "gene_synonym", - "ASAP:ABE-0003300" - ], - [ - "gene_synonym", - "cyxA" - ], - [ - "gene_synonym", - "EcoGene:EG11380" - ], - [ - "gene_synonym", - "b0978" - ], - [ - "gene_synonym", - "appC" - ], - [ - "gene_synonym", - "ECK0969" - ] - ], - "dna_sequence": "ATGTGGGATGTCATTGATTTATCGCGCTGGCAGTTTGCTCTGACCGCGCTGTATCACTTTTTATTTGTACCCCTTACCCTGGGGCTGATTTTTTTGCTGGCTATTATGGAAACCATTTACGTGGTCACCGGCAAAACAATCTACCGCGATATGACGCGCTTCTGGGGTAAGCTCTTCGGTATCAATTTTGCTCTTGGCGTGGCTACCGGCCTGACCATGGAGTTTCAGTTTGGTACTAACTGGTCATTCTATTCCAACTATGTGGGCGATATTTTTGGCGCACCGCTGGCGATGGAAGCATTAATGGCCTTCTTCCTCGAATCCACCTTTGTCGGGCTGTTCTTCTTCGGCTGGCAACGGCTGAATAAATACCAGCACCTGCTGGTGACGTGGCTGGTGGCGTTCGGTTCAAATCTCTCTGCGTTGTGGATATTGAATGCCAACGGTTGGATGCAATACCCGACCGGTGCGCATTTTGATATCGACACCCTGCGTATGGAGATGACCAGCTTCAGCGAGCTGGTCTTTAATCCGGTCAGCCAGGTGAAATTTGTGCACACCGTAATGGCGGGCTACGTGACCGGGGCCATGTTTATTATGGCGATCAGCGCCTGGTATTTACTGCGCGGACGGGAGCGCAATGTCGCATTACGCTCGTTTGCCATCGGTTCCGTCTTCGGTACTCTGGCGATTATCGGTACCCTGCAACTCGGAGACAGTTCTGCGTATGAAGTCGCGCAAGTACAACCGGTAAAACTGGCGGCGATGGAAGGGGAGTGGCAAACGGAACCTGCACCTGCACCGTTCCATGTGGTTGCCTGGCCGGAACAGGATCAAGAGCGTAACGCCTTTGCCCTCAAAATTCCCGCGCTGCTAGGGATCCTCGCCACTCACTCATTAGATAAACCCGTGCCGGGTCTGAAGAATTTGATGGCTGAAACCTACCCACGCTTGCAACGCGGACGTATGGCCTGGCTGTTAATGCAGGAAATATCGCAAGGCAATCGTGAGCCGCATGTGTTGCAGGCATTCCGGGGACTGGAAGGTGACCTGGGCTACGGCATGTTGCTCTCCCGCTATGCGCCGGATATGAATCATGTCACAGCCGCACAGTACCAGGCGGCGATGCGTGGCGCGATACCTCAGGTTGCGCCGGTATTCTGGAGTTTCCGCATCATGGTGGGCTGTGGTTCCCTGCTGCTACTGGTGATGCTGATTGCGCTTGTCCAGACGCTGCGTGGCAAAATCGACCAGCATCGCTGGGTGCTGAAAATGGCGCTCTGGAGTTTGCCGTTGCCGTGGATTGCGATTGAAGCCGGGTGGTTTATGACCGAGTTTGGTCGTCAGCCGTGGGCGATACAGGACATCTTACCGACATACTCCGCGCACTCCGCTTTAACCACAGGACAACTGGCTTTCTCACTGATCATGATCGTAGGGCTTTACACCCTGTTCTTAATCGCCGAAGTCTACCTGATGCAGAAATATGCCCGTCTGGGGCCGAGCGCGATGCAGAGTGAACAACCGACGCAGCAACAGGGGTAA", 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"UniProtKB/Swiss-Prot:P26458" - ], - [ - "gene_synonym", - "GI:16128945" - ], - [ - "gene_synonym", - "EcoGene:EG11379" - ], - [ - "gene_synonym", - "cbdB" - ], - [ - "gene_synonym", - "NP_415498.1" - ], - [ - "gene_synonym", - "JW0961" - ], - [ - "gene_synonym", - "b0979" - ], - [ - "gene_synonym", - "ASAP:ABE-0003302" - ], - [ - "gene_synonym", - "appB" - ], - [ - "gene_synonym", - "cyxB" - ], - [ - "gene_synonym", - "GeneID:947547" - ] - ], - "dna_sequence": "ATGTTTGATTATGAAACATTGCGCTTCATCTGGTGGCTGCTGATTGGCGTGATCCTGGTGGTCTTTATGATCTCCGACGGATTTGACATGGGGATCGGCTGTCTGCTGCCGCTGGTGGCGCGTAATGATGATGAACGCCGGATAGTGATAAACAGCGTTGGTGCACACTGGGAAGGCAACCAGGTCTGGTTGATCCTCGCTGGTGGGGCATTATTTGCCGCCTGGCCCAGAGTGTATGCAGCGGCGTTTTCCGGCTTTTATGTGGCGATGATCCTGGTGCTGTGCTCACTGTTCTTCCGCCCGCTGGCCTTTGATTATCGCGGAAAAATCGCCGATGCACGCTGGCGTAAAATGTGGGACGCCGGTCTGGTCATCGGCAGTCTGGTGCCGCCGGTAGTCTTCGGTATCGCCTTCGGCAACTTGTTGCTCGGCGTGCCGTTTGCCTTCACACCGCAATTACGCGTGGAGTATCTCGGCAGCTTCTGGCAACTGCTGACGCCATTCCCTTTATTGTGCGGATTGCTCAGCCTTGGGATGGTGATTTTGCAAGGTGGCGTCTGGTTACAACTGAAAACTGTTGGTGTGATTCATCTGCGTTCACAGCTGGCGACCAAACGCGCTGCACTGTTGGTGATGCTGTGCTTTTTGCTGGCGGGTTACTGGCTGTGGGTCGGTATTGATGGCTTTGTACTGCTCGCCCAGGATGCTAACGGTCCTTCCAATCCGTTAATGAAACTGGTGGCAGTGCTACCTGGTGCCTGGATGAATAATTTTGTCGAGTCGCCCGTTTTGTGGATCTTCCCGCTGCTGGGATTCTTCTGCCCATTGCTGACGGTGATGGCGATTTATCGTGGTCGCCCGGGTTGGGGATTTTTGATGGCATCATTGATGCAATTTGGCGTGATTTTCACGGCAGGCATCACGCTGTTCCCCTTTGTCATGCCGTCAAGCGTGAGTCCGATCTCCAGCCTGACGTTGTGGGACAGTACTTCCAGTCAGCTGACGCTGAGCATTATGTTGGTAATCGTGCTGATATTTTTGCCCATTGTGTTGCTCTACACTCTCTGGAGCTACTACAAAATGTGGGGGCGCATGACAACAGAAACTCTCCGCCGTAACGAAAACGAGTTGTACTAA", 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"UniProtKB/Swiss-Prot:P24244" - ], - [ - "gene_synonym", - "ECK4402" - ], - [ - "gene_synonym", - "cbdX" - ], - [ - "gene_synonym", - "yccB" - ], - [ - "gene_synonym", - "GI:145698240" - ], - [ - "gene_synonym", - "YP_001165313.1" - ] - ], - "dna_sequence": "ATGTGGTATTTACTTTGGTTCGTCGGCATTTTGTTGATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAA", - "dna_sequence_length": 93, - "functions": [ - "putative cytochrome bd-II oxidase subunit" - ], - "id": "CDS_960", - "location": [ - [ - "NC_000913", - 1040445, - "+", - 93 - ] - ], - "md5": "6a7ea5dedd5f9c190ad69c9be66aa5f4", - "parent_gene": "", - "protein_md5": "ba88ee2c8ffa535d78ee61ad5a098427", - "protein_translation": "MWYLLWFVGILLMCSLSTLVLVWLDPRLKS", - "protein_translation_length": 30, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0971" - ], - [ - "gene_synonym", - "GeneID:946206" - ], - [ - "gene_synonym", - "GI:16128946" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07102" - ], - [ - "gene_synonym", - "ASAP:ABE-0003305" - ], - [ - "gene_synonym", - "EcoGene:EG10049" - ], - [ - "gene_synonym", - "b0980" - ], - [ - "gene_synonym", - "JW0963" - ], - [ - "gene_synonym", - "NP_415500.1" - ], - [ - "gene_synonym", - "appA" - ] - ], - "dna_sequence": "ATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATTCGCTCAGAGTGAGCCGGAGCTGAAGCTGGAAAGTGTGGTGATTGTCAGTCGTCATGGTGTGCGTGCTCCAACCAAGGCCACGCAACTGATGCAGGATGTCACCCCAGACGCATGGCCAACCTGGCCGGTAAAACTGGGTTGGCTGACACCGCGCGGTGGTGAGCTAATCGCCTATCTCGGACATTACCAACGCCAGCGTCTGGTAGCCGACGGATTGCTGGCGAAAAAGGGCTGCCCGCAGTCTGGTCAGGTCGCGATTATTGCTGATGTCGACGAGCGTACCCGTAAAACAGGCGAAGCCTTCGCCGCCGGGCTGGCACCTGACTGTGCAATAACCGTACATACCCAGGCAGATACGTCCAGTCCCGATCCGTTATTTAATCCTCTAAAAACTGGCGTTTGCCAACTGGATAACGCGAACGTGACTGACGCGATCCTCAGCAGGGCAGGAGGGTCAATTGCTGACTTTACCGGGCATCGGCAAACGGCGTTTCGCGAACTGGAACGGGTGCTTAATTTTCCGCAATCAAACTTGTGCCTTAAACGTGAGAAACAGGACGAAAGCTGTTCATTAACGCAGGCATTACCATCGGAACTCAAGGTGAGCGCCGACAATGTCTCATTAACCGGTGCGGTAAGCCTCGCATCAATGCTGACGGAGATATTTCTCCTGCAACAAGCACAGGGAATGCCGGAGCCGGGGTGGGGAAGGATCACCGATTCACACCAGTGGAACACCTTGCTAAGTTTGCATAACGCGCAATTTTATTTGCTACAACGCACGCCAGAGGTTGCCCGCAGCCGCGCCACCCCGTTATTAGATTTGATCAAGACAGCGTTGACGCCCCATCCACCGCAAAAACAGGCGTATGGTGTGACATTACCCACTTCAGTGCTGTTTATCGCCGGACACGATACTAATCTGGCAAATCTCGGCGGCGCACTGGAGCTCAACTGGACGCTTCCCGGTCAGCCGGATAACACGCCGCCAGGTGGTGAACTGGTGTTTGAACGCTGGCGTCGGCTAAGCGATAACAGCCAGTGGATTCAGGTTTCGCTGGTCTTCCAGACTTTACAGCAGATGCGTGATAAAACGCCGCTGTCATTAAATACGCCGCCCGGAGAGGTGAAACTGACCCTGGCAGGATGTGAAGAGCGAAATGCGCAGGGCATGTGTTCGTTGGCAGGTTTTACGCAAATCGTGAATGAAGCACGCATACCGGCGTGCAGTTTGTAA", - "dna_sequence_length": 1299, - "functions": [ - "phosphoanhydride phosphorylase" - ], - "id": "CDS_961", - "location": [ - [ - "NC_000913", - 1040617, - "+", - 1299 - ] - ], - "md5": "8dfd9ec01225f0be73b353b0704b7666", - "parent_gene": "", - "protein_md5": "e701190903cc5eb0eef7b8a96ce4f2ce", - "protein_translation": "MKAILIPFLSLLIPLTPQSAFAQSEPELKLESVVIVSRHGVRAPTKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCPQSGQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNANVTDAILSRAGGSIADFTGHRQTAFRELERVLNFPQSNLCLKREKQDESCSLTQALPSELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNAQFYLLQRTPEVARSRATPLLDLIKTALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGGALELNWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNTPPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEARIPACSL", - "protein_translation_length": 432, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0972" - ], - [ - "gene_synonym", - "GeneID:947409" - ], - [ - "gene_synonym", - "GI:16128947" - ], - [ - "gene_synonym", - "JW0964" - ], - [ - "gene_synonym", - "ASAP:ABE-0003309" - ], - [ - "gene_synonym", - "b0981" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38134" - ], - [ - "gene_synonym", - "NP_415501.1" - ], - [ - "gene_synonym", - "yccC" - ], - [ - "gene_synonym", - "EcoGene:EG11826" - ], - [ - "gene_synonym", - "etk" - ] - ], - "dna_sequence": "ATGACAACTAAAAATATGAATACGCCACCAGGCAGCACTCAGGAAAATGAGATCGATCTGCTTCGTCTGGTCGGCGAGTTATGGGATCACCGTAAGTTTATTATCAGCGTGACCGCGTTATTCACGCTGATCGCTGTCGCTTACTCGCTGTTAAGCACACCAATTTATCAGGCAGATACTCTGGTCCAGGTTGAGCAAAAACAGGGCAACGCCATTCTCAGCGGCCTGAGCGATATGATCCCTAACTCATCGCCCGAGTCTGCACCGGAGATCCAACTGCTGCAATCGCGCATGATTCTCGGTAAAACCATTGCTGAACTGAATCTGCGCGACATAGTTGAGCAGAAGTATTTTCCGATTGTGGGTCGCGGCTGGGCGAGATTAACCAAAGAAAAACCAGGTGAGCTGGCGATCAGCTGGATGCATATTCCACAACTGAATGGTCAGGATCAGCAACTGACACTCACGGTTGGGGAAAACGGCCACTATACACTGGAAGGTGAAGAGTTCACCGTCAATGGTATGGTCGGCCAGCGTCTGGAAAAAGATGGCGTTGCGCTGACTATCGCGGACATTAAGGCCAAACCAGGAACACAGTTTGTCCTGAGCCAGCGTACCGAACTGGAAGCGATTAACGCATTGCAGGAAACCTTTACCGTTAGCGAACGCAGTAAAGAAAGCGGGATGCTGGAACTTACCATGACTGGTGATGATCCCCAGTTGATTACTCGTATTCTGAACAGCATCGCTAACAACTATTTGCAACAGAATATCGCTCGCCAGGCGGCGCAGGATTCACAAAGCCTTGAATTCTTACAGCGCCAGTTACCTGAAGTGCGCAGCGAGCTGGACCAAGCGGAAGAAAAACTCAACGTTTATCGCCAGCAGCGCGATTCGGTTGACCTTAACCTGGAAGCCAAAGCCGTTCTTGAGCAGATTGTGAACGTTGATAATCAACTCAATGAGCTGACCTTCCGCGAGGCAGAGATCTCCCAGCTGTATAAGAAAGATCACCCAACTTATCGTGCGCTGCTGGAAAAACGCCAGACGCTGGAGCAAGAACGCAAACGCCTGAATAAGCGGGTATCGGCAATGCCTTCCACCCAACAGGAAGTGTTGCGTTTAAGTCGTGACGTAGAAGCGGGCCGTGCGGTATATCTGCAATTACTTAACCGCCAGCAGGAGTTGAGTATTTCGAAATCCAGTGCCATTGGTAACGTGCGGATTATCGACCCGGCAGTCACTCAGCCGCAGCCAGTGAAACCGAAAAAAGCGTTGAACGTGGTGCTTGGTTTTATTCTTGGCCTGTTTATTTCTGTGGGTGCCGTGCTGGCGCGTGCGATGTTGCGTCGTGGTGTAGAAGCCCCGGAACAACTGGAAGAGCACGGCATCAGCGTTTATGCCACTATCCCAATGTCCGAGTGGCTGGATAAACGCACCCGTCTGCGTAAGAAAAATTTATTTTCTAATCAGCAGCGCCATCGTACTAAAAATATCCCCTTCCTGGCGGTGGATAACCCGGCGGATTCTGCTGTGGAAGCCGTACGTGCGCTACGAACCAGTCTGCATTTCGCTATGATGGAGACGGAGAATAACATTCTAATGATCACCGGTGCGACGCCAGACAGTGGTAAAACGTTTGTCAGTTCAACTCTGGCAGCGGTGATCGCCCAGTCCGATCAAAAAGTGTTATTTATTGATGCCGACTTACGCCGTGGTTATTCGCATAACCTGTTTACCGTGAGTAATGAACATGGCTTGTCGGAATATCTGGCAGGTAAAGATGAGCTCAACAAAGTGATCCAGCATTTTGGCAAAGGAGGCTTTGATGTGATTACTCGCGGTCAGGTGCCACCTAACCCGTCTGAACTGCTGATGCGCGATCGGATGCGTCAATTACTGGAATGGGCGAACGACCATTACGATCTGGTGATTGTCGATACGCCGCCGATGCTGGCGGTGAGTGATGCCGCGGTCGTGGGGCGTTCTGTTGGCACCAGCCTGCTGGTTGCGCGTTTTGGCTTGAACACCGCCAAAGAGGTGAGTTTGTCAATGCAGCGTCTGGAACAGGCAGGCGTCAATATTAAAGGCGCTATCCTCAATGGTGTGATTAAACGCGCCAGCACCGCTTACAGTTACGGCTATAACTATTACGGTTATAGTTACTCCGAGAAAGAGTAA", 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"MTTKNMNTPPGSTQENEIDLLRLVGELWDHRKFIISVTALFTLIAVAYSLLSTPIYQADTLVQVEQKQGNAILSGLSDMIPNSSPESAPEIQLLQSRMILGKTIAELNLRDIVEQKYFPIVGRGWARLTKEKPGELAISWMHIPQLNGQDQQLTLTVGENGHYTLEGEEFTVNGMVGQRLEKDGVALTIADIKAKPGTQFVLSQRTELEAINALQETFTVSERSKESGMLELTMTGDDPQLITRILNSIANNYLQQNIARQAAQDSQSLEFLQRQLPEVRSELDQAEEKLNVYRQQRDSVDLNLEAKAVLEQIVNVDNQLNELTFREAEISQLYKKDHPTYRALLEKRQTLEQERKRLNKRVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNRQQELSISKSSAIGNVRIIDPAVTQPQPVKPKKALNVVLGFILGLFISVGAVLARAMLRRGVEAPEQLEEHGISVYATIPMSEWLDKRTRLRKKNLFSNQQRHRTKNIPFLAVDNPADSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKVIQHFGKGGFDVITRGQVPPNPSELLMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVVGRSVGTSLLVARFGLNTAKEVSLSMQRLEQAGVNIKGAILNGVIKRASTAYSYGYNYYGYSYSEKE", - "protein_translation_length": 726, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415502.4" - ], - [ - "gene_synonym", - "etp" - ], - [ - "gene_synonym", - "ECK0973" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACZ2" - ], - [ - "gene_synonym", - "b0982" - ], - [ - "gene_synonym", - "yccY" - ], - [ - "gene_synonym", - "EcoGene:EG13727" - ], - [ - "gene_synonym", - "GI:90111198" - ], - [ - "gene_synonym", - "JW5132" - ], - [ - "gene_synonym", - "ASAP:ABE-0003312" - ], - [ - "gene_synonym", - "GeneID:945236" - ] - ], - "dna_sequence": "ATGGCCCAACTAAAATTTAACTCAATCCTGGTGGTTTGTACCGGCAACATTTGCCGTTCGCCCATTGGCGAGCGCTTGCTGCGTAAACGTCTGCCGGGCGTAAAAGTCAAATCGGCAGGTGTTCATGGTCTGGTAAAACACCCTGCAGATGCGACAGCGGCAGATGTTGCCGCTAATCATGGCGTATCTCTTGAAGGACATGCCGGACGTAAGCTCACTGCTGAGATGGCACGAAATTACGATCTGATTCTGGCAATGGAGTCGGAACATATTGCTCAGGTTACCGCAATTGCTCCCGAGGTCCGCGGGAAGACAATGCTGTTTGGGCAATGGCTGGAACAGAAAGAGATCCCGGATCCCTATCGTAAAAGTCAGGACGCATTTGAACATGTCTACGGTATGTTGGAGCGCGCCAGTCAGGAATGGGCGAAGCGCCTCAGCCGGTAA", - "dna_sequence_length": 447, - "functions": [ - "O-antigen capsule forming protein-tyrosine-phosphatase", - "Etk-P dephosphorylase" - ], - "id": "CDS_963", - "location": [ - [ - "NC_000913", - 1044676, - "-", - 447 - ] - ], - "md5": "6acb3dd8e14c7e2a8f1f9c94c5427521", - "parent_gene": "", - "protein_md5": "e708f2101280a7bb3d02956365052fbb", - "protein_translation": "MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGLVKHPADATAADVAANHGVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTAIAPEVRGKTMLFGQWLEQKEIPDPYRKSQDAFEHVYGMLERASQEWAKRLSR", - "protein_translation_length": 148, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A932" - ], - [ - "gene_synonym", - "NP_415503.1" - ], - [ - "gene_synonym", - "ECK0974" - ], - [ - "gene_synonym", - "GI:16128949" - ], - [ - "gene_synonym", - "JW0966" - ], - [ - "gene_synonym", - "b0983" - ], - [ - "gene_synonym", - "yccZ" - ], - [ - "gene_synonym", - "ASAP:ABE-0003317" - ], - [ - "gene_synonym", - "GeneID:945586" - ], - [ - "gene_synonym", - "gfcE" - ], - [ - "gene_synonym", - "EcoGene:EG13728" - ] - ], - "dna_sequence": "ATGAAAAAGAACATTTTTAAGTTTTCGGTACTGACATTGGCTGTTCTGTCTTTGACAGCATGTACCCTTGTTCCTGGTCAGAATTTATCGACCAGTAACAAGGATGTCATTGAACTACCTGACAATCAGTATGACCTGGACAAAATGGTCAATATCTATCCCGTCACGCCAGGATTGATTGATCAGTTGCGCGCCAAACCGATTATGTCGCAGGCTAACCCGGAGCTGGAGCAGCAAATCGCAAACTATGAATATCGTATCGGGATTGGTGATGTGTTGATGGTTACGGTCTGGGATCACCCGGAACTAACCACCCCCGCAGGGCAATACCGTAGCGCCAGTGATACCGGCAACTGGGTTAACGCCGATGGTGCGATTTTCTACCCCTATATTGGTCGCCTGAAAGTGGCCGGGAAAACACTTACCCAGGTACGCAACGAGATTACAGCGCGTCTCGATTCAGTCATTGAAAGCCCGCAAGTCGATGTCAGCGTCGCGGCGTTCCGATCGCAAAAAGCGTACGTCACCGGCGAAGTCAGCAAATCGGGTCAGCAGCCGATTACCAATATTCCTCTGACCATCATGGATGCGATTAACGCCGCGGGCGGTCTGACCGCAGATGCAGACTGGCGCAACGTGGTGCTCACCCAGAATGGCGTAAAGACCAAAGTGAACCTCTATGCGCTGATGCAGCGTGGCGACTTGCGCCAGAACAAACTGCTGCACCCGGGCGATATTTTATTTATTCCGCGCAACGATGATCTGAAAGTCTTCGTGATGGGTGAAGTGGGTAAACAGAGCACGCTGAAAATGGACCGCAGCGGTATGACCCTGGCGGAAGCGCTGGGTAACGCTGAGGGTATGAATCAGGATGTCGCTGATGCGACGGGGATTTTTGTTATTCGTGCAACGCAAAACAAGCAGAATGGCAAAATCGCCAATATTTATCAGCTGAATGCGAAGGACGCATCGGCAATGATACTCGGAACGGAATTCCAGCTTGAACCTTACGACATTGTTTATGTCACTACCGCGCCGCTGGCTCGTTGGAACCGTGTGATTTCTCTGCTGGTACCGACGATTTCCGGGGTGCATGACCTGACAGAGACTTCACGGTGGATTCAAACATGGCCCAACTAA", 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- "gene_synonym", - "JW0967" - ], - [ - "gene_synonym", - "gfcD" - ], - [ - "gene_synonym", - "ymcA" - ], - [ - "gene_synonym", - "ASAP:ABE-0003319" - ], - [ - "gene_synonym", - "GeneID:945588" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75882" - ], - [ - "gene_synonym", - "b0984" - ] - ], - "dna_sequence": "ATGAAGAAGAATTCTTATCTTTTAAGCTGCCTGGCCATTGCCGTCTCCAGTGCCTGTCATGCTGAAGTATTAACCTACCCGGATCCGCTGGGTTCGTCGCAATCAGACTTTGGCGGCACAGGATTGTTGCAGATGCCAAATGCGCGCATCGCACCGGAAGGTGAATTCAGCGTCAACTACCGGGATAACGATCAATACCGGTTCTACTCCACCTCCGTGGCGCTGTTCCCATGGCTGGAAGGCACCATTCGTTATACGGATGTGCGCACACGCAAATATAGCCAGTGGGAAGATTTCAGCGGCGATCAGTCATACAAAGACAAATCATTCGATTTTAAACTTCGCCTGTGGGAAGAAGGTTACTGGCTACCGCAAGTGGCGTTTGGTAAACGTGATATTGCTGGTACGGGTCTGTTTGACGGTGAGTATCTGGTGGCCAGCAAGCAAGCGGGGCCATTTGATTTCACCCTCGGGATGGCATGGGGCTACGCCGGTAATGCGGGCAATATTACCAACCCGTTTTGCCGGGTGAGCGATAAATATTGTCATCGCGCAGAGTCTCACGATGCGGGCGATATCAGCTTTAGCGATATCTTTCGTGGCCCGGCTTCCATCTTTGGCGGCATTGAGTATCAAACGCCGTGGAATCCCCTGCGTCTGAAACTCGAATACGATGGAAACAATTACCAGAATGATTTCGCTGGCAAACTGCCTCAGGCAAGCCATTTCAACGTCGGCGCAGTTTATCGCGCTGCCAGCTGGGCAGATCTCAACCTGAGTTATGAACGCGGTAACACGTTGATGTTTGGCTTCACGTTACGGACCAATTTCAACGATCTGCGCCCTGCCCTGCGCGATACGCCAAAACCGGCATATCAACCTGCGCCTGAATCTGAAGGATTGCAGTACACCACGGTAGCAAACCAACTTACCGCCCTGAAGTATAACGCGGGCTTTGACGCGCCAGAAATTCAGCTACGCGATAAGACACTGTATATGTCTGGTCAGCAATACAAATACCGTGACTCTCGTGAAGCGGTCGATCGTGCCAACCGGATTCTGGTGAATAACCTGCCGCAAGGCGTTGAGAAGATTAGCGTGACGCAAAAGCGCGAGCATATGGCGATGGTGACTACCGAAACCGACGTAGCCAGCCTGCGCAAACAGCTGGCAGGTACAGCGCCTGGTCAATCAGAGCCACTGCAACAACAACGTGTTGAAGCTGAAGATCTTTCTGCCTTTGGTCGGGGCTACCGTATTCGTGAAGATCGCTTTAGCTACTCTTTCAACCCAACACTTTCACAGTCGCTGGGCGGCCCGGAAGATTTCTATATGTTCCAGCTGGGGCTGATGTCCAGTGCCCGCTACTGGTTTACCGACCACCTGCTGCTTGATGGCGGTATTTTCACCAATATTTACAACAACTACGACAAGTTTAAGTCTTCGCTGTTGCCCGCGGACTCTACCCTGCCCCGCGTGCGCACGCATATCCGTGACTACGTTCGCAATGACGTTTATCTCAACAACTTGCAGGCGAACTATTTTGCTGACTTAGGCAATGGTTTCTATGGCCAGGTGTATGGCGGTTATCTGGAAACGATGTACGCCGGTGTCGGTTCCGAGCTGCTTTATCGCCCGCTAGATGCCTGCTGGGCGCTGGGTGTGGACGTTAACTACGTGAAGCAACGTGACTGGGACAACATGATGCGTTTCACCGATTATTCCACGCCAACAGGTTTCGTGACGGCTTACTGGAACCCGCCGACGCTCAATGGCGTACTGATGAAACTTAGCGTTGGGCAATATCTGGCAAAAGATAAAGGCGCAACGATCGACGTCGCCAAACGCTTTGACAGCGGCGTGGCGGTAGGGGTATGGGCGGCAATCAGTAACGTATCTAAAGATGACTACGGCGAAGGCGGCTTTAGTAAAGGTTTTTATATCTCGATTCCATTCGACTTGATGACCATTGGACCTAACCGCAACCGCGCGGTGGTTTCGTGGACACCATTGACGCGTGATGGTGGACAAATGCTGTCACGCAAATACCAGCTCTATCCAATGACGGCAGAGCGAGAAGTACCGGTTGGACAATAA", 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"MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQMPNARIAPEGEFSVNYRDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGDQSYKDKSFDFKLRLWEEGYWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMAWGYAGNAGNITNPFCRVSDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPLRLKLEYDGNNYQNDFAGKLPQASHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTNFNDLRPALRDTPKPAYQPAPESEGLQYTTVANQLTALKYNAGFDAPEIQLRDKTLYMSGQQYKYRDSREAVDRANRILVNNLPQGVEKISVTQKREHMAMVTTETDVASLRKQLAGTAPGQSEPLQQQRVEAEDLSAFGRGYRIREDRFSYSFNPTLSQSLGGPEDFYMFQLGLMSSARYWFTDHLLLDGGIFTNIYNNYDKFKSSLLPADSTLPRVRTHIRDYVRNDVYLNNLQANYFADLGNGFYGQVYGGYLETMYAGVGSELLYRPLDACWALGVDVNYVKQRDWDNMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVGQYLAKDKGATIDVAKRFDSGVAVGVWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPNRNRAVVSWTPLTRDGGQMLSRKYQLYPMTAEREVPVGQ", - "protein_translation_length": 698, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128951" - ], - [ - "gene_synonym", - "EcoGene:EG13730" - ], - [ - "gene_synonym", - "JW0968" - ], - [ - "gene_synonym", - "ECK0976" - ], - [ - "gene_synonym", - "ASAP:ABE-0003321" - ], - [ - "gene_synonym", - "gfcC" - ], - [ - "gene_synonym", - "b0985" - ], - [ - "gene_synonym", - "ymcB" - ], - [ - "gene_synonym", - "NP_415505.1" - ], - [ - "gene_synonym", - "GeneID:944978" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75883" - ] - ], - "dna_sequence": "ATGAATAAATTACAGTCGTATTTCATTGCCAGCGTACTTTACGTAATGACACCCCATGCCTTTGCGCAAGGAACGGTGACTATTTATCTGCCTGGCGAACAACAGACACTTTCCGTTGGCCCCGTGGAAAATGTTGTCCAGTTGGTGACACAACCGCAACTGCGCGATCGCCTCTGGTGGCCTGGTGCCTTGCTGACCGACTCTGCGGCGAAAGCTAAAGCGCTTAAAGACTACCAACATGTCATGGCACAGCTTGCTTCCTGGGAAGCAGAAGCTGACGACGATGTGGCGGCAACGATTAAATCCGTGCGCCAGCAGTTACTCAATCTCAATATCACTGGTCGCTTACCGGTCAAACTGGACCCTGATTTTGTACGAGTGGATGAGAACAGCAATCCCCCGTTGGTCGGGGACTATACGCTCTATACCGTACAGCGTCCGGTGACTATTACTCTGCTGGGTGCGGTTTCTGGGGCCGGGCAATTGCCCTGGCAGGCAGGCCGTAGCGTTACCGATTATCTGCAAGATCACCCCCGCCTTGCAGGCGCGGACAAGAATAACGTTATGGTGATTACGCCTGAGGGTGAGACTGTCGTCGCCCCTGTTGCCCTGTGGAATAAAAGACATGTGGAACCACCGCCTGGCAGCCAGCTTTGGTTGGGCTTTTCTGCGCATGTACTGCCCGAAAAATATGCTGATTTAAATGACCAGATTGTGTCTGTTTTAACGCAACGTGTTCCTGACTGA", - "dna_sequence_length": 747, - "functions": [ - "putative O-antigen capsule production periplasmic protein" - ], - "id": "CDS_966", - "location": [ - [ - "NC_000913", - 1048691, - "-", - 747 - ] - ], - "md5": "04e0f654a0f1577791f9614ec40faaa7", - "parent_gene": "", - "protein_md5": "95c1e9e66d0834c4960ed6e96cc07b99", - "protein_translation": "MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPGEQQTLSVGPVENVVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPD", - "protein_translation_length": 248, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128952" - ], - [ - "gene_synonym", - "JW0969" - ], - [ - "gene_synonym", - "ECK0977" - ], - [ - "gene_synonym", - "gfcB" - ], - [ - "gene_synonym", - "EcoGene:EG13731" - ], - [ - "gene_synonym", - "ASAP:ABE-0003323" - ], - [ - "gene_synonym", - "b0986" - ], - [ - "gene_synonym", - "ymcC" - ], - [ - "gene_synonym", - "NP_415506.1" - ], - [ - "gene_synonym", - "GeneID:949118" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75884" - ] - ], - "dna_sequence": "GTGCGCCCTCTTATTTTATCGATTTTCGCACTATTTCTTGCGGGATGTACGCACAGCCAGCAAAGTATGGTCGATACATTTCGCGCCAGCCTTTTCGATAATCAGGATATCACCGTAGCGGATCAGCAGATCCAGGCGTTGCCTTATTCCACTATGTATTTACGCCTTAATGAAGGGCAACGAATCTTTGTGGTACTGGGATATATAGAACAAGAACAAAGCAAATGGTTATCCCAGGATAACGCCATGCTGGTTACCCACAATGGACGTCTTTTAAAAACCGTCAAACTTAATAATAATCTGCTGGAAGTGACAAATTCCGGGCAGGACCCTCTGCGTAACGCGCTGGCAATAAAAGATGGCAGCCGCTGGACGCGCGATATTCTCTGGAGTGAAGACAACCATTTTCGCTCTGCGACCCTGAGTTCTACTTTTTCCTTTGCTGGATTAGAGACGCTGAATATTGCGGGTCGCAATGTGCTGTGTAATGTCTGGCAGGAAGAGGTGACTTCCACGCGGCCAGAAAAACAGTGGCAAAACACATTCTGGGTCGATTCGGCTACTGGCCAGGTTCGTCAAAGTCGGCAAATGTTAGGCGCAGGGGTTATTCCCGTAGAAATGACGTTTCTTAAACCCGCACCATGA", - "dna_sequence_length": 645, - "functions": [ - "O-antigen capsule production lipoprotein" - ], - "id": "CDS_967", - "location": [ - [ - "NC_000913", - 1049332, - "-", - 645 - ] - ], - "md5": "19ec9bbee64b0c256cc4364eaf568a2b", - "parent_gene": "", - "protein_md5": "a5163e6db4be9eda645462952e9c4ece", - "protein_translation": "MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQIQALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLLEVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNVLCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP", - "protein_translation_length": 214, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945029" - ], - [ - "gene_synonym", - "NP_415507.2" - ], - [ - "gene_synonym", - "ECK0978" - ], - [ - "gene_synonym", - "b0987" - ], - [ - "gene_synonym", - "gfcA" - ], - [ - "gene_synonym", - "ASAP:ABE-0003325" - ], - [ - "gene_synonym", - "GI:90111199" - ], - [ - "gene_synonym", - "JW5133" - ], - [ - "gene_synonym", - "ymcD" - ], - [ - "gene_synonym", - "EcoGene:EG13732" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75885" - ] - ], - "dna_sequence": "ATGAAACACAAGCTTTCTGCAATCCTTATGGCCTTCATGTTGACGACGCCAGCTGCGTTTGCTGCCCCTGAAGCAACAAACGGGACCGAGGCAACGACGGGTACTACTGGCACCACAACGACCACTACCGGCGCAACCACGACTGCTACTACCACTGGTGGCGTGGCTGCTGGCGCTGTCGGCACGGCGACAGTTGTCGGTGTGGCAACGGCTGTTGGTGTGGCGACGTTGGCAGTTGTTGCAGCAAATGACAGTGGCGATGGCGGTTCTCATAACACCTCAACCACCACGTCCACTACACGCTAA", - "dna_sequence_length": 306, - "functions": [ - "O-antigen capsule production threonine-rich inner membrane protein" - ], - "id": "CDS_968", - "location": [ - [ - "NC_000913", - 1049744, - "-", - 306 - ] - ], - "md5": "4c5eb87f858fb297096e9872f6b3aa35", - "parent_gene": "", - "protein_md5": "d7fde3af2a8fc202a7cfcda435aaaac2", - "protein_translation": "MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTGATTTATTTGGVAAGAVGTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR", - "protein_translation_length": 101, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "insA" - ], - [ - "gene_synonym", - "EcoGene:EG40001" - ], - [ - "gene_synonym", - "ECK4531" - ], - [ - "gene_synonym", - "YP_588445.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF10" - ], - [ - "gene_synonym", - "GeneID:1450250" - ], - [ - "gene_synonym", - "b4516" - ], - [ - "gene_synonym", - "GI:94541103" - ], - [ - "gene_synonym", - "ASAP:ABE-0285037" - ] - ], - "dna_sequence": "GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAA", - "dna_sequence_length": 276, - "functions": [ - "IS1 repressor TnpA" - ], - "id": "CDS_969", - "location": [ - [ - "NC_000913", - 1049833, - "+", - 276 - ] - ], - "md5": "0eedacb89276f0524ee56c8eb2e9adbe", - "parent_gene": "", - "protein_md5": "27f7da6e06bb874058543e01b3979d8b", - "protein_translation": "MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR", - "protein_translation_length": 91, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0022" - ], - [ - "gene_synonym", - "ASAP:ABE-0003338" - ], - [ - "gene_synonym", - "insB1" - ], - [ - "gene_synonym", - "b0988" - ], - [ - "gene_synonym", - "GI:16128954" - ], - [ - "gene_synonym", - "NP_415508.1" - ], - [ - "gene_synonym", - "EcoGene:EG40002" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P57998" - ], - [ - "gene_synonym", - "GeneID:945009" - ] - ], - "dna_sequence": "ATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGATACGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGTATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA", - "dna_sequence_length": 504, - "functions": [ - "IS1 transposase B" - ], - "id": "CDS_970", - "location": [ - [ - "NC_000913", - 1050027, - "+", - 504 - ] - ], - "md5": "875ee50b5688ca8bd28d12a1e3d7ade2", - "parent_gene": "", - "protein_md5": "ed8b0f4c937afa9f0516ea91ced6b264", - "protein_translation": "MPGNSPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERYNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945590" - ], - [ - "gene_synonym", - "GI:16128955" - ], - [ - "gene_synonym", - "b0989" - ], - [ - "gene_synonym", - "ECK0979" - ], - [ - "gene_synonym", - "NP_415509.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A982" - ], - [ - "gene_synonym", - "JW5134" - ], - [ - "gene_synonym", - "cspK" - ], - [ - "gene_synonym", - "cspH" - ], - [ - "gene_synonym", - "ASAP:ABE-0003341" - ], - [ - "gene_synonym", - "EcoGene:EG14281" - ] - ], - "dna_sequence": "TTGTCCCGTAAAATGACAGGAATTGTCAAAACCTTTGATCGCAAAAGCGGCAAAGGATTCATTATCCCCTCCGACGGTCGTAAAGAAGTTCAGGTCCATATTTCCGCATTCACTCCCCGCGACGCAGAAGTGCTTATACCAGGATTACGTGTGGAATTTTGCCGCGTAAATGGCCTGCGAGGACCAACAGCGGCAAATGTTTATCTCTCTTAA", - "dna_sequence_length": 213, - "functions": [ - "stress protein, member of the CspA-family" - ], - "id": "CDS_971", - "location": [ - [ - "NC_000913", - 1051175, - "-", - 213 - ] - ], - "md5": "cd568c73b77a15f7544ce5305a9afaa3", - "parent_gene": "", - "protein_md5": "da3a6db81019f324fe1a4adec9e8854f", - "protein_translation": "MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEVLIPGLRVEFCRVNGLRGPTAANVYLS", - "protein_translation_length": 70, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945591" - ], - [ - "gene_synonym", - "ECK0980" - ], - [ - "gene_synonym", - "GI:16128956" - ], - [ - "gene_synonym", - "EcoGene:EG14243" - ], - [ - "gene_synonym", - "NP_415510.1" - ], - [ - "gene_synonym", - "JW0974" - ], - [ - "gene_synonym", - "b0990" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A978" - ], - [ - "gene_synonym", - "cspI" - ], - [ - "gene_synonym", - "cspG" - ], - [ - "gene_synonym", - "ASAP:ABE-0003346" - ] - ], - "dna_sequence": "ATGTCTAATAAAATGACTGGTTTAGTAAAATGGTTTAACGCAGATAAAGGTTTTGGCTTTATCACTCCTGATGATGGCAGCAAAGACGTTTTCGTCCATTTCACCGCCATCCAGAGCAATGAATTCCGCACGCTGAACGAAAATCAGAAAGTTGAATTTTCTATTGAGCAGGGGCAACGTGGCCCCGCGGCAGCGAACGTTGTTACGCTCTAA", - "dna_sequence_length": 213, - "functions": [ - "cold shock protein homolog, cold-inducible" - ], - "id": "CDS_972", - "location": [ - [ - "NC_000913", - 1051461, - "+", - 213 - ] - ], - "md5": "6c2afaa00f9c7b2412055784817f5377", - "parent_gene": "", - "protein_md5": "662e2c654a4d1fc5062f4e29d8747029", - "protein_translation": "MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVVTL", - "protein_translation_length": 70, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0981" - ], - [ - "gene_synonym", - "NP_415511.1" - ], - [ - "gene_synonym", - "GI:16128957" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAA5" - ], - [ - "gene_synonym", - "GeneID:946951" - ], - [ - "gene_synonym", - "b0991" - ], - [ - "gene_synonym", - "JW0975" - ], - [ - "gene_synonym", - "ymcE" - ], - [ - "gene_synonym", - "ASAP:ABE-0003349" - ], - [ - "gene_synonym", - "EcoGene:EG13232" - ], - [ - "gene_synonym", - "sfa" - ] - ], - "dna_sequence": "ATGCGCCGCTGGATTTCACAAAATAATATCAGGCTCCCTCGTGGAGCCTTTTTTATATCTGCCTTATTTTTCTTCAACGCTGTATGTATAGTAAGCGATAACCTGTTGATTATTGAATCTTTCGGGGAGATGGCTTATAACATTTCTTACCTGACCAGGGTACCGGGAACCAACACCTTACTGGCGTGTTGCTGTCTTTTAAGACCAGAAGAGGTTAACAGTGAATATTGA", - "dna_sequence_length": 231, - "functions": [ - "cold shock gene" - ], - "id": "CDS_973", - "location": [ - [ - "NC_000913", - 1051847, - "+", - 231 - ] - ], - "md5": "994b7cf916e78376c9d5a4f66a5da99f", - "parent_gene": "", - "protein_md5": "12d246d8816a6232049dfe3015021a51", - "protein_translation": "MRRWISQNNIRLPRGAFFISALFFFNAVCIVSDNLLIIESFGEMAYNISYLTRVPGTNTLLACCCLLRPEEVNSEY", - "protein_translation_length": 76, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "gnsA" - ], - [ - "gene_synonym", - "EcoGene:EG13233" - ], - [ - "gene_synonym", - "GeneID:1450249" - ], - [ - "gene_synonym", - "JW0976" - ], - [ - "gene_synonym", - "YP_588446.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0285038" - ], - [ - "gene_synonym", - "ECK0982" - ], - [ - "gene_synonym", - "yccL" - ], - [ - "gene_synonym", - "b4517" - ], - [ - "gene_synonym", - "GI:94541104" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC92" - ], - [ - "gene_synonym", - "sfa" - ] - ], - "dna_sequence": "GTGAATATTGAAGAGTTAAAAAAACAAGCCGAAACGGAAATCGCCGACTTTATCGCGCAAAAAATCGCCGAGCTGAACAAGAATACAGGGAAAGAAGTCTCTGAAATTCGCTTCACCGCACGAGAAAAAATGACCGGGCTTGAAAGTTATGATGTCAAAATCAAAATAATGTGA", - "dna_sequence_length": 174, - "functions": [ - "putative phosphatidylethanolamine synthesis regulator" - ], - "id": "CDS_974", - "location": [ - [ - "NC_000913", - 1052067, - "+", - 174 - ] - ], - "md5": "958de10bdf5cb3db828d251027d65f9b", - "parent_gene": "", - "protein_md5": "7dc071c8c8d442a9f02c931831cc7b7e", - "protein_translation": "MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKMTGLESYDVKIKIM", - "protein_translation_length": 57, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0983" - ], - [ - "gene_synonym", - "GI:16128958" - ], - [ - "gene_synonym", - "JW0977" - ], - [ - "gene_synonym", - "EcoGene:EG13234" - ], - [ - "gene_synonym", - "b0992" - ], - [ - "gene_synonym", - "yccM" - ], - [ - "gene_synonym", - "GeneID:946295" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52636" - ], - [ - "gene_synonym", - "ASAP:ABE-0003351" - ], - [ - "gene_synonym", - "NP_415512.1" - ] - ], - "dna_sequence": "ATGGCAGAGAATAAAAGAACCCGCTGGCAGCGGCGGCCAGGCACGACGGGCGGCAAATTACCGTGGAATGACTGGCGTAATGCCACGACCTGGCGTAAAGCGACGCAATTATTACTGTTGGCAATGAATATTTATATTGCCATCACGTTCTGGTATTGGGTGCGCTATTACGAAACGGCAAGTAGCACGACATTTGTCGCCAGACCGGGAGGTATCGAAGGCTGGCTACCGATTGCCGGGCTGATGAATCTGAAATATAGCCTTGTAACAGGTCAGTTACCGTCCGTCCACGCCGCCGCGATGCTGTTATTGGTCGCTTTTATCGTCATCAGTCTATTACTCAAAAAGGCCTTTTGCTCATGGTTATGCCCGGTTGGTACGCTTTCTGAATTAATCGGCGATCTCGGTAACAAACTGTTTGGTCGGCAATGTGTCCTTCCCCGCTGGCTGGATATTCCTCTGCGCGGCGTGAAGTATTTGCTGTTGAGTTTTTTTATCTATATCGCGTTATTGATGCCCGCTCAGGCGATTCACTATTTTATGTTGTCGCCCTACAGCGTGGTGATGGACGTTAAAATGCTCGATTTCTTTCGTCATATGGGGACCGCGACATTAATCAGCGTGACCGTTTTGCTGATTGCCAGCCTGTTTATTCGCCATGCCTGGTGTCGTTATCTTTGCCCATATGGCGCGCTGATGGGCGTGGTTTCGCTATTGTCGCCGTTTAAGATTCGTCGCAATGCCGAAAGTTGTATCGACTGTGGCAAATGCGCAAAAAATTGCCCATCACGGATCCCGGTCGATAAATTAATTCAGGTACGAACAGTGGAATGTACCGGCTGTATGACTTGCGTAGAGTCATGTCCGGTAGCCTCAACATTGACCTTTTCACTGCAAAAACCTGCGGCAAATAAAAAAGCCTTTGCGTTGTCTGGCTGGTTAATGACGCTACTGGTTCTGGGGATTATGTTTGCGGTGATTGGTTACGCAATGTATGCGGGAGTATGGCAAAGCCCGGTGCCGGAGGAATTGTACCGACGCTTAATTCCACAAGCGCCAATGATTGGTCACTAA", 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"gene_synonym", - "NP_415513.2" - ], - [ - "gene_synonym", - "JW5135" - ], - [ - "gene_synonym", - "torS" - ], - [ - "gene_synonym", - "ASAP:ABE-0003354" - ], - [ - "gene_synonym", - "yccI" - ], - [ - "gene_synonym", - "GI:90111200" - ] - ], - "dna_sequence": "GTGAATTTAACCCTGACCCGAAGACTCTGGATGGGCTTTGCCCTGATGGCGCTGTTAACCCTGACCAGTACCCTGGTGGGATGGTACAACCTGCGCTTTATCAGCCAGGTGGAAAAAGACAACACTCAGGCATTGATTCCTACCATGAATATGGCGCGCCAGTTGAGCGAAGCCAGCGCCTGGGAACTTTTCGCCGCGCAGAACCTGACCAGTGCCGATAACGAAAAGATGTGGCAGGCGCAGGGGCGAATGCTCACCGCACAAAGCCTGAAGATTAATGCGTTGCTGCAAGCGTTACGGGAACAAGGTTTTGATACCACCGCTATTGAACAACAGGAGCAGGAGATCTCCCGTTCGTTACGTCAGCAAGGGGAACTGGTGGGGCAGCGTTTGCAACTGCGCCAGCAACAACAGCAACTCAGTCAGCAGATAGTCGCTGCCGCCGATGAGATCGCACGCCTGGCGCAAGGTCAGGCGAATAATGCGACAACTTCCGCTGGAGCGACCCAGGCCGGGATTTACGATTTGATCGAACAAGATCAGCGTCAGGCTGCTGAAAGTGCACTCGATCGGCTGATTGATATCGATCTTGAGTATGTTAACCAGATGAATGAACTGCGCCTTAGCGCTCTGCGGGTGCAGCAAATGGTGATGAATCTGGGGCTGGAGCAGATCCAGAAAAATGCACCAACGCTGGAAAAGCAGCTCAATAATGCGGTGAAAATTCTGCAACGTCGGCAAATACGCATTGAAGATCCGGGTGTTCGTGCGCAGGTCGCAACAACGTTAACTACCGTTAGCCAATATAGCGATTTGCTGGCGCTGTATCAGCAGGACAGTGAAATCAGCAATCACCTACAAACTCTCGCACAAAATAACATCGCCCAGTTCGCGCAGTTTAGTAGCGAAGTCAGTCAGCTGGTCGACACCATTGAGCTGCGTAATCAGCACGGACTGGCGCATCTGGAAAAAGCGAGTGCACGCGGGCAATACAGCCTGTTATTGCTGGGGATGGTTTCACTTTGCGCACTGATTCTGATCCTCTGGCGCGTGGTTTATCGCTCAGTCACGCGTCCACTTGCCGAACAAACGCAGGCGCTGCAACGGCTGCTGGACGGTGATATTGACTCCCCTTTCCCGGAAACCGCTGGCGTACGGGAGCTGGATACCATCGGGCGGCTGATGGATGCGTTTCGCAGCAATGTTCATGCACTGAATCGCCACCGCGAACAGCTGGCGGCGCAGGTCAAAGCGCGTACAGCTGAATTGCAGGAACTGGTGATAGAACACCGACAGGCACGGGCGGAAGCAGAAAAAGCCAGCCAGGCAAAATCGGCGTTTCTGGCGGCGATGAGCCATGAGATCCGCACACCGCTGTACGGTATTCTCGGCACTGCTCAACTGCTGGCAGATAACCCCGCACTTAACGCCCAGCGTGATGATTTGCGGGCAATTACTGACTCTGGTGAATCGTTGCTGACCATCCTCAACGATATTCTCGATTATTCCGCTATCGAAGCAGGTGGCAAGAATGTTTCGGTCAGCGATGAGCCCTTTGAACCGCGCCCGCTGCTGGAAAGTACCCTGCAATTAATGAGCGGACGGGTGAAAGGTCGCCCGATTCGCCTGGCAACGGCAATTGCCGATGATATGCCGTGCGCGTTAATGGGCGATCCACGACGTATTCGTCAGGTTATAACCAACCTGTTGAGCAACGCCCTGCGTTTTACTGACGAAGGGTACATTATCCTGCGTAGTCGCACTGATGGCGAGCAATGGCTGGTCGAAGTGGAAGACAGCGGCTGCGGTATTGATCCCGCGAAACTGGCAGAAATCTTCCAGCCATTTGTGCAGGTAAGCGGCAAACGCGGCGGCACCGGGCTGGGACTGACTATCAGTAGCCGTCTGGCCCAGGCGATGGGCGGCGAACTGAGCGCCACCAGCACGCCGGAGGTTGGAAGCTGTTTTTGTTTACGCTTGCCGTTACGTGTTGCCACGGCACCCGTGCCAAAAACAGTCAATCAGGCGGTGCGTCTTGACGGTTTACGTTTGCTGTTAATTGAAGATAACCCGCTAACCCAGCGAATTACCATTGAGATGCTGAAAACCAGTGGTGCGCAGATTGTTGCTGTTGGCAATGCCGCGCAGGCTTTAGAGACACTGCAAAATAGCGAACCGTTTGCTGCCGCACTGGTGGATTTTGATCTGCCGGATATCGACGGCATTACGCTTGCCCGACAACTGGCACAGCAATATCCGTCGCTGGTTTTGATTGGCTTTAGCGCCCATGTCATTGACGAAACGCTGCGCCAGCGTACCAGTTCATTATTCCGCGGGATTATCCCTAAACCGGTGCCGCGTGAAGTGCTCGGTCAGTTACTGGCGCACTATCTCCAACTGCAAGTCAATAATGATCAATCGCTGGATGTATCGCAACTCAATGAAGATGCTCAGTTAATGGGGACGGAGAAGATCCACGAATGGCTGGTATTATTTACACAACATGCCCTGCCGCTTCTCGATGAAATCGACATTGCCCGCGCCAGTCAGGATAGCGAGAAAATAAAGCGTGCCGCGCATCAGCTAAAAAGCAGTTGCTCGAGTCTGGGAATGCATATCGCCAGCCAGCTATGCGCACAACTGGAGCAGCAGCCATTATCTGCCCCCCTTCCACACGAAGAAATTACACGCAGTGTTGCCGCTCTGGAAGCATGGTTGCATAAGAAAGACCTGAACGCGATTTGA", 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"MNLTLTRRLWMGFALMALLTLTSTLVGWYNLRFISQVEKDNTQALIPTMNMARQLSEASAWELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQGFDTTAIEQQEQEISRSLRQQGELVGQRLQLRQQQQQLSQQIVAAADEIARLAQGQANNATTSAGATQAGIYDLIEQDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVMNLGLEQIQKNAPTLEKQLNNAVKILQRRQIRIEDPGVRAQVATTLTTVSQYSDLLALYQQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRNQHGLAHLEKASARGQYSLLLLGMVSLCALILILWRVVYRSVTRPLAEQTQALQRLLDGDIDSPFPETAGVRELDTIGRLMDAFRSNVHALNRHREQLAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADDMPCALMGDPRRIRQVITNLLSNALRFTDEGYIILRSRTDGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRVATAPVPKTVNQAVRLDGLRLLLIEDNPLTQRITIEMLKTSGAQIVAVGNAAQALETLQNSEPFAAALVDFDLPDIDGITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYLQLQVNNDQSLDVSQLNEDAQLMGTEKIHEWLVLFTQHALPLLDEIDIARASQDSEKIKRAAHQLKSSCSSLGMHIASQLCAQLEQQPLSAPLPHEEITRSVAALEAWLHKKDLNAI", - "protein_translation_length": 914, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0979" - ], - [ - "gene_synonym", - "ECK0985" - ], - [ - "gene_synonym", - "EcoGene:EG12616" - ], - [ - "gene_synonym", - "NP_415514.1" - ], - [ - "gene_synonym", - "torT" - ], - [ - "gene_synonym", - "ASAP:ABE-0003360" - ], - [ - "gene_synonym", - "GeneID:946289" - ], - [ - "gene_synonym", - "b0994" - ], - [ - "gene_synonym", - "GI:16128960" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38683" - ], - [ - "gene_synonym", - "yccH" - ] - ], - "dna_sequence": "ATGCGCGTACTGCTATTTTTACTTCTTTCCCTTTTCATGTTGCCGGCATTTTCGGCTGATAACCTGTTGCGCTGGCATGATGCGCAGCATTTCACGGTGCAAGCCTCTACGCCGCTTAAAGCCAAACGCGCATGGAAACTGTGCGCGCTTTATCCCAGCCTGAAAGATTCATATTGGTTATCGTTGAACTATGGTATGCAGGAGGCTGCTCGCCGCTACGGTGTGGATTTAAAAGTGCTGGAGGCAGGCGGCTACAGCCAGTTGGCTACCCAGCAAGCACAAATCGACCAGTGTAAACAGTGGGGCGCAGAGGCCATTTTGCTCGGTAGTAGCACGACCTCATTTCCCGACCTGCAAAAGCAGGTAGCAAGTCTGCCGGTGATCGAACTGGTAAATGCTATTGATGCTCCCCAGGTGAAAAGCCGCGTTGGTGTGCCCTGGTTTCAGATGGGCTATCAACCGGGGCGATATCTGGTGCAATGGGCGCACGGTAAACCACTGAATGTGCTGTTGATGCCCGGACCCGATAACGCCGGGGGCAGTAAGGAGATGGTCGAGGGTTTTCGCGCAGCCATTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGTAACCTGTTGCAGGAGATGCTGGAACGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATGGGGGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCGGGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTCTGGCAGGGGGAACTGGCGGTTGAGCAGGCCATCAGGCAATTACAGGGGCAATCGGTTTCTGATAATGTCAGCCCACCGATTTTAGTTCTGACGCCGAAAAATGCCGACCGTGAACATATTCGCCGCTCGCTGTCACCAGGGGGATTTCGTCCGGTCTATTTTTATCAGCACACATCAGCGGCTAAGAAATAA", 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- [ - "gene_synonym", - "EcoGene:EG12615" - ], - [ - "gene_synonym", - "ASAP:ABE-0003362" - ], - [ - "gene_synonym", - "torR" - ], - [ - "gene_synonym", - "GI:16128961" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38684" - ] - ], - "dna_sequence": "ATGCCACATCACATTGTTATTGTTGAAGATGAGCCGGTTACCCAGGCGCGATTACAATCCTACTTCACTCAGGAGGGGTATACCGTTTCCGTTACGGCGAGCGGTGCTGGGCTACGGGAAATTATGCAGAATCAGTCGGTAGATTTAATTCTGCTGGATATCAACTTACCCGATGAAAATGGCCTGATGTTAACCCGCGCCCTGCGAGAACGCTCAACGGTGGGGATTATTCTGGTTACCGGACGCAGCGATCGGATTGACCGTATTGTTGGGCTGGAAATGGGCGCAGACGATTACGTCACCAAACCGCTGGAACTGCGCGAACTGGTAGTACGGGTGAAAAATCTGCTCTGGCGAATCGACCTCGCGCGACAAGCTCAACCGCACACTCAGGACAACTGCTATCGCTTTGCCGGTTATTGCCTGAATGTGTCGCGCCATACGCTGGAGCGGGATGGCGAGCCGATTAAACTGACCCGCGCAGAGTATGAAATGTTGGTGGCATTTGTGACGAATCCGGGCGAAATTCTCAGCCGTGAACGTCTGCTACGTATGCTTTCTGCGCGTCGGGTGGAAAACCCTGACCTGCGCACCGTCGATGTGTTAATTCGTCGTTTACGTCATAAACTCAGCGCGGATTTACTGGTGACGCAACATGGTGAAGGTTATTTCTTAGCCGCTGATGTGTGCTGA", - "dna_sequence_length": 693, - "functions": [ - "response regulator in two-component regulatory system with TorS" - ], - "id": "CDS_978", - "location": [ - [ - "NC_000913", - 1057954, - "-", - 693 - ] - ], - "md5": "81ff2e9e354e385ee29d50320e2e3074", - "parent_gene": "", - "protein_md5": "05e09a272b965ca400145d9008ce4b45", - "protein_translation": "MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC", - "protein_translation_length": 230, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "torC" - ], - [ - "gene_synonym", - "ECK0987" - ], - [ - "gene_synonym", - "JW0981" - ], - [ - "gene_synonym", - "b0996" - ], - [ - "gene_synonym", - "EcoGene:EG11815" - ], - [ - "gene_synonym", - "GeneID:946252" - ], - [ - "gene_synonym", - "ASAP:ABE-0003370" - ], - [ - "gene_synonym", - "GI:16128962" - ], - [ - "gene_synonym", - "NP_415516.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33226" - ] - ], - "dna_sequence": "ATGCGGAAACTCTGGAACGCGCTACGCCGACCCAGTGCTCGTTGGTCGGTACTGGCGCTGGTCGCAATTGGGATTGTGATTGGCATTGCGCTGATTGTATTGCCACACGTTGGGATCAAAGTCACCAGCACAACCGAATTTTGTGTCAGTTGCCACAGTATGCAACCGGTGTATGAAGAATATAAACAGTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACACCTGAAAAATTCGAAGCCAAACGCGCGGAACTTGCCGAGCGTGAATGGGCGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCACGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAGTGGTGACACGCTGTACTCTATTGATATTAAGCCAATTTATGCGGCGAAAGGCGATAAAGAAGCCTCTGGTTCTCTGCTGCCTGCTTCGGAAGTGAAAGTCCTTAAACGTGACGGCGACTGGCTGCAAATTGAAATTACCGGCTGGACGGAAAGCGCCGGACGTCAGCGTGTACTCACCCAATTCCCAGGTAAACGCATCTTTGTTGCCTCGATTCGTGGTGATGTGCAGCAGCAGGTAAAAACGCTGGAGAAAACCACCGTTGCCGACACCAATACCGAGTGGAGCAAGTTGCAGGCCACTGCGTGGATGAAGAAAGGCGACATGGTGAACGATATCAAACCGATCTGGGCTTATGCGGATTCGTTGTACAACGGCACCTGTAACCAGTGCCACGGCGCACCGGAAATCGCCCACTTTGACGCTAACGGTTGGATCGGCACGCTCAACGGCATGATTGGCTTTACCAGTCTCGATAAACGTGAAGAACGCACCTTGTTGAAATATCTGCAAATGAATGCGTCTGACACCGCAGGTAAGGCTCACGGCGATAAGAAGGAAGAAAAATAA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P33225" - ], - [ - "gene_synonym", - "ASAP:ABE-0003372" - ], - [ - "gene_synonym", - "JW0982" - ], - [ - "gene_synonym", - "GI:16128963" - ], - [ - "gene_synonym", - "EcoGene:EG11814" - ], - [ - "gene_synonym", - "NP_415517.1" - ] - ], - "dna_sequence": "ATGAACAATAACGATCTCTTTCAGGCATCACGTCGGCGTTTTCTGGCACAACTCGGCGGCTTAACCGTCGCCGGGATGCTGGGGCCGTCATTGTTAACGCCGCGACGTGCGACTGCGGCGCAAGCGGCGACTGACGCTGTCATCTCGAAAGAGGGCATTCTTACCGGGTCGCACTGGGGGGCTATCCGCGCGACGGTGAAGGATGGTCGCTTTGTGGCGGCAAAACCGTTCGAACTGGATAAATATCCGTCGAAAATGATTGCCGGATTGCCGGATCACGTACACAACGCGGCGCGTATTCGTTATCCGATGGTACGCGTGGACTGGCTGCGTAAGCGCCATCTCAGCGATACCTCCCAGCGCGGTGATAACCGTTTTGTGCGCGTGAGCTGGGATGAAGCCCTCGACATGTTCTATGAAGAACTGGAACGCGTGCAGAAAACTCACGGGCCGAGTGCCTTGCTGACCGCCAGTGGTTGGCAATCGACGGGGATGTTCCATAACGCTTCGGGGATGCTGGCGAAAGCTATTGCCTTGCATGGTAATAGCGTTGGTACGGGCGGAGATTACTCTACCGGTGCTGCGCAGGTGATCCTGCCGCGCGTAGTCGGTTCGATGGAAGTGTATGAACAGCAAACCTCCTGGCCGCTGGTATTGCAGAACAGCAAAACCATTGTGCTGTGGGGCTCCGATTTGCTGAAAAACCAGCAAGCGAACTGGTGGTGCCCGGATCACGATGTTTATGAATATTACGCGCAGCTAAAAGCGAAAGTCGCCGCCGGTGAAATTGAGGTCATCAGCATCGATCCGGTTGTCACATCCACCCATGAGTATCTGGGGCGCGAGCATGTGAAGCACATTGCGGTTAACCCGCAAACTGACGTGCCGCTGCAACTGGCGCTGGCACATACGCTGTACAGTGAAAACCTGTACGACAAAAACTTCCTTGCTAACTACTGTGTGGGTTTTGAGCAGTTCCTGCCGTATCTGCTGGGTGAGAAAGACGGTCAGCCGAAAGATGCCGCATGGGCTGAAAAACTGACCGGCATTGATGCCGAAACCATTCGTGGGCTGGCGCGGCAGATGGCGGCGAACAGAACGCAAATTATTGCTGGCTGGTGCGTGCAGCGTATGCAGCACGGTGAACAGTGGGCGTGGATGATTGTGGTTCTGGCGGCGATGCTGGGGCAAATTGGCCTGCCAGGTGGTGGTTTTGGTTTTGGCTGGCACTACAACGGCGCAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGATTCCGCCTGTTCACGACAACAGTGACTACAAAGGCTACAGCAGCACTATTCCGATTGCCCGTTTTATCGATGCGATCCTCGAACCGGGGAAAGTGATCAACTGGAACGGTAAATCGGTAAAACTGCCGCCGCTGAAAATGTGTATTTTTGCCGGAACTAACCCATTCCATCGCCATCAGCAGATCAACCGCATTATTGAAGGCTTGCGCAAGCTGGAAACGGTTATCGCCATAGATAACCAGTGGACCTCAACCTGCCGCTTTGCCGATATCGTACTGCCTGCGACCACGCAGTTTGAGCGTAACGATCTCGACCAGTACGGCAATCACTCCAACCGTGGCATTATCGCCATGAAACAGGTGGTGCCGCCGCAGTTCGAGGCGCGCAACGACTTCGATATTTTCCGCGAGCTGTGCCGTCGCTTTAATCGCGAAGAAGCCTTTACCGAAGGGCTGGACGAAATGGGCTGGCTGAAACGCATCTGGCAGGAAGGTGTACAGCAAGGCAAAGGACGCGGCGTTCATCTGCCAGCGTTTGATGACTTCTGGAATAACAAAGAGTACGTCGAGTTTGACCATCCGCAGATGTTTGTTCGCCACCAGGCATTCCGCGAAGATCCGGATCTCGAACCGCTGGGCACGCCGAGTGGCCTGATTGAGATCTACTCGAAAACTATCGCCGATATGAACTACGACGATTGTCAGGGGCATCCGATGTGGTTTGAGAAAATCGAACGCTCCCACGGTGGGCCTGGCTCGCAAAAGTATCCGTTGCATCTGCAATCTGTGCATCCGGATTTCCGACTTCACTCGCAGTTATGTGAGTCGGAAACGCTGCGTCAGCAATATACGGTAGCGGGTAAAGAGCCAGTATTCATTAACCCGCAGGATGCCAGCGCGCGCGGTATTCGTAACGGTGATGTGGTACGCGTCTTTAACGCTCGCGGTCAGGTGTTGGCAGGGGCAGTGGTTTCTGACCGCTATGCACCCGGCGTGGCACGAATTCACGAAGGGGCATGGTACGATCCAGATAAAGGCGGCGAGCCTGGTGCGCTGTGCAAATACGGTAACCCCAACGTGTTGACCATCGACATCGGTACATCGCAGCTGGCGCAGGCGACCAGTGCGCACACTACGCTGGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGA", 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"MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATDAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGLRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS", - "protein_translation_length": 848, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "torD" - ], - [ - "gene_synonym", - "b0998" - ], - [ - "gene_synonym", - "ECK0989" - ], - [ - "gene_synonym", - "EcoGene:EG12195" - ], - [ - "gene_synonym", - "ASAP:ABE-0003374" - ], - [ - "gene_synonym", - "NP_415518.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36662" - ], - [ - "gene_synonym", - "GeneID:945625" - ], - [ - "gene_synonym", - "GI:16128964" - ], - [ - "gene_synonym", - "JW0983" - ] - ], - "dna_sequence": "ATGACCACGCTGACAGCACAACAGATTGCCTGTGTTTACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTCGTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCGATCTATCTCGAATTGCTCAGCCATCTGCATTTTTCGCTGGGAGAGGGGACCGTTCCTGCGCGAAGAATCGACAGTTTGCGGCAAAAAACACTGACGGCGCTGTGGCAATGGTTACCAGAGTTTGTTGCGCGTTGTCGTCAGTATGACAGCTTTGGTTTTTACGCGGCACTAAGCCAGTTATTGCTGGTGTTAGTGGAGTGCGACCACCAAAACAGATAA", - "dna_sequence_length": 600, - "functions": [ - "TorA-maturation chaperone" - ], - "id": "CDS_981", - "location": [ - [ - "NC_000913", - 1061799, - "+", - 600 - ] - ], - "md5": "0d28aeefd873b52a08f2aad87c369810", - "parent_gene": "", - "protein_md5": "cc98e938aca4e118b6263dd13408b1c6", - "protein_translation": "MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLTAAVNELENRIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTALWQWLPEFVARCRQYDSFGFYAALSQLLLVLVECDHQNR", - "protein_translation_length": 199, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0984" - ], - [ - "gene_synonym", - "b0999" - ], - [ - "gene_synonym", - "GeneID:945597" - ], - [ - "gene_synonym", - "NP_415519.1" - ], - [ - "gene_synonym", - "ECK0990" - ], - [ - "gene_synonym", - "ASAP:ABE-0003377" - ], - [ - "gene_synonym", - "yccD" - ], - [ - "gene_synonym", - "EcoGene:EG12194" - ], - [ - "gene_synonym", - "cbpM" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63264" - ], - [ - "gene_synonym", - "GI:16128965" - ] - ], - "dna_sequence": "ATGGCTAATGTTACGGTGACTTTTACTATTACCGAATTTTGCCTGCATACCGGCATCTCTGAAGAGGAGTTGAATGAAATTGTCGGTTTGGGGGTGGTTGAACCGCGTGAGATCCAGGAAACAACCTGGGTATTTGACGACCATGCCGCCATTGTGGTGCAACGCGCGGTACGCCTGCGTCATGAACTGGCTCTGGACTGGCCGGGGATCGCGGTGGCGCTGACGTTAATGGATGATATTGCGCACCTGAAGCAGGAAAACCGCCTGCTGCGCCAGCGGCTTTCCCGGTTTGTAGCTCATCCGTGA", - "dna_sequence_length": 306, - "functions": [ - "modulator of CbpA co-chaperone" - ], - "id": "CDS_982", - "location": [ - [ - "NC_000913", - 1062855, - "-", - 306 - ] - ], - "md5": "9df846b8626302236ae2845b7b1ffca6", - "parent_gene": "", - "protein_md5": "ea9c872e77944385518df5f5ae7feaab", - "protein_translation": "MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP", - "protein_translation_length": 101, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0985" - ], - [ - "gene_synonym", - "GeneID:947572" - ], - [ - "gene_synonym", - "ECK0991" - ], - [ - "gene_synonym", - "NP_415520.1" - ], - [ - "gene_synonym", - "EcoGene:EG12193" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36659" - ], - [ - "gene_synonym", - "cbpA" - ], - [ - "gene_synonym", - "b1000" - ], - [ - "gene_synonym", - "GI:16128966" - ], - [ - "gene_synonym", - "ASAP:ABE-0003379" - ] - ], - "dna_sequence": "ATGGAATTAAAGGATTATTACGCCATCATGGGCGTGAAACCGACGGACGATCTCAAGACAATCAAGACCGCCTATCGTCGACTTGCCCGCAAATACCATCCTGATGTCAGCAAAGAACCGGATGCCGAAGCCCGCTTCAAAGAGGTCGCTGAAGCCTGGGAAGTGTTAAGTGATGAACAACGTCGCGCTGAGTATGATCAGATGTGGCAACATCGCAACGATCCGCAATTTAACCGTCAGTTCCACCATGGCGACGGTCAGAGTTTTAACGCCGAAGATTTTGACGATATCTTCTCGTCAATTTTCGGTCAGCATGCCCGCCAGAGCCGTCAACGCCCCGCCACACGCGGCCACGATATTGAAATCGAAGTGGCGGTATTCCTCGAAGAAACGCTTACTGAGCATAAGCGTACCATCAGCTATAACCTGCCGGTTTATAACGCCTTTGGCATGATCGAACAGGAAATTCCGAAAACGCTGAATGTGAAGATCCCGGCGGGCGTCGGCAATGGTCAACGCATCCGTCTGAAAGGCCAGGGGACGCCGGGCGAAAACGGCGGTCCAAATGGCGATTTGTGGCTGGTGATTCATATTGCGCCACATCCGCTGTTTGATATTGTCGGCCAGGATCTGGAAATTGTGGTGCCGGTTAGCCCGTGGGAAGCGGCGCTGGGTGCTAAAGTCACCGTTCCAACACTGAAAGAAAGCATTTTGCTGACTATCCCGCCAGGCAGCCAGGCCGGGCAACGATTGCGCGTTAAAGGCAAAGGTCTGGTGAGCAAAAAACAGACCGGCGATCTGTATGCGGTACTGAAAATCGTGATGCCGCCGAAACCGGATGAAAACACTGCCGCGCTGTGGCAGCAACTGGCAGACGCCCAGTCGTCTTTTGATCCACGTAAAGATTGGGGGAAAGCATAA", - "dna_sequence_length": 921, - "functions": [ - "DnaK co-chaperone", - "curved DNA-binding protein" - ], - "id": "CDS_983", - "location": [ - [ - "NC_000913", - 1063775, - "-", - 921 - ] - ], - "md5": "dfd90379de199d47d51099827f10f01b", - "parent_gene": "", - "protein_md5": "603148ec4d7d4becda063da63c3730d0", - "protein_translation": "MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA", - "protein_translation_length": 306, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0986" - ], - [ - "gene_synonym", - "NP_415521.1" - ], - [ - "gene_synonym", - "EcoGene:EG12196" - ], - [ - "gene_synonym", - "GeneID:947468" - ], - [ - "gene_synonym", - "ECK0992" - ], - [ - "gene_synonym", - "yccE" - ], - [ - "gene_synonym", - "ASAP:ABE-0003384" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36661" - ], - [ - "gene_synonym", - "b1001" - ], - [ - "gene_synonym", - "GI:16128967" - ] - ], - "dna_sequence": "ATGGGTAGTAATATACATGGAATTAGTTGCACTGCAAATAATTATTTGAAACAGGCCTGGAACGATATAAAAAATGAGTACGAAAAAAATCAAACATATTCAATCACGCTTTTTGAAAACACACTGGTGTGTTTTATGCGGTTATACAATGAACTCAGACGTAAAGTAAATGAAGAGGATACTCCATGTCTGGAATGTGAATCACTAGAAAAAGAATTTGAGGAAATGCAGAATGATAATGATCTATCATTATTTATGAGAATATTGCGTACTAATGATACACAAATTTATTCAGGGGTTTCAGGAGGTATTACATATACTATACAATATGTTCGAGATATTGATATTGTTAGAGTGTCCTTGCCGGGCAGAGCTTCAGAGTCTATCACAGATTTTAAAGGTTATTATTGGTATAACTTTATGGAGTATATTGAAAACATTAATGCGTGTGATGATGTTTTTTCTGAGTATTGTTTTGATGATGAAAATATAAGTGTCCAGCCAGAGCGGATAAATACGCCGGGAATATCTGATTTGGATTCTGACATTGATTTGTCTGGTATATCTTTTATTCAGCGTGAAACTAACCAGGCATTAGGATTAAAATATGCTCCTGTAGATGGCGATGGATATTGTCTGTTAAGAGCTATACTGGTTTTAAAACAACATGATTATTCATGGGCGCTGGTCAGTTATAAGATGCAAAAGGAAGTTTACAACGAATTCATTAAAATGGTTGATAAAAAAACGATCGAGGCTCTTGTTGATACGGCATTCTATAATCTCAGGGAAGATGTAAAGACGTTATTTGGCGTTGATCTACAATCTGACAACCAAATTCAGGGGCAGAGTAGTCTTATGTCATGGAGCTTTCTGTTTTTTAAAAAACAATTCATTGATAGTTGCTTGAATAACGAAAAATGTATCCTGCATTTACCCGAGTTTATATTTAATGATAACAAGAACTTGCTTGCTTTAGATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAATGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTATGACGTTTACCTCCCTCCTGAACTTTTTGCTCAGGCTTACAAGTTAAACAATAAGGAAATGAATGCGCAACTCGACTATTTAAATCGTTATGCAATTTAA", 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"gene_synonym", - "GeneID:945773" - ], - [ - "gene_synonym", - "GI:16128968" - ], - [ - "gene_synonym", - "EcoGene:EG10033" - ], - [ - "gene_synonym", - "b1002" - ], - [ - "gene_synonym", - "ASAP:ABE-0003388" - ], - [ - "gene_synonym", - "agp" - ] - ], - "dna_sequence": "ATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGGCACAAACCGTACCGGAAGGCTATCAGCTACAGCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCTGGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATATGGGCCATTACATGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACACCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCTTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACCGACAGCTACCAGCTACTGGAAAAAATCGTTAACTATAAAGATTCCCCTGCCTGTAAAGAGAAACAACAGTGTTCGCTGGTGGATGGCAAAAATACCTTTAGCGCCAAGTATCAACAAGAACCAGGTGTTTCCGGGCCGCTGAAAGTCGGCAACTCGCTGGTAGATGCGTTTACTTTGCAATATTACGAAGGTTTTCCGATGGATCAGGTGGCCTGGGGAGAAATCAAATCTGACCAGCAGTGGAAGGTGTTGTCGAAGCTTAAAAACGGCTACCAGGACAGCCTGTTTACCTCACCGGAAGTGGCGCGCAATGTTGCGAAACCGCTGGTCAGTTATATCGACAAAGCTCTGGTCACCGATCGCACCAGCGCACCGAAAATTACAGTGTTGGTTGGGCACGACTCCAACATTGCCTCTCTGTTAACGGCGCTGGATTTCAAACCGTATCAGTTGCATGACCAGAACGAACGCACGCCGATTGGCGGCAAAATCGTTTTCCAGCGTTGGCATGACAGCAAAGCCAATCGCGATTTGATGAAAATTGAATATGTGTATCAGAGTGCGGAACAGTTACGTAATGCCGATGCGTTAACCCTGCAGGCACCTGCGCAGCGTGTGACGCTGGAATTAAGCGGTTGCCCGATAGACGCTGATGGTTTCTGCCCGATGGATAAGTTTGATAGCGTGTTGAATGAAGCGGTGAAATAA", 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"JW0988" - ], - [ - "gene_synonym", - "GI:16128969" - ], - [ - "gene_synonym", - "NP_415523.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003390" - ], - [ - "gene_synonym", - "b1003" - ], - [ - "gene_synonym", - "EcoGene:EG12703" - ], - [ - "gene_synonym", - "yccJ" - ] - ], - "dna_sequence": "ATGCCAACTCAAGAAGCGAAAGCTCATCACGTCGGTGAATGGGCATCTCTGCGCAATACGTCGCCGGAAATAGCCGAGGCCATTTTCGAAGTCGCCGGGTACGACGAAAAAATGGCGGAAAAGATTTGGGAAGAAGGTAGTGATGAAGTGTTAGTCAAAGCCTTTGCTAAGACCGATAAAGATTCGCTTTTTTGGGGCGAACAGACCATCGAACGTAAAAACGTTTAA", - "dna_sequence_length": 228, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_986", - "location": [ - [ - "NC_000913", - 1067091, - "-", - 228 - ] - ], - "md5": "bd359a0f68a355a1cf024043c34a9646", - "parent_gene": "", - "protein_md5": "01f51658daa54b6fce36cc556c007d30", - "protein_translation": "MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV", - "protein_translation_length": 75, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11540" - ], - [ - "gene_synonym", - "NP_415524.1" - ], - [ - "gene_synonym", - "GI:16128970" - ], - [ - "gene_synonym", - "ECK0995" - ], - [ - "gene_synonym", - "JW0989" - ], - [ - "gene_synonym", - "wrbA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8G6" - ], - [ - "gene_synonym", - "GeneID:947263" - ], - [ - "gene_synonym", - "ASAP:ABE-0003392" - ], - [ - "gene_synonym", - "b1004" - ] - ], - "dna_sequence": "ATGGCTAAAGTTCTGGTGCTTTATTATTCCATGTACGGACATATTGAAACGATGGCACGCGCAGTCGCTGAGGGTGCAAGCAAAGTGGATGGCGCTGAAGTTGTCGTTAAGCGTGTACCGGAAACCATGCCGCCGCAATTATTTGAAAAAGCAGGCGGTAAAACGCAAACTGCACCGGTTGCAACCCCGCAAGAACTGGCCGATTACGACGCCATTATTTTTGGTACACCTACCCGCTTTGGCAACATGTCCGGTCAAATGCGTACCTTCCTCGACCAGACGGGCGGCCTGTGGGCTTCCGGCGCACTATACGGAAAACTGGCGAGCGTCTTTAGTTCCACCGGTACTGGCGGCGGTCAGGAACAAACCATCACATCCACCTGGACGACCCTTGCGCATCACGGCATGGTAATTGTCCCTATTGGCTACGCAGCGCAGGAATTATTTGACGTTTCACAGGTTCGCGGCGGTACGCCGTACGGCGCAACCACCATCGCAGGCGGTGACGGTTCACGCCAGCCCAGCCAGGAAGAACTGTCTATTGCTCGTTATCAAGGGGAATATGTCGCAGGTCTGGCAGTTAAACTTAACGGCTAA", - "dna_sequence_length": 597, - "functions": [ - "NAD(P)H:quinone oxidoreductase" - ], - "id": "CDS_987", - "location": [ - [ - "NC_000913", - 1067708, - "-", - 597 - ] - ], - "md5": "e6a76b8ed145ef0039efde1d9e606d73", - "parent_gene": "", - "protein_md5": "0deac7eed1b56ac93421d54513714945", - "protein_translation": "MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG", - "protein_translation_length": 198, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ymdF" - ], - [ - "gene_synonym", - "NP_415525.2" - ], - [ - "gene_synonym", - "ECK0996" - ], - [ - "gene_synonym", - "GI:94541090" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P56614" - ], - [ - "gene_synonym", - "ASAP:ABE-0285039" - ], - [ - "gene_synonym", - "b4518" - ], - [ - "gene_synonym", - "JW5136" - ], - [ - "gene_synonym", - "GeneID:945598" - ], - [ - "gene_synonym", - "EcoGene:EG14358" - ] - ], - "dna_sequence": "ATGGCAAACCATCGAGGCGGTTCCGGCAATTTTGCAGAAGACCGCGAAAGAGCATCAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAG", - "dna_sequence_length": 174, - "functions": [ - "KGG family protein" - ], - "id": "CDS_988", - "location": [ - [ - "NC_000913", - 1068081, - "+", - 174 - ] - ], - "md5": "137e197f1b0d947e5798037637d4b20b", - "parent_gene": "", - "protein_md5": "1dcd6d92651c44a7234a28522f3bf66b", - "protein_translation": "MANHRGGSGNFAEDRERASEAGKKGGQHSGGNFKNDPQRASEAGKKGGKSSHGKSDN", - "protein_translation_length": 57, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003401" - ], - [ - "gene_synonym", - "ECK0997" - ], - [ - "gene_synonym", - "JW5137" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75892" - ], - [ - "gene_synonym", - "NP_415526.4" - ], - [ - "gene_synonym", - "rutG" - ], - [ - "gene_synonym", - "GeneID:946589" - ], - [ - "gene_synonym", - "ycdG" - ], - [ - "gene_synonym", - "GI:90111201" - ], - [ - "gene_synonym", - "EcoGene:EG13853" - ], - [ - "gene_synonym", - "b1006" - ] - ], - "dna_sequence": "ATGGCAATGTTCGGTTTTCCTCACTGGCAGTTAAAATCGACCTCTACAGAGAGCGGCGTGGTCGCGCCGGATGAACGATTGCCGTTTGCTCAGACGGCAGTAATGGGCGTTCAACACGCGGTGGCGATGTTTGGCGCGACGGTGTTAATGCCGATTCTGATGGGGCTGGATCCCAATCTTTCCATTTTAATGTCGGGGATCGGCACGTTACTGTTTTTCTTTATTACCGGCGGGCGCGTCCCCAGTTATCTCGGCTCCAGCGCGGCTTTTGTCGGCGTGGTGATCGCCGCGACGGGCTTTAACGGTCAGGGCATTAACCCGAATATCAGCATTGCGCTGGGCGGGATTATCGCCTGTGGGCTGGTTTATACCGTCATTGGCCTGGTGGTGATGAAAATCGGTACGCGCTGGATTGAACGACTGATGCCGCCGGTGGTGACGGGTGCGGTGGTGATGGCGATTGGCCTGAACTTAGCGCCTATCGCAGTGAAAAGTGTATCGGCTTCGGCCTTTGATAGCTGGATGGCGGTAATGACGGTGCTGTGTATTGGGCTGGTGGCGGTGTTTACCCGTGGCATGATCCAGCGGTTATTGATTCTCGTAGGATTAATTGTCGCCTGTCTGCTGTATGGCGTGATGACCAACGTTTTAGGGCTGGGAAAAGCCGTCGATTTTACTCTCGTCAGCCATGCTGCCTGGTTCGGTCTGCCACATTTTTCCACTCCTGCTTTTAATGGTCAGGCAATGATGCTGATTGCGCCCGTGGCGGTGATTCTGGTGGCGGAAAACTTAGGTCATCTCAAGGCAGTCGCCGGGATGACCGGACGCAATATGGACCCGTATATGGGGCGGGCATTCGTAGGCGATGGTCTGGCAACGATGCTTTCCGGCTCTGTCGGCGGTAGCGGCGTGACCACCTATGCTGAAAATATCGGTGTGATGGCCGTGACCAAAGTCTACTCGACGCTGGTGTTTGTTGCTGCTGCCGTCATCGCCATGCTGTTGGGCTTTTCACCGAAATTTGGTGCGCTGATTCATACCATTCCGGCCGCGGTTATTGGTGGTGCATCAATTGTTGTGTTCGGGCTGATTGCCGTCGCAGGCGCAAGGATATGGGTACAAAACCGTGTCGATTTAAGCCAGAACGGTAATTTGATTATGGTCGCAGTAACCTTAGTGCTGGGCGCGGGTGATTTTGCTCTCACGCTGGGCGGTTTTACGTTGGGAGGGATTGGTACAGCAACCTTTGGCGCGATTTTACTCAATGCGTTGTTAAGCAGAAAGTTGGTTGACGTTCCACCGCCAGAAGTTGTTCATCAGGAGCCATAA", 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"ATGAACGAAGCCGTTAGCCCAGGTGCGCTTAGCACCCTGTTCACCGATGCCCGCACTCACAACGGCTGGCGGGAGACACCCGTCAGCGATGAGACGTTACGGGAGATTTATGCCCTGATGAAATGGGGGCCGACATCAGCTAACTGTTCTCCGGCACGGATCGTGTTTACCCGCACGGCAGAAGGAAAAGAACGTCTGCGCCCGGCACTTTCCAGCGGCAATCTGCAAAAAACCCTGACCGCGCCCGTCACCGCTATCGTCGCCTGGGACAGTGAATTTTATGAACGGTTACCACTACTGTTTCCCCACGGTGATGCCCGCAGTTGGTTTACCTCCAGCCCACAACTTGCCGAAGAAACAGCGTTTCGCAACAGTTCCATGCAGGCGGCCTATCTGATCGTCGCCTGCCGGGCGCTGGGACTGGATACCGGCCCGATGTCGGGCTTTGACCGTCAACACGTGGACGACGCCTTTTTTACGGGCAGCACGCTGAAGAGCAATCTGCTGATTAATATCGGCTATGGCGATAGCAGCAAGCTTTATGCGCGCCTGCCACGTCTGTCCTTTGAAGAAGCCTGCGGGCTGTTGTAA", - "dna_sequence_length": 591, - "functions": [ - "putative malonic semialdehyde reductase" - ], - "id": "CDS_991", - "location": [ - [ - "NC_000913", - 1070955, - "-", - 591 - ] - ], - "md5": "7db3f28dabbd694b79e8adb1a5db5a1e", - "parent_gene": "", - "protein_md5": "39f5840e1d18ec1312d9f6ccdc93848d", - "protein_translation": "MNEAVSPGALSTLFTDARTHNGWRETPVSDETLREIYALMKWGPTSANCSPARIVFTRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPLLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQHVDDAFFTGSTLKSNLLINIGYGDSSKLYARLPRLSFEEACGLL", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16128975" - ], - [ - "gene_synonym", - "JW0994" - ], - [ - "gene_synonym", - "ECK1000" - ], - [ - "gene_synonym", - "GeneID:946586" - ], - [ - "gene_synonym", - "b1009" - ], - [ - "gene_synonym", - "rutD" - ], - [ - "gene_synonym", - "EcoGene:EG13856" - ], - [ - "gene_synonym", - "ycdJ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75895" - ], - [ - "gene_synonym", - "NP_415529.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003410" - ] - ], - "dna_sequence": "ATGAAACTTTCACTCTCACCTCCCCCTTATGCTGATGCGCCCGTAGTGGTGTTGATTTCGGGTCTTGGGGGTAGCGGCAGTTACTGGTTACCGCAACTGGCGGTGCTGGAGCAGGAGTATCAGGTAGTCTGTTACGACCAGCGCGGCACCGGCAATAATCCCGACACGCTGGCAGAAGATTACAGTATCGCCCAGATGGCAGCGGAACTGCATCAGGCGCTGGTAGCCGCAGGGATTGAGCATTACGCAGTGGTCGGCCATGCGCTCGGTGCGCTGGTGGGAATGCAGCTGGCGCTGGATTATCCCGCGTCGGTAACTGTGCTGATCAGCGTTAACGGCTGGCTACGAATAAACGCCCATACGCGCCGCTGTTTTCAGGTTCGCGAACGATTACTGTATAGCGGCGGCGCGCAGGCATGGGTGGAAGCGCAGCCGTTGTTCCTCTATCCCGCCGACTGGATGGCGGCCCGCGCACCTCGCCTGGAGGCAGAAGACGCGCTGGCACTGGCGCATTTTCAGGGCAAAAATAATTTACTGCGTCGACTTAACGCCCTCAAACGCGCTGACTTTAGTCACCATGCGGATCGCATCCGCTGCCCGGTGCAAATCATCTGCGCCAGTGATGATCTGCTGGTGCCAACAGCATGTTCCAGTGAACTTCATGCCGCCCTGCCCGATAGCCAGAAAATGGTGATGCCCTATGGCGGACACGCCTGCAACGTGACCGATCCCGAAACGTTTAATGCTCTGTTACTCAACGGGCTTGCCAGCCTGTTACATCACCGTGAAGCCGCCCTGTAA", - "dna_sequence_length": 801, - "functions": [ - "putative reactive intermediate detoxifying aminoacrylate hydrolase" - ], - "id": "CDS_992", - "location": [ - [ - "NC_000913", - 1071765, - "-", - 801 - ] - ], - "md5": "ade3691d5df1609d7dbf325857ec65ae", - "parent_gene": "", - "protein_md5": "d0f8f1f81c23aed95b845fedae8f557c", - "protein_translation": "MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGGHACNVTDPETFNALLLNGLASLLHHREAAL", - "protein_translation_length": 266, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW0995" - ], - [ - "gene_synonym", - "ECK1001" - ], - [ - "gene_synonym", - "GI:16128976" - ], - [ - "gene_synonym", - "GeneID:945599" - ], - [ - "gene_synonym", - "rutC" - ], - [ - "gene_synonym", - "NP_415530.1" - ], - [ - "gene_synonym", - "EcoGene:EG13857" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFQ5" - ], - [ - "gene_synonym", - "ycdK" - ], - [ - "gene_synonym", - "ASAP:ABE-0003412" - ], - [ - "gene_synonym", - "b1010" - ] - ], - "dna_sequence": "ATGCCAAAATCCGTAATTATTCCCGCTGGCAGCAGCGCACCGCTGGCCCCCTTCGTTCCCGGCACGCTGGCTGATGGCGTGGTGTATGTCTCCGGTACGCTGGCTTTTGATCAACATAATAACGTGCTGTTTGCCGATGACCCAAAGGCGCAAACCCGCCACGTTCTGGAAACTATCCGCAAGGTGATCGAGACGGCGGGTGGCACGATGGCGGATGTGACCTTCAACAGCATCTTTATTACCGACTGGAAAAATTACGCCGCGATTAACGAAATCTACGCCGAGTTTTTTCCGGGTGATAAACCGGCGCGATTCTGCATTCAGTGCGGACTGGTAAAACCTGACGCGCTGGTGGAAATCGCCACAATTGCGCATATCGCCAAGTGA", - "dna_sequence_length": 387, - "functions": [ - "putative aminoacrylate deaminase, reactive intermediate detoxification", - "weak enamine/imine deaminase activity" - ], - "id": "CDS_993", - "location": [ - [ - "NC_000913", - 1072159, - "-", - 387 - ] - ], - "md5": "d27b6edee2231c7b210bdc82b735bf9c", - "parent_gene": "", - "protein_md5": "f32afda8bbffe3f14c1dd9b290121171", - "protein_translation": "MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK", - "protein_translation_length": 128, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1002" - ], - [ - "gene_synonym", - "GeneID:945699" - ], - [ - "gene_synonym", - "NP_415531.2" - ], - [ - "gene_synonym", - "rutB" - ], - [ - "gene_synonym", - "GI:90111203" - ], - [ - "gene_synonym", - "EcoGene:EG13858" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75897" - ], - [ - "gene_synonym", - "JW5139" - ], - [ - "gene_synonym", - "ASAP:ABE-0003414" - ], - [ - "gene_synonym", - "ycdL" - ], - [ - "gene_synonym", - "b1011" - ] - ], - "dna_sequence": "ATGACGACCTTAACCGCTCGACCGGAAGCCATTACCTTCGATCCGCAGCAAAGTGCGCTGATCGTGGTGGATATGCAAAACGCTTATGCCACGCCAGGCGGCTACTTAGATCTCGCCGGGTTTGATGTCTCAACCACTCGCCCGGTCATTGCCAACATTCAAACCGCCGTGACCGCAGCGCGAGCGGCAGGGATGCTGATCATCTGGTTTCAAAATGGCTGGGATGAACAGTATGTCGAGGCTGGCGGACCCGGCTCACCGAATTTTCATAAATCGAACGCCCTGAAAACCATGCGTAAGCAGCCGCAGCTGCAGGGGAAATTGCTGGCGAAAGGCTCCTGGGATTATCAACTGGTGGATGAACTGGTGCCGCAGCCTGGCGATATTGTGCTGCCGAAGCCGCGCTACAGCGGTTTCTTCAATACGCCGCTGGACAGCATTTTGCGCAGCCGCGGAATACGCCATCTGGTTTTCACCGGCATCGCTACCAACGTCTGCGTCGAATCGACGCTACGCGACGGCTTTTTTCTGGAGTATTTCGGCGTGGTGCTTGAAGACGCAACTCACCAGGCGGGGCCGAAATTTGCGCAGAAAGCCGCGTTGTTCAATATCGAAACCTTTTTTGGCTGGGTCAGCGACGTCGAAACATTCTGCGACGCGCTTTCTCCCACGTCCTTTGCTCATATCGCTTAA", - "dna_sequence_length": 693, - "functions": [ - "ureidoacrylate amidohydrolase" - ], - "id": "CDS_994", - "location": [ - [ - "NC_000913", - 1072863, - "-", - 693 - ] - ], - "md5": "cae5c8ea91101729db448eccf3275f66", - "parent_gene": "", - "protein_md5": "c21718f4952f1e2734919a6f5f970123", - "protein_translation": "MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPKFAQKAALFNIETFFGWVSDVETFCDALSPTSFAHIA", - "protein_translation_length": 230, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1003" - ], - [ - "gene_synonym", - "JW0997" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75898" - ], - [ - "gene_synonym", - "NP_415532.3" - ], - [ - "gene_synonym", - "GeneID:945643" - ], - [ - "gene_synonym", - "ycdM" - ], - [ - "gene_synonym", - "rutA" - ], - [ - "gene_synonym", - "GI:49176071" - ], - [ - "gene_synonym", - "EcoGene:EG13859" - ], - [ - "gene_synonym", - "ASAP:ABE-0003416" - ], - [ - "gene_synonym", - "b1012" - ] - ], - "dna_sequence": "ATGCAGGATGCAGCGCCCCGTCTGACTTTCACTTTACGAGACGAAGAGAGGTTGATGATGAAAATTGGCGTATTCGTACCTATTGGCAACAACGGCTGGCTCATTTCGACCCACGCGCCGCAGTACATGCCGACCTTTGAACTGAATAAAGCCATTGTGCAAAAAGCGGAGCACTACCATTTCGATTTCGCCCTGTCGATGATCAAACTGCGTGGCTTTGGCGGCAAAACTGAGTTCTGGGATCACAACCTTGAGTCGTTCACCTTGATGGCGGGGCTGGCGGCCGTGACCTCGCGCATTCAGATTTACGCCACTGCTGCCACCTTAACGTTACCTCCGGCAATCGTCGCCCGTATGGCCGCAACCATCGACTCCATCTCTGGCGGGCGTTTTGGCGTCAACCTCGTGACTGGCTGGCAAAAGCCCGAGTATGAGCAGATGGGTATCTGGCCTGGCGATGACTATTTCTCCCGTCGTTACGACTATCTCACCGAATATGTTCAGGTGCTGCGCGACCTGTGGGGCACGGGGAAAAGCGATTTTAAAGGCGATTTTTTCACCATGAATGATTGTCGCGTGAGTCCGCAACCGAGTGTCCCCATGAAAGTGATCTGCGCCGGGCAAAGCGACGCTGGCATGGCGTTCTCCGCCCGGTATGCCGATTTCAACTTCTGTTTCGGCAAAGGCGTAAATACACCCACGGCTTTCGCCCCGACCGCTGCGCGGATGAAACAGGCCGCAGAGCAAACCGGACGCGACGTTGGCTCTTATGTGTTGTTTATGGTGATTGCCGATGAAACCGACGATGCCGCTCGCGCCAAATGGGAACACTACAAAGCGGGCGCGGATGAAGAGGCGTTAAGCTGGCTAACCGAACAAAGTCAGAAAGATACCCGCTCCGGTACTGACACCAACGTTCGTCAGATGGCCGATCCCACTTCGGCGGTAAACATCAATATGGGGACGTTAGTCGGTTCTTACGCCAGTGTCGCGCGCATGTTAGATGAAGTCGCAAGCGTGCCTGGTGCCGAAGGCGTGCTGTTAACCTTCGACGATTTTCTGTCGGGAATCGAAACCTTCGGCGAGCGCATTCAACCACTGATGCAATGCCGCGCCCATCTACCTGCGCTGACTCAGGAGGTGGCATGA", 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"GI:16128979" - ], - [ - "gene_synonym", - "JW0998" - ], - [ - "gene_synonym", - "EcoGene:EG12301" - ], - [ - "gene_synonym", - "ycdC" - ], - [ - "gene_synonym", - "NP_415533.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003422" - ], - [ - "gene_synonym", - "b1013" - ] - ], - "dna_sequence": "ATGACGCAAGGCGCAGTGAAAACAACGGGTAAACGTTCGCGCGCAGTAAGCGCGAAGAAAAAAGCGATTCTTAGCGCAGCACTGGACACTTTTTCACAATTCGGTTTTCACGGCACAAGGCTGGAGCAGATCGCAGAGTTGGCGGGTGTTTCAAAAACCAATCTGCTGTATTACTTTCCGTCAAAAGAGGCGCTGTATATTGCCGTGCTGCGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGACAGGCGCGACGTTGCGCGATGAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTGAGGGGATTCGACCACGTTAA", - "dna_sequence_length": 639, - "functions": [ - "rut operon transcriptional repressor for" - ], - "id": "CDS_996", - "location": [ - [ - "NC_000913", - 1074242, - "+", - 639 - ] - ], - "md5": "c680aead575af4382fc93e1cff891bbe", - "parent_gene": "", - "protein_md5": "eb9b9a05110a11a2cf9ed5fbe3e01cdb", - "protein_translation": "MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR", - "protein_translation_length": 212, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10801" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09546" - ], - [ - "gene_synonym", - "ECK1005" - ], - [ - "gene_synonym", - "GeneID:945600" - ], - [ - "gene_synonym", - "JW0999" - ], - [ - "gene_synonym", - "poaA" - ], - [ - "gene_synonym", - "NP_415534.1" - ], - [ - "gene_synonym", - "putA" - ], - [ - "gene_synonym", - "putC" - ], - [ - "gene_synonym", - "GI:16128980" - ], - [ - "gene_synonym", - "b1014" - ], - [ - "gene_synonym", - "ASAP:ABE-0003424" - ] - ], - "dna_sequence": "ATGGGAACCACCACCATGGGGGTTAAGCTGGACGACGCGACGCGTGAGCGTATTAAGTCTGCCGCGACACGTATCGATCGCACACCACACTGGTTAATTAAGCAGGCGATTTTTTCTTATCTCGAACAACTGGAAAACAGCGATACTCTGCCGGAGCTACCTGCGCTGCTTTCTGGCGCGGCCAATGAGAGCGATGAAGCACCGACTCCGGCAGAGGAACCACACCAGCCATTCCTCGACTTTGCCGAGCAAATATTGCCCCAGTCGGTTTCCCGCGCCGCGATCACCGCGGCCTATCGCCGCCCGGAAACCGAAGCGGTTTCTATGCTGCTGGAACAAGCCCGCCTGCCGCAGCCAGTTGCTGAACAGGCGCACAAACTGGCGTATCAGCTGGCCGATAAACTGCGTAATCAAAAAAATGCCAGTGGTCGCGCAGGTATGGTCCAGGGGTTATTGCAGGAGTTTTCGCTGTCATCGCAGGAAGGCGTGGCGCTGATGTGTCTGGCGGAAGCGTTGTTGCGTATTCCCGACAAAGCCACCCGCGACGCGTTAATTCGCGACAAAATCAGCAACGGTAACTGGCAGTCACACATTGGTCGTAGCCCGTCACTGTTTGTTAATGCCGCCACCTGGGGGCTGCTGTTTACTGGCAAACTGGTTTCCACCCATAACGAAGCCAGCCTCTCCCGCTCGCTGAACCGCATTATCGGTAAAAGCGGTGAACCGCTGATCCGCAAAGGTGTGGATATGGCGATGCGCCTGATGGGTGAGCAGTTCGTCACTGGCGAAACCATCGCGGAAGCGTTAGCCAATGCCCGCAAGCTGGAAGAGAAAGGTTTCCGTTACTCTTACGATATGCTGGGCGAAGCCGCGCTGACCGCCGCAGATGCACAGGCGTATATGGTTTCCTATCAGCAGGCGATTCACGCCATCGGTAAAGCGTCTAACGGTCGTGGCATCTATGAAGGGCCGGGCATTTCAATCAAACTGTCGGCGCTGCATCCGCGTTATAGCCGCGCCCAGTATGACCGGGTAATGGAAGAGCTTTACCCGCGTCTGAAATCACTCACCCTGCTGGCGCGTCAGTACGATATTGGTATCAACATTGACGCCGAAGAGTCCGATCGCCTGGAGATCTCCCTCGATCTGCTGGAAAAACTCTGTTTCGAGCCGGAACTGGCAGGCTGGAACGGCATCGGTTTTGTTATTCAGGCTTATCAAAAACGCTGCCCGTTGGTGATCGATTACCTGATTGATCTCGCCACCCGCAGCCGTCGCCGTCTGATGATTCGCCTGGTGAAAGGCGCGTACTGGGATAGTGAAATTAAGCGTGCGCAGATGGACGGCCTTGAAGGTTATCCGGTTTATACCCGCAAGGTGTATACCGACGTTTCTTATCTCGCCTGTGCGAAAAAGCTGCTGGCGGTGCCGAATCTAATCTACCCGCAGTTCGCGACGCACAACGCCCATACGCTGGCGGCGATTTATCAACTGGCGGGGCAGAACTACTACCCGGGTCAGTACGAGTTCCAGTGCCTGCATGGTATGGGCGAGCCACTGTATGAGCAGGTCACCGGGAAAGTTGCCGACGGCAAACTTAACCGTCCGTGTCGTATTTATGCTCCGGTTGGCACACATGAAACGCTGTTGGCGTATCTGGTGCGTCGCCTGCTGGAAAACGGTGCTAACACCTCGTTTGTTAACCGTATTGCCGACACCTCTTTGCCACTGGATGAACTGGTCGCCGATCCGGTCACTGCTGTAGAAAAACTGGCGCAACAGGAAGGGCAAACTGGATTACCGCATCCGAAAATTCCCCTGCCGCGCGATCTTTACGGTCACGGGCGCGACAACTCGGCAGGGCTGGATCTCGCTAACGAACACCGCCTGGCCTCGCTCTCCTCTGCCCTGCTCAATAGTGCACTGCAAAAATGGCAGGCCTTGCCAATGCTGGAACAACCGGTAGCGGCAGGTGAGATGTCGCCCGTTATTAACCCTGCGGAACCGAAAGATATTGTGGGCTATGTGCGTGAAGCCACGCCGCGTGAAGTAGAACAGGCGCTGGAAAGTGCGGTTAATAACGCGCCAATCTGGTTTGCCACGCCTCCGGCTGAACGCGCAGCGATTTTGCACCGCGCTGCCGTGCTGATGGAAAGCCAGATGCAGCAACTGATTGGTATTCTGGTGCGTGAGGCCGGAAAAACCTTCAGTAACGCCATTGCCGAAGTGCGCGAAGCGGTCGATTTTCTCCACTACTACGCCGGACAGGTGCGGGATGATTTCGCTAACGAAACCCACCGTCCATTAGGGCCTGTGGTGTGTATCAGTCCGTGGAACTTCCCGCTGGCTATTTTCACCGGGCAGATCGCCGCCGCACTGGCGGCAGGTAACAGCGTGCTGGCAAAACCGGCAGAACAAACGCCGCTGATTGCCGCGCAAGGGATCGCCATTTTGCTGGAAGCGGGTGTACCGCCAGGCGTGGTGCAATTGCTGCCAGGTCGGGGTGAAACCGTGGGCGCGCAACTGACGGGTGATGATCGCGTGCGCGGGGTGATGTTTACCGGTTCAACCGAAGTCGCTACGTTACTGCAGCGCAATATCGCCAGCCGCCTGGACGCTCAGGGTCGCCCTATTCCGCTCATCGCTGAAACCGGCGGCATGAACGCGATGATTGTCGATTCTTCAGCACTGACCGAACAGGTCGTCGTGGATGTACTGGCCTCGGCGTTCGACAGTGCGGGTCAGCGTTGTTCGGCGCTGCGCGTGCTGTGCCTGCAAGATGAGATTGCCGACCACACGTTGAAAATGCTGCGCGGCGCAATGGCCGAATGCCGGATGGGTAATCCGGGTCGCCTGACCACCGATATCGGTCCAGTGATTGATAGCGAAGCGAAAGCCAATATTGAGCGCCATATTCAGACCATGCGTAGCAAAGGCCGTCCGGTGTTCCAGGCGGTGCGGGAAAACAGCGAAGATGCCCGTGAATGGCAAAGCGGCACCTTTGTCGCCCCGACGCTGATCGAACTGGATGACTTTGCCGAATTGCAAAAAGAGGTCTTTGGTCCGGTGCTGCATGTGGTGCGTTACAACCGTAACCAGCTACCAGAGCTGATCGAGCAGATTAACGCTTCCGGTTATGGTCTGACGCTTGGCGTCCATACGCGCATTGATGAAACCATCGCCCAGGTCACTGGCTCGGCCCATGTTGGTAACCTGTATGTTAACCGTAATATGGTGGGCGCAGTGGTTGGTGTGCAGCCGTTCGGCGGCGAAGGGTTGTCCGGTACCGGGCCGAAAGCAGGCGGTCCGCTCTATCTCTACCGTCTGCTGGCGAATCGCCCGGAAAGTGCGCTGGCAGTGACGCTCGCGCGTCAGGATGCAAAGTATCCGGTCGATGCGCAGTTGAAAGCCGCATTGACTCAGCCGCTAAATGCACTGCGGGAATGGGCAGCAAATCGTCCAGAATTGCAGGCGTTATGTACGCAATATGGCGAGCTGGCGCAGGCAGGAACACAACGATTGCTGCCGGGGCCGACGGGTGAACGCAACACCTGGACGCTGCTGCCGCGTGAGCGCGTGTTGTGTATTGCCGATGATGAGCAGGATGCGCTGACTCAGCTCGCCGCCGTGCTGGCGGTGGGCAGCCAGGTACTGTGGCCGGATGACGCGCTGCATCGTCAGTTAGTGAAGGCATTGCCATCGGCAGTCAGCGAACGTATTCAACTGGCGAAAGCGGAAAATATAACCGCTCAACCGTTTGATGCGGTGATCTTCCACGGTGATTCGGATCAGCTTCGCGCATTGTGTGAAGCAGTTGCCGCGCGGGATGGCACAATTGTTTCGGTGCAGGGTTTTGCCCGTGGCGAAAGCAATATCCTTCTGGAACGGCTGTATATCGAGCGTTCGCTGAGTGTGAATACCGCTGCCGCTGGCGGTAACGCCAGCTTAATGACTATAGGTTAA", 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"MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEESDRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGYVREATPREVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGRGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAKYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGTIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG", - "protein_translation_length": 1320, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "putC" - ], - [ - "gene_synonym", - "GeneID:945602" - ], - [ - "gene_synonym", - "putP" - ], - [ - "gene_synonym", - "EcoGene:EG10802" - ], - [ - "gene_synonym", - "GI:16128981" - ], - [ - "gene_synonym", - "NP_415535.1" - ], - [ - "gene_synonym", - "JW1001" - ], - [ - "gene_synonym", - "b1015" - ], - [ - "gene_synonym", - "ASAP:ABE-0003433" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07117" - ], - [ - "gene_synonym", - "ECK1006" - ] - ], - "dna_sequence": "ATGGCTATTAGCACACCGATGTTGGTGACATTTTGTGTCTATATCTTTGGCATGATATTGATTGGGTTTATCGCCTGGCGATCAACGAAAAACTTTGACGACTATATTCTGGGCGGTCGTAGTCTTGGGCCATTCGTGACGGCATTATCGGCGGGTGCGTCGGATATGAGCGGCTGGCTGTTAATGGGGTTGCCGGGCGCTGTTTTTCTTTCCGGGATTTCCGAAAGCTGGATCGCCATTGGCCTGACATTAGGCGCGTGGATTAACTGGAAGCTGGTGGCCGGGCGGTTGCGTGTGCATACCGAATACAACAATAACGCCTTAACACTGCCGGATTATTTCACCGGGCGCTTTGAAGATAAAAGCCGCATTTTGCGCATTATCTCTGCGCTGGTTATTTTGCTGTTCTTCACCATTTATTGCGCTTCGGGCATTGTGGCAGGCGCGCGTCTGTTTGAAAGTACCTTTGGCATGAGCTACGAAACGGCTCTGTGGGCGGGCGCTGCGGCGACGATCCTTTACACCTTTATTGGCGGTTTCCTCGCGGTGAGCTGGACTGACACTGTACAGGCCAGCCTGATGATTTTTGCCCTGATCCTGACGCCGGTTATCGTCATTATCAGTGTCGGTGGCTTTGGTGACTCGCTGGAAGTGATCAAACAAAAGAGCATCGAAAACGTTGATATGCTCAAAGGTCTGAACTTTGTTGCCATTATCTCACTGATGGGTTGGGGGCTGGGTTACTTCGGGCAGCCGCACATTCTGGCGCGTTTTATGGCGGCGGATTCTCACCACAGCATTGTCCATGCGCGTCGTATTAGTATGACCTGGATGATCCTCTGCCTGGCAGGGGCGGTGGCTGTCGGCTTCTTTGGGATTGCTTACTTTAACGATCATCCGGCGTTGGCTGGTGCGGTAAATCAGAACGCCGAGCGTGTGTTTATCGAACTGGCGCAAATTCTGTTTAACCCGTGGATTGCCGGGATTCTGCTGTCGGCAATTCTGGCGGCGGTAATGTCAACCTTAAGTTGCCAGCTGCTGGTGTGCTCCAGTGCGATTACCGAAGATTTGTACAAAGCGTTTCTGCGTAAACATGCCAGCCAGAAAGAGCTGGTGTGGGTAGGGCGTGTGATGGTGCTGGTGGTGGCGCTGGTGGCGATTGCGCTGGCGGCAAACCCGGAAAACCGCGTGCTGGGCTTAGTGAGCTACGCGTGGGCAGGCTTTGGCGCGGCGTTTGGTCCAGTGGTGCTGTTCTCGGTGATGTGGTCACGCATGACGCGTAACGGTGCGCTGGCGGGGATGATCATCGGTGCGCTGACGGTTATCGTCTGGAAACAGTTCGGCTGGCTGGGACTGTACGAAATTATTCCGGGCTTTATCTTCGGCAGTATTGGGATTGTAGTGTTTAGTTTGCTGGGTAAAGCGCCGTCAGCGGCGATGCAAAAACGCTTTGCCGAGGCCGATGCGCACTATCATTCGGCTCCGCCGTCACGGTTGCAGGAAAGCTAA", 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"gene_synonym", - "ASAP:ABE-0285091" - ], - [ - "gene_synonym", - "b4490" - ], - [ - "gene_synonym", - "efeU" - ], - [ - "gene_synonym", - "ASAP:ABE-0003441" - ], - [ - "gene_synonym", - "ASAP:ABE-0003443" - ], - [ - "gene_synonym", - "GeneID:948956" - ], - [ - "gene_synonym", - "JW5141" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75901" - ], - [ - "gene_synonym", - "JW1002" - ], - [ - "gene_synonym", - "ycdN" - ] - ], - "dna_sequence": "ATGTTTGTTCCGTTTCTCATTATGTTGCGCGAAGGACTTGAAGCCGCGCTGATTGTCAGTTTGATTGCCAGCTATCTTAAGCGTACCCAGCGAGGCCGATGGATTTGTGTGATGTGGATTGGCGTGTTGCTTGCCGCTGCGTTGTGCCTGGGCTTGGGTATCTTCATTAACGAAACCACCGGCGAATTTCCGCAAAAAGAACAGGAACTGTTTGAAGGTATCGTGGCGGTGATCGCCGTGGTGATCCTTACCTGGATGGTTTTCTGGATGCGCAAAGTGTCGCGCAACGTCAAAGTGCAACTGGAACAGGCAGTCGATAGCGCATTGCAGCGTGGAAATCATCATGGCTGGGCGCTGGTGATGATGGTCTTTTTTGCCGTTGCAAGGGAAGGGCTGGAGTCGGTCTTTTTCCTGCTGGCGGCATTTCAACAAGATGTCGGGATCTGGCCGCCGCTGGGTGCAATGCTCGGTCTTGCTACTGCCGTGGTGCTAGGCTTCCTGCTCTACTGGGGCGGTATTCGCCTCAATCTTGGTGCATTTTTTAAATGGACCAGCCTGTTTATTCTCTTCGTCGCCGCAGGGCTGGCAGCTGGTGCCATTCGCGCATTTCATGAAGCCGGATTGTGGAACCACTTTCAGGAAATCGCCTTCGATATGAGTGCGGTGCTCTCAACTCACTCGCTGTTTGGCACGCTGATGGAAGGGATTTTTGGCTATCAGGAAGCGCCGAGCGTCAGCGAAGTCGCCGTCTGGTTTATTTATCTCATCCCGGCGCTGGTGGCATTTGCTCTGCCACCACGCGCAGGGGCGACAGCGTCTCGCTCCGCGTAA", - "dna_sequence_length": 831, - "id": "CDS_999", - "location": [ - [ - "NC_000913", - 1081356, - "+", - 105 - ], - [ - "NC_000913", - 1081460, - "+", - 726 - ] - ], - "md5": "df478d95e4564dafb29e24e8ba4786ab", - "parent_gene": "", - "protein_md5": "6a0030161be4653f637cf58fd452c328", - "protein_translation": "MFVPFLIMLREGLEAALIVSLIASYLKRTQRGRWICVMWIGVLLAAALCLGLGIFINETTGEFPQKEQELFEGIVAVIAVVILTWMVFWMRKVSRNVKVQLEQAVDSALQRGNHHGWALVMMVFFAVAREGLESVFFLLAAFQQDVGIWPPLGAMLGLATAVVLGFLLYWGGIRLNLGAFFKWTSLFILFVAAGLAAGAIRAFHEAGLWNHFQEIAFDMSAVLSTHSLFGTLMEGIFGYQEAPSVSEVAVWFIYLIPALVAFALPPRAGATASRSA", - "protein_translation_length": 276, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945603" - ], - [ - "gene_synonym", - "NP_415537.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003448" - ], - [ - "gene_synonym", - "EcoGene:EG13861" - ], - [ - "gene_synonym", - "ECK1008" - ], - [ - "gene_synonym", - "efeO" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB24" - ], - [ - "gene_synonym", - "GI:16128982" - ], - [ - "gene_synonym", - "b1018" - ], - [ - "gene_synonym", - "JW1003" - ], - [ - "gene_synonym", - "ycdO" - ] - ], - "dna_sequence": "ATGACCATTAACTTCCGCCGTAACGCATTGCAGTTGAGCGTGGCTGCGCTGTTTTCTTCTGCTTTTATGGCTAACGCCGCTGATGTGCCGCAGGTCAAAGTGACCGTGACGGATAAGCAGTGCGAACCGATGACCATTACGGTTAACGCCGGGAAAACACAGTTCATTATTCAGAACCACAGCCAGAAGGCGCTGGAGTGGGAGATCCTCAAAGGCGTGATGGTGGTGGAAGAGCGGGAAAATATCGCCCCTGGCTTTAGCCAGAAAATGACGGCGAATTTACAGCCTGGCGAATACGATATGACCTGCGGTCTGCTGACTAACCCGAAAGGGAAGTTGATCGTCAAAGGTGAGGCAACGGCGGATGCGGCGCAAAGTGATGCGCTGTTAAGTCTTGGTGGTGCAATTACTGCATATAAAGCGTATGTCATGGCGGAAACCACGCAGCTGGTGACCGACACCAAAGCCTTTACCGACGCGATTAAAGCAGGCGATATCGAAAAAGCGAAAGCACTGTATGCACCGACGCGCCAGCACTATGAGCGTATTGAACCGATTGCTGAACTGTTCTCCGATCTGGATGGCAGCATTGACGCCCGTGAAGATGATTACGAGCAAAAAGCCGCCGACCCAAAATTCACTGGTTTCCACCGTCTGGAAAAAGCATTGTTTGGCGACAACACCACCAAAGGGATGGATCAGTACGCTGAGCAGCTTTATACCGATGTGGTCGATTTGCAAAAACGCATCAGTGAACTGGCTTTCCCACCTTCAAAAGTGGTCGGCGGCGCAGCCGGACTGATTGAGGAAGTGGCAGCCAGCAAAATTAGCGGTGAAGAAGATCGCTACAGCCACACCGATCTGTGGGATTTCCAGGCTAACGTTGAAGGCTCGCAGAAAATTGTCGATTTGCTGCGTCCACAACTGCAAAAAGCCAACCCGGAACTGCTGGCAAAAGTCGATGCCAACTTTAAAAAGGTCGATACCATTCTGGCGAAATACCGTACTAAAGACGGTTTTGAAACCTACGACAAATTGACCGATGCCGACCGGAATGCACTGAAAGGACCGATTACTGCGCTGGCGGAAGATCTGGCGCAACTTCGCGGTGTGCTGGGACTGGATTAA", 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[ - "gene_synonym", - "ycdB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31545" - ], - [ - "gene_synonym", - "b1019" - ], - [ - "gene_synonym", - "GI:16128983" - ], - [ - "gene_synonym", - "JW1004" - ], - [ - "gene_synonym", - "GeneID:946500" - ] - ], - "dna_sequence": "ATGCAGTATAAAGATGAAAACGGCGTGAATGAACCGTCACGCCGACGTTTACTGAAAGTGATAGGTGCACTGGCGCTGGCGGGAAGTTGTCCGGTCGCTCATGCACAAAAAACGCAAAGTGCGCCGGGTACGCTTTCACCGGATGCTCGCAATGAGAAACAGCCGTTTTATGGTGAGCATCAGGCAGGGATCCTGACGCCACAACAGGCCGCAATGATGCTGGTGGCGTTTGATGTGCTTGCCAGCGATAAAGCCGATCTTGAGCGGTTGTTTCGCTTGTTGACTCAGCGTTTTGCTTTTCTGACTCAGGGCGGAGCAGCACCAGAAACGCCAAATCCGCGCCTGCCACCACTCGATTCCGGCATTCTTGGCGGCTACATTGCGCCCGATAATCTCACCATCACGTTATCGGTGGGTCACTCATTGTTTGATGAGCGCTTTGGCCTTGCGCCACAGATGCCAAAAAAGCTGCAGAAGATGACGCGTTTCCCCAACGACTCGCTGGATGCGGCGTTATGTCATGGTGATGTGTTGCTACAGATTTGCGCCAACACCCAGGACACGGTTATCCATGCGCTGCGCGATATCATCAAACACACGCCGGATTTGCTCAGTGTGCGCTGGAAGCGGGAAGGGTTTATTTCCGATCACGCGGCGCGTAGTAAAGGCAAAGAGACGCCGATTAATTTGCTGGGTTTCAAAGACGGCACTGCCAATCCCGATAGCCAGAATGATAAGTTGATGCAAAAAGTGGTGTGGGTAACGGCAGATCAGCAGGAGCCTGCGTGGACAATCGGTGGCAGCTATCAGGCAGTACGCTTGATTCAGTTTCGAGTGGAATTTTGGGACAGAACGCCGCTGAAAGAACAGCAGACGATTTTTGGCCGTGATAAGCAAACCGGTGCGCCGCTGGGAATGCAGCATGAGCATGATGTGCCTGATTACGCCAGCGACCCGGAAGGGAAGGTGATCGCGCTGGACAGCCATATCCGGCTGGCGAATCCCCGCACGGCGGAGAGTGAGTCCAGCCTGATGCTGCGTCGTGGCTACAGTTATTCACTGGGCGTCACCAACTCCGGGCAACTGGATATGGGGTTGCTGTTTGTCTGCTACCAACACGATCTGGAAAAAGGCTTCCTGACAGTACAAAAAAGGCTCAATGGCGAAGCGCTGGAGGAATACGTTAAACCTATCGGCGGCGGTTATTTTTTTGCGCTGCCGGGGGTGAAGGACGCGAACGATTATTTCGGAAGCGCGTTATTGCGGGTTTAA", - "dna_sequence_length": 1272, - "functions": [ - "deferrrochelatase, periplasmic" - ], - "id": "CDS_1001", - "location": [ - [ - "NC_000913", - 1083376, - "+", - 1272 - ] - ], - "md5": "a6365b148242dc562dcdf582920fafda", - "parent_gene": "", - "protein_md5": "1b132ebafe918ddb07ad91bf691ba8ce", - "protein_translation": "MQYKDENGVNEPSRRRLLKVIGALALAGSCPVAHAQKTQSAPGTLSPDARNEKQPFYGEHQAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLTQGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKMTRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANPDSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPEGKVIALDSHIRLANPRTAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGGGYFFALPGVKDANDYFGSALLRV", - "protein_translation_length": 423, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1010" - ], - [ - "gene_synonym", - "NP_415539.1" - ], - [ - "gene_synonym", - "GeneID:948010" - ], - [ - "gene_synonym", - "psiH" - ], - [ - "gene_synonym", - "ASAP:ABE-0003458" - ], - [ - "gene_synonym", - "EcoGene:EG11734" - ], - [ - "gene_synonym", - "GI:16128984" - ], - [ - "gene_synonym", - "b1020" - ], - [ - "gene_synonym", - "phoH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9K1" - ], - [ - "gene_synonym", - "JW1005" - ] - ], - "dna_sequence": "ATGGTAACGTCCTGTACTGGACATGTTTTAGATAATCAACGCGCCACCACTCGCGGAGTTTTCTCCTCCGGTAGTCATCTCGTCACTTTGCATTTTCAACCTCATCCTTTCTTTTCATGTGTTACCGACGCCGTAAACGGTGCGCGTAGCCGTTTTTCGGCATTTTATCCAAAAGCAAACTATGGCTTACAAGGAAGCCAACCCTCTGATGTTCGTGCGCATAATCGCGCTGCCAACGGCGCGTGTGATGAATACAAACAACTCAAGGTGCTCTCCATGGGAAGACAAAAAGCAGTGATCAAAGCTCGTCGCGAGGCAAAACGTGTGCTGAGACGGGATTCGCGCAGCCATAAGCAGCGTGAAGAAGAATCGGTCACCTCGCTTGTGCAGATGGGCGGCGTAGAAGCCATTGGTATGGCCCGCGACAGTCGCGATACTTCGCCCATCCTCGCGCGAAATGAAGCGCAATTGCACTATCTGAAGGCTATTGAGAGTAAGCAGCTGATATTCGCCACGGGCGAAGCCGGGTGCGGAAAAACCTGGATCAGCGCAGCAAAAGCGGCAGAGGCCCTGATACATAAGGATGTCGACAGGATTATCGTCACCCGTCCAGTTCTGCAAGCCGATGAAGATCTTGGCTTCTTACCTGGAGATATCGCAGAAAAGTTTGCTCCCTATTTTCGCCCGGTCTACGACGTGCTGGTCCGGCGCTTAGGGGCTTCCTTTATGCAGTACTGCCTGCGACCGGAAATAGGGAAGGTGGAAATTGCGCCGTTCGCCTATATGCGTGGACGTACCTTTGAAAATGCAGTCGTCATTCTTGACGAGGCGCAGAATGTGACTGCCGCGCAAATGAAAATGTTTTTAACCCGCCTCGGGGAGAACGTGACGGTTATCGTCAACGGTGATATCACGCAATGCGATTTGCCTCGCGGCGTGTGCTCCGGATTAAGTGACGCGCTGGAACGTTTCGAAGAAGATGAAATGGTTGGGATCGTCCGGTTCGGTAAAGAGGACTGCGTACGTTCGGCACTTTGCCAACGTACGCTGCATGCCTACAGTTAA", - "dna_sequence_length": 1065, - "functions": [ - "ATP-binding protein", - "putative PhoH family P-loop ATPase" - ], - "id": "CDS_1002", - "location": [ - [ - "NC_000913", - 1084992, - "+", - 1065 - ] - ], - "md5": "fbf3460e0aa9c103d6169d3233e6bcbc", - "parent_gene": "", - "protein_md5": "bfbd420a3b0d77600aa5fd8fa6876f2d", - "protein_translation": "MVTSCTGHVLDNQRATTRGVFSSGSHLVTLHFQPHPFFSCVTDAVNGARSRFSAFYPKANYGLQGSQPSDVRAHNRAANGACDEYKQLKVLSMGRQKAVIKARREAKRVLRRDSRSHKQREEESVTSLVQMGGVEAIGMARDSRDTSPILARNEAQLHYLKAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDLGFLPGDIAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVVILDEAQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLPRGVCSGLSDALERFEEDEMVGIVRFGKEDCVRSALCQRTLHAYS", - "protein_translation_length": 354, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ycdP" - ], - [ - "gene_synonym", - "ECK1011" - ], - [ - "gene_synonym", - "EcoGene:EG13862" - ], - [ - "gene_synonym", - "ASAP:ABE-0003460" - ], - [ - "gene_synonym", - "GeneID:947503" - ], - [ - "gene_synonym", - "pgaD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69432" - ], - [ - "gene_synonym", - "GI:16128985" - ], - [ - "gene_synonym", - "b1021" - ], - [ - "gene_synonym", - "hmsS" - ], - [ - "gene_synonym", - "NP_415540.1" - ], - [ - "gene_synonym", - "JW1006" - ] - ], - "dna_sequence": "ATGAACAATTTAATTATTACGACCCGACAATCACCAGTACGTTTACTGGTTGATTATGTTGCCACAACCATCTTGTGGACATTATTTGCGTTGTTCATATTCTTATTCGCCATGGATCTGCTGACGGGTTATTACTGGCAAAGCGAGGCCAGAAGCCGACTTCAGTTCTATTTTTTGCTGGCAGTGGCGAATGCCGTCGTGTTAATTGTCTGGGCGCTGTACAATAAGCTGCGTTTTCAAAAACAGCAGCATCATGCAGCCTACCAATATACGCCGCAAGAATATGCAGAGAGCTTAGCAATACCTGATGAGCTCTATCAGCAACTACAAAAAAGCCACAGGATGAGCGTACACTTCACCAGCCAGGGGCAAATAAAAATGGTTGTTTCAGAAAAAGCGCTAGTCCGGGCATAA", - "dna_sequence_length": 414, - "functions": [ - "biofilm PGA synthase PgaCD, regulatory subunit", - "c-di-GMP-stimulated activity and dimerization" - ], - "id": "CDS_1003", - "location": [ - [ - "NC_000913", - 1086519, - "-", - 414 - ] - ], - "md5": "dc0f72d4bcffb39907d61383b78d3454", - "parent_gene": "", - "protein_md5": "c3167972b4a42808c1f27d2cad0ddb1d", - "protein_translation": "MNNLIITTRQSPVRLLVDYVATTILWTLFALFIFLFAMDLLTGYYWQSEARSRLQFYFLLAVANAVVLIVWALYNKLRFQKQQHHAAYQYTPQEYAESLAIPDELYQQLQKSHRMSVHFTSQGQIKMVVSEKALVRA", - "protein_translation_length": 137, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ycdQ" - ], - [ - "gene_synonym", - "ECK1012" - ], - [ - "gene_synonym", - "ASAP:ABE-0003464" - ], - [ - "gene_synonym", - "EcoGene:EG13863" - ], - [ - "gene_synonym", - "NP_415541.1" - ], - [ - "gene_synonym", - "pgaC" - ], - [ - "gene_synonym", - "GeneID:945606" - ], - [ - "gene_synonym", - "GI:16128986" - ], - [ - "gene_synonym", - "b1022" - ], - [ - "gene_synonym", - "hmsR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75905" - ], - [ - "gene_synonym", - "JW1007" - ] - ], - "dna_sequence": "ATGATTAATCGCATCGTATCGTTTTTTATATTATGTCTGGTGTTATGCATACCCCTATGCGTAGCGTACTTTCACTCTGGTGAACTGATGATGAGGTTCGTTTTCTTCTGGCCGTTTTTTATGTCCATTATGTGGATTGTTGGCGGCGTCTATTTCTGGGTCTATCGTGAACGCCACTGGCCGTGGGGAGAAAACGCACCAGCTCCCCAGTTGAAAGATAATCCGTCTATCTCCATTATCATTCCCTGTTTTAATGAGGAGAAAAACGTTGAGGAAACCATACACGCCGCTTTAGCACAGCGTTATGAGAACATTGAAGTTATTGCCGTAAATGACGGTTCAACAGATAAAACCCGTGCCATCCTGGATCGCATGGCTGCACAAATTCCCCATTTGCGGGTCATTCATCTGGCGCAAAACCAGGGGAAAGCCATTGCGCTTAAAACCGGAGCTGCCGCGGCGAAAAGTGAATATCTGGTGTGCATTGATGGCGATGCGTTATTAGACCGCGATGCGGCGGCATATATTGTGGAACCGATGTTGTACAACCCGCGTGTGGGTGCCGTAACCGGTAATCCTCGTATTCGAACACGTTCTACCCTGGTGGGTAAAATTCAGGTTGGCGAGTATTCCTCAATTATTGGTTTGATCAAGCGAACCCAGCGTATCTATGGAAACGTATTTACCGTTTCCGGTGTTATTGCCGCATTTCGTCGCAGCGCCCTGGCAGAAGTGGGTTACTGGAGTGACGATATGATCACCGAAGATATTGATATTAGCTGGAAGCTGCAGTTGAATCAGTGGACGATTTTTTACGAGCCACGGGCACTGTGCTGGATATTAATGCCTGAAACGTTAAAAGGGCTGTGGAAACAGCGCCTGCGCTGGGCTCAGGGCGGTGCAGAAGTATTCCTCAAAAATATGACAAGGTTGTGGCGCAAAGAAAACTTTCGAATGTGGCCGCTGTTTTTTGAATACTGCCTGACGACAATATGGGCCTTCACCTGCCTGGTCGGTTTCATTATTTACGCAGTCCAACTTGCCGGTGTACCGTTAAATATTGAATTGACACATATCGCTGCGACACATACTGCCGGAATATTATTGTGTACGTTATGTTTACTGCAATTTATTGTCAGCCTGATGATCGAGAATCGCTATGAGCATAATCTGACTTCATCGCTTTTCTGGATTATTTGGTTCCCGGTTATTTTCTGGATGCTGAGCCTGGCAACGACATTGGTATCATTTACACGAGTCATGTTGATGCCTAAAAAGCAACGCGCCCGTTGGGTAAGTCCCGATCGCGGGATTCTGAGAGGTTAA", - "dna_sequence_length": 1326, - "functions": [ - "biofilm PGA synthase PgaCD, catalytic subunit", - "poly-beta-1,6-N-acetyl-D-glucosamine synthase" - ], - "id": "CDS_1004", - "location": [ - [ - "NC_000913", - 1087846, - "-", - 1326 - ] - ], - "md5": "86f528f0fc0d96c75ddd82bedb4fa7a1", - "parent_gene": "", - "protein_md5": "904b57c2698f1a062f240a0717ad169d", - "protein_translation": "MINRIVSFFILCLVLCIPLCVAYFHSGELMMRFVFFWPFFMSIMWIVGGVYFWVYRERHWPWGENAPAPQLKDNPSISIIIPCFNEEKNVEETIHAALAQRYENIEVIAVNDGSTDKTRAILDRMAAQIPHLRVIHLAQNQGKAIALKTGAAAAKSEYLVCIDGDALLDRDAAAYIVEPMLYNPRVGAVTGNPRIRTRSTLVGKIQVGEYSSIIGLIKRTQRIYGNVFTVSGVIAAFRRSALAEVGYWSDDMITEDIDISWKLQLNQWTIFYEPRALCWILMPETLKGLWKQRLRWAQGGAEVFLKNMTRLWRKENFRMWPLFFEYCLTTIWAFTCLVGFIIYAVQLAGVPLNIELTHIAATHTAGILLCTLCLLQFIVSLMIENRYEHNLTSSLFWIIWFPVIFWMLSLATTLVSFTRVMLMPKKQRARWVSPDRGILRG", - "protein_translation_length": 441, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003467" - ], - [ - "gene_synonym", - "ycdR" - ], - [ - "gene_synonym", - "ECK1013" - ], - [ - "gene_synonym", - "GeneID:945604" - ], - [ - "gene_synonym", - "NP_415542.1" - ], - [ - "gene_synonym", - "EcoGene:EG13864" - ], - [ - "gene_synonym", - "pgaB" - ], - [ - "gene_synonym", - "b1023" - ], - [ - "gene_synonym", - "GI:16128987" - ], - [ - "gene_synonym", - "JW5142" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75906" - ] - ], - "dna_sequence": "ATGTTACGTAATGGAAATAAATATCTCCTGATGCTGGTGAGTATAATTATGCTCACCGCGTGCATTAGCCAGTCAAGAACATCATTTATACCGCCACAGGATCGCGAATCTTTACTCGCCGAGCAACCGTGGCCGCATAATGGTTTTGTAGCGATTTCATGGCATAACGTTGAAGACGAAGCTGCCGACCAGCGTTTTATGTCAGTGCGGACATCAGCACTGCGTGAACAATTTGCCTGGCTGCGCGAGAACGGTTATCAACCGGTCAGTATTGCTCAAATTCGTGAAGCACATCGAGGAGGAAAACCGCTACCGGAAAAAGCTGTAGTGCTGACTTTTGATGACGGCTACCAGAGTTTTTATACCCGCGTCTTCCCAATTCTTCAGGCCTTCCAGTGGCCTGCTGTATGGGCCCCCGTCGGCAGTTGGGTCGATACGCCAGCGGATAAACAAGTAAAATTTGGCGATGAGTTGGTCGATCGAGAATATTTTGCCACGTGGCAACAAGTGCGAGAAGTTGCGCGTTCCCGGCTCGTTGAGCTCGCTTCTCATACATGGAATTCTCACTACGGTATTCAGGCTAATGCCACCGGCAGCTTATTGCCTGTATATGTAAATCGTGCATATTTTACTGACCACGCACGGTATGAAACCGCAGCAGAATACCGGGAAAGAATTCGTCTGGATGCTGTAAAAATGACGGAATACCTGCGTACAAAGGTTGAGGTAAATCCACACGTTTTTGTTTGGCCTTATGGCGAAGCGAATGGCATAGCGATAGAGGAATTAAAAAAACTCGGTTATGACATGTTCTTCACCCTTGAATCAGGTTTGGCAAATGCGTCGCAATTGGATTCCATTCCGCGGGTATTAATCGCCAATAATCCCTCATTAAAAGAGTTTGCCCAGCAAATTATTACCGTACAGGAAAAATCACCACAACGGATAATGCATATCGATCTTGATTACGTTTATGACGAAAACCTCCAGCAAATGGATCGCAATATTGATGTGCTAATTCAGCGGGTGAAAGATATGCAAATATCAACCGTGTATTTGCAGGCATTTGCTGATCCCGATGGTGATGGGCTGGTCAAAGAGGTCTGGTTTCCAAATCGTTTGCTACCAATGAAAGCAGATATTTTTAGTCGGGTTGCCTGGCAATTACGTACCCGCTCAGGTGTAAACATCTATGCGTGGATGCCGGTATTAAGCTGGGATTTAGATCCCACATTAACGCGAGTAAAATACTTACCAACAGGGGAGAAAAAAGCACAAATTCATCCTGAACAATATCACCGTCTCTCTCCTTTCGATGACAGAGTCAGAGCACAAGTTGGCATGTTATATGAAGATCTTGCCGGACATGCTGCTTTTGATGGCATATTGTTCCACGATGATGCTTTGCTTTCAGATTATGAAGATGCCAGTGCACCGGCTATCACGGCTTATCAGCAAGCAGGCTTTAGCGGGAGTCTGAGCGAAATTCGACAAAACCCGGAGCAATTTAAACAGTGGGCCCGCTTTAAAAGTCGTGCGTTAACTGACTTCACTTTAGAACTTAGTGCGCGCGTAAAAGCCATTCGCGGTCCACATATTAAAACTGCACGAAATATTTTTGCACTTCCGGTAATACAACCTGAAAGTGAAGCCTGGTTTGCACAGAATTATGCTGATTTCCTAAAAAGCTATGACTGGACCGCTATTATGGCTATGCCTTATCTGGAAGGTGTCGCAGAAAAATCGGCTGACCAATGGTTAATACAATTGACCAATCAAATTAAAAACATCCCTCAGGCTAAAGACAAATCTATTTTAGAATTACAGGCACAAAACTGGCAGAAAAATGGTCAGCATCAGGCTATTTCTTCGCAACAACTCGCTCACTGGATGAGCCTATTACAACTGAATGGAGTGAAAAACTATGGTTATTATCCCGACAATTTTCTGCATAACCAACCTGAAATAGACCTTATTCGTCCTGAGTTTTCAACAGCCTGGTATCCGAAAAATGATTAA", - "dna_sequence_length": 2019, - "functions": [ - "poly-beta-1,6-N-acetyl-D-glucosamine (PGA) N-deacetylase outer membrane export lipoprotein" - ], - "id": "CDS_1005", - "location": [ - [ - "NC_000913", - 1089857, - "-", - 2019 - ] - ], - "md5": "56638c3fa3c0a48211adf0d8c8418f26", - "parent_gene": "", - "protein_md5": "107030cbb72fb262decf0411880b083f", - "protein_translation": "MLRNGNKYLLMLVSIIMLTACISQSRTSFIPPQDRESLLAEQPWPHNGFVAISWHNVEDEAADQRFMSVRTSALREQFAWLRENGYQPVSIAQIREAHRGGKPLPEKAVVLTFDDGYQSFYTRVFPILQAFQWPAVWAPVGSWVDTPADKQVKFGDELVDREYFATWQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPHVFVWPYGEANGIAIEELKKLGYDMFFTLESGLANASQLDSIPRVLIANNPSLKEFAQQIITVQEKSPQRIMHIDLDYVYDENLQQMDRNIDVLIQRVKDMQISTVYLQAFADPDGDGLVKEVWFPNRLLPMKADIFSRVAWQLRTRSGVNIYAWMPVLSWDLDPTLTRVKYLPTGEKKAQIHPEQYHRLSPFDDRVRAQVGMLYEDLAGHAAFDGILFHDDALLSDYEDASAPAITAYQQAGFSGSLSEIRQNPEQFKQWARFKSRALTDFTLELSARVKAIRGPHIKTARNIFALPVIQPESEAWFAQNYADFLKSYDWTAIMAMPYLEGVAEKSADQWLIQLTNQIKNIPQAKDKSILELQAQNWQKNGQHQAISSQQLAHWMSLLQLNGVKNYGYYPDNFLHNQPEIDLIRPEFSTAWYPKND", - "protein_translation_length": 672, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13865" - ], - [ - "gene_synonym", - "ycdS" - ], - [ - "gene_synonym", - "ECK1014" - ], - [ - "gene_synonym", - "JW1010" - ], - [ - "gene_synonym", - "pgaA" - ], - [ - "gene_synonym", - "GeneID:945596" - ], - [ - "gene_synonym", - "ASAP:ABE-0003469" - ], - [ - "gene_synonym", - "NP_415543.1" - ], - [ - "gene_synonym", - "b1024" - ], - [ - "gene_synonym", - "GI:16128988" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69434" - ] - ], - "dna_sequence": "ATGTATTCAAGTAGCAGAAAAAGGTGCCCGAAAACCAAATGGGCTTTGAAACTTCTTACTGCCGCATTTTTAGCAGCGAGTCCCGCGGCGAAGAGTGCTGTTAATAACGCCTATGATGCATTGATTATTGAAGCTCGCAAGGGTAATACTCAGCCAGCTTTGTCATGGTTTGCACTAAAATCAGCACTCAGCAATAACCAAATTGCTGACTGGTTACAGATTGCCTTATGGGCCGGGCAAGATAAACAGGTTATTACCGTTTACAACCGCTACCGTCATCAGCAATTACCAGCGCGTGGTTATGCAGCTGTCGCCGTCGCTTATCGTAACCTGCAACAATGGCAAAACTCGCTTACACTGTGGCAAAAGGCGCTCTCTCTGGAGCCGCAAAATAAGGATTATCAACGGGGACAAATTTTAACCCTGGCAGATGCTGGTCACTATGATACTGCGCTGGTTAAACTTAAGCAGCTTAACTCTGGAGCACCGGACAAAGCCAATTTACTCGCAGAAGCCTATATCTATAAACTGGCGGGGCGTCATCAGGATGAATTACGGGCGATGACAGAGTCATTACCTGAAAATGCATCTACGCAACAATATCCCACAGAATACGTGCAGGCATTACGTAATAATCAACTTGCTGCCGCGATTGACGATGCCAATTTAACGCCAGATATTCGCGCTGATATTCATGCCGAACTGGTCAGACTGTCGTTTATGCCTACGCGCAGTGAAAGTGAACGTTATGCCATTGCCGATCGCGCCCTCGCCCAATACGCTGCATTAGAAATTCTGTGGCACGATAACCCAGACCGCACTGCCCAGTACCAGCGTATTCAGGTTGATCATCTTGGCGCGTTATTAACTCGCGATCGTTATAAAGACGTTATTTCTCACTATCAGCGATTAAAAAAGACGGGGCAAATTATTCCGCCCTGGGGGCAATATTGGGTTGCATCGGCTTATCTCAAAGATCATCAGCCGAAAAAAGCACAGTCAATAATGACCGAGCTCTTTTATCACAAGGAGACCATTGCCCCGGATTTATCCGATGAAGAACTTGCGGATCTCTTTTACAGCCACCTGGAGAGTGAAAATTATCCGGGCGCGCTAACTGTCACCCAACATACCATTAATACTTCGCCGCCTTTCCTTCGGTTAATGGGCACGCCTACGAGCATCCCGAATGATACCTGGTTACAGGGGCATTCGTTTCTCTCAACCGTAGCAAAATATAGTAATGATCTTCCTCAGGCTGAAATGACAGCCAGAGAGCTTGCTTATAACGCACCAGGAAATCAGGGACTGCGCATTGATTACGCGAGTGTGTTACAAGCCCGCGGTTGGCCTCGTGCAGCAGAAAATGAATTAAAAAAAGCAGAAGTGATCGAGCCACGTAATATTAATCTGGAGGTTGAACAAGCCTGGACAGCATTAACGTTACAAGAATGGCAGCAGGCAGCTGTCTTAACGCACGATGTTGTCGAACGTGAACCGCAAGATCCCGGCGTTGTACGATTAAAACGTGCGGTTGATGTACATAATCTTGCAGAGCTTCGTATCGCTGGCTCAACAGGAATTGATGCCGAAGGCCCGGATAGTGGTAAACATGATGTCGACTTAACCACCATCGTTTATTCACCACCGCTGAAGGATAACTGGCGCGGTTTTGCTGGATTCGGTTATGCCGATGGACAATTTAGCGAAGGAAAAGGGATTGTTCGCGACTGGCTTGCGGGTGTTGAGTGGCGGTCACGTAATATCTGGCTCGAGGCAGAGTACGCTGAACGCGTTTTCAATCATGAGCATAAACCCGGCGCGCGCCTGTCTGGCTGGTATGATTTTAATGATAACTGGCGTATTGGTTCGCAACTGGAACGCCTCTCTCACCGCGTTCCATTACGGGCAATGAAAAATGGTGTTACAGGCAACAGTGCTCAGGCTTATGTTCGCTGGTATCAAAATGAGCGGCGTAAGTACGGTGTCTCCTGGGCTTTCACTGATTTTTCCGACAGTAACCAGCGTCATGAAGTCTCACTTGAGGGTCAGGAACGCATCTGGTCTTCACCATATTTGATTGTCGATTTCCTACCCAGTCTGTATTACGAACAAAATACAGAACACGATACCCCATACTACAACCCTATAAAAACGTTCGATATTGTTCCGGCATTTGAGGCAAGCCATTTGTTATGGCGAAGCTATGAAAATAGCTGGGAGCAAATATTCAGCGCAGGTGTTGGTGCCTCCTGGCAAAAACATTATGGCACGGATGTCGTCACCCAACTCGGCTACGGGCAACGCATTAGTTGGAATGACGTGATTGATGCTGGCGCAACGCTACGCTGGGAAAAACGACCTTATGACGGTGACAGAGAACACAACTTATACGTTGAATTCGATATGACATTCAGATTTTAA", - "dna_sequence_length": 2424, - "functions": [ - "biofilm adhesin polysaccharide PGA secretin", - "OM porin", - "poly-beta-1,6-N-acetyl-D-glucosamine export protein" - ], - "id": "CDS_1006", - "location": [ - [ - "NC_000913", - 1092289, - "-", - 2424 - ] - ], - "md5": "a405369139f43a3b5256164ed67e7537", - "parent_gene": "", - "protein_md5": "05b021c6d1aa356af80558101e262bbf", - "protein_translation": "MYSSSRKRCPKTKWALKLLTAAFLAASPAAKSAVNNAYDALIIEARKGNTQPALSWFALKSALSNNQIADWLQIALWAGQDKQVITVYNRYRHQQLPARGYAAVAVAYRNLQQWQNSLTLWQKALSLEPQNKDYQRGQILTLADAGHYDTALVKLKQLNSGAPDKANLLAEAYIYKLAGRHQDELRAMTESLPENASTQQYPTEYVQALRNNQLAAAIDDANLTPDIRADIHAELVRLSFMPTRSESERYAIADRALAQYAALEILWHDNPDRTAQYQRIQVDHLGALLTRDRYKDVISHYQRLKKTGQIIPPWGQYWVASAYLKDHQPKKAQSIMTELFYHKETIAPDLSDEELADLFYSHLESENYPGALTVTQHTINTSPPFLRLMGTPTSIPNDTWLQGHSFLSTVAKYSNDLPQAEMTARELAYNAPGNQGLRIDYASVLQARGWPRAAENELKKAEVIEPRNINLEVEQAWTALTLQEWQQAAVLTHDVVEREPQDPGVVRLKRAVDVHNLAELRIAGSTGIDAEGPDSGKHDVDLTTIVYSPPLKDNWRGFAGFGYADGQFSEGKGIVRDWLAGVEWRSRNIWLEAEYAERVFNHEHKPGARLSGWYDFNDNWRIGSQLERLSHRVPLRAMKNGVTGNSAQAYVRWYQNERRKYGVSWAFTDFSDSNQRHEVSLEGQERIWSSPYLIVDFLPSLYYEQNTEHDTPYYNPIKTFDIVPAFEASHLLWRSYENSWEQIFSAGVGASWQKHYGTDVVTQLGYGQRISWNDVIDAGATLRWEKRPYDGDREHNLYVEFDMTFRF", - "protein_translation_length": 807, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13866" - ], - [ - "gene_synonym", - "GeneID:945593" - ], - [ - "gene_synonym", - "ycdT" - ], - [ - "gene_synonym", - "ECK1015" - ], - [ - "gene_synonym", - "NP_415544.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003472" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75908" - ], - [ - "gene_synonym", - "b1025" - ], - [ - "gene_synonym", - "JW5143" - ], - [ - "gene_synonym", - "GI:16128989" - ] - ], - "dna_sequence": "ATGGAAAAAGACTATTTGAGAATTAGTAGTACTGTATTAGTGAGCTTATTGTTTGGGCTTGCTTTGGTTTTGGTGAATAGTTGGTTTAATCAGCCAGGCGTTGAGGAAGTTGTTCCACGATCAACCTATCTGATGGTAATGATTGCTTTATTTTTTATCGATACTGTTGCATTTATTTTTATGCAGTTGTATTTCATTTATGACCGTAGGCAATTTTCAAACTGTGTACTTAGTTTGGCTTTTCTGAGTTGTTTGATTTACTTTGTTATAACCGTCATTATCATTCAGCAAATTATTGAGGAGCGTTTGACAAGCAGTGTTGTCCAAAATGACATTGCAATCTATTATTTGTTTCGTCAGATGAGTTTGTGCATATTAATATTTCTGGCATTGGTGAATAAAGTTAGTGAAAACACAAAACAGCGCAATTTATTTTCCAAAAAAATGACTTTGTGCATAAGTTTGTTTTTTGTTTTTGGGGGGCCGATAGTTGCTCACATACTTTCTAGTCATTATGAGAGCTACAATTTACACATTGCCGAGTTAACCAATGAAAATGGTCAGGTGGTTTGGAAAGCCTCATATGTTACCATAATGATTTTCATGTGGTTAACCTTGCTTTCGGTTAATCTATACTTTAATGGTTTACGCTATGATATCTGGAATGGAGTGACGGTGATTGCTTTTTGTGCCGTACTGTACAATATCTCTCTGTTATTTATGAGCAGGTATAGCGTGTCCACTTGGTATATTAGTCGCACTATTGAAGTAGTCAGTAAGTTAACCGTTATGGTAATATTTATGTGCCATATATTCAGTGCGCTACGAGTAACAAAGAACATTGCACATCGCGATCCCTTAACCAATATATTTAACAGAAATTATTTTTTTAATGAACTGACAGTTCAATCAGCATCAGCCCAAAAAACGCCTTATTGCGTCATGATTATGGATATCGACCACTTCAAAAAAGTCAACGACACCTGGGGGCATCCGGTTGGCGATCAGGTGATAAAAACAGTGGTGAATATCATTGGGAAAAGCATACGACCAGATGACCTTTTAGCGCGCGTCGGCGGCGAAGAGTTTGGCGTCTTGCTGACGGACATCGATACTGAACGTGCGAAAGCTTTAGCGGAAAGGATTCGGGAAAATGTTGAGCGTTTAACTGGCGATAATCCTGAATACGCTATACCACAAAAAGTGACGATTAGTATTGGCGCTGTTGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGTGAGGGATGTGGTGAATTTTTGTGAGTCACCATAA", - "dna_sequence_length": 1359, - "functions": [ - "diguanylate cyclase, membrane-anchored" - ], - "id": "CDS_1007", - "location": [ - [ - "NC_000913", - 1092876, - "+", - 1359 - ] - ], - "md5": "f088ee6b668f2f245b8559b4fa7d15ae", - "parent_gene": "", - "protein_md5": "cd631c4055f99fff2a40d2592c38590b", - "protein_translation": "MEKDYLRISSTVLVSLLFGLALVLVNSWFNQPGVEEVVPRSTYLMVMIALFFIDTVAFIFMQLYFIYDRRQFSNCVLSLAFLSCLIYFVITVIIIQQIIEERLTSSVVQNDIAIYYLFRQMSLCILIFLALVNKVSENTKQRNLFSKKMTLCISLFFVFGGPIVAHILSSHYESYNLHIAELTNENGQVVWKASYVTIMIFMWLTLLSVNLYFNGLRYDIWNGVTVIAFCAVLYNISLLFMSRYSVSTWYISRTIEVVSKLTVMVIFMCHIFSALRVTKNIAHRDPLTNIFNRNYFFNELTVQSASAQKTPYCVMIMDIDHFKKVNDTWGHPVGDQVIKTVVNIIGKSIRPDDLLARVGGEEFGVLLTDIDTERAKALAERIRENVERLTGDNPEYAIPQKVTISIGAVVTQENALNPNEIYRLADNALYEAKETGRNKVVVRDVVNFCESP", - "protein_translation_length": 452, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003475" - ], - [ - "gene_synonym", - "NP_415545.1" - ], - [ - "gene_synonym", - "GeneID:945587" - ], - [ - "gene_synonym", - "EcoGene:EG40006" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF82" - ], - [ - "gene_synonym", - "insF1" - ], - [ - "gene_synonym", - "b1026" - ], - [ - "gene_synonym", - "GI:16128990" - ], - [ - "gene_synonym", - "ECK0299" - ] - ], - "dna_sequence": "ATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGACTGAGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAG", - "dna_sequence_length": 867, - "functions": [ - "IS3 transposase B" - ], - "id": "CDS_1008", - "location": [ - [ - "NC_000913", - 1095141, - "-", - 867 - ] - ], - "md5": "f16497ced719778b623ae488d3ff6549", - "parent_gene": "", - "protein_md5": "d747daab607a7e429605aaffca2556f8", - "protein_translation": "MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA", - "protein_translation_length": 288, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003477" - ], - [ - "gene_synonym", - "GeneID:945584" - ], - [ - "gene_synonym", - "EcoGene:EG40005" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF69" - ], - [ - "gene_synonym", - "insE1" - ], - [ - "gene_synonym", - "b1027" - ], - [ - "gene_synonym", - "NP_415546.2" - ], - [ - "gene_synonym", - "GI:226524706" - ], - [ - "gene_synonym", - "ECK0298" - ] - ], - "dna_sequence": "ATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA", - "dna_sequence_length": 300, - "functions": [ - "IS3 transposase A" - ], - "id": "CDS_1009", - "location": [ - [ - "NC_000913", - 1095437, - "-", - 300 - ] - ], - "md5": "2b8299a430402ee6e8586f7af8039b36", - "parent_gene": "", - "protein_md5": "03ddb941ec5f7556890ce78365da94d2", - "protein_translation": "MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK", - "protein_translation_length": 99, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ymdE" - ], - [ - "gene_synonym", - "ECK1016" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q7DFV4" - ], - [ - "gene_synonym", - "GeneID:945589" - ], - [ - "gene_synonym", - "ASAP:ABE-0003486" - ], - [ - "gene_synonym", - "EcoGene:EG14357" - ], - [ - "gene_synonym", - "b1028" - ], - [ - "gene_synonym", - "JW5145" - ] - ], - "dna_sequence": "GCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCAATTATCAAAGAAAATCTCTCATTACACTTAACTCATACGGTGAAATGGACTGAATCTCTCGATACATTTCTGAATATGCCAACCCCGGTAGCTTTCCTTGAAATAAGTAATAAGCCCTATTTGGGGAATATGTTAAATGATTTTGCTGGCGTGGATCAGCAACGAGTTATGCATTGTCGTAAAGCATTTAGTGATGCAAAGGTATTCAAATGA", - "dna_sequence_length": 342, - "id": "CDS_1010", - "location": [ - [ - "NC_000913", - 1095505, - "+", - 342 - ] - ], - "md5": "164b87cf6905d554f3d87ba80f47f60c", - "parent_gene": "", - "protein_md5": "e9009a37473a2cf2c69ac918de4271c2", - "protein_translation": "AWHTRLMEDGVQAMRDYLAGLDIASPEHQVLMNVTAKSEVAPSIIKENLSLHLTHTVKWTESLDTFLNMPTPVAFLEISNKPYLGNMLNDFAGVDQQRVMHCRKAFSDAKVFK", - "protein_translation_length": 113, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003489" - ], - [ - "gene_synonym", - "EcoGene:EG13867" - ], - [ - "gene_synonym", - "JW1015" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75910" - ], - [ - "gene_synonym", - "ycdU" - ], - [ - "gene_synonym", - "ECK1017" - ], - [ - "gene_synonym", - "NP_415548.1" - ], - [ - "gene_synonym", - "GeneID:945592" - ], - [ - "gene_synonym", - "GI:16128993" - ], - [ - "gene_synonym", - "b1029" - ] - ], - "dna_sequence": "ATGATTCCTGATTATTTAACTTTTATTCGCTTTCAGGATAAACGAAATCTGATATACATTTATGCTATTGGACTTATTCTGATAGGCTTTTATTGGAAGAATGCAGGGTTTACTTTTCCATCAGAGGATATTGGTGTAGTTAGTGGGATTCTGGCTCTGGTGCTGTATAATTTTATTTTTGATCTCAAGGCGTACTGGGCTTATAAATGCGTCACGAAGAATATCGATTTTTCGTGGTTTAAGAAAAAGCAGAACCACAAAATAGAATTATTTCTTACACAACCTCTGGTGGCAGGATTTCTGTCGTTAATCATGTTGAGTGCAATGAGTTGGGGGCTATACCAGCTTCTACCCTCGTTATATGCGCTGTTCCTGATTTCGTTACTTGGGCCGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCACCAGTTATGTCAAGCAGGTCGCTATTTCAGTAGCGAAAAAAGTAAAATATAAAAGTCTGACTCGCTATGTGCTGCTTTCGGTGTGCATCTCAACGGTTGTTAACCTGCTTACTATCAGCCCGTTGCGTAACAGTGATTCTTTTGTGACAGAGGGGCAGTGGTTAACGTTTAAATCGATAATTGCATTGCTCATTCTTTGTGGCGTAGTGTTGGCGATTAATCTGTTTTTTCTGCGCTTCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAGTGAAAATGCGTTGTCGACCTTTTTTGCCAAGCCGCTTTGGCTTCGGTTATTCATATTGCTGGTTATTGAAGTGATGTGGATTACGCTGGTGTCGGTATTGGCAACGCTTGTAGAATGGCGGATTTGGTTTGAAGCCTATTTTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGA", - "dna_sequence_length": 987, - "functions": [ - "putative inner membrane protein" - ], - "id": "CDS_1011", - "location": [ - [ - "NC_000913", - 1095843, - "+", - 987 - ] - ], - "md5": "9fec56fa990993e631fea9f73089c562", - "parent_gene": "", - "protein_md5": "443037e412687c305e27418c71575bab", - "protein_translation": "MIPDYLTFIRFQDKRNLIYIYAIGLILIGFYWKNAGFTFPSEDIGVVSGILALVLYNFIFDLKAYWAYKCVTKNIDFSWFKKKQNHKIELFLTQPLVAGFLSLIMLSAMSWGLYQLLPSLYALFLISLLGPLVIFLLFRMIRTSYVKQVAISVAKKVKYKSLTRYVLLSVCISTVVNLLTISPLRNSDSFVTEGQWLTFKSIIALLILCGVVLAINLFFLRFSKRYAFLGRLFLQEIDLFFSSENALSTFFAKPLWLRLFILLVIEVMWITLVSVLATLVEWRIWFEAYFLLCYVPCLIYYFFYCRFLWHNDFMMACDMYFRWGHFNK", - "protein_translation_length": 328, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ycdW" - ], - [ - "gene_synonym", - "ECK1019" - ], - [ - "gene_synonym", - "ghrA" - ], - [ - "gene_synonym", - "GeneID:946431" - ], - [ - "gene_synonym", - "EcoGene:EG13869" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75913" - ], - [ - "gene_synonym", - "b1033" - ], - [ - "gene_synonym", - "NP_415551.2" - ], - [ - "gene_synonym", - "GI:90111205" - ], - [ - "gene_synonym", - "ASAP:ABE-0003503" - ], - [ - "gene_synonym", - "JW5146" - ] - ], - "dna_sequence": "ATGGATATCATCTTTTATCACCCAACGTTCGATACCCAATGGTGGATTGAGGCACTGCGCAAAGCTATTCCTCAGGCAAGAGTCAGAGCATGGAAAAGCGGAGATAATGACTCTGCTGATTATGCTTTAGTCTGGCATCCTCCTGTTGAAATGCTGGCAGGGCGCGATCTTAAAGCGGTGTTCGCACTCGGGGCCGGTGTTGATTCTATTTTGAGCAAGCTACAGGCACACCCTGAAATGCTGAACCCTTCTGTTCCACTTTTTCGCCTGGAAGATACCGGTATGGGCGAGCAAATGCAGGAATATGCTGTCAGTCAGGTGCTGCATTGGTTTCGACGTTTTGACGATTATCGCATCCAGCAAAATAGTTCGCATTGGCAACCGCTGCCTGAATATCATCGGGAAGATTTTACCATCGGCATTTTGGGCGCAGGCGTACTGGGCAGTAAAGTTGCTCAGAGTCTGCAAACCTGGCGCTTTCCGCTGCGTTGCTGGAGTCGAACCCGTAAATCGTGGCCTGGCGTGCAAAGCTTTGCCGGACGGGAAGAACTGTCTGCATTTCTGAGCCAATGTCGGGTATTGATTAATTTGTTACCGAATACCCCTGAAACCGTCGGCATTATTAATCAACAATTACTCGAAAAATTACCGGATGGCGCGTATCTCCTCAACCTGGCGCGTGGTGTTCATGTTGTGGAAGATGACCTGCTCGCGGCGCTGGATAGCGGCAAAGTTAAAGGCGCAATGTTGGATGTTTTTAATCGTGAACCCTTACCGCCTGAAAGTCCGCTCTGGCAACATCCACGCGTGACGATAACACCACATGTCGCCGCGATTACCCGTCCCGCTGAAGCTGTGGAGTACATTTCTCGCACCATTGCCCAGCTCGAAAAAGGGGAGAGGGTCTGCGGGCAAGTCGACCGCGCACGCGGCTACTAA", - "dna_sequence_length": 939, - "functions": [ - "glyoxylate/hydroxypyruvate reductase A" - ], - "id": "CDS_1012", - "location": [ - [ - "NC_000913", - 1097886, - "+", - 939 - ] - ], - "md5": "6cdb13ce3879cf1d22f8213443ffe37e", - "parent_gene": "", - "protein_md5": "9ce746d7611832d309bb4dd16adfb71a", - "protein_translation": "MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALVWHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHREDFTIGILGAGVLGSKVAQSLQTWRFPLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPDGAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHVAAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY", - "protein_translation_length": 312, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1017" - ], - [ - "gene_synonym", - "ASAP:ABE-0003508" - ], - [ - "gene_synonym", - "NP_415552.1" - ], - [ - "gene_synonym", - "EcoGene:EG13870" - ], - [ - "gene_synonym", - "ycdX" - ], - [ - "gene_synonym", - "GeneID:948477" - ], - [ - "gene_synonym", - "ECK1020" - ], - [ - "gene_synonym", - "GI:16128997" - ], - [ - "gene_synonym", - "b1034" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75914" - ] - ], - "dna_sequence": "ATGTATCCCGTCGACCTTCATATGCATACCGTTGCCAGCACACATGCATATAGCACATTAAGTGATTACATTGCCCAGGCCAAACAAAAGGGCATTAAACTTTTTGCGATCACCGATCATGGCCCGGATATGGAAGATGCGCCGCATCACTGGCACTTCATTAACATGCGTATCTGGCCGCGAGTGGTTGATGGGGTAGGGATCCTGCGCGGCATCGAAGCTAACATTAAAAATGTTGATGGTGAAATTGACTGCAGCGGTAAAATGTTTGACTCGCTGGATCTAATTATTGCCGGTTTTCATGAGCCGGTTTTTGCGCCACATGACAAAGCGACCAATACACAAGCGATGATCGCCACTATCGCCAGCGGCAATGTGCATATAATAAGCCATCCCGGAAATCCCAAATATGAAATAGATGTGAAAGCCGTTGCTGAAGCAGCCGCGAAACATCAGGTGGCGCTGGAAATCAATAATTCCTCATTTTTACACTCACGTAAGGGCAGTGAAGACAACTGTCGTGAGGTAGCCGCAGCGGTACGTGATGCTGGAGGTTGGGTGGCATTAGGCTCGGATTCTCACACCGCGTTTACCATGGGGGAATTTGAAGAGTGTCTTAAAATCCTCGACGCGGTAGATTTTCCGCCAGAGCGCATTTTGAATGTTTCTCCGCGCCGCTTACTGAACTTCCTTGAATCTCGCGGTATGGCACCGATTGCGGAATTTGCAGACCTTTAA", - "dna_sequence_length": 738, - "functions": [ - "alkaline phosphatase" - ], - "id": "CDS_1013", - "location": [ - [ - "NC_000913", - 1098879, - "+", - 738 - ] - ], - "md5": "1d2c0b520d6936dda1630161b51f5cfb", - "parent_gene": "", - "protein_md5": "bd3073b09524393ed6f41fb22eabd1e8", - "protein_translation": "MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDMEDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIAGFHEPVFAPHDKATNTQAMIATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNSSFLHSRKGSEDNCREVAAAVRDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPERILNVSPRRLLNFLESRGMAPIAEFADL", - "protein_translation_length": 245, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13871" - ], - [ - "gene_synonym", - "NP_415553.1" - ], - [ - "gene_synonym", - "GeneID:945609" - ], - [ - "gene_synonym", - "ycdY" - ], - [ - "gene_synonym", - "ECK1021" - ], - [ - "gene_synonym", - "JW1018" - ], - [ - "gene_synonym", - "b1035" - ], - [ - "gene_synonym", - "ASAP:ABE-0003511" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75915" - ], - [ - "gene_synonym", - "GI:16128998" - ] - ], - "dna_sequence": "ATGAACGAGTTTTCTATCCTCTGTCGTGTGCTGGGTTCGCTCTATTACCGCCAACCACAAGATCCTTTACTGGTGCCGCTGTTTACCCTGATTCGTGAGGGGAAACTGGCTGCGAACTGGCCACTGGAGCAGGATGAGTTGCTGACACGTTTGCAGAAAAGCTGTGATATGACGCAAGTCTCTGCCGATTACAATGCGTTGTTTATCGGCGATGAATGTGCTGTGCCGCCATATCGTAGCGCATGGGTTGAGGGCGCGACGGAAGCGGAAGTGCGCGCTTTTCTTTCTGAGCGAGGGATGCCATTAGCGGATACGCCAGCCGATCACATCGGCACATTGCTGCTCGCAGCTTCCTGGCTGGAAGATCAGTCAACGGAAGATGAGAGCGAAGCACTGGAAACACTGTTCAGTGAGTATCTGTTACCCTGGTGTGGTGCGTTCCTTGGCAAAGTGGAGGCCCATGCAACCACGCCTTTCTGGCGCACCATGGCACCGCTAACCCGCGATGCCATTAGTGCAATGTGGGACGAGCTGGAAGAAGATTCTGAAGAATAA", - "dna_sequence_length": 555, - "functions": [ - "redox enzyme maturation protein (REMP) chaperone for YcdX" - ], - "id": "CDS_1014", - "location": [ - [ - "NC_000913", - 1099640, - "+", - 555 - ] - ], - "md5": "bcdcfcfc8a0cda3178784c61f7375be2", - "parent_gene": "", - "protein_md5": "33ddad67eb91298cd65bde74be7d1547", - "protein_translation": "MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQDELLTRLQKSCDMTQVSADYNALFIGDECAVPPYRSAWVEGATEAEVRAFLSERGMPLADTPADHIGTLLLAASWLEDQSTEDESEALETLFSEYLLPWCGAFLGKVEAHATTPFWRTMAPLTRDAISAMWDELEEDSEE", - "protein_translation_length": 184, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945617" - ], - [ - "gene_synonym", - "EcoGene:EG13872" - ], - [ - "gene_synonym", - "ycdZ" - ], - [ - "gene_synonym", - "b1036" - ], - [ - "gene_synonym", - "ECK1022" - ], - [ - "gene_synonym", - "NP_415554.4" - ], - [ - "gene_synonym", - "nupT" - ], - [ - "gene_synonym", - "GI:90111206" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75916" - ], - [ - "gene_synonym", - "JW5147" - ], - [ - "gene_synonym", - "ASAP:ABE-0003514" - ] - ], - "dna_sequence": "ATGAACATACTTCTCTCTATTGCAATCACAACAGGCATTCTCTCCGGTATCTGGGGATGGGTGGCTGTTTCCCTGGGCTTACTAAGCTGGGCGGGCTTCCTGGGCTGTACGGCCTACTTTGCCTGCCCGCAAGGTGGGCTGAAAGGGCTGGCGATCTCCGCTGCAACCCTGCTTAGTGGCGTGGTGTGGGCGATGGTCATTATTTACGGTAGTGCACTGGCACCACATCTGGAAATTCTCGGTTATGTCATAACCGGTATTGTCGCGTTTCTGATGTGTATTCAGGCCAAACAGCTGCTGCTTTCATTTGTTCCGGGGACGTTTATAGGCGCATGCGCGACGTTTGCCGGGCAGGGTGACTGGAAACTGGTGTTACCTTCGCTGGCGCTTGGGCTGATATTTGGTTACGCAATGAAAAACAGTGGCCTGTGGCTGGCGGCGCGTAGTGCAAAGACGGCGCACCGTGAGCAGGAAATCAAAAATAAAGCGTGA", - "dna_sequence_length": 492, - "functions": [ - "DUF1097 family inner membrane protein" - ], - "id": "CDS_1015", - "location": [ - [ - "NC_000913", - 1100296, - "+", - 492 - ] - ], - "md5": "372dc2178f9e9e9616499e32b8b12b93", - "parent_gene": "", - "protein_md5": "7a7d16eea61fcbb68b9d2e70f8da94c6", - "protein_translation": "MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGLAISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLSFVPGTFIGACATFAGQGDWKLVLPSLALGLIFGYAMKNSGLWLAARSAKTAHREQEIKNKA", - "protein_translation_length": 163, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEA2" - ], - [ - "gene_synonym", - "NP_415555.1" - ], - [ - "gene_synonym", - "GI:16129000" - ], - [ - "gene_synonym", - "GeneID:945619" - ], - [ - "gene_synonym", - "ECK1023" - ], - [ - "gene_synonym", - "ASAP:ABE-0003516" - ], - [ - "gene_synonym", - "EcoGene:EG13413" - ], - [ - "gene_synonym", - "b1037" - ], - [ - "gene_synonym", - "csgG" - ], - [ - "gene_synonym", - "agfG" - ], - [ - "gene_synonym", - "JW1020" - ] - ], - "dna_sequence": "ATGCAGCGCTTATTTCTTTTGGTTGCCGTCATGTTACTGAGCGGATGCTTAACCGCCCCGCCTAAAGAAGCCGCCAGACCGACATTAATGCCTCGTGCTCAGAGCTACAAAGATTTGACCCATCTGCCAGCGCCGACGGGTAAAATCTTTGTTTCGGTATACAACATTCAGGACGAAACCGGGCAATTTAAACCCTACCCGGCAAGTAACTTCTCCACTGCTGTTCCGCAAAGCGCCACGGCAATGCTGGTCACGGCACTGAAAGATTCTCGCTGGTTTATACCGCTGGAGCGCCAGGGCTTACAAAACCTGCTTAACGAGCGCAAGATTATTCGTGCGGCACAAGAAAACGGCACGGTTGCCATTAATAACCGAATCCCGCTGCAATCTTTAACGGCGGCAAATATCATGGTTGAAGGTTCGATTATCGGTTATGAAAGCAACGTCAAATCTGGCGGGGTTGGGGCAAGATATTTTGGCATCGGTGCCGACACGCAATACCAGCTCGATCAGATTGCCGTGAACCTGCGCGTCGTCAATGTGAGTACCGGCGAGATCCTTTCTTCGGTGAACACCAGTAAGACGATACTTTCCTATGAAGTTCAGGCCGGGGTTTTCCGCTTTATTGACTACCAGCGCTTGCTTGAAGGGGAAGTGGGTTACACCTCGAACGAACCTGTTATGCTGTGCCTGATGTCGGCTATCGAAACAGGGGTCATTTTCCTGATTAATGATGGTATCGACCGTGGTCTGTGGGATTTGCAAAATAAAGCAGAACGGCAGAATGACATTCTGGTGAAATACCGCCATATGTCGGTTCCACCGGAATCCTGA", - "dna_sequence_length": 834, - "functions": [ - "curli production assembly/transport outer membrane lipoprotein" - ], - "id": "CDS_1016", - "location": [ - [ - "NC_000913", - 1101684, - "-", - 834 - ] - ], - "md5": "bde2ccf4049fc90b3aeaefeaa3cb7887", - "parent_gene": "", - "protein_md5": "43f80aa9c42c08085b9e300c22e49970", - "protein_translation": "MQRLFLLVAVMLLSGCLTAPPKEAARPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDETGQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTVAINNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFGIGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEVGYTSNEPVMLCLMSAIETGVIFLINDGIDRGLWDLQNKAERQNDILVKYRHMSVPPES", - "protein_translation_length": 277, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415556.1" - ], - [ - "gene_synonym", - "ECK1024" - ], - [ - "gene_synonym", - "GI:16129001" - ], - [ - "gene_synonym", - "ASAP:ABE-0003519" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE98" - ], - [ - "gene_synonym", - "EcoGene:EG13412" - ], - [ - "gene_synonym", - "b1038" - ], - [ - "gene_synonym", - "csgF" - ], - [ - "gene_synonym", - "agfF" - ], - [ - "gene_synonym", - "GeneID:945622" - ], - [ - "gene_synonym", - "JW1021" - ] - ], - "dna_sequence": "ATGCGTGTCAAACATGCAGTAGTTCTACTCATGCTTATTTCGCCATTAAGTTGGGCTGGAACCATGACTTTCCAGTTCCGTAATCCAAACTTTGGTGGTAACCCAAATAATGGCGCTTTTTTATTAAATAGCGCTCAGGCCCAAAACTCTTATAAAGATCCGAGCTATAACGATGACTTTGGTATTGAAACACCCTCAGCGTTAGATAACTTTACTCAGGCCATCCAGTCACAAATTTTAGGTGGGCTACTGTCGAATATTAATACCGGTAAACCGGGCCGCATGGTGACCAACGATTATATTGTCGATATTGCCAACCGCGATGGTCAATTGCAGTTGAACGTGACAGATCGTAAAACCGGACAAACCTCGACCATCCAGGTTTCGGGTTTACAAAATAACTCAACCGATTTTTAA", - "dna_sequence_length": 417, - "functions": [ - "curli nucleation outer membrane protein" - ], - "id": "CDS_1017", - "location": [ - [ - "NC_000913", - 1102127, - "-", - 417 - ] - ], - "md5": "37b1ba45af5ca678cc6c61daa4b82610", - "parent_gene": "", - "protein_md5": "3cbfc0c9fbef801dfbd868b7db9901fa", - "protein_translation": "MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDFGIETPSALDNFTQAIQSQILGGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKTGQTSTIQVSGLQNNSTDF", - "protein_translation_length": 138, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1025" - ], - [ - "gene_synonym", - "GI:16129002" - ], - [ - "gene_synonym", - "ASAP:ABE-0003528" - ], - [ - "gene_synonym", - "EcoGene:EG13411" - ], - [ - "gene_synonym", - "b1039" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE95" - ], - [ - "gene_synonym", - "csgE" - ], - [ - "gene_synonym", - "JW1022" - ], - [ - "gene_synonym", - "NP_415557.1" - ], - [ - "gene_synonym", - "GeneID:945711" - ], - [ - "gene_synonym", - "agfE" - ] - ], - "dna_sequence": "ATGAAACGTTATTTACGCTGGATTGTGGCGGCAGAATTTCTGTTCGCCGCAGGGAATCTTCACGCCGTTGAGGTAGAAGTCCCGGGATTGCTAACTGACCATACTGTTTCATCTATTGGCCATGATTTTTACCGAGCCTTTAGTGATAAATGGGAAAGTGACTATACGGGTAACTTAACGATTAATGAAAGGCCCAGTGCACGATGGGGAAGCTGGATCACTATAACGGTCAATCAGGACGTTATTTTCCAGACTTTTTTATTTCCGTTGAAAAGAGACTTCGAGAAAACTGTCGTCTTTGCACTGATTCAAACTGAAGAAGCACTAAATCGTCGCCAGATAAATCAGGCGTTATTAAGTACGGGCGATTTGGCGCATGATGAATTCTAA", - "dna_sequence_length": 390, - "functions": [ - "curlin secretion specificity factor" - ], - "id": "CDS_1018", - "location": [ - [ - "NC_000913", - 1102541, - "-", - 390 - ] - ], - "md5": "a24fb422531fda31bdebe4d96bf3b011", - "parent_gene": "", - "protein_md5": "81e30ecf38cdb07c6e8dcfc6d04c85a1", - "protein_translation": "MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLTINERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF", - "protein_translation_length": 129, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003530" - ], - [ - "gene_synonym", - "NP_415558.1" - ], - [ - "gene_synonym", - "ECK1026" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52106" - ], - [ - "gene_synonym", - "b1040" - ], - [ - "gene_synonym", - "EcoGene:EG13410" - ], - [ - "gene_synonym", - "GI:16129003" - ], - [ - "gene_synonym", - "GeneID:949119" - ], - [ - "gene_synonym", - "csgD" - ], - [ - "gene_synonym", - "JW1023" - ], - [ - "gene_synonym", - "agfD" - ] - ], - "dna_sequence": "ATGTTTAATGAAGTCCATAGTATTCATGGTCATACATTATTGTTGATCACTAAATCTTCTTTGCAGGCGACAGCTCTCTTGCAGCACCTTAAACAATCGCTGGCAATTACAGGAAAATTACATAATATTCAACGTTCTCTGGACGATATCTCTTCAGGCTCTATTATTCTTCTGGATATGATGGAAGCGGATAAAAAGCTTATCCATTATTGGCAGGATACTTTGAGCAGGAAAAACAACAATATCAAAATATTGTTGCTAAATACGCCTGAAGATTACCCGTACCGCGACATTGAAAACTGGCCTCATATCAACGGCGTTTTTTATTCCATGGAGGATCAAGAACGTGTTGTCAATGGGTTGCAAGGCGTCCTGCGCGGCGAATGCTACTTTACGCAAAAGCTTGCCAGCTACCTGATTACGCATTCAGGTAACTATCGTTATAACAGCACGGAATCAGCCCTCCTTACTCATCGGGAAAAAGAGATCCTGAATAAGCTGCGTATCGGCGCGTCTAATAACGAGATCGCTCGTTCGTTGTTCATCAGCGAAAATACGGTTAAAACGCATCTTTATAATCTTTTCAAGAAGATAGCCGTAAAAAACCGGACACAAGCGGTTTCCTGGGCAAACGATAACCTCAGGCGATAA", - "dna_sequence_length": 651, - "functions": [ - "csgBAC operon transcriptional regulator" - ], - "id": "CDS_1019", - "location": [ - [ - "NC_000913", - 1103196, - "-", - 651 - ] - ], - "md5": "dd03e02d438ee67dd03990e457981f29", - "parent_gene": "", - "protein_md5": "5e25048121e1c8e85602a729b9dc269a", - "protein_translation": "MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR", - "protein_translation_length": 216, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003534" - ], - [ - "gene_synonym", - "ECK1027" - ], - [ - "gene_synonym", - "NP_415559.1" - ], - [ - "gene_synonym", - "GI:16129004" - ], - [ - "gene_synonym", - "EcoGene:EG12621" - ], - [ - "gene_synonym", - "GeneID:947391" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABK7" - ], - [ - "gene_synonym", - "b1041" - ], - [ - "gene_synonym", - "agfB" - ], - [ - "gene_synonym", - "JW1024" - ], - [ - "gene_synonym", - "csgB" - ] - ], - "dna_sequence": "ATGAAAAACAAATTGTTATTTATGATGTTAACAATACTGGGTGCGCCTGGGATTGCAGCCGCAGCAGGTTATGATTTAGCTAATTCAGAATATAACTTCGCGGTAAATGAATTGAGTAAGTCTTCATTTAATCAGGCAGCCATAATTGGTCAAGCTGGGACTAATAATAGTGCTCAGTTACGGCAGGGAGGCTCAAAACTTTTGGCGGTTGTTGCGCAAGAAGGTAGTAGCAACCGGGCAAAGATTGACCAGACAGGAGATTATAACCTTGCATATATTGATCAGGCGGGCAGTGCCAACGATGCCAGTATTTCGCAAGGTGCTTATGGTAATACTGCGATGATTATCCAGAAAGGTTCTGGTAATAAAGCAAATATTACACAGTATGGTACTCAAAAAACGGCAATTGTAGTGCAGAGACAGTCGCAAATGGCTATTCGCGTGACACAACGTTAA", - "dna_sequence_length": 456, - "functions": [ - "curlin nucleator protein, minor subunit in curli complex" - ], - "id": "CDS_1020", - "location": [ - [ - "NC_000913", - 1103951, - "+", - 456 - ] - ], - "md5": "f83a8abd56dcb40772b1e3c9354c1535", - "parent_gene": "", - "protein_md5": "ff868b3e5174eae1e4b69f228cbb012e", - "protein_translation": "MKNKLLFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFNQAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIVVQRQSQMAIRVTQR", - "protein_translation_length": 151, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1025" - ], - [ - "gene_synonym", - "ECK1028" - ], - [ - "gene_synonym", - "ASAP:ABE-0003537" - ], - [ - "gene_synonym", - "EcoGene:EG11489" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28307" - ], - [ - "gene_synonym", - "NP_415560.1" - ], - [ - "gene_synonym", - "GeneID:949055" - ], - [ - "gene_synonym", - "GI:16129005" - ], - [ - "gene_synonym", - "b1042" - ], - [ - "gene_synonym", - "agfA" - ], - [ - "gene_synonym", - "csgA" - ] - ], - "dna_sequence": "ATGAAACTTTTAAAAGTAGCAGCAATTGCAGCAATCGTATTCTCCGGTAGCGCTCTGGCAGGTGTTGTTCCTCAGTACGGCGGCGGCGGTAACCACGGTGGTGGCGGTAATAATAGCGGCCCAAATTCTGAGCTGAACATTTACCAGTACGGTGGCGGTAACTCTGCACTTGCTCTGCAAACTGATGCCCGTAACTCTGACTTGACTATTACCCAGCATGGCGGCGGTAATGGTGCAGATGTTGGTCAGGGCTCAGATGACAGCTCAATCGATCTGACCCAACGTGGCTTCGGTAACAGCGCTACTCTTGATCAGTGGAACGGCAAAAATTCTGAAATGACGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAA", - 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"protein_translation": "MFRPFLNSLMLGSLFFPFIAIAGSTVQGGVIHFYGQIVEPACDVSTQSSPVEMNCPQNGSIPGKTYSSKALMSGNVKNAQIASVKVQYLDKQKKLAVMNIEYN", - "protein_translation_length": 103, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13874" - ], - [ - "gene_synonym", - "GI:16129008" - ], - [ - "gene_synonym", - "ymdB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8D6" - ], - [ - "gene_synonym", - "ECK1031" - ], - [ - "gene_synonym", - "GeneID:946987" - ], - [ - "gene_synonym", - "ASAP:ABE-0003549" - ], - [ - "gene_synonym", - "b1045" - ], - [ - "gene_synonym", - "NP_415563.1" - ], - [ - "gene_synonym", - "JW1032" - ] - ], - "dna_sequence": "ATGAAAACGCGTATTCATGTTGTGCAGGGTGATATTACCAAACTGGCCGTTGATGTGATTGTGAATGCGGCTAATCCGTCATTAATGGGAGGCGGCGGCGTCGATGGGGCCATTCATCGCGCAGCGGGTCCGGCCCTGCTGGATGCTTGTTTAAAAGTCAGGCAACAGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGCACACCGTCGGGCCAGTCTGGCGTGGTGGTGAACAAAACGAAGACCAGCTTTTGCAGGATGCCTATCTCAATAGCCTACGACTGGTGGCGGCAAACAGCTATACGTCAGTGGCTTTTCCTGCAATCAGTACTGGGGTTTATGGTTACCCTCGTGCGGCAGCGGCTGAAATCGCAGTAAAAACCGTTTCAGAATTTATTACCCGTCACGCTTTACCCGAACAGGTATACTTTGTCTGTTATGATGAAGAAAACGCCCACCTCTACGAAAGACTCCTTACCCAACAAGGAGATGAATGA", - "dna_sequence_length": 534, - "functions": [ - "O-acetyl-ADP-ribose deacetylase", - "RNase III inhibitor during cold shock", - "putative cardiolipin synthase C regulatory subunit" - ], - "id": "CDS_1024", - "location": [ - [ - "NC_000913", - 1105820, - "+", - 534 - ] - ], - "md5": "3521b21f47fc3df15290b437f1d69e4b", - "parent_gene": "", - "protein_md5": "564233cc09f9d1c7cf9967ffcf8472f6", - "protein_translation": "MKTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQGDCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYDEENAHLYERLLTQQGDE", - "protein_translation_length": 177, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13875" - ], - [ - "gene_synonym", - "NP_415564.2" - ], - [ - "gene_synonym", - "ymdC" - ], - [ - "gene_synonym", - "ASAP:ABE-0003551" - ], - [ - "gene_synonym", - "ECK1032" - ], - [ - "gene_synonym", - "GeneID:947321" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75919" - ], - [ - "gene_synonym", - "b1046" - ], - [ - "gene_synonym", - "clsC" - ], - [ - "gene_synonym", - "JW5150" - ], - [ - "gene_synonym", - "GI:90111207" - ] - ], - "dna_sequence": "TTGCCCCGGCTGGCGAGCGCGGTGCTGCCACTGTGTTCGCAACATCCCGGTCAGTGTGGCCTTTTTCCTCTGGAGAAAAGTCTGGATGCGTTTGCCGCCCGGTATCGTCTGGCCGAAATGGCAGAGCATACGCTCGATGTTCAGTATTACATCTGGCAGGACGATATGTCGGGTCGGTTACTGTTTTCCGCCCTGTTAGCCGCAGCAAAGCGTGGCGTTCGCGTCCGTTTGTTGCTGGACGACAACAATACGCCCGGACTTGACGACATTTTACGCTTGCTTGACAGTCATCCACGCATTGAAGTCCGGCTTTTTAATCCTTTCTCGTTTCGCTTGCTGCGTCCGCTTGGTTATATCACCGACTTTTCCCGTCTTAATCGCCGTATGCACAATAAAAGTTTCACTGTCGATGGCGTGGTGACCCTGGTGGGAGGACGAAATATTGGTGATGCCTATTTTGGAGCAGGGGAGGAGCCACTTTTTTCGGATTTAGATGTCATGGCAATAGGACCCGTGGTAGAGGACGTTGCCGATGATTTCGCCCGCTACTGGTATTGCAAATCGGTTTCACCCTTACAGCAGGTGCTGGATGTCCCGGAGGGTGAAATGGCGGATCGCATCGAGTTACCCGCCTCCTGGCATAACGATGCCATGACGCATCGTTATTTACGCAAAATGGAATCCAGTCCATTTATAAATCATCTGGTTGATGGAACATTGCCGCTTATCTGGGCGAAGACACGTTTATTAAGTGATGATCCGGCGAAAGGGGAGGGCAAGGCAAAACGGCATTCACTGTTACCGCAGCGCCTGTTCGATATCATGGGCTCACCCAGTGAACGCATCGATATTATCTCTTCCTATTTTGTACCGACACGCGCAGGTGTGGCGCAACTCTTACGGATGGTGAGAAAAGGGGTAAAGATTGCGATCCTAACCAATTCTCTTGCCGCTAACGATGTTGCTGTCGTCCATGCCGGATACGCGCGCTGGCGCAAAAAATTGCTCCGCTATGGCGTGGAATTATATGAACTCAAGCCGACGCGTGAACAAAGTAGTACGTTACACGATCGCGGCATAACCGGTAATTCCGGAGCCAGCCTGCATGCTAAAACCTTTAGCATCGATGGTAAAACGGTGTTTATCGGCTCTTTCAATTTCGATCCGCGTTCAACATTGCTCAATACTGAAATGGGCTTCGTGATAGAGAGCGAAACGCTGGCACAGTTAATTGATAAACGCTTTATTCAGAGCCAGTATGATGCGGCCTGGCAGCTCCGTCTGGACAGGTGGGGACGGATCAACTGGGTTGATCGTCATGCAAAGAAAGAGATTATTCTCAAAAAAGAACCCGCCACCAGTTTCTGGAAGCGGGTTATGGTCAGACTGGCGTCGATATTGCCCGTGGAATGGTTATTGTAA", 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"ASAP:ABE-0003553" - ], - [ - "gene_synonym", - "ECK1033" - ], - [ - "gene_synonym", - "NP_415565.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75920" - ], - [ - "gene_synonym", - "b1047" - ], - [ - "gene_synonym", - "mdoC" - ], - [ - "gene_synonym", - "opgC" - ], - [ - "gene_synonym", - "JW1034" - ], - [ - "gene_synonym", - "EcoGene:EG13876" - ], - [ - "gene_synonym", - "GI:16129010" - ] - ], - "dna_sequence": "ATGAACCCAGTACCCGCGCAACGTGAATATTTCCTCGACTCCATCCGCGCCTGGCTGATGTTGTTAGGGATACCTTTTCATATTTCTTTAATCTATTCGAGCCATACATGGCATGTGAATAGCGCCGAATCATCATTGTGGCTGACCCTTTTTAATGACTTCATCCACTCGTTCCGCATGCAGGTATTTTTCGTTATATCCGGCTACTTTTCCTACATGCTTTTTTTACGCTATCCCTTGAAAAAATGGTGGAAAGTACGTGTCGAACGTGTAGGTATCCCGATGTTAACAGCCATCCCCCTACTGACATTACCGCAATTTATTATGCTGCAATATGTCAAAGGAAAAGCGGAAAGTTGGCCTGGGCTGTCATTGTATGACAAATATAATACGTTGGCCTGGGAATTAATATCACACCTGTGGTTTTTACTGGTGTTAGTGGTCATGACGACGCTGTGCGTATGGATATTTAAGCGCATCAGAAATAATTTAGAAAATTCTGATAAAACGAATAAAAAATTCTCGATGGTAAAACTATCGGTGATTTTTTTATGCCTCGGCATCGGTTATGCGGTAATAAGAAGAACGATTTTTATTGTGTATCCGCCCATTCTGAGTAATGGCATGTTCAATTTTATTGTCATGCAAACGCTGTTTTATTTGCCGTTCTTTATCCTCGGCGCACTGGCTTTCATTTTCCCTCATCTTAAAGCCTTGTTTACCACGCCGTCTCGTGGCTGTACCCTTGCAGCAGCATTGGCGTTTGTCGCTTATTTACTCAACCAGCGCTATGGCAGTGGCGATGCCTGGATGTACGAAACCGAGTCGGTGATCACCATGGTCCTCGGTCTGTGGATGGTGAATGTGGTCTTCTCCTTTGGCCACCGTTTGCTTAACTTCCAGTCAGCGCGGGTGACTTATTTTGTTAACGCATCGCTGTTTATCTATCTGGTTCACCACCCGTTAACGCTGTTTTTCGGCGCATACATTACACCGCACATCACCTCCAACTGGCTTGGTTTTCTCTGTGGCCTGATATTTGTAGTAGGGATTGCGATAATTCTGTATGAAATTCATTTGCGCATCCCGTTACTGAAGTTTTTGTTCTCTGGTAAACCGGTTGTTAAGCGTGAGAACGATAAAGCACCAGCCCGTTAA", 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[ - "gene_synonym", - "mdoG" - ], - [ - "gene_synonym", - "NP_415566.1" - ], - [ - "gene_synonym", - "opgG" - ], - [ - "gene_synonym", - "GI:16129011" - ], - [ - "gene_synonym", - "EcoGene:EG11885" - ], - [ - "gene_synonym", - "mdoA" - ], - [ - "gene_synonym", - "JW1035" - ], - [ - "gene_synonym", - "b1048" - ] - ], - "dna_sequence": "ATGATGAAAATGCGTTGGTTGAGTGCTGCAGTAATGTTAACCCTGTATACATCTTCAAGCTGGGCTTTCAGTATTGATGATGTCGCAAAGCAAGCTCAATCTTTAGCCGGGAAAGGCTACGAGACGCCCAAAAGCAACTTGCCCTCCGTTTTCCGCGATATGAAATACGCGGACTATCAGCAGATCCAGTTTAATCATGACAAAGCGTACTGGAACAATCTGAAGACCCCATTCAAACTCGAGTTCTACCATCAGGGTATGTACTTCGATACCCCGGTCAAAATAAATGAAGTGACTGCCACCGCAGTCAAACGAATCAAATACAGCCCGGATTATTTCACTTTCGGCGATGTTCAGCATGACAAAGATACGGTAAAAGACCTTGGCTTTGCCGGTTTTAAAGTGCTTTACCCGATCAACAGCAAAGATAAAAACGATGAAATCGTCAGCATGCTCGGGGCCAGCTATTTCCGCGTGATTGGTGCAGGTCAGGTTTATGGCCTTTCTGCCCGCGGCCTGGCAATTGATACCGCCTTGCCATCGGGTGAAGAATTTCCGCGCTTCAAAGAGTTCTGGATCGAGCGTCCAAAACCGACTGATAAACGTTTAACCATCTATGCATTGCTTGACTCGCCGCGTGCGACAGGTGCTTACAAATTCGTGGTTATGCCAGGGCGTGACACGGTTGTGGATGTGCAGTCGAAAATCTATCTGCGCGATAAAGTCGGCAAACTGGGGGTTGCACCGTTAACCAGTATGTTCCTGTTTGGGCCGAACCAACCGTCGCCTGCAAATAACTATCGTCCGGAGTTGCACGACTCTAACGGTCTCTCTATCCATGCCGGTAATGGCGAATGGATCTGGCGTCCGTTGAATAACCCGAAACATTTAGCGGTCAGCAGCTTCTCCATGGAAAACCCGCAAGGCTTTGGTCTGTTGCAGCGCGGTCGTGATTTCTCCCGCTTTGAAGATCTCGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACATCGTCGCTTACTGGACGCCGGATCAGCTGCCGGAGCCGGGTAAAGAGATGAACTTTAAATACACCATCACCTTCAGCCGTGATGAAGACAAACTGCATGCGCCAGATAACGCATGGGTGCAACAAACGCGTCGTTCAACGGGGGATGTGAAGCAGTCGAACCTGATTCGCCAGCCTGACGGTACTATCGCCTTTGTGGTCGATTTTACCGGCGCAGAGATGAAAAAACTGCCAGAGGATACCCCGGTCACAGCGCAAACCAGCATTGGTGATAATGGTGAGATAGTTGAAAGCACGGTGCGCTATAACCCGGTTACCAAAGGCTGGCGTCTGGTGATGCGTGTGAAAGTGAAAGATGCCAAGAAAACCACTGAAATGCGTGCTGCGCTGGTGAATGCCGATCAGACGTTGAGTGAAACCTGGAGCTACCAGTTACCTGCCAATGAATAA", 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[ - "gene_synonym", - "GI:16129012" - ], - [ - "gene_synonym", - "ECK1035" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P62517" - ], - [ - "gene_synonym", - "EcoGene:EG11886" - ], - [ - "gene_synonym", - "mdoA" - ], - [ - "gene_synonym", - "JW1037" - ], - [ - "gene_synonym", - "GeneID:945624" - ], - [ - "gene_synonym", - "opgH" - ], - [ - "gene_synonym", - "b1049" - ], - [ - "gene_synonym", - "mdoH" - ], - [ - "gene_synonym", - "NP_415567.1" - ] - ], - "dna_sequence": "ATGAATAAGACAACTGAGTACATTGACGCAATGCCCATCGCCGCAAGCGAGAAAGCGGCATTGCCGAAGACTGATATCCGCGCCGTTCATCAGGCGCTGGATGCCGAACACCGCACCTGGGCGCGGGAGGATGATTCCCCGCAAGGCTCGGTAAAGGCGCGTCTGGAACAAGCCTGGCCAGATTCACTTGCTGATGGACAGTTAATTAAAGACGACGAAGGGCGCGATCAGCTGAAGGCGATGCCAGAAGCAAAACGCTCCTCGATGTTTCCCGACCCGTGGCGTACCAACCCGGTAGGCCGTTTCTGGGATCGCCTGCGTGGACGCGATGTCACGCCGCGCTATCTGGCTCGTTTGACCAAAGAAGAGCAGGAGAGCGAGCAAAAGTGGCGTACCGTCGGTACCATCCGCCGTTACATTCTGTTGATCCTGACGCTCGCGCAAACTGTCGTCGCGACCTGGTATATGAAGACCATTCTTCCTTATCAGGGTTGGGCGCTGATTAATCCTATGGATATGGTTGGTCAGGATTTGTGGGTTTCCTTTATGCAGCTTCTGCCTTATATGCTGCAAACCGGTATCCTGATCCTCTTTGCGGTACTGTTCTGTTGGGTGTCCGCCGGATTCTGGACGGCGTTAATGGGCTTCCTGCAACTGCTTATTGGTCGCGATAAATACAGTATATCTGCGTCAACAGTTGGCGATGAACCATTAAACCCGGAGCATCGCACGGCGTTGATCATGCCTATCTGTAACGAAGACGTGAACCGTGTTTTTGCTGGCCTGCGTGCAACGTGGGAATCAGTAAAAGCCACCGGGAATGCCAAACACTTTGATGTCTACATTCTTAGTGACAGTTATAACCCGGATATCTGCGTCGCAGAGCAAAAAGCCTGGATGGAGCTTATCGCTGAAGTCGGTGGCGAAGGTCAGATTTTCTATCGCCGCCGCCGTCGCCGCGTGAAGCGTAAAAGCGGTAATATCGATGACTTCTGCCGTCGCTGGGGCAGCCAGTACAGCTACATGGTGGTGCTGGATGCTGACTCGGTAATGACCGGTGATTGTTTGTGCGGGCTGGTGCGCCTGATGGAAGCCAACCCGAACGCCGGGATCATTCAGTCGTCGCCGAAAGCGTCCGGTATGGATACGCTGTATGCGCGCTGTCAGCAGTTCGCGACCCGCGTGTATGGGCCACTGTTTACAGCCGGTTTGCACTTCTGGCAACTTGGCGAGTCGCACTACTGGGGACATAACGCGATTATCCGCGTGAAACCGTTTATCGAGCACTGCGCACTGGCTCCGCTGCCGGGCGAAGGTTCCTTTGCCGGTTCAATCCTGTCACATGACTTCGTGGAAGCGGCGTTGATGCGCCGTGCAGGTTGGGGGGTCTGGATTGCTTACGATCTCCCGGGTTCTTATGAAGAATTGCCGCCTAACTTGCTTGATGAGCTAAAACGTGACCGCCGATGGTGCCACGGTAACCTGATGAACTTCCGTCTGTTCCTGGTGAAGGGTATGCACCCGGTTCACCGTGCGGTGTTCCTGACGGGCGTGATGTCTTATCTCTCCGCTCCGCTGTGGTTTATGTTCCTCGCGCTCTCTACTGCATTGCAGGTAGTGCATGCGTTGACCGAACCGCAATACTTCCTGCAACCACGGCAGTTGTTCCCAGTGTGGCCGCAGTGGCGTCCTGAGCTGGCGATTGCACTTTTTGCTTCGACCATGGTGCTGTTGTTCCTGCCGAAGTTATTGAGCATTTTGCTTATCTGGTGCAAAGGAACGAAAGAATACGGCGGCTTCTGGCGCGTTACATTATCGTTGCTGCTGGAAGTGCTTTTTTCCGTGCTGCTGGCTCCGGTACGCATGCTGTTCCATACGGTCTTCGTTGTCAGCGCGTTCCTTGGCTGGGAAGTGGTGTGGAATTCACCGCAGCGTGATGATGACTCCACTTCCTGGGGTGAAGCGTTCAAACGCCACGGCTCACAGCTGCTGTTAGGGTTAGTGTGGGCTGTTGGGATGGCGTGGCTGGATCTGCGTTTCCTGTTCTGGCTGGCACCGATTGTCTTCTCGTTGATCCTGTCACCGTTTGTTTCGGTGATTTCCAGCCGTGCCACCGTTGGTCTGCGCACCAAACGCTGGAAACTGTTCCTGATCCCGGAAGAGTATTCGCCGCCGCAGGTGCTGGTTGATACCGATCGGTTCCTTGAGATGAATCGTCAACGCTCCCTTGATGATGGCTTTATGCACGCAGTGTTTAACCCGTCATTTAACGCTCTGGCAACCGCAATGGCGACCGCGCGTCACCGCGCCAGTAAGGTGCTGGAAATCGCCCGTGACCGCCACGTTGAACAGGCGCTGAACGAGACGCCAGAGAAGCTGAATCGCGATCGTCGCCTGGTGCTGCTAAGCGATCCGGTGACGATGGCCCGTCTGCATTTCCGTGTCTGGAATTCCCCGGAGAGATATTCTTCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAA", 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"MNKTTEYIDAMPIAASEKAALPKTDIRAVHQALDAEHRTWAREDDSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRFWDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTILPYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQLLIGRDKYSISASTVGDEPLNPEHRTALIMPICNEDVNRVFAGLRATWESVKATGNAKHFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRRWGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFATRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWPQWRPELAIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLFHTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLFWLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPEEYSPPQVLVDTDRFLEMNRQRSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRRLVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ", - "protein_translation_length": 847, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945613" - ], - [ - "gene_synonym", - "EcoGene:EG12689" - ], - [ - "gene_synonym", - "b1050" - ], - [ - "gene_synonym", - "ECK1036" - ], - [ - "gene_synonym", - "ASAP:ABE-0003565" - ], - [ - "gene_synonym", - "NP_415568.1" - ], - [ - "gene_synonym", - "GI:16129013" - ], - [ - "gene_synonym", - "yceK" - ], - [ - "gene_synonym", - "JW5151" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB31" - ] - ], - "dna_sequence": "ATGCGTTTAATTGTGGTGAGCATCATGGTGACCTTGCTGAGTGGCTGTGGCAGCATTATTAGTCGCACTATACCGGGGCAGGGGCATGGCAACCAATATTATCCCGGTGTGCAATGGGATGTGCGTGACTCCGCCTGGCGTTATGTCACGATCCTTGATCTGCCATTCTCTCTGGTTTTTGATACTTTACTGCTGCCGATCGACATTCATCATGGCCCGTATGAGTGA", - "dna_sequence_length": 228, - "functions": [ - "outer membrane integrity lipoprotein" - ], - "id": "CDS_1029", - "location": [ - [ - "NC_000913", - 1113579, - "+", - 228 - ] - ], - "md5": "75d2b90ee6dd386a6756d8e0051fcdf1", - "parent_gene": "", - "protein_md5": "27f676681a6362b462ec3b4fcb0ed417", - "protein_translation": "MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDSAWRYVTILDLPFSLVFDTLLLPIDIHHGPYE", - "protein_translation_length": 75, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945612" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25738" - ], - [ - "gene_synonym", - "msyB" - ], - [ - "gene_synonym", - "b1051" - ], - [ - "gene_synonym", - "ECK1037" - ], - [ - "gene_synonym", - "ASAP:ABE-0003567" - ], - [ - "gene_synonym", - "NP_415569.4" - ], - [ - "gene_synonym", - "GI:90111208" - ], - [ - "gene_synonym", - "JW1039" - ], - [ - "gene_synonym", - "EcoGene:EG11338" - ] - ], - "dna_sequence": "ATGACCATGTACGCAACGCTTGAAGAAGCCATTGACGCTGCACGCGAAGAATTTCTTGCAGACAACCCCGGCATCGACGCCGAAGATGCGAATGTGCAACAGTTCAATGCCCAAAAATACGTTTTGCAGGACGGCGACATCATGTGGCAAGTTGAGTTTTTTGCCGACGAAGGGGAAGAAGGTGAATGTTTACCTATGCTTAGCGGTGAAGCCGCGCAAAGTGTTTTTGATGGCGACTATGATGAGATAGAGATACGCCAGGAGTGGCAGGAAGAGAATACATTACATGAATGGGACGAGGGGGAATTTCAGCTTGAGCCACCGCTGGATACCGAGGAAGGACGCGCAGCAGCTGATGAGTGGGATGAACGTTAA", - "dna_sequence_length": 375, - "functions": [ - "multicopy suppressor of secY and secA" - ], - "id": "CDS_1030", - "location": [ - [ - "NC_000913", - 1114181, - "-", - 375 - ] - ], - "md5": "7c9c22e211a91d6a8c8ae68e0e8eeb9f", - "parent_gene": "", - "protein_md5": "d9e18784e818e532bdf30ea5ef71f2fa", - "protein_translation": "MTMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQDGDIMWQVEFFADEGEEGECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGEFQLEPPLDTEEGRAAADEWDER", - "protein_translation_length": 124, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1038" - ], - [ - "gene_synonym", - "EcoGene:EG11343" - ], - [ - "gene_synonym", - "b1053" - ], - [ - "gene_synonym", - "JW1040" - ], - [ - "gene_synonym", - "ASAP:ABE-0003572" - ], - [ - "gene_synonym", - "GI:16129016" - ], - [ - "gene_synonym", - "mdtG" - ], - [ - "gene_synonym", - "yceE" - ], - [ - "gene_synonym", - "GeneID:945627" - ], - [ - "gene_synonym", - "NP_415571.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25744" - ] - ], - "dna_sequence": "ATGTCACCCTGTGAAAATGACACCCCTATAAACTGGAAACGAAACCTGATCGTCGCCTGGCTAGGCTGTTTTCTTACCGGTGCCGCCTTCAGTCTGGTAATGCCCTTCTTACCCCTCTACGTTGAGCAGCTTGGCGTTACCGGTCACTCCGCCCTGAATATGTGGTCCGGTATTGTCTTCAGCATTACATTTTTATTTTCGGCCATCGCCTCACCGTTTTGGGGTGGACTCGCCGACCGTAAAGGCCGAAAACTCATGCTATTACGCTCTGCCCTCGGCATGGGCATCGTGATGGTGTTGATGGGGCTGGCACAAAATATCTGGCAGTTTTTGATCCTGCGGGCGCTTCTTGGGTTACTTGGCGGATTTGTCCCCAACGCTAATGCTCTTATCGCCACACAAGTACCGCGTAATAAAAGCGGCTGGGCGCTGGGTACGCTCTCCACAGGCGGCGTTAGTGGTGCGTTGCTCGGCCCAATGGCTGGCGGCCTGCTCGCCGATAGCTACGGCTTACGTCCGGTATTCTTTATTACCGCCAGTGTGCTCATACTCTGCTTTTTCGTCACCCTGTTTTGCATCAGAGAAAAATTCCAGCCGGTCAGCAAAAAAGAGATGCTGCACATGCGGGAAGTGGTGACATCACTTAAAAACCCGAAACTGGTACTCAGCCTGTTTGTCACTACGTTAATCATCCAGGTGGCGACGGGCTCAATTGCCCCCATTCTGACGCTGTATGTCCGCGAACTGGCGGGTAACGTCAGTAACGTCGCCTTTATCAGTGGCATGATCGCCTCGGTGCCAGGCGTGGCGGCTCTGCTAAGTGCACCACGACTCGGCAAACTTGGCGATCGAATCGGACCCGAAAAGATCCTGATTACAGCGCTGATCTTTTCTGTACTGCTGTTGATCCCAATGTCTTACGTTCAGACGCCATTGCAACTTGGGATTTTACGTTTTTTGCTCGGTGCCGCCGATGGTGCACTACTCCCCGCCGTACAGACACTGTTGGTTTACAACTCGAGCAACCAGATCGCCGGGCGTATCTTCAGCTATAACCAATCGTTTCGTGATATTGGCAACGTTACCGGACCATTGATGGGAGCAGCGATTTCAGCGAACTACGGTTTCAGAGCGGTATTTCTCGTCACCGCTGGCGTAGTGTTATTCAACGCAGTCTATTCATGGAACAGTCTACGTCGTCGTCGAATACCCCAGGTATCGAACTGA", - "dna_sequence_length": 1227, - "functions": [ - "putative drug efflux system protein" - ], - "id": "CDS_1031", - "location": [ - [ - "NC_000913", - 1115490, - "-", - 1227 - ] - ], - "md5": "aac906b7ba2810d1ea0e373bb9f2c0bf", - "parent_gene": "", - "protein_md5": "941f877beffd9bc430aa3e946905e822", - "protein_translation": "MSPCENDTPINWKRNLIVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGIVFSITFLFSAIASPFWGGLADRKGRKLMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPMAGGLLADSYGLRPVFFITASVLILCFFVTLFCIREKFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNVAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSYVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRRRRIPQVSN", - "protein_translation_length": 408, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946216" - ], - [ - "gene_synonym", - "ECK1039" - ], - [ - "gene_synonym", - "htrB" - ], - [ - "gene_synonym", - "NP_415572.1" - ], - [ - "gene_synonym", - "JW1041" - ], - [ - "gene_synonym", - "waaM" - ], - [ - "gene_synonym", - "b1054" - ], - [ - "gene_synonym", - "GI:16129017" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACV0" - ], - [ - "gene_synonym", - "EcoGene:EG10464" - ], - [ - "gene_synonym", - "ASAP:ABE-0003574" - ], - [ - "gene_synonym", - "lpxL" - ] - ], - "dna_sequence": "ATGACGAATCTACCCAAGTTCTCCACCGCACTGCTTCATCCGCGTTATTGGTTAACCTGGTTGGGTATTGGCGTACTTTGGTTAGTCGTGCAATTGCCCTACCCGGTTATCTACCGCCTCGGTTGTGGATTAGGAAAACTGGCGTTACGTTTTATGAAACGACGCGCAAAAATTGTGCATCGCAACCTGGAACTGTGCTTCCCGGAAATGAGCGAACAAGAACGCCGTAAAATGGTGGTGAAGAATTTCGAATCCGTTGGCATGGGCCTGATGGAAACCGGCATGGCGTGGTTCTGGCCGGACCGCCGAATCGCCCGCTGGACGGAAGTGATCGGCATGGAACACATTCGTGACGTGCAGGCGCAAAAACGCGGCATCCTGTTAGTTGGCATCCATTTTCTGACACTGGAGCTGGGTGCGCGGCAGTTTGGTATGCAGGAACCGGGTATTGGCGTTTATCGCCCGAACGATAATCCACTGATTGACTGGCTACAAACCTGGGGCCGTTTGCGCTCAAATAAATCGATGCTCGACCGCAAAGATTTAAAAGGCATGATTAAAGCCCTGAAAAAAGGCGAAGTGGTCTGGTACGCACCGGATCATGATTACGGCCCGCGCTCAAGCGTTTTCGTCCCGTTGTTTGCCGTTGAGCAGGCTGCGACCACGACCGGAACCTGGATGCTGGCACGGATGTCCGGCGCATGTCTGGTGCCCTTCGTTCCACGCCGTAAGCCAGATGGCAAAGGGTATCAATTGATTATGCTGCCGCCAGAGTGTTCTCCGCCACTGGATGATGCCGAAACTACCGCCGCGTGGATGAACAAAGTGGTCGAAAAATGCATCATGATGGCACCAGAGCAGTATATGTGGTTACACCGTCGCTTTAAAACACGCCCGGAAGGCGTTCCTTCACGCTATTAA", - "dna_sequence_length": 921, - "functions": [ - "lauryl-acyl carrier protein (ACP)-dependent acyltransferase" - ], - "id": "CDS_1032", - "location": [ - [ - "NC_000913", - 1116582, - "-", - 921 - ] - ], - "md5": "2c9c7ffe1f607cbf3f7ed45d16eb99ef", - "parent_gene": "", - "protein_md5": "6c599b7fb76e732c980913832a93871c", - "protein_translation": "MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGLGKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDRRIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPLIDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQAATTTGTWMLARMSGACLVPFVPRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKVVEKCIMMAPEQYMWLHRRFKTRPEGVPSRY", - "protein_translation_length": 306, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945601" - ], - [ - "gene_synonym", - "ASAP:ABE-0003581" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24188" - ], - [ - "gene_synonym", - "EcoGene:EG11116" - ], - [ - "gene_synonym", - "NP_415573.1" - ], - [ - "gene_synonym", - "JW1042" - ], - [ - "gene_synonym", - "yceA" - ], - [ - "gene_synonym", - "b1055" - ], - [ - "gene_synonym", - "GI:16129018" - ], - [ - "gene_synonym", - "ECK1040" - ] - ], - "dna_sequence": "ATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATCCTAAGGCGACCCGTGACGCTTTATATCAGCTGTTTACCGCGCTGAATGTTTTTGGGCGAGTGTATCTGGCGCATGAGGGCATTAACGCGCAAATCAGCGTACCTGCGAGCAATGTTGAAACATTTCGCGCGCAGCTCTATGCCTTCGACCCGGCTTTAGAGGGTTTACGCCTGAATATCGCGTTGGATGATGACGGGAAATCCTTCTGGGTACTGCGCATGAAGGTACGCGATCGCATTGTTGCCGACGGTATTGACGATCCTCACTTTGATGCCAGCAATGTTGGTGAGTATCTGCAAGCGGCGGAAGTGAACGCCATGCTTGACGATCCCGATGCACTATTTATCGACATGCGTAACCACTATGAGTATGAAGTGGGGCACTTTGAAAACGCGCTCGAAATTCCGGCAGATACCTTCCGTGAGCAGCTGCCAAAAGCAGTCGAGATGATGCAGGCACATAAAGATAAAAAAATCGTCATGTACTGCACCGGCGGCATTCGTTGTGAAAAGGCCAGTGCCTGGATGAAACATAACGGATTCAACAAAGTCTGGCATATCGAGGGCGGAATTATTGAATACGCCCGTAAGGCGCGCGAGCAGGGCTTGCCGGTGCGTTTTATTGGCAAAAATTTTGTTTTTGACGAGCGGATGGGCGAACGTATATCGGATGAGATTATCGCGCATTGCCACCAGTGCGGCGCGCCGTGCGACAGCCATACCAACTGTAAAAATGATGGCTGCCACCTGCTGTTTATTCAGTGTCCAGTATGCGCGGAAAAATACAAAGGTTGTTGTAGTGAGATTTGCTGCGAAGAAAGCGCGTTACCGCCAGAAGAACAGCGACGCCGTCGGGCAGGACGTGAAAATGGCAATAAGATCTTTAATAAGTCTCGTGGACGTCTGAATACAACACTGTGCATTCCTGATCCAACAGAATAA", - "dna_sequence_length": 1053, - "functions": [ - "putative rhodanese-related sulfurtransferase" - ], - "id": "CDS_1033", - "location": [ - [ - "NC_000913", - 1116807, - "+", - 1053 - ] - ], - "md5": "8d3a8025df1a8f6d160befab0ff1b7b3", - "parent_gene": "", - "protein_md5": "3dd5ca176a8335918527f6e49d32cbc8", - "protein_translation": "MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKATRDALYQLFTALNVFGRVYLAHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDDGKSFWVLRMKVRDRIVADGIDDPHFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYEYEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRRRRAGRENGNKIFNKSRGRLNTTLCIPDPTE", - "protein_translation_length": 350, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003583" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8X2" - ], - [ - "gene_synonym", - "GeneID:946145" - ], - [ - "gene_synonym", - "b1056" - ], - [ - "gene_synonym", - "JW1043" - ], - [ - "gene_synonym", - "EcoGene:EG11820" - ], - [ - "gene_synonym", - "yceI" - ], - [ - "gene_synonym", - "GI:16129019" - ], - [ - "gene_synonym", - "ECK1041" - ], - [ - "gene_synonym", - "NP_415574.1" - ] - ], - "dna_sequence": "ATGAAAAAAAGCCTGCTTGGTTTAACCTTCGCGTCCCTGATGTTCTCTGCCGGTTCAGCGGTTGCCGCCGATTACAAAATTGACAAAGAAGGTCAGCACGCCTTTGTTAATTTCCGCATCCAGCACCTTGGCTATAGCTGGTTATACGGCACCTTTAAAGATTTCGACGGTACTTTTACCTTTGACGAAAAAAATCCGGCTGCCGATAAAGTGAATGTGACAATTAACACCACCAGCGTCGATACTAATCACGCCGAACGCGATAAACATCTTCGCAGTGCAGATTTCCTCAATACCGCAAAATATCCACAGGCAACATTCACCTCCACCAGCGTGAAGAAAGACGGTGACGAACTGGATATTACCGGCGATCTGACGCTGAATGGCGTAACCAAACCCGTCACGCTGGAAGCGAAATTAATTGGTCAGGGCGACGACCCATGGGGTGGTAAACGTGCAGGCTTCGAGGCCGAAGGCAAAATTAAGCTCAAGGACTTCAATATCAAGACAGATTTAGGTCCAGCTTCTCAGGAAGTGGATCTGATTATTTCAGTGGAAGGCGTACAGCAGAAGTAA", - "dna_sequence_length": 576, - "functions": [ - "periplasmic high pH-inducible lipid-binding protein" - ], - "id": "CDS_1034", - "location": [ - [ - "NC_000913", - 1118476, - "-", - 576 - ] - ], 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"MSFTNTPERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAARAGHLALYLLLFAIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHGFMALKHHFIDKDDTLKRMLGKSSSDYGV", - "protein_translation_length": 188, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1058" - ], - [ - "gene_synonym", - "ASAP:ABE-0003588" - ], - [ - "gene_synonym", - "yceO" - ], - [ - "gene_synonym", - "NP_415576.1" - ], - [ - "gene_synonym", - "GI:16129021" - ], - [ - "gene_synonym", - "EcoGene:EG14334" - ], - [ - "gene_synonym", - "GeneID:945629" - ], - [ - "gene_synonym", - "JW1045" - ], - [ - "gene_synonym", - "ECK1043" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64442" - ] - ], - "dna_sequence": "ATGAGGCCGTTTTTACAGGAGTATTTAATGCGTCGGCTGTTGCACTATCTCATCAATAATATTCGCGAGCATCTGATGCTTTATCTTTTTCTCTGGGGATTGTTGGCAATTATGGATCTGATCTATGTGTTTTATTTTTAG", - "dna_sequence_length": 141, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1036", - "location": [ - [ - "NC_000913", - 1119447, - "-", - 141 - ] - ], - "md5": "be8279a23b0d4860a5faafa196bdcae9", - "parent_gene": "", - "protein_md5": "e8a7f3a1191b80e840fc13ba4a5b87ef", - "protein_translation": "MRPFLQEYLMRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFYF", - "protein_translation_length": 46, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415577.1" - ], - [ - "gene_synonym", - "b1059" - ], - [ - "gene_synonym", - "ASAP:ABE-0003590" - ], - [ - "gene_synonym", - "JW1046" - ], - [ - "gene_synonym", - "EcoGene:EG12669" - ], - [ - "gene_synonym", - "GeneID:944983" - ], - [ - "gene_synonym", - "solA" - ], - [ - "gene_synonym", - "GI:16129022" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P40874" - ], - [ - "gene_synonym", - "ECK1044" - ] - ], - "dna_sequence": 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"gene_synonym", - "EcoGene:EG14335" - ], - [ - "gene_synonym", - "bssS" - ], - [ - "gene_synonym", - "JW5152" - ], - [ - "gene_synonym", - "ECK1045" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB33" - ], - [ - "gene_synonym", - "GeneID:946104" - ] - ], - "dna_sequence": "ATGGAAAAAAATAATGAAGTCATTCAGACTCATCCGCTCGTAGGGTGGGACATCAGCACCGTTGATAGCTATGATGCGCTGATGTTGCGTTTGCACTACCAGACCCCAAATAAGTCCGAGCAGGAAGGGACTGAAGTTGGTCAGACGCTCTGGTTAACCACTGATGTTGCCAGACAATTTATTTCGATATTAGAAGCAGGAATCGCCAAAATTGAATCCGGTGATTTCCAGGTAAACGAGTATCGGCGTCATTAA", - "dna_sequence_length": 255, - "functions": [ - "biofilm regulator" - ], - "id": "CDS_1038", - "location": [ - [ - "NC_000913", - 1120955, - "-", - 255 - ] - ], - "md5": "2d59f856f97ad19a4db0c054acfd3e29", - "parent_gene": "", - "protein_md5": "5af841e045682f26b4c0ce5b97d1f90f", - "protein_translation": "MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQTPNKSEQEGTEVGQTLWLTTDVARQFISILEAGIAKIESGDFQVNEYRRH", - "protein_translation_length": 84, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1048" - ], - [ - "gene_synonym", - "EcoGene:EG12670" - ], - [ - "gene_synonym", - "NP_415579.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003599" - ], - [ - "gene_synonym", - "dinI" - ], - [ - "gene_synonym", - "b1061" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABR1" - ], - [ - "gene_synonym", - "GI:16129024" - ], - [ - "gene_synonym", - "ECK1046" - ], - [ - "gene_synonym", - "GeneID:945022" - ] - ], - "dna_sequence": "ATGCGAATTGAAGTCACCATAGCGAAAACTTCTCCATTGCCAGCTGGGGCTATTGACGCCCTGGCTGGCGAACTTTCCCGCCGTATTCAGTATGCGTTTCCTGATAATGAAGGCCACGTATCGGTACGTTATGCCGCAGCGAATAATTTATCGGTTATTGGCGCGACAAAAGAAGATAAACAGCGCATTAGTGAAATTCTCCAGGAAACGTGGGAAAGCGCCGATGACTGGTTTGTCAGCGAATAA", - "dna_sequence_length": 246, - "functions": [ - "DNA damage-inducible protein I" - ], - "id": "CDS_1039", - "location": [ - [ - "NC_000913", - 1121487, - "-", - 246 - ] - ], - "md5": "e64bfa39bbc7ca3f67cf3c4fca57d974", - "parent_gene": "", - "protein_md5": "46aeaec8f464c962863c5da2c65b296e", - "protein_translation": "MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKQRISEILQETWESADDWFVSE", - "protein_translation_length": 81, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1049" - ], - [ - "gene_synonym", - "EcoGene:EG10806" - ], - [ - "gene_synonym", - "GeneID:945787" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05020" - ], - [ - "gene_synonym", - "b1062" - ], - [ - "gene_synonym", - "ASAP:ABE-0003607" - ], - [ - "gene_synonym", - "GI:16129025" - ], - [ - "gene_synonym", - "ECK1047" - ], - [ - "gene_synonym", - "pyrC" - ], - [ - "gene_synonym", - "NP_415580.1" - ] - ], - "dna_sequence": 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"GTGAAGCTATACATTTACGATCACTGCCCTTACTGCCTCAAAGCCCGCATGATTTTCGGCCTGAAAAATATCCCCGTCGAATTACATGTTCTGCTCAACGACGACGCAGAAACACCCACCCGGATGGTCGGTCAAAAACAGGTTCCCATTCTGCAAAAAGATGACAGCCGCTATATGCCAGAAAGCATGGACATCGTTCACTATGTCGATAAACTCGACGGCAAACCGTTACTGACCGGCAAACGTTCCCCTGCCATTGAAGAGTGGCTGCGCAAGGTCAATGGCTACGCCAACAAACTGCTGTTGCCGCGTTTTGCCAAATCGGCATTTGATGAGTTTTCTACTCCCGCCGCGCGCAAATATTTCGTCGACAAGAAAGAGGCCAGCGCGGGTAATTTTGCCGACCTGCTGGCCCACTCTGACGGTCTGATTAAGAATATCAGCGATGATTTACGTGCGCTGGACAAACTGATCGTCAAACCGAACGCCGTGAATGGCGAACTTTCGGAAGATGATATTCAGCTATTCCCGCTACTGCGTAATCTGACGCTGGTAGCCGGAATTAACTGGCCAAGCCGCGTTGCTGATTACCGCGATAATATGGCGAAACAGACACAAATCAATTTGTTATCATCAATGGCGATTTAA", - "dna_sequence_length": 648, - "functions": [ - "glutaredoxin 2 (Grx2)" - ], - "id": "CDS_1042", - "location": [ - [ - "NC_000913", - 1124054, - "-", - 648 - ] - ], - "md5": "4383288f87b0d8eba923be2a1b6b3278", - "parent_gene": "", - "protein_md5": "ff86e71c2da27e32c3da8fa5fc4342ad", - "protein_translation": "MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVGQKQVPILQKDDSRYMPESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYANKLLLPRFAKSAFDEFSTPAARKYFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVKPNAVNGELSEDDIQLFPLLRNLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI", - "protein_translation_length": 215, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69367" - ], - [ - "gene_synonym", - "JW1052" - ], - [ - "gene_synonym", - "b1065" - ], - [ - "gene_synonym", - "NP_415583.4" - ], - [ - "gene_synonym", - "EcoGene:EG13878" - ], - [ - "gene_synonym", - "GI:90111209" - ], - [ - "gene_synonym", - "GeneID:946920" - ], - [ - "gene_synonym", - "ASAP:ABE-0003618" - ], - [ - "gene_synonym", - "mdtH" - ], - [ - "gene_synonym", - "ECK1050" - ], - [ - "gene_synonym", - "yceL" - ] - ], - "dna_sequence": "ATGTCCCGCGTGTCGCAGGCGAGGAACCTGGGTAAATATTTCCTGCTCATCGATAATATGCTGGTCGTGCTGGGGTTCTTTGTTGTCTTCCCGCTGATCTCTATCCGCTTCGTTGATCAAATGGGCTGGGCCGCCGTCATGGTCGGTATTGCTCTCGGTCTACGCCAATTTATTCAGCAAGGTCTGGGTATTTTCGGCGGTGCAATTGCCGACCGCTTTGGTGCCAAACCGATGATTGTTACCGGTATGCTGATGCGCGCCGCCGGATTCGCCACAATGGGTATCGCCCACGAACCGTGGCTATTGTGGTTTTCATGCCTGCTCTCGGGACTCGGTGGCACGTTGTTTGATCCGCCGCGTTCGGCGCTGGTGGTGAAATTAATCCGTCCACAGCAGCGTGGTCGTTTTTTCTCGCTGTTGATGATGCAGGACAGTGCCGGTGCGGTCATTGGCGCATTGTTGGGGAGCTGGCTGTTGCAATACGACTTTCGCCTGGTCTGCGCCACAGGGGCAGTTCTATTTGTGCTATGTGCGGCGTTCAATGCGTGGTTGTTACCAGCATGGAAACTCTCCACCGTACGCACGCCCGTTCGCGAAGGCATGACCCGCGTGATGCGTGACAAGCGTTTTGTCACCTATGTTCTGACGCTGGCGGGTTACTACATGCTGGCTGTACAAGTGATGCTGATGCTGCCAATTATGGTCAACGACGTGGCTGGCGCGCCCTCTGCCGTTAAATGGATGTATGCCATTGAAGCGTGTCTGTCGTTAACGTTGCTCTACCCTATCGCCCGCTGGAGTGAAAAGCATTTTCGTCTGGAACACCGGTTGATGGCTGGGCTGTTGATAATGTCATTAAGCATGATGCCGGTGGGCATGGTCAGCGGCCTGCAACAACTTTTCACCCTGATTTGTCTGTTTTATATCGGGTCGATCATTGCCGAGCCTGCGCGTGAAACCTTAAGTGCTTCGCTGGCGGACGCAAGAGCTCGCGGCAGCTATATGGGGTTTAGCCGTCTGGGTCTGGCGATTGGCGGCGCTATTGGTTATATCGGTGGCGGCTGGCTGTTTGACCTGGGCAAATCGGCGCACCAGCCAGAGCTTCCGTGGATGATGCTGGGCATTATTGGCATCTTCACTTTCCTTGCGCTGGGTTGGCAGTTTAGCCAGAAACGCGCCGCGCGTCGTTTGCTTGAACGCGACGCCTGA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P0A948" - ], - [ - "gene_synonym", - "JW1053" - ], - [ - "gene_synonym", - "NP_415584.1" - ], - [ - "gene_synonym", - "EcoGene:EG10851" - ], - [ - "gene_synonym", - "GI:16129029" - ], - [ - "gene_synonym", - "ASAP:ABE-0003622" - ], - [ - "gene_synonym", - "ECK1051" - ], - [ - "gene_synonym", - "rimJ" - ] - ], - "dna_sequence": "ATGTTTGGCTATCGCAGTAACGTGCCAAAAGTGCGCTTAACCACAGACCGACTGGTCGTGCGTCTGGTGCATGATCGTGATGCCTGGCGTCTTGCGGATTATTACGCAGAGAATCGCCATTTCCTCAAGCCCTGGGAGCCAGTGCGCGACGAAAGCCACTGTTATCCATCAGGCTGGCAGGCCAGGCTGGGGATGATTAACGAATTTCATAAACAAGGTTCAGCTTTCTACTTTGGCTTATTCGACCCGGACGAAAAAGAGATTATTGGCGTTGCCAATTTTTCCAATGTTGTTCGTGGCTCTTTTCATGCCTGCTATCTCGGTTATTCGATTGGGCAAAAATGGCAGGGCAAAGGACTCATGTTTGAAGCCCTGACCGCAGCCATTCGTTATATGCAGCGCACCCAACATATTCATCGCATTATGGCTAATTATATGCCGCACAATAAACGCAGCGGTGATTTACTGGCGCGACTGGGTTTTGAAAAAGAAGGCTATGCGAAAGACTATCTGTTGATTGATGGACAATGGCGCGATCACGTACTGACGGCATTAACTACCCCAGACTGGACGCCCGGCCGCTAA", - "dna_sequence_length": 585, - "functions": [ - "ribosomal-protein-S5-alanine N-acetyltransferase" - ], - "id": "CDS_1044", - "location": [ - [ - "NC_000913", - 1125562, - "+", - 585 - ] - ], - "md5": "2aab0e95d7b0a67cb99315772ebe375d", - "parent_gene": "", - "protein_md5": "868dc8d0c82e8d87ca65ae7849b70bb2", - "protein_translation": "MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSFHACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLGFEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR", - "protein_translation_length": 194, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945633" - ], - [ - "gene_synonym", - "b1067" - ], - [ - "gene_synonym", - "JW1054" - ], - [ - "gene_synonym", - "EcoGene:EG11537" - ], - [ - "gene_synonym", - "GI:16129030" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P29217" - ], - [ - "gene_synonym", - "yceH" - ], - [ - "gene_synonym", - "ASAP:ABE-0003625" - ], - [ - "gene_synonym", - "ECK1052" - ], - [ - "gene_synonym", - "NP_415585.1" - ] - ], - "dna_sequence": "ATGAAATATCAACTTACTGCCCTTGAAGCTCGCGTGATTGGTTGCTTGCTGGAAAAGCAGGTGACCACGCCGGAGCAATACCCGCTCTCAGTCAATGGTGTAGTCACGGCCTGTAATCAGAAAACGAACCGTGAACCGGTCATGAATCTGAGTGAATCCGAAGTGCAGGAACAGCTGGATAATCTGGTCAAACGTCATTATCTACGCACAGTGAGCGGTTTTGGTAATCGGGTCACCAAATATGAGCAACGTTTTTGTAATTCAGAATTTGGCGATCTGAAACTGAGCGCAGCGGAAGTGGCGTTAATCACCACGTTGTTATTGCGTGGTGCCCAGACGCCAGGTGAACTGCGCAGCCGCGCCGCGCGAATGTATGAATTCAGCGATATGGCGGAAGTGGAGTCGACGCTGGAACAACTGGCAAATCGCGAAGATGGTCCTTTTGTGGTGCGTCTGGCCCGCGAACCGGGTAAACGCGAAAACCGCTACATGCATCTTTTCAGTGGTGAGGTTGAAGATCAGCCGGCGGTGACGGATATGTCGAACGCGGTTGACGGTGATTTACAGGCCCGCGTCGAAGCCCTGGAAATCGAAGTGGCAGAACTGAAACAGCGTCTTGATTCGTTGCTGGCCCATCTGGGAGATTAA", - "dna_sequence_length": 648, - "functions": [ - "UPF0502 family protein" - ], - "id": "CDS_1045", - "location": [ - [ - "NC_000913", - 1126157, - "+", - 648 - ] - ], - "md5": "636f4ad0b6ebacd4109e136aa0d45dc9", - "parent_gene": "", - "protein_md5": "633709293862f3c6a04f8b8faf23d245", - "protein_translation": "MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRENRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD", - "protein_translation_length": 215, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415586.1" - ], - [ - "gene_synonym", - "GeneID:945204" - ], - [ - "gene_synonym", - "b1068" - ], - [ - "gene_synonym", - "mviM" - ], - [ - "gene_synonym", - "EcoGene:EG13879" - ], - [ - "gene_synonym", - "JW1055" - ], - [ - "gene_synonym", - "GI:16129031" - ], - [ - "gene_synonym", - "ASAP:ABE-0003627" - ], - [ - "gene_synonym", - "mviS" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75931" - ], - [ - "gene_synonym", - "yceM" - ], - [ - "gene_synonym", - "ECK1053" - ] - ], - "dna_sequence": "GTGAAAAAATTACGTATCGGCGTAGTGGGATTAGGTGGCATTGCGCAAAAAGCGTGGTTACCGGTGCTGGCGGCAGCGTCTGACTGGACGTTACAAGGAGCCTGGTCGCCTACGCGCGCGAAAGCCCTGCCAATTTGTGAAAGCTGGCGCATTCCTTATGCCGATTCGTTATCCAGCCTTGCCGCCAGTTGCGATGCGGTTTTTGTGCATTCCAGCACCGCCAGCCACTTTGACGTGGTCAGTACGTTACTCAATGCGGGGGTACATGTCTGTGTCGATAAACCGCTGGCAGAAAATCTGCGCGATGCTGAACGGCTGGTGGAACTGGCGGCGCGGAAAAAACTGACGTTGATGGTCGGTTTTAACCGTCGTTTCGCACCACTCTACGGTGAGTTAAAAACGCAACTCGCCACCGCAGCCTCGCTAAGAATGGATAAACATCGTAGCAATAGCGTCGGGCCACACGATCTTTATTTCACGTTGCTGGATGATTATCTGCATGTGGTGGATACCGCGCTGTGGTTGTCGGGCGGCAAAGCCTCTCTGGATGGCGGTACGCTACTGACTAACGACGCTGGCGAAATGCTGTTTGCCGAGCACCATTTTTCGGCTGGTCCTTTGCAGATCACCACCTGTATGCATCGCCGTGCCGGAAGTCAGCGTGAAACCGTGCAGGCCGTGACTGACGGTGCGCTCATCGACATTACGGATATGCGCGAATGGCGTGAGGAGCGCGGGCAGGGCGTAGTGCATAAACCGATTCCTGGTTGGCAGAGTACGCTTGAGCAACGTGGGTTTGTCGGCTGTGCGCGGCACTTCATTGAATGTGTGCAAAACCAGACAGTTCCGCAAACCGCCGGCGAACAGGCCGTGCTGGCGCAACGTATCGTTGACAAGATCTGGCGCGATGCGATGAGTGAATAA", - "dna_sequence_length": 924, - "functions": [ - "putative oxidoreductase" - ], - "id": "CDS_1046", - "location": [ - [ - "NC_000913", - 1126806, - "+", - 924 - ] - ], - "md5": "990892653a765c80615a072a3523cdda", - "parent_gene": "", - "protein_md5": "46e2689037ee8573b24e8d48069efef3", - "protein_translation": "MKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRFAPLYGELKTQLATAASLRMDKHRSNSVGPHDLYFTLLDDYLHVVDTALWLSGGKASLDGGTLLTNDAGEMLFAEHHFSAGPLQITTCMHRRAGSQRETVQAVTDGALIDITDMREWREERGQGVVHKPIPGWQSTLEQRGFVGCARHFIECVQNQTVPQTAGEQAVLAQRIVDKIWRDAMSE", - "protein_translation_length": 307, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "murJ" - ], - [ - "gene_synonym", - "mviN" - ], - [ - "gene_synonym", - "b1069" - ], - [ - "gene_synonym", - "EcoGene:EG13880" - ], - [ - "gene_synonym", - "GeneID:945487" - ], - [ - "gene_synonym", - "JW1056" - ], - [ - "gene_synonym", - "NP_415587.1" - ], - [ - "gene_synonym", - "GI:16129032" - ], - [ - "gene_synonym", - "ASAP:ABE-0003630" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF16" - ], - [ - "gene_synonym", - "ECK1054" - ], - [ - "gene_synonym", - "mviS" - ], - [ - "gene_synonym", - "yceN" - ] - ], - "dna_sequence": "ATGAATTTATTAAAATCGCTGGCCGCCGTCAGCTCGATGACCATGTTTTCGCGTGTGCTTGGCTTCGCACGAGACGCAATTGTCGCCAGAATCTTTGGCGCAGGGATGGCAACCGACGCCTTTTTCGTCGCTTTTAAACTTCCTAACTTGTTACGCCGTATCTTTGCCGAAGGGGCATTTTCCCAGGCATTTGTACCGATTCTGGCGGAATATAAAAGTAAGCAGGGTGAAGACGCCACGCGGGTCTTTGTCTCTTATGTTTCTGGCCTGCTGACACTTGCGCTGGCGGTTGTGACGGTCGCTGGCATGCTCGCCGCACCGTGGGTGATCATGGTGACCGCGCCAGGCTTCGCTGACACAGCTGACAAATTTGCCCTGACCAGCCAGCTACTAAAGATTACCTTTCCCTATATCTTGCTGATCTCCCTGGCGTCGCTGGTGGGAGCGATTCTGAATACGTGGAACCGCTTCTCGATTCCGGCGTTTGCTCCAACACTGCTTAACATCAGCATGATTGGTTTCGCGCTGTTTGCCGCACCGTACTTTAACCCACCGGTGCTGGCGCTGGCGTGGGCTGTTACGGTCGGCGGCGTCCTGCAGCTGGTGTATCAGCTACCGCACCTGAAGAAGATCGGCATGCTGGTCCTGCCGCGCATTAACTTCCACGATGCCGGAGCAATGCGCGTGGTGAAACAGATGGGACCGGCGATCCTTGGCGTCTCTGTGAGCCAGATCTCCTTAATCATCAACACCATTTTTGCCTCGTTTCTTGCTTCCGGTTCGGTGTCTTGGATGTATTACGCCGACCGCTTAATGGAGTTTCCGTCCGGTGTGCTGGGCGTGGCGCTTGGCACCATTTTGCTGCCGTCGCTGTCGAAAAGTTTTGCCAGTGGCAATCATGATGAATACAACCGTTTGATGGACTGGGGGTTGCGTCTTTGTTTCCTGTTGGCGCTGCCGAGTGCGGTTGCGTTGGGCATTCTTTCCGGTCCGTTGACCGTTTCGCTGTTCCAGTACGGTAAATTTACCGCGTTTGATGCGCTGATGACCCAGCGGGCGTTAATTGCCTACTCGGTGGGTTTGATTGGCCTGATTGTAGTGAAAGTGTTGGCTCCTGGCTTTTATTCCCGCCAGGACATTAAAACGCCAGTGAAAATTGCCATCGTTACGCTGATTTTAACGCAATTGATGAACCTGGCGTTTATTGGTCCGTTGAAACATGCCGGGCTGTCACTTTCTATTGGTCTGGCGGCGTGTCTGAATGCTTCGCTGCTTTACTGGCAGTTGCGTAAGCAGAAAATCTTTACCCCGCAACCCGGCTGGATGGCGTTTCTGTTGCGTCTGGTGGTGGCGGTACTGGTGATGTCTGGCGTGCTTTTAGGTATGTTACATATCATGCCGGAGTGGTCATTGGGTACCATGCCCTGGCGTTTACTGCGTTTAATGGCGGTCGTGCTGGCGGGGATTGCCGCGTACTTCGCTGCACTGGCGGTACTGGGCTTCAAAGTTAAAGAATTTGCCCGCCGGACGGTGTAA", 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[ - "gene_synonym", - "JW1057" - ], - [ - "gene_synonym", - "b1070" - ], - [ - "gene_synonym", - "GI:16129033" - ], - [ - "gene_synonym", - "ASAP:ABE-0003632" - ], - [ - "gene_synonym", - "ECK1055" - ], - [ - "gene_synonym", - "GeneID:945634" - ], - [ - "gene_synonym", - "flgN" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P43533" - ] - ], - "dna_sequence": "ATGACACGTCTTGCAGAGATCCTCGACCAGATGTCCGCTGTGCTTAACGATCTCAAAACGGTAATGGATCAAGAGCAGCAACATCTCTCTATGGGGCAGATCAACGGCAGCCAGTTGCAATGGATTACAGAACAAAAAAGCTCACTGCTGGCGACGCTGGATTACCTCGAACAGTTACGCAGGAAAGAACCCAATACAGCAAATAGCGTTGATATTAGTCAACGCTGGCAGGAAATTACTGTGAAAACGCAGCAACTACGCCAAATGAATCAACATAACGGCTGGTTACTGGAAGGACAGATTGAGCGCAATCAACAGGCGCTGGAAATGTTGAAACCGCATCAGGAACCGACGCTATATGGGGCGAACGGTCAGACCTCAACAACCCATCGCGGCGGTAAAAAGATTTCGATCTGA", - "dna_sequence_length": 417, - "functions": [ - "export chaperone for FlgK and FlgL" - ], - "id": "CDS_1048", - "location": [ - [ - "NC_000913", - 1129830, - "-", - 417 - ] - ], - "md5": "6dee993b8abd6ebfb3dfbe1fba5c5ca1", - "parent_gene": "", - "protein_md5": "3ef9c0c48a0d3fc5b259b914cd6bf04d", - "protein_translation": "MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITEQKSSLLATLDYLEQLRRKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQIERNQQALEMLKPHQEPTLYGANGQTSTTHRGGKKISI", - "protein_translation_length": 138, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1058" - ], - [ - "gene_synonym", - "EcoGene:EG12664" - ], - [ - "gene_synonym", - "GeneID:946684" - ], - [ - "gene_synonym", - "b1071" - ], - [ - "gene_synonym", - "ASAP:ABE-0003634" - ], - [ - "gene_synonym", - "NP_415589.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEM4" - ], - [ - "gene_synonym", - "GI:16129034" - ], - [ - "gene_synonym", - "mviS" - ], - [ - "gene_synonym", - "ECK1056" - ], - [ - "gene_synonym", - "flgM" - ] - ], - "dna_sequence": "ATGAGTATTGATCGCACTTCGCCTCTGAAGCCTGTAAGCACCGTTCAACCGCGCGAAACCACTGACGCGCCGGTAACGAACAGCCGGGCGGCAAAAACAACCGCCTCCACCAGCACCAGTGTGACGTTAAGCGACGCGCAAGCAAAACTGATGCAACCCGGCAGCAGTGATATCAATCTTGAACGTGTCGAAGCGTTAAAACTGGCGATTCGTAACGGTGAACTAAAAATGGACACCGGCAAAATTGCCGATGCGCTGATCAACGAAGCGCAGCAAGACTTGCAGAGTAACTGA", - "dna_sequence_length": 294, - "functions": [ - "anti-sigma factor for FliA (sigma 28)" - ], - "id": "CDS_1049", - "location": [ - [ - "NC_000913", - 1130128, - "-", - 294 - ] - ], - "md5": "ca2fca44ccba078e031f1b9ad84b6d5e", - "parent_gene": "", - "protein_md5": "a02cc5ce5986d9f93702d587a076bf74", - "protein_translation": "MSIDRTSPLKPVSTVQPRETTDAPVTNSRAAKTTASTSTSVTLSDAQAKLMQPGSSDINLERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN", - "protein_translation_length": 97, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "flaU" - ], - [ - "gene_synonym", - "JW1059" - ], - [ - "gene_synonym", - "GeneID:946300" - ], - [ - "gene_synonym", - "b1072" - ], - [ - "gene_synonym", - "EcoGene:EG20263" - ], - [ - "gene_synonym", - "ASAP:ABE-0003637" - ], - [ - "gene_synonym", - "flgA" - ], - [ - "gene_synonym", - "NP_415590.1" - ], - [ - "gene_synonym", - "GI:16129035" - ], - [ - "gene_synonym", - "ECK1057" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75933" - ] - ], - "dna_sequence": "ATGCTGATAATAAAACGTAGCGTGGCGATCATCGCGATACTGTTCAGTCCGTTAAGTACGGCGAGCAATCTCACATCGCAATTGCACAACTTTTTTAGCGCCCAACTCGCGGGGGTAAGTGATGAGGTTCGTGTTTCTATTCGTACAGCGCCCAATCTACTACCGCCATGCGAGCAGCCATTGCTTTCGATGAGCAATAATTCCCGCCTGTGGGGCAATGTGAATGTGTTGGCACGCTGCGGTAACGACAAACGATATTTACAGGTTAATGTACAGGCCACAGGAAATTATGTGGTTGCCGCGATGCCCATTGCGCGGGGAGGAAAGCTGGAAGCTGGCAATGTCAAACTGAAACGCGGACGGCTGGATACCCTGCCACCGCGTACGGTGCTGGATATCAATCAACTTGTTGATGCCATTAGCCTGCGCGATCTATCACCCGATCAACCTATCCAGTTAACCCAGTTTCGCCAGGCATGGCGGGTAAAAGCGGGACAACGCGTCAATGTGATCGCCAGCGGTGATGGGTTTAGCGCCAACGCAGAAGGTCAGGCGCTGAACAATGCAGCCGTCGCACAGAATGCGCGGGTGCGCATGGTATCGGGACAGGTAGTCAGCGGCGTTGTTGATGCAGATGGGAATATTCTTATAAACCTGTAA", - "dna_sequence_length": 660, - "functions": [ - "assembly protein for flagellar basal-body periplasmic P ring" - ], - "id": "CDS_1050", - "location": [ - [ - "NC_000913", - 1130863, - "-", - 660 - ] - ], - "md5": "717f4cbaa4a43d6241aa4603100906bc", - "parent_gene": "", - "protein_md5": "038013067a4259ba701397125f92a597", - "protein_translation": "MLIIKRSVAIIAILFSPLSTASNLTSQLHNFFSAQLAGVSDEVRVSIRTAPNLLPPCEQPLLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAMPIARGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTQFRQAWRVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARVRMVSGQVVSGVVDADGNILINL", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABW9" - ], - [ - "gene_synonym", - "JW1060" - ], - [ - "gene_synonym", - "NP_415591.1" - ], - [ - "gene_synonym", - "GeneID:945678" - ], - [ - "gene_synonym", - "flbA" - ], - [ - "gene_synonym", - "b1073" - ], - [ - "gene_synonym", - "flgB" - ], - [ - "gene_synonym", - "ECK1058" - ], - [ - "gene_synonym", - "GI:16129036" - ], - [ - "gene_synonym", - "EcoGene:EG14266" - ], - [ - "gene_synonym", - "ASAP:ABE-0003641" - ] - ], - "dna_sequence": "ATGCTCGATAAGCTCGACGCCGCCTTACGTTTTCAACAAGAGGCGCTCAATCTGCGCGCCCAGCGTCAGGAAGTGCTGGCAGCAAACATCGCCAATGCCGATACCCCTGGTTATCAGGCGCGCGATATCGATTTTGCCAGTGAACTTAAAAAAGTCATGCAACGTGGACGGGATGCAACCAGTGTGGTTGCACTGACGATGACCTCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACAGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGCATGATGAACGTTTTACAGAGCGGAAATTAA", - "dna_sequence_length": 417, - "functions": [ - "flagellar component of cell-proximal portion of basal-body rod" - ], - "id": "CDS_1051", - "location": [ - [ - "NC_000913", - 1131018, - "+", - 417 - ] - ], - "md5": "123f74c8264937c133e5a45116bcd7ad", - "parent_gene": "", - "protein_md5": "3e8d86b7a557f5f3957a7efcc60aeb06", - "protein_translation": "MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTPGYQARDIDFASELKKVMQRGRDATSVVALTMTSTQHIPAQALTPPTAELQYRIPDQPSLDGNTVDMDRERTQFADNSLQYQMSLSALSGQIKGMMNVLQSGN", - "protein_translation_length": 138, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "flaW" - ], - [ - "gene_synonym", - "JW1061" - ], - [ - "gene_synonym", - "NP_415592.1" - ], - [ - "gene_synonym", - "b1074" - ], - [ - "gene_synonym", - "GeneID:946687" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABX2" - ], - [ - "gene_synonym", - "flgC" - ], - [ - "gene_synonym", - "GI:16129037" - ], - [ - "gene_synonym", - "ECK1059" - ], - [ - "gene_synonym", - "EcoGene:EG14267" - ], - [ - "gene_synonym", - "ASAP:ABE-0003643" - ] - ], - "dna_sequence": "ATGGCACTGCTGAATATTTTTGATATCGCCGGGTCGGCGTTAACTGCCCAGTCCCAGCGCCTGAACGTGGCGGCCAGTAATCTGGCGAATGCTGATAGCGTGACCGGTCCCGATGGACAGCCATATCGGGCAAAACAGGTGGTATTCCAGGTTAACGCTGCACCAGGTGCTGCGACAGGCGGCGTAAAGGTTGCCGATGTTATAGAAAGTCAGGCCCCGGACAAACTGGTTTATGAACCGGGTAATCCGCTGGCAGATGCAAAGGGCTACGTAAAAATGCCGAACGTTGATGTTGTCGGAGAGATGGTTAACACCATGTCGGCGTCACGCAGCTATCAGGCCAATGTTGAAGTGCTCAACACGGTGAAAAGCATGATGCTGAAAACCCTTACGCTCGGTCAATAA", - "dna_sequence_length": 405, - "functions": [ - "flagellar component of cell-proximal portion of basal-body rod" - ], - "id": "CDS_1052", - "location": [ - [ - "NC_000913", - 1131438, - "+", - 405 - ] - ], - "md5": "7917ac80ba8bdb8a53fc3cab32a49fd7", - "parent_gene": "", - "protein_md5": "18a635cda0910181c6ca37d44a0e261a", - "protein_translation": "MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRAKQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEMVNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ", - "protein_translation_length": 134, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1062" - ], - [ - "gene_synonym", - "GeneID:945813" - ], - [ - "gene_synonym", - "flaV" - ], - [ - "gene_synonym", - "b1075" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75936" - ], - [ - "gene_synonym", - "flgD" - ], - [ - "gene_synonym", - "EcoGene:EG14268" - ], - [ - "gene_synonym", - "ECK1060" - ], - [ - "gene_synonym", - "NP_415593.1" - ], - [ - "gene_synonym", - "GI:16129038" - ], - [ - "gene_synonym", - "ASAP:ABE-0003645" - ] - ], - "dna_sequence": "ATGTCCATTGCGGTAACCACCACCGATCCGACAAATACCGGCGTCAGTACCACCAGCAGTAGTTCGCTCACGGGCAGCAACGCCGCAGATTTACAAAGCAGTTTTCTGACTTTGCTGGTGGCGCAGCTGAAAAACCAGGACCCGACCAATCCAATGGAAAACAACGAGCTGACGTCGCAATTGGCACAAATCAGCACGGTCAGCGGGATTGAAAAACTCAATACCACGCTCGGATCTATTTCCGGACAGATTGATAACAGCCAGTCGTTACAGGCCAGTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGCAGTGAAGAAGGGGCTGTGACCACGACCACGCCGTTTGGTGTTGAGCTGCAACAGGCGGCAGACAAAGTTACGGCCACCATCACCGATAAAAATGGCGCGGTTGTGCGCACCATTGATATTGGTGAACTGACCGCCGGAGTTCACAGTTTCACCTGGGACGGTACGTTGACTGATGGCAGCACTGCGCCGAACGGTTCTTACAATGTAGCGATTAGCGCCAGTAACGGTGGTACACAACTGGTTGCCCAGCCGCTGCAGTTTGCTCTGGTGCAGGGTGTGATCCGCGGCAACAGCGGTAATACGCTGGATCTCGGCACTTACGGCACCACCACCCTCGACGAAGTACGGCAGATAATTTAA", - "dna_sequence_length": 696, - "functions": [ - "flagellar hook assembly protein" - ], - "id": "CDS_1053", - "location": [ - [ - "NC_000913", - 1131854, - "+", - 696 - ] - ], - "md5": "5c1e875190657bf5dc9dcffcc6724b01", - "parent_gene": "", - "protein_md5": "08037d530361a949c1ac4ce9da07c9c6", - "protein_translation": "MSIAVTTTDPTNTGVSTTSSSSLTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSGIEKLNTTLGSISGQIDNSQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADKVTATITDKNGAVVRTIDIGELTAGVHSFTWDGTLTDGSTAPNGSYNVAISASNGGTQLVAQPLQFALVQGVIRGNSGNTLDLGTYGTTTLDEVRQII", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1063" - ], - [ - "gene_synonym", - "b1076" - ], - [ - "gene_synonym", - "NP_415594.1" - ], - [ - "gene_synonym", - "GeneID:945636" - ], - [ - "gene_synonym", - "flgE" - ], - [ - "gene_synonym", - "ECK1061" - ], - [ - "gene_synonym", - "EcoGene:EG14269" - ], - [ - "gene_synonym", - "GI:16129039" - ], - [ - "gene_synonym", - "ASAP:ABE-0003647" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75937" - ], - [ - "gene_synonym", - "flaK" - ] - ], - "dna_sequence": "ATGGCCTTTTCTCAAGCGGTTAGCGGATTAAACGCTGCCGCCACCAACCTCGATGTTATTGGCAACAATATCGCCAACTCCGCCACCTACGGCTTTAAATCAGGCACGGCCTCTTTTGCCGATATGTTTGCCGGTTCGAAAGTGGGACTGGGGGTAAAAGTTGCCGGTATCACTCAGGACTTTACCGATGGCACGACCACCAACACCGGGCGAGGTCTGGACGTTGCTATCAGCCAGAACGGTTTTTTCCGTCTGGTAGACAGCAACGGTTCGGTGTTCTACAGCCGTAACGGACAATTTAAGCTGGATGAAAACCGTAACCTGGTGAATATGCAAGGTTTACAGCTGACGGGTTACCCGGCAACCGGTACGCCGCCGACTATTCAGCAAGGGGCGAATCCGACCAATATTTCGATCCCGAATACCCTGATGGCAGCGAAAACTACCACCACGGCATCGATGCAGATCAACCTGAATTCCAGTGATCCGCTTCCTACTGTTACGCCATTCAGCGCCAGCAATGCGGATAGCTATAACAAAAAAGGTTCGGTGACTGTTTTCGACAGTCAGGGTAATGCTCATGACATGAGCGTCTACTTTGTGAAGACCGGGGATAATAACTGGCAGGTCTACACCCAGGATAGCAGTGATCCAAACAGCATTGCGAAGACAGCGACAACACTGGAATTTAATGCTAATGGCACATTAGTGGATGGTGCGATGGCGAATAATATCGCAACCGGCGCAATTAACGGTGCAGAACCCGCCACGTTTAGTCTGAGCTTCCTCAACTCCATGCAGCAAAATACCGGCGCTAACAATATTGTGGCAACCACCCAGAACGGCTACAAACCGGGCGATCTGGTGAGTTATCAAATCAATGATGACGGTACGGTTGTCGGCAACTATTCCAACGAACAAACCCAACTGCTGGGGCAGATTGTACTGGCGAACTTTGCCAACAACGAAGGTCTGGCATCCGAAGGCGACAACGTCTGGTCTGCGACGCAATCTTCTGGCGTGGCGCTGTTGGGGACAGCCGGGACGGGAAACTTTGGCACCCTGACCAACGGTGCGCTGGAAGCGTCCAACGTCGATCTCAGTAAAGAACTGGTCAATATGATCGTTGCCCAGCGTAACTATCAGTCTAACGCCCAGACCATCAAAACCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTAA", - "dna_sequence_length": 1209, - "functions": [ - "flagellar hook protein" - ], - "id": "CDS_1054", - "location": [ - [ - "NC_000913", - 1132574, - "+", - 1209 - ] - ], - "md5": "80c0631e86676409d57f9c6d34792520", - "parent_gene": "", - "protein_md5": "301d9eb9242556c6164f2bcbeb1fa61f", - "protein_translation": "MAFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAGSKVGLGVKVAGITQDFTDGTTTNTGRGLDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGLQLTGYPATGTPPTIQQGANPTNISIPNTLMAAKTTTTASMQINLNSSDPLPTVTPFSASNADSYNKKGSVTVFDSQGNAHDMSVYFVKTGDNNWQVYTQDSSDPNSIAKTATTLEFNANGTLVDGAMANNIATGAINGAEPATFSLSFLNSMQQNTGANNIVATTQNGYKPGDLVSYQINDDGTVVGNYSNEQTQLLGQIVLANFANNEGLASEGDNVWSATQSSGVALLGTAGTGNFGTLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQILNTLVNLR", - "protein_translation_length": 402, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129040" - ], - [ - "gene_synonym", - "JW1064" - ], - [ - "gene_synonym", - "b1077" - ], - [ - "gene_synonym", - "flaX" - ], - [ - "gene_synonym", - "GeneID:945639" - ], - [ - "gene_synonym", - "EcoGene:EG14270" - ], - [ - "gene_synonym", - "NP_415595.1" - ], - [ - "gene_synonym", - "flgF" - ], - [ - "gene_synonym", - "ASAP:ABE-0003649" - ], - [ - "gene_synonym", - "ECK1062" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75938" - ] - ], - "dna_sequence": "ATGGATCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACACTGAATCAACAGGCGGTAACCGCCAGTAATCTGGCCAATGCCTCAACGCCCGGTTTTCGCGCGCAGTTGAATGCTTTACGCGCGGTGCCAGTGGAAGGGCTTTCTCTGCCCACGCGCACGTTGGTCACGGCGTCAACGCCGGGCGCAGATATGACGCCCGGCAAAATGGATTACACCTCGCGCCCGCTGGACGTCGCGTTGCAGCAGGATGGCTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCAGGTTGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCTGGGCCAATTGCTGTGCCGGAAGGGGCGGAAATCACTATTGCTGCCGATGGCACAATCTCGGCGCTCAATCCGGGCGATCCGGCAAATACGGTTGCGCCAGTAGGGCGTCTTAAACTGGTGAAAGCCACGGGCAGCGAAGTGCAGCGCGGTGACGACGGCATTTTTCGTTTAAGCGCAGAAACCCAGGCCACGCGTGGGCCGGTACTGCAGGCAGATCCAACCTTGCGTGTGATGTCGGGGGTTCTGGAAGGCAGTAACGTCAATGCCGTTGCGGCAATGAGCGACATGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAACGCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAA", - "dna_sequence_length": 756, - "functions": [ - "flagellar component of cell-proximal portion of basal-body rod" - ], - "id": "CDS_1055", - "location": [ - [ - "NC_000913", - 1133802, - "+", - 756 - ] - ], - "md5": "5a8276998cb91d482436437b8009eecf", - "parent_gene": "", - "protein_md5": "7094f4fdab69cee2c4307a73117a0697", - "protein_translation": "MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTASTPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQLTIQGHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDNAGRANQLLSMS", - "protein_translation_length": 251, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415596.1" - ], - [ - "gene_synonym", - "b1078" - ], - [ - "gene_synonym", - "JW1065" - ], - [ - "gene_synonym", - "GeneID:945647" - ], - [ - "gene_synonym", - "GI:16129041" - ], - [ - "gene_synonym", - "EcoGene:EG14271" - ], - [ - "gene_synonym", - "flgG" - ], - [ - "gene_synonym", - "flaL" - ], - [ - "gene_synonym", - "ECK1063" - ], - [ - "gene_synonym", - "ASAP:ABE-0003652" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABX5" - ] - ], - "dna_sequence": "ATGATCAGTTCATTATGGATCGCCAAAACGGGCCTTGACGCCCAGCAAACCAATATGGACGTCATTGCCAACAACCTGGCAAACGTCAGTACTAACGGTTTTAAGCGTCAGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTTTTCCAGGTGATGTTGCCAGATGGTTCATCAGCCTATACCCGTGACGGCTCTTTCCAGGTGGATCAGAACGGGCAGCTGGTGACGGCTGGTGGTTTTCAGGTGCAGCCAGCGATCACCATTCCGGCGAATGCGTTAAGTATCACCATCGGTCGTGATGGCGTGGTCAGCGTAACCCAACAAGGCCAGGCAGCTCCGGTTCAGGTTGGGCAGCTCAATCTCACCACCTTTATGAATGACACCGGGCTGGAGAGCATTGGCGAAAACCTCTACACCGAAACGCAATCCTCTGGTGCACCGAACGAAAGCACGCCGGGCCTGAACGGCGCGGGACTGCTGTATCAAGGGTATGTTGAAACGTCTAACGTCAACGTGGCGGAAGAACTGGTCAATATGATTCAGGTGCAACGCGCTTACGAAATCAACAGTAAAGCGGTGTCCACCACCGATCAGATGCTGCAAAAACTGACGCAACTCTAA", - "dna_sequence_length": 783, - "functions": [ - "flagellar component of cell-distal portion of basal-body rod" - ], - "id": "CDS_1056", - "location": [ - [ - "NC_000913", - 1134729, - "+", - 783 - ] - ], - "md5": "190f0aa8c01812403d9f8e2ba5f6d9f2", - "parent_gene": "", - "protein_md5": "d5bb5ca9c52fff494b56f4dc20ba61ee", - "protein_translation": "MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL", - "protein_translation_length": 260, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6S0" - ], - [ - "gene_synonym", - "GeneID:946996" - ], - [ - "gene_synonym", - "b1079" - ], - [ - "gene_synonym", - "NP_415597.1" - ], - [ - "gene_synonym", - "flaY" - ], - [ - "gene_synonym", - "EcoGene:EG20264" - ], - [ - "gene_synonym", - "ASAP:ABE-0003654" - ], - [ - "gene_synonym", - "JW5153" - ], - [ - "gene_synonym", - "flgH" - ], - [ - "gene_synonym", - "GI:16129042" - ], - [ - "gene_synonym", - "ECK1064" - ] - ], - "dna_sequence": "ATGCAAAAAAACGCTGCGCATACTTATGCCATTTCCAGCTTGTTGGTGCTTTCACTAACCGGCTGCGCCTGGATACCCTCCACGCCGCTGGTGCAGGGGGCGACCAGTGCACAACCGGTTCCCGGTCCGACGCCCGTCGCCAACGGTTCTATTTTCCAGTCTGCTCAGCCGATTAACTATGGCTATCAACCGCTGTTTGAAGATCGTCGACCACGCAATATTGGCGATACGCTGACCATCGTGTTGCAGGAGAACGTCAGCGCCAGCAAAAGCTCCTCTGCGAATGCCAGCCGTGACGGTAAAACTAATTTTGGCTTTGATACTGTGCCGCGCTATTTGCAGGGGCTGTTTGGTAACGCTCGTGCCGATGTCGAAGCCTCCGGTGGTAACACGTTCAACGGAAAGGGCGGGGCCAATGCCAGCAATACCTTTAGCGGCACGTTGACGGTGACGGTTGACCAGGTACTGGTCAACGGCAACCTGCATGTGGTGGGTGAAAAACAGATTGCCATTAATCAGGGTACCGAATTTATTCGCTTCTCTGGCGTGGTTAATCCACGCACTATCAGCGGCAGCAATACCGTACCGTCTACTCAGGTGGCGGATGCGCGCATTGAATACGTAGGCAATGGCTACATTAACGAAGCGCAAAATATGGGCTGGTTGCAGCGTTTCTTCCTTAACCTGTCGCCAATGTAA", - "dna_sequence_length": 699, - "functions": [ - "flagellar protein of basal-body outer-membrane L ring" - ], - "id": "CDS_1057", - "location": [ - [ - "NC_000913", - 1135564, - "+", - 699 - ] - ], - "md5": "9acf47e11b04f8e5d8d4225093c7bc91", - "parent_gene": "", - "protein_md5": "3ea45bf91377644637e3d465a8ecb854", - "protein_translation": "MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPTPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKTNFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM", - "protein_translation_length": 232, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1080" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6S3" - ], - [ - "gene_synonym", - "JW1067" - ], - [ - "gene_synonym", - "GeneID:947534" - ], - [ - "gene_synonym", - "NP_415598.3" - ], - [ - "gene_synonym", - "GI:49176076" - ], - [ - "gene_synonym", - "EcoGene:EG20265" - ], - [ - "gene_synonym", - "flaM" - ], - [ - "gene_synonym", - "flgI" - ], - [ - "gene_synonym", - "ECK1065" - ], - [ - "gene_synonym", - "ASAP:ABE-0003656" - ] - ], - "dna_sequence": "GTGATTAAATTTCTCTCTGCATTAATTCTTCTACTGGTCACGACGGCGGCTCAGGCTGAGCGTATTCGCGATCTCACCAGTGTTCAGGGGGTAAGGCAAAACTCACTGATTGGCTATGGTCTGGTGGTGGGGCTGGATGGCACCGGTGACCAGACAACCCAGACGCCGTTTACCACACAAACGCTTAATAACATGCTCTCACAGCTGGGAATTACCGTTCCGACGGGCACCAATATGCAGCTAAAAAACGTCGCTGCGGTAATGGTGACAGCGTCACTTCCTCCGTTTGGACGTCAGGGGCAAACCATCGATGTGGTGGTTTCTTCCATGGGAAATGCCAAAAGCTTGCGTGGAGGTACGTTGTTGATGACACCGCTTAAGGGCGTTGACAGTCAGGTGTATGCGCTGGCGCAGGGCAATATTCTGGTTGGCGGCGCAGGAGCCTCCGCTGGCGGTAGCAGTGTTCAGGTTAACCAACTGAACGGTGGACGGATCACCAATGGTGCGGTTATTGAACGTGAATTGCCCAGCCAGTTTGGCGTCGGGAATACCCTTAATTTGCAACTTAACGACGAAGATTTCAGCATGGCGCAGCAAATCGCTGACACCATCAACCGCGTGCGTGGATATGGCAGCGCCACCGCGTTAGATGCGCGGACTATTCAGGTGCGCGTACCGAGTGGCAACAGTTCCCAGGTCCGCTTCCTTGCCGATATTCAGAATATGCAGGTTAATGTCACCCCGCAGGACGCTAAAGTAGTGATTAACTCGCGCACCGGTTCGGTGGTGATGAATCGCGAAGTGACCCTCGACAGCTGCGCGGTAGCGCAGGGGAATCTCTCAGTAACAGTTAATCGTCAGGCCAATGTCAGCCAGCCAGATACACCGTTTGGTGGTGGACAGACTGTGGTTACTCCACAAACGCAGATCGATTTACGCCAGAGCGGCGGTTCGCTGCAAAGCGTACGTTCCAGCGCCAGCCTCAATAACGTGGTGCGCGCGCTCAATGCGCTGGGCGCTACGCCGATGGATCTGATGTCCATACTGCAATCAATGCAAAGTGCGGGATGTCTGCGGGCAAAACTGGAAATCATCTGA", - "dna_sequence_length": 1098, - "functions": [ - "putative flagellar basal body protein" - ], - "id": "CDS_1058", - "location": [ - [ - "NC_000913", - 1136274, - "+", - 1098 - ] - ], - "md5": "880cacc07960780752eea0f7819f1865", - "parent_gene": "", - "protein_md5": "aefe099728db0e163b2fde586b6afe8f", - "protein_translation": "MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVGLDGTGDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQTIDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQLNGGRITNGAVIERELPSQFGVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDARTIQVRVPSGNSSQVRFLADIQNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVAQGNLSVTVNRQANVSQPDTPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRALNALGATPMDLMSILQSMQSAGCLRAKLEII", - "protein_translation_length": 365, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415599.1" - ], - [ - "gene_synonym", - "b1081" - ], - [ - "gene_synonym", - "GI:16129044" - ], - [ - "gene_synonym", - "GeneID:947456" - ], - [ - "gene_synonym", - "JW1068" - ], - [ - "gene_synonym", - "flaZ" - ], - [ - "gene_synonym", - "EcoGene:EG14272" - ], - [ - "gene_synonym", - "ASAP:ABE-0003658" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75942" - ], - [ - "gene_synonym", - "flgJ" - ], - [ - "gene_synonym", - "ECK1066" - ] - ], - "dna_sequence": "ATGATCAGCGACAGCAAACTACTGGCAAGTGCGGCCTGGGATGCGCAATCACTCAACGAACTAAAGGCGAAAGCGGGCGAAGATCCGGCGGCAAATATCCGTCCGGTGGCCCGTCAGGTGGAAGGGATGTTCGTGCAGATGATGTTGAAAAGCATGCGCGACGCTTTACCAAAAGATGGCCTGTTCAGCAGCGAGCACACTCGCCTGTATACCAGTATGTATGACCAGCAGATTGCCCAACAGATGACGGCGGGCAAAGGTCTGGGGCTTGCAGAGATGATGGTTAAACAGATGACGCCAGAACAACCATTGCCAGAGGAGTCCACGCCAGCAGCACCGATGAAATTCCCGCTCGAAACTGTGGTGCGTTATCAAAATCAGGCGCTTTCGCAGCTGGTGCAAAAGGCCGTGCCACGTAACTACGATGATTCGCTGCCGGGTGACAGTAAAGCATTCCTCGCGCAACTCTCGCTGCCCGCCCAACTGGCAAGCCAGCAAAGCGGTGTGCCACATCATTTGATCCTCGCTCAGGCGGCACTGGAATCTGGTTGGGGGCAACGGCAAATCCGCCGCGAAAACGGCGAGCCGAGCTATAACCTGTTTGGTGTCAAAGCCTCTGGCAACTGGAAAGGGCCAGTTACTGAAATCACCACGACTGAATATGAAAACGGCGAAGCGAAGAAAGTAAAAGCGAAGTTTCGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCGACAAGGTGAGCAAAACCTACAGTATGAACATTGATAATCTGTTCTGA", - "dna_sequence_length": 942, - "functions": [ - "flagellar rod assembly protein and murein hydrolase", - "flagellum-specific muramidase" - ], - "id": "CDS_1059", - "location": [ - [ - "NC_000913", - 1137371, - "+", - 942 - ] - ], - "md5": "c1592b22f9b91f33cf7f27099188aa51", - "parent_gene": "", - "protein_md5": "54abc19c1f181230004e3c23443d7c6a", - "protein_translation": "MISDSKLLASAAWDAQSLNELKAKAGEDPAANIRPVARQVEGMFVQMMLKSMRDALPKDGLFSSEHTRLYTSMYDQQIAQQMTAGKGLGLAEMMVKQMTPEQPLPEESTPAAPMKFPLETVVRYQNQALSQLVQKAVPRNYDDSLPGDSKAFLAQLSLPAQLASQQSGVPHHLILAQAALESGWGQRQIRRENGEPSYNLFGVKASGNWKGPVTEITTTEYENGEAKKVKAKFRVYSSYLEALSDYVGLLTRNPRYAAVTTAASAEQGAQALQDAGYATDPHYARKLTNMIQQMKSISDKVSKTYSMNIDNLF", - "protein_translation_length": 313, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1082" - ], - [ - "gene_synonym", - "GI:16129045" - ], - [ - "gene_synonym", - "ASAP:ABE-0003660" - ], - [ - "gene_synonym", - "flaS" - ], - [ - "gene_synonym", - "JW1069" - ], - [ - "gene_synonym", - "EcoGene:EG11967" - ], - [ - "gene_synonym", - "flgK" - ], - [ - "gene_synonym", - "NP_415600.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33235" - ], - [ - "gene_synonym", - "ECK1067" - ], - [ - "gene_synonym", - "GeneID:945648" - ] - ], - "dna_sequence": "ATGTCCAGCTTGATTAATAACGCCATGAGCGGACTGAACGCGGCCCAGGCGGCGTTAAATACGGCAAGTAATAATATCTCCAGCTATAACGTTGCCGGATATACCCGCCAAACCACTATTATGGCGCAGGCCAATAGCACGTTGGGCGCTGGCGGCTGGGTTGGCAATGGTGTCTACGTTTCTGGTGTGCAGCGTGAGTATGATGCGTTTATTACCAACCAGTTACGTGCGGCGCAGACGCAAAGTAGCGGTCTGACTGCCCGCTATGAGCAGATGTCGAAAATCGACAATATGCTCTCCACCAGTACCTCTTCGCTGGCAACACAGATGCAGGATTTCTTCACCAGCCTGCAAACGCTGGTGAGTAACGCGGAAGACCCGGCAGCGCGCCAGGCGCTGATTGGGAAATCAGAAGGATTGGTGAATCAGTTTAAAACCACCGATCAATATCTGCGCGACCAGGACAAACAGGTCAATATCGCGATAGGTGCCAGCGTTGATCAGATCAACAACTACGCTAAACAAATTGCCAGCCTGAACGATCAAATCTCGCGCCTGACAGGCGTGGGGGCAGGGGCGTCACCTAACAATCTGCTGGATCAACGCGATCAACTGGTGAGCGAATTAAACCAGATTGTTGGTGTAGAAGTCAGCGTTCAGGATGGCGGCACTTATAACATCACGATGGCCAATGGTTACTCACTGGTTCAGGGAAGTACGGCGCGGCAACTGGCGGCAGTTCCTTCCAGCGCTGACCCTTCTCGTACGACTGTCGCTTATGTTGATGGGACGGCAGGCAATATTGAGATCCCGGAGAAATTACTGAATACCGGGTCGCTGGGCGGCATTCTGACATTCCGTTCTCAGGATCTGGACCAGACGCGTAATACGCTTGGACAACTGGCGCTGGCATTTGCCGAGGCTTTCAACACCCAACACAAAGCCGGATTTGATGCTAACGGCGATGCCGGTGAAGATTTCTTTGCTATCGGTAAGCCCGCGGTTCTGCAAAACACGAAAAACAAAGGTGACGTTGCGATCGGTGCCACGGTAACTGATGCCTCCGCGGTACTGGCGACAGATTACAAAATCTCGTTCGATAATAATCAGTGGCAGGTCACCCGCCTTGCCAGCAATACCACTTTTACGGTGACGCCGGATGCCAACGGTAAAGTGGCATTTGATGGTCTGGAGTTGACGTTTACAGGAACGCCTGCCGTTAACGACAGCTTCACGCTGAAACCAGTAAGTGACGCCATCGTCAACATGGATGTATTAATCACCGACGAAGCGAAAATAGCGATGGCGAGCGAAGAAGATGCGGGTGATAGCGATAACCGCAACGGTCAGGCCCTGCTGGATCTGCAAAGCAACAGTAAAACGGTGGGCGGTGCGAAATCCTTTAACGACGCTTATGCCTCGTTAGTGAGTGATATCGGTAATAAAACCGCGACGTTGAAAACCAGTAGCGCCACGCAAGGTAATGTGGTGACGCAGCTTTCCAATCAGCAGCAGTCGATTTCCGGTGTCAATCTCGATGAGGAGTACGGAAATCTGCAACGTTTTCAGCAGTATTACCTGGCGAATGCGCAGGTTCTGCAGACGGCAAACGCGATTTTTGATGCGCTGATTAACATTCGCTAA", - "dna_sequence_length": 1644, - "functions": [ - "flagellar hook-filament junction protein 1" - ], - "id": "CDS_1060", - "location": [ - [ - "NC_000913", - 1138378, - "+", - 1644 - ] - ], - "md5": "a6e2f8dee9801127bd96011877da71c0", - "parent_gene": "", - "protein_md5": "20cfdd7fda7c0816078c40680a78ed55", - "protein_translation": "MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIAIGASVDQINNYAKQIASLNDQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGSTARQLAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDANGDAGEDFFAIGKPAVLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVTRLASNTTFTVTPDANGKVAFDGLELTFTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMASEEDAGDSDNRNGQALLDLQSNSKTVGGAKSFNDAYASLVSDIGNKTATLKTSSATQGNVVTQLSNQQQSISGVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR", - "protein_translation_length": 547, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129046" - ], - [ - "gene_synonym", - "flaT" - ], - [ - "gene_synonym", - "b1083" - ], - [ - "gene_synonym", - "JW1070" - ], - [ - "gene_synonym", - "EcoGene:EG11545" - ], - [ - "gene_synonym", - "ECK1068" - ], - [ - "gene_synonym", - "ASAP:ABE-0003666" - ], - [ - "gene_synonym", - "GeneID:945646" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P29744" - ], - [ - "gene_synonym", - "NP_415601.1" - ], - [ - "gene_synonym", - "flgL" - ] - ], - "dna_sequence": "ATGCGTTTCAGTACACAGATGATGTACCAGCAAAACATGCGTGGTATCACCAATTCTCAGGCAGAATGGATGAAGTACGGCGAACAGATGTCGACGGGTAAGCGAGTCGTTAACCCTTCTGACGATCCCATTGCTGCATCACAAGCCGTAGTTCTCTCCCAGGCACAGGCGCAAAACAGCCAGTACACGCTGGCGCGTACTTTCGCCACTCAAAAAGTGTCACTGGAAGAGAGTGTACTTAGCCAGGTCACCACTGCTATCCAGAATGCTCAGGAAAAAATTGTCTACGCCAGCAATGGCACCTTGAGTGACGATGACCGGGCCTCGCTGGCTACGGATATTCAGGGGCTTCGTGACCAGTTGCTGAATCTGGCAAACACCACTGACGGTAACGGGCGCTACATTTTTGCCGGTTATAAAACAGAGACTGCGCCGTTTAGCGAAGAGAAAGGGAAATACGTCGGTGGAGCAGAAAGTATTAAACAACAGGTCGATGCTTCGCGTTCGATGGTGATAGGGCACACGGGTGACAAAATTTTCGACAGTATTACCAGCAACGCGGTAGCGGAACCAGACGGTAGCGCTTCTGAAACCAATCTTTTTGCCATGCTGGATAGTGCCATCGCAGCCCTGAAAACGCCGGTCGCGGATAGCGAAGCGGATAAAGAAACCGCCGCTGCGGCGTTAGATAAAACCAACCGCGGACTGAAAAACTCGCTGAACAATGTGCTGACTGTTCGCGCGGAATTAGGCACGCAGCTGAACGAACTGGAGTCGCTGGATTCATTAGGTAGCGATCGCGCTTTAGGGCAAACGCAGCAGATGAGCGATCTGGTTGATGTGGACTGGAATGCAACTATTTCATCTTACATCATGCAGCAAACGGCATTGCAGGCATCGTATAAAGCATTTACCGATATGCAGGGATTGTCGCTCTTCCAGCTCAGCAAATAA", - "dna_sequence_length": 954, - "functions": [ - "flagellar hook-filament junction protein" - ], - "id": "CDS_1061", - "location": [ - [ - "NC_000913", - 1140033, - "+", - 954 - ] - ], - "md5": "38b4c7da86aa443757a984cc1c26c594", - "parent_gene": "", - "protein_md5": "b8fdcc9a6bb467597e983f2b572b97df", - "protein_translation": "MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLFQLSK", - "protein_translation_length": 317, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1071" - ], - [ - "gene_synonym", - "GI:16129047" - ], - [ - "gene_synonym", - "b1084" - ], - [ - "gene_synonym", - "EcoGene:EG10859" - ], - [ - "gene_synonym", - "NP_415602.1" - ], - [ - "gene_synonym", - "GeneID:945641" - ], - [ - "gene_synonym", - "ASAP:ABE-0003668" - ], - [ - "gene_synonym", - "rne" - ], - [ - "gene_synonym", - "ECK1069" - ], - [ - "gene_synonym", - "hmp1" - ], - [ - "gene_synonym", - "ams" - ], - [ - "gene_synonym", - "smbB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21513" - ] - ], - "dna_sequence": "ATGAAAAGAATGTTAATCAACGCAACTCAGCAGGAAGAGTTGCGCGTTGCCCTTGTAGATGGGCAGCGTCTGTATGACCTGGATATCGAAAGTCCAGGGCACGAGCAGAAAAAGGCAAACATCTACAAAGGTAAAATCACCCGCATTGAACCGAGTCTGGAAGCTGCTTTTGTTGATTACGGCGCTGAACGTCACGGTTTCCTCCCACTAAAAGAAATTGCCCGCGAATATTTCCCTGCTAACTACAGTGCTCATGGTCGTCCCAACATTAAAGATGTGTTGCGTGAAGGTCAGGAAGTCATTGTTCAGATCGATAAAGAAGAGCGCGGCAACAAAGGCGCGGCATTAACCACCTTTATCAGTCTGGCGGGTAGCTATCTGGTTCTGATGCCGAACAACCCGCGCGCGGGTGGCATTTCTCGCCGTATCGAAGGCGACGACCGTACCGAATTAAAAGAAGCACTGGCAAGCCTTGAACTGCCGGAAGGCATGGGGCTTATCGTGCGCACCGCTGGCGTCGGCAAATCTGCTGAGGCGCTGCAATGGGATTTAAGCTTCCGTCTGAAACACTGGGAAGCCATCAAAAAAGCCGCTGAAAGCCGCCCGGCCCCGTTCCTGATTCATCAGGAGAGCAACGTAATCGTTCGCGCATTCCGCGATTACTTACGTCAGGACATCGGCGAAATCCTTATCGATAACCCGAAAGTGCTCGAACTGGCACGTCAGCATATCGCTGCATTAGGTCGCCCGGATTTCAGCAGCAAAATCAAACTGTACACCGGCGAGATCCCGCTGTTCAGCCACTACCAGATCGAGTCACAGATCGAGTCCGCCTTCCAGCGTGAAGTTCGTCTGCCGTCTGGTGGTTCCATTGTTATCGACAGCACCGAAGCGTTAACGGCCATCGACATCAACTCCGCACGCGCGACCCGCGGCGGCGATATCGAAGAAACCGCGTTTAACACTAACCTCGAAGCTGCCGATGAGATTGCTCGTCAGCTGCGCCTGCGTGACCTCGGCGGCCTGATTGTTATCGACTTCATCGACATGACGCCAGTACGCCACCAGCGTGCGGTAGAAAACCGTCTGCGTGAAGCGGTGCGTCAGGACCGTGCGCGTATTCAAATCAGCCATATTTCTCGCTTTGGCCTGCTGGAAATGTCCCGTCAGCGCCTGAGCCCATCACTGGGTGAATCCAGTCATCACGTTTGTCCGCGTTGTTCTGGTACTGGCACCGTGCGTGACAACGAATCGCTGTCGCTCTCTATTCTGCGTCTGATCGAAGAAGAAGCGCTGAAAGAGAACACCCAGGAAGTTCACGCCATTGTTCCTGTGCCAATCGCTTCTTACCTGCTGAATGAAAAACGTTCTGCGGTAAATGCCATTGAAACTCGTCAGGACGGTGTGCGCTGTGTAATTGTGCCAAACGATCAGATGGAAACCCCGCACTACCACGTGCTGCGCGTGCGTAAAGGGGAAGAAACCCCAACCTTAAGCTACATGCTGCCGAAGCTGCATGAAGAAGCGATGGCGCTGCCGTCTGAAGAAGAGTTCGCTGAACGTAAGCGTCCGGAACAACCTGCGCTGGCAACCTTTGCCATGCCGGATGTGCCGCCTGCGCCAACGCCAGCTGAACCTGCCGCGCCTGTTGTAGCTCCAGCACCGAAAGCTGCACCGGCAACACCAGCAGCTCCTGCACAACCTGGGCTGTTGAGCCGCTTCTTCGGCGCACTGAAAGCGCTGTTCAGCGGTGGTGAAGAAACCAAACCGACCGAGCAACCAGCACCGAAAGCAGAAGCGAAACCGGAACGTCAACAGGATCGTCGCAAGCCTCGTCAGAACAACCGCCGTGACCGTAATGAGCGCCGCGACACCCGTAGTGAACGTACTGAAGGCAGCGATAATCGCGAAGAAAACCGTCGTAATCGTCGCCAGGCACAGCAGCAGACTGCCGAGACGCGTGAGAGCCGTCAGCAGGCTGAGGTAACGGAAAAAGCGCGTACCGCCGACGAGCAGCAAGCGCCGCGTCGTGAACGTAGCCGCCGCCGTAATGATGATAAACGTCAGGCGCAACAAGAAGCGAAGGCGCTGAATGTTGAAGAGCAATCTGTTCAGGAAACCGAACAGGAAGAACGTGTACGTCCGGTTCAGCCGCGTCGTAAACAGCGTCAGCTCAATCAGAAAGTGCGTTACGAGCAAAGCGTAGCCGAAGAAGCGGTAGTCGCACCGGTGGTTGAAGAAACTGTCGCTGCCGAACCAATTGTTCAGGAAGCGCCAGCTCCACGCACAGAACTGGTGAAAGTCCCGCTGCCAGTCGTAGCGCAAACTGCACCAGAACAGCAAGAAGAGAACAATGCTGATAACCGTGACAACGGTGGCATGCCGCGTCGTTCTCGCCGCTCGCCTCGTCACCTGCGCGTAAGTGGTCAGCGTCGTCGTCGCTATCGTGACGAGCGTTATCCAACCCAGTCGCCAATGCCGTTGACCGTAGCGTGCGCGTCTCCGGAACTGGCCTCTGGCAAAGTCTGGATCCGCTATCCAATTGTACGTCCGCAAGATGTACAGGTTGAAGAGCAGCGCGAACAGGAAGAAGTACATGTGCAGCCGATGGTGACTGAGGTCCCTGTCGCCGCCGCTATCGAACCGGTTGTTAGCGCGCCAGTTGTTGAAGAAGTGGCCGGTGTCGTAGAAGCCCCCGTTCAGGTTGCCGAACCGCAACCGGAAGTGGTTGAAACGACGCATCCTGAAGTGATCGCTGCCGCGGTAACTGAACAGCCGCAGGTGATTACCGAGTCTGATGTTGCCGTAGCCCAGGAAGTTGCAGAACAAGCAGAACCGGTGGTTGAACCGCAGGAAGAGACGGCAGATATTGAAGAAGTTGTCGAAACTGCTGAGGTTGTAGTTGCTGAACCTGAAGTTGTTGCTCAACCTGCCGCGCCAGTAGTCGCTGAAGTCGCAGCAGAAGTTGAAACGGTAGCTGCGGTCGAACCTGAGGTCACCGTTGAGCATAACCACGCTACCGCGCCAATGACGCGCGCTCCAGCACCGGAATATGTTCCGGAGGCACCGCGTCACAGTGACTGGCAGCGCCCTACTTTTGCCTTCGAAGGTAAAGGTGCCGCAGGTGGTCATACGGCAACACATCATGCCTCTGCCGCTCCTGCGCGTCCGCAACCTGTTGAGTAA", - "dna_sequence_length": 3186, - "functions": [ - "endoribonuclease", - "RNA-binding protein;RNA degradosome binding protein" - ], - "id": "CDS_1062", - "location": [ - [ - "NC_000913", - 1144367, - "-", - 3186 - ] - ], - "md5": "e695740d794a780e1acf90b9f09a4bd2", - "parent_gene": "", - "protein_md5": "a8cee9c2716290eeb9ef3a76382cc58f", - "protein_translation": "MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYMLPKLHEEAMALPSEEEFAERKRPEQPALATFAMPDVPPAPTPAEPAAPVVAPAPKAAPATPAAPAQPGLLSRFFGALKALFSGGEETKPTEQPAPKAEAKPERQQDRRKPRQNNRRDRNERRDTRSERTEGSDNREENRRNRRQAQQQTAETRESRQQAEVTEKARTADEQQAPRRERSRRRNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRRKQRQLNQKVRYEQSVAEEAVVAPVVEETVAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQQEENNADNRDNGGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASGKVWIRYPIVRPQDVQVEEQREQEEVHVQPMVTEVPVAAAIEPVVSAPVVEEVAGVVEAPVQVAEPQPEVVETTHPEVIAAAVTEQPQVITESDVAVAQEVAEQAEPVVEPQEETADIEEVVETAEVVVAEPEVVAQPAAPVVAEVAAEVETVAAVEPEVTVEHNHATAPMTRAPAPEYVPEAPRHSDWQRPTFAFEGKGAAGGHTATHHASAAPARPQPVE", - "protein_translation_length": 1061, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003672" - ], - [ - "gene_synonym", - "EcoGene:EG14413" - ], - [ - "gene_synonym", - "yceQ" - ], - [ - "gene_synonym", - "b1085" - ], - [ - "gene_synonym", - "ECK1070" - ], - [ - "gene_synonym", - "NP_415603.2" - ], - [ - "gene_synonym", - "GeneID:945640" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P62066" - ], - [ - "gene_synonym", - "GI:90111210" - ], - [ - "gene_synonym", - "JW5154" - ] - ], - "dna_sequence": "GTGTCGGTTGCCCGTTTTTCATGCGGAAAAACAGCGCAATTATCAAAGAAACAGACTGGGTATTACTCTCCAGAAATATTTCCATCTACCGGTAAGGACTGCAACCCGCAGCCCGCTAACTGCCTGAAAGATCAATACGTCTTACGCCATTGCTGCGTGGATGATCGGTCGGGCAAAATGGGTTATTCCGTAAAATTTCTTGTTTTAACAAGGATGGACACGGAAACGGCCTCATTATTCCACTGCAAGCCTTGTTATAGCAAGATGACTTTTACCATTTATCACCCGCTTACTCACAGTTTTTTCACTTCTTGCTGGTGA", - "dna_sequence_length": 321, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1063", - "location": [ - [ - "NC_000913", - 1144502, - "+", - 321 - ] - ], - "md5": "985d9ba8d5364c6a1bfd69d156d9c212", - "parent_gene": "", - "protein_md5": "1a7f91c874a9ba2ccb82ed6f20bb63a3", - "protein_translation": "MSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFFTSCW", - "protein_translation_length": 106, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1072" - ], - [ - "gene_synonym", - "EcoGene:EG11118" - ], - [ - "gene_synonym", - "b1086" - ], - [ - "gene_synonym", - "ECK1071" - ], - [ - "gene_synonym", - "ASAP:ABE-0003675" - ], - [ - "gene_synonym", - "GI:16129049" - ], - [ - "gene_synonym", - "yceC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA39" - ], - [ - "gene_synonym", - "rluC" - ], - [ - "gene_synonym", - "NP_415604.1" - ], - [ - "gene_synonym", - "GeneID:945637" - ] - ], - "dna_sequence": "ATGAAAACAGAGACTCCATCCGTAAAAATTGTTGCTATCACCGCTGACGAAGCGGGGCAACGTATCGATAACTTTTTGCGTACCCAATTGAAAGGCGTACCAAAAAGTATGATTTACCGTATTTTGCGTAAAGGCGAAGTGCGGGTGAACAAAAAACGTATTAAGCCTGAATATAAACTCGAAGCGGGTGATGAGGTGCGTATTCCACCGGTTCGCGTTGCTGAGCGGGAAGAAGAGGCGGTTTCGCCACATCTGCAAAAGGTGGCGGCGCTGGCGGACGTCATCTTATATGAAGATGATCACATCCTGGTGCTGAATAAACCTTCCGGTACGGCGGTACATGGCGGCAGTGGTTTAAGCTTCGGCGTTATTGAAGGTTTGCGGGCGTTGCGCCCGGAAGCGCGGTTCCTTGAACTGGTTCATCGTCTTGACCGGGACACCTCAGGTGTTTTGCTGGTAGCGAAAAAACGCTCGGCGTTGCGTTCTCTGCATGAGCAATTACGTGAAAAAGGGATGCAAAAAGATTACCTGGCGCTGGTGCGCGGTCAGTGGCAGTCGCATGTGAAGAGCGTTCAAGCACCGTTACTGAAAAATATTCTGCAAAGCGGCGAACGTATCGTGCGTGTGAGTCAGGAAGGCAAACCGTCGGAAACACGCTTTAAAGTGGAAGAACGCTATGCATTTGCCACCCTGGTGCGTTGTAGCCCGGTAACAGGGCGTACTCACCAGATCCGTGTGCATACACAATATGCGGGTCATCCGATTGCCTTTGACGATCGCTACGGTGACCGTGAATTTGACAGGCAGCTCACTGAAGCAGGCACGGGATTAAATCGCCTGTTCCTGCACGCTGCAGCGTTGAAGTTTACTCATCCGGGGACCGGTGAGGTGATGCGTATCGAAGCTCCGATGGATGAAGGTTTGAAGCGTTGTTTGCAAAAGCTGCGTAACGCGCGCTAA", - "dna_sequence_length": 960, - "functions": [ - "23S rRNA pseudouridine(955,2504,2580) synthase" - ], - "id": "CDS_1064", - "location": [ - [ - "NC_000913", - 1144940, - "+", - 960 - ] - ], - "md5": "0382455f7fe4a8abf3ba3b5bbe99689c", - "parent_gene": "", - "protein_md5": "3a515f0a14370df3c1280722b9a64586", - "protein_translation": "MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR", - "protein_translation_length": 319, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1072" - ], - [ - "gene_synonym", - "EcoGene:EG11438" - ], - [ - "gene_synonym", - "b1087" - ], - [ - "gene_synonym", - "GI:90111211" - ], - [ - "gene_synonym", - "ASAP:ABE-0003678" - ], - [ - "gene_synonym", - "NP_415605.2" - ], - [ - "gene_synonym", - "yceF" - ], - [ - "gene_synonym", - "GeneID:945631" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A729" - ], - [ - "gene_synonym", - "JW5155" - ] - ], - "dna_sequence": "ATGCCTAAACTTATTTTAGCCTCCACCTCGCCATGGCGTCGCGCTCTTCTGGAAAAACTGCAAATCTCTTTTGAATGTGCAGCACCAGAGGTCGACGAAACCCCACGCAGCGACGAATCACCGCGACAGTTGGTGCTTCGACTGGCACAAGAAAAAGCGCAATCTCTGGCGTCACGTTATCCGGATCATTTAATTATTGGTTCAGACCAGGTATGTGTTCTTGATGGCGAAATCACCGGTAAACCGTTAACGGAAGAAAATGCCCGTCTGCAATTACGCAAAGCCAGCGGCAATATCGTCACCTTCTATACTGGACTGGCGTTGTTTAATTCGGCGAATGGGCATCTGCAAACAGAAGTGGAGCCTTTTGACGTCCATTTCCGTCACCTGAGCGAGGCGGAGATTGATAATTACGTGCGTAAAGAGCATCCCCTGCACTGCGCGGGTAGCTTTAAGAGTGAAGGATTTGGCATTACGCTGTTTGAGCGTTTAGAGGGGCGTGATCCTAACACGCTGGTTGGTTTACCGCTAATCGCGCTGTGTCAGATGTTACGTCGGGAAGGGAAAAACCCGCTGATGGGATAG", - "dna_sequence_length": 585, - "functions": [ - "m(7)GTP pyrophosphatase" - ], - "id": "CDS_1065", - "location": [ - [ - "NC_000913", - 1146595, - "-", - 585 - ] - ], - "md5": "0a5152373bc676b74212698f5b446707", - "parent_gene": "", - "protein_md5": "4351f757cf6aee852ca815343ae1137d", - "protein_translation": "MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG", - "protein_translation_length": 194, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129051" - ], - [ - "gene_synonym", - "ECK1074" - ], - [ - "gene_synonym", - "EcoGene:EG11119" - ], - [ - "gene_synonym", - "JW1074" - ], - [ - "gene_synonym", - "b1088" - ], - [ - "gene_synonym", - "GeneID:945650" - ], - [ - "gene_synonym", - "NP_415606.1" - ], - [ - "gene_synonym", - "yceD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB28" - ], - [ - "gene_synonym", - "ASAP:ABE-0003684" - ] - ], - "dna_sequence": "ATGCAAAAGGTAAAATTACCCCTGACTCTCGATCCGGTTCGTACGGCTCAAAAACGCCTTGATTACCAGGGTATCTATACCCCTGATCAGGTTGAGCGCGTCGCCGAATCCGTAGTCAGTGTGGACAGTGATGTGGAATGCTCCATGTCGTTCGCTATCGATAACCAACGTCTCGCAGTGTTAAACGGCGATGCGAAGGTGACGGTAACGCTCGAGTGTCAGCGTTGCGGGAAGCCGTTTACTCATCAGGTCTACACAACGTATTGTTTTAGTCCTGTGCGTTCAGACGAACAGGCTGAAGCACTGCCGGAAGCGTATGAACCGATTGAGGTTAACGAATTCGGTGAAATCGATCTGCTTGCAATGGTTGAAGATGAAATCATCCTCGCCTTGCCGGTAGTTCCGGTGCATGATTCTGAACACTGTGAAGTGTCCGAAGCGGACATGGTCTTTGGTGAACTGCCTGAAGAAGCGCAAAAGCCAAACCCATTTGCCGTATTAGCCAGCTTAAAGCGTAAGTAA", - "dna_sequence_length": 522, - "functions": [ - "DUF177 family protein" - ], - "id": "CDS_1066", - "location": [ - [ - "NC_000913", - 1146794, - "+", - 522 - ] - ], - "md5": "b110ff1de0ce4d160e456ad9fd5e1d26", - "parent_gene": "", - "protein_md5": "53fd3b3ffa801fe18b080a169dc0e83d", - "protein_translation": "MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSDVECSMSFAIDNQRLAVLNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEALPEAYEPIEVNEFGEIDLLAMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEAQKPNPFAVLASLKRK", - "protein_translation_length": 173, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415607.1" - ], - [ - "gene_synonym", - "ECK1075" - ], - [ - "gene_synonym", - "JW1075" - ], - [ - "gene_synonym", - "b1089" - ], - [ - "gene_synonym", - "EcoGene:EG10890" - ], - [ - "gene_synonym", - "ASAP:ABE-0003686" - ], - [ - "gene_synonym", - "GI:16129052" - ], - [ - "gene_synonym", - "GeneID:945657" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7N4" - ], - [ - "gene_synonym", - "rpmF" - ] - ], - "dna_sequence": "ATGGCCGTACAACAGAATAAACCAACCCGTTCCAAACGTGGCATGCGTCGTTCCCATGACGCGCTGACCGCAGTCACCAGCCTGTCTGTAGACAAAACTTCTGGTGAAAAACACCTGCGTCACCACATCACTGCCGACGGTTACTACCGCGGCCGCAAGGTCATCGCTAAGTAA", - "dna_sequence_length": 174, - "functions": [ - "50S ribosomal subunit protein L32" - ], - "id": "CDS_1067", - "location": [ - [ - "NC_000913", - 1147367, - "+", - 174 - ] - ], - "md5": "4ba2423edf4a86052d64b39813b8dfdf", - "parent_gene": "", - "protein_md5": "211eeaac246f953b67ca2ccd0477fe3b", - "protein_translation": "MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK", - "protein_translation_length": 57, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1076" - ], - [ - "gene_synonym", - "NP_415608.2" - ], - [ - "gene_synonym", - "b1090" - ], - [ - "gene_synonym", - "plsX" - ], - [ - "gene_synonym", - "ASAP:ABE-0003692" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27247" - ], - [ - "gene_synonym", - "GI:90111212" - ], - [ - "gene_synonym", - "GeneID:946165" - ], - [ - "gene_synonym", - "EcoGene:EG11437" - ], - [ - "gene_synonym", - "JW5156" - ] - ], - "dna_sequence": "TTGACACGTCTAACCCTGGCGTTAGATGTCATGGGAGGGGATTTTGGCCCTTCCGTGACAGTGCCTGCAGCATTGCAGGCACTGAATTCTAATTCGCAACTCACTCTTCTTTTAGTCGGCAATTCCGACGCCATCACGCCATTACTTGCTAAAGCTGACTTTGAACAACGTTCGCGTCTGCAGATTATTCCTGCGCAGTCAGTTATCGCCAGTGATGCCCGGCCTTCGCAAGCTATCCGCGCCAGTCGTGGGAGTTCAATGCGCGTGGCCCTGGAGCTGGTGAAAGAAGGTCGAGCGCAAGCCTGTGTCAGTGCCGGTAATACCGGGGCGCTGATGGGGCTGGCAAAATTATTACTCAAGCCCCTGGAGGGGATTGAGCGTCCGGCGCTGGTGACGGTATTACCACATCAGCAAAAGGGCAAAACGGTGGTCCTTGACTTAGGGGCCAACGTCGATTGTGACAGCACAATGCTGGTGCAATTTGCCATTATGGGCTCAGTTCTGGCTGAAGAGGTGGTGGAAATTCCCAATCCTCGCGTGGCGTTGCTCAATATTGGTGAAGAAGAAGTAAAGGGTCTCGACAGTATTCGGGATGCCTCAGCGGTGCTTAAAACAATCCCTTCTATCAATTATATCGGCTATCTTGAAGCCAATGAGTTGTTAACTGGCAAGACAGATGTGCTGGTTTGTGACGGCTTTACAGGAAATGTCACATTAAAGACGATGGAAGGTGTTGTCAGGATGTTCCTTTCTCTGCTGAAATCTCAGGGTGAAGGGAAAAAACGGTCGTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGAGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCGGAACTCTGCGGTAG", 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"UniProtKB/Swiss-Prot:P0A6R0" - ], - [ - "gene_synonym", - "GeneID:946003" - ], - [ - "gene_synonym", - "JW1077" - ], - [ - "gene_synonym", - "EcoGene:EG10277" - ], - [ - "gene_synonym", - "fabH" - ] - ], - "dna_sequence": "ATGTATACGAAGATTATTGGTACTGGCAGCTATCTGCCCGAACAAGTGCGGACAAACGCCGATTTGGAAAAAATGGTGGACACCTCTGACGAGTGGATTGTCACTCGTACCGGTATCCGCGAACGCCACATTGCCGCGCCAAACGAAACCGTTTCAACCATGGGCTTTGAAGCGGCGACACGCGCAATTGAGATGGCGGGCATTGAGAAAGACCAGATTGGCCTGATCGTTGTGGCAACGACTTCTGCTACGCACGCTTTCCCGAGCGCAGCTTGTCAGATTCAAAGCATGTTGGGCATTAAAGGTTGCCCGGCATTTGACGTTGCAGCAGCCTGCGCAGGTTTCACCTATGCATTAAGCGTAGCCGATCAATACGTGAAATCTGGGGCGGTGAAGTATGCTCTGGTCGTCGGTTCCGATGTACTGGCGCGCACCTGCGATCCAACCGATCGTGGGACTATTATTATTTTTGGCGATGGCGCGGGCGCTGCGGTGCTGGCTGCCTCTGAAGAGCCGGGAATCATTTCCACCCATCTGCATGCCGACGGTAGTTATGGTGAATTGCTGACGCTGCCAAACGCCGACCGCGTGAATCCAGAGAATTCAATTCATCTGACGATGGCGGGCAACGAAGTCTTCAAGGTTGCGGTAACGGAACTGGCGCACATCGTTGATGAGACGCTGGCGGCGAATAATCTTGACCGTTCTCAACTGGACTGGCTGGTTCCGCATCAGGCTAACCTGCGTATTATCAGTGCAACGGCGAAAAAACTCGGTATGTCTATGGATAATGTCGTGGTGACGCTGGATCGCCACGGTAATACCTCTGCGGCCTCTGTCCCGTGCGCGCTGGATGAAGCTGTACGCGACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAG", - "dna_sequence_length": 954, - "functions": [ - "3-oxoacyl-[acyl-carrier-protein] synthase III" - ], - "id": "CDS_1069", - "location": [ - [ - "NC_000913", - 1148759, - "+", - 954 - ] - ], - "md5": "1d9c19409a533beefdfb304d3c3adab2", - "parent_gene": "", - "protein_md5": "982e8fe64b3c7e5a1ad44dbbd2c9d022", - "protein_translation": "MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASEEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF", - "protein_translation_length": 317, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003698" - ], - [ - "gene_synonym", - "NP_415610.1" - ], - [ - "gene_synonym", - "GI:16129055" - ], - [ - "gene_synonym", - "b1092" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAI9" - ], - [ - "gene_synonym", - "GeneID:945766" - ], - [ - "gene_synonym", - "JW1078" - ], - [ - "gene_synonym", - "ECK1078" - ], - [ - "gene_synonym", - "fabD" - ], - [ - "gene_synonym", - "EcoGene:EG11317" - ], - [ - "gene_synonym", - "tfpA" - ] - ], - "dna_sequence": "ATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCTATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGTATCGCGTATGGCAGCAGCAGGGCGGTAAAGCACCGGCAATGATGGCCGGTCACAGCCTGGGGGAATACTCCGCGCTGGTTTGCGCTGGTGTGATTGATTTCGCTGATGCGGTGCGTCTGGTTGAGATGCGCGGCAAGTTCATGCAAGAAGCCGTACCGGAAGGCACGGGCGCTATGGCGGCAATCATCGGTCTGGATGATGCGTCTATTGCGAAAGCGTGTGAAGAAGCTGCAGAAGGTCAGGTCGTTTCTCCGGTAAACTTTAACTCTCCGGGACAGGTGGTTATTGCCGGTCATAAAGAAGCGGTTGAGCGTGCTGGCGCTGCCTGTAAAGCGGCGGGCGCAAAACGCGCGCTGCCGTTACCAGTGAGCGTACCGTCTCACTGTGCGCTGATGAAACCAGCAGCCGACAAACTGGCAGTAGAATTAGCGAAAATCACCTTTAACGCACCAACAGTTCCTGTTGTGAATAACGTTGATGTGAAATGCGAAACCAATGGTGATGCCATCCGTGACGCACTGGTACGTCAGTTGTATAACCCGGTTCAGTGGACGAAGTCTGTTGAGTACATGGCAGCGCAAGGCGTAGAACATCTCTATGAAGTCGGCCCGGGCAAAGTGCTTACTGGCCTGACGAAACGCATTGTCGACACCCTGACCGCCTCGGCGCTGAACGAACCTTCAGCGATGGCAGCGGCGCTCGAGCTTTAA", - "dna_sequence_length": 930, - "functions": [ - "malonyl-CoA-[acyl-carrier-protein] transacylase" - ], - "id": "CDS_1070", - "location": [ - [ - "NC_000913", - 1149728, - "+", - 930 - ] - ], - "md5": "635a513a9e77c72c32d68a86f4152dc7", - "parent_gene": "", - "protein_md5": "cdf8527e4138c1721447a37f11f48ad1", - "protein_translation": "MTQFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVNFNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAKITFNAPTVPVVNNVDVKCETNGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASALNEPSAMAAALEL", - "protein_translation_length": 309, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1093" - ], - [ - "gene_synonym", - "GI:16129056" - ], - [ - "gene_synonym", - "JW1079" - ], - [ - "gene_synonym", - "ASAP:ABE-0003700" - ], - [ - "gene_synonym", - "NP_415611.1" - ], - [ - "gene_synonym", - "GeneID:945645" - ], - [ - "gene_synonym", - "fabG" - ], - [ - "gene_synonym", - "EcoGene:EG11318" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEK2" - ], - [ - "gene_synonym", - "ECK1079" - ] - ], - "dna_sequence": "ATGAATTTTGAAGGAAAAATCGCACTGGTAACCGGTGCAAGCCGCGGAATTGGCCGCGCAATTGCTGAAACGCTCGCAGCCCGTGGCGCGAAAGTTATTGGCACTGCGACCAGTGAAAATGGCGCTCAGGCGATCAGTGATTATTTAGGTGCCAACGGCAAAGGTCTGATGTTGAATGTGACCGACCCGGCATCTATCGAATCTGTTCTGGAAAAAATTCGCGCAGAATTTGGTGAAGTGGATATCCTGGTCAATAATGCCGGTATCACTCGTGATAACCTGTTAATGCGAATGAAAGATGAAGAGTGGAACGATATTATCGAAACCAACCTTTCATCTGTTTTCCGTCTGTCAAAAGCGGTAATGCGCGCTATGATGAAAAAGCGTCATGGTCGTATTATCACTATCGGTTCTGTGGTTGGTACCATGGGAAATGGCGGTCAGGCCAACTACGCTGCGGCGAAAGCGGGCTTGATCGGCTTCAGTAAATCACTGGCGCGCGAAGTTGCGTCACGCGGTATTACTGTAAACGTTGTTGCTCCGGGCTTTATTGAAACGGACATGACACGTGCGCTGAGCGATGACCAGCGTGCGGGTATCCTGGCGCAGGTTCCTGCGGGTCGCCTCGGCGGCGCACAGGAAATCGCCAACGCGGTTGCATTCCTGGCATCCGACGAAGCAGCTTACATCACGGGTGAAACTTTGCATGTGAACGGCGGGATGTACATGGTCTGA", - "dna_sequence_length": 735, - "functions": [ - "3-oxoacyl-[acyl-carrier-protein] reductase" - ], - "id": "CDS_1071", - "location": [ - [ - "NC_000913", - 1150670, - "+", - 735 - ] - ], - "md5": "43416a296aac81e2ebc59f20ee6bfbe2", - "parent_gene": "", - "protein_md5": "c22a193608c9d8f2f5ee499e05b45f4b", - "protein_translation": "MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMYMV", - "protein_translation_length": 244, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1080" - ], - [ - "gene_synonym", - "b1094" - ], - [ - "gene_synonym", - "acpP" - ], - [ - "gene_synonym", - "GeneID:944805" - ], - [ - "gene_synonym", - "GI:16129057" - ], - [ - "gene_synonym", - "ASAP:ABE-0003703" - ], - [ - "gene_synonym", - "ECK1080" - ], - [ - "gene_synonym", - "NP_415612.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6A8" - ], - [ - "gene_synonym", - "EcoGene:EG50003" - ] - ], - "dna_sequence": "ATGAGCACTATCGAAGAACGCGTTAAGAAAATTATCGGCGAACAGCTGGGCGTTAAGCAGGAAGAAGTTACCAACAATGCTTCTTTCGTTGAAGACCTGGGCGCGGATTCTCTTGACACCGTTGAGCTGGTAATGGCTCTGGAAGAAGAGTTTGATACTGAGATTCCGGACGAAGAAGCTGAGAAAATCACCACCGTTCAGGCTGCCATTGATTACATCAACGGCCACCAGGCGTAA", - "dna_sequence_length": 237, - "functions": [ - "acyl carrier protein (ACP)" - ], - "id": "CDS_1072", - "location": [ - [ - "NC_000913", - 1151615, - "+", - 237 - ] - ], - "md5": "60a76ccbaa64eb77460e1ef2dc256788", - "parent_gene": "", - "protein_md5": "10c00c0561de7dcf4030f0d748031d11", - "protein_translation": "MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA", - "protein_translation_length": 78, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1081" - ], - [ - "gene_synonym", - "b1095" - ], - [ - "gene_synonym", - "GeneID:946665" - ], - [ - "gene_synonym", - "GI:16129058" - ], - [ - "gene_synonym", - "ECK1081" - ], - [ - "gene_synonym", - "NP_415613.1" - ], - [ - "gene_synonym", - "vtr" - ], - [ - "gene_synonym", - "EcoGene:EG12606" - ], - [ - "gene_synonym", - "fabF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAI5" - ], - [ - "gene_synonym", - "ASAP:ABE-0003705" - ], - [ - "gene_synonym", - "cvc" - ], - [ - "gene_synonym", - "fabJ" - ] - ], - "dna_sequence": "GTGTCTAAGCGTCGTGTAGTTGTGACCGGACTGGGCATGTTGTCTCCTGTCGGCAATACCGTAGAGTCTACCTGGAAAGCTCTGCTTGCCGGTCAGAGTGGCATCAGCCTAATCGACCATTTCGATACTAGCGCCTATGCAACGAAATTTGCTGGCTTAGTAAAGGATTTTAACTGTGAGGACATTATCTCGCGCAAAGAACAGCGCAAGATGGATGCCTTCATTCAATATGGAATTGTCGCTGGCGTTCAGGCCATGCAGGATTCTGGCCTTGAAATAACGGAAGAGAACGCAACCCGCATTGGTGCCGCAATTGGCTCCGGGATTGGCGGCCTCGGACTGATCGAAGAAAACCACACATCTCTGATGAACGGTGGTCCACGTAAGATCAGCCCATTCTTCGTTCCGTCAACGATTGTGAACATGGTGGCAGGTCATCTGACTATCATGTATGGCCTGCGTGGCCCGAGCATCTCTATCGCGACTGCCTGTACTTCCGGCGTGCACAACATTGGCCATGCTGCGCGTATTATCGCGTATGGCGATGCTGACGTGATGGTTGCAGGTGGCGCAGAGAAAGCCAGTACGCCGCTGGGCGTTGGTGGTTTTGGCGCGGCACGTGCATTATCTACCCGCAATGATAACCCGCAAGCGGCGAGCCGCCCGTGGGATAAAGAGCGTGATGGTTTCGTACTGGGCGATGGTGCCGGTATGCTGGTACTTGAAGAGTACGAACACGCGAAAAAACGCGGTGCGAAAATTTACGCTGAACTCGTCGGCTTTGGTATGAGCAGCGATGCTTATCATATGACGTCACCGCCAGAAAATGGCGCAGGCGCAGCTCTGGCGATGGCAAATGCTCTGCGTGATGCAGGCATTGAAGCGAGTCAGATTGGCTACGTTAACGCGCACGGTACTTCTACGCCGGCTGGCGATAAAGCTGAAGCGCAGGCGGTGAAAACCATCTTCGGTGAAGCTGCAAGCCGTGTGTTGGTAAGCTCCACGAAATCTATGACCGGTCACCTGTTAGGTGCGGCGGGTGCAGTAGAATCTATCTACTCCATCCTGGCGCTGCGCGATCAGGCTGTTCCGCCAACCATCAACCTGGATAACCCGGATGAAGGTTGCGATCTGGATTTCGTACCGCACGAAGCGCGTCAGGTTAGCGGAATGGAATACACTCTGTGTAACTCCTTCGGCTTCGGTGGCACTAATGGTTCTTTGATCTTTAAAAAGATCTAA", - "dna_sequence_length": 1242, - "functions": [ - "3-oxoacyl-[acyl-carrier-protein] synthase II" - ], - "id": "CDS_1073", - "location": [ - [ - "NC_000913", - 1151939, - "+", - 1242 - ] - ], - "md5": "94b26da01716469b105d3cec80abe2d6", - "parent_gene": "", - "protein_md5": "25774368eecd8e1b45be65bb8277cfaa", - "protein_translation": "MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKKI", - "protein_translation_length": 413, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1096" - ], - [ - "gene_synonym", - "JW1082" - ], - [ - "gene_synonym", - "ASAP:ABE-0003709" - ], - [ - "gene_synonym", - "GI:16129059" - ], - [ - "gene_synonym", - "ECK1082" - ], - [ - "gene_synonym", - "NP_415614.1" - ], - [ - "gene_synonym", - "EcoGene:EG11493" - ], - [ - "gene_synonym", - "pabC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28305" - ], - [ - "gene_synonym", - "GeneID:946647" - ] - ], - "dna_sequence": "ATGTTCTTAATTAACGGTCATAAGCAGGAATCGCTGGCAGTAAGCGATCGGGCAACGCAGTTTGGTGATGGTTGTTTTACCACCGCCAGAGTTATCGACGGTAAAGTCAGTTTGTTATCGGCGCATATCCAGCGACTACAGGATGCTTGTCAGCGGTTGATGATTTCCTGTGACTTCTGGCCTCAGCTTGAACAAGAGATGAAAACGCTGGCAGCAGAACAGCAAAATGGTGTGCTGAAAGTCGTGATCAGTCGCGGTAGTGGCGGGCGAGGGTACAGCACATTGAACAGCGGACCGGCAACGCGGATTCTCTCCGTTACGGCTTATCCTGCACATTACGACCGTTTGCGTAACGAGGGGATTACGTTGGCGCTAAGCCCGGTGCGGCTGGGGCGCAATCCTCATCTTGCAGGTATTAAACATCTCAATCGTCTTGAGCAAGTATTGATTCGCTCTCATCTTGAGCAGACAAACGCTGATGAGGCGCTGGTCCTTGACAGCGAAGGGTGGGTTACGGAATGCTGTGCGGCTAATTTGTTCTGGCGGAAGGGCAACGTAGTTTATACGCCGCGACTGGATCAGGCAGGTGTTAACGGCATTATGCGACAATTCTGTATCCGTTTGCTGGCACAATCCTCTTATCAGCTTGTCGAAGTGCAAGCCTCTCTGGAAGAGTCGTTGCAGGCAGATGAGATGGTTATTTGTAATGCGTTAATGCCAGTGATGCCCGTATGTGCCTGTGGCGATGTCTCCTTTTCGTCAGCAACGTTATATGAATATTTAGCCCCACTTTGTGAGCGCCCGAATTAG", - "dna_sequence_length": 810, - "functions": [ - "4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex" - ], - "id": "CDS_1074", - "location": [ - [ - "NC_000913", - 1153300, - "+", - 810 - ] - ], - "md5": "f74826d77e6f4e12f94c3a83ee6bdcaf", - "parent_gene": "", - "protein_md5": "3508fe4b017a81b605b5f6824f1fce17", - "protein_translation": "MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNADEALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADEMVICNALMPVMPVCACGDVSFSSATLYEYLAPLCERPN", - "protein_translation_length": 269, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1097" - ], - [ - "gene_synonym", - "JW1083" - ], - [ - "gene_synonym", - "ECK1083" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28306" - ], - [ - "gene_synonym", - "NP_415615.1" - ], - [ - "gene_synonym", - "GI:16129060" - ], - [ - "gene_synonym", - "ASAP:ABE-0003712" - ], - [ - "gene_synonym", - "EcoGene:EG11494" - ], - [ - "gene_synonym", - "yceG" - ], - [ - "gene_synonym", - "GeneID:945660" - ] - ], - "dna_sequence": "ATGAAAAAAGTGTTATTGATAATCTTGTTATTGCTGGTGGTACTGGGTATCGCCGCTGGTGTGGGCGTCTGGAAGGTTCGCCATCTTGCCGACAGCAAATTGCTTATCAAAGAAGAGACGATATTTACCCTGAAGCCAGGGACCGGACGTCTGGCGCTCGGTGAACAGCTTTATGCCGATAAGATCATCAATCGTCCACGGGTTTTTCAATGGCTGCTGCGTATCGAACCGGATCTTTCTCACTTTAAAGCCGGGACTTACCGCTTTACACCGCAGATGACCGTGCGCGAGATGCTGAAATTGCTGGAAAGCGGTAAAGAAGCACAGTTCCCTCTGCGACTGGTAGAAGGGATGCGTCTGAGCGATTACCTCAAGCAATTGCGTGAGGCCCCGTATATCAAGCATACGCTGAGCGATGATAAGTACGCCACCGTAGCGCAGGCACTTGAACTGGAAAACCCGGAGTGGATTGAAGGTTGGTTCTGGCCAGACACCTGGATGTATACCGCCAATACCACCGATGTCGCGTTACTCAAGCGAGCGCACAAGAAAATGGTGAAAGCGGTCGATAGCGCCTGGGAAGGGCGTGCGGACGGTCTGCCTTATAAAGATAAAAACCAGTTGGTGACGATGGCATCAATTATCGAAAAAGAAACCGCCGTTGCCAGTGAACGCGATAAGGTTGCCTCAGTATTTATCAACCGTTTACGCATTGGTATGCGCCTGCAGACCGACCCGACCGTGATTTACGGGATGGGAGAGCGTTATAATGGCAAACTTTCTCGTGCAGACCTGGAAACGCCGACAGCGTATAACACCTATACCATTACCGGTCTGCCGCCAGGTGCGATAGCGACGCCGGGGGCGGATTCGCTGAAGGCTGCTGCGCATCCGGCAAAAACGCCGTATCTCTATTTTGTGGCCGATGGTAAAGGTGGTCACACGTTTAATACCAATCTTGCCAGTCATAACAAGTCTGTGCAGGATTATCTGAAAGTGCTTAAGGAAAAAAATGCGCAGTAA", - "dna_sequence_length": 1023, - "functions": [ - "septation protein, ampicillin sensitivity" - ], - "id": "CDS_1075", - "location": [ - [ - "NC_000913", - 1154112, - "+", - 1023 - ] - ], - "md5": "2bde88cd7d02c3bbeea4474c8e52bef7", - "parent_gene": "", - "protein_md5": "ca9f33268dbf27965963de3b46685bf4", - "protein_translation": "MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKPGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLLESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGWFWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDKVASVFINRLRIGMRLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVLKEKNAQ", - "protein_translation_length": 340, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12302" - ], - [ - "gene_synonym", - "JW1084" - ], - [ - "gene_synonym", - "GeneID:945663" - ], - [ - "gene_synonym", - "ASAP:ABE-0003714" - ], - [ - "gene_synonym", - "b1098" - ], - [ - "gene_synonym", - "GI:16129061" - ], - [ - "gene_synonym", - "ECK1084" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A720" - ], - [ - "gene_synonym", - "ycfG" - ], - [ - "gene_synonym", - "tmk" - ], - [ - "gene_synonym", - "NP_415616.1" - ] - ], - "dna_sequence": "ATGCGCAGTAAGTATATCGTCATTGAGGGGCTGGAAGGCGCAGGCAAAACTACCGCGCGTAATGTGGTGGTTGAGACGCTCGAGCAACTGGGTATCCGCGACATGGTTTTCACTCGGGAACCTGGCGGTACGCAACTTGCCGAAAAGTTAAGAAGCCTGGTGCTGGATATCAAATCGGTAGGCGATGAAGTCATTACCGATAAAGCCGAAGTTCTGATGTTTTATGCCGCGCGCGTTCAACTGGTAGAAACGGTCATCAAACCAGCTCTGGCTAACGGCACCTGGGTGATTGGCGATCGCCACGATCTCTCCACTCAGGCGTATCAGGGCGGCGGACGTGGTATTGACCAACATATGCTGGCAACACTGCGTGATGCTGTTCTCGGGGATTTTCGCCCCGACTTAACGCTCTATCTCGATGTTACCCCGGAAGTTGGCTTAAAACGCGCGCGTGCGCGCGGCGAGCTGGATCGTATTGAGCAAGAATCTTTCGATTTCTTTAATCGCACCCGCGCCCGCTATCTGGAACTGGCAGCACAAGATAAAAGCATTCATACCATTGATGCCACCCAGCCGCTGGAGGCCGTGATGGATGCAATCCGCACTACCGTGACCCACTGGGTGAAGGAGTTGGACGCATGA", - "dna_sequence_length": 642, - "functions": [ - "thymidylate kinase" - ], - "id": "CDS_1076", - "location": [ - [ - "NC_000913", - 1155124, - "+", - 642 - ] - ], - "md5": "8a11090d49790cd0d0a0b07e76189bad", - "parent_gene": "", - "protein_md5": "14a046f64260012ee400933c501ee8b5", - "protein_translation": "MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTVTHWVKELDA", - "protein_translation_length": 213, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1085" - ], - [ - "gene_synonym", - "GeneID:945661" - ], - [ - "gene_synonym", - "ASAP:ABE-0003716" - ], - [ - "gene_synonym", - "ECK1085" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28631" - ], - [ - "gene_synonym", - "EcoGene:EG11500" - ], - [ - "gene_synonym", - "GI:16129062" - ], - [ - "gene_synonym", - "b1099" - ], - [ - "gene_synonym", - "NP_415617.1" - ], - [ - "gene_synonym", - "holB" - ] - ], - "dna_sequence": "ATGAGATGGTATCCATGGTTACGACCTGATTTCGAAAAACTGGTAGCCAGCTATCAGGCCGGAAGAGGTCACCATGCGCTACTCATTCAGGCGTTACCGGGCATGGGCGATGATGCTTTAATCTACGCCCTGAGCCGTTATTTACTCTGCCAACAACCGCAGGGCCACAAAAGTTGCGGTCACTGTCGTGGATGTCAGTTGATGCAGGCTGGCACGCATCCCGATTACTACACCCTGGCTCCCGAAAAAGGAAAAAATACGCTGGGCGTTGATGCGGTACGTGAGGTCACCGAAAAGCTGAATGAGCACGCACGCTTAGGTGGTGCGAAAGTCGTTTGGGTAACCGATGCTGCCTTACTAACCGACGCCGCGGCTAACGCATTGCTGAAAACGCTTGAAGAGCCACCAGCAGAAACTTGGTTTTTCCTGGCTACCCGCGAGCCTGAACGTTTACTGGCAACATTACGTAGTCGTTGTCGGTTACATTACCTTGCGCCGCCGCCGGAACAGTACGCCGTGACCTGGCTTTCACGCGAAGTGACAATGTCACAGGATGCATTACTTGCCGCATTGCGCTTAAGCGCCGGTTCGCCTGGCGCGGCACTGGCGTTGTTTCAGGGAGATAACTGGCAGGCTCGTGAAACATTGTGTCAGGCGTTGGCATATAGCGTGCCATCGGGCGACTGGTATTCGCTGCTAGCGGCCCTTAATCATGAACAAGCTCCGGCGCGTTTACACTGGCTGGCAACGTTGCTGATGGATGCGCTAAAACGCCATCATGGTGCTGCGCAGGTGACCAATGTTGATGTGCCGGGCCTGGTCGCCGAACTGGCAAACCATCTTTCTCCCTCGCGCCTGCAGGCTATACTGGGGGATGTTTGCCACATTCGTGAACAGTTAATGTCTGTTACAGGCATCAACCGCGAGCTTCTCATCACCGATCTTTTACTGCGTATTGAGCATTACCTGCAACCGGGCGTTGTGCTACCGGTTCCTCATCTTTAA", - "dna_sequence_length": 1005, - "functions": [ - "DNA polymerase III, delta prime subunit" - ], - "id": "CDS_1077", - "location": [ - [ - "NC_000913", - 1155762, - "+", - 1005 - ] - ], - "md5": "7a4580fa33598bb7bdb41c5328a0d2f7", - "parent_gene": "", - "protein_md5": "36013ebcd78237ebe4a2d0204c80604b", - "protein_translation": "MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL", - "protein_translation_length": 334, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003719" - ], - [ - "gene_synonym", - "JW1086" - ], - [ - "gene_synonym", - "GeneID:945656" - ], - [ - "gene_synonym", - "NP_415618.1" - ], - [ - "gene_synonym", - "ECK1086" - ], - [ - "gene_synonym", - "GI:16129063" - ], - [ - "gene_synonym", - "b1100" - ], - [ - "gene_synonym", - "ycfH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFQ7" - ], - [ - "gene_synonym", - "EcoGene:EG12303" - ] - ], - "dna_sequence": "ATGTTTTTAGTCGACTCACACTGCCATCTCGATGGTCTGGATTATGAATCTTTGCATAAGGACGTGGATGACGTTCTGGCGAAAGCCGCCGCACGCGATGTGAAATTTTGTCTGGCAGTCGCCACAACATTACCGGGTTATTTACATATGCGGGATCTGGTAGGCGAACGTGACAACGTCGTATTTTCTTGTGGCGTGCATCCACTCAACCAGAATGATCCCTACGATGTAGAAGATTTACGCCGTCTGGCGGCAGAAGAGGGTGTTGTAGCGCTGGGTGAAACCGGGCTGGATTATTATTACACGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATACCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACAGAGGACAGAGAAACGGCGGGTAAATTACTGGATCTCGGATTTTACATCTCCTTTTCCGGCATTGTGACCTTCCGTAATGCGGAGCAACTGCGCGATGCTGCGCGTTATGTCCCCCTGGATCGGTTACTGGTGGAAACTGACTCACCTTACCTTGCGCCGGTACCGCATCGAGGAAAAGAGAATCAACCTGCGATGGTTCGTGACGTTGCAGAATACATGGCTGTGTTGAAAGGTGTTGCCGTTGAAGAACTGGCGCAGGTAACCACCGATAACTTCGCCCGTCTGTTTCACATCGACGCTTCCCGCCTTCAATCCATCCGTTGA", - "dna_sequence_length": 798, - "functions": [ - "putative DNase" - ], - "id": "CDS_1078", - "location": [ - [ - "NC_000913", - 1156777, - "+", - 798 - ] - ], - "md5": "3110d13f2575d2db478ff48c9270cd5d", - "parent_gene": "", - "protein_md5": "5c96612253d5137046f0005b72e1e632", - "protein_translation": "MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTLPGYLHMRDLVGERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRLQSIR", - "protein_translation_length": 265, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945651" - ], - [ - "gene_synonym", - "ASAP:ABE-0003722" - ], - [ - "gene_synonym", - "JW1087" - ], - [ - "gene_synonym", - "GI:16129064" - ], - [ - "gene_synonym", - "car" - ], - [ - "gene_synonym", - "ECK1087" - ], - [ - "gene_synonym", - "cat" - ], - [ - "gene_synonym", - "b1101" - ], - [ - "gene_synonym", - "EcoGene:EG10787" - ], - [ - "gene_synonym", - "umg" - ], - [ - "gene_synonym", - "umgC" - ], - [ - "gene_synonym", - "tgl" - ], - [ - "gene_synonym", - "NP_415619.1" - ], - [ - "gene_synonym", - "CR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69786" - ], - [ - "gene_synonym", - "glcA" - ], - [ - "gene_synonym", - "ptsG" - ] - ], - "dna_sequence": "ATGTTTAAGAATGCATTTGCTAACCTGCAAAAGGTCGGTAAATCGCTGATGCTGCCGGTATCCGTACTGCCTATCGCAGGTATTCTGCTGGGCGTCGGTTCCGCGAATTTCAGCTGGCTGCCCGCCGTTGTATCGCATGTTATGGCAGAAGCAGGCGGTTCCGTCTTTGCAAACATGCCACTGATTTTTGCGATCGGTGTCGCCCTCGGCTTTACCAATAACGATGGCGTATCCGCGCTGGCCGCAGTTGTTGCCTATGGCATCATGGTTAAAACCATGGCCGTGGTTGCGCCACTGGTACTGCATTTACCTGCTGAAGAAATCGCCTCTAAACACCTGGCGGATACTGGCGTACTCGGAGGGATTATCTCCGGTGCGATCGCAGCGTACATGTTTAACCGTTTCTACCGTATTAAGCTGCCTGAGTATCTTGGCTTCTTTGCCGGTAAACGCTTTGTGCCGATCATTTCTGGCCTGGCTGCCATCTTTACTGGCGTTGTGCTGTCCTTCATTTGGCCGCCGATTGGTTCTGCAATCCAGACCTTCTCTCAGTGGGCTGCTTACCAGAACCCGGTAGTTGCGTTTGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCACCACATCTGGAACGTACCTTTCCAGATGCAGATTGGTGAATACACCAACGCAGCAGGTCAGGTTTTCCACGGCGACATTCCGCGTTATATGGCGGGTGACCCGACTGCGGGTAAACTGTCTGGTGGCTTCCTGTTCAAAATGTACGGTCTGCCAGCTGCCGCAATTGCTATCTGGCACTCTGCTAAACCAGAAAACCGCGCGAAAGTGGGCGGTATTATGATCTCCGCGGCGCTGACCTCGTTCCTGACCGGTATCACCGAGCCGATCGAGTTCTCCTTCATGTTCGTTGCGCCGATCCTGTACATCATCCACGCGATTCTGGCAGGCCTGGCATTCCCAATCTGTATTCTTCTGGGGATGCGTGACGGTACGTCGTTCTCGCACGGTCTGATCGACTTCATCGTTCTGTCTGGTAACAGCAGCAAACTGTGGCTGTTCCCGATCGTCGGTATCGGTTATGCGATTGTTTACTACACCATCTTCCGCGTGCTGATTAAAGCACTGGATCTGAAAACGCCGGGTCGTGAAGACGCGACTGAAGATGCAAAAGCGACAGGTACCAGCGAAATGGCACCGGCTCTGGTTGCTGCATTTGGTGGTAAAGAAAACATTACTAACCTCGACGCATGTATTACCCGTCTGCGCGTCAGCGTTGCTGATGTGTCTAAAGTGGATCAGGCCGGCCTGAAGAAACTGGGCGCAGCGGGCGTAGTGGTTGCTGGTTCTGGTGTTCAGGCGATTTTCGGTACTAAATCCGATAACCTGAAAACCGAGATGGATGAGTACATCCGTAACCACTAA", - "dna_sequence_length": 1434, - "functions": [ - "fused glucose-specific PTS enzymes: IIB component/IIC component" - ], - "id": "CDS_1079", - "location": [ - [ - "NC_000913", - 1157869, - "+", - 1434 - ] - ], - "md5": "172248c5e00080e4a02e8cff95abde76", - "parent_gene": "", - "protein_md5": "bcf0eda5bf6c0577bd8206fa6c2906b2", - "protein_translation": "MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIASKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEYTNAAGQVFHGDIPRYMAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDATEDAKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNH", - "protein_translation_length": 477, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003724" - ], - [ - "gene_synonym", - "NP_415620.1" - ], - [ - "gene_synonym", - "GeneID:945649" - ], - [ - "gene_synonym", - "JW1088" - ], - [ - "gene_synonym", - "GI:16129065" - ], - [ - "gene_synonym", - "fhuE" - ], - [ - "gene_synonym", - "b1102" - ], - [ - "gene_synonym", - "EcoGene:EG10306" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16869" - ], - [ - "gene_synonym", - "ECK1088" - ] - ], - "dna_sequence": "ATGCTTTCAACACAATTTAACAGGGATAATCAATATCAAGCCATCACCAAACCGTCACTACTTGCCGGTTGCATAGCACTGGCACTATTACCTTCTGCCGCTTTTGCTGCACCAGCCACTGAAGAAACGGTGATTGTTGAGGGTTCAGCCACAGCTCCAGATGATGGCGAAAATGATTACAGCGTAACGTCTACCTCTGCGGGTACCAAAATGCAGATGACTCAACGTGATATTCCTCAGTCGGTCACTATTGTTAGCCAGCAGCGGATGGAAGATCAGCAGTTACAAACGCTGGGCGAAGTGATGGAAAACACGCTGGGGATCAGCAAAAGTCAGGCGGATTCCGATCGTGCTCTTTATTATTCCCGCGGATTCCAGATCGATAACTATATGGTTGATGGTATCCCCACCTATTTTGAATCGCGCTGGAATCTGGGCGACGCACTTTCTGATATGGCACTCTTTGAACGCGTAGAAGTAGTGCGTGGCGCGACAGGACTCATGACCGGGACGGGTAATCCATCTGCGGCAATTAATATGGTTCGAAAACACGCGACCAGTCGTGAATTTAAAGGCGATGTCTCGGCGGAATACGGTAGCTGGAACAAAGAACGGTATGTGGCGGATTTACAAAGCCCACTCACCGAAGACGGTAAAATCCGCGCGCGAATTGTCGGCGGCTACCAGAATAACGACTCATGGCTGGACCGCTACAACAGTGAAAAGACCTTCTTCTCGGGCATTGTCGATGCTGATTTAGGCGATCTTACGACGCTTTCAGCCGGTTACGAATATCAGCGCATTGATGTTAATAGCCCTACCTGGGGCGGTTTACCGCGCTGGAATACTGATGGCAGCAGCAACAGTTACGATCGCGCACGCAGTACCGCACCTGACTGGGCGTACAACGATAAAGAGATCAACAAGGTCTTTATGACCCTGAAGCAGCAGTTTGCTGATACCTGGCAAGCGACACTGAATGCCACCCACTCTGAAGTCGAATTTGACAGCAAAATGATGTATGTCGATGCCTATGTAAACAAAGCGGATGGTATGCTGGTTGGGCCATACAGTAATTATGGACCTGGCTTTGATTATGTCGGCGGCACCGGTTGGAACAGTGGCAAACGTAAAGTTGATGCGCTGGATTTGTTCGCTGACGGTAGTTATGAATTGTTTGGTCGTCAGCACAATCTAATGTTTGGTGGCAGTTACAGCAAACAAAACAATCGTTACTTCAGTTCATGGGCCAACATCTTCCCGGATGAAATTGGCAGTTTCTACAACTTTAATGGCAATTTCCCACAAACCGACTGGTCACCACAGAGCCTGGCGCAGGACGATACCACACATATGAAATCGTTATATGCTGCCACTCGTGTCACCCTTGCCGATCCGCTGCATCTGATCCTCGGCGCACGTTATACCAACTGGCGGGTTGATACGCTGACTTACAGCATGGAGAAAAACCACACCACGCCTTACGCTGGTCTGGTGTTTGACATCAATGACAACTGGTCGACCTACGCCAGCTATACCTCTATTTTCCAGCCGCAAAATGATCGTGACAGTTCAGGCAAATATCTGGCTCCAATCACCGGTAACAACTACGAGCTGGGTCTGAAATCGGACTGGATGAATAGCCGTCTGACCACCACGTTAGCCATCTTCCGTATTGAGCAGGATAATGTCGCTCAGTCCACCGGTACACCTATCCCCGGCAGCAACGGCGAAACCGCCTATAAAGCGGTGGATGGGACAGTCAGTAAAGGGGTGGAATTTGAACTCAACGGCGCAATTACCGACAACTGGCAGCTGACATTTGGCGCAACGCGCTATATTGCAGAGGATAACGAAGGAAACGCCGTTAATCCTAATCTGCCACGCACCACGGTTAAAATGTTCACCAGCTATCGGTTGCCTGTCATGCCAGAGTTGACGGTCGGCGGTGGTGTTAACTGGCAAAATCGCGTGTATACCGACACCGTGACGCCGTATGGCACCTTCCGCGCCGAGCAAGGTAGCTACGCGCTGGTGGATCTCTTCACCCGCTACCAGGTGACGAAAAACTTCTCGTTACAGGGGAACGTCAATAACCTGTTCGACAAAACCTACGATACCAACGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGA", 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"MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETVIVEGSATAPDDGENDYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEVVRGATGLMTGTGNPSAAINMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQQFADTWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLILGARYTNWRVDTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNVEGSIVYGTPRNFSITGTYQF", - "protein_translation_length": 729, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1089" - ], - [ - "gene_synonym", - "NP_415621.3" - ], - [ - "gene_synonym", - "hinT" - ], - [ - "gene_synonym", - "JW1089" - ], - [ - "gene_synonym", - "EcoGene:EG12172" - ], - [ - "gene_synonym", - "ASAP:ABE-0003729" - ], - [ - "gene_synonym", - "GI:49176077" - ], - [ - "gene_synonym", - "b1103" - ], - [ - "gene_synonym", - "ycfF" - ], - [ - "gene_synonym", - "GeneID:948549" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACE7" - ] - ], - "dna_sequence": "GTGGCAGAAGAAACTATATTCAGCAAAATTATTCGTCGTGAGATCCCCTCCGATATCGTCTACCAGGATGATCTGGTAACGGCGTTTCGCGATATTTCGCCGCAAGCGCCAACGCATATTCTGATCATTCCGAATATCCTCATTCCGACTGTGAACGACGTCTCAGCTGAGCATGAGCAGGCGCTGGGACGCATGATCACCGTAGCGGCAAAAATTGCTGAGCAAGAAGGTATTGCCGAAGATGGCTATCGTCTGATCATGAATACCAACCGCCATGGCGGACAAGAGGTTTACCACATCCATATGCACTTGTTGGGTGGCCGTCCGCTGGGACCAATGCTGGCGCATAAAGGTCTGTAA", - "dna_sequence_length": 360, - "functions": [ - "purine nucleoside phosphoramidase, dadA activator protein" - ], - "id": "CDS_1081", - "location": [ - [ - "NC_000913", - 1161885, - "+", - 360 - ] - ], - "md5": "8c4044a71c97b4a6462c275aedb31ca7", - "parent_gene": "", - "protein_md5": "5ec0a5dd41b1ecfa4c370d803bcc79d4", - "protein_translation": "MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAHKGL", - "protein_translation_length": 119, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003731" - ], - [ - "gene_synonym", - "GeneID:948539" - ], - [ - "gene_synonym", - "ECK1090" - ], - [ - "gene_synonym", - "GI:16129067" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75946" - ], - [ - "gene_synonym", - "JW1090" - ], - [ - "gene_synonym", - "NP_415622.1" - ], - [ - "gene_synonym", - "ycfL" - ], - [ - "gene_synonym", - "b1104" - ], - [ - "gene_synonym", - "EcoGene:EG13430" - ] - ], - "dna_sequence": "ATGAGAAAAGGATGCTTTGGGCTGGTGTCTCTGGTGTTGTTACTGCTGGTGGGCTGTCGTTCACATCCGGAAATTCCGGTGAATGATGAGCAATCGCTGGTGATGGAGTCATCTTTATTGGCTGCGGGCATCAGTGCAGAAAAGCCCTTCCTTTCGACGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGTTCATTATCGTTTTTACTGGTATGACGCCAGAGGGCTGGAGATGCATCCTCTGGAAAGGCCACGCAGCGTTACCATTCCCGCACATTCGGCGGTAACGCTGTACGGCAGCGCCAATTTTCTGGGGGCGCACAAAGTCAGACTTTATCTATATTTGTAA", - "dna_sequence_length": 378, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1082", - "location": [ - [ - "NC_000913", - 1162247, - "+", - 378 - ] - ], - "md5": "8d3342475a04de7945d0d7265d27b37c", - "parent_gene": "", - "protein_md5": "49abb01d1a4ae381d598799580d8c3fa", - "protein_translation": "MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGISAEKPFLSTSDIQPSASSTLYNERQEPVTVHYRFYWYDARGLEMHPLERPRSVTIPAHSAVTLYGSANFLGAHKVRLYLYL", - "protein_translation_length": 125, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003733" - ], - [ - "gene_synonym", - "GI:16129068" - ], - [ - "gene_synonym", - "ECK1091" - ], - [ - "gene_synonym", - "EcoGene:EG13431" - ], - [ - "gene_synonym", - "ycfM" - ], - [ - "gene_synonym", - "b1105" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB38" - ], - [ - "gene_synonym", - "NP_415623.1" - ], - [ - "gene_synonym", - "JW5157" - ], - [ - "gene_synonym", - "GeneID:948536" - ], - [ - "gene_synonym", - "lpoB" - ] - ], - "dna_sequence": "ATGACAAAAATGAGTCGCTACGCCTTGATTACCGCGCTGGCGATGTTTCTCGCCGGGTGTGTGGGGCAACGTGAACCTGCACCGGTAGAAGAAGTGAAACCAGCGCCGGAACAACCAGCCGAGCCACAACAGCCTGTCCCCACAGTGCCCTCGGTGCCGACGATCCCGCAGCAGCCAGGCCCAATTGAGCACGAAGATCAAACTGCACCGCCTGCGCCGCATATTCGCCATTATGACTGGAATGGCGCAATGCAGCCGATGGTCAGTAAGATGCTTGGGGCTGACGGGGTGACTGCGGGTAGCGTCCTGCTGGTTGATAGCGTTAACAACCGTACTAACGGTTCGCTGAATGCCGCAGAAGCGACCGAAACGCTGCGAAATGCGCTGGCTAATAACGGGAAATTTACCCTGGTTTCCGCCCAGCAACTGTCGATGGCGAAGCAACAGTTAGGTTTGTCGCCGCAGGACAGTTTAGGCACCCGTAGTAAAGCCATAGGCATTGCCCGCAATGTCGGCGCTCATTACGTGCTGTACTCCAGCGCCTCTGGCAACGTTAACGCTCCGACCCTACAAATGCAGCTGATGCTGGTGCAGACGGGCGAAATTATCTGGTCAGGTAAAGGTGCCGTTTCGCAGCAATAA", - "dna_sequence_length": 642, - "functions": [ - "OM lipoprotein stimulator of MrcB transpeptidase" - ], - "id": "CDS_1083", - "location": [ - [ - "NC_000913", - 1162638, - "+", - 642 - ] - ], - "md5": "fef271430b5d157435b95c72f5f194b4", - "parent_gene": "", - "protein_md5": "c65ae3b77f5a90c598beb8fb073593d0", - "protein_translation": "MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGPIEHEDQTAPPAPHIRHYDWNGAMQPMVSKMLGADGVTAGSVLLVDSVNNRTNGSLNAAEATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGTRSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQQ", - "protein_translation_length": 213, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ycfN" - ], - [ - "gene_synonym", - "ASAP:ABE-0003735" - ], - [ - "gene_synonym", - "GI:16129069" - ], - [ - "gene_synonym", - "NP_415624.1" - ], - [ - "gene_synonym", - "ECK1092" - ], - [ - "gene_synonym", - "JW1092" - ], - [ - "gene_synonym", - "thiK" - ], - [ - "gene_synonym", - "b1106" - ], - [ - "gene_synonym", - "GeneID:948525" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75948" - ], - [ - "gene_synonym", - "EcoGene:EG13432" - ] - ], - "dna_sequence": "GTGCCGTTTCGCAGCAATAATCCCATCACGCGCGACGAATTGCTGTCGCGCTTTTTCCCGCAGTATCATCCCGTCACGACGTTTAATAGTGGGCTTAGTGGCGGGAGTTTTCTCATTGAACATCAGGGCCAGCGTTTTGTTGTGCGTCAGCCGCACGATCCTGATGCGCCGCAGTCCGCGTTCTTGCGCCAGTATCGGGCTTTATCACAACTACCCGCATGCATTGCACCGAAGCCGCATTTATATCTCCGTGACTGGATGGTAGTCGACTATCTGCCCGGCGCGGTAAAAACGTATTTGCCGGATACCAACGAACTGGCAGGCTTGCTGTATTATCTACATCAACAACCACGTTTTGGCTGGCGAATAACGCTGTTGCCGTTACTGGAACTGTACTGGCAGCAAAGCGATCCGGCGCGGCGGACAGTGGGTTGGCTGCGAATGTTAAAACGTCTGCGCAAAGCGCGGGAACCACGGCCTTTACGCTTAAGTCCATTGCATATGGATGTCCACGCCGGAAATTTAGTGCATAGCGCGTCAGGGTTAAAACTCATCGACTGGGAGTATGCCGGAGATGGTGATATCGCGCTGGAACTGGCGGCGGTGTGGGTGGAAAATACTGAACAGCACCGGCAATTGGTCAATGACTATGCCACTCGCGCGAAGATTTATCCGGCGCAATTATGGCGTCAGGTCAGGCGATGGTTTCCCTGGCTGCTGATGCTCAAAGCAGGGTGGTTTGAGTACCGCTGGCGACAAACCGGCGATCAACAATTTATCAGGCTGGCCGATGACACCTGGCGGCAGCTATTAATAAAACAATAA", - "dna_sequence_length": 825, - "functions": [ - "thiamine kinase" - ], - "id": "CDS_1084", - "location": [ - [ - "NC_000913", - 1163260, - "+", - 825 - ] - ], - "md5": "dc5bf1e25d6ab9fb57e31e40b78d3433", - "parent_gene": "", - "protein_md5": "2f1d8892182c2bdc8ee494ff7b806976", - "protein_translation": "MPFRSNNPITRDELLSRFFPQYHPVTTFNSGLSGGSFLIEHQGQRFVVRQPHDPDAPQSAFLRQYRALSQLPACIAPKPHLYLRDWMVVDYLPGAVKTYLPDTNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRPLRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDIALELAAVWVENTEQHRQLVNDYATRAKIYPAQLWRQVRRWFPWLLMLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ", - "protein_translation_length": 274, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003737" - ], - [ - "gene_synonym", - "GeneID:945671" - ], - [ - "gene_synonym", - "nagZ" - ], - [ - "gene_synonym", - "ECK1093" - ], - [ - "gene_synonym", - "JW1093" - ], - [ - "gene_synonym", - "GI:16129070" - ], - [ - "gene_synonym", - "ycfO" - ], - [ - "gene_synonym", - "b1107" - ], - [ - "gene_synonym", - "NP_415625.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75949" - ], - [ - "gene_synonym", - "EcoGene:EG13433" - ] - ], - "dna_sequence": "GTGGGTCCAGTAATGTTGGATGTCGAAGGTTACGAACTGGACGCGGAAGAGCGTGAAATACTGGCGCATCCGCTGGTGGGAGGGCTGATTCTCTTTACGCGTAACTATCATGATCCTGCCCAGTTACGTGAACTGGTGCGCCAGATCCGCGCAGCTTCGCGCAATCGTCTGGTGGTGGCGGTTGATCAGGAAGGTGGACGCGTGCAGCGTTTTCGTGAAGGTTTTACCCGCTTGCCAGCGGCGCAATCATTCGCTGCGCTGTCAGGAATGGAAGAGGGTGGCAAACTGGCGCAGGAGGCAGGTTGGTTGATGGCCAGCGAAATGATCGCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGCATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTCCTTAATCCGCGAAAATAAACTCGACGCCATTATGCCTGCGCATGTGATCTACAGTGATGTTGATCCGCGTCCGGCGAGCGGTTCTCCCTACTGGCTGAAAACCGTTTTGCGTCAGGAACTGGGTTTTGACGGCGTGATTTTCTCTGACGATTTATCGATGGAAGGTGCCGCGATTATGGGCAGTTATGCCGAACGCGGGCAGGCTTCACTGGATGCGGGTTGCGATATGATCCTGGTCTGCAATAATCGTAAAGGGGCCGTCAGCGTGTTAGATAATCTGTCACCGATCAAGGCAGAACGTGTTACACGTTTGTATCATAAAGGTTCATTTTCGCGACAGGAACTGATGGACTCGGCTCGCTGGAAAGCGATCAGCACCCGTCTGAATCAGTTACATGAACGCTGGCAGGAAGAGAAAGCAGGTCACTAA", - "dna_sequence_length": 1026, - "functions": [ - "beta N-acetyl-glucosaminidase" - ], - "id": "CDS_1085", - "location": [ - [ - "NC_000913", - 1164095, - "+", - 1026 - ] - ], - "md5": "01344594e3c4b50ba89ad05a78a7d928", - "parent_gene": "", - "protein_md5": "61dc5548ff15eaa6a4612a4e8ee00260", - "protein_translation": "MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRELVRQIRAASRNRLVVAVDQEGGRVQRFREGFTRLPAAQSFAALSGMEEGGKLAQEAGWLMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPQKALAIASRFIDGMHEAGMKTTGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSSLIRENKLDAIMPAHVIYSDVDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKAISTRLNQLHERWQEEKAGH", - "protein_translation_length": 341, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945676" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8E1" - ], - [ - "gene_synonym", - "ECK1094" - ], - [ - "gene_synonym", - "ycfP" - ], - [ - "gene_synonym", - "NP_415626.4" - ], - [ - "gene_synonym", - "GI:90111213" - ], - [ - "gene_synonym", - "JW5158" - ], - [ - "gene_synonym", - "EcoGene:EG13434" - ], - [ - "gene_synonym", - "b1108" - ], - [ - "gene_synonym", - "ASAP:ABE-0003740" - ] - ], - "dna_sequence": "ATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCCGAAACATGATATGCAGCATCTGCTTAAAGAAGTGGACAAAATGTTGCAACTGAACGTTGACGAGCGTCCGCTAATTTGCGGCGTTGGCTTGGGCGGATACTGGGCGGAACGGATTGGTTTTCTTTGCGACATCCGCCAGGTGATCTTCAACCCTAATTTGTTCCCTTATGAGAACATGGAAGGCAAGATTGATCGCCCGGAAGAGTATGCCGATATTGCCACTAAGTGTGTGACCAACTTCCGTGAGAAGAATCGCGATCGTTGCCTGGTGATTTTGTCGCGTAATGATGAAGCGCTTAACAGCCAGCGGACATCTGAAGAGTTGCATCATTATTACGAGATTGTCTGGGACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAA", - "dna_sequence_length": 543, - "functions": [ - "putative UPF0227 family esterase" - ], - "id": "CDS_1086", - "location": [ - [ - "NC_000913", - 1165143, - "+", - 543 - ] - ], - "md5": "6b8e8e1d149fd2e060fa444603a9b2fd", - "parent_gene": "", - "protein_md5": "6d811a959a23ed1a3377425992e348e2", - "protein_translation": "MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQTHKFKNISPHLQRIKAFKTLG", - "protein_translation_length": 180, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ndh" - ], - [ - "gene_synonym", - "NP_415627.1" - ], - [ - "gene_synonym", - "JW1095" - ], - [ - "gene_synonym", - "EcoGene:EG10649" - ], - [ - "gene_synonym", - "ECK1095" - ], - [ - "gene_synonym", - "GI:16129072" - ], - [ - "gene_synonym", - "ASAP:ABE-0003746" - ], - [ - "gene_synonym", - "GeneID:946792" - ], - [ - "gene_synonym", - "b1109" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00393" - ] - ], - "dna_sequence": "TTGACTACGCCATTGAAAAAGATTGTGATTGTCGGCGGCGGTGCTGGTGGGCTGGAAATGGCAACACAGCTGGGGCATAAGCTGGGACGCAAGAAAAAAGCCAAAATTACGCTGGTCGATCGTAACCACAGCCACCTGTGGAAACCGCTGCTGCACGAAGTGGCGACTGGCTCGCTTGATGAAGGCGTCGATGCGTTGAGCTATCTGGCCCATGCGCGCAATCATGGTTTCCAGTTCCAGCTGGGTTCCGTCATTGATATTGATCGTGAAGCGAAAACAATCACTATTGCAGAACTGCGCGACGAGAAAGGTGAACTGCTGGTTCCGGAACGTAAAATCGCCTATGACACCCTGGTAATGGCGCTGGGTAGCACCTCTAACGATTTCAATACGCCAGGTGTCAAAGAGAACTGCATTTTCCTCGATAACCCGCACCAGGCGCGTCGCTTCCACCAGGAGATGCTGAATTTGTTCCTGAAATACTCCGCCAACCTGGGCGCGAATGGCAAAGTGAACATTGCGATTGTCGGCGGCGGCGCGACGGGTGTAGAACTCTCCGCTGAATTGCACAACGCGGTCAAGCAACTGCACAGCTACGGTTACAAAGGCCTGACCAACGAAGCCCTGAACGTAACGCTGGTAGAAGCGGGAGAACGTATTTTGCCTGCGTTACCGCCACGTATCTCTGCTGCGGCCCACAACGAGCTAACGAAACTTGGCGTTCGCGTGCTGACGCAAACCATGGTCACCAGTGCTGATGAAGGCGGCCTGCACACTAAAGATGGCGAATATATTGAGGCTGATCTGATGGTATGGGCAGCCGGGATCAAAGCGCCAGACTTCCTGAAAGATATCGGTGGTCTTGAAACTAACCGTATCAACCAGCTGGTGGTGGAACCGACGCTGCAAACCACCCGCGATCCAGACATTTACGCTATTGGCGACTGCGCGTCATGCCCGCGTCCGGAAGGGGGCTTTGTTCCGCCGCGTGCTCAGGCTGCACACCAGATGGCGACTTGCGCAATGAACAACATTCTGGCGCAGATGAACGGTAAGCCGCTGAAAAATTATCAGTATAAAGATCATGGTTCGCTGGTATCGCTGTCGAACTTCTCCACCGTCGGTAGCCTGATGGGTAACCTGACGCGCGGCTCAATGATGATTGAAGGACGAATTGCGCGCTTTGTATATATCTCGCTATACCGAATGCATCAGATTGCGCTGCATGGTTACTTTAAAACCGGATTAATGATGCTGGTGGGGAGTATTAACCGCGTTATCCGTCCGCGTTTGAAGTTGCATTAA", - "dna_sequence_length": 1305, - "functions": [ - "respiratory NADH dehydrogenase 2/cupric reductase" - ], - "id": "CDS_1087", - "location": [ - [ - "NC_000913", - 1166085, - "+", - 1305 - ] - ], - "md5": "eec257f6258f2abd54e174430246facb", - "parent_gene": "", - "protein_md5": "d24034b9ace40a5fd0c0a6d3c8ec0e21", - "protein_translation": "MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHSHLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDEKGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLKYSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGERILPALPPRISAAAHNELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGIKAPDFLKDIGGLETNRINQLVVEPTLQTTRDPDIYAIGDCASCPRPEGGFVPPRAQAAHQMATCAMNNILAQMNGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRIARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH", - "protein_translation_length": 434, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945977" - ], - [ - "gene_synonym", - "ASAP:ABE-0003752" - ], - [ - "gene_synonym", - "JW1096" - ], - [ - "gene_synonym", - "GI:16129073" - ], - [ - "gene_synonym", - "ECK1096" - ], - [ - "gene_synonym", - "b1110" - ], - [ - "gene_synonym", - "ycfJ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB35" - ], - [ - "gene_synonym", - "NP_415628.1" - ], - [ - "gene_synonym", - "EcoGene:EG12444" - ] - ], - "dna_sequence": "GTGAATAAATCAATGTTGGCGGGTATCGGGATTGGTGTCGCAGCTGCGCTGGGCGTAGCGGCAGTGGCCAGTCTGAACGTGTTTGAACGGGGCCCGCAATACGCTCAGGTTGTTTCTGCAACCCCAATCAAGGAAACGGTTAAAACACCGCGTCAGGAGTGTCGCAACGTCACAGTGACCCATCGTCGACCGGTGCAGGATGAAAATCGCATTACCGGGTCGGTGCTCGGCGCTGTTGCTGGCGGCGTGATAGGGCATCAGTTTGGTGGTGGTCGCGGTAAAGATGTCGCCACTGTTGTGGGGGCGCTGGGTGGTGGATATGCCGGTAACCAGATCCAGGGCTCTCTCCAGGAAAGCGATACTTACACGACTACGCAACAGCGTTGTAAAACGGTGTATGACAAGTCAGAAAAAATGCTCGGTTATGATGTGACCTATAAGATTGGCGATCAGCAGGGCAAAATCCGCATGGACCGCGATCCGGGTACGCAGATCCCGCTAGATAGCAACGGGCAACTGATTTTGAATAACAAAGTATAA", - "dna_sequence_length": 540, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1088", - "location": [ - [ - "NC_000913", - 1167599, - "+", - 540 - ] - ], - "md5": "639a24cda394f9b129b6b23eb5c8afae", - "parent_gene": "", - "protein_md5": "0bb9fe6df56d7fe4c9a6d6613406f3d5", - "protein_translation": "MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIKETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRDPGTQIPLDSNGQLILNNKV", - "protein_translation_length": 179, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003754" - ], - [ - "gene_synonym", - "GeneID:947425" - ], - [ - "gene_synonym", - "ECK1097" - ], - [ - "gene_synonym", - "b1111" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75952" - ], - [ - "gene_synonym", - "GI:90111214" - ], - [ - "gene_synonym", - "ycfQ" - ], - [ - "gene_synonym", - "EcoGene:EG13435" - ], - [ - "gene_synonym", - "NP_415629.4" - ], - [ - "gene_synonym", - "JW5159" - ] - ], - "dna_sequence": "ATGGCAACTGACTCAACACAATGTGTAAAAAAAAGCCGTGGCCGCCCAAAAGTGTTCGACAGGGATGCCGCGCTTGATAAGGCCATGAAATTGTTCTGGCAACACGGTTATGAAGCGACTTCTCTTGCGGACCTCGTCGAAGCGACCGGAGCCAAAGCGCCCACGCTATACGCGGAATTTACCAACAAAGAGGGGTTATTTCGTGCCGTTCTCGACCGCTATATCGATCGTTTTGCCGCTAAGCATGAAGCACAGCTGTTTTGTGAAGAGAAAAGCGTGGAGTCTGCGCTGGCTGACTATTTTGCTGCCATCGCCAACTGCTTTACCAGCAAAGACACCCCGGCAGGCTGCTTCATGATCAACAACTGCACCACCCTCTCCCCAGATTCAGGAGATATCGCCAATACGTTGAAATCACGCCATGCGATGCAAGAGCGCACTTTGCAGCAGTTTTTATGTCAACGACAAGCGCGCGGGGAAATCCCGCCCCACTGTGACGTGACACATCTGGCAGAATTCCTTAATTGTATTATTCAGGGGATGTCGATCAGCGCACGCGAAGGTGCATCGCTGGAAAAACTGATGCAGATTGCCGGAACGACTTTGCGTTTATGGCCCGAACTGGTGAAATAA", - "dna_sequence_length": 633, - "functions": [ - "repressor for bhsA(ycfR)" - ], - "id": "CDS_1089", - "location": [ - [ - "NC_000913", - 1168832, - "-", - 633 - ] - ], - "md5": "5c54302bab3d4dba196965f7ee6864c5", - "parent_gene": "", - "protein_md5": "81001b797bbba7ea9a7f1a2a88c3f213", - "protein_translation": "MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGEIPPHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK", - "protein_translation_length": 210, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1098" - ], - [ - "gene_synonym", - "GeneID:945492" - ], - [ - "gene_synonym", - "JW1098" - ], - [ - "gene_synonym", - "ASAP:ABE-0003758" - ], - [ - "gene_synonym", - "GI:16129075" - ], - [ - "gene_synonym", - "ycfR" - ], - [ - "gene_synonym", - "bhsA" - ], - [ - "gene_synonym", - "b1112" - ], - [ - "gene_synonym", - "NP_415630.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB40" - ], - [ - "gene_synonym", - "EcoGene:EG13436" - ] - ], - "dna_sequence": "ATGAAAAACGTAAAAACCCTCATCGCTGCGGCGATTTTAAGCTCCATGTCATTTGCCAGCTTTGCGGCTGTCGAAGTTCAGTCAACGCCAGAAGGCCAACAAAAAGTCGGTACAATCAGTGCTAACGCGGGGACAAATCTGGGATCGCTGGAAGAGCAGCTGGCGCAAAAAGCGGATGAGATGGGCGCAAAATCTTTCCGTATTACTTCTGTAACCGGTCCGAATACCCTCCATGGAACAGCAGTAATTTATAAATAA", - "dna_sequence_length": 258, - "functions": [ - "biofilm, cell surface and signaling protein" - ], - "id": "CDS_1090", - "location": [ - [ - "NC_000913", - 1169073, - "+", - 258 - ] - ], - "md5": "fd3eafc50c6f7e0843e28a8736405e25", - "parent_gene": "", - "protein_md5": "73b02d4ad99a424c0b72a434a130c16e", - "protein_translation": "MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISANAGTNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGTAVIYK", - "protein_translation_length": 85, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1099" - ], - [ - "gene_synonym", - "EcoGene:EG13437" - ], - [ - "gene_synonym", - "NP_415631.1" - ], - [ - "gene_synonym", - "GI:16129076" - ], - [ - "gene_synonym", - "ycfS" - ], - [ - "gene_synonym", - "GeneID:945666" - ], - [ - "gene_synonym", - "b1113" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75954" - ], - [ - "gene_synonym", - "ASAP:ABE-0003760" - ], - [ - "gene_synonym", - "JW5820" - ], - [ - "gene_synonym", - "ldtC" - ] - ], - "dna_sequence": "GTGATGATCAAAACGCGTTTTTCTCGCTGGCTAACGTTTTTTACGTTCGCCGCTGCCGTGGCGCTGGCGCTACCGGCAAAAGCCAACACCTGGCCGCTGCCGCCAGCGGGCAGTCGTCTGGTTGGCGAAAACAAATTTCATGTGGTGGAAAATGACGGTGGTTCTCTGGAAGCCATCGCCAAAAAATACAACGTCGGCTTTCTCGCTCTGTTACAGGCTAACCCCGGCGTTGATCCTTACGTACCGCGCGCGGGCAGCGTGTTAACGATCCCGTTGCAAACCCTACTTCCAGATGCGCCGCGCGAAGGCATTGTGATCAACATTGCGGAGCTGCGTCTCTATTACTACCCGCCGGGTAAAAATTCGGTAACCGTGTATCCAATAGGTATTGGTCAGTTAGGTGGTGACACGCTGACACCGACAATGGTGACCACCGTTTCAGACAAACGTGCAAACCCAACCTGGACGCCAACGGCAAACATCCGCGCCCGTTATAAAGCACAGGGAATTGAGTTGCCTGCGGTAGTGCCGGCTGGACTGGATAACCCAATGGGCCATCATGCGATTCGTCTGGCGGCCTATGGCGGCGTTTATTTGCTTCATGGTACGAACGCCGATTTCGGCATTGGCATGCGGGTAAGTTCTGGCTGTATTCGTCTGCGGGATGACGATATCAAAACACTCTTTAGCCAGGTCACCCCAGGCACCAAAGTGAATATCATCAACACTCCGATAAAAGTCTCTGCCGAACCAAACGGTGCGCGTCTGGTTGAAGTACATCAGCCGCTGTCAGAGAAGATTGATGACGATCCGCAGCTGCTGCCAATTACGCTGAATAGCGCAATGCAATCATTTAAAGATGCAGCACAAACTGACGCTGAAGTGATGCAACATGTGATGGATGTCCGTTCCGGGATGCCGGTGGATGTCCGCCGTCATCAAGTGAGCCCACAAACGCTGTAA", - "dna_sequence_length": 963, - "functions": [ - "L,D-transpeptidase linking Lpp to murein" - ], - "id": "CDS_1091", - "location": [ - [ - "NC_000913", - 1170374, - "-", - 963 - ] - ], - "md5": "a7168ca2231d6aafb1ce65ca286e5870", - "parent_gene": "", - "protein_md5": "ada6452fdc3320c50c966f10e7cc237c", - "protein_translation": "MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGLDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNIINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL", - "protein_translation_length": 320, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1100" - ], - [ - "gene_synonym", - "mfd" - ], - [ - "gene_synonym", - "NP_415632.1" - ], - [ - "gene_synonym", - "GI:16129077" - ], - [ - "gene_synonym", - "ECK1100" - ], - [ - "gene_synonym", - "EcoGene:EG11619" - ], - [ - "gene_synonym", - "GeneID:945681" - ], - [ - "gene_synonym", - "b1114" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30958" - ], - [ - "gene_synonym", - "ASAP:ABE-0003763" - ] - ], - "dna_sequence": "ATGCCTGAACAATATCGTTATACGCTGCCCGTCAAAGCGGGTGAGCAGCGTCTGCTGGGCGAGTTAACCGGCGCAGCCTGTGCAACGCTGGTAGCGGAAATTGCCGAACGTCACGCCGGTCCGGTGGTACTCATTGCACCAGATATGCAAAATGCTCTGCGTTTGCATGATGAAATCAGCCAGTTTACCGATCAAATGGTGATGAATCTGGCGGACTGGGAAACTCTTCCCTACGACAGTTTTTCGCCTCATCAGGACATTATCTCCTCGCGCCTTTCCACCCTTTACCAGCTACCGACGATGCAGCGTGGCGTACTGATTGTTCCGGTGAATACGCTTATGCAGCGCGTTTGCCCACACAGTTTTCTCCACGGTCATGCGCTGGTGATGAAAAAAGGTCAGCGCCTGTCACGAGATGCATTACGAACCCAACTGGACAGCGCCGGTTATCGCCATGTTGACCAGGTGATGGAGCACGGCGAATACGCCACGCGCGGCGCGTTGCTGGATCTCTTCCCGATGGGGAGTGAGCTGCCTTATCGTCTTGATTTCTTTGATGATGAAATCGACAGCCTGCGGGTGTTTGACGTCGACAGCCAGCGCACGCTGGAGGAAGTAGAAGCGATCAATCTGCTGCCCGCGCACGAATTTCCGACCGATAAAGCGGCAATTGAACTGTTCCGCAGCCAGTGGCGCGATACCTTCGAAGTGAAGCGCGATCCAGAACATATTTACCAGCAAGTGAGTAAAGGCACATTACCTGCCGGGATCGAGTACTGGCAGCCATTGTTCTTCAGCGAACCACTGCCGCCGCTGTTCAGTTATTTCCCTGCCAATACCTTGCTCGTGAATACTGGCGATCTGGAAACCAGTGCCGAACGTTTCCAGGCTGACACGCTGGCGCGTTTTGAGAATCGCGGCGTCGATCCGATGCGCCCGCTGTTGCCACCACAATCGCTCTGGCTGCGGGTGGACGAGCTCTTCTCAGAGCTGAAAAACTGGCCCCGGGTGCAGCTAAAAACTGAACATTTACCGACAAAAGCCGCGAATGCCAATTTAGGTTTCCAGAAACTGCCAGACCTGGCCGTTCAGGCACAACAAAAAGCGCCGCTGGATGCGCTGCGTAAGTTCCTCGAGACTTTCGACGGTCCGGTGGTGTTCTCGGTAGAAAGTGAAGGTCGCCGTGAAGCGCTGGGTGAACTGCTCGCACGAATTAAAATTGCTCCGCAACGCATTATGCGTCTTGATGAAGCCAGCGACCGTGGGCGTTATCTGATGATTGGCGCTGCCGAACATGGTTTTGTCGATACGGTGCGTAATCTGGCGCTGATTTGCGAAAGCGATCTGCTCGGTGAACGCGTTGCCCGTCGTCGTCAGGATTCTCGCCGCACCATCAACCCCGATACACTGATCCGTAACCTTGCGGAACTGCATATTGGTCAGCCGGTGGTCCATCTGGAGCACGGCGTCGGTCGTTATGCCGGAATGACCACGCTGGAAGCGGGTGGCATTACTGGCGAGTATCTGATGCTCACCTATGCCAACGACGCCAAACTGTATGTTCCGGTGTCGTCACTGCATCTGATTAGCCGTTACGCAGGTGGCGCGGAAGAAAACGCCCCGCTGCATAAACTTGGCGGCGATGCGTGGTCACGCGCGCGGCAGAAAGCGGCGGAAAAAGTGCGTGATGTGGCGGCGGAATTGCTGGATATCTACGCGCAACGCGCCGCCAAAGAGGGCTTCGCGTTTAAACACGATCGTGAGCAGTATCAGTTGTTCTGCGACAGCTTCCCGTTTGAAACCACGCCGGATCAGGCGCAGGCCATTAATGCGGTACTTAGCGACATGTGTCAGCCGCTGGCAATGGATCGTCTGGTGTGCGGCGATGTTGGCTTTGGTAAAACAGAAGTGGCGATGCGCGCAGCTTTCCTGGCAGTAGATAACCACAAGCAGGTGGCGGTGCTGGTGCCTACCACCCTTCTCGCGCAGCAGCATTACGACAACTTCCGCGACCGTTTCGCCAACTGGCCGGTACGTATCGAAATGATCTCCCGTTTCCGCAGCGCCAAAGAGCAGACGCAAATCCTTGCGGAAGTGGCGGAAGGGAAAATCGATATTCTGATCGGTACGCACAAACTGCTGCAAAGTGACGTCAAGTTTAAAGATTTAGGCCTGCTGATTGTCGATGAAGAACACCGCTTCGGGGTGCGTCATAAAGAGCGCATTAAAGCGATGCGCGCGAACGTGGATATTCTGACGCTTACTGCAACGCCGATCCCACGTACGCTGAATATGGCAATGAGCGGAATGCGTGACCTGTCGATTATCGCCACGCCGCCCGCCCGTCGTCTGGCAGTTAAAACCTTTGTCCGTGAGTATGACAGCATGGTGGTCCGGGAGGCGATCCTGCGTGAAATTTTGCGCGGAGGACAGGTTTATTATCTCTACAATGATGTGGAAAACATTCAGAAAGCCGCCGAACGGCTGGCAGAACTGGTGCCAGAAGCGCGGATCGCCATCGGTCACGGGCAGATGCGCGAGCGCGAACTGGAACGGGTGATGAATGATTTCCATCATCAACGTTTCAACGTGCTGGTTTGTACAACCATTATCGAAACCGGGATCGACATCCCGACAGCCAACACTATTATCATTGAACGCGCGGATCACTTCGGTCTGGCGCAGCTGCACCAGTTACGCGGTCGCGTCGGACGTTCGCATCATCAGGCATATGCATGGTTGCTGACACCGCATCCAAAAGCGATGACTACCGATGCACAAAAACGTCTTGAAGCAATTGCCTCGCTGGAAGATCTCGGGGCAGGTTTTGCGCTGGCAACGCACGATCTGGAGATTCGCGGCGCGGGTGAACTGCTTGGCGAAGAACAAAGCGGCTCAATGGAAACCATCGGTTTCTCGCTGTATATGGAGTTGCTGGAAAACGCCGTCGATGCACTGAAAGCCGGACGCGAGCCGTCGCTGGAAGATCTCACCAGCCAGCAAACAGAAGTCGAGCTGCGGATGCCGTCGCTATTGCCAGATGATTTCATCCCTGACGTGAACACGCGTCTGTCGTTCTACAAACGTATTGCCAGCGCCAAAACGGAAAACGAACTGGAAGAGATCAAAGTCGAGCTTATCGATCGCTTCGGCCTGCTGCCAGATCCGGCGCGTACCCTGCTGGATATTGCCCGTCTGCGCCAGCAAGCGCAGAAACTGGGGATCAGGAAGCTGGAAGGTAATGAGAAAGGCGGGGTGATCGAATTTGCCGAGAAGAATCACGTTAATCCGGCCTGGTTGATTGGTTTGCTGCAAAAACAGCCGCAGCATTACCGCCTTGATGGTCCGACGCGCCTGAAATTTATTCAGGATTTGAGTGAGCGGAAAACGCGTATCGAATGGGTACGCCAGTTTATGCGTGAACTGGAAGAGAACGCGATCGCTTAA", - "dna_sequence_length": 3447, - "functions": [ - "transcription-repair coupling factor" - ], - "id": "CDS_1092", - "location": [ - [ - "NC_000913", - 1173964, - "-", - 3447 - ] - ], - "md5": "d9a7f225058c2a41859893c9d019fe09", - "parent_gene": "", - "protein_md5": "96fea58ba2ef4705cd435180e0c05fe7", - "protein_translation": "MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESEGRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDTVRNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSMVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIEFAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENAIA", - "protein_translation_length": 1148, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1101" - ], - [ - "gene_synonym", - "NP_415633.1" - ], - [ - "gene_synonym", - "GI:16129078" - ], - [ - "gene_synonym", - "ycfT" - ], - [ - "gene_synonym", - "ECK1101" - ], - [ - "gene_synonym", - "GeneID:945679" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75955" - ], - [ - "gene_synonym", - "EcoGene:EG13438" - ], - [ - "gene_synonym", - "b1115" - ], - [ - "gene_synonym", - "ASAP:ABE-0003767" - ] - ], - "dna_sequence": "ATGAAACAAAAAGAGCTATGGATTAACCAGATCAAAGGGTTATGTATTTGTCTGGTGGTGATTTATCACTCGGTCATTACCTTTTATCCGCATCTGACCACTTTTCAGCATCCGTTATCGGAAGTCCTGAGCAAATGCTGGATCTATTTCAATCTTTACCTTGCCCCCTTTCGTATGCCGGTTTTTTTCTTTATATCCGGCTATTTGATTCGCCGCTATATCGACAGCGTACCGTGGGGAAATTGTCTCGATAAACGGATCTGGAACATCTTCTGGGTGCTGGCGCTTTGGGGCGTGGTGCAGTGGCTGGCGTTAAGTGCGCTGAACCAGTGGCTGGCACCTGAGCGCGATTTAAGCAATGCCTCCAATGCCGCTTATGCCGATTCCACCGGTGAGTTCCTGCACGGGATGATCACCGCCAGCACCAGCTTGTGGTATCTGTATGCGTTAATTGTCTATTTCGTGGTATGTAAAATTTTTAGCCGTCTGGCGCTGCCACTATTCGCCTTGTTTGTACTGCTGAGTGTGGCGGTTAATTTCGTTCCCACGCCGTGGTGGGGAATGAACAGTGTGATCCGCAATTTGCCTTATTACAGCCTTGGCGCATGGTTTGGCGCAACAATAATGACCTGTGTTAAAGAGGTGCCGTTGCGCCGCCATCTGCTGATGGCTTCTTTGCTTACCGTTCTGGCGGTCGGTGCCTGGTTGTTTACTATCTCGCTGCTGTTGTCGCTGGTATCGATTGTGGTGATCATGAAGCTGTTTTATCAATACGAGCAACGATTCGGTATGCGCTCCACCAGCCTGCTGAATGTGATTGGCTCCAACACCATTGCTATCTACACCACCCATCGCATTCTGGTTGAAATATTCAGCTTAACTCTGCTTGCGCAAATGAACGCAGCACGCTGGTCGCCGCAAGTCGAACTGACACTCCTGCTGGTTTATCCCTTTGTCAGTTTGTTCATCTGTACTGTTGCGGGCTTGCTGGTAAGAAAACTTTCACAGCGTGCATTCAGCGATCTGTTGTTCTCCCCGCCTTCACTGCCCGCTGCCGTCAGTTACTCCCGCTAA", 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"ECK1102" - ], - [ - "gene_synonym", - "ycfU" - ], - [ - "gene_synonym", - "NP_415634.1" - ], - [ - "gene_synonym", - "b1116" - ], - [ - "gene_synonym", - "EcoGene:EG13439" - ], - [ - "gene_synonym", - "ASAP:ABE-0003772" - ] - ], - "dna_sequence": "ATGTACCAACCTGTCGCTCTATTTATTGGCCTGCGTTACATGCGTGGGCGTGCAGCGGATCGCTTCGGTCGTTTCGTCTCCTGGCTTTCTACCATCGGCATTACCCTCGGGGTGATGGCGCTGGTCACAGTATTGTCAGTGATGAACGGCTTTGAGCGCGAGCTGCAAAACAACATCCTTGGCCTGATGCCACAGGCAATTCTCTCTTCTGAGCATGGCTCTCTTAACCCGCAGCAACTCCCAGAAACGGCAGTCAAACTGGACGGCGTTAATCGCGTCGCACCTATTACTACCGGTGATGTGGTACTGCAAAGCGCGCGCAGCGTGGCGGTCGGGGTGATGCTCGGTATCGACCCGGCGCAAAAAGATCCACTTACACCGTATCTGGTCAATGTGAAACAAACTGACCTCGAGCCGGGGAAATATAATGTCATCCTCGGCGAACAACTTGCCTCACAGCTAGGCGTTAATCGCGGTGATCAAATCCGCGTGATGGTACCATCTGCCAGCCAGTTCACGCCGATGGGGCGTATTCCAAGCCAGCGCCTGTTCAATGTGATTGGCACTTTCGCCGCCAACAGTGAAGTCGATGGCTATGAAATGCTGGTGAATATTGAGGATGCCTCGCGTCTGATGCGTTATCCGGCAGGCAATATTACCGGCTGGCGTTTGTGGCTGGATGAGCCGCTGAAAGTCGACTCATTAAGTCAGCAAAAACTGCCTGAAGGCAGCAAATGGCAGGACTGGCGTGATCGTAAAGGCGAGTTGTTCCAGGCCGTACGCATGGAAAAAAATATGATGGGTTTACTGCTGAGCCTGATTGTCGCCGTTGCGGCGTTTAACATTATTACCTCACTAGGGCTGATGGTAATGGAGAAGCAGGGCGAAGTAGCGATCCTGCAAACGCAAGGCTTAACTCCGCGACAAATCATGATGGTCTTTATGGTGCAAGGGGCCAGCGCCGGGATTATCGGTGCGATCCTCGGAGCGGCGCTTGGCGCCCTGCTTGCCAGCCAGTTAAATAATCTGATGCCGATAATCGGCGTCCTGCTTGATGGCGCGGCGCTGCCGGTGGCTATCGAACCTTTACAGGTCATTGTTATTGCGCTGGTGGCGATGGCTATCGCGCTGCTGTCTACGCTTTACCCTTCATGGCGCGCTGCCGCCACTCAACCCGCTGAGGCTTTACGTTATGAATAA", - "dna_sequence_length": 1200, - "functions": [ - "lipoprotein-releasing system transmembrane protein" - ], - "id": "CDS_1094", - "location": [ - [ - "NC_000913", - 1175427, - "+", - 1200 - ] - ], - "md5": "1cbdd3d9e2874823c058d9197d55411b", - "parent_gene": "", - "protein_md5": "244f900a709d08330dbbbe6a157ce87b", - "protein_translation": "MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKLPEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGASAGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE", - "protein_translation_length": 399, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5162" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75957" - ], - [ - "gene_synonym", - "lolD" - ], - [ - "gene_synonym", - "ycfV" - ], - [ - "gene_synonym", - "ECK1103" - ], - [ - "gene_synonym", - "EcoGene:EG13440" - ], - [ - "gene_synonym", - "NP_415635.4" - ], - [ - "gene_synonym", - "b1117" - ], - [ - "gene_synonym", - "GI:90111215" - ], - [ - "gene_synonym", - "GeneID:945670" - ], - [ - "gene_synonym", - "ASAP:ABE-0003774" - ] - ], - "dna_sequence": "ATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTGCTGCACAATGTCAGTTTCAGCGTCGGCGAAGGTGAAATGATGGCGATCGTCGGTAGCTCTGGTTCCGGTAAAAGTACCTTGCTGCACCTGCTGGGCGGGCTGGATACGCCAACCTCCGGCGATGTGATTTTTAATGGTCAGCCAATGAGCAAACTGTCGTCGGCAGCGAAAGCTGAACTGCGCAACCAGAAGCTGGGCTTTATTTATCAGTTTCACCACCTGCTGCCGGATTTTACCGCCCTGGAAAACGTGGCTATGCCGCTGCTGATTGGCAAGAAAAAGCCCGCTGAAATCAACAGCCGTGCACTTGAGATGTTAAAAGCGGTGGGGCTGGATCATCGTGCGAATCACCGCCCATCTGAACTTTCTGGCGGCGAACGCCAGCGTGTGGCGATTGCCCGTGCGCTGGTGAATAACCCGCGCCTGGTACTGGCGGATGAACCTACCGGTAACCTCGATGCGCGTAACGCCGACAGCATCTTCCAGTTGCTTGGGGAATTGAATCGCTTGCAGGGCACCGCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCCGCCAGTTAGAAATGCGTGATGGTCGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAA", - "dna_sequence_length": 702, - "functions": [ - "outer membrane-specific lipoprotein transporter subunit" - ], - "id": "CDS_1095", - "location": [ - [ - "NC_000913", - 1176619, - "+", - 702 - ] - ], - "md5": "934e893ec5bd7664264adb6dcecd042d", - "parent_gene": "", - "protein_md5": "a0bb6da05e76073d54f884b632b12e60", - "protein_translation": "MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE", - "protein_translation_length": 233, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129081" - ], - [ - "gene_synonym", - "JW1104" - ], - [ - "gene_synonym", - "lolE" - ], - [ - "gene_synonym", - "ycfW" - ], - [ - "gene_synonym", - "EcoGene:EG13441" - ], - [ - "gene_synonym", - "ECK1104" - ], - [ - "gene_synonym", - "ASAP:ABE-0003776" - ], - [ - "gene_synonym", - "GeneID:945665" - ], - [ - "gene_synonym", - "b1118" - ], - [ - "gene_synonym", - "NP_415636.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75958" - ] - ], - "dna_sequence": "ATGGCGATGCCTTTATCGTTATTAATTGGCCTGCGTTTTAGTCGCGGACGGCGGCGCGGCGGCATGGTGTCGCTGATCTCCGTTATTTCTACCATTGGCATTGCCCTCGGCGTGGCGGTATTGATCGTCGGCTTAAGCGCGATGAACGGCTTTGAACGCGAACTGAACAACCGTATTCTGGCGGTGGTGCCGCATGGTGAAATCGAGGCGGTGGATCAGCCGTGGACTAACTGGCAGGAAGCACTGGATCACGTGCAAAAAGTGCCGGGTATTGCCGCTGCCGCGCCGTATATCAATTTCACCGGGCTGGTGGAAAGTGGCGCGAATCTTCGCGCAATCCAGGTGAAGGGCGTTAACCCGCAACAGGAACAGCGTCTGAGCGCATTACCCTCGTTTGTCCAGGGCGATGCGTGGCGCAATTTTAAAGCGGGCGAACAGCAAATTATCATCGGCAAAGGCGTGGCGGATGCGCTGAAAGTGAAGCAGGGGGATTGGGTGTCGATTATGATCCCCAACTCGAATCCCGAGCATAAACTGATGCAGCCAAAACGTGTGCGTTTGCACGTTGCCGGTATTTTGCAGTTGAGTGGTCAACTCGATCACAGTTTTGCCATGATCCCGCTGGCGGATGCCCAACAATATCTTGATATGGGTTCCAGCGTGTCAGGTATTGCCCTTAAAATGACGGATGTTTTCAACGCCAATAAGCTGGTACGCGATGCGGGTGAAGTGACCAACAGCTATGTTTATATTAAAAGCTGGATTGGTACTTACGGCTATATGTATCGCGATATCCAAATGATCCGCGCCATTATGTATCTGGCGATGGTACTGGTGATTGGCGTGGCCTGTTTCAACATCGTCTCCACCTTAGTGATGGCGGTGAAAGACAAGAGTGGCGATATCGCAGTATTAAGAACGCTGGGGGCGAAAGATGGTTTAATTCGCGCCATCTTTGTCTGGTATGGATTGCTGGCAGGGCTGTTCGGCAGCCTGTGTGGTGTGATTATCGGCGTAGTGGTTTCACTGCAACTTACCCCGATTATTGAGTGGATTGAAAAGTTGATCGGTCATCAGTTCCTCTCCAGCGATATCTATTTTATTGATTTCCTGCCATCGGAATTGCACTGGCTGGACGTCTTCTACGTACTGGTCACAGCATTGTTGCTGAGTCTTTTGGCAAGTTGGTATCCGGCGCGGCGCGCCAGTAATATTGACCCTGCGCGAGTCCTTAGCGGCCAGTAA", - "dna_sequence_length": 1245, - "functions": [ - "lipoprotein-releasing system transmembrane protein" - ], - "id": "CDS_1096", - "location": [ - [ - "NC_000913", - 1177320, - "+", - 1245 - ] - ], - "md5": "4d31c807c34ce65120163bf2141f1843", - "parent_gene": "", - "protein_md5": "eb86abe3a553dee6e1d891af3baf67a5", - "protein_translation": "MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ", - "protein_translation_length": 414, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129082" - ], - [ - "gene_synonym", - "JW1105" - ], - [ - "gene_synonym", - "ycfX" - ], - [ - "gene_synonym", - "NP_415637.1" - ], - [ - "gene_synonym", - "ECK1105" - ], - [ - "gene_synonym", - "ASAP:ABE-0003778" - ], - [ - "gene_synonym", - "EcoGene:EG13442" - ], - [ - "gene_synonym", - "GeneID:945664" - ], - [ - "gene_synonym", - "b1119" - ], - [ - "gene_synonym", - "nagK" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75959" - ] - ], - "dna_sequence": "ATGTATTACGGGTTTGATATTGGTGGAACAAAAATTGCGCTTGGCGTGTTTGATAGCGGTCGGCAGTTGCAGTGGGAAAAGCGGGTGCCGACACCGCGTGACAGCTATGACGCATTTTTAGATGCAGTGTGTGAGCTGGTAGCTGAAGCTGACCAACGTTTTGGCTGTAAAGGTTCTGTCGGCATCGGTATTCCGGGAATGCCGGAAACAGAAGATGGTACGCTGTATGCCGCCAATGTCCCCGCTGCCAGCGGTAAACCGCTGCGTGCCGACCTGAGCGCACGTCTTGATCGCGATGTACGCCTTGATAACGATGCCAACTGTTTTGCCCTTTCAGAAGCCTGGGATGATGAATTTACTCAATATCCACTGGTGATGGGGTTGATTCTCGGCACCGGTGTTGGCGGCGGGCTGATTTTCAACGGCAAACCGATTACCGGTAAAAGCTACATTACCGGCGAGTTTGGCCATATGCGTCTGCCGGTTGATGCGTTAACCATGATGGGGTTGGATTTCCCGTTACGCCGCTGCGGCTGTGGTCAGCATGGCTGCATTGAAAATTATCTGTCTGGTCGCGGTTTTGCGTGGCTGTATCAACACTATTATCATCAACCGTTGCAGGCTCCCGAAATTATTGCGCTTTATGATCAAGGCGATGAGCAGGCAAGGGCGCACGTTGAGCGTTATCTGGATTTATTAGCGGTTTGTCTGGGAAATATCCTGACCATCGTTGACCCTGACCTGGTCGTCATTGGTGGTGGCTTATCGAATTTCCCGGCAATCACAACGCAACTGGCGGACAGGCTGCCTCGTCATCTCTTACCTGTAGCTCGTGTTCCGCGCATTGAACGCGCGCGCCACGGTGATGCGGGAGGAATGCGTGGTGCGGCCTTCCTACATCTAACCGATTAA", - "dna_sequence_length": 912, - "functions": [ - "N-acetyl-D-glucosamine kinase" - ], - "id": "CDS_1097", - "location": [ - [ - "NC_000913", - 1178593, - "+", - 912 - ] - ], - "md5": "19ca26bfa0264e072dd2c14f4352b6f1", - "parent_gene": "", - "protein_md5": "991cf2dec74cee8f23fdedc941c4dbb2", - "protein_translation": "MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVCELVAEADQRFGCKGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLIFNGKPITGKSYITGEFGHMRLPVDALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQHYYHQPLQAPEIIALYDQGDEQARAHVERYLDLLAVCLGNILTIVDPDLVVIGGGLSNFPAITTQLADRLPRHLLPVARVPRIERARHGDAGGMRGAAFLHLTD", - "protein_translation_length": 303, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ycfY" - ], - [ - "gene_synonym", - "JW1106" - ], - [ - "gene_synonym", - "ECK1106" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75960" - ], - [ - "gene_synonym", - "NP_415638.2" - ], - [ - "gene_synonym", - "GeneID:945687" - ], - [ - "gene_synonym", - "ASAP:ABE-0003781" - ], - [ - "gene_synonym", - "GI:308209619" - ], - [ - "gene_synonym", - "EcoGene:EG13443" - ], - [ - "gene_synonym", - "cobB" - ], - [ - "gene_synonym", - "npdA" - ], - [ - "gene_synonym", - "b1120" - ] - ], - "dna_sequence": "ATGGAAAAACCAAGAGTACTCGTACTGACAGGGGCAGGAATTTCTGCGGAATCAGGTATTCGTACCTTTCGCGCCGCAGATGGCCTGTGGGAAGAACATCGGGTTGAAGATGTGGCAACGCCGGAAGGTTTCGATCGCGATCCTGAACTGGTGCAAGCGTTTTATAACGCCCGTCGTCGACAGCTGCAGCAGCCAGAAATTCAGCCTAACGCCGCGCATCTTGCGCTGGCTAAACTGCAAGACGCCCTCGGCGATCGCTTTTTGCTGGTGACGCAGAATATCGACAACCTGCATGAACGCGCAGGTAATACCAATGTGATTCATATGCATGGGGAACTGCTGAAAGTGCGTTGTTCACAAAGTGGTCAGGTTCTCGACTGGACAGGAGACGTTACCCCAGAAGATAAATGCCATTGTTGCCAGTTTCCGGCACCCTTGCGCCCGCACGTAGTGTGGTTTGGCGAAATGCCACTCGGCATGGATGAAATTTATATGGCGTTGTCGATGGCCGATATTTTCATTGCCATTGGCACATCCGGGCATGTTTATCCGGCGGCTGGGTTTGTTCACGAAGCGAAACTGCATGGCGCGCACACCGTGGAACTGAATCTTGAACCGAGTCAGGTTGGTAATGAATTTGCCGAGAAATATTACGGCCCGGCAAGCCAGGTGGTGCCTGAGTTTGTTGAAAAGTTGCTGAAGGGATTAAAAGCGGGAAGCATTGCCTGA", - "dna_sequence_length": 729, - "functions": [ - "deacetylase of acs and cheY, chemotaxis regulator" - ], - "id": "CDS_1098", - "location": [ - [ - "NC_000913", - 1179631, - "+", - 729 - ] - ], - "md5": "bf7f108bbc76782f11a67593559cbc2d", - "parent_gene": "", - "protein_md5": "5272721a7539cf8d270315cd97af2def", - "protein_translation": "MEKPRVLVLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQQPEIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQVLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEPSQVGNEFAEKYYGPASQVVPEFVEKLLKGLKAGSIA", - "protein_translation_length": 242, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ycfZ" - ], - [ - "gene_synonym", - "JW1107" - ], - [ - "gene_synonym", - "GI:16129084" - ], - [ - "gene_synonym", - "NP_415639.1" - ], - [ - "gene_synonym", - "GeneID:945685" - ], - [ - "gene_synonym", - "ECK1107" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75961" - ], - [ - "gene_synonym", - "ASAP:ABE-0003784" - ], - [ - "gene_synonym", - "EcoGene:EG13444" - ], - [ - "gene_synonym", - "b1121" - ] - ], - "dna_sequence": "ATGAAAAAATTCATTATACTGCTCAGTTTACTGATACTCCTGCCTCTGACAGCAGCCAGCAAGCCATTAATTCCAATAATGAAGACACTTTTTACGGACGTTACCGGTACTGTACCAGATGCTGAAGAGATCGCGCATAAAGCCGAGCTTTTTCGCCAACAAACGGGAATTGCACCGTTTATTGTGGTTTTACCCGACATTAATAATGAAGCCAGTCTCAGACAAAATGGTAAAGCGATGCTGGCGCATGCGTCATCTTCATTGAGTGATGTAAAAGGAAGTGTTCTGTTACTATTTACTACCCGCGAACCACGGTTAATTATGATCACCAACGGCCAGGTTGAAAGTGGTCTGGACGATAAACATCTCGGCCTTCTGATAGAAAATCACACGCTGGCTTATTTAAATGCAGATCTCTGGTATCAGGGAATCAATAATGCATTGGCTGTTCTACAAGCACAGATATTAAAACAATCGACGCCGCCACTAACGTATTATCCGCATCCAGGACAACAGCATGAAAATGCTCCCCCCGGCAGCACCAACACATTAGGTTTTATCGCCTGGGCTGCGACGTTTATCTTATTTTCCAGGATCTTTTACTACACGACTCGTTTTATTTATGCGTTAAAATTTGCAGTGGCGATGACTATTGCCAATATGGGTTATCAGGCTTTATGTTTGTATATCGATAATAGCTTTGCGATTACCAGAATATCGCCACTCTGGGCAGGGCTAATTGGTGTCTGTACGTTTATTGCCGCATTGTTATTGACGAGTAAACGATAA", - "dna_sequence_length": 789, - "functions": [ - "inner membrane protein" - ], - "id": "CDS_1099", - "location": [ - [ - "NC_000913", - 1181267, - "-", - 789 - ] - ], - "md5": "8ada274f53d4f16c05fd5e584f7c292e", - "parent_gene": "", - "protein_md5": "289bf174466dfcd07a683dc3a02d83ab", - "protein_translation": "MKKFIILLSLLILLPLTAASKPLIPIMKTLFTDVTGTVPDAEEIAHKAELFRQQTGIAPFIVVLPDINNEASLRQNGKAMLAHASSSLSDVKGSVLLLFTTREPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQSTPPLTYYPHPGQQHENAPPGSTNTLGFIAWAATFILFSRIFYYTTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRISPLWAGLIGVCTFIAALLLTSKR", - "protein_translation_length": 262, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1108" - ], - [ - "gene_synonym", - "JW5164" - ], - [ - "gene_synonym", - "EcoGene:EG13445" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75962" - ], - [ - "gene_synonym", - "GeneID:945684" - ], - [ - "gene_synonym", - "GI:90111216" - ], - [ - "gene_synonym", - "NP_415640.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0003786" - ], - [ - "gene_synonym", - "ymfA" - ], - [ - "gene_synonym", - "b1122" - ] - ], - "dna_sequence": "ATGAGTCAGGACAGTAAAGTTTTCTTTCGTATATTCCTCGGTATCGGTCTGGTACTGATCCTCATTTCTGTTGTTGTCTTTTATAACCAGTTCACCTATAGCAAAGACGCGATTCATACCGAAGGCGTCATTGTTGATACCGTCTGGCACTCCAGTCATTCTCATCGCACGGGTAAAGATGGTTCGTGGTATCCCGTCGTTGCCTTTCGACCGACGCCAGATTACACGCTAATTTTCAATTCGAGTATCGGCAGCGATTTTTATGAAGACAGCGAAGGCGATAAAGTTAATGTTTATTATTCTCCCGGGCATCCTGAAAAGGCTGAGATAAATAACCCGTGGGTTAATTTTTTTAAATGGGGGTTTATCGGCATTATGGGCGTTATTTTTATCGCCGTCGGTTTATTAATAAGTATGCCCTCCTCTAAAAAATCACGCAGGAAACGGAAGTCCCGCCCATGA", - "dna_sequence_length": 462, - "functions": [ - "DUF3592 family inner membrane protein" - ], - "id": "CDS_1100", - "location": [ - [ - "NC_000913", - 1181725, - "-", - 462 - ] - ], - "md5": "581fde58abca52f43ac50ec4b9be1a51", - "parent_gene": "", - "protein_md5": "d85b3bfd79fc3d04d5b29c206f3b0408", - "protein_translation": "MSQDSKVFFRIFLGIGLVLILISVVVFYNQFTYSKDAIHTEGVIVDTVWHSSHSHRTGKDGSWYPVVAFRPTPDYTLIFNSSIGSDFYEDSEGDKVNVYYSPGHPEKAEINNPWVNFFKWGFIGIMGVIFIAVGLLISMPSSKKSRRKRKSRP", - "protein_translation_length": 153, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1109" - ], - [ - "gene_synonym", - "GI:16129086" - ], - [ - "gene_synonym", - "JW1109" - ], - [ - "gene_synonym", - "EcoGene:EG10752" - ], - [ - "gene_synonym", - "GeneID:945682" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFK9" - ], - [ - "gene_synonym", - "NP_415641.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003789" - ], - [ - "gene_synonym", - "potD" - ], - [ - "gene_synonym", - "b1123" - ] - ], - "dna_sequence": "ATGAAAAAATGGTCACGCCACCTGCTCGCGGCGGGTGCTCTGGCACTGGGCATGAGCGCCGCTCACGCCGATGACAACAACACGCTGTATTTCTACAACTGGACCGAGTACGTGCCGCCAGGACTGCTTGAACAGTTCACCAAAGAAACCGGTATTAAGGTTATCTATTCGACTTACGAGTCGAACGAAACCATGTACGCCAAGCTGAAAACATACAAAGACGGTGCCTATGATCTGGTGGTTCCTTCAACCTATTACGTTGATAAAATGCGTAAAGAAGGGATGATCCAGAAGATCGACAAGTCGAAGTTAACAAACTTCAGCAATCTCGATCCAGACATGCTCAACAAGCCTTTTGACCCGAATAACGACTACTCCATTCCGTATATCTGGGGTGCGACGGCGATTGGTGTTAACGGTGATGCGGTGGATCCGAAATCTGTCACCAGCTGGGCCGATCTGTGGAAGCCAGAGTACAAAGGCAGCCTGCTGTTGACCGACGATGCCCGTGAAGTGTTCCAGATGGCGCTGCGTAAGCTGGGCTACTCCGGTAACACCACCGATCCGAAAGAGATTGAAGCTGCATATAACGAGCTGAAAAAACTGATGCCAAACGTGGCAGCCTTTAACTCCGATAACCCGGCGAACCCGTACATGGAAGGCGAAGTTAACCTCGGCATGATCTGGAACGGTTCTGCTTTCGTTGCACGCCAGGCGGGTACGCCAATTGACGTGGTGTGGCCGAAAGAAGGCGGCATTTTCTGGATGGACAGCCTGGCGATCCCGGCAAATGCCAAAAACAAAGAAGGCGCGCTGAAATTGATCAACTTCCTGCTGCGCCCGGATGTGGCAAAACAGGTTGCTGAAACTATCGGTTATCCAACGCCAAACCTTGCGGCGCGTAAGCTGTTAAGTCCAGAAGTGGCGAACGATAAAACACTCTACCCGGATGCTGAAACCATTAAAAATGGCGAATGGCAGAATGACGTTGGCGCAGCCAGCAGCATTTATGAAGAGTATTATCAGAAGCTGAAAGCAGGACGTTAA", - "dna_sequence_length": 1047, - "functions": [ - "spermidine/putrescine ABC transporter periplasmic binding protein" - ], - "id": "CDS_1101", - "location": [ - [ - "NC_000913", - 1182829, - "-", - 1047 - ] - ], - "md5": "c76a85351c639f1beeca3a0f169fb875", - "parent_gene": "", - "protein_md5": "c3f307642155ebe32b4c91383e8cadac", - "protein_translation": "MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGSAFVARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIGYPTPNLAARKLLSPEVANDKTLYPDAETIKNGEWQNDVGAASSIYEEYYQKLKAGR", - "protein_translation_length": 348, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1110" - ], - [ - "gene_synonym", - "GI:16129087" - ], - [ - "gene_synonym", - "NP_415642.1" - ], - [ - "gene_synonym", - "EcoGene:EG10751" - ], - [ - "gene_synonym", - "GeneID:945691" - ], - [ - "gene_synonym", - "ECK1110" - ], - [ - "gene_synonym", - "ASAP:ABE-0003791" - ], - [ - "gene_synonym", - "b1124" - ], - [ - "gene_synonym", - "potC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFK6" - ] - ], - "dna_sequence": "ATGATCGGTCGACTGCTTCGCGGCGGTTTTATGACCGCTATCTACGCGTACCTGTATATCCCAATCATTATTTTGATTGTGAACTCCTTTAACAGCTCGCGCTTTGGCATCAACTGGCAGGGCTTTACCACCAAATGGTATAGCCTGCTGATGAACAACGACAGCCTGTTACAGGCAGCGCAGCATTCACTAACAATGGCGGTGTTTTCGGCGACGTTTGCTACGCTTATCGGTTCACTGACGGCAGTTGCGCTGTACCGTTATCGCTTTCGTGGTAAGCCGTTCGTTAGCGGAATGCTGTTTGTGGTGATGATGTCACCAGATATCGTGATGGCGATTTCGCTGCTGGTGCTGTTTATGCTGCTGGGTATTCAGCTTGGCTTCTGGTCGCTGCTGTTCTCGCATATCACCTTCTGCCTGCCATTTGTGGTGGTGACGGTGTATTCGCGCCTGAAAGGTTTTGACGTGCGAATGCTGGAAGCGGCGAAAGATCTCGGTGCCAGCGAATTTACCATTCTGCGAAAAATCATTCTGCCACTGGCAATGCCAGCGGTGGCGGCGGGCTGGGTGTTAAGCTTTACCCTGTCGATGGACGATGTGGTAGTTTCTTCGTTCGTCACCGGACCAAGTTATGAAATTCTGCCGTTAAAAATTTATTCGATGGTCAAAGTCGGCGTATCGCCGGAAGTTAACGCGCTGGCAACCATATTACTGGTGCTGTCGCTGGTGATGGTTATTGCCAGCCAGCTTATTGCTCGTGATAAAACGAAAGGTAACACAGGGGACGTTAAATGA", - "dna_sequence_length": 795, - "functions": [ - "spermidine/putrescine ABC transporter permease" - ], - "id": "CDS_1102", - "location": [ - [ - "NC_000913", - 1183620, - "-", - 795 - ] - ], - "md5": "4162c5d61d73d8ce49aed5474bbbf22a", - "parent_gene": "", - "protein_md5": "2da4f50be2cee1134a6ff6ffaa0c724f", - "protein_translation": "MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTTKWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGNTGDVK", - "protein_translation_length": 264, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1111" - ], - [ - "gene_synonym", - "EcoGene:EG10750" - ], - [ - "gene_synonym", - "GeneID:945692" - ], - [ - "gene_synonym", - "ECK1111" - ], - [ - "gene_synonym", - "GI:162135921" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFK4" - ], - [ - "gene_synonym", - "ASAP:ABE-0003794" - ], - [ - "gene_synonym", - "NP_415643.3" - ], - [ - "gene_synonym", - "b1125" - ], - [ - "gene_synonym", - "potB" - ] - ], - "dna_sequence": "GTGATTGTCACTATTGTCGGTTGGCTTGTGTTGTTTGTCTTTCTGCCCAACCTGATGATCATTGGCACCAGCTTTTTGACCCGCGACGACGCCAGTTTTGTCAAAATGGTCTTTACGCTGGATAACTACACGCGTCTGCTCGATCCGCTCTATTTTGAAGTGCTATTGCACTCGCTGAATATGGCGCTGATCGCCACCCTCGCCTGCCTGGTGCTGGGCTACCCGTTTGCCTGGTTTCTGGCGAAGTTGCCACACAAGGTGCGTCCGCTGCTGCTGTTTCTGCTGATTGTTCCGTTCTGGACCAACTCATTAATTCGTATCTACGGGCTGAAAATTTTCCTCAGCACCAAAGGCTATCTCAACGAGTTTTTGCTCTGGCTGGGCGTTATCGACACACCAATCCGTATCATGTTCACGCCCAGTGCGGTGATTATCGGTCTGGTTTACATTCTGCTGCCGTTTATGGTGATGCCGCTGTACTCCAGTATCGAAAAACTGGATAAGCCGTTGCTTGAGGCGGCGCGCGATCTCGGTGCCAGCAAGTTACAGACTTTTATCCGTATCATTATTCCACTGACGATGCCGGGAATTATTGCCGGATGTCTGCTGGTGATGCTGCCAGCGATGGGCCTGTTCTATGTATCCGACCTGATGGGCGGTGCGAAAAACCTGCTGATCGGTAACGTCATCAAGGTCCAGTTCCTTAATATTCGTGACTGGCCGTTTGGTGCAGCTACCAGCATTACGCTGACTATCGTAATGGGCCTGATGTTGCTGGTTTACTGGCGCGCTTCTCGTTTGCTGAATAAGAAGGTGGAACTCGAATGA", - "dna_sequence_length": 828, - "functions": [ - "spermidine/putrescine ABC transporter permease" - ], - "id": "CDS_1103", - "location": [ - [ - "NC_000913", - 1184444, - "-", - 828 - ] - ], - "md5": "9b613b63f31c6f5922116f5ae060356a", - "parent_gene": "", - "protein_md5": "7aefa8b335a998c5135c5aad7cc9855d", - "protein_translation": "MIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYTRLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYILLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASRLLNKKVELE", - "protein_translation_length": 275, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1112" - ], - [ - "gene_synonym", - "EcoGene:EG10749" - ], - [ - "gene_synonym", - "GeneID:946323" - ], - [ - "gene_synonym", - "GI:16129089" - ], - [ - "gene_synonym", - "ECK1112" - ], - [ - "gene_synonym", - "NP_415644.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003796" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69874" - ], - [ - "gene_synonym", - "b1126" - ], - [ - "gene_synonym", - "potA" - ] - ], - "dna_sequence": "ATGGGACAGAGTAAAAAATTGAATAAACAACCGAGTTCGCTTTCACCGCTGGTGCAATTGGCGGGAATTCGCAAATGCTTTGATGGTAAAGAGGTCATTCCCCAGCTGGATCTGACTATCAACAATGGCGAGTTCCTCACGCTGCTTGGCCCTTCTGGCTGCGGTAAAACAACCGTTCTTCGCCTGATTGCAGGTCTGGAAACTGTTGATTCCGGACGCATCATGCTGGATAACGAGGACATCACCCACGTTCCGGCGGAAAACCGCTATGTGAACACTGTTTTCCAAAGCTACGCACTTTTCCCCCACATGACCGTGTTCGAAAATGTGGCCTTTGGGTTGCGCATGCAAAAAACCCCCGCTGCTGAAATTACGCCCCGCGTGATGGAAGCCCTGCGGATGGTGCAGTTGGAAACCTTCGCTCAACGCAAACCGCATCAGCTCTCTGGTGGTCAACAGCAACGCGTCGCCATTGCTCGCGCGGTGGTTAACAAGCCTCGTCTGTTGTTGCTGGATGAGTCGCTCTCAGCGCTGGATTACAAACTGCGTAAGCAAATGCAGAACGAGCTGAAAGCGTTACAGCGTAAGCTTGGCATTACATTCGTCTTTGTGACTCACGACCAGGAAGAAGCACTCACCATGTCAGACAGGATTGTGGTGATGCGCGATGGTCGCATTGAGCAAGACGGCACGCCGCGTGAAATCTACGAAGAGCCGAAAAACCTGTTTGTTGCCGGCTTCATTGGCGAAATCAATATGTTTAACGCCACTGTCATCGAACGTCTAGACGAGCAGCGCGTACGCGCCAACGTTGAAGGCCGCGAATGTAATATCTACGTTAACTTCGCCGTTGAACCGGGGCAAAAACTGCATGTTCTGCTGCGCCCGGAAGACTTACGTGTTGAAGAGATTAACGACGACAACCACGCTGAAGGGCTGATTGGTTACGTTCGCGAGCGTAACTACAAAGGCATGACGCTGGAGTCGGTTGTTGAACTGGAAAATGGCAAGATGGTGATGGTCAGCGAATTCTTCAATGAAGACGATCCTGACTTTGACCACTCTCTCGACCAAAAAATGGCCATTAATTGGGTAGAAAGCTGGGAGGTCGTACTGGCTGATGAAGAACACAAGTAA", - "dna_sequence_length": 1137, - "functions": [ - "spermidine/putrescine ABC transporter ATPase" - ], - "id": "CDS_1104", - "location": [ - [ - "NC_000913", - 1185594, - "-", - 1137 - ] - ], - "md5": "349ec8e621d483240048eb6f57f136c2", - "parent_gene": "", - "protein_md5": "8298de0c0cef9ebec11bfe5447380d15", - "protein_translation": "MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGRECNIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELENGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK", - "protein_translation_length": 378, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1113" - ], - [ - "gene_synonym", - "GeneID:946333" - ], - [ - "gene_synonym", - "EcoGene:EG11549" - ], - [ - "gene_synonym", - "GI:16129090" - ], - [ - "gene_synonym", - "ECK1113" - ], - [ - "gene_synonym", - "ASAP:ABE-0003800" - ], - [ - "gene_synonym", - "NP_415645.1" - ], - [ - "gene_synonym", - "b1127" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P29745" - ], - [ - "gene_synonym", - "pepT" - ] - ], - "dna_sequence": "ATGGATAAACTACTTGAGCGATTTTTGAACTACGTGTCTCTGGATACCCAATCAAAAGCAGGGGTGAGACAGGTTCCCAGCACGGAAGGCCAATGGAAGTTATTGCATCTGCTGAAAGAGCAGCTCGAAGAGATGGGGCTTATCAATGTGACCTTAAGTGAGAAGGGCACTTTGATGGCGACGTTACCGGCTAACGTCCCTGGCGATATCCCGGCGATTGGCTTTATTTCTCATGTGGATACCTCACCGGATTGCAGCGGCAAAAATGTGAATCCGCAAATTGTTGAAAACTATCGCGGTGGCGATATTGCGCTGGGTATCGGCGATGAAGTTTTATCACCGGTTATGTTCCCGGTGCTGCATCAGCTACTGGGTCAGACGCTGATTACCACCGATGGTAAAACCTTGTTAGGTGCCGATGACAAAGCAGGTATTGCAGAAATCATGACCGCGCTGGCGGTATTGCAACAGAAAAAAATTCCGCATGGTGATATTCGCGTCGCCTTTACCCCGGATGAAGAAGTGGGCAAAGGGGCGAAACATTTTGATGTTGACGCCTTCGATGCCCGCTGGGCTTACACTGTTGATGGTGGTGGCGTAGGCGAACTGGAGTTTGAAAACTTCAACGCCGCGTCGGTCAATATCAAAATTGTCGGTAACAATGTTCATCCGGGCACGGCGAAAGGAGTGATGGTAAATGCGCTGTCGCTGGCGGCACGTATTCATGCGGAAGTTCCGGCGGATGAAAGCCCGGAAATGACAGAAGGCTATGAAGGTTTCTATCATCTGGCGAGCATGAAAGGCACCGTTGAACGGGCCGATATGCACTACATCATCCGTGATTTCGACCGTAAACAGTTTGAAGCGCGTAAACGTAAAATGATGGAGATCGCCAAAAAAGTGGGCAAAGGGTTACATCCTGATTGCTACATTGAACTGGTGATTGAAGACAGTTACTACAATATGCGCGAGAAAGTGGTTGAGCATCCGCATATTCTCGATATCGCCCAGCAGGCGATGCGCGATTGCGATATTGAACCGGAACTGAAACCGATCCGCGGTGGTACCGACGGCGCGCAGTTGTCGTTTATGGGATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAA", - "dna_sequence_length": 1227, - "functions": [ - "peptidase T" - ], - "id": "CDS_1105", - "location": [ - [ - "NC_000913", - 1185844, - "+", - 1227 - ] - ], - "md5": "f2152143388dadaf295088edf4c41c94", - "parent_gene": "", - "protein_md5": "cc539b5eaec626aa7132f5766adb2d13", - "protein_translation": "MDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEEMGLINVTLSEKGTLMATLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKKIPHGDIRVAFTPDEEVGKGAKHFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIKIVGNNVHPGTAKGVMVNALSLAARIHAEVPADESPEMTEGYEGFYHLASMKGTVERADMHYIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILDIAQQAMRDCDIEPELKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEKAVQVIVRIAELTAQRK", - "protein_translation_length": 408, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11430" - ], - [ - "gene_synonym", - "JW1114" - ], - [ - "gene_synonym", - "NP_415646.4" - ], - [ - "gene_synonym", - "ECK1114" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27431" - ], - [ - "gene_synonym", - "GI:90111217" - ], - [ - "gene_synonym", - "b1128" - ], - [ - "gene_synonym", - "ycfD" - ], - [ - "gene_synonym", - "roxA" - ], - [ - "gene_synonym", - "GeneID:945391" - ], - [ - "gene_synonym", - "ASAP:ABE-0003802" - ] - ], - "dna_sequence": "ATGGAATACCAACTCACTCTTAACTGGCCCGATTTTCTTGAACGTCACTGGCAGAAACGCCCGGTGGTGTTAAAACGCGGCTTTAATAATTTTATTGACCCGATCTCTCCAGACGAGTTGGCGGGTCTGGCGATGGAAAGCGAAGTTGACAGTCGACTGGTCAGTCACCAGGATGGCAAATGGCAGGTCAGCCACGGCCCGTTCGAAAGCTACGATCATCTCGGTGAAACCAACTGGTCATTACTGGTACAGGCAGTGAACCACTGGCATGAGCCGACCGCCGCGCTGATGCGACCGTTCCGTGAACTACCGGACTGGCGTATTGATGATCTGATGATTTCTTTTTCTGTACCCGGCGGCGGCGTCGGCCCGCATCTCGATCAGTACGACGTGTTTATCATTCAGGGTACCGGACGTCGTCGCTGGCGAGTGGGCGAAAAGCTGCAAATGAAACAGCACTGCCCACATCCGGATCTGTTACAGGTCGATCCGTTCGAAGCCATCATCGATGAAGAGCTGGAGCCTGGTGATATTCTTTATATTCCGCCAGGATTCCCGCATGAAGGCTACGCGCTGGAAAATGCGATGAACTATTCCGTGGGCTTTCGCGCGCCAAATACGCGGGAACTGATTAGTGGATTTGCCGATTATGTGCTGCAACGTGAACTGGGCGGCAACTACTACAGCGATCCGGATGTTCCACCTCGCGCTCATCCTGCGGATGTTCTGCCGCAAGAGATGGATAAACTGCGTGAGATGATGCTCGAATTGATCAACCAGCCGGAACACTTTAAGCAATGGTTTGGCGAGTTTATATCCCAGTCACGTCATGAACTGGATATCGCGCCGCCAGAGCCGCCTTATCAGCCGGATGAAATCTACGATGCGCTGAAACAAGGTGAAGTGCTGGTGCGCCTGGGTGGTCTGCGCGTATTGCGCATTGGCGACGACGTGTATGCCAATGGTGAGAAGATCGATTCCCCGCACCGTCCGGCACTGGATGCACTCGCCAGCAACATTGCGCTGACTGCGGAGAATTTTGGCGATGCGCTGGAAGATCCGTCATTCCTCGCGATGCTCGCGGCGCTGGTCAATAGCGGGTATTGGTTCTTCGAAGGGTAA", - "dna_sequence_length": 1122, - "functions": [ - "50S ribosomal protein L16 arginine hydroxylase", - "2-oxoglutarate oxygenase" - ], - "id": "CDS_1106", - "location": [ - [ - "NC_000913", - 1188240, - "-", - 1122 - ] - ], - "md5": "a9172d3aa1c572272de845d23e76cde7", - "parent_gene": "", - "protein_md5": "0a0d0a63de134b3aebe1bc2f9c027855", - "protein_translation": "MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYVLQRELGGNYYSDPDVPPRAHPADVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDALKQGEVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALDALASNIALTAENFGDALEDPSFLAMLAALVNSGYWFFEG", - "protein_translation_length": 373, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "phoQ" - ], - [ - "gene_synonym", - "GeneID:946326" - ], - [ - "gene_synonym", - "NP_415647.1" - ], - [ - "gene_synonym", - "JW1115" - ], - [ - "gene_synonym", - "ECK1115" - ], - [ - "gene_synonym", - "EcoGene:EG10732" - ], - [ - "gene_synonym", - "GI:16129092" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23837" - ], - [ - "gene_synonym", - "b1129" - ], - [ - "gene_synonym", - "ASAP:ABE-0003805" - ] - ], - "dna_sequence": "ATGAAAAAATTACTGCGTCTTTTTTTCCCGCTCTCGCTGCGGGTACGTTTTCTGTTGGCAACGGCAGCGGTAGTACTGGTGCTTTCGCTTGCCTACGGAATGGTCGCGCTGATCGGTTATAGCGTCAGTTTCGATAAAACTACGTTTCGGCTGTTACGTGGCGAGAGCAATCTGTTCTATACCCTTGCGAAGTGGGAAAACAATAAGTTGCATGTCGAGTTACCCGAAAATATCGACAAGCAAAGCCCCACCATGACGCTAATTTATGATGAGAACGGGCAGCTTTTATGGGCGCAACGTGACGTGCCCTGGCTGATGAAGATGATCCAGCCTGACTGGCTGAAATCGAATGGTTTTCATGAAATTGAAGCGGATGTTAACGATACCAGCCTCTTGCTGAGTGGAGATCATTCGATACAGCAACAGTTGCAGGAAGTGCGGGAAGATGATGACGACGCGGAGATGACCCACTCGGTGGCAGTAAACGTCTACCCGGCAACATCGCGGATGCCAAAATTAACCATTGTGGTGGTGGATACCATTCCGGTGGAGCTAAAAAGTTCCTATATGGTCTGGAGCTGGTTTATCTATGTGCTCTCAGCCAATCTGCTGTTAGTGATCCCGCTGCTGTGGGTCGCCGCCTGGTGGAGTTTACGCCCCATCGAAGCCCTGGCAAAAGAAGTCCGCGAACTGGAAGAACATAACCGCGAATTGCTCAATCCAGCCACAACGCGAGAACTGACCAGTCTGGTACGAAACCTGAACCGATTGTTAAAAAGTGAACGCGAACGTTACGACAAATACCGTACGACGCTCACCGACCTGACCCATAGTCTGAAAACGCCACTGGCGGTGCTGCAAAGTACGCTGCGTTCTCTGCGTAGTGAAAAGATGAGCGTCAGTGATGCTGAGCCGGTAATGCTGGAGCAAATCAGCCGCATTTCACAGCAAATTGGCTACTACCTGCATCGTGCCAGTATGCGCGGCGGGACATTGCTCAGCCGCGAGCTGCATCCGGTCGCCCCACTGCTGGACAATCTCACCTCAGCGCTGAACAAAGTGTATCAACGCAAAGGGGTCAATATCTCTCTCGATATTTCGCCAGAGATCAGCTTTGTCGGTGAGCAGAACGATTTTGTCGAGGTGATGGGCAACGTGCTGGATAATGCCTGTAAATATTGCCTCGAGTTTGTCGAAATTTCTGCAAGGCAAACCGACGAGCATCTCTATATTGTGGTCGAGGATGATGGCCCCGGTATTCCATTAAGCAAGCGAGAGGTCATTTTCGACCGTGGTCAACGGGTTGATACTTTACGCCCTGGGCAAGGTGTAGGGCTGGCGGTAGCCCGCGAAATCACCGAGCAATATGAGGGTAAAATCGTCGCCGGAGAGAGCATGCTGGGCGGTGCGCGGATGGAGGTGATTTTTGGTCGCCAGCATTCTGCGCCGAAAGATGAATAA", - "dna_sequence_length": 1461, - "functions": [ - "sensory histidine kinase in two-component regulatory system with PhoP" - ], - "id": "CDS_1107", - "location": [ - [ - "NC_000913", - 1189776, - "-", - 1461 - ] - ], - "md5": "8d7fbe3ddf844303aa9fe43c7f2cc3e0", - "parent_gene": "", - "protein_md5": "22e04226a9dc62b86f8c48c9d68a8e9c", - "protein_translation": "MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSFDKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDVPWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVAVNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSLRPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLSRELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAREITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE", - "protein_translation_length": 486, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "phoP" - ], - [ - "gene_synonym", - "JW1116" - ], - [ - "gene_synonym", - "GeneID:945697" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23836" - ], - [ - "gene_synonym", - "ECK1116" - ], - [ - "gene_synonym", - "NP_415648.1" - ], - [ - "gene_synonym", - "GI:16129093" - ], - [ - "gene_synonym", - "EcoGene:EG10731" - ], - [ - "gene_synonym", - "b1130" - ], - [ - "gene_synonym", - "ASAP:ABE-0003807" - ] - ], - "dna_sequence": "ATGCGCGTACTGGTTGTTGAAGACAATGCGTTGTTACGTCACCACCTTAAAGTTCAGATTCAGGATGCTGGTCATCAGGTCGATGACGCAGAAGATGCCAAAGAAGCCGATTATTATCTCAATGAACATATACCGGATATTGCGATTGTCGATCTCGGATTGCCAGACGAGGACGGTCTGTCACTGATTCGCCGCTGGCGTAGCAACGATGTTTCACTGCCGATTCTGGTATTAACCGCCCGTGAAAGCTGGCAGGACAAAGTCGAAGTATTAAGTGCCGGTGCTGATGATTATGTGACTAAACCGTTTCATATTGAAGAGGTGATGGCGCGAATGCAGGCATTAATGCGGCGTAATAGCGGTCTGGCTTCACAGGTCATTTCGCTCCCCCCGTTTCAGGTTGATCTCTCTCGCCGTGAATTATCTATTAATGACGAAGTGATCAAACTGACCGCGTTCGAATACACTATTATGGAAACGTTGATACGCAATAATGGCAAAGTGGTCAGCAAAGATTCGTTAATGCTCCAACTCTATCCGGATGCGGAGCTGCGGGAAAGCCATACCATTGATGTACTGATGGGACGTCTGCGCAAAAAAATTCAGGCACAATATCCCCAAGAAGTGATTACCACCGTTCGCGGCCAGGGCTATCTGTTCGAATTGCGCTGA", - "dna_sequence_length": 672, - "functions": [ - "response regulator in two-component regulatory system with PhoQ" - ], - "id": "CDS_1108", - "location": [ - [ - "NC_000913", - 1190447, - "-", - 672 - ] - ], - "md5": "bd60f258d89d8b06ef13c0a4b5ade7e3", - "parent_gene": "", - "protein_md5": "df52ec73cacdfbba1e905ec5b1e1011e", - "protein_translation": "MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGYLFELR", - "protein_translation_length": 223, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415649.1" - ], - [ - "gene_synonym", - "JW1117" - ], - [ - "gene_synonym", - "GI:16129094" - ], - [ - "gene_synonym", - "ECK1117" - ], - [ - "gene_synonym", - "GeneID:945695" - ], - [ - "gene_synonym", - "purB" - ], - [ - "gene_synonym", - "ade" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB89" - ], - [ - "gene_synonym", - "b1131" - ], - [ - "gene_synonym", - "ASAP:ABE-0003810" - ], - [ - "gene_synonym", - "EcoGene:EG11314" - ] - ], - "dna_sequence": "ATGGAATTATCCTCACTGACCGCCGTTTCCCCTGTCGATGGACGCTACGGCGATAAAGTCAGCGCGCTGCGCGGGATTTTCAGCGAATATGGTTTGCTGAAATTCCGTGTACAAGTTGAAGTACGTTGGCTGCAAAAACTGGCCGCGCACGCAGCGATCAAGGAAGTTCCTGCTTTTGCTGCCGACGCAATCGGTTACCTTGATGCAATCGTCGCCAGTTTCAGCGAAGAAGATGCGGCGCGCATCAAAACTATCGAGCGTACCACTAACCACGACGTTAAAGCGGTTGAGTATTTCCTGAAAGAAAAAGTGGCGGAGATCCCGGAACTGCACGCGGTTTCTGAATTCATCCACTTTGCCTGTACTTCGGAAGATATCAATAACCTCTCCCACGCATTAATGCTGAAAACCGCGCGTGATGAAGTGATCCTGCCATACTGGCGTCAACTGATTGATGGCATTAAAGATCTCGCCGTTCAGTATCGCGATATCCCGCTGCTGTCTCGTACCCACGGTCAGCCAGCCACGCCGTCAACCATCGGTAAAGAGATGGCAAACGTCGCCTACCGTATGGAGCGCCAGTACCGCCAGCTTAACCAGGTGGAGATCCTCGGCAAAATCAACGGCGCGGTCGGTAACTATAACGCCCACATCGCCGCTTACCCGGAAGTTGACTGGCATCAGTTCAGCGAAGAGTTCGTCACCTCGCTGGGTATTCAGTGGAACCCGTACACCACCCAGATCGAACCGCACGACTACATTGCCGAACTGTTTGATTGCGTTGCGCGCTTCAACACTATTCTGATCGACTTTGACCGTGACGTCTGGGGTTATATCGCCCTTAACCACTTCAAACAGAAAACCATTGCTGGTGAGATTGGTTCTTCCACCATGCCGCATAAAGTTAACCCGATCGACTTCGAAAACTCCGAAGGGAATCTGGGCCTTTCCAACGCGGTATTGCAGCATCTGGCAAGCAAACTGCCGGTTTCCCGCTGGCAGCGTGACCTGACCGACTCTACCGTGCTGCGTAACCTCGGCGTGGGTATCGGTTATGCCTTGATTGCATATCAATCCACCCTGAAAGGCGTGAGCAAACTGGAAGTGAACCGTGACCATCTGCTGGATGAACTGGATCACAACTGGGAAGTGCTGGCTGAACCAATCCAGACAGTTATGCGTCGCTATGGCATCGAAAAACCGTACGAGAAGCTGAAAGAGCTGACTCGCGGTAAGCGCGTTGACGCCGAAGGCATGAAGCAGTTTATCGATGGTCTGGCGTTGCCAGAAGAAGAGAAAGCCCGCCTGAAAGCGATGACGCCGGCTAACTATATTGGTCGAGCTATCACGATGGTTGATGAGCTGAAATAA", - "dna_sequence_length": 1371, - "functions": [ - "adenylosuccinate lyase" - ], - "id": "CDS_1109", - "location": [ - [ - "NC_000913", - 1191986, - "-", - 1371 - ] - ], - "md5": "ce5f3b891fc6350860719dbd9a4203ea", - "parent_gene": "", - "protein_md5": "fb9a8b640c464a4aa7ca8951cb3a41f7", - "protein_translation": "MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFAADAIGYLDAIVASFSEEDAARIKTIERTTNHDVKAVEYFLKEKVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQYRDIPLLSRTHGQPATPSTIGKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHIAAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVWGYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTVMRRYGIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAITMVDELK", - "protein_translation_length": 456, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11345" - ], - [ - "gene_synonym", - "hflD" - ], - [ - "gene_synonym", - "ECK1118" - ], - [ - "gene_synonym", - "JW5165" - ], - [ - "gene_synonym", - "GI:16129095" - ], - [ - "gene_synonym", - "GeneID:945693" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25746" - ], - [ - "gene_synonym", - "ASAP:ABE-0003812" - ], - [ - "gene_synonym", - "hslZ" - ], - [ - "gene_synonym", - "b1132" - ], - [ - "gene_synonym", - "ycfC" - ], - [ - "gene_synonym", - "NP_415650.1" - ] - ], - "dna_sequence": "GTGGCAAAGAATTACTATGACATCACCCTCGCCCTGGCCGGTATTTGTCAGTCGGCACGCCTGGTGCAACAACTCGCTCACCAGGGGCATTGTGATGCCGATGCGCTACACGTCTCACTCAACAGTATTATTGATATGAACCCCAGCTCGACGCTGGCGGTTTTTGGCGGTAGCGAAGCCAACCTGCGCGTCGGGCTGGAAACCCTGCTCGGCGTGCTCAATGCCAGCAGTCGCCAGGGCTTAAACGCCGAATTAACCCGCTACACACTCAGCTTGATGGTGCTTGAGCGCAAACTCTCCTCAGCGAAAGGCGCGCTCGACACTCTGGGCAACCGGATCAACGGCCTGCAACGCCAGCTCGAACACTTCGATTTACAGTCCGAAACGCTGATGAGCGCGATGGCTGCTATCTATGTTGATGTGATTAGCCCGCTTGGCCCGCGCATTCAGGTCACCGGTTCCCCTGCTGTACTGCAAAGCCCACAAGTGCAGGCGAAAGTTCGCGCAACCCTGCTGGCAGGCATTCGCGCCGCCGTGCTCTGGCACCAGGTCGGCGGCGGACGTCTGCAACTGATGTTTTCTCGTAATCGCCTGACCACTCAGGCAAAACAAATTCTTGCTCATTTAACCCCGGAGTTGTGA", - "dna_sequence_length": 642, - "functions": [ - "putative lysogenization regulator" - ], - "id": "CDS_1110", - "location": [ - [ - "NC_000913", - 1192631, - "-", - 642 - ] - ], - "md5": "beb4937c24f33accc9aecbe8696f1c8d", - "parent_gene": "", - "protein_md5": "88da9e16b8cd01cb704a20bb0cdb300f", - "protein_translation": "MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSIIDMNPSSTLAVFGGSEANLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSAKGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQSPQVQAKVRATLLAGIRAAVLWHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL", - "protein_translation_length": 213, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11344" - ], - [ - "gene_synonym", - "trmU" - ], - [ - "gene_synonym", - "mnmA" - ], - [ - "gene_synonym", - "GeneID:945690" - ], - [ - "gene_synonym", - "JW1119" - ], - [ - "gene_synonym", - "asuE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25745" - ], - [ - "gene_synonym", - "ECK1119" - ], - [ - "gene_synonym", - "GI:90111218" - ], - [ - "gene_synonym", - "b1133" - ], - [ - "gene_synonym", - "ycfB" - ], - [ - "gene_synonym", - "NP_415651.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0003815" - ] - ], - "dna_sequence": "ATGTCTGAAACCGCAAAAAAAGTAATCGTCGGCATGTCCGGCGGTGTCGATTCCTCCGTTTCTGCCTGGCTGTTGCAACAACAGGGATATCAGGTCGAAGGCCTGTTTATGAAGAACTGGGAAGAAGACGACGGTGAGGAATATTGCACAGCGGCAGCGGATCTGGCTGATGCCCAGGCTGTCTGCGACAAGCTCGGCATTGAACTGCACACCGTTAACTTTGCTGCCGAGTACTGGGACAACGTCTTCGAACTGTTCCTTGCCGAATATAAAGCCGGTCGCACGCCGAATCCGGATATTCTGTGCAACAAAGAGATCAAATTTAAAGCCTTCCTCGAATTTGCCGCCGAAGATTTAGGTGCCGATTATATCGCTACCGGTCATTACGTACGTCGGGCCGATGTCGATGGCAAGAGCCGCCTGCTGCGTGGTCTGGACAGCAATAAAGACCAGAGCTACTTCCTTTATACGCTCAGCCATGAGCAGATTGCGCAAAGCCTGTTCCCGGTCGGCGAACTGGAAAAACCGCAGGTGCGTAAGATTGCTGAAGATCTTGGTCTGGTCACCGCGAAGAAAAAAGACTCTACCGGCATTTGCTTCATTGGCGAACGTAAATTCCGCGAGTTCCTGGGCCGTTATCTCCCGGCGCAACCGGGCAAAATCATTACCGTCGATGGCGATGAAATTGGTGAGCACCAGGGGCTGATGTATCACACTCTCGGTCAGCGTAAAGGTCTGGGTATCGGTGGCACCAAAGAAGGTACCGAAGAACCGTGGTATGTGGTGGACAAAGACGTCGAAAACAACATTCTGGTTGTCGCTCAGGGCCATGAACACCCGCGGCTGATGTCTGTCGGGTTGATTGCCCAGCAGTTGCACTGGGTCGATCGCGAACCATTCACCGGCACTATGCGTTGCACGGTAAAAACCCGCTATCGCCAGACCGATATCCCTTGCACCGTCAAGGCGCTGGACGATGATCGCATTGAAGTGATTTTCGATGAACCGGTTGCCGCCGTGACGCCGGGCCAGTCTGCCGTCTTCTATAACGGTGAAGTGTGCCTCGGTGGCGGTATTATTGAGCAGCGTCTGCCGCTGCCGGTCTGA", 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"gene_synonym", - "JW1120" - ], - [ - "gene_synonym", - "NP_415652.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003818" - ], - [ - "gene_synonym", - "ymfB" - ], - [ - "gene_synonym", - "b1134" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEI6" - ] - ], - "dna_sequence": "ATGTTTAAACCGCACGTTACCGTTGCTTGCGTGGTGCACGCAGAAGGCAAATTTTTAGTCGTTGAAGAGACGATTAATGGTAAAGCGTTATGGAACCAACCTGCCGGGCATCTGGAAGCCGATGAAACCTTAGTGGAAGCCGCCGCCCGTGAACTGTGGGAAGAAACCGGCATCAGCGCGCAGCCGCAACACTTTATTCGTATGCATCAGTGGATTGCGCCAGATAAAACGCCGTTTTTGCGTTTCCTCTTTGCCATTGAGCTTGAGCAAATATGCCCGACCCAGCCTCATGACAGCGATATCGACTGCTGCCGTTGGGTCAGCGCCGAAGAAATTTTACAGGCGTCAAATCTTCGTTCGCCGCTGGTGGCGGAAAGTATTCGTTGTTATCAAAGCGGGCAACGTTATCCGCTGGAGATGATTGGCGATTTTAACTGGCCTTTTACAAAGGGTGTCATCTAA", - "dna_sequence_length": 462, - "functions": [ - "bifunctional thiamine pyrimidine pyrophosphate hydrolase and thiamine pyrophosphate hydrolase" - ], - "id": "CDS_1112", - "location": [ - [ - "NC_000913", - 1194288, - "-", - 462 - ] - ], - "md5": "d3fc241df3f0cdef9e57ba3f06e060cd", - "parent_gene": "", - "protein_md5": "307e4dafc622b419abd71db1a90ceebe", - "protein_translation": "MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI", - "protein_translation_length": 153, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1121" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75966" - ], - [ - "gene_synonym", - "JW1121" - ], - [ - "gene_synonym", - "NP_415653.4" - ], - [ - "gene_synonym", - "rluE" - ], - [ - "gene_synonym", - "EcoGene:EG13447" - ], - [ - "gene_synonym", - "ASAP:ABE-0003820" - ], - [ - "gene_synonym", - "GeneID:945701" - ], - [ - "gene_synonym", - "ymfC" - ], - [ - "gene_synonym", - "b1135" - ], - [ - "gene_synonym", - "GI:162135898" - ] - ], - "dna_sequence": "ATGCGGCAATTCATAATCTCTGAAAATACCATGCAAAAAACTTCTTTTAGAAATCACCAGGTTAAGCGATTCAGCTCGCAACGTTCTACCAGGCGTAAACCTGAAAACCAGCCCACGCGTGTGATCCTGTTCAATAAACCCTACGATGTTCTTCCGCAGTTCACCGATGAAGCCGGACGCAAAACATTAAAAGAATTCATCCCGGTTCAGGGTGTTTATGCAGCAGGTCGCCTTGACCGCGATAGCGAAGGGTTGCTGGTGCTGACCAATAACGGCGCGTTGCAGGCGCGTTTAACCCAGCCGGGTAAACGCACCGGAAAAATCTATTATGTGCAGGTGGAAGGTATTCCCACACAAGACGCACTTGAAGCCTTGCGCAATGGCGTAACCTTAAATGATGGCCCTACCCTGCCCGCCGGCGCGGAGCTGGTTGACGAACCCGCGTGGTTATGGCCGCGGAATCCACCAATTCGTGAACGCAAAAGTATTCCCACCAGCTGGCTGAAGATCACCTTATATGAAGGACGTAATCGCCAGGTGCGCCGCATGACCGCCCATGTTGGCTTCCCCACGCTGCGACTGATTCGCTATGCGATGGGTGATTACTCTTTGGATAATCTTGCCAATGGTGAATGGCGAGAAGTGACAGATTAA", - "dna_sequence_length": 654, - "functions": [ - "23S rRNA pseudouridine(2457) synthase" - ], - "id": "CDS_1113", - "location": [ - [ - "NC_000913", - 1194951, - "-", - 654 - ] - ], - "md5": "7a932f615f6cf8713455a68da35e646d", - "parent_gene": "", - "protein_md5": "02ae5257b7d6d50c0741e87f2fa8d4cc", - "protein_translation": "MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD", - "protein_translation_length": 217, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "icdA" - ], - [ - "gene_synonym", - "ECK1122" - ], - [ - "gene_synonym", - "GI:16129099" - ], - [ - "gene_synonym", - "icdE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08200" - ], - [ - "gene_synonym", - "JW1122" - ], - [ - "gene_synonym", - "EcoGene:EG10489" - ], - [ - "gene_synonym", - "icd" - ], - [ - "gene_synonym", - "NP_415654.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003823" - ], - [ - "gene_synonym", - "GeneID:945702" - ], - [ - "gene_synonym", - "b1136" - ] - ], - "dna_sequence": "ATGGAAAGTAAAGTAGTTGTTCCGGCACAAGGCAAGAAGATCACCCTGCAAAACGGCAAACTCAACGTTCCTGAAAATCCGATTATCCCTTACATTGAAGGTGATGGAATCGGTGTAGATGTAACCCCAGCCATGCTGAAAGTGGTCGACGCTGCAGTCGAGAAAGCCTATAAAGGCGAGCGTAAAATCTCCTGGATGGAAATTTACACCGGTGAAAAATCCACACAGGTTTATGGTCAGGACGTCTGGCTGCCTGCTGAAACTCTTGATCTGATTCGTGAATATCGCGTTGCCATTAAAGGTCCGCTGACCACTCCGGTTGGTGGCGGTATTCGCTCTCTGAACGTTGCCCTGCGCCAGGAACTGGATCTCTACATCTGCCTGCGTCCGGTACGTTACTATCAGGGCACTCCAAGCCCGGTTAAACACCCTGAACTGACCGATATGGTTATCTTCCGTGAAAACTCGGAAGACATTTATGCGGGTATCGAATGGAAAGCAGACTCTGCCGACGCCGAGAAAGTGATTAAATTCCTGCGTGAAGAGATGGGGGTGAAGAAAATTCGCTTCCCGGAACATTGTGGTATCGGTATTAAGCCGTGTTCGGAAGAAGGCACCAAACGTCTGGTTCGTGCAGCGATCGAATACGCAATTGCTAACGATCGTGACTCTGTGACTCTGGTGCACAAAGGCAACATCATGAAGTTCACCGAAGGAGCGTTTAAAGACTGGGGCTACCAGCTGGCGCGTGAAGAGTTTGGCGGTGAACTGATCGACGGTGGCCCGTGGCTGAAAGTTAAAAACCCGAACACTGGCAAAGAGATCGTCATTAAAGACGTGATTGCTGATGCATTCCTGCAACAGATCCTGCTGCGTCCGGCTGAATATGATGTTATCGCCTGTATGAACCTGAACGGTGACTACATTTCTGACGCCCTGGCAGCGCAGGTTGGCGGTATCGGTATCGCCCCTGGTGCAAACATCGGTGACGAATGCGCCCTGTTTGAAGCCACCCACGGTACTGCGCCGAAATATGCCGGTCAGGACAAAGTAAATCCTGGCTCTATTATTCTCTCCGCTGAGATGATGCTGCGCCACATGGGTTGGACCGAAGCGGCTGACTTAATTGTTAAAGGTATGGAAGGCGCAATCAACGCGAAAACCGTAACCTATGACTTCGAGCGTCTGATGGATGGCGCTAAACTGCTGAAATGTTCAGAGTTTGGTGACGCGATCATCGAAAACATGTAA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P75967" - ], - [ - "gene_synonym", - "GeneID:945329" - ], - [ - "gene_synonym", - "ASAP:ABE-0003825" - ], - [ - "gene_synonym", - "GI:16129100" - ], - [ - "gene_synonym", - "b1137" - ], - [ - "gene_synonym", - "ymfD" - ], - [ - "gene_synonym", - "NP_415655.1" - ] - ], - "dna_sequence": "ATGGTACTTGCTTTGAACTATAATATGCACGGAGTTAATATTCGCTCAGAGAATGCAGCAAAACCTCATACGATGCCCTCTAGATATCTTTGCGAGTATATTAGAAGCATTGAGAAAAATGGCCACGCCCTTGATTTTGGCTGCGGAAAACTTAGATATTCTGATGAATTAATCAGTAAATTTGATGAAGTTACTTTTCTAGACTCGAAAAGGCAACTTGAAAGAGAGCAAATTATTAGAGGAATTAAAACTAAAATTATTGACTATGTCCCACGATATTATAAAAATGCAAATACAGTTGCTTTCGAGGATGTCGACAAAATAATTGGGGGTTACGATTTCATCCTTTGCTCTAATGTTCTCTCTGCCGTTCCTTGTCGGGATACAATCGACAAAATAGTTCTTAGCATCAAGAGATTACTAAAATCAGGAGGTGAGACTCTTATTGTAAATCAATATAAAAGCTCATACTTCAAAAAATACGAAACAGGAAGAAAACATCTTTACGGATACATTTACAAAAATTCAAAAAGTGTTTCTTACTATGGATTACTCGATGAACTCGCAGTGCAAGAAATATGTTCTTCACATGGCCTTGAAATATTAAAGTCGTGGAGTAAAGCAGGAAGTTCATATGTCACTGTTGGGAGTTGTAATGCAATATAA", - 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"ATGCGCTCACCAATTTGTCATCTTTTCTCAGCAATTAATTCATCACCATTTAAGATTGCACCAGAGAAGGAGCAAGATCTTAAAACGATAGTTGACGACAAAAAAATTATAATTTCAGTTGTGAGTGAACCTGGTTTTAATATCCGAGTCAGGAAGAATGAGAGTAATAATTCACATGAAATAGTTCTAACAGTAGCTTCACTTGAATATATTTGGGCATTTTCCAATTTCTTTTGGGTTTTTACGCAAGAGTACTCCAAATCTCAGAAAAATAATGATGAGCACTTTGATTTAACAGGAAAAAATAGGCTTAAAAAGTCTGATGAACTTCTTAAATGGGCAAGGAAAAACTTGCAAACAACAGGTTGCGAATCATGGCCTAAAAAATGTCCCAAGCCAGAAGCATATTTACAAGGAAGCGAAGACTCACAAGTTGCTAGCGAGATATTTCTTTGTGCTATTGCTTGGATTCTTCATCATGAAATAAGTCATGTTGTTTTACAGCATCCATTGGTCACTACAGCATTCTCCACTCAAGAGGAGCGTGAAGCAGATTCACATGCTACAAAATGGATATTAGGCAACCTGTATGAATCCGCTCCTGAATTAAAGAAACGTGCACTTGGCATTGCTACGGCAGTGCTTTGTATACAAAGCTTAGAAGTTGAAAATTACTTCTGTTTACAAAATACACACCCAGCTGCATATGAGCGTATATATTCGAATATTTCATGCTACCCTGTCGGAAATGAAGAGTTGATTGAAGCTCTATGTACAGTGATGCTTCAATATCTTTTCCATGGCAAAAATATCAATGTGAATCTAGATGGGGAGTCCTTTTCATCGATTTTAGGTGATCTTCTCTGTGATATTTCACGTCTTACCAGTAACTGA", - "dna_sequence_length": 894, - "functions": [ - "T4 phage exclusion protein", - "cell death 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"GI:16129103" - ], - [ - "gene_synonym", - "ASAP:ABE-0003836" - ], - [ - "gene_synonym", - "ycfI" - ], - [ - "gene_synonym", - "GeneID:948034" - ] - ], - "dna_sequence": "ATGGCAGCCAGACCGCGTAAGAATAATGTTTCAGTCCCTAACTTATATCCGCTTTATAGTAGGAAGGTAAATAAAGTCTATTGGCGGTATAAGCATCCAGTGACAGGAAAATTCCATGCTTTGGGAACAAACGAAGCTGAAGCTATCGCTATTGCCACTGAGGCCAACACTCGCCTGGCTGAACAAAGAACCCGGCAGATTCTGGCTATCAGTGACAGGATCGCAACCAGCAAAGGAAAGGCTATCACAACGTCAACCTGGTTAGATCGCTATCAAGCGATCCAGGATGACAGGCTTAAAAGTGGTGATATAAGACTCAACACCTATAAACAAAAAGCTAAACCAGTATCCTTGCTCAGAGAACGAGCAGGAATGAAGTTGATCTCAGCCGTTGATGTCAGAGATATAGCACAATTGCTTGATGAGTATATCGCCGCTGGGCGGCCAAGAATGGCACAAGTAGTTCGCTCCGTCCTGATTGATGTTTTCAAAGAGGCGCAGCACTACGGAGAAGTACCTCCTGGCTATAACCCAGCATTAGCCACTAAACAACCAAGAAGAAAAATTACCCGACAACGGCTGAGCCTTGAAGAATGGAAAAAAATCTTCGATATCGCAGACGCTACTCATCGTTACATGGGAAATGCCATGCTGTTAGCGCTGGTTACTGGTCAGCGGTTAGGTGATATTTCGCGTATGAAATTTAGCGATATTTGGGATGATCATCTTCATGTCATTCAGGAAAAGACCGGGAGCAAAATCGCAATTCCTCTTTCTCTTCGCCTCAATGCGATTAACTGGAGTTTACGCGATGTAGTAGCCCGCTGCCGTGACTATGCAGTCAGTGCATACTTAGTGCATTTTTTTCGTTCAACTTCACAAGCAGAGCGCGGAGCGCAGGTTAAAGCCAATACATTGACGATGAATTTTAGTAAAGCGAGAGATTTAGCAAGAATTGACTGGGGAGAGGGTTCACCTGCGACATTCCATGAGCAAAGGTCTTTATCTGAACGTCTGTATAAAGAACAGGGGTTAGACACACAAAAACTACTTGGTCATAAAACACAACAACAAACCGATCGTTATCATGATGATCGAGGTAAAGGATGGAGCAAAGTAGCGTTGTGA", 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"EcoGene:EG14245" - ], - [ - "gene_synonym", - "xisE" - ], - [ - "gene_synonym", - "GI:16129104" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75970" - ], - [ - "gene_synonym", - "ASAP:ABE-0003838" - ], - [ - "gene_synonym", - "GeneID:945705" - ], - [ - "gene_synonym", - "ymfG" - ] - ], - "dna_sequence": "ATGCTTCAAATGTTAACTCTTGAAGAATGGGCTGCTGAAAAATACAGAAGTAATCCTCCAAGTGTGTCCACATTGCGTCGTTATGCTAAGCAGAATTTATTTTGTCCACCGGCCATGAAACAAGGCCGGTTATGGCGAGTGCGTGAGGACGCCGAGTTAGTTGGGGAGTTGGTAACACCTGTAATCAAGAAAAATGACTCATTACTTTTGCAACGGATTTTGAGTAATGGCAGCCAGACCGCGTAA", - "dna_sequence_length": 246, - "functions": [ - "e14 prophage", - "putative excisionase" - ], - "id": "CDS_1119", - "location": [ - [ - "NC_000913", - 1201032, - "-", - 246 - ] - ], - "md5": "6f50d6007b7845da36aa9ffd2bc9292d", - "parent_gene": "", - "protein_md5": "450ad63af74e37ebb3b99b00debf7175", - "protein_translation": "MLQMLTLEEWAAEKYRSNPPSVSTLRRYAKQNLFCPPAMKQGRLWRVREDAELVGELVTPVIKKNDSLLLQRILSNGSQTA", - "protein_translation_length": 81, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75972" - ], - [ - "gene_synonym", - "NP_415661.2" - ], - [ - "gene_synonym", - "ECK1129" - ], - [ - "gene_synonym", - "JW5168" - ], - [ - "gene_synonym", - "EcoGene:EG14247" - ], - [ - "gene_synonym", - "b1143" - ], - [ - "gene_synonym", - "ymfI" - ], - [ - "gene_synonym", - "ASAP:ABE-0003846" - ], - [ - "gene_synonym", - "GI:90111220" - ], - [ - "gene_synonym", - "GeneID:945712" - ] - ], - "dna_sequence": "ATGAACCAGTTTTATGTTCACGTTCGTCTATTTGAAGACACAGCCGAACAGACCAAAAAATTTGAAGAATTAATGCTTAACTTTCTGTACCAGAAAACAGTTAAAGAGTCTGACGATAGCTGCTGCAGACTGATTCCAGAGGGATATATCCTCAAAAGTACAATGAACTGCCAACAAATCCTTGATCAAACATTTTCAATTGCTAACAGTGCCGGTGTTGACGCAAATATATTTGTCTGTAAATTTGAACAAAGCGCATGCTTACTTCCGTCTGCTTCCTTAGTTGGTAACGATTTCGTTCATTACGATCTTACGCCTAAGCCCATCAAGCTCGATTCTTAA", - "dna_sequence_length": 342, - "functions": [ - "e14 prophage", - "uncharacterized protein" - ], - "id": "CDS_1120", - "location": [ - [ - "NC_000913", - 1201497, - "+", - 342 - ] - ], - "md5": "c95e1b78e728e22fb8d89333e4ef1864", - "parent_gene": "", - "protein_md5": "9a8e20c70adadde8d51001fa55254a2e", - "protein_translation": "MNQFYVHVRLFEDTAEQTKKFEELMLNFLYQKTVKESDDSCCRLIPEGYILKSTMNCQQILDQTFSIANSAGVDANIFVCKFEQSACLLPSASLVGNDFVHYDLTPKPIKLDS", - "protein_translation_length": 113, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14248" - ], - [ - "gene_synonym", - "ECK1130" - ], - [ - "gene_synonym", - "b1144" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75973" - ], - [ - "gene_synonym", - "NP_415662.2" - ], - [ - "gene_synonym", - "ymfJ" - ], - [ - "gene_synonym", - "GeneID:945718" - ], - [ - "gene_synonym", - "ASAP:ABE-0003848" - ], - [ - "gene_synonym", - "GI:90111221" - ] - ], - "dna_sequence": "ATGAATGAGCAGAATTTGAAGCATGTGATCGCATTGTTGCTGGAAGACGCTAAACGTTTGCAGCAGATAGAGCCAAATGCAGGCACTGAGGCCCGCATTTTGTTAGCAAAACAGGCATTAAAGACTTGCGGGGCGCAAGCCCCTGGTCGAACCGAGTTCATGAATTTCATGGCTAACACACTCACCCCTCTGCCATGCAATGGAGAGAAGGTGAGCCGTGTTTATCACGACACAATGGTTAAGGCTTTAAGAATCGAGCTTGATGGGCTTAGGCGTAAGATCGTAATGAACGAAATCGTTACCAACTAA", - "dna_sequence_length": 309, - "functions": [ - "e14 prophage", - "uncharacterized protein" - ], - "id": "CDS_1121", - "location": [ - [ - "NC_000913", - 1202084, - "-", - 309 - ] - ], - "md5": "9c65d493bd8816200f57ea3f80549df5", - "parent_gene": "", - "protein_md5": "72f8df15661048b8413c8a743c15d63b", - "protein_translation": "MNEQNLKHVIALLLEDAKRLQQIEPNAGTEARILLAKQALKTCGAQAPGRTEFMNFMANTLTPLPCNGEKVSRVYHDTMVKALRIELDGLRRKIVMNEIVTN", - "protein_translation_length": 102, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415663.1" - ], - [ - "gene_synonym", - "ECK1131" - ], - [ - "gene_synonym", - "EcoGene:EG14249" - ], - [ - "gene_synonym", - "GeneID:945719" - ], - [ - "gene_synonym", - "b1145" - ], - [ - "gene_synonym", - "JW1131" - ], - [ - "gene_synonym", - "cohE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75974" - ], - [ - "gene_synonym", - "ymfK" - ], - [ - "gene_synonym", - "ASAP:ABE-0003851" - ], - [ - "gene_synonym", - "GI:16129108" - ] - ], - "dna_sequence": "ATGAAAACAATCCATGACATCCGGCGGTCTAACGCCAGAAAACTGAGAGATGGTGTTGGCGGGAATTCTTCCTTTGCCACTATGATTGATCGCGAGCCAACCCAGACCAGCAGGTTTATGGGAGATGGTGCTACTAAAAATATCGGTGACAGCATGGCACGACACATCGAAAAATGTTTCGACCTGCCTGTAGGATGGCTCGATCAAGAACACCAGACAACGAACATCACAAAAAAACCTGATGTTTCAATCACTAATAAACAAATCACATTAGTCCCTGTCATATCATGGGTACAGGCCGGAGCATGGAAAGAAGTTGGATATTCTGAGGTTGATTTGAGCACAGCAGAAACGTATCCCTGCCCTGTACCCTGTGGGGAAATGACTTATATCTTGCGGGTAATAGGTGATTCAATGATTGATGAGTACCGCCCGGGAGACATGATTTTTGTCGATCCTGAAGTACCTGCCTGCCACGGTGACGACGTTATTGCATTGATGCACGATACAGGTGAAACCACCTTCAAAAGGTTGATAGAAGATGGGACACAGCGTTATCTCAAAGCGTTAAACCCAAACTGGCCTGAGCCTTACATTAAGATCAACGGTAATTGCTCTATAATTGGTACTGTGATTTTCTCAGGAAAACCAAGAAGATACAAAATCAAAGCCTAA", - 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"gene_synonym", - "GI:90111222" - ], - [ - "gene_synonym", - "croE" - ], - [ - "gene_synonym", - "ECK4469" - ] - ], - "dna_sequence": "ATGAAAGCGTATTGGGACTCTTTAACCAAAGAACAGCAGGGCGAGTTGGCCGGAAAAGTTGGCTCAACACCTGGCTACTTACGGCTGGTTTTCAATGGCTATAAAAAAGCCAGTTTTGTGCTGGCTAAAAAACTTGAGCAATACACATCAGGTGCAATTACGAAATCTGACTTAAGACCGGATATCTATCCGAAAGATTAG", - "dna_sequence_length": 201, - "functions": [ - "e14 prophage", - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_1123", - "location": [ - [ - "NC_000913", - 1203024, - "+", - 201 - ] - ], - "md5": "3a658331630b04f9e8844cd5efc06e95", - "parent_gene": "", - "protein_md5": "a9e0b168bbc9bd2471330d3db508949b", - "protein_translation": "MKAYWDSLTKEQQGELAGKVGSTPGYLRLVFNGYKKASFVLAKKLEQYTSGAITKSDLRPDIYPKD", - "protein_translation_length": 66, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1133" - ], - [ - "gene_synonym", - "b1147" - ], - [ - "gene_synonym", - "ASAP:ABE-0003860" - ], - [ - "gene_synonym", - "EcoGene:EG14250" - ], - [ - "gene_synonym", - "JW1133" - ], - [ - "gene_synonym", - "ymfL" - ], - [ - "gene_synonym", - "GeneID:945717" - ], - [ - "gene_synonym", - "GI:145698241" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75976" - ], - [ - "gene_synonym", - "NP_415665.2" - ] - ], - "dna_sequence": "GTGGGTAAGCATCACTGGAAAATAGAAAAACAGCCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCGTTGCCGAGTGGTTACGCTGAAGCGGCTGACTGGCTCGATGTAACAGAAAACGCTTTATTCAACCGCCTTCGTGCAGATGGCGATCAGATTTTCCCGCTGGGATGGGCAATGGTTTTACAGCGTGCTGGTGGCACTCACTTCATTGCTGATGCTGTGGCGCAGTCTGCAAATGGCGTCTTTGTGTCTCTTCCTGACGTCGAGGATGTGGACAACGCCGATATTAACCAGCGTCTGCTGGAAGTCATTGAACAGATCGGCAGTTATTCAAAACAGATTCGTTCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGA", - "dna_sequence_length": 558, - "functions": [ - "e14 prophage", - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_1124", - "location": [ - [ - "NC_000913", - 1203268, - "+", - 558 - ] - ], - "md5": "f42ae96daa8b7ff14ab9a8e8d0482afb", - "parent_gene": "", - "protein_md5": "197cd0ccaf605704832ba9b879a760ec", - "protein_translation": "MGKHHWKIEKQPEWYVKAVRKTIAALPSGYAEAADWLDVTENALFNRLRADGDQIFPLGWAMVLQRAGGTHFIADAVAQSANGVFVSLPDVEDVDNADINQRLLEVIEQIGSYSKQIRSAIEDGVVEPHEKTAINDELYLSISKLQEHAALVYKIFCISESNDARECAAPGVVASIASGCGETNA", - "protein_translation_length": 185, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1148" - ], - [ - "gene_synonym", - "ECK1134" - ], - [ - "gene_synonym", - "JW1134" - ], - [ - "gene_synonym", - "NP_415666.1" - ], - [ - "gene_synonym", - "EcoGene:EG14251" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75977" - ], - [ - "gene_synonym", - "GI:16129111" - ], - [ - "gene_synonym", - "ymfM" - ], - [ - "gene_synonym", - "ASAP:ABE-0003862" - ], - [ - "gene_synonym", - "GeneID:945715" - ] - ], - "dna_sequence": "ATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGAATGTACCAGGTGACAGGGAAATTGTAACCCACAGCTTTGCAGAGTGGGCTGTGGGTGATTTCAACCGGCAGAAGGAGACAGTCCTTTGCGACAAGTTAACCGCTGGTTCAAAGATCACTACGGAGTGCCCGTCAGAGTCATTCGTTGGGAGCCGGAAACACAACGGGTTATCTACCTCCGCGAAGGTTATGAGCATGAATGCTTCAGCCCGCTCGAACAGTTTCGTCGTAAATTCAGGGAAATAG", - "dna_sequence_length": 339, - "functions": [ - "e14 prophage", - "uncharacterized protein" - ], - "id": "CDS_1125", - "location": [ - [ - "NC_000913", - 1203822, - "+", - 339 - ] - ], - "md5": "f083534c1947f6965067fee1dd7bcac9", - "parent_gene": "", - "protein_md5": "e6139b0809a25a82d23ae3d5594dfbfa", - "protein_translation": "MNSLTTHYRRSQLIALPVPGGKAKVEYCYAVNVPGDREIVTHSFAEWAVGDFNRQKETVLCDKLTAGSKITTECPSESFVGSRKHNGLSTSAKVMSMNASARSNSFVVNSGK", - "protein_translation_length": 112, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "oweE" - ], - [ - "gene_synonym", - "GeneID:7751644" - ], - [ - "gene_synonym", - "b4692" - ], - [ - "gene_synonym", - "EcoGene:EG14495" - ], - [ - "gene_synonym", - "ECK4507" - ] - ], - "dna_sequence": "ATGAGCACTAAATTAACCGGCTATGTATGGGATGGTTGCGCTGCATCAGGCATGAAGTTATCCAGCGTGGCAATTATGGCCCGCCTGGCTGATTTCAGTAATGACGAAGGTGTGTGCTGGCCATCAATTGAAACCATTGCCCGTCAGATTGGCGCGGGGATGAGTACCGTCAGAACGGCTATCGCACGGCTGGAAGCAGAAGGCTGGTTAACGCGTAAGGCGCGTCGCCAGGGT", - "dna_sequence_length": 234, - "id": "CDS_1126", - "location": [ - [ - "NC_000913", - 1204170, - "+", - 234 - ] - ], - "md5": "839a750bc4f3e4ad07b19edafca8fe03", - "parent_gene": "", - "protein_md5": "c019a308e7bd5f4246aee9b91ca66f9f", - "protein_translation": "MSTKLTGYVWDGCAASGMKLSSVAIMARLADFSNDEGVCWPSIETIARQIGAGMSTVRTAIARLEAEGWLTRKARRQG", - "protein_translation_length": 78, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75978" - ], - [ - "gene_synonym", - "ECK1135" - ], - [ - "gene_synonym", - "JW1135" - ], - [ - "gene_synonym", - "ASAP:ABE-0003865" - ], - [ - "gene_synonym", - "EcoGene:EG14252" - ], - [ - "gene_synonym", - "aaaE" - ], - [ - "gene_synonym", - "ymfN" - ], - [ - "gene_synonym", - "b4693" - ], - [ - "gene_synonym", - "GeneID:7751645" - ] - ], - "dna_sequence": 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"gene_synonym", - "EcoGene:EG14336" - ], - [ - "gene_synonym", - "GI:16129113" - ], - [ - "gene_synonym", - "GeneID:945700" - ], - [ - "gene_synonym", - "JW1136" - ] - ], - "dna_sequence": "ATGATCATGCTGATTCTCGCGCCTCTGGTGGGCGTGCTGGGTGCGCTTTTGCTGGCGTATGGTGCCTGGCTGATTTATCCCCCGGCGGGTTTTGTTGTTGCCGGGGCGCTGTGCCTGTTCTGGTCGTGGCTGGTGGCGCGATATCTCGACCGTACACAGTCGTCTGTCGGCGGAGGTAAATAG", - "dna_sequence_length": 183, - "functions": [ - "e14 prophage", - "uncharacterized protein" - ], - "id": "CDS_1128", - "location": [ - [ - "NC_000913", - 1205549, - "+", - 183 - ] - ], - "md5": "5cfdcb2b8dd5d02e705df84482340a91", - "parent_gene": "", - "protein_md5": "3252a72f6433c82ffb3652bd3fc09dc1", - "protein_translation": "MIMLILAPLVGVLGALLLAYGAWLIYPPAGFVVAGALCLFWSWLVARYLDRTQSSVGGGK", - "protein_translation_length": 60, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75980" - ], - [ - "gene_synonym", - "GeneID:945698" - ], - [ - "gene_synonym", - "ECK1137" - ], - [ - "gene_synonym", - "beeE" - ], - [ - "gene_synonym", - "ASAP:ABE-0003870" - ], - [ - "gene_synonym", - "JW1137" - ], - [ - "gene_synonym", - "EcoGene:EG14253" - ], - [ - "gene_synonym", - "b1151" - ], - [ - "gene_synonym", - "ymfO" - ] - ], - "dna_sequence": "GTGTTCTTTTCGGGATTATTTCAACGAAAAAGTGACGCACCGGTGACCACGCCAGCAGAGCTGGCGGATGCCATCGGGCTGTCGTATGACACCTATACCGGAAAGCAGATCAGCAGTCAGCGGGCTATGCGACTGACGGCGGTTTTTTCCTGCGTCAGAGTGCTGGCAGAGTCGGTCGGGATGTTGCCCTGCAATCTGTATCACCTGAACGGCAGCCTGAAGCAGAGAGCCACCGGCGAACGTCTGCATAAACTGATCTCCACGCATCCCAATGGCTATATGACGCCGCAGGAGTTCTGGGAGCTGGTGGTCACCTGTCTGTGCCTGAGGGGAAACTTTTACGCCTACAAAGTGAAAGCATTTGGCGAAGTGGCTGAACTGCTGCCCGTCGATCCCGGCTGTGTGGTATATG", - "dna_sequence_length": 412, - "id": "CDS_1129", - "location": [ - [ - "NC_000913", - 1205731, - "+", - 412 - ] - ], - "md5": "5a75c9b3fe59199fc344865fd1ce7ba9", - "parent_gene": "", - "protein_md5": "d11420117a6799cf164fcf7f21f94750", - "protein_translation": "VFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKAFGEVAELLPVDPGCVVY", - "protein_translation_length": 137, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75981" - ], - [ - "gene_synonym", - "JW5170" - ], - [ - "gene_synonym", - "ymfP" - ], - [ - "gene_synonym", - "EcoGene:EG14254" - ], - [ - "gene_synonym", - "ASAP:ABE-0003872" - ], - [ - "gene_synonym", - "ECK1138" - ], - [ - "gene_synonym", - "b1152" - ], - [ - "gene_synonym", - "jayE" - ], - [ - "gene_synonym", - "GeneID:945703" - ] - ], - "dna_sequence": "CGCTGGGAAGGTGTCAGCGATGGCCTGAAGGTGACCGCCGGGAGTGTTATTCAGCGCGATGACCTGGTGCAGTACACGACAACTGACGATGCAACCAGCTCCGGTGGTGTCCTGCGCGTGCCGATCGCCTGCTCAAGTGCAGGTGCGGTCGGTAACGCTGACGACGGTACGGCATTAATCCTGGTCACGCCGGTGAATGGTCTGCCGTCTTCCGGTGTGGCTGACACCCTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAACGGCGGCAAGACAACATATCGGGCCACTGGCCCCGGTGGCAGGCTCTGATTTGTATGTGTTCAGGCCGGTGGCACATACGGTGGATTTTCATATCCGCGTGACGCCGGACACACCAGAAATACGGGCTGCCATTACCGCGGAGTTGCGTTCGTTCCTGCTGCGTGATGGTTATCCGCAGGGAGAACTCAAGGTATCGCGTATCAGTGAGGCGATTTCCGGTGCGAACGGGGAATACAGCCATCAGTTGCTTGCACCGGTGGACAATATCTCCATTGCGAAAAACGAACTGGCGGTACTGGGGACGATTTCATGGACGTGA", - "dna_sequence_length": 780, - "id": "CDS_1130", - "location": [ - [ - "NC_000913", - 1206143, - "+", - 780 - ] - ], - "md5": "54a83a8a8cda89dbc22ac6507637ca72", - "parent_gene": "", - "protein_md5": "cc78ad8441b9933c5ce93a6c831196d4", - "protein_translation": "RWEGVSDGLKVTAGSVIQRDDLVQYTTTDDATSSGGVLRVPIACSSAGAVGNADDGTALILVTPVNGLPSSGVADTLTGGFDTEELETWRARVIERYYWTPQGGADGDYVVWAKEVPGITRAWTYRHLMGTGTVGVMIASSDLINPIPEESTETAARQHIGPLAPVAGSDLYVFRPVAHTVDFHIRVTPDTPEIRAAITAELRSFLLRDGYPQGELKVSRISEAISGANGEYSHQLLAPVDNISIAKNELAVLGTISWT", - "protein_translation_length": 259, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75982" - ], - [ - "gene_synonym", - "JW1139" - ], - [ - "gene_synonym", - "EcoGene:EG14255" - ], - [ - "gene_synonym", - "ymfQ" - ], - [ - "gene_synonym", - "ECK1139" - ], - [ - "gene_synonym", - "ASAP:ABE-0003874" - ], - [ - "gene_synonym", - "NP_415671.1" - ], - [ - "gene_synonym", - "b1153" - ], - [ - "gene_synonym", - "GI:16129116" - ], - [ - "gene_synonym", - "GeneID:945707" - ] - ], - "dna_sequence": "ATGGACGTGACAAACGATGATTACATCCGCCTGTTATCGGCACTGTTGCCGCCCGGTCCGGTGTGGTCAGCCAGCGATCCGGCGATTGCCGGTGCGGCACCGTCATTAACCCGTGTTCATCAGCGTGCGGATGCCCTGATGCGGGAGCTGGATCCGCGCACCACCACTGAACTGATAAACCGCTGGGAGCGTCTGTGCGGTCTGCCGGATGAATGTATTCCGGCGGGAACGCAGACCCTTCGCCAGCGTCAGCAACGGCTGGATGCGAAGGTTAACCTGGCGGGCGGCATCAACGAGGATTTTTATCTTGCACAGCTTGCTGCCCTGGGCAGACCAGATGCCACCATCACGCGATACGACAAAAGCACTTTCACCTGCTCATCGGCCTGTACTGACGCGGTGAATGCGCCGGAATGGCGGTATTACTGGCAGGTCAACATGCCAGCCACCACCAACTCCACCTGGATGACATGTGGCGATCCCTGTGATTCCGCACTGCGTATCTGGGGTGACACCGTTGTCGAGTGTGTGCTTAACAAACTCTGCCCGTCGCATACCTACGTAATTTTTAAATATCCGGAGTAA", - "dna_sequence_length": 585, - "functions": [ - "prohage e14 tail protein homolog" - ], - "id": "CDS_1131", - "location": [ - [ - "NC_000913", - 1206913, - "+", - 585 - ] - ], - "md5": "9db846b6711bba168438057386cdd561", - "parent_gene": "", - "protein_md5": "0413a8cc726bee7b246b5530b1030698", - "protein_translation": 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"ATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGTGCGCAGCTCAAACGGGTAGTTATTACTATAACTGGATTGCTATTGGGTATTAA", - "dna_sequence_length": 630, - "functions": [ - "e14 prophage", - "uncharacterized protein" - ], - "id": "CDS_1132", - "location": [ - [ - "NC_000913", - 1207501, - "+", - 630 - ] - ], - "md5": "a7540343a6704a43c4d14ec0fcff8066", - "parent_gene": "", - "protein_md5": "6cc98ea6c834f284f178d915e1343173", - "protein_translation": "MHRIDTKTAQKDKFGAGKNGFTRGNPQTGTPATDLDDDYFDMLQEELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKSDGTVQTALENLGLGEGAKLNAATATLGRTGFIAIPVMIGGIEQSVIIQWGWNAAKASASGGDGNTVVFPVAFNNACVAVVANYDNVSAPINAVATGGYTTTSFLLRCAAQTGSYYYNWIAIGY", - "protein_translation_length": 209, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003878" - ], - [ - "gene_synonym", - "ymfS" - ], - [ - "gene_synonym", - "JW5171" - ], - [ - "gene_synonym", - "GeneID:945724" - ], - [ - "gene_synonym", - "ECK1141" - ], - [ - "gene_synonym", - "b1155" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09154" - ], - [ - "gene_synonym", - "EcoGene:EG14337" - ], - [ - "gene_synonym", - "GI:16129118" - ], - [ - "gene_synonym", - "tfaP" - ], - [ - "gene_synonym", - "NP_415673.1" - ] - ], - "dna_sequence": "ATGAAAATATACTGTTGCTTAAATACCGTTGGTTTTTTTATGGATGGCTGTGGCGTCATTCCGCCAGATTCTAAAGAAATAACGGCAGAACACTGGCAGTCATTATTAAAATCTCAAGCTGAAGGAGGCGTGATCGATTTTTCTGTTTTTCCTCCTTCTATTAAAGAGGTTATCCGTACTCATGATGATGAAGTCGCAGATGCGAACTTTCAAAAGCAGATGCTTATCTCTGATGCAACTGATTTTATCAATAGCAGACAGTGGCAGGGTAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCGCCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGA", - "dna_sequence_length": 414, - "functions": [ - "e14 prophage", - "uncharacterized protein" - ], - "id": "CDS_1133", - "location": [ - [ - "NC_000913", - 1208132, - "+", - 414 - ] - ], - "md5": "37bbfcaf748528d347ee1fa7d45834d1", - "parent_gene": "", - "protein_md5": "96e39427a035ca1baf844d56b0af3439", - "protein_translation": "MKIYCCLNTVGFFMDGCGVIPPDSKEITAEHWQSLLKSQAEGGVIDFSVFPPSIKEVIRTHDDEVADANFQKQMLISDATDFINSRQWQGKAALGRLKEDELKQYNLWLDYLEALELVDTSSAPDIEWPTPPAVQAR", - "protein_translation_length": 137, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945723" - ], - [ - "gene_synonym", - "ECK1142" - ], - [ - "gene_synonym", - "ASAP:ABE-0003880" - ], - [ - "gene_synonym", - "b1156" - ], - [ - "gene_synonym", - "tfaE" - ], - [ - "gene_synonym", - "NP_415674.1" - ], - [ - "gene_synonym", - "EcoGene:EG11120" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09153" - ], - [ - "gene_synonym", - "GI:16129119" - ], - [ - "gene_synonym", - "JW1142" - ], - [ - "gene_synonym", - "ycfA" - ] - ], - "dna_sequence": "ATGCATAAAGCAATATTAAATAGTGACCTTATTGCAACAAAGGCAGGGGATGTTACCGTTTATAACTACGATGGTGAAACACGGGAATATATTTCCACTTCAAATGAATATCTTGCCGTTGGTGTCGGCATTCCGGCATGTTCCTGTTTAGATGCCCCTGGTACACATAAGGCTGGTTATGCAATCTGCCGTTCTGCAGATTTTAACTCATGGGAATATGTGCCAGACCATCGCGGTGAAACGGTCTATAGCACCAAAACTGGAGAATCAAAAGAAATCAAAGCTCCGGGTGATTACCCTGAAAATACAACCACTATCGCCCCTTTATCTCCATACGATAAATGGGATGGTGAGAAATGGGTGACCGATACTGAAGCACAGCATAGCGCCGCAGTAGACGCGGCAGAAGCACAGCGCCAGTCACTGATTGATGCTGCAATGGCTTCCATTAGTCTGATTCAACTGAAATTGCAGGCCGGACGTAAACTGACGCAGGCAGAAACAACCAGACTTAACGCTGTGCTGGATTACATTGACGCGGTGACGGCAACAGATACCAGCACCGCGCCGGATGTCATCTGGCCTGAACTGCCGGAGGCGTAG", - "dna_sequence_length": 603, - "functions": [ - "e14 prophage", - "putative tail fiber assembly protein" - ], - "id": "CDS_1134", - "location": [ - [ - "NC_000913", - 1209119, - "-", - 603 - ] - ], - "md5": "d318ec906008b70f817d950a8da996be", - "parent_gene": "", - "protein_md5": "5e5d906cf255ee9cac5a6946c985b2d3", - "protein_translation": "MHKAILNSDLIATKAGDVTVYNYDGETREYISTSNEYLAVGVGIPACSCLDAPGTHKAGYAICRSADFNSWEYVPDHRGETVYSTKTGESKEIKAPGDYPENTTTIAPLSPYDKWDGEKWVTDTEAQHSAAVDAAEAQRQSLIDAAMASISLIQLKLQAGRKLTQAETTRLNAVLDYIDAVTATDTSTAPDVIWPELPEA", - "protein_translation_length": 200, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945722" - ], - [ - "gene_synonym", - "stfE" - ], - [ - "gene_synonym", - "ECK1143" - ], - [ - "gene_synonym", - "JW5172" - ], - [ - "gene_synonym", - "ASAP:ABE-0003882" - ], - [ - "gene_synonym", - "b1157" - ], - [ - "gene_synonym", - "EcoGene:EG11818" - ], - [ - "gene_synonym", - "ycfE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33227" - ] - ], - "dna_sequence": "GTTGGTTTGGGAGAAGGCTCTGCATTACCTGTTGGTGTCCCGGTTCCGTGGCCTTCAGCCACTCCGCCAACAGGCTGGCTGAAATGCAATGGTGCCGCTTTTTCTGCTGAAGAATACCCGGAACTGGCAAAGGCTTATCCGACAAATAAATTGCCTGATTTACGTGGTGAGTTTATTCGTGGCTGGGATGACGGGCGGGGGATTGATACAGGTCGCTCTATTTTAAGTATTCAGGGGTATGCAACGGAGGATCATGCTCATGGATTACCGTCAAGATCCACGATTGTGACTGATGCAACGATTAATTTCTATTTTGATGAAATATGGGTAAATAGTGGCACTGACATTATCAAAAGAGGAAACACAAACGATGCCGGATTACCAGCCCCGGATTATGGAACCTTTAAAACATATAAACAATCAGTGGATGGTTTAGGTGCCGCAGCCTCAGAAACGCGTCCGCGTAATATTGCATTTAACTATATCGTGAGGGCAGCCTGA", - "dna_sequence_length": 501, - "id": "CDS_1135", - "location": [ - [ - "NC_000913", - 1209619, - "-", - 501 - ] - ], - "md5": "51d25062353b8c658e0f6fc1cd85277e", - "parent_gene": "", - "protein_md5": "85c06ba0f5374d69ecd7ac794d44fcba", - "protein_translation": "VGLGEGSALPVGVPVPWPSATPPTGWLKCNGAAFSAEEYPELAKAYPTNKLPDLRGEFIRGWDDGRGIDTGRSILSIQGYATEDHAHGLPSRSTIVTDATINFYFDEIWVNSGTDIIKRGNTNDAGLPAPDYGTFKTYKQSVDGLGAAASETRPRNIAFNYIVRAA", - "protein_translation_length": 166, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1144" - ], - [ - "gene_synonym", - "GeneID:945721" - ], - [ - "gene_synonym", - "b1158" - ], - [ - "gene_synonym", - "pin" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03014" - ], - [ - "gene_synonym", - "EcoGene:EG10737" - ], - [ - "gene_synonym", - "ASAP:ABE-0003888" - ], - [ - "gene_synonym", - "pinE" - ], - [ - "gene_synonym", - "GI:16129121" - ], - [ - "gene_synonym", - "JW1144" - ], - [ - "gene_synonym", - "NP_415676.1" - ] - ], - "dna_sequence": "ATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGTGACACTCTGGTTGTCTGGAAGCTGGATCGGCTGGGGCGTAGTATGCGGCATCTTGTCGTGCTGGTGGAGGAGTTGCGCGAACGAGGCATCAACTTTCGTAGTCTGACGGATTCAATTGATACCAGCACACCAATGGGACGCTTTTTCTTTCATGTGATGGGTGCCCTGGCTGAAATGGAGCGTGAACTGATTGTTGAACGAACAAAAGCTGGACTGGAAACTGCTCGTGCACAGGGACGAATTGGTGGACGTCGTCCCAAACTTACACCAGAACAATGGGCACAAGCTGGACGATTAATTGCAGCAGGAACTCCTCGCCAGAAGGTGGCGATTATCTATGATGTTGGTGTGTCAACTTTGTATAAGAGGTTTCCTGCAGGGGATAAATAA", - "dna_sequence_length": 555, - "functions": [ - "e14 prophage", - "site-specific DNA recombinase" - ], - "id": "CDS_1136", - "location": [ - [ - "NC_000913", - 1209685, - "+", - 555 - ] - ], - "md5": "ac1206954c399ee46ad7be25e3ad850c", - "parent_gene": "", - "protein_md5": "ac14535ab57d70334ef322472f6f8bd6", - "protein_translation": "MLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVVWKLDRLGRSMRHLVVLVEELRERGINFRSLTDSIDTSTPMGRFFFHVMGALAEMERELIVERTKAGLETARAQGRIGGRRPKLTPEQWAQAGRLIAAGTPRQKVAIIYDVGVSTLYKRFPAGDK", - "protein_translation_length": 184, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24200" - ], - [ - "gene_synonym", - "ECK1145" - ], - [ - "gene_synonym", - "GeneID:945727" - ], - [ - "gene_synonym", - "b1159" - ], - [ - "gene_synonym", - "EcoGene:EG10573" - ], - [ - "gene_synonym", - "rglA" - ], - [ - "gene_synonym", - "ASAP:ABE-0003891" - ], - [ - "gene_synonym", - "GI:16129122" - ], - [ - "gene_synonym", - "JW1145" - ], - [ - "gene_synonym", - "NP_415677.1" - ], - [ - "gene_synonym", - "mcrA" - ] - ], - "dna_sequence": "ATGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAGGATGGTGTTTATGGTCTAATCCTTGAGTCGTGGGGGCCGGGTGACAGAAACAAAGATTACAATATCGCTCTTGATTATATCATTGAACGGTTGGTTGATTCTGGTGTATCCCAAGTCGTAGTATATCTGGCGTCATCATCAGTCAGAAAACATATGCATTCTTTGGATGAAAGAAAAATCCATCCTGGTGAATATTTTACTTTGATTGGTAATAGCCCCCGCGATATACGCTTGAAGATGTGTGGTTATCAGGCTTATTTTAGTCGTACGGGGAGAAAGGAAATTCCTTCCGGCAATAGAACGAAACGAATATTGATAAATGTTCCAGGTATTTATAGTGACAGTTTTTGGGCGTCTATAATACGTGGAGAACTATCAGAGCTTTCACAGCCTACAGATGATGAATCGCTTCTGAATATGAGGGTTAGTAAATTAATTAAGAAAACGTTGAGTCAACCCGAGGGCTCCAGGAAACCAGTTGAGGTAGAAAGACTACAAAAAGTTTATGTCCGAGACCCGATGGTAAAAGCTTGGATTTTACAGCAAAGTAAAGGTATATGTGAAAACTGTGGTAAAAATGCTCCGTTTTATTTAAATGATGGAAACCCATATTTGGAAGTACATCATGTAATTCCCCTGTCTTCAGGTGGTGCTGATACAACAGATAACTGTGTTGCCCTTTGTCCGAATTGCCATAGAGAATTGCACTATAGTAAAAATGCAAAAGAACTAATCGAGATGCTTTACGTTAATATAAACCGATTACAGAAATAA", - "dna_sequence_length": 834, - "functions": [ - "putative 5-methylcytosine/5-hydroxymethylcytosine-specific restriction nuclease", - "5-methylcytosine DNA binding protein" - ], - "id": "CDS_1137", - "location": [ - [ - "NC_000913", - 1210346, - "+", - 834 - ] - ], - "md5": "98627fe30a9b0ebe29d1db295097a438", - "parent_gene": "", - "protein_md5": "c5ecccb07fa1d41bf21a63f418aa50e5", - "protein_translation": "MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVVVYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK", - "protein_translation_length": 277, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1146" - ], - [ - "gene_synonym", - "icdC" - ], - [ - "gene_synonym", - "JW5173" - ], - [ - "gene_synonym", - "ASAP:ABE-0285040" - ], - [ - "gene_synonym", - "icd" - ], - [ - "gene_synonym", - "EcoGene:EG10009" - ], - [ - "gene_synonym", - "GeneID:4056026" - ], - [ - "gene_synonym", - "b4519" - ] - ], - "dna_sequence": "ATGCTGCGCCATATGGGTTGGACTGAAGCGGCTGACCTGATTGTTAAAGGTATGGAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAA", - "dna_sequence_length": 165, - "id": "CDS_1138", - "location": [ - [ - "NC_000913", - 1211413, - "+", - 165 - ] - ], - "md5": "142e277219d7b0f63372455bdee5a112", - "parent_gene": "", - "protein_md5": "08d54590a336783f54898f371cf28414", - "protein_translation": "MLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMEGAKLLKCSEFGEAIIENM", - "protein_translation_length": 54, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1147" - ], - [ - "gene_synonym", - "GeneID:945729" - ], - [ - "gene_synonym", - "elbA" - ], - [ - "gene_synonym", - "iraM" - ], - [ - "gene_synonym", - "NP_415678.1" - ], - [ - "gene_synonym", - "b1160" - ], - [ - "gene_synonym", - "ycgW" - ], - [ - "gene_synonym", - "EcoGene:EG13885" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75987" - ], - [ - "gene_synonym", - "elb1" - ], - [ - "gene_synonym", - "GI:16129123" - ], - [ - "gene_synonym", - "JW1147" - ], - [ - "gene_synonym", - "ASAP:ABE-0003893" - ] - ], - "dna_sequence": "ATGAAGTGGATAGTAATTGACACGGTAATTCAACCTACATGTGGTATATCTTTTTCAGCCATATGGGGTAATATGAAAATGATCATCTGGTATCAATCTACTATATTTCTCCCTCCTGGCAGTATATTTACACCGGTTAAGTCTGGTATTATCCTTAAGGATAAAGAATATCCTATTACTATTTATCACATCGCACCATTCAACAAGGATTTATGGAGTTTACTCAAAAGCAGTCAAGAGTGTCCTCCAGGAGAAAGCAAAATAACAAATAAATGTTTACATAATAGTTGCATTATAAAAATATGCCCATATGGGCTCAAGTAA", - "dna_sequence_length": 324, - "functions": [ - "RpoS stabilzer during Mg starvation, anti-RssB factor" - ], - "id": "CDS_1139", - "location": [ - [ - "NC_000913", - 1212003, - "-", - 324 - ] - ], - "md5": "18c10179fb6abab2ebaedf9611119b17", - "parent_gene": "", - "protein_md5": "c926b071be2bb64503954a817812997c", - "protein_translation": "MKWIVIDTVIQPTCGISFSAIWGNMKMIIWYQSTIFLPPGSIFTPVKSGIILKDKEYPITIYHIAPFNKDLWSLLKSSQECPPGESKITNKCLHNSCIIKICPYGLK", - "protein_translation_length": 107, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ycgX" - ], - [ - "gene_synonym", - "GeneID:945733" - ], - [ - "gene_synonym", - "ASAP:ABE-0003897" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75988" - ], - [ - "gene_synonym", - "b1161" - ], - [ - "gene_synonym", - "ECK1148" - ], - [ - "gene_synonym", - "GI:16129124" - ], - [ - "gene_synonym", - "JW1148" - ], - [ - "gene_synonym", - "EcoGene:EG14244" - ], - [ - "gene_synonym", - "NP_415679.1" - ] - ], - "dna_sequence": "ATGGATCAGGTCGTTGTTTTTCAAAAGATGTTTGAGCAAGTGAGAAAAGAGCAAAACTTCTCCTGGTTTTATTCAGAATTAAAACATCACCGTATTGCACATTACATTTATTATCTGGCTACGGATAACATCAGAATTATTACTCACGATGATACGGTTTTGTTATTAAGAGGAACCAGGAACCTGTTAAAAGTTAGTACGACCAAGAACCCTGCTAAAATAAAAGAGGCCGCATTGCTTCATATTTGCGGAAAATCTACATTTCGGGAATACTGTTCAACACTGGCAGGCGCGGGCGTTTTCCGGTGGGTTACTGATGTTAATCATAACAAACGCAGTTACTACGCCATTGATAATACGCTTTTATATATTGAAGATGTAGAAAATAATAAACCATTAATCTAG", - "dna_sequence_length": 405, - "functions": [ - "DUF1398 family protein" - ], - "id": "CDS_1140", - "location": [ - [ - "NC_000913", - 1213107, - "-", - 405 - ] - ], - "md5": "882d78f40232200c29a29c4dfdd5398d", - "parent_gene": "", - "protein_md5": "900cd4841f32617ff6290456e98f72a1", - "protein_translation": "MDQVVVFQKMFEQVRKEQNFSWFYSELKHHRIAHYIYYLATDNIRIITHDDTVLLLRGTRNLLKVSTTKNPAKIKEAALLHICGKSTFREYCSTLAGAGVFRWVTDVNHNKRSYYAIDNTLLYIEDVENNKPLI", - "protein_translation_length": 134, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945735" - ], - [ - "gene_synonym", - "b1162" - ], - [ - "gene_synonym", - "EcoGene:EG13886" - ], - [ - "gene_synonym", - "ECK1149" - ], - [ - "gene_synonym", - "GI:16129125" - ], - [ - "gene_synonym", - "NP_415680.1" - ], - [ - "gene_synonym", - "JW1149" - ], - [ - "gene_synonym", - "bluR" - ], - [ - "gene_synonym", - "ASAP:ABE-0003900" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75989" - ], - [ - "gene_synonym", - "ycgE" - ] - ], - "dna_sequence": "GTGGCTTATTACAGCATTGGTGATGTTGCTGAACGTTGCGGGATTAATCCTGTCACTCTCCGGGCCTGGCAACGCCGCTACGGTTTGTTAAAACCACAGCGCAGTGAAGGCGGACACCGACTCTTTGATGAAGAAGACATACAACGCATCGAAGAGATCAAGCGTTGGATAAGTAATGGCGTCCCTGTAGGCAAAGTTAAAGCATTACTGGAAACCACCAGCCAGGATACGGAAGATGACTGGAGCCGCCTGCAAGAAGAGATGATGTCAATTCTTCGCATGGCTAATCCTGCCAAACTACGCGCGAGAATTATTTCACTGGGTCGAGAGTACCCAGTAGATCAATTGATTAATCATGTTTACCTTCCTGTTCGCCAGCGTCTCGTGCTTGATCACAACACCTCCCGCATTATGAGCAGTATGTTTGACGGCGCATTAATTGAATACGCAGCAACCTCGCTTTTCGAAATGCGCCGTAAGCCCGGTAAAGAAGCCATTCTGATGGCGTGGAATGTTGAAGAGAGAGCACGATTGTGGCTGGAAGCATGGCGTTTATCATTGTCAGGATGGCACATTTCTGTTCTTGCTGATCCCATTGAATCGCCGCGCCCGGAACTGTTCCCGACGCAAACATTGATTGTCTGGACAGGCATGGCACCAACGAGAAGGCAAAACGAACTTTTACAACACTGGGGTGAGCAAGGTTATAAAGTCATCTTTCATGCCCCCTAA", - "dna_sequence_length": 732, - "functions": [ - "repressor of blue light-responsive genes" - ], - "id": "CDS_1141", - "location": [ - [ - "NC_000913", - 1214059, - "-", - 732 - ] - ], - "md5": "0a5a8fbc5d837610586ad55d159cfb14", - "parent_gene": "", - "protein_md5": "a2ad711b81e7a766683562b6b3d55c0d", - "protein_translation": "MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDEEDIQRIEEIKRWISNGVPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRARIISLGREYPVDQLINHVYLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRKPGKEAILMAWNVEERARLWLEAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGMAPTRRQNELLQHWGEQGYKVIFHAP", - "protein_translation_length": 243, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "bluF" - ], - [ - "gene_synonym", - "b1163" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75990" - ], - [ - "gene_synonym", - "EcoGene:EG13887" - ], - [ - "gene_synonym", - "GeneID:947592" - ], - [ - "gene_synonym", - "GI:16129126" - ], - [ - "gene_synonym", - "NP_415681.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003903" - ], - [ - "gene_synonym", - "ECK1150" - ], - [ - "gene_synonym", - "JW1150" - ], - [ - "gene_synonym", - "ycgF" - ] - ], - "dna_sequence": "ATGCTTACCACCCTTATTTATCGTAGCCATATACGTGACGACGAACCTGTCAAAAAAATCGAAGAAATGGTTTCGATAGCAAATCGCAGGAACATGCAGTCTGACGTAACAGGGATCTTACTGTTTAATGGTTCTCATTTTTTCCAGCTTCTGGAAGGTCCGGAAGAACAGGTTAAAATGATATATCGGGCTATATGCCAGGATCCACGGCACTATAATATTGTTGAGCTGCTGTGCGATTACGCGCCTGCTCGCCGTTTTGGCAAAGCGGGAATGGAATTATTTGATTTGCGCCTGCACGAGCGAGATGACGTTTTACAGGCCGTATTCGACAAAGGCACATCAAAATTTCAGCTAACTTATGATGACAGAGCGCTACAATTTTTTCGTACTTTTGTCCTTGCAACCGAACAATCAACCTATTTCGAGATCCCTGCCGAAGACTCCTGGCTTTTTATCGCTGACGGATCTGATAAAGAACTTGATTCCTGTGCCCTTTCACCAACTATAAACGACCACTTTGCCTTTCATCCTATTGTCGATCCCTTATCGCGGCGGATAATCGCTTTTGAAGCCATTGTGCAAAAAAATGAAGATAGCCCATCAGCCATAGCGGTTGGGCAGCGTAAAGACGGGGAAATCTACACAGCGGATCTCAAAAGTAAGGCGCTTGCATTCACGATGGCACACGCACTTGAGCTCGGTGATAAAATGATTTCAATCAATCTATTACCTATGACCCTGGTTAACGAACCTGACGCAGTCTCTTTTTTACTTAATGAAATAAAGGCCAATGCTCTGGTGCCTGAACAAATCATCGTTGAATTTACTGAAAGTGAAGTCATATCTCGGTTTGATGAGTTTGCCGAAGCGATTAAATCGCTAAAGGCTGCTGGTATCAGTGTAGCAATTGATCATTTTGGCGCAGGTTTTGCTGGTTTGTTACTCCTGTCACGCTTCCAGCCTGACAGAATTAAAATCAGTCAGGAATTGATTACCAATGTTCATAAAAGTGGGCCACGGCAGGCAATTATTCAGGCGATCATAAAATGCTGTACATCACTTGAAATTCAAGTCAGTGCTATGGGCGTGGCAACACCAGAAGAGTGGATGTGGCTTGAATCCGCAGGAATTGAGATGTTTCAGGGAGATCTGTTTGCTAAAGCTAAATTGAATGGTATCCCTTCCATAGCGTGGCCAGAGAAAAAATAA", 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[ - "gene_synonym", - "GeneID:945885" - ], - [ - "gene_synonym", - "ASAP:ABE-0003907" - ], - [ - "gene_synonym", - "b1164" - ], - [ - "gene_synonym", - "GI:16129127" - ], - [ - "gene_synonym", - "NP_415682.1" - ], - [ - "gene_synonym", - "EcoGene:EG14288" - ], - [ - "gene_synonym", - "ECK1151" - ], - [ - "gene_synonym", - "JW1151" - ] - ], - "dna_sequence": "ATGCATCAAAATTCAGTGACTTTAGATTCTGCGGGAGCAATCACTCGTTACTTTGCAAAAGCTAACTTGCATACTCAGCAGGAAACTCTCGGGGAAATTGTGACTGAGATTTTGAAAGATGGACGTAATCTGAGTCGAAAGTCGCTTTGTGCCAAACTTCTTTGCCGACTGGAACACGCGACTGGGGAAGAGGAACAGAAACATTATAATGCACTAATTGGGTTGCTTTTTGAATAA", - "dna_sequence_length": 237, - "functions": [ - "RcsB connector protein for regulation of biofilm and acid-resistance" - ], - "id": "CDS_1143", - "location": [ - [ - "NC_000913", - 1215789, - "+", - 237 - ] - ], - "md5": "9e9ec1ec5360fb7521b888fda284e690", - "parent_gene": "", - "protein_md5": "c513878fbcbc7e2671afafffb0e66fe7", - "protein_translation": 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"id": "CDS_1144", - "location": [ - [ - "NC_000913", - 1216068, - "+", - 273 - ] - ], - "md5": "0cb5c37f154051d2ef935dfde640695f", - "parent_gene": "", - "protein_md5": "72b355b5318c29ad381e1510a5a356e6", - "protein_translation": "MKTSDNERIKYEITGQAVLQILRMKINFSLQTLIKQLLVMKSAEEDAFRRDLIDSIIRDFSNSDSGGPNRRTATADNKSMFNGKKINRIH", - "protein_translation_length": 90, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75993" - ], - [ - "gene_synonym", - "EcoGene:EG14290" - ], - [ - "gene_synonym", - "b1166" - ], - [ - "gene_synonym", - "GeneID:945340" - ], - [ - "gene_synonym", - "NP_415684.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003911" - ], - [ - "gene_synonym", - "ariR" - ], - [ - "gene_synonym", - "ymgB" - ], - [ - "gene_synonym", - "ECK1153" - ], - [ - "gene_synonym", - "GI:16129129" - ], - [ - "gene_synonym", - "JW1153" - ] - ], - "dna_sequence": "ATGCTTGAAGATACTACAATTCATAATGCAATAACTGATAAAGCGTTAGCAAGTTACTTTCGCAGTTCGGGTAATTTGTTAGAAGAAGAATCAGCAGTGTTAGGGCAGGCTGTCACCAATTTAATGCTTTCAGGCGATAATGTTAATAATAAAAATATTATCTTAAGTCTGATACACTCCTTGGAAACAACAAGTGATATTCTCAAAGCTGATGTGATTAGAAAAACACTGGAAATCGTGTTGCGATACACAGCTGATGATATGTAA", - "dna_sequence_length": 267, - "functions": [ - "RcsB connector protein for regulation of biofilm and acid-resistance" - ], - "id": "CDS_1145", - "location": [ - [ - "NC_000913", - 1216369, - "+", - 267 - ] - ], - "md5": "622b848d4482836316f729e212f52806", - "parent_gene": "", - "protein_md5": "baa88cf91a836015b220168f5d77b9c1", - "protein_translation": "MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMLSGDNVNNKNIILSLIHSLETTSDILKADVIRKTLEIVLRYTADDM", - "protein_translation_length": 88, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14291" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75994" - ], - [ - "gene_synonym", - "NP_415685.1" - ], - [ - "gene_synonym", - "GI:16129130" - ], - [ - "gene_synonym", - "b1167" - ], - [ - "gene_synonym", - "GeneID:945090" - ], - [ - "gene_synonym", - "ASAP:ABE-0003915" - ], - [ - "gene_synonym", - "ymgC" - ], - [ - "gene_synonym", - "JW1154" - ], - [ - "gene_synonym", - "ECK1154" - ] - ], - "dna_sequence": "ATGAATAATTCAATCCCAGAGAGATTTATTTTTCAATGTGCTTTGTTTAAAAATCTCGAGAGGGAGGTGTTCATGACGCATGGGTATGTTGATAGTCATATTATTGATCAGGCTTTACGCTTGCGTTTAAAAGATGAAACCAGTGTGATTCTTTCTGATCTCTATCTGCAAATATTGCAGTACATTGAAATGCATAAGACTACACTAACGGATATCATTATTAATGACAGGGAATCCGTGCTCTCTTAG", - "dna_sequence_length": 249, - "functions": [ - "Blue light, low temperature and stress induced protein" - ], - "id": "CDS_1146", - "location": [ - [ - "NC_000913", - 1216748, - "+", - 249 - ] - ], - "md5": "c08ceb0be010ef158f79c01969578e48", - "parent_gene": "", - "protein_md5": "75e97843326a02ca74cc8c04528de6c0", - "protein_translation": "MNNSIPERFIFQCALFKNLEREVFMTHGYVDSHIIDQALRLRLKDETSVILSDLYLQILQYIEMHKTTLTDIIINDRESVLS", - "protein_translation_length": 82, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5174" - ], - [ - "gene_synonym", - "b1168" - ], - [ - "gene_synonym", - "NP_415686.2" - ], - [ - "gene_synonym", - "EcoGene:EG13888" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P75995" - ], - [ - "gene_synonym", - "GeneID:945738" - ], - [ - "gene_synonym", - "ycgG" - ], - [ - "gene_synonym", - "ECK1155" - ], - [ - "gene_synonym", - "GI:90111225" - ], - [ - "gene_synonym", - "ASAP:ABE-0003918" - ] - ], - "dna_sequence": 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"gene_synonym", - "b4520" - ], - [ - "gene_synonym", - "ASAP:ABE-0285041" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P58034" - ], - [ - "gene_synonym", - "EcoGene:EG14341" - ], - [ - "gene_synonym", - "GeneID:1450253" - ], - [ - "gene_synonym", - "JW1156" - ], - [ - "gene_synonym", - "GI:94541105" - ], - [ - "gene_synonym", - "ymgF" - ], - [ - "gene_synonym", - "ECK1156" - ] - ], - "dna_sequence": "ATGAACAATAGTAATAATCTGGATTATTTCACTCTCTATATCATATTTTCCATTGCATTTATGCTGATCACCCTCCTGGTCATCCTTATTGCAAAACCCAGTACCGGGCTGGGAGAAGTGCTTGTGACGATAAATTTGCTTAATGCCCTTGTTTGGCTGGCGATCAATCTGGTTAATCGATTAAGAGAAAGACTCGTCAACCACAGGGATCAGCAATAA", - "dna_sequence_length": 219, - "functions": [ - "inner membrane division septum protein" - ], - "id": "CDS_1148", - "location": [ - [ - "NC_000913", - 1218983, - "+", - 219 - ] - ], - "md5": "f0b37741d5d33a0f15113502acadae5b", - "parent_gene": "", - "protein_md5": "d0e0e21016eb1a8a16748a9261e74c9d", - "protein_translation": "MNNSNNLDYFTLYIIFSIAFMLITLLVILIAKPSTGLGEVLVTINLLNALVWLAINLVNRLRERLVNHRDQQ", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5176" - ], - [ - "gene_synonym", - "ASAP:ABE-0285092" - ], - [ - "gene_synonym", - "GeneID:2847703" - ], - [ - "gene_synonym", - "b4491" - ], - [ - "gene_synonym", - "JW5901" - ], - [ - "gene_synonym", - "ycgH" - ], - [ - "gene_synonym", - "ASAP:ABE-0003924" - ], - [ - "gene_synonym", - "EcoGene:EG13889" - ], - [ - "gene_synonym", - "ASAP:ABE-0003921" - ], - [ - "gene_synonym", - "ECK1157" - ] - ], - "dna_sequence": "ATGAAACTGAAAAAACTCCCCGGGTTTAGTTTGGGACTTATTGCTCTGGCGGTGGGTAATGCATATGCAACACAATTGTTGGATGATTATAGTATAATTTCCTATATGACTGATGAAGAATCGCCGATTGAAATCAAAGATAATAATCCGATAAGTAATGGAGAGTATCTAACCACTGAAGACGAAAGCCATGCTGTGAAAGTGGATGACGGTGTAACTGGATATATAAATAATGCCAGTGTGATGACTAGTGGTGATGGATCTTATGGTATTTCTGTTGATAGTCAAAACAAAGTATTATATATAAGCGATAGCGATATTAAGACCTCTGGAAGCGTATCTGACAAAGAAAATGGAGGGATAACAGCCAGCGCAGTAGTCAGTGAATTTGGTGGCACCATCTTTATGAATGGTGATAATTCAGTCGAGTCGGGTGGGGCATATTCAGCGGGACTTTTAAGCCAGGTTAATGATTCTGAAAAGATGGTAAATAACACCCGTCTTGAAACCACAGATAAAACGAACATTGTTACCTCTGGGGAAAATGCAGTAGGTGTTCTTGCATGTTCAAGTCCTGGAGAGTCTCGAACATGTGTCGATGCTGTAGATGATGAAGTTAGTGATTCTAACAGTTACGAAGTTATTAGCCGTGCTGATTTAAAAATGAATGGTGGTTCCATAACAACTAATGGCATTAATAGCTATGGTGCTTATGCTAATGGGAAAAAAGCATATATTAATTTAGATTATGTGGCACTTGAAACTGTGGCTGATGGAAGTTATGCAGTTGCTATTCGACAAGGTAACATTGATATAAAAAATAGTTCTATTACAACAACAGGCACTAAAGCCCCCATTGCAAAAATATACAATGGTGGAGAGTTATTTTTTTCCAATGTCACCGCGGTATCAAAACAAGATAAAGGAATATCAATTGATGCATCAAATATCGATTCTCAAGCCAAAATAGCACTATTAAGTGTTGAACTTTCAAGTGCTTTGGATAGTATTGATGTTAACAAAACTACAACGGATGTAAGTATCCTTAATCGAAGTATTATCACACCTGGTAATAATGTTCTGGTTAATAATACTGGAGGTGACTTAAACATAATTTCGTCCGACTCTATTCTAAATGGAGCGACTAAACTCGTCAGCGGCACAACCACGCTGAAGCTTTCAGAAAATACAATCTGGAATATGAAAGATGACTCCGTTGTTACCCATCTGACTAATTCAGACAGTATTATCAATCTTTCGTATGATGATGGTCAAACATTTACCCAAGGAAAAACATTAACCGTAAAAGGTAATTATGTCGGTAATAATGGTCAGCTTAATATCCGCACCGTATTAGGTGATGATAAATCGGCTACGGACAGACTTATTGTTGAGGGTAATACTTCGGGTTCAACTACCGTCTATGTGAAAAATGCTGGAGGAAGCGGCGCGGCCACGCTAAACGGGATCGAACTCATAACTGTGAATGGCGATGAATCTCCAGCAGATGCCTTCAGATAAGGTGATGCAAGGATTGCAGCTGGAGCTTTCGAATATCAACTAAAACAACAAGGCAAAAACTGGTATTTGACAAGTTATCAGTCAGTGAATGAGGAGGATAACAGCTCAGAGGGAAATTCAGAATCAACAGAAACGCCTACCCCCGTCCTGCGCCCCGAAGCTGGAAGTTACGTCGCTAACCTGGCAGCTGCTAACACTCTTTTTGTTATGCGTCTGAACGACCGTGCGGGTGAAACGCGCTACATCGATCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAACGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTTAGGGGGCGATCTGTTAACCGGTGGTTTTACCGATAGTGACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTCGGATTATCGTTCGAAAGGGAGTGTCAGAGGCTATAGCGCAGGGCTGTATGCCACCTGGTTTGCCGATGACATCAGTAAAAAAGGCGCATACATTGACTCCTGGGCGCAATATAGCTGGTTTAAAAACTCGGTGAAAGGGGATGAATTAGCCTATGAATCCTATAGCGCGAAAGGTGCAACCGTCTCGCTGGAAGCGGGTTACGGTTTTGCCCTGAATAAATCCTTTGGTCTGGAAGCGGCGAAATATACGTGGATCTTCCAGCCACAGGCACAGGCTATCTGGATGGGCGTCGATCATAATGCGCACACGGAAGCCAATGGCTCACGTATTGAGAATGACGCAAATAACAACATCCAGACCCGACTCGGCTTCCGCACCTTTATTCGTACTCAGGAGAAAAACAGCGGTCCGCACGGTGACGACTTTGAACCTTTTGTTGAAATGAACTGGATCCATAACAGTAAAGATTTTGCTGTCTCAATGAACGGTGTGAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCTGA", 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"gene_synonym", - "NP_415689.2" - ], - [ - "gene_synonym", - "ECK1158" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB46" - ], - [ - "gene_synonym", - "EcoGene:EG14292" - ], - [ - "gene_synonym", - "b1171" - ], - [ - "gene_synonym", - "ASAP:ABE-0003926" - ], - [ - "gene_synonym", - "GI:90111226" - ], - [ - "gene_synonym", - "ymgD" - ] - ], - "dna_sequence": "ATGAAAAAATTTGCTTTACTGGCGGGCCTGTTTGTTTTCGCACCAATGACCTGGGCGCAGGACTACAATATTAAAAACGGTTTGCCGTCAGAAACCTATATTACTTGCGCAGAAGCCAACGAAATGGCAAAAACTGACAGCGCACAGGTTGCAGAAATTGTTGCGGTAATGGGTAATGCCAGCGTTGCCAGCCGTGATTTAAAAATTGAGCAATCTCCGGAACTGAGCGCCAAAGTGGTAGAAAAACTGAATCAGGTTTGCGCTAAAGACCCGCAAATGCTGTTGATCACGGCAATTGATGACACCATGCGTGCTATCGGCAAAAAATAA", - "dna_sequence_length": 330, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1150", - "location": [ - [ - "NC_000913", - 1222634, - "-", - 330 - ] - ], - "md5": "ec78c156685eb31110c6676038bc96c6", - "parent_gene": "", - "protein_md5": "8b08c833e3518549015b4b6fa73d2b24", - "protein_translation": "MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAIDDTMRAIGKK", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:288551664" - ], - [ - "gene_synonym", - "EcoGene:EG14415" - ], - [ - "gene_synonym", - "ECK4470" - ], - [ - "gene_synonym", - "GeneID:945728" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q7DFV3" - ], - [ - "gene_synonym", - "ASAP:ABE-0003928" - ], - [ - "gene_synonym", - "b1172" - ], - [ - "gene_synonym", - "ymgG" - ], - [ - "gene_synonym", - "NP_415690.5" - ] - ], - "dna_sequence": "TTGAAGAAAAAAATACTTGCCTTCGGGCTTATCTCAGCATTGTTCTGCTCCACGCCAGCGATGGCGGATATGAACCGCACCACGAAAGGTGCATTGCTAGGCGCAGGCGTTGGTTTACTTACTGGCAATGGTGTTAATGGCGTACTGAAAGGTGCAGCTGTTGGCGCTGGTGTTGGTGCAGTAACAGAAAAAGGCCGCGACGGTAAAAATGCGCGTAAAGGTGCAAAAGTGGGTGCCGCCGTTGGTGCTGTCACTGGCGTTCTGACCGGCAATGGCCTCGAAGGGGCGATTAAAGGTGCCGTGATTGGCGGTACGGGTGGTGCAATTCTGGGTAAAATGAAATAA", - 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"ATGAGTTATTCCTCATTTAAGATTATTCTCATTCACGTAAAAAACATAATTCCTATCATCACAGCCACGCTCATTTTGAATTATCTGAATAATAGCGAGCGTTCTTTAGTTAAGCAGATCTTAATTGAAGACGAAATTATTGTGTGTGCAACTTACTTAATACCGGACATCTAA", - "dna_sequence_length": 174, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1152", - "location": [ - [ - "NC_000913", - 1223163, - "-", - 174 - ] - ], - "md5": "886731616026e91b46eda16ee7f35ba5", - "parent_gene": "", - "protein_md5": "12dd2edc296cfeb8f6989d3ea4e72b36", - "protein_translation": "MSYSSFKIILIHVKNIIPIITATLILNYLNNSERSLVKQILIEDEIIVCATYLIPDI", - "protein_translation_length": 57, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4594" - ], - [ - "gene_synonym", - "YP_001165315.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:A5A612" - ], - [ - "gene_synonym", - "EcoGene:EG14450" - ], - [ - "gene_synonym", - "ymgJ" - ], - [ - "gene_synonym", - "ECK4404" - ], - [ - "gene_synonym", - "GeneID:5061516" - ], - [ - "gene_synonym", - "GI:145698244" - ] - ], - 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"ECK1161" - ], - [ - "gene_synonym", - "ASAP:ABE-0003933" - ], - [ - "gene_synonym", - "b4521" - ] - ], - "dna_sequence": "TATCATTTATCCAATGGCATGGAATCGAAATCAGTCGATACCCGCAGTATATATCGTGAACTGGGTGCAACGCTGAGTTACAACATGCGCCTGGGGAACGGTATGGAAAATGAACCCTGGCTGAAGGCGGCTGTGCGCAAAGAATTTGTCGATGATAACCGGGTGAAGGTGAATAATGACGGTAATTTCGTCAATGATTTGTCGGGCAGACGTGGAATATACCAGGCAGCTATTAAAGCCTCATTCAGCAGTACGTTTAGCGGACATCTCGGGGTGGGGTATAGCCATGGTGCCGGTGTGGAATCCCCGTGGAACGCGGTGGCTGGTGTGAACTGGTCGTTCTGA", - "dna_sequence_length": 345, - "id": "CDS_1154", - "location": [ - [ - "NC_000913", - 1223564, - "+", - 108 - ], - [ - "NC_000913", - 1223671, - "+", - 237 - ] - ], - "md5": "62fdbd21a830ad3edc805cd34ef28e8d", - "parent_gene": "", - "protein_md5": "8e47d9b6868221fd8bb6d2bb8c3816ea", - "protein_translation": "YHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMENEPWLKAAVRKEFVDDNRVKVNNDGNFVNDLSGRRGIYQAAIKASFSSTFSGHLGVGYSHGAGVESPWNAVAGVNWSF", - "protein_translation_length": 114, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1163" - ], - [ - "gene_synonym", - "NP_415692.1" - ], - [ - "gene_synonym", - "minB" - ], - [ - "gene_synonym", - "minE" - ], - [ - "gene_synonym", - "GI:16129137" - ], - [ - "gene_synonym", - "b1174" - ], - [ - "gene_synonym", - "EcoGene:EG10598" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A734" - ], - [ - "gene_synonym", - "ASAP:ABE-0003935" - ], - [ - "gene_synonym", - "GeneID:945740" - ], - [ - "gene_synonym", - "ECK1162" - ] - ], - "dna_sequence": "ATGGCATTACTCGATTTCTTTCTCTCGCGGAAGAAAAACACAGCCAACATTGCAAAAGAACGGCTGCAGATTATTGTTGCTGAACGCCGTCGCAGCGATGCAGAACCGCATTATCTGCCGCAGTTGCGTAAAGATATTCTTGAGGTCATTTGTAAATACGTACAAATTGATCCTGAGATGGTAACCGTACAGCTTGAGCAAAAAGATGGCGATATTTCTATTCTTGAGCTGAACGTGACCTTACCGGAAGCAGAAGAGCTGAAATAA", - "dna_sequence_length": 267, - "functions": [ - "cell division topological specificity factor" - ], - "id": "CDS_1155", - "location": [ - [ - "NC_000913", - 1224545, - "-", - 267 - ] - ], - "md5": "9994dbc0a469bc84d0ba80f26afb4c92", - "parent_gene": "", - 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- "parent_gene": "", - "protein_md5": "00362c4b422b83dc24b4840c36ce5767", - "protein_translation": "MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLKHAPVVLNVSALEDPVNWSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGKEKAPRPAPTPQAPAQNTTPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIADGNIHVYGMMRGRALAGASGDRETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARLQLVENALTVQPLN", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1166" - ], - [ - "gene_synonym", - "NP_415695.1" - ], - [ - "gene_synonym", - "EcoGene:EG13891" - ], - [ - "gene_synonym", - "b1177" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76001" - ], - [ - "gene_synonym", - "ASAP:ABE-0003946" - ], - [ - "gene_synonym", - "GI:16129140" - ], - [ - "gene_synonym", - "GeneID:946155" - ], - [ - "gene_synonym", - "ycgJ" - ], - [ - "gene_synonym", - "ECK1165" - ] - ], - "dna_sequence": "ATGAATATGATGCGTATTTTTTATATCGGATTGTCAGGTGTGGGGATGATGTTCTCATCAATGGCGTCTGGAAATGACGCTGGCGGACTTCAATCTCCGGCGTGCGGCGTTGTTTGCGACCCGTATATTTGTGTGAACTCAGATGGCATTTCCCCAGAGTTAACAAGGAAATATCTCGGCGAAAAAGCCGCTGAAAACTTACAATCATTACAAGGCTACGATCCCAGCGAATTTACATTCGCTAACGGTGTATTTTGCGATGTTAAAGAAAAATTATGTCGTGATGATCGTTATTTTGGTGTGGATGGTAAGCGGAGTGGAAAAATCAATCAAACCACCACAAAGATGTTATTTATGTGTCGTGAGTGA", - "dna_sequence_length": 369, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1158", - "location": [ - [ - "NC_000913", - 1226600, - "+", - 369 - ] - ], - "md5": "cd9f13b502dbd4ca22718e009def6706", - "parent_gene": "", - "protein_md5": "cc45c1a3a8952b8417341d5084001975", - "protein_translation": "MNMMRIFYIGLSGVGMMFSSMASGNDAGGLQSPACGVVCDPYICVNSDGISPELTRKYLGEKAAENLQSLQGYDPSEFTFANGVFCDVKEKLCRDDRYFGVDGKRSGKINQTTTKMLFMCRE", - "protein_translation_length": 122, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1167" - ], - [ - "gene_synonym", - "ASAP:ABE-0003948" - ], - [ - "gene_synonym", - "EcoGene:EG13892" - ], - [ - "gene_synonym", - "GeneID:946963" - ], - [ - "gene_synonym", - "GI:16129141" - ], - [ - "gene_synonym", - "ycgK" - ], - [ - "gene_synonym", - "pliG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76002" - ], - [ - "gene_synonym", - "NP_415696.1" - ], - [ - "gene_synonym", - "ECK1166" - ], - [ - "gene_synonym", - "b1178" - ] - ], - "dna_sequence": "ATGAAAATCAAGAGCATCAGGAAGGCTGTATTGCTGCTTGCACTGCTAACCTCCACGAGCTTTGCTGCGGGTAAGAATGTCAATGTTGAGTTCAGAAAAGGCCATAGCAGCGCTCAGTACTCCGGCGAAATAAAGGGATACGATTACGATACATATACCTTCTATGCCAAAAAAGGTCAGAAAGTGCATGTGAGTATCTCTAATGAAGGCGCTGATACTTACCTCTTCGGGCCAGGAATCGATGATTCAGTTGATTTATCCAGATATTCCCCAGAACTCGATAGTCACGGACAATACTCACTCCCTGCTTCTGGCAAATATGAGCTGCGAGTGTTGCAAACCCGAAACGACGCCCGTAAAAACAAAACTAAAAAATATAACGTCGATATTCAAATTAAGTAA", - "dna_sequence_length": 402, - "functions": [ - "periplasmic inhibitor of g-type lysozyme" - ], - "id": "CDS_1159", - "location": [ - [ - "NC_000913", - 1227472, - "-", - 402 - ] - ], - "md5": "e48d8194361ee5570067b2e92a40398b", - "parent_gene": "", - "protein_md5": "12d5e3d642271de381a19ec3bb6812eb", - "protein_translation": "MKIKSIRKAVLLLALLTSTSFAAGKNVNVEFRKGHSSAQYSGEIKGYDYDTYTFYAKKGQKVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKYELRVLQTRNDARKNKTKKYNVDIQIK", - "protein_translation_length": 133, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003954" - ], - [ - "gene_synonym", - "GI:308209620" - ], - [ - "gene_synonym", - "EcoGene:EG13893" - ], - [ - "gene_synonym", - "GeneID:946226" - ], - [ - "gene_synonym", - "JW1168" - ], - [ - "gene_synonym", - "NP_415697.4" - ], - [ - "gene_synonym", - "ycgL" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB43" - ], - [ - "gene_synonym", - "ECK1167" - ], - [ - "gene_synonym", - "b1179" - ] - ], - "dna_sequence": "ATGTTTTGTGTGATTTATCGAAGCAGCAAGCGTGACCAGACCTATTTATATGTCGAAAAAAAAGACGATTTTTCGCGTGTTCCTGAGGAACTGATGAAAGGTTTTGGTCAGCCTCAGTTAGCGATGATTCTGCCGCTGGATGGGCGGAAGAAACTGGTCAATGCCGATATTGAAAAGGTTAAACAGGCATTAACCGAGCAAGGTTACTATTTGCAGTTACCGCCACCACCCGAAGATTTGCTGAAGCAACATCTTTCCGTCATGGGGCAGAAAACAGACGACACTAACAAATAA", - "dna_sequence_length": 294, - "functions": [ - "UPF0745 family protein" - ], - "id": "CDS_1160", - "location": [ - [ - "NC_000913", - 1227714, - "+", - 294 - ] - ], - "md5": "8143fc3aba9542a3ea6e71715d0cc1f8", - "parent_gene": "", - "protein_md5": "dbd96ae06c20d176e465415f8123eb06", - "protein_translation": "MFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMILPLDGRKKLVNADIEKVKQALTEQGYYLQLPPPPEDLLKQHLSVMGQKTDDTNK", - "protein_translation_length": 97, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76004" - ], - [ - "gene_synonym", - "ASAP:ABE-0003957" - ], - [ - "gene_synonym", - "GI:16129143" - ], - [ - "gene_synonym", - "JW1169" - ], - [ - "gene_synonym", - "GeneID:946115" - ], - [ - "gene_synonym", - "NP_415698.1" - ], - [ - "gene_synonym", - "ECK1168" - ], - [ - "gene_synonym", - "EcoGene:EG13894" - ], - [ - "gene_synonym", - "b1180" - ], - [ - "gene_synonym", - "ycgM" - ] - ], - "dna_sequence": "ATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGTTGGCAGTAACTATGCCAAACATATTAAAGAGATGGGCAGCGCAGTGCCCGAAGAGCCAGTGCTGTTTATTAAACCAGAAACGGCACTGTGCGATCTGCGGCAGCCATTGGCGATCCCATCCGATTTCGGTTCAGTTCATCATGAAGTCGAACTGGCGGTGTTGATTGGCGCGACACTGCGTCAGGCTACGGAAGAGCATGTCCGCAAAGCCATTGCCGGTTATGGCGTGGCGCTCGATCTGACATTGCGTGATGTTCAGGGAAAAATGAAGAAAGCCGGGCAGCCGTGGGAAAAGGCTAAAGCGTTTGATAACTCTTGTCCGCTTTCCGGGTTTATTCCCGCGGCGGAATTTACCGGCGACCCGCAAAATACAACGCTGAGCCTGAGCGTAAACGGCGAACAACGCCAGCAAGGTACGACTGCGGACATGATCCATAAAATCGTTCCGCTGATCGCTTATATGAGCAAGTTTTTTACCCTCAAGGCCGGTGACGTTGTGTTGACAGGCACGCCTGATGGCGTCGGCCCGTTGCAAAGCGGTGATGAGCTGACAGTCACTTTCGATGGGCATTCTTTGACAACTCGCGTTTTGTAA", - "dna_sequence_length": 660, - "functions": [ - "putative isomerase/hydrolase" - ], - 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"ATGGCGGAACACCTGATGAGCGATGTACCTTTCTGGCAAAGTAAAACCCTGGACGAAATGAGCGATGCGGAATGGGAGTCGTTGTGTGATGGTTGCGGTCAGTGTTGCCTGCATAAACTGATGGATGAAGACACCGACGAAATCTACTTCACTAACGTCGCCTGTCGCCAGCTCAATATTAAAACCTGTCAATGTCGGAACTACGAACGTCGTTTCGAGTTTGAACCCGACTGCATTAAATTAACCCGTGAAAATCTGCCAACATTCGAATGGCTGCCAATGACCTGCGCTTATCGTTTGCTGGCGGAAGGTAAAGATTTACCTGCGTGGCATCCGCTACTTACTGGTTCGAAAGCGGCAATGCATGGTGAACGTATCTCTGTGCGTCATATCGCAGTGAAAGAATCAGAAGTGATTGACTGGCAGGATCATATCTTAAATAAACCTGACTGGGCGCAGTGA", - "dna_sequence_length": 462, - "functions": [ - "UPF0153 family cysteine cluster protein" - ], - "id": "CDS_1162", - "location": [ - [ - "NC_000913", - 1228815, - "+", - 462 - ] - ], - "md5": "7571ea25cea3d807d2a214bd6a61a57b", - "parent_gene": "", - "protein_md5": "d73848551f0d39113c9ab657dde8811a", - "protein_translation": "MAEHLMSDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDEDTDEIYFTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLAEGKDLPAWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ", - "protein_translation_length": 153, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13243" - ], - [ - "gene_synonym", - "GeneID:945745" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77335" - ], - [ - "gene_synonym", - "clyA" - ], - [ - "gene_synonym", - "hpr" - ], - [ - "gene_synonym", - "sheA" - ], - [ - "gene_synonym", - "JW5181" - ], - [ - "gene_synonym", - "hlyE" - ], - [ - "gene_synonym", - "NP_415700.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0003962" - ], - [ - "gene_synonym", - "b1182" - ], - [ - "gene_synonym", - "ycgD" - ], - [ - "gene_synonym", - "GI:162135899" - ], - [ - "gene_synonym", - "ECK1170" - ] - ], - "dna_sequence": "ATGACTGAAATCGTTGCAGATAAAACGGTAGAAGTAGTTAAAAACGCAATCGAAACCGCAGATGGAGCATTAGATCTTTATAATAAATATCTCGATCAGGTCATCCCCTGGCAGACCTTTGATGAAACCATAAAAGAGTTAAGTCGCTTTAAACAGGAGTATTCACAGGCAGCCTCCGTTTTAGTCGGCGATATTAAAACCTTACTTATGGATAGCCAGGATAAGTATTTTGAAGCAACCCAAACAGTGTATGAATGGTGTGGTGTTGCGACGCAATTGCTCGCAGCGTATATTTTGCTATTTGATGAGTACAATGAGAAGAAAGCATCCGCCCAGAAAGACATTCTCATTAAGGTACTGGATGACGGCATCACGAAGCTGAATGAAGCGCAAAAATCCCTGCTGGTAAGCTCACAAAGTTTCAACAACGCTTCCGGGAAACTGCTGGCGTTAGATAGCCAGTTAACCAATGATTTTTCAGAAAAAAGCAGCTATTTCCAGTCACAGGTAGATAAAATCAGGAAGGAAGCATATGCCGGTGCCGCAGCCGGTGTCGTCGCCGGTCCATTTGGATTAATCATTTCCTATTCTATTGCTGCGGGCGTAGTTGAAGGAAAACTGATTCCAGAATTGAAGAACAAGTTAAAATCTGTGCAGAATTTCTTTACCACCCTGTCTAACACGGTTAAACAAGCGAATAAAGATATCGATGCCGCCAAATTGAAATTAACCACCGAAATAGCCGCCATCGGTGAGATAAAAACGGAAACTGAAACAACCAGATTCTACGTTGATTATGATGATTTAATGCTTTCTTTGCTAAAAGAAGCGGCCAAAAAAATGATTAACACCTGTAATGAGTATCAGAAAAGACACGGTAAAAAGACACTCTTTGAGGTACCTGAAGTCTGA", - "dna_sequence_length": 912, - "functions": [ - "hemolysin E" - ], - "id": "CDS_1163", - "location": [ - [ - "NC_000913", - 1230394, - "-", - 912 - ] - ], - "md5": "0866457872021f727e30d2d82147486f", - "parent_gene": "", - "protein_md5": "4323aef8aaf07a46c6b111e4c4c6c708", - "protein_translation": "MTEIVADKTVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETIKELSRFKQEYSQAASVLVGDIKTLLMDSQDKYFEATQTVYEWCGVATQLLAAYILLFDEYNEKKASAQKDILIKVLDDGITKLNEAQKSLLVSSQSFNNASGKLLALDSQLTNDFSEKSSYFQSQVDKIRKEAYAGAAAGVVAGPFGLIISYSIAAGVVEGKLIPELKNKLKSVQNFFTTLSNTVKQANKDIDAAKLKLTTEIAAIGEIKTETETTRFYVDYDDLMLSLLKEAAKKMINTCNEYQKRHGKKTLFEVPEV", - "protein_translation_length": 303, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945746" - ], - [ - "gene_synonym", - "EcoGene:EG11057" - ], - [ - "gene_synonym", - "umuD" - ], - [ - "gene_synonym", - "NP_415701.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0003974" - ], - [ - "gene_synonym", - "GI:16129146" - ], - [ - "gene_synonym", - "b1183" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG11" - ], - [ - "gene_synonym", - "JW1172" - ], - [ - "gene_synonym", - "ECK1171" - ] - ], - "dna_sequence": "ATGTTGTTTATCAAGCCTGCGGATCTCCGCGAAATTGTGACTTTTCCGCTATTTAGCGATCTTGTTCAGTGTGGCTTTCCTTCACCGGCAGCAGATTACGTTGAACAGCGCATCGATCTGAATCAACTGTTGATCCAGCATCCCAGCGCGACTTACTTCGTCAAAGCAAGTGGTGATTCTATGATTGATGGTGGAATTAGTGACGGTGATTTACTGATTGTCGATAGCGCTATTACCGCCAGCCATGGTGATATTGTCATCGCTGCTGTTGACGGCGAGTTTACGGTGAAAAAATTGCAACTACGCCCGACGGTACAGCTTATTCCCATGAACAGCGCGTACTCGCCCATTACCATCAGTAGTGAAGATACGCTGGATGTCTTTGGTGTGGTGATCCACGTCGTTAAGGCGATGCGCTGA", - "dna_sequence_length": 420, - "functions": [ - "translesion error-prone DNA polymerase V subunit", - "RecA-activated auto-protease" - ], - "id": "CDS_1164", - "location": [ - [ - "NC_000913", - 1230767, - "+", - 420 - ] - ], - "md5": "6ab3dd92c1f18be1c7f6d911d0627628", - "parent_gene": "", - "protein_md5": "bbb3d5be73690fd3d4a5747d85eea991", - "protein_translation": "MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR", - "protein_translation_length": 139, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415702.1" - ], - [ - "gene_synonym", - "GI:16129147" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04152" - ], - [ - "gene_synonym", - "umuC" - ], - [ - "gene_synonym", - "ECK1172" - ], - [ - "gene_synonym", - "uvm" - ], - [ - "gene_synonym", - "ASAP:ABE-0003977" - ], - [ - "gene_synonym", - "EcoGene:EG11056" - ], - [ - "gene_synonym", - "JW1173" - ], - [ - "gene_synonym", - "b1184" - ], - [ - "gene_synonym", - "GeneID:946359" - ] - ], - "dna_sequence": "ATGTTTGCCCTCTGTGATGTAAACGCGTTTTATGCCAGCTGTGAGACGGTGTTTCGCCCTGATTTATGGGGTAAACCGGTGGTTGTGCTATCGAATAATGACGGTTGCGTTATCGCCCGAAACGCTGAGGCAAAGGCGCTTGGCGTTAAAATGGGCGATCCCTGGTTCAAACAAAAAGATCTGTTTCGTCGCTGTGGCGTGGTTTGCTTTAGCAGCAATTATGAGCTTTACGCAGACATGAGCAATCGGGTGATGTCGACGCTGGAAGAGCTATCGCCCCGCGTCGAGATTTACAGTATTGATGAGGCATTCTGCGATCTGACAGGTGTGCGTAATTGTCGCGATCTGACTGATTTTGGCAGAGAAATTCGCGCAACGGTGCTACAACGTACCCATCTTACTGTTGGTGTGGGGATCGCCCAGACCAAAACGCTGGCTAAGCTTGCCAATCATGCGGCAAAAAAATGGCAGCGGCAGACGGGTGGGGTGGTGGATTTATCAAATCTGGAACGCCAGCGTAAATTAATGTCTGCTCTCCCCGTGGATGACGTCTGGGGGATTGGACGGCGGATCAGCAAAAAACTGGACGCGATGGGGATCAAAACCGTTCTCGATTTGGCGGATACAGATATCCGGTTTATCCGTAAACATTTTAATGTCGTGCTCGAAAGAACGGTGCGTGAACTGCGCGGCGAACCCTGTTTGCAACTGGAAGAGTTTGCACCGACGAAGCAGGAAATTATCTGTTCCCGCTCGTTTGGTGAACGCATCACGGATTATCCGTCGATGCGGCAGGCCATTTGTAGTTACGCTGCCCGGGCGGCGGAAAAACTTCGCAGCGAGCATCAATATTGTCGGTTTATCTCCACGTTTATTAAGACGTCACCATTTGCGCTCAATGAACCTTATTACGGCAATAGCGCGTCGGTAAAACTGCTGACGCCCACTCAGGACAGCAGGGATATCATTAACGCTGCTACGCGATCTCTGGATGCCATCTGGCAAGCGGGCCATCGTTACCAAAAAGCGGGCGTGATGCTGGGGGATTTCTTCAGTCAGGGAGTCGCGCAGCTCAATTTATTCGATGACAACGCACCGCGCCCCGGGAGTGAGCAATTGATGACGGTAATGGATACACTGAATGCTAAAGAGGGCAGAGGAACACTCTATTTTGCCGGGCAGGGGATCCAGCAACAATGGCAGATGAAGCGAGCCATGCTTTCACCACGTTATACAACGCGAAGTTCTGATTTACTGAGGGTCAAATAA", - "dna_sequence_length": 1269, - "functions": [ - "translesion error-prone DNA polymerase V subunit", - "DNA polymerase activity" - ], - "id": "CDS_1165", - "location": [ - [ - "NC_000913", - 1231186, - "+", - 1269 - ] - ], - "md5": "e41a887e5aad81672866067c76f4c5bb", - "parent_gene": "", - "protein_md5": "56056a66c50431c735fd00b444bdc0bb", - "protein_translation": "MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK", - "protein_translation_length": 422, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "dsbX" - ], - [ - "gene_synonym", - "NP_415703.3" - ], - [ - "gene_synonym", - "b1185" - ], - [ - "gene_synonym", - "GeneID:946344" - ], - [ - "gene_synonym", - "JW5182" - ], - [ - "gene_synonym", - "EcoGene:EG11393" - ], - [ - "gene_synonym", - "ASAP:ABE-0003979" - ], - [ - "gene_synonym", - "iarB" - ], - [ - "gene_synonym", - "GI:49176085" - ], - [ - "gene_synonym", - "ycgA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6M2" - ], - [ - "gene_synonym", - "dsbB" - ], - [ - "gene_synonym", - "ECK1173" - ], - [ - "gene_synonym", - "roxB" - ] - ], - "dna_sequence": "ATGTTGCGATTTTTGAACCAATGTTCACAAGGCCGGGGCGCGTGGCTGTTGATGGCGTTTACTGCTCTGGCACTGGAACTGACGGCGCTGTGGTTCCAGCATGTGATGTTACTGAAACCTTGCGTGCTCTGTATTTATGAACGCTGCGCGTTATTCGGCGTTCTGGGTGCTGCGCTGATTGGCGCGATCGCCCCGAAAACTCCGCTGCGTTATGTAGCGATGGTTATCTGGTTGTATAGTGCGTTCCGCGGTGTGCAGTTAACTTACGAGCACACCATGCTTCAGCTCTATCCTTCGCCGTTTGCCACCTGTGATTTTATGGTTCGTTTCCCGGAATGGCTGCCGCTGGATAAGTGGGTGCCGCAAGTGTTTGTCGCCTCTGGCGATTGCGCCGAGCGTCAGTGGGATTTTTTAGGTCTGGAAATGCCGCAGTGGCTGCTCGGTATTTTTATCGCTTACCTGATTGTCGCAGTGCTGGTGGTGATTTCCCAGCCGTTTAAAGCGAAAAAACGTGATCTGTTCGGTCGCTAA", - "dna_sequence_length": 531, - "functions": [ - "oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I" - ], - "id": "CDS_1166", - "location": [ - [ - "NC_000913", - 1233030, - "-", - 531 - ] - ], - "md5": "e242d8a1ed243dfd9819455d6cb3fe88", - "parent_gene": "", - "protein_md5": "71b318e3416255f0ca55231b2ea90530", - "protein_translation": "MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLCIYERCALFGVLGAALIGAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFATCDFMVRFPEWLPLDKWVPQVFVASGDCAERQWDFLGLEMPQWLLGIFIAYLIVAVLVVISQPFKAKKRDLFGR", - "protein_translation_length": 176, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944822" - ], - [ - "gene_synonym", - "GI:16129149" - ], - [ - "gene_synonym", - "EcoGene:EG11392" - ], - [ - "gene_synonym", - "NP_415704.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFA7" - ], - [ - "gene_synonym", - "nhaB" - ], - [ - "gene_synonym", - "ASAP:ABE-0003984" - ], - [ - "gene_synonym", - "ECK1174" - ], - [ - "gene_synonym", - "JW1175" - ], - [ - "gene_synonym", - "b1186" - ] - ], - "dna_sequence": "ATGGAGATCTCCTGGGGCCGCGCGCTATGGCGCAATTTTTTGGGCCAGTCCCCCGACTGGTACAAACTCGCCCTCATCATTTTCTTAATCGTAAACCCGTTAATTTTCCTCATCAGCCCTTTCGTCGCGGGCTGGTTGCTGGTAGCGGAATTTATTTTCACTCTGGCGATGGCCCTGAAATGCTACCCGCTGCTCCCCGGTGGTCTGTTGGCTATCGAAGCGGTATTCATCGGCATGACCAGCGCGGAACACGTCCGTGAAGAGGTGGCGGCAAATCTTGAAGTCTTGCTGTTACTGATGTTTATGGTGGCGGGTATCTATTTTATGAAACAGCTGTTGCTGTTCATATTTACCCGTTTGCTGTTAAGCATTCGCTCCAAAATGCTGCTGTCGCTCTCTTTTTGCGTGGCGGCTGCGTTCCTCTCCGCGTTCCTCGATGCCTTAACCGTCGTGGCGGTGGTGATCAGCGTTGCAGTCGGTTTTTATGGTATTTATCACCGCGTAGCCTCTTCCCGTACCGAAGACACCGACCTGCAAGACGATAGTCATATCGACAAGCATTACAAAGTGGTTCTGGAACAGTTCCGTGGCTTTCTGCGTAGCCTGATGATGCATGCCGGTGTCGGCACCGCATTAGGCGGCGTAATGACCATGGTGGGCGAACCACAGAACCTGATCATCGCTAAAGCGGCTGGCTGGCATTTTGGCGATTTCTTCCTGCGCATGTCGCCGGTGACCGTTCCGGTTCTGATTTGTGGCCTGTTAACCTGCCTGCTGGTAGAGAAGCTGCGTTGGTTTGGCTACGGTGAAACGCTGCCGGAGAAAGTCCGCGAAGTGTTGCAACAGTTTGACGATCAAAGCCGCCACCAGCGTACCCGTCAGGATAAAATCCGTCTGATTGTCCAGGCGATTATTGGCGTCTGGCTGGTGACTGCGCTGGCGTTGCATCTGGCGGAAGTTGGCTTGATTGGTTTGTCAGTCATTATTCTGGCAACATCATTGACCGGTGTCACCGATGAGCATGCTATCGGTAAAGCCTTCACCGAATCTCTGCCATTCACCGCACTGTTGACGGTGTTTTTCTCGGTAGTCGCGGTGATTATCGACCAACAACTGTTTTCGCCAATTATTCAGTTTGTGTTGCAGGCATCGGAACATGCTCAGCTGTCGCTGTTCTATATTTTCAACGGTCTGCTGTCATCCATTTCGGATAACGTCTTCGTGGGGACGATTTATATCAACGAAGCGAAAGCGGCAATGGAAAGTGGCGCTATCACGTTGAAGCAATACGAGCTGCTGGCGGTCGCCATTAATACCGGTACCAATCTGCCCTCCGTCGCTACGCCGAACGGTCAGGCTGCGTTCCTGTTCCTGCTGACCTCTGCACTCGCGCCATTGATTCGCCTCTCTTATGGCCGCATGGTGTGGATGGCCCTGCCTTACACCCTCGTCCTGACACTCGTCGGCTTGCTCTGCGTCGAGTTTACGCTTGCCCCTGTAACCGAATGGTTTATGCAAATGGGCTGGATAGCAACGCTTTGA", - "dna_sequence_length": 1542, - "functions": [ - "sodium:proton antiporter" - ], - "id": "CDS_1167", - "location": [ - [ - "NC_000913", - 1234717, - "-", - 1542 - ] - ], - "md5": "06fe7121d67b80a514603927d22b75a7", - "parent_gene": "", - "protein_md5": "e3552b4ea6d8fd8fd8efafa5032cb82a", - "protein_translation": "MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFLISPFVAGWLLVAEFIFTLAMALKCYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFMVAGIYFMKQLLLFIFTRLLLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVGFYGIYHRVASSRTEDTDLQDDSHIDKHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTMVGEPQNLIIAKAAGWHFGDFFLRMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKVREVLQQFDDQSRHQRTRQDKIRLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATSLTGVTDEHAIGKAFTESLPFTALLTVFFSVVAVIIDQQLFSPIIQFVLQASEHAQLSLFYIFNGLLSSISDNVFVGTIYINEAKAAMESGAITLKQYELLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGRMVWMALPYTLVLTLVGLLCVEFTLAPVTEWFMQMGWIATL", - "protein_translation_length": 513, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "fadR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8V6" - ], - [ - "gene_synonym", - "oleR" - ], - [ - "gene_synonym", - "ole" - ], - [ - "gene_synonym", - "GI:16129150" - ], - [ - "gene_synonym", - "thdB" - ], - [ - "gene_synonym", - "EcoGene:EG10281" - ], - [ - "gene_synonym", - "ASAP:ABE-0003988" - ], - [ - "gene_synonym", - "b1187" - ], - [ - "gene_synonym", - "GeneID:948652" - ], - [ - "gene_synonym", - "ECK1175" - ], - [ - "gene_synonym", - "dec" - ], - [ - "gene_synonym", - "JW1176" - ], - [ - "gene_synonym", - "NP_415705.1" - ] - ], - "dna_sequence": "ATGGTCATTAAGGCGCAAAGCCCGGCGGGTTTCGCGGAAGAGTACATTATTGAAAGTATCTGGAATAACCGCTTCCCTCCCGGGACTATTTTGCCCGCAGAACGTGAACTTTCAGAATTAATTGGCGTAACGCGTACTACGTTACGTGAAGTGTTACAGCGTCTGGCACGAGATGGCTGGTTGACCATTCAACATGGCAAGCCGACGAAGGTGAATAATTTCTGGGAAACTTCCGGTTTAAATATCCTTGAAACACTGGCGCGACTGGATCACGAAAGTGTGCCGCAGCTTATTGATAATTTGCTGTCGGTGCGTACCAATATTTCCACTATTTTTATTCGCACCGCGTTTCGTCAGCATCCCGATAAAGCGCAGGAAGTGCTGGCTACCGCTAATGAAGTGGCCGATCACGCCGATGCCTTTGCCGAGCTGGATTACAACATATTCCGCGGCCTGGCGTTTGCTTCCGGCAACCCGATTTACGGTCTGATTCTTAACGGGATGAAAGGGCTGTATACGCGTATTGGTCGTCACTATTTCGCCAATCCGGAAGCGCGCAGTCTGGCGCTGGGCTTCTACCACAAACTGTCGGCGTTGTGCAGTGAAGGCGCGCACGATCAGGTGTACGAAACAGTGCGTCGCTATGGGCATGAGAGTGGCGAGATTTGGCACCGGATGCAGAAAAATCTGCCGGGTGATTTAGCCATTCAGGGGCGATAA", - "dna_sequence_length": 720, - "functions": [ - "fatty acid metabolism regulon transcriptional regulator" - ], - "id": "CDS_1168", - "location": [ - [ - "NC_000913", - 1234938, - "+", - 720 - ] - ], - "md5": "f35ee20159f39a65e04ffedebbcc4d53", - "parent_gene": "", - "protein_md5": "48835af5c3e5c8f2b7aba321dfbe6aff", - "protein_translation": "MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHESGEIWHRMQKNLPGDLAIQGR", - "protein_translation_length": 239, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0003990" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P29013" - ], - [ - "gene_synonym", - "GI:16129151" - ], - [ - "gene_synonym", - "b1188" - ], - [ - "gene_synonym", - "GeneID:946365" - ], - [ - "gene_synonym", - "EcoGene:EG11516" - ], - [ - "gene_synonym", - "ECK1176" - ], - [ - "gene_synonym", - "NP_415706.1" - ], - [ - "gene_synonym", - "ycgB" - ], - [ - "gene_synonym", - "JW1177" - ] - ], - "dna_sequence": "ATGGCGACGATCGATTCTATGAATAAGGACACCACACGTTTGAGCGATGGACCCGACTGGACGTTCGACCTGCTGGATGTTTATCTGGCAGAGATAGACCGGGTGGCGAAACTCTACCGGCTGGATACCTACCCGCACCAGATTGAAGTGATAACCTCAGAACAGATGATGGATGCCTACTCCAGCGTCGGCATGCCAATTAACTATCCGCACTGGTCATTCGGTAAAAAGTTTATCGAGACTGAACGGCTGTATAAGCACGGTCAGCAAGGACTGGCCTATGAAATCGTCATTAACTCTAACCCGTGTATCGCTTACCTGATGGAAGAGAACACCATTACCATGCAAGCGCTGGTGATGGCTCATGCCTGCTATGGGCATAACTCTTTCTTCAAAAACAATTACTTATTCCGTAGCTGGACCGACGCCAGTTCGATTGTCGATTATCTGATTTTTGCCCGTAAATATATTACCGAGTGCGAAGAGCGTTATGGCGTTGATGAAGTAGAACGGCTTCTGGACTCGTGCCACGCGCTGATGAACTACGGCGTGGACCGGTACAAACGCCCGCAAAAAATCTCGCTGCAAGAAGAGAAAGCCCGGCAGAAAAGTCGCGAAGAGTATCTGCAAAGTCAGGTCAATATGCTCTGGCGTACCCTGCCGAAGCGCGAGGAAGAGAAAACGGTTGCTGAAGCGCGCCGCTATCCGTCCGAACCACAAGAAAACCTGCTCTATTTTATGGAGAAAAATGCGCCACTGCTGGAATCATGGCAGCGTGAAATCCTGCGTATTGTGCGTAAGGTGAGCCAGTATTTTTATCCGCAAAAACAGACTCAGGTGATGAACGAAGGCTGGGCGACCTTCTGGCACTACACCATCCTTAACCATCTGTATGATGAAGGGAAAGTAACGGAACGTTTTATGCTGGAGTTTTTGCACAGCCACACCAATGTGGTCTTCCAGCCCCCCTATAACAGCCCGTGGTACAGCGGCATCAACCCGTATGCCCTCGGGTTCGCCATGTTCCAGGATATTAAACGGATTTGTCAGTCGCCAACGGAAGAAGACAAATACTGGTTCCCGGATATCGCCGGTTCCGACTGGCTGGAAACGCTGCATTTCGCGATGCGTGATTTCAAAGATGAGAGTTTTATCAGCCAGTTCCTGTCACCGAAAGTGATGCGTGATTTCCGCTTCTTCACCGTGCTGGATGACGATCGGCATAATTATCTGGAGATTTCCGCTATTCATAATGAAGAAGGTTATCGGGAGATCCGTAACCGGTTATCGTCGCAATATAACTTAAGTAATCTGGAGCCGAATATTCAGATCTGGAACGTGGATTTGCGCGGCGACCGTTCGCTGACGCTGCGTTATATTCCACATAATCGCGCACCGCTGGATCGGGGGCGCAAAGAAGTCCTGAAGCATGTGCATCGCCTGTGGGGATTTGATGTGATGCTCGAACAGCAAAACGAAGACGGCAGCATCGAGTTGCTGGAACGTTGCCCGCCAAGAATGGGAAATCTGTAA", 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], - [ - "gene_synonym", - "NP_415707.1" - ], - [ - "gene_synonym", - "GeneID:945752" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6J5" - ], - [ - "gene_synonym", - "dadA" - ], - [ - "gene_synonym", - "GI:16129152" - ], - [ - "gene_synonym", - "b1189" - ], - [ - "gene_synonym", - "ECK1177" - ], - [ - "gene_synonym", - "ASAP:ABE-0003995" - ], - [ - "gene_synonym", - "dadR" - ] - ], - "dna_sequence": "ATGCGAGTTGTCATACTGGGAAGTGGTGTGGTAGGCGTTGCCAGCGCCTGGTACTTAAATCAGGCAGGACATGAGGTCACCGTCATTGATCGGGAGCCGGGGGCCGCCCTGGAAACCAGTGCCGCGAATGCCGGGCAAATCTCCCCCGGATATGCTGCACCGTGGGCGGCACCAGGTGTGCCTTTAAAAGCGATTAAATGGATGTTCCAGCGCCATGCGCCGCTGGCGGTTCGTCTCGACGGTACGCAGTTCCAGTTGAAATGGATGTGGCAAATGTTACGTAACTGCGACACCAGCCACTACATGGAAAACAAAGGGCGGATGGTGCGTCTGGCGGAATACAGCCGTGATTGCCTGAAAGCATTGCGCGCCGAAACCAATATTCAGTATGAAGGGCGTCAGGGTGGGACGCTGCAACTGTTCCGTACCGAACAACAGTATGAAAATGCGACCCGCGATATCGCCGTGCTGGAAGATGCCGGCGTACCGTATCAGCTGCTGGAATCCAGCCGCCTGGCGGAAGTGGAGCCCGCGCTGGCAGAAGTGGCGCACAAACTGACGGGCGGCCTGCAGTTACCCAATGATGAAACCGGAGACTGTCAGCTATTTACCCAGAATCTGGCGCGGATGGCGGAGCAGGCGGGGGTTAAATTCCGCTTTAATACGCCCGTTGACCAACTGCTTTGCGACGGCGAGCAAATCTACGGCGTGAAGTGTGGCGATGAAGTGATTAAGGCCGATGCGTATGTGATGGCGTTTGGTTCTTACTCGACGGCGATGCTCAAAGGCATTGTTGATATTCCGGTGTATCCGCTGAAAGGCTACTCGCTGACCATTCCAATTGCGCAGGAAGATGGTGCGCCGGTATCCACCATTCTTGATGAAACCTACAAAATCGCCATTACCCGTTTCGATAACCGCATTCGTGTTGGCGGAATGGCGGAGATTGTTGGTTTTAATACCGAGCTGTTGCAACCGCGTCGTGAAACGCTGGAGATGGTGGTTCGCGATCTCTATCCACGCGGCGGTCATGTCGAGCAGGCGACTTTCTGGACTGGTCTGCGCCCGATGACGCCAGACGGCACGCCGGTTGTCGGGCGTACACGCTTTAAAAATCTGTGGCTGAATACCGGTCACGGCACGCTCGGCTGGACGATGGCTTGCGGTTCCGGTCAGTTGTTAAGCGATCTGCTCTCTGGTCGCACGCCAGCGATCCCATATGAGGATCTAAGCGTAGCGCGCTACAGCCGTGGATTTACGCCATCACGTCCGGGCCATTTACATGGCGCACACAGCTAA", - "dna_sequence_length": 1299, - "functions": [ - "D-amino acid dehydrogenase" - ], - "id": "CDS_1170", - "location": [ - [ - "NC_000913", - 1237571, - "+", - 1299 - ] - ], - "md5": "b98f160738f6f983c02c02eca9455caa", - "parent_gene": "", - "protein_md5": "520656e2a724f46b72d4c4e377c0a1d1", - "protein_translation": "MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYMENKGRMVRLAEYSRDCLKALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDAGVPYQLLESSRLAEVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKFRFNTPVDQLLCDGEQIYGVKCGDEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPIAQEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMVVRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQLLSDLLSGRTPAIPYEDLSVARYSRGFTPSRPGHLHGAHS", - "protein_translation_length": 432, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129153" - ], - [ - "gene_synonym", - "NP_415708.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P29012" - ], - [ - "gene_synonym", - "GeneID:945754" - ], - [ - "gene_synonym", - "dadB" - ], - [ - "gene_synonym", - "JW1179" - ], - [ - "gene_synonym", - "msuA?" - ], - [ - "gene_synonym", - "dadX" - ], - [ - "gene_synonym", - "ECK1178" - ], - [ - "gene_synonym", - "ASAP:ABE-0003997" - ], - [ - "gene_synonym", - "b1190" - ], - [ - "gene_synonym", - "alnB" - ], - [ - "gene_synonym", - "EcoGene:EG11408" - ] - ], - "dna_sequence": "ATGACCCGTCCGATACAGGCCAGCCTCGATCTGCAGGCATTAAAACAGAATCTGTCCATTGTCCGCCAGGCCGCGACGCACGCGCGCGTCTGGTCGGTGGTAAAAGCGAACGCTTACGGGCATGGTATTGAGCGTATCTGGAGCGCGATCGGGGCCACCGATGGCTTTGCATTGCTTAACCTGGAAGAGGCAATAACGTTACGTGAGCGCGGCTGGAAAGGACCGATCCTGATGCTGGAAGGATTTTTCCATGCTCAGGATCTGGAGATTTATGACCAGCACCGCCTGACCACCTGCGTACACAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAAGCGGAACATCCTGATGGAATTTCCGGCGCGATGGCGCGTATTGAGCAGGCGGCGGAGGGGCTGGAGTGTCGGCGTTCGTTGTCCAATTCGGCGGCGACTCTGTGGCACCCGGAAGCGCATTTTGACTGGGTTCGGCCTGGCATTATTTTGTATGGCGCTTCGCCGTCCGGTCAGTGGCGTGATATCGCCAATACCGGATTACGTCCGGTGATGACGCTAAGCAGTGAGATTATTGGTGTCCAGACGCTAAAAGCGGGCGAGCGTGTGGGCTACGGCGGTCGCTATACTGCGCGCGATGAACAGCGAATCGGCATTGTCGCCGCAGGGTACGCCGACGGTTATCCGCGCCACGCGCCTACCGGTACCCCTGTTTTAGTGGACGGCGTGCGCACCATGACGGTGGGGACCGTCTCGATGGATATGCTAGCGGTCGATTTAACGCCTTGCCCGCAGGCGGGTATTGGTACGCCGGTTGAGCTGTGGGGCAAGGAGATCAAAATTGATGATGTCGCCGCCGCTGCCGGAACGGTGGGCTATGAGTTGATGTGCGCGCTGGCGCTACGCGTCCCGGTTGTGACGGTGTAA", - "dna_sequence_length": 1071, - "functions": [ - "alanine racemase, catabolic, PLP-binding" - ], - "id": "CDS_1171", - "location": [ - [ - "NC_000913", - 1238879, - "+", - 1071 - ] - ], - "md5": "99feb30dc1f6a85b07ff61557b6f249c", - "parent_gene": "", - "protein_md5": "60ada618773dd222501819dd61cddfc7", - "protein_translation": "MTRPIQASLDLQALKQNLSIVRQAATHARVWSVVKANAYGHGIERIWSAIGATDGFALLNLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLDIYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARIEQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLSSEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHAPTGTPVLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMCALALRVPVVTV", - "protein_translation_length": 356, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76007" - ], - [ - "gene_synonym", - "ECK1179" - ], - [ - "gene_synonym", - "cvrA" - ], - [ - "gene_synonym", - "JW5184" - ], - [ - "gene_synonym", - "NP_415709.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0003999" - ], - [ - "gene_synonym", - "EcoGene:EG13896" - ], - [ - "gene_synonym", - "GeneID:945755" - ], - [ - "gene_synonym", - "ycgO" - ], - [ - "gene_synonym", - "GI:90111230" - ], - [ - "gene_synonym", - "b1191" - ] - ], - "dna_sequence": "TTGGATGCCACAACAATAATTAGCCTTTTCATCTTAGGATCCATCCTTGTCACCAGCAGTATATTACTTAGTTCATTTTCTTCCCGTCTTGGCATTCCTATTCTGGTTATTTTTCTGGCGATCGGCATGCTGGCAGGAGTCGATGGCGTCGGCGGTATCCCGTTTGATAATTACCCCTTCGCCTACATGGTAAGTAACCTGGCACTGGCGATTATTTTGCTCGACGGCGGGATGCGCACTCAGGCCAGTTCCTTTCGTGTGGCGTTAGGACCGGCACTGTCGCTGGCGACGCTGGGCGTGCTTATCACCTCTGGTTTAACCGGCATGATGGCGGCGTGGCTGTTTAATCTTGATTTGATTGAAGGCTTATTAATCGGCGCTATCGTCGGCTCTACCGATGCTGCAGCGGTCTTTTCTCTGCTGGGTGGTAAGGGGCTTAACGAACGTGTTGGCTCGACGCTGGAAATTGAATCCGGCAGTAATGATCCAATGGCGGTCTTTCTGACGATTACCCTAATTGCGATGATCCAGCATCATGAGAGCAATATTAGCTGGATGTTCATTGTCGATATTCTGCAACAATTTGGTCTGGGCATTGTAATAGGTCTTGGCGGCGGTTATTTACTACTGCAAATGATCAACCGCATCGCCCTGCCCGCCGGATTATATCCATTGCTGGCATTAAGTGGCGGTATTCTGATTTTCTCATTAACTACTGCGCTGGAAGGTAGCGGTATTCTGGCGGTGTATCTGTGCGGTTTTCTGCTGGGTAATCGCCCTATTCGCAACCGCTACGGCATCCTGCAAAATTTCGACGGCCTCGCCTGGCTGGCGCAAATCGCCATGTTCCTGGTGCTGGGGCTGTTGGTTAACCCAAGCGATCTGCTGCCTATTGCCATTCCGGCGCTCATTTTGTCCGCATGGATGATATTCTTCGCCCGTCCCCTTTCGGTATTTGCTGGATTGCTCCCCTTCCGCGGTTTCAATCTGCGTGAGCGCGTGTTTATCAGCTGGGTAGGATTACGCGGCGCGGTGCCAATCATCCTGGCCGTGTTCCCGATGATGGCGGGGCTGGAGAATGCACGTCTGTTCTTTAATGTCGCCTTCTTTGTGGTTCTGGTTTCACTGCTCTTGCAGGGAACATCACTCTCGTGGGCGGCTAAAAAAGCCAAAGTGGTGGTTCCGCCAGTGGGACGTCCGGTGTCACGCGTTGGCCTGGATATTCATCCGGAAAATCCGTGGGAGCAGTTTGTTTATCAATTGAGTGCCGATAAATGGTGCGTGGGCGCGGCACTGCGCGATTTGCATATGCCAAAAGAGACGCGTATTGCGGCACTGTTTCGTGATAACCAGTTGCTTCATCCTACCGGCAGCACCCGACTGCGCGAAGGCGATGTGTTGTGTGTAATTGGTCGGGAACGCGATCTTCCGGCGCTCGGTAAACTGTTCAGCCAGTCGCCGCCGGTCGCGCTGGATCAACGCTTCTTTGGTGACTTCATTCTCGAAGCCAGCGCCAAATATGCTGATGTTGCGCTGATATATGGCCTGGAAGACGGGCGAGAATATCGTGATAAGCAGCAAACGCTGGGTGAAATTGTCCAGCAGTTGTTAGGCGCGGCACCGGTTGTCGGTGACCAGGTAGAGTTTGCCGGGATGATCTGGACGGTGGCCGAGAAAGAAGATAATGAAGTGTTGAAGATTGGCGTACGGGTGGCTGAAGAGGAAGCTGAATCTTAA", 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"gene_synonym", - "EcoGene:EG13898" - ], - [ - "gene_synonym", - "NP_415710.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76008" - ], - [ - "gene_synonym", - "JW1181" - ], - [ - "gene_synonym", - "GI:16129155" - ], - [ - "gene_synonym", - "ASAP:ABE-0004002" - ], - [ - "gene_synonym", - "ldcA" - ], - [ - "gene_synonym", - "GeneID:945756" - ], - [ - "gene_synonym", - "ycgQ" - ], - [ - "gene_synonym", - "ECK1180" - ], - [ - "gene_synonym", - "b1192" - ] - ], - "dna_sequence": "ATGTCTCTGTTTCACTTAATTGCCCCATCGGGTTACTGCATTAAACAGCACGCCGCGCTGCGTGGTATCCAGCGCCTTACCGACGCGGGGCATCAAGTCAATAACGTCGAGGTTATTGCCCGTCGTTGTGAGCGTTTTGCGGGTACGGAAACAGAGCGTCTGGAAGATCTCAATTCCCTTGCCAGACTGACTACCCCCAACACCATCGTGCTGGCTGTACGCGGCGGTTACGGTGCCAGTCGTTTACTGGCAGATATTGACTGGCAGGCACTGGTGGCTCGCCAACAACATGACCCGTTGCTCATTTGCGGACATAGCGATTTTACCGCCATTCAGTGCGGTCTTCTGGCGCATGGCAATGTCATCACCTTTAGCGGCCCCATGCTGGTAGCAAACTTTGGCGCGGATGAACTGAACGCCTTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCGAAGGCACGTTGTGGGGAGGCAATCTTGCGATGCTGATTTCACTGATCGGTACACCGTGGATGCCAAAAATTGAGAACGGTATTCTGGTGCTGGAAGATATTAACGAGCACCCTTTCCGGGTCGAACGTATGCTGTTGCAGCTCTATCATGCGGGAATTTTGCCACGTCAGAAGGCGATTATTCTCGGTAGCTTTAGCGGCAGCACGCCCAATGATTATGACGCAGGTTACAACCTGGAGTCAGTGTACGCGTTTTTGCGTTCCCGCCTGTCGATTCCACTCATTACCGGCCTCGATTTTGGTCATGAACAACGCACGGTTACGCTGCCGTTGGGCGCACATGCCATTCTGAATAACACCCGGGAAGGCACTCAGTTGACGATTAGCGGTCATCCTGTTCTTAAAATGTAA", - "dna_sequence_length": 915, - "functions": [ - "murein tetrapeptide carboxypeptidase", - "LD-carboxypeptidase A" - ], - "id": "CDS_1173", - "location": [ - [ - "NC_000913", - 1243080, - "-", - 915 - ] - ], - "md5": "9c65c2c850d5bebc08046c07cf11faab", - "parent_gene": "", - "protein_md5": "a9a7d65ac76c76eca701a94c40bf1a04", - "protein_translation": "MSLFHLIAPSGYCIKQHAALRGIQRLTDAGHQVNNVEVIARRCERFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLICGHSDFTAIQCGLLAHGNVITFSGPMLVANFGADELNAFTEHHFWLALRNETFTIEWQGEGPTCRAEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYHAGILPRQKAIILGSFSGSTPNDYDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVTLPLGAHAILNNTREGTQLTISGHPVLKM", - "protein_translation_length": 304, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C960" - ], - [ - "gene_synonym", - "NP_415711.2" - ], - [ - "gene_synonym", - "ycgP" - ], - [ - "gene_synonym", - "GeneID:945655" - ], - [ - "gene_synonym", - "emtA" - ], - [ - "gene_synonym", - "EcoGene:EG13897" - ], - [ - "gene_synonym", - "ASAP:ABE-0004006" - ], - [ - "gene_synonym", - "ECK1181" - ], - [ - "gene_synonym", - "GI:90111231" - ], - [ - "gene_synonym", - "b1193" - ], - [ - "gene_synonym", - "JW5821" - ], - [ - "gene_synonym", - "mltE" - ], - [ - "gene_synonym", - "sltZ" - ] - ], - "dna_sequence": "GTGAAATTGAGATGGTTTGCCTTTTTGATTGTGTTATTAGCGGGTTGTTCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGATGCAGTGGATGCCAATAAGCCAGAAAGCCGGTGCAGCCTGGGGCGTCGATCCACAATTGATCACGGCGATTATCGCTATCGAATCGGGTGGTAATCCGAACGCGGTGAGTAAATCGAATGCCATTGGTTTGATGCAGTTAAAAGCTTCAACCTCCGGACGTGATGTTTATCGCCGTATGGGCTGGAGTGGTGAGCCGACGACCAGCGAGCTGAAAAATCCAGAGCGTAATATTTCAATGGGGGCGGCTTACCTGAATATTCTGGAAACCGGCCCGCTGGCAGGCATTGAAGATCCGAAGGTACTGCAATATGCGCTGGTGGTGTCATACGCTAACGGGGCAGGTGCGCTGCTACGGACTTTCTCGTCAGATCGGAAAAAGGCGATCAGCAAAATCAACGATTTGGATGCTGACGAGTTCCTCGAACACGTAGCGCGAAATCACCCTGCGCCGCAGGCTCCGCGCTATATCTACAAACTTGAGCAGGCACTGGACGCGATGTAA", - "dna_sequence_length": 612, - "functions": [ - "lytic murein endotransglycosylase E" - ], - "id": "CDS_1174", - "location": [ - [ - "NC_000913", - 1243180, - "+", - 612 - ] - ], - "md5": "311e34a92f8e6234d092010a4c61a98b", - "parent_gene": "", - "protein_md5": "889132211d26295415f52e15bd7590c8", - "protein_translation": "MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEPTTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSDRKKAISKINDLDADEFLEHVARNHPAPQAPRYIYKLEQALDAM", - "protein_translation_length": 203, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004009" - ], - [ - "gene_synonym", - "GI:16129157" - ], - [ - "gene_synonym", - "JW1183" - ], - [ - "gene_synonym", - "ycgR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76010" - ], - [ - "gene_synonym", - "ECK1182" - ], - [ - "gene_synonym", - "NP_415712.1" - ], - [ - "gene_synonym", - "EcoGene:EG13899" - ], - [ - "gene_synonym", - "GeneID:947609" - ], - [ - "gene_synonym", - "b1194" - ] - ], - "dna_sequence": "GTGAGTCATTACCATGAGCAGTTCCTGAAACAAAATCCGTTAGCCGTCCTGGGCGTGTTACGCGATTTGCACAAAGCCGCAATTCCTTTGCGTCTCAGTTGGAATGGCGGGCAGCTGATCAGCAAATTACTGGCAATAACCCCGGATAAACTGGTGCTGGATTTCGGCAGTCAAGCCGAAGACAACATCGCCGTGCTAAAGGCACAGCACATTACCATTACCGCCGAAACTCAGGGTGCGAAAGTCGAGTTTACTGTTGAACAACTACAGCAGAGTGAATACTTGCAGCTTCCGGCATTTATTACCGTACCGCCTCCCACCTTATGGTTTGTACAACGACGCCGATATTTCCGCATCTCCGCCCCACTCCATCCGCCTTATTTTTGCCAGACCAAACTGGCGGATAACAGTACGTTACGTTTCCGCCTGTATGATTTGTCGTTAGGCGGCATGGGCGCATTACTGGAAACAGCAAAGCCTGCCGAATTACAAGAAGGCATGCGCTTCGCTCAGATTGAAGTCAACATGGGGCAATGGGGTGTTTTTCACTTTGACGCCCAGTTAATCTCCATCAGCGAGCGCAAAGTGATTGATGGCAAGAATGAAACCATCACCACTCCCCGTCTGAGCTTCCGTTTTCTTAACGTCAGCCCGACGGTGGAGCGGCAATTACAGCGGATTATTTTCTCTCTCGAGCGAGAAGCCCGGGAAAAAGCGGACAAAGTGCGCGACTGA", - "dna_sequence_length": 735, - "functions": [ - "flagellar velocity braking protein, c-di-GMP-regulated" - ], - "id": "CDS_1175", - "location": [ - [ - "NC_000913", - 1244527, - "-", - 735 - ] - ], - "md5": "7be0ba1274c074b635601124f242fd9e", - "parent_gene": "", - "protein_md5": "e1e6d8d5f2ff5784fdd781f273b9662f", - "protein_translation": "MSHYHEQFLKQNPLAVLGVLRDLHKAAIPLRLSWNGGQLISKLLAITPDKLVLDFGSQAEDNIAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFITVPPPTLWFVQRRRYFRISAPLHPPYFCQTKLADNSTLRFRLYDLSLGGMGALLETAKPAELQEGMRFAQIEVNMGQWGVFHFDAQLISISERKVIDGKNETITTPRLSFRFLNVSPTVERQLQRIIFSLEREAREKADKVRD", - "protein_translation_length": 244, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129158" - ], - [ - "gene_synonym", - "GeneID:945760" - ], - [ - "gene_synonym", - "JW1184" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76011" - ], - [ - "gene_synonym", - "ASAP:ABE-0004014" - ], - [ - "gene_synonym", - "ECK1183" - ], - [ - "gene_synonym", - "tag" - ], - [ - "gene_synonym", - "NP_415713.1" - ], - [ - "gene_synonym", - "EcoGene:EG14338" - ], - [ - "gene_synonym", - "ymgE" - ], - [ - "gene_synonym", - "b1195" - ] - ], - "dna_sequence": "ATGGGAATTATTGCCTGGATTATTTTTGACCTGATAGCCGGCATTATCGCCAAGCTAATCATGCCGGGGCGTGATGGTGGTGGATTTTTCCTGACCTGTATTCTCGGGATAGTCGGTGCGGTGGTCGGCGGCTGGCTGGCGACCATGTTTGGCATTGGCGGCTCCATCAGTGGTTTTAATCTGCACAGCTTCCTGGTGGCGGTGGTGGGAGCTATTCTCGTTCTGGGCATATTCCGCCTCCTGCGAAGAGAATAA", - "dna_sequence_length": 255, - "functions": [ - "UPF0410 family putative inner membrane protein" - ], - "id": "CDS_1176", - "location": [ - [ - "NC_000913", - 1244728, - "+", - 255 - ] - ], - "md5": "23198de88afc863cb03f0dc6c170006c", - "parent_gene": "", - "protein_md5": "baa8b47e694a5018f0ec81cde9229747", - "protein_translation": "MGIIAWIIFDLIAGIIAKLIMPGRDGGGFFLTCILGIVGAVVGGWLATMFGIGGSISGFNLHSFLVAVVGAILVLGIFRLLRRE", - "protein_translation_length": 84, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ycgY" - ], - [ - "gene_synonym", - "ASAP:ABE-0004019" - ], - [ - "gene_synonym", - "GI:16129159" - ], - [ - "gene_synonym", - "NP_415714.1" - ], - [ - "gene_synonym", - "JW1185" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76012" - ], - [ - "gene_synonym", - "GeneID:945761" - ], - [ - "gene_synonym", - "EcoGene:EG14275" - ], - [ - "gene_synonym", - "ECK1184" - ], - [ - "gene_synonym", - "b1196" - ] - ], - "dna_sequence": "GTGATTCAGAAAATAAATATTTTAGACAGTAGCCAGTCAGGCGTTAAAAATGGGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTGAACATTTAGAATTGATCAATCCTTCTGGCAGATTAAGCCAAAATACCCGTTCGGCAATGCTTCAGTTACGCGAAGAGGAATGGTCTGAATTCTTTTTTTGGTTGCTAAATTCTCTGGAGTGTCTGGATTATGTGATTATTAATTTAACTCCAGAAAGCAAAAAAACGTTGATGAGTGAACACCGTAACAATATTCAGGTAGCAATTGATGCTTTATATAGCCAACGTCGGCGTAAATCGCCGGGTGATGAAAGTGAAACACTTACCCGTAGAAATGACGCTATCTTCGGCAACCACGTATGGCAAACATTTGCGCAATACTTCCCGCCAGGACTTGAAAAACCGTCTGTGTAG", - "dna_sequence_length": 441, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1177", - "location": [ - [ - "NC_000913", - 1245160, - "+", - 441 - ] - ], - "md5": "338f18b610bb359a37f57ff428743a07", - "parent_gene": "", - "protein_md5": "1a7b95cc54c14563386ef591bdbf4c02", - "protein_translation": "MIQKINILDSSQSGVKNGADSEAVLAALIEHLELINPSGRLSQNTRSAMLQLREEEWSEFFFWLLNSLECLDYVIINLTPESKKTLMSEHRNNIQVAIDALYSQRRRKSPGDESETLTRRNDAIFGNHVWQTFAQYFPPGLEKPSV", - "protein_translation_length": 146, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "osmA" - ], - [ - "gene_synonym", - "GI:16129160" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P13482" - ], - [ - "gene_synonym", - "treA" - ], - [ - "gene_synonym", - "EcoGene:EG11017" - ], - [ - "gene_synonym", - "GeneID:945757" - ], - [ - "gene_synonym", - "JW1186" - ], - [ - "gene_synonym", - "ECK1185" - ], - [ - "gene_synonym", - "NP_415715.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004021" - ], - [ - "gene_synonym", - "b1197" - ] - ], - "dna_sequence": "ATGAAATCCCCCGCACCTTCTCGCCCGCAAAAAATGGCGTTAATTCCAGCCTGTATCTTTTTGTGTTTCGCTGCGCTATCGGTGCAGGCAGAAGAAACACCGGTAACACCACAGCCGCCTGATATTTTATTAGGGCCGCTGTTTAATGATGTGCAAAACGCCAAACTTTTTCCGGACCAAAAAACCTTTGCCGATGCCGTGCCGAACAGCGATCCGCTGATGATCCTTGCTGATTATCGGATGCAGCAAAACCAGAGCGGATTTGATCTGCGCCATTTCGTTAACGTCAATTTCACCCTGCCGAAAGAAGGCGAGAAATATGTTCCGCCAGAGGGGCAGTCACTGCGCGAACATATTGACGGACTTTGGCCGGTATTAACGCGTTCTACCGAAAACACCGAAAAATGGGATTCTCTGTTACCGCTGCCGGAACCTTATGTCGTGCCGGGCGGACGCTTTCGCGAGGTATATTACTGGGACAGTTACTTCACCATGTTAGGACTTGCCGAAAGCGGTCACTGGGATAAAGTCGCGGATATGGTGGCCAATTTTGCTCATGAAATAGACACTTACGGTCATATTCCCAACGGCAACCGCAGTTACTATTTAAGCCGCTCGCAACCGCCCTTCTTTGCCCTGATGGTAGAGTTACTGGCGCAGCATGAAGGCGATGCCGCGTTGAAGCAATACCTGCCGCAAATGCAAAAAGAATATGCTTACTGGATGGACGGTGTTGAAAACCTGCAAGCCGGACAACAGGAAAAACGCGTTGTCAAACTTCAGGATGGTACCCTTCTCAACCGCTACTGGGACGATCGCGATACGCCACGACCAGAGTCATGGGTGGAAGATATTGCCACCGCCAAAAGCAATCCGAATCGACCTGCCACTGAAATTTACCGCGACCTGCGCTCTGCCGCTGCGTCTGGCTGGGATTTCAGCTCGCGCTGGATGGACAACCCGCAGCAGTTAAATACCTTACGCACCACCAGCATCGTACCGGTCGATCTGAACAGCCTGATGTTTAAAATGGAAAAAATCCTCGCCCGCGCCAGCAAAGCTGCCGGAGATAACGCGATGGCAAACCAGTACGAAACGCTGGCAAATGCCCGTCAAAAAGGGATCGAAAAATACCTGTGGAACGATCAACAAGGCTGGTATGCCGATTACGACCTGAAAAGTCATAAAGTGCGCAATCAGTTAACCGCGGCCGCCCTGTTCCCGCTGTACGTCAATGCGGCAGCGAAAGATCGCGCCAACAAAATGGCGACGGCGACGAAAACACATCTGCTGCAACCCGGCGGCCTGAACACCACGTCGGTGAAAAGTGGGCAACAATGGGATGCGCCAAATGGCTGGGCACCGTTACAGTGGGTCGCGACAGAAGGATTACAAAACTACGGGCAAAAAGAGGTGGCGATGGACATTAGCTGGCACTTCCTGACCAATGTTCAGCACACCTATGACCGGGAGAAAAAGCTGGTGGAAAAATATGATGTCAGCACCACCGGAACGGGGGGCGGCGGTGGCGAATATCCATTACAGGATGGCTTTGGCTGGACCAATGGCGTGACGCTGAAAATGCTGGATTTGATCTGCCCGAAAGAGCAACCGTGTGACAATGTTCCGGCGACGCGTCCGACCGTTAAGTCAGCAACGACGCAACCCTCAACCAAAGAGGCACAACCCACACCTTAA", - "dna_sequence_length": 1698, - "functions": [ - "periplasmic trehalase" - ], - "id": "CDS_1178", - "location": [ - [ - "NC_000913", - 1247376, - "-", - 1698 - ] - ], - "md5": "c5bfedbdbb2ed93f3a6380e6d8c899b3", - "parent_gene": "", - "protein_md5": "d4bc5910f71bdea9b94628450da93565", - "protein_translation": "MKSPAPSRPQKMALIPACIFLCFAALSVQAEETPVTPQPPDILLGPLFNDVQNAKLFPDQKTFADAVPNSDPLMILADYRMQQNQSGFDLRHFVNVNFTLPKEGEKYVPPEGQSLREHIDGLWPVLTRSTENTEKWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGDAALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHKVRNQLTAAALFPLYVNAAAKDRANKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQPCDNVPATRPTVKSATTQPSTKEAQPTP", - "protein_translation_length": 565, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945749" - ], - [ - "gene_synonym", - "JW5185" - ], - [ - "gene_synonym", - "ASAP:ABE-0004024" - ], - [ - "gene_synonym", - "dhaH" - ], - [ - "gene_synonym", - "GI:226524708" - ], - [ - "gene_synonym", - "dhaM" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37349" - ], - [ - "gene_synonym", - "NP_415716.4" - ], - [ - "gene_synonym", - "b1198" - ], - [ - "gene_synonym", - "ECK1186" - ], - [ - "gene_synonym", - "EcoGene:EG12399" - ], - [ - "gene_synonym", - "ycgC" - ], - [ - "gene_synonym", - "ptsD" - ] - ], - "dna_sequence": "ATGGTAAACCTGGTCATAGTTTCACATAGCAGCCGACTGGGAGAAGGTGTCGGTGAATTAGCCCGTCAGATGTTAATGAGTGATAGTTGTAAAATCGCCATTGCCGCGGGAATTGACGATCCACAAAATCCCATTGGTACCGATGCCGTCAAAGTGATGGAGGCCATCGAATCTGTTGCTGATGCCGACCATGTGCTGGTCATGATGGATATGGGTAGCGCATTATTGAGTGCTGAAACTGCGCTGGAATTGCTGGCTCCCGAGATCGCCGCAAAAGTACGTTTGTGTGCTGCGCCGTTGGTCGAAGGTACACTGGCAGCAACGGTCAGCGCGGCCTCGGGGGCGGATATCGACAAAGTTATCTTTGACGCCATGCATGCGCTGGAAGCCAAACGTGAACAACTGGGTTTACCGTCCTCCGACACTGAAATCTCTGACACATGTCCTGCGTACGATGAAGAAGCCCGTTCTCTGGCGGTGGTCATAAAAAACCGTAACGGCCTGCATGTACGTCCGGCCTCCCGGCTGGTTTATACCTTATCGACATTTAATGCCGATATGTTGCTGGAAAAAAACGGCAAATGCGTCACACCAGAGAGTATTAACCAGATTGCGTTACTACAAGTTCGCTATAACGATACGCTGCGCCTGATTGCGAAAGGGCCAGAAGCTGAAGAGGCACTGATCGCTTTCCGTCAGCTGGCTGAAGATAACTTTGGTGAAACGGAGGAAGTCGCTCCACCTACTCTGCGTCCCGTTCCGCCTGTTTCGGGTAAAGCCTTTTATTATCAACCAGTTTTATGTACGGTACAGGCAAAATCAACCCTGACCGTGGAAGAAGAACAAGATCGATTACGCCAGGCTATTGACTTCACGTTATTAGATCTGATGACGTTAACAGCGAAAGCAGAAGCCAGCGGGCTTGACGATATTGCCGCAATCTTTTCTGGTCACCATACACTGTTAGATGATCCGGAACTGCTGGCGGCGGCAAGCGAACTCCTTCAGCATGAACATTGCACGGCAGAATATGCCTGGCAGCAAGTTCTTAAAGAACTTAGCCAGCAATACCAGCAACTGGATGATGAATATCTACAAGCTCGCTATATTGATGTGGACGATCTTCTGCATCGCACCCTGGTCCACCTGACCCAAACGAAAGAAGAACTCCCGCAGTTTAACTCGCCAACTATTCTACTGGCGGAGAACATTTATCCTTCCACAGTACTGCAACTGGATCCGGCGGTTGTAAAAGGTATCTGCCTTAGCGCCGGAAGTCCGGTATCCCACAGCGCCCTAATCGCCCGTGAACTGGGGATTGGCTGGATTTGCCAGCAGGGTGAGAAACTGTATGCGATACAACCAGAAGAAACGCTAACGCTGGACGTTAAAACGCAACGTTTCAACCGTCAGGGTTAA", - "dna_sequence_length": 1419, - "functions": [ - "putative dihydroxyacetone-specific PTS enzymes: HPr, EI components" - ], - "id": "CDS_1179", - "location": [ - [ - "NC_000913", - 1249114, - "-", - 1419 - ] - ], - "md5": "b9846ad8bee4c624668ea7eb2bdd9701", - "parent_gene": "", - "protein_md5": "5509eda48bbf12602080c90d3a56a279", - "protein_translation": "MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNPIGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPEIAAKVRLCAAPLVEGTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAVVIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLIAKGPEAEEALIAFRQLAEDNFGETEEVAPPTLRPVPPVSGKAFYYQPVLCTVQAKSTLTVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDDIAAIFSGHHTLLDDPELLAAASELLQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQFNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKLYAIQPEETLTLDVKTQRFNRQG", - "protein_translation_length": 472, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129162" - ], - [ - "gene_synonym", - "NP_415717.1" - ], - [ - "gene_synonym", - "GeneID:945748" - ], - [ - "gene_synonym", - "ycgS" - ], - [ - "gene_synonym", - "JW5186" - ], - [ - "gene_synonym", - "EcoGene:EG13900" - ], - [ - "gene_synonym", - "dhaL" - ], - [ - "gene_synonym", - "ASAP:ABE-0004026" - ], - [ - "gene_synonym", - "dhaK2" - ], - [ - "gene_synonym", - "ECK1187" - ], - [ - "gene_synonym", - "b1199" - ], - [ - "gene_synonym", - "ptsD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76014" - ] - ], - "dna_sequence": "ATGTCACTGAGCAGAACTCAAATTGTTAACTGGCTCACTCGTTGTGGCGATATTTTCAGCACCGAGAGCGAGTATCTTACCGGACTGGATCGCGAAATTGGCGATGCTGACCACGGGCTAAATATGAACCGAGGCTTTAGCAAAGTGGTGGAAAAACTCCCTGCTATCGCAGATAAAGATATCGGTTTCATTCTCAAGAATACCGGTATGACGCTGCTTTCCAGCGTCGGTGGTGCCAGTGGTCCGCTGTTCGGTACCTTCTTTATCCGCGCCGCACAGGCGACCCAGGCACGGCAAAGCCTGACACTGGAAGAGCTTTATCAGATGTTCCGCGATGGCGCGGACGGCGTAATCAGTCGCGGGAAAGCCGAACCTGGCGATAAAACCATGTGTGATGTGTGGGTGCCGGTGGTGGAATCGTTACGTCAGTCCAGCGAGCAAAATCTCTCTGTTCCGGTGGCGCTCGAAGCTGCCAGTAGCATCGCCGAATCCGCTGCACAAAGTACGATTACGATGCAAGCCCGCAAAGGCCGCGCCAGTTATCTCGGTGAACGCAGTATTGGTCACCAGGATCCCGGCGCGACCTCGGTGATGTTTATGATGCAAATGTTGGCGTTAGCCGCAAAAGAGTAA", - "dna_sequence_length": 633, - "functions": [ - "dihydroxyacetone kinase, C-terminal domain" - ], - "id": "CDS_1180", - "location": [ - [ - "NC_000913", - 1249757, - "-", - 633 - ] - ], - "md5": "79a841d94a16d4db476beb3e4a823c36", - "parent_gene": "", - "protein_md5": "1448673b9a3465ab1c7d40e7786b0648", - "protein_translation": "MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLTLEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASSIAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE", - "protein_translation_length": 210, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76015" - ], - [ - "gene_synonym", - "GeneID:945747" - ], - [ - "gene_synonym", - "GI:162135900" - ], - [ - "gene_synonym", - "ASAP:ABE-0004029" - ], - [ - "gene_synonym", - "dhaK" - ], - [ - "gene_synonym", - "b1200" - ], - [ - "gene_synonym", - "ycgT" - ], - [ - "gene_synonym", - "ptsD" - ], - [ - "gene_synonym", - "dhaK1" - ], - [ - "gene_synonym", - "EcoGene:EG13901" - ], - [ - "gene_synonym", - "ECK1188" - ], - [ - "gene_synonym", - "NP_415718.6" - ], - [ - "gene_synonym", - "JW5187" - ] - ], - "dna_sequence": "ATGAAAAAATTGATCAATGATGTGCAAGACGTACTGGACGAACAACTGGCAGGACTGGCGAAAGCGCATCCATCGCTGACACTGCATCAGGATCCGGTGTATGTCACCCGAGCTGATGCCCCTGTTGCAGGAAAAGTCGCCCTGCTGTCGGGTGGCGGCAGCGGACACGAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCGACGCCCGATAAAATCTTTGAATGCGCCATGCAAGTTGATGGCGGCGAAGGTGTACTGTTGATTATCAAAAATTACACCGGCGATATTCTTAACTTTGAAACAGCGACCGAGTTACTGCACGATAGCGGCGTAAAAGTGACCACTGTGGTCATTGATGACGACGTTGCGGTAAAAGACAGTCTTTATACTGCCGGGCGACGCGGCGTTGCCAACACCGTATTAATTGAAAAACTCGTAGGCGCAGCGGCGGAGCGTGGCGACTCACTGGACGCCTGTGCGGAACTGGGGCGTAAGCTGAATAATCAAGGCCACTCAATAGGTATCGCTCTCGGTGCCTGTACCGTTCCTGCCGCGGGCAAACCTTCTTTTACCCTGGCGGATAATGAGATGGAGTTTGGCGTCGGCATTCATGGTGAGCCGGGTATTGACCGCCGCCCCTTCTCTTCCCTTGATCAAACCGTCGATGAAATGTTCGACACCCTGCTGGTAAATGGCTCATACCATCGCACTTTGCGTTTCTGGGATTATCAACAAGGCAGTTGGCAGGAAGAACAACAAACCAAACAACCGCTCCAGTCTGGCGATCGGGTGATTGCGCTGGTTAACAATCTTGGCGCAACTCCGCTTTCTGAGCTGTACGGCGTCTATAACCGCCTGACCACACGTTGCCAGCAAGCGGGATTGACTATCGAACGTAATTTAATTGGCGCGTACTGCACCTCACTGGATATGACCGGTTTCTCAATCACCTTACTGAAAGTTGATGACGAAACGCTGGCACTCTGGGACGCCCCGGTCCACACCCCGGCCCTTAACTGGGGTAAATAA", - "dna_sequence_length": 1071, - "functions": [ - "dihydroxyacetone kinase, PTS-dependent, dihydroxyacetone-binding subunit" - ], - "id": "CDS_1181", - "location": [ - [ - "NC_000913", - 1250838, - "-", - 1071 - ] - ], - "md5": "fa1c914c3e36e44aa562f1a9b6e0f8bd", - "parent_gene": "", - "protein_md5": "4231711d4aa58b4fb6793a29453a8390", - "protein_translation": "MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVAGKVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLVGAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRPFSSLDQTVDEMFDTLLVNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRLTTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLKVDDETLALWDAPVHTPALNWGK", - "protein_translation_length": 356, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5188" - ], - [ - "gene_synonym", - "GeneID:945743" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76016" - ], - [ - "gene_synonym", - "b1201" - ], - [ - "gene_synonym", - "ycgU" - ], - [ - "gene_synonym", - "EcoGene:EG13902" - ], - [ - "gene_synonym", - "NP_415719.2" - ], - [ - "gene_synonym", - "dhaR" - ], - [ - "gene_synonym", - "ASAP:ABE-0004033" - ], - [ - "gene_synonym", - "ECK1189" - ], - [ - "gene_synonym", - "GI:90111234" - ], - [ - "gene_synonym", - "ptsD" - ] - ], - "dna_sequence": "ATGAGTGGCGCTTTTAACAACGATGGTCGGGGCATATCTCCCTTAATTGCAACCTCCTGGGAGCGATGCAATAAGCTGATGAAACGGGAGACATGGAACGTACCACATCAGGCCCAGGGCGTGACATTTGCTTCTATTTATCGGCGTAAGAAAGCGATGCTGACGCTCGGGCAGGCTGCGCTGGAAGATGCCTGGGAATATATGGCACCGCGAGAGTGTGCGCTGTTTATCCTCGATGAAACCGCCTGCATTCTCAGCCGTAATGGCGATCCGCAAACCTTGCAGCAGCTAAGTGCACTGGGATTCAATGACGGCACGTATTGCGCCGAGGGAATTATTGGTACTTGTGCGCTATCGTTAGCGGCTATCTCTGGTCAGGCCGTGAAAACGATGGCCGATCAACATTTCAAACAGGTACTCTGGAACTGGGCCTTTTGTGCAACGCCGTTGTTTGACAGCAAGGGCCGATTGACGGGAACAATAGCGCTGGCGTGTCCGGTTGAGCAAACTACCGCAGCTGATTTGCCGTTGACGTTGGCAATCGCCCGCGAGGTCGGAAATTTACTGCTGACGGACAGTTTGCTCGCTGAAACTAACCGTCATTTAAATCAACTTAATGCCCTGTTAGAAAGTATGGATGATGGCGTGATTAGCTGGGACGAGCAGGGTAATTTGCAATTTATTAATGCCCAGGCGGCGCGGGTCTTGCGCCTTGACGCGACGGCAAGTCAGGGACGGGCAATCACTGAACTCTTAACGTTACCCGCCGTATTGCAACAAGCAATAAAACAGGCACATCCGCTCAAACACGTAGAAGCAACCTTTGAAAGCCAGCACCAGTTTATTGATGCGGTGATAACCCTTAAACCGATAATAGAAACGCAGGGAACCAGCTTTATTTTGTTGCTCCATCCTGTGGAACAGATGCGGCAGTTGATGACCAGTCAATTAGGAAAAGTCAGCCATACCTTCGCTCATATGCCACAGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTTCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTGCAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATCGCACGGACAATGAAAATGGCCGTCTGAGTCGGCTGGAACTGGCACACGGCGGCACGCTGTTTCTTGAAAAGATTGAATATCTGGCGGTGGAGTTACAGTCTGCTTTGCTTCAGGTTATCAAGCAGGGGGTTATCACGCGACTGGATGCGCGGCGTTTAATACCAATTGATGTCAAAGTGATTGCAACAACGACCGCGGACCTCGCAATGCTGGTGGAACAAAATCGTTTTAGTCGCCAGCTGTATTACGCGCTGCATGCATTTGAAATTACCATCCCGCCTCTGCGTATGCGGCGTGGCAGCATTCCGGCGCTGGTGAATAACAAATTACGCAGTCTTGAAAAACGCTTCTCTACGCGGCTGAAAATTGATGACGATGCCCTCGCTCGCCTGGTTTCTTGTGCATGGCCAGGCAACGATTTTGAACTTTACAGCGTCATCGAGAATCTTGCTCTGAGTAGTGATAACGGGCGCATTCGCGTCAGTGATTTGCCGGAACATCTGTTTACCGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGGAAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCGCCGGGTATGA", - "dna_sequence_length": 1920, - "functions": [ - "dhaKLM operon transcription activator" - ], - "id": "CDS_1182", - "location": [ - [ - "NC_000913", - 1251066, - "+", - 1920 - ] - ], - "md5": "8b667ff19b92a1660fd19cadb1a3095d", - "parent_gene": "", - "protein_md5": "cf1e4942f42b178bdec6650fc8766203", - "protein_translation": "MSGAFNNDGRGISPLIATSWERCNKLMKRETWNVPHQAQGVTFASIYRRKKAMLTLGQAALEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSALGFNDGTYCAEGIIGTCALSLAAISGQAVKTMADQHFKQVLWNWAFCATPLFDSKGRLTGTIALACPVEQTTAADLPLTLAIAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVISWDEQGNLQFINAQAARVLRLDATASQGRAITELLTLPAVLQQAIKQAHPLKHVEATFESQHQFIDAVITLKPIIETQGTSFILLLHPVEQMRQLMTSQLGKVSHTFAHMPQDDPQTRRLIHFGRQAARSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCELYGDAALAEEFIGGDRTDNENGRLSRLELAHGGTLFLEKIEYLAVELQSALLQVIKQGVITRLDARRLIPIDVKVIATTTADLAMLVEQNRFSRQLYYALHAFEITIPPLRMRRGSIPALVNNKLRSLEKRFSTRLKIDDDALARLVSCAWPGNDFELYSVIENLALSSDNGRIRVSDLPEHLFTEQATDDVSATRLSTSLSFAEVEKEAIINAAQVTGGRIQEMSALLGIGRTTLWRKMKQHGIDAGQFKRRV", - "protein_translation_length": 639, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415720.1" - ], - [ - "gene_synonym", - "GI:16129165" - ], - [ - "gene_synonym", - "b1202" - ], - [ - "gene_synonym", - "JW1193" - ], - [ - "gene_synonym", - "ycgV" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76017" - ], - [ - "gene_synonym", - "ASAP:ABE-0004035" - ], - [ - "gene_synonym", - "ECK1190" - ], - [ - "gene_synonym", - "GeneID:945767" - ], - [ - "gene_synonym", - "EcoGene:EG13903" - ] - ], - "dna_sequence": "ATGGGCATCAAACAACACAATGGGAATACCAAAGCAGATCGTCTCGCTGAATTAAAAATCCGTTCGCCCTCAATTCAACTGATAAAATTTGGCGCTATTGGTTTGAATGCAATTATCTTTTCCCCCCTGCTGATAGCTGCTGATACAGGAAGTCAATATGGCACCAATATTACTATTAATGATGGTGACAGAATTACAGGAGATACCGCCGATCCATCAGGAAACCTCTATGGTGTAATGACCCCAGCAGGAAACACGCCTGGCAATATCAACCTGGGTAATGATGTCACCGTCAATGTCAACGACGCCTCTGGATATGCAAAAGGAATCATTATTCAGGGCAAAAACAGCTCCCTGACAGCTAACCGACTCACAGTAGATGTTGTTGGTCAAACCTCTGCCATCGGCATTAACTTAATTGGTGACTATACCCATGCTGACTTAGGCACAGGCAGCACCATTAAGAGTAACGATGACGGCATCATTATTGGGCATAGCTCAACACTAACAGCCACTCAATTCACCATTGAAAACTCGAACGGTATAGGCCTAACCATCAATGACTATGGCACCAGTGTCGATCTTGGAAGCGGAAGTAAAATCACGACCGATGGAAGTACAGGTGTTTATATCGGTGGTCTCAACGGCAATAACGCCAATGGTGCTGCGCGTTTTACGGCTACAGACCTGACAATCGATGTTCAGGGCTACAGCGCCATGGGGATAAACGTACAGAAAAACTCTGTTGTCGATCTCGGAACAAACAGTACCATTAAAACCAATGGCGATAATGCTCACGGCCTCTGGAGCTTTGGCCAGGTTAGCGCGAATGCACTCACTGTTGATGTAACTGGAGCCGCGGCCAATGGCGTCGAAGTTCGTGGTGGTACAACCACTATCGGTGCAGATAGCCATATTTCTTCCGCGCAGGGCGGTGGCCTCGTCACCAGTGGTTCAGACGCGATAATCAATTTTACTGGCACGGCAGCGCAACGAAACAGCATCTTTTCCGGCGGTTCTTATGGTGCCTCGGCCCAGACGGCAACGGCTGTTGTCAACATGCAAAATACCGATATTACAGTTGATCGTAATGGCAGTCTGGCGCTGGGTTTGTGGGCTCTCAGCGGCGGTAGAATAACCGGAGACAGTTTGGCTATCACCGGCGCGGCAGGAGCCAGGGGAATTTATGCCATGACCAACAGCCAGATCGACCTCACGAGCGATCTGGTCATTGATATGAGTACACCCGACCAGATGGCCATCGCAACGCAACATGACGATGGTTATGCCGCCAGCCGCATCAACGCCTCGGGTCGTATGCTTATCAACGGTAGCGTTCTTTCCAAAGGTGGGCTAATCAATCTGGATATGCACCCTGGGTCGGTTTGGACAGGTTCCTCCCTCAGCGATAATGTCAATGGCGGAAAACTGGACGTTGCAATGAATAACAGCGTCTGGAACGTAACAAGTAATTCTAATCTCGACACGCTGGCGCTGAGCCATTCAACTGTCGATTTTGCCAGCCACGGGTCAACTGCCGGCACATTTGCCACATTAAACGTAGAGAACCTGAGCGGTAACAGTACCTTTATTATGCGTGCTGATGTTGTTGGCGAGGGTAATGGCGTTAATAATAAAGGGGATTTATTGAATATCAGCGGGAGTAGTGCTGGTAATCACGTATTGGCTATCCGCAACCAGGGCAGCGAGGCCACAACGGGAAATGAAGTTCTGACAGTGGTAAAAACCACTGACGGCGCGGCCTCGTTCAGCGCGTCTTCTCAGGTTGAGTTGGGGGGATATCTGTACGATGTGCGTAAAAATGGCACTAACTGGGAGCTTTACGCTTCCGGGACAGTTCCGGAACCGACTCCTAATCCTGAACCCACACCAGCTCCCGCTCAGCCTCCCATAGTCAACCCCGATCCTACGCCTGAACCCGCTCCCACGCCTAAACCCACCACGACCGCAGATGCTGGCGGCAATTATCTCAATGTCGGTTACTTATTGAACTATGTTGAAAACCGTACGCTGATGCAACGGATGGGTGACCTGCGAAATCAGAGTAAAGACGGTAATATCTGGTTGCGCAGTTATGGGGGAAGCCTGGACTCCTTTGCCAGTGGCAAACTGAGCGGCTTTGACATGGGTTACAGCGGTATCCAGTTTGGTGGGGATAAACGTCTCTCTGATGTAATGCCGTTGTATGTCGGTCTGTATATTGGCTCAACACATGCATCGCCGGACTATAGCGGAGGCGACGGTACCGCACGTTCAGACTACATGGGAATGTACGCCAGTTACATGGCACAAAACGGTTTTTACAGCGATCTCGTTATAAAAGCATCGCGCCAGAAAAATAGTTTCCACGTACTGGACAGTCAGAACAACGGCGTTAACGCCAACGGCACTGCGAATGGAATGAGCATCTCCCTGGAAGCCGGGCAGAGGTTCAACCTGTCCCCTACTGGTTATGGGTTCTATATAGAGCCGCAAACCCAGCTTACATACAGCCACCAGAATGAGATGACTATGAAGGCGAGTAATGGCCTCAATATACATCTGAATCACTACGAATCGCTGCTGGGGCGTGCCAGCATGATACTGGGGTATGACATCACCGCAGGCAACAGCCAGCTGAATGTCTATGTGAAGACTGGCGCTATCCGCGAGTTTTCAGGGGATACCGAATATCTGTTGAACAACTCCCGGGAGAAGTACAGTTTCAAAGGTAATGGCTGGAATAACGGCGTGGGAGTCAGTGCACAGTATAACAAACAGCACACATTCTATCTCGAAGCGGATTACACGCAGGGTAACCTCTTTGATCAGAAGCAAGTCAACGGAGGATATCGCTTCAGCTTTTAA", 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"MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAIIFSPLLIAADTGSQYGTNITINDGDRITGDTADPSGNLYGVMTPAGNTPGNINLGNDVTVNVNDASGYAKGIIIQGKNSSLTANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDGIIIGHSSTLTATQFTIENSNGIGLTINDYGTSVDLGSGSKITTDGSTGVYIGGLNGNNANGAARFTATDLTIDVQGYSAMGINVQKNSVVDLGTNSTIKTNGDNAHGLWSFGQVSANALTVDVTGAAANGVEVRGGTTTIGADSHISSAQGGGLVTSGSDAIINFTGTAAQRNSIFSGGSYGASAQTATAVVNMQNTDITVDRNGSLALGLWALSGGRITGDSLAITGAAGARGIYAMTNSQIDLTSDLVIDMSTPDQMAIATQHDDGYAASRINASGRMLINGSVLSKGGLINLDMHPGSVWTGSSLSDNVNGGKLDVAMNNSVWNVTSNSNLDTLALSHSTVDFASHGSTAGTFATLNVENLSGNSTFIMRADVVGEGNGVNNKGDLLNISGSSAGNHVLAIRNQGSEATTGNEVLTVVKTTDGAASFSASSQVELGGYLYDVRKNGTNWELYASGTVPEPTPNPEPTPAPAQPPIVNPDPTPEPAPTPKPTTTADAGGNYLNVGYLLNYVENRTLMQRMGDLRNQSKDGNIWLRSYGGSLDSFASGKLSGFDMGYSGIQFGGDKRLSDVMPLYVGLYIGSTHASPDYSGGDGTARSDYMGMYASYMAQNGFYSDLVIKASRQKNSFHVLDSQNNGVNANGTANGMSISLEAGQRFNLSPTGYGFYIEPQTQLTYSHQNEMTMKASNGLNIHLNHYESLLGRASMILGYDITAGNSQLNVYVKTGAIREFSGDTEYLLNNSREKYSFKGNGWNNGVGVSAQYNKQHTFYLEADYTQGNLFDQKQVNGGYRFSF", - "protein_translation_length": 955, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129166" - ], - [ - "gene_synonym", - "b1203" - ], - [ - "gene_synonym", - "GeneID:945769" - ], - [ - "gene_synonym", - "gtp1" - ], - [ - "gene_synonym", - "JW1194" - ], - [ - "gene_synonym", - "NP_415721.1" - ], - [ - "gene_synonym", - "ychF" - ], - [ - "gene_synonym", - "EcoGene:EG11404" - ], - [ - "gene_synonym", - "ECK1191" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABU2" - ], - [ - "gene_synonym", - "ASAP:ABE-0004038" - ], - [ - "gene_synonym", - "engD" - ] - ], - "dna_sequence": "ATGGGATTCAAATGCGGTATCGTCGGTTTGCCCAACGTCGGGAAATCTACCCTGTTCAACGCGCTGACCAAAGCCGGTATTGAAGCGGCCAACTTTCCATTCTGCACCATTGAGCCGAACACAGGCGTCGTACCAATGCCTGATCCTCGCCTGGATCAACTGGCTGAAATCGTAAAACCGCAGCGTACGCTTCCCACGACCATGGAATTTGTCGATATCGCCGGTCTGGTAAAAGGCGCATCGAAAGGCGAAGGTCTGGGTAACCAGTTCCTGACCAACATCCGTGAAACCGAAGCGATCGGTCACGTTGTTCGCTGCTTTGAAAATGACAACATCATTCACGTTTCCGGCAAAGTTAACCCGGCTGACGATATTGAAGTTATCAACACCGAACTGGCGCTGGCAGACCTCGACACCTGCGAACGTGCGATTCATCGCGTACAGAAGAAAGCCAAAGGTGGCGATAAAGACGCGAAAGCTGAGCTGGCGGTCCTGGAAAAATGCCTGCCCCAGTTGGAAAATGCAGGTATGCTGCGCGCGCTGGATTTAAGCGCTGAAGAGAAAGCGGCTATTCGTTACCTGAGCTTCCTGACGCTGAAACCAACAATGTACATCGCCAACGTCAACGAAGACGGTTTTGAAAACAACCCATATCTTGACCAGGTGCGTGAAATCGCGGCGAAAGAAGGTTCTGTTGTGGTTCCGGTTTGTGCTGCTGTTGAAGCAGACATTGCCGAACTGGACGACGAAGAACGTGACGAGTTTATGCAGGAGCTTGGGCTGGAAGAGCCGGGCCTGAACCGTGTGATCCGTGCCGGTTATAAACTGCTGAACCTGCAAACTTACTTCACCGCTGGGGTGAAAGAAGTGCGTGCATGGACCATTCCGGTTGGAGCAACCGCGCCGCAGGCAGCGGGCAAAATCCATACTGATTTTGAAAAAGGCTTTATCCGTGCACAAACCATCTCGTTTGAAGATTTCATCACTTACAAAGGTGAACAAGGCGCGAAAGAAGCAGGCAAAATGCGTGCAGAAGGTAAAGATTACATCGTGAAAGATGGCGATGTGATGAACTTCCTTTTCAACGTCTAA", 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"EcoGene:EG10785" - ], - [ - "gene_synonym", - "ASAP:ABE-0004043" - ], - [ - "gene_synonym", - "b1204" - ], - [ - "gene_synonym", - "JW1195" - ], - [ - "gene_synonym", - "asuA?" - ], - [ - "gene_synonym", - "rap" - ], - [ - "gene_synonym", - "ECK1192" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7D1" - ] - ], - "dna_sequence": "GTGACGATTAAATTGATTGTCGGCCTGGCGAACCCCGGTGCTGAATACGCCGCAACGCGACATAATGCTGGTGCCTGGTTCGTTGACTTACTGGCAGAGCGTTTGCGCGCTCCGCTGCGCGAAGAGGCTAAATTCTTTGGTTATACTTCGCGAGTCACTCTTGGAGGCGAAGATGTCCGCCTGTTAGTCCCGACTACATTTATGAATCTCAGCGGCAAAGCCGTTGCGGCGATGGCCAGTTTTTTCCGCATTAATCCGGACGAAATTCTGGTGGCCCACGACGAACTGGATCTGCCTCCTGGCGTCGCCAAATTTAAATTGGGCGGTGGCCATGGTGGTCACAATGGACTGAAAGACATCATCAGTAAATTGGGTAATAACCCTAACTTTCACCGTTTACGCATCGGAATCGGTCATCCGGGCGATAAAAATAAAGTTGTCGGTTTTGTGTTAGGCAAACCGCCTGTTAGTGAACAGAAGTTAATTGATGAAGCCATTGACGAAGCGGCGCGTTGTACTGAAATGTGGTTTACAGATGGCTTGACCAAAGCAACGAACCGATTGCACGCCTTTAAAGCGCAATAA", - "dna_sequence_length": 585, - "functions": [ - "peptidyl-tRNA hydrolase" - ], - "id": "CDS_1185", - "location": [ - [ - "NC_000913", - 1258513, - "-", - 585 - ] - ], - "md5": "f125cd44c2b265e8a6f84b8e59ce19fa", - "parent_gene": "", - "protein_md5": "eba443ca69331a4b5ece478681d63b3a", - "protein_translation": "MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ", - "protein_translation_length": 194, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945762" - ], - [ - "gene_synonym", - "GI:16129168" - ], - [ - "gene_synonym", - "ASAP:ABE-0004049" - ], - [ - "gene_synonym", - "JW1196" - ], - [ - "gene_synonym", - "b1205" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB49" - ], - [ - "gene_synonym", - "EcoGene:EG11533" - ], - [ - "gene_synonym", - "ECK1193" - ], - [ - "gene_synonym", - "ychH" - ], - [ - "gene_synonym", - "NP_415723.1" - ] - ], - "dna_sequence": "ATGAAACGCAAAAACGCTTCGTTACTCGGTAACGTGCTCATGGGGTTGGGTCTGGTGGTAATGGTGGTCGGCGTGGGGTATTCAATCCTCAACCAGTTACCACAGTTTAATATGCCCCAGTATTTCGCACATGGTGCAGTGCTAAGTATTTTCGTCGGTGCCATTCTCTGGCTGGCGGGTGCCCGTGTTGGCGGGCATGAACAGGTGTGCGACCGTTACTGGTGGGTTCGCCACTATGACAAACGTTGCCGCCGTAGCGATAATCGCCGTCATAGCTAA", - "dna_sequence_length": 279, - "functions": [ - "DUF2583 family putative inner membrane protein" - ], - "id": "CDS_1186", - "location": [ - [ - "NC_000913", - 1258791, - "+", - 279 - ] - ], - "md5": "3b07ea92c91f34cb6c051bb3213369dd", - "parent_gene": "", - "protein_md5": "6a0f28f7a21cfc27f20df0b8b89ec6ec", - "protein_translation": "MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAHGAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS", - "protein_translation_length": 92, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5189" - ], - [ - "gene_synonym", - "b1206" - ], - [ - "gene_synonym", - "NP_415724.2" - ], - [ - "gene_synonym", - "GeneID:945770" - ], - [ - "gene_synonym", - "ECK1194" - ], - [ - "gene_synonym", - "dauA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFR2" - ], - [ - "gene_synonym", - "ASAP:ABE-0004051" - ], - [ - "gene_synonym", - "ychM" - ], - [ - "gene_synonym", - "EcoGene:EG12392" - ], - [ - "gene_synonym", - "GI:90111235" - ] - ], - "dna_sequence": "GTGAACAAAATATTTTCCTCACATGTGATGCCTTTCCGCGCTCTGATCGACGCTTGCTGGAAAGAAAAATATACTGCCGCACGGTTTACCCGTGACCTGATTGCCGGGATAACCGTCGGGATTATTGCTATCCCGCTGGCGATGGCGTTGGCTATTGGTAGTGGTGTGGCACCCCAGTACGGTTTATATACCGCAGCTGTTGCGGGGATTGTCATTGCTCTGACGGGTGGGTCACGCTTTAGCGTTTCCGGTCCGACTGCGGCATTTGTGGTAATTCTCTATCCCGTGTCGCAACAGTTTGGACTGGCAGGACTGCTGGTTGCGACCTTGCTGTCGGGGATCTTTTTGATTCTGATGGGTCTGGCACGCTTTGGTCGCCTGATTGAGTATATTCCGGTTTCCGTCACCTTAGGTTTCACCTCGGGTATCGGGATCACCATCGGTACCATGCAGATTAAAGATTTTCTCGGTCTGCAAATGGCCCATGTCCCGGAACATTATCTACAAAAAGTCGGCGCATTATTTATGGCGCTGCCGACCATTAATGTGGGTGATGCTGCCATTGGCATTGTGACGCTAGGTATTCTTGTTTTTTGGCCGCGTCTGGGCATTCGTTTACCCGGTCACCTTCCGGCCTTGCTGGCTGGTTGCGCGGTGATGGGGATTGTTAACCTGCTCGGCGGACATGTTGCTACCATCGGTTCGCAATTCCACTACGTCCTGGCCGATGGTTCTCAGGGTAACGGTATTCCGCAACTGCTGCCGCAACTGGTGCTGCCGTGGGATCTGCCTAATTCAGAATTCACGCTAACCTGGGATTCTATTCGCACACTGCTGCCTGCGGCATTCTCAATGGCAATGCTCGGCGCAATCGAATCTCTGCTCTGCGCCGTGGTGCTGGATGGTATGACCGGGACGAAACACAAGGCGAACAGCGAACTGGTTGGACAGGGACTGGGGAATATTATCGCTCCGTTCTTTGGTGGTATTACCGCTACAGCTGCCATCGCGCGTTCTGCCGCTAACGTCCGTGCCGGGGCAACGTCCCCTATCTCGGCGGTGATCCACTCTATTCTGGTTATTCTTGCCCTGCTGGTACTGGCACCGCTGCTCTCCTGGCTGCCGCTTTCCGCCATGGCAGCCCTGCTGTTGATGGTGGCGTGGAACATGAGTGAAGCGCACAAAGTGGTCGACTTGCTGCGTCATGCGCCGAAAGATGACATCATCGTCATGCTGCTGTGCATGTCGCTGACCGTGTTGTTTGATATGGTTATTGCCATCAGCGTGGGGATCGTGCTGGCATCGCTGCTGTTTATGCGTCGTATCGCACGTATGACTCGCCTGGCACCGGTAGTCGTAGATGTTCCAGACGATGTCCTGGTTCTGCGCGTTATTGGCCCGCTGTTTTTTGCTGCTGCTGAAGGCTTATTCACGGACCTGGAGTCACGTCTTGAAGGCAAACGGATTGTGATTCTGAAGTGGGATGCCGTTCCGGTACTTGATGCTGGTGGTCTTGATGCGTTCCAGCGTTTTGTGAAGCGTCTGCCCGAGGGATGTGAACTGCGCGTGTGCAACGTGGAATTCCAGCCACTGCGCACTATGGCTCGCGCTGGCATTCAACCGATCCCGGGACGCCTGGCGTTCTTCCCGAATCGTCGCGCGGCGATGGCGGATTTATAA", 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- [ - "gene_synonym", - "dnaR" - ], - [ - "gene_synonym", - "EcoGene:EG10774" - ], - [ - "gene_synonym", - "GI:16129170" - ], - [ - "gene_synonym", - "NP_415725.1" - ], - [ - "gene_synonym", - "b1207" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A717" - ], - [ - "gene_synonym", - "ECK1195" - ], - [ - "gene_synonym", - "ASAP:ABE-0004054" - ], - [ - "gene_synonym", - "prs" - ], - [ - "gene_synonym", - "prsA" - ], - [ - "gene_synonym", - "GeneID:945772" - ] - ], - "dna_sequence": "GTGCCTGATATGAAGCTTTTTGCTGGTAACGCCACCCCGGAACTAGCACAACGTATTGCCAACCGCCTGTACACTTCACTCGGCGACGCCGCTGTAGGTCGCTTTAGCGATGGCGAAGTCAGCGTACAAATTAATGAAAATGTACGCGGTGGTGATATTTTCATCATCCAGTCCACTTGTGCCCCTACTAACGACAACCTGATGGAATTAGTCGTTATGGTTGATGCCCTGCGTCGTGCTTCCGCAGGTCGTATCACCGCTGTTATCCCCTACTTTGGCTATGCGCGCCAGGACCGTCGCGTCCGTTCCGCTCGTGTACCAATCACTGCGAAAGTGGTTGCAGACTTCCTCTCCAGCGTCGGTGTTGACCGTGTGCTGACAGTGGATCTGCACGCTGAACAGATTCAGGGTTTCTTCGACGTTCCGGTTGATAACGTATTTGGTAGCCCGATCCTGCTGGAAGACATGCTGCAGCTGAATCTGGATAACCCAATTGTGGTTTCTCCGGACATCGGCGGCGTTGTGCGTGCCCGCGCTATCGCTAAGCTGCTGAACGATACCGATATGGCAATCATCGACAAACGTCGTCCGCGTGCGAACGTTTCACAGGTGATGCATATCATCGGTGACGTTGCAGGTCGTGACTGCGTACTGGTCGATGATATGATCGACACTGGCGGTACGCTGTGTAAAGCTGCTGAAGCTCTGAAAGAACGTGGTGCTAAACGTGTATTTGCGTACGCGACTCACCCGATCTTCTCTGGCAACGCGGCGAACAACCTGCGTAACTCTGTAATTGATGAAGTCGTTGTCTGCGATACCATTCCGCTGAGCGATGAAATCAAATCACTGCCGAACGTGCGTACTCTGACCCTGTCAGGTATGCTGGCCGAAGCGATTCGTCGTATCAGCAACGAAGAATCGATCTCTGCCATGTTCGAACACTAA", - "dna_sequence_length": 948, - "functions": [ - "phosphoribosylpyrophosphate synthase" - ], - "id": "CDS_1188", - "location": [ - [ - "NC_000913", - 1261875, - "-", - 948 - ] - ], - "md5": "1a0db99a8eb6d12df8dbc3ca1d4d0a1e", - "parent_gene": "", - "protein_md5": "e6f72b1a051decd04205145dd9f16f65", - "protein_translation": "MPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLNLDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIPLSDEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMFEH", - "protein_translation_length": 315, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1208" - ], - [ - "gene_synonym", - "JW1199" - ], - [ - "gene_synonym", - "GI:16129171" - ], - [ - "gene_synonym", - "ipk" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P62615" - ], - [ - "gene_synonym", - "ASAP:ABE-0004056" - ], - [ - "gene_synonym", - "EcoGene:EG11294" - ], - [ - "gene_synonym", - "ECK1196" - ], - [ - "gene_synonym", - "ychB" - ], - [ - "gene_synonym", - "GeneID:945774" - ], - [ - "gene_synonym", - "ispE" - ], - [ - "gene_synonym", - "NP_415726.1" - ] - ], - "dna_sequence": "ATGCGGACACAGTGGCCCTCTCCGGCAAAACTTAATCTGTTTTTATACATTACCGGTCAGCGTGCGGATGGTTACCACACGCTGCAAACGCTGTTTCAGTTTCTTGATTACGGCGACACCATCAGCATTGAGCTTCGTGACGATGGGGATATTCGTCTGTTAACGCCCGTTGAAGGCGTGGAACATGAAGATAACCTGATCGTTCGCGCAGCGCGATTGTTGATGAAAACTGCGGCAGACAGCGGGCGTCTTCCGACGGGAAGCGGTGCGAATATCAGCATTGACAAGCGTTTGCCGATGGGCGGCGGTCTCGGCGGTGGTTCATCCAATGCCGCGACGGTCCTGGTGGCATTAAATCATCTCTGGCAATGCGGGCTAAGCATGGATGAGCTGGCGGAAATGGGGCTGACGCTGGGCGCAGATGTTCCTGTCTTTGTTCGGGGGCATGCCGCGTTTGCCGAAGGCGTTGGTGAAATACTAACGCCGGTGGATCCGCCAGAGAAGTGGTATCTGGTGGCGCACCCTGGTGTAAGTATTCCGACTCCGGTGATTTTTAAAGATCCTGAACTCCCGCGCAATACGCCAAAAAGGTCAATAGAAACGTTGCTAAAATGTGAATTCAGCAATGATTGCGAGGTTATCGCAAGAAAACGTTTTCGCGAGGTTGATGCGGTGCTTTCCTGGCTGTTAGAATACGCCCCGTCGCGCCTGACTGGGACAGGGGCCTGTGTCTTTGCTGAATTTGATACAGAGTCTGAAGCCCGCCAGGTGCTAGAGCAAGCCCCGGAATGGCTCAATGGCTTTGTGGCGAAAGGCGCTAATCTTTCCCCATTGCACAGAGCCATGCTTTAA", - "dna_sequence_length": 852, - "functions": [ - "4-diphosphocytidyl-2-C-methylerythritol kinase" - ], - "id": "CDS_1189", - "location": [ - [ - "NC_000913", - 1262877, - "-", - 852 - ] - ], - "md5": "6ba81d44fa9bf58d692a591c59086888", - "parent_gene": "", - "protein_md5": "29dbb1a117a0f251a3ad258fc2b25495", - "protein_translation": "MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGANLSPLHRAML", - "protein_translation_length": 283, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "lolB" - ], - [ - "gene_synonym", - "b1209" - ], - [ - "gene_synonym", - "GI:16129172" - ], - [ - "gene_synonym", - "hemM" - ], - [ - "gene_synonym", - "GeneID:945775" - ], - [ - "gene_synonym", - "JW1200" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P61320" - ], - [ - "gene_synonym", - "ECK1197" - ], - [ - "gene_synonym", - "EcoGene:EG11293" - ], - [ - "gene_synonym", - "ychC" - ], - [ - "gene_synonym", - "NP_415727.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004059" - ] - ], - "dna_sequence": "ATGCCCCTGCCCGATTTTCGTCTTATCCGCCTGCTACCGCTGGCTGCTCTTGTGCTCACTGCCTGTTCCGTTACCACGCCCAAAGGTCCTGGCAAAAGCCCGGATTCGCCACAATGGCGTCAGCATCAGCAAGACGTGCGCAATCTTAATCAGTATCAGACTCGCGGCGCGTTCGCTTATATTTCTGACCAACAAAAAGTGTACGCCCGCTTTTTCTGGCAGCAAACCGGCCAGGATCGCTACCGTCTGCTGCTCACTAACCCATTGGGCAGCACGGAACTGGAGCTGAATGCTCAACCGGGTAACGTGCAGTTAGTCGACAATAAAGGTCAGCGTTATACCGCCGATGACGCCGAAGAGATGATTGGCAAATTGACCGGAATGCCAATTCCGCTCAACAGCTTGCGCCAGTGGATTTTAGGTTTACCGGGTGATGCAACCGACTACAAACTGGACGACCAGTACCGCCTGAGCGAAATTACCTACAGCCAGAATGGCAAAAACTGGAAGGTTGTTTATGGTGGTTATGACACCAAAACGCAACCTGCGATGCCAGCCAATATGGAACTCACCGACGGTGGTCAACGCATCAAGTTAAAAATGGATAACTGGATAGTGAAATAA", - "dna_sequence_length": 624, - "functions": [ - "lipoprotein localization factor" - ], - "id": "CDS_1190", - "location": [ - [ - "NC_000913", - 1263500, - "-", - 624 - ] - ], - "md5": "6ba6cb677a88b1d0c0f8d4b4c755005c", - "parent_gene": "", - "protein_md5": "0ee76a0fad6fa3a5e263937ab7232d9e", - "protein_translation": "MPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQWRQHQQDVRNLNQYQTRGAFAYISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGNVQLVDNKGQRYTADDAEEMIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEITYSQNGKNWKVVYGGYDTKTQPAMPANMELTDGGQRIKLKMDNWIVK", - "protein_translation_length": 207, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1201" - ], - [ - "gene_synonym", - "GI:16129173" - ], - [ - "gene_synonym", - "b1210" - ], - [ - "gene_synonym", - "NP_415728.1" - ], - [ - "gene_synonym", - "hemA" - ], - [ - "gene_synonym", - "EcoGene:EG10427" - ], - [ - "gene_synonym", - "GeneID:945777" - ], - [ - "gene_synonym", - "gtrA" - ], - [ - "gene_synonym", - "ECK1198" - ], - [ - "gene_synonym", - "ASAP:ABE-0004064" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6X1" - ] - ], - "dna_sequence": "ATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATGAAGAAGATCTGCGTAAAAGCCTCTACTGGCATCAGGATAACGACGCGGTTAGCCATTTAATGCGTGTTGCCAGCGGCCTGGATTCACTGGTTCTGGGGGAGCCGCAGATCCTCGGTCAGGTTAAAAAAGCGTTTGCCGATTCGCAAAAAGGTCATATGAAGGCCAGCGAACTGGAACGCATGTTCCAGAAATCTTTCTCTGTCGCGAAACGCGTTCGCACTGAAACAGATATCGGTGCCAGCGCTGTGTCTGTCGCTTTTGCGGCTTGTACGCTGGCGCGGCAGATCTTTGAATCGCTCTCTACGGTCACAGTGTTGCTGGTAGGCGCGGGCGAAACTATCGAGCTGGTGGCGCGTCATCTGCGCGAACACAAAGTACAGAAGATGATTATCGCCAACCGCACTCGCGAACGTGCCCAAATTCTGGCAGATGAAGTCGGCGCGGAAGTGATTGCCCTGAGTGATATCGACGAACGTCTGCGCGAAGCCGATATCATCATCAGTTCCACCGCCAGCCCGTTACCGATTATCGGGAAAGGCATGGTGGAGCGCGCATTAAAAAGCCGTCGCAACCAACCAATGCTGTTGGTGGATATTGCCGTTCCGCGCGATGTTGAGCCGGAAGTTGGCAAACTGGCGAATGCTTATCTTTATAGCGTTGATGATCTGCAAAGCATCATTTCGCACAACCTGGCGCAGCGTAAAGCCGCAGCGGTTGAGGCGGAAACTATTGTCGCTCAGGAAACCAGCGAATTTATGGCGTGGCTGCGAGCACAAAGCGCCAGCGAAACCATTCGCGAGTATCGCAGCCAGGCAGAGCAAGTTCGCGATGAGTTAACCGCCAAAGCGTTAGCGGCCCTTGAGCAGGGCGGCGACGCGCAAGCCATTATGCAGGATCTGGCATGGAAACTGACTAACCGCTTGATCCATGCGCCAACGAAATCACTTCAACAGGCCGCCCGTGACGGGGATAACGAACGCCTGAATATTCTGCGCGACAGCCTCGGGCTGGAGTAG", - "dna_sequence_length": 1257, - "functions": [ - "glutamyl tRNA reductase" - ], - "id": "CDS_1191", - "location": [ - [ - "NC_000913", - 1263714, - "+", - 1257 - ] - ], - "md5": "0f18218b4a84f46b9c206ed1bf724524", - "parent_gene": "", - "protein_md5": "3cf93802fe5816e9d12b939a19da52dd", - "protein_translation": "MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGGVVLSTCNRTELYLSVEEQDNLQEALIRWLCDYHNLNEEDLRKSLYWHQDNDAVSHLMRVASGLDSLVLGEPQILGQVKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGASAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEVGAEVIALSDIDERLREADIIISSTASPLPIIGKGMVERALKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAWLRAQSASETIREYRSQAEQVRDELTAKALAALEQGGDAQAIMQDLAWKLTNRLIHAPTKSLQQAARDGDNERLNILRDSLGLE", - "protein_translation_length": 418, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ups?" - ], - [ - "gene_synonym", - "GI:16129174" - ], - [ - "gene_synonym", - "EcoGene:EG10761" - ], - [ - "gene_synonym", - "prfA" - ], - [ - "gene_synonym", - "b1211" - ], - [ - "gene_synonym", - "ASAP:ABE-0004066" - ], - [ - "gene_synonym", - "uar" - ], - [ - "gene_synonym", - "JW1202" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7I0" - ], - [ - "gene_synonym", - "NP_415729.1" - ], - [ - "gene_synonym", - "GeneID:949002" - ], - [ - "gene_synonym", - "ECK1199" - ], - [ - "gene_synonym", - "sueB" - ] - ], - "dna_sequence": "ATGAAGCCTTCTATCGTTGCCAAACTGGAAGCCCTGCATGAACGCCATGAAGAAGTTCAGGCGTTGCTGGGTGACGCGCAAACTATCGCCGACCAGGAACGTTTTCGCGCATTATCACGCGAATATGCGCAGTTAAGTGATGTTTCGCGCTGTTTTACCGACTGGCAACAGGTTCAGGAAGATATCGAAACCGCACAGATGATGCTCGATGATCCTGAAATGCGTGAGATGGCGCAGGATGAACTGCGCGAAGCTAAAGAAAAAAGCGAGCAACTGGAACAGCAATTACAGGTTCTGTTACTGCCAAAAGATCCTGATGACGAACGTAACGCCTTCCTCGAAGTCCGAGCCGGAACCGGCGGCGACGAAGCGGCGCTGTTCGCGGGCGATCTGTTCCGTATGTACAGCCGTTATGCCGAAGCCCGCCGCTGGCGGGTAGAAATCATGAGCGCCAGCGAGGGTGAACATGGTGGTTATAAAGAGATCATCGCCAAAATTAGCGGTGATGGTGTGTATGGTCGTCTGAAATTTGAATCCGGCGGTCATCGCGTGCAACGTGTTCCTGCTACGGAATCGCAGGGTCGTATTCATACTTCTGCTTGTACCGTTGCGGTAATGCCAGAACTGCCTGACGCAGAACTGCCGGACATCAACCCAGCAGATTTACGCATTGATACTTTCCGCTCGTCAGGGGCGGGTGGTCAGCACGTTAACACCACCGATTCGGCAATTCGTATTACTCACTTGCCGACCGGGATTGTTGTTGAATGTCAGGACGAACGTTCACAACATAAAAACAAAGCTAAAGCACTTTCTGTTCTCGGTGCTCGCATCCACGCTGCTGAAATGGCAAAACGCCAACAGGCCGAAGCGTCTACCCGTCGTAACCTGCTGGGGAGTGGCGATCGCAGCGACCGTAACCGTACTTACAACTTCCCGCAGGGGCGCGTTACCGATCACCGCATCAACCTGACGCTCTACCGCCTGGATGAAGTGATGGAAGGTAAGCTGGATATGCTGATTGAACCGATTATCCAGGAACATCAGGCCGACCAACTGGCGGCGTTGTCCGAGCAGGAATAA", - "dna_sequence_length": 1083, - "functions": [ - "peptide chain release factor RF-1" - ], - "id": "CDS_1192", - "location": [ - [ - "NC_000913", - 1265012, - "+", - 1083 - ] - ], - "md5": "0d3698bfb7825dfd5b08c5666a7a1013", - "parent_gene": "", - "protein_md5": "ebe0a3fcfb3e5d36ef27b7a5954b597f", - "protein_translation": "MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSEQE", - "protein_translation_length": 360, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hemK" - ], - [ - "gene_synonym", - "GI:16129175" - ], - [ - "gene_synonym", - "GeneID:945779" - ], - [ - "gene_synonym", - "prmC" - ], - [ - "gene_synonym", - "EcoGene:EG12424" - ], - [ - "gene_synonym", - "JW1203" - ], - [ - "gene_synonym", - "b1212" - ], - [ - "gene_synonym", - "ECK1200" - ], - [ - "gene_synonym", - "ASAP:ABE-0004068" - ], - [ - "gene_synonym", - "NP_415730.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACC1" - ] - ], - "dna_sequence": "ATGGAATATCAACACTGGTTACGTGAAGCAATAAGCCAACTTCAGGCGAGCGAAAGCCCGCGGCGTGATGCTGAAATCCTGCTGGAGCATGTTACCGGCAGAGGGCGTACTTTTATTCTCGCCTTTGGTGAAACGCAGCTGACTGACGAACAATGTCAGCAACTTGATGCGCTACTGACACGTCGTCGCGATGGTGAACCCATTGCTCATTTAACCGGGGTGCGAGAATTCTGGTCGTTGCCGTTATTTGTTTCGCCAGCGACCTTAATTCCGCGCCCGGATACGGAGTGTCTGGTGGAGCAGGCACTGGCGCGGTTGCCTGAACAACCTTGCCGTATTCTCGATCTCGGGACGGGTACCGGGGCGATTGCGCTTGCGCTGGCTAGCGAGCGCCCGGACTGCGAAATTATCGCTGTAGATCGTATGCCTGATGCTGTCTCCCTGGCACAACGTAATGCCCAGCATCTGGCGATCAAAAATATCCACATTCTGCAAAGCGACTGGTTTAGCGCGCTAGCCGGGCAGCAGTTTGCGATGATTGTCAGCAATCCGCCGTATATTGACGAGCAGGACCCTCATCTTCAACAAGGCGATGTCCGCTTTGAGCCGCTCACTGCGCTGGTTGCGGCAGACAGTGGAATGGCAGACATCGTGCATATCATCGAACAGTCGCGTAACGCGCTGGTATCCGGCGGCTTTCTGCTTCTGGAACATGGCTGGCAGCAGGGCGAAGCGGTGCGACAAGCATTTATCCTCGCGGGGTATCATGACGTCGAAACCTGCCGTGACTATGGTGATAACGAGCGCGTAACGCTCGGCCGCTATTATCAATGA", - "dna_sequence_length": 834, - "functions": [ - "RF-1 and RF-2 N5-glutamine methyltransferase" - ], - "id": "CDS_1193", - "location": [ - [ - "NC_000913", - 1266094, - "+", - 834 - ] - ], - "md5": "a4307931c4b1b30c487364a3be36a585", - "parent_gene": "", - "protein_md5": "25069df14c958fde0c20e5dc3612aed3", - "protein_translation": "MEYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRYYQ", - "protein_translation_length": 277, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129176" - ], - [ - "gene_synonym", - "GeneID:945781" - ], - [ - "gene_synonym", - "EcoGene:EG14293" - ], - [ - "gene_synonym", - "ychQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0004071" - ], - [ - "gene_synonym", - "b1213" - ], - [ - "gene_synonym", - "JW1204" - ], - [ - "gene_synonym", - "ECK1201" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46755" - ], - [ - "gene_synonym", - "sirB2" - ], - [ - "gene_synonym", - "NP_415731.1" - ] - ], - "dna_sequence": "ATGACAAGTTTTTCTACACTGCTTAGTGTTCATCTTATTAGTATCGCGCTTTCTGTTGGGCTATTAACCTTACGTTTCTGGCTACGTTATCAGAAGCATCCACAGGCATTTGCTCGCTGGACGCGCATTGTGCCGCCGGTTGTCGATACGCTGTTACTGTTAAGCGGCATTGCGTTGATGGCTAAAGCGCACATCCTGCCATTTTCCGGGCAGGCACAGTGGCTGACTGAAAAGCTGTTTGGAGTTATCATTTATATCGTTTTGGGTTTTATTGCACTCGATTATCGTCGTATGCACAGTCAGCAGGCGCGCATTATTGCCTTCCCGCTGGCGTTGGTGGTGCTGTACATCATCATTAAACTCGCCACCACAAAAGTACCGTTACTGGGGTAA", - "dna_sequence_length": 393, - "functions": [ - "SIRB family inner membrane protein" - ], - "id": "CDS_1194", - "location": [ - [ - "NC_000913", - 1266924, - "+", - 393 - ] - ], - "md5": "f3b235bcb7149feff7316d197829a638", - "parent_gene": "", - "protein_md5": "01594cfc8ebd1478000babc7e0515264", - "protein_translation": "MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIVPPVVDTLLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQARIIAFPLALVVLYIIIKLATTKVPLLG", - "protein_translation_length": 130, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11251" - ], - [ - "gene_synonym", - "GI:16129177" - ], - [ - "gene_synonym", - "GeneID:945784" - ], - [ - "gene_synonym", - "NP_415732.1" - ], - [ - "gene_synonym", - "b1214" - ], - [ - "gene_synonym", - "JW1205" - ], - [ - "gene_synonym", - "ECK1202" - ], - [ - "gene_synonym", - "ychA" - ], - [ - "gene_synonym", - "sirB1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004074" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGM5" - ] - ], - "dna_sequence": "ATGAGATCGTTAGCTGATTTCGAATTTAATAAAGCGCCATTGTGCGAAGGCATGATCCTGGCTTGCGAAGCAATCCGCCGCGATTTTCCCTCGCAAGATGTTTACGACGAACTGGAGCGTCTCGTTAGTCTGGCGAAGGAAGAAATCAGCCAGCTTCTGCCTTTAGAAGAGCAGTTGGAAAAACTGATCGCGCTGTTTTACGGCGACTGGGGATTTAAAGCCTCACGCGGTGTTTATCGTCTTTCCGATGCATTATGGCTGGACCAGGTGTTAAAGAATCGACAGGGCAGTGCGGTATCATTAGGTGCGGTTTTATTATGGGTCGCGAATCGTCTCGATTTGCCGCTGCTGCCGGTGATTTTCCCTACGCAGCTGATATTGCGCATTGAATGTCCGGATGGCGAAATTTGGCTGATTAATCCTTTTAACGGTGAATCGTTAAGCGAACATATGCTGGACGTATGGTTAAAGGGAAATATCAGCCCGTCGGCGGAACTGTTTTATGAAGACCTTGATGAAGCTGATAACATTGAGGTAATCCGCAAATTGCTGGATACACTCAAAGCCTCGTTGATGGAAGAAAATCAGATGGAGCTGGCGTTACGCACCAGCGAAGCTTTATTACAATTCAACCCTGAAGATCCCTATGAAATTCGCGATCGCGGGTTGATTTATGCGCAACTGGATTGCGAACACGTTGCGTTGAACGATTTAAGTTATTTCGTTGAACAGTGTCCGGAAGACCCGATCAGCGAAATGATCCGTGCGCAAATAAATAACATCGCGCATAAACATATTGTGCTGCATTAA", - "dna_sequence_length": 810, - "functions": [ - "transglutaminase-like TPR-repeat protein" - ], - "id": "CDS_1195", - "location": [ - [ - "NC_000913", - 1267320, - "+", - 810 - ] - ], - "md5": "6c98207108f2afc5723f13f721d32f5e", - "parent_gene": "", - "protein_md5": "391ba96281ac0e1a17c55f5bfdac2884", - "protein_translation": "MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSLAKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLGAVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNISPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEIRDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKHIVLH", - "protein_translation_length": 269, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945785" - ], - [ - "gene_synonym", - "JW1206" - ], - [ - "gene_synonym", - "EcoGene:EG10518" - ], - [ - "gene_synonym", - "b1215" - ], - [ - "gene_synonym", - "GI:16129178" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A715" - ], - [ - "gene_synonym", - "kdsA" - ], - [ - "gene_synonym", - "ECK1203" - ], - [ - "gene_synonym", - "NP_415733.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004077" - ] - ], - "dna_sequence": "ATGAAACAAAAAGTGGTTAGCATTGGCGACATCAACGTAGCAAATGACCTGCCGTTCGTACTGTTTGGCGGTATGAACGTGTTGGAATCTCGCGATCTGGCGATGCGCATTTGCGAGCACTACGTAACTGTGACCCAGAAACTGGGTATCCCTTACGTGTTCAAAGCCTCTTTTGACAAAGCCAACCGCTCCTCCATCCACTCTTATCGTGGACCGGGCCTGGAAGAAGGGATGAAAATCTTCCAGGAGTTGAAGCAGACTTTTGGCGTGAAAATTATCACCGACGTTCACGAACCAAGTCAGGCACAGCCCGTTGCTGATGTCGTGGATGTGATTCAGTTGCCGGCGTTTCTTGCTCGCCAGACTGACCTGGTTGAAGCCATGGCGAAAACCGGTGCGGTAATTAACGTCAAGAAACCACAGTTTGTCAGCCCGGGACAGATGGGTAATATCGTTGATAAATTCAAAGAAGGCGGCAACGAAAAAGTGATTCTTTGCGATCGCGGTGCTAACTTCGGCTATGACAACCTGGTTGTCGATATGCTGGGCTTCAGCATTATGAAGAAAGTGTCTGGTAACTCGCCGGTGATTTTCGACGTGACCCACGCACTGCAATGCCGCGATCCGTTTGGCGCAGCTTCCGGTGGTCGTCGTGCTCAGGTGGCTGAGCTGGCACGAGCCGGTATGGCGGTAGGTCTGGCGGGGCTGTTTATTGAAGCGCATCCGGATCCGGAACATGCGAAATGTGATGGTCCATCCGCGCTGCCGCTGGCTAAACTGGAACCGTTCCTCAAGCAGATGAAAGCGATTGATGATCTGGTGAAAGGTTTCGAAGAACTGGATACCAGCAAGTAA", - "dna_sequence_length": 855, - "functions": [ - "3-deoxy-D-manno-octulosonate 8-phosphate synthase" - ], - "id": "CDS_1196", - "location": [ - [ - "NC_000913", - 1268165, - "+", - 855 - ] - ], - "md5": "b16d1466897d482d5f181be3ac4c84a4", - "parent_gene": "", - "protein_md5": "d63d61068f94d5289d7c8b5c6079f26a", - "protein_translation": "MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQAQPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNEKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGLAGLFIEAHPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKGFEELDTSK", - "protein_translation_length": 284, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14403" - ], - [ - "gene_synonym", - "YP_025297.1" - ], - [ - "gene_synonym", - "GeneID:2847733" - ], - [ - "gene_synonym", - "ldrA" - ], - [ - "gene_synonym", - "ECK1204" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q6BF86" - ], - [ - "gene_synonym", - "ASAP:ABE-0047280" - ], - [ - "gene_synonym", - "b4419" - ], - [ - "gene_synonym", - "GI:49176087" - ], - [ - "gene_synonym", - "JW5957" - ] - ], 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"dna_sequence": "ATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAATTATTACCGCAGCGATTGTCGGCTGGTGGCGTAACCGGAAGTAA", - "dna_sequence_length": 108, - "functions": [ - "toxic polypeptide, small" - ], - "id": "CDS_1198", - "location": [ - [ - "NC_000913", - 1269810, - "-", - 108 - ] - ], - "md5": "7d84efc139edf182a92839eda4f41a8f", - "parent_gene": "", - "protein_md5": "e71043910d3a7c4ccae05d7eb9a4ca5c", - "protein_translation": "MTLAQFAMTFWHDLAAPILAGIITAAIVGWWRNRK", - "protein_translation_length": 35, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14405" - ], - [ - "gene_synonym", - "b4423" - ], - [ - "gene_synonym", - "YP_025299.1" - ], - [ - "gene_synonym", - "GeneID:2847775" - ], - [ - "gene_synonym", - "ldrC" - ], - [ - "gene_synonym", - "GI:49176089" - ], - [ - "gene_synonym", - "ASAP:ABE-0047282" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q6BF86" - ], - [ - "gene_synonym", - "ECK1208" - ], - [ - "gene_synonym", - "JW5959" - ] - ], - "dna_sequence": "ATGACGCTCGCGCAGTTTGCCATGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTATTACCGCAGCGATTGTCAGCTGGTGGCGTAACCGGAAGTAA", - "dna_sequence_length": 108, - "functions": [ - "toxic polypeptide, small" - ], - "id": "CDS_1199", - "location": [ - [ - "NC_000913", - 1270345, - "-", - 108 - ] - ], - "md5": "3098e0e932260cdd51ba0acc5f9f5497", - "parent_gene": "", - "protein_md5": "0dc3e987eab4546d4cc5b2c564a7e27f", - "protein_translation": "MTLAQFAMIFWHDLAAPILAGIITAAIVSWWRNRK", - "protein_translation_length": 35, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "chaA" - ], - [ - "gene_synonym", - "GeneID:945790" - ], - [ - "gene_synonym", - "JW1207" - ], - [ - "gene_synonym", - "GI:16129179" - ], - [ - "gene_synonym", - "EcoGene:EG11753" - ], - [ - "gene_synonym", - "ASAP:ABE-0004082" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31801" - ], - [ - "gene_synonym", - "b1216" - ], - [ - "gene_synonym", - "NP_415734.1" - ], - [ - "gene_synonym", - "ECK1210" - ] - ], - "dna_sequence": "ATGTCAAATGCTCAAGAGGCGGTAAAAACCCGCCACAAGGAGACTTCGCTTATTTTCCCGGTTCTGGCGCTGGTAGTGCTGTTCCTGTGGGGAAGCAGCCAGACACTACCAGTGGTCATTGCCATCAATCTTCTTGCGCTTATTGGTATTTTAAGTAGCGCCTTTAGTGTTGTCCGTCATGCGGACGTATTAGCCCATCGCCTGGGAGAACCTTACGGTTCGCTTATTCTTAGCCTTTCAGTGGTTATTCTTGAAGTCAGTTTGATTTCAGCTTTAATGGCAACCGGCGACGCCGCGCCAACGCTAATGCGTGATACGCTCTATTCAATCATTATGATTGTTACCGGTGGGCTGGTTGGCTTTTCATTATTGTTGGGCGGTCGTAAGTTTGCCACCCAATATATGAATCTGTTTGGTATCAAGCAGTATTTAATTGCGCTGTTCCCCCTGGCGATAATCGTACTGGTATTTCCAATGGCTCTGCCTGCGGCGAATTTTTCAACCGGTCAGGCGTTACTGGTAGCATTAATTTCTGCGGCAATGTATGGCGTATTTTTGCTGATCCAGACCAAAACGCATCAAAGTTTGTTTGTCTACGAGCACGAAGATGACAGTGATGATGACGACCCGCATCACGGTAAACCGTCTGCCCATAGCAGCCTGTGGCATGCTATCTGGTTGATTATCCATCTGATTGCCGTTATTGCGGTGACCAAAATGAACGCCAGCTCGCTGGAGACATTGCTCGACAGCATGAATGCCCCTGTCGCCTTTACTGGCTTCCTGGTGGCACTGTTGATTCTGTCGCCGGAAGGTTTAGGTGCATTAAAAGCAGTGTTGAACAACCAGGTTCAGCGCGCGATGAATCTGTTCTTTGGTTCAGTGTTAGCAACCATTTCGCTTACCGTACCTGTCGTCACGCTAATTGCCTTTATGACGGGTAACGAATTGCAGTTTGCACTTGGTGCGCCAGAAATGGTGGTGATGGTGGCCTCTTTAGTGCTGTGCCATATCTCCTTCTCCACCGGACGTACTAACGTGCTCAATGGCGCAGCGCATCTGGCACTGTTTGCCGCCTATTTGATGACGATATTTGCCTGA", 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- "b1217" - ], - [ - "gene_synonym", - "NP_415735.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004087" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE63" - ], - [ - "gene_synonym", - "ECK1211" - ] - ], - "dna_sequence": "ATGCCGTATAAAACGAAAAGCGATCTGCCGGAAAGCGTAAAGCACGTTCTACCGTCTCATGCCCAGGATATCTATAAAGAAGCGTTCAACAGCGCATGGGATCAATATAAAGATAAAGAAGATCGGCGTGATGACGCCAGTCGCGAAGAAACCGCGCATAAAGTGGCCTGGGCTGCTGTGAAGCATGAATATGCCAAAGGGGATGATGATAAATGGCATAAAAAATCGTAA", - "dna_sequence_length": 231, - "functions": [ - "cation transport regulator" - ], - "id": "CDS_1201", - "location": [ - [ - "NC_000913", - 1272119, - "+", - 231 - ] - ], - "md5": "5c060d9cd792bb8e0c4916d72b1695f5", - "parent_gene": "", - "protein_md5": "04a2ee16744fe2b52290f8ce9c2ab392", - "protein_translation": "MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKEDRRDDASREETAHKVAWAAVKHEYAKGDDDKWHKKS", - "protein_translation_length": 76, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "chaC" - ], - [ - "gene_synonym", - "JW1209" - ], - [ - "gene_synonym", - "GeneID:945793" - ], - [ - "gene_synonym", - "EcoGene:EG12403" - ], - [ - "gene_synonym", - "b1218" - ], - [ - "gene_synonym", - "GI:145698247" - ], - [ - "gene_synonym", - "NP_415736.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39163" - ], - [ - "gene_synonym", - "ASAP:ABE-0004089" - ], - [ - "gene_synonym", - "ECK1212" - ] - ], - "dna_sequence": "GTGATAACGCGTGATTTCTTGATGAATGCCGATTGTAAAACGGCATTTGGTGCCATTGAAGAATCACTCTTATGGTCAGCAGAACAACGGGCGGCTTCGCTGGCGGCGACGCTGGCTTGTCGACCTGATGAGGGACCGGTGTGGATCTTCGGCTATGGATCGTTGATGTGGAATCCGGCACTGGAGTTTACCGAATCGTGCACCGGTACACTGGTTGGATGGCATCGCGCATTTTGCCTGCGCCTGACCGCCGGGCGCGGGACTGCGCACCAGCCGGGACGGATGCTTGCACTGAAAGAGGGCGGACGCACCACAGGCGTCGCCTATCGACTGCCAGAAGAGACGCTGGAGCAGGAACTAACCCTGTTGTGGAAGCGAGAGATGATTACCGGCTGTTATCTGCCAACCTGGTGTCAGCTTGATCTTGATGATGGACGCACAGTAAACGCCATTGTGTTTATTATGGACCCGCGACATCCAGAATATGAATCTGATACTCGCGCTCAGGTCATCGCGCCGTTGATTGCGGCGGCGAGCGGTCCGCTGGGAACCAACGCACAATACCTGTTTTCACTGGAACAGGAGCTTATCAAACTGGGAATGCAGGACGATGGGCTGAATGATTTGCTGGTATCGGTAAAAAAACTGCTGGCGGAGAATTTTCCGGATGGTGTGTTACGTCCGGGATTCGCCTGA", - "dna_sequence_length": 696, - "functions": [ - "cation transport regulator" - ], - "id": "CDS_1202", - "location": [ - [ - "NC_000913", - 1272507, - "+", - 696 - ] - ], - "md5": "798de283ca49b8cec72f92da64fac4c7", - "parent_gene": "", - "protein_md5": "7afc5e8c1f234a52431f4c53d61020c8", - "protein_translation": "MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDEGPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGGRTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGRTVNAIVFIMDPRHPEYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLAENFPDGVLRPGFA", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1219" - ], - [ - "gene_synonym", - "NP_415737.1" - ], - [ - "gene_synonym", - "GeneID:945794" - ], - [ - "gene_synonym", - "JW1210" - ], - [ - "gene_synonym", - "EcoGene:EG12404" - ], - [ - "gene_synonym", - "ASAP:ABE-0004091" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB52" - ], - [ - "gene_synonym", - "GI:16129182" - ], - [ - "gene_synonym", - "ychN" - ], - [ - "gene_synonym", - "ECK1213" - ] - ], - "dna_sequence": "ATGCAAAAAATCGTGATCGTTGCCAATGGCGCACCTTACGGGAGCGAATCCTTGTTTAACAGCTTGCGGCTGGCCATTGCGTTACGAGAGCAGGAGAGCAATCTGGATCTGCGTCTGTTCCTCATGTCTGATGCGGTCACAGCCGGGTTGCGCGGGCAAAAACCAGGGGAAGGCTACAACATTCAGCAAATGCTGGAGATCCTTACCGCTCAGAATGTACCGGTGAAATTGTGCAAAACCTGTACCGACGGGCGCGGGATTAGTACACTTCCTCTGATTGATGGGGTGGAAATCGGTACTCTTGTGGAACTGGCGCAATGGACGCTGTCAGCCGATAAAGTGCTCACATTTTAA", - "dna_sequence_length": 354, - "functions": [ - "putative sulfur relay protein" - ], - "id": "CDS_1203", - "location": [ - [ - "NC_000913", - 1273599, - "-", - 354 - ] - ], - "md5": "be44588bff89a918e7676719705297d3", - "parent_gene": "", - "protein_md5": "e76d2cf421d530036f7632cf4ec6ba0d", - "protein_translation": "MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLVELAQWTLSADKVLTF", - "protein_translation_length": 117, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415738.2" - ], - [ - "gene_synonym", - "EcoGene:EG12405" - ], - [ - "gene_synonym", - "ychP" - ], - [ - "gene_synonym", - "JW1211" - ], - [ - "gene_synonym", - "b1220" - ], - [ - "gene_synonym", - "GI:145698248" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39165" - ], - [ - "gene_synonym", - "ASAP:ABE-0004095" - ], - [ - "gene_synonym", - "ECK1214" - ], - [ - "gene_synonym", - "ychO" - ], - [ - "gene_synonym", - "GeneID:945801" - ] - ], - "dna_sequence": "TTGAGCCGTTTCGTTCCTCGCATTATCCCGTTTTATTTACTCTTGCTTGTAGCAGGCGGTACAGCTAACGCACAATCTACCTTCGAGCAAAAAGCGGCAAATCCCTTTGATAATAACAATGATGGTCTGCCGGATTTAGGCATGGCTCCCGAAAATCATGATGGGGAAAAACACTTTGCTGAAATTGTGAAAGATTTCGGCGAAACCAGTATGAATGATAACGGGCTGGATACTGGCGAGCAGGCAAAAGCTTTCGCATTGGGAAAAGTCCGCGACGCGCTTAGTCAACAGGTTAATCAGCACGTAGAGTCCTGGCTATCACCGTGGGGAAATGCCAGTGTTGACGTCAAAGTGGATAACGAAGGACATTTCACCGGCAGTCGTGGAAGCTGGTTTGTGCCGTTACAAGATAATGATCGTTATCTCACCTGGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGAGCAATGTGGGCGTTGGGCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTATAACACTTTTTATGACAACTTGCTGGACGAAAATCTTCAGCGAGCGGGCTTTGGTGCCGAAGCGTGGGGCGAATATTTGCGATTATCGGCAAACTTTTATCAGCCGTTTGCTGCATGGCATGAACAGACAGCCACGCAGGAACAACGGATGGCGCGCGGGTACGACCTGACAGCTCGGATGCGCATGCCGTTCTATCAACACCTCAATACCAGTGTCAGCCTAGAACAGTATTTTGGTGATCGTGTTGATTTGTTTAACTCTGGTACGGGTTATCACAATCCCGTCGCGTTGAGTCTGGGATTAAATTACACCCCTGTGCCATTAGTCACTGTGACGGCCCAGCATAAACAGGGTGAAAGTGGCGAAAATCAAAATAACCTCGGGCTGAATCTTAATTACCGCTTTGGTGTACCGCTCAAAAAACAACTTTCTGCGGGCGAGGTTGCCGAAAGTCAGTCGTTACGTGGTAGTCGCTATGACAATCCGCAGCGAAATAATCTACCGACTCTTGAGTACCGACAGCGAAAAACGTTAACGGTGTTTCTGGCGACACCGCCGTGGGATCTAAAACCTGGCGAAACAGTGCCGCTGAAATTACAAATCCGCAGTCGTTACGGTATTCGGCAACTGATTTGGCAGGGCGATACGCAGATATTAAGTTTGACGCCGGGCGCACAAGCCAACAGCGCGGAGGGCTGGACGCTGATCATGCCTGACTGGCAGAACGGGGAAGGGGCAAGCAATCACTGGCGATTGTCTGTGGTGGTGGAAGATAACCAGGGGCAGCGTGTCTCCTCCAATGAGATCACGCTAACGCTTGTCGAACCGTTCGATGCATTGTCAAACGACGAACTGCGCTGGGAACCGTAA", 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"gene_synonym", - "b1221" - ], - [ - "gene_synonym", - "JW1212" - ], - [ - "gene_synonym", - "GI:16129184" - ], - [ - "gene_synonym", - "narL" - ], - [ - "gene_synonym", - "ASAP:ABE-0004097" - ], - [ - "gene_synonym", - "frdR" - ], - [ - "gene_synonym", - "ECK1215" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF28" - ] - ], - "dna_sequence": "ATGAGTAATCAGGAACCGGCTACTATCCTGCTGATTGACGATCACCCGATGCTGCGAACTGGCGTAAAACAGCTTATCAGTATGGCACCAGATATCACCGTGGTTGGCGAAGCGAGTAATGGCGAACAGGGTATTGAACTGGCGGAGTCTCTTGATCCCGATCTGATCCTGTTAGATCTCAATATGCCCGGCATGAACGGTCTGGAAACGCTGGATAAACTGCGCGAAAAGTCCCTCTCAGGGCGCATTGTGGTATTCAGCGTCTCTAACCATGAAGAAGATGTGGTCACCGCACTGAAACGCGGCGCGGATGGCTATCTGTTAAAAGATATGGAACCGGAAGATCTGCTGAAAGCATTGCATCAGGCAGCTGCTGGCGAAATGGTATTAAGCGAAGCATTAACGCCTGTTCTGGCCGCCAGCTTGCGCGCTAACCGTGCCACTACTGAGCGCGATGTTAACCAGTTAACCCCACGCGAGCGCGATATTCTCAAGCTGATTGCCCAGGGTTTGCCGAACAAGATGATTGCCCGCCGCCTGGATATCACCGAAAGCACAGTAAAAGTGCACGTCAAGCACATGCTGAAGAAAATGAAGCTCAAGTCTCGCGTGGAAGCAGCGGTATGGGTGCATCAGGAGCGCATTTTCTGA", - "dna_sequence_length": 651, - "functions": [ - "response regulator in two-component regulatory system with NarX" - ], - "id": "CDS_1205", - "location": [ - [ - "NC_000913", - 1275829, - "-", - 651 - ] - ], - "md5": "11d854ea4133f2ace19ea6fb6275d369", - "parent_gene": "", - "protein_md5": "8f80a9379e52023221a7cf06252eb4cc", - "protein_translation": "MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF", - "protein_translation_length": 216, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415740.1" - ], - [ - "gene_synonym", - "EcoGene:EG10646" - ], - [ - "gene_synonym", - "narX" - ], - [ - "gene_synonym", - "GeneID:945788" - ], - [ - "gene_synonym", - "JW1213" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFA2" - ], - [ - "gene_synonym", - "GI:16129185" - ], - [ - "gene_synonym", - "narR" - ], - [ - "gene_synonym", - "b1222" - ], - [ - "gene_synonym", - "ECK1216" - ], - [ - "gene_synonym", - "frdR" - ], - [ - "gene_synonym", - "ASAP:ABE-0004099" - ] - ], - "dna_sequence": "ATGCTTAAACGTTGTCTCTCTCCGCTCACCCTGGTTAATCAGGTTGCGCTTATTGTGTTGCTTTCTACTGCTATTGGACTGGCAGGGATGGCGGTTTCTGGCTGGCTGGTGCAAGGCGTTCAGGGCAGCGCCCATGCGATCAACAAAGCGGGATCGCTGCGCATGCAAAGTTACCGTCTGTTGGCGGCAGTGCCATTAAGCGAGAAAGACAAGCCCTTAATTAAAGAGATGGAACAAACGGCATTTAGCGCCGAGTTGACTCGAGCAGCAGAACGAGACGGACAACTGGCGCAATTACAGGGTTTACAAGATTACTGGCGTAATGAACTGATCCCTGCGCTGATGCGTGCACAAAACCGAGAAACGGTGTCAGCGGATGTCAGCCAGTTTGTTGCCGGGCTTGATCAACTGGTATCTGGTTTTGACCGCACCACGGAAATGCGCATCGAGACAGTGGTACTGGTCCATCGGGTAATGGCGGTATTTATGGCACTTTTACTGGTGTTCACTATTATCTGGTTGCGGGCGCGACTGCTACAACCGTGGCGGCAACTGCTGGCAATGGCGAGTGCCGTCAGTCATCGCGATTTTACCCAACGCGCAAACATCAGCGGGCGCAACGAAATGGCGATGCTTGGAACTGCGTTGAACAATATGTCTGCAGAACTGGCCGAAAGTTATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAACCCTGCTACGTGATATCGAATTGCGGGTGTATGACACTGATGATGAAGAGAATCATCAGGAGTTTACCTGCCAGCCAGATATGACTTGTGATGATAAAGGCTGCCAGCTCTGCCCGCGCGGCGTATTACCCGTTGGTGATCGCGGCACGACCCTGAAGTGGCGGCTGGCTGACTCTCATACGCAGTACGGTATTTTGCTGGCGACCCTGCCGCAGGGGCGTCATCTTAGCCATGATCAACAACAACTGGTGGATACCCTGGTTGAACAACTCACCGCCACGCTGGCGCTGGATCGCCATCAGGAACGTCAGCAACAGTTGATCGTGATGGAAGAGCGTGCCACCATTGCGCGCGAACTGCATGATTCTATTGCCCAATCTCTCTCTTGCATGAAGATGCAGGTGAGTTGTTTACAGATGCAGGGCGATGCGCTGCCAGAAAGCAGCCGCGAACTGTTAAGTCAGATCCGTAACGAACTGAATGCATCCTGGGCGCAGTTGCGTGAATTGCTCACCACATTCCGCTTGCAGCTCACCGAGCCTGGATTACGTCCGGCGCTGGAGGCGAGTTGCGAAGAGTACAGCGCCAAATTTGGCTTCCCGGTGAAGCTGGATTATCAATTGCCGCCTCGCCTGGTGCCTTCGCATCAGGCAATCCACTTGTTGCAAATTGCCCGTGAGGCATTAAGTAACGCCCTCAAACATTCGCAAGCGAGTGAAGTCGTGGTGACGGTGGCGCAAAACGATAATCAGGTCAAACTGACCGTCCAGGATAACGGCTGCGGCGTGCCTGAAAATGCCATCCGCAGCAATCACTACGGCATGATAATAATGCGCGATCGTGCGCAAAGTTTACGAGGCGATTGCCGCGTCCGCCGTCGTGAATCAGGTGGCACCGAAGTGGTGGTCACCTTTATTCCCGAAAAAACTTTCACAGACGTCCAAGGAGATACCCATGAGTAA", - "dna_sequence_length": 1797, - "functions": [ - "sensory histidine kinase in two-component regulatory system with NarL" - ], - "id": "CDS_1206", - "location": [ - [ - "NC_000913", - 1277618, - "-", - 1797 - ] - ], - "md5": "589dcf0346dc018d2919298ee9571db5", - "parent_gene": "", - "protein_md5": "6750e1d1e39cbbc861c1a454e853fa12", - "protein_translation": "MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSAHAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDGQLAQLQGLQDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMAVFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNNMSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQNLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRLADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERATIARELHDSIAQSLSCMKMQVSCLQMQGDALPESSRELLSQIRNELNASWAQLRELLTTFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGDCRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE", - "protein_translation_length": 598, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10642" - ], - [ - "gene_synonym", - "GeneID:945783" - ], - [ - "gene_synonym", - "GI:16129186" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10903" - ], - [ - "gene_synonym", - "JW1214" - ], - [ - "gene_synonym", - "NP_415741.1" - ], - [ - "gene_synonym", - "b1223" - ], - [ - "gene_synonym", - "narK" - ], - [ - "gene_synonym", - "ECK1217" - ], - [ - "gene_synonym", - "ASAP:ABE-0004111" - ] - ], - "dna_sequence": "ATGAGTCACTCATCCGCCCCCGAAAGGGCTACTGGAGCTGTCATTACAGATTGGCGACCGGAAGATCCTGCGTTCTGGCAACAACGCGGTCAACGTATTGCCAGCCGCAACCTGTGGATTTCCGTTCCCTGTCTGCTGCTGGCGTTTTGCGTATGGATGTTGTTCAGCGCTGTTGCGGTGAACCTACCGAAAGTCGGCTTTAATTTTACGACCGATCAGCTATTTATGTTGACTGCGCTGCCTTCGGTTTCTGGCGCGTTATTACGTGTTCCATACTCCTTTATGGTTCCTATCTTCGGTGGTCGTCGCTGGACGGCGTTCAGCACCGGTATTCTGATTATTCCTTGCGTCTGGCTGGGTTTTGCCGTGCAGGATACCTCCACGCCTTATAGCGTCTTCATCATCATCTCTCTGCTATGCGGCTTTGCTGGCGCGAACTTCGCATCCAGTATGGCAAACATCAGCTTCTTCTTTCCGAAACAGAAGCAGGGTGGCGCGCTGGGTCTGAATGGTGGTCTGGGAAACATGGGCGTCAGCGTCATGCAGTTGGTTGCTCCGCTGGTGGTATCACTGTCGATTTTCGCAGTATTTGGTAGCCAGGGCGTCAAACAGCCGGATGGGACTGAGCTGTATCTGGCGAATGCGTCCTGGATATGGGTGCCGTTCCTTGCCATCTTCACCATTGCGGCGTGGTTTGGCATGAACGATCTTGCTACCTCGAAAGCCTCCATCAAGGAGCAGTTGCCGGTACTCAAACGGGGTCATCTGTGGATTATGAGCCTGCTGTATCTGGCAACCTTCGGCTCCTTCATCGGCTTCTCCGCGGGCTTTGCAATGCTGTCAAAAACGCAGTTCCCGGATGTTCAGATTCTGCAATACGCTTTCTTCGGGCCGTTTATTGGTGCGCTGGCGCGTTCTGCAGGTGGTGCATTATCTGACCGTCTGGGCGGAACTCGTGTCACGCTGGTGAACTTTATTCTGATGGCGATTTTCAGCGGCCTGCTGTTCCTGACCTTACCGACTGACGGGCAGGGCGGAAGCTTCATGGCGTTCTTCGCGGTCTTCCTGGCGCTGTTCCTGACAGCTGGGCTGGGTAGTGGTTCCACTTTCCAGATGATTTCAGTGATCTTCCGTAAACTGACAATGGATCGCGTGAAAGCAGAAGGGGGTTCTGACGAACGTGCGATGCGTGAAGCGGCAACCGACACGGCGGCGGCGCTGGGTTTCATCTCTGCGATTGGCGCGATTGGTGGCTTCTTTATCCCGAAAGCGTTTGGTAGCTCGCTGGCATTAACGGGTTCGCCAGTCGGCGCAATGAAGGTATTTTTGATTTTCTATATCGCCTGCGTAGTGATTACCTGGGCGGTATATGGTCGGCATTCTAAAAAATAA", - "dna_sequence_length": 1392, - "functions": [ - "nitrate/nitrite transporter" - ], - "id": "CDS_1207", - "location": [ - [ - "NC_000913", - 1277957, - "+", - 1392 - ] - ], - "md5": "abd6a20bb77c28338215058d41623b56", - "parent_gene": "", - "protein_md5": "da11db16b90d0c9b98b9deb569040ab4", - "protein_translation": "MSHSSAPERATGAVITDWRPEDPAFWQQRGQRIASRNLWISVPCLLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGRRWTAFSTGILIIPCVWLGFAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPKQKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWIWVPFLAIFTIAAWFGMNDLATSKASIKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAGFAMLSKTQFPDVQILQYAFFGPFIGALARSAGGALSDRLGGTRVTLVNFILMAIFSGLLFLTLPTDGQGGSFMAFFAVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSDERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACVVITWAVYGRHSKK", - "protein_translation_length": 463, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945782" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09152" - ], - [ - "gene_synonym", - "ASAP:ABE-0004119" - ], - [ - "gene_synonym", - "GI:16129187" - ], - [ - "gene_synonym", - "chlC" - ], - [ - "gene_synonym", - "JW1215" - ], - [ - "gene_synonym", - "NP_415742.1" - ], - [ - "gene_synonym", - "b1224" - ], - [ - "gene_synonym", - "ECK1218" - ], - [ - "gene_synonym", - "narG" - ], - [ - "gene_synonym", - "narC" - ], - [ - "gene_synonym", - "EcoGene:EG10638" - ] - ], - "dna_sequence": "ATGAGTAAATTCCTGGACCGGTTTCGCTACTTCAAACAGAAGGGTGAAACCTTTGCCGATGGGCATGGCCAGCTTCTCAATACCAACCGTGACTGGGAGGATGGATATCGCCAGCGTTGGCAGCATGACAAAATCGTCCGCTCTACCCACGGGGTAAACTGCACCGGCTCCTGCAGCTGGAAAATCTACGTCAAAAACGGTCTGGTCACCTGGGAAACCCAGCAGACTGACTATCCGCGTACCCGTCCGGATCTGCCAAACCATGAACCTCGCGGCTGCCCGCGCGGTGCCAGCTACTCCTGGTATCTTTACAGTGCCAACCGCCTGAAATACCCGATGATGCGCAAACGCCTGATGAAAATGTGGCGTGAAGCGAAGGCGCTGCATAGCGATCCGGTTGAGGCATGGGCTTCTATCATTGAAGACGCCGATAAAGCGAAAAGCTTTAAGCAGGCGCGTGGACGCGGTGGATTTGTTCGTTCTTCCTGGCAGGAGGTGAACGAACTGATCGCCGCATCTAACGTTTACACCATCAAAAACTACGGCCCGGACCGTGTTGCTGGTTTCTCGCCAATTCCGGCAATGTCGATGGTTTCTTACGCATCGGGTGCACGCTATCTCTCGCTGATTGGCGGTACTTGCTTAAGCTTCTACGACTGGTACTGCGACTTGCCTCCTGCGTCTCCGCAAACCTGGGGCGAGCAAACTGACGTACCGGAATCTGCTGACTGGTACAACTCCAGCTACATCATCGCCTGGGGGTCAAACGTGCCGCAGACGCGTACCCCGGATGCTCACTTCTTTACTGAAGTGCGTTACAAAGGGACCAAAACTGTTGCCGTCACACCAGACTACGCTGAAATCGCCAAACTGTGCGATCTGTGGCTGGCACCGAAACAGGGCACCGATGCGGCAATGGCGCTGGCGATGGGCCACGTAATGCTGCGTGAATTCCACCTCGACAACCCAAGCCAGTATTTCACCGACTATGTGCGTCGCTACACCGACATGCCGATGCTGGTGATGCTGGAAGAACGCGACGGTTACTACGCTGCAGGTCGTATGCTGCGCGCTGCTGATCTGGTTGATGCGCTGGGCCAGGAAAACAATCCGGAATGGAAAACTGTCGCCTTTAATACCAATGGCGAAATGGTTGCGCCGAACGGTTCTATTGGCTTCCGCTGGGGCGAGAAGGGCAAATGGAATCTTGAGCAGCGCGACGGCAAAACTGGCGAAGAAACCGAGCTGCAACTGAGCCTGCTGGGTAGCCAGGATGAGATCGCTGAGGTAGGCTTCCCGTACTTTGGTGGCGACGGCACGGAACACTTCAACAAAGTGGAACTGGAAAACGTGCTGCTGCACAAACTGCCGGTGAAACGCCTGCAACTGGCTGATGGCAGCACCGCCCTGGTGACCACCGTTTATGATCTGACGCTGGCAAACTACGGTCTGGAACGTGGCCTGAACGACGTTAACTGTGCAACCAGCTATGACGATGTGAAAGCTTATACCCCGGCCTGGGCCGAGCAGATTACCGGCGTTTCTCGCAGCCAGATTATTCGCATCGCCCGTGAATTTGCCGATAACGCTGATAAAACGCACGGTCGTTCGATGATTATCGTCGGTGCGGGGCTGAACCACTGGTATCACCTCGATATGAACTATCGTGGTCTGATCAACATGCTGATTTTCTGCGGCTGTGTCGGTCAGAGCGGGGGCGGCTGGGCGCACTATGTAGGTCAGGAAAAACTGCGTCCGCAAACCGGCTGGCAGCCGCTGGCGTTTGCCCTTGACTGGCAGCGTCCGGCGCGTCACATGAACAGCACTTCTTATTTCTATAACCACTCCAGCCAGTGGCGTTATGAAACCGTCACGGCGGAAGAGTTGCTGTCACCGATGGCGGACAAATCCCGCTATACCGGACACTTGATCGACTTTAACGTCCGTGCGGAACGCATGGGCTGGCTGCCGTCTGCACCGCAGTTAGGCACTAACCCGCTGACTATCGCTGGCGAAGCGGAAAAAGCCGGGATGAATCCGGTGGACTATACGGTGAAATCCCTGAAAGAGGGTTCCATCCGTTTTGCGGCAGAACAACCAGAAAACGGTAAAAACCACCCGCGCAACCTGTTCATCTGGCGTTCTAACCTGCTCGGTTCTTCCGGTAAAGGTCATGAGTTTATGCTCAAGTACCTGCTGGGGACGGAGCACGGTATCCAGGGTAAAGATCTGGGGCAACAGGGCGGCGTGAAGCCGGAAGAAGTGGACTGGCAGGACAATGGTCTGGAAGGCAAGCTGGATCTGGTGGTTACGCTGGACTTCCGTCTGTCGAGCACCTGTCTCTATTCCGACATCATTTTGCCGACGGCGACCTGGTACGAAAAAGACGACATGAATACTTCGGATATGCATCCGTTTATTCACCCGCTGTCTGCGGCGGTCGATCCGGCCTGGGAAGCGAAAAGCGACTGGGAAATCTACAAAGCCATCGCGAAGAAATTCTCCGAAGTGTGCGTCGGCCATCTGGGTAAAGAAACCGACATCGTCACGCTGCCTATCCAGCATGACTCTGCCGCTGAACTGGCGCAGCCGCTGGATGTGAAAGACTGGAAAAAAGGCGAGTGCGACCTGATCCCAGGTAAAACCGCGCCACACATTATGGTCGTAGAGCGCGATTATCCGGCGACTTACGAACGCTTTACCTCTATCGGCCCGCTGATGGAGAAAATCGGTAATGGCGGTAAAGGGATTGCCTGGAACACCCAGAGCGAGATGGATCTGCTGCGTAAGCTCAACTACACCAAAGCGGAAGGTCCGGCGAAAGGCCAGCCGATGCTGAACACCGCAATTGATGCGGCAGAGATGATCCTGACACTGGCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAGCCCGACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCCGGTTACACCAACGTTCACGAGCTGATCCCATGGCGTACGCTCTCTGGTCGTCAGCAACTGTATCAGGATCACCAGTGGATGCGTGATTTCGGTGAAAGCCTGCTGGTTTATCGTCCGCCGATCGACACCCGTTCGGTGAAAGAAGTGATAGGCCAGAAATCCAACGGCAACCAGGAAAAAGCGCTCAACTTCCTGACGCCGCACCAGAAGTGGGGTATCCACTCCACCTACAGCGACAACCTGCTGATGCTGACTTTAGGTCGCGGTGGTCCGGTGGTCTGGTTGAGTGAAGCCGATGCCAAAGATCTGGGTATCGCCGATAACGACTGGATTGAAGTCTTCAACAGCAACGGTGCTCTGACTGCCCGTGCGGTTGTCAGCCAGCGTGTTCCGGCAGGGATGACCATGATGTACCACGCGCAGGAACGTATCGTTAACCTGCCTGGTTCGGAAATTACCCAACAGCGTGGTGGTATCCATAACTCGGTCACCCGTATCACGCCGAAACCGACGCATATGATCGGCGGCTATGCCCATCTGGCATACGGCTTTAACTACTATGGCACCGTAGGTTCTAACCGCGATGAGTTTGTTGTAGTGCGTAAGATGAAGAACATTGACTGGTTAGATGGCGAAGGCAATGACCAGGTACAGGAGAGCGTAAAATGA", - "dna_sequence_length": 3744, - "functions": [ - "nitrate reductase 1, alpha subunit" - ], - "id": "CDS_1208", - "location": [ - [ - "NC_000913", - 1279864, - "+", - 3744 - ] - ], - "md5": "1aa642ed7f1f1242efe98ee2cf76c3fa", - "parent_gene": "", - "protein_md5": "2393e1b7614eb7f7b893bb8f9ea39198", - "protein_translation": "MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGHLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKSNGNQEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEVFNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIGGYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQVQESVK", - "protein_translation_length": 1247, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945780" - ], - [ - "gene_synonym", - "b1225" - ], - [ - "gene_synonym", - "GI:16129188" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11349" - ], - [ - "gene_synonym", - "chlC" - ], - [ - "gene_synonym", - "JW1216" - ], - [ - "gene_synonym", - "narH" - ], - [ - "gene_synonym", - "ECK1219" - ], - [ - "gene_synonym", - "ASAP:ABE-0004121" - ], - [ - "gene_synonym", - "EcoGene:EG10639" - ], - [ - "gene_synonym", - "NP_415743.1" - ] - ], - "dna_sequence": "ATGAAAATTCGTTCACAAGTCGGCATGGTGCTGAATCTCGATAAGTGCATCGGCTGCCACACCTGTTCAGTTACCTGTAAAAACGTCTGGACCAGCCGTGAAGGCGTGGAATATGCGTGGTTCAACAACGTGGAAACCAAGCCGGGCCAGGGCTTCCCGACTGACTGGGAAAACCAGGAAAAATACAAAGGCGGCTGGATCCGTAAAATCAACGGCAAACTGCAGCCGCGCATGGGTAACCGTGCCATGCTGCTGGGTAAAATCTTCGCTAACCCGCATCTGCCGGGGATCGACGATTATTACGAGCCGTTCGATTTTGACTATCAGAACCTGCATACCGCGCCGGAAGGCAGCAAATCGCAGCCGATTGCCCGTCCGCGTTCGCTGATTACCGGGGAACGGATGGCGAAAATCGAAAAAGGGCCGAACTGGGAAGATGACCTGGGCGGTGAGTTTGACAAACTGGCGAAAGACAAGAACTTCGACAACATCCAGAAGGCGATGTATAGCCAGTTCGAAAACACCTTCATGATGTATTTGCCGCGCCTGTGCGAACACTGCCTGAACCCGGCATGTGTGGCGACCTGCCCGAGCGGTGCGATTTACAAGCGTGAAGAAGATGGCATCGTCCTGATCGACCAGGATAAATGCCGTGGCTGGCGTATGTGCATCACTGGATGCCCGTACAAAAAAATCTACTTCAACTGGAAGAGCGGTAAGTCTGAGAAGTGCATCTTCTGCTATCCGCGTATTGAAGCGGGTCAGCCGACCGTGTGCTCAGAAACCTGTGTCGGTCGTATCCGTTATCTTGGCGTGCTGTTGTACGATGCCGACGCTATTGAACGTGCAGCCAGCACCGAGAACGAGAAAGATCTTTACCAGCGTCAGCTGGACGTGTTCCTCGATCCGAACGATCCGAAAGTCATCGAGCAGGCGATTAAAGACGGTATTCCGCTGAGCGTTATTGAAGCCGCACAGCAGTCGCCGGTTTATAAAATGGCAATGGAATGGAAACTGGCGCTGCCGCTGCATCCGGAATATCGCACACTGCCGATGGTCTGGTACGTGCCGCCTCTGTCTCCGATTCAGTCTGCAGCAGACGCGGGTGAGCTGGGTAGCAACGGCATTCTGCCAGACGTCGAAAGCCTGCGTATTCCGGTACAGTATCTGGCGAATCTGCTGACCGCCGGTGATACCAAACCGGTACTGCGCGCACTGAAACGTATGCTGGCGATGCGTCATTACAAACGTGCTGAAACCGTTGACGGTAAAGTTGATACCCGTGCGCTGGAAGAGGTCGGTCTGACCGAAGCCCAGGCACAGGAGATGTACCGTTATCTGGCGATTGCTAACTACGAAGATCGCTTTGTGGTGCCGAGTAGTCATCGTGAACTGGCACGGGAAGCCTTCCCGGAGAAAAATGGCTGCGGCTTTACCTTTGGTGATGGCTGCCACGGTTCAGATACCAAATTCAATCTGTTCAACAGCCGTCGTATCGATGCCATCGATGTGACCAGCAAAACGGAGCCGCATCCATGA", 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"EcoGene:EG10641" - ], - [ - "gene_synonym", - "ASAP:ABE-0004123" - ], - [ - "gene_synonym", - "narJ" - ], - [ - "gene_synonym", - "NP_415744.1" - ], - [ - "gene_synonym", - "JW1217" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF26" - ], - [ - "gene_synonym", - "b1226" - ], - [ - "gene_synonym", - "ECK1220" - ], - [ - "gene_synonym", - "GeneID:945807" - ] - ], - "dna_sequence": "ATGATCGAACTCGTGATTGTATCGCGTCTCCTTGAATATCCGGATGCTGCCTTATGGCAGCATCAACAAGAGATGTTTGAGGCGATTGCCGCGTCGAAAAATCTGCCAAAAGAGGATGCCCATGCGCTGGGCATTTTCCTGCGCGATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGATGGTGGACCTGCTGGCGCAGTACGAGCAGCACGGCTTGCAGTTAAACAGCCGCGAATTGCCGGACCATCTGCCGCTGTATCTGGAGTACCTGGCGCAGCTGCCGCAAAGCGAAGCCGTGGAAGGTTTGAAAGATATCGCGCCGATTCTGGCATTGCTGAGCGCGCGTCTGCAACAGCGTGAAAGCCGTTATGCCGTGCTGTTTGATCTGCTGCTGAAACTGGCGAATACCGCTATCGACAGCGACAAAGTGGCGGAAAAAATTGCCGACGAAGCGCGCGATGATACGCCGCAGGCGCTGGATGCTGTCTGGGAAGAAGAGCAGGTTAAATTCTTTGCTGACAAAGGCTGCGGTGATTCAGCAATCACTGCGCATCAGCGTCGCTTTGCCGGTGCCGTCGCGCCGCAATATCTGAATATCACCACCGGAGGACAGCACTAA", - "dna_sequence_length": 711, - "functions": [ - "molybdenum-cofactor-assembly chaperone delta subunit of nitrate reductase 1" - ], - "id": "CDS_1210", - "location": [ - [ - "NC_000913", - 1285139, - "+", - 711 - ] - ], - "md5": "a09d9b21e597b61dda0f3bab055ccb33", - "parent_gene": "", 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"ATGCAATTCCTGAATATGTTCTTCTTTGATATCTACCCGTACATAGCCGGGGCGGTCTTCCTGATTGGTAGCTGGCTGCGTTATGACTACGGGCAGTACACCTGGCGCGCGGCGTCCAGCCAGATGCTGGATCGCAAAGGGATGAACCTGGCGTCGAACCTGTTCCATATCGGGATTCTGGGGATTTTTGTCGGTCACTTCTTCGGTATGCTGACGCCGCACTGGATGTATGAAGCCTGGCTGCCGATTGAAGTGAAACAGAAAATGGCAATGTTTGCTGGTGGTGCCAGCGGCGTGCTGTGTCTGATTGGCGGCGTGCTGTTGCTGAAACGTCGTCTGTTCAGCCCACGCGTGCGTGCAACCACTACCGGAGCGGATATCCTGATCCTGTCGCTGCTCGTTATCCAGTGCGCGCTGGGCCTGTTGACCATTCCGTTCTCCGCTCAGCATATGGACGGTAGCGAGATGATGAAACTGGTTGGCTGGGCGCAGTCGGTGGTGACCTTCCACGGTGGCGCTTCTCAACACCTCGATGGTGTGGCGTTTATCTTCCGTCTGCACCTGGTGCTGGGGATGACGTTATTCCTGCTGTTCCCGTTCTCGCGTCTGATACACATCTGGAGCGTACCGGTGGAGTATCTGACACGTAAGTACCAGCTGGTGCGCGCTCGTCACTAA", - "dna_sequence_length": 678, - "functions": [ - "nitrate reductase 1, gamma (cytochrome b(NR)) subunit" - ], - "id": "CDS_1211", - "location": [ - [ - "NC_000913", - 1285849, - "+", - 678 - ] - ], - "md5": "2893a694495cdf24f4fb2b4221f0a18c", - "parent_gene": "", - "protein_md5": "33cbdb10e3ac7dca7844d1fc5907a9dd", - "protein_translation": "MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLDRKGMNLASNLFHIGILGIFVGHFFGMLTPHWMYEAWLPIEVKQKMAMFAGGASGVLCLIGGVLLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLVGWAQSVVTFHGGASQHLDGVAFIFRLHLVLGMTLFLLFPFSRLIHIWSVPVEYLTRKYQLVRARH", - "protein_translation_length": 225, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1219" - ], - [ - "gene_synonym", - "ASAP:ABE-0004131" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02338" - ], - [ - "gene_synonym", - "GeneID:946224" - ], - [ - "gene_synonym", - "GI:145698249" - ], - [ - "gene_synonym", - "ECK1224" - ], - [ - "gene_synonym", - "tpr" - ], - [ - "gene_synonym", - "EcoGene:EG11016" - ], - [ - "gene_synonym", - "NP_415747.2" - ], - [ - "gene_synonym", - "b1229" - ] - ], - "dna_sequence": "ATGAGAAGCTTCGACCAAGGTTCGACTCGAGCGCCAGCGAGAGAGCGTTGCCGCAGGCAACGACCCGAAGGGCGAAGCGCGCAGCGCTGA", - "dna_sequence_length": 90, - "functions": [ - "protamine-like protein" - ], - "id": "CDS_1212", - "location": [ - [ - "NC_000913", - 1287176, - "-", - 90 - ] - ], - "md5": "74e6ce8822d2b4a6853691bc08ed751c", - "parent_gene": "", - "protein_md5": "93af467cefb8446a31e880287294db33", - "protein_translation": "MRSFDQGSTRAPARERCRRQRPEGRSAQR", - "protein_translation_length": 29, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004138" - ], - [ - "gene_synonym", - "tgs" - ], - [ - "gene_synonym", - "GeneID:945827" - ], - [ - "gene_synonym", - "purU" - ], - [ - "gene_synonym", - "NP_415748.1" - ], - [ - "gene_synonym", - "GI:16129193" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37051" - ], - [ - "gene_synonym", - "ECK1227" - ], - [ - "gene_synonym", - "EcoGene:EG11819" - ], - [ - "gene_synonym", - "JW1220" - ], - [ - "gene_synonym", - "b1232" - ], - [ - "gene_synonym", - "ychI" - ] - ], - "dna_sequence": "ATGCATTCACTCCAACGTAAAGTTCTGCGTACTATTTGTCCGGACCAAAAAGGTCTGATCGCACGTATTACCAATATTTGCTACAAGCACGAGTTAAATATCGTACAGAACAATGAATTTGTTGATCACCGTACCGGGCGCTTTTTTATGCGCACGGAACTGGAAGGGATTTTTAATGATTCCACCCTGCTGGCGGATCTCGATAGCGCATTGCCAGAAGGCTCCGTGCGTGAGCTGAATCCTGCCGGTCGTCGCCGGATAGTGATTCTGGTCACTAAAGAAGCGCATTGCCTTGGCGATTTGTTGATGAAAGCCAATTACGGCGGCCTGGATGTCGAAATCGCGGCAGTTATTGGTAACCACGATACTTTACGTTCTCTGGTTGAGCGTTTTGATATTCCGTTTGAGCTGGTAAGCCATGAAGGGTTAACCCGCAACGAGCACGATCAAAAGATGGCGGATGCCATTGATGCTTATCAACCTGACTACGTGGTGCTGGCGAAGTATATGCGGGTATTAACGCCGGAATTTGTGGCACGCTTCCCGAATAAGATCATCAATATTCACCATTCATTCCTGCCAGCGTTTATTGGCGCACGTCCTTATCACCAGGCCTATGAACGTGGTGTGAAGATTATTGGCGCAACCGCTCACTATGTGAATGACAATCTGGACGAAGGCCCAATCATCATGCAGGACGTTATTCATGTCGATCATACCTACACAGCTGAAGATATGATGCGCGCAGGTCGTGACGTCGAGAAAAACGTCTTAAGTCGTGCACTATACAAAGTACTGGCACAGCGCGTCTTTGTTTACGGTAATCGAACGATTATTCTTTAA", - "dna_sequence_length": 843, - "functions": [ - "formyltetrahydrofolate hydrolase" - ], - "id": "CDS_1213", - "location": [ - [ - "NC_000913", - 1288624, - "-", - 843 - ] - ], - "md5": "ad18a8053ab90eddff151f57aaaadd72", - "parent_gene": "", - "protein_md5": "e20825855d949f703ae9f801d1264938", - "protein_translation": "MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIGNHDTLRSLVERFDIPFELVSHEGLTRNEHDQKMADAIDAYQPDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYGNRTIIL", - "protein_translation_length": 280, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12119" - ], - [ - "gene_synonym", - "GeneID:945828" - ], - [ - "gene_synonym", - "GI:16129194" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37052" - ], - [ - "gene_synonym", - "b1233" - ], - [ - "gene_synonym", - "NP_415749.1" - ], - [ - "gene_synonym", - "ECK1228" - ], - [ - "gene_synonym", - "ASAP:ABE-0004140" - ], - [ - "gene_synonym", - "ychJ" - ], - [ - "gene_synonym", - "JW1221" - ] - ], - "dna_sequence": "GTGTCTCAGCTTTGTCCCTGTGGTAGTGCTGTCGAGTATAGCCTATGTTGCCACCCTTATGTGTCTGGTGAAAAGGTTGCACCTGATCCAGAACATCTCATGCGTTCGCGTTACTGCGCTTTTGTGATGCAAGACGCAGATTATTTAATAAAGACCTGGCATCCCTCTTGTGGAGCAGCGGCGTTACGTGCCGAATTGATGGCCGGATTTGCGCATACTGAATGGTTGGGATTGACCGTATTTGAACATTGTTGGCAGGACGCCGACAATATCGGATTTGTCAGTTTTGTTGCTCGATTTACCGAAGGTGGTAAAACAGGTGCAATAATTGAACGTTCGCGATTTTTGAAAGAAAACGGTCAATGGTACTATATTGACGGTACACGTCCGCAGTTTGGTCGCAACGATCCCTGCCCTTGTGGTTCAGGTAAAAAATTTAAAAAGTGCTGCGGCCAATAA", - "dna_sequence_length": 459, - "functions": [ - "UPF0225 family protein" - ], - "id": "CDS_1214", - "location": [ - [ - "NC_000913", - 1289132, - "-", - 459 - ] - ], - "md5": "0f607b2d05ca0bbd607e0d62afa7600a", - "parent_gene": "", - "protein_md5": "c837cec7ee838ac530183a98fe374f38", - "protein_translation": "MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQDADYLIKTWHPSCGAAALRAELMAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ", - "protein_translation_length": 152, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12120" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFR0" - ], - [ - "gene_synonym", - "GeneID:945725" - ], - [ - "gene_synonym", - "rssA" - ], - [ - "gene_synonym", - "b1234" - ], - [ - "gene_synonym", - "GI:226524709" - ], - [ - "gene_synonym", - "JW1222" - ], - [ - "gene_synonym", - "ASAP:ABE-0004144" - ], - [ - "gene_synonym", - "NP_415750.2" - ], - [ - "gene_synonym", - "ECK1229" - ], - [ - "gene_synonym", - "ychK" - ] - ], - "dna_sequence": "ATGAGAAAGATAAAAATAGGGCTGGCGCTGGGATCTGGCGCGGCGAGAGGTTGGTCGCATATTGGCGTTATTAATGCGCTAAAAAAAGTGGGTATTGAAATTGATATCGTTGCAGGATGTTCAATTGGTTCGCTGGTGGGCGCTGCCTATGCATGCGATCGATTATCTGCGCTGGAAGATTGGGTGACCTCTTTCAGTTATTGGGATGTTTTACGCCTGATGGATCTCTCCTGGCAGCGCGGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCGTCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGGCGATCTCCATCTTGCTATTCGCGCATCATGCAGTATTCCAGGACTCATGGCACCTGTTGCACATAACGGCTACTGGCTGGTTGATGGAGCAGTCGTTAACCCAATTCCTATTTCCCTCACGCGTGCATTGGGGGCTGATATTGTGATAGCGGTTGACCTGCAGCACGATGCTCATTTGATGCAACAAGATTTGCTCTCCTTTAATGTCAGTGAAGAAAATAGCGAGAATGGTGATTCTCTGCCGTGGCATGCGCGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACAGAGATTATGACCACTTCTATCCAGGTGCTGGAGAACCGCCTTAAAAGGAACCGCATGGCAGGTGATCCGCCCGATATTCTGATTCAACCTGTTTGCCCGCAAATATCTACGCTTGATTTCCATCGCGCGCACGCTGCCATTGCGGCCGGACAGCTGGCAGTGGAAAGGAAAATGGACGAACTTTTGCCGTTGGTACGCACCAACATTTGA", - "dna_sequence_length": 906, - "functions": [ - "putative patatin-like family 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"gene_synonym", - "ECK1230" - ], - [ - "gene_synonym", - "JW1223" - ], - [ - "gene_synonym", - "ychL" - ], - [ - "gene_synonym", - "sprE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEV1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004147" - ] - ], - "dna_sequence": "ATGACGCAGCCATTGGTCGGAAAACAGATTCTCATTGTTGAAGATGAGCAGGTATTTCGCTCGCTTCTGGATTCATGGTTTTCCTCATTGGGAGCGACAACGGTACTGGCGGCTGATGGGGTGGATGCCCTTGAGTTGCTGGGAGGTTTCACTCCAGACCTGATGATATGTGATATCGCGATGCCACGAATGAACGGGCTTAAACTGCTGGAGCATATACGTAACAGAGGCGACCAGACCCCAGTTCTGGTGATATCTGCCACTGAAAATATGGCAGATATTGCCAAAGCGTTACGTCTGGGCGTTGAAGATGTTTTGCTGAAACCAGTTAAAGATCTGAATCGCTTGCGCGAGATGGTTTTTGCCTGTCTCTATCCCAGCATGTTTAATTCGCGCGTTGAGGAAGAGGAAAGGCTTTTTCGCGACTGGGATGCAATGGTTGATAACCCTGCCGCAGCGGCGAAATTATTACAGGAACTACAACCGCCGGTTCAGCAGGTGATTTCCCATTGCCGGGTTAATTATCGTCAATTGGTTGCCGCGGACAAACCCGGCCTGGTGCTTGATATTGCCGCACTTTCGGAAAACGATCTGGCATTTTATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGAAAAATCTCATTCTGGTTTCTGCGGGTCTGAATGCGACGTTAAATACCGGCGAACACCAGGTGCAAATCAGTAATGGTGTTCCGTTAGGCACTTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGGTCGACTGCGCTTGATGTTGTCTGCAGAATGA", 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"JW1224" - ], - [ - "gene_synonym", - "b1236" - ], - [ - "gene_synonym", - "EcoGene:EG11319" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEP3" - ], - [ - "gene_synonym", - "ECK1231" - ], - [ - "gene_synonym", - "ychD" - ], - [ - "gene_synonym", - "ASAP:ABE-0004150" - ] - ], - "dna_sequence": "ATGGCTGCCATTAATACGAAAGTCAAAAAAGCCGTTATCCCCGTTGCGGGATTAGGAACCAGGATGTTGCCGGCGACGAAAGCCATCCCGAAAGAGATGCTGCCACTTGTCGATAAGCCATTAATTCAATACGTCGTGAATGAATGTATTGCGGCTGGCATTACTGAAATTGTGCTGGTTACACACTCATCTAAAAACTCTATTGAAAACCACTTTGATACCAGTTTTGAACTGGAAGCAATGCTGGAAAAACGTGTAAAACGTCAACTGCTTGATGAAGTGCAGTCTATTTGTCCACCGCACGTGACTATTATGCAAGTTCGTCAGGGTCTGGCGAAAGGCCTGGGACACGCGGTATTGTGTGCTCACCCGGTAGTGGGTGATGAACCGGTAGCTGTTATTTTGCCTGATGTTATTCTGGATGAATATGAATCCGATTTGTCACAGGATAACCTGGCAGAGATGATCCGCCGCTTTGATGAAACGGGTCATAGCCAGATCATGGTTGAACCGGTTGCTGATGTGACCGCATATGGCGTTGTGGATTGCAAAGGCGTTGAATTAGCGCCGGGTGAAAGCGTACCGATGGTTGGTGTGGTAGAAAAACCGAAAGCGGATGTTGCGCCGTCTAATCTCGCTATTGTGGGTCGTTACGTACTTAGCGCGGATATTTGGCCGTTGCTGGCAAAAACCCCTCCGGGAGCTGGTGATGAAATTCAGCTCACCGACGCAATTGATATGCTGATCGAAAAAGAAACGGTGGAAGCCTATCATATGAAAGGGAAGAGCCATGACTGCGGTAATAAATTAGGTTACATGCAGGCCTTCGTTGAATACGGTATTCGTCATAACACCCTTGGCACGGAATTTAAAGCCTGGCTTGAAGAAGAGATGGGCATTAAGAAGTAA", - "dna_sequence_length": 909, - "functions": [ - "glucose-1-phosphate uridylyltransferase" - ], - "id": "CDS_1217", - "location": [ - [ - "NC_000913", - 1291457, - "+", - 909 - ] - ], - "md5": "26e6c27b2b1a75844eb1e39b33f1ce81", - "parent_gene": "", - "protein_md5": "0b0bf4f1305f9216153bfac86a8062a8", - "protein_translation": "MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGHSQIMVEPVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNTLGTEFKAWLEEEMGIKK", - "protein_translation_length": 302, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1232" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACF8" - ], - [ - "gene_synonym", - "pilG" - ], - [ - "gene_synonym", - "ASAP:ABE-0004152" - ], - [ - "gene_synonym", - "GI:16129198" - ], - [ - "gene_synonym", - "cur" - ], - [ - "gene_synonym", - "drdX" - ], - [ - "gene_synonym", - "GeneID:945829" - ], - [ - "gene_synonym", - "virR" - ], - [ - "gene_synonym", - "b1237" - ], - [ - "gene_synonym", - "irk" - ], - [ - "gene_synonym", - "bglY" - ], - [ - "gene_synonym", - "hnsA" - ], - [ - "gene_synonym", - "osmZ" - ], - [ - "gene_synonym", - "NP_415753.1" - ], - [ - "gene_synonym", - "topX" - ], - [ - "gene_synonym", - "drs" - ], - [ - "gene_synonym", - "H1" - ], - [ - "gene_synonym", - "topS" - ], - [ - "gene_synonym", - "verA" - ], - [ - "gene_synonym", - "JW1225" - ], - [ - "gene_synonym", - "hns" - ], - [ - "gene_synonym", - "EcoGene:EG10457" - ], - [ - "gene_synonym", - "B1" - ], - [ - "gene_synonym", - "fimG" - ], - [ - "gene_synonym", - "drc" - ], - [ - "gene_synonym", - "msyA" - ] - ], - "dna_sequence": "ATGAGCGAAGCACTTAAAATTCTGAACAACATCCGTACTCTTCGTGCGCAGGCAAGAGAATGTACACTTGAAACGCTGGAAGAAATGCTGGAAAAATTAGAAGTTGTTGTTAACGAACGTCGCGAAGAAGAAAGCGCGGCTGCTGCTGAAGTTGAAGAGCGCACTCGTAAACTGCAGCAATATCGCGAAATGCTGATCGCTGACGGTATTGACCCGAACGAACTGCTGAATAGCCTTGCTGCCGTTAAATCTGGCACCAAAGCTAAACGTGCTCAGCGTCCGGCAAAATATAGCTACGTTGACGAAAACGGCGAAACTAAAACCTGGACTGGCCAAGGCCGTACTCCAGCTGTAATCAAAAAAGCAATGGATGAGCAAGGTAAATCCCTCGACGATTTCCTGATCAAGCAATAA", - "dna_sequence_length": 414, - "functions": [ - "global DNA-binding transcriptional dual regulator H-NS" - ], - "id": "CDS_1218", - "location": [ - [ - "NC_000913", - 1292922, - "-", - 414 - ] - ], - "md5": "94d475e607b31e241502b9c1820513de", - "parent_gene": "", - "protein_md5": "fdac5ebd57f1155340d7ac31bae488cd", - "protein_translation": "MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDENGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ", - "protein_translation_length": 137, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tdk" - ], - [ - "gene_synonym", - "GI:16129199" - ], - [ - "gene_synonym", - "GeneID:945834" - ], - [ - "gene_synonym", - "EcoGene:EG10994" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23331" - ], - [ - "gene_synonym", - "JW1226" - ], - [ - "gene_synonym", - "ECK1233" - ], - [ - "gene_synonym", - "NP_415754.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004157" - ], - [ - "gene_synonym", - "b1238" - ] - ], - "dna_sequence": "ATGGCACAGCTATATTTCTACTATTCCGCAATGAATGCGGGTAAGTCTACAGCATTGTTGCAATCTTCATACAATTACCAGGAACGCGGCATGCGCACTGTCGTATATACGGCAGAAATTGATGATCGCTTTGGTGCCGGGAAAGTCAGTTCGCGTATAGGTTTGTCATCGCCTGCAAAATTATTTAACCAAAATTCATCATTATTTGATGAGATTCGTGCGGAACATGAACAGCAGGCAATTCATTGCGTACTGGTTGATGAATGCCAGTTTTTAACCAGACAACAAGTATATGAATTATCGGAGGTTGTCGATCAACTCGATATACCCGTACTTTGTTATGGTTTACGTACCGATTTTCGAGGTGAATTATTTATTGGCAGCCAATACTTACTGGCATGGTCCGACAAACTGGTTGAATTAAAAACCATCTGTTTTTGTGGCCGTAAAGCAAGCATGGTGCTGCGTCTTGATCAAGCAGGCAGACCTTATAACGAAGGTGAGCAGGTGGTAATTGGTGGTAATGAACGATACGTTTCTGTATGCCGTAAACACTATAAAGAGGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAA", - "dna_sequence_length": 618, - "functions": [ - "thymidine kinase/deoxyuridine kinase" - ], - "id": "CDS_1219", - "location": [ - [ - "NC_000913", - 1293527, - "+", - 618 - ] - ], - "md5": "1a5eeb088ced90943a3f90df47ad80ac", - "parent_gene": "", - "protein_md5": "5dfb8cec10b673adb722072f815ea2e4", - "protein_translation": "MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPAKLFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYELSEVVDQLDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQAGRPYNEGEQVVIGGNERYVSVCRKHYKEALQVDSLTAIQERHRHD", - "protein_translation_length": 205, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:4056037" - ], - [ - "gene_synonym", - "EcoGene:EG11611" - ], - [ - "gene_synonym", - "ychR" - ], - [ - "gene_synonym", - "b4573" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30192" - ], - [ - "gene_synonym", - "ECK1234" - ], - [ - "gene_synonym", - "ychG" - ], - [ - "gene_synonym", - "ASAP:ABE-0004161" - ], - [ - "gene_synonym", - "ASAP:ABE-0004159" - ], - [ - "gene_synonym", - "insZ" - ], - [ - "gene_synonym", - "JW5883" - ], - [ - "gene_synonym", - "ASAP:ABE-0285106" - ], - [ - "gene_synonym", - "JW1227" - ] - ], - "dna_sequence": "ATGCCACTTCTCAATGATCTGCTCGATTTCAGTGACCATCCGCTTATGCCTCCGCCCTCTGCACAACTATTTGCAGAACACCTTCCCACCGAGTGGATACAACACTGCCTGACGCTTTCTGCTCATGCGACCGTTCGCCGCCGTCGTTTACCGGGGGACATGGTTATCTGGATGGTGGTGCAAAATGAGCCAATTACCGATGTTGTTCGCCGTCTGAACCTGAGCGCGGATGGCGAAGCGGGGATGAACCTGCTGGCCCGCAGCGCTGTCACCCAGGCGCGTCAGCGCGTGGGGGCCGCCCCAGTGGAATGGCTCTTCCGCCAGACCGCACAGGACAGGGGCGCGGAACGTTACCTGAAGGATGACTGGCACGGCCTGCAACTTTTTGCCATTGATGGCGCACAGTTCAGGACACCTGATAAACCCGAGCTGCGTGAATATTATGGGTCTGCCAACACATCCACTAAGCGGCAGAACGCCTACCCGGTTATGCGTCTGGTGGCCTTAATGAACCTGGGAAGTCACATTCTGCTGAATGCCGTGACCGCACCTTACCGGCAGAGCGAAACTGTGCTGGCCCACTCCATGCTCGCCACCATCCCGGATAACTCTATTACGTTGTTTGATAAACTTTTTTACAGCGAAGACCTGCTGCTGACGCTGAACCAGAAGGGTTGTAACCGCCACTGGCTACTGCCTGCGTGGAAGAATATCGCATCAGAAATGATAGAGCTGGGAAACACGGCGTCACCAGGGACCATCCCGAAACGACTGGAGCATCTTCGGGGTGCTCTGGAAGTGGTGTTCATAACAAAACGCCCCCGACCATCAAGGCCGAGGTCGGTTAAGATATCAAAAACCCGTTATCCTGTGAAACATAGTGCCGCTCCTCTTAAGTGA", - "dna_sequence_length": 900, - "id": "CDS_1220", - "location": [ - [ - "NC_000913", - 1295322, - "-", - 183 - ], - [ - "NC_000913", - 1295141, - "-", - 150 - ], - [ - "NC_000913", - 1294992, - "-", - 567 - ] - ], - "md5": "ac53f7e322ea10215709902967d3cb42", - "parent_gene": "", - "protein_md5": "3e71cf099e23dae9ea21f906e9dc5711", - "protein_translation": "MPLLNDLLDFSDHPLMPPPSAQLFAEHLPTEWIQHCLTLSAHATVRRRRLPGDMVIWMVVQNEPITDVVRRLNLSADGEAGMNLLARSAVTQARQRVGAAPVEWLFRQTAQDRGAERYLKDDWHGLQLFAIDGAQFRTPDKPELREYYGSANTSTKRQNAYPVMRLVALMNLGSHILLNAVTAPYRQSETVLAHSMLATIPDNSITLFDKLFYSEDLLLTLNQKGCNRHWLLPAWKNIASEMIELGNTASPGTIPKRLEHLRGALEVVFITKRPRPSRPRSVKISKTRYPVKHSAAPLK", - "protein_translation_length": 299, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ana" - ], - [ - "gene_synonym", - "b1241" - ], - [ - "gene_synonym", - "NP_415757.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9Q7" - ], - [ - "gene_synonym", - "adhC" - ], - [ - "gene_synonym", - "ECK1235" - ], - [ - "gene_synonym", - "ASAP:ABE-0004164" - ], - [ - "gene_synonym", - "EcoGene:EG10031" - ], - [ - "gene_synonym", - "adhE" - ], - [ - "gene_synonym", - "GI:16129202" - ], - [ - "gene_synonym", - "JW1228" - ], - [ - "gene_synonym", - "GeneID:945837" - ] - ], - "dna_sequence": "ATGGCTGTTACTAATGTCGCTGAACTTAACGCACTCGTAGAGCGTGTAAAAAAAGCCCAGCGTGAATATGCCAGTTTCACTCAAGAGCAAGTAGACAAAATCTTCCGCGCCGCCGCTCTGGCTGCTGCAGATGCTCGAATCCCACTCGCGAAAATGGCCGTTGCCGAATCCGGCATGGGTATCGTCGAAGATAAAGTGATCAAAAACCACTTTGCTTCTGAATATATCTACAACGCCTATAAAGATGAAAAAACCTGTGGTGTTCTGTCTGAAGACGACACTTTTGGTACCATCACTATCGCTGAACCAATCGGTATTATTTGCGGTATCGTTCCGACCACTAACCCGACTTCAACTGCTATCTTCAAATCGCTGATCAGTCTGAAGACCCGTAACGCCATTATCTTCTCCCCGCACCCGCGTGCAAAAGATGCCACCAACAAAGCGGCTGATATCGTTCTGCAGGCTGCTATCGCTGCCGGTGCTCCGAAAGATCTGATCGGCTGGATCGATCAACCTTCTGTTGAACTGTCTAACGCACTGATGCACCACCCAGACATCAACCTGATCCTCGCGACTGGTGGTCCGGGCATGGTTAAAGCCGCATACAGCTCCGGTAAACCAGCTATCGGTGTAGGCGCGGGCAACACTCCAGTTGTTATCGATGAAACTGCTGATATCAAACGTGCAGTTGCATCTGTACTGATGTCCAAAACCTTCGACAACGGCGTAATCTGTGCTTCTGAACAGTCTGTTGTTGTTGTTGACTCTGTTTATGACGCTGTACGTGAACGTTTTGCAACCCACGGCGGCTATCTGTTGCAGGGTAAAGAGCTGAAAGCTGTTCAGGATGTTATCCTGAAAAACGGTGCGCTGAACGCGGCTATCGTTGGTCAGCCAGCCTATAAAATTGCTGAACTGGCAGGCTTCTCTGTACCAGAAAACACCAAGATTCTGATCGGTGAAGTGACCGTTGTTGATGAAAGCGAACCGTTCGCACATGAAAAACTGTCCCCGACTCTGGCAATGTACCGCGCTAAAGATTTCGAAGACGCGGTAGAAAAAGCAGAGAAACTGGTTGCTATGGGCGGTATCGGTCATACCTCTTGCCTGTACACTGACCAGGATAACCAACCGGCTCGCGTTTCTTACTTCGGTCAGAAAATGAAAACGGCGCGTATCCTGATTAACACCCCAGCGTCTCAGGGTGGTATCGGTGACCTGTATAACTTCAAACTCGCACCTTCCCTGACTCTGGGTTGTGGTTCTTGGGGTGGTAACTCCATCTCTGAAAACGTTGGTCCGAAACACCTGATCAACAAGAAAACCGTTGCTAAGCGAGCTGAAAACATGTTGTGGCACAAACTTCCGAAATCTATCTACTTCCGCCGTGGCTCCCTGCCAATCGCGCTGGATGAAGTGATTACTGATGGCCACAAACGTGCGCTCATCGTGACTGACCGCTTCCTGTTCAACAATGGTTATGCTGATCAGATCACTTCCGTACTGAAAGCAGCAGGCGTTGAAACTGAAGTCTTCTTCGAAGTAGAAGCGGACCCGACCCTGAGCATCGTTCGTAAAGGTGCAGAACTGGCAAACTCCTTCAAACCAGACGTGATTATCGCGCTGGGTGGTGGTTCCCCGATGGACGCCGCGAAGATCATGTGGGTTATGTACGAACATCCGGAAACTCACTTCGAAGAGCTGGCGCTGCGCTTTATGGATATCCGTAAACGTATCTACAAGTTCCCGAAAATGGGCGTGAAAGCGAAAATGATCGCTGTCACCACCACTTCTGGTACAGGTTCTGAAGTCACTCCGTTTGCGGTTGTAACTGACGACGCTACTGGTCAGAAATATCCGCTGGCAGACTATGCGCTGACTCCGGATATGGCGATTGTCGACGCCAACCTGGTTATGGACATGCCGAAGTCCCTGTGTGCTTTCGGTGGTCTGGACGCAGTAACTCACGCCATGGAAGCTTATGTTTCTGTACTGGCATCTGAGTTCTCTGATGGTCAGGCTCTGCAGGCACTGAAACTGCTGAAAGAATATCTGCCAGCGTCCTACCACGAAGGGTCTAAAAATCCGGTAGCGCGTGAACGTGTTCACAGTGCAGCGACTATCGCGGGTATCGCGTTTGCGAACGCCTTCCTGGGTGTATGTCACTCAATGGCGCACAAACTGGGTTCCCAGTTCCATATTCCGCACGGTCTGGCAAACGCCCTGCTGATTTGTAACGTTATTCGCTACAATGCGAACGACAACCCGACCAAGCAGACTGCATTCAGCCAGTATGACCGTCCGCAGGCTCGCCGTCGTTATGCTGAAATTGCCGACCACTTGGGTCTGAGCGCACCGGGCGACCGTACTGCTGCTAAGATCGAGAAACTGCTGGCATGGCTGGAAACGCTGAAAGCTGAACTGGGTATTCCGAAATCTATCCGTGAAGCTGGCGTTCAGGAAGCAGACTTCCTGGCGAACGTGGATAAACTGTCTGAAGATGCATTCGATGACCAGTGCACCGGCGCTAACCCGCGTTACCCGCTGATCTCCGAGCTGAAACAGATTCTGCTGGATACCTACTACGGTCGTGATTATGTAGAAGGTGAAACTGCAGCGAAGAAAGAAGCTGCTCCGGCTAAAGCTGAGAAAAAAGCGAAAAAATCCGCTTAA", - "dna_sequence_length": 2676, - "functions": [ - "fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase" - ], - "id": "CDS_1221", - "location": [ - [ - "NC_000913", - 1298121, - "-", - 2676 - ] - ], - "md5": "8a2a4f075568333e634e6907324ff253", - "parent_gene": "", - "protein_md5": "74428bf03d3c75c944ea0b2eb632701f", - "protein_translation": "MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAADARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGVLSEDDTFGTITIAEPIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKDATNKAADIVLQAAIAAGAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFATHGGYLLQGKELKAVQDVILKNGALNAAIVGQPAYKIAELAGFSVPENTKILIGEVTVVDESEPFAHEKLSPTLAMYRAKDFEDAVEKAEKLVAMGGIGHTSCLYTDQDNQPARVSYFGQKMKTARILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAENMLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGVETEVFFEVEADPTLSIVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHFEELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLADYALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHAMEAYVSVLASEFSDGQALQALKLLKEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLANALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKLLAWLETLKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQILLDTYYGRDYVEGETAAKKEAAPAKAEKKAKKSA", - "protein_translation_length": 891, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1242" - ], - [ - "gene_synonym", - "EcoGene:EG11342" - ], - [ - "gene_synonym", - "NP_415758.1" - ], - [ - "gene_synonym", - "ychE" - ], - [ - "gene_synonym", - "ECK1236" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25743" - ], - [ - "gene_synonym", - "GeneID:945836" - ], - [ - "gene_synonym", - "GI:16129203" - ], - [ - "gene_synonym", - "JW1229" - ], - [ - "gene_synonym", - "ASAP:ABE-0004168" - ] - ], - "dna_sequence": "GTGATTCAGACCTTTTTTGATTTTCCCGTTTACTTCAAATTTTTCATCGGGTTATTTGCGCTGGTCAACCCGGTAGGGATTATTCCCGTCTTTATCAGCATGACCAGTTATCAGACAGCGGCAGCGCGAAACAAAACTAACCTTACAGCCAACCTGTCTGTGGCCATTATCTTGTGGATCTCGCTTTTTCTCGGCGACACGATTCTACAACTTTTTGGTATATCAATTGATTCGTTCCGTATCGCCGGGGGTATCCTGGTGGTGACAATAGCGATGTCGATGATCAGCGGCAAGCTTGGCGAGGATAAACAGAACAAGCAAGAAAAATCAGAAACCGCGGTACGTGAAAGCATTGGTGTGGTGCCACTGGCGTTGCCGTTGATGGCGGGGCCAGGGGCGATCAGTTCTACCATCGTCTGGGGTACGCGTTATCACAGCATTAGCTATCTGTTTGGTTTCTTTGTGGCTATTGCATTGTTCGCTTTATGTTGTTGGGGATTGTTCCGCATGGCACCGTGGCTGGTACGGGTTTTACGCCAGACCGGCATCAACGTGATTACGCGTATTATGGGGCTATTGCTGATGGCATTGGGGATTGAATTTATCGTTACTGGTATTAAGGGGATTTTCCCCGGCCTGCTTAATTAA", - "dna_sequence_length": 648, - "functions": [ - "UPF0056 family inner membrane protein" - ], - "id": "CDS_1222", - "location": [ - [ - "NC_000913", - 1298598, - "+", - 648 - ] - ], - "md5": "f210e8cd219fbdd9c4099ef99d3f7b92", - "parent_gene": "", - "protein_md5": "dd86265da8cbbba869608551e89cf8e6", - "protein_translation": "MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALFALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN", - "protein_translation_length": 215, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945830" - ], - [ - "gene_synonym", - "b1243" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23843" - ], - [ - "gene_synonym", - "ASAP:ABE-0004172" - ], - [ - "gene_synonym", - "EcoGene:EG10674" - ], - [ - "gene_synonym", - "oppA" - ], - [ - "gene_synonym", - "ECK1237" - ], - [ - "gene_synonym", - "JW1235" - ], - [ - "gene_synonym", - "NP_415759.1" - ], - [ - "gene_synonym", - "GI:16129204" - ] - ], - "dna_sequence": "ATGACCAACATCACCAAGAGAAGTTTAGTAGCAGCTGGCGTTCTGGCTGCGCTAATGGCAGGGAATGTCGCGCTGGCAGCTGATGTACCCGCAGGCGTCACACTGGCGGAAAAACAAACACTGGTACGTAACAATGGTTCAGAAGTTCAGTCATTAGATCCGCACAAAATTGAAGGTGTTCCGGAGTCTAATATCAGCCGAGACCTGTTTGAAGGCTTACTGGTCAGCGATCTTGACGGTCATCCAGCACCTGGCGTCGCTGAATCCTGGGATAATAAAGACGCGAAAGTCTGGACCTTCCATTTGCGTAAAGATGCGAAATGGTCTGATGGCACGCCAGTCACAGCACAAGACTTTGTGTATAGCTGGCAACGTTCTGTTGATCCGAACACTGCTTCTCCGTATGCCAGTTATCTGCAATATGGGCATATCGCCGGTATTGATGAAATTCTTGAAGGGAAAAAACCGATTACCGATCTCGGCGTGAAAGCTATTGATGATCACACATTAGAAGTCACCTTAAGTGAACCCGTTCCGTACTTCTATAAATTACTTGTTCACCCATCAACTTCACCGGTGCCAAAAGCCGCTATCGAGAAATTCGGCGAAAAATGGACCCAGCCTGGTAATATCGTCACCAACGGTGCCTATACCTTAAAAGATTGGGTCGTAAACGAACGAATCGTTCTTGAACGCAGCCCGACCTACTGGAACAACGCGAAAACCGTTATTAACCAGGTAACCTATTTGCCTATTGCTTCTGAAGTTACCGATGTCAACCGCTACCGTAGTGGTGAAATCGACATGACGAATAACAGCATGCCGATCGAATTGTTCCAGAAGCTGAAAAAAGAGATCCCGGACGAAGTTCACGTTGATCCATACCTGTGCACTTACTATTACGAAATTAACAACCAGAAACCGCCATTCAACGATGTGCGTGTGCGTACCGCACTGAAACTAGGTATGGACCGCGATATCATTGTTAATAAAGTGAAAGCGCAGGGCAACATGCCCGCCTATGGTTACACTCCACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTATAACACCTCCGATCTGCATAAAAAGCTGGCGATTGCTGCCTCTTCATTGTGGAAGAAAAACATTGGTGTAAACGTCAAACTGGTTAACCAGGAGTGGAAAACGTTCCTCGACACCCGTCACCAGGGTACTTTTGATGTGGCCCGTGCAGGCTGGTGTGCTGACTACAACGAACCAACTTCCTTCCTGAACACCATGCTTTCGAACAGCTCGATGAATACCGCGCATTATAAGAGCCCGGCCTTTGACAGCATTATGGCGGAAACGCTGAAAGTGACTGACGAGGCGCAGCGCACAGCTCTGTACACTAAAGCAGAACAACAGCTGGATAAGGATTCGGCCATTGTTCCTGTTTATTACTACGTGAATGCGCGTCTGGTGAAACCGTGGGTTGGTGGCTATACCGGCAAAGATCCGCTGGATAATACCTATACCCGGAATATGTACATTGTGAAGCACTAA", - "dna_sequence_length": 1632, - "functions": [ - "oligopeptide ABC transporter periplasmic binding protein" - ], - "id": "CDS_1223", - "location": [ - [ - "NC_000913", - 1301182, - "+", - 1632 - ] - ], - "md5": "c48bc3dd919fb045c138c4c6a6960e5f", - "parent_gene": "", - "protein_md5": "1182f19cd9cfb577f30dfd6f2ec5d4de", - "protein_translation": "MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRNNGSEVQSLDPHKIEGVPESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHLRKDAKWSDGTPVTAQDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDLGVKAIDDHTLEVTLSEPVPYFYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYTLKDWVVNERIVLERSPTYWNNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTNNSMPIELFQKLKKEIPDEVHVDPYLCTYYYEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKAQGNMPAYGYTPPYTDGAKLTQPEWFGWSQEKRNEEAKKLLAEAGYTADKPLTINLLYNTSDLHKKLAIAASSLWKKNIGVNVKLVNQEWKTFLDTRHQGTFDVARAGWCADYNEPTSFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPVYYYVNARLVKPWVGGYTGKDPLDNTYTRNMYIVKH", - "protein_translation_length": 543, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1244" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFH2" - ], - [ - "gene_synonym", - "stkB" - ], - [ - "gene_synonym", - "EcoGene:EG10675" - ], - [ - "gene_synonym", - "ASAP:ABE-0004174" - ], - [ - "gene_synonym", - "oppB" - ], - [ - "gene_synonym", - "JW1236" - ], - [ - "gene_synonym", - "ECK1238" - ], - [ - "gene_synonym", - "GI:16129205" - ], - [ - "gene_synonym", - "NP_415760.1" - ], - [ - "gene_synonym", - "GeneID:945823" - ] - ], - "dna_sequence": "ATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGATCATGACACAGTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATACTGGGTGTTAGTGCTGGCGTTATTGCCGCATTAAAACAAAACACCAAATGGGACTATACCGTGATGGGGCTGGCAATGACCGGGGTTGTTATCCCCAGTTTTGTGGTTGCACCATTATTAGTCATGATATTTGCGATCATTTTGCATTGGCTGCCGGGCGGTGGCTGGAATGGTGGGGCGCTTAAATTCATGATATTGCCGATGGTGGCGTTGTCACTCGCTTATATCGCCAGTATTGCGCGTATTACCCGTGGCTCTATGATTGAAGTATTACACTCCAATTTTATTCGTACTGCCCGGGCGAAAGGGTTACCTATGCGGCGGATCATTTTACGTCACGCATTAAAACCTGCTCTGTTACCCGTGCTCTCTTATATGGGCCCCGCATTTGTCGGCATTATTACCGGTTCTATGGTTATCGAAACCATTTATGGTTTGCCGGGGATTGGACAACTGTTCGTTAATGGCGCATTGAACCGTGACTATTCCTTAGTGTTAAGCCTGACCATCCTGGTTGGTGCTTTAACCATTTTGTTTAATGCCATTGTCGATGTGCTATATGCGGTTATCGACCCGAAAATCCGTTACTGA", - "dna_sequence_length": 921, - "functions": [ - "oligopeptide ABC transporter permease" - ], - "id": "CDS_1224", - "location": [ - [ - "NC_000913", - 1302899, - "+", - 921 - ] - ], - "md5": "44a358810f049bdf3aa2081477f41080", - "parent_gene": "", - "protein_md5": "fb1b9639248c5e7e67eb5002d66c86e0", - "protein_translation": "MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVIDPKIRY", - "protein_translation_length": 306, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "stkB" - ], - [ - "gene_synonym", - "b1245" - ], - [ - "gene_synonym", - "ASAP:ABE-0004176" - ], - [ - "gene_synonym", - "EcoGene:EG10676" - ], - [ - "gene_synonym", - "GeneID:945810" - ], - [ - "gene_synonym", - "oppC" - ], - [ - "gene_synonym", - "JW1237" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFH6" - ], - [ - "gene_synonym", - "NP_415761.1" - ], - [ - "gene_synonym", - "ECK1239" - ], - [ - "gene_synonym", - "GI:16129206" - ] - ], - "dna_sequence": "ATGATGTTAAGTAAGAAAAACAGCGAGACGCTGGAAAATTTCAGTGAAAAGCTGGAGGTCGAAGGGCGCAGCTTGTGGCAGGACGCACGTCGACGTTTTATGCATAACCGTGCGGCGGTTGCCAGTCTGATAGTGCTGGTGCTGATCGCGTTATTTGTAATCCTGGCACCGATGCTTTCCCAGTTTGCCTATGACGATACTGACTGGGCGATGATGTCCAGCGCCCCGGATATGGAGTCCGGTCACTACTTTGGTACTGACTCATCCGGTCGCGACCTGCTTGTGCGCGTTGCGATTGGCGGGCGTATCTCACTCATGGTCGGTGTTGCTGCGGCACTGGTGGCTGTGGTCGTCGGGACACTTTATGGTTCGCTTTCCGGTTATCTGGGCGGTAAAGTGGATTCGGTAATGATGCGTCTGCTGGAAATCCTCAACTCCTTCCCATTCATGTTCTTCGTCATTTTGCTGGTGACCTTTTTCGGTCAAAACATCCTGCTGATTTTCGTGGCGATAGGCATGGTTTCCTGGCTGGATATGGCTCGTATTGTGCGTGGGCAAACCCTGAGTCTGAAGCGCAAAGAGTTTATTGAGGCGGCACAAGTTGGCGGTGTATCGACATCGGGCATTGTTATTCGCCACATTGTGCCGAATGTACTCGGTGTGGTGGTGGTCTACGCATCACTTCTGGTGCCCAGCATGATCCTCTTTGAATCTTTCCTTAGCTTCCTGGGGTTGGGTACGCAAGAGCCGTTAAGCAGCTGGGGTGCATTGCTGAGTGATGGCGCGAACTCGATGGAAGTCTCTCCATGGTTATTGTTGTTCCCAGCGGGATTCCTCGTGGTGACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAA", - "dna_sequence_length": 909, - "functions": [ - "oligopeptide ABC transporter 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"gene_synonym", - "GeneID:945802" - ], - [ - "gene_synonym", - "ECK1240" - ] - ], - "dna_sequence": "ATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCTTTAGTACCCCGGACGGCGACGTCACGGCGGTCAATGATTTGAATTTTTCCCTACGTGCCGGAGAAACGCTGGGTATTGTAGGTGAGTCTGGTTCGGGTAAATCGCAAACTGCATTTGCGTTGATGGGCCTGTTGGCTGCCAACGGACGTATTGGCGGATCGGCAACCTTCAATGGGCGTGAAATCCTCAATTTGCCAGAGCATGAACTCAATAAACTGCGCGCTGAACAAATCTCAATGATTTTTCAGGACCCAATGACTTCGTTGAATCCCTATATGCGCGTCGGTGAGCAGTTGATGGAAGTGCTGATGCTGCATAAGAACATGAGCAAAGCTGAGGCGTTTGAAGAGTCGGTGCGGATGCTCGATGCGGTAAAAATGCCGGAAGCGCGTAAACGCATGAAAATGTACCCGCACGAATTTTCTGGCGGCATGCGTCAGCGAGTCATGATTGCGATGGCCTTGTTATGTCGACCTAAGCTGCTGATTGCGGATGAACCAACAACTGCGCTGGACGTCACCGTACAGGCGCAGATCATGACGCTATTAAATGAACTGAAGCGGGAATTTAATACCGCCATCATTATGATCACCCACGATCTTGTCGTGGTGGCGGGGATCTGCGACAAAGTGCTGGTAATGTACGCCGGGCGCACGATGGAATATGGCAACGCGCGCGATGTCTTTTATCAACCCGTTCATCCTTATTCTATCGGTTTGCTCAACGCGGTGCCGCGTCTCGATGCGGAAGGTGAAACAATGTTGACCATCCCGGGTAATCCGCCAAACCTGCTGCGATTACCGAAAGGTTGCCCGTTCCAGCCACGTTGTCCGCATGCGATGGAAATTTGTAGTAGCGCACCGCCGCTGGAAGAGTTTACGCCTGGCCGTCTGCGTGCTTGCTTTAAACCGGTGGAGGAACTGTTATGA", 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"GI:16129208" - ], - [ - "gene_synonym", - "oppF" - ], - [ - "gene_synonym", - "GeneID:945818" - ], - [ - "gene_synonym", - "JW1239" - ], - [ - "gene_synonym", - "ASAP:ABE-0004182" - ] - ], - "dna_sequence": "ATGAATGCTGTAACTGAAGGAAGAAAAGTCCTCCTTGAAATCGCCGATCTTAAAGTGCACTTTGAAATCAAAGATGGCAAACAGTGGTTCTGGCAACCGCCGAAAACGCTCAAAGCCGTCGATGGTGTCACTCTTCGCCTGTATGAAGGGGAAACATTAGGTGTGGTAGGGGAATCGGGATGCGGTAAGTCCACCTTTGCTCGCGCCATCATCGGTTTGGTCAAGGCGACCGACGGTCATGTTGCCTGGTTAGGTAAAGAGTTGCTGGGCATGAAACCCGATGAATGGCGTGCCGTTCGCAGTGATATTCAGATGATTTTCCAGGATCCGTTGGCATCGCTAAACCCGCGTATGACCATCGGCGAGATCATCGCTGAACCACTGCGTACTTATCATCCGAAAATGTCACGCCAGGAAGTTCGCGAGCGCGTGAAGGCGATGATGCTGAAAGTCGGGTTATTGCCTAACCTGATTAACCGCTATCCGCATGAGTTCTCTGGTGGGCAGTGCCAGCGTATCGGGATTGCGCGTGCTCTTATTCTTGAACCGAAGCTGATTATCTGTGATGAGCCGGTGTCGGCGCTGGACGTGTCAATTCAGGCACAGGTGGTCAACCTGCTCCAGCAATTGCAACGTGAGATGGGATTGTCATTAATTTTTATCGCTCATGACCTGGCCGTGGTAAAACACATTTCCGATCGTGTGTTGGTGATGTATCTCGGCCATGCGGTAGAACTGGGGACCTATGATGAGGTCTACCACAATCCACTACATCCTTACACCAGGGCATTGATGTCGGCAGTCCCCATACCTGATCCGGATCTGGAGAAGAACAAAACCATCCAGTTACTGGAAGGGGAATTACCGTCGCCGATCAACCCGCCTTCCGGTTGTGTTTTCCGTACCCGTTGCCCGATTGCCGGTCCAGAGTGCGCCAAAACACGTCCTGTTCTGGAGGGGAGTTTCAGACACTCCGTTTCTTGCCTGAAAGTCGATCCGCTTTAA", - "dna_sequence_length": 1005, - "functions": [ - "oligopeptide ABC transporter ATPase" - ], - "id": "CDS_1227", - "location": [ - [ - "NC_000913", - 1305764, - "+", - 1005 - ] - ], - "md5": "eeb0feaef37b3a2390617890bb9c0549", - "parent_gene": "", - "protein_md5": "00e7ede67acdbbe25a5356620debb625", - "protein_translation": "MNAVTEGRKVLLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGKELLGMKPDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLEKNKTIQLLEGELPSPINPPSGCVFRTRCPIAGPECAKTRPVLEGSFRHSVSCLKVDPL", - "protein_translation_length": 334, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yciU" - ], - [ - "gene_synonym", - "JW1240" - ], - [ - "gene_synonym", - "ECK1242" - ], - [ - "gene_synonym", - "EcoGene:EG14256" - ], - [ - "gene_synonym", - "b1248" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8L7" - ], - [ - "gene_synonym", - "GeneID:945819" - ], - [ - "gene_synonym", - "NP_415764.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0004184" - ], - [ - "gene_synonym", - "GI:90111236" - ] - ], - "dna_sequence": "ATGGATATGGATCTAAACAATCGCCTGACTGAAGATGAAACGCTTGAACAGGCCTACGATATTTTTCTCGAACTGGCTGCCGACAATCTCGATCCAGCTGATGTTCTGCTGTTCAATCTTCAGTTTGAAGAGCGCGGCGGCGCGGAGTTATTCGATCCGGCGGAAGACTGGCAGGAACATGTTGATTTCGATTTGAACCCGGACTTTTTTGCCGAAGTGGTGATTGGTCTGGCGGACAGTGAAGATGGTGAAATCAACGATGTTTTTGCCCGCATTCTGTTATGCCGCGAAAAAGATCACAAACTTTGCCATATCATCTGGCGGGAATAA", - "dna_sequence_length": 330, - "functions": [ - "UPF0263 family protein" - ], - "id": "CDS_1228", - "location": [ - [ - "NC_000913", - 1307150, - "-", - 330 - ] - ], - "md5": "72b7e09f3ec550d031afcefc85859a64", - "parent_gene": "", - "protein_md5": "b7cf7c24afbdd6b77a39a81d93ce65da", - "protein_translation": "MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEERGGAELFDPAEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKLCHIIWRE", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945821" - ], - [ - "gene_synonym", - "ASAP:ABE-0004186" - ], - [ - "gene_synonym", - "GI:16129210" - ], - [ - "gene_synonym", - "ECK1243" - ], - [ - "gene_synonym", - "JW1241" - ], - [ - "gene_synonym", - "EcoGene:EG11608" - ], - [ - "gene_synonym", - "b1249" - ], - [ - "gene_synonym", - "clsA" - ], - [ - "gene_synonym", - "nov" - ], - [ - "gene_synonym", - "NP_415765.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6H8" - ], - [ - "gene_synonym", - "yciJ" - ], - [ - "gene_synonym", - "cls" - ] - ], - "dna_sequence": "ATGACAACCGTTTATACGTTGGTGAGTTGGTTGGCCATTCTGGGATACTGGTTGCTCATTGCAGGCGTAACTTTACGCATTCTAATGAAACGACGCGCAGTTCCCTCCGCGATGGCCTGGCTGTTGATTATTTACATTCTGCCGTTAGTCGGAATTATTGCCTATCTTGCCGTTGGCGAGCTCCATTTAGGCAAACGCCGCGCTGAGCGCGCCAGAGCGATGTGGCCTTCCACCGCAAAATGGCTTAACGACCTTAAAGCCTGTAAGCATATCTTCGCCGAAGAAAATAGCAGTGTCGCTGCGCCATTATTCAAGCTTTGCGAGCGTCGTCAGGGGATCGCTGGGGTCAAAGGGAATCAGCTACAACTGATGACCGAGTCAGATGATGTGATGCAGGCGTTAATCCGCGACATCCAGCTCGCGCGCCATAATATTGAGATGGTGTTTTATATCTGGCAGCCCGGCGGCATGGCGGACCAGGTGGCTGAATCATTAATGGCGGCTGCGCGACGCGGCATTCATTGCCGATTGATGCTCGACTCCGCCGGGAGTGTGGCTTTTTTCCGCAGCCCGTGGCCCGAGCTAATGCGTAATGCCGGTATTGAAGTGGTCGAAGCCTTAAAGGTCAATCTGATGCGTGTGTTTTTACGCCGTATGGACCTGCGCCAACATCGCAAGATGATCATGATCGATAATTACATCGCGTACACCGGCAGCATGAATATGGTCGATCCTCGCTACTTCAAACAAGATGCGGGCGTAGGGCAATGGATTGATCTGATGGCGCGTATGGAAGGCCCTATCGCCACCGCGATGGGGATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCCACCACCAGATGTCAATATTATGCCGTTTGAACAGGCCAGCGGTCACACCATTCACACAATTGCTTCTGGCCCCGGCTTTCCGGAAGATCTCATTCACCAGGCATTATTGACTGCGGCTTATTCGGCGCGTGAATATTTGATCATGACCACGCCCTACTTTGTGCCAAGCGATGATTTACTTCATGCGATTTGCACGGCGGCGCAGCGCGGGGTGGATGTCAGTATTATCCTTCCGCGAAAAAATGACTCGATGCTGGTCGGCTGGGCCAGTCGCGCATTCTTTACGGAACTGCTGGCTGCTGGGGTTAAAATTTATCAGTTTGAAGGCGGGTTACTGCATACCAAGAGCGTGCTGGTCGATGGCGAACTAAGTCTGGTTGGCACAGTTAACCTTGATATGCGTAGTCTGTGGCTAAATTTCGAGATTACCCTGGCAATCGACGATAAAGGTTTTGGTGCTGACCTCGCCGCCGTTCAGGACGATTATATTTCGCGTTCACGTCTGCTCGATGCCCGTTTATGGCTAAAACGTCCATTATGGCAACGTGTCGCCGAGCGACTGTTTTACTTCTTCAGTCCGTTGCTGTAA", - "dna_sequence_length": 1461, - "functions": [ - "cardiolipin synthase 1" - ], - "id": "CDS_1229", - "location": [ - [ - "NC_000913", - 1308645, - "-", - 1461 - ] - ], - "md5": "05cbf39bc11051d3b6ad90918a66d242", - "parent_gene": "", - "protein_md5": "6697711c6e912f9ee4c02921c93f6914", - "protein_translation": "MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLIIYILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAPLFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEMVFYIWQPGGMADQVAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRRMDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIYSCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAREYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAGVKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQDDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL", - "protein_translation_length": 486, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4595" - ], - [ - "gene_synonym", - "YP_001165316.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:A5A613" - ], - [ - "gene_synonym", - "EcoGene:EG14393" - ], - [ - "gene_synonym", - "yciY" - ], - [ - "gene_synonym", - "GeneID:5061502" - ], - [ - "gene_synonym", - "ECK4405" - ], - [ - "gene_synonym", - "GI:145698250" - ] - ], - "dna_sequence": "ATGAAGCGGAGTAGAACGGAAGTGGGGCGCTGGCGCATGCAGCGTCAGGCTAGCCGACGTAAATCGCGTTGGCTTGAGGGGCAATCGCGCCGAAATATGCGTATCCACAGCATCAGGAAGTGCATTCTAAACAAACAGCGTAACTCGTTATTGTTTGCGATCTACAATATCTAA", - "dna_sequence_length": 174, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1230", - "location": [ - [ - "NC_000913", - 1308788, - "+", - 174 - ] - ], - "md5": "7dbf5a1be6a798b8a024be32b9400f1e", - "parent_gene": "", - "protein_md5": "67679133f34257a8d49b1a7b916dfa53", - "protein_translation": "MKRSRTEVGRWRMQRQASRRKSRWLEGQSRRNMRIHSIRKCILNKQRNSLLFAIYNI", - "protein_translation_length": 57, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415766.1" - ], - [ - "gene_synonym", - "ECK1244" - ], - [ - "gene_synonym", - "EcoGene:EG11606" - ], - [ - "gene_synonym", - "JW1242" - ], - [ - "gene_synonym", - "b1250" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31069" - ], - [ - "gene_synonym", - "kch" - ], - [ - "gene_synonym", - "ASAP:ABE-0004189" - ], - [ - "gene_synonym", - "GI:16129211" - ], - [ - "gene_synonym", - "GeneID:945841" - ] - ], - "dna_sequence": "GTGAGTCACTGGGCTACATTCAAACAAACAGCAACAAATTTATGGGTGACCCTTCGGCACGACATTCTCGCGCTGGCCGTCTTTTTAAATGGATTGCTTATTTTTAAAACAATCTATGGTATGTCGGTCAATTTGCTTGATATTTTCCATATCAAAGCATTTTCAGAGTTGGATCTCTCCTTGCTGGCAAACGCCCCACTCTTTATGCTCGGCGTCTTTCTTGTCCTGAACTCCATTGGCTTACTGTTCCGGGCAAAGCTCGCATGGGCAATCAGTATCATTTTGTTGTTGATAGCGCTAATTTACACCCTGCATTTTTATCCCTGGCTGAAATTTAGTATTGGATTTTGCATTTTTACGCTGGTGTTTTTGCTGATACTGCGCAAAGACTTCTCCCACAGTAGCGCCGCAGCCGGGACAATTTTTGCATTTATTAGTTTCACGACATTACTGTTTTACTCAACCTACGGTGCGCTTTATTTAAGCGAAGGTTTTAATCCGCGAATAGAAAGTTTGATGACCGCGTTCTATTTTTCGATAGAAACCATGTCAACCGTCGGCTATGGCGATATTGTCCCTGTTTCTGAATCAGCACGATTGTTCACTATTTCGGTCATTATTTCCGGCATTACCGTTTTTGCCACATCTATGACCTCAATTTTTGGTCCGCTTATCCGCGGGGGATTCAACAAACTTGTAAAAGGAAACAATCATACAATGCATCGTAAAGATCATTTTATTGTTTGCGGACATTCGATTCTCGCCATCAATACGATCCTGCAACTGAATCAACGCGGACAAAACGTAACGGTTATCAGCAACTTGCCTGAAGATGATATCAAGCAACTTGAGCAACGCTTAGGCGATAATGCTGATGTTATCCCCGGTGACAGTAATGACAGTTCTGTATTAAAGAAAGCGGGAATCGATCGTTGCCGGGCCATTCTGGCGCTGAGTGATAACGATGCAGATAACGCGTTTGTTGTACTCTCGGCAAAAGATATGAGCAGTGATGTCAAAACAGTTCTCGCCGTCAGTGATAGCAAAAACCTGAATAAGATTAAGATGGTACATCCGGATATCATTCTCTCACCGCAACTGTTTGGCAGCGAAATTCTGGCGCGAGTTTTAAATGGTGAAGAGATTAATAATGATATGCTCGTTTCAATGTTGTTGAACTCAGGTCATGGTATTTTCAGCGATAACGATGAACTAGAAACGAAAGCTGACAGTAAAGAATCGGCGCAAAAATAG", 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"gene_synonym", - "GeneID:949085" - ], - [ - "gene_synonym", - "NP_415767.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB55" - ], - [ - "gene_synonym", - "ASAP:ABE-0004192" - ], - [ - "gene_synonym", - "yciI" - ], - [ - "gene_synonym", - "GI:90111237" - ] - ], - "dna_sequence": "GTGTTGTATGTTATTTACGCTCAAGACAAAGCTGATAGCCTCGAAAAACGCCTTTCCGTTCGTCCGGCACATTTAGCACGTTTACAGTTACTGCATGATGAAGGTCGTTTGTTGACAGCTGGTCCAATGCCAGCGGTAGACAGTAACGATCCAGGGGCTGCGGGATTTACTGGCTCAACCGTTATTGCTGAATTTGAATCGCTGGAAGCAGCTCAGGCCTGGGCCGATGCTGACCCGTACGTAGCGGCAGGAGTCTATGAACACGTTTCAGTGAAACCATTTAAGAAAGTGTTCTGA", - "dna_sequence_length": 297, - "functions": [ - "putative DGPF domain-containing enzyme" - ], - "id": "CDS_1232", - "location": [ - [ - "NC_000913", - 1310865, - "-", - 297 - ] - ], - "md5": "6246ac585ac81e0bb57c352ec8f21490", - "parent_gene": "", - "protein_md5": "a1fec884fbd293ee94fe6eaf5b7f10c7", - "protein_translation": 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"ATGACCCTTGATTTACCTCGCCGCTTCCCCTGGCCGACGTTACTTTCGGTCTGCATTCATGGTGCTGTTGTGGCGGGTCTGCTCTATACCTCGGTACATCAGGTTATTGAACTACCTGCGCCTGCGCAGCCGATTTCTGTCACGATGGTTACGCCTGCTGATCTCGAACCGCCACAAGCCGTTCAGCCGCCACCGGAGCCGGTGGTAGAGCCAGAACCGGAACCTGAGCCGATCCCCGAACCGCCAAAAGAAGCACCGGTGGTCATTGAAAAGCCGAAGCCGAAACCTAAGCCAAAACCGAAGCCGGTGAAAAAGGTACAGGAGCAGCCAAAACGCGATGTCAAACCCGTAGAGTCGCGTCCGGCATCACCGTTTGAAAATACGGCACCGGCACGCCTGACATCAAGTACAGCAACGGCTGCAACCAGCAAGCCGGTTACCAGTGTGGCTTCAGGACCACGCGCATTAAGCCGTAATCAGCCGCAGTATCCGGCACGAGCACAGGCATTGCGCATTGAAGGGCAGGTTAAAGTTAAATTTGACGTTACGCCGGATGGTCGCGTGGATAACGTACAAATCCTCTCAGCCAAGCCTGCGAACATGTTTGAGCGTGAGGTGAAAAATGCGATGCGCAGATGGCGTTATGAGCCGGGTAAGCCAGGCAGTGGGATTGTGGTGAATATCCTGTTTAAAATTAACGGCACCACCGAAATTCAGTAA", - "dna_sequence_length": 720, - "functions": [ - "membrane spanning protein in TonB-ExbB-ExbD transport complex" - ], - "id": "CDS_1233", - "location": [ - [ - "NC_000913", - 1311089, - "+", - 720 - ] - ], - "md5": "e3f5b28b2863fb47e551ca05d1abe9ab", - "parent_gene": "", - "protein_md5": "7c2fb99fde3d05cc6e84a2308a9085cf", - "protein_translation": "MTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVTPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPARLTSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPGKPGSGIVVNILFKINGTTEIQ", - "protein_translation_length": 239, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1247" - ], - [ - "gene_synonym", - "NP_415769.1" - ], - [ - "gene_synonym", - "b1253" - ], - [ - "gene_synonym", - "GeneID:946634" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8Z0" - ], - [ - "gene_synonym", - "EcoGene:EG11121" - ], - [ - "gene_synonym", - "JW1245" - ], - [ - "gene_synonym", - "yciA" - ], - [ - "gene_synonym", - "ASAP:ABE-0004198" - ], - [ - "gene_synonym", - "GI:16129214" - ] - ], - "dna_sequence": "ATGTCTACAACACATAACGTCCCTCAGGGCGATCTTGTTTTACGTACTTTAGCCATGCCCGCCGATACCAATGCCAATGGTGACATCTTTGGTGGTTGGTTAATGTCACAAATGGATATTGGCGGCGCTATTCTGGCAAAAGAAATTGCCCACGGTCGCGTAGTGACTGTGCGGGTTGAAGGAATGACTTTCTTACGGCCGGTTGCGGTCGGCGATGTGGTGTGCTGCTATGCACGCTGTGTCCAGAAAGGGACGACATCGGTCAGCATTAATATTGAAGTGTGGGTGAAAAAAGTAGCGTCTGAACCAATTGGGCAACGCTATAAAGCGACAGAAGCATTATTTAAGTATGTCGCGGTTGATCCTGAAGGAAAACCTCGCGCCTTACCTGTTGAGTAA", - "dna_sequence_length": 399, - "functions": [ - "acyl-CoA esterase" - ], - "id": "CDS_1234", - "location": [ - [ - "NC_000913", - 1312246, - "-", - 399 - ] - ], - "md5": "4e9970a8d5d4b3c32ec155f3d669a766", - "parent_gene": "", - "protein_md5": "e95dcf69c366ac7c00165adc12060f86", - "protein_translation": "MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASEPIGQRYKATEALFKYVAVDPEGKPRALPVE", - "protein_translation_length": 132, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1246" - ], - [ - "gene_synonym", - "b1254" - ], - [ - "gene_synonym", - "GeneID:946228" - ], - [ - "gene_synonym", - "ispZ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A710" - ], - [ - "gene_synonym", - "ECK1248" - ], - [ - "gene_synonym", - "EcoGene:EG11122" - ], - [ - "gene_synonym", - "yciB" - ], - [ - "gene_synonym", - "ASAP:ABE-0004200" - ], - [ - "gene_synonym", - "ispA" - ], - [ - "gene_synonym", - "GI:16129215" - ], - [ - "gene_synonym", - "NP_415770.1" - ] - ], - "dna_sequence": "ATGAAGCAGTTTCTTGATTTTTTACCGCTGGTTGTCTTTTTCGCGTTTTACAAGATTTATGACATCTATGCGGCTACTGCGGCGCTGATCGTCGCCACGGCGATTGTGCTTATCTATAGCTGGGTTCGCTTTCGTAAGGTTGAGAAGATGGCCCTGATCACTTTTGTTCTGGTGGTCGTCTTCGGTGGCTTGACGCTGTTCTTCCACAATGATGAGTTTATTAAATGGAAGGTTACTGTCATTTATGCTCTATTTGCGGGAGCCCTGTTAGTCAGCCAATGGGTGATGAAAAAGCCGCTAATTCAGCGGATGCTGGGTAAAGAACTCACGCTGCCGCAACCGGTATGGTCGAAGCTGAATCTGGCCTGGGCTGTTTTCTTTATCCTTTGCGGTCTGGCAAACATCTACATCGCATTCTGGCTGCCGCAAAATATTTGGGTCAACTTTAAAGTCTTTGGCCTGACCGCCCTTACCTTAATCTTCACATTGTTAAGCGGTATCTATATCTACCGCCACATGCCGCAGGAAGATAAATCCTAA", - 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"ASAP:ABE-0004204" - ] - ], - "dna_sequence": "ATGTCTATCACGGCGCAGTCCGTATACCGTGACACCGGAAATTTCTTCCGTAATCAATTTATGACCATTCTGTTGGTATCGTTGCTATGTGCGTTTATCACAGTGGTGTTAGGGCATGTTTTCTCACCCAGTGATGCACAGCTTGCGCAGCTCAATGACGGCGTGCCCGTTAGCGGCAGTAGTGGGTTGTTCGACCTGGTTCAGAATATGTCACCGGAACAGCAACAAATTTTGCTGCAGGCTTCAGCGGCGTCCACTTTTTCAGGATTAATCGGTAACGCCATTCTCGCCGGAGGCGTAATATTAATTATCCAGCTGGTGTCTGCGGGTCAGAGAGTCAGTGCGCTGCGAGCTATTGGTGCCAGTGCGCCGATATTGCCAAAGTTATTTATTCTGATTTTTCTGACTACCCTTTTAGTACAGATTGGCATCATGCTGGTGGTCGTTCCGGGAATTATCATGGCCATTTTACTGGCCCTGGCACCGGTGATGTTGGTACAGGACAAAATGGGCGTTTTTGCCTCGATGCGTAGCAGTATGCGGCTGACTTGGGCGAATATGCGTCTGGTGGCACCCGCAGTACTGAGCTGGTTGCTGGCAAAAACACTGTTGCTGCTTTTTGCCTCTTCTTTTGCCGCATTAACCCCGGAAATTGGTGCCGTACTGGCGAACACCTTGAGCAACCTGATTTCAGCCATATTGCTCATCTATCTGTTCCGCCTGTATATGTTGATTCGCCAATAA", - "dna_sequence_length": 744, - "functions": [ - "UPF0259 family inner membrane protein" - ], - "id": "CDS_1236", - "location": [ - [ - "NC_000913", - 1313663, - "-", - 744 - ] - ], - "md5": "2a9c988c4d05401826097e73141593ab", - "parent_gene": "", - "protein_md5": "fa05d62c41789a91e0a75e6318242768", - "protein_translation": "MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPSDAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVILIIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLALAPVMLVQDKMGVFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEIGAVLANTLSNLISAILLIYLFRLYMLIRQ", - "protein_translation_length": 247, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1250" - ], - [ - "gene_synonym", - "b1256" - ], - [ - "gene_synonym", - "NP_415772.1" - ], - [ - "gene_synonym", - "GeneID:945128" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A915" - ], - [ - "gene_synonym", - "JW1248" - ], - [ - "gene_synonym", - "ompW" - ], - [ - "gene_synonym", - "yciD" - ], - [ - "gene_synonym", - "EcoGene:EG11124" - ], - [ - "gene_synonym", - "GI:16129217" - ], - [ - "gene_synonym", - "ASAP:ABE-0004210" - ] - ], - "dna_sequence": "ATGAAAAAGTTAACAGTGGCGGCTTTGGCAGTAACAACTCTTCTCTCTGGCAGTGCCTTTGCGCATGAAGCAGGCGAATTTTTTATGCGTGCAGGTTCTGCAACCGTACGTCCAACAGAAGGTGCTGGTGGTACGTTAGGAAGTCTGGGTGGATTCAGCGTGACCAATAACACGCAACTGGGCCTTACGTTTACTTATATGGCGACCGACAACATTGGTGTGGAATTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCGTTCATCATCTGCCACCAACACTGATGGCGCAGTGGTATTTTGGTGATGCCAGCAGCAAATTCCGTCCTTACGTTGGGGCAGGTATTAACTACACCACCTTCTTTGATAATGGATTTAACGATCATGGCAAAGAGGCAGGGCTTTCCGATCTCAGTCTGAAAGATTCCTGGGGAGCTGCCGGGCAGGTGGGGGTTGATTATCTGATTAACCGTGACTGGTTGGTTAACATGTCAGTGTGGTACATGGATATCGATACCACCGCCAATTATAAGCTGGGCGGTGCACAGCAACACGATAGCGTACGCCTCGATCCGTGGGTGTTTATGTTCTCAGCAGGATATCGTTTTTAA", - "dna_sequence_length": 639, - "functions": [ - "outer membrane protein W" - ], - "id": "CDS_1237", - "location": [ - [ - "NC_000913", - 1314020, - "+", - 639 - ] - ], - "md5": "f07881561ed0662d79670ccc23a53292", - "parent_gene": "", - "protein_md5": "6dd1d92415e620b86e62141ad0579296", - "protein_translation": "MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGGTLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF", - "protein_translation_length": 212, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1257" - ], - [ - "gene_synonym", - "ECK1251" - ], - [ - "gene_synonym", - "GeneID:946871" - ], - [ - "gene_synonym", - "JW1249" - ], - [ - "gene_synonym", - "yciE" - ], - [ - "gene_synonym", - "GI:16129218" - ], - [ - "gene_synonym", - "EcoGene:EG11125" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21363" - ], - [ - "gene_synonym", - "NP_415773.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004212" - ] - ], - "dna_sequence": "ATGAATCGTATTGAACATTATCATGACTGGTTACGTGACGCCCACGCAATGGAAAAGCAAGCCGAATCTATGCTTGAATCCATGGCCAGCCGTATAGATAATTATCCTGAACTACGCGCTCGTATTGAACAACATCTTAGTGAAACCAAAAACCAGATTGTTCAACTGGAAACTATTCTTGATCGTAATGACATTTCACGTTCAGTCATTAAAGATTCCATGAGTAAAATGGCTGCGCTTGGGCAGTCAATCGGTGGTATATTCCCTTCTGATGAAATAGTCAAAGGCTCTATTAGCGGATATGTCTTCGAGCAATTTGAAATCGCCTGTTACACCTCACTATTAGCAGCAGCAAAAAATGCCGGTGATACAGCTTCAATTCCAACCATCGAAGCGATTTTAAATGAGGAAAAGCAAATGGCCGACTGGCTGATTCAGAATATTCCGCAAACAACTGAGAAATTTTTAATTCGCTCTGAAACTGATGGCGTAGAAGCGAAGAAATAA", - "dna_sequence_length": 507, - "functions": [ - "putative rubrerythrin/ferritin-like metal-binding protein" - ], - "id": "CDS_1238", - "location": [ - [ - "NC_000913", - 1315224, - "-", - 507 - ] - ], - "md5": "3b685dbe9b7f0fa027d4c1a1c46a66b6", - "parent_gene": "", - "protein_md5": "5e876b2c040d02e51b8211de91219860", - "protein_translation": "MNRIEHYHDWLRDAHAMEKQAESMLESMASRIDNYPELRARIEQHLSETKNQIVQLETILDRNDISRSVIKDSMSKMAALGQSIGGIFPSDEIVKGSISGYVFEQFEIACYTSLLAAAKNAGDTASIPTIEAILNEEKQMADWLIQNIPQTTEKFLIRSETDGVEAKK", - "protein_translation_length": 168, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1252" - ], - [ - "gene_synonym", - "JW1250" - ], - [ - "gene_synonym", - "NP_415774.1" - ], - [ - "gene_synonym", - "GeneID:947133" - ], - [ - "gene_synonym", - "b1258" - ], - [ - "gene_synonym", - "yciF" - ], - [ - "gene_synonym", - "GI:16129219" - ], - [ - "gene_synonym", - "ASAP:ABE-0004222" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21362" - ], - [ - "gene_synonym", - "EcoGene:EG11126" - ] - ], - "dna_sequence": "ATGAATATGAAGACCATTGAAGATGTATTTATTCACCTGCTTTCAGATACCTACAGCGCAGAAAAACAATTAACCCGGGCACTGGCAAAACTCGCAAGAGCAACATCAAATGAAAAATTAAGTCAGGCTTTTCATGCGCACCTCGAGGAAACTCATGGACAGATTGAACGTATTGATCAAGTTGTGGAGTCCGAATCGAACCTGAAAATTAAGCGCATGAAATGTGTGGCAATGGAAGGTCTTATTGAAGAAGCTAATGAGGTCATCGAAAGTACCGAGAAAAACGAAGTGCGTGATGCCGCACTGATTGCCGCAGCACAGAAAGTCGAGCATTATGAGATTGCCAGTTACGGGACATTAGCGACGCTGGCTGAACAATTAGGTTACCGTAAAGCAGCGAAGCTTCTGAAAGAAACCCTGGAAGAAGAAAAGGCCACCGACATCAAACTGACTGATCTGGCCATTAATAACGTAAATAAGAAAGCCGAAAATAAAGCCTGA", - "dna_sequence_length": 501, - "functions": [ - "putative rubrerythrin/ferritin-like metal-binding protein" - ], - "id": "CDS_1239", - "location": [ - [ - "NC_000913", - 1315770, - "-", - 501 - ] - ], - "md5": "1105a6dce11d5898bc10253b000e1851", - "parent_gene": "", - "protein_md5": "ba6041c09b74a8a96f61c7c64f2c02b8", - "protein_translation": "MNMKTIEDVFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKRMKCVAMEGLIEEANEVIESTEKNEVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLAINNVNKKAENKA", - "protein_translation_length": 166, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1253" - ], - [ - "gene_synonym", - "JW1251" - ], - [ - "gene_synonym", - "GI:90111238" - ], - [ - "gene_synonym", - "b1259" - ], - [ - "gene_synonym", - "yciG" - ], - [ - "gene_synonym", - "NP_415775.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21361" - ], - [ - "gene_synonym", - "EcoGene:EG11127" - ], - [ - "gene_synonym", - "GeneID:947489" - ], - [ - "gene_synonym", - "ASAP:ABE-0004229" - ] - ], - "dna_sequence": "ATGGCCGAACATCGTGGTGGTTCAGGAAATTTCGCCGAAGACCGTGAGAAGGCATCCGACGCAGGCCGTAAAGGCGGTCAGCATAGCGGCGGTAATTTTAAAAATGATCCGCAACGCGCATCTGAAGCGGGTAAAAAAGGCGGTCAACAAAGCGGTGGTAATAAATCAGGCAAATCCTGA", - "dna_sequence_length": 180, - "functions": [ - "KGG family protein" - ], - "id": "CDS_1240", - "location": [ - [ - "NC_000913", - 1316035, - "-", - 180 - ] - ], - "md5": "7c55da7c40f15e6f1411b80d0e153fa4", - "parent_gene": "", - "protein_md5": "ec654bea684d593746da27b5cc2c198e", - "protein_translation": "MAEHRGGSGNFAEDREKASDAGRKGGQHSGGNFKNDPQRASEAGKKGGQQSGGNKSGKS", - "protein_translation_length": 59, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A877" - ], - [ - "gene_synonym", - "NP_415776.1" - ], - [ - "gene_synonym", - "GeneID:946204" - ], - [ - "gene_synonym", - "ECK1254" - ], - [ - "gene_synonym", - "JW1252" - ], - [ - "gene_synonym", - "EcoGene:EG11024" - ], - [ - "gene_synonym", - "trpA" - ], - [ - "gene_synonym", - "b1260" - ], - [ - "gene_synonym", - "tryp" - ], - [ - "gene_synonym", - "try" - ], - [ - "gene_synonym", - "GI:16129221" - ], - [ - "gene_synonym", - "ASAP:ABE-0004232" - ] - ], - "dna_sequence": "ATGGAACGCTACGAATCTCTGTTTGCCCAGTTGAAGGAGCGCAAAGAAGGCGCATTCGTTCCTTTCGTCACGCTCGGTGATCCGGGCATTGAGCAGTCATTGAAAATTATCGATACGCTAATTGAAGCCGGTGCTGACGCGCTGGAGTTAGGTATCCCCTTCTCCGACCCACTGGCGGATGGCCCGACGATTCAAAACGCCACTCTGCGCGCCTTTGCGGCAGGTGTGACTCCGGCACAATGTTTTGAAATGCTGGCACTGATTCGCCAGAAACACCCGACCATTCCCATTGGCCTGTTGATGTATGCCAATCTGGTGTTTAACAAAGGCATTGATGAGTTTTATGCCCAGTGCGAAAAAGTCGGCGTCGATTCGGTGCTGGTTGCCGATGTGCCAGTTGAAGAGTCCGCGCCCTTCCGCCAGGCCGCGTTGCGTCATAATGTCGCACCTATCTTCATCTGCCCGCCAAATGCCGATGACGACCTGCTGCGCCAGATAGCCTCTTACGGTCGTGGTTACACCTATTTGCTGTCACGAGCAGGCGTGACCGGCGCAGAAAACCGCGCCGCGTTACCCCTCAATCATCTGGTTGCGAAGCTGAAAGAGTACAACGCTGCACCTCCATTGCAGGGATTTGGTATTTCCGCCCCGGATCAGGTAAAAGCAGCGATTGATGCAGGAGCTGCGGGCGCGATTTCTGGTTCGGCCATTGTTAAAATCATCGAGCAACATATTAATGAGCCAGAGAAAATGCTGGCGGCACTGAAAGTTTTTGTACAACCGATGAAAGCGGCGACGCGCAGTTAA", - "dna_sequence_length": 807, - "functions": [ - "tryptophan synthase, alpha subunit" - ], - "id": "CDS_1241", - "location": [ - [ - "NC_000913", - 1317222, - "-", - 807 - ] - ], - "md5": "eec06239d384d7ca717282dbe5545e74", - "parent_gene": "", - "protein_md5": "1f1188d5fb1c600b0f1c9e3dd8f05eb8", - "protein_translation": "MERYESLFAQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMYANLVFNKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAATRS", - "protein_translation_length": 268, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1253" - ], - [ - "gene_synonym", - "NP_415777.1" - ], - [ - "gene_synonym", - "ECK1255" - ], - [ - "gene_synonym", - "trpB" - ], - [ - "gene_synonym", - "b1261" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A879" - ], - [ - "gene_synonym", - "GI:16129222" - ], - [ - "gene_synonym", - "EcoGene:EG11025" - ], - [ - "gene_synonym", - "ASAP:ABE-0004234" - ], - [ - "gene_synonym", - "GeneID:945768" - ] - ], - "dna_sequence": "ATGACAACATTACTTAACCCCTATTTTGGTGAGTTTGGCGGCATGTACGTGCCACAAATCCTGATGCCTGCTCTGCGCCAGCTGGAAGAAGCTTTTGTCAGTGCGCAAAAAGATCCTGAATTTCAGGCTCAGTTCAACGACCTGCTGAAAAACTATGCCGGGCGTCCAACCGCGCTGACCAAATGCCAGAACATTACAGCCGGGACGAACACCACGCTGTATCTCAAGCGTGAAGATTTGCTGCACGGCGGCGCGCATAAAACTAACCAGGTGCTGGGGCAGGCGTTGCTGGCGAAGCGGATGGGTAAAACCGAAATCATCGCCGAAACCGGTGCCGGTCAGCATGGCGTGGCGTCGGCCCTTGCCAGCGCCCTGCTCGGCCTGAAATGCCGTATTTATATGGGTGCCAAAGACGTTGAACGCCAGTCGCCTAACGTTTTTCGTATGCGCTTAATGGGTGCGGAAGTGATCCCGGTGCATAGCGGTTCCGCGACGCTGAAAGATGCCTGTAACGAGGCGCTGCGCGACTGGTCCGGTAGTTACGAAACCGCGCACTATATGCTGGGCACCGCAGCTGGCCCGCATCCTTATCCGACCATTGTGCGTGAGTTTCAGCGGATGATTGGCGAAGAAACCAAAGCGCAGATTCTGGAAAGAGAAGGTCGCCTGCCGGATGCCGTTATCGCCTGTGTTGGCGGCGGTTCGAATGCCATCGGCATGTTTGCTGATTTCATCAATGAAACCAACGTCGGCCTGATTGGTGTGGAGCCAGGTGGTCACGGTATCGAAACTGGCGAGCACGGCGCACCGCTAAAACATGGTCGCGTGGGTATCTATTTCGGTATGAAAGCGCCGATGATGCAAACCGAAGACGGGCAGATTGAAGAATCTTACTCCATCTCCGCCGGACTGGATTTCCCGTCTGTCGGCCCACAACACGCGTATCTTAACAGCACTGGACGCGCTGATTACGTGTCTATTACCGATGATGAAGCCCTTGAAGCCTTCAAAACGCTGTGCCTGCACGAAGGGATCATCCCGGCGCTGGAATCCTCCCACGCCCTGGCCCATGCGTTGAAAATGATGCGCGAAAACCCGGATAAAGAGCAGCTACTGGTGGTTAACCTTTCCGGTCGCGGCGATAAAGACATCTTCACCGTTCACGATATTTTGAAAGCACGAGGGGAAATCTGA", - "dna_sequence_length": 1194, - "functions": [ - "tryptophan synthase, beta subunit" - ], - "id": "CDS_1242", - "location": [ - [ - "NC_000913", - 1318415, - "-", - 1194 - ] - ], - "md5": "27801a4f146a7294744ed15dc5a53803", - "parent_gene": "", - "protein_md5": "6928ee6ba77b77478258aa92b0d2de90", - "protein_translation": "MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQFNDLLKNYAGRPTALTKCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILEREGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALEAFKTLCLHEGIIPALESSHALAHALKMMRENPDKEQLLVVNLSGRGDKDIFTVHDILKARGEI", - "protein_translation_length": 397, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945519" - ], - [ - "gene_synonym", - "JW1254" - ], - [ - "gene_synonym", - "ECK1256" - ], - [ - "gene_synonym", - "trpC" - ], - [ - "gene_synonym", - "EcoGene:EG11026" - ], - [ - "gene_synonym", - "trpF" - ], - [ - "gene_synonym", - "b1262" - ], - [ - "gene_synonym", - "NP_415778.3" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00909" - ], - [ - "gene_synonym", - "GI:635341464" - ], - [ - "gene_synonym", - "ASAP:ABE-0004238" - ] - ], - "dna_sequence": "ATGATGCAAACCGTTTTAGCGAAAATCGTCGCAGACAAGGCGATTTGGGTAGAAGCCCGCAAACAGCAGCAACCGCTGGCCAGTTTTCAGAATGAGGTTCAGCCGAGCACGCGACATTTTTATGATGCGCTACAGGGTGCGCGCACGGCGTTTATTCTGGAGTGCAAGAAAGCGTCGCCGTCAAAAGGCGTGATCCGTGATGATTTCGATCCAGCACGCATTGCCGCCATTTATAAACATTACGCTTCGGCAATTTCGGTGCTGACTGATGAGAAATATTTTCAGGGGAGCTTTAATTTCCTCCCCATCGTCAGCCAAATCGCCCCGCAGCCGATTTTATGTAAAGACTTCATTATCGACCCTTACCAGATCTATCTGGCGCGCTATTACCAGGCCGATGCCTGCTTATTAATGCTTTCAGTACTGGATGACGACCAATATCGCCAGCTTGCCGCCGTCGCTCACAGTCTGGAGATGGGGGTGCTGACCGAAGTCAGTAATGAAGAGGAACAGGAGCGCGCCATTGCATTGGGAGCAAAGGTCGTTGGCATCAACAACCGCGATCTGCGTGATTTGTCGATTGATCTCAACCGTACCCGCGAGCTTGCGCCGAAACTGGGGCACAACGTGACGGTAATCAGCGAATCCGGCATCAATACTTACGCTCAGGTGCGCGAGTTAAGCCACTTCGCTAACGGTTTTCTGATTGGTTCGGCGTTGATGGCCCATGACGATTTGCACGCCGCCGTGCGCCGGGTGTTGCTGGGTGAGAATAAAGTATGTGGCCTGACGCGTGGGCAAGATGCTAAAGCAGCTTATGACGCGGGCGCGATTTACGGTGGGTTGATTTTTGTTGCGACATCACCGCGTTGCGTCAACGTTGAACAGGCGCAGGAAGTGATGGCTGCGGCACCGTTGCAGTATGTTGGCGTGTTCCGCAATCACGATATTGCCGATGTGGTGGACAAAGCTAAGGTGTTATCGCTGGCGGCAGTGCAACTGCATGGTAATGAAGAACAGCTGTATATCGATACGCTGCGTGAAGCTCTGCCAGCACATGTTGCCATCTGGAAAGCATTAAGCGTCGGTGAAACCCTGCCCGCCCGCGAGTTTCAGCACGTTGATAAATATGTTTTAGACAACGGCCAGGGTGGAAGCGGGCAACGTTTTGACTGGTCACTATTAAATGGTCAATCGCTTGGCAACGTTCTGCTGGCGGGGGGCTTAGGCGCAGATAACTGCGTGGAAGCGGCACAAACCGGCTGCGCCGGACTTGATTTTAATTCTGCTGTAGAGTCGCAACCGGGCATCAAAGACGCACGTCTTTTGGCCTCGGTTTTCCAGACGCTGCGCGCATATTAA", - "dna_sequence_length": 1362, - "functions": [ - "indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase" - ], - "id": "CDS_1243", - "location": [ - [ - "NC_000913", - 1319788, - "-", - 1362 - ] - ], - "md5": "df8193e1c5a87d0dab540fc39f705a77", - "parent_gene": "", - "protein_md5": "f7865ba4aca1dcee0fe409b75a7657e2", - "protein_translation": "MMQTVLAKIVADKAIWVEARKQQQPLASFQNEVQPSTRHFYDALQGARTAFILECKKASPSKGVIRDDFDPARIAAIYKHYASAISVLTDEKYFQGSFNFLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAGAIYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLHGNEEQLYIDTLREALPAHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQRFDWSLLNGQSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDARLLASVFQTLRAY", - "protein_translation_length": 453, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1255" - ], - [ - "gene_synonym", - "NP_415779.1" - ], - [ - "gene_synonym", - "ECK1257" - ], - [ - "gene_synonym", - "GeneID:945109" - ], - [ - "gene_synonym", - "EcoGene:EG11027" - ], - [ - "gene_synonym", - "trpD" - ], - [ - "gene_synonym", - "b1263" - ], - [ - "gene_synonym", - "GI:16129224" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00904" - ], - [ - "gene_synonym", - "trpGD" - ], - [ - "gene_synonym", - "ASAP:ABE-0004241" - ] - ], - "dna_sequence": "ATGGCTGACATTCTGCTGCTCGATAATATCGACTCTTTTACGTACAACCTGGCAGATCAGTTGCGCAGCAATGGGCATAACGTGGTGATTTACCGCAACCATATTCCGGCGCAAACCTTAATTGAACGCCTGGCGACCATGAGCAATCCGGTGCTGATGCTTTCTCCTGGCCCCGGTGTGCCGAGCGAAGCCGGTTGTATGCCGGAACTCCTCACCCGCTTGCGTGGCAAGCTGCCCATTATTGGCATTTGCCTCGGACATCAGGCGATTGTCGAAGCTTACGGGGGCTATGTCGGTCAGGCGGGCGAAATTCTCCACGGTAAAGCCTCCAGCATTGAACATGACGGTCAGGCGATGTTTGCCGGATTAACAAACCCGCTGCCGGTGGCGCGTTATCACTCGCTGGTTGGCAGTAACATTCCGGCCGGTTTAACCATCAACGCCCATTTTAATGGCATGGTGATGGCAGTACGTCACGATGCGGATCGCGTTTGTGGATTCCAGTTCCATCCGGAATCCATTCTCACCACCCAGGGCGCTCGCCTGCTGGAACAAACGCTGGCCTGGGCGCAGCAGAAACTAGAGCCAGCCAACACGCTGCAACCGATTCTGGAAAAACTGTATCAGGCGCAGACGCTTAGCCAACAAGAAAGCCACCAGCTGTTTTCAGCGGTGGTGCGTGGCGAGCTGAAGCCGGAACAACTGGCGGCGGCGCTGGTGAGCATGAAAATTCGCGGTGAGCACCCGAACGAGATCGCCGGGGCAGCAACCGCGCTACTGGAAAACGCAGCGCCGTTCCCGCGCCCGGATTATCTGTTTGCTGATATCGTCGGTACTGGCGGTGACGGCAGCAACAGTATCAATATTTCTACCGCCAGTGCGTTTGTCGCCGCGGCCTGTGGGCTGAAAGTGGCGAAACACGGCAACCGTAGCGTCTCCAGTAAATCTGGTTCGTCCGATCTGCTGGCGGCGTTCGGTATTAATCTTGATATGAACGCCGATAAATCGCGCCAGGCGCTGGATGAGTTAGGTGTATGTTTCCTCTTTGCGCCGAAGTATCACACCGGATTCCGCCACGCGATGCCGGTTCGCCAGCAACTGAAAACCCGCACCCTGTTCAATGTGCTGGGGCCATTGATTAACCCGGCGCATCCGCCGCTGGCGTTAATTGGTGTTTATAGTCCGGAACTGGTGCTGCCGATTGCCGAAACCTTGCGCGTGCTGGGGTATCAACGCGCGGCGGTGGTGCACAGCGGCGGGATGGATGAAGTTTCATTACACGCGCCGACAATCGTTGCCGAACTGCATGACGGCGAAATTAAAAGCTATCAGCTCACCGCAGAAGACTTTGGCCTGACACCCTACCACCAGGAGCAACTGGCAGGCGGAACACCGGAAGAAAACCGTGACATTTTAACACGTTTGTTACAAGGTAAAGGCGACGCCGCCCATGAAGCAGCCGTCGCTGCGAACGTCGCCATGTTAATGCGCCTGCATGGCCATGAAGATCTGCAAGCCAATGCGCAAACCGTTCTTGAGGTACTGCGCAGTGGTTCCGCTTACGACAGAGTCACCGCACTGGCGGCACGAGGGTAA", - "dna_sequence_length": 1596, - "functions": [ - "fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase" - ], - "id": "CDS_1244", - "location": [ - [ - "NC_000913", - 1321384, - "-", - 1596 - ] - ], - "md5": "8cea18c2a3e14921ff6a7e23c7229879", - "parent_gene": "", - "protein_md5": "e9f1d9cb551c4481107e5ee141184990", - "protein_translation": "MADILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERLATMSNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAGEILHGKASSIEHDGQAMFAGLTNPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHDADRVCGFQFHPESILTTQGARLLEQTLAWAQQKLEPANTLQPILEKLYQAQTLSQQESHQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADIVGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNADKSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDFGLTPYHQEQLAGGTPEENRDILTRLLQGKGDAAHEAAVAANVAMLMRLHGHEDLQANAQTVLEVLRSGSAYDRVTALAARG", - "protein_translation_length": 531, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1256" - ], - [ - "gene_synonym", - "EcoGene:EG11028" - ], - [ - "gene_synonym", - "b1264" - ], - [ - "gene_synonym", - "ECK1258" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00895" - ], - [ - "gene_synonym", - "NP_415780.1" - ], - [ - "gene_synonym", - "GeneID:945846" - ], - [ - "gene_synonym", - "trpE" - ], - [ - "gene_synonym", - "tryp-4" - ], - [ - "gene_synonym", - "anth" - ], - [ - "gene_synonym", - "GI:16129225" - ], - [ - "gene_synonym", - "tryD" - ], - [ - "gene_synonym", - "ASAP:ABE-0004244" - ] - ], - "dna_sequence": "ATGCAAACACAAAAACCGACTCTCGAACTGCTAACCTGCGAAGGCGCTTATCGCGACAATCCCACCGCGCTTTTTCACCAGTTGTGTGGGGATCGTCCGGCAACGCTGCTGCTGGAATCCGCAGATATCGACAGCAAAGATGATTTAAAAAGCCTGCTGCTGGTAGACAGTGCGCTGCGCATTACAGCTTTAGGTGACACTGTCACAATCCAGGCACTTTCCGGCAACGGCGAAGCCCTCCTGGCACTACTGGATAACGCCCTGCCTGCGGGTGTGGAAAGTGAACAATCACCAAACTGCCGTGTGCTGCGCTTCCCCCCTGTCAGTCCACTGCTGGATGAAGACGCCCGCTTATGCTCCCTTTCGGTTTTTGACGCTTTCCGTTTATTGCAGAATCTGTTGAATGTACCGAAGGAAGAACGAGAAGCCATGTTCTTCGGCGGCCTGTTCTCTTATGACCTTGTGGCGGGATTTGAAGATTTACCGCAACTGTCAGCGGAAAATAACTGCCCTGATTTCTGTTTTTATCTCGCTGAAACGCTGATGGTGATTGACCATCAGAAAAAAAGCACCCGTATTCAGGCCAGCCTGTTTGCTCCGAATGAAGAAGAAAAACAACGTCTCACTGCTCGCCTGAACGAACTACGTCAGCAACTGACCGAAGCCGCGCCGCCGCTGCCAGTGGTTTCCGTGCCGCATATGCGTTGTGAATGTAATCAGAGCGATGAAGAGTTCGGTGGCGTAGTGCGTTTGTTGCAAAAAGCGATTCGCGCTGGAGAAATTTTCCAGGTGGTGCCATCTCGCCGTTTCTCTCTGCCCTGCCCGTCACCGCTGGCGGCCTATTACGTGCTGAAAAAGAGTAATCCCAGCCCGTACATGTTTTTTATGCAGGATAATGATTTCACCCTATTTGGCGCGTCGCCGGAAAGCTCGCTCAAGTATGATGCCACCAGCCGCCAGATTGAGATCTACCCGATTGCCGGAACACGCCCACGCGGTCGTCGCGCCGATGGTTCACTGGACAGAGATCTCGACAGCCGTATTGAACTGGAAATGCGTACCGATCATAAAGAGCTGTCTGAACATCTGATGCTGGTTGATCTCGCCCGTAATGATCTGGCACGCATTTGCACCCCCGGCAGCCGCTACGTCGCCGATCTCACCAAAGTTGACCGTTATTCCTATGTGATGCACCTCGTCTCTCGCGTAGTCGGCGAACTGCGTCACGATCTTGACGCCCTGCACGCTTATCGCGCCTGTATGAATATGGGGACGTTAAGCGGTGCGCCGAAAGTACGCGCTATGCAGTTAATTGCCGAGGCGGAAGGTCGTCGCCGCGGCAGCTACGGCGGCGCGGTAGGTTATTTCACCGCGCATGGCGATCTCGACACCTGCATTGTGATCCGCTCGGCGCTGGTGGAAAACGGTATCGCCACCGTGCAAGCGGGTGCTGGTGTAGTCCTTGATTCTGTTCCGCAGTCGGAAGCCGACGAAACCCGTAACAAAGCCCGCGCTGTACTGCGCGCTATTGCCACCGCGCATCATGCACAGGAGACTTTCTGA", 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], - [ - "gene_synonym", - "trpL" - ], - [ - "gene_synonym", - "ASAP:ABE-0004246" - ], - [ - "gene_synonym", - "NP_415781.1" - ], - [ - "gene_synonym", - "ECK1259" - ], - [ - "gene_synonym", - "GeneID:945856" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD92" - ], - [ - "gene_synonym", - "GI:16129226" - ], - [ - "gene_synonym", - "b1265" - ], - [ - "gene_synonym", - "EcoGene:EG11274" - ] - ], - "dna_sequence": "ATGAAAGCAATTTTCGTACTGAAAGGTTGGTGGCGCACTTCCTGA", - "dna_sequence_length": 45, - "functions": [ - "trp operon leader peptide" - ], - "id": "CDS_1246", - "location": [ - [ - "NC_000913", - 1323082, - "-", - 45 - ] - ], - "md5": "a72e188ffc0d382d28af85b2f8e8f1c4", - "parent_gene": "", - "protein_md5": "a656f81e21bd955cd09a74e9d6759db3", - "protein_translation": "MKAIFVLKGWWRTS", - "protein_translation_length": 14, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yciV" - ], - [ - "gene_synonym", - "trpH" - ], - [ - "gene_synonym", - "GeneID:945857" - ], - [ - "gene_synonym", - "b1266" - ], - [ - "gene_synonym", - "JW1258" - ], - [ - "gene_synonym", - "ASAP:ABE-0004252" - ], - [ - "gene_synonym", - "GI:16129227" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77766" - ], - [ - "gene_synonym", - "ECK1260" - ], - [ - "gene_synonym", - "EcoGene:EG14257" - ], - [ - "gene_synonym", - "NP_415782.1" - ] - ], - "dna_sequence": "TTGAGCGACACGAATTATGCAGTGATTTACGACCTGCACAGCCATACCACAGCTTCCGATGGCTGCCTGACGCCAGAAGCATTGGTGCACCGTGCAGTCGAGATGCGCGTCGGCACCCTGGCGATCACCGACCATGACACCACAGCTGCAATCGCGCCAGCAAGAGAGGAAATTTCACGTTCGGGACTGGCGTTGAATCTTATTCCCGGCGTGGAAATTTCCACGGTCTGGGAAAATCATGAAATTCATATTGTCGGGCTGAATATTGATATTACTCATCCGCTAATGTGTGAGTTCCTCGCGCAGCAGACAGAACGGCGCAATCAGCGGGCGCAGCTGATTGCCGAAAGACTTGAAAAAGCGCAAATACCTGGGGCGCTGGAAGGCGCACAACGACTGGCGCAGGGCGGCGCAGTGACGCGCGGTCATTTTGCGCGTTTCCTTGTTGAGTGCGGCAAAGCCAGTTCAATGGCGGATGTCTTTAAAAAGTATCTGGCGCGCGGGAAAACCGGATACGTTCCGCCACAGTGGTGTACAATAGAACAAGCTATTGATGTCATTCATCATTCTGGCGGTAAGGCGGTGCTAGCTCATCCTGGGCGGTACAATCTTAGTGCTAAATGGCTGAAAAGATTGGTTGCGCATTTTGCCGAACACCACGGTGACGCGATGGAAGTCGCGCAGTGCCAGCAATCGCCCAATGAACGTACCCAGCTGGCGGCCCTTGCGCGTCAGCATCATTTATGGGCATCACAAGGATCTGATTTTCATCAGCCATGCCCGTGGATCGAACTGGGTCGTAAACTCTGGCTGCCCGCAGGCGTTGAAGGCGTCTGGCAGCTATGGGAACAGCCGCAGAACACCACAGAGAGGGAATTATGA", - "dna_sequence_length": 882, - "functions": [ - "PHP domain protein" - ], - "id": "CDS_1247", - "location": [ - [ - "NC_000913", - 1323220, - "+", - 882 - ] - ], - "md5": "278c87142194bc536283384aa40ef25c", - "parent_gene": "", - "protein_md5": "33a35732fb5524b8600ceca10ac0debd", - "protein_translation": "MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITDHDTTAAIAPAREEISRSGLALNLIPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQQTERRNQRAQLIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADVFKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAEHHGDAMEVAQCQQSPNERTQLAALARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVEGVWQLWEQPQNTTEREL", - "protein_translation_length": 293, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945854" - ], - [ - "gene_synonym", - "GI:162135901" - ], - [ - "gene_synonym", - "JW5196" - ], - [ - "gene_synonym", - "b1267" - ], - [ - "gene_synonym", - "EcoGene:EG12967" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFR4" - ], - [ - "gene_synonym", - "ASAP:ABE-0004254" - ], - [ - "gene_synonym", - "yciO" - ], - [ - "gene_synonym", - "ECK1261" - ], - [ - "gene_synonym", - "NP_415783.6" - ] - ], - "dna_sequence": "ATGAGCCAGTTTTTTTATATTCATCCTGATAACCCACAGCAACGTCTGATCAACCAGGCGGTGGAGATCGTGCGTAAAGGCGGGGTGATTGTTTATCCAACTGATTCCGGCTATGCGCTCGGCTGTAAAATTGAAGATAAAAACGCGATGGAGCGTATTTGTCGTATTCGCCAGCTGCCGGACGGTCACAACTTTACCCTGATGTGTCGCGATCTTTCTGAACTCTCGACCTATTCATTTGTTGATAACGTTGCGTTTCGTTTAATGAAAAACAACACGCCGGGCAACTATACCTTCATCCTGAAGGGGACGAAGGAAGTGCCACGCCGTCTGTTGCAGGAAAAACGCAAAACCATCGGTATGCGTGTGCCTTCTAACCCTATCGCTCAGGCGTTACTTGAAGCATTGGGCGAACCGATGCTTTCCACTTCGCTAATGCTGCCAGGCAGCGAATTTACCGAATCGGACCCGGAAGAAATTAAAGATCGTCTGGAAAAACAGGTAGATTTGATTATTCACGGCGGCTATCTCGGGCAGAAACCGACAACGGTTATTGATCTTACCGATGATACGCCGGTCGTGGTGCGTGAAGGCGTAGGTGATGTGAAGCCTTTCTTATAA", - "dna_sequence_length": 621, - "functions": [ - "putative RNA binding protein" - ], - "id": "CDS_1248", - "location": [ - [ - "NC_000913", - 1324098, - "+", - 621 - ] - ], - "md5": "1728f291fb0e3e602ed55a909bd9cfc0", - "parent_gene": "", - "protein_md5": "8c594a998eee7b31f51598408074e2db", - "protein_translation": "MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL", - "protein_translation_length": 206, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415784.1" - ], - [ - "gene_synonym", - "EcoGene:EG12969" - ], - [ - "gene_synonym", - "b1268" - ], - [ - "gene_synonym", - "yciQ" - ], - [ - "gene_synonym", - "yciP" - ], - [ - "gene_synonym", - "JW5197" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45848" - ], - [ - "gene_synonym", - "ASAP:ABE-0004256" - ], - [ - "gene_synonym", - "ECK1262" - ], - [ - "gene_synonym", - "GeneID:945850" - ], - [ - "gene_synonym", - "GI:16129229" - ] - ], - "dna_sequence": "ATGGCAGGGAAGTTTCGCTGCATTTTGCTGTTGATAGCAGGGCTGTTTGTATCATCTCTAAGTTATGCAGAAAACACGGAGATCCCTTCTTATGAAGAAGGGATCTCGCTCTTTGATGTTGAAGCCACTCTGCAACCAGATGGGGTGCTCGACATCAAAGAAAATATTCATTTTCAGGCGCGAAATCAGCAGATTAAGCACGGCTTTTATCGTGATTTACCACGACTATGGATGCAGCCTGATGGGGACGCTGCACTGCTGAACTATCATATTGTTGGCGTCACCCGTGATGGTATTCCTGAACCCTGGCATCTTGACTGGCATATCGGGTTAATGAGTATTGTCGTGGGCGATAAACAACGTTTCTTGCCTCAAGGCGACTATCATTATCAAATTCATTATCAGGTTAAAAATGCTTTCCTGCGTGAGGGGGATTCTGATCTGCTAATCTGGAACGTGACCGGTAACCACTGGCCGTTTGAAATTTATAAGACCCGTTTTTCTCTCCAGTTCTCTAATATTGCGGGTAATCCATTTAGCGAAATCGATCTTTTTACCGGAGAAGAGGGCGACACATATCGTAATGGCCGCATCCTTGAGGACGGAAGAATTGAATCCCGCGATCCGTTTTATCGTGAAGATTTCACGGTCCTCTACCGCTGGCCTCACGCTTTACTTAGCAATGCCTCGGCTCCGCAAACGACGAATATTTTCAGCCATCTTCTTTTACCCTCCACGTCATCGTTGTTAATTTGGTTTCCGTGTCTGTTCCTGGTTTGTGGATGGTTATATCTCTGGAAGCGCAGGCCGCAATTTACGCCGGTAGATGTGATTGAAACCGATGTCATTCCGCCAGATTACACGCCCGGCATGTTACGTCTCGATGCGAAGCTAGTTTACGACGATAAAGGTTTTTGTGCCGATATCGTAAATCTGATTGTGAAAGGAAAAATTCATCTGGAAGATCAGTCTGACAAGAACCAGCAAATCCTGATTCGTGTTAATGAAGGCGCGACCAGAAATAATGCGGTATTACTGCCCGCAGAGCAGTTATTACTGGAAGCGTTATTTCGTAAAGGCGATAAGGTCGTTCTTACGGGGAGACGCAACAGAGTCTTACGCAGGGCATTTTTACGGATGCAGAAATTTTATCTGCCGCGTAAAAAGTCTTCGTTTTACCGGTCTGATACTTTTTTGCAATGGGGTGGACTGGCAATATTGGCGGTCATTCTTTACGGTAACTTGAGTCCTGTAGGCTGGGCAGGAATGAGTCTGGTGGGCGATATGTTTATTATGATCTGCTGGATTATTCCTTTTTTATTTTGTTCCCTTGAGCTTTTGTTTGCCCGCGATGATGACAAGCCTTGCGTTAATCGTGTAATCATCACTTTGTTTTTACCACTGATTTGTTCAGGCGTGGCCTTCTATTCTCTCTACATCAATGTCGGAGATGTATTCTTTTACTGGTATATGCCAGCGGGTTATTTTACCGCTGTTTGCCTGACCGGTTATCTCACTGGCATGGGGTATATTTTTCTGCCAAAGTTTACCCAAACTGGACAGCAACGTTATGCCCACGGTGAAGCTATCGTTAACTATCTTGCGCGTAAAGAGGCAGCAACACACAGTGGACGTCGGCGGAAAGGGGAAACACGGAAACTGGATTACGCGTTGCTAGGTTGGGCTATATCGGCAAATTTGGGGAGGGAATGGGCGTTACGCATTGCCCCTTCGCTTTCTTCGGCGATTCGCGCTCCAGAGATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAA", 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"MAGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTRFSLQFSNIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLSNASAPQTTNIFSHLLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLEDQSDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRSDTFLQWGGLAILAVILYGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFTAVCLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAISANLGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAGGGGGGGW", - "protein_translation_length": 631, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1261" - ], - [ - "gene_synonym", - "b1269" - ], - [ - "gene_synonym", - "GeneID:945840" - ], - [ - "gene_synonym", - "EcoGene:EG12433" - ], - [ - "gene_synonym", - "NP_415785.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004259" - ], - [ - "gene_synonym", - "rluB" - ], - [ - "gene_synonym", - "ECK1263" - ], - [ - "gene_synonym", - "yciL" - ], - [ - "gene_synonym", - "GI:16129230" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37765" - ] - ], - "dna_sequence": "ATGAGCGAAAAGCTACAGAAAGTGCTGGCGCGTGCCGGCCACGGTTCTCGCCGTGAAATCGAATCTATTATTGAAGCCGGTCGTGTGAGTGTTGATGGCAAAATTGCTAAACTCGGCGATCGTGTTGAAGTTACCCCTGGATTGAAAATCCGTATCGATGGTCACCTGATTTCGGTACGTGAGTCCGCTGAACAAATTTGTCGCGTTCTGGCCTATTACAAACCGGAAGGTGAGTTGTGTACCCGTAACGATCCGGAAGGACGTCCAACGGTGTTTGACCGTCTGCCAAAACTGCGTGGCGCACGCTGGATTGCCGTGGGTCGCTTGGACGTTAATACCTGTGGTCTGCTGCTGTTCACCACCGATGGTGAACTGGCAAACCGTTTAATGCACCCAAGCCGTGAAGTTGAACGTGAATATGCCGTGCGTGTATTTGGTCAGGTTGACGACGCGAAACTGCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGATGGTCCGGCAGCTTTTAAAACCATCAAGTTCAGCGGCGGCGAAGGGATCAACCAGTGGTACAACGTGACTCTGACCGAAGGCCGTAACCGTGAAGTTCGTCGTCTGTGGGAAGCGGTTGGTGTGCAGGTGAGCCGCCTGATCCGTGTTCGTTACGGTGATATCCCACTGCCAAAAGGTCTGCCACGCGGTGGCTGGACGGAGCTGGACCTCGCCCAGACTAACTATCTGCGCGAACTGGTGGAGCTACCGCCAGAAACCAGCTCTAAAGTCGCTGTAGAAAAAGACCGTCGTCGCATGAAGGCGAATCAGATTCGTCGTGCGGTGAAACGTCACAGTCAGGTGAGCGGCGGTCGTCGTTCTGGCGGACGTAATAATAACGGTTAA", - "dna_sequence_length": 876, - "functions": [ - "23S rRNA pseudouridine(2605) synthase" - ], - "id": "CDS_1250", - "location": [ - [ - "NC_000913", - 1326852, - "+", - 876 - ] - ], - "md5": "2d471b7b63d6ef3148c741b535953d17", - "parent_gene": "", - "protein_md5": "2d06d19be4e854443c9185e797f09654", - "protein_translation": "MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHSQVSGGRRSGGRNNNG", - "protein_translation_length": 291, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1262" - ], - [ - "gene_synonym", - "b1270" - ], - [ - "gene_synonym", - "EcoGene:EG10130" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9H5" - ], - [ - "gene_synonym", - "ASAP:ABE-0004261" - ], - [ - "gene_synonym", - "GeneID:945839" - ], - [ - "gene_synonym", - "NP_415786.1" - ], - [ - "gene_synonym", - "cobA" - ], - [ - "gene_synonym", - "btuR" - ], - [ - "gene_synonym", - "GI:16129231" - ], - [ - "gene_synonym", - "ECK1264" - ] - ], - "dna_sequence": "ATGAGTGATGAACGCTACCAACAGCGTCAGCAGCGAGTGAAAGAAAAAGTAGATGCTCGTGTGGCCCAGGCCCAGGATGAACGCGGTATTATCATCGTCTTTACCGGCAATGGAAAAGGCAAAACCACCGCGGCATTTGGTACGGCAACACGCGCAGTTGGTCACGGAAAAAAAGTAGGCGTCGTGCAGTTTATTAAAGGCACCTGGCCTAATGGCGAACGCAATCTGCTGGAGCCACATGGCGTTGAGTTTCAGGTGATGGCAACGGGCTTTACCTGGGATACACAAAACCGCGAGTCTGATACCGCCGCCTGCCGCGAAGTCTGGCAACATGCAAAGCGGATGCTTGCTGATTCCTCACTGGATATGGTTTTGCTTGATGAACTGACGTATATGGTGGCGTATGACTATTTGCCACTGGAAGAAGTGGTGCAGGCGTTAAATGAACGTCCACATCAACAGACGGTGATTATCACGGGTCGTGGTTGTCATCGGGATATTCTTGAACTGGCAGATACGGTAAGTGAATTACGCCCCGTCAAACATGCGTTTGATGCCGGTGTAAAAGCGCAGATAGGGATCGATTATTAA", - "dna_sequence_length": 591, - "functions": [ - "cob(I)yrinic acid a,c-diamide adenosyltransferase" - ], - "id": "CDS_1251", - "location": [ - [ - "NC_000913", - 1328357, - "-", - 591 - ] - ], - "md5": "d171247c464a72b264ea19aa61663c0c", - "parent_gene": "", - "protein_md5": "12eb535e586bf0ca4aa5e39931655a45", - "protein_translation": "MSDERYQQRQQRVKEKVDARVAQAQDERGIIIVFTGNGKGKTTAAFGTATRAVGHGKKVGVVQFIKGTWPNGERNLLEPHGVEFQVMATGFTWDTQNRESDTAACREVWQHAKRMLADSSLDMVLLDELTYMVAYDYLPLEEVVQALNERPHQQTVIITGRGCHRDILELADTVSELRPVKHAFDAGVKAQIGIDY", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1271" - ], - [ - "gene_synonym", - "JW1263" - ], - [ - "gene_synonym", - "GeneID:945838" - ], - [ - "gene_synonym", - "ASAP:ABE-0004263" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31808" - ], - [ - "gene_synonym", - "EcoGene:EG11759" - ], - [ - "gene_synonym", - "NP_415787.1" - ], - [ - "gene_synonym", - "yciK" - ], - [ - "gene_synonym", - "ECK1265" - ], - [ - "gene_synonym", - "GI:16129232" - ] - ], - "dna_sequence": "ATGCATTACCAGCCAAAACAAGATTTACTCAATGATCGCATTATCCTGGTGACGGGAGCCAGCGATGGTATTGGTCGTGAAGCCGCGATGACGTATGCACGCTATGGTGCGACAGTGATTCTGTTGGGCCGTAATGAAGAAAAATTACGTCAGGTAGCCAGCCACATAAACGAAGAAACTGGGCGTCAGCCACAGTGGTTTATTCTCGATTTGCTGACCTGCACGTCCGAAAATTGCCAACAACTGGCACAGCGCATTGCCGTTAATTATCCGCGTCTGGATGGTGTTTTGCATAATGCCGGATTGCTCGGCGATGTTTGCCCAATGAGCGAACAAAATCCGCAGGTCTGGCAGGACGTCATGCAGGTCAACGTTAATGCCACCTTTATGCTCACCCAGGCACTGCTTCCTTTATTACTCAAATCGGACGCCGGTTCACTGGTCTTTACTTCATCAAGCGTTGGACGTCAGGGACGAGCCAACTGGGGTGCATATGCAGCGTCGAAATTTGCCACCGAAGGGATGATGCAGGTACTGGCCGATGAATATCAGCAGCGCCTGCGTGTCAACTGCATTAACCCAGGCGGTACGCGCACCGCAATGCGTGCCAGCGCCTTCCCGACCGAAGATCCACAGAAACTTAAAACACCCGCTGATATCATGCCGCTCTACCTCTGGCTGATGGGCGATGACAGCCGCCGTAAAACCGGCATGACCTTTGACGCCCAACCGGGCCGTAAACCAGGAATTTCCCAATGA", - "dna_sequence_length": 759, - "functions": [ - "putative EmrKY-TolC system oxoacyl-(acyl carrier protein) reductase" - ], - "id": "CDS_1252", - "location": [ - [ - "NC_000913", - 1329112, - "-", - 759 - ] - ], - "md5": "eb13860392e1582809f8eaf51d68ca58", - "parent_gene": "", - "protein_md5": "300e549f11fdd41c0c9fcd5e849be56e", - "protein_translation": "MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGISQ", - "protein_translation_length": 252, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1272" - ], - [ - "gene_synonym", - "JW1264" - ], - [ - "gene_synonym", - "GeneID:945858" - ], - [ - "gene_synonym", - "ASAP:ABE-0004267" - ], - [ - "gene_synonym", - "NP_415788.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG14" - ], - [ - "gene_synonym", - "sohB" - ], - [ - "gene_synonym", - "EcoGene:EG10956" - ], - [ - "gene_synonym", - "ECK1266" - ], - [ - "gene_synonym", - "GI:16129233" - ] - ], - "dna_sequence": "GTGGAATTGTTGTCTGAATATGGTTTGTTTTTGGCGAAAATCGTTACCGTTGTGCTAGCGATTGCGGCGATTGCCGCCATTATTGTCAATGTTGCTCAACGTAATAAACGCCAGCGTGGCGAGTTACGGGTCAACAATCTCAGCGAACAGTATAAGGAGATGAAAGAAGAACTGGCCGCGGCGCTGATGGACTCACATCAGCAAAAACAGTGGCACAAAGCGCAGAAGAAAAAGCATAAGCAAGAAGCGAAAGCAGCAAAAGCGAAAGCCAAACTGGGCGAGGTGGCAACTGACAGTAAACCCCGCGTCTGGGTGCTGGATTTTAAAGGCAGCATGGACGCCCATGAAGTGAACTCGCTACGTGAAGAGATAACGGCTGTACTCGCAGCATTCAAACCGCAGGATCAGGTTGTGCTCCGTCTGGAAAGCCCTGGTGGCATGGTGCATGGTTACGGGCTGGCGGCTTCGCAACTGCAGCGTCTGCGCGATAAAAACATTCCTTTAACTGTTACGGTAGACAAAGTCGCTGCCAGCGGCGGTTACATGATGGCCTGTGTGGCGGACAAAATTGTTTCCGCACCGTTTGCTATTGTGGGTTCCATTGGCGTGGTGGCGCAAATGCCCAACTTTAACCGCTTCCTGAAAAGCAAAGATATTGATATCGAACTGCACACTGCCGGGCAGTATAAGCGCACGCTGACGTTGCTGGGTGAAAATACCGAAGAAGGGCGGGAGAAATTCCGCGAAGAGTTGAACGAAACGCATCAGTTGTTTAAAGATTTTGTGAAGCGTATGCGTCCTTCTCTGGATATTGAACAGGTGGCAACGGGTGAACACTGGTACGGACAACAGGCGGTAGAGAAAGGCCTGGTTGATGAAATCAACACCAGTGATGAAGTTATTCTTAGCCTGATGGAAGGCCGTGAAGTGGTCAATGTACGCTATATGCAGCGTAAACGACTCATTGACCGATTCACCGGCAGCGCGGCAGAGAGCGCCGATCGATTGTTGCTACGCTGGTGGCAGCGGGGTCAAAAGCCATTGATGTAA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P0AB61" - ], - [ - "gene_synonym", - "NP_415789.1" - ], - [ - "gene_synonym", - "GI:16129234" - ], - [ - "gene_synonym", - "yciN" - ], - [ - "gene_synonym", - "ECK1267" - ] - ], - "dna_sequence": "ATGAACAAAGAGACACAACCCATCGACCGCGAAACGCTGTTGAAAGAGGCCAACAAAATCATTCGTGAGCATGAGGATACGCTCGCAGGGATTGAAGCCACCGGCGTCACGCAGCGTAATGGCGTGCTGGTATTTACCGGCGACTACTTTTTAGATGAACAAGGATTGCCAACAGCCAAAAGCACCGCGGTGTTTAATATGTTCAAACACCTGGCCCATGTGCTTTCAGAAAAATATCATCTGGTTGATTAA", - "dna_sequence_length": 252, - "functions": [ - "DUF2498 protein YciN" - ], - "id": "CDS_1254", - "location": [ - [ - "NC_000913", - 1330668, - "-", - 252 - ] - ], - "md5": "fbe24d6ccc3bbc59fd105f871ad11373", - "parent_gene": "", - "protein_md5": "00ed2acece391bc2d4fba1e81e860271", - "protein_translation": "MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLVFTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD", - "protein_translation_length": 83, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "supX" - ], - [ - "gene_synonym", - "EcoGene:EG11013" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06612" - ], - [ - "gene_synonym", - "JW1266" - ], - [ - "gene_synonym", - "b1274" - ], - [ - "gene_synonym", - "ASAP:ABE-0004275" - ], - [ - "gene_synonym", - "GeneID:945862" - ], - [ - "gene_synonym", - "asuA?" - ], - [ - "gene_synonym", - "ECK1268" - ], - [ - "gene_synonym", - "GI:16129235" - ], - [ - "gene_synonym", - "NP_415790.1" - ], - [ - "gene_synonym", - "topA" - ] - ], - "dna_sequence": "ATGGGTAAAGCTCTTGTCATCGTTGAGTCCCCGGCAAAAGCCAAAACGATCAACAAGTATCTGGGTAGTGACTACGTGGTGAAATCCAGCGTCGGTCACATCCGCGATTTGCCGACCAGTGGCTCAGCTGCCAAAAAGAGTGCCGACTCTACCTCCACCAAGACGGCTAAAAAGCCTAAAAAGGATGAACGTGGCGCTCTCGTCAACCGTATGGGGGTTGACCCGTGGCACAATTGGGAGGCGCACTATGAAGTGTTGCCTGGTAAAGAGAAGGTCGTCTCTGAACTGAAACAACTGGCTGAAAAAGCCGACCACATCTATCTCGCAACCGACCTTGACCGCGAAGGGGAAGCCATTGCATGGCACCTGCGGGAAGTGATTGGGGGTGATGATGCGCGCTATAGCCGAGTGGTGTTTAACGAAATTACTAAAAACGCGATCCGCCAGGCATTTAACAAACCGGGTGAGCTGAATATTGATCGTGTTAATGCCCAGCAGGCGCGTCGCTTTATGGACCGCGTGGTGGGGTATATGGTTTCGCCGCTGCTATGGAAAAAGATCGCTCGTGGCCTGTCTGCCGGTCGTGTGCAGTCGGTGGCGGTTCGCCTGGTGGTCGAGCGTGAGCGTGAAATTAAAGCGTTCGTGCCGGAAGAGTTCTGGGAAGTCGATGCCAGCACGACCACGCCATCTGGTGAAGCGTTGGCGTTACAGGTGACTCATCAGAACGACAAACCGTTCCGTCCGGTCAACAAAGAACAAACTCAGGCTGCGGTAAGTCTGCTGGAAAAAGCGCGCTACAGCGTGCTGGAACGTGAAGACAAACCGACAACCAGTAAACCTGGCGCTCCTTTTATTACCTCTACGCTGCAACAAGCTGCCAGCACCCGTCTTGGATTTGGCGTGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGACGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGAAAACTCACAGGAAGCGCACGAAGCGATTCGTCCTTCTGACGTCAATGTGATGGCGGAATCGCTGAAGGATATGGAAGCAGATGCGCAGAAACTGTACCAGTTAATCTGGCGTCAGTTCGTTGCCTGCCAGATGACCCCAGCGAAATATGACTCCACGACGCTGACCGTTGGTGCGGGCGATTTCCGCCTGAAAGCACGCGGTCGTATTTTGCGTTTTGATGGCTGGACAAAAGTGATGCCTGCGTTGCGTAAAGGCGATGAAGATCGCATCTTACCAGCAGTTAATAAAGGCGATGCTCTGACGCTCGTTGAACTTACACCAGCCCAGCACTTTACCAAGCCGCCAGCCCGTTTCAGTGAAGCATCGCTGGTTAAAGAGCTGGAAAAACGCGGTATCGGTCGTCCGTCTACCTATGCGTCGATCATTTCGACCATTCAGGATCGTGGCTACGTGCGAGTAGAAAATCGTCGTTTCTATGCGGAAAAAATGGGCGAAATCGTCACCGATCGCCTTGAAGAAAATTTCCGCGAGTTAATGAACTACGACTTTACCGCGCAGATGGAAAACAGCCTCGACCAGGTGGCAAATCACGAAGCAGAGTGGAAAGCTGTACTGGATCACTTCTTCTCGGATTTCACCCAGCAGTTAGATAAAGCTGAAAAAGATCCGGAAGAGGGTGGTATGCGCCCGAACCAGATGGTTCTGACCAGCATTGACTGCCCGACTTGTGGTCGCAAAATGGGGATTCGCACAGCGAGCACCGGGGTATTCCTTGGCTGTTCTGGCTATGCGCTGCCGCCGAAAGAGCGTTGCAAAACCACCATTAACCTGGTGCCGGAAAACGAAGTGCTGAACGTGCTGGAAGGCGAAGATGCTGAAACCAACGCGCTGCGCGCAAAACGTCGTTGCCCGAAATGCGGCACGGCGATGGACAGCTATCTCATCGATCCGAAACGTAAGTTGCATGTCTGTGGTAATAACCCAACCTGCGACGGTTACGAGATCGAAGAGGGCGAATTCCGCATTAAAGGTTATGACGGCCCGATCGTTGAGTGTGAAAAATGTGGCTCTGAAATGCACCTGAAAATGGGGCGTTTCGGTAAATACATGGCCTGCACCAACGAAGAGTGTAAAAACACACGTAAGATTTTACGTAACGGCGAAGTGGCACCACCGAAAGAAGATCCGGTGCCATTACCTGAGCTGCCGTGCGAAAAATCAGATGCTTATTTCGTGCTGCGTGACGGTGCTGCCGGTGTGTTCCTGGCTGCCAACACTTTCCCGAAATCGCGTGAAACGCGTGCGCCACTGGTGGAAGAGCTTTATCGCTTCCGCGACCGTCTGCCGGAAAAACTGCGTTATCTGGCCGATGCGCCACAGCAGGATCCGGAAGGTAATAAGACCATGGTTCGCTTTAGCCGTAAAACCAAACAGCAATATGTCTCTTCGGAAAAAGACGGAAAGGCGACTGGCTGGTCAGCATTTTATGTTGATGGCAAATGGGTTGAAGGAAAAAAATAA", 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"MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSAAKKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNIDRVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDASTTTPSGEALALQVTHQNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPTTSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESPNQYASKENSQEAHEAIRPSDVNVMAESLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPALRKGDEDRILPAVNKGDALTLVELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMENSLDQVANHEAEWKAVLDHFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGEDAETNALRAKRRCPKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNEECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYVSSEKDGKATGWSAFYVDGKWVEGKK", - "protein_translation_length": 865, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004279" - ], - [ - "gene_synonym", - "b1275" - ], - [ - "gene_synonym", - "JW1267" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9F3" - ], - [ - "gene_synonym", - "GeneID:945771" - ], - [ - "gene_synonym", - "cysB" - ], - [ - "gene_synonym", - "ECK1269" - ], - [ - "gene_synonym", - "GI:16129236" - ], - [ - "gene_synonym", - "EcoGene:EG10184" - ], - [ - "gene_synonym", - "NP_415791.1" - ] - ], - "dna_sequence": "ATGAAATTACAACAACTTCGCTATATTGTTGAGGTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCTGTCGAAAGTCGATGCCATAAAATCGGTTGCCGGAGAGCACACCTGGCCGGATAAAGGTTCACTGTATATCGCCACCACGCATACCCAGGCACGCTACGCATTACCAAACGTCATCAAAGGCTTTATTGAGCGTTATCCTCGCGTTTCTTTGCATATGCACCAGGGCTCGCCGACACAAATTGCTGATGCCGTCTCTAAAGGCAATGCTGATTTCGCTATCGCCACAGAAGCGCTGCATCTGTATGAAGATTTAGTGATGTTACCGTGCTACCACTGGAATCGGGCTATTGTAGTCACTCCGGATCACCCGCTGGCAGGCAAAAAAGCCATTACCATTGAAGAACTGGCGCAATATCCGTTGGTGACATATACCTTCGGCTTTACCGGACGTTCAGAACTGGATACTGCCTTTAATCGCGCAGGGTTAACGCCGCGTATCGTTTTCACGGCAACGGATGCTGACGTCATTAAAACTTACGTCCGGTTAGGGCTGGGGGTAGGGGTCATTGCCAGCATGGCGGTGGATCCGGTCGCCGATCCCGACCTTGTGCGTGTTGATGCTCACGATATCTTCAGCCACAGTACAACCAAAATTGGTTTTCGCCGTAGTACTTTCTTGCGCAGTTATATGTATGATTTCATTCAGCGTTTTGCACCGCATTTAACGCGTGATGTCGTTGATGCGGCTGTCGCATTGCGCTCTAATGAAGAAATTGAGGTCATGTTTAAAGATATAAAACTGCCGGAAAAATAA", - "dna_sequence_length": 975, - "functions": [ - "N-acetylserine-responsive cysteine regulon transcriptional activator", - "autorepressor" - ], - "id": "CDS_1256", - "location": [ - [ - "NC_000913", - 1333855, - "+", - 975 - ] - ], - "md5": "ebcbac8bd41c1d6ea97c8af550b38841", - "parent_gene": "", - "protein_md5": "14303662561815729cd506cb95d39cd6", - "protein_translation": "MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHTQARYALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVMLPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVVDAAVALRSNEEIEVMFKDIKLPEK", - "protein_translation_length": 324, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:635341465" - ], - [ - "gene_synonym", - "b4522" - ], - [ - "gene_synonym", - "YP_588449.2" - ], - [ - "gene_synonym", - "GeneID:1450256" - ], - [ - "gene_synonym", - "ymiA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CB62" - ], - [ - "gene_synonym", - "ECK4433" - ], - [ - "gene_synonym", - "EcoGene:EG14463" - ] - ], - "dna_sequence": "TTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAATCAGGAACCCCGCCGCGATCCTGAATTAAAACGTAAAGCCTGGCTGGCGGTTTTTCTTGGTTCTGCACTTTTCTGGGTGGTTGTCGCACTGCTGATTTGGAAAGTGTGGGGATAA", - "dna_sequence_length": 165, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1257", - "location": [ - [ - "NC_000913", - 1335124, - "+", - 165 - ] - ], - "md5": "b4887ccb6216d18580aeaecf047c54e8", - "parent_gene": "", - "protein_md5": "92e08a9a43bc6ab0853567f6d2973c56", - "protein_translation": "MLISDGDYMRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG", - "protein_translation_length": 54, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_588450.2" - ], - [ - "gene_synonym", - "JW5198" - ], - [ - "gene_synonym", - "b4523" - ], - [ - "gene_synonym", - "ASAP:ABE-0285044" - ], - [ - "gene_synonym", - "JW5199" - ], - [ - "gene_synonym", - "ASAP:ABE-0285043" - ], - [ - "gene_synonym", - "yciX" - ], - [ - "gene_synonym", - "EcoGene:EG14351" - ], - [ - "gene_synonym", - "GeneID:1450257" - ], - [ - "gene_synonym", - "ECK1270" - ], - [ - "gene_synonym", - "GI:145698251" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P58094" - ], - [ - "gene_synonym", - "ASAP:ABE-0285107" - ] - ], - "dna_sequence": "ATGGTCGGTCAGGAGCAACTGGAGTCGTCACCATTATGCCAGCATAGTGACAATGAAACAGAAACGAAACGGGAATGTTCCGTCGTTATTCCAGACGACTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAA", - "dna_sequence_length": 168, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1258", - "location": [ - [ - "NC_000913", - 1335291, - "+", - 168 - ] - ], - "md5": "cdd73ceeb2aa0abdb5a800c4e7c05ef6", - "parent_gene": "", - "protein_md5": "f786bb04bcbdb43a697f722afc2a5233", - "protein_translation": "MVGQEQLESSPLCQHSDNETETKRECSVVIPDDWQLTSQQQAFIELFAEDDQPKQ", - "protein_translation_length": 55, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004283" - ], - [ - "gene_synonym", - "b1276" - ], - [ - "gene_synonym", - "JW1268" - ], - [ - "gene_synonym", - "NP_415792.1" - ], - [ - "gene_synonym", - "acn" - ], - [ - "gene_synonym", - "acnA" - ], - [ - "gene_synonym", - "EcoGene:EG11325" - ], - [ - "gene_synonym", - "ECK1271" - ], - [ - "gene_synonym", - "GI:16129237" - ], - [ - "gene_synonym", - "GeneID:946724" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25516" - ] - ], - "dna_sequence": "ATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCTTGCTGCTAAATCACTGGGCGATATCACCCGTCTACCCAAGTCACTCAAAGTTTTGCTCGAAAACCTGCTGCGCTGGCAGGATGGTAACTCGGTTACCGAAGAGGATATCCACGCGCTGGCAGGATGGCTGAAAAATGCCCATGCTGACCGTGAAATTGCCTACCGCCCGGCAAGGGTGCTGATGCAGGACTTTACCGGCGTACCTGCCGTTGTTGATCTGGCGGCAATGCGCGAAGCGGTTAAACGCCTCGGCGGCGATACTGCAAAGGTTAACCCGCTCTCACCGGTCGACCTGGTCATTGACCACTCGGTGACCGTCGATCGTTTTGGTGATGATGAGGCATTTGAAGAAAACGTACGCCTGGAAATGGAGCGCAACCACGAACGTTATGTGTTCCTGAAATGGGGAAAGCAAGCGTTCAGTCGGTTTAGCGTCGTGCCGCCAGGCACAGGCATTTGCCATCAGGTTAACCTCGAATATCTCGGCAAAGCAGTGTGGAGTGAATTGCAGGACGGTGAATGGATTGCTTATCCGGATACACTCGTTGGTACTGACTCGCACACCACCATGATCAACGGCCTTGGCGTGCTGGGGTGGGGCGTTGGTGGGATCGAAGCAGAAGCCGCAATGTTAGGCCAGCCGGTTTCCATGCTTATCCCGGATGTAGTGGGCTTCAAACTTACCGGAAAATTACGTGAAGGTATTACCGCCACAGACCTGGTTCTCACTGTTACCCAAATGCTGCGCAAACATGGCGTGGTGGGGAAATTCGTCGAATTTTATGGTGATGGTCTGGATTCACTACCGTTGGCGGATCGCGCCACCATTGCCAATATGTCGCCAGAATATGGTGCCACCTGTGGCTTCTTCCCAATCGATGCTGTAACCCTCGATTACATGCGTTTAAGCGGGCGCAGCGAAGATCAGGTCGAGTTGGTCGAAAAATATGCCAAAGCGCAGGGCATGTGGCGTAACCCGGGCGATGAACCAATTTTTACCAGTACGTTAGAACTGGATATGAATGACGTTGAAGCGAGCCTGGCAGGGCCTAAACGCCCACAGGATCGCGTTGCACTGCCCGATGTACCAAAAGCATTTGCCGCCAGTAACGAACTGGAAGTGAATGCCACGCATAAAGATCGCCAGCCGGTCGATTATGTTATGAACGGACATCAGTATCAGTTACCTGATGGCGCTGTGGTCATTGCTGCGATAACCTCGTGCACCAACACCTCTAACCCAAGTGTGCTGATGGCCGCAGGCTTGCTGGCGAAAAAAGCCGTAACTCTGGGCCTCAAGCGGCAACCATGGGTCAAAGCGTCGCTGGCACCGGGTTCGAAAGTCGTTTCTGATTATCTGGCAAAAGCGAAACTGACACCGTATCTCGACGAACTGGGGTTTAACCTTGTGGGATACGGTTGTACCACCTGTATTGGTAACTCTGGGCCGCTGCCCGATCCTATCGAAACGGCAATCAAAAAAAGCGATTTAACCGTCGGTGCGGTGCTGTCCGGCAACCGTAACTTTGAAGGCCGTATCCATCCGCTGGTTAAAACTAACTGGCTGGCCTCGCCGCCGCTGGTGGTTGCCTATGCGCTGGCGGGAAATATGAATATCAACCTGGCTTCTGAGCCTATCGGCCATGATCGCAAAGGCGATCCGGTTTATCTGAAAGATATCTGGCCATCGGCACAAGAAATTGCCCGTGCGGTAGAACAAGTCTCCACAGAAATGTTCCGCAAAGAGTACGCAGAAGTTTTTGAAGGCACAGCAGAGTGGAAGGGAATTAACGTCACACGATCCGATACCTACGGTTGGCAGGAGGACTCAACCTATATTCGCTTATCGCCTTTCTTTGATGAAATGCAGGCAACACCAGCACCAGTGGAAGATATTCACGGTGCGCGGATCCTCGCAATGCTGGGGGATTCAGTCACCACTGACCATATCTCTCCGGCGGGCAGTATTAAGCCCGACAGCCCAGCGGGTCGATATCTACAAGGTCGGGGTGTTGAGCGAAAAGACTTTAACTCCTACGGTTCGCGGCGTGGTAACCATGAAGTGATGATGCGCGGCACCTTCGCCAATATTCGCATCCGTAATGAAATGGTGCCTGGCGTTGAAGGGGGGATGACGCGGCATTTACCTGACAGCGACGTAGTCTCTATTTATGATGCTGCGATGCGCTATAAGCAGGAGCAAACGCCGCTGGCGGTGATTGCCGGGAAAGAGTATGGATCAGGCTCCAGTCGTGACTGGGCGGCAAAAGGTCCGCGTCTGCTTGGTATTCGTGTGGTGATTGCCGAATCGTTTGAACGAATTCACCGTTCGAATTTAATTGGCATGGGCATCCTGCCGCTGGAATTTCCGCAAGGCGTAACGCGTAAAACGTTAGGGCTAACCGGGGAAGAGAAGATTGATATTGGCGATCTGCAAAACCTACAACCCGGCGCGACGGTTCCGGTGACGCTTACGCGCGCGGATGGTAGCCAGGAAGTCGTACCCTGCCGTTGTCGTATCGACACCGCGACGGAGTTGACCTACTACCAGAACGACGGCATTTTGCATTATGTCATTCGTAATATGTTGAAGTAA", 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"MSSTLREASKDTLQAKDKTYHYYSLPLAAKSLGDITRLPKSLKVLLENLLRWQDGNSVTEEDIHALAGWLKNAHADREIAYRPARVLMQDFTGVPAVVDLAAMREAVKRLGGDTAKVNPLSPVDLVIDHSVTVDRFGDDEAFEENVRLEMERNHERYVFLKWGKQAFSRFSVVPPGTGICHQVNLEYLGKAVWSELQDGEWIAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPDVVGFKLTGKLREGITATDLVLTVTQMLRKHGVVGKFVEFYGDGLDSLPLADRATIANMSPEYGATCGFFPIDAVTLDYMRLSGRSEDQVELVEKYAKAQGMWRNPGDEPIFTSTLELDMNDVEASLAGPKRPQDRVALPDVPKAFAASNELEVNATHKDRQPVDYVMNGHQYQLPDGAVVIAAITSCTNTSNPSVLMAAGLLAKKAVTLGLKRQPWVKASLAPGSKVVSDYLAKAKLTPYLDELGFNLVGYGCTTCIGNSGPLPDPIETAIKKSDLTVGAVLSGNRNFEGRIHPLVKTNWLASPPLVVAYALAGNMNINLASEPIGHDRKGDPVYLKDIWPSAQEIARAVEQVSTEMFRKEYAEVFEGTAEWKGINVTRSDTYGWQEDSTYIRLSPFFDEMQATPAPVEDIHGARILAMLGDSVTTDHISPAGSIKPDSPAGRYLQGRGVERKDFNSYGSRRGNHEVMMRGTFANIRIRNEMVPGVEGGMTRHLPDSDVVSIYDAAMRYKQEQTPLAVIAGKEYGSGSSRDWAAKGPRLLGIRVVIAESFERIHRSNLIGMGILPLEFPQGVTRKTLGLTGEEKIDIGDLQNLQPGATVPVTLTRADGSQEVVPCRCRIDTATELTYYQNDGILHYVIRNMLK", - "protein_translation_length": 891, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1277" - ], - [ - "gene_synonym", - "ASAP:ABE-0004285" - ], - [ - "gene_synonym", - "JW1269" - ], - [ - "gene_synonym", - "NP_415793.1" - ], - [ - "gene_synonym", - "GeneID:945763" - ], - [ - "gene_synonym", - "EcoGene:EG11331" - ], - [ - "gene_synonym", - "GI:16129238" - ], - [ - "gene_synonym", - "ribA" - ], - [ - "gene_synonym", - "ECK1272" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7I7" - ] - ], - "dna_sequence": "ATGCAGCTTAAACGTGTGGCAGAAGCCAAACTGCCAACCCCATGGGGCGATTTCCTGATGGTGGGATTTGAAGAACTGGCAACCGGACACGATCATGTCGCGCTAGTCTATGGCGATATTTCCGGGCATACCCCGGTACTTGCGCGCGTCCATTCCGAATGTCTGACCGGTGACGCCCTGTTCAGCTTGCGCTGCGATTGTGGCTTCCAGCTCGAAGCGGCATTGACGCAAATTGCCGAGGAAGGCCGTGGTATTTTGCTGTATCACCGTCAGGAAGGTCGTAACATTGGTCTGCTGAATAAAATCCGCGCTTACGCACTGCAGGATCAAGGTTACGATACCGTAGAGGCTAACCACCAGTTAGGCTTCGCCGCTGATGAGCGCGACTTCACTCTTTGCGCTGATATGTTCAAACTCCTTGGCGTCAATGAAGTCCGCTTGTTAACCAATAACCCGAAAAAAGTCGAAATTCTGACCGAAGCAGGGATTAATATTGTTGAACGCGTACCATTGATTGTAGGTCGTAACCCCAATAACGAACATTATCTCGATACCAAAGCCGAGAAAATGGGCCATTTGCTGAACAAATAA", - "dna_sequence_length": 591, - "functions": [ - "GTP cyclohydrolase II" - ], - "id": "CDS_1260", - "location": [ - [ - "NC_000913", - 1339160, - "-", - 591 - ] - ], - "md5": "8a2c1cc0b523819e9fd85faec1bd0dd0", - "parent_gene": "", - "protein_md5": "b7d9b3a05260c79240e03e6dc0fb6f8c", - "protein_translation": "MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004294" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A924" - ], - [ - "gene_synonym", - "b1278" - ], - [ - "gene_synonym", - "GeneID:945863" - ], - [ - "gene_synonym", - "JW1270" - ], - [ - "gene_synonym", - "EcoGene:EG10705" - ], - [ - "gene_synonym", - "GI:16129239" - ], - [ - "gene_synonym", - "pgpB" - ], - [ - "gene_synonym", - "ECK1273" - ], - [ - "gene_synonym", - "NP_415794.1" - ] - ], - "dna_sequence": "ATGCGTTCGATTGCCAGACGTACCGCAGTGGGAGCTGCACTATTGCTTGTCATGCCAGTAGCCGTATGGATTTCTGGCTGGCGTTGGCAACCTGGAGAACAAAGTTGGCTACTAAAAGCGGCTTTTTGGGTTACTGAAACTGTCACCCAGCCCTGGGGCGTCATTACACATTTGATTTTATTCGGCTGGTTTCTCTGGTGTCTGCGTTTTCGCATTAAGGCTGCCTTTGTATTATTTGCCATTCTGGCGGCCGCAATCCTTGTGGGACAAGGCGTTAAATCCTGGATCAAAGACAAAGTCCAGGAACCACGACCTTTTGTTATCTGGCTGGAAAAAACACATCATATTCCGGTTGATGAGTTCTACACTTTAAAGCGAGCAGAACGCGGAAATCTAGTGAAAGAACAGTTGGCTGAAGAGAAAAATATCCCACAATATTTGCGTTCACACTGGCAGAAAGAGACGGGGTTTGCCTTTCCTTCCGGTCACACGATGTTTGCTGCCAGTTGGGCACTGCTGGCCGTTGGTTTGCTGTGGCCGCGTCGGCGAACGTTAACCATTGCTATCTTGCTGGTCTGGGCAACGGGAGTCATGGGAAGCCGCCTGCTGCTCGGGATGCATTGGCCACGCGATCTGGTAGTAGCTACGTTGATTTCGTGGGCGCTGGTGGCGGTGGCAACGTGGCTTGCGCAACGAATTTGTGGGCCATTAACACCACCTGCGGAAGAAAATCGCGAAATAGCGCAACGAGAACAAGAAAGTTAA", - "dna_sequence_length": 765, - "functions": [ - "phosphatidylglycerophosphatase B" - ], - "id": "CDS_1261", - "location": [ - [ - "NC_000913", - 1339330, - "+", - 765 - ] - ], - "md5": "68e5f1b92671c4a65d562a41ff9c05dc", - "parent_gene": "", - "protein_md5": "395f94a9f33cf11ba3dcbc322e63ad12", - "protein_translation": "MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPAEENREIAQREQES", - "protein_translation_length": 254, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yciS" - ], - [ - "gene_synonym", - "GeneID:944936" - ], - [ - "gene_synonym", - "EcoGene:EG13904" - ], - [ - "gene_synonym", - "b1279" - ], - [ - "gene_synonym", - "ASAP:ABE-0004298" - ], - [ - "gene_synonym", - "JW1271" - ], - [ - "gene_synonym", - "NP_415795.1" - ], - [ - "gene_synonym", - "GI:16129240" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACV4" - ], - [ - "gene_synonym", - "lapA" - ], - [ - "gene_synonym", - "ECK1274" - ] - ], - "dna_sequence": "GTGAAATATTTACTCATTTTCTTACTGGTGTTAGCGATCTTCGTGATTTCGGTCACGTTGGGTGCGCAGAACGATCAACAGGTGACGTTTAATTATCTGTTAGCGCAAGGGGAGTACCGTATTTCCACATTGCTGGCGGTATTGTTTGCTGCGGGGTTTGCTATCGGTTGGTTGATTTGTGGCCTGTTCTGGCTGCGAGTTCGTGTTTCCCTGGCGCGCGCTGAACGTAAAATAAAGCGACTGGAAAACCAGCTTTCACCCGCGACTGACGTGGCTGTAGTGCCGCACTCGTCAGCGGCGAAGGAATAA", - "dna_sequence_length": 309, - "functions": [ - "DUF1049 family inner membrane protein, function unknown" - ], - "id": "CDS_1262", - "location": [ - [ - "NC_000913", - 1340243, - "+", - 309 - ] - ], - "md5": "711d7a6feefbd2b061ba817169132b96", - "parent_gene": "", - "protein_md5": "646dfec017e5b46d57250016c5f87672", - "protein_translation": "MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTLLAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKRLENQLSPATDVAVVPHSSAAKE", - "protein_translation_length": 102, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1280" - ], - [ - "gene_synonym", - "ASAP:ABE-0004300" - ], - [ - "gene_synonym", - "NP_415796.1" - ], - [ - "gene_synonym", - "EcoGene:EG12691" - ], - [ - "gene_synonym", - "JW1272" - ], - [ - "gene_synonym", - "GI:16129241" - ], - [ - "gene_synonym", - "yciM" - ], - [ - "gene_synonym", - "lapB" - ], - [ - "gene_synonym", - "GeneID:944858" - ], - [ - "gene_synonym", - "ECK1275" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB58" - ] - ], - "dna_sequence": "ATGCTGGAGTTGTTGTTTCTGCTTTTGCCTGTAGCCGCTGCCTATGGCTGGTATATGGGCCGCAGAAGTGCGCAACAAAACAAGCAAGATGAAGCCAACCGCTTGTCGCGTGATTACGTAGCGGGGGTTAACTTCCTGCTTAGTAATCAACAGGATAAAGCGGTAGACCTGTTTCTCGATATGCTTAAAGAGGATACAGGCACCGTTGAAGCCCACCTTACGCTCGGAAACCTGTTCCGTTCGCGTGGCGAAGTTGATCGCGCTATTCGCATCCATCAGACCCTAATGGAAAGCGCCTCGCTGACCTATGAACAGCGTCTGTTGGCGATTCAACAACTGGGGCGTGATTACATGGCCGCCGGGTTATATGACCGCGCGGAAGACATGTTCAATCAGCTGACCGATGAAACTGACTTCCGCATTGGCGCGCTGCAACAGTTGCTACAAATCTACCAGGCTACCAGTGAGTGGCAGAAAGCAATTGATGTTGCCGAACGCCTGGTGAAGCTGGGTAAAGATAAACAGCGCGTCGAAATTGCCCATTTCTACTGTGAGTTAGCCCTGCAGCATATGGCCAGCGACGATCTCGATCGTGCCATGACCTTGCTAAAAAAAGGGGCGGCGGCAGATAAAAACAGCGCCCGCGTATCCATAATGATGGGACGCGTGTTTATGGCGAAAGGAGAATACGCCAAAGCCGTCGAAAGTCTGCAACGCGTGATATCCCAGGACAGAGAACTGGTCAGCGAAACGCTGGAAATGTTGCAAACCTGCTATCAGCAGTTGGGTAAAACTGCCGAATGGGCAGAATTCCTGCAGCGTGCGGTGGAAGAGAACACCGGTGCCGATGCTGAATTGATGCTTGCTGATATCATCGAAGCGCGCGACGGTAGTGAGGCCGCACAGGTCTATATTACGCGCCAGCTTCAGCGTCATCCGACCATGCGTGTGTTCCATAAGTTAATGGATTACCACTTAAATGAAGCGGAAGAAGGGCGTGCCAAAGAGAGCCTGATGGTGCTGCGTGACATGGTTGGCGAGAAGGTACGTAGTAAGCCTCGTTATCGTTGCCAGAAATGTGGTTTTACCGCATACACCCTCTACTGGCATTGTCCGTCTTGTCGGGCCTGGTCAACCATTAAACCGATTCGCGGTCTTGATGGCCTGTAA", - "dna_sequence_length": 1170, - "functions": [ - "LPS regulatory protein", - "putative modulator of LpxC proteolysis" - ], - "id": "CDS_1263", - "location": [ - [ - "NC_000913", - 1340558, - "+", - 1170 - ] - ], - "md5": "4471d88be964d552fc2e1a1edc33eea6", - "parent_gene": "", - "protein_md5": "17f7620be9160a140f27aa0b26f6c652", - "protein_translation": "MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVNFLLSNQQDKAVDLFLDMLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLTYEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKAIDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMAKGEYAKAVESLQRVISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAVEENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRAKESLMVLRDMVGEKVRSKPRYRCQKCGFTAYTLYWHCPSCRAWSTIKPIRGLDGL", - "protein_translation_length": 389, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415797.1" - ], - [ - "gene_synonym", - "b1281" - ], - [ - "gene_synonym", - "ASAP:ABE-0004304" - ], - [ - "gene_synonym", - "EcoGene:EG10809" - ], - [ - "gene_synonym", - "GeneID:947121" - ], - [ - "gene_synonym", - "JW1273" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08244" - ], - [ - "gene_synonym", - "GI:16129242" - ], - [ - "gene_synonym", - "pyrF" - ], - [ - "gene_synonym", - "ECK1276" - ] - ], - "dna_sequence": "ATGACGTTAACTGCTTCATCTTCTTCCCGCGCTGTTACGAATTCTCCTGTGGTTGTTGCCCTTGATTATCATAATCGTGATGACGCGCTGGCCTTTGTCGACAAGATCGACCCACGCGATTGTCGTCTGAAGGTCGGCAAAGAGATGTTTACATTGTTTGGGCCACAGTTTGTGCGCGAACTTCAACAGCGTGGTTTTGATATCTTTCTTGACCTGAAATTCCACGATATCCCCAACACTGCAGCGCACGCTGTCGCTGCTGCAGCTGACTTAGGCGTGTGGATGGTGAATGTTCATGCCTCTGGTGGGGCGCGTATGATGACCGCAGCGCGTGAGGCACTGGTTCCGTTTGGCAAAGATGCACCGCTTTTGATTGCTGTGACAGTGTTGACCAGCATGGAAGCCAGCGACCTGGTCGATCTTGGCATGACACTGTCACCTGCAGATTATGCAGAACGTCTGGCGGCACTGACGCAAAAATGTGGCCTTGATGGTGTGGTGTGTTCTGCTCAGGAAGCTGTGCGCTTTAAACAGGTATTCGGTCAGGAGTTCAAACTGGTTACGCCGGGCATTCGTCCGCAGGGGAGTGAAGCTGGTGACCAGCGCCGCATTATGACGCCAGAACAGGCGTTGTCGGCTGGTGTTGATTATATGGTGATTGGTCGCCCGGTAACGCAATCGGTAGATCCAGCGCAGACGCTGAAAGCGATCAACGCCTCTTTACAGCGGAGTGCATGA", - "dna_sequence_length": 738, - "functions": [ - "orotidine-5'-phosphate decarboxylase" - ], - "id": "CDS_1264", - "location": [ - [ - "NC_000913", - 1341921, - "+", - 738 - ] - ], - "md5": "9fbccc41e8e16c7ef4f2e6c530d1654c", - "parent_gene": "", - "protein_md5": "b19d93ebd9a9cceb01f43f587d749b0f", - "protein_translation": "MTLTASSSSRAVTNSPVVVALDYHNRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQRSA", - "protein_translation_length": 245, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1282" - ], - [ - "gene_synonym", - "NP_415798.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0004307" - ], - [ - "gene_synonym", - "GI:90111241" - ], - [ - "gene_synonym", - "JW1274" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08245" - ], - [ - "gene_synonym", - "EcoGene:EG11128" - ], - [ - "gene_synonym", - "yciH" - ], - [ - "gene_synonym", - "GeneID:947058" - ], - [ - "gene_synonym", - "ECK1277" - ] - ], - "dna_sequence": "ATGAGTGATTCCAACAGCCGTCTGGTCTACTCAACGGAAACCGGACGTATTGATGAGCCCAAAGCGGCCCCTGTACGCCCTAAAGGCGACGGTGTGGTGCGTATTCAGCGTCAGACCAGTGGACGTAAAGGTAAGGGCGTTTGCCTGATTACCGGTGTCGATCTCGATGATGCCGAACTGACAAAACTTGCAGCGGAACTGAAGAAAAAATGCGGCTGCGGCGGAGCAGTTAAAGATGGAGTTATTGAAATCCAGGGCGATAAGCGTGATTTATTAAAATCACTACTTGAAGCGAAAGGGATGAAGGTAAAACTCGCAGGCGGTTAA", - "dna_sequence_length": 327, - "functions": [ - "initiation factor function partial mimic, SUI1 family" - ], - "id": "CDS_1265", - "location": [ - [ - "NC_000913", - 1342658, - "+", - 327 - ] - ], - "md5": "0d1dcfb7933630ad3557c29cc2aa70de", - "parent_gene": "", - "protein_md5": "3575f3e9a8fc7c545835472ec290d560", - "protein_translation": "MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKGKGVCLITGVDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMKVKLAGG", - "protein_translation_length": 108, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1283" - ], - [ - "gene_synonym", - "EcoGene:EG10679" - ], - [ - "gene_synonym", - "osmB" - ], - [ - "gene_synonym", - "NP_415799.1" - ], - [ - "gene_synonym", - "JW1275" - ], - [ - "gene_synonym", - "GeneID:945866" - ], - [ - "gene_synonym", - "ECK1278" - ], - [ - "gene_synonym", - "GI:16129244" - ], - [ - "gene_synonym", - "ASAP:ABE-0004309" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADA7" - ] - ], - "dna_sequence": "ATGTTTGTAACGAGCAAAAAAATGACCGCGGCTGTTCTGGCAATTACTTTGGCAATGTCTCTGAGTGCCTGTTCTAACTGGTCTAAACGGGACCGCAACACCGCAATCGGCGCGGGTGCAGGGGCATTAGGCGGTGCAGTACTGACCGATGGCAGTACGTTGGGTACATTAGGTGGTGCAGCTGTCGGAGGTGTTATTGGTCACCAGGTCGGTAAATAA", - "dna_sequence_length": 219, - "functions": [ - "osmotically and stress inducible lipoprotein" - ], - "id": "CDS_1266", - "location": [ - [ - "NC_000913", - 1343328, - "-", - 219 - ] - ], - "md5": "6c9bdc1c9d70265898dc44c12fd1e048", - "parent_gene": "", - "protein_md5": "56f79aae5057c73d4c2beb937bad2deb", - "protein_translation": "MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALGGAVLTDGSTLGTLGGAAVGGVIGHQVGK", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004312" - ], - [ - "gene_synonym", - "yciT" - ], - [ - "gene_synonym", - "GeneID:945869" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76034" - ], - [ - "gene_synonym", - "b1284" - ], - [ - "gene_synonym", - "GI:16129245" - ], - [ - "gene_synonym", - "JW1276" - ], - [ - "gene_synonym", - "deoT" - ], - [ - "gene_synonym", - "ECK1279" - ], - [ - "gene_synonym", - "NP_415800.1" - ], - [ - "gene_synonym", - "EcoGene:EG13905" - ] - ], - "dna_sequence": "ATGAATTCCCGACAACAAACTATTCTACAGATGGTCATTGACCAGGGTCAGGTTAGCGTAACCGATCTGGCAAAAGCCACTGGAGTTTCTGAAGTTACCATTCGCCAGGATCTCAACACACTCGAAAAACTGAGTTACCTCCGCCGTGCACATGGCTTTGCTGTTTCGCTTGATAGTGATGACGTCGAAACCCGTATGATGAGCAACTATACGCTGAAGCGTGAACTCGCCGAGTTTGCCGCGTCGCTGGTTCAACCGGGCGAAACCATCTTTATCGAAAATGGCAGCAGCAATGCCCTACTCGCCCGGACTCTGGGCGAGCAGAAGAAAAATGTCACTATCATCACGGTCAGCAGCTACATCGCGCATTTGCTGAAAGACGCGCCTTGTGAAGTTATTTTGCTCGGTGGCGTGTATCAGAAAAAAAGCGAAAGTATGGTTGGCCCTTTGACACGCCAGTGCATCCAACAGGTGCATTTCAGCAAAGCATTTATTGGTATTGATGGCTGGCAACCTGAAACTGGATTTACCGGTCGCGATATGATGCGTACCGATGTGGTCAATGCCGTGCTGGAAAAAGAGTGCGAAGCGATAGTCCTGACTGACAGCTCGAAATTTGGTGCTGTACATTCATACTCCATCGGTCCCGTTGAGCGATTCAATCGCGTGATTACCGATTCGAAAATACGCGCCAGCGATCTGATGCATCTTGAGCACAGTAAACTCACCATTCACGTCGTTGACATTTAA", - "dna_sequence_length": 750, - "functions": [ - "global regulator of transcription", - "DeoR family" - ], - "id": "CDS_1267", - "location": [ - [ - "NC_000913", - 1344346, - "-", - 750 - ] - ], - "md5": "04dfdf89c0dbf062fdd5479134d803f0", - "parent_gene": "", - "protein_md5": "40d1c91d9d8c82c082e6593dc8e5a4d3", - "protein_translation": "MNSRQQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKLSYLRRAHGFAVSLDSDDVETRMMSNYTLKRELAEFAASLVQPGETIFIENGSSNALLARTLGEQKKNVTIITVSSYIAHLLKDAPCEVILLGGVYQKKSESMVGPLTRQCIQQVHFSKAFIGIDGWQPETGFTGRDMMRTDVVNAVLEKECEAIVLTDSSKFGAVHSYSIGPVERFNRVITDSKIRASDLMHLEHSKLTIHVVDI", - "protein_translation_length": 249, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:A5A614" - ], - [ - "gene_synonym", - "YP_001165317.1" - ], - [ - "gene_synonym", - "EcoGene:EG14460" - ], - [ - "gene_synonym", - "yciZ" - ], - [ - "gene_synonym", - "b4596" - ], - [ - "gene_synonym", - "deoL" - ], - [ - "gene_synonym", - "ECK4406" - ], - [ - "gene_synonym", - "GeneID:5061509" - ], - [ - "gene_synonym", - "GI:145698252" - ] - ], - "dna_sequence": "ATGTCTGAATTTGATGCCCAGCGCGTTGCCGAACGTATTGATATTGTGTTAGATATCCTTGTGGCAGGCGATTACCACTCTGCGATCCATAATCTCGAGATACTTAAAGCAGAACTCTTGCGCCAGGTTGCTGAATCTACGCCAGACATCCCGAAGGCACCGTGGGAGATTTAA", - "dna_sequence_length": 174, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1268", - "location": [ - [ - "NC_000913", - 1344609, - "-", - 174 - ] - ], - "md5": "b9df89ba8eebbe69c8419117aabcb5eb", - "parent_gene": "", - "protein_md5": "2f7611af1672614622d32d671b386112", - "protein_translation": "MSEFDAQRVAERIDIVLDILVAGDYHSAIHNLEILKAELLRQVAESTPDIPKAPWEI", - "protein_translation_length": 57, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yciR" - ], - [ - "gene_synonym", - "JW1278" - ], - [ - "gene_synonym", - "ECK1280" - ], - [ - "gene_synonym", - "NP_415801.1" - ], - [ - "gene_synonym", - "b1285" - ], - [ - "gene_synonym", - "GeneID:945868" - ], - [ - "gene_synonym", - "GI:16129246" - ], - [ - "gene_synonym", - "EcoGene:EG13415" - ], - [ - "gene_synonym", - "gmr" - ], - [ - "gene_synonym", - "ASAP:ABE-0004317" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77334" - ] - ], - "dna_sequence": "ATGAAAACCGTTAGGGAGTCCACAACGTTGTACAACTTTCTCGGATCGCACAATCCATACTGGCGGTTGACGGAAAGCAGCGATGTTTTGCGCTTTTCTACCACCGAAACCACAGAACCTGATCGTACATTGCAGTTATCTGCCGAACAGGCTGCTCGCATCAGGGAAATGACGGTCATCACCTCCAGCCTGATGATGAGTCTGACCGTCGATGAAAGCGATCTTTCTGTGCATCTGGTAGGACGAAAAATCAATAAACGGGAATGGGCTGGCAACGCGTCTGCATGGCATGACACACCGGCGGTTGCTCGTGATTTATCACACGGGCTTTCCTTTGCTGAGCAGGTAGTTTCTGAAGCACATTCCGCAATAGTGATTCTCGACAGCCGGGGGAATATCCAACGCTTCAATCGGTTATGTGAAGATTACACAGGGTTGAAAGAACACGACGTCATTGGGCAAAGCGTGTTTAAACTGTTTATGAGCCGTCGTGAAGCTGCGGCATCCAGGCGCAATAACCGTGTATTTTTTCGAAGCGGCAATGCATATGAAGTCGAACTGTGGATACCAACATGTAAAGGCCAGCGGCTGTTTCTGTTTCGCAATAAATTTGTCCACAGCGGCAGTGGCAAAAACGAGATTTTTTTAATCTGTTCCGGCACCGACATTACCGAAGAGCGCCGCGCTCAGGAGCGACTGCGTATTCTGGCAAATACCGACAGTATCACCGGACTGCCGAATCGTAACGCAATGCAGGATTTAATCGATCACGCTATTAATCATGCAGATAACAATAAAGTTGGGGTTGTGTATCTTGATTTGGATAATTTCAAAAAGGTCAACGACGCCTATGGGCATTTGTTTGGTGACCAGTTATTACGCGACGTGTCATTGGCTATTTTAAGCTGTCTCGAACATGACCAGGTGTTGGCGCGTCCAGGTGGGGATGAGTTTCTGGTACTGGCATCCAACACCTCACAAAGCGCGCTGGAAGCAATGGCATCACGAATTTTGACCCGCTTACGGCTCCCCTTTCGCATTGGTTTAATTGAAGTTTATACCAGCTGTTCAGTAGGTATTGCACTCTCTCCCGAACATGGTTCAGACAGCACGGCTATTATTCGTCACGCCGACACAGCAATGTACACAGCGAAGGAAGGCGGACGAGGACAATTTTGCGTTTTTACCCCAGAAATGAATCAACGGGTATTTGAATATCTCTGGCTGGATACCAACTTGCGTAAAGCACTGGAAAACGATCAGTTGGTTATTCACTATCAACCGAAAATCACCTGGCGTGGCGAAGTGCGCAGTCTGGAAGCACTAGTACGTTGGCAGTCACCTGAACGTGGGTTGATTCCACCGTTGGACTTCATTTCCTACGCCGAAGAGTCAGGGCTAATTGTGCCTTTAGGCCGTTGGGTGATTCTCGATGTCGTACGCCAGGTGGCAAAGTGGCGGGATAAAGGCATAAACCTGCGAGTGGCGGTAAATATTTCTGCACGTCAGCTCGCCGATCAAACCATTTTCACCGCCCTGAAACAGGTTCTCCAGGAACTCAATTTTGAATACTGCCCTATAGATGTTGAACTGACAGAGAGTTGTCTGATTGAGAATGATGAACTGGCACTGTCTGTTATTCAACAATTTAGCCAACTAGGTGCGCAAGTGCATCTGGATGATTTTGGTACCGGCTACTCTTCACTTTCGCAACTGGCGCGCTTTCCGATCGATGCCATCAAACTTGACCAGGTTTTTGTTCGAGATATTCACAAACAACCTGTCTCGCAGTCACTGGTCCGGGCGATCGTCGCTGTGGCCCAGGCATTGAATCTTCAGGTGATCGCCGAAGGTGTAGAGAGTGCAAAGGAAGATGCTTTTTTAACCAAGAACGGGATCAATGAGCGGCAAGGATTTTTGTTTGCCAAACCGATGCCCGCCGTCGCCTTCGAACGCTGGTATAAACGCTATCTGAAGCGCGCATAA", 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"MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTLQLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA", - "protein_translation_length": 661, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:7751616" - ], - [ - "gene_synonym", - "EcoGene:EG14477" - ], - [ - "gene_synonym", - "b4672" - ], - [ - "gene_synonym", - "YP_002791239.1" - ], - [ - "gene_synonym", - "GI:226524710" - ], - [ - "gene_synonym", - "ymiB" - ], - 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"gene_synonym", - "UniProtKB/Swiss-Prot:P30850" - ], - [ - "gene_synonym", - "ASAP:ABE-0004320" - ] - ], - "dna_sequence": "ATGTTTCAGGACAACCCGCTGCTAGCGCAGCTTAAACAGCAACTGCATTCCCAGACGCCACGCGCTGAAGGGGTGGTAAAAGCCACAGAAAAAGGCTTTGGCTTCCTGGAAGTCGACGCGCAAAAAAGTTATTTCATTCCGCCGCCGCAGATGAAAAAAGTCATGCATGGCGACCGAATTATCGCGGTGATCCACAGTGAAAAAGAACGTGAATCCGCAGAGCCAGAAGAACTGGTTGAACCGTTCCTGACTCGTTTCGTGGGTAAGGTTCAGGGCAAAAATGACCGTCTGGCCATCGTTCCTGATCATCCACTCTTAAAAGACGCCATTCCTTGCCGCGCAGCCCGTGGCCTGAACCACGAGTTTAAAGAAGGCGACTGGGCGGTTGCCGAAATGCGCCGTCATCCGCTGAAAGGCGATCGTTCTTTCTATGCAGAACTGACACAATACATCACTTTTGGTGACGATCACTTTGTACCGTGGTGGGTTACCCTTGCACGCCATAATCTGGAAAAAGAAGCACCAGACGGCGTCGCTACCGAAATGCTCGATGAAGGTCTGGTTCGTGAAGATCTGACCGCGCTGGATTTTGTCACCATCGACAGTGCCAGCACAGAAGATATGGATGACGCCCTTTTCGCTAAGGCGTTGCCGGATGACAAACTTCAGCTGATTGTGGCGATTGCCGATCCAACCGCGTGGATTGCTGAAGGCAGCAAGCTGGACAAAGCCGCGAAAATTCGCGCATTCACCAACTATCTGCCTGGCTTCAACATCCCTATGCTGCCTCGCGAGCTTTCTGACGATCTCTGCTCACTGCGCGCCAATGAAGTCCGCCCGGTACTGGCATGCCGCATGACGCTCTCCGCTGATGGCACCATTGAAGATAATATCGAATTCTTTGCCGCCACCATCGAATCCAAAGCAAAGCTGGTGTATGACCAGGTTTCTGACTGGCTGGAAAATACCGGTGACTGGCAGCCTGAAAGTGAAGCAATTGCCGAACAAGTCCGTTTGCTAGCGCAAATTTGCCAACGCCGCGGCGAGTGGCGTCATAACCACGCACTGGTGTTTAAAGATCGCCCGGATTACCGCTTTATTCTCGGTGAAAAAGGTGAAGTGCTGGATATCGTCGCCGAGCCTCGTCGCATTGCCAACCGTATCGTCGAAGAAGCGATGATTGCCGCTAACATTTGTGCGGCCCGCGTACTGCGCGATAAGCTCGGTTTTGGCATCTATAACGTGCATATGGGCTTTGATCCGGCGAATGCCGACGCGCTGGCAGCGTTGCTGAAAACGCACGGTCTGCATGTCGATGCCGAAGAAGTGCTCACGCTGGACGGTTTCTGCAAACTGCGTCGTGAACTGGACGCGCAACCAACTGGTTTCCTCGACAGCCGCATTCGTCGCTTCCAGTCATTTGCTGAAATTAGCACTGAACCCGGTCCTCACTTTGGCCTCGGTCTGGAAGCATACGCCACCTGGACTTCGCCGATCCGTAAATATGGCGACATGATCAACCACCGTCTGCTGAAAGCGGTTATCAAAGGCGAAACTGCGACGCGCCCACAGGATGAAATCACTGTCCAAATGGCCGAGCGTCGCCGTCTCAACCGGATGGCAGAACGTGATGTTGGTGACTGGTTATACGCACGCTTCCTGAAAGACAAAGCCGGGACCGACACCCGTTTCGCAGCGGAAATTGTCGATATCAGCCGTGGCGGCATGCGTGTTCGTTTGGTTGATAACGGCGCTATCGCCTTTATTCCGGCACCTTTCTTACACGCTGTGCGCGATGAACTGGTTTGCAGCCAGGAAAACGGCACTGTACAAATTAAAGGTGAAACGGTTTACAAAGTGACTGACGTTATTGACGTCACTATTGCCGAAGTCCGCATGGAAACCCGCAGCATTATTGCGCGCCCGGTCGCGTAA", 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"CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yciW" - ], - [ - "gene_synonym", - "ECK1282" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76035" - ], - [ - "gene_synonym", - "b1287" - ], - [ - "gene_synonym", - "GI:90111242" - ], - [ - "gene_synonym", - "ASAP:ABE-0004322" - ], - [ - "gene_synonym", - "GeneID:945859" - ], - [ - "gene_synonym", - "EcoGene:EG14262" - ], - [ - "gene_synonym", - "NP_415803.2" - ], - [ - "gene_synonym", - "JW5200" - ] - ], - "dna_sequence": "ATGGAACAACGCCACATCACCGGCAAAAGCCACTGGTATCATGAAACGCAATCCAGTACTACGGAGTATGACGTTCTGCCTCTGGTCCCGGAAGCCGCAAAGGTCAGCGATCCCTTTCTACTCGACGTGATCCTTGAAAAAGAAACGCTGGCCCCCTTCCTTTCATGGCTGGACCCTGCGCGTGTTCTTGCAGTGGATTTGTTCCCTGACCAGCTTACCGTGACCCGTTCACAGACCTTCACCGCTTATGAACGCTTGTCGACGGCCCTGACGGTTGCTCAGGTTTGCGGCGTCCAGCGGTTATGTAACTACTATTCGGCGCGACTTACGCCGCTCCCCGGGCCTGATTCCACCAGGGAAAGTAATCATCGGTTGGCACAAATCACGCAATATGCCCGCCAACTGGCTAGCTCGCCTTCTATTATCGACAACCGATCGCGCCAGCATCTGAATGACGTCGGTCTTACTGCCTGGGACTGTGTGATCATTAGCCAAATCATTGGTTTTATTGGCTTTCAGGCGCGGACAATTGCGACATTTCAGGCTTATCTCGGGCATCCGGTACGCTGGTTACCCGGGCTGGAGATACAAAACTACGCCGACGCGTCACTGTTTGCTGATGAATCATTACGCTGGCGAAGCAGCTATGAGGTGGAAAAACTACCTGAAGAGCACACAAAAAGTTCAACTGCAGAACTTTGCCAACTGGCCGAAATACTCTCTCTCCACCCTATTTCACTTTCCCTTCTCGAAAAGTTGTTAAACAGCACACGGGGCAATACACAGCCGGATAATCAGCTTGCGGCGTTGTTATGCGCGCGTATAAATGGCAGTCCTGCTTGTTTTGCCACCTGTATGGATTCATCAAATGAATATAAAAAAATCAGCACCCTTATGCGCAAGGGCGAAAATGAAATTAACCAATGGGCTGACCGTCATTCTGTTGAGCGCGCTACCGTTCAGGCGATACAATGGCTGACCCGAGCACCCGATCGCTTTAGCGCCGCCCAGTTCAGCCCTTTACTCGAACACGAAAAATCATCAACGCAGATTATTAATCTGCTGGTATGGAGCGGGCTGTGTGGCTGGATAAATCGCTTAAAAATCGCGTTGGGTGAGACATATTAA", - "dna_sequence_length": 1128, - "functions": [ - "putative oxidoreductase" - ], - "id": "CDS_1272", - "location": [ - [ - "NC_000913", - 1350107, - "-", - 1128 - ] - ], - "md5": "3580a2dca77f808023cda216cd92e3ec", - "parent_gene": "", - "protein_md5": "992c7121fd7b92a33849ca8a9138e991", - "protein_translation": "MEQRHITGKSHWYHETQSSTTEYDVLPLVPEAAKVSDPFLLDVILEKETLAPFLSWLDPARVLAVDLFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLCNYYSARLTPLPGPDSTRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTAWDCVIISQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESLRWRSSYEVEKLPEEHTKSSTAELCQLAEILSLHPISLSLLEKLLNSTRGNTQPDNQLAALLCARINGSPACFATCMDSSNEYKKISTLMRKGENEINQWADRHSVERATVQAIQWLTRAPDRFSAAQFSPLLEHEKSSTQIINLLVWSGLCGWINRLKIALGETY", - "protein_translation_length": 375, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEK4" - ], - [ - "gene_synonym", - "JW1281" - ], - [ - "gene_synonym", - "NP_415804.1" - ], - [ - "gene_synonym", - "EcoGene:EG11528" - ], - [ - "gene_synonym", - "b1288" - ], - [ - "gene_synonym", - "ASAP:ABE-0004327" - ], - [ - "gene_synonym", - "GI:16129249" - ], - [ - "gene_synonym", - "gts" - ], - [ - "gene_synonym", - "GeneID:945870" - ], - [ - "gene_synonym", - "envM" - ], - [ - "gene_synonym", - "qmeA" - ], - [ - "gene_synonym", - "fabI" - ], - [ - "gene_synonym", - "ECK1283" - ] - ], - "dna_sequence": "ATGGGTTTTCTTTCCGGTAAGCGCATTCTGGTAACCGGTGTTGCCAGCAAACTATCCATCGCCTACGGTATCGCTCAGGCGATGCACCGCGAAGGAGCTGAACTGGCATTCACCTACCAGAACGACAAACTGAAAGGCCGCGTAGAAGAATTTGCCGCTCAATTGGGTTCTGACATCGTTCTGCAGTGCGATGTTGCAGAAGATGCCAGCATCGACACCATGTTCGCTGAACTGGGGAAAGTTTGGCCGAAATTTGACGGTTTCGTACACTCTATTGGTTTTGCACCTGGCGATCAGCTGGATGGTGACTATGTTAACGCCGTTACCCGTGAAGGCTTCAAAATTGCCCACGACATCAGCTCCTACAGCTTCGTTGCAATGGCAAAAGCTTGCCGCTCCATGCTGAATCCGGGTTCTGCCCTGCTGACCCTTTCCTACCTTGGCGCTGAGCGCGCTATCCCGAACTACAACGTTATGGGTCTGGCAAAAGCGTCTCTGGAAGCGAACGTGCGCTATATGGCGAACGCGATGGGTCCGGAAGGTGTGCGTGTTAACGCCATCTCTGCTGGTCCGATCCGTACTCTGGCGGCCTCCGGTATCAAAGACTTCCGCAAAATGCTGGCTCATTGCGAAGCCGTTACCCCGATTCGCCGTACCGTTACTATTGAAGATGTGGGTAACTCTGCGGCATTCCTGTGCTCCGATCTCTCTGCCGGTATCTCCGGTGAAGTGGTCCACGTTGACGGCGGTTTCAGCATTGCTGCAATGAACGAACTCGAACTGAAATAA", - "dna_sequence_length": 789, - "functions": [ - "enoyl-[acyl-carrier-protein] reductase, NADH-dependent" - ], - "id": "CDS_1273", - "location": [ - [ - "NC_000913", - 1351039, - "-", - 789 - ] - ], - "md5": "70f8248c81de9b519e3cd55216454e2d", - "parent_gene": "", - "protein_md5": "17517a241b56a96f753c1748f4deac12", - "protein_translation": "MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNELELK", - "protein_translation_length": 262, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1282" - ], - [ - "gene_synonym", - "ycjD" - ], - [ - "gene_synonym", - "EcoGene:EG12653" - ], - [ - "gene_synonym", - "b1289" - ], - [ - "gene_synonym", - "ECK1284" - ], - [ - "gene_synonym", - "GeneID:945871" - ], - [ - "gene_synonym", - "NP_415805.1" - ], - [ - "gene_synonym", - "GI:16129250" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45736" - ], - [ - "gene_synonym", - "ASAP:ABE-0004333" - ] - ], - "dna_sequence": "GTGATAGATAAAATTAAATCAAATGCGCGTGATTTAAGACGCAATCTCACTTTGCAGGAACGAAAGCTCTGGCGATATCTTCGCAGCCGACGTTTTAGTGATTTCAAATTTCGCCGTCAACATCCAGTGGGGAGCTACATTCTCGATTTTGCTTGCTGCTCGGCGCGTGTAGTCGTTGAGCTGGATGGTGGGCAGCATGATTTAGCAGTTGCCTATGATTCCAGGCGCACTAGCTGGCTTGAGTCGCAGGGCTGGACCGTGCTGCGTTTCTGGAATAACGAGATTGATTGTAATGAGGAGACGGTGCTGGAGAATATTCTGCAGGAACTGAACCGCCGGTCACCCTCTCCCTGA", - "dna_sequence_length": 354, - "functions": [ - "DUF559 family endonuclease-related protein" - ], - "id": "CDS_1274", - "location": [ - [ - "NC_000913", - 1351760, - "-", - 354 - ] - ], - "md5": "165d8d5e89f44f673da4e5033ab2d1d4", - "parent_gene": "", - "protein_md5": "61e102d9979cd9b763b6ad3be17d032f", - "protein_translation": "MIDKIKSNARDLRRNLTLQERKLWRYLRSRRFSDFKFRRQHPVGSYILDFACCSARVVVELDGGQHDLAVAYDSRRTSWLESQGWTVLRFWNNEIDCNEETVLENILQELNRRSPSP", - "protein_translation_length": 117, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945335" - ], - [ - "gene_synonym", - "NP_415806.1" - ], - [ - "gene_synonym", - "JW1283" - ], - [ - "gene_synonym", - "b1290" - ], - [ - "gene_synonym", - "sapF" - ], - [ - "gene_synonym", - "ECK1285" - ], - [ - "gene_synonym", - "ASAP:ABE-0004339" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAH8" - ], - [ - "gene_synonym", - "GI:16129251" - ], - [ - "gene_synonym", - "EcoGene:EG12305" - ] - ], - "dna_sequence": "ATGATCGAAACGCTGCTTGAAGTGCGTAATTTAAGTAAAACGTTCCGCTACCGGACCGGCTGGTTTCGTCGTCAGACCGTAGAAGCGGTAAAACCCTTGAGCTTTACGCTACGTGAAGGCCAGACACTGGCGATTATTGGCGAGAATGGTTCGGGTAAATCCACGCTGGCAAAAATGCTGGCGGGAATGATAGAGCCTACCAGCGGCGAGTTATTGATTGACGATCATCCACTGCATTTTGGCGATTATTCCTTCCGCAGTCAGCGTATTCGCATGATTTTTCAGGATCCTTCGACCTCGTTGAATCCCCGTCAACGTATCTCGCAAATTCTGGATTTTCCACTGCGCCTGAACACCGACCTGGAACCGGAACAGCGTCGCAAACAGATTATTGAAACGATGCGTATGGTTGGGCTGCTACCGGATCACGTCAGTTACTATCCGCATATGTTGGCACCCGGACAAAAACAGCGTCTGGGTCTGGCGCGCGCGCTGATATTGCGCCCAAAAGTCATTATTGCCGATGAAGCCCTCGCTTCACTGGATATGTCGATGCGTTCGCAGTTGATTAATCTGATGCTGGAATTACAGGAAAAACAGGGCATTTCGTATATTTATGTTACCCAGCATATCGGAATGATGAAGCACATTAGCGACCAGGTGCTGGTGATGCATCAGGGCGAGGTTGTCGAGCGAGGCAGCACCGCGGATGTGCTGGCATCGCCGCTGCATGAACTCACCAAACGGCTGATTGCCGGTCATTTTGGCGAGGCATTGACGGCGGATGCGTGGCGTAAAGATCGCTAA", - "dna_sequence_length": 807, - "functions": [ - "antimicrobial peptide ABC transporter ATPase" - ], - "id": "CDS_1275", - "location": [ - [ - "NC_000913", - 1352634, - "-", - 807 - ] - ], - "md5": "0d7a20afb1762a86b2d799fcdb1bbaf9", - "parent_gene": "", - "protein_md5": "5b86580b2e5935cabca91c91c0a12f7b", - "protein_translation": "MIETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHISDQVLVMHQGEVVERGSTADVLASPLHELTKRLIAGHFGEALTADAWRKDR", - "protein_translation_length": 268, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1291" - ], - [ - "gene_synonym", - "trkE" - ], - [ - "gene_synonym", - "GeneID:946203" - ], - [ - "gene_synonym", - "NP_415807.1" - ], - [ - "gene_synonym", - "JW1284" - ], - [ - "gene_synonym", - "sapD" - ], - [ - "gene_synonym", - "ASAP:ABE-0004342" - ], - [ - "gene_synonym", - "ECK1286" - ], - [ - "gene_synonym", - "GI:16129252" - ], - [ - "gene_synonym", - "EcoGene:EG12304" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAH4" - ] - ], - "dna_sequence": "ATGCCATTACTCGATATTCGTAACCTGACCATTGAATTTAAAACCGGTGATGAGTGGGTTAAAGCCGTCGACCGGGTAAGTATGACCTTAACCGAAGGTGAAATCCGCGGTCTTGTTGGTGAATCCGGTTCCGGCAAGAGTTTGATTGCGAAAGCGATTTGTGGGGTGAATAAAGATAACTGGCGTGTTACTGCTGACCGTATGCGTTTTGATGATATCGATTTGCTGCGTCTCTCCGCACGCGAACGGCGCAAACTGGTTGGCCATAACGTGTCGATGATTTTCCAGGAACCGCAGTCGTGTCTTGACCCTTCAGAACGTGTGGGCCGCCAGTTGATGCAAAACATCCCAGCCTGGACCTATAAAGGCCGTTGGTGGCAGCGTTTTGGCTGGCGCAAACGCCGTGCCATTGAACTGCTGCACCGCGTGGGGATTAAAGATCACAAAGATGCGATGCGCAGTTTTCCCTATGAGTTGACCGAAGGTGAATGTCAGAAAGTGATGATAGCCATTGCACTGGCGAATCAACCGCGTCTGCTGATTGCTGACGAACCGACCAACTCAATGGAGCCAACAACCCAGGCGCAAATCTTTCGCCTGCTGACGCGTCTCAACCAAAACAGCAATACCACTATTTTGCTTATCAGCCATGACTTACAAATGCTTAGCCAATGGGCGGATAAAATTAACGTGCTTTACTGCGGTCAAACAGTGGAAACCGCGCCGAGTAAGGAGTTGGTGACGATGCCACATCATCCTTATACCCAGGCGCTGATCCGCGCGATACCAGACTTCGGCAGCGCGATGCCGCATAAAAGTCGCCTCAATACGCTGCCCGGCGCTATCCCACTGCTGGAACAGTTACCGATTGGTTGTCGTCTGGGGCCACGTTGCCCGTATGCACAACGAGAATGCATTGTGACGCCACGTTTGACGGGGGCGAAAAATCATCTCTATGCCTGTCATTTCCCGCTGAACATGGAGAAAGAGTGA", - "dna_sequence_length": 993, - "functions": [ - "antimicrobial peptide ABC transporter ATPase" - ], - "id": "CDS_1276", - "location": [ - [ - "NC_000913", - 1353628, - "-", - 993 - ] - ], - "md5": "fcd0807cf1b39a97b08aa779a424c8b8", - "parent_gene": "", - "protein_md5": "8363268fa7b8ab3c96eca838750c1a4c", - "protein_translation": "MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHDLQMLSQWADKINVLYCGQTVETAPSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLEQLPIGCRLGPRCPYAQRECIVTPRLTGAKNHLYACHFPLNMEKE", - "protein_translation_length": 330, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1292" - ], - [ - "gene_synonym", - "JW1285" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGH5" - ], - [ - "gene_synonym", - "ASAP:ABE-0004348" - ], - [ - "gene_synonym", - "EcoGene:EG20256" - ], - [ - "gene_synonym", - "ECK1287" - ], - [ - "gene_synonym", - "NP_415808.1" - ], - [ - "gene_synonym", - "GeneID:945266" - ], - [ - "gene_synonym", - "GI:16129253" - ], - [ - "gene_synonym", - "sapC" - ] - ], - "dna_sequence": "ATGCCTTACGATAGCGTATACAGCGAAAAGCGCCCGCCGGGCACGCTGCGTACCGCCTGGCGCAAATTTTATAGTGACGCCTCTGCGATGGTCGGCCTGTACGGCTGCGCGGGGCTGGCTGTACTGTGTATTTTTGGCGGCTGGTTTGCGCCTTACGGCATCGACCAGCAATTTCTCGGTTATCAATTATTGCCGCCGTCATGGTCGCGCTATGGCGAAGTTTCTTTCTTCCTGGGGACTGACGACCTCGGACGCGATGTTTTAAGCCGTTTACTGAGCGGAGCTGCGCCAACCGTGGGTGGCGCATTTGTGGTGACGCTTGCCGCGACGATCTGTGGCCTGGTACTGGGCACCTTCGCCGGGGCGACACACGGCCTCCGCTCAGCGGTGCTTAACCATATTCTGGATACCTTACTGGCGATCCCTTCGCTGCTGTTGGCAATTATCGTTGTAGCGTTTGCCGGACCGAGTTTGTCCCACGCTATGTTTGCTGTCTGGCTGGCATTGCTGCCGCGTATGGTACGTTCGATTTACAGCATGGTGCATGACGAACTGGAAAAAGAGTACGTTATCGCCGCCCGTCTGGATGGCGCATCAACGCTGAATATTCTCTGGTTTGCTGTGATGCCAAACATCACCGCCGGGCTGGTCACCGAGATCACCCGCGCACTGTCGATGGCAATTCTCGATATCGCCGCGCTGGGCTTTCTCGATCTCGGCGCACAACTCCCCTCGCCTGAATGGGGAGCGATGCTCGGTGATGCGCTGGAACTGATTTATGTCGCCCCGTGGACTGTCATGCTGCCAGGTGCGGCAATTATGATTAGCGTGTTGTTGGTTAACCTCCTTGGCGATGGCGTTCGTCGTGCGATTATTGCGGGGGTGGAATAA", - "dna_sequence_length": 891, - "functions": [ - "antimicrobial peptide transport ABC transporter permease" - ], - "id": "CDS_1277", - "location": [ - [ - "NC_000913", - 1354518, - "-", - 891 - ] - ], - "md5": "8c58037efdc3ecbad00de327325252a5", - "parent_gene": "", - "protein_md5": "7b1f50fbc9eeb38883ab3222adb10ef5", - "protein_translation": "MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCIFGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAIIAGVE", - "protein_translation_length": 296, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1288" - ], - [ - "gene_synonym", - "b1293" - ], - [ - "gene_synonym", - "JW1286" - ], - [ - "gene_synonym", - "ASAP:ABE-0004350" - ], - [ - "gene_synonym", - "NP_415809.1" - ], - [ - "gene_synonym", - "sapB" - ], - [ - "gene_synonym", - "EcoGene:EG20255" - ], - [ - "gene_synonym", - "GI:16129254" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGH3" - ], - [ - "gene_synonym", - "GeneID:946191" - ] - ], - "dna_sequence": "ATGATTATCTTCACCTTACGCCGCATTTTGTTATTGATTGTCACCTTGTTCCTGCTGACCTTCGTTGGCTTCAGCTTGAGCTATTTCACCCCTCATGCGCCGTTACAAGGCGCGTCACTGTGGAATGCCTGGGTGTTCTGGTTTAACGGCCTGATCCACTGGGATTTTGGTGTTTCCAGCATTAACGGTCAACCGATTGCCGAACAGTTAAAAGAGGTCTTCCCGGCGACGATGGAACTGTGCATCCTCGCCTTCGGTTTTGCGCTGATTGTTGGCATCCCCGTGGGGATGATTGCCGGGATTACGCGCCATAAGTGGCAGGATAACTTGATCAACGCCATCGCCTTACTGGGCTTTTCAATCCCGGTGTTCTGGCTGGCGCTTCTGTTGACGCTGTTTTGTTCACTCACGCTAGGTTGGTTGCCCGTTTCAGGGCGTTTCGATCTGCTCTACGAAGTGAAACCGATTACCGGTTTTGCGTTGATTGATGCCTGGCTTTCGGACTCACCATGGCGGGATGAAATGATCATGAGCGCAATCCGCCATATGATATTGCCCGTGATCACCCTGTCGGTTGCGCCAACAACTGAAGTGATCCGCCTGATGCGTATCAGCACTATCGAAGTGTATGACCAGAACTATGTAAAAGCGGCGGCGACCCGCGGTTTGTCGCGCTTTACTATTTTGCGTCGCCACGTTCTGCATAACGCGTTACCGCCGGTTATTCCTCGCCTGGGCTTACAGTTTTCCACCATGCTGACGCTGGCGATGATCACCGAAATGGTTTTTAGCTGGCCGGGTTTAGGGCGCTGGTTAATTAACGCCATCCGCCAGCAGGATTACGCAGCCATTTCCGCCGGAGTGATGGTGTGTGGCTCACTGGTCATTATTGTTAACGTGATTTCTGATATTTTGGGTGCCATGGCTAACCCTCTGAAACATAAGGAATGGTATGCCTTACGATAG", - "dna_sequence_length": 966, - "functions": [ - "antimicrobial peptide transport ABC transporter permease" - ], - "id": "CDS_1278", - "location": [ - [ - "NC_000913", - 1355470, - "-", - 966 - ] - ], - "md5": "39faba8c4ea19226e7b4f2a35889dbdc", - "parent_gene": "", - "protein_md5": "c7cf9937eba6d834978ea868779e2a73", - "protein_translation": "MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAWVFWFNGLIHWDFGVSSINGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGITRHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFALIDAWLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAAATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAIRQQDYAAISAGVMVCGSLVIIVNVISDILGAMANPLKHKEWYALR", - "protein_translation_length": 321, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1289" - ], - [ - "gene_synonym", - "JW1287" - ], - [ - "gene_synonym", - "ASAP:ABE-0004354" - ], - [ - "gene_synonym", - "sapA" - ], - [ - "gene_synonym", - "EcoGene:EG20254" - ], - [ - "gene_synonym", - "GeneID:945873" - ], - [ - "gene_synonym", - "GI:16129255" - ], - [ - "gene_synonym", - "NP_415810.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47622" - ], - [ - "gene_synonym", - "b1294" - ] - ], - "dna_sequence": "ATGCGCCAGGTATTATCGTCTCTTTTGGTGATTGCTGGACTTGTGAGTGGTCAGGCAATCGCCGCGCCTGAATCTCCCCCGCATGCTGATATCCGCGACAGCGGTTTTGTCTATTGCGTCAGCGGGCAAGTCAACACCTTTAACCCATCCAAAGCGAGCAGTGGGTTAATTGTCGATACCCTTGCCGCCCAGTTTTATGATCGACTGCTGGATGTCGATCCCTATACCTATCGCCTGATGCCGGAACTTGCCGAAAGCTGGGAAGTACTCGACAACGGCGCGACCTATCGCTTCCACCTGCGTCGCGATGTTCCGTTTCAAAAAACCGACTGGTTTACTCCCACTCGTAAAATGAATGCCGACGATGTGGTGTTTACCTTCCAGCGAATTTTTGACCGCAACAACCCGTGGCATAACGTCAACGGCAGCAACTTCCCCTACTTCGACAGCCTGCAATTTGCCGATAACGTGAAAAGCGTCCGCAAACTGGATAATCATACCGTTGAGTTCCGACTCGCCCAGCCGGATGCTTCTTTTTTGTGGCACCTCGCAACCCATTATGCTTCGGTCATGTCGGCAGAATATGCCCGGAAGTTAGAGAAAGAAGATCGCCAGGAGCAACTCGACCGTCAACCGGTCGGCACCGGTCCGTATCAGTTGTCGGAATACCGCGCCGGGCAATTTATTCGCCTACAACGTCATGATGACTTCTGGCGCGGTAAACCGTTAATGCCGCAGGTAGTGGTGGATTTAGGCTCCGGCGGCACCGGACGTCTGTCGAAACTCCTGACCGGGGAATGCGACGTTCTGGCCTGGCCTGCTGCCAGCCAGCTATCCATTTTGCGTGACGACCCGCGCTTGCGTTTAACGCTGCGTCCTGGGATGAACGTCGCCTATCTGGCATTTAACACCGCCAAACCGCCGCTAAATAATCCCGCTGTCCGCCATGCGCTGGCACTGGCGATTAATAACCAGCGCCTGATGCAATCCATCTATTATGGTACGGCTGAAACGGCGGCCTCTATTTTACCGCGCGCCTCGTGGGCCTATGACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGTTGAAGTCGTTGGGGCTGGAAAATTTAACGCTGAAACTGTGGGTGCCCACACGTTCGCAGGCGTGGAACCCCAGTCCACTGAAAACTGCCGAACTGATTCAGGCGGATATGGCGCAGGTTGGCGTAAAAGTGGTGATTGTGCCGGTAGAAGGTCGCTTTCAGGAGGCGCGGTTGATGGATATGAGCCATGATCTGACGTTATCCGGTTGGGCGACGGACAGTAACGACCCGGACAGTTTCTTCCGTCCGTTACTGAGCTGCGCGGCAATTCATTCGCAGACCAACCTCGCCCACTGGTGCGATCCGAAATTCGACAGCGTATTGCGTAAGGCGCTCTCTTCGCAGCAGCTGGCGGCGCGTATTGAAGCCTATGACGAAGCGCAGAGTATTCTGGCGCAGGAATTGCCCATTTTGCCGCTGGCGTCGTCATTGCGTTTGCAGGCCTATCGGTACGATATCAAAGGTCTGGTACTTAGCCCGTTTGGTAACGCCTCCTTTGCTGGGGTGTATCGCGAGAAACAGGATGAGGTGAAAAAACCATGA", - "dna_sequence_length": 1644, - "functions": [ - "antimicrobial peptide transport ABC transporter periplasmic binding protein" - ], - "id": "CDS_1279", - "location": [ - [ - "NC_000913", - 1357110, - "-", - 1644 - ] - ], - "md5": "0cf08a93a9145426b7c09c8f7f137acb", - "parent_gene": "", - "protein_md5": "3a35ecfae93ed0f514fe6665bc105bdc", - "protein_translation": "MRQVLSSLLVIAGLVSGQAIAAPESPPHADIRDSGFVYCVSGQVNTFNPSKASSGLIVDTLAAQFYDRLLDVDPYTYRLMPELAESWEVLDNGATYRFHLRRDVPFQKTDWFTPTRKMNADDVVFTFQRIFDRNNPWHNVNGSNFPYFDSLQFADNVKSVRKLDNHTVEFRLAQPDASFLWHLATHYASVMSAEYARKLEKEDRQEQLDRQPVGTGPYQLSEYRAGQFIRLQRHDDFWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAASQLSILRDDPRLRLTLRPGMNVAYLAFNTAKPPLNNPAVRHALALAINNQRLMQSIYYGTAETAASILPRASWAYDNEAKITEYNPAKSREQLKSLGLENLTLKLWVPTRSQAWNPSPLKTAELIQADMAQVGVKVVIVPVEGRFQEARLMDMSHDLTLSGWATDSNDPDSFFRPLLSCAAIHSQTNLAHWCDPKFDSVLRKALSSQQLAARIEAYDEAQSILAQELPILPLASSLRLQAYRYDIKGLVLSPFGNASFAGVYREKQDEVKKP", - "protein_translation_length": 547, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1295" - ], - [ - "gene_synonym", - "NP_415811.1" - ], - [ - "gene_synonym", - "JW1288" - ], - [ - "gene_synonym", - "ymjA" - ], - [ - "gene_synonym", - "GI:16129256" - ], - [ - "gene_synonym", - "ECK1290" - ], - [ - "gene_synonym", - "EcoGene:EG14295" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACV8" - ], - [ - "gene_synonym", - "GeneID:945874" - ], - [ - "gene_synonym", - "ASAP:ABE-0004359" - ] - ], - "dna_sequence": "ATGAACCACGATATCCCGCTAAAATATTTTGATATTGCCGATGAGTACGCGACCGAATGCGCAGAGCCTGTCGCAGAGGCTGAACGCACACCGCTGGCCCACTACTTCCAGTTACTGCTCACCCGTTTGATGAACAATGAAGAGATCAGCGAAGAAGCCCAACATGAAATGGCTGCTGAAGCGGGGATTAATCCCGTACGCATTGATGAGATCGCAGAGTTTTTGAATCAATGGGGTAATGAGTAA", - "dna_sequence_length": 246, - "functions": [ - "DUF2543 family protein" - ], - "id": "CDS_1280", - "location": [ - [ - "NC_000913", - 1357668, - "-", - 246 - ] - ], - "md5": "68af5be661fb5e7b685f4b8778a60247", - "parent_gene": "", - "protein_md5": "247eb2cf2ab89ef911db325da65c592b", - "protein_translation": "MNHDIPLKYFDIADEYATECAEPVAEAERTPLAHYFQLLLTRLMNNEEISEEAQHEMAAEAGINPVRIDEIAEFLNQWGNE", - "protein_translation_length": 81, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13907" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76037" - ], - [ - "gene_synonym", - "b1296" - ], - [ - "gene_synonym", - "GI:90111243" - ], - [ - "gene_synonym", - "JW1289" - ], - [ - "gene_synonym", - "NP_415812.4" - ], - [ - "gene_synonym", - "ECK1291" - ], - [ - "gene_synonym", - "ycjJ" - ], - [ - "gene_synonym", - "puuP" - ], - [ - "gene_synonym", - "ASAP:ABE-0004362" - ], - [ - "gene_synonym", - "GeneID:946287" - ] - ], - "dna_sequence": "ATGGCTATTAATTCACCACTGAATATTGCTGCGCAACCCGGCAAAACCCGTCTGCGAAAATCACTGAAATTGTGGCAGGTGGTGATGATGGGTCTGGCCTATCTCACGCCGATGACCGTATTTGATACTTTTGGTATTGTCTCCGGCATTAGCGACGGTCACGTTCCGGCGTCCTATTTGCTGGCGCTGGCGGGTGTGCTGTTTACCGCTATCAGCTACGGCAAACTGGTTCGCCAGTTTCCGGAGGCCGGTTCGGCCTATACCTACGCGCAAAAGTCGATTAACCCGCACGTCGGATTTATGGTCGGCTGGTCATCGCTGCTGGATTATCTCTTTTTGCCGATGATTAACGTCTTGTTGGCGAAAATCTATCTCTCCGCCCTCTTCCCGGAAGTGCCGCCGTGGGTGTGGGTGGTAACCTTCGTCGCCATTTTAACCGCCGCGAATCTGAAGAGCGTCAACCTGGTCGCTAACTTCAATACCCTGTTTGTACTGGTGCAAATCTCCATCATGGTGGTGTTTATCTTCCTGGTAGTTCAGGGACTGCATAAAGGAGAAGGCGTTGGCACCGTCTGGTCACTTCAGCCGTTTATCAGCGAGAACGCGCACCTGATCCCGATTATTACCGGGGCGACGATTGTCTGTTTCTCCTTCCTCGGTTTCGATGCGGTGACCACGCTTTCGGAAGAGACGCCGGACGCCGCACGCGTGATCCCGAAAGCCATCTTCCTGACGGCGGTCTACGGTGGCGTTATCTTTATCGCGGCGTCGTTCTTTATGCAGCTGTTCTTTCCCGATATCAGCCGCTTTAAAGATCCGGATGCCGCACTGCCTGAAATTGCGCTGTACGTCGGCGGCAAGCTCTTCCAGTCGATTTTCCTCTGCACCACGTTTGTGAACACGTTAGCCTCTGGCCTGGCTTCACATGCCAGCGTGTCGCGTCTGCTGTATGTGATGGGGCGTGACAATGTGTTTCCGGAGCGCGTGTTTGGCTATGTGCACCCAAAATGGCGGACTCCGGCACTCAACGTCATTATGGTCGGGATTGTCGCGTTGTCGGCGCTGTTCTTCGATTTAGTTACCGCCACAGCGTTAATTAACTTCGGTGCTCTGGTGGCGTTTACCTTCGTGAATCTGTCGGTGTTTAATCATTTCTGGCGGCGTAAAGGAATGAATAAAAGCTGGAAGGATCACTTCCACTATTTGCTGATGCCGCTGGTTGGCGCGCTGACGGTGGGTGTGCTGTGGGTTAACCTCGAGTCAACGTCACTGACACTCGGTCTGGTATGGGCTTCGTTAGGCGGCGCATATTTATGGTATCTGATCCGCCGCTATCGCAAAGTGCCGTTGTATGATGGTGACAGAACGCCGGTGAGTGAAACGTAA", - "dna_sequence_length": 1386, - "functions": [ - "putrescine importer" - ], - "id": "CDS_1281", - "location": [ - [ - "NC_000913", - 1359187, - "-", - 1386 - ] - ], - "md5": "f42f2565320896c5c526cdc79775c52b", - "parent_gene": "", - "protein_md5": "b04842eab7943bed53406effe5908606", - "protein_translation": "MAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTFGIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMVGWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSVNLVANFNTLFVLVQISIMVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSFLGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAALPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPERVFGYVHPKWRTPALNVIMVGIVALSALFFDLVTATALINFGALVAFTFVNLSVFNHFWRRKGMNKSWKDHFHYLLMPLVGALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKVPLYDGDRTPVSET", - "protein_translation_length": 461, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946202" - ], - [ - "gene_synonym", - "EcoGene:EG13908" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P78061" - ], - [ - "gene_synonym", - "b1297" - ], - [ - "gene_synonym", - "puuA" - ], - [ - "gene_synonym", - "GI:90111244" - ], - [ - "gene_synonym", - "ASAP:ABE-0004365" - ], - [ - "gene_synonym", - "NP_415813.4" - ], - [ - "gene_synonym", - "ECK1292" - ], - [ - "gene_synonym", - "ycjK" - ], - [ - "gene_synonym", - "JW5201" - ] - ], - "dna_sequence": "ATGGAAACCAATATCGTTGAAGTAGAGAACTTTGTTCAGCAGTCAGAAGAGAGGCGGGGTAGCGCCTTTACGCAGGAAGTGAAACGCTACCTGGAGCGCTACCCGAATACGCAATATGTTGATGTTTTACTTACCGATTTAAATGGTTGCTTCCGTGGAAAGCGTATTCCTGTTTCAAGCCTGAAGAAGCTCGAGAAAGGGTGTTATTTCCCGGCCTCGGTATTTGCAATGGATATTCTGGGCAACGTAGTAGAAGAAGCAGGTCTGGGTCAGGAAATGGGCGAGCCGGATCGTACCTGTGTTCCTGTTCTCGGTTCCTTAACTCCTTCTGCCGCCGATCCAGAGTTTATCGGTCAGATGCTCCTGACCATGGTCGATGAAGATGGCGCTCCCTTTGACGTTGAGCCGCGGAACGTTCTTAACCGCCTGTGGCAGCAGCTGCGCCAGCGCGGATTGTTCCCGGTCGTAGCGGTAGAGCTGGAGTTCTATTTACTGGATCGCCAGCGCGACGCTGAAGGGTATCTGCAACCGCCCTGCGCGCCTGGCACCGATGACCGCAATACACAAAGCCAGGTTTACTCCGTTGATAACCTCAACCACTTCGCCGACGTGCTCAATGATATTGATGAACTGGCGCAGTTACAGCTGATTCCGGCAGATGGCGCGGTCGCTGAGGCCTCGCCGGGTCAGTTTGAAATCAACCTTTACCATACTGATAACGTGCTGGAAGCCTGCGATGATGCGCTGGCACTAAAACGCCTGGTGCGTCTGATGGCAGAAAAGCATAAGATGCACGCCACTTTTATGGCGAAGCCGTATGAAGAGCACGCGGGCAGCGGAATGCATATCCATATCAGTATGCAAAATAATCGTGGCGAGAACGTGCTTTCTGACGCGGAAGGCGAAGATTCGCCGCTGCTGAAAAAGATGCTCGCCGGGATGATTGACCTGATGCCGTCGTCGATGGCGTTGCTGGCACCAAACGTGAACTCGTATCGCCGCTTCCAGCCGGGAATGTATGTGCCGACGCAGGCGTCGTGGGGCCATAACAACCGCACCGTCGCCCTGCGTATTCCGTGCGGCGACCGTCATAATCACCGCGTGGAATATCGCGTGGCGGGTGCCGATGCCAACCCATATCTGGTGATGGCAGCGATTTTTGCCGGTATTTTGCATGGCCTTGATAACGAGCTGCCGTTGCAGGAAGAAGTCGAAGGCAACGGGCTGGAACAGGAAGGCTTACCCTTTCCGATTCGCCAGAGCGATGCCCTGGGTGAGTTTATCGAGAATGATCACCTGCGCCGCTATTTAGGCGAACGCTTCTGCCATGTCTATCACGCCTGTAAAAATGATGAGCTGTTGCAGTTTGAGCGCCTCATCACAGAAACAGAAATTGAGTGGATGTTGAAAAACGCGTAA", - "dna_sequence_length": 1419, - "functions": [ - "glutamate--putrescine ligase" - ], - "id": "CDS_1282", - "location": [ - [ - "NC_000913", - 1360908, - "-", - 1419 - ] - ], - "md5": "2e28618bee4bb4db097b94c84b8d6e3c", - "parent_gene": "", - "protein_md5": "2260ff998867594ff6b17496c0063a0c", - "protein_translation": "METNIVEVENFVQQSEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVELEFYLLDRQRDAEGYLQPPCAPGTDDRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDNVLEACDDALALKRLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDAEGEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA", - "protein_translation_length": 472, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1291" - ], - [ - "gene_synonym", - "NP_415814.4" - ], - [ - "gene_synonym", - "EcoGene:EG13909" - ], - [ - "gene_synonym", - "b1298" - ], - [ - "gene_synonym", - "GI:90111245" - ], - [ - "gene_synonym", - "puuD" - ], - [ - "gene_synonym", - "ECK1293" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76038" - ], - [ - "gene_synonym", - "ASAP:ABE-0004369" - ], - [ - "gene_synonym", - "ycjL" - ], - [ - "gene_synonym", - "GeneID:945882" - ] - ], - "dna_sequence": "ATGGAAAATATAATGAACAATCCGGTTATCGGTGTCGTAATGTGCAGGAACAGGCTTAAGGGTCATGCGACCCAGACTCTGCAAGAAAAGTACCTGAATGCCATCATCCATGCAGGCGGCTTGCCTATTGCGCTACCACATGCGCTGGCGGAACCGTCATTACTTGAACAACTTTTGCCGAAACTCGATGGCATTTATCTTCCTGGTAGTCCCAGCAATGTGCAGCCGCACCTATATGGTGAAAACGGCGATGAGCCTGACGCCGATCCCGGGCGTGATCTTCTGAGCATGGCGATAATTAATGCCGCACTCGAAAGGCGCATCCCCATTTTCGCCATCTGCCGGGGTTTACAAGAACTGGTGGTGGCAACCGGTGGTTCGTTGCATCGCAAGCTGTGCGAACAGCCTGAATTGCTGGAACATCGGGAAGATCCCGAACTGCCGGTGGAACAGCAATATGCACCGTCGCATGAAGTTCAGGTTGAAGAGGGGGGATTACTGTCTGCGTTGTTACCTGAATGTAGCAACTTTTGGGTAAACTCTCTACATGGACAAGGGGCGAAGGTCGTTAGCCCACGGTTGCGTGTTGAAGCTCGCTCGCCGGATGGCTTAGTTGAGGCGGTTAGCGTCATCAATCATCCTTTTGCGCTGGGCGTACAGTGGCACCCGGAATGGAACAGTAGCGAGTACGCGCTTTCGCGTATATTGTTCGAGGGCTTTATCACCGCTTGTCAGCACCATATCGCTGAAAAACAGCGACTCTGA", - "dna_sequence_length": 765, - "functions": [ - "gamma-glutamyl-gamma-aminobutyrate hydrolase" - ], - "id": "CDS_1283", - "location": [ - [ - "NC_000913", - 1361120, - "+", - 765 - ] - ], - "md5": "9860181773421941e7a626cb840d3b5f", - "parent_gene": "", - "protein_md5": "5f832b8e4ebdda24789362e2b7af8314", - "protein_translation": "MENIMNNPVIGVVMCRNRLKGHATQTLQEKYLNAIIHAGGLPIALPHALAEPSLLEQLLPKLDGIYLPGSPSNVQPHLYGENGDEPDADPGRDLLSMAIINAALERRIPIFAICRGLQELVVATGGSLHRKLCEQPELLEHREDPELPVEQQYAPSHEVQVEEGGLLSALLPECSNFWVNSLHGQGAKVVSPRLRVEARSPDGLVEAVSVINHPFALGVQWHPEWNSSEYALSRILFEGFITACQHHIAEKQRL", - "protein_translation_length": 254, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415815.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9U6" - ], - [ - "gene_synonym", - "JW1292" - ], - [ - "gene_synonym", - "GeneID:945886" - ], - [ - "gene_synonym", - "b1299" - ], - [ - "gene_synonym", - "GI:16129260" - ], - [ - "gene_synonym", - "ycjC" - ], - [ - "gene_synonym", - "ECK1294" - ], - [ - "gene_synonym", - "ASAP:ABE-0004371" - ], - [ - "gene_synonym", - "EcoGene:EG12431" - ], - [ - "gene_synonym", - "puuR" - ] - ], - "dna_sequence": "ATGAGTGATGAGGGACTGGCGCCAGGAAAACGCTTGTCGGAAATCCGCCAGCAGCAGGGGCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGTACGCTGCAAAAGCTGCTGAAGGTGTATGGTCTGTCACTCTCGGAATTCTTTTCCGAGCCGGAAAAACCTGATGAGCCGCAGGTCGTCATTAATCAGGACGACTTAATTGAGATGGGTAGTCAGGGTGTGTCAATGAAGCTGGTTCATAACGGTAACCCGAATCGCACGCTGGCGATGATCTTTGAAACGTACCAGCCGGGCACAACCACTGGGGAAAGAATTAAGCATCAGGGTGAGGAAATAGGCACTGTACTGGAAGGTGAAATTGTTCTGACGATTAATGGTCAGGATTACCACCTCGTCGCGGGGCAAAGTTATGCCATTAATACCGGCATCCCGCACAGTTTCAGTAATACGTCGGCAGGTATTTGCCGAATTATCAGCGCCCATACGCCCACCACGTTTTAA", - "dna_sequence_length": 558, - "functions": [ - "repressor for the divergent puu operons, putrescine inducible" - ], - "id": "CDS_1284", - "location": [ - [ - "NC_000913", - 1361911, - "+", - 558 - ] - ], - "md5": "ce143c9add3cd5f7f18b2c8a6f550672", - "parent_gene": "", - "protein_md5": "80f9398ec78d7f51d888303374d3524f", - "protein_translation": "MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF", - "protein_translation_length": 185, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1293" - ], - [ - "gene_synonym", - "b1300" - ], - [ - "gene_synonym", - "EcoGene:EG10036" - ], - [ - "gene_synonym", - "puuC" - ], - [ - "gene_synonym", - "GeneID:947003" - ], - [ - "gene_synonym", - "GI:16129261" - ], - [ - "gene_synonym", - "ECK1295" - ], - [ - "gene_synonym", - "ASAP:ABE-0004376" - ], - [ - "gene_synonym", - "NP_415816.1" - ], - [ - "gene_synonym", - "aldH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23883" - ] - ], - "dna_sequence": "ATGAATTTTCATCATCTGGCTTACTGGCAGGATAAAGCGTTAAGTCTCGCCATTGAAAACCGCTTATTTATTAACGGTGAATATACTGCTGCGGCGGAAAATGAAACCTTTGAAACCGTTGATCCGGTCACCCAGGCACCGCTGGCGAAAATTGCCCGCGGCAAGAGCGTCGATATCGACCGTGCGATGAGCGCAGCACGCGGCGTATTTGAACGCGGCGACTGGTCACTCTCTTCTCCGGCTAAACGTAAAGCGGTACTGAATAAACTCGCCGATTTAATGGAAGCCCACGCCGAAGAGCTGGCACTGCTGGAAACTCTCGACACCGGCAAACCGATTCGTCACAGTCTGCGTGATGATATTCCCGGCGCGGCGCGCGCCATTCGCTGGTACGCCGAAGCGATCGACAAAGTGTATGGCGAAGTGGCGACCACCAGTAGCCATGAGCTGGCGATGATCGTGCGTGAACCGGTCGGCGTGATTGCCGCCATCGTGCCGTGGAACTTCCCGCTGTTGCTGACTTGCTGGAAACTCGGCCCGGCGCTGGCGGCGGGAAACAGCGTGATTCTAAAACCGTCTGAAAAATCACCGCTCAGTGCGATTCGTCTCGCGGGGCTGGCGAAAGAAGCAGGCTTGCCGGATGGTGTGTTGAACGTGGTGACGGGTTTTGGTCATGAAGCCGGGCAGGCGCTGTCGCGTCATAACGATATCGACGCCATTGCCTTTACCGGTTCAACCCGTACCGGGAAACAGCTGCTGAAAGATGCGGGCGACAGCAACATGAAACGCGTCTGGCTGGAAGCGGGCGGCAAAAGCGCCAACATCGTTTTCGCTGACTGCCCGGATTTGCAACAGGCGGCAAGCGCCACCGCAGCAGGCATTTTCTACAACCAGGGACAGGTGTGCATCGCCGGAACGCGCCTGTTGCTGGAAGAGAGCATCGCCGATGAATTCTTAGCCCTGTTAAAACAGCAGGCGCAAAACTGGCAGCCGGGCCATCCACTTGATCCCGCAACCACCATGGGCACCTTAATCGACTGCGCCCACGCCGACTCGGTCCATAGCTTTATTCGGGAAGGCGAAAGCAAAGGGCAACTGTTGTTGGATGGCCGTAACGCCGGGCTGGCTGCCGCCATCGGCCCGACCATCTTTGTGGATGTGGACCCGAATGCGTCCTTAAGTCGCGAAGAGATTTTCGGTCCGGTGCTGGTGGTCACGCGTTTCACATCAGAAGAACAGGCGCTACAGCTTGCCAACGACAGCCAGTACGGCCTTGGCGCGGCGGTATGGACGCGCGACCTCTCCCGCGCGCACCGCATGAGCCGACGCCTGAAAGCCGGTTCCGTCTTCGTCAATAACTACAACGACGGCGATATGACCGTGCCGTTTGGCGGCTATAAGCAGAGCGGCAACGGTCGCGACAAATCCCTGCATGCCCTTGAAAAATTCACTGAACTGAAAACCATCTGGATAAGCCTGGAGGCCTGA", 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[ - "gene_synonym", - "ordL" - ], - [ - "gene_synonym", - "GeneID:945072" - ], - [ - "gene_synonym", - "JW1294" - ], - [ - "gene_synonym", - "puuB" - ], - [ - "gene_synonym", - "NP_415817.1" - ], - [ - "gene_synonym", - "GI:16129262" - ], - [ - "gene_synonym", - "ECK1296" - ], - [ - "gene_synonym", - "ycjA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37906" - ], - [ - "gene_synonym", - "EcoGene:EG11822" - ], - [ - "gene_synonym", - "ASAP:ABE-0004378" - ] - ], - "dna_sequence": "ATGACCGAACATACCAGCAGTTACTACGCCGCCAGTGCGAATAAATATGCACCATTCGACACGCTGAATGAGTCAATCACCTGCGACGTTTGCGTGGTTGGCGGCGGCTATACCGGGCTCTCCTCCGCGCTGCATCTGGCGGAAGCGGGCTTTGACGTAGTGGTTCTCGAAGCCTCACGCATCGGCTTTGGCGCAAGCGGGCGCAATGGCGGACAGCTTGTGAACTCCTACAGCCGCGACATCGACGTGATCGAAAAAAGCTACGGCATGGACACCGCCCGTATGCTCGGCAGCATGATGTTCGAAGGTGGTGAGATCATCCGCGAACGTATCAAACGTTATCAGATTGACTGCGACTACCGCCCCGGCGGCCTGTTTGTGGCGATGAATGATAAACAGCTCGCCACACTTGAAGAGCAGAAAGAGAACTGGGAACGCTACGGCAATAAACAGCTGGAATTGCTGGACGCCAACGCCATTCGCCGTGAAGTAGCCAGCGATCGCTATACCGGTGCGCTGCTGGATCACAGCGGTGGGCATATTCATCCGCTAAACCTTGCCATTGGCGAAGCGGACGCCATCCGCCTCAACGGCGGGCGCGTGTATGAACTTTCTGCCGTGACGCAGATCCAGCACACCACGCCAGCCGTTGTGCGAACTGCCAAAGGTCAGGTGACGGCGAAGTATGTGATTGTCGCCGGGAATGCGTATCTGGGCGATAAAGTAGAGCCGGAACTGGCGAAACGCAGCATGCCGTGCGGCACGCAGGTGATCACCACCGAACGGCTGTCGGAAGATTTAGCCCGTTCGCTGATCCCGAAAAACTACTGTGTGGAAGACTGTAACTATCTGCTTGATTACTACCGTCTTACCGCCGACAACCGCCTGCTGTACGGCGGCGGCGTGGTCTACGGCGCGCGCGACCCGGATGACGTTGAGCGCCTTGTGGTGCCGAAACTGCTGAAAACCTTCCCGCAGCTGAAGGGCGTGAAAATTGATTACCGCTGGACGGGCAACTTCCTGCTGACCCTGTCGCGTATGCCGCAGTTTGGTCGCCTCGATACCAACATCTATTACATGCAGGGCTACAGCGGCCACGGCGTGACCTGTACTCATCTAGCCGGACGTTTGATTGCCGAACTGCTGCGCGGCGACGCCGAACGTTTCGATGCCTTCGCCAATCTGCCGCATTACCCGTTCCCCGGCGGGCGCACGCTGCGTGTGCCGTTTACCGCGATGGGCGCGGCGTATTACAGCCTGCGCGATCGTCTGGGCGTTTAA", 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], - [ - "gene_synonym", - "GI:16129263" - ], - [ - "gene_synonym", - "goaG" - ], - [ - "gene_synonym", - "puuE" - ], - [ - "gene_synonym", - "NP_415818.1" - ], - [ - "gene_synonym", - "ECK1297" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P50457" - ], - [ - "gene_synonym", - "ASAP:ABE-0004380" - ] - ], - "dna_sequence": "ATGAGCAACAATGAATTCCATCAGCGTCGTCTTTCTGCCACTCCGCGCGGGGTTGGCGTGATGTGTAACTTCTTCGCCCAGTCGGCTGAAAACGCCACGCTGAAGGATGTTGAGGGCAACGAGTACATCGATTTCGCCGCAGGCATTGCGGTGCTGAATACCGGACATCGCCACCCTGATCTGGTCGCGGCGGTGGAGCAGCAACTGCAACAGTTTACCCACACCGCGTATCAGATTGTGCCGTATGAAAGCTACGTCACCCTGGCGGAGAAAATCAACGCCCTTGCCCCGGTGAGCGGGCAGGCCAAAACCGCGTTCTTCACCACCGGTGCGGAAGCGGTGGAAAACGCGGTGAAAATTGCTCGCGCCCATACCGGACGCCCTGGCGTGATTGCGTTTAGCGGCGGCTTTCACGGTCGTACGTATATGACCATGGCGCTGACCGGAAAAGTTGCGCCGTACAAAATCGGCTTCGGCCCGTTCCCTGGTTCGGTGTATCACGTACCTTATCCGTCAGATTTACACGGCATTTCAACACAGGACTCCCTCGACGCCATCGAACGCTTGTTTAAATCAGACATCGAAGCGAAGCAGGTGGCGGCGATTATTTTCGAACCGGTGCAGGGCGAGGGCGGTTTCAACGTTGCGCCAAAAGAGCTGGTTGCCGCTATTCGCCGCCTGTGCGACGAGCACGGTATTGTGATGATTGCTGATGAAGTGCAAAGCGGCTTTGCGCGTACCGGTAAGCTGTTTGCCATGGATCATTACGCCGATAAGCCGGATTTAATGACGATGGCGAAAAGCCTCGCGGGCGGGATGCCGCTTTCGGGCGTGGTCGGTAACGCGAATATTATGGACGCACCCGCGCCGGGCGGGCTTGGCGGCACCTACGCCGGTAACCCGCTGGCGGTGGCTGCCGCGCACGCGGTGCTCAACATTATCGACAAAGAATCACTCTGCGAACGCGCGAATCAACTGGGCCAGCGTCTCAAAAACACGTTGATTGATGCCAAAGAAAGCGTTCCGGCCATTGCTGCGGTACGCGGCCTGGGGTCGATGATTGCGGTAGAGTTTAACGATCCGCAAACGGGCGAGCCGTCAGCGGCGATTGCACAGAAAATCCAGCAACGCGCGCTGGCGCAGGGGCTGCTCCTGCTGACCTGTGGCGCATACGGCAACGTGATTCGCTTCCTGTATCCGCTGACCATCCCGGATGCGCAATTCGATGCGGCAATGAAAATTTTGCAGGATGCGCTGAGCGATTAA", - "dna_sequence_length": 1266, - "functions": [ - "4-aminobutyrate aminotransferase, PLP-dependent" - ], - "id": "CDS_1287", - "location": [ - [ - "NC_000913", - 1365550, - "+", - 1266 - ] - ], - "md5": "231e75743cf2707e3ea6479bb8105078", - "parent_gene": "", - "protein_md5": "e5db5e4d81efa1127717b7285c13d6b5", - "protein_translation": "MSNNEFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAVEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALSD", - "protein_translation_length": 421, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1303" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37344" - ], - [ - "gene_synonym", - "JW1296" - ], - [ - "gene_synonym", - "pspF" - ], - [ - "gene_synonym", - "GeneID:945683" - ], - [ - "gene_synonym", - "GI:90111246" - ], - [ - "gene_synonym", - "ycjB" - ], - [ - "gene_synonym", - "ASAP:ABE-0004383" - ], - [ - "gene_synonym", - "EcoGene:EG12344" - ], - [ - "gene_synonym", - "NP_415819.4" - ], - [ - "gene_synonym", - "ECK1298" - ] - ], - "dna_sequence": "ATGGCAGAATACAAAGATAATTTACTTGGTGAGGCGAACAGCTTTCTCGAAGTGCTGGAACAGGTTTCGCATCTCGCACCGCTGGACAAACCGGTGCTCATCATCGGCGAACGCGGCACCGGTAAAGAGCTGATTGCCAGCCGCCTGCATTATCTCTCCTCCCGTTGGCAAGGGCCGTTTATTTCCCTTAACTGCGCGGCGTTAAATGAAAATCTGCTGGATTCCGAACTGTTTGGTCACGAAGCGGGGGCGTTTACCGGTGCGCAAAAACGTCATCCAGGGAGATTTGAACGTGCCGACGGCGGTACGCTATTTCTTGATGAACTCGCTACGGCACCGATGATGGTGCAGGAGAAATTATTGCGCGTGATTGAGTACGGTGAACTGGAGCGCGTTGGCGGCAGCCAACCATTGCAGGTGAATGTGCGGTTGGTATGCGCGACGAATGCCGATCTCCCGGCGATGGTCAATGAAGGCACTTTTCGCGCTGACCTGCTCGACCGACTGGCTTTTGATGTTGTACAACTGCCACCACTGCGCGAGCGCGAAAGCGACATAATGTTGATGGCAGAATACTTTGCCATCCAGATGTGTCGGGAAATCAAGCTGCCTCTGTTCCCGGGGTTTACGGAGCGCGCCAGAGAAACATTGCTGAATTATCGTTGGCCGGGAAATATTCGTGAATTGAAAAACGTGGTGGAACGTTCAGTGTATCGCCACGGCACCAGCGATTATCCGCTTGATGACATCATTATTGATCCCTTTAAACGGCGTCCGCCTGAAGACGCTATCGCCGTTTCAGAAACCACCTCGCTTCCAACACTGCCGCTGGATTTACGTGAGTTTCAGATGCAGCAGGAAAAAGAGTTGCTGCAACTCAGTTTGCAACAAGGGAAATATAACCAGAAGCGCGCGGCTGAATTACTGGGGTTAACTTATCATCAGTTCCGCGCGTTGTTGAAAAAGCACCAGATTTAG", - "dna_sequence_length": 978, - "functions": [ - "psp operon transcriptional activator" - ], - "id": "CDS_1288", - "location": [ - [ - "NC_000913", - 1367912, - "-", - 978 - ] - ], - "md5": "1e283caae146ce1dc9035c40ea8b64cf", - "parent_gene": "", - "protein_md5": "1b9e56cbcef41086039e5b0acfff5edc", - "protein_translation": "MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPAMVNEGTFRADLLDRLAFDVVQLPPLRERESDIMLMAEYFAIQMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRHGTSDYPLDDIIIDPFKRRPPEDAIAVSETTSLPTLPLDLREFQMQQEKELLQLSLQQGKYNQKRAAELLGLTYHQFRALLKKHQI", - "protein_translation_length": 325, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945887" - ], - [ - "gene_synonym", - "EcoGene:EG10776" - ], - [ - "gene_synonym", - "JW1297" - ], - [ - "gene_synonym", - "b1304" - ], - [ - "gene_synonym", - "GI:16129265" - ], - [ - "gene_synonym", - "NP_415820.1" - ], - [ - "gene_synonym", - "pspA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFM6" - ], - [ - "gene_synonym", - "cog" - ], - [ - "gene_synonym", - "ASAP:ABE-0004387" - ], - [ - "gene_synonym", - "ECK1299" - ] - ], - "dna_sequence": "ATGGGTATTTTTTCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCGGCGCGTGAGGTTGAATGGCAGGAAAAAGCCGAACTGGCGCTGCTGAAAGAGAGAGAGGATCTGGCACGTGCAGCGTTAATTGAAAAACAGAAACTGACCGATCTGATTAAGTCCCTGGAACATGAAGTGACGCTGGTGGACGATACGCTGGCACGCATGAAGAAAGAGATTGGCGAGCTGGAAAACAAATTGAGCGAAACACGCGCTCGCCAGCAGGCATTGATGTTACGTCATCAGGCGGCAAACTCGTCGCGCGATGTGCGTCGTCAGCTGGACAGTGGCAAACTGGATGAAGCAATGGCTCGTTTCGAATCTTTCGAACGTCGTATTGACCAGATGGAAGCGGAAGCAGAAAGCCACAGCTTCGGTAAACAAAAATCGCTGGACGATCAGTTTGCCGAACTGAAAGCCGATGATGCAATCAGCGAACAACTGGCACAATTAAAAGCCAAAATGAAGCAAGACAATCAATAA", - "dna_sequence_length": 669, - "functions": [ - "regulatory protein for phage-shock-protein 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"dna_sequence": "ATGAGCGCGCTATTTCTGGCTATTCCGTTAACCATTTTTGTGCTGTTTGTTTTACCGATCTGGTTATGGCTGCATTACAGCAATCGTTCTGGTCGCAGTGAATTGTCGCAAAGTGAGCAGCAGCGATTAGCGCAACTGGCTGATGAAGCAAAACGGATGCGCGAACGTATTCAGGCGCTGGAATCTATTCTTGATGCAGAACATCCGAACTGGAGGGATCGCTAA", - "dna_sequence_length": 225, - "functions": [ - "psp operon transcription co-activator" - ], - "id": "CDS_1290", - "location": [ - [ - "NC_000913", - 1368801, - "+", - 225 - ] - ], - "md5": "a19155081682de9a752396d99234a82c", - "parent_gene": "", - "protein_md5": "e9921b39277c0b42ae747f7a86edb6b4", - "protein_translation": "MSALFLAIPLTIFVLFVLPIWLWLHYSNRSGRSELSQSEQQRLAQLADEAKRMRERIQALESILDAEHPNWRDR", - "protein_translation_length": 74, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFN2" - ], - [ - "gene_synonym", - "b1306" - ], - [ - "gene_synonym", - "JW1299" - ], - [ - "gene_synonym", - "GI:16129267" - ], - [ - "gene_synonym", - "EcoGene:EG10778" - ], - [ - "gene_synonym", - "pspC" - ], - [ - "gene_synonym", - "GeneID:945499" - ], - [ - "gene_synonym", - "ASAP:ABE-0004391" - ], - [ - "gene_synonym", - "ECK1301" - ], - [ - "gene_synonym", - "NP_415822.1" - ] - ], - "dna_sequence": "ATGGCGGGCATTAATCTCAATAAAAAATTATGGCGTATTCCACAGCAGGGCATGGTCCGCGGCGTCTGCGCCGGGATTGCCAACTATTTTGATGTACCGGTAAAACTGGTGCGTATCCTGGTGGTGCTGTCGATTTTCTTCGGTCTGGCGCTGTTTACCCTGGTTGCTTACATCATTTTGTCATTTGCGCTTGATCCAATGCCGGACAACATGGCCTTTGGTGAGCAGCTACCTTCCAGCAGCGAATTGCTGGATGAAGTCGACCGTGAACTGGCGGCAAGTGAAACGCGTTTACGCGAGATGGAACGTTATGTCACTTCCGATACTTTCACGTTACGTAGCCGTTTCCGTCAACTGTGA", - "dna_sequence_length": 360, - "functions": [ - "psp operon transcription co-activator" - ], - "id": "CDS_1291", - "location": [ - [ - "NC_000913", - 1369025, - "+", - 360 - ] - ], - "md5": "f55f0157010ce203cf685afdff7252cd", - "parent_gene": "", - "protein_md5": "f54267821097bf2da5d53969cd3631b0", - "protein_translation": "MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLSIFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREMERYVTSDTFTLRSRFRQL", - "protein_translation_length": 119, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10779" - ], - [ - "gene_synonym", - "b1307" - ], - [ - "gene_synonym", - "GI:16129268" - ], - [ - "gene_synonym", - "pspD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFV8" - ], - [ - "gene_synonym", - "NP_415823.1" - ], - [ - "gene_synonym", - "JW1300" - ], - [ - "gene_synonym", - "ECK1302" - ], - [ - "gene_synonym", - "ASAP:ABE-0004394" - ], - [ - "gene_synonym", - "GeneID:945635" - ] - ], - "dna_sequence": "ATGAATACTCGCTGGCAACAGGCCGGGCAAAAGGTAAAGCCTGGTTTCAAATTAGCAGGCAAGCTGGTACTTCTTACCGCACTGCGCTATGGCCCGGCGGGTGTGGCGGGCTGGGCGATAAAATCAGTTGCTCGCCGACCGCTGAAAATGTTGCTGGCTGTGGCGCTGGAACCGCTGTTAAGTCGGGCTGCTAATAAACTGGCACAGCGTTATAAAAGGTGA", - "dna_sequence_length": 222, - "functions": [ - "peripheral inner membrane phage-shock protein" - ], - "id": "CDS_1292", - "location": [ - [ - "NC_000913", - 1369393, - "+", - 222 - ] - ], - "md5": "b04b51e4bad1c48e50f4797765433b26", - "parent_gene": "", - "protein_md5": "9b875f158a8efa9d47cded8a23df00bd", - "protein_translation": "MNTRWQQAGQKVKPGFKLAGKLVLLTALRYGPAGVAGWAIKSVARRPLKMLLAVALEPLLSRAANKLAQRYKR", - "protein_translation_length": 73, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129269" - ], - [ - "gene_synonym", - "NP_415824.1" - ], - [ - "gene_synonym", - "pspE" - ], - [ - "gene_synonym", - "b1308" - ], - [ - "gene_synonym", - "GeneID:945652" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23857" - ], - [ - "gene_synonym", - "EcoGene:EG10780" - ], - [ - "gene_synonym", - "JW1301" - ], - [ - "gene_synonym", - "ECK1303" - ], - [ - "gene_synonym", - "ASAP:ABE-0004397" - ] - ], - "dna_sequence": "ATGTTTAAAAAAGGCTTACTTGCTCTGGCACTGGTGTTTTCACTGCCCGTTTTCGCCGCTGAACACTGGATCGATGTTCGTGTTCCAGAGCAGTATCAGCAAGAGCACGTTCAGGGGGCCATCAATATTCCCCTGAAGGAAGTGAAAGAGCGCATTGCCACCGCCGTTCCGGATAAAAACGACACCGTGAAAGTGTATTGCAATGCCGGACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAA", - "dna_sequence_length": 315, - "functions": [ - "thiosulfate:cyanide sulfurtransferase (rhodanese)" - ], - "id": "CDS_1293", - "location": [ - [ - "NC_000913", - 1369689, - "+", - 315 - ] - ], - "md5": "03364d1eb1d84b75f5483abaabb30440", - "parent_gene": "", - "protein_md5": "18dca3e93ec28bfdee59bd227ada733e", - "protein_translation": "MFKKGLLALALVFSLPVFAAEHWIDVRVPEQYQQEHVQGAINIPLKEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKDIAMPKVKG", - "protein_translation_length": 104, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76041" - ], - [ - "gene_synonym", - "NP_415825.4" - ], - [ - "gene_synonym", - "b1309" - ], - [ - "gene_synonym", - "GeneID:945659" - ], - [ - "gene_synonym", - "ASAP:ABE-0004400" - ], - [ - "gene_synonym", - "GI:90111247" - ], - [ - "gene_synonym", - "EcoGene:EG13910" - ], - [ - "gene_synonym", - "JW1302" - ], - [ - "gene_synonym", - "ECK1304" - ], - [ - "gene_synonym", - "ycjM" - ] - ], - "dna_sequence": "ATGAAACAGAAAATTACGGATTACCTGGACGAAATCTACGGTGGAACATTTACCGCAACTCATTTACAGAAACTTGTAACGCGTCTTGAGAGTGCGAAACGATTAATTACACAGCGACGTAAAAAACACTGGGATGAAAGTGATGTCGTGTTAATTACCTATGCCGATCAATTTCACAGCAATGATTTAAAACCATTACCCACATTTAATCAGTTTTACCATCAATGGCTGCAAAGCATTTTTTCACATGTTCATTTGTTGCCGTTTTATCCATGGTCATCTGATGATGGCTTTTCGGTAATTGATTATCATCAGGTCGCCAGTGAAGCGGGGGAGTGGCAGGATATTCAGCAACTCGGTGAATGCAGTCATTTAATGTTTGATTTTGTCTGCAACCATATGTCGGCAAAAAGTGAATGGTTTAAAAACTATTTACAACAGCATCCAGGTTTTGAAGATTTTTTTATTGCCGTTGACCCGCAAACCGATCTCAGCGCCGTCACTCGCCCGCGTGCGTTACCGTTATTAACGCCATTCCAGATGCGCGATCATTCAACGCGCCATTTATGGACCACCTTTAGTGACGATCAAATTGACCTGAATTACCGTAGCCCTGAAGTGTTGCTGGCGATGGTGGATGTTTTACTCTGTTACCTTGCGAAAGGTGCTGAGTATGTCCGCCTGGATGCCGTTGGCTTTATGTGGAAAGAGCCGGGAACAAGCTGCATCCATCTGGAAAAAACACATCTGATTATCAAACTGTTACGGTCGATTATTGATAACGTTGCGCCAGGTACAGTGATCATTACCGAGACCAATGTTCCGCATAAAGACAACATTGCTTACTTTGGCGCAGGCGATGACGAAGCACATATGGTGTACCAGTTCTCGCTGCCGCCACTGGTGCTGCATGCGGTGCAAAAACAGAACGTTGAGGCGCTTTGTGCGTGGGCGCAAAACCTGACACTACCTTCCAGCAACACCACCTGGTTTAACTTCCTCGCCTCTCACGATGGCATCGGGCTAAACCCGCTACGGGGCTTGTTGCCTGAAAGCGAAATATTAGAGCTGGTCGAGGCGTTACAGCAGGAAGGTGCATTAGTAAACTGGAAAAATAATCCCGACGGTACACGCAGTCCGTATGAAATAAATGTGACCTATATGGATGCGTTAAGCCGCCGTGAGAGTAGCGATGAAGAACGTTGCGCCAGGTTTATCCTTGCCCATGCGATTTTGTTAAGTTTCCCCGGTGTGCCAGCGATATATATTCAAAGTATTCTTGGCTCGCGTAATGATTACGCAGGTGTCGAAAAACTCGGATATAACCGTGCGATTAACCGTAAAAAATATCACAGTAAAGAGATAACCCGAGAACTGAACGATGAAGCTACATTAAGGCATGCGGTATATCATGAGTTGTCGCGTTTAATTACACTTCGTCGCAGCCATAACGAGTTTCATCCGGATAATAATTTTACCATTGATACGATTAATTCATCCGTAATGCGTATTCCAAGAAGTAACGCTGATGGTAATTGTCTGACTGGATTGTTTAATGTCAGTAAAAATATTCAGCATGTAAATATTACTAATCTGCATGGTCGGGATCTGATTAGTGAAGTTGATATATTGGGTAATGAAATAACGCTGCGCCCCTGGCAGGTTATGTGGATTAAATAA", - "dna_sequence_length": 1680, - "functions": [ - "alpha amylase catalytic domain family protein" - ], - "id": "CDS_1294", - "location": [ - [ - "NC_000913", - 1370216, - "+", - 1680 - ] - ], - "md5": "8e7038e47048dea52f469c832f8cb00e", - "parent_gene": "", - "protein_md5": "b48c5a582763fa1ba763524c9601cc91", - "protein_translation": "MKQKITDYLDEIYGGTFTATHLQKLVTRLESAKRLITQRRKKHWDESDVVLITYADQFHSNDLKPLPTFNQFYHQWLQSIFSHVHLLPFYPWSSDDGFSVIDYHQVASEAGEWQDIQQLGECSHLMFDFVCNHMSAKSEWFKNYLQQHPGFEDFFIAVDPQTDLSAVTRPRALPLLTPFQMRDHSTRHLWTTFSDDQIDLNYRSPEVLLAMVDVLLCYLAKGAEYVRLDAVGFMWKEPGTSCIHLEKTHLIIKLLRSIIDNVAPGTVIITETNVPHKDNIAYFGAGDDEAHMVYQFSLPPLVLHAVQKQNVEALCAWAQNLTLPSSNTTWFNFLASHDGIGLNPLRGLLPESEILELVEALQQEGALVNWKNNPDGTRSPYEINVTYMDALSRRESSDEERCARFILAHAILLSFPGVPAIYIQSILGSRNDYAGVEKLGYNRAINRKKYHSKEITRELNDEATLRHAVYHELSRLITLRRSHNEFHPDNNFTIDTINSSVMRIPRSNADGNCLTGLFNVSKNIQHVNITNLHGRDLISEVDILGNEITLRPWQVMWIK", - "protein_translation_length": 559, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129271" - ], - [ - "gene_synonym", - "GeneID:945696" - ], - [ - "gene_synonym", - "b1310" - ], - [ - "gene_synonym", - "ASAP:ABE-0004402" - ], - [ - "gene_synonym", - "JW1303" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76042" - ], - [ - "gene_synonym", - "EcoGene:EG13911" - ], - [ - "gene_synonym", - "NP_415826.1" - ], - [ - "gene_synonym", - "ycjN" - ], - [ - "gene_synonym", - "ECK1305" - ] - ], - "dna_sequence": "ATGATTAAATCAAAAATCGTGCTGTTATCAGCACTGGTTTCATGCGCCCTGATTTCAGGCTGTAAAGAAGAAAATAAAACGAATGTATCCATCGAATTTATGCATTCTTCGGTGGAGCAGGAGCGCCAGGCCGTTATCAGTAAATTGATTGCCCGTTTTGAAAAAGAAAACCCTGGCATCACCGTTAAGCAAGTGCCCGTGGAAGAAGATGCCTATAACACTAAAGTCATTACTCTTTCACGTAGCGGTTCGCTGCCGGAAGTGATCGAAACCAGCCATGACTACGCCAAAGTGATGGACAAAGAGCAGCTTATCGATCGCAAAGCGGTTGCCACAGTCATCAGCAACGTTGGTGAAGGCGCGTTTTACGATGGCGTACTGCGTATTGTGCGTACCGAAGATGGTAGCGCATGGACCGGTGTTCCTGTCAGCGCCTGGATTGGCGGTATCTGGTATCGCAAAGATGTGCTGGCAAAAGCGGGGCTTGAGGAGCCGAAAAACTGGCAACAGCTGCTGGACGTTGCACAGAAACTGAATGACCCGGCGAATAAAAAATACGGCATTGCGCTGCCTACAGCAGAAAGCGTGTTGACGGAACAATCCTTCTCCCAGTTTGCGTTATCCAACCAGGCTAACGTCTTTAACGCCGAAGGCAAAATCACCCTTGATACACCAGAGATGATGCAGGCACTGACCTATTACCGCGACCTTACTGCCAACACTATGCCGGGTTCTAACGACATCATGGAAGTGAAAGACGCCTTTATGAACGGCACCGCGCCGATGGCGATTTACTCCACCTATATCCTTCCGGCTGTGATTAAAGAAGGCGACCCGAAAAACGTCGGTTTCGTGGTGCCAACCGAGAAAAACTCTGCGGTCTACGGCATGTTGACCTCGCTGACCATTACCGCCGGGCAAAAGACCGAAGAGACGGAAGCAGCAGAAAAATTTGTCACCTTTATGGAGCAGGCAGACAACATTGCCGACTGGGTGATGATGTCGCCAGGTGCTGCGCTGCCGGTGAATAAAGCGGTGGTGACTACCGCCACCTGGAAAGACAACGACGTTATTAAGGCGCTGGGTGAACTACCGAATCAGCTAATCGGTGAACTGCCAAATATTCAGGTTTTTGGCGCAGTAGGGGATAAAAACTTTACCCGCATGGGTGATGTGACGGGTTCTGGCGTGGTGAGTTCAATGGTGCATAACGTCACCGTGGGTAAAGCCGATCTCTCTACTACGCTGCAAGCGAGCCAGAAAAAACTGGATGAACTGATCGAACAGCACTAA", - "dna_sequence_length": 1293, - "functions": [ - "putative ABC sugar transporter periplasmic binding protein" - ], - "id": "CDS_1295", - "location": [ - [ - "NC_000913", - 1371909, - "+", - 1293 - ] - ], - "md5": "9821173302c8b5f8261d53845ec4d58f", - "parent_gene": "", - "protein_md5": "aa4dd4ee8be63d6f00347aabeeef97a3", - "protein_translation": "MIKSKIVLLSALVSCALISGCKEENKTNVSIEFMHSSVEQERQAVISKLIARFEKENPGITVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKEQLIDRKAVATVISNVGEGAFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEEPKNWQQLLDVAQKLNDPANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEGKITLDTPEMMQALTYYRDLTANTMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTSLTITAGQKTEETEAAEKFVTFMEQADNIADWVMMSPGAALPVNKAVVTTATWKDNDVIKALGELPNQLIGELPNIQVFGAVGDKNFTRMGDVTGSGVVSSMVHNVTVGKADLSTTLQASQKKLDELIEQH", - "protein_translation_length": 430, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004405" - ], - [ - "gene_synonym", - "GI:16129272" - ], - [ - "gene_synonym", - "b1311" - ], - [ - "gene_synonym", - "EcoGene:EG13912" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFR7" - ], - [ - "gene_synonym", - "ECK1306" - ], - [ - "gene_synonym", - "JW1304" - ], - [ - "gene_synonym", - "GeneID:945888" - ], - [ - "gene_synonym", - "ycjO" - ], - [ - "gene_synonym", - "NP_415827.1" - ] - ], - "dna_sequence": "ATGAACAGGCTTTTTTCAGGTCGTTCCGATATGCCCTTTGCGCTGCTGCTTCTCGCGCCCAGCTTATTACTGCTGGGCGGTCTGGTGGCGTGGCCGATGGTGTCGAATATCGAAATCAGTTTTTTACGTCTGCCGCTCAATCCCAACATCGAGTCAACGTTTGTTGGGGTGAGCAACTATGTGCGTATCCTCTCCGATCCCGGCTTCTGGCATTCGCTGTGGATGACGGTCTGGTATACCGCGCTGGTGGTGGCGGGCAGCACCGTGCTCGGGCTGGCGGTGGCGATGTTTTTCAACCGCGAGTTCCGCCTGCGCAAAACCGCGCGTTCGCTGGTGATCCTCTCCTACGTAACGCCGTCCATTTCGCTGGTGTTCGCCTGGAAATACATGTTCAACAACGGCTACGGCATTGTTAACTACCTCGGCGTCGATCTTCTGCATCTCTATGAGCAGGCACCGCTGTGGTTCGATAATCCGGGCAGTAGCTTTGTGCTGGTGGTGCTGTTCGCCATCTGGCGCTACTTCCCGTATGCCTTTATCTCGTTTCTGGCGATTTTGCAGACCATCGACAAATCGCTGTACGAAGCGGCAGAGATGGATGGCGCTAATGCCTGGCAACGGTTTCGTATCGTCACGCTGCCCGCAATTATGCCGGTCCTGGCGACGGTGGTGACACTGCGCACCATCTGGATGTTCTACATGTTCGCGGATGTTTATTTGCTGACGACCAAGGTCGATATTCTCGGTGTATATCTCTACAAAACCGCCTTTGCCTTTAATGATTTAGGAAAAGCGGCGGCGATCTCGGTGGTGCTCTTCATCATTATTTTCGCTGTCATTCTGCTGACCAGGAAACGGGTGAACCTCAATGGCAACAAATAA", - "dna_sequence_length": 882, - "functions": [ - "putative sugar ABC transporter permease" - ], - "id": "CDS_1296", - "location": [ - [ - "NC_000913", - 1373222, - "+", - 882 - ] - ], - "md5": "f44a00a89effec500932c7e3b55ec8a9", - "parent_gene": "", - "protein_md5": "31d267a4e80d9caed27ae117032c4ea9", - "protein_translation": "MNRLFSGRSDMPFALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIESTFVGVSNYVRILSDPGFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTPSISLVFAWKYMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQTIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLTTKVDILGVYLYKTAFAFNDLGKAAAISVVLFIIIFAVILLTRKRVNLNGNK", - "protein_translation_length": 293, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ycjP" - ], - [ - "gene_synonym", - "GeneID:945892" - ], - [ - "gene_synonym", - "ASAP:ABE-0004409" - ], - [ - "gene_synonym", - "GI:16129273" - ], - [ - "gene_synonym", - "EcoGene:EG13913" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77716" - ], - [ - "gene_synonym", - "b1312" - ], - [ - "gene_synonym", - "NP_415828.1" - ], - [ - "gene_synonym", - "JW1305" - ], - [ - "gene_synonym", - "ECK1307" - ] - ], - "dna_sequence": "ATGGCAACAAATAAACGCACACTCAGTCGCATCGGTTTTTACTGCGGGCTGGCGCTGTTTCTCATCATCACGCTGTTTCCATTTTTTGTGATGCTGATGACCTCGTTCAAGGGCGCGAAAGAGGCGATCTCACTGCATCCTACGCTGCTGCCGCAGCAGTGGACGCTGGAGCATTACGTCGACATTTTTAACCCGATGATTTTCCCGTTTGTCGACTACTTCCGTAACAGTCTGGTGGTGTCTGTGGTTTCATCCGTGGTGGCGGTATTCCTCGGCATTCTTGGGGCTTACGCGCTTTCCCGCCTGCGCTTTAAAGGTCGGATGACCATCAACGCCAGCTTTTACACGGTGTATATGTTCTCTGGCATTTTGCTGGTGGTGCCGCTTTTCAAAATCATCACCGCGCTTGGCATTTACGACACTGAGATGGCGCTGATCATCACCATGGTGACGCAAACTCTGCCCACCGCCGTGTTTATGCTGAAAAGCTACTTCGACACCATCCCCGATGAGATCGAAGAAGCGGCGATGATGGATGGCCTCAACCGTCTGCAAATTATCTTCCGCATCACCGTGCCGTTGGCGATGTCCGGGCTGATATCCGTGTTCGTCTACTGCTTTATGGTGGCGTGGAACGACTATCTGTTTGCGTCGATTTTCCTCTCCAGCGCCAGCAATTTCACCTTACCGGTGGGCCTGAACGCGCTGTTCAGTACGCCAGATTACATCTGGGGACGGATGATGGCGGCCTCACTGGTGACCGCATTGCCGGTGGTGATTATGTATGCGCTTTCGGAACGTTTTATTAAGAGTGGTTTGACCGCCGGTGGCGTGAAGGGCTAA", - "dna_sequence_length": 843, - "functions": [ - "putative sugar ABC transporter permease" - ], - "id": "CDS_1297", - "location": [ - [ - "NC_000913", - 1374090, - "+", - 843 - ] - ], - "md5": "eeaeff85f9e8c4651654940958d9191e", - "parent_gene": "", - "protein_md5": "da76b740914b329105707b267c004b82", - "protein_translation": "MATNKRTLSRIGFYCGLALFLIITLFPFFVMLMTSFKGAKEAISLHPTLLPQQWTLEHYVDIFNPMIFPFVDYFRNSLVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFSGILLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTPDYIWGRMMAASLVTALPVVIMYALSERFIKSGLTAGGVKG", - "protein_translation_length": 280, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004412" - ], - [ - "gene_synonym", - "ycjQ" - ], - [ - "gene_synonym", - "GeneID:945971" - ], - [ - "gene_synonym", - "NP_415829.1" - ], - [ - "gene_synonym", - "EcoGene:EG13914" - ], - [ - "gene_synonym", - "GI:16129274" - ], - [ - "gene_synonym", - "b1313" - ], - [ - "gene_synonym", - "ECK1308" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76043" - ], - [ - "gene_synonym", - "JW1306" - ] - ], - "dna_sequence": "ATGAAAAAGTTAGTAGCCACAGCACCGCGTGTTGCTGCGCTGGTTGAGTATGAAGATCGGGCGATTTTAGCTAATGAAGTGAAGATCCGCGTGCGTTTCGGCGCACCGAAACACGGAACGGAAGTGGTCGACTTCCGCGCCGCCAGCCCGTTTATTGATGAAGACTTTAACGGCGAATGGCAGATGTTCACTCCGCGTCCGGCAGATGCGCCGCGCGGCATTGAGTTTGGCAAATTCCAGCTTGGCAACATGGTGGTTGGCGACATTATCGAGTGCGGCAGCGACGTTACCGACTACGCGGTGGGCGACAGCGTATGCGGCTACGGCCCGCTCTCCGAGACGGTCATCATTAACGCAGTGAATAACTACAAGCTGCGCAAAATGCCGCAAGGCAGCTCCTGGAAAAACGCCGTCTGCTACGACCCGGCGCAGTTTGCCATGAGCGGCGTGCGCGATGCCAACGTGCGCGTAGGGGATTTTGTGGTGGTGGTAGGGCTTGGCGCAATCGGTCAAATTGCCATCCAACTGGCTAAACGCGCTGGCGCTTCTGTGGTGATTGGCGTCGATCCTATCGCCCATCGCTGTGATATTGCCCGTCGCCACGGCGCGGATTTCTGCCTTAACCCCATCGGCACTGATGTAGGTAAAGAGATCAAAACGCTGACCGGCAAGCAGGGTGCCGATGTGATTATCGAAACCAGCGGCTACGCCGACGCGCTGCAATCGGCGCTCCGCGGTCTGGCTTATGGCGGCACCATCTCCTATGTCGCGTTTGCCAAGCCGTTTGCCGAAGGTTTTAACCTCGGACGCGAAGCGCATTTCAATAACGCCAAAATTGTCTTCTCTCGCGCGTGCAGCGAACCGAACCCGGATTATCCGCGCTGGAGCCGCAAGCGTATTGAAGAAACCTGTTGGGAACTGCTGATGAACGGTTATCTCAATTGCGAAGATTTAATCGACCCGGTGGTGACCTTTGCCAATAGCCCGGAAAGCTATATGCAGTATGTCGACCAGCATCCGGAACAGAGCATCAAAATGGGCGTTACGTTTTAA", - "dna_sequence_length": 1053, - "functions": [ - "putative Zn-dependent NAD(P)-binding oxidoreductase" - ], - "id": "CDS_1298", - "location": [ - [ - "NC_000913", - 1374963, - "+", - 1053 - ] - ], - "md5": "cc5464064f24ec9c29d6840f0347495d", - "parent_gene": "", - "protein_md5": "fc1e8d51ffb06a57cec6c6ce903f5e40", - "protein_translation": "MKKLVATAPRVAALVEYEDRAILANEVKIRVRFGAPKHGTEVVDFRAASPFIDEDFNGEWQMFTPRPADAPRGIEFGKFQLGNMVVGDIIECGSDVTDYAVGDSVCGYGPLSETVIINAVNNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDFVVVVGLGAIGQIAIQLAKRAGASVVIGVDPIAHRCDIARRHGADFCLNPIGTDVGKEIKTLTGKQGADVIIETSGYADALQSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRIEETCWELLMNGYLNCEDLIDPVVTFANSPESYMQYVDQHPEQSIKMGVTF", - "protein_translation_length": 350, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ycjR" - ], - [ - "gene_synonym", - "GI:90111248" - ], - [ - "gene_synonym", - "b1314" - ], - [ - "gene_synonym", - "EcoGene:EG13915" - ], - [ - "gene_synonym", - "ASAP:ABE-0004414" - ], - [ - "gene_synonym", - "GeneID:947427" - ], - [ - "gene_synonym", - "ECK1309" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76044" - ], - [ - "gene_synonym", - "NP_415830.2" - ], - [ - "gene_synonym", - "JW5202" - ] - ], - "dna_sequence": "ATGAAAATCGGCACACAGAATCAGGCGTTCTTTCCGGAAAACATTCTGGAGAAATTTCGTTATATCAAAGAGATGGGCTTCGATGGTTTTGAGATTGACGGCAAACTGCTGGTTAACAACATCGAAGAAGTCAAAGCGGCGATCAAAGAAACCGGTTTACCGGTGACCACCGCCTGCGGTGGCTATGACGGATGGATTGGCGACTTTATCGAAGAGCGTCGTCTTAATGGCTTAAAGCAGATCGAGCGCATTCTCGAAGCGCTGGCAGAAGTGGGCGGTAAAGGCATCGTCGTTCCGGCTGCGTGGGGCATGTTTACCTTCCGCTTACCGCCGATGACCTCGCCGCGTAGCCTGGACGGCGACCGCAAAATGGTGAGTGATTCCCTGCGCGTACTGGAACAGGTCGCCGCGCGTACCGGAACCGTGGTGTATCTCGAACCGTTAAACCGCTATCAGGATCATATGATCAACACCCTCGCCGATGCCCGCCGTTACATCGTCGAAAACGATCTTAAACATGTACAGATTATCGGCGATTTCTATCACATGAATATCGAAGAAGATAACCTGGCGCAGGCGCTGCATGACAACCGCGACCTGCTCGGTCATGTGCATATTGCGGATAACCATCGCTACCAGCCGGGCAGCGGCACCCTGGATTTCCACGCGCTGTTTGAACAGCTGCGCGCGGATAACTATCAGGGCTATGTAGTGTACGAAGGGCGTATCCGGGCGGAAGATCCTGCCCAGGCGTACCGTGATTCGTTGGCCTGGTTGCGTACCTGCTAA", - "dna_sequence_length": 789, - "functions": [ - "putative TIM alpha/beta barrel enzyme" - ], - "id": "CDS_1299", - "location": [ - [ - "NC_000913", - 1376034, - "+", - 789 - ] - ], - "md5": "db03eec6d4d6a859aef9d24ba067daab", - "parent_gene": "", - "protein_md5": "bd0e98425bc48d75d410637d99969836", - "protein_translation": "MKIGTQNQAFFPENILEKFRYIKEMGFDGFEIDGKLLVNNIEEVKAAIKETGLPVTTACGGYDGWIGDFIEERRLNGLKQIERILEALAEVGGKGIVVPAAWGMFTFRLPPMTSPRSLDGDRKMVSDSLRVLEQVAARTGTVVYLEPLNRYQDHMINTLADARRYIVENDLKHVQIIGDFYHMNIEEDNLAQALHDNRDLLGHVHIADNHRYQPGSGTLDFHALFEQLRADNYQGYVVYEGRIRAEDPAQAYRDSLAWLRTC", - "protein_translation_length": 262, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948589" - ], - [ - "gene_synonym", - "ycjS" - ], - [ - "gene_synonym", - "JW1308" - ], - [ - "gene_synonym", - "b1315" - ], - [ - "gene_synonym", - "EcoGene:EG13916" - ], - [ - "gene_synonym", - "GI:16129276" - ], - [ - "gene_synonym", - "NP_415831.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004416" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77503" - ], - [ - "gene_synonym", - "ECK1310" - ] - ], - "dna_sequence": "GTGAAAAGTGCAATGACAAGCTCTCCGCTGCGGGTCGCGATAATAGGCGCAGGCCAGGTGGCGGATAAGGTTCATGCTTCGTACTACTGCACCCGCAACGATCTGGAACTGGTGGCTGTCTGTGACAGCCGCCTTTCCCAGGCGCAGGCGCTGGCAGAAAAATACGGGAATGCATCCGTGTGGGACGATCCGCAGGCCATGCTGCTGGCGGTGAAACCTGATGTGGTTAGCGTCTGCTCACCTAACCGTTTTCATTACGAACATACCCTGATGGCACTGGAAGCGGGCTGCCATGTGATGTGCGAAAAACCGCCCGCCATGACGCCAGAACAGGCGCGGGAAATGTGCGATACCGCGCGCAAACTGGGCAAGGTGCTGGCCTACGACTTTCACCATCGTTTTGCGCTCGATACGCAACAGCTGCGTGAACAGGTGACCAACGGCGTTTTGGGAGAGATTTACGTTACCACCGCCCGCGCCCTGCGTCGCTGCGGCGTTCCCGGCTGGGGTGTCTTTACCAATAAAGAACTGCAGGGTGGTGGCCCGCTGATCGACATCGGCATTCATATGCTGGATGCTGCGATGTATGTGCTGGGCTTTCCGGCGGTGAAAAGCGTGAATGCGCATAGCTTTCAAAAGATCGGCACGCAAAAGAGCTGTGGTCAATTTGGTGAGTGGGATCCGGCAACTTACAGCGTCGAAGATTCGCTGTTTGGCACCATTGAATTTCATAACGGCGGCATTCTGTGGCTGGAAACGTCATTTGCACTCAACATCCGCGAACAGTCGATTATGAACGTCAGCTTTTGTGGTGATAAAGCTGGTGCGACGCTGTTTCCAGCACATATCTACACCGATAACAACGGTGAATTAATGACGCTGATGCAACGGGAAATAGCAGACGACAACCGCCATTTGCGCAGCATGGAAGCCTTTATCAATCACGTACAGGGCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAAACAGGGACGCGTGTGGAATTATGA", - "dna_sequence_length": 1056, - "functions": [ - "putative NADH-binding oxidoreductase" - ], - "id": "CDS_1300", - "location": [ - [ - "NC_000913", - 1376832, - "+", - 1056 - ] - ], - "md5": "6f4113f8c3ade341e2ba28e6d7d635ff", - "parent_gene": "", - "protein_md5": "dcd63166568ea149de098bc50e8789eb", - "protein_translation": "MKSAMTSSPLRVAIIGAGQVADKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKPDVVSVCSPNRFHYEHTLMALEAGCHVMCEKPPAMTPEQAREMCDTARKLGKVLAYDFHHRFALDTQQLREQVTNGVLGEIYVTTARALRRCGVPGWGVFTNKELQGGGPLIDIGIHMLDAAMYVLGFPAVKSVNAHSFQKIGTQKSCGQFGEWDPATYSVEDSLFGTIEFHNGGILWLETSFALNIREQSIMNVSFCGDKAGATLFPAHIYTDNNGELMTLMQREIADDNRHLRSMEAFINHVQGKPVMIADAEQGYIIQQLVAALYQSAETGTRVEL", - "protein_translation_length": 351, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415832.1" - ], - [ - "gene_synonym", - "GeneID:945895" - ], - [ - "gene_synonym", - "ycjT" - ], - [ - "gene_synonym", - "ASAP:ABE-0004418" - ], - [ - "gene_synonym", - "EcoGene:EG13917" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77154" - ], - [ - "gene_synonym", - "b1316" - ], - [ - "gene_synonym", - "GI:16129277" - ], - [ - "gene_synonym", - "ECK1311" - ], - [ - "gene_synonym", - "JW1309" - ] - ], - "dna_sequence": "ATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGGCGCAGGGGAACGGCTATCTTGGGCTTCGCGCCAGCCATGAAGAAGATTACACGCGCCAGACGCGAGGGATGTATCTGGCGGGGCTGTATCATCGGGCGGGAAAAGGTGAAATCAACGAACTGGTGAACCTGCCTGATGTCGTGGGGATGGAGATTGCCATAAATGGTGAGGTTTTCTCGTTATCCCACGAAGCCTGGCAGCGTGAGCTTGACTTTGCCAGTGGCGAATTACGCCGCAATGTTGTCTGGCGTACCAGCAACGGCTCAGGTTACACCATCGCCAGCCGTCGCTTTGTTTCGGCAGACCAACTGCCGCTCATTGCGCTGGAAATCACTATTACGCCACTGGACGCCGACGCGTCAGTGCTGATTTCAACAGGCATTGACGCCACGCAAACCAATCACGGTCGCCAACATCTCGACGAAACCCAGGTGCGGGTGTTTGGTCAGCATCTGATGCAGGGGAGCTACACCACCCAGGATGGACGCAGTGATGTGGCCATCAGCTGTTGCTGTAAGGTGAGCGGTGATGTGCAGCAATGCTATACCGCCAAAGAGCGCCGTTTACTGCAACATACCAGTGCGCAGCTTCATGCAGGCGAGACAATGACGTTGCAAAAACTGGTGTGGATCGACTGGCGGGATGACAGGCAAGCTGCTTTAGACGAGTGGGGCAGCGCGTCGCTTCGCCAGCTTGAAATGTGCGCGCAGCAGAGTTACGACCAACTTCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGCGGCGAAGCGCACGATCAGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCATTGCGGCAAAAGGCTTAACCGGCGAAGGCTACAAAGGCCACGTTTTCTGGGATACAGAAGTATTTTTGTTACCGTTTCATCTGTTTAGCGATCCGACGGTTGCCCGAAGTTTACTGCGTTATCGCTGGCACAACTTGCCAGGCGCGCAGGAGAAAGCGCGACGCAACGGCTGGCAGGGCGCGCTATTTCCGTGGGAAAGCGCGCGCAGCGGCGAAGAAGAGACGCCGGAATTTGCCGCCATTAACATTCGCACCGGGCTGCGGCAAAAAGTGGCCTCGGCGCAGGCGGAACATCATCTGGTGGCCGATATCGCCTGGGCGGTTATTCAATACTGGCAGACCACGGGGGATGAAAGTTTCATTGCGCATGAAGGCATGGCGCTACTTCTGGAGACGGCAAAGTTCTGGATTAGCCGCGCGGTGAGAGTTAACGATCGTCTGGAAATTCATGATGTTATTGGGCCAGACGAATATACCGAACATGTCAATAATAATGCATACACCAGCTATATGGCCCGCTACAACGTTCAACAGGCGCTGAATATTGCCCGCCAGTTCGGCTGTAGCGACGATGCGTTTATCCATCGCGCCGAAATGTTCCTCAAAGAGCTATGGATGCCAGAAATTCAGCCCGACGGCGTTTTGCCGCAGGATGATTCGTTTATGGCTAAGCCGGCGATTAATCTGGCGAAATACAAAGCGGCGGCGGGGAAGCAAACCATACTGCTGGATTATTCACGCGCAGAAGTGAACGAGATGCAGATCCTCAAACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCAGTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCGCACTATTCACGACTCGTCATTAAGTAAAGCAATCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGCGCGAGGGGACTGAAATCGATCTTGGTGCTGATCCGCATAGTTGTGATGATGGTATCCATGCTGCCGCAACTGGCGCTATCTGGCTGGGGGCGATTCAGGGTTTTGCCGGGGTGAGCGTGCGTGACGGTGAATTGCATCTCAATCCGGCGTTACCTGAGCAGTGGCAACAGTTGTCTTTCCCTCTGTTCTGGCAGGGCTGCGAATTACAGGTCACTCTTGACGCGCAGCGTATTGCGATTCGAACTTCTGCGCCCGTTTCACTGCGTTTGAACGGTCAGCTTATAACCGTGGCTGAAGAATCTGTTTTCTGTTTGGGTGATTTTATTTTGCCCTTCAATGGGACCGCTACCAAACATCAGGAGGATGAATGA", - "dna_sequence_length": 2268, - "functions": [ - "putative family 65 glycosyl hydrolase" - ], - "id": "CDS_1301", - "location": [ - [ - "NC_000913", - 1377884, - "+", - 2268 - ] - ], - "md5": "13643e2fb1d8fcccfbfca0e77c4952ee", - "parent_gene": "", - "protein_md5": "058d060da2dbd5f313c82d9e343c3550", - "protein_translation": "MTRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKGEINELVNLPDVVGMEIAINGEVFSLSHEAWQRELDFASGELRRNVVWRTSNGSGYTIASRRFVSADQLPLIALEITITPLDADASVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGSYTTQDGRSDVAISCCCKVSGDVQQCYTAKERRLLQHTSAQLHAGETMTLQKLVWIDWRDDRQAALDEWGSASLRQLEMCAQQSYDQLLAASTENWRQWWQKRRITVNGGEAHDQQALDYALYHLRIMTPAHDERSSIAAKGLTGEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIRTGLRQKVASAQAEHHLVADIAWAVIQYWQTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNNNAYTSYMARYNVQQALNIARQFGCSDDAFIHRAEMFLKELWMPEIQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLDYSRAEVNEMQILKQADVVMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDLGADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSLRLNGQLITVAEESVFCLGDFILPFNGTATKHQEDE", - "protein_translation_length": 755, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415833.1" - ], - [ - "gene_synonym", - "GeneID:945891" - ], - [ - "gene_synonym", - "GI:16129278" - ], - [ - "gene_synonym", - "b1317" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77366" - ], - [ - "gene_synonym", - "ycjU" - ], - [ - "gene_synonym", - "EcoGene:EG13918" - ], - [ - "gene_synonym", - "ASAP:ABE-0004420" - ], - [ - "gene_synonym", - "JW1310" - ], - [ - "gene_synonym", - "ECK1312" - ] - ], - "dna_sequence": "ATGAAACTGCAAGGGGTAATTTTCGATCTGGATGGTGTAATCACCGATACCGCGCATCTGCATTTCCAGGCGTGGCAGCAGATTGCCGCTGAAATTGGCATCAGCATTGATGCGCAGTTTAACGAATCCCTAAAAGGGATCAGCCGCGATGAGTCTCTGCGGCGCATTCTGCAACACGGGGGCAAAGAGGGCGACTTTAACTCGCAGGAGAGGGCGCAACTGGCGTATCGCAAAAATCTGCTCTATGTCCACTCACTACGCGAGTTGACGGTCAACGCTGTTCTACCCGGCATTCGCTCTTTGCTGGCAGATCTCCGTGCACAGCAGATCTCGGTTGGGCTGGCTTCTGTCTCCCTGAATGCGCCGACGATTTTAGCGGCGCTGGAGCTGCGCGAGTTTTTCACCTTCTGCGCGGATGCTTCCCAACTTAAAAACTCGAAACCGGACCCGGAAATCTTTCTCGCCGCCTGTGCAGGGCTGGGCGTGCCGCCGCAGGCATGTATCGGCATTGAAGATGCGCAGGCGGGCATTGACGCCATTAACGCCAGCGGTATGCGCTCGGTGGGGATCGGCGCGGGCTTAACCGGGGCGCAATTACTGTTGCCTTCAACGGAATCACTCACCTGGCCGCGGTTATCGGCCTTCTGGCAAAACGTATAG", - "dna_sequence_length": 660, - "functions": [ - "beta-phosphoglucomutase" - ], - "id": "CDS_1302", - "location": [ - [ - "NC_000913", - 1380148, - "+", - 660 - ] - ], - "md5": "8e8a772186db96df93667c15ff130490", - "parent_gene": "", - "protein_md5": "bf9e983c20f62225bfb3640f02791fad", - "protein_translation": "MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4524" - ], - [ - "gene_synonym", - "GeneID:4306141" - ], - [ - "gene_synonym", - "ycjV" - ], - [ - "gene_synonym", - "EcoGene:EG13919" - ], - [ - "gene_synonym", - "ASAP:ABE-0285045" - ], - [ - "gene_synonym", - "ymjB" - ], - [ - "gene_synonym", - "ASAP:ABE-0004422" - ], - [ - "gene_synonym", - "JW1311" - ], - [ - "gene_synonym", - "ECK1313" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77481" - ] - ], - "dna_sequence": "ATGGCTCAGCTTTCGTTACAACATATTCAAAAAATCTACGATAACCAGGTGCATGTGGTGAAGGACTTCAACCTGGAAATTGCCGATAAAGAGTTCATCGTGTTTGTCGGCCCGTCGGGCTGCGGTAAGTCGACCACCCTGCGCATGATTGCCGGGCTTGAGGAGATCAGCGGCGGCGATCTGTTGATCGACGGCAAACGAATGAATGACGTTCCAGCCAAAGCACGCAATATAGCGATGGTGTTCCAGAACTACGCGTTGTATCCGCATATGACGGTTTACGACAACATGGCGTTTGGTCTGAAGATGCAAAAAATCGCCAAAGAGGTGATTGATGAGCGGGTGAACTGGGCGGCGCAAATTCTCGGCCTGCGTGAGTACCTGAAACGTAAGCCGGGGGCGCTTTCCGGCGGGCAACGTCAGCGAGTGGCGCTTGGGCGGGCGATTGTACGCGAAGCGGGCGTGTTTTTAATGGATGAACCGCTCTCTAACCTTGATGCCAAGCTGCGCGTGCAAATGCGCGCAGAGATCAGCAAGCTGCATCAGAAACTGAACACCACCATGATCTACGTGACCCACGATCAGACCGAAGCGATGACCATGGCGACGCGGATTGTGATTATGAAAGACGGGATTGTTCAGCAAGTAGGTGCGCCGAAAACCGTTTATAACCAACCCGCGAATATGTTTGTTTCCGGATTTATTGGATCACCAGCGATGAATTTTATTCGCGGCACGATCGATGGCGATAAATTCGTTACGGAAACGCTTAAATTAACCATTCCCGAAGAGAAATTAGCGGTTCTGAAAACACAGGAAAGTTTGCATAAGCCCATCGTGATGGGAATACGACCGGAAGATATTCATCCGGACGCGCAAGAGGAAAATAACATTTCCGCCAAAATTAGCGTGGCAGAATTAACCGGTGCGGAATTTATGCTCTACACCACGGTTGGGGGGCACGAGTTAGTGGTCCGTGCTGGTGCGTTAAATGATTATCATGCAGGAGAAAATATCACTATTCATTTTGATATGACGAAATGTCATTTCTTTGATGCAGAAACGGAAATAGCAATTCGCTAA", - "dna_sequence_length": 1083, - "id": "CDS_1303", - "location": [ - [ - "NC_000913", - 1380821, - "+", - 957 - ], - [ - "NC_000913", - 1381777, - "+", - 126 - ] - ], - "md5": "88fb1aa372714e822a63d2fe36953fa1", - "parent_gene": "", - "protein_md5": "99c12948a8d9093ce02bbf572c2c4219", - "protein_translation": "MAQLSLQHIQKIYDNQVHVVKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGDLLIDGKRMNDVPAKARNIAMVFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQILGLREYLKRKPGALSGGQRQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAMTMATRIVIMKDGIVQQVGAPKTVYNQPANMFVSGFIGSPAMNFIRGTIDGDKFVTETLKLTIPEEKLAVLKTQESLHKPIVMGIRPEDIHPDAQEENNISAKISVAELTGAEFMLYTTVGGHELVVRAGALNDYHAGENITIHFDMTKCHFFDAETEIAIR", - "protein_translation_length": 360, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129280" - ], - [ - "gene_synonym", - "b1319" - ], - [ - "gene_synonym", - "ASAP:ABE-0004425" - ], - [ - "gene_synonym", - "GeneID:945889" - ], - [ - "gene_synonym", - "ompG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76045" - ], - [ - "gene_synonym", - "JW1312" - ], - [ - "gene_synonym", - "NP_415835.1" - ], - [ - "gene_synonym", - "EcoGene:EG13428" - ], - [ - "gene_synonym", - "ECK1315" - ] - ], - "dna_sequence": "ATGAAAAAGTTATTACCCTGTACCGCACTGGTGATGTGTGCGGGAATGGCCTGCGCACAGGCCGAGGAAAGGAACGACTGGCACTTTAATATCGGCGCGATGTACGAAATAGAAAACGTCGAGGGTTATGGCGAAGATATGGATGGGCTGGCGGAGCCTTCAGTCTATTTTAATGCCGCCAACGGGCCGTGGAGAATTGCTCTGGCCTATTATCAGGAAGGGCCGGTAGATTATAGCGCGGGTAAACGTGGAACGTGGTTTGATCGCCCGGAGCTGGAGGTGCATTATCAGTTCCTCGAAAACGATGATTTCAGTTTCGGCCTGACCGGCGGTTTCCGTAATTATGGTTATCACTACGTTGATGAACCGGGTAAAGACACGGCGAATATGCAGCGCTGGAAAATCGCGCCAGACTGGGATGTGAAACTGACTGACGATTTACGTTTCAACGGTTGGTTGTCGATGTATAAATTTGCCAACGATCTGAACACTACCGGTTACGCTGATACCCGTGTCGAAACGGAAACAGGTCTGCAATATACCTTCAACGAAACGGTTGCCTTGCGAGTGAACTATTATCTCGAGCGCGGCTTCAATATGGACGACAGCCGCAATAACGGTGAGTTTTCCACGCAAGAAATTCGCGCCTATTTGCCGCTGACGCTCGGCAACCACTCGGTGACGCCGTATACGCGCATTGGGCTGGATCGCTGGAGTAACTGGGACTGGCAGGATGATATTGAACGTGAAGGCCATGATTTTAACCGTGTAGGTTTATTTTACGGTTATGATTTCCAGAACGGACTTTCCGTTTCGCTGGAATACGCGTTTGAGTGGCAGGATCACGACGAAGGCGACAGTGATAAATTCCATTATGCAGGTGTCGGCGTAAATTACTCGTTCTGA", - "dna_sequence_length": 906, - "functions": [ - "outer membrane porin G" - ], - "id": "CDS_1304", - "location": [ - [ - "NC_000913", - 1381947, - "+", - 906 - ] - ], - "md5": "aa47fc2100508b6da932d8fbe4d50764", - "parent_gene": "", - "protein_md5": "eea0ea7000d510eae36efc9635e61a16", - "protein_translation": "MKKLLPCTALVMCAGMACAQAEERNDWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAANGPWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFANDLNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSNWDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYSF", - "protein_translation_length": 301, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129281" - ], - [ - "gene_synonym", - "ycjW" - ], - [ - "gene_synonym", - "EcoGene:EG13920" - ], - [ - "gene_synonym", - "GeneID:945875" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77615" - ], - [ - "gene_synonym", - "JW1313" - ], - [ - "gene_synonym", - "NP_415836.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004428" - ], - [ - "gene_synonym", - "ECK1316" - ], - [ - "gene_synonym", - "b1320" - ] - ], - "dna_sequence": "ATGTCCCCTACTATTTATGATATTGCCAGGGTTGCAGGCGTATCAAAATCCACCGTATCACGCGTGCTGAATAAGCAAACTAATATCTCCCCGGAAGCGCGCGAAAAAGTGTTACGGGCCATTGAAGAATTACAGTATCAGCCAAACAAGCTGGCCCGCGCGCTGACCTCTTCGGGTTTTGATGCCATTATGGTGATTTCTACCCGTTCGACCAAAACTACGGCGGGTAATCCGTTTTTCTCTGAAGTTTTGCATGCCATCACCGCCAAAGCTGAAGAAGAAGGTTTCGACGTGATATTACAAACGTCGCACAATCCGGCAGAAGATCTGCAAAAATGCGAAAGCAAAATTAAGCAGAAAATGATTAAAGGCATTATTATGCTCAGTTCGCCAGCGGATGAGTCATTTTTTGCCCAACTCGATAAATATGATATTCCGGTGGTGGTGATTGGCAAAGTTGAAGGTCAATATGCCCATGTTTATTCTGTCGATACCGATAATTTTGGCGACAGCATTGCGTTGACCGATGCATTAATTGAAAGTGGGCATCAAAATATTGCCTGCCTGCATGCTCCGCTTGATGTCCATGTTTCGGTTGATCGCGTTAATGGTTATAAGCAGAGCCTGGCTGCGCATAATATTGCAGTGCGTGATGAATGGATTGTTGATGGCGGTTATACCCATGAAACTGCATTAAAAGCAGCACGGCAATTATTAAGCCAGTCACCGTTGCCTGAGGCGGTGTTTGCCACTGACAGCCTGAAATTAATGAGCATTTATCGTGCGGCAGCAGAGAAAAATATTGCTATTCCGCAGCAGTTAGCGGTGGTGGGTTATAGCAATGAAACGCTGTCATTTATTTTAACGCCTGCACCGGGCGGCATCGATGTTCCGACGCAGGAGTTAGGTCAACAAAGCTGCGAGTTATTATTCCGCTTAATTTCTGGAAAACCGTCACCACAGAATATTACCGTTGCCACGCATATGACGCTGAAATAA", - "dna_sequence_length": 999, - "functions": [ - "LacI family putative transcriptional repressor" - ], - "id": "CDS_1305", - "location": [ - [ - "NC_000913", - 1383961, - "-", - 999 - ] - ], - "md5": "15c3e532842fd2094d6d8b736a21985f", - "parent_gene": "", - "protein_md5": "824ecaee6b51f396712abd398e458f30", - "protein_translation": "MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLRAIEELQYQPNKLARALTSSGFDAIMVISTRSTKTTAGNPFFSEVLHAITAKAEEEGFDVILQTSHNPAEDLQKCESKIKQKMIKGIIMLSSPADESFFAQLDKYDIPVVVIGKVEGQYAHVYSVDTDNFGDSIALTDALIESGHQNIACLHAPLDVHVSVDRVNGYKQSLAAHNIAVRDEWIVDGGYTHETALKAARQLLSQSPLPEAVFATDSLKLMSIYRAAAEKNIAIPQQLAVVGYSNETLSFILTPAPGGIDVPTQELGQQSCELLFRLISGKPSPQNITVATHMTLK", - "protein_translation_length": 332, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129282" - ], - [ - "gene_synonym", - "b1321" - ], - [ - "gene_synonym", - "NP_415837.1" - ], - [ - "gene_synonym", - "EcoGene:EG13921" - ], - [ - "gene_synonym", - "ycjX" - ], - [ - "gene_synonym", - "GeneID:945872" - ], - [ - "gene_synonym", - "JW1314" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76046" - ], - [ - "gene_synonym", - "ASAP:ABE-0004433" - ], - [ - "gene_synonym", - "ECK1317" - ] - ], - "dna_sequence": "ATGAAGCGACTTAAAAATGAACTCAATGCGCTGGTGAATCGGGGTGTCGACAGACATCTGCGCCTCGCTGTAACCGGACTTAGCCGCAGCGGCAAAACAGCGTTTATCACCGCGATGGTTAATCAGTTGCTTAATATTCACGCCGGAGCACGTTTGCCGCTGTTAAGTGCGGTGCGTGAAGAGCGCCTGCTGGGCGTGAAACGCATTCCCCAGCGTGACTTTGGCATTCCGCGCTTCACCTATGACGAAGGGCTGGCGCAGTTATATGGCGATCCACCCGCCTGGCCAACGCCAACGCGCGGCGTCAGTGAAATCCGCCTGGCGCTACGTTTTAAATCGAATGATTCGCTGCTACGCCACTTTAAGGATACCTCCACGCTGTATCTGGAAATTGTGGATTATCCCGGCGAATGGTTGCTCGACCTGCCGATGCTGGCGCAGGACTATTTAAGCTGGTCGCGCCAGATGACGGGCTTACTCAATGGTCAGCGCGGAGAATGGTCGGCGAAATGGCGAATGATGAGCGAAGGGCTGGACCCGCTAGCGCCTGCCGACGAAAACCGGCTGGCGGACATTGCCGCCGCGTGGACCGATTATCTCCACCACTGTAAAGAGCAGGGGCTGCACTTTATTCAGCCTGGGCGCTTTGTCTTGCCGGGAGATATGGCAGGTGCGCCCGCGCTGCAATTCTTCCCGTGGCCGGATGTCGATACCTGGGGCGAGTCCAAACTGGCGCAGGCCGATAAGCATACCAATGCCGGAATGCTGCGCGAGCGCTTTAATTATTACTGCGAGAAGGTGGTGAAGGGGTTCTATAAGAATCATTTTCTGCGCTTTGACCGCCAGATTGTGCTGGTGGATTGCCTGCAACCTCTCAACAGTGGGCCACAGGCATTTAATGATATGCGTCTGGCACTGACGCAGCTGATGCAAAGTTTTCACTACGGGCAGCGTACCCTGTTCCGGCGTTTGTTTTCGCCGGTTATCGATAAGCTATTGTTTGCTGCCACTAAAGCGGACCATGTGACCATCGATCAGCACGCTAATATGGTTTCATTACTGCAACAACTGATTCAGGATGCCTGGCAAAATGCGGCGTTCGAAGGGATCAGCATGGACTGCCTGGGGCTGGCGTCAGTTCAGGCGACCACCAGCGGCATTATTGATGTTAACGGTGAGAAAATCCCGGCGCTGCGTGGTAATCGACTTAGCGATGGCGCACCGCTCACTGTTTATCCTGGCGAAGTTCCCGCACGTTTGCCTGGTCAGGCGTTCTGGGATAAGCAAGGCTTCCAGTTTGAGGCATTTCGTCCGCAGGTGATGGATGTCGACAAACCACTACCGCATATTCGTCTTGATGCTGCGCTGGAATTTTTAATAGGAGATAAATTGCGATGA", 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"b1322" - ], - [ - "gene_synonym", - "NP_415838.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8R7" - ], - [ - "gene_synonym", - "JW1315" - ], - [ - "gene_synonym", - "ECK1318" - ], - [ - "gene_synonym", - "ycjF" - ], - [ - "gene_synonym", - "ASAP:ABE-0004436" - ], - [ - "gene_synonym", - "EcoGene:EG12870" - ] - ], - "dna_sequence": "ATGACCGAACCGTTAAAACCACGTATTGATTTCGACGGTCCTCTGGAGGTCGATCAGAATCCTAAATTCAGGGCGCAGCAGACCTTTGACGAAAATCAGGCGCAAAATTTTGCCCCGGCCACGCTCGACGAAGCGCAGGAAGAAGAGGGGCAAGTCGAAGCGGTAATGGACGCAGCGTTACGTCCGAAACGCAGCCTGTGGCGCAAAATGGTGATGGGAGGGCTGGCTCTGTTTGGCGCAAGCGTTGTCGGGCAGGGTGTACAGTGGACAATGAATGCCTGGCAAACCCAGGACTGGGTGGCGCTGGGTGGATGTGCCGCTGGGGCATTGATTATCGGCGCTGGCGTAGGTTCTGTGGTAACAGAGTGGCGGCGCTTATGGCGCTTGCGACAGCGCGCCCATGAACGCGACGAAGCGCGTGATTTATTGCATAGCCACGGCACGGGCAAAGGCCGCGCATTTTGCGAAAAACTGGCGCAGCAGGCGGGTATTGATCAGTCGCATCCGGCGCTGCAACGCTGGTATGCCTCAATCCATGAAACGCAAAACGACCGTGAAGTGGTCAGCCTGTATGCGCATTTGGTCCAGCCAGTTTTAGATGCCCAGGCGCGGCGCGAAATCAGCCGTTCGGCGGCGGAATCAACGTTGATGATTGCGGTCAGCCCGCTGGCGTTGGTCGATATGGCGTTTATCGCCTGGCGCAATCTGCGTTTAATTAATCGCATCGCCACGCTGTATGGCATTGAACTGGGGTATTACAGCCGTTTGCGTCTGTTTAAGCTGGTATTGCTGAATATCGCTTTTGCCGGAGCCAGCGAACTGGTGCGCGAAGTGGGGATGGACTGGATGTCGCAAGATCTCGCTGCTCGTTTGTCTACCCGCGCAGCTCAGGGGATTGGTGCAGGACTTCTGACGGCACGACTCGGGATTAAAGCTATGGAGCTTTGCCGCCCGCTGCCGTGGATTGACGATGACAAACCTCGCCTCGGGGATTTCCGTCGTCAGCTTATCGGTCAGGTGAAAGAAACGCTGCAAAAAGGCAAAACGCCCAGCGAAAAATAA", - "dna_sequence_length": 1062, - "functions": [ - "UPF0283 family inner membrane protein" - ], - "id": "CDS_1307", - "location": [ - [ - "NC_000913", - 1385511, - "+", - 1062 - ] - ], - "md5": "ca6bcadd9cfe68d61e36ee374131860d", - "parent_gene": "", - "protein_md5": "48db9e65d08ec3300ab00844891161d9", - "protein_translation": "MTEPLKPRIDFDGPLEVDQNPKFRAQQTFDENQAQNFAPATLDEAQEEEGQVEAVMDAALRPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVALGGCAAGALIIGAGVGSVVTEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAQQAGIDQSHPALQRWYASIHETQNDREVVSLYAHLVQPVLDAQARREISRSAAESTLMIAVSPLALVDMAFIAWRNLRLINRIATLYGIELGYYSRLRLFKLVLLNIAFAGASELVREVGMDWMSQDLAARLSTRAAQGIGAGLLTARLGIKAMELCRPLPWIDDDKPRLGDFRRQLIGQVKETLQKGKTPSEK", - "protein_translation_length": 353, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004440" - ], - [ - "gene_synonym", - "tyrR" - ], - [ - "gene_synonym", - "GI:16129284" - ], - [ - "gene_synonym", - "b1323" - ], - [ - "gene_synonym", - "GeneID:945879" - ], - [ - "gene_synonym", - "NP_415839.1" - ], - [ - "gene_synonym", - "JW1316" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07604" - ], - [ - "gene_synonym", - "ECK1319" - ], - [ - "gene_synonym", - "EcoGene:EG11042" - ] - ], - "dna_sequence": "ATGCGTCTGGAAGTCTTTTGTGAAGACCGACTCGGTCTGACCCGCGAATTACTCGATCTACTCGTGCTAAGAGGCATTGATTTACGCGGTATTGAGATTGATCCCATTGGGCGAATCTACCTCAATTTTGCTGAACTGGAGTTTGAGAGTTTCAGCAGTCTGATGGCCGAAATACGCCGTATTGCGGGTGTTACCGATGTGCGTACTGTCCCGTGGATGCCTTCCGAACGTGAGCATCTGGCGTTGAGCGCGTTACTGGAGGCGTTGCCTGAACCTGTGCTCTCTGTCGATATGAAAAGCAAAGTGGATATGGCGAACCCGGCGAGCTGTCAGCTTTTTGGGCAAAAATTGGATCGCCTGCGCAACCATACCGCCGCACAATTGATTAACGGCTTTAATTTTTTACGTTGGCTGGAAAGCGAACCGCAAGATTCGCATAACGAGCATGTCGTTATTAATGGGCAGAATTTCCTGATGGAGATTACGCCTGTTTATCTTCAGGATGAAAATGATCAACACGTCCTGACCGGTGCGGTGGTGATGTTGCGATCAACGATTCGTATGGGCCGCCAGTTGCAAAATGTCGCCGCCCAGGACGTCAGCGCCTTCAGTCAAATTGTCGCCGTCAGCCCGAAAATGAAGCATGTTGTCGAACAGGCGCAGAAACTGGCGATGCTAAGCGCGCCGCTGCTGATTACGGGTGACACAGGTACAGGTAAAGATCTCTTTGCCTACGCCTGCCATCAGGCAAGCCCCAGAGCGGGCAAACCTTACCTGGCGCTGAACTGTGCGTCTATACCGGAAGATGCGGTCGAGAGTGAACTGTTTGGTCATGCTCCGGAAGGGAAGAAAGGATTCTTTGAGCAGGCGAACGGTGGTTCGGTGCTGTTGGATGAAATAGGGGAAATGTCACCACGGATGCAGGCGAAATTACTGCGTTTCCTTAATGATGGCACTTTCCGTCGGGTTGGCGAAGACCATGAGGTGCATGTCGATGTGCGGGTGATTTGCGCTACGCAGAAGAATCTGGTCGAACTGGTGCAAAAAGGCATGTTCCGTGAAGATCTCTATTATCGTCTGAACGTGTTGACGCTCAATCTGCCGCCGCTACGTGACTGTCCGCAGGACATCATGCCGTTAACTGAGCTGTTCGTCGCCCGCTTTGCCGACGAGCAGGGCGTGCCGCGTCCGAAACTGGCCGCTGACCTGAATACTGTACTTACGCGTTATGCGTGGCCGGGAAATGTGCGGCAGTTAAAGAACGCTATCTATCGCGCACTGACACAACTGGACGGTTATGAGCTGCGTCCACAGGATATTTTGTTGCCGGATTATGACGCCGCAACGGTAGCCGTGGGCGAAGATGCGATGGAAGGTTCGCTGGACGAAATCACCAGCCGTTTTGAACGCTCGGTATTAACCCAGCTTTATCGCAATTATCCCAGCACGCGCAAACTGGCAAAACGTCTCGGCGTTTCACATACCGCGATTGCCAATAAGTTGCGGGAATATGGTCTGAGTCAGAAGAAGAACGAAGAGTAA", - "dna_sequence_length": 1542, - "functions": [ - "aromatic amino acid biosynthesis and transport regulon transcriptional regulator", - "autorepressor", - "ATPase", - "phosphatase" - ], - "id": "CDS_1308", - "location": [ - [ - "NC_000913", - 1386720, - "+", - 1542 - ] - ], - "md5": "5703597cd184aea29b53a9bc8aef031e", - "parent_gene": "", - "protein_md5": "2d30e9c6a468d54a6af5c09e8e9ff6b1", - "protein_translation": "MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGRIYLNFAELEFESFSSLMAEIRRIAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKSKVDMANPASCQLFGQKLDRLRNHTAAQLINGFNFLRWLESEPQDSHNEHVVINGQNFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVEQAQKLAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELFGHAPEGKKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKNLVELVQKGMFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLAADLNTVLTRYAWPGNVRQLKNAIYRALTQLDGYELRPQDILLPDYDAATVAVGEDAMEGSLDEITSRFERSVLTQLYRNYPSTRKLAKRLGVSHTAIANKLREYGLSQKKNEE", - "protein_translation_length": 513, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1324" - ], - [ - "gene_synonym", - "ECK1320" - ], - [ - "gene_synonym", - "GI:16129285" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A862" - ], - [ - "gene_synonym", - "EcoGene:EG12672" - ], - [ - "gene_synonym", - "GeneID:945880" - ], - [ - "gene_synonym", - "ASAP:ABE-0004442" - ], - [ - "gene_synonym", - "JW1317" - ], - [ - "gene_synonym", - "yzzJ" - ], - [ - "gene_synonym", - "NP_415840.1" - ], - [ - "gene_synonym", - "tpx" - ] - ], - "dna_sequence": "ATGTCACAAACCGTTCATTTCCAGGGCAACCCGGTTACAGTCGCCAATTCCATCCCGCAGGCGGGTAGCAAAGCGCAGACTTTTACTCTCGTGGCAAAAGATCTGTCTGACGTCACCCTCGGTCAGTTTGCGGGTAAACGCAAAGTGCTGAACATTTTCCCGAGTATTGATACCGGTGTTTGCGCCGCATCAGTACGTAAGTTTAACCAACTGGCAACTGAGATCGACAACACCGTTGTGCTGTGTATCTCTGCCGATCTGCCGTTCGCCCAGTCTCGTTTCTGCGGCGCAGAAGGTCTGAACAACGTTATCACCCTCTCCACTTTCCGTAACGCTGAATTTCTGCAAGCTTACGGTGTGGCAATTGCTGATGGCCCACTGAAAGGTCTGGCAGCGCGTGCCGTTGTGGTTATTGACGAAAATGACAATGTGATTTTCAGCCAGCTGGTGGATGAAATCACCACCGAGCCGGATTACGAAGCAGCTCTGGCTGTACTGAAAGCATAA", - "dna_sequence_length": 507, - "functions": [ - "lipid hydroperoxide peroxidase" - ], - "id": "CDS_1309", - "location": [ - [ - "NC_000913", - 1388811, - "-", - 507 - ] - ], - "md5": "2779bc4e978bde19cd23e53c9649ef49", - "parent_gene": "", - "protein_md5": "01b386065c3f2d61e5463a7369bbc6c7", - "protein_translation": "MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLKA", - "protein_translation_length": 168, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1325" - ], - [ - "gene_synonym", - "GI:90111249" - ], - [ - "gene_synonym", - "ECK1321" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P51981" - ], - [ - "gene_synonym", - "EcoGene:EG13228" - ], - [ - "gene_synonym", - "ASAP:ABE-0004448" - ], - [ - "gene_synonym", - "GeneID:946013" - ], - [ - "gene_synonym", - "ycjG" - ], - [ - "gene_synonym", - "ycjH" - ], - [ - "gene_synonym", - "NP_415841.4" - ], - [ - "gene_synonym", - "JW1318" - ] - ], - "dna_sequence": "ATGAGAACCGTTAAGGTATTCGAGGAAGCCTGGCCCTTACATACCCCGTTTGTGATTGCCCGGGGAAGTCGCAGTGAAGCGCGCGTGGTGGTGGTTGAACTGGAAGAAGAGGGTATTAAAGGCACCGGCGAATGCACGCCGTATCCGCGTTATGGGGAAAGTGATGCCTCGGTAATGGCGCAAATTATGAGCGTCGTGCCGCAACTAGAGAAAGGGCTGACACGGGAGGAGTTGCAAAAAATTCTCCCTGCCGGCGCAGCACGTAATGCGCTGGATTGTGCATTGTGGGATCTGGCCGCGCGAAGACAGCAGCAATCGCTGGCTGATTTGATCGGCATAACGCTTCCCGAGACAGTTATCACTGCACAGACGGTTGTCATCGGTACGCCTGATCAGATGGCCAATAGTGCATCAACACTCTGGCAGGCAGGCGCGAAATTACTGAAAGTGAAGCTGGATAACCATCTTATCAGTGAGCGGATGGTGGCAATTCGCACAGCTGTGCCCGATGCGACGCTGATCGTTGATGCAAATGAATCCTGGCGTGCAGAAGGGTTGGCGGCGCGTTGCCAGCTATTGGCGGATTTAGGCGTTGCGATGCTTGAACAACCGCTTCCTGCGCAGGACGATGCGGCGCTGGAGAATTTTATTCATCCGTTGCCGATTTGTGCTGATGAAAGTTGTCATACTCGTAGCAATTTGAAGGCGCTGAAAGGGCGCTATGAGATGGTTAATATTAAGCTCGATAAAACCGGGGGTCTGACGGAAGCGCTGGCGCTGGCGACTGAAGCGCGTGCACAAGGTTTCAGTCTGATGCTGGGCTGCATGTTGTGTACCTCTCGTGCCATTAGCGCCGCTTTACCGCTGGTGCCGCAGGTCAGTTTCGCCGATCTTGACGGACCGACCTGGCTGGCGGTAGATGTGGAACCGGCGCTTCAGTTCACGACGGGCGAATTGCATCTTTAG", - "dna_sequence_length": 966, - "functions": [ - "L-Ala-D/L-Glu epimerase" - ], - "id": "CDS_1310", - "location": [ - [ - "NC_000913", - 1388930, - "+", - 966 - ] - ], - "md5": "fac56afc4193529839e5f26e87c8e579", - "parent_gene": "", - "protein_md5": "f088bde994e5710a9914fd9272acb316", - "protein_translation": "MRTVKVFEEAWPLHTPFVIARGSRSEARVVVVELEEEGIKGTGECTPYPRYGESDASVMAQIMSVVPQLEKGLTREELQKILPAGAARNALDCALWDLAARRQQQSLADLIGITLPETVITAQTVVIGTPDQMANSASTLWQAGAKLLKVKLDNHLISERMVAIRTAVPDATLIVDANESWRAEGLAARCQLLADLGVAMLEQPLPAQDDAALENFIHPLPICADESCHTRSNLKALKGRYEMVNIKLDKTGGLTEALALATEARAQGFSLMLGCMLCTSRAISAALPLVPQVSFADLDGPTWLAVDVEPALQFTTGELHL", - "protein_translation_length": 321, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1322" - ], - [ - "gene_synonym", - "b1326" - ], - [ - "gene_synonym", - "EcoGene:EG13906" - ], - [ - "gene_synonym", - "mpaA" - ], - [ - "gene_synonym", - "NP_415842.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0004450" - ], - [ - "gene_synonym", - "GI:226524711" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACV6" - ], - [ - "gene_synonym", - "GeneID:945969" - ], - [ - "gene_synonym", - "ycjI" - ], - [ - "gene_synonym", - "JW1319" - ] - ], - "dna_sequence": "ATGACCGTAACCCGCCCACGCGCCGAACGCGGCGCATTTCCGCCCGGAACAGAACATTACGGACGTTCATTATTGGGCGCGCCGTTAATCTGGTTTCCTGCCCCTGCAGCCAGCCGCGAAAGTGGTTTGATTCTGGCTGGCACTCACGGTGATGAAAACTCTTCGGTCGTCACGCTCTCCTGTGCTCTGCGGACGTTGACACCTTCTTTGCGCCGTCATCATGTGGTGCTGTGTGTGAATCCTGACGGCTGCCAGTTGGGGTTACGGGCCAATGCTAATGGTGTGGATTTAAACAGAAACTTTCCGGCGGCGAACTGGAAGGAAGGTGAAACCGTTTATCGCTGGAACAGCGCCGCTGAAGAACGCGATGTCGTATTACTGACAGGTGACAAACCTGGCTCCGAACCTGAAACCCAGGCGCTGTGCCAGCTTATACACCGCATTCAACCTGCCTGGGTGGTCTCATTCCACGATCCACTGGCCTGTATTGAAGATCCCAGACACAGCGAATTAGGCGAATGGCTGGCTCAGGCGTTTGAATTGCCTCTGGTAACCAGCGTCGGTTATGAAACGCCTGGCTCTTTCGGCAGTTGGTGTGCAGATCTGAACTTGCATTGCATCACCGCAGAGTTTCCGCCCATCTCCTCCGACGAAGCCAGCGAAAAATATCTCTTTGCGATGGCAAACTTGCTGCGCTGGCATCCTAAAGATGCAATTCGCCCGTCGTGA", - "dna_sequence_length": 729, - "functions": [ - "murein peptide amidase A" - ], - "id": "CDS_1311", - "location": [ - [ - "NC_000913", - 1390598, - "-", - 729 - ] - ], - "md5": "b2294063adedd6f2aed602d1fb4ec1e2", - "parent_gene": "", - "protein_md5": "0b4df7c8be0817a72aece9635c70217f", - "protein_translation": "MTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRESGLILAGTHGDENSSVVTLSCALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFPAANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRIQPAWVVSFHDPLACIEDPRHSELGEWLAQAFELPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDEASEKYLFAMANLLRWHPKDAIRPS", - "protein_translation_length": 242, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1323" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q2EER5" - ], - [ - "gene_synonym", - "b4525" - ], - [ - "gene_synonym", - "ASAP:ABE-0285046" - ], - [ - "gene_synonym", - "ymjC" - ], - [ - "gene_synonym", - "EcoGene:EG14420" - ], - [ - "gene_synonym", - "JW5960" - ], - [ - "gene_synonym", - "GeneID:1450258" - ] - ], - "dna_sequence": "ATGAAAAATGTACTGATTCTTGGTGCTGGCGGTCAGATAGCCCGCCATGTGATTAATCAACTGGCAGATAAGCAAACCATTAAACAAACTTTATTTGCCCGTCAGCCAGCAAAAATCCACAAACCCTATCCAACTAAT", - "dna_sequence_length": 138, - "id": "CDS_1312", - "location": [ - [ - "NC_000913", - 1390862, - "-", - 138 - ] - ], - "md5": "a1fac700236f64c486795741ee6b2483", - "parent_gene": "", - "protein_md5": "967433850d4926fb66b98e299e73558f", - "protein_translation": "MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTN", - "protein_translation_length": 46, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14478" - ], - [ - "gene_synonym", - "GeneID:7751617" - ], - [ - "gene_synonym", - "ymjD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CD93" - ], - [ - "gene_synonym", - "ECK4488" - ], - [ - "gene_synonym", - "b4673" - ] - ], - "dna_sequence": "ATGAAACATATTCAAATCCGCAATAGTGATATGGACTGGCATATTGCTGCCAATAATCTGGGATAA", - "dna_sequence_length": 66, - "id": "CDS_1313", - "location": [ - [ - "NC_000913", - 1390933, - "-", - 66 - ] - ], - "md5": "9b656fe262727702520ff898ebddfe07", - "parent_gene": "", - "protein_md5": "cc53a32bf34e0a3877491accc0c221a1", - "protein_translation": "MKHIQIRNSDMDWHIAANNLG", - "protein_translation_length": 21, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5804" - ], - [ - "gene_synonym", - "ASAP:ABE-0004453" - ], - [ - "gene_synonym", - "b1327" - ], - [ - "gene_synonym", - "EcoGene:EG13922" - ], - [ - "gene_synonym", - "GI:221800781" - ], - [ - "gene_synonym", - "ECK1324" - ], - [ - "gene_synonym", - "ycjY" - ], - [ - "gene_synonym", - "NP_415843.2" - ], - [ - "gene_synonym", - "GeneID:945988" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76049" - ] - ], - "dna_sequence": "ATGATGAATAATAAAGTCAGCTTCACTAACAGCAATAATCCAACCATCTCTTTGTCTGCAGTGATCTATTTCCCTCCAAAATTTGATGAAACCCGTCAGTATCAGGCAATTGTGTTATCTCACCCAGGTGGGGGCGTTAAAGAACAAACGGCCGGAACCTATGCCAAAAAACTGGCGGAAAAGGGATTTGTCACTATTGCTTATGACGCATCTTATCAAGGTGAAAGTGGCGGCGAGCCGCGTCAGTTAGAAAACCCATACATTCGTACTGAAGACATCAGTGCCGTGATTGATTACCTGACAACGCTTTCTTATGTCGACAATACCCGAATTGGTGCGATGGGAATTTGTGCCGGTGCAGGATATACAGCCAATGCTGCAATTCAGGATCGCCGCATCAAGGCCATCGGTACCGTTAGTGCGGTCAATATTGGTTCGATATTCCGTAATGGTTGGGAAAACAATGTGAAATCTATTGATGCCCTGCCATACGTTGAAGCGGGTTCAAACGCCAGAACCAGCGATATTAGCAGCGGAGAATACGCCATTATGCCACTGGCACCAATGAAGGAGTCCGATGCGCCGAACGAAGAACTGCGTCAGGCCTGGGAGTATTACCACACCCCTCGCGCGCAGTATCCAACAGCACCGGGTTACGCTACTTTGCGCAGCCTTAACCAGATTATTACCTATGATGCTTACCATATGGCGGAAGTGTACCTGACTCAGCCGACGCAGATTGTGGCGGGCAGCCAGGCAGGGAGCAAATGGATGAGTGACGACCTGTACGATCGAGCATCAAGCCAGGATAAACGCTATCACATTGTTGAAGGCGCAAACCATATGGATCTTTATGACGGCAAAGCCTATGTGGCTGAAGCAATTTCAGTATTAGCTCCGTTCTTTGAGGAAACTCTGTAA", - "dna_sequence_length": 921, - "functions": [ - "S9 homolog non-peptidase family protein" - ], - "id": "CDS_1314", - "location": [ - [ - "NC_000913", - 1391853, - "-", - 921 - ] - ], - "md5": "5d0a829d9b08dcec80f04a135ebbea47", - "parent_gene": "", - "protein_md5": "222f6dd5ad5b5e8fa96c4f4148da425e", - "protein_translation": "MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEPRQLENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSIFRNGWENNVKSIDALPYVEAGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVYLTQPTQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAPFFEETL", - "protein_translation_length": 306, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77333" - ], - [ - "gene_synonym", - "ASAP:ABE-0004457" - ], - [ - "gene_synonym", - "EcoGene:EG13923" - ], - [ - "gene_synonym", - "ECK1325" - ], - [ - "gene_synonym", - "JW1321" - ], - [ - "gene_synonym", - "GI:16129289" - ], - [ - "gene_synonym", - "b1328" - ], - [ - "gene_synonym", - "ycjZ" - ], - [ - "gene_synonym", - "pgrR" - ], - [ - "gene_synonym", - "GeneID:945930" - ], - [ - "gene_synonym", - "NP_415844.1" - ] - ], - "dna_sequence": "ATGAAGCGTGAAGAAATCGCTGATCTGATGGCGTTTGTCGTCGTTGCAGAGGAGCGTAGCTTCACTCGTGCAGCAGCCCGCCTGAGCATGGCGCAGTCAGCTTTAAGCCAGATAGTGCGTCGTATAGAAGAACGATTGGGATTGCGGCTTCTGACGCGAACCACGCGCAGCGTTGTTCCAACTGAAGCGGGCGAGCATCTTTTGTCTGTTCTTGGCCCTATGTTGCATGACATAGATTCAGCCATGGCATCCCTGAGCGATCTGCAGAACCGCCCATCCGGGACAATACGTATTACTACTGTAGAACATGCAGCAAAAACGATATTGTTACCAGCAATGCGCACATTCCTGAAATCGCATCCTGAAATTGATATTCAGCTCACCATTGATTATGGTTTGACCGATGTCGTTTCTGAACGTTTTGATGCAGGCGTCCGTCTGGGTGGGGAGATGGATAAAGATATGATCGCCATTCGAATCGGGCCAGATATACCAATGGCTATTGTTGGCTCACCGGATTATTTTTCTCGCCGAAGTGTTCCAACGTCAGTGTCACAATTAATAGATCATCAGGCAATTAATTTGTATCTTCCCACATCGGGTACAGCAAATCGCTGGAGATTAATACGCGGTGGACGTGAAGTTCGTGTTCGCATGGAAGGTCAGCTTTTACTGAATACGATAGACCTGATCATTGATGCTGCAATTGATGGGCATGGATTGGCGTATCTACCTTATGATCAGGTTGAGCGGGCTATTAAAGAAAAAAAACTGATACGTGTTTTGGATAAATTCACACCAGATTTACCCGGTTATCACCTGTACTATCCACACCGTCGACATGCTGGCTCGGCATTCTCATTATTTATAGATAGGCTGAAGTATAAAGGTGCTGTTTAG", - "dna_sequence_length": 900, - "functions": [ - "murein peptide degradation regulator" - ], - "id": "CDS_1315", - "location": [ - [ - "NC_000913", - 1391991, - "+", - 900 - ] - ], - "md5": "711f0c4086750068dd3f2b37792b28f1", - "parent_gene": "", - "protein_md5": "35e42455de2c2a1e98cd2244438c9b2e", - "protein_translation": "MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEERLGLRLLTRTTRSVVPTEAGEHLLSVLGPMLHDIDSAMASLSDLQNRPSGTIRITTVEHAAKTILLPAMRTFLKSHPEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRIGPDIPMAIVGSPDYFSRRSVPTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVRMEGQLLLNTIDLIIDAAIDGHGLAYLPYDQVERAIKEKKLIRVLDKFTPDLPGYHLYYPHRRHAGSAFSLFIDRLKYKGAV", - "protein_translation_length": 299, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1326" - ], - [ - "gene_synonym", - "ASAP:ABE-0004460" - ], - [ - "gene_synonym", - "ynaH" - ], - [ - "gene_synonym", - "GeneID:945951" - ], - [ - "gene_synonym", - "JW1322" - ], - [ - "gene_synonym", - "b1329" - ], - [ - "gene_synonym", - "GI:90111250" - ], - [ - "gene_synonym", - "NP_415845.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77348" - ], - [ - "gene_synonym", - "mppA" - ], - [ - "gene_synonym", - "EcoGene:EG13376" - ] - ], - "dna_sequence": "ATGAAGCACTCTGTTTCAGTCACGTGTTGTGCGCTGTTGGTCAGCAGCATTTCTCTTTCGTATGCTGCAGAAGTTCCGAGCGGCACAGTACTGGCAGAGAAGCAGGAGCTGGTGCGCCACATTAAAGATGAGCCTGCGTCGCTGGATCCCGCTAAAGCCGTGGGCCTGCCAGAGATTCAGGTCATTCGCGATCTGTTTGAAGGTCTGGTGAATCAGAACGAAAAAGGGGAGATTGTCCCCGGCGTTGCGACTCAGTGGAAAAGTAATGACAACCGTATCTGGACTTTTACCCTGCGCGATAACGCAAAATGGGCGGATGGCACACCGGTAACGGCGCAAGATTTTGTCTACAGCTGGCAACGTCTGGTGGACCCAAAAACATTGTCGCCATTTGCATGGTTTGCCGCGCTGGCGGGAATCAACAACGCACAGGCGATTATTGATGGTAAAGCTACGCCTGACCAGCTTGGCGTCACCGCAGTTGATGCCCATACTTTGAAAATTCAGCTTGATAAACCGTTGCCGTGGTTTGTGAATTTAACCGCTAACTTTGCCTTCTTCCCGGTGCAAAAAGCCAACGTAGAAAGCGGTAAAGAGTGGACGAAACCCGGAAATCTGATCGGCAATGGCGCTTATGTTCTTAAAGAGCGCGTAGTCAATGAAAAACTGGTCGTGGTACCGAATACCCATTATTGGGATAACGCCAAAACGGTACTGCAAAAAGTGACCTTCCTGCCAATTAATCAGGAATCCGCAGCCACTAAGCGTTACCTCGCGGGGGATATTGATATCACCGAATCCTTCCCGAAAAATATGTATCAGAAGCTGTTGAAGGATATTCCGGGGCAGGTTTATACGCCGCCGCAGCTCGGGACCTATTATTATGCGTTTAACACGCAAAAAGGGCCGACGGCAGATCAGCGCGTTCGTCTGGCATTAAGTATGACGATAGATCGCCGCCTGATGACCGAAAAAGTATTAGGGACGGGCGAAAAGCCAGCGTGGCATTTTACACCAGATGTTACCGCGGGATTTACGCCGGAACCTTCGCCGTTTGAACAAATGAGTCAGGAAGAACTGAATGCGCAGGCAAAAACTTTGTTGAGCGCAGCTGGTTATGGTCCGCAAAAACCGCTGAAGCTGACGCTTTTGTATAACACTTCAGAAAACCATCAAAAAATTGCGATTGCTGTAGCATCGATGTGGAAAAAGAACCTTGGCGTAGATGTTAAATTGCAAAATCAGGAATGGAAAACCTATATCGATAGCCGTAACACCGGCAATTTTGATGTTATCCGCGCCTCGTGGGTGGGGGATTATAATGAACCCTCCACTTTCCTGACATTATTAACGTCAACGCATTCAGGAAATATTTCACGCTTTAACAATCCGGCATATGACAAAGTTCTGGCCCAGGCATCGACGGAAAATACCGTTAAAGCGCGTAATGCCGATTACAACGCGGCAGAAAAAATCCTCATGGAGCAAGCACCGATTGCACCAATTTATCAATATACCAATGGACGATTAATCAAGCCGTGGCTGAAAGGTTATCCCATTAATAATCCTGAAGATGTGGCGTACAGTCGGACTATGTATATTGTGAAGCATTGA", - "dna_sequence_length": 1614, - "functions": [ - "murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit" - ], - "id": "CDS_1316", - "location": [ - [ - "NC_000913", - 1393227, - "+", - 1614 - ] - ], - "md5": "e3ec326b22ce27c325ec538dfa20294b", - "parent_gene": "", - "protein_md5": "18783cf6b9c22b11ef751edeeb77a36d", - "protein_translation": "MKHSVSVTCCALLVSSISLSYAAEVPSGTVLAEKQELVRHIKDEPASLDPAKAVGLPEIQVIRDLFEGLVNQNEKGEIVPGVATQWKSNDNRIWTFTLRDNAKWADGTPVTAQDFVYSWQRLVDPKTLSPFAWFAALAGINNAQAIIDGKATPDQLGVTAVDAHTLKIQLDKPLPWFVNLTANFAFFPVQKANVESGKEWTKPGNLIGNGAYVLKERVVNEKLVVVPNTHYWDNAKTVLQKVTFLPINQESAATKRYLAGDIDITESFPKNMYQKLLKDIPGQVYTPPQLGTYYYAFNTQKGPTADQRVRLALSMTIDRRLMTEKVLGTGEKPAWHFTPDVTAGFTPEPSPFEQMSQEELNAQAKTLLSAAGYGPQKPLKLTLLYNTSENHQKIAIAVASMWKKNLGVDVKLQNQEWKTYIDSRNTGNFDVIRASWVGDYNEPSTFLTLLTSTHSGNISRFNNPAYDKVLAQASTENTVKARNADYNAAEKILMEQAPIAPIYQYTNGRLIKPWLKGYPINNPEDVAYSRTMYIVKH", - "protein_translation_length": 537, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129291" - ], - [ - "gene_synonym", - "ASAP:ABE-0004462" - ], - [ - "gene_synonym", - "ECK1327" - ], - [ - "gene_synonym", - "b1330" - ], - [ - "gene_synonym", - "ynaI" - ], - [ - "gene_synonym", - "GeneID:945898" - ], - [ - "gene_synonym", - "JW1323" - ], - [ - "gene_synonym", - "NP_415846.1" - ], - [ - "gene_synonym", - "EcoGene:EG13924" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEB5" - ] - ], - "dna_sequence": "ATGATCGCTGAACTGTTTACAAATAATGCGCTTAATCTGGTCATTATTTTCGGTAGCTGCGCAGCATTGATTCTGATGAGCTTTTGGTTTCGCCGTGGAAATCGTAAAAGAAAAGGATTTTTATTCCATGCGGTGCAATTTTTAATCTACACCATAATTATCAGTGCTGTTGGTAGCATTATTAATTATGTTATAGAAAACTATAAACTCAAATTTATCACCCCAGGCGTTATCGATTTTATCTGTACGTCCCTGATTGCGGTTATTCTGACGATTAAGCTATTTCTGCTGATTAATCAGTTTGAAAAACAGCAGATTAAAAAAGGTCGCGATATCACCAGTGCGCGGATTATGTCGCGTATCATCAAAATCACCATTATTGTGGTGCTTGTTCTGCTTTATGGCGAACATTTCGGCATGAGCCTTTCTGGCTTGCTGACCTTTGGTGGTATTGGTGGTCTGGCTGTCGGTATGGCCGGTAAAGATATTCTGAGTAACTTCTTTTCCGGGATTATGCTCTATTTCGACCGTCCTTTCAGTATTGGCGACTGGATCCGTTCACCGGACAGAAATATCGAAGGTACAGTAGCGGAAATTGGCTGGCGAATTACCAAAATTACGACCTTTGATAATCGTCCATTGTACGTACCGAACTCGCTGTTTTCGTCGATCAGCGTAGAAAACCCAGGACGAATGACCAACCGCCGCATTACCACGACCATTGGTTTACGTTATGAGGATGCGGCAAAAGTGGGCGTTATTGTCGAAGCTGTACGTGAGATGCTGAAAAATCACCCGGCCATCGACCAGCGACAAACCTTACTGGTTTATTTCAACCAGTTTGCTGACTCTTCATTGAATATTATGGTTTATTGCTTTACCAAAACCACGGTATGGGCTGAATGGCTTGCTGCACAGCAAGACGTTTATTTGAAGATTATCGATATTGTACAGTCACACGGCGCGGACTTTGCCTTCCCCAGCCAGACGCTGTATATGGATAACATTACACCGCCGGAACAGGGTCGCTAA", - "dna_sequence_length": 1032, - "functions": [ - "mechanosensitive channel protein, very small conductance" - ], - "id": "CDS_1317", - "location": [ - [ - "NC_000913", - 1395922, - "-", - 1032 - ] - ], - "md5": "4994a00c580b1ed04457897bee257e17", - "parent_gene": "", - "protein_md5": "d4a403dcc47818d890ad52fb39fd443f", - "protein_translation": "MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHAVQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFEKQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAGKDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPNSLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLVYFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMDNITPPEQGR", - "protein_translation_length": 343, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415847.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004467" - ], - [ - "gene_synonym", - "EcoGene:EG40008" - ], - [ - "gene_synonym", - "GeneID:945896" - ], - [ - "gene_synonym", - "GI:16129292" - ], - [ - "gene_synonym", - "b1331" - ], - [ - "gene_synonym", - "insH1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CE52" - ], - [ - "gene_synonym", - "ECK0261" - ] - ], - "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", - "dna_sequence_length": 1017, - "functions": [ - "IS5 transposase and trans-activator" - ], - "id": "CDS_1318", - "location": [ - [ - "NC_000913", - 1396076, - "+", - 1017 - ] - ], - "md5": "59571096a52db4971db033e04651ef59", - "parent_gene": "", - "protein_md5": "75d20978a034ac97cbf88235b32b7ad9", - "protein_translation": "MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", - "protein_translation_length": 338, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129293" - ], - [ - "gene_synonym", - "NP_415848.1" - ], - [ - "gene_synonym", - "b1332" - ], - [ - "gene_synonym", - "EcoGene:EG14294" - ], - [ - "gene_synonym", - "ASAP:ABE-0004470" - ], - [ - "gene_synonym", - "ECK1328" - ], - [ - "gene_synonym", - "JW1326" - ], - [ - "gene_synonym", - "GeneID:945901" - ], - [ - "gene_synonym", - "ynaJ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64445" - ] - ], - "dna_sequence": "ATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATCGGCGGCGTTATAGAACAGTACAATATTCCGCTGTCTGAGTGGACGACATCAATGTATGTGATTCAGTCATCGATGATTTTTGTTTATAGCCTGGTCTTTACTGTGTTGCTGGCAATCCCGTTGGGAATTTATTTCCTTGGCGGCGAAGAGCAGTAA", - "dna_sequence_length": 258, - "functions": [ - "DUF2534 family putative inner membrane protein" - ], - "id": "CDS_1319", - "location": [ - [ - "NC_000913", - 1397365, - "+", - 258 - ] - ], - "md5": "6fe9f666c20035136407df620e54ef07", - "parent_gene": "", - "protein_md5": "d0872fdca7764c1ba04cb966bae40205", - "protein_translation": "MIMAKLKSAKGKKFLFGLLAVFIIAASVVTRATIGGVIEQYNIPLSEWTTSMYVIQSSMIFVYSLVFTVLLAIPLGIYFLGGEEQ", - "protein_translation_length": 85, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ydaA" - ], - [ - "gene_synonym", - "ASAP:ABE-0004472" - ], - [ - "gene_synonym", - "b1333" - ], - [ - "gene_synonym", - "NP_415849.1" - ], - [ - "gene_synonym", - "GI:16129294" - ], - [ - "gene_synonym", - "ECK1329" - ], - [ - "gene_synonym", - "JW1327" - ], - [ - "gene_synonym", - "GeneID:945904" - ], - [ - "gene_synonym", - "EcoGene:EG11246" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAC0" - ], - [ - "gene_synonym", - "uspE" - ] - ], - "dna_sequence": "ATGGCTATGTATCAGAACATGCTCGTTGTTATCGATCCTAACCAGGACGACCAACCAGCATTGCGGCGAGCTGTTTATTTACATCAACGGATTGGTGGCAAAATTAAAGCCTTTTTGCCGATCTATGACTTCTCATACGAAATGACCACCCTGCTCTCCCCGGACGAACGTACCGCTATGCGTCAGGGCGTCATCAGCCAGCGTACAGCCTGGATCCACGAGCAGGCAAAATATTATCTCAATGCTGGCGTTCCCATTGAAATTAAAGTGGTCTGGCATAACCGTCCTTTCGAAGCCATCATTCAGGAAGTGATCAGCGGCGGACACGATTTGGTGCTAAAAATGGCGCACCAACATGACCGTCTGGAAGCGGTGATTTTTACGCCAACGGACTGGCATCTGTTACGCAAATGCCCAAGCCCGGTGTGGATGGTGAAAGACCAGCCGTGGCCGGAAGGAGGCAAGGCGCTGGTGGCGGTGAATCTCGCCAGTGAAGAGCCGTATCATAATGCGCTCAATGAAAAACTGGTCAAAGAGACGATCGAACTGGCAGAACAAGTCAACCATACCGAAGTTCATCTGGTTGGCGCTTATCCGGTAACGCCAATTAATATCGCGATTGAACTGCCGGAATTTGACCCGAGCGTTTATAACGATGCCATTCGTGGGCAACATTTGCTGGCAATGAAAGCCCTGCGGCAGAAATTCGGCATTAATGAAAACATGACGCACGTAGAAAAAGGTCTGCCAGAAGAGGTGATTCCTGATTTGGCGGAGCACTTACAGGCGGGGATTGTGGTTCTGGGCACGGTAGGACGCACCGGTATTTCAGCAGCATTCCTCGGCAACACGGCGGAACAGGTGATTGATCATCTTCGCTGCGACCTGCTGGTCATTAAACCTGACCAGTATCAGACACCCGTTGAACTGGATGACGAAGAAGACGATTAA", - "dna_sequence_length": 951, - "functions": [ - "stress-induced protein" - ], - "id": "CDS_1320", - "location": [ - [ - "NC_000913", - 1398622, - "-", - 951 - ] - ], - "md5": "ba6664e5485173b56e34a6e76fd5d4e0", - "parent_gene": "", - "protein_md5": "716e68a97fbca16b35ec7ff2a5d22076", - "protein_translation": "MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDFSYEMTTLLSPDERTAMRQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHNRPFEAIIQEVISGGHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAVNLASEEPYHNALNEKLVKETIELAEQVNHTEVHLVGAYPVTPINIAIELPEFDPSVYNDAIRGQHLLAMKALRQKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGISAAFLGNTAEQVIDHLRCDLLVIKPDQYQTPVELDDEEDD", - "protein_translation_length": 316, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1328" - ], - [ - "gene_synonym", - "b1334" - ], - [ - "gene_synonym", - "fnr" - ], - [ - "gene_synonym", - "GI:16129295" - ], - [ - "gene_synonym", - "nirR" - ], - [ - "gene_synonym", - "EcoGene:EG10325" - ], - [ - "gene_synonym", - "ASAP:ABE-0004475" - ], - [ - "gene_synonym", - "NP_415850.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9E5" - ], - [ - "gene_synonym", - "nirA" - ], - [ - "gene_synonym", - "GeneID:945908" - ], - [ - "gene_synonym", - "ossA" - ], - [ - "gene_synonym", - "ECK1330" - ] - ], - "dna_sequence": "ATGATCCCGGAAAAGCGAATTATACGGCGCATTCAGTCTGGCGGTTGTGCTATCCATTGCCAGGATTGCAGCATCAGCCAGCTTTGCATCCCGTTCACACTCAACGAACATGAGCTTGATCAGCTTGATAATATCATTGAGCGGAAGAAGCCTATTCAGAAAGGCCAGACGCTGTTTAAGGCTGGTGATGAACTTAAATCGCTTTATGCCATCCGCTCCGGTACGATTAAAAGTTATACCATCACTGAGCAAGGCGACGAGCAAATCACTGGTTTCCATTTAGCAGGCGACCTGGTGGGATTTGACGCCATCGGCAGCGGCCATCACCCGAGCTTCGCGCAGGCGCTGGAAACCTCGATGGTATGTGAAATCCCGTTCGAAACGCTGGACGATTTGTCCGGTAAAATGCCGAATCTGCGTCAGCAGATGATGCGTCTGATGAGCGGTGAAATCAAAGGCGATCAGGACATGATCCTGCTGTTGTCGAAGAAAAATGCCGAGGAACGTCTGGCTGCATTCATCTACAACCTGTCCCGTCGTTTTGCCCAACGCGGCTTCTCCCCTCGTGAATTCCGCCTGACGATGACTCGTGGCGATATCGGTAACTATCTGGGCCTGACGGTAGAAACCATCAGCCGTCTGCTGGGTCGCTTCCAGAAAAGCGGCATGCTGGCAGTCAAAGGTAAATACATCACCATCGAAAATAACGATGCGCTGGCCCAGCTTGCTGGTCATACGCGTAACGTTGCCTGA", - "dna_sequence_length": 753, - "functions": [ - "oxygen-sensing anaerobic growth regulon transcriptional regulator FNR", - "autorepressor" - ], - "id": "CDS_1321", - "location": [ - [ - "NC_000913", - 1399526, - "-", - 753 - ] - ], - "md5": "1d20f7f68b44c59835cb058b1f5fed45", - "parent_gene": "", - "protein_md5": "1292da009aa32cef15c5f4f65ad64f77", - "protein_translation": "MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNVA", - "protein_translation_length": 250, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1329" - ], - [ - "gene_synonym", - "EcoGene:EG10668" - ], - [ - "gene_synonym", - "ASAP:ABE-0004486" - ], - [ - "gene_synonym", - "b1335" - ], - [ - "gene_synonym", - "ECK1331" - ], - [ - "gene_synonym", - "GI:16129296" - ], - [ - "gene_synonym", - "GeneID:945853" - ], - [ - "gene_synonym", - "ogt" - ], - [ - "gene_synonym", - "NP_415851.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFH0" - ] - ], - "dna_sequence": "ATGCTGAGATTACTTGAAGAAAAAATTGCCACGCCACTGGGTCCACTGTGGGTGATTTGCGATGAGCAATTTCGCCTGCGGGCGGTTGAATGGGAAGAGTACAGCGAACGCATGGTGCAGCTGCTGGACATCCATTATCGCAAAGAAGGCTATGAGCGCATTTCTGCCACCAATCCAGGCGGTTTAAGCGACAAGCTTCGTGAATATTTTGCCGGTAATCTTAGCATTATTGATACGCTTCCCACTGCTACGGGGGGGACGCCATTTCAGCGCGAAGTCTGGAAAACACTACGCACTATCCCCTGCGGGCAGGTAATGCATTACGGCCAACTGGCTGAGCAATTGGGCCGTCCTGGCGCGGCGCGTGCCGTTGGTGCGGCAAACGGATCGAATCCCATCAGCATCGTCGTACCTTGCCATCGGGTTATTGGCCGAAACGGCACCATGACCGGATATGCAGGCGGAGTTCAGCGAAAAGAGTGGTTATTGCGCCATGAAGGTTATCTTTTGCTGTAA", - "dna_sequence_length": 516, - "functions": [ - "O-6-alkylguanine-DNA:cysteine-protein methyltransferase" - ], - "id": "CDS_1322", - "location": [ - [ - "NC_000913", - 1400236, - "-", - 516 - ] - ], - "md5": "8342661c0ec2403517399eb0bc689de4", - "parent_gene": "", - "protein_md5": "6d46c043ac26f96f870efc1c8a95e57c", - "protein_translation": "MLRLLEEKIATPLGPLWVICDEQFRLRAVEWEEYSERMVQLLDIHYRKEGYERISATNPGGLSDKLREYFAGNLSIIDTLPTATGGTPFQREVWKTLRTIPCGQVMHYGQLAEQLGRPGAARAVGAANGSNPISIVVPCHRVIGRNGTMTGYAGGVQRKEWLLRHEGYLLL", - "protein_translation_length": 171, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1336" - ], - [ - "gene_synonym", - "ECK1332" - ], - [ - "gene_synonym", - "ydaH" - ], - [ - "gene_synonym", - "EcoGene:EG12853" - ], - [ - "gene_synonym", - "ASAP:ABE-0004488" - ], - [ - "gene_synonym", - "GI:90111251" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46133" - ], - [ - "gene_synonym", - "GeneID:945912" - ], - [ - "gene_synonym", - "JW5822" - ], - [ - "gene_synonym", - "abgT" - ], - [ - "gene_synonym", - "NP_415852.2" - ] - ], - "dna_sequence": "ATGAGTATGTCATCCATACCGTCGTCCTCCCAATCCGGGAAGCTCTATGGCTGGGTCGAAAGAATTGGTAACAAGGTTCCCCATCCTTTTCTGCTCTTTATCTATTTGATTATCGTACTCATGGTGACGACGGCAATTTTGTCGGCCTTTGGCGTCAGTGCGAAAAACCCGACCGATGGTACGCCGGTCGTGGTGAAAAACCTGCTCAGTGTGGAAGGATTACACTGGTTTTTACCCAATGTTATTAAAAACTTTAGCGGTTTTGCTCCACTTGGTGCGATCCTGGCGCTGGTTTTAGGTGCCGGTCTGGCGGAGCGCGTCGGCTTACTGCCAGCACTAATGGTTAAAATGGCATCGCATGTTAATGCCCGCTACGCCAGTTATATGGTGCTGTTTATTGCTTTTTTCAGCCACATTTCTTCCGATGCGGCGTTAGTGATCATGCCACCGATGGGTGCGCTGATTTTTCTGGCGGTGGGCAGGCATCCAGTTGCAGGTTTACTGGCTGCCATTGCAGGCGTAGGTTGCGGCTTTACGGCTAATTTACTGATTGTCACAACCGACGTGTTGCTGTCGGGGATCAGCACGGAAGCGGCAGCTGCGTTCAATCCGCAAATGCACGTCAGTGTAATTGATAACTGGTATTTTATGGCCAGCTCCGTAGTCGTACTGACGATTGTTGGCGGCCTGATAACCGACAAAATCATCGAGCCACGGTTAGGTCAATGGCAGGGAAACAGCGATGAGAAACTGCAGACATTGACCGAAAGTCAGCGTTTTGGTTTACGCATAGCAGGTGTCGTATCGCTACTTTTTATTGCTGCGATTGCGCTGATGGTGATCCCGCAAAACGGGATATTGCGCGATCCGATTAATCACACCGTGATGCCATCACCCTTTATTAAAGGTATCGTGCCACTGATCATTCTTTTTTTCTTTGTTGTCTCGCTGGCTTATGGCATCGCTACCCGCACAATTCGACGTCAGGCGGATTTACCGCATTTAATGATTGAACCGATGAAAGAGATGGCGGGATTTATCGTGATGGTTTTTCCCCTCGCCCAATTTGTCGCCATGTTTAACTGGAGCAACATGGGGAAATTCATCGCCGTGGGGCTGACCGATATACTGGAAAGTTCAGGGCTTAGCGGCATCCCGGCGTTTGTCGGTCTGGCGTTGCTTTCCTCTTTCTTATGCATGTTTATTGCCAGCGGTTCCGCAATCTGGTCGATTCTCGCCCCCATTTTCGTACCAATGTTTATGCTACTTGGCTTTCACCCGGCATTTGCGCAAATCCTCTTTCGTATTGCCGACTCATCCGTATTGCCTTTAGCGCCGGTATCTCCTTTTGTTCCACTGTTTCTTGGATTCCTGCAACGCTACAAACCAGACGCGAAACTGGGTACTTACTATTCGTTAGTCTTGCCCTATCCACTTATCTTTTTGGTGGTATGGCTGCTGATGTTGCTGGCGTGGTATCTTGTCGGTCTGCCGATAGGTCCGGGTATTTACCCACGTTTGTCTTAA", - "dna_sequence_length": 1527, - "functions": [ - "p-aminobenzoyl-glutamate transporter", - "membrane protein" - ], - "id": "CDS_1323", - "location": [ - [ - "NC_000913", - 1401773, - "-", - 1527 - ] - ], - "md5": "794b776e73f3fd823f64d53372bcb3e2", - "parent_gene": "", - "protein_md5": "702ff14c6b727508646102b0358f94ca", - "protein_translation": "MSMSSIPSSSQSGKLYGWVERIGNKVPHPFLLFIYLIIVLMVTTAILSAFGVSAKNPTDGTPVVVKNLLSVEGLHWFLPNVIKNFSGFAPLGAILALVLGAGLAERVGLLPALMVKMASHVNARYASYMVLFIAFFSHISSDAALVIMPPMGALIFLAVGRHPVAGLLAAIAGVGCGFTANLLIVTTDVLLSGISTEAAAAFNPQMHVSVIDNWYFMASSVVVLTIVGGLITDKIIEPRLGQWQGNSDEKLQTLTESQRFGLRIAGVVSLLFIAAIALMVIPQNGILRDPINHTVMPSPFIKGIVPLIILFFFVVSLAYGIATRTIRRQADLPHLMIEPMKEMAGFIVMVFPLAQFVAMFNWSNMGKFIAVGLTDILESSGLSGIPAFVGLALLSSFLCMFIASGSAIWSILAPIFVPMFMLLGFHPAFAQILFRIADSSVLPLAPVSPFVPLFLGFLQRYKPDAKLGTYYSLVLPYPLIFLVVWLLMLLAWYLVGLPIGPGIYPRLS", - "protein_translation_length": 508, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1337" - ], - [ - "gene_synonym", - "GI:16129298" - ], - [ - "gene_synonym", - "ASAP:ABE-0004491" - ], - [ - "gene_synonym", - "ECK1333" - ], - [ - "gene_synonym", - "ydaI" - ], - [ - "gene_synonym", - "abgB" - ], - [ - "gene_synonym", - "JW1331" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76052" - ], - [ - "gene_synonym", - "GeneID:945950" - ], - [ - "gene_synonym", - "NP_415853.1" - ], - [ - "gene_synonym", - "EcoGene:EG13351" - ] - ], - "dna_sequence": "ATGCAGGAAATCTATCGTTTTATCGACGATGCGATTGAAGCCGATCGCCAACGTTATACCGATATTGCCGATCAAATCTGGGATCATCCAGAAACACGTTTTGAAGAGTTCTGGTCAGCGGAGCATCTGGCTTCGGCGCTGGAATCTGCAGGCTTCACCGTTACCCGCAACGTAGGCAATATCCCAAATGCCTTTATTGCTTCGTTTGGTCAAGGCAAACCGGTTATCGCCCTGCTGGGAGAATATGACGCCCTGGCAGGTTTAAGTCAGCAAGCAGGTTGCGCGCAACCTACATCCGTGACGCCCGGTGAAAATGGTCACGGTTGCGGACACAATTTGCTGGGAACCGCCGCCTTTGCCGCTGCAATAGCCGTCAAGAAATGGCTGGAACAATATGGGCAAGGCGGCACGGTGCGCTTTTATGGTTGTCCTGGCGAAGAAGGCGGCTCGGGTAAAACGTTCATGGTTCGCGAGGGGGTATTTGATGATGTGGATGCGGCACTCACCTGGCACCCGGAAGCCTTTGCCGGTATGTTCAATACCCGCACGCTGGCAAACATTCAGGCATCATGGCGCTTTAAAGGGATCGCAGCACATGCCGCGAATTCCCCTCATTTGGGACGCAGCGCCCTTGATGCCGTAACGTTGATGACCACTGGCACCAACTTCCTCAACGAACATATTATTGAAAAAGCGCGCGTACACTATGCCATCACAAATAGCGGCGGGATCTCGCCCAACGTGGTCCAGGCGCAGGCAGAAGTGCTTTATCTTATCCGCGCCCCCGAAATGACCGACGTGCAGCATATTTATGATCGGGTCGCCAAAATCGCCGAAGGTGCGGCATTGATGACCGAAACCACGGTTGAATGCCGCTTCGACAAAGCCTGTTCCAGTTATCTCCCGAATCGCACCTTAGAAAATGCCATGTACCAGGCCCTATCCCATTTTGGTACCCCGGAATGGAACTCCGAAGAACTGGCTTTTGCGAAACAAATTCAGGCTACGCTCACCTCCAACGATCGGCAAAACAGTCTGAATAATATCGCCGCAACCGGTGGCGAAAACGGCAAGGTTTTTGCACTACGTCATCGTGAAACGGTACTGGCGAATGAAGTCGCTCCATATGCCGCCACCGATAACGTGCTTGCGGCATCGACTGATGTCGGCGACGTCAGTTGGAAACTGCCTGTTGCCCAGTGTTTCAGCCCCTGTTTTGCCGTCGGTACACCGCTACATACGTGGCAACTGGTTAGCCAGGGGCGAACATCTATTGCTCATAAAGGAATGCTGCTGGCGGCGAAAACTATGGCAGCAACCACAGTCAATCTCTTCCTTGATTCAGGGCTATTGCAAGAATGCCAACAAGAGCATCAGCAAGTAACGGACACGCAACCGTATCACTGCCCTATCCCGAAAAACGTGACACCGTCACCTTTAAAATAA", - "dna_sequence_length": 1446, - "functions": [ - "p-aminobenzoyl-glutamate hydrolase, B subunit" - ], - "id": "CDS_1324", - "location": [ - [ - "NC_000913", - 1403255, - "-", - 1446 - ] - ], - "md5": "c638bb535f3a5acec2826a59ffe3c14a", - "parent_gene": "", - "protein_md5": "4d95e6661f6091988b6c68ec0ddb6b67", - "protein_translation": "MQEIYRFIDDAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLASALESAGFTVTRNVGNIPNAFIASFGQGKPVIALLGEYDALAGLSQQAGCAQPTSVTPGENGHGCGHNLLGTAAFAAAIAVKKWLEQYGQGGTVRFYGCPGEEGGSGKTFMVREGVFDDVDAALTWHPEAFAGMFNTRTLANIQASWRFKGIAAHAANSPHLGRSALDAVTLMTTGTNFLNEHIIEKARVHYAITNSGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAKIAEGAALMTETTVECRFDKACSSYLPNRTLENAMYQALSHFGTPEWNSEELAFAKQIQATLTSNDRQNSLNNIAATGGENGKVFALRHRETVLANEVAPYAATDNVLAASTDVGDVSWKLPVAQCFSPCFAVGTPLHTWQLVSQGRTSIAHKGMLLAAKTMAATTVNLFLDSGLLQECQQEHQQVTDTQPYHCPIPKNVTPSPLK", - "protein_translation_length": 481, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1334" - ], - [ - "gene_synonym", - "ASAP:ABE-0004493" - ], - [ - "gene_synonym", - "NP_415854.4" - ], - [ - "gene_synonym", - "GeneID:945742" - ], - [ - "gene_synonym", - "abgA" - ], - [ - "gene_synonym", - "ydaJ" - ], - [ - "gene_synonym", - "GI:90111252" - ], - [ - "gene_synonym", - "b1338" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77357" - ], - [ - "gene_synonym", - "JW5205" - ], - [ - "gene_synonym", - "EcoGene:EG13352" - ] - ], - "dna_sequence": "ATGGAGTCTTTGAATCAATTTGTTAATTCGCTTGCCCCAAAATTATCGCACTGGCGACGTGATTTTCATCACTATGCAGAGTCTGGCTGGGTGGAATTCCGCACTGCCACCCTTGTTGCGGAAGAATTGCACCAGCTCGGCTATTCACTGGCGCTGGGTCGCGAAGTAGTTAATGAAAGTAGCCGGATGGGATTACCTGATGAATTCACTCTACAACGCGAATTCGAGCGCGCTCGTCAACAGGGTGCGCTAGCACAATGGATTGCGGCTTTTGAAGGTGGTTTCACTGGTATCGTCGCCACCCTGGATACCGGTCGCCCCGGTCCGGTGATGGCTTTCCGTGTCGATATGGACGCGCTGGATCTCAGTGAAGAGCAGGATGTCAGCCATCGCCCCTACCGCGACGGTTTTGCGTCATGTAACGCCGGAATGATGCATGCCTGTGGTCATGATGGACATACCGCCATTGGGCTTGGGCTGGCGCATACCCTTAAACAGTTCGAGTCCGGACTACATGGCGTCATCAAACTGATTTTTCAGCCTGCAGAGGAAGGTACGCGTGGCGCGCGGGCGATGGTCGATGCAGGTGTCGTAGATGATGTTGATTATTTTACTGCCGTGCACATTGGCACTGGCGTACCTGCGGGCACCGTGGTGTGCGGCAGTGATAATTTTATGGCAACCACCAAATTTGACGCGCACTTCACCGGTACCGCCGCTCACGCAGGCGCAAAACCAGAAGACGGTCACAATGCCTTGTTGGCGGCAGCACAAGCCACTCTTGCACTGCATGCAATCGCCCCGCACAGCGAAGGAGCTTCCAGAGTAAACGTGGGCGTTATGCAGGCAGGAAGCGGTCGTAACGTTGTTCCTGCCTCGGCGTTGCTGAAAGTGGAAACACGCGGGGCCAGCGACGTCATTAATCAATATGTTTTTGACCGTGCACAACAAGCGATTCAGGGCGCAGCAACCATGTATGGTGTCGGCGTTGAAACTCGTCTGATGGGTGCAGCTACCGCCAGTTCTCCTTCGCCGCAATGGGTCGCATGGTTGCAAAGTCAGGCGGCTCAGGTCGCGGGGGTCAATCAGGCCATTGAACGTGTTGAAGCGCCTGCGGGTTCCGAAGATGCCACATTAATGATGGCCCGCGTGCAGCAACATCAAGGGCAAGCCTCCTACGTGGTGTTTGGCACACAGCTGGCGGCAGGTCATCACAACGAAAAATTCGATTTTGACGAGCAGGTTCTCGCTATTGCCGTCGAAACGCTGGCGCGCACCGCGCTCAATTTTCCCTGGACGCGAGGTATCTGA", - "dna_sequence_length": 1311, - "functions": [ - "p-aminobenzoyl-glutamate hydrolase, A subunit" - ], - "id": "CDS_1325", - "location": [ - [ - "NC_000913", - 1404565, - "-", - 1311 - ] - ], - "md5": "2215d8751bab33acb5f1e9f2ab980d59", - "parent_gene": "", - "protein_md5": "d2f2d677985ccf716b67afb1efe80d57", - "protein_translation": "MESLNQFVNSLAPKLSHWRRDFHHYAESGWVEFRTATLVAEELHQLGYSLALGREVVNESSRMGLPDEFTLQREFERARQQGALAQWIAAFEGGFTGIVATLDTGRPGPVMAFRVDMDALDLSEEQDVSHRPYRDGFASCNAGMMHACGHDGHTAIGLGLAHTLKQFESGLHGVIKLIFQPAEEGTRGARAMVDAGVVDDVDYFTAVHIGTGVPAGTVVCGSDNFMATTKFDAHFTGTAAHAGAKPEDGHNALLAAAQATLALHAIAPHSEGASRVNVGVMQAGSGRNVVPASALLKVETRGASDVINQYVFDRAQQAIQGAATMYGVGVETRLMGAATASSPSPQWVAWLQSQAAQVAGVNQAIERVEAPAGSEDATLMMARVQQHQGQASYVVFGTQLAAGHHNEKFDFDEQVLAIAVETLARTALNFPWTRGI", - "protein_translation_length": 436, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1335" - ], - [ - "gene_synonym", - "GI:16129300" - ], - [ - "gene_synonym", - "GeneID:945831" - ], - [ - "gene_synonym", - "ASAP:ABE-0004496" - ], - [ - "gene_synonym", - "JW1333" - ], - [ - "gene_synonym", - "ydaK" - ], - [ - "gene_synonym", - "NP_415855.1" - ], - [ - "gene_synonym", - "b1339" - ], - [ - "gene_synonym", - "EcoGene:EG13353" - ], - [ - "gene_synonym", - "abgR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77744" - ] - ], - "dna_sequence": "ATGGCTTTTCAGGTAAAAATTCATCAAATTCGGGCTTTTGTTGAAGTGGCTCGTCAGGGCAGCATTCGCGGAGCGAGCCGAATGTTGAATATGTCGCAACCGGCACTGAGTAAATCTATTCAGGAGCTAGAAGAAGGGTTAGCGGCGCAACTCTTTTTTCGCCGTAGTAAAGGCGTGACGTTAACTGATGCCGGTGAAAGTTTTTATCAGCACGCCAGTCTAATTCTTGAAGAGCTGCGCGCAGCCCAAGAGGATATTCGCCAACGACAAGGGCAACTGGCAGGGCAGATTAATATCGGCATGGGGGCCAGTATTTCCCGCAGTCTGATGCCAGCTGTCATATCTCGTTTTCATCAGCAGCATCCGCAGGTAAAAGTACGCATTATGGAAGGGCAACTGGTGTCGATGATTAATGAATTGCGTCAGGGAGAATTGGATTTCACCATCAATACCTATTATCAGGGACCGTACGACCACGAATTTACTTTTGAGAAATTACTGGAAAAGCAATTCGCGATCTTTTGCCGCCCGGGACACCCCGCCATTGGTGCCCGTTCGATCAAACAGTTACTGGATTACAGCTGGACAATGCCGACGCCACACGGCAGCTACTACAAACAGTTGAGTGAATTGCTTGACGATCAGGCGCAAACGCCACAGGTCGGTGTAGTCTGCGAGACGTTCTCAGCCTGTATCAGTCTGGTGGCAAAAAGCGATTTTCTCAGCAAACTGCCTGAAGAAATGGGCTGCGATCCCTTGCACGGACAGGGGCTGGTGATGTTGCCGGTTAGCGAAATTTTACCGAAAGCGGCCTATTATTTGATTCAGCGGCGTGATAGTCGCCAGACACCACTGACCGCGTCATTAATCACGCAATTCCGGCGAGAATGCGGCTATCTGCAAAGTTAA", - "dna_sequence_length": 909, - "functions": [ - "putative DNA-binding transcriptional regulator of abgABT operon" - ], - "id": "CDS_1326", - "location": [ - [ - "NC_000913", - 1404741, - "+", - 909 - ] - ], - "md5": "f48a729cb3a2e466da24f160fb832d6b", - "parent_gene": "", - "protein_md5": "810f731677eaf50e3b0ee7b3a82bf294", - "protein_translation": "MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQLFFRRSKGVTLTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYLQS", - "protein_translation_length": 302, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129301" - ], - [ - "gene_synonym", - "ECK1337" - ], - [ - "gene_synonym", - "GeneID:945953" - ], - [ - "gene_synonym", - "ASAP:ABE-0004502" - ], - [ - "gene_synonym", - "ydaL" - ], - [ - "gene_synonym", - "JW1334" - ], - [ - "gene_synonym", - "smrA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76053" - ], - [ - "gene_synonym", - "NP_415856.1" - ], - [ - "gene_synonym", - "b1340" - ], - [ - "gene_synonym", - "EcoGene:EG13354" - ] - ], - "dna_sequence": "ATGAACCTTGACGACAAATCGCTGTTTCTTGACGCCATGGAAGATGTCCAGCCGCTGAAACGTGCTACCGATGTCCACTGGCATCCAACGCGTAACCAACGTGCGCCGCAGCGTATCGACACGCTGCAGCTTGATAATTTCCTCACCACCGGATTTCTCGACATCATCCCACTAAGTCAGCCGCTGGAGTTTCGGCGGGAAGGGTTGCAACATGGGGTGCTGGATAAGCTGCGCAGTGGTAAATATCCGCAACAGGCGAGCCTGAATCTTTTGCGCCAGCCGGTGGAAGAGTGCCGCAAAATGGTGTTCAGTTTTATTCAACAAGCCCTGGCGGATGGTTTGCGTAACGTGCTGATTATTCATGGTAAAGGGCGGGATGATAAATCGCATGCCAATATTGTCCGCAGCTATGTGGCGCGCTGGCTGACCGAATTTGATGATGTTCAGGCATATTGCACCGCGCTACCGCATCATGGCGGCAGCGGGGCGTGTTACGTCGCACTACGTAAAACGGCGCAGGCGAAGCAAGAAAACTGGGAGCGCCACGCTAAGCGCAGTCGTTGA", - "dna_sequence_length": 564, - "functions": [ - "DNA endonuclease" - ], - "id": "CDS_1327", - "location": [ - [ - "NC_000913", - 1405979, - "+", - 564 - ] - ], - "md5": "27ee045a61a9173ed9951f9e112d89ce", - "parent_gene": "", - "protein_md5": "050219775973303342f92cb9f00a4d17", - "protein_translation": "MNLDDKSLFLDAMEDVQPLKRATDVHWHPTRNQRAPQRIDTLQLDNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMVFSFIQQALADGLRNVLIIHGKGRDDKSHANIVRSYVARWLTEFDDVQAYCTALPHHGGSGACYVALRKTAQAKQENWERHAKRSR", - "protein_translation_length": 187, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111253" - ], - [ - "gene_synonym", - "ECK1338" - ], - [ - "gene_synonym", - "ydaM" - ], - [ - "gene_synonym", - "ASAP:ABE-0004504" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77302" - ], - [ - "gene_synonym", - "b1341" - ], - [ - "gene_synonym", - "EcoGene:EG13355" - ], - [ - "gene_synonym", - "JW5206" - ], - [ - "gene_synonym", - "NP_415857.2" - ], - [ - "gene_synonym", - "GeneID:945909" - ] - ], - "dna_sequence": "ATGATTACGCACAACTTCAATACCCTGGACTTACTCACCAGTCCTGTCTGGATCGTTTCGCCCTTTGAGGAACAGTTAATTTATGCCAATAGCGCGGCGAAACTGTTGATGCAAGACCTCACGTTTAGTCAGCTACGAACCGGACCCTATTCCGTCTCCTCACAAAAAGAACTGCCGAAATACCTCTCCGATCTGCAAAACCAACACGATATTATCGAAATCCTCACTGTTCAGCGTAAAGAAGAGGAAACAGCATTGAGCTGTCGGCTTGTTTTGCGAAAGCTGACAGAAACAGAACCGGTGATTATTTTCGAAGGTATCGAAGCGCCGGCAACGCTGGGTTTAAAAGCCAGTCGCTCGGCAAATTATCAGCGCAAAAAACAAGGTTTTTATGCGCGCTTTTTTCTGACTAACTCTGCACCAATGTTGTTGATTGACCCGTCACGAGATGGACAAATCGTCGATGCTAACCTCGCCGCGCTCAATTTCTATGGTTATAACCATGAAACGATGTGCCAGAAACATACCTGGGAAATAAATATGCTCGGGCGTCGCGTCATGCCTATCATGCATGAAATCTCGCATTTACCCGGTGGTCATAAACCTTTGAATTTTGTTCATAAACTGGCGGATGGTTCGACTCGTCATGTGCAGACCTATGCCGGACCGATTGAAATTTATGGCGACAAGCTCATGTTATGTATTGTGCATGATATTACTGAGCAAAAACGGCTGGAGGAGCAGCTGGAACATGCTGCTCACCATGACGCGATGACCGGATTACTGAATCGGCGACAGTTTTATCACATTACGGAACCAGGCCAAATGCAGCATCTCGCCATCGCTCAGGATTACAGCTTGTTGCTCATCGACACCGATCGTTTTAAACACATTAACGATCTCTATGGGCATTCTAAAGGTGATGAGGTGTTATGCGCCCTCGCCCGCACCCTCGAAAGTTGCGCTCGCAAAGGCGATTTGGTGTTTCGTTGGGGAGGCGAAGAGTTTGTCTTATTGCTACCAAGAACCCCACTGGATACCGCGCTTTCGCTGGCTGAAACTATCCGCGTAAGCGTGGCAAAAGTGAGTATTTCGGGCTTACCACGCTTTACCGTCAGCATTGGTGTGGCGCATCACGAAGGAAATGAAAGCATCGATGAACTGTTTAAACGCGTTGATGATGCTTTGTATCGGGCGAAAAATGATGGACGCAACCGCGTGCTGGCGGCATAA", 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- "gene_synonym", - "ydaN" - ], - [ - "gene_synonym", - "NP_415858.1" - ], - [ - "gene_synonym", - "b1342" - ], - [ - "gene_synonym", - "zntB" - ], - [ - "gene_synonym", - "EcoGene:EG13356" - ], - [ - "gene_synonym", - "ASAP:ABE-0004508" - ], - [ - "gene_synonym", - "GeneID:945910" - ] - ], - "dna_sequence": "GTGGAAGCGATTAAGGGATCGGACGTTAATGTCCCGGATGCAGTATTTGCCTGGATGCTGGATGGTAGAGGCGGCGTTAAACCGCTGGAAAATACAGATGTGATTGATGAAGCGCATCCCTGTTGGCTCCACCTTAATTATGTACACCATGATAGCGCCCAATGGCTGGCGACAACACCGCTGCTTCCCAATAACGTACGTGATGCGCTGGCGGGCGAGAGCACGCGTCCCCGAGTCAGCCGTCTCGGTGAAGGCACGCTGATTACATTGCGCTGTATAAACGGCAGCACCGATGAACGCCCCGATCAACTGGTCGCCATGCGTGTATATATGGACGGGCGGTTAATTGTTTCGACCCGACAACGCAAAGTGCTGGCGCTGGACGATGTGGTGAGCGATCTGGAAGAGGGCACGGGTCCGACCGATTGCGGGGGATGGCTGGTGGATGTGTGCGATGCGTTGACCGATCATTCCAGTGAATTTATCGAGCAGCTGCACGATAAAATTATCGACCTTGAAGATAATCTCCTTGATCAGCAAATTCCACCGCGTGGATTCCTGGCTCTGCTGCGCAAACAATTAATTGTGATGCGTCGCTATATGGCACCGCAACGTGATGTTTATGCTCGTCTTGCCAGTGAACGTTTGCCGTGGATGAGCGATGACCAACGCCGTCGGATGCAGGATATTGCCGATCGCCTTGGGCGCGGCCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCGTTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACCGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTCTGTTAGTTGTTCTTATTGGTGGTGTTGCTTTATGGTTGCATCGTAGTAAATGGTTGTAA", - "dna_sequence_length": 984, - "functions": [ - "putative Zn(II) transporter" - ], - "id": "CDS_1329", - "location": [ - [ - "NC_000913", - 1408050, - "+", - 984 - ] - ], - "md5": "99c64c3898d297b5197d14363882b4f1", - "parent_gene": "", - "protein_md5": "60b10b9f797df5456b5e5950dc4fd589", - "protein_translation": "MEAIKGSDVNVPDAVFAWMLDGRGGVKPLENTDVIDEAHPCWLHLNYVHHDSAQWLATTPLLPNNVRDALAGESTRPRVSRLGEGTLITLRCINGSTDERPDQLVAMRVYMDGRLIVSTRQRKVLALDDVVSDLEEGTGPTDCGGWLVDVCDALTDHSSEFIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPWMSDDQRRRMQDIADRLGRGLDEIDACIARTGVMADEIAQVMQENLARRTYTMSLMAMVFLPSTFLTGLFGVNLGGIPGGGWQFGFSIFCILLVVLIGGVALWLHRSKWL", - "protein_translation_length": 327, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rhlC" - ], - [ - "gene_synonym", - "dbpA" - ], - [ - "gene_synonym", - "JW1337" - ], - [ - "gene_synonym", - "EcoGene:EG10210" - ], - [ - "gene_synonym", - "GeneID:947153" - ], - [ - "gene_synonym", - "NP_415859.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004511" - ], - [ - "gene_synonym", - "ECK1340" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21693" - ], - [ - "gene_synonym", - "b1343" - ], - [ - "gene_synonym", - "GI:16129304" - ] - ], - "dna_sequence": "GTGACCGCTTTTTCTACCCTGAATGTTTTGCCTCCCGCCCAACTCACGAACCTTAATGAGTTGGGTTATTTAACCATGACGCCGGTGCAGGCCGCCGCGCTTCCGGCGATCCTTGCCGGAAAAGATGTTCGCGTGCAGGCGAAAACCGGCAGCGGCAAAACGGCGGCTTTTGGCCTCGGCTTGTTACAGCAAATTGATGCGTCGCTATTTCAAACCCAGGCTTTAGTGCTGTGTCCTACGCGTGAACTGGCGGATCAGGTGGCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTGCGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGTTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGGCGTTTGCTGGATCACCTGCAAAAAGGCACGGTATCACTGGATGCGTTGAATACGCTGGTGATGGATGAGGCCGACCGCATGCTGGATATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGACGCTTCTGTTTTCGGCAACCTGGCCGGAAGCCATCGCTGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACAGATGCTTTGCCACCCATTGAACAACAATTTTATGAGACATCCAGCAAAGGCAAAATTCCTCTGTTGCAACGGTTATTAAGCTTGCATCAGCCATCCTCTTGCGTGGTGTTTTGCAATACCAAAAAAGATTGCCAGGCTGTCTGCGACGCGCTGAATGAAGTAGGGCAAAGTGCATTGTCATTACACGGCGATTTGGAGCAACGCGATCGCGATCAGACCCTGGTACGTTTTGCTAACGGTAGCGCCCGTGTACTGGTCGCGACTGATGTTGCTGCGCGTGGTCTGGATATTAAATCGCTTGAGCTGGTGGTGAACTTTGAGCTGGCGTGGGACCCTGAAGTTCATGTACATCGCATCGGTCGTACAGCTCGTGCAGGAAATAGCGGTCTGGCGATCAGTTTCTGTGCTCCGGAAGAAGCACAGCGGGCCAATATCATTTCTGACATGTTGCAGATAAAACTTAACTGGCAAACGCCGCCAGCTAATAGTTCCATTGCGACGCTGGAAGCAGAAATGGCAACGTTGTGTATCGATGGCGGGAAAAAAGCCAAAATGCGCCCGGGTGATGTATTAGGTGCACTGACAGGAGATATCGGGCTTGATGGCGCAGATATTGGCAAAATCGCCGTGCATCCGGCGCATGTCTATGTCGCGGTCCGTCAGGCTGTTGCTCATAAAGCATGGAAACAGTTACAGGGCGGGAAGATTAAAGGAAAAACGTGCCGGGTGCGGTTATTAAAATAA", 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"UniProtKB/Swiss-Prot:P76055" - ], - [ - "gene_synonym", - "stcA" - ], - [ - "gene_synonym", - "ydaO" - ], - [ - "gene_synonym", - "NP_415860.1" - ], - [ - "gene_synonym", - "b1344" - ], - [ - "gene_synonym", - "ttcA" - ], - [ - "gene_synonym", - "ECK1341" - ], - [ - "gene_synonym", - "ASAP:ABE-0004514" - ], - [ - "gene_synonym", - "GeneID:948967" - ], - [ - "gene_synonym", - "EcoGene:EG13357" - ] - ], - "dna_sequence": "ATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCAAAGCGCGCCAATCAATTTTTCGCTGGTGGCTGTTAACCTCGATCAAAAGCAACCGGGCTTCCCGGAACACGTTCTGCCCGAGTATCTTGAAAAGCTGGGCGTTGAGTACAAGATTGTTGAAGAGAATACTTACGGTATCGTGAAAGAGAAGATTCCAGAGGGCAAAACCACTTGCTCACTGTGTTCTCGCCTTCGTCGCGGTATCCTTTATCGTACCGCAACGGAACTGGGGGCGACGAAGATCGCGTTGGGTCACCATCGTGACGATATCCTGCAAACGTTGTTCTTAAATATGTTCTACGGCGGTAAGATGAAAGGTATGCCTCCGAAACTGATGAGCGATGATGGCAAACATATCGTTATTCGTCCGCTGGCCTACTGCCGCGAGAAAGATATTCAGCGATTTGCCGATGCAAAAGCGTTCCCGATTATTCCGTGCAACCTGTGCGGTTCACAGCCTAACCTGCAACGTCAGGTGATTGCTGACATGTTGCGTGACTGGGATAAACGTTATCCAGGGCGTATCGAGACGATGTTCAGCGCGATGCAGAATGTGGTGCCGTCGCATCTGTGCGATACCAACCTGTTCGATTTCAAAGGCATCACCCACGGTTCTGAAGTGGTTAACGGGGGTGATCTGGCGTTTGATCGCGAAGAGATCCCACTACAACCGGCGTGCTGGCAGCCAGAAGAAGATGAAAATCAGTTGGATGAGTTACGGCTGAATGTGGTTGAAGTGAAATAA", - "dna_sequence_length": 936, - "functions": [ - "tRNA s(2)C32 thioltransferase, iron sulfur cluster protein" - ], - "id": "CDS_1331", - "location": [ - [ - "NC_000913", - 1411948, - "-", - 936 - ] - ], - "md5": "d081200542ca3ce786660d719b698cc1", - "parent_gene": "", - "protein_md5": "c94ae86371a55838b6fc272f1ea97ba3", - "protein_translation": "MQENQQITKKEQYNLNKLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHVLPEYLEKLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPNLQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVNGGDLAFDREEIPLQPACWQPEEDENQLDELRLNVVEVK", - "protein_translation_length": 311, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1339" - ], - [ - "gene_synonym", - "GI:16129306" - ], - [ - "gene_synonym", - "GeneID:946976" - ], - [ - "gene_synonym", - "ydaP" - ], - [ - "gene_synonym", - "b1345" - ], - [ - "gene_synonym", - "NP_415861.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004517" - ], - [ - "gene_synonym", - "ECK1342" - ], - [ - "gene_synonym", - "intR" - ], - [ - "gene_synonym", - "EcoGene:EG13358" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76056" - ] - ], - "dna_sequence": "ATGTCTAAATTACCAACAGGTGTCGAGATTAGAGGTAGATACATTCGCATCTGGTTCATGTTTCGAGGAAAACGATGTCGGGAAACATTAAAAGGCTGGGAGATTACAAACAGTAATATTAAAAAGGCCGGAAATTTAAGAGCGCTGATAGTTCATGAAATAAACTCCGGTGAATTTGAGTATTTAAGACGTTTTCCCCAGTCCAGCACTGGGGCAAAAATGGTGACAACGAGAGTCATAAAAACGTTCGGAGAGCTTTGTGATATCTGGACAAAAATTAAAGAGACAGAGTTAACAACAAACACAATGAAGAAAACGAAATCACAATTAAAAACACTCAGAATAATAATTTGTGAAAGTACCCCGATATCACATATTCGTTATAGCGATATCTTAAACTACCGGAATGAACTGCTGCATGGAGAAACGCTTTACCTGGATAATCCAAGATCCAACAAAAAAGGAAGAACCGTGCGCACAGTTGATAACTATATCGCCCTGCTCTGTTCGCTGTTGCGTTTTGCGTATCAGTCGGGATTTATATCAACCAAACCATTTGAAGGAGTAAAAAAATTACAGCGAAACAGAATAAAGCCTGATCCGTTATCTAAAACAGAATTCAATGCATTAATGGAAAGTGAAAAAGGACAGAGCCAGAACTTGTGGAAATTTGCCGTTTACTCAGGACTTCGTCACGGGGAACTGGCAGCTCTGGCGTGGGAGGATGTGGATCTCGAAAAGGGAATAGTGAATGTCAGAAGAAACCTGACGATACTTGATATGTTCGGTCCCCCAAAAACAAATGCCGGGATCCGAACAGTAACACTACTGCAGCCTGCTCTTGAAGCACTGAAGGAGCAATACAAACTGACCGGGCATCATCGCAAAAGCGAAATCACCTTTTATCATCGGGAGTACGGCAGAACCGAAAAGCAAAAACTGCATTTTGTTTTCATGCCCAGGGTGTGTAACGGAAAACAAAAACCTTATTACTCGGTAAGCAGTTTGGGGGCAAGGTGGAATGCAGCAGTAAAACGTGCTGGTATTCGCCGCCGTAATCCGTACCATACGCGGCATACTTTTGCCTGCTGGCTGTTGACGGCAGGAGCGAACCCGGCATTTATAGCCAGCCAAATGGGGCATGAAACTGCGCAGATGGTGTATGAAATTTACGGTATGTGGATTGATGACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAG", 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- "ydaQ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76057" - ], - [ - "gene_synonym", - "ECK1343" - ], - [ - "gene_synonym", - "JW5207" - ], - [ - "gene_synonym", - "ASAP:ABE-0004519" - ], - [ - "gene_synonym", - "EcoGene:EG13359" - ] - ], - "dna_sequence": "ATGGCACAAGTAATCTTTAATGAAGAGTGGATGGTTGAATACGGCCTGATGCTTCGCACTGGTCTGGGGGCCAGACAAATTGAAGCATACCGCCAGAACTGTTGGGTGGAGGGCTTCCACTTCAAACGAGTATCTCCTTTAGGTAAGCCAGACAGCAAACGAGGGATTATCTGGTACAACTATCCAAAGATAAATCAGTTTATCAAAGACTCATGA", - "dna_sequence_length": 216, - "functions": [ - "Rac prophage", - "conserved protein" - ], - "id": "CDS_1333", - "location": [ - [ - "NC_000913", - 1413452, - "-", - 216 - ] - ], - "md5": "2cc7e1704775fb9ce5354e268e2405cd", - "parent_gene": "", - "protein_md5": "c74ef7009315a1d8e1f7a1bfe045d258", - "protein_translation": "MAQVIFNEEWMVEYGLMLRTGLGARQIEAYRQNCWVEGFHFKRVSPLGKPDSKRGIIWYNYPKINQFIKDS", - "protein_translation_length": 71, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947504" - ], - [ - "gene_synonym", - "ECK1344" - ], - [ - "gene_synonym", - "ydaC" - ], - [ - "gene_synonym", - "NP_415863.1" - ], - [ - "gene_synonym", - "GI:16129308" - ], - [ - "gene_synonym", - "ASAP:ABE-0004522" - ], - [ - "gene_synonym", - "JW1341" - ], - [ - "gene_synonym", - "b1347" - ], - [ - "gene_synonym", - "rcbA" - ], - [ - "gene_synonym", - "EcoGene:EG11901" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33230" - ] - ], - "dna_sequence": "ATGTATAAAATTACCGCCACTATTGAAAAGGAAGGTGGCACTCCTACTAACTGGACAAGATATTCAAAATCTAAACTAACGAAATCAGAATGCGAAAAAATGCTCTCAGGTAAAAAAGAAGCAGGCGTTTCCAGAGAGCAGAAAGTAAAACTGATAAATTTTAATTGCGAGAAACTTCAGTCCTCGAGAATTGCATTGTATTCAAATTAA", - "dna_sequence_length": 210, - "functions": [ - "DUF1187 family protein, Rac prophage", - "putative double-strand break reduction protein" - ], - "id": "CDS_1334", - "location": [ - [ - "NC_000913", - 1413740, - "-", - 210 - ] - ], - "md5": "eed159ed2f1997b5b28a517fa387e7b3", - "parent_gene": "", - "protein_md5": "415ee6b0118dd8fe5eae1c9238df588f", - "protein_translation": "MYKITATIEKEGGTPTNWTRYSKSKLTKSECEKMLSGKKEAGVSREQKVKLINFNCEKLQSSRIALYSN", - "protein_translation_length": 69, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11900" - ], - [ - "gene_synonym", - "ydaB" - ], - [ - "gene_synonym", - "GeneID:945914" - ], - [ - "gene_synonym", - "GI:16129309" - ], - [ - "gene_synonym", - "ral" - ], - [ - "gene_synonym", - "ASAP:ABE-0004524" - ], - [ - "gene_synonym", - "ralR" - ], - [ - "gene_synonym", - "ECK1345" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33229" - ], - [ - "gene_synonym", - "NP_415864.1" - ], - [ - "gene_synonym", - "JW5208" - ], - [ - "gene_synonym", - "lar" - ], - [ - "gene_synonym", - "b1348" - ] - ], - "dna_sequence": "ATGAGATATGACAATGTTAAACCATGTCCATTTTGTGGTTGTCCATCAGTAACGGTGAAAGCCATTTCAGGATATTACCGAGCGAAGTGTAACGGATGCGAATCCCGAACCGGTTATGGTGGAAGTGAAAAAGAAGCACTCGAAAGATGGAATAAACGAACCACTGGAAATAATAATGGAGGTGTTCATGTATAA", - "dna_sequence_length": 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"ATGACTAAGCAACCACCAATCGCAAAAGCCGATCTGCAAAAAACTCAGGGAAACCGTGCACCAGCAGCAGTTAAAAATAGCGACGTGATTAGTTTTATTAACCAGCCATCAATGAAAGAGCAACTGGCAGCAGCTCTTCCACGCCATATGACGGCTGAACGTATGATCCGTATCGCCACCACAGAAATTCGTAAAGTTCCGGCGTTAGGAAACTGTGACACTATGAGTTTTGTCAGTGCGATCGTACAGTGTTCACAGCTCGGACTTGAGCCAGGTAGCGCCCTCGGTCATGCATATTTACTGCCTTTTGGTAATAAAAACGAAAAGAGCGGTAAAAAGAACGTTCAGCTAATCATTGGCTATCGCGGCATGATTGATCTGGCTCGCCGTTCTGGTCAAATCGCCAGCCTGTCAGCCCGTGTTGTCCGTGAAGGTGACGAGTTTAGCTTCGAATTTGGCCTTGATGAAAAGTTAATACACCGCCCGGGAGAAAACGAAGATGCCCCGGTTACCCACGTCTATGCTGTCGCAAGACTGAAAGACGGAGGTACTCAGTTTGAAGTTATGACGCGCAAACAGATTGAGCTGGTGCGCAGCCTGAGTAAAGCTGGTAATAACGGGCCGTGGGTAACTCACTGGGAAGAAATGGCAAAGAAAACGGCTATTCGTCGCCTGTTCAAATATTTGCCCGTATCAATTGAGATCCAGCGTGCAGTATCAATGGATGAAAAGGAACCACTGACAATCGATCCTGCAGATTCCTCTGTATTAACCGGGGAATACAGTGTAATCGATAATTCAGAGGAATAA", - "dna_sequence_length": 810, - "functions": [ - "Rac prophage", - "recombination and repair protein" - ], - "id": "CDS_1336", - "location": [ - [ - "NC_000913", - 1414793, - "-", - 810 - ] - ], - "md5": "470ecb15bc0d9d5124b75fa94dc6ed0a", - "parent_gene": "", - "protein_md5": "0e3806be9fca91c6b4790d9dbd9ca089", - "protein_translation": "MTKQPPIAKADLQKTQGNRAPAAVKNSDVISFINQPSMKEQLAAALPRHMTAERMIRIATTEIRKVPALGNCDTMSFVSAIVQCSQLGLEPGSALGHAYLLPFGNKNEKSGKKNVQLIIGYRGMIDLARRSGQIASLSARVVREGDEFSFEFGLDEKLIHRPGENEDAPVTHVYAVARLKDGGTQFEVMTRKQIELVRSLSKAGNNGPWVTHWEEMAKKTAIRRLFKYLPVSIEIQRAVSMDEKEPLTIDPADSSVLTGEYSVIDNSEE", - "protein_translation_length": 269, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15032" - ], - [ - "gene_synonym", - "sbcA" - ], - [ - "gene_synonym", - "GeneID:945918" - ], - [ - "gene_synonym", - "NP_415866.1" - ], - [ - "gene_synonym", - "rmuB" - ], - [ - "gene_synonym", - "JW1344" - ], - [ - "gene_synonym", - "GI:16129311" - ], - [ - "gene_synonym", - "ASAP:ABE-0004531" - ], - [ - "gene_synonym", - "recE" - ], - [ - "gene_synonym", - "b1350" - ], - [ - "gene_synonym", - "ECK1347" - ], - [ - "gene_synonym", - "EcoGene:EG10827" - ] - ], - "dna_sequence": "ATGAGCACAAAACCACTCTTCCTGTTACGGAAAGCGAAAAAATCATCCGGTGAACCTGACGTCGTCCTGTGGGCAAGCAACGATTTTGAATCGACCTGTGCCACTCTGGACTACCTGATCGTTAAGTCAGGTAAAAAACTGAGCAGCTATTTTAAAGCTGTTGCCACGAATTTTCCTGTCGTTAATGACCTGCCCGCTGAAGGTGAGATCGATTTTACCTGGAGTGAACGCTATCAACTCAGCAAAGACTCCATGACATGGGAACTAAAACCGGGAGCAGCACCAGACAACGCTCACTATCAAGGCAATACCAACGTCAACGGCGAAGACATGACTGAGATTGAGGAGAATATGCTACTCCCAATTTCTGGCCAGGAACTGCCCATTCGTTGGCTTGCTCAACACGGCAGCGAAAAACCGGTAACGCACGTTTCACGCGACGGACTCCAGGCATTACACATTGCTCGGGCTGAAGAACTACCGGCTGTTACTGCCCTGGCTGTTTCCCACAAAACCAGCCTGCTCGACCCGCTGGAAATTCGCGAACTCCACAAACTGGTTCGTGACACTGACAAAGTTTTCCCTAATCCTGGTAATTCAAACCTGGGACTGATAACTGCTTTTTTCGAAGCATACCTGAACGCTGACTACACCGATCGAGGACTGCTGACAAAAGAGTGGATGAAGGGTAATCGTGTTTCACACATCACTCGCACGGCTTCCGGTGCTAATGCTGGCGGCGGAAACCTCACCGATCGCGGCGAAGGTTTCGTACACGATCTGACGTCACTGGCGCGCGACGTAGCCACTGGCGTACTGGCCCGTTCAATGGATCTGGACATCTATAACCTTCATCCGGCACACGCTAAACGCATTGAGGAAATTATCGCTGAAAATAAACCGCCCTTTTCTGTTTTCCGCGACAAATTCATCACCATGCCTGGCGGGCTGGATTATTCCCGCGCCATCGTGGTTGCGTCCGTAAAAGAAGCACCAATTGGGATCGAGGTCATCCCCGCGCACGTCACTGAATATCTGAACAAAGTACTGACTGAAACCGATCATGCCAACCCTGATCCGGAAATCGTGGATATTGCCTGCGGTCGCTCCTCTGCCCCGATGCCGCAGCGAGTAACAGAAGAAGGAAAACAGGATGATGAAGAAAAACCGCAACCATCTGGAACAACGGCAGTTGAACAGGGAGAGGCTGAAACAATGGAACCGGACGCAACTGAACATCATCAGGACACGCAGCCGCTGGATGCTCAGTCACAGGTAAATTCTGTTGATGCGAAATATCAGGAACTGCGGGCAGAACTCCATGAAGCCCGGAAAAACATTCCATCAAAAAATCCTGTCGATGACGATAAATTGCTTGCTGCATCACGTGGTGAATTTGTTGACGGAATTAGCGACCCGAACGATCCGAAATGGGTAAAGGGGATCCAGACTCGCGATTGTGTGTACCAGAACCAGCCAGAAACGGAAAAAACCAGCCCAGATATGAATCAACCTGAGCCAGTAGTGCAACAGGAACCGGAAATAGCCTGCAATGCCTGCGGCCAGACTGGCGGGGATAACTGCCCTGACTGTGGTGCGGTGATGGGCGACGCAACATACCAGGAAACATTCGATGAAGAGAGTCAGGTTGAAGCTAAGGAAAATGATCCGGAGGAAATGGAAGGCGCTGAACATCCGCACAATGAGAATGCTGGCAGCGATCCGCATCGCGATTGCAGTGATGAAACTGGCGAAGTCGCAGATCCCGTAATCGTAGAAGACATAGAGCCAGGTATTTATTACGGAATTTCGAATGAGAATTACCACGCGGGTCCCGGTATCAGTAAGTCTCAGCTCGATGACATTGCTGATACTCCGGCACTATATTTGTGGCGTAAAAATGCCCCCGTGGACACCACAAAGACAAAAACGCTCGATTTAGGAACTGCTTTCCACTGCCGGGTACTTGAACCGGAAGAATTCAGTAACCGCTTTATCGTAGCACCTGAATTTAACCGCCGTACAAACGCCGGAAAAGAAGAAGAGAAAGCGTTTCTGATGGAATGCGCAAGCACAGGAAAAACGGTTATCACTGCGGAAGAAGGCCGGAAAATTGAACTCATGTATCAAAGCGTTATGGCTTTGCCGCTGGGGCAATGGCTTGTTGAAAGCGCCGGACACGCTGAATCATCAATTTACTGGGAAGATCCTGAAACAGGAATTTTGTGTCGGTGCCGTCCGGACAAAATTATCCCTGAATTTCACTGGATCATGGACGTGAAAACTACGGCGGATATTCAACGATTCAAAACCGCTTATTACGACTACCGCTATCACGTTCAGGATGCATTCTACAGTGACGGTTATGAAGCACAGTTTGGAGTGCAGCCAACTTTCGTTTTTCTGGTTGCCAGCACAACTATTGAATGCGGACGTTATCCGGTTGAAATTTTCATGATGGGCGAAGAAGCAAAACTGGCAGGTCAACAGGAATATCACCGCAATCTGCGAACCCTGTCTGACTGCCTGAATACCGATGAATGGCCAGCTATTAAGACATTATCACTGCCCCGCTGGGCTAAGGAATATGCAAATGACTAA", 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"MSTKPLFLLRKAKKSSGEPDVVLWASNDFESTCATLDYLIVKSGKKLSSYFKAVATNFPVVNDLPAEGEIDFTWSERYQLSKDSMTWELKPGAAPDNAHYQGNTNVNGEDMTEIEENMLLPISGQELPIRWLAQHGSEKPVTHVSRDGLQALHIARAEELPAVTALAVSHKTSLLDPLEIRELHKLVRDTDKVFPNPGNSNLGLITAFFEAYLNADYTDRGLLTKEWMKGNRVSHITRTASGANAGGGNLTDRGEGFVHDLTSLARDVATGVLARSMDLDIYNLHPAHAKRIEEIIAENKPPFSVFRDKFITMPGGLDYSRAIVVASVKEAPIGIEVIPAHVTEYLNKVLTETDHANPDPEIVDIACGRSSAPMPQRVTEEGKQDDEEKPQPSGTTAVEQGEAETMEPDATEHHQDTQPLDAQSQVNSVDAKYQELRAELHEARKNIPSKNPVDDDKLLAASRGEFVDGISDPNDPKWVKGIQTRDCVYQNQPETEKTSPDMNQPEPVVQQEPEIACNACGQTGGDNCPDCGAVMGDATYQETFDEESQVEAKENDPEEMEGAEHPHNENAGSDPHRDCSDETGEVADPVIVEDIEPGIYYGISNENYHAGPGISKSQLDDIADTPALYLWRKNAPVDTTKTKTLDLGTAFHCRVLEPEEFSNRFIVAPEFNRRTNAGKEEEKAFLMECASTGKTVITAEEGRKIELMYQSVMALPLGQWLVESAGHAESSIYWEDPETGILCRCRPDKIIPEFHWIMDVKTTADIQRFKTAYYDYRYHVQDAFYSDGYEAQFGVQPTFVFLVASTTIECGRYPVEIFMMGEEAKLAGQQEYHRNLRTLSDCLNTDEWPAIKTLSLPRWAKEYAND", - "protein_translation_length": 866, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10813" - ], - [ - "gene_synonym", - "GI:16129312" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15033" - ], - [ - "gene_synonym", - "JW1345" - ], - [ - "gene_synonym", - "GeneID:945920" - ], - [ - "gene_synonym", - "ASAP:ABE-0004533" - ], - [ - "gene_synonym", - "b1351" - ], - [ - "gene_synonym", - "sbcA" - ], - [ - "gene_synonym", - "racC" - ], - [ - "gene_synonym", - "NP_415867.1" - ], - [ - "gene_synonym", - "ECK1348" - ] - ], - "dna_sequence": "ATGATTACCAATTATGAAGCCACTGTTGTAACTACCGATGACATTGTTCACGAGGTGAATCTGGAAGGAAAGCGCATTGGCTACGTAATTAAAACAGAAAATAAAGAAACCCCATTCACTGTGGTTGATATCGATGGTCCATCAGGCAACGTAAAAACACTTGATGAAGGTGTCAAAAAAATGTGCCTGGTGCATATCGGAAAGAATCTGCCCGCAGAAAAAAAAGCCGAATTTCTGGCAACTCTAATTGCAATGAAATTAAAAGGTGAAATCTGA", - "dna_sequence_length": 276, - "functions": [ - "Rac prophage", - "uncharacterized protein" - ], - "id": "CDS_1338", - "location": [ - [ - "NC_000913", - 1417763, - "-", - 276 - ] - ], - "md5": "b5ebcc1c6bfe2cf3f95f38675d6fff4f", - "parent_gene": "", - "protein_md5": "6e0e11932422f2f2b43861b42984b455", - "protein_translation": "MITNYEATVVTTDDIVHEVNLEGKRIGYVIKTENKETPFTVVDIDGPSGNVKTLDEGVKKMCLVHIGKNLPAEKKAEFLATLIAMKLKGEI", - "protein_translation_length": 91, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4526" - ], - [ - "gene_synonym", - "ydaE" - ], - [ - "gene_synonym", - "JW1346" - ], - [ - "gene_synonym", - "ASAP:ABE-0285047" - ], - [ - "gene_synonym", - "GeneID:948959" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38394" - ], - [ - "gene_synonym", - "YP_588451.1" - ], - [ - "gene_synonym", - "EcoGene:EG12156" - ], - [ - "gene_synonym", - "GI:94541109" - ], - [ - "gene_synonym", - "ECK1349" - ] - ], - "dna_sequence": "ATGACTAAGAAAATAAAATGTGCTTACCACCTTTGCAAAAAAGACGTTGAAGAAAGCAAAGCTATTGAAAGAATGCTTCACTTCATGCACGGGATTTTATCAAAAGACGAACCGAGAAAATATTGCAGTGAAGCTTGTGCCGAAAAAGACCAGATGGCACATGAACTTTAA", - "dna_sequence_length": 171, - "functions": [ - "conserved protein, Rac prophage" - ], - "id": "CDS_1339", - "location": [ - [ - "NC_000913", - 1418008, - "-", - 171 - ] - ], - "md5": "e168344f963a87294a42525b6b766e31", - "parent_gene": "", - "protein_md5": "82e50642389bda267bedf97589ca7487", - "protein_translation": "MTKKIKCAYHLCKKDVEESKAIERMLHFMHGILSKDEPRKYCSEACAEKDQMAHEL", - "protein_translation_length": 56, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111255" - ], - [ - "gene_synonym", - "ydaD" - ], - [ - "gene_synonym", - "JW1347" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38393" - ], - [ - "gene_synonym", - "kilR" - ], - [ - "gene_synonym", - "ECK1350" - ], - [ - "gene_synonym", - "GeneID:945921" - ], - [ - "gene_synonym", - "NP_415869.2" - ], - [ - "gene_synonym", - "EcoGene:EG12155" - ], - [ - "gene_synonym", - "b1352" - ], - [ - "gene_synonym", - "kil" - ], - [ - "gene_synonym", - "ASAP:ABE-0004537" - ] - ], - "dna_sequence": "ATGATTGCACATCACTTCGGAACTGATGAAATACCACGTCAGTGTGTGACTCCTGGCGATTATGTTCTTCATGAAGGCCGGACATATATTGCCTCGGCAAACAATATTAAAAAGCGAAAACTATATATTCGTAACCTGACCACAAAAACATTCATTACTGACCGCATGATTAAAGTCTTCCTCGGTCGTGATGGTTTACCTGTAAAGGCGGAGTCATGGTGA", - "dna_sequence_length": 222, - "functions": [ - "killing protein, Rac prophage", - "FtsZ inhibitor protein" - ], - "id": "CDS_1340", - "location": [ - [ - "NC_000913", - 1418229, - "-", - 222 - ] - ], - "md5": "20c352541f6f634a24f689c426fd4a10", - "parent_gene": "", - "protein_md5": "1aa43c0fc99fbb91e0addfd4a3984a23", - "protein_translation": "MIAHHFGTDEIPRQCVTPGDYVLHEGRTYIASANNIKKRKLYIRNLTTKTFITDRMIKVFLGRDGLPVKAESW", - "protein_translation_length": 73, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "git" - ], - [ - "gene_synonym", - "GeneID:945913" - ], - [ - "gene_synonym", - "GI:90111256" - ], - [ - "gene_synonym", - "ASAP:ABE-0004540" - ], - [ - "gene_synonym", - "EcoGene:EG12154" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38392" - ], - [ - "gene_synonym", - "b1353" - ], - [ - "gene_synonym", - "ECK1351" - ], - [ - "gene_synonym", - "JW5209" - ], - [ - "gene_synonym", - "sieB" - ], - [ - "gene_synonym", - "NP_415870.4" - ] - ], - "dna_sequence": "ATGTTGGATGTATTTACTCCATTGTTGAAACTTTTTGCTAACGAGCCACTCGAAAGACTTATGTATACGATTATCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGTTATTCTGGAACAGCAGGAGTAGACGTTTTAATCGTTAG", - "dna_sequence_length": 489, - "functions": [ - "phage superinfection exclusion protein, Rac prophage" - ], - "id": "CDS_1341", - "location": [ - [ - "NC_000913", - 1418671, - "+", - 489 - ] - ], - "md5": "30894006c1068d1b1450de663b0fd743", - "parent_gene": "", - "protein_md5": "84246535c9140de817d6e94d026b2732", - "protein_translation": "MLDVFTPLLKLFANEPLERLMYTIIIFGLTLWLIPKEFTVAFNAYTEIPWLFQIIVFAFSFVVAISFSRLRAHIQKHYSLLPEQRVLLRLSEKEIAVFKDFLKTGNLIITSPCRNPVMKKLERKGIIQHQSDSANCSYYLVTEKYSHFMKLFWNSRSRRFNR", - "protein_translation_length": 162, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4527" - ], - [ - "gene_synonym", - "ydaF" - ], - [ - "gene_synonym", - "JW1349" - ], - [ - "gene_synonym", - "GI:94541091" - ], - [ - "gene_synonym", - "NP_415872.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACW0" - ], - [ - "gene_synonym", - "EcoGene:EG12157" - ], - [ - "gene_synonym", - "GeneID:945911" - ], - [ - "gene_synonym", - "ECK1352" - ], - [ - "gene_synonym", - "ASAP:ABE-0285048" - ] - ], - "dna_sequence": "ATGCAAAAAATCGACCTCGGCAACAACGAATCCCTGGTGTGCGGCGTGTTCCCCAACCAGGATGGAACGTTCACTGCCATGACGTATACCAAAAGCAAAACATTTAAAACCGAAACTGGTGCGCGCCGATGGTTGGAGAAGCACACAGTAAGCTAA", - "dna_sequence_length": 156, - "functions": [ - "uncharacterized protein, Rac prophage" - ], - "id": "CDS_1342", - "location": [ - [ - "NC_000913", - 1419311, - "-", - 156 - ] - ], - "md5": "e611cb53ef4267ccafb9d7633ac787f0", - "parent_gene": "", - "protein_md5": "fa243047619d08779918c7e851d3b226", - "protein_translation": "MQKIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTETGARRWLEKHTVS", - "protein_translation_length": 51, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ydaG" - ], - [ - "gene_synonym", - "GI:90111257" - ], - [ - "gene_synonym", - "EcoGene:EG12174" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76061" - ], - [ - "gene_synonym", - "ASAP:ABE-0004544" - ], - [ - "gene_synonym", - "JW5210" - ], - [ - "gene_synonym", - "GeneID:945907" - ], - [ - "gene_synonym", - "ECK1353" - ], - [ - "gene_synonym", - "b1355" - ], - [ - "gene_synonym", - "NP_415873.2" - ], - [ - "gene_synonym", - "gatA" - ] - ], - "dna_sequence": "ATGGTGCATTACGAAGTAGTTCAGTATTTGATGGATTGTTGCGGTATCACTTACAACCAGGCTGTGCAGGCTTTACGCAGCAACGACTGGGATCTCTGGCAGGCAGAAGTCGCTATACGTAGCAACAAGATGTGA", - "dna_sequence_length": 135, - "functions": [ - "Rac prophage", - "uncharacterized protein" - ], - "id": "CDS_1343", - "location": [ - [ - "NC_000913", - 1419456, - "-", - 135 - ] - ], - "md5": "7a339db08e299ca940a427b377daa72c", - "parent_gene": "", - "protein_md5": "df3f15b3f86bda18bdc66fe91a77dbb9", - "protein_translation": "MVHYEVVQYLMDCCGITYNQAVQALRSNDWDLWQAEVAIRSNKM", - "protein_translation_length": 44, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13360" - ], - [ - "gene_synonym", - "JW1351" - ], - [ - "gene_synonym", - "racR" - ], - [ - "gene_synonym", - "NP_415874.1" - ], - [ - "gene_synonym", - "GI:16129317" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76062" - ], - [ - "gene_synonym", - "GeneID:945899" - ], - [ - "gene_synonym", - "ASAP:ABE-0004548" - ], - [ - "gene_synonym", - "ydaR" - ], - [ - "gene_synonym", - "ECK1354" - ], - [ - "gene_synonym", - "b1356" - ], - [ - "gene_synonym", - "cohR" - ] - ], - "dna_sequence": "ATGCTTAGTGGTAAAGACTTAGGCCGAGCGATAGAGCAGGCCATTAACAAAAAAATCGCATCGGGATCCGTCAAATCAAAGGCGGAGGTCGCACGCCACTTTAAAGTCCAACCACCATCAATTTATGACTGGATTAAGAAAGGCTCTATAAGTAAAGATAAACTTCCAGAATTATGGCGTTTCTTTTCTGATGTTGTTGGTCCAGAGCATTGGGGGCTTAACGAATACCCCATACCAACCCCCACCAATTCAGATACAAAAAGTGAACTTTTAGATATAAACAACCTTTATCAAGCAGCCTCTGATGAAATAAGAGCGATTGTAGCTTTCCTGTTATCTGGAAATGCTACAGAACCAGATTGGGTTGACCACGATGTTCGCGCCTACATAGCAGCGATGGAAATGAAAGTGGGTAAGTATCTGAAAGCTCTTGAATCTGAACGGAAAAGCCAGAACATCACAAAAACTGGAACTTAA", - "dna_sequence_length": 477, - "functions": [ - "Rac prophage", - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_1344", - "location": [ - [ - "NC_000913", - 1420241, - "-", - 477 - ] - ], - "md5": "82ad9fd66eb63eafc7bcbb0c1b5f10bb", - "parent_gene": "", - "protein_md5": "92d0df0ae1aa1d10ccfa8e76f28a9d51", - "protein_translation": "MLSGKDLGRAIEQAINKKIASGSVKSKAEVARHFKVQPPSIYDWIKKGSISKDKLPELWRFFSDVVGPEHWGLNEYPIPTPTNSDTKSELLDINNLYQAASDEIRAIVAFLLSGNATEPDWVDHDVRAYIAAMEMKVGKYLKALESERKSQNITKTGT", - "protein_translation_length": 158, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13361" - ], - [ - "gene_synonym", - "JW1352" - ], - [ - "gene_synonym", - "NP_415875.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004552" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76063" - ], - [ - "gene_synonym", - "GI:16129318" - ], - [ - "gene_synonym", - "GeneID:945923" - ], - [ - "gene_synonym", - "ECK1355" - ], - [ - "gene_synonym", - "ydaS" - ], - [ - "gene_synonym", - "b1357" - ] - ], - "dna_sequence": "ATGAAAAAAGAGAACTATTCATTCAAGCAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTACGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTCATATTTACGACGTTCGGCATGTTGTTCGCAGAATATGTCAGTGAAGCAACTAAATGACAGTAACAAATCCTCATTTGATCATACCTGA", - 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"628b8682cdec6973dea98f81773b58b5", - "parent_gene": "", - "protein_md5": "aad01faa275e7a05ce258d1b495bf7d7", - "protein_translation": "MKNIATGDVLERIRRLAPSHVTAPFKTVAEWREWQLSEGQKRCEEINRQNRQLRVEKILNRSGIQPLHRKCSFSNYQVQNEGQRYALSQAKSIADELMTGCTNFAFSGKPGTGKNHLAAAIGNRLLKDGQTVIVVTVADVMSALHASYDDGQSGEKFLRELCEVDLLVLDEIGIQRETKNEQVVLHQIVDRRTASMRSVGMLTNLNYEAMKTLLGERIMDRMTMNGGRWVNFNWESWRPNVVQPGIAK", - "protein_translation_length": 248, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004562" - ], - [ - "gene_synonym", - "EcoGene:EG13365" - ], - [ - "gene_synonym", - "b1361" - ], - [ - "gene_synonym", - "GeneID:945927" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76066" - ], - [ - "gene_synonym", - "ydaW" - ], - [ - "gene_synonym", - "JW5211" - ], - [ - "gene_synonym", - "ECK1359" - ] - ], - "dna_sequence": "ATGTCGTCCAGCCAGGAATTGCGAAGTAATTTTTACCGGGAGAAAAATTTAATGGAGACTGTTTTTGACGCACTGAAAGCAATGGGAAAAGCCACATCCATAGAACTTGCTGCGCGACTTGATATCAGTCGTGAAGAAGTGCTGAACGAACTATGGGAACTGAAAAAGGCTGGTTTTGTTGATAAAAGCGCGTACACCTGGCGTGTGGCTGATAACAATGTTCAGCAGGAACAGCCAGCGCAGGCAGAACTGCCGGAAGAAATCACCACAGCAACAGTAGCGAAAATCTCAGAGTGCGATTTAACCGCGACGATTGAACAACGAGGACCACAAACGGCTGATGAGCTGGCTACATTGTTTGGTACCACATCACGCAAAGTGGCTTCAACGCTGGCAATGGCAATCAGCAAAGGTCGTCTGATTCGCGTAAATCAGGGCGGTAAATTTCGTTACTGCATACCGGGCGATAATTTACCAGCAGAGCCGAAAGCAGCATCGGT", - "dna_sequence_length": 500, - "id": "CDS_1349", - "location": [ - [ - "NC_000913", - 1422701, - "+", - 500 - ] - ], - "md5": "1e7b2b2bf4faaaf5f83af543e732a859", - "parent_gene": "", - "protein_md5": "2132ca70ea5900a9a5d80fe8b774da89", - "protein_translation": "MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAAS", - "protein_translation_length": 166, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945928" - ], - [ - "gene_synonym", - "EcoGene:EG13366" - ], - [ - "gene_synonym", - "ASAP:ABE-0004564" - ], - [ - "gene_synonym", - "rzpR" - ], - [ - "gene_synonym", - "b1362" - ], - [ - "gene_synonym", - "Rz" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77551" - ], - [ - "gene_synonym", - "ydaX" - ], - [ - "gene_synonym", - "ECK1360" - ], - [ - "gene_synonym", - "JW5212" - ] - ], - "dna_sequence": "ATCTCCGCTCTGGTTATCTGCATCGTCGTCTGCCTGTCATGGGGTGTTAATCATTACCGTGATAACGCCATCGCCTACAAAGAACAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGAGATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCGAAAGCTGAAAATGATGCTCTGCGTGATGATGTTGCCGCTGGTCGTCGTCGGTTGCACATCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCCGGGAACGACTGGTAATGATGCAGGCCCAACTTGAAGGTGCTCAGCAATACATAACCGAGCAGTGTTTAAAGTAA", - "dna_sequence_length": 444, - "id": "CDS_1350", - "location": [ - [ - "NC_000913", - 1423201, - 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"ATGCGAAAGCTGAAAATGATGCTCTGCGTGATGATGTTGCCGCTGGTCGTCGTCGGTTGCACATCAAAGCAGTCTGTCAGTCAGTGCGTGAAGCCACCACCGCCTCCGGCGTGGATAATGCAGCCTCCCCCCGACTGGCAGACACCGCTGAACGGGATTATTTCACCCTCCGGGAACGACTGGTAA", - "dna_sequence_length": 186, - "functions": [ - "Rac prophage", - "putative lipoprotein" - ], - "id": "CDS_1351", - "location": [ - [ - "NC_000913", - 1423400, - "+", - 186 - ] - ], - "md5": "56555959036e41302e7e2daa2db0c382", - "parent_gene": "", - "protein_md5": "488475db8db7a0f06e71dd627ad1b189", - "protein_translation": "MRKLKMMLCVMMLPLVVVGCTSKQSVSQCVKPPPPPAWIMQPPPDWQTPLNGIISPSGNDW", - "protein_translation_length": 61, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "trkG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23849" - ], - [ - "gene_synonym", - "ASAP:ABE-0004567" - ], - [ - "gene_synonym", - "JW1358" - ], - [ - "gene_synonym", - "b1363" - ], - [ - "gene_synonym", - "GI:16129324" - ], - [ - "gene_synonym", - "EcoGene:EG11020" - ], - [ - "gene_synonym", - 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"ATGAATACATCTCATGTAAGAGTTGTTACTCATATGTGTGGGTTCCTGGTTTGGCTCTATAGTCTTTCAATGTTGCCACCAATGGTTGTAGCATTGTTTTATAAAGAAAAAAGCCTGTTTGTTTTCTTTATAACTTTCGTTATATTTTTTTGCATTGGTGGCGGAGCGTGGTATACAACTAAGAAATCTGGCATTCAATTACGTACCCGTGATGGGTTTATTATAATTGTAATGTTTTGGATTTTGTTTTCTGTTATTAGTGCATTCCCTTTATGGATTGACTCAGAACTTAATTTAACGTTCATTGATGCTCTGTTTGAAGGGGTTTCTGGAATAACAACAACAGGAGCAACTGTAATTGATGATGTTAGTTCATTACCTCGGGCATATTTGTACTATCGGTCACAGTTAAATTTTATAGGTGGTTTAGGAGTTATTGTTCTGGCGGTTGCTGTATTGCCATTATTGGGTATTGGTGGTGCAAAGCTTTATCAGTCAGAAATGCCGGGGCCATTTAAGGATGACAAACTCACTCCCCGCCTGGCCGATACGTCACGGACACTGTGGATAACTTATTCTTTATTAGGTATTGCTTGTATTGTCTGTTATAGACTTGCAGGAATGCCTTTGTTTGATGCTATTTGTCACGGGATTTCCACAGTTTCGCTTGGTGGTTTCTCAACTCATAGCGAGAGTATCGGATATTTTAATAACTATTTGGTTGAGCTGGTGGCTGGTTCTTTTTCCCTGCTATCGGCTTTCAACTTCACTCTTTGGTATATTGTTATTAGCAGGAAAACGATAAAACCTTTAATCAGAGATATTGAACTTCGTTTCTTTCTGTTAATAGCCTTAGGGGTGATCATTGTTACCTCTTTCCAGGTCTGGCATATAGGTATGTATGACTTGCATGGAAGTTTTATTCATTCGTTTTTTCTTGCCAGCTCCATGCTCACTGATAATGGTTTAGCTACGCAGGATTATGCAAGTTGGCCCACGCACACGATAGTGTTTTTGCTGTTGTCAAGTTTCTTTGGGGGATGTATAGGTTCAACTTGTGGTGGAATTAAGTCACTTCGATTTCTTATACTTTTCAAACAAAGCAAACACGAGATAAATCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGATCGTGTAATGAGGTCTGTATGGAGTTTCTTTTTTCTTTATACTCTCTTCACGGTGTTTTTTATACTGGTGTTAAATGGTATGGGATATGATTTTCTTACATCATTTGCAACAGTGGCTGCATGTATTAATAATATGGGATTAGGTTTTGGGGCTACTGCATCGTCATTCGGAGTGCTTAATGACATTGCAAAATGCTTAATGTGCATAGCTATGATTCTTGGTCGCCTTGAAATTTATCCTGTTATTATATTGTTTTCAGGTTTTTTTTGGCGCTCCTAA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P76068" - ], - [ - "gene_synonym", - "ynaK" - ], - [ - "gene_synonym", - "EcoGene:EG14296" - ], - [ - "gene_synonym", - "JW1359" - ], - [ - "gene_synonym", - "GeneID:947417" - ], - [ - "gene_synonym", - "b1365" - ], - [ - "gene_synonym", - "GI:16129326" - ], - [ - "gene_synonym", - "ECK1363" - ] - ], - "dna_sequence": "ATGAGCGAGAAATTAAAGATAGTCTATCGCCCATTACAAGAATTGTCACCGTATGCGCACAACGCCAGGACGCACAGTACTGAGCAGGTGGCACAACTGGTAGAAAGTATTAAGCAATTCGGCTGGACTAATCCGGTGCTGATTGACGAAAAGGGCGAAATTATTGCGGGTCACGGTCGTGTTATGGCGGCTGAAATGCTCAAAATGGATTCTGTTCCGGTCATTGTTCTGTCTGGCCTGACGGATGAGCAGAAGCAGCGATAA", - "dna_sequence_length": 264, - "functions": [ - "Rac prophage", - "conserved protein" - ], - "id": "CDS_1353", - "location": [ - [ - "NC_000913", - 1425377, - "+", - 264 - ] - ], - "md5": "06ddd573b3555d8309457378359208f2", - "parent_gene": "", - "protein_md5": "630d4fac5ca8ccb308e5d7908cfa01a1", - "protein_translation": "MSEKLKIVYRPLQELSPYAHNARTHSTEQVAQLVESIKQFGWTNPVLIDEKGEIIAGHGRVMAAEMLKMDSVPVIVLSGLTDEQKQR", - "protein_translation_length": 87, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76069" - ], - [ - "gene_synonym", - "ASAP:ABE-0004574" - ], - [ - "gene_synonym", - "JW1360" - ], - [ - "gene_synonym", - "EcoGene:EG13367" - ], - [ - "gene_synonym", - "GeneID:946208" - ], - [ - "gene_synonym", - "b1366" - ], - [ - "gene_synonym", - "ydaY" - ], - [ - "gene_synonym", - "ECK1364" - ] - ], - "dna_sequence": "AGCAGCGATAACGATCAGTATCGCTCCCGTAATGCATTAATCCGTCGCCACATTGAGAAAATGGATGCCAGTTTGCACGTCGGAACGAAGGAGTTTGATATTTCAAAGGTTTCCGAGGTGGATTCTGTTGATGATTTACTCATTGATAATGCCGCTCGTTATCTGCTGAAAGACTGGAAAGGGGTTGGTGAACTGGTTAATGGTGTTGAGGTTGCACTGGAATATACGGCAGAACGAGGGATCGCGCTGCTTAAGCAGAATCCAGAGTTGTACTGGCAGATCCTTGCAGAAGCAGCCAGCATCGCCCAGGGTAAAGAGCAGCAGAAGCAGGATACGATAAAAAAGCCATAGCTGCCCAGCGGTGGTTATCGGAGTTCGGGGGAGAAAGGGGGGAAAAGGCAAGATGGAAGCGAGAAAAACTCAGGTTGCCACCGATACCGGAACCAGAAATAG", - 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"ATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGACTAAGGCAACAGAAGATGAGAAGAACGCGCTCGCAAAATTAAAAGCAGCTATTGATCCAGTTGGTGCCGCAATTGATACTGTCGGTCGACGCTATTCTGAATTAAAGAAATTTTTCGATAAAGGGCTTATTGATAAAGAAGAATATGAATTTCTTGTCCGTAAACTTAATGAAACCACAGAGGAATTGAGCGGGGTTGCGCAAGCGCAGAGAGAAGCCGAGAAGGCCGGAAAACTTGCTGCCGCTCAGCAGGAAGCGCAGGCTCAGGCCTTTCAAAGAATGCTGGACAAGATCGACCCTCTGGCTGCGGCGCTAAGAAATCTTGAACAACAGCATGATGAACTTAATGCTGCGTTTGCATCCGGGAAAATAAATGGTTCTCAGTTTGAGAATTATAGCCGAAAAATACAGGAAACACGGCGAGAGCTTACCGGAGAGGCTCAGGCAGAGCGAGAAGCAGCAAAAGCGCATGATGAACAGGTTGTTGCTTTGCAACGTCTGATTGCTCAACTTGATCCTGTCGGAACTGCTTTTAATCGTCTGGTAGAACAACAGAAACAGCTCAATGAAGCAAAAGCTAAGGGGATGCTTTCTCCTGAAATGTATGAGGAGCTTTCTGGAAAACTTCGTGCTATGCGGAGTGAGCTTGAGGTTACTCAATCACAATTAAGCAAAACCGGAATGTCGGCAAAACAAACGGCTTTTGCTATGCGCATGTTGCCTGCACAAATGACGGATATTGTTGTTGGGTTGTCCACTGGTCAGTCGCCATTTATGGTGTTAATGCAGCAGGGCGGC", - "dna_sequence_length": 933, - "id": "CDS_1355", - "location": [ - [ - "NC_000913", - 1426454, - "+", - 933 - ] - ], - "md5": "ed93f9016291f3f3dd1eaec249756acf", - "parent_gene": "", - "protein_md5": "b8337c6fa6716ab9bc3e4e1e57200d55", - "protein_translation": "MAEQTSRLAIIIDSTGAKNNADNLTSSLVKMTQAGETAANSAGKVTKATEDEKNALAKLKAAIDPVGAAIDTVGRRYSELKKFFDKGLIDKEEYEFLVRKLNETTEELSGVAQAQREAEKAGKLAAAQQEAQAQAFQRMLDKIDPLAAALRNLEQQHDELNAAFASGKINGSQFENYSRKIQETRRELTGEAQAEREAAKAHDEQVVALQRLIAQLDPVGTAFNRLVEQQKQLNEAKAKGMLSPEMYEELSGKLRAMRSELEVTQSQLSKTGMSAKQTAFAMRMLPAQMTDIVVGLSTGQSPFMVLMQQGG", - "protein_translation_length": 311, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:4056036" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77184" - ], - [ - "gene_synonym", - "JW5904" - ], - [ - "gene_synonym", - "ASAP:ABE-0004590" - ], - [ - "gene_synonym", - "ASAP:ABE-0004583" - ], - [ - "gene_synonym", - "b4570" - ], - [ - "gene_synonym", - "JW5884" - ], - [ - "gene_synonym", - "lomR" - ], - [ - "gene_synonym", - "ECK1366" - ], - [ - "gene_synonym", 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}, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG40008" - ], - [ - "gene_synonym", - "NP_415888.1" - ], - [ - "gene_synonym", - "b1370" - ], - [ - "gene_synonym", - "ASAP:ABE-0004586" - ], - [ - "gene_synonym", - "GI:16129331" - ], - [ - "gene_synonym", - "GeneID:945944" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CE53" - ], - [ - "gene_synonym", - "insH1" - ], - [ - "gene_synonym", - "ECK0261" - ] - ], - "dna_sequence": "ATGAGCCATCAACTCACCTTCGCCGATAGTGAATTCAGCACTAAGCGCCGTCAGACCCGAAAAGAGATTTTCCTCTCCCGCATGGAGCAGATTCTGCCATGGCAGAATATGACCGCTGTCATCGAGCCGTTTTATCCCAAGGCGGGCAATGGCCGACGGCCCTATCCGCTGGAGACCATGCTGCGTATTCACTGCATGCAGCATTGGTACAACCTGAGCGACGGTGCCATGGAAGATGCCCTGTACGAAATCGCCTCCATGCGCCTGTTTGCCCGATTATCCCTGGATAGCGCCCTGCCGGATCGCACCACCATCATGAATTTCCGCCACCTGCTCGAGCAGCATCAACTGGCCCGTCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACCCAAGGCACTTTGGTGGATGCCACCATCATTGAGGCACCCAGCTCTACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTTCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGAGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGTCCCGGCAAGGTAAAAACCTTGAAGCAGAATCCGCGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGTGCCAGGGTGGAGCACCCGTTTCGCATCATCAAGCGGCAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGCTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACCCTGGCCAACCTGTTTCGGGTGGACCAAATGATACGTCAGTGGGAGAGATCTCAGTAA", - 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"stfR" - ], - [ - "gene_synonym", - "GI:90111261" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76072" - ], - [ - "gene_synonym", - "ECK1367" - ], - [ - "gene_synonym", - "EcoGene:EG13370" - ] - ], - "dna_sequence": "ATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTACAGAACTGCACAATCCAGCTGAAAGCAAAACGTAACAGCACCACGGTGGTGGTGAACACGCTGGCCTCAGAAAATCCGGATGAAGCCGGGCGTTACAGCATGGACGTTGAGTACGGTCAGTACAGCGTTATTCTGTTGGTGGAAGGATTCCCGCCGTCACATGCCGGGACCATTACCGTGTATGAAGATTCTCAACCCGGTACGCTGAATGATTTTCTCGGTGCCATGACGGAGGATGATGCCCGTCCGGAGGCACTGCGCCGTTTTGAACTGATGGTGGAAGAGGTGGCGCGTAACGCGTCCGCGGTGGCACAGAACACGGCAGCCGCGAAGAAGTCAGCCAGTGATGCCAGCACATCAGCCCGTGAGGCGGCAACCCATGCGGCTGATGCTGCGGACTCAGCACGCGCAGCCAGCACGTCAGCCGGACAGGCCGCGTCGTCGGCTCAGTCAGCGTCTTCCAGCGCAGGAACGGCATCAACAAAGGCCACTGAAGCATCAAAAAGTGCTGCCGCTGCAGAGTCCTCAAAAAGCGCGGCGGCCACCAGTGCCGGTGCGGCGAAAACGTCAGAAACGAATGCTTCAGCGTCACTACAATCAGCAGCCACATCTGCATCCACCGCGACCACGAAGGCATCAGAAGCTGCGACCTCGGCCCGGGATGCGGCGGCCTCAAAAGAAGCGGCAAAATCATCAGAAACGAACGCATCATCAAGCGCCAGTAGTGCAGCTTCCTCGGCAACGGCGGCAGGAAATTCCGCGAAGGCGGCAAAAACGTCCGAGACGAACGCCAGGTCTTCTGAAACGGCAGCGGGACAGAGCGCCTCGGCTGCGGCAGGCTCAAAAACAGCGGCTGCGTCGTCTGCCAGTGCAGCGTCAACAAGTGCCGGGCAGGCCTCAGCCAGTGCCACCGCCGCCGGAAAATCGGCAGAAAGCGCCGCATCGTCTGCTTCAACAGCCACAACGAAGGCTGGCGAAGCCACTGAACAGGCCAGCGCAGCAGCGAGGTCTGCTTCCGCAGCGAAGACATCCGAAACGAACGCGAAAGCGTCGGAAACAAGCGCAGAATCCTCAAAAACGGCTGCCGCATCGTCAGCCAGTTCGGCGGCGTCATCGGCATCATCGGCGTCTGCTTCAAAAGATGAGGCGACCAGACAAGCGTCAGCAGCGAAGAGCAGCGCCACGACGGCATCCACGAAGGCGACAGAGGCTGCTGGCAGTGCGACGGCGGCAGCTCAGAGCAAAAGTACGGCGGAATCCGCGGCAACGCGCGCCGAGACAGCAGCTAAACGGGCAGAGGATATTGCATCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGCAGTGCGACCAACAGTACGTCTGAAACGCTGGCGGCAACGCCAAAGGCAGTAAAATCAGCCTATGACAATGCAGAGAAACGTCTGCAGAAAGACCAGAACGGCGCTGATATACCCGATAAGGGATGCTTCCTGAACAACATTAACGCGGTCAGTAAAACAGACTTTGCTGATAAGCGTGGTATGCGTTATGTGCGGGTTAACGCTCCTGCAGGTGCAACATCTGGAAAATATTACCCTGTTGTTGTTATGCGTTCTGCTGGCTCAGTAAGCGAACTGGCATCAAGAGTCATTATCACCACGGCAACGCGAACCGCAGGCGATCCGATGAATAACTGCGAGTTTAACGGATTTGTTATGCCTGGTGGCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGGCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAGTAATAAGGGCGATGATTTGCGCTCTGTGTTCTATGTTGATGGCGCTGCTTTCCCTGTTTTTGCGTTTATTGAAGATGGCCTGTCAATATCCGCACCTGGTGCTGATCTCGTTGTTAATGATACGACCTATAAGTTTGGGGCAACAAATCCGGCGACTGAATGTATCGCGGCGGACGTTATCCTTGATTTTAAGAGTGGGCGTGGTTTTTATGAGTCTCATTCGTTAATCGTTAACGATAACTTGTCGTGCAAAAAACTTTTTGCCACAGACGAAATTGTAGCGCGTGGTGGTAATCAGATTCGAATGATAGGTGGGGAGTATGGTGCATTATGGCGTAATGATGGCGCTAAAACTTACCTGCTGCTTACCAATCAAGGTGATGTTTATGGTGGCTGGAATACATTAAGACCGTTTGCTATTGATAACGCAACCGGCGAACTGGTTATTGGAACCAAACTGTCCGCAAGTCTGAACGGTAATGCATTAACAGCAACAAAGCTGCAAACGCCAAGACGGGTTTCTGGTGTTGAGTTTGATGGTTCCAAAGATATTACTTTAACCGCCGCGCATGTGGCTGCTTTTGCCAGAAGGGCAACGGATACATATGCCGATGCGGATGGTGGCGTTCCATGGAATGCCGAATCTGGCGCTTACAATGTCACCCGCTCTGGCGACAGCTATATTCTGGTTAACTTCTATACCGGAGTCGGAAGTTGCCGGACCCTGCAGATGAAGGCGCATTACAGAAATGGTGGTCTGTTCTACCGTTCTTCAAGAGACGGTTATGGTTTTGAGGAAGACTGGGCAGAAGTTTATACCTCGAAAAATCTTCCACCAGAAAGCTACCCAGTCGGCGCACCAATCCCGTGGCCATCAGATACCGTTCCGTCTGGTTATGCCCTGATGCAGGGGCAGGCTTTTGACAAATCTGCTTACCCGAAACTTGCAGCCGCTTATCCGTCAGGCGTGATCCCTGATATGCGTGGCTGGACGATTAAGGGCAAACCTGCCAGTGGTCGGGCCGTATTGTCTCAGGAACAGGACGGCATTAAATCGCATACCCACAGCGCCAGCGCATCCAGTACAGATTTGGGGACGAAAACCACATCGTCGTTTGATTACGGCACTAAATCCACGAATAACACCGGGGCACATACACACAGTGTGAGCGGCTCTACAAACTCGGCTGGAGCACACACACACTCACTAGCCAACGTGAACACGGCTAGTGCTAACTCCGGTGCTGGTAGTGCATCAACAAGATTGTCTGTTGTGCATAATCAAAACTATGCAACATCATCTGCTGGCGCACATACCCACTCACTGTCCGGCACTGCTGCAAGCGCAGGTGCACACGCGCATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCATCACCGTTAACGCTGCTGGTAACGCGGAAAACACCGTCAAAAACATCGCATTTAACTATATTGTGAGGCTTGCATAA", 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"MAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMTEDDARPEALRRFELMVEEVARNASAVAQNTAAAKKSASDASTSAREAATHAADAADSARAASTSAGQAASSAQSASSSAGTASTKATEASKSAAAAESSKSAAATSAGAAKTSETNASASLQSAATSASTATTKASEAATSARDAAASKEAAKSSETNASSSASSAASSATAAGNSAKAAKTSETNARSSETAAGQSASAAAGSKTAAASSASAASTSAGQASASATAAGKSAESAASSASTATTKAGEATEQASAAARSASAAKTSETNAKASETSAESSKTAAASSASSAASSASSASASKDEATRQASAAKSSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAKRAEDIASAVALEDASTTKKGIVQLSSATNSTSETLAATPKAVKSAYDNAEKRLQKDQNGADIPDKGCFLNNINAVSKTDFADKRGMRYVRVNAPAGATSGKYYPVVVMRSAGSVSELASRVIITTATRTAGDPMNNCEFNGFVMPGGWTDRGRYAYGMFWQYQNNERAIHSIMMSNKGDDLRSVFYVDGAAFPVFAFIEDGLSISAPGADLVVNDTTYKFGATNPATECIAADVILDFKSGRGFYESHSLIVNDNLSCKKLFATDEIVARGGNQIRMIGGEYGALWRNDGAKTYLLLTNQGDVYGGWNTLRPFAIDNATGELVIGTKLSASLNGNALTATKLQTPRRVSGVEFDGSKDITLTAAHVAAFARRATDTYADADGGVPWNAESGAYNVTRSGDSYILVNFYTGVGSCRTLQMKAHYRNGGLFYRSSRDGYGFEEDWAEVYTSKNLPPESYPVGAPIPWPSDTVPSGYALMQGQAFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGSTNSAGAHTHSLANVNTASANSGAGSASTRLSVVHNQNYATSSAGAHTHSLSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA", - "protein_translation_length": 1120, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1367" - ], - [ - "gene_synonym", - "GeneID:946062" - ], - [ - "gene_synonym", - "GI:16129334" - ], - [ - "gene_synonym", - "b1373" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77163" - ], - [ - "gene_synonym", - "ynaC" - ], - [ - "gene_synonym", - "NP_415891.1" - ], - [ - "gene_synonym", - "ECK1368" - ], - [ - "gene_synonym", - "tfaR" - ], - [ - "gene_synonym", - "EcoGene:EG13371" - ], - [ - "gene_synonym", - "ASAP:ABE-0004597" - ] - ], - "dna_sequence": "ATGGCATTCAGAATGAGTGAACAACCACGGACCATAAAAATTTATAATCTGCTGGCCGGAACTAATGAATTTATTGGTGAAGGTGATGCATATATTCCGCCTCATACAGGTCTGCCAGCAAACAGTACCGATATTGCACCGCCAGATATTCCGGCTGGCTTCGTGGCTGTTTTCAACAGTGATGAGTCATCGTGGCATCTCGTTGAAGATCATCGGGGTAAAACGGTTTATGACGTGGCTTCCGGCAACGCGTTATTTATTTCTGAACTCGGTCCGTTACCGGAAAATGTTACCTGGTTATCGCCGGAAGGGGAGTTTCAGAAGTGGAACGGCACAGCCTGGGTGAAGGATACGGAAGCAGAAAAACTGTTCCGGATCCGGGAGGCGGAAGAAACAAAAAACAACCTGATGCAGGTAGCCAGTGAGCATATTGCGCCGCTTCAGGATGCTGCAGATCTGGAAATTGCAACGGAGGAAGAAATCTCGTTGCTGGAAGCATGGAAAAAGTATCGGGTATTGCTGAACCGTGTTGATACGTCAACTGCACAGGATATTGAATGGCCAGCACTGCCGTAG", - "dna_sequence_length": 576, - "functions": [ - "Rac prophage", - "putative tail fiber assembly protein" - ], - "id": "CDS_1359", - "location": [ - [ - "NC_000913", - 1432411, - "+", - 576 - ] - ], - "md5": "186b8344de87b1e95dec9ace22a580a2", - "parent_gene": "", - "protein_md5": "d4e1941843cc506896cb4cc8ff3c2129", - "protein_translation": "MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGNALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTSTAQDIEWPALP", - "protein_translation_length": 191, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADI0" - ], - [ - "gene_synonym", - "ASAP:ABE-0004599" - ], - [ - "gene_synonym", - "EcoGene:EG13372" - ], - [ - "gene_synonym", - "GI:16129335" - ], - [ - "gene_synonym", - "ynaD" - ], - [ - "gene_synonym", - "JW1368" - ], - [ - "gene_synonym", - "b1374" - ], - [ - "gene_synonym", - "NP_415892.1" - ], - [ - "gene_synonym", - "ECK1369" - ], - [ - "gene_synonym", - "pinR" - ], - [ - "gene_synonym", - "GeneID:948973" - ] - ], - "dna_sequence": "ATGTCTCGAATTTTTGCTTACTGTCGGATATCAACGCTGGATCAGACCACCGAAAATCAACGCCGGGAAATCGAAAGTGCAGGTTTTAAAATCAAACCTCAGCAAATAATCGAAGAACACATTAGCGGCTCAGCAGCAACCAGTGAGCGTCCTGGTTTTAACCGGTTGCTTGCTCGCCTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGGTGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCTCCTGTGTTAAATGAAGAACAGAAACAGGTGGTATTCGAACGAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGACACCTGACATATAA", - "dna_sequence_length": 591, - "functions": [ - "Rac prophage", - "putative site-specific recombinase" - ], - "id": "CDS_1360", - "location": [ - [ - "NC_000913", - 1433674, - "-", - 591 - ] - ], - "md5": "6c09218dddcfab8495b072b24731f14e", - "parent_gene": "", - "protein_md5": "eccf7a81c8bf1df92f290f9145834d8d", - "protein_translation": "MSRIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13373" - ], - [ - "gene_synonym", - "GeneID:946078" - ], - [ - "gene_synonym", - "ASAP:ABE-0004602" - ], - [ - "gene_synonym", - "ynaE" - ], - [ - "gene_synonym", - "JW1369" - ], - [ - "gene_synonym", - "b1375" - ], - [ - "gene_synonym", - "ECK1370" - ], - [ - "gene_synonym", - "GI:345452718" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76073" - ], - [ - "gene_synonym", - "NP_415893.2" - ] - ], - "dna_sequence": "ATGAAATCAAAAGACACCCTAAAGTGGTTCCCTGCGCAGCTTCCTGAAGTAAGAATTATCCTAGGGGATGCTGTAGTGGAAGTAGCAAAACAGGGAAGACCTATCAATACCAGAACATTGCTTGATTACATTGAAGGAAACATAAAGAAAACATCATGGCTGGATAACAAAGAATTATTACAAACAGCGATATCAGTTCTTAAAGACAACCAAAATTTAAATGGTAAAATGTAA", - "dna_sequence_length": 234, - "functions": [ - "cold shock protein, Rac prophage" - ], - "id": "CDS_1361", - "location": [ - [ - "NC_000913", - 1434224, - "-", - 234 - ] - ], - "md5": "da8bdff89cc540676feaeb0c3153d041", - "parent_gene": "", - "protein_md5": "c6a48fbd57c6ce0fd88a37e13aa719da", - "protein_translation": "MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKTSWLDNKELLQTAISVLKDNQNLNGKM", - "protein_translation_length": 77, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14435" - ], - [ - "gene_synonym", - "GeneID:5625564" - ], - [ - "gene_synonym", - "ECK4447" - ], - [ - "gene_synonym", - "b4638" - ], - [ - "gene_synonym", - "ttcC" - ] - ], - "dna_sequence": "ATGTCGCAAAATCAAGAAATTAGTAAGAAAGAACAATACAACCTGAACAAG", - "dna_sequence_length": 51, - "id": "CDS_1362", - "location": [ - [ - "NC_000913", - 1435008, - "-", - 51 - ] - ], - "md5": "7e3e6fafe2c11882751eff454705e738", - "parent_gene": "", - "protein_md5": "ceb6fc408a59c3961b6e918e7fbaa678", - "protein_translation": "MSQNQEISKKEQYNLNK", - "protein_translation_length": 17, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12674" - ], - [ - "gene_synonym", - "GeneID:945948" - ], - [ - "gene_synonym", - "JW1370" - ], - [ - "gene_synonym", - "ynaF" - ], - [ - "gene_synonym", - "NP_415894.4" - ], - [ - "gene_synonym", - "b1376" - ], - [ - "gene_synonym", - "ECK1371" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37903" - ], - [ - "gene_synonym", - "yzzL" - ], - [ - "gene_synonym", - "GI:90111262" - ], - [ - "gene_synonym", - "ASAP:ABE-0004605" - ], - [ - "gene_synonym", - "uspF" - ] - ], - "dna_sequence": "ATGAACAGAACGATTCTTGTCCCTATCGATATTTCCGATTCAGAATTAACTCAACGCGTGATTAGCCACGTTGAGGAAGAGGCAAAGATTGATGATGCAGAGGTTCATTTCCTGACGGTAATACCTTCACTGCCCTACTATGCCTCTCTGGGTTTAGCGTATTCCGCAGAATTACCGGCAATGGATGACCTGAAAGCGGAAGCCAAATCGCAACTGGAAGAGATCATTAAAAAATTTAAACTGCCAACCGACAGAGTGCATGTCCATGTTGAGGAAGGCTCGCCCAAAGACCGCATTCTGGAATTGGCGAAGAAGATCCCCGCTCATATGATCATCATTGCTTCCCATCGACCGGATATCACCACTTATCTGCTCGGTTCCAACGCCGCAGCTGTAGTGCGTCACGCAGAGTGCTCCGTGCTGGTTGTGCGCTGA", - "dna_sequence_length": 435, - "functions": [ - "stress-induced protein, ATP-binding protein" - ], - "id": "CDS_1363", - "location": [ - [ - "NC_000913", - 1435619, - "-", - 435 - ] - ], - "md5": "6cb68e61ce2bd0eb43a1098a7105afa9", - "parent_gene": "", - "protein_md5": "c540cf026cfa9db396bbab069be25221", - "protein_translation": "MNRTILVPIDISDSELTQRVISHVEEEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR", - "protein_translation_length": 144, - "type": "CDS" - }, - { - "aliases": [ - [ 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"ATGAAAAGCAAAGTACTGGCACTTTTAATTCCTGCCCTGCTCGCCGCAGGTGCTGCACATGCAGCCGAAGTTTATAATAAAGACGGCAACAAATTAGATCTGTATGGCAAAGTTGATGGCCTGCATTATTTTTCTGATAATTCAGCGAAAGATGGCGACCAGAGCTATGCGCGTCTGGGTTTTAAAGGCGAAACCCAAATTAACGATCAACTCACTGGCTACGGTCAATGGGAATACAATATTCAGGCAAACAACACTGAATCTTCAAAAAACCAGTCATGGACCCGTCTGGCATTTGCCGGGCTGAAATTTGCAGATTACGGTTCTTTCGATTACGGACGTAATTATGGCGTAATGTACGACATCGAAGGCTGGACCGATATGCTGCCTGAATTTGGCGGTGACTCTTATACCAATGCAGACAACTTTATGACTGGTCGAGCCAATGGCGTCGCGACTTATCGTAATACTGATTTCTTCGGTCTGGTAAATGGTCTGAACTTCGCGGTGCAGTATCAAGGTAACAACGAAGGAGCCAGTAATGGTCAGGAAGGCACCAACAACGGACGTGATGTTCGCCATGAAAACGGTGACGGCTGGGGTCTTTCCACAACATATGATTTAGGCATGGGCTTTAGCGCTGGTGCGGCATACACCTCTTCTGACCGCACCAATGACCAGGTTAACCATACTGCGGCGGGTGGTGATAAAGCAGACGCGTGGACTGCTGGGCTAAAATACGATGCTAACAATATTTACCTGGCAACCATGTATTCAGAAACGCGTAATATGACCCCGTTTGGCGACAGCGATTATGCTGTGGCAAACAAAACCCAGAATTTTGAAGTCACTGCACAGTACCAGTTTGATTTTGGTCTGCGTCCGGCAGTCTCTTTCCTGATGTCTAAAGGCCGTGACCTGCACGCTGCGGGTGGTGCAGACAACCCGGCAGGTGTTGATGATAAAGATCTGGTTAAATACGCCGATATTGGCGCGACTTACTATTTCAATAAAAACATGTCCACCTACGTTGACTATAAAATCAACCTGTTGGATGAAGATGACAGCTTCTACGCTGCCAATGGCATCTCTACCGATGATATTGTCGCTTTAGGTCTGGTTTATCAGTTCTAA", 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"gene_synonym", - "ydbK" - ], - [ - "gene_synonym", - "pfo" - ], - [ - "gene_synonym", - "EcoGene:EG13183" - ], - [ - "gene_synonym", - "ASAP:ABE-0004613" - ], - [ - "gene_synonym", - "ECK1374" - ], - [ - "gene_synonym", - "soi-9" - ], - [ - "gene_synonym", - "NP_415896.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52647" - ] - ], - "dna_sequence": "ATGATTACTATTGACGGTAATGGCGCGGTTGCTTCGGTCGCATTTCGCACCAGTGAAGTTATCGCCATCTACCCTATTACCCCCAGTTCCACGATGGCAGAACAGGCTGATGCCTGGGCCGGAAACGGCTTAAAGAACGTTTGGGGAGACACACCACGCGTGGTTGAAATGCAGTCGGAAGCGGGTGCTATCGCTACCGTGCATGGCGCTTTGCAGACGGGTGCCCTTTCAACATCGTTTACGTCATCGCAGGGTTTGCTGCTGATGATCCCGACGCTGTACAAACTGGCAGGCGAACTAACACCGTTTGTCCTGCATGTAGCGGCACGTACCGTTGCCACACATGCACTCTCTATTTTTGGCGATCATTCCGACGTTATGGCGGTGCGCCAGACGGGTTGCGCGATGTTGTGTGCAGCAAACGTCCAGGAAGCGCAAGACTTTGCTCTCATTTCGCAAATCGCGACGCTGAAAAGCCGCGTGCCATTTATTCATTTCTTTGATGGTTTCCGCACGTCCCACGAAATCAATAAAATTGTCCCGCTGGCCGATGACACGATTCTTGATCTCATGCCGCAGGTCGAAATTGATGCTCATCGCGCCCGGGCACTCAACCCGGAACATCCGGTGATCCGCGGTACGTCCGCCAATCCTGACACTTATTTCCAGTCTCGCGAAGCCACCAACCCATGGTACAACGCGGTCTATGACCATGTTGAACAGGCGATGAATGATTTCTCTGCCGCGACAGGTCGTCAGTATCAGCCGTTTGAATATTACGGGCATCCGCAAGCGGAACGGGTGATTATCCTGATGGGCTCTGCCATTGGCACCTGTGAAGAAGTGGTTGATGAATTGCTAACCCGTGGCGAAAAAGTTGGCGTGCTGAAAGTTCGCCTGTACCGCCCCTTCTCCGCTAAACATTTACTGCAAGCTCTGCCGGGATCCGTACGCAGCGTGGCGGTACTGGACAGAACCAAAGAACCCGGTGCCCAGGCAGAACCGCTCTATCTGGATGTAATGACCGCACTGGCAGAAGCCTTTAATAATGGCGAGCGCGAAACTCTGCCCCGTGTCATTGGTGGGCGCTATGGTCTTTCATCCAAAGAATTTGGCCCAGACTGTGTACTGGCGGTATTTGCCGAGCTCAACGCGGCTAAACCGAAAGCGCGCTTTACGGTTGGTATTTACGATGATGTGACCAATCTGTCACTGCCGTTGCCGGAAAACACCCTGCCAAACTCGGCGAAACTGGAAGCCTTGTTTTATGGCCTTGGTAGTGATGGCAGCGTTTCCGCGACCAAAAACAATATCAAGATTATCGGTAATTCCACGCCGTGGTACGCACAGGGCTATTTTGTTTACGACTCCAAAAAGGCGGGCGGCCTGACGGTTTCTCACCTTCGAGTGAGCGAACAGCCGATTCGTTCCGCTTATCTCATTTCCCAGGCTGATTTTGTTGGCTGCCACCAGTTGCAGTTTATCGATAAATATCAGATGGCTGAGCGTTTAAAACCTGGCGGCATTTTCCTGCTCAACACGCCGTACAGCGCAGATGAAGTGTGGTCGCGCTTGCCGCAAGAAGTTCAGGCCGTGTTAAACCAGAAAAAAGCGCGCTTCTATGTGATTAACGCGGCGAAAATCGCCCGCGAATGTGGCCTGGCGGCCCGTATTAATACCGTCATGCAGATGGCTTTTTTCCATCTGACGCAAATTCTGCCTGGCGATAGCGCCCTCGCAGAATTGCAGGGTGCGATTGCCAAAAGTTACAGTAGCAAAGGCCAGGATCTGGTGGAACGCAACTGGCAGGCTCTGGCGCTGGCGCGTGAATCCGTAGAAGAAGTTCCGTTGCAACCGGTAAATCCGCACAGCGCCAATCGACCGCCAGTGGTTTCCGATGCCGCCCCTGATTTCGTGAAAACCGTAACCGCTGCGATGCTCGCCGGGCTTGGTGACGCCCTCCCCGTTTCGGCGCTGCCGCCAGACGGCACCTGGCCGATGGGCACTACGCGCTGGGAAAAACGCAATATCGCCGAAGAGATCCCCATCTGGAAAGAGGAACTCTGTACCCAATGTAACCACTGCGTTGCCGCTTGCCCACACTCAGCTATTCGCGCAAAAGTGGTGCCGCCTGAAGCGATGGAAAACGCCCCTGCCAGCCTGCATTCGCTGGATGTGAAATCGCGTGATATGCGCGGGCAGAAATATGTCTTGCAGGTGGCACCGGAAGATTGCACCGGTTGTAACCTGTGCGTCGAAGTTTGCCCGGCGAAAGACCGTCAGAATCCAGAGATTAAAGCCATCAATATGATGTCTCGCCTGGAACATGTCGAAGAAGAGAAAATCAATTACGATTTCTTCCTCAACCTGCCAGAAATCGACCGTAGCAAACTGGAACGTATTGATATTCGTACATCGCAGCTGATTACACCGCTGTTTGAATATTCAGGTGCTTGCTCCGGTTGTGGCGAGACGCCGTATATTAAATTACTGACTCAGCTCTATGGCGACCGGATGTTGATCGCTAACGCCACTGGCTGTTCTTCAATTTATGGCGGTAACCTGCCCTCTACACCGTATACCACCGATGCCAACGGTCGTGGGCCGGCATGGGCGAACTCTCTATTTGAAGATAATGCCGAATTTGGCCTTGGTTTCCGCCTGACGGTCGATCAACACCGTGTCCGCGTGCTGCGTCTGCTGGATCAATTTGCCGATAAAATCCCGGCGGAATTACTGACGGCGTTGAAATCAGACGCCACGCCAGAGGTTCGTCGTGAACAGGTTGCAGCTTTACGCCAGCAACTCAACGATGTTGCCGAAGCACATGAACTGCTACGTGATGCAGATGCACTGGTGGAAAAATCAATCTGGCTGATTGGTGGTGATGGCTGGGCTTACGATATCGGCTTTGGCGGTCTGGATCATGTATTGAGTTTGACGGAAAACGTCAACATTCTGGTGCTGGATACGCAATGCTATTCCAACACCGGTGGTCAGGCGTCGAAAGCGACACCGCTGGGTGCAGTAACTAAATTTGGCGAGCACGGCAAACGTAAAGCGCGTAAAGATCTTGGCGTCAGTATGATGATGTACGGTCATGTTTATGTGGCGCAGATTTCTCTCGGCGCGCAGCTGAACCAGACGGTGAAAGCGATTCAGGAAGCGGAAGCGTATCCGGGGCCATCGCTGATCATTGCTTATAGCCCGTGTGAAGAGCATGGTTACGATCTGGCACTCAGCCACGACCAGATGCGCCAACTCACAGCTACCGGCTTCTGGCCGCTATATCGCTTTGATCCGCGTCGTGCCGATGAAGGCAAACTGCCGCTGGCCTTGGATTCACGCCCGCCGTCAGAAGCACCGGAAGAAACGTTACTTCACGAGCAACGTTTCCGTCGGCTGAATTCGCAGCAGCCAGAAGTGGCAGAACAGTTATGGAAAGATGCTGCAGCTGATTTGCAAAAACGCTATGACTTCCTGGCACAAATGGCCGGAAAAGCGGAAAAAAGCAACACCGATTAA", 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"MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSEAGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAANVQEAQDFALISQIATLKSRVPFIHFFDGFRTSHEINKIVPLADDTILDLMPQVEIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVEQAMNDFSAATGRQYQPFEYYGHPQAERVIILMGSAIGTCEEVVDELLTRGEKVGVLKVRLYRPFSAKHLLQALPGSVRSVAVLDRTKEPGAQAEPLYLDVMTALAEAFNNGERETLPRVIGGRYGLSSKEFGPDCVLAVFAELNAAKPKARFTVGIYDDVTNLSLPLPENTLPNSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEQPIRSAYLISQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVINAAKIARECGLAARINTVMQMAFFHLTQILPGDSALAELQGAIAKSYSSKGQDLVERNWQALALARESVEEVPLQPVNPHSANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIPIWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPASLHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKINYDFFLNLPEIDRSKLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRLLDQFADKIPAELLTALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLIGGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLALSHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSEAPEETLLHEQRFRRLNSQQPEVAEQLWKDAAADLQKRYDFLAQMAGKAEKSNTD", - "protein_translation_length": 1174, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:4056027" - ], - [ - "gene_synonym", - "ydbJ" - ], - [ - "gene_synonym", - "ASAP:ABE-0285050" - ], - [ - "gene_synonym", - "b4529" - ], - [ - "gene_synonym", - "EcoGene:EG13182" - ], - [ - "gene_synonym", - "YP_588453.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACW2" - ], - [ - "gene_synonym", - "ECK1375" - ], - [ - "gene_synonym", - "JW5215" - ], - [ - "gene_synonym", - "GI:94541111" - ] - ], - "dna_sequence": "ATGCGAGCAGCGTTTTGGGTAGGGTGTGCCGCTTTATTGTTGTCGGCGTGTAGTAGTGAACCTGTTCAGCAGGCGACTGCCGCGCACGTAGCGCCAGGTTTAAAAGCGTCGATGTCCAGTAGTGGAGAAGCAAATTGTGCAATGATCGGCGGTTCGCTTTCTGTTGCCCGTCAACTGGATGGTACGGCGATTGGGATGTGTGCATTACCCAACGGCAAACGCTGTAGCGAACAGTCACTTGCCGCCGGGAGCTGTGGCAGCTATTAA", - "dna_sequence_length": 267, - "functions": [ - "DUF333 family putative lipoprotein" - ], - "id": "CDS_1366", - "location": [ - [ - "NC_000913", - 1441058, - "+", - 267 - ] - ], - "md5": "9d507cd1e1fc711ecd71735949fd85df", - "parent_gene": "", - "protein_md5": "70ae7df1b964c15eb97ff2db11c457d1", - "protein_translation": "MRAAFWVGCAALLLSACSSEPVQQATAAHVAPGLKASMSSSGEANCAMIGGSLSVARQLDGTAIGMCALPNGKRCSEQSLAAGSCGSY", - "protein_translation_length": 88, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ydbI" - ], - [ - "gene_synonym", - "JW1374" - ], - [ - "gene_synonym", - "b1379" - ], - [ - "gene_synonym", - "GeneID:946525" - ], - [ - "gene_synonym", - "ASAP:ABE-0004616" - ], - [ - "gene_synonym", - "hslJ" - ], - [ - "gene_synonym", - "EcoGene:EG13181" - ], - [ - "gene_synonym", - "GI:16129340" - ], - [ - "gene_synonym", - "ECK1376" - ], - [ - "gene_synonym", - "NP_415897.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52644" - ] - ], - "dna_sequence": "ATGAAGAAAGTAGCCGCGTTTGTTGCGCTAAGCCTGCTGATGGCGGGATGTGTAAGTAATGACAAAATTGCTGTTACGCCAGAACAGCTACAGCATCATCGCTTTGTGCTGGAAAGCGTAAACGGTAAGCCCGTGACCAGCGATAAAAATCCGCCAGAAATCAGCTTTGGTGAAAAAATGATGATTTCCGGCAGCATGTGTAACCGCTTTAGCGGTGAAGGCAAACTGTCTAATGGTGAACTGACAGCCAAAGGGCTGGCAATGACCCGTATGATGTGCGCTAACCCGCAGCTTAATGAACTCGATAACACCATTAGCGAAATGCTGAAAGAAGGTGCACAAGTGGATCTGACCGCGAACCAGTTAACGCTGGCGACCGCAAAACAGACATTAACTTATAAGCTGGCGGATTTAATGAATTAA", - "dna_sequence_length": 423, - "functions": [ - "heat-inducible lipoprotein involved in novobiocin resistance" - ], - "id": "CDS_1367", - "location": [ - [ - "NC_000913", - 1441743, - "-", - 423 - ] - ], - "md5": "0a5b0de00e21d34ae148f778f25cf039", - "parent_gene": "", - "protein_md5": "a742fedb3e02d0abb3da07ddc4d939db", - "protein_translation": "MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKPVTSDKNPPEISFGEKMMISGSMCNRFSGEGKLSNGELTAKGLAMTRMMCANPQLNELDNTISEMLKEGAQVDLTANQLTLATAKQTLTYKLADLMN", - "protein_translation_length": 140, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13186" - ], - [ - "gene_synonym", - "JW1375" - ], - [ - "gene_synonym", - "hslF" - ], - [ - "gene_synonym", - "NP_415898.1" - ], - [ - "gene_synonym", - "hslI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52643" - ], - [ - "gene_synonym", - "GeneID:946315" - ], - [ - "gene_synonym", - "htpH" - ], - [ - "gene_synonym", - "ASAP:ABE-0004619" - ], - [ - "gene_synonym", - "GI:16129341" - ], - [ - "gene_synonym", - "ECK1377" - ], - [ - "gene_synonym", - "b1380" - ], - [ - "gene_synonym", - "ldhA" - ] - ], - "dna_sequence": "ATGAAACTCGCCGTTTATAGCACAAAACAGTACGACAAGAAGTACCTGCAACAGGTGAACGAGTCCTTTGGCTTTGAGCTGGAATTTTTTGACTTTCTGCTGACGGAAAAAACCGCTAAAACTGCCAATGGCTGCGAAGCGGTATGTATTTTCGTAAACGATGACGGCAGCCGCCCGGTGCTGGAAGAGCTGAAAAAGCACGGCGTTAAATATATCGCCCTGCGCTGTGCCGGTTTCAATAACGTCGACCTTGACGCGGCAAAAGAACTGGGGCTGAAAGTAGTCCGTGTTCCAGCCTATGATCCAGAGGCCGTTGCTGAACACGCCATCGGTATGATGATGACGCTGAACCGCCGTATTCACCGCGCGTATCAGCGTACCCGTGATGCTAACTTCTCTCTGGAAGGTCTGACCGGCTTTACTATGTATGGCAAAACGGCAGGCGTTATCGGTACCGGTAAAATCGGTGTGGCGATGCTGCGCATTCTGAAAGGTTTTGGTATGCGTCTGCTGGCGTTCGATCCGTATCCAAGTGCAGCGGCGCTGGAACTCGGTGTGGAGTATGTCGATCTGCCAACCCTGTTCTCTGAATCAGACGTTATCTCTCTGCACTGCCCGCTGACACCGGAAAACTATCATCTGTTGAACGAAGCCGCCTTCGAACAGATGAAAAATGGCGTGATGATCGTCAATACCAGTCGCGGTGCATTGATTGATTCTCAGGCAGCAATTGAAGCGCTGAAAAATCAGAAAATTGGTTCGTTGGGTATGGACGTGTATGAGAACGAACGCGATCTATTCTTTGAAGATAAATCCAACGACGTGATCCAGGATGACGTATTCCGTCGCCTGTCTGCCTGCCACAACGTGCTGTTTACCGGGCACCAGGCATTCCTGACAGCAGAAGCTCTGACCAGTATTTCTCAGACTACGCTGCAAAACTTAAGCAATCTGGAAAAAGGCGAAACCTGCCCGAACGAACTGGTTTAA", - 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- [ - "gene_synonym", - "ECK1378" - ], - [ - "gene_synonym", - "b1381" - ], - [ - "gene_synonym", - "ASAP:ABE-0004623" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52645" - ] - ], - "dna_sequence": "ATGCTGGGTAAATATAAAGCCGTTCTCGCGCTGTTATTACTGATTATTCTTGTGCCGTTGACGCTGCTGATGACGCTCGGGCTGTGGGTTCCCACGCTGGCGGGCATCTGGCTACCGCTCGGGACACGTATTGCATTAGATGAAAGCCCACGCATTACGCGTAAAGGTTTAATCATTCCCGATCTCCGTTATCTGGTGGGAGATTGTCAGCTTGCGCATATCACCAACGCCAGCCTTTCACATCCCAGCCGCTGGTTATTGAACGTCGGCACGGTAGAACTTGATTCTGCTTGTCTGGCGAAATTGCCGCAGACGGAGCAATCGCCAGCCGCTCCAAAAACACTCGCGCAGTGGCAGGCCATGCTGCCTAACACCTGGATCAATATCGATAAACTGATTTTTTCTCCCTGGCAGGAATGGCAGGGAAAACTCTCTCTCGCATTAACCTCTGATATCCAGCAACTGCGTTATCAGGGCGAAAAAGTTAAATTTCAAGGCCAGCTGAAAGGGCAACAACTTACAGTCAGCGAACTGGATGTCGTCGCGTTTGAAAATCAGCCGCCGGTAAAACTGGTGGGGGAATTTGCTATGCCGCTCGTGCCGGATGGACTTCCTGTAAGTGGGCATGCTACTGCGACGTTAAACTTGCCGCAGGAACCGTCACTGGTGGATGCCGAGCTGGACTGGCAGGAAAATAGCGGGCAATTGATCGTGCTGGCACGGGATAACGGCGATCCGTTGCTCGATTTGCCGTGGCAAATTACTCGTCAACAATTGACCGTAAGCGATGGTCGCTGGAGCTGGCCGTATGCAGGTTTTCCTTTGAGTGGCCGACTGGGTGTCAAAGTCGACAACTGGCAGGCAGGGCTTGAGAACGCTCTGGTCAGCGGACGACTGAGTGTGCTGACCCAGGGGCAAGCGGGTAAGGGCAACGCGGTGCTTAATTTTGGCCCAGGAAAATTAAGCATGGATAACAGTCAGCTGCCTCTGCAGCTGACCGGTGAAGCGAAACAGGCGGACCTCATTTTATATGCCCGTTTACCTGCGCAGCTAAGTGGAAGTCTGTCTGACCCAACGCTGACCTTTGAGCCAGGCGCGTTACTTCGTTCAAAGGGAAGAGTCATCGATTCGCTGGACATCGATGAAATCCGCTGGCCTTTAGCGGGTGTAAAAGTCACCCAACGTGGTGTTGACGGACGTTTGCAGGCCATCTTGCAGGCGCATGAAAATGAACTGGGCGATTTCGTGCTGCATATGGATGGGCTGGCGAATGATTTTCTCCCTGACGCTGGCCGCTGGCAGTGGCGCTACTGGGGAAAAGGGAGTTTTACACCGATGAATGCCACCTGGGATGTCGCAGGAAAAGGTGAGTGGCATGACAGCACGATTACGCTGACCGATCTCTCCACCGGTTTCGACCAGTTACAATACGGTACGATGACGGTAGAAAAGCCGCGATTAATTCTCGACAAGCCCATCGTCTGGGTACGTGACGCACAGCATCCCTCCTTTAGCGGCGCGCTGTCACTGGACGCCGGGCAAACGCTGTTCACTGGCGGCAGTGTGTTACCGCCATCAACCTTAAAATTTAGCGTCGATGGGCGCGATCCTACCTATTTCCTCTTTAAAGGCGATTTACATGCTGGTGAGATTGGCCCGGTTCGGGTAAATGGTCGCTGGGACGGTATTCGTCTGCGCGGTAACGCCTGGTGGCCTAAACAATCACTGACCGTATTCCAGCCGCTGGTGCCACCCGACTGGAAGATGAACTTACGCGATGGTGAACTGTATGCTCAGGTTGCATTTTCTGCTGCGCCTGAACAAGGATTCCGCGCGGGAGGACACGGCGTGTTGAAAGGCGGTAGTGCCTGGATGCCAGATAATCAGGTTAACGGTGTCGATTTTGTCCTGCCTTTCCGTTTTGCCGATGGAGCCTGGCATCTGGGGACTCGCGGCCCCGTTACGTTGCGAATTGCCGAAGTGATTAATCTGGTGACAGCGAAAAATATTACGGCTGATTTGCAAGGGCGTTATCCGTGGACTGAAGAAGAACCCTTGCTGTTGACTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTGAACAATGAAAAATGGATTGTGAAAGATGGCTGGCTGGCGAATAGCGGGCCGATGACATTGCGACTGGATAAAGACACTGCGGATGCGGTGGTAAAAGACAATATGACTGCGGGTTCAGCAATTAACTGGTTGCGCTATATGGAAATTAGCCGTTCATCGACAAAAATTAATTTAGATAATCTCGGTTTATTAACCATGCAGGCCAACATTACAGGTACCAGTCGCGTTGATGGTAAAAGCGGTACGGTAAACCTTAATTACCATCATGAAGAGAATATTTTTACGCTGTGGCGCAGTTTACGCTTTGGCGATAATCTCCAGGCATGGCTGGAGCAGAACGCACGTCTGCCGGGAAATGACTGTCCGCAAGGAAAAGAGTGTGAGGAAAAACAATGA", 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"MLGKYKAVLALLLLIILVPLTLLMTLGLWVPTLAGIWLPLGTRIALDESPRITRKGLIIPDLRYLVGDCQLAHITNASLSHPSRWLLNVGTVELDSACLAKLPQTEQSPAAPKTLAQWQAMLPNTWINIDKLIFSPWQEWQGKLSLALTSDIQQLRYQGEKVKFQGQLKGQQLTVSELDVVAFENQPPVKLVGEFAMPLVPDGLPVSGHATATLNLPQEPSLVDAELDWQENSGQLIVLARDNGDPLLDLPWQITRQQLTVSDGRWSWPYAGFPLSGRLGVKVDNWQAGLENALVSGRLSVLTQGQAGKGNAVLNFGPGKLSMDNSQLPLQLTGEAKQADLILYARLPAQLSGSLSDPTLTFEPGALLRSKGRVIDSLDIDEIRWPLAGVKVTQRGVDGRLQAILQAHENELGDFVLHMDGLANDFLPDAGRWQWRYWGKGSFTPMNATWDVAGKGEWHDSTITLTDLSTGFDQLQYGTMTVEKPRLILDKPIVWVRDAQHPSFSGALSLDAGQTLFTGGSVLPPSTLKFSVDGRDPTYFLFKGDLHAGEIGPVRVNGRWDGIRLRGNAWWPKQSLTVFQPLVPPDWKMNLRDGELYAQVAFSAAPEQGFRAGGHGVLKGGSAWMPDNQVNGVDFVLPFRFADGAWHLGTRGPVTLRIAEVINLVTAKNITADLQGRYPWTEEEPLLLTDVSVDVLGGNVLMKQLRMPQHDPALLRLNNLSSSELVSAVNPKQFAMSGAFSGALPLWLNNEKWIVKDGWLANSGPMTLRLDKDTADAVVKDNMTAGSAINWLRYMEISRSSTKINLDNLGLLTMQANITGTSRVDGKSGTVNLNYHHEENIFTLWRSLRFGDNLQAWLEQNARLPGNDCPQGKECEEKQ", - "protein_translation_length": 879, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1377" - ], - [ - "gene_synonym", - "NP_415900.1" - ], - [ - "gene_synonym", - "ynbE" - ], - [ - "gene_synonym", - "EcoGene:EG14298" - ], - [ - "gene_synonym", - "GeneID:945946" - ], - [ - "gene_synonym", - "GI:16129343" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64448" - ], - [ - "gene_synonym", - "ECK1379" - ], - [ - "gene_synonym", - "b1382" - ], - [ - "gene_synonym", - "ASAP:ABE-0004625" - ] - ], - "dna_sequence": "ATGAAAATTTTACTGGCTGCGTTGACGTCATCTTTTATGCTGGTTGGCTGTACGCCTCGCATTGAAGTCGCTGCACCTAAGGAACCGATCACTATCAATATGAACGTTAAAATTGAGCATGAGATCATCATCAAGGCAGACAAAGATGTCGAAGAGCTGCTTGAAACTCGTAGCGATCTTTTCTGA", - "dna_sequence_length": 186, - "functions": [ - "lipoprotein" - ], - "id": "CDS_1370", - "location": [ - [ - "NC_000913", - 1445687, - "+", - 186 - ] - ], - "md5": "17b6e96073c639f169730d74f5aa6364", - "parent_gene": "", - "protein_md5": "74101bc33104b8f8cf019df3d9166aa5", - "protein_translation": "MKILLAALTSSFMLVGCTPRIEVAAPKEPITINMNVKIEHEIIIKADKDVEELLETRSDLF", - "protein_translation_length": 61, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ydbL" - ], - [ - "gene_synonym", - "EcoGene:EG13733" - ], - [ - "gene_synonym", - "GeneID:945943" - ], - [ - "gene_synonym", - "NP_415901.2" - ], - [ - "gene_synonym", - "ECK1380" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76076" - ], - [ - "gene_synonym", - "GI:90111263" - ], - [ - "gene_synonym", - "b1383" - ], - [ - "gene_synonym", - "JW5216" - ], - [ - "gene_synonym", - "ASAP:ABE-0004627" - ] - ], - "dna_sequence": "ATGAAGAAAACATTACTTCTTTGTGCGTTTCTTGTTGGGCTGGTAAGCAGCAATGTAATGGCATTGACTCTGGATGAAGCCAGAACTCAGGGGCGGGTAGGTGAAACATTTTACGGTTATCTGGTTGCGCTGAAAACGGATGCTGAAACAGAGAAATTAGTAGCCGACATTAATGCCGAACGTAAAGCGAGTTACCAACAACTGGCAAAGCAAAATAATGTGTCGGTAGATGATATCGCGAAACTCGCCGGGCAAAAGCTCGTAGCTCGGGCCAAACCGGGGGAATATGTACAAGGGATAAACGGTAAATGGGTGCGAAAATTTTAA", - "dna_sequence_length": 327, - "functions": [ - "DUF1318 family protein" - ], - "id": "CDS_1371", - "location": [ - [ - "NC_000913", - 1445880, - "+", - 327 - ] - ], - "md5": "d367b0ea126ad1f85902aebf2c8df23c", - "parent_gene": "", - "protein_md5": "e17b93cceda521326f1ff88abfa8ce51", - "protein_translation": "MKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVADINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGINGKWVRKF", - "protein_translation_length": 108, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129345" - ], - [ - "gene_synonym", - "maoR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47129" - ], - [ - "gene_synonym", - "GeneID:945941" - ], - [ - "gene_synonym", - "ydbM" - ], - [ - "gene_synonym", - "ECK1381" - ], - [ - "gene_synonym", - "maoX" - ], - [ - "gene_synonym", - "JW1379" - ], - [ - "gene_synonym", - "NP_415902.1" - ], - [ - "gene_synonym", - "maoB" - ], - [ - "gene_synonym", - "feaR" - ], - [ - "gene_synonym", - "ASAP:ABE-0004630" - ], - [ - "gene_synonym", - "EcoGene:EG13422" - ], - [ - "gene_synonym", - "b1384" - ] - ], - "dna_sequence": "ATGAACCCCGCAGTGGATAATGAGTTTCAGCAATGGCTTTCCCAAATCAATCAGGTATGCGGAAATTTTACCGGACGCCTGCTGACTGAGCGTTACACGGGTGTACTGGACACGCATTTTGCCAAAGGACTAAAGCTGAGTACCGTGACAACCAGCGGGGTGAATTTATCCCGCACCTGGCAGGAAGTAAAAGGCAGCGACGATGCCTGGTTTTACACCGTTTTTCAGCTTAGTGGTCAGGCAATAATGGAGCAGGATGAGCGTCAGGTGCAGATTGGCGCTGGCGATATTACGTTACTCGATGCCTCACGCCCCTGTTCGCTTTACTGGCAGGAGTCTTCTAAACAGATTTCATTACTTTTGCCACGCACTCTGCTGGAACAATATTTTCCCCATCAAAAACCTATCTGCGCAGAAAGACTGGACGCTGACTTACCCATGGTGCAACTCAGTCATCGCCTGTTACAGGAGAGCATGAATAATCCGGCACTTTCTGAAACAGAAAGTGAAGCTGCGCTACAGGCGATGGTGTGTCTGCTGCGCCCGGTACTTCATCAGCGGGAATCTGTTCAACCTCGTCGTGAACGTCAGTTTCAAAAAGTGGTTACGTTGATAGACGATAATATTCGCGAAGAGATATTACGCCCGGAGTGGATAGCCGGAGAGACAGGTATGTCAGTACGTAGTTTGTACCGAATGTTTGCCGATAAAGGTTTGGTAGTCGCGCAATATATTCGTAACCGTCGTCTCGATTTTTGTGCAGATGCGATTCGCCATGCCGCAGATGATGAAAAACTGGCAGGCATCGGCTTTCATTGGGGATTTTCTGACCAGAGTCATTTTTCAACGGTATTTAAGCAACGCTTTGGGATGACGCCAGGCGAGTATCGACGTAAATTCCGCTAA", - "dna_sequence_length": 906, - "functions": [ - "transcriptional activator for tynA and feaB" - ], - "id": "CDS_1372", - "location": [ - [ - "NC_000913", - 1447283, - "-", - 906 - ] - ], - "md5": "f3c5b856b174d22abd03bdf602a8028c", - "parent_gene": "", - "protein_md5": "5e566745cbae80e80f19e4370d118157", - "protein_translation": "MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVTTSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLLDASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQLSHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQKVVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRLDFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKFR", - "protein_translation_length": 301, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "padA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P80668" - ], - [ - "gene_synonym", - "feaB" - ], - [ - "gene_synonym", - "JW1380" - ], - [ - "gene_synonym", - "EcoGene:EG13179" - ], - [ - "gene_synonym", - "ydbG" - ], - [ - "gene_synonym", - "GeneID:945933" - ], - [ - "gene_synonym", - "ECK1382" - ], - [ - "gene_synonym", - "GI:90111264" - ], - [ - "gene_synonym", - "NP_415903.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0004637" - ], - [ - "gene_synonym", - "b1385" - ] - ], - "dna_sequence": "ATGACAGAGCCGCATGTAGCAGTATTAAGCCAGGTCCAACAGTTTCTCGATCGTCAACACGGTCTTTATATTGATGGTCGTCCTGGCCCCGCACAAAGTGAAAAACGGTTGGCGATCTTTGATCCGGCCACCGGGCAAGAAATTGCGTCTACTGCTGATGCCAACGAAGCGGATGTAGATAACGCAGTCATGTCTGCCTGGCGGGCCTTTGTCTCGCGTCGCTGGGCCGGGCGATTACCCGCAGAGCGTGAACGTATTCTGCTACGTTTTGCTGATCTGGTGGAGCAGCACAGTGAGGAGCTGGCGCAACTGGAAACCCTGGAGCAAGGCAAGTCAATTGCCATTTCCCGTGCTTTTGAAGTGGGCTGTACGCTGAACTGGATGCGTTATACCGCCGGGTTAACGACCAAAATCGCGGGTAAAACGCTGGACTTGTCGATTCCCTTACCCCAGGGGGCGCGTTATCAGGCCTGGACGCGTAAAGAGCCGGTTGGCGTAGTGGCGGGAATTGTGCCATGGAACTTTCCGTTGATGATTGGTATGTGGAAGGTGATGCCAGCACTGGCAGCAGGCTGTTCAATCGTGATTAAGCCTTCGGAAACCACGCCACTGACGATGTTGCGCGTGGCGGAACTGGCCAGCGAGGCTGGTATCCCTGATGGCGTTTTTAATGTCGTCACCGGGTCAGGTGCTGTATGCGGCGCGGCCCTGACGTCACATCCTCATGTTGCGAAAATCAGTTTTACCGGTTCAACCGCGACGGGAAAAGGTATTGCCAGAACTGCTGCTGATCACTTAACGCGTGTAACGCTGGAACTGGGCGGTAAAAACCCGGCAATTGTATTAAAAGATGCTGATCCGCAATGGGTTATTGAAGGCTTGATGACCGGAAGCTTCCTGAATCAAGGGCAAGTATGCGCCGCCAGTTCGCGAATTTATATTGAAGCGCCGTTGTTTGACACGCTGGTTAGTGGATTTGAGCAGGCGGTAAAATCGTTGCAAGTGGGACCGGGGATGTCACCTGTTGCACAGATTAACCCTTTGGTTTCTCGTGCGCACTGCGACAAAGTGTGTTCATTCCTCGACGATGCGCAGGCACAGCAAGCAGAGCTGATTCGCGGGTCGAATGGACCAGCCGGAGAGGGGTATTATGTTGCGCCAACGCTGGTGGTAAATCCCGATGCTAAATTGCGCTTAACTCGTGAAGAGGTGTTTGGTCCGGTGGTAAACCTGGTGCGAGTAGCGGATGGAGAAGAGGCGTTACAACTGGCAAACGACACGGAATATGGCTTAACTGCCAGTGTCTGGACGCAAAATCTCTCCCAGGCTCTGGAATATAGCGATCGCTTACAGGCAGGGACGGTGTGGGTAAACAGCCATACCTTAATTGACGCTAACTTACCGTTTGGTGGGATGAAGCAGTCAGGAACGGGCCGTGATTTTGGCCCCGACTGGCTGGACGGTTGGTGTGAAACTAAGTCGGTGTGTGTACGGTATTAA", - "dna_sequence_length": 1500, - "functions": [ - "phenylacetaldehyde dehydrogenase" - ], - "id": "CDS_1373", - "location": [ - [ - "NC_000913", - 1447519, - "+", - 1500 - ] - ], - "md5": "94747b91e514f380117efe579a356df7", - "parent_gene": "", - "protein_md5": "a898d666b1d3b33a18542d1995da4920", - "protein_translation": "MTEPHVAVLSQVQQFLDRQHGLYIDGRPGPAQSEKRLAIFDPATGQEIASTADANEADVDNAVMSAWRAFVSRRWAGRLPAERERILLRFADLVEQHSEELAQLETLEQGKSIAISRAFEVGCTLNWMRYTAGLTTKIAGKTLDLSIPLPQGARYQAWTRKEPVGVVAGIVPWNFPLMIGMWKVMPALAAGCSIVIKPSETTPLTMLRVAELASEAGIPDGVFNVVTGSGAVCGAALTSHPHVAKISFTGSTATGKGIARTAADHLTRVTLELGGKNPAIVLKDADPQWVIEGLMTGSFLNQGQVCAASSRIYIEAPLFDTLVSGFEQAVKSLQVGPGMSPVAQINPLVSRAHCDKVCSFLDDAQAQQAELIRGSNGPAGEGYYVAPTLVVNPDAKLRLTREEVFGPVVNLVRVADGEEALQLANDTEYGLTASVWTQNLSQALEYSDRLQAGTVWVNSHTLIDANLPFGGMKQSGTGRDFGPDWLDGWCETKSVCVRY", - "protein_translation_length": 499, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tynA" - ], - [ - "gene_synonym", - "EcoGene:EG13140" - ], - [ - "gene_synonym", - "JW1381" - ], - [ - "gene_synonym", - "NP_415904.3" - ], - [ - "gene_synonym", - "ASAP:ABE-0004639" - ], - [ - "gene_synonym", - "GI:162135920" - ], - [ - "gene_synonym", - "maoA" - ], - [ - "gene_synonym", - "ECK1383" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46883" - ], - [ - "gene_synonym", - "GeneID:945939" - ], - [ - "gene_synonym", - "b1386" - ] - ], - "dna_sequence": "ATGGGAAGCCCCTCTCTGTATTCTGCCCGTAAAACAACCCTGGCGTTGGCAGTCGCCTTAAGTTTCGCCTGGCAAGCGCCGGTATTTGCCCACGGTGGTGAAGCGCATATGGTGCCAATGGATAAAACGCTTAAAGAATTTGGTGCCGATGTGCAGTGGGACGACTACGCCCAGCTCTTTACCCTGATTAAAGATGGCGCGTACGTGAAAGTGAAGCCTGGTGCGCAAACAGCAATTGTTAATGGTCAGCCTCTGGCACTGCAAGTACCGGTAGTGATGAAAGACAATAAAGCCTGGGTTTCTGACACCTTTATTAACGATGTTTTCCAGTCCGGGCTGGATCAAACCTTTCAGGTAGAAAAGCGCCCTCACCCACTTAATGCGCTAACTGCGGACGAAATTAAACAGGCCGTTGAAATTGTTAAAGCTTCCGCGGACTTCAAACCCAATACCCGTTTTACTGAGATCTCCCTGCTACCGCCAGATAAAGAAGCTGTCTGGGCGTTTGCGCTGGAAAACAAACCGGTTGACCAGCCGCGCAAAGCCGACGTCATTATGCTCGACGGCAAACATATCATCGAAGCGGTGGTGGATCTGCAAAACAACAAACTGCTCTCCTGGCAACCCATTAAAGACGCCCACGGTATGGTGTTGCTGGATGATTTCGCCAGTGTGCAGAACATTATTAACAACAGTGAAGAATTTGCCGCTGCCGTGAAGAAACGCGGTATTACTGATGCGAAAAAAGTGATTACCACGCCGCTGACCGTAGGTTATTTCGATGGTAAAGATGGCCTGAAACAAGATGCCCGGTTGCTCAAAGTCATCAGCTATCTTGATGTCGGTGATGGCAACTACTGGGCACATCCCATCGAAAACCTGGTGGCGGTCGTTGATTTAGAACAGAAAAAAATCGTTAAGATTGAAGAAGGTCCGGTAGTTCCGGTGCCAATGACCGCACGCCCATTTGATGGCCGTGACCGCGTTGCTCCGGCAGTTAAGCCTATGCAAATCATTGAGCCTGAAGGTAAAAATTACACCATTACTGGCGATATGATTCACTGGCGGAACTGGGATTTTCACCTCAGCATGAACTCTCGCGTCGGGCCGATGATCTCCACCGTGACTTATAACGACAATGGCACCAAACGCAAAGTCATGTACGAAGGTTCTCTCGGCGGCATGATTGTGCCTTACGGTGATCCTGATATTGGCTGGTACTTTAAAGCGTATCTGGACTCTGGTGACTACGGTATGGGCACGCTAACCTCACCAATTGCTCGTGGTAAAGATGCCCCGTCTAACGCAGTGCTCCTTAATGAAACCATCGCCGACTACACTGGCGTGCCGATGGAGATCCCTCGCGCTATCGCGGTATTTGAACGTTATGCCGGGCCGGAGTATAAGCATCAGGAAATGGGCCAGCCCAACGTCAGTACCGAACGCCGGGAGTTAGTGGTGCGCTGGATCAGTACAGTGGGTAACTATGACTACATTTTTGACTGGATCTTCCATGAAAACGGCACTATTGGCATCGATGCCGGTGCTACGGGCATCGAAGCGGTGAAAGGTGTTAAAGCGAAAACCATGCACGATGAGACGGCGAAAGATGACACGCGCTACGGCACGCTTATCGATCACAATATCGTGGGTACTACACACCAACATATTTATAATTTCCGCCTCGATCTGGATGTAGATGGCGAGAATAACAGCCTGGTGGCGATGGACCCAGTGGTAAAACCGAATACTGCCGGTGGCCCACGCACCAGTACCATGCAAGTTAATCAGTACAACATCGGCAATGAACAGGATGCCGCACAGAAATTTGATCCGGGCACGATTCGTCTGTTGAGTAACCCGAACAAAGAGAACCGCATGGGCAATCCGGTTTCCTATCAAATTATTCCTTATGCAGGTGGTACTCACCCGGTAGCAAAAGGTGCCCAGTTCGCGCCGGACGAGTGGATCTATCATCGTTTAAGCTTTATGGACAAGCAGCTCTGGGTAACGCGTTATCATCCTGGCGAGCGTTTCCCGGAAGGCAAATATCCGAACCGTTCTACTCATGACACCGGTCTTGGACAATACAGTAAGGATAACGAGTCGCTGGACAACACCGACGCCGTTGTCTGGATGACCACCGGCACCACACATGTGGCCCGCGCCGAAGAGTGGCCGATTATGCCGACCGAATGGGTACATACTCTGCTGAAACCATGGAACTTCTTTGACGAAACGCCAACGCTAGGGGCGCTGAAGAAAGATAAGTGA", 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"MGSPSLYSARKTTLALAVALSFAWQAPVFAHGGEAHMVPMDKTLKEFGADVQWDDYAQLFTLIKDGAYVKVKPGAQTAIVNGQPLALQVPVVMKDNKAWVSDTFINDVFQSGLDQTFQVEKRPHPLNALTADEIKQAVEIVKASADFKPNTRFTEISLLPPDKEAVWAFALENKPVDQPRKADVIMLDGKHIIEAVVDLQNNKLLSWQPIKDAHGMVLLDDFASVQNIINNSEEFAAAVKKRGITDAKKVITTPLTVGYFDGKDGLKQDARLLKVISYLDVGDGNYWAHPIENLVAVVDLEQKKIVKIEEGPVVPVPMTARPFDGRDRVAPAVKPMQIIEPEGKNYTITGDMIHWRNWDFHLSMNSRVGPMISTVTYNDNGTKRKVMYEGSLGGMIVPYGDPDIGWYFKAYLDSGDYGMGTLTSPIARGKDAPSNAVLLNETIADYTGVPMEIPRAIAVFERYAGPEYKHQEMGQPNVSTERRELVVRWISTVGNYDYIFDWIFHENGTIGIDAGATGIEAVKGVKAKTMHDETAKDDTRYGTLIDHNIVGTTHQHIYNFRLDLDVDGENNSLVAMDPVVKPNTAGGPRTSTMQVNQYNIGNEQDAAQKFDPGTIRLLSNPNKENRMGNPVSYQIIPYAGGTHPVAKGAQFAPDEWIYHRLSFMDKQLWVTRYHPGERFPEGKYPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHVARAEEWPIMPTEWVHTLLKPWNFFDETPTLGALKKDK", - "protein_translation_length": 757, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tynP?" - ], - [ - "gene_synonym", - "ydbN" - ], - [ - "gene_synonym", - "paaZ" - ], - [ - "gene_synonym", - "JW1382" - ], - [ - "gene_synonym", - "NP_415905.1" - ], - [ - "gene_synonym", - "GeneID:945954" - ], - [ - "gene_synonym", - "ASAP:ABE-0004644" - ], - [ - "gene_synonym", - "maoC" - ], - [ - "gene_synonym", - "ECK1384" - ], - [ - "gene_synonym", - "EcoGene:EG13735" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77455" - ], - [ - "gene_synonym", - "b1387" - ], - [ - "gene_synonym", - "GI:16129348" - ] - ], - "dna_sequence": "ATGCAGCAGTTAGCCAGTTTCTTATCCGGTACCTGGCAGTCTGGCCGGGGCCGTAGCCGTTTGATTCACCACGCTATTAGCGGCGAGGCGTTATGGGAAGTGACCAGTGAAGGTCTTGATATGGCGGCTGCCCGCCAGTTTGCCATTGAAAAAGGTGCCCCCGCCCTTCGCGCTATGACCTTTATCGAACGTGCGGCGATGCTTAAAGCGGTCGCTAAACATCTGCTGAGTGAAAAAGAGCGTTTCTATGCTCTTTCTGCGCAAACAGGCGCAACGCGGGCAGACAGTTGGGTTGATATTGAAGGTGGCATTGGGACGTTATTTACTTACGCCAGCCTCGGTAGCCGGGAGCTGCCTGACGATACGCTGTGGCCGGAAGATGAATTGATCCCCTTATCGAAAGAAGGTGGATTTGCCGCGCGCCATTTACTGACCTCAAAGTCAGGCGTGGCAGTGCATATTAACGCCTTTAACTTCCCCTGCTGGGGAATGCTGGAAAAGCTGGCACCAACGTGGCTGGGCGGAATGCCAGCCATCATCAAACCAGCTACCGCGACGGCCCAACTGACTCAGGCGATGGTGAAATCAATTGTCGATAGTGGTCTTGTTCCCGAAGGCGCAATTAGTCTGATCTGCGGTAGTGCTGGCGACTTGTTGGATCATCTGGACAGCCAGGATGTGGTGACTTTCACGGGGTCAGCGGCGACCGGACAGATGCTGCGAGTTCAGCCAAATATCGTCGCCAAATCTATCCCCTTCACTATGGAAGCTGATTCCCTGAACTGCTGCGTACTGGGCGAAGATGTCACCCCGGATCAACCGGAGTTTGCGCTGTTTATTCGTGAAGTTGTGCGTGAGATGACCACAAAAGCCGGGCAAAAATGTACGGCAATCCGGCGGATTATTGTGCCGCAGGCATTGGTTAATGCTGTCAGTGATGCTCTGGTTGCGCGATTACAGAAAGTCGTGGTCGGTGATCCTGCTCAGGAAGGCGTGAAAATGGGCGCACTGGTAAATGCTGAGCAGCGTGCCGATGTGCAGGAAAAAGTGAACATATTGCTGGCTGCAGGATGCGAGATTCGCCTCGGTGGTCAGGCGGATTTATCTGCTGCGGGTGCCTTCTTCCCGCCAACCTTATTGTACTGTCCGCAGCCGGATGAAACACCGGCGGTACATGCAACAGAAGCCTTTGGCCCTGTCGCAACGCTGATGCCAGCACAAAACCAGCGACATGCTCTGCAACTGGCTTGTGCAGGCGGCGGTAGCCTTGCGGGAACGCTGGTGACGGCTGATCCGCAAATTGCGCGTCAGTTTATTGCCGACGCGGCACGTACGCATGGGCGAATTCAGATCCTCAATGAAGAGTCGGCAAAAGAATCCACCGGGCATGGCTCCCCACTGCCACAACTGGTACATGGTGGGCCTGGTCGCGCAGGAGGCGGTGAAGAATTAGGCGGTTTACGAGCGGTGAAACATTACATGCAGCGAACCGCTGTTCAGGGTAGTCCGACGATGCTTGCCGCTATCAGTAAACAGTGGGTGCGCGGTGCGAAAGTCGAAGAAGATCGTATTCATCCGTTCCGCAAATATTTTGAGGAGCTACAACCAGGCGACAGCCTGTTGACTCCCCGCCGCACAATGACAGAGGCCGATATTGTTAACTTTGCTTGCCTCAGCGGCGATCATTTCTATGCACATATGGATAAGATTGCTGCTGCCGAATCTATTTTCGGTGAGCGGGTGGTGCATGGGTATTTTGTGCTTTCTGCGGCTGCGGGTCTGTTTGTCGATGCCGGTGTCGGTCCGGTCATTGCTAACTACGGGCTGGAAAGCTTGCGTTTTATCGAACCCGTAAAGCCAGGCGATACCATCCAGGTGCGTCTCACCTGTAAGCGCAAGACGCTGAAAAAACAGCGTAGCGCAGAAGAAAAACCAACAGGTGTGGTGGAATGGGCTGTAGAGGTATTCAATCAGCATCAAACCCCGGTGGCGCTGTATTCAATTCTGACGCTGGTGGCCAGGCAGCACGGTGATTTTGTCGATTAA", 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"MQQLASFLSGTWQSGRGRSRLIHHAISGEALWEVTSEGLDMAAARQFAIEKGAPALRAMTFIERAAMLKAVAKHLLSEKERFYALSAQTGATRADSWVDIEGGIGTLFTYASLGSRELPDDTLWPEDELIPLSKEGGFAARHLLTSKSGVAVHINAFNFPCWGMLEKLAPTWLGGMPAIIKPATATAQLTQAMVKSIVDSGLVPEGAISLICGSAGDLLDHLDSQDVVTFTGSAATGQMLRVQPNIVAKSIPFTMEADSLNCCVLGEDVTPDQPEFALFIREVVREMTTKAGQKCTAIRRIIVPQALVNAVSDALVARLQKVVVGDPAQEGVKMGALVNAEQRADVQEKVNILLAAGCEIRLGGQADLSAAGAFFPPTLLYCPQPDETPAVHATEAFGPVATLMPAQNQRHALQLACAGGGSLAGTLVTADPQIARQFIADAARTHGRIQILNEESAKESTGHGSPLPQLVHGGPGRAGGGEELGGLRAVKHYMQRTAVQGSPTMLAAISKQWVRGAKVEEDRIHPFRKYFEELQPGDSLLTPRRTMTEADIVNFACLSGDHFYAHMDKIAAAESIFGERVVHGYFVLSAAAGLFVDAGVGPVIANYGLESLRFIEPVKPGDTIQVRLTCKRKTLKKQRSAEEKPTGVVEWAVEVFNQHQTPVALYSILTLVARQHGDFVD", - "protein_translation_length": 681, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945833" - ], - [ - "gene_synonym", - "b1388" - ], - [ - "gene_synonym", - "ydbO" - ], - [ - "gene_synonym", - "ASAP:ABE-0004649" - ], - [ - "gene_synonym", - "JW1383" - ], - [ - "gene_synonym", - "GI:16129349" - ], - [ - "gene_synonym", - "EcoGene:EG13736" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76077" - ], - [ - "gene_synonym", - "paaA" - ], - [ - "gene_synonym", - "ECK1385" - ], - [ - "gene_synonym", - "NP_415906.1" - ] - ], - "dna_sequence": "GTGACCCAAGAAGAACGCTTTGAGCAACGGATAGCCCAGGAAACGGCTATCGAGCCACAGGACTGGATGCCCGATGCTTACCGAAAGACATTGATCCGCCAGATTGGGCAGCATGCGCACTCCGAGATTGTTGGTATGTTGCCTGAAGGTAACTGGATCACTCGCGCACCAACCTTGCGGCGTAAAGCCATTCTGTTGGCCAAAGTGCAGGATGAAGCCGGTCATGGTCTGTATCTCTATAGCGCCGCCGAAACACTGGGCTGCGCCAGAGAAGACATCTACCAAAAAATGCTCGACGGACGGATGAAATATTCCTCCATCTTTAATTATCCGACATTGAGTTGGGCTGATATCGGTGTTATCGGCTGGCTGGTGGATGGCGCAGCGATCGTCAATCAGGTGGCGTTATGCCGCACTTCTTATGGCCCGTATGCCAGAGCAATGGTGAAAATCTGCAAAGAAGAGAGTTTTCACCAGCGTCAGGGGTTTGAAGCCTGCATGGCACTGGCGCAGGGCAGCGAAGCTCAAAAGCAGATGTTGCAAGACGCCATTAACCGTTTCTGGTGGCCAGCCTTAATGATGTTCGGGCCAAACGATGATAACTCGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGTTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAGGAGAGGCTCGACGCCAAACGTAAAGCCTGGGAAGAAGGTACCTGGGTACGGGAAGCAGCGCTGGCCCATGCACAAAAACAACATGCCCGTAAGGTCGCATAA", - "dna_sequence_length": 930, - "functions": [ - "ring 1,2-phenylacetyl-CoA epoxidase subunit" - ], - "id": "CDS_1376", - "location": [ - [ - "NC_000913", - 1453927, - "+", - 930 - ] - ], - "md5": "75ba47687840359c3572da28671e5da6", - "parent_gene": "", - "protein_md5": "a98a5e41f3db9b4d8241ad4b00886036", - "protein_translation": "MTQEERFEQRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDIYQKMLDGRMKYSSIFNYPTLSWADIGVIGWLVDGAAIVNQVALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQGSEAQKQMLQDAINRFWWPALMMFGPNDDNSPNSARSLTWKIKRFTNDELRQRFVDNTVPQVEMLGMTVPDPDLHFDTESGHYRFGEIDWQEFNEVINGRGICNQERLDAKRKAWEEGTWVREAALAHAQKQHARKVA", - "protein_translation_length": 309, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947595" - ], - [ - "gene_synonym", - "ynbF" - ], - [ - "gene_synonym", - "EcoGene:EG14299" - ], - [ - "gene_synonym", - "GI:16129350" - ], - [ - "gene_synonym", - "ASAP:ABE-0004651" - ], - [ - "gene_synonym", - "JW1384" - ], - [ - "gene_synonym", - "paaB" - ], - [ - "gene_synonym", - "b1389" - ], - [ - "gene_synonym", - "ECK1386" - ], - [ - "gene_synonym", - "NP_415907.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76078" - ] - ], - "dna_sequence": "ATGAGTAATGTTTACTGGCCGTTATACGAAGTTTTCGTGCGTGGCAAACAGGGCTTATCACACCGCCATGTTGGCAGTTTACATGCTGCCGATGAGCGGATGGCACTGGAAAATGCCCGTGATGCTTACACCCGTCGTAGCGAAGGATGTTCAATTTGGGTGGTGAAGGCGAGTGAAATTGTTGCCTCGCAACCGGAAGAACGCGGTGAATTTTTTGATCCGGCTGAAAGCAAGGTCTATCGCCATCCAACGTTTTACACCATCCCTGATGGCATTGAGCACATGTGA", - "dna_sequence_length": 288, - "functions": [ - "putative ring 1,2-phenylacetyl-CoA epoxidase subunit" - ], - "id": "CDS_1377", - "location": [ - [ - "NC_000913", - 1454868, - "+", - 288 - ] - ], - "md5": "f751cd33d0606976eb0b27e371dd3d7d", - "parent_gene": "", - "protein_md5": "c46fa3a8e8b8da6113ee7ab3c800f68d", - "protein_translation": "MSNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYTRRSEGCSIWVVKASEIVASQPEERGEFFDPAESKVYRHPTFYTIPDGIEHM", - "protein_translation_length": 95, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1390" - ], - [ - "gene_synonym", - "NP_415908.1" - ], - [ - "gene_synonym", - "GI:16129351" - ], - [ - "gene_synonym", - "EcoGene:EG13737" - ], - [ - "gene_synonym", - "JW1385" - ], - [ - "gene_synonym", - "GeneID:945956" - ], - [ - "gene_synonym", - "paaC" - ], - [ - "gene_synonym", - "ASAP:ABE-0004653" - ], - [ - "gene_synonym", - "ECK1387" - ], - [ - "gene_synonym", - "ydbP" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76079" - ] - ], - "dna_sequence": "ATGAATCAGTTAACGGCTTACACCTTGCGCCTGGGCGATAACTGCCTGGTGCTCTCCCAGCGGTTGGGTGAATGGTGCGGTCACGCACCGGAACTGGAAATCGATCTCGCACTGGCAAACATTGGCCTCGATTTATTAGGTCAGGCACGCAACTTCTTATCGTATGCCGCTGAATTAGCGGGAGAAGGCGATGAAGATACCCTGGCCTTCACCCGAGACGAGCGCCAGTTCAGCAACTTATTGTTGGTTGAACAACCAAACGGCAATTTTGCCGACACCATTGCACGCCAGTATTTCATCGATGCATGGCATGTGGCGCTCTTTACCCGTCTGATGGAAAGCCGTGATCCGCAACTGGCGGCGATTTCTGCCAAAGCAATTAAAGAAGCGCGCTATCACCTGCGTTTTAGTCGTGGCTGGCTGGAGCGACTGGGCAATGGTACTGACGTATCAGGGCAAAAGATGCAGCAGGCCATCAACAAGTTGTGGCGTTTTACCGCCGAACTGTTCGATGCCGACGAGATTGATATTGCACTGAGTGAAGAGGGTATTGCGGTTGATCCACGCACTTTACGCGCAGCGTGGGAAGCCGAAGTTTTTGCCGGGATCAACGAAGCCACATTGAACGTACCGCAAGAGCAGGCGTATCGCACTGGCGGTAAAAAAGGACTGCATACCGAACACCTTGGACCCATGCTGGCAGAAATGCAGTATCTCCAGCGTGTCTTGCCCGGTCAGCAATGGTAA", - "dna_sequence_length": 747, - "functions": [ - "ring 1,2-phenylacetyl-CoA epoxidase subunit" - ], - "id": "CDS_1378", - "location": [ - [ - "NC_000913", - 1455164, - "+", - 747 - ] - ], - "md5": "1e7f96f141b71f3a1d5a79eec1969aa4", - "parent_gene": "", - "protein_md5": "ff03f8165dfba10e5c8adf9b932ddb24", - "protein_translation": "MNQLTAYTLRLGDNCLVLSQRLGEWCGHAPELEIDLALANIGLDLLGQARNFLSYAAELAGEGDEDTLAFTRDERQFSNLLLVEQPNGNFADTIARQYFIDAWHVALFTRLMESRDPQLAAISAKAIKEARYHLRFSRGWLERLGNGTDVSGQKMQQAINKLWRFTAELFDADEIDIALSEEGIAVDPRTLRAAWEAEVFAGINEATLNVPQEQAYRTGGKKGLHTEHLGPMLAEMQYLQRVLPGQQW", - "protein_translation_length": 248, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945959" - ], - [ - "gene_synonym", - "EcoGene:EG13738" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76080" - ], - [ - "gene_synonym", - "b1391" - ], - [ - "gene_synonym", - "ASAP:ABE-0004655" - ], - [ - "gene_synonym", - "ydbQ" - ], - [ - "gene_synonym", - "NP_415909.4" - ], - [ - "gene_synonym", - "paaD" - ], - [ - "gene_synonym", - "GI:226524712" - ], - [ - "gene_synonym", - "ECK1388" - ], - [ - "gene_synonym", - "JW5217" - ] - ], - "dna_sequence": "ATGCAACGTCTGGCCACCATTGCACCGCCACAGGTTCATGAGATATGGGCGCTACTCAGCCAGATCCCGGACCCGGAGATCCCGGTGCTGACCATTACTGATTTAGGCATGGTGCGTAATGTGACACAGATGGGAGAAGGATGGGTGATCGGCTTTACGCCGACATATTCCGGTTGTCCGGCAACGGAACATTTGATTGGCGCGATACGTGAGGCAATGACAACCAACGGGTTTACCCCCGTTCAGGTTGTGCTGCAACTCGACCCGGCATGGACCACCGACTGGATGACCCCCGATGCCCGTGAGCGTCTGCGAGAGTATGGCATTAGCCCGCCCGCCGGACACAGTTGCCATGCCCATTTGCCGCCAGAAGTACGTTGCCCGCGCTGCGCCAGCGTCCATACCACACTTATCAGTGAATTTGGTTCCACGGCCTGCAAAGCATTGTACCGCTGCGATAGTTGCCGCGAACCTTTCGATTATTTCAAATGTATTTGA", - "dna_sequence_length": 498, - "functions": [ - "ring 1,2-phenylacetyl-CoA epoxidase subunit" - ], - "id": "CDS_1379", - "location": [ - [ - "NC_000913", - 1455925, - "+", - 498 - ] - ], - "md5": "a4dffa772c518452a8efcdd82cdfce2a", - "parent_gene": "", - "protein_md5": "dd2f272e4c07d2e5c190093f163c8329", - "protein_translation": "MQRLATIAPPQVHEIWALLSQIPDPEIPVLTITDLGMVRNVTQMGEGWVIGFTPTYSGCPATEHLIGAIREAMTTNGFTPVQVVLQLDPAWTTDWMTPDARERLREYGISPPAGHSCHAHLPPEVRCPRCASVHTTLISEFGSTACKALYRCDSCREPFDYFKCI", - "protein_translation_length": 165, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13739" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76081" - ], - [ - "gene_synonym", - "b1392" - ], - [ - "gene_synonym", - "GI:16129353" - ], - [ - "gene_synonym", - "ASAP:ABE-0004657" - ], - [ - "gene_synonym", - "paaE" - ], - [ - "gene_synonym", - "JW1387" - ], - [ - "gene_synonym", - "GeneID:945962" - ], - [ - "gene_synonym", - "NP_415910.1" - ], - [ - "gene_synonym", - "ECK1389" - ], - [ - "gene_synonym", - "ydbR" - ] - ], - "dna_sequence": "ATGACAACGTTTCATTCCTTAACAGTGGCAAAAGTCGAGTCGGAAACCCGTGATGCGGTGACCATTACCTTTGCGGTGCCCCAGCCTTTGCAGGAGGCGTATCGCTTTCGCCCCGGTCAACATTTGACCTTAAAAGCCAGCTTTGATGGTGAAGAATTACGCCGTTGTTACTCCATTTGCCGCAGCTATCTGCCTGGCGAAATTAGTGTGGCGGTGAAAGCCATTGAAGGCGGACGTTTCTCCCGCTATGCCCGCGAACACATCCGCCAGGGTATGACGCTGGAGGTCATGGTGCCGCAGGGGCATTTCGGCTATCAGCCGCAGGCCGAACGCCAGGGGCGCTATCTGGCAATTGCAGCAGGATCAGGTATTACGCCAATGCTGGCGATTATCGCCACCACTTTACAAACCGAGCCTGAAAGTCAGTTCACCCTGATCTACGGTAACCGTACCAGCCAGAGCATGATGTTTCGCCAGGCACTGGCAGACCTGAAAGACAAATATCCTCAGCGTTTACAGTTGTTGTGCATTTTCAGTCAGGAAACCCTCGACAGCGATCTGCTTCACGGGCGTATTGACGGTGAAAAATTACAGTCACTTGGGGCCTCGCTCATTAATTTTCGTCTTTATGATGAGGCATTTATTTGTGGTCCGGCGGCGATGATGGATGACGCGGAAACCGCCTTAAAAGCACTGGGAATGCCAGATAAAACCATTCATCTGGAGCGGTTTAATACGCCTGGCACGCGCGTCAAACGTAGCGTTAACGTGCAAAGTGACGGACAAAAAGTGACTGTACGTCAGGATGGGCGGGATCGGGAAATCGTGCTTAATGCCGACGATGAAAGCATTCTCGATGCGGCATTGCGCCAGGGGGCGGATCTGCCCTATGCCTGCAAAGGCGGCGTCTGTGCGACCTGCAAATGCAAAGTGCTGCGTGGCAAAGTGGCGATGGAAACCAATTACAGTCTGGAACCGGATGAACTGGCCGCAGGTTATGTGTTGAGTTGCCAGGCACTGCCGCTGACCAGCGATGTGGTGGTTGACTTTGACGCGAAGGGGATGGCATGA", - "dna_sequence_length": 1071, - "functions": [ - "ring 1,2-phenylacetyl-CoA epoxidase, NAD(P)H oxidoreductase component" - ], - "id": "CDS_1380", - "location": [ - [ - "NC_000913", - 1456430, - "+", - 1071 - ] - ], - "md5": "39120c30a022a7bd02c7e67120b030f1", - "parent_gene": "", - "protein_md5": "85cb8ff0051ccca0f6416e5c7ea5dc28", - "protein_translation": "MTTFHSLTVAKVESETRDAVTITFAVPQPLQEAYRFRPGQHLTLKASFDGEELRRCYSICRSYLPGEISVAVKAIEGGRFSRYAREHIRQGMTLEVMVPQGHFGYQPQAERQGRYLAIAAGSGITPMLAIIATTLQTEPESQFTLIYGNRTSQSMMFRQALADLKDKYPQRLQLLCIFSQETLDSDLLHGRIDGEKLQSLGASLINFRLYDEAFICGPAAMMDDAETALKALGMPDKTIHLERFNTPGTRVKRSVNVQSDGQKVTVRQDGRDREIVLNADDESILDAALRQGADLPYACKGGVCATCKCKVLRGKVAMETNYSLEPDELAAGYVLSCQALPLTSDVVVDFDAKGMA", - "protein_translation_length": 356, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1388" - ], - [ - "gene_synonym", - "ASAP:ABE-0004659" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76082" - ], - [ - "gene_synonym", - "b1393" - ], - [ - "gene_synonym", - "GI:16129354" - ], - [ - "gene_synonym", - "GeneID:946011" - ], - [ - "gene_synonym", - "ECK1390" - ], - [ - "gene_synonym", - "paaF" - ], - [ - "gene_synonym", - "EcoGene:EG13740" - ], - [ - "gene_synonym", - "ydbR" - ], - [ - "gene_synonym", - "NP_415911.1" - ] - ], - "dna_sequence": "ATGAGCGAACTGATCGTCAGCCGTCAGCAACGAGTATTGTTGCTGACCCTTAACCGTCCCGCCGCACGTAATGCGCTAAATAATGCCCTGCTGATGCAACTGGTAAATGAACTGGAAGCTGCGGCTACCGATACCAGCATTTCGGTCTGTGTGATTACCGGTAATGCACGCTTTTTTGCCGCTGGGGCCGATCTCAACGAAATGGCAGAAAAAGATCTCGCGGCCACCTTAAACGATACACGTCCGCAGCTATGGGCGCGATTGCAGGCCTTTAATAAACCACTTATCGCAGCCGTCAATGGTTACGCGCTTGGGGCGGGTTGCGAACTGGCATTGTTGTGCGATGTGGTGGTTGCCGGAGAGAACGCGCGTTTTGGGTTGCCGGAAATCACTCTCGGCATCATGCCTGGCGCAGGCGGAACGCAACGTTTAATCCGTAGTGTCGGTAAATCGTTAGCCAGCAAAATGGTGCTGAGCGGAGAAAGTATCACCGCTCAGCAAGCACAGCAGGCCGGGCTGGTTAGCGACGTCTTCCCCAGCGATTTAACCCTCGAATACGCCTTACAGCTGGCATCGAAAATGGCACGTCACTCGCCGCTGGCCTTACAAGCGGCAAAGCAAGCGCTGCGCCAGTCGCAGGAAGTGGCTTTGCAAGCCGGACTTGCCCAGGAGCGACAGTTATTCACCTTGCTGGCGGCAACAGAAGATCGTCATGAAGGCATCTCCGCTTTCTTACAAAAACGCACGCCCGACTTTAAAGGACGCTAA", - "dna_sequence_length": 768, - "functions": [ - "2,3-dehydroadipyl-CoA hydratase" - ], - "id": "CDS_1381", - "location": [ - [ - "NC_000913", - 1457497, - "+", - 768 - ] - ], - "md5": "4ddf0b026dfc350716aa0d08a89dbfe8", - "parent_gene": "", - "protein_md5": "068abca323794bdfe8432b8d5ba266c3", - "protein_translation": "MSELIVSRQQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLAATLNDTRPQLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQAAKQALRQSQEVALQAGLAQERQLFTLLAATEDRHEGISAFLQKRTPDFKGR", - "protein_translation_length": 255, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1394" - ], - [ - "gene_synonym", - "JW1389" - ], - [ - "gene_synonym", - "ASAP:ABE-0004661" - ], - [ - "gene_synonym", - "NP_415912.1" - ], - [ - "gene_synonym", - "GI:16129355" - ], - [ - "gene_synonym", - "ECK1391" - ], - [ - "gene_synonym", - "paaG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77467" - ], - [ - "gene_synonym", - "EcoGene:EG13741" - ], - [ - "gene_synonym", - "ydbT" - ], - [ - "gene_synonym", - "GeneID:946263" - ] - ], - "dna_sequence": "ATGATGGAATTCATCCTCAGTCATGTAGAAAAGGGCGTGATGACACTAACGCTCAACCGCCCGGAACGCCTGAACAGTTTTAATGATGAGATGCACGCACAACTGGCAGAGTGCCTGAAACAGGTCGAGCGCGACGACACTATCCGTTGCCTGTTACTTACAGGTGCCGGGCGCGGATTTTGTGCTGGTCAGGATCTTAACGATCGTAACGTTGATCCCACAGGCCCCGCACCGGATTTAGGGATGTCAGTTGAACGTTTCTATAACCCACTGGTACGTCGCCTGGCAAAACTGCCAAAACCGGTGATCTGTGCAGTCAATGGCGTGGCGGCAGGGGCAGGCGCAACACTGGCACTGGGGGGCGACATCGTTATTGCTGCCCGTTCAGCAAAATTCGTCATGGCGTTTAGTAAGTTAGGCTTAATACCCGATTGCGGTGGAACCTGGTTACTGCCACGCGTTGCCGGACGAGCGCGCGCCATGGGGCTGGCACTGCTGGGGAATCAACTGAGTGCTGAACAGGCGCACGAATGGGGGATGATCTGGCAGGTTGTTGATGATGAAACGCTGGCAGATACCGCGCAACAGCTGGCACGGCATCTGGCGACACAACCGACATTTGGTCTTGGACTTATCAAGCAAGCGATAAATAGCGCTGAAACCAATACGCTCGATACGCAACTGGATCTGGAACGTGACTATCAGCGACTTGCCGGACGGAGCGCAGATTATCGTGAAGGTGTCAGTGCGTTCCTGGCTAAACGCTCACCGCAGTTCACGGGGAAATAG", - "dna_sequence_length": 789, - "functions": [ - "1,2-epoxyphenylacetyl-CoA isomerase, oxepin-CoA-forming" - ], - "id": "CDS_1382", - "location": [ - [ - "NC_000913", - 1458264, - "+", - 789 - ] - ], - "md5": "2100a00365754321f780e343686e1e21", - "parent_gene": "", - "protein_md5": "9deb2dc4c08c65338389af1e760b8c04", - "protein_translation": "MMEFILSHVEKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARAMGLALLGNQLSAEQAHEWGMIWQVVDDETLADTAQQLARHLATQPTFGLGLIKQAINSAETNTLDTQLDLERDYQRLAGRSADYREGVSAFLAKRSPQFTGK", - "protein_translation_length": 262, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1395" - ], - [ - "gene_synonym", - "ASAP:ABE-0004663" - ], - [ - "gene_synonym", - "GI:16129356" - ], - [ - "gene_synonym", - "GeneID:945940" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76083" - ], - [ - "gene_synonym", - "JW1390" - ], - [ - "gene_synonym", - "NP_415913.1" - ], - [ - "gene_synonym", - "ECK1392" - ], - [ - "gene_synonym", - "paaH" - ], - [ - "gene_synonym", - "ydbU" - ], - [ - "gene_synonym", - "EcoGene:EG13742" - ] - ], - "dna_sequence": "ATGATGATAAATGTGCAAACTGTGGCAGTGATTGGGAGCGGCACCATGGGGGCAGGCATTGCTGAAGTTGCTGCCAGTCATGGACACCAGGTTTTACTGTATGACATTTCTGCTGAAGCGCTGACCCGCGCAATCGACGGGATACACGCGCGGCTAAATTCACGCGTGACGCGGGGAAAACTGACTGCTGAAACCTGTGAACGCACATTGAAACGCCTGATCCCGGTGACCGATATTCACGCGCTGGCAGCTGCGGACCTGGTCATTGAAGCGGCGTCTGAACGTCTGGAAGTCAAAAAAGCGCTCTTTGCACAGCTGGCGGAAGTTTGCCCGCCACAAACGCTATTGACCACTAACACTTCGTCAATCTCTATAACCGCGATTGCTGCGGAGATAAAAAATCCTGAACGTGTTGCGGGGCTGCATTTTTTTAACCCGGCACCGGTGATGAAGTTGGTGGAGGTGGTCAGTGGGCTGGCAACGGCGGCGGAAGTTGTTGAGCAGTTGTGTGAACTAACGTTGAGTTGGGGTAAGCAGCCTGTGCGCTGTCATTCGACTCCTGGATTTATCGTTAACCGTGTTGCGCGTCCTTATTATTCCGAGGCCTGGCGGGCACTGGAAGAGCAGGTTGCTGCACCAGAAGTGATTGACGCTGCACTTCGCGATGGCGCTGGTTTCCCGATGGGGCCGCTGGAATTAACCGATCTGATTGGTCAGGACGTCAATTTTGCTGTCACCTGTTCGGTGTTTAACGCTTTCTGGCAGGAGCGTCGTTTTTTACCTTCGCTGGTGCAACAGGAACTGGTGATTGGTGGACGGTTGGGCAAGAAAAGTGGGCTGGGCGTGTACGACTGGCGCGCGGAACGTGAGGCAGTTGTTGGCCTGGAAGCGGTAAGCGACAGTTTTAGCCCAATGAAAGTAGAAAAGAAAAGTGACGGTGTCACGGAAATTGACGATGTTTTATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAACCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGCGTGGCCTCTGAACAGGATATCGATACCGCCATGCGTCTTGGGGTGAATTATCCATATGGCCCACTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAA", 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"gene_synonym", - "ASAP:ABE-0004666" - ], - [ - "gene_synonym", - "JW1391" - ], - [ - "gene_synonym", - "GI:16129357" - ], - [ - "gene_synonym", - "ECK1393" - ], - [ - "gene_synonym", - "GeneID:945265" - ], - [ - "gene_synonym", - "EcoGene:EG13743" - ], - [ - "gene_synonym", - "paaI" - ], - [ - "gene_synonym", - "NP_415914.1" - ], - [ - "gene_synonym", - "ydbV" - ] - ], - "dna_sequence": "ATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCGGGCAGCTATTTTCACTGGCTGATACTGCCTTTGCCTACGCCTGCAATAGCCAGGGGCTGGCAGCCGTCGCTTCTGCCTGCACGATTGATTTTTTGCGTCCAGGCTTTGCCGGAGACACCTTAACTGCTACTGCGCAGGTACGTCATCAGGGCAAGCAAACCGGTGTTTACGACATCGAAATTGTTAACCAACAACAAAAAACGGTTGCGCTGTTTCGCGGTAAATCTCACCGCATCGGCGGCACCATTACAGGAGAAGCCTGA", - "dna_sequence_length": 423, - "functions": [ - "hydroxyphenylacetyl-CoA thioesterase" - ], - "id": "CDS_1384", - "location": [ - [ - "NC_000913", - 1460471, - "+", - 423 - ] - ], - "md5": "9f9c94f59c1ec5403ca04477d3c0ed91", - "parent_gene": "", - "protein_md5": "697c3d0cb0d7d715ab250a6da9e952d0", - "protein_translation": "MSHKAWQNAHAMYENDACAKALGIDIISMDEGFAVVTMTVTAQMLNGHQSCHGGQLFSLADTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIVNQQQKTVALFRGKSHRIGGTITGEA", - "protein_translation_length": 140, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129358" - ], - [ - "gene_synonym", - "b1397" - ], - [ - "gene_synonym", - "EcoGene:EG13744" - ], - [ - "gene_synonym", - "ASAP:ABE-0004668" - ], - [ - "gene_synonym", - "JW1392" - ], - [ - "gene_synonym", - "NP_415915.1" - ], - [ - "gene_synonym", - "ECK1394" - ], - [ - "gene_synonym", - "paaJ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C7L2" - ], - [ - "gene_synonym", - "GeneID:946121" - ], - [ - "gene_synonym", - "ydbW" - ] - ], - "dna_sequence": "ATGCGTGAAGCCTTTATTTGTGACGGAATTCGTACGCCAATTGGTCGCTACGGCGGGGCATTATCAAGTGTTCGGGCTGATGATCTGGCTGCTATCCCTTTGCGGGAACTGCTGGTGCGAAACCCGCGTCTCGATGCGGAGTGTATCGATGATGTGATCCTCGGCTGTGCTAATCAGGCGGGAGAAGATAACCGTAACGTAGCCCGGATGGCGACTTTACTGGCGGGGCTGCCGCAGAGTGTTTCCGGCACAACCATTAACCGCTTGTGTGGTTCCGGGCTGGACGCACTGGGGTTTGCCGCACGGGCGATTAAAGCGGGCGATGGCGATTTGCTGATCGCCGGTGGCGTGGAGTCAATGTCACGGGCACCGTTTGTTATGGGCAAGGCAGCCAGTGCATTTTCTCGTCAGGCTGAGATGTTCGATACCACTATTGGCTGGCGATTTGTGAACCCGCTCATGGCTCAGCAATTTGGAACTGACAGCATGCCGGAAACGGCAGAGAATGTAGCTGAACTGTTAAAAATCTCACGAGAAGATCAAGATAGTTTTGCGCTACGCAGTCAGCAACGTACGGCAAAAGCGCAATCCTCAGGCATTCTGGCTGAGGAGATTGTTCCGGTTGTGTTGAAAAACAAGAAAGGTGTTGTAACAGAAATACAACATGATGAGCATCTGCGCCCGGAAACGACGCTGGAACAGTTACGTGGGTTAAAAGCACCATTTCGTGCCAATGGGGTGATTACCGCAGGCAATGCTTCCGGGGTGAATGACGGAGCCGCTGCGTTGATTATTGCCAGTGAACAGATGGCAGCAGCGCAAGGACTGACACCGCGGGCGCGTATCGTAGCCATGGCAACCGCCGGGGTGGAACCGCGCCTGATGGGGCTTGGTCCGGTGCCTGCAACTCGCCGGGTGCTGGAACGCGCAGGGCTGAGTATTCACGATATGGACGTGATTGAACTGAACGAAGCGTTCGCGGCCCAGGCGTTGGGTGTACTACGCGAATTGGGGCTGCCTGATGATGCCCCACATGTTAACCCCAACGGAGGCGCTATCGCCTTAGGCCATCCGTTGGGAATGAGTGGTGCCCGCCTGGCACTGGCTGCCAGCCATGAGCTGCATCGGCGTAACGGTCGTTACGCATTGTGCACCATGTGCATCGGTGTCGGTCAGGGCATCGCCATGATTCTGGAGCGTGTTTGA", 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"EcoGene:EG13745" - ], - [ - "gene_synonym", - "b1398" - ], - [ - "gene_synonym", - "NP_415916.1" - ], - [ - "gene_synonym", - "GeneID:945963" - ], - [ - "gene_synonym", - "JW5218" - ], - [ - "gene_synonym", - "ECK1395" - ], - [ - "gene_synonym", - "paaK" - ] - ], - "dna_sequence": "ATGATAACCAATACAAAGCTTGACCCGATTGAAACCGCGTCTGTTGATGAGTTACAGGCGTTGCAAACACAGCGTCTGAAATGGACGCTCAAACACGCGTATGAAAATGTGCCGATGTATCGGCGCAAATTCGACGCAGCAGGCGTACATCCTGATGATTTCAGGGAACTTTCAGACCTGCGTAAATTTCCCTGTACCACCAAACAGGATCTGCGCGACAACTATCCCTTTGACACCTTTGCCGTGCCAATGGAACAAGTGGTGCGCATTCATGCTTCTTCGGGAACCACAGGTAAACCGACAGTTGTCGGCTATACGCAAAACGATATTGATAACTGGGCCAATATTGTAGCGCGTTCTTTGCGTGCGGCAGGGGGCTCGCCCAAAGACAAAATTCATGTTGCCTATGGTTACGGCCTGTTTACTGGTGGGCTGGGTGCGCACTATGGTGCCGAACGTCTGGGCGCTACGGTGATCCCGATGTCTGGCGGGCAGACGGAAAAACAAGCGCAACTGATCCGTGATTTTCAACCAGATATGATCATGGTTACGCCATCTTATTGCCTTAACCTGATTGAAGAGCTGGAGCGGCAGTTGGGCGGTGATGCCAGCGGTTGCTCGCTGCGGGTTGGAGTATTTGGTGCTGAGCCGTGGACACAGGCCATGCGTAAAGAGATTGAGCGTCGCCTGGGGATCACCGCACTGGATATTTATGGCCTGTCAGAAGTGATGGGGCCGGGGGTGGCGATGGAGTGTCTGGAAACTACCGACGGCCCAACCATTTGGGAAGATCATTTCTATCCTGAAATTGTTAATCCTCATGACGGCACACCGCTTGCCGATGGTGAACATGGCGAACTGTTATTCACCACGCTGACCAAAGAAGCATTGCCGGTCATTCGTTACCGCACGCGTGATTTAACCCGACTGTTACCAGGAACGGCGCGGACTATGCGCCGCATGGATCGCATCAGCGGACGCAGCGATGACATGTTGATTATTCGCGGTGTAAATGTCTTTCCGTCACAACTGGAAGAAGAGATTGTCAAATTCGAACATTTATCGCCGCATTACCAACTGGAGGTGAACCGCCGGGGGCATCTTGATTCACTTTCTGTGAAAGTGGAGTTGAAAGAAAGTAGCCTGACATTGACGCATGAGCAGCGTTGCCAGGTATGCCACCAGCTGCGCCATCGGATTAAGTCGATGGTGGGGATCTCTACCGATGTGATGATCGTTAACTGTGGCAGTATCCCGCGTTCAGAAGGCAAGGCGTGTCGGGTGTTTGATCTGCGCAATATTGTTGGTGCCTGA", 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"UniProtKB/Swiss-Prot:P76086" - ], - [ - "gene_synonym", - "JW1394" - ], - [ - "gene_synonym", - "paaX" - ], - [ - "gene_synonym", - "b1399" - ], - [ - "gene_synonym", - "ydbY" - ], - [ - "gene_synonym", - "EcoGene:EG13746" - ], - [ - "gene_synonym", - "GI:16129360" - ], - [ - "gene_synonym", - "ECK1396" - ] - ], - "dna_sequence": "ATGAGTAAACTTGATACTTTTATCCAACATGCTGTAAACGCTGTTCCGGTCAGTGGCACATCTTTGATCTCCTCTCTGTATGGTGATTCGCTTTCCCATCGTGGTGGTGAAATCTGGTTGGGTAGTCTGGCTGCTTTGCTGGAAGGGCTGGGATTTGGTGAGCGTTTCGTGCGCACCGCTTTGTTTCGTCTTAATAAAGAAGGCTGGCTGGATGTTTCCCGCATCGGGCGACGCAGTTTCTATAGCCTCAGTGATAAAGGCTTGCGCCTGACGCGACGGGCAGAAAGTAAAATTTATCGCGCAGAGCAACCTGCATGGGATGGTAAATGGCTCCTGTTGCTCTCGGAAGGTTTAGATAAATCAACGCTGGCTGATGTCAAAAAGCAGTTGATCTGGCAAGGTTTTGGCGCACTGGCACCCAGCCTGATGGCATCGCCGTCGCAAAAACTGGCCGATGTACAGACACTTTTGCATGAAGCGGGTGTGGCGGATAACGTGATTTGTTTTGAAGCGCAAATACCACTGGCGCTTTCTCGCGCAGCACTGCGTGCCAGAGTAGAAGAGTGCTGGCATTTAACTGAACAAAATGCCATGTACGAAACCTTTATTCAGTCATTCCGCCCGCTGGTGCCGCTTTTAAAAGAGGCGGCAGACGAGTTAACCCCGGAGCGGGCATTTCATATTCAGCTTTTACTGATCCATTTTTATCGCCGTGTCGTCCTTAAAGACCCATTGTTGCCGGAGGAGTTGCTTCCGGCACACTGGGCAGGGCATACGGCGCGTCAGCTGTGTATCAACATTTATCAGCGCGTAGCGCCTGCTGCTTTAGCGTTCGTTAGTGAAAAAGGTGAAACCTCGGTCGGTGAACTGCCTGCGCCGGGAAGCCTGTATTTTCAACGTTTTGGCGGCTTGAATATTGAACAGGAGGCGTTATGCCAATTTATCAGATAG", - "dna_sequence_length": 951, - "functions": [ - "transcriptional repressor of phenylacetic acid degradation paa operon, phenylacetyl-CoA inducer" - ], - "id": "CDS_1387", - "location": [ - [ - "NC_000913", - 1463539, - "+", - 951 - ] - ], - "md5": "1fa398b58aba752d531855fb08091412", - "parent_gene": "", - "protein_md5": "70054024c316ccad1f86710ab6516372", - "protein_translation": "MSKLDTFIQHAVNAVPVSGTSLISSLYGDSLSHRGGEIWLGSLAALLEGLGFGERFVRTALFRLNKEGWLDVSRIGRRSFYSLSDKGLRLTRRAESKIYRAEQPAWDGKWLLLLSEGLDKSTLADVKKQLIWQGFGALAPSLMASPSQKLADVQTLLHEAGVADNVICFEAQIPLALSRAALRARVEECWHLTEQNAMYETFIQSFRPLVPLLKEAADELTPERAFHIQLLLIHFYRRVVLKDPLLPEELLPAHWAGHTARQLCINIYQRVAPAALAFVSEKGETSVGELPAPGSLYFQRFGGLNIEQEALCQFIR", - "protein_translation_length": 316, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415918.1" - ], - [ - "gene_synonym", - "GeneID:945965" - ], - [ - "gene_synonym", - "ASAP:ABE-0004676" - ], - [ - "gene_synonym", - "JW1395" - ], - [ - "gene_synonym", - "paaY" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77181" - ], - [ - "gene_synonym", - "GI:16129361" - ], - [ - "gene_synonym", - "ydbZ" - ], - [ - "gene_synonym", - "ECK1397" - ], - [ - "gene_synonym", - "EcoGene:EG13747" - ], - [ - "gene_synonym", - "b1400" - ] - ], - "dna_sequence": "ATGCCAATTTATCAGATAGACGGTCTGACTCCGGTTGTGCCAGAAGAGAGTTTTGTCCATCCGACAGCGGTATTGATCGGCGATGTTATTCTCGGCAAGGGCGTTTACGTTGGGCCAAATGCCAGCCTGCGTGGCGATTTTGGTCGTATCGTGGTGAAAGATGGCGCGAACATTCAGGATAATTGCGTTATGCACGGTTTTCCCGAGCAGGATACTGTTGTAGGAGAAGATGGACATATTGGTCATAGCGCTATCCTTCACGGCTGCATTATCCGCCGCAATGCATTAGTGGGAATGAACGCGGTAGTGATGGACGGTGCGGTGATTGGCGAGAACAGCATTGTTGGTGCATCCGCATTTGTGAAAGCCAAAGCAGAAATGCCAGCTAATTACCTGATTGTCGGCAGCCCGGCGAAAGCGATTCGTGAACTCAGTGAGCAGGAGTTGGCATGGAAAAAGCAGGGTACGCATGAGTACCAGGTGCTGGTGACACGCTGTAAGCAGACGTTACATCAAGTCGAGCCATTGCGGGAAATTGAACCTGGCAGGAAACGCCTGGTATTTGATGAGAATCTGCGACCGAAACAGTAA", - "dna_sequence_length": 591, - "functions": [ - "thioesterase required for phenylacetic acid degradation", - "trimeric", - "phenylacetate regulatory and detoxification protein", - "hexapeptide repeat protein" - ], - "id": "CDS_1388", - "location": [ - [ - "NC_000913", - 1464471, - "+", - 591 - ] - ], - "md5": "44e2eb4c4864256614a2a85e6cfded11", - "parent_gene": "", - "protein_md5": "8d12e3b6884a8ed838c8d18491ec2317", - "protein_translation": "MPIYQIDGLTPVVPEESFVHPTAVLIGDVILGKGVYVGPNASLRGDFGRIVVKDGANIQDNCVMHGFPEQDTVVGEDGHIGHSAILHGCIIRRNALVGMNAVVMDGAVIGENSIVGASAFVKAKAEMPANYLIVGSPAKAIRELSEQELAWKKQGTHEYQVLVTRCKQTLHQVEPLREIEPGRKRLVFDENLRPKQ", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14479" - ], - [ - "gene_synonym", - "GeneID:7751614" - ], - [ - "gene_synonym", - "ynbG" - ], - [ - "gene_synonym", - "YP_002791240.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P600" - ], - [ - "gene_synonym", - "ECK4489" - ], - [ - "gene_synonym", - "b4674" - ], - [ - "gene_synonym", - "GI:226524713" - ] - ], - "dna_sequence": "ATGAAATATATAAATTGTGTATATAATATAAATTACAAATTAAAACCACATTCTCATTATAAATAA", - "dna_sequence_length": 66, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1389", - "location": [ - [ - "NC_000913", - 1465230, - "-", - 66 - ] - ], - "md5": "cf39eab377a0da2b3e31fc7416485630", - "parent_gene": "", - "protein_md5": "0b49cb6558b97aea58066cbb482c6790", - "protein_translation": "MKYINCVYNINYKLKPHSHYK", - "protein_translation_length": 21, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5802" - ], - [ - "gene_synonym", - "ASAP:ABE-0004680" - ], - [ - "gene_synonym", - "ydbA" - ], - [ - "gene_synonym", - "b4492" - ], - [ - "gene_synonym", - "ASAP:ABE-0004694" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33666" - ], - [ - "gene_synonym", - "EcoGene:EG11307" - ], - [ - "gene_synonym", - "ECK1398" - ], - [ - "gene_synonym", - "GeneID:2847750" - ], - [ - "gene_synonym", - "JW1402" - ], - [ - "gene_synonym", - "ASAP:ABE-0285093" - ] - ], - "dna_sequence": "ATGCAAAGGAAAACTCTATTGTCGGCCTGTATTGCATTAGCTCTGAGTGGTCAGGGTTGGGCGGCAGATATCACAGAGGTAGAAACCACCACAGGTGAAAAGAAAAATACCAATGTGACTTGTCCGGCAGACCCAGGAAAACTCAGTCCGGAAGAGCTTAAACGCTTACCCTCTGAATGCTCTCCTTTAGTCGAACAAAACCTGATGCCATGGCTTTCCACAGGCGCTGCTGCGTTAATCACGGCCTTAGCCGTAGTGGAACTAAACGACGATGATGATCATCATCATCGCAACAATTCTCCACTCCCACCGACACCCCCTGATGATGAATCAGACGACACTCCAGTTCCCCCAACTCCTGGCGGAGATGAGATAATACCGGACGATCCGGATGATACGCCTACACCTCCCAAACCGGTTTCGTTTAATAATGACGTTATTCTCGATAAAACAGAAAAAACGTTAACTATTCGCGATTCAGTTTTTACTTATACCGAGAATGCTGACGGGACTATATCTCTGCAAGATAGCAATGGTCGTAAGGCAACGATTAATCTTTGGCAGATTGATGAAGCGAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATATTGTTGTTTCCGATACTGGATCGATTGGCGTGCTCATCAACGGTGAGGGGGCAACAGTATCCAATACGGGTGATGTTAACGTTAGCAATGAAGCGACAGGGTTCAGCATCACAACCAACAGTGGGAAGGTTTCGCTGGCAGGCAGTATGCAGGTTGGCGATTTCTCGACCGGGGTAGATCTTAATGGCAACAATAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGATAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAGTGAGGTTACTTCTCGTCAGAGTAATTTATTTGATGGCAGCGCAGAGAAAACGTCAGGTCTGGTTGTGATTGGCGATGGCAATACCGTTAATATGAATGGTGGACTTGAACTGATTGGAGAGAAAAACGCGCTTGCAGATGGGTCGCAGGTTACTTCCTTGCGCACAGGATATAGTTATACCAGCGTTATTGTCGTTAGTGGTGAGTCGTCGGTATATCTGAATGGAGATACGACAATCAGCGGAGAATTCCCTCTGGGGTTTGCCGGGGTTATTCGGGTACAGGATAAAGCTTTGCTGGAAATTGGCAGTGGCGCTACGCTAACAATGCAGGATATTGACAGTTTTGAACATCATGGGACAAGAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGCTACTAACGGAGGGAGCGCCACTAATGCAGGTACGATCACAGGTAAAGTGACGGAACAACATAGCGTATTTAACAAGTATTCAACGGGCACATCGAATTCATTTATTTTTAATAACGATGTCAGTAGCATAACAGGGTTAGTCGCTCAATCGAATAGCACAATTATCAATACTGACAGCGGCATCATTGATTTGTATGGTCGTGGTAGTGTCGGCATGCTTGCTATAGCAGATTCAACAGCAGAAAATCAGGGTAAAATTACACTGGATTCTATGTGGGTAGATGCAAATGACACTACCGCAATGCGAGATATAGCTAGCAACAGCGCCATTGACTTCGGTACAGGTGTGGGAGTTGGTACTGATAGTTATAGTGGTGCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCGAAAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCAGGCGTTTTATAACGATGGCACAGGAACAATTGTTAACTATGGTACAATCTGCACTTTCGGCGTGTGCCAATCGGGGAATGAGTACAATAATACAGATGATTTCACCTCACTGATCTATACCGGTGGCGATACGATTACACGAAGCGGAGAAACTGTAACGCTAAATAAATCTGCTGCTGTGACTGATAAGCTGGCTGGGAATGTTGTTAATAGCGGAACGCTTTCCGGTGATCAAATTACGGTATCAAGCGGTCTTCTGGAAAATACCAGCGGTGGCATCATCAATAACTTAGTAAAACTTGACAAGGGTGCCGTCATTAAAAATGCCGGGGTGATGACGAATAACGTCGATGTTAGCGGTGGAATCCTCAATAATGCCGGAGAAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGTGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTCTTTAATAATCAAACTGACGGGGCGATTATGAGAGGTGCTGCGCTGACAGGTACTGCAGTGGCAAATAACGAAGGAACCTGGAACCTCGGAAGTAGTAGTGAGGGTAACAACACCGGGATGCTGGAAGTTAATAATAATTCAGCTTTCAATAACCGCGGCGAGTTTATTCTTGATAACGACAAGAATGCTGTGCACATCAACCAGTCCGGTACGCTTTATAATACCGGTCACATGAACATCAGTAATTCTTCCCACAACGGAGCCGTTAATATGTGGGGCGGAAATGGTCGTTTTATCAATGACGGAACGATTGATGTTTCTGCGAAGTCACTGGTAGTCAGCGCTAATAATGCCGGCGATCAGAATGCCTTCTTCTGGAACCAGGATAACGGGGTCATCAACTTCGATCACGACAGCGCCAGTGCCGTGAAAGTCACCCACAGCAACTTTATTGCCCAGAATGACGGCATCATGAACATCAGCGGCACCGGTGCTGTGGCTATGGAAGGTGATAAGAACGCGCAGCTGGTTAACAATGGCACCATCAACCTCGGTACCGCAGGCACTACTGACACGGGTATGATCGGTATGCAACTCGATGCCAACGCCACGGCGGATGCGGTAATCGAAAACAACGGCACCATCAATATCTTCGCCAATGACTCGTTTGCATTTAGCGTACTGGGTACAGTAGGTCATGTGGTTAACAACGGCACGGTGGTGATTGCCGATGGGGTTACGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTGGTATGGACTGCCAAAGGCAGCACCGATGCCAGCGGTAACGTTGACGTCACCATGAGCAAAAATGCCTACACCGATGTGGCAACAGATGCCTCGGTGAATGACATCGCGAAAGCACTGGATGCGGGTTACACCAACAACGAACTGTTTACCAGCCTGAACGTCGGCACGACTGCTGAACTGAACAGTGCTCTGAAACAGGTCAGCGGTAGCCAGGCGACCACGGTATTCCGCGAAGCGCGCGTGTTAAGCAACCGCTTTAGTATGCTGGCAGATGCCGCGCCGAAAGTGGGTAACGGTCTGGCGTTCAACGTTGTCGCGAAAGGCGATCCGCGTGCCGAGTTAGGTAATAATACCGAATACGACATGCTGGCATTGCGTAAAACTATCGACCTGAGCGAAAGCCAGACGATGAGTCTGGAGTACGGTATCGCTCGTCTCGATGGTGATGGTGCGCAGAAAGCGGGTGATAATGGCGTTACAGGCGGTTATAGCCAGTTTTTTGGCCTGAAACATCAGATGTCGTTCGATAACGGCATGAACTGGAATAACGCCTTGCGTTACGACGTTCACAACCTTGACAGCAGCCGCTCGATTGCATTTGGCAACACGAACAAAACGGCTGATACCGACGTGAAACAGCAGTACCTGGAGTTCCGCAGCGAAGGGGCGAAGACTTTCGAACCGAGCGAAGGACTGAAGGTTACGCCATATGCGGGTGTAAAACTGCGTCACACACTGGAAGGTGGCTATCAGGAGCGCAATGCCGGAGACTTTAACCTGAATATGAACAGTGGCAGCGAAACGGCGGTGGACAGCATCGTCGGGCTGAAACTGGACTACGCAGGTAAAGACGGCTGGAGCGCTAGCGCTACGCTGGAAGGCGGGCCGAACCTGAGCTACGCGAAGAGCCAGCGTACGGCAAGCCTGGCAGGCGCAGGCAGTCAGCACTTTAACGTCGATGACGGTCAGAAGGGCGGCGGCATCAATAGCCTGACAAGCGTCGGCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAA", - "dna_sequence_length": 6063, - "id": "CDS_1390", - "location": [ - [ - "NC_000913", - 1465392, - "+", - 2513 - ], - [ - "NC_000913", - 1469241, - "+", - 53 - ], - [ - "NC_000913", - 1470517, - "+", - 3497 - ] - ], - "md5": "e272175196382e89cb721c1264f40e1a", - "parent_gene": "", - "protein_md5": "66e75799b3e258eb1eef06e96b239148", - "protein_translation": "MQRKTLLSACIALALSGQGWAADITEVETTTGEKKNTNVTCPADPGKLSPEELKRLPSECSPLVEQNLMPWLSTGAAALITALAVVELNDDDDHHHRNNSPLPPTPPDDESDDTPVPPTPGGDEIIPDDPDDTPTPPKPVSFNNDVILDKTEKTLTIRDSVFTYTENADGTISLQDSNGRKATINLWQIDEANNTVALEGVSADGATKWQYNHNGELVITGDNATVNNNGKTTVDGKDSTGTEINGNNGKVIQDGDLDVSGGGHGIDITGDSATVDNKGTMTVTDPESMGIQIDGDKAIVNNEGESTITNGGTGTQINGDDATANNNGKTTVDGKDSTGTEINGNNGKVIQDGDLDVSGGGHGIDITGDSATVDNKGTMTVTDPESIGIQVDGDQAVVNNEGESAITNGGTGTQINGDDATANNNGKTTVDGKDSTGTEIAGNNGKVIQDGDLDVSGGGHGIDITGDSATVDNKGTMTVTDPESIGIQIDGDQAIVNNEGESTITNGGTGTQINGNDATANNSGKTTVDGKDSTGTKIAGNIGIVNLDGSLTVTGGAHGVENIGDNGTVNNKGDIVVSDTGSIGVLINGEGATVSNTGDVNVSNEATGFSITTNSGKVSLAGSMQVGDFSTGVDLNGNNNSVTLAAKDLKVVGQKATGINVSGDANTVNITGNVLVDKDKTADNAAEYFFDPSVGINVYGSDNNVTLDGKLTVVSDSEVTSRQSNLFDGSAEKTSGLVVIGDGNTVNMNGGLELIGEKNALADGSQVTSLRTGYSYTSVIVVSGESSVYLNGDTTISGEFPLGFAGVIRVQDKALLEIGSGATLTMQDIDSFEHHGTRTPELTYADSGAKIVNKGTVEIQNLGFAFVTGENTTGINSGTISLLQNGKDPAPSPIVLLATNGGSATNAGTITGKVTEQHSVFNKYSTGTSNSFIFNNDVSSITGLVAQSNSTIINTDSGIIDLYGRGSVGMLAIADSTAENQGKITLDSMWVDANDTTAMRDIASNSAIDFGTGVGVGTDSYSGAGKNATAINQLGGVITIYNAGAGMAAYGASNTVINQGTINLEKNGNYDDSLAANTLVGMAVYEHGTAINDQTGVININVGTGQAFYNDGTGTIVNYGTICTFGVCQSGNEYNNTDDFTSLIYTGGDTITRSGETVTLNKSAAVTDKLAGNVVNSGTLSGDQITVSSGLLENTSGGIINNLVKLDKGAVIKNAGVMTNNVDVSGGILNNAGEMTAQITMNAGADSSLVNNTGTINKIVQNAGVFNNSGSVTGRMMSAGGVFNNQTDGAIMRGAALTGTAVANNEGTWNLGSSSEGNNTGMLEVNNNSAFNNRGEFILDNDKNAVHINQSGTLYNTGHMNISNSSHNGAVNMWGGNGRFINDGTIDVSAKSLVVSANNAGDQNAFFWNQDNGVINFDHDSASAVKVTHSNFIAQNDGIMNISGTGAVAMEGDKNAQLVNNGTINLGTAGTTDTGMIGMQLDANATADAVIENNGTINIFANDSFAFSVLGTVGHVVNNGTVVIADGVTGSGLIKQGDSINVEGMNGNNGNSSEVHYGDYTLPDVPKPNTVSVTSGSDEAGGSMNNLNGYVVGTNVNGSAGKLKVNNASMNGVEINTGFTAGTADTTVSFDNVVEGSNLTDADAITSTSVVWTAKGSTDASGNVDVTMSKNAYTDVATDASVNDIAKALDAGYTNNELFTSLNVGTTAELNSALKQVSGSQATTVFREARVLSNRFSMLADAAPKVGNGLAFNVVAKGDPRAELGNNTEYDMLALRKTIDLSESQTMSLEYGIARLDGDGAQKAGDNGVTGGYSQFFGLKHQMSFDNGMNWNNALRYDVHNLDSSRSIAFGNTNKTADTDVKQQYLEFRSEGAKTFEPSEGLKVTPYAGVKLRHTLEGGYQERNAGDFNLNMNSGSETAVDSIVGLKLDYAGKDGWSASATLEGGPNLSYAKSQRTASLAGAGSQHFNVDDGQKGGGINSLTSVGVKYSSKESSLNLDAYNWKEDGISDKGVMLNFKKTF", - "protein_translation_length": 2020, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF54" - ], - [ - "gene_synonym", - "ASAP:ABE-0004683" - ], - [ - "gene_synonym", - "EcoGene:EG40004" - ], - [ - "gene_synonym", - "GeneID:945952" - ], - [ - "gene_synonym", - "NP_415920.1" - ], - [ - "gene_synonym", - "GI:16129363" - ], - [ - "gene_synonym", - "ECK0358" - ], - [ - "gene_synonym", - "insD1" - ], - [ - "gene_synonym", - "b1402" - ] - ], - "dna_sequence": "GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG", - "dna_sequence_length": 906, - "functions": [ - "IS2 transposase TnpB" - ], - "id": "CDS_1391", - "location": [ - [ - "NC_000913", - 1468826, - "-", - 906 - ] - ], - "md5": "d7a869f3d04f69c9bbc5e3da4131ca74", - "parent_gene": "", - "protein_md5": "e9d0a5629c6cb4141f55451e6130cec7", - "protein_translation": "MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI", - "protein_translation_length": 301, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "insC1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004685" - ], - [ - "gene_synonym", - "GeneID:945967" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF41" - ], - [ - "gene_synonym", - "EcoGene:EG40003" - ], - [ - "gene_synonym", - "NP_415921.2" - ], - [ - "gene_synonym", - "ECK0357" - ], - [ - "gene_synonym", - "GI:145698254" - ], - [ - "gene_synonym", - "b1403" - ] - ], - "dna_sequence": "ATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAA", - "dna_sequence_length": 366, - "functions": [ - "IS2 repressor TnpA" - ], - "id": "CDS_1392", - "location": [ - [ - "NC_000913", - 1469149, - "-", - 366 - ] - ], - "md5": "9ed51bec276857ffa1620cbb329c920f", - "parent_gene": "", - "protein_md5": "2766fdd4e9e285df2a70f8c10f901f65", - "protein_translation": "MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG40009" - ], - [ - "gene_synonym", - "NP_415922.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF89" - ], - [ - "gene_synonym", - "ASAP:ABE-0004691" - ], - [ - "gene_synonym", - "GeneID:945968" - ], - [ - "gene_synonym", - "ECK0258" - ], - [ - "gene_synonym", - "insI1" - ], - [ - "gene_synonym", - "GI:16129365" - ], - [ - "gene_synonym", - "b1404" - ] - ], - "dna_sequence": "ATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGTTAAGGGATACTGGCGGCATAAAACCCCATGAGCGTAAGCGGGCTGTAGCTCACCTGACACTGTCTGAGCGCGAGGAGATACGAGCTGGTTTGTCAGCCAAAATGAGCATTCGTGCGATAGCTACTGCGCTGAATCGCAGTCCTTCGACGATCTCACGTGAAGTTCAGCGTAATCGGGGCAGACGCTATTACAAAGCTGTTGATGCTAATAACCGAGCCAACAGAATGGCGAAAAGGCCAAAACCGTGCTTACTGGATCAAAATTTACCATTGCGAAAGCTTGTTCTGGAAAAGCTGGAGATGAAATGGTCTCCAGAGCAAATATCAGGATGGTTAAGGCGAACAAAACCACGTCAAAAAACGCTGCGAATATCACCTGAGACAATTTATAAAACGCTGTACTTTCGTAGCCGTGAAGCGCTACACCACCTGAATATACAGCATCTGCGACGGTCGCATAGCCTTCGCCATGGCAGGCGTCATACCCGCAAAGGCGAAAGAGGTACGATTAACATAGTGAACGGAACACCAATTCACGAACGTTCCCGAAATATCGATAACAGACGCTCTCTAGGGCATTGGGAGGGCGATTTAGTCTCAGGTACAAAAAACTCTCATATAGCCACACTTGTAGACCGAAAATCACGTTATACGATCATCCTTAGACTCAGGGGCAAAGATTCTGTCTCAGTAAATCAGGCTCTTACCGACAAATTCCTGAGTTTACCGTCAGAACTCAGAAAATCACTGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGA", - "dna_sequence_length": 1152, - "functions": [ - "IS30 transposase" - ], - "id": "CDS_1393", - "location": [ - [ - "NC_000913", - 1469358, - "+", - 1152 - ] - ], - "md5": "ec0d30272e812b24142e8fb5ab3917b7", - "parent_gene": "", - "protein_md5": "29e5a3b611b13a57961d86c92192eefc", - "protein_translation": "MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRGRRYYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQKTLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEGDLVSGTKNSHIATLVDRKSRYTIILRLRGKDSVSVNQALTDKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIRQYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD", - "protein_translation_length": 383, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004698" - ], - [ - "gene_synonym", - "NP_415924.1" - ], - [ - "gene_synonym", - "ydbC" - ], - [ - "gene_synonym", - "GeneID:945980" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25906" - ], - [ - "gene_synonym", - "EcoGene:EG11309" - ], - [ - "gene_synonym", - "GI:16129367" - ], - [ - "gene_synonym", - "ECK1399" - ], - [ - "gene_synonym", - "b1406" - ], - [ - "gene_synonym", - "JW1403" - ] - ], - "dna_sequence": "ATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGACCTGACAATTGTCACTAAAATTGGTGCGCGGCGTGGAGAGGACGCATCCTGGTTGCCCGCATTTTCTCCGGCAGAGCTGCAAAAAGCGGTGCACGATAATCTACGTAATCTCGGGCTGGACGTGCTGGATGTGGTTAACCTGCGCGTTATGATGGGGGATGGTCATGGCCCAGCGGAAGGATCGATTGAGGCCAGCCTGACCGTGCTGGCAGAGATGCAACAACAAGGCCTGGTAAAACATATTGGCCTGAGCAACGTCACACCGACGCAGGTTGCAGAGGCGCGCAAGATTGCCGAAATTGTCTGTGTGCAAAACGAATACAACATCGCGCACCGTGCTGATGATGCAATGATTGATGCTTTGGCCCACGATGGCATTGCCTACGTGCCGTTCTTCCCGCTCGGGGGCTTTACACCGCTGCAATCGTCCACACTTTCCGATGTTGCTGCGAGCCTGGGTGCAACACCAATGCAGGTGGCGCTGGCGTGGCTGTTACAGCGTTCACCGAATATTTTGCTGATCCCAGGGACGTCTTCGGTTGCGCATTTACGGGAGAATATGGCTGCTGAAAAATTGCATCTTTCTGAGGAAGTGTTGTCTACGTTGGATGGTATTTCGCGAGAATAA", - "dna_sequence_length": 861, - "functions": [ - "putative NAD(P)-binding oxidoreductase" - ], - "id": "CDS_1394", - "location": [ - [ - "NC_000913", - 1474221, - "+", - 861 - ] - ], - "md5": "f79cb691e2c19afdb5c0ffb31f2b6c89", - "parent_gene": "", - "protein_md5": "485cf2bd21128fd8bcaeb37bdeda982a", - "protein_translation": "MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPYSDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVTPTQVAEARKIAEIVCVQNEYNIAHRADDAMIDALAHDGIAYVPFFPLGGFTPLQSSTLSDVAASLGATPMQVALAWLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSEEVLSTLDGISRE", - "protein_translation_length": 286, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11310" - ], - [ - "gene_synonym", - "ASAP:ABE-0004701" - ], - [ - "gene_synonym", - "ECK1400" - ], - [ - "gene_synonym", - "ydbD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25907" - ], - [ - "gene_synonym", - "GeneID:945983" - ], - [ - "gene_synonym", - "GI:90111266" - ], - [ - "gene_synonym", - "NP_415925.2" - ], - [ - "gene_synonym", - "JW5221" - ], - [ - "gene_synonym", - "b1407" - ] - ], - "dna_sequence": "ATGTTGAAGGCCAGGAATTGCGGCTGGATACGTTTACTGCCCCTGTTTATGCTGAGTCTACCAGTACAGGCGGAACTTCGATGTGTTGCAAATGCAGTTGATATTGAATCATTTTTTTCTGCGGCTACCGCTGAAGATAAACAACAAGTTGAACAAGCTATCAACAGTAGCGTGAATCTTGTCCCCTTCGGTTTATCTGCATCGAACTGGAAAGTGCATCGTGGCGATTTAGTGGTAGAAGGTAATATAGAGAGTAATCAAAAATTGATTGTTCTTGGGAATTTGACAGTCAAAGGTAATATTTCCACTTTCTCTCTTTCTAATCCATGGGTTATTCTCGGTAACGTGACGGCAACGAATATAGTTGCGGATTCACCACTGTTAATTACCGGTTCGATAAATGCAAGTGGACTGGTATTTATCGACTCATATTACGATAATCCGTCTACGATTAAGGGGAGTATTAATGCGCGTGGGATATTTATCAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATTCGCATGGCAGGGAATGTCTGTAATCAGATGAAAAAAGAAGCGCTGTTTCGCCCTAAGCCTTCTCCTGAGTTAGTGCAAGAATTGCAAATGCTGGATGAAGGCAAAGTTGCTGCATTTGAAGGACGAGACATTGCGACATTTGATCTTGCCGTAATGCGAACTCTCCCAAGGCTTAAAGGAATTTCAGCTAACCTACGCAAACAACTTATTAATAGCAATGATGAACAAACGATTGAAAGTATGGCGAGATATATGCCTGACAATGAGATTCTGGAGTTGACCGATCAGCAATTGGGTTACCAGCCTGTTGTTCTGGGGTTGCTCGACCGTGAACCGCTCTCTGTCGAAATAATGACGCGAATGAGTCGTCTACCTGATGGTGTCGGTCCGTTGAATCTTGCGCTACGTGAAAATCTCCCTCTGGATATCGTCATGACTCTGGCGAAAAGAGATTGGGATATGATCATTCAGGAGCTTTATAAAGATGCGTGGTTATTGCCTGAATCCATTATTGATGGCTATATCCGCAGTGATGATTCCTCTATTCGTCAGGTCGGTGCTGGAGGACAACTCACCTACAATCAGGCAATGCAGTTGGCGAACGATTCATCAAACAATGTTGTCACAAGCTTAGCGTTCAAGCTGGCAGAGATGAAACACCATGGTCAATTGTTGCGGATGACGCCACAAGAGAGTGACAAAGTTGCAGGCTATTTATACCAAAAATTCGAGAATGACGATGATCTAATACGTGTGTTATTTTTAGCATTGCCAGATAACTTACAGTTTAATTTTGTTAAAAGGATGGAGAAAAAATCCCCGGCCTACTTTTGCTGTCGGGATATGCAGGTAATTCACTCTGACGCTGCTTTACAACGGTTATTGACACGTTTCAACGATCCTGAAGGGTGGAGTAATCTGGCGAAAAATCAGTATCTGAGCACGTCGATGAAACAAAAAATTTGGCAACGTGCTTTATCGCATCGGAAAAATAATCCGAAAGCAGATTCAGATGCATATGAAACCAGCGCTGATATGATTTTGTCTGAGCTGATTAGCCACGGCGAAGTTGATGACCAGATGCTATTAAATGCCACCGCCCTGATACGTTCGGACGACTGGGACTTTTTAGAGAGTGCATTAATTAGTTGGGATAATTTACCCGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGCGTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAAACAACCGGATCGTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTTCGGCGCACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGA", - "dna_sequence_length": 2307, - "functions": [ - "PF10971 family putative periplasmic methylglyoxal resistance protein" - ], - "id": "CDS_1395", - "location": [ - [ - "NC_000913", - 1475144, - "+", - 2307 - ] - ], - "md5": "a21a8a585df187114cccef9314dc1b95", - "parent_gene": "", - "protein_md5": "b830d9c98e3b64359614205f9291ce01", - "protein_translation": "MLKARNCGWIRLLPLFMLSLPVQAELRCVANAVDIESFFSAATAEDKQQVEQAINSSVNLVPFGLSASNWKVHRGDLVVEGNIESNQKLIVLGNLTVKGNISTFSLSNPWVILGNVTATNIVADSPLLITGSINASGLVFIDSYYDNPSTIKGSINARGIFINDIIAPVVASSTNSEFMVRASDKHDTENVKKALMIINPDAYYWGLINDEDALKEIFKRSNIRMAGNVCNQMKKEALFRPKPSPELVQELQMLDEGKVAAFEGRDIATFDLAVMRTLPRLKGISANLRKQLINSNDEQTIESMARYMPDNEILELTDQQLGYQPVVLGLLDREPLSVEIMTRMSRLPDGVGPLNLALRENLPLDIVMTLAKRDWDMIIQELYKDAWLLPESIIDGYIRSDDSSIRQVGAGGQLTYNQAMQLANDSSNNVVTSLAFKLAEMKHHGQLLRMTPQESDKVAGYLYQKFENDDDLIRVLFLALPDNLQFNFVKRMEKKSPAYFCCRDMQVIHSDAALQRLLTRFNDPEGWSNLAKNQYLSTSMKQKIWQRALSHRKNNPKADSDAYETSADMILSELISHGEVDDQMLLNATALIRSDDWDFLESALISWDNLPAVVLKELQQNTPRNDIWAKFFLRQENSSRAQVDEALRVYYALDPDALAQLDVLAKQPDRIWWSTLAKSNLTFFKFGALNNRHTPPAVLAAEIDPEWWIVAMNNPRFPVDVLKARLKRDPLLALELVNPELDLVRQLALNGKTRAIREQAMRKLDELY", - "protein_translation_length": 768, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ynbA" - ], - [ - "gene_synonym", - "ASAP:ABE-0004704" - ], - [ - "gene_synonym", - "GeneID:945973" - ], - [ - "gene_synonym", - "EcoGene:EG13748" - ], - [ - "gene_synonym", - "ECK1401" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76090" - ], - [ - "gene_synonym", - "GI:90111267" - ], - [ - "gene_synonym", - "b1408" - ], - [ - "gene_synonym", - "JW1405" - ], - [ - "gene_synonym", - "NP_415926.4" - ] - ], - "dna_sequence": "ATGACGCTCTACCAGATAAAACCGCTCTTTCAGTCGCTGTTAAGGCCGACGATGTTTTGGCTTTATAAGCACCACGTTACAGCGAATCACATCACTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGCTTTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTACCATTTTTATTTTTACCGGAAAGTAACGCATCACTCGTGATACTCATGTTATTTTGCACCATATTGACCGAGTTTTGCGGTTTACTCGCGCAGACGATTAACGGTGTTCGCAGTTATGCCGGTCCATTTGGCAAAAGCGATCGCGCGTTAATATTTGGTCTGTGGGGTCTGGCCGTTGCCATTTATCCACAGTGGATGCAGTGGAATAATCTTTTATGGAGCATTGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAA", - "dna_sequence_length": 606, - "functions": [ - "inner membrane protein" - ], - "id": "CDS_1396", - "location": [ - [ - "NC_000913", - 1477621, - "+", - 606 - ] - ], - "md5": "fb4a898c463c0e330b8b6f93842b23f6", - "parent_gene": "", - "protein_md5": "8776f6f0734e8e4da3d5838d71d3e3b6", - "protein_translation": "MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLLMLAAQPILFLLLPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVILMLFCTILTEFCGLLAQTINGVRSYAGPFGKSDRALIFGLWGLAVAIYPQWMQWNNLLWSIASILLLWTAINRCRSVLLMSAEI", - "protein_translation_length": 201, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ynbB" - ], - [ - "gene_synonym", - "ECK1402" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76091" - ], - [ - "gene_synonym", - "NP_415927.1" - ], - [ - "gene_synonym", - "EcoGene:EG13749" - ], - [ - "gene_synonym", - "ASAP:ABE-0004706" - ], - [ - "gene_synonym", - "GI:16129370" - ], - [ - "gene_synonym", - "b1409" - ], - [ - "gene_synonym", - "JW1406" - ], - [ - "gene_synonym", - "GeneID:945972" - ] - ], - "dna_sequence": "ATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGGTTACCGGAGAGAAAAGGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTGTTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTATTCCTCTTAACTATTTGCTTATCGGTTTTAATTGCTTTGAGCTGTTTCTGTTATTTATACCTTTGGCTGGGTTTCTGATATTAGCCACCGGGCAAGTTTTAGTGGGTGACCCCTCTGGTTTTCTGCATACCGTGAGCGCCATTTTTTGGGGCTGGATAATGACCGTTTTCGCCTTGAGTCATGCCGCCTGGTTATTAATGTTGCCAACCACAAATATCCAGGGCGGGGCGTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGTCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGTTACTGACACCGCTAAATACATTACAGGCATTATTAGCGGGTTTGTTAATTGGTATTAGTGGTTTTTGCGGCGATGTCGTGATGTCAGCCATCAAACGAGATATTGGTGTTAAAGATAGCGGAAAACTATTGCCAGGACATGGCGGACTCCTTGACAGGATTGACTCATTAATTTTCACCGCTCCGGTATTTTTTTATTTTATACGCTACTGCTGTTACTGA", - "dna_sequence_length": 897, - "functions": [ - "putative CDP-diglyceride synthase" - ], - "id": "CDS_1397", - "location": [ - [ - "NC_000913", - 1478226, - "+", - 897 - ] - ], - "md5": "ae5a4ecbce9787af9cc170e5593de926", - "parent_gene": "", - "protein_md5": "86f1435d79803d10963912079c47d749", - "protein_translation": "MLEKSLATLFALLILATLINRFLLWRLPERKGGEVTLRIRTWWGIVICFSMVISGPRWMTLTFFALISFLALKEYCTLISVHFPRWLYWGIPLNYLLIGFNCFELFLLFIPLAGFLILATGQVLVGDPSGFLHTVSAIFWGWIMTVFALSHAAWLLMLPTTNIQGGALLVLFLLALTESNDIAQYLWGKSCGRRKVVPKVSPGKTLEGLMGGVITIMIASLIIGPLLTPLNTLQALLAGLLIGISGFCGDVVMSAIKRDIGVKDSGKLLPGHGGLLDRIDSLIFTAPVFFYFIRYCCY", - "protein_translation_length": 298, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ynbC" - ], - [ - "gene_synonym", - "ECK1403" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76092" - ], - [ - "gene_synonym", - "EcoGene:EG13750" - ], - [ - "gene_synonym", - "GeneID:945970" - ], - [ - "gene_synonym", - "NP_415928.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004708" - ], - [ - "gene_synonym", - "GI:16129371" - ], - [ - "gene_synonym", - "b1410" - ], - [ - "gene_synonym", - "JW1407" - ] - ], - "dna_sequence": "ATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGTTTTATCGGCACTGGCCCGCTTTACAGCCCGGGGCGAAAAAGGTCATCGTCTTATTTCATCGCGGGCATGAACATTCTGGTCGTCTACAACATCTCGTTGATGAACTGGCGATGCCAGATACTGCTTTTTATGCCTGGGATGCCCGAGGGCATGGAAAAAGTTCGGGGCCGCGTGGTTATAGCCCATCTCTTGCGCGTTCAGTGCGGGATGTCGATGAATTTGTCCGTTTTGCTGCCAGCGACAGCCAGGTTGGACTGGAAGAGGTGGTAGTGATCGCGCAAAGCGTCGGCGCAGTGCTGGTTGCCACATGGATTCATGATTATGCACCTGCAATTCGCGGGCTGGTGCTGGCTTCTCCGGCCTTTAAGGTTAAATTGTATGTGCCGCTGGCACGTCCTGCGCTGGCGTTATGGCATCGTCTGCGTGGTCTGTTTTTTATTAATTCCTATGTGAAAGGACGCTATTTGACCCACGATCGGCAACGGGGGGCGAGTTTCAATAATGATCCGCTGATCACACGGGCGATTGCCGTTAATATCTTGCTCGATCTCTACAAAACGTCTGAACGTATTATTAGAGATGCGGCGGCGATTACGCTCCCCACGCAACTTCTGATATCAGGCGATGACTATGTGGTGCATCGCCAACCGCAGATTGATTTTTATCAGAGATTACGTAGCCCTCTGAAAGAGCTGCATCTGCTGCCAGGCTTTTATCACGACACGTTGGGTGAAGAGAACAGGGCGCTGGCATTTGAAAAAATGCAAAGCTTTATTAGTCGTTTATATGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGACCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGCCTGCATCTCGGAATGAGCACCGGCTTTGATTCAGGCAGTTCGCTGGATTATGTCTATCAAAATCAACCGCAAGGTAGTAACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGATCTCCACGCCAAAGGTTTAGCCGTCCGCGTGGTTGACATTGCCGCAGGGCATGGGCGCTATGTACTGGATGCGCTGGCAAACGAGCCTGCCGTAAGCGATATTTTGTTACGTGATTACAGCGAGTTAAATGTTGCACAGGGGCAAGAGATGATTGCTCAACGGGGAATGTCTGGGCGGGTGCGTTTTGAACAGGGCGATGCGTTTAACCCGGAGGAACTCAGCGCGTTAACTCCGCGGCCTACGCTGGCGATTGTCTCTGGCCTGTATGAGCTTTTTCCCGAAAATGAGCAGGTAAAAAACTCACTCGCAGGTCTTGCCAATGCCATCGAACCGGGCGGCATTCTCATCTACACCGGGCAGCCGTGGCACCCTCAACTGGAGATGATTGCCGGGGTGTTAACCAGTCATAAAGATGGTAAACCGTGGGTAATGCGCGTGCGTTCGCAAGGGGAGATGGATTCACTCGTGCGTGATGCCGGATTTGATAAATGCACACAACGGATTGATGAGTGGGGTATTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGA", - "dna_sequence_length": 1758, - "functions": [ - "putative esterase" - ], - "id": "CDS_1398", - "location": [ - [ - "NC_000913", - 1479138, - "+", - 1758 - ] - ], - "md5": "d0c7202390621eb818aadc889b8feb89", - "parent_gene": "", - "protein_md5": "a1b53ba806abe67b0e73166b9ea2c65e", - "protein_translation": "MENSRIPGEHFFTTSDNTALFYRHWPALQPGAKKVIVLFHRGHEHSGRLQHLVDELAMPDTAFYAWDARGHGKSSGPRGYSPSLARSVRDVDEFVRFAASDSQVGLEEVVVIAQSVGAVLVATWIHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHRLRGLFFINSYVKGRYLTHDRQRGASFNNDPLITRAIAVNILLDLYKTSERIIRDAAAITLPTQLLISGDDYVVHRQPQIDFYQRLRSPLKELHLLPGFYHDTLGEENRALAFEKMQSFISRLYANKSQKFDYQHEDCTGPSADRWRLLSGGPVPLSPVDLAYRFMRKAMKLFGTHSSGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLVDKIYLNSVGWRGIRQRKTHLQILIKQAVADLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDILLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNPEELSALTPRPTLAIVSGLYELFPENEQVKNSLAGLANAIEPGGILIYTGQPWHPQLEMIAGVLTSHKDGKPWVMRVRSQGEMDSLVRDAGFDKCTQRIDEWGIFTVSMAVRRDN", - "protein_translation_length": 585, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1404" - ], - [ - "gene_synonym", - "ASAP:ABE-0004710" - ], - [ - "gene_synonym", - "ynbD" - ], - [ - "gene_synonym", - "NP_415929.1" - ], - [ - "gene_synonym", - "GeneID:945985" - ], - [ - "gene_synonym", - "GI:16129372" - ], - [ - "gene_synonym", - "EcoGene:EG13751" - ], - [ - "gene_synonym", - "b1411" - ], - [ - "gene_synonym", - "JW1408" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76093" - ] - ], - "dna_sequence": "TTGCTACAAGGCGCTGGCTGGTTATTGTTGCTGGCCCCGTTTTTCTTCTTCACCTATGGATCTCTTAATCAGTTCACCGCGGTTCAGGACCTTAACAGCCATGATATCCCCAGTCAGGTATTCGGTTGGGAAACGGCGATCCCTTTTCTTCCCTGGACTATTGTTCCTTACTGGAGTCTGGATCTTTTATATGGATTTTCGCTGTTCGTTTGTAGCACGACATTCGAACAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGTCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTATTCTCTGCTGGCTACTTTGGCGTCACTTTCGTCAGCATCTGGCTGAGAGGTGGCGTAAAGTCTGCGGCGGATGGTTTTTACTCATCGCCATTTCGACGCTGACGACCTGGCAGCATCATTTTATTGATGTCATCACAGGGCTGGCGGTAGGTATGTTGATTGACTGGATGGTGCCCGTCGACCGTCGTTGGAATTATCAGAAACCTGATCAACGTCGAATCAAAATAGCACTGCCCTATGTCGTAGGCGCGGGCTCGTGCATTGTATTGATGGAGCTAATGATGATGATTCAGTTATGGTGGTCAGTCTGGTTATGTTGGCCAGTATTATCGCTACTCATAATTGGCCGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAACTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTTCCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGACACTGTAAAACCGTTAATGAAGCGATTAGCTATATTCGAGCCAGACGCCCGCAGATTGTGCTGACAGACGAGCACAAAGCGATGCTGAGATTATGGGAAAACAGGTAA", - "dna_sequence_length": 1293, - "functions": [ - "putative phosphatase inner membrane protein" - ], - "id": "CDS_1399", - "location": [ - [ - "NC_000913", - 1480909, - "+", - 1293 - ] - ], - "md5": "6f683d4f8294aac436117e177d682790", - "parent_gene": "", - "protein_md5": "57e8775dbd7a7eaec035b7e7f801f3e6", - "protein_translation": "MLQGAGWLLLLAPFFFFTYGSLNQFTAVQDLNSHDIPSQVFGWETAIPFLPWTIVPYWSLDLLYGFSLFVCSTTFEQRRLVHRLILATVMACCGFLLYPLKFSFIRPEVSGVTGWLFSQLELFDLPYNQSPSLHIILCWLLWRHFRQHLAERWRKVCGGWFLLIAISTLTTWQHHFIDVITGLAVGMLIDWMVPVDRRWNYQKPDQRRIKIALPYVVGAGSCIVLMELMMMIQLWWSVWLCWPVLSLLIIGRGYGGLGAITTGKDSQGKLPPAVYWLTLPCRIGMWLSMRWFCRRLEPVSKMTAGVYLGAFPRHIPAQNAVLDVTFEFPRGRATKDRLYFCVPMLDLVVPEEGELRQAVAMLETLREEQGSVLVHCALGLSRSALVVAAWLLCYGHCKTVNEAISYIRARRPQIVLTDEHKAMLRLWENR", - "protein_translation_length": 430, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1405" - ], - [ - "gene_synonym", - "NP_415930.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004712" - ], - [ - "gene_synonym", - "EcoGene:EG12695" - ], - [ - "gene_synonym", - "GeneID:947569" - ], - [ - "gene_synonym", - "acpD" - ], - [ - "gene_synonym", - "b1412" - ], - [ - "gene_synonym", - "GI:16129373" - ], - [ - "gene_synonym", - "JW1409" - ], - [ - "gene_synonym", - "azoR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P41407" - ] - ], - "dna_sequence": "ATGAGCAAGGTATTAGTTCTTAAATCCAGCATCCTGGCAGGGTACTCTCAGTCTAATCAGTTGTCCGATTATTTTGTTGAACAATGGCGCGAAAAGCACTCCGCTGATGAAATCACCGTTCGCGACCTGGCTGCAAATCCGATTCCGGTACTGGATGGCGAACTGGTTGGCGCTCTGCGTCCGAGCGATGCGCCGCTGACTCCGCGTCAGCAGGAAGCTCTGGCACTTTCCGATGAGTTGATTGCCGAGCTGAAAGCCCACGACGTTATCGTTATTGCGGCACCGATGTATAACTTCAACATCTCGACTCAGTTGAAAAACTATTTTGACCTGGTTGCCCGCGCAGGCGTTACTTTCCGCTATACCGAGAACGGTCCGGAAGGTCTGGTAACGGGTAAAAAAGCCATCGTTATTACCAGCCGCGGCGGGATCCACAAAGATGGACCAACGGACCTGGTGACGCCGTATCTGTCCACGTTCCTCGGCTTTATCGGCATTACCGATGTGAAATTTGTCTTCGCCGAAGGGATCGCATACGGTCCGGAAATGGCAGCGAAAGCACAGTCTGACGCAAAAGCAGCCATCGACAGCATTGTTTCTGCATAA", - "dna_sequence_length": 606, - "functions": [ - "NADH-azoreductase, FMN-dependent" - ], - "id": "CDS_1400", - "location": [ - [ - "NC_000913", - 1482860, - "-", - 606 - ] - ], - "md5": "eda35f43bccabdff2ce8610735ee7dae", - "parent_gene": "", - "protein_md5": "f5c6f93beed5caed2e31c09f11f7a653", - "protein_translation": "MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSA", - "protein_translation_length": 201, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948444" - ], - [ - "gene_synonym", - "ECK1406" - ], - [ - "gene_synonym", - "NP_415931.4" - ], - [ - "gene_synonym", - "JW5905" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P43329" - ], - [ - "gene_synonym", - "ASAP:ABE-0004718" - ], - [ - "gene_synonym", - "hrpA" - ], - [ - "gene_synonym", - "b1413" - ], - [ - "gene_synonym", - "EcoGene:EG12936" - ], - [ - "gene_synonym", - "GI:145698255" - ] - ], - "dna_sequence": "ATGACAGAACAACAAAAATTGACCTTTACGGCCTTGCAGCAGCGGCTGGATTCGCTGATGCTGCGTGACAGACTGCGTTTTTCTCGCCGTCTGCACGGCGTGAAGAAGGTTAAAAATCCTGATGCACAACAGGCCATTTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCACGACCGGAAATTACTTATCCTGACAATTTACCGGTTAGTCAGAAAAAACAGGACATTCTCGAAGCGATTCGTGATCACCAGGTGGTGATCGTCGCCGGGGAAACGGGTTCTGGTAAAACGACTCAGTTACCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGGCCATACCCAGCCGCGTCGTCTGGCGGCAAGAACAGTGGCGAACCGTATTGCGGAAGAGCTGAAAACGGAGCCGGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGCTATCGCCCGATTGTTGAAGAAGCCGATGACACCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTGAGTCAGGAAAGCCATGGCGACATTCTGATCTTTATGAGCGGCGAGCGGGAAATCCGCGATACCGCCGATGCGCTGAACAAGCTGAACTTACGCCATACCGAAATCTTGCCGCTTTATGCGCGGCTTTCGAACAGCGAACAAAATAGGGTATTCCAGTCGCACAGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACGTCGCTGACCGTACCGGGGATTAAATACGTTATCGACCCCGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAGCCGATTTCCCAGGCGTCTGCCAATCAGCGTAAAGGCCGCTGTGGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGCTCGAAGAGCTGGGCGCGATCACCACTGATGAACAGGCCAGCGCCTATAAACTGACGCCGCTCGGTCGCCAGCTCTCGCAGTTGCCTGTCGACCCACGTCTGGCGCGTATGGTGCTGGAAGCGCAAAAACATGGCTGCGTGCGTGAGGCGATGATTATCACGTCCGCGCTCTCCATTCAGGATCCGCGCGAACGTCCGATGGACAAACAGCAGGCATCGGACGAAAAACATCGTCGCTTCCACGACAAAGAGTCTGACTTTCTCGCGTTTGTGAATCTGTGGAATTATCTTGGCGAGCAGCAAAAGGCGCTTTCTTCCAACGCCTTCCGTCGCCTGTGTCGTACCGATTATCTCAACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGTCAGGTGGTGAAAGAACTTGGCATTCCGGTTAACAGCGAACCGGCGGAGTATCGCGAAATTCACATTGCGTTGCTGACCGGTTTACTTTCCCATATCGGCATGAAAGATGCCGATAAACAAGAATATACCGGCGCACGTAACGCGCGTTTCTCCATCTTCCCCGGTTCTGGTTTATTCAAAAAACCGCCTAAATGGGTAATGGTGGCGGAACTGGTAGAAACCAGCCGCCTGTGGGGGCGCATTGCTGCGCGTATCGACCCGGAATGGGTGGAGCCAGTTGCTCAGCATTTGATTAAACGCACCTACAGCGAACCGCACTGGGAACGGGCGCAGGGCGCGGTGATGGCAACGGAAAAAGTCACTGTTTATGGTTTGCCGATTGTTGCCGCGCGCAAGGTCAACTACAGCCAGATCGATCCGGCGTTATGTCGTGAACTCTTTATTCGCCACGCGCTGGTGGAAGGTGACTGGCAGACGCGTCACGCATTCTTCCGTGAAAACCTGAAACTACGGGCGGAAGTAGAAGAGCTGGAACACAAATCACGTCGCCGCGATATTCTGGTTGATGACGAAACGTTGTTTGAGTTCTACGACCAGCGCATCAGCCACGATGTAATCTCCGCTCGCCACTTCGACAGCTGGTGGAAAAAAGTCAGCCGCGAAACGCCTGATTTGCTCAACTTTGAAAAAAGCATGTTGATCAAAGAGGGCGCAGAAAAAATCAGCAAGCTGGATTACCCGAACTTCTGGCATCAGGGCAATCTCAAGCTGCGTTTGAGCTATCAGTTTGAGCCCGGCGCGGATGCTGACGGTGTGACCGTACATATTCCGCTGCCGTTACTTAACCAGGTTGAGGAAAGCGGGTTTGAATGGCAGATCCCCGGTCTGCGCCGCGAACTGGTGATTGCTCTGATTAAATCGTTGCCGAAACCGGTACGCCGTAATTTTGTACCCGCGCCAAACTATGCCGAAGCGTTTTTAGGCCGCGTCAAACCGCTGGAGTTACCGTTGCTCGACAGCCTTGAGCGCGAGTTACGGCGGATGACCGGCGTTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATTACCTTCCGCGTGGTGGATGACAAAAACAAGAAGCTAAAAGAAGGGCGCTCGCTACAAGATCTGAAAGATGCGCTGAAAGGCAAAGTGCAGGAAACGCTATCTGCGGTGGCGGATGACGGTATCGAGCAGAGCGGCTTACATATCTGGAGTTTTGGTCAGCTGCCGGAAAGCTACGAACAGAAGCGTGGCAACTACAAAGTGAAGGCGTGGCCGGCGCTGGTGGATGAGCGCGACAGTGTGGCGATCAAACTGTTTGATAACCCGCTGGAGCAAAAGCAGGCAATGTGGAACGGTCTTCGCCGTCTACTGCTGCTGAATATTCCATCGCCAATCAAATATTTACATGAAAAGTTACCGAACAAAGCCAAGCTGGGACTGTACTTTAACCCGTATGGCAAAGTGCTGGAGCTGATCGACGACTGTATCTCCTGCGGTGTGGATAAATTGATCGACGCCAATGGTGGCCCGGTCTGGACGGAAGAAGGCTTTGCTGCGCTGCATGAAAAAGTGCGTGCCGAACTGAACGACACGGTGGTGGATATTGCGAAGCAGGTCGAGCAAATCCTTACGGCAGTGTTCAATATCAACAAACGTCTGAAAGGGCGGGTGGATATGACCATGGCGCTGGGGCTTTCTGACATTAAAGCGCAGATGGGCGGGTTGGTATATCGCGGTTTTGTCACTGGTAACGGCTTCAAACGGCTGGGCGACACGCTGCGATATTTGCAGGCGATTGAAAAACGGCTGGAAAAACTGGCGGTTGATCCACATCGCGACCGTGCGCAGATGCTGAAAGTCGAAAACGTCCAGCAGGCGTGGCAGCAATGGATCAACAAACTGCCGCCCGCACGTCGTGAGGATGAAGACGTGAAAGAGATCCGTTGGATGATAGAAGAGTTGCGCGTTAGTTACTTCGCTCAACAACTTGGTACGCCTTATCCGATTTCAGATAAGCGTATTTTGCAGGCGATGGAGCAGATTAGCGGTTAA", - "dna_sequence_length": 3903, - "functions": [ - "putative ATP-dependent helicase" - ], - "id": "CDS_1401", - "location": [ - [ - "NC_000913", - 1483061, - "+", - 3903 - ] - ], - "md5": "e54dea03afa3f51baa55c7617b397d53", - "parent_gene": "", - "protein_md5": "dafe55cfcf566dcee4325859fc5a5338", - "protein_translation": "MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG", - "protein_translation_length": 1300, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1407" - ], - [ - "gene_synonym", - "GeneID:946215" - ], - [ - "gene_synonym", - "ydcF" - ], - [ - "gene_synonym", - "ASAP:ABE-0004722" - ], - [ - "gene_synonym", - "NP_415932.1" - ], - [ - "gene_synonym", - "GI:16129375" - ], - [ - "gene_synonym", - "b1414" - ], - [ - "gene_synonym", - "EcoGene:EG12110" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P34209" - ], - [ - "gene_synonym", - "JW1411" - ] - ], - "dna_sequence": "ATGAACATTACCCCGTTTCCGACGCTTTCGCCGGCAACTATAGATGCCATAAATGTTATCGGACAGTGGCTGGCGCAGGATGATTTCTCCGGTGAGGTGCCGTATCAGGCCGATTGCGTGATCCTTGCAGGCAATGCGGTTATGCCGACTATCGATGCGGCATGTAAGATTGCCCGCGATCAGCAAATTCCTTTACTGATTAGTGGTGGTATCGGTCACTCGACAACTTTTTTGTATAGCGCCATCGCACAGCATCCGCACTACAACACTATCCGCACCACTGGCAGAGCAGAAGCGACCATCCTGGCGGATATCGCTCATCAGTTCTGGCACATTCCGCATGAAAAAATCTGGATTGAAGACCAGTCAACAAACTGCGGTGAAAACGCACGCTTTAGCATCGCGCTATTGAATCAGGCCGTAGAACGAGTTCATACGGCTATCGTTGTTCAGGACCCCACCATGCAGCGGCGCACGATGGCGACGTTCCGCCGTATGACTGGGGACAATCCCGATGCACCACGCTGGTTAAGTTATCCCGGATTCGTTCCTCAGTTAGGAAATAACGCAGACAGTGTAATCTTTATTAATCAGTTACAAGGATTATGGCCAGTTGAGCGTTATCTCTCACTACTCACTGGCGAGCTGCCGCGTTTACGCGATGATAGCGATGGCTACGGTCCCCGCGGGCGAGATTTTATCGTTCACGTTGATTTTCCGGCAGAAGTCATCCATGCATGGCAAACGCTGAAACATGATGCGGTGCTCATCGAGGCGATGGAAAGTCGCTCGTTACGTTAA", - "dna_sequence_length": 801, - "functions": [ - "DUF218 superfamily protein, SAM-binding" - ], - "id": "CDS_1402", - "location": [ - [ - "NC_000913", - 1487235, - "+", - 801 - ] - ], - "md5": "668ccc963faec836899e0ab177086325", - "parent_gene": "", - "protein_md5": "be2d224193ffe564e32c8b68a89592d8", - "protein_translation": "MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAGNAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATILADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALLNQAVERVHTAIVVQDPTMQRRTMATFRRMTGDNPDAPRWLSYPGFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPRLRDDSDGYGPRGRDFIVHVDFPAEVIHAWQTLKHDAVLIEAMESRSLR", - "protein_translation_length": 266, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129376" - ], - [ - "gene_synonym", - "GeneID:945672" - ], - [ - "gene_synonym", - "ASAP:ABE-0004725" - ], - [ - "gene_synonym", - "ald" - ], - [ - "gene_synonym", - "ECK1408" - ], - [ - "gene_synonym", - "EcoGene:EG10035" - ], - [ - "gene_synonym", - "NP_415933.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25553" - ], - [ - "gene_synonym", - "b1415" - ], - [ - "gene_synonym", - "JW1412" - ], - [ - "gene_synonym", - "aldA" - ] - ], - "dna_sequence": "ATGTCAGTACCCGTTCAACATCCTATGTATATCGATGGACAGTTTGTTACCTGGCGTGGAGACGCATGGATTGATGTGGTAAACCCTGCTACAGAGGCTGTCATTTCCCGCATACCCGATGGTCAGGCCGAGGATGCCCGTAAGGCAATCGATGCAGCAGAACGTGCACAACCAGAATGGGAAGCGTTGCCTGCTATTGAACGCGCCAGTTGGTTGCGCAAAATCTCCGCCGGGATCCGCGAACGCGCCAGTGAAATCAGTGCGCTGATTGTTGAAGAAGGGGGCAAGATCCAGCAGCTGGCTGAAGTCGAAGTGGCTTTTACTGCCGACTATATCGATTACATGGCGGAGTGGGCACGGCGTTACGAGGGCGAGATTATTCAAAGCGATCGTCCAGGAGAAAATATTCTTTTGTTTAAACGTGCGCTTGGTGTGACTACCGGCATTCTGCCGTGGAACTTCCCGTTCTTCCTCATTGCCCGCAAAATGGCTCCCGCTCTTTTGACCGGTAATACCATCGTCATTAAACCTAGTGAATTTACGCCAAACAATGCGATTGCATTCGCCAAAATCGTCGATGAAATAGGCCTTCCGCGCGGCGTGTTTAACCTTGTACTGGGGCGTGGTGAAACCGTTGGGCAAGAACTGGCGGGTAACCCAAAGGTCGCAATGGTCAGTATGACAGGCAGCGTCTCTGCAGGTGAGAAGATCATGGCGACTGCGGCGAAAAACATCACCAAAGTGTGTCTGGAATTGGGGGGTAAAGCACCAGCTATCGTAATGGACGATGCCGATCTTGAACTGGCAGTCAAAGCCATCGTTGATTCACGCGTCATTAATAGTGGGCAAGTGTGTAACTGTGCAGAACGTGTTTATGTACAGAAAGGCATTTATGATCAGTTCGTCAATCGGCTGGGTGAAGCGATGCAGGCGGTTCAATTTGGTAACCCCGCTGAACGCAACGACATTGCGATGGGGCCGTTGATTAACGCCGCGGCGCTGGAAAGGGTCGAGCAAAAAGTGGCGCGCGCAGTAGAAGAAGGGGCGAGAGTGGCGTTCGGTGGCAAAGCGGTAGAGGGGAAAGGATATTATTATCCGCCGACATTGCTGCTGGATGTTCGCCAGGAAATGTCGATTATGCATGAGGAAACCTTTGGCCCGGTGCTGCCAGTTGTCGCATTTGACACGCTGGAAGATGCTATCTCAATGGCTAATGACAGTGATTACGGCCTGACCTCATCAATCTATACCCAAAATCTGAACGTCGCGATGAAAGCCATTAAAGGGCTGAAGTTTGGTGAAACTTACATCAACCGTGAAAACTTCGAAGCTATGCAAGGCTTCCACGCCGGATGGCGTAAATCCGGTATTGGCGGCGCAGATGGTAAACATGGCTTGCATGAATATCTGCAGACCCAGGTGGTTTATTTACAGTCTTAA", - "dna_sequence_length": 1440, - "functions": [ - "aldehyde dehydrogenase A, NAD-linked" - ], - "id": "CDS_1403", - "location": [ - [ - "NC_000913", - 1488232, - "+", - 1440 - ] - ], - "md5": "345c8b88ac3f6c35e84fd45c961f4de6", - "parent_gene": "", - "protein_md5": "231cde29fd90ffdeb0d36f6deea14d2e", - "protein_translation": "MSVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQS", - "protein_translation_length": 479, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4493" - ], - [ - "gene_synonym", - "GeneID:2847738" - ], - [ - "gene_synonym", - "ASAP:ABE-0285094" - ], - [ - "gene_synonym", - "gapC" - ], - [ - "gene_synonym", - "ASAP:ABE-0004729" - ], - [ - "gene_synonym", - "EcoGene:EG12103" - ], - [ - "gene_synonym", - "ASAP:ABE-0004727" - ], - [ - "gene_synonym", - "JW5906" - ], - [ - "gene_synonym", - "ECK1409" - ], - [ - "gene_synonym", - "JW1413" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33898" - ] - ], - "dna_sequence": "ATGAGTAAAGTTGGTATTAACGGTTTTGGTCGTATCGGTCGACTGGTGTTGGGTCGATTACTTGAAGTCAAAAGCAACATAGACGTTGTCGCTATTAATGATCTCACTTCCCCATAAATTCTCGCCTACCTGCTGAAACATGATTCAAACTACGGACCATTCCCCTGGAGCGTTGATTTTACGGAAGATTCACTTATCGTTGATGGGAAAAGTATCGCGGTTTACGCCGAAAAAGAGGCTAAAAATATTCCGTGGAAAGCGAAAGGTGCAGAAATCATTGTCGAATGTACTGGCTTTTATACCTCCGCCGAGAAATCGCAGGCGCATCTTGATGCTGGTGCGAAGAAGGTGTTGATTTCCGCCCCTGCCGGTGAAATGAAAACTATCGTTTATAACGTCAATGACGACACTCTGGATGGCAACGACACCATTGTTTCCGTGGCGTCATGCACCACTAACTGTCTTGCGCCGATGGCCAAAGCCTTGCATGACAGTTTCGGGATAGAAGTCGGCACGATGACGACCATTCATGCCTATACTGGCACCCAGTCACTGGTGGATGGCCCGCGTGGTAAAGATTTACGTGCTTCACGCGCAGCGGCAGAAAATATCATTCCCCACACTACGGGGGCGGCAAAAGCCATTGGTCTGGTGATCCCGGAACTGAGCGGCAAACTGAAAGGTCATGCGCAACGCGTGCCGGTGAAAACAGGTTCGGTCACTGAACTGGTATCGATTCTCGGAAAAAAGGTGACTGCCGAAGAGGTGAATAACGCACTTAAACAAGCAACCACCAATAACGAGTCATTTGGTTATACCGATGAAGAAATAGTCTCTTCCGATATCATTGGCAGCCATTTCGGTTCGGTGTTTGATGCCACGCAAACGGAAATTACCGCCGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACACAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGA", - "dna_sequence_length": 1002, - "id": "CDS_1404", - "location": [ - [ - "NC_000913", - 1490713, - "-", - 750 - ], - [ - "NC_000913", - 1489964, - "-", - 252 - ] - ], - "md5": "2e0becaca5ef901ca9063710c131e845", - "parent_gene": "", - "protein_md5": "933664ba163cff529826cabe41fd20ed", - "protein_translation": "MSKVGINGFGRIGRLVLGRLLEVKSNIDVVAINDLTSP", - "protein_translation_length": 38, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABE5" - ], - [ - "gene_synonym", - "ECK1410" - ], - [ - "gene_synonym", - "ASAP:ABE-0004733" - ], - [ - "gene_synonym", - "GeneID:947241" - ], - [ - "gene_synonym", - "cybB" - ], - [ - "gene_synonym", - "NP_415935.2" - ], - [ - "gene_synonym", - "EcoGene:EG10172" - ], - [ - "gene_synonym", - "b1418" - ], - [ - "gene_synonym", - "JW5224" - ], - [ - "gene_synonym", - "GI:90111268" - ] - ], - "dna_sequence": "ATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTCTTTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCACGTAGCGATCGGCCACTCATCAACATGATTCATGTTTCCTGTGGCATCTCAATTCTCGTGCTGATGGTCGTTCGTCTTTTGTTAAGGCTGAAATACCCAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGTTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGTCGTGGCATGAAACGCTGGCGAATCTGGGATATTTTGTCATCGGGTTGCACGCTGCGGCTGCACTGGCACACCACTATTTCTGGAAGGACAACACACTTCTACGCATGATGCCGCGTAAACGTTCCTGA", - "dna_sequence_length": 531, - "functions": [ - "cytochrome b561" - ], - "id": "CDS_1405", - "location": [ - [ - "NC_000913", - 1490902, - "+", - 531 - ] - ], - "md5": "40a90c72dd82cab7e38f344230bc522a", - "parent_gene": "", - "protein_md5": "076eb144eb4ed579bce42ec9beee5823", - "protein_translation": "MENKYSRLQISIHWLVFLLVIAAYCAMEFRGFFPRSDRPLINMIHVSCGISILVLMVVRLLLRLKYPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGLVMMYNRGNPWFAFGLTMPYASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHYFWKDNTLLRMMPRKRS", - "protein_translation_length": 176, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1411" - ], - [ - "gene_synonym", - "GeneID:945986" - ], - [ - "gene_synonym", - "ASAP:ABE-0004736" - ], - [ - "gene_synonym", - "ydcA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACW4" - ], - [ - "gene_synonym", - "NP_415936.1" - ], - [ - "gene_synonym", - "EcoGene:EG11219" - ], - [ - "gene_synonym", - "GI:16129378" - ], - [ - "gene_synonym", - "b1419" - ], - [ - "gene_synonym", - "JW1416" - ] - ], - "dna_sequence": "ATGAAAAAACTGGCACTTATTTTGTTTATGGGAACGCTTGTTTCCTTTTATGCCGATGCCGGGCGCAAACCCTGTTCTGGTTCGAAAGGGGGGATCTCACACTGTACGGCAGGCGGCAAATTTGTCTGTAATGATGGTTCTATTAGTGCATCGAAAAAAACATGCACTAACTGA", - "dna_sequence_length": 174, - "functions": [ - "putative periplasmic protein" - ], - "id": "CDS_1406", - "location": [ - [ - "NC_000913", - 1491677, - "+", - 174 - ] - ], - "md5": "e93932aaf27c87b6e9f5f9f0e556743e", - "parent_gene": "", - "protein_md5": "c644a0db127a3ef79f5e313345406a27", - "protein_translation": "MKKLALILFMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCNDGSISASKKTCTN", - "protein_translation_length": 57, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4428" - ], - [ - "gene_synonym", - "ECK1412" - ], - [ - "gene_synonym", - "hokB" - ], - [ - "gene_synonym", - "ydcB" - ], - [ - "gene_synonym", - "YP_025301.1" - ], - [ - "gene_synonym", - "GeneID:2847727" - ], - [ - "gene_synonym", - "ASAP:ABE-0047283" - ], - [ - "gene_synonym", - "EcoGene:EG11240" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77494" - ], - [ - "gene_synonym", - "GI:49176107" - ], - [ - "gene_synonym", - "JW5225" - ] - ], - "dna_sequence": "ATGAAGCACAACCCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTGACATTCACACTCCTGACCCGACAAACGCTCTACGAACTGCGGTTCCGGGACGGTGATAAGGAGGTTGCTGCGCTCATGGCCTGCACGTCCAGGTAA", - "dna_sequence_length": 150, - "functions": [ - "toxic polypeptide, small" - ], - "id": "CDS_1407", - "location": [ - [ - "NC_000913", - 1492071, - "-", - 150 - ] - ], - "md5": "be9842f8b62b1cff75b4ebeba967e155", - "parent_gene": "", - "protein_md5": "702375b166e5701885362211213db51b", - "protein_translation": "MKHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDKEVAALMACTSR", - "protein_translation_length": 49, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76096" - ], - [ - "gene_synonym", - "ASAP:ABE-0004738" - ], - [ - "gene_synonym", - "ECK1413" - ], - [ - "gene_synonym", - "NP_415937.1" - ], - [ - "gene_synonym", - "GeneID:948820" - ], - [ - "gene_synonym", - "EcoGene:EG20260" - ], - [ - "gene_synonym", - "b1420" - ], - [ - "gene_synonym", - "GI:16129379" - ], - [ - "gene_synonym", - "JW5882" - ], - [ - "gene_synonym", - "mokB" - ] - ], - "dna_sequence": "ATGAACCTAGCAATTCAGATCTTAGCCTCTTACCCGCCATCCGGCAAGGAGAAAGGCTATGAAGCACAACCCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTGACATTCACACTCCTGACCCGACAAACGCTCTACGAACTGCGGTTCCGGGACGGTGA", - "dna_sequence_length": 168, - "functions": [ - "regulatory peptide" - ], - "id": "CDS_1408", - "location": [ - [ - "NC_000913", - 1492129, - "-", - 168 - ] - ], - "md5": "aae1a7887738d0beb248d4630857d0bc", - "parent_gene": "", - "protein_md5": "5ac97ccb86020d5924b889fd3a525485", - "protein_translation": "MNLAIQILASYPPSGKEKGYEAQPSGGVSAHYLHYDSDIHTPDPTNALRTAVPGR", - "protein_translation_length": 55, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1415" - ], - [ - "gene_synonym", - "GeneID:945995" - ], - [ - "gene_synonym", - "trg" - ], - [ - "gene_synonym", - "b1421" - ], - [ - "gene_synonym", - "EcoGene:EG11018" - ], - [ - "gene_synonym", - "GI:16129380" - ], - [ - "gene_synonym", - "NP_415938.1" - ], - [ - "gene_synonym", - "JW1417" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05704" - ], 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"ATGAATACAACTCCCTCACAGCGATTAGGTTTTTTGCATCACATCAGGTTGGTTCCGTTATTTGCCTGCATTCTAGGCGGTATCTTAGTTCTATTCGCATTAAGTTCAGCCCTGGCTGGCTATTTCCTCTGGCAGGCCGATCGCGATCAGCGTGATGTTACTGCGGAGATTGAGATTCGGACCGGGTTAGCGAACAGTTCAGATTTTTTGCGTTCAGCCCGGATCAATATGATTCAGGCCGGGGCTGCGAGTCGTATTGCGGAAATGGAAGCAATGAAGCGAAATATTGCGCAAGCCGAATCGGAGATTAAACAGTCGCAGCAAGGTTATCGTGCTTATCAGAATCGACCGGTGAAAACACCTGCTGATGAAGCCCTCGACACTGAATTAAATCAACGCTTTCAGGCTTATATCACGGGTATGCAACCTATGTTGAAATATGCCAAAAATGGCATGTTTGAAGCGATTATCAATCATGAAAGTGAGCAGATCCGACCGCTGGATAATGCTTATACCGATATTTTGAACAAAGCCGTTAAGATACGTAGCACCAGAGCCAACCAACTGGCGGAACTGGCCCATCAGCGCACCCGCCTGGGTGGGATGTTCATGATTGGCGCGTTTGTGCTTGCCCTGGTCATGACGCTGATAACATTTATGGTGCTACGTCGGATCGTCATTCGTCCACTGCAACATGCCGCACAACGGATTGAAAAAATCGCCAGTGGCGATCTGACGATGAATGATGAACCGGCGGGTCGTAATGAAATCGGTCGCTTAAGTCGTCATTTACAGCAAATGCAGCATTCACTGGGGATGACAGTAGGGACTGTTCGACAGGGCGCGGAAGAGATTTATCGTGGCACCAGCGAAATTTCAGCTGGCAATGCGGACCTGTCATCTCGCACCGAAGAACAAGCGGCGGCTATCGAACAAACTGCCGCCAGCATGGAGCAACTCACTGCGACGGTGAAACAGAATGCGGATAACGCGCATCATGCCAGCAAACTGGCGCAAGAGGCTTCTATTAAAGCCAGCGATGGCGGGCAGACGGTTTCCGGTGTAGTAAAAACGATGGGCGCTATCTCCACGAGTTCGAAGAAAATTTCTGAGATCACCGCCGTCATCAACAGTATTGCTTTCCAGACGAATATTCTGGCACTGAATGCTGCCGTTGAAGCCGCGCGAGCGGGTGAGCAAGGGCGTGGATTTGCCGTTGTCGCCAGCGAAGTACGGACACTCGCAAGTCGCAGCGCTCAGGCGGCGAAAGAGATTGAAGGCTTGATCAGTGAATCAGTCAGGTTAATTGACCTGGGGTCGGATGAGGTGGCAACGGCCGGGAAAACCATGAGCACTATTGTTGATGCCGTCGCGAGTGTCACACATATCATGCAGGAAATCGCCGCCGCCTCGGATGAACAAAGTAGAGGCATAACGCAGGTTAGCCAGGCGATTTCTGAAATGGATAAGGTGACGCAACAGAATGCTTCTCTGGTAGAAGAGGCCTCAGCGGCGGCGGTGTCCCTTGAAGAACAGGCGGCACGATTAACTGAGGCGGTGGATGTATTCCGTCTGCACAAACATTCTGTGTCGGCAGAACCTCGCGGAGCGGGTGAACCAGTTAGTTTCGCTACGGTGTGA", 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"gene_synonym", - "ECK1416" - ], - [ - "gene_synonym", - "ydcI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77171" - ], - [ - "gene_synonym", - "GeneID:948865" - ], - [ - "gene_synonym", - "ASAP:ABE-0004746" - ], - [ - "gene_synonym", - "EcoGene:EG13752" - ], - [ - "gene_synonym", - "b1422" - ], - [ - "gene_synonym", - "JW5226" - ], - [ - "gene_synonym", - "NP_415939.2" - ], - [ - "gene_synonym", - "GI:90111269" - ] - ], - "dna_sequence": "ATGGAAAAAAATAGTCTGTTTAGTCAGCGCATCCGTTTGCGCCACCTTCATACATTCGTAGCTGTCGCACAACAAGGAACTTTGGGGCGCGCGGCTGAAACCCTTAATTTGAGTCAACCTGCGCTCTCTAAGACATTGAATGAACTGGAGCAGCTGACTGGCGCTCGCTTGTTTGAGCGTGGTCGTCAGGGGGCGCAACTTACCTTACCCGGCGAACAATTTTTAACGCATGCAGTCAGAGTTCTTGACGCCATCAACACTGCCGGACGGTCGCTTCATCGTAAAGAAGGTCTTAATAATGATGTCGTCAGGGTTGGTGCACTACCTACTGCGGCACTGGGGATATTACCTTCGGTTATAGGTCAGTTTCATCAGCAACAAAAAGAGACGACCTTGCAAGTTGCGACAATGAGTAACCCTATGATTCTGGCGGGTTTAAAAACCGGGGAAATCGATATCGGCATTGGTCGGATGTCAGATCCTGAACTGATGACCGGGCTTAATTACGAACTGCTGTTTCTTGAATCGTTGAAGCTGGTTGTCCGCCCTAATCACCCGCTACTTCAGGAGAACGTAACGCTAAGCCGGGTGCTGGAATGGCCGGTCGTTGTATCACCAGAAGGCACTGCGCCACGCCAGCATTCAGATGCATTAGTGCAGAGCCAGGGCTGTAAAATTCCTTCGGGTTGTATCGAAACGCTGTCTGCTTCGCTATCTCGTCAACTTACGGTTGAATACGATTACGTGTGGTTTGTCCCTTCTGGCGCTGTAAAAGACGACCTGCGTCATGCCACGCTGGTGGCCCTGCCTGTTCCGGGACATGGTGCAGGCGAACCGATTGGAATACTGACCCGCGTAGATGCGACGTTCTCTTCTGGTTGCCAGTTGATGATTAACGCTATTCGAAAATCAATGCCGTTCTGA", - "dna_sequence_length": 924, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_1410", - "location": [ - [ - "NC_000913", - 1495071, - "-", - 924 - ] - ], - "md5": "4a03fcc066986d1aba3081172cb07778", - "parent_gene": "", - "protein_md5": "fc2a7101356ddd3241030d783952b9ba", - "protein_translation": "MEKNSLFSQRIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSKTLNELEQLTGARLFERGRQGAQLTLPGEQFLTHAVRVLDAINTAGRSLHRKEGLNNDVVRVGALPTAALGILPSVIGQFHQQQKETTLQVATMSNPMILAGLKTGEIDIGIGRMSDPELMTGLNYELLFLESLKLVVRPNHPLLQENVTLSRVLEWPVVVSPEGTAPRQHSDALVQSQGCKIPSGCIETLSASLSRQLTVEYDYVWFVPSGAVKDDLRHATLVALPVPGHGAGEPIGILTRVDATFSSGCQLMINAIRKSMPF", - "protein_translation_length": 307, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76097" - ], - [ - "gene_synonym", - "ECK1417" - ], - [ - "gene_synonym", - "ydcJ" - ], - [ - "gene_synonym", - "GeneID:945991" - ], - [ - "gene_synonym", - "EcoGene:EG13753" - ], - [ - "gene_synonym", - "JW1419" - ], - [ - "gene_synonym", - "b1423" - ], - [ - "gene_synonym", - "ASAP:ABE-0004750" - ], 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"ATGGCGAACAGCATCACGGCGGATGAGATTCGGGAACAGTTTTCGCAGGCAATGTCAGCCATGTACCAGCAAGAAGTTCCGCAATATGGCACGCTGCTGGAACTGGTAGCTGATGTGAATCTGGCTGTGCTGGAAAACAATCCTCAACTGCACGAAAAAATGGTAAATGCAGACGAGCTGGCGCGACTGAATGTTGAACGTCATGGGGCGATTCGCGTTGGGACTGCACAAGAGCTTGCTACTCTTCGGCGGATGTTTGCCATTATGGGGATGTACCCGGTGAGCTATTACGATCTCTCGCAGGCAGGGGTGCCGGTACATTCGACAGCATTTCGGCCCATTGATGATGCTTCTCTGGCGCGTAATCCCTTCCGCGTTTTTACCTCCTTACTCCGCCTTGAGCTTATCGAGAACGAAATTTTGCGCCAGAAAGCGGCGGAGATTCTGCGTCAGCGCGATATCTTCACCCCACGTTGTCGACAACTGTTAGAGGAATATGAGCAGCAGGGCGGTTTTAACGAAACACAGGCACAGGAGTTTGTGCAGGAAGCCCTGGAAACGTTTCGCTGGCACCAGTCAGCAACGGTAGATGAAGAAACCTATCGCGCATTGCACAACGAACATCGGTTGATTGCTGATGTGGTCTGTTTTCCTGGATGCCATATCAACCACCTGACGCCACGTACGCTGGATATTGACCGGGTGCAGTCGATGATGCCTGAATGCGGAATTGAACCCAAAATTCTCATCGAGGGGCCGCCGCGCCGCGAGGTACCGATTTTACTACGCCAGACCAGCTTTAAAGCACTGGAAGAGACGGTGTTGTTTGCGGGGCAGAAACAGGGCACGCATACCGCGCGCTTTGGTGAAATTGAGCAGCGTGGCGTGGCATTAACGCCGAAAGGGCGACAACTGTATGATGATCTTCTGCGTAACGCTGGAACCGGGCAGGATAATCTCACTCACCAAATGCATTTACAGGAAACCTTCCGCACTTTTCCTGACAGTGAGTTTTTAATGCGTCAGCAAGGGTTGGCATGGTTCCGGTACCGTCTGACGCCTTCGGGTGAGGCGCATCGTCAGGCGATTCATCCTGGAGACGATCCACAGCCCTTAATTGAACGTGGTTGGGTAGTGGCGCAACCCATCACCTATGAAGATTTCTTGCCCGTTAGCGCGGCGGGGATCTTCCAGTCAAATCTGGGTAATGAAACGCAGACACGCAGTCACGGTAATGCCAGTCGCGAAGCATTTGAGCAGGCGTTGGGTTGTCCGGTTTTGGATGAGTTCCAGCTTTACCAGGAAGCGGAAGAACGCAGTAAACGTCGCTGTGGTTTGCTTTAA", - "dna_sequence_length": 1344, - "functions": [ - "putative metalloenzyme" - ], - "id": "CDS_1411", - "location": [ - [ - "NC_000913", - 1495288, - "+", - 1344 - ] - ], - "md5": "f05768373ff1b3c8a8105d1c5171951c", - "parent_gene": "", - "protein_md5": "b2395aaf32657e4614543858edf0ce19", - "protein_translation": "MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQAGVPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCRQLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQSMMPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLFAGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFPDSEFLMRQQGLAWFRYRLTPSGEAHRQAIHPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSNLGNETQTRSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL", - "protein_translation_length": 447, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12859" - ], - [ - "gene_synonym", - "yzzZ" - ], - [ - "gene_synonym", - "ydcG" - ], - [ - "gene_synonym", - "ECK1418" - ], - [ - "gene_synonym", - "b1424" - ], - [ - "gene_synonym", - "opgD" - ], - [ - "gene_synonym", - "mdoD" - ], - [ - "gene_synonym", - "GeneID:945994" - ], - [ - "gene_synonym", - "JW1420" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P40120" - ], - [ - "gene_synonym", - "ASAP:ABE-0004754" - ], - [ - "gene_synonym", - "GI:145698256" - ], - [ - "gene_synonym", - "NP_415941.5" - ] - ], - "dna_sequence": "ATGGATCGTAGACGATTTATTAAAGGTTCAATGGCTATGGCCGCCGTGTGCGGTACCAGCGGCATTGCTTCTCTTTTTTCTCAGGCGGCATTCGCGGCAGATTCTGATATTGCCGACGGGCAAACCCAGCGTTTTGACTTCTCCATTCTACAGTCAATGGCGCACGACTTAGCGCAAACAGCGTGGCGTGGTGCGCCTCGTCCGTTACCTGACACGCTGGCGACAATGACGCCGCAGGCTTATAACAGTATTCAATACGACGCCGAAAAATCGCTCTGGCATAACGTTGAGAACCGTCAACTGGACGCTCAGTTCTTCCATATGGGAATGGGATTCCGTCGCCGCGTTCGTATGTTTTCTGTAGATCCAGCAACACATCTGGCGCGTGAAATTCACTTTCGCCCGGAGTTGTTCAAATACAACGATGCAGGTGTTGATACAAAACAATTAGAAGGGCAAAGCGATCTCGGCTTTGCCGGTTTTCGCGTGTTTAAAGCCCCCGAACTGGCGCGCCGTGATGTAGTATCATTTCTCGGCGCGAGTTATTTCCGCGCCGTTGATGATACATATCAATACGGTTTGTCGGCCCGCGGCCTGGCGATCGACACTTACACCGACAGTAAAGAAGAGTTCCCCGACTTTACCGCCTTCTGGTTTGATACGGTAAAACCGGGGGCAACTACCTTTACCGTTTATGCGTTGCTCGATAGCGCCAGCATTACTGGTGCCTATAAGTTCACTATCCATTGTGAGAAAAGTCAGGTGATTATGGATGTGGAAAATCACCTGTATGCGCGCAAAGACATTAAACAGCTGGGCATTGCGCCGATGACCAGTATGTTCAGCTGCGGTACTAATGAACGTCGGATGTGCGATACAATTCATCCGCAAATTCATGACTCTGATCGTCTGTCCATGTGGCGGGGCAACGGCGAGTGGATTTGCCGTCCGCTGAATAATCCGCAAAAATTGCAGTTCAATGCTTACACCGACAACAACCCGAAAGGGTTTGGTTTATTGCAACTGGATCGTGACTTCTCCCATTATCAGGACATTATGGGCTGGTATAACAAACGCCCAAGTCTGTGGGTGGAACCGCGTAACAAGTGGGGTAAGGGCACCATCGGCCTGATGGAAATCCCAACAACGGGCGAAACGCTGGATAACATTGTCTGCTTCTGGCAGCCAGAAAAAGCTGTAAAAGCAGGTGATGAGTTTGCATTCCAGTATCGTCTGTACTGGAGTGCGCAACCGCCTGTTCATTGCCCATTAGCGCGCGTTATGGCGACGCGTACCGGCATGGGCGGTTTCTCGGAAGGTTGGGCGCCAGGTGAACACTATCCCGAAAAATGGGCGCGTCGTTTTGCCGTCGATTTCGTTGGTGGTGATCTGAAAGCTGCCGCGCCAAAAGGCATTGAGCCGGTGATTACGCTTTCCAGTGGGGAAGCGAAGCAAATCGAAATTCTCTATATTGAACCCATCGATGGTTATCGTATTCAGTTTGACTGGTATCCGACTTCGGACTCCACTGATCCGGTCGATATGCGGATGTATCTACGTTGTCAGGGGGACGCTATCAGTGAAACATGGCTGTATCAGTATTTCCCGCCAGCGCCGGATAAACGTCAGTATGTTGACGACCGCGTGATGAGTTAA", 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"ASAP:ABE-0004761" - ], - [ - "gene_synonym", - "ydcH" - ], - [ - "gene_synonym", - "EcoGene:EG12865" - ], - [ - "gene_synonym", - "GeneID:945997" - ], - [ - "gene_synonym", - "NP_415943.4" - ], - [ - "gene_synonym", - "ECK1419" - ], - [ - "gene_synonym", - "b1426" - ], - [ - "gene_synonym", - "GI:90111271" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACW6" - ], - [ - "gene_synonym", - "JW5823" - ] - ], - "dna_sequence": "ATGTTTCCAGAATACCGAGATTTAATATCCCGTCTGAAAAACGAAAATCCTCGCTTTATGTCCTTGTTCGATAAACACAATAAACTTGATCATGAAATTGCCAGAAAGGAAGGTTCCGACGGTCGAGGGTACAATGCGGAAGTGGTCCGCATGAAAAAACAAAAGCTACAGTTAAAAGATGAGATGCTCAAAATCCTGCAGCAGGAGAGCGTCAAAGAGGTGTAA", - "dna_sequence_length": 225, - "functions": [ - "DUF465 family protein" - ], - "id": "CDS_1413", - "location": [ - [ - "NC_000913", - 1498651, - "+", - 225 - ] - ], - "md5": "6d990d4fdc28065e7928651bc379c368", - "parent_gene": "", - "protein_md5": "6bf54baee61b13e781585b52912ea80c", - "protein_translation": "MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGSDGRGYNAEVVRMKKQKLQLKDEMLKILQQESVKEV", - "protein_translation_length": 74, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1420" - ], - [ - "gene_synonym", - "ASAP:ABE-0004763" - ], - [ - "gene_synonym", - "GeneID:945998" - ], - [ - "gene_synonym", - "JW1423" - ], - [ - "gene_synonym", - "EcoGene:EG10853" - ], - [ - "gene_synonym", - "b1427" - ], - [ - "gene_synonym", - "NP_415944.1" - ], - [ - "gene_synonym", - "rimL" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P13857" - ], - [ - "gene_synonym", - "GI:16129386" - ] - ], - "dna_sequence": "ATGACTGAAACGATAAAAGTAAGCGAATCACTTGAATTACATGCTGTTGCAGAAAATCACGTCAAACCTCTTTATCAGTTAATCTGTAAAAATAAAACCTGGTTACAGCAGTCGCTAAACTGGCCGCAGTTTGTTCAAAGTGAAGAGGACACGCGAAAAACGGTGCAGGGTAATGTGATGTTGCATCAACGCGGCTATGCCAAAATGTTCATGATTTTCAAAGAAGATGAACTTATCGGCGTTATCTCGTTTAATCGTATTGAACCACTGAATAAAACCGCTGAAATAGGCTACTGGCTGGACGAATCTCATCAGGGGCAGGGGATCATTTCTCAGGCGCTGCAGGCATTGATTCATCATTACGCCCAGTCTGGTGAACTTAGACGCTTCGTGATCAAATGTCGGGTGGACAATCCGCAAAGCAACCAGGTCGCTTTGCGCAATGGTTTTATCCTTGAAGGTTGCCTGAAACAGGCTGAGTTCCTGAATGATGCCTATGATGATGTGAACTTATACGCGCGTATTATCGATTCACAATAA", - "dna_sequence_length": 540, - "functions": [ - "ribosomal-protein-L7/L12-serine acetyltransferase" - ], - "id": "CDS_1414", - "location": [ - [ - "NC_000913", - 1498938, - "+", - 540 - ] - ], - "md5": "57bca4130624c2e507d7c70f2662ac22", - "parent_gene": "", - "protein_md5": "6408eb76cbb8f864c5a094fcad6fd378", - "protein_translation": "MTETIKVSESLELHAVAENHVKPLYQLICKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTAEIGYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAEFLNDAYDDVNLYARIIDSQ", - "protein_translation_length": 179, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1421" - ], - [ - "gene_synonym", - "GeneID:944932" - ], - [ - "gene_synonym", - "ASAP:ABE-0004765" - ], - [ - "gene_synonym", - "ydcK" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76100" - ], - [ - "gene_synonym", - "b1428" - ], - [ - "gene_synonym", - "JW1424" - ], - [ - "gene_synonym", - "EcoGene:EG13754" - ], - [ - "gene_synonym", - "GI:16129387" - ], - [ - "gene_synonym", - "NP_415945.1" - ] - ], - "dna_sequence": "ATGCGCAAATATCGTCTAAGTGAAGAACAGCGAGCCTTTAGTTATCAGGAAGATGGCACTAAAAAAAATGTGTTATTACGGCAGATTATCGCCATTAGCGATTTTAACGATGTGATAGCAGGAACCGCTGGCGGCTGGATCGATCGCGAAACGGTGTTAGCACAAGAAGGAAATTGCTGGATTTACGACCAGAATGCTATTGCGTTCGGCGGAGCGGTGATTTCCGGTAATACGCGTATCACCGGCACCAGCGTGCTGTGGGGAGAGGTTTACGCAACGGATAACGTCTGGATCGATAATAGTGAAATCAGCCAGGGTGCATATATAAGTGACAGCGTCACCATTCATGACTCATTAGTTTACGGGCAATGTAGAATATTTGGTCACGCCTTAATTGATCAACATTCTATGATCGTCGCCGCACAAGGCTTAACGCCCGACCATCAACTCCTGCTCCAAATTTATGATCGCGCAAGGGTTAGCGCCTCGCGTATTGTCCACCAGGCACAAATTTATGGCGATGCCGTCGTCCGGTATGCTTTTATTGAACATCGCGCCGAAGTTTTTGATTTTGCCAGTATTGAAGGTAATGAAGAGAACAATGTCTGGCTATGCGATTGCGCTAAAGTCTACGGTCACGCGCAGGTGAAAGCTGGCATAGAAGAAGATGCCATTCCGACGATTCATTACAGTTCGCAGGTGGCGGAATATGCCATTGTGGAAGGTAATTGTGTGTTAAAACATCATGTCTTGGTTGGCGGAAATGCCGTGGTACGTGGCGGACCGATTCTGCTCGACGAGCACGTTGTCATACAAGGTGAGAGCCGTATTACAGGTGCGGTGATAATTGAAAACCATGTGGAGTTAACCGACCACGCCGTCGTTGAAGCCTTTGATGGCGACACGGTTCATGTCCGTGGTCCAAAAGTCATTAACGGCGAGGAGCGCATTACGCGAACGCCGCTGGCAGGGTTATTGTGA", - "dna_sequence_length": 981, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1415", - "location": [ - [ - "NC_000913", - 1500449, - "-", - 981 - ] - ], - "md5": "d6a2d0eb411c2499e5969e59dfdb7b29", - "parent_gene": "", - "protein_md5": "e2acdcc9d367a2e54897181b035e4d85", - "protein_translation": "MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCWIYDQNAIAFGGAVISGNTRITGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLVYGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARVSASRIVHQAQIYGDAVVRYAFIEHRAEVFDFASIEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIVEGNCVLKHHVLVGGNAVVRGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRTPLAGLL", - "protein_translation_length": 326, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415946.1" - ], - [ - "gene_synonym", - "ECK1422" - ], - [ - "gene_synonym", - "GeneID:945852" - ], - [ - "gene_synonym", - "tehA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25396" - ], - [ - "gene_synonym", - "EcoGene:EG11883" - ], - [ - "gene_synonym", - "GI:16129388" - ], - [ - "gene_synonym", - "JW1425" - ], - [ - "gene_synonym", - "ASAP:ABE-0004770" - ], - [ - "gene_synonym", - "b1429" - ] - ], - "dna_sequence": "ATGCAGAGCGATAAAGTGCTCAATTTGCCGGCAGGCTACTTTGGTATTGTGTTGGGGACGATAGGGATGGGATTTGCCTGGCGCTATGCCAGCCAGGTTTGGCAGGTCAGCCACTGGTTAGGGGATGGGCTGGTGATTCTGGCGATGATCATCTGGGGATTATTGACTAGCGCATTTATTGCCCGACTCATACGCTTTCCGCATAGCGTGCTGGCGGAAGTTCGCCATCCAGTGCTGAGCAGTTTTGTGAGTTTGTTTCCGGCAACGACGATGCTGGTGGCGATTGGTTTTGTTCCGTGGTTTCGCCCACTGGCGGTGTGCCTGTTCAGTTTTGGTGTCGTGGTTCAGTTGGCTTATGCCGCCTGGCAAACTGCGGGATTATGGCGCGGATCTCACCCTGAAGAAGCTACCACGCCTGGACTGTATCTGCCGACAGTTGCCAACAACTTTATCAGCGCAATGGCCTGTGGTGCGTTGGGCTACACCGACGCCGGTCTGGTGTTTTTAGGCGCAGGCGTTTTCTCATGGCTAAGCCTTGAACCGGTGATCTTGCAGCGTCTGCGCAGTTCGGGAGAATTACCCACGGCACTGCGGACATCACTCGGCATTCAGCTCGCTCCTGCGCTGGTGGCTTGTAGTGCCTGGCTGAGCGTCAACGGCGGCGAGGGTGACACGCTGGCGAAAATGCTTTTCGGTTATGGACTGCTGCAACTGCTGTTTATGCTACGTCTGATGCCATGGTATCTCTCCCAGCCATTTAATGCTTCATTCTGGAGTTTCTCGTTCGGCGTATCTGCACTGGCAACCACCGGTTTGCATCTGGGGAGTGGCAGCGATAATGGATTTTTCCATACGCTGGCGGTGCCGCTGTTTATCTTTACCAATTTTATTATTGCAATACTGCTCATCCGTACTTTTGCGCTTCTGATGCAGGGAAAATTGTTAGTCAGAACCGAGCGCGCCGTTTTAATGAAAGCAGAGGACAAAGAATGA", - "dna_sequence_length": 993, - "functions": [ - "potassium-tellurite ethidium and proflavin transporter" - ], - "id": "CDS_1416", - "location": [ - [ - "NC_000913", - 1500573, - "+", - 993 - ] - ], - "md5": "96528d65d61591d7d247c927c92cab58", - "parent_gene": "", - "protein_md5": "a2a361f02254dc9d096f1496531850ba", - "protein_translation": "MQSDKVLNLPAGYFGIVLGTIGMGFAWRYASQVWQVSHWLGDGLVILAMIIWGLLTSAFIARLIRFPHSVLAEVRHPVLSSFVSLFPATTMLVAIGFVPWFRPLAVCLFSFGVVVQLAYAAWQTAGLWRGSHPEEATTPGLYLPTVANNFISAMACGALGYTDAGLVFLGAGVFSWLSLEPVILQRLRSSGELPTALRTSLGIQLAPALVACSAWLSVNGGEGDTLAKMLFGYGLLQLLFMLRLMPWYLSQPFNASFWSFSFGVSALATTGLHLGSGSDNGFFHTLAVPLFIFTNFIIAILLIRTFALLMQGKLLVRTERAVLMKAEDKE", - "protein_translation_length": 330, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1423" - ], - [ - "gene_synonym", - "NP_415947.1" - ], - [ - "gene_synonym", - "GeneID:945979" - ], - [ - "gene_synonym", - "tehB" - ], - [ - "gene_synonym", - "GI:16129389" - ], - [ - "gene_synonym", - "JW1426" - ], - [ - "gene_synonym", - "b1430" - ], - [ - "gene_synonym", - "EcoGene:EG11884" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25397" - ], - [ - "gene_synonym", - "ASAP:ABE-0004772" - ] - ], - "dna_sequence": "ATGATCATTCGTGACGAAAACTATTTTACTGATAAATATGAATTAACCCGCACACACTCTGAAGTACTGGAAGCGGTGAAAGTGGTTAAACCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGAGGCTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGCGTTTCGCCACGATGCTGGCACGTAAAAAATGA", - "dna_sequence_length": 594, - "functions": [ - "tellurite, selenium methyltransferase, SAM-dependent", - "tellurite, selenium resistance protein" - ], - "id": "CDS_1417", - "location": [ - [ - "NC_000913", - 1501562, - "+", - 594 - ] - ], - "md5": "18c3302bee2a08d5bd72f4583d2b171b", - "parent_gene": "", - "protein_md5": "2d6523ddf0ad0be0f0ebd2425a2ed785", - "protein_translation": "MIIRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEGWERVKYNEDVGELHRTDANGNRIKLRFATMLARKK", - "protein_translation_length": 197, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ydcL" - ], - [ - "gene_synonym", - "ECK1424" - ], - [ - "gene_synonym", - "NP_415948.1" - ], - [ - "gene_synonym", - "GeneID:948203" - ], - [ - "gene_synonym", - "b1431" - ], - [ - "gene_synonym", - "JW1427" - ], - [ - "gene_synonym", - "EcoGene:EG13755" - ], - [ - "gene_synonym", - "ASAP:ABE-0004775" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64451" - ], - [ - "gene_synonym", - "GI:16129390" - ] - ], - "dna_sequence": "ATGCGTACCACATCATTTGCGAAAGTTGCAGCTTTATGCGGCTTATTGGCTCTGTCTGGTTGTGCATCTAAAATCACCCAGCCAGATAAATATTCTGGTTTTTTAAACAATTACTCTGATTTAAAAGAAACAACCTCGGCTACAGGTAAACCTGTTTTACGTTGGGTAGACCCGAGTTTTGATCAAAGCAAATATGACAGCATCGTCTGGAACCCAATCACTTATTATCCGGTACCGAAACCGTCGACCCAGGTAGGGCAGAAAGTTCTGGATAAAATTTTGAACTATACCAACACCGAAATGAAAGAAGCGATAGCGCAGCGTAAACCACTGGTTACCACCGCTGGGCCGCGTAGTCTGATTTTCCGTGGGGCCATTACCGGTGTAGATACCAGCAAAGAAGGGCTGCAATTCTATGAAGTGGTTCCTGTTGCATTAGTGGTTGCGGGGACGCAAATGGCTACAGGCCACCGTACCATGGATACTCGCCTCTATTTTGAAGGTGAGCTGATTGATGCAGCGACTAATAAACCGGTTATCAAAGTCGTTCGTCAGGGCGAAGGTAAAGACCTGAATAACGAAAGTACGCCAATGGCTTTCGAAAATATTAAACAAGTTATTGATGACATGGCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAG", - "dna_sequence_length": 669, - "functions": [ - "lipoprotein" - ], - "id": "CDS_1418", - "location": [ - [ - "NC_000913", - 1502457, - "+", - 669 - ] - ], - "md5": "13e8fa0fc4398654ddd763f437f14bcb", - "parent_gene": "", - "protein_md5": "b0e55e17c63be92cf77373e9cd1ef18e", - "protein_translation": "MRTTSFAKVAALCGLLALSGCASKITQPDKYSGFLNNYSDLKETTSATGKPVLRWVDPSFDQSKYDSIVWNPITYYPVPKPSTQVGQKVLDKILNYTNTEMKEAIAQRKPLVTTAGPRSLIFRGAITGVDTSKEGLQFYEVVPVALVVAGTQMATGHRTMDTRLYFEGELIDAATNKPVIKVVRQGEGKDLNNESTPMAFENIKQVIDDMATDATMFDVNKK", - "protein_translation_length": 222, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14359" - ], - [ - "gene_synonym", - "ASAP:ABE-0285051" - ], - [ - "gene_synonym", - "orf1" - ], - [ - "gene_synonym", - "b4578" - ], - [ - "gene_synonym", - "ASAP:ABE-0285052" - ], - [ - "gene_synonym", - "yncK" - ], - [ - "gene_synonym", - "GeneID:4056028" - ], - [ - "gene_synonym", - "insP" - ], - [ - "gene_synonym", - "orfA" - ], - [ - "gene_synonym", - "tnpA" - ], - [ - "gene_synonym", - "ECK1425" - ], - [ - "gene_synonym", - "JW5961" - ], - [ - "gene_synonym", - "ASAP:ABE-0285110" - ], - [ - "gene_synonym", - "JW5227" - ] - ], - "dna_sequence": "ATGATACTTTGGTCTGTGAAAAAAGAAACCGATATCCGGCGTGGAAGGCATTGTGTTTTCCTGATGCATGTTCACCTGCTCTTTGTCACCAGATACCGACGCCAGATTTTTGACCATGACGCGACAGAAAAACTACGCACTTACTTTTCAAATGTATGTGCTGATTTTGAAGCTGAACTGGTTGAAATGGATGGCGAACCAGATCACGTCCATTTGTTAATTAACTATCCTCCCAAACTGGCGATATCCAGTCTGGTAAACAGCCTCAAAGGCGTATCGGGTAGGTGACTGCGACGAGATCGACCAGATATTGCATTCAGGTATTACTACAAAGGCGTTTTGTGGAGTCCTGGCTATTTTGCCAGTAGCTGCGGAGGTGCGCCAATATCCGTCATCCGCCAATACATTGAACAACAGCAAACACCTGGTCAG", - "dna_sequence_length": 432, - "id": "CDS_1419", - "location": [ - [ - "NC_000913", - 1503649, - "-", - 432 - ] - ], - "md5": "3c63df6473020db18bc7ae17915972af", - "parent_gene": "", - "protein_md5": "68bcd2f0d8cfb5780beb48c9bc1e77e3", - "protein_translation": "MILWSVKKETDIRRGRHCVFLMHVHLLFVTRYRRQIFDHDATEKLRTYFSNVCADFEAELVEMDGEPDHVHLLINYPPKLAISSLVNSLKGVSGR", - "protein_translation_length": 95, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415949.2" - ], - [ - "gene_synonym", - "ydcM" - ], - [ - "gene_synonym", - "GI:288551665" - ], - [ - "gene_synonym", - "ECK1426" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76102" - ], - [ - "gene_synonym", - "orf2" - ], - [ - "gene_synonym", - "JW5228" - ], - [ - "gene_synonym", - "insQ" - ], - [ - "gene_synonym", - "GeneID:944942" - ], - [ - "gene_synonym", - "tnpB" - ], - [ - "gene_synonym", - "ASAP:ABE-0004778" - ], - [ - "gene_synonym", - "orfB" - ], - [ - "gene_synonym", - "b1432" - ], - [ - "gene_synonym", - "EcoGene:EG13756" - ] - ], - "dna_sequence": "ATGAGGCGCTTCGCAGGCGCATGTCGTTTCGTTTTCAATCGTGCTCTGGCACGTCAGAATGAGAATCATGAGGCCGGTAATAAATACATCCCTTACGGGAAAATGGCTTCCTGGCTGGTTGAGTGGAAAAATGCCACTGAAACGCAATGGCTTAAAGATTCTCCCTCACAGCCATTGCAACAGTCACTGAAAGACCTTGAGCGGGCTTACAAAAACTTCTTCCGGAAGCGGGCTGCTTTTCCCCGATTCAAAAAGCGGGGACAGAATGATGCATTCCGCTACCCGCAGGGCGTTAAGCTCGATCAGGAAAACAGCCGTATTTTTCTGCCGAAACTGGGCTGGATGCGCTACCGGAACAGCCGTCAGGTCACGGGTGTTGTGAAAAATGTCACTGTCAGCCAGTCCTGCGGTAAGTGGTACATCAGTATTCAGACAGAAAGTGAAGTATCAACTCCGGTTCACCCTTCAGCATCAATGGTCGGGCTGGATGCTGGCGTGGCTAAACTCGCCACGCTGTCAGATGGCACAGTCTTTGAGCCTGTAAACAGTTTTCAGAAAAACCAGAAGAAGCTGGCGAGACTTCAGCGACAGTTAAGCCGCAAGGTCAAATTCAGCAACAACTGGCAAAAGCAGAAACGCAAAATACAGCGACTGCATTCCTGTATCGCAAATATCCGCAGGGACTACCTTCACAAAGTCACAACGGCCGTCAGCAAAAACCACGCAATGATAGTCATTGAGGATTTGAAGGTCAGCAACATGTCAAAGTCAGCAGCGGGTACGGTCAGCCAGCCGGGGCGCAATGTCCGGGCAAAATCAGGTTTAAACCGTTCGATACTGGATCAGGGCTGGTATGAAATGCGCCGCCAGCTTGCGTATAAGCAGCTCTGGCGTGGCGGTCAGGTGCTTGCTGTTCCGCCAGCGTATACAAGCCAGCGTTGCGCGTACTGTGGTCATACAGCGAAAGAGAACCGCCTGTCACAAAGTAAATTCAGATGCCAGGTATGTGGATATACAGCGAACGCCGATGTAAATGGCGCTCGCAACATTTTAGCGGCGGGGCACGCCGTTCTTGCCTGTGGAGAGATGGTGCAGTCAGGCCGCCCGTTGAAGCAGGAACCCACCGAAATGATTCAGGCGACAGCCTGA", - "dna_sequence_length": 1149, - "functions": [ - "IS609 transposase B" - ], - "id": "CDS_1420", - "location": [ - [ - "NC_000913", - 1503717, - "+", - 1149 - ] - ], - "md5": "81e2bc76b7f1da6a4e60bd0e3401e7ea", - "parent_gene": "", - "protein_md5": "fa5f21e6bf49b2c4f34ff0ab90a67afb", - "protein_translation": "MRRFAGACRFVFNRALARQNENHEAGNKYIPYGKMASWLVEWKNATETQWLKDSPSQPLQQSLKDLERAYKNFFRKRAAFPRFKKRGQNDAFRYPQGVKLDQENSRIFLPKLGWMRYRNSRQVTGVVKNVTVSQSCGKWYISIQTESEVSTPVHPSASMVGLDAGVAKLATLSDGTVFEPVNSFQKNQKKLARLQRQLSRKVKFSNNWQKQKRKIQRLHSCIANIRRDYLHKVTTAVSKNHAMIVIEDLKVSNMSKSAAGTVSQPGRNVRAKSGLNRSILDQGWYEMRRQLAYKQLWRGGQVLAVPPAYTSQRCAYCGHTAKENRLSQSKFRCQVCGYTANADVNGARNILAAGHAVLACGEMVQSGRPLKQEPTEMIQATA", - "protein_translation_length": 382, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ydcO" - ], - [ - "gene_synonym", - "b1433" - ], - [ - "gene_synonym", - "ECK1427" - ], - [ - "gene_synonym", - "GeneID:947247" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76103" - ], - [ - "gene_synonym", - "ASAP:ABE-0004780" - ], - [ - "gene_synonym", - "NP_415950.4" - ], - [ - "gene_synonym", - "JW5229" - ], - [ - "gene_synonym", - "GI:90111272" - ], - [ - "gene_synonym", - "EcoGene:EG13758" - ] - ], - "dna_sequence": "ATGCGTCTGTTTTCTATTCCTCCACCCACGCTACTGGCGGGGTTTCTGGCGGTATTAATTGGCTACGCCAGTTCAGCGGCAATAATCTGGCAAGCAGCGATTGTCGCCGGAGCCACCACTGCACAAATCTCTGGCTGGATGACGGCGCTGGGGCTGGCAATGGGCGTCAGTACGCTGACTCTGACATTATGGTATCGCGTACCTGTTCTCACCGCATGGTCAACGCCTGGCGCGGCTTTGTTGGTCACCGGATTGCAGGGACTAACACTTAACGAAGCCATCGGCGTTTTTATTGTCACCAACGCGCTAATAGTCCTCTGCGGCATAACGGGACTCTTTGCTCGTCTGATGCGCATTATTCCGCACTCGCTTGCGGCGGCAATGCTTGCCGGGATTTTATTACGCTTTGGTTTACAGGCGTTTGCCAGTCTGGACGGTCAATTTACGTTGTGTGGAAGTATGTTGCTGGTATGGCTGGCAACCAAGGCCGTTGCGCCGCGCTATGCGGTAATTGCCGCGATGATTATTGGGATCGTGATCGTCATCGCGCAAGGTGACGTTGTCACAACTGATGTTGTCTTTAAACCCGTTCTCCCCACTTATATTACCCCTGATTTTTCGTTTGCTCACAGCCTGAGCGTTGCACTCCCCCTTTTTCTGGTGACGATGGCATCGCAAAACGCACCGGGTATCGCAGCAATGAAAGCAGCTGGATATTCGGCTCCTGTTTCGCCATTAATTGTATTTACTGGATTGCTGGCACTGGTTTTTTCCCCTTTCGGCGTTTATTCCGTCGGTATTGCGGCAATCACCGCGGCTATTTGCCAAAGCCCGGAAGCGCATCCGGATAAAGATCAACGTTGGCTGGCCGCTGCCGTTGCAGGCATTTTCTATTTGCTCGCAGGTCTGTTTGGTAGTGCCATTACCGGGATGATGGCTGCCCTGCCCGTAAGTTGGATCCAGATGCTGGCAGGTCTGGCGCTGTTAAGTACCATCGGCGGCAGTTTGTATCAGGCGCTGCATAATGAGCGTGAGCGAGACGCGGCGGTGGTGGCATTTCTGGTAACGGCAAGTGGATTGACGCTGGTCGGGATTGGTTCTGCGTTTTGGGGATTAATTGCCGGAGGCGTTTGTTACGTGGTGTTGAATTTAATCGCTGACAGAAACCGATATTGA", 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"ASAP:ABE-0004783" - ], - [ - "gene_synonym", - "b1434" - ], - [ - "gene_synonym", - "GeneID:946000" - ], - [ - "gene_synonym", - "EcoGene:EG13757" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77626" - ], - [ - "gene_synonym", - "GI:16129393" - ] - ], - "dna_sequence": "ATGGAAAATCTCGCTCGCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAATTGCCACCGGGTTGAACGTACCATTTTCAACATTTATTTCTCCGCCGCAGTCCGCTACGCCTTCAGTTTATGATCCACAACAGCAGGCGATGGTGATCACTTCGCTGTTTCCTTATGATCCACAACTCTGCTTTGAACACTTCTCGATTCAGATGGCATCTGGTGCAATAAGCGAATCGACGCCCCATGAGAAGGGGGTAATCGAACATGTCGTCGTCATTGATGGACAACTTGATCTGTGCGTTGATGGGGAATGGCAGACCCTTAATTGTGGGGAAGGCGTTCGATTTGCTGCAGACGTCACGCATATCTATCGTAATGGTGGGGAGCAAACCGTACATTTTCATTCCCTCATCCATTACCCGCGCAGTTAA", - "dna_sequence_length": 537, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_1422", - "location": [ - [ - "NC_000913", - 1506172, - "+", - 537 - ] - ], - "md5": "ef05a74caf3b4acad94f876ee2ee4722", - "parent_gene": "", - "protein_md5": "2cd987586fc588c4ed931bb6c8fe179e", - "protein_translation": "MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS", - "protein_translation_length": 178, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1431" - ], - [ - "gene_synonym", - "NP_415952.2" - ], - [ - "gene_synonym", - "ECK1429" - ], - [ - "gene_synonym", - "ASAP:ABE-0004786" - ], - [ - "gene_synonym", - "GeneID:945993" - ], - [ - "gene_synonym", - "b1435" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76104" - ], - [ - "gene_synonym", - "GI:90111273" - ], - [ - "gene_synonym", - "EcoGene:EG13759" - ], - [ - "gene_synonym", - "ydcP" - ] - ], - "dna_sequence": "GTGACCGTATCTTCTCATCGACTTGAACTGTTAAGCCCGGCACGCGATGCCGCCATTGCCCGCGAAGCTATTTTGCACGGTGCCGATGCTGTTTATATCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCTTGAAAGATATTGCCGAGCTGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCCGCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGATATTCCGCCGATTGAACTGCACGCCAGTACGCAGTGCGACATTCGTACAGTTGAAAAAGCGAAGTTCCTCTCTGATGTTGGCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGATCAGATCCGCGCGATTCACCAGGCTACGGACGCGACCATTGAATTCTTTATTCATGGGGCACTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGCCAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAAAACATCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGTGTACGCTCCTTCAAGATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGACTTTCCACCGTGGTAGCACAGATTATTTTGTGAATGCCCGTAAAGGCGATATTGGCGCGTTCGATTCGCCGAAATTTATCGGCCTGCCGGTAGGCGAAGTAGTGAAAGTGGCGAAAGATCATCTCGATGTTGCCGTTACCGAGCCACTGGCAAATGGCGATGGCCTGAACGTGTTGATTAAACGTGAAGTCGTCGGTTTTCGTGCCAATACGGTCGAGAAAACCGGAGAAAATCAGTACCGCGTCTGGCCCAATGAAATGCCAGCAGATTTGCACAAAATTCGTCCACATCACCCACTAAACCGTAATCTTGATCATAACTGGCAGCAGGCACTGACAAAAACCTCCAGCGAACGTCGGGTGGCGGTAGACATTGAACTGGGCGGCTGGCAGGAACAACTGATTCTGACCCTCACCAGTGAAGAGGGTGTCAGCATCACGCATACGCTGGACGGGCAGTTCGACGAAGCCAATAACGCCGAAAAAGCAATGAACAATCTGAAGGATGGTCTGGCAAAACTGGGGCAAACCCTCTATTACGCCCGCGATGTGCAAATTAATTTGCCGGGGGCGCTGTTTGTACCAAACAGTCTGTTAAACCAGTTCCGCCGTGAAGCTGCTGACATGCTGGATGCTGCGCGTCTTGCCAGTTACCAGCGCGGCAGCCGTAAACCGGTTGCTGATCCTGCGCCGGTTTATCCGCAAACGCATCTGAGTTTCCTCGCGAACGTATACAACCAGAAAGCGCGTGAATTTTATCATCGCTATGGTGTGCAGCTGATTGACGCGGCGTATGAAGCACATGAAGAGAAGGGCGAAGTCCCGGTGATGATCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAATATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGATTGCCGCCCATGCGAGATGCACGTCATTGGCAAAATCAAAAATCACATACTGAAAATGCCGTTACCGGGAAGCGTAGTGGCATCCGTAAGTCCGGATGAGCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAA", 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653, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004789" - ], - [ - "gene_synonym", - "JW1432" - ], - [ - "gene_synonym", - "yncJ" - ], - [ - "gene_synonym", - "GeneID:945990" - ], - [ - "gene_synonym", - "ECK1430" - ], - [ - "gene_synonym", - "b1436" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64459" - ], - [ - "gene_synonym", - "NP_415953.1" - ], - [ - "gene_synonym", - "GI:16129395" - ], - [ - "gene_synonym", - "EcoGene:EG14300" - ] - ], - "dna_sequence": "ATGTTTACGAAGGCGTTATCGGTTGTCTTATTAACGTGTGCTCTGTTTTCAGGACAACTCATGGCAGGGCACAAAGGACATGAATTTGTGTGGGTAAAGAATGTGGATCATCAGCTGCGTCATGAAGCGGACAGCGATGAATTGCGTGCTGTGGCGGAAGAGTCGGCGGAAGGTTTGCGCGAGCATTTTTACTGGCAAAAATCGCGCAAACCAGAAGCGGGACAACGTTGA", - "dna_sequence_length": 231, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1424", - "location": [ - [ - "NC_000913", - 1509064, - "-", - 231 - ] - ], - "md5": "cbaaeea95b7ce15b7cdc9c4910ce0c0c", - "parent_gene": "", - "protein_md5": "e2b541f9c8097bb9eceabc94cdab3c45", - "protein_translation": "MFTKALSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEADSDELRAVAEESAEGLREHFYWQKSRKPEAGQR", - "protein_translation_length": 76, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5230" - ], - [ - "gene_synonym", - "ASAP:ABE-0285053" - ], - [ - "gene_synonym", - "GI:94541092" - ], - [ - "gene_synonym", - "yncN" - ], - [ - "gene_synonym", - "ECK1431" - ], - [ - "gene_synonym", - "GeneID:945989" - ], - [ - "gene_synonym", - "NP_415954.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76106" - ], - [ - "gene_synonym", - "hicA" - ], - [ - "gene_synonym", - "b4532" - ], - [ - "gene_synonym", - "EcoGene:EG14421" - ] - ], - "dna_sequence": "GTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAGGTTTCATGGGAGGCGCAGTGTCATGCCGCGTCACCCCTGCGATGAGATTAAAGAACCATTGCGTAAAGCAATCCTGAAACAACTCGGTTTGAGTTAA", - "dna_sequence_length": 177, - "functions": [ - "mRNA interferase toxin of the HicAB toxin-antitoxin system" - ], - "id": "CDS_1425", - "location": [ - [ - "NC_000913", - 1509286, - "+", - 177 - ] - ], - "md5": "531e282eedfeddd1d67cd51de3ab9230", - "parent_gene": "", - "protein_md5": "465b7918caca175e1263e3281b0c1d17", - "protein_translation": "MKQSEFRRWLESQGVDVANGSNHLKLRFHGRRSVMPRHPCDEIKEPLRKAILKQLGLS", - "protein_translation_length": 58, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004796" - ], - [ - "gene_synonym", - "ECK1432" - ], - [ - "gene_synonym", - "JW1433" - ], - [ - "gene_synonym", - "GeneID:946001" - ], - [ - "gene_synonym", - "EcoGene:EG13760" - ], - [ - "gene_synonym", - "hicB" - ], - [ - "gene_synonym", - "NP_415955.2" - ], - [ - "gene_synonym", - "GI:145698257" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67697" - ], - [ - "gene_synonym", - "b1438" - ], - [ - "gene_synonym", - "ydcQ" - ] - ], - "dna_sequence": "ATGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTTTTGTGGATATCCCTGAAGCGTTGACCCAGGGCGAAACTGTCGCTGAAGCGATGGAAGCGGCAAAAGATGCTTTACTGACCGCATTTGATTTTTATTTTGAAGATAACGAGCTTATCCCTTTACCTTCGCCATTAAATAGTCACGATCACTTTATTGAAGTACCTTTGAGCGTCGCCTCTAAGGTATTGCTGTTAAATGCTTTTTTACAGTCAGAAATCACTCAGCAAGAGTTAGCCAGGCGAATTGGCAAACCTAAACAGGAGATTACTCGCCTATTTAACTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTATCGCTGGTGATGGTTTAA", - "dna_sequence_length": 417, - "functions": [ - "antitoxin for the HicAB toxin-antitoxin system" - ], - "id": "CDS_1426", - "location": [ - [ - "NC_000913", - 1509508, - "+", - 417 - ] - ], - "md5": "0a3625d9ea8fdbd5aa6f41f929eb6bd2", - "parent_gene": "", - "protein_md5": "c55ae963f2dc70de82e2caaa66c2c1b6", - "protein_translation": "MRYPVTLTPAPEGGYMVSFVDIPEALTQGETVAEAMEAAKDALLTAFDFYFEDNELIPLPSPLNSHDHFIEVPLSVASKVLLLNAFLQSEITQQELARRIGKPKQEITRLFNLHHATKIDAVQLAAKALGKELSLVMV", - "protein_translation_length": 138, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004800" - ], - [ - "gene_synonym", - "NP_415956.1" - ], - [ - "gene_synonym", - "GeneID:946004" - ], - [ - "gene_synonym", - "ydcR" - ], - [ - "gene_synonym", - "ECK1433" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77730" - ], - [ - "gene_synonym", - "JW1434" - ], - [ - "gene_synonym", - "GI:16129398" - ], - [ - "gene_synonym", - "b1439" - ], - [ - "gene_synonym", - "EcoGene:EG13761" - ] - ], - "dna_sequence": "ATGAAAAAATACCAGCAGCTTGCAGAACAATTACGCGAGCAGATTGCGTCGGGTATCTGGCAACCCGGCGATCGTTTGCCTTCGTTGCGTGACCAGGTGGCGCTTTCAGGCATGAGCTTTATGACTGTCAGCCATGCCTATCAGTTGCTCGAAAGTCAGGGATATATTATCGCACGACCGCAGTCGGGTTATTACGTTGCGCCACAGGCAATAAAAATGCCGAAAGCGCCAGTCATTCCAGTCACTCGAGATGAAGCAGTCGATATCAACACTTATATTTTTGATATGTTGCAGGCCAGTCGCGATCCGTCGGTCGTTCCGTTTGCCTCGGCCTTTCCCGACCCGCGACTTTTCCCCCTCCAACAACTAAACCGCTCGCTGGCGCAGGTAAGCAAAACCGCCACAGCGATGAGCGTGATTGAAAACTTACCGCCAGGAAACGCAGAACTGCGTCAGGCTATTGCTCGTCGCTATGCCTTACAGGGCATCACCATTTCTCCTGATGAAATTGTCATTACTGCCGGGGCGTTAGAGGCATTAAACCTCAGTTTGCAAGCGGTAACTGAACCGGGCGATTGGGTGATAGTAGAGAATCCTTGTTTCTACGGTGCGTTGCAGGCGCTGGAGCGGCTACGGCTGAAGGCGTTATCGGTGGCGACGGATGTTAAAGAAGGGATAGATCTTCAGGCGCTGGAACTGGCGTTGCAGGAGTATCCGGTGAAAGCGTGCTGGCTGATGACTAATAGCCAGAATCCACTCGGATTTACCTTAACGCCGCAAAAAAAAGCACAACTGGTGGCGTTGCTCAATCAGTACAACGTAACGCTGATTGAAGATGACGTTTACAGCGAACTTTATTTTGGACGGGAAAAACCGCTGCCTGCGAAAGCGTGGGATCGCCACGATGGCGTTTTGCATTGCTCTTCGTTTTCGAAATGTCTGGTGCCTGGTTTTCGTATTGGTTGGGTCGCCGCCGGAAAACATGCACGTAAAATTCAACGCTTGCAGTTGATGAGTACGCTTTCCACCAGCTCACCGATGCAACTTGCGCTGGTGGATTACCTTTCCACGCGCCGATACGACGCCCATCTTCGTCGCCTGCGTCGCCAGCTTGCGGAACGTAAACAACGTGCCTGGCAGGCACTGCTGCGTTATCTGCCTGCGGAAGTGAAAATTCATCATAATGACAGTGGTTACTTTCTCTGGTTGGAGCTCCCCGAGCCGTTAGATGCCGGCGAATTAAGCCTGGCGGCACTGACGCATCATATCAGTATTGCGCCGGGTAAAATGTTTTCTACCGGTGAAAACTGGTCACGTTTTTTCCGTTTTAATACCGCGTGGCAGTGGGGAGAGCGTGAAGAACAGGCGGTAAAACAATTAGGCAAACTTATTCAAGAACGGCTGTAA", 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- [ - "gene_synonym", - "NP_415957.1" - ], - [ - "gene_synonym", - "ECK1434" - ], - [ - "gene_synonym", - "GeneID:946005" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76108" - ], - [ - "gene_synonym", - "JW1435" - ], - [ - "gene_synonym", - "EcoGene:EG13762" - ], - [ - "gene_synonym", - "GI:16129399" - ], - [ - "gene_synonym", - "ydcS" - ] - ], - "dna_sequence": "ATGAGCAAGACATTTGCCCGCAGCAGCCTGTGTGCGCTCAGCATGACAATAATGACCGCTCACGCCGCCGAACCGCCTACCAATTTAGATAAACCGGAAGGGCGACTGGATATTATCGCCTGGCCGGGATACATCGAACGCGGACAAACTGATAAACAATACGACTGGGTAACGCAGTTCGAAAAAGAGACAGGCTGCGCGGTGAATGTGAAAACCGCCGCGACTTCCGATGAAATGGTCAGTCTGATGACCAAAGGGGGTTACGATCTGGTTACGGCATCCGGCGATGCCTCGCTGCGTTTGATTATGGGTAAACGCGTGCAGCCGATTAATACCGCATTGATTCCCAACTGGAAAACGCTCGATCCGCGCGTGGTTAAAGGCGACTGGTTTAATGTTGGCGGCAAAGTTTACGGCACACCTTACCAATGGGGGCCGAACCTGCTGATGTACAACACTAAAACCTTCCCGACGCCGCCGGATAGCTGGCAAGTGGTTTTTGTTGAGCAAAATCTGCCGGACGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGTTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGAAAGTGCTGCGCGCTCAACACAGTTTGATCCATCGCTACTGGCATGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGCCTACAAATGGATGAACTGGTCATTAACGCCAAAAGTGCAGGGCGATGTGGCGGCCTGGTTTGGCTCGTTACCGGTAGTGCCGGAAGGGTGTAAAGCCAGTCCGTTATTAGGCGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTACATTGCCATTATGGGCGGTCGCTAA", 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"NP_415958.1" - ], - [ - "gene_synonym", - "GI:16129400" - ], - [ - "gene_synonym", - "GeneID:946007" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77795" - ], - [ - "gene_synonym", - "JW1436" - ], - [ - "gene_synonym", - "ydcT" - ] - ], - "dna_sequence": "ATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATGGTGAGTTCTTCTCTATGCTGGGGCCGTCCGGCTCCGGCAAAACCACCTGCCTGCGCCTGATTGCTGGCTTCGAACAGCTTTCCGGCGGGGCTATCTCTATCTTTGGTAAACCCGCCAGCAATCTGCCACCGTGGGAGCGGGACGTGAATACTGTCTTTCAGGACTACGCGCTATTTCCGCATATGTCGATTCTTGACAATGTCGCCTATGGGCTGATGGTCAAAGGCGTGAATAAAAAGCAGCGGCACGCAATGGCGCAAGAGGCGCTGGAGAAAGTGGCGTTGGGGTTTGTACATCAACGTAAACCGTCACAACTTTCTGGTGGTCAGCGCCAGCGGGTTGCTATCGCCAGAGCATTGGTGAATGAACCGCGCGTATTGCTGTTGGATGAACCGCTCGGCGCACTGGATCTCAAATTGCGTGAGCAGATGCAGCTGGAACTGAAAAAACTGCAACAGTCTCTCGGTATCACTTTTATCTTCGTTACCCACGATCAGGGCGAAGCGTTATCGATGTCCGATCGTGTGGCGGTTTTCAATAATGGACGCATTGAGCAGGTCGATTCCCCGCGCGATCTCTATATGCGCCCGCGCACGCCGTTTGTTGCCGGGTTCGTTGGTACATCGAATGTTTTTGATGGACTGATGGCAGAGAAACTTTGTGGCATGACGGGAAGCTTCGCCCTGCGACCGGAACATATCCGCCTCAACACCCCTGGTGAACTGCAGGCCAATGGCACGATCCAGGCGGTGCAATATCAGGGCGCGGCAACTCGTTTTGAACTGAAATTGAACGGCGGTGAAAAACTGCTTGTGAGTCAGGCCAATATGACAGGCGAAGAACTGCCTGCCACGCTCACGCCCGGACAACAGGTGATGGTTTCCTGGTCGCGTGATGTGATGGTGCCGCTGGTTGAGGAGAGGTGA", 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"UniProtKB/Swiss-Prot:P77156" - ], - [ - "gene_synonym", - "GI:16129401" - ], - [ - "gene_synonym", - "EcoGene:EG13764" - ], - [ - "gene_synonym", - "JW1437" - ], - [ - "gene_synonym", - "ydcU" - ] - ], - "dna_sequence": "ATGGCGATGAATGTATTGCAATCACCTTCACGTCCAGGTCTGGGTAAGGTGTCCGGTTTCTTCTGGCATAATCCGGGGCTGGGGCTGTTTTTACTGCTGCTTGGCCCGCTAATGTGGTTTGGCATTGTCTATTTCGGCTCGCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCATGTCGGTAACGCCGGAACTGACGCTGGCGAATATCCGTGCGCTGTTTAATCCGGCGAATTACGACATCATTCTCCGCACGCTGACTATGGCTGTGGCAGTCACTATCGCCAGCGCCATTCTGGCTTTTCCAATGGCGTGGTATATGGCGCGCTATACCAGCGGGAAAATGAAAGCGTTTTTTTATATTGCGGTAATGTTGCCGATGTGGGCGAGCTACATTGTTAAAGCCTATGCCTGGACGTTATTGCTGGCAAAAGATGGCGTGGCTCAGTGGTTTTTACAACATCTTGGGCTGGAACCACTGCTGACTGCGTTCCTTACATTACCTGCGGTGGGCGGAAATACGCTGTCAACTTCCGGGCTGGGGCGCTTTCTGGTGTTTCTCTATATCTGGTTGCCGTTCATGATCCTGCCCGTTCAGGCGGCGCTTGAGCGTTTGCCGCCGTCATTGTTGCAGGCGTCGGCTGATCTCGGCGCACGTCCACGACAAACCTTTCGCTATGTGGTGCTGCCGCTGGCAATCCCGGGTATTGCCGCTGGCTCTATCTTTACCTTCTCACTCACACTGGGCGATTTTATCGTCCCGCAGCTGGTTGGTCCTCCAGGATATTTTATCGGCAATATGGTTTATTCCCAGCAGGGGGCGATTGGCAATATGCCGATGGCGGCGGCATTCACCCTGGTGCCGATTATTCTCATCGCACTGTACCTGGCGTTCGTGAAACGTCTGGGAGCGTTCGATGCACTCTGA", - "dna_sequence_length": 942, - "functions": [ - "putative ABC transporter permease" - ], - "id": "CDS_1430", - "location": [ - [ - "NC_000913", - 1513831, - "+", - 942 - ] - ], - "md5": "3016b414a954e23b8adc1928fe088e33", - "parent_gene": "", - "protein_md5": "76c746d720ffe64193d2b38cf28c3c52", - "protein_translation": "MAMNVLQSPSRPGLGKVSGFFWHNPGLGLFLLLLGPLMWFGIVYFGSLLTLLWQGFYTFDDFTMSVTPELTLANIRALFNPANYDIILRTLTMAVAVTIASAILAFPMAWYMARYTSGKMKAFFYIAVMLPMWASYIVKAYAWTLLLAKDGVAQWFLQHLGLEPLLTAFLTLPAVGGNTLSTSGLGRFLVFLYIWLPFMILPVQAALERLPPSLLQASADLGARPRQTFRYVVLPLAIPGIAAGSIFTFSLTLGDFIVPQLVGPPGYFIGNMVYSQQGAIGNMPMAAAFTLVPIILIALYLAFVKRLGAFDAL", - "protein_translation_length": 313, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_415960.1" - ], - [ - "gene_synonym", - "b1443" - ], - [ - "gene_synonym", - "ECK1437" - ], - [ - "gene_synonym", - "GI:16129402" - ], - [ - "gene_synonym", - "EcoGene:EG13765" - ], - [ - "gene_synonym", - "GeneID:945903" - ], - [ - "gene_synonym", - "ASAP:ABE-0004809" - ], - [ - "gene_synonym", - "ydcV" 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"gene_synonym", - "prr" - ], - [ - "gene_synonym", - "JW1439" - ], - [ - "gene_synonym", - "ydcW" - ] - ], - "dna_sequence": "ATGCAACATAAGTTACTGATTAACGGAGAACTGGTTAGCGGCGAAGGGGAAAAACAGCCTGTCTATAATCCGGCAACGGGGGACGTTTTACTGGAAATTGCCGAGGCATCCGCAGAGCAGGTCGATGCTGCTGTGCGCGCGGCAGATGCAGCATTTGCCGAATGGGGGCAAACCACGCCGAAAGTGCGTGCGGAATGTCTGCTGAAACTGGCTGATGTTATCGAAGAAAATGGTCAGGTTTTTGCCGAACTGGAGTCCCGTAATTGTGGCAAACCGCTGCATAGTGCGTTCAATGATGAAATCCCGGCGATTGTCGATGTTTTTCGCTTTTTCGCGGGTGCGGCGCGCTGTCTGAATGGTCTGGCGGCAGGTGAATATCTTGAAGGTCATACTTCGATGATCCGTCGCGATCCGTTGGGGGTCGTGGCTTCTATCGCACCGTGGAATTATCCGCTGATGATGGCCGCGTGGAAACTTGCTCCGGCGCTGGCGGCAGGGAACTGCGTAGTGCTTAAACCATCAGAAATTACCCCGCTGACCGCGTTGAAGTTGGCAGAGCTGGCGAAAGATATCTTCCCGGCAGGCGTGATTAACATACTGTTTGGCAGAGGCAAAACGGTGGGTGATCCGCTGACCGGTCATCCCAAAGTGCGGATGGTGTCGCTGACGGGCTCTATCGCCACCGGCGAGCACATCATCAGCCATACCGCGTCGTCCATTAAGCGTACTCATATGGAACTTGGTGGCAAAGCGCCAGTGATTGTTTTTGATGATGCGGATATTGAAGCAGTGGTCGAAGGTGTACGTACATTTGGCTATTACAATGCTGGACAGGATTGTACTGCGGCTTGTCGGATCTACGCGCAAAAAGGCATTTACGATACGCTGGTGGAAAAACTGGGTGCTGCGGTGGCAACGTTAAAATCTGGTGCGCCAGATGACGAGTCTACGGAGCTTGGACCTTTAAGCTCGCTGGCGCATCTCGAACGCGTCGGCAAGGCAGTAGAAGAGGCGAAAGCGACAGGGCACATCAAAGTGATCACTGGCGGTGAAAAGCGCAAGGGTAATGGCTATTACTATGCGCCGACGCTGCTGGCTGGCGCATTACAGGACGATGCCATCGTGCAAAAAGAGGTATTTGGTCCAGTAGTGAGTGTTACGCCCTTCGACAACGAAGAACAGGTGGTGAACTGGGCGAATGACAGCCAGTACGGACTTGCATCTTCGGTATGGACGAAAGATGTGGGCAGGGCGCATCGCGTCAGCGCACGGCTGCAATATGGTTGTACCTGGGTCAATACCCATTTCATGCTGGTAAGTGAAATGCCGCACGGTGGGCAGAAACTTTCTGGTTACGGCAAGGATATGTCACTTTATGGGCTGGAGGATTACACCGTCGTCCGCCACGTCATGGTTAAACATTAA", 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"gene_synonym", - "YP_001165318.1" - ], - [ - "gene_synonym", - "yncL" - ], - [ - "gene_synonym", - "b4598" - ], - [ - "gene_synonym", - "GI:145698258" - ], - [ - "gene_synonym", - "GeneID:5061503" - ], - [ - "gene_synonym", - "ECK4408" - ] - ], - "dna_sequence": "ATGAATGTTTCCAGTAGAACTGTAGTACTGATAAATTTCTTTGCTGCTGTTGGTTTGTTTACTCTTATCTCTATGAGATTTGGCTGGTTTATTTGA", - "dna_sequence_length": 96, - "functions": [ - "stress-induced small inner membrane enterobacterial protein" - ], - "id": "CDS_1433", - "location": [ - [ - "NC_000913", - 1517194, - "-", - 96 - ] - ], - "md5": "643c7a9197ee36c916368dba1e74dec8", - "parent_gene": "", - "protein_md5": "d92b452d2aa3b088db0e63924c1260c0", - "protein_translation": "MNVSSRTVVLINFFAAVGLFTLISMRFGWFI", - "protein_translation_length": 31, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5232" - ], - [ - "gene_synonym", - "ECK1439" - ], - [ - "gene_synonym", - "ASAP:ABE-0004818" - ], - [ - "gene_synonym", - "GI:90111274" - ], - [ - "gene_synonym", - "NP_415962.2" - ], - [ - "gene_synonym", - "EcoGene:EG13767" - ], - [ - "gene_synonym", - "GeneID:945936" - ], - [ - "gene_synonym", - "ydcX" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64453" - ], - [ - "gene_synonym", - "b1445" - ] - ], - "dna_sequence": "ATGTCTCTCTATCAACACATGCTTGTTTTTTATGCGGTTATGGCAGCAATCGCATTTCTTATCACCTGGTTTCTTTCTCACGATAAGAAACGCATCCGTTTCTTAAGCGCCTTTCTGGTGGGGGCAACATGGCCGATGAGTTTCCCGGTGGCGCTGTTGTTTTCACTGTTTTAA", - "dna_sequence_length": 174, - "functions": [ - "DUF2566 family protein" - ], - "id": "CDS_1434", - "location": [ - [ - "NC_000913", - 1517389, - "+", - 174 - ] - ], - "md5": "fb8f87e582da2bfd30faf9479b58124f", - "parent_gene": "", - "protein_md5": "9e97615d3b36973dd8d1c14cc4ebc102", - "protein_translation": "MSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATWPMSFPVALLFSLF", - "protein_translation_length": 57, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1440" - ], - [ - "gene_synonym", - "b1446" - ], - [ - "gene_synonym", - "ASAP:ABE-0004821" - ], - [ - "gene_synonym", - "JW1441" - ], - [ - "gene_synonym", - "GI:16129405" - ], - [ - "gene_synonym", - "GeneID:945916" - ], - [ - "gene_synonym", - "ydcY" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64455" - ], - [ - "gene_synonym", - "EcoGene:EG13768" - ], - [ - "gene_synonym", - "NP_415963.1" - ] - ], - "dna_sequence": "ATGTCGCATCTGGATGAAGTCATCGCGCGCGTGGATGCCGCGATTGAAGAGAGCGTCATTGCCCATATGAACGAATTATTAATCGCCCTGAGCGATGACGCGGAGTTAAGTCGGGAAGATCGCTACACCCAGCAGCAACGTCTGCGCACAGCGATCGCCCATCACGGTCGCAAGCATAAAGAAGATATGGAAGCGCGCCACGAACAGTTAACCAAAGGCGGCACCATCCTCTGA", - "dna_sequence_length": 234, - "functions": [ - "DUF2526 family protein" - ], - "id": "CDS_1435", - "location": [ - [ - "NC_000913", - 1517648, - "+", - 234 - ] - ], - "md5": "b5a9ee7afd640566c47b22d45be9dd4e", - "parent_gene": "", - "protein_md5": "8de8badeaf39e2e16977a0c02fb92745", - "protein_translation": 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"ATGAATCAGTCGCTCACCCTTGCTTTTTTGATTGCCGCCGGAATTGGTCTGGTTGTCCAGAACACGCTGATGGTGCGCATCACCCAGACCTCCTCTACCATTCTCATCGCCATGTTGCTGAACTCACTGGTGGGGATTGTGCTCTTTGTTTCTATTTTATGGTTTAAACAAGGCATGGCGGGGTTTGGCGAACTGGTGTCCAGCGTGCGCTGGTGGACACTTATACCTGGCTTGCTGGGATCGTTTTTTGTCTTCGCCAGTATCAGCGGATATCAGAATGTGGGAGCGGCGACAACTATTGCTGTACTGGTCGCCAGTCAGCTGATTGGCGGTCTGATGCTGGATATCTTCCGCAGTCATGGCGTACCACTACGGGCGTTGTTCGGCCCAATTTGTGGCGCAATTTTACTTGTGGTTGGCGCCTGGTTGGTAGCCAGACGCTCATTTTAA", - "dna_sequence_length": 450, - "functions": [ - "DUF606 family inner membrane protein" - ], - "id": "CDS_1436", - "location": [ - [ - "NC_000913", - 1518331, - "-", - 450 - ] - ], - "md5": "bc1eeea2849b8415d587fd242d7c0457", - "parent_gene": "", - "protein_md5": "ea362bc405643937c211161733323f08", - "protein_translation": "MNQSLTLAFLIAAGIGLVVQNTLMVRITQTSSTILIAMLLNSLVGIVLFVSILWFKQGMAGFGELVSSVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAVLVASQLIGGLMLDIFRSHGVPLRALFGPICGAILLVVGAWLVARRSF", - "protein_translation_length": 149, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yncA" - ], - [ - "gene_synonym", - "JW5233" - ], - [ - "gene_synonym", - "ASAP:ABE-0004827" - ], - [ - "gene_synonym", - "b1448" - ], - [ - "gene_synonym", - "ECK1442" - ], - [ - "gene_synonym", - "GeneID:946010" - ], - [ - "gene_synonym", - "EcoGene:EG13770" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76112" - ], - [ - "gene_synonym", - "NP_415965.1" - ], - [ - "gene_synonym", - "GI:16129407" - ], - [ - "gene_synonym", - "mnaT" - ] - ], - "dna_sequence": "ATGTCCATCCGTTTTGCCCGCAAAGCCGACTGTGCTGCCATTGCGGAAATTTATAACCACGCCGTGTTGTATACGGCGGCTATCTGGAATGACCAAACGGTGGATGCTGATAACCGCATTGCCTGGTTTGAAGCGCGGACTTTAGCAGGTTATCCAGTGCTGGTGAGCGAGGAAAACGGCGTAGTGACGGGATATGCCTCGTTTGGCGACTGGCGTAGTTTCGATGGTTTTCGCCATACCGTGGAACATTCGGTTTATGTCCATCCCGATCATCAGGGCAAAGGTCTGGGGCGTAAATTGTTAAGCCGATTGATTGATGAAGCGCGGGATTGCGGGAAGCATGTCATGGTCGCCGGGATCGAATCGCAAAATCAGGCCTCGCTGCATCTCCACCAGTCGCTGGGATTTGTCGTCACCGCGCAAATGCCGCAGGTAGGCACTAAATTTGGTCGTTGGCTGGATCTGACATTTATGCAGTTGCAACTCGACGAGCGCACTGAACCGGACGCGATTGGATGA", - "dna_sequence_length": 519, - "functions": [ - "methionine N-acyltransferase", - "L-amino acid N-acyltransferase" - ], - "id": "CDS_1437", - "location": [ - [ - "NC_000913", - 1518846, - "-", - 519 - ] - ], - "md5": "a7f27af68bdc3df280a3c191e96bac89", - "parent_gene": "", - "protein_md5": "02f42b4dbeb72169c67d10f922543823", - "protein_translation": "MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFEARTLAGYPVLVSEENGVVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLSRLIDEARDCGKHVMVAGIESQNQASLHLHQSLGFVVTAQMPQVGTKFGRWLDLTFMQLQLDERTEPDAIG", - "protein_translation_length": 172, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yncB" - ], - [ - "gene_synonym", - "ECK1443" - ], - [ - "gene_synonym", - "b1449" - ], - [ - "gene_synonym", - "JW5907" - ], - [ - "gene_synonym", - "ASAP:ABE-0004834" - ], - [ - "gene_synonym", - "GI:226524714" - ], - [ - "gene_synonym", - "GeneID:946012" - ], - [ - "gene_synonym", - "EcoGene:EG13772" - ], - [ - "gene_synonym", - "curA" - ], - [ - "gene_synonym", - "NP_415966.6" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76113" - ] - ], - "dna_sequence": "ATGGGGCAACAAAAGCAGCGTAATCGACGTTGGGTTCTGGCCTCGCGTCCACATGGCGCACCTGTTCCGGAGAATTTCCGTCTTGAAGAAGATGATGTCGCCACACCGGGTGAAGGACAGGTGTTACTGCGCACAGTTTATTTGTCCCTGGACCCGTATATGCGTGGACGTATGAGCGATGAGCCATCTTATTCACCGCCTGTTGATATTGGCGGCGTGATGGTCGGCGGTACGGTGAGCCGTGTCGTGGAGTCGAATCATCCTGATTATCAGTCTGGCGACTGGGTGCTGGGCTACAGTGGATGGCAAGACTATGACATATCCAGTGGTGATGATCTGGTGAAACTTGGCGATCATCCGCAAAATCCATCGTGGTCGCTGGGTGTGCTAGGGATGCCAGGCTTTACCGCTTATATGGGCCTACTGGATATCGGTCAGCCTAAAGAGGGCGAAACGTTGGTGGTAGCTGCGGCGACAGGACCAGTGGGGGCGACGGTGGGGCAAATCGGCAAACTTAAAGGTTGCAGAGTGGTGGGGGTAGCCGGTGGCGCGGAAAAATGCCGCCATGCTACCGAGGTGTTAGGCTTCGATGTTTGTCTTGATCACCACGCGGATGATTTTGCCGAACAACTGGCGAAAGCGTGCCCAAAAGGTATTGATATCTATTATGAAAACGTGGGCGGTAAGGTATTCGATGCGGTGCTACCGTTACTTAATACATCTGCGCGCATTCCCGTCTGCGGATTAGTGAGCAGCTATAACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGAGATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAA", 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"GI:90111276" - ], - [ - "gene_synonym", - "EcoGene:EG13773" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76114" - ], - [ - "gene_synonym", - "NP_415967.2" - ], - [ - "gene_synonym", - "mcbR" - ], - [ - "gene_synonym", - "GeneID:946014" - ] - ], - "dna_sequence": "ATGCCTGGAACGGGAAAAATGAAACATGTCAGTTTGACTCTGCAGGTTGAGAACGACCTGAAACATCAGCTTAGTATTGGCGCATTAAAACCTGGCGCACGCCTGATTACTAAAAATCTGGCGGAGCAATTAGGTATGAGTATTACACCTGTGCGTGAAGCATTATTACGTCTGGTTTCGGTGAATGCGCTTTCTGTCGCACCTGCACAAGCATTTACAGTTCCGGAAGTGGGGAAACGTCAATTAGACGAAATCAATCGGATCCGCTACGAACTGGAATTAATGGCAGTTGCTCTGGCTGTTGAAAACCTCACCCCGCAAGACCTTGCGGAACTCCAGGAATTGCTCGAGAAATTACAGCAGGCGCAAGAAAAGGGCGACATGGAACAAATCATTAATGTAAACAGGCTATTTCGCTTAGCGATTTATCATCGCTCAAATATGCCCATCCTGTGTGAGATGATTGAGCAACTGTGGGTCAGGATGGGGCCTGGTTTACATTATCTCTATGAAGCGATTAATCCAGCGGAATTACGGGAGCATATAGAAAACTATCATCTGTTACTCGCTGCGTTAAAAGCAAAAGACAAAGAGGGATGCAGACATTGTCTTGCTGAAATTATGCAACAAAATATTGCTATTTTATACCAGCAATACAATCGTTAA", - "dna_sequence_length": 666, - "functions": [ - "colanic acid and biofilm gene transcriptional regulator, MqsR-controlled" - ], - "id": "CDS_1439", - "location": [ - [ - "NC_000913", - 1520262, - "+", - 666 - ] - ], - "md5": "3b4b4bfc86eaae5c5440e62dd34e173a", - "parent_gene": "", - "protein_md5": "f19f560a6118383b5f6b27ac4e6d867b", - "protein_translation": "MPGTGKMKHVSLTLQVENDLKHQLSIGALKPGARLITKNLAEQLGMSITPVREALLRLVSVNALSVAPAQAFTVPEVGKRQLDEINRIRYELELMAVALAVENLTPQDLAELQELLEKLQQAQEKGDMEQIINVNRLFRLAIYHRSNMPILCEMIEQLWVRMGPGLHYLYEAINPAELREHIENYHLLLAALKAKDKEGCRHCLAEIMQQNIAILYQQYNR", - "protein_translation_length": 221, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004839" - ], - [ - "gene_synonym", - "yncD" - ], - [ - "gene_synonym", - "b1451" - ], - [ - "gene_synonym", - "NP_415968.1" - ], - [ - "gene_synonym", - "GI:16129410" - ], - [ - "gene_synonym", - "JW1446" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76115" - ], - [ - "gene_synonym", - "EcoGene:EG13774" - ], - [ - "gene_synonym", - "GeneID:946015" - ], - [ - "gene_synonym", - "ECK1445" - ] - ], - "dna_sequence": "ATGAAGATTTTTTCCGTCCGACAGACCGTTTTGCCCGCACTGCTTGTCCTTTCCCCCGTTGTTTTTGCCGCTGATGAACAGACTATGATTGTCAGTGCCGCACCGCAGGTGGTTTCAGAACTGGATACCCCAGCAGCAGTAAGCGTGGTGGATGGCGAGGAGATGCGCCTGGCAACACCGCGCATTAACTTGTCCGAATCACTGACCGGCGTGCCTGGTTTGCAGGTACAAAACCGGCAGAACTATGCGCAAGATTTACAGCTGTCGATTCGCGGATTTGGCTCCCGCTCCACTTACGGTATTCGCGGTATTCGCCTGTATGTGGACGGTATTCCCGCCACCATGCCCGACGGGCAAGGGCAAACATCCAACATCGATTTAAGCAGTGTGCAAAATGTGGAAGTGCTGCGTGGCCCCTTCTCTGCCCTGTATGGCAACGCGTCTGGTGGGGTAATGAATGTCACCACCCAGACCGGACAACAGCCACCAACCATTGAAGCCAGTAGTTACTACGGCAGTTTTGGCAGCTGGCGCTATGGGCTGAAAGCAACGGGCGCAACGGGAGACGGCACACAGCCTGGCGATGTCGATTACACCGTCTCAACCACGCGTTTTACGACCCACGGCTATCGTGACCATAGTGGCGCACAGAAAAATTTAGCCAATGCCAAACTGGGCGTACGCATTGATGAAGCCAGCAAATTAAGTCTGATTTTCAATAGTGTGGATATCAAAGCAGATGACCCAGGTGGGCTAACCAAAGCAGAATGGAAGGCTAATCCACAACAAGCGCCTCGTGCAGAACAGTACGACACGCGAAAAACCATCAAGCAAACTCAGGCTGGGTTGCGCTATGAGCGTAGCCTGAGTTCGCGGGATGATATGAGTGTGATGATGTATGCCGGAGAGCGAGAAACGACCCAGTACCAGTCAATACCCATGGCACCACAACTTAACCCGTCACATGCGGGCGGCGTGATTACCCTGCAACGCCATTACCAGGGAATAGACAGCCGCTGGACACACCGTGGTGAACTGGGCGTTCCGGTCACGTTCACTACCGGCCTGAACTACGAAAACATGAGTGAAAACCGCAAGGGCTACAATAACTTCCGCCTGAATAGCGGCATGCCGGAGTACGGGCAAAAAGGTGAGTTGCGTCGCGACGAACGCAATCTGATGTGGAACATCGATCCCTATTTACAGACGCAGTGGCAGCTGAGCGAAAAACTGTCGCTGGATGCTGGCGTGCGCTACAGCTCCGTGTGGTTTGATTCCAACGACCATTACGTTACTCCGGGTAACGGCGATGACAGCGGTGATGCCAGTTATCATAAATGGCTACCTGCCGGTTCGTTAAAATATGCAATGACCGATGCCTGGAATATCTATCTGGCAGCCGGGCGAGGTTTTGAAACGCCGACGATTAATGAGCTGTCTTATCGTGCTGATGGGCAAAGCGGTATGAACTTAGGTTTAAAACCATCCACCAACGATACAATTGAGATCGGCAGTAAAACGCGTATTGGTGATGGGCTGCTTAGTCTCGCATTGTTTCAGACCGACACTGATGATGAAATTGTTGTCGATAGCAGTAGCGGTGGGCGTACGACTTACAAAAATGCCGGAAAGACCCGTCGTCAAGGCGCTGAACTGGCATGGGATCAACGTTTCGCAGGAGATTTTCGCGTAAACGCGTCCTGGACCTGGCTTGATGCGACCTATCGCAGCAATGTTTGCAATGAACAGGATTGTAACGGTAATCGGATGCCAGGGATCGCCCGTAATATGGGCTTTGCGTCGATAGGTTATGTACCGGAAGATGGTTGGTATGCAGGCACGGAAGCGCGTTATATGGGCGATATTATGGCAGATGATGAAAATACGGCAAAAGCGCCGTCTTATACTCTCGTCGGCTTATTCACCGGGTATAAATACAATTACCACAATTTAACTGTGGATTTATTTGGTCGTGTCGATAATTTATTCGATAAAGAATACGTTGGTTCTGTCATTGTCAATGAGTCAAACGGGCGATATTACGAACCTTCGCCCGGACGAAATTATGGTGTCGGCATGAATATTGCGTGGAGATTTGAGTAA", 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"MKIFSVRQTVLPALLVLSPVVFAADEQTMIVSAAPQVVSELDTPAAVSVVDGEEMRLATPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIRGIRLYVDGIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRYGLKATGATGDGTQPGDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTIKQTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQKGELRRDERNLMWNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNLGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEYVGSVIVNESNGRYYEPSPGRNYGVGMNIAWRFE", - "protein_translation_length": 700, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yncE" - ], - [ - "gene_synonym", - "GI:16129411" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76116" - ], - [ - "gene_synonym", - "ECK1446" - ], - [ - "gene_synonym", - "JW1447" - ], - [ - "gene_synonym", - "EcoGene:EG13775" - ], - [ - "gene_synonym", - "GeneID:946006" - ], - [ - "gene_synonym", - "NP_415969.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004843" - ], - [ - "gene_synonym", - "b1452" - ] - ], - "dna_sequence": "ATGCATTTACGTCATCTGTTTTCATCGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGTTTCATCATTCAGTACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCGGTAGGTAAAGGTGCCTACGAAATGGCTTATAGCCAGCAAGAAAACGCGCTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGTGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAAGTGACGCAGGCGATCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAACACCGTAAACAGCGCGGTCACGGCGATAGATGCCAAAACGGGCGAAGTGAAAGGCCGTCTGGTGCTGGATGATCGTAAGCGCACGGAAGAGGTGCGCCCGCTGCAACCGCGTGAGCTGGTAGCTGACGATGCCACGAACACCGTTTACATCAGTGGTATTGGTAAAGAGAGCGTGATTTGGGTCGTTGATGGCGGGAATATCAAACTGAAAACCGCCATCCAGAACACCGGTAAAATGAGTACCGGTCTGGCGCTGGATAGCGAAGGCAAACGTCTTTACACCACTAACGCTGACGGCGAATTGATTACCATCGACACCGCCGACAATAAAATCCTCAGCCGTAAAAAGCTGCTGGATGACGGCAAAGAGCACTTCTTTATCAACATTAGCCTTGATACCGCCAGGCAGCGTGCATTTATCACCGATTCTAAAGCCGCAGAAGTGTTAGTGGTCGATACCCGTAATGGCAATATTCTGGCGAAGGTTGCGGCACCGGAATCACTGGCTGTGCTGTTTAACCCCGCGCGTAATGAAGCCTACGTAACGCATCGTCAGGCAGGTAAAGTCAGTGTGATTGACGCGAAAAGCTATAAAGTGGTGAAAACGTTCGATACGCCGACTCATCCAAACAGCCTGGCGCTGTCTGCCGATGGCAAAACGCTGTATGTCAGTGTGAAACAAAAATCCACTAAACAGCAGGAAGCTACCCAGCCAGACGATGTGATTCGTATTGCGCTGTAA", - "dna_sequence_length": 1062, - "functions": [ - "ATP-binding protein, periplasmic, function unknown" - ], - "id": "CDS_1441", - "location": [ - [ - "NC_000913", - 1523307, - "+", - 1062 - ] - ], - "md5": "d8191a7355233d34cf2bc167d752c16c", - "parent_gene": "", - "protein_md5": "fd3ba7bceb467a0105a3d00a8dd4a8e9", - "protein_translation": "MHLRHLFSSRLRGSLLLGSLLVVSSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL", - "protein_translation_length": 353, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5234" - ], - [ - "gene_synonym", - "b1453" - ], - [ - "gene_synonym", - "yncF" - ], - [ - "gene_synonym", - "ansP" - ], - [ - "gene_synonym", - "ASAP:ABE-0004845" - ], - [ - "gene_synonym", - "ECK1447" - ], - [ - "gene_synonym", - "EcoGene:EG13776" - ], - [ - "gene_synonym", - "GI:90111277" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77610" - ], - [ - "gene_synonym", - "GeneID:946019" - ], - [ - "gene_synonym", - "NP_415970.4" - ] - ], - "dna_sequence": "ATGAGTAAACACGACACCGACACTTCAGATCAACACGCCGCGAAACGCCGCTGGCTTAATGCCCACGAAGAGGGGTATCACAAAGCGATGGGCAATCGCCAGGTGCAGATGATCGCCATTGGCGGCGCGATTGGCACCGGCTTGTTTTTAGGTGCAGGAGCCCGACTGCAAATGGCGGGGCCCGCACTGGCACTGGTTTATTTAATTTGTGGCTTGTTTTCGTTTTTTATTCTGCGTGCATTGGGTGAGCTGGTGCTACACCGCCCTTCCAGTGGCAGTTTTGTTTCTTATGCCCGTGAGTTTTTGGGTGAGAAAGCCGCTTATGTTGCTGGCTGGATGTACTTCATCAACTGGGCGATGACGGGGATTGTTGATATTACCGCCGTCGCTCTGTATATGCATTACTGGGGTGCGTTTGGCGGCGTGCCGCAGTGGGTCTTTGCGCTCGCTGCACTTACCATCGTTGGCACCATGAATATGATCGGTGTGAAATGGTTTGCGGAGATGGAGTTCTGGTTTGCGCTTATTAAAGTGCTCGCCATTGTGACCTTTTTGGTCGTGGGTACAGTGTTCCTCGGTAGTGGTCAGCCGCTGGATGGCAACACCACTGGCTTTCATTTAATCACCGATAATGGCGGCTTCTTCCCCCACGGTTTGCTGCCTGCGCTGGTGTTGATTCAGGGCGTAGTGTTTGCTTTTGCCTCCATTGAAATGGTGGGTACAGCTGCCGGAGAATGTAAAGATCCGCAGACCATGGTGCCTAAAGCCATTAACAGTGTGATTTGGCGTATTGGCCTGTTTTACGTCGGCTCCGTGGTGTTGCTGGTTATGTTATTGCCGTGGAGCGCGTATCAGGCGGGGCAAAGTCCGTTCGTGACGTTTTTCTCTAAACTGGGTGTGCCATATATCGGCAGCATTATGAACATTGTGGTGCTGACCGCTGCCCTCTCCAGCCTGAATTCAGGTCTGTACTGCACCGGACGTATTCTGCGCTCAATGGCGATGGGCGGTTCCGCACCGAGTTTTATGGCGAAAATGAGTCGTCAGCATGTGCCGTATGCCGGGATTCTGGCGACACTAGTTGTGTATGTCGTCGGCGTATTCCTCAACTATCTGGTGCCGTCGCGCGTATTTGAGATTGTGTTGAACTTCGCGTCGCTGGGAATCATCGCTTCATGGGCGTTTATCATCGTGTGCCAGATGCGCCTGCGTAAAGCGATTAAAGAAGGCAAAGCAGCGGATGTCAGTTTTAAACTGCCTGGCGCGCCCTTCACTTCCTGGCTGACATTACTGTTTTTACTGAGTGTCCTTGTGCTGATGGCGTTCGATTACCCGAACGGGACTTATACTATCGCGGCGCTGCCGATTATCGGTATTTTGCTGGTTATAGGCTGGTTTGGTGTGCGCAAACGCGTTGCTGAAATTCACAGCACTGCGCCAGTCGTCGAGGAAGATGAAGAAAAACAGGAAATTGTGTTTAAGCCTGAAACGGCGAGTTAA", 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"yncG" - ], - [ - "gene_synonym", - "GI:16129413" - ], - [ - "gene_synonym", - "GeneID:946023" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76117" - ], - [ - "gene_synonym", - "ASAP:ABE-0004851" - ], - [ - "gene_synonym", - "EcoGene:EG13777" - ], - [ - "gene_synonym", - "NP_415971.1" - ], - [ - "gene_synonym", - "b1454" - ] - ], - "dna_sequence": "ATGATTAAGGTGTATGGCGTACCCGGATGGGGCTCTACAATCAGTGAGCTGATGCTAACACTGGCTGATATTCCTTATCAGTTCGTTGATGTCAGTGGTTTTGACCACGAGGGAGCTTCACGCGAGTTATTGAAAACCCTGAACCCGTTGTGTCAGGTTCCGACACTGGCATTGGAAAATGACGAGATTATGACGGAGACAGCGGCGATTGCATTGATGGTTCTCGATCGTCGCCCGGACCTTGCGCCACCGGTTGGGCGCGCCGAACGTCAGCTGTTTCAACGGCTATTGGTCTGGCTGGTTGCTAATGTCTATCCAACATTCACTTTCGCCGATTACCCTGAGCGTTGGGCTCCTGACGCACCTGAACAGTTAAAGAAGAATGTTATTGAATATCGAAAATCGCTTTATATCTGGTTGAATTCGCAGCTCACTGCTGAACCTTATGCGTTTGGTGAGCAACTAACGCTGGTGGACTGTTATCTTTGCACTATGCGCACATGGGGGCCTGGGCATGAATGGTTTCAGGATAATGCCACGAATATCAGTGCGATTGCTGATGCTGTATGTCAGTTACCGAAATTACAAGAAGTATTAAAAAGGAATGAAATTATTTGA", - "dna_sequence_length": 618, - "functions": [ - "glutathione S-transferase homolog" - ], - "id": "CDS_1443", - "location": [ - [ - "NC_000913", - 1526247, - "+", - 618 - ] - ], - "md5": "fcd3dd9a0ffbffaef7e3201e47c48487", - "parent_gene": "", - "protein_md5": "62a116c748886d569474e10b9ee7385c", - "protein_translation": "MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGASRELLKTLNPLCQVPTLALENDEIMTETAAIALMVLDRRPDLAPPVGRAERQLFQRLLVWLVANVYPTFTFADYPERWAPDAPEQLKKNVIEYRKSLYIWLNSQLTAEPYAFGEQLTLVDCYLCTMRTWGPGHEWFQDNATNISAIADAVCQLPKLQEVLKRNEII", - "protein_translation_length": 205, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1455" - ], - [ - "gene_synonym", - "yncH" - ], - [ - "gene_synonym", - "ECK1449" - ], - [ - "gene_synonym", - "ASAP:ABE-0004855" - ], - [ - "gene_synonym", - "GeneID:946024" - ], - [ - "gene_synonym", - "JW5235" - ], - [ - "gene_synonym", - "GI:16129414" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76118" - ], - [ - "gene_synonym", - "NP_415972.1" - ], - [ - "gene_synonym", - "EcoGene:EG13778" - ] - ], - "dna_sequence": "ATGGTATGTTTTTTAATTTATATCACTCTCCTTTTCATTCAGCGTGTCTATTTCATTTCCTCTGAAAAGAAACTAACTATTCACATCGTGCAGATGTTTCAGTTGTTATCACAGGCATTCTATAATCTCAAAATGTTTTTAATGATGGATATGCTCGGAGTTGGAGATGCAATTAATATTAATACAAATAAAAATATCCGGCAGGTATGCTAA", - "dna_sequence_length": 213, - "functions": [ - "IPR020099 family protein" - ], - "id": "CDS_1444", - "location": [ - [ - "NC_000913", - 1526940, - "+", - 213 - ] - ], - "md5": "608865780c2c37fb1f94562a62e419b2", - "parent_gene": "", - "protein_md5": "c0602ba52776144c2bd3f8baa98182b5", - "protein_translation": "MVCFLIYITLLFIQRVYFISSEKKLTIHIVQMFQLLSQAFYNLKMFLMMDMLGVGDAININTNKNIRQVC", - "protein_translation_length": 70, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1456" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24211" - ], - [ - "gene_synonym", - "ECK1450" - ], - [ - "gene_synonym", - "ASAP:ABE-0004858" - ], - [ - "gene_synonym", - "GeneID:946026" - ], - [ - "gene_synonym", - "JW1451" - ], - [ - "gene_synonym", - "rhsE" - ], - [ - "gene_synonym", - "EcoGene:EG10010" - ] - ], - "dna_sequence": "TTAACCACCCTCAGCCATACCAGTGAAGGCCACCGCGTGTCGGTCCACTACGGCTATGACGATAAAGGCCGCCTGACCGGCGAACGCCAGACGGTGGAGAACCCGGAGACGGGGGAACTGCTGTGGCACCATGAGACCGGACATGCGTACAACGAACAGGGGCTGGCAAACCGCGTCACGCCGGACAGTCTGCCGCCGGTGGAGTGGCTGACCTACGGCAGCGGCTATCTTGCGGGCATGAAGCTGGGCGGGACGCCGCTGCTGGAGTTCACGCGCGACCGCCTGCACCGTGAGACGGTGCGCAGCTTCGGCAGCATGGCAGGCAGTAATGCCGCATATAAACTGACCAGCACATACACCCCCGCAGGCCAGTTACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGGATAACCGCATCGCGGAGGATGCGCACTATGTCTACCGCCACGATGAATACGGCAGGCTGACGGAGAAGACGGACCGCATCCCGGCGGGTGTGATACGGACGGACGACGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGCTGGGACGGAGACAGGCTGACGACGGTGCAGACTGACACCACACGTATCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATTTTTACCACTGCGACCACCGGGGCCTGCCGCTGGCGCTCATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCACCTGCACCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAGTCGGGGCTGTACTATAACCGTCACCGGCACTACGATCCGTTGCAGGGGCGGTATATCACCCCGGACCCGATTGGGTTGAGAGGTGGATGGAATATGTATCAGTATCCGTTGAATCCCATACAAGTGATAGACCCAATGGGGTTAGATGCGATTGAGAATATGACATCAGGTGGACTAATTTATGCCGTATCTGGTGTACCTGGATTGATTGCTGCAAACAGCATTACTAACAGTGCTTACCAGTTCGGTTATGATATGGATGCTATTGTTGGCGGAGCTCATAATGGGGCCGCCGATGCAATGAGACATTGTTACTTGATGTGTCGAATGACTAAGACATTTGGATCAACAATAGCTGACGTGATAGGTAAAAATCATGAGGCGGCAGGGGATAGACAAGGTCAGCCAGCTAAAGAAAGAATCATGGATCTTAAAAATAACACTGTCGGTATTGCTTGTGGCGATTTTTCTGCCAAATGTAGCGATGCATGTATTGAAAAATATAACACTGGGCAACTCTTCGGGTTAGATGGTATAAAAGCAGATAATCCAATAAAAGCAAAGCAAGGGAGTTCAGATGCTTCAAATTATTAG", 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}, - { - "aliases": [ - [ - "gene_synonym", - "b1457" - ], - [ - "gene_synonym", - "EcoGene:EG11760" - ], - [ - "gene_synonym", - "GeneID:946958" - ], - [ - "gene_synonym", - "ECK1451" - ], - [ - "gene_synonym", - "ydcD" - ], - [ - "gene_synonym", - "GI:16129416" - ], - [ - "gene_synonym", - "ASAP:ABE-0004861" - ], - [ - "gene_synonym", - "JW1452" - ], - [ - "gene_synonym", - "NP_415974.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31991" - ] - ], - "dna_sequence": "ATGCTTCAAATTATTAGAGGCAAACTTGTCATTTTTTTAATTACCCTTTGTTTATTTGTTGTTTACCTTGGGTTTGATAACAATTCAAATTCTGACATCGTATTTTATGGACATAAAACACCAAAGAGCGTTGAGATATATCTTTCTGAAAAAAATATTATTTATAAAATAATTAATGACCAAAAAATTAGTAGAGGGAATGGTCATTTTATAAGTATAATGGTTAATAATTACAGGACGCACTGTGGAGTGGTTGATATAAATCTTAATTTTTTCAATGATATTCTTTATAGCGTGCGATTAAAAAACATTAGTAAACTGGAGAATATGGAGTTCTGCGCTACAAAACAACGGGTGTATTTTAGTGATAAAAACAAGAAGGCTAGTTATAAAATAATTAATTATGGAGACTATTATGATGTTGATTATTATGATAACAATTTGAAAAATGAAGTTTTTGACTGGATTGGTAAATGGTCATAA", - "dna_sequence_length": 483, - "functions": [ - "putative immunity protein for RhsE" - ], - "id": "CDS_1446", - "location": [ - [ - "NC_000913", - 1529922, - "+", - 483 - ] - ], - "md5": "d24b5fd21a501f32612b7610bbed2fb8", - "parent_gene": "", - "protein_md5": "ba482d29dae3abea663e558976fa3975", - "protein_translation": "MLQIIRGKLVIFLITLCLFVVYLGFDNNSNSDIVFYGHKTPKSVEIYLSEKNIIYKIINDQKISRGNGHFISIMVNNYRTHCGVVDINLNFFNDILYSVRLKNISKLENMEFCATKQRVYFSDKNKKASYKIINYGDYYDVDYYDNNLKNEVFDWIGKWS", - "protein_translation_length": 160, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76119" - ], - [ - "gene_synonym", - "EcoGene:EG14258" - ], - [ - "gene_synonym", - "yncI" - ], - [ - "gene_synonym", - "ECK1452" - ], - [ - "gene_synonym", - "yncM" - ], - [ - "gene_synonym", - "b1459" - ], - [ - "gene_synonym", - "JW1453" - ], - [ - "gene_synonym", - "ASAP:ABE-0004865" - ], - [ - "gene_synonym", - "ASAP:ABE-0004868" - ], - [ - "gene_synonym", - "GeneID:945121" - ] - ], - "dna_sequence": "GTGAGTATTCAAAGTTTGCTTGATTATATTTCAGTGACCCCTGATATACGACAACAAGGAAAGGTTAAACATAAATTATCTGCTATTTTGTTTCTCACCGTATGTGCAGTAATTGCAGGTGCCGATGAGTGGCAGGAAATTGAAGATTTTGGACATGAAAGACTTGAATGGCTAAAGAAATATGGTGATTTTGATAATGGCATTCCGGTCGATGACACCATTGCACGCGTTGTGAGTAACATTGACAGTTTGGCCTTTGAAAAGATGTTTATTGAATGGATGCAGGAGTGCCATGAAATCACTGATGGTGAAATTATAGCAATAGATGGAAAGACCATAAGAGGCTCCTTTGATAAGGGAAAAAGAAAAGGAGCAATCCATATGGTGAGTGCATTCTCGAACGAAAATGGTGTTGTACTGGGGCAGGTGAAAACGGAAGCCAAAAGTAATGAGATTACAGCCATTCCAGAGTTGCTTAACCTACTGTATTTAAAGAAAAATTTGATAACCATTGATGCTATGGGCTGTCAGAAAGATATCGCTTCGAAGATCAAAGATAAAAAAGCAGATTATCTTCTGGCAGTAAAAGGCAATCAGGGGAAATTACATCATGCATTCGAGGAAAAATTTCCTGTAAATGTGTTTTCTAATTATAAAGGCGATTCGTTTAGTACGCAGGAGATAAGTCATGGAAGAAAAGAAACACGTTTGCATATTGTCAGTAACGTAACGCCTGAATTTTGTGATTTTGAATTCGAATGGAAGGGATTAAAAAAGCTTTGTGTAGCATTGTCATTCAGGCAGAAGAAAGAAGATAAATCAGCAGAAGGTGTAAGCATCCGATATTATATTTCATCAAAGGATATGGATGCTAAAGAATTTGCACATGCTATCAGAGCGCACTGGCTGATCGAGCACAGTCTTCATTGGGTGTTAGATGTAAAAATGAATGAAGATGCCAGCCGGATAAGAAGAGGAAACGCAGCCTAAATAATATCTGGAATAAAGAAGATGGCACTGAATTTATTAAGAGATTGCAAAGACATTAAGGGT", 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- "gene_synonym", - "ydcC" - ], - [ - "gene_synonym", - "JW1455" - ], - [ - "gene_synonym", - "ASAP:ABE-0004872" - ], - [ - "gene_synonym", - "b1460" - ] - ], - "dna_sequence": "ATGGAACTTAAAAAATTGATGGGACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAATGGAACATAAGTTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGCTGGGAAGATATAGAGGATTTTGGGGAAACACATCCCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGACACCATTGCCAGAGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCATTCTTATGATAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGAAATCTAATGAGATTACAGCTATCCCAGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGCGGTAAAAGGAAACCAGGGGCGGCTAAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGCGCATGACAGTTACGCAATGAGTGAAAAGAGTCACGGCAGAGAAGAAATCCGTCTTCATATTGTTTGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGGCTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCTCGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCAGAGAAGTTCGCCACAGCAATCCGAAACCACTGGCATGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTACCTGGCGTCAGTCCTTACGGGGAGCGGGCTTTCGTAA", 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"gene_synonym", - "ydcE" - ], - [ - "gene_synonym", - "ECK1455" - ], - [ - "gene_synonym", - "ASAP:ABE-0004875" - ], - [ - "gene_synonym", - "JW1456" - ], - [ - "gene_synonym", - "GI:16129420" - ], - [ - "gene_synonym", - "pptA" - ], - [ - "gene_synonym", - "b1461" - ] - ], - "dna_sequence": "ATGCCGCACATCGACATTAAATGTTTTCCGCGTGAACTGGACGAACAACAAAAAGCAGCACTTGCTGCAGATATTACCGACGTTATTATTCGTCATCTGAACAGTAAAGACAGTTCGATAAGCATTGCTCTACAGCAGATTCAACCAGAATCTTGGCAAGCTATCTGGGATGCCGAAATCGCGCCCCAAATGGAGGCTTTGATAAAGAAACCTGGTTATAGCATGAATGCTTAA", - "dna_sequence_length": 234, - "functions": [ - "4-oxalocrotonate tautomerase" - ], - "id": "CDS_1449", - "location": [ - [ - "NC_000913", - 1533052, - "+", - 234 - ] - ], - "md5": "93f8857830eabe5b174e86e37ae399fc", - "parent_gene": "", - "protein_md5": "f29a216ec3899ba1a9b4ab3e6e62ced1", - "protein_translation": "MPHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA", - "protein_translation_length": 77, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76121" - ], - [ - "gene_synonym", - "ECK1456" - ], - [ - "gene_synonym", - "JW1457" - ], - [ - "gene_synonym", - "ASAP:ABE-0004877" - ], - [ - "gene_synonym", - "GeneID:946192" - ], - [ - "gene_synonym", - "yddH" - ], - [ - "gene_synonym", - "b1462" - ], - [ - "gene_synonym", - "NP_415979.2" - ], - [ - "gene_synonym", - "GI:90111278" - ], - [ - "gene_synonym", - "EcoGene:EG13779" - ] - ], - "dna_sequence": "ATGAGCCGATTCATCCCCATAGAATTACACCATGCCAGCCGTCTGTTAAATCATGGCCCAACGGTCTTGATCACCAGTTTCGATGAGCAATCCCAGCGGCGTAACATTATGGCTGCAGCCTGGTCAATGCCGGTGGAGTTTGAACCTCCACGCGTGGCGATTGTGGTAGATAAATCGACATGGACCAGGGAGTTGATTGAACATAACGGTAAATTTGGCATCGTTATCCCGGGCGTTGCAGCAACTAACTGGACGTGGGCGGTGGGAAGTGTGTCGGGGCGTGATGAAGATAAATTTAATTGCTATGGCATTCCGGTTGTGAGAGGCCCGGTATTTGGTTTGCCTCTGGTCGAGGAAAAATGTCTGGCGTGGATGGAGTGTCGATTGCTACCTGCGACTTCTGCGCAAGAAGAATACGACACGCTGTTTGGCGAAGTAGTATCAGCAGCGGCAGACGCACGGGTATTTGTCGAAGGCCGCTGGCAGTTTGATGATGATAAGCTCAATACGTTGCATCATTTAGGTGCTGGGACGTTTGTTACCAGCGGCAAGCGTGTTACGGCGGGTTAA", - "dna_sequence_length": 570, - "functions": [ - "flavin reductase like-protein" - ], - "id": "CDS_1450", - "location": [ - [ - "NC_000913", - 1533851, - "-", - 570 - ] - ], - "md5": "14ffd62229aa814018c66ce134544db9", - "parent_gene": "", - "protein_md5": "b5799dae2c50efd7f74cb117ee504578", - "protein_translation": "MSRFIPIELHHASRLLNHGPTVLITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKSTWTRELIEHNGKFGIVIPGVAATNWTWAVGSVSGRDEDKFNCYGIPVVRGPVFGLPLVEEKCLAWMECRLLPATSAQEEYDTLFGEVVSAAADARVFVEGRWQFDDDKLNTLHHLGAGTFVTSGKRVTAG", - "protein_translation_length": 189, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129422" - ], - [ - "gene_synonym", - "GeneID:947251" - ], - [ - "gene_synonym", - "ECK1457" - ], - [ - "gene_synonym", - "EcoGene:EG13780" - ], - [ - "gene_synonym", - "yddI" - ], - [ - "gene_synonym", - "b1463" - ], - [ - "gene_synonym", - "NP_415980.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77567" - ], - [ - "gene_synonym", - "ASAP:ABE-0004882" - ], - [ - "gene_synonym", - "nhoA" - ], - [ - "gene_synonym", - "JW1458" - ] - ], - "dna_sequence": "ATGACGCCCATTCTGAATCACTATTTTGCCCGTATTAACTGGTCGGGAGCTGCTGCGGTCAATATTGATACGCTTCGTGCATTGCACCTGAAACACAATTGCACCATTCCGTTTGAAAACCTCGACGTTTTGCTGCCGAGGGAAATACAGCTTGATAATCAATCGCCGGAAGAGAAACTGGTGATAGCCCGTCGTGGCGGTTACTGTTTTGAGCAGAATGGCGTGTTTGAGCGGGTGTTACGCGAGCTGGGGTTTAACGTTCGCAGCTTGTTAGGGCGCGTAGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGATCTCGTGCAGACCACGCCACACGGAGAGTATCGGTTGTTGCAGGAGGGTGATGATTGGGTGTTGCAGTTTAATCATCATCAGCATTGGCAGTCGATGTACCGTTTTGATCTCTGCGAGCAGCAACAAAGCGATTATGTGATGGGCAATTTCTGGTCGGCGCACTGGCCGCAGTCGCATTTTCGCCATCATTTGCTGATGTGCCGCCATTTGCCGGACGGCGGCAAGCTGACACTGACCAATTTTCATTTTACCCATTATGAAAATGGGCACGCGGTGGAGCAGCGAAATCTACCGGATGTGGCGTCATTATATGCTGTGATGCAAGAACAGTTTGGTCTGGGCGTGGATGATGCGAAACATGGCTTTACCGTGGATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAA", - "dna_sequence_length": 846, - "functions": [ - "N-hydroxyarylamine O-acetyltransferase" - ], - "id": "CDS_1451", - "location": [ - [ - "NC_000913", - 1534024, - "+", - 846 - ] - ], - "md5": "d28ace5e194d27fb621c975b2c99e238", - "parent_gene": "", - "protein_md5": "c6b7e674fc75afa2015b74bd6183098c", - "protein_translation": "MTPILNHYFARINWSGAAAVNIDTLRALHLKHNCTIPFENLDVLLPREIQLDNQSPEEKLVIARRGGYCFEQNGVFERVLRELGFNVRSLLGRVVLSNPPALPPRTHRLLLVELEEEKWIADVGFGGQTLTAPIRLVSDLVQTTPHGEYRLLQEGDDWVLQFNHHQHWQSMYRFDLCEQQQSDYVMGNFWSAHWPQSHFRHHLLMCRHLPDGGKLTLTNFHFTHYENGHAVEQRNLPDVASLYAVMQEQFGLGVDDAKHGFTVDELALVMAAFDTHPEAGK", - "protein_translation_length": 281, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1458" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37757" - ], - [ - "gene_synonym", - "NP_415981.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004886" - ], - [ - "gene_synonym", - "GeneID:944782" - ], - [ - "gene_synonym", - "EcoGene:EG11825" - ], - [ - "gene_synonym", - "b1464" - ], - [ - "gene_synonym", - "GI:16129423" - ], - [ - "gene_synonym", - "yddE" - ], - [ - "gene_synonym", - "JW1459" - ] - ], - "dna_sequence": "ATGAAACCGCAGGTGTACCACGTCGATGCTTTTACCTCACAACCGTTTCGCGGCAATTCTGCCGGTGTTGTTTTCCCCGCCGATAATCTTAGCGAAGCGCAAATGCAGCTTATCGCCCGCGAGTTAGGCCATTCGGAAACTGCTTTTCTGCTGCACAGCGACGACAGCGATGTGCGCATCCGCTACTTTACGCCAACGGTTGAAGTGCCGATTTGCGGTCACGCGACAGTAGCTGCGCACTATGTACGTGCGAAGGTGTTAGGTTTAGGAAATTGCACGATCTGGCAAACATCGCTGGCAGGAAAACATCGCGTGACTATCGAAAAGCACAACGATGATTATCGTATTTCGCTGGAACAAGGTACGCCGGGCTTTGAGCCACCGCTGGAAGGTGAAACACGTGCGGCGATTATCAACGCGCTTCATCTCACTGAGGACGATATTCTGCCAGGCTTGCCAATTCAGGTGGCAACAACAGGACACTCAAAAGTGATGATCCCACTGAAACCGGAAGTGGATATCGACGCCCTTTCGCCTGACCTTAATGCGCTGACCGCTATCAGCAAAAAGATTGGCTGCAATGGTTTCTTCCCGTTCCAGATCCGCCCAGGCAAAAACGAAACCGATGGTCGCATGTTCTCGCCTGCGATTGGTATTGTGGAAGATCCGGTGACTGGCAATGCCAATGGCCCGATGGGTGCATGGTTGGTACATCACAACGTATTGCCCCACGATGGCAACGTGTTGCGTGTTAAAGGCCATCAGGGGCGCGCATTGGGGCGTGACGGTATGATTGAAGTGACGGTGACAATTCGTGATAACCAACCGGAAAAAGTCACCATTTCAGGCACAGCGGTGATTTTGTTTCATGCCGAATGGGCAATTGAACTCTGA", - "dna_sequence_length": 894, - "functions": [ - "PhzC-PhzF family protein" - ], - "id": "CDS_1452", - "location": [ - [ - "NC_000913", - 1535858, - "-", - 894 - ] - ], - "md5": "01c19cf69cdc82674acff42cc6625f66", - "parent_gene": "", - "protein_md5": "9aa2f18952604f703a94a86508ad54e1", - "protein_translation": "MKPQVYHVDAFTSQPFRGNSAGVVFPADNLSEAQMQLIARELGHSETAFLLHSDDSDVRIRYFTPTVEVPICGHATVAAHYVRAKVLGLGNCTIWQTSLAGKHRVTIEKHNDDYRISLEQGTPGFEPPLEGETRAAIINALHLTEDDILPGLPIQVATTGHSKVMIPLKPEVDIDALSPDLNALTAISKKIGCNGFFPFQIRPGKNETDGRMFSPAIGIVEDPVTGNANGPMGAWLVHHNVLPHDGNVLRVKGHQGRALGRDGMIEVTVTIRDNQPEKVTISGTAVILFHAEWAIEL", - "protein_translation_length": 297, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1459" - ], - [ - "gene_synonym", - "EcoGene:EG10644" - ], - [ - "gene_synonym", - "GeneID:946029" - ], - [ - "gene_synonym", - "NP_415982.1" - ], - [ - "gene_synonym", - "narV" - ], - [ - "gene_synonym", - "JW1460" - ], - [ - "gene_synonym", - "GI:16129424" - ], - [ - "gene_synonym", - "ASAP:ABE-0004889" - ], - [ - "gene_synonym", - "chlZ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF32" - ], - [ - "gene_synonym", - "b1465" - ] - ], - "dna_sequence": "ATGATTCAGTATCTGAACGTCTTTTTTTACGATATCTACCCGTACATTTGTGCGACGGTGTTTTTCCTCGGCAGCTGGCTGCGCTACGACTACGGGCAGTACACCTGGCGCGCCTCCTCAAGTCAAATGCTCGATAAACGCGGGATGGTGATATGGTCGAATCTGTTCCATATCGGCATTTTGGGGATTTTCTTCGGGCACTTGTTCGGCATGTTAACGCCGCACTGGATGTACGCGTGGTTTTTGCCAGTGGCAGCGAAACAACTCATGGCGATGGTGCTCGGCGGTATTTGCGGTGTGTTGACGTTGATTGGCGGCGCAGGACTGCTGTGGCGCAGGCTGACAAATCAGCGCGTGCGTGCCACTTCCACTACGCCGGATATCATCATCATGAGCATTTTGCTGATCCAGTGTCTGTTGGGGCTAAGTACCATACCGTTTTCAGCACAGTATCCTGATGGTAGCGAAATGATGAAGCTGGTGGGTTGGGCGCAAAGCATTGTCACTTTCCGTGGTGGATCGTCAGAGATGCTCAACGGCGTAGCGTTCGTCTTCCGCCTGCATCTGGTGTTGGGAATGACCATCTTCCTGCTCTTCCCGTTCACCCGACTGGTGCATGTGTGGAGCGCGCCGTTTGAGTACTTTACTCGTCGATATCAAATTGTGCGTTCGCGGCGATAA", - "dna_sequence_length": 681, - "functions": [ - "nitrate reductase 2 (NRZ), gamma subunit" - ], - "id": "CDS_1453", - "location": [ - [ - "NC_000913", - 1536617, - "-", - 681 - ] - ], - "md5": "c6ae74b258c07a88c5788d187cb7ff5a", - "parent_gene": "", - "protein_md5": "518d722229fa6ceeca377747352bdbd8", - "protein_translation": "MIQYLNVFFYDIYPYICATVFFLGSWLRYDYGQYTWRASSSQMLDKRGMVIWSNLFHIGILGIFFGHLFGMLTPHWMYAWFLPVAAKQLMAMVLGGICGVLTLIGGAGLLWRRLTNQRVRATSTTPDIIIMSILLIQCLLGLSTIPFSAQYPDGSEMMKLVGWAQSIVTFRGGSSEMLNGVAFVFRLHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRRYQIVRSRR", - "protein_translation_length": 226, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P19317" - ], - [ - "gene_synonym", - "EcoGene:EG10645" - ], - [ - "gene_synonym", - "narW" - ], - [ - "gene_synonym", - "GeneID:946032" - ], - [ - "gene_synonym", - "JW1461" - ], - [ - "gene_synonym", - "GI:16129425" - ], - [ - "gene_synonym", - "chlZ" - ], - [ - "gene_synonym", - "ECK1460" - ], - [ - "gene_synonym", - "ASAP:ABE-0004892" - ], - [ - "gene_synonym", - "b1466" - ], - [ - "gene_synonym", - "NP_415983.1" - ] - ], - "dna_sequence": "ATGCAGATCCTCAAAGTGATCGGCCTGTTGATGGAGTATCCGGACGAGCTGTTGTGGGAATGCAAGGAGGACGCGCTGGCGTTGATCCGCCGCGACGCGCCGATGCTTACGGATTTCACCCACAACCTGCTTAACGCGCCGCTGCTGGATAAACAGGCCGAATGGTGCGAAGTGTTTGACCGCGGGCGCACCACGTCGCTGCTGCTGTTCGAACATGTTCATGCCGAGTCCCGCGATCGCGGCCAGGCAATGGTGGACCTGCTGGCGGAGTATGAAAAGGTCGGCCTGCAGCTGGATTGTCGGGAACTGCCCGATTATCTACCGCTGTATCTGGAGTATTTAAGCGTACTGCCTGACGATCAGGCGAAAGAAGGATTGCTCAATGTTGCGCCGATCCTCGCCCTGCTTGGCGGTCGCTTAAAACAACGCGAGGCACCGTGGTACGCGTTGTTTGATGCTCTGCTGCAACTGGCGGGAAGCTCCCTTTCAAGTGACAGTGTCACAAAACAAGTAAACAGCGAAGAGCGCGATGACACCCGCCAGGCGCTTGATGCAGTGTGGGAAGAGGAACAGGTGAAGTTTATTGAAGATAACGCCACGGCGTGTGACAGCTCGCCGCTTAATCAATATCAGCGACGCTTTAGCCAGGATGTCGCGCCGCAATATGTCGACATCAGTGCGGGAGGTGGGAAATGA", - "dna_sequence_length": 696, - "functions": [ - "nitrate reductase 2 (NRZ), delta subunit (assembly subunit)" - ], - "id": "CDS_1454", - "location": [ - [ - "NC_000913", - 1537309, - "-", - 696 - ] - ], - "md5": "b568e63804e320d2aec7bc09cb1eabee", - "parent_gene": "", - "protein_md5": "81ceddaac98c865928b8e863f3bba063", - "protein_translation": "MQILKVIGLLMEYPDELLWECKEDALALIRRDAPMLTDFTHNLLNAPLLDKQAEWCEVFDRGRTTSLLLFEHVHAESRDRGQAMVDLLAEYEKVGLQLDCRELPDYLPLYLEYLSVLPDDQAKEGLLNVAPILALLGGRLKQREAPWYALFDALLQLAGSSLSSDSVTKQVNSEERDDTRQALDAVWEEEQVKFIEDNATACDSSPLNQYQRRFSQDVAPQYVDISAGGGK", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "narY" - ], - [ - "gene_synonym", - "EcoGene:EG10647" - ], - [ - "gene_synonym", - "NP_415984.1" - ], - [ - "gene_synonym", - "GeneID:946034" - ], - [ - "gene_synonym", - "JW1462" - ], - [ - "gene_synonym", - "ASAP:ABE-0004896" - ], - [ - "gene_synonym", - "GI:16129426" - ], - [ - "gene_synonym", - "chlZ" - ], - [ - "gene_synonym", - "ECK1461" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P19318" - ], - [ - "gene_synonym", - "b1467" - ] - ], - "dna_sequence": "ATGAAAATCCGTTCACAAGTCGGCATGGTGCTTAACCTCGACAAATGTATCGGCTGCCATACCTGTTCGGTGACCTGTAAAAACGTCTGGACCGGGCGCGAAGGCATGGAGTACGCATGGTTTAACAACGTCGAAACCAAACCGGGCATTGGTTATCCGAAAAACTGGGAAGATCAGGAAGAGTGGCAAGGCGGCTGGGTGCGTGATGTGAATGGCAAGATACGCCCGCGTCTGGGCAACAAGATGGGCGTAATAACCAAAATCTTCGCCAACCCGGTGGTGCCGCAGATTGATGATTACTACGAACCTTTCACCTTCGACTACGAACATTTGCATAGCGCACCGGAAGGCAAACATATTCCTACTGCTCGCCCGCGTTCACTGATTGACGGCAAACGGATGGACAAAGTGATCTGGGGGCCAAACTGGGAAGAACTGCTGGGCGGTGAGTTCGAAAAACGTGCCCGCGACCGCAACTTCGAGGCCATGCAAAAGGAGATGTACGGGCAGTTTGAAAACACCTTCATGATGTACCTGCCGCGCCTGTGCGAACACTGCCTCAATCCCAGCTGCGTGGCGACCTGCCCAAGCGGCGCTATCTACAAACGCGAAGAAGACGGCATTGTGCTGATTGATCAGGATAAATGCCGTGGCTGGCGTTTGTGCATAAGCGGTTGTCCGTACAAAAAAATCTACTTCAACTGGAAAAGCGGCAAGTCAGAAAAATGCATCTTCTGTTACCCACGAATTGAGTCCGGTCAACCGACCGTGTGCTCAGAAACCTGCGTGGGTCGCATCCGGTATCTGGGCGTGCTGCTTTACGACGCCGACCGCATCGAGGAAGCGGCGAGCACCGAGCGCGAAGTTGACCTCTATGAACGCCAGTGCGAAGTGTTCCTCGATCCACACGATCCCTCAGTGATCGAGGAAGCCCTGAAACAAGGTATTCCACAAAATGTGATTGACGCTGCCCAGCGTTCGCCAGTCTACAAAATGGCGATGGACTGGAAACTGGCACTACCGTTGCACCCTGAATACCGCACCCTGCCGATGGTCTGGTACGTTCCTCCGCTGTCACCGATTCAGTCCTACGCAGATGCGGGCGGTTTGCCGAAAAGCGAAGGCGTGCTGCCCGCCATCGAAAGCCTGCGTATTCCGGTGCAATATCTCGCCAATATGTTGAGTGCCGGCGATACCGGTCCGGTACTGCGGGCGCTGAAACGGATGATGGCGATGCGCCACTATATGCGTTCACAAACCGTGGAAGGCGTTACTGATACTCGTGCCATCGACGAAGTAGGCCTGAGCGTCGCCCAGGTCGAAGAGATGTATCGCTATCTCGCCATTGCCAACTATGAAGATCGTTTTGTTATCCCGACCAGCCATCGGGAAATGGCGGGCGATGCCTTCGCAGAACGCAACGGCTGCGGTTTTACCTTTGGCGACGGTTGCCACGGTTCGGACAGTAAATTCAACCTGTTCAACAGTAGCCGTATCGATGCCATCAACATCACCGAAGTGCGCGACAAAGCGGAGGGCGAATAA", - "dna_sequence_length": 1545, - "functions": [ - "nitrate reductase 2 (NRZ), beta subunit" - ], - "id": "CDS_1455", - "location": [ - [ - "NC_000913", - 1538853, - "-", - 1545 - ] - ], - "md5": "339c3f83181dd5613178f2227a823abf", - "parent_gene": "", - "protein_md5": "1c769a058f6972b9bc5b3f810a3ca296", - "protein_translation": "MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTGREGMEYAWFNNVETKPGIGYPKNWEDQEEWQGGWVRDVNGKIRPRLGNKMGVITKIFANPVVPQIDDYYEPFTFDYEHLHSAPEGKHIPTARPRSLIDGKRMDKVIWGPNWEELLGGEFEKRARDRNFEAMQKEMYGQFENTFMMYLPRLCEHCLNPSCVATCPSGAIYKREEDGIVLIDQDKCRGWRLCISGCPYKKIYFNWKSGKSEKCIFCYPRIESGQPTVCSETCVGRIRYLGVLLYDADRIEEAASTEREVDLYERQCEVFLDPHDPSVIEEALKQGIPQNVIDAAQRSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSPIQSYADAGGLPKSEGVLPAIESLRIPVQYLANMLSAGDTGPVLRALKRMMAMRHYMRSQTVEGVTDTRAIDEVGLSVAQVEEMYRYLAIANYEDRFVIPTSHREMAGDAFAERNGCGFTFGDGCHGSDSKFNLFNSSRIDAINITEVRDKAEGE", - "protein_translation_length": 514, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129427" - ], - [ - "gene_synonym", - "NP_415985.1" - ], - [ - "gene_synonym", - "GeneID:945999" - ], - [ - "gene_synonym", - "narZ" - ], - [ - "gene_synonym", - "EcoGene:EG10648" - ], - [ - "gene_synonym", - "JW1463" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P19319" - ], - [ - "gene_synonym", - "ASAP:ABE-0004898" - ], - [ - "gene_synonym", - "b1468" - ], - [ - "gene_synonym", - "chlZ" - ], - [ - "gene_synonym", - "ECK1462" - ] - ], - "dna_sequence": "ATGAGTAAACTTTTGGATCGCTTTCGCTACTTCAAACAAAAGGGCGAAACCTTTGCCGATGGTCACGGACAGGTGATGCATAGCAACCGCGACTGGGAGGACAGCTATCGCCAGCGTTGGCAGTTCGACAAAATCGTGCGTTCCACCCACGGTGTTAACTGTACAGGCTCCTGTAGCTGGAAAATCTACGTTAAAAATGGTCTGGTGACCTGGGAAATCCAACAGACCGACTACCCGCGCACTCGCCCTGACCTGCCCAATCATGAACCTCGCGGCTGCCCGCGTGGCGCAAGTTACTCCTGGTATCTTTACAGCGCTAACCGCCTGAAATACCCGCTCATTCGTAAACGACTGATTGAACTGTGGCGCGAAGCCCTCAAGCAACACAGCGATCCGGTACTGGCGTGGGCATCGATTATGAACGATCCGCAAAAGTGCCTGAGCTACAAACAAGTGCGTGGGCGCGGCGGGTTTATCCGCTCCAACTGGCAGGAACTAAACCAGCTGATTGCCGCCGCTAACGTCTGGACCATCAAAACCTACGGCCCGGATCGCGTTGCCGGTTTCTCGCCGATCCCGGCGATGTCGATGGTTTCTTACGCCGCCGGAACGCGTTATCTGTCGCTGCTTGGCGGCACCTGTTTAAGTTTCTACGACTGGTATTGCGACCTGCCGCCCGCCTCGCCGATGACCTGGGGCGAGCAAACCGACGTACCGGAATCTGCCGACTGGTATAACTCCAGCTACATCATCGCCTGGGGGTCTAACGTACCGCAGACACGTACGCCGGACGCCCACTTCTTTACCGAAGTACGCTACAAAGGCACTAAAACCATCGCCATTACCCCTGACTACTCTGAAGTGGCCAAATTGTGCGACCAGTGGCTGGCACCGAAACAAGGCACTGATAGCGCCCTGGCGATGGCAATGGGCCATGTGATTTTAAAAGAGTTTCATCTCGATAATCCCAGCGACTACTTTATCAACTACTGCCGCCGCTACAGCGACATGCCGATGCTGGTAATGCTGGAGCCTCGCGACGATGGTAGCTACGTTCCCGGGCGCATGATCCGCGCATCTGACCTGGTGGATGGACTGGGCGAAAGCAACAATCCGCAGTGGAAAACCGTAGCAGTTAATACCGCAGGTGAATTGGTAGTGCCGAACGGTTCGATTGGTTTCCGCTGGGGAGAAAAAGGCAAATGGAATCTGGAATCCATTGCCGCCGGTACGGAAACCGAATTGTCGTTAACCCTGCTCGGTCAACATGACGCTGTTGCAGGCGTGGCCTTCCCCTACTTTGGCGGCATTGAAAATCCGCATTTTCGCAGCGTAAAACACAATCCGGTGCTGGTGCGCCAATTGCCCGTTAAAAACCTGACGTTAGTCGATGGCAACACCTGTCCGGTGGTCAGCGTTTATGATTTGGTACTGGCGAATTACGGCCTCGATCGCGGGCTGGAAGATGAAAACAGTGCGAAAGATTACGCTGAAATCAAACCGTACACCCCAGCCTGGGGTGAGCAAATTACCGGCGTGCCGCGCCAGTATATTGAAACCATCGCCCGTGAATTTGCCGATACCGCCCATAAAACGCATGGGCGCTCGATGATTATCCTCGGCGCAGGTGTTAACCACTGGTATCACATGGACATGAACTACCGCGGGATGATCAATATGCTGATCTTCTGCGGTTGTGTCGGGCAAAGCGGTGGCGGCTGGGCACACTATGTCGGCCAGGAAAAACTGCGCCCACAAACCGGCTGGTTGCCACTGGCCTTTGCGCTCGACTGGAACCGACCACCGCGCCAAATGAACAGCACCTCGTTTTTCTACAATCATTCCAGCCAATGGCGCTATGAAAAAGTCTCTGCTCAGGAGTTACTTTCACCGCTCGCCGATGCCAGTAAGTACAGCGGTCATCTGATTGATTTCAACGTTCGCGCCGAACGTATGGGCTGGCTACCTTCTGCGCCGCAGCTGGGGCGTAACCCGCTCGGGATTAAAGCTGAAGCCGACAAGGCCGGATTATCCCCCACAGAATTTACCGCCCAGGCGCTGAAATCGGGCGATTTACGTATGGCCTGCGAACAACCAGATAGCAGCAGCAATCATCCGCGTAATTTGTTTGTCTGGCGCTCTAACCTGCTTGGCTCCTCCGGCAAAGGCCACGAGTATATGCAGAAGTATCTGCTGGGGACCGAAAGCGGGATTCAGGGCGAGGAACTCGGTGCCAGCGACGGGATCAAACCGGAAGAAGTCGAGTGGCAAACTGCAGCGATTGAAGGCAAGCTCGACCTGCTGGTGACGCTCGACTTCCGCATGTCCAGTACCTGCCTGTTCTCCGATATCGTTCTGCCCACCGCCACCTGGTACGAAAAAGACGATATGAACACCTCGGATATGCATCCGTTTATTCATCCGCTTTCTGCGGCGGTCGATCCGGCGTGGGAATCACGCAGCGACTGGGAAATCTACAAAGGTATCGCCAAAGCATTTTCGCAAGTGTGCGTGGGTCATCTTGGCAAAGAAACCGACGTGGTATTACAACCCCTACTGCATGACTCTCCGGCAGAGCTCTCACAGCCGTGTGAAGTGCTCGACTGGCGCAAAGGCGAATGCGATCTGATTCCAGGCAAAACCGCGCCGAATATTGTGGCGGTGGAGCGCGACTACCCTGCTACGTATGAACGCTTTACCTCGCTCGGGCCATTGATGGACAAACTTGGCAATGGCGGTAAAGGGATTTCGTGGAATACCCAGGATGAAATCGATTTCCTCGGCAAACTCAATTACACCAAGCGTGATGGCCCGGCACAGGGGCGTCCGCTGATTGACACCGCCATTGACGCTTCAGAAGTGATTCTGGCACTGGCACCGGAAACCAACGGTCATGTTGCAGTCAAAGCGTGGCAGGCGCTGGGCGAGATCACCGGGCGCGAACATACCCATCTGGCGCTGCACAAAGAGGACGAGAAGATTCGCTTTCGCGATATTCAGGCGCAGCCGCGTAAAATTATCTCCAGCCCCACCTGGTCCGGTCTGGAAAGCGATCACGTCTCCTATAACGCGGGATACACCAACGTTCATGAGTTAATTCCGTGGCGCACGCTGTCGGGACGCCAGCAGCTCTATCAGGATCATCCGTGGATGCGTGCTTTTGGTGAAAGCCTGGTGGCTTATCGCCCGCCTATCGACACCCGTAGCGTCAGTGAGATGCGCCAGATACCGCCAAACGGCTTCCCGGAAAAAGCACTTAACTTCCTGACGCCGCACCAGAAATGGGGCATTCACTCAACCTACAGTGAAAACCTGCTAATGCTGACGCTCTCTCGCGGTGGACCGATTGTCTGGATCAGCGAAACAGATGCCCGAGAACTGACCATTGTCGATAACGACTGGGTGGAAGTATTCAACGCCAACGGCGCGCTGACTGCCCGCGCGGTGGTCAGCCAACGTGTACCGCCGGGCATGACCATGATGTATCACGCCCAGGAACGCATTATGAATATTCCTGGTTCGGAAGTAACTGGCATGCGCGGCGGCATTCATAACTCGGTTACCCGCGTTTGCCCGAAACCAACGCATATGATTGGCGGTTACGCGCAGCTGGCCTGGGGCTTTAACTACTACGGCACCGTCGGATCGAACCGCGATGAGTTCATCATGATCCGCAAGATGAAGAACGTTAACTGGCTGGATGATGAAGGTCGCGATCAGGTACAGGAGGCGAAAAAATGA", - "dna_sequence_length": 3741, - "functions": [ - "nitrate reductase 2 (NRZ), alpha subunit" - ], - "id": "CDS_1456", - "location": [ - [ - "NC_000913", - 1542590, - "-", - 3741 - ] - ], - "md5": "92ecb3b24d3e1e5fc5b87ece23ed4532", - "parent_gene": "", - "protein_md5": "7a839c82814c9e723c9a5ca6d6674715", - "protein_translation": "MSKLLDRFRYFKQKGETFADGHGQVMHSNRDWEDSYRQRWQFDKIVRSTHGVNCTGSCSWKIYVKNGLVTWEIQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPLIRKRLIELWREALKQHSDPVLAWASIMNDPQKCLSYKQVRGRGGFIRSNWQELNQLIAAANVWTIKTYGPDRVAGFSPIPAMSMVSYAAGTRYLSLLGGTCLSFYDWYCDLPPASPMTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTIAITPDYSEVAKLCDQWLAPKQGTDSALAMAMGHVILKEFHLDNPSDYFINYCRRYSDMPMLVMLEPRDDGSYVPGRMIRASDLVDGLGESNNPQWKTVAVNTAGELVVPNGSIGFRWGEKGKWNLESIAAGTETELSLTLLGQHDAVAGVAFPYFGGIENPHFRSVKHNPVLVRQLPVKNLTLVDGNTCPVVSVYDLVLANYGLDRGLEDENSAKDYAEIKPYTPAWGEQITGVPRQYIETIAREFADTAHKTHGRSMIILGAGVNHWYHMDMNYRGMINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWLPLAFALDWNRPPRQMNSTSFFYNHSSQWRYEKVSAQELLSPLADASKYSGHLIDFNVRAERMGWLPSAPQLGRNPLGIKAEADKAGLSPTEFTAQALKSGDLRMACEQPDSSSNHPRNLFVWRSNLLGSSGKGHEYMQKYLLGTESGIQGEELGASDGIKPEEVEWQTAAIEGKLDLLVTLDFRMSSTCLFSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWESRSDWEIYKGIAKAFSQVCVGHLGKETDVVLQPLLHDSPAELSQPCEVLDWRKGECDLIPGKTAPNIVAVERDYPATYERFTSLGPLMDKLGNGGKGISWNTQDEIDFLGKLNYTKRDGPAQGRPLIDTAIDASEVILALAPETNGHVAVKAWQALGEITGREHTHLALHKEDEKIRFRDIQAQPRKIISSPTWSGLESDHVSYNAGYTNVHELIPWRTLSGRQQLYQDHPWMRAFGESLVAYRPPIDTRSVSEMRQIPPNGFPEKALNFLTPHQKWGIHSTYSENLLMLTLSRGGPIVWISETDARELTIVDNDWVEVFNANGALTARAVVSQRVPPGMTMMYHAQERIMNIPGSEVTGMRGGIHNSVTRVCPKPTHMIGGYAQLAWGFNYYGTVGSNRDEFIMIRKMKNVNWLDDEGRDQVQEAKK", - "protein_translation_length": 1246, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "narU" - ], - [ - "gene_synonym", - "JW1464" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37758" - ], - [ - "gene_synonym", - "GeneID:945799" - ], - [ - "gene_synonym", - "ASAP:ABE-0004901" - ], - [ - "gene_synonym", - "b1469" - ], - [ - "gene_synonym", - "NP_415986.1" - ], - [ - "gene_synonym", - "ECK1463" - ], - [ - "gene_synonym", - "EcoGene:EG12153" - ], - [ - "gene_synonym", - "yddF" - ], - [ - "gene_synonym", - "GI:16129428" - ] - ], - "dna_sequence": "ATGGCACTGCAAAATGAGAAAAATAGTCGTTATCTTTTGCGCGACTGGAAACCAGAAAATCCGGCCTTCTGGGAAAATAAAGGAAAACATATTGCTCGAAGAAATCTCTGGATATCAGTCAGTTGTCTACTTCTTGCCTTCTGTGTCTGGATGCTATTTAGCGCAGTTACCGTTAATCTCAATAAAATCGGTTTTAATTTTACTACCGATCAACTCTTTTTATTAACCGCATTACCCTCCGTTTCTGGCGCATTATTGCGTGTTCCCTACTCCTTTATGGTGCCTATATTCGGTGGACGCCGATGGACGGTTTTTAGTACTGCAATCCTGATTATTCCTTGCGTCTGGCTCGGAATTGCCGTGCAAAATCCGAATACTCCTTTTGGGATATTTATCGTTATCGCTTTGCTATGCGGTTTTGCAGGTGCAAACTTTGCTTCGAGCATGGGCAATATCAGTTTCTTCTTTCCAAAAGCCAAACAAGGGAGCGCTCTTGGGATTAATGGCGGATTAGGAAACTTAGGTGTAAGTGTAATGCAGCTGGTTGCACCGCTGGTCATTTTTGTACCTGTATTTGCCTTTCTCGGCGTCAATGGCGTACCGCAGGCCGACGGTTCGGTGATGTCGCTGGCGAATGCCGCATGGATTTGGGTACCGCTACTGGCGATTGCCACGATCGCCGCATGGTCAGGGATGAATGATATCGCCAGTTCACGCGCCTCAATTGCCGACCAGCTCCCTGTCTTACAACGCCTGCATCTCTGGCTGCTGAGCCTGCTTTACCTTGCCACCTTCGGTTCGTTTATCGGTTTTTCTGCGGGTTTTGCCATGCTGGCAAAAACCCAGTTCCCGGATGTGAATATTCTGCGCCTGGCGTTCTTTGGCCCATTTATCGGTGCCATCGCGCGGTCGGTTGGTGGTGCTATTTCCGATAAGTTCGGCGGCGTGCGGGTGACGTTGATCAACTTTATTTTTATGGCGATTTTCAGTGCCCTGCTGTTCCTTACCTTACCGGGCACAGGCTCCGGTAATTTCATCGCCTTTTACGCCGTATTTATGGGGCTGTTTCTGACTGCGGGTCTGGGAAGTGGTTCTACTTTCCAGATGATCGCCGTCATCTTTCGCCAGATAACCATTTATCGGGTAAAGATGAAAGGCGGTAGTGATGAGCAAGCTCATAAAGAAGCCGTCACCGAAACGGCGGCGGCTCTGGGCTTTATCTCAGCCATTGGCGCAGTGGGCGGCTTTTTTATTCCGCAGGCGTTTGGCATGTCGCTCAATATGACCGGCTCTCCGGTCGGCGCGATGAAAGTGTTTTTAATCTTCTACATCGTTTGTGTGCTGCTGACCTGGCTGGTTTATGGTCGGCGGAAGTTCAGCCAAAAATAA", - "dna_sequence_length": 1389, - "functions": [ - "nitrate/nitrite transporter" - ], - "id": "CDS_1457", - "location": [ - [ - "NC_000913", - 1544060, - "-", - 1389 - ] - ], - "md5": "e555c112604e4da00c83d689e53c0420", - "parent_gene": "", - "protein_md5": "908b8b0b1c34b7c629d23f7622923267", - "protein_translation": "MALQNEKNSRYLLRDWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAHKEAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRKFSQK", - "protein_translation_length": 462, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76123" - ], - [ - "gene_synonym", - "JW1467" - ], - [ - "gene_synonym", - "ASAP:ABE-0004906" - ], - [ - "gene_synonym", - "ECK1465" - ], - [ - "gene_synonym", - "EcoGene:EG13782" - ], - [ - "gene_synonym", - "GeneID:947312" - ], - [ - "gene_synonym", - "yddK" - ], - [ - "gene_synonym", - "yddJ" - ], - [ - "gene_synonym", - "b1471" - ] - ], - "dna_sequence": "ATGATCACTGACCTTATATTACACAATCATCCCAGGATGAAAACAATCACTTTAAACGACAACCATATTGCACATTTAAACGCCAAAAACACTACAAAACTGGAATATTTAAACTTAAGCAATAACAATTTACTGCCAACCAATGACATTGATCAACTAATATCATCAAAACATCTTTGGCATGTATTAGTTAACGGCATCAACAATGATCCACTTGCACAAATGCAGTACTGGACTGCAGTAAGAAATATAATTGATGACACTAATGAAGTGACCATTGATTTATCAGGACTTAATTTAACCACTCAACCACCAGGGCTGCAAAACTTCACATCTATCAATCTTGATAATAACCAATTCACACATTTTGATGCAACCAACTACGATAGACTCGTAAAGCTAAGTCTGAATAGTAATGCTCTTGAGTCAATAAATTTTCCTCAAGGCAGAAATGTAAGTATTACACATATATCTATGAATAATAATGCTCTCAGAAATATTGATATAGATAGGCTTTCATCAGTTACTTATTTTAGTGCGGCACATAATCAACTAGAGTTTGTGCAATTAGAATCTTGCGAATGGCTGCAATACCTGAATCTCAGCCATAATCAATTAACTGATATTGTTGCAGGTAATAAAAATGAACTCTTACTGCTGGATCTATCCCATAATAAACTAACAAGTTTACACAATGACTTATTTCCCAACTTGAATACGTTACTTATTAACAACAATTTGCTTTCTGAAATTAAAATATTCTATAGCAACTTCTGCAATGTTCAGACATTAAACGCTGCTAACAACCAGTTGAAATATATAAATCTTGATTTCCTGACTTATCTTCCATCTATCAAAAGTTTAAGACTGGACAATAATAAAATAACCCACATTGATACTAATAATACATCCGATATTGGAACTTTATTCCCCATAATAAAACAGAGCAAAAACTTAAATTTTTTAAATGTTTCTGGGAAGAACAATTGCCCTACTATGCAGCTCATGTTATTTAATTTGTTTTCCCCAGCACTTAAGCTTAATACTGGCCTGGCAATTCTTTCGCCTGGTGCATTTGAAGTTCACTCTGACGGAATAGATGTGGATAACGAATTGTTTCACTATCCTATTAAAAAAGCATATACCCCATATAATATACACACTTACAAGACAGAGGAAGTTGTAAACCAGATGAATATAAAAGTTAAAAACATGACCTTAGATGAAATAAACAATACTTACTGTAATAACGATTATTACAATCAGGCAATAAGAGAGGAACCGATAGACCTTCTGGACAGATCGTTTTCCTCCAGTTCATGGCCTTTTTAG", - "dna_sequence_length": 1332, - "id": "CDS_1458", - "location": [ - [ - "NC_000913", - 1545714, - "-", - 951 - ], - [ - "NC_000913", - 1544764, - "-", - 381 - ] - ], - "md5": "8249a0946e62e521439aed1358221b81", - "parent_gene": "", - "protein_md5": "620326537ad48b2937200ffca827c1ba", - "protein_translation": "MITDLILHNHPRMKTITLNDNHIAHLNAKNTTKLEYLNLSNNNLLPTNDIDQLISSKHLWHVLVNGINNDPLAQMQYWTAVRNIIDDTNEVTIDLSGLNLTTQPPGLQNFTSINLDNNQFTHFDATNYDRLVKLSLNSNALESINFPQGRNVSITHISMNNNALRNIDIDRLSSVTYFSAAHNQLEFVQLESCEWLQYLNLSHNQLTDIVAGNKNELLLLDLSHNKLTSLHNDLFPNLNTLLINNNLLSEIKIFYSNFCNVQTLNAANNQLKYINLDFLTYLPSIKSLRLDNNKITHIDTNNTSDIGTLFPIIKQSKNLNFLNVSGKNNCPTMQLMLFNLFSPALKLNTGLAILSPGAFEVHSDGIDVDNELFHYPIKKAYTPYNIHTYKTEEVVNQMNIKVKNMTLDEINNTYCNNDYYNQAIREEPIDLLDRSFSSSSWPF", - "protein_translation_length": 443, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945737" - ], - [ - "gene_synonym", - "JW1468" - ], - [ - "gene_synonym", - "ASAP:ABE-0004910" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77519" - ], - [ - "gene_synonym", - "ECK1466" - ], - [ - "gene_synonym", - "yddL" - ], - [ - "gene_synonym", - "EcoGene:EG13783" - ], - [ - "gene_synonym", - "b1472" - ] - ], - "dna_sequence": "ATGAAATTAAAAATAGTTGCGGTGGTTGTAACTGGTTTGTTAGCTGCGAACGTAGCACACGCTGCCGAAGTCTATAACAAGGATGGTAATAAACTCGACCTTTATGGCAAGGTTACCGCTCTACGTTATTTTACTGATGATAAGCGTGACGATGGTGATAAAACTTATGCCCGTCTCGGCTTTAAAGGAGAAACGCAAATCAATGATCAAATGATTGGTTTTGGTCACTGGGAATATGATTTTAAAGGCTATAACGATGAAGCCAACGGCTCGCGCGGC", - "dna_sequence_length": 279, - "id": "CDS_1459", - "location": [ - [ - "NC_000913", - 1546028, - "-", - 279 - ] - ], - "md5": "7325bf1fa1417c959cbaeb19f3356b14", - "parent_gene": "", - "protein_md5": "773e21d6b380b85e4008ca680e2939a2", - "protein_translation": "MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRG", - "protein_translation_length": 93, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0004912" - ], - [ - "gene_synonym", - "JW1469" - ], - [ - "gene_synonym", - "GeneID:945942" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46136" - ], - [ - "gene_synonym", - "GI:145698260" - ], - [ - "gene_synonym", - "ECK1467" - ], - [ - "gene_synonym", - "NP_415990.5" - ], - [ - "gene_synonym", - "yddG" - ], - [ - "gene_synonym", - "EcoGene:EG12713" - ], - [ - "gene_synonym", - "b1473" - ] - ], - "dna_sequence": "ATGACACGACAAAAAGCAACGCTCATAGGGCTGATAGCGATCGTCCTGTGGAGCACGATGGTAGGATTGATTCGCGGTGTCAGTGAGGGGCTCGGCCCGGTCGGCGGCGCAGCTGCTATCTATTCATTAAGCGGGCTGCTGTTAATCTTCACGGTTGGATTTCCGCGTATTCGGCAAATCCCGAAAGGCTATTTACTCGCCGGGAGTCTGTTATTCGTCAGCTATGAAATCTGTCTGGCGCTTTCCTTAGGGTATGCGGCGACCCATCATCAGGCGATTGAAGTGGGTATGGTGAACTATCTGTGGCCCAGCCTGACAATTCTCTTTGCCATTCTGTTTAATGGTCAGAAAACCAACTGGTTGATTGTACCTGGATTATTATTAGCCCTCGTCGGCGTCTGTTGGGTGTTAGGCGGTGACAATGGGTTACATTATGATGAAATCATCAATAATATCACCACCAGCCCATTGAGTTATTTCCTGGCGTTCATTGGTGCGTTTATCTGGGCAGCCTATTGCACAGTAACGAATAAATACGCACGCGGATTTAATGGAATTACCGTTTTTGTCCTGCTAACGGGAGCAAGTCTGTGGGTTTACTATTTTCTTACGCCACAACCAGAAATGATATTTAGCACGCCCGTCATGATTAAACTCATCTCTGCGGCATTTACCTTAGGATTTGCTTATGCTGCATGGAATGTCGGTATATTGCATGGCAATGTCACCATTATGGCGGTAGGTTCGTATTTTACGCCTGTACTTTCCTCAGCGCTTGCAGCCGTGCTGCTCAGCGCCCCGCTGTCGTTCTCGTTCTGGCAAGGCGCGCTGATGGTCTGCGGCGGTTCCCTGCTCTGCTGGCTGGCGACACGTCGTGGTTAA", - "dna_sequence_length": 882, - "functions": [ - "aromatic amino acid exporter" - ], - "id": "CDS_1460", - "location": [ - [ - "NC_000913", - 1547169, - "-", - 882 - ] - ], - "md5": "69627ca07c7de2265428a1351a409fdd", - "parent_gene": "", - "protein_md5": "28154e69030e06024ac836bbbd3203a5", - "protein_translation": "MTRQKATLIGLIAIVLWSTMVGLIRGVSEGLGPVGGAAAIYSLSGLLLIFTVGFPRIRQIPKGYLLAGSLLFVSYEICLALSLGYAATHHQAIEVGMVNYLWPSLTILFAILFNGQKTNWLIVPGLLLALVGVCWVLGGDNGLHYDEIINNITTSPLSYFLAFIGAFIWAAYCTVTNKYARGFNGITVFVLLTGASLWVYYFLTPQPEMIFSTPVMIKLISAAFTLGFAYAAWNVGILHGNVTIMAVGSYFTPVLSSALAAVLLSAPLSFSFWQGALMVCGGSLLCWLATRRG", - "protein_translation_length": 293, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11227" - ], - [ - "gene_synonym", - "ASAP:ABE-0004917" - ], - [ - "gene_synonym", - "fdnG" - ], - [ - "gene_synonym", - "GeneID:946035" - ], - [ - "gene_synonym", - "JW1470" - ], - [ - "gene_synonym", - "ECK1468" - ], - [ - "gene_synonym", - "GI:16129433" - ], - [ - "gene_synonym", - "NP_415991.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24183" - ], - [ - "gene_synonym", - "b1474" - ] - ], - "dna_sequence": "ATGGACGTCAGTCGCAGACAATTTTTTAAAATCTGCGCGGGCGGTATGGCTGGAACAACAGTAGCGGCATTGGGCTTTGCCCCGAAGCAAGCACTGGCTCAGGCGCGAAACTACAAATTATTACGCGCTAAAGAGATCCGTAACACCTGCACATACTGTTCCGTAGGTTGCGGGCTATTGATGTATAGCCTGGGTGATGGCGCAAAAAACGCCAGAGAAGCGATTTATCACATTGAAGGTGACCCGGATCATCCGGTAAGCCGTGGTGCGCTGTGCCCGAAAGGGGCCGGTTTGCTGGATTACGTCAACAGTGAAAACCGTCTGCGCTACCCGGAATATCGTGCGCCAGGTTCTGACAAATGGCAGCGCATTAGCTGGGAAGAAGCATTCTCCCGTATTGCGAAGCTGATGAAAGCTGACCGTGACGCTAACTTTATTGAAAAGAACGAGCAGGGCGTAACGGTAAACCGTTGGCTTTCTACCGGTATGCTGTGTGCCTCCGGTGCCAGCAACGAAACCGGGATGCTGACCCAGAAATTTGCCCGCTCCCTCGGGATGCTGGCGGTAGACAACCAGGCGCGCGTCTGACACGGACCAACGGTAGCAAGTCTTGCTCCAACATTTGGTCGCGGTGCGATGACCAACCACTGGGTGGATATCAAAAACGCTAACGTCGTGATGGTGATGGGCGGTAACGCTGCTGAAGCGCATCCCGTCGGTTTCCGCTGGGCGATGGAAGCGAAAAACAACAACGACGCAACCTTGATCGTTGTCGATCCCCGTTTTACGCGTACCGCTTCTGTGGCGGATATTTACGCGCCTATTCGTTCCGGTACGGACATTACGTTCCTGTCTGGCGTTTTGCGCTACCTGATCGAAAACAACAAAATCAACGCCGAATACGTTAAGCATTACACCAACGCCAGCCTGCTGGTGCGTGATGATTTTGCTTTCGAAGACGGTCTGTTCAGCGGCTACGACGCTGAAAAACGTCAATACGATAAATCGTCCTGGAACTATCAGCTCGATGAAAACGGCTATGCGAAACGCGATGAAACACTGACTCATCCGCGCTGTGTGTGGAACCTGCTGAAAGAGCACGTTTCCCGCTACACGCCGGACGTCGTTGAAAACATCTGCGGTACGCCAAAAGCCGACTTCCTGAAAGTGTGTGAAGTGCTGGCCTCCACCAGCGCACCGGATCGCACAACCACCTTCCTGTACGCGCTGGGCTGGACGCAGCACACTGTGGGTGCGCAGAACATCCGTACTATGGCGATGATCCAGTTGCTGCTCGGTAACATGGGTATGGCCGGTGGCGGCGTGAACGCATTGCGTGGTCACTCCAACATTCAGGGCTTGACTGACTTAGGCCTGCTCTCTACCAGCCTGCCAGGTTATCTGACGCTGCCGTCAGAAAAACAGGTTGATTTGCAGTCGTATCTGGAAGCGAACACGCCGAAAGCGACGCTGGCTGATCAGGTGAACTACTGGAGCAACTATCCGAAGTTCTTCGTTAGCCTGATGAAATCTTTCTATGGCGATGCCGCGCAGAAAGAGAACAACTGGGGCTATGACTGGCTGCCGAAGTGGGACCAGACCTACGACGTCATCAAGTATTTCAACATGATGGATGAAGGCAAAGTCACCGGTTATTTCTGCCAGGGCTTTAACCCGGTTGCGTCCTTCCCGGACAAAAACAAAGTGGTGAGCTGCCTGAGCAAGCTGAAGTACATGGTGGTTATCGATCCGCTGGTGACTGAAACCTCTACCTTCTGGCAGAACCACGGTGAGTCGAACGATGTCGATCCGGCGTCTATTCAGACTGAAGTATTCCGTCTGCCTTCGACCTGCTTTGCTGAAGAAGATGGTTCTATCGCTAACTCCGGTCGCTGGTTGCAGTGGCACTGGAAAGGTCAGGACGCGCCGGGCGAAGCGCGTAACGACGGTGAAATTCTGGCGGGTATCTACCATCATCTGCGCGAGCTGTACCAGTCCGAAGGTGGTAAAGGCGTAGAACCGCTGATGAAGATGAGCTGGAACTACAAGCAGCCGCACGAACCGCAATCTGACGAAGTGGCTAAAGAGAACAACGGCTACGCGCTGGAAGATCTCTATGACGCTAATGGCGTGCTTATTGCGAAGAAAGGTCAGTTGCTGAGTAGCTTTGCGCATCTGCGTGATGACGGTACAACCGCATCTTCTTGCTGGATCTACACCGGTAGCTGGACAGAGCAGGGCAACCAGATGGCTAACCGCGATAACTCCGACCCGTCCGGTCTGGGGAATACGCTGGGATGGGCCTGGGCGTGGCCGCTCAACCGTCGCGTGCTGTACAACCGTGCTTCGGCGGATATCAACGGTAAACCGTGGGATCCGAAACGGATGCTGATCCAGTGGAACGGCAGCAAGTGGACGGGTAACGATATTCCTGACTTCGGCAATGCCGCACCGGGTACGCCAACCGGGCCGTTTATCATGCAGCCGGAAGGGATGGGACGCCTGTTTGCCATCAACAAAATGGCGGAAGGTCCGTTCCCGGAACACTACGAGCCGATTGAAACGCCGCTGGGCACTAACCCGCTGCATCCGAACGTGGTGTCTAACCCGGTTGTTCGTCTGTATGAACAAGACGCGCTGCGGATGGGTAAAAAAGAGCAGTTCCCGTATGTGGGTACGACCTATCGTCTGACCGAGCACTTCCACACCTGGACCAAGCACGCATTGCTCAACGCAATTGCTCAGCCGGAACAGTTTGTGGAAATCAGCGAAACGCTGGCGGCGGCGAAAGGCATTAATAATGGCGATCGTGTCACTGTCTCCAGCAAGCGTGGCTTTATCCGCGCGGTGGCTGTGGTAACGCGTCGTCTGAAACCGCTGAATGTAAATGGTCAGCAGGTTGAAACGGTGGGTATTCCAATCCACTGGGGCTTTGAGGGTGTCGCGCGTAAAGGTTATATCGCTAACACTCTGACGCCGAATGTCGGTGATGCAAACTCGCAAACGCCGGAATATAAAGCGTTCTTAGTCAACATCGAGAAGGCGTAA", - "dna_sequence_length": 3048, - "functions": [ - "formate dehydrogenase-N, alpha subunit, nitrate-inducible" - ], - "id": "CDS_1461", - "location": [ - [ - "NC_000913", - 1547401, - "+", - 3048 - ] - ], - "md5": "9f61c5f831c360ff31136d293cf82532", - "parent_gene": "", - "protein_md5": "b4fa4490c1e393d6a31be1be2f0c41e3", - "protein_translation": "MDVSRRQFFKICAGGMAGTTVAALGFAPKQALAQARNYKLLRAKEIRNTCTYCSVGCGLLMYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYVNSENRLRYPEYRAPGSDKWQRISWEEAFSRIAKLMKADRDANFIEKNEQGVTVNRWLSTGMLCASGASNETGMLTQKFARSLGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWVDIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIYAPIRSGTDITFLSGVLRYLIENNKINAEYVKHYTNASLLVRDDFAFEDGLFSGYDAEKRQYDKSSWNYQLDENGYAKRDETLTHPRCVWNLLKEHVSRYTPDVVENICGTPKADFLKVCEVLASTSAPDRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSTSLPGYLTLPSEKQVDLQSYLEANTPKATLADQVNYWSNYPKFFVSLMKSFYGDAAQKENNWGYDWLPKWDQTYDVIKYFNMMDEGKVTGYFCQGFNPVASFPDKNKVVSCLSKLKYMVVIDPLVTETSTFWQNHGESNDVDPASIQTEVFRLPSTCFAEEDGSIANSGRWLQWHWKGQDAPGEARNDGEILAGIYHHLRELYQSEGGKGVEPLMKMSWNYKQPHEPQSDEVAKENNGYALEDLYDANGVLIAKKGQLLSSFAHLRDDGTTASSCWIYTGSWTEQGNQMANRDNSDPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDPKRMLIQWNGSKWTGNDIPDFGNAAPGTPTGPFIMQPEGMGRLFAINKMAEGPFPEHYEPIETPLGTNPLHPNVVSNPVVRLYEQDALRMGKKEQFPYVGTTYRLTEHFHTWTKHALLNAIAQPEQFVEISETLAAAKGINNGDRVTVSSKRGFIRAVAVVTRRLKPLNVNGQQVETVGIPIHWGFEGVARKGYIANTLTPNVGDANSQTPEYKAFLVNIEKA", - "protein_translation_length": 1015, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948794" - ], - [ - "gene_synonym", - "NP_415992.1" - ], - [ - "gene_synonym", - "fdnH" - ], - [ - "gene_synonym", - "b1475" - ], - [ - "gene_synonym", - "JW1471" - ], - [ - "gene_synonym", - "ASAP:ABE-0004919" - ], - [ - "gene_synonym", - "GI:16129434" - ], - [ - "gene_synonym", - "EcoGene:EG11228" - ], - [ - "gene_synonym", - "ECK1469" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAJ3" - ] - ], - "dna_sequence": "ATGGCTATGGAAACGCAGGACATTATCAAAAGGTCCGCAACTAACTCCATCACGCCGCCTTCTCAGGTGCGTGATTACAAAGCAGAAGTCGCAAAACTTATCGACGTTTCCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCGGAGTGGAACGACATCCGTGATGAAGTGGGGCACTGCGTCGGGGTTTACGATAACCCCGCCGATCTGAGCGCCAAGTCCTGGACGGTGATGCGCTTTAGCGAAACCGAACAGAACGGCAAGCTGGAGTGGCTGATCCGTAAAGACGGCTGTATGCACTGTGAAGATCCCGGCTGCCTGAAGGCGTGCCCGTCTGCTGGTGCAATCATTCAGTACGCTAACGGGATTGTCGATTTCCAGTCGGAAAACTGCATCGGCTGTGGTTACTGCATTGCCGGGTGTCCGTTTAATATTCCGCGCCTCAACAAAGAGGATAACCGGGTATATAAATGCACGCTCTGCGTCGATCGCGTCAGCGTCGGCCAGGAACCGGCTTGTGTGAAAACCTGTCCGACCGGGGCTATCCACTTCGGCACCAAGAAGGAGATGCTGGAGCTGGCGGAACAGCGCGTGGCGAAACTGAAAGCGCGTGGTTACGAACATGCTGGCGTCTACAACCCGGAAGGGGTCGGTGGTACGCACGTTATGTACGTGCTGCATCACGCCGATCAGCCGGAGCTGTATCACGGTCTGCCGAAAGATCCGAAGATCGACACCTCGGTAAGCCTGTGGAAAGGCGCGTTGAAACCGCTGGCAGCGGCTGGCTTTATTGCCACTTTTGCCGGGTTGATTTTCCACTACATCGGTATTGGCCCGAATAAGGAAGTGGACGATGACGAGGAGGATCATCATGAGTAA", - "dna_sequence_length": 885, - "functions": [ - "formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible" - ], - "id": "CDS_1462", - "location": [ - [ - "NC_000913", - 1550461, - "+", - 885 - ] - ], - "md5": "aeada6079e6f5e12c37b3f59c09f826c", - "parent_gene": "", - "protein_md5": "75cef5c27f840a1ec1b9d27616b76458", - "protein_translation": "MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKACQVACSEWNDIRDEVGHCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPEGVGGTHVMYVLHHADQPELYHGLPKDPKIDTSVSLWKGALKPLAAAGFIATFAGLIFHYIGIGPNKEVDDDEEDHHE", - "protein_translation_length": 294, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEK7" - ], - [ - "gene_synonym", - "ASAP:ABE-0004921" - ], - [ - "gene_synonym", - "NP_415993.1" - ], - [ - "gene_synonym", - "GeneID:946038" - ], - [ - "gene_synonym", - "fdnI" - ], - [ - "gene_synonym", - "GI:16129435" - ], - [ - "gene_synonym", - "EcoGene:EG11229" - ], - [ - "gene_synonym", - "JW1472" - ], - [ - "gene_synonym", - "ECK1470" - ], - [ - "gene_synonym", - "b1476" - ] - ], - "dna_sequence": "ATGAGTAAGTCGAAAATGATTGTGCGCACCAAATTTATTGATCGCGCCTGTCACTGGACCGTGGTGATTTGCTTCTTCCTGGTGGCGCTGTCCGGGATTTCGTTCTTCTTCCCGACGCTGCAATGGCTGACGCAAACCTTCGGTACGCCGCAGATGGGACGCATTTTGCACCCGTTCTTCGGCATTGCGATTTTCGTCGCACTGATGTTTATGTTTGTGCGTTTTGTGCATCACAACATCCCGGATAAGAAAGATATTCCGTGGCTGTTGAACATTGTCGAAGTATTGAAAGGCAATGAGCATAAAGTGGCGGATGTCGGTAAGTACAACGCCGGGCAAAAGATGATGTTCTGGTCGATCATGAGCATGATTTTCGTGCTGCTGGTGACCGGGGTGATTATCTGGCGTCCGTACTTTGCGCAGTACTTCCCGATGCAGGTTGTTCGCTACAGCCTGCTGATCCACGCGGCTGCGGGTATCATCCTGATCCACGCCATCCTGATCCATATGTATATGGCATTTTGGGTGAAAGGATCGATTAAAGGGATGATCGAAGGGAAGGTAAGTCGTCGCTGGGCGAAGAAACACCATCCGCGCTGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAA", - "dna_sequence_length": 654, - "functions": [ - "formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible" - ], - "id": "CDS_1463", - "location": [ - [ - "NC_000913", - 1551338, - "+", - 654 - ] - ], - "md5": "ae925f781542f62e0289ab620afba05e", - "parent_gene": "", - "protein_md5": "0ef5fe073a18ffe29165fe9bf865a23a", - "protein_translation": "MSKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI", - "protein_translation_length": 217, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:145698261" - ], - [ - "gene_synonym", - "JW5908" - ], - [ - "gene_synonym", - "ASAP:ABE-0004925" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67699" - ], - [ - "gene_synonym", - "NP_415994.4" - ], - [ - "gene_synonym", - "yddM" - ], - [ - "gene_synonym", - "ECK1471" - ], - [ - "gene_synonym", - "EcoGene:EG13784" - ], - [ - "gene_synonym", - "GeneID:946040" - ], - [ - "gene_synonym", - "b1477" - ] - ], - "dna_sequence": "ATGAAAATGGCCAATCATCCCCGCCCGGGGGACATTATTCAGGAATCACTGGACGAACTTAATGTCAGCCTGCGCGAGTTTGCCAGAGCAATGGAAATTGCTCCCTCAACGGCAAGCCGATTGCTGACAGGAAAAGCAGCTTTGACGCCAGAAATGGCGATTAAACTTTCCGTGGTGATCGGCAGTTCGCCGCAAATGTGGCTGAATCTGCAAAACGCCTGGAGTCTGGCAGAGGCAGAAAAAACAGTGGATGTGTCGCGATTACGCCGTCTGGTTACGCAATAA", - "dna_sequence_length": 285, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_1464", - "location": [ - [ - "NC_000913", - 1552682, - "-", - 285 - ] - ], - "md5": "da7fa3e7717d9df049dca27a6e7b1ce9", - "parent_gene": "", - "protein_md5": "4f56ef81d6622cc1f5000ca16467b31d", - "protein_translation": "MKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTGKAALTPEMAIKLSVVIGSSPQMWLNLQNAWSLAEAEKTVDVSRLRRLVTQ", - "protein_translation_length": 94, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "adhP" - ], - [ - "gene_synonym", - "GI:90111280" - ], - [ - "gene_synonym", - "yddN" - ], - [ - "gene_synonym", - "JW1474" - ], - [ - "gene_synonym", - "ASAP:ABE-0004928" - ], - [ - "gene_synonym", - "EcoGene:EG12622" - ], - [ - "gene_synonym", - "NP_415995.4" - ], - [ - "gene_synonym", - "ECK1472" - ], - [ - "gene_synonym", - "b1478" - ], - [ - "gene_synonym", - "GeneID:946036" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39451" - ] - ], - "dna_sequence": "ATGAAGGCTGCAGTTGTTACGAAGGATCATCATGTTGACGTTACGTATAAAACACTGCGCTCACTGAAACATGGCGAAGCCCTGCTGAAAATGGAGTGTTGTGGTGTATGTCATACCGATCTTCATGTTAAGAATGGCGATTTTGGTGACAAAACCGGCGTAATTCTGGGCCATGAAGGCATCGGTGTGGTGGCAGAAGTGGGTCCAGGTGTCACCTCATTAAAACCAGGCGATCGTGCCAGCGTGGCGTGGTTCTACGAAGGATGCGGTCATTGCGAATACTGTAACAGTGGTAACGAAACGCTCTGCCGTTCAGTTAAAAATGCCGGATACAGCGTTGATGGCGGGATGGCGGAAGAGTGCATCGTGGTCGCCGATTACGCGGTAAAAGTGCCAGATGGTCTGGACTCGGCGGCGGCCAGCAGCATTACCTGTGCGGGAGTCACCACCTACAAAGCCGTTAAGCTGTCAAAAATTCGTCCAGGGCAGTGGATTGCTATCTACGGTCTTGGCGGTCTGGGTAACCTCGCCCTGCAATACGCGAAGAATGTCTTTAACGCCAAAGTGATCGCCATTGATGTCAATGATGAGCAGTTAAAACTGGCAACCGAAATGGGCGCAGATTTAGCGATTAACTCACACACCGAAGACGCCGCCAAAATTGTGCAGGAGAAAACTGGTGGCGCTCACGCTGCGGTGGTAACAGCGGTAGCTAAAGCTGCGTTTAACTCGGCAGTTGATGCTGTCCGTGCAGGCGGTCGTGTTGTGGCTGTCGGTCTACCGCCGGAGTCTATGAGCCTGGATATCCCACGTCTTGTGCTGGATGGTATTGAAGTGGTCGGTTCGCTGGTCGGCACGCGCCAGGATTTAACTGAAGCCTTCCAGTTTGCCGCCGAAGGTAAAGTGGTGCCGAAAGTCGCCCTGCGTCCGTTAGCGGACATCAACACCATCTTTACTGAGATGGAAGAAGGCAAAATCCGTGGCCGCATGGTGATTGATTTCCGTCACTAA", 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"b1479" - ], - [ - "gene_synonym", - "ECK1473" - ], - [ - "gene_synonym", - "EcoGene:EG10948" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P26616" - ], - [ - "gene_synonym", - "GI:90111281" - ], - [ - "gene_synonym", - "sfcA" - ] - ], - "dna_sequence": "ATGGAACCAAAAACAAAAAAACAGCGTTCGCTTTATATCCCTTACGCTGGCCCTGTACTGCTGGAATTTCCGTTGTTGAATAAAGGCAGTGCCTTCAGCATGGAAGAACGCCGTAACTTCAACCTGCTGGGGTTACTGCCGGAAGTGGTCGAAACCATCGAAGAACAAGCGGAACGAGCATGGATCCAGTATCAGGGATTCAAAACCGAAATCGACAAACACATCTACCTGCGTAACATCCAGGACACTAACGAAACCCTCTTCTACCGTCTGGTAAACAATCATCTTGATGAGATGATGCCTGTTATTTATACCCCAACCGTCGGCGCAGCCTGTGAGCGTTTTTCTGAGATCTACCGCCGTTCACGCGGCGTGTTTATCTCTTACCAGAACCGGCACAATATGGACGATATTCTGCAAAACGTGCCGAACCATAATATTAAAGTGATTGTGGTGACTGACGGTGAACGCATTCTGGGGCTTGGTGACCAGGGCATCGGCGGGATGGGCATTCCGATCGGTAAACTGTCGCTCTATACCGCCTGTGGCGGCATCAGCCCGGCGTATACCCTTCCGGTGGTGCTGGATGTCGGAACGAACAACCAACAGCTGCTTAACGATCCGCTGTATATGGGCTGGCGTAATCCGCGTATCACTGACGACGAATACTATGAATTCGTTGATGAATTTATCCAGGCTGTGAAACAACGCTGGCCAGACGTGCTGTTGCAGTTTGAAGACTTTGCTCAAAAAAATGCGATGCCGTTACTTAACCGCTATCGCAATGAAATTTGTTCTTTTAACGATGACATTCAGGGCACTGCGGCGGTAACAGTCGGCACACTGATCGCAGCAAGCCGCGCGGCAGGTGGTCAGTTAAGCGAGAAAAAAATCGTCTTCCTTGGCGCAGGTTCAGCGGGATGCGGCATTGCCGAAATGATCATCTCCCAGACCCAGCGCGAAGGATTAAGCGAGGAAGCGGCGCGGCAGAAAGTCTTTATGGTCGATCGCTTTGGCTTGCTGACTGACAAGATGCCGAACCTGCTGCCTTTCCAGACCAAACTGGTGCAGAAGCGCGAAAACCTCAGTGACTGGGATACCGACAGCGATGTGCTGTCACTGCTGGATGTGGTGCGCAATGTAAAACCAGATATTCTGATTGGCGTCTCAGGACAGACCGGGCTGTTTACGGAAGAGATCATCCGTGAGATGCATAAACACTGTCCGCGTCCGATCGTGATGCCGCTGTCTAACCCGACGTCACGCGTGGAAGCCACACCGCAGGACATTATCGCCTGGACCGAAGGTAACGCGCTGGTCGCCACGGGCAGCCCGTTTAATCCAGTGGTATGGAAAGATAAAATCTACCCTATCGCCCAGTGTAACAACGCCTTTATTTTCCCGGGCATCGGCCTGGGTGTTATTGCTTCCGGCGCGTCACGTATCACCGATGAGATGCTGATGTCGGCAAGTGAAACGCTGGCGCAGTATTCACCATTGGTGCTGAACGGCGAAGGTATGGTACTGCCGGAACTGAAAGATATTCAGAAAGTCTCCCGCGCAATTGCGTTTGCGGTTGGCAAAATGGCGCAGCAGCAAGGCGTGGCGGTGAAAACCTCTGCCGAAGCCCTGCAACAGGCCATTGACGATAATTTCTGGCAAGCCGAATACCGCGACTACCGCCGTACCTCCATCTAA", 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"aliases": [ - [ - "gene_synonym", - "sra" - ], - [ - "gene_synonym", - "ASAP:ABE-0004935" - ], - [ - "gene_synonym", - "EcoGene:EG11508" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68191" - ], - [ - "gene_synonym", - "GeneID:946030" - ], - [ - "gene_synonym", - "rpsV" - ], - [ - "gene_synonym", - "b1480" - ], - [ - "gene_synonym", - "ECK1474" - ], - [ - "gene_synonym", - "JW5962" - ], - [ - "gene_synonym", - "NP_415997.1" - ], - [ - "gene_synonym", - "GI:16129439" - ] - ], - "dna_sequence": "ATGAAATCGAACCGTCAGGCACGTCATATTCTTGGACTGGACCATAAAATTTCTAACCAGCGCAAAATAGTTACCGAAGGTGACAAATCCAGCGTAGTAAATAACCCAACCGGCAGAAAACGCCCCGCTGAAAAGTAA", - "dna_sequence_length": 138, - "functions": [ - "stationary-phase-induced ribosome-associated protein" - ], - "id": "CDS_1467", - "location": [ - [ - "NC_000913", - 1555963, - "-", - 138 - ] - ], - "md5": "8df09d5cbb5ec1ba2d656488339594d9", - "parent_gene": "", - "protein_md5": "ce57e563d2a484e580c09854d14c2e25", - "protein_translation": "MKSNRQARHILGLDHKISNQRKIVTEGDKSSVVNNPTGRKRPAEK", - "protein_translation_length": 45, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yddX" - ], - [ - "gene_synonym", - "bdm" - ], - [ - "gene_synonym", - "GI:90111282" - ], - [ - "gene_synonym", - "NP_415998.4" - ], - [ - "gene_synonym", - "JW5239" - ], - [ - "gene_synonym", - "ASAP:ABE-0004938" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76127" - ], - [ - "gene_synonym", - "b1481" - ], - [ - "gene_synonym", - "ECK1475" - ], - [ - "gene_synonym", - "EcoGene:EG14301" - ], - [ - "gene_synonym", - "GeneID:946041" - ] - ], - "dna_sequence": "ATGTTTACTTATTATCAGGCAGAAAATTCAACAGCAGAACCCGCTCTGGTTAATGCCATTGAGCAAGGCCTTCGGGCACAGCATGGTGTTGTCACTGAAGATGACATTCTCATGGAGCTGACCAAATGGGTTGAAGCTTCTGATAACGACATCCTCAGTGATATCTACCAGCAAACGATCAATTATGTGGTCAGTGGCCAGCACCCTACGCTTTAA", - "dna_sequence_length": 216, - "functions": [ - "biofilm-dependent modulation protein" - ], - "id": "CDS_1468", - "location": [ - [ - "NC_000913", - 1556280, - "-", - 216 - ] - ], - "md5": "ab0e8995595f2dd87c0023587ac009cb", - "parent_gene": "", - "protein_md5": "c2d2eec3f1fda1f562f4e4bd17649b15", - "protein_translation": "MFTYYQAENSTAEPALVNAIEQGLRAQHGVVTEDDILMELTKWVEASDNDILSDIYQQTINYVVSGQHPTL", - "protein_translation_length": 71, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "osmC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C0L2" - ], - [ - "gene_synonym", - "EcoGene:EG10680" - ], - [ - "gene_synonym", - "JW1477" - ], - [ - "gene_synonym", - "NP_415999.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004944" - ], - [ - "gene_synonym", - "GI:16129441" - ], - [ - "gene_synonym", - "ECK1476" - ], - [ - "gene_synonym", - "b1482" - ], - [ - "gene_synonym", - "GeneID:946043" - ] - ], - "dna_sequence": "ATGACAATCCATAAGAAAGGTCAGGCACACTGGGAAGGCGATATCAAACGCGGGAAGGGAACAGTATCCACCGAGAGTGGCGTGCTGAACCAACAGCCGTATGGATTTAACACGCGTTTTGAAGGCGAAAAAGGAACCAACCCTGAAGAACTGATTGGCGCAGCGCATGCCGCATGTTTCTCAATGGCGCTTTCATTAATGCTGGGGGAAGCGGGATTCACGCCAACATCGATTGATACCACCGCCGATGTGTCGCTGGATAAAGTGGATGCCGGTTTTGCGATTACGAAAATCGCACTGAAGAGTGAAGTTGCGGTGCCGGGTATTGATGCCTCTACCTTTGACGGCATAATCCAGAAAGCAAAAGCAGGATGCCCGGTCTCTCAGGTACTGAAAGCGGAAATTACGCTGGATTACCAGTTGAAATCGTAA", - "dna_sequence_length": 432, - "functions": [ - "lipoyl-dependent Cys-based peroxidase, hydroperoxide resistance", - "salt-shock inducible membrane protein", - "peroxiredoxin" - ], - "id": "CDS_1469", - "location": [ - [ - "NC_000913", - 1556625, - "+", - 432 - ] - ], - "md5": "837eb6bd588c8ba30cc2a6dfe99bfabc", - "parent_gene": "", - "protein_md5": "07e6492c255a0b650400bb99932324d2", - "protein_translation": "MTIHKKGQAHWEGDIKRGKGTVSTESGVLNQQPYGFNTRFEGEKGTNPEELIGAAHAACFSMALSLMLGEAGFTPTSIDTTADVSLDKVDAGFAITKIALKSEVAVPGIDASTFDGIIQKAKAGCPVSQVLKAEITLDYQLKS", - "protein_translation_length": 143, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129442" - ], - [ - "gene_synonym", - "JW1478" - ], - [ - "gene_synonym", - "GeneID:946020" - ], - [ - "gene_synonym", - "yddO" - ], - [ - "gene_synonym", - "ASAP:ABE-0004947" - ], - [ - "gene_synonym", - "ECK1477" - ], - [ - "gene_synonym", - "NP_416000.1" - ], - [ - "gene_synonym", - "b1483" - ], - [ - "gene_synonym", - "ddpF" - ], - [ - "gene_synonym", - "EcoGene:EG13786" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77622" - ] - ], - "dna_sequence": "GTGTCTGACACGTTATTAACGTTACGCGACGTCCATATCAATTTCCCGGCCCGTAAAAACTGGCTTGGTAAAACTACGGAACATGTTCATGCCATTAATGGTATTGATTTACAGATCCGCCGTGGTGAAACCTTAGGGATCGTCGGCGAGTCAGGCTGCGGCAAAAGCACCCTCGCACAGCTTTTAATGGGTATGCTGCAACCGAGCCACGGGCAGTACATCCGTTCTGGCTCACAACGCATTATGCAGATGGTGTTTCAGGACCCGCTCTCTTCGCTTAATCCGCGCTTACCGGTGTGGCGCATCATCACAGAACCGCTCTGGATAGCTAAGCGTAGTAGTGAACAACAGCGGCGAGCGTTGGCAGAGGAGTTGGCTGTGCAGGTGGGTATTCGTCCGGAGTATCTCGACCGCCTGCCTCATGCGTTCTCCGGCGGGCAGCGGCAACGTATCGCCATTGCCAGAGCACTCTCTTCGCAGCCTGACGTGATTGTGCTTGATGAGCCAACCTCTGCGCTGGATATCTCCGTTCAGGCGCAGATCCTCAATTTACTGGTAACGCTACAGGAAAATCACGGGCTGACCTATGTGCTGATTTCACACAATGTCTCGGTGATACGTCATATGAGCGATCGGGTGGCGGTGATGTATCTCGGGCAGATTGTAGAACTGGGCGACGCGCAGCAGGTGCTGACGGCACCTGCACATCCATACACCCGATTATTGCTGGATTCCCTCCCCGCCATTGATAAACCGCTGGAGGAAGAATGGGCATTACGTAAAACGGATCTGCCGGGAAACCGCACGTTGCCGCAAGGCTGTTTTTTCTACGAACGTTGCCCGCTGGCAACCCACGGATGTGAAGTCCGGCAATCATTAGCAATAAGGGAGGACGGACGTGAGCTCCGGTGCTGGCGGGCGCTGTAG", - "dna_sequence_length": 927, - "functions": [ - "D,D-dipeptide ABC transporter ATPase" - ], - "id": "CDS_1470", - "location": [ - [ - "NC_000913", - 1558038, - "-", - 927 - ] - ], - "md5": "3e1aff0ec45e655e33e8cb52b34e61ae", - "parent_gene": "", - "protein_md5": "d8bee2f022b1f8fdf7d9f7757fc16cf5", - "protein_translation": "MSDTLLTLRDVHINFPARKNWLGKTTEHVHAINGIDLQIRRGETLGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRIITEPLWIAKRSSEQQRRALAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQPDVIVLDEPTSALDISVQAQILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYLGQIVELGDAQQVLTAPAHPYTRLLLDSLPAIDKPLEEEWALRKTDLPGNRTLPQGCFFYERCPLATHGCEVRQSLAIREDGRELRCWRAL", - "protein_translation_length": 308, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946002" - ], - [ - "gene_synonym", - "JW1479" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77268" - ], - [ - "gene_synonym", - "yddP" - ], - [ - "gene_synonym", - "b1484" - ], - [ - "gene_synonym", - "GI:16129443" - ], - [ - "gene_synonym", - "NP_416001.1" - ], - [ - "gene_synonym", - "ddpD" - ], - [ - "gene_synonym", - "ECK1478" - ], - [ - "gene_synonym", - "ASAP:ABE-0004949" - ], - [ - "gene_synonym", - "EcoGene:EG13787" - ] - ], - "dna_sequence": "ATGACCCAACCCGTTCTGGACATTCAACAACTGCATTTGAGTTTCCCCGGTTTTAACGGTGATGTTCACGCGCTCAACAATGTGTCCTTGCAGATTAACCGCGGTGAAATTGTCGGTCTGGTGGGAGAATCCGGCTCAGGTAAATCAGTCACCGCAATGCTGATTATGCGTCTGCTACCGACGGGCAGTTATTGCGTACATCGGGGGCAGATTTCCCTGCTGGGAGAAGATGTTCTTAACGCGCGGGAAAAACAGCTTCGTCAGTGGCGCGGCGCACGAGTGGCGATGATCTTTCAGGAACCGATGACCGCCCTCAATCCGACACGTCGAATAGGTCTTCAGATGATGGACGTGATCCGCCATCATCAACCAATAAGTCGTCGGGAAGCCAGAGCTAAAGCGATTGACCTGCTGGAAGAGATGCAAATCCCGGATGCCGTGGAAGTTATGTCGCGCTATCCGTTTGAGCTTTCAGGTGGTATGCGCCAGCGGGTAATGATTGCGCTGGCATTCTCCTGCGAGCCGCAATTGATTATTGCCGACGAACCGACTACGGCGCTGGACGTCACGGTGCAGTTGCAGGTACTGCGTTTGCTTAAACATAAAGCCCGCGCCAGTGGAACTGCGGTTCTGTTCATCAGCCATGATATGGCCGTGGTGTCGCAACTGTGCGATAGCGTTTACGTGATGTATGCCGGAAGCGTAATTGAAAGCGGCGTGACGGCAGACGTTATCCATCATCCCCGGCATCCGTATACCATTGGTTTGCTGCAATGCGCACCAGAACATGGAGTACCACGCCAGCTATTACCCGCCATTCCAGGGACGGTACCAAACCTCACCCATTTGCCTGACGGCTGCGCTTTTCGCGATCGTTGCTATGCGGCAGGTGCACAGTGTGAAAACGTCCCGGCGCTGACAGCGTGTGGTGACAACAACCAGCGCTGTGCCTGTTGGTATCCGCAGCAGGAGGTTATAAGTGTCTGA", - "dna_sequence_length": 987, - "functions": [ - "D,D-dipeptide ABC transporter ATPase" - ], - "id": "CDS_1471", - "location": [ - [ - "NC_000913", - 1559017, - "-", - 987 - ] - ], - "md5": "e87594215703bc7749199339d1fbe729", - "parent_gene": "", - "protein_md5": "3376089565e5e6932e81ddace09e7991", - "protein_translation": "MTQPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGESGSGKSVTAMLIMRLLPTGSYCVHRGQISLLGEDVLNAREKQLRQWRGARVAMIFQEPMTALNPTRRIGLQMMDVIRHHQPISRREARAKAIDLLEEMQIPDAVEVMSRYPFELSGGMRQRVMIALAFSCEPQLIIADEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMAVVSQLCDSVYVMYAGSVIESGVTADVIHHPRHPYTIGLLQCAPEHGVPRQLLPAIPGTVPNLTHLPDGCAFRDRCYAAGAQCENVPALTACGDNNQRCACWYPQQEVISV", - "protein_translation_length": 328, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946028" - ], - [ - "gene_synonym", - "NP_416002.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004953" - ], - [ - "gene_synonym", - "EcoGene:EG13788" - ], - [ - "gene_synonym", - "yddQ" - ], - [ - "gene_synonym", - "b1485" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77463" - ], - [ - "gene_synonym", - "GI:16129444" - ], - [ - "gene_synonym", - "JW1480" - ], - [ - "gene_synonym", - "ECK1479" - ], - [ - "gene_synonym", - "ddpC" - ] - ], - "dna_sequence": "ATGATGCTAAGCGAGGAAACGTCCGCCGTACGCCCACAAAAACAAACGCGATTTAACGGTGCAAAACTGGTATGGATGCTGAAAGGCAGTCCGCTCACCGTGACCAGCGCAGTCATCATTGTATTAATGCTATTGATGATGATTTTTTCACCGTGGCTGGCGACGCATGATCCCAACGCCATTGATTTAACCGCCCGCCTTTTGCCGCCTTCTGCGGCGCACTGGTTTGGCACCGATGAAGTGGGACGCGATCTGTTTAGCCGCGTACTGGTCGGCAGTCAGCAATCAATTCTCGCCGGATTAGTCGTGGTTGCCATTGCGGGTATGATTGGTTCGCTACTCGGATGTCTATCCGGTGTGCTTGGTGGACGCGCAGACGCCATCATCATGCGCATCATGGACATTATGCTGTCGATTCCTTCGTTGGTACTGACAATGGCACTGGCTGCCGCTCTCGGGCCGAGTTTGTTTAACGCCATGCTGGCTATTGCTATTGTGCGAATTCCCTTTTATGTGCGCCTGGCGCGGGGGCAAGCATTAGTTGTACGCCAGTATACCTATGTTCAGGCGGCGAAAACCTTTGGCGCGTCTCGTTGGCATCTGATCAACTGGCATATTTTACGTAACTCCCTACCGCCGCTGATCGTGCAGGCATCGCTGGATATCGGTAGCGCGATTTTAATGGCCGCCACGTTGGGATTTATTGGCCTGGGTGCTCAACAACCGAGTGCTGAATGGGGCGCGATGGTAGCAAATGGTCGCAACTATGTACTCGATCAGTGGTGGTATTGCGCATTTCCGGGGGCAGCGATTTTGCTTACCGCCGTCGGGTTTAATCTCTTTGGTGATGGTATTCGCGATCTGCTTGACCCGAAAGCAGGAGGAAAGCAGTCATGA", - "dna_sequence_length": 897, - "functions": [ - "D,D-dipeptide ABC transporter permease" - ], - "id": "CDS_1472", - "location": [ - [ - "NC_000913", - 1559910, - "-", - 897 - ] - ], - "md5": "54d09f54443a9b3297da3aa6dbfebe38", - "parent_gene": "", - "protein_md5": "69b1fb4d2afbbf4b253bc1f265e81454", - "protein_translation": "MMLSEETSAVRPQKQTRFNGAKLVWMLKGSPLTVTSAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPKAGGKQS", - "protein_translation_length": 298, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416003.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77308" - ], - [ - "gene_synonym", - "JW1481" - ], - [ - "gene_synonym", - "ASAP:ABE-0004955" - ], - [ - "gene_synonym", - "yddR" - ], - [ - "gene_synonym", - "b1486" - ], - [ - "gene_synonym", - "EcoGene:EG13789" - ], - [ - "gene_synonym", - "GI:16129445" - ], - [ - "gene_synonym", - "GeneID:946044" - ], - [ - "gene_synonym", - "ddpB" - ], - [ - "gene_synonym", - "ECK1480" - ] - ], - "dna_sequence": "GTGACCTTCTGGAGTATTTTACGCCAACGCTGCTGGGGGCTGGTGCTCGTGGTGGCGGGCGTCTGCGTGATTACGTTTATTATCTCGCATCTGATCCCTGGTGATCCGGCGCGGTTACTGGCGGGTGACCGCGCCAGCGATGCTATCGTGGAAAATATTCGCCAGCAACTGGGACTGGACCAGCCACTGTATGTACAGTTTTACCGCTACGTCAGCGACCTGTTTCATGGTGACCTGGGAACATCCATTCGTACCGGGCGTCCGGTGCTGGAAGAGTTGCGTATATTTTTCCCGGCGACGCTGGAGCTGGCTTTTGGTGCCCTGCTGCTGGCACTCCTGATTGGCATCCCGCTGGGCATACTCTCTGCAGTCTGGCGAAATCGCTGGCTGGATCATCTGGTGCGAATAATGGCCATTACCGGAATCTCCACACCTGCGTTCTGGCTTGGGCTGGGCGTCATTGTGCTGTTTTATGGTCATCTGCAAATTCTTCCCGGCGGCGGAAGGCTTGATGACTGGCTGGATCCACCAACGCACGTTACCGGCTTTTATCTGCTCGATGCGCTGCTTGAAGGCAACGGTGAAGTCTTCTTCAATGCGTTGCAACATCTCATCTTACCGGCATTAACGCTGGCGTTCGTTCACCTGGGAATTGTCGCTCGCCAGATCCGCTCAGCGATGCTGGAACAATTGAGTGAAGACTACATTCGTACCGCCCGGGCCAGCGGCTTGCCCGGCTGGTATATCGTTTTATGTTATGCGCTACCCAATGCGTTGATCCCATCGATTACCGTATTGGGTTTGGCGCTGGGCGATTTGTTGTATGGCGCAGTGCTCACCGAAACCGTTTTTGCCTGGCCCGGAATGGGTGCATGGGTAGTAACATCAATACAGGCGCTCGACTTCCCGGCAGTGATGGGCTTTGCCGTCGTGGTTTCATTTGCTTATGTGCTGGTCAACCTGGTGGTGGATTTGCTCTATTTGTGGATTGATCCGCGTATCGGACGTGGAGGTGGTGAATGA", - "dna_sequence_length": 1023, - "functions": [ - "D,D-dipeptide ABC transporter permease" - ], - "id": "CDS_1473", - "location": [ - [ - "NC_000913", - 1560929, - "-", - 1023 - ] - ], - "md5": "710fdb2c81f0e9f9d8068bb0030ef6d2", - "parent_gene": "", - "protein_md5": "0ae3bbb4665fc4cc6a9b126cec50c649", - "protein_translation": "MTFWSILRQRCWGLVLVVAGVCVITFIISHLIPGDPARLLAGDRASDAIVENIRQQLGLDQPLYVQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLELAFGALLLALLIGIPLGILSAVWRNRWLDHLVRIMAITGISTPAFWLGLGVIVLFYGHLQILPGGGRLDDWLDPPTHVTGFYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGIVARQIRSAMLEQLSEDYIRTARASGLPGWYIVLCYALPNALIPSITVLGLALGDLLYGAVLTETVFAWPGMGAWVVTSIQALDFPAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRIGRGGGE", - "protein_translation_length": 340, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5240" - ], - [ - "gene_synonym", - "NP_416004.1" - ], - [ - "gene_synonym", - "yddS" - ], - [ - "gene_synonym", - "EcoGene:EG13790" - ], - [ - "gene_synonym", - "b1487" - ], - [ - "gene_synonym", - "GI:16129446" - ], - [ - "gene_synonym", - "ASAP:ABE-0004958" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76128" - ], - [ - "gene_synonym", - "ddpA" - ], - [ - "gene_synonym", - "ECK1481" - ], - [ - "gene_synonym", - "GeneID:946052" - ] - ], - "dna_sequence": "ATGAAGAGATCGATATCGTTTCGTCCCACATTGCTCGCGCTCGTCCTTGCCACAAATTTCCCGGTTGCGCACGCCGCCGTACCAAAAGATATGCTGGTGATTGGTAAGGCCGCCGATCCACAAACCCTCGACCCGGCGGTAACAATAGATAATAACGACTGGACAGTGACCTACCCGTCTTATCAGCGGCTGGTTCAGTACAAAACGGACGGTGATAAAGGCTCAACCGACGTTGAAGGCGATCTGGCAAGTAGCTGGAAAGCGTCTGACGATCAAAAAGAGTGGACGTTCACCCTGAAAGATAATGCTAAATTTGCCGATGGCACACCTGTCACTGCCGAAGCAGTAAAACTTTCTTTTGAGCGGCTACTAAAAATCGGCCAGGGGCCAGCAGAAGCATTTCCCAAAGATTTAAAGATTGATGCTCCCGACGAACATACGGTGAAGTTTACCCTTAGCCAACCATTCGCACCGTTCCTCTACACGCTGGCGAATGACGGTGCATCCATTATCAATCCGGCGGTCTTAAAGGAACATGCAGCGGATGATGCTCGCGGCTTCCTCGCGCAAAATACCGCCGGTTCCGGACCATTTATGCTGAAAAGCTGGCAAAAAGGTCAGCAATTAGTTCTGGTGCCAAATCCGCATTACCCAGGCAATAAACCGAACTTCAAACGGGTATCGGTAAAAATTATTGGTGAAAGTGCCTCCCGTCGCCTGCAGCTCTCCCGTGGCGACATTGACATTGCCGATGCGCTGCCGGTGGATCAACTCAACGCCCTGAAGCAGGAAAATAAAGTCAATGTGGCAGAGTATCCGTCACTGCGCGTTACCTATCTGTATCTGAATAACAGCAAAGCGCCTCTTAATCAGGCGGATCTGCGTCGGGCCATTTCCTGGTCTACCGATTATCAGGGCATGGTTAACGGCATTCTGAGTGGTAACGGAAAACAGATGCGCGGCCCGATTCCGGAAGGCATGTGGGGCTACGATGCGACGGCAATGCAATACAACCATGACGAAACGAAAGCCAAAGCCGAATGGGATAAAGTGACGAGCAAACCCACCAGCCTGACGTTTCTCTACTCCGATAACGATCCGAACTGGGAGCCTATTGCTCTGGCGACACAATCCAGTCTCAACAAGCTGGGCATCATTGTGAAGCTGGAAAAGCTGGCGAACGCCACCATGCGCGACAGAGTGGGTAAAGGTGATTACGACATTGCGATTGGCAACTGGAGTCCGGATTTTGCCGACCCGTATATGTTTATGAATTACTGGTTTGAGTCAGACAAAAAAGGTCTGCCGGGTAACCGCTCGTTCTATGAAAACAGTGAGGTCGATAAGTTACTGCGCAATGCGCTTGCGACCACCGACCAGACGCAGCGTACCCGGGACTACCAGCAGGCACAGAAAATCGTCATTGATGACGCTGCTTATGTGTACCTGTTCCAGAAAAACTACCAACTGGCGATGAACAAAGAGGTGAAAGGCTTTGTGTTCAATCCCATGCTGGAACAGGTCTTCAATATCAATACCATGAGTAAATAA", - "dna_sequence_length": 1551, - "functions": [ - "D,D-dipeptide ABC transporter periplasmic binding protein" - ], - "id": "CDS_1474", - "location": [ - [ - "NC_000913", - 1562481, - "-", - 1551 - ] - ], - "md5": "ecdbb4b64ac3ee3b335874b0607ab32e", - "parent_gene": "", - "protein_md5": "c2ca9940392015bff489ca1213c49a3c", - "protein_translation": "MKRSISFRPTLLALVLATNFPVAHAAVPKDMLVIGKAADPQTLDPAVTIDNNDWTVTYPSYQRLVQYKTDGDKGSTDVEGDLASSWKASDDQKEWTFTLKDNAKFADGTPVTAEAVKLSFERLLKIGQGPAEAFPKDLKIDAPDEHTVKFTLSQPFAPFLYTLANDGASIINPAVLKEHAADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYPGNKPNFKRVSVKIIGESASRRLQLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLRVTYLYLNNSKAPLNQADLRRAISWSTDYQGMVNGILSGNGKQMRGPIPEGMWGYDATAMQYNHDETKAKAEWDKVTSKPTSLTFLYSDNDPNWEPIALATQSSLNKLGIIVKLEKLANATMRDRVGKGDYDIAIGNWSPDFADPYMFMNYWFESDKKGLPGNRSFYENSEVDKLLRNALATTDQTQRTRDYQQAQKIVIDDAAYVYLFQKNYQLAMNKEVKGFVFNPMLEQVFNINTMSK", - "protein_translation_length": 516, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ddpX" - ], - [ - "gene_synonym", - "GeneID:945532" - ], - [ - "gene_synonym", - "JW1483" - ], - [ - "gene_synonym", - "vanX" - ], - [ - "gene_synonym", - "yddT" - ], - [ - "gene_synonym", - "ASAP:ABE-0004960" - ], - [ - "gene_synonym", - "EcoGene:EG13791" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77790" - ], - [ - "gene_synonym", - "GI:16129447" - ], - [ - "gene_synonym", - "NP_416005.1" - ], - [ - "gene_synonym", - "b1488" - ], - [ - "gene_synonym", - "ECK1482" - ] - ], - "dna_sequence": "ATGTCGGATACCACCGAACTGGTTGATTTAGCCGTAATCTTCCCTGATCTGGAGATCGAATTGAAATACGCCTGCGCTGATAACATCACAGGTAAAGCTATTTATCAGCAAGCGCGTTGTCTGTTACACAAGGATGCGATTACCGCGCTGGCGAAAAGTATCAGCATCGCCCAGCTGTCAGGGTTACAACTGGTGATTTACGATGCGTATCGCCCACAACAAGCACAGGCGATGTTGTGGCAAGCCTGCCCAGACCCGCAATATGTTGTTGATGTGACGGTCGGTTCTAATCACAGCCGTGGCACGGCGATCGACCTGACGCTTCGTGATGAGCACGGGAACATCCTCGATATGGGCGCAGGGTTCGATGAAATGCACGAGCGCTCCCATGCCTATCACCCTTCCGTCCCGCCCGCCGCTCAGCGCAATCGGCTGTTGCTGAATGCGATAATGACTGGTGGCGGTTTTGTCGGTATCTCCAGCGAATGGTGGCACTTCGAATTACCCCAGGCAGCGAGTTACCCTCTGCTCGCTGATCAATTCTCTTGTTTTATATCCCCTGGCACACAGCACGTCAGTTAA", - "dna_sequence_length": 582, - "functions": [ - "D-ala-D-ala dipeptidase, Zn-dependent" - ], - "id": "CDS_1475", - "location": [ - [ - "NC_000913", - 1563076, - "-", - 582 - ] - ], - "md5": "310fcb526b64fc74a1ec482345217742", - "parent_gene": "", - "protein_md5": "aaa12b35867f101c0057294ada43f71f", - "protein_translation": "MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILDMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGISSEWWHFELPQAASYPLLADQFSCFISPGTQHVS", - "protein_translation_length": 193, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1484" - ], - [ - "gene_synonym", - "GI:162135902" - ], - [ - "gene_synonym", - "yddU" - ], - [ - "gene_synonym", - "ASAP:ABE-0004963" - ], - [ - "gene_synonym", - "NP_416006.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76129" - ], - [ - "gene_synonym", - "dos" - ], - [ - "gene_synonym", - "dosP" - ], - [ - "gene_synonym", - "ECK1483" - ], - [ - "gene_synonym", - "b1489" - ], - [ - "gene_synonym", - "GeneID:945815" - ], - [ - "gene_synonym", - "EcoGene:EG13792" - ] - ], - "dna_sequence": "ATGAAGCTAACCGATGCGGATAATGCCGCCGATGGCATTTTTTTCCCCGCCCTTGAGCAAAATATGATGGGTGCGGTGTTAATTAACGAAAATGATGAAGTGATGTTTTTCAACCCCGCCGCAGAGAAGCTCTGGGGATACAAACGTGAAGAAGTCATTGGCAATAACATTGATATGCTGATTCCGCGGGATTTGCGTCCTGCGCATCCTGAATACATTCGTCACAACCGTGAAGGCGGTAAAGCGCGTGTTGAGGGGATGAGTCGGGAGCTGCAGCTGGAGAAAAAAGACGGCAGTAAAATCTGGACCCGTTTTGCGCTATCGAAAGTGAGCGCCGAGGGGAAAGTTTATTACCTGGCGCTGGTACGGGATGCCAGCGTAGAAATGGCGCAAAAAGAACAGACCCGACAATTGATTATTGCCGTTGACCATCTCGACCGACCGGTGATTGTCCTCGATCCGGAACGCCATATTGTGCAGTGCAATCGCGCATTTACCGAAATGTTTGGTTACTGCATTAGCGAAGCCAGCGGTATGCAGCCCGATACACTCCTGAACATTCCTGAATTCCCTGCCGATAACCGCATTCGTTTACAACAGTTGCTATGGAAAACCGCCCGCGATCAGGACGAATTTCTGCTGTTGACGCGCACCGGTGAAAAAATCTGGATTAAAGCCTCTATCAGCCCGGTTTATGACGTGCTCGCGCATCTGCAGAACCTGGTAATGACTTTCTCGGATATCACCGAAGAACGGCAGATTCGCCAGCTTGAAGGCAATATTCTCGCCGCCATGTGCAGCAGCCCGCCATTTCATGAAATGGGGGAAATCATTTGTCGTAACATCGAATCTGTACTCAACGAATCGCATGTTTCGCTGTTCGCACTGCGCAACGGGATGCCGATACACTGGGCGTCATCTTCCCACGGTGCAGAAATTCAAAATGCGCAAAGCTGGTCAGCGACCATTCGTCAGCGTGATGGCGCGCCTGCGGGGATCCTGCAAATTAAAACCTCGTCAGGAGCAGAAACCAGCGCCTTTATCGAACGCGTGGCAGATATCAGCCAGCATATGGCCGCGCTGGCGCTGGAACAGGAAAAAAGCCGTCAGCATATTGAACAACTCATCCAATTTGATCCGATGACCGGTCTGCCAAATCGCAATAACCTGCACAATTACCTCGATGACCTGGTCGACAAAGCCGTCTCTCCCGTGGTGTATCTCATCGGTGTTGACCATATTCAGGATGTGATTGATAGCCTTGGCTATGCGTGGGCCGATCAGGCATTGCTGGAAGTGGTCAATCGCTTTCGTGAAAAACTCAAACCGGATCAGTATCTCTGTCGTATCGAAGGTACGCAGTTTGTCCTCGTGAGCCTCGAAAACGACGTCAGTAACATTACCCAAATCGCCGATGAGCTACGGAATGTGGTCAGCAAGCCGATAATGATTGACGATAAACCCTTCCCGCTTACCTTGAGTATTGGCATCAGCTACGACCTGGGTAAAAACCGCGATTACTTGCTCTCCACTGCTCACAATGCAATGGATTATATTCGCAAGAATGGCGGTAACGGCTGGCAGTTCTTCAGCCCGGCGATGAACGAAATGGTAAAAGAGCGTTTGGTTTTAGGCGCAGCGCTGAAAGAAGCGATTAGCAATAACCAACTGAAACTGGTTTACCAGCCGCAAATCTTCGCAGAAACGGGTGAACTGTACGGCATCGAAGCCCTTGCTCGCTGGCACGATCCCCTGCATGGTCATGTGCCCCCTTCACGGTTTATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCGGAAGCTTGCCGTCAGTTAGCAGAATGGCGTAGCCAGAATATTCATATCCCGGCGTTATCCGTGAACTTGTCGGCGCTGCACTTTCGCAGTAATCAACTGCCTAATCAGGTGTCTGATGCAATGCACGCCTGGGGTATTGACGGCCACCAGCTGACGGTAGAAATCACGGAAAGCATGATGATGGAACACGATACCGAAATCTTTAAGCGCATTCAGATCCTGCGTGATATGGGCGTGGGCTTATCGGTAGATGATTTTGGTACGGGCTTTTCCGGATTATCCCGCTTAGTCAGTCTTCCGGTAACGGAAATCAAAATTGACAAAAGTTTTGTCGATCGTTGTCTGACCGAAAAACGCATCCTTGCCTTACTTGAAGCCATTACCAGCATTGGGCAAAGCCTCAATTTAACCGTCGTGGCGGAAGGCGTCGAAACCAAAGAGCAATTTGAGATGCTACGCAAGATCCACTGTCGCGTTATTCAGGGATATTTCTTTTCCCGCCCCCTACCCGCCGAAGAAATTCCAGGCTGGATGAGCAGCGTGTTACCGCTGAAAATCTGA", - "dna_sequence_length": 2400, - "functions": [ - "oxygen sensor, c-di-GMP phosphodiesterase, heme-regulated", - "cold- and stationary phase-induced bioflim regulator" - ], - "id": "CDS_1476", - "location": [ - [ - "NC_000913", - 1565733, - "-", - 2400 - ] - ], - "md5": "71bebf6453d90630d4f38c4d34daf458", - "parent_gene": "", - "protein_md5": "2f590e20b0671568b11a3fa93077b79c", - "protein_translation": "MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI", - "protein_translation_length": 799, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA89" - ], - [ - "gene_synonym", - "JW5241" - ], - [ - "gene_synonym", - "NP_416007.3" - ], - [ - "gene_synonym", - "dosC" - ], - [ - "gene_synonym", - "ASAP:ABE-0004965" - ], - [ - "gene_synonym", - "b1490" - ], - [ - "gene_synonym", - "GI:145698262" - ], - [ - "gene_synonym", - "yddV" - ], - [ - "gene_synonym", - "GeneID:945835" - ], - [ - "gene_synonym", - "ECK1484" - ], - [ - "gene_synonym", - "EcoGene:EG13793" - ] - ], - "dna_sequence": "ATGGAGATGTATTTTAAAAGAATGAAAGATGAGTGGACCGGACTTGTCGAACAGGCAGATCCGCCCATTCGTGCTAAAGCCGCGGAAATTGCCGTTGCGCATGCTCATTATCTGAGTATCGAGTTTTATCGAATTGTCCGCATCGACCCGCATGCCGAAGAATTCTTGAGTAATGAACAAGTTGAGCGGCAGTTGAAGAGTGCGATGGAACGCTGGATTATTAACGTGCTTTCTGCCCAGGTTGACGATGTCGAAAGGCTAATACAAATCCAGCATACCGTCGCGGAAGTGCATGCCCGCATAGGAATTCCGGTAGAAATTGTCGAGATGGGGTTTCGGGTGCTGAAAAAAATCCTCTATCCGGTGATCTTCTCTTCGGATTATTCCGCCGCAGAAAAACTTCAGGTCTACCATTTCTCGATTAACAGTATTGATATCGCGATGGAAGTGATGACTCGCGCGTTTACCTTTAGTGACAGTAGTGCCTCAAAGGAAGATGAAAACTATCGTATCTTCTCGTTACTGGAAAACGCCGAAGAAGAAAAAGAACGGCAAATAGCCTCAATACTTTCATGGGAAATAGATATTATCTATAAAATCCTGCTGGATTCTGATTTAGGCAGTAGTTTGCCTTTAAGCCAGGCTGATTTTGGCCTGTGGTTTAACCATAAAGGTCGACATTATTTTAGTGGTATTGCCGAAGTAGGCCATATCTCCCGTCTGATTCAGGATTTCGACGGTATTTTCAATCAAACCATGCGTAACACCAGAAATTTGAATAACAGAAGTCTGCGGGTGAAATTTTTATTACAGATAAGAAATACCGTATCGCAAATTATTACCTTGCTGCGTGAATTGTTTGAAGAAGTATCGCGCCACGAAGTCGGTATGGATGTACTGACGAAATTACTTAACCGCCGTTTCCTACCGACTATCTTCAAACGCGAAATTGCCCATGCCAACCGGACCGGTACACCGCTGTCAGTGCTGATTATTGACGTTGATAAATTCAAAGAGATCAACGATACGTGGGGCCATAACACTGGTGATGAAATTCTGCGTAAAGTCTCTCAGGCCTTTTATGACAACGTCCGCAGTAGTGATTATGTTTTCCGCTACGGGGGCGATGAATTTATCATTGTTTTGACTGAAGCTTCTGAAAACGAAACGTTACGTACCGCAGAACGTATTCGCAGTCGGGTGGAGAAAACCAAACTGAAAGCCGCAAACGGCGAAGATATTGCCCTCTCACTTTCCATCGGTGCCGCCATGTTTAATGGTCATCCTGACTATGAGCGCCTCATTCAAATAGCCGATGAAGCTCTGTATATCGCCAAAAGACGAGGTAGAAACCGTGTTGAACTCTGGAAAGCCAGTCTTTAG", - "dna_sequence_length": 1383, - "functions": [ - "diguanylate cyclase, cold- and stationary phase-induced oxygen-dependent biofilm regulator" - ], - "id": "CDS_1477", - "location": [ - [ - "NC_000913", - 1567140, - "-", - 1383 - ] - ], - "md5": "4fc52d497df8bdb7ff4c0f699e411efc", - "parent_gene": "", - "protein_md5": "b2cd9c6510aebc7d393c832dbc8f0778", - "protein_translation": "MEMYFKRMKDEWTGLVEQADPPIRAKAAEIAVAHAHYLSIEFYRIVRIDPHAEEFLSNEQVERQLKSAMERWIINVLSAQVDDVERLIQIQHTVAEVHARIGIPVEIVEMGFRVLKKILYPVIFSSDYSAAEKLQVYHFSINSIDIAMEVMTRAFTFSDSSASKEDENYRIFSLLENAEEEKERQIASILSWEIDIIYKILLDSDLGSSLPLSQADFGLWFNHKGRHYFSGIAEVGHISRLIQDFDGIFNQTMRNTRNLNNRSLRVKFLLQIRNTVSQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNGHPDYERLIQIADEALYIAKRRGRNRVELWKASL", - "protein_translation_length": 460, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1486" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64426" - ], - [ - "gene_synonym", - "yddW" - ], - [ - "gene_synonym", - "b1491" - ], - [ - "gene_synonym", - "ASAP:ABE-0004970" - ], - [ - "gene_synonym", - "GeneID:945975" - ], - [ - "gene_synonym", - "NP_416008.1" - ], - [ - "gene_synonym", - "EcoGene:EG13794" - ], - [ - "gene_synonym", - "ECK1485" - ], - [ - "gene_synonym", - "GI:16129450" - ] - ], - "dna_sequence": "ATGGATATCTGCTCCCGAAACAAGAAATTAACGATTAGAAGACCAGCGATACTAGTTGCACTGGCACTTTTACTGTGTAGTTGTAAAAGCACGCCTCCAGAGTCCATGGTGACACCACCAGCAGGTTCAAAGCCACCAGCCACGACGCAACAATCGTCACAACCGATGCGTGGCATCTGGCTGGCCACGGTTTCTCGGCTCGACTGGCCACCGGTTTCCTCGGTTAACATTAGTAACCCCACCAGCCGGGCCCGTGTACAACAACAGGCGATGATCGACAAACTGGATCATCTGCAACGTCTCGGCATAAACACGGTCTTTTTCCAGGTCAAGCCGGACGGTACCGCCCTGTGGCCATCGAAAATTTTGCCGTGGTCCGATCTTATGACCGGTAAGATTGGTGAAAATCCGGGTTACGATCCGCTGCAATTTATGCTCGACGAAGCCCACAAGCGTGGGATGAAAGTACACGCCTGGTTTAACCCCTATCGCGTATCGGTTAATACGAAGCCCGGTACTATCAGGGAACTGAATAGCACTCTGTCTCAACAACCGGCGAGCGTCTATGTGCAACACCGCGACTGGATCAGAACGTCTGGCGATCGCTTTGTCCTCGACCCGGGCATCCCTGAGGTTCAGGACTGGATCACATCAATAGTCGCAGAAGTGGTTTCCCGCTATCCCGTAGATGGCGTGCAGTTTGACGACTATTTCTATACGGAGTCACCGGGTTCACGGCTAAATGATAACGAAACGTACCGTAAATACGGAGGCGCATTTGCGTCAAAAGCAGACTGGCGGCGCAACAATACTCAGCAGTTAATTGCAAAGGTATCGCACACCATTAAAAGCATTAAGCCGGGAGTCGAATTTGGTGTTAGCCCGGCAGGCGTGTGGCGTAACCGATCACACGATCCGCTCGGTTCCGATACCCGAGGCGCGGCAGCCTATGACGAATCCTACGCTGACACCCGTCGATGGGTGGAACAAGGATTGCTGGATTACATTGCTCCCCAAATTTACTGGCCGTTCTCACGGAGTGCCGCGCGTTATGACGTGTTGGCAAAATGGTGGGCGGATGTCGTTAAACCGACCAGGACCCGCCTGTATATCGGTATCGCCTTCTATAAAGTGGGTGAACCTTCAAAGATAGAGCCAGACTGGATGATTAACGGCGGCGTACCGGAACTGAAAAAGCAGCTCGATCTTAACGATGCTGTGCCCGAAATTAGCGGCACCATCTTGTTCCGTGAGGACTATCTGAATAAACCGCAGACTCAACAAGCGGTCAGCTATCTGCAAAGTCGCTGGGGCAGTTAA", - "dna_sequence_length": 1320, - "functions": [ - "liprotein, glycosyl hydrolase homolog" - ], - "id": "CDS_1478", - "location": [ - [ - "NC_000913", - 1568823, - "-", - 1320 - ] - ], - "md5": "fccc2845d292211406e0b04920fb76d9", - "parent_gene": "", - "protein_md5": "6333ba099b7dc5ad261d9388411a5567", - "protein_translation": "MDICSRNKKLTIRRPAILVALALLLCSCKSTPPESMVTPPAGSKPPATTQQSSQPMRGIWLATVSRLDWPPVSSVNISNPTSRARVQQQAMIDKLDHLQRLGINTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWFNPYRVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITSIVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKPGVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGLLDYIAPQIYWPFSRSAARYDVLAKWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMINGGVPELKKQLDLNDAVPEISGTILFREDYLNKPQTQQAVSYLQSRWGS", - "protein_translation_length": 439, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1487" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63235" - ], - [ - "gene_synonym", - "b1492" - ], - [ - "gene_synonym", - "NP_416009.1" - ], - [ - "gene_synonym", - "gadC" - ], - [ - "gene_synonym", - "EcoGene:EG12456" - ], - [ - "gene_synonym", - "GI:16129451" - ], - [ - "gene_synonym", - "ECK1486" - ], - [ - "gene_synonym", - "GeneID:946057" - ], - [ - "gene_synonym", - "ASAP:ABE-0004973" - ], - [ - "gene_synonym", - "acsA" - ], - [ - "gene_synonym", - "xasA" - ] - ], - "dna_sequence": "ATGGCTACATCAGTACAGACAGGTAAAGCTAAGCAGCTCACATTACTTGGATTCTTTGCCATAACGGCATCGATGGTAATGGCTGTTTATGAATACCCTACCTTCGCAACATCGGGCTTTTCATTAGTCTTCTTCCTGCTATTAGGCGGGATTTTATGGTTTATTCCCGTGGGACTTTGTGCTGCGGAAATGGCCACCGTCGACGGCTGGGAAGAAGGTGGTGTCTTCGCCTGGGTATCAAATACTCTGGGGCCGAGATGGGGATTTGCAGCGATCTCATTTGGCTATCTGCAAATCGCCATTGGTTTTATTCCGATGCTCTATTTCGTGTTAGGGGCACTCTCCTACATCCTGAAATGGCCAGCGCTGAATGAAGACCCCATTACCAAAACTATTGCAGCACTCATCATTCTTTGGGCGCTGGCATTAACGCAGTTTGGTGGCACGAAATACACGGCGCGAATTGCTAAAGTTGGCTTCTTCGCCGGTATCCTGTTACCTGCATTTATTTTGATCGCATTAGCGGCTATTTATCTGCACTCCGGTGCCCCCGTTGCTATCGAAATGGATTCGAAGACCTTCTTCCCTGACTTCTCTAAAGTGGGCACCCTGGTAGTATTTGTTGCCTTCATTTTGAGTTATATGGGCGTAGAAGCATCCGCAACCCACGTCAATGAAATGAGCAACCCAGGGCGCGACTATCCGTTGGCTATGTTACTGCTGATGGTGGCGGCAATCTGCTTAAGCTCTGTTGGTGGTTTGTCTATTGCGATGGTCATTCCGGGTAATGAAATCAACCTCTCCGCAGGGGTAATGCAAACCTTTACCGTTCTGATGTCCCATGTGGCACCAGAAATTGAGTGGACGGTTCGCGTGATCTCCGCACTGCTGTTGCTGGGTGTTCTGGCGGAAATCGCCTCCTGGATTGTTGGTCCTTCTCGCGGGATGTATGTAACAGCGCAGAAAAACCTGCTGCCAGCGGCATTCGCTAAAATGAACAAAAATGGCGTACCGGTAACGCTGGTCATTTCGCAGCTGGTGATTACGTCTATCGCGTTGATCATCCTCACCAATACCGGTGGCGGTAACAACATGTCCTTCCTGATCGCACTGGCGCTGACGGTGGTGATTTATCTGTGTGCTTATTTCATGCTGTTTATTGGCTACATTGTGTTGGTTCTTAAACATCCTGACTTAAAACGCACATTTAATATCCCTGGTGGTAAAGGGGTGAAACTGGTCGTGGCAATTGTCGGTCTGCTGACTTCAATTATGGCGTTTATTGTTTCCTTCCTGCCGCCGGATAACATCCAGGGTGATTCTACCGATATGTATGTTGAATTACTGGTTGTTAGTTTCCTGGTGGTACTTGCCCTGCCCTTTATTCTCTATGCTGTTCATGATCGTAAAGGCAAAGCAAATACCGGCGTCACTCTGGAGCCAATCAACAGTCAGAACGCACCAAAAGGTCACTTCTTCCTGCACCCGCGTGCACGTTCACCACACTATATTGTGATGAATGACAAGAAACACTAA", - "dna_sequence_length": 1536, - "functions": [ - "glutamate:gamma-aminobutyric acid antiporter" - ], - "id": "CDS_1479", - "location": [ - [ - "NC_000913", - 1570489, - "-", - 1536 - ] - ], - "md5": "d3a094db2573df41a6235e7f7d745981", - "parent_gene": "", - "protein_md5": "1eb6f5d3c5a435f999a6c3dca49a68d4", - "protein_translation": "MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFTVLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNKNGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVLVLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLVVSFLVVLALPFILYAVHDRKGKANTGVTLEPINSQNAPKGHFFLHPRARSPHYIVMNDKKH", - "protein_translation_length": 511, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1493" - ], - [ - "gene_synonym", - "EcoGene:EG11490" - ], - [ - "gene_synonym", - "ASAP:ABE-0004976" - ], - [ - "gene_synonym", - "JW1488" - ], - [ - "gene_synonym", - "NP_416010.1" - ], - [ - "gene_synonym", - "gadB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69910" - ], - [ - "gene_synonym", - "ECK1487" - ], - [ - "gene_synonym", - "GeneID:946058" - ], - [ - "gene_synonym", - "GI:16129452" - ] - ], - "dna_sequence": "ATGGATAAGAAGCAAGTAACGGATTTAAGGTCGGAACTACTCGATTCACGTTTTGGTGCGAAGTCTATTTCCACTATCGCAGAATCAAAACGTTTTCCGCTGCACGAAATGCGCGACGATGTCGCATTCCAGATTATCAATGACGAATTATATCTTGATGGCAACGCTCGTCAGAACCTGGCCACTTTCTGCCAGACCTGGGACGACGAAAATGTCCACAAATTGATGGATTTATCCATTAACAAAAACTGGATCGACAAAGAAGAATATCCGCAATCCGCAGCCATCGACCTGCGTTGCGTAAATATGGTTGCCGATCTGTGGCATGCGCCTGCGCCGAAAAATGGTCAGGCCGTTGGCACCAACACCATTGGTTCTTCCGAGGCCTGTATGCTCGGCGGGATGGCGATGAAATGGCGTTGGCGCAAGCGTATGGAAGCTGCAGGCAAACCAACGGATAAACCAAACCTGGTGTGCGGTCCGGTACAAATCTGCTGGCATAAATTCGCCCGCTACTGGGATGTGGAGCTGCGTGAGATCCCTATGCGCCCCGGTCAGTTGTTTATGGACCCGAAACGCATGATTGAAGCCTGTGACGAAAACACCATCGGCGTGGTGCCGACTTTCGGCGTGACCTACACTGGTAACTATGAGTTCCCACAACCGCTGCACGATGCGCTGGATAAATTCCAGGCCGATACCGGTATCGACATCGACATGCACATCGACGCTGCCAGCGGTGGCTTCCTGGCACCGTTCGTCGCCCCGGATATCGTCTGGGACTTCCGCCTGCCGCGTGTGAAATCGATCAGTGCTTCAGGCCATAAATTCGGTCTGGCTCCGCTGGGCTGCGGCTGGGTTATCTGGCGTGACGAAGAAGCGCTGCCGCAGGAACTGGTGTTCAACGTTGACTACCTGGGTGGTCAAATTGGTACTTTTGCCATCAACTTCTCCCGCCCGGCGGGTCAGGTAATTGCACAGTACTATGAATTCCTGCGCCTCGGTCGTGAAGGCTATACCAAAGTACAGAACGCCTCTTACCAGGTTGCCGCTTATCTGGCGGATGAAATCGCCAAACTGGGGCCGTATGAGTTCATCTGTACGGGTCGCCCGGACGAAGGCATCCCGGCGGTTTGCTTCAAACTGAAAGATGGTGAAGATCCGGGATACACCCTGTATGACCTCTCTGAACGTCTGCGTCTGCGCGGCTGGCAGGTTCCGGCCTTCACTCTCGGCGGTGAAGCCACCGACATCGTGGTGATGCGCATTATGTGTCGTCGCGGCTTCGAAATGGACTTTGCTGAACTGTTGCTGGAAGACTACAAAGCCTCCCTGAAATATCTCAGCGATCACCCGAAACTGCAGGGTATTGCCCAACAGAACAGCTTTAAACATACCTGA", - "dna_sequence_length": 1401, - "functions": [ - "glutamate decarboxylase B, PLP-dependent" - ], - "id": "CDS_1480", - "location": [ - [ - "NC_000913", - 1572045, - "-", - 1401 - ] - ], - "md5": "71a7577ce124ebd0c4488c984f482ac9", - "parent_gene": "", - "protein_md5": "36a9a4610ce76e5efc5008059008fecd", - "protein_translation": "MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHPKLQGIAQQNSFKHT", - "protein_translation_length": 466, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416011.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004979" - ], - [ - "gene_synonym", - "pqqE" - ], - [ - "gene_synonym", - "JW1489" - ], - [ - "gene_synonym", - "b1494" - ], - [ - "gene_synonym", - "EcoGene:EG11744" - ], - [ - "gene_synonym", - "GI:16129453" - ], - [ - "gene_synonym", - "ECK1488" - ], - [ - "gene_synonym", - "GeneID:946059" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31828" - ], - [ - "gene_synonym", - "yddC" - ], - [ - "gene_synonym", - "pqqL" - ], - [ - "gene_synonym", - "pqqM" - ] - ], - "dna_sequence": "ATGGAGATAATTATGAGAAACCTCTGTTTCTTACTGACGTTAGTGGCAACTCTGTTGCTCCCCGGGCGGCTGATTGCCGCCGCCTTACCGCAGGATGAAAAGTTAATTACCGGGCAACTGGACAATGGCTTGCGATATATGATTTATCCGCATGCTCATCCAAAGGATCAGGTAAATTTATGGCTGCAAATTCATACCGGTTCATTGCAGGAAGAAGACAATGAGCTCGGCGTGGCTCATTTTGTAGAACATATGATGTTTAACGGCACAAAAACATGGCCGGGTAATAAAGTCATCGAAACATTTGAGTCAATGGGCCTGCGTTTTGGTCGCGATGTTAATGCCTATACCAGCTATGACGAAACGGTGTATCAGGTGAGTTTGCCGACTACGCAGAAACAAAATCTGCAACAAGTGATGGCAATCTTCAGTGAATGGAGTAATGCCGCAACCTTTGAAAAACTCGAAGTAGACGCTGAACGTGGCGTAATTACTGAGGAATGGCGTGCCCATCAGGATGCGAAATGGCGCACCTCTCAGGCGCGCCGCCCTTTCCTGCTGGCAAATACCCGTAATTTAGACCGTGAACCTATCGGCCTGATGGATACTGTCGCCACGGTCACACCGGCACAATTGCGCCAATTTTATCAACGCTGGTATCAACCAAATAATATGACCTTTATCGTGGTCGGCGATATCGACAGTAAAGAAGCGCTGGCGCTGATAAAGGATAATTTAAGTAAGCTTCCGGCTAACAAAGCAGCTGAAAATCGCGTCTGGCCGACAAAAGCCGAAAACCACCTGCGCTTTAATATCATTAATGATAAAGAAAACCGGGTGAACGGCATCGCACTCTATTATCGCCTGCCAATGGTACAAGTGAACGATGAGCAAAGCTTTATCGAACAAGCTGAATGGAGCATGTTAGTTCAGCTGTTCAATCAACGTCTGCAGGAACGCATACAGTCGGGCGAGTTGAAGACTATTTCTGGCGGCACTGCGCGCAGCGTTAAAATTGCACCCGATTATCAGTCGCTGTTTTTCCGTGTAAATGCACGAGACGATAATATGCAGGATGCTGCGAATGCATTAATGGCAGAGTTGGCAACCATTGATCAGCATGGTTTTTCTGCTGAAGAACTCGATGATGTCAAATCTACCCGCCTCACCTGGCTGAAAAATGCGGTTGATCAGCAAGCTGAACGTGATTTACGTATGCTGACCAGTCGCCTGGCATCCAGCTCATTAAATAATACGCCGTTCTTGTCGCCGGAAGAGACATATCAACTTTCGAAACGTCTGTGGCAGCAAATTACCGTGCAAAGTCTGGCGGAAAAATGGCAGCAGTTAAGAAAGAACCAGGACGCATTTTGGGAGCAAATGGTAAACAATGAGGTTGCCGCCAAAAAAGCATTGTCTCCTGCGGCTATCCTGGCGCTGGAAAAGGAGTACGCCAACAAAAAGCTGGCGGCTTACGTCTTCCCAGGCAGAAATTTATCGTTAACAGTAGACGCAGACCCACAGGCGGAAATTAGCAGCAAAGAAACGCTGGCGGAGAATCTGACATCATTAACACTTTCCAATGGTGCCAGGGTTATTCTGGCAAAATCCGCGGGTGAAGAGCAAAAGCTACAAATTATTGCCGTATCGAATAAAGGCGATTTAAGTTTCCCTGCGCAGCAAAAATCACTTATCGCGCTGGCAAATAAAGCAGTTAGCGGAAGCGGCGTTGGCGAACTCTCCTCTTCCAGCCTGAAACGCTGGAGTGCGGAAAATTCGGTAACCATGAGCAGTAAAGTCAGTGGCATGAATACGTTGCTCTCCGTTAGCGCGCGGACTAATAACCCTGAACCTGGTTTTCAGTTGATTAACCAGCGAATCACCCACAGCACGATTAACGATAATATTTGGGCATCGCTACAAAATGCTCAAATTCAGGCGTTGAAAACGCTCGACCAGCGTCCAGCGGAGAAATTCGCCCAGCAGATGTATGAGACGCGCTATGCTGATGACCGCACGAAATTACTGCAAGAAAATCAGATTGCACAGTTTACTGCCGCAGATGCGCTGGCTGCCGATCGCCAATTGTTTTCATCTCCAGCGGATATCACGTTTGTCATTGTCGGTAATGTCGCAGAAGACAAACTCGTGGCGTTAATTACGCGTTACTTAGGATCAATCAAACACTCTGATTCGCCATTAGCCGCAGGTAAACCATTAACTCGCGCGACGGACAACGCATCGGTTACTGTAAAAGAACAAAATGAACCTGTGGCACAGGTTTCACAGTGGAAGCGTTATGATTCCCGGACACCTGTTAATCTGCCGACGCGTATGGCGCTCGATGCTTTTAACGTCGCACTGGCAAAAGATCTACGTGTTAATATTCGTGAACAGGCATCTGGAGCATACAGCGTTTCTTCTCGCCTCTCGGTTGATCCTCAGGCCAAAGATATCAGTCATTTGCTGGCTTTTACTTGTCAACCAGAACGACATGATGAACTGTTAACGTTAGCGAATGAAGTGATGGTTAAGCGTCTGGCTAAAGGGATCAGTGAGCAAGAACTGAATGAATACCAGCAAAACGTTCAGCGCAGCCTCGATATCCAACAGCGTAGCGTTCAACAATTAGCGAACACTATTGTAAATAGTCTTATTCAATATGACGATCCTGCAGCATGGACTGAGCAGGAGCAATTGTTGAAACAAATGACGGTAGAGAATGTTAACACTGCCGTTAAACAATATCTTTCTCATCCGGTAAATACTTATACCGGAGTATTATTGCCAAAATAA", - "dna_sequence_length": 2796, - "functions": [ - "putative periplasmic M16 family zinc metalloendopeptidase" - ], - "id": "CDS_1481", - "location": [ - [ - "NC_000913", - 1575202, - "-", - 2796 - ] - ], - "md5": "fc2a95392a1486d3c94146f36a934b9e", - "parent_gene": "", - "protein_md5": "df5ef317d3b1b72f30cdc46e72bcf1ad", - "protein_translation": "MEIIMRNLCFLLTLVATLLLPGRLIAAALPQDEKLITGQLDNGLRYMIYPHAHPKDQVNLWLQIHTGSLQEEDNELGVAHFVEHMMFNGTKTWPGNKVIETFESMGLRFGRDVNAYTSYDETVYQVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEVDAERGVITEEWRAHQDAKWRTSQARRPFLLANTRNLDREPIGLMDTVATVTPAQLRQFYQRWYQPNNMTFIVVGDIDSKEALALIKDNLSKLPANKAAENRVWPTKAENHLRFNIINDKENRVNGIALYYRLPMVQVNDEQSFIEQAEWSMLVQLFNQRLQERIQSGELKTISGGTARSVKIAPDYQSLFFRVNARDDNMQDAANALMAELATIDQHGFSAEELDDVKSTRLTWLKNAVDQQAERDLRMLTSRLASSSLNNTPFLSPEETYQLSKRLWQQITVQSLAEKWQQLRKNQDAFWEQMVNNEVAAKKALSPAAILALEKEYANKKLAAYVFPGRNLSLTVDADPQAEISSKETLAENLTSLTLSNGARVILAKSAGEEQKLQIIAVSNKGDLSFPAQQKSLIALANKAVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMNTLLSVSARTNNPEPGFQLINQRITHSTINDNIWASLQNAQIQALKTLDQRPAEKFAQQMYETRYADDRTKLLQENQIAQFTAADALAADRQLFSSPADITFVIVGNVAEDKLVALITRYLGSIKHSDSPLAAGKPLTRATDNASVTVKEQNEPVAQVSQWKRYDSRTPVNLPTRMALDAFNVALAKDLRVNIREQASGAYSVSSRLSVDPQAKDISHLLAFTCQPERHDELLTLANEVMVKRLAKGISEQELNEYQQNVQRSLDIQQRSVQQLANTIVNSLIQYDDPAAWTEQEQLLKQMTVENVNTAVKQYLSHPVNTYTGVLLPK", - "protein_translation_length": 931, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31827" - ], - [ - "gene_synonym", - "GeneID:945961" - ], - [ - "gene_synonym", - "JW1490" - ], - [ - "gene_synonym", - "EcoGene:EG11743" - ], - [ - "gene_synonym", - "b1495" - ], - [ - "gene_synonym", - "ASAP:ABE-0004982" - ], - [ - "gene_synonym", - "ECK1489" - ], - [ - "gene_synonym", - "GI:16129454" - ], - [ - "gene_synonym", - "yddB" - ], - [ - "gene_synonym", - "NP_416012.1" - ] - ], - "dna_sequence": "ATGAAGCGAGTTCTTATTCCTGGCGTCATTTTATGTGGCGCTGATGTGGCGCAGGCCGTCGATGACAAAAACATGTACATGCATTTTTTTGAAGAGATGACGGTCTATGCTCCTGTCCCTGTACCCGTAAACGGCAACACGCATTACACCAGTGAAAGCATCGAGCGTTTACCGACCGGGAATGGCAATATCAGCGATCTGCTGAGAACCAACCCTGCGGTACGCATGGATTCAACGCAAAGTACCTCGTTGAACCAGGGAGATATTCGCCCTGAGAAAATCTCTATTCACGGTGCGTCGCCCTACCAGAATGCCTATTTGATTGACGGTATTAGTGCAACTAATAACCTGAACCCAGCGAATGAGTCCGATGCCAGTAGTGCAACCAATATTAGCGGGATGTCACAGGGGTATTATCTTGATGTCAGCTTACTGGACAATGTGACGCTTTATGACAGTTTTGTGCCGGTTGAATTTGGTCGCTTCAATGGCGGGGTAATTGATGCAAAGATCAAACGCTTCAACGCTGATGATAGCAAGGTGAAATTGGGTTATCGCACTACGCGTTCGGACTGGTTAACATCGCATATCGATGAGAATAACAAGAGCGCATTTAATCAAGGCTCTTCAGGAAGTACTTATTACTCCCCAGATTTTAAAAAGAACTTTTATACCTTGTCGTTTAATCAGGAACTCGCTGATAACTTCGGCGTTACCGCCGGTTTATCGCGCCGCCAGTCTGATATCACCCGCGCGGATTATGTTTCGAATGACGGCATTGTCGCCGGTCGGGCACAGTATAAAAACGTTATCGATACTGCATTAAGCAAATTTACCTGGTTTGCCAGCGACCGCTTTACCCACGATTTAACCTTAAAATATACCGGCTCCAGCCGTGATTATAATACCAGCACCTTCCCGCAGTCTGATCGCGAAATGGGTAATAAATCCTATGGTCTGGCATGGGATATGGATACGCAGCTCGCATGGGCCAAACTGCGTACCACCGTTGGTTGGGATCATATTAGTGATTATACCCGTCACGATCATGACATCTGGTACACCGAACTTTCATGTACATATGGTGATATTACAGGGCGTTGCACCCGTGGCGGATTAGGACACATTTCCCAGGCTGTAGATAATTACACCTTCAAAACACGCCTGGACTGGCAAAAATTCGCCGTGGGTAATGTTTCGCATCAACCCTACTTCGGCGCGGAATACATCTATTCCGATGCGTGGACTGAACGCCATAACCAGTCTGAATCCTATGTGATTAATGCTGCCGGAAAGAAAACTAACCATACCATTTACCATAAAGGTAAAGGCCGCCTGGGAATTGACAACTACACGCTGTATATGGCGGATCGCATTAGCTGGCGTAATGTGTCATTAATGCCCGGCGTGCGGTATGACTATGACAACTATCTGTCAAACCACAATATCTCCCCGCGCTTTATGACGGAATGGGATATTTTTGCTAATCAAACCTCAATGATTACAGCAGGTTATAACCGTTACTATGGCGGGAATATTCTTGATATGGGATTACGTGATATCCGCAATAGCTGGACGGAATCGGTATCAGGTAATAAAACTCTGACGCGTTATCAGGATTTGAAAACGCCTTATAACGATGAACTGGCAATGGGATTGCAGCAGAAAATCGGTAAGAACGTTATTGCGCGTGCAAACTATGTTTACCGTGAAGCGCATGATCAAATCAGCAAAAGCAGTCGTACCGACAGCGCGACTAAAACCACCATTACTGAATATAACAACGATGGCAAAACCAAAACGCATTCGTTCAGCCTCAGTTTTGAACTGGCCGAACCCCTGCATATCCGCCAGGTAGATATTAACCCACAAATTGTCTTTAGCTATATCAAGAGCAAGGGCAACTTGTCGTTAAACAATGGTTATGAGGAGAGCAATACCGGTGATAACCAGGTGGTTTATAACGGTAATCTGGTCTCTTACGATAGCGTTCCAGTGGCAGATTTTAATAACCCATTAAAGATCTCCTTAAACATGGATTTCACGCATCAACCGAGCGGGTTAGTGTGGGCGAATACGCTGGCCTGGCAAGAAGCGCGTAAAGCTCGCATTATCCTTGGTAAGACAAATGCGCAATACATCAGCGAATATTCAGATTACAAGCAGTATGTTGACGAAAAACTGGATAGCAGCCTGACCTGGGACACCCGCTTGTCCTGGACGCCACAATTTCTGCAACAACAAAACCTGACGATCAGTGCCGATATTCTCAATGTACTGGATAGCAAAACCGCTGTTGATACAACGAACACCGGTGTGGCGACCTACGCCAGTGGCCGTACTTTCTGGCTTGATGTCAGCATGAAATTTTAA", - "dna_sequence_length": 2373, - "functions": [ - "putative TonB-dependent outer membrane receptor" - ], - "id": "CDS_1482", - "location": [ - [ - "NC_000913", - 1577619, - "-", - 2373 - ] - ], - "md5": "5823ad0e14b5f0c01ca0bec7a8b569b8", - "parent_gene": "", - "protein_md5": "23330dd331dafb332dcbcd0c9344a149", - "protein_translation": "MKRVLIPGVILCGADVAQAVDDKNMYMHFFEEMTVYAPVPVPVNGNTHYTSESIERLPTGNGNISDLLRTNPAVRMDSTQSTSLNQGDIRPEKISIHGASPYQNAYLIDGISATNNLNPANESDASSATNISGMSQGYYLDVSLLDNVTLYDSFVPVEFGRFNGGVIDAKIKRFNADDSKVKLGYRTTRSDWLTSHIDENNKSAFNQGSSGSTYYSPDFKKNFYTLSFNQELADNFGVTAGLSRRQSDITRADYVSNDGIVAGRAQYKNVIDTALSKFTWFASDRFTHDLTLKYTGSSRDYNTSTFPQSDREMGNKSYGLAWDMDTQLAWAKLRTTVGWDHISDYTRHDHDIWYTELSCTYGDITGRCTRGGLGHISQAVDNYTFKTRLDWQKFAVGNVSHQPYFGAEYIYSDAWTERHNQSESYVINAAGKKTNHTIYHKGKGRLGIDNYTLYMADRISWRNVSLMPGVRYDYDNYLSNHNISPRFMTEWDIFANQTSMITAGYNRYYGGNILDMGLRDIRNSWTESVSGNKTLTRYQDLKTPYNDELAMGLQQKIGKNVIARANYVYREAHDQISKSSRTDSATKTTITEYNNDGKTKTHSFSLSFELAEPLHIRQVDINPQIVFSYIKSKGNLSLNNGYEESNTGDNQVVYNGNLVSYDSVPVADFNNPLKISLNMDFTHQPSGLVWANTLAWQEARKARIILGKTNAQYISEYSDYKQYVDEKLDSSLTWDTRLSWTPQFLQQQNLTISADILNVLDSKTAVDTTNTGVATYASGRTFWLDVSMKF", - "protein_translation_length": 790, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5242" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31826" - ], - [ - "gene_synonym", - "EcoGene:EG11742" - ], - [ - "gene_synonym", - "ASAP:ABE-0004984" - ], - [ - "gene_synonym", - "b1496" - ], - [ - "gene_synonym", - "GeneID:945945" - ], - [ - "gene_synonym", - "NP_416013.1" - ], - [ - "gene_synonym", - "GI:16129455" - ], - [ - "gene_synonym", - "ECK1490" - ], - [ - "gene_synonym", - "yddA" - ] - ], - "dna_sequence": "ATGATAACCATTCCCATTACGCTTCGTATGTTGATAGCAAAGTATCTCTGTCTGTTGAAGCCCTTTTGGCTGCGTAAGAATAATAAAACTTCAGTGTTGTTAATCATTATTATCCTCGCCATGATCCTTGGCGTGGTTAAAATTCAGGTCTGGTTAAACGACTGGAATAATGATTTTTTCAATGCGCTAAGCCAGAAAGAAACCGATAAGCTTTGGCAGCTTGTCCTTTGGTTCCCTGCCCTGCTGGGGATCTTTGTATTAATATCCGTAAACAAAACATGGTTAATTAAACTACTGACTATTCGCTGGCGCGAATGGTTAACAGATTACTACCTTAATCGGTGGTTTGCAGATAAAAACTACTACTTCACGCAGATCTACGGCGAGCATAAAAATACAGATAACCCTGACCAACGTATCGCTGAAGACATTCTCTTACTGATCAGCAAAACGCTCAGTCTTTCATTTGGCTTCATCCAGTCACTTAGCATGCTGATCACCTTTACCGTTATTCTTTGGGAAAGCGCGGGTACGCTCTCATTCACTGTTGGTGGAACAGAATGGAATATCCAGGGGTATATGGTCTATACCGTCGTGCTCATTGTGATCGGTGGAACTTTATTTACCCATAAGGTGGGTAAACGTATTCGTCCGCTTAATGTGGAAAAACAACGTAGCGAAGCGACATTTCGAACAAATCTTGTGCAGCATAATAAGCAGGCAGAACTGATTGCGCTAAGCAATGCTGAGTCTCTACAACGCCAGGAGTTGAGCGACAATTTTCATACCATTAAAGAGAACTGGCATCGTTTAATGAATCGTCAGCGGTGGCTTGATTACTGGCAGAATATTTATTCGCGCTCGCTTAGCGTTCTTCCCTACTTTCTGTTATTGCCGCAGTTTATTAGCGGGCAGATCAATCTGGGCGGACTGATGAAATCGCGCCAGGCATTTATGCTGGTATCGAACAATTTAAGCTGGTTTATTTATAAATATGACGAACTTGCTGAACTGGCTGCGGTTATCGATCGCTTGTATGAGTTCCATCAACTCACTGAACAGCGCCCTACGAATAAGCCTAAAAATTGCCAACATGCGGTACAAGTGGCTGATGCGAGTATTCGTACGCCTGATAATAAGATCATATTAGAGAACCTGAACTTTCATGTTTCGCCAGGCAAATGGCTATTACTGAAAGGCTACTCTGGCGCGGGAAAAACCACACTGCTTAAAACATTATCCCACTGCTGGCCGTGGTTTAAAGGTGATATTTCTTCTCCTGCTGACAGTTGGTATGTGTCACAAACACCGTTAATCAAAACCGGCTTACTGAAAGAGATTATTTGTAAAGCACTTCCCCTGCCCGTAGACGATAAATCGTTGAGCGAAGTACTGCATCAGGTTGGTCTTGGGAAATTGGCTGCGCGTATTCATGACCACGATCGCTGGGGAGATATTCTTTCCAGCGGCGAAAAACAACGTATCGCCCTGGCACGATTAATTTTACGACGTCCGAAATGGATATTTCTTGACGAAACTACCTCTCATCTTGAGGAACAAGAGGCTATCCGCTTACTGCGTTTAGTGCGTGAAAAACTACCCACAAGCGGCGTCATTATGGTTACACATCAACCCGGTGTCTGGAACCTGGCCGATGATATTTGTGACATTAGCGCGGTTTTATAA", - "dna_sequence_length": 1686, - "functions": [ - "putative multidrug ABC transporter permease/ATPase" - ], - "id": "CDS_1483", - "location": [ - [ - "NC_000913", - 1579342, - "-", - 1686 - ] - ], - "md5": "6b18d63554943e60bd36a9db4f66a80c", - "parent_gene": "", - "protein_md5": "7cffa8a99a1213b1df7377350cc0dcfa", - "protein_translation": "MITIPITLRMLIAKYLCLLKPFWLRKNNKTSVLLIIIILAMILGVVKIQVWLNDWNNDFFNALSQKETDKLWQLVLWFPALLGIFVLISVNKTWLIKLLTIRWREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQSLSMLITFTVILWESAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRPLNVEKQRSEATFRTNLVQHNKQAELIALSNAESLQRQELSDNFHTIKENWHRLMNRQRWLDYWQNIYSRSLSVLPYFLLLPQFISGQINLGGLMKSRQAFMLVSNNLSWFIYKYDELAELAAVIDRLYEFHQLTEQRPTNKPKNCQHAVQVADASIRTPDNKIILENLNFHVSPGKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDISSPADSWYVSQTPLIKTGLLKEIICKALPLPVDDKSLSEVLHQVGLGKLAARIHDHDRWGDILSSGEKQRIALARLILRRPKWIFLDETTSHLEEQEAIRLLRLVREKLPTSGVIMVTHQPGVWNLADDICDISAVL", - "protein_translation_length": 561, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111285" - ], - [ - "gene_synonym", - "JW1492" - ], - [ - "gene_synonym", - "ASAP:ABE-0004986" - ], - [ - "gene_synonym", - "b1497" - ], - [ - "gene_synonym", - "NP_416014.4" - ], - [ - "gene_synonym", - "GeneID:945981" - ], - [ - "gene_synonym", - "ydeM" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76134" - ], - [ - "gene_synonym", - "EcoGene:EG13795" - ], - [ - "gene_synonym", - "ECK1491" - ] - ], - "dna_sequence": "ATGCACGTTACAGCCAAGCCCTCCAGTTTTCAATGTAATCTCAAATGTGATTACTGTTTTTACCTTGAAAAAGAGTCGCAGTTTACTCATGAAAAATGGATGGATGACAGCACTCTGAAAGAGTTCATCAAACAATATATCGCAGCGTCTGGCAATCAGGTCTATTTTACCTGGCAAGGCGGTGAACCCACTCTGGCTGGCCTGGATTTTTTCCGTAAAGTTATTCACTATCAACAACGCTATGCAGGCCAAAAACGTATTTTTAATGCATTACAAACGAATGGCATTTTATTGAATAATGAATGGTGTGCCTTTCTCAAAGAACATGAATTTCTGGTTGGTATCTCGATCGATGGCCCCCAGGAGTTACATGACCGTTACAGACGCAGTAATTCAGGTAACGGTACTTTTGCAAAAGTGATAGCAGCCATCGAGCGTCTGAAATCATATCAAGTAGAGTTTAATACGTTAACCGTCATTAATAACGTTAATGTCCATTACCCTCTTGAGGTTTATCATTTTTTAAAATCTATCGGCAGTAAACATATGCAATTTATCGAATTGCTAGAAACCGGGACGCCGAATATTGATTTCAGTGGTCATAGTGAGAACACATTCCGTATCATTGATTTTTCTGTGCCTCCCACGGCTTATGGCAAGTTTATGTCAACCATTTTTATGCAATGGGTTAAAAACGATGTGGGTGAAATTTTCATCCGTCAGTTTGAAAGCTTTGTCAGCCGTTTTTTGGGGAATGGGCATACCAGTTGTATTTTCCAGGAGTCCTGCAAGGATAATCTGGTTGTTGAAAGTAATGGAGACATTTACGAATGCGACCATTTTGTCTATCCACAGTACAAAATTGGAAACATTAATAAATCTGAACTCAAAACGATGAACAGTGTACAACTGACAGCGCAAAAAAAACGGATTCCAGCGAAATGTCAGCAATGTGCATATAAACCTATCTGCAATGGCGGTTGTCCTAAGCATCGTATTACTAAAGTAAACAATGAGACTGTTTCTTATTTTTGCGAAGGTTATAAAATCCTTTTTTCAACCATGGTACCTTATATGAACGCCATGGTAGAGTTAGCTAAGAACAGAGTACCGCTTTACCACATTATGGATGTTGCAAAACAAATGGAGAATAATTAA", - "dna_sequence_length": 1158, - "functions": [ - "putative YdeN-specific sulfatase-maturating enzyme" - ], - "id": "CDS_1484", - "location": [ - [ - "NC_000913", - 1580790, - "-", - 1158 - ] - ], - "md5": "cbcabafa6d70a2f5cd2e0bad56f080d8", - "parent_gene": "", - "protein_md5": "11d7a823980792f6044f71ff0973fa65", - "protein_translation": "MHVTAKPSSFQCNLKCDYCFYLEKESQFTHEKWMDDSTLKEFIKQYIAASGNQVYFTWQGGEPTLAGLDFFRKVIHYQQRYAGQKRIFNALQTNGILLNNEWCAFLKEHEFLVGISIDGPQELHDRYRRSNSGNGTFAKVIAAIERLKSYQVEFNTLTVINNVNVHYPLEVYHFLKSIGSKHMQFIELLETGTPNIDFSGHSENTFRIIDFSVPPTAYGKFMSTIFMQWVKNDVGEIFIRQFESFVSRFLGNGHTSCIFQESCKDNLVVESNGDIYECDHFVYPQYKIGNINKSELKTMNSVQLTAQKKRIPAKCQQCAYKPICNGGCPKHRITKVNNETVSYFCEGYKILFSTMVPYMNAMVELAKNRVPLYHIMDVAKQMENN", - "protein_translation_length": 385, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5243" - ], - [ - "gene_synonym", - "b1498" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77318" - ], - [ - "gene_synonym", - "ASAP:ABE-0004988" - ], - [ - "gene_synonym", - "GeneID:945957" - ], - [ - "gene_synonym", - "NP_416015.2" - ], - [ - "gene_synonym", - "ydeN" - ], - [ - "gene_synonym", - "GI:90111286" - ], - [ - "gene_synonym", - "EcoGene:EG13796" - ], - [ - "gene_synonym", - "ECK1492" - ] - ], - "dna_sequence": "ATGAAGTCTGCATTAAAGAAAAGTGTCGTAAGTACCTCGATATCTTTGATACTGGCATCTGGTATGGCTGCATTTGCTGCTCATGCGGCAGATGATGTAAAGCTGAAAGCAACCAAAACAAACGTTGCTTTCTCAGACTTTACGCCGACAGAATACAGTACCAAAGGAAAGCCAAATATTATCGTACTGACCATGGATGATCTTGGTTATGGACAACTTCCTTTTGATAAGGGATCTTTTGACCCAAAAACAATGGAAAATCGTGAAGTTGTCGATACCTACAAAATAGGGATAGATAAAGCCATTGAAGCTGCACAAAAATCAACGCCGACGCTCCTTTCATTAATGGATGAAGGCGTACGTTTTACTAACGGCTATGTGGCACACGGTGTTTCCGGCCCCTCCCGCGCCGCAATAATGACCGGTCGAGCTCCCGCCCGCTTTGGTGTCTATTCCAATACCGATGCTCAGGATGGTATTCCGCTAACAGAAACTTTCTTGCCTGAATTATTCCAGAATCATGGTTATTACACTGCAGCAGTAGGTAAATGGCACTTGTCAAAAATCAGTAATGTGCCGGTACCGGAAGATAAACAAACGCGTGACTATCATGACAACTTCACCACATTTTCTGCGGAAGAATGGCAACCTCAAAACCGTGGCTTTGATTACTTTATGGGATTCCACGCTGCAGGAACGGCATATTACAACTCCCCTTCACTGTTCAAAAATCGTGAACGTGTCCCCGCAAAAGGTTATATCAGCGATCAGTTAACCGATGAGGCAATTGGCGTTGTTGATCGTGCCAAAACACTTGACCAGCCTTTTATGCTTTACCTGGCTTATAATGCTCCGCACCTGCCAAATGATAATCCTGCACCGGATCAATATCAGAAGCAATTTAATACCGGTAGTCAAACAGCAGATAACTACTACGCTTCCGTTTATTCTGTTGATCAGGGTGTAAAACGCATTCTCGAACAACTGAAGAAAAACGGACAGTATGACAATACAATTATTCTCTTTACCTCCGATAATGGTGCGGTTATCGATGGTCCTCTGCCGCTGAACGGGGCGCAAAAAGGCTATAAGAGTCAGACCTATCCTGGCGGTACTCACACCCCAATGTTTATGTGGTGGAAAGGAAAACTTCAACCCGGTAATTATGACAAGCTGATTTCCGCAATGGATTTCTACCCGACAGCTCTTGATGCAGCCGATATCAGCATTCCAAAAGACCTTAAGCTGGATGGCGTTTCCTTGCTGCCCTGGTTGCAAGATAAGAAACAAGGCGAGCCACATAAAAATCTGACCTGGATAACCTCTTATTCTCACTGGTTTGACGAGGAAAATATTCCATTCTGGGATAATTACCACAAATTTGTTCGCCATCAGTCAGACGATTACCCGCATAACCCCAACACTGAGGACTTAAGCCAATTCTCTTATACGGTGAGAAATAACGATTATTCGCTTGTCTATACAGTAGAAAACAATCAGTTAGGTCTCTACAAACTGACGGATCTACAGCAAAAAGATAACCTTGCCGCCGCCAATCCGCAGGTCGTTAAAGAGATGCAAGGCGTGGTAAGAGAGTTTATCGACAGCAGCCAGCCACCGCTTAGCGAGGTAAATCAGGAGAAGTTTAACAATATCAAGAAAGCACTAAGCGAAGCGAAATAA", - "dna_sequence_length": 1683, - "functions": [ - "putative Ser-type periplasmic non-aryl sulfatase" - ], - "id": "CDS_1485", - "location": [ - [ - "NC_000913", - 1582524, - "-", - 1683 - ] - ], - "md5": "3504d76122722bfc9755ff07e8131d2f", - "parent_gene": "", - "protein_md5": "c604398bf9746ecd834ebe5d93da79ac", - "protein_translation": "MKSALKKSVVSTSISLILASGMAAFAAHAADDVKLKATKTNVAFSDFTPTEYSTKGKPNIIVLTMDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAIEAAQKSTPTLLSLMDEGVRFTNGYVAHGVSGPSRAAIMTGRAPARFGVYSNTDAQDGIPLTETFLPELFQNHGYYTAAVGKWHLSKISNVPVPEDKQTRDYHDNFTTFSAEEWQPQNRGFDYFMGFHAAGTAYYNSPSLFKNRERVPAKGYISDQLTDEAIGVVDRAKTLDQPFMLYLAYNAPHLPNDNPAPDQYQKQFNTGSQTADNYYASVYSVDQGVKRILEQLKKNGQYDNTIILFTSDNGAVIDGPLPLNGAQKGYKSQTYPGGTHTPMFMWWKGKLQPGNYDKLISAMDFYPTALDAADISIPKDLKLDGVSLLPWLQDKKQGEPHKNLTWITSYSHWFDEENIPFWDNYHKFVRHQSDDYPHNPNTEDLSQFSYTVRNNDYSLVYTVENNQLGLYKLTDLQQKDNLAAANPQVVKEMQGVVREFIDSSQPPLSEVNQEKFNNIKKALSEAK", - "protein_translation_length": 560, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1499" - ], - [ - "gene_synonym", - "JW1494" - ], - [ - "gene_synonym", - "GeneID:945922" - ], - [ - "gene_synonym", - "ydeO" - ], - [ - "gene_synonym", - "GI:16129458" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76135" - ], - [ - "gene_synonym", - "EcoGene:EG13797" - ], - [ - "gene_synonym", - "NP_416016.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0004992" - ], - [ - "gene_synonym", - "ECK1493" - ] - ], - "dna_sequence": "ATGTCGCTCGTTTGTTCTGTTATATTTATTCATCATGCCTTCAACGCTAACATTTTAGATAAAGATTACGCCTTCTCTGACGGCGAGATCCTGATGGTAGATAACGCTGTTCGTACGCATTTTGAACCTTATGAGCGGCATTTTAAAGAGATCGGATTTACTGAAAATACCATTAAAAAATATCTACAATGCACTAACATCCAGACAGTGACGGTGCCTGTTCCTGCGAAGTTTTTACGTGCTTCAAATGTACCGACTGGATTGCTTAATGAAATGATTGCTTATCTCAACTCGGAAGAACGCAATCATCATAATTTTTCAGAACTTTTGCTTTTTTCTTGCCTGTCTATTTTTGCCGCATGCAAAGGTTTCATTACACTATTAACTAACGGTGTGCTATCCGTTTCTGGGAAAGTGAGAAATATTGTCAACATGAAGCCGGCGCACCCATGGAAGCTGAAAGATATTTGTGACTGCCTGTACATCAGTGAAAGCCTGTTGAAGAAAAAACTTAAGCAAGAGCAAACGACATTCTCACAGATTCTTTTAGATGCAAGAATGCAGCACGCAAAAAATTTGATACGCGTAGAAGGTTCAGTCAATAAAATTGCCGAACAATGTGGTTATGCCAGTACATCTTATTTTATTTATGCGTTCCGCAAACATTTCGGCAACAGTCCGAAGAGAGTTTCTAAGGAGTACCGTTGTCAAAGTCACACGGGTATGAATACGGGCAACACGATGAATGCTTTAGCTATTTGA", - "dna_sequence_length": 762, - "functions": [ - "UV-inducible global regulator, EvgA-, GadE-dependent" - ], - "id": "CDS_1486", - "location": [ - [ - "NC_000913", - 1583687, - "-", - 762 - ] - ], - "md5": "2182223141f739424f3b05abf3ba537b", - "parent_gene": "", - "protein_md5": "708dfdb2806673304fce02223e94fba4", - "protein_translation": "MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFTENTIKKYLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEERNHHNFSELLLFSCLSIFAACKGFITLLTNGVLSVSGKVRNIVNMKPAHPWKLKDICDCLYISESLLKKKLKQEQTTFSQILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVSKEYRCQSHTGMNTGNTMNALAI", - "protein_translation_length": 253, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14466" - ], - [ - "gene_synonym", - "ECK4475" - ], - [ - "gene_synonym", - "safA" - ], - [ - "gene_synonym", - "GI:16129459" - ], - [ - "gene_synonym", - "b1500" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76136" - ], - [ - "gene_synonym", - "yneN" - ], - [ - "gene_synonym", - "NP_416017.1" - ], - [ - "gene_synonym", - "GeneID:946061" - ] - ], - "dna_sequence": "ATGCATGCGACCACAGTGAAAAACAAAATCACGCAAAGAGACAACTATAAAGAAATCATGTCTGCAATTGTGGTTGTCTTATTACTGACACTTACGTTGATAGCCATTTTTTCGGCAATTGATCAGCTGAGTATTTCAGAAATGGGTCGCATTGCAAGAGATCTTACACATTTCATTATCAATAGTTTGCAAGGCTGA", - "dna_sequence_length": 198, - "functions": [ - "two-component system connector membrane protein, EvgSA to PhoQP" - ], - "id": "CDS_1487", - "location": [ - [ - "NC_000913", - 1583959, - "-", - 198 - ] - ], - "md5": "aae0de6481bd5e1da8e545233d4f8425", - "parent_gene": "", - "protein_md5": "833a468d6a2f92708e4cf1789c8123d1", - "protein_translation": "MHATTVKNKITQRDNYKEIMSAIVVVLLLTLTLIAIFSAIDQLSISEMGRIARDLTHFIINSLQG", - "protein_translation_length": 65, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005001" - ], - [ - "gene_synonym", - "JW1495" - ], - [ - "gene_synonym", - "ydeP" - ], - [ - "gene_synonym", - "GI:16129460" - ], - [ - "gene_synonym", - "b1501" - ], - [ - "gene_synonym", - "NP_416018.1" - ], - [ - "gene_synonym", - "ECK1494" - ], - [ - "gene_synonym", - "GeneID:946055" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77561" - ], - [ - "gene_synonym", - "EcoGene:EG13798" - ] - ], - "dna_sequence": "ATGAAGAAAAAAATTGAATCCTACCAGGGTGCTGCAGGTGGTTGGGGTGCTGTTAAATCCGTAGCGAATGCAGTACGTAAGCAGATGGATATACGCCAGGATGTTATTGCCATGTTTGACATGAATAAGCCAGAGGGCTTTGACTGTCCGGGTTGTGCATGGCCAGATCCTAAGCACAGTGCGTCATTCGACATTTGTGAAAACGGCGCAAAAGCAATCGCCTGGGAAGTCACGGATAAGCAGGTAAACGCCTCTTTCTTTGCTGAGAATACGGTTCAATCATTACTTACCTGGGGAGACCACGAGCTTGAGGCTGCGGGGCGACTCACTCAGCCTTTGAAATATGATGCCGTCAGCGACTGTTACAAGCCATTAAGCTGGCAACAAGCTTTCGACGAAATTGGCGCACGCCTTCAAAGCTATAGTGATCCCAATCAGGTTGAATTCTATACTTCGGGCCGCACTTCCAATGAAGCTGCCTTTCTTTATCAGCTTTTTGCCCGTGAATACGGGAGCAATAACTTTCCCGACTGCTCCAACATGTGCCATGAACCGACAAGCGTGGGTTTGGCAGCGAGTATCGGTGTAGGTAAAGGGACCGTGTTGCTGGAAGACTTTGAGAAGTGCGATTTAGTCATTTGCATTGGGCATAACCCTGGTACAAACCACCCTCGCATGCTGACTTCGTTGCGCGCTTTAGTGAAACGGGGAGCGAAAATGATCGCCATCAATCCTCTACAGGAACGTGGCCTGGAGCGATTTACCGCACCGCAAAACCCGTTTGAAATGCTGACGAACTCTGAGACTCAGTTGGCCAGTGCCTACTATAACGTGCGCATTGGTGGCGATATGGCGTTGCTCAAGGGGATGATGCGCCTGTTAATTGAGCGCGATGATGCTGCAAGCGCCGCAGGTCGGCCTTCATTGCTTGATGACGAGTTTATTCAAACGCATACCGTCGGCTTTGACGAGCTACGCCGTGACGTTCTCAATTCCGAGTGGAAAGATATCGAACGTATTTCTGGACTAAGTCAGACACAAATCGCCGAACTGGCTGACGCATATGCCGCTGCCGAACGCACCATTATCTGTTACGGAATGGGGATCACTCAGCACGAACATGGTACCCAGAACGTACAGCAACTGGTCAATCTGCTGTTGATGAAAGGTAACATTGGCAAGCCTGGTGCGGGTATCTGCCCACTACGTGGACACTCTAATGTACAGGGCGACCGAACCGTCGGTATCACCGAGAAACCGTCTGCAGAGTTTCTGGCTCGTCTGGGTGAGCGCTATGGCTTCACCCCACCTCATGCACCTGGACATGCTGCAATTGCCAGCATGCAAGCAATATGTACGGGGCAGGCTCGAGCATTGATCTGCATGGGGGGCAATTTTGCGCTGGCAATGCCAGATCGGGAAGCGAGCGCTGTACCGTTAACGCAATTAGATTTGGCGGTACACGTAGCCACTAAGCTTAACCGCTCTCATCTGTTGACCGCACGGCATAGCTATATTCTGCCGGTCCTGGGACGTAGCGAGATTGACATGCAAAAAAACGGTGCGCAGGCGGTAACCGTTGAGGATTCAATGTCGATGATTCATGCCTCGCGTGGCGTGTTAAAACCCGCCGGTGTAATGCTGAAATCAGAGTGTGCAGTGGTCGCGGGAATCGCGCAGGCAGCACTACCCCAGAGCGTGGTAGCCTGGGAGTATCTGGTGGAAGATTATGATCGCATTCGCAATGACATTGAAGCTGTGCTGCCAGAGTTCGCCGACTATAACCAGCGCATCCGTCATCCCGGTGGTTTTCACCTGATAAATGCAGCTGCTGAAAGGCGCTGGATGACGCCGTCAGGTAAGGCTAATTTCATTACCAGCAAAGGGCTGTTAGAAGATCCCTCTTCAGCGTTTAACAGTAAGCTGGTCATGGCGACAGTACGCAGCCACGATCAGTACAACACGACGATTTATGGTATGGATGATCGCTATCGAGGGGTATTCGGTCAACGAGATGTGGTCTTTATGAGTGCTAAACAAGCTAAAATTTGCCGTGTAAAAAACGGCGAAAGAGTTAATCTTATTGCGCTTACGCCAGACGGTAAGCGCAGCTCACGCCGCATGGATAGATTAAAAGTGGTCATTTACCCTATGGCTGACCGCTCACTGGTGACCTATTTTCCAGAATCGAATCACATGCTAACACTTGATAACCACGATCCATTAAGTGGCATTCCTGGCTATAAAAGTATTCCGGTTGAATTAGAACCATCAAATTAA", 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"MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKPEGFDCPGCAWPDPKHSASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHELEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAAFLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHNPGTNHPRMLTSLRALVKRGAKMIAINPLQERGLERFTAPQNPFEMLTNSETQLASAYYNVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEWKDIERISGLSQTQIAELADAYAAAERTIICYGMGITQHEHGTQNVQQLVNLLLMKGNIGKPGAGICPLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPHAPGHAAIASMQAICTGQARALICMGGNFALAMPDREASAVPLTQLDLAVHVATKLNRSHLLTARHSYILPVLGRSEIDMQKNGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQAALPQSVVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTPSGKANFITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAKICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMADRSLVTYFPESNHMLTLDNHDPLSGIPGYKSIPVELEPSN", - "protein_translation_length": 759, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1496" - ], - [ - "gene_synonym", - "NP_416019.1" - ], - [ - "gene_synonym", - "GI:16129461" - ], - [ - "gene_synonym", - "ydeQ" - ], - [ - "gene_synonym", - "fmlD" - ], - [ - "gene_synonym", - "EcoGene:EG13799" - ], - [ - "gene_synonym", - "b1502" - ], - [ - "gene_synonym", - "ECK1495" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77588" - ], - [ - "gene_synonym", - "GeneID:946050" - ], - [ - "gene_synonym", - "ASAP:ABE-0005006" - ] - ], - "dna_sequence": "ATGGGTAAAACAATCAGTATAAAGGTCCTGTTCGGTATTTATCTTCTATTAATGGCAGGCAAAGTTTTTGCCTTCAGTTGTAATGTCGATGGCGGGTCAAGTATTGGAGCAGGTACAACCTCTGTTTATGTTAATCTCGACCCTGTAATACAGCCGGGCCAGAATCTGGTTGTAGACTTGTCTCAGCATATAAGTTGCTGGAATGATTACGGCGGCTGGTACGACACTGATCATATAAACCTGGTACAAGGCTCAGCTTTCGCAGGCTCCCTACAGTCATATAAAGGATCGCTGTACTGGAATAATGTGACCTACCCCTTCCCGTTGACGACAAATACCAACGTATTGGATATTGGTGATAAGACACCGATGCCATTACCGTTAAAACTCTATATTACCCCAGTTGGGGCGGCCGGTGGAGTTGTCATAAAAGCGGGGGAAGTCATTGCCCGTATTCATATGTATAAAATTGCAACATTAGGAAGCGGAAATCCGCGTAATTTTACGTGGAATATTATTTCAAATAACAATGTTGTTATGCCAACAGGCGGCTGCACCGTTGATAGTCGAAATGTCACCGTGGATCTCCCGGACTTTCCTGGAAGCGCAGAAATACCCCTTGGCGTATATTGCTCAAGCGAACAAAAGCTCTCATTTTATCTTTCGGGTGCCACCACTGACAGTAGCCGACAAGTGTTTGCTAACACAGCACCTGATGCAACAAAAGCATCGGGAGTGGGTGTCACTCTAATGCGTAATGGAAAAATACTGGCTACGGGAGAAAATGTCTCCCTGGGGACAGTAAATAAAAGCAAAGTACCTCTGGGTTTAAGCGCAACCTATGGACAAACAGGAAACAAGGTTTCAGCCGGAACCGTCCAGTCAGTCATTGGTGTCACTTTTATCTATGAATAA", - "dna_sequence_length": 915, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_1489", - "location": [ - [ - "NC_000913", - 1587734, - "-", - 915 - ] - ], - "md5": "92a230a40057230e2062c12cc5f0d988", - "parent_gene": "", - "protein_md5": "0a50178ff3d18640e45a8353e3223d29", - "protein_translation": "MGKTISIKVLFGIYLLLMAGKVFAFSCNVDGGSSIGAGTTSVYVNLDPVIQPGQNLVVDLSQHISCWNDYGGWYDTDHINLVQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGDKTPMPLPLKLYITPVGAAGGVVIKAGEVIARIHMYKIATLGSGNPRNFTWNIISNNNVVMPTGGCTVDSRNVTVDLPDFPGSAEIPLGVYCSSEQKLSFYLSGATTDSSRQVFANTAPDATKASGVGVTLMRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGNKVSAGTVQSVIGVTFIYE", - "protein_translation_length": 304, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1497" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77294" - ], - [ - "gene_synonym", - "ASAP:ABE-0005008" - ], - [ - "gene_synonym", - "ydeR" - ], - [ - "gene_synonym", - "EcoGene:EG13800" - ], - [ - "gene_synonym", - "b1503" - ], - [ - "gene_synonym", - "GeneID:946049" - ], - [ - "gene_synonym", - "NP_416020.1" - ], - [ - "gene_synonym", - "GI:16129462" - ], - [ - "gene_synonym", - "ECK1496" - ] - ], - "dna_sequence": "ATGAAAAGACTTCACAAGAGGTTCCTGTTAGCTACGTTTTGCGCGTTATTCACAGCAACTCTCCAGGCCGCCGATGTCACTATCACTGTTAATGGTCGGGTAGTCGCTAAACCCTGCACTATTCAAACCAAAGAAGCTAACGTTAATCTCGGGGATCTTTATACGCGCAATCTGCAACAACCTGGTTCTGCATCTGGCTGGCACAATATTACTTTGTCATTAACCGATTGTCCGGTTGAAACAAGTGCAGTGACGGCAATCGTGACAGGTTCAACTGACAATACGGGTTATTACAAAAATGAAGGTACTGCCGAAAATATTCAGATAGAGCTGAGGGATGACCAGGATGCTGCGTTAAAAAATGGCGATAGCAAAACGGTTATTGTTGATGAGATCACTCGTAATGCACAGTTTCCACTTAAGGCAAGAGCTATCACGGTGAATGGAAACGCAAGCCAGGGAACGATCGAGGCGCTAATCAATGTGATCTACACCTGGCAATAA", - "dna_sequence_length": 504, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_1490", - "location": [ - [ - "NC_000913", - 1588296, - "-", - 504 - ] - ], - "md5": "64ae273c946b63a4c5795049ecf41ee6", - "parent_gene": "", - "protein_md5": "489cef56c8a109bae25ce4fa8c5480b5", - "protein_translation": "MKRLHKRFLLATFCALFTATLQAADVTITVNGRVVAKPCTIQTKEANVNLGDLYTRNLQQPGSASGWHNITLSLTDCPVETSAVTAIVTGSTDNTGYYKNEGTAENIQIELRDDQDAALKNGDSKTVIVDEITRNAQFPLKARAITVNGNASQGTIEALINVIYTWQ", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1497" - ], - [ - "gene_synonym", - "NP_416021.1" - ], - [ - "gene_synonym", - "JW1498" - ], - [ - "gene_synonym", - "ydeS" - ], - [ - "gene_synonym", - "b1504" - ], - [ - "gene_synonym", - "ASAP:ABE-0005013" - ], - [ - "gene_synonym", - "EcoGene:EG13801" - ], - [ - "gene_synonym", - "GeneID:946047" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77789" - ], - [ - "gene_synonym", - "GI:16129463" - ] - ], - "dna_sequence": "ATGAAATACAATAACATTATTTTCCTCGGTTTATGTCTGGGGTTAACCACCTATTCTGCTTTATCCGCAGATAGCGTTATTAAAATTAGCGGGCGCGTCCTCGATTATGGCTGCACAGTCTCATCGGATTCGCTTAATTTTACCGTAGATCTCCAAAAAAACAGTGCCAGACAATTTCCAACGACCGGTAGCACAAGTCCAGCCGTCCCTTTTCAGATTACGTTAAGTGAATGCAGCAAAGGGACAACGGGGGTTCGGGTTGCATTTAACGGTATTGAGGATGCAGAAAATAATACTTTGTTGAAACTGGATGAAGGAAGCAATACGGCCTCCGGTTTGGGTATAGAAATATTGGACGCAAATATGCGTCCGGTGAAACTGAATGATCTTCATGCCGGGATGCAGTGGATCCCACTGGTACCAGAACAGAACAATATTTTGCCTTACTCCGCTCGTCTGAAGTCAACTCAGAAGTCCGTCAATCCGGGACTGGTGAGGGCTTCGGCAACCTTTACCCTTGAATTTCAATAA", - "dna_sequence_length": 531, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_1491", - "location": [ - [ - "NC_000913", - 1588839, - "-", - 531 - ] - ], - "md5": "73b0baf90e9dd8dd9cd344c2d88eadf5", - "parent_gene": "", - "protein_md5": "9e1ed699f27e4c1b95bbfc96c69d56de", - "protein_translation": "MKYNNIIFLGLCLGLTTYSALSADSVIKISGRVLDYGCTVSSDSLNFTVDLQKNSARQFPTTGSTSPAVPFQITLSECSKGTTGVRVAFNGIEDAENNTLLKLDEGSNTASGLGIEILDANMRPVKLNDLHAGMQWIPLVPEQNNILPYSARLKSTQKSVNPGLVRASATFTLEFQ", - "protein_translation_length": 176, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005017" - ], - [ - "gene_synonym", - "ydeT" - ], - [ - "gene_synonym", - "JW1499" - ], - [ - "gene_synonym", - "EcoGene:EG13802" - ], - [ - "gene_synonym", - "b1505" - ], - [ - "gene_synonym", - "fmlC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76137" - ], - [ - "gene_synonym", - "ECK1498" - ], - [ - "gene_synonym", - "GeneID:946042" - ] - ], - "dna_sequence": "GGAACCAATATCCAGGTCGCAGGATATCGCTATTCTACGCAAGGTTTTTATAACTTATCCGACAGTGCCTACAGTCGAATGAGTGGTTACACCGTCAAGCCTCCTACCGGAGACACCAATGAGCAGACACAATTTATTGATTATTTTAATCTGTTCTACAGTAAGCGTGGTCAGGAACAAATAAGCATCTCTCAGCAGCTTGGAAATTACGGTACGACATTTTTCAGTGCCAGTCGCCAAAGTTACTGGAACACGTCACGCAGCGACCAGCAAATATCATTTGGATTAAATGTGCCGTTTGGTGATATTACGACTTCGCTGAATTACAGCTATTCCAATAATATATGGCAAAACGATCGGGATCATTTACTCGCTTTTACGCTTAATGTTCCCTTCAGTCATTGGATGCGTACAGACAGTCAGTCGGCATTTCGTAATTCAAACGCCAGTTACAGTATGTCAAACGATTTGAAAGGCGGCATGACCAATCTATCGGGGGTTTATGGCACTCTGCTGCCGGATAATAACCTGAATTATAGCGTTCAGGTCGGTAACACCCACGGAGGTAATACATCGTCTGGCACCAGTGGTTACAGTTCTCTTAATTATCGTGGAGCTTATGGTAATACTAATGTCGGTTACAGTCGGAGTGGTGACAGCAGCCAGATTTATTACGGAATGAGTGGTGGGATTATTGCTCATGCTGATGGCATCACCTTTGGACAGCCGCTGGGCGACACAATGGTTCTGGTTAAGGCTCCTGGTGCTGATAATGTCAAAATAGAGAACCAGACCGGAATTCATACCGACTGGCGTGGCTATGCCATATTACCATTTGCGACAGAATATAGAGAAAACCGTGTTGCTCTTAACGCGAATTCCCTTGCAGATAATGTTGAACTGGATGAAACCGTGGTCACTGTCATCCCAACTCACGGTGCTATTGCCAGAGCAACATTTAATGCACAAATCGGCGGGAAAGTATTAATGACGTTGAAGTACGGTAATAAGAGCGTTCCATTCGGTGCAATTGTCACACACGGAGAGAATAAAAATGGCAGCATTGTCGCGGAAAATGGTCAGGTTTATCTGACTGGACTTCCACAGTCAGGGCAATTACAGGTTTCATGGGGCAAAGATAAAAACTCAAACTGTATTGTCGAGTACAAGCTTCCTGAAGTTTCTCCTGGTACCTTACTGAACCAGCAGACAGCAATCTGTCGCTAA", - "dna_sequence_length": 1227, - "id": "CDS_1492", - "location": [ - [ - "NC_000913", - 1590079, - "-", - 1227 - ] - ], - "md5": "f85004971aa534f8830c472c39c185fa", - "parent_gene": "", - "protein_md5": "efd6b91016eacbcd73432d35bb54de45", - "protein_translation": "GTNIQVAGYRYSTQGFYNLSDSAYSRMSGYTVKPPTGDTNEQTQFIDYFNLFYSKRGQEQISISQQLGNYGTTFFSASRQSYWNTSRSDQQISFGLNVPFGDITTSLNYSYSNNIWQNDRDHLLAFTLNVPFSHWMRTDSQSAFRNSNASYSMSNDLKGGMTNLSGVYGTLLPDNNLNYSVQVGNTHGGNTSSGTSGYSSLNYRGAYGNTNVGYSRSGDSSQIYYGMSGGIIAHADGITFGQPLGDTMVLVKAPGADNVKIENQTGIHTDWRGYAILPFATEYRENRVALNANSLADNVELDETVVTVIPTHGAIARATFNAQIGGKVLMTLKYGNKSVPFGAIVTHGENKNGSIVAENGQVYLTGLPQSGQLQVSWGKDKNSNCIVEYKLPEVSPGTLLNQQTAICR", - "protein_translation_length": 408, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5244" - ], - [ - "gene_synonym", - "ASAP:ABE-0005019" - ], - [ - "gene_synonym", - "EcoGene:EG14360" - ], - [ - "gene_synonym", - "b1506" - ], - [ - "gene_synonym", - "ECK1499" - ], - [ - "gene_synonym", - "yneL" - ], - [ - "gene_synonym", - "GeneID:946063" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76138" - ] - ], - "dna_sequence": "ATGAGTCCACTCCGGTATCAGAAATGGCTACGTCTCAATGAAGTCAGGCGACAGATGCTGAATGAACATTACGATGTCACCACAGCAGCCTATGCTGTCGGTTACGAAAGCCTATCCCATTTCAGTCGGGAATATTCGCGGATGTTTGGAGAGTCACCCAAGAGAGATATTACCAGGTTAAGAAAGTCTGTCGGACAGCTTTAA", - "dna_sequence_length": 204, - "id": "CDS_1493", - "location": [ - [ - "NC_000913", - 1590536, - "-", - 111 - ], - [ - "NC_000913", - 1590426, - "-", - 93 - ] - ], - "md5": "17d6e816700918ad5d00d3bb8b9f8fc9", - "parent_gene": "", - "protein_md5": "88bd3a1da904cd367bc632b237be08dd", - "protein_translation": "MSPLRYQKWLRLNEVRRQMLNEHYDVTTAAYAVGYESLSHFSREYSRMFGESPKRDITRLRKSVGQL", - "protein_translation_length": 67, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416024.1" - ], - [ - "gene_synonym", - "JW1500" - ], - [ - "gene_synonym", - "ASAP:ABE-0005022" - ], - [ - "gene_synonym", - "hipA" - ], - [ - "gene_synonym", - "ECK1500" - ], - [ - "gene_synonym", - "GeneID:946064" - ], - [ - "gene_synonym", - "b1507" - ], - [ - "gene_synonym", - "EcoGene:EG10443" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23874" - ], - [ - "gene_synonym", - "GI:16129466" - ] - ], - "dna_sequence": "ATGCCTAAACTTGTCACTTGGATGAACAACCAGCGGGTAGGCGAGTTAACGAAGTTAGCCAACGGCGCGCACACCTTTAAGTATGCACCGGAGTGGTTAGCAAGCCGTTATGCCAGACCGTTGTCACTTTCGCTGCCATTGCAGAGGGGGAATATCACCTCTGATGCCGTATTTAACTTCTTCGATAACCTGTTACCCGATAGCCCGATTGTACGTGACCGGATCGTTAAACGTTATCATGCCAAATCCAGACAACCGTTTGATTTATTGTCAGAAATAGGGCGAGACAGCGTTGGTGCCGTGACGTTAATACCCGAAGACGAAACCGTAACGCATCCGATAATGGCATGGGAAAAGCTTACTGAAGCCAGACTTGAAGAAGTATTAACGGCTTATAAAGCAGATATCCCGCTAGGCATGATTAGAGAAGAAAATGACTTTCGCATCTCGGTTGCTGGCGCACAGGAGAAGACAGCACTGCTCAGAATAGGCAATGACTGGTGCATTCCGAAAGGAATAACGCCGACGACGCACATCATTAAATTACCGATTGGCGAAATCAGGCAGCCCAATGCGACGCTCGATCTCAGCCAAAGCGTTGATAATGAGTATTACTGTCTGCTGCTGGCGAAAGAACTTGGGTTGAATGTTCCGGACGCAGAAATCATTAAAGCGGGAAATGTGCGCGCGTTAGCGGTCGAACGTTTTGACAGGCGTTGGAATGCTGAGCGAACGGTTTTACTTCGCTTGCCACAGGAGGATATGTGTCAGACATTCGGTTTACCTTCATCGGTGAAATATGAATCAGATGGAGGCCCAGGCATCGCGCGGATCATGGCTTTTTTGATGGGGTCCAGCGAGGCGCTGAAAGATCGCTATGATTTTATGAAATTCCAGGTCTTCCAGTGGTTGATTGGCGCAACGGACGGTCATGCAAAAAACTTCTCCGTATTTATTCAGGCTGGCGGCAGTTATCGACTCACGCCATTTTACGACATCATTTCAGCATTTCCGGTCCTTGGCGGTACGGGAATACACATCAGCGATCTCAAACTGGCAATGGGGCTTAACGCATCCAAAGGCAAAAAAACGGCAATCGATAAAATTTATCCGCGACATTTTTTGGCGACAGCAAAGGTGCTGAGATTCCCGGAAGTGCAGATGCATGAAATCCTGAGTGACTTTGCCAGAATGATTCCAGCAGCACTGGATAACGTGAAGACTTCATTACCGACAGATTTTCCGGAGAACGTGGTGACGGCAGTTGAAAGCAATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGA", 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"gene_synonym", - "ASAP:ABE-0005024" - ], - [ - "gene_synonym", - "ECK1501" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23873" - ], - [ - "gene_synonym", - "GeneID:946065" - ], - [ - "gene_synonym", - "EcoGene:EG10442" - ], - [ - "gene_synonym", - "hipB" - ], - [ - "gene_synonym", - "b1508" - ], - [ - "gene_synonym", - "GI:16129467" - ] - ], - "dna_sequence": "ATGATGAGCTTTCAGAAGATCTATAGCCCAACGCAATTGGCGAATGCAATGAAACTGGTTCGCCAGCAAAATGGCTGGACGCAGAGCGAGCTGGCGAAAAAAATTGGTATTAAGCAGGCGACGATTTCCAATTTCGAAAACAACCCTGACAATACCACGCTCACGACATTTTTTAAGATTTTACAGTCGCTTGAACTCTCAATGACGCTATGCGACGCGAAAAATGCCTCGCCAGAATCAACAGAACAGCAAAATCTGGAGTGGTAA", - "dna_sequence_length": 267, - "functions": [ - "antitoxin of HipAB toxin-antitoxin system" - ], - "id": "CDS_1495", - "location": [ - [ - "NC_000913", - 1592442, - "-", - 267 - ] - ], - "md5": "930f0e4da8173919161322ef9f55844a", - "parent_gene": "", - "protein_md5": "18d1c634bc57f7386f29c1a0c602bee7", - "protein_translation": "MMSFQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPDNTTLTTFFKILQSLELSMTLCDAKNASPESTEQQNLEW", - "protein_translation_length": 88, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "orfT" - ], - [ - "gene_synonym", - "GeneID:7751623" - ], - [ - "gene_synonym", - "EcoGene:EG11780" - ], - [ - "gene_synonym", - "JW1503" - ], - [ - "gene_synonym", - "ASAP:ABE-0005037" - ], - [ - "gene_synonym", - "ydeU" - ], - [ - "gene_synonym", - "ECK1503" - ], - [ - "gene_synonym", - "yneO" - ], - [ - "gene_synonym", - "ydeK" - ], - [ - "gene_synonym", - "b4696" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32051" - ] - ], - "dna_sequence": "TTGCGTAAATCCTCTGGACTGACAACGAAATTCAGTAGATTGACGCTGGGTGTTTTGCTGGCACTAAGCGGTTCAGCGTCTGGTGCAAGTCTGGAAGTTGATAATGATCAGATTACCAATATTGATACTGATGTTGCTTATGATGCCTACCTGGTTGGCTGGTATGGCACTGGAGTGCTTAATATTTTGGCTGGCGGTAATGCCTCCTTAACCACTATTACTACCAGCGTCATTGGCGCTAATGAGGACTCAGAGGGCACCGTTAATGTTTTGGGTGGCACCTGGCGATTGTATGATAGCGGAAATAATGCAAGGCCTTTAAATGTGGGTCAATCCGGAACGGGGACGCTGAATATTAAACAGAAGGGTCACGTCGATGGAGGCTATTTAAGATTAGGTTCTTCGACAGGAGGCGTCGGGACGGTCAATGTTGAGGGAGAGGACTCTGTTCTGACGACCGAATTATTCGAAATAGGTAGCTATGGCACAGGTTCATTAAATATTACGGATAAGGGTTACGTCACGAGTTCAATCGTCGCCATTTTAGGCTATCAGGCGGGCAGTAATGGCCAGGTTGTCGTTGAAAAGGGTGGCGAGTGGCTAATAAAAAATAATGATTCCTCAATTGAATTTCAAATTGGTAATCAAGGAACTGGGGAGGCGACTATTCGCGAGGGGGGGTTGGTTACGGCTGAAAATACGATTATCGGTGGCAATGCCACCGGTATCGGAACCCTGAATGTGCAGGATCAAGACTCTGTCATCACGGTACGCAGACTCTATAATGGATATTTCGGTAATGGCACAGTCAATATTTCCAATAATGGACTGATTAATAACAAAGAATATTCATTGGTGGGCGTTCAGGACGGTTCCCACGGTGTCGTCAACGTGACCGATAAAGGGCATTGGAATTTCCTCGGAACGGGCGAAGCTTTCCGCTATATCTATATCGGTGATGCTGGCGACGGTGAACTTAATGTCTCGAGTGAAGGCAAAGTAGATTCGGGAATTATCACTGCGGGGATGAAAGAAACAGGCACAGGCAACATTACTGTTAAGGATAAGAACTCCGTTATCACTAATCTCGGAACTAATCTTGGTTATGACGGCCACGGCGAAATGAATATCAGTAATCAGGGGCTTGTTGTCAGCAACGGAGGAAGTTCACTCGGTTATGGAGAAACCGGCGTCGGGAATGTCAGCATCACCACGGGGGGAATGTGGGAGGTCAATAAGAATGTCTATACCACCATTGGTGTTGCGGGCGTCGGAAACCTCAATATTAGCGATGGCGGTAAGTTCGTATCGCAAAATATTACTTTTTTGGGCGATAAAGCAAGCGGTATCGGCACACTGAACCTGATGGATGCGACATCATCGTTCGATACTGTGGGTATCAATGTCGGTAATTTTGGTAGCGGTATCGTAAATGTCAGTAATGGTGCCACCCTTAATTCAACGGGCTATGGATTTATCGGAGGAAATGCCTCCGGTAAGGGGATAGTTAATATTTCAACGGACAGTCTCTGGAATTTAAAGACATCATCTACTAACGCACAATTGCTACAGGTCGGTGTATTAGGCACGGGTGAACTGAATATTACCACCGGAGGTATAGTTAAAGCGCGTGATACACAGATAGCTCTCAATGACAAAAGTAAGGGCGACGTGAGGGTGGATGGGCAGAACTCTCTTCTTGAAACATTCAATATGTACGTAGGGACATCTGGTACGGGTACGTTAACCCTGACGAATAACGGTACGCTGAATGTCGAAGGTGGAGAAGTTTACTTAGGTGTTTTTGAGCCTGCTGTAGGAACGCTAAACATTGGTGCTGCTCACGGTGAGGCGGCGGCAGATGCCGGATTTATCACCAATGCGACGAAAGTGGAGTTTGGTCTTGGCGAAGGCGTTTTTGTCTTTAATCATACCAATAACAGTGATGCCGGCTACCAGGTCGATATGCTGATTACAGGTGACGATAAAGACGGAAAAGTGATCCATGATGCAGGCCATACGGTGTTCAATGCAGGGAATACTTATAGCGGTAAAACGCTGGTCAATGACGGCCTCCTGACCATTGCGTCTCATACGGCAGATGGGGTAACGGGCATGGGGTCGAGTGAAGTAACCATTGCAAACCCCGGTACGCTCGACATTCTCGCATCAACGAACAGTGCAGGAGATTACACGCTGACCAATGCGCTCAAAGGCGATGGCTTGATGCGAGTGCAGCTGTCATCCTCCGACAAGATGTTTGGCTTTACCCATGCAACAGGGACTGAATTCGCCGGTGTTGCCCAACTGAAAGACAGTACCTTCACTCTGGAACGCGACAACACCGCTGCGCTTACTCACGCGATGTTGCAGTCTGACAGTGAAAATACCACATCGGTAAAAGTTGGAGAGCAATCCATTGGTGGACTGGCCATGAATGGAGGTACCATCATTTTCGATACGGATATTCCTGCTGCGACGCTCGCGGAGGGATATATCAGCGTCGATACGCTGGTTGTCGGCGCGGGTGACTACACCTGGAAAGGCCGTAACTATCAGGTAAACGGGACGGGCGACGTGCTTATCGACGTGCCTAAACCGTGGAATGATCCCATGGCGAATAACCCTCTGACGACGCTCAATTTGCTGGAACACGACGATAGCCATGTCGGCGTTCAACTGGTGAAGGCGCAAACGGTTATTGGGTCGGGTGGCTCATTAACGTTACGTGATTTACAGGGCGACGAGGTGGAAGCGGACAAAACGTTACACATTGCGCAAAACGGAACGGTGGTCGCCGAGGGTGATTATGGATTCCGCCTCACGACCGCACCAGGTAATGGTTTGTACGTTAACTATGGGCTGAAAGCGCTGAACATCCATGGTGGGCAAAAGCTGACGTTAGCCGAACATGGCGGAGCCTATGGCGCAACGGCCGATATGTCGGCAAAAATCGGTGGTGAAGGGGATCTGGCAATCAATACGGTGCGACAGGTTTCGCTTTCCAACGGTCAGAACGACTATCAGGGGGCAACCTACGTTCAGATGGGGACATTACGTACCGATGCGGATGGTGCACTTGGCAACACCCGGGAACTGAACATCAGCAACGCGGCCATCGTCGATCTTAATGGATCGACGCAGACGGTAGAGACATTCACCGGGCAGATGGGTTCGACTGTTTTGTTCAAAGAGGGGGCGCTGACGGTAAATAAAGGTGGGATCAGTCAGGGTGAACTGACAGGTGGCGGAAACCTGAATGTTACAGGGGGAACGCTGGCTATCGAGGGGCTTAATGCACGCTACAATGCGTTAACCAGCATTAGCCCAAATGCGGAAGTCAGCCTCGATAATACTCAGGGGTTAGGCAGAGGAAATATTGCCAATGACGGTCTGTTAACGCTAAAAAACGTGACTGGCGAACTGCGTAATAGCATAAGCGGGAAGGGTATCGTGAGCGCAACCGCCAGGACAGATGTAGAGTTGGATGGCGATAATAGCCGCTTTGTGGGGCAATTCAACATTGATACAGGCAGCGCGCTCAGCGTCAACGAGCAGAAAAACCTGGGTGATGCTTCCGTTATCAATAATGGCCTGCTCACCATCTCCACTGAGCGTAGCTGGGCGATGACGCACAGTATCAGCGGTAGCGGTGATGTGACAAAACTGGGTACCGGGATCCTGACTCTTAACAACGATTCCGCGGCGTATCAGGGTACGACGGATATCGTGGGGGGGGAAATTGCTTTCGGTTCCGACTCTGCCATTAATATGGCAAGTCAACACATTAATATCCATAACAGCGGTGTGATGTCGGGAAATGTCACCACTGCAGGTGATATGAACGTTATGCCTGGGGGGGCACTGCGTGTCGCTAAAACCACTATCGGCGGCAACCTGGAGAATGGCGGCACGGTTCAAATGAATAGCGAAGGGGGGAAACCGGGGAATGTACTGACCGTTAACGGCAACTATACCGGAAACAATGGCCTGATGACGTTCAACGCGACGCTGGGCGGCGATAATTCGCCCACCGATAAGATGAACGTGAAAGGCGATACCCAAGGGAACACTCGCGTTCGGGTTGATAACATTGGCGGCGTCGGTGCACAAACGGTCAACGGTATTGAACTCATTGAGGTTGGCGGTAATTCTGCAGGTAACTTCGCGCTGACCACCGGAACTGTCGAAGCTGGGGCTTACGTCTACACGCTGGCTAAAGGGAAGGGGAATGACGAGAAAAACTGGTATCTGACCAGTAAATGGGACGGCGTAACGCCAGCGGATACACCCGATCCCATCAATAATCCCCCTGTTGTGGATCCGGAAGGCCCATCAGTTTATCGCCCGGAGGCCGGAAGCTATATCAGCAACATTGCCGCAGCCAACTCGCTGTTTAGCCATCGTTTACACGACCGTCTGGGTGAGCCGCAGTATACAGATTCACTGCATTCTCAGGGGTCGGCAAGCAGTATGTGGATGCGTCATGTCGGAGGGCACGAACGTTCAAGGGCCGGTGACGGTCAGCTAAATACTCAGGCTAACCGCTATGTATTGCAGCTAGGCGGCGATTTGGCGCAGTGGAGTAGCAACGCGCAGGATCGCTGGCATCTTGGCGTGATGGCAGGCTACGCCAATCAGCACAGTAATACTCAGAGTAATCGTGTGGGTTATAAATCGGATGGGCGCATCAGCGGTTACAGCGCTGGGCTGTACGCGACCTGGTATCAGAACGATGCGAATAAGACCGGCGCTTATGTTGACAGCTGGGCGCTGTATAACTGGTTTGATAACAGCGTCAGTTCCGATAACCGTTCTGCTGACGACTATGATTCTCGCGGTGTGACGGCCTCTGTTGAGGGTGGGTATACCTTTGAAGCGGGAACATTTAGCGGCAGCGAAGGGACGCTGAATACCTGGTACGTCCAGCCACAGGCGCAAATCACCTGGATGGGTGTGAAAGATTCCGACCATACCCGGAAAGACGGAACGCGCATTGAAACGGAAGGCGACGGAAATGTGCAAACGCGACTTGGGGTGAAAACCTACCTGAACAGCCATCACCAGCGTGACGATGGTAAACAGCGTGAGTTCCAGCCTTACATTGAAGCGAACTGGATCAACAATAGCAAAGTCTACGCCGTGAAGATGAATGGTCAAACCGTAGGCCGTGAAGGTGCGCGTAATCTCGGTGAAGTACGTACCGGGGTTGAGGCGAAAGTAAATAACAACCTTAGCCTGTGGGGGAATGTCGGTGTGCAACTAGGTGATAAAGGCTATAGCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAA", - "dna_sequence_length": 5322, - "id": "CDS_1496", - "location": [ - [ - "NC_000913", - 1597987, - "-", - 3861 - ], - [ - "NC_000913", - 1594125, - "-", - 1461 - ] - ], - "md5": "092c8089a862973109031f798df53d44", - "parent_gene": "", - "protein_md5": "e89795a02bd127f9e690064aff4a456c", - "protein_translation": "LRKSSGLTTKFSRLTLGVLLALSGSASGASLEVDNDQITNIDTDVAYDAYLVGWYGTGVLNILAGGNASLTTITTSVIGANEDSEGTVNVLGGTWRLYDSGNNARPLNVGQSGTGTLNIKQKGHVDGGYLRLGSSTGGVGTVNVEGEDSVLTTELFEIGSYGTGSLNITDKGYVTSSIVAILGYQAGSNGQVVVEKGGEWLIKNNDSSIEFQIGNQGTGEATIREGGLVTAENTIIGGNATGIGTLNVQDQDSVITVRRLYNGYFGNGTVNISNNGLINNKEYSLVGVQDGSHGVVNVTDKGHWNFLGTGEAFRYIYIGDAGDGELNVSSEGKVDSGIITAGMKETGTGNITVKDKNSVITNLGTNLGYDGHGEMNISNQGLVVSNGGSSLGYGETGVGNVSITTGGMWEVNKNVYTTIGVAGVGNLNISDGGKFVSQNITFLGDKASGIGTLNLMDATSSFDTVGINVGNFGSGIVNVSNGATLNSTGYGFIGGNASGKGIVNISTDSLWNLKTSSTNAQLLQVGVLGTGELNITTGGIVKARDTQIALNDKSKGDVRVDGQNSLLETFNMYVGTSGTGTLTLTNNGTLNVEGGEVYLGVFEPAVGTLNIGAAHGEAAADAGFITNATKVEFGLGEGVFVFNHTNNSDAGYQVDMLITGDDKDGKVIHDAGHTVFNAGNTYSGKTLVNDGLLTIASHTADGVTGMGSSEVTIANPGTLDILASTNSAGDYTLTNALKGDGLMRVQLSSSDKMFGFTHATGTEFAGVAQLKDSTFTLERDNTAALTHAMLQSDSENTTSVKVGEQSIGGLAMNGGTIIFDTDIPAATLAEGYISVDTLVVGAGDYTWKGRNYQVNGTGDVLIDVPKPWNDPMANNPLTTLNLLEHDDSHVGVQLVKAQTVIGSGGSLTLRDLQGDEVEADKTLHIAQNGTVVAEGDYGFRLTTAPGNGLYVNYGLKALNIHGGQKLTLAEHGGAYGATADMSAKIGGEGDLAINTVRQVSLSNGQNDYQGATYVQMGTLRTDADGALGNTRELNISNAAIVDLNGSTQTVETFTGQMGSTVLFKEGALTVNKGGISQGELTGGGNLNVTGGTLAIEGLNARYNALTSISPNAEVSLDNTQGLGRGNIANDGLLTLKNVTGELRNSISGKGIVSATARTDVELDGDNSRFVGQFNIDTGSALSVNEQKNLGDASVINNGLLTISTERSWAMTHSISGSGDVTKLGTGILTLNNDSAAYQGTTDIVGGEIAFGSDSAINMASQHINIHNSGVMSGNVTTAGDMNVMPGGALRVAKTTIGGNLENGGTVQMNSEGGKPGNVLTVNGNYTGNNGLMTFNATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFALTTGTVEAGAYVYTLAKGKGNDEKNWYLTSKWDGVTPADTPDPINNPPVVDPEGPSVYRPEAGSYISNIAAANSLFSHRLHDRLGEPQYTDSLHSQGSASSMWMRHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWSSNAQDRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYATWYQNDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVKDSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVRTGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGMLGVKYSW", - "protein_translation_length": 1773, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1504" - ], - [ - "gene_synonym", - "lsrK" - ], - [ - "gene_synonym", - "ECK1504" - ], - [ - "gene_synonym", - "ASAP:ABE-0005041" - ], - [ - "gene_synonym", - "GeneID:946069" - ], - [ - "gene_synonym", - "GI:49176118" - ], - [ - "gene_synonym", - "EcoGene:EG13804" - ], - [ - "gene_synonym", - "NP_416028.3" - ], - [ - "gene_synonym", - "b1511" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77432" - ], - [ - "gene_synonym", - "ydeV" - ] - ], - "dna_sequence": "ATGGCTCGACTCTTTACCCTTTCAGAATCAAAGTACTACCTGATGGCGCTGGATGCAGGCACCGGAAGTATTCGGGCTGTGATATTCGACCTGGAAGGCAATCAAATAGCAGTGGGACAGGCGGAGTGGCGGCATCTGGCAGTACCGGACGTTCCTGGTTCTATGGAATTTGATCTCAACAAAAACTGGCAACTGGCGTGTGAGTGTATGCGCCAGGCGCTGCACAACGCCGGCATAGCCCCGGAGTATATCGCTGCCGTTTCGGCATGTTCGATGCGTGAAGGCATTGTTTTATATAATAATGAAGGAGCCCCGATCTGGGCCTGCGCCAATGTGGATGCCAGAGCGGCACGCGAAGTTAGCGAACTTAAAGAACTGCACAACAATACCTTTGAAAACGAAGTTTATCGCGCGACCGGACAAACACTGGCTTTAAGTGCCATCCCCAGATTACTTTGGCTGGCGCACCATCGTTCCGATATTTACCGTCAGGCATCAACCATCACCATGATCAGCGACTGGCTGGCCTATATGCTCAGCGGCGAACTGGCGGTGGATCCCTCTAACGCTGGCACCACGGGACTTCTTGATCTAACCACCCGTGACTGGAAACCTGCATTGCTGGATATGGCTGGCCTACGTGCCGATATTCTTTCTCCTGTCAAAGAAACCGGCACATTGCTGGGCGTGGTAAGTTCACAAGCGGCGGAACTCTGCGGTCTGAAGGCGGGCACTCCGGTGGTCGTTGGAGGAGGCGACGTGCAGCTTGGTTGCCTTGGGTTAGGCGTTGTGCGTCCGGCACAAACCGCGGTTCTTGGCGGCACATTCTGGCAGCAAGTTGTAAATTTAGCCGCGCCGGTGACAGACCCAGAAATGAACGTGCGCGTTAATCCTCATGTTATTCCTGGCATGGTACAAGCTGAATCTATAAGCTTTTTTACCGGACTCACCATGCGCTGGTTCCGCGATGCTTTCTGTGCCGAAGAAAAACTGATTGCCGAACGTTTAGGCATCGACACCTATACGCTGCTGGAAGAGATGGCCAGTCGGGTGCCGCCTGGGTCGTGGGGCGTAATGCCGATCTTCTCCGACAGAATGCGCTTTAAAACCTGGTATCACGCTGCGCCTTCCTTTATTAACTTGTCCATTGACCCGGATAAATGTAACAAAGCGACATTGTTCCGTGCGCTGGAAGAAAATGCGGCGATTGTATCAGCGTGTAACTTGCAGCAAATTGCTGATTTCTCGAATATTCATCCTTCATCGTTAGTCTTTGCAGGCGGAGGTTCAAAAGGGAAATTATGGAGTCAAATTCTCGCTGATGTCTCGGGATTACCCGTCAATATTCCGGTGGTCAAAGAAGCCACTGCATTAGGATGTGCCATTGCAGCTGGCGTCGGTGCCGGAATTTTTTCATCAATGGCAGAAACCGGAGAACGCCTGGTTCGCTGGGAACGGACGCACACACCAGACCCGGAAAAGCATGAACTTTATCAGGATTCACGCGATAAGTGGCAGGCAGTTTATCAGGATCAGCTGGGGCTGGTTGATCATGGACTGACGACGTCGTTATGGAAAGCGCCTGGGTTATAG", - "dna_sequence_length": 1593, - "functions": [ - "autoinducer-2 (AI-2) kinase" - ], - "id": "CDS_1497", - "location": [ - [ - "NC_000913", - 1600209, - "-", - 1593 - ] - ], - "md5": "f885072d9a8d0abd28b77811be843ed1", - "parent_gene": "", - "protein_md5": "e2929a88737b103f5e2461f3cb15e79c", - "protein_translation": "MARLFTLSESKYYLMALDAGTGSIRAVIFDLEGNQIAVGQAEWRHLAVPDVPGSMEFDLNKNWQLACECMRQALHNAGIAPEYIAAVSACSMREGIVLYNNEGAPIWACANVDARAAREVSELKELHNNTFENEVYRATGQTLALSAIPRLLWLAHHRSDIYRQASTITMISDWLAYMLSGELAVDPSNAGTTGLLDLTTRDWKPALLDMAGLRADILSPVKETGTLLGVVSSQAAELCGLKAGTPVVVGGGDVQLGCLGLGVVRPAQTAVLGGTFWQQVVNLAAPVTDPEMNVRVNPHVIPGMVQAESISFFTGLTMRWFRDAFCAEEKLIAERLGIDTYTLLEEMASRVPPGSWGVMPIFSDRMRFKTWYHAAPSFINLSIDPDKCNKATLFRALEENAAIVSACNLQQIADFSNIHPSSLVFAGGGSKGKLWSQILADVSGLPVNIPVVKEATALGCAIAAGVGAGIFSSMAETGERLVRWERTHTPDPEKHELYQDSRDKWQAVYQDQLGLVDHGLTTSLWKAPGL", - "protein_translation_length": 530, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1505" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76141" - ], - [ - "gene_synonym", - "ydeW" - ], - [ - "gene_synonym", - "ASAP:ABE-0005045" - ], - [ - "gene_synonym", - "ECK1505" - ], - [ - "gene_synonym", - "EcoGene:EG13805" - ], - [ - "gene_synonym", - "lsrR" - ], - [ - "gene_synonym", - "b1512" - ], - [ - "gene_synonym", - "GI:16129471" - ], - [ - "gene_synonym", - "GeneID:946070" - ], - [ - "gene_synonym", - "NP_416029.1" - ] - ], - "dna_sequence": "ATGACAATCAACGATTCGGCAATTTCAGAACAGGGAATGTGTGAAGAAGAACAGGTCGCGCGGATCGCGTGGTTTTACTATCACGACGGGCTGACCCAGAGCGAGATCAGCGATCGTCTCGGCCTGACACGTTTGAAAGTGTCGCGATTGCTGGAGAAAGGGCATCAGTCCGGCATTATTCGCGTACAGATTAATTCTCGCTTTGAAGGCTGTCTGGAATATGAAACTCAATTACGTCGTCAGTTTTCGCTGCAACATGTCCGGGTGATCCCTGGGCTTGCGGATGCTGATGTCGGTGGGCGACTGGGGATAGGCGCGGCGCATATGTTGATGAGTTTACTTCAACCACAACAGATGCTGGCGATTGGTTTTGGCGAGGCAACCATGAATACGCTGCAACGCTTAAGTGGTTTTATTTCGTCACAGCAAATTCGCCTGGTCACGCTCTCCGGTGGCGTCGGTTCTTATATGACGGGAATCGGGCAGCTTAACGCGGCGTGCAGTGTGAATATTATTCCGGCTCCGTTGCGGGCATCCTCCGCTGACATTGCCCGTACGCTAAAAAATGAAAATTGCGTCAAAGATGTTCTGTTAGCCGCGCAAGCAGCGGATGTGGCGATTGTCGGCATTGGTGCTGTGAGTCAACAGGACGATGCGACAATCATTCGCTCCGGTTATATCAGCCAGGGCGAACAGTTAATGATTGGCCGAAAAGGGGCGGTTGGCGACATTTTAGGCTACTTTTTTGATGCAAAAGGTGACGTTGTCACGAATATCAAAATACATAACGAACTGATTGGCTTACCTTTAAGCGCGCTGAAGACCATACCCGTCCGGGTTGGCGTGGCAGGGGGAGAAAATAAAGCCGAAGCAATTGCCGCTGCAATGAAAGGCGGTTATATCAACGCACTGGTTACCGATCAGGACACAGCAGCGGCGATTTTACGTAGTTAA", - "dna_sequence_length": 954, - "functions": [ - "lsr operon transcriptional repressor" - ], - "id": "CDS_1498", - "location": [ - [ - "NC_000913", - 1601241, - "-", - 954 - ] - ], - "md5": "792d96a4d3fb71f855a24dfbb3130beb", - "parent_gene": "", - "protein_md5": "3c73933c9d6e747ef6c5b84b70ff8e1b", - "protein_translation": "MTINDSAISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGIIRVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRLGIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIGQLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGAVGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAILRS", - "protein_translation_length": 317, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "lsrA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77257" - ], - [ - "gene_synonym", - "JW1506" - ], - [ - "gene_synonym", - "ydeX" - ], - [ - "gene_synonym", - "ECK1506" - ], - [ - "gene_synonym", - "GeneID:945680" - ], - [ - "gene_synonym", - "ASAP:ABE-0005056" - ], - [ - "gene_synonym", - "EcoGene:EG13806" - ], - [ - "gene_synonym", - "ego" - ], - [ - "gene_synonym", - "b1513" - ], - [ - "gene_synonym", - "NP_416030.1" - ], - [ - "gene_synonym", - "GI:16129472" - ] - ], - "dna_sequence": "ATGCAAACGAGTGATACCCGCGCGTTACCGCTACTTTGCGCCCGCTCGGTTTATAAACAGTATTCAGGGGTCAATGTCCTGAAAGGCATCGATTTTACGTTGCATCAGGGGGAGGTCCACGCCCTGCTCGGCGGCAATGGTGCCGGTAAATCGACGTTAATGAAGATTATTGCCGGTATTACCCCTGCTGATAGCGGTACGCTGGAGATTGAGGGCAACAACTACGTCAGATTAACGCCAGTTCATGCTCATCAGCTGGGTATTTATCTCGTTCCCCAGGAACCGCTGCTTTTCCCAAGCCTGTCGATAAAAGAAAACATCCTGTTTGGGCTGGCAAAAAAACAGCTCTCCATGCAGAAAATGAAGAACTTGCTGGCGGCGCTGGGCTGCCAGTTTGATCTGCATAGTCTGGCAGGATCGCTGGATGTCGCCGATCGCCAAATGGTGGAAATCCTCCGCGGGCTGATGCGCGACTCGCGGATTCTGATCCTCGATGAACCTACCGCCTCGCTTACCCCTGCGGAAACCGAACGCTTGTTTAGTCGCTTGCAAGAGCTGCTTGCTACTGGCGTGGGTATTGTTTTTATCTCGCATAAGCTGCCGGAAATTCGCCAGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGCCCACAACATGCCGCCGGAACGCCGGTGCTGACACTGGAAAATCTGACCGGCGAAGGTTTCAGGAATGTCAGCCTGACGCTCAATGCCGGAGAAATTCTGGGCCTGGCTGGGCTGGTGGGGGCCGGACGCACAGAACTGGCCGAGACGCTCTATGGTCTGCGTACTTTGCGTGGCGGACGCATTATGCTGAATGGTAAAGAGATCAATAAATTATCCACTGGAGAACGTTTACTGCGCGGTCTGGTTTATCTGCCGGAAGATCGCCAGTCATCCGGACTGAATCTCGATGCTTCGCTGGCCTGGAACGTCTGCGCCCTTACTCATAACCTTCGTGGATTCTGGGCGAAAACCGCGAAAGATAATGCCACCCTGGAACGTTATCGTCGGGCGCTGAATATTAAATTCAACCAACCGGAACAAGCTGCACGGACATTATCCGGTGGCAACCAGCAAAAAATCCTCATTGCCAAATGCTTGGAAGCTTCGCCGCAAGTATTGATTGTCGATGAGCCGACGCGCGGCGTGGATGTCTCGGCCCGTAATGATATCTACCAGCTGTTGCGCAGCATCGCCGCACAAAATGTGGCTGTGCTGCTTATCTCCTCCGACCTGGAAGAGATCGAACTGATGGCAGATCGTGTGTATGTGATGCATCAGGGCGAAATTACCCACTCTGCACTGACCGAGCGCGATATTAATGTCGAGACTATTATGCGCGTTGCCTTCGGCGATAGTCAGCGTCAGGAGGCGTCATGCTGA", 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"UniProtKB/Swiss-Prot:P77672" - ], - [ - "gene_synonym", - "ydeY" - ], - [ - "gene_synonym", - "ECK1507" - ], - [ - "gene_synonym", - "NP_416031.1" - ], - [ - "gene_synonym", - "JW1507" - ], - [ - "gene_synonym", - "b1514" - ], - [ - "gene_synonym", - "EcoGene:EG13807" - ], - [ - "gene_synonym", - "GI:16129473" - ], - [ - "gene_synonym", - "GeneID:946105" - ], - [ - "gene_synonym", - "ASAP:ABE-0005059" - ] - ], - "dna_sequence": "ATGCTGAAGTTTATTCAGAACAACCGTGAAATCACGGCACTGCTGGCGGTGGTGCTGCTGTTTGTATTACCCGGTTTTCTCGACCGCCAGTATTTAAGTGTGCAAACGCTGACCATGGTTTATAGCAGCGCGCAAATCCTGATCCTGCTGGCAATGGGCGCGACGCTGGTAATGCTTACGCGCAATATTGATGTTTCAGTGGGTTCGATTACCGGAATGTGCGCGGTGCTGTTGGGGATGTTACTGAACGCAGGATATTCACTACCTGTTGCTTGTGTCGCGACTTTACTGCTTGGTTTGCTCGCGGGATTTTTCAACGGTGTCCTGGTCGCGTGGCTAAAGATCCCTGCCATTGTTGCCACCCTTGGCACGTTAGGGTTGTACAGAGGCATCATGTTGCTGTGGACTGGCGGCAAATGGATTGAAGGGTTACCCGCCGAACTGAAACAGCTCTCCGCCCCGCTGCTGCTTGGCGTTTCAGCAATTGGTTGGTTGACGATAATTCTGGTGGCATTTATGGCCTGGCTGCTGGCAAAGACGGCGTTTGGACGCAGTTTTTATGCCACGGGCGATAATTTACAGGGCGCTCGTCAACTGGGCGTTCGTACTGAAGCCATTCGCATTGTGGCATTTTCGTTGAACGGCTGCATGGCGGCACTGGCGGGAATTGTGTTTGCTTCGCAGATTGGTTTTATCCCCAACCAGACCGGTACCGGGCTGGAGATGAAAGCAATTGCAGCCTGCGTGCTGGGCGGCATTAGTTTGCTCGGTGGTTCCGGTGCGATCATTGGTGCGGTACTCGGCGCATGGTTCCTGACGCAGATCGATAGCGTACTGGTGCTGTTGCGCATTCCGGCATGGTGGAATGATTTTATCGCGGGTCTGGTTCTGCTGGCGGTGCTGGTGTTTGATGGACGCCTGCGTTGTGCGCTGGAACGTAATCTACGGCGGCAAAAATATGCCCGCTTTATGACGCCACCGCCATCCGTTAAACCCGCTTCGTCAGGTAAAAAACGGGAGGCCGCATAA", - "dna_sequence_length": 1029, - "functions": [ - "autoinducer 2 import system permease protein" - ], - "id": "CDS_1500", - "location": [ - [ - "NC_000913", - 1603019, - "+", - 1029 - ] - ], - "md5": "c71de73e26ba880b797e02ea50e5378f", - "parent_gene": "", - "protein_md5": "d227b7a05efcca392027e22ffb10c296", - "protein_translation": "MLKFIQNNREITALLAVVLLFVLPGFLDRQYLSVQTLTMVYSSAQILILLAMGATLVMLTRNIDVSVGSITGMCAVLLGMLLNAGYSLPVACVATLLLGLLAGFFNGVLVAWLKIPAIVATLGTLGLYRGIMLLWTGGKWIEGLPAELKQLSAPLLLGVSAIGWLTIILVAFMAWLLAKTAFGRSFYATGDNLQGARQLGVRTEAIRIVAFSLNGCMAALAGIVFASQIGFIPNQTGTGLEMKAIAACVLGGISLLGGSGAIIGAVLGAWFLTQIDSVLVLLRIPAWWNDFIAGLVLLAVLVFDGRLRCALERNLRRQKYARFMTPPPSVKPASSGKKREAA", - "protein_translation_length": 342, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416032.1" - ], - [ - "gene_synonym", - "ydeZ" - ], - [ - "gene_synonym", - "ECK1508" - ], - [ - "gene_synonym", - "JW1508" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFS1" - ], - [ - "gene_synonym", - "GeneID:946264" - ], - [ - "gene_synonym", - "b1515" - ], - [ - "gene_synonym", - "ASAP:ABE-0005061" - ], - [ - "gene_synonym", - "GI:16129474" - ], - [ - "gene_synonym", - "EcoGene:EG13808" - ], - [ - "gene_synonym", - "lsrD" - ] - ], - "dna_sequence": "ATGCGTATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTGATCAACGCCGGATTAATTATCTATACCAAAGTTAACCCGCTGGTGATTACGCTTGGCACGCTGTATCTGTTTGCCGGAAGCGCTCTGCTGCTTTCCGGTATGGCCGGAGCGACGGGGTACGAAGGTATTGGTGGATTCCCGATGGCGTTTACAGATTTCGCTAACCTGGATGTGCTGGGACTCCCCGTTCCGCTGATTATCTTCCTGATATGTCTCCTCGTTTTCTGGCTCTGGCTGCATAAAACCCATGCCGGACGTAATGTGTTTTTGATTGGGCAAAGCCCGCGCGTGGCGCTTTATAGCGCGATTCCAGTTAACCGTACCTTATGTGCGCTCTATGCCATGACGGGGCTGGCGTCTGCGGTCGCCGCTGTGCTGCTGGTATCGTATTTTGGTTCAGCACGTTCCGATCTCGGTGCGTCGTTTCTGATGCCCGCCATCACCGCCGTGGTGCTTGGCGGGGCCAATATTTATGGTGGTTCCGGTTCCATTATCGGCACCGCCATTGCGGTTTTATTAGTGGGATATTTGCAACAAGGTTTGCAAATGGCAGGAGTGCCAAATCAGGTGTCCAGCGCCCTTTCCGGTGCGCTACTTATCGTCGTTGTCGTAGGTCGTTCCGTTAGCCTGCATCGCCAGCAAATTAAAGAGTGGCTGGCGCGTCGGGCCAATAACCCATTGCCATAA", - "dna_sequence_length": 993, - "functions": [ - "autoinducer 2 import system permease protein" - ], - "id": "CDS_1501", - "location": [ - [ - "NC_000913", - 1604047, - "+", - 993 - ] - ], - "md5": "4fea17ae40bcac0e5f317c197ee2e41c", - "parent_gene": "", - "protein_md5": "2e7749717efd45fefa0c2935015c7f5f", - "protein_translation": "MRIRYGWELALAALLVIEIVAFGAINPRMLDLNMLLFSTSDFICIGIVALPLTMVIVSGGIDISFGSTIGLCAIALGVLFQSGVPMPLAILLTLLLGALCGLINAGLIIYTKVNPLVITLGTLYLFAGSALLLSGMAGATGYEGIGGFPMAFTDFANLDVLGLPVPLIIFLICLLVFWLWLHKTHAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMTGLASAVAAVLLVSYFGSARSDLGASFLMPAITAVVLGGANIYGGSGSIIGTAIAVLLVGYLQQGLQMAGVPNQVSSALSGALLIVVVVGRSVSLHRQQIKEWLARRANNPLP", - "protein_translation_length": 330, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "lsrB" - ], - [ - "gene_synonym", - "GeneID:945418" - ], - [ - "gene_synonym", - "ECK1509" - ], - [ - "gene_synonym", - "JW1509" - ], - [ - "gene_synonym", - "b1516" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76142" - ], - [ - "gene_synonym", - "ASAP:ABE-0005063" - ], - [ - "gene_synonym", - "NP_416033.1" - ], - [ - "gene_synonym", - "yneA" - ], - [ - "gene_synonym", - "EcoGene:EG13809" - ], - [ - "gene_synonym", - "GI:16129475" - ] - ], - "dna_sequence": "ATGACACTTCATCGCTTTAAGAAAATCGCCTTACTTAGCGCTCTTGGCATTGCCGCAATCTCTATGAATGTGCAGGCCGCAGAGCGTATTGCATTTATTCCCAAACTGGTTGGCGTGGGATTTTTTACCAGCGGTGGCAACGGCGCACAACAAGCGGGTAAAGAGCTGGGCGTTGATGTGACCTACGACGGGCCGACAGAACCCAGTGTTTCTGGTCAGGTACAGTTGATTAATAACTTCGTCAATCAAGGTTATAACGCCATTATCGTTTCTGCGGTTTCGCCTGATGGCTTGTGTCCGGCACTGAAACGCGCCATGCAACGTGGTGTGAGAGTGCTGACCTGGGACTCTGATACTAAACCGGAGTGCCGCTCTTACTACATTAATCAGGGAACGCCCGCCCAGTTAGGAGGTATGTTGGTGGATATGGCGGCGCGTCAGGTGAATAAAGACAAAGCCAAAGTCGCGTTTTTCTACTCAAGCCCCACCGTTACGGACCAAAACCAGTGGGTGAAAGAAGCGAAAGCGAAAATCGCCAAAGAGCATCCAGGCTGGGAAATTGTCACTACGCAGTTTGGCTATAACGATGCCACTAAATCGTTACAAACCGCAGAAGGAATATTAAAAGCGTATAGCGATCTCGACGCCATTATCGCCCCCGATGCCAACGCCCTGCCCGCTGCCGCACAAGCCGCAGAAAACTTGAAAAATGACAAAGTAGCGATTGTCGGATTCAGTACGCCAAATGTGATGCGCCCGTATGTAGAGCGCGGCACGGTGAAAGAATTTGGCCTGTGGGATGTGGTTCAGCAAGGCAAAATTTCAGTGTATGTCGCGGATGCATTATTGAAAAAAGGATCAATGAAAACGGGCGACAAGCTGGATATCAAGGGCGTAGGTCAGGTTGAAGTCTCGCCAAACAGCGTTCAGGGCTATGACTACGAAGCGGATGGTAATGGCATCGTACTGTTACCGGAGCGCGTGATATTCAACAAAGAGAATATCGGCAAATACGATTTCTGA", - "dna_sequence_length": 1023, - "functions": [ - "autoinducer 2-binding protein" - ], - "id": "CDS_1502", - "location": [ - [ - "NC_000913", - 1605051, - "+", - 1023 - ] - ], - "md5": "cb2f6993225173d7cd129781e3260b2a", - "parent_gene": "", - "protein_md5": "8d3124034af62fe96c937d07034f0424", - "protein_translation": "MTLHRFKKIALLSALGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTKPECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTDQNQWVKEAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKVAIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIKGVGQVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF", - "protein_translation_length": 340, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1510" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76143" - ], - [ - "gene_synonym", - "JW1510" - ], - [ - "gene_synonym", - "lsrF" - ], - [ - "gene_synonym", - "ASAP:ABE-0005065" - ], - [ - "gene_synonym", - "b1517" - ], - [ - "gene_synonym", - "EcoGene:EG13810" - ], - [ - "gene_synonym", - "NP_416034.1" - ], - [ - "gene_synonym", - "yneB" - ], - [ - "gene_synonym", - "GeneID:946071" - ], - [ - "gene_synonym", - "GI:16129476" - ] - ], - "dna_sequence": "ATGGCAGATTTAGACGATATTAAAGATGGTAAAGATTTTCGTACCGATCAACCGCAAAAAAATATCCCTTTTACCCTGAAAGGTTGCGGTGCGCTGGATTGGGGAATGCAGTCACGCTTATCGCGGATATTTAATCCGAAAACGGGTAAAACCGTGATGCTGGCTTTTGACCATGGTTATTTTCAGGGACCGACTACCGGACTTGAACGCATTGATATAAATATCGCCCCGCTGTTTGAACATGCCGATGTATTAATGTGTACGCGCGGCATTTTGCGCAGCGTAGTTCCCCCTGCGACCAATAGGCCGGTGGTACTGCGGGCGTCAGGTGCGAACTCTATTCTGGCGGAATTAAGTAATGAAGCCGTGGCGTTATCGATGGATGACGCCGTGCGCCTGAACAGTTGCGCGGTGGCGGCGCAGGTTTATATCGGCAGCGAATATGAACATCAGTCGATCAAAAATATTATTCAGCTGGTTGATGCCGGAATGAAAGTGGGAATGCCGACCATGGCCGTGACTGGCGTGGGCAAAGATATGGTGCGCGATCAGCGTTATTTCTCGCTCGCGACTCGAATCGCCGCTGAAATGGGGGCGCAAATTATCAAAACCTATTATGTCGAAAAAGGTTTTGAACGGATTGTTGCCGGATGTCCGGTACCCATTGTTATTGCTGGCGGTAAAAAATTACCGGAGCGCGAGGCGCTGGAAATGTGCTGGCAGGCTATCGATCAGGGCGCTTCTGGTGTGGATATGGGGCGTAATATTTTCCAGTCTGACCATCCGGTGGCGATGATGAAAGCCGTACAGGCGGTGGTTCACCATAACGAAACGGCTGATCGGGCATATGAACTCTATCTGAGTGAAAAACAGTAA", - "dna_sequence_length": 876, - "functions": [ - "putative autoinducer-2 (AI-2) aldolase" - ], - "id": "CDS_1503", - "location": [ - [ - "NC_000913", - 1606100, - "+", - 876 - ] - ], - "md5": "acd0e950e4eeb8f1cddc7a00cf6bf274", - "parent_gene": "", - "protein_md5": "466c700e81ac1678d53bc88c7e4df6dd", - "protein_translation": "MADLDDIKDGKDFRTDQPQKNIPFTLKGCGALDWGMQSRLSRIFNPKTGKTVMLAFDHGYFQGPTTGLERIDINIAPLFEHADVLMCTRGILRSVVPPATNRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYVEKGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHPVAMMKAVQAVVHHNETADRAYELYLSEKQ", - "protein_translation_length": 291, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1511" - ], - [ - "gene_synonym", - "lsrG" - ], - [ - "gene_synonym", - "JW1511" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64461" - ], - [ - "gene_synonym", - "ASAP:ABE-0005067" - ], - [ - "gene_synonym", - "EcoGene:EG13811" - ], - [ - "gene_synonym", - "NP_416035.1" - ], - [ - "gene_synonym", - "GeneID:946073" - ], - [ - "gene_synonym", - "yneC" - ], - [ - "gene_synonym", - "GI:16129477" - ], - [ - "gene_synonym", - "b1518" - ] - ], - "dna_sequence": "ATGCACGTCACACTGGTTGAAATTAACGTTCATGAAGACAAGGTTGACGAGTTTATCGAAGTTTTTCGCCAGAACCACCTGGGCTCTGTACAGGAAGAAGGCAATTTGCGCTTCGATGTCTTACAGGACCCGGAAGTGAATTCGCGCTTTTATATCTACGAAGCCTATAAAGATGAAGACGCAGTGGCGTTCCATAAAACCACGCCCCACTACAAAACCTGTGTCGCGAAACTGGAATCTTTAATGACCGGGCCGCGTAAAAAACGTCTGTTCAATGGTTTGATGCCGTGA", - "dna_sequence_length": 291, - "functions": [ - "autoinducer-2 (AI-2) degrading protein LsrG" - ], - "id": "CDS_1504", - "location": [ - [ - "NC_000913", - 1606999, - "+", - 291 - ] - ], - "md5": "42440114601099d944fe87e6bb59d9d8", - "parent_gene": "", - "protein_md5": "bc40d26e6f0eb4747f7ca30cf9c0f29c", - "protein_translation": "MHVTLVEINVHEDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQDPEVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTGPRKKRLFNGLMP", - "protein_translation_length": 96, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416036.1" - ], - [ - "gene_synonym", - "ECK1512" - ], - [ - "gene_synonym", - "lsrE" - ], - [ - "gene_synonym", - "GeneID:946074" - ], - [ - "gene_synonym", - "JW1512" - ], - [ - "gene_synonym", - "EcoGene:EG13812" - ], - [ - "gene_synonym", - "ASAP:ABE-0005070" - ], - [ - "gene_synonym", - "GI:16129478" - ], - [ - "gene_synonym", - "tam" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76145" - ], - [ - "gene_synonym", - "yneD" - ], - [ - "gene_synonym", - "b1519" - ] - ], - "dna_sequence": "ATGTCTGACTGGAACCCCTCTTTATATCTACACTTTTCCGCTGAACGATCGCGTCCGGCGGTGGAGCTGCTTGCCAGAGTGCCGCTGGAAAATGTCGAATATGTTGCCGATCTTGGCTGTGGCCCAGGTAACAGCACCGCCCTTCTACAACAACGTTGGCCTGCGGCCAGGATAACAGGCATCGACTCGTCTCCGGCGATGATTGCTGAAGCGCGCAGTGCTTTGCCAGACTGCCAGTTCGTGGAAGCAGACATCCGCAACTGGCAACCGGTACAGGCACTCGATCTGATTTTTGCTAATGCCTCACTGCAATGGCTGCCCGACCACTACGAATTGTTTCCTCATCTGGTTTCTTTACTTAATCCGCAGGGCGTGCTGGCAGTACAGATGCCAGATAACTGGCTGGAGCCGACCCATGTGCTCATGCGCGAAGTTGCCTGGGAACAAAACTACCCGGATCGCGGGCGTGAGCCGTTGGCTGGCGTTCATGCTTACTACGATATTTTGAGCGAAGCCGGATGTGAGGTCGATATCTGGCGAACCACCTACTATCACCAGATGCCGTCACACCAGGCGATTATCGATTGGGTGACTGCCACTGGATTACGTCCGTGGTTACAGGATCTGACCGAGAGCGAACAGCAGCTTTTTCTTAAGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAA", - "dna_sequence_length": 759, - "functions": [ - "trans-aconitate methyltransferase" - ], - "id": "CDS_1505", - "location": [ - [ - "NC_000913", - 1607346, - "+", - 759 - ] - ], - "md5": "04854fbe612c4013d4ff3cf6b9f0473d", - "parent_gene": "", - "protein_md5": "b77f1138e788d95be99dd42a9de71400", - "protein_translation": "MSDWNPSLYLHFSAERSRPAVELLARVPLENVEYVADLGCGPGNSTALLQQRWPAARITGIDSSPAMIAEARSALPDCQFVEADIRNWQPVQALDLIFANASLQWLPDHYELFPHLVSLLNPQGVLAVQMPDNWLEPTHVLMREVAWEQNYPDRGREPLAGVHAYYDILSEAGCEVDIWRTTYYHQMPSHQAIIDWVTATGLRPWLQDLTESEQQLFLKRYHQMLEEQYPLQENGQILLAFPRLFIVARRME", - "protein_translation_length": 252, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111287" - ], - [ - "gene_synonym", - "GeneID:946188" - ], - [ - "gene_synonym", - "NP_416037.2" - ], - [ - "gene_synonym", - "JW5245" - ], - [ - "gene_synonym", - "ECK1513" - ], - [ - "gene_synonym", - "ASAP:ABE-0005072" - ], - [ - "gene_synonym", - "EcoGene:EG13813" - ], - [ - "gene_synonym", - "b1520" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76146" - ], - [ - "gene_synonym", - "yneE" - ] - ], - "dna_sequence": "ATGATTGTTCGTCCACAACAACACTGGCTGCGCCGTATTTTTGTCTGGCACGGCTCAGTATTATCCAAGATATCCTCGCGCTTACTACTCAATTTTCTCTTTTCTATCGCTGTTATTTTCATGCTGCCCTGGTACACGCATCTGGGCATCAAATTCACCCTCGCACCGTTCAGCATTCTCGGTGTCGCCATCGCCATTTTTCTTGGTTTTCGTAATAATGCCGGGTACGCCCGTTACGTTGAAGCGCGAAAACTTTGGGGGCAGTTGATGATTGCCTCACGGTCGTTACTGCGCGAGGTAAAAACGACATTGCCGGATTCGGCAAGTGTAAGGGAGTTTGCCCGGCTGCAAATCGCTTTCGCCCACTGTTTACGCATGACATTACGCAAACAGCCACAGGCGGAAGTGCTGGCTCATTATCTCAAGACTGAAGATCTTCAGCGTGTACTGGCTTCGAACTCTCCAGCTAACCGTATCTTGTTAATAATGGGAGAATGGTTGGCGGTTCAGCGCCGCAATGGACAGCTTTCAGATATCCTGTTTATTAGCCTCAACGATCGGCTTAATGATATTTCAGCGGTCCTGGCAGGATGCGAGCGCATTGCCTATACGCCAATTCCCTTTGCCTACACCCTGATTTTGCATCGTACCGTTTATCTGTTTTGTATCATGCTGCCGTTCGCGCTGGTCGTGGACCTGCATTACATGACGCCTTTTATCTCTGTGCTGATTTCCTACACTTTTATTTCGCTGGATTGTCTGGCGGAAGAACTGGAAGATCCGTTCGGTACTGAAAACAATGATTTACCACTGGATGCCATCTGCAACGCTATTGAAATTGACCTGTTACAGATGAACGATGAAGCCGAAATTCCAGCAAAAATTCTTCCCGATCGTCATTACCAGCTGACGTGA", - "dna_sequence_length": 915, - "functions": [ - "bestrophin family putative inner membrane protein" - ], - "id": "CDS_1506", - "location": [ - [ - "NC_000913", - 1609022, - "-", - 915 - ] - ], - "md5": "11bdc40dc6e52fd512cde975032e5cbc", - "parent_gene": "", - "protein_md5": "3249c2a0451c6979bae4e13cf7c4b8cd", - "protein_translation": "MIVRPQQHWLRRIFVWHGSVLSKISSRLLLNFLFSIAVIFMLPWYTHLGIKFTLAPFSILGVAIAIFLGFRNNAGYARYVEARKLWGQLMIASRSLLREVKTTLPDSASVREFARLQIAFAHCLRMTLRKQPQAEVLAHYLKTEDLQRVLASNSPANRILLIMGEWLAVQRRNGQLSDILFISLNDRLNDISAVLAGCERIAYTPIPFAYTLILHRTVYLFCIMLPFALVVDLHYMTPFISVLISYTFISLDCLAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDEAEIPAKILPDRHYQLT", - "protein_translation_length": 304, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1514" - ], - [ - "gene_synonym", - "ECK1514" - ], - [ - "gene_synonym", - "b1521" - ], - [ - "gene_synonym", - "GI:49176119" - ], - [ - "gene_synonym", - "YP_025302.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0005076" - ], - [ - "gene_synonym", - "GeneID:945542" - ], - [ - "gene_synonym", - "uxaB" - ], - [ - "gene_synonym", - "EcoGene:EG11065" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6L7" - ] - ], - "dna_sequence": "GTGAAAACACTAAATCGTCGCGATTTTCCCGGTGCACAGTATCCAGAACGTATCATTCAGTTTGGTGAAGGTAACTTCCTGCGCGCCTTTGTTGACTGGCAAATCGATCTCCTGAATGAGCACACCGATCTGAATTCTGGCGTGGTCGTTGTTCGTCCGATTGAAACTTCATTCCCGCCGTCACTGAGCACGCAGGATGGTCTGTACACCACCATTATCCGTGGCCTGAATGAGAAGGGGGAAGCGGTCAGCGACGCGCGTCTGATTCGCTCGGTTAATCGTGAAATCAGCGTCTACAGTGAATACGATGAATTCCTGAAACTGGCGCACAACCCGGAAATGCGCTTTGTTTTCTCTAACACCACCGAAGCGGGTATCAGCTACCATGCGGGCGATAAATTCGATGACGCGCCAGCGGTAAGCTATCCGGCAAAACTGACCCGTCTGCTGTTCGAACGCTTTAGCCATTTCAACGGTGCGCTGGATAAAGGTTGGATCATCATTCCGTGTGAGTTGATTGACTACAATGGCGACGCGTTGCGTGAACTGGTGCTGCGCTATGCGCAAGAGTGGGCACTGCCAGAAGCATTTATTCAATGGCTGGATCAGGCTAACAGCTTCTGTTCTACGCTGGTGGACCGTATCGTTACCGGTTATCCGCGCGATGAAGTGGCTAAACTGGAAGAAGAACTGGGTTATCACGATGGTTTTCTCGACACCGCTGAACACTTTTACCTGTTTGTGATTCAGGGACCGAAATCCTTAGCGACTGAACTGCGTCTGGACAAATATCCGCTCAACGTGCTGATTGTTGACGATATTAAACCGTACAAAGAACGCAAAGTGGCAATCCTCAACGGTGCGCACACCGCGCTGGTGCCGGTGGCGTTCCAGGCAGGGCTGGATACCGTAGGTGAAGCGATGAACGATGCTGAAATTTGCGCATTCGTTGAAAAAGCTATCTACGAAGAAATTATTCCGGTACTGGATTTGCCTCGTGATGAACTGGAATCTTTCGCCAGTGCAGTCACCGGGCGTTTCCGTAACCCGTACATTAAGCATCAGCTGCTGTCTATCGCGCTCAACGGTATGACCAAGTTCCGCACCCGCATCCTGCCACAGCTGCTGGCAGGGCAGAAGGCAAACGGCACACTTCCGGCGCGCCTTACTTTCGCATTAGCGGCATTGATTGCGTTCTATCGTGGTGAGCGTAACGGCGAAACATATCCGGTACAGGACGATGCACACTGGCTGGAACGTTATCAGCAACTCTGGAGCCAGCATCGTGACCGTGTTATCGGCACCCAGGAACTGGTAGCGATTGTTTTGGCAGAAAAAGACCACTGGGAGCAGGACCTGACGCAAGTGCCTGGTCTGGTCGAGCAGGTTGCTAATGACCTGGATGCGATTCTCGAAAAAGGGATGCGCGAAGCTGTACGTCCGTTGTGCTAA", 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"UniProtKB/Swiss-Prot:P76147" - ], - [ - "gene_synonym", - "GeneID:947422" - ], - [ - "gene_synonym", - "b1522" - ], - [ - "gene_synonym", - "EcoGene:EG13814" - ], - [ - "gene_synonym", - "GI:16129481" - ], - [ - "gene_synonym", - "ASAP:ABE-0005081" - ], - [ - "gene_synonym", - "yneF" - ], - [ - "gene_synonym", - "JW5825" - ] - ], - "dna_sequence": "TTGCTTGCGGACTGGTTCAGTGAGCAATTCTCAACGGGCGTGTTGATCGTGCCTTGTATGCTGACGTTGGCTATTCCTGGAGTGCTGCCGCGCTTTAAAGCAGAACAGATGATGCCCGCCATCGCGCTTATTGTGTCGGTTATTGCCTCGGTAGTCATTGGCGGAGCGGGGAGTCTGGCGTTCCCGCTGCCTGCATTAATCTGGTGTGCAGTGCGCTATACGCCGCAGGTAACATGTCTGTTGACCTTTGTCACCGGTGCGGTGGAAATCGTACTGGTGGCAAATTCGGTGATTGATATCTCGGTCGGTTCGCCGTTCTCCATTCCGCAAATGTTCTCCGCACGTCTCGGTATTGCCACGATGGCGATATGCCCAATTATGGTTTCTTTTAGCGTGGCAGCGATCAATTCGCTAATGAAGCAAGTTGCGCTGCGAGCCGACTTTGATTTTCTGACTCAGGTTTACTCACGGTCCGGTCTTTATGAGGCGCTGAAAAGTCCATCGCTGAAACAGACACAACATCTGACTGTCATGCTGCTTGATATCGACTATTTCAAAAGCATTAACGATAACTATGGACATGAATGTGGCGATAAAGTGTTAAGCGTGTTTGCCCGGCATATTCAGAAGATTGTCGGTGATAAGGGGCTGGTGGCGCGAATGGGCGGCGAAGAATTTGCTGTTGCAGTGCCGTCGGTGAATCCTGTCGATGGTCTGCTAATGGCGGAAAAAATCCGTAAAGGCGTTGAACTGCAACCATTCACCTGGCAACAAAAAACGCTTTATCTCACGGTAAGTATTGGCGTCGGTAGTGGTCGCGCATCGTACCTAACGCTGACCGATGACTTTAATAAATTGATGGTCGAAGCCGATACGTGTCTGTATCGCTCGAAGAAAGATGGGCGCAACCGTACCAGCACTATGCGTTACGGTGAGGAAGTTGTCTGA", - "dna_sequence_length": 948, - "functions": [ - "putative membrane-bound diguanylate cyclase" - ], - "id": "CDS_1508", - "location": [ - [ - "NC_000913", - 1611854, - "-", - 948 - ] - ], - "md5": "55e19692ee62181138828d1b219835a4", - "parent_gene": "", - "protein_md5": "0afc34881eada4d2ebde56e2a306650f", - "protein_translation": "MLADWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAFPLPALIWCAVRYTPQVTCLLTFVTGAVEIVLVANSVIDISVGSPFSIPQMFSARLGIATMAICPIMVSFSVAAINSLMKQVALRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTVMLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYLTLTDDFNKLMVEADTCLYRSKKDGRNRTSTMRYGEEVV", - "protein_translation_length": 315, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1516" - ], - [ - "gene_synonym", - "ECK1516" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76148" - ], - [ - "gene_synonym", - "b1523" - ], - [ - "gene_synonym", - "GeneID:946171" - ], - [ - "gene_synonym", - "GI:16129482" - ], - [ - "gene_synonym", - "EcoGene:EG13815" - ], - [ - "gene_synonym", - "NP_416040.1" - ], - [ - "gene_synonym", - "yneG" - ], - [ - "gene_synonym", - "ASAP:ABE-0005084" - ] - ], - "dna_sequence": "ATGCAGTCTCTCGATCCACTCTTCGCGCGTTTATCCCGTTCAAAATTTCGCTCTCGCTTTCGTCTGGGCATGAAAGAGCGTCAGTATTGCCTGGAGAAAGGCGCGCCAGTCATCGAACAACATGCGGCGGATTTTGTCGCTAAACGTCTTGCTCCGGCATTACCGGCTAATGACGGTAAGCAAACCCCCATGCGCGGGCATCCGGTGTTTATCGCTCAGCACGCCACCGCGACCTGCTGTCGCGGTTGTCTGGCTAAGTGGCATAACATTCCGCAGGGTGTTTCGTTAAGCGAAGAACAACAACGTTATATCGTGGCGGTAATCTATCACTGGCTGGTTGTACAGATGAATCAGCCATGA", - "dna_sequence_length": 360, - "functions": [ - "DUF4186 family protein" - ], - "id": "CDS_1509", - "location": [ - [ - "NC_000913", - 1612325, - "-", - 360 - ] - ], - "md5": "86f92c7a8ede5c60e35d457308605a91", - "parent_gene": "", - "protein_md5": "f27d652a5e1da40754052365306a6c70", - "protein_translation": "MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVVQMNQP", - "protein_translation_length": 119, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1517" - ], - [ - "gene_synonym", - "ECK1517" - ], - [ - "gene_synonym", - "NP_416041.1" - ], - [ - "gene_synonym", - "glsA2" - ], - [ - "gene_synonym", - "glsB" - ], - [ - "gene_synonym", - "GeneID:944973" - ], - [ - "gene_synonym", - "yneH" - ], - [ - "gene_synonym", - "EcoGene:EG13816" - ], - [ - "gene_synonym", - "GI:16129483" - ], - [ - "gene_synonym", - "b1524" - ], - [ - "gene_synonym", - "ASAP:ABE-0005086" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6W0" - ] - ], - "dna_sequence": "GTGGCAGTCGCCATGGATAATGCAATTTTAGAAAACATCTTGCGGCAAGTGCGGCCGCTCATTGGTCAGGGTAAAGTCGCGGATTATATTCCGGCGCTGGCTACAGTAGACGGTTCCCGATTGGGGATTGCTATCTGTACCGTTGACGGACAGCTTTTTCAGGCCGGAGACGCGCAAGAACGTTTTTCCATTCAGTCTATTTCCAAAGTGCTGAGTCTCGTTGTCGCCATGCGTCATTACTCCGAAGAGGAAATCTGGCAACGCGTCGGCAAAGATCCGTCTGGATCACCGTTCAATTCCTTAGTGCAACTGGAAATGGAGCAGGGTATACCGCGTAATCCGTTCATTAATGCCGGTGCGCTGGTGGTCTGCGATATGTTGCAAGGGCGATTAAGCGCACCACGGCAACGTATGCTGGAAGTCGTGCGCGGCTTAAGCGGTGTGTCTGATATTTCCTACGATACGGTGGTAGCGCGTTCCGAATTTGAACATTCCGCGCGAAATGCGGCTATCGCCTGGCTGATGAAGTCGTTTGGCAATTTCCATCATGACGTGACAACCGTTCTGCAAAACTACTTTCATTACTGCGCTCTGAAAATGAGCTGTGTAGAGCTGGCCCGGACGTTTGTCTTTCTGGCTAATCAGGGGAAAGCTATTCATATTGATGAACCAGTGGTGACGCCAATGCAGGCGCGGCAAATTAACGCGCTGATGGCGACCAGTGGTATGTACCAGAACGCGGGGGAGTTTGCCTGGCGGGTGGGGCTACCGGCGAAATCTGGCGTTGGTGGCGGTATTGTGGCGATTGTTCCGCATGAAATGGCCATCGCTGTCTGGAGTCCGGAACTGGATGATGCAGGTAACTCGCTTGCGGGTATTGCCGTTCTTGAACAATTGACGAAACAGTTAGGGCGTTCGGTTTATTAA", - "dna_sequence_length": 927, - "functions": [ - "glutaminase 2" - ], - "id": "CDS_1510", - "location": [ - [ - "NC_000913", - 1613251, - "-", - 927 - ] - ], - "md5": "25612ed9568f11f56e103b3ab5fc3d05", - "parent_gene": "", - "protein_md5": "aa8e8e7ebdcc5c6fefedf51fccc1889f", - "protein_translation": "MAVAMDNAILENILRQVRPLIGQGKVADYIPALATVDGSRLGIAICTVDGQLFQAGDAQERFSIQSISKVLSLVVAMRHYSEEEIWQRVGKDPSGSPFNSLVQLEMEQGIPRNPFINAGALVVCDMLQGRLSAPRQRMLEVVRGLSGVSDISYDTVVARSEFEHSARNAAIAWLMKSFGNFHHDVTTVLQNYFHYCALKMSCVELARTFVFLANQGKAIHIDEPVVTPMQARQINALMATSGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAIAVWSPELDDAGNSLAGIAVLEQLTKQLGRSVY", - "protein_translation_length": 308, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947440" - ], - [ - "gene_synonym", - "JW5247" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76149" - ], - [ - "gene_synonym", - "ECK1518" - ], - [ - "gene_synonym", - "NP_416042.2" - ], - [ - "gene_synonym", - "GI:90111288" - ], - [ - "gene_synonym", - "sad" - ], - [ - "gene_synonym", - "yneI" - ], - [ - "gene_synonym", - "EcoGene:EG13817" - ], - [ - "gene_synonym", - "b1525" - ], - [ - "gene_synonym", - "ASAP:ABE-0005092" - ] - ], - "dna_sequence": "ATGACCATTACTCCGGCAACTCATGCAATTTCGATAAATCCTGCCACGGGTGAACAACTTTCTGTGCTGCCGTGGGCTGGCGCTGACGATATCGAAAACGCACTTCAGCTGGCGGCAGCAGGCTTTCGCGACTGGCGCGAGACAAATATAGATTATCGTGCTGAAAAACTGCGTGATATCGGTAAGGCTCTGCGCGCTCGTAGCGAAGAAATGGCGCAAATGATCACCCGCGAAATGGGCAAACCAATCAACCAGGCGCGCGCTGAAGTGGCGAAATCGGCGAATTTGTGTGACTGGTATGCAGAACATGGTCCGGCAATGCTGAAGGCGGAACCTACGCTGGTGGAAAATCAGCAGGCGGTTATTGAGTATCGACCGTTGGGGACGATTCTGGCGATTATGCCGTGGAATTTTCCGTTATGGCAGGTGATGCGTGGCGCTGTTCCCATCATTCTTGCAGGTAACGGCTACTTACTTAAACATGCGCCGAATGTGATGGGCTGTGCACAGCTCATTGCCCAGGTGTTTAAAGATGCGGGTATCCCACAAGGCGTATATGGCTGGCTGAATGCCGACAACGACGGTGTCAGTCAGATGATTAAAGACTCGCGCATTGCTGCTGTCACGGTGACCGGAAGTGTTCGTGCGGGAGCGGCTATTGGCGCACAGGCTGGAGCGGCACTGAAAAAATGCGTACTGGAACTGGGCGGTTCGGATCCGTTTATTGTGCTTAACGATGCCGATCTGGAACTGGCGGTGAAAGCGGCGGTAGCCGGACGTTATCAGAATACCGGACAGGTATGTGCAGCGGCAAAACGCTTTATTATCGAAGAGGGAATTGCTTCGGCATTTACCGAACGTTTTGTGGCAGCTGCGGCAGCCTTGAAAATGGGCGATCCCCGTGACGAAGAGAACGCTCTCGGACCAATGGCTCGTTTTGATTTACGTGATGAGCTGCATCATCAGGTGGAGAAAACCCTGGCGCAGGGTGCGCGTTTGTTACTGGGCGGGGAAAAGATGGCTGGGGCAGGTAACTACTATCCGCCAACGGTTCTGGCGAATGTTACCCCAGAAATGACCGCGTTTCGGGAAGAAATGTTTGGCCCCGTTGCGGCAATCACCATTGCGAAAGATGCAGAACATGCACTGGAACTGGCTAATGATAGTGAGTTCGGCCTTTCAGCGACCATTTTTACCACTGACGAAACACAGGCCAGACAGATGGCGGCACGTCTGGAATGCGGTGGGGTGTTTATCAATGGTTATTGTGCCAGCGACGCGCGAGTGGCCTTTGGTGGCGTGAAAAAGAGTGGCTTTGGTCGTGAGCTTTCCCATTTCGGCTTACACGAATTCTGTAATATCCAGACGGTGTGGAAAGACCGGATCTGA", 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"gene_synonym", - "JW1519" - ], - [ - "gene_synonym", - "yneJ" - ], - [ - "gene_synonym", - "GeneID:946079" - ], - [ - "gene_synonym", - "GI:16129485" - ], - [ - "gene_synonym", - "NP_416043.1" - ], - [ - "gene_synonym", - "EcoGene:EG13818" - ], - [ - "gene_synonym", - "ASAP:ABE-0005096" - ], - [ - "gene_synonym", - "b1526" - ] - ], - "dna_sequence": "ATGGATCTGACCCAACTGGAGATGTTCAACGCGGTTGCCGAAGCTGGCAGCATAACCCAGGCTGCAGCAAAAGTGCATCGCGTGCCGTCGAATCTCACTACCCGTCTGCGCCAGCTGGAAACAGAACTGGGGGTTGATCTGTTTATTCGCGAGAATCAGCGTTTACGTCTCTCTCCTGCCGGGCATAACTTTTTACGCTATAGCCAACAAATTCTCGCGTTAGTGGATGAAGCGCGGAGCGTTGTCGCTGGCGATGAGCCGCAAGGTTTATTTTCTCTTGGTTCGCTGGAAAGCACCGCTGCAGTGCGCATTCCAGCCACGCTGGCGGAATTCAACCGTCGTTATCCCAAAATTCAGTTTTCACTTTCCACCGGCCCTTCCGGCACTATGCTGGATGGTGTACTGGAGGGAAAACTGAATGCGGCGTTTATTGATGGACCCATTAACCATACTGCCATCGACGGGATACCGGTATACCGCGAGGAACTGATGATCGTCACGCCACAAGGATATGCGCCAGTAACCCGTGCCAGTCAGGTTAATGGCAGTAACATTTATGCCTTCCGCGCCAATTGTTCGTATCGTCGCCACTTCGAGAGCTGGTTTCATGCTGACGGTGCCGCTCCGGGAACTATCCATGAGATGGAGTCTTATCACGGAATGTTGGCCTGTGTGATCGCAGGAGCAGGCATTGCGCTTATTCCGCGCTCTATGCTGGAAAGTATGCCGGGGCATCACCAGGTTGAAGCGTGGCCGTTAGCTGAGCAATGGCGTTGGTTAACAACCTGGCTGGTCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGA", - "dna_sequence_length": 882, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_1512", - "location": [ - [ - "NC_000913", - 1614804, - "+", - 882 - ] - ], - "md5": "be320d03cdb608a93c6453145916db62", - "parent_gene": "", - "protein_md5": "52ed9bd70ee7a8206fa3a397f5a745bf", - "protein_translation": "MDLTQLEMFNAVAEAGSITQAAAKVHRVPSNLTTRLRQLETELGVDLFIRENQRLRLSPAGHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTAAVRIPATLAEFNRRYPKIQFSLSTGPSGTMLDGVLEGKLNAAFIDGPINHTAIDGIPVYREELMIVTPQGYAPVTRASQVNGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESYHGMLACVIAGAGIALIPRSMLESMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTRPLEAFIQLLDVPDSARQGYQ", - "protein_translation_length": 293, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1520" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76150" - ], - [ - "gene_synonym", - "NP_416044.1" - ], - [ - "gene_synonym", - "JW1520" - ], - [ - "gene_synonym", - "GI:16129486" - ], - [ - "gene_synonym", - "yneK" - ], - [ - "gene_synonym", - "b1527" - ], - [ - "gene_synonym", - "ASAP:ABE-0005100" - ], - [ - "gene_synonym", - "EcoGene:EG13819" - ], - [ - "gene_synonym", - "GeneID:946080" - ] - ], - "dna_sequence": "ATGGTTACGCCAGTAAGCATCAGCAATTACATATCTCTTCCTGATGATTTTCCCGTACGTAATATTGCACCGCAGGTAAAAGAAGTTTTAAAGGATTTTATTGATGCACTTAGTACAATAATATGTAATGAAGAGTGGCGCACGTCTTTAAACATCAACTCAGCCACAAAAAAGATATTTAATAACCTTGACAACTTATCATATATTCAGAGGACTTCTTTTCGGGGTAACGACACGCTATACAATGAAAAGGTTCAGTTTAAACTCACTTATCCCGCCAGGAATGGAAGACACAAAGAAAATATTGAATTTCAGGTAGTAATAAATTTAAGCCCTATTTATTTAGATAATTTTCGCCATGATGGAGAAATTAATATTTTTTGCGCTCCCAACCCAAAGCCTGTCACTATGGGGCGCGTATTTCAGACCGGCGTCGAGCGTGTACTCTTTCTGTTTCTGAATGATTTTATTGAACAATTTCCAATGATCAACCCTGGTGTTCCCATCAAAAGAGCGCATACACCACATATTGAACCCCTGCCTTCGGATCACCATACCGCTGCAGATTACTTACGCCAGTTTGATTTGCTTGTCCTGAATTTTATCTCTCGCGGTAATTTTGTCATACTCCCCCGATTATGGAATAACTCTGAGGTTCACAGATGGTTCGTCAATAAAGATCCTAACTTGATCACCGCCATTCTCGACATAACGGACAGCGAATTAAAAGAGGATTTGTTGCAAAGCCTGATGGATTCATTAGGTTCTAACAAACATGTACTACCCGAAGTCTGCATCTGCTTTTTATCCCTTTTAGCAGAACAAGAATCTCCTCATTTTCAGAACTTGTTTTTATTTTTCGCCAATATGTTATTGCACTATCACCAATTTATGAATCCCAATGAAAGTGATTTGAATGACGTGTTGATGCCAGCATCATTAAGTGATGATAAAATTATCAAACATATGGCGCGCAGGACCCTCAAACTGTTTGTAAAAAATGAAACACCGCCAAAAGTTACTCACGAAGACCTGGTGAAAAACAGGCCTCGCTCCCCTGTCAGACCACCTATACCCGCAACCGCCAAAACGCCAGACCTCCCTGAACGTCATTAA", 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"gene_synonym", - "GI:16129487" - ], - [ - "gene_synonym", - "EcoGene:EG11636" - ], - [ - "gene_synonym", - "ASAP:ABE-0005103" - ], - [ - "gene_synonym", - "b1528" - ], - [ - "gene_synonym", - "GeneID:947218" - ], - [ - "gene_synonym", - "ydeA" - ] - ], - "dna_sequence": "ATGACAACAAACACTGTTTCCCGCAAAGTGGCGTGGCTACGGGTCGTTACGCTGGCAGTCGCCGCCTTCATCTTCAACACCACCGAATTTGTCCCTGTTGGCCTGCTCTCTGACATTGCGCAAAGTTTTCACATGCAAACCGCTCAGGTCGGCATCATGTTGACCATTTACGCATGGGTAGTAGCGCTAATGTCATTGCCTTTTATGTTAATGACCAGTCAGGTTGAACGGCGCAAATTACTGATCTGCCTGTTTGTGGTGTTTATTGCCAGCCACGTACTGTCGTTTTTGTCGTGGAGCTTTACCGTTCTGGTGATCAGTCGCATTGGTGTGGCTTTTGCACATGCGATTTTCTGGTCGATTACGGCGTCTCTGGCGATCCGTATGGCTCCGGCCGGGAAGCGAGCACAGGCATTGAGTTTAATTGCCACCGGTACAGCACTGGCGATGGTCTTAGGTTTACCTCTCGGGCGCATTGTGGGCCAGTATTTCGGTTGGCGAATGACCTTCTTCGCGATTGGTATTGGGGCGCTTATCACCCTTTTGTGCCTGATTAAGTTACTTCCCTTACTGCCCAGTGAGCATTCCGGTTCACTGAAAAGCCTCCCGCTATTGTTCCGCCGCCCGGCATTGATGAGCATTTATTTGTTAACTGTGGTGGTTGTCACCGCCCATTACACGGCATACAGCTATATCGAGCCTTTTGTACAAAACATTGCGGGATTCAGCGCCAACTTTGCCACGGCATTACTGTTATTACTCGGTGGTGCGGGCATTATTGGCAGCGTGATTTTCGGTAAACTGGGTAATCAGTATGCGTCTGCGTTGGTGAGTACGGCGATTGCGCTGTTGCTGGTGTGCCTGGCATTGCTGTTACCTGCGGCGAACAGTGAAATACACCTCGGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTGGTAGGTAATCAGGTGAGTTTGCACTGGTCAATGTCGATGATTGGTTATGTGGGCGCGGTGCCTGCTTTTGCCGCGTTAATTTGGTCAATCATTATATTTCGCCGCTGGCCAGTGACACTCGAAGAACAGACGCAATAG", 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"EcoGene:EG11637" - ], - [ - "gene_synonym", - "NP_416046.1" - ], - [ - "gene_synonym", - "GI:16129488" - ], - [ - "gene_synonym", - "b1529" - ], - [ - "gene_synonym", - "ASAP:ABE-0005106" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEY1" - ], - [ - "gene_synonym", - "ydeB" - ], - [ - "gene_synonym", - "ydeC" - ] - ], - "dna_sequence": "ATGTTAGATTTGTTTAAAGCAATTGGCCTGGGGCTGGTGGTGTTGCTGCCGTTAGCTAACCCATTAACAACTGTCGCGTTATTTCTTGGCCTGGCAGGCAACATGAACAGTGCCGAACGTAATCGTCAGTCGTTGATGGCCTCGGTGTACGTATTTGCCATCATGATGGTGGCGTATTACGCCGGGCAACTGGTGATGGATACATTTGGCATTTCGATTCCCGGTCTGCGAATTGCAGGCGGCTTAATCGTCGCGTTTATCGGTTTTCGGATGCTCTTTCCGCAACAGAAAGCGATTGATTCACCGGAGGCGAAAAGCAAGTCGGAAGAGCTGGAAGATGAACCCAGTGCCAATATTGCCTTTGTGCCGCTGGCAATGCCAAGTACTGCCGGTCCGGGAACCATAGCGATGATTATTAGCTCGGCGTCCACAGTGCGTCAGAGTTCAACCTTCGCTGATTGGGTACTGATGGTTGCGCCGCCGCTGATCTTTTTCCTGGTGGCGGTTATTTTGTGGGGAAGCCTACGCAGCTCCGGCGCAATTATGCGGCTGGTGGGCAAGGGTGGCATTGAAGCGATCTCCCGTCTGATGGGATTCCTGCTGGTATGTATGGGTGTGCAGTTTATTATTAACGGCATCCTGGAAATCATTAAAACGTACCATTAA", - "dna_sequence_length": 666, - "functions": [ - "UPF0056 family inner membrane protein" - ], - "id": "CDS_1515", - "location": [ - [ - "NC_000913", - 1618908, - "-", - 666 - ] - ], - "md5": "74e3c3ed2ca2e45ecee0f549c6b2222c", - "parent_gene": "", - "protein_md5": "35b1c7934308c66f9597dc4890ca4134", - "protein_translation": "MLDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQSLMASVYVFAIMMVAYYAGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAIDSPEAKSKSEELEDEPSANIAFVPLAMPSTAGPGTIAMIISSASTVRQSSTFADWVLMVAPPLIFFLVAVILWGSLRSSGAIMRLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIIKTYH", - "protein_translation_length": 221, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945825" - ], - [ - "gene_synonym", - "ECK1523" - ], - [ - "gene_synonym", - "GI:90111289" - ], - [ - "gene_synonym", - "JW5248" - ], - [ - "gene_synonym", - "EcoGene:EG11435" - ], - [ - "gene_synonym", - "inaR" - ], - [ - "gene_synonym", - "NP_416047.4" - ], - [ - "gene_synonym", - "marR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27245" - ], - [ - "gene_synonym", - "cfxB" - ], - [ - "gene_synonym", - "soxQ" - ], - [ - "gene_synonym", - "b1530" - ], - [ - "gene_synonym", - "ASAP:ABE-0005110" - ] - ], - "dna_sequence": "GTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCTCTGCTCTATCCGCTGCGCGGCGTGTATTACTCCGGTTGAACTGAAAAAGGTATTGTCGGTCGACCTGGGAGCACTGACCCGTATGCTGGATCGCCTGGTCTGTAAAGGCTGGGTGGAAAGGTTGCCGAACCCGAATGACAAGCGCGGCGTACTGGTAAAACTTACCACCGGCGGCGCGGCAATATGTGAACAATGCCATCAATTAGTTGGCCAGGACCTGCACCAAGAATTAACAAAAAACCTGACGGCGGACGAAGTGGCAACACTTGAGTATTTGCTTAAGAAAGTCCTGCCGTAA", - "dna_sequence_length": 435, - "functions": [ - "transcriptional repressor of multiple antibiotic resistance" - ], - "id": "CDS_1516", - "location": [ - [ - "NC_000913", - 1619120, - "+", - 435 - ] - ], - "md5": "26ec616c07b6d2cdada49c4f1ebcff8e", - "parent_gene": "", - "protein_md5": "cad395e3116df1c3d268532f0e9da79b", - "protein_translation": "MKSTSDLFNEIIPLGRLIHMVNQKKDRLLNEYLSPLDITAAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICEQCHQLVGQDLHQELTKNLTADEVATLEYLLKKVLP", - "protein_translation_length": 144, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1524" - ], - [ - "gene_synonym", - "GeneID:947613" - ], - [ - "gene_synonym", - "marA" - ], - [ - "gene_synonym", - "NP_416048.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACH5" - ], - [ - "gene_synonym", - "EcoGene:EG11434" - ], - [ - "gene_synonym", - "JW5249" - ], - [ - "gene_synonym", - "inaR" - ], - [ - "gene_synonym", - "norB" - ], - [ - "gene_synonym", - "nfxC" - ], - [ - "gene_synonym", - "cfxB" - ], - [ - "gene_synonym", - "GI:90111290" - ], - [ - "gene_synonym", - "soxQ" - ], - [ - "gene_synonym", - "b1531" - ], - [ - "gene_synonym", - "ASAP:ABE-0005112" - ] - ], - "dna_sequence": "ATGTCCAGACGCAATACTGACGCTATTACCATTCATAGCATTTTGGACTGGATCGAGGACAACCTGGAATCGCCACTGTCACTGGAGAAAGTGTCAGAGCGTTCGGGTTACTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAAACCGGTCATTCATTAGGCCAATACATCCGCAGCCGTAAGATGACGGAAATCGCGCAAAAGCTGAAGGAAAGTAACGAGCCGATACTCTATCTGGCAGAACGATATGGCTTCGAGTCGCAACAAACTCTGACCCGAACCTTCAAAAATTACTTTGATGTTCCGCCGCATAAATACCGGATGACCAATATGCAGGGCGAATCGCGCTTTTTACATCCATTAAATCATTACAACAGCTAG", - "dna_sequence_length": 384, - "functions": [ - "multiple antibiotic resistance transcriptional regulator" - ], - "id": "CDS_1517", - "location": [ - [ - "NC_000913", - 1619574, - "+", - 384 - ] - ], - "md5": "d4be510a166d98be296501d35ae7d2f6", - "parent_gene": "", - "protein_md5": "df3a48ee6cec33ee2e1d9770bc0ac91f", - "protein_translation": "MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLHPLNHYNS", - "protein_translation_length": 127, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11599" - ], - [ - "gene_synonym", - "ECK1525" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31121" - ], - [ - "gene_synonym", - "marB" - ], - [ - "gene_synonym", - "GeneID:946184" - ], - [ - "gene_synonym", - "JW1525" - ], - [ - "gene_synonym", - "GI:16129491" - ], - [ - "gene_synonym", - "ASAP:ABE-0005114" - ], - [ - "gene_synonym", - "b1532" - ], - [ - "gene_synonym", - "NP_416049.1" - ] - ], - "dna_sequence": "ATGAAACCACTTTCATCCGCAATAGCAGCTGCGCTTATTCTCTTTTCCGCGCAGGGCGTTGCGGAACAAACCACGCAGCCAGTTGTTACTTCTTGTGCCAATGTCGTGGTTGTTCCCCCATCGCAGGAACACCCACCGTTTGATTTAAATCACATGGGTACTGGCAGTGATAAGTCGGATGCGCTCGGCGTGCCCTATTATAATCAACACGCTATGTAG", - "dna_sequence_length": 219, - "functions": [ - "periplasmic mar operon regulator" - ], - "id": "CDS_1518", - "location": [ - [ - "NC_000913", - 1619989, - "+", - 219 - ] - ], - "md5": "8d1293ef8a8d4ca3e5bfc8e3bfe0c2f0", - "parent_gene": "", - "protein_md5": "bf83c4375b5b050103db9a8628dcecd1", - "protein_translation": "MKPLSSAIAAALILFSAQGVAEQTTQPVVTSCANVVVVPPSQEHPPFDLNHMGTGSDKSDALGVPYYNQHAM", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5250" - ], - [ - "gene_synonym", - "ECK1526" - ], - [ - "gene_synonym", - "ASAP:ABE-0005116" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31125" - ], - [ - "gene_synonym", - "EcoGene:EG11639" - ], - [ - "gene_synonym", - "eamA" - ], - [ - "gene_synonym", - "NP_416050.4" - ], - [ - "gene_synonym", - "GeneID:946081" - ], - [ - "gene_synonym", - "ydeD" - ], - [ - "gene_synonym", - "GI:90111291" - ], - [ - "gene_synonym", - "b1533" - ] - ], - "dna_sequence": "ATGTCGCGAAAAGATGGGGTGTTGGCGCTACTGGTAGTGGTCGTATGGGGGCTAAATTTTGTGGTCATCAAAGTGGGGCTTCATAACATGCCACCGCTGATGCTGGCCGGTTTGCGCTTTATGCTGGTCGCTTTTCCGGCTATCTTTTTTGTCGCACGACCGAAAGTACCACTGAATTTGCTGCTGGGGTATGGATTAACCATCAGTTTTGCGCAGTTTGCTTTTCTTTTTTGTGCCATTAACTTCGGTATGCCTGCTGGACTGGCTTCGCTGGTGTTACAGGCACAGGCGTTTTTTACTATCATGCTTGGCGCGTTTACTTTCGGGGAGCGACTGCATGGCAAACAATTGGCGGGGATCGCCTTAGCGATTTTTGGCGTACTGGTGTTAATCGAAGATAGTCTGAACGGTCAGCATGTGGCGATGCTCGGCTTTATGTTGACCCTGGCGGCAGCATTTAGTTGGGCGTGTGGCAACATCTTCAATAAAAAGATCATGTCGCACTCAACGCGTCCGGCGGTGATGTCGCTGGTAATCTGGAGCGCTTTAATCCCAATCATTCCCTTCTTTGTTGCCTCGCTGATTCTCGATGGTTCCGCAACCATGATTCACAGTCTGGTTACTATCGATATGACCACCATCTTGTCTCTGATGTATCTGGCGTTTGTGGCGACAATTGTTGGTTATGGGATCTGGGGGACGTTACTGGGACGCTATGAAACCTGGCGGGTTGCACCGTTATCGTTACTGGTGCCCGTAGTAGGACTGGCAAGTGCGGCACTATTGTTGGATGAACGCTTAACGGGTCTGCAATTTTTAGGTGCGGTGCTCATTATGACCGGGCTGTATATCAATGTATTTGGCTTGCGGTGGCGTAAAGCGGTAAAGGTGGGAAGTTAA", - "dna_sequence_length": 900, - "functions": [ - "cysteine and O-acetyl-L-serine efflux system" 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- "b1534" - ], - [ - "gene_synonym", - "ydeE" - ], - [ - "gene_synonym", - "ydeF" - ] - ], - "dna_sequence": "ATGAACTTATCCCTACGACGCTCTACCAGCGCCCTTCTTGCCTCGTCGTTGTTATTAACCATCGGACGCGGCGCTACGCTGCCATTTATGACCATTTACTTGAGTCGCCAGTACAGCCTGAGTGTCGATCTAATCGGTTATGCGATGACAATTGCGCTCACTATTGGCGTCGTTTTTAGCCTCGGTTTTGGTATCCTGGCGGATAAGTTCGACAAGAAACGCTATATGTTACTGGCAATTACCGCCTTCGCCAGCGGTTTTATTGCCATTACTTTAGTGAATAACGTGACGCTGGTTGTGCTCTTTTTTGCCCTCATTAACTGCGCCTATTCTGTTTTTGCTACCGTGCTGAAAGCCTGGTTTGCCGACAATCTTTCGTCCACCAGCAAAACGAAAATCTTCTCAATCAACTACACCATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCACGCTGTTGGTAATGCAGAGCATCAATCTGCCCTTCTGGCTGGCAGCTATCTGTTCCGCGTTTCCCATGCTTTTCATTCAAATTTGGGTAAAGCGCAGCGAGAAAATCATCGCCACGGAAACAGGCAGTGTCTGGTCGCCGAAAGTTTTATTACAAGATAAAGCACTGTTGTGGTTTACCTGCTCTGGTTTTCTGGCTTCTTTTGTAAGCGGCGCATTTGCTTCATGCATTTCACAATATGTGATGGTGATTGCTGATGGGGATTTTGCCGAAAAGGTGGTCGCGGTTGTTCTTCCGGTGAATGCTGCCATGGTGGTTACGTTGCAATATTCCGTGGGCCGCCGACTTAACCCGGCTAACATCCGCGCGCTGATGACAGCAGGCACCCTCTGTTTCGTCATCGGTCTGGTCGGTTTTATTTTTTCCGGCAACAGCCTGCTATTGTGGGGTATGTCAGCTGCGGTATTTACTGTCGGTGAAATCATTTATGCGCCGGGCGAGTATATGTTGATTGACCATATTGCGCCGCCAGAAATGAAAGCCAGCTATTTTTCCGCCCAGTCTTTAGGCTGGCTTGGTGCCGCGATTAACCCATTAGTGAGTGGCGTAGTGCTAACCAGCCTGCCGCCTTCCTCGCTGTTTGTCATCTTAGCGTTGGTGATCATTGCTGCGTGGGTGCTGATGTTAAAAGGGATTCGAGCAAGACCGTGGGGGCAGCCCGCGCTTTGTTGA", 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"GI:145698263" - ], - [ - "gene_synonym", - "yneM" - ], - [ - "gene_synonym", - "GeneID:5061497" - ], - [ - "gene_synonym", - "ECK4409" - ] - ], - "dna_sequence": "ATGCTGGGTAATATGAATGTTTTTATGGCCGTACTGGGAATAATTTTATTTTCTGGTTTTCTGGCCGCGTATTTCAGCCACAAATGGGATGACTAA", - "dna_sequence_length": 96, - "functions": [ - "inner membrane-associated protein" - ], - "id": "CDS_1521", - "location": [ - [ - "NC_000913", - 1622646, - "+", - 96 - ] - ], - "md5": "645e37325a8515d0e963cba7c41d33c8", - "parent_gene": "", - "protein_md5": "45194fb9a5e7b56a3187457fd9b976bb", - "protein_translation": "MLGNMNVFMAVLGIILFSGFLAAYFSHKWDD", - "protein_translation_length": 31, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416052.1" - ], - [ - "gene_synonym", - "JW1528" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31129" - ], - [ - "gene_synonym", - "ECK1528" - ], - [ - "gene_synonym", - "EcoGene:EG11643" - ], - [ - "gene_synonym", - "ydeH" - ], - [ - "gene_synonym", - "GI:16129494" - ], - [ - "gene_synonym", - "ASAP:ABE-0005123" - ], - [ - "gene_synonym", - "dgcZ" - ], - [ - "gene_synonym", - "b1535" - ], - [ - "gene_synonym", - "ydeG" - ], - [ - "gene_synonym", - "GeneID:946075" - ] - ], - "dna_sequence": "ATGATCAAGAAGACAACGGAAATTGATGCCATCTTGTTAAATCTCAATAAGGCTATCGATGCCCACTACCAGTGGCTGGTGAGTATGTTTCACAGCGTGGTCGCGAGAGATGCCAGTAAGCCAGAAATAACGGATAACCATTCTTATGGACTGTGCCAGTTTGGTCGGTGGATTGATCATCTGGGGCCACTCGATAACGATGAATTACCTTACGTTCGGCTAATGGATTCTGCCCATCAACATATGCATAACTGTGGTCGGGAATTAATGCTGGCTATTGTTGAAAATCACTGGCAGGACGCGCATTTCGACGCCTTTCAGGAGGGGTTGCTTTCTTTTACTGCGGCATTAACCGATTACAAAATTTATTTGCTGACGATCCGTAGCAATATGGATGTTTTGACGGGATTGCCGGGTCGTCGGGTTCTTGATGAATCCTTTGATCATCAGTTACGCAACGCTGAGCCTCTGAATCTTTATTTAATGTTGTTGGATATTGACCGATTTAAATTGGTTAATGATACCTACGGGCATTTAATCGGCGATGTAGTATTACGCACCCTGGCAACTTACTTAGCCAGTTGGACGCGTGATTACGAAACGGTTTATCGCTACGGGGGCGAAGAATTTATCATTATTGTCAAAGCGGCTAATGATGAAGAAGCATGTCGTGCAGGTGTCAGAATTTGCCAGTTAGTCGATAACCATGCCATCACACATTCTGAAGGGCATATCAACATTACCGTGACAGCAGGTGTGAGTCGCGCATTTCCTGAAGAGCCTCTGGATGTGGTCATTGGAAGAGCGGACCGGGCAATGTATGAGGGTAAGCAAACCGGAAGAAATCGCTGCATGTTTATTGACGAACAAAATGTGATTAACCGAGTTTAA", - "dna_sequence_length": 891, - "functions": [ - "diguanylate cyclase, zinc-sensing" - ], - "id": "CDS_1522", - "location": [ - [ - "NC_000913", - 1623850, - "-", - 891 - ] - ], - "md5": "3496e7a4f6d152ef71f7ccb452dd5a79", - "parent_gene": "", - "protein_md5": "7c35f953fbd5e02085ca5a182ddbfcf0", - "protein_translation": "MIKKTTEIDAILLNLNKAIDAHYQWLVSMFHSVVARDASKPEITDNHSYGLCQFGRWIDHLGPLDNDELPYVRLMDSAHQHMHNCGRELMLAIVENHWQDAHFDAFQEGLLSFTAALTDYKIYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV", - "protein_translation_length": 296, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11644" - ], - [ - "gene_synonym", - "JW1529" - ], - [ - "gene_synonym", - "ECK1529" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31130" - ], - [ - "gene_synonym", - "ASAP:ABE-0005127" - ], - [ - "gene_synonym", - "GI:16129495" - ], - [ - "gene_synonym", - "NP_416054.1" - ], - [ - "gene_synonym", - "b1536" - ], - [ - "gene_synonym", - "GeneID:946068" - ], - [ - "gene_synonym", - "ydeI" - ] - ], - "dna_sequence": "ATGAAATTTCAGGCCATTGTATTAGCAAGTTTTCTTGTCATGCCTTATGCGTTGGCAGATGACCAGGGCGGTTTAAAACAGGATGCAGCGCCACCGCCGCCTCATGCAATAGAAGATGGCTATCGCGGAACCGATGATGCAAAAAAAATGACCGTTGATTTCGCAAAAACCATGCACGATGGCGCTTCGGTTTCACTACGCGGTAATTTGATTTCTCACAAAGGAGAGGACCGTTACGTTTTTCGCGATAAGAGCGGTGAAATTAATGTCGTTATTCCTGCGGCCGTCTTTGATGGACGAGAAGTTCAGCCGGACCAGATGATCAACATTAGTGGCAGTCTGGATAAGAAAAGCGCGCCGGCCGTCGTTCGGGTCACTCATTTGCAGAAATAA", - "dna_sequence_length": 393, - "functions": [ - "hydrogen peroxide resistance OB fold protein", - "putative periplasmic protein" - ], - "id": "CDS_1523", - "location": [ - [ - "NC_000913", - 1624497, - "-", - 393 - ] - ], - "md5": "49231f0a008f2664c460f81fd0d5791c", - "parent_gene": "", - "protein_md5": "284b226642be9589cc326bc25d089e6a", - "protein_translation": "MKFQAIVLASFLVMPYALADDQGGLKQDAAPPPPHAIEDGYRGTDDAKKMTVDFAKTMHDGASVSLRGNLISHKGEDRYVFRDKSGEINVVIPAAVFDGREVQPDQMINISGSLDKKSAPAVVRVTHLQK", - "protein_translation_length": 130, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1530" - ], - [ - "gene_synonym", - "ASAP:ABE-0005131" - ], - [ - "gene_synonym", - "ECK1530" - ], - [ - "gene_synonym", - "NP_416055.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31131" - ], - [ - "gene_synonym", - "GeneID:946067" - ], - [ - "gene_synonym", - "EcoGene:EG11645" - ], - [ - "gene_synonym", - "ydeJ" - ], - [ - "gene_synonym", - "GI:16129496" - ], - [ - "gene_synonym", - "b1537" - ] - ], - "dna_sequence": "GTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAAGACTTATCGCGGATCAATTACGCTTAACTACCGCCGAATCATGCACCGGCGGTAAGTTGGCTAGCGCCCTGTGTGCAGCTGAAGATACACCCAAATTTTACGGTGCAGGCTTTGTTACTTTCACCGATCAGGCAAAGATGAAAATCCTCAGCGTAAGCCAGCAATCTCTTGAACGATATTCTGCGGTGAGTGAGAAAGTGGCAGCAGAAATGGCAACCGGTGCCATAGAGCGTGCGGATGCTGATGTCAGTATTGCCATTACCGGCTACGGCGGACCGGAGGGCGGTGAAGATGGTACGCCAGCGGGTACCGTCTGGTTTGCGTGGCATATTAAAGGCCAGAACTACACTGCGGTTATGCATTTTGCTGGCGACTGCGAAACGGTATTAGCTTTAGCGGTGAGGTTTGCCCTCGCCCAGCTGCTGCAATTACTGCTATAA", - "dna_sequence_length": 519, - "functions": [ - "inactive PncC family protein" - ], - "id": "CDS_1524", - "location": [ - [ - "NC_000913", - 1624773, - "+", - 519 - ] - ], - "md5": "0e74dd1896a08443528b55dc84ab6d51", - "parent_gene": "", - "protein_md5": "ada93817b834e45a9dda42ede4b6dd8a", - "protein_translation": "MNINRDKIVQLVDTDTIENLTSALSQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFYGAGFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAIERADADVSIAITGYGGPEGGEDGTPAGTVWFAWHIKGQNYTAVMHFAGDCETVLALAVRFALAQLLQLLL", - "protein_translation_length": 172, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1531" - ], - [ - "gene_synonym", - "ECK1531" - ], - [ - "gene_synonym", - "NP_416056.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24171" - ], - [ - "gene_synonym", - "EcoGene:EG10212" - ], - [ - "gene_synonym", - "b1538" - ], - [ - "gene_synonym", - "GeneID:946084" - ], - [ - "gene_synonym", - "GI:16129497" - ], - [ - "gene_synonym", - "ASAP:ABE-0005133" - ], - [ - "gene_synonym", - "dcp" - ] - ], - "dna_sequence": "ATGACAACAATGAATCCTTTCCTTGTGCAAAGCACACTGCCGTATCTGGCTCCCCATTTTGATCAAATTGCCAATCATCACTATCGCCCGGCATTCGATGAGGGAATGCAGCAAAAGCGGGCAGAAATTGCTGCCATCGCGCTTAACCCGCAAATGCCTGATTTCAACAATACTATTCTGGCACTGGAACAAAGCGGAGAATTACTTACCCGCGTTACCAGCGTCTTTTTTGCGATGACTGCGGCGCATACCAATGATGAATTACAGCGTCTTGACGAGCAGTTTTCCGCTGAACTGGCGGAACTGGCTAATGATATCTATCTGAACGGTGAATTATTCGCGCGGGTAGATGCTGTCTGGCAGCGCCGTGAATCCCTGGGGCTTGATAGTGAATCCATCCGCCTGGTGGAGGTGATTCATCAACGTTTTGTCCTTGCCGGAGCCAAACTTGCGCAAGCTGATAAAGCAAAATTAAAAGTACTGAATACAGAAGCTGCGACCCTGACCAGCCAGTTTAACCAGCGATTACTGGCAGCAAATAAATCCGGCGGTCTGGTTGTGAACGATATCGCGCAGCTGGCAGGAATGAGTGAGCAAGAGATTGCGCTGGCGGCAGAGGCGGCTCGCGAGAAAGGTCTGGATAACAAATGGCTGATTCCGCTGCTGAATACCACCCAACAACCGGCGCTTGCCGAAATGCGCGATCGTGCGACGCGTGAAAAACTGTTTATTGCGGGCTGGACGCGAGCGGAAAAAAATGATGCCAATGATACCCGCGCTATCATTCAACGTCTGGTGGAGATCCGTGCACAACAGGCAACACTACTTGGTTTTCCTCATTATGCCGCATGGAAAATCGCCGATCAGATGGCAAAAACACCTGAAGCAGCACTTAACTTTATGCGGGAAATTGTTCCAGCGGCGCGTCAACGTGCGAGCGATGAATTAGCCTCCATACAGGCGGTTATCGATAAGCAGCAGGGCGGGTTTAGCGCGCAGCCGTGGGACTGGGCATTTTATGCGGAACAGGTACGGCGGGAGAAATTTGATCTTGATGAGGCGCAGCTCAAGCCATATTTTGAATTAAACACGGTGTTAAATGAAGGTGTATTCTGGACCGCGAATCAGCTCTTCGGTATTAAGTTTGTCGAACGTTTTGATATTCCTGTCTACCATCCTGACGTTCGTGTGTGGGAAATTTTTGATCATAATGGCGTGGGGCTGGCGTTATTTTACGGTGATTTCTTCGCCCGTGATTCAAAAAGCGGCGGTGCATGGATGGGCAATTTTGTTGAGCAATCAACGCTTAATAAAACACATCCGGTAATTTATAACGTCTGCAATTATCAGAAACCCGCTGCCGGTGAGCCTGCGTTGTTACTCTGGGATGATGTCATAACCTTATTCCATGAATTTGGTCATACGCTGCACGGCCTTTTTGCCCGCCAGCGTTATGCCACGCTTTCCGGCACCAACACGCCGCGTGATTTTGTCGAATTTCCGTCGCAAATCAACGAACACTGGGCAACGCATCCGCAGGTATTCGCTCGCTACGCCCGGCATTATCAGAGCGGGGCAGCAATGCCTGACGAACTGCAACAGAAAATGCGTAATGCCAGCCTGTTCAACAAAGGGTATGAGATGAGCGAACTGCTTAGCGCCGCACTTCTCGATATGCGCTGGCATTGCCTGGAAGAAAACGAAGCAATGCAGGATGTCGATGATTTTGAATTGCGGGCGCTGGTGGCGGAAAATATGGATCTTCCTGCTATACCGCCACGCTATCGCAGCAGTTATTTCGCCCATATTTTTGGTGGCGGATATGCTGCAGGTTATTACGCTTATCTGTGGACGCAAATGTTGGCCGATGATGGTTATCAGTGGTTTGTTGAGCAGGGCGGATTAACGCGTGAAAATGGGCTGCGTTTTCGCGAGGCGATCCTTTCCAGAGGTAACAGCGAAGATCTGGAACGCCTGTATCGACAATGGCGCGGTAAGGCACCTAAGATTATGCCGATGCTGCAACATCGTGGCTTGAACATATAA", 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"MTTMNPFLVQSTLPYLAPHFDQIANHHYRPAFDEGMQQKRAEIAAIALNPQMPDFNNTILALEQSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAELANDIYLNGELFARVDAVWQRRESLGLDSESIRLVEVIHQRFVLAGAKLAQADKAKLKVLNTEAATLTSQFNQRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAAREKGLDNKWLIPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQATLLGFPHYAAWKIADQMAKTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQPWDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVFWTANQLFGIKFVERFDIPVYHPDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTLNKTHPVIYNVCNYQKPAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYATLSGTNTPRDFVEFPSQINEHWATHPQVFARYARHYQSGAAMPDELQQKMRNASLFNKGYEMSELLSAALLDMRWHCLEENEAMQDVDDFELRALVAENMDLPAIPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADDGYQWFVEQGGLTRENGLRFREAILSRGNSEDLERLYRQWRGKAPKIMPMLQHRGLNI", - "protein_translation_length": 681, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ydfG" - ], - [ - "gene_synonym", - "ECK1532" - ], - [ - "gene_synonym", - "EcoGene:EG12345" - ], - [ - "gene_synonym", - "JW1532" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39831" - ], - [ - "gene_synonym", - "ASAP:ABE-0005137" - ], - [ - "gene_synonym", - "b1539" - ], - [ - "gene_synonym", - "GI:16129498" - ], - [ - "gene_synonym", - "NP_416057.1" - ], - [ - "gene_synonym", - "GeneID:946085" - ] - ], - "dna_sequence": "ATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCGCCACTGGCCGTCGCCAGGAACGGTTGCAGGAGTTAAAAGACGAACTGGGAGATAATCTGTATATCGCCCAACTGGACGTTCGCAACCGCGCCGCTATTGAAGAGATGCTGGCATCGCTTCCTGCCGAGTGGTGCAATATTGATATCCTGGTAAATAATGCCGGCCTGGCGTTGGGCATGGAGCCTGCGCATAAAGCCAGCGTTGAAGACTGGGAAACGATGATTGATACCAACAACAAAGGCCTGGTATATATGACGCGCGCCGTCTTACCGGGTATGGTTGAACGTAATCATGGTCATATTATTAACATTGGCTCAACGGCAGGTAGCTGGCCGTATGCCGGTGGTAACGTTTACGGTGCGACGAAAGCGTTTGTTCGTCAGTTTAGCCTGAATCTGCGTACGGATCTGCATGGTACGGCGGTGCGCGTCACCGACATCGAACCGGGTCTGGTGGGTGGTACCGAGTTTTCCAATGTCCGCTTTAAAGGCGATGACGGTAAAGCAGAAAAAACCTATCAAAATACCGTTGCATTGACGCCAGAAGATGTCAGCGAAGCCGTCTGGTGGGTGTCAACGCTGCCTGCTCACGTCAATATCAATACCCTGGAAATGATGCCGGTTACCCAAAGCTATGCCGGACTGAATGTCCACCGTCAGTAA", - "dna_sequence_length": 747, - "functions": [ - "NADP-dependent 3-hydroxy acid dehydrogenase", - "malonic semialdehyde reductase" - ], - "id": "CDS_1526", - "location": [ - [ - "NC_000913", - 1627517, - "+", - 747 - ] - ], - "md5": "1b863a7ba8f18d7ac9078b39ff91321e", - "parent_gene": "", - "protein_md5": "01c0a4d391cd4222f59c2cb2c5b1bea8", - "protein_translation": "MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQSYAGLNVHRQ", - "protein_translation_length": 248, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1533" - ], - [ - "gene_synonym", - "ECK1533" - ], - [ - "gene_synonym", - "NP_416058.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0005144" - ], - [ - "gene_synonym", - "rspR" - ], - [ - "gene_synonym", - "ydfH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACM2" - ], - [ - "gene_synonym", - "GI:16129499" - ], - [ - "gene_synonym", - "b1540" - ], - [ - "gene_synonym", - "EcoGene:EG13820" - ], - [ - "gene_synonym", - "GeneID:946087" - ] - ], - "dna_sequence": "ATGACCGTCGAAACGCAACTTAATCCCACACAGCCTGTCAATCAGCAGATTTATCGTATTCTTCGTCGCGACATTGTCCATTGCCTGATTGCTCCAGGCACACCGTTGTCGGAAAAAGAAGTTTCTGTTCGTTTCAATGTGTCACGCCAGCCGGTTCGTGAAGCCTTTATTAAACTGGCGGAAAACGGCCTGATTCAAATTCGTCCGCAACGTGGCAGCTACGTCAACAAAATTTCCATGGCCCAGGTGCGCAACGGCAGTTTTATCCGTCAGGCCATTGAGTGCGCGGTGGCGCGTCGGGCGGCGAGCATGATTACCGAAAGCCAGTGCTATCAACTGGAACAAAATCTTCACCAGCAACGCATTGCCATTGAGCGCAAGCAACTGGATGATTTTTTTGAACTTGATGACAACTTCCATCAACTCCTGACGCAGATTGCCGACTGTCAACTGGCGTGGGATACCATTGAGAACCTGAAAGCGACCGTTGATCGCGTGCGCTATATGAGTTTCGACCACGTTTCTCCACCAGAAATGCTGTTACGCCAGCATCTTGATATTTTCTCTGCCCTGCAAAAACGTGATGGCGATGCGGTAGAACGTGCAATGACGCAACATTTGCAGGAAATCAGCGAATCCGTGCGCCAGATCCGCCAGGAAAACAGCGACTGGTTTAGCGAAGAGTAA", - "dna_sequence_length": 687, - "functions": [ - "transcriptional repressor for rspAB" - ], - "id": "CDS_1527", - "location": [ - [ - "NC_000913", - 1628352, - "+", - 687 - ] - ], - "md5": "348b0b5c06ba69934377c5512bce2c6b", - "parent_gene": "", - "protein_md5": "d8e4d217b3abef1f1d4da4fef71a7ef7", - "protein_translation": "MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVRFNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAASMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLKATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVRQIRQENSDWFSEE", - "protein_translation_length": 228, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948796" - ], - [ - "gene_synonym", - "ECK1534" - ], - [ - "gene_synonym", - "JW1534" - ], - [ - "gene_synonym", - "ASAP:ABE-0005147" - ], - [ - "gene_synonym", - "NP_416059.1" - ], - [ - "gene_synonym", - "EcoGene:EG13838" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64463" - ], - [ - "gene_synonym", - "GI:16129500" - ], - [ - "gene_synonym", - "b1541" - ], - [ - "gene_synonym", - "ydfZ" - ] - ], - "dna_sequence": "ATGACGACCTACGATCGTAACCGTAACGCAATCACCACTGGCAGCCGTGTTATGGTTAGCGGCACCGGTCACACTGGCAAGATCCTGTCGATTGATACTGAAGGTCTGACCGCTGAGCAAATCCGCCGCGGAAAAACCGTAGTTGTTGAAGGTTGTGAAGAGAAACTGGCACCACTGGACCTGATTCGTCTCGGCATGAACTAA", - "dna_sequence_length": 204, - "functions": [ - "selenoprotein, function unknown" - ], - "id": "CDS_1528", - "location": [ - [ - "NC_000913", - 1629215, - "+", - 204 - ] - ], - "md5": "a544ecfebe5e5dc1d2d83d3d25a178c8", - "parent_gene": "", - "protein_md5": "38b616c6eef1665d15a0661efb303c4a", - "protein_translation": "MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRGKTVVVEGCEEKLAPLDLIRLGMN", - "protein_translation_length": 67, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1535" - ], - [ - "gene_synonym", - "GeneID:945861" - ], - [ - "gene_synonym", - "JW1535" - ], - [ - "gene_synonym", - "ASAP:ABE-0005149" - ], - [ - "gene_synonym", - "ydfI" - ], - [ - "gene_synonym", - "NP_416060.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77260" - ], - [ - "gene_synonym", - "GI:16129501" - ], - [ - "gene_synonym", - "EcoGene:EG13821" - ], - [ - "gene_synonym", - "b1542" - ] - ], - "dna_sequence": "ATGGGAAATAATTTGTTATCAGCAAAAGCGACACTCCCTGTTTATGATCTTAATAACCTGGCTCCAAGAATTGTTCATTTAGGCTTTGGTGCATTTCACCGTGCGCATCAGGGTGTGTATGCCGATATTCTTGCTACGGAACATTTCAGTGACTGGGGATATTATGAGGTCAACTTAATCGGCGGCGAACAGCAAATTGCCGATTTACAACAGCAAGATAATCTTTATACCGTTGCGGAAATGTCGGCCGATGTGTGGACGGCTCGCGTCGTTGGCGTCGTTAAAAAAGCCTTGCACGTACAGATAGATGGCTTAGAAACCGTGTTGGCAGCGATGTGTGAACCGCAAATCGCGATTGTCTCTCTGACAATCACCGAAAAAGGGTATTTCCACTCTCCGGCGACCGGACAGTTAATGCTCGATCACCCGATGGTAGCTGCCGACGTGCAAAATCCCCACCAGCCGAAAACAGCAACAGGGGTGATTGTTGAGGCGCTGGCTCGCCGTAAAGCGGCAGGACTTCCCGCATTTACCGTCATGTCATGTGACAACATGCCAGAAAACGGTCATGTTATGCGTGACGTTGTCACTTCCTACGCACAAGCCGTTGATGTAAAACTGGCACAATGGATCGAAGATAACGTGACTTTCCCATCAACAATGGTGGACCGTATTGTGCCCGCAGTGACAGAGGATACGCTGGCGAAAATCGAACAACTTACCGGTGTGCGCGATCCTGCGGGCGTTGCCTGTGAACCTTTCCGCCAGTGGGTAATAGAAGATAACTTTGTTGCCGGACGTCCGGAATGGGAAAAAGCGGGAGCCGAACTGGTTAGCGATGTGCTGCCTTATGAAGAGATGAAGTTGCGCATGCTCAACGGCAGTCATTCATTCCTGGCGTATCTGGGGTATCTTGCAGGATATCAGCACATTAATGACTGTATGGAAGATGAACATTATCGTTATGCGGCGTATGGCTTGATGTTGCAGGAACAAGCGCCGACGTTGAAAGTGCAGGGCGTTGATTTGCAAGATTACGCTAACCGATTAATTGCACGCTATAGCAACCCGGCGTTACGTCATCGAACCTGGCAGATTGCGATGGATGGTAGCCAGAAATTGCCACAGCGGATGTTGGATTCTGTTCGCTGGCATCTGGCGCATGACAGCAAGTTCGATCTGCTGGCGCTGGGCGTCGCGGGTTGGATGCGTTATGTCGGTGGTGTTGATGAACAGGGAAATCCGATAGAAATCAGTGACCCACTGTTACCTGTTATTCAGAAGGCTGTACAAAGTAGTGCCGAAGGGAAAGCGCGCGTCCAGTCATTGCTGGCGATTAAGGCGATCTTTGGTGATGATTTGCCAGACAATAGTTTGTTTACTGCAAGAGTGACGGAAACGTACTTGTCTTTATTAGCGCATGGCGCGAAAGCGACCGTGGCAAAATATTCCGTGAAGTAA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P77228" - ], - [ - "gene_synonym", - "b4600" - ], - [ - "gene_synonym", - "JW1536" - ], - [ - "gene_synonym", - "ASAP:ABE-0285055" - ], - [ - "gene_synonym", - "ynfP" - ], - [ - "gene_synonym", - "ASAP:ABE-0005152" - ], - [ - "gene_synonym", - "EcoGene:EG13822" - ], - [ - "gene_synonym", - "ydfJ" - ] - ], - "dna_sequence": "ATGACAATAGAAAAACACGAAAGAAGCACTAAGGATTTGGTGAAAGCAGCAGTATCGGGATGGCTGGGCACTGCGCTTGAATTTATGGATTTCCAGTTATATTCGCTCGGCGCAGCGTTAGTGTTTCATGAAATATTTTTTCCTGAATCATCAACGGCAATGGCGTTAATTCTGGCAATGGGAACCTACGGTGCAGGTTATGTGGCGCGTATTGTCGGAGCATTTATTTTCGGCAAAATGGGCGACAGAATAGGGCGTAAAAAAGTGCTCTTTATTACCATCACCATGATGGGGATCTGTACCACCTTAATTGGTGTGTTACCGACCTATGCACAGATTGGTGTTTTTGCACCCATCTTGCTGGTGACGTTGCGTATTATTCAGGGGTTGGGTGCAGGTGCGGAAATTTCCGGTGCCGGTACGATGCTGGCGGAATATGCGCCAAAAGGTAAGCGCGGAATTATCTCCTCATTTGTGGCTATGGGAACTAACTGCGGAACCTTGAGCGCAACGGCAATCTGGGCCTTTATGTTCTTCATTCTCAGTAAAGAGGAACTGCTGGCGTGGGGATGGCGTATACCGTTCCTGGCGAGTGTTGTCGTGATGGTCTTTGCTATCTGGTTGCGTATGAATCTGAAAGAAAGCCCGGTCTTTGAGAAGGTTAACGACAGTAACCAACCGACAGCAAAACCTGCACCTGCTGGTAGCATGTTCCAGAGCAAATCCTTCTGGCTGGCAACAGGGCTGCGTTTTGGTCAGGCGGGTAACTCCGGGTTAATTCAGACTTTCCTTGCAGGCTATTTAGTGCAGACGTTATTGTTTAACAAAGCAATTCCAACAGATGCATTGATGATCAGTTCGATTCTCGGCTTTATGACCATTCCGTTCCTTGGTTGGTTATCCGATAAAATTGGTCGCCGGATCCCGTATATTATTATGAATACCTCCGCGATTGTGCTGGCATGGCCAATGCTTTCTATCATTGTAGATAAAAGCTATGCCCCGAGCACCATTATGGTTGCACTGATTGTGATTCATAACTGTGCGGTGCTGGGATTATTTGCTCTGGAAAACATTACCATGGCAGAAATGTTCGGCTGTAAAAACCGCTTTACCCGGATGGCTATTTCTAAAGAAATTGGTGGTCTTATCGCTTCCGGTTTTGGTCCTATCCTGGCGGGTATTTTCTGCACCATGACGGAATCCTGGTATCCGATCGCCATTATGATCATGGCATATTCAGTGATTGGTTTAATCTCTGCGCTGAAAATGCCAGAGGTGAAAGACCGTGATTTAAGTGCGCTGGAAGACGCTGCGGAAGATCAACCGCGTGTTGTAAGAGCTGCGCAACCTTCCAGAAGTCTGTAA", 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"gene_synonym", - "JW1537" - ], - [ - "gene_synonym", - "ASAP:ABE-0005161" - ], - [ - "gene_synonym", - "ydfK" - ], - [ - "gene_synonym", - "b1544" - ], - [ - "gene_synonym", - "GI:345452719" - ], - [ - "gene_synonym", - "EcoGene:EG13823" - ], - [ - "gene_synonym", - "NP_416062.2" - ] - ], - "dna_sequence": "ATGAAATCAAAAGACACCCTAAAGTGGTTCCCTGCGCAGCTTCCTGAAGTAAGAATTATCCTAGGGGATGCTGTAGTGGAAGTAGCAAAACAGGGAAGACCTATCAATACCAGAACATTGCTTGATTACATTGAAGGAAACATAAAGAAAAAATCATGGCTGGATAACAAAGAATTATTACAAACAGCGATATCAGTTCTTAAAGACAACCAAAATTTAAATGGTAAAATGTAA", - "dna_sequence_length": 234, - "functions": [ - "cold shock protein, function unknown, Qin prophage" - ], - "id": "CDS_1531", - "location": [ - [ - "NC_000913", - 1633072, - "+", - 234 - ] - ], - "md5": "976ead483e4cba8ccaa85ec8499080d0", - "parent_gene": "", - "protein_md5": "46715fe43daa0cbd8fc3c820c9995fe1", - "protein_translation": "MKSKDTLKWFPAQLPEVRIILGDAVVEVAKQGRPINTRTLLDYIEGNIKKKSWLDNKELLQTAISVLKDNQNLNGKM", - "protein_translation_length": 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"ATGTCTCAAATTTTTGCTTACTGTCGGATATCAACGCTGGATCAGACCACCGAAAATCAACGCCGGGAAATCGAAAGTGCAGGTTTTAAAATCAAACCTCAGCAAATAATCGAAGAACACATTAGCGGCTCAGCAGCAACCAGTGAGCGTCCTGGTTTTAACCGGTTGCTTGCTCGCCTGAAATGTGGTGATCAATTGATTGTGACAAAACTGGATCGCCTTGGTTGTAATGCAATGGATATCAGGAAAACAGTGGAACAACTGACCGAAACAGGTATCAGAGTGCATTGCTTAGCATTGGGGGGCATTGACCTGACCAGTCCAACAGGAAAAATGATGATGCAAGTAATTTCAGCAGTCGCTGAATTTGAACGAGACCTTTTACTTGAACGCACTCATTCCGGGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGACACCTGACATATAA", - "dna_sequence_length": 591, - "functions": [ - "Qin prophage", - "putative site-specific recombinase" - ], - "id": "CDS_1532", - "location": [ - [ - "NC_000913", - 1633622, - "+", - 591 - ] - ], - "md5": "bf236e4614b6478bd31bf84eed814610", - "parent_gene": "", - "protein_md5": "5bfe4bbd45a003a725f7a51a17773030", - "protein_translation": "MSQIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416064.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76155" - ], - [ - "gene_synonym", - "ydfM" - ], - [ - "gene_synonym", - "JW1539" - ], - [ - "gene_synonym", - "ECK1539" - ], - [ - "gene_synonym", - "GI:16129505" - ], - [ - "gene_synonym", - "GeneID:946060" - ], - [ - "gene_synonym", - "ASAP:ABE-0005166" - ], - [ - "gene_synonym", - "tfaQ" - ], - [ - "gene_synonym", - "EcoGene:EG13825" - ], - [ - "gene_synonym", - "b1546" - ] - ], - "dna_sequence": "ATGGCATTCAGAATGAGTGAACAACCACGGACCATAAAAATTTATAATCTGCTGGCCGGAACTAATGAATTTATTGGTGAAGGTGATGCATATATTCCGCCTCATACAGGTCTGCCAGCAAACAGTACCGATATTGCACCGCCAGATATTCCGGCTGGCTTCGTGGCTGTTTTCAACAGTGATGAGTCATCGTGGCATCTCGTTGAAGATCATCGGGGTAAAACGGTTTATGACGTGGCTTCCGGCGACGCGTTATTTATTTCTGAACTCGGTCCGTTACCGGAAAATGTTACCTGGTTATCGCCGGAAGGGGAGTTTCAGAAGTGGAACGGCACAGCCTGGGTGAAGGATACGGAAGCAGAAAAACTGTTCCGGATCCGGGAGGCGGAAGAAACAAAAAACAACCTGATGCAGGTAGCCAGTGAGCATATTGCGCCGCTTCAGGATGCTGCAGATCTGGAAATTGCAACGGAGGAAGAAATCTCGTTGCTGGAAGCATGGAAAAAGTATCGGGTATTGCTGAACCGTGTTGATACGTCAACTGCACAGGATATTGAATGGCCAGCACTGCCGTAG", - "dna_sequence_length": 576, - "functions": [ - "Qin prophage", - "putative tail fibre assembly protein" - ], - "id": "CDS_1533", - "location": [ - [ - "NC_000913", - 1634885, - "-", - 576 - ] - ], - "md5": "2d987e4c73388b7dedfc234f9913662b", - "parent_gene": "", - "protein_md5": "4efdaab75d1fcbb284629af2a4b94c94", - "protein_translation": "MAFRMSEQPRTIKIYNLLAGTNEFIGEGDAYIPPHTGLPANSTDIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVASGDALFISELGPLPENVTWLSPEGEFQKWNGTAWVKDTEAEKLFRIREAEETKNNLMQVASEHIAPLQDAADLEIATEEEISLLEAWKKYRVLLNRVDTSTAQDIEWPALP", - "protein_translation_length": 191, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005168" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77515" - ], - [ - "gene_synonym", - "GeneID:946098" - ], - [ - "gene_synonym", - "JW1540" - ], - [ - "gene_synonym", - "ydfN" - ], - [ - "gene_synonym", - "NP_416065.1" - ], - [ - "gene_synonym", - "GI:16129506" - ], - [ - "gene_synonym", - "ECK1540" - ], - [ - "gene_synonym", - "stfQ" - ], - [ - "gene_synonym", - "EcoGene:EG13826" - ], - [ - "gene_synonym", - "b1547" - ] - ], - "dna_sequence": "GTGAATATAACCGCGCTGACAGACAATACGCAGGGGGCAGCAGGTCTTGAGTTATACGAGGTGTATAACAACGGATATCCAACAGCGTATGGAAATATCATTCACCTGAAAGGGATGACAGCCGTTGGCGAAGGTGAGTTACTCATCGGCTGGAGTGGTACAAGCGGTGCTCATGCTCCGGCATTTATTCGTTCACGACGGGATACGACCGACGCAAACTGGTCGCCGTGGGCGCAGCTTTACACCTCGGCTCATCCTCCTGCAGAGTTTTATCCAGTCGGTGCACCAATCCCGTGGCCATCAGATACCGTTCCGTCTGGTTATGCCCTGATGCAGGGGCAGACTTTTGACAAATCTGCATACCCGAAACTTGCAGTTGCTTATCCGTCAGGCGTGATCCCTGATATGCGTGGCTGGACGATTAAGGGCAAGCCCGCCAGTGGTCGGGCCGTATTATCTCAGGAACAGGACGGCATTAAATCGCACACCCACAGCGCCAGCGCATCCAGTACGGATTTGGGGACGGAAACCACATCGTCGTTTGATTACGGAACCAAATCCACGAATAACACCGGGGCGCATACCCATAGTATTAGCGGGACCGCAAATAGTGCCGGTGCGCACCAACACAAGAGTTCCGGTGCATTTGGTGGCACGAACACGAGCATTTTCCCTAATGGTTATACCGCGATTTCAAATCTAAGCGCGGGGATTATGAGCACAACAAGCGGTAGTGGCCAGACTCGTAATGCAGGGAAGACATCATCAGATGGTGCTCATACCCACTCGCTGTCCGGCACTGCTGCAAGCGCAGGCGCGCATGCACATACTGTCGGTATTGGTGCTCATACGCACTCCGTTGCGATTGGTTCACATGGACACACCATCACCGTTAACGCTGCTGGTAACGCGGAAAACACCGTCAAAAACATCGCATTTAACTATATTGTGAGGCTTGCATAA", - "dna_sequence_length": 963, - "functions": [ - "Qin prophage", - "putative side tail fibre assembly protein" - ], - "id": "CDS_1534", - "location": [ - [ - "NC_000913", - 1635847, - "-", - 963 - ] - ], - "md5": "8a22e0c137989f4aeb181ed3ebffe973", - "parent_gene": "", - "protein_md5": "9e71b7f79667044f3af8f5fd073ad501", - "protein_translation": "MNITALTDNTQGAAGLELYEVYNNGYPTAYGNIIHLKGMTAVGEGELLIGWSGTSGAHAPAFIRSRRDTTDANWSPWAQLYTSAHPPAEFYPVGAPIPWPSDTVPSGYALMQGQTFDKSAYPKLAVAYPSGVIPDMRGWTIKGKPASGRAVLSQEQDGIKSHTHSASASSTDLGTETTSSFDYGTKSTNNTGAHTHSISGTANSAGAHQHKSSGAFGGTNTSIFPNGYTAISNLSAGIMSTTSGSGQTRNAGKTSSDGAHTHSLSGTAASAGAHAHTVGIGAHTHSVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA", - "protein_translation_length": 320, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "nohQ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31061" - ], - [ - "gene_synonym", - "JW1541" - ], - [ - "gene_synonym", - "ASAP:ABE-0005172" - ], - [ - "gene_synonym", - "EcoGene:EG11634" - ], - [ - "gene_synonym", - "nohA" - ], - [ - "gene_synonym", - "b1548" - ], - [ - "gene_synonym", - "ECK1541" - ], - [ - "gene_synonym", - "GeneID:946021" - ] - ], - "dna_sequence": "ATGGAAGTCAACAAAAAGCAGCTGGCTGACATTTTCGGTGCGAGTATCCGTACCATTCAGAACTGGCAGGAACAGGGAATGCCCGTTCTGCGAGGCGGTGGCAAGGGTAATGAGGTGCTTTATGACTCTGCCGCCGTTATAAGATGGTATGCCGAAAGGGATGCTGAAATTGAGAACGAAAAGCTGCGCCGGGAAGTTGAAGAACTGCGGCAGGCCAGCGAGACAGATCTCCAGCCAGGGACTATTGAGTACGAACGCCATCGACTTACGCGTGCGCAGGCCGACGCACAGGAGCTGAAAAATGCCAGAGACTCCGCTGAAGTGGTGGAAACCGCATTCTGTACTTTCGTGCTGTCGCGGATCGCAGGTGAAATTGCCAGTATTCTCGACGGGATCCCCCTGTCGGTGCAGCGGCGTTTTCCGGAACTGGAAAACCGACATGTTGATTTCCTGAAACGGGATATCATCAAAGCCATGAACAAAGCAGCCGCGCTGGATGAACTGATACCGGGGTTGCTGAGTGAATAT", - "dna_sequence_length": 528, - "id": "CDS_1535", - "location": [ - [ - "NC_000913", - 1636367, - "-", - 528 - ] - ], - "md5": "4276c16cf44bcca8d935b1ff3fb91469", - "parent_gene": "", - "protein_md5": "daf5198d16f1564414447c0e7db215ea", - "protein_translation": "MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIRWYAERDAEIENEKLRREVEELRQASETDLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEY", - "protein_translation_length": 176, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5251" - ], - [ - "gene_synonym", - "ECK1542" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q2EES0" - ], - [ - "gene_synonym", - "YP_588454.1" - ], - [ - "gene_synonym", - "ynfO" - ], - [ - "gene_synonym", - "EcoGene:EG14422" - ], - [ - "gene_synonym", - "ASAP:ABE-0285054" - ], - [ - "gene_synonym", - "GeneID:1450267" - ], - [ - "gene_synonym", - "b4533" - ], - [ - "gene_synonym", - "GI:94541112" - ] - ], - "dna_sequence": "ATGTCAACGAAGAACAGAACCCGCAGAACAACAACCCGCAACATCCGCTTTCCTAACCAAATGATTGAACAAATTAACATCGCTCTTGAGCAAAAAGGGTCCGGGAATTTCTCAGCCTGGGTCATTGAAGCCTGCCGCCGGAGACTGTGCTCAGAAAAAAGAGTTTCTTCTGAAGCAAACAAAGAAAAGAGTGACATTACTGAATTGCTCAGAAAACAGGTCAGACCAGATTGA", - "dna_sequence_length": 234, - "functions": [ 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"ATGGATCAGGTAGTCATTTTTAAACAAATATTTGATAAAGTTCGAAACGATTTAAACTATCAATGGTTTTATTCTGAGCTAAAACGTCACAATGTCTCACATTACATTTACTATTTAGCCACAGAGAATGTTCATATTGTATTAAAAAATGATAATACAGTGTTATTAAAGGGCCTAAAAAACATTGTGTCTGTCAAATTTTCAAAGGATAGGCATCTTATAGAAACGACCTCTAATAAGCTGAAATCCAGAGAGATCACATTTCAGGAATACAGAAGAAACCTTGCTAAAGCAGGAGTTTTTCGGTGGGTTACAAATATCCACGAACAAAAAAGATATTACTATACCTTTGATAATTCATTACTATTTACTGAAAGCATCCAGAAAACTACACAGATCTTACCACGCTAA", - "dna_sequence_length": 411, - "functions": [ - "Qin prophage", - "uncharacterized protein" - ], - "id": "CDS_1537", - "location": [ - [ - "NC_000913", - 1637047, - "+", - 411 - ] - ], - "md5": "e2d6205c282adff9818e325977296f8a", - "parent_gene": "", - "protein_md5": "2b96ef1d6b364d38564ed4bc37cc7894", - "protein_translation": "MDQVVIFKQIFDKVRNDLNYQWFYSELKRHNVSHYIYYLATENVHIVLKNDNTVLLKGLKNIVSVKFSKDRHLIETTSNKLKSREITFQEYRRNLAKAGVFRWVTNIHEQKRYYYTFDNSLLFTESIQKTTQILPR", - "protein_translation_length": 136, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "gnsB" - ], - [ - "gene_synonym", - "JW5253" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77695" - ], - [ - "gene_synonym", - "ASAP:ABE-0005177" - ], - [ - "gene_synonym", - "GeneID:946054" - ], - [ - "gene_synonym", - "ECK1544" - ], - [ - "gene_synonym", - "NP_416068.2" - ], - [ - "gene_synonym", - "GI:90111293" - ], - [ - "gene_synonym", - "b1550" - ], - [ - "gene_synonym", - "ydfY" - ], - [ - "gene_synonym", - "EcoGene:EG13837" - ] - ], - "dna_sequence": "ATGAATATTGAAAACTTAAAAACAAAAGCAGAAGCAGATATTTCTGAATATATAACAAAAAAAATTATTGAACTTAAGAAAAAGACCGGGAAAGAAGTTACCAGTATTCAGTTTACCGCACGGGAAAAAATGACGGGTCTTGAAAGCTATGATGTCAAGATTAATTTAATCTGA", - "dna_sequence_length": 174, - "functions": [ - "Qin prophage", - "multicopy suppressor of secG(Cs) and fabA6(Ts)" - ], - "id": "CDS_1538", - "location": [ - [ - "NC_000913", - 1637782, - "-", - 174 - ] - ], - "md5": "8707ba5cf16288a6932b6cf584c03f41", - "parent_gene": "", - "protein_md5": "f32613ff490e25e2fefaa4c8d21e0b24", - "protein_translation": "MNIENLKTKAEADISEYITKKIIELKKKTGKEVTSIQFTAREKMTGLESYDVKINLI", - "protein_translation_length": 57, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76157" - ], - [ - "gene_synonym", - "ASAP:ABE-0005180" - ], - [ - "gene_synonym", - "JW5254" - ], - [ - "gene_synonym", - "EcoGene:EG14388" - ], - [ - "gene_synonym", - "ynfN" - ], - [ - "gene_synonym", - "NP_416069.2" - ], - [ - "gene_synonym", - "GeneID:946097" - ], - [ - "gene_synonym", - "ECK1545" - ], - [ - "gene_synonym", - "b1551" - ], - [ - "gene_synonym", - "GI:90111294" - ] - ], - "dna_sequence": "ATGCGTGAATATCCAAATGGCGAAAAAACACACCTTACTGTAATGGCCGCAGGGTTTCCATCTCTGACCGGAGATCATAAAGTCATTTATGTAGCCGCGGATCGACATGTTACTTCAGAAGAAATTCTGGAAGCAGCAATAAGGCTCTTGAGTTGA", - "dna_sequence_length": 156, - "functions": [ - "Qin prophage", - "cold shock-induced protein" - ], - "id": "CDS_1539", - "location": [ - [ - "NC_000913", - 1638109, - "-", - 156 - ] - ], - "md5": "f1ce54bf2d4e891ec285c2318674d1f6", - 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"GTGAATCAGATATTCATGGTGATTTTTCTCGTGTTGTCAGGATTTATCGTCGGAAATGTCTGGAGCGACCGAGGATGGCAAAAAAAATGGGCGGAACGTGATGCTGCCGCATTATCACAAGAGGTAAATGCTCAATTTGCTGCTCGAATAATTGAACAGGGGCGAACTATAGCCCGTGATGAGGCTGTTAAAGATGCGCAACAGAAATCTGCTGAAATTTCTGCCAGGGCTGCTTATCTGTCTGATAGTGTTAACCAGTTGCGTGCCGAAGCAAAAAAATATGCCATACGCCTTGACGCAGCGAAGCATACCGCAGATCTTGCCGCTGCCGTCAGAGGCAAAACAACCAAAACCGCCGAAGGAATGCTCACCAACATGCTCGGAGATATTGCAGCAGAAGCTCAGCTTTATGCTGAAATTGCTGACGAACGCTACATCGCAGGAGTGACTTGTCAACAGATCTATGAATCTTTAAGAGATAAAAAGCATCAAATGTAG", - "dna_sequence_length": 498, - "functions": [ - "Rz-like protein, Qin prophage" - ], - "id": "CDS_1541", - "location": [ - [ - "NC_000913", - 1639527, - "-", - 498 - ] - ], - "md5": "df46a06f3b49d04a5b11020898687796", - "parent_gene": "", - "protein_md5": "5abaa9d7a30212b06e9c9fbb4aa28503", - "protein_translation": "MNQIFMVIFLVLSGFIVGNVWSDRGWQKKWAERDAAALSQEVNAQFAARIIEQGRTIARDEAVKDAQQKSAEISARAAYLSDSVNQLRAEAKKYAIRLDAAKHTADLAAAVRGKTTKTAEGMLTNMLGDIAAEAQLYAEIADERYIAGVTCQQIYESLRDKKHQM", - 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"protein_md5": "c94c4c93106c60bbcc2842366e18a800", - "protein_translation": "MRNRNLLKFLPGLLICLIVLTSCVPKQKNMPYALTQRSIPQILPLPSEAKQPKPPKECSPTCSEILQQKLSFMLKLLTNATSQE", - "protein_translation_length": 84, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76159" - ], - [ - "gene_synonym", - "NP_416072.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0005189" - ], - [ - "gene_synonym", - "JW1546" - ], - [ - "gene_synonym", - "EcoGene:EG13829" - ], - [ - "gene_synonym", - "ydfQ" - ], - [ - "gene_synonym", - "arrQ" - ], - [ - "gene_synonym", - "GI:16129513" - ], - [ - "gene_synonym", - "ECK1548" - ], - [ - "gene_synonym", - "rrrQ" - ], - [ - "gene_synonym", - "GeneID:946100" - ], - [ - "gene_synonym", - "b1554" - ] - ], - "dna_sequence": "ATGAACACAAAAATCAGATACGGCCTGTCGGCTGCCGTTCTGGCGCTGATTGGTGCTGGCGCATCTGCTCCTCAGATACTTGACCAGTTTCTGGACGAAAAAGAAGGTAACCACACAATGGCATACCGCGATGGTTCTGGCATATGGACCATCTGTCGGGGTGCCACAGTGGTGGATGGAAAAACCGTTTTTCCCAATATGAAACTGTCGAAGGAAAAATGCGACCAGGTCAACGCCATTGAGCGTGATAAGGCGCTGGCATGGGTGGAGCGCAATATTAAAGTACCACTGACCGAACCACAAAAAGCGGGTATCGCGTCATTTTGTCCCTATAACATTGGCCCCGGTAAGTGTTTCCCGTCGACGTTTTATAAGCGGCTGAATGCTGGTGATCGTAAAGGTGCATGCGAAGCGATTCGCTGGTGGATTAAGGATGGCGGACGCGATTGCCGCATTCGTTCAAATAACTGTTACGGTCAGGTTATTCGTCGTGACCAGGAGAGCGCATTAACCTGCTGGGGGATAGAACAGTGA", - "dna_sequence_length": 534, - "functions": [ - "Qin prophage", - "putative lysozyme" - ], - "id": "CDS_1543", - "location": [ - [ - "NC_000913", - 1640057, - "-", - 534 - ] - ], - "md5": "9116cf3aaef2aa677f388dc4f3c3e902", - "parent_gene": "", - "protein_md5": "46f99366dbf7ada6a1dcf09b9260284a", - "protein_translation": "MNTKIRYGLSAAVLALIGAGASAPQILDQFLDEKEGNHTMAYRDGSGIWTICRGATVVDGKTVFPNMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQKAGIASFCPYNIGPGKCFPSTFYKRLNAGDRKGACEAIRWWIKDGGRDCRIRSNNCYGQVIRRDQESALTCWGIEQ", - "protein_translation_length": 177, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005192" - ], - [ - "gene_synonym", - "NP_416073.1" - ], - [ - "gene_synonym", - "JW1547" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76160" - ], - [ - "gene_synonym", - "GI:16129514" - ], - [ - "gene_synonym", - "ydfR" - ], - [ - "gene_synonym", - "EcoGene:EG13830" - ], - [ - "gene_synonym", - "ECK1549" - ], - [ - "gene_synonym", - "GeneID:946095" - ], - [ - "gene_synonym", - "b1555" - ] - ], - "dna_sequence": "ATGACTCAAGACTATGAACTGGTTGTGAAAGGAGTCCGTAATTTTGAGAATAAAGTTACGGTAACTGTAGCCTTACAGGACAAAGAACGCTTTGACGGTGAAATTTTTGACCTGGATGTCGCCATGGACCGTGTTGAAGGAGCTGCGCTGGAGTTTTATGAGGCAGCAGCCAGAAGGAGCGTCCGGCAAGTCTTCCTGGAAGTAGCAGAAAAATTGTCAGAAAAAGTTGAGTCTTATCTGCAGCATCAGTACTCCTTTAAGATTGAAAATCCTGCCAATAAGCACGAGCGTCCTCATCATAAATATCTATGA", - "dna_sequence_length": 312, - "functions": [ - "Qin prophage", - "uncharacterized protein" - ], - "id": "CDS_1544", - "location": [ - [ - "NC_000913", - 1640365, - "-", - 312 - ] - ], - "md5": "7643c53527d94f602386b8f3db6b7dc8", - "parent_gene": "", - "protein_md5": "e341ddda255b5882a08bb1f87b4c732f", - "protein_translation": "MTQDYELVVKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEVAEKLSEKVESYLQHQYSFKIENPANKHERPHHKYL", - "protein_translation_length": 103, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "essQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0005197" - ], - [ - "gene_synonym", - "JW5255" - ], - [ - "gene_synonym", - "ECK1550" - ], - [ - "gene_synonym", - "ydfS" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77237" - ], - [ - "gene_synonym", - "EcoGene:EG13831" - ], - [ - "gene_synonym", - "NP_416074.4" - ], - [ - "gene_synonym", - "b1556" - ], - [ - "gene_synonym", - "GeneID:946093" - ], - [ - "gene_synonym", - "GI:90111295" - ] - ], - "dna_sequence": "ATGAAATCAATGGATAAGTTAACAACAGGTGTTGCCTATGGCACATCGGCGGGTAATGCTGGTTTCTGGGCATTGCAGTTACTCGATAAAGTAACTCCGTCACAGTGGGCTGCAATCGGTGTGCTGGGTAGCCTGGTTTTTGGCCTGCTGACGTATCTGACAAATCTTTATTTCAAGATTAAAGAAGACAGGCGTAAGGCTGCGAGAGGAGAGTAA", - "dna_sequence_length": 216, - "functions": [ - "Qin prophage", - "putative S lysis protein" - ], - "id": "CDS_1545", - "location": [ - [ - "NC_000913", - 1640585, - "-", - 216 - ] - ], - "md5": "b582b8ec8da8ec25c2eca0e71695e859", - "parent_gene": "", - "protein_md5": "cf2f53c118f7842a10cf2fdd5e047818", - "protein_translation": "MKSMDKLTTGVAYGTSAGNAGFWALQLLDKVTPSQWAAIGVLGSLVFGLLTYLTNLYFKIKEDRRKAARGE", - "protein_translation_length": 71, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1549" - ], - [ - "gene_synonym", - "EcoGene:EG12203" - ], - [ - "gene_synonym", - "ASAP:ABE-0005199" - ], - [ - "gene_synonym", - "GI:16129516" - ], - [ - "gene_synonym", - "NP_416075.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36995" - ], - [ - "gene_synonym", - "ECK1551" - ], - [ - "gene_synonym", - "GeneID:946091" - ], - [ - "gene_synonym", - "cspB" - ], - [ - "gene_synonym", - "b1557" - ] - ], - "dna_sequence": "ATGTCAAATAAAATGACTGGTTTAGTAAAATGGTTTAACGCTGATAAAGGTTTCGGCTTTATTTCTCCTGTTGATGGTAGTAAAGATGTGTTTGTGCATTTTTCTGCGATTCAGAATGATAATTATCGAACCTTATTTGAAGGTCAAAAGGTTACCTTCTCTATAGAGAGTGGTGCTAAAGGTCCTGCAGCAGCAAATGTCATCATTACTGATTAA", - "dna_sequence_length": 216, - "functions": [ - "Qin prophage", - "cold shock protein" - ], - "id": "CDS_1546", - "location": [ - [ - "NC_000913", - 1641554, - "-", - 216 - ] - ], - "md5": "8f287f564521afc675ee70b10e6ee6ef", - "parent_gene": "", - "protein_md5": "fde9de5f8c1d52498f9a5957a8ba432e", - "protein_translation": "MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQKVTFSIESGAKGPAAANVIITD", - "protein_translation_length": 71, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1550" - ], - [ - "gene_synonym", - "NP_416076.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A976" - ], - [ - "gene_synonym", - "b1558" - ], - [ - "gene_synonym", - "GI:16129517" - ], - [ - "gene_synonym", - "ASAP:ABE-0005205" - ], - [ - "gene_synonym", - "EcoGene:EG12205" - ], - [ - "gene_synonym", - "ECK1552" - ], - [ - "gene_synonym", - "cspF" - ], - [ - "gene_synonym", - "GeneID:946090" - ] - ], - "dna_sequence": "TTGTCCCGTAAAATGACAGGAATTGTCAAAACCTTTGACGGCAAAAGCGGCAAGGGTCTTATCACCCCATCCGATGGTCGTATCGATGTCCAGCTTCATGTTTCAGCGCTCAATCTCCGCGATGCAGAAGAAATTACCACCGGATTACGCGTGGAATTTTGCCGGATAAATGGTCTGCGTGGCCCTTCAGCTGCCAATGTTTACCTTTCATGA", - "dna_sequence_length": 213, - "functions": [ - "Qin prophage", - "cold shock protein" - ], - "id": "CDS_1547", - "location": [ - [ - "NC_000913", - 1641855, - "+", - 213 - ] - ], - "md5": "1d6d1499703ba7983ca09fff56613db3", - "parent_gene": "", - "protein_md5": "30eac0badc3f23925a993174d94fe753", - "protein_translation": "MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLRVEFCRINGLRGPSAANVYLS", - "protein_translation_length": 70, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "quuQ" - ], - [ - "gene_synonym", - "NP_416077.4" - ], - [ - "gene_synonym", - "JW1551" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76161" - ], - [ - "gene_synonym", - "ydfT" - ], - [ - "gene_synonym", - "b1559" - ], - [ - "gene_synonym", - "ECK1553" - ], - [ - "gene_synonym", - "GeneID:946103" - ], - [ - "gene_synonym", - "EcoGene:EG13832" - ], - [ - "gene_synonym", - "GI:90111296" - ], - [ - "gene_synonym", - "ASAP:ABE-0005207" - ] - ], - "dna_sequence": "ATGAACCTTGAAGCCTTACCAAAATATTACTCCCCAAAATCTCCAAAATTGAGCGATGACGCTCCAGCGACAGGCACCGGTTGTTTAACAATTACGGATGTAATGGCAGCGCAGGGGATGGTGCAGTCGAAAGCACCACTTGGGTTGGCCTTATTTCTGGCAAAAGTTGGTGTTCAGGACCCTCAGTTTGCGATTGAAGGCCTGCTAAATTACGCGATGGCACTGGATAACCCGACATTGAACAAATTGAGTGAAGAAATCCGGTTACAGATTATTCCTTACCTCGTGAGTTTTGCCTTTGCTGATTACTCCAGGTCTGCGGCAAGTAAGGCTCGCTGTGAGCATTGTTCAGGTACGGGATTTTATAATGTATTGCGCGAAGTGGTGAAACACTACAGACGCGGGGAATCTGTAATCAAGGAAGAATGGGTGAAGGAACTATGTCAGCATTGCCATGGTAAGGGCGAAGCCAGCACAGCGTGCAGAGGGTGTAAGGGTAAAGGGATTGTTCTGGATGAAAAAAGAACCCGGTTTCATGGCGTACCGGTATATAAGATTTGTGGGCGTTGTAATGGAAACCGGTTTAGTCGTTTACCGACCACGCTGGCACGACGTCATGTCCAGAAGCTGGTACCAGACCTGACCGATTATCAGTGGTATAAGGGGTATGCGGACGTCATTGGTAAACTGGTAACAAAGTGCTGGCAGGAAGAAGCATACGCGGAAGCGCAATTGAGGAAGGTGACGAGATAA", - "dna_sequence_length": 753, - "functions": [ - "Qin prophage", - "putative antitermination protein Q" - ], - "id": "CDS_1548", - "location": [ - [ - "NC_000913", - 1643241, - "-", - 753 - ] - ], - "md5": "655ba46d6073bad2bf3724ef797744ba", - "parent_gene": "", - "protein_md5": "15ae0f4008b78097fdabe6fd63c88e8e", - "protein_translation": "MNLEALPKYYSPKSPKLSDDAPATGTGCLTITDVMAAQGMVQSKAPLGLALFLAKVGVQDPQFAIEGLLNYAMALDNPTLNKLSEEIRLQIIPYLVSFAFADYSRSAASKARCEHCSGTGFYNVLREVVKHYRRGESVIKEEWVKELCQHCHGKGEASTACRGCKGKGIVLDEKRTRFHGVPVYKICGRCNGNRFSRLPTTLARRHVQKLVPDLTDYQWYKGYADVIGKLVTKCWQEEAYAEAQLRKVTR", - "protein_translation_length": 250, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5909" - ], - [ - "gene_synonym", - "NP_416078.4" - ], - [ - "gene_synonym", - "b1560" - ], - [ - "gene_synonym", - "GeneID:946108" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76162" - ], - [ - "gene_synonym", - "ydfU" - ], - [ - "gene_synonym", - "ECK1554" - ], - [ - "gene_synonym", - "GI:226524716" - ], - [ - "gene_synonym", - "ASAP:ABE-0005209" - ], - [ - "gene_synonym", - "EcoGene:EG13833" - ] - ], - "dna_sequence": "GTGCGGGTATTACTTAGACCTGTTCTGGTGCCTGAGCTTGGGCTGGTGGTCCTTAAGCCGGGCCGTGAATCCATACAGATATTTCATAATCCTCGAGTGCTGGTGGAACCGGAACCAAAAAGCATGCGTAATCTGCCATCCGGAGTCGTTCCTGCCGTTCGCCAGCCGCTGGCGGAAGACAAAACATTGCTGCCGTTTTTTAGTAACGAACGGGTGATTCGTGCTGCTGGCGGCGTTGGCGCATTGTCCGACTGGCTATTACGTCATGTTACATCCTGCCAGTGGCCTAATGGCGATTACCATCACACTGAAACAGTCATTCACCGTTATGGTACCGGCGCAATGGTGTTGTGCTGGCACTGCGACAACCAACTGCGTGACCAGACATCGGAATCACTGGAGCTGCTTGCTCAACAAAATCTGACAGCATGGGTGATTGACGTCATCCGTCACGCAATAAGCGGTACGCAGGAGCGGGAATTATCTTTGGCTGAATTATCCTGGTGGGCGGTCTGCAATCAGGTGGTGGATGCACTACCTGAGGCTGTATCGCGTCGTTCGCTGGGATTACCAGCGGAAAAAATCTGCTCGGTGTACCGCGAAAGCGACATCGTACCGGGAGAGCTGACCGCCACCAGCATATTGAAACAACGCACAAAAAATCTTGCACCGTTGCCTTACGCCCACCAGCAACAAAAATCACCACAGGAAAAGACGGTGGTAAGCATCACCGTTGATCCAGAGTCTCCGGAATCTTTCATGAAGCTGCCTAAACGTCGCCGCTGGGTTAAGGAGAAATACACACGTTGGGTTAAGACACAGCCGTGTGCTTGCTGCGGTATGCCAGCCGACGATCCGCATCATCTGATTGGTCACGGGCAGGGCGGAATGGGAACAAAAGCACATGATCTCTTTGTGTTGCCTTTGTGCAGAAAGCATCACAACGAGCTGCATACGGATACAGTGGCATTTGAAGATAAGTATGGCTCCCAACTGGAGCTGATATTTCGTTTTATCGATCGCGCGCTGGCAATTGGCGTACTGGCGTAA", 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"gene_synonym", - "dicA" - ], - [ - "gene_synonym", - "GI:16129529" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06966" - ], - [ - "gene_synonym", - "NP_416088.1" - ], - [ - "gene_synonym", - "ECK1564" - ], - [ - "gene_synonym", - "GeneID:946241" - ], - [ - "gene_synonym", - "JW1562" - ], - [ - "gene_synonym", - "ftsT" - ], - [ - "gene_synonym", - "ASAP:ABE-0005248" - ], - [ - "gene_synonym", - "EcoGene:EG10226" - ] - ], - "dna_sequence": "ATGGAAACAAAAAATTTAACTATCGGCGAACGCATCAGGTATCGTCGGAAAAACCTCAAACACACCCAAAGGTCTCTTGCTAAAGCCCTGAAAATCTCCCATGTGTCTGTATCACAATGGGAACGGGGTGATAGTGAACCTACAGGGAAGAACCTTTTTGCCCTCAGTAAAGTATTGCAATGCTCACCAACATGGATTCTATTTGGCGATGAAGACAAGCAACCAACACCACCTGTTGAGAAGCCAGTTGCCTTATCCCCCAAAGAACTAGAGCTCCTTGAGCTGTTTAATGCACTGCCAGAATCAGAACAGGATACCCAGCTCGCCGAAATGCGAGCTCGAGTAAAAAACTTCAATAAACTCTTTGAAGAATTACTAAAAGCCCGTCAGCGGACAAATAAAAGATAA", - "dna_sequence_length": 408, - "functions": [ - "Qin prophage", - "putative regulator for DicB" - ], - "id": "CDS_1559", - "location": [ 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"UniProtKB/Swiss-Prot:P21418" - ], - [ - "gene_synonym", - "GeneID:946107" - ], - [ - "gene_synonym", - "ASAP:ABE-0005255" - ] - ], - "dna_sequence": "ATGCAGAAACGAGAACCCGTCATCATCGCGCCAGACTATACCGATGATGAACTTTATGAGTGGATGCGCCAGAAAATTAATGCAGCGCAGGATCTGAAATGGGCTAATGAAGCCAGGGCTAAGCAGGCTGAAAATCTGTCCGCTCTGGAGCAGGATATCACCAATCTGGAAAAAGCAGCGGCATTAAGCATTGCCAGAATGATTACATACCCGCGTTAG", - "dna_sequence_length": 219, - "functions": [ - "uncharacterized protein, Qin prophage" - ], - "id": "CDS_1562", - "location": [ - [ - "NC_000913", - 1648823, - "+", - 219 - ] - ], - "md5": "a852638c85bc999d8f400c6f48bf81c0", - "parent_gene": "", - "protein_md5": "2f807a277675b4ff878b3a8809c704fc", - "protein_translation": "MQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAENLSALEQDITNLEKAAALSIARMITYPR", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1569" - ], - [ - "gene_synonym", - "dicB" - ], - [ - "gene_synonym", - "b1575" - ], - [ - "gene_synonym", - "NP_416092.1" 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{ - "aliases": [ - [ - "gene_synonym", - "ydfD" - ], - [ - "gene_synonym", - "b1576" - ], - [ - "gene_synonym", - "GI:16129534" - ], - [ - "gene_synonym", - "ECK1570" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P29010" - ], - [ - "gene_synonym", - "JW1567" - ], - [ - "gene_synonym", - "ASAP:ABE-0005262" - ], - [ - "gene_synonym", - "GeneID:946102" - ], - [ - "gene_synonym", - "NP_416093.1" - ], - [ - "gene_synonym", - "EcoGene:EG11303" - ] - ], - "dna_sequence": "ATGAATTCAGCATTTGTGCTTGTTCTGACAGTTTTTCTTGTTTCCGGAGAGCCAGTTGATATTGCAGTCAGTGTTCACAGGACAATGCAGGAGTGTATGACTGCAGCAACCGAACAGAAAATTCCCGGTAACTGTTACCCGGTCGATAAAGTTATTCACCAGGATAATATCGAAATCCCGGCAGGTCTTTAA", - "dna_sequence_length": 192, - "functions": [ - "Qin prophage", - "uncharacterized protein" - ], - "id": "CDS_1564", - "location": [ - [ - "NC_000913", - 1649794, - "+", - 192 - ] - ], - "md5": "8f794396aff565723a804d6d81ce0529", - "parent_gene": "", - "protein_md5": "479287795433becd333a4d1ef591c3dc", - "protein_translation": 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"ATGAGTAAAGTCTTTATTTGCGCCGCTATTCCTGACGAACTGGCAACAAGGGAAGAAGGCGCTGTGGCTGTAGCCACAGCCATTGAAGCTGGCGACGAACGCCGTGCTCGAGCAAAATTTCACTGGCAATTCCTGGAACATTATCCGGCTGCTCAGGACTGCGCTTATAAATTTATTGTCTGCGAGGATAAACCTGGCATACCCCGCCCTGCCCTCGATTCATGGGATGCTGAATATATGCAGGAAAACCGCTGGGATGAGGAGTCTGCTTCTTTTGTCCCGGTTGAGACTGAATCCGATCCGATGAACGTCACTTTTGACAAGCTGGCCCCTGAAGTACAGAACGCTGTCATGGTTAAGTTCGACACATGTGAAAACATCACCGTTGATATGGTTATTAGCGCACAGGAATTGTTGCAGGAAGACATGGCAACATTCGACGGACATATCGTTGAAGCGTTGATGAAAATGCCAGAAGTTAACGCCATGTATCCGGAGCTTAAGTTGCACGCCATTGGGTGGGTTAAGCATAAATGTATTCCTGGTGCTAAATGGCCCGAAATTCAGGCAGAGATGCGCATCTGGAAAAAACGTCGCGAAGGTGAACGCAAGGAAACCGGAAAATACACGTCTGTTGTTGATCTCGCCCGCGCCAGAGCCAATCAACAGTACACTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCC", - "dna_sequence_length": 765, - "id": "CDS_1565", - "location": [ - [ - "NC_000913", - 1650078, - "+", - 765 - ] - ], - "md5": "192d1a2ffc8e8a2848c7ca6f957e52bb", - "parent_gene": "", - "protein_md5": "164dc3bf4eece33a11eb4e1da0c245b9", - "protein_translation": "MSKVFICAAIPDELATREEGAVAVATAIEAGDERRARAKFHWQFLEHYPAAQDCAYKFIVCEDKPGIPRPALDSWDAEYMQENRWDEESASFVPVETESDPMNVTFDKLAPEVQNAVMVKFDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEVNAMYPELKLHAIGWVKHKCIPGAKWPEIQAEMRIWKKRREGERKETGKYTSVVDLARARANQQYTENSTGKISPVIAAIHREYKQTWKTLDDELA", - "protein_translation_length": 255, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF60" - ], - [ - "gene_synonym", - "b1578" - ], - [ - "gene_synonym", - "EcoGene:EG40004" - ], - [ - "gene_synonym", - "ECK0358" - ], - [ - "gene_synonym", - "insD1" - ], - [ - "gene_synonym", - "GeneID:946118" - ], - [ - "gene_synonym", - "ASAP:ABE-0005268" - ] - ], - "dna_sequence": "TGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG", - "dna_sequence_length": 693, - "id": "CDS_1566", - "location": [ - [ - "NC_000913", - 1650845, - "+", - 693 - ] - ], - "md5": "5a4245c2311fa88d5c863fafcf150b8b", - "parent_gene": "", - "protein_md5": "6f043efed90efdba3ff993ed74572fbf", - "protein_translation": "WALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI", - "protein_translation_length": 230, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13188" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76168" - ], - [ - "gene_synonym", - "ECK1573" - ], - [ - "gene_synonym", - "b1579" - ], - [ - "gene_synonym", - "ASAP:ABE-0005270" - ], - [ - "gene_synonym", - "JW1571" - ], - [ - "gene_synonym", - "intQ" - ], - [ - "gene_synonym", - "GeneID:946130" - ] - ], - "dna_sequence": "GGTGAACTACGCTCCTCTGTTTGTTACGCAATAAAAACTGGTGTTTTCGACTATGCAAAACAGTTTCCCTCCTCACGCAATCTGGAAAAATTTGGTGAGGCCCGACAAGATTTAACCATAAAAGAACTGGCTGAAAAATTTCTGGCACTGAAAGAAACTGAAGTCGCCAAAACATCACTCAACACATACCGTGCCGTCATCAAAAATATCCTGAGCATAATCGGTGAAAAAAATCTTGCCTCATCGATTAATAAAGAAAAATTACTGGAGGTTCGTAAAGAGTTACTGACTGGATACCAGATCCCCAAAAGTAACTATATTGTTACACAACCAGGGAGATCGGCTGTAACTGTAAATAATTACATGACAAATCTTAACGCCGTGTTCCAGTTTGGTGTTGATAACGGTTACCTGGCAGATAATCCGTTTAAGGGGATCTCGCCATTAAAGGAATCAAGAACCATTCCGGATCCTCTTTCGCGGGAAGAATTTATCCGTCTTATCGATGCGTGCAGAAATCAGCAAGCAAAAAATTTATGGTGTGTTTCTGTTTATACTGGAGTTCGCCCTGGTGAGCTGTGTGCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGAGAGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCATCGAAAATCATATCAGTCGAGACATACTTATGCCTGCTGGTCGCTGACAGCTGGTGCTAACCCGGCATTTATAGCAAACCAGATGGGCCATGCAGATGCGCAAATGGTATTTCAGGTATACGGAAAATGGATGTCTGAAAACAATAATGCACAGGTAGCTTTGTTAAATACACAGTTAAGCGAGTTTGCCCCAACCATGCCCCATAACGAAGCAATGAAAAATTAA", 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- "UniProtKB/Swiss-Prot:P38105" - ], - [ - "gene_synonym", - "rspB" - ], - [ - "gene_synonym", - "GeneID:946127" - ], - [ - "gene_synonym", - "EcoGene:EG12452" - ] - ], - "dna_sequence": "ATGAAAAGCATATTAATTGAAAAACCGAATCAACTGGCGATTGTCGAACGTGAAATACCCACCCCGTCAGCGGGTGAAGTACGAGTAAAAGTGAAACTTGCCGGAATTTGTGGTTCAGATAGCCATATTTATCGTGGGCATAATCCTTTTGCGAAATATCCGCGCGTCATTGGTCATGAATTCTTTGGCGTCATTGATGCAGTGGGTGAAGGCGTGGAAAGCGCCAGAGTCGGTGAACGTGTTGCTGTCGATCCGGTGGTCAGCTGTGGGCATTGCTATCCGTGCTCTATAGGTAAACCGAACGTTTGTACGACACTGGCTGTATTAGGTGTGCACGCTGACGGTGGTTTCAGTGAATATGCCGTGGTTCCGGCAAAAAATGCGTGGAAAATTCCTGAAGCAGTGGCCGATCAATATGCGGTAATGATCGAACCTTTTACCATTGCGGCTAACGTAACCGGACATGGTCAACCGACTGAAAATGATACCGTTCTGGTTTATGGTGCCGGTCCAATCGGCCTGACGATCGTTCAGGTATTAAAAGGCGTCTATAACGTTAAAAATGTGATTGTTGCCGATCGCATTGATGAACGACTGGAAAAAGCGAAAGAGAGCGGGGCTGACTGGGCGATTAATAACAGCCAGACACCGCTTGGCGAGATTTTCACTGAAAAAGGCATCAAGCCGACATTAATTATCGATGCGGCTTGTCATCCTTCTATCCTGAAAGAGGCCGTAACGCTGGCTTCTCCAGCGGCACGTATTGTATTGATGGGGTTCTCCAGTGAACCGTCTGAAGTGATTCAGCAAGGAATTACCGGAAAAGAACTCTCTATTTTCTCTTCACGCTTAAATGCAAATAAATTCCCGATCGTTATCGACTGGTTAAGTAAAGGGTTAATTAAACCAGAAAAATTAATTACCCATACGTTTGATTTCCAGCATGTTGCTGATGCCATTAGTTTATTTGAACAGGATCAAAAACATTGCTGCAAAGTCTTACTCACTTTTTCTGAATAA", 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"ASAP:ABE-0005275" - ], - [ - "gene_synonym", - "JW1573" - ], - [ - "gene_synonym", - "rspA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38104" - ], - [ - "gene_synonym", - "EcoGene:EG12451" - ] - ], - "dna_sequence": "ATGAAGATCGTAAAGGCTGAAGTTTTTGTTACCTGTCCGGGGCGTAATTTCGTCACATTAAAAATCACCACTGAGGACGGTATTACGGGCCTTGGGGATGCCACCCTCAATGGACGTGAGCTTTCCGTGGCCTCTTATTTGCAGGATCACCTTTGTCCGCAGCTTATTGGTCGCGATGCGCACCGTATCGAAGATATCTGGCAGTTTTTCTATAAAGGTGCTTACTGGCGTCGCGGTCCGGTTACGATGTCGGCCATTTCAGCGGTTGATATGGCGCTGTGGGATATTAAAGCCAAAGCTGCCAACATGCCGCTTTACCAGTTACTCGGCGGCGCGTCTCGTGAAGGGGTGATGGTTTATTGCCATACCACCGGTCACAGTATTGATGAAGCTCTGGATGATTATGCCCGTCATCAAGAGCTTGGATTCAAAGCCATCCGCGTGCAGTGCGGAATCCCTGGTATGAAAACCACCTACGGCATGTCGAAAGGTAAAGGTCTGGCTTATGAACCCGCAACCAAAGGACAGTGGCCGGAAGAGCAGCTGTGGTCGACGGAGAAATACCTCGATTTCATGCCGAAATTGTTTGACGCGGTACGTAACAAGTTTGGTTTTAATGAACATTTGCTGCATGACATGCACCATCGCTTAACGCCTATTGAAGCGGCGCGCTTTGGTAAAAGCATTGAAGATTATCGCATGTTCTGGATGGAAGACCCGACGCCTGCGGAAAACCAGGAATGCTTCCGTCTCATTCGCCAACATACCGTCACACCCATCGCAGTGGGTGAAGTCTTCAACAGCATCTGGGACTGCAAACAACTGATTGAAGAGCAACTCATCGATTATATCCGCACCACGCTGACCCATGCAGGCGGAATTACCGGTATGCGCCGGATTGCCGATTTTGCTTCGCTGTATCAGGTACGTACTGGCTCACACGGTCCTTCCGATTTGTCACCAGTCTGCATGGCTGCGGCGCTGCACTTTGATCTGTGGGTCCCCAATTTCGGTGTCCAGGAATACATGGGTTATTCCGAACAAATGCTCGAAGTCTTCCCGCACAACTGGACTTTCGATAACGGCTATATGCATCCGGGAGACAAACCGGGTCTTGGTATCGAATTCGATGAAAAGCTGGCGGCGAAATATCCCTATGAACCTGCTTATCTACCAGTCGCACGTCTGGAAGATGGCACGCTGTGGAACTGGTAA", 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], - [ - "gene_synonym", - "JW1574" - ], - [ - "gene_synonym", - "EcoGene:EG13839" - ], - [ - "gene_synonym", - "GeneID:946125" - ], - [ - "gene_synonym", - "GI:16129540" - ], - [ - "gene_synonym", - "ASAP:ABE-0005279" - ], - [ - "gene_synonym", - "ynfA" - ] - ], - "dna_sequence": "ATGATTAAAACAACGTTACTATTTTTTGCTACTGCGCTGTGTGAAATTATTGGATGCTTTCTGCCCTGGTTGTGGTTAAAACGAAACGCCAGTATCTGGCTGTTGCTTCCGGCGGGGATTTCACTGGCGCTGTTTGTCTGGTTGTTAACGTTGCATCCAGCGGCGAGTGGGCGTGTTTACGCGGCTTATGGTGGCGTTTATGTCTGCACGGCGTTGATGTGGCTGCGCGTTGTGGATGGCGTGAAACTGACTCTTTATGACTGGACGGGTGCGTTGATTGCGCTTTGCGGCATGTTGATCATTGTTGCGGGCTGGGGGCGCACGTAG", - "dna_sequence_length": 327, - "functions": [ - "UPF0060 family inner membrane protein" - ], - "id": "CDS_1570", - "location": [ - [ - "NC_000913", - 1655673, - "-", - 327 - ] - ], - "md5": "dbc054b7b8b67a188764801f629f1ae9", - "parent_gene": "", - "protein_md5": "54660bbf25f0bf133109f2ee28f1c11c", - "protein_translation": "MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDGVKLTLYDWTGALIALCGMLIIVAGWGRT", - "protein_translation_length": 108, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13840" - ], - [ - "gene_synonym", - "ECK1578" - ], - [ - "gene_synonym", - "GeneID:946119" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76170" - ], - [ - "gene_synonym", - "b1583" - ], - [ - "gene_synonym", - "ASAP:ABE-0005284" - ], - [ - "gene_synonym", - "JW1575" - ], - [ - "gene_synonym", - "GI:16129541" - ], - [ - "gene_synonym", - "NP_416100.1" - ], - [ - "gene_synonym", - "ynfB" - ] - ], - "dna_sequence": "ATGAAAATCACTCTCAGCAAACGAATCGGCCTGCTCGCTATTCTGCTGCCTTGCGCACTGGCATTGAGCACAACTGTTCATGCCGAAACTAACAAACTGGTGATTGAGTCTGGCGACAGTGCACAAAGCCGCCAGCACGCCGCTATGGAAAAAGAGCAATGGAATGACACGCGCAATCTGCGCCAGAAAGTGAATAAACGCACTGAAAAAGAGTGGGATAAAGCCGACGCCGCTTTTGATAACCGCGATAAATGTGAGCAAAGCGCCAACATCAATGCCTACTGGGAGCCCAATACTTTGCGCTGCCTGGACCGTCGAACTGGCCGCGTTATTACCCCCTAA", - "dna_sequence_length": 342, - "functions": [ - "UPF0482 family putative periplasmic protein" - ], - "id": "CDS_1571", - "location": [ - [ - "NC_000913", - 1655808, - "+", - 342 - ] - ], - "md5": "ced1926b3f83023c6e5865ec3dc5b8e4", - "parent_gene": "", - "protein_md5": "0cf2ea0c11bdcb07e43c5ce7edef3229", - "protein_translation": "MKITLSKRIGLLAILLPCALALSTTVHAETNKLVIESGDSAQSRQHAAMEKEQWNDTRNLRQKVNKRTEKEWDKADAAFDNRDKCEQSANINAYWEPNTLRCLDRRTGRVITP", - "protein_translation_length": 113, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1579" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A951" - ], - [ - "gene_synonym", - "b1584" - ], - [ - "gene_synonym", - "JW1576" - ], - [ - "gene_synonym", - "GeneID:946117" - ], - [ - "gene_synonym", - "GI:16129542" - ], - [ - "gene_synonym", - "speG" - ], - [ - "gene_synonym", - "EcoGene:EG12447" - ], - [ - "gene_synonym", - "NP_416101.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0005286" - ] - ], - "dna_sequence": "ATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGCTGGTGGAAATTAACCATGTTCATCGCCGCGCAGAATTTCAGATAATTATCTCCCCGGAGTATCAGGGGAAAGGTCTGGCAACCCGTGCCGCCAAATTAGCAATGGACTATGGCTTTACCGTTCTCAATCTCTATAAGCTGTATCTGATCGTTGATAAAGAGAATGAAAAAGCGATTCACATTTACCGCAAGCTTGGCTTTTCGGTTGAAGGTGAATTGATGCACGAGTTCTTTATTAATGGTCAATATCGTAATGCCATTCGCATGTGTATATTCCAGCATCAGTATCTGGCAGAGCACAAAACACCGGGTCAGACTCTCCTGAAGCCGACCGCACAATAG", - "dna_sequence_length": 561, - "functions": [ - "spermidine N(1)-acetyltransferase" - ], - "id": "CDS_1572", - "location": [ - [ - "NC_000913", - 1656184, - "+", - 561 - ] - ], - "md5": "ef00e50ac0f8cfc3e41ef6b6d1b254d6", - "parent_gene": "", - "protein_md5": "a14f98a81c0b073879310c83ed38d3e4", - "protein_translation": "MPSAHSVKLRPLEREDLRYVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEINHVHRRAEFQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFSVEGELMHEFFINGQYRNAIRMCIFQHQYLAEHKTPGQTLLKPTAQ", - "protein_translation_length": 186, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13841" - ], - [ - "gene_synonym", - "ECK1580" - ], - [ - "gene_synonym", - "b1585" - ], - [ - "gene_synonym", - "JW5258" - ], - [ - "gene_synonym", - "NP_416102.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0005288" - ], - [ - "gene_synonym", - "GI:90111299" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67553" - ], - [ - "gene_synonym", - "ynfC" - ], - [ - "gene_synonym", - "GeneID:946131" - ] - ], - "dna_sequence": "GTGAAATACAAATTACTACCATGCTTACTCGCGATATTCCTCACAGGATGTGACCGCACAGAGGTAACACTTTCATTTACCCCTGAGATGGCCAGTTTCTCTAATGAATTCGATTTTGATCCGCTGCGTGGTCCGGTAAAAGATTTCACTCAGACATTAATGGATGAGCAAGGTGAAGTGACGAAACGTGTTTCTGGGACTTTGTCGGAAGAAGGCTGTTTTGATTCACTCGAATTACTGGATCTGGAAAATAATACCGTGGTCGCTCTGGTACTGGACGCCAATTATTACCGTGATGCCGAGACGCTGGAGAAGAGAGTACGTTTACAGGGAAAATGCCAGCTAGCAGAATTACCTTCTGCCGGGGTGAGTTGGGAAACCGATGATAATGGCTTCGTGATTAAAGCCAGCAGCAAACAAATGCAGATGGAATATCGCTATGATGATCAGGGTTATCCGCTGGGTAAAACCACGAAAAGTAACGACAAAACATTATCTGTCAGCGCCACGCCATCAACGGATCCGATCAAAAAATTAGATTACACAGCGGTTACTTTACTGAATAATCAACGGGTTGGTAATGTAAAACAGAGCTGTGAATATGACAGTCACGCTAATCCGGTGGACTGTCAGCTAATCATTGTTGATGAAGGAGTAAAACCCGCCGTCGAACGGGTTTACACCATCAAAAATACGATCGATTATTATTAA", - "dna_sequence_length": 711, - "functions": [ - "UPF0257 family lipoprotein" - ], - "id": "CDS_1573", - "location": [ - [ - "NC_000913", - 1657457, - "-", - 711 - ] - ], - "md5": "e6c588ee59a4260cea3882383023233a", - "parent_gene": "", - "protein_md5": "9333e9f1da247cee7d3329e1bb40a843", - "protein_translation": "MKYKLLPCLLAIFLTGCDRTEVTLSFTPEMASFSNEFDFDPLRGPVKDFTQTLMDEQGEVTKRVSGTLSEEGCFDSLELLDLENNTVVALVLDANYYRDAETLEKRVRLQGKCQLAELPSAGVSWETDDNGFVIKASSKQMQMEYRYDDQGYPLGKTTKSNDKTLSVSATPSTDPIKKLDYTAVTLLNNQRVGNVKQSCEYDSHANPVDCQLIIVDEGVKPAVERVYTIKNTIDYY", - "protein_translation_length": 236, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13842" - ], - [ - "gene_synonym", - "ECK1581" - ], - [ - "gene_synonym", - "JW5259" - ], - [ - "gene_synonym", - "b1586" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76172" - ], - [ - "gene_synonym", - "NP_416103.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0005297" - ], - [ - "gene_synonym", - "GI:90111300" - ], - [ - "gene_synonym", - "ynfD" - ], - [ - "gene_synonym", - "GeneID:946133" - ] - ], - "dna_sequence": "ATGAAACTCTCAACCTGCTGTGCCGCGCTTCTGCTCGCCCTCGCCTCACCCGCGGTACTCGCCGCGCCGGGATCCTGTGAGCGCATACAGAGCGATATATCACAGCGCATTATCAATAATGGCGTACCCGAAAGCAGCTTCACGTTAAGTATTGTACCCAATGACCAGGTTGATCAGCCTGATTCCCAGGTCGTCGGCCATTGCGCTAATGATACGCATAAAATTCTCTATACCCGCACCACCAGCGGTAACGTCTCTGCTCCCGCGCAGTCTAGCCAGGATGGCGCGCCTGCCGAACCGCAGTAA", - "dna_sequence_length": 306, - "functions": [ - "DUF1161 family periplasmic protein" - ], - "id": "CDS_1574", - "location": [ - [ - "NC_000913", - 1657565, - "+", - 306 - ] - ], - "md5": "405c5639315c9c409114a4b9face3d9c", - "parent_gene": "", - "protein_md5": "aac39d8f849e8d030cb4c1dc3a9352dc", - "protein_translation": "MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPESSFTLSIVPNDQVDQPDSQVVGHCANDTHKILYTRTTSGNVSAPAQSSQDGAPAEPQ", - "protein_translation_length": 101, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13843" - ], - [ - "gene_synonym", - "ECK1582" - ], - [ - "gene_synonym", - "b1587" - ], - [ - "gene_synonym", - "ASAP:ABE-0005302" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77374" - ], - [ - "gene_synonym", - "ynfE" - ], - [ - "gene_synonym", - "GeneID:946135" - ], - [ - "gene_synonym", - "JW1579" - ], - [ - "gene_synonym", - "GI:16129545" - ], - [ - "gene_synonym", - "NP_416104.1" - ] - ], - "dna_sequence": "ATGTCCAAAAATGAACGAATGGTGGGCATCAGCCGCAGAACACTCGTTAAATCTACCGCGATAGGTTCTCTGGCGCTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGTGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATCCGCCGGCGTATTAATCATCCCGATCGCTTGAATTACCCAATGAAACGCGTGGGCAAACGCGGCGAAGGCAAATTCGAACGGATTAGCTGGGATGAAGCCCTGGATACTATCGCCAGTAGCCTGAAGAAAACCGTCGAACAATATGGCAATGAGGCTGTATATATTCAGTACTCTTCGGGGATCGTTGGCGGCAATATGACCCGCTCTTCGCCATCAGCCTCGGCGGTCAAACGCCTGATGAACTGCTACGGCGGTTCACTCAACCAGTATGGCTCCTACAGCACTGCGCAAATTTCCTGTGCCATGCCCTACACCTACGGCAGTAATGATGGCAACAGCACCACGGATATTGAAAACAGCAAGCTGGTCGTGATGTTTGGTAACAACCCGGCAGAAACCCGCATGAGCGGTGGTGGCATCACTTATCTTCTTGAAAAAGCGCGCGAGAAATCGAACGCCAAAATGATTGTTATCGATCCGCGATATACCGATACGGCTGCCGGTCGTGAAGACGAATGGCTCCCTATTCGCCCGGGCACCGATGCCGCGCTGGTTGCGGGTATTGCCTGGGTATTGATTAACGAAAATCTCGTTGATCAACCTTTTCTCGATAAATACTGCGTCGGCTATGACGAAAAAACCTTACCCGCAGATGCACCCAAAAATGGTCACTATAAAGCCTATATTCTTGGTGAAGGTGACGATAAAACAGCGAAAACGCCGCAGTGGGCTTCGCAAATTACCGGTATCCCGGAGGACCGTATCATCAAACTGGCGCGTGAAATTGGCACAGCAAAACCCGCTTATATCTGCCAGGGCTGGGGGCCACAACGCCAGGCAAACGGCGAACTGACTGCACGCGCTATTGCTATGTTACCTATTTTGACGGGCAATGTCGGCATCAGCGGCGGAAATAGTGGCGCGCGTGAATCGACCTATACCATTACCATAGAACGCCTGCCGGTGCTGGATAATCCGGTCAAAACGTCAATCTCCTGCTTCAGCTGGACAGATGCTATCGATCATGGTCCGCAAATGACGGCAATCCGCGACGGCGTCCGCGGCAAAGATAAACTGGATGTGCCCATTAAGTTCATCTGGAACTACGCGGGAAATACCCTCGTTAATCAGCATTCTGACATCAACAAAACGCATGAAATTCTGCAGGACGAATCGAAATGCGAAATGATTGTGGTCATCGAAAACTTTATGACCTCATCGGCAAAATATGCCGACATTCTGCTGCCAGACCTGATGACCGTTGAGCAGGAAGATATTATTCCTAACGACTACGCCGGTAACATGGGATATCTCATTTTCCTCCAGCCTGTCACCAGCGAAAAATTCGAACGCAAACCGATTTACTGGATCCTGAGTGAAGTCGCGAAACGTCTTGGACCTGACGTCTATCAAAAGTTCACAGAAGGTCGCACGCAGGAACAATGGTTACAACATCTGTACGCCAAAATGCTTGCCAAAGATCCGGCGTTACCGTCTTACGACGAACTGAAAAAAATGGGTATCTATAAGCGTAAAGATCCCAATGGCCATTTTGTCGCCTACAAAGCATTTCGTGACGACCCCGAGGCAAATCCACTTAAAACGCCTTCCGGTAAGATTGAAATTTATTCCAGCAGGCTGGCGGAAATTGCCCGTACCTGGGAACTGGAAAAAGATGAAGTGATAAGCCCATTGCCAGTTTATGCCTCAACCTTTGAAGGCTGGAACTCCCCTGAACGTAGAACCTTCCCACTGCAACTGTTTGGTTTCCATTACAAATCCCGTACTCACTCGACCTACGGCAATATTGATCTCCTGAAGGCTGCCTGCCGTCAGGAGGTGTGGATCAACCCTATAGATGCGCAGAAACGTGGGATTGCCAACGGCGATATGGTGCGGGTGTTTAACCATCGTGGCGAAGTTCGGCTACCAGCCAAAGTAACACCACGTATTCTCCCTGGAGTTAGCGCTATGGGCCAGGGAGCCTGGCACGAGGCCAATATGTCTGGCGATAAAATCGACCATGGCGGCTGTGTGAATACGCTAACCACTCTGCGCCCTTCACCACTGGCGAAGGGAAACCCGCAGCACACTAATCTGGTCGAGATCGAAAAAATATAA", 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"MSKNERMVGISRRTLVKSTAIGSLALAAGGFSLPFTLRNAAAAVQQAREKVVWGACSVNCGSRCALRLHVKDNEVTWVETDNTGSDEYGNHQVRACLRGRSIRRRINHPDRLNYPMKRVGKRGEGKFERISWDEALDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKRLMNCYGGSLNQYGSYSTAQISCAMPYTYGSNDGNSTTDIENSKLVVMFGNNPAETRMSGGGITYLLEKAREKSNAKMIVIDPRYTDTAAGREDEWLPIRPGTDAALVAGIAWVLINENLVDQPFLDKYCVGYDEKTLPADAPKNGHYKAYILGEGDDKTAKTPQWASQITGIPEDRIIKLAREIGTAKPAYICQGWGPQRQANGELTARAIAMLPILTGNVGISGGNSGARESTYTITIERLPVLDNPVKTSISCFSWTDAIDHGPQMTAIRDGVRGKDKLDVPIKFIWNYAGNTLVNQHSDINKTHEILQDESKCEMIVVIENFMTSSAKYADILLPDLMTVEQEDIIPNDYAGNMGYLIFLQPVTSEKFERKPIYWILSEVAKRLGPDVYQKFTEGRTQEQWLQHLYAKMLAKDPALPSYDELKKMGIYKRKDPNGHFVAYKAFRDDPEANPLKTPSGKIEIYSSRLAEIARTWELEKDEVISPLPVYASTFEGWNSPERRTFPLQLFGFHYKSRTHSTYGNIDLLKAACRQEVWINPIDAQKRGIANGDMVRVFNHRGEVRLPAKVTPRILPGVSAMGQGAWHEANMSGDKIDHGGCVNTLTTLRPSPLAKGNPQHTNLVEIEKI", - "protein_translation_length": 808, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1588" - ], - [ - "gene_synonym", - "GI:171701681" - ], - [ - "gene_synonym", - "EcoGene:EG13844" - ], - [ - "gene_synonym", - "JW5260" - ], - [ - "gene_synonym", - "ASAP:ABE-0005307" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77783" - ], - [ - "gene_synonym", - "NP_416105.4" - ], - [ - "gene_synonym", - "ynfF" - ], - [ - "gene_synonym", - "GeneID:945268" - ], - [ - "gene_synonym", - "ECK1583" - ] - ], - "dna_sequence": "ATGAAAATCCATACCACAGAGGCGCTCATGAAGGCTGAAATCAGCCGTAGAAGTCTGATGAAAACCTCCGCACTTGGCAGTCTTGCGCTGGCAAGCAGTGCTTTCACTCTGCCATTTTCCCAAATGGTCCGGGCGGCAGAGGCTCCGGTAGAAGAGAAAGCGGTCTGGAGTTCCTGCACCGTTAACTGCGGGAGCCGCTGTCTGTTACGTTTGCATGTGAAAGATGACACCGTGTACTGGGTGGAGTCTGATACGACAGGTGACGACGTCTACGGTAATCATCAGGTTCGAGCGTGTTTACGCGGGCGCTCTATCCGCCGACGGATGAATCATCCTGATAGGTTGAAATATCCCATGAAGCGCGTCGGCAAGCGCGGTGAAGGTAAATTTGAACGGATAAGTTGGGACGAAGCCCTGGATACCATCAGTGATAATCTTCGGCGGATCCTGAAAGATTACGGCAATGAGGCTGTACATGTCCTGTACGGAACAGGCGTAGATGGCGGAAACATCACCAACTCAAACGTCCCGTACCGTCTGATGAACTCTTGCGGTGGTTTTCTCAGTCGCTATGGCAGCTACAGTACCGCACAGATCAGTGCCGCAATGAGTTATATGTTCGGTGCCAATGATGGCAACAGCCCGGATGATATCGCCAATACGAAACTGGTCGTTATGTTCGGAAATAACCCGGCAGAAACGCGGATGAGCGGCGGTGGTGTCACTTACTACGTCGAGCAAGCCCGCGAACGTTCAAACGCACGCATGATCGTCATCGATCCACGTTATAACGACACTGCTGCCGGGCGTGAAGATGAATGGCTGCCCATTCGCCCTGGCACCGATGGCGCACTGGCCTGTGCGATTGCCTGGGTACTGATTACTGAAAACATGGTCGATCAGCCATTTCTCGACAAATATTGTGTTGGTTACGATGAAAAAACGCTGCCCGCCAACGCACCACGTAACGCGCATTATAAAGCCTATATTCTGGGCGAAGGGCCTGACGGCATAGCTAAAACGCCGGAATGGGCAGCAAAAATCACCAGCATCCCGGCAGAAAAAATTATCCAGTTGGCACGAGAGATCGGTTCAGCAAAACCTGCTTATATTTGTCAGGGTTGGGGGCCACAACGACATTCCAACGGCGAGCAAACATCCCGCGCTATTGCCATGCTTTCCGTTCTCACCGGCAACGTCGGCATAAACGGCGGCAACTCAGGCGTACGCGAAGGTAGCTGGGATCTGGGGGTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGTGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAGGATGACAGCAAGTGCGAGATGATTGTTGGCATTGACCACTTCATGACGGCCTCGGCTAAGTATTGCGATATCCTGTTGCCCGACCTGATGCCAACAGAGCAAGAAGACCTTATCTCTCATGAATCTGCAGGGAATATGGGCTATGTGATCCTCGCCCAACCCGCAACCTCAGCAAAATTTGAACGCAAACCCATCTACTGGATGCTGAGTGAAGTCGCCAAACGCTTAGGACCAGACGTTTATCAAACCTTTACTGAAGGTCGCAGTCAGCATGAATGGATCAAATATCTCCATGCGAAAACGAAGGAACGTAACCCTGAGATGCCCGACTACGAGGAGATGAAAACGACCGGGATCTTTAAGAAAAAATGCCCGGAAGAACACTACGTCGCTTTCCGCGCATTCCGTGAAGATCCACAGGCAAACCCGTTGAAAACACCTTCGGGGAAAATCGAAATTTATTCTGAACGACTGGCGAAGATTGCAGATACCTGGGAATTGAAAAAAGATGAAATTATTCATCCCCTTCCTGCGTATACCCCAGGTTTTGATGGCTGGGACGATCCCCTGCGGAAAACCTATCCACTGCAGTTAACGGGCTTCCATTACAAAGCGCGTACCCACTCCAGCTACGGCAATATTGATGTGTTACAGCAGGCCTGCCCACAAGAGGTGTGGATCAACCCCATTGATGCTCAGGCACGCGGTATCCGTCATGGCGATACCGTGCGGGTATTTAACAATAATGGAGAAATGCTGATTGCCGCAAAAGTGACTCCGCGTATTCTGCCTGGCGTTACCGCCATCGGGCAAGGTGCGTGGCTTAAAGCGGATATGTTTGGTGACCGGGTCGATCACGGCGGCAGTATCAATATTCTGACCTCTCACCGCCCTTCACCGCTGGCAAAGGGAAACCCGTCGCACAGCAATCTTGTCCAGATCGAAAAGGTTTAA", 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"MKIHTTEALMKAEISRRSLMKTSALGSLALASSAFTLPFSQMVRAAEAPVEEKAVWSSCTVNCGSRCLLRLHVKDDTVYWVESDTTGDDVYGNHQVRACLRGRSIRRRMNHPDRLKYPMKRVGKRGEGKFERISWDEALDTISDNLRRILKDYGNEAVHVLYGTGVDGGNITNSNVPYRLMNSCGGFLSRYGSYSTAQISAAMSYMFGANDGNSPDDIANTKLVVMFGNNPAETRMSGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLPIRPGTDGALACAIAWVLITENMVDQPFLDKYCVGYDEKTLPANAPRNAHYKAYILGEGPDGIAKTPEWAAKITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTSRAIAMLSVLTGNVGINGGNSGVREGSWDLGVEWFPMLENPVKTQISVFTWTDAIDHGTEMTATRDGVRGKEKLDVPIKFLWCYASNTLINQHGDINHTHEVLQDDSKCEMIVGIDHFMTASAKYCDILLPDLMPTEQEDLISHESAGNMGYVILAQPATSAKFERKPIYWMLSEVAKRLGPDVYQTFTEGRSQHEWIKYLHAKTKERNPEMPDYEEMKTTGIFKKKCPEEHYVAFRAFREDPQANPLKTPSGKIEIYSERLAKIADTWELKKDEIIHPLPAYTPGFDGWDDPLRKTYPLQLTGFHYKARTHSSYGNIDVLQQACPQEVWINPIDAQARGIRHGDTVRVFNNNGEMLIAAKVTPRILPGVTAIGQGAWLKADMFGDRVDHGGSINILTSHRPSPLAKGNPSHSNLVQIEKV", - "protein_translation_length": 807, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005309" - ], - [ - "gene_synonym", - "ECK1584" - ], - [ - "gene_synonym", - "b1589" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAJ1" - ], - [ - "gene_synonym", - "GI:16129547" - ], - [ - "gene_synonym", - "NP_416106.1" - ], - [ - "gene_synonym", - "GeneID:945638" - ], - [ - "gene_synonym", - "ynfG" - ], - [ - "gene_synonym", - "EcoGene:EG13845" - ], - [ - "gene_synonym", - "JW1581" - ] - ], - "dna_sequence": "ATGACCACACAATATGGATTTTTTATCGATTCCAGCCGCTGTACTGGCTGTAAAACCTGCGAACTGGCGTGCAAAGATTTTAAAGATCTTGGCCCGGAAGTCAGTTTCCGCCGTATTTATGAATACGCTGGCGGCGACTGGCAGGAAGATAATGGCGTCTGGCACCAGAACGTGTTCGCTTATTATCTCTCCATCTCCTGTAACCATTGCGATGACCCCGCATGTACAAAAGTCTGCCCCAGCGGCGCAATGCATAAGCGTGAAGATGGCTTTGTGGTGGTTGATGAAGATGTTTGTATCGGCTGCCGCTACTGCCACATGGCTTGTCCGTACGGCGCGCCACAGTACAATGCTGAAAAAGGGCACATGACGAAGTGCGATGGTTGTTATTCGCGCGTCGCCGAGGGGAAACAACCCATATGTGTCGAATCCTGCCCGCTGCGTGCACTTGAGTTCGGTCCAATTGAAGAGCTGCGCCAGAAGCACGGCACTCTTGCTGCCGTCGCGCCACTGCCGCGCGCGCATTTCACAAAACCCAATATCGTTATCAAACCTAACGCCAACAGCCGCCCGACCGGCGATACCACTGGTTATCTGGCTAATCCGGAGGAAGTGTAA", - "dna_sequence_length": 618, - "functions": [ - "oxidoreductase, Fe-S subunit" - ], - "id": "CDS_1577", - "location": [ - [ - "NC_000913", - 1662990, - "+", - 618 - ] - ], - "md5": "c0f0afb1de5a6c0b8fb302e612a1ec40", - "parent_gene": "", - "protein_md5": "1012a7f951bc4856368ad18a8de3478a", - "protein_translation": "MTTQYGFFIDSSRCTGCKTCELACKDFKDLGPEVSFRRIYEYAGGDWQEDNGVWHQNVFAYYLSISCNHCDDPACTKVCPSGAMHKREDGFVVVDEDVCIGCRYCHMACPYGAPQYNAEKGHMTKCDGCYSRVAEGKQPICVESCPLRALEFGPIEELRQKHGTLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPEEV", - "protein_translation_length": 205, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416107.1" - ], - [ - "gene_synonym", - "ECK1585" - ], - [ - "gene_synonym", - "EcoGene:EG13846" - ], - [ - "gene_synonym", - "ASAP:ABE-0005311" - ], - [ - "gene_synonym", - "JW5261" - ], - [ - "gene_synonym", - "b1590" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76173" - ], - [ - "gene_synonym", - "GI:16129548" - ], - [ - "gene_synonym", - "ynfH" - ], - [ - "gene_synonym", - "GeneID:945822" - ] - ], - "dna_sequence": "ATGGGAAATGGATGGCATGAGTGGCCACTGGTTATCTTTACCGTATTGGGTCAATGCGTAGTAGGCGCGCTGATTGTTAGCGGAATTGGCTGGTTCGCCGCCAAAAATGACGCAGACCGTCAGCGTATTGTCCGTGGCATGTTTTTCCTCTGGCTGTTGATGGGCGTCGGGTTTATTGCCTCTGTCATGCACCTGGGATCGCCACTGCGGGCGTTTAACTCCCTGAATCGAATCGGAGCTTCTGGTCTGAGTAACGAGATTGCTGCCGGTTCCATATTTTTTGCCGTTGGCGGATTATGGTGGCTGGTGGCAGTCATCGGTAAAATGCCGCAAGCGTTGGGGAAACTCTGGTTACTTTTCAGCATGGCGCTCGGCGTCATTTTCGTCTGGATGATGACCTGCGTGTATCAAATCGACACCGTGCCAACCTGGCATAACGGTTACACTACGCTGGCTTTCTTCCTGACGGTATTGTTGAGCGGTCCAATACTTGCTGCCGCAATTCTGCGGGCAGCTCGCGTTACATTTAATACCACACCATTTGCCATCATTAGCGTTCTGGCGCTGATCGCTTGTGCCGGGGTGATTGTGCTGCAAGGTTTGTCTCTGGCGTCTATTCACTCATCCGTGCAACAAGCCAGCGCACTGGTACCAGATTACGCCTCCTTACAGGTCTGGCGTGTGGTATTGTTATGCGCAGGTCTTGGATGCTGGCTTTGCCCGCTCATTCGTCGCCGTGAACCTCACGTTGCCGGACTTATTCTGGGGCTAATCCTCATACTTGGCGGTGAGATGATCGGGCGTGTGCTCTTTTATGGCCTGCACATGACAGTAGGAATGGCTATTGCAGGTTAA", - "dna_sequence_length": 855, - "functions": [ - "oxidoreductase, membrane subunit" - ], - "id": "CDS_1578", - "location": [ - [ - "NC_000913", - 1663609, - "+", - 855 - ] - ], - "md5": "781859579a625e352a6456d2baf9d8d6", - "parent_gene": "", - "protein_md5": "6a4f85ec825b46f3ad6fe6e5135ea3db", - "protein_translation": "MGNGWHEWPLVIFTVLGQCVVGALIVSGIGWFAAKNDADRQRIVRGMFFLWLLMGVGFIASVMHLGSPLRAFNSLNRIGASGLSNEIAAGSIFFAVGGLWWLVAVIGKMPQALGKLWLLFSMALGVIFVWMMTCVYQIDTVPTWHNGYTTLAFFLTVLLSGPILAAAILRAARVTFNTTPFAIISVLALIACAGVIVLQGLSLASIHSSVQQASALVPDYASLQVWRVVLLCAGLGCWLCPLIRRREPHVAGLILGLILILGGEMIGRVLFYGLHMTVGMAIAG", - "protein_translation_length": 284, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1586" - ], - [ - "gene_synonym", - "NP_416108.2" - ], - [ - "gene_synonym", - "GI:90111302" - ], - [ - "gene_synonym", - "EcoGene:EG13847" - ], - [ - "gene_synonym", - "GeneID:945987" - ], - [ - "gene_synonym", - "JW5262" - ], - [ - "gene_synonym", - "b1591" - ], - [ - "gene_synonym", - "dmsD" - ], - [ - "gene_synonym", - "ynfI" - ], - [ - "gene_synonym", - "ASAP:ABE-0005314" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69853" - ] - ], - "dna_sequence": "ATGACCCATTTTTCACAGCAAGATAATTTTTCTGTCGCGGCGCGCGTGTTGGGCGCGCTGTTTTATTACGCTCCAGAGAGTGCGGAAGCCGCACCTCTGGTTGCGGTACTCACCAGTGACGGCTGGGAAACTCAGTGGCCTCTACCAGAAGCGTCATTAGCGCCGCTGGTGACGGCTTTTCAGACACAGTGTGAAGAGACTCACGCCCAGGCCTGGCAGCGTTTGTTTGTCGGCCCGTGGGCACTGCCGTCTCCGCCGTGGGGGTCGGTCTGGCTGGATCGCGAATCTGTGCTGTTTGGCGATTCAACATTGGCACTTCGTCAGTGGATGCGCGAGAAAGGCATTCAGTTTGAAATGAAGCAAAACGAACCGGAAGATCATTTTGGTTCACTGCTGTTGATGGCTGCGTGGTTGGCGGAGAATGGTCGCCAGACAGAATGCGAAGAATTGCTGGCATGGCACCTTTTTCCGTGGTCAACACGTTTTCTTGATGTTTTTATCGAAAAAGCAGAACACCCTTTCTACCGTGCACTGGGTGAACTGGCTCGCTTAACGCTGGCGCAATGGCAATCACAACTGTTAATTCCTGTCGCGGTTAAACCGCTGTTTCGATAG", - "dna_sequence_length": 615, - "functions": [ - "twin-argninine leader-binding protein for DmsA and TorA" - ], - "id": "CDS_1579", - "location": [ - [ - "NC_000913", - 1664506, - "+", - 615 - ] - ], - "md5": "87f909599464635a06514470f15f5359", - "parent_gene": "", - "protein_md5": "87b32fe0a9126a345fd5dd213ff708f5", - "protein_translation": "MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWETQWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDSTLALRQWMREKGIQFEMKQNEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWSTRFLDVFIEKAEHPFYRALGELARLTLAQWQSQLLIPVAVKPLFR", - "protein_translation_length": 204, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1587" - ], - [ - "gene_synonym", - "clcB" - ], - [ - "gene_synonym", - "NP_416109.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0005317" - ], - [ - "gene_synonym", - "b1592" - ], - [ - "gene_synonym", - "JW5263" - ], - [ - "gene_synonym", - "mriT" - ], - [ - "gene_synonym", - "ynfJ" - ], - [ - "gene_synonym", - "GI:90111303" - ], - [ - "gene_synonym", - "EcoGene:EG13848" - ], - [ - "gene_synonym", - "GeneID:947179" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76175" - ] - ], - "dna_sequence": "ATGTTCCACCGTCTGCTTATCGCAACAGTCGTCGGTATTCTCGCGGCCTTTGCCGTTGCCGGGTTTCGTCATGCGATGCTGCTACTGGAGTGGTTGTTCCTCAATAATGACTCCGGCAGTCTGGTCAATGCAGCGACAAACCTTTCCCCCTGGCGACGGTTGCTAACTCCGGCGCTCGGCGGACTGGCGGCGGGTTTGTTGCTGATGGGCTGGCAGAAATTTACCCAACAACGCCCTCATGCGCCGACCGATTATATGGAAGCGTTGCAAACCGATGGACAGTTCGATTACGCAGCAAGCCTGGTTAAATCGCTTGCCTCTCTGCTGGTAGTAACCAGCGGCAGTGCAATTGGTCGCGAAGGTGCGATGATTCTTTTAGCTGCCCTTGCCGCCTCCTGTTTTGCCCAACGTTTTACGCCACGCCAGGAGTGGAAATTATGGATCGCCTGTGGGGCCGCGGCGGGAATGGCTGCGGCCTATCGTGCCCCGCTTGCTGGCAGTTTATTTATAGCCGAAGTGCTGTTTGGCACTATGATGTTGGCCTCTCTCGGCCCGGTGATTATTTCCGCCGTCGTGGCATTGCTGGTTAGCAATCTGATTAATCATAGCGACGCGTTACTCTACAACGTACAACTCTCAGTGACGGTTCAGGCTCGTGACTATGCGCTGATTATCAGTACAGGTGTGCTGGCAGGTCTGTGCGGACCACTGTTGTTAACGTTAATGAACGCCTGTCATCGTGGATTTGTGAGTCTCAAACTTGCGCCGCCCTGGCAACTGGCACTAGGCGGGTTGATCGTGGGTCTGCTTTCCCTGTTCACACCTGCAGTGTGGGGCAACGGCTATAGCACCGTACAATCCTTTTTAACCGCCCCACCACTGTTAATGATCATTGCCGGGATCTTCCTTTGTAAACTGTGTGCCGTGCTGGCGAGTAGCGGTTCCGGCGCACCCGGTGGGGTCTTTACACCGACGCTATTTATCGGTCTTGCCATTGGCATGTTGTATGGTCGTAGCCTGGGATTATGGTTCCCTGATGGCGAAGAAATTACACTTTTACTCGGATTGACCGGGATGGCGACACTGTTGGCGGCGACCACGCACGCGCCGATTATGTCGACGTTGATGATATGTGAAATGACCGGGGAGTATCAGCTACTCCCCGGTTTATTGATTGCCTGCGTAATTGCGTCGGTAATTTCGCGGACGTTACACCGTGACTCTATCTACCGCCAGCACACTGCGCAGCATAGCTAA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P0A6E9" - ], - [ - "gene_synonym", - "b1593" - ], - [ - "gene_synonym", - "ECK1588" - ], - [ - "gene_synonym", - "GI:90111304" - ], - [ - "gene_synonym", - "EcoGene:EG13849" - ], - [ - "gene_synonym", - "ynfK" - ] - ], - "dna_sequence": "ATGCTGAAGCGTTTCTTTATTACCGGTACAGACACTTCTGTAGGGAAAACGGTGGTTTCCCGCGCATTGCTACAAGCGTTAGCCTCCCAGGGAAAAACGGTTGCGGGATATAAACCCGTAGCGAAGGGGAGCAAAGAGACACCCGAAGGGCTGCGTAATAAAGATGCCCTGGTGTTGCAGAGTGTTTCAACCATCGAACTGCCTTATGAAGCAGTTAATCCTATCGCGTTAAGCGAAGAAGAAAGTAGCGTGGCGCACAGTTGCCCAATCAATTACACCCTCATTTCAAACGGCCTGGCAAACCTGACCGAAAAAGTCGATCATGTCGTGGTAGAAGGGACTGGCGGCTGGCGCAGTCTGATGAATGATTTGCGTCCACTCTCTGAATGGGTAGTGCAGGAACAACTGCCGGTGTTGATGGTTGTCGGTATTCAGGAAGGTTGCATTAACCATGCACTGCTAACAGCTCAGGCGATCGCCAACGACGGGCTGCCGCTCATTGGCTGGGTGGCTAACCGAATCAACCCAGGACTGGCGCATTATGCGGAAATCATTGATGTGCTGGGTAAAAAACTTCCGGCACCGCTCATTGGTGAACTGCCTTATCTGCCGCGCGCCGAACAGCGTGAACTGGGGCAATACATCCGCTTAGCTATGCTGCGCAGTGTGCTGGCGGTAGATAGAGTCACGGTGTAA", - "dna_sequence_length": 696, - "functions": [ - "putative dethiobiotin synthetase" - ], - "id": "CDS_1581", - "location": [ - [ - "NC_000913", - 1667219, - "-", - 696 - ] - ], - "md5": "851fa027fa229a4440c05796ebeea90b", - "parent_gene": "", - "protein_md5": "6dcc81da5da8cb8ff7230e9915b177da", - "protein_translation": "MLKRFFITGTDTSVGKTVVSRALLQALASQGKTVAGYKPVAKGSKETPEGLRNKDALVLQSVSTIELPYEAVNPIALSEEESSVAHSCPINYTLISNGLANLTEKVDHVVVEGTGGWRSLMNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIANDGLPLIGWVANRINPGLAHYAEIIDVLGKKLPAPLIGELPYLPRAEQRELGQYIRLAMLRSVLAVDRVTV", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13156" - ], - [ - "gene_synonym", - "mlc" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P50456" - ], - [ - "gene_synonym", - "NP_416111.1" - ], - [ - "gene_synonym", - "b1594" - ], - [ - "gene_synonym", - "ASAP:ABE-0005323" - ], - [ - "gene_synonym", - "ECK1589" - ], - [ - "gene_synonym", - "dgsA" - ], - [ - "gene_synonym", - "GeneID:945510" - ], - [ - "gene_synonym", - "GI:16129552" - ], - [ - "gene_synonym", - "JW1586" - ] - ], - "dna_sequence": "GTGGTTGCTGAAAACCAGCCTGGGCACATTGATCAAATAAAGCAGACCAACGCGGGCGCGGTTTATCGCCTGATTGATCAGCTTGGTCCAGTCTCGCGTATCGATCTTTCCCGTCTGGCGCAACTGGCTCCTGCCAGTATCACTAAAATTGTCCGTGAGATGCTCGAAGCACACCTGGTGCAAGAGCTGGAAATCAAAGAAGCGGGGAACCGTGGCCGTCCGGCGGTGGGGCTGGTGGTTGAAACTGAAGCCTGGCACTATCTTTCTCTGCGCATTAGTCGCGGGGAGATTTTCCTTGCTCTGCGCGATCTGAGCAGCAAACTGGTGGTGGAAGAGTCGCAGGAACTGGCGTTAAAAGATGACTTGCCATTGCTGGATCGTATTATTTCCCATATCGATCAGTTTTTTATCCGCCACCAGAAAAAACTTGAGCGTCTAACTTCGATTGCCATAACCTTGCCGGGAATTATTGATACGGAAAATGGTATTGTACATCGCATGCCGTTCTACGAGGATGTAAAAGAGATGCCGCTCGGCGAGGCGCTGGAGCAGCATACCGGCGTTCCGGTTTATATTCAGCATGATATCAGCGCATGGACGATGGCAGAGGCCTTGTTTGGTGCCTCACGCGGGGCGCGCGATGTGATTCAGGTGGTTATCGATCACAACGTGGGGGCGGGCGTCATTACCGATGGTCATCTGCTACACGCAGGCAGCAGTAGTCTCGTGGAAATAGGCCACACACAGGTCGACCCGTATGGGAAACGCTGTTATTGCGGGAATCACGGCTGCCTCGAAACCATCGCCAGCGTGGACAGTATTCTTGAGCTGGCACAGCTGCGTCTTAATCAATCCATGAGCTCGATGTTACATGGACAACCGTTAACCGTGGACTCATTGTGTCAGGCGGCATTGCGCGGCGATCTACTGGCAAAAGACATCATTACCGGGGTGGGCGCGCATGTCGGGCGCATTCTTGCCATCATGGTGAATTTATTTAACCCACAAAAAATACTGATTGGCTCACCGTTAAGTAAAGCGGCAGATATCCTCTTCCCGGTCATCTCAGACAGCATCCGTCAGCAGGCCCTTCCTGCGTATAGTCAGCACATCAGCGTTGAGAGTACTCAGTTTTCTAACCAGGGCACGATGGCAGGCGCTGCACTGGTAAAAGACGCGATGTATAACGGTTCTTTGTTGATTCGTCTGTTGCAGGGTTAA", 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"gene_synonym", - "ynfL" - ], - [ - "gene_synonym", - "EcoGene:EG13850" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77559" - ], - [ - "gene_synonym", - "ECK1590" - ], - [ - "gene_synonym", - "JW1587" - ], - [ - "gene_synonym", - "GI:16129553" - ], - [ - "gene_synonym", - "NP_416112.1" - ] - ], - "dna_sequence": "ATGAATATTGAACTTCGTCATCTGCGTTACTTTGTTGCTGTTGCGGAAGAGCTGCATTTCGGGCGCGCCGCTGCCCGCCTGAATATTTCGCAACCGCCGCTAAGTCAGCAGATTCAGGCGCTGGAGCAACAAATTGGTGCCCGACTGCTGGCACGAACCAATCGCAGTGTATTGCTGACGGCAGCAGGAAAACAGTTTCTTGCAGATAGTCGGCAAATCCTGTCTATGGTGGATGACGCTGCCGCTCGCGCTGAAAGGCTGCATCAGGGTGAAGCGGGGGAGTTGCGCATTGGTTTTACTTCGTCGGCTCCTTTTATTCGGGCGGTGTCCGATACGTTATCGCTGTTTCGCCGTGATTATCCTGATGTCCATTTACAAACCCGCGAAATGAACACTCGCGAGCAAATCGCTCCGCTCATTGAAGGAACGCTGGATATGGGATTGCTGCGTAACACAGCGTTACCGGAGTCGCTTGAACACGCAGTCATCGTCCATGAACCGCTTATGGCGATGATCCCGCACGATCATCCCCTGGCAAATAACCCGAATGTAACGCTGGCTGAACTGGCGAAAGAACCCTTTGTCTTTTTTGATCCGCACGTCGGGACAGGGCTGTATGACGATATTCTCGGGCTGATGCGACGTTACCATTTGACGCCCGTCATCACTCAGGAGGTGGGCGAGGCAATGACCATCATCGGTCTGGTTTCCGCCGGTCTGGGTGTTTCAATTTTGCCTGCGTCATTTAAACGTGTTCAGCTCAACGAAATGCGCTGGGTGCCGATTGCTGAAGAGGATGCGGTTTCTGAAATGTGGTTGGTCTGGCCGAAACATCATGAACAAAGTCCGGCTGCGCGTAACTTTCGTATTCATCTGCTGAATGCTCTCAGGTGA", - "dna_sequence_length": 894, - "functions": [ - "LysR family putative transcriptional regulator" - ], 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"GTGAGCCGTACTACAACTGTTGATGGCGCTCCGGCAAGCGACACTGACAAGCAAAGCATTTCTCAGCCAAATCAATTTATTAAACGCGGTACGCCGCAATTTATGCGCGTCACCCTGGCGCTGTTCTCTGCCGGACTGGCAACATTTGCACTTCTCTATTGTGTGCAGCCTATCCTTCCGGTGCTTTCGCAGGAGTTTGGCTTAACCCCCGCGAACAGTAGTATTTCACTGTCCATTTCCACGGCGATGTTGGCTATTGGTTTGCTGTTTACTGGCCCGCTATCCGATGCCATTGGTCGCAAACCAGTGATGGTCACGGCGCTACTGTTGGCCTCCATTTGTACGTTACTTTCGACAATGATGACCAGCTGGCACGGCATTTTGATTATGCGCGCCTTGATTGGGCTTTCGTTAAGTGGCGTGGCAGCTGTTGGCATGACTTATCTTAGCGAGGAAATCCATCCCAGTTTCGTGGCCTTTTCAATGGGGTTGTATATCAGCGGCAACTCAATTGGCGGCATGAGCGGACGCTTAATTAGCGGTGTCTTCACGGACTTTTTCAACTGGCGAATTGCTCTGGCGGCAATCGGTTGTTTCGCGCTGGCCTCGGCGTTGATGTTCTGGAAAATCCTCCCTGAATCACGCCATTTTCGCCCGACTTCGCTGCGCCCTAAGACGTTGTTTATCAACTTTCGTCTGCACTGGCGTGACCGGGGATTACCGTTATTGTTCGCAGAAGGCTTTTTGCTGATGGGGTCGTTCGTCACGCTGTTTAATTACATCGGCTATCGGTTGATGCTCTCCCCCTGGCATGTCAGTCAGGCCGTGGTTGGCTTATTATCGCTGGCTTATTTGACCGGTACATGGAGCTCACCCAAAGCCGGAACCATGACCACCCGCTATGGGCGTGGTCCAGTGATGTTGTTTTCGACGGGGGTTATGCTGTTTGGTTTACTGATGACCTTATTCAGCTCGCTGTGGCTGATCTTTGCCGGAATGTTACTCTTCTCAGCAGGATTCTTCGCAGCCCACTCAGTAGCCAGCAGCTGGATCGGCCCCCGCGCAAAACGCGCTAAAGGCCAGGCCTCCTCGCTGTATCTGTTCAGTTACTATCTGGGGTCGAGTATTGCCGGGACGCTGGGTGGTGTTTTCTGGCATAACTATGGCTGGAACGGCGTCGGCGCATTTATTGCTCTGATGCTGGTCATTGCTCTGCTGGTCGGGACGCGTTTGCATCGTCGTCTGCACGCCTGA", 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"gene_synonym", - "GI:90111305" - ], - [ - "gene_synonym", - "ASAP:ABE-0005337" - ], - [ - "gene_synonym", - "ECK1592" - ], - [ - "gene_synonym", - "JW5826" - ], - [ - "gene_synonym", - "EcoGene:EG12149" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36560" - ] - ], - "dna_sequence": "ATGAAAAAAGTATTAGCTCTGGTTGTTGCCGCTGCTATGGGTCTGTCTTCTGCCGCCTTTGCTGCAGAGACTACGACCACACCTGCTCCGACTGCGACGACCACCAAAGCAGCGCCGGCGAAAACTACACATCATAAAAAACAGCATAAAGCAGCACCTGCCCAGAAAGCGCAGGCGGCTAAAAAGCATCATAAAAATACGAAAGCTGAACAGAAAGCCCCTGAACAAAAAGCGCAGGCAGCGAAGAAACACGCCAAGAAACACAGCCATCAGCAACCGGCAAAACCTGCTGCACAACCCGCAGCGTAA", - "dna_sequence_length": 309, - "functions": [ - "acid shock-inducible periplasmic protein" - ], - "id": "CDS_1585", - "location": [ - [ - "NC_000913", - 1671376, - "+", - 309 - ] - ], - "md5": "70e586cab70835a2f495e0f57e187d90", - "parent_gene": "", - "protein_md5": "077a2fd4f8bd8e5f72835c06298ba240", - "protein_translation": "MKKVLALVVAAAMGLSSAAFAAETTTTPAPTATTTKAAPAKTTHHKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAKKHSHQQPAKPAAQPAA", - "protein_translation_length": 102, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:A5A617" - ], - [ - "gene_synonym", - "b4601" - ], - [ - "gene_synonym", - "YP_001165320.1" - ], - [ - "gene_synonym", - "ydgU" - ], - [ - "gene_synonym", - "GeneID:5061510" - ], - [ - "gene_synonym", - "ECK4410" - ], - [ - "gene_synonym", - "GI:145698267" - ], - [ - "gene_synonym", - "EcoGene:EG14462" - ] - ], - "dna_sequence": "ATGGTGGGCCGTTATCGCTTTGAGTTCATTCTGATCATCCTTATTTTATGCGCACTGATTACCGCCCGTTTTTATCTTTCCTGA", - "dna_sequence_length": 84, - "functions": [ - "stationary phase-induced protein" - ], - "id": "CDS_1586", - "location": [ - [ - "NC_000913", - 1671777, - "+", - 84 - ] - ], - "md5": "65be4c44892ff509e4fa25f9e0c0694c", - "parent_gene": "", - "protein_md5": "7ca0937e55a48698d89f2c732218ac76", - "protein_translation": "MVGRYRFEFILIILILCALITARFYLS", - "protein_translation_length": 27, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13925" - ], - [ - "gene_synonym", - "b1598" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76176" - ], - [ - "gene_synonym", - "NP_416115.1" - ], - [ - "gene_synonym", - "ydgD" - ], - [ - "gene_synonym", - "ASAP:ABE-0005340" - ], - [ - "gene_synonym", - "GI:16129556" - ], - [ - "gene_synonym", - "ECK1593" - ], - [ - "gene_synonym", - "JW1590" - ], - [ - "gene_synonym", - "GeneID:946436" - ] - ], - "dna_sequence": "ATGCGTACAACCATTGCTGTAGTGTTGGGTGCAATTAGTTTGACGTCTGCTTTTGTGTTTGCAGATAAACCAGACGTTGCCAGATCGGCAAACGATGAGGTCAGCACCCTGTTTTTTGGTCATGATGATCGTGTGCCAGTGAATGACACGACCCAATCACCGTGGGATGCGGTTGGGCAACTGGAAACGGCCAGCGGCAATTTATGTACGGCGACGCTGATTGCACCCAATCTGGCATTAACGGCAGGACACTGTTTATTGACACCTCCAAAGGGTAAAGCCGATAAAGCAGTGGCGCTGCGTTTTGTGTCAAATAAAGGTCTTTGGCGCTATGAGATCCACGACATAGAAGGCCGCGTTGATCCGACACTGGGAAAGCGGTTAAAAGCAGATGGGGATGGTTGGATTGTACCTCCCGCAGCCGCGCCGTGGGACTTCGGATTGATTGTGCTACGTAATCCCCCTTCTGGCATTACGCCGTTGCCGTTATTTGAGGGAGATAAAGCCGCGCTTACCGCCGCATTAAAAGCGGCAGGTCGTAAAGTGACTCAGGCAGGCTACCCTGAAGATCATCTCGATACGTTGTACAGTCATCAAAACTGTGAAGTGACTGGCTGGGCGCAAACGTCGGTGATGTCACATCAGTGCGATACCTTGCCGGGTGACAGCGGTTCGCCTCTGATGTTGCATACCGATGACGGCTGGCAATTAATTGGGGTGCAAAGTTCGGCTCCTGCCGCGAAAGATCGCTGGCGCGCCGATAACCGGGCCATTTCTGTTACCGGTTTTCGCGACAAGCTGGATCAACTGTCGCAAAAATAA", - "dna_sequence_length": 822, - "functions": [ - "putative peptidase" - ], - "id": "CDS_1587", - "location": [ - [ - "NC_000913", - 1671960, - "+", - 822 - ] - ], - "md5": "bb4c44c33535dc352417b9e07e10875a", - "parent_gene": "", - "protein_md5": "4ddda3e85fa4e8e906a45c7ceaa30b88", - "protein_translation": "MRTTIAVVLGAISLTSAFVFADKPDVARSANDEVSTLFFGHDDRVPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIEGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITPLPLFEGDKAALTAALKAAGRKVTQAGYPEDHLDTLYSHQNCEVTGWAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISVTGFRDKLDQLSQK", - "protein_translation_length": 273, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13926" - ], - [ - "gene_synonym", - "b1599" - ], - [ - "gene_synonym", - "GI:16129557" - ], - [ - "gene_synonym", - "GeneID:947333" - ], - [ - "gene_synonym", - "NP_416116.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69210" - ], - [ - "gene_synonym", - "ASAP:ABE-0005343" - ], - [ - "gene_synonym", - "mdtI" - ], - [ - "gene_synonym", - "ydgE" - ], - [ - "gene_synonym", - "ECK1594" - ], - [ - "gene_synonym", - "JW1591" - ] - ], - "dna_sequence": "ATGGCGCAGTTTGAATGGGTTCACGCCGCCTGGCTGGCATTGGCAATCGTGCTGGAAATCGTTGCTAACGTCTTTTTGAAATTTTCTGACGGCTTTCGTCGCAAAATATTTGGCTTGCTCTCCCTGGCGGCGGTGCTGGCTGCCTTTAGTGCGCTTTCTCAAGCCGTTAAAGGGATCGACTTGTCTGTCGCTTATGCATTGTGGGGCGGGTTTGGTATTGCCGCCACGTTAGCCGCAGGTTGGATCTTGTTTGGTCAACGGTTAAATCGTAAAGGCTGGATTGGCCTGGTCTTGCTGTTGGCTGGAATGATCATGGTGAAACTTGCCTGA", - "dna_sequence_length": 330, - "functions": [ - "multidrug efflux system transporter" - ], - "id": "CDS_1588", - "location": [ - [ - "NC_000913", - 1673149, - "-", - 330 - ] - ], - "md5": "1bf40a8a0af5a3fd8e0239a5fb1a21f3", - "parent_gene": "", - "protein_md5": "ba3dc74f48fa2edfcfa472ce207310d8", - "protein_translation": "MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMIMVKLA", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13927" - ], - [ - "gene_synonym", - "ECK1595" - ], - [ - "gene_synonym", - "GeneID:946139" - ], - [ - "gene_synonym", - "b1600" - ], - [ - "gene_synonym", - "JW1592" - ], - [ - "gene_synonym", - "GI:16129558" - ], - [ - "gene_synonym", - "ASAP:ABE-0005345" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69212" - ], - [ - "gene_synonym", - "mdtJ" - ], - [ - "gene_synonym", - "ydgF" - ], - [ - "gene_synonym", - "NP_416117.1" - ] - ], - "dna_sequence": "ATGTATATTTATTGGATTTTATTAGGTCTGGCTATTGCTACAGAAATTACCGGTACGCTGTCAATGAAATGGGCGAGCGTCAGTGAGGGAAATGGCGGCTTTATTTTAATGCTGGTGATGATTTCTCTGTCGTATATATTTCTCTCTTTCGCCGTTAAAAAAATCGCCTTAGGCGTAGCTTATGCGCTGTGGGAAGGTATCGGTATTTTATTTATTACCTTGTTTAGCGTTTTGTTATTCGACGAAAGTTTATCGCTGATGAAAATTGCCGGGTTAACCACCCTGGTCGCCGGGATTGTGTTGATAAAATCAGGTACCCGTAAAGCGCGTAAACCTGAACTGGAGGTGAACCATGGCGCAGTTTGA", - "dna_sequence_length": 366, - "functions": [ - "multidrug efflux system transporter" - ], - "id": "CDS_1589", - "location": [ - [ - "NC_000913", - 1673501, - "-", - 366 - ] - ], - "md5": "94a1f7e549491c9dfbe259581cfade63", - "parent_gene": "", - "protein_md5": "b5a4baf3fdd1848d2adfdb8aa5d83a74", - "protein_translation": "MYIYWILLGLAIATEITGTLSMKWASVSEGNGGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRKARKPELEVNHGAV", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946142" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFS5" - ], - [ - "gene_synonym", - "EcoGene:EG13928" - ], - [ - "gene_synonym", - "JW1593" - ], - [ - "gene_synonym", - "GI:16129559" - ], - [ - "gene_synonym", - "NP_416118.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0005350" - ], - [ - "gene_synonym", - "tqsA" - ], - [ - "gene_synonym", - "b1601" - ], - [ - "gene_synonym", - "ydgG" - ], - [ - "gene_synonym", - "ECK1596" - ] - ], - "dna_sequence": "ATGGCAAAGCCGATCATCACGCTCAATGGCCTAAAAATCGTCATTATGTTGGGAATGCTGGTCATTATTCTCTGCGGTATCCGTTTTGCCGCCGAGATCATCGTGCCGTTTATTCTCGCATTATTTATTGCTGTTATTCTTAACCCGCTGGTGCAACACATGGTCCGCTGGCGTGTGCCGCGTGTACTGGCGGTGTCGATTTTGATGACCATCATCGTGATGGCGATGGTGTTGCTATTAGCTTATCTGGGTTCCGCGCTCAACGAGTTGACGCGGACGTTACCGCAATATCGCAACTCTATTATGACGCCGCTGCAAGCGCTTGAACCGTTGTTGCAACGCGTAGGGATTGACGTCTCAGTTGACCAGCTGGCGCATTATATTGATCCGAACGCGGCGATGACGTTGCTCACCAACTTATTGACGCAGTTATCTAATGCCATGTCATCAATATTTTTATTGCTGCTGACGGTGCTGTTTATGCTGCTCGAAGTGCCACAATTGCCCGGAAAATTTCAGCAAATGATGGCGCGTCCGGTTGAAGGGATGGCGGCGATTCAACGTGCGATTGACAGTGTTTCTCATTATCTGGTGCTGAAAACAGCCATCAGCATCATCACCGGCCTGGTCGCCTGGGCGATGCTCGCCGCACTCGATGTTCGCTTCGCTTTTGTCTGGGGATTGCTGGCCTTTGCGCTTAATTACATCCCGAATATTGGTTCAGTCCTCGCGGCAATCCCCCCTATCGCTCAGGTACTGGTGTTTAATGGCTTCTACGAAGCGTTGCTGGTGCTGGCGGGATATCTGCTGATTAATCTGGTCTTCGGCAATATTCTGGAGCCGCGTATCATGGGGCGTGGGCTGGGGCTTTCCACATTGGTGGTATTTTTGTCGTTGATTTTTTGGGGATGGTTGTTAGGACCGGTGGGTATGCTGCTTTCCGTGCCGTTGACAATTATTGTCAAAATTGCGCTTGAACAAACAGCGGGAGGTCAAAGCATCGCCGTTCTGTTAAGCGATCTCAATAAAGAGTGA", - "dna_sequence_length": 1035, - "functions": [ - "pheromone AI-2 transporter" - ], - "id": "CDS_1590", - "location": [ - [ - "NC_000913", - 1673913, - "+", - 1035 - ] - ], - "md5": "4bac6856cc686ce2d4b8a3438dbf309a", - "parent_gene": "", - "protein_md5": "d99504d69de835a8516b33bbf623b36c", - "protein_translation": "MAKPIITLNGLKIVIMLGMLVIILCGIRFAAEIIVPFILALFIAVILNPLVQHMVRWRVPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIMTPLQALEPLLQRVGIDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLFMLLEVPQLPGKFQQMMARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAALDVRFAFVWGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFGNILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQTAGGQSIAVLLSDLNKE", - "protein_translation_length": 344, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "pntB" - ], - [ - "gene_synonym", - "GeneID:946144" - ], - [ - "gene_synonym", - "b1602" - ], - [ - "gene_synonym", - "EcoGene:EG10745" - ], - [ - "gene_synonym", - "NP_416119.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0005352" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB67" - ], - [ - "gene_synonym", - "JW1594" - ], - [ - "gene_synonym", - "GI:16129560" - ], - [ - "gene_synonym", - "ECK1597" - ] - ], - "dna_sequence": "ATGTCTGGAGGATTAGTTACAGCTGCATACATTGTTGCCGCGATCCTGTTTATCTTCAGTCTGGCCGGTCTTTCGAAACATGAAACGTCTCGCCAGGGTAACAACTTCGGTATCGCCGGGATGGCGATTGCGTTAATCGCAACCATTTTTGGACCGGATACGGGTAATGTTGGCTGGATCTTGCTGGCGATGGTCATTGGTGGGGCAATTGGTATCCGTCTGGCGAAGAAAGTTGAAATGACCGAAATGCCAGAACTGGTGGCGATCCTGCATAGCTTCGTGGGTCTGGCGGCAGTGCTGGTTGGCTTTAACAGCTATCTGCATCATGACGCGGGAATGGCACCGATTCTGGTCAATATTCACCTGACGGAAGTGTTCCTCGGTATCTTCATCGGGGCGGTAACGTTCACGGGTTCGGTGGTGGCGTTCGGCAAACTGTGTGGCAAGATTTCGTCTAAACCATTGATGCTGCCAAACCGTCACAAAATGAACCTGGCGGCTCTGGTCGTTTCCTTCCTGCTGCTGATTGTATTTGTTCGCACGGACAGCGTCGGCCTGCAAGTGCTGGCATTGCTGATAATGACCGCAATTGCGCTGGTATTCGGCTGGCATTTAGTCGCCTCCATCGGTGGTGCAGATATGCCAGTGGTGGTGTCGATGCTGAACTCGTACTCCGGCTGGGCGGCTGCGGCTGCGGGCTTTATGCTCAGCAACGACCTGCTGATTGTGACCGGTGCGCTGGTCGGTTCTTCGGGGGCTATCCTTTCTTACATTATGTGTAAGGCGATGAACCGTTCCTTTATCAGCGTTATTGCGGGTGGTTTCGGCACCGACGGCTCTTCTACTGGCGATGATCAGGAAGTGGGTGAGCACCGCGAAATCACCGCAGAAGAGACAGCGGAACTGCTGAAAAACTCCCATTCAGTGATCATTACTCCGGGGTACGGCATGGCAGTCGCGCAGGCGCAATATCCTGTCGCTGAAATTACTGAGAAATTGCGCGCTCGTGGTATTAATGTGCGTTTCGGTATCCACCCGGTCGCGGGGCGTTTGCCTGGACATATGAACGTATTGCTGGCTGAAGCAAAAGTACCGTATGACATCGTGCTGGAAATGGACGAGATCAATGATGACTTTGCTGATACCGATACCGTACTGGTGATTGGTGCTAACGATACGGTTAACCCGGCGGCGCAGGATGATCCGAAGAGTCCGATTGCTGGTATGCCTGTGCTGGAAGTGTGGAAAGCGCAGAACGTGATTGTCTTTAAACGTTCGATGAACACTGGCTATGCTGGTGTGCAAAACCCGCTGTTCTTCAAGGAAAACACCCACATGCTGTTTGGTGACGCCAAAGCCAGCGTGGATGCAATCCTGAAAGCTCTGTAA", - "dna_sequence_length": 1389, - "functions": [ - "pyridine nucleotide transhydrogenase, beta subunit" - ], - "id": "CDS_1591", - "location": [ - [ - "NC_000913", - 1676360, - "-", - 1389 - ] - ], - "md5": "32f9dae75eb95ccb45193c3db3bb86ae", - "parent_gene": "", - "protein_md5": "178bd59e4db9f686a6bf537347b3f52c", - "protein_translation": "MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIALIATIFGPDTGNVGWILLAMVIGGAIGIRLAKKVEMTEMPELVAILHSFVGLAAVLVGFNSYLHHDAGMAPILVNIHLTEVFLGIFIGAVTFTGSVVAFGKLCGKISSKPLMLPNRHKMNLAALVVSFLLLIVFVRTDSVGLQVLALLIMTAIALVFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGSSTGDDQEVGEHREITAEETAELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGANDTVNPAAQDDPKSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTHMLFGDAKASVDAILKAL", - "protein_translation_length": 462, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10744" - ], - [ - "gene_synonym", - "GeneID:946628" - ], - [ - "gene_synonym", - "NP_416120.1" - ], - [ - "gene_synonym", - "b1603" - ], - [ - "gene_synonym", - "pntA" - ], - [ - "gene_synonym", - "ECK1598" - ], - [ - "gene_synonym", - "ASAP:ABE-0005354" - ], - [ - "gene_synonym", - "JW1595" - ], - [ - "gene_synonym", - "GI:16129561" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07001" - ] - ], - "dna_sequence": "ATGCGAATTGGCATACCAAGAGAACGGTTAACCAATGAAACCCGTGTTGCAGCAACGCCAAAAACAGTGGAACAGCTGCTGAAACTGGGTTTTACCGTCGCGGTAGAGAGCGGCGCGGGTCAACTGGCAAGTTTTGACGATAAAGCGTTTGTGCAAGCGGGCGCTGAAATTGTAGAAGGGAATAGCGTCTGGCAGTCAGAGATCATTCTGAAGGTCAATGCGCCGTTAGATGATGAAATTGCGTTACTGAATCCTGGGACAACGCTGGTGAGTTTTATCTGGCCTGCGCAGAATCCGGAATTAATGCAAAAACTTGCGGAACGTAACGTGACCGTGATGGCGATGGACTCTGTGCCGCGTATCTCACGCGCACAATCGCTGGACGCACTAAGCTCGATGGCGAACATCGCCGGTTATCGCGCCATTGTTGAAGCGGCACATGAATTTGGGCGCTTCTTTACCGGGCAAATTACTGCGGCCGGGAAAGTGCCACCGGCAAAAGTGATGGTGATTGGTGCGGGTGTTGCAGGTCTGGCCGCCATTGGCGCAGCAAACAGTCTCGGCGCGATTGTGCGTGCATTCGACACCCGCCCGGAAGTGAAAGAACAAGTTCAAAGTATGGGCGCGGAATTCCTCGAGCTGGATTTTAAAGAGGAAGCTGGCAGCGGCGATGGCTATGCCAAAGTGATGTCGGACGCGTTCATCAAAGCGGAAATGGAACTCTTTGCCGCCCAGGCAAAAGAGGTCGATATCATTGTCACCACCGCGCTTATTCCAGGCAAACCAGCGCCGAAGCTAATTACCCGTGAAATGGTTGACTCCATGAAGGCGGGCAGTGTGATTGTCGACCTGGCAGCCCAAAACGGCGGCAACTGTGAATACACCGTGCCGGGTGAAATCTTCACTACGGAAAATGGTGTCAAAGTGATTGGTTATACCGATCTTCCGGGCCGTCTGCCGACGCAATCCTCACAGCTTTACGGCACAAACCTCGTTAATCTGCTGAAACTGTTGTGCAAAGAGAAAGACGGCAATATCACTGTTGATTTTGATGATGTGGTGATTCGCGGCGTGACCGTGATCCGTGCGGGCGAAATTACCTGGCCGGCACCGCCGATTCAGGTATCAGCTCAGCCGCAGGCGGCACAAAAAGCGGCACCGGAAGTGAAAACTGAGGAAAAATGTACCTGCTCACCGTGGCGTAAATACGCGTTGATGGCGCTGGCAATCATTCTTTTTGGCTGGATGGCAAGCGTTGCGCCGAAAGAATTCCTTGGGCACTTCACCGTTTTCGCGCTGGCCTGCGTTGTCGGTTATTACGTGGTGTGGAATGTATCGCACGCGCTGCATACACCGTTGATGTCGGTCACCAACGCGATTTCAGGGATTATTGTTGTCGGAGCACTGTTGCAGATTGGCCAGGGCGGCTGGGTTAGCTTCCTTAGTTTTATCGCGGTGCTTATAGCCAGCATTAATATTTTCGGTGGCTTCACCGTGACTCAGCGCATGCTGAAAATGTTCCGCAAAAATTAA", - "dna_sequence_length": 1533, - "functions": [ - "pyridine nucleotide transhydrogenase, alpha subunit" - ], - "id": "CDS_1592", - "location": [ - [ - "NC_000913", - 1677903, - "-", - 1533 - ] - ], - "md5": "86fbaa6e89d9064ccfe6911a4c489b27", - "parent_gene": "", - "protein_md5": "65a238b0a6d1c0270925394ee285a3b7", - "protein_translation": "MRIGIPRERLTNETRVAATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELMQKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNLLKLLCKEKDGNITVDFDDVVIRGVTVIRAGEITWPAPPIQVSAQPQAAQKAAPEVKTEEKCTCSPWRKYALMALAIILFGWMASVAPKEFLGHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFRKN", - "protein_translation_length": 510, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1604" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76177" - ], - [ - "gene_synonym", - "EcoGene:EG13929" - ], - [ - "gene_synonym", - "ECK1599" - ], - [ - "gene_synonym", - "ydgH" - ], - [ - "gene_synonym", - "NP_416121.1" - ], - [ - "gene_synonym", - "JW1596" - ], - [ - "gene_synonym", - "GeneID:945117" - ], - [ - "gene_synonym", - "ASAP:ABE-0005359" - ], - [ - "gene_synonym", - "GI:16129562" - ] - ], - "dna_sequence": "ATGAAGCTTAAGAACACCCTCCTGGCGTCGGCACTGCTTTCTGCTATGGCATTCTCCGTTAACGCAGCAACAGAACTGACACCGGAGCAAGCGGCAGCGGTTAAACCTTTTGACCGTGTAGTGGTTACCGGTCGTTTTAATGCTATTGGCGAAGCGGTGAAAGCCGTTTCTCGTCGCGCAGATAAAGAAGGTGCCGCCTCTTTTTATGTTGTCGACACTTCTGATTTTGGTAACAGCGGTAACTGGCGTGTGGTCGCTGACCTCTATAAAGCCGATGCTGAAAAAGCAGAAGAAACAAGTAATCGCGTAATTAACGGTGTTGTCGAACTGCCGAAAGATCAGGCTGTTCTGATTGAACCGTTTGACACGGTCACCGTCCAGGGCTTCTATCGTAGCCAGCCAGAAGTCAATGATGCCATCACCAAAGCGGCAAAAGCGAAAGGTGCCTACTCTTTCTACATCGTTCGTCAAATCGATGCCAACCAGGGCGGCAACCAGCGTATTACTGCATTCATCTATAAAAAAGATGCTAAGAAACGTATCGTCCAGAGCCCGGATGTGATCCCGGCAGATTCCGAAGCAGGACGTGCAGCTCTGGCTGCCGGTGGCGAAGCCGCGAAGAAAGTTGAGATCCCGGGTGTTGCGACTACCGCATCACCAAGTTCTGAAGTCGGTCGCTTCTTTGAAACCCAGTCATCAAAAGGCGGGCGTTACACCGTCACGCTCCCGGATGGCACTAAAGTCGAAGAACTGAACAAAGCGACCGCAGCGATGATGGTCCCGTTCGACAGCATCAAATTCTCTGGCAACTACGGCAACATGACCGAAGTCTCCTATCAGGTTGCGAAACGTGCCGCGAAGAAAGGTGCTAAGTATTACCACATCACCCGCCAGTGGCAGGAACGTGGTAATAACCTGACCGTCAGCGCAGATCTGTATAAATAA", - "dna_sequence_length": 945, - "functions": [ - "DUF1471 family periplasmic protein" - ], - "id": "CDS_1593", - "location": [ - [ - "NC_000913", - 1678427, - "+", - 945 - ] - ], - "md5": "64336b0bcf0fe10193496f645489846d", - "parent_gene": "", - "protein_md5": "9fad2f142923ce892e567411fd6817d6", - "protein_translation": "MKLKNTLLASALLSAMAFSVNAATELTPEQAAAVKPFDRVVVTGRFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNRVINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDANQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTASPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTEVSYQVAKRAAKKGAKYYHITRQWQERGNNLTVSADLYK", - "protein_translation_length": 314, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416122.1" - ], - [ - "gene_synonym", - "GeneID:945159" - ], - [ - "gene_synonym", - "EcoGene:EG13930" - ], - [ - "gene_synonym", - "b1605" - ], - [ - "gene_synonym", - "arcD" - ], - [ - "gene_synonym", - "ydgI" - ], - [ - "gene_synonym", - "ECK1600" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAE5" - ], - [ - "gene_synonym", - "ASAP:ABE-0005362" - ], - [ - "gene_synonym", - "JW1597" - ], - [ - "gene_synonym", - "GI:16129563" - ] - ], - "dna_sequence": "ATGGAAAAGAAACTGGGACTGAGCGCACTCACCGCGCTGGTATTAAGCTCAATGCTGGGCGCGGGTGTTTTCAGTCTGCCGCAAAATATGGCGGCAGTTGCCAGCCCGGCAGCACTGCTCATCGGCTGGGGTATTACTGGCGCTGGCATTTTATTGCTGGCCTTTGCCATGCTGATCCTCACGCGCATTCGTCCCGAACTTGACGGCGGTATCTTTACCTATGCCCGCGAAGGGTTTGGCGAGCTAATCGGCTTTTGTTCCGCATGGGGATACTGGCTGTGCGCAGTCATCGCCAACGTCTCCTATCTGGTGATCGTTTTTTCCGCGTTAAGCTTTTTTACGGACACGCCGGAATTGCGCCTGTTTGGCGATGGTAATACCTGGCAATCGATAGTCGGTGCATCGGCTTTATTGTGGATTGTTCACTTTTTGATCCTGCGCGGGGTGCAAACCGCTGCCAGCATTAACCTGGTGGCGACACTGGCAAAATTGTTGCCGCTGGGTCTGTTTGTTGTGCTGGCGATGATGATGTTCAAACTGGATACCTTCAAGCTCGACTTCACCGGACTTGCACTTGGCGTACCCGTTTGGGAACAGGTGAAAAACACCATGCTGATCACCCTGTGGGTTTTCATTGGTGTGGAAGGTGCCGTGGTTGTTTCTGCGCGTGCGCGTAATAAACGTGATGTTGGCAAAGCGACACTGCTGGCGGTTCTCTCCGCTCTGGGCGTTTACTTGCTGGTAACGCTGCTTTCGCTGGGTGTGGTGGCACGTCCTGAACTGGCTGAAATTCGTAACCCGTCAATGGCCGGTCTGATGGTGGAAATGATGGGACCATGGGGCGAAATCATCATCGCTGCCGGTTTGATCGTTTCCGTTTGCGGCGCGTACTTAAGCTGGACCATCATGGCAGCAGAAGTACCGTTCCTGGCCGCCACTCATAAAGCATTCCCGCGCATTTTTGCGCGCCAGAACGCACAAGCTGCGCCATCCGCCTCACTGTGGTTGACCAACATCTGCGTGCAAATTTGTCTGGTACTCATCTGGCTGACCGGTTCCGATTACAACACGTTGCTGACCATCGCCTCAGAAATGATTCTGGTGCCCTATTTCCTGGTCGGCGCGTTCTTGCTGAAAATCGCAACCCGTCCACTGCATAAAGCGGTAGGTGTCGGTGCCTGCATTTATGGCTTATGGTTATTGTACGCCTCTGGTCCAATGCACTTGCTGTTATCCGTTGTTCTGTATGCACCGGGGCTGCTGGTTTTCCTGTACGCGCGCAAAACGCATACCCATGATAATGTACTGAACCGTCAGGAAATGGTGCTGATTGGCATGCTGTTAATTGCCTCAGTTCCGGCGACCTGGATGCTGGTGGGATAA", - "dna_sequence_length": 1383, - "functions": [ - "putative arginine/ornithine antiporter transporter" - ], - "id": "CDS_1594", - "location": [ - [ - "NC_000913", - 1679557, - "+", - 1383 - ] - ], - "md5": "8b982464d8a672f5661116cbc03251d3", - "parent_gene": "", - "protein_md5": "238a138012d05b6096abecddb1b9b465", - "protein_translation": "MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWGITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVATLAKLLPLGLFVVLAMMMFKLDTFKLDFTGLALGVPVWEQVKNTMLITLWVFIGVEGAVVVSARARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVGACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIASVPATWMLVG", - "protein_translation_length": 460, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13189" - ], - [ - "gene_synonym", - "NP_416123.1" - ], - [ - "gene_synonym", - "b1606" - ], - [ - "gene_synonym", - "ydgB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFS3" - ], - [ - "gene_synonym", - "ECK1601" - ], - [ - "gene_synonym", - "JW1598" - ], - [ - "gene_synonym", - "folM" - ], - [ - "gene_synonym", - "GI:16129564" - ], - [ - "gene_synonym", - "GeneID:949096" - ], - [ - "gene_synonym", - "ASAP:ABE-0005364" - ] - ], - "dna_sequence": "ATGGGTAAAACCCAGCCCTTGCCAATATTAATTACTGGCGGAGGTCGTCGCATCGGCCTCGCCCTCGCATGGCATTTCATTAATCAAAAGCAACCGGTGATTGTCAGCTATCGGACACACTATCCAGCCATTGATGGACTGATTAATGCAGGTGCGCAGTGTATTCAGGCTGATTTTTCGACCAACGACGGTGTGATGGCGTTTGCCGATGAAGTACTAAAAAGCACCCATGGTCTGCGTGCTATTTTGCATAACGCCAGTGCGTGGATGGCGGAAAAACCGGGTGCGCCACTGGCCGACGTACTGGCTTGCATGATGCAGATCCACGTTAATACCCCATACCTGCTCAACCATGCGCTGGAAAGATTACTGCGTGGGCACGGACACGCCGCCAGCGATATCATTCACTTTACCGATTATGTGGTGGAGCGCGGTAGCGACAAACATATTGCGTATGCTGCAAGCAAAGCGGCACTGGATAATATGACCCGCTCGTTTGCCCGCAAGCTGGCACCGGAAGTGAAAGTGAATTCTATTGCGCCATCGCTGATCCTGTTTAATGAACATGATGATGCCGAATATCGACAACAGGCGCTGAATAAATCACTGATGAAAACCGCGCCTGGCGAGAAAGAAGTGATCGACCTGGTCGATTACTTACTTACCAGTTGCTTTGTCACCGGACGCAGTTTCCCACTTGATGGCGGTCGTCATCTGCGTTAA", - "dna_sequence_length": 723, - "functions": [ - "dihydromonapterin reductase, NADPH-dependent", - "dihydrofolate reductase isozyme" - ], - "id": "CDS_1595", - "location": [ - [ - "NC_000913", - 1680976, - "+", - 723 - ] - ], - "md5": "d1ebf81511d99da958cdeff8fa3745b3", - "parent_gene": "", - "protein_md5": "e24b22186b29bbe648b6dc199c53d44b", - "protein_translation": "MGKTQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLINAGAQCIQADFSTNDGVMAFADEVLKSTHGLRAILHNASAWMAEKPGAPLADVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDNMTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLTSCFVTGRSFPLDGGRHLR", - "protein_translation_length": 240, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945156" - ], - [ - "gene_synonym", - "b1607" - ], - [ - "gene_synonym", - "JW1599" - ], - [ - "gene_synonym", - "EcoGene:EG13191" - ], - [ - "gene_synonym", - "NP_416124.1" - ], - [ - "gene_synonym", - "ECK1602" - ], - [ - "gene_synonym", - "GI:16129565" - ], - [ - "gene_synonym", - "ydgC" - ], - [ - "gene_synonym", - "ASAP:ABE-0005366" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACX0" - ] - ], - "dna_sequence": "ATGGGGCTGGTAATCAAAGCCGCGCTCGGTGCGCTGGTAGTGCTGTTGATTGGTGTTTTAGCAAAAACGAAAAATTATTATATCGCCGGGCTGATTCCACTTTTCCCGACCTTTGCGCTTATCGCGCATTATATTGTTGCCAGCGAACGCGGCATTGAAGCCTTACGCGCAACCATCATTTTTAGTATGTGGTCGATTATTCCCTATTTTGTTTACCTGGTGTCGCTGTGGTATTTCACCGGAATGATGCGCTTGCCCGCCGCTTTTGTTGGTTCTGTTGCGTGTTGGGGGATAAGCGCATGGGTGTTGATTATATGCTGGATAAAGCTGCATTAA", - "dna_sequence_length": 336, - "functions": [ - "GlpM family inner membrane protein" - ], - "id": "CDS_1596", - "location": [ - [ - "NC_000913", - 1682030, - "-", - 336 - ] - ], - "md5": "02eb327c6107427668476cb8c04872e2", - "parent_gene": "", - "protein_md5": "b0b97b1fafbb337eb59c86e55531e4ce", - "protein_translation": "MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHYIVASERGIEALRATIIFSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWVLIICWIKLH", - "protein_translation_length": 111, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52108" - ], - [ - "gene_synonym", - "b1608" - ], - [ - "gene_synonym", - "NP_416125.2" - ], - [ - "gene_synonym", - "JW1600" - ], - [ - "gene_synonym", - "EcoGene:EG13190" - ], - [ - "gene_synonym", - "rstA" - ], - [ - "gene_synonym", - "urpT" - ], - [ - "gene_synonym", - "ECK1603" - ], - [ - "gene_synonym", - "GI:145698268" - ], - [ - "gene_synonym", - "ASAP:ABE-0005370" - ], - [ - "gene_synonym", - "GeneID:946199" - ] - ], - "dna_sequence": "ATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGCCGCGTACCTGGCAAAACATGATATGCAGGTTACCGTAGAGCCGCGCGGCGACCAGGCCGAAGAAACCATTTTGCGAGAAAATCCGGATTTGGTGTTACTCGACATCATGCTACCAGGCAAGGACGGCATGACCATTTGTCGTGATTTACGCGCAAAGTGGTCTGGACCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGCCCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGTCTCTGACTCCCTACAAAGCCCTGCATTTCGGCACGTTGACCATCGATCCCATCAACCGCGTAGTCACCCTGGCTAACACTGAAATCTCGCTCTCGACAGCTGATTTCGAATTATTGTGGGAATTAGCTACCCATGCCGGGCAAATCATGGACCGCGATGCATTGCTGAAAAATTTACGCGGCGTCAGTTATGACGGACTGGATCGTAGCGTGGACGTGGCTATTTCGCGGTTAAGAAAAAAACTGCTCGATAACGCCGCAGAACCTTATCGCATTAAAACTGTGCGTAACAAAGGCTATCTTTTTGCGCCTCATGCATGGGAATAA", - "dna_sequence_length": 720, - "functions": [ - "response regulator of RstAB two-component system" - ], - "id": "CDS_1597", - "location": [ - [ - "NC_000913", - 1682159, - "+", - 720 - ] - ], - "md5": "6b2ecdfc54980e3a57d57eb531205faf", - "parent_gene": "", - "protein_md5": "d2bb197bf93306a063ee18864155420c", - "protein_translation": "MNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRENPDLVLLDIMLPGKDGMTICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQNEQATLTKGLQETSLTPYKALHFGTLTIDPINRVVTLANTEISLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRSVDVAISRLRKKLLDNAAEPYRIKTVRNKGYLFAPHAWE", - "protein_translation_length": 239, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948870" - ], - [ - "gene_synonym", - "b1609" - ], - [ - "gene_synonym", - "NP_416126.1" - ], - [ - "gene_synonym", - "uspT" - ], - [ - "gene_synonym", - "EcoGene:EG11233" - ], - [ - "gene_synonym", - "JW1601" - ], - [ - "gene_synonym", - "ECK1604" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P18392" - ], - [ - "gene_synonym", - "rstB" - ], - [ - "gene_synonym", - "GI:16129567" - ], - [ - "gene_synonym", - "ASAP:ABE-0005372" - ] - ], - "dna_sequence": "ATGAAAAAACTGTTTATCCAGTTTTACCTGTTATTGTTTGTCTGCTTCCTTGTGATGTCTCTGCTGGTTGGGCTGGTGTACAAATTTACCGCCGAACGCGCGGGCAAACAGTCGCTGGATGATTTGATGAACAGTTCGCTGTATCTGATGCGCAGCGAATTGCGTGAGATCCCCCCACACGACTGGGGTAAAACTCTGAAAGAGATGGATTTAAATCTCTCTTTCGATCTGCGTGTCGAGCCACTGAGTAAATACCATCTTGATGATATTTCCATGCACCGACTGCGTGGCGGCGAAATTGTCGCCCTGGACGATCAGTACACGTTTTTGCAGCGTATCCCGCGCAGCCACTACGTGCTGGCAGTTGGTCCTGTTCCTTATCTTTATTATCTCCATCAGATGCGATTGCTGGATATCGCCCTGATCGCTTTTATTGCTATTTCCCTCGCCTTTCCGGTGTTTATCTGGATGCGTCCGCACTGGCAGGATATGTTAAAACTGGAAGCAGCGGCGCAACGATTTGGCGATGGGCATCTCAATGAACGTATCCACTTTGATGAGGGTTCGAGCTTTGAACGACTTGGCGTCGCATTTAACCAGATGGCGGACAATATCAACGCCTTAATTGCCAGCAAAAAACAGCTTATTGACGGTATCGCTCACGAACTGCGAACACCGTTAGTGCGCCTGCGTTATCGACTGGAGATGAGCGATAACCTGAGCGCCGCCGAATCCCAGGCGTTGAATCGTGATATCAGTCAACTTGAAGCTTTAATTGAAGAGCTGCTGACTTATGCCCGACTCGATCGCCCACAAAACGAGCTTCATCTTAGCGAACCAGACCTGCCGTTGTGGCTGTCAACGCATCTGGCAGATATTCAGGCAGTAACGCCCGATAAAACGGTACGGATAAAAACGCTCGTGCAAGGCCATTATGCGGCGTTGGATATGCGCTTAATGGAGCGCGTGCTGGATAATTTGCTCAATAACGCCCTGCGGTACTGCCATTCAACGGTTGAAACCAGCCTGCTACTGTCGGGGAATAGAGCGACATTAATTGTTGAGGATGATGGCCCAGGGATTGCCCCAGAAAACCGCGAACATATCTTTGAACCTTTTGTTCGCCTCGATCCCAGCCGGGATCGCTCAACCGGCGGCTGCGGGCTGGGGCTGGCAATTGTCCACTCTATAGCACTGGCAATGGGCGGTACGGTTAATTGTGACACCAGCGAACTGGGTGGTGCCCGCTTCTCGTTTAGCTGGCCGTTATGGCATAACATCCCGCAATTTACCTCTGCCTGA", - "dna_sequence_length": 1302, - "functions": [ - "sensory histidine kinase of RstAB two-component system" - ], - "id": "CDS_1598", - "location": [ - [ - "NC_000913", - 1682882, - "+", - 1302 - ] - ], - "md5": "929d7cd28505474e3c5321c5e74009b5", - "parent_gene": "", - "protein_md5": "67127f59391dbff93f94f064d696ee07", - "protein_translation": "MKKLFIQFYLLLFVCFLVMSLLVGLVYKFTAERAGKQSLDDLMNSSLYLMRSELREIPPHDWGKTLKEMDLNLSFDLRVEPLSKYHLDDISMHRLRGGEIVALDDQYTFLQRIPRSHYVLAVGPVPYLYYLHQMRLLDIALIAFIAISLAFPVFIWMRPHWQDMLKLEAAAQRFGDGHLNERIHFDEGSSFERLGVAFNQMADNINALIASKKQLIDGIAHELRTPLVRLRYRLEMSDNLSAAESQALNRDISQLEALIEELLTYARLDRPQNELHLSEPDLPLWLSTHLADIQAVTPDKTVRIKTLVQGHYAALDMRLMERVLDNLLNNALRYCHSTVETSLLLSGNRATLIVEDDGPGIAPENREHIFEPFVRLDPSRDRSTGGCGLGLAIVHSIALAMGGTVNCDTSELGGARFSFSWPLWHNIPQFTSA", - "protein_translation_length": 433, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tau" - ], - [ - "gene_synonym", - "EcoGene:EG11038" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16525" - ], - [ - "gene_synonym", - "tus" - ], - [ - "gene_synonym", - "JW1602" - ], - [ - "gene_synonym", - "b1610" - ], - [ - "gene_synonym", - "GeneID:945135" - ], - [ - "gene_synonym", - "ECK1605" - ], - [ - "gene_synonym", - "GI:16129568" - ], - [ - "gene_synonym", - "NP_416127.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0005378" - ] - ], - "dna_sequence": "ATGGCGCGTTACGATCTCGTAGACCGACTCAACACTACCTTTCGCCAGATGGAACAAGAGCTGGCTATATTTGCCGCTCATCTTGAGCAACACAAGCTATTGGTTGCCCGCGTGTTCTCTTTGCCGGAGGTAAAAAAAGAGGATGAGCATAATCCGCTTAATCGTATTGAGGTAAAACAACATCTCGGCAACGACGCGCAGTCGCTGGCGTTGCGTCATTTCCGCCATTTATTTATTCAACAACAGTCCGAAAATCGCAGCAGCAAGGCCGCTGTCCGTCTGCCTGGCGTGTTGTGTTACCAGGTCGATAACCTTTCGCAAGCAGCGTTGGTCAGTCATATTCAGCACATCAATAAACTCAAGACCACGTTCGAGCATATCGTCACGGTTGAATCAGAACTCCCCACCGCGGCACGTTTTGAATGGGTGCATCGTCATTTGCCGGGGCTGATCACCCTTAATGCTTACCGCACGCTCACCGTTCTGCACGACCCCGCCACTTTACGCTTTGGTTGGGCTAATAAACATATCATTAAGAATTTACATCGTGATGAAGTCCTGGCACAGCTGGAAAAAAGCCTGAAATCACCACGCAGTGTCGCACCGTGGACGCGCGAGGAGTGGCAAAGAAAACTGGAGCGAGAGTATCAGGATATCGCTGCCCTGCCACAGAACGCGAAGTTAAAAATCAAACGTCCGGTGAAGGTGCAGCCGATTGCCCGCGTCTGGTACAAAGGAGATCAAAAACAAGTCCAACACGCCTGCCCTACACCACTGATTGCACTGATTAATCGGGATAATGGCGCGGGCGTGCCGGACGTTGGTGAGTTGTTAAATTACGATGCCGACAATGTGCAGCACCGTTATAAACCTCAGGCGCAGCCGCTTCGTTTGATCATTCCACGGCTGCACCTGTATGTTGCAGATTAA", - "dna_sequence_length": 930, - "functions": [ - "inhibitor of replication at Ter, DNA-binding protein" - ], - "id": "CDS_1599", - "location": [ - [ - "NC_000913", - 1684259, - "+", - 930 - ] - ], - "md5": "a3a785324053b7e09fb092dbb00fe46a", - "parent_gene": "", - "protein_md5": "ed59bcb1634167857e53e941bd9f3c73", - "protein_translation": "MARYDLVDRLNTTFRQMEQELAIFAAHLEQHKLLVARVFSLPEVKKEDEHNPLNRIEVKQHLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQVDNLSQAALVSHIQHINKLKTTFEHIVTVESELPTAARFEWVHRHLPGLITLNAYRTLTVLHDPATLRFGWANKHIIKNLHRDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQDIAALPQNAKLKIKRPVKVQPIARVWYKGDQKQVQHACPTPLIALINRDNGAGVPDVGELLNYDADNVQHRYKPQAQPLRLIIPRLHLYVAD", - "protein_translation_length": 309, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05042" - ], - [ - "gene_synonym", - "NP_416128.1" - ], - [ - "gene_synonym", - "b1611" - ], - [ - "gene_synonym", - "JW1603" - ], - [ - "gene_synonym", - "fumC" - ], - [ - "gene_synonym", - "ASAP:ABE-0005380" - ], - [ - "gene_synonym", - "GeneID:946147" - ], - [ - "gene_synonym", - "ECK1606" - ], - [ - "gene_synonym", - "GI:16129569" - ], - [ - "gene_synonym", - "EcoGene:EG10358" - ] - ], - "dna_sequence": "ATGAATACAGTACGCAGCGAAAAAGATTCGATGGGGGCGATTGATGTCCCGGCAGATAAGCTGTGGGGCGCACAAACTCAACGCTCGCTGGAGCATTTCCGCATTTCGACGGAGAAAATGCCCACCTCACTGATTCATGCGCTGGCGCTAACCAAGCGTGCAGCGGCAAAAGTTAATGAAGATTTAGGCTTGTTGTCTGAAGAGAAAGCGAGCGCCATTCGTCAGGCGGCGGATGAAGTACTGGCAGGACAGCATGACGACGAATTCCCGCTGGCTATCTGGCAGACCGGCTCCGGCACGCAAAGTAACATGAACATGAACGAAGTGCTGGCTAACCGGGCCAGTGAATTACTCGGCGGTGTGCGCGGGATGGAACGTAAAGTTCACCCTAACGACGACGTGAACAAAAGCCAAAGTTCCAACGATGTCTTTCCGACGGCGATGCACGTTGCGGCGCTGCTGGCGCTGCGCAAGCAACTCATTCCTCAGCTTAAAACCCTGACACAGACACTGAATGAGAAATCCCGTGCTTTTGCCGATATCGTCAAAATTGGTCGTACTCACTTGCAGGATGCCACGCCGTTAACGCTGGGGCAGGAGATTTCCGGCTGGGTAGCGATGCTCGAGCATAATCTCAAACATATCGAATACAGCCTGCCTCACGTAGCGGAACTGGCTCTTGGCGGTACAGCGGTGGGTACTGGACTAAATACCCATCCGGAGTATGCGCGTCGCGTAGCAGATGAACTGGCAGTCATTACCTGTGCACCGTTTGTTACCGCGCCGAACAAATTTGAAGCGCTGGCGACCTGTGATGCCCTGGTTCAGGCGCACGGCGCGTTGAAAGGGTTGGCTGCGTCACTGATGAAAATCGCCAATGATGTCCGCTGGCTGGCCTCTGGCCCGCGCTGCGGAATTGGTGAAATCTCAATCCCGGAAAATGAGCCGGGCAGCTCAATCATGCCGGGGAAAGTGAACCCAACACAGTGTGAGGCATTAACCATGCTCTGCTGTCAGGTGATGGGGAACGACGTGGCGATCAACATGGGGGGCGCTTCCGGTAACTTTGAACTGAACGTCTTCCGTCCAATGGTGATCCACAATTTCCTGCAATCGGTGCGCTTGCTGGCAGATGGCATGGAAAGTTTTAACAAACACTGCGCAGTGGGTATTGAACCGAATCGTGAGCGAATCAATCAATTACTCAATGAATCGCTGATGCTGGTGACTGCGCTTAACACCCACATTGGTTATGACAAAGCCGCCGAGATCGCCAAAAAAGCGCATAAAGAAGGGCTGACCTTAAAAGCTGCGGCCCTTGCGCTGGGGTATCTTAGCGAAGCCGAGTTTGACAGCTGGGTACGGCCAGAACAGATGGTCGGCAGTATGAAAGCCGGGCGTTAA", - "dna_sequence_length": 1404, - "functions": [ - "fumarate hydratase (fumarase C),aerobic Class II" - ], - "id": "CDS_1600", - "location": [ - [ - "NC_000913", - 1686588, - "-", - 1404 - ] - ], - "md5": "49cf8c90e7755068a1398cd2e2e8fc7e", - "parent_gene": "", - "protein_md5": "ba9ea4f2a2bede4d365c5a32e4fd7009", - "protein_translation": "MNTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEFDSWVRPEQMVGSMKAGR", - "protein_translation_length": 467, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946826" - ], - [ - "gene_synonym", - "GI:16129570" - ], - [ - "gene_synonym", - "JW1604" - ], - [ - "gene_synonym", - "NP_416129.1" - ], - [ - "gene_synonym", - "fumA" - ], - [ - "gene_synonym", - "b1612" - ], - [ - "gene_synonym", - "ASAP:ABE-0005392" - ], - [ - "gene_synonym", - "ECK1607" - ], - [ - "gene_synonym", - "EcoGene:EG10356" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC33" - ] - ], - "dna_sequence": "ATGTCAAACAAACCCTTTCATTATCAGGCTCCTTTTCCACTCAAAAAAGATGATACTGAGTATTACCTGCTAACCAGCGAACACGTTAGCGTATCTGAATTTGAAGGGCAGGAGATTTTGAAAGTCGCACCCGAAGCGTTAACTCTGTTGGCGCGCCAGGCGTTTCATGATGCGTCGTTCATGCTGCGTCCGGCGCACCAACAACAGGTGGCCGACATTCTGCGTGACCCGGAGGCCAGCGAAAATGATAAATATGTGGCGCTGCAATTCCTGCGTAACTCCGACATCGCGGCGAAAGGCGTTCTGCCAACCTGTCAGGATACCGGCACCGCGATTATTGTTGGTAAAAAAGGGCAGCGTGTATGGACCGGTGGTGGTGATGAAGCGGCGCTGGCGCGCGGTGTCTATAACACTTATATCGAAGATAATCTGCGCTACTCGCAAAACGCGCCGCTGGATATGTATAAAGAAGTGAATACCGGCACCAATCTGCCAGCGCAGATCGATCTTTATGCCGTTGATGGCGACGAATACAAATTCCTCTGTATCGCCAAAGGTGGTGGTTCGGCAAACAAGACGTATCTCTATCAGGAAACCAAAGCGTTACTGACGCCGGGGAAACTGAAAAATTACCTGGTTGAGAAGATGCGCACGCTGGGTACGGCGGCCTGTCCTCCGTATCATATTGCGTTCGTTATTGGTGGAACTTCTGCAGAAACGAACCTTAAAACGGTGAAACTGGCTTCCGCGAAATACTATGATGAACTGCCAACGGAAGGGAATGAGCACGGTCAGGCGTTCCGCGATGTGGAACTGGAAAAAGAATTGCTGATCGAAGCGCAAAATCTTGGTCTGGGTGCGCAGTTTGGTGGTAAATACTTCGCTCACGACATCCGCGTGATTCGCCTGCCACGTCACGGCGCATCCTGCCCGGTCGGTATGGGCGTCTCCTGCTCTGCTGACCGTAATATCAAAGCGAAGATCAACCGTCAGGGGATCTGGATCGAAAAACTGGAACATAATCCAGGCAAATATATCCCGGAAGAGCTGCGCAAAGCGGGAGAAGGCGAAGCGGTGCGCGTTGACCTTAACCGTCCGATGAAAGAGATCCTCGCACAGTTGTCGCAGTATCCCGTTTCTACACGCTTATCGCTTAACGGCACGATTATCGTCGGTCGTGATATTGCTCACGCCAAACTGAAAGAGCGGATGGATAACGGTGAAGGGCTGCCGCAGTACATCAAAGATCATCCGATTTACTACGCGGGTCCGGCCAAAACGCCGGAAGGTTATGCCTCCGGTTCTCTTGGCCCAACGACCGCCGGACGGATGGATTCTTATGTCGATCAACTGCAAGCGCAGGGCGGAAGTATGATCATGCTGGCGAAAGGCAACCGCAGCCAGCAGGTGACGGATGCCTGTAAAAAACACGGCGGCTTCTACCTTGGCAGTATCGGTGGTCCGGCCGCTGTATTGGCGCAGGGAAGTATTAAGAGCCTGGAATGTGTTGAATATCCGGAACTGGGAATGGAAGCCATCTGGAAAATTGAAGTGGAAGATTTCCCGGCGTTTATCCTTGTGGATGATAAAGGAAATGACTTCTTCCAGCAGATACAACTCACACAATGCACCCGCTGTGTGAAATAA", - "dna_sequence_length": 1647, - "functions": [ - "fumarate hydratase (fumarase A), aerobic Class I" - ], - "id": "CDS_1601", - "location": [ - [ - "NC_000913", - 1688377, - "-", - 1647 - ] - ], - "md5": "8d1c5caf0ec982e11511d32274ceb34d", - "parent_gene": "", - "protein_md5": "de6f60430b310db5b498f9c0d4a4d943", - "protein_translation": "MSNKPFHYQAPFPLKKDDTEYYLLTSEHVSVSEFEGQEILKVAPEALTLLARQAFHDASFMLRPAHQQQVADILRDPEASENDKYVALQFLRNSDIAAKGVLPTCQDTGTAIIVGKKGQRVWTGGGDEAALARGVYNTYIEDNLRYSQNAPLDMYKEVNTGTNLPAQIDLYAVDGDEYKFLCIAKGGGSANKTYLYQETKALLTPGKLKNYLVEKMRTLGTAACPPYHIAFVIGGTSAETNLKTVKLASAKYYDELPTEGNEHGQAFRDVELEKELLIEAQNLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINRQGIWIEKLEHNPGKYIPEELRKAGEGEAVRVDLNRPMKEILAQLSQYPVSTRLSLNGTIIVGRDIAHAKLKERMDNGEGLPQYIKDHPIYYAGPAKTPEGYASGSLGPTTAGRMDSYVDQLQAQGGSMIMLAKGNRSQQVTDACKKHGGFYLGSIGGPAAVLAQGSIKSLECVEYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIQLTQCTRCVK", - "protein_translation_length": 548, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00946" - ], - [ - "gene_synonym", - "EcoGene:EG10566" - ], - [ - "gene_synonym", - "GI:49176125" - ], - [ - "gene_synonym", - "JW1605" - ], - [ - "gene_synonym", - "GeneID:944840" - ], - [ - "gene_synonym", - "b1613" - ], - [ - "gene_synonym", - "pmi" - ], - [ - "gene_synonym", - "manA" - ], - [ - "gene_synonym", - "NP_416130.3" - ], - [ - "gene_synonym", - "ASAP:ABE-0005398" - ], - [ - "gene_synonym", - "ECK1608" - ] - ], - "dna_sequence": "ATGCAAAAACTCATTAACTCAGTGCAAAACTATGCCTGGGGCAGCAAAACGGCGTTGACTGAACTTTATGGTATGGAAAATCCGTCCAGCCAGCCGATGGCCGAGCTGTGGATGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACTGCGTGATGTGATTGAGAGTGATAAATCGACTCTGCTCGGAGAGGCCGTTGCCAAACGCTTTGGCGAACTGCCTTTCCTGTTCAAAGTATTATGCGCAGCACAGCCACTCTCCATTCAGGTTCATCCAAACAAACACAATTCTGAAATCGGTTTTGCCAAAGAAAATGCCGCAGGTATCCCGATGGATGCCGCCGAGCGTAACTATAAAGATCCTAACCACAAGCCGGAGCTGGTTTTTGCGCTGACGCCTTTCCTTGCGATGAACGCGTTTCGTGAATTTTCCGAGATTGTCTCCCTACTCCAGCCGGTCGCAGGTGCACATCCGGCGATTGCTCACTTTTTACAACAGCCTGATGCCGAACGTTTAAGCGAACTGTTCGCCAGCCTGTTGAATATGCAGGGTGAAGAAAAATCCCGCGCGCTGGCGATTTTAAAATCGGCCCTCGATAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTCGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGCCAAACCGGCTAACCAGTTGTTGACCCAGCCGGTGAAACAAGGTGCAGAACTGGACTTCCCGATTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGCCAGCAGAGTGCCGCCATTTTGTTCTGCGTCGAAGGCGATGCAACGTTGTGGAAAGGTTCTCAGCAGTTACAGCTTAAACCGGGTGAATCAGCGTTTATTGCCGCCAACGAATCACCGGTGACTGTCAAAGGCCACGGCCGTTTAGCGCGTGTTTACAACAAGCTGTAA", - "dna_sequence_length": 1176, - "functions": [ - "mannose-6-phosphate isomerase" - ], - "id": "CDS_1602", - "location": [ - [ - "NC_000913", - 1688576, - "+", - 1176 - ] - ], - "md5": "5cb937ad6cf1862a4b0e92db990c1a2a", - "parent_gene": "", - "protein_md5": "db79e4dbecd21e0c3a7736850a23e810", - "protein_translation": "MQKLINSVQNYAWGSKTALTELYGMENPSSQPMAELWMGAHPKSSSRVQNAAGDIVSLRDVIESDKSTLLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPNKHNSEIGFAKENAAGIPMDAAERNYKDPNHKPELVFALTPFLAMNAFREFSEIVSLLQPVAGAHPAIAHFLQQPDAERLSELFASLLNMQGEEKSRALAILKSALDSQQGEPWQTIRLISEFYPEDSGLFSPLLLNVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAGLTPKYIDIPELVANVKFEAKPANQLLTQPVKQGAELDFPIPVDDFAFSLHDLSDKETTISQQSAAILFCVEGDATLWKGSQQLQLKPGESAFIAANESPVTVKGHGRLARVYNKL", - "protein_translation_length": 391, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946172" - ], - [ - "gene_synonym", - "ASAP:ABE-0005402" - ], - [ - "gene_synonym", - "NP_416131.1" - ], - [ - "gene_synonym", - "JW1606" - ], - [ - "gene_synonym", - "b1614" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77804" - ], - [ - "gene_synonym", - "GI:16129572" - ], - [ - "gene_synonym", - "EcoGene:EG12457" - ], - [ - "gene_synonym", - "ydgA" - ], - [ - "gene_synonym", - "ECK1609" - ] - ], - "dna_sequence": "ATGAATAAATCGCTGGTAGCGGTAGGCGTCATTGTTGCGCTAGGCGTAGTCTGGACAGGCGGCGCATGGTATACAGGCAAGAAGATTGAAACCCATCTCGAAGACATGGTCGCGCAGGCGAACGCGCAACTCAAACTGACAGCTCCTGAATCCAACCTGGAAGTGAGTTATCAAAACTATCATCGCGGCGTATTCAGCAGCCAGTTGCAACTGTTGGTGAAACCCATTGCCGGGAAAGAAAATCCGTGGATTAAAAGCGGTCAGAGCGTCATCTTCAACGAATCGGTTGATCATGGTCCCTTCCCGCTTGCCCAGCTTAAAAAACTGAACCTGATCCCGTCGATGGCATCAATTCAAACCACGCTGGTTAATAACGAAGTAAGCAAACCACTGTTTGATATGGCAAAAGGTGAAACGCCTTTTGAGATTAACTCGCGCATTGGTTACAGCGGTGATTCCAGTTCCGATATTTCGCTCAAGCCACTGAATTACGAGCAAAAGGATGAAAAAGTCGCCTTTAGCGGCGGCGAGTTCCAGTTAAATGCTGACAGAGACGGCAAAGCCATCTCCCTTTCCGGGGAGGCGCAAAGTGGTCGGATAGACGCAGTTAACGAATACAACCAGAAAGTGCAGTTGACCTTTAATAATCTGAAAACCGACGGTTCCAGCACGCTGGCAAGTTTTGGTGAGCGTGTAGGAAATCAAAAACTGTCACTGGAAAAAATGACCATTTCAGTGGAAGGCAAAGAACTGGCACTGCTGGAAGGCATGGAGATCAGCGGTAAATCGGATCTGGTCAATGACGGTAAAACGATCAATAGCCAACTGGATTACTCGCTAAACAGCCTGAAGGTACAGAATCAGGATCTGGGCAGCGGCAAGCTGACTTTAAAAGTCGGCCAGATTGATGGTGAAGCCTGGCATCAGTTTAGCCAGCAATATAACGCGCAAACTCAGGCGCTGCTGGCACAGCCAGAAATTGCCAACAACCCCGAACTTTATCAGGAGAAAGTGACGGAAGCCTTCTTTAGCGCCCTGCCGCTGATGCTGAAAGGCGATCCGGTGATTACTATCGCGCCGCTAAGCTGGAAAAACAGTCAGGGTGAAAGTGCCCTGAATCTGTCGCTGTTCCTGAAAGATCCGGCAACGACTAAAGAAGCGCCGCAAACGCTGGCGCAGGAAGTAGATCGTTCGGTTAAATCTCTGGATGCGAAACTGACCATTCCGGTGGATATGGCAACTGAGTTTATGACTCAGGTAGCGAAGCTGGAAGGTTATCAGGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAATGGGGCAGATGTTCCGTCTGACCACCTTGCAGGACAATACCATCACCACCAGCCTGCAATATGCTAACGGTCAGATAACGTTAAATGGGCAGAAAATGTCGTTAGAAGATTTTGTTGGCATGTTTGCGATGCCAGCTCTTAACGTTCCGGCTGTACCGGCAATTCCGCAGCAGTAA", - "dna_sequence_length": 1509, - "functions": [ - "DUF945 family protein" - ], - "id": "CDS_1603", - "location": [ - [ - "NC_000913", - 1689852, - "+", - 1509 - ] - ], - "md5": "a53996bcd7bdba72d4eaf77d63897ec0", - "parent_gene": "", - "protein_md5": "afca01a8a5abfff6100aea5004d46e3f", - "protein_translation": "MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLKPLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLASFGERVGNQKLSLEKMTISVEGKELALLEGMEISGKSDLVNDGKTINSQLDYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQALLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVKSLDAKLTIPVDMATEFMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYANGQITLNGQKMSLEDFVGMFAMPALNVPAVPAIPQQ", - "protein_translation_length": 502, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005405" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47706" - ], - [ - "gene_synonym", - "b1615" - ], - [ - "gene_synonym", - "JW1607" - ], - [ - "gene_synonym", - "EcoGene:EG12668" - ], - [ - "gene_synonym", - "NP_416132.2" - ], - [ - "gene_synonym", - "GI:90111306" - ], - [ - "gene_synonym", - "ECK1610" - ], - [ - "gene_synonym", - "uidC" - ], - [ - "gene_synonym", - "GeneID:944820" - ], - [ - "gene_synonym", - "gusC" - ] - ], - "dna_sequence": "ATGAGAAAAATAGTGGCCATGGCCGTTATTTGCCTGACGGCTGCCTCTGGCCTTACCTCTGCTTATGCGGCGCAACTGGCTGACGATGAAGCGGGACTACGCATCAGACTGAAAAACGAATTGCGCAGGGCGGATAAGCCCAGTGCTGGCGCGGGAAGAGATATTTACGCATGGGTACAGGGAGGATTGCTCGATTTCAATAGTGGTTATTATTCCAATATTATTGGCGTTGAAGGCGGGGCGTATTATGTTTATAAATTAGGTGCTCGTGCTGATATGAGTACCCGGTGGTATCTTGATGGTGATAAAAGTTTTGGCTTTGCCCTGGGGGCAGTAAAAATAAAACCCAGTGAAAATAGCCTGCTTAAATTAGGTCGCTTCGGGACGGATTATAGTTATGGTAGCTTACCTTATCGTATTCCGTTAATGGCTGGCAGTTCGCAACGTACATTACCGACAGTTTCTGAAGGAGCATTAGGTTATTGGGCTTTAACACCAAATATTGATCTGTGGGGAATGTGGCGTTCACGAGTATTTTTATGGACTGATTCAACAACCGGTATTCGTGATGAAGGGGTGTATAACAGCCAGACGGGAAAATACGATAAACATCGCGCACGTTCTTTTTTAGCCGCCAGTTGGCATGATGATACCAGTCGCTATTCTCTGGGGGCATCGGTACAGAAAGATGTTTCCAATCAGATACAAAGTATTCTCGAGAAAAGCATACCGCTCGACCCGAATTATACGTTGAAAGGGGAGTTGCTCGGCTTTTACGCGCAGCTCGAAGGTTTAAGTCGTAATACCAGCCAGCCCAATGAAACGGCGTTGGTTAGTGGACAATTGACCTGGAATGCGCCGTGGGGAAGTGTATTTGGCAGTGGTGGTTATTTGCGCCATGCAATGAATGGTGCCGTGGTGGATACCGACATTGGCTATCCCTTTTCATTAAGTCTTGATCGTAACCGTGAAGGAATGCAGTCCTGGCAATTGGGCGTCAACTATCGTTTAACGCCGCAATTTACGCTGACATTTGCACCGATTGTGACTCGCGGCTATGAATCCAGTAAACGAGATGTGCGGATTGAAGGCACGGGTATCTTAGGTGGTATGAACTATCGGGTCAGCGAAGGGCCGTTACAAGGGATGAATTTCTTTCTTGCTGCCGATAAAGGGCGGGAAAAGCGCGATGGCAGTACGCTGGGCGATCGCCTGAATTACTGGGATGTGAAAATGAGTATTCAGTATGACTTTATGCTGAAGTAA", - "dna_sequence_length": 1266, - "functions": [ - "putative outer membrane porin for beta-glucuronides porin protein" - ], - "id": "CDS_1604", - "location": [ - [ - "NC_000913", - 1692851, - "-", - 1266 - ] - ], - "md5": "31b5a9c5a588fe1e65aea70083a3269e", - "parent_gene": "", - "protein_md5": "dc8b165e7badb22c0cd706d28f26db24", - "protein_translation": "MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRADKPSAGAGRDIYAWVQGGLLDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGDKSFGFALGAVKIKPSENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALGYWALTPNIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDTSRYSLGASVQKDVSNQIQSILEKSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETALVSGQLTWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVNYRLTPQFTLTFAPIVTRGYESSKRDVRIEGTGILGGMNYRVSEGPLQGMNFFLAADKGREKRDGSTLGDRLNYWDVKMSIQYDFMLK", - "protein_translation_length": 421, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005407" - ], - [ - "gene_synonym", - "JW1608" - ], - [ - "gene_synonym", - "uidP" - ], - [ - "gene_synonym", - "b1616" - ], - [ - "gene_synonym", - "GeneID:947484" - ], - [ - "gene_synonym", - "ECK1611" - ], - [ - "gene_synonym", - "uidB" - ], - [ - "gene_synonym", - "NP_416133.1" - ], - [ - "gene_synonym", - "GI:16129574" - ], - [ - "gene_synonym", - "EcoGene:EG11658" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CE44" - ], - [ - "gene_synonym", - "gusB" - ] - ], - "dna_sequence": "ATGAATCAACAACTCTCCTGGCGCACCATCGTCGGCTACAGCCTCGGTGACGTCGCCAATAACTTCGCCTTCGCAATGGGGGCGCTCTTCCTGTTGAGTTACTACACCGACGTCGCTGGCGTCGGTGCCGCTGCGGCGGGCACCATGCTGTTACTGGTGCGGGTATTCGATGCCTTCGCCGACGTCTTTGCCGGACGAGTGGTGGACAGTGTGAATACCCGCTGGGGAAAATTCCGCCCGTTTTTACTCTTCGGTACTGCGCCGTTAATGATCTTCAGCGTGCTGGTATTCTGGGTGCTGACCGACTGGAGCCATGGTAGCAAAGTGGTGTATGCATATTTGACCTACATGGGCCTCGGGCTTTGCTACAGCCTGGTGAATATTCCTTATGGTTCACTTGCTACCGCGATGACCCAACAACCACAATCCCGCGCCCGTCTGGGCGCGGCTCGTGGGATTGCCGCTTCATTGACCTTTGTCTGCCTGGCATTTCTGATAGGACCGAGCATTAAGAACTCCAGCCCGGAAGAGATGGTGTCGGTATACCATTTCTGGACAATTGTGCTGGCGATTGCCGGAATGGTGCTTTACTTCATCTGCTTCAAATCGACGCGTGAGAATGTGGTACGTATCGTTGCGCAGCCGTCATTGAATATCAGTCTGCAAACCCTGAAACGGAATCGCCCGCTGTTTATGTTGTGCATCGGTGCGCTGTGTGTGCTGATTTCGACCTTTGCGGTCAGCGCCTCGTCGTTGTTCTACGTGCGCTATGTGTTAAATGATACCGGGCTGTTCACTGTGCTGGTACTGGTGCAAAACCTGGTTGGTACTGTGGCATCGGCACCGCTGGTGCCGGGGATGGTCGCGAGGATCGGTAAAAAGAATACCTTCCTGATTGGCGCTTTGCTGGGAACCTGCGGTTATCTGCTGTTCTTCTGGGTTTCCGTCTGGTCACTGCCGGTGGCGTTGGTTGCGTTGGCCATCGCTTCAATTGGTCAGGGCGTTACCATGACCGTGATGTGGGCGCTGGAAGCTGATACCGTAGAATACGGTGAATACCTGACCGGCGTGCGAATTGAAGGGCTCACCTATTCACTATTCTCATTTACCCGTAAATGCGGTCAGGCAATCGGAGGTTCAATTCCTGCCTTTATTTTGGGGTTAAGCGGATATATCGCCAATCAGGTGCAAACGCCGGAAGTTATTATGGGCATCCGCACATCAATTGCCTTAGTACCTTGCGGATTTATGCTACTGGCATTCGTTATTATCTGGTTTTATCCGCTCACGGATAAAAAATTCAAAGAAATCGTGGTTGAAATTGATAATCGTAAAAAAGTGCAGCAGCAATTAATCAGCGATATCACTAATTAA", - "dna_sequence_length": 1374, - "functions": [ - "glucuronide transporter" - ], - "id": "CDS_1605", - "location": [ - [ - "NC_000913", - 1694263, - "-", - 1374 - ] - ], - "md5": "0777bf53df6ff8c46bdc4ef10472e0e9", - "parent_gene": "", - "protein_md5": "7582ee621638d65139cf1e0ea57b5e5a", - "protein_translation": "MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVLTDWSHGSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLNISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDNRKKVQQQLISDITN", - "protein_translation_length": 457, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005410" - ], - [ - "gene_synonym", - "GeneID:946149" - ], - [ - "gene_synonym", - "NP_416134.1" - ], - [ - "gene_synonym", - "JW1609" - ], - [ - "gene_synonym", - "b1617" - ], - [ - "gene_synonym", - "GI:16129575" - ], - [ - "gene_synonym", - "ECK1612" - ], - [ - "gene_synonym", - "gurA" - ], - [ - "gene_synonym", - "uidA" - ], - [ - "gene_synonym", - "EcoGene:EG11055" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05804" - ], - [ - "gene_synonym", - "gusA" - ] - ], - "dna_sequence": "ATGTTACGTCCTGTAGAAACCCCAACCCGTGAAATCAAAAAACTCGACGGCCTGTGGGCATTCAGTCTGGATCGCGAAAACTGTGGAATTGATCAGCGTTGGTGGGAAAGCGCGTTACAAGAAAGCCGGGCAATTGCTGTGCCAGGCAGTTTTAACGATCAGTTCGCCGATGCAGATATTCGTAATTATGCGGGCAACGTCTGGTATCAGCGCGAAGTCTTTATACCGAAAGGTTGGGCAGGCCAGCGTATCGTGCTGCGTTTCGATGCGGTCACTCATTACGGCAAAGTGTGGGTCAATAATCAGGAAGTGATGGAGCATCAGGGCGGCTATACGCCATTTGAAGCCGATGTCACGCCGTATGTTATTGCCGGGAAAAGTGTACGTATCACCGTTTGTGTGAACAACGAACTGAACTGGCAGACTATCCCGCCGGGAATGGTGATTACCGACGAAAACGGCAAGAAAAAGCAGTCTTACTTCCATGATTTCTTTAACTATGCCGGGATCCATCGCAGCGTAATGCTCTACACCACGCCGAACACCTGGGTGGACGATATCACCGTGGTGACGCATGTCGCGCAAGACTGTAACCACGCGTCTGTTGACTGGCAGGTGGTGGCCAATGGTGATGTCAGCGTTGAACTGCGTGATGCGGATCAACAGGTGGTTGCAACTGGACAAGGCACTAGCGGGACTTTGCAAGTGGTGAATCCGCACCTCTGGCAACCGGGTGAAGGTTATCTCTATGAACTGTGCGTCACAGCCAAAAGCCAGACAGAGTGTGATATCTACCCGCTTCGCGTCGGCATCCGGTCAGTGGCAGTGAAGGGCGAACAGTTCCTGATTAACCACAAACCGTTCTACTTTACTGGCTTTGGTCGTCATGAAGATGCGGACTTGCGTGGCAAAGGATTCGATAACGTGCTGATGGTGCACGACCACGCATTAATGGACTGGATTGGGGCCAACTCCTACCGTACCTCGCATTACCCTTACGCTGAAGAGATGCTCGACTGGGCAGATGAACATGGCATCGTGGTGATTGATGAAACTGCTGCTGTCGGCTTTAACCTCTCTTTAGGCATTGGTTTCGAAGCGGGCAACAAGCCGAAAGAACTGTACAGCGAAGAGGCAGTCAACGGGGAAACTCAGCAAGCGCACTTACAGGCGATTAAAGAGCTGATAGCGCGTGACAAAAACCACCCAAGCGTGGTGATGTGGAGTATTGCCAACGAACCGGATACCCGTCCGCAAGGTGCACGGGAATATTTCGCGCCACTGGCGGAAGCAACGCGTAAACTCGACCCGACGCGTCCGATCACCTGCGTCAATGTAATGTTCTGCGACGCTCACACCGATACCATCAGCGATCTCTTTGATGTGCTGTGCCTGAACCGTTATTACGGATGGTATGTCCAAAGCGGCGATTTGGAAACGGCAGAGAAGGTACTGGAAAAAGAACTTCTGGCCTGGCAGGAGAAACTGCATCAGCCGATTATCATCACCGAATACGGCGTGGATACGTTAGCCGGGCTGCACTCAATGTACACCGACATGTGGAGTGAAGAGTATCAGTGTGCATGGCTGGATATGTATCACCGCGTCTTTGATCGCGTCAGCGCCGTCGTCGGTGAACAGGTATGGAATTTCGCCGATTTTGCGACCTCGCAAGGCATATTGCGCGTTGGCGGTAACAAGAAAGGGATCTTCACTCGCGACCGCAAACCGAAGTCGGCGGCTTTTCTGCTGCAAAAACGCTGGACTGGCATGAACTTCGGTGAAAAACCGCAGCAGGGAGGCAAACAATGA", 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"gene_synonym", - "ASAP:ABE-0005415" - ], - [ - "gene_synonym", - "NP_416135.1" - ], - [ - "gene_synonym", - "uidR" - ], - [ - "gene_synonym", - "b1618" - ], - [ - "gene_synonym", - "GeneID:946150" - ], - [ - "gene_synonym", - "JW1610" - ], - [ - "gene_synonym", - "gusR" - ], - [ - "gene_synonym", - "ECK1613" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACT6" - ], - [ - "gene_synonym", - "GI:16129576" - ], - [ - "gene_synonym", - "EcoGene:EG12667" - ] - ], - "dna_sequence": "ATGATGGATAACATGCAGACTGAAGCACAACCGACACGGACCCGGATCCTCAATGCTGCCAGAGAGATTTTTTCAGAAAATGGATTTCACAGTGCCTCGATGAAAGCCATCTGTAAATCTTGCGCCATTAGTCCCGGGACGCTCTATCACCATTTCATCTCCAAAGAAGCCTTGATTCAGGCGATTATCTTACAGGACCAGGAGAGGGCGCTGGCCCGTTTCCGGGAACCGATTGAAGGGATTCATTTCGTTGACTATATGGTCGAGTCCATTGTCTCTCTCACCCATGAAGCCTTTGGACAACGGGCGCTGGTGGTTGAAATTATGGCGGAAGGGATGCGTAACCCACAGGTCGCCGCCATGCTTAAAAATAAGCATATGACGATCACGGAATTTGTTGCCCAGCGGATGCGTGATGCCCAGCAAAAAGGCGAGATAAGCCCAGACATCAACACGGCAATGACTTCACGTTTACTGCTGGATCTGACCTACGGTGTACTGGCCGATATCGAAGCGGAAGACCTGGCGCGTGAAGCGTCGTTTGCTCAGGGATTACGCGCGATGATTGGCGGTATCTTAACCGCATCCTGA", - "dna_sequence_length": 591, - "functions": [ - "transcriptional repressor" - ], - "id": "CDS_1607", - "location": [ - [ - "NC_000913", - 1697052, - "-", - 591 - ] - ], - "md5": "7bc75c7d88a11d04d41656d5aadcbfed", - "parent_gene": "", - "protein_md5": "b2c1e30af19fa40e5767bc8668149a38", - "protein_translation": "MMDNMQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYHHFISKEALIQAIILQDQERALARFREPIEGIHFVDYMVESIVSLTHEAFGQRALVVEIMAEGMRNPQVAAMLKNKHMTITEFVAQRMRDAQQKGEISPDINTAMTSRLLLDLTYGVLADIEAEDLAREASFAQGLRAMIGGILTAS", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hsdH" - ], - [ - "gene_synonym", - "b1619" - ], - [ - "gene_synonym", - "hsd" - ], - [ - "gene_synonym", - "EcoGene:EG10425" - ], - [ - "gene_synonym", - "JW1611" - ], - [ - "gene_synonym", - "ASAP:ABE-0005419" - ], - [ - "gene_synonym", - "hdhA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AET8" - ], - [ - "gene_synonym", - "NP_416136.1" - ], - [ - "gene_synonym", - "GI:16129577" - ], - [ - "gene_synonym", - "ECK1614" - ], - [ - "gene_synonym", - "GeneID:946151" - ] - ], - "dna_sequence": "GTGTTTAATTCTGACAACCTGAGACTCGACGGAAAATGCGCCATCATCACAGGTGCGGGTGCAGGTATTGGTAAAGAAATCGCCATTACATTCGCGACAGCTGGCGCATCTGTGGTGGTCAGTGATATTAACGCCGACGCAGCTAACCATGTTGTAGACGAAATTCAACAACTGGGTGGTCAGGCATTTGCCTGCCGTTGTGATATTACTTCCGAACAGGAACTCTCTGCACTGGCAGACTTTGCTATCAGTAAGCTGGGTAAAGTTGATATTCTGGTTAACAACGCCGGTGGCGGTGGACCTAAACCGTTTGATATGCCAATGGCGGATTTTCGCCGTGCTTATGAACTGAATGTGTTTTCTTTTTTCCATCTGTCACAACTTGTTGCGCCAGAAATGGAAAAAAATGGCGGTGGCGTTATTCTGACCATCACTTCTATGGCGGCAGAAAATAAAAATATAAACATGACTTCCTATGCATCATCTAAAGCTGCGGCCAGTCATCTGGTCAGAAATATGGCGTTTGACCTGGGTGAAAAAAATATTCGGGTAAATGGCATTGCGCCGGGGGCAATATTAACCGATGCCCTGAAATCCGTTATTACACCAGAAATTGAACAAAAAATGTTACAGCACACGCCGATCAGACGTCTGGGCCAACCGCAAGATATTGCTAACGCAGCGCTGTTCCTTTGCTCGCCTGCTGCGAGCTGGGTAAGCGGACAAATTCTCACCGTCTCCGGTGGTGGGGTACAGGAGCTCAATTAA", - "dna_sequence_length": 768, - "functions": [ - "7-alpha-hydroxysteroid dehydrogenase, NAD-dependent" - ], - "id": "CDS_1608", - "location": [ - [ - "NC_000913", - 1698040, - "-", - 768 - ] - ], - "md5": "ceb8151f93d873b228003dcd718103ef", - "parent_gene": "", - "protein_md5": "83d458c1eb11cb0d156ba66b398fdfab", - "protein_translation": "MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQELN", - "protein_translation_length": 255, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947104" - ], - [ - "gene_synonym", - "EcoGene:EG10557" - ], - [ - "gene_synonym", - "malI" - ], - [ - "gene_synonym", - "ASAP:ABE-0005421" - ], - [ - "gene_synonym", - "JW1612" - ], - [ - "gene_synonym", - "NP_416137.1" - ], - [ - "gene_synonym", - "b1620" - ], - [ - "gene_synonym", - "ECK1615" - ], - [ - "gene_synonym", - "GI:16129578" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P18811" - ] - ], - "dna_sequence": "ATGGCTACCGCCAAAAAAATAACCATTCATGATGTTGCGCTGGCTGCGGGCGTGTCGGTAAGTACCGTTTCGCTGGTGCTTAGTGGCAAAGGGCGAATCTCTACCGCCACAGGAGAACGCGTTAACGCCGCCATTGAAGAGCTGGGATTTGTGCGCAATCGCCAGGCGTCGGCGCTGCGCGGCGGGCAAAGCGGCGTCATTGGTTTGATCGTCCGTGATTTATCTGCGCCGTTTTACGCCGAATTGACGGCCGGATTGACGGAAGCTCTGGAAGCGCAGGGACGGATGGTTTTTTTGCTTCACGGCGGTAAAGACGGTGAGCAGCTGGCACAGCGGTTTTCACTGTTACTGAATCAGGGTGTCGATGGTGTGGTAATTGCCGGAGCTGCAGGAAGTAGCGATGACCTGCGACGGATGGCAGAAGAAAAAGCTATCCCGGTGATTTTCGCTTCCCGTGCCAGTTATCTTGATGATGTTGATACGGTTCGCCCGGACAACATGCAGGCTGCACAGTTGTTGACGGAGCATCTCATTCGCAATGGGCATCAGCGGATCGCCTGGCTGGGAGGGCAAAGTTCCTCATTAACCCGTGCAGAACGGGTTGGGGGCTATTGTGCAACTCTACTAAAATTTGGCCTGCCGTTTCATAGCGATTGGGTGTTGGAGTGCACTTCCAGCCAGAAGCAAGCCGCGGAAGCTATCACGGCGCTTTTACGTCATAACCCGACCATCAGTGCCGTGGTTTGCTATAACGAAACTATTGCGATGGGGGCATGGTTTGGTTTGCTCAAAGCAGGGCGGCAAAGCGGGGAAAGCGGAGTCGATCGTTACTTTGAGCAACAGGTTTCGCTGGCGGCATTTACCGATGCGACACCAACCACACTTGATGATATACCTGTTACCTGGGCCAGCACGCCAGCGCGGGAACTTGGTATCACACTTGCGGATCGCATGATGCAAAAAATCACCCATGAAGAGACGCATTCACGCAATCTTATTATTCCCGCCCGGCTCATTGCAGCGAAATAA", - "dna_sequence_length": 1029, - "functions": [ - "transcriptional repressor of Mal regulon" - ], - "id": "CDS_1609", - "location": [ - [ - "NC_000913", - 1699180, - "-", - 1029 - ] - ], - "md5": "d7263c9c865ca3505b3990a6154e7f6c", - "parent_gene": "", - "protein_md5": "be648286af472ff8f3c164034187c47e", - "protein_translation": "MATAKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNAAIEELGFVRNRQASALRGGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHGGKDGEQLAQRFSLLLNQGVDGVVIAGAAGSSDDLRRMAEEKAIPVIFASRASYLDDVDTVRPDNMQAAQLLTEHLIRNGHQRIAWLGGQSSSLTRAERVGGYCATLLKFGLPFHSDWVLECTSSQKQAAEAITALLRHNPTISAVVCYNETIAMGAWFGLLKAGRQSGESGVDRYFEQQVSLAAFTDATPTTLDDIPVTWASTPARELGITLADRMMQKITHEETHSRNLIIPARLIAAK", - "protein_translation_length": 342, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946009" - ], - [ - "gene_synonym", - "ASAP:ABE-0005429" - ], - [ - "gene_synonym", - "malX" - ], - [ - "gene_synonym", - "JW1613" - ], - [ - "gene_synonym", - "NP_416138.1" - ], - [ - "gene_synonym", - "ECK1616" - ], - [ - "gene_synonym", - "b1621" - ], - [ - "gene_synonym", - "EcoGene:EG10563" - ], - [ - "gene_synonym", - "GI:16129579" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P19642" - ] - ], - "dna_sequence": "ATGACGGCGAAAACAGCACCGAAAGTCACGCTGTGGGAGTTCTTCCAGCAGTTAGGCAAAACCTTCATGTTACCCGTGGCATTATTGTCGTTCTGCGGCATTATGCTCGGCATTGGTAGTTCTCTTAGCAGCCATGATGTCATAACCCTGATCCCGGTCCTGGGCAACCCCGTGTTGCAGGCTATCTTTACCTGGATGAGTAAGATTGGCTCGTTTGCTTTTAGTTTCCTGCCTGTCATGTTCTGTATCGCCATCCCGCTGGGCCTGGCACGCGAAAATAAAGGCGTAGCGGCATTCGCTGGCTTCATCGGTTATGCGGTAATGAACCTCGCGGTAAACTTCTGGTTGACCAATAAAGGCATTCTGCCAACCACGGATGCCGCGGTTCTGAAAGCCAATAACATCCAGAGCATTCTTGGGATCCAGTCGATCGATACCGGGATCCTCGGTGCGGTGATCGCCGGTATTATCGTCTGGATGCTGCATGAGCGTTTCCATAATATCCGCCTGCCGGATGCGCTGGCATTCTTCGGCGGTACGCGCTTCGTACCAATTATCTCCTCGCTGGTGATGGGCCTTGTCGGCCTGGTGATTCCATTAGTCTGGCCGATTTTCGCCATGGGTATTAGCGGCTTGGGCCATATGATAAACAGCGCGGGTGATTTCGGACCGATGCTGTTTGGTACCGGTGAACGTCTGCTGTTGCCGTTTGGTCTGCATCACATTCTGGTGGCATTAATTCGCTTTACCGACGCAGGCGGCACGCAGGAAGTCTGCGGTCAAACCGTCAGCGGCGCACTGACCATCTTCCAGGCGCAATTGAGTTGCCCGACCACTCACGGTTTTTCTGAAAGCGCCACGCGTTTCCTTTCGCAAGGTAAAATGCCTGCGTTTCTCGGCGGTCTGCCAGGTGCAGCGTTAGCTATGTATCACTGCGCGCGCCCGGAAAATCGCCATAAAATTAAAGGTCTGCTGATTTCTGGCCTGATCGCCTGCGTCGTTGGCGGCACTACCGAACCGCTGGAATTCCTGTTCCTGTTCGTAGCGCCAGTTCTGTATGTCATCCACGCGCTGTTAACCGGCCTCGGCTTCACCGTCATGTCTGTGCTCGGCGTCACCATCGGTAATACCGACGGCAATATCATCGACTTCGTGGTGTTCGGTATTTTGCATGGTCTGTCAACCAAGTGGTACATGGTGCCAGTGGTGGCGGCAATCTGGTTTGTCGTTTACTACGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGTTGCCAGCTCAATCGAAAAAGCCGTTGCCGGTGCGCCGGGTAAATCAGGTTACAACGTTCCTGCAATCCTCGAAGCATTAGGCGGTGCCGACAATATTGTCAGCCTCGATAACTGCATTACCCGTCTGCGTTTGTCTGTGAAAGATATGTCGCTTGTTAATGTGCAGGCACTGAAGGACAATCGGGCAATTGGCGTAGTACAACTTAATCAACATAACCTGCAGGTTGTTATCGGGCCACAAGTTCAGTCAGTAAAAGATGAAATGGCCGGTCTGATGCATACTGTCCAGGCATAA", - "dna_sequence_length": 1593, - "functions": [ - "maltose and glucose-specific PTS enzyme IIB component and IIC component" - ], - "id": "CDS_1610", - "location": [ - [ - "NC_000913", - 1699355, - "+", - 1593 - ] - ], - "md5": "038591714b97700b72b94e54c2c611c9", - "parent_gene": "", - "protein_md5": "afd3eb819942c977bb330b327dde2fa5", - "protein_translation": "MTAKTAPKVTLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSSHDVITLIPVLGNPVLQAIFTWMSKIGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGFIGYAVMNLAVNFWLTNKGILPTTDAAVLKANNIQSILGIQSIDTGILGAVIAGIIVWMLHERFHNIRLPDALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINSAGDFGPMLFGTGERLLLPFGLHHILVALIRFTDAGGTQEVCGQTVSGALTIFQAQLSCPTTHGFSESATRFLSQGKMPAFLGGLPGAALAMYHCARPENRHKIKGLLISGLIACVVGGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNTDGNIIDFVVFGILHGLSTKWYMVPVVAAIWFVVYYVIFRFAITRFNLKTPGRDSEVASSIEKAVAGAPGKSGYNVPAILEALGGADNIVSLDNCITRLRLSVKDMSLVNVQALKDNRAIGVVQLNQHNLQVVIGPQVQSVKDEMAGLMHTVQA", - "protein_translation_length": 530, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "malY" - ], - [ - "gene_synonym", - "ASAP:ABE-0005432" - ], - [ - "gene_synonym", - "JW1614" - ], - [ - "gene_synonym", - "EcoGene:EG10564" - ], - [ - "gene_synonym", - "GeneID:945937" - ], - [ - "gene_synonym", - "ECK1617" - ], - [ - "gene_synonym", - "b1622" - ], - [ - "gene_synonym", - "NP_416139.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23256" - ], - [ - "gene_synonym", - "GI:16129580" - ] - ], - "dna_sequence": "ATGTTCGATTTTTCAAAGGTCGTGGATCGTCATGGCACATGGTGTACACAGTGGGATTATGTCGCTGACCGTTTCGGCACTGCTGACCTGTTACCGTTCACGATTTCAGACATGGATTTTGCCACTGCCCCCTGCATTATCGAGGCGCTGAATCAGCGCCTGATGCACGGCGTATTTGGCTACAGCCGCTGGAAAAACGATGAGTTTCTCGCGGCTATTGCCCACTGGTTTTCCACCCAGCATTACACCGCCATCGATTCTCAGACGGTGGTGTATGGCCCTTCTGTCATCTATATGGTTTCAGAACTGATTCGTCAGTGGTCTGAAACAGGTGAAGGCGTGGTGATCCACACACCCGCCTATGACGCATTTTACAAGGCCATTGAAGGTAACCAGCGCACAGTAATGCCCGTTGCTTTAGAGAAGCAGGCTGATGGTTGGTTTTGCGATATGGGCAAGTTGGAAGCCGTGTTGGCGAAACCAGAATGTAAAATTATGCTCCTGTGTAGCCCACAGAATCCTACCGGGAAAGTGTGGACGTGCGATGAGCTGGAGATCATGGCTGACCTGTGCGAGCGTCATGGTGTGCGGGTTATTTCCGATGAAATCCATATGGATATGGTTTGGGGCGAGCAGCCGCATATTCCCTGGAGTAATGTGGCTCGCGGAGACTGGGCGTTGCTAACGTCGGGCTCGAAAAGTTTCAATATTCCCGCCCTGACCGGTGCTTACGGGATTATAGAAAATAGCAGTAGCCGCGATGCCTATTTATCGGCACTGAAAGGCCGTGATGGGCTTTCTTCCCCTTCGGTACTGGCGTTAACTGCCCATATCGCCGCCTATCAGCAAGGCGCGCCGTGGCTGGATGCCTTACGCATCTATCTGAAAGATAACCTGACGTATATCGCAGATAAAATGAACGCCGCGTTTCCTGAACTCAACTGGCAGATCCCACAATCCACTTATCTGGCATGGCTTGATTTACGTCCGTTGAATATTGACGACAACGCGTTGCAAAAAGCACTTATCGAACAAGAAAAAGTCGCGATCATGCCGGGGTATACCTACGGTGAAGAAGGTCGTGGTTTTGTCCGTCTCAATGCCGGCTGCCCACGTTCGAAACTGGAAAAAGGTGTGGCTGGATTAATTAACGCCATCCGCGCTGTTCGTTAA", - "dna_sequence_length": 1173, - "functions": [ - "PLP-dependent beta-cystathionase and maltose regulon regulator" - ], - "id": "CDS_1611", - "location": [ - [ - "NC_000913", - 1700957, - "+", - 1173 - ] - ], - "md5": "c68c90a802111f0abf9f4349eeae1f1f", - "parent_gene": "", - "protein_md5": "db01e3168339eccf89562d127e8aba85", - "protein_translation": "MFDFSKVVDRHGTWCTQWDYVADRFGTADLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR", - "protein_translation_length": 390, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P22333" - ], - [ - "gene_synonym", - "GeneID:945851" - ], - [ - "gene_synonym", - "JW1615" - ], - [ - "gene_synonym", - "b1623" - ], - [ - "gene_synonym", - "ASAP:ABE-0005435" - ], - [ - "gene_synonym", - "add" - ], - [ - "gene_synonym", - "EcoGene:EG10030" - ], - [ - "gene_synonym", - "NP_416140.1" - ], - [ - "gene_synonym", - "ECK1618" - ], - [ - "gene_synonym", - "GI:16129581" - ] - ], - "dna_sequence": "ATGATTGATACCACCCTGCCATTAACTGATATCCATCGCCACCTTGATGGCAACATTCGTCCCCAGACCATTCTTGAACTTGGCCGCCAGTATAATATCTCGCTTCCTGCACAATCCCTGGAAACACTGATTCCCCACGTTCAGGTCATTGCCAACGAACCCGATCTGGTGAGCTTTCTGACCAAACTTGACTGGGGCGTTAAAGTTCTCGCCTCTCTTGATGCCTGTCGCCGCGTGGCATTTGAAAACATTGAAGATGCAGCCCGTCACGGCCTGCACTATGTCGAGCTGCGTTTTTCACCAGGCTACATGGCAATGGCACATCAGCTGCCTGTAGCGGGTGTTGTCGAAGCGGTGATCGATGGCGTACGTGAAGGTTGCCGCACCTTTGGTGTGCAGGCGAAGCTTATCGGCATTATGAGCCGGACCTTCGGCGAAGCCGCCTGTCAGCAAGAGCTGGAGGCCTTTTTAGCCCACCGTGACCAGATTACCGCACTTGATTTAGCCGGTGATGAACTTGGTTTCCCGGGAAGTCTGTTCCTTTCTCACTTCAACCGCGCGCGTGATGCGGGCTGGCATATTACCGTCCATGCAGGCGAAGCTGCCGGGCCGGAAAGCATCTGGCAGGCGATTCGTGAACTGGGTGCGGAGCGTATTGGACATGGCGTAAAAGCCATTGAAGATCGGGCGCTGATGGATTTTCTCGCCGAGCAACAAATTGGTATTGAATCCTGTCTGACCTCCAATATTCAGACCAGCACCGTAGCAGAGCTGGCTGCACATCCGCTGAAAACGTTCCTTGAGCATGGCATTCGTGCCAGCATTAACACTGACGATCCCGGCGTACAGGGAGTGGATATCATTCACGAATATACCGTTGCCGCGCCAGCTGCTGGGTTATCCCGCGAGCAAATCCGCCAGGCACAGATTAATGGTCTGGAAATGGCTTTCCTCAGCGCTGAGGAAAAACGCGCACTGCGAGAAAAAGTCGCCGCGAAGTAA", - "dna_sequence_length": 1002, - "functions": [ - "adenosine deaminase" - ], - "id": "CDS_1612", - "location": [ - [ - "NC_000913", - 1702233, - "+", - 1002 - ] - ], - "md5": "550950397c2a66299650ebe2b41d8eeb", - "parent_gene": "", - "protein_md5": "d44a2fd7d35146cf110895eb20e4d3bd", - "protein_translation": "MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLIPHVQVIANEPDLVSFLTKLDWGVKVLASLDACRRVAFENIEDAARHGLHYVELRFSPGYMAMAHQLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHRDQITALDLAGDELGFPGSLFLSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAIEDRALMDFLAEQQIGIESCLTSNIQTSTVAELAAHPLKTFLEHGIRASINTDDPGVQGVDIIHEYTVAAPAAGLSREQIRQAQINGLEMAFLSAEEKRALREKVAAK", - "protein_translation_length": 333, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1624" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77376" - ], - [ - "gene_synonym", - "EcoGene:EG13931" - ], - [ - "gene_synonym", - "JW5265" - ], - [ - "gene_synonym", - "ASAP:ABE-0005437" - ], - [ - "gene_synonym", - "NP_416141.4" - ], - [ - "gene_synonym", - "ydgJ" - ], - [ - "gene_synonym", - "GeneID:947164" - ], - [ - "gene_synonym", - "GI:90111307" - ], - [ - "gene_synonym", - "ECK1619" - ] - ], - "dna_sequence": "ATGAGCGACAACATCCGTGTTGGGTTGATTGGGTATGGTTATGCGAGCAAAACCTTCCATGCGCCCCTGATTGCGGGCACGCCCGGGCAGGAACTGGCGGTAATCTCCAGCAGTGATGAAACAAAAGTAAAAGCCGACTGGCCAACGGTTACGGTTGTCTCTGAGCCGAAGCATCTGTTTAACGATCCCAACATAGACCTGATTGTCATTCCTACACCCAACGATACCCATTTCCCGTTAGCCAAAGCGGCGCTTGAGGCGGGTAAACATGTGGTCGTTGATAAACCCTTTACCGTGACACTGTCACAAGCGCGAGAGCTGGATGCGCTGGCAAAAAGCCTGGGGCGTGTGCTGTCTGTATTCCATAACCGTCGCTGGGATAGCGATTTCTTGACGCTAAAAGGTTTACTCGCGGAAGGCGTGCTGGGTGAAGTTGCTTACTTTGAGTCTCATTTTGACCGCTTCCGTCCGCAGGTGCGCGATCGTTGGCGTGAACAGGGCGGCCCAGGCAGCGGTATCTGGTACGATTTAGCACCACATCTTCTTGATCAGGCCATTACGCTTTTTGGTTTACCGGTCAGCATGACGGTAGATTTGGCACAGTTACGGCCCGGAGCGCAGTCGACCGATTATTTCCACGCCATCTTGTCCTATCCACAGCGGCGAGTCATTTTACACGGTACCATGCTGGCAGCCGCTGAGTCAGCACGGTATATCGTGCATGGATCCCGAGGCAGTTATGTGAAATATGGCCTCGATCCACAGGAAGAACGTCTGAAAAATGGCGAGCGTCTACCGCAGGAAGACTGGGGCTACGATATGCGTGATGGCGTACTTACCCGCGTGGAAGGTGAGGAACGTGTCGAAGAAACGCTGTTGACGGTGCCTGGGAATTATCCGGCTTACTATGCGGCTATTCGTGATGCGTTAAATGGCGATGGTGAAAATCCGGTTCCGGCAAGCCAGGCAATCCAGGTAATGGAGTTGATTGAGCTGGGCATCGAATCCGCCAAACATCGCGCGACTTTGTGCCTTGCATGA", 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"ASAP:ABE-0047212" - ], - [ - "gene_synonym", - "JW5963" - ], - [ - "gene_synonym", - "GI:49176127" - ], - [ - "gene_synonym", - "b4409" - ], - [ - "gene_synonym", - "YP_025303.1" - ] - ], - "dna_sequence": "ATGAATCGTCTTATTGAATTAACAGGTTGGATCGTTCTTGTCGTTTCAGTCATTCTTCTTGGCGTGGCGAGTCACATTGACAACTATCAGCCACCTGAACAGAGTGCTTCGGTACAACACAAGTAA", - "dna_sequence_length": 126, - "functions": [ - "beta-lactam resistance membrane protein", - "divisome-associated protein" - ], - "id": "CDS_1614", - "location": [ - [ - "NC_000913", - 1704551, - "+", - 126 - ] - ], - "md5": "3fd2c836874068ca4b81f22b51fce6f7", - "parent_gene": "", - "protein_md5": "260145d3d032514e6a09ee528c2a5bfe", - "protein_translation": "MNRLIELTGWIVLVVSVILLGVASHIDNYQPPEQSASVQHK", - "protein_translation_length": 41, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cnu" - ], - [ - "gene_synonym", - "NP_416142.1" - ], - [ - "gene_synonym", - "EcoGene:EG14303" - ], - [ - "gene_synonym", - "ECK1621" - ], - [ - "gene_synonym", - "ydgT" - ], - [ - "gene_synonym", - "GeneID:946152" - ], - [ - "gene_synonym", - "b1625" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64467" - ], - [ - "gene_synonym", - "ASAP:ABE-0005443" - ], - [ - "gene_synonym", - "GI:16129583" - ], - [ - "gene_synonym", - "JW1617" - ] - ], - "dna_sequence": "ATGACTGTTCAGGACTACTTATTAAAATTTCGCAAAATCAGTTCACTCGAAAGTCTGGAAAAACTCTACGACCATCTTAATTACACCCTGACGGACGATCAGGAACTGATCAATATGTATCGTGCTGCCGATCACCGTCGCGCAGAGCTGGTTTCTGGCGGGCGTTTGTTTGACCTCGGCCAGGTACCGAAGTCCGTCTGGCACTATGTCCAATAA", - "dna_sequence_length": 216, - "functions": [ - "nucleoid-associated oriC-binding protein", - "H-NS and StpA stabilizing factor" - ], - "id": "CDS_1615", - "location": [ - [ - "NC_000913", - 1704949, - "+", - 216 - ] - ], - "md5": "20dbabe20dc8f12564f8d36446601dcf", - "parent_gene": "", - "protein_md5": "b2cdcea1d0c57fe6f0d34de0d283b551", - "protein_translation": "MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDDQELINMYRAADHRRAELVSGGRLFDLGQVPKSVWHYVQ", - "protein_translation_length": 71, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1618" - ], - [ - "gene_synonym", - "ydgK" - ], - [ - "gene_synonym", - "ECK1622" - ], - [ - "gene_synonym", - "EcoGene:EG13932" - ], - [ - "gene_synonym", - "GeneID:946154" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76180" - ], - [ - "gene_synonym", - "ASAP:ABE-0005447" - ], - [ - "gene_synonym", - "rsxP" - ], - [ - "gene_synonym", - "b1626" - ], - [ - "gene_synonym", - "NP_416143.2" - ], - [ - "gene_synonym", - "GI:90111308" - ] - ], - "dna_sequence": "ATGACCACCACAACGCCACAACGTATTGGAGGCTGGTTGCTTGGCCCGTTGGCCTGGCTTTTAGTCGCTCTGTTGAGTACGACGCTGGCGTTGTTGCTGTATACCGCTGCGTTATCTTCTCCGCAAACATTTCAAACGCTCGGCGGACAAGCACTGACGACACAAATCTTATGGGGCGTTTCTTTTATTACCGCTATCGCCTTGTGGTATTACACACTGTGGTTGACCATCGCTTTCTTTAAACGTCGGCGTTGTGTTCCTAAACACTATATTATCTGGCTGCTTATTTCCGTATTGCTGGCAGTAAAAGCATTCGCTTTTTCACCCGTGGAAGATGGCATAGCCGTTCGCCAGTTGCTGTTTACTTTGTTGGCAACCGCATTGATCGTCCCCTATTTCAAACGCTCGTCGCGGGTAAAAGCGACGTTTGTGAATCCGTAA", - "dna_sequence_length": 441, - "functions": [ - "DUF2569 family inner membrane protein" - ], - "id": "CDS_1616", - "location": [ - [ - "NC_000913", - 1705250, - "+", - 441 - ] - ], - "md5": "b8189c29a285342547781eb258c2998d", - "parent_gene": "", - "protein_md5": "79743816d85a4051a102a24dd65eee7a", - "protein_translation": "MTTTTPQRIGGWLLGPLAWLLVALLSTTLALLLYTAALSSPQTFQTLGGQALTTQILWGVSFITAIALWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAVKAFAFSPVEDGIAVRQLLFTLLATALIVPYFKRSSRVKATFVNP", - "protein_translation_length": 146, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rsxA" - ], - [ - "gene_synonym", - "JW1619" - ], - [ - "gene_synonym", - "GeneID:946148" - ], - [ - "gene_synonym", - "ECK1623" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A766" - ], - [ - "gene_synonym", - "EcoGene:EG13933" - ], - [ - "gene_synonym", - "rnfA" - ], - [ - "gene_synonym", - "b1627" - ], - [ - "gene_synonym", - "ydgL" - ], - [ - "gene_synonym", - "ASAP:ABE-0005450" - ], - [ - "gene_synonym", - "NP_416144.1" - ], - [ - "gene_synonym", - "GI:16129585" - ] - ], - "dna_sequence": "ATGACTGACTACCTGTTACTGTTTGTCGGAACTGTACTGGTCAATAACTTTGTACTGGTCAAGTTTCTCGGTCTCTGTCCGTTTATGGGGGTTTCCAAAAAACTGGAAACCGCGATGGGCATGGGGCTGGCAACAACGTTTGTGATGACGCTGGCGTCTATTTGCGCCTGGCTTATCGATACGTGGATTTTGATCCCACTTAATCTGATTTACCTGCGCACCCTGGCATTTATTCTGGTGATTGCTGTGGTCGTGCAGTTCACCGAGATGGTGGTGCGCAAAACCAGCCCGGTGCTTTACCGTCTGCTGGGGATTTTTTTGCCGCTTATCACCACCAACTGTGCAGTGCTCGGCGTGGCGTTGCTGAATATCAATCTCGGGCACAATTTCTTGCAGTCGGCGCTGTACGGTTTTTCCGCCGCTGTCGGTTTCTCGCTGGTGATGGTGCTCTTCGCCGCCATCCGCGAACGCCTTGCTGTGGCTGATGTCCCGGCACCTTTTCGCGGTAATGCCATTGCGTTAATTACCGCAGGTCTTATGTCTCTGGCCTTTATGGGCTTTAGTGGTTTGGTGAAGTTGTAA", - "dna_sequence_length": 582, - "functions": [ - "SoxR iron-sulfur cluster reduction factor component", - "inner membrane protein of electron transport complex" - ], - "id": "CDS_1617", - "location": [ - [ - "NC_000913", - 1705767, - "+", - 582 - ] - ], - "md5": "39e75b0b82a62ded5ecef31433e5bda9", - "parent_gene": "", - "protein_md5": "681c6b4ad29902edac090fcde2cc95c7", - "protein_translation": "MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLATTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRLLGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFAAIRERLAVADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL", - "protein_translation_length": 193, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rsxB" - ], - [ - "gene_synonym", - "JW1620" - ], - [ - "gene_synonym", - "GeneID:946146" - ], - [ - "gene_synonym", - "rnfB" - ], - [ - "gene_synonym", - "EcoGene:EG13934" - ], - [ - "gene_synonym", - "ECK1624" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77223" - ], - [ - "gene_synonym", - "NP_416145.1" - ], - [ - "gene_synonym", - "ydgM" - ], - [ - "gene_synonym", - "GI:16129586" - ], - [ - "gene_synonym", - "ASAP:ABE-0005452" - ], - [ - "gene_synonym", - "b1628" - ] - ], - "dna_sequence": "ATGAATGCTATCTGGATTGCCGTTGCCGCCGTGAGCCTGCTGGGCCTGGCGTTTGGCGCCATTCTGGGTTATGCCTCCCGCCGTTTTGCGGTGGAAGACGATCCGGTCGTTGAGAAAATTGACGAAATCTTACCGCAGAGCCAGTGTGGTCAGTGCGGTTATCCCGGCTGTCGCCCCTACGCGGAAGCCATCAGCTGTAACGGTGAAAAAATCAACCGTTGCGCCCCAGGTGGCGAAGCTGTGATGCTAAAAATTGCCGAGTTGCTTAATGTCGAGCCGCAGCCGCTGGATGGCGAAGCGCAAGAGATAACGCCTGCGCGGATGGTGGCGGTTATTGATGAAAATAACTGTATTGGCTGCACTAAATGTATTCAGGCGTGTCCGGTAGACGCCATCGTTGGCGCTACCCGTGCCATGCATACGGTAATGAGTGATCTCTGTACGGGCTGCAATTTATGTGTTGATCCGTGCCCGACGCACTGCATCTCGTTGCAACCGGTCGCAGAAACACCTGACTCCTGGAAATGGGATCTGAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAA", - "dna_sequence_length": 579, - "functions": [ - "SoxR iron-sulfur cluster reduction factor component", - "putative iron-sulfur protein" - ], - "id": "CDS_1618", - "location": [ - [ - "NC_000913", - 1706348, - "+", - 579 - ] - ], - "md5": "5d231db3c8f8021f0d6ed5122ac99853", - "parent_gene": "", - "protein_md5": "e931b23c42c5e9f893309e237936e6c3", - "protein_translation": "MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEILPQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQEITPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPVAETPDSWKWDLNTIPVRIIPVEHHA", - "protein_translation_length": 192, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416146.1" - ], - [ - "gene_synonym", - "rsxC" - ], - [ - "gene_synonym", - "JW1621" - ], - [ - "gene_synonym", - "EcoGene:EG13935" - ], - [ - "gene_synonym", - "rnfC" - ], - [ - "gene_synonym", - "ECK1625" - ], - [ - "gene_synonym", - "ydgN" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77611" - ], - [ - "gene_synonym", - "GI:16129587" - ], - [ - "gene_synonym", - "GeneID:946137" - ], - [ - "gene_synonym", - "ASAP:ABE-0005454" - ], - [ - "gene_synonym", - "b1629" - ] - ], - "dna_sequence": "ATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCACCTCGGGTACCGTTACGGCTATTGCGCCCCACTCTACGGCTCATCCTTCAGCTTTAGCTGAATTAAGCGTGATTATTGATGCCGATGGTGAAGACTGCTGGATCCCGCGCGACGGCTGGGCCGATTATCGCACTCGCAGTCGCGAAGAGTTAATCGAGCGCATACATCAGTTTGGTGTTGCCGGGCTGGGCGGTGCAGGATTCCCGACAGGCGTTAAATTGCAGGGTGGCGGAGATAAGATTGAAACGTTGATTATCAACGCGGCTGAGTGCGAGCCGTACATTACCGCCGATGACCGTTTGATGCAGGATTGCGCGGCTCAGGTCGTAGAGGGTATTCGCATTCTTGCGCATATTCTGCAGCCACGCGAAATTCTTATCGGCATTGAAGATAACAAACCGCAGGCGATTTCCATGCTGCGCGCGGTGCTGGCGGACTCTAACGATATTTCTCTGCGGGTGATTCCAACCAAATATCCTTCTGGCGGTGCTAAACAATTAACCTACATTCTGACCGGGAAGCAGGTTCCACATGGCGGGCGTTCATCCGATATCGGCGTATTAATGCAAAACGTCGGCACTGCTTATGCAGTGAAACGTGCCGTTATTGATGGCGAGCCGATTACCGAGCGTGTTGTAACCCTGACTGGCGAAGCAATCGCTCGCCCGGGCAACGTCTGGGCACGGCTGGGGACGCCAGTGCGTCATTTATTGAATGATGCCGGATTCTGCCCCTCTGCCGATCAAATGGTGATTATGGGTGGCCCGCTAATGGGCTTTACCTTGCCATGGCTGGATGTCCCGGTCGTAAAGATTACCAACTGTCTGTTGGCTCCCTCTGCCAATGAACTTGGCGAACCACAGGAAGAACAAAGCTGCATCCGGTGTAGCGCCTGTGCTGACGCCTGCCCTGCGGATCTTTTGCCGCAACAGTTGTACTGGTTCAGCAAAGGTCAGCAACACGATAAAGCTACCACGCATAACATTGCTGATTGCATTGAATGTGGGGCTTGCGCGTGGGTTTGCCCGAGCAATATTCCCCTGGTGCAATATTTCCGTCAGGAAAAAGCTGAAATTGCGGCTATTCGTCAGGAAGAAAAGCGCGCCGCAGAAGCCAAAGCGCGTTTCGAAGCGCGCCAGGCTCGTCTGGAGCGCGAAAAAGCGGCTCGCCTTGAACGACATAAGAGCGCAGCCGTTCAACCTGCAGCCAAAGATAAAGATGCGATTGCTGCCGCTCTGGCGCGGGTGAAAGAGAAACAGGCCCAGGCTACACAGCCTATTGTGATTAAAGCGGGCGAACGCCCGGATAACAGTGCAATTATTGCAGCACGGGAAGCCCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCGTTGCTGATCCACGTAAAACTGCCGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAAAAAGCCGCCCAGCAGAAGGTTGTAAACGAGGACTAA", 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"MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFVIPLKQHIGAEGELCVSVGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSALAELSVIIDADGEDCWIPRDGWADYRTRSREELIERIHQFGVAGLGGAGFPTGVKLQGGGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKPQAISMLRAVLADSNDISLRVIPTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNVGTAYAVKRAVIDGEPITERVVTLTGEAIARPGNVWARLGTPVRHLLNDAGFCPSADQMVIMGGPLMGFTLPWLDVPVVKITNCLLAPSANELGEPQEEQSCIRCSACADACPADLLPQQLYWFSKGQQHDKATTHNIADCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEEKRAAEAKARFEARQARLEREKAARLERHKSAAVQPAAKDKDAIAAALARVKEKQAQATQPIVIKAGERPDNSAIIAAREARKAQARAKQAELQQTNDAATVADPRKTAVEAAIARAKARKLEQQQANAEPEQQVDPRKAAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAEPEQQVDPRKAAVEAAIARAKARKREQQPANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAVPEEQVDPRKAAVAAAIARAQAKKAAQQKVVNED", - "protein_translation_length": 740, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416147.1" - ], - [ - "gene_synonym", - "rsxD" - ], - [ - "gene_synonym", - "rnfD" - ], - [ - "gene_synonym", - "b1630" - ], - [ - "gene_synonym", - "ECK1626" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76182" - ], - [ - "gene_synonym", - "ydgO" - ], - [ - "gene_synonym", - "GI:16129588" - ], - [ - "gene_synonym", - "GeneID:946134" - ], - [ - "gene_synonym", - "EcoGene:EG13936" - ], - [ - "gene_synonym", - "JW1622" - ], - [ - "gene_synonym", - "ASAP:ABE-0005457" - ] - ], - "dna_sequence": "ATGGTATTCAGAATAGCTAGCTCCCCTTATACCCATAACCAGCGCCAGACATCGCGCATTATGCTGTTGGTGTTGCTCGCAGCCGTGCCAGGAATCGCAGCGCAACTGTGGTTTTTTGGTTGGGGTACTCTCGTTCAGATCCTGTTGGCATCGGTTAGTGCTCTGTTAGCCGAAGCTCTCGTACTCAAACTACGCAAGCAGTCGGTAGCCGCAACGTTGAAAGATAACTCAGCATTGCTGACAGGCTTATTGCTGGCGGTAAGTATTCCCCCCCTCGCGCCATGGTGGATGGTCGTGCTGGGTACGGTGTTTGCGGTGATCATCGCTAAACAGTTGTATGGCGGTCTGGGACAAAACCCGTTTAATCCGGCAATGATTGGTTATGTGGTCTTACTGATCTCCTTCCCCGTGCAGATGACCAGCTGGTTACCGCCACATGAAATTGCGGTCAACATCCCTGGTTTTATCGACGCCATCCAGGTTATTTTTAGCGGTCATACCGCCAGTGGTGGTGATATGAACACACTACGCTTAGGTATTGATGGCATTAGTCAGGCGACACCGCTGGATACATTTAAAACCTCTGTCCGTGCCGGTCATTCGGTTGAACAGATTATGCAATATCCGATCTACAGCGGTATTCTGGCGGGCGCTGGTTGGCAATGGGTAAATCTCGCCTGGCTGGCTGGCGGCGTATGGTTGCTATGGCAGAAAGCGATTCGCTGGCATATTCCCCTCAGCTTCTTAGTAACGCTGGCGTTATGCGCAATGTTGGGCTGGTTGTTCTCACCAGAAACACTGGCAGCACCGCAAATTCATCTGCTGTCTGGAGCGACCATGCTCGGCGCATTCTTTATTTTGACTGACCCGGTTACCGCTTCTACGACCAATCGTGGTCGTCTTATTTTCGGCGCGCTTGCGGGCTTATTAGTCTGGTTGATCCGCAGTTTCGGCGGCTATCCTGACGGCGTGGCTTTTGCCGTCCTGCTGGCGAACATCACGGTTCCTCTGATCGATTACTACACGCGTCCGCGCGTCTACGGCCATCGCAAAGGGTAA", 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"rnfG" - ], - [ - "gene_synonym", - "b1631" - ], - [ - "gene_synonym", - "JW1623" - ], - [ - "gene_synonym", - "ECK1627" - ], - [ - "gene_synonym", - "EcoGene:EG13937" - ], - [ - "gene_synonym", - "NP_416148.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0005459" - ], - [ - "gene_synonym", - "GI:16129589" - ], - [ - "gene_synonym", - "ydgP" - ] - ], - "dna_sequence": "ATGCTGAAAACTATCCGAAAACACGGCATTACGTTGGCGCTATTTGCAGCGGGTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCACCCATTTTGCGGGTAAAAAAATCAGTGGTGCAGATGATGCGCACTGGGCGGTGAAGAAAGATGGTGGTGATTTCGACCAGTTCACCGGCGCGACGATTACTCCCCGCGCGGTGGTTAATGCGGTAAAACGCGCCGGATTGTACGCTCAGACGTTACCGGCACAACTTTCTCAACTTCCTGCCTGTGGAGAATAA", - "dna_sequence_length": 621, - "functions": [ - "SoxR iron-sulfur cluster reduction factor component", - "putative membrane protein of electron transport complex" - ], - "id": "CDS_1621", - "location": [ - [ - "NC_000913", - 1710204, - "+", - 621 - ] - ], - "md5": "bab7b9d996c29b391c53493829baf613", - "parent_gene": "", - "protein_md5": "911404ef7490a1d21d8b123e97b38dab", - "protein_translation": "MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKALFDQVLPAERYNNALAQSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSGAIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAVKKDGGDFDQFTGATITPRAVVNAVKRAGLYAQTLPAQLSQLPACGE", - "protein_translation_length": 206, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005461" - ], - [ - "gene_synonym", - "rnfE" - ], - [ - "gene_synonym", - "NP_416149.1" - ], - [ - "gene_synonym", - "ECK1628" - ], - [ - "gene_synonym", - "rsxE" - ], - [ - "gene_synonym", - "EcoGene:EG13938" - ], - [ - "gene_synonym", - "b1632" - ], - [ - "gene_synonym", - "ydgQ" - ], - [ - "gene_synonym", - "JW1624" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77179" - ], - [ - "gene_synonym", - "GeneID:947509" - ], - [ - "gene_synonym", - "GI:16129590" - ] - ], - "dna_sequence": "GTGAGCGAAATTAAAGACGTTATTGTTCAGGGGTTGTGGAAAAACAACTCTGCGCTGGTCCAGTTGCTCGGCCTTTGTCCTCTGTTGGCGGTCACGTCCACTGCCACTAACGCTCTGGGTTTAGGACTTGCGACTACGCTGGTACTGACGCTGACCAACCTGACCATTTCGACGCTGCGTCACTGGACGCCAGCCGAGATCCGCATTCCCATTTACGTGATGATCATCGCCTCGGTGGTCAGCGCTGTACAGATGCTGATCAACGCCTACGCCTTTGGCCTGTATCAATCATTAGGGATTTTTATTCCGCTGATTGTCACTAACTGTATCGTTGTGGGCCGCGCTGAAGCCTTCGCCGCCAAAAAAGGTCCGGCGCTTTCGGCACTGGACGGCTTTTCAATTGGTATGGGCGCAACCTGCGCCATGTTCGTGCTGGGTTCACTACGCGAAATTATCGGCAATGGCACATTGTTTGACGGTGCAGATGCGCTGTTAGGTAGCTGGGCAAAAGTATTACGCGTGGAGATTTTCCACACCGACTCCCCTTTCCTGCTGGCGATGCTGCCACCAGGTGCATTTATTGGCCTGGGACTGATGCTGGCAGGAAAATACCTGATTGATGAAAGAATGAAAAAGCGCCGTGCTGAAGCAGCTGCAGAACGTGCATTGCCAAACGGTGAAACAGGGAATGTCTGA", - "dna_sequence_length": 696, - "functions": [ - "SoxR iron-sulfur cluster reduction factor component", - "electron transport inner membrane NADH-quinone reductase" - ], - "id": "CDS_1622", - "location": [ - [ - "NC_000913", - 1710828, - "+", - 696 - ] - ], - "md5": "fac5e20cc4d0f51d7ebf699cb316f16c", - "parent_gene": "", - "protein_md5": "6cddeefa00b22dee1d7524809c6ff43a", - "protein_translation": "MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGETGNV", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1629" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB83" - ], - [ - "gene_synonym", - "b1633" - ], - [ - "gene_synonym", - "EcoGene:EG10662" - ], - [ - "gene_synonym", - "ASAP:ABE-0005463" - ], - [ - "gene_synonym", - "JW1625" - ], - [ - "gene_synonym", - "nth" - ], - [ - "gene_synonym", - "GeneID:947122" - ], - [ - "gene_synonym", - "NP_416150.1" - ], - [ - "gene_synonym", - "GI:16129591" - ] - ], - "dna_sequence": "ATGAATAAAGCAAAACGCCTGGAGATCCTCACTCGCCTGCGTGAGAACAATCCTCATCCCACCACCGAGCTTAATTTCAGTTCGCCTTTTGAATTGCTGATTGCCGTACTGCTTTCCGCTCAGGCGACCGATGTCAGTGTTAATAAGGCGACGGCGAAACTCTACCCGGTGGCGAATACGCCTGCAGCGATGCTTGAACTGGGCGTTGAAGGGGTGAAAACCTATATCAAAACGATTGGGCTTTATAACAGCAAAGCAGAAAATATCATCAAAACCTGCCGTATCTTGCTGGAGCAGCATAATGGCGAGGTTCCGGAAGATCGTGCTGCGCTTGAAGCCCTGCCCGGCGTAGGTCGTAAAACAGCCAACGTCGTATTAAACACTGCATTCGGCTGGCCGACTATTGCTGTCGACACGCACATTTTCCGCGTTTGTAATCGTACTCAATTTGCGCCGGGGAAAAACGTCGAACAGGTAGAAGAAAAGCTACTGAAAGTGGTTCCAGCAGAGTTTAAAGTCGACTGCCACCATTGGTTGATCCTGCACGGGCGTTATACCTGCATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGTTGACATCTGA", - "dna_sequence_length": 636, - "functions": [ - "DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)" - ], - "id": "CDS_1623", - "location": [ - [ - "NC_000913", - 1711523, - "+", - 636 - ] - ], - "md5": "6f181e935a27422647ce8909df9b11a5", - "parent_gene": "", - "protein_md5": "2e3946f18d148e9aa5d7104f4a7b2eeb", - "protein_translation": "MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVDI", - "protein_translation_length": 211, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13939" - ], - [ - "gene_synonym", - "GeneID:947436" - ], - [ - "gene_synonym", - "NP_416151.1" - ], - [ - "gene_synonym", - "ECK1630" - ], - [ - "gene_synonym", - "dtpA" - ], - [ - "gene_synonym", - "JW1626" - ], - [ - "gene_synonym", - "b1634" - ], - [ - "gene_synonym", - "ydgR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77304" - ], - [ - "gene_synonym", - "tppB" - ], - [ - "gene_synonym", - "GI:16129592" - ], - [ - "gene_synonym", - "ASAP:ABE-0005469" - ] - ], - "dna_sequence": "GTGTCCACTGCAAACCAAAAACCAACTGAAAGCGTCAGTTTGAACGCTTTCAAACAACCGAAGGCGTTCTATCTCATCTTCTCGATTGAGTTATGGGAACGTTTTGGTTATTACGGCCTACAAGGAATTATGGCTGTTTACCTGGTTAAACAACTGGGTATGTCTGAAGCGGATTCAATCACCCTTTTCTCTTCCTTTAGTGCCCTGGTTTATGGTCTGGTCGCTATCGGCGGCTGGTTAGGTGACAAGGTACTGGGTACTAAACGCGTAATTATGCTCGGCGCTATTGTGCTGGCGATTGGTTATGCTCTGGTTGCCTGGTCTGGTCACGACGCCGGTATCGTTTATATGGGTATGGCGGCTATTGCGGTCGGTAACGGCCTGTTTAAAGCTAACCCGTCTTCTCTGCTTTCTACATGCTATGAGAAAAACGACCCGCGTCTGGACGGTGCATTCACCATGTACTACATGTCCGTCAACATCGGCTCTTTCTTCTCTATGATTGCTACGCCGTGGCTGGCCGCGAAATACGGCTGGAGTGTTGCGTTTGCGTTGAGCGTTGTAGGCCTGCTGATCACTATCGTTAACTTCGCCTTCTGCCAACGCTGGGTTAAACAGTACGGTTCAAAACCAGACTTCGAGCCTATCAACTACCGTAACCTGCTGCTGACCATTATTGGTGTTGTGGCACTGATCGCTATCGCCACCTGGCTGCTGCACAATCAGGAAGTTGCGCGTATGGCGCTGGGCGTTGTTGCCTTCGGTATCGTGGTTATCTTCGGTAAAGAAGCCTTCGCGATGAAAGGTGCTGCGCGTCGTAAAATGATCGTTGCCTTCATCCTGATGCTCGAAGCCATTATCTTCTTCGTGCTGTACAGCCAGATGCCAACGTCACTGAACTTCTTTGCGATTCGTAACGTTGAGCACTCCATTCTGGGTCTGGCCGTAGAACCTGAGCAGTATCAGGCACTGAACCCGTTCTGGATCATCATCGGTAGTCCGATTCTGGCCGCTATCTATAACAAGATGGGCGATACCCTGCCGATGCCAACCAAGTTTGCAATCGGCATGGTGATGTGTTCTGGTGCGTTCCTGATTCTGCCGCTGGGTGCGAAATTCGCGTCTGACGCTGGTATCGTGTCTGTAAGCTGGCTGGTCGCAAGCTATGGCCTGCAGAGCATCGGGGAACTGATGATCTCTGGTCTGGGTCTGGCAATGGTTGCTCAACTCGTTCCGCAGCGTCTGATGGGCTTCATTATGGGTAGCTGGTTCCTGACCACTGCCGGTGCAAACCTGATTGGTGGTTATGTTGCGGGTATGATGGCTGTGCCGGATAACGTTACCGATCCGCTGATGTCACTGGAAGTCTATGGTCGCGTATTCTTGCAGATTGGTGTCGCTACTGCCGTTATTGCAGTACTGATGCTGCTGACCGCGCCGAAACTGCACCGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAA", 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"gene_synonym", - "ECK1631" - ], - [ - "gene_synonym", - "NP_416152.1" - ], - [ - "gene_synonym", - "b1635" - ], - [ - "gene_synonym", - "JW1627" - ], - [ - "gene_synonym", - "EcoGene:EG12613" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9D2" - ], - [ - "gene_synonym", - "gstA" - ], - [ - "gene_synonym", - "ASAP:ABE-0005473" - ], - [ - "gene_synonym", - "GI:16129593" - ] - ], - "dna_sequence": "ATGAAATTGTTCTACAAACCGGGTGCCTGCTCTCTCGCTTCCCATATCACCCTGCGTGAGAGCGGAAAGGATTTTACCCTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATTTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACAAACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAGGCACTGAAGGATGAGCACTGGATCTGCGGGCAAAGATTTACAATTGCTGATGCCTATCTGTTTACGGTTCTGCGCTGGGCATACGCGGTGAAACTGAATCTGGAAGGGTTAGAGCACATTGCAGCATTTATGCAACGTATGGCTGAACGTCCGGAAGTACAAGACGCGCTGTCAGCGGAAGGCTTAAAGTAA", - "dna_sequence_length": 606, - "functions": [ - "glutathionine S-transferase" - ], - "id": "CDS_1625", - "location": [ - [ - "NC_000913", - 1714377, - "+", - 606 - ] - ], - "md5": "c8a8591f15b6805d2b9b785bc7dad0c0", - "parent_gene": "", - "protein_md5": "d76a3d3965661b7f68059d8501c00579", - "protein_translation": "MKLFYKPGACSLASHITLRESGKDFTLVSVDLMKKRLENGDDYFAVNPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVNSISRYKTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKLQYVNEALKDEHWICGQRFTIADAYLFTVLRWAYAVKLNLEGLEHIAAFMQRMAERPEVQDALSAEGLK", - "protein_translation_length": 201, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1628" - ], - [ - "gene_synonym", - "EcoGene:EG13940" - ], - [ - "gene_synonym", - "ydgS" - ], - [ - "gene_synonym", - "ECK1632" - ], - [ - "gene_synonym", - "b1636" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77150" - ], - [ - "gene_synonym", - "pdxY" - ], - [ - "gene_synonym", - "GeneID:946162" - ], - [ - "gene_synonym", - "NP_416153.1" - ], - [ - "gene_synonym", - "GI:16129594" - ], - [ - "gene_synonym", - "ASAP:ABE-0005475" - ] - ], - "dna_sequence": "ATGATGAAAAATATTCTCGCTATCCAGTCTCACGTTGTTTATGGTCATGCGGGTAACAGTGCGGCAGAGTTTCCGATGCGCCGCCTGGGCGCGAACGTCTGGCCGCTGAACACCGTTCAATTTTCTAATCACACCCAATACGGCAAATGGACTGGCTGCGTGATGCCGCCCAGCCATTTAACCGAAATTGTGCAAGGCATTGCCGCCATTGATAAATTACACACCTGTGATGCCGTATTAAGTGGCTATCTGGGATCGGCGGAGCAGGGTGAACATATCCTCGGTATCGTCCGTCAGGTGAAAGCCGCGAATCCGCAGGCGAAATATTTTTGCGATCCGGTAATGGGTCATCCGGAAAAAGGCTGTATCGTTGCACCGGGTGTCGCAGAGTTTCATGTGCGGCACGGTTTGCCTGCCAGCGATATCATTGCGCCAAATCTGGTTGAGCTGGAAATACTCTGTGAGCATGCGGTAAATAACGTCGAAGAAGCGGTTCTGGCAGCGCGCGAACTCATTGCGCAAGGGCCACAAATTGTGTTGGTTAAACACCTGGCGCGAGCTGGCTACAGCCGTGACCGTTTTGAAATGCTGCTGGTCACCGCCGATGAAGCCTGGCATATCAGCCGTCCGCTGGTGGATTTTGGTATGCGCCAGCCGGTAGGTGTTGGTGATGTGACGAGCGGTTTACTGCTGGTGAAACTGCTTCAGGGGGCAACGCTGCAGGAGGCGCTGGAACATGTGACCGCTGCAGTCTACGAAATCATGGTGACCACCAAAGCAATGCAGGAATATGAGCTGCAAGTGGTGGCTGCTCAGGATCGTATTGCCAAACCAGAACATTACTTCAGCGCAACAAAGCTCTGA", - "dna_sequence_length": 864, - "functions": [ - "pyridoxamine kinase" - ], - "id": "CDS_1626", - "location": [ - [ - "NC_000913", - 1715889, - "-", - 864 - ] - ], - "md5": "b89a40ddc4d31f63462fc75a47da6ad7", - "parent_gene": "", - "protein_md5": "1c961799c8e66571363c81642cf2ab91", - "protein_translation": "MMKNILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLTEIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQPVGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIAKPEHYFSATKL", - "protein_translation_length": 287, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tyrS" - ], - [ - "gene_synonym", - "JW1629" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGJ9" - ], - [ - "gene_synonym", - "NP_416154.1" - ], - [ - "gene_synonym", - "ECK1633" - ], - [ - "gene_synonym", - "b1637" - ], - [ - "gene_synonym", - "ASAP:ABE-0005477" - ], - [ - "gene_synonym", - "GI:16129595" - ], - [ - "gene_synonym", - "GeneID:948855" - ], - [ - "gene_synonym", - "EcoGene:EG11043" - ] - ], - "dna_sequence": "ATGGCAAGCAGTAACTTGATTAAACAATTGCAAGAGCGGGGGCTGGTAGCCCAGGTGACGGACGAGGAAGCGTTAGCAGAGCGACTGGCGCAAGGCCCGATCGCGCTCTATTGCGGCTTCGATCCTACCGCTGACAGCTTGCATTTGGGGCATCTTGTTCCATTGTTATGCCTGAAACGCTTCCAGCAGGCGGGCCACAAGCCGGTTGCGCTGGTAGGCGGCGCGACGGGTCTGATTGGCGACCCGAGCTTCAAAGCTGCCGAGCGTAAGCTGAACACCGAAGAAACTGTTCAGGAGTGGGTGGACAAAATCCGTAAGCAGGTTGCCCCGTTCCTCGATTTCGACTGTGGAGAAAACTCTGCTATCGCGGCGAACAACTATGACTGGTTCGGCAATATGAATGTGCTGACCTTCCTGCGCGATATTGGCAAACACTTCTCCGTTAACCAGATGATCAACAAAGAAGCGGTTAAGCAGCGTCTCAACCGTGAAGATCAGGGGATTTCGTTCACTGAGTTTTCCTACAACCTGTTGCAGGGTTATGACTTCGCCTGTCTGAACAAACAGTACGGTGTGGTGCTGCAAATTGGTGGTTCTGACCAGTGGGGTAACATCACTTCTGGTATCGACCTGACCCGTCGTCTGCATCAGAATCAGGTGTTTGGCCTGACCGTTCCGCTGATCACTAAAGCAGATGGCACCAAATTTGGTAAAACTGAAGGCGGCGCAGTCTGGTTGGATCCGAAGAAAACCAGCCCGTACAAATTCTACCAGTTCTGGATCAACACTGCGGATGCCGACGTTTACCGCTTCCTGAAGTTCTTCACCTTTATGAGCATTGAAGAGATCAACGCCCTGGAAGAAGAAGATAAAAACAGCGGTAAAGCACCGCGCGCCCAGTATGTACTGGCGGAGCAGGTGACTCGTCTGGTTCACGGTGAAGAAGGTTTACAGGCGGCAAAACGTATTACCGAATGCCTGTTCAGCGGTTCTTTGAGTGCGCTGAGTGAAGCGGACTTCGAACAGCTGGCGCAGGACGGCGTACCGATGGTTGAGATGGAAAAGGGCGCAGACCTGATGCAGGCACTGGTCGATTCTGAACTGCAACCTTCCCGTGGTCAGGCACGTAAAACTATCGCCTCCAATGCCATCACCATTAACGGTGAAAAACAGTCCGATCCTGAATACTTCTTTAAAGAAGAAGATCGTCTGTTTGGTCGTTTTACCTTACTGCGTCGCGGTAAAAAGAATTACTGTCTGATTTGCTGGAAATAA", 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"gene_synonym", - "GeneID:946806" - ], - [ - "gene_synonym", - "ECK1634" - ], - [ - "gene_synonym", - "ASAP:ABE-0005482" - ], - [ - "gene_synonym", - "JW1630" - ], - [ - "gene_synonym", - "GI:16129596" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFI7" - ] - ], - "dna_sequence": "ATGTCTGATAACGACGAATTGCAGCAAATCGCGCATCTGCGCCGTGAATACACCAAAGGCGGGTTACGCCGCCGCGATCTTCCCGCCGATCCATTAACCCTTTTTGAACGTTGGCTCTCTCAGGCTTGTGAAGCCAAACTGGCGGACCCTACCGCGATGGTGGTCGCTACCGTGGATGAACATGGTCAGCCTTATCAGCGCATCGTTTTACTCAAACATTACGACGAAAAAGGCATGGTGTTTTACACCAACCTCGGCAGCCGTAAAGCACATCAAATCGAAAATAATCCGCGCGTTAGCCTGCTGTTCCCGTGGCATACCCTTGAGCGCCAGGTGATGGTGATCGGTAAAGCAGAACGACTTTCGACTCTCGAAGTGATGAAATATTTTCATAGCCGCCCGCGTGATAGCCAGATTGGTGCATGGGTTTCGAAGCAGTCCAGTCGCATTTCTGCCCGCGGTATCCTTGAAAGTAAATTCCTGGAGCTGAAGCAGAAGTTTCAACAGGGCGAAGTGCCATTGCCGAGCTTTTGGGGCGGTTTTCGCGTCAGCCTTGAACAGATTGAGTTCTGGCAGGGTGGTGAGCATCGCCTGCATGACCGCTTTTTGTACCAGCGTGAAAATGATGCGTGGAAGATTGATCGTCTTGCACCCTGA", - "dna_sequence_length": 657, - "functions": [ - "pyridoxine 5'-phosphate oxidase" - ], - "id": "CDS_1628", - "location": [ - [ - "NC_000913", - 1718007, - "-", - 657 - ] - ], - "md5": "953d7cd8ba4ce9f1605fc0fddc329a34", - "parent_gene": "", - "protein_md5": "703f9b9778717f8100d9df88d0cc741a", - "protein_translation": "MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACEAKLADPTAMVVATVDEHGQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLLFPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP", - "protein_translation_length": 218, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1639" - ], - [ - "gene_synonym", - "EcoGene:EG11488" - ], - [ - "gene_synonym", - "GeneID:946811" - ], - [ - "gene_synonym", - "ydhA" - ], - [ - "gene_synonym", - "ASAP:ABE-0005485" - ], - [ - "gene_synonym", - "ECK1635" - ], - [ - "gene_synonym", - "NP_416156.4" - ], - [ - "gene_synonym", - "JW1631" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28224" - ], - [ - "gene_synonym", - "GI:90111309" - ], - [ - "gene_synonym", - "mliC" - ] - ], - "dna_sequence": "ATGACTATGAAAAAACTGTTAATTATCATTTTGCCGGTCCTTCTCTCCGGCTGTAGCGCCTTTAATCAGCTGGTTGAGCGCATGCAAACCGATACGCTGGAATACCAGTGTGATGAAAAACCGTTGACGGTCAAACTGAATAATCCGCGCCAGGAGGTCAGTTTTGTTTACGATAATCAACTACTGCATCTCAAACAGGGCATTTCAGCCTCTGGCGCGCGTTACACTGACGGAATCTATGTTTTCTGGTCGAAAGGCGATGAAGCGACTGTCTATAAACGCGACCGCATCGTCTTGAATAACTGTCAGTTACAAAATCCACAGCGTTGA", - "dna_sequence_length": 330, - "functions": [ - "inhibitor of c-type lysozyme, membrane-bound", - "putative lipoprotein" - ], - "id": "CDS_1629", - "location": [ - [ - "NC_000913", - 1718395, - "-", - 330 - ] - ], - "md5": "95b742fc19b654eb7019cefd897d05f8", - "parent_gene": "", - "protein_md5": "8e9f6946e556506a4b25b02adb2d3e90", - "protein_translation": "MTMKKLLIIILPVLLSGCSAFNQLVERMQTDTLEYQCDEKPLTVKLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGDEATVYKRDRIVLNNCQLQNPQR", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13942" - ], - [ - "gene_synonym", - "ydhH" - ], - [ - "gene_synonym", - "ASAP:ABE-0005488" - ], - [ - "gene_synonym", - "GeneID:946810" - ], - [ - "gene_synonym", - "ECK1636" - ], - [ - "gene_synonym", - "anmK" - ], - [ - "gene_synonym", - "b1640" - ], - [ - "gene_synonym", - "NP_416157.1" - ], - [ - "gene_synonym", - "GI:16129598" - ], - [ - "gene_synonym", - "JW1632" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77570" - ] - ], - "dna_sequence": "ATGAAATCGGGCCGCTTTATTGGCGTTATGTCAGGCACCAGCCTTGATGGTGTTGATGTTGTGTTGGCGACAATTGATGAACACCGGGTCGCACAGCTGGCAAGTTTGAGTTGGCCGATCCCGGTATCTCTGAAACAGGCTGTACTGGATATTTGCCAGGGCCAGCAGCTTACACTTTCGCAGTTTGGACAGCTTGATACTCAACTCGGGCAACTTTTTGCTGATGCGGTCAATGCCTTGCTTAAGGAACAAAATCTGCAGGCAAGAGATATAGTTGCGATCGGTTGTCACGGTCAAACCGTCTGGCATGAACCGACGGGCGTGGCACCACACACTTTACAGATTGGCGATAACAATCAAATTGTGGCACGCACCGGAATTACGGTTGTCGGTGATTTTCGCCGTCGCGATATTGCCTTGGGAGGACAAGGCGCACCGCTGGTACCTGCGTTCCATCATGCGCTGCTGGCTCACCCAACCGAGCGACGAATGGTGCTCAATATTGGCGGCATCGCCAATCTGTCACTGCTCATTCCTGGGCAGCCGGTTGGGGGCTACGATACCGGTCCTGGTAACATGCTGATGGATGCCTGGATCTGGCGTCAGGCCGGTAAACCTTACGATAAAGATGCCGAGTGGGCACGGGCGGGTAAAGTTATTCTCCCACTGCTGCAAAATATGCTCAGCGACCCGTATTTCTCGCAACCTGCACCGAAAAGCACCGGACGCGAATACTTTAACTATGGTTGGCTGGAGCGCCATTTGCGCCATTTTCCGGGTGTTGATCCCCGAGATGTGCAGGCGACACTGGCAGAACTCACCGCCGTGACCATTTCTGAACAAGTTTTGTTGAGCGGTGGCTGCGAACGATTGATGGTATGTGGTGGAGGTAGTCGTAATCCGCTACTCATGGCGCGTCTGGCGGCATTACTGCCAGGCACAGAAGTCACCACCACCGATGCCGTTGGCATTAGTGGCGATGACATGGAAGCATTGGCTTTCGCCTGGCTTGCCTGGCGGACGCTGGCGGGATTACCAGGAAATCTGCCTTCCGTCACTGGCGCAAGCCAGGAGACGGTACTGGGGGCTATTTTCCCCGCTAACCCGTGA", 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[ - "gene_synonym", - "EcoGene:EG13409" - ], - [ - "gene_synonym", - "b1641" - ], - [ - "gene_synonym", - "GI:49176129" - ], - [ - "gene_synonym", - "JW1633" - ], - [ - "gene_synonym", - "ASAP:ABE-0005493" - ] - ], - "dna_sequence": "ATGATTAAACGCGTATTGGTTGTTTCAATGGTAGGTCTGTCTCTTGTCGGTTGTGTTAATAACGACACCCTGTCAGGGGATGTTTATACCGCTTCTGAAGCGAAACAAGTACAGAATGTCAGCTATGGCACCATCGTTAACGTACGTCCGGTACAGATTCAGGGCGGTGATGATTCCAACGTTATCGGTGCAATTGGCGGTGCTGTTCTTGGTGGTTTCCTGGGGAATACTGTTGGTGGCGGAACCGGGCGTTCTCTGGCTACTGCAGCAGGCGCTGTTGCAGGTGGCGTAGCTGGTCAGGGCGTACAGAGTGCAATGAACAAAACGCAGGGTGTCGAGCTGGAAATTCGTAAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAA", - "dna_sequence_length": 468, - "functions": [ - "outer membrane lipoprotein" - ], - "id": "CDS_1631", - "location": [ - [ - "NC_000913", - 1719876, - "+", - 468 - ] - ], - "md5": "6f874ab798195eeb78cfba544a81fa2d", - "parent_gene": "", - "protein_md5": "b2a03d2e7fe3b375a54295440bd78a9a", - "protein_translation": "MIKRVLVVSMVGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGTIVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGQGVQSAMNKTQGVELEIRKDDGNTIMVVQKQGNTRFSPGQRVVLASNGSQVTVSPR", - "protein_translation_length": 155, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1638" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8W2" - ], - [ - "gene_synonym", - "slyA" - ], - [ - "gene_synonym", - "ASAP:ABE-0005495" - ], - [ - "gene_synonym", - "JW5267" - ], - [ - "gene_synonym", - "b1642" - ], - [ - "gene_synonym", - "EcoGene:EG13408" - ], - [ - "gene_synonym", - "GeneID:946167" - ], - [ - "gene_synonym", - "GI:90111310" - ], - [ - "gene_synonym", - "NP_416159.2" - ] - ], - "dna_sequence": "TTGGAATCGCCACTAGGTTCTGATCTGGCACGGTTGGTGCGCATATGGCGTGCTCTGATAGACCATCGCCTGAAACCGCTGGAGTTAACACAAACCCATTGGGTTACGTTACACAATATCCATCAGTTACCTCCAGACCAGTCGCAAATTCAACTGGCAAAAGCGATTGGCATCGAGCAGCCATCACTGGTCCGTACTCTGGACCAACTGGAAGAAAAAGGGTTAATTTCGCGTCAAACTTGTGCCAGCGATCGTCGGGCTAAACGTATTAAACTGACGGAAAAGGCAGAGCCGCTGATCAGCGAAATGGAAGCTGTTATTAACAAAACCCGCGCGGAAATATTACATGGCATCTCCGCAGAGGAACTGGAGCAACTGATTACGCTCATCGCAAAACTTGAGCATAATATCATTGAGTTACAGGCCAAAGGGTGA", - "dna_sequence_length": 435, - "functions": [ - "global transcriptional regulator" - ], - "id": "CDS_1632", - "location": [ - [ - "NC_000913", - 1720824, - "-", - 435 - ] - ], - "md5": "95b9c9f57bb817c5e27f421c12053cba", - "parent_gene": "", - "protein_md5": "64a1a1fc28a6d2232237a509090132ae", - "protein_translation": "MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLISEMEAVINKTRAEILHGISAEELEQLITLIAKLEHNIIELQAKG", - "protein_translation_length": 144, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1639" - ], - [ - "gene_synonym", - "ydhI" - ], - [ - "gene_synonym", - "EcoGene:EG13943" - ], - [ - "gene_synonym", - "ASAP:ABE-0005499" - ], - [ - "gene_synonym", - "NP_416160.1" - ], - [ - "gene_synonym", - "b1643" - ], - [ - "gene_synonym", - "JW1635" - ], - [ - "gene_synonym", - "GeneID:947559" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64471" - ], - [ - "gene_synonym", - "GI:16129601" - ] - ], - "dna_sequence": "GTGAAGTTTATGCTCAATGCAACAGGATTGCCCTTACAAGATCTGGTGTTCGGTGCGTCCGTCTACTTTCCTCCGTTTTTCAAAGCATTCGCGTTTGGATTCGTCATCTGGCTTGTCGTACACCGCCTGCTTCGTGGCTGGATCTACGCCGGTGACATCTGGCATCCCTTGTTAATGGATTTATCGCTGTTTGCGATTTGCGTTTGCCTTGCTCTGGCAATACTGATTGCGTGGTAA", - "dna_sequence_length": 237, - "functions": [ - "DUF1656 family putative inner membrane efflux pump associated protein" - ], - "id": "CDS_1633", - "location": [ - [ - "NC_000913", - 1721025, - "+", - 237 - ] - ], - "md5": "b6f4b996618ad5d0ddad0263e1e684be", - "parent_gene": "", - "protein_md5": "d10291ec91a7668a07ebae273da5f232", - "protein_translation": "MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW", - "protein_translation_length": 78, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ydhJ" - ], - [ - "gene_synonym", - "EcoGene:EG13944" - ], - [ - "gene_synonym", - "NP_416161.4" - ], - [ - "gene_synonym", - "ECK1640" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76185" - ], - [ - "gene_synonym", - "JW1636" - ], - [ - "gene_synonym", - "b1644" - ], - [ - "gene_synonym", - "GI:90111311" - ], - [ - "gene_synonym", - "GeneID:946499" - ], - [ - "gene_synonym", - "ASAP:ABE-0005501" - ] - ], - "dna_sequence": "ATGTCAATTAAAACAATTAAGTATTTCTCAACAATCATTGTAGCGGTAGTTGCGGTTCTTGCCGGATGGTGGCTGTGGAATTATTACATGCAATCTCCGTGGACACGCGACGGGAAAATACGCGCAGAACAGGTTTCTATCACCCCACAGGTGTCGGGACGTATTGTTGAGCTGAATATAAAAGACAACCAGCTGGTTAACGCGGGGGATCTTCTGCTCACGATCGATAAAACGCCCTTTCAGATCGCCGAGCTGAACGCACAGGCTCAGCTGGCGAAAGCGCAATCTGACCTCGCAAAAGCCAATAACGAAGCGAATCGTCGTCGTCATCTCTCACAAAATTTTATTTCTGCCGAAGAACTCGATACCGCTAACCTCAATGTTAAAGCGATGCAGGCCAGTGTTGATGCCGCACAGGCGACGCTGAAACAGGCACAATGGCAACTGGCGCAAACGGAAATTCGCGCCCCGGTGAGTGGATGGGTGACTAACCTTACTACCCGCATCGGCGATTACGCTGATACCGGGAAACCGCTGTTTGCCCTTGTCGACAGCCACTCGTTTTACGTCATTGGTTATTTTGAAGAAACCAAGTTGCGCCATATCCGCGAAGGTGCACCAGCACAAATTACCCTCTATAGTGATAACAAAACGTTACAGGGTCACGTTTCCAGTATCGGTCGGGCGATTTATGATCAGAGCGTTGAAAGTGACTCAAGCCTTATTCCGGATGTTAAACCTAACGTCCCCTGGGTTCGACTCGCCCAACGCGTTCCCGTCCGCTTTGCGCTGGATAAAGTCCCAGGCGATGTCACGTTGGTGTCGGGCACCACCTGTAGCATTGCCGTAGGTCAATAA", - "dna_sequence_length": 858, - "functions": [ - "putative membrane fusion protein (MFP) of YdhJK efflux pump" - ], - "id": "CDS_1634", - "location": [ - [ - "NC_000913", - 1721264, - "+", - 858 - ] - ], - "md5": "af29d9e26372ebfc3f8cf819d54288bf", - "parent_gene": "", - "protein_md5": "fd8919f6b2d6a3ae776d12d149eb4130", - "protein_translation": "MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSIGRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSGTTCSIAVGQ", - "protein_translation_length": 285, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ydhK" - ], - [ - "gene_synonym", - "ECK1641" - ], - [ - "gene_synonym", - "EcoGene:EG13945" - ], - [ - "gene_synonym", - "GeneID:946528" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76186" - ], - [ - "gene_synonym", - "JW1637" - ], - [ - "gene_synonym", - "b1645" - ], - [ - "gene_synonym", - "GI:16129603" - ], - [ - "gene_synonym", - "ASAP:ABE-0005503" - ], - [ - "gene_synonym", - "NP_416162.1" - ] - ], - "dna_sequence": "ATGAACGCATCGTCATGGTCCTTGCGCAATTTGCCCTGGTTCAGGGCCACGCTGGCGCAATGGCGTTATGCGTTACGCAATACCATTGCCATGTGTCTGGCGCTGACGGTTGCCTATTATTTAAATCTGGATGAACCCTATTGGGCGATGACCTCGGCTGCAGTGGTTAGCTTTCCCACCGTTGGCGGTGTTATCAGCAAAAGCCTCGGACGCATCGCTGGCAGTTTGCTCGGAGCCATTGCGGCACTGCTTCTTGCCGGGCATACGCTCAATGAGCCGTGGTTTTTTCTATTGAGCATGTCGGCGTGGCTTGGCTTTTGTACCTGGGCCTGTGCGCACTTCACGAATAACGTCGCGTATGCATTTCAACTGGCGGGCTACACGGCTGCCATCATCGCCTTTCCGATGGTTAATATTACTGAGGCCAGCCAGCTGTGGGATATCGCTCAGGCGCGCGTTTGCGAGGTAATAGTCGGTATTTTGTGCGGCGGCATGATGATGATGATCCTGCCGAGCAGTTCCGATGCTACTGCCCTTTTAACCGCATTGAAAAACATGCACGCCCGATTACTGGAACATGCCAGTTTACTCTGGCAGCCTGAAACAACCGATGCCATTCGTGCAGCACATGAAGGGGTGATTGGGCAGATACTGACCATGAATTTGCTGCGTATCCAGGCTTTCTGGAGCCACTATCGTTTTCGCCAGCAAAACGCGCGCCTTAATGCGCTGCTCCACCAGCAATTACGTATGACCAGTGTCATCTCCAGCCTGCGACGTATGTTGCTCAACTGGCCCTCACCGCCAGGTGCCACACGAGAAATTCTCGAACAGTTGCTGACGGCGCTCGCCAGTTCGCAAACAGATGTTTACACCGTCGCACGTATTATCGCCCCGCTACGCCCGACCAACGTCGCCGACTATCGGCACGTCGCCTTCTGGCAGCGACTACGTTATTTTTGCCGCCTTTATCTGCAAAGTAGTCAGGAATTACATCGTCTGCAAAGCGGTGTAGATGATCATACCAGACTCCCACGGACATCCGGCCTGGCTCGTCATACCGATAACGCCGAAGCTATGTGGAGCGGGCTGCGTACATTTTGTACGTTGATGATGATTGGCGCATGGAGTATTGCTTCGCAATGGGATGCCGGTGCCAATGCATTAACGCTGGCAGCAATTAGCTGCGTACTCTACTCCGCCGTCGCAGCACCGTTTAAGTCGTTGTCACTTCTGATGCGCACGCTGGTGTTACTTTCGCTATTCAGCTTTGTGGTCAAATTTGGTCTGATGGTCCAGATTAGCGATCTGTGGCAATTTTTACTGTTTCTCTTTCCACTGCTGGCGACAATGCAGCTTCTTAAATTGCAGATGCCAAAATTTGCCGCATTGTGGGGGCAACTGATTGTTTTTATGGGTTCTTTTATCGCTGTCACTAATCCCCCGGTGTATGATTTTGCTGATTTTCTTAACGATAATCTGGCAAAAATCGTTGGCGTCGCGTTGGCGTGGTTAGCGTTCGCCATTCTGCGTCCAGGATCGGATGCTCGTAAAAGCCGCCGCCATATTCGCGCGCTGCGCCGGGATTTTGTCGATCAGCTAAGCCGCCATCCAACACTGAGTGAAAGCGAATTTGAATCGCTCACTTATCATCACGTCAGTCAGTTGAGTAACAGCCAGGATGCGCTGGCTCGCCGTTGGTTATTACGCTGGGGTGTAGTGCTGCTGAACTGTTCTCATGTTGTCTGGCAATTGCGCGACTGGGAATCGCGTTCCGATCCGTTATCGCGAGTACGGGATAACTGTATTTCACTGTTGCGGGGAGTGATGAGTGAGCGTGGCGTTCAGCAAAAATCACTGGCGGCCACACTTGAAGAATTACAGCGGATTTGCGACAGCCTTGCCCGTCATCATCAACCTGCCGCCCGTGAGCTGGCGGCAATTGTCTGGCGGCTGTACTGCTCGCTTTCGCAACTTGAGCAAGCACCACCGCAAGGTACGCTGGCCTCTTAA", 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"MNASSWSLRNLPWFRATLAQWRYALRNTIAMCLALTVAYYLNLDEPYWAMTSAAVVSFPTVGGVISKSLGRIAGSLLGAIAALLLAGHTLNEPWFFLLSMSAWLGFCTWACAHFTNNVAYAFQLAGYTAAIIAFPMVNITEASQLWDIAQARVCEVIVGILCGGMMMMILPSSSDATALLTALKNMHARLLEHASLLWQPETTDAIRAAHEGVIGQILTMNLLRIQAFWSHYRFRQQNARLNALLHQQLRMTSVISSLRRMLLNWPSPPGATREILEQLLTALASSQTDVYTVARIIAPLRPTNVADYRHVAFWQRLRYFCRLYLQSSQELHRLQSGVDDHTRLPRTSGLARHTDNAEAMWSGLRTFCTLMMIGAWSIASQWDAGANALTLAAISCVLYSAVAAPFKSLSLLMRTLVLLSLFSFVVKFGLMVQISDLWQFLLFLFPLLATMQLLKLQMPKFAALWGQLIVFMGSFIAVTNPPVYDFADFLNDNLAKIVGVALAWLAFAILRPGSDARKSRRHIRALRRDFVDQLSRHPTLSESEFESLTYHHVSQLSNSQDALARRWLLRWGVVLLNCSHVVWQLRDWESRSDPLSRVRDNCISLLRGVMSERGVQQKSLAATLEELQRICDSLARHHQPAARELAAIVWRLYCSLSQLEQAPPQGTLAS", - "protein_translation_length": 670, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGD1" - ], - [ - "gene_synonym", - "ECK1642" - ], - [ - "gene_synonym", - "EcoGene:EG13419" - ], - [ - "gene_synonym", - "NP_416163.1" - ], - [ - "gene_synonym", - "GeneID:945343" - ], - [ - "gene_synonym", - "b1646" - ], - [ - "gene_synonym", - "sodC" - ], - [ - "gene_synonym", - "GI:16129604" - ], - [ - "gene_synonym", - "ASAP:ABE-0005505" - ], - [ - "gene_synonym", - "JW1638" - ] - ], - "dna_sequence": "ATGAAACGTTTTAGTCTGGCTATTCTGGCGCTGGTTGTTGCAACCGGCGCACAAGCTGCCAGTGAAAAAGTCGAGATGAACCTCGTCACGTCGCAAGGGGTAGGGCAGTCAATTGGTAGCGTCACCATTACTGAAACCGATAAAGGTCTGGAGTTTTCGCCCGATCTGAAAGCATTACCCCCCGGTGAACATGGCTTCCATATTCATGCCAAAGGAAGCTGCCAGCCAGCCACCAAAGATGGCAAAGCCAGCGCCGCGGAATCCGCAGGCGGGCATCTTGATCCACAAAATACCGGTAAACATGAAGGGCCAGAAGGTGCCGGGCATTTAGGCGATCTGCCTGCACTGGTCGTCAATAATGACGGCAAAGCTACCGATGCCGTCATCGCGCCTCGTCTGAAATCACTGGATGAAATCAAAGACAAAGCGCTGATGGTCCACGTTGGCGGCGATAATATGTCCGATCAACCTAAACCGCTGGGCGGTGGCGGTGAACGCTATGCCTGTGGTGTAATTAAGTAA", - "dna_sequence_length": 522, - "functions": [ - "superoxide dismutase, Cu, Zn, periplasmic" - ], - "id": "CDS_1636", - "location": [ - [ - "NC_000913", - 1724655, - "-", - 522 - ] - ], - "md5": "ec32d2b5fd1a56ca4b617ef5dd11dcb1", - "parent_gene": "", - "protein_md5": "675fa70156ccc6aab6ccbfa67ecfaf15", - "protein_translation": "MKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTITETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPALVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSDQPKPLGGGGERYACGVIK", - "protein_translation_length": 173, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1643" - ], - [ - "gene_synonym", - "YP_025305.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76187" - ], - [ - "gene_synonym", - "ydhF" - ], - [ - "gene_synonym", - "GI:49176131" - ], - [ - "gene_synonym", - "b1647" - ], - [ - "gene_synonym", - "ASAP:ABE-0005508" - ], - [ - "gene_synonym", - "GeneID:946960" - ], - [ - "gene_synonym", - "JW1639" - ], - [ - "gene_synonym", - "EcoGene:EG13420" - ] - ], - "dna_sequence": "ATGGTTCAGCGTATTACTATTGCGCCGCAAGGCCCGGAGTTTTCCCGTTTTGTGATGGGCTACTGGCGATTGATGGACTGGAATATGTCCGCCCGCCAGCTGGTCAGTTTTATTGAAGAGCATCTGGATCTCGGCGTGACCACCGTGGACCATGCTGATATTTATGGTGGCTATCAGTGCGAAGCGGCGTTTGGCGAGGCACTGAAACTGGCACCTCACCTGCGTGAACGGATGGAAATCGTCAGTAAATGCGGTATCGCGACGACCGCGCGTGAAGAAAACGTCATTGGTCATTACATCACTGACCGCGATCACATCATTAAGAGCGCCGAACAGTCGCTAATTAATCTCGCGACCGATCATCTGGATTTGCTGTTAATCCACCGACCAGACCCGTTAATGGATGCCGATGAAGTGGCGGACGCGTTCAAACATCTGCATCAGAGCGGCAAAGTGCGTCATTTTGGCGTATCGAACTTTACGCCTGCGCAATTTGCCCTGTTGCAATCACGTCTGCCGTTTACCCTTGCCACTAATCAGGTGGAAATATCCCCGGTGCATCAGCCGTTACTGCTGGATGGCACGCTCGACCAACTACAACAACTGCGTGTTCGTCCGATGGCGTGGTCCTGCCTTGGTGGTGGTCGTCTGTTTAATGATGATTATTTCCAGCCGCTGCGTGATGAACTGGCTGTGGTGGCAGAGGAGTTAAACGCGGGCTCGATTGAACAGGTGGTTTACGCCTGGGTATTACGTTTACCATCGCAGCCGCTGCCAATTATCGGTTCAGGTAAAATTGAGCGCGTACGGGCAGCTGTCGAAGCAGAAACACTGAAAATGACCCGTCAACAATGGTTTCGTATCCGTAAAGCGGCACTGGGGTACGACGTACCGTAA", - "dna_sequence_length": 897, - "functions": [ - "putative oxidoreductase" - ], - "id": "CDS_1637", - "location": [ - [ - "NC_000913", - 1725632, - "-", - 897 - ] - ], - "md5": "1495080d6db49e5856bbd4f8972f633d", - "parent_gene": "", - "protein_md5": "260d44bed7fa8dcab1d896019c54f35a", - "protein_translation": "MVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFNDDYFQPLRDELAVVAEELNAGSIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAETLKMTRQQWFRIRKAALGYDVP", - "protein_translation_length": 298, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005510" - ], - [ - "gene_synonym", - "ECK1644" - ], - [ - "gene_synonym", - "EcoGene:EG13946" - ], - [ - "gene_synonym", - "ydhL" - ], - [ - "gene_synonym", - "NP_416165.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64474" - ], - [ - "gene_synonym", - "GI:90111312" - ], - [ - "gene_synonym", - "GeneID:946168" - ], - [ - "gene_synonym", - "b1648" - ], - [ - "gene_synonym", - "JW5827" - ] - ], - "dna_sequence": "GTGGCGGAGCAATTAGAGTTCTTTCCCGTCCAGAGCCCGTGCCGGGGAATTTGCCAGTCTGACGAACGCGGGTTTTGTCGCGGCTGTTTTCGTAGTCGTGATGAGCGTTTTAACTGGAATAAAATGAGCGATGGCGAAAAACAAGAGGTGCTGCGCCTTTGTCGGCAGCGATTAATGCGCAAATTACGCGCAAATAAGCCAGCGTCATCAGACGAACCGGAGCAACCATCACTCTTTTGA", - "dna_sequence_length": 240, - "functions": [ - "DUF1289 family protein" - ], - "id": "CDS_1638", - "location": [ - [ - "NC_000913", - 1725920, - "-", - 240 - ] - ], - "md5": "f3815d41abe314386f6a8c3d333af844", - "parent_gene": "", - "protein_md5": "7a3620078ab679ba8b98a2f717cce209", - "protein_translation": "MAEQLEFFPVQSPCRGICQSDERGFCRGCFRSRDERFNWNKMSDGEKQEVLRLCRQRLMRKLRANKPASSDEPEQPSLF", - "protein_translation_length": 79, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67430" - ], - [ - "gene_synonym", - "ECK1645" - ], - [ - "gene_synonym", - "ASAP:ABE-0005514" - ], - [ - "gene_synonym", - "ydhM" - ], - [ - "gene_synonym", - "EcoGene:EG13947" - ], - [ - "gene_synonym", - "JW5874" - ], - [ - "gene_synonym", - "nemR" - ], - [ - "gene_synonym", - "GeneID:946166" - ], - [ - "gene_synonym", - "GI:145698269" - ], - [ - "gene_synonym", - "NP_416166.3" - ], - [ - "gene_synonym", - "b1649" - ] - ], - "dna_sequence": "ATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGCCAACATGGAACCATCAGTGGTTGCCTGACAGTAAAACTCTCTGCCGAAGTGTGCGATCTGTCAGAAGATATGCGCAGCGCGATGGATAAAGGTGCTCGCGGCGTGATCGCCCTGCTCTCTCAGGCGCTGGAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAG", - "dna_sequence_length": 600, - "functions": [ - "transcriptional repressor for the nemRA-gloA operon, quinone-, glyoxal-, and HOCl-activated" - ], - "id": "CDS_1639", - "location": [ - [ - "NC_000913", - 1726023, - "+", - 600 - ] - ], - "md5": "d71da478c32e685ed1a52182eaf4baef", - "parent_gene": "", - "protein_md5": "7ef72b0bab2aa4fe67742c1012ed305f", - "protein_translation": "MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGSFYHYFRSKEAFGVAMLERHYAAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQHGTISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIALLSQALENGRENHCLTFCGEPLQQAQVLYALWLGANLQAKISRSFEPLENALAHVKNIIATPAV", - "protein_translation_length": 199, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ydhN" - ], - [ - "gene_synonym", - "ECK1646" - ], - [ - "gene_synonym", - "ASAP:ABE-0005516" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77258" - ], - [ - "gene_synonym", - "JW1642" - ], - [ - "gene_synonym", - "b1650" - ], - [ - "gene_synonym", - "GI:16129608" - ], - [ - "gene_synonym", - "GeneID:946164" - ], - [ - "gene_synonym", - "EcoGene:EG13546" - ], - [ - "gene_synonym", - "NP_416167.1" - ], - [ - "gene_synonym", - "nemA" - ] - ], - "dna_sequence": "ATGTCATCTGAAAAACTGTATTCCCCACTGAAAGTGGGCGCGATCACGGCGGCAAACCGTATTTTTATGGCACCGCTGACGCGTCTGCGCAGTATTGAACCGGGTGACATTCCTACCCCGTTGATGGCGGAATACTATCGCCAACGTGCCAGTGCCGGTTTGATTATTAGTGAAGCCACGCAAATTTCTGCCCAGGCAAAAGGATATGCAGGTGCGCCTGGCATCCATAGTCCGGAGCAAATTGCCGCATGGAAAAAAATCACCGCTGGCGTTCATGCTGAAAATGGTCATATGGCCGTGCAGCTGTGGCACACCGGACGCATTTCTCACGCCAGCCTGCAACCTGGCGGTCAGGCACCGGTAGCGCCTTCAGCACTTAGCGCGGGAACACGTACTTCTCTGCGCGATGAAAATGGTCAGGCGATCCGTGTTGAAACATCCATGCCGCGTGCGCTTGAACTGGAAGAGATTCCAGGTATCGTCAATGATTTCCGTCAGGCCATTGCTAACGCGCGTGAAGCCGGTTTTGATCTGGTAGAGCTCCACTCTGCTCACGGTTATTTGCTGCATCAGTTCCTTTCTCCTTCTTCAAACCATCGTACCGATCAGTACGGCGGCAGCGTGGAAAATCGCGCACGTTTGGTACTGGAAGTGGTCGATGCCGGGATTGAAGAATGGGGTGCCGATCGCATTGGCATTCGCGTTTCACCAATCGGTACTTTCCAGAACACAGATAACGGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGAAACGCTGATCGGCAAAGGGTTAATTGATGCGGTGGCATTTGGTCGTGACTGGATTGCGAACCCGGATCTGGTCGCCCGCTTGCAGCGCAAAGCTGAGCTTAACCCACAGCGTGCCGAAAGTTTCTACGGTGGCGGCGCGGAAGGCTATACCGATTACCCGACGTTGTAA", 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"gene_synonym", - "gloA" - ], - [ - "gene_synonym", - "b1651" - ], - [ - "gene_synonym", - "JW1643" - ], - [ - "gene_synonym", - "GI:16129609" - ], - [ - "gene_synonym", - "ASAP:ABE-0005520" - ], - [ - "gene_synonym", - "EcoGene:EG13421" - ], - [ - "gene_synonym", - "NP_416168.1" - ] - ], - "dna_sequence": "ATGCGTCTTCTTCATACCATGCTGCGCGTTGGCGATTTGCAACGCTCCATCGATTTTTATACCAAAGTGCTGGGCATGAAACTGCTGCGTACCAGCGAAAACCCGGAATACAAATACTCACTGGCGTTTGTTGGCTACGGCCCGGAAACCGAAGAAGCGGTGATTGAACTGACCTACAACTGGGGCGTGGATAAATACGAACTCGGCACTGCTTATGGTCACATCGCGCTTAGCGTAGATAACGCCGCTGAAGCGTGCGAAAAAATCCGTCAAAACGGGGGTAACGTGACCCGTGAAGCGGGTCCGGTAAAAGGCGGTACTACGGTTATCGCGTTTGTGGAAGATCCGGACGGTTACAAAATTGAGTTAATCGAAGAGAAAGACGCCGGTCGCGGTCTGGGCAACTAA", - "dna_sequence_length": 408, - "functions": [ - "glyoxalase I, Ni-dependent" - ], - "id": "CDS_1641", - "location": [ - [ - "NC_000913", - 1727837, - "+", - 408 - ] - ], - "md5": "0722e10301457dccdfaf73f79d81f680", - "parent_gene": "", - "protein_md5": "eb054aa220e7391b7116f1e08101ae67", - "protein_translation": "MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGLGN", - "protein_translation_length": 135, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946159" - ], - [ - "gene_synonym", - "ASAP:ABE-0005523" - ], - [ - "gene_synonym", - "EcoGene:EG11547" - ], - [ - "gene_synonym", - "NP_416169.1" - ], - [ - "gene_synonym", - "ECK1648" - ], - [ - "gene_synonym", - "b1652" - ], - [ - "gene_synonym", - "JW1644" - ], - [ - "gene_synonym", - "rnt" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30014" - ], - [ - "gene_synonym", - "GI:16129610" - ] - ], - "dna_sequence": "ATGTCCGATAACGCTCAACTTACCGGTCTGTGCGACCGTTTTCGTGGTTTTTATCCTGTTGTGATCGATGTTGAAACAGCCGGATTTAACGCCAAAACCGATGCGCTGCTTGAGATTGCCGCCATCACCCTGAAAATGGATGAACAAGGCTGGCTGATGCCGGACACCACATTACATTTCCACGTCGAACCATTTGTCGGCGCAAATTTGCAACCAGAAGCCCTCGCCTTCAACGGCATTGACCCGAACGATCCCGATCGCGGCGCGGTCAGCGAATACGAGGCGCTGCACGAAATTTTTAAAGTTGTACGTAAAGGTATTAAAGCGAGCGGCTGTAACCGCGCCATTATGGTGGCGCACAATGCCAATTTTGATCACAGCTTTATGATGGCCGCCGCAGAACGCGCCTCACTGAAACGTAACCCGTTCCACCCTTTCGCCACTTTTGACACTGCTGCACTGGCCGGGCTGGCACTCGGACAAACCGTATTGTCAAAGGCTTGCCAGACCGCTGGCATGGACTTCGACAGCACCCAGGCGCACTCCGCGCTGTACGACACCGAACGCACTGCTGTGCTGTTTTGTGAAATCGTCAACCGCTGGAAACGTCTGGGAGGCTGGCCGCTATCTGCCGCCGAAGAGGTGTAA", - "dna_sequence_length": 648, - "functions": [ - "RNase T", - "exoribonuclease T", - "structured DNA 3' exonuclease", - "RNA processing", - "DNA repair" - ], - "id": "CDS_1642", - "location": [ - [ - "NC_000913", - 1728347, - "+", - 648 - ] - ], - "md5": "975c7af4d5e2a5e880d750d14676aa46", - "parent_gene": "", - "protein_md5": "3b8b75ad5cd020ba6c360a123b86b45a", - "protein_translation": "MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHEIFKVVRKGIKASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALGQTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNRWKRLGGWPLSAAEEV", - "protein_translation_length": 215, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rhlF" - ], - [ - "gene_synonym", - "ECK1649" - ], - [ - "gene_synonym", - "EcoGene:EG11548" - ], - [ - "gene_synonym", - "GeneID:946156" - ], - [ - "gene_synonym", - "b1653" - ], - [ - "gene_synonym", - "lhr" - ], - [ - "gene_synonym", - "NP_416170.1" - ], - [ - "gene_synonym", - "JW1645" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30015" - ], - [ - "gene_synonym", - "ASAP:ABE-0005525" - ], - [ - "gene_synonym", - "GI:16129611" - ] - ], - "dna_sequence": "ATGGCAGATAATCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTTCTCTACGCCCTCGATCGGCTCTTCCGCGAAGGCGGCGAAGATACCCGCGAGGCGCATAAGCGTAAAACCTCACGCATCCTCTATATTTCACCGATAAAAGCCCTGGGCACCGACGTTCAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTACTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGATGCTGACCTCCCGCGCGCGCGAAACGCTACGCGGCGTCGAAACGGTAATTATTGATGAAGTCCACGCGGTAGCGGGCAGTAAACGTGGTGCGCATCTGGCGTTAAGTCTGGAGCGGCTCGATGCGCTGCTCCACACCTCAGCACAGCGAATTGGCCTTTCTGCCACTGTGCGCTCAGCCAGCGATGTGGCAGCATTTCTTGGTGGCGATCGCCCGGTTACGGTAGTCAACCCGCCCGCAATGCGCCATCCGCAGATACGAATTGTCGTACCGGTCGCCAATATGGATGATGTCTCATCGGTCGCCAGCGGCACCGGCGAAGACAGCCATGCCGGCCGGGAAGGCTCCATCTGGCCATATATTGAAACGGGTATCCTTGATGAAGTGTTGCGCCATCGCTCGACCATTGTCTTTACTAATTCGCGGGGGCTGGCGGAAAAACTGACGGCACGATTAAATGAGCTTTACGCCGCACGCTTACAGCGTTCCCCGTCTATCGCCGTTGATGCGGCCCATTTCGAGTCGACCTCCGGCGCAACCTCTAACCGTGTACAAAGTAGCGACGTTTTTATTGCCCGCTCACACCACGGCTCCGTCTCTAAAGAACAACGAGCAATCACCGAACAGGCGCTGAAATCGGGTGAATTACGCTGCGTGGTCGCAACCTCCAGTCTTGAACTGGGGATTGATATGGGCGCGGTGGATCTGGTGATTCAGGTGGCAACGCCGCTTTCTGTTGCCAGTGGGTTACAACGCATTGGTCGCGCCGGACATCAGGTTGGCGGTGTATCTAAAGGGCTGTTTTTCCCCCGTACCCGGCGTGATTTAGTCGATTCCGCAGTCATTGTAGAGTGTATGTTCGCAGGCAGGCTGGAAAACCTGACACCACCGCATAATCCTCTCGACGTCCTTGCGCAGCAAACCGTTGCCGCCGCGGCGATGGATGCATTACAGGTAGACGAATGGTACTCCCGCGTACGCCGTGCCGCACCGTGGAAAGATCTGCCAAGACGTGTTTTTGACGCCACGCTGGATATGCTTTCCGGGCGCTATCCCTCTGGCGATTTTTCTGCTTTTCGCCCCAAACTGGTCTGGAACAGGGAGACCGGGATATTGACCGCCCGACCTGGCGCTCAATTGTTGGCGGTTACCAGCGGCGGCACCATTCCGGATCGTGGCATGTATAGCGTGTTATTACCCGAAGGTGAAGAAAAGGCCGGTTCGCGGCGGGTGGGTGAACTGGATGAGGAGATGGTATATGAGTCGCGGGTGAACGACATTATCACTCTCGGCGCTACCTCATGGCGGATCCAGCAAATCACCCGCGATCAGGTGATTGTGACTCCTGCTCCGGGTCGTTCTGCCCGGCTCCCCTTCTGGCGTGGTGAAGGTAACGGACGTCCGGCTGAATTAGGCGAGATGATCGGCGATTTTCTTCATTTGCTGGCGGATGGCGCGTTCTTTTCCGGGACTATTCCCCCGTGGCTGGCAGAAGAAAATACGATCGCCAATATTCAGGGGTTGATTGAGGAGCAGCGCAACGCGACGGGCATCGTTCCGGGGAGTCGCCATCTGGTCCTCGAACGGTGCCGTGATGAAATTGGTGACTGGCGTATTATTTTGCACTCTCCCTATGGAAGACGGGTGCATGAACCCTGGGCGGTGGCGATTGCCGGGCGAATACATGCGCTATGGGGCGCTGACGCGTCGGTGGTCGCCAGTGATGACGGCATTGTTGCACGTATTCCTGACACCGATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCGGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCACCCCGCTTTGGCAACAACGGCTGCGCGCCAGTCAGTTGCTGGAAATCGCTCAGGGATATCCGGATTTTCCGGTCATTCTCGAAACCCTACGCGAATGTCTGCAAGATGTTTATGATCTTCCCGCACTGGAACGTTTGATGCGTCGCCTGAACGGTGGCGAAATTCAAATATCCGATGTAACGACCACTACGCCCTCGCCTTTCGCCACAAGTTTATTGTTCGGCTATGTCGCGGAATTTATGTACCAGAGCGACGCCCCGCTGGCAGAGCGCCGGGCATCCGTACTGTCGCTGGACAGCGAGTTACTGCGCAATCTACTCGGACAGGTCGATCCGGGGGAATTACTCGACCCGCAGGTCATTCGCCAGGTGGAAGAAGAGTTGCAACGACTGGCTCCTGGCAGAAGAGCGAAAGGTGAAGAAGGATTGTTCGACCTGCTGCGCGAACTGGGGCCAATGACCGTTGAAGACCTGGCGCAACGGCATACAGGCAGCAGTGAAGAGGTTGCGTCGTATCTGGAAAATCTTCTTGCAGTAAAACGAATCTTCCCAGCGATGATTAGCGGACAGGAGCGTCTTGCCTGTATGGATGATGCCGCCAGGCTGCGTGATGCCCTCGGCGTACGACTACCAGAGTCATTGCCAGAGATTTATTTACATAGAGTCAGTTACCCGCTTCGCGACCTCTTTCTGCGCTATCTCCGGGCTCATGCTCTGGTCACGGCTGAACAACTGGCTCATGAGTTTAGTCTCGGTATTGCCATTGTCGAAGAGCAGCTTCAGCAACTGCGTGAACAGGGTCTGGTGATGAATCTGCAACAAGACATCTGGGTGAGCGATGAAGTATTTCGTCGTCTGCGTTTGCGCTCGCTGCAAGCCGCCAGAGAAGCGACGCGTCCCGTTGCAGCCACGACCTATGCGCGATTGCTGCTGGAACGTCAGGGCGTATTACCCGCCACCGATGGTAGCCCGGCGCTCTTTGCCTCAACATCGCCAGGCGTTTATGAGGGCGTAGATGGCGTGATGCGGGTGATCGAACAGCTTGCCGGAGTCGGTTTACCCGCCTCACTCTGGGAAAGCCAGATCCTGCCTGCCCGCGTACGCGACTATTCGTCAGAAATGCTCGATGAATTACTGGCAACCGGTGCGGTTATCTGGTCGGGGCAAAAAAAACTGGGTGAAGATGACGGCCTGGTGGCACTGCATCTACAGGAATATGCTGCAGAATCGTTCACTCCCGCCGAAGCGGATCAGGCGAATCGTTCGGCGCTGCAACAAGCGATAGTCGCTGTTCTGGCTGACGGAGGAGCCTGGTTTGCACAACAAATCAGCCAACGGATACGCGACAAAATCGGCGAATCGGTTGATCTCTCTGCCCTGCAAGAGGCGTTATGGGCGCTGGTCTGGCAAGGCGTCATCACCAGCGACATTTGGGCACCGTTACGCGCCCTCACCCGCAGCAGTTCCAACGCACGCACCTCAACTCGCCGCAGTCACCGGGCTCGTCGTGGACGTCCTGTCTATGCGCAACCCGTCTCGCCGCGGGTATCTTACAACACACCAAATCTGGCTGGACGCTGGTCGTTATTGCAGGTGGAGCCACTAAACGATACCGAAAGGATGCTGGCGCTGGCGGAAAATATGCTCGACCGCTACGGCATCATCAGTCGTCAGGCGGTGATAGCCGAAAATATCCCTGGCGGGTTTCCATCGATGCAAACGCTTTGTCGAAGTATGGAAGACTCCGGGCGAATTATGCGAGGTCGTTTTGTAGAAGGTCTGGGTGGCGCGCAATTCGCTGAACGTCTGACTATTGACCGATTGCGCGATCTGGCGACACAAGCCACGCAAACGCGCCACTATACACCAGTGGCGCTCTCTGCCAACGATCCGGCTAATGTGTGGGGAAATCTTCTGCCCTGGCCTGCACATCCGGCAACGCTGGTTCCAACGCGTCGGGCGGGTGCGCTGGTGGTCGTTTCTGGCGGCAAATTGTTACTCTATCTGGCGCAAGGTGGCAAAAAAATGCTGGTCTGGCAGGAAAAAGAGGAATTACTCGCCCCAGAGGTTTTCCACGCGCTGACTACCGCACTGCGTCGCGAACCACGGCTGCGCTTTACGCTAACAGAAGTGAATGATCTACCGGTCCGGCAAACGCCGATGTTTACGCTGCTGCGTGAGGCGGGATTTTCAAGTTCGCCACAAGGGCTGGATTGGGGATAG", 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"MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVECMFAGRLENLTPPHNPLDVLAQQTVAAAAMDALQVDEWYSRVRRAAPWKDLPRRVFDATLDMLSGRYPSGDFSAFRPKLVWNRETGILTARPGAQLLAVTSGGTIPDRGMYSVLLPEGEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPFWRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTIANIQGLIEEQRNATGIVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWAVAIAGRIHALWGADASVVASDDGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGRTPGHRTPLWQQRLRASQLLEIAQGYPDFPVILETLRECLQDVYDLPALERLMRRLNGGEIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVDPGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVFRRLRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMRVIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVALHLQEYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSALQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPVSPRVSYNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTLCRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRLRDLATQATQTRHYTPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSGGKLLLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFTLLREAGFSSSPQGLDWG", - "protein_translation_length": 1538, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12181" - ], - [ - "gene_synonym", - "grxD" - ], - [ - "gene_synonym", - "ECK1650" - ], - [ - "gene_synonym", - "ydhD" - ], - [ - "gene_synonym", - "NP_416171.1" - ], - [ - "gene_synonym", - "JW1646" - ], - [ - "gene_synonym", - "b1654" - ], - [ - "gene_synonym", - "GeneID:946169" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC69" - ], - [ - "gene_synonym", - "GI:16129612" - ], - [ - "gene_synonym", - "ASAP:ABE-0005527" - ] - ], - "dna_sequence": "ATGAGCACCACTATCGAAAAAATCCAACGCCAGATTGCTGAAAACCCGATCCTGCTGTACATGAAAGGTTCACCGAAACTGCCGAGCTGCGGTTTCTCTGCCCAGGCAGTCCAGGCGCTTGCCGCATGTGGCGAACGTTTTGCCTATGTTGATATTCTGCAGAATCCGGACATTCGTGCGGAACTGCCGAAATATGCTAACTGGCCGACCTTCCCGCAACTGTGGGTTGACGGCGAGCTGGTCGGCGGTTGTGATATCGTGATCGAAATGTATCAGCGTGGCGAACTGCAGCAGCTGATCAAAGAAACTGCCGCTAAATACAAGTCTGAAGAGCCGGACGCGGAATAA", - "dna_sequence_length": 348, - "functions": [ - "glutaredoxin-4" - ], - "id": "CDS_1644", - "location": [ - [ - "NC_000913", - 1734101, - "-", - 348 - ] - ], - "md5": "f9b168d01c44255d3a23d0e58f39dd34", - "parent_gene": "", - "protein_md5": "9e5e4071a9d1b9e3765784083543f591", - "protein_translation": "MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKETAAKYKSEEPDAE", - "protein_translation_length": 115, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76190" - ], - [ - "gene_synonym", - "ydhO" - ], - [ - "gene_synonym", - "GeneID:945210" - ], - [ - "gene_synonym", - "EcoGene:EG13949" - ], - [ - "gene_synonym", - "JW5270" - ], - [ - "gene_synonym", - "mepH" - ], - [ - "gene_synonym", - "ECK1651" - ], - [ - "gene_synonym", - "b1655" - ], - [ - "gene_synonym", - "ASAP:ABE-0005533" - ], - [ - "gene_synonym", - "NP_416172.1" - ], - [ - "gene_synonym", - "GI:16129613" - ] - ], - "dna_sequence": "GTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGCTACCACTCATATCACCAAAAAAGCAGATAAAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAACAGCGAAAAAAGCCGCCAGTAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAAACGTAAGGGCTATAAATCGCATTGTGTGAAAGTCAAAAATGCCGCGTCAGGAACTCTTGCCGACGCGCACAAAGCGAAGGTGCAAAAAGCTACGAAAGTGGCAATGAATAAACTGATGCAGCAAATTGGTAAGCCATATCGTTGGGGTGGCAGCTCACCGCGTACCGGTTTTGATTGCAGCGGCCTGGTTTATTACGCTTATAAAGATTTGGTGAAAATTCGTATTCCGCGTACGGCGAATGAAATGTATCACCTGCGTGATGCAGCGCCAATCGAACGTAGTGAACTGAAAAACGGCGACCTGGTCTTTTTCCGTACTCAGGGACGCGGCACAGCCGATCATGTCGGCGTGTATGTCGGCAACGGCAAATTTATTCAGTCACCGCGCACAGGTCAGGAAATTCAAATCACTTCTCTCAGTGAAGACTACTGGCAGCGCCACTATGTTGGCGCTCGTCGGGTAATGACCCCAAAAACACTTCGCTAA", - "dna_sequence_length": 816, - "functions": [ - "murein DD-endopeptidase, space-maker hydrolase" - ], - "id": "CDS_1645", - "location": [ - [ - "NC_000913", - 1734435, - "+", - 816 - ] - ], - "md5": "4cb00f26b65f937216f22933a594752c", - "parent_gene": "", - "protein_md5": "81ca912a28abc180aa1b1ca430b41fb0", - "protein_translation": "MARINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKADKKKSTATTKKTQKTAKKAASKSTTKSKTASSVKKSSITASKNAKTRSKHAVNKTASASFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGGSSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRTGQEIQITSLSEDYWQRHYVGARRVMTPKTLR", - "protein_translation_length": 271, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416173.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGD3" - ], - [ - "gene_synonym", - "ECK1652" - ], - [ - "gene_synonym", - "sodB" - ], - [ - "gene_synonym", - "GeneID:944953" - ], - [ - "gene_synonym", - "b1656" - ], - [ - "gene_synonym", - "JW1648" - ], - [ - "gene_synonym", - "GI:16129614" - ], - [ - "gene_synonym", - "ASAP:ABE-0005537" - ], - [ - "gene_synonym", - "EcoGene:EG10954" - ] - ], - "dna_sequence": "ATGTCATTCGAATTACCTGCACTACCATATGCTAAAGATGCTCTGGCACCGCACATTTCTGCGGAAACCATCGAGTATCACTACGGCAAGCACCATCAGACTTATGTCACTAACCTGAACAACCTGATTAAAGGTACCGCGTTTGAAGGTAAATCACTGGAAGAGATTATTCGCAGCTCTGAAGGTGGCGTATTCAACAACGCAGCTCAGGTCTGGAACCATACTTTCTACTGGAACTGCCTGGCACCGAACGCCGGTGGCGAACCGACTGGAAAAGTCGCTGAAGCTATCGCCGCATCTTTTGGCAGCTTTGCCGATTTCAAAGCGCAGTTTACTGATGCAGCGATCAAAAACTTTGGTTCTGGCTGGACCTGGCTGGTGAAAAACAGCGATGGCAAACTGGCTATCGTTTCAACCTCTAACGCGGGTACTCCGCTGACCACCGATGCGACTCCGCTGCTGACCGTTGATGTCTGGGAACACGCTTATTACATCGACTATCGCAATGCACGTCCTGGCTATCTGGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAA", - "dna_sequence_length": 582, - "functions": [ - "superoxide dismutase, Fe" - ], - "id": "CDS_1646", - "location": [ - [ - "NC_000913", - 1735378, - "+", - 582 - ] - ], - "md5": "a202fbbabe2407944eeb80fd88836ccc", - "parent_gene": "", - "protein_md5": "ce422a1e705d91080141d9bb318b50ce", - "protein_translation": "MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA", - "protein_translation_length": 193, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ydhP" - ], - [ - "gene_synonym", - "NP_416174.1" - ], - [ - "gene_synonym", - "ECK1653" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77389" - ], - [ - "gene_synonym", - "EcoGene:EG13950" - ], - [ - "gene_synonym", - "b1657" - ], - [ - "gene_synonym", - "GI:16129615" - ], - [ - "gene_synonym", - "JW1649" - ], - [ - "gene_synonym", - "ASAP:ABE-0005540" - ], - [ - "gene_synonym", - "GeneID:947340" - ] - ], - "dna_sequence": "ATGAAAATTAACTATCCGTTGCTGGCGCTGGCGATTGGCGCGTTTGGTATCGGGACAACGGAGTTCTCGCCAATGGGCTTGTTGCCCGTCATTGCGCGCGGTGTGGATGTCTCGATTCCCGCTGCCGGAATGTTAATCAGTGCCTATGCAGTTGGCGTAATGGTTGGCGCGCCGCTGATGACGCTTCTACTTTCTCATCGTGCCCGCCGCAGTGCGTTGATTTTCCTGATGGCAATTTTCACGCTCGGCAACGTACTTTCCGCCATCGCGCCGGATTATATGACCCTGATGCTTTCACGCATTTTGACCAGCCTGAATCACGGAGCATTTTTTGGTTTGGGTTCAGTCGTGGCCGCAAGCGTGGTGCCAAAACATAAACAGGCCAGCGCAGTTGCCACTATGTTTATGGGGTTAACCCTGGCAAATATCGGTGGCGTGCCGGCGGCGACCTGGTTGGGTGAAACCATCGGCTGGCGGATGTCATTTCTGGCAACGGCGGGGCTGGGAGTGATTTCAATGGTAAGTCTGTTCTTCTCATTACCTAAAGGTGGTGCAGGGGCACGACCTGAAGTGAAAAAAGAGCTGGCGGTATTAATGCGTCCGCAGGTGCTGTCTGCATTGCTGACGACGGTACTGGGAGCTGGTGCAATGTTTACTCTCTACACCTATATCTCTCCGGTACTGCAAAGTATTACCCACGCAACACCGGTGTTCGTCACGGCAATGCTGGTGCTGATTGGTGTCGGATTCTCTATCGGTAACTATCTCGGCGGCAAACTGGCAGATCGTTCAGTTAACGGCACGTTGAAAGGCTTTTTGTTGTTGTTGATGGTGATTATGCTGGCAATCCCGTTCCTGGCCCGCAATGAGTTCGGCGCAGCTATTAGCATGGTGGTGTGGGGCGCAGCAACCTTTGCGGTCGTACCGCCGTTACAGATGCGCGTGATGCGTGTCGCCAGTGAAGCGCCAGGTCTGTCTTCATCAGTCAATATTGGTGCCTTTAATCTTGGAAATGCGCTGGGAGCAGCTGCTGGTGGTGCGGTAATTTCCGCTGGGCTGGGATACAGCTTTGTGCCGGTGATGGGAGCGATTGTCGCGGGACTGGCATTATTGCTGGTGTTTATGTCAGCCAGAAAACAACCTGAAACAGTTTGCGTTGCTAACAGCTAA", 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[ - "gene_synonym", - "ECK4411" - ], - [ - "gene_synonym", - "GeneID:5061505" - ], - [ - "gene_synonym", - "GI:145698270" - ], - [ - "gene_synonym", - "ynhF" - ] - ], - "dna_sequence": "ATGAGCACCGACCTTAAATTTTCACTGGTAACAACGATTATCGTCCTCGGTTTGATCGTAGCCGTGGGTTTGACTGCCGCGCTGCACTGA", - "dna_sequence_length": 90, - "functions": [ - "stress response membrane" - ], - "id": "CDS_1648", - "location": [ - [ - "NC_000913", - 1737545, - "-", - 90 - ] - ], - "md5": "e3f3c0777ba9f2ac2ce1599d205473a5", - "parent_gene": "", - "protein_md5": "d24a83df46eab571036c92ffce47a289", - "protein_translation": "MSTDLKFSLVTTIIVLGLIVAVGLTAALH", - "protein_translation_length": 29, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10800" - ], - [ - "gene_synonym", - "purR" - ], - [ - "gene_synonym", - "GeneID:945226" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACP7" - ], - [ - "gene_synonym", - "ECK1654" - ], - [ - "gene_synonym", - "ASAP:ABE-0005545" - ], - [ - "gene_synonym", - "JW1650" - ], - [ - "gene_synonym", - "NP_416175.1" - ], - [ - "gene_synonym", - "GI:16129616" - ], - [ - "gene_synonym", - "b1658" - ] - ], - "dna_sequence": "ATGGCAACAATAAAAGATGTAGCGAAACGAGCAAACGTTTCCACTACAACTGTGTCACACGTGATCAACAAAACACGTTTCGTCGCTGAAGAAACGCGCAACGCCGTGTGGGCAGCGATTAAAGAATTACACTACTCCCCTAGCGCGGTGGCGCGTAGCCTGAAGGTTAACCACACCAAGTCTATCGGTTTGCTGGCGACCAGCAGCGAAGCGGCCTATTTTGCCGAGATCATTGAAGCAGTTGAAAAAAATTGCTTCCAGAAAGGTTACACCCTGATTCTGGGCAATGCGTGGAACAATCTTGAGAAACAGCGGGCTTATCTGTCGATGATGGCGCAAAAACGCGTCGATGGTCTGCTGGTGATGTGTTCTGAGTACCCAGAGCCGTTGCTGGCGATGCTGGAAGAGTATCGCCATATCCCAATGGTGGTCATGGACTGGGGTGAAGCAAAAGCTGACTTCACCGATGCGGTCATTGATAACGCGTTCGAAGGCGGCTACATGGCCGGGCGTTATCTGATTGAACGCGGTCACCGCGAAATCGGCGTCATCCCCGGCCCGCTGGAACGTAACACCGGCGCAGGCCGCCTTGCCGGTTTTATGAAGGCGATGGAAGAAGCGATGATCAAGGTGCCGGAAAGCTGGATTGTGCAGGGTGACTTTGAACCTGAATCCGGTTATCGCGCCATGCAGCAAATCCTGTCGCAGCCGCATCGCCCTACTGCCGTCTTCTGTGGTGGCGATATCATGGCAATGGGCGCACTTTGTGCTGCTGATGAAATGGGCCTGCGCGTCCCGCAGGATGTTTCGCTGATCGGTTATGATAACGTGCGCAACGCGCGCTATTTTACGCCGGCGCTGACCACGATCCATCAGCCAAAAGATTCGCTGGGTGAAACAGCGTTCAACATGCTGTTGGATCGTATCGTCAACAAACGTGAAGAACCGCAGTCTATTGAAGTGCATCCGCGCTTGATTGAACGCCGCTCCGTGGCTGACGGCCCGTTCCGCGACTATCGTCGTTAA", 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"gene_synonym", - "JW1651" - ], - [ - "gene_synonym", - "NP_416176.1" - ], - [ - "gene_synonym", - "GeneID:945208" - ], - [ - "gene_synonym", - "EcoGene:EG12140" - ], - [ - "gene_synonym", - "b1659" - ] - ], - "dna_sequence": "ATGTGGTCAGAATATTCACTCGAAGTTGTTGATGCGGTAGCGCGTAATGGTAGTTTTAGCGCTGCGGCACAGGAGCTGCATCGCGTTCCTTCTGCGGTCAGCTATACCGTGCGTCAGCTGGAAGAGTGGCTGGCGGTGCCGCTCTTTGAACGACGGCACCGTGATGTGGAGCTGACCGCTGCTGGAGCGTGGTTTCTCAAAGAAGGGCGCTCTGTTGTCAAAAAAATGCAGATCACCCGCCAGCAATGTCAGCAGATAGCGAACGGCTGGCGCGGTCAGTTAGCTATCGCAGTGGATAATATTGTCAGGCCAGAACGTACACGGCAGATGATCGTTGATTTTTATCGCCATTTTGATGATGTCGAACTTCTTGTCTTTCAGGAAGTGTTCAACGGTGTCTGGGATGCGCTTTCCGACGGGCGCGTGGAACTGGCGATTGGCGCAACACGCGCGATTCCGGTAGGCGGTCGTTATGCCTTCCGGGATATGGGGATGCTAAGCTGGAGTTGCGTTGTTGCCAGTCACCACCCGCTGGCGTTGATGGATGGCCCGTTCAGCGATGATACGTTGCGCAACTGGCCGTCGTTGGTGCGCGAAGACACCTCGCGAACGCTACCTAAACGTATTACCTGGTTGCTGGATAACCAAAAAAGAGTTGTCGTGCCTGACTGGGAATCATCGGCAACCTGTATCTCGGCAGGATTATGCATAGGGATGGTGCCAACACATTTCGCCAAACCGTGGCTTAATGAGGGGAAGTGGGTAGCATTAGAACTGGAAAACCCCTTTCCGGATTCGGCATGTTGTCTGACATGGCAGCAAAATGATATGTCGCCTGCGTTAACCTGGTTGCTTGAGTATCTCGGCGATAGTGAGACGCTGAATAAGGAGTGGCTGCGGGAGCCGGAAGAGACTCCCGCAACGGGTGATTAA", - "dna_sequence_length": 933, - "functions": [ - "LysR family putative transcriptional regulator" - ], - "id": "CDS_1650", - "location": [ - [ - "NC_000913", - 1739798, - "-", - 933 - ] - ], - "md5": "79ed377b6016a82ed21b6601f1dfea7c", - "parent_gene": "", - "protein_md5": "0eed03ff499fcc5d2f9d6c4e4d9fc8bc", - "protein_translation": "MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD", - "protein_translation_length": 310, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12141" - ], - [ - "gene_synonym", - "ydhC" - ], - [ - "gene_synonym", - "ASAP:ABE-0005551" - ], - [ - "gene_synonym", - "GI:49176132" - ], - [ - "gene_synonym", - "ECK1656" - ], - [ - "gene_synonym", - "JW1652" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37597" - ], - [ - "gene_synonym", - "b1660" - ], - [ - "gene_synonym", - "GeneID:946077" - ], - [ - "gene_synonym", - "YP_025306.1" - ] - ], - "dna_sequence": "ATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACCGATATGTATCTGCCTGCTTTCGCCGCCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGTCTGTTCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCGCTCTCCGACCGTTATGGTCGTAAACCGGTATTATTAATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCTGTGGGTAGAAAACGCCGCTACGCTGCTGGTATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCTTCACAGAAAGTTAACCGTATTTTTGCGGCCATCATGCCGCTGGTGGGTCTATCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGTTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACCGACCTGCTACGTTCTAAAACCTATCGCGGCAACGTGCTGATATACGCAGCCTGTTCAGCCAGTTTTTTTGCATGGCTGACCGGTTCACCGTTCATCCTTAGTGAAATGGGCTACAGCCCGGCAGTTATTGGTTTAAGTTATGTCCCGCAAACTATCGCGTTTCTGATTGGTGGTTATGGCTGTCGCGCCGCGCTGCAGAAATGGCAAGGCAAGCAGTTATTACCGTGGTTGCTGGTGCTGTTTGCTGTCAGCGTCATTGCGACCTGGGCTGCGGGCTTCATTAGCCATGTGTCGCTGGTCGAAATCCTGATCCCATTCTGTGTGATGGCGATTGCCAATGGCGCGATCTACCCTATTGTTGTCGCCCAGGCGCTGCGTCCCTTCCCACACGCAACTGGTCGCGCCGCAGCGTTGCAGAACACTCTTCAACTGGGTCTGTGCTTCCTCGCAAGTCTGGTAGTTTCCTGGCTGATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCATAGCGAATCACACTGA", 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], - [ - "gene_synonym", - "ECK1657" - ], - [ - "gene_synonym", - "NP_416178.1" - ], - [ - "gene_synonym", - "cfa" - ], - [ - "gene_synonym", - "JW1653" - ], - [ - "gene_synonym", - "GI:16129619" - ], - [ - "gene_synonym", - "b1661" - ], - [ - "gene_synonym", - "GeneID:944811" - ] - ], - "dna_sequence": "ATGAGTTCATCGTGTATAGAAGAAGTCAGTGTACCGGATGACAACTGGTACCGTATCGCCAACGAATTACTTAGCCGTGCCGGTATAGCCATTAACGGTTCTGCCCCGGCGGATATTCGTGTGAAAAACCCCGATTTTTTTAAACGCGTTCTGCAAGAAGGCTCTTTGGGGTTAGGCGAAAGTTATATGGATGGCTGGTGGGAATGTGACCGACTGGATATGTTTTTTAGCAAAGTCTTACGCGCAGGTCTCGAGAACCAACTCCCCCATCATTTCAAAGACACGCTGCGTATTGCCGGCGCTCGTCTCTTCAATCTGCAGAGTAAAAAACGTGCCTGGATAGTCGGCAAAGAGCATTACGATTTGGGTAATGACTTGTTCAGCCGCATGCTTGATCCCTTCATGCAATATTCCTGCGCTTACTGGAAAGATGCCGATAATCTGGAATCTGCCCAGCAGGCGAAGCTCAAAATGATTTGTGAAAAATTGCAGTTAAAACCAGGGATGCGCGTACTGGATATTGGCTGCGGCTGGGGCGGACTGGCACACTACATGGCATCTAATTATGACGTAAGCGTGGTGGGCGTCACCATTTCTGCCGAACAGCAAAAAATGGCTCAGGAACGCTGTGAAGGCCTGGATGTCACCATTTTGCTGCAAGATTATCGTGACCTGAACGACCAGTTTGATCGTATTGTTTCTGTGGGGATGTTCGAGCACGTCGGACCGAAAAATTACGATACCTATTTTGCGGTGGTGGATCGTAATTTGAAACCGGAAGGCATATTCCTGCTCCATACTATCGGTTCGAAAAAAACCGATCTGAATGTTGATCCCTGGATTAATAAATATATTTTTCCGAACGGTTGCCTGCCCTCTGTACGCCAGATTGCTCAGTCCAGCGAACCCCACTTTGTGATGGAAGACTGGCATAACTTCGGTGCTGATTACGATACTACGTTGATGGCGTGGTATGAACGATTCCTCGCCGCATGGCCAGAAATTGCGGATAACTATAGTGAACGCTTTAAACGAATGTTTACCTATTATCTGAATGCCTGTGCAGGTGCTTTCCGCGCCCGTGATATTCAGCTCTGGCAGGTCGTGTTCTCACGCGGTGTTGAAAACGGCCTTCGAGTGGCTCGCTAA", 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], - [ - "gene_synonym", - "EcoGene:EG11406" - ], - [ - "gene_synonym", - "GeneID:945848" - ], - [ - "gene_synonym", - "JW1654" - ], - [ - "gene_synonym", - "GI:16129620" - ], - [ - "gene_synonym", - "ribC" - ], - [ - "gene_synonym", - "ribE" - ], - [ - "gene_synonym", - "b1662" - ] - ], - "dna_sequence": "ATGTTTACGGGGATTGTACAGGGCACCGCAAAACTGGTGTCGATTGACGAGAAACCAAATTTTCGTACGCATGTGGTGGAGTTACCCGACCACATGCTGGACGGCCTGGAAACCGGTGCTTCCGTGGCGCATAACGGTTGCTGCCTGACCGTGACGGAAATTAACGGCAACCATGTCAGTTTTGACCTGATGAAAGAAACGTTACGCATTACCAATCTTGGCGATTTAAAAGTGGGGGATTGGGTAAACGTTGAGCGTGCGGCGAAATTCAGTGATGAAATTGGCGGACACTTAATGTCAGGTCATATTATGACCACTGCTGAAGTGGCGAAAATATTAACCTCAGAAAATAATCGCCAGATCTGGTTTAAAGTCCAGGATAGTCAGTTGATGAAATATATTCTGTACAAAGGATTTATTGGCATCGACGGTATTAGCCTGACCGTCGGCGAAGTCACGCCAACGCGTTTTTGCGTCCATTTAATTCCGGAAACACTGGAACGCACGACTCTTGGGAAGAAAAAACTTGGCGCACGCGTCAACATTGAAATCGATCCACAAACTCAGGCAGTGGTAGATACGGTAGAACGTGTGCTGGCGGCACGAGAAAATGCCATGAATCAACCAGGCACAGAAGCCTGA", - "dna_sequence_length": 642, - "functions": [ - "riboflavin synthase, alpha subunit" - ], - "id": "CDS_1653", - "location": [ - [ - "NC_000913", - 1743242, - "-", - 642 - ] - ], - "md5": "1e4b55d5068622ca9d3252d7530394e5", - "parent_gene": "", - "protein_md5": "ba36ec06b78cd67ac2924910795c560c", - "protein_translation": "MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA", - "protein_translation_length": 213, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_025307.1" - ], - [ - "gene_synonym", - "GeneID:945883" - ], - [ - "gene_synonym", - "ASAP:ABE-0005561" - ], - [ - "gene_synonym", - "EcoGene:EG12400" - ], - [ - "gene_synonym", - "ECK1659" - ], - [ - "gene_synonym", - "ydhE" - ], - [ - "gene_synonym", - "GI:49176133" - ], - [ - "gene_synonym", - "JW1655" - ], - [ - "gene_synonym", - "norE" - ], - [ - "gene_synonym", - "mdtK" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37340" - ], - [ - "gene_synonym", - "b1663" - ], - [ - "gene_synonym", - "norM" - ] - ], - "dna_sequence": "GTGCAGAAGTATATCAGTGAAGCGCGTCTGTTATTAGCATTAGCAATCCCGGTGATTCTCGCGCAAATCGCCCAAACTGCGATGGGTTTTGTCGATACCGTGATGGCGGGCGGCTATAGTGCCACCGACATGGCGGCGGTCGCTATCGGTACTTCTATCTGGCTTCCGGCGATCCTCTTTGGTCACGGACTGCTGCTGGCATTAACGCCGGTTATCGCGCAATTAAATGGTTCCGGTCGACGTGAGCGCATTGCGCATCAGGTGCGACAAGGTTTCTGGCTGGCAGGTTTTGTTTCCGTTCTCATTATGCTGGTGCTGTGGAATGCAGGTTACATTATCCGCTCCATGGAAAACATCGATCCGGCTCTGGCGGACAAAGCCGTGGGTTATCTGCGTGCGTTGTTGTGGGGCGCGCCGGGATATCTGTTCTTCCAGGTTGCCCGTAACCAGTGTGAAGGTCTGGCAAAAACCAAGCCGGGTATGGTAATGGGCTTTATCGGCCTGCTGGTGAACATCCCGGTGAACTATATCTTTATTTATGGTCATTTCGGTATGCCTGAGCTCGGTGGCGTTGGTTGTGGCGTGGCTACTGCGGCGGTGTATTGGGTCATGTTCCTTGCCATGGTTTCTTACATTAAACGCGCCCGCTCCATGCGCGATATTCGTAACGAAAAAGGCACCGCAAAACCCGATCCTGCGGTTATGAAACGACTGATTCAACTCGGTTTGCCGATTGCGCTGGCACTGTTCTTTGAAGTGACACTGTTTGCCGTCGTGGCTCTGTTAGTGTCTCCGCTCGGTATTGTTGATGTCGCAGGACACCAGATTGCCCTGAACTTTAGTTCACTAATGTTCGTGCTTCCAATGTCGCTGGCGGCAGCGGTAACTATCCGCGTAGGTTATCGTCTGGGTCAGGGCTCAACGCTGGATGCGCAAACCGCTGCGCGGACCGGGCTTATGGTGGGTGTCTGTATGGCAACCCTGACGGCCATTTTCACGGTTTCACTGCGGGAGCAAATCGCCCTGTTGTACAACGACAATCCCGAGGTTGTAACGCTGGCTGCGCATTTGATGTTGCTGGCGGCGGTATATCAGATTTCTGACTCAATCCAGGTGATTGGCAGTGGGATTTTGCGTGGTTATAAAGATACGCGTTCCATTTTCTATATTACCTTTACGGCTTACTGGGTGCTGGGCTTGCCAAGCGGCTATATTCTGGCACTGACCGATCTGGTCGTTGAACCTATGGGGCCAGCAGGCTTCTGGATAGGCTTTATTATTGGCCTGACGTCGGCAGCCATTATGATGATGTTGCGTATGCGGTTCCTGCAACGTCTGCCGTCAGCCATCATTCTGCAACGAGCATCCCGCTAA", - "dna_sequence_length": 1374, - "functions": [ - "multidrug efflux system transporter" - ], - "id": "CDS_1654", - "location": [ - [ - "NC_000913", - 1743457, - "+", - 1374 - ] - ], - "md5": "9053bac41b6fb84dc375dcc89e91b2c3", - "parent_gene": "", - "protein_md5": "bfff930e747c9ec095c3fc7fc7525d37", - "protein_translation": "MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSAIILQRASR", - "protein_translation_length": 457, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13951" - ], - [ - "gene_synonym", - "NP_416181.1" - ], - [ - "gene_synonym", - "ECK1660" - ], - [ - "gene_synonym", - "ASAP:ABE-0005563" - ], - [ - "gene_synonym", - "GeneID:944851" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77552" - ], - [ - "gene_synonym", - "GI:16129622" - ], - [ - "gene_synonym", - "JW1656" - ], - [ - "gene_synonym", - "ydhQ" - ], - [ - "gene_synonym", - "b1664" - ] - ], - "dna_sequence": "ATGGGATCTGATGCGAAAAACTTGATGAGCGACGGGAACGTGCAAATTGTTAAGACCGGCGAGGTCATTGGCGCGACGCAACTTACTGAAGGCGAGTTGATTGTTGAAGCTGGCGGAAGAGCCGAAAATACCGTGGTCACGGGGGCTGGCTGGTTGAAAGTGGCAACCGGTGGGATCGCCAAATGCACACAGTACGGTAACAATGGCACGCTATCGGTCAGCGATGGTGCCATTGCCACAGATATTGTTCAGTCCGAGGGAGGCGCAATTAGTCTCTCTACGCTCGCTACGGTTAATGGCCGCCATCCCGAAGGTGAATTCAGCGTTGATAAAGGTTATGCCTGCGGTTTGTTGCTGGAAAATGGCGGTAACCTGCGTGTACTGGAAGGACATCGCGCGGAAAAAATCATTCTCGATCAAGAGGGCGGCCTGTTGGTTAATGGGACAACCTCAGCGGTCGTGGTAGATGAAGGTGGTGAATTGTTGGTGTATCCAGGTGGGGAAGCCAGCAATTGTGAGATTAATCAGGGCGGCGTTTTTATGCTGGCCGGGAAAGCCAGTGATACGTTGCTTGCTGGTGGCACCATGAATAATCTCGGTGGTGAAGACTCTGACACTATTGTTGAGAATGGATCCATTTATCGTCTGGGGACGGATGGCCTTCAGCTCTACAGTTCCGGTAAGACGCAAAACCTGTCCGTGAATGTGGGTGGTCGGGCTGAAGTGCATGCCGGTACGCTGGAAAACGCGGTAATACAAGGTGGGACAGTGATCCTGTTGTCACCCACCAGCGCGGACGAAAATTTTGTCGTAGAGGAAGATCGCGCACCGGTTGAACTGACCGGGAGTGTTGCATTACTGGACGGCGCTTCAATGATTATTGGTTATGGCGCAGAGCTGCAACAATCAACGATTACTGTACAGCAGGGCGGTGTGTTGATTCTAGACGGCAGTACGGTAAAAGGTGACAGTGTCACTTTCATTGTTGGTAACATCAATCTGAATGGTGGAAAACTGTGGCTGATCACTGATGCGGCAACGCATGTGCAACTGAAAGTGAAACGCCTGCGCGGAGAGGGAGCGATTTGCCTGCAAACCAGTGCAAAAGAAATTTCACCTGACTTCATCAATGTGAAAGGGGAAGTTACCGGGGATATACACGTTGAGATAACAGATGCCAGTCGGCAAACTCTGTGTAACGCTCTGAAATTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAA", 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- ], - [ - "gene_synonym", - "GI:16129623" - ], - [ - "gene_synonym", - "JW1657" - ], - [ - "gene_synonym", - "ydhR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACX3" - ], - [ - "gene_synonym", - "GeneID:946177" - ], - [ - "gene_synonym", - "b1667" - ] - ], - "dna_sequence": "ATGGCAACTTTGTTACAACTTCATTTTGCTTTTAATGGCCCATTTGGCGACGCAATGGCTGAGCAGCTTAAACCACTTGCTGAGTCGATTAATCAGGAACCTGGTTTTCTGTGGAAGGTATGGACAGAAAGTGAAAAGAACCACGAAGCCGGTGGGATCTACCTTTTCACTGATGAAAAAAGCGCCCTTGCCTATCTGGAAAAACATACTGCCCGACTGAAAAATCTCGGCGTTGAGGAAGTTGTCGCCAAAGTTTTCGATGTCAATGAGCCACTTAGTCAAATCAATCAGGCAAAACTCGCCTGA", - "dna_sequence_length": 306, - "functions": [ - "putative monooxygenase" - ], - "id": "CDS_1656", - "location": [ - [ - "NC_000913", - 1746700, - "+", - 306 - ] - ], - "md5": "e3e220fb578013c4a4da16f78133bdb1", - "parent_gene": "", - "protein_md5": "3d5216708170fb6b28e34ff38f616c53", - "protein_translation": "MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA", - "protein_translation_length": 101, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13953" - ], - [ - "gene_synonym", - "ASAP:ABE-0005575" - ], - [ - "gene_synonym", - "ECK1664" - ], - [ - "gene_synonym", - "GeneID:945786" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77148" - ], - [ - "gene_synonym", - "b1668" - ], - [ - "gene_synonym", - "GI:16129624" - ], - [ - "gene_synonym", - "NP_416183.1" - ], - [ - "gene_synonym", - "ydhS" - ], - [ - "gene_synonym", - "JW1658" - ] - ], - "dna_sequence": "ATGAAAAAAATTGCTATTGTGGGTGCCGGGCCTACGGGGATCTACACCTTATTCTCGCTTCTACAGCAACAAACTCCACTTTCTATTTCTATCTTCGAGCAGGCTGACGAGGCCGGTGTCGGGATGCCATACAGTGATGAGGAAAACTCAAAAATGATGCTGGCAAATATTGCCAGTATTGAAATACCGCCGATTTATTGTACGTATCTCGAATGGCTACAAAAGCAAGAAGACAGCCATCTCCAGCGTTATGGCGTTAAAAAAGAAACCTTGCACGATCGTCAGTTTTTACCGCGAATTCTGCTGGGCGAATATTTCCGCGATCAATTTTTACGACTAGTAGACCAGGCACGACAGCAAAAATTTGCAGTGGCTGTTTATGAATCATGCCAGGTTACCGATCTGCAAATTACAAATGCTGGCGTCATGCTCGCTACAAATCAGGATTTACCCAGCGAGACGTTTGATTTAGCGGTGATCGCCACGGGTCACGTCTGGCCTGATGAAGAAGAAGCAACCCGAACGTATTTTCCCAGCCCGTGGTCAGGCCTGATGGAAGCAAAGGTCGATGCGTGTAACGTGGGTATTATGGGAACATCCTTGAGCGGACTGGATGCGGCAATGGCAGTGGCTATTCAGCATGGTTCGTTCATTGAAGATGATAAACAACACGTCGTTTTTCACCGCGATAACGCAAGTGAAAAGCTAAATATCACGTTGTTGTCGCGCACGGGTATTTTACCCGAAGCCGATTTCTATTGCCCTATTCCCTACGAGCCCTTACACATCGTCACCGATCAGGCATTAAATGCTGAGATTCAAAAAGGCGAAGAGGGCCTTTTGGATCGGGTATTTAGATTGATAGTAGAGGAAATCAAGTTTGCTGATCCAGACTGGAGTCAACGCATAGCCTTAGAGAGCCTGAATGTCGATTCCTTTGCTCAAGCCTGGTTTGCCGAGCGCAAACAACGCGACCCATTTGACTGGGCAGAAAAAAATCTCCAGGAAGTCGAACGCAATAAACGAGAAAAACATACTGTTCCCTGGCGTTATGTCATTCTGCGCCTGCATGAAGCCGTACAGGAAATTGTTCCACATCTGAATGAACACGACCATAAACGGTTCAGTAAAGGCCTTGCCCGGGTTTTCATCGATAATTATGCGGCAATCCCTTCAGAGTCTATTCGTCGCCTACTTGCCTTACGTGAAGCGGGAATCATTCATATTCTCGCCCTCGGTGAAGACTACAAAATGGAAATTAATGAGTCGCGCACCGTCCTGAAAACGGAAGACAACAGCTACTCGTTTGACGTTTTTATTGATGCCCGCGGACAACGTCCGCTTAAAGTGAAAGATATCCCTTTCCCTGGGCTACGCGAGCAATTACAGAAAACAGGGGATGAAATCCCTGATGTTGGCGAAGATTATACGTTACAGCAACCCGAAGATATTCGTGGGCGCGTAGCGTTCGGCGCGTTGCCCTGGTTGATGCACGACCAGCCTTTCGTTCAGGGACTTACGGCATGTGCAGAAATTGGTGAGGCGATGGCTCGGGCGGTCGTAAAGCCTGCATCCCGTGCTCGTCGGCGTCTTTCGTTTGATTAA", 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"GeneID:945960" - ], - [ - "gene_synonym", - "ECK1665" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77147" - ], - [ - "gene_synonym", - "NP_416184.1" - ], - [ - "gene_synonym", - "EcoGene:EG13954" - ], - [ - "gene_synonym", - "b1669" - ], - [ - "gene_synonym", - "GI:16129625" - ], - [ - "gene_synonym", - "JW1659" - ], - [ - "gene_synonym", - "ydhT" - ] - ], - "dna_sequence": "ATGATCATTACACAAGCAGACCTGCGAGAATGGCGTATCGGAGCGGTGATGTATCGCTGGTTCCTGCGCCATTTCCCACGCGGCGGTAGTTATGCCGATATTCATCATGCACTGATTGAGGAAGGATATACGGACTGGGCGGAGAGTCTGGTTGAGTATGCGTGGAAAAAATGGCTGGCGGATGAAAACTTCGCGCATCAGGAAGTTTCCTCTATGCAAAAACTGGCCACAGACCCCGGAGAGAGACCATTTTGCAGTCAGTTTGCCCGCAGCGACGATCATGCTCGCATCGGCTGTTGTGAGGATAACGCCAGAATCGCAACCGCTGGGTATGCCGCGCAAATTGCCAGTATGGGTTATAGCGTGCGGATTGGAAGTGTCGGCTTTAACAGTCACATTGGCAGCTCCGGTGAACGCGCACGGGTTGCTGTAACCGGTAATTCTTCGCGGATAAGCAGCGCTGGAGATAGCAGTCGGATTGCGAATACCGGAATGCGAGTACGCGTTTGTACATTGGGTGAACGGTGTCATGTCGCCAGTAATGGTGACCTGGTGCAAATCGCCAGCTTTGGCGCAAACGCCAGAATTGCCAACAGCGGCGACAATGTACACATCATTGCCAGCGGTGAAAATTCAACGGTAGTGAGCACGGGCGTGGTCGACTCAATTATTCTCGGGCCAGGAGGAAGCGCCGCACTGGCATATCATGACGGCGAAAGAGTTCGCTTCGCCGTCGCCATTGAAGGTGAAAACAATATTCGAGCCGGAGTCCGCTATCGTCTTAATGAACAGCATCAGTTTGTTGAGTGCTGA", - "dna_sequence_length": 813, - "functions": [ - "FNR, Nar, NarP-regulated protein", - "putative subunit of YdhYVWXUT oxidoreductase complex" - ], - "id": "CDS_1658", - "location": [ 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"dna_sequence": "ATGAACCCGTCGCAACATGCTGAACAGTTTCAGAGCCAGTTAGCGAACTATGTGCCACAGTTCACTCCCGAATTTTGGCCGGTGTGGTTGATCATTGCCGGAGTATTGCTGGTTGGGATGTGGTTGGTGCTGGGGCTGCATGCCTTGCTTCGTGCTCGTGGCGTGAAGAAATCAGCCACCGATCATGGTGAGAAGATTTATCTTTACAGCAAAGCGGTCAGATTATGGCACTGGTCGAATGCGTTACTCTTTGTATTGTTGCTGGCCAGTGGGCTGATAAATCACTTTGCGATGGTGGGCGCAACTGCGGTTAAAAGTCTGGTTGCGGTGCATGAAGTTTGCGGATTTTTGTTACTGGCATGCTGGCTCGGCTTTGTGCTGATCAATGCCGTTGGGGATAATGGTCACCACTATCGCATTCGTCGTCAGGGGTGGCTGGAACGAGCGGCAAAACAAACGCGATTTTATTTGTTTGGCATTATGCAGGGGGAAGAACATCCTTTCCCGGCAACAACCCAGTCTAAATTTAATCCCTTACAGCAGGTCGCCTATGTTGGTGTCATGTATGGATTGCTGCCGTTGTTACTATTGACGGGGCTGCTGTGTCTCTATCCGCAAGCCGTGGGAGATGTGTTTCCTGGCGTAAGATACTGGTTATTGCAGACACATTTTGCTCTGGCATTTATAAGCCTCTTTTTTATCTTCGGTCATCTTTATCTTTGCACCACGGGGCGTACGCCACACGAAACCTTTAAAAGCATGGTCGATGGCTATCACCGGCACTAA", - "dna_sequence_length": 786, - "functions": [ - "putative cytochrome b subunit of YdhYVWXUT oxidoreductase complex" - ], - "id": "CDS_1659", - "location": [ - [ - "NC_000913", - 1750348, - "-", - 786 - ] - ], - "md5": "5b1da29d23eebd1177af5ebc7c9d84c8", - "parent_gene": "", - "protein_md5": "df06c3d4409cd667313baf3465922b55", - "protein_translation": "MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKIYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQTHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH", - "protein_translation_length": 261, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1667" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77375" - ], - [ - "gene_synonym", - "ASAP:ABE-0005583" - ], - [ - "gene_synonym", - "JW5271" - ], - [ - "gene_synonym", - "EcoGene:EG13958" - ], - [ - "gene_synonym", - "NP_416186.4" - ], - [ - "gene_synonym", - "GI:226524717" - ], - [ - "gene_synonym", - "ydhX" - ], - [ - "gene_synonym", - "GeneID:947308" - ], - [ - "gene_synonym", - "b1671" - ] - ], - "dna_sequence": "ATGTCCTTCACTCGACGCAAATTTGTTCTGGGGATGGGAACAGTAATCTTTTTTACTGGTTCTGCGTCTTCTCTGTTAGCGAACACGAGGCAAGAAAAGGAAGTTCGGTATGCCATGATTCATGACGAGTCACGGTGCAATGGCTGTAATATTTGCGCCCGCGCATGCCGTAAAACTAACCACGTCCCCGCTCAGGGAAGCCGTTTATCGATAGCACACATTCCAGTCACCGATAACGACAACGAAACGCAGTATCACTTTTTTCGCCAGTCATGTCAGCACTGCGAAGATGCTCCGTGCATCGACGTTTGCCCGACGGGGGCGTCGTGGCGTGATGAGCAGGGGATCGTGCGGGTAGAAAAATCGCAGTGCATCGGCTGCAGTTATTGCATTGGCGCTTGTCCGTACCAGGTTCGCTACCTTAACCCTGTCACTAAAGTGGCAGATAAATGTGATTTCTGCGCTGAGTCCCGACTGGCAAAAGGCTTTCCGCCCATTTGCGTCAGCGCCTGCCCGGAACACGCATTGATCTTTGGTCGCGAAGATAGCCCAGAAATTCAGGCGTGGTTGCAGCAAAATAAATACTATCAATATCAGCTACCTGGTGCCGGGAAACCGCATCTGTATCGCCGGTTCGGTCAACATTTGATTAAAAAGGAAAATGTATGA", - "dna_sequence_length": 669, - "functions": [ - "putative 4Fe-4S ferridoxin-type protein", - "FNR, Nar, NarP-regulated protein", - "putative subunit of YdhYVWXUT oxidoreductase complex" - ], - "id": "CDS_1660", - "location": [ - [ - "NC_000913", - 1751013, - "-", - 669 - ] - ], - "md5": "a6138dcfc4029d9aafa1e5291ee2dca5", - "parent_gene": "", - "protein_md5": "c3ec4eda5abc6d90ba89a312af7becf9", - "protein_translation": "MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQQNKYYQYQLPGAGKPHLYRRFGQHLIKKENV", - "protein_translation_length": 222, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005585" - ], - [ - "gene_synonym", - "EcoGene:EG13957" - ], - [ - "gene_synonym", - "NP_416187.1" - ], - [ - "gene_synonym", - "ECK1668" - ], - [ - "gene_synonym", - "GeneID:947180" - ], - [ - "gene_synonym", - "JW1662" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77564" - ], - [ - "gene_synonym", - "ydhW" - ], - [ - "gene_synonym", - "b1672" - ], - [ - "gene_synonym", - "GI:16129628" - ] - ], - "dna_sequence": "ATGGGTAAGATGAACCATCAGGATGAATTGCCGTTAGCGAAAGTCAGCGAAGTTGACGAGGCGAAGCGGCAATGGTTGCAGGGGATGCGTCACCCCGTTGATACGGTAACCGAACCAGAACCTGCTGAAATCCTGGCTGAGTTCATTCGCCAGCATTCTGCGGCTGGGCAGCTGGTGGCGCGCGCCGTGTTTCTCTCGCCACCCTATTTGGTTGCAGAAGAGGAACTGTCAGTTTTGCTGGAAAGCATTAAGCAGAACGGAGACTACGCGGATATCGCTTGTTTGACGGGAAGCAAGGATGATTACTATTACTCAACGCAGGCCATGAGTGAAAACTACGCGGCGATGTCTTTGCAAGTTGTGGAGCAGGACATTTGTCGCGCCATTGCACACGCCGTTCGTTTTGAGTGCCAGACGTATCCTCGTCCTTACAAAGTCGCCATGCTGATGCAAGCGCCATATTACTTCCAGGAAGCGCAGATTGAAGCCGCGATCGCCGCGATGGATGTTGCACCTGAATATGCCGATATACGGCAGGTGGAGTCATCGACGGCGGTGTTGTACTTGTTTAGCGAGCGATTTATGACCTATGGCAAGGCTTATGGCTTATGCGAATGGTTCGAGGTAGAGCAGTTTCAGAACCCCTGA", - "dna_sequence_length": 648, - "functions": [ - "FNR, Nar, NarP-regulated protein", - "putative subunit of YdhYVWXUT oxidoreductase complex" - ], - "id": "CDS_1661", - "location": [ - [ - "NC_000913", - 1751724, - "-", - 648 - ] - ], - "md5": "29bcd51d227a0cfc063382f40105b9b4", - "parent_gene": "", - "protein_md5": "b63f693f0ca98253b7ebec9a077a33da", - "protein_translation": "MGKMNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYLVAEEELSVLLESIKQNGDYADIACLTGSKDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP", - "protein_translation_length": 215, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76192" - ], - [ - "gene_synonym", - "ASAP:ABE-0005587" - ], - [ - "gene_synonym", - "EcoGene:EG13956" - ], - [ - "gene_synonym", - "GeneID:948756" - ], - [ - "gene_synonym", - "JW5272" - ], - [ - "gene_synonym", - "ECK1669" - ], - [ - "gene_synonym", - "NP_416188.1" - ], - [ - "gene_synonym", - "b1673" - ], - [ - "gene_synonym", - "ydhV" - ], - [ - "gene_synonym", - "GI:16129629" - ] - ], - "dna_sequence": "ATGGCTAACGGTTGGACAGGTAATATATTAAGAGTCAATCTCACGACAGGAAATATTACCCTCGAAGATTCCAGTAAGTTTAAAAGTTTTGTCGGTGGCATGGGCTTCGGCTACAAAATTATGTATGACGAAGTACCGCCAGGCACGAAACCTTTCGATGAAGCGAATAAATTAGTCTTTGCTACCGGCCCATTAACTGGATCTGGTGCCCCCTGTAGTTCTCGCGTAAATATCACCTCACTTTCTACTTTTACCAAAGGAAATTTAGTCGTCGATGCCCATATGGGTGGCTTTTTTGCAGCGCAAATGAAATTCGCTGGATACGACGTCATTATTATCGAAGGGAAGGCGAAATCACCGGTATGGCTGAAGATTAAAGATGACAAAGTTAGCCTGGAAAAAGCCGATTTCTTATGGGGAAAAGGGACGCGCGCAACGACGGAAGAAATTTGTCGATTGACCAGTCCGGAAACCTGTGTGGCGGCTATTGGTCAGGCTGGGGAAAACCTTGTTCCTCTCTCTGGCATGTTGAATAGCCGTAACCACAGCGGCGGTGCGGGAACTGGCGCAATAATGGGTTCGAAAAACCTGAAAGCGATTGCGGTTGAAGGGACGAAAGGGGTCAACATTGCCGATCGTCAGGAGATGAAGCGTCTCAATGATTACATGATGACTGAACTTATTGGTGCGAATAACAACCATGTCGTGCCAAGTACGCCACAATCGTGGGCAGAGTATTCAGATCCCAAGTCACGCTGGACAGCACGTAAAGGGCTGTTTTGGGGCGCGGCTGAAGGTGGTCCGATTGAAACGGGTGAAATTCCGCCAGGCAATCAGAATACGGTCGGCTTTCGTACCTATAAATCCGTTTTTGACTTAGGACCGGCGGCAGAGAAATACACAGTAAAAATGAGCGGCTGCCACTCTTGCCCGATCCGTTGTATGACCCAAATGAATATTCCTCGGGTGAAAGAGTTTGGCGTGCCCAGCACAGGTGGTAACACTTGTGTAGCAAACTTTGTCCATACCACCATCTTCCCGAACGGGCCGAAAGATTTTGAAGATAAAGACGATGGTCGTGTGATTGGTAACCTGGTGGGTCTGAATTTGTTCGATGACTACGGCCTATGGTGTAACTACGGGCAGTTGCATCGCGACTTTACTTATTGTTACAGCAAAGGTGTGTTCAAGCGTGTTCTGCCAGCTGAAGAGTATGCAGAAATTCGCTGGGATCAACTGGAAGCGGGTGACGTTAACTTCATTAAAGATTTTTACTACCGTCTGGCGCATCGTGTGGGTGAGCTGAGTCACCTGGCTGATGGTTCATATGCCATCGCAGAACGCTGGAATTTGGGTGAAGAGTACTGGGGCTACGCGAAAAATAAACTCTGGTCGCCGTTTGGCTATCCGGTTCACCATGCCAATGAAGCGTCAGCGCAGGTCGGTTCCATTGTTAACTGTATGTTCAACCGTGACTGCATGACGCATACCCATATCAACTTTATTGGTTCCGGCTTGCCATTGAAACTGCAACGTGAAGTGGCGAAAGAACTTTTTGGTTCTGAAGATGCTTACGATGAAACCAAAAACTACACGCCAATCAATGACGCAAAAATTAAATATGCAAAGTGGTCGCTGTTGCGGGTCTGTTTGCATAACGCCGTCACCCTGTGCAACTGGGTCTGGCCAATGACCGTTTCGCCGCTGAAAAGCCGTAATTACCGGGGCGATCTGGCGCTTGAAGCCAAATTCTTCAAAGCGATCACCGGCGAAGAGATGACTCAGGAAAAATTAGATTTAGCTGCAGAGCGTATTTTTACGTTGCATCGTGCCTACACGGTAAAACTGATGCAAACCAAAGATATGCGTAATGAACACGATCTTATCTGTTCCTGGGTATTCGACAAGGATCCGCAGATCCCGGTCTTTACTGAAGGTACTGACAAAATGGATCGTGACGATATGCATGCTTCGCTCACGATGTTCTACAAAGAAATGGGCTGGGACCCACAGCTTGGTTGTCCAACCCGCGAAACATTGCAGCGTCTGGGGCTGGAAGATATTGCCGCCGATCTGGCAGCACACAATCTACTGCCTGCGTAA", 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"MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPA", - "protein_translation_length": 700, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1670" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAL6" - ], - [ - "gene_synonym", - "EcoGene:EG13959" - ], - [ - "gene_synonym", - "GeneID:948749" - ], - [ - "gene_synonym", - "ASAP:ABE-0005589" - ], - [ - "gene_synonym", - "GI:16129630" - ], - [ - "gene_synonym", - "ydhY" - ], - [ - "gene_synonym", - "JW1664" - ], - [ - "gene_synonym", - "b1674" - ], - [ - "gene_synonym", - "NP_416189.1" - ] - ], - "dna_sequence": "ATGAACCCGGTTGATCGTCCACTATTAGATATTGGCTTAACGCGATTAGAATTCTTGCGTATATCAGGAAAAGGCCTTGCTGGTCTAACAATTGCCCCTGCGTTACTGTCACTTTTGGGTTGCAAACAGGAAGATATTGATAGCGGCACAGTAGGGTTGATAAATACCCCCAAAGGGGTGCTGGTGACCCAGCGAGCGCGATGCACGGGTTGCCACCGCTGTGAAATCTCTTGTACCAACTTCAACGATGGCTCAGTAGGGACATTCTTCTCCCGTATCAAAATCCATCGCAATTATTTCTTTGGCGACAACGGGGTTGGCTCTGGCGGCGGCCTGTATGGCGATCTCAACTATACCGCGGACACCTGCCGTCAATGCAAAGAGCCGCAATGCATGAACGTCTGCCCGATTGGTGCGATTACCTGGCAGCAGAAAGAAGGCTGTATTACCGTCGATCATAAACGCTGTATTGGCTGTAGCGCCTGTACTACGGCATGCCCGTGGATGATGGCCACCGTAAATACCGAAAGTAAAAAATCCTCGAAATGTGTGTTATGCGGTGAATGCGCAAACGCCTGCCCAACAGGGGCGTTAAAAATTATCGAGTGGAAAGATATTACTGTGTGA", - "dna_sequence_length": 627, - "functions": [ - "putative 4Fe-4S ferridoxin-type protein", - "FNR, Nar, NarP-regulated 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"gene_synonym", - "EcoGene:EG13960" - ] - ], - "dna_sequence": "ATGGGAAATCGGACAAAAGAGGATGAACTGTACCGAGAAATGTGCAGAGTTGTCGGTAAAGTTGTGCTGGAAATGCGCGATCTGGGGCAGGAACCAAAGCATATTGTTATCGCAGGCGTATTACGTACAGCATTAGCCAATAAACGCATTCAGCGCAGTGAGCTGGAAAAGCAGGCGATGGAAACCGTCATTAACGCACTGGTAAAATGA", - "dna_sequence_length": 210, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1664", - "location": [ - [ - "NC_000913", - 1755141, - "-", - 210 - ] - ], - "md5": "7babd1490ff47f37e7afe376dca3a803", - "parent_gene": "", - "protein_md5": "cec23b87dbcb2822c751fda67bdbd9a6", - "protein_translation": "MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK", - "protein_translation_length": 69, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10804" - ], - [ - "gene_synonym", - "ECK1672" - ], - [ - "gene_synonym", - "NP_416191.1" - ], - [ - "gene_synonym", - "pykF" - ], - [ - "gene_synonym", - "GI:16129632" - ], - [ - "gene_synonym", - "ASAP:ABE-0005600" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD61" - ], - [ - "gene_synonym", - "b1676" - ], - [ - "gene_synonym", - "JW1666" - ], - [ - "gene_synonym", - "GeneID:946179" - ] - ], - "dna_sequence": "ATGAAAAAGACCAAAATTGTTTGCACCATCGGACCGAAAACCGAATCTGAAGAGATGTTAGCTAAAATGCTGGACGCTGGCATGAACGTTATGCGTCTGAACTTCTCTCATGGTGACTATGCAGAACACGGTCAGCGCATTCAGAATCTGCGCAACGTGATGAGCAAAACTGGTAAAACCGCCGCTATCCTGCTTGATACCAAAGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGTAACGACGTTTCTCTGAAAGCTGGTCAGACCTTTACTTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAGTTATCTGTAAAGTGCTGAACAACGGTGACCTGGGCGAAAACAAAGGTGTGAACCTGCCTGGCGTTTCCATTGCTCTGCCAGCACTGGCTGAAAAAGACAAACAGGACCTGATCTTTGGTTGCGAACAAGGCGTAGACTTTGTTGCTGCTTCCTTTATTCGTAAGCGTTCTGACGTTATCGAAATCCGTGAGCACCTGAAAGCGCACGGCGGCGAAAACATCCACATCATCTCCAAAATCGAAAACCAGGAAGGCCTCAACAACTTCGACGAAATCCTCGAAGCCTCTGACGGCATCATGGTTGCGCGTGGCGACCTGGGTGTAGAAATCCCGGTAGAAGAAGTTATCTTCGCCCAGAAGATGATGATCGAAAAATGTATCCGTGCACGTAAAGTCGTTATCACTGCGACCCAGATGCTGGATTCCATGATCAAAAACCCACGCCCGACTCGCGCAGAAGCCGGTGACGTTGCAAACGCCATCCTCGACGGTACTGACGCAGTGATGCTGTCTGGTGAATCCGCAAAAGGTAAATACCCGCTGGAAGCGGTTTCTATCATGGCGACCATCTGCGAACGTACCGACCGCGTGATGAACAGCCGTCTCGAGTTCAACAATGACAACCGTAAACTGCGCATTACCGAAGCGGTATGCCGTGGTGCCGTTGAAACTGCTGAAAAACTGGATGCTCCGCTGATCGTGGTTGCTACTCAGGGCGGTAAATCTGCTCGCGCAGTACGTAAATACTTCCCGGATGCCACCATCCTGGCACTGACCACCAACGAAAAAACGGCTCATCAGTTGGTACTGAGCAAAGGCGTTGTGCCGCAGCTTGTTAAAGAGATCACTTCTACTGATGATTTCTACCGTCTGGGTAAAGAACTGGCTCTGCAGAGCGGTCTGGCACACAAAGGTGACGTTGTAGTTATGGTTTCTGGTGCACTGGTACCGAGCGGCACTACTAACACCGCATCTGTTCACGTCCTGTAA", 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"gene_synonym", - "ECK1673" - ], - [ - "gene_synonym", - "lpp" - ], - [ - "gene_synonym", - "GI:16129633" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69776" - ], - [ - "gene_synonym", - "EcoGene:EG10544" - ], - [ - "gene_synonym", - "mlpA" - ], - [ - "gene_synonym", - "GeneID:946175" - ], - [ - "gene_synonym", - "b1677" - ], - [ - "gene_synonym", - "JW1667" - ] - ], - "dna_sequence": "ATGAAAGCTACTAAACTGGTACTGGGCGCGGTAATCCTGGGTTCTACTCTGCTGGCAGGTTGCTCCAGCAACGCTAAAATCGATCAGCTGTCTTCTGACGTTCAGACTCTGAACGCTAAAGTTGACCAGCTGAGCAACGACGTGAACGCAATGCGTTCCGACGTTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAA", - "dna_sequence_length": 237, - "functions": [ - "murein lipoprotein" - ], - "id": "CDS_1666", - "location": [ - [ - "NC_000913", - 1757421, - "+", - 237 - ] - ], - "md5": "713dd4ca8fd6514578592d463a9df5f1", - "parent_gene": "", - "protein_md5": "45b221a7f65fe18aefeef1bec5704c51", - "protein_translation": "MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK", - "protein_translation_length": 78, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1674" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76193" - ], - [ - "gene_synonym", - "EcoGene:EG14015" - ], - [ - "gene_synonym", - "NP_416193.1" - ], - [ - "gene_synonym", - "GeneID:946174" - ], - [ - "gene_synonym", - "ASAP:ABE-0005605" - ], - [ - "gene_synonym", - "JW1668" - ], - [ - "gene_synonym", - "GI:16129634" - ], - [ - "gene_synonym", - "ynhG" - ], - [ - "gene_synonym", - "b1678" - ], - [ - "gene_synonym", - "ldtE" - ] - ], - "dna_sequence": "ATGAAACGCGCGTCTTTGCTTACACTCACGCTTATCGGCGCTTTTAGCGCCATCCAGGCTGCCTGGGCGGTTGATTATCCGCTACCACCAACCGGAAGCCGACTGGTTGGGCAAAATCAAACGTATACGGTGCAAGAAGGGGATAAAAACCTTCAGGCTATTGCCCGACGTTTTGATACTGCGGCAATGTTGATCCTTGAAGCCAATAACACTATCGCCCCGGTGCCAAAACCTGGTACGACGATAACTATTCCTTCACAACTGTTATTACCTGATGCACCGCGTCAGGGGATTATCGTTAACCTTGCAGAGCTGCGCCTTTATTATTATCCGCCGGGAGAAAATATTGTGCAGGTTTATCCAATAGGTATTGGATTGCAGGGGCTGGAAACGCCGGTGATGGAAACGCGTGTTGGGCAGAAAATCCCTAACCCAACCTGGACGCCTACGGCAGGCATTCGTCAGCGTTCGCTGGAGCGTGGCATTAAATTACCGCCAGTCGTTCCTGCCGGACCAAATAACCCGCTAGGACGTTACGCACTGCGCCTCGCGCATGGTAATGGCGAATACCTCATTCATGGTACCAGTGCGCCGGACAGCGTCGGTTTGCGCGTCAGTTCAGGGTGTATTCGCATGAATGCACCGGATATTAAAGCCTTGTTCTCCAGCGTGCGGACGGGAACGCCGGTGAAAGTGATCAACGAACCGGTGAAATATTCCGTGGAGCCTAACGGGATGCGTTATGTTGAAGTACATCGACCACTATCGGCAGAAGAACAGCAGAACGTTCAGACAATGCCATACACACTGCCAGCAGGCTTTACGCAATTTAAAGACAATAAGGCTGTAGATCAGAAGTTAGTCGATAAAGCGTTGTATCGTCGGGCAGGGTATCCGGTTTCGGTGAGCAGTGGAGCAACTCCCGCAGCCAGCAATGCGCCTTCAGTAGAGTCAGCGCAGAATGGTGAACCAGAGCAAGGGAATATGTTACGCGTGACGCAGTAG", 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"gene_synonym", - "GI:16129635" - ], - [ - "gene_synonym", - "JW1669" - ], - [ - "gene_synonym", - "b1679" - ], - [ - "gene_synonym", - "EcoGene:EG13961" - ], - [ - "gene_synonym", - "ASAP:ABE-0005608" - ] - ], - "dna_sequence": "ATGGCTTTATTGCCGGATAAAGAAAAGTTGCTGCGTAATTTTTTACGCTGCGCCAACTGGGAAGAGAAATATCTCTACATTATTGAGCTGGGCCAGCGTCTGCCAGAATTACGCGACGAAGACAGAAGTCCACAAAATAGCATTCAGGGCTGTCAGAGTCAGGTGTGGATTGTCATGCGCCAGAATGCCCAGGGAATTATTGAATTACAGGGCGACAGCGATGCGGCGATTGTGAAAGGGCTTATTGCGGTCGTCTTTATTCTCTACGATCAGATGACGCCGCAGGATATTGTCAATTTCGATGTGCGTCCGTGGTTTGAAAAAATGGCGCTCACCCAACATCTCACCCCATCTCGTTCACAAGGTCTGGAAGCGATGATTCGCGCAATTCGCGCCAAAGCCGCTGCACTTAGCTAA", - "dna_sequence_length": 417, - "functions": [ - "sulfur acceptor protein" - ], - "id": "CDS_1668", - "location": [ - [ - "NC_000913", - 1759290, - "-", - 417 - ] - ], - "md5": "7fee5706c4271848f03b77bf968c3074", - "parent_gene": "", - "protein_md5": "dc99204c6e5810e9f78af9d17059f883", - "protein_translation": "MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRDEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDVRPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAALS", - "protein_translation_length": 138, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1676" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77444" - ], - [ - "gene_synonym", - "GeneID:946185" - ], - [ - "gene_synonym", - "EcoGene:EG13962" - ], - [ - "gene_synonym", - "sufS" - ], - [ - "gene_synonym", - "ASAP:ABE-0005610" - ], - [ - "gene_synonym", - "ynhB" - ], - [ - "gene_synonym", - "NP_416195.1" - ], - [ - "gene_synonym", - "b1680" - ], - [ - "gene_synonym", - "GI:16129636" - ], - [ - "gene_synonym", - "csdB" - ], - [ - "gene_synonym", - "JW1670" - ] - ], - "dna_sequence": "ATGATTTTTTCCGTCGACAAAGTGCGGGCCGACTTTCCGGTGCTTTCGCGTGAGGTAAACGGTTTGCCGCTGGCTTATCTCGACAGCGCCGCCAGTGCGCAGAAACCGAGCCAGGTGATTGACGCCGAGGCCGAGTTTTATCGTCATGGCTACGCGGCGGTGCATCGTGGTATTCATACCTTAAGCGCCCAGGCGACCGAGAAAATGGAGAACGTGCGCAAGCGGGCATCGCTGTTTATTAATGCCCGTTCGGCGGAAGAGCTGGTGTTCGTCCGCGGCACGACGGAAGGGATCAATCTGGTCGCCAATAGCTGGGGCAACAGCAACGTGCGGGCGGGCGATAACATCATCATCAGTCAGATGGAGCACCACGCTAACATTGTTCCCTGGCAGATGCTTTGCGCACGCGTTGGCGCAGAGCTGCGTGTGATCCCGCTCAATCCCGATGGTACGTTGCAACTGGAGACGCTGCCTACGCTGTTTGATGAGAAAACTCGCCTGCTGGCAATTACTCATGTCTCCAACGTGCTTGGCACAGAAAATCCACTGGCGGAAATGATCACGCTTGCGCACCAGCATGGCGCAAAAGTGCTGGTGGATGGCGCTCAGGCGGTGATGCATCATCCGGTGGATGTTCAGGCGCTGGATTGCGACTTTTACGTGTTCTCCGGGCATAAACTGTATGGCCCCACCGGAATTGGCATTCTTTATGTGAAAGAAGCCTTGTTGCAGGAGATGCCGCCGTGGGAAGGGGGCGGTTCTATGATCGCCACCGTCAGCCTGAGTGAAGGCACTACCTGGACCAAAGCACCATGGCGGTTTGAAGCCGGTACACCCAATACCGGGGGCATCATTGGTCTTGGCGCGGCGCTGGAGTATGTTTCGGCGCTGGGGCTTAATAACATAGCCGAGTATGAACAGAATCTGATGCATTATGCGCTATCACAGCTGGAATCTGTACCGGATCTCACTCTCTATGGCCCACAAAACAGGCTTGGCGTTATTGCTTTTAATCTCGGTAAACACCACGCCTATGATGTTGGCAGTTTTCTCGATAATTACGGCATTGCTGTGCGTACCGGACATCACTGCGCAATGCCATTGATGGCCTATTACAACGTCCCTGCGATGTGTCGGGCGTCGCTGGCCATGTATAACACCCATGAAGAAGTGGATCGTCTGGTGACCGGCCTGCAACGTATTCACCGTTTGCTGGGATAA", 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"gene_synonym", - "GeneID:944878" - ], - [ - "gene_synonym", - "ynhC" - ], - [ - "gene_synonym", - "ASAP:ABE-0005617" - ], - [ - "gene_synonym", - "GI:16129637" - ], - [ - "gene_synonym", - "b1681" - ], - [ - "gene_synonym", - "EcoGene:EG13963" - ], - [ - "gene_synonym", - "JW1671" - ], - [ - "gene_synonym", - "NP_416196.1" - ] - ], - "dna_sequence": "ATGGCTGGCTTACCGAACAGCAGTAACGCGCTGCAACAGTGGCATCACTTGTTTGAAGCTGAAGGGACAAAACGCTCCCCGCAAGCACAGCAGCATTTACAACAATTGCTGCGTACCGGACTGCCGACACGTAAACATGAAAACTGGAAATATACGCCGCTGGAAGGGCTGATCAATAGCCAGTTTGTCAGCATTGCGGGAGAGATATCCCCACAGCAGCGTGATGCCTTAGCGTTAACGTTAGACTCCGTGCGGCTGGTGTTTGTCGATGGGCGTTACGTGCCCGCACTGAGCGATGCAACTGAAGGCAGCGGATATGAAGTGAGCATTAACGACGACCGTCAGGGTTTACCCGACGCTATTCAGGCGGAAGTGTTTCTGCATTTGACGGAAAGCCTGGCACAAAGCGTGACGCATATCGCCGTGAAGCGCGGTCAACGGCCGGCAAAGCCATTGCTGTTAATGCATATCACCCAGGGCGTGGCAGGTGAAGAGGTGAACACTGCCCATTACCGACATCATCTGGATCTGGCGGAAGGTGCCGAAGCAACGGTGATCGAACATTTTGTCAGCCTGAATGATGCTCGTCATTTTACCGGGGCACGGTTCACTATCAACGTCGCAGCGAATGCCCACTTGCAGCATATCAAGCTGGCGTTTGAAAACCCGCTCAGTCACCACTTTGCTCATAACGATTTGTTGCTGGCTGAGGATGCCACCGCATTTAGCCACAGTTTCCTGCTGGGTGGCGCAGTGTTACGACACAACACCAGTACGCAACTCAATGGCGAAAACAGCACGCTGCGGATCAATAGCCTGGCGATGCCGGTGAAAAACGAGGTGTGTGATACCCGTACCTGGCTGGAACACAATAAAGGTTTTTGTAACAGCCGACAGTTGCACAAAACTATCGTCAGCGACAAAGGCCGCGCGGTATTTAACGGTTTGATCAACGTCGCGCAGCACGCCATCAAAACGGATGGTCAGATGACCAACAACAATCTGCTGATGGGCAAACTGGCGGAAGTGGATACGAAACCGCAGCTGGAAATCTATGCAGATGATGTGAAATGCAGCCACGGCGCGACGGTGGGGCGTATTGATGATGAACAGATATTCTATCTGCGCTCGCGCGGGATCAATCAGCAGGATGCCCAGCAGATGATCATTTACGCCTTCGCTGCCGAACTGACGGAAGCACTGCGTGATGAGGGGCTTAAACAGCAGGTGCTGGCCCGAATCGGTCAACGGCTGCCAGGAGGTGCAAGATGA", - "dna_sequence_length": 1272, - "functions": [ - "component of SufBCD Fe-S cluster assembly scaffold" - ], - "id": "CDS_1670", - "location": [ - [ - "NC_000913", - 1761791, - "-", - 1272 - ] - ], - "md5": "a9dfe01ed41ec2eb829b7fc50c18370a", - "parent_gene": "", - "protein_md5": "d96aa1288e0ede85da4731e1dd49e54f", - "protein_translation": "MAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTRKHENWKYTPLEGLINSQFVSIAGEISPQQRDALALTLDSVRLVFVDGRYVPALSDATEGSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMHITQGVAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKLAFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMPVKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNNLLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQIFYLRSRGINQQDAQQMIIYAFAAELTEALRDEGLKQQVLARIGQRLPGGAR", - "protein_translation_length": 423, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "sufC" - ], - [ - "gene_synonym", - "NP_416197.1" - ], - [ - "gene_synonym", - "ECK1678" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77499" - ], - [ - "gene_synonym", - "b1682" - ], - [ - "gene_synonym", - "ynhD" - ], - [ - "gene_synonym", - "GI:16129638" - ], - [ - "gene_synonym", - "JW1672" - ], - [ - "gene_synonym", - "ASAP:ABE-0005619" - ], - [ - "gene_synonym", - "EcoGene:EG13964" - ], - [ - "gene_synonym", - "GeneID:946128" - ] - ], - "dna_sequence": "ATGTTAAGTATTAAAGATTTACACGTCAGCGTGGAAGATAAAGCTATCCTGCGCGGATTAAGCCTCGACGTTCATCCCGGCGAAGTTCACGCCATTATGGGGCCAAACGGTTCGGGCAAAAGTACCTTATCGGCAACGCTTGCCGGGCGAGAAGATTATGAAGTGACGGGCGGCACGGTTGAGTTCAAAGGCAAAGATTTGCTTGCGCTGTCGCCGGAAGATCGCGCGGGCGAAGGCATCTTTATGGCCTTCCAGTATCCGGTGGAGATTCCAGGTGTCAGTAACCAGTTTTTCCTGCAAACGGCACTTAATGCGGTGCGCAGCTATCGCGGCCAGGAAACGCTCGACCGCTTTGATTTTCAGGATTTGATGGAAGAGAAAATCGCTCTCCTGAAGATGCCGGAAGATTTATTAACCCGTTCGGTAAACGTTGGTTTTTCCGGCGGCGAGAAAAAGCGCAACGATATTTTGCAAATGGCGGTGCTGGAACCGGAGTTATGCATTCTTGATGAGTCGGACTCCGGGCTGGATATTGACGCATTAAAAGTGGTCGCCGATGGCGTGAACTCGCTGCGTGATGGCAAGCGCTCATTCATCATTGTTACGCACTACCAACGCATTCTCGACTACATCAAGCCTGATTACGTTCATGTGCTATATCAGGGACGAATTGTGAAATCCGGCGATTTCACGTTGGTCAAACAACTGGAGGAGCAGGGTTATGGCTGGCTTACCGAACAGCAGTAA", - "dna_sequence_length": 747, - "functions": [ - "SufBCD Fe-S cluster assembly scaffold protein, ATP-binding protein" - ], - "id": "CDS_1671", - "location": [ - [ - "NC_000913", - 1762512, - "-", - 747 - ] - ], - "md5": "9f24b923b71b910479fbfc8c80a68bc8", - "parent_gene": "", - "protein_md5": "660b93b6747e9755fb79718e03d4ac64", - "protein_translation": "MLSIKDLHVSVEDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQGYGWLTEQQ", - "protein_translation_length": 248, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "sufB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77522" - ], - [ - "gene_synonym", - "JW5273" - ], - [ - "gene_synonym", - "ECK1679" - ], - [ - "gene_synonym", - "ASAP:ABE-0005621" - ], - [ - "gene_synonym", - "NP_416198.2" - ], - [ - "gene_synonym", - "GeneID:945753" - ], - [ - "gene_synonym", - "GI:90111315" - ], - [ - "gene_synonym", - "ynhE" - ], - [ - "gene_synonym", - "b1683" - ], - [ - "gene_synonym", - "EcoGene:EG13965" - ] - ], - "dna_sequence": "ATGTCTCGTAATACTGAAGCAACTGACGATGTCAAAACCTGGACCGGCGGCCCGCTGAATTATAAAGAAGGATTCTTCACCCAGTTAGCCACCGATGAGCTGGCAAAGGGGATAAACGAAGAGGTGGTGCGCGCAATTTCGGCGAAGCGTAATGAGCCGGAGTGGATGCTGGAGTTTCGTCTAAACGCCTATCGCGCATGGCTGGAGATGGAAGAACCGCACTGGTTGAAAGCGCACTACGACAAGCTGAATTATCAGGATTACAGCTACTACTCAGCACCATCGTGCGGTAATTGTGACGACACTTGCGCGTCTGAACCTGGCGCGGTGCAGCAAACTGGCGCGAACGCCTTTTTAAGTAAAGAGGTGGAGGCGGCGTTTGAGCAGTTGGGCGTTCCCGTGCGGGAAGGCAAAGAGGTGGCGGTGGATGCCATTTTCGACTCAGTTTCGGTTGCCACTACTTATCGCGAAAAACTGGCGGAGCAGGGAATTATTTTCTGTTCCTTTGGTGAGGCGATCCACGATCACCCGGAACTGGTGCGTAAATATCTCGGCACCGTGGTGCCGGGGAATGACAACTTCTTTGCCGCGCTTAATGCGGCGGTAGCCTCTGATGGTACGTTTATTTATGTGCCTAAAGGCGTGCGCTGCCCGATGGAACTTTCCACCTATTTTCGCATTAACGCAGAAAAAACCGGGCAGTTTGAGCGCACCATTCTGGTGGCCGACGAAGACAGCTACGTCAGCTACATTGAAGGCTGTTCCGCTCCGGTGCGTGACAGCTATCAGTTACACGCGGCAGTGGTGGAAGTCATCATCCATAAAAACGCCGAGGTGAAATATTCCACGGTACAAAACTGGTTTCCTGGCGATAACAACACCGGCGGTATTCTCAACTTCGTCACCAAGCGTGCTTTGTGCGAAGGCGAAAACAGCAAAATGTCATGGACGCAATCAGAAACCGGGTCAGCGATTACGTGGAAATATCCCAGCTGCATTTTGCGCGGCGATAACTCCATTGGTGAGTTTTACTCAGTGGCGCTGACCAGCGGTCATCAGCAAGCGGATACCGGCACCAAGATGATCCACATCGGTAAAAACACCAAATCGACCATTATCTCGAAAGGGATCTCTGCCGGACATAGTCAGAACAGTTATCGCGGCTTAGTGAAAATCATGCCGACGGCAACCAATGCGCGCAATTTCACTCAGTGCGACTCAATGCTGATTGGCGCTAATTGTGGGGCGCATACCTTCCCGTATGTTGAGTGTCGTAACAATAGTGCGCAACTGGAACACGAGGCAACGACATCACGTATTGGTGAAGATCAACTGTTTTACTGCCTGCAACGCGGGATCAGCGAAGAAGACGCCATCTCGATGATTGTTAACGGTTTCTGCAAAGACGTGTTCTCGGAGCTGCCGTTGGAATTTGCCGTTGAAGCACAAAAACTCCTCGCCATCAGTCTTGAACACAGCGTCGGATAA", - "dna_sequence_length": 1488, - "functions": [ - "component of SufBCD Fe-S cluster assembly scaffold" - ], - "id": "CDS_1672", - "location": [ - [ - "NC_000913", - 1764009, - "-", - 1488 - ] - ], - "md5": "7cced5997298641ad1c4c785ffbc177d", - "parent_gene": "", - "protein_md5": "0bc077e6469b6ffa4f275bbec990e95e", - "protein_translation": "MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVRAISAKRNEPEWMLEFRLNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDTCASEPGAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLAEQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCPMELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKNAEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQRGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG", - "protein_translation_length": 495, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129640" - ], - [ - "gene_synonym", - "sufA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77667" - ], - [ - "gene_synonym", - "NP_416199.1" - ], - [ - "gene_synonym", - "ydiC" - ], - [ - "gene_synonym", - "ECK1680" - ], - [ - "gene_synonym", - "GeneID:949014" - ], - [ - "gene_synonym", - "b1684" - ], - [ - "gene_synonym", - "EcoGene:EG11378" - ], - [ - "gene_synonym", - "ASAP:ABE-0005624" - ], - [ - "gene_synonym", - "JW1674" - ] - ], - "dna_sequence": "ATGGACATGCATTCAGGAACCTTTAACCCACAAGATTTCGCCTGGCAAGGCTTAACGCTGACACCCGCAGCGGCGATACACATCCGTGAGCTGGTGGCAAAGCAGCCGGGTATGGTCGGCGTGCGCTTAGGCGTGAAGCAAACGGGCTGCGCGGGCTTTGGCTATGTGCTCGACAGTGTTAGCGAGCCGGACAAAGACGATCTGCTGTTTGAACACGACGGCGCGAAGCTGTTTGTCCCGCTGCAAGCGATGCCGTTTATTGATGGCACGGAAGTCGATTTCGTTCGTGAAGGACTTAATCAGATATTCAAATTTCACAACCCTAAAGCCCAGAATGAATGTGGCTGTGGCGAAAGCTTTGGGGTATAG", - "dna_sequence_length": 369, - "functions": [ - "Fe-S cluster assembly protein" - ], - "id": "CDS_1673", - "location": [ - [ - "NC_000913", - 1764386, - "-", - 369 - ] - ], - "md5": "ecf5c0bf671d1acc0e27835ffb22e138", - "parent_gene": "", - "protein_md5": "03ae0c2783e02563669bdfa97ca19a67", - "protein_translation": "MDMHSGTFNPQDFAWQGLTLTPAAAIHIRELVAKQPGMVGVRLGVKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDFVREGLNQIFKFHNPKAQNECGCGESFGV", - "protein_translation_length": 122, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ydiH" - ], - [ - "gene_synonym", - "EcoGene:EG13967" - ], - [ - "gene_synonym", - "ASAP:ABE-0005626" - ], - [ - "gene_synonym", - "ECK1682" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64476" - ], - [ - "gene_synonym", - "b1685" - ], - [ - "gene_synonym", - "NP_416200.2" - ], - [ - "gene_synonym", - "GeneID:946194" - ], - [ - "gene_synonym", - "GI:226524718" - ], - [ - "gene_synonym", - "JW1675" - ] - ], - "dna_sequence": "ATGTCTACTCAACTTGATCCCACCCAGCTGGCCATTGAATTTTTACGCCGTGACCAGAGCAATCTTTCACCTGCCCAATATCTCAAACGTCTGAAACAACTAGAACTTGAATTTGCTGACCTGCTTACTCTCTCTTCTGCTGAATTAAAAGAAGAAATCTACTTTGCCTGGCGTCTGGGCGTGCATTGA", - "dna_sequence_length": 189, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1674", - "location": [ - [ - "NC_000913", - 1765122, - "-", - 189 - ] - ], - "md5": "1e315fcf6d145b63c861dd049c283139", - "parent_gene": "", - "protein_md5": "37bdf2d308438ce9698e92c189bf8cb3", - "protein_translation": "MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTLSSAELKEEIYFAWRLGVH", - "protein_translation_length": 62, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77781" - ], - [ - "gene_synonym", - "ydiI" - ], - [ - "gene_synonym", - "GI:16129642" - ], - [ - "gene_synonym", - "ASAP:ABE-0005628" - ], - [ - "gene_synonym", - "ECK1683" - ], - [ - "gene_synonym", - "b1686" - ], - [ - "gene_synonym", - "NP_416201.1" - ], - [ - "gene_synonym", - "EcoGene:EG13968" - ], - [ - "gene_synonym", - "menI" - ], - [ - "gene_synonym", - "GeneID:946190" - ], - [ - "gene_synonym", - "JW1676" - ] - ], - "dna_sequence": "ATGATATGGAAACGGAAAATCACCCTGGAAGCACTGAATGCTATGGGTGAAGGAAACATGGTGGGGTTCCTGGATATTCGCTTTGAACATATTGGTGATGACACCCTTGAAGCGACAATGCCAGTAGACTCGCGGACAAAGCAGCCTTTCGGGTTGCTGCATGGAGGAGCATCCGTGGTACTGGCCGAAAGTATCGGTTCCGTTGCCGGTTATTTATGTACCGAAGGTGAGCAAAAAGTGGTTGGTCTGGAAATCAATGCTAACCACGTCCGCTCGGCACGAGAAGGGCGGGTGCGCGGCGTATGCAAACCGTTGCATCTCGGTTCGCGTCACCAGGTCTGGCAGATTGAAATCTTCGATGAGAAAGGGCGTTTGTGCTGTTCGTCACGATTGACGACCGCCATTTTGTGA", - "dna_sequence_length": 411, - "functions": [ - "1,4-dihydroxy-2-naphthoyl-CoA hydrolase" - ], - "id": "CDS_1675", - "location": [ - [ - "NC_000913", - 1765632, - "-", - 411 - ] - ], - "md5": "9d62aa1359e61a1e36c346d46a088d2e", - "parent_gene": "", - "protein_md5": "e2c9322164568340796281692e9f16a2", - "protein_translation": "MIWKRKITLEALNAMGEGNMVGFLDIRFEHIGDDTLEATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGRVRGVCKPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAIL", - "protein_translation_length": 136, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ydiJ" - ], - [ - "gene_synonym", - "GI:16129643" - ], - [ - "gene_synonym", - "NP_416202.1" - ], - [ - "gene_synonym", - "ECK1684" - ], - [ - "gene_synonym", - "GeneID:946189" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77748" - ], - [ - "gene_synonym", - "ASAP:ABE-0005632" - ], - [ - "gene_synonym", - "b1687" - ], - [ - "gene_synonym", - "EcoGene:EG13969" - ], - [ - "gene_synonym", - "JW1677" - ] - ], - "dna_sequence": "ATGATTCCACAGATTTCCCAGGCACCCGGCGTCGTTCAACTGGTGCTTAATTTTTTGCAAGAGCTGGAGCAACAAGGTTTTACCGGCGATACGGCGACAAGTTATGCCGATCGTCTGACAATGTCGACCGACAACAGTATTTACCAACTTCTCCCCGATGCGGTGGTATTTCCGCGTTCAACCGCAGATGTGGCGCTGATCGCCCGTCTTGCCGCGCAGGAACGCTATTCATCGCTGATCTTTACCCCCCGCGGCGGCGGCACCGGCACTAACGGTCAGGCGCTCAACCAGGGGATTATTGTTGATATGTCCCGCCATATGAACCGCATCATCGAAATTAACCCTGAAGAGGGCTGGGTGCGCGTTGAGGCCGGGGTGATAAAAGATCAACTCAATCAGTACCTGAAACCGTTCGGCTACTTTTTTGCGCCGGAACTTTCGACCAGCAACCGGGCAACGCTCGGTGGGATGATCAATACCGATGCATCCGGTCAGGGATCGCTGGTCTATGGCAAAACGTCAGATCACGTACTTGGCGTACGCGCGGTGTTGTTGGGGGGCGATATTCTCGATACGCAACCTTTACCCGTCGAATTGGCGGAAACGCTGGGTAAATCCAATACCACAATCGGGCGAATTTATAACACGGTTTATCAACGTTGCCGTCAGCAACGCCAGTTAATTATCGACAACTTCCCCAAACTTAACCGCTTTCTTACCGGTTACGATCTGCGTCATGTCTTTAACGATGAGATGACCGAGTTCGACCTGACGCGCATTCTGACGGGTTCAGAAGGGACGCTGGCCTTTATTACCGAAGCGCGGCTGGATATTACACGCTTGCCTAAAGTGCGCCGTCTGGTGAACGTCAAATATGACTCTTTTGACTCTGCGCTGCGTAACGCGCCGTTTATGGTTGAGGCGCGGGCGCTTTCGGTAGAGACGGTGGACTCAAAAGTGCTGAATCTGGCGCGGGAAGATATTGTCTGGCATTCCGTCAGCGAGTTGATTACCGATGTGCCTGACCAAGAGATGCTCGGGCTGAACATTGTGGAATTTGCTGGTGATGATGAGGCGCTGATTGATGAGCGGGTAAATGCACTCTGTGCGCGGTTGGATGAGCTGATCGCCAGTCATCAAGCAGGTGTCATCGGCTGGCAGGTGTGCCGTGAGCTGGCGGGGGTTGAACGTATCTATGCAATGCGCAAAAAAGCCGTTGGTCTGCTTGGCAATGCCAAAGGTGCCGCTAAGCCAATTCCGTTTGCTGAGGATACCTGCGTACCGCCGGAACACCTGGCGGATTATATTGCTGAATTTCGCGCGCTGCTCGACAGCCACGGCTTAAGCTACGGTATGTTCGGTCACGTCGACGCAGGTGTCTTGCACGTCCGTCCAGCGCTGGATATGTGCGATCCTCAACAAGAGATTTTGATGAAGCAAATCTCTGATGACGTGGTGGCGCTGACTGCGAAATACGGTGGTTTGTTGTGGGGCGAGCACGGCAAAGGTTTTCGCGCTGAATACAGCCCGGCGTTTTTCGGTGAGGAACTTTTTGCAGAACTGCGCAAAGTGAAAGCGGCATTTGACCCGCATAACCGACTCAACCCAGGGAAGATTTGCCCGCCAGAAGGTCTCGATGCGCCGATGATGAAAGTGGACGCGGTGAAGCGCGGTACATTCGATCGGCAGATCCCCATTGCGGTACGCCAGCAGTGGCGCGGTGCGATGGAGTGTAACGGCAACGGTTTATGCTTCAACTTTGATGCCCGTAGTCCGATGTGTCCGTCGATGAAGATCACCCAGAACCGGATTCATTCACCGAAAGGGCGCGCAACGCTGGTGCGTGAATGGCTGCGTTTGTTGGCGGATCGCGGCGTTGATCCACTCAAACTGGAACAAGAACTGCCTGAATCCGGCGTCAGTTTGCGGACGTTAATTGCCCGCACGCGCAATAGCTGGCATGCGAATAAAGGCGAATATGACTTCTCACACGAAGTCAAAGAGGCGATGTCGGGCTGTCTGGCCTGTAAAGCGTGTTCGACCCAGTGCCCCATCAAAATTGATGTGCCGGAGTTTCGCTCTCGTTTTCTGCAGCTCTATCACACCCGTTATTTACGCCCGCTGCGCGACCACCTCGTCGCTACGGTCGAGAGCTACGCGCCGCTGATGGCACGCGCGCCGAAAACCTTTAACTTCTTCATTAACCAGCCGCTGGTGCGCAAACTCTCGGAAAAACATATCGGCATGGTTGATTTGCCGCTGCTGTCGGTCCCCTCGCTACAACAACAAATGGTGGGGCATCGCTCGGCAAACATGACGCTGGAACAGCTTGAATCTCTCAATGCAGAGCAGAAAGCGCGCACAGTGTTGGTGGTGCAGGACCCCTTTACCAGCTATTACGATGCGCAAGTGGTGGCGGATTTTGTCCGTCTGGTCGAAAAATTAGGTTTCCAGCCTGTGTTACTGCCATTTTCGCCAAATGGCAAAGCCCAGCATATTAAAGGTTTTCTTAATCGTTTTGCGAAGACGGCGAAAAAGACGGCGGATTTCCTCAACCGTATGGCGAAGCTGGGTATGCCAATGGTGGGCGTCGATCCGGCGCTGGTACTTTGTTATCGCGATGAATATAAACTGGCGCTGGGCGAGGAGCGTGGCGAGTTTAACGTCTTACTGGCGAATGAATGGCTGGCAAGCGCACTTGAGTCACAGCCAGTGGCTACAGTCAGCGGTGAATCATGGTATTTCTTTGGTCACTGTACCGAAGTTACCGCCTTGCCGGGTGCGCCAGCACAATGGGCCGCGATATTTGCCCGTTTTGGCGCGAAACTGGAAAATGTCAGCGTGGGTTGCTGCGGCATGGCAGGGACTTACGGACATGAAGCGAAAAACCATGAAAATTCGCTCGGGATCTATGAGTTATCCTGGCATCAGGCTATGCAGCGACTGCCGCGTAACCGCTGTCTGGCGACCGGATATTCCTGCCGTAGCCAGGTAAAACGGGTTGAAGGCACGGGGGTACGCCATCCTGTGCAGGCTTTACTGGAGATTATTAAATGA", - "dna_sequence_length": 3057, - "functions": [ - "putative FAD-linked oxidoreductase" - ], - "id": "CDS_1676", - "location": [ - [ - "NC_000913", - 1768685, - "-", - 3057 - ] - ], - "md5": "327b9eb386924f91bd61b76552d894c1", - "parent_gene": "", - "protein_md5": "7ac95aa26abcf7a0626b36dc9ce59384", - "protein_translation": "MIPQISQAPGVVQLVLNFLQELEQQGFTGDTATSYADRLTMSTDNSIYQLLPDAVVFPRSTADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVDMSRHMNRIIEINPEEGWVRVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINTDASGQGSLVYGKTSDHVLGVRAVLLGGDILDTQPLPVELAETLGKSNTTIGRIYNTVYQRCRQQRQLIIDNFPKLNRFLTGYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARLDITRLPKVRRLVNVKYDSFDSALRNAPFMVEARALSVETVDSKVLNLAREDIVWHSVSELITDVPDQEMLGLNIVEFAGDDEALIDERVNALCARLDELIASHQAGVIGWQVCRELAGVERIYAMRKKAVGLLGNAKGAAKPIPFAEDTCVPPEHLADYIAEFRALLDSHGLSYGMFGHVDAGVLHVRPALDMCDPQQEILMKQISDDVVALTAKYGGLLWGEHGKGFRAEYSPAFFGEELFAELRKVKAAFDPHNRLNPGKICPPEGLDAPMMKVDAVKRGTFDRQIPIAVRQQWRGAMECNGNGLCFNFDARSPMCPSMKITQNRIHSPKGRATLVREWLRLLADRGVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEYDFSHEVKEAMSGCLACKACSTQCPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYAPLMARAPKTFNFFINQPLVRKLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLESLNAEQKARTVLVVQDPFTSYYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRFAKTAKKTADFLNRMAKLGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASALESQPVATVSGESWYFFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHEAKNHENSLGIYELSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK", - "protein_translation_length": 1018, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946183" - ], - [ - "gene_synonym", - "NP_416203.1" - ], - [ - "gene_synonym", - "GI:16129644" - ], - [ - "gene_synonym", - "ECK1685" - ], - [ - "gene_synonym", - "ASAP:ABE-0005637" - ], - [ - "gene_synonym", - "ydiK" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFS7" - ], - [ - "gene_synonym", - "EcoGene:EG13970" - ], - [ - "gene_synonym", - "b1688" - ], - [ - "gene_synonym", - "JW1678" - ] - ], - "dna_sequence": "ATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCGGTGCTGTTTTTAGCCATCATGATTGTGGCATGTCTGTGGATTGTTCAACCCTTTATTCTCGGCTTTGCATGGGCCGGTACGGTGGTTATCGCCACCTGGCCGGTATTGTTACGTTTGCAAAAGATCATGTTTGGCCGCCGCTCTCTCGCCGTTCTGGTGATGACGCTGTTATTAGTGATGGTGTTTATCATCCCTATTGCTTTGCTGGTTAACAGTATCGTCGACGGCAGCGGCCCGCTAATTAAAGCCATTTCCAGCGGTGACATGACGTTACCCGATCTGGCGTGGCTTAATACCATTCCGGTGATTGGCGCGAAGCTGTATGCAGGCTGGCACAACTTGCTGGATATGGGGGGGACGGCGATCATGGCGAAAGTCCGCCCTTATATTGGCACCACCACCACCTGGTTCGTTGGGCAGGCGGCGCATATCGGGCGCTTTATGGTGCATTGTGCGCTGATGCTTCTCTTCAGTGCCCTGCTGTACTGGCGCGGTGAACAGGTGGCACAAGGCATTCGCCATTTTGCAACCCGTCTGGCAGGCGTTCGCGGAGATGCCGCCGTGCTGCTGGCGGCACAGGCTATCCGCGCGGTGGCGCTGGGTGTGGTGGTGACGGCGTTAGTACAGGCAGTGCTTGGCGGTATCGGCCTCGCCGTATCCGGCGTACCTTATGCAACGTTGCTAACGGTGTTAATGATCCTCTCCTGCCTTGTCCAGCTTGGCCCGTTGCCGGTACTGATTCCGGCGATTATCTGGCTCTACTGGACTGGCGATACCACCTGGGGAACGGTATTGTTAGTGTGGAGCGGTGTGGTTGGCACGCTGGATAACGTCATCCGCCCAATGTTAATTCGCATGGGTGCCGATTTACCGCTGATCCTGATTCTCTCTGGCGTTATTGGTGGTTTGATTGCTTTCGGGATGATCGGTCTGTTTATTGGTCCGGTTCTGTTAGCCGTTTCCTGGCGTCTGTTTGCCGCGTGGGTGGAAGAAGTCCCGCCGCCGACGGACCAACCGGAAGAAATTCTCGAAGAACTTGGCGAAATCGAGAAACCGAATAAGTAA", - "dna_sequence_length": 1113, - "functions": [ - "UPF0118 family inner membrane protein" - ], - "id": "CDS_1677", - "location": [ - [ - "NC_000913", - 1769074, - "+", - 1113 - ] - ], - "md5": "2d174ebbc940c9bb14c3646972266428", - "parent_gene": "", - "protein_md5": "94908636efdf36c16faa3c2ed0674250", - "protein_translation": "MVNVRQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISSGDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHIGRFMVHCALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWSGVVGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQPEEILEELGEIEKPNK", - "protein_translation_length": 370, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946181" - ], - [ - "gene_synonym", - "ydiL" - ], - [ - "gene_synonym", - "ASAP:ABE-0005641" - ], - [ - "gene_synonym", - "ECK1687" - ], - [ - "gene_synonym", - "NP_416204.2" - ], - [ - "gene_synonym", - "GI:90111316" - ], - [ - "gene_synonym", - "JW1679" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76196" - ], - [ - "gene_synonym", - "EcoGene:EG13971" - ], - [ - "gene_synonym", - "b1689" - ] - ], - "dna_sequence": "ATGAACGCTTATGAACTCCAGGCACTCCGCCATATTTTTGCCATGACTATTGATGAATGCGCGACCTGGATTGCCCAGACCGGTGACAGTGAAAGCTGGCGTCAGTGGGAAAATGGCAAGTGTGCCATTCCTGATCGTGTAGTCGAGCAACTGTTGGCTATGCGTCAGCAAAGAAAAAAACATCTTCATGCCATCATAGAGAAAATAAATAACCGCATCGGCAACAACACCATGCGTTTTTTCCCCGACTTAACCGCATTTCAACGAGTCTACCCTGATGGCAATTTTATTGACTGGAAGATCTATCAATCGGTAGCTGCTGAATTATATGCACACGATCTGGAGCGGCTTTGTTAA", - "dna_sequence_length": 357, - "functions": [ - "putative HTH domain DNA-binding protein" - ], - "id": "CDS_1678", - "location": [ - [ - "NC_000913", - 1770615, - "+", - 357 - ] - ], - "md5": "179e83f3ada194f0353256b943abdde6", - "parent_gene": "", - "protein_md5": "6b278f8cbf949d55f7766a6113ae157a", - "protein_translation": "MNAYELQALRHIFAMTIDECATWIAQTGDSESWRQWENGKCAIPDRVVEQLLAMRQQRKKHLHAIIEKINNRIGNNTMRFFPDLTAFQRVYPDGNFIDWKIYQSVAAELYAHDLERLC", - "protein_translation_length": 118, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1688" - ], - [ - "gene_synonym", - "GI:16129646" - ], - [ - "gene_synonym", - "b1690" - ], - [ - "gene_synonym", - "ASAP:ABE-0005645" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76197" - ], - [ - "gene_synonym", - "NP_416205.1" - ], - [ - "gene_synonym", - "JW1680" - ], - [ - "gene_synonym", - "GeneID:946196" - ], - [ - "gene_synonym", - "EcoGene:EG13972" - ], - [ - "gene_synonym", - "ydiM" - ] - ], - "dna_sequence": "ATGAAAAATCCCTATTTCCCTACCGCACTTGGGTTGTATTTTAATTACCTGGTGCATGGTATGGGCGTCCTTTTGATGAGCCTGAATATGGCCTCGCTGGAGACACTTTGGCAGACTAATGCCGCGGGTGTCTCGATAGTTATCTCATCGCTGGGCATTGGTCGATTAAGTGTCTTGCTTTTTGCAGGATTATTATCCGATCGCTTTGGTCGCCGCCCTTTTATCATGCTCGGGATGTGCTGCTATATGGCCTTCTTTTTTGGCATCCTGCAGACCAATAACATCATTATCGCTTATGTTTTTGGCTTTCTGGCGGGAATGGCAAACAGTTTTCTCGATGCAGGCACTTATCCCAGTTTGATGGAAGCTTTTCCACGCTCACCTGGGACAGCCAATATTTTAATTAAAGCATTTGTTTCCAGCGGACAATTTTTATTACCGCTAATCATTAGCCTGTTAGTGTGGGCTGAACTGTGGTTCGGTTGGTCCTTTATGATTGCTGCAGGCATTATGTTTATTAACGCTCTGTTTTTATACCGTTGTACGTTCCCACCCCATCCGGGTCGTCGCTTACCTGTCATAAAGAAAACCACCAGCTCTACGGAACATCGCTGTTCAATTATCGATTTAGCCAGTTATACCTTATATGGCTATATCTCAATGGCAACGTTTTATCTGGTTAGCCAGTGGCTGGCACAGTACGGACAATTTGTTGCAGGCATGTCATACACTATGTCGATCAAACTACTCAGTATCTACACCGTGGGTTCGCTGCTTTGTGTATTTATTACCGCTCCACTCATTCGTAATACCGTTCGCCCAACAACATTACTGATGCTGTACACCTTTATCTCATTTATTGCTCTGTTTACCGTCTGCCTGCATCCCACATTTTATGTGGTGATAATATTTGCTTTTGTCATTGGTTTTACCTCTGCTGGAGGTGTTGTGCAAATTGGCCTGACGTTAATGGCTGAACGTTTCCCTTACGCTAAAGGTAAAGCTACAGGGATCTATTACAGTGCGGGCAGTATTGCGACCTTTACTATTCCGTTGATTACGGCTCATCTGTCCCAAAGAAGTATTGCCGATATTATGTGGTTCGATACCGCCATCGCTGCCATCGGTTTTTTACTGGCACTGTTTATCGGCTTACGCAGCCGCAAAAAAACGCGGCATCACTCGCTAAAGGAAAATGTCGCTCCGGGTGGGTAA", - "dna_sequence_length": 1215, - "functions": [ - "putative MFS transporter, membrane protein" - ], - "id": "CDS_1679", - "location": [ - [ - "NC_000913", - 1771071, - "+", - 1215 - ] - ], - "md5": "38e52c734b5a744b09bd295c67e45b82", - "parent_gene": "", - "protein_md5": "199ca642f96356d145f963169ae4d78c", - "protein_translation": "MKNPYFPTALGLYFNYLVHGMGVLLMSLNMASLETLWQTNAAGVSIVISSLGIGRLSVLLFAGLLSDRFGRRPFIMLGMCCYMAFFFGILQTNNIIIAYVFGFLAGMANSFLDAGTYPSLMEAFPRSPGTANILIKAFVSSGQFLLPLIISLLVWAELWFGWSFMIAAGIMFINALFLYRCTFPPHPGRRLPVIKKTTSSTEHRCSIIDLASYTLYGYISMATFYLVSQWLAQYGQFVAGMSYTMSIKLLSIYTVGSLLCVFITAPLIRNTVRPTTLLMLYTFISFIALFTVCLHPTFYVVIIFAFVIGFTSAGGVVQIGLTLMAERFPYAKGKATGIYYSAGSIATFTIPLITAHLSQRSIADIMWFDTAIAAIGFLLALFIGLRSRKKTRHHSLKENVAPGG", - "protein_translation_length": 404, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005648" - ], - [ - "gene_synonym", - "ECK1689" - ], - [ - "gene_synonym", - "ydiN" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76198" - ], - [ - "gene_synonym", - "JW5274" - ], - [ - "gene_synonym", - "b1691" - ], - [ - "gene_synonym", - "GeneID:946198" - ], - [ - "gene_synonym", - "GI:226524719" - ], - [ - "gene_synonym", - "NP_416206.6" - ], - [ - "gene_synonym", - "EcoGene:EG13973" - ] - ], - "dna_sequence": "ATGTCTCAAAATAAGGCTTTCAGCACGCCATTTATCCTGGCTGTTCTTTGTATTTACTTCAGCTACTTCCTGCACGGCATTAGTGTTATTACGCTTGCCCAAAATATGTCATCTCTGGCGGAAAAGTTTTCCACTGACAACGCGGGCATTGCCTACTTAATTTCCGGTATCGGTTTGGGGCGATTGATCAGTATTTTATTCTTCGGTGTGATCTCCGATAAGTTTGGTCGTCGGGCGGTGATATTAATGGCAGTAATAATGTATCTGCTATTCTTCTTTGGTATTCCCGCTTGCCCGAATTTAACTCTCGCCTACGGTCTGGCAGTGTGCGTAGGTATCGCTAACTCAGCGCTGGATACGGGTGGCTACCCCGCGCTCATGGAATGCTTTCCGAAAGCCTCTGGTTCGGCGGTCATACTGGTTAAAGCGATGGTGTCATTTGGGCAAATGTTCTACCCAATGCTGGTGAGCTATATGTTGCTCAATAATATCTGGTACGGCTATGGGCTGATTATTCCGGGTATTCTATTTGTACTGATCACGCTGATGCTGTTGAAAAGCAAATTCCCCAGCCAGTTGGTGGACGCCAGCGTAACTAATGAATTACCGCAAATGAACAGCAAACCGTTAGTCTGGCTGGAAGGTGTTTCATCGGTACTGTTCGGTGTAGCCGCATTCTCGACCTTTTATGTGATTGTGGTGTGGATGCCCAAATATGCGATGGCTTTTGCTGGTATGTCAGAAGCTGAGGCATTAAAAACCATCTCTTATTACAGTATGGGCTCGTTGGTCTGTGTCTTTATTTTTGCCGCACTACTGAAAAAAATGGTCCGGCCCATCTGGGCTAATGTATTTAACTCTGCACTGGCAACAATAACAGCAGCCATTATCTACCTGTACCCTTCTCCACTGGTGTGCAATGCCGGAGCCTTTGTTATCGGTTTCTCAGCAGCTGGCGGCATTTTACAGCTCGGCGTTTCGGTCATGTCAGAGTTTTTTCCCAAAAGCAAAGCCAAAGTCACCAGTATTTATATGATGATGGGTGGACTGGCTAACTTTGTTATTCCACTGATTACCGGTTATCTGTCGAACATCGGCCTGCAATATATCATTGTTCTCGATTTTACTTTCGCGCTGCTGGCCCTGATTACCGCAATTATTGTTTTTATCCGCTATTACCGCGTTTTCATTATTCCTGAAAATGATGTGCGGTTTGGCGAGCGTAAATTTTGCACCCGGTTAAACACAATTAAGCATAGAGGTTAA", - "dna_sequence_length": 1266, - "functions": [ - "putative MFS transporter, membrane protein" - ], - "id": "CDS_1680", - "location": [ - [ - "NC_000913", - 1772512, - "+", - 1266 - ] - ], - "md5": "5ca870b05911d6254b034b0559a18375", - "parent_gene": "", - "protein_md5": "3ddd81c2d109298cbcfb775bf22c0328", - "protein_translation": "MSQNKAFSTPFILAVLCIYFSYFLHGISVITLAQNMSSLAEKFSTDNAGIAYLISGIGLGRLISILFFGVISDKFGRRAVILMAVIMYLLFFFGIPACPNLTLAYGLAVCVGIANSALDTGGYPALMECFPKASGSAVILVKAMVSFGQMFYPMLVSYMLLNNIWYGYGLIIPGILFVLITLMLLKSKFPSQLVDASVTNELPQMNSKPLVWLEGVSSVLFGVAAFSTFYVIVVWMPKYAMAFAGMSEAEALKTISYYSMGSLVCVFIFAALLKKMVRPIWANVFNSALATITAAIIYLYPSPLVCNAGAFVIGFSAAGGILQLGVSVMSEFFPKSKAKVTSIYMMMGGLANFVIPLITGYLSNIGLQYIIVLDFTFALLALITAIIVFIRYYRVFIIPENDVRFGERKFCTRLNTIKHRG", - "protein_translation_length": 421, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11234" - ], - [ - "gene_synonym", - "GeneID:946200" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6D5" - ], - [ - "gene_synonym", - "NP_416207.1" - ], - [ - "gene_synonym", - "GI:16129648" - ], - [ - "gene_synonym", - "ydiB" - ], - [ - "gene_synonym", - "ASAP:ABE-0005651" - ], - [ - "gene_synonym", - "JW1682" - ], - [ - "gene_synonym", - "b1692" - ], - [ - "gene_synonym", - "ECK1690" - ] - ], - "dna_sequence": "ATGGATGTTACCGCAAAATACGAATTGATTGGGTTGATGGCCTATCCTATCCGCCACAGTTTATCGCCCGAAATGCAGAATAAAGCCTTAGAAAAAGCGGGATTGCCATTTACCTATATGGCCTTCGAAGTGGATAACGATAGCTTTCCTGGAGCAATTGAAGGATTAAAAGCCCTCAAAATGCGCGGAACTGGTGTATCGATGCCGAACAAACAACTGGCGTGTGAATATGTTGATGAATTAACACCAGCTGCCAAACTGGTGGGGGCCATCAACACCATCGTTAATGATGATGGCTATCTGCGTGGCTATAACACCGACGGCACGGGCCATATTCGCGCCATTAAAGAGAGCGGTTTTGATATCAAAGGCAAAACGATGGTGCTGTTAGGGGCCGGTGGTGCCTCAACGGCAATTGGCGCGCAGGGGGCAATTGAAGGTTTAAAAGAAATTAAACTCTTTAACCGTCGGGATGAGTTCTTCGATAAAGCCCTCGCCTTCGCGCAGCGGGTTAATGAAAACACCGATTGTGTCGTCACGGTCACCGATCTCGCCGATCAGCAAGCCTTTGCTGAAGCCCTGGCTTCCGCCGACATTTTAACCAATGGCACAAAAGTGGGTATGAAACCCCTTGAGAATGAATCATTGGTTAATGATATCAGTCTGTTACATCCGGGACTTCTGGTCACTGAATGCGTGTATAACCCGCATATGACGAAGTTATTGCAGCAGGCGCAACAAGCTGGTTGCAAAACGATTGATGGATACGGCATGTTGTTGTGGCAAGGGGCTGAACAGTTCACATTATGGACTGGCAAAGATTTCCCTCTGGAATATGTTAAACAGGTCATGGGGTTCGGTGCCTGA", - "dna_sequence_length": 867, - "functions": [ - "quinate/shikimate 5-dehydrogenase, NAD(P)-binding" - ], - "id": "CDS_1681", - "location": [ - [ - "NC_000913", - 1773789, - "+", - 867 - ] - ], - "md5": "a276dd09d71a43af48848cfb0fa2adf7", - "parent_gene": "", - "protein_md5": "7aefe9d44cfe2be509938a25c6cc7fee", - "protein_translation": "MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVMGFGA", - "protein_translation_length": 288, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05194" - ], - [ - "gene_synonym", - "ASAP:ABE-0005653" - ], - [ - "gene_synonym", - "EcoGene:EG10076" - ], - [ - "gene_synonym", - "GeneID:946210" - ], - [ - "gene_synonym", - "GI:16129649" - ], - [ - "gene_synonym", - "ECK1691" - ], - [ - "gene_synonym", - "NP_416208.1" - ], - [ - "gene_synonym", - "aroD" - ], - [ - "gene_synonym", - "JW1683" - ], - [ - "gene_synonym", - "b1693" - ] - ], - "dna_sequence": "ATGAAAACCGTAACTGTAAAAGATCTCGTCATTGGTACGGGCGCACCTAAAATCATCGTCTCGCTGATGGCGAAAGATATCGCCAGCGTGAAATCCGAAGCTCTCGCCTATCGTGAAGCGGACTTTGATATTCTGGAATGGCGTGTGGACCACTATGCCGACCTCTCCAATGTGGAGTCTGTCATGGCGGCAGCAAAAATTCTCCGTGAGACCATGCCAGAAAAACCGCTGCTGTTTACCTTCCGCAGTGCCAAAGAAGGCGGCGAGCAGGCGATTTCCACCGAGGCTTATATTGCACTCAATCGTGCAGCCATCGACAGCGGCCTGGTTGATATGATCGATCTGGAGTTATTTACCGGTGATGATCAGGTTAAAGAAACCGTCGCCTACGCCCACGCGCATGATGTGAAAGTAGTCATGTCCAACCATGACTTCCATAAAACGCCGGAAGCCGAAGAAATCATTGCCCGTCTGCGCAAAATGCAATCCTTCGACGCCGATATTCCTAAGATTGCGCTGATGCCGCAAAGTACCAGCGATGTGCTGACGTTGCTTGCCGCGACCCTGGAGATGCAGGAGCAGTATGCCGATCGTCCAATTATCACGATGTCGATGGCAAAAACTGGCGTAATTTCTCGTCTGGCTGGTGAAGTATTTGGCTCGGCGGCAACTTTTGGTGCGGTAAAAAAAGCGTCTGCGCCAGGGCAAATCTCGGTAAATGATTTGCGCACGGTATTAACTATTTTACACCAGGCATAA", - "dna_sequence_length": 759, - "functions": [ - "3-dehydroquinate dehydratase" - ], - "id": "CDS_1682", - "location": [ - [ - "NC_000913", - 1774686, - "+", - 759 - ] - ], - "md5": "84571b8374eef90b8d96472692920f2f", - "parent_gene": "", - "protein_md5": "2430db0e67ee8cbbeb6c0d725090a453", - "protein_translation": "MKTVTVKDLVIGTGAPKIIVSLMAKDIASVKSEALAYREADFDILEWRVDHYADLSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNRAAIDSGLVDMIDLELFTGDDQVKETVAYAHAHDVKVVMSNHDFHKTPEAEEIIARLRKMQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEVFGSAATFGAVKKASAPGQISVNDLRTVLTILHQA", - "protein_translation_length": 252, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005656" - ], - [ - "gene_synonym", - "GI:16129650" - ], - [ - "gene_synonym", - "GeneID:946211" - ], - [ - "gene_synonym", - "ECK1692" - ], - [ - "gene_synonym", - "NP_416209.1" - ], - [ - "gene_synonym", - "EcoGene:EG12432" - ], - [ - "gene_synonym", - "ydiF" - ], - [ - "gene_synonym", - "b1694" - ], - [ - "gene_synonym", - "JW1684" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37766" - ] - ], - "dna_sequence": "ATGAAACCTGTAAAACCACCTCGTATTAATGGACGAGTGCCGGTCCTGTCGGCACAGGAAGCGGTGAATTATATTCCCGACGAAGCAACACTTTGTGTGTTAGGCGCTGGCGGCGGTATTCTGGAAGCCACCACGTTAATTACTGCTCTTGCTGATAAATATAAACAGACTCAAACACCACGTAATTTATCGATTATTAGTCCAACAGGGCTTGGCGATCGCGCCGACCGTGGTATTAGTCCTCTGGCGCAAGAAGGTCTGGTGAAATGGGCATTATGTGGTCACTGGGGACAATCGCCGCGTATTTCTGAACTCGCAGAACAAAATAAAATTATTGCTTATAACTACCCACAAGGTGTACTTACACAAACCTTACGCGCCGCCGCAGCCCACCAGCCTGGTATTATTAGTGATATTGGCATCGGGACATTTGTCGATCCACGCCAGCAAGGCGGCAAACTGAATGAAGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTACGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAAAGCCACGCTGCATCCTAAATCTGTCCGTATTCCGGGTTATCTGGTGGATATTGTGGTGGTCGATCCGGATCAAACCCAACTGTATGGCGGTGCACCGGTTAACCGCTTTATTTCTGGTGACTTCACCCTTGATGACAGTACCAAACTTAGCCTGCCCCTAAACCAACGTAAATTAGTTGCGCGGCGCGCATTATTCGAAATGCGTAAAGGCGCGGTGGGGAATGTCGGCGTCGGTATTGCTGACGGCATTGGCCTGGTCGCCCGAGAAGAAGGTTGTGCTGATGACTTTATTCTGACGGTAGAAACAGGTCCGATTGGCGGAATTACTTCACAGGGGATCGCCTTTGGCGCGAACGTGAATACCCGTGCCATTCTGGATATGACGTCCCAGTTTGATTTTTATCACGGTGGCGGTCTGGATGTTTGTTATTTGAGTTTTGCTGAAGTCGACCAGCACGGTAACGTCGGCGTGCATAAATTCAATGGTAAAATCATGGGCACCGGTGGATTTATTGATATCAGTGCCACTTCGAAGAAAATCATTTTCTGCGGCACATTAACTGCGGGCAGTTTAAAAACAGAAATTACCGACGGCAAATTAAATATCGTCCAGGAAGGACGGGTGAAGAAATTTATTCGGGAACTACCGGAAATTACTTTCAGCGGAAAAATCGCTCTCGAGCGAGGGCTGGATGTTCGTTATATCACTGAGCGCGCAGTATTCACGCTGAAAGAAGACGGCCTGCATTTAATCGAAATCGCCCCTGGCGTCGATTTACAAAAAGATATTCTCGACAAAATGGATTTCACCCCAGTGATTTCGCCAGAACTCAAACTGATGGACGAAAGATTATTTATCGATGCGGCGATGGGTTTTGTCCTGCCTGAAGCGGCTCATTAA", - "dna_sequence_length": 1596, - "functions": [ - "putative acetyl-CoA:acetoacetyl-CoA transferase: alpha subunit/beta subunit" - ], - "id": "CDS_1683", - "location": [ - [ - "NC_000913", - 1775587, - "+", - 1596 - ] - ], - "md5": "2e84e07dce34f9b13f489126b94fa986", - "parent_gene": "", - "protein_md5": "555fcc3bb0c13a8b15dff7efdb719a87", - "protein_translation": "MKPVKPPRINGRVPVLSAQEAVNYIPDEATLCVLGAGGGILEATTLITALADKYKQTQTPRNLSIISPTGLGDRADRGISPLAQEGLVKWALCGHWGQSPRISELAEQNKIIAYNYPQGVLTQTLRAAAAHQPGIISDIGIGTFVDPRQQGGKLNEVTKEDLIKLVEFDNKEYLYYKAIAPDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNNGGIVMMQVQKMVKKATLHPKSVRIPGYLVDIVVVDPDQTQLYGGAPVNRFISGDFTLDDSTKLSLPLNQRKLVARRALFEMRKGAVGNVGVGIADGIGLVAREEGCADDFILTVETGPIGGITSQGIAFGANVNTRAILDMTSQFDFYHGGGLDVCYLSFAEVDQHGNVGVHKFNGKIMGTGGFIDISATSKKIIFCGTLTAGSLKTEITDGKLNIVQEGRVKKFIRELPEITFSGKIALERGLDVRYITERAVFTLKEDGLHLIEIAPGVDLQKDILDKMDFTPVISPELKLMDERLFIDAAMGFVLPEAAH", - "protein_translation_length": 531, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416210.4" - ], - [ - "gene_synonym", - "ydiO" - ], - [ - "gene_synonym", - "ECK1693" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9U8" - ], - [ - "gene_synonym", - "JW5275" - ], - [ - "gene_synonym", - "b1695" - ], - [ - "gene_synonym", - "ASAP:ABE-0005658" - ], - [ - "gene_synonym", - "GeneID:945626" - ], - [ - "gene_synonym", - "EcoGene:EG13974" - ], - [ - "gene_synonym", - "GI:90111318" - ] - ], - "dna_sequence": "ATGGATTTTTCTTTAACTGAAGAACAAGAACTGCTGCTGGCCAGTATTCGCGAACTGATTACGACTAACTTTCCGGAAGAGTATTTCCGCACCTGCGATCAAAACGGGACATATCCGCGTGAGTTTATGCGGGCGCTGGCGGATAACGGTATTTCCATGCTTGGCGTGCCGGAAGAATTTGGTGGTATCCCTGCGGATTACGTCACCCAAATGCTGGCGCTGATGGAAGTGTCAAAATGCGGTGCTCCGGCATTTTTAATTACCAACGGTCAATGTATTCACAGTATGCGCCGTTTCGGTTCTGCAGAGCAGCTACGTAAAACGGCAGAGAGCACCCTGGAAACGGGTGATCCCGCCTATGCCCTGGCGTTGACGGAACCAGGTGCTGGCTCAGATAACAACAGTGCCACTACCACTTACACGCGTAAAAACGGCAAGGTCTACATCAACGGACAAAAAACCTTTATTACCGGTGCGAAAGAGTACCCGTATATGCTGGTGCTGGCGCGCGATCCGCAACCGAAAGATCCCAAAAAAGCCTTCACCCTGTGGTGGGTCGACTCCAGTAAGCCCGGCATTAAGATTAACCCGCTGCATAAAATCGGCTGGCATATGCTCAGCACCTGCGAAGTCTATCTCGACAACGTGGAGGTTGAAGAGAGCGACATGGTGGGCGAAGAAGGAATGGGTTTCCTCAATGTGATGTACAACTTTGAGATGGAGCGCCTGATCAACGCCGCGCGCAGCACCGGCTTTGCCGAATGCGCCTTTGAAGATGCCGCCCGCTATGCCAACCAACGTATCGCTTTTGGTAAGCCCATTGGTCATAACCAGATGATCCAGGAAAAACTGGCGCTGATGGCGATTAAGATCGACAACATGCGCAACATGGTGCTGAAAGTGGCATGGCAAGCCGATCAGCATCAGTCACTGCGCACCAGCGCGGCGCTGGCAAAACTGTACTGTGCACGTACCGCAATGGAAGTCATTGATGATGCGATTCAAATCATGGGCGGTCTGGGCTATACCGATGAGGCGCGCGTCTCCCGCTTCTGGCGTGATGTCCGTTGTGAACGTATCGGCGGCGGTACAGACGAAATTATGATTTACGTAGCAGGTCGGCAGATCCTGAAAGACTATCAGAACAAATAA", - "dna_sequence_length": 1152, - "functions": [ - "putative acyl-CoA dehydrogenase" - ], - "id": "CDS_1684", - "location": [ - [ - "NC_000913", - 1777196, - "+", - 1152 - ] - ], - "md5": "2076bfc11f3d1ce976a436a404d3edf4", - "parent_gene": "", - "protein_md5": "f4fbd7821c38d46764fc40e1be629d2d", - "protein_translation": "MDFSLTEEQELLLASIRELITTNFPEEYFRTCDQNGTYPREFMRALADNGISMLGVPEEFGGIPADYVTQMLALMEVSKCGAPAFLITNGQCIHSMRRFGSAEQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITGAKEYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPLHKIGWHMLSTCEVYLDNVEVEESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARYANQRIAFGKPIGHNQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALAKLYCARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKDYQNK", - "protein_translation_length": 383, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129652" - ], - [ - "gene_synonym", - "ASAP:ABE-0005660" - ], - [ - "gene_synonym", - "NP_416211.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77402" - ], - [ - "gene_synonym", - "GeneID:945095" - ], - [ - "gene_synonym", - "ECK1694" - ], - [ - "gene_synonym", - "JW1686" - ], - [ - "gene_synonym", - "EcoGene:EG13975" - ], - [ - "gene_synonym", - "b1696" - ], - [ - "gene_synonym", - "ydiP" - ] - ], - "dna_sequence": "ATGTATCAACGCTGTTTTGATAACGCCAGTGAAACGCTGTTTGTCGCCGGTAAAACGCCACGGCTTTCACGTTTTGCATTTAGCGATGATCCAAAATGGGAGTCCGGACATCACGTTCATGACAATGAAACCGAGTTGATTTACGTCAAGAAAGGGGTTGCAAGGTTTACCATCGATTCTTCGTTATATGTCGCACATGCGGATGACATTGTGGTGATAGAACGCGGCAGGCTGCATGCGGTGGCCTCTGACGTTAACGATCCGGCAACGACGTGTACCTGTGCGCTGTACGGCTTTCAGTTTCAGGGGGCTGAGGAAAATCAGCTACTGCAACCGCATTCTTGTCCGGTAATTGCCGCGGGGCAGGGAAAAGAAGTCATAAAAACCTTATTTAATGAGCTAAGTGTGATTTTGCCGCAAAGTAAAAATAGCCAAACATCTTCGTTATGGGATGCATTTGCCTATACGTTAGCCATTCTTTACTACGAAAATTTTAAAAATGCTTATCGTTCGGAGCAGGGGTATATTAAAAAAGATGTTCTGATAAAAGATATTCTTTTCTATCTGAATAATAATTATCGCGAAAAAATCACTTTAGAACAGTTATCGAAAAAATTTCGTGCCAGCGTCAGTTATATTTGCCATGAATTTACCAAAGAGTATCGTATTTCCCCTATTAACTATGTTATTCAACGGCGTATGACGGAAGCAAAATGGTCACTCACTAATACTGAATTATCACAGGCAGAGATCTCCTGGCGTGTGGGTTATGAAAATGTCGATCACTTTGCCAAACTGTTTTTGCGCCATGTCGGTTGTTCGCCCAGCGATTACCGTAGACAATTTAAAAACTGTTTTGCGGAACAAGAAATCCTATCTGAATTTCCTCAACCGGTAAGTCTTGTTGGATAA", - "dna_sequence_length": 912, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_1685", - "location": [ - [ - "NC_000913", - 1779301, - "-", - 912 - ] - ], - "md5": "ffdf30cd111d8064d665de3e49e3fbab", - "parent_gene": "", - "protein_md5": "eeb10359211ecbd77c0faa15f78e866c", - "protein_translation": "MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVSLVG", - "protein_translation_length": 303, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129653" - ], - [ - "gene_synonym", - "ASAP:ABE-0005666" - ], - [ - "gene_synonym", - "GeneID:946482" - ], - [ - "gene_synonym", - "JW5276" - ], - [ - "gene_synonym", - "ECK1695" - ], - [ - "gene_synonym", - "NP_416212.1" - ], - [ - "gene_synonym", - "b1697" - ], - [ - "gene_synonym", - "ydiQ" - ], - [ - "gene_synonym", - "EcoGene:EG13976" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76201" - ] - ], - "dna_sequence": "ATGAAAATAATAACCTGCTTTAAGCTGGTGCCTGAAGAACAGGACATTGTTGTCACTCCAGAATACACCCTGAATTTCGACAATGCCGACGCCAAAATCAGCCAGTTCGATCTCAATGCCATTGAAGCTGCAAGCCAGCTCGCAACAGATGACGATGAGATAGCCGCGCTGACCGTTGGCGGCTCATTGTTGCAGAACTCGAAAGTGCGCAAAGACGTGCTATCCCGCGGGCCGCACAGCCTGTATTTGGTGCAGGATGCGCAACTTGAACATGCACTGCCTCTCGATACCGCAAAAGCGCTGGCGGCAGCAATTGAAAAGATCGGCTTCGATTTACTGATCTTTGGTGAAGGTTCCGGCGACCTTTATGCCCAGCAGGTTGGCTTGCTGGTCGGAGAAATTCTGCAACTTCCGGTGATTAATGCAGTGAGTGCTATTCAGCGTCAGGGCAATACACTGGTGATTGAACGCACGCTTGAAGATGATGTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGA", - "dna_sequence_length": 765, - "functions": [ - "putative electron transfer flavoprotein subunit" - ], - "id": "CDS_1686", - "location": [ - [ - "NC_000913", - 1779617, - "+", - 765 - ] - ], - "md5": "b0bd876e0a350a1348abfcae1c1816a1", - "parent_gene": "", - "protein_md5": "76d7ec9a071eed255b8864d1b7ede0c3", - "protein_translation": "MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAASQLATDDDEIAALTVGGSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALAAAIEKIGFDLLIFGEGSGDLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLEDDVEVIELSVPAVLCVTSDINVPRIPSMKAILGAGKKPVNQWQASDIDWSQSAPLAELVGIRVPPQTERKHIIIDNDSPEAIAELAEHLKKALN", - "protein_translation_length": 254, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945688" - ], - [ - "gene_synonym", - "GI:16129654" - ], - [ - "gene_synonym", - "ASAP:ABE-0005668" - ], - [ - "gene_synonym", - "ECK1696" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77378" - ], - [ - "gene_synonym", - "NP_416213.1" - ], - [ - "gene_synonym", - "EcoGene:EG13977" - ], - [ - "gene_synonym", - "ydiR" - ], - [ - "gene_synonym", - "b1698" - ], - [ - "gene_synonym", - "JW1688" - ] - ], - "dna_sequence": "ATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGTCTTTATGTTCTTGCGCAAAACGACGCGCTGCAACGCACTGAAAATTACGCCGAAAGCATTGCTGCCCTGCTGAAAGATAAACACCCCGCTATGTTGCTGTTGGCCGCGACGAAACGTGGTAAAGCGCTGGCAGCACGGTTAAGTGTGCAACTGAATGCGGCGCTGGTGAACGATGCCACGGCGGTGGATATTGTCGATGGTCACATTTGCGCCGAACACCGGATGTATGGCGGGTTAGCGTTCGCTCAGGAAAAGATCAACAGCCCGCTGGCGATCATTACCCTTGCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACTGGATGGAGCGTGAACGTTATATCGGTGTCTCCGGCGTGTTGCTGAAATCCGATCTCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCGACTACGGTCTGGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGTTGAGCCGCTAA", - "dna_sequence_length": 939, - "functions": [ - "putative electron transfer flavoprotein, FAD-binding subunit" - ], - "id": "CDS_1687", - "location": [ - [ - "NC_000913", - 1780401, - "+", - 939 - ] - ], - "md5": "51e7705d896d4b6bdd2959b9547895a4", - "parent_gene": "", - "protein_md5": "c2a577597e15da77d3527807221f5bf5", - "protein_translation": "MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTDQAQAVMPYGPKCLYVLAQNDALQRTENYAESIAALLKDKHPAMLLLAATKRGKALAARLSVQLNAALVNDATAVDIVDGHICAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTSDTSHQCPTETVPYVAPRHEILCRERRAKAASSVDLSKAKRVVGVGRGLAAQDDLKMVHELAAVLNAEVGCSRPIAEGENWMERERYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNYADYGLVGDIYKVVPALISQLSR", - "protein_translation_length": 312, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005671" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77337" - ], - [ - "gene_synonym", - "GI:16129655" - ], - [ - "gene_synonym", - "NP_416214.1" - ], - [ - "gene_synonym", - "GeneID:946212" - ], - [ - "gene_synonym", - "ECK1697" - ], - [ - "gene_synonym", - "EcoGene:EG13978" - ], - [ - "gene_synonym", - "ydiS" - ], - [ - "gene_synonym", - "b1699" - ], - [ - "gene_synonym", - "JW1689" - ] - ], - "dna_sequence": "ATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGTTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGATGTAAAAACATGACCGGCGGGCGTCTTTATGCCCACACACTTGAAGCAATCATTCCAGGCTTTGCAGTATCAGCGCCGGTAGAACGCAAGGTCACACGCGAGAAAATCTCCTTCTTAACCGAAGAAAGCGCCGTTACCCTCGATTTTCACCGCGAGCAGCCAGATGTTCCGCAACACGCATCTTATACCGTATTGCGTAATCGTCTGGACCCGTGGTTGATGGAACAAGCCGAGCAGGCGGGCGCGCAGTTTATCCCAGGCGTTCGCGTCGACGCGCTGGTTCGTGAAGGAAACAAGGTCACTGGCGTGCAGGCTGGGGATGATATTCTCGAAGCGAATGTGGTGATTCTGGCTGATGGCGTTAACTCGATGCTTGGCCGCTCGCTGGGAATGGTTCCCGCTTCCGATCCGCATCATTACGCTGTTGGTGTTAAAGAGGTTATTGGCCTCACACCAGAACAGATCAACGATCGCTTTAATATTACGGGCGAGGAAGGTGCCGCCTGGCTGTTTGCCGGTTCCCCTTCTGACGGCCTGATGGGCGGGGGATTTCTCTATACCAACAAGGATTCCATATCCTTGGGGCTGGTTTGTGGATTGGGTGATATCGCCCATGCGCAAAAAAGCGTGCCGCAAATGCTGGAAGATTTTAAACAACACCCCGCCATTCGCCCGCTGATTAGCGGCGGCAAACTGCTTGAATATTCCGCGCATATGGTGCCGGAAGGCGGTCTGGCAATGGTGCCGCAACTGGTTAACGAGGGCGTGATGATCGTTGGTGACGCCGCAGGCTTCTGCCTGAATTTGGGTTTTACGGTCCGCGGCATGGATTTAGCCATTGCATCGGCTCAGGCTGCCGCCACAACGGTGATCGCCGCCAAAGAACGCGCGGATTTCTCCGCCAGCAGTCTGGCGCAATACAAACGTGAGCTGGAACAAAGCTGCGTCATGCGTGATATGCAGCATTTTCGCAAGATCCCGGCGCTGATGGAAAACCCGCGCCTGTTTAGCCAATACCCACGAATGGTAGCCGACATCATGAACGAGATGTTCACCATCGACGGCAAACCAAACCAGCCGGTACGAAAAATGATCATGGGACATGCGAAGAAAATTGGGCTGATCAACTTGCTGAAAGATGGCATTAAGGGAGCAACCGCGCTATGA", - "dna_sequence_length": 1290, - "functions": [ - "putative oxidoreductase" - ], - "id": "CDS_1688", - "location": [ - [ - "NC_000913", - 1781395, - "+", - 1290 - ] - ], - "md5": "df670b9b83a40c35d57fe68b28fdd467", - "parent_gene": "", - "protein_md5": "46bf11d88c09549eeb465a498abb02b9", - "protein_translation": "MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNQPVRKMIMGHAKKIGLINLLKDGIKGATAL", - "protein_translation_length": 429, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1698" - ], - [ - "gene_synonym", - "GeneID:946214" - ], - [ - "gene_synonym", - "ASAP:ABE-0005674" - ], - [ - "gene_synonym", - "GI:16129656" - ], - [ - "gene_synonym", - "b1700" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77714" - ], - [ - "gene_synonym", - "EcoGene:EG13979" - ], - [ - "gene_synonym", - "JW1690" - ], - [ - "gene_synonym", - "NP_416215.1" - ], - [ - "gene_synonym", - "ydiT" - ] - ], - "dna_sequence": "ATGAGCCAGAACGCTACGGTTAACGTCGACATCAAATTAGGCGTCAATAAATTCCATGTTGATGAGGGCCACCCGCATATCATTCTGGCGGAAAATCCCGATATCAATGAATTCCATAAATTAATGAAAGCCTGCCCTGCCGGACTTTATAAGCAGGATGACGCAGGAAACATTCATTTTGATTCCGCCGGTTGTCTGGAGTGCGGCACCTGTCGGGTGCTGTGCGGTAACACTATTCTCGAACAGTGGCAATATCCCGCAGGCACCTTCGGTATTGATTTTCGCTACGGCTAA", - "dna_sequence_length": 294, - "functions": [ - "putative 3Fe-4S ferredoxin-type protein" - ], - "id": "CDS_1689", - "location": [ - [ - "NC_000913", - 1782681, - "+", - 294 - ] - ], - "md5": "f5d538a0813e00b2c58c633e7cd15932", - "parent_gene": "", - "protein_md5": "41572006de550b3469e04933f37ec499", - "protein_translation": "MSQNATVNVDIKLGVNKFHVDEGHPHIILAENPDINEFHKLMKACPAGLYKQDDAGNIHFDSAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG", - "protein_translation_length": 97, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1699" - ], - [ - "gene_synonym", - "GeneID:946213" - ], - [ - "gene_synonym", - "ASAP:ABE-0005676" - ], - [ - "gene_synonym", - "b1701" - ], - [ - "gene_synonym", - "ydiD" - ], - [ - "gene_synonym", - "EcoGene:EG12357" - ], - [ - "gene_synonym", - "JW5910" - ], - [ - "gene_synonym", - "NP_416216.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38135" - ], - [ - "gene_synonym", - "GI:145698273" - ], - [ - "gene_synonym", - "fadK" - ] - ], - "dna_sequence": "ATGAAAGTGACATTAACGTTTAACGAACAACGTCGTGCGGCGTATCGTCAGCAAGGGTTATGGGGCGATGCTTCGCTGGCCGATTACTGGCAGCAGACCGCTCGTGCGATGCCAGACAAAATTGCCGTGGTCGATAATCATGGTGCATCGTACACCTATAGCGCGCTCGATCACGCCGCGAGCTGTCTGGCAAACTGGATGTTAGCGAAGGGTATTGAATCAGGCGATCGCATCGCATTTCAACTGCCTGGCTGGTGTGAATTTACCGTTATCTATCTTGCCTGCCTGAAAATCGGTGCAGTTTCCGTGCCGCTGTTGCCTTCCTGGCGGGAAGCAGAACTGGTGTGGGTGCTCAATAAGTGTCAGGCAAAAATGTTCTTTGCACCGACGTTGTTTAAACAAACGCGTCCGGTAGATTTAATCCTGCCGCTGCAAAATCAGCTTCCACAACTACAACAAATTGTCGGCGTGGACAAACTGGCTCCCGCCACCTCTTCCCTCTCATTAAGTCAGATTATCGCCGACAATACCTCACTGACCACGGCGATAACGACCCACGGCGATGAATTAGCTGCGGTGCTGTTTACCTCCGGAACCGAGGGTCTGCCAAAGGGCGTGATGCTAACGCATAACAATATTCTCGCCAGTGAGCGGGCTTATTGCGCGCGACTGAATCTGACCTGGCAGGATGTCTTTATGATGCCTGCGCCACTTGGTCACGCAACGGGCTTTCTGCATGGCGTAACGGCACCATTCTTAATTGGCGCTCGCAGCGTGTTGTTAGATATTTTCACTCCTGATGCGTGTCTCGCGCTGCTTGAGCAGCAGCGTTGCACCTGTATGCTCGGCGCAACGCCGTTTGTCTATGATCTTTTGAATGTACTAGAGAAACAACCCGCGGACCTTTCAGCGCTGCGTTTCTTTCTTTGCGGCGGAACCACAATCCCCAAAAAAGTGGCGCGTGAATGCCAGCAGCGCGGCATTAAATTATTAAGTGTTTATGGTTCCACAGAAAGTTCGCCGCATGCGGTGGTGAATCTCGATGATCCTTTGTCGCGCTTTATGCACACCGATGGTTACGCTGCCGCAGGTGTAGAGATTAAAGTGGTCGATGACGCACGCAAGACCTTACCGCCAGGTTGCGAAGGTGAAGAAGCCTCGCGTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGATCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAATATTAGCAGCCGTGAAGTGGAAGATATTTTATTGCAGCATCCTAAAATTCACGATGCCTGTGTGGTTGCAATGTCCGATGAACGTTTAGGTGAACGATCATGCGCTTATGTCGTGCTGAAAGCGCCGCATCATTCATTATCGCTGGAAGAGGTAGTGGCTTTTTTTAGCCGTAAACGGGTCGCAAAATATAAATATCCTGAACATATCGTGGTAATCGAAAAACTACCGCGAACTACCTCAGGTAAAATACAAAAGTTTTTGTTAAGAAAAGATATTATGCGGCGTTTAACGCAGGATGTCTGTGAAGAGATTGAATAA", - "dna_sequence_length": 1647, - "functions": [ - "short chain acyl-CoA synthetase, anaerobic" - ], - "id": "CDS_1690", - "location": [ - [ - "NC_000913", - 1783031, - "+", - 1647 - ] - ], - "md5": "9b0025865c3f89bf937e831f2a90c2eb", - "parent_gene": "", - "protein_md5": "b934c01baf11e5405e05925f65e6dc4d", - "protein_translation": "MKVTLTFNEQRRAAYRQQGLWGDASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASCLANWMLAKGIESGDRIAFQLPGWCEFTVIYLACLKIGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADNTSLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFVYDLLNVLEKQPADLSALRFFLCGGTTIPKKVARECQQRGIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDDARKTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMSDERLGERSCAYVVLKAPHHSLSLEEVVAFFSRKRVAKYKYPEHIVVIEKLPRTTSGKIQKFLLRKDIMRRLTQDVCEEIE", - "protein_translation_length": 548, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10759" - ], - [ - "gene_synonym", - "b1702" - ], - [ - "gene_synonym", - "NP_416217.1" - ], - [ - "gene_synonym", - "ppsA" - ], - [ - "gene_synonym", - "GI:16129658" - ], - [ - "gene_synonym", - "pps" - ], - [ - "gene_synonym", - "ASAP:ABE-0005678" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23538" - ], - [ - "gene_synonym", - "GeneID:946209" - ], - [ - "gene_synonym", - "JW1692" - ], - [ - "gene_synonym", - "ECK1700" - ] - ], - "dna_sequence": "ATGTCCAACAATGGCTCGTCACCGCTGGTGCTTTGGTATAACCAACTCGGCATGAATGATGTAGACAGGGTTGGGGGCAAAAATGCCTCCCTGGGTGAAATGATTACTAATCTTTCCGGAATGGGTGTTTCCGTTCCGAATGGTTTCGCCACAACCGCCGACGCGTTTAACCAGTTTCTGGACCAAAGCGGCGTAAACCAGCGCATTTATGAACTGCTGGATAAAACGGATATTGACGATGTTACTCAGCTTGCGAAAGCGGGCGCGCAAATCCGCCAGTGGATTATCGACACTCCCTTCCAGCCTGAGCTGGAAAACGCCATCCGCGAAGCCTATGCACAGCTTTCCGCCGATGACGAAAACGCCTCTTTTGCGGTGCGCTCCTCCGCCACCGCAGAAGATATGCCGGACGCTTCTTTTGCCGGTCAGCAGGAAACCTTCCTCAACGTTCAGGGTTTTGACGCCGTTCTCGTGGCAGTGAAACATGTATTTGCTTCTCTGTTTAACGATCGCGCCATCTCTTATCGTGTGCACCAGGGTTACGATCACCGTGGTGTGGCGCTCTCCGCCGGTGTTCAACGGATGGTGCGCTCTGACCTCGCATCATCTGGCGTGATGTTCTCCATTGATACCGAATCCGGCTTTGACCAGGTGGTGTTTATCACTTCCGCATGGGGCCTTGGTGAGATGGTCGTGCAGGGTGCGGTTAACCCGGATGAGTTTTACGTGCATAAACCGACACTGGCGGCGAATCGCCCGGCTATCGTGCGCCGCACCATGGGGTCGAAAAAAATCCGCATGGTTTACGCGCCGACCCAGGAGCACGGCAAGCAGGTTAAAATCGAAGACGTACCGCAGGAACAGCGTGACATCTTCTCGCTGACCAACGAAGAAGTGCAGGAACTGGCAAAACAGGCCGTACAAATTGAGAAACACTACGGTCGCCCGATGGATATTGAGTGGGCGAAAGATGGCCACACCGGTAAACTGTTCATTGTGCAGGCGCGTCCGGAAACCGTGCGCTCACGCGGTCAGGTCATGGAGCGTTATACGCTGCATTCACAGGGTAAGATTATCGCCGAAGGCCGTGCTATCGGTCATCGCATCGGTGCGGGTCCGGTGAAAGTCATCCATGACATCAGCGAAATGAACCGCATCGAACCTGGCGACGTGCTGGTTACTGACATGACCGACCCGGACTGGGAACCGATCATGAAGAAAGCATCTGCCATCGTCACCAACCGTGGCGGTCGTACCTGTCACGCGGCGATCATCGCTCGTGAACTGGGCATTCCGGCGGTAGTGGGCTGTGGAGATGCAACAGAACGGATGAAAGACGGTGAGAACGTCACTGTTTCTTGTGCCGAAGGTGATACCGGTTACGTCTATGCGGAGTTGCTGGAATTTAGCGTGAAAAGCTCCAGCGTAGAAACGATGCCGGATCTGCCGTTGAAAGTGATGATGAACGTCGGTAACCCGGACCGTGCTTTCGACTTCGCCTGCCTACCGAACGAAGGCGTGGGCCTTGCGCGTCTGGAATTTATCATCAACCGTATGATTGGCGTCCACCCACGCGCACTGCTTGAGTTTGACGATCAGGAACCGCAGTTGCAAAACGAAATCCGCGAGATGATGAAAGGTTTTGATTCTCCGCGTGAATTTTACGTTGGTCGTCTGACTGAAGGGATCGCGACGCTGGGTGCCGCGTTTTATCCGAAGCGCGTCATTGTCCGTCTCTCTGATTTTAAATCGAACGAATATGCCAACCTGGTCGGTGGTGAGCGTTACGAGCCAGATGAAGAGAACCCGATGCTCGGCTTCCGTGGCGCGGGCCGCTATGTTTCCGACAGCTTCCGCGACTGTTTCGCGCTGGAGTGTGAAGCAGTGAAACGTGTGCGCAACGACATGGGACTGACCAACGTTGAGATCATGATCCCGTTCGTGCGTACCGTAGATCAGGCGAAAGCGGTGGTTGAAGAACTGGCGCGTCAGGGGCTGAAACGTGGCGAGAACGGGCTGAAAATCATCATGATGTGTGAAATCCCGTCCAACGCCTTGCTGGCCGAGCAGTTCCTCGAATATTTCGACGGCTTCTCAATTGGCTCAAACGATATGACGCAGCTGGCGCTCGGTCTGGACCGTGACTCCGGCGTGGTGTCTGAATTGTTCGATGAGCGCAACGATGCGGTGAAAGCACTGCTGTCGATGGCTATCCGTGCCGCGAAGAAACAGGGCAAATATGTCGGGATTTGCGGTCAGGGTCCGTCCGACCACGAAGACTTTGCCGCATGGTTGATGGAAGAGGGGATCGATAGCCTGTCTCTGAACCCGGACACCGTGGTGCAAACCTGGTTAAGCCTGGCTGAACTGAAGAAATAA", - "dna_sequence_length": 2379, - "functions": [ - "phosphoenolpyruvate synthase" - ], - "id": "CDS_1691", - "location": [ - [ - "NC_000913", - 1787112, - "-", - 2379 - ] - ], - "md5": "4a02ef73d8be1337536ba783acb21ee6", - "parent_gene": "", - "protein_md5": "8d98038c6dec8415d1e126fe011fc089", - "protein_translation": "MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVSVPNGFATTADAFNQFLDQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQPELENAIREAYAQLSADDENASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAVKHVFASLFNDRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQVVFITSAWGLGEMVVQGAVNPDEFYVHKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHGKQVKIEDVPQEQRDIFSLTNEEVQELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQARPETVRSRGQVMERYTLHSQGKIIAEGRAIGHRIGAGPVKVIHDISEMNRIEPGDVLVTDMTDPDWEPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERMKDGENVTVSCAEGDTGYVYAELLEFSVKSSSVETMPDLPLKVMMNVGNPDRAFDFACLPNEGVGLARLEFIINRMIGVHPRALLEFDDQEPQLQNEIREMMKGFDSPREFYVGRLTEGIATLGAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDEENPMLGFRGAGRYVSDSFRDCFALECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIPSNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVSELFDERNDAVKALLSMAIRAAKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTVVQTWLSLAELKK", - "protein_translation_length": 792, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1703" - ], - [ - "gene_synonym", - "GeneID:946207" - ], - [ - "gene_synonym", - "ydiA" - ], - [ - "gene_synonym", - "GI:16129659" - ], - [ - "gene_synonym", - "duf299" - ], - [ - "gene_synonym", - "ppsR" - ], - [ - "gene_synonym", - "EcoGene:EG11132" - ], - [ - "gene_synonym", - "JW1693" - ], - [ - "gene_synonym", - "ASAP:ABE-0005682" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8A4" - ], - [ - "gene_synonym", - "NP_416218.1" - ], - [ - "gene_synonym", - "ECK1701" - ] - ], - "dna_sequence": "ATGGATAATGCTGTTGATCGCCACGTTTTTTATATTTCTGATGGTACGGCAATAACTGCGGAGGTATTAGGACACGCAGTAATGTCACAATTTCCCGTCACTATCAGCAGCATCACGCTGCCGTTTGTCGAAAATGAGAGCCGTGCACGGGCAGTGAAGGATCAGATTGACGCAATTTATCACCAGACAGGCGTGCGCCCGCTGGTCTTCTACTCCATCGTGTTGCCGGAGATTCGCGCCATCATCTTGCAAAGTGAAGGCTTTTGCCAGGATATCGTTCAGGCGCTGGTTGCCCCGCTACAACAAGAGATGAAACTGGATCCAACGCCGATTGCTCATCGTACCCATGGCCTTAACCCTAATAATCTCAATAAATATGATGCGCGCATTGCGGCGATTGATTACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGCAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGACTATCGACCCGGAACGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTTAGTCGCCGAATGTACTAG", - "dna_sequence_length": 834, - "functions": [ - "PEP synthase kinase and PEP synthase pyrophosphorylase" - ], - "id": "CDS_1692", - "location": [ - [ - "NC_000913", - 1787445, - "+", - 834 - ] - ], - "md5": "2842c2b9af85aba08284ac44354d8d88", - "parent_gene": "", - "protein_md5": "06fae8bc6a882323282c58129bdf9b9e", - "protein_translation": "MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQEMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSRCGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIREERRENSRYASLRQCRMEVAEVEALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRMY", - "protein_translation_length": 277, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1704" - ], - [ - "gene_synonym", - "ASAP:ABE-0005686" - ], - [ - "gene_synonym", - "EcoGene:EG10080" - ], - [ - "gene_synonym", - "JW1694" - ], - [ - "gene_synonym", - "GeneID:946229" - ], - [ - "gene_synonym", - "ECK1702" - ], - [ - "gene_synonym", - "aroH" - ], - [ - "gene_synonym", - "GI:16129660" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00887" - ], - [ - "gene_synonym", - "NP_416219.1" - ] - ], - "dna_sequence": "ATGAACAGAACTGACGAACTCCGTACTGCGCGTATTGAGAGCCTGGTAACGCCCGCCGAACTCGCGCTACGGTATCCCGTAACGCCTGGCGTCGCCACCCATGTCACCGACTCCCGCCGCAGAATTGAAAAAATACTGAATGGTGAAGATAAGCGACTGTTGGTCATTATTGGCCCCTGCTCGATCCACGATCTCACCGCTGCAATGGAGTACGCCACCCGTCTGCAGTCGCTGCGCAACCAGTACCAGTCACGGCTGGAAATCGTAATGCGCACCTATTTTGAAAAACCACGAACTGTTGTCGGCTGGAAAGGACTAATCTCCGATCCAGATTTAAACGGCAGCTATCGGGTAAATCACGGTCTGGAGCTGGCGCGCAAATTACTTTTACAGGTAAATGAGCTGGGCGTCCCAACCGCGACCGAGTTCCTCGATATGGTGACCGGTCAGTTTATTGCTGATTTAATCAGTTGGGGCGCGATTGGCGCACGTACTACCGAAAGTCAGATCCACCGCGAAATGGCTTCGGCACTCTCCTGTCCGGTAGGTTTTAAAAATGGTACCGATGGCAATACGCGGATTGCTGTGGATGCTATCCGCGCAGCCCGCGCCAGCCATATGTTCCTCTCGCCAGACAAAAATGGTCAGATGACCATCTATCAGACCAGCGGCAACCCGTATGGCCACATTATTATGCGTGGCGGCAAAAAACCGAATTATCATGCCGATGATATCGCCGCAGCCTGCGATACGCTGCACGAGTTTGATTTACCTGAACATCTGGTGGTGGATTTCAGCCACGGTAACTGCCAGAAGCAGCACCGTCGCCAGTTAGAAGTTTGTGAGGATATTTGTCAGCAAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTTCTGA", - "dna_sequence_length": 1047, - "functions": [ - "3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible" - ], - "id": "CDS_1693", - "location": [ - [ - "NC_000913", - 1788435, - "+", - 1047 - ] - ], - "md5": "38bc7f6ec3f719553b36af477f71b01c", - "parent_gene": "", - "protein_md5": "166e04931ad678bcd8588b541710f9c1", - "protein_translation": "MNRTDELRTARIESLVTPAELALRYPVTPGVATHVTDSRRRIEKILNGEDKRLLVIIGPCSIHDLTAAMEYATRLQSLRNQYQSRLEIVMRTYFEKPRTVVGWKGLISDPDLNGSYRVNHGLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGAIGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRAARASHMFLSPDKNGQMTIYQTSGNPYGHIIMRGGKKPNYHADDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRRQLEVCEDICQQIRNGSTAIAGIMAESFLREGTQKIVGSQPLTYGQSITDPCLGWEDTERLVEKLASAVDTRF", - "protein_translation_length": 348, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416220.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACX9" - ], - [ - "gene_synonym", - "b1705" - ], - [ - "gene_synonym", - "GeneID:946205" - ], - [ - "gene_synonym", - "ASAP:ABE-0005692" - ], - [ - "gene_synonym", - "EcoGene:EG12391" - ], - [ - "gene_synonym", - "ydiE" - ], - [ - "gene_synonym", - "JW1695" - ], - [ - "gene_synonym", - "GI:16129661" - ], - [ - "gene_synonym", - "ECK1703" - ] - ], - "dna_sequence": "ATGCGTTATACGGATAGCAGAAAACTCACGCCTGAAACGGATGCCAATCACAAGACCGCTTCCCCGCAGCCTATTCGGCGAATTTCCAGCCAGACACTGTTAGGTCCGGATGGCAAACTGATTATCGATCATGACGGGCAAGAATATCTGCTCCGTAAAACTCAGGCTGGCAAGCTGCTGTTGACCAAGTAG", - "dna_sequence_length": 192, - "functions": [ - "hemin uptake protein HemP homolog" - ], - "id": "CDS_1694", - "location": [ - [ - "NC_000913", - 1789613, - "+", - 192 - ] - ], - "md5": "d8e12559c6ee29ff7e7bb20863e73050", - "parent_gene": "", - "protein_md5": "2aa1c4c849cfdcc5e424b888b95747ca", - "protein_translation": "MRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK", - "protein_translation_length": 63, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1706" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77649" - ], - [ - "gene_synonym", - "ASAP:ABE-0005694" - ], - [ - "gene_synonym", - "NP_416221.1" - ], - [ - "gene_synonym", - "GI:16129662" - ], - [ - "gene_synonym", - "JW1696" - ], - [ - "gene_synonym", - "EcoGene:EG13980" - ], - [ - "gene_synonym", - "GeneID:946219" - ], - [ - "gene_synonym", - "ECK1704" - ], - [ - "gene_synonym", - "ydiU" - ] - ], - "dna_sequence": "ATGACCCTGTCTTTTGTTACCCGCTGGCGCGATGAATTGCCAGAAACCTATACAGCACTTTCCCCTACGCCTTTAAATAATGCCCGGCTGATTTGGCATAATACCGAACTGGCTAACACGCTGAGTATTCCATCGTCGCTGTTTAAAAATGGCGCAGGTGTCTGGGGCGGCGAAGCCCTACTGCCTGGTATGTCACCACTGGCGCAGGTTTACAGTGGTCATCAGTTCGGCGTCTGGGCGGGCCAACTGGGTGATGGGCGCGGCATTTTACTCGGCGAACAACTGCTTGCTGATGGCACTACAATGGACTGGCATCTGAAAGGTGCTGGCCTGACGCCTTATTCGCGAATGGGTGATGGACGGGCGGTTTTACGTTCGACGATACGAGAAAGTCTCGCCAGTGAGGCGATGCATTATCTGGGCATTCCGACGACCCGCGCGTTAAGTATCGTCACCAGCGATTCGCCAGTGTATCGGGAAACGGCGGAGCCAGGCGCGATGCTGATGCGTGTGGCACCAAGTCATCTGCGCTTTGGTCATTTCGAACATTTTTACTACCGCCGCGAGTCGGAAAAGGTTCGTCAGTTAGCTGACTTTGCTATTCGTCATTACTGGTCACATCTTGCAGATGATGAGGACAAATACCGTCTCTGGTTTAGCGATGTTGTCGCACGTACCGCGTCGTTAATTGCCCAATGGCAGACGGTCGGCTTTGCTCATGGGGTGATGAATACCGACAACATGTCGCTGCTGGGGCTGACGCTTGATTACGGGCCGTTTGGTTTTCTTGATGATTACGAACCCGGTTTTATTTGTAATCACTCGGATCATCAAGGGCGTTACAGCTTTGATAATCAACCTGCCGTCGCGTTGTGGAATTTACAGCGTCTGGCGCAGACATTGTCGCCATTTGTTGCCGTAGATGCCCTGAATGAGGCCCTGGACAGCTATCAGCAGGTTTTGTTGACGCATTATGGAGAACGGATGCGGCAGAAACTGGGCTTCATGACGGAGCAAAAAGAGGATAACGCGCTACTGAATGAATTATTCAGTCTGATGGCGCGAGAGCGCAGCGATTATACCCGCACATTCCGCATGCTGAGTCTGACCGAGCAGCACAGCGCGGCGTCACCGCTACGTGATGAGTTTATTGATCGTGCGGCATTTGATGACTGGTTTGCCCGTTATCGGGGGCGTTTGCAACAAGACGAGGTTAGCGATAGTGAGCGTCAGCAACTGATGCAAAGCGTTAACCCCGCTCTGGTATTGCGCAACTGGTTGGCGCAACGGGCGATTGAAGCGGCAGAAAAGGGTGATATGACGGAATTGCACCGCCTGCATGAGGCGTTGCGAAATCCTTTCAGCGACAGAGATGATGACTATGTCAGTCGTCCACCTGACTGGGGTAAACGGCTGGAAGTCAGCTGCTCGAGTTAA", - "dna_sequence_length": 1437, - "functions": [ - "UPF0061 family protein" - ], - "id": "CDS_1695", - "location": [ - [ - "NC_000913", - 1791244, - "-", - 1437 - ] - ], - "md5": "83fe5a363e801aad3921b088c78c29f3", - "parent_gene": "", - "protein_md5": "87fe9c37d27203e2cb7cd1e70ecf09b8", - "protein_translation": "MTLSFVTRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNGAGVWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETAEPGAMLMRVAPSHLRFGHFEHFYYRRESEKVRQLADFAIRHYWSHLADDEDKYRLWFSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSDHQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQVLLTHYGERMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS", - "protein_translation_length": 478, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1707" - ], - [ - "gene_synonym", - "GeneID:946217" - ], - [ - "gene_synonym", - "ASAP:ABE-0005696" - ], - [ - "gene_synonym", - "NP_416222.1" - ], - [ - "gene_synonym", - "JW1697" - ], - [ - "gene_synonym", - "EcoGene:EG13981" - ], - [ - "gene_synonym", - "cdgR" - ], - [ - "gene_synonym", - "GI:16129663" - ], - [ - "gene_synonym", - "ECK1705" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76204" - ], - [ - "gene_synonym", - "ydiV" - ] - ], - "dna_sequence": "ATGAAGATTTTTTTGGAGAATCTTTATCATTCTGATTGCTATTTCCTGCCGATAAGAGACAACCAGCAAGTCCTTGTCGGCGTTGAGTTAATTACCCATTTCTCCAGTGAAGATGGTACGGTTCGTATCCCGACGAGTCGGGTTATAGCGCAACTTACCGAGGAGCAACATTGGCAATTATTTTCAGAGCAGTTGGAATTACTAAAATCATGCCAACATTTTTTTATTCAACATAAACTCTTTGCCTGGCTTAATTTAACGCCACAAGTGGCTACATTATTATTAGAGAGGGATAATTACGCAGGCGAACTATTAAAATATCCGTTTATTGAACTGTTGATTAATGAGAATTACCCGCATCTCAATGAAGGAAAAGATAATCGCGGTCTTTTATCCTTATCGCAAGTGTATCCCCTTGTGTTAGGTAATTTGGGAGCAGGCAATAGCACAATGAAAGCGGTTTTTGATGGTCTTTTCACCCGCGTCATGCTGGATAAAAGTTTTATTCAGCAACAAATCACGCACCGCTCCTTCGAACCGTTTATTCGTGCGATCCAGGCGCAAATTTCCCCTTGTTGCAATTGCATCATTGCGGGAGGCATTGATACGGCAGAAATATTGGCACAGATTACCCCCTTCGATTTCCATGCTCTCCAGGGATGCCTGTGGCCTGCCGTTCCCATAAATCAGATAACGACGTTGGTTCAGCGATAA", - "dna_sequence_length": 714, - "functions": [ - "anti-FlhD4C2 factor, inactive EAL family phosphodiesterase" - ], - "id": "CDS_1696", - "location": [ - [ - "NC_000913", - 1792020, - "-", - 714 - ] - ], - "md5": "0a28476b5de5063edd12ba48c7937932", - "parent_gene": "", - "protein_md5": "860d8e0cdff77015555cd50fec1428bd", - "protein_translation": "MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHALQGCLWPAVPINQITTLVQR", - "protein_translation_length": 237, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "nlpC" - ], - [ - "gene_synonym", - "ASAP:ABE-0005704" - ], - [ - "gene_synonym", - "GeneID:946220" - ], - [ - "gene_synonym", - "JW1698" - ], - [ - "gene_synonym", - "EcoGene:EG11133" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23898" - ], - [ - "gene_synonym", - "ECK1706" - ], - [ - "gene_synonym", - "b1708" - ], - [ - "gene_synonym", - "NP_416223.1" - ], - [ - "gene_synonym", - "GI:16129664" - ] - ], - "dna_sequence": "ATGCGTTTCTGCCTTATTTTGATCACAGCACTGCTTCTGGCCGGGTGTAGCCACCATAAAGCACCGCCGCCAAATGCCAGACTTTCTGATTCGATTACCGTTATTGCCGGTTTGAACGACCAGCTACAAAGCTGGCATGGCACGCCGTATCGTTATGGTGGCATGACGCGGCGCGGTGTGGACTGTTCGGGATTTGTGGTTGTGACGATGCGCGATCGTTTCGATTTGCAGCTGCCCCGTGAAACCAAACAACAAGCCTCTATTGGCACGCAAATTGATAAAGACGAGTTGCTGCCAGGTGACCTGGTCTTTTTCAAAACGGGGTCCGGACAAAATGGTTTGCATGTAGGTATTTACGATACCAACAACCAATTTATCCACGCCTCTACCAGCAAGGGAGTGATGCGTTCCTCACTTGATAATGTCTATTGGCAGAAAAATTTCTGGCAGGCGAGACGAATCTAG", - "dna_sequence_length": 465, - "functions": [ - "putative C40 clan peptidase lipoprotein" - ], - "id": "CDS_1697", - "location": [ - [ - "NC_000913", - 1792731, - "-", - 465 - ] - ], - "md5": "f72c6344179294b1fc2950679e771f40", - "parent_gene": "", - "protein_md5": "ea4b04bdc62b56c09e81cdb9ca63bfd8", - "protein_translation": "MRFCLILITALLLAGCSHHKAPPPNARLSDSITVIAGLNDQLQSWHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDELLPGDLVFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI", - "protein_translation_length": 154, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06611" - ], - [ - "gene_synonym", - "btuD" - ], - [ - "gene_synonym", - "GeneID:945751" - ], - [ - "gene_synonym", - "ASAP:ABE-0005707" - ], - [ - "gene_synonym", - "NP_416224.1" - ], - [ - "gene_synonym", - "EcoGene:EG10128" - ], - [ - "gene_synonym", - "b1709" - ], - [ - "gene_synonym", - "ECK1707" - ], - [ - "gene_synonym", - "JW1699" - ], - [ - "gene_synonym", - "GI:16129665" - ] - ], - "dna_sequence": "ATGTCTATTGTGATGCAGTTACAAGATGTTGCGGAATCTACCCGCCTGGGGCCGCTTTCTGGCGAGGTTCGGGCTGGGGAGATCCTGCACCTGGTGGGGCCGAATGGCGCGGGTAAGAGTACCTTACTGGCGCGAATGGCCGGAATGACCAGCGGTAAGGGAAGCATTCAGTTCGCGGGGCAACCACTGGAAGCATGGTCCGCAACAAAACTCGCGCTGCATCGCGCCTATCTTTCACAACAGCAGACGCCGCCGTTTGCAACGCCGGTCTGGCACTACCTGACACTGCATCAGCACGATAAAACGCGTACCGAACTACTGAATGATGTCGCAGGGGCGCTGGCTCTTGATGACAAACTCGGACGTAGCACCAATCAACTTTCCGGCGGTGAATGGCAACGCGTACGTCTTGCTGCGGTGGTGTTGCAAATCACACCACAAGCCAATCCCGCAGGCCAATTGCTGCTTCTTGATGAGCCGATGAACAGTCTTGATGTTGCGCAACAAAGTGCGTTAGACAAAATTCTGAGCGCGCTGTGTCAGCAAGGACTGGCGATTGTGATGAGCAGTCACGATCTCAACCACACATTGCGTCATGCGCATCGGGCGTGGTTGCTAAAAGGTGGAAAAATGCTGGCCAGTGGACGCAGGGAAGAGGTGCTCACGCCGCCAAATCTGGCGCAGGCCTATGGGATGAATTTTCGCCGTCTGGATATCGAAGGTCACAGAATGCTGATTTCGACCATCTGA", - "dna_sequence_length": 750, - "functions": [ - "vitamin B12 ABC transporter ATPase" - ], - "id": "CDS_1698", - "location": [ - [ - "NC_000913", - 1793558, - "-", - 750 - ] - ], - "md5": "79ea7122f7f0aecb28e7fdbf4fbce74d", - "parent_gene": "", - "protein_md5": "3f891fd2fa175397656369a95e76a1a3", - "protein_translation": "MSIVMQLQDVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFATPVWHYLTLHQHDKTRTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRREEVLTPPNLAQAYGMNFRRLDIEGHRMLISTI", - "protein_translation_length": 249, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1710" - ], - [ - "gene_synonym", - "ASAP:ABE-0005709" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06610" - ], - [ - "gene_synonym", - "btuE" - ], - [ - "gene_synonym", - "NP_416225.1" - ], - [ - "gene_synonym", - "EcoGene:EG10129" - ], - [ - "gene_synonym", - "GeneID:945915" - ], - [ - "gene_synonym", - "ECK1708" - ], - [ - "gene_synonym", - "JW1700" - ], - [ - "gene_synonym", - "GI:16129666" - ] - ], - "dna_sequence": "ATGCAAGATTCCATTCTGACGACCGTAGTGAAAGATATCGACGGTGAAGTGACCACGCTGGAGAAGTTCGCCGGTAATGTGCTGTTGATTGTCAATGTCGCCTCAAAGTGTGGCTTAACGCCGCAATATGAGCAGTTGGAGAATATTCAGAAAGCCTGGGTCGATCGAGGTTTTATGGTGCTGGGATTCCCGTGCAACCAGTTTCTGGAACAAGAACCGGGCAGCGATGAAGAGATTAAAACTTACTGTACCACCACATGGGGGGTGACGTTCCCGATGTTCAGTAAGATTGAAGTTAATGGCGAAGGACGCCATCCGCTGTATCAAAAATTGATTGCCGCAGCGCCGACCGCAGTCGCGCCGGAAGAGAGCGGATTCTATGCCCGTATGGTCAGCAAAGGCCGTGCACCGCTGTACCCGGATGATATTTTATGGAATTTTGAAAAATTCCTGGTTGGCAGGGACGGAAAAGTCATCCAGCGTTTTTCCCCGGATATGACGCCGGAAGATCCCATTGTGATGGAAAGCATTAAACTGGCGTTGGCAAAATAA", - "dna_sequence_length": 552, - "functions": [ - "glutathione peroxidase" - ], - "id": "CDS_1699", - "location": [ - [ - "NC_000913", - 1794109, - "-", - 552 - ] - ], - "md5": "f946eb974b3317450caca6f0b9d8e399", - "parent_gene": "", - "protein_md5": "41f8e0c961670fdf341351b3b1031efe", - "protein_translation": "MQDSILTTVVKDIDGEVTTLEKFAGNVLLIVNVASKCGLTPQYEQLENIQKAWVDRGFMVLGFPCNQFLEQEPGSDEEIKTYCTTTWGVTFPMFSKIEVNGEGRHPLYQKLIAAAPTAVAPEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGKVIQRFSPDMTPEDPIVMESIKLALAK", - "protein_translation_length": 183, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10127" - ], - [ - "gene_synonym", - "b1711" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06609" - ], - [ - "gene_synonym", - "GeneID:945877" - ], - [ - "gene_synonym", - "ASAP:ABE-0005712" - ], - [ - "gene_synonym", - "btuC" - ], - [ - "gene_synonym", - "ECK1709" - ], - [ - "gene_synonym", - "JW1701" - ], - [ - "gene_synonym", - "NP_416226.1" - ], - [ - "gene_synonym", - "GI:16129667" - ] - ], - "dna_sequence": "ATGCTGACACTTGCCCGCCAACAACAGCGACAAAATATTCGCTGGTTATTATGCCTGTCAGTTTTGATGCTGCTGGCGCTTCTCTTAAGCCTTTGCGCCGGTGAACAATGGATCTCGCCAGGTGACTGGTTTACTCCTCGTGGCGAACTGTTCGTCTGGCAAATTCGCCTGCCACGTACGCTGGCTGTATTGCTGGTTGGTGCGGCGCTGGCTATATCCGGCGCTGTAATGCAGGCGTTGTTTGAAAATCCTCTGGCAGAACCTGGACTACTTGGCGTCTCTAACGGCGCAGGCGTGGGGCTTATCGCCGCGGTATTGCTTGGGCAAGGGCAACTCCCCAACTGGGCGCTAGGGCTGTGTGCGATTGCTGGCGCGCTTATCATCACTTTAATACTCTTACGTTTCGCCCGTCGTCATCTTTCGACCAGTCGGTTATTGCTGGCTGGCGTTGCATTAGGGATTATCTGTAGCGCACTAATGACGTGGGCTATCTACTTTTCCACCTCAGTTGATTTGCGTCAGCTGATGTACTGGATGATGGGCGGTTTTGGCGGCGTAGACTGGCGGCAAAGCTGGCTGATGCTGGCATTGATCCCCGTGTTGTTGTGGATCTGTTGTCAGTCCAGGCCGATGAATATGTTAGCACTTGGCGAGATCTCGGCGCGGCAACTGGGTTTACCCCTGTGGTTCTGGCGCAATGTGCTGGTGGCAGCGACCGGCTGGATGGTTGGCGTCAGTGTGGCGCTGGCGGGTGCTATCGGCTTTATTGGTCTGGTGATCCCCCATATTCTCCGGTTGTGTGGTTTAACCGATCATCGCGTATTACTTCCCGGCTGCGCGCTGGCAGGGGCGAGCGCATTGCTGCTGGCCGATATTGTAGCGCGCCTGGCATTAGCTGCCGCAGAGCTGCCTATTGGCGTGGTCACCGCAACGTTAGGTGCGCCGGTGTTTATCTGGTTATTGTTAAAAGCAGGACGTTAG", - "dna_sequence_length": 981, - "functions": [ - "vitamin B12 ABC transporter permease" - ], - "id": "CDS_1700", - "location": [ - [ - "NC_000913", - 1795152, - "-", - 981 - ] - ], - "md5": "b1167ebfe3947108bf4f0822f4a7ed43", - "parent_gene": "", - "protein_md5": "cc7473d584bb508c165ca41b53c0bea2", - "protein_translation": "MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISPGDWFTPRGELFVWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMTWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGEISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLLPGCALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKAGR", - "protein_translation_length": 326, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1712" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6X7" - ], - [ - "gene_synonym", - "GeneID:945472" - ], - [ - "gene_synonym", - "ASAP:ABE-0005715" - ], - [ - "gene_synonym", - "EcoGene:EG10440" - ], - [ - "gene_synonym", - "GI:16129668" - ], - [ - "gene_synonym", - "hid" - ], - [ - "gene_synonym", - "JW1702" - ], - [ - "gene_synonym", - "ihfA" - ], - [ - "gene_synonym", - "NP_416227.1" - ], - [ - "gene_synonym", - "ECK1710" - ], - [ - "gene_synonym", - "himA" - ] - ], - "dna_sequence": "ATGGCGCTTACAAAAGCTGAAATGTCAGAATATCTGTTTGATAAGCTTGGGCTTAGCAAGCGGGATGCCAAAGAACTGGTTGAACTGTTTTTCGAAGAGATCCGTCGCGCTCTGGAAAACGGCGAACAGGTGAAACTCTCTGGTTTTGGTAACTTCGATCTGCGTGATAAGAATCAACGCCCGGGACGTAACCCGAAAACGGGCGAGGATATTCCCATTACAGCACGGCGCGTGGTGACCTTCAGACCCGGGCAGAAGTTAAAAAGCCGGGTCGAAAACGCTTCGCCCAAAGACGAGTAA", - "dna_sequence_length": 300, - "functions": [ - "integration host factor (IHF), DNA-binding protein, alpha subunit" - ], - "id": "CDS_1701", - "location": [ - [ - "NC_000913", - 1795552, - "-", - 300 - ] - ], - "md5": "d1adbb93eaa91427c4edbe276bcec907", - "parent_gene": "", - "protein_md5": "59ec5d46b9f3ed5fc9297c10221bdeba", - "protein_translation": "MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE", - "protein_translation_length": 99, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1713" - ], - [ - "gene_synonym", - "ASAP:ABE-0005717" - ], - [ - "gene_synonym", - "NP_416228.1" - ], - [ - "gene_synonym", - "GI:16129669" - ], - [ - "gene_synonym", - "JW1703" - ], - [ - "gene_synonym", - "EcoGene:EG10710" - ], - [ - "gene_synonym", - "GeneID:945382" - ], - [ - "gene_synonym", - "pheT" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07395" - ], - [ - "gene_synonym", - "ECK1711" - ] - ], - "dna_sequence": "ATGAAATTCAGTGAACTGTGGTTACGCGAATGGGTGAACCCGGCGATTGATAGCGATGCGCTGGCAAATCAAATCACTATGGCGGGCCTGGAAGTTGACGGTGTAGAACCGGTTGCCGGCAGCTTCCACGGCGTGGTCGTTGGTGAAGTGGTTGAGTGTGCGCAGCATCCGAACGCTGACAAACTGCGTGTGACAAAAGTGAATGTCGGCGGCGATCGCCTGCTGGACATCGTCTGCGGTGCGCCAAACTGCCGTCAGGGCCTGCGTGTAGCGGTAGCGACCATTGGTGCTGTTCTGCCGGGTGATTTCAAAATTAAAGCGGCGAAACTGCGTGGCGAACCGTCTGAAGGGATGCTGTGCTCCTTCTCTGAACTGGGCATTTCTGACGATCACAGCGGCATTATCGAACTGCCTGCGGATGCGCCGATTGGCACCGATATCCGTGAATACCTGAAACTTGATGACAACACCATCGAAATCAGCGTGACGCCAAACCGTGCCGACTGCTTAGGCATCATTGGTGTTGCGCGTGACGTTGCCGTGCTGAACCAGCTGCCGCTGGTTCAACCGGAAATCGTTCCGGTTGGTGCGACCATCGACGACACGCTGCCGATTACAGTCGAAGCGCCGGAAGCCTGCCCGCGTTATCTTGGCCGTGTGGTAAAAGGCATTAACGTTAAAGCGCCAACTCCGCTGTGGATGAAAGAAAAACTGCGTCGTTGCGGGATCCGTTCTATCGATGCAGTTGTTGACGTCACCAACTATGTGCTGCTCGAACTGGGCCAGCCGATGCACGCTTTCGATAAAGATCGCATTGAAGGCGGCATTGTGGTGCGGATGGCGAAAGAGGGCGAAACGCTGGTGCTGCTCGACGGTACTGAAGCGAAGCTGAATGCTGACACTCTGGTCATCGCCGACCACAACAAGGCGCTGGCGATGGGCGGCATCTTCGGTGGCGAACACTCTGGCGTGAATGACGAAACACAAAACGTGCTGCTGGAATGCGCGTTCTTTAGCCCGCTGTCTATCACCGGTCGTGCTCGTCGTCATGGCCTGCATACCGATGCGTCTCACCGTTATGAGCGTGGCGTTGATCCGGCACTGCAGCACAAAGCGATGGAACGTGCGACCCGTCTGCTGATCGACATCTGCGGTGGTGAGGCTGGCCCGGTAATTGATATCACCAACGAAGCAACGCTGCCGAAGCGTGCAACCATCACTCTACGTCGTAGCAAACTGGATCGCCTGATCGGCCATCATATTGCGGATGAGCAGGTAACTGACATTCTGCGTCGTCTCGGCTGCGAAGTGACCGAAGGCAAAGACGAATGGCAGGCAGTTGCGCCGAGCTGGCGTTTCGATATGGAGATTGAAGAAGATCTGGTTGAAGAAGTCGCGCGTGTTTACGGCTACAACAACATCCCGGATGAGCCGGTACAGGCAAGCCTGATTATGGGTACTCACCGTGAAGCTGACCTGTCGCTCAAGCGCGTGAAAACGCTGCTCAACGACAAAGGCTATCAGGAAGTGATCACCTACAGCTTCGTTGATCCGAAAGTGCAGCAGATGATCCATCCAGGCGTTGAAGCCTTACTGCTGCCAAGCCCGATCTCTGTTGAAATGTCAGCAATGCGTCTTTCTCTGTGGACTGGCCTGCTGGCAACCGTGGTGTACAACCAGAACCGTCAGCAGAACCGTGTGCGCATTTTCGAAAGCGGTCTGCGTTTCGTACCAGATACTCAGGCACCGTTGGGCATTCGTCAGGATCTGATGTTAGCCGGTGTGATTTGCGGTAACCGTTACGAAGAGCACTGGAACCTGGCAAAAGAGACCGTTGATTTCTATGATTTGAAAGGCGATCTTGAATCCGTTCTCGACCTGACCGGTAAACTGAATGAGGTTGAGTTCCGTGCAGAAGCGAATCCGGCACTGCATCCGGGGCAATCCGCAGCGATTTATCTGAAAGGTGAACGTATTGGTTTTGTTGGGGTTGTTCATCCTGAACTGGAACGTAAACTGGATCTTAACGGTCGCACTCTGGTGTTCGAACTGGAGTGGAACAAGCTCGCAGACCGCGTGGTGCCTCAGGCGCGCGAGATTTCTCGCTTCCCGGCGAACCGTCGTGACATCGCGGTGGTGGTCGCAGAAAACGTTCCCGCAGCGGATATTTTATCCGAATGTAAGAAAGTTGGCGTAAATCAGGTAGTTGGCGTAAACTTATTTGACGTGTACCGCGGTAAGGGTGTTGCGGAGGGGTATAAGAGCCTCGCCATAAGCCTGATCCTGCAAGATACCAGCCGTACACTCGAAGAAGAGGAGATTGCCGCTACCGTCGCCAAATGTGTAGAGGCATTAAAAGAGCGATTCCAGGCATCATTGAGGGATTGA", 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"MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNADKLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLPGDFKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDVAVLNQLPLVQPEIVPVGATIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKLNADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDASHRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDEPVQASLIMGTHREADLSLKRVKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESVLDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIGFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAREISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLRD", - "protein_translation_length": 795, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005722" - ], - [ - "gene_synonym", - "b1714" - ], - [ - "gene_synonym", - "GI:16129670" - ], - [ - "gene_synonym", - "phe-act" - ], - [ - "gene_synonym", - "JW5277" - ], - [ - "gene_synonym", - "pheS" - ], - [ - "gene_synonym", - "GeneID:946223" - ], - [ - "gene_synonym", - "NP_416229.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08312" - ], - [ - "gene_synonym", - "ECK1712" - ], - [ - "gene_synonym", - "EcoGene:EG10709" - ] - ], - "dna_sequence": "ATGTCACATCTCGCAGAACTGGTTGCCAGTGCGAAGGCGGCCATTAGCCAGGCGTCAGATGTTGCCGCGTTAGATAATGTGCGCGTCGAATATTTGGGTAAAAAAGGGCACTTAACCCTTCAGATGACGACCCTGCGTGAGCTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCGCTGAATGCGCGTAAAGCGGAACTGGAAAGCGCTGCACTGAATGCGCGTCTGGCGGCGGAAACGATTGATGTCTCTCTGCCAGGTCGTCGCATTGAAAACGGCGGTCTGCATCCGGTTACCCGTACCATCGACCGTATCGAAAGTTTCTTCGGTGAGCTTGGCTTTACCGTGGCAACCGGGCCGGAAATCGAAGACGATTATCATAACTTCGATGCTCTGAACATTCCTGGTCACCACCCGGCGCGCGCTGACCACGACACTTTCTGGTTTGACACTACCCGCCTGCTGCGTACCCAGACCTCTGGCGTACAGATCCGCACCATGAAAGCCCAGCAGCCACCGATTCGTATCATCGCGCCTGGCCGTGTTTATCGTAACGACTACGACCAGACTCACACGCCGATGTTCCATCAGATGGAAGGTCTGATTGTTGATACCAACATCAGCTTTACCAACCTGAAAGGCACGCTGCACGACTTCCTGCGTAACTTCTTTGAGGAAGATTTGCAGATTCGCTTCCGTCCTTCCTACTTCCCGTTTACCGAACCTTCTGCAGAAGTGGACGTCATGGGTAAAAACGGTAAATGGCTGGAAGTGCTGGGCTGCGGGATGGTGCATCCGAACGTGTTGCGTAACGTTGGCATCGACCCGGAAGTTTACTCTGGTTTCGCCTTCGGGATGGGGATGGAGCGTCTGACTATGTTGCGTTACGGCGTCACCGACCTGCGTTCATTCTTCGAAAACGATCTGCGTTTCCTCAAACAGTTTAAATAA", - "dna_sequence_length": 984, - "functions": [ - "phenylalanine tRNA synthetase, alpha subunit" - ], - "id": "CDS_1703", - "location": [ - [ - "NC_000913", - 1798942, - "-", - 984 - ] - ], - "md5": "0d961e89611e223e0fc3541c37acee82", - "parent_gene": "", - "protein_md5": "2b152b67d38b3ef1e9de4703d23adf22", - "protein_translation": "MSHLAELVASAKAAISQASDVAALDNVRVEYLGKKGHLTLQMTTLRELPPEERPAAGAVINEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIENGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFDTTRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNISFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK", - "protein_translation_length": 327, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129671" - ], - [ - "gene_synonym", - "b1715" - ], - [ - "gene_synonym", - "ECK1713" - ], - [ - "gene_synonym", - "pheM" - ], - [ - "gene_synonym", - "JW1705" - ], - [ - "gene_synonym", - "ASAP:ABE-0005727" - ], - [ - "gene_synonym", - "GeneID:947212" - ], - [ - "gene_synonym", - "NP_416230.1" - ], - [ - "gene_synonym", - "EcoGene:EG11272" - ], - [ - "gene_synonym", - "phtL" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD74" - ] - ], - "dna_sequence": "ATGAATGCTGCTATTTTCCGCTTCTTTTTTTACTTTAGCACCTGA", - "dna_sequence_length": 45, - "functions": [ - "phenylalanyl-tRNA synthetase operon leader peptide" - ], - "id": "CDS_1704", - "location": [ - [ - "NC_000913", - 1799270, - "-", - 45 - ] - ], - "md5": "9992da08571b075a1363e6e4e153c058", - "parent_gene": "", - "protein_md5": "de85ed5420901d05b232eff5c72afac7", - "protein_translation": "MNAAIFRFFFYFST", - "protein_translation_length": 14, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005729" - ], - [ - "gene_synonym", - "b1716" - ], - [ - "gene_synonym", - "GI:16129672" - ], - [ - "gene_synonym", - "EcoGene:EG10881" - ], - [ - "gene_synonym", - "rplT" - ], - [ - "gene_synonym", - "JW1706" - ], - [ - "gene_synonym", - "GeneID:945152" - ], - [ - "gene_synonym", - "pdzA" - ], - [ - "gene_synonym", - "ECK1714" - ], - [ - "gene_synonym", - "NP_416231.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7L3" - ] - ], - "dna_sequence": "ATGGCTCGCGTAAAACGTGGTGTTATTGCACGTGCACGTCACAAGAAAATTTTGAAACAAGCTAAAGGCTACTACGGTGCGCGTTCTCGCGTATACCGCGTTGCCTTCCAGGCTGTTATCAAAGCTGGTCAGTATGCTTACCGTGACCGTCGTCAACGTAAGCGTCAGTTCCGTCAACTGTGGATTGCGCGTATCAACGCAGCAGCACGTCAGAACGGTATTTCTTACAGCAAATTCATCAATGGCCTGAAAAAAGCCTCTGTTGAAATCGACCGTAAGATCCTGGCTGATATCGCAGTATTCGACAAAGTAGCGTTCACCGCTCTGGTTGAAAAAGCGAAAGCAGCTCTGGCATAA", - "dna_sequence_length": 357, - "functions": [ - "50S ribosomal subunit protein L20" - ], - "id": "CDS_1705", - "location": [ - [ - "NC_000913", - 1799749, - "-", - 357 - ] - ], - "md5": "fdf8e4c632ecafc9bc6e5172f5aae1ea", - "parent_gene": "", - "protein_md5": "fde9fa85e2bb35caa2b2d6f368888a0a", - "protein_translation": "MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFDKVAFTALVEKAKAALA", - "protein_translation_length": 118, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1707" - ], - [ - "gene_synonym", - "EcoGene:EG11231" - ], - [ - "gene_synonym", - "b1717" - ], - [ - "gene_synonym", - "NP_416232.3" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7Q1" - ], - [ - "gene_synonym", - "rpmI" - ], - [ - "gene_synonym", - "GI:49176137" - ], - [ - "gene_synonym", - "ASAP:ABE-0005732" - ], - [ - "gene_synonym", - "ECK1715" - ], - [ - "gene_synonym", - "GeneID:946349" - ] - ], - "dna_sequence": "ATGCCAAAAATTAAGACCGTACGCGGTGCTGCTAAGCGCTTCAAAAAAACCGGTAAAGGTGGTTTTAAGCACAAGCACGCTAACCTGCGTCACATTCTGACCAAAAAAGCGACCAAACGTAAACGTCACCTGCGTCCGAAAGCCATGGTTTCCAAAGGCGATCTGGGCCTGGTAATCGCGTGCCTGCCGTACGCATAA", - "dna_sequence_length": 198, - "functions": [ - "50S ribosomal subunit protein L35" - ], - "id": "CDS_1706", - "location": [ - [ - "NC_000913", - 1799999, - "-", - 198 - ] - ], - "md5": "d31a0afcbb4bbc7edae2958e04b5d909", - "parent_gene": "", - "protein_md5": "fe1a8a3a51c56dbf0860aac70e1d7bd7", - "protein_translation": "MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDLGLVIACLPYA", - "protein_translation_length": 65, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129674" - ], - [ - "gene_synonym", - "EcoGene:EG10506" - ], - [ - "gene_synonym", - "srjA" - ], - [ - "gene_synonym", - "fit" - ], - [ - "gene_synonym", - "b1718" - ], - [ - "gene_synonym", - "infC" - ], - [ - "gene_synonym", - "NP_416233.1" - ], - [ - "gene_synonym", - "GeneID:946225" - ], - [ - "gene_synonym", - "ASAP:ABE-0005734" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A707" - ], - [ - "gene_synonym", - "JW5829" - ], - [ - "gene_synonym", - "ECK1716" - ] - ], - "dna_sequence": "ATTAAAGGCGGAAAACGAGTTCAAACGGCGCGCCCTAACCGTATCAATGGCGAAATTCGCGCCCAGGAAGTTCGCTTAACAGGTCTGGAAGGCGAGCAGCTTGGTATTGTGAGTCTGAGAGAAGCTCTGGAGAAAGCAGAAGAAGCCGGAGTAGACTTAGTCGAGATCAGCCCTAACGCCGAGCCGCCGGTTTGTCGTATAATGGATTACGGCAAATTCCTCTATGAAAAGAGCAAGTCTTCTAAGGAACAGAAGAAAAAGCAAAAAGTTATCCAGGTTAAGGAAATTAAATTCCGTCCTGGTACAGATGAAGGCGACTATCAGGTAAAACTCCGCAGCCTGATTCGCTTTCTCGAAGAGGGTGATAAAGCCAAAATCACGCTGCGTTTCCGCGGTCGTGAGATGGCGCACCAGCAAATCGGTATGGAAGTGCTTAATCGCGTGAAAGACGATTTGCAAGAACTGGCAGTGGTCGAATCCTTCCCAACGAAGATCGAAGGCCGCCAGATGATCATGGTGCTCGCTCCTAAGAAGAAACAGTAA", - "dna_sequence_length": 543, - "functions": [ - "translation initiation factor IF-3" - ], - "id": "CDS_1707", - "location": [ - [ - "NC_000913", - 1800638, - "-", - 543 - ] - ], - "md5": "0b18caac363e91acd2ef998976e4000c", - "parent_gene": "", - "protein_md5": "c96970699494faca52c721498e70a573", - "protein_translation": "MKGGKRVQTARPNRINGEIRAQEVRLTGLEGEQLGIVSLREALEKAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQKVIQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFPTKIEGRQMIMVLAPKKKQ", - "protein_translation_length": 180, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129675" - ], - [ - "gene_synonym", - "GeneID:946222" - ], - [ - "gene_synonym", - "b1719" - ], - [ - "gene_synonym", - "EcoGene:EG11001" - ], - [ - "gene_synonym", - "NP_416234.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8M3" - ], - [ - "gene_synonym", - "ASAP:ABE-0005736" - ], - [ - "gene_synonym", - "ECK1717" - ], - [ - "gene_synonym", - "thrS" - ], - [ - "gene_synonym", - "JW1709" - ] - ], - "dna_sequence": "ATGCCTGTTATAACTCTTCCTGATGGCAGCCAACGCCATTACGATCACGCTGTAAGCCCCATGGATGTTGCGCTGGACATTGGTCCAGGTCTGGCGAAAGCCTGTATCGCAGGGCGCGTTAATGGCGAACTGGTTGATGCTTGCGATCTGATTGAAAACGACGCACAACTGTCGATCATTACCGCCAAAGACGAAGAAGGTCTGGAGATCATTCGTCACTCCTGTGCGCACCTGTTAGGGCACGCGATTAAACAACTTTGGCCGCATACCAAAATGGCAATCGGCCCGGTTATTGACAACGGTTTTTATTACGACGTTGATCTTGACCGCACGTTAACCCAGGAAGATGTCGAAGCACTCGAGAAGCGGATGCATGAGCTTGCTGAGAAAAACTACGACGTCATTAAGAAGAAAGTCAGCTGGCACGAAGCGCGTGAAACTTTCGCCAACCGTGGGGAGAGCTACAAAGTCTCCATTCTTGACGAAAACATCGCCCATGATGACAAGCCAGGTCTGTACTTCCATGAAGAATATGTCGATATGTGCCGCGGTCCGCACGTACCGAACATGCGTTTCTGCCATCATTTCAAACTAATGAAAACGGCAGGGGCTTACTGGCGTGGCGACAGCAACAACAAAATGTTGCAACGTATTTACGGTACGGCGTGGGCAGACAAAAAAGCACTTAACGCTTACCTGCAGCGCCTGGAAGAAGCCGCGAAACGCGACCACCGTAAAATCGGTAAACAGCTCGACCTGTACCATATGCAGGAAGAAGCGCCGGGTATGGTATTCTGGCACAACGACGGCTGGACCATCTTCCGTGAACTGGAAGTGTTTGTTCGTTCTAAACTGAAAGAGTACCAGTATCAGGAAGTTAAAGGTCCGTTCATGATGGACCGTGTCCTGTGGGAAAAAACCGGTCACTGGGACAACTACAAAGATGCAATGTTCACCACATCTTCTGAGAACCGTGAATACTGCATTAAGCCGATGAACTGCCCGGGTCACGTACAAATTTTCAACCAGGGGCTGAAGTCTTATCGCGATCTGCCGCTGCGTATGGCCGAGTTTGGTAGCTGCCACCGTAACGAGCCGTCAGGTTCGCTGCATGGCCTGATGCGCGTGCGTGGATTTACCCAGGATGACGCGCATATCTTCTGTACTGAAGAACAAATTCGCGATGAAGTTAACGGATGTATCCGTTTAGTCTATGATATGTACAGCACTTTTGGCTTCGAGAAGATCGTCGTCAAACTCTCCACTCGTCCTGAAAAACGTATTGGCAGCGACGAAATGTGGGATCGTGCTGAGGCGGACCTGGCGGTTGCGCTGGAAGAAAACAACATCCCGTTTGAATATCAACTGGGTGAAGGCGCTTTCTACGGTCCGAAAATTGAATTTACCCTGTATGACTGCCTCGATCGTGCATGGCAGTGCGGTACAGTACAGCTGGACTTCTCTTTGCCGTCTCGTCTGAGCGCTTCTTATGTAGGCGAAGACAATGAACGTAAAGTACCGGTAATGATTCACCGCGCAATTCTGGGGTCGATGGAACGTTTCATCGGTATCCTGACCGAAGAGTTCGCTGGTTTCTTCCCGACCTGGCTTGCGCCGGTTCAGGTTGTTATCATGAATATTACCGATTCACAGTCTGAATACGTTAACGAATTGACGCAAAAACTATCAAATGCGGGCATTCGTGTTAAAGCAGACTTGAGAAATGAGAAGATTGGCTTTAAAATCCGCGAGCACACTTTGCGTCGCGTCCCATATATGCTGGTCTGTGGTGATAAAGAGGTGGAATCAGGCAAAGTTGCCGTTCGCACCCGCCGTGGTAAAGACCTGGGAAGCATGGACGTAAATGAAGTGATCGAGAAGCTGCAACAAGAGATTCGCAGCCGCAGTCTTAAACAATTGGAGGAATAA", 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"type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005740" - ], - [ - "gene_synonym", - "GeneID:948935" - ], - [ - "gene_synonym", - "ASAP:ABE-0005742" - ], - [ - "gene_synonym", - "JW5278" - ], - [ - "gene_synonym", - "JW1710" - ], - [ - "gene_synonym", - "EcoGene:EG13983" - ], - [ - "gene_synonym", - "b4494" - ], - [ - "gene_synonym", - "arpB" - ], - [ - "gene_synonym", - "ydiX" - ], - [ - "gene_synonym", - "ASAP:ABE-0285095" - ], - [ - "gene_synonym", - "ECK1718" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76205" - ], - [ - "gene_synonym", - "ydiW" - ] - ], - "dna_sequence": "ATGAGTCAAAACGATATCATTATCAGAACTCATTATAAGTCTCCTCATAGATTGCACATCGATAGCGACATACCAACACCTTCATCAGAGCCTATTAATCAATTTGCGCGCCAGCTCATCACCCTACTTGATACCTCTGACTTAAGTTCGATGCTGTCATACTGTGTTACTCAGGAATTTACCGCAAACTGTCGAAAAATATCACAAAATTGTTATTCCACTGCCCTTTTTACCATTAACTTTGCCACTTCACCCATCCATACAGAAAATATACTCATTACATTACACTATAAAAAAGAAATCATTTCCTTATTACTGGAAACCACGCCTATTAAAGCTAACCATTTGCGAAGCATACTGGATTATATTGAACAGGAACAGTTAACTGCTGAAGATCGTAACCATTGTATGAAACTGTCTAAAAAAAAATCCATAGAGAAAAAAACTATACACCCAACAGTAAATCTCAATGGTAGTGCATGTTTTTTGCAATCTCCTTCTGACGCTATTTTTTGTCGCCATCTGTCATTGCAATACGCCCTTGATTCATTGAGAAATGGAAAAGGCAAAGTCAACCTGATTAAACATTACTCCTCCGTTGAATCCATACAGCAGCATGTCCCCTTAGTCCGGGACGCGGAGTTCAGAGCATTACTTCGCCATCCTCCTGCAGGGAGTCGCGTTATCGCGAGTAAGGATTTTGGCTTCGCTTTAGATATTTTCTTTTGTCGAATGATGGCAAACAATGTCAGTCATATGTCCGCGATTTTATATATAGACAATCATACTTTGTCAGTAAGGCTACGAATAAAGCAGTCAGTGTATGGACAATTAAATTATGTTGTGTCCGTTTACGACCCGAACGATACCAACGTTGCCGTCAGAGACACCCACAGGACAGCACGGGGCTTTCTTTCGCTTGATAAGTTCATCAGTTCAGGTCCCGATGCTCAGACCTGGGCTGATAGATATGTTCGCAACTGTGCAATTGCTATTCTGCCCCTATTACCTGTGGGAGTTCCAGGGGCTATTTTCGCGGGTATTGCATCACGAATGCCATTTGCCCCTATACATCCATCGGCAATGTTGTTAATAATGGCTACAGGCCAGTCTCAACAGCTTATTACATTATTCAAACAGTTGCCCATACTCCCTGAAAAAGAAATCATTGAAATAATAACTGCGCAGAATAGCGTTGGTACACCTGCTTTATTTTTGGCTATGATGAACGGACATACTGACAACGTGAAAATATTTATGCAAGAAATTCAGTCACTGGTAGATAATCACATCATTCATGAAGATAATCTGGTTAAATTACTGCAAACTAAAAGTGCTAACGAAACACCTGGACTTTATATCTCCATGTTGTATGGATTCGATGAAATAATCGATATCTTTCTGAATGCATTAACCACTCCAATAGCACAAGAGCTTTTAAACAAAAAACTGGTGATGAGTATTTTAGCCATGAAAATACATGATGGTGAGCCAGGATTATACGCCGCAATGGAAAATAATCACCCTTTGTGTGTCACACGGTTCCTCTCTAAAATTAATGGCATCGCCTTTAAATACAAGTTGAGCAAAGCTAACATCATGGATTTATTAAAAGGAGCTACAGCACAGGGAACCCCTGCATTATACATCGCCATGAGCAAGGGTAATGAAGACGTCGTGTTATCTTATATATCGACGCTGGGTGCTTTTGCAAAAAAACATTCTTTTAGTCAACATCAGTTATTTACACTATTGGCCGCTAAAAATCATGACAACATGTCAGCTGTTCATATAGCCATTCATCATAAGCATTATAAAACTGTAGAAACATATTATGCTGCTATTAATGCAATCAGCCAAAGCCTGAGTTTTAGTGCTGATGAAATAAAGACGTATTTATAA", 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"CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q2EES1" - ], - [ - "gene_synonym", - "YP_588455.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0285056" - ], - [ - "gene_synonym", - "GI:145698274" - ], - [ - "gene_synonym", - "JW5911" - ], - [ - "gene_synonym", - "yniD" - ], - [ - "gene_synonym", - "ECK1719" - ], - [ - "gene_synonym", - "GeneID:1450269" - ], - [ - "gene_synonym", - "EcoGene:EG14423" - ], - [ - "gene_synonym", - "b4535" - ] - ], - "dna_sequence": "ATGCCGACTAAACGCTTTGATAAAAAACACTGGAAGATGGTGGTGGTGCTACTGGCAATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGA", - "dna_sequence_length": 108, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1710", - "location": [ - [ - "NC_000913", - 1805165, - "+", - 108 - ] - ], - "md5": "824434fa8a786112ec92e140bdf0fa36", - "parent_gene": "", - "protein_md5": "ab82797d0aa8011eee156c8755509606", - "protein_translation": "MPTKRFDKKHWKMVVVLLAICGAMLLLRWAAMIWG", - "protein_translation_length": 35, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129676" - ], - [ - "gene_synonym", - "ASAP:ABE-0005744" - ], - [ - "gene_synonym", - "ECK1720" - ], - [ - "gene_synonym", - "JW1711" - ], - [ - "gene_synonym", - "NP_416236.1" - ], - [ - "gene_synonym", - "EcoGene:EG13984" - ], - [ - "gene_synonym", - "ydiY" - ], - [ - "gene_synonym", - "GeneID:946218" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76206" - ], - [ - "gene_synonym", - "b1722" - ] - ], - "dna_sequence": "ATGAAGCTTTTGAAGACAGTTCCTGCCATCGTTATGTTGGCGGGGGGCATGTTTGCGTCACTGAATGCAGCTGCCGATGATTCCGTTTTTACTGTCATGGATGATCCTGCCAGCGCTAAAAAACCTTTCGAAGGTAATCTGAACGCAGGATATCTTGCACAATCAGGCAATACGAAAAGCTCCTCACTTACGGCTGACACCACCATGACCTGGTATGGACACACCACTGCCTGGTCGCTGTGGGGGAACGCCAGTAATACTTCTTCTAATGATGAGCGTTCTTCAGAAAAATATGCGGCGGGCGGGCGTAGCCGTTTTAATTTAACTGATTATGACTATTTATTTGGTCAGGCAAGCTGGCTGACAGACCGTTATAACGGCTATCGAGAGCGCGATGTGTTGACCGCGGGTTATGGTCGTCAGTTTTTGAATGGCCCGGTACACAGTTTCCGCTTTGAATTCGGTCCAGGTGTGCGTTACGACAAATATACCGACAATGCCAGTGAAACCCAGCCGCTGGGCTATGCCTCCGGGGCTTATGCATGGCAGTTGACTGACAACGCTAAATTTACGCAGGGTGTTTCGGTCTTTGGCGCGGAAGACACAACGCTGAACTCCGAAAGCGCATTAAATGTTGCTATTAATGAACATTTTGGACTGAAGGTGGCTTACAACGTCACATGGAACTCTGAACCTCCAGAGTCTGCACCGGAACATACCGACCGTCGGACAACCTTATCGCTGGGCTACAGCATGTAA", - "dna_sequence_length": 759, - "functions": [ - "acid-inducible putative outer membrane protein" - ], - "id": "CDS_1711", - "location": [ - [ - "NC_000913", - 1806083, - "-", - 759 - ] - ], - "md5": "e2dfa032e917690cea4a4c83a001f4f0", - "parent_gene": "", - "protein_md5": "84ab58669017d6a598e21ffc93cc3041", - "protein_translation": "MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFEGNLNAGYLAQSGNTKSSSLTADTTMTWYGHTTAWSLWGNASNTSSNDERSSEKYAAGGRSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDKYTDNASETQPLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHFGLKVAYNVTWNSEPPESAPEHTDRRTTLSLGYSM", - "protein_translation_length": 252, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416237.3" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06999" - ], - [ - "gene_synonym", - "JW5280" - ], - [ - "gene_synonym", - "ECK1721" - ], - [ - "gene_synonym", - "ASAP:ABE-0005748" - ], - [ - "gene_synonym", - "GeneID:946230" - ], - [ - "gene_synonym", - "pfkB" - ], - [ - "gene_synonym", - "EcoGene:EG10700" - ], - [ - "gene_synonym", - "b1723" - ], - [ - "gene_synonym", - "GI:49176138" - ] - ], - "dna_sequence": "ATGGTACGTATCTATACGTTGACACTTGCGCCCTCTCTCGATAGCGCAACAATTACCCCGCAAATTTATCCCGAAGGAAAACTGCGCTGTACCGCACCGGTGTTCGAACCCGGGGGCGGCGGCATCAACGTCGCCCGCGCCATTGCCCATCTTGGAGGCAGTGCCACAGCGATCTTCCCGGCGGGTGGCGCGACCGGCGAACACCTGGTTTCACTGTTGGCGGATGAAAATGTCCCCGTCGCTACTGTAGAAGCCAAAGACTGGACCCGGCAGAATTTACACGTACATGTGGAAGCAAGCGGTGAGCAGTATCGTTTTGTTATGCCAGGCGCGGCATTAAATGAAGATGAGTTTCGCCAGCTTGAAGAGCAAGTTCTGGAAATTGAATCCGGGGCCATCCTGGTCATAAGCGGAAGCCTGCCGCCAGGTGTGAAGCTGGAAAAATTAACCCAACTGATTTCCGCTGCGCAAAAACAAGGGATCCGCTGCATCGTCGACAGTTCTGGCGAAGCGTTAAGTGCAGCACTGGCAATTGGTAACATCGAGTTGGTTAAGCCTAACCAAAAAGAACTCAGTGCGCTGGTGAATCGCGAACTCACCCAGCCGGACGATGTCCGCAAAGCCGCGCAGGAAATCGTTAATAGCGGCAAGGCCAAACGGGTTGTCGTTTCCCTGGGTCCACAAGGAGCGCTGGGTGTTGATAGTGAAAACTGTATTCAGGTGGTGCCACCACCGGTGAAAAGCCAGAGTACCGTTGGCGCTGGTGACAGCATGGTCGGCGCGATGACACTGAAACTGGCAGAAAATGCCTCTCTTGAAGAGATGGTTCGTTTTGGCGTAGCTGCGGGGAGTGCAGCCACACTCAATCAGGGAACACGTCTGTGCTCCCATGACGATACGCAAAAAATTTACGCTTACCTTTCCCGCTAA", - "dna_sequence_length": 930, - "functions": [ - "6-phosphofructokinase II" - ], - "id": "CDS_1712", - "location": [ - [ - "NC_000913", - 1806370, - "+", - 930 - ] - ], - "md5": "8f8649b47d25f7a3a36f25672e4cb4c7", - "parent_gene": "", - "protein_md5": "8bfa12521f9bb04393d8f5639d9cf074", - "protein_translation": "MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGEQYRFVMPGAALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLCSHDDTQKIYAYLSR", - "protein_translation_length": 309, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416238.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0005751" - ], - [ - "gene_synonym", - "GeneID:946232" - ], - [ - "gene_synonym", - "ECK1722" - ], - [ - "gene_synonym", - "JW1713" - ], - [ - "gene_synonym", - "GI:16129678" - ], - [ - "gene_synonym", - "EcoGene:EG13985" - ], - [ - "gene_synonym", - "ydiZ" - ], - [ - "gene_synonym", - "b1724" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64479" - ] - ], - "dna_sequence": "ATGGCCAGTGGCGATCTTGTCCGTTATGTCATAACCGTCATGTTGCATGAGGATACATTGACTGAAATTAACGAGTTGAATAATTACCTGACTCGCGACGGTTTTTTGCTCACTATGACGGATGATGAGGGAAATATCCATGAGCTGGGAACTAACACTTTTGGACTTATCAGTACCCAAAGTGAAGAAGAAATTAGAGAACTGGTTTCGGGGCTTACCCAAAGTGCAACCGGCAAAGATCCTGAAATCACCATCACGACCTGGGAGGAATGGAATAGCAACAGAAAATAA", - "dna_sequence_length": 291, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1713", - "location": [ - [ - "NC_000913", - 1807400, - "+", - 291 - ] - ], - "md5": "4a12a5ddf54b0bdceb17ed53beb8ed10", - "parent_gene": "", - "protein_md5": "590127badbcf03f51349813aa6afeb2f", - "protein_translation": "MASGDLVRYVITVMLHEDTLTEINELNNYLTRDGFLLTMTDDEGNIHELGTNTFGLISTQSEEEIRELVSGLTQSATGKDPEITITTWEEWNSNRK", - "protein_translation_length": 96, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416239.1" - ], - [ - "gene_synonym", - "ECK1723" - ], - [ - "gene_synonym", - "ASAP:ABE-0005755" - ], - [ - "gene_synonym", - "GI:16129679" - ], - [ - "gene_synonym", - "JW1714" - ], - [ - "gene_synonym", - "GeneID:946236" - ], - [ - "gene_synonym", - "EcoGene:EG13986" - ], - [ - "gene_synonym", - "yniA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77739" - ], - [ - "gene_synonym", - "b1725" - ] - ], - "dna_sequence": "ATGTGGCAGGCAATCAGTCGTCTTTTGAGCGAGCAGTTAGGTGAAGGCGAAATCGAACTGCGTAATGAACTGCCTGGCGGAGAAGTCCATGCCGCATGGCATTTGCGCTATGCAGGACATGATTTTTTCGTCAAATGTGATGAAAGGGAACTGCTTCCCGGTTTTACCGCCGAAGCCGACCAACTGGAGTTACTGTCGCGTAGTAAAACCGTCACCGTGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACGCTGTTAAATCGTGCAAGGTTATTTGGCGGTCAGCATTTGGTTATTGCTCAGCAGTCATTGGATAGATTATTAGCAGCATGA", - "dna_sequence_length": 861, - "functions": [ - "fructosamine kinase family protein" - ], - "id": "CDS_1714", - "location": [ - [ - "NC_000913", - 1807796, - "+", - 861 - ] - ], - "md5": "c1af06240a5361ed9a2c67981e72ae49", - "parent_gene": "", - "protein_md5": "5c9e9fcaf450e96d87a02972c30b517c", - "protein_translation": "MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQPQFGLDFDNALSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA", - "protein_translation_length": 286, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416240.1" - ], - [ - "gene_synonym", - "ECK1724" - ], - [ - "gene_synonym", - "ASAP:ABE-0005757" - ], - [ - "gene_synonym", - "JW1715" - ], - [ - "gene_synonym", - "GeneID:945140" - ], - [ - "gene_synonym", - "EcoGene:EG13987" - ], - [ - "gene_synonym", - "GI:16129680" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76208" - ], - [ - "gene_synonym", - "yniB" - ], - [ - "gene_synonym", - "b1726" - ] - ], - 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"MTYQQAGRIAVLKRILGWVIFIPALISTLISLLKFMNTRQENKEGINAVMLDFTHVMIDMMQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQDSGARMSRQARFLREGVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYILPVICIAAGYVFFSLLGFI", - "protein_translation_length": 178, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1725" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77247" - ], - [ - "gene_synonym", - "ASAP:ABE-0005761" - ], - [ - "gene_synonym", - "NP_416241.1" - ], - [ - "gene_synonym", - "JW1716" - ], - [ - "gene_synonym", - "GI:16129681" - ], - [ - "gene_synonym", - "GeneID:945632" - ], - [ - "gene_synonym", - "EcoGene:EG13988" - ], - [ - "gene_synonym", - "b1727" - ], - [ - "gene_synonym", - "yniC" - ] - ], - "dna_sequence": "ATGTCAACCCCGCGTCAGATTCTTGCTGCAATTTTTGATATGGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGACCCTCTGACCTGCGTAGCGCTGGAAGATTCGGTAAATGGCATGATCGCCTCTAAAGCAGCCCGCATGCGTTCCATCGTCGTTCCTGCGCCAGAAGCGCAAAATGATCCACGTTTTGTATTAGCAGACGTCAAACTTTCATCGCTGACAGAACTCACCGCAAAAGACCTTCTCGGTTAA", - "dna_sequence_length": 669, - "functions": [ - "2-deoxyglucose-6-P phosphatase" - ], - "id": "CDS_1716", - "location": [ - [ - "NC_000913", - 1809380, - "+", - 669 - ] - ], - "md5": "6ff5d6cb03ed5aa8edfde4b37a3a090b", - "parent_gene": "", - "protein_md5": "f7aa6c1b22de856efc1870b36b05897a", - "protein_translation": "MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLADVKLSSLTELTAKDLLG", - "protein_translation_length": 222, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1726" - ], - [ - "gene_synonym", - "JW5281" - ], - [ - "gene_synonym", - "ydjM" - ], - [ - "gene_synonym", - "ASAP:ABE-0005768" - ], - [ - "gene_synonym", - "b1728" - ], - [ - "gene_synonym", - "NP_416242.6" - ], - [ - "gene_synonym", - "GeneID:945644" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64481" - ], - [ - "gene_synonym", - "GI:226524720" - ], - [ - "gene_synonym", - "EcoGene:EG13989" - ] - ], - "dna_sequence": "ATGACGGCGGAAGGTCACCTTCTCTTTTCTATTGCTTGTGCGGTATTTGCCAAAAATGCCGAGCTGACGCCCGTGCTGGCACAGGGTGACTGGTGGCATATTGTCCCTTCCGCAATCCTGACGTGTTTGTTACCGGACATCGATCACCCAAAGTCGTTTCTTGGGCAGCGATTAAAATGGATATCAAAACCGATCGCCCGCGCTTTTGGGCATCGTGGTTTTACCCACAGTCTGCTGGCGGTATTTGCGCTGCTGGCAACCTTTTACCTTAAGGTTCCGGAAGGCTGGTTCATTCCGGCTGATGCGCTACAAGGAATGGTGCTGGGTTATTTGAGCCACATACTTGCCGATATGCTGACACCCGCCGGTGTTCCCCTGCTCTGGCCATGCCGCTGGCGTTTCCGCTTGCCTATCCTGGTTCCCCAAAAGGGCAACCAACTGGAACGTTTTATCTGCATGGCATTATTTGTCTGGTCGGTATGGATGCCCCATTCATTACCCGAGAACAGCGCTGTTCGTTGGTCATCGCAAATGATCAATACCTTGCAGATCCAGTTTCATCGGCTTATTAAGCATCAGGTTGAATACTAA", - "dna_sequence_length": 591, - "functions": [ - "inner membrane protein regulated by LexA" - ], - "id": "CDS_1717", - "location": [ - [ - "NC_000913", - 1810211, - "+", - 591 - ] - ], - "md5": "9c78f661716b2b15246dbb8be4eeadf3", - "parent_gene": "", - "protein_md5": "7f0b657c1abe847f75166fa4410f4fbc", - "protein_translation": "MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLLPDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLAVFALLATFYLKVPEGWFIPADALQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSVWMPHSLPENSAVRWSSQMINTLQIQFHRLIKHQVEY", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1718" - ], - [ - "gene_synonym", - "ECK1727" - ], - [ - "gene_synonym", - "GeneID:946238" - ], - [ - "gene_synonym", - "ASAP:ABE-0005771" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77529" - ], - [ - "gene_synonym", - "EcoGene:EG13990" - ], - [ - "gene_synonym", - "b1729" - ], - [ - "gene_synonym", - "GI:16129683" - ], - [ - "gene_synonym", - "ydjN" - ], - [ - "gene_synonym", - "NP_416243.1" - ] - ], - "dna_sequence": "ATGAACTTTCCATTAATTGCGAACATCGTGGTGTTCGTTGTACTGCTGTTTGCGCTGGCTCAGACCCGCCATAAACAGTGGAGTCTGGCGAAAAAAGTGCTGGTGGGTCTGGTGATGGGTGTGGTTTTTGGCCTTGCCCTGCATACCATTTATGGTTCTGACAGCCAGGTACTTAAAGATTCTGTACAGTGGTTTAACATCGTTGGTAACGGCTATGTTCAACTGCTGCAAATGATCGTTATGCCGTTAGTCTTCGCCTCTATTCTGAGCGCGGTTGCCCGTCTGCATAACGCATCTCAGTTAGGCAAAATCAGTTTTCTGACCATCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTCCTACCTCGGTCTGCTGATTATGTTTGCAGTGCATGGCATTCTGCTGGGCATTAATGGCGTGAGTCCGCTGAAGTACTTCCGTAAGGTATGGCCTGTGCTGACGTTTGCCTTTACCAGCCGTTCCAGTGCTGCGTCTATCCCACTGAATGTGGAAGCACAAACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGTTTCGCCGCCTCTTTCGGTGCAACCATTGGTCAGAACGGCTGCGCCGGTTTGTATCCGGCAATGCTGGCGGTGATGGTTGCGCCTACGGTTGGCATTAACCCGCTGGACCCGATGTGGATTGCGACGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGCGTTGCCGGTGTCGGTGGTGGTGCAACTTTCGCCGCACTGATTGTACTGCCTGCGATGGGCCTGCCAGTAACCCTGGTGGCGCTGTTAATCTCCGTTGAACCGCTTATCGACATGGGCCGTACGGCGTTAAACGTTAGTGGCTCGATGACAGCTGGCACGCTGACCAGCCAGTGGCTGAAGCAAACCGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAA", - "dna_sequence_length": 1392, - "functions": [ - "putative transporter" - ], - "id": "CDS_1718", - "location": [ - [ - "NC_000913", - 1810934, - "+", - 1392 - ] - ], - "md5": "c4742ed195714012a137cd2e985ca443", - "parent_gene": "", - "protein_md5": "d591201bb48eb0d191bfafac27ba17cd", - "protein_translation": "MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSDLSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLAAIDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIVLPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHH", - "protein_translation_length": 463, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1719" - ], - [ - "gene_synonym", - "ASAP:ABE-0005773" - ], - [ - "gene_synonym", - "ECK1728" - ], - [ - "gene_synonym", - "NP_416244.2" - ], - [ - "gene_synonym", - "GeneID:946237" - ], - [ - "gene_synonym", - "EcoGene:EG13991" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76210" - ], - [ - "gene_synonym", - "b1730" - ], - [ - "gene_synonym", - "GI:226524721" - ], - [ - "gene_synonym", - "ydjO" - ] - ], - "dna_sequence": "ATGTTTTCTACAAACTTAATACAGAGTAATTATGGTGATTTAAATATTAAAAGCCTGGCTTTCGACTCTTTTAAAGAAAGGCTGCAGTCTACTATGACAGCACTCACTTTCTTTATATCAACGGGTCAATGTGACTGCGATGAAATAGCAGAATCAAACTTTAATTATATGATTGCCTATATGTCTAACATTAACTATGATGCCTCAAAGCCAGGAGCGCCAGCACTTAGTTTTGATACATATCTGCAGGACAATGTTAAATATAGAGTAATAATTAATAATCTTTATGGTAGTGAAATTCGGATAAGAGGTATAAATAAAGATTTTATTGGAATGGATGTCACTTCTGTATTTCGCCCAGAAAAAATGACCAATTTGATCAGTATAAAAAACAGGTTGGTTATTCACTATTTAAGGACTATATACTATGAACAAAATTATATACATCCTGTCGGGAGCATTTTTGCTGCGATTCAAAAAAATGAGAGTCTCCTAAAGTTTCCTTCGATAATATCAATGCTTAATATCAATCTTCTTTTTAATCCACTAAATCTTCCGGGAATGGGAAGTGGTGTGCTTGAAGATATTATGAGTATTCCAGATAGTTCACTTAGAAAACGTCTCGGGTATGAGGTTTTAAGCTTCTCGCTACAGGCACATTCATTGAGCCAGGAATGTATTGATAAGTTGGACATTTTTTTCGCTGACGATCTGTTTAAATATGAGTCAGTATGCATCGCCGCGATGGAACATTTAAAAAGTAAGGCAACGGCCCCTATACAAAACGGACCGTTGCCAGCATAA", - "dna_sequence_length": 804, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1719", - "location": [ - [ - "NC_000913", - 1813132, - "-", - 804 - ] - ], - "md5": "e9280cfedff630d2e70114593ab05957", - "parent_gene": "", - "protein_md5": "b6300e0f8eb33ec87f6c92493e53e91e", - "protein_translation": "MFSTNLIQSNYGDLNIKSLAFDSFKERLQSTMTALTFFISTGQCDCDEIAESNFNYMIAYMSNINYDASKPGAPALSFDTYLQDNVKYRVIINNLYGSEIRIRGINKDFIGMDVTSVFRPEKMTNLISIKNRLVIHYLRTIYYEQNYIHPVGSIFAAIQKNESLLKFPSIISMLNINLLFNPLNLPGMGSGVLEDIMSIPDSSLRKRLGYEVLSFSLQAHSLSQECIDKLDIFFADDLFKYESVCIAAMEHLKSKATAPIQNGPLPA", - "protein_translation_length": 267, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ydjP" - ], - [ - "gene_synonym", - "cedA" - ], - [ - "gene_synonym", - "NP_416245.2" - ], - [ - "gene_synonym", - "GeneID:946235" - ], - [ - "gene_synonym", - "JW1720" - ], - [ - "gene_synonym", - "ECK1729" - ], - [ - "gene_synonym", - "GI:145698276" - ], - [ - "gene_synonym", - "EcoGene:EG13992" - ], - [ - "gene_synonym", - "b1731" - ], - [ - "gene_synonym", - "ASAP:ABE-0005776" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE60" - ] - ], - "dna_sequence": "ATGAAGAAACCGCTCCGCCAGCAAAACCGCCAGATTATTAGCTATGTCCCACGCACGGAACCCGCGCCGCCAGAACATGCGATAAAGATGGATTCGTTTCGTGATGTCTGGATGCTGCGTGGCAAATATGTTGCGTTTGTACTGATGGGAGAGTCATTTCTGCGCTCACCGGCGTTTACTGTGCCTGAATCTGCCCAACGTTGGGCAAATCAGATCCGCCAGGAAGGGGAAGTGACTGAGTAA", - "dna_sequence_length": 243, - "functions": [ - "cell division modulator" - ], - "id": "CDS_1720", - "location": [ - [ - "NC_000913", - 1813663, - "-", - 243 - ] - ], - "md5": "3ade9149ad5d9d29d87a4e2c2d8cb798", - "parent_gene": "", - "protein_md5": "b38cefdfd3bdda057a46ab07a66bcd72", - "protein_translation": "MKKPLRQQNRQIISYVPRTEPAPPEHAIKMDSFRDVWMLRGKYVAFVLMGESFLRSPAFTVPESAQRWANQIRQEGEVTE", - "protein_translation_length": 80, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005780" - ], - [ - "gene_synonym", - "YP_025308.1" - ], - [ - "gene_synonym", - "EcoGene:EG10509" - ], - [ - "gene_synonym", - "JW1721" - ], - [ - "gene_synonym", - "GeneID:946234" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21179" - ], - [ - "gene_synonym", - "GI:49176140" - ], - [ - "gene_synonym", - "b1732" - ], - [ - "gene_synonym", - "ECK1730" - ], - [ - "gene_synonym", - "katE" - ] - ], - "dna_sequence": "ATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTATTCTGCGCGAGAAAATCACCCACTTTGACCATGAGCGCATTCCGGAACGTATTGTTCATGCACGCGGATCAGCCGCTCACGGTTATTTCCAGCCATATAAAAGCTTAAGCGATATTACCAAAGCGGATTTCCTCTCAGATCCGAACAAAATCACCCCAGTATTTGTACGTTTCTCTACCGTTCAGGGTGGTGCTGGCTCTGCTGATACCGTGCGTGATATCCGTGGCTTTGCCACCAAGTTCTATACCGAAGAGGGTATTTTTGACCTCGTTGGCAATAACACGCCAATCTTCTTTATCCAGGATGCGCATAAATTCCCCGATTTTGTTCATGCGGTAAAACCAGAACCGCACTGGGCAATTCCACAAGGGCAAAGTGCCCACGATACTTTCTGGGATTATGTTTCTCTGCAACCTGAAACTCTGCACAACGTGATGTGGGCGATGTCGGATCGCGGCATCCCCCGCAGTTACCGCACCATGGAAGGCTTCGGTATTCACACCTTCCGCCTGATTAATGCCGAAGGGAAGGCAACGTTTGTACGTTTCCACTGGAAACCACTGGCAGGTAAAGCCTCACTCGTTTGGGATGAAGCACAAAAACTCACCGGACGTGACCCGGACTTCCACCGCCGCGAGTTGTGGGAAGCCATTGAAGCAGGCGATTTTCCGGAATACGAACTGGGCTTCCAGTTGATTCCTGAAGAAGATGAATTCAAGTTCGACTTCGATCTTCTCGATCCAACCAAACTTATCCCGGAAGAACTGGTGCCCGTTCAGCGTGTCGGCAAAATGGTGCTCAATCGCAACCCGGATAACTTCTTTGCTGAAAACGAACAGGCGGCTTTCCATCCTGGGCATATCGTGCCGGGACTGGACTTCACCAACGATCCGCTGTTGCAGGGACGTTTGTTCTCCTATACCGATACACAAATCAGTCGTCTTGGTGGGCCGAATTTCCATGAGATTCCGATTAACCGTCCGACCTGCCCTTACCATAATTTCCAGCGTGACGGCATGCATCGCATGGGGATCGACACTAACCCGGCGAATTACGAACCGAACTCGATTAACGATAACTGGCCGCGCGAAACACCGCCGGGGCCGAAACGCGGCGGTTTTGAATCATACCAGGAGCGCGTGGAAGGCAATAAAGTTCGCGAGCGCAGCCCATCGTTTGGCGAATATTATTCCCATCCGCGTCTGTTCTGGCTAAGTCAGACGCCATTTGAGCAGCGCCATATTGTCGATGGTTTCAGTTTTGAGTTAAGCAAAGTCGTTCGTCCGTATATTCGTGAGCGCGTTGTTGACCAGCTGGCGCATATTGATCTCACTCTGGCCCAGGCGGTGGCGAAAAATCTCGGTATCGAACTGACTGACGACCAGCTGAATATCACCCCACCTCCGGACGTCAACGGTCTGAAAAAGGATCCATCCTTAAGTTTGTACGCCATTCCTGACGGTGATGTGAAAGGTCGCGTGGTAGCGATTTTACTTAATGATGAAGTGAGATCGGCAGACCTTCTGGCCATTCTCAAGGCGCTGAAGGCCAAAGGCGTTCATGCCAAACTGCTCTACTCCCGAATGGGTGAAGTGACTGCGGATGACGGTACGGTGTTGCCTATAGCCGCTACCTTTGCCGGTGCACCTTCGCTGACGGTCGATGCGGTCATTGTCCCTTGCGGCAATATCGCGGATATCGCTGACAACGGCGATGCCAACTACTACCTGATGGAAGCCTACAAACACCTTAAACCGATTGCGCTGGCGGGTGACGCGCGCAAGTTTAAAGCAACAATCAAGATCGCTGACCAGGGTGAAGAAGGGATTGTGGAAGCTGACAGCGCTGACGGTAGTTTTATGGATGAACTGCTAACGCTGATGGCAGCACACCGCGTGTGGTCACGCATTCCTAAGATTGACAAAATTCCTGCCTGA", 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"MSQHNEKNPHQHQSPLHDSSEAKPGMDSLAPEDGSHRPAAEPTPPGAQPTAPGSLKAPDTRNEKLNSLEDVRKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNGLKKDPSLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCGNIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIADQGEEGIVEADSADGSFMDELLTLMAAHRVWSRIPKIDKIPA", - "protein_translation_length": 753, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "chbG" - ], - [ - "gene_synonym", - "NP_416247.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0005783" - ], - [ - "gene_synonym", - "EcoGene:EG12198" - ], - [ - "gene_synonym", - "JW1722" - ], - [ - "gene_synonym", - "GeneID:946231" - ], - [ - "gene_synonym", - "ydjC" - ], - [ - "gene_synonym", - "GI:16129687" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37794" - ], - [ - "gene_synonym", - "ECK1731" - ], - [ - "gene_synonym", - "b1733" - ], - [ - "gene_synonym", - "celG" - ] - ], - "dna_sequence": "ATGGAACGCTTACTGATTGTTAATGCCGATGATTTTGGCTTAAGCAAAGGTCAGAACTACGGCATTATCGAGGCCTGTCGCAATGGGATTGTCACGTCGACGACGGCGCTGGTGAATGGGCAGGCTATTGACCATGCGGTGCAGTTGAGTCGTGATGAACCGAGTCTGGCCATAGGGATGCACTTTGTCCTTACTATGGGTAAGCCACTGACAGCTATGCCGGGGTTAACCCGCGATGGTGTGCTGGGAAAATGGATCTGGCAGTTGGCAGAAGAAGATGCTTTACCGCTGGAAGAAATTACTCAGGAGCTTGTCAGTCAGTATTTGCGTTTCATTGAGCTATTTGGACGCAAACCTACGCATCTTGATAGCCATCATCATGTGCATATGTTCCCGCAGATTTTCCCGATTGTTGCCAGGTTTGCGGCAGAGCAGGGCATTGCGTTGCGGGCGGATCGTCAGATGGCGTTTGATTTGCCGGTCAACCTGCGCACTACCCAGGGATTCAGCAGTGCATTCTACGGTGAAGAGATCAGTGAGTCGCTGTTCCTGCAAGTGCTGGATGACGCAGGCCATCGGGGTGATCGTTCGCTGGAGGTGATGTGTCATCCGGCGTTTATCGATAATACTATCCGTCAGAGTGCTTACTGTTTCCCACGCTTAACGGAGCTGGATGTGTTGACATCAGCGTCGTTGAAAGGTGCTATCGCTCAGCGTGGTTATCGGTTGGGGAGTTATCGGGATGTGTAA", - "dna_sequence_length": 750, - "functions": [ - "chito-oligosaccharide deacetylase" - ], - "id": "CDS_1722", - "location": [ - [ - "NC_000913", - 1817135, - "-", - 750 - ] - ], - "md5": "5c06eb9c621c2baa05369b0f1f5161c9", - "parent_gene": "", - "protein_md5": "b0a7142fddbbed4a3af1f7b0f993e0ca", - "protein_translation": "MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAIDHAVQLSRDEPSLAIGMHFVLTMGKPLTAMPGLTRDGVLGKWIWQLAEEDALPLEEITQELVSQYLRFIELFGRKPTHLDSHHHVHMFPQIFPIVARFAAEQGIALRADRQMAFDLPVNLRTTQGFSSAFYGEEISESLFLQVLDDAGHRGDRSLEVMCHPAFIDNTIRQSAYCFPRLTELDVLTSASLKGAIAQRGYRLGSYRDV", - "protein_translation_length": 249, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "chbF" - ], - [ - "gene_synonym", - "ASAP:ABE-0005785" - ], - [ - "gene_synonym", - "NP_416248.1" - ], - [ - "gene_synonym", - "JW1723" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17411" - ], - [ - "gene_synonym", - "GeneID:946266" - ], - [ - "gene_synonym", - "EcoGene:EG10144" - ], - [ - "gene_synonym", - "ydjD" - ], - [ - "gene_synonym", - "celF" - ], - [ - "gene_synonym", - "ECK1732" - ], - [ - "gene_synonym", - "GI:16129688" - ], - [ - "gene_synonym", - "b1734" - ] - ], - "dna_sequence": "ATGAGCCAGAAATTAAAAGTCGTCACTATTGGTGGCGGGAGCAGCTATACCCCGGAGTTACTGGAAGGATTTATTAAGCGTTATCACGAATTGCCGGTCAGCGAATTATGGCTGGTGGATGTCGAAGGTGGTAAACCGAAACTGGATATTATTTTCGATCTCTGCCAACGGATGATTGATAACGCTGGCGTCCCGATGAAGCTTTATAAAACGCTGGATCGCCGCGAAGCATTGAAAGATGCTGATTTCGTTACTACCCAACTGCGCGTTGGCCAATTACCGGCGCGTGAACTGGATGAACGTATTCCATTAAGTCATGGTTATCTTGGTCAGGAAACCAACGGCGCGGGCGGTTTGTTTAAAGGTCTGCGTACCATTCCGGTGATTTTTGACATCGTAAAAGATGTCGAAGAACTTTGTCCGAATGCATGGGTGATTAACTTCACTAACCCGGCGGGAATGGTCACTGAAGCCGTTTATCGTCATACCGGATTTAAACGCTTTATCGGCGTGTGTAATATTCCGATCGGCATGAAGATGTTTATTCGCGATGTTCTGATGCTGAAAGACAGCGATGATTTATCTATCGATTTGTTCGGCCTCAACCATATGGTGTTCATTAAGGATGTGCTGATAAATGGCAAGTCGCGCTTTGCCGAATTGCTTGATGGTGTGGCGTCAGGGCAGTTAAAAGCGTCCTCTGTAAAAAATATTTTCGATCTGCCATTTAGTGAGGGCTTAATTCGTTCGTTGAATCTGCTGCCATGTTCTTATCTGCTGTATTACTTCAAGCAGAAAGAGATGCTGGCTATTGAAATGGGCGAATACTACAAAGGCGGCGCACGAGCGCAGGTAGTACAGAAAGTCGAGAAACAACTTTTTGAGCTGTATAAAAATCCTGAGCTGAAAGTTAAGCCGAAAGAACTGGAACAGCGCGGTGGGGCTTATTACTCTGATGCAGCATGCGAAGTGATCAACGCTATCTACAACGACAAGCAAGCAGAACATTACGTTAATATCCCGCATCATGGGCAGATTGATAATATTCCGGCAGACTGGGCAGTAGAAATGACCTGTAAGCTGGGGCGCGATGGCGCGACGCCACATCCGCGCATTACGCATTTCGATGATAAAGTAATGGGGCTGATTCACACCATTAAAGGCTTCGAGATTGCTGCCAGTAACGCCGCACTTAGCGGAGAATTTAACGATGTGTTACTGGCGCTAAACCTTAGTCCGTTGGTGCATTCCGATCGCGATGCTGAGCTGCTGGCACGCGAGATGATTCTGGCGCACGAGAAATGGCTGCCAAACTTTGCCGACTGCATCGCAGAGCTTAAAAAAGCACATTAA", - "dna_sequence_length": 1353, - "functions": [ - "phospho-chitobiase", - "general 6-phospho-beta-glucosidase activity" - ], - "id": "CDS_1723", - "location": [ - [ - "NC_000913", - 1818500, - "-", - 1353 - ] - ], - "md5": "3be123bf42e4a221093df06dea635d23", - "parent_gene": "", - "protein_md5": "f1d1347632f282df4eb68fc0a37c4911", - "protein_translation": "MSQKLKVVTIGGGSSYTPELLEGFIKRYHELPVSELWLVDVEGGKPKLDIIFDLCQRMIDNAGVPMKLYKTLDRREALKDADFVTTQLRVGQLPARELDERIPLSHGYLGQETNGAGGLFKGLRTIPVIFDIVKDVEELCPNAWVINFTNPAGMVTEAVYRHTGFKRFIGVCNIPIGMKMFIRDVLMLKDSDDLSIDLFGLNHMVFIKDVLINGKSRFAELLDGVASGQLKASSVKNIFDLPFSEGLIRSLNLLPCSYLLYYFKQKEMLAIEMGEYYKGGARAQVVQKVEKQLFELYKNPELKVKPKELEQRGGAYYSDAACEVINAIYNDKQAEHYVNIPHHGQIDNIPADWAVEMTCKLGRDGATPHPRITHFDDKVMGLIHTIKGFEIAASNAALSGEFNDVLLALNLSPLVHSDRDAELLAREMILAHEKWLPNFADCIAELKKAH", - "protein_translation_length": 450, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005790" - ], - [ - "gene_synonym", - "JW1724" - ], - [ - "gene_synonym", - "GeneID:946247" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17410" - ], - [ - "gene_synonym", - "chbR" - ], - [ - "gene_synonym", - "EcoGene:EG10143" - ], - [ - "gene_synonym", - "celD" - ], - [ - "gene_synonym", - "ECK1733" - ], - [ - "gene_synonym", - "b1735" - ], - [ - "gene_synonym", - "GI:16129689" - ], - [ - "gene_synonym", - "NP_416249.1" - ] - ], - "dna_sequence": "ATGATGCAGCCAGTGATTAACGCGCCGGAAATTGCCACTGCCCGAGAACAGCAGTTGTTTAATGGCAAAAACTTCCATGTGTTTATCTATAACAAAACTGAGAGTATCAGCGGACTGCATCAGCACGACTATTATGAATTTACTCTGGTATTAACCGGGCGTTATTTCCAGGAGATTAACGGTAAGCGCGTGTTACTGGAACGGGGCGATTTTGTTTTTATTCCGTTAGGTTCGCACCATCAAAGTTTTTATGAGTTTGGTGCCACGCGCATATTGAACGTTGGGATCAGTAAACGCTTTTTTGAGCAGCATTACCTGCCATTGTTGCCTTATTGCTTTGTCGCTTCGCAGGTATACCGGACCAATAACGCTTTTCTCACCTATGTGGAAACAGTGATTTCTTCATTGAATTTCCGCGAAACAGGGCTGGAAGAGTTTGTTGAGATGGTTACTTTTTATGTCATTAACCGTTTACGTCATTACCGCGAAGAACAGGTGATTGATGATGTACCGCAGTGGCTGAAAAGTACGGTAGAAAAGATGCATGATAAAGAGCAGTTTAGTGAATCGGCGCTGGAGAATATGGTGGCGTTGTCAGCCAAATCACAGGAATATTTGACGCGAGCGACTCAACGATATTATGGCAAAACGCCAATGCAGATTATTAATGAAATCCGTATTAATTTTGCCAAAAAACAACTGGAAATGACCAACTATTCAGTGACGGATATTGCGTTTGAGGCCGGTTATAGTAGCCCGAGTTTGTTTATTAAAACGTTTAAGAAATTAACGTCCTTTACGCCTAAGAGCTATCGTAAGAAATTGACTGAATTTAATCAGTAA", - "dna_sequence_length": 843, - "functions": [ - "repressor of chb operon for N,N'-diacetylchitobiose utilization" - ], - "id": "CDS_1724", - "location": [ - [ - "NC_000913", - 1819447, - "-", - 843 - ] - ], - "md5": "278ef93eed0bdb351ba6d38e5a9190fb", - "parent_gene": "", - "protein_md5": "d8d0320c909ab4012575b41505f8932d", - "protein_translation": "MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ", - "protein_translation_length": 280, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005792" - ], - [ - "gene_synonym", - "chbA" - ], - [ - "gene_synonym", - "JW1725" - ], - [ - "gene_synonym", - "EcoGene:EG10142" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69791" - ], - [ - "gene_synonym", - "GeneID:946244" - ], - [ - "gene_synonym", - "GI:16129690" - ], - [ - "gene_synonym", - "celC" - ], - [ - "gene_synonym", - "b1736" - ], - [ - "gene_synonym", - "ECK1734" - ], - [ - "gene_synonym", - "NP_416250.1" - ] - ], - "dna_sequence": "ATGATGGATCTCGATAACATTCCCGATACGCAAACGGAAGCTGAAGAGCTGGAAGAAGTGGTGATGGGGCTGATCATCAACTCCGGACAAGCGCGCAGCCTGGCGTATGCGGCACTGAAACAGGCGAAGCAGGGCGATTTTGCCGCAGCAAAAGCCATGATGGATCAGTCACGGATGGCATTGAATGAAGCGCATCTGGTACAGACGAAACTGATTGAAGGCGATGCGGGCGAAGGTAAGATGAAAGTGAGTCTGGTGCTGGTCCACGCTCAGGATCATTTAATGACGTCCATGCTTGCGCGTGAACTGATTACTGAATTAATTGAGCTTCATGAAAAACTGAAGGCATAA", - "dna_sequence_length": 351, - "functions": [ - "N,N'-diacetylchitobiose-specific enzyme IIA component of PTS" - ], - "id": "CDS_1725", - "location": [ - [ - "NC_000913", - 1819805, - "-", - 351 - ] - ], - "md5": "5ba14c77e02b3aac21ab3bb5d3cb293c", - "parent_gene": "", - "protein_md5": "a0de2a6a74b4128dddc5bc89c77b6413", - "protein_translation": "MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAKQGDFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGKMKVSLVLVHAQDHLMTSMLARELITELIELHEKLKA", - "protein_translation_length": 116, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005795" - ], - [ - "gene_synonym", - "chbC" - ], - [ - "gene_synonym", - "JW1726" - ], - [ - "gene_synonym", - "GeneID:945982" - ], - [ - "gene_synonym", - "NP_416251.1" - ], - [ - "gene_synonym", - "EcoGene:EG10141" - ], - [ - "gene_synonym", - "GI:16129691" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17334" - ], - [ - "gene_synonym", - "ECK1735" - ], - [ - "gene_synonym", - "b1737" - ], - [ - "gene_synonym", - "celB" - ] - ], - "dna_sequence": "ATGAGTAATGTTATTGCATCGCTTGAAAAGGTACTCCTCCCTTTTGCAGTTAAAATAGGAAAGCAGCCACACGTTAATGCAATCAAAAATGGCTTTATTCGCTTAATGCCGTTAACCCTTGCGGGGGCCATGTTTGTATTAATTAACAACGTTTTTCTAAGCTTTGGGGAGGGGTCGTTTTTTTATTCCTTAGGTATTCGCCTCGACGCCTCAACCATTGAAACACTTAATGGTCTGAAAGGTATTGGCGGCAACGTATATAACGGAACATTAGGAATAATGTCTTTAATGGCACCGTTCTTTATTGGCATGGCGCTGGCAGAAGAGCGTAAAGTCGATGCGCTGGCGGCTGGGTTGTTATCCGTTGCAGCATTTATGACCGTCACCCCATATAGTGTCGGTGAGGCCTATGCGGTTGGTGCAAACTGGTTAGGTGGGGCGAATATCATCTCCGGGATTATTATTGGCCTGGTGGTGGCAGAAATGTTTACCTTTATTGTCCGCCGCAATTGGGTCATTAAACTGCCCGACAGCGTACCTGCTTCAGTATCGCGTTCCTTCTCGGCATTAATTCCCGGCTTTATTATTCTTTCCGTGATGGGGATTATTGCCTGGGCGTTGAATACCTGGGGCACCAACTTCCATCAGATCATTATGGATACCATCTCAACCCCACTGGCATCGTTGGGTAGCGTGGTGGGCTGGGCCTATGTGATCTTTGTTCCACTGCTCTGGTTCTTCGGTATTCATGGCGCGCTGGCGCTGACCGCACTGGACAACGGCATTATGACGCCGTGGGCACTGGAAAATATCGCGACCTATCAGCAATATGGTTCCGTCGAAGCGGCGCTGGCAGCCGGTAAGACCTTCCATATCTGGGCCAAGCCGATGCTGGACTCCTTTATTTTCCTTGGGGGCAGTGGTGCGACTTTAGGCCTGATCCTGGCTATCTTTATCGCCTCTCGCCGTGCTGATTATCGTCAGGTGGCAAAACTGGCGCTGCCGTCCGGCATCTTCCAGATTAACGAACCGATTCTGTTTGGTCTGCCAATTATCATGAACCCGGTGATGTTTATCCCGTTTGTACTGGTACAACCGATTCTGGCGGCAATCACCCTCGCAGCGTACTACATGGGCATTATTCCTCCGGTGACCAATATTGCACCGTGGACCATGCCAACCGGTCTGGGAGCCTTCTTTAACACCAACGGTAGCGTCGCCGCATTGCTGGTCGCACTCTTCAACCTTGGCATCGCAACGTTAATTTATCTGCCCTTTGTTGTGGTGGCTAACAAAGCACAAAATGCGATTGATAAAGAAGAGAGCGAAGAAGATATCGCTAACGCCCTGAAATTTTAA", 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"GeneID:945339" - ], - [ - "gene_synonym", - "JW1727" - ], - [ - "gene_synonym", - "EcoGene:EG10140" - ], - [ - "gene_synonym", - "NP_416252.1" - ], - [ - "gene_synonym", - "b1738" - ], - [ - "gene_synonym", - "GI:16129692" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69795" - ], - [ - "gene_synonym", - "celA" - ], - [ - "gene_synonym", - "ECK1736" - ] - ], - "dna_sequence": "ATGGAAAAGAAACACATTTATCTGTTTTGTTCTGCGGGCATGTCTACCTCTTTACTGGTATCAAAAATGCGCGCACAGGCAGAAAAATATGAAGTTCCGGTCATTATTGAAGCATTTCCGGAAACACTGGCTGGTGAAAAAGGTCAGAATGCCGATGTCGTGTTATTAGGGCCGCAGATTGCTTATATGTTGCCCGAAATCCAGCGTTTGTTACCCAACAAACCGGTTGAAGTAATTGACTCGCTGCTTTATGGCAAAGTCGATGGTTTAGGCGTGCTTAAGGCTGCGGTTGCAGCGATTAAAAAAGCCGCAGCAAATTAA", - "dna_sequence_length": 321, - "functions": [ - "N,N'-diacetylchitobiose-specific enzyme IIB component of PTS" - ], - "id": "CDS_1727", - "location": [ - [ - "NC_000913", - 1821619, - "-", - 321 - ] - ], - "md5": "d94d820aab3503d6ccc6c0d34a749845", - "parent_gene": "", - "protein_md5": "e50988174a047faa057f9a6d0fa0d53b", - "protein_translation": "MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKKAAAN", - "protein_translation_length": 106, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416253.1" - ], - [ - "gene_synonym", - "EcoGene:EG10044" - ], - [ - "gene_synonym", - "osmE" - ], - [ - "gene_synonym", - "JW1728" - ], - [ - "gene_synonym", - "ASAP:ABE-0005799" - ], - [ - "gene_synonym", - "b1739" - ], - [ - "gene_synonym", - "GI:16129693" - ], - [ - "gene_synonym", - "anr" - ], - [ - "gene_synonym", - "GeneID:945305" - ], - [ - "gene_synonym", - "ECK1737" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADB1" - ] - ], - "dna_sequence": "ATGAACAAGAATATGGCAGGAATTCTGAGTGCAGCGGCGGTATTAACCATGCTGGCGGGTTGTACGGCTTATGATCGTACCAAAGACCAGTTTGTACAGCCTGTGGTGAAAGACGTCAAAAAAGGCATGAGCCGGGCGCAGGTTGCACAAATTGCGGGTAAACCTTCGTCTGAAGTGAGCATGATCCATGCTCGCGGTACTTGCCAGACCTACATCCTGGGTCAACGTGATGGTAAAGCAGAAACCTACTTTGTCGCGTTAGATGATACCGGACATGTCATCAACTCCGGTTATCAGACCTGTGCTGAATACGACACTGATCCACAGGCTGCGAAGTAA", - "dna_sequence_length": 339, - "functions": [ - "osmotically-inducible lipoprotein" - ], - "id": "CDS_1728", - "location": [ - [ - "NC_000913", - 1822256, - "-", - 339 - ] - ], - "md5": "77d48f2c4703ea6bbc3d62724edcf708", - "parent_gene": "", - "protein_md5": "80ee582081650fc1058f330ea6212f00", - "protein_translation": "MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMSRAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCAEYDTDPQAAK", - "protein_translation_length": 112, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946946" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P18843" - ], - [ - "gene_synonym", - "JW1729" - ], - [ - "gene_synonym", - "EcoGene:EG10663" - ], - [ - "gene_synonym", - "nadE" - ], - [ - "gene_synonym", - "ntrL" - ], - [ - "gene_synonym", - "ECK1738" - ], - [ - "gene_synonym", - "b1740" - ], - [ - "gene_synonym", - "ASAP:ABE-0005803" - ], - [ - "gene_synonym", - "GI:16129694" - ], - [ - "gene_synonym", - "NP_416254.1" - ], - [ - "gene_synonym", - "efg" - ] - ], - "dna_sequence": "ATGACATTGCAACAACAAATAATAAAGGCGCTGGGCGCAAAACCGCAGATTAATGCTGAAGAGGAAATTCGTCGTAGTGTCGATTTTCTGAAAAGCTACCTGCAAACTTATCCGTTCATTAAATCACTGGTGCTCGGGATCAGCGGCGGTCAGGACTCCACGCTTGCCGGAAAGCTGTGCCAGATGGCGATTAATGAGCTGCGCCTGGAAACCGGCAACGAATCACTGCAATTTATTGCCGTACGCCTGCCCTATGGTGTTCAGGCCGACGAACAAGATTGCCAGGATGCCATTGCCTTTATTCAACCGGATCGCGTATTAACCGTTAATATCAAGGGCGCGGTATTGGCCAGCGAACAGGCATTGCGGGAAGCAGGCATTGAACTGAGCGATTTTGTCCGTGGCAATGAAAAAGCGCGTGAGCGGATGAAAGCACAATATAGCATTGCGGGTATGACCAGCGGTGTCGTGGTGGGCACCGATCATGCAGCAGAAGCCATTACCGGATTCTTCACTAAATATGGTGACGGCGGTACGGACATTAATCCGCTGTATCGTCTCAACAAACGTCAGGGTAAACAGTTACTGGCGGCATTAGCTTGCCCGGAACACCTTTATAAGAAAGCGCCAACGGCCGATCTGGAAGATGATCGCCCTTCTCTGCCAGATGAAGTGGCACTCGGCGTGACCTATGACAATATCGACGACTATCTGGAAGGGAAAAACGTACCTCAACAGGTCGCCAGAACAATAGAGAACTGGTATCTGAAAACCGAACATAAACGCCGTCCGCCAATTACCGTTTTCGATGATTTCTGGAAAAAGTAA", - "dna_sequence_length": 828, - "functions": [ - "NAD synthetase, NH3/glutamine-dependent" - ], - "id": "CDS_1729", - "location": [ - [ - "NC_000913", - 1822458, - "+", - 828 - ] - ], - "md5": "baab79ac589578e705939d245d5c8cf2", - "parent_gene": "", - "protein_md5": "ea37cb76b651f90db9b8d4dbf6861145", - "protein_translation": "MTLQQQIIKALGAKPQINAEEEIRRSVDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQLLAALACPEHLYKKAPTADLEDDRPSLPDEVALGVTYDNIDDYLEGKNVPQQVARTIENWYLKTEHKRRPPITVFDDFWKK", - "protein_translation_length": 275, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ydjQ" - ], - [ - "gene_synonym", - "GeneID:948996" - ], - [ - "gene_synonym", - "dinM" - ], - [ - "gene_synonym", - "GI:16129695" - ], - [ - "gene_synonym", - "JW1730" - ], - [ - "gene_synonym", - "cho" - ], - [ - "gene_synonym", - "ECK1739" - ], - [ - "gene_synonym", - "b1741" - ], - [ - "gene_synonym", - "sosD" - ], - [ - "gene_synonym", - "EcoGene:EG13993" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76213" - ], - [ - "gene_synonym", - "ASAP:ABE-0005807" - ], - [ - "gene_synonym", - "NP_416255.1" - ] - ], - "dna_sequence": "GTGGTACGGCGTTTAACTTCTCCGCGGCTCGAATTTGAAGCTGCGGCAATTTATGAATATCCCGAACATTTACGTTCATTCCTTAATGACTTACCCACCCGACCAGGGGTGTATCTGTTTCATGGTGAAAGTGACACCATGCCGCTCTATATCGGCAAAAGCGTTAACATCCGCAGCCGCGTCCTTTCTCATTTACGTACCCCGGATGAAGCCGCCATGCTACGGCAATCCCGACGGATCAGCTGGATATGTACCGCCGGTGAAATCGGCGCTCTGCTCCTTGAAGCGCGATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGGTGTATGCCAAAGAGGTGGATTTTTCACGAGCCCCCAACCTGTTTGGCCTGTTTGCCAATAGGCGCGCAGCTTTGCAAGCATTGCAGACCATCGCTGATGAACAAAAACTTTGTTATGGCCTGCTGGGACTGGAACCGTTAAGTCGCGGTCGTGCATGTTTTCGTTCAGCGCTAAAACGTTGCGCCGGAGCATGCTGCGGTAAAGAGAGCCATGAGGAACATGCGCTACGCTTGCGCCAGTCTCTGGAGCGTTTGCGGGTGGTGTGTTGGCCTTGGCAAGGGGCGGTGGCGCTGAAAGAACAGCACCCGGAAATGACTCAATATCATATTATTCAAAACTGGCTGTGGCTGGGGGCGGTTAATTCGCTGGAAGAAGCGACAACGTTAATTCGGACACCCGCCGGGTTTGATCACGACGGTTATAAAATTCTTTGTAAGCCGCTGCTTTCCGGTAACTATGAAATTACTGAACTTGATCCGGCGAATGACCAGCGAGCCAGTTGA", - 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"gene_synonym", - "b1742" - ], - [ - "gene_synonym", - "ASAP:ABE-0005809" - ], - [ - "gene_synonym", - "EcoGene:EG13994" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76214" - ] - ], - "dna_sequence": "ATGGAATACTTTGATATGCGTAAAATGTCGGTGAATCTGTGGCGAAATGCTGCCGGTGAAACGCGCGAAATTTGCACGTTCCCACCGGCAAAACGTGATTTTTACTGGCGTGCCAGCATTGCATCCATCGCGGCGAATGGGGAGTTTTCTTTGTTTCCCGGCATGGAAAGGATAGTGACGTTGCTGGAAGGCGGCGAGATGCTCCTTGAAAGCGCAGACCGCTTTAACCATACCTTAAAACCGTTCCAGCCTTTTGCCTTTGCAGCGGACCAGGTGGTAAAAGCGAAACTGACGGCAGGGCAGATGTCGATGGATTTCAACATCATGACACGCCTGGATGTCTGTAAGGCGAAAGTCAGAATTGCCGAACGTACGTTTACTACCTTTGGCTCACGCGGCGGGGTGGTGTTTGTGATTAACGGGGCGTGGCAACTGGGCGATAAATTGCTCACTACCGACCAGGGCGCGTGCTGGTTCGATGGCAGGCACACCCTGCGGCTTTTACAACCGCAAGGTAAACTGTTGTTCAGTGAAATCAACTGGCTCGCTGGTCATTCGCCGGATCAAGTTCAGTAA", - "dna_sequence_length": 576, - "functions": [ - "cold- and stress-inducible protein" - ], - "id": "CDS_1731", - "location": [ - [ - "NC_000913", - 1824937, - "-", - 576 - ] - ], - "md5": "14825e70563be971ce4a08965a7ab758", - "parent_gene": "", - "protein_md5": "cf041ac51fd87adcd5c8f2a87e24742f", - "protein_translation": "MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIAANGEFSLFPGMERIVTLLEGGEMLLESADRFNHTLKPFQPFAFAADQVVKAKLTAGQMSMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVINGAWQLGDKLLTTDQGACWFDGRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ", - "protein_translation_length": 191, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129697" - ], - [ - "gene_synonym", - "spy" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77754" - ], - [ - "gene_synonym", - "ECK1741" - ], - [ - "gene_synonym", - "JW1732" - ], - [ - "gene_synonym", - "NP_416257.1" - ], - [ - "gene_synonym", - "GeneID:946253" - ], - [ - "gene_synonym", - "b1743" - ], - [ - "gene_synonym", - "ASAP:ABE-0005812" - ], - [ - "gene_synonym", - "EcoGene:EG13490" - ] - ], - "dna_sequence": "ATGCGTAAATTAACTGCACTGTTTGTTGCCTCTACCCTGGCTCTTGGCGCGGCTAACCTGGCCCATGCCGCAGACACCACTACCGCAGCACCGGCTGACGCGAAGCCGATGATGCACCACAAAGGCAAGTTCGGTCCGCATCAGGACATGATGTTCAAAGACCTGAACCTGACCGACGCGCAGAAACAGCAGATCCGCGAAATCATGAAAGGCCAGCGTGACCAGATGAAACGTCCGCCGCTGGAAGAACGCCGCGCAATGCATGACATCATTGCCAGCGATACCTTCGATAAAGTAAAAGCTGAAGCGCAGATCGCAAAAATGGAAGAACAGCGCAAAGCTAACATGCTGGCGCACATGGAAACCCAGAACAAAATTTACAACATCCTGACGCCGGAACAGAAAAAGCAATTTAATGCTAATTTTGAGAAGCGTCTGACAGAACGTCCAGCGGCAAAAGGTAAAATGCCTGCAACTGCTGAATAA", - "dna_sequence_length": 486, - "functions": [ - "periplasmic ATP-independent protein refolding chaperone, stress-induced" - ], - "id": "CDS_1732", - "location": [ - [ - "NC_000913", - 1825625, - "-", - 486 - ] - ], - "md5": "e800179631beb7c09d19c5bd9fe16bbd", - "parent_gene": "", - "protein_md5": "3053db65ad689963a9ed3c8eb81b43dd", - "protein_translation": "MRKLTALFVASTLALGAANLAHAADTTTAAPADAKPMMHHKGKFGPHQDMMFKDLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIASDTFDKVKAEAQIAKMEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATAE", - "protein_translation_length": 161, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1742" - ], - [ - "gene_synonym", - "NP_416258.1" - ], - [ - "gene_synonym", - "JW1733" - ], - [ - "gene_synonym", - "astE" - ], - [ - "gene_synonym", - "EcoGene:EG13995" - ], - [ - "gene_synonym", - "ydjS" - ], - [ - "gene_synonym", - "GeneID:946256" - ], - [ - "gene_synonym", - "b1744" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76215" - ], - [ - "gene_synonym", - "ASAP:ABE-0005815" - ], - [ - "gene_synonym", - "GI:16129698" - ] - ], - "dna_sequence": "ATGGATAATTTTCTTGCTCTGACCTTAACGGGTAAAAAACCGGTTATCACCGAGCGAGAAATCAACGGCGTTCGCTGGCGCTGGCTGGGCGATGGTGTGCTGGAACTGACGCCATTAACGCCACCGCAAGGCGCACTGGTGATTTCAGCGGGAATACACGGTAATGAGACGGCACCTGTGGAGATGCTGGACGCGTTGCTTGGCGCGATATCTCACGGCGAGATCCCGTTACGTTGGCGGTTGCTGGTGATCCTCGGGAATCCTCCTGCGCTGAAGCAAGGGAAACGTTATTGCCATAGCGATATGAATCGAATGTTTGGCGGTCGTTGGCAGCTATTTGCTGAAAGCGGAGAAACCTGTCGGGCGCGCGAACTGGAACAGTGCCTGGAAGATTTTTATGACCAGGGCAAAGAATCTGTGCGCTGGCACCTTGATCTACATACCGCAATTCGTGGCTCCTTGCATCCGCAGTTCGGTGTATTACCGCAACGCGACATTCCCTGGGACGAGAAATTTCTGACGTGGCTGGGTGCGGCGGGGCTGGAGGCGCTGGTGTTCCATCAGGAACCTGGTGGTACGTTTACCCATTTCAGCGCCAGACATTTTGGCGCGCTGGCCTGTACGCTGGAACTTGGCAAAGCGTTGCCCTTTGGGCAAAACGATCTTCGCCAGTTTGCAGTAACTGCCAGCGCAATTGCTGCGCTGCTATCTGGTGAGAGTGTCGGTATCGTGAGAACACCGCCGCTCCGTTATCGGGTGGTTTCGCAAATTACTCGCCACTCGCCGTCCTTCGAAATGCATATGGCAAGTGACACGCTGAATTTTATGCCGTTTGAGAAAGGAACATTGCTGGCGCAGGACGGAGAGGAACGTTTTACCGTAACCCATGATGTAGAGTATGTGTTATTCCCTAATCCGTTGGTAGCGTTGGGATTACGCGCGGGATTAATGCTCGAAAAAATAAGCTAA", - "dna_sequence_length": 969, - "functions": [ - "succinylglutamate desuccinylase" - ], - "id": "CDS_1733", - "location": [ - [ - "NC_000913", - 1826923, - "-", - 969 - ] - ], - "md5": "4fee0e37e763c02bfa1f288dd2bd5542", - "parent_gene": "", - "protein_md5": "40238e118d2cf8c8336ac5ef71cb2ea7", - "protein_translation": "MDNFLALTLTGKKPVITEREINGVRWRWLGDGVLELTPLTPPQGALVISAGIHGNETAPVEMLDALLGAISHGEIPLRWRLLVILGNPPALKQGKRYCHSDMNRMFGGRWQLFAESGETCRARELEQCLEDFYDQGKESVRWHLDLHTAIRGSLHPQFGVLPQRDIPWDEKFLTWLGAAGLEALVFHQEPGGTFTHFSARHFGALACTLELGKALPFGQNDLRQFAVTASAIAALLSGESVGIVRTPPLRYRVVSQITRHSPSFEMHMASDTLNFMPFEKGTLLAQDGEERFTVTHDVEYVLFPNPLVALGLRAGLMLEKIS", - "protein_translation_length": 322, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1743" - ], - [ - "gene_synonym", - "ydjT" - ], - [ - "gene_synonym", - "GeneID:946259" - ], - [ - "gene_synonym", - "astB" - ], - [ - "gene_synonym", - "EcoGene:EG13996" - ], - [ - "gene_synonym", - "b1745" - ], - [ - "gene_synonym", - "NP_416259.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76216" - ], - [ - "gene_synonym", - "JW1734" - ], - [ - "gene_synonym", - "GI:16129699" - ], - [ - "gene_synonym", - "ASAP:ABE-0005817" - ] - ], - "dna_sequence": "ATGAACGCCTGGGAAGTCAATTTCGACGGGCTGGTAGGGCTGACGCATCATTACGCGGGCCTGTCGTTTGGTAATGAAGCCTCTACCCGTCACCGTTTTCAGGTGTCTAACCCGCGACTGGCGGCGAAGCAGGGCTTACTGAAAATGAAAGCCCTTGCCGATGCGGGATTCCCCCAGGCCGTGATCCCGCCGCACGAGCGTCCGTTTATTCCGGTGCTGCGTCAGTTGGGATTCAGTGGTAGCGATGAGCAGGTACTGGAAAAAGTTGCACGCCAGGCACCGCACTGGCTTTCCAGCGTCAGTTCCGCTTCGCCAATGTGGGTAGCCAATGCGGCAACGATCGCGCCATCTGCCGATACGCTGGATGGCAAAGTGCATCTCACCGTTGCCAACCTGAACAATAAATTTCACCGTTCGCTGGAAGCGCCCGTCACTGAATCGCTGTTAAAAGCGATTTTTAACGACGAAGAGAAATTTAGCGTCCATTCGGCGTTGCCACAGGTAGCGTTGCTCGGTGATGAGGGGGCGGCAAACCACAATCGTCTCGGCGGTCATTACGGTGAACCGGGTATGCAACTTTTTGTCTACGGGCGAGAAGAAGGCAATGATACCCGGCCTTCCCGTTATCCGGCGCGACAGACTCGCGAAGCCAGCGAGGCGGTGGCAAGGCTGAATCAGGTGAATCCCCAACAGGTGATTTTCGCCCAGCAAAACCCGGACGTTATCGACCAGGGCGTTTTTCATAATGACGTGATTGCCGTGAGTAACCGCCAGGTGCTGTTTTGCCACCAACAGGCGTTCGCTCGCCAGTCACAGTTACTGGCAAACCTGCGTGCGCGGGTCAATGGTTTTATGGCGATAGAAGTTCCGGCAACTCAGGTTTCCGTGTCTGATACGGTGTCTACCTATCTGTTTAACAGCCAACTGCTGAGCCGCGATGATGGTTCCATGATGTTGGTGCTGCCTCAGGAGTGTCGGGAACACGCCGGAGTATGGGGTTATCTCAATGAACTCCTTGCCGCTGACAACCCGATTAGCGAACTAAAAGTCTTTGATTTACGTGAAAGCATGGCGAATGGCGGCGGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGAACGATACGCTGTTTAATGCGCTCAATGACTGGGTGGATCGTTACTACCGCGATCGCCTTACTGCTGCCGATCTGGCCGACCCGCAATTGCTGCGCGAAGGGCGGGAAGCACTGGATGTATTGAGCCAATTACTGAATCTCGGTTCGGTTTATCCGTTCCAGCGCGAGGGAGGGGGCAATGGATAA", 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"astD" - ], - [ - "gene_synonym", - "EcoGene:EG13997" - ], - [ - "gene_synonym", - "ydjU" - ], - [ - "gene_synonym", - "b1746" - ], - [ - "gene_synonym", - "GeneID:946260" - ], - [ - "gene_synonym", - "ECK1744" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76217" - ], - [ - "gene_synonym", - "NP_416260.1" - ] - ], - "dna_sequence": "ATGACTTTATGGATTAACGGTGACTGGATAACGGGCCAGGGCGCATCGCGTGTGAAGCGTAATCCGGTATCGGGCGAGGTGTTATGGCAAGGCAATGATGCCGATGCCGCTCAGGTCGAGCAGGCTTGTCGGGCAGCCCGTGCGGCGTTTCCGCGCTGGGCGCGGCTTTCATTTGCTGAACGTCATGCCGTTGTCGAACGCTTTGCCGCACTGCTGGAAAGCAATAAAGCCGAATTAACCGCGATTATTGCCAGAGAAACGGGTAAGCCGCGCTGGGAAGCGGCAACCGAAGTGACGGCGATGATCAATAAAATCGCGATATCAATTAAGGCGTATCACGTTCGTACCGGCGAGCAGCGTAGTGAAATGCCGGACGGCGCGGCGAGCCTGCGACATCGCCCGCACGGCGTGCTGGCGGTGTTTGGGCCGTATAATTTCCCTGGTCATTTGCCGAACGGACATATCGTTCCGGCATTGCTGGCAGGTAACACCATTATCTTTAAACCCAGCGAACTGACACCGTGGAGTGGCGAAGCGGTAATGCGTTTATGGCAGCAGGCTGGCTTGCCGCCAGGCGTGCTGAACCTGGTGCAGGGCGGGCGTGAAACGGGTCAGGCGCTGAGTGCGCTGGAGGATCTCGACGGTTTGCTGTTTACCGGTAGCGCCAATACAGGCTACCAGTTGCATCGCCAGCTCTCCGGTCAGCCGGAGAAAATTCTCGCCCTTGAGATGGGCGGTAATAATCCGCTAATTATCGATGAGGTGGCGGATATCGACGCGGCTGTCCATCTGACCATTCAGTCGGCGTTTGTCACAGCCGGTCAACGCTGCACCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGCCAGCGATTAACGCCGGGCAACTGGGATGACGAACCGCAGCCGTTTATTGGCGGGCTGATTTCTGAACAGGCCGCACAGCAGGTGGTTACTGCATGGCAGCAACTGGAAGCGATGGGCGGACGACCCCTGCTTGCGCCGCGCTTATTACAAGCAGGGACATCGTTGCTGACGCCGGGGATCATTGAAATGACAGGCGTTGCTGGCGTACCAGATGAAGAGGTGTTCGGACCGTTATTGCGCGTCTGGCGTTATGATACTTTCGATGAAGCGATTCGAATGGCGAATAACACTCGCTTCGGACTCTCTTGCGGTCTGGTTTCCCCCGAGCGGGAAAAGTTCGATCAACTGTTGCTGGAGGCGCGGGCGGGGATTGTTAACTGGAACAAACCGCTTACCGGTGCTGCCAGTACCGCGCCATTCGGCGGCATTGGTGCTTCCGGTAACCATCGCCCCAGCGCCTGGTATGCCGCAGATTACTGCGCATGGCCGATGGCGAGCCTGGAGTCGGACTCGTTAACATTGCCCGCCACGCTTAACCCCGGGCTGGATTTTTCCGATGAGGTGGTGCGATGA", 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[ - "gene_synonym", - "ECK1745" - ], - [ - "gene_synonym", - "ydjV" - ], - [ - "gene_synonym", - "JW1736" - ], - [ - "gene_synonym", - "astA" - ], - [ - "gene_synonym", - "GeneID:946261" - ], - [ - "gene_synonym", - "b1747" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE37" - ], - [ - "gene_synonym", - "NP_416261.1" - ], - [ - "gene_synonym", - "EcoGene:EG13998" - ] - ], - "dna_sequence": "ATGATGGTCATCCGTCCCGTTGAGCGATCAGATGTCTCGGCGCTGATGCAGCTTGCCAGCAAAACGGGCGGCGGCCTGACGTCGCTTCCCGCCAATGAAGCCACGCTTTCGGCGCGTATCGAAAGGGCAATCAAAACCTGGCAAGGCGAACTGCCCAAAAGTGAGCAGGGCTATGTGTTCGTGCTGGAAGATAGCGAGACAGGCACCGTGGCGGGGATTTGTGCCATTGAGGTGGCGGTTGGGCTGAACGATCCCTGGTACAACTATCGCGTCGGCACGTTGGTTCACGCCTCAAAAGAGCTGAATGTCTATAACGCATTGCCGACGCTGTTTCTCAGTAACGATCACACCGGCAGCAGCGAGCTGTGCACGCTGTTTCTCGACCCGGACTGGCGCAAAGAGGGCAACGGCTATTTGCTGTCGAAATCGCGCTTTATGTTTATGGCGGCTTTTCGCGACAAGTTTAATGACAAAGTGGTTGCTGAAATGCGCGGGGTGATTGACGAACACGGCTATTCACCGTTCTGGCAAAGCCTCGGTAAACGCTTCTTTTCGATGGATTTTAGCCGCGCCGATTTTCTCTGCGGCACCGGGCAAAAGGCATTTATTGCAGAACTGATGCCGAAACATCCGATCTATACCCACTTTTTATCCCAGGAAGCCCAGGACGTCATCGGTCAGGTACATCCGCAAACCGCGCCTGCCCGCGCGGTGCTGGAGAAAGAAGGTTTTCGCTACCGTAACTATATCGACATCTTTGACGGTGGGCCGACGCTTGAGTGTGACATCGACCGCGTGCGCGCCATCCGTAAAAGTCGGCTGGTGGAAGTGGCAGAAGGGCAGCCTGCGCAGGGCGATTTCCCAGCCTGCCTGGTCGCCAATGAAAATTATCACCATTTCCGCGTGGTGCTGGTGCGTACCGATCCGGCAACCGAGCGTTTGATTTTAACCGCCGCACAACTGGATGCCCTCAAATGCCACGCCGGGGATCGCGTTCGTCTGGTGCGCCTGTGCGCAGAGGAGAAAACAGCATGA", 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"UniProtKB/Swiss-Prot:P77581" - ], - [ - "gene_synonym", - "argM" - ], - [ - "gene_synonym", - "GeneID:946255" - ], - [ - "gene_synonym", - "JW1737" - ], - [ - "gene_synonym", - "b1748" - ], - [ - "gene_synonym", - "EcoGene:EG13999" - ], - [ - "gene_synonym", - "ASAP:ABE-0005824" - ] - ], - "dna_sequence": "ATGTCTCAGCCAATTACGCGTGAAAACTTTGATGAATGGATGATACCTGTTTACGCTCCGGCACCCTTTATACCGGTACGTGGCGAAGGTTCGCGCTTGTGGGATCAGCAGGGGAAAGAGTATATCGACTTCGCGGGTGGCATTGCGGTGAACGCGCTGGGCCATGCGCATCCGGAACTGCGTGAAGCGCTGAACGAACAGGCGAGTAAGTTCTGGCATACCGGCAACGGTTACACCAACGAGCCGGTACTGCGACTGGCGAAAAAATTGATCGACGCCACGTTTGCCGATCGCGTCTTCTTTTGTAACTCCGGTGCGGAAGCCAACGAAGCGGCGCTAAAACTGGCGCGTAAATTCGCTCACGACCGCTACGGCAGCCATAAGAGCGGCATCGTGGCGTTCAAAAATGCGTTTCATGGTCGCACGCTGTTTACTGTCAGTGCGGGTGGGCAGCCAGCCTATTCACAGGATTTTGCGCCACTGCCGGCGGATATTCGTCATGCTGCATATAACGATATTAACTCTGCCAGCGCGCTGATTGACGACTCTACCTGTGCGGTGATTGTCGAACCCATCCAGGGGGAAGGCGGTGTGGTGCCAGCCAGCAACGCGTTTTTACAAGGTCTGCGTGAATTGTGTAACCGCCACAATGCGCTGTTGATTTTTGATGAAGTACAAACCGGCGTCGGGCGCACCGGGGAACTGTATGCCTATATGCACTACGGCGTGACGCCTGATCTGTTAACTACCGCCAAAGCGCTGGGCGGCGGTTTCCCGGTCGGTGCGTTGTTGGCAACCGAAGAGTGCGCCCGCGTGATGACCGTTGGCACTCATGGCACCACCTATGGCGGTAATCCGCTGGCCTCGGCGGTGGCAGGCAAAGTGCTGGAGCTCATCAACACACCAGAGATGCTTAATGGCGTTAAACAGCGTCACGACTGGTTTGTTGAGCGTCTTAATACTATTAATCACCGCTATGGTTTGTTCAGTGAAGTTCGCGGCTTAGGTTTGCTGATTGGCTGTGTACTGAATGCCGATTACGCCGGGCAAGCGAAACAGATCTCTCAGGAAGCGGCGAAAGCAGGCGTGATGGTACTGATTGCGGGTGGCAACGTGGTGCGTTTTGCGCCTGCGCTCAATGTCAGCGAAGAAGAGGTGACGACCGGACTGGATCGCTTTGCAGCTGCTTGCGAACACTTTGTTAGCCGAGGTTCATCATGA", - "dna_sequence_length": 1221, - "functions": [ - "succinylornithine transaminase, PLP-dependent" - ], - "id": "CDS_1737", - "location": [ - [ - "NC_000913", - 1831982, - "-", - 1221 - ] - ], - "md5": "322996cc14b0603f1696874473099e75", - "parent_gene": "", - "protein_md5": "1b99953e089adb16509bf02085e6ee79", - "protein_translation": "MSQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGGFPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACEHFVSRGSS", - "protein_translation_length": 406, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129703" - ], - [ - "gene_synonym", - "JW1738" - ], - [ - "gene_synonym", - "ECK1747" - ], - [ - "gene_synonym", - "ASAP:ABE-0005829" - ], - [ - "gene_synonym", - "NP_416263.1" - ], - [ - "gene_synonym", - "xthA" - ], - [ - "gene_synonym", - "EcoGene:EG11073" - ], - [ - "gene_synonym", - "GeneID:946254" - ], - [ - "gene_synonym", - "b1749" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09030" - ], - [ - "gene_synonym", - "xth" - ] - ], - "dna_sequence": "ATGAAATTTGTCTCTTTTAATATCAACGGCCTGCGCGCCAGACCTCACCAGCTTGAAGCCATCGTCGAAAAGCACCAACCGGATGTGATTGGCCTGCAGGAGACAAAAGTTCATGACGATATGTTTCCGCTCGAAGAGGTGGCGAAGCTCGGCTACAACGTGTTTTATCACGGGCAGAAAGGCCATTATGGCGTGGCGCTGCTGACCAAAGAGACGCCGATTGCCGTGCGTCGCGGCTTTCCCGGTGACGACGAAGAGGCGCAGCGGCGGATTATTATGGCGGAAATCCCCTCACTGCTGGGTAATGTCACCGTGATCAACGGTTACTTCCCGCAGGGTGAAAGCCGCGACCATCCGATAAAATTCCCGGCAAAAGCGCAGTTTTATCAGAATCTGCAAAACTACCTGGAAACCGAACTCAAACGTGATAATCCGGTACTGATTATGGGCGATATGAATATCAGCCCTACAGATCTGGATATCGGCATTGGCGAAGAAAACCGTAAGCGCTGGCTGCGTACCGGTAAATGCTCTTTCCTGCCGGAAGAGCGCGAATGGATGGACAGGCTGATGAGCTGGGGGTTGGTCGATACCTTCCGCCATGCGAATCCGCAAACAGCAGATCGTTTCTCATGGTTTGATTACCGCTCAAAAGGTTTTGACGATAACCGTGGTCTGCGCATCGACCTGCTGCTCGCCAGCCAACCGCTGGCAGAATGTTGCGTAGAAACCGGCATCGACTATGAAATCCGCAGCATGGAAAAACCGTCCGATCACGCCCCCGTCTGGGCGACCTTCCGCCGCTAA", - "dna_sequence_length": 807, - "functions": [ - "exonuclease III" - ], - "id": "CDS_1738", - "location": [ - [ - "NC_000913", - 1832428, - "+", - 807 - ] - ], - "md5": "4ac742f68154e6d46d3fa9ceba61070d", - "parent_gene": "", - "protein_md5": "afb5765c5d4f554c52bed11f02153167", - "protein_translation": "MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFRR", - "protein_translation_length": 268, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14000" - ], - [ - "gene_synonym", - "GeneID:946250" - ], - [ - "gene_synonym", - "JW1739" - ], - [ - "gene_synonym", - "ECK1748" - ], - [ - "gene_synonym", - "ydjX" - ], - [ - "gene_synonym", - "GI:90111321" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76219" - ], - [ - "gene_synonym", - "ASAP:ABE-0005832" - ], - [ - "gene_synonym", - "NP_416264.4" - ], - [ - "gene_synonym", - "b1750" - ] - ], - "dna_sequence": "ATGAACGCTGAGCGTAAATTTCTTTTTGCCTGTCTTATTTTTGCGCTGGTCATTTACGCTATCCACGCTTTCGGTTTATTCGATCTGCTCACCGATTTACCCCACTTACAGACACTCATCCGCCAGAGCGGATTTTTCGGCTATAGCCTCTATATTCTGTTATTCATCATTGCCACCCTCTTGCTGTTACCAGGAAGCATACTGGTGATCGCGGGAGGAATAGTTTTTGGCCCGCTCTTAGGGACACTACTCTCATTAATTGCCGCCACGCTGGCCTCCTCGTGCTCATTCCTGCTGGCGCGCTGGCTGGGACGTGATTTACTGCTGAAATACGTTGGCCATAGCAATACCTTCCAGGCCATTGAAAAAGGCATTGCGCGTAACGGTATTGATTTTCTTATTCTGACCCGCTTAATCCCGTTGTTTCCTTACAATATTCAAAATTACGCTTACGGATTAACCACAATCGCCTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTACCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGTCTGGCGGGCCTGGCGCTGTTTATTCTCGTCCAGCTCGCAAAACTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATAG", - "dna_sequence_length": 711, - "functions": [ - "TVP38/TMEM64 family inner membrane protein" - ], - "id": "CDS_1739", - "location": [ - [ - "NC_000913", - 1833401, - "+", - 711 - ] - ], - "md5": "db9a52835de75ca7691e5be633c9d90e", - "parent_gene": "", - "protein_md5": "05f3752d12267af8cdcca90e672ff82c", - "protein_translation": "MNAERKFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSGFFGYSLYILLFIIATLLLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARWLGRDLLLKYVGHSNTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALTTLPGIVIYTVMASDLANEGITLRFILQLCLAGLALFILVQLAKLYARHKHVDLSASRRSPLTHPKNEG", - "protein_translation_length": 236, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76220" - ], - [ - "gene_synonym", - "JW5283" - ], - [ - "gene_synonym", - "ydjY" - ], - [ - "gene_synonym", - "ECK1749" - ], - [ - "gene_synonym", - "GI:90111322" - ], - [ - "gene_synonym", - "ASAP:ABE-0005834" - ], - [ - "gene_synonym", - "GeneID:946248" - ], - [ - "gene_synonym", - "NP_416265.4" - ], - [ - "gene_synonym", - "b1751" - ], - [ - "gene_synonym", - "EcoGene:EG14001" - ] - ], - "dna_sequence": "ATGTTGCAACATTATTCAGTGTCATGGAAAAAAGGACTGGCTGCACTCTGTTTACTGGCTGTTGCTGGGCTTAGCGGCTGCGATCAACAAGAGAATGCGGCGGCAAAAGTGGAATACGACGGACTTTCGAACAGCCAACCGCTGCGTGTCGATGCCAATAACCATACGGTAACCATGCTGGTGCAAATTAATGGTCGTTTCCTCACCGACGACACTCGTCACGGTATTGTGTTTAAAGATGGCTCCAACGGACATAAATCGCTGTTTATGGGTTATGCGACCCCGAAAGCATTTTATGAAGCCCTGAAAGAGGCAGGTGGTACGCCGGGCGAAAACATGACGATGGATAATAAAGAAACGACTCATGTCACAGGCAGCAAACTGGATATTTCGGTCAACTGGCAAGGGGCGGCAAAAGCGTATTCCTTCGATGAAGTGATTGTTGACAGTAATGGCAAGAAACTGGACATGCGCTTTGGCGGTAATTTAACGGCAGCAGAAGAGAAGAAAACGGGTTGCCTGGTGTGTCTGGATAGCTGCCCGGTCGGCATCGTCAGCAATGCAACATACACTTATGGTGCGGTTGAAAAACGTGGTGAAGTTAAATTCAAAGGCAATGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCGCCGAATAA", - "dna_sequence_length": 678, - "functions": [ - "putative ferrodoxin-like lipoprotein" - ], - "id": "CDS_1740", - "location": [ - [ - "NC_000913", - 1834116, - "+", - 678 - ] - ], - "md5": "905e9b5612040fd5997bbf0a588eb314", - "parent_gene": "", - "protein_md5": "107d58b4f4d7b6c03385c527404cb005", - "protein_translation": "MLQHYSVSWKKGLAALCLLAVAGLSGCDQQENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKDGSNGHKSLFMGYATPKAFYEALKEAGGTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSCPVGIVSNATYTYGAVEKRGEVKFKGNASVLPADNTLATVTFKIAE", - "protein_translation_length": 225, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416266.1" - ], - [ - "gene_synonym", - "ECK1750" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76221" - ], - [ - "gene_synonym", - "EcoGene:EG14002" - ], - [ - "gene_synonym", - "ydjZ" - ], - [ - "gene_synonym", - "GI:16129706" - ], - [ - "gene_synonym", - "ASAP:ABE-0005837" - ], - [ - "gene_synonym", - "JW1741" - ], - [ - "gene_synonym", - "b1752" - ], - [ - "gene_synonym", - "GeneID:946269" - ] - ], - "dna_sequence": "ATGATGATGATGCAATCGCGAAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTATGCTGCTGGCATGGGCGCTGCTTCCCGGCGTCCATGAGTTTATCAATCGCAGCGTTGCGGCGTTTGCCGCCGTGGACCAACAGGGTATAGAACGCTTTATTCAGTCTTACGGCGCACTGGCGGCAGTTGTCTCGTTCTTGTTGATGATTTTGCAGGCCATTGCTGCACCGCTACCTGCGTTTTTGATCACCTTTGCCAATGCGTCGCTGTTTGGCGCGTTCTGGGGCGGCTTGCTGTCGTGGACCAGTTCGATGGCCGGCGCGGCGCTGTGCTTTTTTATCGCCAGAGTGATGGGCCGCGAAGTGGTGGAAAAATTAACCGGCAAAACCGTGCTTGACAGTATGGACGGCTTTTTCACTCGCTACGGCAAACACACCATTCTGGTCTGTCGGTTATTGCCTTTTGTCCCTTTCGATCCAATCAGCTATGCTGCCGGTTTGACTTCAATACGTTTTCGCTCGTTTTTTATCGCCACCGGGCTTGGTCAGTTACCGGCAACTATTGTTTATTCCTGGGCGGGCAGCATGTTAACAGGCGGTACTTTCTGGTTTGTCACCGGACTGTTTATTCTGTTTGCCCTGACCGTGGTGATTTTTATGGCGAAGAAAATATGGCTTGAACGCCAGAAGAGGAATGCCTGA", - "dna_sequence_length": 708, - "functions": [ - "TVP38/TMEM64 family inner membrane protein" - ], - "id": "CDS_1741", - "location": [ - [ - "NC_000913", - 1834808, - "+", - 708 - ] - ], - "md5": "4139c89c07d77edc072bcccdfa1bf50a", - "parent_gene": "", - "protein_md5": "f3a0de9cbf2215b2acf43cbdd96fbcd5", - "protein_translation": "MMMMQSRKIWYYRITLIILLFAMLLAWALLPGVHEFINRSVAAFAAVDQQGIERFIQSYGALAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLSWTSSMAGAALCFFIARVMGREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPFDPISYAAGLTSIRFRSFFIATGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTVVIFMAKKIWLERQKRNA", - "protein_translation_length": 235, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129707" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76222" - ], - [ - "gene_synonym", - "EcoGene:EG14003" - ], - [ - "gene_synonym", - "ynjA" - ], - [ - "gene_synonym", - "NP_416267.1" - ], - [ - "gene_synonym", - "GeneID:946270" - ], - [ - "gene_synonym", - "ASAP:ABE-0005839" - ], - [ - "gene_synonym", - "JW1742" - ], - [ - "gene_synonym", - "ECK1751" - ], - [ - "gene_synonym", - "b1753" - ] - ], - "dna_sequence": "ATGGGTTTACCGCCGCTTAGCAAAATTCCTTTAATTTTACGTCCACAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTGCTAAGCCCCATTCGCTGGTGGGGGCGGATCCCGTTTATCTTTTATCTGGTGTCGATGTTTGTTGGCTGGCTGGAGCGCAAACGCTCACCGCTCGATCCGGTAGTACGATCGCTTGTCAGCGCGCGCATTGCGCAAATGTGCCTGTGTGAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAA", - "dna_sequence_length": 549, - "functions": [ - "carboxymuconolactone decarboxylase family protein" - ], - "id": "CDS_1742", - "location": [ - [ - "NC_000913", - 1835515, - "+", - 549 - ] - ], - "md5": "e2eb9a3bbd3bc994787dd1d83f216dfe", - "parent_gene": "", - "protein_md5": "641300ae470669096f53e556a4003f65", - "protein_translation": "MGLPPLSKIPLILRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLVSMFVGWLERKRSPLDPVVRSLVSARIAQMCLCEFCVDITSMKVAERTGSSDKLLAVADWRQSPLFSDEERLALEYAEAASVTPPTVDDALRTRLAAHFDAQALTELTALIGLQNLSARFNSAMDIPAQGLCRIPEKRS", - "protein_translation_length": 182, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14004" - ], - [ - "gene_synonym", - "ECK1752" - ], - [ - "gene_synonym", - "JW5284" - ], - [ - "gene_synonym", - "NP_416268.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0005841" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76223" - ], - [ - "gene_synonym", - "ynjB" - ], - [ - "gene_synonym", - "GI:90111323" - ], - [ - "gene_synonym", - "GeneID:946271" - ], - [ - "gene_synonym", - "b1754" - ] - ], - "dna_sequence": "ATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAACCGCTATCTCGACTGGGTGAGCGGCGAGATGAAAACCCATTACGCTATAAACCTGAAGATTGTCCGTCTGGCGGATGCCGCAGACGCGGTGAAGCGCATTCAGACCGAAGCCGCAGCCGGACGTAAAACGGGCGGCTCGGTGGATCTGCTCTGGGTGAACGGCGAAAACTTCCGCACCTTAAAAGAGGCCAATTTATTACAAACGGGCTGGGCGGAGACTCTGCCCAACTGGCGCTATGTCGACACACAGCTGCCGGTGCGGGAAGATTTTTCTGTGCCGACACAAGGTGCGGAATCGCCCTGGGGCGGCGCACAACTGACGTTTATCGCCCGCCGCGATGTTACGCCACAGCCACCACAAACGCCGCAAGCCTTACTGGAGTTTGCTAAAGCCAATCCCGGCACGGTTACCTATCCGCGCCCACCGGACTTTACCGGCACGGCGTTTCTTGAACAGTTGCTGATTATGCTGACGCCCGATCCCGCCGCATTAAAAGAAGCGCCGGACGATGCGACTTTCGCCCGTGTCACTGCTCCCTTGTGGCAATATCTTGATGTGCTGCATCCGTATTTGTGGCGCGAAGGAAAGGATTTCCCGCCTTCACCCGCGCGGATGGATGCTCTGCTGAAAGCCGGCACATTGCGCCTGTCGCTGACCTTTAACCCCGCGCATGCGCAGCAAAAAATCGCCAGCGGCGATTTGCCTGCAAGCAGTTACAGTTTTGGCTTTCGCGAGGGGATGATTGGCAACGTGCATTTCGTCACCATTCCTGCCAACGCGAATGCCAGTGCTGCGGCGAAGGTAGTTGCCAATTTCCTGCTCTCACCCGATGCGCAACTGCGTAAAGCAGATCCCGCTGTCTGGGGCGATCCTTCTGTTCTCGATCCGCAAAAACTGCCTGACGGGCAGCGCGAATCATTGCAATCAAGAATGCCGCAGGATCTGCCGCCGGTACTGGCTGAACCGCACGCAGGTTGGGTAAATGCGCTGGAACAAGAATGGCTACACCGTTACGGTACGCATTAA", - "dna_sequence_length": 1167, - "functions": [ - "putative ABC transporter periplasmic binding protein" - ], - "id": "CDS_1743", - "location": [ - [ - "NC_000913", - 1836073, - "+", - 1167 - ] - ], - "md5": "643e73e7df693766344ae7742fdbc532", - "parent_gene": "", - "protein_md5": "24cd8247be640d2cd90e0b61801af68f", - "protein_translation": "MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDTAINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGENFRTLKEANLLQTGWAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRDVTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDATFARVTAPLWQYLDVLHPYLWREGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKIASGDLPASSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFLLSPDAQLRKADPAVWGDPSVLDPQKLPDGQRESLQSRMPQDLPPVLAEPHAGWVNALEQEWLHRYGTH", - "protein_translation_length": 388, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1753" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76224" - ], - [ - "gene_synonym", - "JW5285" - ], - [ - "gene_synonym", - "ASAP:ABE-0005843" - ], - [ - "gene_synonym", - "NP_416269.4" - ], - [ - "gene_synonym", - "EcoGene:EG14005" - ], - [ - "gene_synonym", - "ynjC" - ], - [ - "gene_synonym", - "GI:145698277" - ], - [ - "gene_synonym", - "GeneID:946273" - ], - [ - "gene_synonym", - "b1755" - ] - ], - "dna_sequence": "ATGGCTACACCGTTACGGTACGCATTAATCTTTTTGCTGTGGGCGATGGTGGCGGTGATTTATGCACCGCTGATCCCGGCAGCTCTCACGCTGATATCGCCTGCTTTGTCGTTGACACACTGGCAGGCGTTATTTGCCGATCCACAGTTACCGCAGGCATTACTGGCAACGCTGGTGTCGACAACCATCGCGGCGGTCGGGGCATTGTTGATTGCCCTGCTGGTGATTGTGGCGCTGTGGCCTGGGCCGAAATGGCAGCGTATGTGCGCCCGTCTGCCGTGGCTGCTCGCCATTCCCCATGTGGCTTTTGCCACCAGCGCCCTTCTGCTCTTTGCTGACGGAGGGCTGCTTTATGACTATTTCCCGTATTTCACTCCGCCAATGGACCGATTTGGCATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTAGCAGCAGTATTGAGCGAAAAATGGCTGTTGCAGCAGGTCATTGTGCTGGATTCGCTGGGCTACAGCCGCTGGCAATGCCTGAACTGGCTGCTGTTGCCCTCCGTCGCGCCTGCGCTGGCAATGGCGATGCTGGCGATTGTTGCCTGGTCGCTGTCGGTCGTGGATGTGGCAATTATTCTCGGGCCAGGTAATCCCCCGACGCTGGCGGTAATTAGCTGGCAGTGGTTAACCCAGGGCGACATTGACCAACAAACAAAAGGCGCGCTTGCCAGCCTGCTGTTGATGCTGTTACTCGCCGCCTACGTTTTGCTGAGCTATCTGCTATGGCGCAGCTGGCGGCGCACTATTCCCCGCGTAGATGGCGTTCGCAAGCCTGCCACGCCTTTATTGCCGGGCAATACGCTGGCGATTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTCTGCTGGCGATCCTCGCGGATCAGTCGACGATCAATAGTGAAGCGCTCATCAACAGCCTGACAATGGGGCTGGTGGCGACATTCATCGCTTTGCTCCTGTTACTGCTGTGGCTGGAATGGGGGCCACAGCGTCGCCAGTTGTGGCTATGGTTGCCCATTTTATTACCTGCTCTGCCACTGGTGGCGGGCCAGTACACGCTGGCGCTATGGCTGAAACTGGATGGAAGCTGGACGGCGGTGGTCTGGGGGCATCTGCTGTGGGTGATGCCGTGGATGCTGTTTATCCTGCAACCCGCCTGGCAGCGCATTGATTCACGGTTAATTTTGATTGCGCAAACACTGGGCTGGTCGCGGGCCAAAATCTTCTTTTACGTGAAATGCCCACTCATGTTGCGCCCTGTGCTGATTGCCTTCGCGGTGGGATTTGCAGTCGGTATTGCGCAGTATATGCCAACGCTGTGGCTGGGCGCGGGGCGTTTTCCGACGCTCACCACTGAGGCGGTGGCATTAAGCAGCGGCGGCAGCAACGGTATTCTCGCCGCCCAGGCTTTATGGCAACTGCTATTACCGCTTATTATTTTTGCCCTGACCGCGTTAGTCGCAAAATGGGTAGGTTATGTCAGACAAGGACTCCGCTAA", - "dna_sequence_length": 1536, - "functions": [ - "putative ABC transporter permease" - ], - "id": "CDS_1744", - "location": [ - [ - "NC_000913", - 1837212, - "+", - 1536 - ] - ], - "md5": "cf053d008b7cb65d3e2d98c008894135", - "parent_gene": "", - "protein_md5": "f49c64015e3c7662c0c66c4badc25f63", - "protein_translation": "MATPLRYALIFLLWAMVAVIYAPLIPAALTLISPALSLTHWQALFADPQLPQALLATLVSTTIAAVGALLIALLVIVALWPGPKWQRMCARLPWLLAIPHVAFATSALLLFADGGLLYDYFPYFTPPMDRFGIGLGLTLAVKESAFLLWILAAVLSEKWLLQQVIVLDSLGYSRWQCLNWLLLPSVAPALAMAMLAIVAWSLSVVDVAIILGPGNPPTLAVISWQWLTQGDIDQQTKGALASLLLMLLLAAYVLLSYLLWRSWRRTIPRVDGVRKPATPLLPGNTLAIFLPLTGVLCVVLLAILADQSTINSEALINSLTMGLVATFIALLLLLLWLEWGPQRRQLWLWLPILLPALPLVAGQYTLALWLKLDGSWTAVVWGHLLWVMPWMLFILQPAWQRIDSRLILIAQTLGWSRAKIFFYVKCPLMLRPVLIAFAVGFAVGIAQYMPTLWLGAGRFPTLTTEAVALSSGGSNGILAAQALWQLLLPLIIFALTALVAKWVGYVRQGLR", - "protein_translation_length": 511, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5286" - ], - [ - "gene_synonym", - "ASAP:ABE-0005845" - ], - [ - "gene_synonym", - "ECK1754" - ], - [ - "gene_synonym", - "EcoGene:EG14006" - ], - [ - "gene_synonym", - "ynjD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76909" - ], - [ - "gene_synonym", - "NP_416270.1" - ], - [ - "gene_synonym", - "GeneID:944965" - ], - [ - "gene_synonym", - "b1756" - ], - [ - "gene_synonym", - "GI:16129710" - ] - ], - "dna_sequence": "ATGCTCTGCGTGAAAAATGTTTCGCTACGTTTACCAGAAAGCCGCTTGCTGACAAACGTTAACTTTACGGTGGATAAAGGTGACATTGTCACGTTAATGGGGCCGTCTGGCTGTGGAAAATCCACTCTGTTTTCATGGATGATTGGTGCACTGGCCGAACAGTTTTCTTGTACAGGTGAGCTATGGCTCAATGAGCAACGGATTGACATCCTACCCACCGCACAGCGTCAGATTGGCATTCTTTTTCAGGATGCACTGTTATTTGACCAGTTCAGTGTCGGGCAAAATTTACTGCTGGCGCTACCGGCGACACTTAAAGGGAATGCCCGACGTAATGCCGTGAATGATGCACTTGAGCGTTCAGGCCTTGAGGGAGCTTTCCATCAGGATCCTGCCACTTTGTCTGGCGGTCAGCGAGCGCGCGTTGCTCTACTACGCGCCCTTCTCGCCCAACCAAAAGCGTTACTCCTGGATGAGCCATTCAGCCGTCTTGATGTGGCTCTGCGCGATAATTTTCGCCAGTGGGTGTTCAGCGAAGTTCGCGCCCTGGCGATCCCCGTCGTTCAGGTAACGCACGATCTCCAGGATGTTCCTGCTGATAGTTCTGTTCTGGATATGGCGCAGTGGTCAGAAAATTACAACAAACTGCGATAA", - "dna_sequence_length": 654, - "functions": [ - "putative ABC transporter ATPase" - ], - "id": "CDS_1745", - "location": [ - [ - "NC_000913", - 1838747, - "+", - 654 - ] - ], - "md5": "804bd673b4c32fbe8fba0be79b73745f", - "parent_gene": "", - "protein_md5": "193a16e82d36d00006825dbeb6d1dba4", - "protein_translation": "MLCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLFSWMIGALAEQFSCTGELWLNEQRIDILPTAQRQIGILFQDALLFDQFSVGQNLLLALPATLKGNARRNAVNDALERSGLEGAFHQDPATLSGGQRARVALLRALLAQPKALLLDEPFSRLDVALRDNFRQWVFSEVRALAIPVVQVTHDLQDVPADSSVLDMAQWSENYNKLR", - "protein_translation_length": 217, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5287" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P78067" - ], - [ - "gene_synonym", - "ECK1755" - ], - [ - "gene_synonym", - "GI:90111324" - ], - [ - "gene_synonym", - "NP_416271.4" - ], - [ - "gene_synonym", - "ynjE" - ], - [ - "gene_synonym", - "ASAP:ABE-0005848" - ], - [ - "gene_synonym", - "EcoGene:EG14007" - ], - [ - "gene_synonym", - "GeneID:946505" - ], - [ - "gene_synonym", - "b1757" - ] - ], - "dna_sequence": "ATGAAACGTGTTTCTCAAATGACCGCGCTGGCAATGGCTTTAGGGCTGGCTTGCGCTTCTTCGTGGGCCGCTGAACTGGCGAAGCCTCTTACACTTGACCAGCTTCAACAACAAAATGGCAAAGCGATAGATACTCGCCCCAGCGCGTTTTATAACGGCTGGCCACAAACCTTAAATGGCCCTTCTGGTCATGAACTTGCCGCCTTAAACCTCTCTGCCAGCTGGCTTGACAAAATGAGCACCGAACAGCTCAACGCGTGGATCAAGCAACATAACCTGAAAACCGATGCTCCGGTGGCGCTGTACGGTAATGACAAAGATGTCGACGCCGTCAAAACGCGACTGCAAAAAGCAGGTTTAACGCATATCTCCATCCTGAGTGACGCGCTAAGCGAACCTTCCCGTCTGCAAAAACTGCCGCATTTTGAGCAGCTGGTTTATCCGCAATGGCTGCACGACCTGCAACAAGGTAAAGAGGTTACGGCGAAACCTGCCGGTGACTGGAAAGTCATTGAAGCGGCCTGGGGCGCTCCTAAGCTTTACCTTATCAGCCATATTCCCGGCGCTGACTACATCGATACCAACGAAGTGGAAAGTGAACCGCTGTGGAACAAAGTTTCTGATGAACAACTAAAAGCGATGCTGGCAAAACACGGCATTCGCCATGACACCACGGTCATTCTGTATGGGCGTGACGTATACGCTGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAA", - "dna_sequence_length": 1308, - "functions": [ - "molybdopterin synthase sulfurtransferase" - ], - "id": "CDS_1746", - "location": [ - [ - "NC_000913", - 1839467, - "+", - 1308 - ] - ], - "md5": "77c1e46a8fe029c7a491ed9f2af49c2c", - "parent_gene": "", - "protein_md5": "c893794ff41082ba94584f795169055c", - "protein_translation": "MKRVSQMTALAMALGLACASSWAAELAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNGPSGHELAALNLSASWLDKMSTEQLNAWIKQHNLKTDAPVALYGNDKDVDAVKTRLQKAGLTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERGPDSSK", - "protein_translation_length": 435, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76226" - ], - [ - "gene_synonym", - "GeneID:946221" - ], - [ - "gene_synonym", - "NP_416272.2" - ], - [ - "gene_synonym", - "ECK1756" - ], - [ - "gene_synonym", - "GI:90111325" - ], - [ - "gene_synonym", - "EcoGene:EG14008" - ], - [ - "gene_synonym", - "ynjF" - ], - [ - "gene_synonym", - "b1758" - ], - [ - "gene_synonym", - "ASAP:ABE-0005850" - ], - [ - "gene_synonym", - "JW1747" - ] - ], - "dna_sequence": "GTGCTAGACCGCCATCTTCATCCCCGGATTAAACCGTTGTTGCATCAGTGCGTGCGGGTTCTTGATAAACCGGGCATTACGCCAGATGGTTTAACATTAGTGGGATTTGCCATCGGCGTGCTGGCTCTGCCGTTTCTGGCGCTGGGCTGGTATCTGGCGGCGCTAGTCGTCATTTTGTTGAACAGGCTGCTTGATGGTCTGGACGGTGCGCTGGCGCGGCGCAGAGAGCTTACCGACGCGGGCGGCTTTCTTGATATTTCTCTCGATTTTCTCTTTTACGCGCTGGTGCCGTTTGGCTTTATTCTTGCTGCACCGGAGCAAAATGCGCTGGCAGGCGGCTGGTTGTTGTTTGCGTTTATCGGCACGGGCAGCAGTTTTCTCGCCTTTGCTGCACTGGCAGCAAAACATCAGATTGATAACCCCGGTTATGCACATAAGTCGTTTTACTATCTGGGGGGATTAACCGAAGGCACAGAAACGATCTTACTGTTTGTGCTGGGATGTTTATTCCCTGCATGGTTTGCGTGGTTTGCGTGGATCTTCGGTGCGTTGTGCTGGATGACGACCTTTACGCGGGTGTGGAGTGGGTATCTGACGCTGAAGTCGCTCCAGCGTCAGTAA", - "dna_sequence_length": 621, - "functions": [ - "CDP-alcohol phosphatidyltransferase family inner membrane protein" - ], - "id": "CDS_1747", - "location": [ - [ - "NC_000913", - 1841403, - "-", - 621 - ] - ], - "md5": "eda514aaa066f5c24dc70eeb29420c99", - "parent_gene": "", - "protein_md5": "6e3abafda766d308c0f1db9ded7e5714", - "protein_translation": "MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFILAAPEQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ", - "protein_translation_length": 206, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005855" - ], - [ - "gene_synonym", - "ECK1757" - ], - [ - "gene_synonym", - "nudG" - ], - [ - "gene_synonym", - "orf135" - ], - [ - "gene_synonym", - "ynjG" - ], - [ - "gene_synonym", - "EcoGene:EG14009" - ], - [ - "gene_synonym", - "GeneID:946277" - ], - [ - "gene_synonym", - "JW1748" - ], - [ - "gene_synonym", - "b1759" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77788" - ], - [ - "gene_synonym", - "GI:16129713" - ], - [ - "gene_synonym", - "NP_416273.1" - ] - ], - "dna_sequence": "ATGAAAATGATTGAAGTTGTTGCCGCCATCATTGAACGTGATGGCAAAATTTTACTCGCGCAACGCCCCGCCCAGAGCGATCAGGCGGGATTATGGGAGTTTGCCGGTGGTAAAGTCGAGCCGGATGAAAGTCAGCGGCAGGCGCTGGTGCGTGAGTTACGCGAAGAACTGGGCATCGAAGCAACTGTGGGTGAATATGTTGCCAGCCATCAGCGAGAAGTTTCGGGGCGGATTATCCATCTTCATGCCTGGCACGTACCCGACTTCCACGGGACGTTACAGGCACATGAACATCAGGCGCTGGTCTGGTGCTCACCTGAAGAGGCGCTGCAATATCCGCTGGCCCCTGCTGACATTCCATTATTAGAGGCGTTTATGGCTTTACGCGCCGCCAGACCAGCGGATTAG", - "dna_sequence_length": 408, - "functions": [ - "CTP pyrophosphohydrolase", - "also hydrolyzes 2-hydroxy-dATP, 8-hydroxy-dGTP, 5-hydroxy-CTP, dCTP and 5-methyl-dCTP" - ], - "id": "CDS_1748", - "location": [ - [ - "NC_000913", - 1841490, - "+", - 408 - ] - ], - "md5": "b4955c8e55d26f39075a6871c824292d", - "parent_gene": "", - "protein_md5": "3615410c0dcb65f92791e942145bfee2", - "protein_translation": "MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQREVSGRIIHLHAWHVPDFHGTLQAHEHQALVWCSPEEALQYPLAPADIPLLEAFMALRAARPAD", - "protein_translation_length": 135, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ynjH" - ], - [ - "gene_synonym", - "EcoGene:EG14010" - ], - [ - "gene_synonym", - "ECK1758" - ], - [ - "gene_synonym", - "ASAP:ABE-0005858" - ], - [ - "gene_synonym", - "NP_416274.1" - ], - [ - "gene_synonym", - "JW1749" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76227" - ], - [ - "gene_synonym", - "b1760" - ], - [ - "gene_synonym", - "GeneID:946279" - ], - [ - "gene_synonym", - "GI:16129714" - ] - ], - "dna_sequence": "GTGAGTCGAGCATTGTTCGCCGTAGTATTAGCATTTCCATTAATTGCACTGGCTAACCCGCATTATCGTCCGGACGTGGAGGTAAACGTACCGCCAGAAGTGTTCAGTTCAGGCGGGCAGTCAGCGCAGCCCTGTACTCAGTGCTGCGTTTATCAGGATCAAAATTATTCTGAAGGGGCGGTAATTAAAGCCGAAGGAATACTGCTGCAATGCCAGCGTGATGACAAAACCCTTAGCACTAATCCGCTGGTCTGGCGGCGCGTAAAGCCATAA", - "dna_sequence_length": 273, - "functions": [ - "DUF1496 family protein" - ], - "id": "CDS_1749", - "location": [ - [ - "NC_000913", - 1842135, - "-", - 273 - ] - ], - "md5": "6eb7ec0d9b18d8888386c2e6898bd862", - "parent_gene": "", - "protein_md5": "47b472a80816e3ee4e15e76332c1dc04", - "protein_translation": "MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQPCTQCCVYQDQNYSEGAVIKAEGILLQCQRDDKTLSTNPLVWRRVKP", - "protein_translation_length": 90, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00370" - ], - [ - "gene_synonym", - "ASAP:ABE-0005865" - ], - [ - "gene_synonym", - "ECK1759" - ], - [ - "gene_synonym", - "GeneID:946802" - ], - [ - "gene_synonym", - "b1761" - ], - [ - "gene_synonym", - "gdhA" - ], - [ - "gene_synonym", - "JW1750" - ], - [ - "gene_synonym", - "EcoGene:EG10372" - ], - [ - "gene_synonym", - "NP_416275.1" - ], - [ - "gene_synonym", - "GI:16129715" - ] - ], - "dna_sequence": "ATGGATCAGACATATTCTCTGGAGTCATTCCTCAACCATGTCCAAAAGCGCGACCCGAATCAAACCGAGTTCGCGCAAGCCGTTCGTGAAGTAATGACCACACTCTGGCCTTTTCTTGAACAAAATCCAAAATATCGCCAGATGTCATTACTGGAGCGTCTGGTTGAACCGGAGCGCGTGATCCAGTTTCGCGTGGTATGGGTTGATGATCGCAACCAGATACAGGTCAACCGTGCATGGCGTGTGCAGTTCAGCTCTGCCATCGGCCCGTACAAAGGCGGTATGCGCTTCCATCCGTCAGTTAACCTTTCCATTCTCAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCTTCACCGGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGGCCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAA", - "dna_sequence_length": 1344, - "functions": [ - "glutamate dehydrogenase, NADP-specific" - ], - "id": "CDS_1750", - "location": [ - [ - "NC_000913", - 1842371, - "+", - 1344 - ] - ], - "md5": "dcf31e5b55a47e1f44f6a987c458029c", - "parent_gene": "", - "protein_md5": "9ec8e26fcf5c160f533bf9a69dec0212", - "protein_translation": "MDQTYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPKYRQMSLLERLVEPERVIQFRVVWVDDRNQIQVNRAWRVQFSSAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKASRDGRVADYAKEFGLVYLEGQQPWSLPVDIALPCATQNELDVDAAHQLIANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLGWKAEKVDARLHHIMLDIHHACVEHGGEGEQTNYVQGANIAGFVKVADAMLAQGVI", - "protein_translation_length": 447, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946239" - ], - [ - "gene_synonym", - "ynjI" - ], - [ - "gene_synonym", - "EcoGene:EG14011" - ], - [ - "gene_synonym", - "NP_416276.4" - ], - [ - "gene_synonym", - "GI:90111326" - ], - [ - "gene_synonym", - "ECK1760" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76228" - ], - [ - "gene_synonym", - "JW5288" - ], - [ - "gene_synonym", - "b1762" - ], - [ - "gene_synonym", - "ASAP:ABE-0005867" - ] - ], - "dna_sequence": "ATGAAAAAAGTTTTATTACAAAACCATCCTGGGAGCGAGAAGTATTCTTTTAATGGCTGGGAAATATTTAATAGTAATTTTGAACGGATGATTAAAGAAAATAAGGCCATGCTGCTTTGTAAGTGGGGGTTTTATTTAACATGTGTTGTCGCTGTAATGTTTGTGTTCGCAGCGATAACATCCAACGGTTTGAATGAAAGAGGCCTGATTACCGCGGGATGCTCTTTTCTTTATCTATTAATTATGATGGGGCTTATTGTTCGGGCCGGTTTTAAAGCAAAAAAAGAACAACTGCATTATTATCAGGCTAAAGGTATTGAGCCGCTCAGTATCGAGAAGTTACAGGCGCTACAATTGATCGCACCTTATCGATTCTATCATAAGCAATGGTCTGAAACGCTGGAGTTCTGGCCGCGAAAGCCTGAACCTGGCAAAGATACCTTCCAATATCATGTGCTTCCTTTTGACTCGATCGATATCATAAGTAAAAGACGCGAGTCTTTAGAGGATCAATGGGGTATCGAAGATAGCGAAAGTTATTGTGCCTTAATGGAGCATTTTCTTTCTGGCGACCATGGAGCCAATACCTTTAAAGCAAACATGGAGGAAGCCCCAGAGCAGGTTATCGCCTTGTTGAATAAATTTGCTGTTTTTCCCTCAGACTATATCTCTGATTGCGCTAATCATAGCTCCGGTAAATCCTCGGCGAAGCTAATATGGGCGGCGGAATTATCATGGATGATCTCGATATCAAGCACAGCTTTTCAAAACGGGACAATTGAAGAAGAACTGGCCTGGCATTATATAATGCTTGCTTCTCGAAAGGCGCACGAGTTGTTCGAAAGCGAAGAAGATTATCAAAAAAATAGTCAAATGGGATTTCTTTACTGGCATATCTGCTGCTATCGCAGAAAGTTAACGGATGCTGAACTTGAAGCGTGTTATCGTTACGACAAGCAGTTTTGGGAGCACTACAGTAAGAAATGCCGTTGGCCCATAAGAAATGTTCCGTGGGGAGCATCATCCGTTAAATACTCATAA", - "dna_sequence_length": 1041, - "functions": [ - "inner membrane protein" - ], - "id": "CDS_1751", - "location": [ - [ - "NC_000913", - 1844871, - "-", - 1041 - ] - ], - "md5": "543342dabdcd4f013a0b5bf4e7934ee8", - "parent_gene": "", - "protein_md5": "1a304f8fe6709bfdd413db71ca9cfbe4", - "protein_translation": "MKKVLLQNHPGSEKYSFNGWEIFNSNFERMIKENKAMLLCKWGFYLTCVVAVMFVFAAITSNGLNERGLITAGCSFLYLLIMMGLIVRAGFKAKKEQLHYYQAKGIEPLSIEKLQALQLIAPYRFYHKQWSETLEFWPRKPEPGKDTFQYHVLPFDSIDIISKRRESLEDQWGIEDSESYCALMEHFLSGDHGANTFKANMEEAPEQVIALLNKFAVFPSDYISDCANHSSGKSSAKLIWAAELSWMISISSTAFQNGTIEEELAWHYIMLASRKAHELFESEEDYQKNSQMGFLYWHICCYRRKLTDAELEACYRYDKQFWEHYSKKCRWPIRNVPWGASSVKYS", - "protein_translation_length": 346, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P14294" - ], - [ - "gene_synonym", - "ASAP:ABE-0005869" - ], - [ - "gene_synonym", - "NP_416277.1" - ], - [ - "gene_synonym", - "ECK1761" - ], - [ - "gene_synonym", - "GeneID:946141" - ], - [ - "gene_synonym", - "GI:16129717" - ], - [ - "gene_synonym", - "mutR" - ], - [ - "gene_synonym", - "EcoGene:EG11014" - ], - [ - "gene_synonym", - "b1763" - ], - [ - "gene_synonym", - "topB" - ], - [ - "gene_synonym", - "JW1752" - ] - ], - "dna_sequence": "ATGCGGTTGTTTATTGCCGAAAAACCGAGTCTGGCGCGCGCCATTGCTGATGTCCTGCCCAAACCGCACCGGAAAGGCGATGGCTTTATCGAGTGCGGTAATGGTCAGGTGGTGACCTGGTGTATCGGTCACCTGCTTGAGCAGGCGCAGCCAGACGCCTACGACAGCCGCTATGCGCGCTGGAATCTTGCGGATTTGCCGATTGTCCCGGAAAAGTGGCAATTACAGCCCCGACCCTCCGTGACCAAACAACTTAACGTCATCAAACGGTTCCTGCATGAAGCCAGCGAAATCGTTCACGCCGGGGACCCGGATCGTGAAGGGCAATTGCTGGTGGATGAAGTGCTGGACTATCTGCAACTGGCACCGGAAAAGCGCCAGCAGGTACAGCGTTGCTTGATAAACGACCTGAACCCGCAGGCGGTTGAGCGGGCGATCGACCGTCTTCGTTCCAACAGTGAGTTTGTACCGCTGTGCGTTTCTGCGCTGGCGCGAGCGCGTGCCGACTGGCTGTACGGCATCAATATGACCCGTGCGTATACCATTCTCGGTCGCAATGCCGGTTATCAGGGCGTACTTTCCGTGGGACGCGTGCAGACGCCCGTGCTTGGGCTGGTGGTGCGCCGCGATGAAGAGATTGAAAACTTCGTGGCGAAAGACTTCTTTGAAGTCAAAGCACATATCGTGACACCTGCCGATGAGCGGTTTACCGCTATCTGGCAACCGAGCGAAGCGTGTGAACCGTACCAGGATGAAGAAGGGCGCTTGTTACATCGTCCACTGGCGGAGCATGTGGTTAACCGCATTAGTGGTCAACCGGCTATTGTCACCAGCTATAACGATAAACGGGAATCAGAATCCGCGCCGCTGCCTTTTTCGCTTTCAGCGTTGCAGATTGAAGCGGCAAAACGTTTTGGTCTGAGTGCGCAGAACGTGCTTGATATCTGCCAGAAACTGTACGAAACGCACAAGCTAATCACTTATCCGCGTTCTGATTGTCGCTATTTGCCAGAAGAACATTTTGCCGGACGCCACGCGGTGATGAATGCCATCAGTGTTCATGCACCGGATCTGTTGCCGCAGCCAGTGGTAGATCCAGATATACGCAACCGCTGTTGGGATGACAAAAAGGTCGATGCGCACCACGCCATCATTCCGACCGCACGGAGTTCTGCGATCAACCTGACGGAGAACGAAGCGAAGGTCTATAACCTGATTGCCCGTCAGTATCTGATGCAATTCTGCCCGGATGCGGTGTTCCGCAAGTGTGTTATCGAACTGGACATTGCCAAAGGCAAATTTGTCGCTAAAGCGCGTTTTCTTGCTGAAGCAGGCTGGCGCACGCTGTTAGGCAGCAAAGAGCGCGATGAAGAAAACGACGGCACGCCACTGCCTGTGGTGGCGAAAGGCGATGAGTTGCTGTGTGAAAAAGGTGAAGTGGTAGAGCGGCAAACCCAGCCGCCGCGCCATTTTACCGATGCAACACTGCTTTCGGCGATGACCGGGATCGCGCGCTTTGTGCAGGATAAAGATCTGAAAAAGATCCTCCGTGCGACCGATGGTCTGGGGACAGAGGCAACGCGTGCCGGGATTATTGAACTGTTGTTCAAGCGTGGTTTCCTGACCAAAAAAGGGCGCTATATCCACTCCACCGACGCCGGAAAAGCGCTATTCCATTCGCTGCCGGAGATGGCGACGCGACCGGACATGACCGCGCACTGGGAATCGGTGCTGACGCAAATCAGCGAAAAGCAGTGTCGCTATCAGGACTTTATGCAGCCGCTGGTGGGGACGCTATATCAGCTTATTGATCAAGCCAAACGTACGCCGGTGCGGCAGTTTCGCGGCATTGTGGCTCCGGGCAGTGGTGGCAGTGCTGATAAGAAAAAGGCTGCACCGCGTAAACGTAGTGCGAAAAAAAGTCCGCCAGCAGATGAAGTCGGAAGCGGGGCGATAGCGTAA", - "dna_sequence_length": 1962, - "functions": [ - "DNA topoisomerase III" - ], - "id": "CDS_1752", - "location": [ - [ - "NC_000913", - 1846960, - "-", - 1962 - ] - ], - "md5": "c77b0e2e6e967403ef6a4035ad4e1493", - "parent_gene": "", - "protein_md5": "9c398b236aac30be7e202dcd1dfd3a2a", - "protein_translation": "MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAGDPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSAINLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLLGSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMATRPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAPGSGGSADKKKAAPRKRSAKKSPPADEVGSGAIA", - "protein_translation_length": 653, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005872" - ], - [ - "gene_synonym", - "ECK1762" - ], - [ - "gene_synonym", - "selD" - ], - [ - "gene_synonym", - "NP_416278.1" - ], - [ - "gene_synonym", - "b1764" - ], - [ - "gene_synonym", - "GI:16129718" - ], - [ - "gene_synonym", - "GeneID:946768" - ], - [ - "gene_synonym", - "fdhB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16456" - ], - [ - "gene_synonym", - "EcoGene:EG10943" - ], - [ - "gene_synonym", - "JW1753" - ] - ], - "dna_sequence": "ATGAGCGAGAACTCGATTCGTTTGACCCAATACAGCCACGGAGCTGGTTGCGGCTGTAAAATTTCCCCAAAAGTGTTGGAAACCATCCTGCATAGTGAGCAGGCGAAGTTTGTTGATCCGAATTTGCTTGTGGGTAATGAAACCCGCGACGATGCGGCGGTGTACGATCTGGGCAATGGCACCAGCGTTATCAGTACCACCGACTTCTTTATGCCGATCGTTGATAATCCTTTCGATTTTGGCCGCATTGCGGCGACTAACGCCATCAGCGATATCTTCGCGATGGGGGGCAAACCGATTATGGCGATTGCGATCCTCGGCTGGCCGATTAACAAACTTTCCCCAGAAATTGCCCGCGAAGTGACCGAAGGTGGACGCTATGCATGTCGTCAGGCGGGTATTGCGCTGGCTGGCGGTCACTCCATCGATGCGCCGGAGCCGATTTTTGGTCTGGCGGTAACGGGGATCGTACCGACCGAGCGGGTGAAGAAAAACAGTACCGCACAAGCCGGATGCAAACTGTTCCTGACGAAACCGCTGGGGATCGGCGTTCTTACCACGGCTGAGAAAAAATCACTGTTGAAACCAGAACATCAGGGACTGGCGACGGAAGTGATGTGCCGGATGAACATCGCAGGCGCGTCCTTTGCCAACATCGAAGGCGTAAAAGCGATGACCGACGTTACGGGCTTTGGTCTGCTGGGCCACTTGAGCGAAATGTGTCAGGGGGCTGGTGTGCAGGCACGCGTCGACTATGAAGCGATCCCGAAACTCCCCGGTGTTGAAGAGTACATTAAGTTGGGCGCAGTACCTGGCGGCACTGAACGTAACTTTGCCAGCTACGGTCATCTGATGGGTGAAATGCCGCGTGAAGTGCGCGATCTGCTGTGTGATCCGCAAACTTCTGGCGGTTTGCTGCTGGCGGTCATGCCGGAAGCAGAAAATGAGGTCAAAGCTACAGCCGCCGAGTTTGGCATTGAACTGACGGCAATTGGCGAACTGGTGCCAGCGCGCGGCGGTCGTGCCATGGTTGAGATTCGTTAA", - "dna_sequence_length": 1044, - "functions": [ - "selenophosphate synthase" - ], - "id": "CDS_1753", - "location": [ - [ - "NC_000913", - 1848008, - "-", - 1044 - ] - ], - "md5": "4ad06d3abbc6b2dc6090ea21db4163e9", - "parent_gene": "", - "protein_md5": "cafca265a3bf7afba1ec32aea9845b77", - "protein_translation": "MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLVGNETRDDAAVYDLGNGTSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTERVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFANIEGVKAMTDVTGFGLLGHLSEMCQGAGVQARVDYEAIPKLPGVEEYIKLGAVPGGTERNFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKATAAEFGIELTAIGELVPARGGRAMVEIR", - "protein_translation_length": 347, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416279.1" - ], - [ - "gene_synonym", - "b1765" - ], - [ - "gene_synonym", - "GeneID:945964" - ], - [ - "gene_synonym", - "ECK1763" - ], - [ - "gene_synonym", - "ASAP:ABE-0005875" - ], - [ - "gene_synonym", - "ydjA" - ], - [ - "gene_synonym", - "GI:16129719" - ], - [ - "gene_synonym", - "EcoGene:EG11134" - ], - [ - "gene_synonym", - "JW1754" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACY1" - ] - ], - "dna_sequence": "ATGGATGCACTCGAACTATTGATCAATCGCCGTAGCGCCTCCCGCTTGGCTGAACCCGCGCCAACGGGTGAACAACTGCAAAACATCCTGCGTGCGGGTATGCGTGCGCCGGACCATAAGTCCATGCAACCGTGGCATTTTTTTGTGATTGAAGGGGAAGGGCGCGAGCGTTTCAGCGCCGTACTGGAACAGGGGGCGATTGCTGCCGGTAGTGATGACAAAGCTATCGACAAAGCCCGTAATGCGCCGTTCCGCGCACCGCTCATCATCACGGTGGTGGCGAAATGCGAAGAGAATCATAAAGTCCCGCGCTGGGAACAGGAAATGTCTGCCGGATGCGCGGTCATGGCGATGCAAATGGCAGCAGTTGCCCAGGGGTTTGGCGGCATCTGGCGCAGTGGCGCATTAACTGAAAGTCCGGTAGTGCGTGAAGCATTCGGTTGCCGTGAGCAGGATAAAATTGTCGGTTTTCTCTACCTCGGTACGCCGCAGCTGAAAGCATCTACGTCGATTAACGTCCCGGACCCGACGCCGTTTGTAACTTATTTCTGA", - "dna_sequence_length": 552, - "functions": [ - "putative oxidoreductase" - ], - "id": "CDS_1754", - "location": [ - [ - "NC_000913", - 1848676, - "-", - 552 - ] - ], - "md5": "c0ffd2e483c09e31c3671340cab0c05e", - "parent_gene": "", - "protein_md5": "e6c1af58a06160fc94e702b4ca64be72", - "protein_translation": "MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQPWHFFVIEGEGRERFSAVLEQGAIAAGSDDKAIDKARNAPFRAPLIITVVAKCEENHKVPRWEQEMSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYLGTPQLKASTSINVPDPTPFVTYF", - "protein_translation_length": 183, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08395" - ], - [ - "gene_synonym", - "GI:16129720" - ], - [ - "gene_synonym", - "sppA" - ], - [ - "gene_synonym", - "EcoGene:EG10968" - ], - [ - "gene_synonym", - "NP_416280.1" - ], - [ - "gene_synonym", - "ECK1764" - ], - [ - "gene_synonym", - "b1766" - ], - [ - "gene_synonym", - "GeneID:946281" - ], - [ - "gene_synonym", - "JW1755" - ], - [ - "gene_synonym", - "ASAP:ABE-0005880" - ] - ], - "dna_sequence": "ATGCGAACCCTTTGGCGATTTATTGCCGGATTTTTTAAATGGACGTGGCGTCTGCTGAATTTCGTCCGTGAAATGGTACTTAACCTGTTCTTTATTTTCCTCGTACTGGTTGGTGTGGGGATTTGGATGCAGGTCAGTGGTGGTGATTCGAAAGAAACGGCCAGTCGTGGCGCACTGCTGCTGGACATTTCTGGTGTGATCGTCGATAAACCCGACAGTTCTCAGCGGTTTAGTAAATTAAGCCGCCAGCTGCTTGGTGCCAGTTCCGATCGTCTGCAGGAAAACTCACTGTTTGATATCGTCAACACTATTCGCCAGGCGAAGGACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACAAATCGTTGCTGGATAAGCTGAAAGTTTCCACCCATGTGTTCCGCGTGGGTACGTATAAATCTGCCGTTGAACCGTTTATTCGTGATGATATGTCACCGGCAGCCCGCGAAGCTGACAGCCGCTGGATTGGTGAGCTGTGGCAAAACTATCTGAATACTGTTGCCGCTAACCGGCAGATCCCTGCTGAGCAGGTATTCCCTGGCGCGCAAGGGTTGCTTGAGGGTTTAACCAAAACCGGTGGCGATACCGCGAAATATGCACTGGAAAACAAGCTGGTCGATGCACTGGCATCGAGTGCGGAAATCGAAAAAGCACTGACCAAAGAATTCGGCTGGAGTAAGACTGATAAAAATTATCGCGCCATCAGTTATTACGATTACGCATTGAAAACGCCGGCAGATACCGGTGACAGCATCGGTGTCGTCTTTGCTAATGGCGCAATTATGGATGGCGAGGAAACTCAGGGGAATGTTGGCGGTGATACCACTGCGGCACAAATCCGCGACGCTCGCCTTGACCCGAAAGTGAAAGCGATTGTCCTGCGTGTTAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGGATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCTCGGGGATTTCGATGATGCGGTCGCCAAAGCAGCAGAGCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGATGGACAACATGTCTGGTTCTGTCCGGGCAATGTTGCCAGATGCGTTCCAGGCCATGTTACCTGCACCGCTGGCCTCGGTAGCCTCTACCGTTAAAAGTGAAAGTGACAAGCTGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAA", - "dna_sequence_length": 1857, - "functions": [ - "protease IV (signal peptide peptidase)" - ], - "id": "CDS_1755", - "location": [ - [ - "NC_000913", - 1848837, - "+", - 1857 - ] - ], - "md5": "6a44dfa5fedaa8a993c9923a9bb6ba5d", - "parent_gene": "", - "protein_md5": "5dcbf935f5a340f2788eac3942e486ee", - "protein_translation": "MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQVSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIRQAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSGSVRAMLPDAFQAMLPAPLASVASTVKSESDKLAAFNDPQNRYAFCLTCANMR", - "protein_translation_length": 618, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10045" - ], - [ - "gene_synonym", - "GI:16129721" - ], - [ - "gene_synonym", - "ASAP:ABE-0005886" - ], - [ - "gene_synonym", - "NP_416281.1" - ], - [ - "gene_synonym", - "ECK1765" - ], - [ - "gene_synonym", - "b1767" - ], - [ - "gene_synonym", - "ansA" - ], - [ - "gene_synonym", - "JW1756" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A962" - ], - [ - "gene_synonym", - "GeneID:946278" - ] - ], - "dna_sequence": "ATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCTCGAGAATCTCGGTAAACCGGTCATTGTGACAGGGTCACAAATCCCGCTGGCTGAGTTACGCTCTGACGGACAAATTAATCTGCTGAATGCGTTGTACGTTGCGGCGAATTATCCGATCAACGAAGTAACGCTCTTTTTCAATAACCGATTGTATCGCGGCAACCGCACTACCAAAGCCCATGCCGATGGTTTTGATGCGTTTGCCTCTCCAAACCTTCCTCCGTTACTGGAAGCAGGTATCCATATTCGTCGTTTGAATACGCCACCCGCCCCGCACGGTGAAGGGGAATTAATCGTTCATCCAATCACCCCACAACCAATTGGCGTAGTGACGATTTATCCAGGGATTTCTGCTGACGTCGTGCGCAATTTTCTGCGCCAACCGGTGAAAGCATTGATTCTGCGCTCCTATGGCGTGGGTAATGCGCCACAAAACAAAGCCTTCCTGCAGGAATTACAAGAAGCCAGCGATCGCGGTATTGTGGTGGTCAACCTGACACAATGTATGTCCGGTAAAGTGAACATGGGTGGTTATGCCACCGGTAACGCCCTCGCCCATGCCGGCGTAATTGGCGGTGCAGATATGACTGTAGAAGCCACGCTAACCAAACTGCATTACCTGCTTAGCCAGGAACTGGATACTGAAACCATTCGCAAGGCCATGAGCCAAAACCTGCGCGGCGAACTGACGCCGGATGATTAA", - "dna_sequence_length": 1017, - "functions": [ - "cytoplasmic L-asparaginase 1" - ], - "id": "CDS_1756", - "location": [ - [ - "NC_000913", - 1850860, - "+", - 1017 - ] - ], - "md5": "be807b94fe8d7eb9adbd97c7f1c99c67", - "parent_gene": "", - "protein_md5": "f4af71ea214c1b0f3914e4c166f97980", - "protein_translation": "MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRPEMPDFTIHEYTPLMDSSDMTPEDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNRTTKAHADGFDAFASPNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIYPGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSGKVNMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQELDTETIRKAMSQNLRGELTPDD", - "protein_translation_length": 338, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005891" - ], - [ - "gene_synonym", - "NP_416282.4" - ], - [ - "gene_synonym", - "GeneID:946276" - ], - [ - "gene_synonym", - "GI:90111327" - ], - [ - "gene_synonym", - "ECK1766" - ], - [ - "gene_synonym", - "pncA" - ], - [ - "gene_synonym", - "nam" - ], - [ - "gene_synonym", - "ydjB" - ], - [ - "gene_synonym", - "EcoGene:EG11135" - ], - [ - "gene_synonym", - "JW1757" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21369" - ], - [ - "gene_synonym", - "b1768" - ] - ], - "dna_sequence": "ATGCCCCCTCGCGCCCTGTTACTGGTCGATTTACAAAATGATTTCTGTGCTGGTGGCGCGCTCGCCGTGCCGGAAGGTGACAGTACGGTGGATGTCGCTAACCGCCTGATTGACTGGTGCCAGTCGCGCGGTGAAGCGGTTATCGCCAGTCAGGACTGGCACCCGGCGAATCACGGCAGTTTTGCCAGTCAGCACGGTGTAGAGCCTTATACGCCAGGCCAACTCGACGGTTTGCCACAAACCTTCTGGCCAGATCACTGTGTGCAGAACAGTGAAGGCGCACAATTACATCCGTTACTGCACCAAAAAGCGATCGCAGCGGTGTTCCATAAAGGCGAAAATCCTTTAGTTGACAGTTACAGTGCCTTTTTTGATAACGGCCGTCGGCAGAAAACCTCTCTCGATGACTGGTTACGCGATCATGAAATCGATGAATTGATCGTTATGGGCCTGGCTACTGACTATTGCGTGAAGTTTACCGTGCTGGACGCGTTACAGTTAGGTTATAAGGTAAACGTGATTACCGATGGTTGTCGTGGCGTGAATATCCAGCCCCAGGACAGTGCGCACGCGTTTATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAA", - "dna_sequence_length": 642, - "functions": [ - "nicotinamidase/pyrazinamidase" - ], - "id": "CDS_1757", - "location": [ - [ - "NC_000913", - 1851887, - "+", - 642 - ] - ], - "md5": "08cb502195295dd33d13ffba5f776c7e", - "parent_gene": "", - "protein_md5": "b72c71c4ba0b75de6c308a8ccf4a4cbe", - "protein_translation": "MPPRALLLVDLQNDFCAGGALAVPEGDSTVDVANRLIDWCQSRGEAVIASQDWHPANHGSFASQHGVEPYTPGQLDGLPQTFWPDHCVQNSEGAQLHPLLHQKAIAAVFHKGENPLVDSYSAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFTVLDALQLGYKVNVITDGCRGVNIQPQDSAHAFMEMSAAGATLYTLADWEETQG", - "protein_translation_length": 213, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129723" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38055" - ], - [ - "gene_synonym", - "ASAP:ABE-0005894" - ], - [ - "gene_synonym", - "ECK1767" - ], - [ - "gene_synonym", - "GeneID:946274" - ], - [ - "gene_synonym", - "JW1758" - ], - [ - "gene_synonym", - "ydjE" - ], - [ - "gene_synonym", - "EcoGene:EG12369" - ], - [ - "gene_synonym", - "NP_416283.1" - ], - [ - "gene_synonym", - "b1769" - ] - ], - "dna_sequence": "ATGGAACAATATGATCAAATTGGCGCAAGACTGGACCGCTTGCCTTTGGCCCGGTTTCATTATCGTATATTTGGTATTATAAGCTTTAGTCTGTTATTAACAGGGTTTTTGAGTTACTCCGGTAATGTCGTCTTAGCAAAGCTGGTAAGCAATGGATGGTCAAATAATTTCCTCAATGCCGCCTTTACCTCGGCATTAATGTTTGGTTATTTCATCGGCTCACTTACTGGTGGGTTTATTGGTGACTACTTTGGGCGGCGCAGGGCGTTTCGCATAAATCTTCTCATCGTCGGTATTGCTGCAACAGGGGCCGCTTTTGTCCCTGATATGTACTGGCTCATCTTCTTTCGCTTCCTGATGGGAACAGGAATGGGGGCGCTGATTATGGTTGGCTATGCCTCATTTACGGAGTTTATCCCCGCGACGGTGCGTGGAAAATGGTCCGCGCGGCTCTCATTTGTTGGTAACTGGTCGCCCATGCTGTCTGCGGCGATAGGCGTGGTGGTTATCGCTTTTTTTAGTTGGCGAATAATGTTTCTGCTGGGTGGTATTGGCATACTGTTAGCCTGGTTTCTCTCAGGTAAATACTTTATCGAGTCGCCACGATGGCTGGCAGGGAAAGGGCAAATCGCAGGTGCAGAATGCCAACTTCGTGAAGTAGAGCAGCAAATTGAAAGAGAGAAGAGTATTCGTTTACCCCCGCTTACTTCGTATCAGAGCAACAGCAAGGTTAAAGTAATCAAGGGTACTTTCTGGCTCCTGTTTAAAGGTGAAATGTTACGACGTACATTAGTCGCGATTACTGTTTTAATTGCAATGAACATTTCGCTTTATACCATCACCGTATGGATACCGACCATATTTGTTAACTCCGGCATTGATGTCGATAAATCAATATTAATGACCGCTGTTATTATGATTGGCGCTCCGGTAGGAATATTTATTGCGGCATTAATTATTGATCATTTTCCTCGTCGGTTATTTGGCTCCACCTTACTTATTATTATTGCCGTGTTAGGCTATATCTATTCAATTCAGACTACAGAGTGGGCGATTTTAATCTATGGACTGGTGATGATCTTCTTTTTATACATGTATGTTTGCTTCGCGTCGGCGGTTTATATCCCGGAGCTTTGGCCAACGCATTTACGCCTGCGCGGTTCGGGTTTCGTTAATGCCGTCGGACGGATCGTCGCAGTCTTCACGCCCTATGGCGTTGCGGCATTATTAACACATTATGGGTCGATCACGGTGTTTATGGTACTTGGTGTTATGTTATTGCTCTGTGCGCTGGTTCTCTCCATTTTTGGCATCGAAACGCGGAAGGTGTCGTTGGAAGAGATTTCTGAGGTGAATTAA", - "dna_sequence_length": 1359, - "functions": [ - "putative MFS sugar transporter, membrane protein" - ], - "id": "CDS_1758", - "location": [ - [ - "NC_000913", - 1853979, - "-", - 1359 - ] - ], - "md5": "25db23ff2fe2f079a4a8cdced65c686b", - "parent_gene": "", - "protein_md5": "2014e76a6fe023cd3aa2265a6db7cdf6", - "protein_translation": "MEQYDQIGARLDRLPLARFHYRIFGIISFSLLLTGFLSYSGNVVLAKLVSNGWSNNFLNAAFTSALMFGYFIGSLTGGFIGDYFGRRRAFRINLLIVGIAATGAAFVPDMYWLIFFRFLMGTGMGALIMVGYASFTEFIPATVRGKWSARLSFVGNWSPMLSAAIGVVVIAFFSWRIMFLLGGIGILLAWFLSGKYFIESPRWLAGKGQIAGAECQLREVEQQIEREKSIRLPPLTSYQSNSKVKVIKGTFWLLFKGEMLRRTLVAITVLIAMNISLYTITVWIPTIFVNSGIDVDKSILMTAVIMIGAPVGIFIAALIIDHFPRRLFGSTLLIIIAVLGYIYSIQTTEWAILIYGLVMIFFLYMYVCFASAVYIPELWPTHLRLRGSGFVNAVGRIVAVFTPYGVAALLTHYGSITVFMVLGVMLLLCALVLSIFGIETRKVSLEEISEVN", - "protein_translation_length": 452, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416284.1" - ], - [ - "gene_synonym", - "ECK1768" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77721" - ], - [ - "gene_synonym", - "GI:16129724" - ], - [ - "gene_synonym", - "ASAP:ABE-0005897" - ], - [ - "gene_synonym", - "EcoGene:EG13482" - ], - [ - "gene_synonym", - "JW1759" - ], - [ - "gene_synonym", - "b1770" - ], - [ - "gene_synonym", - "ydjF" - ], - [ - "gene_synonym", - "GeneID:946272" - ] - ], - "dna_sequence": "GTGGCGGCAAAAGACAGGATTCAGGCAATTAAGCAAATGGTTGCCAACGATAAAAAGGTGACAGTCTCAAATTTGAGTGGGATTTTTCAGGTAACCGAAGAAACCATTCGCCGCGATCTTGAGAAGCTGGAAGATGAAGGCTTTTTGACCAGAACCTATGGTGGTGCTGTTTTAAATACAGCGATGTTGACGGAGAATATCCATTTTTATAAGCGCGCTTCATCGTTTTATGAAGAGAAGCAGCTTATTGCACGCAAGGCACTACCCTTTATCGACAATAAAACCACCATGGCAGCCGATTCCAGTAGTACCGTAATGGAATTGCTCAAATTGTTACAGGACCGTAGTGGCCTGACGTTGCTAACCAACTCGGCGGAAGCGATTCATGTTCTGGCTCAGTCAGAAATTAAAGTCGTTTCAACGGGTGGGGAACTAAACAAAAATACACTTTCACTGCAAGGAAGAATTACTAAAGAGATCATCAGGCGCTATCATGTCGATATCATGGTAATGAGTTGTAAAGGTCTTGATATTAACAGCGGCGCGCTGGACTCTAATGAAGCGGAAGCTGAAATCAAAAAGACAATGATCCGTCAGGCGACAGAAGTTGCGTTATTGGTTGATCACTCTAAGTTTGATCGCAAAGCTTTTGTCCAGTTAGCTGATTTTAGTCATATTAATTACATAATAACTGATAAATCACCGGGTGCAGAGTGGATAGCATTTTGCAAAGACAATAATATCCAGCTGGTGTGGTAA", - "dna_sequence_length": 759, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_1759", - "location": [ - [ - "NC_000913", - 1854854, - "-", - 759 - ] - ], - "md5": "ded82a0f38d9d06a3b2f85729d4c108b", - "parent_gene": "", - "protein_md5": "2f63e5b36ada8e2eceb5a64b53874fc3", - "protein_translation": "MAAKDRIQAIKQMVANDKKVTVSNLSGIFQVTEETIRRDLEKLEDEGFLTRTYGGAVLNTAMLTENIHFYKRASSFYEEKQLIARKALPFIDNKTTMAADSSSTVMELLKLLQDRSGLTLLTNSAEAIHVLAQSEIKVVSTGGELNKNTLSLQGRITKEIIRRYHVDIMVMSCKGLDINSGALDSNEAEAEIKKTMIRQATEVALLVDHSKFDRKAFVQLADFSHINYIITDKSPGAEWIAFCKDNNIQLVW", - "protein_translation_length": 252, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77256" - ], - [ - "gene_synonym", - "EcoGene:EG13483" - ], - [ - "gene_synonym", - "ECK1769" - ], - [ - "gene_synonym", - "GI:16129725" - ], - [ - "gene_synonym", - "NP_416285.1" - ], - [ - "gene_synonym", - "JW1760" - ], - [ - "gene_synonym", - "ASAP:ABE-0005901" - ], - [ - "gene_synonym", - "ydjG" - ], - [ - "gene_synonym", - "b1771" - ], - [ - "gene_synonym", - "GeneID:946283" - ] - ], - "dna_sequence": "ATGAAAAAGATACCTTTAGGCACAACGGATATTACGCTTTCGCGAATGGGGTTGGGGACATGGGCCATTGGCGGCGGTCCTGCATGGAATGGCGATCTCGATCGGCAAATATGTATTGATACGATTCTTGAAGCCCATCGTTGTGGCATTAATCTGATTGATACTGCGCCAGGATATAACTTTGGCAATAGTGAAGTTATCGTCGGTCAGGCGTTAAAAAAACTGCCCCGTGAACAGGTTGTAGTAGAAACCAAATGCGGCATTGTCTGGGAACGAAAAGGAAGTTTATTCAACAAAGTTGGCGATCGGCAGTTGTATAAAAACCTTTCCCCGGAATCTATCCGCGAAGAGGTAGCAGCGAGCTTGCAACGTCTGGGTATTGATTACATCGATATCTACATGACGCACTGGCAGTCGGTGCCGCCATTTTTTACGCCGATCGCTGAAACTGTCGCAGTGCTTAATGAGTTAAAGTCTGAAGGGAAAATTCGCGCTATAGGCGCTGCTAACGTCGATGCTGACCATATCCGCGAGTATCTGCAATATGGTGAACTGGATATTATTCAGGCGAAATACAGTATCCTCGACCGGGCAATGGAAAACGAACTGCTGCCACTATGTCGTGATAATGGCATTGTGGTTCAGGTTTATTCCCCGCTAGAGCAGGGATTGTTGACCGGCACCATCACTCGTGATTACGTTCCGGGCGGCGCTCGGGCAAATAAAGTCTGGTTCCAGCGTGAAAACATGCTGAAAGTGATTGATATGCTTGAACAGTGGCAGCCACTTTGTGCTCGTTATCAGTGCACAATTCCCACTCTGGCACTGGCGTGGATATTAAAACAGAGTGATTTAATCTCCATTCTTAGTGGGGCTACTGCACCGGAACAGGTACGCGAAAATGTCGCGGCACTGAATATCAACTTATCGGATGCAGACGCAACATTGATGAGGGAAATGGCAGAGGCCCTGGAGCGTTAA", - "dna_sequence_length": 981, - "functions": [ - "methylglyoxal reductase, NADH-dependent" - ], - "id": "CDS_1760", - "location": [ - [ - "NC_000913", - 1855971, - "-", - 981 - ] - ], - "md5": "ea8eaafffebd75106bd1d9c21ec4abdc", - "parent_gene": "", - "protein_md5": "aa098f923ce386ef6525b8bdd915552f", - "protein_translation": "MKKIPLGTTDITLSRMGLGTWAIGGGPAWNGDLDRQICIDTILEAHRCGINLIDTAPGYNFGNSEVIVGQALKKLPREQVVVETKCGIVWERKGSLFNKVGDRQLYKNLSPESIREEVAASLQRLGIDYIDIYMTHWQSVPPFFTPIAETVAVLNELKSEGKIRAIGAANVDADHIREYLQYGELDIIQAKYSILDRAMENELLPLCRDNGIVVQVYSPLEQGLLTGTITRDYVPGGARANKVWFQRENMLKVIDMLEQWQPLCARYQCTIPTLALAWILKQSDLISILSGATAPEQVRENVAALNINLSDADATLMREMAEALER", - "protein_translation_length": 326, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13484" - ], - [ - "gene_synonym", - "GI:90111328" - ], - [ - "gene_synonym", - "ECK1770" - ], - [ - "gene_synonym", - "JW5289" - ], - [ - "gene_synonym", - "ASAP:ABE-0005903" - ], - [ - "gene_synonym", - "b1772" - ], - [ - "gene_synonym", - "NP_416286.4" - ], - [ - "gene_synonym", - "ydjH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77493" - ], - [ - "gene_synonym", - "GeneID:946285" - ] - ], - "dna_sequence": "ATGGATAATCTCGACGTTATTTGTATAGGTGCCGCTATTGTTGATATTCCATTGCAACCGGTCAGTAAAAATATCTTTGATGTGGATTCTTATCCTCTTGAAAGAATCGCAATGACCACCGGGGGTGATGCAATAAATGAAGCAACAATTATTTCTCGTCTGGGCCATCGCACAGCATTAATGAGTCGTATTGGTAAAGATGCCGCAGGGCAATTTATTCTCGACCATTGCCGCAAAGAGAATATTGATATTCAAAGCCTGAAGCAGGACGTCAGCATAGATACCTCTATTAACGTTGGACTGGTGACGGAGGATGGCGAGCGGACGTTTGTCACAAACCGTAATGGCAGTCTGTGGAAATTGAATATTGACGATGTTGATTTTGCGCGGTTTTCTCAGGCGAAATTATTATCACTGGCCAGTATTTTCAACAGTCCACTATTGGATGGTAAAGCGCTAACAGAAATTTTTACGCAAGCTAAAGCCCGGCAGATGATTATCTGTGCCGATATGATCAAACCGCGGTTGAATGAAACGCTGGATGATATTTGCGAAGCATTGAGTTATGTCGATTATCTGTTTCCTAATTTTGCCGAGGCAAAATTACTCACCGGGAAAGAGACACTGGATGAAATTGCTGACTGCTTTCTTGCGTGCGGCGTAAAAACGGTGGTGATTAAAACGGGTAAAGACGGCTGCTTTATCAAGCGTGGTGACATGACGATGAAGGTGCCGGCGGTCGCAGGAATAACCGCCATCGACACCATTGGCGCGGGCGATAACTTTGCTTCAGGTTTTATTGCGGCACTGTTAGAAGGCAAAAATCTGCGTGAATGCGCACGCTTTGCCAATGCAACGGCGGCTATCTCGGTTCTAAGCGTCGGTGCCACCACCGGCGTAAAAAACAGAAAGCTGGTCGAACAATTGCTGGAAGAATACGAAGGATAA", - "dna_sequence_length": 948, - "functions": [ - "putative kinase" - ], - "id": "CDS_1761", - "location": [ - [ - "NC_000913", - 1856928, - "-", - 948 - ] - ], - "md5": "5a9509085404f36b7d92b51ea798197d", - "parent_gene": "", - "protein_md5": "3211e9f12703007aa8e6332f1d33d7b3", - "protein_translation": "MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG", - "protein_translation_length": 315, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129727" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77704" - ], - [ - "gene_synonym", - "ECK1771" - ], - [ - "gene_synonym", - "JW1762" - ], - [ - "gene_synonym", - "ASAP:ABE-0005906" - ], - [ - "gene_synonym", - "b1773" - ], - [ - "gene_synonym", - "ydjI" - ], - [ - "gene_synonym", - "EcoGene:EG13485" - ], - [ - "gene_synonym", - "GeneID:946291" - ], - [ - "gene_synonym", - "NP_416287.1" - ] - ], - "dna_sequence": "ATGCTCGCAGATATCAGATATTGGGAAAACGATGCCACAAATAAACATTATGCAATTGCCCATTTTAACGTATGGAATGCAGAAATGTTGATGGGCGTTATCGACGCAGCCGAAGAAGCGAAATCCCCGGTTATTATTTCTTTTGGTACAGGTTTTGTCGGTAACACCTCATTTGAAGATTTCTCTCACATGATGGTATCAATGGCACAAAAAGCAACGGTGCCGGTAATAACTCATTGGGATCATGGTCGGAGTATGGAGATTATTCATAACGCCTGGACTCATGGTATGAATTCATTAATGCGTGATGCTTCCGCGTTTGATTTCGAAGAAAATATTCGTTTAACCAAAGAGGCTGTCGATTTCTTCCATCCGCTGGGTATTCCGGTAGAGGCGGAATTAGGGCATGTCGGTAATGAAACCGTTTATGAGGAAGCGCTGGCGGGCTATCACTATACCGATCCTGACCAGGCGGCTGAATTTGTTGAACGTACGGGCTGTGATTCATTGGCTGTCGCCATCGGCAACCAGCATGGGGTTTATACGTCAGAGCCACAATTGAACTTTGAGGTCGTCAAACGCGTACGCGATGCCGTTTCTGTTCCGCTGGTTTTGCACGGTGCATCGGGGATCAGTGATGCCGACATTAAAACTGCAATTTCGTTGGGTATCGCGAAAATCAACATTCATACGGAGCTCTGTCAGGCCGCAATGGTTGCAGTGAAAGAAAACCAGGATCAGCCTTTCCTGCATTTAGAACGTGAAGTACGTAAAGCTGTAAAAGAACGGGCATTGGAAAAAATTAAACTGTTCGGTTCTGATGGCAAAGCGGAATAA", - "dna_sequence_length": 837, - "functions": [ - "putative aldolase" - ], - "id": "CDS_1762", - "location": [ - [ - "NC_000913", - 1857769, - "-", - 837 - ] - ], - "md5": "77bc8677a56c5a95003eea5d4df4ab97", - "parent_gene": "", - "protein_md5": "d2fd2b8c192f1a528cdd62d2815dd150", - "protein_translation": "MLADIRYWENDATNKHYAIAHFNVWNAEMLMGVIDAAEEAKSPVIISFGTGFVGNTSFEDFSHMMVSMAQKATVPVITHWDHGRSMEIIHNAWTHGMNSLMRDASAFDFEENIRLTKEAVDFFHPLGIPVEAELGHVGNETVYEEALAGYHYTDPDQAAEFVERTGCDSLAVAIGNQHGVYTSEPQLNFEVVKRVRDAVSVPLVLHGASGISDADIKTAISLGIAKINIHTELCQAAMVAVKENQDQPFLHLEREVRKAVKERALEKIKLFGSDGKAE", - "protein_translation_length": 278, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13486" - ], - [ - "gene_synonym", - "GI:16129728" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77280" - ], - [ - "gene_synonym", - "JW1763" - ], - [ - "gene_synonym", - "ECK1772" - ], - [ - "gene_synonym", - "b1774" - ], - [ - "gene_synonym", - "NP_416288.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0005908" - ], - [ - "gene_synonym", - "ydjJ" - ], - [ - "gene_synonym", - "GeneID:946292" - ] - ], - "dna_sequence": "ATGAAAAATTCAAAAGCAATATTGCAGGTGCCGGGCACAATGAAAATTATTTCAGCAGAAATACCAGTGCCTAAAGAAGATGAAGTTTTGATTAAAGTAGAATATGTCGGTATTTGTGGTTCAGATGTACATGGTTTTGAATCAGGCCCGTTTATTCCGCCTAAAGACCCAAATCAAGAAATTGGCCTGGGTCATGAATGCGCCGGGACGGTTGTGGCTGTGGGAAGCCGCGTGCGCAAATTTAAACCGGGGGATCGGGTAAATATCGAACCTGGCGTTCCTTGCGGTCACTGTCGTTACTGTCTGGAAGGCAAATATAACATCTGCCCGGACGTTGATTTTATGGCGACACAACCCAACTACCGCGGCGCATTAACGCACTATCTGTGTCATCCGGAGAGCTTTACTTACAAACTGCCCGACAATATGGACACGATGGAAGGGGCGCTGGTGGAGCCTGCCGCAGTCGGGATGCATGCCGCGATGCTGGCAGATGTTAAACCGGGTAAGAAGATAATTATTCTGGGAGCAGGTTGTATTGGTTTGATGACGTTGCAAGCGTGCAAATGCCTGGGAGCAACGGAAATTGCCGTCGTTGATGTGCTGGAAAAACGTCTGGCAATGGCGGAACAGCTTGGTGCGACAGTGGTTATTAACGGCGCAAAAGAAGACACTATTGCACGCTGTCAGCAATTTACCGAAGACATGGGCGCAGATATTGTTTTCGAAACAGCGGGTTCTGCGGTCACCGTTAAACAGGCACCTTATCTGGTAATGCGCGGCGGTAAAATTATGATTGTTGGTACTGTACCCGGCGATTCGGCAATCAATTTCCTCAAAATCAATCGCGAAGTCACTATCCAGACGGTATTCCGCTATGCCAATCGTTATCCGGTCACGATTGAAGCTATTTCTTCAGGGCGATTCGATGTGAAATCGATGGTGACGCATATTTACGATTATCGGGATGTACAACAGGCATTTGAAGAGTCAGTTAACAACAAACGCGACATTATTAAAGGCGTTATTAAAATTAGCGATTAA", - "dna_sequence_length": 1044, - "functions": [ - "putative Zn-dependent NAD(P)-binding oxidoreductase" - ], - "id": "CDS_1763", - "location": [ - [ - "NC_000913", - 1858833, - "-", - 1044 - ] - ], - "md5": "01d9507011748c87b72176c1d7b4648a", - "parent_gene": "", - "protein_md5": "abd51811b98e2c73a93bd48a06dc0eef", - "protein_translation": "MKNSKAILQVPGTMKIISAEIPVPKEDEVLIKVEYVGICGSDVHGFESGPFIPPKDPNQEIGLGHECAGTVVAVGSRVRKFKPGDRVNIEPGVPCGHCRYCLEGKYNICPDVDFMATQPNYRGALTHYLCHPESFTYKLPDNMDTMEGALVEPAAVGMHAAMLADVKPGKKIIILGAGCIGLMTLQACKCLGATEIAVVDVLEKRLAMAEQLGATVVINGAKEDTIARCQQFTEDMGADIVFETAGSAVTVKQAPYLVMRGGKIMIVGTVPGDSAINFLKINREVTIQTVFRYANRYPVTIEAISSGRFDVKSMVTHIYDYRDVQQAFEESVNNKRDIIKGVIKISD", - "protein_translation_length": 347, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5290" - ], - [ - "gene_synonym", - "EcoGene:EG13487" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76230" - ], - [ - "gene_synonym", - "GI:16129729" - ], - [ - "gene_synonym", - "ECK1773" - ], - [ - "gene_synonym", - "NP_416289.1" - ], - [ - "gene_synonym", - "b1775" - ], - [ - "gene_synonym", - "ASAP:ABE-0005910" - ], - [ - "gene_synonym", - "ydjK" - ], - [ - "gene_synonym", - "GeneID:946293" - ] - ], - "dna_sequence": "ATGGAACAGATAACAAAACCGCATTGTGGTGCACGGCTGGATCGCTTACCGGATTGCCGCTGGCATTCATCAATGTTTGCCATCGTCGCGTTTGGCTTGCTTGTCTGCTGGAGTAATGCCGTTGGTGGCTTGATCCTCGCGCAGCTGAAAGCGTTGGGCTGGACAGATAATTCCACCACAGCCACATTCTCAGCAATCACGACCGCCGGAATGTTTCTCGGTGCGCTGGTGGGCGGCATCATTGGCGACAAAACCGGTCGCAGAAATGCGTTCATCCTCTATGAGGCCATTCATATTGCCTCGATGGTTGTCGGTGCTTTCTCACCGAATATGGATTTCCTTATTGCCTGCCGTTTTGTGATGGGAGTTGGGCTGGGAGCTTTACTGGTTACGCTGTTTGCTGGTTTCACCGAATATATGCCCGGTAGAAATCGTGGAACGTGGTCAAGTCGGGTTTCCTTTATTGGCAACTGGTCATATCCGCTCTGTTCATTGATAGCGATGGGACTCACGCCGCTGATTAGTGCAGAGTGGAACTGGCGGGTACAACTGCTTATCCCTGCAATATTGTCGCTTATCGCTACGGCGCTGGCCTGGCGCTACTTTCCTGAATCCCCGCGCTGGCTGGAATCGCGCGGACGGTATCAGGAAGCCGAGAAAGTCATGCGGAGTATAGAAGAAGGCGTCATACGCCAGACGGGTAAACCTTTGCCGCCTGTGGTTATTGCTGATGACGGTAAAGCGCCACAAGCGGTGCCGTATTCAGCCTTACTGACAGGAGTATTACTGAAACGCGTGATATTAGGCTCTTGTGTGCTGATTGCCATGAACGTTGTGCAGTACACACTAATTAACTGGTTGCCAACAATATTCATGACCCAGGGGATTAATTTAAAAGACTCGATTGTTTTAAATACCATGAGTATGTTTGGCGCGCCATTTGGTATTTTTATTGCCATGCTGGTGATGGATAAAATTCCGCGTAAAACAATGGGTGTGGGGCTATTAATCCTGATTGCGGTGCTCGGATATATCTATTCACTGCAAACCAGTATGTTGCTCATAACGTTGATTGGTTTCTTCCTGATTACTTTCGTCTATATGTACGTTTGCTATGCCTCGGCAGTGTATGTCCCTGAAATCTGGCCGACAGAGGCCAAACTCCGTGGCTCCGGTCTGGCGAATGCGGTAGGGCGAATCAGTGGTATTGCCGCACCTTATGCCGTTGCAGTGCTGCTCAGTAGTTATGGCGTTACGGGAGTCTTTATTCTTCTGGGGGCGGTTTCAATTATTGTCGCAATTGCTATCGCCACCATTGGAATCGAAACCAAAGGTGTCTCCGTTGAAAGTTTAAGTATTGATGCAGTAGCCAATAAATAA", - "dna_sequence_length": 1380, - "functions": [ - "putative MFS sugar transporter, membrane protein" - ], - "id": "CDS_1764", - "location": [ - [ - "NC_000913", - 1860229, - "-", - 1380 - ] - ], - "md5": "f8de9cdae1a291b5e2abfb62b2e4cd68", - "parent_gene": "", - "protein_md5": "3b8d04b82693c4a37fc7e27dd7defe60", - "protein_translation": "MEQITKPHCGARLDRLPDCRWHSSMFAIVAFGLLVCWSNAVGGLILAQLKALGWTDNSTTATFSAITTAGMFLGALVGGIIGDKTGRRNAFILYEAIHIASMVVGAFSPNMDFLIACRFVMGVGLGALLVTLFAGFTEYMPGRNRGTWSSRVSFIGNWSYPLCSLIAMGLTPLISAEWNWRVQLLIPAILSLIATALAWRYFPESPRWLESRGRYQEAEKVMRSIEEGVIRQTGKPLPPVVIADDGKAPQAVPYSALLTGVLLKRVILGSCVLIAMNVVQYTLINWLPTIFMTQGINLKDSIVLNTMSMFGAPFGIFIAMLVMDKIPRKTMGVGLLILIAVLGYIYSLQTSMLLITLIGFFLITFVYMYVCYASAVYVPEIWPTEAKLRGSGLANAVGRISGIAAPYAVAVLLSSYGVTGVFILLGAVSIIVAIAIATIGIETKGVSVESLSIDAVANK", - "protein_translation_length": 459, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129730" - ], - [ - "gene_synonym", - "ECK1774" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77539" - ], - [ - "gene_synonym", - "EcoGene:EG13488" - ], - [ - "gene_synonym", - "b1776" - ], - [ - "gene_synonym", - "JW1765" - ], - [ - "gene_synonym", - "GeneID:946299" - ], - [ - "gene_synonym", - "ASAP:ABE-0005912" - ], - [ - "gene_synonym", - "NP_416290.1" - ], - [ - "gene_synonym", - "ydjL" - ] - ], - "dna_sequence": "ATGAAAGCACTGGCTCGGTTTGGCAAGGCCTTTGGCGGCTACAAGATGATTGATGTCCCACAACCCATGTGTGGCCCGGAAGATGTAGTGATTGAAATTAAAGCCGCGGCAATCTGCGGCGCAGACATGAAGCACTACAATGTCGATAGCGGTTCTGATGAGTTTAACTCTATCCGCGGCCATGAGTTCGCAGGTTGTATTGCGCAGGTTGGTGAAAAAGTCAAAGACTGGAAAGTGGGGCAACGCGTCGTATCGGATAACAGCGGTCACGTTTGCGGTGTTTGTCCGGCCTGTGAACAAGGTGATTTTCTGTGTTGTACAGAAAAAGTAAACCTTGGTCTGGATAATAATACCTGGGGCGGTGGTTTTTCCAAATATTGTCTGGTTCCTGGTGAAATTCTCAAAATTCATCGTCATGCGTTGTGGGAAATCCCTGATGGTGTTGATTATGAGGACGCAGCCGTACTTGACCCTATCTGTAATGCCTACAAATCCATCGCGCAGCAATCGAAATTCCTTCCTGGTCAGGATGTGGTCGTCATCGGCACTGGCCCACTCGGGCTGTTCTCCGTACAAATGGCGCGAATTATGGGGGCGGTAAATATCGTCGTCGTTGGTCTGCAAGAAGATGTGGCGGTCCGCTTCCCGGTTGCAAAAGAACTGGGTGCGACGGCAGTAGTAAATGGTTCTACCGAAGATGTGGTGGCGCGCTGCCAGCAAATTTGTGGCAAAGACAATCTGGGACTGGTGATTGAATGCTCCGGTGCCAATATCGCACTGAAACAAGCCATCGAAATGCTCCGCCCGAACGGGGAAGTGGTACGCGTTGGAATGGGCTTCAAACCTCTTGATTTCTCGATTAATGACATTACCGCCTGGAACAAAAGCATCATTGGGCATATGGCCTATGACTCCACCTCATGGCGTAACGCTATCAGGCTATTAGCCAGCGGCGCTATCAAAGTCAAACCGATGATCACGCATCGTATCGGCCTGTCGCAATGGCGCGAAGGGTTTGATGCGATGGTCGATAAAACCGCAATCAAAGTGATCATGACTTACGACTTTGATGAATAA", - "dna_sequence_length": 1077, - "functions": [ - "putative Zn-dependent NAD(P)-binding oxidoreductase" - ], - "id": "CDS_1765", - "location": [ - [ - "NC_000913", - 1861332, - "-", - 1077 - ] - ], - "md5": "eea41cf94fae265ad700b77e22ab4a73", - "parent_gene": "", - "protein_md5": "17a43151260d66138bdb48ce4802cdbf", - "protein_translation": "MKALARFGKAFGGYKMIDVPQPMCGPEDVVIEIKAAAICGADMKHYNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPICNAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELGATAVVNGSTEDVVARCQQICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRVGMGFKPLDFSINDITAWNKSIIGHMAYDSTSWRNAIRLLASGAIKVKPMITHRIGLSQWREGFDAMVDKTAIKVIMTYDFDE", - "protein_translation_length": 358, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76231" - ], - [ - "gene_synonym", - "yeaC" - ], - [ - "gene_synonym", - "GI:90111329" - ], - [ - "gene_synonym", - "ECK1775" - ], - [ - "gene_synonym", - "EcoGene:EG13489" - ], - [ - "gene_synonym", - "b1777" - ], - [ - "gene_synonym", - "JW1766" - ], - [ - "gene_synonym", - "GeneID:947074" - ], - [ - "gene_synonym", - "NP_416291.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0005914" - ] - ], - "dna_sequence": "ATGAATCTTGATGACATTATCAACAGCATGATGCCTGAGGTATACCAGCGTTTGTCGACCGCCGTTGAACTGGGGAAATGGCCTGATGGCGTTGCGTTGACCGAGGAACAAAAAGAGAACTGCCTGCAACTGGTGATGCTGTGGCAAGCCCGCCATAATATCGAAGCACAGCATATGACAATTGACACAAATGGTCAGATGGTCATGAAGAGCAAACAGCAGTTAAAAGAAGATTTTGGTATCTCAGCAAAGCCTATTGCCATGTTTAAGTAA", - "dna_sequence_length": 273, - "functions": [ - "DUF1315 family protein" - ], - "id": "CDS_1766", - "location": [ - [ - "NC_000913", - 1861974, - "-", - 273 - ] - ], - "md5": "669d64dc348bdb6169c8a2633ad5b094", - "parent_gene": "", - "protein_md5": "fc2ab03840b63343b9e444654223b798", - "protein_translation": "MNLDDIINSMMPEVYQRLSTAVELGKWPDGVALTEEQKENCLQLVMLWQARHNIEAQHMTIDTNGQMVMKSKQQLKEDFGISAKPIAMFK", - "protein_translation_length": 90, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129732" - ], - [ - "gene_synonym", - "yeaA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A746" - ], - [ - "gene_synonym", - "NP_416292.1" - ], - [ - "gene_synonym", - "ECK1776" - ], - [ - "gene_synonym", - "msrB" - ], - [ - "gene_synonym", - "GeneID:947188" - ], - [ - "gene_synonym", - "ASAP:ABE-0005916" - ], - [ - "gene_synonym", - "JW1767" - ], - [ - "gene_synonym", - "EcoGene:EG12394" - ], - [ - "gene_synonym", - "b1778" - ] - ], - "dna_sequence": "ATGGCTAATAAACCTTCGGCAGAAGAACTGAAAAAAAATTTGTCCGAGATGCAGTTTTACGTGACGCAGAATCATGGGACAGAGCCGCCATTTACGGGTCGTTTACTGCATAACAAGCGTGACGGCGTATATCACTGTTTGATCTGCGATGCCCCGCTGTTTCATTCCCAAACCAAGTATGATTCCGGCTGTGGCTGGCCCAGTTTCTACGAACCGGTAAGTGAAGAATCCATTCGTTATATCAAAGACTTGTCACATGGAATGCAGCGCATAGAAATTCGTTGCGGTAACTGTGATGCCCATCTGGGGCATGTCTTCCCCGACGGGCCGCAGCCAACGGGCGAACGTTATTGTGTTAACTCTGCCTCTTTACGCTTTACCGATGGCGAAAACGGCGAAGAAATCAACGGTTGA", - "dna_sequence_length": 414, - "functions": [ - "methionine sulfoxide reductase B" - ], - "id": "CDS_1767", - "location": [ - [ - "NC_000913", - 1862429, - "-", - 414 - ] - ], - "md5": "209ebce79123186fab663d742aa6e88b", - "parent_gene": "", - "protein_md5": "acca6325d1d2cdeab1f6106e3f4038c3", - "protein_translation": "MANKPSAEELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVYHCLICDAPLFHSQTKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHLGHVFPDGPQPTGERYCVNSASLRFTDGENGEEING", - "protein_translation_length": 137, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "gapA" - ], - [ - "gene_synonym", - "GI:16129733" - ], - [ - "gene_synonym", - "GeneID:947679" - ], - [ - "gene_synonym", - "ASAP:ABE-0005920" - ], - [ - "gene_synonym", - "ECK1777" - ], - [ - "gene_synonym", - "NP_416293.1" - ], - [ - "gene_synonym", - "JW1768" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9B2" - ], - [ - "gene_synonym", - "EcoGene:EG10367" - ], - [ - "gene_synonym", - "b1779" - ] - ], - "dna_sequence": "ATGACTATCAAAGTAGGTATCAACGGTTTTGGCCGTATCGGTCGCATTGTTTTCCGTGCTGCTCAGAAACGTTCTGACATCGAGATCGTTGCAATCAACGACCTGTTAGACGCTGATTACATGGCATACATGCTGAAATATGACTCCACTCACGGCCGTTTCGACGGTACCGTTGAAGTGAAAGACGGTCATCTGATCGTTAACGGTAAAAAAATCCGTGTTACCGCTGAACGTGATCCGGCTAACCTGAAATGGGACGAAGTTGGTGTTGACGTTGTCGCTGAAGCAACTGGTCTGTTCCTGACTGACGAAACTGCTCGTAAACACATCACCGCTGGTGCGAAGAAAGTGGTTATGACTGGTCCGTCTAAAGACAACACTCCGATGTTCGTTAAAGGCGCTAACTTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATCATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAGAACATCATCCCGTCCTCTACCGGTGCTGCTAAAGCTGTAGGTAAAGTACTGCCAGAACTGAATGGCAAACTGACTGGTATGGCGTTCCGCGTTCCGACCCCGAACGTATCTGTAGTTGACCTGACCGTTCGTCTGGAAAAAGCTGCAACTTACGAGCAGATCAAAGCTGCCGTTAAAGCTGCTGCTGAAGGCGAAATGAAAGGCGTTCTGGGCTACACCGAAGATGACGTAGTATCTACCGATTTCAACGGCGAAGTTTGCACTTCCGTGTTCGATGCTAAAGCTGGTATCGCTCTGAACGACAACTTCGTGAAACTGGTATCCTGGTACGACAACGAAACCGGTTACTCCAACAAAGTTCTGGACCTGATCGCTCACATCTCCAAATAA", - "dna_sequence_length": 996, - "functions": [ - "glyceraldehyde-3-phosphate dehydrogenase A" - ], - "id": "CDS_1768", - "location": [ - [ - "NC_000913", - 1862771, - "+", - 996 - ] - ], - "md5": "542eeddf9e93ab3449d8992044a018f8", - "parent_gene": "", - "protein_md5": "adec9c8c296a076912033969d932bc85", - "protein_translation": "MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK", - "protein_translation_length": 331, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yeaD" - ], - [ - "gene_synonym", - "ECK1778" - ], - [ - "gene_synonym", - "GI:90111330" - ], - [ - "gene_synonym", - "EcoGene:EG12679" - ], - [ - "gene_synonym", - "yzzQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0005923" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39173" - ], - [ - "gene_synonym", - "GeneID:946572" - ], - [ - "gene_synonym", - "JW1769" - ], - [ - "gene_synonym", - "NP_416294.4" - ], - [ - "gene_synonym", - "b1780" - ] - ], - "dna_sequence": "ATGATTAAGAAAATTTTTGCCCTTCCGGTCATCGAACAAATCTCCCCTGTCCTCTCCCGTCGTAAACTGGATGAACTGGACCTCATTGTGGTCGATCATCCCCAGGTAAAAGCCTCTTTTGCATTACAGGGCGCACACCTTCTCTCGTGGAAACCTGCGGGTGAAGAAGAAGTTCTGTGGTTGAGCAACAACACACCGTTCAAAAATGGCGTCGCTATTCGCGGTGGCGTACCGGTTTGCTGGCCGTGGTTTGGTCCGGCGGCACAACAAGGTCTGCCTGCGCACGGTTTTGCCCGCAACCTGCCGTGGACGCTGAAATCACATCATGAAGATGCTGATGGCGTAGCGCTGACTTTTGAATTGACGCAAAGCGAAGAGACGAAAAAATTCTGGCCGCACGACTTTACGCTGTTAGCGCATTTCCGCGTGGGTAAAACTTGTGAAATCGATCTTGAATCACATGGCGAATTTGAAACCACCTCTGCCCTGCATACCTACTTTAACGTGGGTGATATCGCTAAGGTAAGCGTCAGTGGGCTGGGCGATCGCTTCATTGATAAAGTGAATGACGCGAAAGAAAATGTACTGACCGATGGTATTCAGACCTTCCCTGACCGTACCGATCGCGTGTATCTGAATCCACAAGATTGCAGCGTGATTAATGATGAAGCGCTGAATCGTATTATCGCCGTAGGCCACCAGCATCATCTGAACGTTGTCGGCTGGAACCCGGGACCGGCGCTTTCAATTAGCATGGGCGATATGCCGGATGATGGCTACAAAACATTTGTTTGTGTAGAAACGGCTTACGCTTCAGAAACGCAAAAAGTGACCAAAGAGAAACCTGCACATCTGGCGCAATCCATTCGCGTTGCGAAACGTTAA", - "dna_sequence_length": 885, - "functions": [ - "D-hexose-6-phosphate epimerase-like protein" - ], - "id": "CDS_1769", - "location": [ - [ - "NC_000913", - 1863850, - "+", - 885 - ] - ], - "md5": "78b305e1b8709d7649f7e6f1c3b61a50", - "parent_gene": "", - "protein_md5": "16b312fec87b0fba3087d72530affc71", - "protein_translation": "MIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSHHEDADGVALTFELTQSEETKKFWPHDFTLLAHFRVGKTCEIDLESHGEFETTSALHTYFNVGDIAKVSVSGLGDRFIDKVNDAKENVLTDGIQTFPDRTDRVYLNPQDCSVINDEALNRIIAVGHQHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETAYASETQKVTKEKPAHLAQSIRVAKR", - "protein_translation_length": 294, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yeaE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76234" - ], - [ - "gene_synonym", - "ECK1779" - ], - [ - "gene_synonym", - "GI:16129735" - ], - [ - "gene_synonym", - "ASAP:ABE-0005925" - ], - [ - "gene_synonym", - "GeneID:946302" - ], - [ - "gene_synonym", - "NP_416295.1" - ], - [ - "gene_synonym", - "JW1770" - ], - [ - "gene_synonym", - "b1781" - ], - [ - "gene_synonym", - "EcoGene:EG13491" - ] - ], - "dna_sequence": "ATGCAACAAAAAATGATTCAATTTAGTGGCGATGTCTCACTGCCAGCCGTAGGGCAGGGAACATGGTATATGGGCGAAGATGCCAGTCAGCGCAAAACAGAAGTTGCTGCACTACGCGCGGGCATTGAACTCGGTTTAACCCTCATTGATACCGCCGAAATGTATGCCGATGGCGGTGCCGAAAAGGTGGTTGGGGAAGCATTAACCGGTCTGCGAGAGAAGGTCTTTCTCGTCTCTAAAGTCTATCCGTGGAATGCTGGCGGGCAAAAAGCGATAAATGCATGCGAAGCCAGTTTACGCCGTCTCAATACTGATTATCTCGATCTTTACTTATTACACTGGTCTGGCAGTTTCGCTTTTGAAGAGACTGTCGCAGCGATGGAAAAATTGATCGCCCAGGGAAAAATCCGCCGCTGGGGCGTTTCTAACCTTGATTATGCTGATATGCAGGAACTCTGGCAGCTGCCGGGGGGAAATCAGTGTGCCACTAATCAGGTGCTTTACCATCTCGGTTCACGAGGAATTGAGTACGATCTACTCCCCTGGTGCCAGCAACAGCAGATGCCGGTGATGGCTTACAGTCCGTTAGCCCAGGCCGGGCGGTTGCGCAATGGACTGTTAAAAAACGCGGTAGTCAACGAAATTGCACATGCTCACAATATCAGCGCGGCACAAGTATTGTTGGCGTGGGTGATCAGTCATCAGGGTGTGATGGCGATTCCAAAAGCGGCCACGATTGCCCATGTCCAACAAAATGCGGCTGTGCTTGAGGTCGAACTTTCTTCAGCGGAATTAGCTATGCTGGATAAGGCATATCCGGCACCAAAAGGAAAAACTGCGCTGGATATGGTGTGA", - "dna_sequence_length": 855, - "functions": [ - "aldo-keto reductase, methylglyoxal to acetol, NADPH-dependent" - ], - "id": "CDS_1770", - "location": [ - [ - "NC_000913", - 1865636, - "-", - 855 - ] - ], - "md5": "a6c4f3d5aed6f1d76a1d76824a2bb665", - "parent_gene": "", - "protein_md5": "e7680b763945dee83ec1dd7660258d1e", - "protein_translation": "MQQKMIQFSGDVSLPAVGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGLREKVFLVSKVYPWNAGGQKAINACEASLRRLNTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQCATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHAHNISAAQVLLAWVISHQGVMAIPKAATIAHVQQNAAVLEVELSSAELAMLDKAYPAPKGKTALDMV", - "protein_translation_length": 284, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yeaF" - ], - [ - "gene_synonym", - "ECK1780" - ], - [ - "gene_synonym", - "GI:16129736" - ], - [ - "gene_synonym", - "GeneID:946301" - ], - [ - "gene_synonym", - "EcoGene:EG13492" - ], - [ - "gene_synonym", - "mipA" - ], - [ - "gene_synonym", - "NP_416296.1" - ], - [ - "gene_synonym", - "JW1771" - ], - [ - "gene_synonym", - "ASAP:ABE-0005928" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A908" - ], - [ - "gene_synonym", - "b1782" - ] - ], - "dna_sequence": "GTGACCAAACTCAAACTTCTGGCACTTGGAGTGCTTATCGCAACGTCTGCAGGCGTAGCGCACGCTGAAGGTAAATTTTCCCTGGGCGCAGGCGTAGGTGTCGTTGAACACCCATATAAAGATTACGATACCGATGTTTACCCAGTACCGGTAATCAACTATGAAGGCGATAACTTCTGGTTCCGTGGCTTAGGTGGTGGTTACTACCTGTGGAATGACGCAACGGATAAACTTTCAATTACCGCTTACTGGTCGCCGCTTTACTTCAAAGCGAAAGACAGTGGCGATCACCAAATGCGTCACCTGGATGACCGTAAGAGCACCATGATGGCTGGTCTGTCTTATGCTCACTTTACCCAGTACGGTTACCTGCGTACCACCCTGGCTGGCGATACCCTGGATAACAGCAACGGCATCGTCTGGGATATGGCCTGGTTGTATCGTTACACCAACGGTGGCCTGACCGTGACTCCGGGTATTGGTGTGCAGTGGAACAGCGAAAACCAGAACGAATACTATTATGGCGTATCGCGCAAAGAGTCCGCTCGCAGCGGTCTGCGTGGCTATAACCCGAACGACAGCTGGAGCCCTTACCTGGAGCTGAGCGCCAGCTACAACTTCCTCGGCGACTGGAGTGTTTACGGTACCGCACGCTACACCCGTCTGTCTGATGAAGTTACTGACAGCCCGATGGTGGATAAATCCTGGACTGGCCTGATTTCTACCGGGATCACCTACAAATTCTGA", - "dna_sequence_length": 747, - "functions": [ - "scaffolding protein for murein synthesizing machinery" - ], - "id": "CDS_1771", - "location": [ - [ - "NC_000913", - 1866472, - "-", - 747 - ] - ], - "md5": "66aaafd6a5bbc36496a62d5e5c0e4ef8", - "parent_gene": "", - "protein_md5": "51b8d2e815ac20348ba0221c0e11f6bb", - "protein_translation": "MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDTDVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHLDDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGIGVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTARYTRLSDEVTDSPMVDKSWTGLISTGITYKF", - "protein_translation_length": 248, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416297.1" - ], - [ - "gene_synonym", - "yeaG" - ], - [ - "gene_synonym", - "ECK1781" - ], - [ - "gene_synonym", - "GI:16129737" - ], - [ - "gene_synonym", - "ASAP:ABE-0005935" - ], - [ - "gene_synonym", - "EcoGene:EG13493" - ], - [ - "gene_synonym", - "JW1772" - ], - [ - "gene_synonym", - "GeneID:946297" - ], - [ - "gene_synonym", - "b1783" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACY3" - ] - ], - "dna_sequence": "ATGAATATATTCGATCACTATCGCCAGCGATATGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCAAGATCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTATCTGCTGGGGCCTGTGGGTGGGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCATCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGAACAACCAGGACATCTCCGCGCTGGTTGGGAAAGTCGATATTCGTAAACTCGAACACTACGCGCAGAATGACCCGGACGCCTACGGCTATTCCGGTGCGCTGTGCCGCGCCAATCAGGGGATCATGGAATTCGTTGAGATGTTTAAAGCACCGATTAAAGTGCTGCATCCCTTGTTAACCGCCACTCAGGAAGGTAACTACAACGGGACGGAAGGTATCTCCGCCCTGCCGTTCAACGGGATTATTCTCGCACACTCGAACGAGTCCGAATGGGTCACTTTCCGTAATAACAAAAACAACGAAGCCTTCCTCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCGTATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTGTCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCAAAGAGATCCAGACGGCCTACCTTGAATCCTATTCCGAATATGGGCAAAACATTTTCGACCGTTATGTTACCTACGCGGATTTCTGGATTCAGGATCAGGAGTATCGCGATCCGGATACCGGGCAGCTGTTTGACCGCGAGTCTCTTAACGCCGAGCTGGAGAAAATCGAGAAACCGGCGGGGATCAGTAATCCAAAAGATTTCCGCAACGAGATTGTTAACTTCGTACTGCGCGCCAGAGCGAATAACAGCGGACGCAATCCGAACTGGACCAGCTATGAAAAACTGCGCACGGTCATCGAGAAGAAAATGTTCTCCAATACCGAGGAGCTGTTGCCGGTTATCTCGTTTAACGCCAAAACGTCAACCGACGAGCAGAAGAAACACGACGACTTTGTCGACCGTATGATGGAAAAAGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAA", - "dna_sequence_length": 1935, - "functions": [ - "protein kinase, endogenous substrate unidentified", - "autokinase" - ], - "id": "CDS_1772", - "location": [ - [ - "NC_000913", - 1866908, - "+", - 1935 - ] - ], - "md5": "bad858554c4f0206921e44793957f822", - "parent_gene": "", - "protein_md5": "7d791ccfa3356359facd9673f209c23a", - "protein_translation": "MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLMAIGEPVMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEKKQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQILEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDENNQDISALVGKVDIRKLEHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLRISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVLEQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARANNSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKGYTRKQVRLLCEWYLRVRKSS", - "protein_translation_length": 644, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76235" - ], - [ - "gene_synonym", - "NP_416298.1" - ], - [ - "gene_synonym", - "ECK1782" - ], - [ - "gene_synonym", - "ASAP:ABE-0005938" - ], - [ - "gene_synonym", - "GI:16129738" - ], - [ - "gene_synonym", - "yeaH" - ], - [ - "gene_synonym", - "JW1773" - ], - [ - "gene_synonym", - "GeneID:946296" - ], - [ - "gene_synonym", - "EcoGene:EG13494" - ], - [ - "gene_synonym", - "b1784" - ] - ], - "dna_sequence": "ATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCGATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCGACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGAGTATCTTGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATCAGCGTTGTGCGTTCATTGCAGAACTCACTGGCGCGACGCACAGCCATGACGGCAGGCAAGCGGCGGGAACTTCATGCACTGGAAGAGAATTTGGCCATCATCAGCAACAGTGAACCTGCGCAACTGCTGGAAGAGGAACGTCTGCGCAAAGAAATTGCAGAATTACGTGCCAAAATTGAACGCGTCCCTTTTATTGACACCTTCGATTTACGTTACAAGAACTACGAGAAGCGGCCCGATCCCTCCAGCCAGGCAGTGATGTTTTGCCTGATGGACGTTTCCGGTTCAATGGATCAATCCACTAAAGATATGGCTAAGCGTTTTTATATTCTGCTGTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGCCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATGACTCTCCGCTTTGCCATGAAATCCTGGCGAAAAAATTATTACCTGTTGTTCGTTATTACAGCTATATCGAAATTACCCGTCGTGCACATCAGACATTGTGGCGAGAATATGAGCATCTGCAATCTACTTTCGACAACTTTGCGATGCAGCACATCCGCGACCAGGATGATATTTATCCGGTGTTCCGTGAACTGTTTCATAAACAAAATGCAACAGCTAAAGGCTAA", - "dna_sequence_length": 1284, - "functions": [ - "UPF0229 family protein" - ], - "id": "CDS_1773", - "location": [ - [ - "NC_000913", - 1868955, - "+", - 1284 - ] - ], - "md5": "78d75825cfc4cdac86a49d7064e08a23", - "parent_gene": "", - "protein_md5": "ba3043f2e2914b147276f033cc5c8740", - "protein_translation": "MTWFIDRRLNGKNKSMVNRQRFLRRYKAQIKQSISEAINKRSVTDVDSGESVSIPTEDISEPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQGQASQDGEGQDEFVFQISKDEYLDLLFEDLALPNLKQNQQRQLTEYKTHRAGYTANGVPANISVVRSLQNSLARRTAMTAGKRRELHALEENLAIISNSEPAQLLEEERLRKEIAELRAKIERVPFIDTFDLRYKNYEKRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILLYLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYNPAQWNIYAAQASDGDNWADDSPLCHEILAKKLLPVVRYYSYIEITRRAHQTLWREYEHLQSTFDNFAMQHIRDQDDIYPVFRELFHKQNATAKG", - "protein_translation_length": 427, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76236" - ], - [ - "gene_synonym", - "NP_416299.1" - ], - [ - "gene_synonym", - "ECK1783" - ], - [ - "gene_synonym", - "GI:16129739" - ], - [ - "gene_synonym", - "ASAP:ABE-0005941" - ], - [ - "gene_synonym", - "yeaI" - ], - [ - "gene_synonym", - "GeneID:946366" - ], - [ - "gene_synonym", - "JW1774" - ], - [ - "gene_synonym", - "b1785" - ], - [ - "gene_synonym", - "EcoGene:EG13495" - ] - ], - "dna_sequence": "ATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTATATATCTCTGCCATCAATAAAATCCAGCACTCACATTGCTCTCCTTTTTATGGTTTCTATGGGTACACAAAAATTAAAAGCTCAAAGCTTTTTTATTTTCAGTTTATTGCTGACGTTAATTTTATTTTGCATTACTACCTTATATAACGAAAACACAAATGTAAAACTCATCCCACAGATGAATTACCTGATGGTTGTTGTGGCTTTGTTTTTCCTTAACGCCGTCATTTTTCTTTTCATGTTAATGAAATATTTCACTAACAAACAAATTTTACCAACACTCATTTTAAGCCTTGCATTTTTAAGTGGCCTTATCTATTTAGTTGAAACCATTGTAATTATCCATAAACCAATTAACGGCAGTACACTGATCCAGACAAAGTCGAATGATGTTTCTATTTTCTATATTTTCCGCCAACTCAGTTTTATTTGTTTAACCTCGCTGGCGCTCTTTTGTTATGGAAAAGACAACATCCTTGACAACAATAAGAAAAAAACGGGAATCCTGTTGCTGGCGCTGATCCCTTTTTTAGTTTTTCCCCTTCTGGCACACAATCTGAGCAGTTATAACGCTGACTATTCTTTGTATGTCGTCGATTACTGTCCGGACAACCATACTGCGACCTGGGGAATCAACTATACAAAAATATTGGTTTGTCTGTGGGCATTTTTACTGTTCTTTATTATCATGCGCACACGATTAGCCAGCGAACTATGGCCGTTAATAGCATTATTATGTCTGGCATCGCTATGCTGCAACTTACTTCTACTGACTCTGGATGAGTATAATTATACTATCTGGTATATCAGTCGCGGGATTGAAGTTTCCAGTAAACTGTTTGTTGTGTCTTTTCTGATTTATAACATTTTTCAGGAGCTGCAACTCTCCAGCAAACTGGCAGTTCATGATGTGCTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATGGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTACCGAACTCAATAGTGCCCAGGCAAAAATCATTGCGGAACGTATGCGTAAAAATGTCGAACTCCTGACCGGCTTTAGTAACAGATATGATGTTCCTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGCAACAAAGTGATTATTCATCATATTTAA", - "dna_sequence_length": 1476, - "functions": [ - "putative membrane-anchored diguanylate cyclase" - ], - "id": "CDS_1774", - "location": [ - [ - "NC_000913", - 1870385, - "+", - 1476 - ] - ], - "md5": "7108c4caa8bff2870757d0e4a2b67e63", - "parent_gene": "", - "protein_md5": "5eda1cb086170e331a3c413e51100b66", - "protein_translation": "MIQSTRISMGLFFKYFLSLTKIDPGQNYISLPSIKSSTHIALLFMVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNAVIFLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVSIFYIFRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYNADYSLYVVDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLASLCCNLLLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLTNIYNRRYFFNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRPDDILARLEGEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTVFSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI", - "protein_translation_length": 491, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1784" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76237" - ], - [ - "gene_synonym", - "JW5291" - ], - [ - "gene_synonym", - "ASAP:ABE-0005943" - ], - [ - "gene_synonym", - "GI:90111331" - ], - [ - "gene_synonym", - "yeaJ" - ], - [ - "gene_synonym", - "EcoGene:EG13496" - ], - [ - "gene_synonym", - "b1786" - ], - [ - "gene_synonym", - "NP_416300.2" - ], - [ - "gene_synonym", - "GeneID:946290" - ] - ], - "dna_sequence": "ATGAAATTGCACCATAGAATGCTCCGGCATTTTATCGCCGCAAGTGTCATTGTGCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCAGAACAGCGGCGCGCCATCTGCGAGGCTTTTGAGTCTGCCAATAACACCCATGGCTTAAACCTGACTGCCCATAAATACCCGGGCTTACGCGGCACACTACAAACCGCATCCACTGACTGCGACACAATTGTGGAAGCTGCAGCACTATTACCCGCTTTTGATCAGGCAGTGGAAGGCAACCGCCACCAGGATGATTACGGTTCAGGTCTTGGGATGGCCGAAGAGAAATTTCACTATTATCTCGATCTCAATGACCGCTATGTCTATTTTTATGAGCCGGTTAATGTTGAATACTTTGCGATGAATAACTGGTCCTTCCTGCAGTCAGGAAGTATTGGCATCGATCGCAAAGATATTGAAAAGGTATTTACCGGGCGTACCGTATTGTCGAGCATTTACCAGGATCAGCGTACTAAACAGAACGTGATGAGTTTGCTGACGCCGGTATATGTCGCAGGGCAGCTAAAAGGGATTGTGCTGCTGGATATTAACAAAAACAATCTGCGGAATATCTTTTATACTCATGACCGCCCTCTCCTCTGGCGTTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGTCTCGTTATCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAACTGGAGCAGCGGTTGCAGAAACTGGTGCAATCCGGTTCTTCGGTGATGTTTATTGCTATTGACATGGACAAGTTAAAGCAAATAAATGACACCCTCGGTCATCAGGAGGGGGATTTAGCGATTACGTTATTAGCTCAGGCGATTAAACAGTCGATTCGTAAAAGTGATTATGCCATCCGACTCGGTGGCGATGAATTCTGCATCATTCTTGTCGATTCGACGCCGCAAATTGCAGCACAACTGCCTGAACGTATCGAAAAACGTCTGCAACATATCGCGCCGCAGAAAGAGATCGGCTTCTCTTCCGGTATTTACGCGATGAAAGAAAACGATACGTTACATGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGA", 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"gene_synonym", - "GeneID:946303" - ], - [ - "gene_synonym", - "yeaK" - ], - [ - "gene_synonym", - "GI:16129741" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64483" - ], - [ - "gene_synonym", - "JW1776" - ], - [ - "gene_synonym", - "b1787" - ], - [ - "gene_synonym", - "EcoGene:EG13497" - ], - [ - "gene_synonym", - "NP_416301.1" - ] - ], - "dna_sequence": "ATGACTGAAATGGCTAAAGGAAGCGTGACGCATCAGCGGTTAATCGCTTTATTATCACAAGAAGGTGCTGACTTCCGCGTCGTTACCCATGAAGCGGTAGGTAAATGTGAAGCGGTGTCAGAAATTCGTGGCACCGCTCTAGGCCAGGGTGCTAAGGCACTGGTATGTAAAGTCAAAGGCAATGGCGTAAATCAACATGTTCTGGCGATCCTCGCAGCCGATCAACAGGCCGATCTGAGCCAACTCGCCAGCCATATAGGCGGATTACGCGCTTCGTTGGCCAGCCCGGCGGAAGTCGATGAACTCACAGGCTGTGTCTTCGGCGCGATCCCCCCTTTCAGCTTCCATCCAAAACTCAAACTGGTTGCCGACCCTCTACTCTTCGAACGATTTGATGAAATCGCCTTCAATGCAGGCATGCTGGATAAATCCGTTATTTTGAAAACCGCGGATTATTTGCGCATTGCGCAACCAGAACTGGTCAATTTCCGCCGCACTGCGTAA", - "dna_sequence_length": 504, - "functions": [ - "aminoacyl-tRNA editing domain protein" - ], - "id": "CDS_1776", - "location": [ - [ - "NC_000913", - 1873574, - "+", - 504 - ] - ], - "md5": "76352abbdc7e7e796f40c9675b1bc02d", - "parent_gene": "", - "protein_md5": "2da1b3dbc2fdda86bf9b48e45087b1d6", - "protein_translation": "MTEMAKGSVTHQRLIALLSQEGADFRVVTHEAVGKCEAVSEIRGTALGQGAKALVCKVKGNGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDELTGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTADYLRIAQPELVNFRRTA", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005947" - ], - [ - "gene_synonym", - "GI:90111332" - ], - [ - "gene_synonym", - "EcoGene:EG14417" - ], - [ - "gene_synonym", - "NP_416302.2" - ], - [ - "gene_synonym", - "yoaI" - ], - [ - "gene_synonym", - "ECK4472" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76239" - ], - [ - "gene_synonym", - "b1788" - ], - [ - "gene_synonym", - "GeneID:946294" - ] - ], - "dna_sequence": "ATGAACGATCAAATGTTTGTCGAGACACTGATTATCACGTCATCGTTTTTTGCCATTGCTGTTGTACTGGTTTTGTCCGTTCTTCTTATCGAACGGACCGGCTAG", - "dna_sequence_length": 105, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1777", - "location": [ - [ - "NC_000913", - 1874182, - "-", - 105 - ] - ], - "md5": "1011216d2370f04c40e12b64b54c1b91", - "parent_gene": "", - "protein_md5": "a184f9f606b45cd38e272eb64439272d", - "protein_translation": "MNDQMFVETLIITSSFFAIAVVLVLSVLLIERTG", - "protein_translation_length": 34, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1787" - ], - [ - "gene_synonym", - "EcoGene:EG13498" - ], - [ - "gene_synonym", - "yeaL" - ], - [ - "gene_synonym", - "ASAP:ABE-0005954" - ], - [ - "gene_synonym", - "NP_416303.1" - ], - [ - "gene_synonym", - "GI:16129743" - ], - [ - "gene_synonym", - "GeneID:946307" - ], - [ - "gene_synonym", - "b1789" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACY6" - ], - [ - "gene_synonym", - "JW1778" - ] - ], - "dna_sequence": "ATGTTTGATGTCACTTTGCTGATCCTGCTCGGGTTAGCTGCGCTGGGCTTTATCAGTCATAACACCACTGTCGCCGTTTCAATTCTGGTGTTAATCATTGTCCGCGTCACACCGTTAAGCACCTTTTTTCCGTGGATTGAAAAACAGGGGCTAAGTATCGGGATAATCATTCTGACGATTGGCGTTATGGCCCCCATCGCCAGCGGGACGCTACCGCCCTCAACCTTGATTCACTCGTTTCTGAACTGGAAATCACTGGTGGCGATTGCAGTAGGCGTGATTGTCTCCTGGCTGGGTGGGCGCGGCGTGACGTTAATGGGCAGCCAGCCGCAACTGGTCGCCGGGCTGCTGGTAGGCACTGTTTTAGGCGTAGCGCTGTTTCGCGGCGTACCGGTTGGGCCGCTTATTGCCGCGGGTCTGGTTTCGCTGATTGTGGGGAAACAGTAG", - "dna_sequence_length": 447, - "functions": [ - "UPF0756 family putative inner membrane protein" - ], - "id": "CDS_1778", - "location": [ - [ - "NC_000913", - 1874352, - "+", - 447 - ] - ], - "md5": "899cdef03d780eb6d78d9845c6176f63", - "parent_gene": "", - "protein_md5": "359cc2ab9a43705c447cacc1a5617997", - "protein_translation": "MFDVTLLILLGLAALGFISHNTTVAVSILVLIIVRVTPLSTFFPWIEKQGLSIGIIILTIGVMAPIASGTLPPSTLIHSFLNWKSLVAIAVGVIVSWLGGRGVTLMGSQPQLVAGLLVGTVLGVALFRGVPVGPLIAAGLVSLIVGKQ", - "protein_translation_length": 148, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946590" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76241" - ], - [ - "gene_synonym", - "yeaM" - ], - [ - "gene_synonym", - "ECK1788" - ], - [ - "gene_synonym", - "ASAP:ABE-0005956" - ], - [ - "gene_synonym", - "GI:16129744" - ], - [ - "gene_synonym", - "EcoGene:EG13499" - ], - [ - "gene_synonym", - "b1790" - ], - [ - "gene_synonym", - "JW1779" - ], - [ - "gene_synonym", - "NP_416304.1" - ] - ], - "dna_sequence": "ATGATGCACAGGTTGAATCTCAATGGCTATGAACCCGACCGACACCATGAAGCCGCGGTCGCATTTTGTATTCACGCCGGAACGGATGAGTTAACCAGTCCTGTACATCAGCACCGCAAAGGACAGCTGATACTGGCGCTACATGGTGCAATTACCTGTACGGTGGAAAATGCTTTGTGGATGGTGCCGCCACAATATGCGGTTTGGATACCGGGCGGGGTGGAACATAGCAATCAAGTAACAGCTAATGCTGAACTCTGTTTTCTGTTTATCGAACCCAGCGCAGTGACAATGCCGACAACATGTTGCACATTGAAAATATCGCCCTTATGCCGGGAATTAATTTTAACCCTGGCAAACAGGACGACGACTCAGCGTGCTGAGCCAATGACCCGCAGATTAATTCAGGTCCTGTTTGATGAACTCCCTCAGCAGCCACAACAACAGCTGCACCTGCCCGTTTCTTCTCATCCTAAAATCCGCACGATGGTGGAGATGATGGCGAAAGGGCCTGTCGAGTGGGGGGCATTGGGGCAATGGGCTGGCTTTTTTGCGATGAGTGAACGCAATCTTGCCCGACTGATAGTAAAAGAGACGGGGTTGAGTTTTCGCCAGTGGCGTCAGCAGTTACAGCTGATTATGGCGCTTCAGGGATTAGTGAAAGGCGATACTGTACAGAAAGTTGCTCATACGCTGGGGTATGATTCAACAACGGCCTTTATTACTATGTTTAAGAAAGGCCTGGGGCAAACGCCAGGCCGATATATTGCGAGATTAACTACTGTTTCCCCACAATCAGCGAAACCAGACCCGCGGCAATAA", - "dna_sequence_length": 822, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_1779", - "location": [ - [ - "NC_000913", - 1875576, - "-", - 822 - ] - ], - "md5": "2d70d60ca9ba619409074a9f578fd267", - "parent_gene": "", - "protein_md5": "e173fee78fd5016f2790d2d6e479eb65", - "protein_translation": "MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIARLTTVSPQSAKPDPRQ", - "protein_translation_length": 273, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76242" - ], - [ - "gene_synonym", - "EcoGene:EG13500" - ], - [ - "gene_synonym", - "ASAP:ABE-0005962" - ], - [ - "gene_synonym", - "yeaN" - ], - [ - "gene_synonym", - "ECK1789" - ], - [ - "gene_synonym", - "NP_416305.1" - ], - [ - "gene_synonym", - "GI:16129745" - ], - [ - "gene_synonym", - "b1791" - ], - [ - "gene_synonym", - "GeneID:946309" - ], - [ - "gene_synonym", - "JW1780" - ] - ], - "dna_sequence": "ATGACCTGTTCAACTTCATTAAGCGGCAAAAACAGGATTGTCCTTATCGCTGGCATTCTGATGATTGCCACAACATTACGCGTCACCTTTACCGGCGCAGCACCGTTACTGGATACGATTCGTTCCGCTTACTCGCTGACGACAGCGCAAACCGGCTTATTGACCACCCTGCCATTATTGGCCTTTGCGCTAATCTCACCTTTGGCTGCCCCGGTAGCGCGACGTTTTGGTATGGAACGTAGCCTGTTTGCCGCGTTACTTTTGATCTGTGCTGGTATCGCAATTCGCTCTCTCCCTTCGCCTTACTTATTATTTGGCGGTACAGCGGTCATTGGCGGTGGGATTGCATTAGGCAATGTCTTACTGCCAGGATTAATTAAACGCGATTTCCCTCATTCCGTCGCCAGACTTACCGGCGCATATTCCCTGACAATGGGAGCTGCAGCGGCACTGGGATCGGCTATGGTCGTGCCGCTGGCTTTGAACGGTTTTGGCTGGCAAGGCGCGTTGCTCATGCTGATGTGTTTTCCTCTGCTGGCTCTTTTTTTATGGCTGCCACAGTGGCGAAGTCAACAACATGCAAATTTGAGTACCTCGCGCGCCTTACATACTCGGGGTATCTGGCGTTCACCGCTTGCCTGGCAGGTCACATTGTTTCTTGGGATCAACTCACTGGTCTATTACGTGATTATTGGCTGGCTTCCGGCGATCCTCATCAGTCACGGCTATAGCGAAGCACAGGCGGGTTCACTGCATGGTTTGCTGCAACTAGCCACAGCAGCACCCGGTTTGCTGATCCCACTTTTCTTACATCATGTGAAAGATCAGCGTGGTATTGCAGCGTTCGTTGCCTTGATGTGCGCAGTGGGCGCGGTTGGGCTCTGCTTTATGCCAGCGCACGCGATCACCTGGACTCTGCTTTTCGGTTTTGGTTCCGGCGCAACAATGATACTGGGGTTGACGTTCATTGGTCTGCGGGCTAGTTCTGCGCATCAGGCGGCGGCACTCTCGGGGATGGCACAATCCGTCGGGTATTTGTTGGCAGCCTGTGGGCCGCCGCTGATGGGTAAAATACACGATGCTAACGGTAACTGGTCTGTACCACTTATGGGTGTTGCCATACTTTCACTACTGATGGCGATTTTCGGACTTTGCGCCGGGAGAGACAAAGAAATTCGCTAA", 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], - [ - "gene_synonym", - "GI:90111333" - ], - [ - "gene_synonym", - "NP_416306.2" - ], - [ - "gene_synonym", - "EcoGene:EG13501" - ], - [ - "gene_synonym", - "b1792" - ], - [ - "gene_synonym", - "yeaO" - ], - [ - "gene_synonym", - "JW1781" - ] - ], - "dna_sequence": "ATGAATATTCAGTGCAAACGCGTTTATGATCCGGCTGAACAGAGCGATGGTTATCGCATACTGGTCGACCGCCTCTGGCCGCGCGGTATCAAAAAAACCGATTTAGCCCTTGATGAGTGGGATAAAGAAATCACGCCGTCAACGGAACTGCGCAAAGCCTTTCACGGCGAAGTCGTCGATTATGCAACCTTTCGCGAGCAATATCTTGCAGAACTGGCGCAACACGAGCAAGAAGGAAAGCGGCTGGCGGACATCGCCAAAAAACAGCCGCTGACCCTGCTCTACTCAGCAAAAAACACCACGCAGAACCATGCGCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGA", - "dna_sequence_length": 348, - "functions": [ - "DUF488 family protein" - ], - "id": "CDS_1781", - "location": [ - [ - "NC_000913", - 1876909, - "+", - 348 - ] - ], - "md5": "9ed2c65e258cce574e5e3e361cc30262", - "parent_gene": "", - "protein_md5": "2c3b8950ae2804cb881e39a1162f1c3d", - "protein_translation": "MNIQCKRVYDPAEQSDGYRILVDRLWPRGIKKTDLALDEWDKEITPSTELRKAFHGEVVDYATFREQYLAELAQHEQEGKRLADIAKKQPLTLLYSAKNTTQNHALVLADWLRSL", - "protein_translation_length": 115, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416307.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64493" - ], - [ - "gene_synonym", - "yoaF" - ], - [ - "gene_synonym", - "ECK1791" - ], - [ - "gene_synonym", - "EcoGene:EG14304" - ], - [ - "gene_synonym", - "ASAP:ABE-0005966" - ], - [ - "gene_synonym", - "GI:16129747" - ], - [ - "gene_synonym", - "GeneID:946310" - ], - [ - "gene_synonym", - "b1793" - ], - [ - "gene_synonym", - "JW1782" - ] - ], - "dna_sequence": "ATGAAAATTATCAGTTTTGTTCTGCCTTGCTTGCTGGTCCTGGCTGGTTGTTCAACCCCTTCTCAGCCAGAAGCACCTAAACCGCCGCAGATTGGTATGGCAAATCCGGCGTCGGTCTATTGCCAGCAGAAGGGCGGGACGCTCATTCCAGTGCAGACAGCGCAAGGGGTCAGCAACAATTGCAAATTACCGGGCGGTGAAACGATTGATGAATGGGCATTGTGGCGGCGTGACCATCCGGCTGGTGAAAAATAA", - "dna_sequence_length": 255, - "functions": [ - "DUF333 family outer membrane lipoprotein" - ], - "id": "CDS_1782", - "location": [ - [ - "NC_000913", - 1877532, - "-", - 255 - ] - ], - "md5": "a1aa5a2a59314d1655c25dc41c970d1c", - "parent_gene": "", - "protein_md5": "9ecc1d8c1c619afd50682cff8e257c4f", - "protein_translation": "MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQKGGTLIPVQTAQGVSNNCKLPGGETIDEWALWRRDHPAGEK", - "protein_translation_length": 84, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0005972" - ], - [ - "gene_synonym", - "NP_416308.4" - ], - [ - "gene_synonym", - "ECK1792" - ], - [ - "gene_synonym", - "JW5292" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76245" - ], - [ - "gene_synonym", - "GI:90111334" - ], - [ - "gene_synonym", - "EcoGene:EG13502" - ], - [ - "gene_synonym", - "yeaP" - ], - [ - "gene_synonym", - "GeneID:948969" - ], - [ - "gene_synonym", - "b1794" - ] - ], - "dna_sequence": "GTGTCAGATCAGATTATCGCCCGCGTCTCGCAATCCCTTGCCAAAGAACAGTCACTGGAAAGTCTGGTCCGACAGCTTCTGGAGATGCTGGAAATGGTCACTGATATGGAATCAACCTACCTGACCAAAGTGGATGTCGAAGCGCGCCTGCAGCATATTATGTTTGCCCGTAACAGCCAGAAAATGTACATCCCGGAGAATTTTACCGTCTCGTGGGATTACTCGTTATGCAAACGCGCCATTGATGAAAACTGCTTTTTCAGCGATGAAGTCCCCGACCGTTGGGGTGACTGTATTGCGGCACGCAATCTTGGCATCACCACATTTCTGAGCACGCCAATTCACTTACCGGATGGATCATTCTATGGCACGCTTTGCGCCGCCAGCAGTGAGAAGCGCCAGTGGAGTGAACGCGCGGAACAGGTTTTACAGTTATTCGCCGGACTGATTGCACAATATATTCAAAAAGAGGCACTGGTTGAACAGCTGCGCGAAGCCAATGCTGCGCTGATTGCGCAATCGTATACCGACTCGTTAACCGGGCTACCGAATCGGCGGGCGATTTTTGAAAATCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAATCAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATTTCGTCGCTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGA", 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- "gene_synonym", - "YP_002791242.1" - ], - [ - "gene_synonym", - "GI:226524722" - ] - ], - "dna_sequence": "ATGCGAATCGGTATTATTTTTCCGGTTGTAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAA", - "dna_sequence_length": 99, - "functions": [ - "inner membrane-associated protein" - ], - "id": "CDS_1784", - "location": [ - [ - "NC_000913", - 1878773, - "+", - 99 - ] - ], - "md5": "9295e6f08e825a3bd8e892071fb70630", - "parent_gene": "", - "protein_md5": "96de30957245213b2465773daab35607", - "protein_translation": "MRIGIIFPVVIFITAVVFLAWFFIGGYAAPGA", - "protein_translation_length": 32, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14480" - ], - [ - "gene_synonym", - "yoaJ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P603" - ], - [ - "gene_synonym", - "GeneID:7751648" - ], - [ - "gene_synonym", - "b4675" - ], - [ - "gene_synonym", - "YP_002791243.1" - ], - [ - "gene_synonym", - "ECK4490" - ], - [ - "gene_synonym", - "GI:226524723" - ] - ], 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"ATGGGCATTCTGTCATGGATTATTTTTGGGCTTATTGCCGGTATTCTGGCGAAGTGGATCATGCCAGGTAAAGATGGAGGTGGATTCTTTATGACTATCCTGCTGGGGATAGTCGGTGCCGTAGTCGGCGGATGGATCAGCACGCTGTTTGGCTTTGGTAAAGTCGATGGCTTCAATTTTGGCAGCTTCGTGGTTGCCGTTATTGGTGCGATTGTCGTGCTATTTATCTACAGGAAGATTAAAAGTTAA", - "dna_sequence_length": 249, - "functions": [ - "UPF0410 family protein" - ], - "id": "CDS_1786", - "location": [ - [ - "NC_000913", - 1879255, - "-", - 249 - ] - ], - "md5": "785045a8fef97e39b968597ce61f70e7", - "parent_gene": "", - "protein_md5": "455f98bebfeb521aa6aa9acd749a3b4e", - "protein_translation": "MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGGWISTLFGFGKVDGFNFGSFVVAVIGAIVVLFIYRKIKS", - "protein_translation_length": 82, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416310.1" - ], - [ - "gene_synonym", - "ECK1794" - ], - [ - "gene_synonym", - "yoaG" - ], - [ - "gene_synonym", - "ASAP:ABE-0005976" - ], - [ - "gene_synonym", - "GeneID:946314" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64496" - ], - [ - "gene_synonym", - "GI:16129750" - ], - [ - "gene_synonym", - "JW1785" - ], - [ - "gene_synonym", - "EcoGene:EG14305" - ], - [ - "gene_synonym", - "b1796" - ] - ], - "dna_sequence": "ATGGGCAAAGCAACGTATACCGTGACCGTCACCAATAACAGCAATGGCGTTTCTGTCGATTATGAAACAGAGACGCCGATGACTTTGCTGGTGCCAGAAGTGGCGGCTGAAGTGATAAAAGATCTGGTGAATACCGTACGTTCTTATGACACGGAAAACGAACATGATGTTTGTGGTTGGTAA", - "dna_sequence_length": 183, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1787", - "location": [ - [ - "NC_000913", - 1879585, - "-", - 183 - ] - ], - "md5": "f71bb27c048561f6c495ecae30e0d568", - "parent_gene": "", - "protein_md5": "6b2a44725c222898af8834d81fe2c51f", - "protein_translation": "MGKATYTVTVTNNSNGVSVDYETETPMTLLVPEVAAEVIKDLVNTVRSYDTENEHDVCGW", - "protein_translation_length": 60, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1795" - ], - [ - "gene_synonym", - "ASAP:ABE-0005979" - ], - [ - "gene_synonym", - "yeaR" - ], - [ - "gene_synonym", - "GeneID:946317" - ], - [ - "gene_synonym", - "NP_416311.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64488" - ], - [ - "gene_synonym", - "EcoGene:EG13504" - ], - [ - "gene_synonym", - "GI:16129751" - ], - [ - "gene_synonym", - "JW1786" - ], - [ - "gene_synonym", - "b1797" - ] - ], - "dna_sequence": "ATGCTTCAAATCCCACAGAATTATATTCATACGCGCTCAACGCCTTTCTGGAATAAACAAACTGCACCTGCCGGAATATTCGAACGTCATCTTGATAAAGGAACGCGCCCGGGGGTTTACCCACGCCTTTCCGTTATGCATGGGGCGGTCAAATATCTCGGCTACGCTGATGAACACAGTGCAGAGCCTGATCAGGTGATCCTTATCGAAGCGGGGCAGTTTGCGGTGTTCCCTCCAGAAAAGTGGCACAACATTGAAGCCATGACTGACGATACTTATTTCAACATTGACTTCTTCGTGGCTCCTGAAGTCCTGATGGAAGGTGCGCAACAACGGAAAGTCATTCATAACGGGAAATGA", - "dna_sequence_length": 360, - "functions": [ - "DUF1971 family protein, nitrate-inducible" - ], - "id": "CDS_1788", - "location": [ - [ - "NC_000913", - 1879948, - "-", - 360 - ] - ], - "md5": "03ddc06a2c9886aa494a025eab764880", - "parent_gene": "", - "protein_md5": "baa4308cec92c44ae312c56d9e35f7bc", - "protein_translation": "MLQIPQNYIHTRSTPFWNKQTAPAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAPEVLMEGAQQRKVIHNGK", - "protein_translation_length": 119, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1796" - ], - [ - "gene_synonym", - "leuE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76249" - ], - [ - "gene_synonym", - "NP_416312.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0005984" - ], - [ - "gene_synonym", - "GeneID:946157" - ], - [ - "gene_synonym", - "b1798" - ], - [ - "gene_synonym", - "GI:16129752" - ], - [ - "gene_synonym", - "EcoGene:EG13505" - ], - [ - "gene_synonym", - "yeaS" - ], - [ - "gene_synonym", - "JW1787" - ] - ], - "dna_sequence": "GTGTTCGCTGAATACGGGGTTCTGAATTACTGGACCTATCTGGTTGGGGCCATTTTTATTGTGTTGGTGCCAGGGCCAAATACCCTGTTTGTACTCAAAAATAGCGTCAGTAGCGGTATGAAAGGCGGTTATCTTGCGGCCTGCGGTGTATTTATTGGCGATGCGGTATTGATGTTTCTGGCATGGGCTGGAGTGGCGACATTAATTAAGACCACCCCGATATTATTCAACATTGTACGTTATCTTGGTGCGTTTTATTTGCTCTATCTGGGGAGTAAAATTCTTTACGCGACCCTGAAGGGTAAAAATAGCGAGGCCAAATCCGATGAGCCCCAATACGGTGCTATTTTTAAACGCGCGTTAATTTTGAGCCTGACTAATCCGAAAGCCATTTTGTTCTATGTGTCGTTTTTCGTACAGTTTATCGATGTTAATGCCCCACATACGGGAATTTCATTCTTTATTCTGGCGGCGACGCTGGAACTGGTGAGTTTCTGCTATTTGAGCTTCCTGATTATATCTGGTGCTTTTGTCACGCAGTACATACGTACCAAAAAGAAACTGGCTAAAGTTGGCAACTCACTGATTGGTTTGATGTTCGTGGGTTTCGCTGCCCGACTGGCGACGCTGCAATCCTGA", - "dna_sequence_length": 639, - "functions": [ - "leucine efflux protein" - ], - "id": "CDS_1789", - "location": [ - [ - "NC_000913", - 1880759, - "-", - 639 - ] - ], - "md5": "2496790d48da44d0fe6553ba271af72e", - "parent_gene": "", - "protein_md5": "ada8bc7ac692e7f98368a4bad0e90ef1", - "protein_translation": "MFAEYGVLNYWTYLVGAIFIVLVPGPNTLFVLKNSVSSGMKGGYLAACGVFIGDAVLMFLAWAGVATLIKTTPILFNIVRYLGAFYLLYLGSKILYATLKGKNSEAKSDEPQYGAIFKRALILSLTNPKAILFYVSFFVQFIDVNAPHTGISFFILAATLELVSFCYLSFLIISGAFVTQYIRTKKKLAKVGNSLIGLMFVGFAARLATLQS", - "protein_translation_length": 212, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1797" - ], - [ - "gene_synonym", - "yeaT" - ], - [ - "gene_synonym", - "GeneID:946316" - ], - [ - "gene_synonym", - "GI:90111335" - ], - [ - "gene_synonym", - "ASAP:ABE-0005987" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76250" - ], - [ - "gene_synonym", - "b1799" - ], - [ - "gene_synonym", - "EcoGene:EG13506" - ], - [ - "gene_synonym", - "JW1788" - ], - [ - "gene_synonym", - "NP_416313.4" - ], - [ - "gene_synonym", - "dmlR" - ] - ], - "dna_sequence": "ATGAATAATTTACCGCTGCTGAATGATTTGCGCGTCTTTATGCTGGTGGCTCGCCGGGCTGGTTTTGCCGCCGTGGCGGAAGAACTGGGCGTTTCACCGGCGTTCGTCAGCAAGCGCATCGCCTTGCTGGAGCAAACGCTAAACGTGGTGTTGTTACACCGCACCACCCGCCGCGTCACCATTACCGAAGAAGGAGAGCGGATTTATGAATGGGCGCAGCGGATTTTGCAGGATGTCGGTCAGATGATGGACGAACTTTCTGACGTGCGTCAGGTGCCGCAGGGGATGCTGCGTATTATCAGCAGCTTTGGTTTTGGACGACAGGTGGTGGCTCCGGCGTTATTAGCGCTGGCGAAGGCGTATCCGCAACTGGAATTACGTTTTGATGTGGAAGACCGACTGGTCGATTTGGTCAATGAAGGTGTCGATCTCGATATTCGCATTGGCGATGACATCGCCCCTAATTTAATCGCCCGCAAACTGGCGACCAATTACCGTATTCTCTGCGCGTCGCCGGAATTTATTGCGCAACATGGCGCGCCGAAACATTTAACCGATCTTTCTGCATTGCCGTGCCTGGTCATTAAAGAGCGCGATCATCCTTTTGGTGTCTGGCAATTACGCAATAAAGAAGGCCCCCATGCGATTAAAGTCACCGGCCCACTGTCGTCTAATCATGGAGAAATTGTCCATCAGTGGTGTCTCGATGGGCAGGGGATTGCTCTGCGTTCCTGGTGGGATGTTAGCGAAAACATTGCCAGTGGTCATTTAGTGCAAGTGCTACCGGAATATTACCAGCCAGCGAACGTCTGGGCCGTTTATGTTTCAAGGCTGGCGACGTCAGCGAAAGTGCGGATAACGGTAGAATTTTTACGCCAGTATTTTGCCGAGCACTACCCGAATTTTTCACTGGAGCATGCCTGA", - "dna_sequence_length": 924, - "functions": [ - "transcriptional activator of dmlA" - ], - "id": "CDS_1790", - "location": [ - [ - "NC_000913", - 1881809, - "-", - 924 - ] - ], - "md5": "b4e71098c7d8f8461fac5c3eebc26cb1", - "parent_gene": "", - "protein_md5": "672e56be62df4db0b4e7aeebbac33972", - "protein_translation": "MNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLEQTLNVVLLHRTTRRVTITEEGERIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISSFGFGRQVVAPALLALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNYRILCASPEFIAQHGAPKHLTDLSALPCLVIKERDHPFGVWQLRNKEGPHAIKVTGPLSSNHGEIVHQWCLDGQGIALRSWWDVSENIASGHLVQVLPEYYQPANVWAVYVSRLATSAKVRITVEFLRQYFAEHYPNFSLEHA", - "protein_translation_length": 307, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1800" - ], - [ - "gene_synonym", - "GeneID:946319" - ], - [ - "gene_synonym", - "dmlA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76251" - ], - [ - "gene_synonym", - "ASAP:ABE-0005991" - ], - [ - "gene_synonym", - "NP_416314.1" - ], - [ - "gene_synonym", - "ECK1798" - ], - [ - "gene_synonym", - "yeaU" - ], - [ - "gene_synonym", - "GI:16129754" - ], - [ - "gene_synonym", - "JW1789" - ], - [ - "gene_synonym", - "EcoGene:EG13507" - ] - ], - "dna_sequence": "ATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACAGCCATCACGGTAAAATGATGCCGGACGACTGGCATGAGCAACTTAGCCGTTTCGACGCCATCTATTTTGGTGCCGTCGGCTGGCCGGATACCGTTCCGGACCATATTTCGTTGTGGGGTTCGCTGCTGAAATTTCGTCGTGAATTCGACCAGTACGTCAACCTGCGCCCGGTTCGTCTCTTTCCTGGCGTTCCCTGCCCGCTGGCGGGAAAACAGCCTGGCGACATCGATTTTTACGTGGTCAGGGAAAACACCGAAGGCGAATATTCCTCGCTCGGCGGTAGAGTGAATGAAGGTACAGAGCATGAAGTCGTCATTCAGGAATCGGTATTTACCCGCCGTGGTGTCGATCGCATTTTGCGTTATGCCTTCGAACTTGCGCAAAGCCGTCCACGTAAGACACTAACTTCTGCCACTAAATCGAACGGTTTAGCCATCAGCATGCCGTACTGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGATGCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTGCTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTTTCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTGCAAAATTATTTTGCGTTAA", - "dna_sequence_length": 1086, - "functions": [ - "D-malate oxidase, NAD-dependent", - "putative tartrate dehydrogenase" - ], - "id": "CDS_1791", - "location": [ - [ - "NC_000913", - 1881912, - "+", - 1086 - ] - ], - "md5": "940f95e23eac0d64996216a0549995a0", - "parent_gene": "", - "protein_md5": "e48d1c1f351c266723f9809664d91861", - "protein_translation": "MMKTMRIAAIPGDGIGKEVLPEGIRVLQAAAERWGFALSFEQMEWASCEYYSHHGKMMPDDWHEQLSRFDAIYFGAVGWPDTVPDHISLWGSLLKFRREFDQYVNLRPVRLFPGVPCPLAGKQPGDIDFYVVRENTEGEYSSLGGRVNEGTEHEVVIQESVFTRRGVDRILRYAFELAQSRPRKTLTSATKSNGLAISMPYWDERVEAMAENYPEIRWDKQHIDILCARFVMQPERFDVVVASNLFGDILSDLGPACTGTIGIAPSANLNPERTFPSLFEPVHGSAPDIYGKNIANPIATIWAGAMMLDFLGNGDERFQQAHNGILAAIEEVIAHGPKTPDMKGNATTPQVADAICKIILR", - "protein_translation_length": 361, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1801" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABD1" - ], - [ - "gene_synonym", - "JW5293" - ], - [ - "gene_synonym", - "ASAP:ABE-0005995" - ], - [ - "gene_synonym", - "NP_416315.1" - ], - [ - "gene_synonym", - "GI:16129755" - ], - [ - "gene_synonym", - "ECK1799" - ], - [ - "gene_synonym", - "yeaV" - ], - [ - "gene_synonym", - "GeneID:947326" - ], - [ - "gene_synonym", - "EcoGene:EG13508" - ] - ], - "dna_sequence": "TTGGTTTTGCTGGCAATGGGACTGGTGATTTATTTAGCCACCAGTAAATACGGCAATATTCGTCTTGGCGAAGGAAAACCGGAATACAGCACGCTCTCCTGGCTGTTTATGTTTATTTGTGCCGGTTTAGGTTCTTCTACGCTTTATTGGGGGGTTGCTGAATGGGCCTATTATTATCAAACACCTGGATTAAATATCGCACCGCGTTCACAACAGGCACTCGAATTTAGCGTTCCCTACTCTTTCTTCCACTGGGGCATCAGCGCCTGGGCAACTTATACGCTGGCCTCATTAATCATGGCTTATCACTTTCATGTGCGGAAAAACAAAGGTCTGAGCCTTTCCGGCATTATTGCTGCTATTACCGGCGTTCGCCCGCAAGGCCCATGGGGAAAACTGGTCGATTTGATGTTCCTGATCGCCACTGTCGGCGCACTGACCATTTCCCTTGTTGTTACCGCAGCAACCTTTACCCGTGGGCTTTCCGCGCTGACCGGTTTACCCGATAACTTCACCGTGCAGGCATTTGTGATCCTGCTTTCCGGCGGCATTTTTTGCCTAAGCTCGTGGATTGGTATCAACAACGGTTTGCAACGTCTGAGCAAAATGGTTGGCTGGGGCGCGTTCCTGCTGCCATTACTGGTGCTGATTGTCGGCCCAACCGAATTTATTACCAACAGCATCATCAATGCCATCGGCCTGACCACGCAAAACTTCCTGCAAATGAGCTTATTCACCGATCCGCTTGGCGATGGTTCATTTACCCGCAACTGGACCGTTTTCTACTGGCTGTGGTGGATCTCATACACCCCTGGCGTAGCAATGTTTGTCACCCGCGTTTCCCGCGGTCGTAAGATTAAAGAAGTTATCTGGGGACTGATCCTCGGCAGCACCGTCGGTTGCTGGTTCTTCTTTGGCGTAATGGAAAGCTATGCCATTCATCAGTTTATCAATGGCGTAATCAACGTCCCACAGGTGCTGGAAACACTGGGCGGCGAAACAGCTGTACAGCAAGTTCTGATGTCGTTGCCAGCCGGTAAATTGTTCCTCGCCGCATACCTGGGCGTGATGATTATTTTCCTTGCCTCGCATATGGATGCAGTGGCCTACACCATGGCGGCGACCAGTACGCGTAATCTCCAGGAAGGTGACGATCCTGACCGTGGGCTGCGTCTTTTCTGGTGCGTGGTGATCACTCTGATCCCGCTTTCCATCTTGTTTACCGGTGCTTCGCTGGAAACGATGAAAACCACCGTCGTGCTCACAGCCCTTCCCTTCCTCGTCATTTTACTGGTGAAAGTCGGCGGGTTTATTCGCTGGCTGAAACAGGATTACGCCGACATTCCGGCTCATCAAGTTGAACATTATCTCCCGCAGACACCGGTTGAAGCCCTGGAAAAAACGCCAGTGCTCCCTGCGGGAACCGTATTCAAAGGCGACAACTGA", - "dna_sequence_length": 1446, - "functions": [ - "putative transporter" - ], - "id": "CDS_1792", - "location": [ - [ - "NC_000913", - 1883188, - "+", - 1446 - ] - ], - "md5": "974f8bf8037f12dd23cf96a32eaa8e11", - "parent_gene": "", - "protein_md5": "cb9c619007fb2b7a96e1647ab9ab3453", - "protein_translation": "MVLLAMGLVIYLATSKYGNIRLGEGKPEYSTLSWLFMFICAGLGSSTLYWGVAEWAYYYQTPGLNIAPRSQQALEFSVPYSFFHWGISAWATYTLASLIMAYHFHVRKNKGLSLSGIIAAITGVRPQGPWGKLVDLMFLIATVGALTISLVVTAATFTRGLSALTGLPDNFTVQAFVILLSGGIFCLSSWIGINNGLQRLSKMVGWGAFLLPLLVLIVGPTEFITNSIINAIGLTTQNFLQMSLFTDPLGDGSFTRNWTVFYWLWWISYTPGVAMFVTRVSRGRKIKEVIWGLILGSTVGCWFFFGVMESYAIHQFINGVINVPQVLETLGGETAVQQVLMSLPAGKLFLAAYLGVMIIFLASHMDAVAYTMAATSTRNLQEGDDPDRGLRLFWCVVITLIPLSILFTGASLETMKTTVVLTALPFLVILLVKVGGFIRWLKQDYADIPAHQVEHYLPQTPVEALEKTPVLPAGTVFKGDN", - "protein_translation_length": 481, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5294" - ], - [ - "gene_synonym", - "b1802" - ], - [ - "gene_synonym", - "ASAP:ABE-0005997" - ], - [ - "gene_synonym", - "ECK1800" - ], - [ - "gene_synonym", - "GeneID:946325" - ], - [ - "gene_synonym", - "GI:16129756" - ], - [ - "gene_synonym", - "yeaW" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABR7" - ], - [ - "gene_synonym", - "EcoGene:EG13509" - ], - [ - "gene_synonym", - "NP_416316.1" - ] - ], - "dna_sequence": "ATGAGCAATCTGAGCCCTGACTTTGTACTACCCGAAAATTTTTGCGCTAACCCGCAAGAGGCGTGGACCATTCCTGCCCGTTTTTATACCGATCAGAACGCGTTTGAACACGAAAAAGAGAACGTCTTCGCCAAAAGCTGGATTTGCGTCGCTCACAGCAGCGAACTGGCGAATGCCAATGATTATGTGACGCGTGAGATCATTGGCGAAAGCATCGTGCTGGTACGCGGTCGTGATAAGGTTTTGCGCGCGTTCTATAACGTGTGTCCGCACCGTGGTCATCAGTTGTTGAGCGGTGAAGGAAAAGCAAAAAATGTGATTACCTGCCCGTATCACGCATGGGCATTCAAACTCGATGGCAACCTGGCCCATGCACGTAACTGCGAAAACGTCGCCAATTTCGATAGCGACAAAGCGCAACTGGTTCCGGTGCGTCTGGAAGAATATGCCGGATTCGTCTTCATCAACATGGACCCCAACGCCACCAGCGTAGAAGATCAATTACCCGGCCTGGGCGCGAAAGTGCTGGAAGCCTGCCCGGAAGTCCACGATCTGAAACTGGCGGCCCGCTTTACCACCCGCACGCCTGCCAACTGGAAGAACATTGTCGATAACTATCTCGAGTGCTATCACTGTGGTCCGGCGCATCCAGGTTTCTCCGACTCCGTACAGGTTGATCGTTACTGGCACACCATGCACGGTAACTGGACGCTGCAATACGGTTTCGCCAAACCGTCCGAACAGTCGTTTAAATTTGAAGAGGGTACGGATGCGGCATTCCACGGTTTCTGGCTGTGGCCGTGCACGATGCTGAACGTCACCCCGATCAAAGGGATGATGACGGTCATTTATGAATTCCCGGTGGATTCTGAAACTACCCTGCAAAACTACGATATTTACTTCACCAATGAAGAGTTAACCGACGAGCAAAAATCGCTGATTGAGTGGTATCGCGATGTGTTCCGTCCGGAAGATTTACGTCTGGTTGAAAGCGTACAGAAAGGGCTGAAATCGCGTGGCTATCGTGGTCAGGGGCGCATCATGGCCGACAGTAGCGGTAGTGGCATTTCCGAACATGGTATCGCCCATTTCCATAATCTGCTGGCGCAGGTGTTTAAGGACTAA", - "dna_sequence_length": 1125, - "functions": [ - "putative YeaWX dioxygenase alpha subunit", - "2Fe-2S cluster" - ], - "id": "CDS_1793", - "location": [ - [ - "NC_000913", - 1884665, - "+", - 1125 - ] - ], - "md5": "937a5cda213edf8607c77ab002ecfeb6", - "parent_gene": "", - "protein_md5": "a1e13d4fd33cd72e46823f303631fee3", - "protein_translation": "MSNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKENVFAKSWICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGKAKNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPNATSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTPANWKNIVDNYLECYHCGPAHPGFSDSVQVDRYWHTMHGNWTLQYGFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPIKGMMTVIYEFPVDSETTLQNYDIYFTNEELTDEQKSLIEWYRDVFRPEDLRLVESVQKGLKSRGYRGQGRIMADSSGSGISEHGIAHFHNLLAQVFKD", - "protein_translation_length": 374, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1803" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76254" - ], - [ - "gene_synonym", - "ECK1801" - ], - [ - "gene_synonym", - "GeneID:946329" - ], - [ - "gene_synonym", - "GI:16129757" - ], - [ - "gene_synonym", - "JW1792" - ], - [ - "gene_synonym", - "EcoGene:EG13510" - ], - [ - "gene_synonym", - "NP_416317.1" - ], - [ - "gene_synonym", - "yeaX" - ], - [ - "gene_synonym", - "ASAP:ABE-0006000" - ] - ], - "dna_sequence": "ATGTCAGACTATCAAATGTTTGAAGTACAGGTGAGCCAGGTTGAACCCCTTACCGAACAGGTGAAACGCTTCACGCTGGTGGCAACCGATGGCAAACCATTACCTGCGTTTACCGGAGGAAGTCACGTCATTGTGCAGATGAGCGATGGTGATAACCAGTACAGCAATGCGTATTCACTACTGAGTTCGCCGCATGACACCTCTTGTTATCAGATTGCCGTTCGGCTGGAGGAAAACTCGCGCGGCGGTTCCCGCTTTTTGCATCAGCAGGTAAAAGTGGGCGATCGGTTAACGATTTCAACGCCTAATAACCTGTTTGCGCTAATTCCCTCAGCCAGAAAGCATCTGTTTATCGCGGGCGGTATTGGTATCACCCCTTTCCTGTCGCACATGGCAGAGCTGCAACACAGCGACGTCGACTGGCAGCTACATTACTGCTCGCGAAATCCAGAAAGTTGCGCATTTCGTGATGAGCTAGTCCAGCATCCGCAGGCTGAGAAAGTCCATTTGCATCATTCATCAACCGGAACACGACTGGAATTAGCGCGATTATTGGCGGATATCGAACCTGGCACACACGTTTATACCTGTGGCCCCGAGGCGCTAATTGAAGCGGTAAGAAGTGAAGCTGCGCGTCTGGACATCGCCGCCGATACGCTGCACTTTGAGCAATTTGCTATCGAAGACAAAACCGGCGATGCATTTACCCTGGTGCTTGCCCGTTCCGGAAAAGAGTTTGTGGTGCCGGAAGAGATGACTATTTTGCAGGTTATTGAAAATAATAAAGCCGCGAAAGTGGAATGTTTATGTCGTGAAGGGGTATGCGGAACCTGCGAAACAGCAATACTGGAAGGTGAAGCTGACCATCGGGATCAATATTTTAGCGATGAAGAGCGTGCCAGCCAGCAAAGTATGTTGATCTGTTGTTCGCGTGCGAAGGGTAAACGCCTGGTGTTGGATTTGTAG", - "dna_sequence_length": 966, - "functions": [ - "putative YeaWX dioxygenase beta subunit, reductase component" - ], - "id": "CDS_1794", - "location": [ - [ - "NC_000913", - 1885845, - "+", - 966 - ] - ], - "md5": "5bacd60a43c952aab02a575a738cdb22", - "parent_gene": "", - "protein_md5": "8547023f8745fbec8a492bb1f27c22fc", - "protein_translation": "MSDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHVIVQMSDGDNQYSNAYSLLSSPHDTSCYQIAVRLEENSRGGSRFLHQQVKVGDRLTISTPNNLFALIPSARKHLFIAGGIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELVQHPQAEKVHLHHSSTGTRLELARLLADIEPGTHVYTCGPEALIEAVRSEAARLDIAADTLHFEQFAIEDKTGDAFTLVLARSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCGTCETAILEGEADHRDQYFSDEERASQQSMLICCSRAKGKRLVLDL", - "protein_translation_length": 321, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1804" - ], - [ - "gene_synonym", - "EcoGene:EG10858" - ], - [ - "gene_synonym", - "ECK1802" - ], - [ - "gene_synonym", - "NP_416318.1" - ], - [ - "gene_synonym", - "rnd" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09155" - ], - [ - "gene_synonym", - "JW1793" - ], - [ - "gene_synonym", - "GeneID:946328" - ], - [ - "gene_synonym", - "ASAP:ABE-0006003" - ], - [ - "gene_synonym", - "GI:16129758" - ] - ], - "dna_sequence": "TTGAATTACCAAATGATTACCACGGACGATGCGCTGGCTTCTTTGTGTGAAGCCGTCCGTGCCTTTCCGGCGATAGCCCTGGATACTGAATTTGTTCGTACGCGCACTTATTACCCGCAGCTGGGGTTGATTCAACTTTTCGATGGCGAGCATCTGGCGCTAATCGATCCACTCGGGATCACCGACTGGTCACCGCTGAAAGCGATCCTGCGCGATCCGTCCATCACAAAATTTCTCCATGCAGGCAGTGAAGATCTGGAAGTGTTCCTCAATGTCTTTGGCGAATTACCACAACCCTTGATTGACACGCAAATCCTTGCTGCCTTCTGCGGACGCCCGATGTCATGGGGTTTCGCTTCCATGGTGGAAGAGTATTCCGGCGTTACGCTGGACAAGAGTGAATCGCGCACCGACTGGCTGGCCAGACCGCTGACCGAACGTCAGTGTGAATACGCAGCGGCGGATGTCTGGTATCTGTTACCGATCACCGCCAAGCTTATGGTAGAAACGGAGGCCTCCGGCTGGCTACCTGCGGCGCTGGATGAATGCCGCCTGATGCAAATGCGTCGTCAGGAAGTCGTTGCGCCGGAAGATGCCTGGCGTGATATCACCAATGCCTGGCAATTACGCACACGCCAACTGGCCTGTCTGCAACTGTTAGCCGACTGGCGACTGCGCAAGGCGCGAGAGCGCGATCTGGCGGTGAACTTTGTCGTGCGTGAAGAGCATTTGTGGTCGGTAGCGCGTTATATGCCGGGAAGTTTAGGCGAACTGGACAGCCTGGGTTTATCCGGTAGCGAAATCCGCTTTCACGGTAAAACGCTGCTAGCGCTGGTGGAAAAAGCGCAGACATTGCCGGAAGATGCCTTACCGCAGCCGATGCTTAACCTGATGGACATGCCGGGTTATCGTAAAGCGTTTAAAGCGATTAAGTCGCTGATTACTGACGTGAGCGAAACGCATAAGATCAGCGCCGAATTGCTGGCATCGCGTCGGCAAATCAACCAACTGCTGAACTGGCACTGGAAACTGAAACCGCAGAACAATTTGCCGGAGCTGATTTCCGGCTGGCGTGGTGAGCTGATGGCGGAAGCATTACACAATTTATTGCAGGAATATCCGCAGTAA", - "dna_sequence_length": 1128, - "functions": [ - "ribonuclease D" - ], - "id": "CDS_1795", - "location": [ - [ - "NC_000913", - 1887991, - "-", - 1128 - ] - ], - "md5": "4e5adccd02603f42d43b7de69112d06e", - "parent_gene": "", - "protein_md5": "c8dc70a31151a1b806b3f6d21f68fdbf", - "protein_translation": "MNYQMITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQILAAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLADWRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLALVEKAQTLPEDALPQPMLNLMDMPGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ", - "protein_translation_length": 375, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946327" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69451" - ], - [ - "gene_synonym", - "b1805" - ], - [ - "gene_synonym", - "ECK1803" - ], - [ - "gene_synonym", - "fadD" - ], - [ - "gene_synonym", - "EcoGene:EG11530" - ], - [ - "gene_synonym", - "JW1794" - ], - [ - "gene_synonym", - "oldD" - ], - [ - "gene_synonym", - "NP_416319.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006005" - ], - [ - "gene_synonym", - "GI:16129759" - ] - ], - "dna_sequence": "TTGAAGAAGGTTTGGCTTAACCGTTATCCCGCGGACGTTCCGACGGAGATCAACCCTGACCGTTATCAATCTCTGGTAGATATGTTTGAGCAGTCGGTCGCGCGCTACGCCGATCAACCTGCGTTTGTGAATATGGGGGAGGTAATGACCTTCCGCAAGCTGGAAGAACGCAGTCGCGCGTTTGCCGCTTATTTGCAACAAGGGTTGGGGCTGAAGAAAGGCGATCGCGTTGCGTTGATGATGCCTAATTTATTGCAATATCCGGTGGCGCTGTTTGGCATTTTGCGTGCCGGGATGATCGTCGTAAACGTTAACCCGTTGTATACCCCGCGTGAGCTTGAGCATCAGCTTAACGATAGCGGCGCATCGGCGATTGTTATCGTGTCTAACTTTGCTCACACACTGGAAAAAGTGGTTGATAAAACCGCCGTTCAGCACGTAATTCTGACCCGTATGGGCGATCAGCTATCTACGGCAAAAGGCACGGTAGTCAATTTCGTTGTTAAATACATCAAGCGTTTGGTGCCGAAATACCATCTGCCAGATGCCATTTCATTTCGTAGCGCACTGCATAACGGCTACCGGATGCAGTACGTCAAACCCGAACTGGTGCCGGAAGATTTAGCTTTTCTGCAATACACCGGCGGCACCACTGGTGTGGCGAAAGGCGCGATGCTGACTCACCGCAATATGCTGGCGAACCTGGAACAGGTTAACGCGACCTATGGTCCGCTGTTGCATCCGGGCAAAGAGCTGGTGGTGACGGCGCTGCCGCTGTATCACATTTTTGCCCTGACCATTAACTGCCTGCTGTTTATCGAACTGGGTGGGCAGAACCTGCTTATCACTAACCCGCGCGATATTCCAGGGTTGGTAAAAGAGTTAGCGAAATATCCGTTTACCGCTATCACGGGCGTTAACACCTTGTTCAATGCGTTGCTGAACAATAAAGAGTTCCAGCAGCTGGATTTCTCCAGTCTGCATCTTTCCGCAGGCGGTGGGATGCCAGTGCAGCAAGTGGTGGCAGAGCGTTGGGTGAAACTGACCGGACAGTATCTGCTGGAAGGCTATGGCCTTACCGAGTGTGCGCCGCTGGTCAGCGTTAACCCATATGATATTGATTATCATAGTGGTAGCATCGGTTTGCCGGTGCCGTCGACGGAAGCCAAACTGGTGGATGATGATGATAATGAAGTACCACCAGGTCAACCGGGTGAGCTTTGTGTCAAAGGACCGCAGGTGATGCTGGGTTACTGGCAGCGTCCCGATGCTACCGATGAAATCATCAAAAATGGCTGGTTACACACCGGCGACATCGCGGTAATGGATGAAGAAGGATTCCTGCGCATTGTCGATCGTAAAAAAGACATGATTCTGGTTTCCGGTTTTAACGTCTATCCCAACGAGATTGAAGATGTCGTCATGCAGCATCCTGGCGTACAGGAAGTCGCGGCTGTTGGCGTACCTTCCGGCTCCAGTGGTGAAGCGGTGAAAATCTTCGTAGTGAAAAAAGATCCATCGCTTACCGAAGAGTCACTGGTGACTTTTTGCCGCCGTCAGCTCACGGGATACAAAGTACCGAAGCTGGTGGAGTTTCGTGATGAGTTACCGAAATCTAACGTCGGAAAAATTTTGCGACGAGAATTACGTGACGAAGCGCGCGGCAAAGTGGACAATAAAGCCTGA", - "dna_sequence_length": 1686, - "functions": [ - "acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase)" - ], - "id": "CDS_1796", - "location": [ - [ - "NC_000913", - 1889746, - "-", - 1686 - ] - ], - "md5": "243e64b9c3bb8f638d231befd3d03527", - "parent_gene": "", - "protein_md5": "0b8f686eb1963da0365445b80a63570b", - "protein_translation": "MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVNMGEVMTFRKLEERSRAFAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNKA", - "protein_translation_length": 561, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006011" - ], - [ - "gene_synonym", - "NP_416320.1" - ], - [ - "gene_synonym", - "b1806" - ], - [ - "gene_synonym", - "GeneID:946312" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA91" - ], - [ - "gene_synonym", - "ECK1804" - ], - [ - "gene_synonym", - "EcoGene:EG13511" - ], - [ - "gene_synonym", - "JW1795" - ], - [ - "gene_synonym", - "yeaY" - ], - [ - "gene_synonym", - "GI:16129760" - ] - ], - "dna_sequence": "ATGGCGGTTCAAAAGAATGTTATCAAAGGCATACTGGCAGGTACGTTTGCGCTAATGCTGAGCGGTTGTGTCACTGTGCCGGACGCCATTAAAGGCAGCAGTCCCACGCCGCAACAAGATTTAGTTCGGGTGATGAGTGCGCCGCAGCTGTACGTTGGTCAGGAGGCACGCTTTGGTGGCAAAGTGGTTGCGGTACAAAACCAGCAAGGGAAAACTCGCCTGGAAATTGCTACCGTACCGCTGGACAGCGGAGCCAGACCGACGCTGGGAGAACCTTCTCGCGGTCGCATTTATGCCGATGTGAACGGTTTTCTGGACCCGGTGGATTTCCGTGGACAACTGGTTACGGTAGTCGGGCCAATCACTGGTGCGGTTGACGGCAAAATCGGCAATACGCCCTATAAATTTATGGTGATGCAAGTAACGGGTTACAAACGTTGGCATTTAACCCAGCAGGTGATTATGCCGCCTCAGCCGATTGATCCATGGTTTTATGGCGGTCGTGGCTGGCCCTATGGCTACGGCGGATGGGGCTGGTATAATCCCGGCCCCGCGAGAGTACAAACAGTTGTAACTGAATAA", - "dna_sequence_length": 582, - "functions": [ - "Slp family lipoprotein, RpoE-regulated" - ], - "id": "CDS_1797", - "location": [ - [ - "NC_000913", - 1890532, - "-", - 582 - ] - ], - "md5": "94bc17e6731763cc46a8e8b698159918", - "parent_gene": "", - "protein_md5": "e6576568a181edce2027623873528bdc", - "protein_translation": "MAVQKNVIKGILAGTFALMLSGCVTVPDAIKGSSPTPQQDLVRVMSAPQLYVGQEARFGGKVVAVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVNGFLDPVDFRGQLVTVVGPITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPIDPWFYGGRGWPYGYGGWGWYNPGPARVQTVVTE", - "protein_translation_length": 193, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tsaB" - ], - [ - "gene_synonym", - "NP_416321.1" - ], - [ - "gene_synonym", - "b1807" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76256" - ], - [ - "gene_synonym", - "ASAP:ABE-0006013" - ], - [ - "gene_synonym", - "ECK1805" - ], - [ - "gene_synonym", - "GeneID:946304" - ], - [ - "gene_synonym", - "EcoGene:EG13512" - ], - [ - "gene_synonym", - "JW1796" - ], - [ - "gene_synonym", - "rpf" - ], - [ - "gene_synonym", - "GI:16129761" - ], - [ - "gene_synonym", - "yeaZ" - ] - ], - "dna_sequence": "ATGCGAATTCTGGCTATCGATACCGCGACAGAGGCCTGCTCTGTCGCCCTGTGGAACGACGGTACTGTCAACGCTCATTTTGAGCTTTGCCCTCGTGAACATACTCAACGAATCTTACCGATGGTGCAGGATATCCTGACCACCAGCGGAACTTCCCTGACTGATATTAACGCTCTGGCTTACGGGCGCGGCCCCGGTAGCTTTACTGGCGTGCGCATTGGTATTGGCATCGCGCAAGGGCTGGCGCTTGGCGCGGAATTACCGATGATTGGCGTCTCCACGCTAATGACGATGGCGCAAGGGGCGTGGCGCAAAAACGGCGCAACCCGCGTGCTGGCAGCCATTGACGCGCGAATGGGCGAAGTTTACTGGGCCGAATATCAGCGTGATGAAAACGGTATCTGGCACGGTGAAGAAACCGAAGCCGTACTCAAACCCGAAATCGTCCATGAACGAATGCAACAGCTTTCCGGCGAATGGGTGACGGTAGGGACGGGCTGGCAAGCTTGGCCGGATCTCGGTAAAGAGAGCGGGCTGGTTTTGCGCGATGGCGAAGTGTTACTGCCTGCTGCTGAAGATATGCTGCCGATTGCGTGTCAGATGTTTGCTGAGGGTAAAACGGTGGCGGTGGAACATGCCGAACCGGTTTATTTACGTAACAACGTCGCATGGAAGAAACTTCCGGGCAAAGAATGA", - "dna_sequence_length": 696, - "functions": [ - "tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein", - "binding partner and protease for TsaD" - ], - "id": "CDS_1798", - "location": [ - [ - "NC_000913", - 1891267, - "-", - 696 - ] - ], - "md5": "99136df323e4fe2c6913a1da9665a066", - "parent_gene": "", - "protein_md5": "e85b00285a9006d7a913031cd385f58f", - "protein_translation": "MRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQDILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGAWRKNGATRVLAAIDARMGEVYWAEYQRDENGIWHGEETEAVLKPEIVHERMQQLSGEWVTVGTGWQAWPDLGKESGLVLRDGEVLLPAAEDMLPIACQMFAEGKTVAVEHAEPVYLRNNVAWKKLPGKE", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yoaA" - ], - [ - "gene_synonym", - "ASAP:ABE-0006016" - ], - [ - "gene_synonym", - "b1808" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76257" - ], - [ - "gene_synonym", - "GeneID:946305" - ], - [ - "gene_synonym", - "ECK1806" - ], - [ - "gene_synonym", - "EcoGene:EG13513" - ], - [ - "gene_synonym", - "NP_416322.1" - ], - [ - "gene_synonym", - "JW1797" - ], - [ - "gene_synonym", - "GI:16129762" - ] - ], - "dna_sequence": "GTGACGGACGATTTTGCACCAGACGGTCAGCTGGCGAAAGCGATACCAGGCTTTAAGCCGCGAGAACCACAGCGACAGATGGCGGTAGCCGTCACCCAGGCGATAGAAAAAGGCCAGCCGCTGGTGGTGGAAGCAGGAACCGGTACGGGCAAAACCTACGCTTACCTGGCTCCTGCGCTGCGGGCGAAAAAGAAAGTCATTATCTCGACCGGCTCAAAAGCGTTGCAGGATCAGCTCTACAGCCGCGATTTGCCAACAGTCTCAAAGGCATTGAAATATACGGGCAACGTGGCGCTGCTGAAAGGGCGCTCAAACTACCTCTGCCTCGAACGTCTCGAACAGCAGGCGCTGGCGGGGGGCGATCTGCCGGTACAAATCTTAAGCGATGTGATCCTGCTGCGCTCCTGGTCTAATCAAACAGTCGATGGTGATATCAGCACCTGCGTCAGCGTGGCGGAAGATTCACAGGCGTGGCCGCTGGTCACCAGCACCAACGACAACTGTCTTGGCAGCGACTGCCCGATGTATAAAGATTGCTTTGTGGTCAAAGCACGTAAAAAAGCGATGGACGCCGATGTGGTGGTGGTAAACCATCATCTCTTTCTGGCGGATATGGTGGTTAAAGAGAGTGGATTTGGCGAACTGATCCCGGAAGCGGACGTCATGATCTTCGACGAAGCCCACCAGCTACCGGACATTGCCAGCCAGTATTTTGGTCAGTCACTCTCCAGTCGACAACTGCTCGACCTGGCAAAAGACATCACCATCGCCTACCGCACCGAATTAAAAGACACCCAGCAGTTACAAAAGTGCGCTGATCGTCTTGCCCAGAGTGCGCAGGATTTTCGTCTGCAACTCGGTGAGCCAGGTTATCGCGGTAACCTGCGTGAGCTGTTAGCTAATCCGCAAATTCAGCGGGCATTTTTACTGCTCGATGACACCCTGGAACTTTGTTATGACGTGGCGAAACTGTCACTGGGGCGTTCCGCCTTGCTGGATGCGGCATTTGAGCGCGCCACGTTGTATCGCACACGGCTGAAGCGGCTAAAAGAGATCAATCAGCCGGGCTACAGCTACTGGTACGAATGCACTTCGCGCCATTTTACTCTGGCTCTCACGCCGCTCAGCGTGGCGGATAAATTCAAAGAGTTAATGGCGCAAAAACCCGGTAGCTGGATCTTCACCTCAGCAACGCTGTCGGTGAACGACGATCTGCATCATTTCACCTCGCGGCTTGGCATCGAACAGGCCGAGTCGTTGCTGTTGCCCAGCCCATTTGATTACAGCCGCCAGGCGTTACTCTGTGTGCTGCGCAATCTGCCGCAAACCAACCAGCCAGGTTCTGCTCGCCAGTTAGCGGCAATGCTGCGACCGATCATCGAAGCTAACAACGGTCGTTGTTTTATGCTTTGTACCTCGCACGCCATGATGCGCGATCTGGCCGAGCAGTTCCGCGCTACCATGACGCTTCCTGTATTGTTGCAGGGGGAAACCAGCAAAGGGCAACTGTTGCAGCAATTTGTCAGCGCCGGTAATGCGCTTCTTGTGGCAACCAGCAGTTTCTGGGAAGGGGTGGACGTGCGTGGCGATACATTGTCATTGGTAATTATCGACAAATTGCCGTTTACCTCGCCGGATGATCCACTGTTAAAAGCGCGCATGGAAGATTGTCGTTTGCGCGGTGGCGACCCGTTCGATGAAGTGCAACTACCAGATGCCGTCATTACTCTCAAACAGGGGGTAGGGCGACTGATTCGCGACGCCGACGATCGTGGCGTGCTGGTGATTTGTGACAATCGGCTGGTGATGCGTCCTTACGGCGCGACGTTTCTCGCCAGTCTGCCGCCCGCGCCACGCACCCGTGACATTGCCCGTGCGGTTCGTTTCCTTGCGATACCATCCTCCAGGTAA", - "dna_sequence_length": 1911, - "functions": [ - "putative ATP-dependent helicase, DinG family" - ], - "id": "CDS_1799", - "location": [ - [ - "NC_000913", - 1893235, - "-", - 1911 - ] - ], - "md5": "40c0404e1649d6a2599b6e7efcfb310b", - "parent_gene": "", - "protein_md5": "9a93dd25c78b27e226024e9779d2b3ed", - "protein_translation": "MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVEAGTGTGKTYAYLAPALRAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKGRSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPLVTSTNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPEADVMIFDEAHQLPDIASQYFGQSLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLANPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDAAFERATLYRTRLKRLKEINQPGYSYWYECTSRHFTLALTPLSVADKFKELMAQKPGSWIFTSATLSVNDDLHHFTSRLGIEQAESLLLPSPFDYSRQALLCVLRNLPQTNQPGSARQLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDADDRGVLVICDNRLVMRPYGATFLASLPPAPRTRDIARAVRFLAIPSSR", - "protein_translation_length": 636, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5295" - ], - [ - "gene_synonym", - "yoaB" - ], - [ - "gene_synonym", - "GeneID:946357" - ], - [ - "gene_synonym", - "b1809" - ], - [ - "gene_synonym", - "ECK1807" - ], - [ - "gene_synonym", - "GI:90111336" - ], - [ - "gene_synonym", - "NP_416323.4" - ], - [ - "gene_synonym", - "EcoGene:EG13514" - ], - [ - "gene_synonym", - "ASAP:ABE-0006020" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEB7" - ] - ], - "dna_sequence": "ATGACTATCGTTCGTATCGATGCTGAAGCCCGCTGGTCTGATGTAGTAATCCACAACAACACGCTCTACTACACTGGTGTACCGGAAAACCTCGACGCCGATGCCTTTGAGCAAACCGCCAACACGCTGGCACAGATTGACGCCGTGCTGGAAAAACAGGGCAGCAATAAATCGAGCATTCTGGATGCCACCATTTTCCTGGCCGATAAAAACGACTTCGCGGCGATGAATAAAGCGTGGGATGCTTGGGTTGTCGCGGGTCATGCGCCGGTGCGCTGCACGGTACAAGCGGGTTTGATGAACCCGAAGTATAAAGTTGAAATTAAGATTGTGGCTGCGGTGTAA", - "dna_sequence_length": 345, - "functions": [ - "putative reactive intermediate deaminase" - ], - "id": "CDS_1800", - "location": [ - [ - "NC_000913", - 1893367, - "+", - 345 - ] - ], - "md5": "4abc9d959ee4a94a46b0d3f0dfec2231", - "parent_gene": "", - "protein_md5": "a3a31d17671eca9f3cc6674aea4faab9", - "protein_translation": "MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLAQIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV", - "protein_translation_length": 114, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yoaC" - ], - [ - "gene_synonym", - "GeneID:946308" - ], - [ - "gene_synonym", - "ECK1808" - ], - [ - "gene_synonym", - "NP_416324.2" - ], - [ - "gene_synonym", - "b1810" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64490" - ], - [ - "gene_synonym", - "JW5296" - ], - [ - "gene_synonym", - "EcoGene:EG13515" - ], - [ - "gene_synonym", - "GI:226524724" - ], - [ - "gene_synonym", - "ASAP:ABE-0006024" - ] - ], - "dna_sequence": "ATGCCTGCTGTAATAGATAAAGCCCTGGATTTCATTGGTGCCATGGATGTATCAGCGCCAACACCAAGTTCGATGAATGAAAGCACGGCGAAGGGAATCTTTAAATATTTAAAAGAACTGGGAGTACCCGCGAGTGCCGCTGATATTACGGCGCGAGCTGACCAGGAAGGCTGGAACCCTGGGTTCACGGAAAAAATGGTTGGATGGGCAAAAAAAATGGAGACAGGTGAACGTTCTGTGATTAAAAATCCTGAATACTTTTCAACATATATGCAGGAAGAACTAAAAGCACTGGTCTGA", - "dna_sequence_length": 300, - "functions": [ - "DUF1889 family protein" - ], - "id": "CDS_1801", - "location": [ - [ - "NC_000913", - 1894133, - "+", - 300 - ] - ], - "md5": "83c48f74c65b29ccd50ffabbafdb0ad2", - "parent_gene": "", - "protein_md5": "d6359e62dc68b2a150cdc8b5427262d7", - "protein_translation": "MPAVIDKALDFIGAMDVSAPTPSSMNESTAKGIFKYLKELGVPASAADITARADQEGWNPGFTEKMVGWAKKMETGERSVIKNPEYFSTYMQEELKALV", - "protein_translation_length": 99, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67338" - ], - [ - "gene_synonym", - "ECK1809" - ], - [ - "gene_synonym", - "b1811" - ], - [ - "gene_synonym", - "yoaH" - ], - [ - "gene_synonym", - "JW1800" - ], - [ - "gene_synonym", - "GeneID:946346" - ], - [ - "gene_synonym", - "EcoGene:EG14306" - ], - [ - "gene_synonym", - "GI:16129765" - ], - [ - "gene_synonym", - "NP_416325.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006026" - ] - ], - "dna_sequence": "ATGTTTGCAGGTTTACCTTCACTCACCCATGAACAGCAGCAAAAAGCTGTCGAGCGGATCCAGGAACTGATGGCACAAGGGATGAGCAGCGGCCAGGCAATCGCGCTGGTGGCAGAAGAGCTGCGTGCCAACCACTCCGGCGAGCGAATCGTGGCGCGTTTTGAGGATGAAGACGAGTAA", - "dna_sequence_length": 180, - "functions": [ - "UPF0181 family protein" - ], - "id": "CDS_1802", - "location": [ - [ - "NC_000913", - 1894731, - "-", - 180 - ] - ], - "md5": "c9c6d6addd47f68b9c48c88c0fabb508", - "parent_gene": "", - "protein_md5": "3ecc229e111a2dda5f13f13566d72467", - "protein_translation": "MFAGLPSLTHEQQQKAVERIQELMAQGMSSGQAIALVAEELRANHSGERIVARFEDEDE", - "protein_translation_length": 59, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1812" - ], - [ - "gene_synonym", - "GeneID:946337" - ], - [ - "gene_synonym", - "ECK1810" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05041" - ], - [ - "gene_synonym", - "JW1801" - ], - [ - "gene_synonym", - "pabB" - ], - [ - "gene_synonym", - "EcoGene:EG10683" - ], - [ - "gene_synonym", - "GI:16129766" - ], - [ - "gene_synonym", - "ASAP:ABE-0006031" - ], - [ - "gene_synonym", - "NP_416326.1" - ] - ], - "dna_sequence": "ATGAAGACGTTATCTCCCGCTGTGATTACTTTACTCTGGCGTCAGGACGCCGCTGAATTTTATTTCTCCCGCTTAAGCCACCTGCCGTGGGCGATGCTTTTACACTCCGGCTATGCCGATCATCCGTATAGCCGCTTTGATATTGTGGTCGCCGAGCCGATTTGCACTTTAACCACTTTCGGTAAAGAAACCGTTGTTAGTGAAAGCGAAAAACGCACAACGACCACTGATGACCCGCTACAGGTGCTCCAGCAGGTGCTGGATCGCGCAGACATTCGCCCAACGCATAACGAAGATTTGCCATTTCAGGGCGGCGCACTGGGGTTGTTTGGCTACGATCTGGGCCGCCGTTTTGAGTCACTGCCAGAAATTGCGGAACAAGATATCGTTCTGCCGGATATGGCAGTGGGTATCTACGATTGGGCGCTCATTGTCGACCACCAGCGTCATACAGTTTCTTTGCTGAGTCATAATGATGTCAATGCCCGTCGGGCCTGGCTGGAAAGCCAGCAATTCTCGCCGCAGGAAGATTTCACGCTCACTTCCGACTGGCAATCCAATATGACCCGCGAGCAGTACGGCGAAAAATTTCGCCAGGTACAGGAATATCTGCACAGCGGTGATTGCTATCAGGTGAATCTCGCCCAACGTTTTCATGCGACCTATTCTGGCGATGAATGGCAGGCATTCCTTCAGCTTAATCAGGCCAACCGCGCGCCATTTAGCGCTTTTTTACGTCTTGAACAGGGTGCAATTTTAAGCCTTTCGCCAGAGCGGTTTATTCTTTGTGATAATAGTGAAATCCAGACCCGCCCGATTAAAGGCACGCTACCACGCCTGCCCGATCCTCAGGAAGATAGCAAACAAGCAGTAAAACTGGCGAACTCAGCGAAAGATCGTGCCGAAAATCTGATGATTGTCGATTTAATGCGTAATGATATCGGTCGTGTTGCCGTAGCAGGTTCGGTAAAAGTACCAGAGCTGTTCGTGGTGGAACCCTTCCCTGCCGTGCATCATCTGGTCAGCACCATAACGGCGCAACTACCAGAACAGTTACACGCCAGCGATCTGCTGCGCGCAGCTTTTCCTGGTGGCTCAATAACCGGGGCTCCGAAAGTACGGGCTATGGAAATTATCGACGAACTGGAACCGCAGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAA", - "dna_sequence_length": 1362, - "functions": [ - "aminodeoxychorismate synthase, subunit I" - ], - "id": "CDS_1803", - "location": [ - [ - "NC_000913", - 1894805, - "+", - 1362 - ] - ], - "md5": "c3577683420bef886bdff6e07575710c", - "parent_gene": "", - "protein_md5": "b1411296cac0e1bc765c50493337e272", - "protein_translation": "MKTLSPAVITLLWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYSRFDIVVAEPICTLTTFGKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPTHNEDLPFQGGALGLFGYDLGRRFESLPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDVNARRAWLESQQFSPQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRFHATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGTLPRLPDPQEDSKQAVKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPFPAVHHLVSTITAQLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCGSIGYLSFCGNMDTSITIRTLTAINGQIFCSAGGGIVADSQEEAEYQETFDKVNRILKQLEK", - "protein_translation_length": 453, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946330" - ], - [ - "gene_synonym", - "nudL" - ], - [ - "gene_synonym", - "b1813" - ], - [ - "gene_synonym", - "yeaB" - ], - [ - "gene_synonym", - "NP_416327.1" - ], - [ - "gene_synonym", - "ECK1811" - ], - [ - "gene_synonym", - "EcoGene:EG12693" - ], - [ - "gene_synonym", - "JW1802" - ], - [ - "gene_synonym", - "GI:16129767" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P43337" - ], - [ - "gene_synonym", - "ASAP:ABE-0006035" - ] - ], - "dna_sequence": "GTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAATCCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTCCGCCGTTGAAGTTATCGGCGTGCTGCCGCCCGTCGATAGCGTCACTGGCTACCAGGTAACCCCAGTGGTCGGCATTATCCCGCCCGATCTGCCGTATCGCGCCAGTGAAGATGAAGTCTCGGCGGTGTTTGAAATGCCGCTCGCCCAGGCATTACATCTGGGTCGTTATCACCCTTTAGATATCTACCGCCGTGGTGATTCACATCGGGTATGGCTGTCCTGGTACGAACAGTATTTTGTATGGGGAATGACCGCAGGCATAATTCGTGAGCTGGCGCTGCAAATTGGTGTGAAACCCTGA", - "dna_sequence_length": 579, - "functions": [ - "putative CoA pyrophosphohydrolase, weak 3-phosphohydroxypyruvate phosphatase" - ], - "id": "CDS_1804", - "location": [ - [ - "NC_000913", - 1896170, - "+", - 579 - ] - ], - "md5": "6c5751fc30c3eae0cd74796636b91648", - "parent_gene": "", - "protein_md5": "7d3f6ef844d8c00f9499d0108daa6485", - "protein_translation": "MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDASAIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVVGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSWYEQYFVWGMTAGIIRELALQIGVKP", - "protein_translation_length": 192, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946331" - ], - [ - "gene_synonym", - "b1814" - ], - [ - "gene_synonym", - "sdaA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16095" - ], - [ - "gene_synonym", - "ECK1812" - ], - [ - "gene_synonym", - "EcoGene:EG10930" - ], - [ - "gene_synonym", - "ASAP:ABE-0006039" - ], - [ - "gene_synonym", - "JW1803" - ], - [ - "gene_synonym", - "GI:16129768" - ], - [ - "gene_synonym", - "NP_416328.1" - ] - ], - "dna_sequence": "GTGATTAGTCTATTCGACATGTTTAAGGTGGGGATTGGTCCCTCATCTTCCCATACCGTAGGGCCTATGAAGGCAGGTAAACAGTTCGTCGATGATCTGGTCGAAAAAGGCTTACTGGATAGCGTTACTCGCGTTGCCGTGGACGTTTATGGTTCACTGTCGCTGACGGGTAAAGGCCACCACACCGATATCGCCATTATTATGGGTCTTGCAGGTAACGAACCTGCCACCGTGGATATCGACAGTATTCCCGGTTTTATTCGCGACGTAGAAGAGCGCGAACGTCTGCTGCTGGCACAGGGACGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATGCAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTGGGTAAACATGTTTGCGCTGGCAGTTAACGAAGAAAACGCCGCCGGTGGTCGTGTGGTAACTGCGCCAACCAACGGTGCCTGCGGTATCGTTCCGGCAGTGCTGGCTTACTATGACCACTTTATTGAATCGGTCAGCCCGGACATCTATACCCGTTACTTTATGGCAGCGGGCGCGATTGGTGCATTGTATAAAATGAACGCCTCTATTTCCGGTGCGGAAGTTGGTTGCCAGGGCGAAGTGGGTGTTGCCTGTTCAATGGCTGCTGCGGGTCTTGCAGAACTGCTGGGCGGTAGCCCGGAACAGGTTTGCGTGGCGGCGGAAATTGGCATGGAACACAACCTTGGTTTAACCTGCGACCCGGTTGCAGGGCAGGTTCAGGTGCCGTGCATTGAGCGTAATGCCATTGCCTCTGTGAAGGCGATTAACGCCGCGCGGATGGCTCTGCGCCGCACCAGTGCACCGCGCGTCTCGCTGGATAAGGTCATCGAAACGATGTACGAAACCGGTAAGGACATGAACGCCAAATACCGCGAAACCTCACGCGGTGGTCTGGCAATCAAAGTCCAGTGTGACTAA", - "dna_sequence_length": 1365, - "functions": [ - "L-serine dehydratase 1" - ], - "id": "CDS_1805", - "location": [ - [ - "NC_000913", - 1896932, - "+", - 1365 - ] - ], - "md5": "85e50be6f5266d4b648f8631f89a12c1", - "parent_gene": "", - "protein_md5": "bf7216a4226d57d3a3421b46058d0606", - "protein_translation": "MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDSVTRVAVDVYGSLSLTGKGHHTDIAIIMGLAGNEPATVDIDSIPGFIRDVEERERLLLAQGRHEVDFPRDNGMRFHNGNLPLHENGMQIHAYNGDEVVYSKTYYSIGGGFIVDEEHFGQDAANEVSVPYPFKSATELLAYCNETGYSLSGLAMQNELALHSKKEIDEYFAHVWQTMQACIDRGMNTEGVLPGPLRVPRRASALRRMLVSSDKLSNDPMNVIDWVNMFALAVNEENAAGGRVVTAPTNGACGIVPAVLAYYDHFIESVSPDIYTRYFMAAGAIGALYKMNASISGAEVGCQGEVGVACSMAAAGLAELLGGSPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPCIERNAIASVKAINAARMALRRTSAPRVSLDKVIETMYETGKDMNAKYRETSRGGLAIKVQCD", - "protein_translation_length": 454, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1815" - ], - [ - "gene_synonym", - "GeneID:946336" - ], - [ - "gene_synonym", - "yoaD" - ], - [ - "gene_synonym", - "ASAP:ABE-0006043" - ], - [ - "gene_synonym", - "ECK1813" - ], - [ - "gene_synonym", - "GI:90111337" - ], - [ - "gene_synonym", - "adrB" - ], - [ - "gene_synonym", - "JW1804" - ], - [ - "gene_synonym", - "EcoGene:EG13516" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76261" - ], - [ - "gene_synonym", - "NP_416329.4" - ] - ], - "dna_sequence": "ATGCAAAAAGCACAACGGATCATTAAAACCTATCGTCGTAATCGAATGATTGTTTGTACGATTTGCGCACTCGTTACGCTCGCTTCGACCCTGAGCGTGCGATTTATTTCACAGCGTAACTTAAATCAACAACGGGTAGTACAATTCGCCAATCACGCTGTAGAGGAATTAGATAAAGTACTGCTTCCCCTACAGGCAGGTAGCGAAGTCTTGCTTCCGCTGATTGGTCTGCCCTGCTCTGTCGCCCATTTGCCATTACGTAAACAGGCGGCAAAACTCCAAACTGTGCGATCCATTGGCCTGGTGCAAGACGGCACACTTTATTGCTCCAGCATTTTTGGTTATCGCAATGTGCCCGTCGTGGACATTCTGGCTGAACTTCCTGCACCGCAACCACTTTTACGCCTGACGATCGACCGTGCCCTGATTAAAGGCAGTCCGGTTTTGATTCAATGGACGCCTGCAGCGGGCAGTAGCAATGCTGGGGTCATGGAGATGATTAACATCGACTTACTGACGGCAATGCTGCTTGAGCCACAACTGCCGCAAATCAGTAGCGCCAGCCTGACGGTGGACAAACGGCATTTGCTCTATGGTAATGGGCTGGTAGATTCCCTTCCGCAACCTGAAGACAATGAAAACTATCAGGTTTCTTCGCAACGCTTTCCTTTTACCATTAACGTTAATGGTCCGGGGGCTACGGCGCTGGCATGGCACTATCTTCCAACACAATTACCGCTGGCGGTGCTGCTAAGTTTACTGGTGGGCTACATCGCCTGGCTGGCGACCGCTTACCGAATGAGCTTTTCCCGCGAAATCAATCTGGGCCTGGCGCAACATGAGTTCGAATTGTTCTGTCAGCCTTTGCTTAATGCGCGCAGCCAGCAATGTATTGGTGTAGAGATTTTGCTGCGCTGGAACAATCCGCGTCAGGGCTGGATTTCACCGGATGTGTTTATTCCTATCGCGGAAGAACATCATTTAATTGTGCCACTGACCCGCTATGTGATGGCAGAAACCATTCGTCAGCGCCATGTTTTCCCGATGAGTAGTCAGTTTCATGTTGGCATTAACGTCGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGCTCGTTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTATTTGTACGCACAGCCGATGCCGCTACGTGATTTTCCCAAATGGCTGGCGGGCAGCCAACCGCCGCCCGCCCGGCATAATGGACATATCACGCCCATTATGCCGTTACGTTAA", 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- "gene_synonym", - "b1816" - ], - [ - "gene_synonym", - "GeneID:946335" - ], - [ - "gene_synonym", - "yoaE" - ], - [ - "gene_synonym", - "ECK1814" - ], - [ - "gene_synonym", - "ASAP:ABE-0006045" - ], - [ - "gene_synonym", - "NP_416330.1" - ], - [ - "gene_synonym", - "JW1805" - ], - [ - "gene_synonym", - "borG" - ], - [ - "gene_synonym", - "EcoGene:EG13517" - ], - [ - "gene_synonym", - "GI:16129770" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEC0" - ] - ], - "dna_sequence": "ATGGAATTCTTAATGGACCCCTCAATTTGGGCGGGGCTACTCACGCTTGTTGTTCTCGAAATTGTGCTGGGTATCGATAACCTGGTCTTCATCGCCATTCTTGCTGACAAACTGCCGCCAAAACAACGCGATAAAGCGCGTTTGCTGGGGTTATCACTGGCGCTGATTATGCGTCTGGGGCTGCTGTCGCTGATTTCATGGATGGTCACGCTGACCAAACCGCTATTTACCGTCATGGATTTCTCCTTCTCCGGACGCGACCTGATTATGTTGTTCGGGGGGATATTCTTGCTGTTCAAAGCAACAACCGAACTGCATGAACGGCTGGAAAACCGCGATCATGATTCCGGCCACGGTAAAGGCTACGCCAGTTTCTGGGTGGTCGTCACACAGATTGTCATCCTTGACGCCGTCTTCTCGTTGGATGCGGTAATTACTGCAGTAGGGATGGTTAACCATCTGCCGGTGATGATGGCGGCGGTAGTGATTGCGATGGCGGTTATGTTGCTGGCATCCAAACCGCTGACGCGATTCGTTAACCAGCACCCCACGGTGGTGGTGCTCTGTCTGAGCTTCCTGTTAATGATTGGTCTGAGTCTGGTGGCAGAAGGTTTCGGTTTCCACATTCCGAAAGGTTACCTGTATGCCGCGATTGGCTTCTCGATCATCATCGAAGTGTTTAACCAGATTGCGCGTCGCAACTTTATTCGCCACCAGTCGACTTTGCCGCTGCGAGCGCGTACTGCCGATGCCATCCTGCGTTTGATGGGCGGGAAACGTCAGGCCAATGTTCAGCACGATGCCGATAACCCGATGCCGATGCCGATCCCGGAAGGTGCATTTGCCGAAGAAGAACGTTACATGATTAACGGCGTACTGACGCTGGCGTCGCGTTCTCTGCGCGGGATCATGACGCCGCGCGGTGAAATAAGCTGGGTTGACGCTAATCTCGGGGTCGATGAAATCCGCGAGCAACTGCTCTCTTCACCGCACAGTCTGTTCCCGGTATGTCGCGGTGAACTGGATGAAATCATCGGTATTGTACGTGCTAAAGAACTGCTGGTGGCGCTGGAAGAGGGCGTTGATGTGGCGGCGATTGCTTCGGCGTCTCCGGCGATTATCGTCCCGGAAACCCTCGATCCGATCAACCTGTTGGGCGTGCTGCGTCGTGCTCGCGGGAGCTTTGTTATCGTGACCAACGAGTTTGGTGTGGTACAAGGTCTGGTCACGCCGCTGGATGTGCTGGAAGCCATTGCGGGTGAATTCCCGGACGCTGACGAAACGCCGGAAATCATTACTGATGGTGACGGCTGGCTGGTAAAAGGCGGTACAGATTTGCATGCCTTGCAGCAGGCGCTTGATGTTGAGCACCTTGCCGATGACGATGATATCGCGACGGTCGCGGGCCTCGTGATCTCGGCAAATGGTCACATTCCCCGTGTGGGCGATGTGATTGATGTAGGGCCACTGCATATCACCATCATTGAAGCCAATGATTATCGTGTTGATCTGGTTCGCATTGTTAAAGAGCAACCGGCGCACGATGAAGATGAGTAA", 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- ], - [ - "gene_synonym", - "GeneID:946334" - ], - [ - "gene_synonym", - "manX" - ], - [ - "gene_synonym", - "ASAP:ABE-0006054" - ], - [ - "gene_synonym", - "ECK1815" - ], - [ - "gene_synonym", - "EcoGene:EG10567" - ], - [ - "gene_synonym", - "NP_416331.1" - ], - [ - "gene_synonym", - "mpt" - ], - [ - "gene_synonym", - "ptsL" - ], - [ - "gene_synonym", - "JW1806" - ], - [ - "gene_synonym", - "gptB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69797" - ], - [ - "gene_synonym", - "GI:16129771" - ] - ], - "dna_sequence": "GTGACCATTGCTATTGTTATAGGCACACATGGTTGGGCTGCAGAGCAGTTGCTTAAAACGGCAGAAATGCTGTTAGGCGAGCAGGAAAACGTCGGCTGGATCGATTTCGTTCCAGGTGAAAATGCCGAAACGCTGATTGAAAAGTACAACGCTCAGTTGGCAAAACTCGACACCACTAAAGGCGTGCTGTTTCTCGTTGATACATGGGGAGGCAGCCCGTTCAATGCTGCCAGCCGCATTGTCGTCGACAAAGAGCATTATGAAGTCATTGCAGGCGTTAACATTCCAATGCTCGTGGAAACGTTAATGGCCCGTGATGATGACCCAAGCTTTGATGAACTGGTGGCACTGGCAGTAGAAACAGGCCGTGAAGGCGTGAAAGCACTGAAAGCCAAACCGGTTGAAAAAGCCGCGCCAGCACCCGCTGCCGCAGCACCAAAAGCGGCTCCAACTCCGGCAAAACCAATGGGGCCAAACGACTACATGGTTATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGAAACCAATGTCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCACCCAGGTTGCACCTCCGGGCGTAACAGCACACGTAGTTGATGTTGCCAAAATGATTCGCGTCTACAACAACCCGAAATATGCTGGCGAACGCGTAATGCTGTTATTTACCAACCCAACAGATGTAGAGCGTCTCGTTGAAGGCGGCGTGAAAATCACCTCTGTTAACGTCGGTGGTATGGCATTCCGTCAGGGTAAAACCCAGGTGAATAACGCGGTTTCGGTTGATGAAAAAGATATCGAGGCGTTCAAGAAACTGAATGCGCGCGGTATTGAGCTGGAAGTCCGTAAGGTTTCCACCGATCCGAAACTGAAAATGATGGATCTGATCAGCAAAATCGATAAGTAA", - "dna_sequence_length": 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"gene_synonym", - "ASAP:ABE-0006056" - ], - [ - "gene_synonym", - "ECK1816" - ], - [ - "gene_synonym", - "b1818" - ], - [ - "gene_synonym", - "pel" - ], - [ - "gene_synonym", - "JW1807" - ], - [ - "gene_synonym", - "GI:16129772" - ], - [ - "gene_synonym", - "EcoGene:EG10568" - ] - ], - "dna_sequence": "ATGGAGATTACCACTCTTCAAATTGTGCTGGTATTTATCGTAGCCTGTATCGCAGGTATGGGATCAATCCTCGATGAATTTCAGTTTCACCGTCCGCTAATCGCGTGTACCCTGGTGGGTATCGTTCTTGGGGATATGAAAACCGGTATTATTATCGGTGGTACGCTGGAAATGATCGCGCTGGGCTGGATGAACATCGGTGCTGCAGTTGCGCCTGACGCCGCTCTGGCTTCTATCATTTCTACCATTCTGGTTATCGCAGGTCATCAGAGCATTGGTGCAGGTATCGCACTGGCAATCCCTCTGGCCGCTGCGGGCCAGGTACTGACCATCATCGTTCGTACTATTACCGTTGCTTTCCAGCACGCTGCGGATAAGGCTGCTGATAACGGCAACCTGACAGCGATTTCCTGGATCCACGTTTCTTCTCTGTTCCTGCAAGCAATGCGTGTGGCTATTCCGGCCGTCATCGTTGCGCTGTCTGTTGGTACCAGCGAAGTACAGAACATGCTGAATGCGATTCCGGAAGTGGTGACCAATGGTCTGAATATCGCCGGTGGCATGATCGTGGTGGTTGGTTATGCGATGGTTATCAACATGATGCGTGCTGGCTACCTGATGCCGTTCTTCTACCTCGGCTTCGTAACCGCAGCATTCACCAACTTTAACCTGGTTGCTCTGGGTGTGATTGGTACTGTTATGGCAGTGCTCTACATCCAACTTAGCCCGAAATACAACCGCGTAGCCGGTGCGCCTGCTCAGGCAGCTGGTAACAACGATCTCGATAACGAACTGGACTAA", - "dna_sequence_length": 801, - "functions": [ - "mannose-specific enzyme IIC component of PTS" - ], - "id": "CDS_1809", - "location": [ - [ - "NC_000913", - 1903082, - "+", - 801 - ] - ], - "md5": "704ddac626445dba31a18c14492bda07", - "parent_gene": "", - "protein_md5": "4c553198e7900ab1cdf0390884503954", - "protein_translation": "MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLGDMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPLAAAGQVLTIIVRTITVAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVALSVGTSEVQNMLNAIPEVVTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGTVMAVLYIQLSPKYNRVAGAPAQAAGNNDLDNELD", - "protein_translation_length": 266, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ptsX" - ], - [ - "gene_synonym", - "ASAP:ABE-0006058" - ], - [ - "gene_synonym", - "NP_416333.4" - ], - [ - "gene_synonym", - "manZ" - ], - [ - "gene_synonym", - "GeneID:946342" - ], - [ - "gene_synonym", - "b1819" - ], - [ - "gene_synonym", - "ECK1817" - ], - [ - "gene_synonym", - "mpt" - ], - [ - "gene_synonym", - "ptsM" - ], - [ - "gene_synonym", - "GI:345452720" - ], - [ - "gene_synonym", - "gptB" - ], - [ - "gene_synonym", - "JW1808" - ], - [ - "gene_synonym", - "EcoGene:EG10569" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69805" - ] - ], - "dna_sequence": "ATGGTTGATACAACTCAAACTACCACCGAGAAAAAACTCACTCAAAGTGATATTCGTGGCGTCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTGGGTTTCTGCTTCTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTATTCGCCGTCACCTGGAGTTCTTTAACACCCAGCCGTTCGTGGCTGCGCCGATTCTCGGCGTAACCCTGGCGCTGGAAGAACAGCGTGCTAATGGCGCAGAGATCGACGACGGTGCTATCAACGGTATCAAAGTCGGTTTGATGGGGCCACTGGCTGGTGTAGGCGACCCGATCTTCTGGGGAACCGTACGTCCGGTATTTGCAGCACTGGGTGCCGGTATCGCGATGAGCGGCAGCCTGTTAGGTCCGCTGCTGTTCTTCATCCTGTTTAACCTGGTGCGTCTGGCAACCCGTTACTACGGCGTAGCGTATGGTTACTCCAAAGGTATCGATATCGTTAAAGATATGGGTGGTGGCTTCCTGCAAAAACTGACGGAAGGGGCGTCTATCCTCGGCCTGTTTGTCATGGGGGCATTGGTTAACAAGTGGACACATGTCAACATCCCGCTGGTTGTCTCTCGCATTACTGACCAGACGGGCAAAGAACACGTTACTACTGTCCAGACTATTCTGGACCAGTTAATGCCAGGCCTGGTACCACTGCTGCTGACCTTTGCTTGTATGTGGCTACTGCGCAAAAAAGTTAACCCGCTGTGGATCATCGTTGGCTTCTTCGTCATCGGTATCGCTGGTTACGCTTGCGGCCTGCTGGGACTGTAA", - "dna_sequence_length": 852, - "functions": [ - "mannose-specific enzyme IID component of PTS" - ], - "id": "CDS_1810", - "location": [ - [ - "NC_000913", - 1903895, - "+", - 852 - ] - ], - "md5": "f88c26e16e6031bc352843dff4584510", - "parent_gene": "", - "protein_md5": "48ceeff369173479995acd1316efe884", - "protein_translation": "MVDTTQTTTEKKLTQSDIRGVFLRSNLFQGSWNFERMQALGFCFSMVPAIRRLYPENNEARKQAIRRHLEFFNTQPFVAAPILGVTLALEEQRANGAEIDDGAINGIKVGLMGPLAGVGDPIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLATRYYGVAYGYSKGIDIVKDMGGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVSRITDQTGKEHVTTVQTILDQLMPGLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGYACGLLGL", - "protein_translation_length": 283, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1818" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67601" - ], - [ - "gene_synonym", - "ASAP:ABE-0006062" - ], - [ - "gene_synonym", - "NP_416334.1" - ], - [ - "gene_synonym", - "yobD" - ], - [ - "gene_synonym", - "EcoGene:EG13948" - ], - [ - "gene_synonym", - "GeneID:946343" - ], - [ - "gene_synonym", - "GI:16129774" - ], - [ - "gene_synonym", - "JW1809" - ], - [ - "gene_synonym", - "b1820" - ] - ], - "dna_sequence": "ATGACAATCACGGACCTGGTACTGATTCTTTTCATCGCCGCACTCCTGGCCTTCGCGATCTACGATCAGTTCATCATGCCCCGCCGTAACGGCCCCACCCTGCTGGCAATTCCTTTGCTCCGGCGTGGTCGCATCGATAGCGTTATCTTCGTCGGATTGATTGTCATTCTTATCTATAACAACGTCACGAATCATGGTGCGTTAATAACGACATGGTTATTAAGCGCACTGGCTCTGATGGGTTTTTATATATTCTGGATCCGCGTTCCGAAGATCATCTTTAAACAAAAAGGTTTTTTCTTCGCCAATGTCTGGATTGAATATAGCCGAATCAAAGCGATGAACTTGTCGGAAGATGGCGTGTTGGTGATGCAATTAGAACAGCGTCGGCTGTTAATCCGCGTTCGAAATATCGACGATCTGGAAAAAATTTATAAGCTTCTCGTTTCAACTCAATAA", - "dna_sequence_length": 459, - "functions": [ - "UPF0266 family inner membrane protein" - ], - "id": "CDS_1811", - "location": [ - [ - "NC_000913", - 1904801, - "+", - 459 - ] - ], - "md5": "a61dc44ed1140d302bcc8ae63d4ea846", - "parent_gene": "", - "protein_md5": "47db7125f51b03a68b3081b13ec28e24", - "protein_translation": "MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGRIDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFANVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLVSTQ", - "protein_translation_length": 152, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1819" - ], - [ - "gene_synonym", - "EcoGene:EG14012" - ], - [ - "gene_synonym", - "GI:162135903" - ], - [ - "gene_synonym", - "ASAP:ABE-0006065" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76264" - ], - [ - "gene_synonym", - "NP_416335.4" - ], - [ - "gene_synonym", - "yebN" - ], - [ - "gene_synonym", - "GeneID:946341" - ], - [ - "gene_synonym", - "JW5830" - ], - [ - "gene_synonym", - "mntP" - ], - [ - "gene_synonym", - "b1821" - ] - ], - "dna_sequence": "ATGAATATCACTGCTACTGTTCTTCTTGCGTTTGGTATGTCGATGGATGCATTTGCTGCATCAATCGGTAAAGGTGCCACCCTCCATAAACCGAAATTTTCTGAAGCATTGCGAACCGGCCTTATTTTTGGTGCCGTCGAAACCCTGACGCCGCTGATCGGCTGGGGAATGGGCATGTTAGCCAGCCGGTTTGTCCTTGAATGGAACCACTGGATTGCGTTTGTGCTGCTGATATTCCTCGGCGGGCGAATGATTATTGAGGGTTTTCGTGGCGCAGATGATGAAGATGAAGAGCCGCGCCGTCGACACGGTTTCTGGCTACTGGTAACCACCGCGATTGCCACCAGCCTGGATGCCATGGCTGTGGGTGTTGGTCTTGCTTTCCTGCAGGTCAACATTATCGCGACCGCATTGGCCATTGGTTGTGCAACCTTGATTATGTCAACATTAGGGATGATGGTTGGTCGCTTTATCGGCTCAATTATTGGGAAAAAAGCGGAAATTCTCGGCGGGCTGGTGCTGATCGGCATCGGCGTCCAGATCCTCTGGACGCACTTCCACGGTTAA", - "dna_sequence_length": 567, - "functions": [ - "putative Mn(2+) efflux pump, mntR-regulated" - ], - "id": "CDS_1812", - "location": [ - [ - "NC_000913", - 1905688, - "+", - 567 - ] - ], - "md5": "4fb3838e73a4b15c86fe3e5ba627f9be", - "parent_gene": "", - "protein_md5": "2e547cbfa43d1e49e46c633015a4edae", - "protein_translation": "MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQILWTHFHG", - "protein_translation_length": 188, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006067" - ], - [ - "gene_synonym", - "rrmA" - ], - [ - "gene_synonym", - "GeneID:946340" - ], - [ - "gene_synonym", - "rlmA" - ], - [ - "gene_synonym", - "yebH" - ], - [ - "gene_synonym", - "ECK1820" - ], - [ - "gene_synonym", - "EcoGene:EG12207" - ], - [ - "gene_synonym", - "b1822" - ], - [ - "gene_synonym", - "NP_416336.1" - ], - [ - "gene_synonym", - "GI:16129776" - ], - [ - "gene_synonym", - "JW1811" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36999" - ] - ], - "dna_sequence": "ATGTCTTTTTCCTGTCCACTTTGCCATCAGCCTCTTTCGCGTGAAAAAAACAGCTATATCTGTCCCCAGCGACATCAGTTTGATATGGCGAAAGAAGGGTATGTCAATCTGCTGCCCGTTCAGCATAAACGGTCTCGTGATCCGGGCGACAGCGCGGAAATGATGCAAGCACGCCGCGCATTCTTAGATGCCGGACATTATCAGCCGCTGCGTGATGCAATTGTCGCCCAACTGAGGGAACGGCTTGATGATAAGGCCACGGCGGTGCTGGATATTGGCTGTGGTGAAGGGTATTACACACACGCATTTGCCGATGCGTTGCCCGAAATCACCACGTTTGGTCTGGATGTTTCGAAGGTAGCGATAAAAGCGGCGGCGAAACGCTATCCGCAGGTCACTTTTTGTGTCGCTTCCAGCCACCGTTTGCCGTTTTCCGATACCAGTATGGACGCCATAATACGTATTTACGCGCCGTGTAAAGCAGAAGAATTAGCACGAGTAGTGAAGCCCGGCGGCTGGGTCATTACTGCCACGCCGGGACCGCGACATTTGATGGAGCTGAAGGGGCTGATTTACAATGAAGTACATCTTCATGCACCTCATGCAGAACAACTGGAAGGTTTTACATTACAGCAGAGTGCGGAGTTGTGTTATCCGATGCGTCTTCGCGGTGATGAAGCCGTCGCATTATTGCAGATGACGCCGTTTGCCTGGCGTGCGAAGCCAGAAGTCTGGCAAACACTGGCAGCAAAAGAAGTGTTCGACTGCCAGACGGACTTTAATATTCACCTCTGGCAGCGTTCTTATTAA", - "dna_sequence_length": 810, - "functions": [ - "23S rRNA m(1)G745 methyltransferase, SAM-dependent" - ], - "id": "CDS_1813", - "location": [ - [ - "NC_000913", - 1907060, - "-", - 810 - ] - ], - "md5": "2c1145e26cd38808221f986ff78a46eb", - "parent_gene": "", - "protein_md5": "ef043d767ee531f86c186a863bf7fcef", - "protein_translation": "MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKRSRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCKAEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCYPMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY", - "protein_translation_length": 269, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416337.1" - ], - [ - "gene_synonym", - "GeneID:946339" - ], - [ - "gene_synonym", - "ASAP:ABE-0006070" - ], - [ - "gene_synonym", - "JW1812" - ], - [ - "gene_synonym", - "EcoGene:EG12204" - ], - [ - "gene_synonym", - "ECK1821" - ], - [ - "gene_synonym", - "msmB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9Y6" - ], - [ - "gene_synonym", - "b1823" - ], - [ - "gene_synonym", - "GI:16129777" - ], - [ - "gene_synonym", - "cspC" - ] - ], - "dna_sequence": "ATGGCAAAGATTAAAGGTCAGGTTAAGTGGTTCAACGAGTCTAAAGGTTTTGGCTTCATTACTCCGGCTGATGGCAGCAAAGATGTGTTCGTACACTTCTCCGCTATCCAGGGTAATGGCTTCAAAACTCTGGCTGAAGGTCAGAACGTTGAGTTCGAAATTCAGGACGGCCAGAAAGGTCCGGCAGCTGTTAACGTAACAGCTATCTGA", - "dna_sequence_length": 210, - "functions": [ - "stress protein, member of the CspA-family" - ], - "id": "CDS_1814", - "location": [ - [ - "NC_000913", - 1907435, - "-", - 210 - ] - ], - "md5": "217ff7976bb3c819231b5eecab59a918", - "parent_gene": "", - "protein_md5": "2438b21594d2be1ec72263acfe9ba76f", - "protein_translation": "MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNVEFEIQDGQKGPAAVNVTAI", - "protein_translation_length": 69, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006072" - ], - [ - "gene_synonym", - "yobF" - ], - [ - "gene_synonym", - "NP_416338.1" - ], - [ - "gene_synonym", - "GeneID:946338" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64508" - ], - [ - "gene_synonym", - "GI:16129778" - ], - [ - "gene_synonym", - "ECK1822" 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"gene_synonym", - "yebO" - ], - [ - "gene_synonym", - "GI:16129779" - ], - [ - "gene_synonym", - "ECK1823" - ], - [ - "gene_synonym", - "JW1814" - ], - [ - "gene_synonym", - "b1825" - ] - ], - "dna_sequence": "ATGAACGAAGTTGTAAATTCAGGCGTGATGAACATTGCGTCTTTGGTTGTATCGGTGGTGGTTCTTCTTATCGGGCTCATCTTGTGGTTTTTTATCAATCGTGCCAGTTCACGGACTAACGAACAGATTGAACTGCTTGAGGCGTTGCTGGATCAGCAAAAACGTCAAAATGCACTGTTACGTCGTTTGTGCGAAGCAAACGAACCAGAGAAAGCAGATAAAAAGACCGTTGAGAGTCAAAAATCGGTTGAAGACGAAGATATTATTCGTCTGGTCGCCGAACGATAA", - "dna_sequence_length": 288, - "functions": [ - "putative inner membrane protein" - ], - "id": "CDS_1816", - "location": [ - [ - "NC_000913", - 1908548, - "-", - 288 - ] - ], - "md5": "c1ca43b3931ec3673b556bada6ae112d", - "parent_gene": "", - "protein_md5": "7f0d0bca562eeaf47b0b6aa2a0147d5b", - "protein_translation": "MNEVVNSGVMNIASLVVSVVVLLIGLILWFFINRASSRTNEQIELLEALLDQQKRQNALLRRLCEANEPEKADKKTVESQKSVEDEDIIRLVAER", - "protein_translation_length": 95, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14383" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64512" - ], - [ - "gene_synonym", - "yobG" - ], - [ - "gene_synonym", - "ASAP:ABE-0006078" - ], - [ - "gene_synonym", - "mgrB" - ], - [ - "gene_synonym", - "ECK1824" - ], - [ - "gene_synonym", - "NP_416340.1" - ], - [ - "gene_synonym", - "GeneID:946351" - ], - [ - "gene_synonym", - "JW1815" - ], - [ - "gene_synonym", - "b1826" - ], - [ - "gene_synonym", - "GI:16129780" - ] - ], - "dna_sequence": "GTGAAAAAGTTTCGATGGGTCGTTCTGGTTGTCGTGGTGTTGGCTTGCTTGCTGCTTTGGGCGCAGGTATTCAACATGATGTGCGATCAGGATGTACAATTTTTCAGCGGAATTTGTGCCATTAACCAGTTTATCCCGTGGTGA", - "dna_sequence_length": 144, - "functions": [ - "regulatory peptide for PhoPQ, feedback inhibition" - ], - "id": "CDS_1817", - "location": [ - [ - "NC_000913", - 1908766, - "-", - 144 - ] - ], - "md5": "8ec3332f9e31f66b91b2129a4e43f110", - "parent_gene": "", - "protein_md5": "f991b6c9251fb6684297a1ec9f6c5669", - "protein_translation": 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"ATGGCTAACGCAGATCTGGATAAACAGCCTGATTCTGTATCTTCCGTGCTAAAAGTTTTTGGCATTTTGCAGGCGCTGGGTGAAGAGCGCGAAATAGGGATAACCGAGCTGTCGCAGCGCGTCATGATGTCAAAAAGCACCGTTTATCGCTTTTTACAGACCATGAAAACCTTAGGTTATGTGGCGCAGGAAGGGGAGTCGGAGAAATATTCCCTGACCCTGAAATTGTTTGAACTGGGCGCTCGCGCGTTACAAAACGTCGATTTAATTCGTAGCGCAGATATCCAGATGCGTGAGCTCTCCCGCCTGACCAAAGAAACTATCCACCTCGGCGCACTGGACGAAGACAGTATTGTTTACATTCACAAAATTGACTCTATGTACAATTTGCGCATGTATTCACGGATTGGGCGTCGTAATCCGCTGTACAGCACCGCGATTGGTAAGGTACTGCTGGCATGGCGCGATCGCGATGAAGTGAAGCAAATTCTTGAGGGCGTGGAGTATAAACGCAGTACCGAGCGGACCATCACCAGTACAGAAGCGTTATTACCCGTTCTGGACCAGGTGCGCGAGCAGGGGTATGGCGAAGATAATGAAGAGCAGGAAGAAGGGCTGCGATGCATTGCGGTACCGGTATTTGATCGCTTTGGCGTGGTCATTGCCGGTTTGAGCATCTCCTTCCCGACGTTGCGTTTCTCTGAAGAGCGTTTACAGGAATATGTCGCAATGTTGCATACCGCAGCGCGCAAAATTTCTGCCCAAATGGGTTATCACGACTATCCGTTCTGA", - "dna_sequence_length": 792, - "functions": [ - "KDG regulon transcriptional repressor" - ], - "id": "CDS_1819", - "location": [ - [ - "NC_000913", - 1910099, - "-", - 792 - ] - ], - "md5": 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"ATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCAGCGATACGGTGCGATATTAACCATTGTGATTGGTATTTCGATGGCCGTCCTTGACGGCGCAATCGCCAACGTCGCCCTGCCAACAATCGCCACGGACCTTCATGCCACGCCAGCCAGTTCCATCTGGGTAGTGAACGCCTATCAAATCGCCATTGTCATCTCCCTGCTCTCGTTTTCGTTTCTGGGCGATATGTTTGGCTATCGACGTATTTATAAATGCGGTCTGGTCGTTTTTCTGTTGTCTTCACTGTTCTGCGCCCTTTCTGATTCGCTGCAAATGCTCACCCTTGCGCGTGTCATACAAGGTTTCGGCGGTGCAGCGTTGATGAGCGTTAATACCGCACTTATCCGCCTGATCTATCCACAACGTTTTCTGGGTAGAGGGATGGGCATAAACTCGTTTATTGTTGCCGTCTCTTCTGCTGCCGGGCCGACAATTGCTGCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTAGGTATTATCGCCCTGCTTCTGGCGATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCGCCGTGATGAACGCGTTAACCTTCGGCCTGCTTATCACTGCGTTGAGTGGTTTCGCTCAGGGGCAATCGCTGACGTTAATTGCTGCGGAACTGGTGGTAATGGTTGTTGTTGGTATTTTCTTTATTCGCCGCCAGCTTTCTCTTCCCGTACCGCTGCTACCGGTGGATTTACTGCGTATCCCGCTGTTTTCACTTTCTATTTGCACATCTGTTTGCTCTTTCTGCGCACAAATGCTGGCAATGGTTTCCCTGCCCTTTTACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATGGCTCCGCTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTGGGGGCTTTAGGGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCAGTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAA", 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"gene_synonym", - "GeneID:946076" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23894" - ], - [ - "gene_synonym", - "b1829" - ], - [ - "gene_synonym", - "JW1818" - ], - [ - "gene_synonym", - "NP_416343.1" - ], - [ - "gene_synonym", - "ECK1828" - ], - [ - "gene_synonym", - "GI:16129783" - ] - ], - "dna_sequence": "ATGATGCGAATCGCGCTCTTCCTGCTAACGAACCTGGCCGTAATGGTCGTTTTCGGGCTGGTACTGAGCCTGACAGGGATACAGTCGAGCAGCGTTCAGGGGCTGATGATCATGGCCTTGCTGTTCGGTTTTGGTGGTTCCTTCGTTTCGCTTCTGATGTCCAAATGGATGGCATTACGATCTGTTGGCGGGGAAGTGATCGAGCAACCGCGTAACGAAAGGGAACGTTGGCTGGTCAATACTGTAGCAACCCAGGCTCGTCAGGCGGGGATCGCTATGCCGCAAGTGGCTATCTACCATGCGCCGGACATCAACGCTTTTGCAACCGGTGCGCGCCGTGATGCCTCTCTGGTTGCTGTCAGCACCGGTTTGCTGCAGAACATGAGCCCGGATGAAGCCGAGGCGGTAATTGCTCACGAAATCAGCCACATCGCCAATGGTGATATGGTCACCATGACGCTGATTCAGGGCGTGGTGAACACCTTCGTTATCTTTATTTCCCGTATTCTGGCGCAGCTTGCCGCGGGTTTTATGGGCGGAAATCGTGATGAAGGTGAAGAGAGCAACGGCAACCCGCTGATCTACTTTGCGGTTGCAACGGTTCTGGAACTGGTGTTTGGTATTCTGGCGAGCATTATCACCATGTGGTTCTCGCGTCATCGTGAATTCCATGCTGATGCCGGTTCGGCAAAACTGGTTGGTCGCGAGAAAATGATTGCCGCGCTGCAGCGCCTGAAAACCAGCTATGAACCGCAAGAAGCAACCAGCATGATGGCTCTCTGCATTAACGGTAAGTCGAAATCGCTCAGTGAGTTGTTCATGACCCACCCGCCGCTGGATAAACGAATTGAAGCTCTGCGTACGGGTGAATACCTGAAGTAA", - "dna_sequence_length": 882, - "functions": [ - "putative endopeptidase" - ], - "id": "CDS_1821", - "location": [ 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"gene_synonym", - "GeneID:946096" - ] - ], - "dna_sequence": "ATGAACATGTTTTTTAGGCTTACCGCGTTAGCTGGCCTGCTTGCAATAGCAGGCCAGACCTTCGCTGTAGAAGATATCACGCGTGCTGATCAAATTCCGGTATTAAAGGAAGAGACGCAGCATGCGACGGTAAGTGAGCGCGTAACGTCGCGCTTCACCCGTTCTCATTATCGCCAGTTCGACCTCGATCAGGCATTTTCGGCCAAAATCTTTGACCGCTACCTGAATCTGCTCGATTACAGCCACAACGTGCTGCTGGCAAGCGATGTTGAACAGTTCGCGAAAAAGAAAACCGAGTTAGGCGATGAACTGCGTTCAGGCAAACTCGACGTTTTCTACGATCTCTACAATCTGGCGCAAAAGCGCCGTTTTGAGCGTTACCAGTACGCTTTGTCGGTACTGGAAAAGCCGATGGATTTCACCGGCAACGACACTTATAACCTTGACCGCAGCAAAGCGCCCTGGCCGAAAAACGAGGCTGAGTTGAACGCGCTGTGGGACAGTAAAGTCAAATTCGACGAGTTAAGCCTGAAGCTGACAGGAAAAACGGATAAAGAAATTCGTGAAACCCTGACTCGCCGCTACAAATTTGCCATTCGTCGTCTGGCGCAAACCAACAGCGAAGATGTTTTCTCGCTGGCAATGACGGCGTTTGCGCGTGAAATCGACCCGCATACCAACTATCTTTCCCCGCGTAATACCGAACAGTTCAACACTGAAATGAGTTTGTCGCTGGAAGGTATTGGCGCAGTGCTGCAAATGGATGATGACTACACCGTTATCAATTCGATGGTGGCAGGTGGTCCGGCAGCGAAGAGTAAAGCTATCAGCGTTGGTGACAAAATTGTCGGTGTTGGTCAAACAGGCAAGCCGATGGTTGACGTGATTGGCTGGCGTCTTGATGATGTGGTTGCCTTAATTAAAGGGCCGAAGGGCAGTAAAGTTCGTCTGGAAATTTTACCTGCTGGTAAAGGGACCAAGACCCGTACTGTAACGTTGACCCGTGAACGTATTCGTCTCGAAGACCGCGCGGTTAAAATGTCGGTGAAGACCGTCGGTAAAGAGAAAGTCGGCGTGCTGGATATTCCGGGCTTCTATGTGGGTTTGACAGACGATGTCAAAGTGCAACTGCAGAAACTGGAAAAACAGAATGTCAGCAGCGTCATCATCGACCTGCGTAGCAATGGCGGTGGGGCGTTAACTGAAGCCGTATCGCTCTCCGGTCTGTTTATTCCTGCGGGTCCCATTGTTCAGGTCCGCGATAACAACGGCAAGGTTCGTGAAGATAGCGATACCGACGGACAGGTTTTCTATAAAGGCCCGCTGGTGGTGCTGGTTGACCGCTTCAGTGCTTCGGCTTCAGAAATCTTTGCCGCGGCAATGCAGGATTACGGTCGTGCGCTGGTTGTGGGTGAACCGACGTTTGGTAAAGGCACCGTTCAGCAATACCGTTCATTGAACCGTATTTACGATCAGATGTTACGTCCTGAATGGCCAGCGCTGGGTTCTGTGCAGTACACGATCCAGAAATTCTATCGCGTTAACGGCGGCAGTACGCAACGTAAAGGCGTAACGCCAGACATCATCATGCCGACGGGTAATGAAGAAACGGAAACGGGTGAGAAATTCGAAGATAACGCGCTGCCGTGGGATAGCATTGATGCCGCGACTTATGTGAAATCAGGAGATTTAACGGCCTTTGAACCGGAGCTGCTGAAGGAACATAATGCGCGTATCGCGAAAGATCCTGAGTTCCAGAACATCATGAAGGATATCGCGCGCTTCAACGCTATGAAGGACAAGCGCAATATCGTTTCTCTGAATTACGCTGTGCGTGAGAAAGAGAATAATGAAGATGATGCGACGCGTCTGGCGCGTTTGAACGAACGCTTTAAACGCGAAGGTAAACCGGAGTTGAAGAAACTGGATGATCTACCGAAAGATTACCAGGAGCCGGATCCTTATCTGGATGAGACGGTGAATATCGCACTCGATCTGGCGAAGCTTGAAAAAGCCAGACCCGCGGAACAACCCGCTCCCGTCAAGTAA", 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"MNMFFRLTALAGLLAIAGQTFAVEDITRADQIPVLKEETQHATVSERVTSRFTRSHYRQFDLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTELGDELRSGKLDVFYDLYNLAQKRRFERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEAELNALWDSKVKFDELSLKLTGKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAFAREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLTRERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDLRSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNALPWDSIDAATYVKSGDLTAFEPELLKEHNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNEDDATRLARLNERFKREGKPELKKLDDLPKDYQEPDPYLDETVNIALDLAKLEKARPAEQPAPVK", - "protein_translation_length": 682, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948950" - ], - [ - "gene_synonym", - "ASAP:ABE-0006092" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45577" - ], - [ - "gene_synonym", - "JW5300" - ], - [ - "gene_synonym", - "EcoGene:EG12866" - ], - [ - "gene_synonym", - "yobE" - ], - [ - "gene_synonym", - "GI:49176156" - ], - [ - "gene_synonym", - "proQ" - ], - [ - "gene_synonym", - "YP_026161.1" - ], - [ - "gene_synonym", - "ECK1830" - ], - [ - "gene_synonym", - "yebJ" - ], - [ - "gene_synonym", - "b1831" - ], - [ - "gene_synonym", - "yoeC" - ] - ], - "dna_sequence": "ATGGAAAATCAACCTAAGTTGAATAGCAGTAAAGAAGTAATCGCGTTTCTGGCCGAACGTTTTCCCCACTGTTTCAGTGCGGAAGGTGAAGCGCGTCCGCTGAAAATCGGTATTTTTCAGGATTTGGTCGATCGTGTTGCTGGGGAAATGAACCTGAGCAAAACGCAATTGCGATCCGCTTTACGTCTCTACACTTCGAGCTGGCGTTATCTTTACGGTGTTAAACCCGGCGCAACGCGTGTCGATCTTGACGGCAACCCATGCGGTGAGCTGGACGAGCAACATGTAGAGCATGCTCGCAAGCAGCTTGAAGAAGCGAAAGCGCGTGTTCAGGCACAGCGTGCTGAACAGCAAGCGAAAAAACGCGAAGCTGCCGCAACTGCTGGTGAGAAAGAAGACGCACCGCGCCGCGAACGCAAGCCACGTCCGACTACGCCACGCCGCAAAGAAGGCGCTGAACGTAAACCTCGTGCGCAAAAGCCGGTAGAGAAAGCGCCAAAAACAGTAAAAGCACCTCGCGAAGAACAGCACACCCCGGTTTCTGACATTTCAGCTCTGACTGTCGGACAAGCCCTGAAGGTGAAAGCGGGTCAAAACGCGATGGATGCCACCGTATTAGAAATCACCAAAGACGGCGTCCGCGTCCAGCTGAATTCGGGTATGTCTTTGATTGTGCGCGCAGAACACCTGGTGTTCTGA", - "dna_sequence_length": 699, - "functions": [ - "RNA chaperone, putative ProP translation regulator" - ], - "id": "CDS_1823", - "location": [ - [ - "NC_000913", - 1915534, - "-", - 699 - ] - ], - "md5": "3d840c14343b3e896901f2fae51edbf0", - "parent_gene": "", - "protein_md5": "c36e50bc6de35773fd97b65e8aeeab07", - "protein_translation": "MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVDRVAGEMNLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHARKQLEEAKARVQAQRAEQQAKKREAAATAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQKPVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLNSGMSLIVRAEHLVF", - "protein_translation_length": 232, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:171701682" - ], - [ - "gene_synonym", - "NP_416346.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76270" - ], - [ - "gene_synonym", - "ASAP:ABE-0006095" - ], - [ - "gene_synonym", - "msrC" - ], - [ - "gene_synonym", - "yebR" - ], - [ - "gene_synonym", - "ECK1831" - ], - [ - "gene_synonym", - "JW1821" - ], - [ - "gene_synonym", - "b1832" - ], - [ - "gene_synonym", - "GeneID:946086" - ], - [ - "gene_synonym", - "EcoGene:EG14020" - ] - ], - "dna_sequence": "ATGAACAAAACAGAATTTTACGCGGATTTAAATCGCGACTTTAACGCGCTGATGGCGGGAGAAACCAGTTTTCTGGCAACGCTTGCGAACACCAGTGCGTTGTTATATGAGCGTCTCACTGACATAAACTGGGCAGGTTTTTATTTGCTTGAGGACGATACACTGGTACTCGGACCATTTCAGGGCAAAATTGCCTGTGTCCGGATACCCGTCGGGCGCGGCGTGTGCGGCACTGCGGTTGCCCGCAATCAAGTGCAGCGTATCGAGGATGTTCATGTGTTTGACGGGCATATTGCCTGTGATGCGGCGAGTAATTCTGAAATTGTTCTGCCGCTGGTGGTGAAAAATCAGATTATTGGTGTTCTCGACATCGATAGTACCGTCTTCGGTCGCTTTACAGACGAGGACGAGCAAGGCTTACGTCAGCTTGTGGCACAGCTTGAAAAAGTGCTTGCAACGACGGATTACAAAAAATTCTTTGCGAGCGTCGCAGGATAA", - "dna_sequence_length": 498, - "functions": [ - "free methionine-(R)-sulfoxide reductase" - ], - "id": "CDS_1824", - "location": [ - [ - "NC_000913", - 1916128, - "-", - 498 - ] - ], - "md5": "27cf720ea15ceb8aad0bf6d407a767f3", - "parent_gene": "", - "protein_md5": "6941d282316ecc44555eb014ec962992", - "protein_translation": "MNKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDINWAGFYLLEDDTLVLGPFQGKIACVRIPVGRGVCGTAVARNQVQRIEDVHVFDGHIACDAASNSEIVLPLVVKNQIIGVLDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKKFFASVAG", - "protein_translation_length": 165, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006098" - ], - [ - "gene_synonym", - "NP_416347.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD03" - ], - [ - "gene_synonym", - "yebS" - ], - [ - "gene_synonym", - "ECK1832" - ], - [ - "gene_synonym", - "JW1822" - ], - [ - "gene_synonym", - "GeneID:946353" - ], - [ - "gene_synonym", - "b1833" - ], - [ - "gene_synonym", - "GI:16129786" - ], - [ - "gene_synonym", - "EcoGene:EG14021" - ] - ], - "dna_sequence": "ATGGCTCTTAACACACCACAAATTACGCCGACAAAAAAGATAACAGTGAGGGCAATCGGCGAGGAACTGCCGCGTGGTGATTACCAACGTTGCCCGCAATGTGACATGCTGTTTAGCCTGCCCGAGATAAATTCTCATCAAAGTGCCTATTGTCCGCGCTGTCAGGCAAAAATTCGTGACGGGCGCGACTGGTCGCTAACGCGCCTGGCGGCAATGGCCTTCACCATGCTGTTGCTTATGCCGTTTGCCTGGGGCGAACCGCTGTTGCATATCTGGCTGTTAGGCATTCGTATTGACGCCAACGTTATGCAAGGCATCTGGCAAATGACCAAACAGGGCGATGCGATAACGGGGTCGATGGTCTTTTTCTGCGTTATTGGTGCCCCGCTCATTCTGGTGACCTCCATAGCTTATTTATGGTTTGGTAACCGACTGGGAATGAATTTACGTCCGGTACTGCTGATGCTTGAGCGACTTAAAGAGTGGGTAATGCTCGATATCTACCTGGTCGGCATTGGCGTTGCTTCTATAAAGGTACAGGATTATGCCCATATCCAGGCTGGTGTCGGCTTGTTCTCTTTTGTGGCGTTGGTGATTTTAACGACGGTGACGTTGTCACATCTTAATGTCGAAGAACTGTGGGAGCGATTTTATCCGCAGCGCCCCGCTACGCGTAGGGACGAGAAACTTCGTGTCTGTCTTGGGTGCCATTTTACCGGCTATCCAGATCAGCGTGGTCGCTGCCCGCGTTGCCATATCCCGCTACGCCTGCGTCGCCGTCATAGTCTGCAAAAATGCTGGGCGGCGCTGTTAGCGTCAATCGTTTTATTGTTACCTGCCAACCTGTTGCCTATTTCTATCATTTATCTGAACGGAGGACGGCAGGAAGATACAATTCTTTCCGGAATTATGTCGCTGGCAAGTAGCAACATTGCGGTTGCAGGAATCGTGTTTATCGCCAGTATTCTGGTACCGTTTACTAAAGTGATCGTCATGTTCACTTTACTGTTGAGCATTCATTTTAAATGCCAGCAAGGTTTACGCACACGCATTCTGTTACTGCGGATGGTGACCTGGATTGGTCGCTGGTCGATGCTCGACCTGTTTGTCATATCTTTAACCATGTCGCTGATTAATCGCGATCAGATCCTCGCTTTTACTATGGGACCGGCTGCGTTTTATTTCGGCGCAGCGGTAATTTTGACTATTCTTGCTGTGGAATGGCTGGACAGCCGCTTACTTTGGGATGCACATGAGTCAGGAAACGCCCGCTTCGACGACTGA", - "dna_sequence_length": 1284, - "functions": [ - "inner membrane PqiA domain protein" - ], - "id": "CDS_1825", - "location": [ - [ - "NC_000913", - 1916258, - "+", - 1284 - ] - ], - "md5": "d9178fb6b92e920354e3167cb7cda68a", - "parent_gene": "", - "protein_md5": "135f12e1025f0da4ffc984ffdf369c78", - "protein_translation": "MALNTPQITPTKKITVRAIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLKEWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD", - "protein_translation_length": 427, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006101" - ], - [ - "gene_synonym", - "yebT" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76272" - ], - [ - "gene_synonym", - "NP_416348.2" - ], - [ - "gene_synonym", - "ECK1833" - ], - [ - "gene_synonym", - "GeneID:946352" - ], - [ - "gene_synonym", - "JW1823" - ], - [ - "gene_synonym", - "GI:90111340" - ], - [ - "gene_synonym", - "EcoGene:EG14022" - ], - [ - "gene_synonym", - "b1834" - ] - ], - "dna_sequence": "ATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCCGTTCATCGCGCTAATGATTGCCAGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACCGTCACCATCGACTTTATGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTCGGAACAGTGCAGGATATCAGCCTCAGCGACGATCTTCGTAAGATTGAAGTCAAGGTCAGCATCAAGTCCGATATGAAAGATGCGCTGCGCGAAGAGACTCAGTTCTGGCTGGTGACGCCAAAAGCATCGTTGGCAGGTGTCTCCGGGCTGGACGCCCTCGTCGGTGGGAACTATATCGGCATGATGCCGGGTAAAGGTAAAGAGCAGGATCACTTTGTCGCACTCGATACCCAACCGAAATATCGGCTGGACAATGGCGATCTGATGATCCACCTGCAAGCCCCCGATCTCGGTTCGCTGAACAGCGGTTCATTGGTCTATTTCCGCAAGATCCCGGTGGGAAAAGTCTACGACTATGCCATCAATCCCAACAAGCAAGGCGTGGTGATTGATGTCCTGATCGAGCGGCGTTTTACCGATCTGGTGAAAAAAGGTAGCCGTTTCTGGAACGTTTCCGGCGTTGATGCCAACGTCAGTATCAGTGGCGCGAAGGTGAAACTGGAAAGCCTGGCGGCACTGGTTAACGGTGCGATTGCCTTCGATTCACCAGAAGAGTCGAAACCTGCCGAGGCGGAAGATACCTTTGGTCTGTATGAAGATCTGGCCCACAGCCAGCGTGGCGTAATAATAAAACTGGAACTGCCGAGTGGGGCCGGATTAACCGCCGACTCGACGCCGTTAATGTATCAGGGGCTGGAAGTCGGACAGCTGACTAAACTGGATTTAAATCCTGGTGGTAAAGTCACAGGGGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAAATTATCCCTTAGCGATGCTAATCTCAGCGCCCTGCTGACCGGCAAAACCTTCGAGCTGGTGCCCGGCGATGGCGAGCCACGCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGCGTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGCTGGAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAACGCGTTTGATATCGATCTGCATATTAAGCCGGAGTATCGCAACCTTCTGACCAGCAATAGCGTGTTCTGGGCAGAAGGCGGGGCGAAAGTTCAGCTGAATGGTAGTGGTCTGACCGTACAGGCATCCCCGCTCTCCAGAGCATTAAAGGGAGCCATTAGCTTCGACAACCTCAGCGGTGCCAGCGCCAGTCAGCGTAAAGGCGATAAGCGTATTCTGTATGCTTCCGAAACAGCGGCCCGTGCGGTTGGCGGGCAGATTACGCTTCACGCTTTCGATGCCGGAAAACTGGCGGTCGGGATGCCAATTCGCTATCTCGGTATTGATATCGGGCAAATCCAGACGCTGGATCTGATTACCGCACGCAATGAAGTACAGGCAAAGGCGGTACTTTACCCGGAATATGTCCAGACCTTTGCTCGCGGTGGTACGCGCTTCTCAGTGGTCACACCGCAAATTTCGGCAGCTGGCGTTGAGCATCTTGATACTATCCTCCAGCCGTATATCAACGTCGAACCAGGCCGGGGCAATCCTCGCCGCGACTTTGAATTACAAGAGGCCACCATTACTGATTCGCGTTACCTGGATGGCTTAAGCATTATTGTTGAAGCGCCGGAAGCCGGTTCGTTAGGCATCGGTACGCCTGTGCTGTTCCGTGGTCTGGAAGTCGGTACGGTTACAGGAATGACGCTGGGGACATTGTCAGATCGCGTGATGATTGCGATGCGCATCAGTAAACGCTATCAACACCTGGTGCGTAACAATTCCGTCTTCTGGTTGGCATCGGGTTACAGTCTGGACTTTGGTCTGACGGGCGGCGTAGTGAAAACCGGCACCTTTAACCAGTTTATCCGTGGCGGCATCGCCTTCGCCACGCCTCCGGGTACGCCACTGGCACCGAAAGCCCAGGAAGGCAAACACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACTGCGCTTCCCAAATAA", - "dna_sequence_length": 2634, - "functions": [ - "MCE domain protein" - ], - "id": "CDS_1826", - "location": [ - [ - "NC_000913", - 1917510, - "+", - 2634 - ] - ], - "md5": "b8ba16873fb1d16b6e19bdafe9b43b3b", - "parent_gene": "", - "protein_md5": "8b5afe2672458ebf39e6cf1a6703b5e8", - "protein_translation": "MSQETPASTTEAQIKNKRRISPFWLLPFIALMIASWLIWDSYQDRGNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGDLMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKVKLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDVLTLTLTAPESYGIDAGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWINGGIRILPGDKGEMKASYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIKPEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILYASETAARAVGGQITLHAFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPYINVEPGRGNPRRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK", - "protein_translation_length": 877, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006106" - ], - [ - "gene_synonym", - "NP_416349.2" - ], - [ - "gene_synonym", - "rsmF" - ], - [ - "gene_synonym", - "JW5301" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76273" - ], - [ - "gene_synonym", - "yebU" - ], - [ - "gene_synonym", - "GeneID:946348" - ], - [ - "gene_synonym", - "ECK1834" - ], - [ - "gene_synonym", - "GI:90111341" - ], - [ - "gene_synonym", - "b1835" - ], - [ - "gene_synonym", - "EcoGene:EG14023" - ] - ], - "dna_sequence": "GTGGCCCAACACACCGTTTATTTCCCGGACGCCTTTCTGACACAAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCCGCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGATGCCATTTTGCTGGACGCTCCCTGCTCTGGCGAAGGCGTGGTGCGTAAAGATCCCGATGCGCTAAAAAACTGGTCACCAGAAAGCAATCAGGAAATCGCAGCTACACAACGGGAGCTTATCGACAGCGCCTTTCATGCATTACGTCCTGGTGGTACGCTGGTTTACTCGACCTGTACCTTAAACCAGGAAGAAAACGAAGCCGTTTGCCTGTGGCTGAAAGAGACTTACCCCGACGCAGTAGAGTTTTTACCACTTGGCGATCTCTTCCCTGGTGCAAACAAAGCGCTGACCGAAGAAGGCTTTTTGCATGTTTTCCCACAAATTTACGACTGCGAAGGCTTCTTCGTTGCTCGTCTGCGTAAAACTCAGGCGATTCCCGCCTTACCCGCCCCCAAATACAAAGTCGGTAATTTTCCGTTCAGCCCGGTGAAAGATCGCGAAGCTGGACAAATTCGTCAGGCGGCTACAGGTGTTGGCTTAAACTGGGATGAAAACCTGCGCCTCTGGCAGCGTGACAAAGAACTGTGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGA", 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"gene_synonym", - "yebV" - ], - [ - "gene_synonym", - "GeneID:946347" - ], - [ - "gene_synonym", - "ECK1835" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64503" - ], - [ - "gene_synonym", - "GI:90111342" - ], - [ - "gene_synonym", - "NP_416350.4" - ], - [ - "gene_synonym", - "EcoGene:EG14024" - ], - [ - "gene_synonym", - "b1836" - ] - ], - "dna_sequence": "ATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGA", - "dna_sequence_length": 237, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1828", - "location": [ - [ - "NC_000913", - 1921780, - "+", - 237 - ] - ], - "md5": "8c0b606d8accc1dcbc43864c6b1a5660", - "parent_gene": "", - "protein_md5": "5bff90af6815e1bc33556196ce21148c", - "protein_translation": "MKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAWDAETSIPALLNGEHSVLYRTRYDQQSDAWIMRLA", 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"4036eba6ea3efdae5df69e700ae474f2", - "protein_translation": "MFALVLFVCYLDGGCEDIVVDVYNTEQQCLYSMSDQRIRQGGCFPIEDFIDGFWRPAQEYGDF", - "protein_translation_length": 63, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006114" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P55798" - ], - [ - "gene_synonym", - "yebX" - ], - [ - "gene_synonym", - "JW1827" - ], - [ - "gene_synonym", - "prpA" - ], - [ - "gene_synonym", - "NP_416352.4" - ], - [ - "gene_synonym", - "GeneID:946356" - ], - [ - "gene_synonym", - "b1838" - ], - [ - "gene_synonym", - "ECK1837" - ], - [ - "gene_synonym", - "EcoGene:EG14026" - ], - [ - "gene_synonym", - "GI:90111344" - ], - [ - "gene_synonym", - "pphA" - ] - ], - "dna_sequence": "ATGAAACAGCCTGCGCCCGTTTATCAGAGAATTGCGGGTCATCAATGGCGACATATCTGGCTTTCTGGCGATATACACGGTTGTCTTGAGCAGTTGCGCCGCAAATTATGGCATTGTCGTTTTGATCCGTGGCGAGATTTACTTATCTCAGTGGGAGACGTTATCGATCGTGGGCCGCAAAGTTTACGTTGTCTGCAGTTACTGGAACAACATTGGGTTTGTGCGGTAAGAGGCAATCATGAACAGATGGCGATGGATGCGCTGGCATCCCAGCAGATGTCTTTGTGGTTGATGAATGGCGGCGACTGGTTTATTGCGCTGGCAGATAATCAACAGAAACAAGCGAAAACGGCGCTGGAAAAATGTCAGCATTTGCCCTTTATTCTTGAAGTACACAGTCGCACCGGCAAGCATGTTATTGCTCATGCCGATTATCCAGATGATGTTTATGAATGGCAAAAGGACGTTGATTTGCATCAGGTCTTGTGGAGCCGCTCGCGATTAGGTGAACGCCAAAAAGGGCAGGGAATTACAGGTGCTGATCATTTCTGGTTTGGTCATACACCGTTGCGACATCGCGTGGATATTGGCAACCTGCATTATATTGATACCGGTGCTGTCTTTGGGGGCGAACTGACTCTTGTGCAATTGCAATAA", - "dna_sequence_length": 657, - "functions": [ - "serine/threonine-specific protein phosphatase 1" - ], - "id": "CDS_1830", - "location": [ - [ - "NC_000913", - 1922969, - "-", - 657 - ] - ], - "md5": "fdfbec765017074658d642778b1a8baa", - "parent_gene": "", - "protein_md5": "4acf18368e9203a4c0f68a87f75524db", - "protein_translation": "MKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPWRDLLISVGDVIDRGPQSLRCLQLLEQHWVCAVRGNHEQMAMDALASQQMSLWLMNGGDWFIALADNQQKQAKTALEKCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLHQVLWSRSRLGERQKGQGITGADHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ", - "protein_translation_length": 218, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129792" - ], - [ - "gene_synonym", - "yebY" - ], - [ - "gene_synonym", - "ECK1840" - ], - [ - "gene_synonym", - "NP_416353.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006118" - ], - [ - "gene_synonym", - "GeneID:947014" - ], - [ - "gene_synonym", - "b1839" - ], - [ - "gene_synonym", - "EcoGene:EG14027" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64506" - ], - [ - "gene_synonym", - "JW1828" - ] - ], - "dna_sequence": "ATGATGAAAAAAAGTATTCTGGCGTTTCTGTTACTCACCAGTTCTGCAGCGGCGCTGGCTGCACCGCAGGTGATTACCGTCAGTCGTTTTGAAGTGGGTAAAGACAAATGGGCGTTTAATCGCGAAGAGGTGATGCTGACTTGCCGACCGGGTAATGCTTTGTATGTTATTAATCCGAGTACCCTCGTGCAGTATCCTTTAAACGATATCGCACAAAAGGAAGTTGCCAGTGGGAAGACCAATGCCCAACCCATTTCGGTGATTCAGATTGATGATCCTAACAATCCCGGCGAAAAAATGAGTCTGGCACCGTTTATAGAACGAGCTGAAAAACTCTGTTAA", - "dna_sequence_length": 342, - "functions": [ - "DUF2511 family protein" - ], - "id": "CDS_1831", - "location": [ - [ - "NC_000913", - 1923706, - "-", - 342 - ] - ], - "md5": "6af33258df26daf02eab3df95a707ecb", - "parent_gene": "", - "protein_md5": "0cea6dce3ee844fdfbaa3dfde75abf19", - "protein_translation": "MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKTNAQPISVIQIDDPNNPGEKMSLAPFIERAEKLC", - "protein_translation_length": 113, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76278" - ], - [ - "gene_synonym", - "GeneID:947078" - ], - [ - "gene_synonym", - "yebZ" - ], - [ - "gene_synonym", - "ECK1841" - ], - [ - "gene_synonym", - "ASAP:ABE-0006120" - ], - [ - "gene_synonym", - "GI:16129793" - ], - [ - "gene_synonym", - "NP_416354.1" - ], - [ - "gene_synonym", - "EcoGene:EG14028" - ], - [ - "gene_synonym", - "b1840" - ], - [ - "gene_synonym", - "JW1829" - ] - ], - "dna_sequence": "ATGCTGGCGTTTACCTGGATCGCGCTGCGATTTATCCATTTCACCTCGCTGATGCTGGTTTTTGGCTTCGCAATGTACGGTGCCTGGCTGGCCCCCTTGACGATTCGTCGCTTGCTGGCGAAGCGTTTTCTGCGTTTACAACAGCACGCTGCCGTCTGGAGTTTGATCAGTGCCACTGCAATGCTCGCCGTTCAGGGCGGGTTGATGGGAACGGGATGGACAGATGTATTTTCGCCAAACATTTGGCAGGCTGTTTTGCAAACGCAGTTTGGTGGCATCTGGTTATGGCAAATTGTTCTCGCCCTCGTAACGTTGATCGTCGCCCTTATGCAACCGCGGAATATGCCACGTTTGCTGTTTATGCTCACTACCGCGCAATTTATTCTGCTGGCGGGAGTGGGGCATGCGACGCTGAATGAAGGGGTAACAGCGAAAATCCATCAGACTAATCACGCGATTCACCTGATTTGTGCGGCGGCGTGGTTTGGGGGATTACTGCCGGTGCTCTGGTGTATGCAACTCATCAAAGGCCGTTGGCGACACCAGGCTATTCAGGCGCTGATGCGTTTTTCCTGGTGCGGGCATTTTGCGGTGATCGGCGTACTGGCAAGCGGCGTGCTTAATGCATTGTTGATTACCGGATTTCCCCCCACGCTTACGACTTACTGGGGCCAACTCTTATTGCTCAAAGCCATCCTGGTGATGATTATGGTGGTCATTGCGCTGGCTAATCGTTATGTTCTTGTACCGCGCATGAGGCAGGATGAAGATCGTGCGGCACCCTGGTTTGTGTGGATGACTAAACTCGAATGGGCGATAGGTGCGGTAGTGCTGGTGATCATCAGCCTGCTTGCGACTCTCGAACCTTTTTGA", - "dna_sequence_length": 873, - "functions": [ - "inner membrane protein" - ], - "id": "CDS_1832", - "location": [ - [ - "NC_000913", - 1924591, - "-", - 873 - ] - ], - "md5": "e2845007ca71fb5b8fd7bc085baa5666", - "parent_gene": "", - "protein_md5": "16f14a027c89bc68b3dda2377a4027d3", - "protein_translation": "MLAFTWIALRFIHFTSLMLVFGFAMYGAWLAPLTIRRLLAKRFLRLQQHAAVWSLISATAMLAVQGGLMGTGWTDVFSPNIWQAVLQTQFGGIWLWQIVLALVTLIVALMQPRNMPRLLFMLTTAQFILLAGVGHATLNEGVTAKIHQTNHAIHLICAAAWFGGLLPVLWCMQLIKGRWRHQAIQALMRFSWCGHFAVIGVLASGVLNALLITGFPPTLTTYWGQLLLLKAILVMIMVVIALANRYVLVPRMRQDEDRAAPWFVWMTKLEWAIGAVVLVIISLLATLEPF", - "protein_translation_length": 290, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1842" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA57" - ], - [ - "gene_synonym", - "ASAP:ABE-0006123" - ], - [ - "gene_synonym", - "yobA" - ], - [ - "gene_synonym", - "JW1830" - ], - [ - "gene_synonym", - "GI:16129794" - ], - [ - "gene_synonym", - "EcoGene:EG14029" - ], - [ - "gene_synonym", - "GeneID:948315" - ], - [ - "gene_synonym", - "b1841" - ], - [ - "gene_synonym", - "NP_416355.1" - ] - ], 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- [ - "gene_synonym", - "ECK1843" - ], - [ - "gene_synonym", - "ASAP:ABE-0006126" - ], - [ - "gene_synonym", - "JW1831" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABS8" - ], - [ - "gene_synonym", - "GI:16129795" - ], - [ - "gene_synonym", - "GeneID:947471" - ], - [ - "gene_synonym", - "holE" - ], - [ - "gene_synonym", - "b1842" - ] - ], - "dna_sequence": "ATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGAACGCTACAATATGCCGGTGATCGCTGAAGCGGTTGAACGTGAACAGCCTGAACATTTGCGCAGCTGGTTTCGCGAGCGGCTTATTGCCCACCGTTTGGCTTCGGTCAATCTGTCACGTTTACCTTACGAGCCCAAACTTAAATAA", - "dna_sequence_length": 231, - "functions": [ - "DNA polymerase III, theta subunit" - ], - "id": "CDS_1834", - "location": [ - [ - "NC_000913", - 1925108, - "+", - 231 - ] - ], - "md5": "2106f410f37f891e9742c2400ade0bbe", - "parent_gene": "", - "protein_md5": "3182c2e590e2a982200fbc51cfe0daa7", - "protein_translation": 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"ATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCTCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGAGTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTTCCATCGCTTTCTTTACTGGGGTGTGATTATTCGCGACGTGCCCTTCCTGCCCCACCCGATCTCTCACTGTTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATCATTGCCGGCCTTCCCGTTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGAAAAACGCCTGGGATCTACCATCAGAGTCATGGTGCATGTCTGGGCCGTCGTTCCAGAACCATCACGGTGGTCGATGAACAACCGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCGTTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAG", - "dna_sequence_length": 657, - "functions": [ - "C-N hydrolase family protein" - ], - "id": "CDS_1835", - "location": [ - [ - "NC_000913", - 1925440, - "+", - 657 - ] - ], - "md5": "5d1ffb339dd17c21bb1ca8301b306a63", - "parent_gene": "", - "protein_md5": "8551881d7a6c38932fa38acb68286fd2", - "protein_translation": "MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPSLSLLGCDYSRRALPAPPDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPWRKTPGIYHQSHGACLGRRSRTITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLASARRLQFFSHQYSIAVLMANARGNSALWDEYGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR", - "protein_translation_length": 218, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14031" - ], - [ - "gene_synonym", - "exoX" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEK0" - ], - [ - "gene_synonym", - "NP_416358.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006131" - ], - [ - "gene_synonym", - "ECK1845" - ], - [ - "gene_synonym", - "yobC" - ], - [ - "gene_synonym", - "GeneID:946361" - ], - [ - "gene_synonym", - "GI:16129797" - ], - [ - "gene_synonym", - "JW1833" - ], - [ - "gene_synonym", - "b1844" - ] - ], - "dna_sequence": "ATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGATTCATCGCATCACCGAAGCCATGGTCGCCGATAAACCGTGGATTGAAGATGTGATCCCACACTATTACGGTAGTGAATGGTATGTCGCGCATAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAG", - "dna_sequence_length": 663, - "functions": [ - "exodeoxyribonuclease 10", - "DNA exonuclease X" - ], - "id": "CDS_1836", - "location": [ - [ - "NC_000913", - 1926120, - "+", - 663 - ] - ], - "md5": "99b94526e4135c5ad1c0e7a32fe4b4e2", - "parent_gene": "", - "protein_md5": "31064f5e770b03f25ececcfcbfe7f608", - "protein_translation": "MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPISPQAMAIHRITEAMVADKPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKLARRLWPGIKYSNMALYKTRKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQMADITGRPSLMTTFTFGKYRGKAVSDVAERDPGYLRWLFNNLDSMSPELRLTLKHYLENT", - "protein_translation_length": 220, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1846" - ], - [ - "gene_synonym", - "tlp" - ], - [ - "gene_synonym", - "ASAP:ABE-0006133" - ], - [ - "gene_synonym", - "JW1834" - ], - [ - "gene_synonym", - "NP_416359.1" - ], - [ - "gene_synonym", - "EcoGene:EG11004" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24555" - ], - [ - "gene_synonym", - "b1845" - ], - [ - "gene_synonym", - "GI:16129798" - ], - [ - "gene_synonym", - "ptrB" - ], - [ - "gene_synonym", - "GeneID:946358" - ], - [ - "gene_synonym", - "opdB" - ] - ], - "dna_sequence": "ATGCTACCAAAAGCCGCCCGCATTCCCCACGCCATGACGCTTCATGGCGATACGCGCATCGATAATTACTACTGGCTGCGGGACGATACGCGTTCTCAGCCAGAAGTCCTGGACTACCTGCAACAAGAAAATAGTTACGGTCATCGGGTGATGGCCTCACAACAAGCCTTGCAGGATCGCATCTTAAAGGAAATCATCGACCGCATTCCGCAACGAGAAGTTTCTGCGCCCTACATCAAAAATGGCTACCGCTATCGGCATATTTATGAACCAGGCTGTGAATATGCTATCTACCAGCGTCAATCGGCATTCAGTGAAGAGTGGGATGAGTGGGAAACATTGCTCGATGCCAATAAGCGCGCAGCTCATAGTGAGTTTTATTCGATGGGCGGAATGGCGATTACGCCCGATAACACCATTATGGCGCTGGCAGAAGATTTTCTTTCCCGACGCCAGTACGGCATTCGTTTTCGTAATCTGGAAACTGGTAACTGGTACCCGGAACTGCTGGATAACGTTGAACCCAGCTTTGTCTGGGCAAATGACTCCTGGATTTTCTACTATGTTCGCAAGCATCCGGTGACGCTGCTGCCTTATCAGGTCTGGCGTCACGCCATCGGTACGCCAGCATCGCAAGATAAACTGATCTACGAAGAAAAAGACGATACCTATTACGTCAGCCTGCATAAAACGACCTCGAAGCACTATGTAGTCATTCATTTGGCCAGCGCCACCACCAGTGAAGTTCGCCTGCTGGACGCGGAAATGGCCGATGCCGAGCCGTTTGTTTTTCTGCCGCGCCGCAAAGATCACGAATACAGCCTTGATCACTACCAGCATCGTTTTTATCTGCGTTCCAACCGCCACGGCAAAAACTTTGGCTTATACCGTACCCGTATGCGTGATGAGCAACAGTGGGAAGAGTTAATTCCGCCACGCGAAAACATCATGCTGGAAGGGTTTACGCTGTTTACCGACTGGCTGGTGGTTGAAGAGCGTCAGCGCGGGTTAACCAGTTTGCGCCAAATTAACCGCAAGACCCGGGAAGTCATTGGTATTGCCTTTGATGATCCGGCCTATGTGACCTGGATTGCCTACAATCCAGAACCTGAAACCGCGCGATTGCGTTATGGTTATTCTTCCATGACTACACCAGACACTTTGTTTGAACTGGATATGGATACCGGTGAGCGTCGTGTATTAAAACAAACGGAAGTTCCTGGTTTTTATGCGGCGAATTACCGCAGTGAACACCTGTGGATAGTCGCCCGTGATGGCGTCGAAGTTCCGGTTTCGTTGGTCTACCATCGCAAACATTTTCGCAAAGGACACAACCCGTTGCTGGTGTATGGCTATGGTTCTTACGGCGCAAGTATTGATGCCGATTTCAGTTTTAGCCGCTTGAGTTTGTTAGATCGTGGCTTTGTCTACGCCATTGTCCATGTTCGCGGCGGTGGTGAGCTGGGGCAACAATGGTACGAAGACGGAAAATTTCTGAAGAAGAAAAATACGTTTAATGATTATCTTGATGCCTGCGATGCATTGTTAAAACTGGGCTATGGCTCTCCTTCGCTTTGTTATGCGATGGGCGGGAGTGCGGGGGGCATGTTGATGGGCGTTGCAATTAATCAACGCCCGGAATTATTCCACGGCGTTATCGCCCAGGTACCGTTTGTTGATGTTGTAACAACGATGCTTGATGAATCAATTCCTCTTACCACTGGTGAGTTTGAAGAGTGGGGTAACCCGCAGGATCCGCAATATTACGAGTACATGAAAAGCTACAGCCCGTATGACAACGTCACCGCACAGGCTTATCCGCATTTACTGGTAACGACCGGTTTGCACGATTCTCAGGTGCAATATTGGGAACCGGCAAAATGGGTCGCTAAATTGCGCGAGCTGAAAACCGATGACCATCTTTTATTGCTCTGTACCGACATGGACTCAGGCCATGGCGGTAAATCTGGTCGCTTTAAATCGTACGAAGGCGTAGCGATGGAATATGCTTTTCTGGTCGCGCTGGCGCAGGGAACATTACCCGCTACGCCTGCGGACTAA", 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"protein_translation_length": 686, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1847" - ], - [ - "gene_synonym", - "ASAP:ABE-0006137" - ], - [ - "gene_synonym", - "EcoGene:EG11806" - ], - [ - "gene_synonym", - "JW1835" - ], - [ - "gene_synonym", - "GeneID:946355" - ], - [ - "gene_synonym", - "yebE" - ], - [ - "gene_synonym", - "b1846" - ], - [ - "gene_synonym", - "GI:16129799" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33218" - ], - [ - "gene_synonym", - "NP_416360.1" - ] - ], - "dna_sequence": "ATGGCTAACTGGTTAAATCAACTGCAATCCCTGCTTGGGCAAAGCAGTTCTTCTACCTCCTCGTCTGCGGATCAGGGATTGGTCAAACTGTTAGTGCCAGGCGCATTAGGCGGACTGGCTGGGCTGCTGGTCGCAAATAAATCAGCACGTAAACTTCTTACGAAATATGGCACCAACGCGTTACTGGTTGGCGGCGGAGCGGTAGCGGGTACGGTGCTGTGGAATAAATACAAAGATAAAATTCGCGCGGCGCATCAGGACGAACCGCAGTTTGGCGCGCAAAGTACGCCGCTGGATGAGCGTACAGCACGTTTGATCCTTGCGCTGGTCTTTGCCGCTAAAAGTGATGGTCATATTGATGCCAAAGAACGTGCGGCAATCGACCAGCAATTGCGTGGAGCCGGCGTGGAAGAGCAGGGGCGTGTACTCATTGAGCAGGCAATCGAACAACCGCTGGATCCACAACGCCTGGCTACCGGGGTCCGCAATGAAGAAGAGGCGCTGGAAATCTATTTCCTGAGTTGCGCGGCTATTGATATTGACCATTTTATGGAACGCAGTTACCTGAATGCACTGGGTGACGCGCTGAAAATCCCCCAGGATGTTCGTGACGGCATTGAACGCGATCTCGAACAGCAAAAACGCACTTTGGCGGAATAA", - "dna_sequence_length": 660, - "functions": [ - "DUF533 family inner membrane protein" - ], - "id": "CDS_1838", - "location": [ - [ - "NC_000913", - 1929707, - "-", - 660 - ] - ], - "md5": "453eb3ed7dbbd9b8146a8ccea22406ac", - "parent_gene": "", - "protein_md5": "e8d0005da3a3e49a9db4d3d95377b718", - "protein_translation": "MANWLNQLQSLLGQSSSSTSSSADQGLVKLLVPGALGGLAGLLVANKSARKLLTKYGTNALLVGGGAVAGTVLWNKYKDKIRAAHQDEPQFGAQSTPLDERTARLILALVFAAKSDGHIDAKERAAIDQQLRGAGVEEQGRVLIEQAIEQPLDPQRLATGVRNEEEALEIYFLSCAAIDIDHFMERSYLNALGDALKIPQDVRDGIERDLEQQKRTLAE", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33219" - ], - [ - "gene_synonym", - "ECK1848" - ], - [ - "gene_synonym", - "GeneID:946363" - ], - [ - "gene_synonym", - "NP_416361.2" - ], - [ - "gene_synonym", - "JW1836" - ], - [ - "gene_synonym", - "yebF" - ], - [ - "gene_synonym", - "b1847" - ], - [ - "gene_synonym", - "EcoGene:EG11807" - ], - [ - "gene_synonym", - "ASAP:ABE-0006141" - ], - [ - "gene_synonym", - "GI:145698278" - ] - ], - "dna_sequence": "ATGAAAAAAAGAGGGGCGTTTTTAGGGCTGTTGTTGGTTTCTGCCTGCGCATCAGTTTTCGCTGCCAATAATGAAACCAGCAAGTCGGTCACTTTCCCAAAGTGTGAAGATCTGGATGCTGCCGGAATTGCCGCGAGCGTAAAACGTGATTATCAACAAAATCGCGTGGCGCGTTGGGCAGATGATCAAAAAATTGTCGGTCAGGCCGATCCCGTGGCTTGGGTCAGTTTGCAGGACATTCAGGGTAAAGATGATAAATGGTCAGTACCGCTAACCGTGCGTGGTAAAAGTGCCGATATTCATTACCAGGTCAGCGTGGACTGCAAAGCGGGAATGGCGGAATATCAGCGGCGTTAA", - "dna_sequence_length": 357, - "functions": [ - "extracellular Colicin M immunity family protein" - ], - "id": "CDS_1839", - "location": [ - [ - "NC_000913", - 1930390, - "-", - 357 - ] - ], - "md5": "7e4cb96e405376ff14223b58dcac1990", - "parent_gene": "", - "protein_md5": "125423209b555c7db962f98b02d41e04", - "protein_translation": "MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEDLDAAGIAASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHYQVSVDCKAGMAEYQRR", - "protein_translation_length": 118, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11808" - ], - [ - "gene_synonym", - "GeneID:946364" - ], - [ - "gene_synonym", - "NP_416362.1" - ], - [ - "gene_synonym", - "ECK1849" - ], - [ - "gene_synonym", - "JW1837" - ], - [ - "gene_synonym", - "GI:16129801" - ], - [ - "gene_synonym", - "b1848" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACY9" - ], - [ - "gene_synonym", - "yebG" - ], - [ - "gene_synonym", - "ASAP:ABE-0006145" - ] - ], - "dna_sequence": "ATGGCGGTTGAAGTTAAATACGTAGTCATTCGTGAGGGCGAAGAGAAAATGTCGTTTACCAGCAAAAAGGAAGCCGATGCTTATGACAAAATGCTTGATACGGCGGATCTGCTTGACACCTGGCTGACAAATTCTCCAGTGCAAATGGAAGACGAGCAACGTGAAGCCCTTTCGCTATGGCTGGCAGAACAAAAAGATGTGCTGAGCACCATTCTGAAAACCGGCAAATTACCGTCCCCACAGGTCGTCGGTGCTGAATCCGAAGAGGAAGATGCCTCACACGCGGCCTGA", - "dna_sequence_length": 291, - "functions": [ - "DNA damage-inducible protein regulated by LexA" - ], - "id": "CDS_1840", - "location": [ - [ - "NC_000913", - 1930747, - "-", - 291 - ] - ], - "md5": "a8e5d34f38e0db55b16ca6e89f4771fe", - "parent_gene": "", - "protein_md5": "c1e3d41d2a392cbbdca3ca1af6cf7f7d", - "protein_translation": "MAVEVKYVVIREGEEKMSFTSKKEADAYDKMLDTADLLDTWLTNSPVQMEDEQREALSLWLAEQKDVLSTILKTGKLPSPQVVGAESEEEDASHAA", - "protein_translation_length": 96, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416363.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006162" - ], - [ - "gene_synonym", - "ECK1850" - ], - [ - "gene_synonym", - "purT" - ], - [ - "gene_synonym", - "GI:16129802" - ], - [ - "gene_synonym", - "EcoGene:EG11809" - ], - [ - "gene_synonym", - "b1849" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33221" - ], - [ - "gene_synonym", - "GeneID:946368" - ], - [ - "gene_synonym", - "JW1838" - ] - ], - "dna_sequence": "ATGACGTTATTAGGCACTGCGCTGCGTCCGGCAGCAACTCGCGTGATGTTATTAGGCTCCGGTGAACTGGGTAAAGAAGTGGCAATCGAGTGTCAGCGTCTCGGCGTAGAGGTGATTGCCGTCGATCGCTATGCCGACGCACCAGCCATGCATGTCGCGCATCGCTCCCATGTCATTAATATGCTTGATGGTGATGCATTACGCCGTGTGGTTGAACTGGAAAAACCACATTATATCGTGCCGGAGATCGAAGCTATTGCCACCGATATGCTGATCCAACTTGAAGAGGAAGGACTGAATGTTGTCCCCTGCGCTCGCGCAACGAAATTAACGATGAATCGCGAGGGTATCCGTCGCCTGGCGGCAGAAGAGCTGCAGCTGCCCACTTCCACTTATCGTTTTGCCGATAGCGAAAGCCTTTTCCGCGAGGCGGTTGCTGACATTGGCTATCCCTGCATTGTAAAACCGGTGATGAGCTCTTCCGGCAAGGGGCAGACGTTTATTCGTTCTGCAGAGCAACTTGCTCAGGCATGGAAGTACGCTCAGCAAGGCGGTCGCGCCGGAGCGGGCCGCGTAATTGTTGAAGGCGTCGTTAAGTTTGACTTCGAAATTACCCTGCTAACCGTCAGCGCGGTGGATGGCGTCCATTTCTGTGCACCAGTAGGTCATCGCCAGGAAGATGGCGACTACCGTGAATCCTGGCAACCACAGCAAATGAGCCCGCTTGCCCTTGAACGTGCGCAGGAGATTGCCCGTAAAGTGGTGCTGGCACTGGGCGGTTATGGGTTGTTTGGTGTCGAGCTATTTGTCTGTGGTGATGAGGTGATTTTCAGTGAGGTCTCCCCTCGTCCACATGATACCGGGATGGTGACGTTAATTTCTCAAGATCTCTCAGAGTTTGCCCTGCATGTACGTGCCTTCCTCGGACTTCCGGTTGGCGGGATCCGTCAGTATGGTCCTGCAGCTTCTGCCGTTATTCTGCCACAACTGACCAGTCAGAATGTCACGTTTGATAATGTGCAGAATGCCGTAGGCGCAGATTTGCAGATTCGTTTATTTGGTAAGCCGGAAATTGATGGCAGCCGTCGTCTGGGGGTGGCACTGGCTACTGCAGAGAGTGTTGTTGACGCCATTGAACGCGCGAAGCACGCCGCCGGACAGGTAAAAGTACAGGGTTAA", 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"gene_synonym", - "EcoGene:EG10256" - ], - [ - "gene_synonym", - "kga" - ], - [ - "gene_synonym", - "GI:16129803" - ], - [ - "gene_synonym", - "b1850" - ], - [ - "gene_synonym", - "GeneID:946367" - ], - [ - "gene_synonym", - "NP_416364.1" - ], - [ - "gene_synonym", - "JW1839" - ], - [ - "gene_synonym", - "kdgA" - ], - [ - "gene_synonym", - "hga" - ] - ], - "dna_sequence": "ATGAAAAACTGGAAAACAAGTGCAGAATCAATCCTGACCACCGGCCCGGTTGTACCGGTTATCGTGGTAAAAAAACTGGAACACGCGGTGCCGATGGCAAAAGCGTTGGTTGCTGGTGGGGTGCGCGTTCTGGAAGTGACTCTGCGTACCGAGTGTGCAGTTGACGCTATCCGTGCTATCGCCAAAGAAGTGCCTGAAGCGATTGTGGGTGCCGGTACGGTGCTGAATCCACAGCAGCTGGCAGAAGTCACTGAAGCGGGTGCACAGTTCGCAATTAGCCCGGGTCTGACCGAGCCGCTGCTGAAAGCTGCTACCGAAGGGACTATTCCTCTGATTCCGGGGATCAGCACTGTTTCCGAACTGATGCTGGGTATGGACTACGGTTTGAAAGAGTTCAAATTCTTCCCGGCTGAAGCTAACGGCGGCGTGAAAGCCCTGCAGGCGATCGCGGGTCCGTTCTCCCAGGTCCGTTTCTGCCCGACGGGTGGTATTTCTCCGGCTAACTACCGTGACTACCTGGCGCTGAAAAGCGTGCTGTGCATCGGTGGTTCCTGGCTGGTTCCGGCAGATGCGCTGGAAGCGGGCGATTACGACCGCATTACTAAGCTGGCGCGTGAAGCTGTAGAAGGCGCTAAGCTGTAA", - "dna_sequence_length": 642, - "functions": [ - "KHG/KDPG aldolase", - "2-dehydro-3-deoxy-phosphogluconate/4-hydroxy-2- oxoglutarate aldolase" - ], - "id": "CDS_1842", - "location": [ - [ - "NC_000913", - 1932756, - "-", - 642 - ] - ], - "md5": "5bc8f2ceafd12b49db27d15ac5177de7", - "parent_gene": "", - "protein_md5": "b314da7703a0f4533abc0e706147208f", - "protein_translation": "MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLKAATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKL", - "protein_translation_length": 213, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1840" - ], - [ - "gene_synonym", - "edd" - ], - [ - "gene_synonym", - "ECK1852" - ], - [ - "gene_synonym", - "ASAP:ABE-0006166" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADF6" - ], - [ - "gene_synonym", - "GeneID:946362" - ], - [ - "gene_synonym", - "b1851" - ], - [ - "gene_synonym", - "EcoGene:EG10257" - ], - [ - "gene_synonym", - "GI:16129804" - ], - [ - "gene_synonym", - "NP_416365.1" - ] - ], - "dna_sequence": "ATGAATCCACAATTGTTACGCGTAACAAATCGAATCATTGAACGTTCGCGCGAGACTCGCTCTGCTTATCTCGCCCGGATAGAACAAGCGAAAACTTCGACCGTTCATCGTTCGCAGTTGGCATGCGGTAACCTGGCACACGGTTTCGCTGCCTGCCAGCCAGAAGACAAAGCCTCTTTGAAAAGCATGTTGCGTAACAATATCGCCATCATCACCTCCTATAACGACATGCTCTCCGCGCACCAGCCTTATGAACACTATCCAGAAATCATTCGTAAAGCCCTGCATGAAGCGAATGCGGTTGGTCAGGTTGCGGGCGGTGTTCCGGCGATGTGTGATGGTGTCACCCAGGGGCAGGATGGAATGGAATTGTCGCTGCTAAGCCGCGAAGTGATAGCGATGTCTGCGGCGGTGGGGCTGTCCCATAACATGTTTGATGGTGCTCTGTTCCTCGGTGTGTGCGACAAGATTGTCCCGGGTCTGACGATGGCAGCCCTGTCGTTTGGTCATTTGCCTGCGGTGTTTGTGCCGTCTGGACCGATGGCAAGCGGTTTGCCAAATAAAGAAAAAGTGCGTATTCGCCAGCTTTATGCCGAAGGTAAAGTGGACCGCATGGCCTTACTGGAGTCAGAAGCCGCGTCTTACCATGCGCCGGGAACATGTACTTTCTACGGTACTGCCAACACCAACCAGATGGTGGTGGAGTTTATGGGGATGCAGTTGCCAGGCTCTTCTTTTGTTCATCCGGATTCTCCGCTGCGCGATGCTTTGACCGCCGCAGCTGCGCGTCAGGTTACACGCATGACCGGTAATGGTAATGAATGGATGCCGATCGGTAAGATGATCGATGAGAAAGTGGTGGTGAACGGTATCGTTGCACTGCTGGCGACCGGTGGTTCCACTAACCACACCATGCACCTGGTGGCGATGGCGCGCGCGGCCGGTATTCAGATTAACTGGGATGACTTCTCTGACCTTTCTGATGTTGTACCGCTGATGGCACGTCTCTACCCGAACGGTCCGGCCGATATTAACCACTTCCAGGCGGCAGGTGGCGTACCGGTTCTGGTGCGTGAACTGCTCAAAGCAGGCCTGCTGCATGAAGATGTCAATACGGTGGCAGGTTTTGGTCTGTCTCGTTATACCCTTGAACCATGGCTGAATAATGGTGAACTGGACTGGCGGGAAGGGGCGGAAAAATCACTCGACAGCAATGTGATCGCTTCCTTCGAACAACCTTTCTCTCATCATGGTGGGACAAAAGTGTTAAGCGGTAACCTGGGCCGTGCGGTTATGAAAACCTCTGCCGTGCCGGTTGAGAACCAGGTGATTGAAGCGCCAGCGGTTGTTTTTGAAAGCCAGCATGACGTTATGCCGGCCTTTGAAGCGGGTTTGCTGGACCGCGATTGTGTCGTTGTTGTCCGTCATCAGGGGCCAAAAGCGAACGGAATGCCAGAATTACATAAACTCATGCCGCCACTTGGTGTATTATTGGACCGGTGTTTCAAAATTGCGTTAGTTACCGATGGACGACTCTCCGGCGCTTCAGGTAAAGTGCCGTCAGCTATCCACGTAACACCAGAAGCCTACGATGGCGGGCTGCTGGCAAAAGTGCGCGACGGGGACATCATTCGTGTGAATGGACAGACAGGCGAACTGACGCTGCTGGTAGACGAAGCGGAACTGGCTGCTCGCGAACCGCACATTCCTGACCTGAGCGCGTCACGCGTGGGAACAGGACGTGAATTATTCAGCGCCTTGCGTGAAAAACTGTCCGGTGCCGAACAGGGCGCAACCTGTATCACTTTTTAA", 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"aliases": [ - [ - "gene_synonym", - "JW1841" - ], - [ - "gene_synonym", - "EcoGene:EG11221" - ], - [ - "gene_synonym", - "ECK1853" - ], - [ - "gene_synonym", - "NP_416366.1" - ], - [ - "gene_synonym", - "GeneID:946370" - ], - [ - "gene_synonym", - "zwf" - ], - [ - "gene_synonym", - "b1852" - ], - [ - "gene_synonym", - "GI:16129805" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC53" - ], - [ - "gene_synonym", - "ASAP:ABE-0006171" - ] - ], - "dna_sequence": "ATGGCGGTAACGCAAACAGCCCAGGCCTGTGACCTGGTCATTTTCGGCGCGAAAGGCGACCTTGCGCGTCGTAAATTGCTGCCTTCCCTGTATCAACTGGAAAAAGCCGGTCAGCTCAACCCGGACACCCGGATTATCGGCGTAGGGCGTGCTGACTGGGATAAAGCGGCATATACCAAAGTTGTCCGCGAGGCGCTCGAAACTTTCATGAAAGAAACCATTGATGAAGGTTTATGGGACACCCTGAGTGCACGTCTGGATTTTTGTAATCTCGATGTCAATGACACTGCTGCATTCAGCCGTCTCGGCGCGATGCTGGATCAAAAAAATCGTATCACCATTAACTACTTTGCCATGCCGCCCAGCACTTTTGGCGCAATTTGCAAAGGGCTTGGCGAGGCAAAACTGAATGCTAAACCGGCACGCGTAGTCATGGAGAAACCGCTGGGGACGTCGCTGGCGACCTCGCAGGAAATCAATGATCAGGTTGGCGAATACTTCGAGGAGTGCCAGGTTTACCGTATCGACCACTATCTTGGTAAAGAAACGGTGCTGAACCTGTTGGCGCTGCGTTTTGCTAACTCCCTGTTTGTGAATAACTGGGACAATCGCACCATTGATCATGTTGAGATTACCGTGGCAGAAGAAGTGGGGATCGAAGGGCGCTGGGGCTATTTTGATAAAGCCGGTCAGATGCGCGACATGATCCAGAACCACCTGCTGCAAATTCTTTGCATGATTGCGATGTCTCCGCCGTCTGACCTGAGCGCAGACAGCATCCGCGATGAAAAAGTGAAAGTACTGAAGTCTCTGCGCCGCATCGACCGCTCCAACGTACGCGAAAAAACCGTACGCGGGCAATATACTGCGGGCTTCGCCCAGGGCAAAAAAGTGCCGGGATATCTGGAAGAAGAGGGCGCGAACAAGAGCAGCAATACAGAAACTTTCGTGGCGATCCGCGTCGACATTGATAACTGGCGCTGGGCCGGTGTGCCATTCTACCTGCGTACTGGTAAACGTCTGCCGACCAAATGTTCTGAAGTCGTGGTCTATTTCAAAACACCTGAACTGAATCTGTTTAAAGAATCGTGGCAGGATCTGCCGCAGAATAAACTGACTATCCGTCTGCAACCTGATGAAGGCGTGGATATCCAGGTACTGAATAAAGTTCCTGGCCTTGACCACAAACATAACCTGCAAATCACCAAGCTGGATCTGAGCTATTCAGAAACCTTTAATCAGACGCATCTGGCGGATGCCTATGAACGTTTGCTGCTGGAAACCATGCGTGGTATTCAGGCACTGTTTGTACGTCGCGACGAAGTGGAAGAAGCCTGGAAATGGGTAGACTCCATTACTGAGGCGTGGGCGATGGACAATGATGCGCCGAAACCGTATCAGGCCGGAACCTGGGGACCCGTTGCCTCGGTGGCGATGATTACCCGTGATGGTCGTTCCTGGAATGAGTTTGAGTAA", 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- "gene_synonym", - "JW1842" - ], - [ - "gene_synonym", - "EcoGene:EG12860" - ], - [ - "gene_synonym", - "ASAP:ABE-0006179" - ], - [ - "gene_synonym", - "NP_416367.1" - ], - [ - "gene_synonym", - "GeneID:946373" - ], - [ - "gene_synonym", - "b1853" - ], - [ - "gene_synonym", - "GI:16129806" - ], - [ - "gene_synonym", - "yebK" - ], - [ - "gene_synonym", - "hexR" - ] - ], - "dna_sequence": "ATGAATATGCTGGAAAAAATCCAGTCTCAGCTGGAACATTTGAGCAAATCAGAGCGCAAAGTTGCCGAGGTCATTCTGGCTTCGCCCGATAACGCGATCCATTCGAGTATTGCTGCTATGGCACTGGAAGCCAATGTTAGCGAACCGACGGTGAATCGTTTCTGTCGCAGCATGGACACGCGCGGTTTTCCTGATTTTAAACTTCATCTGGCACAGAGTCTGGCGAATGGCACTCCCTATGTTAATCGCAATGTCAATGAAGATGACAGCGTTGAATCATACACAGGGAAAATATTTGAGTCCGCAATGGCAACGCTTGATCATGTCCGTCATTCACTGGATAAATCTGCCATCAACCGCGCCGTCGACTTGCTCACTCAGGCAAAAAAAATCGCCTTTTTCGGATTAGGCTCTTCAGCCGCCGTTGCCCACGATGCGATGAATAAGTTCTTTCGTTTTAATGTTCCGGTGGTGTACTCCGATGATATCGTGCTGCAACGCATGAGTTGTATGAATTGTAGCGACGGAGACGTGGTGGTGCTGATTTCTCACACTGGAAGAACAAAAAATCTGGTCGAGCTGGCGCAGCTGGCACGCGAAAACGACGCCATGGTGATTGCCCTCACCTCTGCGGGTACCCCGCTCGCCCGGGAAGCAACGCTGGCAATTACCCTCGACGTACCGGAAGATACTGACATTTATATGCCCATGGTTTCTCGACTTGCACAGCTGACCGTGATAGATGTGCTGGCGACAGGATTTACTTTGCGACGCGGTGCAAAATTCAGAGATAACTTGAAGCGGGTCAAAGAAGCGCTGAAGGAATCGCGTTTTGATAAGCAGTTACTTAATTTAAGTGACGATCGCTAA", - "dna_sequence_length": 870, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_1845", - "location": [ - [ - "NC_000913", - 1936652, - "+", - 870 - ] - ], - "md5": "648469b6f1d8b261b0c63faaeb60743d", - "parent_gene": "", - "protein_md5": "778f496903bce38763ee161e70354b1c", - "protein_translation": "MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPTVNRFCRSMDTRGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKSAINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLISHTGRTKNLVELAQLARENDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKQLLNLSDDR", - "protein_translation_length": 289, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1855" - ], - [ - "gene_synonym", - "EcoGene:EG10803" - ], - [ - "gene_synonym", - "GeneID:946527" - ], - [ - "gene_synonym", - "JW1843" - ], - [ - "gene_synonym", - "NP_416368.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006182" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21599" - ], - [ - "gene_synonym", - "GI:16129807" - ], - [ - "gene_synonym", - "b1854" - ], - [ - "gene_synonym", - "pykA" - ] - ], - "dna_sequence": "ATGTCCAGAAGGCTTCGCAGAACAAAAATCGTTACCACGTTAGGCCCAGCAACAGATCGCGATAATAATCTTGAAAAAGTTATCGCGGCGGGTGCCAACGTTGTACGTATGAACTTTTCTCACGGCTCGCCTGAAGATCACAAAATGCGCGCGGATAAAGTTCGTGAGATTGCCGCAAAACTGGGGCGTCATGTGGCTATTCTGGGTGACCTCCAGGGGCCCAAAATCCGTGTATCCACCTTTAAAGAAGGCAAAGTTTTCCTCAATATTGGGGATAAATTCCTGCTCGACGCCAACCTGGGTAAAGGTGAAGGCGACAAAGAAAAAGTCGGTATCGACTACAAAGGCCTGCCTGCTGACGTCGTGCCTGGTGACATCCTGCTGCTGGACGATGGTCGCGTCCAGTTAAAAGTACTGGAAGTTCAGGGCATGAAAGTGTTCACCGAAGTCACCGTCGGTGGTCCCCTCTCCAACAATAAAGGTATCAACAAACTTGGCGGCGGTTTGTCGGCTGAAGCGCTGACCGAAAAAGACAAAGCAGACATTAAGACTGCGGCGTTGATTGGCGTAGATTACCTGGCTGTCTCCTTCCCACGCTGTGGCGAAGATCTGAACTATGCCCGTCGCCTGGCACGCGATGCAGGATGTGATGCGAAAATTGTTGCCAAGGTTGAACGTGCGGAAGCCGTTTGCAGCCAGGATGCAATGGATGACATCATCCTCGCCTCTGACGTGGTAATGGTTGCACGTGGCGACCTCGGTGTGGAAATTGGCGACCCGGAACTGGTCGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGCGACCCAGATGATGGAGTCAATGATTACTAACCCGATGCCGACGCGTGCAGAAGTCATGGACGTAGCAAACGCCGTTCTGGATGGTACTGACGCTGTGATGCTGTCTGCAGAAACTGCCGCTGGGCAGTATCCGTCAGAAACCGTTGCAGCCATGGCGCGCGTTTGCCTGGGTGCGGAAAAAATCCCGAGCATCAACGTTTCTAAACACCGTCTGGACGTTCAGTTCGACAATGTGGAAGAAGCTATTGCCATGTCAGCAATGTACGCAGCTAACCACCTGAAAGGCGTTACGGCGATCATCACCATGACCGAATCGGGTCGTACCGCGCTGATGACCTCCCGTATCAGCTCTGGTCTGCCAATTTTCGCCATGTCGCGCCATGAACGTACGCTGAACCTGACTGCTCTCTATCGTGGCGTTACGCCGGTGCACTTTGATAGCGCTAATGACGGCGTAGCAGCTGCCAGCGAAGCGGTTAATCTGCTGCGCGATAAAGGTTACTTGATGTCTGGTGACCTGGTGATTGTCACCCAGGGCGACGTGATGAGTACCGTGGGTTCTACTAATACCACGCGTATTTTAACGGTAGAGTAA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P24205" - ], - [ - "gene_synonym", - "lpxM" - ], - [ - "gene_synonym", - "ASAP:ABE-0006185" - ], - [ - "gene_synonym", - "waaN" - ], - [ - "gene_synonym", - "EcoGene:EG10614" - ], - [ - "gene_synonym", - "b1855" - ], - [ - "gene_synonym", - "NP_416369.1" - ], - [ - "gene_synonym", - "msbB" - ], - [ - "gene_synonym", - "GI:16129808" - ], - [ - "gene_synonym", - "mlt" - ] - ], - "dna_sequence": "ATGGAAACGAAAAAAAATAATAGCGAATACATTCCTGAGTTTGATAAATCCTTTCGCCACCCGCGCTACTGGGGAGCATGGCTGGGCGTAGCAGCGATGGCGGGTATCGCTTTAACGCCGCCAAAGTTCCGTGATCCCATTCTGGCACGGCTGGGACGTTTTGCCGGACGACTGGGAAAAAGCTCACGCCGTCGTGCGTTAATCAATCTGTCGCTCTGCTTTCCAGAACGTAGTGAAGCTGAACGCGAAGCGATTGTTGATGAGATGTTTGCCACCGCGCCGCAAGCGATGGCAATGATGGCTGAGTTGGCAATACGCGGGCCGGAGAAAATTCAGCCGCGCGTTGACTGGCAAGGGCTGGAGATCATCGAAGAGATGCGGCGTAATAACGAGAAAGTTATCTTTCTGGTGCCGCACGGTTGGGCCGTCGATATTCCTGCCATGCTGATGGCCTCGCAAGGGCAGAAAATGGCAGCGATGTTCCATAATCAGGGCAACCCGGTTTTTGATTATGTCTGGAACACGGTGCGTCGTCGCTTTGGCGGTCGTCTGCATGCGAGAAATGACGGTATTAAACCATTCATCCAGTCGGTACGTCAGGGGTACTGGGGATATTATTTACCCGATCAGGATCATGGCCCAGAGCACAGCGAATTTGTGGATTTCTTTGCCACCTATAAAGCGACGTTGCCCGCGATTGGTCGTTTGATGAAAGTGTGCCGTGCGCGCGTTGTACCGCTGTTTCCGATTTATGATGGCAAGACGCATCGTCTGACGATTCAGGTGCGCCCACCGATGGATGATCTGTTAGAGGCGGATGATCATACGATTGCGCGGCGGATGAATGAAGAAGTCGAGATTTTTGTTGGTCCGCGACCAGAACAATACACCTGGATACTAAAATTGCTGAAAACTCGCAAACCGGGCGAAATCCAGCCGTATAAGCGCAAAGATCTTTATCCCATCAAATAA", - "dna_sequence_length": 972, - "functions": [ - "myristoyl-acyl carrier protein (ACP)-dependent acyltransferase" - ], - "id": "CDS_1847", - "location": [ - [ - "NC_000913", - 1940193, - "-", - 972 - ] - ], - "md5": "13806d9f4abf5c1eb9f68646987c6664", - "parent_gene": "", - "protein_md5": "d6e3783442cec3367f6157de8b1cd3f3", - "protein_translation": "METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMAGIALTPPKFRDPILARLGRFAGRLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAELAIRGPEKIQPRVDWQGLEIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAMFHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSEFVDFFATYKATLPAIGRLMKVCRARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHTIARRMNEEVEIFVGPRPEQYTWILKLLKTRKPGEIQPYKRKDLYPIK", - "protein_translation_length": 323, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5304" - ], - [ - "gene_synonym", - "ASAP:ABE-0006189" - ], - [ - "gene_synonym", - "GeneID:946376" - ], - [ - "gene_synonym", - "mepM" - ], - [ - "gene_synonym", - "GI:90111345" - ], - [ - "gene_synonym", - "EcoGene:EG10013" - ], - [ - "gene_synonym", - "ECK1857" - ], - [ - "gene_synonym", - "b1856" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFS9" - ], - [ - "gene_synonym", - "NP_416370.2" - ], - [ - "gene_synonym", - "yebA" - ] - ], - "dna_sequence": "GTGCAACAGATAGCCCGCTCTGTCGCCCTGGCGTTTAATAATTTACCGCGACCACACCGCGTTATGTTGGGGTCGCTCACCGTTCTTACTCTGGCCGTCGCTGTCTGGCGGCCTTATGTTTATCACCGTGATGCCACGCCAATTGTCAAAACCATTGAGCTGGAACAGAACGAAATTCGTTCGCTCTTACCTGAAGCCAGTGAGCCGATTGATCAAGCTGCACAAGAAGATGAAGCCATTCCCCAGGACGAACTGGATGACAAAATCGCCGGTGAAGCGGGCGTGCATGAATATGTTGTTTCCACTGGCGATACGCTAAGCAGCATTCTCAATCAGTATGGTATTGATATGGGTGATATCACCCAACTGGCTGCGGCCGACAAAGAATTGCGTAACCTGAAAATCGGTCAACAACTCTCCTGGACATTAACCGCGGACGGCGAACTGCAGCGCCTCACCTGGGAAGTGTCTCGTCGTGAAACCCGAACCTATGACCGTACTGCCGCTAACGGTTTTAAAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTTGTTGCCAGCGCCAGAAACGCCGGTTTAACCAGCGCCGAAGTGAGCGCAGTGATTAAAGCCATGCAGTGGCAAATGGATTTCCGCAAACTGAAAAAAGGCGATGAATTTGCGGTGTTAATGTCTCGAGAAATGCTTGATGGTAAACGTGAGCAAAGCCAGCTGCTGGGCGTACGTTTGCGTTCAGAAGGTAAAGATTATTACGCTATCCGCGCTGAAGATGGCAAATTCTACGATCGTAACGGTACTGGTCTGGCGAAAGGATTCTTGCGATTCCCGACGGCGAAACAGTTCCGTATCTCGTCTAATTTTAACCCGCGTCGTACTAATCCGGTGACCGGTCGCGTTGCACCACACAGAGGTGTTGATTTCGCCATGCCGCAGGGTACGCCAGTGCTTTCAGTGGGTGACGGTGAAGTGGTGGTTGCCAAACGCAGTGGCGCAGCAGGTTATTATGTGGCTATTCGTCATGGTCGCAGCTACACCACGCGTTATATGCACTTGCGCAAGATTCTGGTGAAACCGGGACAGAAGGTGAAACGTGGCGACCGTATCGCGCTTTCCGGTAATACCGGACGTTCAACCGGGCCGCATCTGCACTATGAAGTATGGATAAACCAGCAGGCCGTAAACCCGCTGACGGCAAAACTGCCGCGTACCGAAGGGCTGACCGGCTCCGATCGTCGCGAATTCCTGGCGCAGGCCAAAGAGATTGTGCCGCAGCTACGGTTTGATTAA", 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"EcoGene:EG12678" - ], - [ - "gene_synonym", - "ECK1858" - ], - [ - "gene_synonym", - "ASAP:ABE-0006191" - ], - [ - "gene_synonym", - "yzzP" - ], - [ - "gene_synonym", - "yebL" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39172" - ], - [ - "gene_synonym", - "b1857" - ], - [ - "gene_synonym", - "JW5831" - ], - [ - "gene_synonym", - "znuA" - ], - [ - "gene_synonym", - "GI:90111346" - ] - ], - "dna_sequence": "ATGTTACATAAAAAAACGCTTCTTTTCGCAGCATTATCCGCCGCTCTCTGGGGAGGTGCAACACAGGCCGCAGATGCCGCCGTTGTCGCTTCGCTTAAACCCGTTGGGTTCATCGCTTCTGCCATTGCTGATGGGGTAACAGAAACAGAGGTTTTACTTCCTGACGGCGCTTCAGAACATGATTATTCACTGCGCCCATCGGATGTAAAACGCTTACAGAACGCGGACTTAGTCGTTTGGGTTGGCCCGGAGATGGAAGCGTTTATGCAAAAACCGGTAAGCAAATTACCAGGAGCGAAGCAGGTAACGATTGCGCAGCTTGAAGATGTGAAACCGCTACTGATGAAAAGTATTCACGGCGATGATGATGATCACGACCACGCGGAAAAAAGTGACGAAGATCACCATCACGGCGATTTCAACATGCATCTTTGGCTTTCCCCAGAGATAGCGCGGGCTACAGCGGTTGCAATCCATGGAAAATTAGTGGAACTTATGCCGCAAAGTCGAGCCAAACTTGACGCCAACCTGAAGGATTTTGAGGCACAATTAGCCTCAACCGAAACGCAGGTTGGTAACGAGCTCGCGCCGCTCAAGGGGAAAGGTTATTTCGTTTTTCACGATGCTTACGGCTATTTCGAAAAACAGTTTGGACTGACACCGCTTGGTCATTTTACCGTTAACCCTGAGATTCAACCTGGCGCGCAGCGTTTACATGAAATAAGAACACAGTTGGTTGAGCAAAAAGCAACCTGCGTTTTTGCTGAGCCACAGTTCAGGCCAGCGGTCGTTGAGAGCGTCGCACGAGGGACATCCGTTCGTATGGGAACGTTGGATCCCCTGGGGACGAATATCAAACTGGGTAAAACAAGCTATTCAGAATTCCTGAGTCAATTAGCCAACCAGTATGCGAGCTGCCTGAAAGGAGATTAA", - "dna_sequence_length": 933, - "functions": [ - "zinc ABC transporter periplasmic binding protein" - ], - "id": "CDS_1849", - "location": [ - [ - "NC_000913", - 1942583, - "-", - 933 - ] - ], - "md5": "b1ce9eef0b952f75b7db82e226b754e0", - "parent_gene": "", - "protein_md5": "0eb68fb20fe9ce365ac15a74498d040a", - "protein_translation": "MLHKKTLLFAALSAALWGGATQAADAAVVASLKPVGFIASAIADGVTETEVLLPDGASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLPGAKQVTIAQLEDVKPLLMKSIHGDDDDHDHAEKSDEDHHHGDFNMHLWLSPEIARATAVAIHGKLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMGTLDPLGTNIKLGKTSYSEFLSQLANQYASCLKGD", - "protein_translation_length": 310, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9X1" - ], - [ - "gene_synonym", - "JW1847" - ], - [ - "gene_synonym", - "ASAP:ABE-0006198" - ], - [ - "gene_synonym", - "GeneID:946374" - ], - [ - "gene_synonym", - "ECK1859" - ], - [ - "gene_synonym", - "yebM" - ], - [ - "gene_synonym", - "NP_416372.1" - ], - [ - "gene_synonym", - "EcoGene:EG13132" - ], - [ - "gene_synonym", - "znuC" - ], - [ - "gene_synonym", - "b1858" - ], - [ - "gene_synonym", - "GI:16129811" - ] - ], - "dna_sequence": "ATGACAAGTCTGGTTTCCCTGGAAAATGTCTCGGTTTCTTTTGGCCAACGCCGCGTCCTCTCTGATGTGTCGCTGGAACTTAAACCTGGAAAAATTTTGACTTTACTTGGGCCAAATGGCGCAGGTAAGTCGACACTGGTACGGGTAGTGCTCGGGCTGGTAACACCCGATGAAGGGGTTATCAAGCGCAACGGAAAACTGCGCATCGGCTATGTACCGCAGAAGCTGTATCTCGACACCACGTTGCCACTGACCGTAAACCGTTTTTTACGCTTACGCCCTGGTACACATAAAGAAGATATTTTGCCTGCACTGAAACGTGTCCAGGCCGGGCACCTGATTAACGCACCGATGCAAAAGCTCTCTGGTGGCGAAACGCAGCGTGTACTATTAGCGCGAGCATTGTTAAATCGCCCGCAATTATTAGTGCTGGATGAACCCACTCAAGGCGTGGATGTAAATGGCCAGGTGGCGTTATATGACCTTATTGACCAACTGCGTCGTGAACTGGATTGTGGCGTTTTAATGGTTTCTCACGATCTGCATCTGGTGATGGCAAAAACCGATGAAGTGCTGTGCCTGAATCACCACATTTGTTGTTCCGGCACACCGGAAGTTGTTTCCCTGCATCCGGAGTTTATTTCAATGTTTGGTCCTCGTGGTGCTGAACAACTGGGTATCTATCGCCATCATCATAACCATCGTCACGATTTACAGGGACGAATTGTTTTGCGTCGGGGAAATGATCGCTCATGA", - "dna_sequence_length": 756, - "functions": [ - "zinc ABC transporter ATPase" - ], - "id": "CDS_1850", - "location": [ - [ - "NC_000913", - 1942662, - "+", - 756 - ] - ], - "md5": "a53491707cd4e18b88715094d7a0798c", - "parent_gene": "", - "protein_md5": "5e314b5dec9369d3b0ed876ad0e66ed4", - "protein_translation": "MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVTPDEGVIKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDILPALKRVQAGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCGVLMVSHDLHLVMAKTDEVLCLNHHICCSGTPEVVSLHPEFISMFGPRGAEQLGIYRHHHNHRHDLQGRIVLRRGNDRS", - "protein_translation_length": 251, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1860" - ], - [ - "gene_synonym", - "EcoGene:EG12368" - ], - [ - "gene_synonym", - "JW1848" - ], - [ - "gene_synonym", - "ASAP:ABE-0006201" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39832" - ], - [ - "gene_synonym", - "yebI" - ], - [ - "gene_synonym", - "znuB" - ], - [ - "gene_synonym", - "b1859" - ], - [ - "gene_synonym", - "GI:16129812" - ], - [ - "gene_synonym", - "GeneID:946372" - ], - [ - "gene_synonym", - "NP_416373.1" - ] - ], - "dna_sequence": "ATGATTGAATTATTATTTCCCGGTTGGTTAGCCGGGATCATGCTCGCCTGTGCCGCGGGTCCGCTGGGTTCGTTTGTAGTCTGGCGTCGTATGTCTTATTTCGGTGATACGCTGGCTCATGCCTCATTACTTGGCGTCGCGTTTGGTTTGTTGCTGGACGTGAATCCATTCTATGCGGTGATTGCCGTTACGCTGCTGCTGGCGGGCGGTCTGGTATGGCTGGAGAAGCGTCCACAGCTGGCGATCGACACGTTATTAGGGATTATGGCGCACAGTGCCCTGTCGCTGGGCCTGGTGGTCGTGAGTCTGATGTCTAATATTCGTGTTGATTTGATGGCTTACCTGTTCGGTGATTTGCTGGCAGTGACGCCAGAAGATCTCATCTCTATTGCGATTGGCGTGGTCATCGTGGTGGCTATTTTGTTCTGGCAATGGCGCAATTTGCTGTCAATGACGATAAGCCCGGATCTGGCGTTTGTTGATGGTGTGAAATTACAGCGAGTGAAATTGTTGTTGATGCTGGTGACGGCATTGACGATTGGTGTAGCGATGAAATTTGTCGGTGCGTTGATTATTACTTCGTTGCTGATTATTCCTGCTGCTACTGCGCGTCGCTTTGCCCGCACGCCGGAACAGATGGCTGGTGTCGCTGTTTTGGTGGGGATGGTGGCAGTGACTGGCGGTTTAACCTTTTCCGCGGTTTACGATACGCCGGCGGGTCCGTCGGTGGTGCTATGTGCGGCACTGTTATTTATTCTCAGTATGATGAAAAAGCAGGCCAGCTAA", - "dna_sequence_length": 786, - "functions": [ - "zinc ABC transporter permease" - ], - "id": "CDS_1851", - "location": [ - [ - "NC_000913", - 1943414, - "+", - 786 - ] - ], - "md5": "59234b461d7d06383dd550acfacc5c1b", - "parent_gene": "", - "protein_md5": "9a5824f523e2de95b325027f33b9ef77", - "protein_translation": "MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLLGVAFGLLLDVNPFYAVIAVTLLLAGGLVWLEKRPQLAIDTLLGIMAHSALSLGLVVVSLMSNIRVDLMAYLFGDLLAVTPEDLISIAIGVVIVVAILFWQWRNLLSMTISPDLAFVDGVKLQRVKLLLMLVTALTIGVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAVLVGMVAVTGGLTFSAVYDTPAGPSVVLCAALLFILSMMKKQAS", - "protein_translation_length": 261, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1861" - ], - [ - "gene_synonym", - "ASAP:ABE-0006204" - ], - [ - "gene_synonym", - "EcoGene:EG10924" - ], - [ - "gene_synonym", - "NP_416374.1" - ], - [ - "gene_synonym", - "JW1849" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A812" - ], - [ - "gene_synonym", - "GeneID:946371" - ], - [ - "gene_synonym", - "b1860" - ], - [ - "gene_synonym", - "ruvB" - ], - [ - "gene_synonym", - "GI:16129813" - ] - ], - "dna_sequence": "ATGATTGAAGCAGACCGTCTGATTTCTGCCGGTACCACTTTGCCGGAAGATGTAGCAGATCGCGCCATTCGCCCCAAATTACTGGAAGAGTATGTTGGTCAGCCGCAGGTTCGTTCACAGATGGAGATTTTCATCAAAGCAGCGAAACTGCGCGGCGATGCCCTCGATCATTTGTTGATTTTTGGTCCTCCGGGGTTGGGTAAAACTACGCTTGCCAACATTGTCGCCAATGAAATGGGCGTTAATTTACGCACGACTTCTGGTCCGGTGCTGGAAAAGGCGGGCGATTTGGCTGCGATGCTCACTAACCTTGAACCGCATGACGTGCTGTTTATTGATGAGATCCACCGTCTATCGCCAGTTGTTGAAGAAGTGCTGTACCCGGCAATGGAAGACTACCAACTGGATATCATGATTGGTGAAGGTCCGGCGGCACGCTCCATTAAAATTGATTTGCCGCCGTTTACCCTGATTGGTGCAACCACGCGCGCAGGTTCGCTGACATCACCGTTGCGCGACCGTTTTGGTATTGTGCAACGTCTGGAGTTTTATCAGGTGCCGGATCTGCAATATATCGTCAGTCGCAGCGCACGCTTTATGGGGCTTGAGATGAGTGATGACGGCGCGCTGGAAGTTGCTCGTCGCGCTCGCGGTACGCCGCGCATTGCCAACCGTCTGCTGCGTCGAGTGCGTGATTTCGCCGAAGTGAAGCACGATGGCACCATCTCGGCAGATATCGCTGCTCAGGCGCTGGATATGTTGAATGTCGATGCTGAAGGTTTCGATTATATGGACCGCAAATTGTTGCTGGCGGTAATCGATAAGTTCTTTGGTGGACCTGTAGGTCTGGATAACCTGGCGGCAGCCATTGGCGAAGAACGTGAAACCATTGAGGATGTGCTGGAACCTTATTTGATTCAGCAAGGCTTTTTGCAGCGTACACCGCGTGGGCGTATGGCGACGACGCGGGCGTGGAATCACTTTGGCATAACGCCGCCAGAAATGCCGTAA", 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], - [ - "gene_synonym", - "JW1850" - ], - [ - "gene_synonym", - "b1861" - ], - [ - "gene_synonym", - "ruvA" - ], - [ - "gene_synonym", - "GI:16129814" - ], - [ - "gene_synonym", - "GeneID:946369" - ] - ], - "dna_sequence": "GTGATAGGCAGACTCAGAGGCATCATCATTGAAAAACAACCCCCGCTGGTGTTAATTGAAGTGGGCGGCGTAGGCTATGAAGTGCATATGCCGATGACCTGTTTTTATGAACTCCCTGAAGCGGGTCAGGAAGCGATCGTTTTCACCCACTTTGTGGTGCGTGAAGACGCGCAACTGCTGTACGGTTTTAACAATAAACAAGAGCGCACATTGTTCAAAGAGTTGATCAAAACCAACGGCGTCGGCCCGAAGTTGGCGCTGGCGATCCTCTCCGGAATGTCAGCGCAGCAGTTCGTTAATGCCGTTGAGCGTGAAGAAGTGGGGGCACTGGTGAAACTGCCGGGTATTGGCAAAAAAACCGCCGAACGCTTGATTGTTGAAATGAAAGACCGATTTAAAGGTTTGCATGGCGATCTCTTTACGCCAGCCGCCGACCTGGTACTCACGTCTCCTGCCAGCCCGGCGACCGACGATGCTGAACAAGAAGCGGTTGCCGCGCTGGTGGCGCTGGGCTATAAACCACAAGAAGCAAGCCGCATGGTGAGCAAAATCGCTCGCCCTGACGCCAGCAGTGAAACTTTAATTCGCGAAGCCCTACGCGCCGCGTTATGA", - "dna_sequence_length": 612, - "functions": [ - "component of RuvABC resolvasome, regulatory subunit" - ], - "id": "CDS_1853", - "location": [ - [ - "NC_000913", - 1945976, - "-", - 612 - ] - ], - "md5": "d15cae6537d6f7da157124f4e0e58f6d", - "parent_gene": "", - "protein_md5": "92baf66389a26f30c4b58b75956d9300", - "protein_translation": "MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL", - "protein_translation_length": 203, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:226524725" - ], - [ - "gene_synonym", - "yobI" - ], - [ - "gene_synonym", - "EcoGene:EG14482" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P604" - ], - [ - "gene_synonym", - "YP_002791244.1" - ], - [ - "gene_synonym", - "b4677" - ], - [ - "gene_synonym", - "ECK4492" - ], - [ - "gene_synonym", - "GeneID:7751641" - ] - ], - "dna_sequence": "ATGTATATTTTTATTACGCATTTCTTCACTGAATATGTAATATTAAAATATTTGCTTCCAATATAA", - "dna_sequence_length": 66, - "functions": [ - "uncharacterized protein" - ], - 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"GTGAATATTAATTACCCTGCTGAATATGAAATTGGAGATATCGTCTTTACATGTATAGGTGCTGCCTTATTTGGTCAAATATCAGCTGCATCAAATTGCTGGAGTAATCACGTCGGGATCATTATCGGTCATAACGGTGAAGACTTCCTGGTTGCAGAAAGCCGGGTTCCCCTTTCAACCATCACCACGCTATCTCGTTTTATTAAACGTTCGTCTAATCAACGCTATGCTATAAAGCGATTAGACGCTGGGCTGACAGAACGACAAAAACAACGAATTGTTGAACAGGTTCCCTCCCGGCTACGCAAACTTTACCACACCGGTTTTAAATACGAATCTTCGCGCCAGTTCTGTTCAAAATTTGTTTTTGATATTTATAAAGAAGCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAA", - "dna_sequence_length": 603, - "functions": [ - "DUF830 family protein" - ], - "id": "CDS_1855", - "location": [ - [ - "NC_000913", - 1946251, - "+", - 603 - ] - ], - "md5": "2b8717f91d2f43b7c6fb3199a0a9b56c", - "parent_gene": "", - "protein_md5": "75d5ea232bf9f203fd54bb211467c622", - "protein_translation": "MNINYPAEYEIGDIVFTCIGAALFGQISAASNCWSNHVGIIIGHNGEDFLVAESRVPLSTITTLSRFIKRSSNQRYAIKRLDAGLTERQKQRIVEQVPSRLRKLYHTGFKYESSRQFCSKFVFDIYKEALCIPVGEIETFGELLNSNPNAKLTFWKFWFLGSIPWERKTVTPASLWHHPGLVLIHAEGVETPQPELTEAV", - "protein_translation_length": 200, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1852" - ], - [ - "gene_synonym", - "GI:16129816" - ], - [ - "gene_synonym", - "GeneID:946378" - ], - [ - "gene_synonym", - "ECK1864" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A814" - ], - [ - "gene_synonym", - "ASAP:ABE-0006215" - ], - [ - "gene_synonym", - "b1863" - ], - [ - "gene_synonym", - "ruvC" - ], - [ - "gene_synonym", - "NP_416377.1" - ], - [ - "gene_synonym", - "EcoGene:EG10925" - ] - ], - "dna_sequence": "ATGGCTATTATTCTCGGCATTGATCCGGGTTCGCGCGTGACCGGCTACGGCGTCATCCGCCAGGTAGGTAGGCAACTGTCCTACCTGGGTAGCGGATGCATCCGCACCAAAGTGGATGATTTACCGTCTCGTCTGAAACTCATCTATGCGGGCGTGACGGAAATCATCACCCAGTTCCAGCCTGATTATTTCGCCATTGAACAAGTCTTTATGGCAAAGAACGCTGACTCAGCCCTGAAACTGGGCCAGGCGCGCGGCGTGGCGATTGTGGCGGCGGTGAATCAGGAGTTGCCAGTATTTGAATACGCGGCACGTCAGGTAAAGCAAACGGTGGTAGGTATTGGCAGTGCCGAAAAAAGCCAGGTGCAGCATATGGTCCGCACCTTGCTGAAACTGCCCGCTAATCCACAGGCGGATGCCGCCGATGCGCTGGCGATTGCTATCACCCACTGCCACGTTAGTCAGAATGCGATGCAGATGAGCGAATCGCGGCTGAACCTGGCGAGAGGGCGACTGCGTTAA", - "dna_sequence_length": 522, - "functions": [ - "component of RuvABC resolvasome, endonuclease" - ], - "id": "CDS_1856", - "location": [ - [ - "NC_000913", - 1947376, - "-", - 522 - ] - ], - "md5": "52d2b274eceb636064e865921005450d", - "parent_gene": "", - "protein_md5": "539598d2fa64fa2ffaa2e499b33e63ab", - "protein_translation": "MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQMSESRLNLARGRLR", - "protein_translation_length": 173, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1853" - ], - [ - "gene_synonym", - "ECK1865" - ], - [ - "gene_synonym", - "GeneID:946379" - ], - [ - "gene_synonym", - "ASAP:ABE-0006219" - ], - [ - "gene_synonym", - "NP_416378.1" - ], - [ - "gene_synonym", - "b1864" - ], - [ - "gene_synonym", - "EcoGene:EG11137" - ], - [ - "gene_synonym", - "GI:16129817" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8A0" - ], - [ - "gene_synonym", - "yebC" - ] - ], - "dna_sequence": "ATGGCAGGTCATAGTAAATGGGCCAACACCAGACATCGTAAAGCTGCGCAGGATGCTAAGCGCGGTAAAATCTTCACTAAAATCATTCGTGAGCTGGTAACCGCGGCTAAGCTGGGCGGTGGCGATCCGGACGCTAACCCGCGTCTGCGTGCGGCGGTGGATAAAGCACTGTCTAACAACATGACCCGTGACACACTGAACCGCGCAATTGCACGTGGTGTGGGCGGTGATGATGATGCAAACATGGAAACCATCATCTACGAAGGTTACGGTCCTGGCGGCACGGCAATCATGATTGAATGTCTGTCTGACAACCGCAACCGTACCGTTGCTGAAGTGCGTCATGCATTTAGCAAATGTGGCGGTAACCTCGGTACTGATGGTTCCGTTGCCTATCTGTTCAGCAAAAAAGGCGTGATCTCCTTCGAGAAAGGCGATGAAGACACCATCATGGAAGCAGCACTGGAAGCAGGTGCTGAAGACGTTGTGACCTATGATGACGGCGCGATTGATGTCTACACTGCATGGGAAGAAATGGGTAAAGTGCGCGACGCTCTGGAAGCGGCAGGTCTGAAAGCAGACAGCGCGGAAGTTTCCATGATCCCGTCTACCAAAGCTGATATGGATGCAGAAACCGCACCGAAACTGATGCGTCTGATCGATATGCTGGAAGATTGCGACGACGTGCAGGAAGTTTACCATAACGGTGAAATCTCTGATGAGGTCGCAGCGACTCTCTGA", - "dna_sequence_length": 741, - "functions": [ - "UPF0082 family protein" - ], - "id": "CDS_1857", - "location": [ - [ - "NC_000913", - 1948151, - "-", - 741 - ] - ], - "md5": "559efe40cc75ee19abd799b41b7d6482", - "parent_gene": "", - "protein_md5": "fbfddc817c4c3720caa0df1f266bcd50", - "protein_translation": "MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISDEVAATL", - "protein_translation_length": 246, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFC0" - ], - [ - "gene_synonym", - "GeneID:946383" - ], - [ - "gene_synonym", - "EcoGene:EG11138" - ], - [ - "gene_synonym", - "JW1854" - ], - [ - "gene_synonym", - "ECK1866" - ], - [ - "gene_synonym", - "nudB" - ], - [ - "gene_synonym", - "ASAP:ABE-0006223" - ], - [ - "gene_synonym", - "orf17" - ], - [ - "gene_synonym", - "b1865" - ], - [ - "gene_synonym", - "NP_416379.1" - ], - [ - "gene_synonym", - "yebD" - ], - [ - "gene_synonym", - "ntpA" - ], - [ - "gene_synonym", - "GI:16129818" - ] - ], - "dna_sequence": "GTGAAGGATAAAGTGTATAAGCGTCCCGTTTCGATCTTAGTGGTCATCTACGCACAAGATACGAAACGGGTGCTGATGTTGCAGCGGCGTGACGATCCCGATTTCTGGCAGTCGGTAACCGGCAGCGTGGAAGAGGGTGAAACCGCGCCGCAAGCTGCCATGCGCGAAGTAAAGGAAGAGGTCACCATTGATGTTGTCGCTGAACAACTGACCTTAATTGACTGTCAGCGCACGGTAGAGTTTGAAATTTTTTCACATTTACGTCATCGCTATGCGCCGGGCGTGACGCGTAATACGGAATCATGGTTCTGTCTTGCGCTTCCGCACGAGCGGCAGATCGTTTTCACTGAACATCTGGCTTACAAGTGGCTTGATGCGCCTGCTGCGGCGGCGCTCACTAAGTCCTGGAGCAACCGGCAGGCGATTGAACAGTTTGTAATTAACGCTGCCTGA", - "dna_sequence_length": 453, - "functions": [ - "dihydroneopterin triphosphate pyrophosphatase" - ], - "id": "CDS_1858", - "location": [ - [ - "NC_000913", - 1948632, - "-", - 453 - ] - ], - "md5": "7575692ab65ebfb82b5d6ffdd12717ff", - "parent_gene": "", - "protein_md5": "b570a783ad52ac928a9761c83c08d9ad", - "protein_translation": "MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA", - "protein_translation_length": 150, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tls" - ], - [ - "gene_synonym", - "GeneID:946385" - ], - [ - "gene_synonym", - "ECK1867" - ], - [ - "gene_synonym", - "JW1855" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21889" - ], - [ - "gene_synonym", - "b1866" - ], - [ - "gene_synonym", - "NP_416380.1" - ], - [ - "gene_synonym", - "GI:16129819" - ], - [ - "gene_synonym", - "EcoGene:EG10097" - ], - [ - "gene_synonym", - "aspS" - ], - [ - "gene_synonym", - "ASAP:ABE-0006226" - ] - ], - "dna_sequence": "ATGCGTACAGAATATTGTGGACAGCTCCGTTTGTCCCACGTGGGGCAGCAGGTGACTCTGTGTGGTTGGGTCAACCGTCGTCGTGATCTTGGTAGCCTGATCTTCATCGATATGCGCGACCGCGAAGGTATCGTGCAGGTATTTTTCGATCCGGATCGTGCGGACGCGTTAAAGCTGGCCTCTGAACTGCGTAATGAGTTCTGCATTCAGGTCACGGGCACCGTACGTGCGCGTGACGAAAAAAATATTAACCGCGATATGGCGACCGGCGAAATCGAAGTGCTGGCGTCCTCGCTGACTATCATCAACCGCGCAGATGTTCTGCCGCTTGACTCTAACCACGTCAACACCGAAGAAGCGCGTCTGAAATACCGCTACCTCGACCTGCGTCGTCCGGAAATGGCTCAGCGCCTGAAAACCCGCGCTAAAATCACCAGCCTGGTGCGCCGTTTTATGGATGACCACGGCTTCCTCGACATCGAAACTCCGATGCTGACCAAAGCCACGCCGGAAGGCGCGCGTGACTACCTGGTGCCTTCTCGTGTGCACAAAGGTAAATTCTACGCACTGCCGCAATCCCCGCAGTTGTTCAAACAGCTGCTGATGATGTCCGGTTTTGACCGTTACTATCAGATCGTTAAATGCTTCCGTGACGAAGACCTGCGTGCTGACCGTCAGCCTGAATTTACTCAGATCGATGTGGAAACTTCTTTCATGACCGCGCCGCAAGTGCGTGAAGTGATGGAAGCGCTGGTGCGTCATCTGTGGCTGGAAGTGAAGGGTGTGGATCTGGGCGATTTCCCGGTAATGACCTTTGCGGAAGCAGAACGCCGTTATGGTTCTGATAAACCGGATCTGCGTAACCCGATGGAACTGACTGACGTTGCTGATCTGCTGAAATCTGTTGAGTTTGCTGTATTTGCAGGTCCGGCGAACGATCCGAAAGGTCGCGTAGCGGCTCTGCGCGTTCCGGGCGGCGCATCGCTGACCCGTAAGCAGATCGACGAATACGGTAACTTCGTTAAAATCTACGGCGCGAAAGGTCTGGCTTACATCAAAGTTAACGAACGCGCGAAAGGTCTGGAAGGTATCAACAGCCCGGTAGCGAAGTTCCTTAATGCAGAAATCATCGAAGACATCCTGGATCGTACTGCCGCGCAAGATGGCGATATGATTTTCTTCGGTGCCGACAACAAGAAAATTGTTGCCGACGCGATGGGTGCACTGCGCCTGAAAGTGGGTAAAGACCTTGGTCTGACCGACGAAAGCAAATGGGCACCGCTGTGGGTTATCGACTTCCCGATGTTTGAAGACGACGGTGAAGGCGGCCTGACGGCAATGCACCATCCGTTCACCTCACCGAAAGATATGACGGCTGCAGAACTGAAAGCTGCACCGGAAAATGCGGTGGCGAACGCTTACGATATGGTCATCAATGGTTACGAAGTGGGCGGTGGTTCAGTACGTATCCATAATGGTGATATGCAGCAGACGGTGTTTGGTATTCTGGGTATCAACGAAGAGGAACAGCGCGAGAAATTCGGCTTCCTGCTCGACGCTCTGAAATACGGTACTCCGCCGCACGCAGGTCTGGCATTCGGTCTTGACCGTCTGACCATGCTGCTGACCGGCACCGACAATATCCGTGACGTTATCGCCTTCCCGAAAACCACGGCGGCAGCGTGTCTGATGACTGAAGCACCGAGCTTTGCTAACCCGACTGCACTGGCTGAGCTGAGCATTCAGGTTGTGAAGAAGGCTGAGAATAACTGA", 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"gene_synonym", - "JW5307" - ], - [ - "gene_synonym", - "GeneID:946384" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADI7" - ], - [ - "gene_synonym", - "ECK1868" - ], - [ - "gene_synonym", - "GI:90111348" - ], - [ - "gene_synonym", - "b1867" - ], - [ - "gene_synonym", - "ASAP:ABE-0006231" - ], - [ - "gene_synonym", - "NP_416381.2" - ], - [ - "gene_synonym", - "EcoGene:EG12378" - ], - [ - "gene_synonym", - "yecD" - ] - ], - "dna_sequence": "ATGCTTGAACTTAATGCTAAAACCACTGCGCTGGTGGTGATCGATTTACAAGAAGGCATCTTACCTTTTGCCGGTGGTCCACATACTGCCGATGAGGTAGTTAATCGCGCCGGGAAGCTGGCGGCGAAATTTCGCGCCAGCGGTCAGCCCGTGTTTCTGGTGCGCGTTGGCTGGTCTGCCGATTACGCTGAAGCATTAAAACAGCCGGTCGATGCGCCCTCACCGGCTAAAGTGTTGCCCGAAAATTGGTGGCAACATCCTGCTGCATTAGGTGCAACCGACAGCGATATCGAAATCATCAAACGTCAATGGGGTGCGTTTTACGGTACGGATCTGGAGTTGCAATTACGCCGCCGAGGTATCGATACAATAGTGTTATGTGGGATCTCGACCAATATCGGTGTTGAATCCACCGCCCGCAATGCCTGGGAACTTGGCTTTAATCTGGTGATTGCCGAAGACGCCTGTAGTGCCGCCAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTGGAAGAGATCCTCAACGCGTTATGA", - "dna_sequence_length": 567, - "functions": [ - "isochorismatase family protein" - ], - "id": "CDS_1860", - "location": [ - [ - "NC_000913", - 1950832, - "+", - 567 - ] - ], - "md5": "4554ab8be217f9964a1470f3e12abf62", - "parent_gene": "", - "protein_md5": "9eb2861ceec31a7e766a83fa0a09eaa1", - "protein_translation": "MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSADYAEALKQPVDAPSPAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIARVRSVEEILNAL", - "protein_translation_length": 188, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416382.1" - ], - [ - "gene_synonym", - "JW1857" - ], - [ - "gene_synonym", - "ECK1869" - ], - [ - "gene_synonym", - "GeneID:946382" - ], - [ - "gene_synonym", - "ASAP:ABE-0006233" - ], - [ - "gene_synonym", - "EcoGene:EG12379" - ], - [ - "gene_synonym", - "GI:16129821" - ], - [ - "gene_synonym", - "yecE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37348" - ], - [ - "gene_synonym", - "b1868" - ] - ], - "dna_sequence": "ATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCGCCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGCCGAAACCCGAGGTTGTCCTGCGCTGGCGTGAGCAGACCACAGATGACTTCCGCTTCTGTTTTAAGTTTCCGGCGACCATTTCGCATCAGGCAGCATTACGGCATTGCGATGATTTAGTGACTGAATTTTTGACCCGCATGTCACCGTTGGCTCCGCGCATTGGGCAATACTGGCTGCAACTGCCTGCCACATTCGGCCCACGGGAGCTGCCTGCGCTTTGGCATTTTCTCGATTCTCTTCCTGGCGAATTTAATTATGGCGTGGAAGTCCGCCATCCACAGTTTTTCGCCAAAGGAGAAGAGGAACAAACGCTTAATCGCGGTTTACATCAGCGCGGCGTTAATCGGGTGATTTTAGACAGCCGCCCGGTTCATGCAGCACGTCCACACAGTGAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGTACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGTAGTGATGATATGACGCAAAACCGGGAATTATTTCAGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCTTTTTTTACATACGCCAGACATTGCCCAGGCACCGGAACTGGTACATACCCTGTGGGAAGACTTACGTAAAACGCTTCCAGAGATCGGAGCAGTTCCGGCTATTCCACAGCAATCTTCTCTTTTCTGA", - "dna_sequence_length": 819, - "functions": [ - "UPF0759 family protein" - ], - "id": "CDS_1861", - "location": [ - [ - "NC_000913", - 1951395, - "+", - 819 - ] - ], - "md5": "74b841ea260139c140d541b70b30d87b", - "parent_gene": "", - "protein_md5": "df6b66b597c319b1b3a983078adc63db", - "protein_translation": "MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKPEVVLRWREQTTDDFRFCFKFPATISHQAALRHCDDLVTEFLTRMSPLAPRIGQYWLQLPATFGPRELPALWHFLDSLPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNRVILDSRPVHAARPHSEAIRDAQRKKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQAPELVHTLWEDLRKTLPEIGAVPAIPQQSSLF", - "protein_translation_length": 272, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64515" - ], - [ - "gene_synonym", - "GeneID:946381" - ], - [ - "gene_synonym", - "NP_416383.4" - ], - [ - "gene_synonym", - "GI:90111349" - ], - [ - "gene_synonym", - "ECK1870" - ], - [ - "gene_synonym", - "JW5308" - ], - [ - "gene_synonym", - "ASAP:ABE-0006235" - ], - [ - "gene_synonym", - "yecN" - ], - [ - "gene_synonym", - "EcoGene:EG14032" - ], - [ - "gene_synonym", - "b1869" - ] - ], - "dna_sequence": "ATGGTAAGCGCGCTGTACGCCGTTTTAAGTGCGTTGTTATTAATGAAGTTCTCTTTTGATGTCGTTCGCCTGCGAATGCAGTACCGCGTTGCCTATGGCGACGGCGGTTTTAGCGAACTGCAAAGCGCTATTCGCATTCATGGTAACGCGGTGGAATATATTCCCATCGCGATTGTGCTGATGCTGTTTATGGAAATGAATGGCGCAGAAACCTGGATGGTGCATATTTGCGGCATCGTTTTGCTTGCTGGTCGTCTGATGCATTATTACGGTTTTCATCACCGTCTGTTCCGCTGGCGACGTTCCGGCATGAGCGCCACCTGGTGTGCGCTGTTGCTGATGGTGCTGGCGAATCTTTGGTATATGCCCTGGGAGTTGGTTTTCTCCCTGCGTTAG", - "dna_sequence_length": 396, - "functions": [ - "MAPEG family inner membrane protein" - ], - "id": "CDS_1862", - "location": [ - [ - "NC_000913", - 1952266, - "+", - 396 - ] - ], - "md5": "68b116c133849c5cf2774e2aef0efb72", - "parent_gene": "", - "protein_md5": "10bf2b136d7e76cf4539f28f5a1cddd6", - "protein_translation": "MVSALYAVLSALLLMKFSFDVVRLRMQYRVAYGDGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWELVFSLR", - "protein_translation_length": 131, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76290" - ], - [ - "gene_synonym", - "EcoGene:EG14033" - ], - [ - "gene_synonym", - "GeneID:946380" - ], - [ - "gene_synonym", - "JW1859" - ], - [ - "gene_synonym", - "cmoA" - ], - [ - "gene_synonym", - "ECK1871" - ], - [ - "gene_synonym", - "yecO" - ], - [ - "gene_synonym", - "ASAP:ABE-0006237" - ], - [ - "gene_synonym", - "NP_416384.1" - ], - [ - "gene_synonym", - "GI:16129823" - ], - [ - "gene_synonym", - "b1870" - ] - ], - "dna_sequence": "ATGTCTCACCGCGACACGCTATTTTCTGCCCCTATCGCCAGACTGGGCGACTGGACCTTTGATGAACGGGTAGCTGAAGTCTTCCCGGATATGATCCAGCGTTCCGTACCCGGCTATTCCAATATTATTTCCATGATTGGTATGTTAGCCGAGCGCTTCGTTCAACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCAGAGGACGCTGCATGA", - "dna_sequence_length": 744, - "functions": [ - "carboxy-SAM synthase" - ], - "id": "CDS_1863", - "location": [ - [ - "NC_000913", - 1952702, - "+", - 744 - ] - ], - "md5": "c0cac81479db8fea612eadbb1ee8c62d", - "parent_gene": "", - "protein_md5": "2f797d95255ffffa73bb6b3a93d50c05", - "protein_translation": "MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHNAGFEHSELWFQCFNFGSLVALKAEDAA", - "protein_translation_length": 247, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76291" - ], - [ - "gene_synonym", - "ASAP:ABE-0006241" - ], - [ - "gene_synonym", - "EcoGene:EG14034" - ], - [ - "gene_synonym", - "GeneID:946387" - ], - [ - "gene_synonym", - "NP_416385.1" - ], - [ - "gene_synonym", - "ECK1872" - ], - [ - "gene_synonym", - "yecP" - ], - [ - "gene_synonym", - "b1871" - ], - [ - "gene_synonym", - "JW1860" - ], - [ - "gene_synonym", - "cmoB" - ], - [ - "gene_synonym", - "GI:16129824" - ] - ], - "dna_sequence": "ATGATCGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATGCCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCGACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAA", - "dna_sequence_length": 972, - "functions": [ - "tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent" - ], - "id": "CDS_1864", - "location": [ - [ - "NC_000913", - 1953442, - "+", - 972 - ] - ], - "md5": "50a6a0c2e9d6fe561313c51d9100b891", - "parent_gene": "", - "protein_md5": "3677727fb049381a16204e8dbbc3db5e", - "protein_translation": "MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSNAVEFLPEIKPYRLDLLHSVTAESEEPLSAGQIKRIETLMRNLMPWRKGPFSLYGVNIDTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVPGDRYAQMRNVYFIPSALALKNWLKKCGFVDIRIADVSVTTTEEQRRTEWMVTESLADFLDPHDPGKTVEGYPAPKRAVLIARKP", - "protein_translation_length": 323, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416386.4" - ], - [ - "gene_synonym", - "GI:90111350" - ], - [ - "gene_synonym", - "bisZ" - ], - [ - "gene_synonym", - "GeneID:946389" - ], - [ - "gene_synonym", - "ECK1873" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46923" - ], - [ - "gene_synonym", - "b1872" - ], - [ - "gene_synonym", - "ASAP:ABE-0006244" - ], - [ - "gene_synonym", - "JW1861" - ], - [ - "gene_synonym", - "EcoGene:EG13276" - ], - [ - "gene_synonym", - "torZ" - ] - ], - "dna_sequence": "ATGACATTAACAAGACGTGAATTTATTAAACACAGCGGTATTGCCGCTGGAGCGCTGGTGGTGACATCGGCAGCACCGCTCCCCGCATGGGCAGAAGAGAAGGGCGGTAAAATCCTCACCGCGGGACGTTGGGGAGCGATGAACGTAGAAGTGAAGGACGGCAAGATTGTTTCTTCAACAGGCGCGCTGGCGAAAACCATACCGAATTCCTTACAGTCTACGGCGGCGGATCAGGTACACACCACGGCGCGTATTCAGCATCCGATGGTGAGAAAAAGCTATCTCGATAATCCACTGCAACCGGCGAAAGGTCGTGGCGAAGATACCTATGTACAGGTGAGCTGGGAACAGGCATTAAAACTGATTCATGAGCAACATGATCGTATTCGTAAAGCTAACGGACCATCGGCCATTTTTGCCGGATCTTACGGCTGGCGCTCTTCTGGCGTGTTGCATAAAGCGCAAACCTTACTGCAACGTTATATGAACCTGGCGGGCGGTTATTCCGGGCATAGCGGCGATTATTCAACCGGGGCAGCACAGGTGATCATGCCGCATGTGGTCGGTTCTGTAGAGGTGTATGAACAGCAGACCTCCTGGCCGCTGATTCTGGAAAACAGCCAGGTTGTGGTGCTGTGGGGAATGAACCCGCTGAATACCTTAAAAATTGCCTGGAGCAGTACCGATGAGCAAGGGCTGGAATACTTCCATCAGCTGAAAAAATCTGGCAAACCAGTGATTGCCATTGATCCTATCCGCTCCGAAACCATCGAATTCTTTGACGATAATGCCACCTGGATCGCGCCGAATATGGGCACCGACGTGGCACTGATGTTAGGGATTGCGCATACCCTGATGACACAAGGCAAACACGATAAAGTGTTCCTTGAAAAATACACTACCGGGTATCCGCAGTTTGAAGAGTATCTGACAGGTAAGAGCGATAATACGCCGAAGAGCGCGGTCTGGGCGGCGGAAATTACTGGCGTACCGGAAGCGCAGATAGTCAAACTCGCTGAACTGATGGCGGCGAATCGCACAATGCTGATGGCAGGCTGGGGAATTCAGCGCCAGCAATATGGTGAACAGAAACACTGGATGCTGGTGACGCTGGCGGCGATGTTAGGGCAGATTGGTACACCGGGCGGCGGTTTTGGTTTCTCTTATCATTACTCCAACGGTGGCAACCCGACGCGTGTTGGCGGCGTGCTGCCGGAAATGTCTGCGGCGATTGCCGGACATGCCAGCGAGGCCGCTGATGATGGCGGAATGACGGCGATTCCTGTTGCCCGTATCGTCGATGCGCTGGAAAATCCTGGCGGCAAATATCAGCATAACGGTAAAGAACAAACGTATCCGAATATCAAAATGATCTGGTGGGCGGGTGGCGGTAACTTTACCCATCACCAGGATACTAATCGTCTGATTAAAGCATGGCAGAAACCGGAGATGATCGTCGTTTCTGAATGCTACTGGACCGCAGCAGCCAAACACGCAGATATCGTATTACCGATCACCACATCGTTTGAGCGCAATGACTTGACGATGACCGGTGATTACAGCAACCAGCATATTGTGCCGATGAAGCAGGCTGTTGCTCCGCAATTTGAAGCGCGTAACGATTTTGACGTGTTTGCCGATCTTGCGGAATTACTCAAACCTGGCGGAAAAGAGATCTATACCGAAGGTAAAGATGAAATGGCGTGGCTGAAATTTTTCTATGATGCCGCTCAGAAAGGTGCCCGTGCGCAACGCGTCACTATGCCAATGTTTAATGCCTTCTGGCAGCAAAATAAACTGATCGAAATGCGCCACAGCGAGAAGAACGAACAGTACGTTCGTTATGGTGATTTCCGCGCCGATCCGGTGAAAAATGCGCTGGGTACGCCAAGCGGCAAAATTGAAATCTATTCAAAAACGTTGGAAAAATTTGGCTATAAGGATTGCCCGGCACACCCAACCTGGCTGGCTCCTGATGAATGGAAAGGTACCGCCGACGAGAAGCAGTTACAGCTTCTGACCGCACATCCGGCACACCGTTTACACAGTCAGCTTAACTATGCGGAACTGCGTAAAAAATATGCGATCGCCGATCGTGAACCAATCACTATTCACACCGAAGATGCTGCACGCTTTGGTATTGCGAATGGCGATCTGGTGCGTGTCTGGAACAAACGTGGTCAGATTTTGACAGGCGCGGTGGTGACTGACGGGATCAAAAAAGGCGTGGTATGCGTGCATGAAGGTGCATGGCCAGATCTGGAAAATGGCTTGTGTAAAAACGGCAGTGCGAACGTGTTAACGGCGGATATCCCCAGCTCGCAGCTGGCAAATGCCTGTGCCGGTAACTCAGCGTTGGTGTATATCGAAAAATATACGGGCAATGCACCGAAGTTAACGGCGTTTGATCAGCCAGCTGTTCAGGCGTAA", - "dna_sequence_length": 2430, - "functions": [ - "trimethylamine N-oxide reductase system III, catalytic subunit" - ], - "id": "CDS_1865", - "location": [ - [ - "NC_000913", - 1957007, - "-", - 2430 - ] - ], - "md5": "2fb0238f7d34ec5079abe33f2d8fccf9", - "parent_gene": "", - "protein_md5": "a6e63b4e3fd3a7255641f67add96144e", - "protein_translation": "MTLTRREFIKHSGIAAGALVVTSAAPLPAWAEEKGGKILTAGRWGAMNVEVKDGKIVSSTGALAKTIPNSLQSTAADQVHTTARIQHPMVRKSYLDNPLQPAKGRGEDTYVQVSWEQALKLIHEQHDRIRKANGPSAIFAGSYGWRSSGVLHKAQTLLQRYMNLAGGYSGHSGDYSTGAAQVIMPHVVGSVEVYEQQTSWPLILENSQVVVLWGMNPLNTLKIAWSSTDEQGLEYFHQLKKSGKPVIAIDPIRSETIEFFDDNATWIAPNMGTDVALMLGIAHTLMTQGKHDKVFLEKYTTGYPQFEEYLTGKSDNTPKSAVWAAEITGVPEAQIVKLAELMAANRTMLMAGWGIQRQQYGEQKHWMLVTLAAMLGQIGTPGGGFGFSYHYSNGGNPTRVGGVLPEMSAAIAGHASEAADDGGMTAIPVARIVDALENPGGKYQHNGKEQTYPNIKMIWWAGGGNFTHHQDTNRLIKAWQKPEMIVVSECYWTAAAKHADIVLPITTSFERNDLTMTGDYSNQHIVPMKQAVAPQFEARNDFDVFADLAELLKPGGKEIYTEGKDEMAWLKFFYDAAQKGARAQRVTMPMFNAFWQQNKLIEMRHSEKNEQYVRYGDFRADPVKNALGTPSGKIEIYSKTLEKFGYKDCPAHPTWLAPDEWKGTADEKQLQLLTAHPAHRLHSQLNYAELRKKYAIADREPITIHTEDAARFGIANGDLVRVWNKRGQILTGAVVTDGIKKGVVCVHEGAWPDLENGLCKNGSANVLTADIPSSQLANACAGNSALVYIEKYTGNAPKLTAFDQPAVQA", - "protein_translation_length": 809, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006246" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52005" - ], - [ - "gene_synonym", - "ECK1874" - ], - [ - "gene_synonym", - "GeneID:946490" - ], - [ - "gene_synonym", - "yecK" - ], - [ - "gene_synonym", - "b1873" - ], - [ - "gene_synonym", - "JW1862" - ], - [ - "gene_synonym", - "NP_416387.1" - ], - [ - "gene_synonym", - "torY" - ], - [ - "gene_synonym", - "EcoGene:EG13277" - ], - [ - "gene_synonym", - "GI:16129826" - ] - ], - "dna_sequence": "ATGCGAGGGAAAAAACGCATTGGGTTATTGTTTTTGCTGATAGCGGTTGTGGTTGGTGGCGGCGGGTTATTGCTGGCGCAAAAAGTCTTACATAAAACGTCGGATACAGCATTTTGCCTTTCCTGCCACTCGATGAGTAAACCTTTTGAGGAATATCAGGGAACTGTCCACTTTTCGAACCAGAAAGGGATACGTGCGGAATGTGCCGATTGCCATATTCCAAAGTCAGGGATGGATTATTTATTTGCTAAATTAAAGGCATCTAAAGATATTTATCATGAATTTGTTAGCGGCAAAATAGACAGTGACGATAAGTTCGAAGCTCATCGCCAGGAAATGGCCGAAACAGTATGGAAAGAATTAAAAGCCACTGACTCTGCAACGTGCCGTAGTTGCCATTCTTTTGATGCCATGGATATTGCCTCGCAAAGTGAATCTGCGCAGAAAATGCATAACAAAGCACAAAAGGACAGCGAAACCTGTATCGATTGTCATAAAGGCATTGCCCATTTTCCGCCAGAAATAAAAATGGATGACAACGCGGCGCATGAGCTGGAAAGTCAGGCCGCTACTTCAGTTACTAATGGCGCACATATTTATCCTTTCAAAACTTCTCACATAGGCGAGCTGGCTACCGTGAATCCTGGAACCGATCTCACCGTCGTTGATGCCAGTGGCAAACAGCCGATCGTTCTGTTGCAGGGTTATCAAATGCAGGGCAGTGAAAACACGCTCTACCTGGCGGCAGGTCAACGGCTGGCGCTAGCCACATTAAGTGAAGAAGGTATCAAGGCGCTCACTGTAAACGGGGAATGGCAGGCTGACGAATACGGCAATCAATGGCGTCAGGCGTCTTTACAGGGTGCGCTTACCGATCCCGCATTAGCGGACCGTAAACCGCTATGGCAATACGCTGAAAAACTTGACGATACCTATTGCGCTGGTTGTCATGCCCCTATTGCCGCCGACCATTACACCGTCAATGCGTGGCCGTCCATTGCCAAAGGAATGGGGGCACGAACCAGCATGAGCGAAAACGAACTGGACATTTTAACGCGGTATTTCCAGTACAACGCCAAAGATATTACCGAGAAACAGTGA", - "dna_sequence_length": 1101, - "functions": [ - "TMAO reductase III (TorYZ), cytochrome c-type subunit" - ], - "id": "CDS_1866", - "location": [ - [ - "NC_000913", - 1958132, - "-", - 1101 - ] - ], - "md5": "7c674e45f0fb469b4d89743e8e34eea1", - "parent_gene": "", - "protein_md5": "c53dd96c341b4419ac187a84128dbb5d", - "protein_translation": "MRGKKRIGLLFLLIAVVVGGGGLLLAQKVLHKTSDTAFCLSCHSMSKPFEEYQGTVHFSNQKGIRAECADCHIPKSGMDYLFAKLKASKDIYHEFVSGKIDSDDKFEAHRQEMAETVWKELKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKDSETCIDCHKGIAHFPPEIKMDDNAAHELESQAATSVTNGAHIYPFKTSHIGELATVNPGTDLTVVDASGKQPIVLLQGYQMQGSENTLYLAAGQRLALATLSEEGIKALTVNGEWQADEYGNQWRQASLQGALTDPALADRKPLWQYAEKLDDTYCAGCHAPIAADHYTVNAWPSIAKGMGARTSMSENELDILTRYFQYNAKDITEKQ", - "protein_translation_length": 366, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006252" - ], - [ - "gene_synonym", - "cutC" - ], - [ - "gene_synonym", - "GeneID:2847756" - ], - [ - "gene_synonym", - "EcoGene:EG12956" - ], - [ - "gene_synonym", - "ECK1875" - ], - [ - "gene_synonym", - "b1874" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67826" - ], - [ - "gene_synonym", - "dinY?" - ], - [ - "gene_synonym", - "YP_025309.2" - ], - [ - "gene_synonym", - "JW1863" - ], - [ - "gene_synonym", - "GI:90111351" - ] - ], - "dna_sequence": "ATGGCATTACTGGAAATTTGCTGTTACAGCATGGAATGTGCACTAACGGCGCAGCAAAACGGCGCAGACAGAGTTGAATTATGCGCAGCCCCAAAAGAGGGGGGCTTAACGCCGTCGTTGGGTGTACTGAAATCCGTGCGCCAGCGGGTGACGATCCCTGTGCATCCGATAATTCGCCCACGCGGTGGTGATTTTTGCTACAGCGACGGTGAGTTTGCCGCCATTCTTGAGGATGTGCGCACGGTCCGCGAATTAGGTTTTCCTGGACTGGTGACGGGCGTTCTCGATGTTGACGGGAATGTCGATATGCCACGAATGGAAAAAATAATGGCTGCTGCCGGTCCGCTGGCAGTGACTTTTCATCGCGCCTTCGATATGTGCGCTAACCCTTTATATACACTCAATAATCTTGCGGAATTGGGCATTGCCCGGGTACTGACATCAGGGCAAAAATCAGACGCACTGCAAGGTTTATCAAAAATTATGGAACTTATTGCCCATCGTGATGCTCCAATCATTATGGCCGGAGCAGGAGTCCGTGCAGAAAACCTGCACCACTTCCTCGATGCCGGAGTGCTGGAAGTCCATAGCTCCGCGGGAGCGTGGCAAGCCTCACCGATGCGTTATCGTAATCAAGGATTGTCCATGTCATCAGATGAACACGCGGACGAGTATTCGCGTTATATCGTAGACGGGGCGGCGGTTGCTGAAATGAAAGGAATCATTGAACGCCATCAGGCCAAATGA", - "dna_sequence_length": 747, - "functions": [ - "copper homeostasis protein" - ], - "id": "CDS_1867", - "location": [ - [ - "NC_000913", - 1959266, - "-", - 747 - ] - ], - "md5": "f7e5485bb29721e1e8f7ccd5c1387a0e", - "parent_gene": "", - "protein_md5": "8e74cfc2e1a9ce8f5b28b208f6ee2a77", - "protein_translation": "MALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSDALQGLSKIMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSAGAWQASPMRYRNQGLSMSSDEHADEYSRYIVDGAAVAEMKGIIERHQAK", - "protein_translation_length": 248, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946415" - ], - [ - "gene_synonym", - "ASAP:ABE-0006257" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52007" - ], - [ - "gene_synonym", - "ECK1876" - ], - [ - "gene_synonym", - "NP_416389.4" - ], - [ - "gene_synonym", - "JW5309" - ], - [ - "gene_synonym", - "b1875" - ], - [ - "gene_synonym", - "yecM" - ], - [ - "gene_synonym", - "yecL" - ], - [ - "gene_synonym", - "GI:90111352" - ], - [ - "gene_synonym", - "EcoGene:EG13405" - ] - ], - "dna_sequence": "ATGGCGAACTGGCAATCTATCGACGAGCTGCAGGATATTGCATCGGATTTACCGCGATTTATCCACGCATTAGATGAACTTTCCCGCCGTCTGGGGTTGAATATCACTCCGCTGACTGCCGATCACATTTCTTTGCGTTGCCATCAAAACGCCACTGCTGAACGCTGGCGTCGCGGGTTTGAACAGTGTGGCGAGCTTTTGTCAGAAAATATGATCAATGGCAGACCGATTTGTCTGTTTAAATTGCATGAACCGGTACAGGTTGCGCACTGGCAGTTTTCTATTGTGGAGCTACCGTGGCCCGGGGAAAAACGTTACCCACACGAAGGTTGGGAACATATTGAAATCGTTCTGCCGGGTGATCCAGAAACGCTGAATGCCCGTGCGCTGGCATTGCTTTCTGATGAAGGACTCAGCCTACCGGGGATCTCAGTGAAAACCAGTTCGCCAAAAGGTGAGCATGAGCGATTACCGAATCCGACGCTGGCGGTCACCGATGGCAAAACAACTATTAAGTTTCATCCGTGGTCCATTGAAGAGATCGTTGCCAGCGAGCAGTCGGCGTAA", - "dna_sequence_length": 567, - "functions": [ - "putative metal-binding enzyme" - ], - "id": "CDS_1868", - "location": [ - [ - "NC_000913", - 1959846, - "-", - 567 - ] - ], - "md5": "aa74def7aa7ab7a075635b748f00e31c", - "parent_gene": "", - "protein_md5": "c6005499c71d5bf8abf7535f429b54e9", - "protein_translation": "MANWQSIDELQDIASDLPRFIHALDELSRRLGLNITPLTADHISLRCHQNATAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPGEKRYPHEGWEHIEIVLPGDPETLNARALALLSDEGLSLPGISVKTSSPKGEHERLPNPTLAVTDGKTTIKFHPWSIEEIVASEQSA", - "protein_translation_length": 188, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10071" - ], - [ - "gene_synonym", - "ASAP:ABE-0006264" - ], - [ - "gene_synonym", - "GeneID:946452" - ], - [ - "gene_synonym", - "ECK1877" - ], - [ - "gene_synonym", - "argS" - ], - [ - "gene_synonym", - "GI:16129828" - ], - [ - "gene_synonym", - "b1876" - ], - [ - "gene_synonym", - "lov" - ], - [ - "gene_synonym", - "NP_416390.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11875" - ], - [ - "gene_synonym", - "JW1865" - ] - ], - "dna_sequence": "GTGAATATTCAGGCTCTTCTCTCAGAAAAAGTCCGTCAGGCCATGATTGCGGCAGGCGCGCCTGCGGATTGCGAACCGCAGGTTCGTCAGTCAGCAAAAGTTCAGTTCGGCGACTATCAGGCTAACGGCATGATGGCAGTTGCTAAAAAACTGGGTATGGCACCGCGACAATTAGCAGAGCAGGTGCTGACTCATCTGGATCTTAACGGTATCGCCAGCAAAGTTGAGATCGCCGGTCCAGGCTTTATCAACATTTTCCTTGATCCGGCATTCCTGGCTGAACATGTTCAGCAGGCGCTGGCGTCCGATCGTCTCGGTGTTGCTACGCCAGAAAAACAGACCATTGTGGTTGACTACTCTGCGCCAAACGTGGCGAAAGAGATGCATGTCGGTCACCTGCGCTCTACCATTATTGGTGACGCAGCAGTGCGTACTCTGGAGTTCCTCGGTCACAAAGTGATTCGCGCAAACCACGTCGGCGACTGGGGCACTCAGTTCGGTATGCTGATTGCATGGCTGGAAAAGCAGCAGCAGGAAAACGCCGGTGAAATGGAGCTGGCTGACCTTGAAGGTTTCTACCGCGATGCGAAAAAGCATTACGATGAAGATGAAGAGTTCGCCGAGCGCGCACGTAACTACGTGGTAAAACTGCAAAGCGGTGACGAATATTTCCGCGAGATGTGGCGCAAACTGGTCGACATCACCATGACGCAGAACCAGATCACCTACGATCGTCTCAACGTGACGCTGACCCGTGATGACGTGATGGGCGAAAGCCTCTACAACCCGATGCTGCCAGGAATTGTGGCGGATCTCAAAGCCAAAGGTCTGGCAGTAGAAAGCGAAGGGGCGACCGTCGTATTCCTTGATGAGTTTAAAAACAAGGAAGGCGAACCGATGGGCGTGATCATTCAGAAGAAAGATGGCGGCTATCTCTACACCACCACTGATATCGCCTGTGCGAAATATCGTTATGAAACACTGCATGCCGATCGCGTGCTGTATTACATCGACTCCCGTCAGCATCAACACCTGATGCAGGCATGGGCGATCGTCCGTAAAGCAGGCTATGTACCGGAATCCGTACCGCTGGAACACCACATGTTCGGCATGATGCTGGGTAAAGACGGCAAACCGTTCAAAACCCGCGCGGGTGGTACAGTGAAACTGGCCGATCTGCTGGATGAAGCCCTGGAACGTGCACGCCGTCTGGTGGCAGAAAAGAACCCGGATATGCCAGCCGACGAGCTGGAAAAACTGGCTAACGCGGTTGGTATTGGTGCGGTGAAATATGCGGATCTCTCCAAAAACCGCACCACGGACTACATCTTCGACTGGGACAACATGCTGGCGTTTGAGGGTAATACCGCGCCATACATGCAGTATGCATACACGCGTGTATTGTCCGTGTTCCGTAAAGCAGAAATTGACGAAGAGCAACTGGCTGCAGCTCCGGTTATCATCCGTGAAGATCGTGAAGCGCAACTGGCAGCTCGCCTGCTGCAGTTTGAAGAAACCCTCACCGTGGTTGCCCGTGAAGGCACGCCGCATGTAATGTGTGCTTACCTGTACGATCTGGCCGGTCTGTTCTCTGGCTTCTACGAGCACTGCCCGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAA", 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"NP_416391.4" - ], - [ - "gene_synonym", - "ECK1878" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76296" - ], - [ - "gene_synonym", - "yecT" - ], - [ - "gene_synonym", - "ASAP:ABE-0006268" - ], - [ - "gene_synonym", - "GI:90111353" - ], - [ - "gene_synonym", - "b1877" - ], - [ - "gene_synonym", - "JW5310" - ], - [ - "gene_synonym", - "GeneID:946511" - ], - [ - "gene_synonym", - "EcoGene:EG14316" - ] - ], - "dna_sequence": "GTGTTTAAATTTCTTGTATTAACATTAGGCATTATCTCTTGCCAGGCTTACGCAGAAGATACGGTTATAGTAAACGACCATGACATTTCAGCCATCAAAGATTGTTGGCAAAAAAATTCAGATGATGATACTGACGTTAACGTGATCAAATCATGCCTGCGACAAGAATACAATCTCGTCGATGCGCAATTAAATAAAGCCTATGGTGAAGCTTATCGTTATATAGAACAAGTGCCACGCACAGGTGTAAAAAAACCTGATACCGAACAACTTAACTTGCTTAAAAAATCACAGCGAGCCTGGCTGGATTTTAGGGACAAAGAATGTGAATTAATCCTTTCAAATGAGGACGTTCAGGATTTAAGTGACCCTTATTCTGAATCAGAATGGCTCTCATGTATGATCATACAGACCAATACGCGAACTCGCCAGTTGCAGCTATACCGTAACTCTGAAGATTTTTATCCAAGCCCTTTGACAAGAGGATAA", - "dna_sequence_length": 489, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1870", - "location": [ - [ - "NC_000913", - 1961972, - "+", - 489 - ] - ], - "md5": "933d8e7b5099893781c34b0fd0eee3c0", - "parent_gene": "", - "protein_md5": "7bde97feb52c72e7f094e217275ffd5f", - "protein_translation": "MFKFLVLTLGIISCQAYAEDTVIVNDHDISAIKDCWQKNSDDDTDVNVIKSCLRQEYNLVDAQLNKAYGEAYRYIEQVPRTGVKKPDTEQLNLLKKSQRAWLDFRDKECELILSNEDVQDLSDPYSESEWLSCMIIQTNTRTRQLQLYRNSEDFYPSPLTRG", - "protein_translation_length": 162, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14013" - ], - [ - "gene_synonym", - "GeneID:946094" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76297" - ], - [ - "gene_synonym", - "ECK1879" - ], - [ - "gene_synonym", - "NP_416392.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006270" - ], - [ - "gene_synonym", - "JW1867" - ], - [ - "gene_synonym", - "flhE" - ], - [ - "gene_synonym", - "GI:16129830" - ], - [ - "gene_synonym", - "b1878" - ] - ], - "dna_sequence": "ATGAGAACCTTATTAGCAATATTATTGTTTCCGCTGCTGGTGCAAGCCGCCGGGGAGGGGATGTGGCAGGCAAGTAGTGTAGGAATTACGCTAAATCATCGCGGTGAGTCGATGTCGTCTGCGCCTCTTTCTACGCGACAACCTGCTTCAGGATTGATGACGCTGGTAGCGTGGCGTTATCAGCTTATCGGCCCGACACCTTCAGGACTGCGGGTTCGCTTGTGTTCGCAATCTCGTTGTGTCGAATTAGAGGGGCAGAGCGGAACCACCGTGGCCTTTTCCGGTATAGCGGCAGCAGAACCGTTGCGATTTATCTGGGAAGTGCCAGGCGGTGGGCGGTTAATTCCACCGCTAAAGGTACAACGTAATGAAGTGATTGTGAATTATCGCTGA", - "dna_sequence_length": 393, - "functions": [ - "proton seal during flagellar secretion" - ], - "id": "CDS_1871", - "location": [ - [ - "NC_000913", - 1962972, - "-", - 393 - ] - ], - "md5": "36c1439be594639e005faba8446e3fe0", - "parent_gene": "", - "protein_md5": "9d16631fabd7e8200bfe24e3aa1521be", - "protein_translation": "MRTLLAILLFPLLVQAAGEGMWQASSVGITLNHRGESMSSAPLSTRQPASGLMTLVAWRYQLIGPTPSGLRVRLCSQSRCVELEGQSGTTVAFSGIAAAEPLRFIWEVPGGGRLIPPLKVQRNEVIVNYR", - "protein_translation_length": 130, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946390" - ], - [ - "gene_synonym", - "ECK1880" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76298" - ], - [ - "gene_synonym", - "ASAP:ABE-0006272" - ], - [ - "gene_synonym", - "EcoGene:EG14273" - ], - [ - "gene_synonym", - "JW1868" - ], - [ - "gene_synonym", - "flhA" - ], - [ - "gene_synonym", - "NP_416393.1" - ], - [ - "gene_synonym", - "GI:16129831" - ], - [ - "gene_synonym", - "b1879" - ], - [ - "gene_synonym", - "flaH" - ] - ], - "dna_sequence": "ATGAGTAATCTGGCCGCGATGCTGCGCCTGCCCGCAAACCTGAAATCGACACAATGGCAGATCCTTGCCGGACCGATTTTGATCCTGTTGATCTTGTCGATGATGGTGCTGCCACTGCCCGCATTCATACTCGACCTGTTGTTTACCTTCAATATTGCCTTGTCGATCATGGTGTTGCTGGTGGCGATGTTTACCCAGCGCACGCTTGAGTTTGCTGCGTTTCCGACCATTCTGTTGTTTACCACGCTGTTGCGTCTGGCACTTAACGTGGCTTCAACCCGTATCATTTTAATGGAAGGGCATACCGGCGCGGCGGCGGCAGGGAAGGTGGTCGAAGCGTTCGGTCACTTCCTCGTTGGTGGCAATTTCGCTATCGGTATCGTGGTGTTTGTCATTCTCGTGATCATCAACTTTATGGTCATTACCAAAGGTGCCGGGCGTATCGCAGAAGTGGGTGCGCGCTTTGTTCTCGATGGTATGCCGGGTAAGCAGATGGCGATTGACGCCGACCTTAACGCCGGATTGATTGGTGAAGATGAGGCGAAAAAACGCCGCTCCGAAGTGACTCAGGAAGCCGATTTTTACGGCTCAATGGACGGGGCAAGTAAGTTTGTTCGCGGCGATGCCATCGCCGGGATCCTCATCATGGTCATTAACATTGTCGGCGGGTTGCTGGTCGGCGTGCTGCAACATGGCATGAGCATGGGACACGCGGCGGAAAGTTATACGCTATTGACCATTGGCGACGGTCTGGTGGCACAAATTCCGGCGCTGGTGATTTCTACCGCCGCGGGGGTCATCGTTACGCGTGTCAGCACCGATCAGGATGTTGGCGAGCAGATGGTGAATCAGCTTTTCAGTAACCCAAGCGTTATGTTGTTAAGCGCCGCCGTGCTCGGTTTACTCGGCCTGGTGCCTGGAATGCCGAACCTGGTATTTTTGCTGTTCACTGCCGGATTGCTCGGGCTGGCCTGGTGGATACGCGGACGCGAACAAAAAGCGCCTGCCGAACCCAAACCGGTAAAAATGGCAGAGAATAATACCGTTGTCGAAGCGACGTGGAACGATGTACAACTGGAAGATTCTCTGGGAATGGAAGTGGGTTATCGACTGATCCCGATGGTCGATTTCCAGCAGGATGGTGAGTTGTTGGGCCGTATACGCAGTATCCGCAAGAAATTTGCCCAGGAGATGGGATTTCTGCCGCCAGTGGTGCACATTCGCGACAATATGGATCTGCAACCTGCCCGCTATCGCATTTTGATGAAAGGCGTGGAGATTGGCAGTGGTGATGCTTATCCGGGGCGCTGGCTGGCGATTAACCCTGGAACCGCTGCCGGGACGTTACCTGGTGAGGCGACCGTCGATCCGGCATTTGGCCTGAATGCTATCTGGATTGAAAGTGCGCTAAAAGAACAGGCGCAGATTCAGGGGTACACAGTGGTTGAGGCCAGCACGGTGGTAGCAACGCATCTTAACCACCTCATTAGCCAGCATGCCGCAGAGCTGTTTGGTCGTCAGGAGGCGCAACAGCTGTTGGATCGCGTCGCCCAGGAGATGCCAAAGCTGACGGAAGATCTCGTTCCTGGCGTCGTCACGCTCACCACACTGCATAAAGTGCTGCAAAATCTCCTCGATGAAAAAGTACCGATTCGCGATATGCGCACCATTCTCGAAACGCTGGCGGAACATGCGCCCATCCAAAGCGATCCACATGAATTAACCGCCGTCGTGCGCGTGGCGTTGGGACGGGCGATTACCCAGCAGTGGTTTCCTGGCAAAGATGAAGTCCATGTTATTGGCCTCGATACACCGCTGGAACGTTTGTTACTACAGGCGCTGCAGGGCGGGGGAGGACTGGAGCCAGGGCTGGCGGATCGTTTACTGGCGCAAACTCAGGAAGCGCTATCCCGTCAGGAGATGCTGGGTGCGCCGCCAGTATTGTTGGTGAACCACGCGCTGCGACCATTATTGTCTCGCTTCCTGCGCCGCAGCTTGCCGCAGTTAGTGGTCCTGTCGAATCTGGAACTGTCTGATAACCGACATATCCGCATGACGGCGACAATTGGCGGCAAATAA", - "dna_sequence_length": 2079, - "functions": [ - "putative flagellar export pore protein" - ], - "id": "CDS_1872", - "location": [ - [ - "NC_000913", - 1965050, - "-", - 2079 - ] - ], - "md5": "88454fa79e60c53300cd16ef680c3591", - "parent_gene": "", - "protein_md5": "925b09076802fc2be6a36392faae79ea", - "protein_translation": "MSNLAAMLRLPANLKSTQWQILAGPILILLILSMMVLPLPAFILDLLFTFNIALSIMVLLVAMFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHTGAAAAGKVVEAFGHFLVGGNFAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVINIVGGLLVGVLQHGMSMGHAAESYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQDVGEQMVNQLFSNPSVMLLSAAVLGLLGLVPGMPNLVFLLFTAGLLGLAWWIRGREQKAPAEPKPVKMAENNTVVEATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELLGRIRSIRKKFAQEMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWLAINPGTAAGTLPGEATVDPAFGLNAIWIESALKEQAQIQGYTVVEASTVVATHLNHLISQHAAELFGRQEAQQLLDRVAQEMPKLTEDLVPGVVTLTTLHKVLQNLLDEKVPIRDMRTILETLAEHAPIQSDPHELTAVVRVALGRAITQQWFPGKDEVHVIGLDTPLERLLLQALQGGGGLEPGLADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSRFLRRSLPQLVVLSNLELSDNRHIRMTATIGGK", - "protein_translation_length": 692, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1881" - ], - [ - "gene_synonym", - "GeneID:946391" - ], - [ - "gene_synonym", - "EcoGene:EG14035" - ], - [ - "gene_synonym", - "NP_416394.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76299" - ], - [ - "gene_synonym", - "ASAP:ABE-0006275" - ], - [ - "gene_synonym", - "yecQ" - ], - [ - "gene_synonym", - "flhB" - ], - [ - "gene_synonym", - "flaG" - ], - [ - "gene_synonym", - "JW1869" - ], - [ - "gene_synonym", - "b1880" - ], - [ - "gene_synonym", - "GI:16129832" - ] - ], - "dna_sequence": "GTGTCTGACGAGAGCGACGACAAAACAGAAGCCCCCACACCTCACCGACTAGAAAAAGCGCGGGAAGAGGGGCAAATCCCGCGTTCCCGTGAACTGACCTCACTGCTGATTTTGCTGGTGGGCGTTAGTGTTATCTGGTTTGGCGGTGTGTCGCTGGCCCGTCGATTGTCGGGCATGCTCTCCGCTGGGCTGCATTTTGATCACAGTATTATCAATGACCCGAATCTGATCCTCGGGCAGATTATTCTGCTGATCAGAGAAGCCATGCTGGCGCTGCTGCCGCTGATTAGCGGCGTGGTGCTGGTGGCGCTCATTTCTCCGGTCATGCTGGGAGGGCTGGTATTTAGCGGCAAATCCTTGCAGCCGAAGTTTTCCAAACTCAACCCGCTACCGGGCATTAAACGGATGTTCTCGGCTCAGACTGGCGCGGAGTTGCTTAAAGCAATTTTGAAAACCATCCTGGTTGGCAGCGTGACGGGGTTTTTTCTCTGGCATCACTGGCCGCAGATGATGCGCTTGATGGCCGAGTCTCCGATTACCGCCATGGGTAATGCGATGGATTTGGTAGGGCTATGCGCACTGCTGGTGGTGCTTGGTGTCATTCCAATGGTGGGATTTGACGTCTTTTTCCAAATATTCAGCCACCTGAAAAAGCTGCGTATGTCACGGCAGGATATTCGTGATGAGTTCAAACAAAGCGAAGGTGACCCTCATGTTAAAGGGCGGATCCGTCAGATGCAGCGAGCTGCTGCACGGCGTCGGATGATGGCCGATGTGCCGAAAGCGGATGTCATTGTCAATAACCCGACCCACTATTCGGTAGCGTTGCAGTATGACGAAAACAAAATGAGCGCACCGAAAGTGGTCGCTAAAGGTGCAGGGCTGGTCGCGCTGCGCATTCGTGAAATTGGCGCTGAAAATAACGTCCCGACGCTTGAAGCGCCGCCGCTGGCGCGAGCGCTGTATCGACATGCGGAGATTGGTCAACAAATCCCGGGTCAACTGTACGCCGCGGTGGCGGAAGTGCTGGCCTGGGTCTGGCAACTGAAACGCTGGCGTCTGGCTGGTGGACAGCGCCCTGTACAACCTACTCATCTTCCGGTGCCGGAAGCCCTGGATTTTATTAACGAGAAACCGACCCATGAGTAA", - "dna_sequence_length": 1149, - "functions": [ - "flagellin export apparatus, substrate specificity protein" - ], - "id": "CDS_1873", - "location": [ - [ - "NC_000913", - 1966191, - "-", - 1149 - ] - ], - "md5": "f9b9981bc43ec1c9429156e1f25700c4", - "parent_gene": "", - "protein_md5": "d54f7a96ccfa05cc547e68f062f87d1a", - "protein_translation": "MSDESDDKTEAPTPHRLEKAREEGQIPRSRELTSLLILLVGVSVIWFGGVSLARRLSGMLSAGLHFDHSIINDPNLILGQIILLIREAMLALLPLISGVVLVALISPVMLGGLVFSGKSLQPKFSKLNPLPGIKRMFSAQTGAELLKAILKTILVGSVTGFFLWHHWPQMMRLMAESPITAMGNAMDLVGLCALLVVLGVIPMVGFDVFFQIFSHLKKLRMSRQDIRDEFKQSEGDPHVKGRIRQMQRAAARRRMMADVPKADVIVNNPTHYSVALQYDENKMSAPKVVAKGAGLVALRIREIGAENNVPTLEAPPLARALYRHAEIGQQIPGQLYAAVAEVLAWVWQLKRWRLAGGQRPVQPTHLPVPEALDFINEKPTHE", - "protein_translation_length": 382, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946392" - ], - [ - "gene_synonym", - "ECK1882" - ], - [ - "gene_synonym", - "NP_416395.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006278" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9H9" - ], - [ - "gene_synonym", - "cheZ" - ], - [ - "gene_synonym", - "EcoGene:EG10151" - ], - [ - "gene_synonym", - "b1881" - ], - [ - "gene_synonym", - "GI:16129833" - ], - [ - "gene_synonym", - "JW1870" - ] - ], - "dna_sequence": "ATGATGCAACCATCAATCAAACCTGCTGACGAGCATTCAGCTGGCGATATCATTGCGCGCATCGGCAGCCTGACGCGTATGCTGCGCGACAGTTTGCGGGAACTGGGGCTGGATCAGGCCATTGCCGAAGCGGCGGAAGCCATCCCCGATGCGCGCGATCGTTTGTACTATGTTGTGCAGATGACCGCCCAGGCTGCGGAGCGGGCGCTGAACAGTGTTGAGGCGTCACAACCGCATCAGGATCAAATGGAGAAATCAGCAAAAGCGTTAACCCAACGTTGGGATGACTGGTTTGCCGATCCGATTGACCTTGCCGACGCCCGTGAACTGGTAACAGATACACGACAATTTCTGGCAGATGTACCCGCGCATACCAGCTTTACTAACGCGCAACTGCTGGAAATCATGATGGCGCAGGATTTTCAGGATCTCACCGGGCAGGTCATTAAGCGGATGATGGATGTCATTCAGGAGATCGAACGCCAGTTGCTGATGGTGCTGTTGGAAAACATCCCGGAACAGGAGTCGCGTCCAAAACGTGAAAACCAGAGTTTGCTTAATGGACCTCAGGTCGATACCAGCAAAGCCGGTGTGGTAGCCAGTCAGGATCAGGTGGACGATTTGTTGGATAGTCTTGGATTTTGA", - "dna_sequence_length": 645, - "functions": [ - "chemotaxis regulator, protein phosphatase for CheY" - ], - "id": "CDS_1874", - "location": [ - [ - "NC_000913", - 1967037, - "-", - 645 - ] - ], - "md5": "e36c8a368928555bda53d1299998a1d6", - "parent_gene": "", - "protein_md5": "2743f67b48ad68f4b8bd3b756683bfac", - "protein_translation": "MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEAAEAIPDARDRLYYVVQMTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFADPIDLADARELVTDTRQFLADVPAHTSFTNAQLLEIMMAQDFQDLTGQVIKRMMDVIQEIERQLLMVLLENIPEQESRPKRENQSLLNGPQVDTSKAGVVASQDQVDDLLDSLGF", - "protein_translation_length": 214, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1883" - ], - [ - "gene_synonym", - "GeneID:946393" - ], - [ - "gene_synonym", - "ASAP:ABE-0006280" - ], - [ - "gene_synonym", - "cheY" - ], - [ - "gene_synonym", - "EcoGene:EG10150" - ], - [ - "gene_synonym", - "NP_416396.1" - ], - [ - "gene_synonym", - "JW1871" - ], - [ - "gene_synonym", - "b1882" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE67" - ], - [ - "gene_synonym", - "GI:16129834" - ] - ], - "dna_sequence": "ATGGCGGATAAAGAACTTAAATTTTTGGTTGTGGATGACTTTTCCACCATGCGACGCATAGTGCGTAACCTGCTGAAAGAGCTGGGATTCAATAATGTTGAGGAAGCGGAAGATGGCGTCGACGCTCTCAATAAGTTGCAGGCAGGCGGTTATGGATTTGTTATCTCCGACTGGAACATGCCCAATATGGATGGCCTGGAATTGCTGAAAACAATTCGTGCGGATGGCGCGATGTCGGCATTGCCAGTGTTAATGGTGACTGCAGAAGCGAAGAAAGAGAACATCATTGCTGCGGCGCAAGCGGGGGCCAGTGGCTATGTGGTGAAGCCATTTACCGCCGCGACGCTGGAGGAAAAACTCAACAAAATCTTTGAGAAACTGGGCATGTGA", - "dna_sequence_length": 390, - "functions": [ - "chemotaxis regulator transmitting signal to flagellar motor component" - ], - "id": "CDS_1875", - "location": [ - [ - "NC_000913", - 1967437, - "-", - 390 - ] - ], - "md5": "3f56faab576b55e2488cd227f4c2b63d", - "parent_gene": "", - "protein_md5": "308c2c704e7f4631f2bcb6223796b8cb", - "protein_translation": "MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKLGM", - "protein_translation_length": 129, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006284" - ], - [ - "gene_synonym", - "b1883" - ], - [ - "gene_synonym", - "GeneID:946394" - ], - [ - "gene_synonym", - "ECK1884" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07330" - ], - [ - "gene_synonym", - "NP_416397.1" - ], - [ - "gene_synonym", - "EcoGene:EG10147" - ], - [ - "gene_synonym", - "cheB" - ], - [ - "gene_synonym", - "JW1872" - ], - [ - "gene_synonym", - "GI:16129835" - ] - ], - "dna_sequence": "ATGAGCAAAATCAGGGTGTTATCTGTCGATGATTCGGCACTGATGCGCCAGATCATGACAGAAATCATCAACAGCCATAGCGACATGGAAATGGTGGCGACCGCGCCTGATCCGCTGGTCGCGCGTGACTTGATTAAGAAATTCAATCCCGATGTGCTGACGCTGGATGTTGAAATGCCGCGGATGGACGGACTGGATTTCCTCGAAAAATTAATGCGTTTGCGTCCAATGCCCGTTGTGATGGTTTCTTCCCTGACCGGCAAAGGGTCAGAAGTCACGCTGCGCGCGCTGGAGCTGGGGGCGATAGATTTTGTCACCAAACCGCAACTGGGTATTCGCGAAGGTATGCTGGCGTATAACGAAATGATTGCTGAAAAGGTGCGTACGGCAGCAAAGGCGAGCCTTGCAGCACATAAGCCATTGTCGGCACCGACAACGCTGAAGGCGGGGCCGTTGTTGAGTTCTGAAAAACTGATTGCGATTGGTGCTTCAACGGGTGGAACTGAGGCAATTCGTCACGTACTGCAACCGTTGCCGCTTTCCAGCCCGGCACTGTTAATTACCCAGCATATGCCGCCCGGTTTCACCCGCTCTTTTGCCGACAGACTTAATAAGCTTTGCCAGATCGGGGTTAAAGAAGCCGAAGACGGAGAACGTGTCTTGCCGGGGCATGCCTATATTGCGCCGGGCGATCGGCATATGGAGCTGTCGCGTAGTGGCGCAAATTACCAAATCAAAATTCACGATGGCCCGGCGGTTAACCGTCATCGGCCTTCGGTAGATGTGTTGTTCCATTCTGTCGCCAAACAGGCGGGGCGTAATGCGGTTGGGGTGATCCTGACCGGTATGGGCAACGACGGCGCGGCGGGAATGTTGGCGATGCGTCAGGCGGGGGCATGGACCCTTGCGCAAAACGAAGCAAGTTGCGTGGTGTTCGGCATGCCGCGCGAGGCCATCAATATGGGTGGTGTCTGCGAAGTGGTCGATCTTAGCCAGGTAAGCCAGCAAATGTTGGCAAAAATTAGTGCCGGACAGGCGATACGTATTTAA", - "dna_sequence_length": 1050, - "functions": [ - "fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA" - ], - "id": "CDS_1876", - "location": [ - [ - "NC_000913", - 1968501, - "-", - 1050 - ] - ], - "md5": "db98bd5c1862c43e2145fe3fe64cf2db", - "parent_gene": "", - "protein_md5": "df128e8a2b34ea67f9c394b8f56f89dc", - "protein_translation": "MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDLIKKFNPDVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAIDFVTKPQLGIREGMLAYNEMIAEKVRTAAKASLAAHKPLSAPTTLKAGPLLSSEKLIAIGASTGGTEAIRHVLQPLPLSSPALLITQHMPPGFTRSFADRLNKLCQIGVKEAEDGERVLPGHAYIAPGDRHMELSRSGANYQIKIHDGPAVNRHRPSVDVLFHSVAKQAGRNAVGVILTGMGNDGAAGMLAMRQAGAWTLAQNEASCVVFGMPREAINMGGVCEVVDLSQVSQQMLAKISAGQAIRI", - "protein_translation_length": 349, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006286" - ], - [ - "gene_synonym", - "cheR" - ], - [ - "gene_synonym", - "ECK1885" - ], - [ - "gene_synonym", - "cheX" - ], - [ - "gene_synonym", - "EcoGene:EG10148" - ], - [ - "gene_synonym", - "NP_416398.1" - ], - [ - "gene_synonym", - "GeneID:946396" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07364" - ], - [ - "gene_synonym", - "JW1873" - ], - [ - "gene_synonym", - "b1884" - ], - [ - "gene_synonym", - "GI:16129836" - ] - ], - "dna_sequence": "ATGACTTCATCTCTGCCCTGTGGGCAAACGTCTTTATTGTTACAGATGACCGAGCGCCTGGCGCTTTCCGACGCGCATTTTCGGCGGATAAGTCAATTGATCTATCAACGAGCCGGGATCGTTCTGGCTGACCATAAACGCGACATGGTTTACAACCGACTGGTTCGTCGTTTGCGTTCGCTGGGACTGACGGATTTCGGTCATTATCTGAACTTGCTGGAATCTAATCAGCACAGCGGTGAGTGGCAGGCGTTTATCAATTCGCTGACCACGAATCTGACGGCATTTTTCCGTGAGGCACATCATTTCCCTCTGCTCGCGGATCACGCACGTCGCCGTTCTGGCGAGTATCGCGTATGGAGCGCGGCGGCTTCGACCGGCGAAGAGCCGTACAGCATTGCGATGACGCTGGCTGACACATTGGGCACCGCGCCCGGACGCTGGAAAGTGTTTGCCAGTGATATCGACACCGAAGTGCTGGAAAAAGCCAGAAGCGGTATCTATCGCCATGAAGAGTTGAAAAACCTGACGCCGCAGCAACTGCAACGGTATTTCATGCGAGGGACGGGGCCGCATGAAGGGCTGGTACGCGTGCGTCAGGAGCTGGCGAACTATGTTGATTTTGCCCCGCTGAATCTACTGGCGAAACAGTACACCGTGCCGGGGCCGTTTGATGCGATCTTCTGTCGTAACGTCATGATCTACTTCGATCAAACTACCCAGCAGGAGATTTTGCGCCGCTTTGTTCCGCTCCTTAAACCCGACGGATTGCTGTTTGCGGGTCACTCTGAAAACTTTAGCCACCTTGAGCGCCGCTTCACGCTGCGTGGTCAGACGGTGTATGCGCTAAGTAAGGATTAA", - "dna_sequence_length": 861, - "functions": [ - "chemotaxis regulator, protein-glutamate methyltransferase" - ], - "id": "CDS_1877", - "location": [ - [ - "NC_000913", - 1969364, - "-", - 861 - ] - ], - "md5": "266d72bbd563c24b0f8427abc4eaf8ba", - "parent_gene": "", - "protein_md5": "6f6f430ab9ea53e7d08bd8bd496919f3", - "protein_translation": "MTSSLPCGQTSLLLQMTERLALSDAHFRRISQLIYQRAGIVLADHKRDMVYNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHHFPLLADHARRRSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNLTPQQLQRYFMRGTGPHEGLVRVRQELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMIYFDQTTQQEILRRFVPLLKPDGLLFAGHSENFSHLERRFTLRGQTVYALSKD", - "protein_translation_length": 286, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tap" - ], - [ - "gene_synonym", - "ECK1886" - ], - [ - "gene_synonym", - "ASAP:ABE-0006288" - ], - [ - "gene_synonym", - "b1885" - ], - [ - "gene_synonym", - "GeneID:946397" - ], - [ - "gene_synonym", - "EcoGene:EG10987" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07018" - ], - [ - "gene_synonym", - "GI:16129837" - ], - [ - "gene_synonym", - "JW1874" - ], - [ - "gene_synonym", - "NP_416399.1" - ] - ], - "dna_sequence": "ATGTTTAATCGTATTCGAATTTCGACCACGCTGTTTTTAATTTTGATTCTCTGCGGGATCTTGCAGATTGGCAGTAACGGCATGTCTTTTTGGGCATTTCGCGACGATTTGCAACGACTGAATCAGGTCGAGCAGAGCAATCAGCAACGTGCGGCATTAGCGCAAACTCGGGCGGTAATGTTACAGGCCAGTACCGCGCTGAACAAAGCGGGCACTCTGACGGCACTTAGCTATCCGGCGGATGACATTAAAACGTTGATGACGACGGCGCGCGCCAGTCTGACGCAATCCACCACGCTGTTTAAAAGTTTTATGGCGATGACTGCGGGCAACGAGCACGTCAGGGGATTGCAAAAAGAGACGGAGAAAAGTTTTGCCCGCTGGCACAACGATCTCGAACATCAGGCGACCTGGCTTGAAAGTAATCAACTTTCGGATTTCCTCACTGCGCCGGTGCAGGGATCACAGAATGCGTTTGACGTTAACTTTGAGGCCTGGCAGCTGGAGATCAACCATGTGCTGGAAGCCGCCAGTGCGCAAAGCCAGCGTAACTATCAGATTTCGGCACTGGTGTTTATCAGCATGATTATTGTTGCGGCGATCTACATCAGCAGTGCGCTGTGGTGGACGCGCAAGATGATTGTTCAACCACTGGCCATTATCGGTAGCCATTTTGACAGCATTGCTGCGGGTAATCTGGCGCGTCCGATTGCGGTATATGGTCGTAATGAGATCACCGCCATTTTTGCCAGTCTGAAGACCATGCAGCAGGCTTTGCGTGGGACGGTAAGTGATGTGCGTAAGGGAAGCCAGGAGATGCACATTGGTATCGCGGAGATTGTCGCAGGCAATAACGATCTCTCAAGTCGTACCGAACAGCAGGCGGCATCGCTGGCACAAACGGCCGCCAGTATGGAGCAATTAACCGCCACGGTAGGGCAAAACGCCGATAACGCACGACAGGCGTCGGAACTGGCAAAAAATGCCGCGACAACGGCGCAGGCGGGCGGTGTTCAGGTCAGTACCATGACTCACACCATGCAGGAGATCGCCACCAGCTCGCAAAAAATTGGCGACATTATCAGCGTTATCGACGGAATTGCTTTCCAGACCAATATTCTGGCCCTGAATGCGGCAGTGGAAGCGGCTCGCGCCGGAGAGCAGGGGCGTGGTTTTGCGGTAGTGGCAGGTGAAGTGCGCAATCTTGCCAGCCGTAGCGCGCAGGCAGCAAAAGAGATCAAAGGGCTGATCGAAGAGTCAGTCAATCGTGTCCAGCAGGGTTCGAAACTGGTGAATAACGCCGCCGCGACCATGATCGATATTGTCAGTTCGGTGACCCGCGTGAACGACATTATGGGAGAAATTGCCTCTGCGTCGGAAGAACAACAGCGGGGGATTGAGCAGGTTGCACAGGCTGTCAGCCAGATGGATCAGGTGACTCAGCAGAACGCCTCGCTGGTAGAAGAAGCGGCGGTGGCAACGGAACAACTGGCGAATCAGGCCGACCATCTTTCGTCGCGTGTGGCGGTATTTACCCTTGAAGAACATGAAGTAGCACGACATGAGTCGGTGCAGTTACAAATTGCGCCAGTGGTATCCTGA", - "dna_sequence_length": 1602, - "functions": [ - "methyl-accepting protein IV" - ], - "id": "CDS_1878", - "location": [ - [ - "NC_000913", - 1970984, - "-", - 1602 - ] - ], - "md5": "d8c25ca4be670b1c78fb0e85c4380333", - "parent_gene": "", - "protein_md5": "45e286554e3df152f56813118e2fe79a", - "protein_translation": "MFNRIRISTTLFLILILCGILQIGSNGMSFWAFRDDLQRLNQVEQSNQQRAALAQTRAVMLQASTALNKAGTLTALSYPADDIKTLMTTARASLTQSTTLFKSFMAMTAGNEHVRGLQKETEKSFARWHNDLEHQATWLESNQLSDFLTAPVQGSQNAFDVNFEAWQLEINHVLEAASAQSQRNYQISALVFISMIIVAAIYISSALWWTRKMIVQPLAIIGSHFDSIAAGNLARPIAVYGRNEITAIFASLKTMQQALRGTVSDVRKGSQEMHIGIAEIVAGNNDLSSRTEQQAASLAQTAASMEQLTATVGQNADNARQASELAKNAATTAQAGGVQVSTMTHTMQEIATSSQKIGDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKGLIEESVNRVQQGSKLVNNAAATMIDIVSSVTRVNDIMGEIASASEEQQRGIEQVAQAVSQMDQVTQQNASLVEEAAVATEQLANQADHLSSRVAVFTLEEHEVARHESVQLQIAPVVS", - "protein_translation_length": 533, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1887" - ], - [ - "gene_synonym", - "tar" - ], - [ - "gene_synonym", - "ASAP:ABE-0006290" - ], - [ - "gene_synonym", - "NP_416400.1" - ], - [ - "gene_synonym", - "GeneID:946399" - ], - [ - "gene_synonym", - "GI:16129838" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07017" - ], - [ - "gene_synonym", - "EcoGene:EG10988" - ], - [ - "gene_synonym", - "cheM" - ], - [ - "gene_synonym", - "JW1875" - ], - [ - "gene_synonym", - "b1886" - ] - ], - "dna_sequence": "ATGATTAACCGTATCCGCGTAGTCACGCTGTTGGTAATGGTGCTGGGGGTATTCGCACTGTTACAGCTTATTTCCGGCAGTCTGTTTTTTTCTTCCCTTCACCATAGCCAGAAGAGCTTTGTGGTTTCCAATCAATTACGGGAACAGCAGGGCGAGCTGACGTCAACCTGGGATTTAATGCTGCAAACGCGCATTAACCTGAGTCGTTCAGCGGTACGGATGATGATGGATTCCTCCAATCAACAAAGTAACGCCAAAGTTGAATTGCTCGATAGCGCCAGGAAAACATTGGCGCAGGCAGCGACGCATTATAAAAAATTCAAAAGCATGGCACCGTTACCTGAAATGGTCGCTACCAGTCGTAATATTGATGAAAAATATAAAAACTATTACACAGCGTTAACTGAACTGATTGATTATCTAGATTATGGCAATACTGGAGCTTATTTCGCTCAGCCAACCCAGGGAATGCAAAATGCAATGGGCGAAGCGTTTGCTCAGTACGCCCTCAGCAGTGAAAAACTGTATCGCGATATCGTCACTGACAACGCAGATGATTACCGATTTGCCCAGTGGCAACTGGCGGTTATCGCGCTGGTGGTGGTATTGATTCTGCTGGTGGCGTGGTACGGCATTCGCCGTATGTTGCTTACTCCGCTGGCAAAAATTATTGCTCACATTCGCGAAATCGCCGGTGGTAACCTGGCGAATACCCTGACCATTGACGGGCGCAGTGAAATGGGCGACCTGGCGCAGAGCGTTTCACATATGCAACGCTCTTTGACTGACACCGTCACTCATGTCCGCGAAGGTTCAGATGCCATCTATGCCGGTACCCGTGAAATTGCGGCGGGCAACACCGATCTTTCCTCCCGTACTGAACAGCAGGCATCCGCGCTGGAAGAAACTGCCGCCAGCATGGAGCAGCTCACCGCGACAGTGAAGCAAAACGCCGATAACGCCCGCCAGGCCTCGCAACTGGCGCAAAGTGCCTCCGACACCGCCCAGCACGGCGGCAAAGTGGTGGATGGCGTAGTGAAAACGATGCATGAGATCGCCGATAGTTCGAAGAAAATTGCCGACATTATCAGCGTTATCGACGGTATTGCCTTCCAGACTAATATCCTCGCGCTGAATGCCGCGGTTGAAGCCGCGCGTGCGGGTGAACAGGGCCGTGGTTTTGCCGTGGTGGCGGGTGAAGTGCGTAATCTTGCCAGTCGCAGCGCCCAGGCGGCAAAAGAGATCAAAGCCCTCATTGAAGACTCCGTCTCACGCGTTGATACCGGTTCGGTGCTGGTCGAAAGCGCCGGGGAAACAATGAACAATATCGTCAATGCTGTCACTCGCGTGACTGACATTATGGGCGAGATTGCATCGGCATCGGATGAACAGAGCCGTGGCATCGATCAAGTCGCATTGGCGGTTTCGGAAATGGATCGCGTCACGCAACAGAACGCATCGCTGGTGCAGGAATCAGCTGCCGCCGCCGCTGCGCTGGAAGAACAGGCGAGTCGTTTAACGCAAGCAGTTTCCGCGTTCCGTCTGGCAGCCAGCCCACTCACCAATAAACCGCAAACACCATCCCGTCCTGCCAGTGAGCAACCACCGGCTCAGCCACGACTGCGAATTGCTGAACAAGATCCAAACTGGGAAACATTTTGA", - "dna_sequence_length": 1662, - "functions": [ - "methyl-accepting chemotaxis protein II" - ], - "id": "CDS_1879", - "location": [ - [ - "NC_000913", - 1972691, - "-", - 1662 - ] - ], - "md5": "877b1f61f49c70ec1ef1884df9d53fe8", - "parent_gene": "", - "protein_md5": "ff05f294e6bf7a816da63051f614c5d8", - "protein_translation": "MINRIRVVTLLVMVLGVFALLQLISGSLFFSSLHHSQKSFVVSNQLREQQGELTSTWDLMLQTRINLSRSAVRMMMDSSNQQSNAKVELLDSARKTLAQAATHYKKFKSMAPLPEMVATSRNIDEKYKNYYTALTELIDYLDYGNTGAYFAQPTQGMQNAMGEAFAQYALSSEKLYRDIVTDNADDYRFAQWQLAVIALVVVLILLVAWYGIRRMLLTPLAKIIAHIREIAGGNLANTLTIDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAIYAGTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNARQASQLAQSASDTAQHGGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETMNNIVNAVTRVTDIMGEIASASDEQSRGIDQVALAVSEMDRVTQQNASLVQESAAAAAALEEQASRLTQAVSAFRLAASPLTNKPQTPSRPASEQPPAQPRLRIAEQDPNWETF", - "protein_translation_length": 553, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cheW" - ], - [ - "gene_synonym", - "ASAP:ABE-0006292" - ], - [ - "gene_synonym", - "ECK1888" - ], - [ - "gene_synonym", - "GI:16129839" - ], - [ - "gene_synonym", - "GeneID:946400" - ], - [ - "gene_synonym", - "NP_416401.1" - ], - [ - "gene_synonym", - "b1887" - ], - [ - "gene_synonym", - "EcoGene:EG10149" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A964" - ], - [ - "gene_synonym", - "JW1876" - ] - ], - "dna_sequence": "ATGACCGGTATGACGAATGTAACAAAGCTGGCCAGCGAGCCGTCAGGCCAGGAATTTCTGGTATTTACCCTTGGTGATGAAGAGTACGGTATTGATATCCTGAAAGTGCAGGAGATCCGTGGCTACGATCAGGTAACACGGATTGCGAACACGCCAGCGTTTATCAAAGGCGTCACGAATCTGCGCGGCGTTATTGTGCCGATTGTTGACTTACGAATTAAGTTCAGCCAGGTGGATGTGGACTATAACGACAACACGGTAGTTATCGTCCTGAATCTCGGACAGCGGGTGGTCGGCATCGTGGTTGACGGCGTCTCAGACGTGCTTTCATTGACGGCGGAGCAAATTCGTCCGGCACCGGAATTTGCCGTGACGCTTTCAACAGAATATCTCACTGGACTGGGCGCACTGGGCGACCGGATGTTGATTCTGGTGAACATCGAAAAACTGCTGAACAGCGAAGAGATGGCGCTGTTAGATAGCGCGGCGTCAGAAGTGGCGTAA", - "dna_sequence_length": 504, - "functions": [ - "purine-binding chemotaxis protein" - ], - "id": "CDS_1880", - "location": [ - [ - "NC_000913", - 1973339, - "-", - 504 - ] - ], - "md5": "c479e1a8bce3a139a374d375a05d55f4", - "parent_gene": "", - "protein_md5": "fd56555bf7be884ab313102eaabc0485", - "protein_translation": "MTGMTNVTKLASEPSGQEFLVFTLGDEEYGIDILKVQEIRGYDQVTRIANTPAFIKGVTNLRGVIVPIVDLRIKFSQVDVDYNDNTVVIVLNLGQRVVGIVVDGVSDVLSLTAEQIRPAPEFAVTLSTEYLTGLGALGDRMLILVNIEKLLNSEEMALLDSAASEVA", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006294" - ], - [ - "gene_synonym", - "ECK1889" - ], - [ - "gene_synonym", - "GeneID:946401" - ], - [ - "gene_synonym", - "GI:16129840" - ], - [ - "gene_synonym", - "b1888" - ], - [ - "gene_synonym", - "EcoGene:EG10146" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07363" - ], - [ - "gene_synonym", - "cheA" - ], - [ - "gene_synonym", - "NP_416402.1" - ], - [ - "gene_synonym", - "JW1877" - ] - ], - "dna_sequence": "GTGAGCATGGATATAAGCGATTTTTATCAGACATTTTTTGATGAAGCGGACGAACTGTTGGCTGACATGGAGCAGCATTTGCTGGTTTTGCAGCCGGAAGCGCCAGATGCCGAACAATTGAATGCCATCTTTCGGGCTGCCCACTCGATCAAAGGAGGGGCAGGAACTTTTGGCTTCAGCGTTTTGCAGGAAACCACGCATCTGATGGAAAACCTGCTCGATGAAGCCAGACGAGGTGAGATGCAACTCAACACCGACATTATCAATCTGTTTTTGGAAACGAAGGACATCATGCAAGAACAGCTCGACGCTTATAAACAGTCGCAAGAGCCGGATGCCGCCAGCTTCGATTATATCTGCCAGGCCTTGCGTCAACTGGCATTAGAAGCGAAAGGCGAAACGCCATCCGCAGTGACCCGATTAAGTGTGGTTGCCAAAAGTGAACCGCAAGATGAGCAGAGTCGCAGTCAGTCGCCGCGACGAATTATCCTTTCGCGCCTGAAGGCCGGGGAAGTCGACCTGCTGGAAGAAGAACTGGGACATCTGACAACGTTAACTGACGTGGTGAAAGGGGCGGATTCGCTCTCGGCAATATTACCGGGCGACATCGCCGAAGATGACATCACAGCGGTACTCTGTTTTGTGATTGAAGCCGATCAGATTACCTTTGAAACAGTAGAAGTCTCGCCAAAAATATCCACCCCACCAGTGCTTAAACTGGCAGCCGAACAAGCGCCAACCGGCCGCGTGGAGCGGGAAAAAACGACGCGCAGCAATGAATCCACCAGCATCCGTGTAGCGGTAGAAAAGGTTGATCAATTAATTAACCTCGTCGGCGAGCTGGTTATCACCCAGTCCATGCTTGCCCAGCGTTCCAGCGAACTGGACCCGGTTAATCATGGTGATTTGATAACCAGCATGGGGCAGTTACAACGTAACGCCCGTGATTTGCAGGAATCAGTGATGTCGATTCGCATGATGCCGATGGAATATGTTTTTAGTCGCTATCCCCGGCTGGTGCGTGATCTGGCGGGAAAACTCGGCAAGCAGGTAGAACTGACGCTGGTGGGCAGTTCTACTGAACTCGACAAAAGCCTGATAGAACGCATTATCGACCCGCTGACCCACCTGGTACGCAATAGCCTCGATCACGGTATTGAACTGCCAGAAAAACGGCTCGCCGCAGGTAAAAACAGCGTCGGAAATTTAATTCTGTCTGCCGAACATCAGGGCGGCAACATTTGCATTGAAGTGACCGACGATGGGGCGGGGCTAAACCGTGAGCGAATTCTGGCAAAAGCGGCCTCGCAAGGTTTGACTGTCAGCGAAAACATGAGCGACGACGAAGTCGCGATGCTGATATTTGCACCTGGCTTCTCCACGGCAGAGCAGGTCACCGACGTCTCCGGGCGCGGCGTCGGCATGGACGTCGTTAAACGTAATATCCAGAAGATGGGCGGTCATGTCGAAATCCAGTCGAAGCAGGGTACTGGCACTACGATCCGCATTTTACTGCCGCTGACGCTGGCCATCCTCGACGGCATGTCCGTACGCGTTGCGGATGAAGTTTTCATTCTGCCGCTGAATGCTGTTATGGAATCACTGCAACCCCGTGAAGCCGATCTCCATCCACTGGCCGGCGGCGAGCGGGTGCTGGAAGTGCGGGGTGAATATCTGCCCATCGTCGAACTGTGGAAAGTGTTCAACGTCGCGGGCGCGAAAACCGAAGCCACCCAGGGAATTGTGGTGATCTTACAAAGTGGCGGTCGCCGCTACGCCTTGCTGGTGGATCAATTAATTGGTCAACACCAGGTTGTGGTTAAAAACCTTGAAAGTAACTATCGCAAAGTCCCCGGCATTTCTGCTGCGACCATTCTTGGCGACGGCAGCGTGGCACTGATTGTTGATGTCTCCGCCTTGCAGGCGATAAACCGCGAACAACGTATGGCGAACACCGCCGCCTGA", - "dna_sequence_length": 1965, - "functions": [ - "fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein" - ], - "id": "CDS_1881", - "location": [ - [ - "NC_000913", - 1975324, - "-", - 1965 - ] - ], - "md5": "72c5adc0183a37dec947007aaba7a840", - "parent_gene": "", - "protein_md5": "7e252cfb7be1df82f119501d6e17a2a6", - "protein_translation": "MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA", - "protein_translation_length": 654, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1890" - ], - [ - "gene_synonym", - "ASAP:ABE-0006297" - ], - [ - "gene_synonym", - "motB" - ], - [ - "gene_synonym", - "NP_416403.1" - ], - [ - "gene_synonym", - "JW1878" - ], - [ - "gene_synonym", - "EcoGene:EG10602" - ], - [ - "gene_synonym", - "GI:16129841" - ], - [ - "gene_synonym", - "b1889" - ], - [ - "gene_synonym", - "GeneID:946402" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF06" - ], - [ - "gene_synonym", - "flaJ" - ] - ], - "dna_sequence": "ATGAAGAATCAAGCGCATCCGATTATTGTCGTCAAACGACGCAAAGCCAAAAGCCACGGGGCAGCACATGGATCGTGGAAGATTGCTTATGCCGACTTTATGACTGCGATGATGGCCTTTTTTCTGGTGATGTGGCTGATCTCCATCTCCAGCCCAAAAGAGCTGATTCAGATTGCGGAGTACTTCCGGACTCCACTGGCGACTGCGGTTACGGGCGGCGATCGCATTTCTAATAGTGAAAGCCCAATTCCCGGCGGTGGTGATGATTACACCCAAAGCCAGGGGGAAGTGAATAAGCAGCCGAACATCGAAGAGCTGAAAAAACGCATGGAGCAAAGTCGATTGCGGAAATTGCGGGGTGATCTCGACCAGTTGATAGAGTCCGATCCGAAACTGCGGGCGTTACGTCCCCATCTCAAAATCGATCTGGTCCAGGAAGGTCTACGTATTCAGATCATCGATAGCCAGAATCGCCCGATGTTTAGAACCGGCAGTGCCGATGTCGAACCCTATATGCGCGACATTCTGCGCGCCATTGCGCCTGTACTGAACGGTATTCCCAACCGTATTAGCCTTTCAGGTCATACCGATGATTTCCCCTACGCCAGCGGTGAGAAAGGATATAGCAACTGGGAGCTTTCTGCCGATCGGGCCAATGCATCCCGCCGCGAACTGATGGTCGGAGGGTTGGATAGCGGCAAAGTGTTACGTGTCGTCGGCATGGCGGCAACGATGCGCTTAAGCGATCGCGGACCTGATGATGCCGTCAACCGTCGCATCAGCCTGCTGGTACTGAACAAACAAGCCGAACAGGCCATTTTGCATGAAAACGCCGAAAGCCAGAATGAGCCAGTAAGCGCCCTGGAAAAACCTGAGGTTGCACCACAGGTCAGTGTTCCCACAATGCCATCAGCCGAACCGAGGTGA", - "dna_sequence_length": 927, - "functions": [ - "protein that enables flagellar motor rotation" - ], - "id": "CDS_1882", - "location": [ - [ - "NC_000913", - 1976255, - "-", - 927 - ] - ], - "md5": "f456d2c84b6c49e19f8846156fad77ce", - "parent_gene": "", - "protein_md5": "10457d0c0a94dd8cb27f07f331deffdf", - "protein_translation": "MKNQAHPIIVVKRRKAKSHGAAHGSWKIAYADFMTAMMAFFLVMWLISISSPKELIQIAEYFRTPLATAVTGGDRISNSESPIPGGGDDYTQSQGEVNKQPNIEELKKRMEQSRLRKLRGDLDQLIESDPKLRALRPHLKIDLVQEGLRIQIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDDAVNRRISLLVLNKQAEQAILHENAESQNEPVSALEKPEVAPQVSVPTMPSAEPR", - "protein_translation_length": 308, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "motA" - ], - [ - "gene_synonym", - "GeneID:947564" - ], - [ - "gene_synonym", - "ECK1891" - ], - [ - "gene_synonym", - "GI:16129842" - ], - [ - "gene_synonym", - "ASAP:ABE-0006299" - ], - [ - "gene_synonym", - "EcoGene:EG10601" - ], - [ - "gene_synonym", - "JW1879" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09348" - ], - [ - "gene_synonym", - "NP_416404.1" - ], - [ - "gene_synonym", - "b1890" - ], - [ - "gene_synonym", - "flaJ" - ] - ], - "dna_sequence": "GTGCTTATCTTATTAGGTTACCTGGTTGTTCTCGGTACAGTTTTCGGCGGTTATTTGATGACCGGTGGAAGCCTTGGAGCACTCTATCAACCCGCTGAACTGGTGATTATTGCCGGTGCAGGGATTGGGTCGTTTATCGTCGGCAATAATGGCAAAGCGATTAAAGGCACGCTGAAGGCGCTGCCGTTGCTGTTTCGTCGCTCCAAATACACCAAAGCAATGTATATGGATCTGCTGGCTCTGCTTTATCGGTTGATGGCGAAATCGCGGCAGATGGGGATGTTTTCGCTGGAACGTGATATTGAAAATCCCCGTGAGAGCGAGATCTTCGCCAGCTACCCACGCATCCTCGCGGATAGCGTCATGCTTGATTTTATCGTCGATTATCTGCGCCTGATTATCAGCGGTCACATGAACACCTTCGAAATCGAAGCTCTGATGGATGAAGAGATTGAGACGCACGAAAGCGAGGCAGAAGTCCCGGCGAACAGTCTGGCGCTGGTCGGGGACTCACTTCCGGCGTTTGGTATTGTTGCGGCTGTAATGGGGGTCGTTCACGCGTTAGGTTCAGCCGATCGTCCTGCCGCCGAGCTGGGTGCGCTTATCGCACATGCGATGGTGGGGACTTTCCTCGGCATTTTATTGGCTTACGGATTTATTTCCCCATTAGCGACTGTTTTACGTCAGAAAAGCGCCGAAACCAGCAAAATGATGCAGTGCGTCAAAGTCACTCTGCTTTCTAATCTGAACGGTTACGCACCGCCTATCGCCGTTGAGTTTGGTCGCAAAACGCTCTATTCCAGCGAACGTCCGTCGTTTATTGAACTGGAAGAGCATGTGCGTGCGGTGAAAAATCCGCAACAACAGACGACAACCGAGGAAGCATGA", - "dna_sequence_length": 888, - "functions": [ - "proton conductor component of flagella motor" - ], - "id": "CDS_1883", - "location": [ - [ - "NC_000913", - 1977139, - "-", - 888 - ] - ], - "md5": "d037776c7ec7e94b6c51eee4951ff9ab", - "parent_gene": "", - "protein_md5": "7e6fbe02d7c51fe3800d8b7ecee169c6", - "protein_translation": "MLILLGYLVVLGTVFGGYLMTGGSLGALYQPAELVIIAGAGIGSFIVGNNGKAIKGTLKALPLLFRRSKYTKAMYMDLLALLYRLMAKSRQMGMFSLERDIENPRESEIFASYPRILADSVMLDFIVDYLRLIISGHMNTFEIEALMDEEIETHESEAEVPANSLALVGDSLPAFGIVAAVMGVVHALGSADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETSKMMQCVKVTLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVKNPQQQTTTEEA", - "protein_translation_length": 295, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1892" - ], - [ - "gene_synonym", - "GeneID:947280" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABY7" - ], - [ - "gene_synonym", - "JW1880" - ], - [ - "gene_synonym", - "GI:16129843" - ], - [ - "gene_synonym", - "flhC" - ], - [ - "gene_synonym", - "NP_416405.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006301" - ], - [ - "gene_synonym", - "EcoGene:EG10319" - ], - [ - "gene_synonym", - "flaI" - ], - [ - "gene_synonym", - "b1891" - ] - ], - "dna_sequence": "ATGAGTGAAAAAAGCATTGTTCAGGAAGCGCGGGATATTCAGCTGGCAATGGAATTGATCACCCTGGGCGCTCGTTTGCAGATGCTGGAAAGCGAAACACAGTTAAGTCGCGGACGCCTGATAAAACTTTATAAAGAACTGCGCGGAAGCCCACCGCCGAAAGGCATGCTGCCATTCTCAACCGACTGGTTTATGACCTGGGAACAAAACGTTCATGCTTCGATGTTCTGTAATGCATGGCAGTTTTTACTGAAAACCGGTTTGTGTAATGGCGTCGATGCGGTGATCAAAGCCTACCGTTTATACCTTGAACAGTGCCCACAAGCAGAAGAAGGACCACTGCTGGCATTAACCCGTGCCTGGACATTGGTGCGGTTTGTTGAAAGTGGATTACTGCAACTTTCCAGCTGCAACTGCTGCGGCGGCAATTTTATTACCCACGCTCACCAGCCTGTTGGCAGCTTTGCCTGCAGCTTATGTCAACCGCCATCCCGGGCAGTAAAAAGACGTAAACTTTCCCAGAATCCTGCCGATATTATCCCACAACTGCTGGATGAACAGAGAGTACAGGCTGTTTAA", - "dna_sequence_length": 579, - "functions": [ - "flagellar class II regulon transcriptional activator, with FlhD" - ], - "id": "CDS_1884", - "location": [ - [ - "NC_000913", - 1977844, - "-", - 579 - ] - ], - "md5": "88cc27b2fc9ac4e289f3b5cf1002e3a8", - "parent_gene": "", - "protein_md5": "b655b9e362d93c5fd3fada70d38c158f", - "protein_translation": "MSEKSIVQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPFSTDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLYLEQCPQAEEGPLLALTRAWTLVRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLCQPPSRAVKRRKLSQNPADIIPQLLDEQRVQAV", - "protein_translation_length": 192, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416406.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8S9" - ], - [ - "gene_synonym", - "ECK1893" - ], - [ - "gene_synonym", - "ASAP:ABE-0006303" - ], - [ - "gene_synonym", - "JW1881" - ], - [ - "gene_synonym", - "EcoGene:EG10320" - ], - [ - "gene_synonym", - "flbB" - ], - [ - "gene_synonym", - "GeneID:945442" - ], - [ - "gene_synonym", - "flhD" - ], - [ - "gene_synonym", - "b1892" - ], - [ - "gene_synonym", - "GI:145698279" - ] - ], - "dna_sequence": "ATGCATACCTCCGAGTTGCTGAAACACATTTATGACATCAACTTGTCATATTTACTACTTGCACAGCGTTTGATTGTTCAGGACAAAGCGTCCGCTATGTTTCGTCTCGGCATAAATGAAGAAATGGCGACAACGTTAGCGGCACTGACTCTTCCGCAAATGGTTAAGCTGGCAGAAACCAATCAACTGGTTTGTCACTTCCGTTTTGACAGCCACCAGACGATTACTCAGTTGACGCAAGATTCCCGCGTTGACGATCTCCAGCAAATTCATACCGGCATCATGCTCTCAACACGCTTGCTGAATGATGTTAATCAGCCTGAAGAAGCGCTGCGCAAGAAAAGGGCCTGA", - "dna_sequence_length": 351, - "functions": [ - "flagellar class II regulon transcriptional activator, with FlhC" - ], - "id": "CDS_1885", - "location": [ - [ - "NC_000913", - 1978197, - "-", - 351 - ] - ], - "md5": "299d2e96e523782319df5b511d3d6d75", - "parent_gene": "", - "protein_md5": "7f806aa4d5cc9a3a755ef1ace640419b", - "protein_translation": "MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMATTLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQDSRVDDLQQIHTGIMLSTRLLNDVNQPEEALRKKRA", - "protein_translation_length": 116, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0022" - ], - [ - "gene_synonym", - "NP_416407.1" - ], - [ - "gene_synonym", - "insB1" - ], - [ - "gene_synonym", - "GeneID:945867" - ], - [ - "gene_synonym", - "GI:16129845" - ], - [ - "gene_synonym", - "EcoGene:EG40002" - ], - [ - "gene_synonym", - "b1893" - ], - [ - "gene_synonym", - "ASAP:ABE-0006308" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF30" - ] - ], - "dna_sequence": "ATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGTCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA", - "dna_sequence_length": 504, - "functions": [ - "IS1 transposase B" - ], - "id": "CDS_1886", - "location": [ - [ - "NC_000913", - 1979021, - "-", - 504 - ] - ], - "md5": "9b3b0a523236fbbb94e9a150e2349e7c", - "parent_gene": "", - "protein_md5": "a7ce8c3d73c6cbaea2dc673889ba240c", - "protein_translation": "MPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "insA" - ], - [ - "gene_synonym", - "NP_416408.1" - ], - [ - "gene_synonym", - "GI:16129846" - ], - [ - "gene_synonym", - "EcoGene:EG40001" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF13" - ], - [ - "gene_synonym", - "ASAP:ABE-0006311" - ], - [ - "gene_synonym", - "b1894" - ], - [ - "gene_synonym", - "ECK4541" - ], - [ - "gene_synonym", - "GeneID:945800" - ] - ], - "dna_sequence": "GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA", - "dna_sequence_length": 276, - "functions": [ - "IS1 repressor TnpA" - ], - "id": "CDS_1887", - "location": [ - [ - "NC_000913", - 1979215, - "-", - 276 - ] - ], - "md5": "db0d756792984c1e534a2dad9bfdde5f", - "parent_gene": "", - "protein_md5": "edc4311bb7ac3cf8e138290b7630fdda", - "protein_translation": "MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR", - "protein_translation_length": 91, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1894" - ], - [ - "gene_synonym", - "GI:16129847" - ], - [ - "gene_synonym", - "JW1884" - ], - [ - "gene_synonym", - "EcoGene:EG12862" - ], - [ - "gene_synonym", - "NP_416409.1" - ], - [ - "gene_synonym", - "GeneID:946404" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46888" - ], - [ - "gene_synonym", - "ASAP:ABE-0006316" - ], - [ - "gene_synonym", - "yecG" - ], - [ - "gene_synonym", - "b1895" - ], - [ - "gene_synonym", - "uspC" - ] - ], - "dna_sequence": "ATGAGCTATAGCAATATTCTTGTCGCTGTTGCGGTTACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGACCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAGTTAATTCAGGATGCGGGGTATCCCGTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCGCGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAA", - "dna_sequence_length": 429, - "functions": [ - "universal stress protein" - ], - "id": "CDS_1888", - "location": [ - [ - "NC_000913", - 1979753, - "+", - 429 - ] - ], - "md5": "e9e64593c83dec8cb954cee037a7d9ee", - "parent_gene": "", - "protein_md5": "d3a6fcf02a643e458dc70faef1d65bcb", - "protein_translation": "MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRSVMHEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCHKHHFDLVICGNHNHSFFSRASCSAKRVIASSEVDVLLVPLTGD", - "protein_translation_length": 142, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416410.1" - ], - [ - "gene_synonym", - "ECK1895" - ], - [ - "gene_synonym", - "GI:16129848" - ], - [ - "gene_synonym", - "otsA" - ], - [ - "gene_synonym", - "pexA" - ], - [ - "gene_synonym", - "EcoGene:EG11751" - ], - [ - "gene_synonym", - "GeneID:946405" - ], - [ - "gene_synonym", - "b1896" - ], - [ - "gene_synonym", - "JW5312" - ], - [ - "gene_synonym", - "ASAP:ABE-0006318" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31677" - ] - ], - "dna_sequence": "ATGAGTCGTTTAGTCGTAGTATCTAACCGGATTGCACCACCAGACGAGCACGCCGCCAGTGCCGGTGGCCTTGCCGTTGGCATACTGGGGGCACTGAAAGCCGCAGGCGGACTGTGGTTTGGCTGGAGTGGTGAAACAGGGAATGAGGATCAGCCGCTAAAAAAGGTGAAAAAAGGTAACATTACGTGGGCCTCTTTTAACCTCAGCGAACAGGACCTTGACGAATACTACAACCAATTCTCCAATGCCGTTCTCTGGCCCGCTTTTCATTATCGGCTCGATCTGGTGCAATTTCAGCGTCCTGCCTGGGACGGCTATCTACGCGTAAATGCGTTGCTGGCAGATAAATTACTGCCGCTGTTGCAAGACGATGACATTATCTGGATCCACGATTATCACCTGTTGCCATTTGCGCATGAATTACGCAAACGGGGAGTGAATAATCGCATTGGTTTCTTTCTGCATATTCCTTTCCCGACACCGGAAATCTTCAACGCGCTGCCGACATATGACACCTTGCTTGAACAGCTTTGTGATTATGATTTGCTGGGTTTCCAGACAGAAAACGATCGTCTGGCGTTCCTGGATTGTCTTTCTAACCTGACCCGCGTCACGACACGTAGCGCAAAAAGCCATACAGCCTGGGGCAAAGCATTTCGAACAGAAGTCTACCCGATCGGCATTGAACCGAAAGAAATAGCCAAACAGGCTGCCGGGCCACTGCCGCCAAAACTGGCGCAACTTAAAGCGGAACTGAAAAACGTACAAAATATCTTTTCTGTCGAACGGCTGGATTATTCCAAAGGTTTGCCAGAGCGTTTTCTCGCCTATGAAGCGTTGCTGGAAAAATATCCGCAGCATCATGGTAAAATTCGTTATACCCAGATTGCACCAACGTCGCGTGGTGATGTGCAAGCCTATCAGGATATTCGTCATCAGCTCGAAAATGAAGCTGGACGAATTAATGGTAAATACGGGCAATTAGGCTGGACGCCGCTTTATTATTTGAATCAGCATTTTGACCGTAAATTACTGATGAAAATATTCCGCTACTCTGACGTGGGCTTAGTGACGCCACTGCGTGACGGGATGAACCTGGTAGCAAAAGAGTATGTTGCTGCTCAGGACCCAGCCAATCCGGGCGTTCTTGTTCTTTCGCAATTTGCGGGAGCGGCAAACGAGTTAACGTCGGCGTTAATTGTTAACCCCTACGATCGTGACGAAGTTGCAGCTGCGCTGGATCGTGCATTGACTATGTCGCTGGCGGAACGTATTTCCCGTCATGCAGAAATGCTGGACGTTATCGTGAAAAACGATATTAACCACTGGCAGGAGTGCTTCATTAGCGACCTAAAGCAGATAGTTCCGCGAAGCGCGGAAAGCCAGCAGCGCGATAAAGTTGCTACCTTTCCAAAGCTTGCGTAG", 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- [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31678" - ], - [ - "gene_synonym", - "JW1886" - ], - [ - "gene_synonym", - "ASAP:ABE-0006320" - ], - [ - "gene_synonym", - "GeneID:946406" - ], - [ - "gene_synonym", - "EcoGene:EG11752" - ], - [ - "gene_synonym", - "otsB" - ], - [ - "gene_synonym", - "b1897" - ], - [ - "gene_synonym", - "otsP" - ] - ], - "dna_sequence": "GTGACAGAACCGTTAACCGAAACCCCTGAACTATCCGCGAAATATGCCTGGTTTTTTGATCTTGATGGAACGCTGGCGGAAATCAAACCGCATCCCGATCAGGTCGTCGTGCCTGACAATATTCTGCAAGGACTACAGCTACTGGCAACCGCAAGTGATGGTGCATTGGCATTGATATCAGGGCGCTCAATGGTGGAGCTTGACGCACTGGCAAAACCTTATCGCTTCCCGTTAGCGGGCGTGCATGGGGCGGAGCGCCGTGACATCAATGGTAAAACACATATCGTTCATCTGCCGGATGCGATTGCGCGTGATATTAGCGTGCAACTGCATACAGTCATCGCTCAGTATCCCGGCGCGGAGCTGGAGGCGAAAGGGATGGCTTTTGCGCTGCATTATCGTCAGGCTCCGCAGCATGAAGACGCATTAATGACATTAGCGCAACGTATTACTCAGATCTGGCCACAAATGGCGTTACAGCAGGGAAAGTGTGTTGTCGAGATCAAACCGAGAGGTACCAGTAAAGGTGAGGCAATTGCAGCTTTTATGCAGGAAGCTCCCTTTATCGGGCGAACGCCCGTATTTCTGGGCGATGATTTAACCGATGAATCTGGCTTCGCAGTCGTTAACCGACTGGGCGGAATGTCAGTAAAAATTGGCACAGGTGCAACTCAGGCATCATGGCGACTGGCGGGTGTGCCGGATGTCTGGAGCTGGCTTGAAATGATAACCACCGCATTACAACAAAAAAGAGAAAATAACAGGAGTGATGACTATGAGTCGTTTAGTCGTAGTATCTAA", - "dna_sequence_length": 801, - "functions": [ - "trehalose-6-phosphate phosphatase, biosynthetic" - ], - "id": "CDS_1890", - "location": [ - [ - "NC_000913", - 1982387, - "-", - 801 - ] - ], - "md5": "dd6d161c610fc7896bae87d6ec7c14da", - "parent_gene": "", - "protein_md5": "4bf053c6d3c6a5b199f01fbbcd42814e", - "protein_translation": "MTEPLTETPELSAKYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATASDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTVIAQYPGAELEAKGMAFALHYRQAPQHEDALMTLAQRITQIWPQMALQQGKCVVEIKPRGTSKGEAIAAFMQEAPFIGRTPVFLGDDLTDESGFAVVNRLGGMSVKIGTGATQASWRLAGVPDVWSWLEMITTALQQKRENNRSDDYESFSRSI", - "protein_translation_length": 266, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4460" - ], - [ - "gene_synonym", - "ECK1897" - ], - [ - "gene_synonym", - "GeneID:948923" - ], - [ - "gene_synonym", - "EcoGene:EG10059" - ], - [ - "gene_synonym", - "JW1887" - ], - [ - "gene_synonym", - "YP_026162.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0174093" - ], - [ - "gene_synonym", - "araH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE26" - ], - [ - "gene_synonym", - "GI:145698280" - ] - ], - "dna_sequence": "ATGTCTTCTGTTTCTACATCGGGGTCTGGCGCACCTAAGTCGTCATTCAGCTTCGGGCGTATCTGGGATCAGTACGGCATGCTGGTGGTGTTTGCGGTGCTCTTTATCGCCTGTGCCATTTTTGTCCCAAATTTTGCCACCTTCATTAATATGAAAGGGTTGGGCCTGGCAATTTCCATGTCGGGGATGGTGGCTTGTGGCATGTTGTTCTGCCTCGCTTCCGGTGACTTTGACCTTTCTGTCGCCTCCGTAATTGCCTGTGCGGGTGTCACCACGGCGGTGGTTATTAACCTGACTGAAAGCCTGTGGATTGGCGTGGCAGCGGGGTTGTTGCTGGGCGTTCTCTGTGGCCTGGTCAATGGCTTTGTTATCGCCAAACTGAAAATAAATGCTCTGATCACGACATTGGCAACGATGCAGATTGTTCGAGGTCTGGCGTACATCATTTCAGACGGTAAAGCGGTCGGTATCGAAGATGAAAGCTTCTTTGCCCTTGGTTACGCCAACTGGTTCGGTCTGCCTGCGCCAATCTGGCTCACCGTCGCGTGTCTGATTATCTTTGGTTTGCTGCTGAATAAAACCACCTTTGGTCGTAACACCCTGGCGATTGGCGGGAACGAAGAGGCCGCGCGTCTGGCGGGTGTACCGGTTGTTCGCACCAAAATTATTATCTTTGTTCTCTCAGGCCTGGTATCAGCGATAGCCGGAATTATTCTGGCTTCACGTATGACCAGTGGGCAGCCAATGACGTCGATTGGTTATGAGCTGATTGTTATCTCCGCCTGCGTTTTAGGTGGCGTTTCTCTGAAAGGTGGCATCGGAAAAATCTCATATGTGGTGGCGGGTATCTTAATTTTAGGCACCGTGGAAAACGCCATGAACCTGCTTAATATTTCTCCTTTCGCGCAGTACGTGGTTCGCGGCTTAATCCTGCTGGCAGCGGTGATCTTCGACCGTTACAAGCAAAAAGCGAAACGCACTGTCTGA", - "dna_sequence_length": 987, - "functions": [ - "L-arabinose ABC transporter permease" - ], - "id": "CDS_1891", - "location": [ - [ - "NC_000913", - 1983540, - "-", - 987 - ] - ], - "md5": "2b63bfb0cf2828c8c78e505fb6d1a52f", - "parent_gene": "", - "protein_md5": "c798b547d42ff4db2edd13f264dd2f64", - "protein_translation": "MSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVPNFATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESLWIGVAAGLLLGVLCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDESFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV", - "protein_translation_length": 328, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1888" - ], - [ - "gene_synonym", - "ASAP:ABE-0006328" - ], - [ - "gene_synonym", - "ECK1898" - ], - [ - "gene_synonym", - "GI:16129850" - ], - [ - "gene_synonym", - "EcoGene:EG10058" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAF3" - ], - [ - "gene_synonym", - "araG" - ], - [ - "gene_synonym", - "NP_416413.1" - ], - [ - "gene_synonym", - "b1900" - ], - [ - "gene_synonym", - "GeneID:946408" - ] - ], - "dna_sequence": "ATGCAACAGTCTACCCCGTATCTCTCATTTCGCGGCATCGGTAAAACGTTTCCCGGCGTTAAGGCGCTGACGGATATTAGTTTTGACTGCTATGCCGGTCAGGTTCATGCGTTGATGGGTGAAAATGGCGCAGGAAAATCAACTCTCTTAAAAATCCTCAGCGGCAACTATGCGCCAACCACGGGTTCTGTAGTGATTAATGGGCAGGAAATGTCCTTTTCCGACACGACCGCAGCACTTAACGCGGGCGTGGCGATTATTTACCAGGAACTGCATCTCGTGCCGGAAATGACCGTCGCGGAAAACATCTATCTCGGCCAGCTGCCGCATAAAGGCGGCATTGTGAATCGCTCATTGCTGAATTATGAGGCGGGTTTACAACTTAAACATCTTGGTATGGATATTGACCCGGACACGCCGCTGAAATATCTCTCCATTGGTCAGTGGCAGATGGTTGAAATCGCCAAAGCGCTGGCGCGTAACGCCAAAATTATCGCCTTTGATGAGCCAACCAGCTCCCTCTCTGCCCGTGAAATCGACAATCTTTTCCGCGTTATTCGTGAACTGCGAAAAGAGGGGCGGGTAATCTTATACGTTTCTCACCGTATGGAAGAAATATTTGCCCTCAGCGATGCCATTACTGTCTTTAAAGATGGACGTTATGTCAAAACCTTTACCGATATGCAGCAGGTTGACCACGACGCGCTGGTGCAGGCGATGGTCGGGCGCGACATTGGCGATATCTACGGCTGGCAACCGCGTAGTTATGGCGAGGAGCGCCTACGTCTTGATGCTGTGAAAGCACCAGGCGTGCGTACGCCAATAAGTCTGGCGGTTCGCAGTGGTGAAATTGTTGGGCTGTTTGGTCTGGTAGGGGCGGGGCGTAGCGAATTAATGAAAGGCATGTTTGGCGGGACGCAAATCACCGCCGGTCAGGTTTATATCGACCAACAGCCGATCGATATTCGTAAACCGAGCCACGCCATTGCCGCAGGCATGATGCTCTGCCCGGAAGATCGCAAAGCGGAAGGCATTATTCCCGTGCACTCCGTTCGCGACAATATCAACATCAGTGCCAGACGTAAACATGTGCTCGGCGGTTGTGTAATCAACAACGGTTGGGAAGAAAACAATGCCGATCACCACATTCGTTCGCTCAACATCAAAACGCCGGGCGCGGAGCAACTGATCATGAATCTCTCAGGCGGAAATCAGCAAAAAGCCATTCTGGGCCGCTGGTTATCGGAAGAGATGAAGGTCATTTTGCTGGATGAACCTACGCGCGGCATTGATGTTGGCGCTAAGCACGAAATATATAACGTAATTTATGCGCTGGCGGCGCAGGGCGTGGCGGTGCTGTTTGCCTCCAGCGACTTACCTGAAGTCCTCGGCGTTGCCGACCGGATTGTGGTGATGCGGGAAGGTGAAATCGCCGGTGAATTGTTACACGAGCAGGCAGATGAGCGTCAGGCACTGAGCCTTGCGATGCCTAAAGTCAGCCAGGCTGTTGCCTGA", 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"gene_synonym", - "NP_416414.1" - ], - [ - "gene_synonym", - "GI:16129851" - ], - [ - "gene_synonym", - "ECK1899" - ], - [ - "gene_synonym", - "ASAP:ABE-0006330" - ], - [ - "gene_synonym", - "araF" - ], - [ - "gene_synonym", - "b1901" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02924" - ], - [ - "gene_synonym", - "GeneID:946409" - ] - ], - "dna_sequence": "ATGCACAAATTTACTAAAGCCCTGGCAGCCATTGGTCTGGCAGCCGTTATGTCACAATCCGCTATGGCGGAGAACCTGAAGCTCGGTTTTCTGGTGAAGCAACCGGAAGAGCCGTGGTTCCAGACCGAATGGAAGTTTGCCGATAAAGCCGGGAAGGATTTAGGGTTTGAGGTTATTAAGATTGCCGTGCCGGATGGCGAAAAAACATTGAACGCGATCGACAGCCTGGCTGCCAGTGGCGCAAAAGGTTTCGTTATTTGTACTCCGGACCCCAAACTCGGCTCTGCCATCGTCGCGAAAGCGCGTGGCTACGATATGAAAGTCATTGCCGTGGATGACCAGTTTGTTAACGCCAAAGGTAAGCCAATGGATACCGTTCCGCTGGTGATGATGGCGGCGACTAAAATTGGCGAACGTCAGGGCCAGGAACTGTATAAAGAGATGCAGAAACGTGGCTGGGATGTCAAAGAAAGCGCGGTGATGGCGATTACCGCCAACGAACTGGATACCGCCCGCCGCCGTACTACGGGATCTATGGATGCGCTGAAAGCGGCCGGATTCCCGGAAAAACAAATTTATCAGGTACCTACCAAATCTAACGACATCCCGGGGGCATTTGACGCTGCCAACTCAATGCTGGTTCAACATCCGGAAGTTAAACATTGGCTGATCGTCGGTATGAACGACAGCACCGTGCTGGGCGGCGTACGCGCGACGGAAGGTCAGGGCTTTAAAGCGGCCGATATCATCGGCATTGGCATTAACGGTGTGGATGCGGTGAGCGAACTGTCTAAAGCACAGGCAACCGGCTTCTACGGTTCCCTGCTGCCAAGCCCGGACGTACATGGCTATAAATCCAGCGAAATGCTTTACAACTGGGTAGCAAAAGACGTTGAACCGCCAAAATTTACCGAAGTTACCGACGTGGTACTGATCACGCGTGACAACTTTAAAGAAGAACTGGAGAAAAAAGGTTTAGGCGGTAAGTAA", - "dna_sequence_length": 990, - "functions": [ - "L-arabinose ABC transporter periplasmic binding protein" - ], - "id": "CDS_1893", - "location": [ - [ - "NC_000913", - 1986128, - "-", - 990 - ] - ], - "md5": "172125c2d02b068ec2a37d52f75f204e", - "parent_gene": "", - "protein_md5": "a364105b35b80beaabd67a384340fbc1", - "protein_translation": "MHKFTKALAAIGLAAVMSQSAMAENLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKGKPMDTVPLVMMAATKIGERQGQELYKEMQKRGWDVKESAVMAITANELDTARRRTTGSMDALKAAGFPEKQIYQVPTKSNDIPGAFDAANSMLVQHPEVKHWLIVGMNDSTVLGGVRATEGQGFKAADIIGIGINGVDAVSELSKAQATGFYGSLLPSPDVHGYKSSEMLYNWVAKDVEPPKFTEVTDVVLITRDNFKEELEKKGLGGK", - "protein_translation_length": 329, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13175" - ], - [ - "gene_synonym", - "GI:16129852" - ], - [ - "gene_synonym", - "ECK1900" - ], - [ - "gene_synonym", - "ASAP:ABE-0006333" - ], - [ - "gene_synonym", - "GeneID:946407" - ], - [ - "gene_synonym", - "ftnB" - ], - [ - "gene_synonym", - "yecI" - ], - [ - "gene_synonym", - "JW1890" - ], - [ - "gene_synonym", - "NP_416415.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9A2" - ], - [ - "gene_synonym", - "b1902" - ] - ], - "dna_sequence": "ATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAAATGAACCGCGAGTTTTACGCATCCAATCTCTACCTTCACCTGAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAATGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTGAACTCTCTGGAAGAACTGTTCCAAAAAACGATGGAAGAATACGAGCAACGTTCTAGTACGTTGGCACAGTTAGCCGATGAAGCGAAAGAACTGAATGATGATTCAACCGTCAATTTCCTGCGCGATCTGGAAAAAGAACAGCAGCATGATGGTCTGTTGCTGCAAACCATTCTTGATGAAGTGCGCAGTGCGAAACTTGCGGGTATGTGCCCTGTGCAGACCGACCAACATGTTCTGAATGTCGTGTCACACCAGCTGCATTGA", - "dna_sequence_length": 504, - "functions": [ - "ferritin B, putative ferrous iron reservoir" - ], - "id": "CDS_1894", - "location": [ - [ - "NC_000913", - 1986925, - "+", - 504 - ] - ], - "md5": "efa38e2885f454dd6c24307130e270c6", - "parent_gene": "", - "protein_md5": "60dc0244e61b9d9d23b4a68998386248", - "protein_translation": "MATAGMLLKLNSQMNREFYASNLYLHLSNWCSEQSLNGTATFLRAQAQSNVTQMMRMFNFMKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLAQLADEAKELNDDSTVNFLRDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLNVVSHQLH", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13242" - ], - [ - "gene_synonym", - "ASAP:ABE-0285058" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD10" - ], - [ - "gene_synonym", - "GI:94541093" - ], - [ - "gene_synonym", - "ECK1901" - ], - [ - "gene_synonym", - "NP_416416.2" - ], - [ - "gene_synonym", - "yecJ" - ], - [ - "gene_synonym", - "JW1891" - ], - [ - "gene_synonym", - "GeneID:946388" - ], - [ - "gene_synonym", - "b4537" - ] - ], - "dna_sequence": "ATGTCCCAGCCGCTGAATGCCGATCAGGAATTGGTTTCTGATGTGGTTGCTTGCCAGTTGGTTATCAAACAAATTCTGGATGTTCTCGATGTAATCGCGCCCGTTGAAGTTCGTGAAAAAATGTCCAGTCAGCTGAAGAATATCGACTTTACTAACCATCCCGCCGCCGCAGACCCGGTCACCATGCGGGCAATCCAAAAAGCCATCGCGCTTATTGAACTCAAGTTTACCCCACAGGGTGAATCCCATTAA", - "dna_sequence_length": 252, - "functions": [ - "DUF2766 family protein" - ], - "id": "CDS_1895", - "location": [ - [ - "NC_000913", - 1987758, - "-", - 252 - ] - ], - "md5": "86104feedb62e67378b60e3a6a0cd98f", - "parent_gene": "", - "protein_md5": "96c5f61e193689d16bb38315cf420562", - "protein_translation": "MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQLKNIDFTNHPAAADPVTMRAIQKAIALIELKFTPQGESH", - "protein_translation_length": 83, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4478" - ], - [ - "gene_synonym", - "YP_002791245.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P605" - ], - [ - "gene_synonym", - "EcoGene:EG14468" - ], - [ - "gene_synonym", - "GeneID:7751642" - ], - [ - "gene_synonym", - "b4663" - 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"ECK1903" - ], - [ - "gene_synonym", - "JW1892" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76308" - ], - [ - "gene_synonym", - "b1904" - ] - ], - "dna_sequence": "ATGAGACTTCTGATTCTGACTCTTTCATTAATAACGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAGGCTATACCCACGCGGTCCCCTTTGGTCAGCCAGTAGGCAACTGTAGCCTTTTTGCGGGTTCCTTATGTTTGAATACGGAATTCACTTTGTCATATCAGTGCCATCATTCCGCCTTCCCTGTCTTTCTCTAA", - "dna_sequence_length": 324, - "functions": [ - "lipoprotein, function unknown" - ], - "id": "CDS_1897", - "location": [ - [ - "NC_000913", - 1988222, - "+", - 324 - ] - ], - "md5": "c3774d22f23d99f0c53ee4df4eb00967", - "parent_gene": "", - "protein_md5": "e4170bdce39f0873f7e331f8d1d69741", - "protein_translation": "MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQHAHTDRYVSRGIADRACQQEGYTHAVPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSAFPVFL", - "protein_translation_length": 107, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129855" - ], - [ - "gene_synonym", - "ASAP:ABE-0006342" - ], - [ - "gene_synonym", - "gen-165" - ], - [ - "gene_synonym", - "EcoGene:EG10921" - ], - [ - "gene_synonym", - "ftnA" - ], - [ - "gene_synonym", - "JW1893" - ], - [ - "gene_synonym", - "GeneID:946410" - ], - [ - "gene_synonym", - "ECK1904" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A998" - ], - [ - "gene_synonym", - "NP_416418.1" - ], - [ - "gene_synonym", - "b1905" - ], - [ - "gene_synonym", - "rsgA" - ], - [ - "gene_synonym", - "ftn" - ] - ], - "dna_sequence": "ATGCTGAAACCAGAAATGATTGAAAAACTTAATGAGCAGATGAACCTGGAACTGTACTCTTCACTGCTTTATCAGCAAATGAGCGCCTGGTGCAGCTATCATACCTTCGAAGGTGCTGCCGCGTTCCTGCGCCGTCACGCCCAGGAAGAGATGACGCATATGCAGCGTCTGTTTGATTACCTGACTGATACCGGCAATTTACCGCGTATTAATACCGTTGAATCTCCGTTTGCTGAATATTCCTCACTTGATGAATTATTCCAGGAAACCTATAAACACGAACAATTAATCACCCAGAAAATTAACGAACTGGCTCATGCTGCAATGACCAATCAGGACTACCCAACATTTAATTTCCTGCAATGGTATGTTTCTGAGCAGCATGAAGAAGAGAAACTGTTCAAATCGATTATTGATAAATTAAGCCTGGCAGGCAAAAGCGGCGAAGGTCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAA", - "dna_sequence_length": 498, - "functions": [ - "ferritin iron storage protein (cytoplasmic)" - ], - "id": "CDS_1898", - "location": [ - [ - "NC_000913", - 1988716, - "+", - 498 - ] - ], - "md5": "7f9689b76315cd826a8521dd444e5f11", - "parent_gene": "", - "protein_md5": "f280d9f948d7fad2e551a8eb6e58ff3f", - "protein_translation": "MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFAEYSSLDELFQETYKHEQLITQKINELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELSTLDTQN", - "protein_translation_length": 165, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46887" - ], - [ - "gene_synonym", - "yecH" - ], - [ - "gene_synonym", - "ASAP:ABE-0006344" - ], - [ - "gene_synonym", - "GI:16129856" - ], - [ - "gene_synonym", - "JW1894" - ], - [ - "gene_synonym", - "GeneID:946411" - ], - [ - "gene_synonym", - "ECK1905" - ], - [ - "gene_synonym", - "EcoGene:EG12863" - ], - [ - "gene_synonym", - "NP_416419.1" - ], - [ - "gene_synonym", - "b1906" - ] - ], - "dna_sequence": "ATGGACTCTATTCACGGTCATGAAGTGTTAAATATGATGATTGAATCAGGCGAGCAATATACGCATGCCAGTCTGGAAGCTGCGATTAAAGCGCGTTTTGGTGAACAGGCACGTTTTCACACCTGCTCGGCAGAAGGGATGACAGCGGGAGAGCTGGTAGCGTTTCTGGCAGCAAAAGGCAAATTTATACCTTCGAAAGACGGTTTTTCGACCGATCAGAGTAAGATTTGCCGTCACTGA", - "dna_sequence_length": 240, - "functions": [ - "DUF2492 family protein" - ], - "id": "CDS_1899", - "location": [ - [ - "NC_000913", - 1989490, - "-", - 240 - ] - ], - "md5": "204b153881d43eeda19dd7c9e7a56caa", - "parent_gene": "", - "protein_md5": "0ca31361ad5abd23b7ccc7dfed48a278", - "protein_translation": "MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSAEGMTAGELVAFLAAKGKFIPSKDGFSTDQSKICRH", - "protein_translation_length": 79, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tyrP" - ], - [ - "gene_synonym", - "GI:16129857" - ], - [ - "gene_synonym", - "JW1895" - ], - [ - "gene_synonym", - "ASAP:ABE-0006355" - ], - [ - "gene_synonym", - "ECK1906" - ], - [ - "gene_synonym", - "EcoGene:EG11041" - ], - [ - "gene_synonym", - "GeneID:946412" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAD4" - ], - [ - "gene_synonym", - "NP_416420.1" - ], - [ - "gene_synonym", - "b1907" - ] - ], - "dna_sequence": "GTGAAAAACAGAACCCTGGGAAGTGTTTTTATCGTGGCGGGAACCACAATTGGCGCAGGCATGCTGGCAATGCCGCTGGCTGCGGCCGGTGTTGGTTTTAGCGTTACGTTAATCTTGTTGATTGGGCTTTGGGCGTTGATGTGCTACACGGCGCTATTACTGCTGGAGGTGTACCAGCATGTTCCGGCAGATACCGGTCTGGGCACGCTGGCAAAACGCTATCTGGGACGCTACGGTCAATGGCTGACGGGCTTCAGTATGATGTTCTTAATGTATGCTCTGACTGCGGCATACATCAGCGGTGCCGGTGAATTGTTGGCCTCCAGCATCAGCGACTGGACAGGTATTTCTATGTCGGCAACCGCTGGCGTGCTGTTGTTCACTTTTGTTGCCGGTGGCGTGGTTTGTGTCGGAACTTCACTGGTCGATTTATTTAACCGTTTTCTGTTCAGCGCCAAGATTATTTTTCTGGTGGTAATGCTGGTACTACTGCTGCCGCATATTCACAAAGTGAATCTTTTAACCCTGCCGTTGCAACAGGGGCTGGCTCTGTCTGCAATCCCGGTGATTTTTACGTCGTTTGGTTTTCACGGTAGCGTGCCGAGTATTGTCAGCTATATGGATGGCAACATTCGTAAGCTACGCTGGGTGTTTATAATCGGTAGTGCGATCCCCCTGGTGGCATATATTTTCTGGCAGGTGGCGACGCTTGGCAGCATTGATTCAACAACCTTTATGGGATTGCTGGCTAATCATGCTGGATTAAACGGGCTGTTACAGGCGTTACGCGAAATGGTGGCCTCTCCGCATGTTGAGCTGGCAGTGCATTTATTTGCTGATTTAGCCCTCGCCACGTCATTTCTCGGCGTTGCGTTAGGCTTATTTGATTATCTGGCTGATTTATTTCAGCGTTCAAATACCGTTGGTGGACGGTTGCAAACTGGTGCAATTACGTTTCTGCCGCCGTTGGCGTTTGCACTGTTTTATCCACGAGGATTTGTGATGGCGCTGGGTTACGCCGGTGTGGCGCTGGCGGTACTGGCATTGATTATCCCTTCGCTGTTGACCTGGCAAAGCAGAAAGCACAATCCTCAGGCGGGTTACCGGGTCAAAGGTGGTCGTCCGGCGCTGGTGGTGGTGTTTCTCTGTGGTATTGCTGTGATTGGCGTGCAATTTTTGATTGCGGCAGGGTTGTTACCAGAAGTGGGGTGA", 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"gene_synonym", - "b1908" - ], - [ - "gene_synonym", - "ECK1907" - ], - [ - "gene_synonym", - "ASAP:ABE-0006357" - ], - [ - "gene_synonym", - "NP_416421.1" - ], - [ - "gene_synonym", - "EcoGene:EG11139" - ], - [ - "gene_synonym", - "yecA" - ] - ], - "dna_sequence": "ATGAAAACGGGACCGTTAAACGAAAGTGAGTTGGAATGGCTGGACGATATTCTGACCAAATACAACACTGACCACGCCATCCTTGATGTGGCGGAGCTGGACGGTTTATTGACGGCGGTGTTGAGTTCTCCGCAAGAGATTGAACCGGAACAGTGGCTGGTTGCCGTGTGGGGTGGGGCTGACTATGTGCCGCGCTGGGCGTCAGAGAAAGAGATGACGCGCTTTATGAATCTGGCTTTTCAACATATGGCCGATACCGCAGAGCGTCTGAACGAATTCCCGGAGCAGTTTGAGCCGTTATTCGGCTTGCGAGAAGTTGATGGCAGCGAGCTGACGATTGTTGAGGAGTGGTGCTTTGGCTATATGCGGGGCGTGGCACTTTCTGACTGGTCAACGTTGCCCGATTCGTTAAAACCAGCGCTGGAGGCGATTGCGCTGCACGGTACTGAGGAAAACTTCGAGCGGGTAGAAAAGATGTCGCCAGAAGCGTTTGAAGAGAGCGTAGATGCCATTCGACTGGCGGCGCTTGATCTACATGCGTACTGGATGGCGCATCCGCAGGAAAAAGCTGTTCAGCAACCGATCAAAGCAGAAGAGAAACCGGGGCGTAACGATCCTTGCCCGTGCGGTAGTGGTAAGAAATTTAAGCAGTGCTGCCTGCATTAA", - "dna_sequence_length": 666, - "functions": [ - "UPF0149 family 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"dna_sequence": "ATGCAATTTAATATCCCTACGTTGCTTACACTGTTCCGTGTCATCCTTATCCCATTCTTTGTATTGGTCTTTTATCTGCCTGTCACCTGGTCGCCGTTTGCCGCCGCGCTCATTTTCTGCGTCGCGGCGGTGACTGACTGGTTCGATGGTTTTCTGGCACGCCGCTGGAACCAGAGTACCCGGTTTGGTGCTTTCCTTGACCCTGTGGCAGATAAAGTTCTCGTGGCTATCGCCATGGTGCTGGTAACCGAGCATTATCACAGCTGGTGGGTGACATTACCGGCGGCAACGATGATCGCCCGTGAAATTATTATTTCTGCGCTACGCGAATGGATGGCGGAGTTGGGTAAACGCAGTAGCGTGGCCGTCTCCTGGATTGGGAAAGTGAAAACCACTGCCCAGATGGTGGCGTTGGCATGGCTGCTGTGGCGTCCGAACATTTGGGTTGAGTACGCCGGTATTGCACTTTTCTTTGTGGCTGCGGTACTGACTCTGTGGTCAATGTTGCAATATTTGAGCGCTGCGCGTGCAGATTTGCTTGATCAGTGA", - "dna_sequence_length": 549, - "functions": [ - "phosphatidylglycerophosphate synthetase" - ], - "id": "CDS_1902", - "location": [ - [ - "NC_000913", - 1992817, - "-", - 549 - ] - ], - "md5": "e7feb15592fba2d30768e64f1efca418", - "parent_gene": "", - "protein_md5": "a52a7859fbfd934bc77137489798d420", - "protein_translation": "MQFNIPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAVTDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIAREIIISALREWMAELGKRSSVAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVAAVLTLWSMLQYLSAARADLLDQ", - "protein_translation_length": 182, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006370" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8G0" - ], - [ - "gene_synonym", - "NP_416423.4" - ], - [ - "gene_synonym", - "ECK1912" - ], - [ - "gene_synonym", - "GeneID:947203" - ], - [ - "gene_synonym", - "b1913" - ], - [ - "gene_synonym", - "EcoGene:EG11063" - ], - [ - "gene_synonym", - "JW1898" - ], - [ - "gene_synonym", - "uvrC" - ], - [ - "gene_synonym", - "GI:90111354" - ] - ], - "dna_sequence": "GTGAGTGATCAGTTTGACGCAAAAGCGTTTTTAAAAACCGTAACCAGCCAGCCAGGCGTTTATCGCATGTACGATGCTGGTGGTACGGTTATCTATGTCGGCAAAGCGAAAGACCTGAAAAAACGGCTTTCCAGCTATTTCCGTAGCAACCTCGCTTCGCGCAAAACCGAAGCGCTGGTCGCCCAGATCCAGCAAATTGATGTAACGGTTACTCACACAGAAACCGAAGCGCTGTTGCTGGAACACAACTACATCAAACTCTATCAGCCGCGTTACAACGTTTTGCTACGCGATGATAAATCATATCCTTTTATCTTCCTGAGTGGTGATACCCACCCGCGTCTGGCGATGCATCGTGGTGCGAAGCATGCCAAAGGTGAATATTTCGGCCCGTTCCCGAATGGCTATGCCGTACGTGAAACACTGGCGCTACTGCAAAAGATTTTCCCCATTCGCCAGTGCGAAAATAGTGTTTATCGCAATCGCTCGCGTCCGTGTCTGCAATACCAGATAGGGCGCTGTCTGGGACCGTGCGTTGAAGGACTGGTGAGTGAAGAAGAATACGCTCAGCAGGTCGAGTATGTGCGCCTGTTTTTGTCTGGCAAAGATGATCAGGTGCTTACGCAACTCATTAGTCGTATGGAAACTGCCAGCCAGAATCTGGAGTTTGAAGAAGCTGCACGTATTCGCGACCAAATTCAGGCGGTGCGACGCGTCACCGAAAAACAATTCGTTTCCAATACCGGCGACGACCTCGACGTTATTGGTGTGGCGTTCGATGCGGGCATGGCTTGTGTCCACGTATTGTTCATTCGTCAGGGCAAAGTGCTCGGCAGCCGCAGCTATTTCCCGAAAGTGCCTGGCGGTACGGAACTGAGCGAGGTGGTAGAAACCTTCGTAGGCCAGTTCTATTTACAAGGCAGCCAGATGCGCACCTTACCGGGTGAGATCCTGCTCGATTTTAATCTTAGCGATAAAACGCTGCTCGCCGATTCCCTTTCAGAACTGGCGGGACGCAAGATTAATGTTCAAACCAAACCTCGCGGCGATAGGGCGCGTTATCTGAAACTCGCGCGCACCAATGCGGCGACGGCCTTAACCAGCAAACTTTCGCAGCAATCTACCGTTCACCAGCGACTGACCGCGCTTGCCAGCGTGTTGAAATTGCCGGAAGTGAAGCGGATGGAGTGCTTTGACATCAGCCATACCATGGGCGAACAAACCGTCGCTTCCTGTGTGGTGTTTGATGCTAACGGCCCGCTGCGTGCGGAGTATCGGCGCTATAACATTACAGGCATCACGCCGGGCGATGATTATGCGGCGATGAATCAGGTGCTGCGTCGGCGTTATGGTAAAGCCATTGACGACAGTAAGATCCCGGATGTGATCCTTATCGACGGCGGCAAAGGCCAGCTTGCGCAGGCGAAAAATGTCTTCGCCGAACTGGATGTCTCATGGGATAAAAATCATCCGCTGCTACTTGGCGTTGCCAAAGGAGCAGATCGTAAGGCTGGACTGGAAACGCTGTTCTTTGAGCCGGAAGGTGAGGGATTTAGTTTGCCGCCAGATTCACCCGCGCTGCATGTTATCCAGCATATTCGCGATGAATCACATGATCACGCGATTGGCGGGCACCGTAAAAAACGGGCGAAGGTCAAAAATACCAGTTCCCTGGAAACCATTGAAGGCGTCGGGCCAAAACGTCGGCAAATGTTGTTGAAATATATGGGCGGTTTGCAAGGTTTACGTAACGCCAGCGTCGAGGAAATTGCAAAAGTGCCGGGTATTTCGCAAGGTCTGGCAGAAAAGATCTTCTGGTCGTTGAAACATTGA", 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}, - { - "aliases": [ - [ - "gene_synonym", - "sirA" - ], - [ - "gene_synonym", - "EcoGene:EG11140" - ], - [ - "gene_synonym", - "uvrY" - ], - [ - "gene_synonym", - "GeneID:946424" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AED5" - ], - [ - "gene_synonym", - "NP_416424.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006373" - ], - [ - "gene_synonym", - "b1914" - ], - [ - "gene_synonym", - "ECK1913" - ], - [ - "gene_synonym", - "gacA" - ], - [ - "gene_synonym", - "yecB" - ], - [ - "gene_synonym", - "JW1899" - ], - [ - "gene_synonym", - "GI:16129861" - ] - ], - "dna_sequence": "TTGATCAACGTTCTACTTGTTGATGACCACGAACTGGTGCGCGCAGGGATACGACGCATTCTGGAAGATATAAAGGGTATAAAAGTCGTCGGTGAGGCATCGTGCGGTGAAGACGCCGTTAAGTGGTGCCGGACAAATGCCGTTGACGTGGTGCTAATGGACATGAGTATGCCGGGCATTGGCGGTCTTGAGGCGACGCGTAAAATCGCGCGTTCCACAGCTGATGTCAAAATCATCATGCTTACCGTCCATACAGAAAACCCTTTACCAGCGAAAGTCATGCAGGCCGGTGCTGCGGGCTACCTCAGCAAAGGCGCGGCTCCGCAGGAAGTCGTGAGTGCGATTCGTTCTGTCTATTCAGGGCAGCGTTACATTGCTTCTGACATCGCTCAACAAATGGCGTTAAGCCAGATCGAACCAGAAAAAACAGAAAGCCCATTTGCCAGTTTGTCTGAACGTGAATTGCAGATTATGCTGATGATCACCAAGGGCCAGAAGGTCAATGAGATCTCAGAACAGCTCAATCTCAGTCCGAAAACGGTGAACAGCTACCGCTATCGTATGTTCAGTAAACTAAACATTCATGGCGATGTTGAGCTGACTCACCTGGCAATTCGCCATGGTCTGTGTAATGCGGAGACATTATCAAGTCAGTGA", - "dna_sequence_length": 657, - "functions": [ - "response regulator in two-component regulatory system with BarA" - ], - "id": "CDS_1904", - "location": [ - [ - "NC_000913", - 1995359, - "-", - 657 - ] - ], - "md5": "523106f0f24232c7d03499bfac2164e0", - "parent_gene": "", - "protein_md5": "4419228249595b504902b9c906a66263", - "protein_translation": "MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYLSKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ", - "protein_translation_length": 218, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD07" - ], - [ - "gene_synonym", - "ASAP:ABE-0006379" - ], - [ - "gene_synonym", - "GeneID:946420" - ], - [ - "gene_synonym", - "EcoGene:EG12861" - ], - [ - "gene_synonym", - "ECK1914" - ], - [ - "gene_synonym", - "GI:16129862" - ], - [ - "gene_synonym", - "JW1900" - ], - [ - "gene_synonym", - "yecF" - ], - [ - "gene_synonym", - "NP_416425.1" - ], - [ - "gene_synonym", - "b1915" - ] - ], - "dna_sequence": "ATGAGTACGCCTGATTTTTCTACTGCCGAGAATAATCAAGAACTGGCAAATGAAGTCTCCTGCCTGAAAGCGATGCTGACGCTGATGCTGCAGGCGATGGGACAAGCTGACGCGGGCCGCGTGATGTTAAAGATGGAAAAACAGCTTGCGCTGATCGAAGACGAAACCCAGGCTGCAGTATTTTCCAAAACGGTTAAGCAAATTAAACAAGCCTACCGTCAGTAA", - "dna_sequence_length": 225, - "functions": [ - "DUF2594 family protein" - ], - "id": "CDS_1905", - "location": [ - [ - "NC_000913", - 1995818, - "+", - 225 - ] - ], - "md5": "52b8a6689d1481b40b4d2fe013d10fa5", - "parent_gene": "", - "protein_md5": "33fb3d053aad10fe4b94b1aac17a4bd1", - "protein_translation": "MSTPDFSTAENNQELANEVSCLKAMLTLMLQAMGQADAGRVMLKMEKQLALIEDETQAAVFSKTVKQIKQAYRQ", - "protein_translation_length": 74, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07026" - ], - [ - "gene_synonym", - "NP_416426.1" - ], - [ - "gene_synonym", - "uvrX" - ], - [ - "gene_synonym", - "EcoGene:EG10935" - ], - [ - "gene_synonym", - "ASAP:ABE-0006381" - ], - [ - "gene_synonym", - "GeneID:946421" - ], - [ - "gene_synonym", - "ECK1915" - ], - [ - "gene_synonym", - "GI:16129863" - ], - [ - "gene_synonym", - "JW1901" - ], - [ - "gene_synonym", - "b1916" - ], - [ - "gene_synonym", - "sdiA" - ] - ], - "dna_sequence": "ATGCAGGATAAGGATTTTTTCAGCTGGCGTCGCACGATGCTGTTGCGTTTTCAGAGGATGGAGACCGCAGAAGAGGTCTACCATGAAATTGAGCTTCAGGCTCAGCAGCTGGAGTACGATTACTATTCGTTATGTGTCCGCCACCCGGTACCATTCACTCGACCTAAAGTGGCTTTTTACACCAATTACCCTGAGGCGTGGGTTAGTTATTATCAGGCAAAAAACTTTCTCGCAATTGATCCGGTGCTGAACCCTGAAAACTTTAGTCAGGGCCATTTAATGTGGAATGATGACTTATTCAGCGAAGCACAGCCGTTATGGGAAGCCGCGCGCGCACATGGTTTACGCCGCGGTGTCACTCAGTATTTAATGCTGCCAAACCGGGCGCTGGGCTTTTTGTCCTTTTCCCGTTGCAGCGCGCGCGAAATACCCATTCTTAGTGATGAACTGCAATTAAAAATGCAGTTACTGGTGCGCGAAAGTCTGATGGCTCTGATGCGTTTAAATGATGAAATAGTGATGACGCCAGAGATGAATTTCAGCAAGCGCGAAAAAGAAATTCTGAGGTGGACGGCGGAAGGGAAAACATCAGCAGAGATAGCGATGATTTTGTCAATCTCTGAGAATACGGTCAATTTCCACCAGAAAAACATGCAGAAAAAAATTAATGCACCAAATAAGACCCAGGTTGCCTGTTACGCGGCCGCTACTGGCTTAATTTGA", - "dna_sequence_length": 723, - "functions": [ - "quorum-sensing transcriptional activator" - ], - "id": "CDS_1906", - "location": [ - [ - "NC_000913", - 1996832, - "-", - 723 - ] - ], - "md5": "c9bebefb66c32e46bb4bca7a0cd693c9", - "parent_gene": "", - "protein_md5": "a531d470212bfc47b81c8744bcc1a2b0", - "protein_translation": "MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI", - "protein_translation_length": 240, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37774" - ], - [ - "gene_synonym", - "ASAP:ABE-0006384" - ], - [ - "gene_synonym", - "EcoGene:EG12347" - ], - [ - "gene_synonym", - "GeneID:946422" - ], - [ - "gene_synonym", - "NP_416427.1" - ], - [ - "gene_synonym", - "GI:16129864" - ], - [ - "gene_synonym", - "ECK1916" - ], - [ - "gene_synonym", - "JW1902" - ], - [ - "gene_synonym", - "yecC" - ], - [ - "gene_synonym", - "b1917" - ] - ], - "dna_sequence": "ATGAGTGCCATTGAAGTTAAGAACCTGGTGAAAAAATTCCACGGTCAGACGGTGCTGCACGGTATCGACCTTGAGGTAAAGCCTGGCGAAGTGGTGGCAATTATCGGTCCGAGTGGTTCCGGCAAAACCACGTTGCTACGCAGCATAAATCTGCTGGAACAACCCGAAGCGGGAACGATCACCGTTGGCGATATCACTATTGATACTGCACGTTCATTAAGTCAGCAAAAATCTCTGATTCGCCAGTTGCGTCAGCACGTCGGGTTTGTCTTCCAGAACTTTAATTTGTTTCCGCATCGTACGGTGCTGGAGAACATTATTGAAGGGCCGGTGATCGTCAAAGGTGAACCGAAAGAAGAGGCCACGGCGCGCGCTCGCGAGCTGCTGGCAAAAGTTGGGCTGGCAGGTAAAGAAACCAGCTATCCACGTCGTTTGTCTGGCGGTCAACAGCAGCGTGTTGCGATTGCGCGTGCGCTGGCAATGCGTCCTGAGGTGATTTTGTTTGACGAGCCAACGTCAGCGCTGGATCCAGAGCTGGTGGGTGAAGTCCTGAACACCATCCGTCAGCTGGCGCAGGAAAAGCGCACGATGGTGATTGTGACGCACGAAATGAGCTTTGCCCGGGATGTTGCGGACCGGGCGATCTTTATGGACCAGGGGCGGATAGTCGAGCAGGGGGCCGCAAAAGCGTTATTTGCCGACCCCGAGCAGCCTCGCACCCGCCAGTTCCTCGAGAAGTTTCTGCTGCAATAA", - "dna_sequence_length": 753, - "functions": [ - "putative ABC transporter ATPase" - ], - "id": "CDS_1907", - "location": [ - [ - "NC_000913", - 1997814, - "-", - 753 - ] - ], - "md5": "18ee38e9138394676d1bb3ab54203bd8", - "parent_gene": "", - "protein_md5": "160c5bd606a9db420ee91378c8c1c5f4", - "protein_translation": "MSAIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGAAKALFADPEQPRTRQFLEKFLLQ", - "protein_translation_length": 250, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFT2" - ], - [ - "gene_synonym", - "NP_416428.1" - ], - [ - "gene_synonym", - "EcoGene:EG14037" - ], - [ - "gene_synonym", - "ASAP:ABE-0006386" - ], - [ - "gene_synonym", - "yecS" - ], - [ - "gene_synonym", - "ECK1917" - ], - [ - "gene_synonym", - "GI:16129865" - ], - [ - "gene_synonym", - "b1918" - ], - [ - "gene_synonym", - "GeneID:949105" - ], - [ - "gene_synonym", - "JW1903" - ] - ], - "dna_sequence": "ATGCAAGAAAGTATACAACTGGTTATTGATTCCTTGCCGTTCCTGCTGAAAGGGGCTGGGTATACGCTGCAACTCAGTATCGGCGGCATGTTTTTTGGCTTACTGCTCGGGTTTATTCTCGCGCTGATGCGTCTGTCGCCAATCTGGCCCGTGCGCTGGCTGGCGCGTTTTTATATCTCTATTTTTCGTGGTACGCCGCTCATCGCACAACTGTTTATGATCTATTACGGCCTGCCGCAGTTTGGTATCGAATTAGATCCCATTCCGTCAGCAATGATTGGTCTGTCGTTGAACACTGCCGCCTATGCTGCCGAAACGCTGCGCGCCGCCATTTCTTCTATTGATAAAGGTCAGTGGGAAGCGGCAGCCAGTATTGGTATGACGCCGTGGCAGACCATGCGTCGCGCGATTTTGCCACAGGCGGCGCGTGTGGCGTTGCCGCCGCTGTCGAACAGCTTTATTAGCCTGGTAAAAGATACGTCGCTGGCCGCGACAATCCAGGTGCCGGAGCTGTTCCGTCAGGCGCAGTTGATTACCTCGCGTACGCTGGAGGTGTTCACCATGTATCTGGCGGCTTCGCTCATCTACTGGATCATGGCGACTGTGTTATCGACGTTGCAGAACCATTTTGAGAATCAACTTAATCGCCAGGAGAGAGAACCAAAATGA", - "dna_sequence_length": 669, - "functions": [ - "ABC family putative inner membrane permease" - ], - "id": "CDS_1908", - "location": [ - [ - "NC_000913", - 1998479, - "-", - 669 - ] - ], - "md5": "c798cb6daee2f7aac4cf1c64e03c85d6", - "parent_gene": "", - "protein_md5": "ccfb4a7497fbd98dafee3c38a9c78618", - "protein_translation": "MQESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQEREPK", - "protein_translation_length": 222, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yedO" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76316" - ], - [ - "gene_synonym", - "NP_416429.4" - ], - [ - "gene_synonym", - "GeneID:946831" - ], - [ - "gene_synonym", - "EcoGene:EG14038" - ], - [ - "gene_synonym", - "b1919" - ], - [ - "gene_synonym", - "ASAP:ABE-0006389" - ], - [ - "gene_synonym", - "JW5313" - ], - [ - "gene_synonym", - "dcyD" - ], - [ - "gene_synonym", - "ECK1918" - ], - [ - "gene_synonym", - "GI:90111355" - ] - ], - "dna_sequence": "ATGCCACTGCATAATTTAACCCGTTTTCCACGGCTGGAGTTTATCGGCGCGCCAACGCCGCTCGAATATCTGCCGCGCTTTTCTGATTATCTAGGACGGGAAATTTTCATCAAACGGGATGACGTCACCCCCATGGCAATGGGCGGCAATAAATTACGTAAGCTGGAATTTCTCGCGGCAGATGCTCTGCGTGAAGGTGCCGATACGCTGATTACTGCCGGGGCGATCCAGTCTAACCATGTGCGGCAGACTGCCGCAGTCGCTGCCAAACTCGGTCTGCACTGCGTGGCGCTGCTGGAAAATCCTATTGGCACAACCGCAGAAAACTATTTAACCAACGGCAATCGCTTGTTGCTGGATCTGTTCAATACCCAGATTGAAATGTGCGACGCACTGACCGATCCCAATGCCCAACTGGAAGAGCTGGCGACGCGAGTCGAAGCACAAGGCTTTCGCCCGTATGTCATTCCGGTTGGCGGTTCTAATGCTCTTGGCGCGCTAGGTTATGTGGAGAGTGCGCTGGAAATCGCGCAACAGTGTGAAGGGGCGGTTAATATTTCATCGGTGGTAGTCGCATCGGGCAGTGCCGGAACTCACGCCGGACTGGCTGTTGGGCTGGAACACCTGATGCCTGAAAGCGAACTGATTGGCGTGACCGTGTCGCGTTCCGTTGCCGATCAATTGCCGAAAGTGGTTAACCTACAACAGGCGATTGCGAAAGAACTGGAGCTGACCGCATCAGCGGAAATTTTACTCTGGGATGACTATTTTGCACCTGGCTACGGCGTGCCGAACGACGAAGGCATGGAAGCAGTGAAATTGCTGGCGCGGCTGGAAGGCATTCTGCTTGATCCTGTGTATACCGGAAAAGCGATGGCGGGGCTGATTGACGGTATCAGTCAGAAACGCTTCAAAGATGAAGGGCCGATTCTGTTTATTCATACCGGCGGTGCGCCTGCGCTGTTCGCCTATCATCCCCACGTTTAG", - "dna_sequence_length": 987, - "functions": [ - "D-cysteine desulfhydrase, PLP-dependent" - ], - "id": "CDS_1909", - "location": [ - [ - "NC_000913", - 1999480, - "-", - 987 - ] - ], - "md5": "0cf1ccbe976f29bad821dcdc2b801452", - "parent_gene": "", - "protein_md5": "5915fd294adc50bead12c662ce0d2e54", - "protein_translation": "MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAKELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPALFAYHPHV", - "protein_translation_length": 328, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "fliY" - ], - [ - "gene_synonym", - "b1920" - ], - [ - "gene_synonym", - "ASAP:ABE-0006392" - ], - [ - "gene_synonym", - "ECK1919" - ], - [ - "gene_synonym", - "NP_416430.1" - ], - [ - "gene_synonym", - "EcoGene:EG12680" - ], - [ - "gene_synonym", - "yzzR" - ], - [ - "gene_synonym", - "GeneID:948833" - ], - [ - "gene_synonym", - "GI:16129867" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEM9" - ], - [ - "gene_synonym", - "JW1905" - ] - ], - "dna_sequence": "ATGAAATTAGCACATCTGGGACGTCAGGCATTGATGGGTGTGATGGCCGTGGCGCTGGTTGCGGGCATGAGCGTTAAAAGTTTTGCAGATGAAGGTCTGCTTAATAAAGTTAAAGAGCGCGGCACGCTGCTGGTAGGGCTGGAAGGAACTTATCCGCCGTTCAGTTTTCAGGGAGATGACGGCAAATTAACCGGTTTTGAAGTGGAATTTGCCCAACAGCTGGCAAAACATCTTGGCGTTGAGGCGTCACTAAAACCGACCAAATGGGACGGTATGCTGGCGTCGCTGGACTCTAAACGTATTGATGTGGTGATTAATCAGGTCACCATTTCTGATGAGCGCAAGAAAAAATACGATTTCTCAACCCCGTACACCATTTCTGGTATTCAGGCGCTGGTGAAAAAAGGTAACGAAGGCACCATTAAAACAGCCGATGATCTGAAAGGCAAAAAAGTGGGGGTCGGTCTGGGCACCAACTATGAAGAGTGGCTGCGGCAGAATGTTCAGGGCGTCGATGTGCGTACCTATGATGATGACCCGACCAAATATCAGGATCTGCGCGTAGGGCGTATCGATGCGATCCTCGTTGATCGTCTGGCGGCGCTGGATCTGGTGAAGAAAACCAACGATACGCTGGCAGTAACCGGTGAAGCATTCTCCCGTCAGGAGTCTGGCGTGGCGCTGCGTAAAGGAAATGAGGACCTGCTGAAAGCAGTGAATGATGCAATTGCGGAAATGCAAAAAGATGGCACTCTGCAAGCCCTTTCCGAAAAATGGTTTGGTGCTGATGTGACCAAATAA", - "dna_sequence_length": 801, - "functions": [ - "cystine transporter subunit" - ], - "id": "CDS_1910", - "location": [ - [ - "NC_000913", - 2000385, - "-", - 801 - ] - ], - "md5": "485f77c7b87d0f3c8eedcbd63414e4b3", - "parent_gene": "", - "protein_md5": "da092854e06ff8159d9667c957de75b0", - "protein_translation": "MKLAHLGRQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDLRVGRIDAILVDRLAALDLVKKTNDTLAVTGEAFSRQESGVALRKGNEDLLKAVNDAIAEMQKDGTLQALSEKWFGADVTK", - "protein_translation_length": 266, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11356" - ], - [ - "gene_synonym", - "GeneID:946833" - ], - [ - "gene_synonym", - "b1921" - ], - [ - "gene_synonym", - "yedH" - ], - [ - "gene_synonym", - "fliZ" - ], - [ - "gene_synonym", - "ECK1920" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52627" - ], - [ - "gene_synonym", - "NP_416431.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0006394" - ], - [ - "gene_synonym", - "GI:90111356" - ], - [ - "gene_synonym", - "JW1906" - ] - ], - "dna_sequence": "ATGATGGTGCAGCACCTGAAAAGACGGCCATTAAGCCGCTATCTTAAAGACTTTAAACACAGCCAGACCCATTGCGCGCATTGCCGTAAATTACTCGATCGCATTACCTTAGTTCGCGACGGCAAAATAGTGAATAAAATCGAGATTTCCCGCCTGGACACGCTGCTTGATGAAAATGGCTGGCAAACGGAACAAAAATCATGGGCGGCATTGTGCCGATTTTGCGGTGATTTACATTGCAAAACGCAGAGTGATTTTTTCGATATTATCGGCTTTAAGCAATTTCTTTTTGAGCAAACTGAAATGAGCCCAGGTACGGTGCGTGAATATGTCGTTCGTTTGCGCCGTTTGGGGAATCATCTACACGAGCAAAATATTTCCCTCGATCAGCTGCAGGACGGTTTCCTTGATGAAATCCTCGCCCCGTGGCTGCCCACCACCAGCACCAACAATTACCGCATCGCGTTACGGAAGTATCAACACTATCAGCGCCAAACCTGTACCAGACTTGTGCAGAAATCCTCCAGCCTGCCTTCTTCTGATATATATTAA", - "dna_sequence_length": 552, - "functions": [ - "RpoS antagonist", - "putative regulator of FliA activity" - ], - "id": "CDS_1911", - "location": [ - [ - "NC_000913", - 2001024, - "-", - 552 - ] - ], - "md5": "8e51ee4bbabdd904f7c5812dca1ccc72", - "parent_gene": "", - "protein_md5": "79fa884d88f90b5215c9375b9faf1cfb", - "protein_translation": "MMVQHLKRRPLSRYLKDFKHSQTHCAHCRKLLDRITLVRDGKIVNKIEISRLDTLLDENGWQTEQKSWAALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEMSPGTVREYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTSTNNYRIALRKYQHYQRQTCTRLVQKSSSLPSSDIY", - "protein_translation_length": 183, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11355" - ], - [ - "gene_synonym", - "b1922" - ], - [ - "gene_synonym", - "ECK1921" - ], - [ - "gene_synonym", - "GeneID:948824" - ], - [ - "gene_synonym", - "ASAP:ABE-0006396" - ], - [ - "gene_synonym", - "GI:49176170" - ], - [ - "gene_synonym", - "flaD" - ], - [ - "gene_synonym", - "rpoF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEM6" - ], - [ - "gene_synonym", - "NP_416432.3" - ], - [ - "gene_synonym", - "fliA" - ], - [ - "gene_synonym", - "JW1907" - ] - ], - "dna_sequence": "GTGAATTCACTCTATACCGCTGAAGGTGTAATGGATAAACACTCGCTGTGGCAGCGTTATGTCCCGCTGGTGCGTCACGAAGCATTGCGCCTGCAGGTTCGACTGCCCGCGAGCGTGGAACTTGACGATCTGCTACAGGCGGGCGGCATTGGGTTACTTAATGCCGTCGAACGCTATGACGCCCTACAAGGAACGGCATTTACAACTTACGCAGTGCAGCGTATCCGTGGCGCTATGCTGGATGAACTTCGCAGCCGTGACTGGGTGCCGCGCAGCGTGCGACGCAACGCGCGTGAAGTGGCACAGGCAATAGGGCAACTGGAGCAGGAACTTGGCCGCAACGCCACGGAAACTGAGGTAGCGGAACGTTTAGGGATCGATATTGCCGATTATCGCCAAATGTTGCTCGACACCAATAACAGCCAGCTCTTCTCCTACGATGAGTGGCGCGAAGAGCACGGCGATAGCATCGAACTGGTTACTGATGATCATCAGCGAGAAAACCCGCTACAACAACTACTGGACAGTAATCTGCGCCAGCGGGTGATGGAAGCCATCGAAACGTTGCCGGAGCGCGAAAAACTGGTATTAACCCTCTATTACCAGGAAGAGCTGAATCTCAAAGAGATTGGCGCGGTGCTGGAGGTCGGGGAATCGCGGGTCAGTCAGTTACACAGCCAGGCTATTAAACGGTTACGCACTAAACTGGGTAAGTTATAA", - "dna_sequence_length": 720, - "functions": [ - "RNA polymerase, sigma 28 (sigma F) factor" - ], - "id": "CDS_1912", - "location": [ - [ - "NC_000913", - 2001789, - "-", - 720 - ] - ], - "md5": "7b38cdcae9fe8a1fb52935aadadfb136", - "parent_gene": "", - "protein_md5": "e26f6933b9e42c011e91fa191d68775e", - "protein_translation": "MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYDALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEVAERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDSNLRQRVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL", - "protein_translation_length": 239, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1923" - ], - [ - "gene_synonym", - "GeneID:949101" - ], - [ - "gene_synonym", - "H" - ], - [ - "gene_synonym", - "ECK1922" - ], - [ - "gene_synonym", - "EcoGene:EG10321" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04949" - ], - [ - "gene_synonym", - "hag" - ], - [ - "gene_synonym", - "JW1908" - ], - [ - "gene_synonym", - "flaF" - ], - [ - "gene_synonym", - "GI:16129870" - ], - [ - "gene_synonym", - "ASAP:ABE-0006402" - ], - [ - "gene_synonym", - "NP_416433.1" - ], - [ - "gene_synonym", - "fliC" - ] - ], - "dna_sequence": "ATGGCACAAGTCATTAATACCAACAGCCTCTCGCTGATCACTCAAAATAATATCAACAAGAACCAGTCTGCGCTGTCGAGTTCTATCGAGCGTCTGTCTTCTGGCTTGCGTATTAACAGCGCGAAGGATGACGCAGCGGGTCAGGCGATTGCTAACCGTTTCACCTCTAACATTAAAGGCCTGACTCAGGCGGCCCGTAACGCCAACGACGGTATCTCCGTTGCGCAGACCACCGAAGGCGCGCTGTCCGAAATCAACAACAACTTACAGCGTGTGCGTGAACTGACGGTACAGGCCACTACCGGTACTAACTCTGAGTCTGATCTGTCTTCTATCCAGGACGAAATTAAATCCCGTCTGGATGAAATTGACCGCGTATCTGGTCAGACCCAGTTCAACGGCGTGAACGTGCTGGCAAAAAATGGCTCCATGAAAATCCAGGTTGGCGCAAATGATAACCAGACTATCACTATCGATCTGAAGCAGATTGATGCTAAAACTCTTGGCCTTGATGGTTTTAGCGTTAAAAATAACGATACAGTTACCACTAGTGCTCCAGTAACTGCTTTTGGTGCTACCACCACAAACAATATTAAACTTACTGGAATTACCCTTTCTACGGAAGCAGCCACTGATACTGGCGGAACTAACCCAGCTTCAATTGAGGGTGTTTATACTGATAATGGTAATGATTACTATGCGAAAATCACCGGTGGTGATAACGATGGGAAGTATTACGCAGTAACAGTTGCTAATGATGGTACAGTGACAATGGCGACTGGAGCAACGGCAAATGCAACTGTAACTGATGCAAATACTACTAAAGCTACAACTATCACTTCAGGCGGTACACCTGTTCAGATTGATAATACTGCAGGTTCCGCAACTGCCAACCTTGGTGCTGTTAGCTTAGTAAAACTGCAGGATTCCAAGGGTAATGATACCGATACATATGCGCTTAAAGATACAAATGGCAATCTTTACGCTGCGGATGTGAATGAAACTACTGGTGCTGTTTCTGTTAAAACTATTACCTATACTGACTCTTCCGGTGCCGCCAGTTCTCCAACCGCGGTCAAACTGGGCGGAGATGATGGCAAAACAGAAGTGGTCGATATTGATGGTAAAACATACGATTCTGCCGATTTAAATGGCGGTAATCTGCAAACAGGTTTGACTGCTGGTGGTGAGGCTCTGACTGCTGTTGCAAATGGTAAAACCACGGATCCGCTGAAAGCGCTGGACGATGCTATCGCATCTGTAGACAAATTCCGTTCTTCCCTCGGTGCGGTGCAAAACCGTCTGGATTCCGCGGTTACCAACCTGAACAACACCACTACCAACCTGTCTGAAGCGCAGTCCCGTATTCAGGACGCCGACTATGCGACCGAAGTGTCCAATATGTCGAAAGCGCAGATCATCCAGCAGGCCGGTAACTCCGTGTTGGCAAAAGCTAACCAGGTACCGCAGCAGGTTCTGTCTCTGCTGCAGGGTTAA", 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"UniProtKB/Swiss-Prot:P24216" - ], - [ - "gene_synonym", - "b1924" - ], - [ - "gene_synonym", - "GeneID:946428" - ], - [ - "gene_synonym", - "ECK1923" - ], - [ - "gene_synonym", - "EcoGene:EG10841" - ], - [ - "gene_synonym", - "flbC" - ], - [ - "gene_synonym", - "JW1909" - ], - [ - "gene_synonym", - "GI:16129871" - ], - [ - "gene_synonym", - "fliD" - ], - [ - "gene_synonym", - "NP_416434.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006407" - ] - ], - "dna_sequence": "ATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCCATCCTTGATAGCCTCACCGCCGCGCAAAAAGCGACGCTAACCCCCATTTCAAATCAGCAATCGTCGTTTACCGCTAAACTTAGCGCCTACGGTACGCTGAAAAGCGCGCTGACGACTTTCCAGACCGCCAATACTGCATTGTCTAAAGCCGATCTTTTTTCCGCCACCAGCACCACCAGCAGCACCACCGCGTTCAGTGCCACCACTGCGGGTAACGCCATCGCCGGGAAATACACCATCAGCGTCACCCATCTGGCGCAGGCGCAAACCCTGACCACGCGCACCACCAGAGACGATACGAAAACGGCGATCGCCACCAGCGACAGTAAACTCACCATTCAACAAGGCGGCGACAAAGATCCGATTACCATTGATATCAGCGCGGCTAACTCATCGTTAAGCGGGATCCGTGATGCCATCAACAACGCAAAAGCAGGCGTAAGCGCAAGCATCATTAACGTGGGTAACGGTGAATATCGTCTGTCAGTCACATCAAATGACACCGGCCTTGATAATGCGATGACACTCTCGGTCAGCGGTGATGATGCGCTACAAAGTTTTATGGGCTATGACGCCAGTGCCAGCAGCAACGGTATGGAGGTCTCGGTTGCCGCCCAGAATGCGCAGCTGACAGTCAACAACGTCGCCATCGAGAACAGCAGCAACACCATCAGCGACGCGCTGGAAAACATCACCCTGAACCTGAACGATGTCACCACGGGCAACCAGACGCTAACCATCACTCAGGACACCTCCAAAGCGCAAACGGCGATTAAAGACTGGGTGAATGCCTACAACTCGCTAATAGATACCTTCAGCAGCCTGACCAAATACACCGCCGTAGATGCGGGAGCTGATAGCCAGAGTTCTAGCAATGGTGCACTGCTCGGCGACTCCACGCTGCGGACGATTCAGACGCAGTTGAAATCGATGCTGAGTAATACCGTCAGTTCTTCCAGCTATAAAACGTTGGCGCAGATTGGTATCACGACCGATCCCAGCGATGGCAAACTGGAACTGGATGCCGACAAACTCACCGCTGCACTGAAAAAAGATGCCAGCGGCGTAGGTGCATTGATTGTTGGCGATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGACAACGGGCATTATTAAAGCCGCTACCGATGGCGTTAGTAAGACCCTGAATAAATTAACTAAAGACTACAACGCCGCCAGCGATCGCATTGATGCGCAGGTCGCTCGCTACAAAGAACAATTTACCCAACTGGACGTTTTAATGACCTCGTTAAACAGCACCAGCAGCTACTTAACGCAGCAGTTCGAAAACAACAGTAATTCCAAGTAA", 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"gene_synonym", - "NP_416435.1" - ], - [ - "gene_synonym", - "fliS" - ], - [ - "gene_synonym", - "ASAP:ABE-0006409" - ], - [ - "gene_synonym", - "GI:16129872" - ], - [ - "gene_synonym", - "EcoGene:EG11388" - ], - [ - "gene_synonym", - "JW1910" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P26608" - ] - ], - "dna_sequence": "ATGTACGCGGCAAAAGGCACCCAGGCCTATGCACAAATTGGCGTCGAAAGCGCCGTAATGAGCGCCAGCCAGCAGCAGCTGGTCACCATGCTATTTGATGGAGTGCTGAGCGCACTGGTTAGAGCGAGCCTGTTTATGCAGGACAACAATCAGCAAGGCAAAGGCGTCTCTTTGTCAAAAGCGATCAACATCATTGAGAACGGACTGCGGGTGAGTCTTGATGAAGAGAGCAAAGACGAACTAACCCAAAACTTGATTGCTCTTTATAGCTATATGGTCAGGCGCTTGCTGCAAGCCAATTTACGCAACGATGTCTCCGCAGTCGAAGAAGTGGAAGCATTAATGCGCAATATTGCCGATGCCTGGAAAGAGTCGTTACTCTCCCCTTCTTTGATTCAGGACCCAGTCTGA", - "dna_sequence_length": 411, - "functions": [ - "flagellar protein potentiates polymerization" - ], - "id": "CDS_1915", - "location": [ - [ - "NC_000913", - 2005303, - "+", - 411 - ] - ], - "md5": "172b62b0bad693cefdffab996d83dda0", - "parent_gene": "", - "protein_md5": "b779260995a5d02e533285168f594b9f", - "protein_translation": "MYAAKGTQAYAQIGVESAVMSASQQQLVTMLFDGVLSALVRASLFMQDNNQQGKGVSLSKAINIIENGLRVSLDEESKDELTQNLIALYSYMVRRLLQANLRNDVSAVEEVEALMRNIADAWKESLLSPSLIQDPV", - "protein_translation_length": 136, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1926" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABY2" - ], - [ - "gene_synonym", - "fliT" - ], - [ - "gene_synonym", - "ECK1925" - ], - [ - "gene_synonym", - "GeneID:946433" - ], - [ - "gene_synonym", - "GI:16129873" - ], - [ - "gene_synonym", - "EcoGene:EG11389" - ], - [ - "gene_synonym", - "JW1911" - ], - [ - "gene_synonym", - "ASAP:ABE-0006411" - ], - [ - "gene_synonym", - "NP_416436.1" - ] - ], - "dna_sequence": "ATGAACCATGCACCGCATTTATATTTCGCCTGGCAACAACTCGTCGAAAAAAGCCAGCTCATGTTACGCCTGGCAACGGAAGAACAATGGGACGAACTCATCGCCAGCGAAATGGCGTATGTGAATGCGGTGCAGGAGATTGCACATTTGACTGAAGAGGTTGACCCGTCCACCACGATGCAGGAGCAGCTCCGCCCGATGCTGCGCCTGATTCTCGACAACGAAAGCAAGGTAAAGCAGTTATTACAGATTCGGATGGATGAACTGGCGAAACTGGTCGGTCAGTCATCGGTGCAAAAATCGGTGTTAAGTGCCTATGGCGATCAGGGCGGCTTTGTGCTGGCTCCGCAGGATAACCTCTTTTGA", - "dna_sequence_length": 366, - "functions": [ - "putative flagellar synthesis and assembly chaperone" - ], - "id": "CDS_1916", - "location": [ - [ - "NC_000913", - 2005713, - "+", - 366 - ] - ], - "md5": "9f6a87ba0b9907d8532539d5765db95f", - "parent_gene": "", - "protein_md5": "57193e5948ba0def8bea68ffd8eaa3dd", - "protein_translation": "MNHAPHLYFAWQQLVEKSQLMLRLATEEQWDELIASEMAYVNAVQEIAHLTEEVDPSTTMQEQLRPMLRLILDNESKVKQLLQIRMDELAKLVGQSSVQKSVLSAYGDQGGFVLAPQDNLF", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1927" - ], - [ - "gene_synonym", - "GeneID:946434" - ], - [ - "gene_synonym", - "yedC" - ], - [ - "gene_synonym", - "ECK1926" - ], - [ - "gene_synonym", - "NP_416437.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P26612" - ], - [ - "gene_synonym", - "GI:16129874" - ], - [ - "gene_synonym", - "EcoGene:EG11387" - ], - [ - "gene_synonym", - "JW1912" - ], - [ - "gene_synonym", - "ASAP:ABE-0006414" - ], - [ - "gene_synonym", - "amyA" - ] - ], - "dna_sequence": "ATGCGTAATCCCACGCTGTTACAATGTTTTCACTGGTATTACCCGGAAGGCGGTAAGCTCTGGCCTGAACTGGCCGAGCGCGCCGACGGTTTTAATGATATTGGTATCAATATGGTCTGGTTGCCGCCCGCCTATAAAGGCGCATCGGGCGGGTATTCGGTCGGCTACGACTCCTATGATTTATTTGATTTAGGCGAGTTTGATCAGAAAGGCAGCATCCCTACTAAATATGGCGATAAAGCACAACTGCTGGCCGCCATTGATGCTCTGAAACGTAATGACATTGCGGTGCTGTTGGATGTGGTAGTCAACCACAAAATGGGCGCGGATGAAAAAGAAGCTATTCGCGTGCAGCGTGTAAATGCTGATGACCGTACGCAAATTGACGAAGAAATCATTGAGTGTGAAGGCTGGACGCGTTACACCTTCCCCGCCCGTGCCGGGCAATACTCGCAGTTTATCTGGGATTTCAAATGTTTTAGCGGTATCGACCATATCGAAAACCCTGACGAAGATGGCATTTTTAAAATTGTTAACGACTACACCGGCGAAGGCTGGAACGATCAGGTTGATGATGAATTAGGTAATTTCGATTATCTGATGGGCGAGAATATCGATTTTCGCAATCATGCCGTGACGGAAGAGATTAAATACTGGGCGCGCTGGGTGATGGAACAAACGCAATGCGACGGTTTTCGTCTTGATGCGGTCAAACATATTCCAGCCTGGTTTTATAAAGAGTGGATCGAACACGTACAGGAAGTTGCGCCAAAGCCGCTGTTTATTGTGGCGGAGTACTGGTCGCATGAAGTTGATAAGCTGCAAACGTATATTGATCAGGTGGAAGGCAAAACCATGCTGTTTGATGCGCCGCTGCAGATGAAATTCCATGAAGCATCGCGCATGGGGCGCGACTACGACATGACGCAGATTTTCACGGGTACATTAGTGGAAGCCGATCCTTTCCACGCCGTGACGCTCGTTGCCAATCACGACACCCAACCGTTGCAAGCCCTCGAAGCGCCGGTCGAACCGTGGTTTAAACCGCTGGCGTATGCCTTAATTTTGTTGCGGGAAAATGGCGTTCCTTCGGTATTCTATCCGGACCTCTACGGTGCGCATTACGAAGATGTCGGTGGTGACGGGCAAACCTATCCGATAGATATGCCAATAATCGAACAGCTTGATGAGTTAATTCTCGCCCGTCAGCGTTTCGCCCACGGTGTACAGACGTTATTTTTCGACCATCCGAACTGCATTGCCTTTAGCCGCAGTGGCACCGACGAATTTCCCGGCTGCGTGGTGGTCATGTCGAACGGGGATGATGGCGAAAAAACCATTCATCTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCAAGAGAGAGTAGTGACCGACGAAAACGGCGAAGCAACCTTCTTTTGCAACGGCGGCAGCGTCAGCGTGTGGGTTATCGAAGAGGTGATTTAA", 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- "gene_synonym", - "ASAP:ABE-0006416" - ], - [ - "gene_synonym", - "EcoGene:EG11659" - ], - [ - "gene_synonym", - "yedD" - ], - [ - "gene_synonym", - "ECK1927" - ], - [ - "gene_synonym", - "GI:16129875" - ], - [ - "gene_synonym", - "NP_416438.1" - ], - [ - "gene_synonym", - "JW1913" - ], - [ - "gene_synonym", - "b1928" - ] - ], - "dna_sequence": "ATGAAAAAACTCGCAATTGCAGGCGCGCTCTTGTTGCTGGCGGGCTGTGCCGAAGTCGAAAACTATAACAATGTCGTGAAAACCCCCGCGCCGGACTGGCTGGCGGGCTACTGGCAGACCAAAGGGCCGCAACGTGCGCTGGTCAGCCCGGAAGCGATAGGCAGCCTGATTGTCACTAAAGAGGGCGATACCCTGGATTGCCGTCAGTGGCAGCGGGTGATTGCCGTGCCGGGTAAGTTGACATTGATGTCTGATGATCTCACTAACGTTACCGTAAAACGTGAGCTGTACGAGGTTGAGCGTGACGGTAACACCATTGAGTACGATGGTATGACGATGGAGCGTGTGGATCGCCCGACAGCAGAGTGTGCCGCCGCGCTGGATAAAGCGCCGTTACCGACGCCACTGCCGTAA", - "dna_sequence_length": 414, - "functions": [ - "lipoprotein" - ], - "id": "CDS_1918", - "location": [ - [ - "NC_000913", - 2008090, - "-", - 414 - ] - ], - "md5": "3f449cc1c8b5b1a8e8fbf46f6d013cb4", - "parent_gene": "", - "protein_md5": "e99379590fb5f2cc1c89fea816ad8452", - "protein_translation": "MKKLAIAGALLLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQRALVSPEAIGSLIVTKEGDTLDCRQWQRVIAVPGKLTLMSDDLTNVTVKRELYEVERDGNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP", - "protein_translation_length": 137, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1928" - ], - [ - "gene_synonym", - "GeneID:945192" - ], - [ - "gene_synonym", - "ASAP:ABE-0006422" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31064" - ], - [ - "gene_synonym", - "yedE" - ], - [ - "gene_synonym", - "b1929" - ], - [ - "gene_synonym", - "GI:16129876" - ], - [ - "gene_synonym", - "NP_416439.1" - ], - [ - "gene_synonym", - "EcoGene:EG11660" - ], - [ - "gene_synonym", - "JW1914" - ] - ], - "dna_sequence": "ATGTCATGGCAGCAATTCAAACACGCCTGGTTGATTAAATTCTGGGCCCCCATCCCTGCGGTCATCGCGGCGGGTATTCTCTCTACTTACTATTTTGGCATTACTGGCACCTTTTGGGCTGTCACGGGTGAATTTACCCGTTGGGGCGGCCAGCTCCTGCAACTGTTCGGCGTCCATGCTGAAGAGTGGGGTTACTTTAAAATTATCCATCTGGAAGGATCGCCATTAACCCGCATCGACGGGATGATGATCCTCGGTATGTTTGGCGGCTGCTTTGCCGCAGCGCTGTGGGCCAACAATGTCAAACTGCGAATGCCGCGCAGCCGTATCCGCATTATGCAGGCCATCATTGGCGGCATTATCGCCGGTTTTGGCGCGCGTCTGGCAATGGGCTGTAACCTGGCGGCGTTCTTTACCGGTATTCCTCAGTTCTCGCTGCATGCCTGGTTCTTTGCCATCGCCACTGCCATTGGTTCATGGTTTGGCGCGCGCTTTACCCTGCTGCCCATCTTCCGTATTCCCGTGAAAATGCAGAAAGTTTCTGCCGCCTCACCGCTGACGCAAAAACCGGATCAGGCGCGGCGTCGTTTTCGTCTCGGGATGCTGGTCTTTTTCGGCATGCTGGGCTGGGCGCTGCTCACAGCGATGAACCAACCCAAACTGGGGCTGGCAATGCTGTTTGGCGTCGGCTTTGGTTTACTGATTGAACGTGCGCAAATCTGCTTTACTTCAGCGTTCCGCGATATGTGGATCACCGGACGTACCCATATGGCGAAAGCAATCATTATCGGTATGGCGGTGAGTGCCATCGGGATCTTCAGTTACGTACAGTTAGGCGTTGAACCCAAAATCATGTGGGCGGGACCAAACGCGGTAATTGGTGGTTTACTGTTTGGTTTTGGCATCGTGCTGGCTGGCGGCTGCGAAACCGGCTGGATGTACCGCGCGGTAGAAGGCCAGGTGCACTACTGGTGGGTCGGTCTGGGCAATGTGATCGGCTCAACGATTCTGGCGTATTACTGGGATGATTTCGCTCCGGCGCTGGCCACCGACTGGGACAAAATCAACCTGCTGAAAACCTTTGGTCCGATGGGTGGCCTGCTGGTGACATATTTGCTGTTGTTTGCTGCGCTGATGTTGATTATCGGCTGGGAAAAACGCTTCTTCCGCCGTGCGGCACCGCAGACTGCTAAGGAGATCGCATGA", 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- }, - { - "aliases": [ - [ - "gene_synonym", - "b1931" - ], - [ - "gene_synonym", - "yedK" - ], - [ - "gene_synonym", - "yedG" - ], - [ - "gene_synonym", - "ECK1930" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76318" - ], - [ - "gene_synonym", - "GI:49176171" - ], - [ - "gene_synonym", - "EcoGene:EG13278" - ], - [ - "gene_synonym", - "GeneID:946435" - ], - [ - "gene_synonym", - "ASAP:ABE-0006428" - ], - [ - "gene_synonym", - "JW1916" - ], - [ - "gene_synonym", - "YP_025310.1" - ] - ], - "dna_sequence": 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"ATGTTCACGATTAAAACAGATGATCTCACCCATCCAGCAGTGCAAGCATTAGTGGCTTACCATATTTCCGGCATGCTGCAGCAGTCTCCCCCCGAAAGCAGTCATGCTTTAGATGTGCAAAAATTACGTAACCCGACAGTGACATTCTGGTCAGTATGGGAAGGCGAACAACTCGCAGGAATTGGTGCGCTGAAGTTGCTGGATGATAAACACGGCGAGCTGAAATCAATGCGTACCGCGCCAAATTATTTACGTCGTGGTGTCGCCAGTCTGATTTTACGCCACATTTTGCAGGTCGCCCAGGACAGATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAATAATGAATTGCCATGA", - "dna_sequence_length": 480, - "functions": [ - "GNAT family putative N-acetyltransferase" - ], - "id": "CDS_1922", - "location": [ - [ - "NC_000913", - 2010600, - "+", - 480 - ] - ], - "md5": "9be0d03fd9e243f62b299f1266e49b68", - "parent_gene": "", - "protein_md5": "58f0906a588b171e3dfd7c3e67d0372e", - "protein_translation": "MFTIKTDDLTHPAVQALVAYHISGMLQQSPPESSHALDVQKLRNPTVTFWSVWEGEQLAGIGALKLLDDKHGELKSMRTAPNYLRRGVASLILRHILQVAQDRCLHRLSLETGTQAGFTACHQLYLKHGFADCEPFADYRLDPHSRFLSLTLCENNELP", - 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"UniProtKB/Swiss-Prot:P76323" - ], - [ - "gene_synonym", - "GeneID:946445" - ] - ], - "dna_sequence": "GTGGTCGTAACAACATCCGACGTGGTGATGTGTCAAATGAGACGCTCTGATGTTCAGGGGGGTTATCGCGTATACGGATCGTGGATGGCAGAAAACGTTCAGGATCAGGTATCCATTTTAAACCAGAAATTGAGTGAGTTTGCCCCATCCATGCCCCACGCG", - "dna_sequence_length": 162, - "id": "CDS_1924", - "location": [ - [ - "NC_000913", - 2012502, - "+", - 162 - ] - ], - "md5": "da3635745ba54eaab8369dc6f4a1608e", - "parent_gene": "", - "protein_md5": "90093116d3b8370a27ae356f76690299", - "protein_translation": "VVVTTSDVVMCQMRRSDVQGGYRVYGSWMAENVQDQVSILNQKLSEFAPSMPHA", - "protein_translation_length": 54, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1921" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8T5" - ], - [ - "gene_synonym", - "b1937" - ], - [ - "gene_synonym", - "ASAP:ABE-0006447" - ], - [ - "gene_synonym", - "GeneID:946446" - ], - [ - "gene_synonym", - "EcoGene:EG11346" - ], - [ - "gene_synonym", - "ECK1935" - ], - [ - "gene_synonym", - "NP_416447.1" - ], - [ - "gene_synonym", - "fliE" - ], - [ - "gene_synonym", - "flaN" - ], - [ - "gene_synonym", - "flaAI" - ], - [ - "gene_synonym", - "GI:16129884" - ] - ], - "dna_sequence": "ATGTCAGCGATACAGGGGATTGAAGGGGTTATCAGCCAGTTACAGGCTACGGCGATGAGTGCGCGTGCGCAGGAATCACTGCCGCAACCGACCATTAGTTTTGCCGGGCAGCTGCACGCCGCGCTCGATCGCATTAGTGATACACAAACAGCTGCCCGCACGCAGGCAGAAAAATTCACTCTCGGTGAACCCGGCGTGGCGTTAAACGATGTGATGACCGATATGCAAAAAGCCTCAGTTTCTATGCAAATGGGGATTCAGGTGCGTAATAAGCTGGTGGCGGCGTATCAGGAAGTGATGAGCATGCAGGTGTAG", - "dna_sequence_length": 315, - "functions": [ - "flagellar basal-body component" - ], - "id": "CDS_1925", - "location": [ - [ - "NC_000913", - 2013014, - "-", - 315 - ] - ], - "md5": "5713a34c2106e0a863f8792e6e0c9b30", - "parent_gene": "", - "protein_md5": "04f7883eb4067e4777f3da3174173415", - "protein_translation": "MSAIQGIEGVISQLQATAMSARAQESLPQPTISFAGQLHAALDRISDTQTAARTQAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSMQV", - "protein_translation_length": 104, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "flaAII.1" - ], - [ - "gene_synonym", - "GeneID:946448" - ], - [ - "gene_synonym", - "EcoGene:EG11347" - ], - [ - "gene_synonym", - "JW1922" - ], - [ - "gene_synonym", - "b1938" - ], - [ - "gene_synonym", - "ECK1936" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25798" - ], - [ - "gene_synonym", - "flaBI" - ], - [ - "gene_synonym", - "ASAP:ABE-0006454" - ], - [ - "gene_synonym", - "fliF" - ], - [ - "gene_synonym", - "NP_416448.1" - ], - [ - "gene_synonym", - "GI:16129885" - ] - ], - "dna_sequence": "ATGAATGCGACTGCAGCCCAGACAAAATCTCTTGAGTGGCTTAATCGCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAGCCCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTACCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCCTTCTGCATCGGTGACGGTAAATCTGTTACCCGGCCGCGCACTCGATGAAGGGCAAATTAGCGCCATTGTGCATCTGGTTTCCAGCGCCGTTGCTGGTCTGCCGCCGGGAAACGTCACGCTGGTGGATCAGGGCGGACATCTGTTAACCCAGTCCAATACCAGCGGGCGCGATCTTAATGACGCTCAGTTGAAATATGCCAGCGATGTCGAAGGCCGTATTCAGCGGCGTATTGAAGCGATCCTGTCGCCTATTGTTGGTAACGGTAATATTCACGCCCAGGTTACGGCGCAGCTGGACTTCGCCAGTAAAGAACAAACGGAAGAACAGTATCGCCCTAACGGTGATGAATCTCATGCGGCGCTTCGTTCACGCCAGCTTAATGAGAGCGAGCAAAGCGGTTCCGGTTATCCGGGCGGCGTACCGGGGGCGTTGTCGAATCAACCGGCACCTGCGAATAACGCGCCAATCAGCACGCCTCCGGCAAATCAAAATAACCGCCAGCAGCAGGCGAGCACCACCAGCAATAGTGGGCCGCGTAGCACACAGCGGAATGAAACCAGTAACTACGAAGTCGATCGCACCATTCGTCATACCAAAATGAACGTGGGCGATGTGCAACGTCTGTCAGTCGCGGTCGTGGTGAATTACAAAACCTTGCCAGATGGCAAACCGTTGCCTCTCAGCAACGAACAGATGAAGCAAATTGAAGATCTGACCCGCGAGGCGATGGGCTTTTCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAGCGGCGGAGAACTGCCATTCTGGCAACAGCAAGCGTTTATCGATCAGTTACTTGCTGCCGGTCGCTGGTTGCTGGTACTGCTGGTGGCGTGGCTGCTGTGGCGGAAAGCGGTACGTCCGCAGCTAACACGTCGCGCTGAGGCGATGAAAGCTGTACAGCAACAGGCGCAGGCCCGCGAGGAAGTGGAAGATGCGGTGGAAGTCCGCCTGAGCAAAGACGAACAACTACAACAACGGCGCGCTAACCAACGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAA", 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"JW1923" - ], - [ - "gene_synonym", - "flaAII.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABZ1" - ], - [ - "gene_synonym", - "GeneID:946451" - ], - [ - "gene_synonym", - "b1939" - ], - [ - "gene_synonym", - "EcoGene:EG11654" - ], - [ - "gene_synonym", - "ECK1937" - ], - [ - "gene_synonym", - "ASAP:ABE-0006456" - ], - [ - "gene_synonym", - "fliG" - ], - [ - "gene_synonym", - "NP_416449.1" - ], - [ - "gene_synonym", - "GI:16129886" - ], - [ - "gene_synonym", - "flaBII" - ] - ], - "dna_sequence": 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"GeneID:946456" - ], - [ - "gene_synonym", - "flaAII.3" - ], - [ - "gene_synonym", - "fliH" - ], - [ - "gene_synonym", - "ASAP:ABE-0006458" - ], - [ - "gene_synonym", - "GI:90111357" - ], - [ - "gene_synonym", - "NP_416450.2" - ], - [ - "gene_synonym", - "b1940" - ] - ], - "dna_sequence": "ATGTCTGATAATCTGCCGTGGAAAACCTGGACGCCGGACGATCTCGCGCCACCACAGGCAGAGTTTGTGCCCATAGTCGAGCCGGAAGAAACCATCATTGAAGAGGCTGAACCCAGCCTTGAGCAGCAACTGGCGCAACTGCAAATGCAGGCCCATGAGCAAGGTTATCAGGCGGGTATTGCCGAAGGTCGCCAGCAAGGTCATAAGCAGGGCTATCAGGAAGGACTGGCCCAGGGGCTGGAGCAAGGTCTGGCAGAGGCGAAGTCTCAACAAGCGCCAATTCATGCCCGGATGCAGCAACTGGTCAGCGAATTTCAAACTACCCTTGATGCACTTGATAGTGTGATAGCGTCGCGCCTGATGCAGATGGCGCTGGAGGCGGCACGTCAGGTCATCGGTCAGACGCCAACGGTGGATAACTCGGCACTGATCAAACAGATCCAACAGTTGTTGCAGCAAGAACCGTTATTCAGCGGTAAACCACAGCTGCGCGTGCACCCGGATGATCTGCAACGTGTGGATGATATGCTCGGCGCTACCTTAAGTTTGCATGGCTGGCGCTTGCGGGGCGATCCCACCCTCCATCCTGGCGGCTGTAAAGTCTCCGCCGATGAAGGCGATCTCGACGCCAGTGTCGCCACTCGCTGGCAAGAACTCTGCCGTCTGGCAGCACCAGGAGTGGTGTAA", - 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"gene_synonym", - "flaC" - ], - [ - "gene_synonym", - "fliI" - ], - [ - "gene_synonym", - "EcoGene:EG20266" - ] - ], - "dna_sequence": "ATGACCACGCGCCTGACTCGCTGGCTAACCACGCTGGATAACTTTGAAGCCAAAATGGCGCAGTTGCCTGCGGTACGTCGCTACGGGCGATTAACCCGCGCTACCGGGCTGGTGCTGGAAGCCACCGGATTACAATTGCCGCTCGGCGCAACCTGTGTCATTGAGCGCCAGAACGGCAGCGAAACGCACGAAGTAGAAAGCGAAGTCGTTGGCTTTAACGGTCAACGGCTGTTTTTAATGCCGCTGGAGGAAGTCGAAGGTGTCCTGCCCGGCGCGCGTGTTTATGCCAAAAACATTTCGGCAGAAGGGCTGCAAAGCGGCAAGCAGTTGCCGCTCGGTCCGGCGTTATTAGGTCGCGTTCTGGACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGTGGGTTTGATTGGTGAACGTGGGCGCGAAGTAAAAGATTTTATTGAGAACATCCTCGGTGCCGAAGGGCGTGCACGCTCAGTGGTGATTGCCGCTCCGGCGGATGTTTCTCCGCTCCTGCGAATGCAGGGTGCCGCCTATGCCACGCGCATTGCCGAAGATTTTCGCGATCGTGGTCAGCATGTGTTGCTGATTATGGACTCCCTCACCCGCTACGCGATGGCCCAGCGTGAAATTGCGCTGGCGATTGGCGAACCCCCCGCCACCAAAGGTTATCCACCGTCGGTGTTTGCCAAATTACCGGCACTGGTCGAGCGTGCCGGAAATGGCATTAGCGGCGGCGGCTCGATTACCGCGTTTTATACCGTGCTCACTGAAGGCGATGACCAGCAGGATCCGATTGCCGACTCCGCGCGGGCGATCCTCGACGGTCACATTGTGCTGTCTCGCCGACTGGCGGAAGCCGGGCACTATCCGGCTATCGATATTGAAGCGTCGATCAGCCGCGCAATGACGGCGTTGATCAGTGAGCAACATTACGCGCGAGTGCGCACCTTCAAACAGCTGTTGTCGAGTTTTCAGCGTAACCGCGATCTGGTTAGCGTCGGCGCGTATGCCAAAGGCAGCGATCCGATGCTCGATAAAGCCATCGCCCTGTGGCCGCAGCTGGAGGGCTATTTGCAACAAGGCATTTTTGAACGCGCGGACTGGGAAGCGTCTCTCCAGGGGCTGGAGCGTATTTTCCCGACAGTGTCATAA", 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"gene_synonym", - "GeneID:946454" - ], - [ - "gene_synonym", - "ECK1940" - ], - [ - "gene_synonym", - "NP_416452.1" - ], - [ - "gene_synonym", - "GI:16129889" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52613" - ], - [ - "gene_synonym", - "b1942" - ], - [ - "gene_synonym", - "EcoGene:EG20267" - ], - [ - "gene_synonym", - "flaO" - ] - ], - "dna_sequence": "ATGGCAGAACATGGTGCGCTGGCGACCCTGAAAGATCTGGCAGAAAAAGAGGTAGAGGATGCCGCGCGCCTGCTGGGTGAAATGCGTCGCGGATGTCAGCAGGCGGAAGAACAGCTCAAAATGCTGATTGATTATCAGAATGAATATCGCAATAACCTCAACAGCGATATGAGTGCCGGGATAACCAGCAACCGCTGGATCAACTATCAGCAGTTTATCCAGACGCTGGAAAAAGCCATTACTCAGCATCGCCAGCAACTTAATCAGTGGACGCAGAAAGTTGACATTGCCCTGAACAGTTGGCGAGAAAAAAAACAACGTTTGCAGGCCTGGCAGACACTGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGCGCCGCCATGAGGAAACCTGAATGA", - "dna_sequence_length": 444, - "functions": [ - "flagellar protein" - ], - "id": "CDS_1930", - "location": [ - [ - "NC_000913", - 2017946, - "+", - 444 - ] - ], - "md5": "8710beee076942e118859e008cf46103", - "parent_gene": "", - "protein_md5": "cb706f7a6ccb260924eae9f502dba8af", - "protein_translation": "MAEHGALATLKDLAEKEVEDAARLLGEMRRGCQQAEEQLKMLIDYQNEYRNNLNSDMSAGITSNRWINYQQFIQTLEKAITQHRQQLNQWTQKVDIALNSWREKKQRLQAWQTLQERQSTAALLAENRLDQKKMDEFAQRAAMRKPE", - "protein_translation_length": 147, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416453.1" - ], - [ - "gene_synonym", - "GeneID:946449" - ], - [ - "gene_synonym", - "JW1927" - ], - [ - "gene_synonym", - "fliK" - ], - [ - "gene_synonym", - "ASAP:ABE-0006464" - ], - [ - "gene_synonym", - "ECK1941" - ], - [ - "gene_synonym", - "flaE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52614" - ], - [ - "gene_synonym", - "b1943" - ], - [ - "gene_synonym", - "EcoGene:EG20268" - ], - [ - "gene_synonym", - "GI:16129890" - ] - ], - "dna_sequence": "ATGATTCGCTTAGCGCCCTTGATTACCGCCGACGTTGACACCACCACATTGCCTGGCGGCAAAGCCAGCGATGCTGCACAAGATTTTCTCGCGTTGTTGAGCGAAGCATTAGCAGGCGAGACAACTACCGACAAAGCGGCCCCCCAGTTGCTGGTGGCAACAGATAAGCCCACGACAAAAGGCGAGCCGCTGATCAGCGATATTGTTTCCGACGCGCAACAAGCTAATTTACTGATCCCTGTGGATGAAACACCGCCTGTCATCAACGACGAACAATCCACATCAACACCGTTAACCACCGCTCAGACGATGGCGTTGGCTGCGGTGGCTGACAAAAATACGACAAAAGACGAAAAAGCGGATGATCTGAATGAAGACGTCACCGCAAGCCTGAGCGCCCTTTTTGCGATGTTGCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCAACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCGGCACACCAGCTCAGCCATTAACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGCTAATCACTCCACACCAGACACAGCCACTGCCCACCGTCGCCGCACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCACCGCATCAGCATGTACGCGCCGCCCTGGAAGCAGCGCTGCCGGTACTGCGCACGCAGCTGGCCGAAAGTGGCATTCAGTTAGGGCAAAGCAACATCAGTGGCGAAAGCTTTAGTGGTCAGCAGCAGGCCGCTTCCCAGCAACAGCAAAGCCAACGCACAGCAAACCATGAACCTCTGGCGGGGGAAGACGACGATACGCTTCCGGTTCCCGTCTCTTTACAAGGGCGTGTAACAGGCAACAGCGGCGTTGATATTTTCGCCTAA", 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- [ - "gene_synonym", - "flaQI" - ], - [ - "gene_synonym", - "ASAP:ABE-0006467" - ], - [ - "gene_synonym", - "fliL" - ], - [ - "gene_synonym", - "b1944" - ], - [ - "gene_synonym", - "GeneID:946443" - ], - [ - "gene_synonym", - "NP_416454.1" - ], - [ - "gene_synonym", - "EcoGene:EG10322" - ], - [ - "gene_synonym", - "flaAI" - ] - ], - "dna_sequence": "ATGACTGATTACGCGATAAGCAAGAAAAGCAAGCGATCGCTTTGGATCCCGATTCTGGTATTCATTACCCTCGCGGCCTGTGCCAGCGCAGGTTACAGCTACTGGCATTCGCATCAGGTTGCCGCTGACGACAAAGCGCAGCAACGCGTCGTGCCCTCACCGGTCTTCTACGCGCTGGATACCTTCACGGTCAATTTGGGCGATGCGGATCGCGTACTTTATATCGGCATAACCCTGCGCCTGAAAGATGAAGCTACCCGCTCGCGGCTGAGTGAGTATTTGCCGGAAGTCCGTAGTCGCTTGCTGTTACTGTTTTCGCGTCAGGATGCTGCCGTACTGGCGACAGAAGAAGGCAAGAAAAACCTGATTGCCGAGATTAAAACCACACTTTCCACCCCGCTTGTTGCCGGGCAACCGAAACAGGATGTCACCGACGTGCTGTATACCGCTTTTATTCTGCGATAA", - "dna_sequence_length": 465, - "functions": [ - "flagellar biosynthesis protein" - ], - "id": "CDS_1932", - "location": [ - [ - "NC_000913", - 2019618, - "+", - 465 - ] - ], - "md5": "535cb60a44310fa5ee0d785872df2ed2", - "parent_gene": "", - "protein_md5": "06fc43f4d8fe0d35237de79ebe9ef69b", - "protein_translation": "MTDYAISKKSKRSLWIPILVFITLAACASAGYSYWHSHQVAADDKAQQRVVPSPVFYALDTFTVNLGDADRVLYIGITLRLKDEATRSRLSEYLPEVRSRLLLLFSRQDAAVLATEEGKKNLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFILR", - "protein_translation_length": 154, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b1945" - ], - [ - "gene_synonym", - "cheC2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06974" - ], - [ - "gene_synonym", - "flaQII" - ], - [ - "gene_synonym", - "GeneID:946442" - ], - [ - "gene_synonym", - "ASAP:ABE-0006469" - ], - [ - "gene_synonym", - "JW1929" - ], - [ - "gene_synonym", - "GI:16129892" - ], - [ - "gene_synonym", - "ECK1943" - ], - [ - "gene_synonym", - "EcoGene:EG10323" - ], - [ - "gene_synonym", - "fliM" - ], - [ - "gene_synonym", - "flaA" - ], - [ - "gene_synonym", - "flaAII" - ], - [ - "gene_synonym", - "NP_416455.1" - ] - ], - "dna_sequence": "ATGGGCGATAGTATTCTTTCTCAAGCTGAAATTGATGCGCTGTTGAATGGTGACAGCGAAGTCAAAGACGAACCGACAGCCAGTGTTAGCGGCGAAAGTGACATTCGTCCGTACGATCCGAATACCCAACGACGGGTTGTGCGCGAACGTTTGCAGGCGCTGGAAATCATTAATGAGCGCTTTGCCCGCCATTTTCGTATGGGGCTGTTCAACCTGCTGCGTCGTAGCCCGGATATAACCGTCGGGGCCATCCGCATTCAGCCGTACCATGAATTTGCCCGCAACCTGCCGGTGCCGACCAACCTGAACCTTATCCATCTGAAACCGCTGCGCGGCACTGGGCTGGTGGTGTTCTCACCGAGTCTGGTGTTTATCGCCGTGGATAACCTGTTTGGCGGCGATGGACGCTTCCCGACCAAAGTGGAAGGTCGCGAGTTTACCCATACCGAACAGCGCGTCATCAACCGCATGTTGAAACTGGCGCTTGAAGGCTATAGCGACGCCTGGAAGGCGATTAATCCGCTGGAAGTTGAGTACGTGCGTTCGGAAATGCAGGTGAAATTTACCAATATCACCACCTCGCCGAACGACATTGTGGTTAACACGCCGTTCCATGTGGAGATTGGCAACCTGACCGGCGAATTTAATATCTGCCTGCCATTCAGCATGATCGAGCCGCTACGGGAATTGTTGGTTAACCCGCCGCTGGAAAACTCGCGTAATGAAGATCAGAACTGGCGCGATAACCTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTAACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGA", 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"UniProtKB/Swiss-Prot:P15070" - ], - [ - "gene_synonym", - "GeneID:946423" - ], - [ - "gene_synonym", - "b1946" - ], - [ - "gene_synonym", - "motD" - ], - [ - "gene_synonym", - "fliN" - ], - [ - "gene_synonym", - "ASAP:ABE-0006471" - ] - ], - "dna_sequence": "ATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGATTATGGATATTCCGGTCAAGCTGACCGTCGAGCTGGGCCGTACGCGGATGACCATCAAAGAGCTGTTGCGTCTGACGCAAGGGTCCGTCGTGGCGCTGGACGGTCTGGCGGGCGAACCACTGGATATTCTGATCAACGGTTATTTAATCGCCCAGGGCGAAGTGGTGGTCGTTGCCGATAAATATGGCGTGCGGATCACCGATATCATTACTCCGTCTGAGCGAATGCGCCGCCTGAGCCGTTAG", - "dna_sequence_length": 414, - "functions": [ - "flagellar motor switching and energizing component" - ], - "id": "CDS_1934", - "location": [ - [ - "NC_000913", - 2021088, - "+", - 414 - ] - ], - "md5": "f4211cbc10014b19c5e074295bb226f2", - "parent_gene": "", - "protein_md5": "c68bb0a3d146e7aff35a0b92b41740b4", - "protein_translation": "MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAAETVFQQFGGGDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILINGYLIAQGEVVVVADKYGVRITDIITPSERMRRLSR", - "protein_translation_length": 137, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946458" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P22586" - ], - [ - "gene_synonym", - "ECK1945" - ], - [ - "gene_synonym", - "flbD" - ], - [ - "gene_synonym", - "NP_416457.4" - ], - [ - "gene_synonym", - "b1947" - ], - [ - "gene_synonym", - "ASAP:ABE-0006473" - ], - [ - "gene_synonym", - "fliO" - ], - [ - "gene_synonym", - "GI:90111358" - ], - [ - "gene_synonym", - "JW5316" - ], - [ - "gene_synonym", - "EcoGene:EG11224" - ] - ], - "dna_sequence": "ATGAATAACCACGCTACTGTGCAATCTTCCGCGCCGGTTTCTGCTGCGCCACTGCTGCAGGTGAGCGGCGCACTCATCGCCATTATTGCCCTGATCCTCGCTGCTGCCTGGCTGGTAAAACGGTTGGGATTTGCCCCTAAACGCACTGGCGTTAACGGTCTGAAAATTAGCGCCAGTGCTTCACTGGGCGCGCGTGAAAGGGTTGTGGTGGTCGATGTGGAAGATGCACGGCTGGTGCTCGGCGTTACCGCAGGTCAAATCAATCTGCTGCATAAACTTCCCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTTTCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGA", - "dna_sequence_length": 366, - "functions": [ - "flagellar biosynthesis protein" - ], - "id": "CDS_1935", - "location": [ - [ - "NC_000913", - 2021504, - "+", - 366 - ] - ], - "md5": "cfc611133ee71d31c31d3e3bf006cf78", - "parent_gene": "", - "protein_md5": "5d25848d824728a0365a39fb675cbc50", - "protein_translation": "MNNHATVQSSAPVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASASLGARERVVVVDVEDARLVLGVTAGQINLLHKLPPSAPTEEIPQTDFQSVMKNLLKRSGRS", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129895" - ], - [ - "gene_synonym", - "EcoGene:EG11975" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC05" - ], - [ - "gene_synonym", - "NP_416458.1" - ], - [ - "gene_synonym", - "JW1932" - ], - [ - "gene_synonym", - "flaR" - ], - [ - "gene_synonym", - "ECK1946" - ], - [ - "gene_synonym", - "fliP" - ], - [ - "gene_synonym", - "ASAP:ABE-0006475" - ], - [ - "gene_synonym", - "GeneID:946462" - ], - [ - "gene_synonym", - "b1948" - ] - ], - "dna_sequence": "ATGCGTCGTTTATTGTCTGTCGCACCTGTCCTTCTCTGGCTGATTACGCCCCTCGCCTTCGCGCAACTGCCGGGTATCACCAGCCAGCCGCTGCCTGGCGGTGGACAAAGCTGGTCGCTCCCGGTGCAGACGCTGGTGTTCATCACCTCGTTGACGTTTATTCCGGCAATTTTACTGATGATGACCAGTTTCACCCGCATCATCATTGTTTTTGGTTTATTGCGTAACGCGCTGGGAACACCCTCCGCGCCACCTAACCAGGTATTGCTGGGGCTGGCACTGTTTTTGACCTTTTTTATTATGTCACCGGTGATCGACAAAATTTATGTAGATGCGTACCAGCCATTCAGCGAAGAGAAAATATCAATGCAGGAGGCGCTGGAAAAAGGGGCGCAGCCGCTGCGTGAGTTTATGCTGCGTCAGACCCGTGAGGCAGATTTAGGGTTGTTTGCCAGACTGGCGAATACCGGCCCGTTGCAGGGACCTGAAGCCGTGCCGATGCGCATTTTGCTCCCGGCCTACGTGACCAGCGAGTTGAAAACCGCATTTCAGATAGGCTTCACGATTTTCATCCCTTTTTTGATTATCGACCTGGTGATAGCCAGCGTGTTGATGGCATTGGGGATGATGATGGTTCCCCCAGCCACCATTGCTCTGCCCTTTAAACTGATGCTGTTTGTACTGGTGGATGGCTGGCAATTGCTGGTCGGTTCGCTGGCGCAGAGCTTTTACAGCTAG", - "dna_sequence_length": 738, - "functions": [ - "flagellar biosynthesis protein" - ], - "id": "CDS_1936", - "location": [ - [ - "NC_000913", - 2021869, - "+", - 738 - ] - ], - "md5": "9e2958510c60a6d73731c5b0611c4c49", - "parent_gene": "", - "protein_md5": "8ddbf52dcdb3fae25c201bda719dd28c", - "protein_translation": "MRRLLSVAPVLLWLITPLAFAQLPGITSQPLPGGGQSWSLPVQTLVFITSLTFIPAILLMMTSFTRIIIVFGLLRNALGTPSAPPNQVLLGLALFLTFFIMSPVIDKIYVDAYQPFSEEKISMQEALEKGAQPLREFMLRQTREADLGLFARLANTGPLQGPEAVPMRILLPAYVTSELKTAFQIGFTIFIPFLIIDLVIASVLMALGMMMVPPATIALPFKLMLFVLVDGWQLLVGSLAQSFYS", - "protein_translation_length": 245, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11976" - ], - [ - "gene_synonym", - "GI:16129896" - ], - [ - "gene_synonym", - "flaQ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC07" - ], - [ - "gene_synonym", - "ASAP:ABE-0006477" - ], - [ - "gene_synonym", - "JW1933" - ], - [ - "gene_synonym", - "ECK1947" - ], - [ - "gene_synonym", - "fliQ" - ], - [ - "gene_synonym", - "GeneID:946463" - ], - [ - "gene_synonym", - "NP_416459.1" - ], - [ - "gene_synonym", - "b1949" - ] - ], - "dna_sequence": "ATGACACCTGAATCGGTCATGATGATGGGGACTGAAGCGATGAAAGTCGCGCTGGCACTGGCTGCCCCGCTATTGTTGGTAGCGTTGGTCACGGGCCTTATCATCAGTATTTTGCAGGCCGCCACGCAGATTAACGAAATGACGCTGTCGTTTATTCCGAAAATCATCGCCGTATTTATCGCCATTATTATTGCCGGACCGTGGATGCTCAATCTGTTGCTGGATTACGTCCGCACCTTGTTCACTAACCTGCCGTATATCATCGGGTAG", - "dna_sequence_length": 270, - "functions": [ - "flagellar biosynthesis protein" - ], - "id": "CDS_1937", - "location": [ - [ - "NC_000913", - 2022616, - "+", - 270 - ] - ], - "md5": "9b99827ac229782964474e532a9feea7", - "parent_gene": "", - "protein_md5": "ad19a7639463b8497f82a7cafc7e6d6c", - "protein_translation": "MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQINEMTLSFIPKIIAVFIAIIIAGPWMLNLLLDYVRTLFTNLPYIIG", - "protein_translation_length": 89, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW1934" - ], - [ - "gene_synonym", - "EcoGene:EG11977" - ], - [ - "gene_synonym", - "GI:16129897" - ], - [ - "gene_synonym", - "GeneID:946464" - ], - [ - "gene_synonym", - "flaP" - ], - [ - "gene_synonym", - "ECK1948" - ], - [ - "gene_synonym", - "NP_416460.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33135" - ], - [ - "gene_synonym", - "ASAP:ABE-0006479" - ], - [ - "gene_synonym", - "fliR" - ], - [ - "gene_synonym", - "b1950" - ] - ], - "dna_sequence": "ATGTTGCAGGTGACAAGCGAACAATGGCTATCCTGGTTAAACCTGTACTTCTGGCCGTTACTGCGCGTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGTAAAACTGGGTCTGGCAATGATGATCACGTTCGCCATTGCCCCATCATTACCTGCCAACGATGTTCCTGTTTTTTCGTTCTTTGCTCTGTGGCTGGCCGTGCAGCAGATCCTGATCGGCATTGCGCTTGGTTTTACCATGCAATTTGCCTTTGCCGCTGTGCGAACCGCTGGCGAAATTATCGGTCTGCAAATGGGGCTGTCATTTGCGACGTTTGTCGATCCGGCCAGCCATCTTAATATGCCCGTTTTAGCGCGTATCATGGATATGCTGGCGTTACTGCTGTTCCTGACATTTAACGGTCATTTATGGTTGATTTCACTGCTGGTCGATACCTTTCACACCCTGCCGATTGGTGGCGAACCGTTGAACAGCAATGCGTTTCTGGCACTCACCAAAGCAGGGAGTTTGATTTTCCTTAACGGGCTGATGCTGGCGTTACCGCTCATTACTCTGCTGCTGACACTGAATCTGGCATTAGGTTTACTTAATCGTATGGCCCCGCAATTATCCATTTTTGTTATTGGATTTCCATTAACTCTGACTGTCGGCATCTCTTTAATGGCGGCATTAATGCCGTTAATTGCACCTTTTTGCGAACATTTATTCAGTGAAATTTTTAATTTGCTGGCTGATATTATTAGTGAATTGCCATTAATATAA", - "dna_sequence_length": 786, - "functions": [ - "flagellar export pore protein" - ], - "id": "CDS_1938", - "location": [ - [ - "NC_000913", - 2022893, - "+", - 786 - ] - ], - "md5": "3116c31842e969c1b87c0f55a56f38af", - "parent_gene": "", - "protein_md5": "cdf73c6dcf78f0d6bf9c57115cdaf812", - "protein_translation": "MLQVTSEQWLSWLNLYFWPLLRVLALISTAPILSERSVPKRVKLGLAMMITFAIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEIIGLQMGLSFATFVDPASHLNMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIGGEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGFPLTLTVGISLMAALMPLIAPFCEHLFSEIFNLLADIISELPLI", - "protein_translation_length": 261, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006482" - ], - [ - "gene_synonym", - "JW1935" - ], - [ - "gene_synonym", - "rcsA" - ], - [ - "gene_synonym", - "ECK1949" - ], - [ - "gene_synonym", - "GI:16129898" - ], - [ - "gene_synonym", - "GeneID:946467" - ], - [ - "gene_synonym", - "NP_416461.1" - ], - [ - "gene_synonym", - "b1951" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69405" - ], - [ - "gene_synonym", - "EcoGene:EG10820" - ], - [ - "gene_synonym", - "cpsR" - ] - ], - "dna_sequence": "ATGTCAACGATTATTATGGATTTATGTAGTTACACCCGACTAGGTTTAACCGGGTATCTGTTGAGTAGAGGGGTTAAAAAAAGAGAAATCAACGACATTGAAACCGTTGATGACCTTGCCATAGCTTGTGATTCACAGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTAATCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTATTGATCAGTTCTAAATCGATTAAACCGGAATCTCTCGACGATATCCTTGGCGATATTCTGAAAAAAGAGACAACGATAACCTCGTTTTTAAATATGCCGACGTTATCATTGAGCCGAACCGAATCGAGTATGTTGCGAATGTGGATGGCAGGTCAGGGAACCATTCAAATCTCTGACCAAATGAATATCAAAGCCAAGACCGTTTCATCGCATAAAGGTAATATTAAACGTAAGATCAAAACGCATAATAAACAGGTTATCTACCATGTCGTCCGACTGACGGATAATGTGACTAATGGTATTTTTGTCAACATGCGCTAA", - "dna_sequence_length": 624, - "functions": [ - "transcriptional regulator of colanic acid capsular biosynthesis" - ], - "id": "CDS_1939", - "location": [ - [ - "NC_000913", - 2023968, - "+", - 624 - ] - ], - "md5": "20e05c423727440ea029d1735d63de3b", - "parent_gene": "", - "protein_md5": "8ecb76ea0b2a41f48e0279621449b66a", - "protein_translation": "MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGIFVNMR", - "protein_translation_length": 207, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1950" - ], - [ - "gene_synonym", - "JW1936" - ], - [ - "gene_synonym", - "ASAP:ABE-0006484" - ], - [ - "gene_synonym", - "GeneID:946468" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEG8" - ], - [ - "gene_synonym", - "dsrB" - ], - [ - "gene_synonym", - "GI:16129899" - ], - [ - "gene_synonym", - "b1952" - ], - [ - "gene_synonym", - "EcoGene:EG12636" - ], - [ - "gene_synonym", - "NP_416462.1" - ] - ], - "dna_sequence": "ATGAAGGTGAATGATCGGGTAACAGTCAAAACGGATGGCGGTCCGCGTCGTCCTGGCGTGGTACTGGCAGTTGAGGAGTTTAGTGAAGGCACAATGTACCTGGTTTCGCTGGAAGACTACCCGCTCGGCATCTGGTTCTTTAATGAAGCAGGGCATCAGGACGGTATCTTTGTGGAGAAAGCAGAGTAA", - "dna_sequence_length": 189, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1940", - "location": [ - [ - "NC_000913", - 2024823, - "-", - 189 - ] - ], - "md5": "31ddfd23f6836be1959289ef74b2c252", - "parent_gene": "", - "protein_md5": "5972148c0e82168c630cd5564dfe2049", - "protein_translation": "MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVSLEDYPLGIWFFNEAGHQDGIFVEKAE", - "protein_translation_length": 62, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1951" - ], - [ - "gene_synonym", - "EcoGene:EG14387" - ], - [ - "gene_synonym", - "NP_416463.4" - ], - [ - "gene_synonym", - "GeneID:946469" - ], - [ - "gene_synonym", - "ASAP:ABE-0006488" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64519" - ], - [ - "gene_synonym", - "GI:90111359" - ], - [ - "gene_synonym", - "b1953" - ], - [ - "gene_synonym", - "yodD" - ], - [ - "gene_synonym", - "JW5317" - ] - ], - "dna_sequence": "ATGAAAACCGCAAAAGAGTACAGCGATACCGCAAAACGTGAGGTCAGCGTCGATGTCGATGCCCTGCTGGCGGCGATCAATGAAATTAGCGAAAGCGAAGTTCATCGCAGCCAGAACGATTCTGAACACGTTAGCGTCGATGGACGTGAATATCATACATGGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGA", - "dna_sequence_length": 228, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1941", - "location": [ - [ - "NC_000913", - 2024986, - "+", - 228 - ] - ], - "md5": "bf46642c2ff22093f162e32b658e9dee", - "parent_gene": "", - "protein_md5": "72e2520f273898f23d559569705062d9", - "protein_translation": "MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHVSVDGREYHTWRELADAFELDIHDFSVSEVNR", - "protein_translation_length": 75, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1953" - ], - [ - "gene_synonym", - "GeneID:946472" - ], - [ - "gene_synonym", - "ASAP:ABE-0006493" - ], - [ - "gene_synonym", - "EcoGene:EG14039" - ], - [ - "gene_synonym", - "JW1938" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76329" - ], - [ - "gene_synonym", - "b1955" - ], - [ - "gene_synonym", - "NP_416464.1" - ], - [ - "gene_synonym", - "GI:16129901" - ], - [ - "gene_synonym", - "yedP" - ] - ], - "dna_sequence": "ATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGCCCCCTGGCTCACCCGTTTACGCGAAGCAAATGTTCCCGTCATTCTCTGTAGCAGTAAAACATCAGCGGAAATGCTGTACTTGCAAAAAACGTTGGGGCTACAAGGTTTACCGCTGATTGCCGAAAATGGCGCAGTGATCCAGCTTGCTGAGCAATGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCGCCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACAGTTTATGCAGGGTGCGCGCTTCTGGCACGTACTGGATGCTTCTGCCGGAAAAGATCAGGCTGCCAACTGGATTATCGCGACCTATCAACAATTGTCAGGCAAACGCCCAACCACACTTGGCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAA", - "dna_sequence_length": 816, - "functions": [ - "putative mannosyl-3-phosphoglycerate phosphatase" - ], - "id": "CDS_1942", - "location": [ - [ - "NC_000913", - 2025511, - "+", - 816 - ] - ], - "md5": "4eb2f8e8d729e33e748dadb215765e92", - "parent_gene": "", - "protein_md5": "1687c17ee4de11b3e6c0b710eeee0895", - "protein_translation": "MFSIQQPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFSAR", - "protein_translation_length": 271, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006495" - ], - [ - "gene_synonym", - "ECK1954" - ], - [ - "gene_synonym", - "GeneID:946471" - ], - [ - "gene_synonym", - "GI:90111360" - ], - [ - "gene_synonym", - "b1956" - ], - [ - "gene_synonym", - "NP_416465.2" - ], - [ - "gene_synonym", - "EcoGene:EG14040" - ], - [ - "gene_synonym", - "JW5832" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76330" - ], - [ - "gene_synonym", - "yedQ" - ] - ], - "dna_sequence": "GTGCAGCACGAGACAAAAATGGAAAACCAGAGCTGGTTGAAAAAACTCGCACGCCGCCTGGGGCCTGGTCATGTCGTTAATCTCTGCTTTATCGTGGTATTGCTTTTTTCCACCTTGCTCACCTGGCGTGAAGTGGTGGTGCTGGAAGATGCCTATATCTCCAGCCAGCGTAATCATCTGGAAAACGTTGCCAACGCGCTCGATAAGCATTTGCAGTATAACGTCGACAAACTGATCTTTTTACGTAATGGCATGCGCGAAGCTCTCGTAGCGCCACTGGATTTCACCTCTCTGCGTGATGCTGTAACCGAGTTCGAACAGCATCGCGACGAGCACGCCTGGAAAATCGAACTCAACCGACGACGCACTCTGCCAGTTAATGGTGTGTCGGATGCATTAGTCAGCGAGGGGAATCTCCTGTCTCGCGAAAATGAAAGCCTCGACAATGAAATTACCGCTGCACTGGAAGTTGGTTACTTGCTGCGACTAGCGCACAACTCCTCGTCGATGGTTGAACAGGCGATGTATGTCTCGCGTGCCGGATTTTACGTTTCGACGCAGCCGACCTTGTTTACGCGCAATGTTCCAACGCGTTATTACGGCTATGTCACCCAACCCTGGTTTATTGGCCATTCACAACGAGAAAATCGTCACCGCGCGGTACGCTGGTTCACTTCGCAACCGGAACACGCCAGCAATACTGAACCGCAGGTTACCGTCAGTGTTCCGGTAGACAGTAATAACTACTGGTATGGCGTGCTGGGGATGAGTATTCCCGTGCGTACTATGCAGCAATTTTTAAGAAACGCCATCGATAAAAACCTCGATGGTGAGTATCAGCTCTATGACAGTAAGCTGAGATTTTTGACCTCTTCCAATCCTGACCATCCAACAGGGAATATTTTTGATCCTCGTGAACTGGCCTTGCTGGCGCAGGCAATGGAACATGACACGCGGGGCGGCATTCGTATGGACAGTCGCTATGTTAGCTGGGAACGTCTGGACCATTTCGACGGTGTGCTGGTGCGTGTCCATACGTTAAGCGAAGGCGTGCGCGGCGATTTCGGCAGTATCAGCATTGCATTAACCCTGCTGTGGGCGCTCTTTACCACCATGTTACTCATCTCCTGGTATGTGATTCGCCGGATGGTTAGCAACATGTATGTTCTGCAAAGCTCGTTGCAGTGGCAGGCGTGGCACGACACCTTAACGCGTTTATATAACCGTGGCGCACTGTTCGAAAAAGCCCGTCCGCTCGCTAAATTGTGTCAGACGCACCAACATCCTTTTTCTGTCATTCAGGTCGATCTTGACCATTTTAAAGCGATTAATGACCGCTTTGGTCATCAGGCGGGCGACCGTGTTCTTTCTCATGCTGCCGGATTAATTAGCAGTTCCTTGCGTGCGCAGGACGTTGCCGGGCGGGTCGGTGGTGAGGAGTTTTGTGTGATTCTGCCAGGCGCGAGTCTGACGGAGGCTGCGGAGGTCGCAGAACGTATTCGACTGAAATTAAATGAAAAAGAGATGTTGATCGCCAAGAGTACGACGATACGCATCAGTGCCTCGCTGGGGGTAAGCAGCAGCGAGGAAACCGGTGATTATGATTTTGAACAACTCCAGTCACTGGCCGACCGTCGGCTTTATCTCGCTAAACAGGCTGGGCGTAATCGGGTATTCGCGAGCGATAACGCTTAA", - "dna_sequence_length": 1695, - "functions": [ - "putative membrane-anchored diguanylate cyclase" - ], - "id": "CDS_1943", - "location": [ - [ - "NC_000913", - 2028017, - "-", - 1695 - ] - ], - "md5": "6d0ac748dbc98bcbaa4709c765a93869", - "parent_gene": "", - "protein_md5": "dfb05719311e347e3e251dfe957c3b39", - "protein_translation": "MQHETKMENQSWLKKLARRLGPGHVVNLCFIVVLLFSTLLTWREVVVLEDAYISSQRNHLENVANALDKHLQYNVDKLIFLRNGMREALVAPLDFTSLRDAVTEFEQHRDEHAWKIELNRRRTLPVNGVSDALVSEGNLLSRENESLDNEITAALEVGYLLRLAHNSSSMVEQAMYVSRAGFYVSTQPTLFTRNVPTRYYGYVTQPWFIGHSQRENRHRAVRWFTSQPEHASNTEPQVTVSVPVDSNNYWYGVLGMSIPVRTMQQFLRNAIDKNLDGEYQLYDSKLRFLTSSNPDHPTGNIFDPRELALLAQAMEHDTRGGIRMDSRYVSWERLDHFDGVLVRVHTLSEGVRGDFGSISIALTLLWALFTTMLLISWYVIRRMVSNMYVLQSSLQWQAWHDTLTRLYNRGALFEKARPLAKLCQTHQHPFSVIQVDLDHFKAINDRFGHQAGDRVLSHAAGLISSSLRAQDVAGRVGGEEFCVILPGASLTEAAEVAERIRLKLNEKEMLIAKSTTIRISASLGVSSSEETGDYDFEQLQSLADRRLYLAKQAGRNRVFASDNA", - "protein_translation_length": 564, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64517" - ], - [ - "gene_synonym", - "ECK1955" - ], - [ - "gene_synonym", - "GeneID:946466" - ], - [ - "gene_synonym", - "NP_416466.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006498" - ], - [ - "gene_synonym", - "EcoGene:EG14307" - ], - [ - "gene_synonym", - "b1957" - ], - [ - "gene_synonym", - "JW1940" - ], - [ - "gene_synonym", - "GI:16129903" - ], - [ - "gene_synonym", - "yodC" - ] - ], - "dna_sequence": "ATGAGCTTTATGGTTAGTGAGGAAGTTACGGTTAAAGAGGGCGGCCCGCGGATGATTGTCACTGGATACTCCAGCGGTATGGTTGAGTGTCGTTGGTATGACGGTTACGGGGTCAAGCGGGAAGCTTTTCATGAAACCGAGCTTGTTCCGGGGGAGGGGAGTCGTTCTGCGGAAGAAGTGTGA", - "dna_sequence_length": 183, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1944", - "location": [ - [ - "NC_000913", - 2028370, - "-", - 183 - ] - ], - "md5": "c543cbe4e0b3a8b36a0155ebbbecba36", - "parent_gene": "", - "protein_md5": "d2701625661e9ab22487ce301bc6f4de", - "protein_translation": "MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETELVPGEGSRSAEEV", - "protein_translation_length": 60, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416467.1" - ], - [ - "gene_synonym", - "GeneID:946465" - ], - [ - "gene_synonym", - "ECK1956" - ], - [ - "gene_synonym", - "yedI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46125" - ], - [ - "gene_synonym", - "ASAP:ABE-0006500" - ], - [ - "gene_synonym", - "JW1941" - ], - [ - "gene_synonym", - "EcoGene:EG12709" - ], - [ - "gene_synonym", - "b1958" - ], - [ - "gene_synonym", - "GI:16129904" - ] - ], - "dna_sequence": "ATGCTTTTGGCCGGGAGTAGTTTACTGACGTTGCTCGATGATATCGCCACACTACTGGACGATATCTCCGTGATGGGCAAACTGGCGGCGAAGAAAACCGCCGGTGTATTAGGGGATGACTTATCGCTCAATGCGCAACAAGTTTCAGGCGTGCGGGCCAACCGGGAACTTCCCGTGGTCTGGGGCGTGGCGAAAGGATCGCTGATTAATAAAGTGATTCTGGTGCCGCTGGCGCTGATCATCAGTGCGTTTATCCCGTGGGCGATTACGCCTCTGTTGATGATTGGTGGCGCGTTTCTCTGCTTTGAAGGAGTAGAGAAAGTGCTGCATATGCTGGAGGCGCGTAAACATAAAGAAGATCCGGCGCAGAGCCAGCAGCGTCTGGAGAAGCTGGCGGCGCAGGATCCGCTGAAGTTTGAAAAGGACAAAATAAAAGGGGCGATTCGTACCGATTTTATATTGTCTGCGGAAATCGTCGCCATCACGCTGGGGATTGTGGCCGAAGCGCCGTTGCTTAATCAGGTGCTGGTGCTTTCAGGCATCGCGCTGGTAGTGACCGTGGGCGTCTACGGTCTGGTAGGGGTTATCGTTAAGATTGATGACCTGGGGTATTGGCTGGCGGAAAAATCCAGCGCGCTGATGCAGGCATTAGGTAAAGGGTTATTGATTATCGCGCCCTGGCTGATGAAAGCGTTATCGATTGTCGGCACGCTGGCGATGTTCCTCGTCGGCGGTGGGATTGTGGTACATGGAATTGCGCCGCTGCATCACGCCATTGAACATTTCGCCGGGCAGCAAAGTGCAGTAGTGGCGATGATATTACCGACTGTTTTAAATCTGATTCTTGGATTTATCATCGGCGGCATCGTGGTGCTGGGAGTGAAAGCCGTAGAGAAAATGCGCGGTCAGGCACATTAA", - "dna_sequence_length": 918, - "functions": [ - "DUF808 family inner membrane protein" - ], - "id": "CDS_1945", - "location": [ - [ - "NC_000913", - 2029366, - "-", - 918 - ] - ], - "md5": "a185cb4d1163665d763ada200aeebe80", - "parent_gene": "", - "protein_md5": "3cb5ad5b981e0e6ab0d4e7742a86aeb5", - "protein_translation": "MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKMRGQAH", - "protein_translation_length": 305, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416468.1" - ], - [ - "gene_synonym", - "GeneID:946461" - ], - [ - "gene_synonym", - "ASAP:ABE-0006505" - ], - [ - "gene_synonym", - "ECK1957" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA70" - ], - [ - "gene_synonym", - "yedA" - ], - [ - "gene_synonym", - "EcoGene:EG11141" - ], - [ - "gene_synonym", - "JW1942" - ], - [ - "gene_synonym", - "GI:16129905" - ], - [ - "gene_synonym", - "b1959" - ] - ], - "dna_sequence": "ATGCGTTTCCGCCAGTTGTTACCGCTTTTTGGCGCGCTGTTTGCGTTGTATATCATTTGGGGCTCAACCTATTTTGTCATTCGGATTGGCGTGGAAAGCTGGCCTCCGTTAATGATGGCGGGCGTTCGATTCCTGGCAGCCGGTATTTTATTGCTGGCATTTTTGCTACTGCGCGGACACAAACTCCCCCCGCTACGTCCGCTGCTCAATGCCGCGCTGATTGGCCTGTTATTGCTGGCTGTCGGTAATGGCATGGTGACGGTTGCCGAACATCAAAATGTTCCTTCCGGCATCGCCGCCGTAGTGGTTGCAACCGTGCCCCTCTTTACCCTGTGCTTCAGCCGCCTGTTTGGCATTAAAACGCGCAAACTGGAATGGGTGGGTATTGCCATTGGGCTTGCCGGAATCATCATGCTCAATAGCGGTGGAAATTTAAGCGGCAATCCGTGGGGCGCGATTCTGATTTTAATCGGCTCGATTAGCTGGGCGTTTGGCTCAGTTTATGGCTCGCGCATTACCTTACCTGTAGGGATGATGGCGGGTGCGATTGAGATGCTGGCGGCAGGCGTGGTGTTAATGATCGCGTCGATGATTGCGGGTGAAAAACTGACGGCGCTCCCTTCCCTTTCAGGCTTCCTTGCGGTCGGCTATCTGGCGCTGTTTGGTTCGATTATCGCCATCAACGCTTATATGTATTTAATCCGTAATGTCAGTCCGGCTCTCGCCACCAGCTACGCTTACGTTAACCCGGTGGTCGCGGTCTTGCTGGGTACGGGACTGGGTGGAGAAACACTGTCGAAGATTGAATGGCTGGCGCTCGGCGTAATTGTCTTCGCGGTGGTACTGGTCACGTTGGGAAAATATCTCTTCCCGGCAAAACCCGTAGTTGCGCCAGTTATTCAGGACGCATCAAGCGAGTAA", - "dna_sequence_length": 921, - "functions": [ - "amino acid exporter for phenylalanine, threonine" - ], - "id": "CDS_1946", - "location": [ - [ - "NC_000913", - 2029539, - "+", - 921 - ] - ], - "md5": "326c598996319f13f4069a9b931977ea", - "parent_gene": "", - "protein_md5": "e463060f1d1389b4bb91f341fbe49000", - "protein_translation": "MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGHKLPPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIKTRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSISWAFGSVYGSRITLPVGMMAGAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLFPAKPVVAPVIQDASSE", - "protein_translation_length": 306, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946476" - ], - [ - "gene_synonym", - "vsr" - ], - [ - "gene_synonym", - "ASAP:ABE-0006507" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09184" - ], - [ - "gene_synonym", - "ECK1958" - ], - [ - "gene_synonym", - "NP_416469.1" - ], - [ - "gene_synonym", - "EcoGene:EG11068" - ], - [ - "gene_synonym", - "b1960" - ], - [ - "gene_synonym", - "JW1943" - ], - [ - "gene_synonym", - "GI:16129906" - ] - ], - "dna_sequence": "ATGGCCGACGTTCACGATAAGGCCACTCGCAGCAAAAATATGCGCGCGATTGCCACGCGTGATACGGCGATAGAGAAGCGCCTCGCCAGTCTGTTAACCGGGCAGGGCCTGGCATTTCGCGTTCAGGACGCCAGTCTGCCCGGACGTCCGGATTTTGTCGTTGATGAATATCGCTGCGTGATATTTACCCATGGCTGCTTCTGGCATCATCATCACTGCTATCTGTTTAAAGTGCCTGCGACTCGAACCGAGTTCTGGCTGGAGAAGATAGGTAAAAATGTTGAGCGCGATCGCCGCGATATCAGTCGCTTGCAGGAACTCGGCTGGCGCGTATTGATTGTCTGGGAGTGCGCGTTACGTGGGCGCGAGAAGCTGACGGATGAAGCGCTTACCGAGCGTCTGGAAGAGTGGATCTGCGGCGAAGGTGCCAGCGCGCAGATCGACACGCAGGGGATTCATTTACTCGCTTGA", - "dna_sequence_length": 471, - "functions": [ - "DNA mismatch endonuclease of very short patch repair" - ], - "id": "CDS_1947", - "location": [ - [ - "NC_000913", - 2030918, - "-", - 471 - ] - ], - "md5": "38835cbd041fbbdab6c1c6e0aa33d462", - "parent_gene": "", - "protein_md5": "19aa71c30b8ed43655882964282d5077", - "protein_translation": "MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDASLPGRPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA", - "protein_translation_length": 156, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AED9" - ], - [ - "gene_synonym", - "dcm" - ], - [ - "gene_synonym", - "mec" - ], - [ - "gene_synonym", - "NP_416470.1" - ], - [ - "gene_synonym", - "ECK1959" - ], - [ - "gene_synonym", - "ASAP:ABE-0006509" - ], - [ - "gene_synonym", - "EcoGene:EG10211" - ], - [ - "gene_synonym", - "GeneID:946479" - ], - [ - "gene_synonym", - "JW1944" - ], - [ - "gene_synonym", - "b1961" - ], - [ - "gene_synonym", - "GI:16129907" - ] - ], - "dna_sequence": "ATGCAGGAAAATATATCAGTAACCGATTCATACAGCACCGGGAATGCCGCACAGGCAATGCTGGAGAAACTGCTGCAAATTTATGATGTTAAAACGTTGGTGGCGCAGCTTAATGGTGTAGGTGAGAATCACTGGAGCGCGGCAATTTTAAAACGTGCGCTGGCGAATGACTCGGCATGGCACCGTTTAAGTGAGAAAGAGTTCGCCCATCTGCAAACGTTATTACCCAAACCACCGGCACATCATCCGCATTATGCGTTTCGCTTTATCGATCTATTCGCCGGAATTGGCGGCATCCGTCGCGGTTTTGAATCGATTGGCGGACAGTGCGTGTTTACCAGCGAATGGAACAAACATGCGGTACGCACTTATAAAGCCAACCATTATTGCGATCCGGCGACGCATCATTTTAATGAAGATATCCGCGACATCACCCTCAGCCATAAAGAAGGCGTGAGTGATGAGGCGGCGGCGGAACATATTCGTCAACACATTCCTGAACACGATGTTTTACTGGCCGGTTTCCCTTGTCAGCCATTTTCGCTGGCTGGCGTATCGAAAAAGAACTCGCTCGGGCGGGCGCACGGTTTTGCCTGCGATACCCAGGGCACGCTGTTTTTTGATGTGGTACGCATTATCGACGCGCGTCGTCCGGCGATGTTTGTGCTCGAAAACGTCAAAAACCTGAAAAGTCACGACCAGGGTAAAACGTTCCGCATCATCATGCAGACGCTGGACGAACTGGGCTATGACGTGGCTGATGCAGAAGATAATGGGCCAGACGATCCGAAAATCATCGACGGCAAACATTTTCTGCCGCAGCACCGTGAACGCATCGTGCTGGTGGGTTTTCGTCGCGATCTGAATCTGAAAGCCGATTTTACCCTGCGTGATATCAGCGAATGTTTCCCTGCGCAGCGAGTGACGCTGGCGCAGCTGTTGGACCCGATGGTCGAGGCGAAATATATCCTGACGCCGGTGCTGTGGAAGTACCTCTATCGATATGCGAAAAAACATCAGGCGCGCGGTAACGGCTTCGGTTATGGAATGGTTTATCCGAACAATCCGCAAAGCGTCACGCGTACGCTGTCTGCGCGTTATTACAAAGATGGCGCGGAAATTTTAATCGATCGCGGCTGGGATATGGCCACGGGTGAGAAAGACTTTGACGATCCGCTGAATCAGCAACATCGTCCACGTCGGTTAACGCCTCGGGAATGCGCGCGCTTAATGGGTTTTGAAGCGCCGGGAGAAGCGAAATTCCGTATTCCGGTTTCGGACACTCAGGCCTATCGCCAGTTCGGTAACTCGGTGGTCGTGCCGGTCTTTGCCGCGGTGGCAAAACTGCTTGAGCCAAAAATCAAACAGGCGGTGGCGTTGCGTCAGCAAGAGGCACAACATGGCCGACGTTCACGATAA", 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- ], - [ - "gene_synonym", - "JW1945" - ], - [ - "gene_synonym", - "b1962" - ], - [ - "gene_synonym", - "GI:16129908" - ], - [ - "gene_synonym", - "yedJ" - ], - [ - "gene_synonym", - "NP_416471.1" - ], - [ - "gene_synonym", - "EcoGene:EG12710" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46144" - ] - ], - "dna_sequence": "ATGGACTTACAACACTGGCAGGCACAGTTCGAAAACTGGTTGAAAAACCATCATCAGCACCAGGACGCGGCCCATGACGTGTGTCATTTTCGCCGCGTCTGGGCTACGGCACAGAAGCTGGCGGCAGATGACGATGTCGATATGCTGGTGATTTTAACCGCCTGTTATTTTCACGATATTGTGAGCCTGGCGAAAAATCATCCGCAAAGGCAGCGTTCTTCAATCCTGGCGGCAGAAGAGACGCGTCGCCTGCTCCGTGAAGAGTTCGAGCAATTTCCGGCGGAGAAAATCGAGGCCGTTTGTCATGCCATTGCCGCTCACAGTTTCAGCGCGCAAATCGCCCCCTTAACAACGGAAGCTAAAATTGTCCAGGATGCGGATCGGCTGGAAGCCCTGGGGGCGATTGGCCTGGCGCGCGTGTTTGCCGTTTCAGGGGCATTGGGCGTGGCGCTGTTTGATGGTGAAGATCCGTTCGCACAGCATCGCCCGCTTGATGATAAACGCTACGCGCTGGATCATTTCCAGACTAAGTTGCTGAAGCTACCGCAAACCATGCAAACCGCAAGAGGCAAGCAGCTGGCGCAGCACAACGCGCATTTTTTAGTCGAGTTTATGGCGAAGCTCAGTGCCGAACTGGCGGGGGAGAATGAAGGTGTCGATCACAAGGTGATAGATGCGTTTTCATCCGCTGGCTGA", - "dna_sequence_length": 696, - "functions": [ - "putative HD superfamily phosphohydrolase" - ], - "id": "CDS_1949", - "location": [ - [ - "NC_000913", - 2033079, - "-", - 696 - ] - ], - "md5": "5919d8ee378ebdabaa52269b374189b9", - "parent_gene": "", - "protein_md5": "248ed06db18050e8d1cf0b1672869aac", - "protein_translation": "MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADDDVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCHAIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQHRPLDDKRYALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEGVDHKVIDAFSSAG", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946477" - ], - [ - "gene_synonym", - "ASAP:ABE-0006514" - ], - [ - "gene_synonym", - "ECK1961" - ], - [ - "gene_synonym", - "JW1946" - ], - [ - "gene_synonym", - "b1963" - ], - [ - "gene_synonym", - "GI:90111361" - ], - [ - "gene_synonym", - "NP_416472.2" - ], - [ - "gene_synonym", - "EcoGene:EG14041" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76334" - ], - [ - "gene_synonym", - "yedR" - ] - ], - "dna_sequence": "GTGGAAAAATGTGACTTTTATCACATAATAGTACTAAGTCTGAATTTTCCGGGTTATCTCAAAATGGAATACGGTTCGACAAAGATGGAAGAGAGACTCTCTCGCAGCCCTGGCGGCAAACTGGCTTTGTGGGCTTTCTATACATGGTGTGGCTATTTCGTCTGGGCAATGGCGCGTTACATCTGGGTGATGAGCCGGATTCCCGATGCCCCCGTGTCGGGATTTGAAAGCGATTTAGGCTCTACCGCGGGAAAGTGGTTAGGGGCACTGGTCGGATTTTTATTTATGGCTCTGGTCGGGGCATTGTTAGGCAGCATTGCCTGGTACACCCGACCTCGTCCCGCACGTAGCAGACGCTATGAATAA", - "dna_sequence_length": 366, - "functions": [ - "inner membrane protein" - ], - "id": "CDS_1950", - "location": [ - [ - "NC_000913", - 2033484, - "-", - 366 - ] - ], - "md5": "6098e89e934cb537984732f623018664", - "parent_gene": "", - "protein_md5": "2142ab084d12d186e27a89307577d32b", - "protein_translation": "MEKCDFYHIIVLSLNFPGYLKMEYGSTKMEERLSRSPGGKLALWAFYTWCGYFVWAMARYIWVMSRIPDAPVSGFESDLGSTAGKWLGALVGFLFMALVGALLGSIAWYTRPRPARSRRYE", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0285097" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76335" - ], - [ - "gene_synonym", - "ECK1962" - ], - [ - "gene_synonym", - "EcoGene:EG14042" - ], - [ - "gene_synonym", - "ASAP:ABE-0006518" - ], - [ - "gene_synonym", - "b4496" - ], - [ - "gene_synonym", - "JW1948" - ], - [ - "gene_synonym", - "JW5319" - ], - [ - "gene_synonym", - "GeneID:2847763" - ], - [ - "gene_synonym", - "ASAP:ABE-0006521" - ], - [ - "gene_synonym", - "yedT" - ], - [ - "gene_synonym", - "ASAP:ABE-0006526" - ], - [ - "gene_synonym", - "JW1949" - ], - [ - "gene_synonym", - "yedS" - ] - ], - "dna_sequence": "ATGAAAAGAAAAGTTCTGGCAATGCTGGTCCCGGCGTTATTAGTTGCTGGCGCAGCAAATGCGGCTGAAGTCTATAATAAAGATGGTAATAAACTGGATTTGTACGGAAAAGTAGTGGGTCTGCACTACTTCTCTGATGATTCTGGCAGCGATGGCGACATGTCATATGCCCGTATCGGTTTCAAAGGTGAAACTCAGATCGCTGATCAATTCACTGGTTATGGTCAGTGGGAATTTAACATTGGCGCAAACGGTCCTGAAAGCGACAAGGGTAATACCGCAACGCGTCTGGCATTTGCAGGTTTAGGCTTTGGTCAGAATGGTACTTTCGACTATGGTCGTAACTACGGTGTCGTATATGACGTAGAAGCATGGACCGATATGCTGCCAGAATTTGGTGGCGATACCTATGCTGGCGCTGACAACTTCATGAACGGTCGTGCTAATGGTGTTGCAACCTACCGTAACAATGGCTTCTTTGGTTAGGTCGATGGCTTGAACTTTGCTTTGCAATATCAGGGTAATAATGAAAGTGGTGGACCATTCGGGCAGGAAGGTTCCGGTAGTGGTGATGGCCGTAGCCTTTCCAAAGAAAATGGTGATGGTTTCGGTATGTCAACATCCTACGACTTCGACTTCGGTTTAAGTCTGGGTGCTGCATATTCAAACTCTGATCGTTCAGATCGTCAGGTTGGAGTTGGTTTAAATGATCGTAACCATAGCAACAGAAATGCTGGTGGTGAAACCGCTGAAGCATGGACTGTTGGTGCAAAATATGATGCTAATAATGTGTATTTAGCAGCTATGTACGCTGAAACTCGCAATATGACCCCATATGGTGGTGGCGAGTTTGATAATGGTGAATCAAGATCAGCCATCGCTAACAAAACCCAAAACTTTGAAGTTGTTGCTCAGTATCAGTTCGACTTTGGCCTGCGCCCGTCCATCGCTTACCTGCAATCTAAAGGTAAGGATTTAGGCGGTTGGGCTCATGACGGCAACGGCGACCCACGTTACACCAATAAAGATCTGGTTAAATACGTTGATATTGGTGCGACCTACTACTTCAACAAAAACATGTCCACCTATGTTGATTACAAAATCAACCTGCTGGACAACGACGATGACTTCTACGAAGCAAACGGCATCGCTACCGATGATATCGTTGCTGTGGGCTTAGTCTACCAGTTCTAA", - "dna_sequence_length": 1194, - "id": "CDS_1951", - "location": [ - [ - "NC_000913", - 2034051, - "+", - 663 - ], - [ - "NC_000913", - 2034713, - "+", - 531 - ] - ], - "md5": "9e8d0f2dfe5b2633bcacf7d1811e7aac", - "parent_gene": "", - "protein_md5": "2cd0f042bf55ef5b3b4ae1692c9856dc", - "protein_translation": "MKRKVLAMLVPALLVAGAANAAEVYNKDGNKLDLYGKVVGLHYFSDDSGSDGDMSYARIGFKGETQIADQFTGYGQWEFNIGANGPESDKGNTATRLAFAGLGFGQNGTFDYGRNYGVVYDVEAWTDMLPEFGGDTYAGADNFMNGRANGVATYRNNGFFG", - "protein_translation_length": 161, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006529" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31658" - ], - [ - "gene_synonym", - "GI:16129913" - ], - [ - "gene_synonym", - "EcoGene:EG11755" - ], - [ - "gene_synonym", - "ECK1963" - ], - [ - "gene_synonym", - "gloC" - ], - [ - "gene_synonym", - "hchA" - ], - [ - "gene_synonym", - "GeneID:946481" - ], - [ - "gene_synonym", - "NP_416476.1" - ], - [ - "gene_synonym", - "b1967" - ], - [ - "gene_synonym", - "JW1950" - ], - [ - "gene_synonym", - "yedU" - ], - [ - "gene_synonym", - "yzzC" - ] - ], - "dna_sequence": "ATGACTGTTCAAACAAGTAAAAATCCGCAGGTCGATATTGCTGAAGATAATGCATTCTTCCCTTCAGAATATTCGCTTAGCCAATATACCAGTCCTGTCTCTGATCTTGATGGCGTGGACTATCCAAAACCTTATCGCGGTAAACATAAAATTCTGGTGATCGCCGCGGACGAACGTTATTTGCCGACCGATAACGGAAAACTGTTCTCGACCGGTAACCATCCGATTGAAACGTTGCTGCCGTTGTATCATCTCCATGCTGCAGGTTTCGAATTCGAAGTGGCGACCATTTCCGGTCTGATGACCAAGTTTGAATACTGGGCTATGCCGCACAAAGATGAAAAAGTAATGCCATTCTTTGAGCAGCATAAATCGTTGTTCCGCAATCCGAAGAAACTCGCGGATGTTGTTGCCAGCCTCAACGCTGATAGCGAATATGCAGCAATCTTTGTTCCTGGTGGTCATGGCGCACTTATTGGTTTACCTGAAAGCCAGGACGTGGCTGCCGCTTTACAGTGGGCAATCAAAAATGACCGTTTTGTTATCTCCCTTTGCCACGGCCCGGCGGCTTTTCTGGCGCTTCGCCACGGCGATAACCCACTGAATGGTTATTCCATTTGCGCATTCCCAGACGCCGCAGACAAACAAACGCCAGAGATTGGCTATATGCCGGGTCATCTCACCTGGTACTTCGGCGAAGAACTGAAGAAAATGGGCATGAATATCATTAATGACGACATCACCGGGCGAGTACATAAGGACCGTAAACTTCTCACCGGCGACAGTCCTTTTGCAGCGAATGCGTTGGGTAAACTGGCGGCGCAGGAAATGCTGGCAGCTTACGCGGGTTAA", - "dna_sequence_length": 852, - "functions": [ - "glyoxalase III and Hsp31 molecular chaperone" - ], - "id": "CDS_1952", - "location": [ - [ - "NC_000913", - 2035835, - "+", - 852 - ] - ], - "md5": "5c317ce51fa66664511958d3c9672534", - "parent_gene": "", - "protein_md5": "7494b152dbc6d95dabdd1b549511a731", - "protein_translation": "MTVQTSKNPQVDIAEDNAFFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWAMPHKDEKVMPFFEQHKSLFRNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFLALRHGDNPLNGYSICAFPDAADKQTPEIGYMPGHLTWYFGEELKKMGMNIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQEMLAAYAG", - "protein_translation_length": 283, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1964" - ], - [ - "gene_synonym", - "ASAP:ABE-0006531" - ], - [ - "gene_synonym", - "EcoGene:EG14044" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76339" - ], - [ - "gene_synonym", - "GeneID:946487" - ], - [ - "gene_synonym", - "NP_416477.1" - ], - [ - "gene_synonym", - "JW1951" - ], - [ - "gene_synonym", - "yedV" - ], - [ - "gene_synonym", - "b1968" - ], - [ - "gene_synonym", - "GI:16129914" - ] - ], - "dna_sequence": "ATGAAAAGACTATCTATAACCGTCCGTTTAACCTTGCTTTTTATATTGCTACTGTCTGTTGCTGGCGCCGGAATTGTCTGGACTCTCTATAATGGCCTGGCAAGTGAGTTGAAATGGCGCGATGATACAACACTCATTAACCGGACAGCGCAGATCAAGCAGTTGTTAATTGATGGGGTAAATCCAGATACGTTACCTGTGTACTTTAACCGGATGATGGATGTTAGTCAGGATATCTTGATTATTCATGGTGATAGCATCAATAAAATTGTTAACCGGACAAATGTCAGTGATGGCATGTTAAATAACATACCTGCTAGTGAGACAATCAGCGCAGCTGGCATTTACAGAAGCATTATTAATGATACAGAGATAGATGCTTTACGAATTAATATTGATGAAGTTTCGCCATCATTAACGGTTACTGTGGCTAAATTGGCTTCAGCCAGACATAACATGCTTGAACAGTATAAAATTAATAGCATTATAATTTGCATTGTCGCCATTGTACTTTGCTCAGTATTAAGTCCGCTGTTAATCAGAACGGGATTACGAGAGATCAAAAAGTTGAGTGGTGTAACGGAAGCGCTGAATTATAACGATAGCCGAGAGCCTGTTGAGGTTAGCGCATTACCGAGAGAACTAAAACCTCTTGGGCAGGCGTTGAATAAAATGCATCATGCTTTAGTCAAAGATTTTGAGCGTCTAAGTCAGTTTGCTGACGATCTCGCTCATGAACTTAGAACGCCAATTAATGCATTACTGGGTCAGAATCAGGTTACGCTCAGTCAAACCAGAAGTATCGCTGAATATCAAAAAACAATTGCCGGAAACATTGAAGAGCTGGAAAATATTTCGCGGTTAACAGAGAACATACTGTTTCTTGCCAGGGCAGATAAAAACAATGTTTTGGTGAAACTGGACTCGCTTTCTCTCAATAAGGAAGTCGAAAATTTGTTGGACTATCTTGAATACCTTTCAGACGAGAAAGAGATTTGCTTTAAGGTCGAGTGCAATCAGCAAATCTTTGCGGATAAAATTTTACTACAACGAATGTTATCGAATCTTATTGTTAATGCCATTAGATATTCGCCAGAAAAATCGCGTATTCATATAACCAGTTTTCTTGATACCAACAGCTATCTTAATATTGATATCGCCAGCCCTGGAACGAAAATTAATGAGCCTGAAAAACTCTTCCGTAGATTTTGGCGGGGAGATAATTCGCGTCATTCCGTAGGTCAGGGACTAGGCCTTTCTTTAGTCAAAGCGATTGCCGAATTGCATGGGGGAAGTGCTACGTATCACTATCTCAATAAGCATAATGTGTTCCGGATTACGTTACCGCAAAGAAATTAA", 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- "GeneID:946486" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76340" - ], - [ - "gene_synonym", - "GI:90111362" - ], - [ - "gene_synonym", - "yedW" - ], - [ - "gene_synonym", - "b1969" - ], - [ - "gene_synonym", - "NP_416478.2" - ], - [ - "gene_synonym", - "EcoGene:EG14045" - ], - [ - "gene_synonym", - "JW5322" - ] - ], - "dna_sequence": "ATGAAGATTCTACTTATTGAAGATAATCAAAGGACCCAGGAATGGGTAACGCAGGGGCTTTCCGAAGCGGGTTATGTCATCGATGCCGTTTCTGATGGCAGAGATGGGCTTTATCTTGCGCTGAAGGATGATTATGCATTGATCATTCTGGATATTATGCTTCCGGGTATGGATGGCTGGCAGATCTTACAAACGTTAAGAACAGCAAAGCAAACCCCTGTTATTTGCCTTACTGCAAGGGATTCTGTCGATGACAGAGTCAGAGGGCTGGACAGTGGGGCAAATGATTATCTGGTAAAACCTTTTTCATTTTCTGAGTTGCTGGCAAGGGTTCGGGCACAATTAAGGCAACATCACGCTTTGAATTCAACATTAGAAATCAGCGGCTTAAGAATGGACTCTGTTAGTCATAGTGTGAGCAGGGACAATATCAGTATTACACTGACGCGCAAGGAGTTTCAGTTACTTTGGCTACTGGCCTCCAGAGCTGGCGAAATTATACCCAGAACGGTTATTGCGAGTGAAATTTGGGGAATCAACTTTGATAGTGATACCAATACGGTGGACGTCGCCATTCGCAGGCTCCGCGCAAAAGTTGATGATCCTTTTCCTGAAAAGCTAATTGCCACAATCCGGGGGATGGGCTATTCATTCGTAGCGGTAAAAAAATAA", - "dna_sequence_length": 672, - "functions": [ - "response regulator family protein" - ], - "id": "CDS_1954", - "location": [ - [ - "NC_000913", - 2038823, - "-", - 672 - ] - ], - "md5": "ec03b4de76f5e95a1f3869909905f90f", - "parent_gene": "", - "protein_md5": "26d05622b687de863da3942771cb0e6a", - "protein_translation": "MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHHALNSTLEISGLRMDSVSHSVSRDNISITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSFVAVKK", - "protein_translation_length": 223, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006537" - ], - [ - "gene_synonym", - "ECK1966" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76341" - ], - [ - "gene_synonym", - "GeneID:946485" - ], - [ - "gene_synonym", - "NP_416479.1" - ], - [ - "gene_synonym", - "EcoGene:EG14046" - ], - [ - "gene_synonym", - "JW1953" - ], - [ - "gene_synonym", - "yedX" - ], - [ - "gene_synonym", - "b1970" - ], - [ - "gene_synonym", - "GI:16129916" - ], - [ - "gene_synonym", - "hiuH" - ] - ], - "dna_sequence": "ATGTTAAAGCGTTATTTAGTACTCTCGGTAGCAACGGCAGCATTTTCATTACCTTCTTTGGTTAATGCCGCACAACAAAACATTCTTAGCGTGCACATTTTGAACCAGCAAACAGGAAAACCCGCTGCTGACGTGACAGTCACTCTTGAAAAGAAGGCGGATAACGGCTGGTTACAACTTAATACCGCCAAAACAGATAAGGATGGACGAATTAAGGCACTGTGGCCCGAGCAAACTGCAACTACGGGCGATTACCGTGTCGTATTTAAAACCGGGGACTATTTCAAGAAACAAAATCTTGAAAGTTTCTTCCCTGAGATCCCCGTTGAATTTCATATTAATAAAGTGAACGAGCATTATCATGTGCCTTTATTACTTAGCCAATATGGGTATTCAACCTATCGTGGCAGTTAA", - "dna_sequence_length": 414, - "functions": [ - "hydroxyisourate hydrolase" - ], - "id": "CDS_1955", - "location": [ - [ - "NC_000913", - 2038956, - "+", - 414 - ] - ], - "md5": "cbdb50cceaa9055e970b280e01c48e3d", - "parent_gene": "", - "protein_md5": "028be27ae600539f0174b34194ec47af", - "protein_translation": "MLKRYLVLSVATAAFSLPSLVNAAQQNILSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLESFFPEIPVEFHINKVNEHYHVPLLLSQYGYSTYRGS", - "protein_translation_length": 137, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1967" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76342" - ], - [ - "gene_synonym", - "GeneID:946484" - ], - [ - "gene_synonym", - "JW1954" - ], - [ - "gene_synonym", - "ASAP:ABE-0006540" - ], - [ - "gene_synonym", - "NP_416480.1" - ], - [ - "gene_synonym", - "yedY" - ], - [ - "gene_synonym", - "EcoGene:EG14047" - ], - [ - "gene_synonym", - "b1971" - ], - [ - "gene_synonym", - "GI:16129917" - ] - ], - "dna_sequence": "ATGAAAAAGAATCAATTTTTAAAAGAATCAGATGTTACGGCCGAGTCGGTATTCTTTATGAAGCGTCGGCAGGTGTTAAAAGCACTGGGCATCAGTGCAACTGCACTTTCTTTGCCTCACGCTGCGCATGCCGATCTGCTTAGCTGGTTTAAAGGGAACGATCGCCCGCCCGCCCCCGCCGGAAAAGCGCTGGAGTTCAGCAAGCCTGCCGCCTGGCAAAATAACCTGCCACTGACGCCAGCAGATAAAGTTTCCGGTTATAATAACTTCTATGAATTCGGGCTGGATAAAGCCGATCCCGCCGCTAATGCTGGTAGCCTGAAAACCGATCCATGGACACTGAAAATCAGCGGCGAAGTGGCAAAACCATTGACCCTCGATCATGATGACTTAACCCGTCGCTTCCCGCTGGAAGAGCGTATTTATCGTATGCGCTGCGTGGAAGCGTGGTCGATGGTGGTGCCGTGGATTGGTTTTCCGCTGCACAAATTGCTGGCGCTTGCCGAACCTACCAGCAATGCGAAGTATGTCGCTTTCGAAACAATTTATGCACCGGAACAGATGCCAGGCCAGCAGGACCGCTTTATCGGCGGTGGGCTGAAATATCCTTATGTCGAAGGATTGCGTCTCGACGAAGCAATGCATCCGCTCACACTGATGACCGTAGGTGTTTATGGCAAGGCGTTACCGCCACAAAATGGCGCGCCGGTGCGACTGATTGTGCCGTGGAAATATGGCTTTAAAGGGATTAAATCGATAGTCAGTATTAAGCTGACCCGCGAGCGTCCGCCAACCACCTGGAATCTGGCAGCGCCTGACGAATACGGTTTTTACGCCAACGTTAATCCGTATGTTGATCACCCGCGCTGGTCACAGGCTACCGAACGATTTATTGGTTCAGGCGGCATCCTCGATGTACAGCGCCAGCCAACGCTACTGTTTAATGGTTACGCCGCCCAGGTGGCATCGCTGTATCGTGGCCTGGATTTGCGGGAGAATTTCTAA", - "dna_sequence_length": 1005, - "functions": [ - "membrane-anchored, periplasmic TMAO, DMSO reductase" - ], - "id": "CDS_1956", - "location": [ - [ - "NC_000913", - 2039478, - "+", - 1005 - ] - ], - "md5": "ebdbe9e6810e6c234410e942669ec979", - "parent_gene": "", - "protein_md5": "f118713619a340d055cd25732e6b3651", - "protein_translation": "MKKNQFLKESDVTAESVFFMKRRQVLKALGISATALSLPHAAHADLLSWFKGNDRPPAPAGKALEFSKPAAWQNNLPLTPADKVSGYNNFYEFGLDKADPAANAGSLKTDPWTLKISGEVAKPLTLDHDDLTRRFPLEERIYRMRCVEAWSMVVPWIGFPLHKLLALAEPTSNAKYVAFETIYAPEQMPGQQDRFIGGGLKYPYVEGLRLDEAMHPLTLMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLAAPDEYGFYANVNPYVDHPRWSQATERFIGSGGILDVQRQPTLLFNGYAAQVASLYRGLDLRENF", - "protein_translation_length": 334, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14048" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76343" - ], - [ - "gene_synonym", - "ECK1968" - ], - [ - "gene_synonym", - "ASAP:ABE-0006542" - ], - [ - "gene_synonym", - "GeneID:946483" - ], - [ - "gene_synonym", - "GI:16129918" - ], - [ - "gene_synonym", - "JW1955" - ], - [ - "gene_synonym", - "yedZ" - ], - [ - "gene_synonym", - "b1972" - ], - [ - "gene_synonym", - "NP_416481.1" - ] - ], - "dna_sequence": "ATGCGTCTGACAGCAAAACAGGTGACATGGCTGAAAGTTTGCCTGCATCTTGCCGGATTGTTGCCGTTTCTCTGGCTGGTCTGGGCGATCAATCACGGTGGACTGGGTGCCGATCCGGTGAAAGATATTCAGCATTTTACTGGTCGCACTGCACTGAAATTTTTGCTGGCGACCTTGTTAATCACCCCTCTGGCACGCTACGCAAAACAGCCGTTATTGATACGCACTCGCCGCCTGTTAGGATTATGGTGCTTTGCCTGGGCGACACTGCATTTAACAAGTTACGCATTGCTGGAGCTGGGCGTGAATAATCTGGCGTTATTAGGTAAGGAGTTAATTACCCGGCCTTATTTAACGTTAGGTATTATCAGCTGGGTAATTTTGCTTGCTTTAGCGTTCACTTCAACCCAGGCGATGCAGCGAAAACTCGGCAAGCACTGGCAACAGTTGCATAATTTCGTCTATCTTGTCGCGATTCTGGCCCCAATACATTATCTGTGGTCCGTGAAGATTATTTCACCGCAGCCGCTCATCTACGCTGGGCTGGCTGTACTGCTTTTAGCCTTACGGTATAAGAAGTTGCGTTCCCTTTTTAACCGGTTACGCAAGCAGGTTCACAACAAATTATCTGTATAA", - "dna_sequence_length": 636, - "functions": [ - "inner membrane heme subunit for periplasmic YedYZ reductase" - ], - "id": "CDS_1957", - "location": [ - [ - "NC_000913", - 2040483, - "+", - 636 - ] - ], - "md5": "a2cff9751cdf2a869221b7632d5dbe9e", - "parent_gene": "", - "protein_md5": "13b9f39d8eb471e07abed1c450160993", - "protein_translation": "MRLTAKQVTWLKVCLHLAGLLPFLWLVWAINHGGLGADPVKDIQHFTGRTALKFLLATLLITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGVNNLALLGKELITRPYLTLGIISWVILLALAFTSTQAMQRKLGKHWQQLHNFVYLVAILAPIHYLWSVKIISPQPLIYAGLAVLLLALRYKKLRSLFNRLRKQVHNKLSV", - "protein_translation_length": 211, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416482.1" - ], - [ - "gene_synonym", - "zinT" - ], - [ - "gene_synonym", - "EcoGene:EG14049" - ], - [ - "gene_synonym", - "ASAP:ABE-0006546" - ], - [ - "gene_synonym", - "ECK1969" - ], - [ - "gene_synonym", - "GeneID:946480" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76344" - ], - [ - "gene_synonym", - "JW1956" - ], - [ - "gene_synonym", - "GI:16129919" - ], - [ - "gene_synonym", - "yodA" - ], - [ - "gene_synonym", - "b1973" - ] - ], - "dna_sequence": "TTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGATGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAGATGATTGGCATTGAGGACGGCATTGTTGAATTCCATAGAAATAATGAAACAACATCGTGTAAATATGATTACGATGGATACAAAATACTCACCTATAAATCAGGCAAGAAAGGCGTTCGTTACTTATTCGAATGTAAAGATCCTGAAAGCAAAGCCCCTAAATATATACAATTTAGCGATCATATAATTGCACCACGAAAATCATCTCATTTTCACATTTTTATGGGTAATGATTCACAGCAATCTTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAGAAGTGGTCGAGGAAATGATGTCTCATTGA", - "dna_sequence_length": 651, - "functions": [ - "zinc and cadmium binding protein, periplasmic" - ], - "id": "CDS_1958", - "location": [ - [ - "NC_000913", - 2041375, - "+", - 651 - ] - ], - "md5": "005b1cce0789bd5d35607a182756ab2d", - "parent_gene": "", - "protein_md5": "0e2b87ec2c1d651ec955080831bc8690", - "protein_translation": "MAIRLYKLAVALGVFIVSAPAFSHGHHSHGKPLTEVEQKAANGVFDDANVQNRTLSDWDGVWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYHKGYATDIEMIGIEDGIVEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPKYIQFSDHIIAPRKSSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH", - "protein_translation_length": 216, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1970" - ], - [ - "gene_synonym", - "NP_416483.4" - ], - [ - "gene_synonym", - "GeneID:946491" - ], - [ - "gene_synonym", - "ASAP:ABE-0006552" - ], - [ - "gene_synonym", - "GI:90111363" - ], - [ - "gene_synonym", - "yodB" - ], - [ - "gene_synonym", - "b1974" - ], - [ - "gene_synonym", - "EcoGene:EG14050" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76345" - ], - [ - "gene_synonym", - "JW5323" - ] - ], - "dna_sequence": "ATGAACCGATTCTCAAAAACTCAAATTTATTTACATTGGATAACGCTGCTTTTCGTTGCAATAACCTATGCCGCGATGGAACTCCGTGGCTGGTTTCCTAAAGGTAGTAGTACTTATCTGCTGATGCGAGAAACACATTACAATGCGGGTATATTCGTTTGGGTGTTAATGTTTTCACGCCTGATTATAAAACACCGTTATAGTGATCCTTCTATTGTGCCACCGCCACCTGCCTGGCAAATGAAAGCGGCTTCGCTAATGCACATCATGCTTTATATAACCTTCCTTGCACTTCCTCTGCTGGGGATTGCTTTGATGGCTTACAGTGGAAAATCGTGGAGTTTCCTTGGTTTCAATGTGTCTCCCTTTGTTACCCCAAACAGCGAAATTAAAGCACTGATAAAAAATATTCACGAAACCTGGGCAAATATAGGCTACTTTTTAATCGCAGCTCACGCTGGCGCAGCACTCTTTCATCACTACATTCAGAAAGATAATACTCTGTTACGAATGATGCCTCGCCGCAAATAA", - "dna_sequence_length": 531, - "functions": [ - "cytochrome b561 homolog" - ], - "id": "CDS_1959", - "location": [ - [ - "NC_000913", - 2042368, - "+", - 531 - ] - ], - "md5": "a22aead1533e7adc2e25696cc663abd7", - "parent_gene": "", - "protein_md5": "f63325d1b682a48571ce979a37c9c1ae", - "protein_translation": "MNRFSKTQIYLHWITLLFVAITYAAMELRGWFPKGSSTYLLMRETHYNAGIFVWVLMFSRLIIKHRYSDPSIVPPPPAWQMKAASLMHIMLYITFLALPLLGIALMAYSGKSWSFLGFNVSPFVTPNSEIKALIKNIHETWANIGYFLIAAHAGAALFHHYIQKDNTLLRMMPRRK", - "protein_translation_length": 176, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yeeI" - ], - [ - "gene_synonym", - "ASAP:ABE-0006558" - ], - [ - "gene_synonym", - "ECK1972" - ], - [ - "gene_synonym", - "GeneID:946489" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76346" - ], - [ - "gene_synonym", - "GI:90111364" - ], - [ - "gene_synonym", - "mtfA" - ], - [ - "gene_synonym", - "EcoGene:EG13377" - ], - [ - "gene_synonym", - "b1976" - ], - [ - "gene_synonym", - "NP_416484.2" - ], - [ - "gene_synonym", - "JW1958" - ] - ], - "dna_sequence": "ATGATTAAGTGGCCCTGGAAAGTACAAGAATCAGCACATCAAACTGCCCTTCCCTGGCAGGAAGCACTATCGATCCCCCTTTTAACGTGTCTGACGGAACAGGAACAAAGCAAATTAGTCACTCTTGCCGAACGTTTTTTACAGCAAAAGCGGCTTGTTCCTTTACAGGGCTTTGAACTGGATTCATTAAGAAGCTGCCGGATAGCACTTCTATTTTGCCTACCCGTTCTGGAGTTAGGACTGGAATGGCTGGATGGTTTTCATGAAGTCTTAATTTATCCTGCGCCATTTGTGGTCGATGATGAATGGGAAGACGATATCGGTCTGGTGCATAACCAACGTATTGTTCAGTCAGGTCAGAGCTGGCAGCAAGGGCCTATCGTTTTGAACTGGTTGGATATACAAGATTCTTTTGATGCTTCTGGTTTTAACCTGATTATTCATGAAGTCGCTCATAAGCTGGACACCCGTAACGGCGATCGCGCCAGCGGAGTTCCCTTTATTCCGTTGCGTGAGGTTGCTGGCTGGGAACACGATCTTCATGCTGCAATGAACAACATTCAGGAAGAAATCGAATTGGTTGGCGAGAATGCGGCGAGCATTGATGCTTATGCAGCCAGCGATCCTGCTGAATGTTTTGCCGTACTTTCTGAATATTTCTTTAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCAGAGACTGCATCACGCTAATGATACAGACTCGTTTTCGGCGACGAATGTTCATTAA", - "dna_sequence_length": 798, - "functions": [ - "anti-repressor for DgsA(Mlc)" - ], - "id": "CDS_1960", - "location": [ - [ - "NC_000913", - 2043651, - "+", - 798 - ] - ], - "md5": "20f49bce1b9cbcf2d324ebfc75d41dad", - "parent_gene": "", - "protein_md5": "b6424b2fd8a2a7154cf2fe3b6d9e67f5", - "protein_translation": "MIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVTLAERFLQQKRLVPLQGFELDSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGDRASGVPFIPLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAPELFAPRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH", - "protein_translation_length": 265, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1974" - ], - [ - "gene_synonym", - "GeneID:946498" - ], - [ - "gene_synonym", - "EcoGene:EG13378" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76347" - ], - [ - "gene_synonym", - "yeeJ" - ], - [ - "gene_synonym", - "b1978" - ], - [ - "gene_synonym", - "NP_416485.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0006563" - ], - [ - "gene_synonym", - "JW5833" - ], - [ - "gene_synonym", - "GI:145698281" - ] - ], - "dna_sequence": "ATGGCTACGAAGAAGAGAAGTGGAGAAGAAATAAATGACCGACAAATATTATGCGGGATGGGAATTAAACTACGCCGCTTAACTGCGGGTATCTGTCTGATAACTCAACTTGCGTTCCCTATGGCTGCGGCAGCACAAGGTGTGGTAAACGCCGCAACCCAACAACCAGTTCCTGCACAAATTGCCATTGCAAATGCCAATACGGTGCCCTACACCCTTGGAGCGTTGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGTAATAGCAGTGACAACCTCGAGCAACAGATAGCCAGTACTTCACAGCAAATCGGGTCTCTGCTCGCCGAAGATATGAACAGCGAGCAAGCGGCAAATATGGCGCGTGGATGGGCCTCTTCTCAGGCTTCAGGCGCAATGACAGACTGGTTAAGCCGCTTCGGTACCGCAAGAATCACGCTGGGCGTGGATGAAGATTTTAGCCTGAAGAACTCCCAGTTCGATTTTCTCCATCCGTGGTATGAAACGCCTGATAATCTCTTTTTCAGTCAGCATACTCTCCATCGTACTGACGAGCGTACGCAGATTAACAACGGCTTAGGTTGGCGTCATTTCACTCCCACATGGATGTCGGGCATCAACTTCTTTTTCGACCACGATCTTAGCCGTTACCACTCCCGCGCCGGCATTGGCGCGGAGTACTGGCGCGACTATCTAAAATTAAGCAGTAACGGCTATTTGCGACTGACCAACTGGCGCAGCGCACCTGAACTGGACAACGATTATGAAGCACGCCCGGCCAATGGCTGGGATGTACGCGCAGAAAGCTGGCTACCCGCCTGGCCGCACCTTGGCGGTAAACTGGTCTATGAACAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTATACCCCCTTCCCGCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCTGGCAGCGCAATGCAGAAACAGCTTGACCCGAATGAAGTCGCTGCACGGCGTAGCCTTGCAGGCAGCCGTTATGATCTGGTGGATCGCAACAACAATATCGTTCTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGACAGACCCCGTGACAGGGAAGTCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTGGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGATAATGGTGACGGAAGCTATACCCAGATCCTGACCACAGGAGCGATGTCTGGCACGCTGACGCTGATGCCACAGCTGAATGGTGTGGATGCGGCTAAAGCCCCCGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGTGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCGAAAATTGCGACATTATCTGCCAGCAATAATGGTGTGCTCGCCAATGAGAATGCAGCAAACACCGTCTCGGTCAATGTCGCTGATGAAGGAAGCAACCCAATCAATGATCATACCGTCACGTTTGCGGTATTAAGCGGATCGGCAACTTCCTTCAACAATCAAAACACCGCAAAAACGGATGTTAATGGTCTGGCGACTTTTGATCTGAAAAGTAGTAAGCAGGAAGACAACACGGTTGAAGTCACCCTTGAAAATGGCGTGAAACAAACGTTAATCGTCAGTTTTGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTACGCTGACCAGTTTGAAAAATGGTGATTATAGGGTTACGGCCTCTGTGAGCTCTGGTTCCCAGGCTAATCAACAGGTGAATTTTATCGGTGATCAAAGTACTGCTGCCCTGACCCTCAGTGTGCCTTCAGGTGATATCACCGTCACCAACACAGCTCCGCAATATATGACTGCAACCTTGCAGGATAAAAATGGCAACCCACTAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGTTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAATCATCCGGTGGCGGGGATAACGGTAAACTTCACCATGCCACAGGACGTTGCGGCAAACTTTACCCTTGAAAATAACGGTATTGCCATCACTCAGGCCAATGGGGAAGCGCATGTCACGCTGAAAGGTAAAAAAGCGGGCACGCATACGGTTACCGCAACGCTGGGTAATAACAATACCAGTGATTCGCAGCCGGTAACATTTGTGGCGGACAAAGCCTCGGCTCAGGTTGTCCTGCAGATATCAAAAGATGAGATCACAGGTAATGGCGTCGATAGCGCAACGCTAACTGCAACGGTTAAAGATCAGTTCGACAATGAGGTGAATAATCTTCCGGTAACATTCAGCTCAGCCTCTTCAGGACTCACCCTGACCCCGGGAGTAAGTAATACCAACGAGTCTGGCATCGCGCAGGCCACTCTCGCAGGCGTTGCCTTTGGTGAGAAGACGGTTACTGCATCACTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCCCGCAGAACAGCTCCGGCAGCGTCATCACCGCCACAGTCGTTGATAATAATGGCTTTCCGGTGAAAGGTGTGACTGTGAACTTCACCAGCAACGCAGCGACAGCCGAAATGACGAACGGCGGTCAAGCCGTGACGAACGAACAGGGTAAGGCTACCGTCACTTATACCAATACCCGCTCCTCGATAGAATCAGGAGCGAGACCGGATACCGTTGAGGCCAGTCTGGAAAATGGTAGCTCCACGCTTAGCACATCAATTAATGTCAACGCTGATGCGTCTACGGCACATCTCACCTTGCTACAGGCACTTTTTGATACAGTCTCCGCAGGCGAGACAACCAGTCTGTATATTGAGGTGAAGGATAATTACGGCAACGGTGTCCCCCAGCAGGAGGTAACCCTCAGCGTTTCACCAAGTGAAGGCGTGACCCCCAGTAATAACGCTATATATACTACCAACCACGACGGCAATTTTTACGCAAGCTTTACCGCTACAAAAGCCGGGGTTTATCAATTGACGGCAACCCTCGAAAATGGCGATTCGATGCAACAAACAGTGACCTATGTGCCGAACGTCGCGAATGCTGAAATCACGCTGGCAGCCTCGAAGGATCCGGTGATTGCCGACAATAACGATCTCACGACACTAACAGCAACAGTCGCTGATACAGAGGGCAATGCGATAGCCAACACTGAGGTAACATTTACTCTGCCGGAAGATGTGAAGGCGAACTTCACGCTGAGCGATGGCGGTAAAGTGATTACTGATGCTGAAGGCAAAGCGAAAGTCACGCTGAAAGGTACAAAAGCAGGCGCTCATACTGTTACAGCATCGATGACTGGCGGTAAGAGTGAGCAGTTGGTGGTGAACTTTATTGCGGATACGCTCACTGCGCAGGTTAATCTTAACGTTACCGAGGACAATTTTATCGCTAATAACGTCGGGATGACCAGGCTGCAGGCAACAGTGACTGATGGAAACGGCAACCCGTTAGCCAATGAGGCGGTGACATTCACGCTACCGGCAGATGTGAGCGCAAGCTTTACTCTCGGACAAGGCGGTTCCGCCATTACTGATATCAACGGCAAGGCTGAAGTTACACTGAGCGGTACAAAATCCGGCACCTACCCCGTGACAGTTAGCGTGAACAATTATGGTGTCAGTGATACGAAACAGGTGACTTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTGAAATTCTTGTGACAAGCACCGAGGTCGGACTGAAAACAGTTTCAGCCTCTCTGGCAGATAAACCTACTGAAGTCATCTCGCGATTACTGAATGCCAGTGCAGATGTTAATTCTGCGACGATTACCAGTCTGGAGATACCGGAAGGTCAGGTAATGGTCGCACAAGACGTAGCAGTTAAAGCTCACGTTAACGACCAGTTTGGCAACCCGGTTGCGCATCAACCCGTGACATTCAGTGCAGAGCCATCCTCGCAAATGATCATCAGCCAGAATACGGTCTCTACTAATACGCAGGGTGTAGCCGAGGTCACCATGACGCCCGAAAGAAACGGTTCGTATATGGTGAAAGCATCCCTGCCGAATGGAGCCTCACTTGAGAAACAACTGGAGGCTATTGATGAAAAACTGACACTCACGGCGTCCAGTCCGCTTATCGGTGTCTATGCCCCTACAGGCGCTACTCTGACGGCAACGCTAACCTCTGCAAATGGCACTCCAGTGGAGGGTCAGGTCATCAACTTTAGCGTAACGCCAGAAGGGGCGACGTTAAGTGGCGGAAAAGTGAGAACTAACTCTTCAGGTCAGGCTCCAGTCGTTTTGACCAGCAATAAAGTCGGTACATATACGGTGACTGCATCTTTCCATAACGGCGTAACAATACAGACACAGACAACCGTGAAAGTCACTGGCAACTCAAGCACCGCCCATGTTGCTAGCTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGGCAGTGGTAACCTGATCGAAGGTCTCACTGTGTACTTCGCCTTAAAAAGCGGCTCTGCCACATTAACGTCATTAACAGCGGTGACCGATCAAAACGGAATCGCGACAACAAGCGTGAAAGGAGCGATGACAGGTAGCGTCACGGTAAGCGCAGTCACGACCGCTGGTGGAATGCAAACAGTAGATATAACGCTGGTGGCTGGCCCGGCAGACACCTCGCAGTCCGTCCTTAAGAGCAATCGGTCATCACTGAAAGGGGACTATACCGATAGTGCTGAATTACGTCTTGTTCTGCACGATATATCAGGCAATCCGATCAAAGTTTCTGAAGGGATGGAATTTGTGCAATCAGGTACTAACGTGCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGTCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCGGGGCGTATTATCAGTTGAATAATGACAACTTTGCCCCAGGAAAAACGGCGGCTGATTATGAGTTTTCAAGCTCTGCCTCCTGGGTCGATGTTGATGCTACCGGTAAAGTGACATTTAAAAATGTCGGCAGCAATTCGGAAAGGATTACGGCGACGCCAAAATCAGGAGGCCCTAGCTATGTATACGAAATCCGTGTGAAGAGTTGGTGGGTGAACGCCGGCGAGGCTTTCATGATATACAGCCTTGCTGAAAATTTTTGCAGCAGCAATGGCTACACGCTCCCCAGAGCAAACTATTTAAACCACTGTAGTTCCCGAGGCATCGGGTCACTGTACAGTGAATGGGGAGATATGGGGCATTACACGACTGACGCTGGTTTTCAATCAAATATGTATTGGTCATCTAGTCCCGCAAACTCAAGCGAACAATACGTAGTTTCCCTGGCAACAGGTGATCAAAGCGTATTTGAAAAGCTTGGGTTTGCTTATGCGACATGTTATAAAAACCTGTGA", - "dna_sequence_length": 7077, - "functions": [ - "putative adhesin" - ], - "id": "CDS_1961", - "location": [ - [ - "NC_000913", - 2044938, - "+", - 7077 - ] - ], - "md5": "65842eabfd3787e7c389fd6ad2c53add", - "parent_gene": "", - "protein_md5": "ebe9ca2733ca0276efc28ac7d5b9b0fb", - "protein_translation": "MATKKRSGEEINDRQILCGMGIKLRRLTAGICLITQLAFPMAAAAQGVVNAATQQPVPAQIAIANANTVPYTLGALESAQSVAERFGISVAELRKLNQFRTFARGFDNVRQGDELDVPAQVSEKKLTPPPGNSSDNLEQQIASTSQQIGSLLAEDMNSEQAANMARGWASSQASGAMTDWLSRFGTARITLGVDEDFSLKNSQFDFLHPWYETPDNLFFSQHTLHRTDERTQINNGLGWRHFTPTWMSGINFFFDHDLSRYHSRAGIGAEYWRDYLKLSSNGYLRLTNWRSAPELDNDYEARPANGWDVRAESWLPAWPHLGGKLVYEQYYGDEVALFDKDDRQSNPHAITAGLNYTPFPLMTFSAEQRQGKQGENDTRFAVDFTWQPGSAMQKQLDPNEVAARRSLAGSRYDLVDRNNNIVLEYRKKELVRLTLTDPVTGKSGEVKSLVSSLQTKYALKGYNVEATALEAAGGKVVTTGKDILVTLPAYRFTSTPETDNTWPIEVTAEDVKGNLSNREQSMVVVQAPTLSQKDSSVSLSTQTLNADSHSTATLTFIAHDAAGNPVVGLVLSTRHEGVQDITLSDWKDNGDGSYTQILTTGAMSGTLTLMPQLNGVDAAKAPAVVNIISVSSSRTHSSIKIDKDRYLSGNPIEVTVELRDENDKPVKEQKQQLNNAVSIDNVKPGVTTDWKETADGVYKATYTAYTKGSGLTAKLLMQNWNEDLHTAGFIIDANPQSAKIATLSASNNGVLANENAANTVSVNVADEGSNPINDHTVTFAVLSGSATSFNNQNTAKTDVNGLATFDLKSSKQEDNTVEVTLENGVKQTLIVSFVGDSSTAQVDLQKSKNEVVADGNDSVTMTATVRDAKGNLLNDVMVTFNVNSAEAKLSQTEVNSHDGIATATLTSLKNGDYRVTASVSSGSQANQQVNFIGDQSTAALTLSVPSGDITVTNTAPQYMTATLQDKNGNPLKDKEITFSVPNDVASKFSISNGGKGMTDSNGVAIASLTGTLAGTHMIMARLANSNVSDAQPMTFVADKDRAVVVLQTSKAEIIGNGVDETTLTATVKDPSNHPVAGITVNFTMPQDVAANFTLENNGIAITQANGEAHVTLKGKKAGTHTVTATLGNNNTSDSQPVTFVADKASAQVVLQISKDEITGNGVDSATLTATVKDQFDNEVNNLPVTFSSASSGLTLTPGVSNTNESGIAQATLAGVAFGEKTVTASLANNGASDNKTVHFIGDTAAAKIIELAPVPDSIIAGTPQNSSGSVITATVVDNNGFPVKGVTVNFTSNAATAEMTNGGQAVTNEQGKATVTYTNTRSSIESGARPDTVEASLENGSSTLSTSINVNADASTAHLTLLQALFDTVSAGETTSLYIEVKDNYGNGVPQQEVTLSVSPSEGVTPSNNAIYTTNHDGNFYASFTATKAGVYQLTATLENGDSMQQTVTYVPNVANAEITLAASKDPVIADNNDLTTLTATVADTEGNAIANTEVTFTLPEDVKANFTLSDGGKVITDAEGKAKVTLKGTKAGAHTVTASMTGGKSEQLVVNFIADTLTAQVNLNVTEDNFIANNVGMTRLQATVTDGNGNPLANEAVTFTLPADVSASFTLGQGGSAITDINGKAEVTLSGTKSGTYPVTVSVNNYGVSDTKQVTLIADAGTAKLASLTSVYSFVVSTTEGATMTASVTDANGNPVEGIKVNFRGTSVTLSSTSVETDDRGFAEILVTSTEVGLKTVSASLADKPTEVISRLLNASADVNSATITSLEIPEGQVMVAQDVAVKAHVNDQFGNPVAHQPVTFSAEPSSQMIISQNTVSTNTQGVAEVTMTPERNGSYMVKASLPNGASLEKQLEAIDEKLTLTASSPLIGVYAPTGATLTATLTSANGTPVEGQVINFSVTPEGATLSGGKVRTNSSGQAPVVLTSNKVGTYTVTASFHNGVTIQTQTTVKVTGNSSTAHVASFIADPSTIAATNTDLSTLKATVEDGSGNLIEGLTVYFALKSGSATLTSLTAVTDQNGIATTSVKGAMTGSVTVSAVTTAGGMQTVDITLVAGPADTSQSVLKSNRSSLKGDYTDSAELRLVLHDISGNPIKVSEGMEFVQSGTNVPYIKISAIDYSLNINGDYKATVTGGGEGIATLIPVLNGVHQAGLSTTIQFTRAEDKIMSGTVSVNGTDLPTTTFPSQGFTGAYYQLNNDNFAPGKTAADYEFSSSASWVDVDATGKVTFKNVGSNSERITATPKSGGPSYVYEIRVKSWWVNAGEAFMIYSLAENFCSSNGYTLPRANYLNHCSSRGIGSLYSEWGDMGHYTTDAGFQSNMYWSSSPANSSEQYVVSLATGDQSVFEKLGFAYATCYKNL", - "protein_translation_length": 2358, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1975" - ], - [ - "gene_synonym", - "yeeL" - ], - [ - "gene_synonym", - "yeeK" - ], - [ - "gene_synonym", - "ASAP:ABE-0285098" - ], - [ - "gene_synonym", - "b4497" - ], - [ - "gene_synonym", - "ASAP:ABE-0006565" - ], - [ - "gene_synonym", - "GeneID:2847764" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76349" - ], - [ - "gene_synonym", - "EcoGene:EG13380" - ], - [ - "gene_synonym", - "JW5325" - ], - [ - "gene_synonym", - "ASAP:ABE-0006568" - ], - [ - "gene_synonym", - "JW1961" - ] - ], - "dna_sequence": "ATGTTTTTAGCATCATTGTTGAGACGTATTGCATTTAGTTACTACGATTATAAAGCTTATAATTTCAATATTGAAAAAACAGACTTTGTTGTCATCCATATTCCCGATCAGATTGGCGATGCTATGGCCATCTTTCCTGTTATTCGGGCGCTTGAATTGCATAAAATTAAGCATCTTTTAATTGTAACGTCGACAATTAATTTAGAAGTCTTTAATGCGCTTAAACTTGAACAGACTAAATTAACATTAGTCACAATGACTATGCAGGATCACGCAACATTAAAAGAAATAAAAGATTTAGCAAAGAACATAACACAGCAATACGGTACGCCGGATCTTTGCATTGAGGGGATGCGTAAAAAGAACCTGAAAACGATGTTATTTATCAGTCAGTTGAAAGCAAAAACGAATTTTCAGGTTGTTGGTATAACCATGAATTGCTTCTCCCCTTTGTGCAAGAACGCGTCCAGTATGGATCAGAAACTCCGGGCTCCCGTACCTATGACATGGGCATTTATGATGCGTGAGGCGGGTTTTCCAGCAGTCAGGCCAATATATGAATTGCCACTAAGTGAGGATGTACTCGATGAGGTGCGCGAGGAAATGCGATCGTTAGGATCTTACATTGCGTTCAATTTAGAAGGTAGCTCGCAGGAACGTACATTTTCATTATCGATTGCAGAAAATCTAATAGCAAAAATTTAAAGTGAAACAGATATACCAATAGTGATCGTTCATGGACCCAAAGGTGAAGATAAAGCCAGGGCATTAGTGGATTGTTATAATAATGTCTACCGTTTATCCTTACCACCCTCGATTAAACGTTCAGCAGCAATCATAAAAGATGCTTATATCGCAATAACTCCTGACACCTCAATATTACATATGGCAAGTGCCTATAATACCCCTGTTGTTGCAATTTATGCTGATTACAAAACGCGATGGCCCGCAATGGCCGATGTCTCGGAGTCAGTCGTCGTTGGGCAAAAAATTGACAATATAAGTCTGGATGAATTCGCAAAGGCATTAAAAAGTGTTTTGGCGAGAATATGA", - "dna_sequence_length": 1053, - "id": "CDS_1962", - "location": [ - [ - "NC_000913", - 2053328, - "-", - 1053 - ] - ], - "md5": "b3ec2a7c08ccaa5ea01b2b8277a4e05b", - "parent_gene": "", - "protein_md5": "84b51356060b14938d3c6f976e1fdb75", - "protein_translation": "MFLASLLRRIAFSYYDYKAYNFNIEKTDFVVIHIPDQIGDAMAIFPVIRALELHKIKHLLIVTSTINLEVFNALKLEQTKLTLVTMTMQDHATLKEIKDLAKNITQQYGTPDLCIEGMRKKNLKTMLFISQLKAKTNFQVVGITMNCFSPLCKNASSMDQKLRAPVPMTWAFMMREAGFPAVRPIYELPLSEDVLDEVREEMRSLGSYIAFNLEGSSQERTFSLSIAENLIAKI", - "protein_translation_length": 234, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1976" - ], - [ - "gene_synonym", - "yeeM" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76350" - ], - [ - "gene_synonym", - "EcoGene:EG20205" - ], - [ - "gene_synonym", - "shiA" - ], - [ - "gene_synonym", - "b1981" - ], - [ - "gene_synonym", - "GeneID:946495" - ], - [ - "gene_synonym", - "GI:16129925" - ], - [ - "gene_synonym", - "NP_416488.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006572" - ], - [ - "gene_synonym", - "JW1962" - ] - ], - "dna_sequence": "ATGGACTCCACGCTCATCTCCACTCGTCCCGATGAAGGGACGCTTTCGTTAAGTCGCGCCCGACGAGCTGCGTTAGGCAGCTTCGCTGGTGCCGTCGTCGACTGGTATGATTTTTTACTCTATGGCATCACCGCCGCACTGGTGTTTAATCGCGAGTTTTTCCCGCAAGTAAGCCCGGCGATGGGAACGCTCGCCGCATTTGCTACCTTTGGCGTCGGATTTCTTTTCCGTCCGCTCGGCGGTGTCATTTTCGGTCACTTTGGCGACCGACTGGGACGTAAGCGCATGTTAATGCTGACCGTCTGGATGATGGGCATCGCGACAGCCTTGATTGGTATTCTTCCTTCATTCTCGACCATTGGGTGGTGGGCACCTATTTTGCTGGTGACACTGCGTGCCATTCAGGGATTTGCAGTCGGCGGCGAATGGGGAGGCGCGGCGTTGCTTTCCGTTGAAAGTGCACCGAAAAATAAAAAAGCCTTTTACAGTAGCGGTGTACAAGTTGGCTACGGTGTAGGTTTACTGCTTTCAACCGGACTGGTTTCATTGATCAGTATGATGACGACTGACGAACAGTTTTTAAGCTGGGGCTGGCGCATTCCTTTCCTGTTTAGCATCGTACTGGTACTGGGAGCATTGTGGGTGCGCAATGGCATGGAGGAGTCCGCGGAATTTGAACAACAGCAACATTATCAAGCTGCCGCGAAAAAACGCATCCCGGTTATCGAAGCGCTGTTACGACATCCCGGTGCTTTCCTGAAGATTATTGCGCTACGACTGTGCGAATTGCTGACGATGTACATCGTTACTGCCTTTGCACTTAATTATTCAACCCAGAATATGGGGCTACCGCGCGAACTTTTCCTTAATATTGGTTTGCTGGTAGGTGGATTAAGCTGCCTGACAATTCCCTGTTTTGCCTGGCTTGCCGATCGTTTTGGTCGCCGTAGGGTTTATATCACAGGTACGTTAATCGGAACGTTGAGCGCATTTCCTTTCTTTATGGCGCTTGAAGCACAATCTATTTTCTGGATAGTTTTCTTCTCCATAATGCTGGCAAACATTGCGCATGACATGGTGGTGTGTGTGCAACAACCGATGTTTACCGAAATGTTTGGTGCCAGTTATCGCTATAGTGGCGCTGGAGTCGGTTATCAGGTTGCCAGTGTGGTTGGCGGTGGATTTACACCTTTTATTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGA", - "dna_sequence_length": 1317, - "functions": [ - "shikimate transporter" - ], - "id": "CDS_1963", - "location": [ - [ - "NC_000913", - 2053643, - "+", - 1317 - ] - ], - "md5": "249c0c86c5835666039cb20a319348b3", - "parent_gene": "", - "protein_md5": "5b282db12288b928e45fdf9f03e3f0b6", - "protein_translation": "MDSTLISTRPDEGTLSLSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVIFGHFGDRLGRKRMLMLTVWMMGIATALIGILPSFSTIGWWAPILLVTLRAIQGFAVGGEWGGAALLSVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLGALWVRNGMEESAEFEQQQHYQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNMGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGTLIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALITYFAGNWHSVAIYLLAGCLISAMTALLMKDSQRA", - "protein_translation_length": 438, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1977" - ], - [ - "gene_synonym", - "ASAP:ABE-0006579" - ], - [ - "gene_synonym", - "NP_416489.1" - ], - [ - "gene_synonym", - "EcoGene:EG10039" - ], - [ - "gene_synonym", - "amn" - ], - [ - "gene_synonym", - "b1982" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE12" - ], - [ - "gene_synonym", - "GeneID:946508" - ], - [ - "gene_synonym", - "GI:16129926" - ], - [ - "gene_synonym", - "JW1963" - ] - ], - "dna_sequence": "ATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATAAACTCGACGCGCTGTATGAGCAATCTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGTCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTACACCACCACGATTACTCGCCCTACTCTCTTTCGTTCGTATCTTAATGAACAACTTACGTTGCTGTATCAGGATTATGGTGCGCATATCTCAGTGCAACCCTCGCAGCATGAAATCCCTTATCCTTATGTCATCGATGGCTCTGAATTGACACTTGATCGCTCAATGAGCGCTGGGTTAACTCGCTACTTCCCGACAACAGAACTGGCGCAAATTGGCGATGAAACTGCAGACGGCATTTATCATCCAACTGAATTCTCCCCGCTATCGCATTTTGATGCGCGCCGCGTCGATTTTTCCCTCGCACGGTTGCGCCATTATACCGGTACGCCAGTTGAACATTTTCAGCCGTTCGTCTTGTTTACCAACTACACACGTTATGTGGATGAATTCGTTCGTTGGGGATGCAGCCAGATCCTCGATCCTGATAGTCCCTACATTGCCCTTTCTTGTGCTGGCGGGAACTGGATCACCGCCGAAACCGAAGCGCCAGAAGAAGCCATTTCCGACCTTGCATGGAAAAAACATCAGATGCCAGCATGGCATTTAATTACCGCCGATGGTCAGGGTATTACTCTGGTGAATATTGGCGTGGGACCGTCAAATGCTAAAACCATCTGCGATCATCTGGCAGTGCTACGCCCGGATGTCTGGTTGATGATTGGTCACTGTGGCGGATTACGTGAAAGTCAGGCCATTGGCGATTATGTACTTGCACACGCTTATTTACGCGATGACCACGTTCTTGATGCGGTTCTGCCGCCCGATATTCCTATTCCGAGCATTGCTGAAGTGCAACGTGCGCTTTATGACGCCACCAAGCTGGTGAGCGGCAGGCCCGGTGAGGAAGTCAAACAGCGGCTACGTACTGGTACTGTGGTAACCACAGATGACAGGAACTGGGAATTACGTTACTCAGCTTCTGCACTTCGTTTTAACTTAAGCCGGGCCGTAGCAATTGATATGGAAAGTGCAACCATTGCCGCGCAAGGATATCGTTTCCGCGTGCCATACGGGACACTACTGTGTGTTTCAGATAAACCGTTGCATGGCGAGATTAAACTTCCCGGCCAGGCTAACCGTTTTTATGAAGGCGCTATTTCCGAACATCTGCAAATTGGCATTCGGGCGATCGATTTGCTGCGCGCAGAAGGCGACCGACTGCATTCGCGTAAATTACGAACCTTTAATGAGCCGCCGTTCCGATAA", - "dna_sequence_length": 1455, - "functions": [ - "AMP nucleosidase" - ], - "id": "CDS_1964", - "location": [ - [ - "NC_000913", - 2055061, - "+", - 1455 - ] - ], - "md5": "4dc4d05b73d4896ae818594255665805", - "parent_gene": "", - "protein_md5": "a4a016f7af3c77b2fbb0869da4729061", - "protein_translation": "MNNKGSGLTPAQALDKLDALYEQSVVALRNAIGNYITSGELPDENARKQGLFVYPSLTVTWDGSTTNPPKTRAFGRFTHAGSYTTTITRPTLFRSYLNEQLTLLYQDYGAHISVQPSQHEIPYPYVIDGSELTLDRSMSAGLTRYFPTTELAQIGDETADGIYHPTEFSPLSHFDARRVDFSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGCSQILDPDSPYIALSCAGGNWITAETEAPEEAISDLAWKKHQMPAWHLITADGQGITLVNIGVGPSNAKTICDHLAVLRPDVWLMIGHCGGLRESQAIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKLVSGRPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAVAIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLLRAEGDRLHSRKLRTFNEPPFR", - "protein_translation_length": 484, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yeeN" - ], - [ - "gene_synonym", - "NP_416490.1" - ], - [ - "gene_synonym", - "EcoGene:EG13382" - ], - [ - "gene_synonym", - "GeneID:946493" - ], - [ - "gene_synonym", - "ECK1978" - ], - [ - "gene_synonym", - "b1983" - ], - [ - "gene_synonym", - "ASAP:ABE-0006582" - ], - [ - "gene_synonym", - "GI:16129927" - ], - [ - "gene_synonym", - "JW1964" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8A2" - ] - ], - "dna_sequence": "GTGGGACGTAAATGGGCCAATATTGTTGCTAAAAAAACGGCTAAAGACGGTGCAACGTCTAAAATTTATGCAAAATTCGGTGTAGAAATCTATGCTGCTGCTAAACAAGGTGAACCCGATCCAGAATTAAACACATCTTTAAAATTCGTTATTGAACGTGCAAAGCAGGCACAAGTTCCAAAGCACGTTATTGATAAAGCAATTGATAAAGCCAAAGGCGGCGGAGATGAAACGTTCGTGCAGGGACGTTATGAAGGCTTTGGTCCTAATGGCTCAATGATTATCGCCGAGACATTGACTTCAAATGTTAACCGTACGATTGCTAACGTTCGCACAATTTTCAATAAAAAAGGCGGCAATATCGGAGCGGCAGGTTCTGTCAGCTATATGTTTGACAATACGGGTGTGATTGTATTTAAAGGGACAGACCCTGACCATATTTTTGAAATTTTACTTGAAGCTGAAGTTGATGTTCGTGATGTGACTGAAGAAGAAGGTAACATTGTTATTTATACTGAACCTACTGACCTTCATAAAGGAATCGCGGCTCTAAAAGCAGCTGGAATCACTGAGTTCTCAACAACAGAATTAGAAATGATTGCTCAATCTGAAGTTGAGCTTTCCCCAGAAGATTTAGAAATCTTTGAAGGGCTTGTTGATGCCCTTGAAGATGACGACGATGTACAAAAAGTTTATCATAACGTCGCAAATCTCTAA", - "dna_sequence_length": 717, - "functions": [ - "UPF0082 family protein" - ], - "id": "CDS_1965", - "location": [ - [ - "NC_000913", - 2056858, - "+", - 717 - ] - ], - "md5": "8573833410cfa7648fb5fffda7d7d9ca", - "parent_gene": "", - "protein_md5": "91f3bc2cc5f1320647f1e1fb1479af44", - "protein_translation": "MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELNTSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSNVNRTIANVRTIFNKKGGNIGAAGSVSYMFDNTGVIVFKGTDPDHIFEILLEAEVDVRDVTEEEGNIVIYTEPTDLHKGIAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKVYHNVANL", - "protein_translation_length": 238, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yeeO" - ], - [ - "gene_synonym", - "ECK1980" - ], - [ - "gene_synonym", - "EcoGene:EG13383" - ], - [ - "gene_synonym", - "NP_416491.2" - ], - [ - "gene_synonym", - "b1985" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76352" - ], - [ - "gene_synonym", - "GeneID:946506" - ], - [ - "gene_synonym", - "JW1965" - ], - [ - "gene_synonym", - "GI:226524727" - ], - [ - "gene_synonym", - "ASAP:ABE-0006586" - ] - ], - "dna_sequence": "ATGTGGTTTCACTTTCTGCAATTAAGGTCGGCTTTGAATATCTCCTCTGCTTTACGCCAGGTTGTTCACGGCACTCGCTGGCACGCTAAACGCAAGAGCTACAAAGTGTTGTTCTGGCGCGAGATAACCCCGCTTGCTGTTCCTATCTTCATGGAGAATGCCTGTGTCCTGTTGATGGGGGTTCTGAGCACTTTTCTGGTCAGCTGGCTGGGAAAAGATGCGATGGCCGGCGTGGGATTGGCGGACAGCTTCAATATGGTCATTATGGCTTTTTTTGCTGCTATCGATCTTGGTACTACTGTCGTTGTGGCATTTAGTCTCGGTAAGCGGGATCGACGACGAGCGAGGGTGGCGACGCGGCAGTCATTGGTGATCATGACGTTGTTTGCCGTACTGTTGGCAACGCTTATTCATCATTTTGGCGAACAAATTATTGATTTCGTCGCGGGTGATGCCACGACAGAAGTTAAAGCACTGGCGTTGACTTATCTGGAGCTGACGGTACTCAGTTATCCAGCAGCTGCCATCACTCTTATTGGTAGCGGGGCACTTCGTGGTGCAGGGAATACGAAAATACCGCTATTGATTAACGGTAGCCTGAATATTCTTAATATTATTATTAGCGGCATATTGATTTACGGCCTTTTCTCCTGGCCGGGACTGGGATTTGTCGGGGCAGGGCTGGGTTTAACCATTTCTCGTTATATTGGCGCAGTTGCAATTTTGTGGGTGCTGGCGATTGGTTTTAATCCTGCGCTAAGGATTTCGTTAAAGAGCTATTTTAAACCGCTGAATTTTAGCATTATCTGGGAAGTCATGGGGATTGGTATTCCCGCGAGTGTCGAATCAGTGTTATTTACCAGTGGTCGGTTATTAACCCAAATGTTCGTTGCCGGGATGGGGACCAGTGTTATTGCCGGAAATTTTATCGCGTTTTCAATTGCGGCTCTTATCAACTTACCCGGAAGTGCGCTCGGCTCTGCTTCTACGATCATTACAGGCCGAAGGTTGGGGGTAGGGCAGATAGCGCAAGCAGAGATTCAGTTGCGGCATGTGTTCTGGCTTTCCACTCTTGGATTAACGGCCATCGCCTGGCTAACGGCTCCCTTTGCCGGGGTTATGGCATCGTTTTACACCCAGGATCCACAGGTTAAACATGTCGTTGTGATTCTGATTTGGCTAAATGCTTTATTTATGCCTATTTGGTCCGCCTCATGGGTGCTACCCGCTGGATTTAAAGGTGCTCGTGATGCCCGTTACGCCATGTGGGTTTCGATGTTGAGCATGTGGGGTTGTCGGGTTGTAGTCGGTTATGTGCTGGGAATCATGCTTGGCTGGGGTGTGGTTGGTGTCTGGATGGGAATGTTTGCCGACTGGGCTGTGCGGGCCGTGCTGTTTTACTGGCGAATGGTTACTGGACGTTGGCTATGGAAATACCCTCGACCCGAGCCGCAAAAGTGTGAAAAAAAGCCAGTTGTGTCGGAATAA", - "dna_sequence_length": 1488, - "functions": [ - "putative multdrug exporter, MATE family" - ], - "id": "CDS_1966", - "location": [ - [ - "NC_000913", - 2059690, - "-", - 1488 - ] - ], - "md5": "76d33c23f7a42845b091e3b877da9400", - "parent_gene": "", - "protein_md5": "c5a87cb03ccb03b68669484d14269604", - "protein_translation": "MWFHFLQLRSALNISSALRQVVHGTRWHAKRKSYKVLFWREITPLAVPIFMENACVLLMGVLSTFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGTTVVVAFSLGKRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQIIDFVAGDATTEVKALALTYLELTVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYGLFSWPGLGFVGAGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNFSIIWEVMGIGIPASVESVLFTSGRLLTQMFVAGMGTSVIAGNFIAFSIAALINLPGSALGSASTIITGRRLGVGQIAQAEIQLRHVFWLSTLGLTAIAWLTAPFAGVMASFYTQDPQVKHVVVILIWLNALFMPIWSASWVLPAGFKGARDARYAMWVSMLSMWGCRVVVGYVLGIMLGWGVVGVWMGMFADWAVRAVLFYWRMVTGRWLWKYPRPEPQKCEKKPVVSE", - "protein_translation_length": 495, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1982" - ], - [ - "gene_synonym", - "cbl" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47083" - ], - [ - "gene_synonym", - "GI:16129929" - ], - [ - "gene_synonym", - "b1987" - ], - [ - "gene_synonym", - "EcoGene:EG14264" - ], - [ - "gene_synonym", - "ASAP:ABE-0006590" - ], - [ - "gene_synonym", - "JW1966" - ], - [ - "gene_synonym", - "NP_416492.1" - ], - [ - "gene_synonym", - "GeneID:946502" - ] - ], - "dna_sequence": "GTGAATTTCCAACAACTAAAGATAATCCGCGAGGCTGCACGTCAGGATTACAACCTGACAGAGGTTGCGAATATGCTTTTTACCTCACAGTCAGGCGTCAGCCGTCATATTCGGGAACTGGAGGATGAACTTGGCATCGAAATATTTGTTCGACGAGGTAAGCGACTGCTGGGCATGACTGAACCGGGCAAAGCATTACTGGTCATTGCAGAACGTATTCTGAATGAAGCCAGTAATGTTCGTCGGCTTGCAGACCTGTTTACCAACGATACGTCTGGCGTTCTCACTATTGCAACGACGCATACTCAGGCACGTTATAGCTTGCCAGAGGTCATTAAAGCTTTTCGCGAACTTTTCCCGGAGGTTCGGCTCGAGCTAATCCAGGGGACGCCACAGGAAATTGCGACATTGTTGCAAAATGGCGAAGCTGATATTGGTATCGCCAGCGAGCGTTTGAGTAATGACCCGCAGCTCGTCGCCTTCCCGTGGTTTCGTTGGCACCATAGTTTGCTTGTTCCACACGATCATCCCTTGACGCAAATTTCACCATTGACGCTGGAATCAATAGCGAAGTGGCCGTTAATCACTTACCGACAGGGGATTACGGGGCGCTCACGTATTGATGACGCATTTGCCCGCAAAGGTTTGCTGGCAGATATTGTATTAAGTGCGCAGGATTCTGATGTCATTAAAACCTATGTTGCTCTTGGGCTTGGGATCGGATTAGTTGCCGAGCAATCCAGTGGCGAACAAGAGGAAGAGAATTTAATCCGCCTGGATACGCGGCATCTTTTTGATGCTAATACTGTCTGGTTGGGACTGAAGCGAGGACAACTTCAGCGTAACTATGTCTGGCGCTTTCTGGAACTTTGTAATGCAGGACTGTCAGTTGAGGATATCAAGCGGCAGGTGATGGAAAGCAGTGAAGAGGAAATTGATTATCAGATATAG", - "dna_sequence_length": 951, - "functions": [ - "ssuEADCB/tauABCD operon transcriptional activator" - ], - "id": "CDS_1967", - "location": [ - [ - "NC_000913", - 2060914, - "-", - 951 - ] - ], - "md5": "514e92ee44e837f0e210875566e3ef66", - "parent_gene": "", - "protein_md5": "fef30d4c9e0272bdb7e00d090bbb769b", - "protein_translation": "MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFVRRGKRLLGMTEPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATTHTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADIGIASERLSNDPQLVAFPWFRWHHSLLVPHDHPLTQISPLTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGIGLVAEQSSGEQEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDIKRQVMESSEEEIDYQI", - "protein_translation_length": 316, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "nac" - ], - [ - "gene_synonym", - "GeneID:946501" - ], - [ - "gene_synonym", - "ECK1983" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47005" - ], - [ - "gene_synonym", - "GI:16129930" - ], - [ - "gene_synonym", - "EcoGene:EG14265" - ], - [ - "gene_synonym", - "JW1967" - ], - [ - "gene_synonym", - "b1988" - ], - [ - "gene_synonym", - "ASAP:ABE-0006594" - ], - [ - "gene_synonym", - "NP_416493.1" - ] - ], - "dna_sequence": "ATGAACTTCAGACGCCTGAAATACTTCGTAAAAATTGTAGATATTGGTAGCCTGACCCAGGCTGCTGAAGTATTGCATATCGCACAACCAGCGCTCAGCCAGCAGGTTGCCACACTGGAAGGTGAGTTAAATCAACAACTTTTGATCCGTACAAAGCGGGGCGTTACACCAACAGACGCCGGAAAAATTCTCTATACCCATGCGCGGGCCATTTTACGTCAGTGTGAACAGGCCCAACTGGCGGTGCATAACGTTGGTCAGGCATTATCGGGGCAAGTCTCGATTGGCTTTGCACCAGGAACCGCTGCGTCATCCATCACCATGCCCTTATTACAGGCGGTTCGCGCTGAATTTCCGGAGATCGTTATCTATCTTCATGAAAATAGTGGTGCAGTGCTTAACGAAAAATTGATAAATCACCAACTCGATATGGCGGTGATTTATGAGCATTCCCCTGTGGCTGGTGTATCCAGTCAGGCTTTGCTGAAAGAAGATCTTTTTCTGGTAGGAACTCAAGATTGCCCGGGGCAAAGCGTTGATGTGAATGCTATTGCGCAAATGAACCTCTTTCTCCCCAGTGATTACAGTGCTATTAGACTTCGTGTTGATGAGGCTTTTTCCCTACGGCGACTCACGGCAAAAGTTATTGGTGAAATTGAGTCTATTGCCACGCTTACCGCAGCGATTGCCAGCGGCATGGGCGTTGCAGTATTACCCGAATCGGCCGCGCGTTCGTTATGTGGCGCAGTAAATGGGTGGATGTCACGCATTACCACTCCTTCCATGAGTCTCTCTTTGTCATTAAATTTACCCGCCAGAGCGAACTTATCGCCACAGGCACAGGCAGTGAAAGAGTTGTTAATGTCAGTGATTAGTTCTCCAGTGATGGAAAAAAGGCAGTGGCAATTGGTGAGCTAA", - "dna_sequence_length": 918, - "functions": [ - "nitrogen assimilation regulon transcriptional regulator", - "autorepressor" - ], - "id": "CDS_1968", - "location": [ - [ - "NC_000913", - 2061933, - "-", - 918 - ] - ], - "md5": "c830730a0ecb945edbb2a1166a9a7b5a", - "parent_gene": "", - "protein_md5": "42afa4a741ddc33f47f045646e6cbbb2", - "protein_translation": "MNFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGELNQQLLIRTKRGVTPTDAGKILYTHARAILRQCEQAQLAVHNVGQALSGQVSIGFAPGTAASSITMPLLQAVRAEFPEIVIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQALLKEDLFLVGTQDCPGQSVDVNAIAQMNLFLPSDYSAIRLRVDEAFSLRRLTAKVIGEIESIATLTAAIASGMGVAVLPESAARSLCGAVNGWMSRITTPSMSLSLSLNLPARANLSPQAQAVKELLMSVISSPVMEKRQWQLVS", - "protein_translation_length": 305, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945273" - ], - [ - "gene_synonym", - "yzzT" - ], - [ - "gene_synonym", - "NP_416494.1" - ], - [ - "gene_synonym", - "yeeG" - ], - [ - "gene_synonym", - "ECK1985" - ], - [ - "gene_synonym", - "b1990" - ], - [ - "gene_synonym", - "GI:16129931" - ], - [ - "gene_synonym", - "EcoGene:EG12682" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39176" - ], - [ - "gene_synonym", - "JW1968" - ], - [ - "gene_synonym", - "ldtA" - ], - [ - "gene_synonym", - "srfK" - ], - [ - "gene_synonym", - "ASAP:ABE-0006607" - ], - [ - "gene_synonym", - "erfK" - ] - ], - "dna_sequence": "ATGCGTCGTGTAAATATTCTTTGCTCATTTGCTCTGCTTTTTGCCAGCCATACTAGCCTGGCGGTAACTTATCCATTACCTCCAGAGGGTAGCCGTTTAGTGGGGCAGTCGTTTACTGTAACTGTTCCTGATCACAATACCCAGCCGCTGGAGACTTTTGCCGCACAATACGGGCAAGGGTTAAGTAACATGCTGGAAGCGAACCCGGGCGCTGATGTTTTTTTGCCGAAGTCTGGCTCGCAACTCACCATTCCGCAGCAACTGATTTTGCCCGACACTGTTCGTAAAGGGATTGTTGTTAACGTCGCTGAGATGCGTCTTTATTACTACCCACCAGACAGTAATACTGTGGAAGTCTTTCCTATTGGTATCGGCCAGGCTGGGCGAGAAACCCCGCGTAACTGGGTGACTACCGTTGAACGTAAACAAGAAGCTCCAACCTGGACGCCAACGCCGAACACTCGGCGCGAATATGCGAAACGAGGGGAGAGTTTGCCCGCATTTGTTCCTGCGGGCCCCGATAATCCCATGGGGCTGTACGCGATTTATATTGGCAGGTTGTATGCCATCCATGGTACCAATGCCAATTTTGGTATTGGGCTCCGGGTAAGTCAGGGCTGTATTCGTCTGCGCAATGACGATATCAAATATCTGTTTGATAATGTTCCTGTTGGGACGCGTGTGCAAATTATCGACCAGCCAGTAAAATACACCACTGAACCAGATGGCTCGAACTGGCTGGAAGTTCATGAGCCATTGTCGCGCAATCGTGCAGAATATGAGTCTGACCGAAAAGTGCCATTGCCGGTAACCCCATCTTTGCGGGCGTTTATCAACGGGCAAGAAGTTGATGTAAATCGCGCAAATGCTGCGTTGCAACGTCGATCGGGAATGCCTGTGCAAATTAGTTCTGGTTCAAGACAGATGTTTTAA", - "dna_sequence_length": 933, - "functions": [ - "L,D-transpeptidase linking Lpp to murein" - ], - "id": "CDS_1969", - "location": [ - [ - "NC_000913", - 2063323, - "-", - 933 - ] - ], - "md5": "e4332eda8ff8419705dd7cdfa0dbdcb4", - "parent_gene": "", - "protein_md5": "58dfc7bde3dbaccd9264edaa9f55b6d0", - "protein_translation": "MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF", - "protein_translation_length": 310, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cobT" - ], - [ - "gene_synonym", - "NP_416495.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006611" - ], - [ - "gene_synonym", - "ECK1986" - ], - [ - "gene_synonym", - "GI:16129932" - ], - [ - "gene_synonym", - "b1991" - ], - [ - "gene_synonym", - "EcoGene:EG12151" - ], - [ - "gene_synonym", - "JW1969" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36562" - ], - [ - "gene_synonym", - "GeneID:946517" - ] - ], - "dna_sequence": "ATGCAAATACTTGCCGATTTACTGAATACGATCCCAGCCATCGATTCTACCGCTATGTCGCGTGCACAACGGCATATTGACGGGTTACTCAAACCTGTTGGTAGCCTGGGAAAGCTGGAGGTGCTTGCCATACAACTGGCAGGAATGCCGGGGTTGAATGGCATACCGCATGTGGGCAAAAAAGCGGTACTGGTTATGTGTGCCGATCACGGCGTCTGGGAGGAAGGGGTCGCTATTTCTCCAAAAGAAGTGACAGCCATACAGGCTGAAAATATGACCCGTGGAACAACCGGCGTGTGTGTGCTGGCAGAACAAGCGGGCGCTAACGTCCACGTAATTGATGTTGGTATTGATACTGCTGAGCCTATCCCCGGGCTTATCAACATGCGTGTCGCACGAGGTAGCGGCAATATTGCTTCAGCTCCGGCAATGAGTCGCCGTCAGGCTGAAAAGTTGCTTTTGGACGTCATATGTTATACGCAGGAGCTGGCAAAAAACGGTGTCACGCTGTTTGGTGTAGGTGAACTGGGGATGGCAAACACGACACCGGCAGCAGCAATAGTCAGCACAATCACTGGCCGGGATCCTGAAGAAGTGGTTGGGATTGGCGCAAACCTGCCGACAGATAAACTGGCTAATAAAATTGATGTTGTGCGTCGGGCGATTACGTTGAATCAACCAAATCCTCAGGATGGTGTTGATGTCCTGGCAAAAGTGGGTGGATTTGATTTGGTCGGAATAGCTGGAGTGATGTTAGGTGCTGCTTCCTGCGGTTTACCCGTGTTGCTGGATGGATTTCTTTCTTATGCTGCTGCGCTCGCAGCCTGCCAGATGTCTCCTGCGATCAAACCGTATCTCATTCCTTCTCACCTGTCGGCAGAAAAAGGCGCGCGTATAGCGCTCTCGCATTTGGGGCTGGAGCCTTATCTCAATATGGAGATGCGTTTAGGTGAGGGGAGTGGCGCAGCTCTGGCGATGCCCATCATCGAAGCTGCCTGTGCGATATACAACAACATGGGCGAACTTGCTGCCAGTAATATTGTTCTACCGGGGAATACGACTTCTGATTTGAACAGTTAA", 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[ - "gene_synonym", - "GI:16129933" - ], - [ - "gene_synonym", - "GeneID:946520" - ], - [ - "gene_synonym", - "EcoGene:EG12150" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36561" - ], - [ - "gene_synonym", - "NP_416496.1" - ] - ], - "dna_sequence": "ATGAGTAAATTATTTTGGGCGATGCTCTCATTTATTACGCGTCTGCCTGTACCGCGTCGCTGGTCCCAGGGACTGGATTTCGAGCATTATTCTCGCGGTATTATTACTTTTCCTTTGATTGGATTATTGCTTGGCGCGATTAGCGGGCTGGTCTTCATGGTGCTGCAGGCATGGTGTGGCGCACCACTGGCGGCACTGTTTAGCGTACTTGTGCTGGTGCTGATGACCGGGGGATTCCATCTGGACGGCCTCGCTGATACCTGTGATGGCGTATTTTCTGCACGTAGCCGCGATCGCATGTTGGAAATCATGCGTGATAGCCGTTTAGGCACCCACGGCGGTCTGGCATTGATTTTTGTGGTACTGGCAAAGATTCTGGTGTTAAGCGAGTTGGCTCTGCGTGGCGAATCGATCCTTGCATCGCTGGCGGCAGCATGTGCGGTCAGCCGCGGGACTGCCGCATTATTGATGTATCGTCATCGTTATGCGCGGGAAGAAGGGCTTGGCAATGTGTTCATTGGCAAAATTGATGGGCGACAAACCTGCGTCACACTCGGCTTAGCCGCTATTTTTGCTGCCGTATTATTGCCGGGTATGCATGGTGTGGCTGCTATGGTGGTGACGATGGTGGCGATTTTCATCCTCGGTCAGCTTCTCAAACGTACGCTGGGCGGGCAAACGGGCGATACGCTGGGAGCAGCCATAGAGCTTGGTGAACTGGTCTTCCTGCTGGCACTGCTATAA", - "dna_sequence_length": 744, - "functions": [ - "cobalamin synthase" - ], - "id": "CDS_1971", - "location": [ - [ - "NC_000913", - 2065222, - "-", - 744 - ] - ], - "md5": "2548545cfaf4a000ed5f98b3d956b62d", - "parent_gene": "", - "protein_md5": "907ef3d36cec2b858bb4d54e5b86bc80", - "protein_translation": "MSKLFWAMLSFITRLPVPRRWSQGLDFEHYSRGIITFPLIGLLLGAISGLVFMVLQAWCGAPLAALFSVLVLVLMTGGFHLDGLADTCDGVFSARSRDRMLEIMRDSRLGTHGGLALIFVVLAKILVLSELALRGESILASLAAACAVSRGTAALLMYRHRYAREEGLGNVFIGKIDGRQTCVTLGLAAIFAAVLLPGMHGVAAMVVTMVAIFILGQLLKRTLGGQTGDTLGAAIELGELVFLLALL", - "protein_translation_length": 247, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cobU" - ], - [ - "gene_synonym", - "ECK1988" - ], - [ - "gene_synonym", - "GeneID:946519" - ], - [ - "gene_synonym", - "b1993" - ], - [ - "gene_synonym", - "ASAP:ABE-0006616" - ], - [ - "gene_synonym", - "EcoGene:EG13238" - ], - [ - "gene_synonym", - "JW1971" - ], - [ - "gene_synonym", - "NP_416497.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE76" - ], - [ - "gene_synonym", - "GI:16129934" - ] - ], - "dna_sequence": "ATGATGATTTTGGTGACGGGGGGCGCACGGAGCGGGAAGAGTCGCCACGCAGAGGCGCTTATTGGGGACTCTTCACAGGTTCTGTATATCGCTACCTCGCAAATCCTTGATGATGAGATGGCTGCACGGATAGAACATCATCGGCAAGGCCGCCCGGAGCACTGGCGCACAGTGGAGCGCTGGCAACATCTTGATGAATTAATTCATGCAGACATTAACCCGAATGAGGTTGTGTTGCTTGAATGCGTTACCACAATGGTGACTAATCTGTTGTTTGATTATGGCGGCGATAAAGACCCTGATGAATGGGATTATCAGGCGATGGAACAGGCGATTAATGCTGAGATTCAGTCGTTGATTGCTGCCTGCCAACGTTGCCCCGCAAAGGTTGTATTAGTGACTAACGAAGTGGGAATGGGGATTGTGCCGGAGAGTCGTCTGGCACGACATTTTCGTGATATTGCCGGGCGGGTAAATCAGCAGTTGGCCGCTGCGGCAAATGAAGTATGGCTGGTGGTTTCGGGTATTGGAGTAAAAATCAAATGA", - "dna_sequence_length": 546, - "functions": [ - "cobinamide kinase and cobinamide phosphate guanylyltransferase" - ], - "id": "CDS_1972", - "location": [ - [ - "NC_000913", - 2065764, - "-", - 546 - ] - ], - "md5": "e8146f4a058501dec7b583aa8c040a22", - "parent_gene": "", - "protein_md5": "5d88ea27e95c24e146db18b083197392", - "protein_translation": "MMILVTGGARSGKSRHAEALIGDSSQVLYIATSQILDDEMAARIEHHRQGRPEHWRTVERWQHLDELIHADINPNEVVLLECVTTMVTNLLFDYGGDKDPDEWDYQAMEQAINAEIQSLIAACQRCPAKVVLVTNEVGMGIVPESRLARHFRDIAGRVNQQLAAAANEVWLVVSGIGVKIK", - "protein_translation_length": 181, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:5625565" - ], - [ - "gene_synonym", - "yeeH" - ], - [ - "gene_synonym", - "ECK4437" - ], - [ - "gene_synonym", - "b4639" - ], - [ - "gene_synonym", - "EcoGene:EG13239" - ] - ], - "dna_sequence": "TGCATAGTCGCCACCATTCCGGATAATTCTATTACGTTGTTTTACAAGTTCTTTTACAGCGCAGATCTGTCGCTGACGTTGAATCAA", - "dna_sequence_length": 87, - "id": "CDS_1973", - "location": [ - [ - "NC_000913", - 2066154, - "-", - 87 - ] - ], - "md5": "8d768d364009d727eb298f13fbb83cd9", - "parent_gene": "", - "protein_md5": "bd8388b092af39e964dce4b2f9925908", - "protein_translation": "CIVATIPDNSITLFYKFFYSADLSLTLNQ", - "protein_translation_length": 29, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006619" - ], - [ - "gene_synonym", - "EcoGene:EG40008" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CE53" - ], - [ - "gene_synonym", - "insH1" - ], - [ - "gene_synonym", - "NP_416498.1" - ], - [ - "gene_synonym", - "b1994" - ], - [ - "gene_synonym", - "GI:16129935" - ], - [ - "gene_synonym", - "GeneID:946507" - ], - [ - "gene_synonym", - "ECK0261" - ] - ], - "dna_sequence": "ATGTTTGTCATCTGGAGCCATGGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGCGGCCTGACCCACAGCCTAGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAAGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", 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"ATGGTTATTTAACTTCTCAGCACCACTAATGATCCTGAGCAACTTCGTATTTGGGCCATTACCATGGAGTAGAAAGCTGTGTCTGAGAATGCAGAATTTGAGAAAAGAATTCGCTTTCTTGGAGAGCTTCTGAAAATGGCACGCTAACAACGTTTTGTTAAAAAATGTGAATCACTTGCCGGGGCTGCATTTTCTATTCGAGGAGAATGTTGACGTAGATATTACAGAAATCTCAGCGCATCAGGATAAACTGCTACCTTAGGTCAACCACCAAAAGAAAATACAATACGTCCAGTTTGTATGCCTTTAATAACACATCTTCTAAATGTTGAAGAATTATCCCGCCTGCTGAAGAACGTTGCTCTGAGTGTGATAAACCTTTTTATTCTTGATGATGTCAGCGAGAAGATGGAATATATCCCCGACTGGGTCGTGGGTTACCCGGTTAAACATCTGGTGGCGCTAATAAATCTGGCAAGTCACATTCTGTTGAATGCTGTGACAGTGCCTTACCGAGAGAGCGAAATTGTGGTG", - "dna_sequence_length": 534, - "id": "CDS_1975", - "location": [ - [ - "NC_000913", - 2067892, - "-", - 435 - ], - [ - "NC_000913", - 2067458, - "-", - 99 - ] - ], - "md5": "f32a5f62436e2cdf555effcede289738", - "parent_gene": "", - "protein_md5": "2b0474c946f07c041730926b3f88f9b8", - "protein_translation": "MVI", - "protein_translation_length": 3, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4641" - ], - [ - "gene_synonym", - "GeneID:5625567" - ], - [ - "gene_synonym", - "ECK4452" - ], - [ - "gene_synonym", - "EcoGene:EG14441" - ], - [ - "gene_synonym", - "yoeH" - ] - ], - "dna_sequence": "GCACTCTTGACATAAGAGTGCGGTCCGTGGAAAACGGAGTTGAAAAAATGGTGTCTGAAAGAAGGTACCATCATTGTGATGACAAATACTTTGGCGTGGATAATGTAATTAATTGCTGAAATTGACCGTATATGCGGTAAGACTCATATCAGTATCAGG", - "dna_sequence_length": 159, - "id": "CDS_1976", - "location": [ - [ - "NC_000913", - 2068419, - "-", - 159 - ] - ], - "md5": "6f4f3ea24a5ffeecf410c662ff01955a", - "parent_gene": "", - "protein_md5": "4c616cdff6f8a8e58b6aa3e4c2f14eff", - "protein_translation": "ALLT", - "protein_translation_length": 4, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1989" - ], - [ - "gene_synonym", - "b4582" - ], - [ - "gene_synonym", - "ASAP:ABE-0006626" - ], - [ - "gene_synonym", - "EcoGene:EG14308" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76356" - ], - [ - "gene_synonym", - "GeneID:4056042" - ], - [ - "gene_synonym", - "ASAP:ABE-0006636" - ], - 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"MLYNIPCRIYILSTLSLCISGIVSTATATSSETKISNEETLVVTTNRSASNLWESPATIQVIDQQTLQNSTNASIADNLQDIPGVEITDNSLAGRKQIRIRGEASSRVLILIDGQEVTYQRAGDNYGVGLLIDESALERVEVVKGPYSVLYGSQAIGGIVNFITKKGE", - "protein_translation_length": 168, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF55" - ], - [ - "gene_synonym", - "GeneID:946403" - ], - [ - "gene_synonym", - "ASAP:ABE-0006629" - ], - [ - "gene_synonym", - "EcoGene:EG40004" - ], - [ - "gene_synonym", - "insD1" - ], - [ - "gene_synonym", - "ECK0358" - ], - [ - "gene_synonym", - "GI:16129937" - ], - [ - "gene_synonym", - "b1996" - ], - [ - "gene_synonym", - "NP_416500.1" - ] - ], - "dna_sequence": "GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG", - "dna_sequence_length": 906, - "functions": [ - "IS2 transposase TnpB" - ], - "id": "CDS_1978", - "location": [ - [ - "NC_000913", - 2069857, - "-", - 906 - ] - ], - "md5": "d7a869f3d04f69c9bbc5e3da4131ca74", - "parent_gene": "", - "protein_md5": "e9d0a5629c6cb4141f55451e6130cec7", - "protein_translation": "MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI", - "protein_translation_length": 301, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "insC1" - ], - [ - "gene_synonym", - "YP_026163.2" - ], - [ - "gene_synonym", - "GeneID:946455" - ], - [ - "gene_synonym", - "EcoGene:EG40003" - ], - [ - "gene_synonym", - "ASAP:ABE-0006631" - ], - [ - "gene_synonym", - "b1997" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF42" - ], - [ - "gene_synonym", - "ECK0357" - ], - [ - "gene_synonym", - "GI:145698282" - ] - ], - "dna_sequence": "ATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAA", - "dna_sequence_length": 366, - "functions": [ - "IS2 repressor TnpA" - ], - "id": "CDS_1979", - "location": [ - [ - "NC_000913", - 2070180, - "-", - 366 - ] - ], - "md5": "9ed51bec276857ffa1620cbb329c920f", - "parent_gene": "", - "protein_md5": "2766fdd4e9e285df2a70f8c10f901f65", - "protein_translation": "MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76359" - ], - [ - "gene_synonym", - "GeneID:946524" - ], - [ - "gene_synonym", - "EcoGene:EG13384" - ], - [ - "gene_synonym", - "ECK1991" - ], - [ - "gene_synonym", - "ASAP:ABE-0006639" - ], - [ - "gene_synonym", - "yeeP" - ], - [ - "gene_synonym", - "JW5327" - ], - [ - "gene_synonym", - "b1999" - ] - ], - "dna_sequence": "TACCGTGACATTCTGCCTGAACTTGACCTGGTACTGTGGCTGATTAAAGCCGATGACCGTGCCCTGTCTGTGGATGAGTATTTCTGGCGACACATCCTGCAGTGCGGACATCAGCAGGTGCTGTTTGTGGTGACGCAGGCCGACAAAACGGAGCCCTGCCATGAATGGGATATGGCCGGTATTCAGCCTTCTCCTGCACAGGCACAGAATATTCGCGAAAAAACGGAGGCGGTATTCCGTCTGTTCCGGCCCGTACATCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGTGCGGTATGGAACTGGATTTTCTTCTGA", - "dna_sequence_length": 552, - "id": "CDS_1980", - "location": [ - [ - "NC_000913", - 2070660, - "+", - 552 - ] - ], - "md5": "721307c7febafbfcec59cd025a3967a1", - "parent_gene": "", - "protein_md5": "09aa1656f79f1ec645c9db49b68941a6", - "protein_translation": "YRDILPELDLVLWLIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRSQAREQFTGAVDRIFDTAESVCIASVARTVLRAVRDTVVSVARAVWNWIFF", - "protein_translation_length": 183, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "agn43" - ], - [ - "gene_synonym", - "agn" - ], - [ - "gene_synonym", - "yzzX" - ], - [ - "gene_synonym", - "b2000" - ], - [ - "gene_synonym", - "EcoGene:EG12686" - ], - [ - "gene_synonym", - "GeneID:946540" - ], - [ - "gene_synonym", - "flu" - ], - [ - "gene_synonym", - "ECK1993" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39180" - ], - [ - "gene_synonym", - "JW1982" - ], - [ - "gene_synonym", - "YP_026164.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006642" - ], - [ - "gene_synonym", - "GI:49176177" - ], - [ - "gene_synonym", - "yeeQ" - ] - ], - "dna_sequence": "ATGAAACGACATCTGAATACCTGCTACAGGCTGGTATGGAATCACATGACGGGCGCTTTCGTGGTTGCCTCCGAACTGGCCCGCGCACGGGGTAAACGTGGCGGTGTGGCGGTTGCACTGTCTCTTGCCGCAGTCACGTCACTCCCGGTGCTGGCTGCTGACATCGTTGTGCACCCGGGAGAAACCGTGAACGGCGGAACACTGGCAAATCATGACAACCAGATTGTCTTCGGTACGACCAACGGAATGACCATCAGTACCGGGCTGGAGTATGGGCCGGATAACGAGGCCAATACCGGCGGGCAATGGGTACAGGATGGCGGAACAGCCAACAAAACGACTGTCACCAGTGGTGGTCTTCAGAGAGTGAACCCCGGTGGAAGTGTCTCAGACACGGTTATCAGTGCCGGAGGCGGACAGAGCCTTCAGGGACGGGCTGTGAACACCACGCTGAATGGTGGCGAACAGTGGATGCATGAGGGGGCGATAGCCACAGGAACCGTCATTAATGATAAGGGCTGGCAGGTCGTCAAGCCCGGTACAGTGGCAACGGATACCGTTGTTAATACCGGGGCGGAAGGGGGACCGGATGCAGAAAACGGTGATACCGGGCAGTTTGTTCGCGGGGATGCCGTACGCACAACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGTTTATGCCGGCGGCGACCAGACTGTACATGGTCACGCACTGGATACCACGCTGAATGGGGGATACCAGTATGTGCACAACGGCGGTACAGCGTCTGACACTGTTGTGAACAGTGACGGCTGGCAGATTGTCAAAAACGGGGGTGTGGCCGGGAATACCACCGTTAATCAGAAGGGCAGACTGCAGGTGGACGCCGGTGGTACAGCCACGAATGTCACCCTGAAGCAGGGCGGCGCACTGGTTACCAGTACGGCTGCAACCGTTACCGGCATAAACCGCCTGGGAGCATTCTCTGTTGTGGAGGGTAAAGCTGATAATGTCGTACTGGAAAATGGCGGACGCCTGGATGTGCTGACCGGACACACAGCCACTAATACCCGCGTGGATGATGGCGGAACGCTGGATGTCCGCAACGGTGGCACCGCCACCACCGTATCCATGGGAAATGGCGGTGTACTGCTGGCCGATTCCGGTGCCGCTGTCAGTGGTACCCGGAGCGACGGAAAGGCATTCAGTATCGGAGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCGGTGATACGGCCACGGATACCACGGTAAATGGCGGACTGTTCACCGCCAGGGGCGGCACACTGGCGGGCACCACCACGCTGAATAACGGCGCCATACTTACCCTTTCCGGGAAGACGGTGAACAACGATACCCTGACCATCCGTGAAGGCGATGCACTCCTGCAGGGAGGCTCTCTCACCGGTAACGGCAGCGTGGAAAAATCAGGAAGTGGCACACTCACTGTCAGCAACACCACACTCACCCAGAAAGCCGTCAACCTGAATGAAGGCACGCTGACGCTGAACGACAGTACCGTCACCACGGATGTCATTGCTCAGCGCGGTACAGCCCTGAAGCTGACCGGCAGCACTGTGCTGAACGGTGCCATTGACCCCACGAATGTCACTCTCGCCTCCGGTGCCACCTGGAATATCCCCGATAACGCCACGGTGCAGTCGGTGGTGGATGACCTCAGCCATGCCGGACAGATTCATTTCACCTCCACCCGCACAGGGAAGTTCGTACCGGCAACCCTGAAAGTGAAAAACCTGAACGGACAGAATGGCACCATCAGCCTGCGTGTACGCCCGGATATGGCACAGAACAATGCTGACAGACTGGTCATTGACGGCGGCAGGGCAACCGGAAAAACCATCCTGAACCTGGTGAACGCCGGCAACAGTGCGTCGGGGCTGGCGACCAGCGGTAAGGGTATTCAGGTGGTGGAAGCCATTAACGGTGCCACCACGGAGGAAGGGGCCTTTGTCCAGGGGAACAGGCTGCAGGCCGGTGCCTTTAACTACTCCCTCAACCGGGACAGTGATGAGAGCTGGTATCTGCGCAGTGAAAATGCTTATCGTGCAGAAGTCCCCCTGTATGCCTCCATGCTGACACAGGCAATGGACTATGACCGGATTGTGGCAGGCTCCCGCAGCCATCAGACCGGTGTAAATGGTGAAAACAACAGCGTCCGTCTCAGCATTCAGGGCGGTCATCTCGGTCACGATAACAATGGCGGTATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGATTCGTCCGTCTGGAGGGTGACCTGATGAGAACAGAGGTTGCCGGTATGTCTGTGACCGCGGGGGTATATGGTGCTGCTGGCCATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGTGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGGTACACACGTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCGTCATCGGACAATAACGACTTCCGCGCCCGGGGCTGGGGCTGGCTGGGCTCACTGGAAACCGGTCTGCCCTTCAGTATCACTGACAACCTGATGCTGGAGCCACAACTGCAGTATACCTGGCAGGGACTTTCCCTGGATGACGGTAAGGACAACGCCGGTTATGTGAAGTTCGGGCATGGCAGTGCACAACATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGCGAAGGCACCTCATCCCGTGCCCCCCTGCGTGACAGTGCAAAACACAGTGTGAGTGAATTACCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACCTTCAGCTCCCGGGGAGATATGCGTGTGGGGACTTCCACTGCAGGCAGCGGGATGACGTTCTCTCCCTCACAGAATGGCACATCACTGGACCTGCAGGCCGGACTGGAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAGGGTATAACGGTCAGGCCACACTGAATGTGACCTTCTGA", 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"MKRHLNTCYRLVWNHMTGAFVVASELARARGKRGGVAVALSLAAVTSLPVLAADIVVHPGETVNGGTLANHDNQIVFGTTNGMTISTGLEYGPDNEANTGGQWVQDGGTANKTTVTSGGLQRVNPGGSVSDTVISAGGGQSLQGRAVNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPGTVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINKNGRQIVRAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQVVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRIVAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLMRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQPSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLDLQAGLEARVRENITLGVQAGYAHSVSGSSAEGYNGQATLNVTF", - "protein_translation_length": 1039, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946512" - ], - [ - "gene_synonym", - "b2001" - ], - [ - "gene_synonym", - "ECK1994" - ], - [ - "gene_synonym", - "EcoGene:EG13385" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76361" - ], - [ - "gene_synonym", - "JW1983" - ], - [ - "gene_synonym", - "GI:90111368" - ], - [ - "gene_synonym", - "yeeR" - ], - [ - "gene_synonym", - "ASAP:ABE-0006648" - ], - [ - "gene_synonym", - "NP_416505.2" - ] - ], - "dna_sequence": "ATGTTACAGATAGTCGGCGCGCTGATCCTGCTGATCGCAGGATTTGCCATTCTTCGCCTTTTGTTCAGAGCATTAATCAGCACGGCTTCTGCGCTGGCAGGGCTCATATTGCTGTGTCTGTTCGGCCCGGCCTTACTGGCTGGCTATATCACCGAACGCATAACCCGGTTGTTCCATATTCGCTGGCTGGCAGGCGTATTTCTGACGATTGCCGGAATGATCATCAGCTTCATGTGGGGACTTGATGGTAAACATATCGCGCTGGAGGCTCACACCTTTGACTCTGTGAAATTTATTCTGACCACCGCTCTCGCCGGTGGTCTGCTGGCTGTTCCCCTGCAGATCAAAAACATTCAGCAGAACGGGATCACACCAGAAGATATCAGCAAGGAAATTAACGGGTATTACTGCTGTTTTTATACTGCCTTTTTCCTTATGGCGTGTTCTGCATGCGCACCATTGATCGCGTTACAGTACGATATTTCACCGTCACTGATGTGGTGGGGCGGGTTGTTGTACTGGCTGGCTGCATTAGTGACGCTGCTATGGGCGGCCAGCCAGATCCAGGCGCTGAAAAAACTGACCTGTGCCATCAGCCAGACACTGGAAGAACAACCGGTGCTCAACAGTAAATCGTGGCTGACCAGTTTGCAAAACGATTACAGCCTTCCTGACTCACTGACGGAGCGCATCTGGCTGACGCTCATTTCTCAACGGATTTCCCGGGGAGAGCTGAGGGAATTTGAACTGGCAGACGGAAACTGGTTACTGAACAATGCCTGGTATGAAAGAAACATGGCAGGGTTTAACGAACAGTTGAAAGAGAACCTGTCATTCACACCTGATGAACTGAAAACGCTCTTCCGGAACCGCCTGAATTTATCACCGGAAGCGAATGACGATTTTCTCGATCGTTGCCTGGACGGCGGTGACTGGTATCCCTTTTCAGAAGGTCGCCGTTTTGTATCATTCCATCACGTGGATGAGCTTCGTATCTGTGCCTCCTGCGGGCTGACAGAAGTACATCATGCCCCGGAAAATCATAAGCCGGATCCGGAATGGTACTGCTCCTCTCTTTGTCGCGAAACAGAAACACTGTGTCAGGAAATTTATGAACGCCCTTACAACAGCTTTATTTCCGATGCAACGGCGAATGGTCTGATTCTCATGAAACTGCCGGAAACCTGGAGTACAAATGAGAAAATGTTTGCTTCCGGAGGGCAGGGACATGGGTTTGCCGCTGAACGGGGAAACCATATTGTCGACAGAGTCCGTCTGAAAAACGCACGGATCCTCGGTGATAATAATGCCAGAAATGGAGCAGACAGACTGGTCAGCGGAACAGAAATCCAGACGAAATATTGTTCAACTGCAGCCCGTAGCGTCGGTGCGGCATTCGACGGACAAAACGGACAGTATCGTTACATGGGAAATAATGGCCCCATGCAACTGGAAGTCCCCCGTGATCAGTATGCCGGCGCTGTTGAAACCATGAGGAATAAGATCCGCGAAGGTAAAGTAGAGGAGAGATGA", 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"NP_416506.1" - ], - [ - "gene_synonym", - "b2002" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76362" - ], - [ - "gene_synonym", - "EcoGene:EG13386" - ], - [ - "gene_synonym", - "GI:16129943" - ], - [ - "gene_synonym", - "JW1984" - ], - [ - "gene_synonym", - "ASAP:ABE-0006650" - ], - [ - "gene_synonym", - "yeeS" - ], - [ - "gene_synonym", - "GeneID:946514" - ] - ], - "dna_sequence": "ATGACGCCCGGCGAGCGCAGCCTCATTCAACGGGCCCTGAAAACCCTGGACCGCCATCTTCATGAACCCGGCGTGGCCTTCACCTCCACCCGTGCAGCACGGGAATGGCTGATTCTGAACATGGCGGGACTGGAGCGTGAAGAATTCCGGGTGCTGTATCTGAACAACCAGAATCAGCTGATTGCCGGTGAAACCCTCTTCACCGGCACCATCAACCGCACGGAAGTCCATCCCCGGGAAGTGATTAAACGCGCCCTGTACCACAATGCCGCTGCCGTGGTACTGGCACACAATCACCCGTCCGGTGAAGTCACACCCAGTAAGGCAGACCGGCTTATCACCGAACGTCTGGTACAGGCACTGGGCCTGGTGGATATCCGGGTGCCGGACCATCTGATAGTCGGTGGCAACCAGGTTTTCTCCTTTGCCGAACATGGTCTGCTTTAA", - "dna_sequence_length": 447, - "functions": [ - "CP4-44 prophage", - "putative DNA repair protein" - ], - "id": "CDS_1983", - "location": [ - [ - "NC_000913", - 2076308, - "+", - 447 - ] - ], - "md5": "18a5de9fdd4349f66f2a8a8ef099423c", - "parent_gene": "", - "protein_md5": "b0f5767d4c4d520aabe057e6e586c3d9", - "protein_translation": "MTPGERSLIQRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL", - "protein_translation_length": 148, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64521" - ], - [ - "gene_synonym", - "EcoGene:EG13387" - ], - [ - "gene_synonym", - "b2003" - ], - [ - "gene_synonym", - "ECK1996" - ], - [ - "gene_synonym", - "NP_416507.1" - ], - [ - "gene_synonym", - "GI:16129944" - ], - [ - "gene_synonym", - "JW1985" - ], - [ - "gene_synonym", - "ASAP:ABE-0006653" - ], - [ - "gene_synonym", - "GeneID:946513" - ], - [ - "gene_synonym", - "yeeT" - ] - ], - "dna_sequence": "ATGAAAATTATCACCCGTGGTGAAGCCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTGGCACGGCAGTGCTGAAGCGTATACCGGTCGTGAAGTGCAGGATATTCCCGGTGTGCTGGCCGTGTTTGCTGAACGCCGTAAGGACAGTTTTGGTCCGTATGTCCGGCTGATGAGCGTCACCCTGAACTGA", - "dna_sequence_length": 222, - "functions": [ - "CP4-44 prophage", - "uncharacterized protein" - ], - "id": "CDS_1984", - "location": [ - [ - "NC_000913", - 2076817, - "+", - 222 - ] - ], - "md5": "8f5c454c41bb5dacba5aa513901b025a", - "parent_gene": "", - "protein_md5": "a6f488e8d5e1788f9d33cbdccdd2e982", - "protein_translation": "MKIITRGEAMRIHQQHPTSRLFPFCTGKYRWHGSAEAYTGREVQDIPGVLAVFAERRKDSFGPYVRLMSVTLN", - "protein_translation_length": 73, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13388" - ], - [ - "gene_synonym", - "NP_416508.1" - ], - [ - "gene_synonym", - "cbeA" - ], - [ - "gene_synonym", - "ECK1997" - ], - [ - "gene_synonym", - "b2004" - ], - [ - "gene_synonym", - "ASAP:ABE-0006656" - ], - [ - "gene_synonym", - "GI:16129945" - ], - [ - "gene_synonym", - "JW1986" - ], - [ - "gene_synonym", - "GeneID:946510" - ], - [ - "gene_synonym", - "yeeU" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76364" - ] - ], - "dna_sequence": "GTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGGCCTGTTCAGCGATGCAGATGCGTACCACCTGGACCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGTGAACTGAATCCCCGCCATCAGCATACCGTCACGCTGTATGCAAAAGGGCTGACCTGCAAAGCCGATACCCTCAGCAGTTGTGATTACGTTTATCTGGCTGTTTATCCGACGCCCGAAATGAAAAATTAA", - "dna_sequence_length": 369, - "functions": [ - "CP4-44 prophage", - "cytoskeleton bundling-enhancing factor A", - "CbtA antitoxin" - ], - "id": "CDS_1985", - "location": [ - [ - "NC_000913", - 2077112, - "+", - 369 - ] - ], - "md5": "589743f6116b5f2a462109931c5df2ee", - "parent_gene": "", - "protein_md5": "90387280ed8cabcf426eb201135cb812", - "protein_translation": "MSDTLPGTTLPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGLFSDADAYHLDQAFPLLMKQLELMLTSGELNPRHQHTVTLYAKGLTCKADTLSSCDYVYLAVYPTPEMKN", - "protein_translation_length": 122, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64524" - ], - [ - "gene_synonym", - "ECK1998" - ], - [ - "gene_synonym", - "GeneID:946534" - ], - [ - "gene_synonym", - "EcoGene:EG13389" - ], - [ - "gene_synonym", - "b2005" - ], - [ - "gene_synonym", - "GI:16129946" - ], - [ - "gene_synonym", - "JW1987" - ], - [ - "gene_synonym", - "NP_416509.1" - ], - [ - "gene_synonym", - "cbtA" - ], - [ - "gene_synonym", - "ASAP:ABE-0006659" - ], - [ - "gene_synonym", - "yeeV" - ] - ], - "dna_sequence": "ATGAAAACATTACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTCCCGACTGCTGGACCAGCACTATGGCCTCACACTGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTGAGGCAGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGAAAAATACGCGCTGGTGCGTACCGACCAGCCGGGATTCAGCGCCTGTACCCGCTCTCAGTTAATAAACAGCATCGATATCCTCCGGGCTCGCAGGGCGACCGGCCTGATGACCCGCGACAATTACAGAACGGTAAATAACATTACCCTGGGTAAGTATCCGGAGGCGAAATGA", - "dna_sequence_length": 375, - "functions": [ - "CP4-44 prophage", - "toxin of the YeeV-YeeU toxin-antitoxin system" - ], - "id": "CDS_1986", - "location": [ - [ - "NC_000913", - 2077569, - "+", - 375 - ] - ], - "md5": "e459d8928f21f1d02d217e7741e0036c", - "parent_gene": "", - "protein_md5": "d29e3bb2a82d79bec326de51a6fca17d", - "protein_translation": "MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGFSACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKYPEAK", - "protein_translation_length": 124, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK1999" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64526" - ], - [ - "gene_synonym", - "GeneID:946535" - ], - [ - "gene_synonym", - "b2006" - ], - [ - "gene_synonym", - "EcoGene:EG13390" - ], - [ - "gene_synonym", - "JW1988" - ], - [ - "gene_synonym", - "ASAP:ABE-0006661" - ], - [ - "gene_synonym", - "yeeW" - ] - ], - "dna_sequence": "ATGATGACACTGGAAGCCGACAGCGTTAACGTACAGGCGCTGGATATGGGGCACATTGTCGTTGACATTGATGGTGTTAATATCACTGAACTGATTAATAAGGCCGCTGAAAACGGTTATTCACTCCGCGTGGTGGATGACCGTGACTCTACCGAAACACCGGCAACT", - "dna_sequence_length": 168, - "id": "CDS_1987", - "location": [ - [ - "NC_000913", - 2077940, - "+", - 168 - ] - ], - "md5": "ae63c3d575885de7b970a8eb11ac694f", - "parent_gene": "", - "protein_md5": "8a5b6a16f0bad15ba95e8ee37ad3ced8", - "protein_translation": "MMTLEADSVNVQALDMGHIVVDIDGVNITELINKAAENGYSLRVVDDRDSTETPAT", - "protein_translation_length": 56, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:5625568" - ], - [ - "gene_synonym", - "yoeD" - ], - [ - "gene_synonym", - "b4642" - ], - [ - "gene_synonym", - "EcoGene:EG14362" - ], - [ - "gene_synonym", - "ECK4443" - ] - ], - "dna_sequence": "GGCACCTGCCGTCTGAACGGTATCGATCCGGAAGCGTATCTGCGCCATATTCTGAGCATACTGCCGGAATGGCCCTCCAACCGTGTTGACGAACTCCTGCCATGGAACGTAGTTCTCACCAATAAATAA", - "dna_sequence_length": 129, - "id": "CDS_1988", - "location": [ - [ - "NC_000913", - 2078677, - "-", - 129 - ] - ], - "md5": "974030ee1107a39f60c6a8887e5d80c1", - "parent_gene": "", - "protein_md5": "e5106e9fbbf92d52bbd5cabcaf8ab758", - "protein_translation": "GTCRLNGIDPEAYLRHILSILPEWPSNRVDELLPWNVVLTNK", - "protein_translation_length": 42, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q2EES3" - ], - [ - "gene_synonym", - "ASAP:ABE-0285059" - ], - [ - "gene_synonym", - "GeneID:1450273" - ], - [ - "gene_synonym", - "ECK2000" - ], - [ - "gene_synonym", - "b4538" - ], - [ - "gene_synonym", - "JW5328" - ], - [ - "gene_synonym", - "yoeF" - ], - [ - "gene_synonym", - "EcoGene:EG14425" - ] - ], - "dna_sequence": "GCCATGAATCACCCGGTCATTGGAGTAGTAACCAAAGCAGATTTAGCCAGCATGGAACAAATATCTTTGGTGAAAAGTTGGTTACGGGAAGCTGGAGCGCACAACGTGTTAGTAACCAGTGCAGTTAATAACAATGGAGTTACAGAACTTTTTGCCTTGCTGCATACAGAAGAAGGCTGTTGTTAA", - "dna_sequence_length": 186, - "id": "CDS_1989", - "location": [ - [ - "NC_000913", - 2078746, - "+", - 186 - ] - ], - "md5": "e4761f4dc6f8c7094f7840d23453c689", - "parent_gene": "", - "protein_md5": "5494bb3d68fe043aaae9f66b5cd34afb", - "protein_translation": "AMNHPVIGVVTKADLASMEQISLVKSWLREAGAHNVLVTSAVNNNGVTELFALLHTEEGCC", - "protein_translation_length": 61, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416511.4" - ], - [ - "gene_synonym", - "GeneID:946541" - ], - [ - "gene_synonym", - "b2007" - ], - [ - "gene_synonym", - "EcoGene:EG13391" - ], - [ - "gene_synonym", - "yeeX" - ], - [ - "gene_synonym", - "ECK2001" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8M6" - ], - [ - "gene_synonym", - "JW1989" - ], - [ - "gene_synonym", - "ASAP:ABE-0006663" - ], - [ - "gene_synonym", - "GI:145698283" - ] - ], - "dna_sequence": "ATGGAAACTACCAAGCCTTCATTCCAGGACGTACTGGAATTTGTTCGTCTGTTCCGTCGTAAGAACAAACTGCAACGTGAAATTCAGGACGTTGAGAAAAAGATCCGTGACAACCAGAAGCGCGTCCTGCTGCTGGACAACCTGAGCGATTACATCAAGCCGGGGATGAGCGTTGAAGCAATCCAGGGCATCATCGCCAGCATGAAAGGTGACTATGAAGATCGCGTTGACGATTACATCATCAAAAATGCCGAGCTCTCCAAAGAACGCCGCGATATCTCCAAAAAGCTGAAAGCTATGGGCGAAATGAAAAACGGCGAAGCGAAGTAA", - "dna_sequence_length": 330, - "functions": [ - "UPF0265 family protein" - ], - "id": "CDS_1990", - "location": [ - [ - "NC_000913", - 2079361, - "-", - 330 - ] - ], - "md5": "c20f3ad90cc4551ee2c42de9cc8a1b8f", - "parent_gene": "", - "protein_md5": "cde4763fcefe996b6c1cff110f9aa96b", - "protein_translation": "METTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLLLDNLSDYIKPGMSVEAIQGIIASMKGDYEDRVDDYIIKNAELSKERRDISKKLKAMGEMKNGEAK", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2008" - ], - [ - "gene_synonym", - "yeeA" - ], - [ - "gene_synonym", - "NP_416512.1" - ], - [ - "gene_synonym", - "GeneID:946545" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33011" - ], - [ - "gene_synonym", - "ECK2002" - ], - [ - "gene_synonym", - "EcoGene:EG11891" - ], - [ - "gene_synonym", - "JW1990" - ], - [ - "gene_synonym", - "ASAP:ABE-0006667" - ], - [ - "gene_synonym", - "GI:16129949" - ] - ], - "dna_sequence": "GTGCGTGCCGATAAGTCATTAAGCCCGTTTGAAATCCGGGTATACCGCCATTACCGCATTGTGCATGGTACTCGGGTCGCGCTGGCATTCCTGCTCACTTTTCTCATTATCCGCCTGTTTACTATCCCGGAAAGCACCTGGCCGCTGGTCACCATGGTGGTGATTATGGGGCCAATCTCGTTCTGGGGTAACGTTGTCCCTCGCGCCTTTGAGCGTATTGGCGGTACGGTGTTGGGTTCGATTTTAGGTCTTATCGCTCTGCAACTGGAGTTAATCTCGTTACCGCTGATGTTAGTCTGGTGCGCGGCGGCCATGTTCCTTTGCGGTTGGCTGGCGCTGGGCAAGAAACCGTATCAAGGTTTATTGATTGGGGTGACGCTGGCAATTGTTGTGGGTTCCCCGACAGGTGAAATTGATACGGCGTTATGGCGAAGCGGCGATGTGATCCTCGGCTCTTTACTGGCAATGTTGTTTACCGGTATCTGGCCACAACGGGCGTTCATCCACTGGCGCATTCAACTGGCGAAAAGTCTGACCGAGTATAATCGGGTCTATCAATCTGCATTCTCACCGAACTTACTCGAACGCCCACGTCTGGAAAGCCATCTACAAAAACTCCTGACCGATGCCGTGAAAATGCGTGGACTGATTGCGCCCGCCAGCAAAGAAACCCGTATTCCAAAATCGATATATGAAGGTATCCAGACCATTAACCGCAATCTGGTTTGTATGCTGGAGTTGCAAATCAATGCATACTGGGCCACGCGCCCCAGCCATTTCGTGTTATTGAACGCGCAAAAACTTCGTGATACCCAGCACATGATGCAGCAAATACTGCTGAGCCTTGTTCATGCGCTGTACGAAGGTAATCCGCAGCCGGTTTTTGCCAATACGGAAAAATTGAACGATGCTGTGGAAGAGCTGCGTCAGTTGCTCAATAACCACCATGACCTGAAGGTTGTGGAAACACCAATCTATGGTTATGTGTGGCTGAACATGGAAACGGCGCATCAGCTTGAGTTGCTATCGAATCTGATTTGCCGGGCCTTGCGCAAATAA", 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"gene_synonym", - "gyrI" - ], - [ - "gene_synonym", - "ECK2003" - ], - [ - "gene_synonym", - "EcoGene:EG11892" - ], - [ - "gene_synonym", - "JW1991" - ], - [ - "gene_synonym", - "GI:16129950" - ], - [ - "gene_synonym", - "ASAP:ABE-0006670" - ], - [ - "gene_synonym", - "sbmC" - ], - [ - "gene_synonym", - "NP_416513.1" - ] - ], - "dna_sequence": "ATGAACTACGAGATTAAGCAGGAAGAGAAACGTACCGTTGCAGGTTTCCATCTCGTTGGCCCGTGGGAACAGACGGTAAAGAAAGGCTTTGAGCAGTTGATGATGTGGGTAGATAGCAAAAATATTGTGCCGAAGGAGTGGGTTGCTGTCTATTACGACAATCCAGATGAAACACCCGCCGAAAAATTACGCTGCGACACCGTCGTGACGGTGCCGGGTTACTTTACGCTTCCCGAAAACAGTGAGGGCGTCATTCTGACAGAAATTACAGGTGGTCAGTATGCGGTGGCGGTAGCTCGTGTAGTCGGTGATGATTTTGCTAAACCCTGGTATCAGTTCTTTAATAGTCTCTTGCAGGACAGTGCTTATGAAATGTTACCAAAGCCCTGCTTCGAGGTTTATTTGAACAATGGCGCGGAAGATGGGTACTGGGATATCGAAATGTATGTTGCGGTGCAGCCAAAACATCACTAA", - "dna_sequence_length": 474, - "functions": [ - "DNA gyrase inhibitor" - ], - "id": "CDS_1992", - "location": [ - [ - "NC_000913", - 2081262, - "-", - 474 - ] - ], - "md5": "0ce2ee249169f5b80841d169bbe80122", - "parent_gene": "", - "protein_md5": "8aa62ad54534691c9963a1c34edc7e3d", - "protein_translation": "MNYEIKQEEKRTVAGFHLVGPWEQTVKKGFEQLMMWVDSKNIVPKEWVAVYYDNPDETPAEKLRCDTVVTVPGYFTLPENSEGVILTEITGGQYAVAVARVVGDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAEDGYWDIEMYVAVQPKHH", - "protein_translation_length": 157, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:162135904" - ], - [ - "gene_synonym", - "NP_416514.4" - ], - [ - "gene_synonym", - "b2010" - ], - [ - "gene_synonym", - "dacD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33013" - ], - [ - "gene_synonym", - "phsE" - ], - [ - "gene_synonym", - "ASAP:ABE-0006680" - ], - [ - "gene_synonym", - "EcoGene:EG11893" - ], - [ - "gene_synonym", - "phsF" - ], - [ - "gene_synonym", - "JW5329" - ], - [ - "gene_synonym", - "ECK2004" - ], - [ - "gene_synonym", - "GeneID:946518" - ], - [ - "gene_synonym", - "yeeC" - ] - ], - "dna_sequence": "TTGAAACGCCGTCTTATTATTGCTGCTTCTTTGTTCGTTTTTAACTTATCGTCTGGTTTTGCGGCGGAAAACATTCCTTTTTCACCTCAGCCTCCAGAGATTCATGCCGGGTCCTGGGTATTGATGGATTACACCACCGGTCAGATCCTCACCGCGGGTAATGAGCATCAACAGCGCAATCCCGCCAGCCTGACAAAGCTGATGACGGGTTATGTCGTGGATCGCGCTATCGATAGTCATCGCATTACGCCAGACGATATTGTCACCGTGGGGCGCGATGCGTGGGCGAAAGATAATCCGGTGTTTGTCGGTTCTTCACTGATGTTTTTGAAAGAGGGCGATCGCGTATCGGTACGTGATTTAAGCCGTGGTTTAATTGTGGATTCCGGAAATGACGCTTGTGTTGCTCTGGCTGACTATATTGCCGGTGGGCAACGGCAGTTTGTTGAAATGATGAACAACTATGCCGAGAAGCTGCATCTCAAGGATACGCATTTTGAAACAGTGCATGGTCTGGATGCACCTGGCCAGCATAGCTCGGCTTATGATTTAGCTGTGCTTTCTCGTGCTATCATCCACGGCGAGCCCGAGTTTTATCATATGTACAGTGAGAAAAGTCTCACCTGGAACGGTATCACCCAGCAAAACCGTAACGGGTTGTTGTGGGATAAAACCATGAATGTTGACGGCCTGAAAACGGGTCATACTTCTGGTGCCGGGTTTAATCTCATTGCTTCGGCTGTAGATGGGCAGCGTCGTCTCATTGCAGTGGTAATGGGGGCTGACAGTGCAAAAGGTCGTGAGGAAGAGGCAAGAAAATTACTGCGTTGGGGGCAACAAAACTTTACTACGGTGCAAATTTTGCACCGTGGGAAAAAGGTCGGAACGGAACGCATCTGGTATGGCGATAAAGAAAATATCGACCTGGGAACGGAACAAGAGTTCTGGATGGTGCTACCGAAAGCCGAAATTCCACATATCAAAGCCAAATATACCCTTGATGGTAAAGAACTCACCGCGCCAATTAGCGCCCATCAGCGGGTAGGGGAAATTGAACTTTACGACCGTGATAAACAGGTGGCGCACTGGCCGCTGGTTACCCTGGAATCTGTCGGGGAAGGCAGCATGTTTTCTCGCCTGAGTGATTATTTCCACCATAAGGCCTGA", 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], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04995" - ], - [ - "gene_synonym", - "cpeA" - ], - [ - "gene_synonym", - "sbcB" - ], - [ - "gene_synonym", - "JW1993" - ], - [ - "gene_synonym", - "xonA" - ], - [ - "gene_synonym", - "GI:16129952" - ], - [ - "gene_synonym", - "ECK2005" - ], - [ - "gene_synonym", - "EcoGene:EG10926" - ] - ], - "dna_sequence": "ATGATGAATGACGGTAAGCAACAATCTACCTTTTTGTTTCACGATTACGAAACCTTTGGCACGCACCCCGCGTTAGATCGCCCTGCACAGTTCGCAGCCATTCGCACCGATAGCGAATTCAATGTCATCGGCGAACCCGAAGTCTTTTACTGCAAGCCCGCTGATGACTATTTACCCCAGCCAGGAGCCGTATTAATTACCGGTATTACCCCGCAGGAAGCACGGGCGAAAGGAGAAAACGAAGCCGCGTTTGCCGCCCGTATTCACTCGCTTTTTACCGTACCGAAGACCTGTATTCTGGGCTACAACAATGTGCGTTTCGACGACGAAGTCACACGCAACATTTTTTATCGTAATTTCTACGATCCTTACGCCTGGAGCTGGCAGCATGATAACTCGCGCTGGGATTTACTGGATGTTATGCGTGCCTGTTATGCCCTGCGCCCGGAAGGAATAAACTGGCCTGAAAATGATGACGGTCTACCGAGCTTTCGCCTTGAGCATTTAACCAAAGCGAATGGTATTGAACATAGCAACGCCCACGATGCGATGGCTGATGTGTACGCCACTATTGCGATGGCAAAGCTGGTAAAAACGCGTCAGCCACGCCTGTTTGATTATCTCTTTACCCATCGTAATAAACACAAACTGATGGCGTTGATTGATGTTCCGCAGATGAAACCCCTGGTGCACGTTTCCGGAATGTTTGGAGCATGGCGCGGCAATACCAGCTGGGTGGCACCGCTGGCGTGGCATCCTGAAAATCGCAATGCCGTAATTATGGTGGATTTGGCAGGAGACATTTCGCCATTACTGGAACTGGATAGCGACACATTGCGCGAGCGTTTATATACCGCAAAAACCGATCTTGGCGATAACGCCGCCGTTCCGGTTAAGCTGGTGCATATCAATAAATGTCCGGTGCTGGCCCAGGCGAATACGCTACGCCCGGAAGATGCCGACCGACTGGGAATTAATCGTCAGCATTGCCTCGATAACCTGAAAATTCTGCGTGAAAATCCGCAAGTGCGCGAAAAAGTGGTGGCGATATTCGCGGAAGCCGAACCGTTTACGCCTTCAGATAACGTGGATGCACAGCTTTATAACGGCTTTTTCAGTGACGCAGATCGTGCAGCAATGAAAATTGTGCTGGAAACCGAGCCGCGTAATTTACCGGCACTGGATATCACTTTTGTTGATAAACGGATTGAAAAGCTGTTGTTCAATTATCGGGCACGCAACTTCCCGGGGACGCTGGATTATGCCGAGCAGCAACGCTGGCTGGAGCACCGTCGCCAGGTCTTCACGCCAGAGTTTTTGCAGGGTTATGCTGATGAATTGCAGATGCTGGTACAACAATATGCCGATGACAAAGAGAAAGTGGCGCTGTTAAAAGCACTTTGGCAGTACGCGGAAGAGATTGTCTAA", 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- ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33014" - ], - [ - "gene_synonym", - "ECK2006" - ], - [ - "gene_synonym", - "JW1994" - ], - [ - "gene_synonym", - "GI:16129953" - ], - [ - "gene_synonym", - "ASAP:ABE-0006688" - ], - [ - "gene_synonym", - "EcoGene:EG11894" - ], - [ - "gene_synonym", - "NP_416516.1" - ] - ], - "dna_sequence": "ATGGTGATTAAAAAGCTGGATGTGGTGACGCAGGTCTGTCCGTTTCCACTCATAGAAGCAAAAGCAGCTCTGGCAGAAATGGTCAGCGGCGATGAGTTAGTGATTGAGTTTGATTGCACCCAGGCAACTGAAGCAATCCCACAGTGGGCGGCAGAAGAAGGACATGCCATCACCGATTATCAGCAGATTGGCGATGCAGCGTGGAGCATCACCGTTCAAAAAGCCTGA", - "dna_sequence_length": 228, - "functions": [ - "putative TusA family sulfurtransferase" - ], - "id": "CDS_1995", - "location": [ - [ - "NC_000913", - 2084453, - "-", - 228 - ] - ], - "md5": "47d1438a81192aafe093d352cbe8da0f", - "parent_gene": "", - "protein_md5": "4b456bcd106a32420eb773446fea10a3", - "protein_translation": "MVIKKLDVVTQVCPFPLIEAKAALAEMVSGDELVIEFDCTQATEAIPQWAAEEGHAITDYQQIGDAAWSITVQKA", - "protein_translation_length": 75, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33015" - ], - [ - "gene_synonym", - "GeneID:946526" - ], - [ - "gene_synonym", - "b2013" - ], - [ - "gene_synonym", - "yeeE" - ], - [ - "gene_synonym", - "GI:16129954" - ], - [ - "gene_synonym", - "ASAP:ABE-0006691" - ], - [ - "gene_synonym", - "ECK2007" - ], - [ - "gene_synonym", - "JW1995" - ], - [ - "gene_synonym", - "NP_416517.1" - ], - [ - "gene_synonym", - "EcoGene:EG11895" - ] - ], - "dna_sequence": "ATGTTTTCAATGATATTAAGCGGGCTAATTTGTGGTGCTCTGCTGGGATTTGTCATGCAGCGTGGGCGTTTTTGCCTGACAGGTGGTTTTCGCGATATGTATATCGTGAAAAATAATCGCATGTTTTACGCCTTGCTGATTGCAATTTCGGTACAAAGCGTGGGGGTTTTTGCGTTAATTCAGGCGGGCCTACTGACTTACGAAGCCGGGGCGTTCCCGTGGCTTGGTACTGTTATAGGTGGGTATATCTTCGGGCTGGGAATTGTTCTGGCGGGTGGATGTGCCACCGGGACCTGGTATCGCGCGGGTGAGGGATTGATCGGCAGTTGGATCGCGCTTTTCACTTATATGGTGATGAGTGCGGTGATGCGTTCTCCACATGCCAGTGGTTTAAATCAAACCTTGCAGCACTACAGTACTGAACATAACTCTATTGCTGAGACTTTTAATTTGTCTGTGTGGCCGTTGGTTGCCGTTTTGCTGGTGATAACGCTCTGGGTGGTGATGAAAGAGTTGAAGAAGCCAAAACTCAAAGTCGCGACCTTACCGCCGCGCCGAACCGGGATCGCTCATATTCTGTTTGAAAAACGCTGGCATCCCTTTGTCACAGCTGTACTCATCGGTTTGATTGCGCTTTTAGCCTGGCCCCTGAGTGAAGCAACCGGACGCATGTTTGGGTTAGGAATCACTTCCCCAACGGCCAATATTCTGCAATTTCTGGTCGCGGGTGACATGAAATACATTAACTGGGGCGTTTTCCTGGTGTTAGGGATCTTCGTGGGGTCATTTATTGCAGCCAAAGCGAGCCGTGAGTTCCGCGTTCGCGCAGCTGATGCACAAACAACATTACGTAGCGGGTTAGGTGGTGTACTGATGGGCTTCGGTGCCAGTATTGCAGGTGGTTGCTCTATCGGTAATGGACTGGTTATGACTGCAATGATGACCTGGCAGGGCTGGATTGGCCTTGTATTTATGATTCTCGGAGTCTGGACTGCGTCCTGGCTTGTGTATGTTCGACCGCAGCGTAAGGCGCGACTGGCAACTGCTGCGGCAAATTAA", 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"gene_synonym", - "yeeF" - ], - [ - "gene_synonym", - "ASAP:ABE-0006696" - ], - [ - "gene_synonym", - "EcoGene:EG11896" - ], - [ - "gene_synonym", - "ECK2008" - ], - [ - "gene_synonym", - "GI:90111370" - ], - [ - "gene_synonym", - "JW5330" - ] - ], - "dna_sequence": "ATGTCGCATAACGTTACTCCAAACACCTCTCGCGTGGAATTGCGTAAAACGCTTACGTTAGTTCCGGTTGTAATGATGGGTCTTGCCTATATGCAGCCGATGACGCTGTTTGATACTTTTGGTATCGTTTCAGGCCTCACGGATGGTCATGTGCCGACAGCCTATGCGTTCGCATTGATTGCGATCCTGTTTACGGCTCTGAGCTACGGGAAGCTGGTTCGCCGCTATCCTTCTGCTGGCTCTGCATACACTTACGCCCAGAAATCCATTAGCCCGACTGTCGGCTTTATGGTGGGTTGGTCTTCTCTGCTCGACTATCTGTTCGCGCCGATGATCAACATTCTACTGGCGAAAATCTATTTTGAAGCTCTGGTGCCTTCCATCCCATCGTGGATGTTTGTGGTGGCGCTGGTGGCCTTTATGACCGCCTTTAACCTGCGTAGTCTGAAATCCGTAGCGAACTTCAACACTGTAATCGTCGTGTTGCAGGTAGTGCTGATCGCGGTGATTCTGGGCATGGTTGTTTATGGCGTATTTGAAGGTGAAGGCGCTGGTACGCTGGCGAGCACTCGTCCATTCTGGTCTGGCGATGCGCATGTTATCCCGATGATTACCGGGGCGACAATCCTGTGCTTCTCCTTTACCGGCTTTGACGGCATCAGCAACCTGTCGGAAGAAACCAAAGATGCAGAGCGCGTGATCCCGCGTGCGATTTTCCTGACCGCGCTGATCGGCGGCATGATCTTCATCTTTGCAACTTACTTCCTGCAGCTGTACTTCCCGGATATCTCTCGCTTTAAAGATCCGGATGCGTCACAGCCTGAAATCATGCTGTACGTTGCGGGTAAAGCGTTCCAGGTTGGCGCGCTGATCTTCTCCACCATTACCGTACTGGCGTCCGGTATGGCGGCGCATGCAGGCGTAGCGCGTCTGATGTACGTAATGGGTCGTGACGGCGTATTCCCGAAAAGCTTCTTCGGTTATGTACACCCGAAATGGCGTACTCCGGCGATGAACATCATCCTGGTTGGCGCGATTGCCCTGCTGGCAATCAACTTCGACCTGGTAATGGCAACGGCGCTGATTAACTTTGGTGCGCTGGTGGCGTTCACTTTCGTTAACCTGTCGGTCATCTCGCAGTTCTGGATCCGTGAGAAGCGTAACAAGACGCTGAAAGATCACTTCCAGTATCTGTTCCTGCCGATGTGTGGTGCGCTGACCGTTGGTGCGCTGTGGGTTAACCTGGAAGAAAGCTCAATGGTTCTGGGTCTGATCTGGGCTGCTATCGGTCTGATTTACCTGGCTTGCGTCACCAAGAGCTTCCGTAATCCGGTTCCGCAGTACGAAGACGTAGCATAA", 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], - [ - "gene_synonym", - "GI:226524728" - ], - [ - "gene_synonym", - "yoeI" - ], - [ - "gene_synonym", - "b4678" - ], - [ - "gene_synonym", - "GeneID:7751643" - ], - [ - "gene_synonym", - "YP_002791246.1" - ] - ], - "dna_sequence": "ATGGGGCAATTTTTTGCTTACGCGACGGTTATCACCGTAAAGGAGAATGACCATGTCGCATAA", - "dna_sequence_length": 63, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_1998", - "location": [ - [ - "NC_000913", - 2087114, - "-", - 63 - ] - ], - "md5": "825c423dbb4cea83f9ec6f82296473be", - "parent_gene": "", - "protein_md5": "9139e51a0097ebbff75f9f9735dc7d85", - "protein_translation": "MGQFFAYATVITVKENDHVA", - "protein_translation_length": 20, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946532" - ], - [ - "gene_synonym", - "NP_416519.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76369" - ], - [ - "gene_synonym", - "b2015" - ], - [ - "gene_synonym", - "yeeY" - ], - [ - "gene_synonym", - "ASAP:ABE-0006700" - ], - [ - "gene_synonym", 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"ATGAAACCACTGCTGGATGTGTTGATGATCCTCGATGCCTTAGAAAAAGAAGGCAGTTTTGCGGCGGCGTCGGCCAAACTCTACAAGACGCCGTCCGCTCTGAGTTACACCGTTCACAAGCTGGAAAGCGACCTTAATATTCAATTGCTTGATCGTAGCGGACACCGCGCTAAATTCACCCGCACCGGAAAAATGTTATTAGAGAAAGGGCGGGAAGTTCTGCATACCGTGCGGGAACTGGAAAAGCAGGCGATCAAACTGCATGAAGGCTGGGAAAACGAGCTGGTGATTGGCGTGGACGACACGTTTCCTTTTTCTCTGCTTGCGCCACTCATTGAAGCTTTTTATCAACATCATAGCGTGACGCGCCTGAAGTTTATCAATGGCGTACTCGGTGGTTCATGGGATGCCCTGACTCAGGGGCGAGCGGATATTATTGTTGGCGCGATGCATGAGCCACCATCTTCCAGTGAGTTTGGTTTTTCACGGTTGGGCGATCTGGAACAAGTCTTTGCGGTCGCGCCTCATCATCCGTTAGCCCTGGAAGAAGAGCCGTTAAATCGTCGTATTATTAAGCGATATCGGGCGATTGTGGTGGGGGATACTGCGCAGGCAGGCGCTTCTACGGCATCACAACTTCTCGACGAACAAGAAGCCATTACCGTTTTCGATTTTAAAACCAAACTGGAGCTGCAAATTAGCGGCCTCGGCTGCGGCTATTTACCCCGTTATCTGGCGCAACGTTTTCTCGATAGTGGCGCGTTAATCGAGAAGAAAGTGGTCGCCCAAACTCTCTTTGAACCCGTCTGGATTGGCTGGAACGAACAGACCGCAGGACTTGCCAGTGGCTGGTGGCGGGATGAAATTTTAGCAAATAGTGCGATCGCCGGTGTTTATGCAAAATCTGATGACGGAAAATCAGCCATTTAA", - "dna_sequence_length": 930, - "functions": [ - "LysR family 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"gene_synonym", - "JW1998" - ], - [ - "gene_synonym", - "yeeZ" - ], - [ - "gene_synonym", - "NP_416520.1" - ] - ], - "dna_sequence": "ATGAAAAAGGTCGCAATTGTCGGGTTAGGGTGGTTAGGCATGCCGCTGGCGATGTCACTTTCAGCGCGAGGCTGGCAAGTCACCGGGAGTAAAACCACACAAGATGGTGTCGAAGCGGCCCGAATGAGTGGCATTGATAGCTATCTGCTTCGCATGGAGCCTGAGCTAGTTTGCGATTCTGACGATCTGGATGCCCTGATGGATGCCGATGCGCTGGTCATTACGCTTCCGGCACGTCGTAGCGGCCCCGGCGATGAGTTCTATTTACAAGCGGTACAAGAGTTAGTGGATAGCGCGCTGGCCCATCGTATTCCCCGCATTATTTTTACCAGCTCAACATCTGTCTATGGCGACGCGCAAGGCACGGTGAAAGAAACCACCCCGCGTAATCCAGTAACCAACAGTGGACGAGTATTAGAAGAACTCGAAGACTGGCTGCACAATTTACCCGGTACTTCGGTCGATATTCTGCGTCTTGCGGGCCTGGTCGGACCGGGACGTCATCCCGGACGCTTCTTTGCCGGAAAAACCGCGCCTGATGGTGAACATGGTGTTAATTTAGTCCATTTAGAAGATGTTATTGGCGCTATCACTCTGTTGTTACAGGCACCTAAAGGCGGACACATCTATAATATATGTGCGCCAGCTCACCCTGCGCGTAATGTTTTCTATCCGCAGATGGCCCGTTTACTGGGGCTGGAACCTCCGCAGTTCAGAAATAGTCTGGACAGCGGCAAAGGTAAGATTATTGATGGCAGTCGGATTTGTAATGAACTGGGATTTGAATACCAGTATCCCGATCCGCTGGTAATGCCGCTGGAGTAA", - "dna_sequence_length": 825, - 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"gene_synonym", - "yoeB" - ], - [ - "gene_synonym", - "JW5331" - ] - ], - "dna_sequence": "GTGAAACTAATCTGGTCTGAGGAATCATGGGACGATTATCTGTACTGGCAGGAAACAGATAAGCGAATTGTTAAAAAGATCAATGAACTTATCAAAGATACCCGCAGAACGCCATTTGAAGGTAAGGGGAAGCCAGAACCCCTGAAACATAATTTGTCAGGTTTCTGGTCCCGACGCATTACAGAGGAGCACCGTCTGGTATACGCGGTTACCGACGATTCACTGCTCATTGCAGCATGTCGTTATCATTATTGA", - "dna_sequence_length": 255, - "functions": [ - "toxin of the YoeB-YefM toxin-antitoxin system" - ], - "id": "CDS_2001", - "location": [ - [ - "NC_000913", - 2089465, - "-", - 255 - ] - ], - "md5": "b80c40f1524bf0306db2da54cf73d614", - "parent_gene": "", - "protein_md5": "411587148d95097537c316c67e7e3072", - "protein_translation": "MKLIWSEESWDDYLYWQETDKRIVKKINELIKDTRRTPFEGKGKPEPLKHNLSGFWSRRITEEHRLVYAVTDDSLLIAACRYHY", - "protein_translation_length": 84, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12844" - ], - [ - "gene_synonym", - "GeneID:946542" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69346" - ], - 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"protein_translation_length": 83, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2018" - ], - [ - "gene_synonym", - "JW2000" - ], - [ - "gene_synonym", - "NP_416522.1" - ], - [ - "gene_synonym", - "hisL" - ], - [ - "gene_synonym", - "GeneID:946547" - ], - [ - "gene_synonym", - "ASAP:ABE-0006710" - ], - [ - "gene_synonym", - "EcoGene:EG11269" - ], - [ - "gene_synonym", - "ECK2013" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60995" - ], - [ - "gene_synonym", - "GI:16129959" - ] - ], - "dna_sequence": "ATGACACGCGTTCAATTTAAACACCACCATCATCACCATCATCCTGACTAG", - "dna_sequence_length": 51, - "functions": [ - "his operon leader peptide" - ], - "id": "CDS_2003", - "location": [ - [ - "NC_000913", - 2089996, - "+", - 51 - ] - ], - "md5": "396765bfdae4c9ce9362931fd1286f0b", - "parent_gene": "", - "protein_md5": "115d5a4081836103ad363b4a5bd0f9dd", - "protein_translation": "MTRVQFKHHHHHHHPD", - "protein_translation_length": 16, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946549" - ], - [ - "gene_synonym", - "hisG" - ], - [ - "gene_synonym", - "JW2001" - ], - [ - "gene_synonym", - "GI:16129960" - ], - [ - "gene_synonym", - "ASAP:ABE-0006713" - ], - [ - "gene_synonym", - "ECK2014" - ], - [ - "gene_synonym", - "b2019" - ], - [ - "gene_synonym", - "EcoGene:EG10449" - ], - [ - "gene_synonym", - "NP_416523.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60757" - ] - ], - "dna_sequence": 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"gene_synonym", - "UniProtKB/Swiss-Prot:P06986" - ], - [ - "gene_synonym", - "ASAP:ABE-0006717" - ], - [ - "gene_synonym", - "GI:16129962" - ], - [ - "gene_synonym", - "ECK2016" - ], - [ - "gene_synonym", - "NP_416525.1" - ], - [ - "gene_synonym", - "b2021" - ], - [ - "gene_synonym", - "GeneID:946551" - ] - ], - "dna_sequence": "ATGAGCACCGTGACTATTACCGATTTAGCGCGTGAAAACGTCCGCAACCTGACGCCGTATCAGTCGGCGCGTCGTCTGGGCGGTAACGGCGATGTCTGGCTGAACGCCAACGAATACCCCACTGCCGTGGAGTTTCAGCTTACTCAGCAAACGCTCAACCGCTACCCGGAATGCCAGCCGAAAGCGGTGATTGAAAATTACGCGCAATATGCAGGCGTAAAACCGGAGCAGGTGCTGGTCAGCCGTGGCGCGGACGAAGGTATTGAACTGCTGATTCGCGCTTTTTGCGAACCGGGTAAAGACGCCATCCTCTACTGCCCGCCAACGTACGGCATGTACAGCGTCAGCGCCGAAACGATTGGCGTCGAGTGCCGCACAGTGCCGACGCTGGACAACTGGCAACTGGACTTACAGGGCATTTCCGACAAGCTGGACGGCGTAAAAGTGGTTTATGTTTGCAGCCCCAATAACCCGACCGGGCAACTGATCAATCCGCAGGATTTTCGCACCCTGCTGGAGTTAACCCGCGGTAAGGCGATTGTGGTTGCCGATGAAGCCTATATCGAGTTTTGCCCGCAGGCATCGCTGGCTGGCTGGCTGGCGGAATATCCGCACCTGGCTATTTTACGCACACTGTCGAAAGCTTTTGCTCTGGCGGGGCTTCGTTGCGGATTTACGCTGGCAAACGAAGAAGTCATCAACCTGCTGATGAAAGTGATCGCCCCCTACCCGCTCTCGACGCCGGTTGCCGACATTGCGGCCCAGGCGTTAAGCCCACAGGGAATCGTCGCCATGCGCGAACGGGTAGCGCAAATTATTGCAGAACGCGAATACCTGATTGCCGCACTGAAAGAGATCCCCTGCGTAGAGCAGGTTTTCGACTCTGAAACCAACTACATTCTGGCGCGCTTTAAAGCCTCCAGTGCGGTGTTTAAATCTTTGTGGGATCAGGGCATTATCTTACGTGATCAGAATAAACAACCCTCTTTAAGCGGCTGCCTGCGAATTACCGTCGGAACCCGTGAAGAAAGCCAGCGCGTCATTGACGCCTTACGTGCGGAGCAAGTTTGA", 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"gene_synonym", - "ASAP:ABE-0006720" - ], - [ - "gene_synonym", - "ECK2017" - ], - [ - "gene_synonym", - "b2022" - ], - [ - "gene_synonym", - "GI:90111373" - ], - [ - "gene_synonym", - "EcoGene:EG10445" - ] - ], - "dna_sequence": "ATGAGTCAGAAGTATCTTTTTATCGATCGCGATGGAACCCTGATTAGCGAACCGCCGAGTGATTTTCAGGTGGACCGTTTTGATAAACTCGCCTTTGAACCGGGCGTGATCCCGGAACTGCTGAAGCTGCAAAAAGCGGGCTACAAGCTGGTGATGATCACTAATCAGGATGGTCTTGGAACACAAAGTTTCCCACAGGCGGATTTCGATGGCCCGCACAACCTGATGATGCAGATCTTCACCTCGCAAGGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAGCCGAAAGTAAAACTGGTGGAACGTTATCTGGCTGAGCAAGCGATGGATCGCGCTAACAGTTATGTGATTGGCGATCGCGCGACCGACATTCAACTGGCGGAAAACATGGGCATTACTGGTTTACGCTACGACCGCGAAACCCTGAACTGGCCAATGATTGGCGAGCAACTCACCAGACGTGACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAATGCCTTGCCCGCTGCGCGCTGGATATCTCTGGTCGCCCGCACCTGGAATATAAAGCCGAGTTTACCTACCAGCGCGTGGGCGATCTCAGCACCGAAATGATCGAGCACTTCTTCCGTTCGCTCTCATACACCATGGGCGTGACGCTACACCTGAAAACCAAAGGTAAAAACGATCATCACCGTGTAGAGAGTCTGTTCAAAGCCTTTGGTCGCACCCTGCGCCAGGCCATCCGCGTGGAAGGCGATACCCTGCCCTCGTCGAAAGGAGTGCTGTAA", - "dna_sequence_length": 1068, - "functions": [ - "histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase" - ], - "id": "CDS_2007", - "location": [ - [ - "NC_000913", - 2093468, - "+", - 1068 - ] - ], - "md5": "ce837e412fc2a589adfe9077cee94eec", - "parent_gene": "", - "protein_md5": "3a1dc7b17eef302acd65c1b776272a30", - "protein_translation": "MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGITGLRYDRETLNWPMIGEQLTRRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALGEALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL", - "protein_translation_length": 355, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2005" - ], - [ - "gene_synonym", - "NP_416527.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006722" - ], - [ - "gene_synonym", - "hisH" - ], - [ - "gene_synonym", - "GI:16129964" - ], - [ - "gene_synonym", - "GeneID:946544" - ], - [ - "gene_synonym", - "EcoGene:EG10450" - ], - [ - "gene_synonym", - "b2023" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60595" - ], - [ - "gene_synonym", - "ECK2018" - ] - ], - "dna_sequence": "ATGAACGTGGTGATCCTTGATACCGGCTGCGCCAACCTGAACTCGGTGAAGTCTGCCATTGCGCGTCACGGTTATGAACCCAAAGTCAGCCGTGACCCGGACGTCGTGTTGCTGGCCGATAAACTGTTTTTACCCGGCGTTGGCACTGCGCAAGCGGCGATGGATCAGGTACGTGAGCGCGAGCTGTTTGATCTCATCAAAGCCTGTACCCAACCGGTGCTGGGCATCTGCTTAGGGATGCAACTGCTGGGGCGGCGCAGCGAAGAGAGCAACGGCGTCGACTTGCTGGGCATCATCGACGAAGACGTGCCGAAAATGACCGACTTTGGTCTGCCACTGCCACATATGGGCTGGAACCGCGTTTACCCGCAGGCAGGCAACCGCCTGTTTCAGGGGATTGAAGACGGCGCGTACTTTTACTTTGTTCACAGCTACGCAATGCCGGTCAATCCGTGGACCATCGCCCAGTGTAATTACGGCGAACCGTTCACCGCGGCGGTACAAAAAGATAACTTCTACGGCGTGCAGTTCCACCCGGAGCGTTCTGGTGCCGCTGGTGCTAAGTTGCTGAAAAACTTCCTGGAGATGTGA", - "dna_sequence_length": 591, - "functions": [ - "imidazole glycerol phosphate synthase, glutamine amidotransferase subunit" - ], - "id": "CDS_2008", - "location": [ - [ - "NC_000913", - 2094535, - "+", - 591 - ] - ], - "md5": "8ce677f19f3277e3511374bc523a66b5", - "parent_gene": "", - "protein_md5": "238e25162c0a2ea5ef8b1029e602d964", - "protein_translation": "MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFLPGVGTAQAAMDQVRERELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYGEPFTAAVQKDNFYGVQFHPERSGAAGAKLLKNFLEM", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946521" - ], - [ - "gene_synonym", - "JW2006" - ], - [ - "gene_synonym", - "hisA" - ], - [ - "gene_synonym", - "NP_416528.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10371" - ], - [ - "gene_synonym", - "b2024" - ], - [ - "gene_synonym", - "EcoGene:EG10444" - ], - [ - "gene_synonym", - "ASAP:ABE-0006725" - ], - [ - "gene_synonym", - "GI:90111374" - ], - [ - "gene_synonym", - "ECK2019" - ] - ], - "dna_sequence": "ATGATTATTCCGGCATTAGATTTAATCGACGGCACTGTGGTGCGTCTCCATCAGGGCGATTACGGCAAACAGCGCGATTACGGTAACGACCCGCTGCCGCGATTGCAGGATTACGCCGCGCAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGTCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCGGGCGTTGCGCGCGTAGTGGTCGGCTCCACCGCGGTGAAATCACAAGATATGGTGAAAGGCTGGTTTGAACGCTTCGGTGCCGATGCCTTAGTGCTGGCGCTGGATGTCCGTATTGACGAGCAAGGCAACAAGCAGGTGGCAGTCAGCGGCTGGCAAGAGAACTCGGGCGTTTCACTGGAACAACTGGTGGAAACCTATCTGCCCGTCGGCCTGAAACATGTGCTGTGTACCGATATCTCGCGCGACGGCACGCTGGCAGGCTCTAACGTCTCTTTATATGAAGAAGTGTGCGCCAGATATCCGCAGGTGGCATTTCAGTCCTCCGGCGGTATTGGCGACATTGATGATGTGGCGGCCCTGCGTGGCACTGGTGTGCGCGGCGTAATAGTTGGTCGGGCATTACTGGAAGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAA", - "dna_sequence_length": 738, - "functions": [ - "N-(5'-phospho-L-ribosyl-formimino)-5-amino-1- (5'-phosphoribosyl)-4-imidazolecarboxamide isomerase" - ], - "id": "CDS_2009", - "location": [ - [ - "NC_000913", - 2095125, - "+", - 738 - ] - ], - "md5": "0380e2a4b5f054e03a2183916e3e8d39", - "parent_gene": "", - "protein_md5": "d0e414c80f3f2a6141ce92d4c01e989d", - "protein_translation": "MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVGSTAVKSQDMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGTGVRGVIVGRALLEGKFTVKEAIACWQNA", - "protein_translation_length": 245, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416529.1" - ], - [ - "gene_synonym", - "hisF" - ], - [ - "gene_synonym", - "ECK2020" - ], - [ - "gene_synonym", - "ASAP:ABE-0006727" - ], - [ - "gene_synonym", - "JW2007" - ], - [ - "gene_synonym", - "GI:16129966" - ], - [ - "gene_synonym", - "b2025" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60664" - ], - [ - "gene_synonym", - "EcoGene:EG10448" - ], - [ - "gene_synonym", - "GeneID:946516" - ] - ], - "dna_sequence": "ATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGATATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGTGTGGCGGGTGGGATTAAGTCTCTGGAAGATGCCGCGAAAATTCTTTCCTTTGGCGCGGATAAAATTTCCATCAACTCTCCTGCGCTGGCAGACCCAACATTAATTACTCGCCTGGCCGATCGCTTTGGCGTGCAGTGTATTGTGGTCGGTATTGATACCTGGTACGACGCCGAAACCGGTAAATATCATGTGAATCAATATACCGGCGATGAAAGCCGCACCCGCGTCACTCAATGGGAAACGCTCGACTGGGTACAGGAAGTGCAAAAACGCGGTGCCGGAGAAATCGTCCTCAATATGATGAATCAGGACGGCGTGCGTAACGGTTACGACCTCGAACAACTGAAAAAAGTGCGTGAAGTTTGCCACGTCCCGCTGATTGCCTCCGGTGGCGCGGGCACCATGGAACACTTCCTCGAAGCCTTCCGCGATGCCGACGTTGACGGCGCGCTGGCAGCTTCCGTATTCCACAAACAAATAATCAATATTGGTGAATTAAAAGCGTACCTGGCAACACAGGGCGTGGAGATCAGGATATGTTAA", - "dna_sequence_length": 777, - "functions": [ - "imidazole glycerol phosphate synthase, catalytic subunit with HisH" - ], - "id": "CDS_2010", - "location": [ - [ - "NC_000913", - 2095844, - "+", - 777 - ] - ], - "md5": "519d9fe3fbc2ae2fd9a64a80af2a4afa", - "parent_gene": "", - "protein_md5": "5efa2c074e05b0c70cfb1f83c789005a", - "protein_translation": "MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC", - "protein_translation_length": 258, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hisE" - ], - [ - "gene_synonym", - "ASAP:ABE-0006729" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06989" - ], - [ - "gene_synonym", - "ECK2021" - ], - [ - "gene_synonym", - "JW2008" - ], - [ - "gene_synonym", - "GI:16129967" - ], - [ - "gene_synonym", - "hisI" - ], - [ - "gene_synonym", - "b2026" - ], - [ - "gene_synonym", - "EcoGene:EG10451" - ], - [ - "gene_synonym", - "hisIE" - ], - [ - "gene_synonym", - "GeneID:946515" - ], - [ - "gene_synonym", - "NP_416530.1" - ] - ], - "dna_sequence": "ATGTTAACAGAACAACAACGTCGCGAACTGGACTGGGAAAAAACCGACGGACTTATGCCGGTGATTGTGCAACACGCGGTATCCGGCGAAGTGCTAATGCTGGGCTATATGAACCCGGAAGCCTTAGACAAAACCCTCGAAAGCGGCAAAGTCACCTTCTTCTCGCGCACTAAACAGCGACTGTGGACCAAAGGCGAAACGTCGGGCAATTTCCTCAACGTAGTGAGTATTGCCCCGGACTGCGACAACGACACGTTACTGGTGCTGGCGAATCCCATCGGCCCGACCTGCCACAAAGGCACCAGCAGTTGCTTCGGCGACACCGCTCACCAGTGGCTGTTCCTGTATCAACTGGAACAACTGCTCGCCGAGCGCAAATCTGCCGATCCGGAAACCTCCTACACCGCCAAACTGTATGCCAGCGGCACCAAACGCATTGCGCAGAAAGTGGGTGAAGAAGGCGTGGAAACCGCGCTGGCAGCAACGGTACATGACCGCTTTGAGCTGACCAACGAGGCGTCTGATTTGATGTATCACCTGCTGGTGTTGTTGCAGGATCAGGGGCTGGATTTAACGACGGTAATTGAGAACCTGCGTAAACGGCATCAGTGA", - "dna_sequence_length": 612, - "functions": [ - "phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase" - ], - "id": "CDS_2011", - "location": [ - [ - "NC_000913", - 2096614, - "+", - 612 - ] - ], - "md5": "e154bb9cfb64128fb961d10b3cec4c14", - "parent_gene": "", - "protein_md5": "7a1d64718ed2cf5dab23fc388bfb47a9", - "protein_translation": "MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDKTLESGKVTFFSRTKQRLWTKGETSGNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTSSCFGDTAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALAATVHDRFELTNEASDLMYHLLVLLQDQGLDLTTVIENLRKRHQ", - "protein_translation_length": 203, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76372" - ], - [ - "gene_synonym", - "rol" - ], - [ - "gene_synonym", - "GeneID:946553" - ], - [ - "gene_synonym", - "cld" - ], - [ - "gene_synonym", - "ASAP:ABE-0006731" - ], - [ - "gene_synonym", - "ECK2022" - ], - [ - "gene_synonym", - "b2027" - ], - [ - "gene_synonym", - "wzzB" - ], - [ - "gene_synonym", - "GI:90111375" - ], - [ - "gene_synonym", - "wzz" - ], - [ - "gene_synonym", - "EcoGene:EG13406" - ], - [ - "gene_synonym", - "NP_416531.4" - ], - [ - "gene_synonym", - "JW5836" - ] - ], - "dna_sequence": "ATGAGAGTAGAAAATAATAATGTTTCTGGGCAAAACCATGACCCGGAACAGATTGATTTGATTGATTTACTAGTGCAGTTGTGGCGTGGCAAGATGACAATCATCATTTCCGTCATTGTGGCTATTGCCCTGGCTATTGGATATTTGGCAGTAGCGAAGGAGAAATGGACGTCAACAGCAATTATCACTCAGCCCGACGTGGGGCAAATTGCTGGCTATAACAATGCCATGAATGTTATCTATGGTCAGGCTGCACCGAAAGTATCGGATTTGCAGGAGACGTTAATTGGTCGCTTCAGTTCTGCCTTCTCTGCATTAGCAGAAACGCTGGATAATCAGGAAGAACGAGAAAAACTTACCATCGAACCTTCTGTTAAGAACCAGCAATTACCATTGACTGTTTCTTATGTTGGGCAAACTGCAGAGGGCGCACAAATGAAGTTGGCCCAATACATTCAGCAAGTTGACGATAAAGTGAATCAAGAGCTAGAAAAGGATCTCAAAGACAACATTGCTCTGGGACGGAAAAACTTGCAGGACTCTTTAAGAACGCAGGAAGTAGTCGCGCAGGAGCAGAAAGATCTGCGTATCCGTCAGATTCAGGAAGCGTTGCAGTATGCGAATCAGGCGCAGGTGACAAAACCGCAGATTCAACAGACTGGCGAAGATATCACACAAGATACGTTGTTCCTTTTGGGGAGCGAAGCGCTGGAGTCGATGATTAAGCATGAGGCGACCCGTCCGTTGGTGTTCTCGCCAAACTACTATCAGACTCGTCAAAACCTGCTGGATATCGAAAGCTTAAAAGTTGATGATCTTGATATTCATGCTTACCGTTATGTGATGAAACCGATGTTACCTATTCGTCGTGATAGCCCGAAAAAGGCAATTACCTTGATTCTGGCGGTGCTGCTGGGTGGCATGGTTGGCGCGGGGATTGTGCTGGGGCGTAATGCTCTACGCAATTACAACGCGAAGTAA", - "dna_sequence_length": 981, - "functions": [ - "regulator of length of O-antigen component of lipopolysaccharide chains" - ], - "id": "CDS_2012", - "location": [ - [ - "NC_000913", - 2098301, - "-", - 981 - ] - ], - "md5": "6e61979397fd2d7fe319c75f2f0e2b99", - "parent_gene": "", - "protein_md5": "0759fc5db2198086ff19c48c621e232c", - "protein_translation": "MRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIALAIGYLAVAKEKWTSTAIITQPDVGQIAGYNNAMNVIYGQAAPKVSDLQETLIGRFSSAFSALAETLDNQEEREKLTIEPSVKNQQLPLTVSYVGQTAEGAQMKLAQYIQQVDDKVNQELEKDLKDNIALGRKNLQDSLRTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQIQQTGEDITQDTLFLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIESLKVDDLDIHAYRYVMKPMLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNALRNYNAK", - "protein_translation_length": 326, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129969" - ], - [ - "gene_synonym", - "yefA" - ], - [ - "gene_synonym", - "JW2010" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76373" - ], - [ - "gene_synonym", - "ASAP:ABE-0006734" - ], - [ - "gene_synonym", - "ECK2023" - ], - [ - "gene_synonym", - "NP_416532.1" - ], - [ - "gene_synonym", - "pmrE" - ], - [ - "gene_synonym", - "ugd" - ], - [ - "gene_synonym", - "udg" - ], - [ - "gene_synonym", - "pagA" - ], - [ - "gene_synonym", - "GeneID:946571" - ], - [ - "gene_synonym", - "EcoGene:EG13407" - ], - [ - "gene_synonym", - "b2028" - ] - ], - "dna_sequence": "ATGAAAATCACCATTTCCGGTACTGGCTATGTAGGCTTGTCAAACGGGCTTCTAATCGCACAAAATCATGAGGTTGTGGCATTAGATATTTTACCGTCACGCGTTGCTATGCTGAATGATCGGATATCTCCTATTGTTGATAAGGAAATTCAGCAGTTTTTGCAATCAGATAAAATACACTTTAATGCCACATTAGATAAAAATGAAGCCTACCGGGATGCTGATTATGTCATCATCGCCACTCCAACCGACTATGATCCTAAAACTAATTATTTCAATACATCCAGTGTAGAATCAGTAATTAAAGACGTAGTTGAGATAAATCCTTATGCGGTTATGGTCATCAAATCAACGGTTCCCGTTGGTTTTACCGCAGCGATGCATAAGAAATATCGCACTGAAAATATTATATTCTCCCCGGAATTTCTCCGTGAGGGTAAAGCCCTTTACGATAATCTCCATCCTTCACGTATTGTCATCGGTGAGCGTTCAGAACGCGCAGAACGTTTCGCTGCTCTGTTACAGGAAGGCGCGATTAAGCAAAATATCCCGATGCTGTTTACCGACTCCACTGAAGCAGAAGCGATTAAACTTTTTGCAAACACCTACCTGGCGATGCGCGTGGCGTACTTTAACGAACTGGATAGCTATGCAGAAAGTTTAGGTCTGAATTCCCGTCAAATAATCGAAGGCGTTTGTCTCGACCCACGTATTGGCAACCATTACAACAATCCGTCGTTTGGTTATGGTGGTTATTGTCTGCCGAAAGATACCAAGCAGTTACTGGCGAACTACCAGTCTGTGCCGAATAACCTGATCTCGGCAATTGTCGATGCTAACCGCACGCGTAAAGATTTTATTGCCGATGCCATTTTGTCACGCAAGCCGCAAGTGGTGGGTATTTATCGTCTGATTATGAAGAGCGGTTCAGATAACTTCCGTGCGTCTTCTATTCAGGGGATTATGAAACGTATCAAGGCGAAAGGTGTTGAAGTGATCATCTACGAGCCAGTGATGAAAGAAGACTCATTCTTCAACTCTCGCCTGGAACGTGATCTCGCCACCTTCAAACAACAAGCCGACGTCATTATCTCTAACCGAATGGCAGAAGAGCTTAAGGATGTGGCAGATAAGGTATACACCCGCGATCTCTTTGGCAGCGACTAA", 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"ECK2024" - ], - [ - "gene_synonym", - "GI:16129970" - ], - [ - "gene_synonym", - "ASAP:ABE-0006737" - ], - [ - "gene_synonym", - "EcoGene:EG10411" - ], - [ - "gene_synonym", - "gnd" - ], - [ - "gene_synonym", - "b2029" - ] - ], - "dna_sequence": "ATGTCCAAGCAACAGATCGGCGTAGTCGGTATGGCAGTGATGGGACGCAACCTTGCGCTCAACATCGAAAGCCGTGGTTATACCGTCTCTATTTTCAACCGTTCCCGTGAGAAGACGGAAGAAGTGATTGCCGAAAATCCAGGCAAGAAACTGGTTCCTTACTATACGGTGAAAGAGTTTGTCGAATCTCTGGAAACGCCTCGTCGCATCCTGTTAATGGTGAAAGCAGGTGCAGGCACGGATGCTGCTATTGATTCCCTCAAACCATATCTCGATAAAGGAGACATCATCATTGATGGTGGTAACACCTTCTTCCAGGACACTATTCGTCGTAATCGTGAGCTTTCAGCAGAGGGCTTTAACTTCATCGGTACCGGTGTTTCTGGCGGTGAAGAGGGGGCGCTGAAAGGTCCTTCTATTATGCCTGGTGGCCAGAAAGAAGCCTATGAATTGGTAGCACCGATCCTGACCAAAATCGCCGCCGTAGCTGAAGACGGTGAACCATGCGTTACCTATATTGGTGCCGATGGCGCAGGTCACTATGTGAAGATGGTTCACAACGGTATTGAATACGGCGATATGCAGCTGATTGCTGAAGCCTATTCTCTGCTTAAAGGTGGCCTGAACCTCACCAACGAAGAACTGGCGCAGACCTTTACCGAGTGGAATAACGGTGAACTGAGCAGTTACCTGATCGACATCACCAAAGATATCTTCACCAAAAAAGATGAAGACGGTAACTACCTGGTTGATGTGATCCTGGATGAAGCGGCTAACAAAGGTACCGGTAAATGGACCAGCCAGAGCGCGCTGGATCTCGGCGAACCGCTGTCGCTGATTACCGAGTCTGTGTTTGCACGTTATATCTCTTCTCTGAAAGATCAGCGTGTTGCCGCATCTAAAGTTCTCTCTGGTCCGCAAGCACAGCCAGCAGGCGACAAGGCTGAGTTCATCGAAAAAGTTCGTCGTGCGCTGTATCTGGGCAAAATCGTTTCTTACGCCCAGGGCTTCTCTCAGCTGCGTGCTGCGTCTGAAGAGTACAACTGGGATCTGAACTACGGCGAAATCGCGAAGATTTTCCGTGCTGGCTGCATCATCCGTGCGCAGTTCCTGCAGAAAATCACCGATGCTTATGCCGAAAATCCACAGATCGCTAACCTGTTGCTGGCTCCGTACTTCAAGCAAATTGCCGATGACTACCAGCAGGCGCTGCGTGATGTCGTTGCTTATGCAGTACAGAACGGTATTCCGGTTCCGACCTTCTCCGCAGCGGTTGCCTATTACGACAGCTACCGTGCTGCTGTTCTGCCTGCGAACCTGATCCAGGCACAGCGTGACTATTTTGGTGCGCATACTTATAAGCGTATTGATAAAGAAGGTGTGTTCCATACCGAATGGCTGGATTAA", - "dna_sequence_length": 1407, - "functions": [ - "6-phosphogluconate dehydrogenase, decarboxylating" - ], - "id": "CDS_2014", - "location": [ - [ - "NC_000913", - 2101268, - "-", - 1407 - ] - ], - "md5": "72c6c9f518224e7d5d9d372c83694f26", - "parent_gene": "", - "protein_md5": "1776f92beb74ff0ccd9ac47a65663644", - "protein_translation": "MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKVLSGPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRIDKEGVFHTEWLD", - "protein_translation_length": 468, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2016" - ], - [ - "gene_synonym", - "JW2012" - ], - [ - "gene_synonym", - "GeneID:4056030" - ], - [ - "gene_synonym", - "ASAP:ABE-0285061" - ], - [ - "gene_synonym", - "yefJ" - ], - [ - "gene_synonym", - "EcoGene:EG11986" - ], - [ - "gene_synonym", - "wbbL" - ], - [ - "gene_synonym", - "b4571" - ], - [ - "gene_synonym", - "ECK2025" - ], - [ - "gene_synonym", - "ASAP:ABE-0006744" - ], - [ - "gene_synonym", - "ASAP:ABE-0285104" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36667" - ] - ], - "dna_sequence": "ATGGTATATATAATAATCGTTTCCCACGGACATGAAGACTACATCAAAAAATTACTCGAAAATCTTAATGCTGACGATGAGCACTACAAGATTATCGTACGCGACAACAAAGACTCTCTATTATTGAAACAAATATGCCAGCATTATGCAGGCCTGGACTATATTAGTGGAGGTGTATACGGCTTTGGTCATAATAATAATATTGCGGTGGCGTATGTAAAGGAAAAATATAGACCCGCAGATGATGATTACATTTTGTTTTTGAATCCCGATATCATCATGAAGCATGATGATTTGCTGACATATATTAAATATGTCGAAAGTAAGCGTTATGCTTTTAGTACATTATGCCTGTTCCGAGATGAAGCGAAATCTTTACATGATTATTCCGTAAGAAAATTTCCTGTGCTTTCTGATTTTATTGTGTCATTTATGTTAGGGATTAATAAAACAAAAATTCCTAAAGAAAGTATCTATTCTGATACGGTTGTTGATTGGTGCGCAGGATCATTTATGCTGGTACGTTTTTCAGATTTTGTGCGTGTAAATGGCTTCGATCAAGGTTACTTTATGTACTGTGAAGATATTGACCTGTGCTTGAGGCTTAGCCTGGCTGGTGTCAGACTTCATTATGTTCCCGCTTTTCATGCGATACATTATGCTCATCATGACAATCGAAGTTTTTTTTCAAAAGCCTTCAGATGGCACTTAAAAAGTACTTTTAGATATTTAGCCAGAAAACGTATTTTATCAAATCGCAACTTTGATCGAATTTCATCAGTTTTTCACCCGTAA", - "dna_sequence_length": 795, - "id": "CDS_2015", - "location": [ - [ - "NC_000913", - 2103389, - "-", - 446 - ], - [ - "NC_000913", - 2101744, - "-", - 349 - ] - ], - "md5": "212492841f5916a32340269f841e509e", - "parent_gene": "", - "protein_md5": "c2d703039bd79e4fea7248224016e5dc", - "protein_translation": "MVYIIIVSHGHEDYIKKLLENLNADDEHYKIIVRDNKDSLLLKQICQHYAGLDYISGGVYGFGHNNNIAVAYVKEKYRPADDDYILFLNPDIIMKHDDLLTYIKYVESKRYAFSTLCLFRDEAKSLHDYSVRKFPVLSDFIVSFMLGINKTKIPKESIYSDTVVDWCAGSFMLVRFSDFVRVNGFDQGYFMYCEDIDLCLRLSLAGVRLHYVPAFHAIHYAHHDNRSFFSKAFRWHLKSTFRYLARKRILSNRNFDRISSVFHP", - "protein_translation_length": 264, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2030" - ], - [ - "gene_synonym", - "EcoGene:EG40008" - ], - [ - "gene_synonym", - "GeneID:946577" - ], - [ - "gene_synonym", - "GI:16129971" - ], - [ - "gene_synonym", - "insH1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CE54" - ], - [ - "gene_synonym", - "NP_416535.1" - ], - [ - "gene_synonym", - "ECK0261" - ], - [ - "gene_synonym", - "ASAP:ABE-0006742" - ] - ], - "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", - "dna_sequence_length": 1017, - "functions": [ - "IS5 transposase and trans-activator" - ], - "id": "CDS_2016", - "location": [ - [ - "NC_000913", - 2102911, - "-", - 1017 - ] - ], - "md5": "59571096a52db4971db033e04651ef59", - "parent_gene": "", - "protein_md5": "75d20978a034ac97cbf88235b32b7ad9", - "protein_translation": "MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", - "protein_translation_length": 338, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416536.1" - ], - [ - "gene_synonym", - "JW2017" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37751" - ], - [ - "gene_synonym", - "GeneID:946555" - ], - [ - "gene_synonym", - "yefI" - ], - [ - "gene_synonym", - "wbbK" - ], - [ - "gene_synonym", - "GI:16129972" - ], - [ - "gene_synonym", - "ECK2026" - ], - [ - "gene_synonym", - "EcoGene:EG11985" - ], - [ - "gene_synonym", - "b2032" - ], - [ - "gene_synonym", - "ASAP:ABE-0006747" - ] - ], - "dna_sequence": "ATGGGAAAAAGCATAGTCGTTGTTTCTGCGGTCAATTTTACCACTGGCGGTCCATTTACCATTTTGAAAAAATTTTTGGCAGCAACTAATAATAAAGAAAATGTCAGTTTTATCGCATTAGTCCATTCTGCTAAAGAGTTAAAAGAAAGTTATCCATGGGTTAAATTCATTGAGTTTCCTGAGGTTAAAGGGTCGTGGCTAAAACGTTTGCACTTTGAATATGTAGTTTGTAAAAAACTTTCAAAAGAGCTGAATGCTACGCATTGGATTTGTCTGCATGATATTACGGCCAATGTCGTCACTAAAAAAAGATATGTGTATTGTCATAACCCTGCACCTTTTTATAAAGGAATTTTATTCCGTGAAATTCTTATGGAGCCTAGCTTTTTCTTATTTAAAATGCTATACGGGCTGATATATAAAATAAACATTAAAAAAAATACTGCAGTGTTTGTTCAACAATTCTGGATGAAAGAAAAATTTATCAAGAAATATTCTATAAATAACATCATTGTCAGTCGGCCAGAAATTAAATTATCTGATAAAAGCCAACTTACTGATGATGATTCTCAATTTAAGAATAACCCTTCTGAGTTGACAATATTTTACCCTGCTGTTCCACGAGTATTTAAAAATTACGAGCTTATTATTAGTGCAGCAAGGAAATTGAAAGAACAATCCAATATTAAATTTCTGCTTACTATCAGTGGTACAGAAAATGCGTATGCAAAATATATTATCAGTCTTGCAGAAGGACTGGATAATGTTCATTTCCTCGGGTACTTGGATAAAGAAAAAATCGATCATTGTTATAATATTTCAGATATAGTTTGTTTTCCCTCTAGGTTAGAAACATGGGGATTGCCGTTGTCTGAAGCTAAAGAGCGAGGTAAGTGGGTATTAGCATCAGATTTCCCATTTACTAGAGAAACTCTTGGTAGTTATGAAAAGAAAGCTTTTTTTGATTCTAATAACGATGACATGTTAGTTAAACTTATTATTGACTTCAAAAAAGGTAACCTCAAAAAAGATATCTCTGATGCAAATTTCATTTATCGTAATGAAAATGTATTAGTTGGGTTTGATGAACTAGTTAATTTTATTACTGAAGAACATTGA", - "dna_sequence_length": 1119, - "functions": [ - "lipopolysaccharide biosynthesis protein" - ], - "id": "CDS_2017", - "location": [ - [ - "NC_000913", - 2104509, - "-", - 1119 - ] - ], - "md5": "3082bda545ea69b04de526df8470d2cb", - "parent_gene": "", - "protein_md5": "2510d5f4c945710cbff81f7bd48e9e41", - "protein_translation": "MGKSIVVVSAVNFTTGGPFTILKKFLAATNNKENVSFIALVHSAKELKESYPWVKFIEFPEVKGSWLKRLHFEYVVCKKLSKELNATHWICLHDITANVVTKKRYVYCHNPAPFYKGILFREILMEPSFFLFKMLYGLIYKINIKKNTAVFVQQFWMKEKFIKKYSINNIIVSRPEIKLSDKSQLTDDDSQFKNNPSELTIFYPAVPRVFKNYELIISAARKLKEQSNIKFLLTISGTENAYAKYIISLAEGLDNVHFLGYLDKEKIDHCYNISDIVCFPSRLETWGLPLSEAKERGKWVLASDFPFTRETLGSYEKKAFFDSNNDDMLVKLIIDFKKGNLKKDISDANFIYRNENVLVGFDELVNFITEEH", - "protein_translation_length": 372, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946556" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37750" - ], - [ - "gene_synonym", - "yefH" - ], - [ - "gene_synonym", - "GI:16129973" - ], - [ - "gene_synonym", - "wbbJ" - ], - [ - "gene_synonym", - "NP_416537.1" - ], - [ - "gene_synonym", - "JW2018" - ], - [ - "gene_synonym", - "ECK2027" - ], - [ - "gene_synonym", - "b2033" - ], - [ - "gene_synonym", - "ASAP:ABE-0006749" - ], - [ - "gene_synonym", - "EcoGene:EG11984" - ] - ], - "dna_sequence": "ATGATCTTAAAACTCGCTAAACGATATGGTCTCTGTGGTTTTATTCGGCTTGTTAGAGATGTCTTATTGACTCGTGTATTTTACCGGAACTGTAGAATTATTCGATTTCCCTGCTATATTCGCAATGATGGTAGCATTAATTTTGGTGAAAATTTCACAAGTGGAGTCGGTCTCAGGCTGGATGCATTTGGACGTGGCGTGATTTTTTTTTCCGATAATGTGCAAGTTAACGACTATGTTCATATCGCCTCAATTGAGAGCGTTACGATAGGTCGGGATACGCTTATTGCAAGTAAAGTATTTATTACCGATCATAATCACGGTTCCTTTAAGCACTCTGATCCAATGAGTTCGCCAAATATACCTCCAGACATGCGCACGTTGGAATCTTCAGCTGTTGTAATTGGCCAGAGGGTTTGGTTGGGTGAGAATGTGACGGTTTTGCCTGGAACAATTATTGGTAATGGAGTCGTAGTCGGCGCCAATTCTGTTGTTAGAGGTTCTATTCCCGAAAATACTGTCATTGCGGGAGTACCAGCAAAAATCATAAAGAAATACAATCATGAGACCAAATTATGGGAAAAAGCATAG", - "dna_sequence_length": 591, - "functions": [ - "putative lipopolysaccharide biosynthesis O-acetyl transferase" - ], - "id": "CDS_2018", - "location": [ - [ - "NC_000913", - 2105084, - "-", - 591 - ] - ], - "md5": "5036b511c98127ddb9deb69576a6faa4", - "parent_gene": "", - "protein_md5": "a3cf80b1a96f40737bdf834c2afbe003", - "protein_translation": "MILKLAKRYGLCGFIRLVRDVLLTRVFYRNCRIIRFPCYIRNDGSINFGENFTSGVGLRLDAFGRGVIFFSDNVQVNDYVHIASIESVTIGRDTLIASKVFITDHNHGSFKHSDPMSSPNIPPDMRTLESSAVVIGQRVWLGENVTVLPGTIIGNGVVVGANSVVRGSIPENTVIAGVPAKIIKKYNHETKLWEKA", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2028" - ], - [ - "gene_synonym", - "NP_416538.1" - ], - [ - "gene_synonym", - "yefG" - ], - [ - "gene_synonym", - "wbbI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37749" - ], - [ - "gene_synonym", - "GI:16129974" - ], - [ - "gene_synonym", - "JW2019" - ], - [ - "gene_synonym", - "b2034" - ], - [ - "gene_synonym", - "EcoGene:EG11983" - ], - [ - "gene_synonym", - "GeneID:947041" - ], - [ - "gene_synonym", - "ASAP:ABE-0006751" - ] - ], - "dna_sequence": "ATGTATTTTTTGAATGATTTAAATTTCTCTAGACGCGATGCTGGATTTAAAGCAAGAAAAGATGCACTGGACATTGCTTCAGATTATGAAAACATTTCTGTTGTTAACATTCCTCTATGGGGTGGAGTAGTCCAGAGAATTATTAGTTCTGTTAAGCTTAGTACATTTCTCTGCGGTCTTGAAAATAAAGATGTTTTAATTTTCAATTTCCCGATGGCCAAACCATTTTGGCATATATTGTCATTCTTTCACCGCCTTCTAAAATTTAGAATAGTACCTCTGATTCATGATATTGATGAATTAAGAGGAGGAGGGGGTAGTGATTCTGTGCGGCTTGCTACCTGTGATATGGTCATAAGTCACAATCCACAAATGACAAAGTACCTTAGTAAATATATGTCTCAGGATAAAATCAAAGACATAAAAATATTTGATTACCTCGTCTCATCTGATGTGGAGCATCGAGATGTTACGGATAAGCAACGAGGGGTCATATATGCTGGCAACCTTTCTAGGCATAAATGTTCTTTCATATATACTGAAGGATGCGATTTTACTCTCTTTGGTGTCAACTATGAAAATAAAGATAATCCTAAATATCTTGGAAGTTTTGATGCTCAATCTCCGGAAAAGATTAACCTCCCAGGCATGCAATTTGGACTCATTTGGGATGGAGATTCTGTCGAAACCTGTAGTGGTGCCTTTGGCGACTATTTAAAGTTTAATAACCCTCATAAGACATCTCTTTATCTTTCAATGGAACTTCCAGTATTTATATGGGATAAAGCCGCCCTTGCGGATTTCATTGTAGATAATAGAATAGGATATGCAGTGGGATCAATCAAAGAAATGCAAGAGATTGTTGACTCCATGACAATAGAAACTTATAAGCAAATTAGTGAGAATACAAAAATTATTTCTCAGAAAATTCGAACAGGAAGTTACTTCAGGGATGTTCTTGAAGAGGTGATCGATGATCTTAAAACTCGCTAA", - "dna_sequence_length": 993, - "functions": [ - "d-Galf:alpha-d-Glc beta-1,6-galactofuranosyltransferase" - ], - "id": "CDS_2019", - "location": [ - [ - "NC_000913", - 2106057, - "-", - 993 - ] - ], - "md5": "b9eb0e063a896d6c7066778c0a373c3b", - "parent_gene": "", - "protein_md5": "a7856af340583419477f2ba362e07f5d", - "protein_translation": "MYFLNDLNFSRRDAGFKARKDALDIASDYENISVVNIPLWGGVVQRIISSVKLSTFLCGLENKDVLIFNFPMAKPFWHILSFFHRLLKFRIVPLIHDIDELRGGGGSDSVRLATCDMVISHNPQMTKYLSKYMSQDKIKDIKIFDYLVSSDVEHRDVTDKQRGVIYAGNLSRHKCSFIYTEGCDFTLFGVNYENKDNPKYLGSFDAQSPEKINLPGMQFGLIWDGDSVETCSGAFGDYLKFNNPHKTSLYLSMELPVFIWDKAALADFIVDNRIGYAVGSIKEMQEIVDSMTIETYKQISENTKIISQKIRTGSYFRDVLEEVIDDLKTR", - "protein_translation_length": 330, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2029" - ], - [ - "gene_synonym", - "NP_416539.1" - ], - [ - "gene_synonym", - "yefF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37748" - ], - [ - "gene_synonym", - "wbbH" - ], - [ - "gene_synonym", - "GI:16129975" - ], - [ - "gene_synonym", - "JW2020" - ], - [ - "gene_synonym", - "rfc" - ], - [ - "gene_synonym", - "EcoGene:EG11982" - ], - [ - "gene_synonym", - "b2035" - ], - [ - "gene_synonym", - "GeneID:945179" - ], - [ - "gene_synonym", - "ASAP:ABE-0006753" - ] - ], - "dna_sequence": "ATGATCTATCTTGTAATTAGTGTCTTTCTCATTACAGCATTTATCTGTTTATATCTTAAGAAGGATATATTTTATCCAGCCGTATGCGTTAATATCATCTTCGCACTGGTCTTATTGGGATATGAAATAACGTCAGATATATATGCTTTTCAGTTAAATGACGCTACGTTGATTTTTCTACTTTGCAATGTTTTGACATTTACCCTGTCATGTTTATTGACGGAAAGTGTATTAGATCTAAATATCAGAAAAGTCAATAATGCTATTTATAGCATACCATCGAAGAAAGTGCATAATGTAGGCTTGTTAGTTATTTCTTTTTCGATGATATATATATGCATGAGGTTAAGTAACTACCAGTTCGGGACTAGCTTACTTAGCTATATGAATTTGATAAGAGATGCTGATGTTGAAGACACATCAAGAAATTTCTCAGCATACATGCAGCCAATCATTCTAACTACTTTTGCTTTATTTATTTGGTCTAAAAAATTTACTAATACAAAGGTAAGTAAAACATTTACTTTACTTGTTTTTATTGTATTCATCTTTGCAATTATACTGAATACTGGTAAGCAAATTGTCTTTATGGTTATCATCTCTTATGCATTCATCGTAGGTGTTAATAGAGTAAAACATTATGTTTATCTTATTACAGCTGTAGGTGTTCTATTCTCCTTGTATATGCTCTTTTTACGTGGACTGCCTGGGGGGATGGCATATTATCTATCCATGTATTTGGTCAGCCCTATAATCGCGTTTCAGGAGTTTTATTTTCAGCAAGTATCTAACTCTGCCAGTTCTCATGTCTTTTGGTTTTTTGAAAGGCTGATGGGGCTATTAACAGGTGGAGTCTCTATGTCGTTGCATAAAGAATTTGTGTGGGTGGGTTTGCCAACAAATGTTTATACTGCTTTTTCGGATTATGTTTATATTTCCGCGGAGCTAAGCTATTTGATGATGGTTATTCATGGCTGTATTTCAGGTGTTTTATGGAGATTGTCTCGAAATTACATATCTGTGAAAATATTTTATTCATATTTTATTTATACCTTTTCTTTCATTTTTTATCATGAAAGCTTCATGACTAATATTAGCAGTTGGATACAAATAACTCTTTGTATCATAGTATTCTCTCAATTTCTTAAGGCCCAGAAAATAAAGTGA", 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- [ - "gene_synonym", - "JW2021" - ], - [ - "gene_synonym", - "glf" - ], - [ - "gene_synonym", - "b2036" - ], - [ - "gene_synonym", - "GeneID:945235" - ], - [ - "gene_synonym", - "EcoGene:EG11981" - ], - [ - "gene_synonym", - "ASAP:ABE-0006755" - ] - ], - "dna_sequence": "ATGTACGATTATATCATTGTTGGTTCTGGTTTGTTTGGTGCCGTTTGTGCGAATGAGTTAAAAAAGCTAAACAAAAAAGTTTTAGTGATTGAGAAAAGAAATCATATCGGTGGAAATGCGTACACAGAGGACTGTGAGGGTATCCAGATTCATAAATATGGTGCACATATTTTTCATACCAATGATAAATATATATGGGATTACGTTAATGATTTAGTAGAATTTAATCGTTTTACTAATTCTCCACTGGCGATTTATAAAGACAAATTATTCAACCTTCCTTTTAATATGAATACTTTCCACCAAATGTGGGGAGTTAAAGATCCTCAAGAAGCTCAAAATATCATTAATGCTCAGAAAAAAAAGTATGGTGACAAGGTACCTGAAAATTTGGAGGAGCAGGCGATTTCATTAGTTGGGGAGGACTTATACCAAGCATTGATAAAGGGTTATACGGAGAAGCAGTGGGGAAGAAGTGCAAAAGAATTGCCTGCATTTATTATTAAGCGAATCCCAGTGAGATTTACGTTTGATAACAATTATTTTTCCGATCGCTATCAAGGTATTCCGGTGGGAGGCTACACTAAGCTTATTGAAAAAATGCTTGAAGGTGTGGACGTAAAATTAGGCATTGATTTTTTGAAAGACAAAGATTCTCTAGCGAGTAAAGCCCATAGAATCATCTACACTGGACCCATTGATCAGTACTTCGACTATAGGTTTGGAGCGTTAGAATATCGCTCTTTAAAATTTGAGACGGAACGCCATGAATTTCCAAACTTCCAAGGGAATGCAGTAATAAATTTCACTGATGCTAATGTACCATATACCAGAATAATTGAGCATAAACATTTTGACTATGTTGAGACAAAGCATACGGTTGTTACAAAAGAATATCCATTAGAGTGGAAAGTTGGCGACGAACCCTACTATCCAGTTAATGATAATAAAAACATGGAGCTTTTTAAGAAATATAGAGAGTTAGCTAGCAGAGAAGACAAGGTTATATTTGGCGGGCGTTTGGCCGAGTATAAATATTATGATATGCATCAAGTGATATCTGCCGCTCTTTATCAAGTGAAAAATATAATGAGTACGGATTAA", 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"gene_synonym", - "JW2022" - ], - [ - "gene_synonym", - "ASAP:ABE-0006757" - ], - [ - "gene_synonym", - "GI:16129977" - ], - [ - "gene_synonym", - "b2037" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37746" - ], - [ - "gene_synonym", - "rfbX" - ], - [ - "gene_synonym", - "EcoGene:EG11980" - ] - ], - "dna_sequence": "ATGAATACGAATAAATTATCTTTAAGAAGAAACGTTATATATCTGGCTGTCGTTCAAGGTAGCAATTATCTTTTACCATTGCTTACATTTCCATATCTTGTAAGAACACTTGGTCCTGAAAATTTCGGTATATTCGGTTTTTGCCAAGCGACTATGCTATATATGATAATGTTTGTTGAATATGGTTTCAATCTCACAGCAACTCAGAGTATTGCCAAAGCAGCAGATAGTAAAGATAAAGTAACGTCTATTTTTTGGGCGGTGATATTTTCAAAAATAGTTCTTATCGTCATTACATTGATTTTCTTAACGTCGATGACCTTGCTTGTTCCTGAATATAACAAGCATGCCGTAATTATATGGTCGTTTGTTCCTGCATTAGTCGGGAATTTAATCTACCCTATCTGGCTGTTTCAGGGAAAAGAAAAAATGAAATGGCTGACTTTAAGTAGTATTTTATCCCGCTTGGCTATTATCCCTCTAACATTTATTTTTGTGAACACAAAGTCAGATATAGCAATTGCCGGTTTTATTCAGTCAAGTGCAAATCTGGTTGCTGGAATTATTGCACTAGCTATCGTTGTTCATGAAGGTTGGATTGGTAAAGTTACGCTATCATTACATAATGTGCGTCGATCTTTAGCAGACGGTTTTCATGTTTTTATTTCCACATCTGCTATTAGTTTATATTCTACGGGAATAGTTATTATCCTGGGATTTATATCTGGACCAACGTCCGTAGGGAATTTTAATGCGGCCAATACTATAAGAAACGCGCTTCAAGGGCTATTAAATCCTATCACCCAAGCAATATACCCAAGAATATCAAGTACGCTTGTTCTTAATCGTGTGAAGGGTGTGATTTTAATTAAAAAATCATTGACCTGCTTGAGTTTGATTGGTGGTGCTTTTTCATTAATTCTGCTCTTGGGTGCATCTATACTAGTAAAAATAAGTATAGGGCCGGGATATGATAATGCAGTGATTGTGCTAATGATTATATCGCCTCTGCCTTTTCTTATTTCATTAAGTAATGTCTATGGCATTCAAGTTATGCTGACCCATAATTATAAGAAAGAATTCAGTAAGATTTTAATCGCTGCGGGTTTGTTGAGTTTGTTGTTGATTTTTCCGCTAACAACTCTTTTTAAAGAGATTGGTGCAGCAATAACATTGCTTGCAACAGAGTGCTTAGTTACGTCACTCATGCTGATGTTCGTAAGAAATAATAAATTACTGGTTTGCTGA", - "dna_sequence_length": 1248, - "functions": [ - "putative polisoprenol-linked O-antigen transporter" - ], - "id": "CDS_2022", - "location": [ - [ - "NC_000913", - 2109584, - "-", - 1248 - ] - ], - "md5": "7347e189fd3302a6259522ad99e3b765", - "parent_gene": "", - "protein_md5": "78a7a798f8564db9cf1252961b3f57fd", - "protein_translation": "MNTNKLSLRRNVIYLAVVQGSNYLLPLLTFPYLVRTLGPENFGIFGFCQATMLYMIMFVEYGFNLTATQSIAKAADSKDKVTSIFWAVIFSKIVLIVITLIFLTSMTLLVPEYNKHAVIIWSFVPALVGNLIYPIWLFQGKEKMKWLTLSSILSRLAIIPLTFIFVNTKSDIAIAGFIQSSANLVAGIIALAIVVHEGWIGKVTLSLHNVRRSLADGFHVFISTSAISLYSTGIVIILGFISGPTSVGNFNAANTIRNALQGLLNPITQAIYPRISSTLVLNRVKGVILIKKSLTCLSLIGGAFSLILLLGASILVKISIGPGYDNAVIVLMIISPLPFLISLSNVYGIQVMLTHNYKKEFSKILIAAGLLSLLLIFPLTTLFKEIGAAITLLATECLVTSLMLMFVRNNKLLVC", - "protein_translation_length": 415, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37745" - ], - [ - "gene_synonym", - "GI:16129978" - ], - [ - "gene_synonym", - "NP_416542.1" - ], - [ - "gene_synonym", - "ECK2032" - ], - [ - "gene_synonym", - "JW2023" - ], - [ - "gene_synonym", - "EcoGene:EG11979" - ], - [ - "gene_synonym", - "rmlC" - ], - [ - "gene_synonym", - "rfbC" - ], - [ - "gene_synonym", - "ASAP:ABE-0006759" - ], - [ - "gene_synonym", - "rfbD" - ], - [ - "gene_synonym", - "GeneID:947482" - ], - [ - "gene_synonym", - "b2038" - ] - ], - "dna_sequence": "ATGAATGTGATTAGAACTGAAATTGAAGATGTGCTAATTCTGGAGCCAAGAGTATTTGGTGATGATAGAGGTTTCTTTTATGAGAGCTTTAATCAATCAGCATTTGAACATATTCTAGGCTATCCGGTCAGCTTTGTTCAAGACAATCACTCACGTTCATCAAAAAATGTACTCAGAGGCCTTCACTTTCAACGCGGCGAGTACGCACAAGATAAACTTGTACGCTGCACTCATGGAGCAGTTTTTGATGTTGCTGTTGATATTCGACCCAATTCGGTATCCTTTGGTAAATGGGTTGGTGTTCTGCTTTCAGCTGATAATAAGCAGCAGTTGTGGATACCAAAAGGGTTTGCTCATGGCTTTTTGGTTCTGTCTGATATCGCTGAATTTCAATATAAAACTACAAACTATTATCATCCTGAAAGCGATTGTGGAATATGTTGGAATGATGAACGCATTGCAATTGATTGGCCCCAAACATCAGGGTTAATCCTTTCGCCAAAAGATGAAAGGCTCTTTACGTTAGATGAGCTTATCAGATTAAAATTAATTGCATGA", - "dna_sequence_length": 558, - "functions": [ - "dTDP-4-deoxyrhamnose-3,5-epimerase" - ], - "id": "CDS_2023", - "location": [ - [ - "NC_000913", - 2110138, - "-", - 558 - ] - ], - "md5": "5c6f5c1b1745c578189a173a3b07c4e2", - "parent_gene": "", - "protein_md5": "9bf85933bdf484f6262ba039af857a65", - "protein_translation": "MNVIRTEIEDVLILEPRVFGDDRGFFYESFNQSAFEHILGYPVSFVQDNHSRSSKNVLRGLHFQRGEYAQDKLVRCTHGAVFDVAVDIRPNSVSFGKWVGVLLSADNKQQLWIPKGFAHGFLVLSDIAEFQYKTTNYYHPESDCGICWNDERIAIDWPQTSGLILSPKDERLFTLDELIRLKLIA", - "protein_translation_length": 185, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37744" - ], - [ - "gene_synonym", - "GeneID:945154" - ], - [ - "gene_synonym", - "GI:16129979" - ], - [ - "gene_synonym", - "ECK2033" - ], - [ - "gene_synonym", - "JW2024" - ], - [ - "gene_synonym", - "som" - ], - [ - "gene_synonym", - "EcoGene:EG11978" - ], - [ - "gene_synonym", - "rmlA" - ], - [ - "gene_synonym", - "rfbA" - ], - [ - "gene_synonym", - "NP_416543.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006762" - ], - [ - "gene_synonym", - "b2039" - ] - ], - "dna_sequence": "ATGAAAATGCGTAAAGGTATTATTTTAGCGGGTGGTTCTGGTACACGTCTTTATCCTGTGACTATGGCTGTCAGTAAACAGCTATTACCTATTTATGATAAACCGATGATCTATTACCCGCTCTCTACACTGATGTTGGCGGGTATTCGCGATATTTTGATTATCAGTACACCTCAGGATACTCCTCGTTTTCAACAATTGCTGGGTGACGGTAGCCAGTGGGGCCTGAATCTTCAGTACAAAGTGCAACCTAGCCCAGATGGCCTCGCGCAGGCATTTATCATCGGTGAAGAGTTTATTGGTGGTGATGATTGTGCTTTGGTTCTTGGTGATAATATCTTTTACGGTCACGATCTGCCGAAGCTAATGGAGGCCGCTGTTAACAAAGAAAGTGGTGCAACGGTATTTGCCTATCACGTTAATGATCCAGAACGCTATGGTGTCGTTGAGTTTGATAAAAACGGTACGGCAATCAGTCTGGAAGAAAAACCGTTAGAACCAAAGAGTAATTACGCCGTTACAGGTCTGTACTTTTATGATAACGACGTGGTTCAGATGGCGAAAAACTTGAAGCCGTCTGCACGTGGTGAGTTAGAAATTACAGATATTAACCGTATTTATCTTGAGCAGGGACGTCTGTCTGTCGCGATGATGGGGCGTGGCTACGCGTGGCTGGACACGGGGACTCATCAGAGTCTGATAGAAGCAAGTAATTTTATTGCGACAATTGAAGAGCGCCAGGGATTGAAGGTTTCCTGTCCTGAAGAGATTGCATTTCGTAAAGGTTTTATTGATGTTGAGCAAGTAAGAAAATTAGCTGTACCACTAATAAAGAATAATTATGGGCAGTATCTTTATAAAATGACGAAGGATTCAAATTAA", - "dna_sequence_length": 882, - "functions": [ - "glucose-1-phosphate thymidylyltransferase" - ], - "id": "CDS_2024", - "location": [ - [ - "NC_000913", - 2111019, - "-", - 882 - ] - ], - "md5": "3c5263cc22009577a279292ecf0f099f", - "parent_gene": "", - "protein_md5": "124980151a79fe5390609902d6bab740", - "protein_translation": "MKMRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEFIGGDDCALVLGDNIFYGHDLPKLMEAAVNKESGATVFAYHVNDPERYGVVEFDKNGTAISLEEKPLEPKSNYAVTGLYFYDNDVVQMAKNLKPSARGELEITDINRIYLEQGRLSVAMMGRGYAWLDTGTHQSLIEASNFIATIEERQGLKVSCPEEIAFRKGFIDVEQVRKLAVPLIKNNYGQYLYKMTKDSN", - "protein_translation_length": 293, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947117" - ], - [ - "gene_synonym", - "GI:16129980" - ], - [ - "gene_synonym", - "b2040" - ], - [ - "gene_synonym", - "NP_416544.1" - ], - [ - "gene_synonym", - "EcoGene:EG12411" - ], - [ - "gene_synonym", - "JW2025" - ], - [ - "gene_synonym", - "ECK2034" - ], - [ - "gene_synonym", - "ASAP:ABE-0006764" - ], - [ - "gene_synonym", - "rfbD" - ], - [ - "gene_synonym", - "rmlD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37760" - ] - ], - "dna_sequence": "ATGAATATCCTCCTTTTTGGCAAAACAGGGCAGGTAGGTTGGGAACTACAGCGTGCTCTGGCACCTTTGGGTAATTTGATTGCTTTTGATGTTCACTCTACTGATTATTGCGGTGATTTTAGTAATCCTGAAGGTGTAGCTGAAACCGTAAGAAGCATTCGGCCGGATATTATTGTCAATGCAGCCGCTCACACCGCAGTAGACAAAGCAGAATCAGAACCGGAGTTTGCACAATTAATTAACGCAACAAGTGTCGAAGCGATTGCGAAAGCAGCAAATGAAGTTGGAGCCTGGGTTATCCATTACTCGACTGATTACGTCTTCCCTGGAAATGGCGATATGCCATGGCTGGAGACGGATGCAACCGCACCACTAAATGTTTACGGTGAAACCAAGTTAGCCGGAGAAAAAGCGTTACAGGAATATTGCGCGAAGCATCTTATTTTCCGGACCAGCTGGGTCTATGCAGGAAAAGGAAATAACTTCGCCAAAACGATGTTACGTCTGGCAAAAGAGCGTGAAGAATTAGCGGTTATTAACGATCAGTTTGGTGCGCCAACAGGTGCTGAACTGCTGGCTGATTGTACAGCACATGCCATTCGTGTCGCACTGAATAAACCGGATGTCGCAGGCTTGTACCATTTGGTAGCCAGTGGTACCACAACCTGGTACGATTATGCTGCGCTGGTTTTTGAAGAGGCGCGCAAAGCAGGCATTCCCCTTGCACTCAACAAGCTCAACGCAGTACCAACAACAGCCTATCCTACACCAGCTCGTCGTCCACATAACTCTCGCCTTAATACAGAAAAATTTCAGCAGAACTTTGCGCTTGTCTTGCCTGACTGGCAGGTTGGCGTGAAACGAATGCTCAATGAATTATTTACGACTACAGCAATTTAA", - "dna_sequence_length": 900, - "functions": [ - "dTDP-L-rhamnose synthase, NAD(P)-dependent dTDP-4-dehydrorhamnose reductase subunit" - ], - "id": "CDS_2025", - "location": [ - [ - "NC_000913", - 2111976, - "-", - 900 - ] - ], - "md5": "2aa00a8285f1043789628e576ebb8721", - "parent_gene": "", - "protein_md5": "f1778da0779cf0a6e7618d0f864a75d5", - "protein_translation": "MNILLFGKTGQVGWELQRALAPLGNLIAFDVHSTDYCGDFSNPEGVAETVRSIRPDIIVNAAAHTAVDKAESEPEFAQLINATSVEAIAKAANEVGAWVIHYSTDYVFPGNGDMPWLETDATAPLNVYGETKLAGEKALQEYCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVALNKPDVAGLYHLVASGTTTWYDYAALVFEEARKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNELFTTTAI", - "protein_translation_length": 299, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129981" - ], - [ - "gene_synonym", - "b2041" - ], - [ - "gene_synonym", - "ASAP:ABE-0006766" - ], - [ - "gene_synonym", - "JW2026" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37759" - ], - [ - "gene_synonym", - "EcoGene:EG12412" - ], - [ - "gene_synonym", - "som" - ], - [ - "gene_synonym", - "ECK2035" - ], - [ - "gene_synonym", - "rfbB" - ], - [ - "gene_synonym", - "rmlB" - ], - [ - "gene_synonym", - "GeneID:945276" - ], - [ - "gene_synonym", - "NP_416545.1" - ] - ], - "dna_sequence": "GTGAAAATACTTGTTACTGGTGGCGCAGGATTTATTGGTTCAGCTGTAGTTCGTCACATTATAAATAATACGCAGGATAGTGTTGTTAATGTCGATAAATTAACGTACGCCGGAAACCGGGAATCACTTGCTGATGTTTCTGATTCTGAACGCTATGTTTTTGAACATGCGGATATTTGCGATGCACCTGCAATGGCACGGATTTTTGCTCAGCATCAGCCGGATGCAGTGATGCACCTGGCTGCTGAAAGCCATGTTGACCGTTCAATTACAGGCCCTGCGGCATTTATTGAAACCAATATTGTTGGTACTTATGTCCTTTTGGAAGCCGCTCGCAATTACTGGTCTGCTCTTGATAGCGACAAGAAAAATAGCTTCCGTTTTCATCATATTTCTACTGACGAAGTCTATGGTGATTTGCCTCATCCAGATGAAGTAAATAATACAGAAGAATTACCCTTATTTACTGAGACGACAGCTTACGCGCCAAGCAGCCCTTATTCCGCATCCAAAGCATCCAGCGATCATTTAGTCCGCGCGTGGAAACGTACATATGGTTTACCGACAATTGTGACTAATTGCTCGAACAACTATGGTCCTTATCATTTCCCGGAAAAGCTTATTCCACTGGTTATTCTTAATGCACTGGAAGGTAAGGCATTACCTATTTATGGCAAAGGAGATCAGATCCGCGACTGGTTGTATGTTGAAGATCATGCGCGTGCGTTATATACCGTCGTAACCGAAGGTAAAGCGGGTGAAACTTATAACATTGGTGGGCACAACGAAAAGAAAAACATCGATGTAGTGCTCACTATTTGTGATTTGCTGGATGAGATTGTACCGAAAGAGAAATCTTATCGTGAGCAAATCACTTATGTTGCTGATCGTCCGGGACACGATCGCCGCTATGCTATTGATGCTGAGAAGATTGGTCGCGCATTGGGATGGAAACCACAGGAAACGTTTGAGAGCGGGATTCGTAAAACGGTGGAATGGTACCTGTCCAATACAAAATGGGTTGATAATGTGAAAAGTGGTGCCTATCAATCGTGGATTGAACAGAACTATGAGGGCCGCCAGTAA", - "dna_sequence_length": 1086, - "functions": [ - "dTDP-glucose 4,6 dehydratase, NAD(P)-binding" - ], - "id": "CDS_2026", - "location": [ - [ - "NC_000913", - 2113061, - "-", - 1086 - ] - ], - "md5": "78c04d0de69c33a17dd346d1210ea7a1", - "parent_gene": "", - "protein_md5": "1405208aed5cd6f9b3443b549f31dbc1", - "protein_translation": "MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNRESLADVSDSERYVFEHADICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKIGRALGWKPQETFESGIRKTVEWYLSNTKWVDNVKSGAYQSWIEQNYEGRQ", - "protein_translation_length": 361, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129982" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAB6" - ], - [ - "gene_synonym", - "b2042" - ], - [ - "gene_synonym", - "JW2027" - ], - [ - "gene_synonym", - "ECK2036" - ], - [ - "gene_synonym", - "GeneID:946560" - ], - [ - "gene_synonym", - "EcoGene:EG13578" - ], - [ - "gene_synonym", - "galF" - ], - [ - "gene_synonym", - "wcaN" - ], - [ - "gene_synonym", - "NP_416546.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006771" - ] - ], - "dna_sequence": "ATGACGAATTTAAAAGCAGTTATTCCTGTAGCGGGTCTCGGGATGCATATGTTGCCTGCCACTAAGGCGATACCCAAAGAGATGCTACCAATCGTCGACAAGCCAATGATTCAGTACATTGTTGACGAGATTGTGGCTGCAGGGATCAAAGAAATCCTCCTGGTAACTCACGCGTCCAAGAACGCGGTCGAAAACCACTTCGACACCTCTTATGAGTTAGAATCACTCCTTGAGCAGCGCGTGAAGCGTCAACTGCTGGCGGAAGTACAGTCCATCTGTCCGCCGGGCGTGACCATTATGAACGTGCGTCAGGGCGAACCTTTAGGTTTAGGCCACTCCATTTTGTGTGCGCGACCTGCCATTGGTGACAACCCATTTGTCGTGGTACTGCCAGACGTTGTGATCGACGATGCCAGCGCCGACCCGCTACGTTACAACCTTGCTGCCATGATTGCACGTTTCAACGAAACGGGCCGCAGCCAGGTGCTGGCAAAACGTATGCCGGGTGACCTCTCTGAATACTCCGTCATCCAGACTAAAGAGCCGCTGGACCGTGAGGGTAAAGTCAGCCGCATTGTTGAATTTATCGAAAAACCGGATCAGCCGCAGACGCTGGACTCAGACATCATGGCCGTAGGTCGCTATGTGCTTTCTGCCGATATTTGGCCGGAACTGGAACGTACTCAGCCTGGTGCATGGGGACGTATTCAGCTGACTGATGCTATTGCCGAGCTGGCGAAAAAACAATCCGTTGATGCAATGCTGATGACCGGCGACAGTTACGACTGCGGCAAAAAAATGGGCTATATGCAGGCGTTTGTGAAGTATGGCCTACGCAACCTGAAAGAAGGGGCGAAGTTCCGTAAAGGTATTGAGAAGCTGTTAAGCGAATAA", - "dna_sequence_length": 894, - "functions": [ - "putative regulatory subunit for GalU" - ], - "id": "CDS_2027", - "location": [ - [ - "NC_000913", - 2114327, - "-", - 894 - ] - ], - "md5": "fb623c2aba06743e53f21e3d2bbf12ff", - "parent_gene": "", - "protein_md5": "82b18d472babf79a0c6f7c73093e156d", - "protein_translation": "MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNVRQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRSQVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLSADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKYGLRNLKEGAKFRKGIEKLLSE", - "protein_translation_length": 297, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129983" - ], - [ - "gene_synonym", - "ASAP:ABE-0006774" - ], - [ - "gene_synonym", - "b2043" - ], - [ - "gene_synonym", - "JW2028" - ], - [ - "gene_synonym", - "NP_416547.1" - ], - [ - "gene_synonym", - "GeneID:946561" - ], - [ - "gene_synonym", - "EcoGene:EG12651" - ], - [ - "gene_synonym", - "yefK" - ], - [ - "gene_synonym", - "ECK2037" - ], - [ - "gene_synonym", - "wcaM" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P71244" - ] - ], - "dna_sequence": "ATGCCATTTAAAAAACTCTCCCGACGCACGTTCCTGACGGCAAGCTCGGCGCTTGCCTTCCTCCATACCCCTTTCGCCCGCGCGCTTCCCGCCCGACAAAGCGTTAACATTAACGACTACAACCCACACGACTGGATCGCCTCATTTAAACAAGCCTTCAGCGAAGGGCAAACAGTCGTCGTGCCTGCCGGATTGGTTTGTGACAATATCAACACCGGCATCTTTATCCCTCCCGGTAAAACGTTACACATTCTTGGAAGCTTGCGCGGCAACGGCAGAGGGCGATTTGTCTTACAGGACGGCAGCCAGGTGACAGGGGAGGATGGCGGCAGTATGCATAACATCACCCTGGATGTGCGTGGTTCTGACTGCACCATCAAAGGGCTGACTATGAGCGGCTTTGGCCCGGTGACGCAGATTTATATCGGCGGCAAAAACAAACGGGTCATGCGCAACCTGATCATCGATAACCTGACCGTTAGCCACGCTAATTACGCCATCTTACGCCAGGGATTTCATAACCAGATTATCGGTGCCAACATCACCAATTGTAAGTTCAGCGACTTACAAGGCGACGCCATTGAATGGAACGTGGCAATTAACGACCGTGATATTTTGATATCTGACCATGTCATCGAGCGCATCAACTGTACCAACGGCAAAATCAACTGGGGCATCGGCATAGGCCTTGCGGGAAGCACTTATGATAACAACTACCCGGAAGACCAGGCAGTGAAAAACTTTGTCGTGGCGAATATCACGGGATCGGATTGTCGGCAGTTGATACATGTTGAAAATGGTAAACATTTTGTTATTCGTAATATCAAAGCCCGCAATATCACGCCGGATTTCAGTAAGAAAGCGGGCATTGATAACGCGACAGTCGCTATTTACGGTTGTGACAATTTCGTGATTGATAATATTGAAATGATTAATAGCGCCGGGATGTTAATCGGCTATGGGGTAATTAAAGGCAAATATCTCTCGATACCGCAAAATTTCCGGGTGAATGATATTCAACTGGATAATACTCATCTTGCTTATAAATTGCGCGGCATTCAAATCTCCGCCGGGAATGCTGTTTCCTTTGTGGCGCTAACTAACATTGAGATGAAGCGTGCGTCGCTGGAGTTACACAACAAACCGCAACATTTTTTTATGCGAAATATCAATGTGATGCAGGAATCCTCAGTTGGACCCGCATTGAGCATGAACTTTGACATGCGCAAAGACGTTCGTGGTGTTTTTATGGCGAAAAAAGAAACACTGCTGTCTCTTGCAAATGTTCATGCGGTGAATGAAAAAGGACAAAGCTCCGTCGATATCGACAGGATTAATCACCATATTGTTAATGTGGAGAAGATTAACTTTAGATTGCCGGAACTGAGGGAGTAG", - "dna_sequence_length": 1395, - "functions": [ - "colanic acid biosynthesis protein" - ], - "id": "CDS_2028", - "location": [ - [ - "NC_000913", - 2115896, - "-", - 1395 - ] - ], - "md5": "3c9b92c0eb063e6598c24774170edfe0", - "parent_gene": "", - "protein_md5": "3a654fed508b318c2cd93bd23e93f124", - "protein_translation": "MPFKKLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHDWIASFKQAFSEGQTVVVPAGLVCDNINTGIFIPPGKTLHILGSLRGNGRGRFVLQDGSQVTGEDGGSMHNITLDVRGSDCTIKGLTMSGFGPVTQIYIGGKNKRVMRNLIIDNLTVSHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDRDILISDHVIERINCTNGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIKARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNFRVNDIQLDNTHLAYKLRGIQISAGNAVSFVALTNIEMKRASLELHNKPQHFFMRNINVMQESSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAVNEKGQSSVDIDRINHHIVNVEKINFRLPELRE", - "protein_translation_length": 464, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2044" - ], - [ - "gene_synonym", - "ECK2038" - ], - [ - "gene_synonym", - "JW2029" - ], - [ - "gene_synonym", - "GI:16129984" - ], - [ - "gene_synonym", - "GeneID:946565" - ], - [ - "gene_synonym", - "EcoGene:EG12652" - ], - [ - "gene_synonym", - "yefL" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P71243" - ], - [ - "gene_synonym", - "wcaL" - ], - [ - "gene_synonym", - "ASAP:ABE-0006777" - ], - [ - "gene_synonym", - "NP_416548.1" - ] - ], - "dna_sequence": "ATGAAGGTCGGCTTCTTTTTACTGAAATTCCCGCTGTCGTCAGAAACCTTCGTCCTTAACCAAATTACCGCGTTTATTGATATGGGATTTGAGGTAGAGATTCTCGCGCTGCAAAAAGGCGACACACAAAACACCCACGCGGCATGGACGAAATACAACCTTGCTGCCAGAACCCGCTGGTTACAGGACGAACCTACGGGCAAAGTGGCGAAACTGCGCCACCGAGCCAGCCAGACCTTGCGCGGCATTCATCGTAAAAATACCTGGCAGGCGCTCAACCTCAAACGCTATGGTGCCGAGTCGCGGAACCTGATTTTGTCTGCCATTTGCGGCCAGGTCGCAACACCGTTTCGCGCCGATGTGTTCATCGCTCATTTTGGTCCCGCGGGGGTAACCGCAGCAAAACTCCGCGAACTGGGTGTCATTCGCGGCAAAATTGCCACTATCTTCCACGGTATTGATATCTCCAGTCGGGAAGTGCTCAACCACTACACTCCCGAATATCAGCAACTGTTTCGCCGTGGCGACCTGATGTTACCGATAAGCGATCTGTGGGCCGGAAGGCTGCAAAAAATGGGCTGCCCGAGGGAAAAAATCGCCGTATCGCGCATGGGCGTAGATATGACGCGCTTTAGCCCGCGTCCCGTGAAAGCGCCCGCAACGCCGCTGGAGATTATTTCCGTCGCACGCTTAACCGAGAAAAAAGGCCTGCATGTGGCGATCGAAGCCTGCCGTCAGTTGAAAGAGCAGGGCGTGGCATTTCGCTATCGCATCCTCGGCATTGGCCCGTGGGAAAGACGCCTGCGCACCCTCATCGAACAATATCAACTGGAAGATGTGGTGGAGATGCCGGGCTTTAAACCGAGCCATGAAGTGAAAGCGATGCTCGACGACGCGGATGTCTTCCTGTTGCCATCGGTTACAGGTGCGGATGGTGATATGGAAGGTATTCCGGTGGCGCTAATGGAAGCGATGGCGGTCGGTATTCCGGTGGTTTCTACTCTGCATAGTGGAATACCGGAACTGGTGGAGGCTGACAAATCCGGCTGGCTGGTGCCTGAGAACGATGCTCGCGCACTGGCGCAACGACTGGCGGCGTTTAGCCAACTGGACACCGACGAATTGGCTCCGGTCGTCAAACGCGCGCGCGAAAAAGTTGAACACGATTTTAACCAGCAGGTGATCAATCGAGAACTCGCCAGCTTGCTGCAGGCTTTATAG", - "dna_sequence_length": 1221, - "functions": [ - "putative glycosyl transferase" - ], - "id": "CDS_2029", - "location": [ - [ - "NC_000913", - 2117127, - "-", - 1221 - ] - ], - "md5": "4d208e649a88a779bf0861939768fb7a", - "parent_gene": "", - "protein_md5": "4c6dcdeb48b922405f91072b67dd3ea4", - "protein_translation": "MKVGFFLLKFPLSSETFVLNQITAFIDMGFEVEILALQKGDTQNTHAAWTKYNLAARTRWLQDEPTGKVAKLRHRASQTLRGIHRKNTWQALNLKRYGAESRNLILSAICGQVATPFRADVFIAHFGPAGVTAAKLRELGVIRGKIATIFHGIDISSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQKMGCPREKIAVSRMGVDMTRFSPRPVKAPATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPENDARALAQRLAAFSQLDTDELAPVVKRAREKVEHDFNQQVINRELASLLQAL", - "protein_translation_length": 406, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2045" - ], - [ - "gene_synonym", - "JW2030" - ], - [ - "gene_synonym", - "ECK2039" - ], - [ - "gene_synonym", - "GeneID:946569" - ], - [ - "gene_synonym", - "GI:16129985" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P71242" - ], - [ - "gene_synonym", - "EcoGene:EG13577" - ], - [ - "gene_synonym", - "wcaK" - ], - [ - "gene_synonym", - "ASAP:ABE-0006780" - ], - [ - "gene_synonym", - "NP_416549.1" - ] - ], - "dna_sequence": "ATGAAATTACTTATTCTGGGCAACCACACTTGCGGCAATCGTGGCGACAGCGCCATCCTGCGCGGCTTACTTGATGCCATCAACATTCTCAATCCACACGCCGAAGTGGATGTGATGAGCCGCTATCCGGTCAGTTCTTCCTGGCTGCTCAACCGCCCGGTAATGGGCGATCCGCTGTTCCTGCAAATGAAACAACACAACAGCGCGGCGGGCGTTGTCGGGCGCGTTAAAAAAGTCCTCCGTCGCCGCTACCAGCATCAGGTATTGCTCTCACGCGTCACCGACACTGGCAAGCTGCGCAATATCGCCATCGCCCAGGGATTCACCGACTTCGTGCGCCTGCTGTCAGGTTACGACGCCATTATCCAGGTCGGCGGATCGTTTTTTGTCGATCTCTATGGCGTGCCGCAGTTTGAACATGCACTTTGCACGTTTATGGCGAAAAAGCCGCTGTTTATGATTGGTCACAGTGTTGGCCCGTTCCAGGATGAGCAATTTAACCAACTGGCGAACTACGTTTTTGGTCACTGCGACGCGCTGATCCTGCGCGAATCGGTCAGCTTTGATCTGATGAAACGCAGCAATATCACCACCGCAAAAGTGGAACATGGCGTCGATACCGCGTGGCTGGTCGATCACCACACAGAAGACTTCACCGCCAGCTATGCCGTTCAACACTGGCTGGACGTTGCCGCACAACAGAAAACGGTGGCCATTACCCTGCGCGAACTGGCACCGTTTGACAAACGTCTCGGCACCACTCAACAAGCGTATGAAAAAGCCTTTGCCGGGGTGGTCAATCGCATTCTCGATGAAGGGTATCAGGTGATTGCGCTCTCCACCTGTACGGGCATTGACAGCTATAACAAAGACGACCGCATGGTGGCGCTCAACCTGCGCCAGCACATCAGCGATCCTGCCCGTTACCACGTAGTGATGGATGAACTCAACGATCTGGAAATGGGCAAAATTCTGGGGGCCTGTGAACTCACCGTCGGTACGCGCCTGCACTCTGCCATTATCTCGATGAATTTTGCCACTCCGGCAATTGCCATCAACTACGAACATAAATCCGCCGGGATTATGCAGCAGCTGGGACTACCGGAGATGGCAATTGATATCCGTCATTTATTAGACGGCAGCCTGCAAGCGATGGTTGCGGATACCTTAGGCCAGCTTCCGGCGCTGAATGCGCGACTTAGTGAAGCCGTCAGTCGTGAGCGTCAGACAGGAATGCAGATGGTGCAGTCTGTGCTTGAGCGCATCGGGGAGGTGAAATGA", - "dna_sequence_length": 1281, - "functions": [ - "colanic acid biosynthesis protein" - ], - "id": "CDS_2030", - "location": [ - [ - "NC_000913", - 2118404, - "-", - 1281 - ] - ], - "md5": "3528a2cc1c819924c7a1b3be3ad45674", - "parent_gene": "", - "protein_md5": "dac32997412c94e5ed33df32cc019338", - "protein_translation": "MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPVSSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNIAIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGPFQDEQFNQLANYVFGHCDALILRESVSFDLMKRSNITTAKVEHGVDTAWLVDHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGTRLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLPALNARLSEAVSRERQTGMQMVQSVLERIGEVK", - "protein_translation_length": 426, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2031" - ], - [ - "gene_synonym", - "b2046" - ], - [ - "gene_synonym", - "GI:16129986" - ], - [ - "gene_synonym", - "wzx" - ], - [ - "gene_synonym", - "wzxC" - ], - [ - "gene_synonym", - "ECK2040" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77377" - ], - [ - "gene_synonym", - "GeneID:946581" - ], - [ - "gene_synonym", - "NP_416550.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006783" - ], - [ - "gene_synonym", - "EcoGene:EG13576" - ] - ], - "dna_sequence": "ATGAGCTTACGTGAAAAAACCATCAGCGGCGCGAAGTGGTCGGCGATTGCCACGGTGATCATCATCGGCCTCGGGCTGGTGCAGATGACCGTGCTGGCGCGGATTATCGACAACCACCAGTTCGGCCTGCTTACCGTGTCGCTGGTGATTATCGCGCTGGCAGATACGCTTTCTGACTTCGGTATCGCTAACTCGATTATTCAGCGAAAAGAAATCAGTCACCTTGAACTCACCACGTTGTACTGGCTGAACGTCGGGCTGGGGATCGTGGTGTGCGTGGCGGTGTTTTTGTTGAGTGATCTCATCGGCGACGTGCTGAATAACCCGGACCTGGCACCGTTGATTAAAACATTATCGCTGGCGTTTGTGGTAATCCCCCACGGGCAACAGTTCCGCGCGTTGATGCAAAAAGAGCTGGAGTTCAACAAAATCGGCATGATCGAAACCAGCGCGGTGCTGGCGGGCTTCACTTGTACGGTGGTTAGCGCCCATTTCTGGCCGCTGGCGATGACCGCGATCCTCGGTTATCTGGTCAATAGTGCGGTGAGAACGCTGCTGTTTGGCTACTTTGGCCGCAAAATTTATCGCCCCGGTCTGCATTTCTCGCTGGCGTCGGTGGCACCGAACTTACGCTTTGGTGCCTGGCTGACGGCGGACAGCATCATCAACTATCTCAATACCAACCTTTCAACGCTCGTGCTGGCGCGTATTCTCGGCGCGGGCGTGGCAGGGGGATACAACCTGGCGTACAACGTGGCCGTTGTGCCACCGATGAAGCTGAACCCAATCATCACCCGCGTGTTGTTTCCGGCATTCGCCAAAATTCAGGACGATACCGAAAAGCTGCGTGTTAACTTCTACAAGCTGCTGTCGGTAGTGGGGATTATCAACTTTCCGGCGCTGCTCGGGCTAATGGTGGTGTCGAATAACTTTGTACCGCTGGTCTTTGGTGAGAAGTGGAACAGCATTATTCCGGTGCTGCAATTGCTGTGTGTGGTGGGTCTGCTGCGCTCCGTAGGTAACCCGATTGGTTCGCTGCTGATGGCGAAAGCGCGGGTCGATATCAGCTTTAAATTCAACGTATTCAAAACATTTCTGTTTATTCCGGCGATTGTTATAGGTGGGCAGATGGCGGGCGCGATCGGCGTCACGCTTGGCTTCCTGCTGGTGCAAATTATCAACACCATTCTGAGTTACTTCGTGATGATTAAACCGGTTCTTGGTTCCAGTTATCGCCAGTACATCCTGAGTTTATGGCTGCCGTTTTATCTCTCGCTGCCGACGCTGGTGGTCAGTTATGCGCTGGGCATTGTGCTGAAAGGGCAACTGGCGCTGGGGATGCTGCTGGCGGTGCAAATAGCCACGGGGGTGCTGGCGTTTGTGGTGATGATTGTGCTGTCGCGCCATCCGCTGGTGGTGGAAGTGAAGCGTCAGTTTTGTCGCAGCGAAAAAATGAAAATGCTTTTACGGGCGGGGTGA", - "dna_sequence_length": 1479, - "functions": [ - "putative colanic acid exporter" - ], - "id": "CDS_2031", - "location": [ - [ - "NC_000913", - 2120158, - "-", - 1479 - ] - ], - "md5": "0481bbea428c4b037fd58c1b226ea2d0", - "parent_gene": "", - "protein_md5": "ffa31721c3190d3a7b58a748d24ff227", - "protein_translation": "MSLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLLTVSLVIIALADTLSDFGIANSIIQRKEISHLELTTLYWLNVGLGIVVCVAVFLLSDLIGDVLNNPDLAPLIKTLSLAFVVIPHGQQFRALMQKELEFNKIGMIETSAVLAGFTCTVVSAHFWPLAMTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVAPNLRFGAWLTADSIINYLNTNLSTLVLARILGAGVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQDDTEKLRVNFYKLLSVVGIINFPALLGLMVVSNNFVPLVFGEKWNSIIPVLQLLCVVGLLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAIVIGGQMAGAIGVTLGFLLVQIINTILSYFVMIKPVLGSSYRQYILSLWLPFYLSLPTLVVSYALGIVLKGQLALGMLLAVQIATGVLAFVVMIVLSRHPLVVEVKRQFCRSEKMKMLLRAG", - "protein_translation_length": 492, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2047" - ], - [ - "gene_synonym", - "GI:16129987" - ], - [ - "gene_synonym", - "EcoGene:EG13575" - ], - [ - "gene_synonym", - "JW2032" - ], - [ - "gene_synonym", - "ECK2041" - ], - [ - "gene_synonym", - "NP_416551.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P71241" - ], - [ - "gene_synonym", - "wcaJ" - ], - [ - "gene_synonym", - "GeneID:946583" - ], - [ - "gene_synonym", - "ASAP:ABE-0006785" - ] - ], - "dna_sequence": "ATGACAAATCTAAAAAAGCGCGAGCGAGCGAAAACCAATGCATCGTTAATCTCTATGGTGCAACGCTTTTCAGATATCACCATCATGTTTGCCGGACTATGGCTGGTTTGCGAAGTCAGCGGACTGTCATTCCTCTACATGCACCTGTTGGTGGCGCTGATTACGCTGGTGGTGTTCCAGATGCTGGGCGGCATCACCGATTTTTATCGCTCATGGCGCGGTGTTCGGGCAGCGACAGAATTTGCCCTGTTGCTACAAAACTGGACCTTAAGCGTGATTTTCAGCGCCGGACTGGTGGCGTTCAACAATGATTTCGACACGCAACTGAAAATCTGGCTGGCGTGGTATGCGCTGACCAGCATCGGACTGGTGGTTTGCCGTTCGTGTATTCGCATTGGGGCGGGCTGGCTGCGTAATCATGGCTATAACAAGCGCATGGTCGCGGTGGCGGGGGATTTAGCCGCCGGGCAAATGCTGATGGAGAGCTTCCGTAACCAGCCGTGGTTAGGGTTTGAAGTGGTGGGCGTTTACCACGACCCGAAACCGGGCGGCGTTTCTAACGACTGGGCGGGTAACCTGCAACAGCTGGTCGAGGACGCGAAAGCGGGCAAGATTCATAACGTCTATATCGCGATGCAAATGTGCGACGGCGCGCGAGTGAAAAAACTGGTCCATCAACTGGCGGACACCACCTGTTCGGTGCTGCTGATCCCCGACGTCTTTACCTTCAACATTCTCCATTCACGCCTCGAAGAGATGAACGGCGTACCGGTGGTGCCGCTTTACGACACGCCGCTTTCCGGGGTTAACCGCCTGCTCAAACGTGCGGAAGACATTGTGCTGGCGACGCTTATTCTGCTGCTGATCTCCCCGGTGCTGTGCTGTATTGCGCTGGCGGTGAAACTCAGTTCACCAGGGCCGGTTATTTTCCGCCAGACTCGCTACGGCATGGATGGCAAGCCGATCAAAGTGTGGAAGTTCCGTTCCATGAAAGTGATGGAGAACGACAAAGTGGTGACCCAGGCGACGCAGAACGATCCGCGCGTCACCAAAGTGGGGAACTTTCTGCGCCGTACCTCGCTGGATGAATTGCCGCAGTTTATCAATGTGCTGACCGGGGGGATGTCGATTGTCGGTCCACGTCCGCACGCAGTAGCGCATAACGAACAGTATCGACAGCTCATTGAAGGCTACATGCTGCGCCATAAGGTGAAACCGGGCATTACCGGCTGGGCGCAGATTAACGGCTGGCGCGGCGAAACCGACACGCTGGAGAAAATGGAAAAACGCGTCGAGTTCGACCTTGAGTACATCCGCGAATGGAGCGTCTGGTTCGATATCAAAATCGTTTTCCTGACGGTGTTCAAAGGTTTCGTTAACAAAGCGGCATATTGA", - "dna_sequence_length": 1395, - "functions": [ - "colanic biosynthesis UDP-glucose lipid carrier transferase" - ], - "id": "CDS_2032", - "location": [ - [ - "NC_000913", - 2121554, - "-", - 1395 - ] - ], - "md5": "3abad532de6a823f5ac2aedbdc0677d8", - "parent_gene": "", - "protein_md5": "dcd9c46595faaff45e845431137cdab6", - "protein_translation": "MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSFLYMHLLVALITLVVFQMLGGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFNNDFDTQLKIWLAWYALTSIGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLMESFRNQPWLGFEVVGVYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGARVKKLVHQLADTTCSVLLIPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRAEDIVLATLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVMENDKVVTQATQNDPRVTKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYRQLIEGYMLRHKVKPGITGWAQINGWRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIVFLTVFKGFVNKAAY", - "protein_translation_length": 464, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129988" - ], - [ - "gene_synonym", - "JW2033" - ], - [ - "gene_synonym", - "NP_416552.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24175" - ], - [ - "gene_synonym", - "cpsG" - ], - [ - "gene_synonym", - "ECK2042" - ], - [ - "gene_synonym", - "b2048" - ], - [ - "gene_synonym", - "ASAP:ABE-0006788" - ], - [ - "gene_synonym", - "manB" - ], - [ - "gene_synonym", - "EcoGene:EG10162" - ], - [ - "gene_synonym", - "rfbK" - ], - [ - "gene_synonym", - "GeneID:946574" - ] - ], - "dna_sequence": "ATGAAAAAATTAACCTGCTTTAAAGCCTATGATATTCGCGGGAAATTAGGCGAAGAACTGAATGAAGATATCGCCTGGCGCATTGGTCGCGCCTATGGCGAATTTCTCAAACCGAAAACCATTGTGTTAGGCGGTGATGTCCGCCTCACCAGCGAAACCTTAAAACTGGCGCTGGCGAAAGGTTTACAGGATGCGGGCGTTGACGTGCTGGATATTGGTATGTCCGGCACCGAAGAGATCTATTTCGCCACGTTCCATCTCGGCGTGGATGGCGGCATTGAAGTTACCGCCAGCCATAATCCGATGGATTATAACGGCATGAAGCTGGTTCGCGAGGGGGCTCGCCCGATCAGCGGAGATACCGGACTGCGCGACGTCCAGCGTCTGGCTGAAGCCAACGACTTTCCTCCCGTCGATGAAACCAAACGCGGTCGCTATCAGCAAATCAACCTGCGTGACGCTTACGTTGATCACCTGTTCGGTTATATCAATGTCAAAAACCTCACGCCGCTCAAGCTGGTGATCAACTCCGGGAACGGCGCAGCGGGTCCGGTGGTGGACGCCATTGAAGCCCGCTTTAAAGCCCTCGGCGCGCCCGTGGAATTAATCAAAGTGCACAACACGCCGGACGGCAATTTCCCCAACGGTATTCCTAACCCACTACTGCCGGAATGCCGCGACGACACCCGCAATGCGGTCATCAAACACGGCGCGGATATGGGCATTGCTTTTGATGGCGATTTTGACCGCTGTTTCCTGTTTGACGAAAAAGGGCAGTTTATTGAGGGCTACTACATTGTCGGCCTGTTGGCAGAAGCATTCCTCGAAAAAAATCCCGGCGCGAAGATCATCCACGATCCACGTCTCTCCTGGAACACCGTTGATGTGGTGACTGCCGCAGGTGGCACGCCGGTAATGTCGAAAACCGGACACGCCTTTATTAAAGAACGTATGCGCAAGGAAGACGCCATCTATGGTGGCGAAATGAGCGCCCACCATTACTTCCGTGATTTCGCTTACTGCGACAGCGGCATGATCCCGTGGCTGCTGGTCGCCGAACTGGTGTGCCTGAAAGATAAAACGCTGGGCGAACTGGTACGCGACCGGATGGCGGCGTTTCCGGCAAGCGGTGAGATCAACAGCAAACTGGCGCAACCCGTTGAGGCGATTAACCGCGTGGAACAGCATTTTAGCCGTGAGGCGCTGGCGGTGGATCGCACCGATGGCATCAGCATGACCTTTGCCGACTGGCGCTTTAACCTGCGCACCTCCAATACCGAACCGGTGGTGCGCCTGAATGTGGAATCGCGCGGTGATGTGCCGCTGATGGAAGCGCGAACGCGAACTCTGCTGACGTTGCTGAACGAGTAA", - "dna_sequence_length": 1371, - "functions": [ - "phosphomannomutase" - ], - "id": "CDS_2033", - "location": [ - [ - "NC_000913", - 2122979, - "-", - 1371 - ] - ], - "md5": "948de3da318748be13f06ef438fc938f", - "parent_gene": "", - "protein_md5": "c6af55d39b703ee1f45e811904b5b0c8", - "protein_translation": "MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLGGDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLFGYINVKNLTPLKLVINSGNGAAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIPNPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLEKNPGAKIIHDPRLSWNTVDVVTAAGGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKDKTLGELVRDRMAAFPASGEINSKLAQPVEAINRVEQHFSREALAVDRTDGISMTFADWRFNLRTSNTEPVVRLNVESRGDVPLMEARTRTLLTLLNE", - "protein_translation_length": 456, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416553.1" - ], - [ - "gene_synonym", - "JW2034" - ], - [ - "gene_synonym", - "GeneID:946580" - ], - [ - "gene_synonym", - "GI:16129989" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24174" - ], - [ - "gene_synonym", - "b2049" - ], - [ - "gene_synonym", - "ECK2043" - ], - [ - "gene_synonym", - "cpsB" - ], - [ - "gene_synonym", - "mni" - ], - [ - "gene_synonym", - "manC" - ], - [ - "gene_synonym", - "ASAP:ABE-0006791" - ], - [ - "gene_synonym", - "EcoGene:EG10161" - ], - [ - "gene_synonym", - "rfbM" - ] - ], - "dna_sequence": "ATGGCGCAGTCGAAACTCTATCCAGTTGTGATGGCAGGTGGCTCCGGTAGCCGCTTATGGCCGCTTTCCCGCGTACTTTATCCCAAGCAGTTTTTATGCCTGAAAGGCGATCTCACCATGCTGCAAACCACCATCTGCCGCCTGAACGGCGTGGAGTGCGAAAGCCCGGTGGTGATTTGCAATGAGCAGCACCGCTTTATTGTCGCGGAACAGCTGCGTCAACTGAACAAACTTACCGAGAACATTATTCTCGAACCGGCAGGGCGAAACACGGCACCTGCCATTGCGCTGGCGGCGCTGGCGGCAAAACGTCATAGCCCGGAGAGCGACCCGTTAATGCTGGTATTGGCGGCGGATCATGTGATTGCCGATGAAGACGCGTTCCGTGCCGCCGTGCGTAATGCCATGCCATATGCCGAAGCGGGCAAGCTGGTGACCTTCGGCATTGTGCCGGATCTACCAGAAACCGGTTATGGCTATATTCGTCGCGGTGAAGTGTCTGCGGGTGAGCAGGATATGGTGGCCTTTGAAGTGGCGCAGTTTGTCGAAAAACCGAATCTGGAAACCGCTCAGGCCTATGTGGCAAGCGGCGAATATTACTGGAACAGCGGTATGTTCCTGTTCCGCGCCGGACGCTATCTCGAAGAACTGAAAAAATATCGCCCGGATATCCTCGATGCCTGTGAAAAAGCGATGAGCGCCGTCGATCCGGATCTCAATTTTATTCGCGTGGATGAAGAAGCGTTTCTCGCCTGCCCGGAAGAGTCGGTGGATTACGCGGTCATGGAACGTACGGCAGATGCTGTTGTGGTGCCGATGGATGCGGGCTGGAGCGATGTTGGCTCCTGGTCTTCATTATGGGAGATCAGCGCCCACACCGCCGAGGGCAACGTTTGCCACGGCGATGTGATTAATCACAAAACTGAAAACAGCTATGTGTATGCTGAATCTGGCCTGGTCACCACCGTCGGGGTGAAAGATCTGGTAGTGGTGCAGACCAAAGATGCGGTGCTGATTGCCGACCGTAACGCGGTACAGGATGTGAAAAAAGTGGTCGAGCAGATCAAAGCCGATGGTCGCCATGAGCATCGGGTGCATCGCGAAGTGTATCGTCCGTGGGGCAAATATGACTCTATCGACGCGGGCGACCGCTACCAGGTGAAACGCATCACCGTGAAACCGGGCGAGGGCTTGTCGGTACAGATGCACCATCACCGCGCGGAACACTGGGTGGTTGTCGCGGGAACGGCAAAAGTCACCATTGATGGTGATATCAAACTGCTTGGTGAAAACGAGTCCATTTATATTCCGCTGGGGGCGACGCATTGCCTGGAAAACCCGGGGAAAATTCCGCTCGATTTAATTGAAGTGCGCTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGTTTCGCGGATCGCTACGGACGGGTGTAA", - "dna_sequence_length": 1437, - "functions": [ - "mannose-1-phosphate guanyltransferase" - ], - "id": "CDS_2034", - "location": [ - [ - "NC_000913", - 2124520, - "-", - 1437 - ] - ], - "md5": "859e5ff059d6fda30ad89c66d0dd3140", - "parent_gene": "", - "protein_md5": "ac6c3bc38a32f8fc0fa0d5e16d50d338", - "protein_translation": "MAQSKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTTICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAAKRHSPESDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGYIRRGEVSAGEQDMVAFEVAQFVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLEELKKYRPDILDACEKAMSAVDPDLNFIRVDEEAFLACPEESVDYAVMERTADAVVVPMDAGWSDVGSWSSLWEISAHTAEGNVCHGDVINHKTENSYVYAESGLVTTVGVKDLVVVQTKDAVLIADRNAVQDVKKVVEQIKADGRHEHRVHREVYRPWGKYDSIDAGDRYQVKRITVKPGEGLSVQMHHHRAEHWVVVAGTAKVTIDGDIKLLGENESIYIPLGATHCLENPGKIPLDLIEVRSGSYLEEDDVVRFADRYGRV", - "protein_translation_length": 478, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16129990" - ], - [ - "gene_synonym", - "yefD" - ], - [ - "gene_synonym", - "JW2035" - ], - [ - "gene_synonym", - "b2050" - ], - [ - "gene_synonym", - "EcoGene:EG11790" - ], - [ - "gene_synonym", - "NP_416554.1" - ], - [ - "gene_synonym", - "ECK2044" - ], - [ - "gene_synonym", - "GeneID:946588" - ], - [ - "gene_synonym", - "ASAP:ABE-0006794" - ], - [ - "gene_synonym", - "wcaI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32057" - ] - ], - "dna_sequence": "ATGAAAATACTGGTCTACGGCATTAACTACTCGCCGGAGTTAACCGGCATCGGCAAATACACCGGCGAGATGGTGGAATGGCTGGCGGCACAAGGTCATGAGGTGCGGGTCATTACCGCACCGCCTTACTACCCGCAATGGCAGGTGGGCGAGAACTATTCCGCCTGGCGCTACAAACGAGAAGAGGGGGCCGCCACGGTGTGGCGCTGCCCGCTGTATGTGCCAAAACAGCCGAGCACCCTGAAACGCCTGTTGCATCTGGGCAGTTTTGCCGTCAGCAGTTTCTTTCCGCTGATGGCGCAACGTCGCTGGAAGCCGGATCGCATTATTGGCGTGGTGCCAACGCTGTTTTGCGCGCCGGGAATGCGCCTGCTGGCGAAACTCTCTGGTGCGCGTACCGTGCTGCATATTCAGGATTACGAAGTGGACGCCATGCTGGGGCTGGGCCTTGCCGGAAAAGGCAAAGGCGGCAAAGTGGCACAGCTGGCAACGGCGTTCGAACGTAGCGGACTGCATAACGTCGATAACGTCTCCACGATTTCGCGTTCGATGATGAATAAAGCCATCGAAAAAGGCGTGGCGGCGGAAAACGTCATCTTCTTCCCCAACTGGTCGGAAATTGCCCGTTTTCAGCATGTTGCAGATGCCGATGTTGATGCCCTTCGTAACCAGCTTGACCTGCCGGATAACAAAAAAATCATTCTTTACTCCGGCAATATTGGTGAAAAGCAGGGGCTGGAAAACGTTATTGAAGCTGCCGATCGTCTGCGCGATGAACCGCTGATTTTTGCCATTGTCGGGCAGGGCGGCGGCAAAGCGCGGCTGGAAAAAATGGCGCAGCAGCGTGGACTGCGCAACATGCAATTTTTCCCGCTGCAATCGTATGACGCTTTACCCGCACTGCTGAAGATGGGCGATTGCCATCTGGTGGTGCAAAAACGCGGCGCGGCAGATGCCGTATTGCCGTCGAAACTGACCAATATTCTGGCAGTAGGCGGTAACGCGGTGATTACTGCTGAAGCCTACACAGAACTGGGGCAGCTTTGCGAAACCTTTCCGGGCATTGCGGTTTGCGTTGAACCGGAATCGGTCGAGGCGCTGGTGGCGGGGATCCGTCAGGCGCTCCTGCTGCCCAAACACAACACGGTGGCACGTGAATATGCCGAACGCACGCTCGATAAAGAGAACGTGTTACGTCAATTTATAAATGATATTCGGGGATAA", - "dna_sequence_length": 1224, - "functions": [ - "putative glycosyl transferase" - ], - "id": "CDS_2035", - "location": [ - [ - "NC_000913", - 2125746, - "-", - 1224 - ] - ], - "md5": "12b20c1b4dde9227660e509269c58ae0", - "parent_gene": "", - "protein_md5": "4eccba8c99c086fd6c9d0f394a967fae", - "protein_translation": "MKILVYGINYSPELTGIGKYTGEMVEWLAAQGHEVRVITAPPYYPQWQVGENYSAWRYKREEGAATVWRCPLYVPKQPSTLKRLLHLGSFAVSSFFPLMAQRRWKPDRIIGVVPTLFCAPGMRLLAKLSGARTVLHIQDYEVDAMLGLGLAGKGKGGKVAQLATAFERSGLHNVDNVSTISRSMMNKAIEKGVAAENVIFFPNWSEIARFQHVADADVDALRNQLDLPDNKKIILYSGNIGEKQGLENVIEAADRLRDEPLIFAIVGQGGGKARLEKMAQQRGLRNMQFFPLQSYDALPALLKMGDCHLVVQKRGAADAVLPSKLTNILAVGGNAVITAEAYTELGQLCETFPGIAVCVEPESVEALVAGIRQALLLPKHNTVAREYAERTLDKENVLRQFINDIRG", - "protein_translation_length": 407, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2045" - ], - [ - "gene_synonym", - "gmm" - ], - [ - "gene_synonym", - "b2051" - ], - [ - "gene_synonym", - "nudD" - ], - [ - "gene_synonym", - "EcoGene:EG11789" - ], - [ - "gene_synonym", - "GeneID:946559" - ], - [ - "gene_synonym", - "ASAP:ABE-0006796" - ], - [ - "gene_synonym", - "yefC" - ], - [ - "gene_synonym", - "wcaH" - ], - [ - "gene_synonym", - "NP_416555.2" - ], - [ - "gene_synonym", - "JW5335" - ], - [ - "gene_synonym", - "GI:90111376" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32056" - ] - ], - "dna_sequence": "ATGTTTTTACGTCAGGAAGACTTTGCCACGGTAGTGCGCTCCACTCCGCTTGTCTCTCTCGACTTTATTGTCGAGAACAGTCGCGGCGAGTTTCTGCTTGGCAAAAGAACCAACCGCCCGGCGCAGGGTTACTGGTTTGTGCCGGGAGGGCGCGTGCAGAAAGACGAAACGCTGGAAGCCGCATTTGAGCGGCTGACGATGGCGGAACTGGGGCTGCGTTTGCCGATAACAGCAGGCCAGTTTTACGGTGTCTGGCAGCACTTTTATGACGATAACTTCTCTGGCACGGATTTCACCACTCACTATGTGGTGCTCGGTTTTCGCTTCAGAGTATCGGAAGAAGAGCTGTTACTGCCGGATGAGCAGCATGACGATTACCGCTGGCTGACGTCGGACGCGCTGCTCGCCAGTGATAATGTTCATGCTAACAGCCGCGCCTATTTTCTCGCTGAGAAGCGTACCGGAGTACCCGGATTATGA", - "dna_sequence_length": 480, - "functions": [ - "GDP-mannose mannosyl hydrolase" - ], - "id": "CDS_2036", - "location": [ - [ - "NC_000913", - 2126222, - "-", - 480 - ] - ], - "md5": "be22757a484008d682eb8f4e8bebdd1f", - "parent_gene": "", - "protein_md5": "a2903ac131f1fb9678d1e7d074054bc8", - "protein_translation": "MFLRQEDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLASDNVHANSRAYFLAEKRTGVPGL", - "protein_translation_length": 159, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yefB" - ], - [ - "gene_synonym", - "b2052" - ], - [ - "gene_synonym", - "JW2037" - ], - [ - "gene_synonym", - "ECK2046" - ], - [ - "gene_synonym", - "EcoGene:EG11788" - ], - [ - "gene_synonym", - "GI:16129992" - ], - [ - "gene_synonym", - "GeneID:946563" - ], - [ - "gene_synonym", - "ASAP:ABE-0006801" - ], - [ - "gene_synonym", - "wcaG" - ], - [ - "gene_synonym", - "fcl" - ], - [ - "gene_synonym", - "NP_416556.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32055" - ] - ], - "dna_sequence": "ATGAGTAAACAACGAGTTTTTATTGCTGGTCATCGCGGGATGGTCGGTTCCGCCATCAGGCGGCAGCTCGAACAGCGCGGTGATGTGGAACTGGTATTACGCACCCGCGACGAGCTGAACCTGCTGGACAGCCGCGCCGTGCATGATTTCTTTGCCAGCGAACGTATTGACCAGGTCTATCTGGCGGCGGCGAAAGTGGGCGGCATTGTTGCCAACAACACCTATCCGGCGGATTTCATCTACCAGAACATGATGATTGAGAGCAACATCATTCACGCCGCGCATCAGAACGACGTGAACAAACTGCTGTTTCTCGGATCGTCCTGCATCTACCCGAAACTGGCAAAACAGCCGATGGCAGAAAGCGAGTTGTTGCAGGGCACGCTGGAGCCGACTAACGAGCCTTATGCTATTGCCAAAATCGCCGGGATCAAACTGTGCGAATCATACAACCGCCAGTACGGACGCGATTACCGCTCAGTCATGCCGACCAACCTGTACGGGCCACACGACAACTTCCACCCGAGTAATTCGCATGTGATCCCAGCATTGCTGCGTCGCTTCCACGAGGCGACGGCACAGAATGCGCCGGACGTGGTGGTATGGGGCAGCGGTACACCGATGCGCGAATTTCTGCACGTCGATGATATGGCGGCGGCGAGCATTCATGTCATGGAGCTGGCGCATGAAGTCTGGCTGGAGAACACCCAGCCGATGTTGTCGCACATTAACGTCGGCACGGGCGTTGACTGCACTATCCGCGAGCTGGCGCAAACCATCGCCAAAGTGGTGGGTTACAAAGGCCGGGTGGTTTTTGATGCCAGCAAACCGGATGGCACGCCGCGCAAACTGCTGGATGTGACGCGCCTGCATCAGCTTGGCTGGTATCACGAAATCTCACTGGAAGCGGGGCTTGCCAGCACTTACCAGTGGTTCCTTGAGAATCAAGACCGCTTTCGGGGGTAA", - "dna_sequence_length": 966, - "functions": [ - "bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase" - ], - "id": "CDS_2037", - "location": [ - [ - "NC_000913", - 2127190, - "-", - 966 - ] - ], - "md5": "384191419eb4e6af884a4b661c7ebb88", - "parent_gene": "", - "protein_md5": "6c47be6c23f460a9f669eeaacaeaa588", - "protein_translation": "MSKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENQDRFRG", - "protein_translation_length": 321, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yefA" - ], - [ - "gene_synonym", - "GI:16129993" - ], - [ - "gene_synonym", - "b2053" - ], - [ - "gene_synonym", - "NP_416557.1" - ], - [ - "gene_synonym", - "JW2038" - ], - [ - "gene_synonym", - "ECK2047" - ], - [ - "gene_synonym", - "yefN" - ], - [ - "gene_synonym", - "gmd" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC88" - ], - [ - "gene_synonym", - "EcoGene:EG11787" - ], - [ - "gene_synonym", - "ASAP:ABE-0006803" - ], - [ - "gene_synonym", - "GeneID:946562" - ] - ], - "dna_sequence": "ATGTCAAAAGTCGCTCTCATCACCGGTGTAACCGGACAAGACGGTTCTTACCTGGCAGAGTTTCTGCTGGAAAAAGGTTACGAGGTGCATGGTATTAAGCGTCGCGCATCGTCATTCAACACCGAGCGCGTGGATCACATTTATCAGGATCCGCACACCTGCAACCCGAAATTCCATCTGCATTATGGCGACCTGAGTGATACCTCTAACCTGACGCGCATTTTGCGTGAAGTACAGCCGGATGAAGTGTACAACCTGGGCGCAATGAGCCACGTTGCGGTCTCTTTTGAGTCACCAGAATATACCGCTGACGTCGACGCGATGGGTACGCTGCGCCTGCTGGAGGCGATCCGCTTCCTCGGTCTGGAAAAGAAAACTCGTTTCTATCAGGCTTCCACCTCTGAACTGTATGGTCTGGTGCAGGAAATTCCGCAGAAAGAGACCACGCCGTTCTACCCGCGATCTCCGTATGCGGTCGCCAAACTGTACGCCTACTGGATCACCGTTAACTACCGTGAATCCTACGGCATGTACGCCTGTAACGGAATTCTCTTCAACCATGAATCCCCGCGCCGCGGCGAAACCTTCGTTACCCGCAAAATCACCCGCGCAATCGCCAACATCGCCCAGGGGCTGGAGTCGTGCCTGTACCTCGGCAATATGGATTCCCTGCGTGACTGGGGCCACGCCAAAGACTACGTAAAAATGCAGTGGATGATGCTGCAGCAGGAACAGCCGGAAGATTTCGTTATCGCGACCGGCGTTCAGTACTCCGTGCGTCAGTTCGTGGAAATGGCGGCAGCACAGCTGGGCATCAAACTGCGCTTTGAAGGCACGGGCGTTGAAGAGAAGGGCATTGTGGTTTCCGTCACCGGGCATGACGCGCCGGGCGTTAAACCGGGTGATGTGATTATCGCTGTTGACCCGCGTTACTTCCGTCCGGCTGAAGTTGAAACGCTGCTCGGCGACCCGACCAAAGCGCACGAAAAACTGGGCTGGAAACCGGAAATCACCCTCAGAGAGATGGTGTCTGAAATGGTGGCTAATGACCTCGAAGCGGCGAAAAAACACTCTCTGCTGAAATCTCACGGCTACGACGTGGCGATCGCGCTGGAGTCATAA", - "dna_sequence_length": 1122, - "functions": [ - "GDP-D-mannose dehydratase, NAD(P)-binding" - ], - "id": "CDS_2038", - "location": [ - [ - "NC_000913", - 2128314, - "-", - 1122 - ] - ], - "md5": "994ef03b863c06b3420e4565d67d96f1", - "parent_gene": "", - "protein_md5": "d6a0ba6bed90c6f7d54a08c3fbbcd213", - "protein_translation": "MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHSLLKSHGYDVAIALES", - "protein_translation_length": 373, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2054" - ], - [ - "gene_synonym", - "GI:16129994" - ], - [ - "gene_synonym", - "GeneID:946578" - ], - [ - "gene_synonym", - "ECK2048" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACD2" - ], - [ - "gene_synonym", - "JW2039" - ], - [ - "gene_synonym", - "NP_416558.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006805" - ], - [ - "gene_synonym", - "wcaF" - ], - [ - "gene_synonym", - "EcoGene:EG13574" - ] - ], - "dna_sequence": "ATGCAAGATTTAAGCGGTTTCTCGGTGCCGAAAGGGTTCCGGGGCGGCAACGCTATTAAAGTGCAATTATGGTGGGCAGTACAGGCAACAATATTTGCCTGGTCGCCACAAGTATTGTATCGCTGGCGGGCTTTTTTATTACGTTTATTCGGAGCAAAAATAGGAAAAAACGTAGTTATTCGTCCGTCAGTAAAAATTACCTATCCGTGGAAATTAACCTTAGGTGATTACGCGTGGGTCGGCGATGACGTCAATTTATATACCCTCGGTGAAATAACCATTGGCGCACATTCGGTGATATCGCAAAAAAGTTATTTATGCACCGGTAGCCACGACCATGCAAGTCAACATTTCACCATTAACGCCACGCCTATTGTGATTGGCGAGAAATGCTGGCTGGCAACCGATGTCTTTGTTGCCCCAGGCGTCACAATCGGCGACGGCACCGTCGTGGGTGCACGAAGCAGTGTTTTTAAATCGCTTCCGGCAAATGTGGTTTGCCGGGGGAATCCCGCAGTGGTGATACGCGAACGCGTTGAAACTGAATAA", - "dna_sequence_length": 549, - "functions": [ - "putative acyl transferase" - ], - "id": "CDS_2039", - "location": [ - [ - "NC_000913", - 2128888, - "-", - 549 - ] - ], - "md5": "13a5b631f0e3f45c68cdbd13b9ac4bc5", - "parent_gene": "", - "protein_md5": "a68724c1a84d06661c8dd2c208fc6342", - "protein_translation": "MQDLSGFSVPKGFRGGNAIKVQLWWAVQATIFAWSPQVLYRWRAFLLRLFGAKIGKNVVIRPSVKITYPWKLTLGDYAWVGDDVNLYTLGEITIGAHSVISQKSYLCTGSHDHASQHFTINATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKSLPANVVCRGNPAVVIRERVETE", - "protein_translation_length": 182, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2055" - ], - [ - "gene_synonym", - "GI:16129995" - ], - [ - "gene_synonym", - "ECK2049" - ], - [ - "gene_synonym", - "GeneID:946543" - ], - [ - "gene_synonym", - "JW2040" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P71239" - ], - [ - "gene_synonym", - "ASAP:ABE-0006807" - ], - [ - "gene_synonym", - "NP_416559.1" - ], - [ - "gene_synonym", - "wcaE" - ], - [ - "gene_synonym", - "EcoGene:EG13573" - ] - ], - "dna_sequence": "ATGTTGCTTAGCATAATCACTGTCGCGTTTCGTAACCTCGAAGGGATAGTCAAAACACATGCCTCGCTGGCGCATCTGGCGCAGGTGGAAGATATCAGCTTCGAATGGATTGTTGTCGATGGCGGTTCCAACGACGGCACCCGTGAGTATCTGGAAAATCTCAATGGTATCTTTAACCTACGCTTTGTCAGCGAGCCAGATAACGGTATCTACGACGCCATGAACAAAGGCATTGCGATGGCACAAGGCAAGTTCGCGTTGTTTCTCAATTCGGGCGATATTTTTCATCAGAATGCCGCAAATTTTGTCCGTAAGTTAAAAATGCAAAAAGATAACGTGATGATCACCGGCGATGCGCTGCTGGATTTTGGCGACGGGCATAAAATTAAACGTAGCGCCAAACCGGGCTGGTATATTTATCACAGCCTGCCCGCCAGTCATCAGGCGATATTTTTCCCTGTATCCGGCTTGAAAAAATGGCGTTATGACCTGGAATATAAAGTTTCTTCCGACTACGCGCTGGCAGCCAAAATGTATAAAGCCGGTTATGCATTTAAAAAACTCAATGGCCTGGTGTCTGAATTTTCCATGGGTGGGGTATCTACCACCAATAATATGGAATTGTGTGCTGACGCGAAAAAAGTCCAACGACAAATATTACATGTGCCTGGCTTTTGGGCTGAATTATCCTGGCATTTACGCCAACGTACTACCTCAAAGACGAAAGCCTTATATAACAAAGTCTGA", - "dna_sequence_length": 747, - "functions": [ - "putative glycosyl transferase" - ], - "id": "CDS_2040", - "location": [ - [ - "NC_000913", - 2129650, - "-", - 747 - ] - ], - "md5": "6b7eb926e063fe497da28732c1355edc", - "parent_gene": "", - "protein_md5": "c815d343b6a9233a5612ac430919ea89", - "protein_translation": "MLLSIITVAFRNLEGIVKTHASLAHLAQVEDISFEWIVVDGGSNDGTREYLENLNGIFNLRFVSEPDNGIYDAMNKGIAMAQGKFALFLNSGDIFHQNAANFVRKLKMQKDNVMITGDALLDFGDGHKIKRSAKPGWYIYHSLPASHQAIFFPVSGLKKWRYDLEYKVSSDYALAAKMYKAGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQILHVPGFWAELSWHLRQRTTSKTKALYNKV", - "protein_translation_length": 248, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2056" - ], - [ - "gene_synonym", - "ECK2050" - ], - [ - "gene_synonym", - "GeneID:946550" - ], - [ - "gene_synonym", - "GI:16129996" - ], - [ - "gene_synonym", - "JW2041" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P71238" - ], - [ - "gene_synonym", - "NP_416560.1" - ], - [ - "gene_synonym", - "wcaD" - ], - [ - "gene_synonym", - "EcoGene:EG13572" - ], - [ - "gene_synonym", - "ASAP:ABE-0006809" - ] - ], - "dna_sequence": "ATGTCAACTTCTATCAGAATCTGTAGCTACCTGTTGCTGCCGCTGATTTATCTGCTGGTTAACGTCAAAATCGCCCAGCTTGGCGAAAGTTTCCCCATCACCATCGTCACTTTTTTACCTGTCTTGTTACTGCTGTTTTTAGAACGCATCAGCGTTAAAAAATTGATGATTGCCTTAGGGATTGGCGCGGGACTCACGGCGTTTAACTATCTGTTTGGTCAGTCGCTGGATGCCAGTAAATACGTCACTTCAACTATGCTGTTTGTCTATATTGTGATCATTATTGGCATGGTGTGGAGTATTCGTTTTAAAACAATTTCGCCACACAACCATCGCAAGATATTACGTTTCTTTTATCTGGTGGTCGGGCTGGTGGTGGCGCTGGCGGCGGTGGAGATGGCACAAATTATCCTCACCGGTGGCAGCAGTATTATGGAGTCGATTTCGAAATATCTGATTTACAGCAACAGCTATGTGCTGAATTTCATTAAATTCGGCGGCAAGCGCACGACAGCACTTTATTTCGAACCGGCATTTTTCGCTCTGGCATTAATCTCAATTTGGCTCAGCATCAAACAGTTTGGTATCAAAACGCCTAAAACAGATGCTATGATTCTCGCAGGGATAATATTATCCGGATCGTTTTCAGGGGTTATGACCTTTATCCTGTTTTATTTGCTGGAGTGGGCATTTCAATATCTGAATAAAGAGGCGATTAAGAAAAAGTTACCGTTAGCATTGATTTCTCTGGCTGTATTCCTGGTTGGTGTGGTAATCGCGTTTCCTTATATTTCCACCCGTCTGGGCGATTTAGGTACGGAAGGATCGTCATCATATTATCGTATTGTCGGTCCGCTGGTGATGGTCGGTTATTCTTTGACCCATATTGACGGTGTAGTCAGATTTGGCTCACTTTATGAATATGTCGCATCATTCGGAATATTTAACGGTGCGGATGTCGGAAAAACCATAGACAATGGTTTGTATCTGCTGATTATTTATTTTTCCTGGTTCGCGGTGTTTTTATCACTGTGGTACATGGGGAAAGTGATAAAAATGATGATCAACGCTTTTGGTGATAACCGCAATTTTCGCGTGCAATTATATCTTTTTACTCCGGTATCGCTGTTTTTTACCGGTTCGATATTTAGCCCGGAATATGCATTTTTAATCGTCTGTCCGTTTATTTTGCGAAAAGCGTTAAATATTACGAGGTAA", 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"gene_synonym", - "JW2042" - ], - [ - "gene_synonym", - "EcoGene:EG13571" - ], - [ - "gene_synonym", - "ASAP:ABE-0006811" - ], - [ - "gene_synonym", - "NP_416561.1" - ], - [ - "gene_synonym", - "GeneID:946579" - ], - [ - "gene_synonym", - "wcaC" - ] - ], - "dna_sequence": "ATGAATATTTTGCAATTTAATGTGCGACTGGCGGAAGGCGGGGCAGCAGGTGTGGCGTTAGATCTCCACCAGCGTGCGCTGCAACAGGGGCTGGCGTCACATTTTGTCTACGGTTACGGCAAAGGCGGCAAAGAGAGCGTCAGCCATCAGAACTATCCGCAGGTCATCAAACATACGCCGCGGATGACCGCGATGGCGAATATTGCTCTGTTTCGTCTGTTTAATCGCGATCTGTTTGGCAATTTCAATGAGTTATATCGCACCATTACTCGCACAGCGGGTCCGGTGGTCCTGCATTTTCATGTGCTGCACAGCTACTGGCTAAATCTTAAGAGCGTGGTGCGCTTTTGCGAAAAAGTGAAAAACCATAAACCGGACGTCACTCTGGTCTGGACGCTGCACGACCACTGGAGTGTTACCGGACGCTGCGCCTTTACCGACGGTTGCGAAGGCTGGAAAACAGGCTGCCAGAAATGCCCGACCTTAAATAACTATCCGCCGGTGAAGATTGATCGCGCACACCAACTGGTGGCGGGCAAACGCCAGTTATTCCGTGAGATGCTGGCGCTGGGCTGTCAGTTTATTTCCCCCAGCCAGCATGTGGCTGACGCTTTCAATAGCCTGTACGGTCCAGGGCGTTGCCGGATTATCAATAATGGCATTGATATGGCAACTGAAGCGATTCTGGCGGACTTGCCTCCGGTGCGCGAAACCCAGGGCAAGCCGAAAATCGCGGTGGTGGCGCATGATCTGCGTTACGACGGCAAAACTAACCAGCAACTGGTACGCGAGATGATGGCGCTGGGCGACAAAATTGAACTGCATACCTTTGGTAAGTTCTCGCCGTTCACCGCTGGCAACGTGGTTAATCACGGCTTTGAAACCGACAAACGTAAGCTGATGAGCGCGCTCAATCAGATGGATGCGCTGGTATTCAGTTCTCGCGTCGATAACTACCCGCTGATTTTGTGTGAGGCGCTATCGATTGGCGTGCCGGTGATTGCCACCCATAGCGATGCGGCGCGGGAAGTGTTGCAAAAATCCGGCGGTAAAACCGTCAGCGAAGAAGAGGTGCTGCAACTGGTGCAGTTAAGCAAACCGGAAATCGCGCAGGCGATATTTGGTACCACGCTGGCTGAGTTCAGCCAACGCAGCCGCGCCGCCTACAGTGGACAACAGATGCTGGAGGAGTATGTCAACTTCTATCAGAATCTGTAG", 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"GeneID:946573" - ], - [ - "gene_synonym", - "b2058" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACC9" - ], - [ - "gene_synonym", - "EcoGene:EG13570" - ], - [ - "gene_synonym", - "ASAP:ABE-0006813" - ], - [ - "gene_synonym", - "wcaB" - ] - ], - "dna_sequence": "ATGCTGGAAGATCTGCGCGCCAACAGCTGGAGTTTACGCCCGTGCTGCATGGTTCTTGCCTATCGTGTTGCTCATTTTTGTTCGGTGTGGCGCAAAAAGAACGTCCTCAACAATCTGTGGGCGGCCCCGCTGCTGGTGCTGTATCGCATTATCACCGAATGCTTTTTCGGTTATGAAATCCAGGCTGCCGCGACCATTGGCCGCCGCTTTACTATCCATCACGGTTACGCCGTCGTGATCAATAAAAACGTGGTAGCGGGGGATGATTTTACCATTCGCCACGGCGTCACTATCGGCAATCGTGGTGCCGATAACATGGCATGTCCACACATTGGCAACGGCGTCGAACTCGGTGCCAACGTCATTATTCTTGGTGATATCACGCTTGGTAACAACGTCACCGTGGGCGCGGGCAGCGTGGTGCTCGACTCTGTCCCGGACAACGCGCTGGTGGTGGGAGAAAAAGCGCGAGTGAAGGTAATTAAATGA", - "dna_sequence_length": 489, - "functions": [ - "putative acyl transferase" - ], - "id": "CDS_2043", - "location": [ - [ - "NC_000913", - 2132555, - "-", - 489 - ] - ], - "md5": "b50f26014cdc5a9bb39083c511ec7dab", - "parent_gene": "", - "protein_md5": "8ca874c561ea416a208dae5f798cfc0c", - "protein_translation": "MLEDLRANSWSLRPCCMVLAYRVAHFCSVWRKKNVLNNLWAAPLLVLYRIITECFFGYEIQAAATIGRRFTIHHGYAVVINKNVVAGDDFTIRHGVTIGNRGADNMACPHIGNGVELGANVIILGDITLGNNVTVGAGSVVLDSVPDNALVVGEKARVKVIK", - "protein_translation_length": 162, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2053" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77414" - ], - [ - "gene_synonym", - "GI:16129999" - ], - [ - "gene_synonym", - "JW2044" - ], - [ - "gene_synonym", - "NP_416563.1" - ], - [ - "gene_synonym", - "b2059" - ], - [ - "gene_synonym", - "GeneID:946570" - ], - [ - "gene_synonym", - "EcoGene:EG13569" - ], - [ - "gene_synonym", - "wcaA" - ], - [ - "gene_synonym", - "ASAP:ABE-0006816" - ] - ], - "dna_sequence": "ATGAAAAACAATCCGCTGATCTCAATCTATATGCCGACCTGGAACCGCCAACAACTGGCGATTCGGGCAATAAAATCGGTTTTGCGCCAGGACTACAGCAACTGGGAGATGATCATCGTGGATGATTGCTCCACCTCCTGGGAACAACTGCAACAGTACGTCACCGCCCTCAACGATCCGCGTATCACTTACATTCACAACGACATTAACAGCGGGGCGTGCGCGGTACGTAACCAGGCGATTATGCTGGCGCAAGGGGAATATATCACCGGGATTGATGACGATGACGAATGGACACCCAACCGTCTGAGCGTCTTCCTCGCCCATAAACAGCAACTGGTCACACACGCCTTTTTGTACGCTAACGACTACGTTTGCCAGGGCGAAGTCTATTCCCAACCGGCAAGCTTGCCGCTGTATCCCAAATCGCCGTATTCACGCCGCCTGTTCTACAAACGCAATATCATTGGCAACCAGGTCTTTACCTGGGCATGGCGTTTCAAAGAGTGTTTGTTCGATACCGAACTGAAAGCGGCACAGGATTACGACATCTTCCTGCGGATGGTGGTGGAGTACGGCGAACCGTGGAAAGTAGAAGAGGCGACGCAGATCCTGCATATCAATCACGGTGAAATGCAGATCACCTCGTCACCGAAAAAATTCTCCGGGTACTTCCACTTTTACCGCAAGCACAAAGACAAATTCGACCGCGCCAGCAAAAAATATCAGCTGTTTACCCTCTACCAGATCCGCAATAAACGTATGACCTGGCGCACTTTGCTGACGCTGCTGTCGGTGCGTAACGGCAAACGTCTGGCTGATGGTATTCGGGGGCGCTAA", - "dna_sequence_length": 840, - "functions": [ - "putative glycosyl transferase" - ], - "id": "CDS_2044", - "location": [ - [ - "NC_000913", - 2133397, - "-", - 840 - ] - ], - "md5": "0e0fbd74bbccdf97a5a940eca9099cec", - "parent_gene": "", - "protein_md5": "168bb631a463470e53944fa8b3e1b28d", - "protein_translation": "MKNNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTSWEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQVFTWAWRFKECLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSPKKFSGYFHFYRKHKDKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLADGIRGR", - "protein_translation_length": 279, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2060" - ], - [ - "gene_synonym", - "ECK2054" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76387" - ], - [ - "gene_synonym", - "GeneID:946567" - ], - [ - "gene_synonym", - "JW2045" - ], - [ - "gene_synonym", - "ASAP:ABE-0006819" - ], - [ - "gene_synonym", - "NP_416564.4" - ], - [ - "gene_synonym", - "GI:90111377" - ], - [ - "gene_synonym", - "wzc" - ], - [ - "gene_synonym", - "EcoGene:EG13568" - ] - ], - "dna_sequence": "ATGACAGAAAAAGTAAAACAACATGCCGCTCCGGTAACGGGCAGTGATGAAATCGATATTGGTCGCCTGGTCGGCACCGTCATTGAAGCGCGCTGGTGGGTGATTGGCATCACCACCGTATTCGCCCTCTGTGCCGTGGTTTACACCTTCTTCGCCACGCCGATTTATAGTGCCGACGCACTGGTACAAATCGAGCAAAACAGCGGCAATTCGTTAGTGCAGGACATTGGTTCGGCATTAGCCAACAAACCGCCTGCATCGGACGCCGAGATCCAGTTGATTCGTTCGCGTCTGGTGCTTGGTAAAACGGTGGACGATCTCGACCTCGATATTGCAGTGAGCAAAAACACGTTCCCGATTTTCGGTGCGGGCTGGGATCGCCTGATGGGACGTCAGAACGAGACGGTGAAAGTGACCACCTTTAACCGCCCGAAAGAGATGGCGGATCAGGTGTTTACGCTTAATGTGCTGGACAACAAAAACTACACCCTGAGCAGCGACGGCGGCTTTAGCGCCCGGGGGCAAGCGGGCCAGATGCTGAAAAAAGAAGGCGTCACGCTGATGGTTGAAGCCATTCACGCCAGCCCGGGCAGTGAGTTTACCGTCACCAAATACTCCACGCTGGGGATGATCAACCAACTGCAAAACAGCCTGACGGTAACGGAGAACGGCAAAGACGCTGGCGTTTTGAGCCTGACTTATACCGGTGAAGATCGTGAACAGATCCGCGACATTCTTAACAGCATCGCCCGTAACTATCAGGAACAAAATATTGAGCGCAAATCGGCGGAAGCGTCGAAAAGCCTCGCCTTCCTCGCGCAACAGTTACCGGAAGTACGTAGCCGCTTGGATGTTGCCGAAAACAAACTGAATGCCTTCCGTCAGGATAAAGATTCTGTTGATCTGCCGCTGGAAGCAAAAGCGGTGCTCGATTCGATGGTGAACATCGATGCGCAGTTGAACGAACTGACCTTTAAAGAGGCGGAAATCTCCAAGCTGTACACCAAAGTTCACCCGGCGTACCGCACGCTGCTGGAGAAACGTCAGGCGCTGGAAGACGAAAAAGCCAAACTTAACGGTCGCGTAACGGCGATGCCGAAAACCCAGCAGGAGATTGTCCGTCTGACCCGCGATGTCGAGTCTGGTCAGCAGGTCTATATGCAACTGCTGAATAAAGAGCAGGAGCTGAAAATCACCGAGGCCAGCACCGTCGGCGATGTGCGCATTGTTGACCCGGCAATCACTCAGCCTGGCGTGCTGAAACCGAAGAAAGGGCTGATTATCCTCGGCGCGATTATCCTTGGCCTGATGCTTTCTATCGTGGGTGTGCTGCTGCGCTCGTTGTTTAATCGCGGCATTGAAAGCCCGCAAGTACTGGAAGAACACGGTATTAGCGTCTATGCCAGCATCCCGCTGTCGGAATGGCAGAAAGCGCGTGATAGCGTCAAAACCATCAAAGGGATTAAACGCTATAAACAGAGCCAGCTACTGGCGGTGGGGAATCCAACCGATCTGGCGATTGAAGCCATCCGTAGTCTGCGTACCAGTTTGCACTTCGCGATGATGCAGGCACAGAACAATGTGTTGATGATGACCGGGGTTAGCCCGTCAATTGGTAAAACCTTTGTCTGCGCCAACCTGGCGGCGGTGATCAGCCAGACCAATAAACGCGTGTTGTTGATCGACTGCGATATGCGCAAAGGCTACACCCACGAGCTGTTGGGCACTAATAACGTTAATGGCCTGTCGGAAATTCTGATTGGTCAGGGCGATATTACTACCGCTGCTAAACCGACCTCTATTGCCAAATTTGACCTGATCCCGCGCGGTCAGGTGCCGCCAAATCCTTCTGAACTGTTGATGAGCGAACGCTTTGCCGAACTGGTGAACTGGGCGAGTAAAAACTATGACCTGGTGTTGATTGATACGCCGCCGATTCTGGCAGTGACCGATGCGGCAATTGTTGGTCGTCATGTCGGAACCACGTTAATGGTGGCGCGTTATGCGGTCAACACATTGAAAGAAGTGGAAACCAGTCTGAGCCGCTTTGAGCAAAACGGTATTCCGGTGAAAGGGGTGATTCTGAACTCCATCTTCCGCCGCGCCAGCGCGTATCAGGATTATGGCTATTACGAATACGAATATAAGTCGGATGCGAAATAA", 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"MTEKVKQHAAPVTGSDEIDIGRLVGTVIEARWWVIGITTVFALCAVVYTFFATPIYSADALVQIEQNSGNSLVQDIGSALANKPPASDAEIQLIRSRLVLGKTVDDLDLDIAVSKNTFPIFGAGWDRLMGRQNETVKVTTFNRPKEMADQVFTLNVLDNKNYTLSSDGGFSARGQAGQMLKKEGVTLMVEAIHASPGSEFTVTKYSTLGMINQLQNSLTVTENGKDAGVLSLTYTGEDREQIRDILNSIARNYQEQNIERKSAEASKSLAFLAQQLPEVRSRLDVAENKLNAFRQDKDSVDLPLEAKAVLDSMVNIDAQLNELTFKEAEISKLYTKVHPAYRTLLEKRQALEDEKAKLNGRVTAMPKTQQEIVRLTRDVESGQQVYMQLLNKEQELKITEASTVGDVRIVDPAITQPGVLKPKKGLIILGAIILGLMLSIVGVLLRSLFNRGIESPQVLEEHGISVYASIPLSEWQKARDSVKTIKGIKRYKQSQLLAVGNPTDLAIEAIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMRKGYTHELLGTNNVNGLSEILIGQGDITTAAKPTSIAKFDLIPRGQVPPNPSELLMSERFAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYAVNTLKEVETSLSRFEQNGIPVKGVILNSIFRRASAYQDYGYYEYEYKSDAK", - "protein_translation_length": 720, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2061" - ], - [ - "gene_synonym", - "ECK2055" - ], - [ - "gene_synonym", - "GI:16130001" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAB2" - ], - [ - "gene_synonym", - "GeneID:946564" - ], - [ - "gene_synonym", - "JW2046" - ], - [ - "gene_synonym", - "NP_416565.1" - ], - [ - "gene_synonym", - "EcoGene:EG13567" - ], - [ - "gene_synonym", - "ASAP:ABE-0006822" - ], - [ - "gene_synonym", - "wzb" - ] - ], - "dna_sequence": "ATGTTTAACAACATCTTAGTTGTCTGTGTCGGCAATATTTGCCGTTCCCCGACGGCGGAACGCTTACTGCAACGTTATCACCCGGAGCTGAAAGTGGAGTCCGCTGGACTCGGCGCGCTGGTCGGTAAGGGCGCTGATCCTACCGCTATCAGCGTCGCCGCAGAACATCAACTGTCTCTGGAAGGTCACTGTGCCCGTCAAATCAGCCGCCGTCTGTGTCGCAACTACGACCTGATTTTGACCATGGAAAAGCGCCATATCGAACGCTTATGCGAGATGGCACCGGAGATGCGCGGCAAAGTGATGCTGTTTGGTCACTGGGATAACGAATGTGAAATCCCCGATCCGTATCGCAAAAGCCGGGAAACGTTTGCAGCGGTGTACACATTACTTGAACGGTCTGCCCGCCAGTGGGCGCAGGCATTGAACGCAGAGCAGGTATAA", - "dna_sequence_length": 444, - "functions": [ - "colanic acid production protein-tyrosine-phosphatase", - "Wzc-P dephosphorylase" - ], - "id": "CDS_2046", - "location": [ - [ - "NC_000913", - 2136098, - "-", - 444 - ] - ], - "md5": "f8e19df95db993448ee0803e20a70beb", - "parent_gene": "", - "protein_md5": "44e6c4215aea61e17ba2111cbe576c39", - "protein_translation": "MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKGADPTAISVAAEHQLSLEGHCARQISRRLCRNYDLILTMEKRHIERLCEMAPEMRGKVMLFGHWDNECEIPDPYRKSRETFAAVYTLLERSARQWAQALNAEQV", - "protein_translation_length": 147, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2062" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A930" - ], - [ - "gene_synonym", - "GI:16130002" - ], - [ - "gene_synonym", - "ECK2056" - ], - [ - "gene_synonym", - "GeneID:946558" - ], - [ - "gene_synonym", - "JW2047" - ], - [ - "gene_synonym", - "NP_416566.1" - ], - [ - "gene_synonym", - "EcoGene:EG13566" - ], - [ - "gene_synonym", - "ASAP:ABE-0006825" - ], - [ - "gene_synonym", - "wza" - ] - ], - "dna_sequence": "ATGATGAAATCCAAAATGAAATTGATGCCATTATTGGTGTCAGTAACCTTGATAAGCGGTTGCACAGTACTTCCGGGCAGCAATATGTCGACGATGGGCAAAGACGTCATCAAACAGCAGGACGCTGATTTCGATCTCGACAAAATGGTGAATGTTTATCCGCTGACCCCGCGCCTGATTGACCAATTACGCCCACGCCCGAATGTAGCGCGCCCCAATATGACGCTGGAAAGTGAGATCGCGAATTACCAGTATCGCGTCGGGCCGGGGGACGTTCTTAATGTCACCGTCTGGGATCACCCGGAACTCACCACGCCAGCCGGTCAGTACCGCAGCTCCAGCGACACCGGCAACTGGGTACAGCCTGACGGCACTATGTTTTACCCGTATATCGGCAAGGTCCACGTAGTCGGGAAAACGCTCGCTGAAATCCGCAGTGATATTACCGGGCGCTTAGCGACGTACATCGCTGACCCGCAGGTGGACGTTAATATCGCCGCCTTCCGCTCACAAAAGGCCTATATCTCCGGTCAGGTGAATAAATCCGGTCAACAGGCGATCACCAACGTGCCACTGACTATTCTCGACGCCATCAACGCCGCAGGTGGCCTGACCGACACCGCTGACTGGCGCAACGTGGTGCTAACACACAATGGTCGTGAAGAGCGCATTTCTTTGCAGGCGCTGATGCAAAACGGCGACCTCAACCAGAATCGCCTGCTTTACCCCGGCGATATTCTCTACGTGCCACGTAATGATGATCTGAAAGTATTTGTGATGGGTGAAGTGAAGAAACAGAGCACCCTGAAAATGGACTTTAGCGGCATGACCCTGACTGAAGCCCTGGGCAATGCTGAAGGCATCGACATGACCACCTCCAACGCCAGCGGCATCTTTGTCATTCGTCCGCTGAAAGGCGAGGGCGGGCGTAACGGCAAGATTGCCAATATCTACCAGCTGGATATGTCCGATGCCACGTCGCTGGTGATGGCGACAGAATTCCGCCTGCAACCTTATGACGTGGTGTATGTCACCACCGCCCCGGTTTCCCGCTGGAACCGTCTGATCAATCAGTTGCTGCCAACTATTAGCGGTGTCCGTTACATGACGGATACAGCCAGCGACATTCATAACTGGTAA", - "dna_sequence_length": 1140, - "functions": [ - "colanic acid export protein", - "outer membrane auxillary lipoprotein" - ], - "id": "CDS_2047", - "location": [ - [ - "NC_000913", - 2137243, - "-", - 1140 - ] - ], - "md5": "556fb9764399563e12264f90733b720b", - "parent_gene": "", - "protein_md5": "fbf2c72bb12d39b5535a3321e981738d", - "protein_translation": "MMKSKMKLMPLLVSVTLISGCTVLPGSNMSTMGKDVIKQQDADFDLDKMVNVYPLTPRLIDQLRPRPNVARPNMTLESEIANYQYRVGPGDVLNVTVWDHPELTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQVDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTILDAINAAGGLTDTADWRNVVLTHNGREERISLQALMQNGDLNQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGMTLTEALGNAEGIDMTTSNASGIFVIRPLKGEGGRNGKIANIYQLDMSDATSLVMATEFRLQPYDVVYVTTAPVSRWNRLINQLLPTISGVRYMTDTASDIHNW", - "protein_translation_length": 379, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2063" - ], - [ - "gene_synonym", - "GeneID:946566" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76389" - ], - [ - "gene_synonym", - "ECK2057" - ], - [ - "gene_synonym", - "NP_416567.4" - ], - [ - "gene_synonym", - "yegH" - ], - [ - "gene_synonym", - "ASAP:ABE-0006830" - ], - [ - "gene_synonym", - "GI:90111378" - ], - [ - "gene_synonym", - "JW5336" - ], - [ - "gene_synonym", - "EcoGene:EG14051" - ] - ], - "dna_sequence": "ATGGAATGGATTGCCGATCCGTCTATCTGGGCCGGGTTAATCACGCTGATTGTGATCGAACTGGTCCTCGGCATTGATAACCTGGTCTTTATTGCCATCCTCGCCGAAAAACTACCGCCGAAGCAGCGTGACCGCGCACGGGTTACCGGGCTGCTGCTGGCAATGTTAATGCGCCTGTTACTGCTGGCGTCAATCTCCTGGCTGGTCACCCTGACTCAACCGCTGTTCAGCTTCCGCTCGTTTACCTTTAGCGCCCGCGACTTAATCATGCTGTTTGGTGGTTTCTTCCTGTTGTTCAAAGCCACGATGGAGCTGAACGAACGGCTGGAAGGGAAAGACAGCAATAATCCCACACAACGCAAAGGTGCGAAGTTCTGGGGCGTGGTGACGCAAATTGTGGTACTGGACGCCATTTTCTCACTCGACTCAGTGATTACCGCCGTCGGGATGGTCGACCATTTACTGGTCATGATGGCCGCCGTGGTTATCGCTATCAGCCTGATGTTGATGGCCAGCAAGCCGTTAACGCAATTTGTTAACAGTCACCCGACGATCGTTATTCTCTGCTTAAGCTTCCTGTTGATGATTGGCTTTAGCCTGGTGGCAGAAGGTTTCGGCTTCGTCATTCCGAAAGGCTACCTGTACGCTGCCATTGGTTTCTCGGTGATGATCGAGGCGCTCAATCAGTTGGCTATCTTTAACCGGCGACGTTTTCTTTCCGCTAACCAGACGCTGCGCCAGCGGACTACCGAAGCGGTAATGCGCCTGCTTAGCGGGCAAAAAGAAGATGCGGAACTGGACGCCGAAACCGCGTCCATGCTGGTGGATCATGGTAACCAGCAGATCTTTAATCCGCAGGAACGGCGGATGATTGAGCGGGTACTTAATCTTAACCAGCGTACCGTCAGCAGCATTATGACGTCGCGCCACGATATTGAGCATATCGATCTCAACGCGCCGGAAGAAGAAATCCGCCAGTTGCTGGAGCGAAATCAGCATACGCGGCTGGTGGTTACCGACGGTGATGACGCAGAAGATTTGCTCGGTGTTGTTCACGTTATCGACCTGCTACAACAGTCTCTGCGCGGCGAACCGCTCAACCTGCGGGTGTTGATTCGCCAGCCGCTGGTGTTCCCGGAAACCTTGCCGTTGTTACCTGCCCTGGAGCAGTTCCGTAATGCCCGCACGCACTTTGCTTTTGTGGTGGATGAGTTTGGCTCGGTGGAAGGGATTGTGACATTAAGTGACGTCACTGAAACCATTGCCGGTAACTTACCGAACGAAGTGGAAGAGATCGACGCCCGCCATGATATTCAGAAGAATGCGGACGGTTCCTGGACGGCGAATGGTCATATGCCGCTGGAGGATCTGGTGCAATATGTGCCGCTGCCGCTGGATGAAAAACGTGAATATCACACCATTGCCGGGCTGTTGATGGAGTATTTGCAGCGTATTCCAAAACCTGGCGAAGAAGTTCAGGTGGGGGATTATTTGCTTAAAACGTTGCAGGTAGAAAGCCATCGCGTGCAGAAGGTGCAGATTATACCGCTGCGTAAGGATGGCGAGATGGAGTACGAGGTGTGA", - "dna_sequence_length": 1584, - "functions": [ - "inner membrane protein" - ], - "id": "CDS_2048", - "location": [ - [ - "NC_000913", - 2137902, - "+", - 1584 - ] - ], - "md5": "908a01328ba4f6e5980840bd232a8fde", - "parent_gene": "", - "protein_md5": "62009d054fa9d9d2b578f39a5ba878fb", - "protein_translation": "MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRDRARVTGLLLAMLMRLLLLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKATMELNERLEGKDSNNPTQRKGAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAAVVIAISLMLMASKPLTQFVNSHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAIGFSVMIEALNQLAIFNRRRFLSANQTLRQRTTEAVMRLLSGQKEDAELDAETASMLVDHGNQQIFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEEEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLNLRVLIRQPLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDARHDIQKNADGSWTANGHMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPKPGEEVQVGDYLLKTLQVESHRVQKVQIIPLRKDGEMEYEV", - "protein_translation_length": 527, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2049" - ], - [ - "gene_synonym", - "NP_416568.1" - ], - [ - "gene_synonym", - "yegA" - ], - [ - "gene_synonym", - "GeneID:946582" - ], - [ - "gene_synonym", - "b2064" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28249" - ], - [ - "gene_synonym", - "ECK2058" - ], - [ - "gene_synonym", - "ASAP:ABE-0006833" - ], - [ - "gene_synonym", - "asmA" - ], - [ - "gene_synonym", - "GI:16130004" - ], - [ - "gene_synonym", - "EcoGene:EG11361" - ] - ], - "dna_sequence": "ATGAGACGATTTCTGACGACGCTGATGATACTCCTGGTCGTGCTGGTGGCCGGGTTATCTGCGTTAGTGTTGCTGGTGAATCCGAATGATTTCCGCGACTATATGGTCAAGCAAGTTGCTGCACGTAGCGGTTATCAATTGCAGCTCGACGGGCCACTGCGTTGGCACGTCTGGCCGCAGCTTAGTATCCTCTCCGGGCGAATGTCTCTCACCGCCCAGGGCGCAAGCCAGCCACTGGTTCGCGCCGACAACATGCGTCTGGACGTGGCGCTTTTACCACTACTGAGTCATCAACTGAGCGTTAAGCAGGTGATGCTAAAAGGGGCAGTGATCCAACTGACGCCGCAGACGGAAGCGGTGCGCAGTGAAGACGCTCCGGTTGCACCGCGCGACAATACCTTGCCGGATCTGTCAGACGATCGCGGATGGTCGTTTGATATATCCAGTCTTAAGGTGGCGGACAGCGTGCTGGTGTTCCAGCATGAAGATGACGAGCAGGTGACAATCCGCAATATTCGCCTGCAAATGGAACAAGATCCCCAACATCGTGGTTCATTTGAGTTCTCCGGGCGGGTTAATCGCGATCAGCGCGATCTCACGATATCCCTTAACGGTACGGTAGATGCTTCTGATTATCCGCATGATTTAACGGCGGCTATTGAACAAATTAACTGGCAGTTGCAGGGTGCCGATTTACCAAAACAAGGTATTCAGGGGCAGGGGAGTTTCCAGGCCCAGTGGCAGGAGTCACATAAACGCCTTTCATTTAACCAAATTAGTTTGACCGCCAATGATAGTACGCTAAGCGGGCAAGCACAGGTTACGCTGACAGAGAAACCGGAATGGCAGCTGAGGCTGCAATTCCCGCAACTGAATCTTGACAACCTCATCCCGCTTAATGAAACCGCGAATGGTGAAAACGGTGCCGCGCAGCAGGGGCAGAGCCAATCAACGTTGCCGCGCCCGGTCATTTCTTCGCGTATTGATGAACCGGCCTATCAGGGACTGCAAGGCTTTACGGCTGATATTTTGTTGCAGGCCAGTAACGTGCGCTGGCGCGGAATGAATTTTACAGATGTTGCCACGCAAATGACCAACAAGTCGGGTTTGCTGGAAATTACTCAACTGCAGGGCAAACTTAACGGTGGACAGGTTTCACTGCCGGGCACGCTGGACGCGACATCAATAAATCCGCGGATAAACTTCCAGCCACGGCTGGAAAACGTTGAGATTGGTACCATTCTGAAGGCGTTTAACTATCCGATTTCGTTGACCGGAAAAATGTCACTGGCTGGTGATTTCTCCGGTGCTGACATAGATGCCGACGCATTCCGCCACAACTGGCAAGGACAGGCACATGTCGAAATGACCGACACGCGCATGGAAGGGATGAACTTCCAGCAGATGATTCAGCAAGCGGTAGAGCGTAATGGCGGTGATGTGAAGGCCGCTGAAAACTTTGATAACGTGACGCGGCTTGACCGCTTTACCACCGATTTGACGTTGAAGGATGGCGTCGTGACGTTAAACGACATGCAAGGTCAATCGCCTGTGCTGGCGCTGACAGGGGAAGGCATGTTGAATCTGGCAGATCAAACCTGCGACACCCAGTTTGATATTCGGGTCGTGGGTGGCTGGAACGGGGAAAGCAAACTGATTGATTTCCTGAAAGAAACGCCAGTACCGCTGCGGGTTTATGGCAACTGGCAGCAACTCAATTACAGCCTGCAAGTGGATCAGTTACTGCGCAAACATCTACAGGACGAAGCGAAACGTCGCCTGAATGACTGGGCCGAGCGGAATAAAGATTCCCGTAATGGCAAAGATGTGAAGAAGTTGCTGGAGAAGATGTAG", 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"MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRDYMVKQVAARSGYQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVKQVMLKGAVIQLTPQTEAVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQHEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTAAIEQINWQLQGADLPKQGIQGQGSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTLTEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQGLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGQVSLPGTLDATSINPRINFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQGQAHVEMTDTRMEGMNFQQMIQQAVERNGGDVKAAENFDNVTRLDRFTTDLTLKDGVVTLNDMQGQSPVLALTGEGMLNLADQTCDTQFDIRVVGGWNGESKLIDFLKETPVPLRVYGNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM", - "protein_translation_length": 617, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130005" - ], - [ - "gene_synonym", - "GeneID:946593" - ], - [ - "gene_synonym", - "paxA" - ], - [ - "gene_synonym", - "b2065" - ], - [ - "gene_synonym", - "ECK2059" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28248" - ], - [ - "gene_synonym", - "dcd" - ], - [ - "gene_synonym", - "ASAP:ABE-0006835" - ], - [ - "gene_synonym", - "NP_416569.1" - ], - [ - "gene_synonym", - "dus" - ], - [ - "gene_synonym", - "EcoGene:EG11418" - ], - [ - "gene_synonym", - "JW2050" - ] - ], - "dna_sequence": "ATGCGTCTGTGTGACCGAGATATTGAAGCCTGGCTTGATGAAGGCCGTTTGTCGATCAACCCACGTCCGCCAGTGGAGCGTATTAACGGCGCGACGGTGGATGTACGCCTGGGCAATAAATTTCGTACCTTCCGTGGTCACACGGCAGCGTTTATCGATCTGAGCGGTCCCAAAGATGAAGTGAGCGCCGCGCTTGACCGCGTGATGAGCGATGAGATCGTTCTCGACGAGGGCGAGGCGTTCTATCTTCACCCAGGAGAGCTGGCGCTGGCGGTGACGCTGGAGTCGGTGACGCTGCCAGCCGATCTGGTGGGCTGGCTGGACGGGCGTTCCTCACTGGCGCGTCTGGGGCTGATGGTGCACGTCACCGCGCACCGCATCGATCCGGGCTGGTCTGGTTGCATTGTGCTGGAGTTCTACAACTCCGGTAAGCTGCCGCTGGCGCTGCGTCCGGGCATGTTAATTGGTGCGCTGAGCTTTGAGCCGCTTTCCGGCCCGGCGGTGCGACCTTACAACCGCCGTGAAGATGCGAAATATCGCAACCAGCAGGGCGCGGTAGCCAGCCGAATCGATAAAGACTAA", - "dna_sequence_length": 582, - "functions": [ - "deoxycytidine triphosphate deaminase", - "dCTP deaminase" - ], - "id": "CDS_2050", - "location": [ - [ - "NC_000913", - 2142215, - "-", - 582 - ] - ], - "md5": "bf30b426a84a905eefe1f7530f144a6f", - "parent_gene": "", - "protein_md5": "8a301baeeee3e6cfdcba5b42bf1de626", - "protein_translation": "MRLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTFRGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPADLVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSFEPLSGPAVRPYNRREDAKYRNQQGAVASRIDKD", - "protein_translation_length": 193, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416570.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0006840" - ], - [ - "gene_synonym", - "ECK2060" - ], - [ - "gene_synonym", - "b2066" - ], - [ - "gene_synonym", - "GeneID:946597" - ], - [ - "gene_synonym", - "JW2051" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8F4" - ], - [ - "gene_synonym", - "GI:90111379" - ], - [ - "gene_synonym", - "udk" - ], - [ - "gene_synonym", - "EcoGene:EG11701" - ] - ], - "dna_sequence": "ATGACTGATCAGTCTCATCAGTGCGTCATTATCGGTATCGCTGGCGCATCGGCTTCCGGCAAGAGTCTTATTGCCAGTACCCTTTATCGTGAATTGCGTGAGCAAGTCGGTGATGAACACATCGGCGTAATTCCCGAAGACTGCTATTACAAAGATCAAAGCCATCTGTCGATGGAAGAACGCGTTAAGACCAACTACGACCATCCCAGCGCGATGGATCACAGTCTGCTGCTTGAGCATTTACAAGCGTTGAAACGCGGCTCGGCAATTGACCTGCCGGTTTACAGCTATGTTGAACATACGCGTATGAAAGAAACGGTGACGGTTGAGCCGAAGAAGGTCATCATTCTCGAAGGCATTTTGTTGCTGACGGATGCGCGTTTGCGTGACGAACTTAACTTCTCCATTTTCGTTGATACCCCGCTGGATATCTGCCTGATGCGCCGCATCAAGCGTGACGTTAACGAGCGTGGGCGTTCAATGGATTCAGTGATGGCGCAATATCAAAAAACCGTGCGCCCGATGTTCCTGCAATTCATTGAGCCTTCTAAACAATATGCGGACATTATCGTGCCGCGCGGCGGGAAAAACCGCATCGCGATCGATATATTGAAAGCGAAAATAAGTCAGTTCTTTGAATAA", - "dna_sequence_length": 642, - "functions": [ - "uridine/cytidine kinase" - ], - "id": "CDS_2051", - "location": [ - [ - "NC_000913", - 2142948, - "-", - 642 - ] - ], - "md5": "353b84c8fdccba52a0bcafd4d8b13a73", - "parent_gene": "", - "protein_md5": "4ed5676e1b1bfa82b39a8a407f81fffd", - "protein_translation": "MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHSLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE", - "protein_translation_length": 213, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130007" - ], - [ - "gene_synonym", - "b2067" - ], - [ - "gene_synonym", - "ECK2061" - ], - [ - "gene_synonym", - "yegE" - ], - [ - "gene_synonym", - "ASAP:ABE-0006845" - ], - [ - "gene_synonym", - "JW2052" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38097" - ], - [ - "gene_synonym", - "NP_416571.1" - ], - [ - "gene_synonym", - "EcoGene:EG12396" - ], - [ - "gene_synonym", - "GeneID:946600" - ] - ], - "dna_sequence": "ATGAGCAAACAATCACAGCATGTATTAATTGCCCTGCCCCACCCGCTGCTTCACCTGGTCAGTTTAGGTTTAGTCTCGTTTATCTTTACCCTTTTCTCGCTTGAGCTTTCGCAGTTTGGCACCCAACTCGCCCCACTGTGGTTCCCGACGTCCATCATGATGGTGGCGTTTTATCGCCATGCCGGGCGCATGTGGCCGGGAATTGCGCTGAGCTGTTCGCTGGGAAATATCGCCGCATCCATCCTGCTTTTTTCCACCAGCTCGCTGAACATGACCTGGACGACCATCAATATTGTTGAAGCCGTGGTCGGGGCAGTGCTGCTACGTAAATTGCTGCCGTGGTATAACCCCTTGCAAAATCTGGCTGACTGGCTGCGTCTGGCACTCGGCAGCGCCATTGTTCCGCCTCTGTTGGGGGGTGTTCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCTGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTGTATCTGCCGTGGCCTTTTACTTTCATTATTGTGCTGTTGATGTGGAGCGCCGTGCGTCTGCCACGAATGGAAGCCTTTTTGATCTTCCTTACCACGGTGATGATGGTGTCGCTGATGATGGCCGCGGATCCCTCCCTGCTTGCTACGCCGCGTACGTACCTGATGAGCCATATGCCGTGGCTACCGTTTTTGCTGATCCTGCTGCCCGCCAACATCATGACCATGGTGATGTATGCCTTTCGTGCGGAACGCAAACACATTTCCGAAAGCGAAACCCACTTTCGGAACGCGATGGAATATTCCGCTATCGGTATGGCGTTAGTGGGCACCGAGGGACAATGGCTGCAAACCAACAAAGCGCTCTGCCAGTTTCTCGGGTACAGTCAGGAAGAGCTGCGCGGACTCACCTTTCAGCAACTGACCTGGCCGGAGGATCTCAATAAAGATCTCCAACAGGTTGAAAAGCTGATAAGCGGTGAAATAAACACCTATTCAATGGAAAAACGCTACTACAACCGCAATGGCGATGTTGTCTGGGCGTTGCTTGCCGTCTCACTGGTGCGCCACACGGATGGCACGCCGCTCTATTTTATCGCTCAGATTGAAGACATTAACGAGCTAAAACGCACCGAACAGGTCAATCAGCAACTGATGGAGCGCATCACTCTGGCTAACGAAGCGGGCGGGATTGGCATCTGGGAGTGGGAGTTGAAGCCGAATATTTTTAGCTGGGATAAGCGGATGTTCGAGCTGTATGAAATTCCTCCACATATCAAACCGAACTGGCAGGTGTGGTACGAGTGCGTGCTGCCGGAAGATCGCCAGCATGCCGAAAAAGTGATTCGTGATTCGTTGCAATCACGCTCGCCCTTTAAACTGGAATTTCGCATTACCGTAAAAGACGGTATTCGCCATATCCGCGCCCTCGCCAACCGGGTACTGAATAAAGAAGGCGAAGTCGAACGTCTCCTCGGCATCAATATGGATATGACCGAAGTGAAACAGCTTAACGAGGCATTGTTTCAGGAAAAAGAGCGCCTGCACATTACGCTTGATTCCATCGGTGAAGCCGTGGTCTGTATTGATATGGCGATGAAAATTACCTTTATGAATCCAGTGGCGGAGAAGATGAGCGGCTGGACGCAGGAAGAAGCGTTAGGTGTTCCGCTCCTGACGGTGTTGCATATTACTTTTGGCGACAACGGACCATTAATGGAGAACATTTACAGTGCCGACACCTCACGTTCCGCGATCGAGCAAGATGTGGTGTTGCACTGTCGGAGCGGCGGCAGTTACGACGTGCATTACAGTATTACGCCGTTAAGTACTCTGGACGGCAGCAATATTGGTTCGGTTCTGGTGATTCAGGACGTTACCGAATCACGCAAAATGCTGCGCCAGCTGAGCTACAGCGCCTCCCATGATGCACTGACGCATCTCGCCAACCGCGCCAGTTTTGAGAAACAACTGCGTATCCTGCTGCAAACGGTAAACAGTACACATCAGCGACATGCCCTGGTGTTTATCGATCTTGATCGCTTTAAAGCGGTGAATGACAGCGCCGGGCATGCGGCGGGTGACGCTTTGCTGCGCGAACTGGCGTCGTTAATGCTGAGTATGCTGCGTTCCAGCGACGTGCTGGCGCGACTCGGTGGGGATGAATTTGGTCTGCTGCTACCAGACTGTAATGTTGAAAGCGCGCGTTTTATCGCTACACGCATTATCAGTGCCGTGAATGACTATCACTTTATATGGGAAGGCCGTGTGCATCGGGTAGGTGCCAGTGCCGGGATTACCTTGATTGATGACAACAATCATCAGGCGGCAGAAGTGATGTCGCAGGCTGATATCGCCTGTTATGCCTCCAAAAATGGTGGCCGGGGCCGGGTGACGGTTTACGAACCGCAGCAAGCTGCCGCACATAGCGAACGGGCGGCGATGTCGCTTGATGAACAGTGGCGGATGATTAAAGAGAATCAGTTGATGATGCTCGCCCACGGTGTCGCTTCGCCACGGATCCCGGAAGCGCGTAATTTGTGGCTGATTTCACTTAAGCTCTGGAGTTGCGAAGGCGAGATTATTGATGAACAAACATTTCGTCGTAGCTTCAGCGATCCGGCGCTTAGCCATGCTCTTGACCGCCGGGTATTCCACGAATTTTTCCAGCAGGCCGCAAAAGCGGTTGCCAGTAAAGGCATAAGCATCTCCCTCCCCCTTTCCGTTGCCGGTTTGAGTAGCGCCACGCTGGTGAATGATCTGCTTGAGCAGCTGGAAAATAGCCCTCTACCACCACGGTTATTACATCTGATTATTCCGGCTGAAGCGATTTTAGATCACGCAGAAAGCGTGCAAAAACTGCGGCTGGCGGGATGTCGGATAGTGCTCAGCCAGGTGGGCCGCGATCTGCAAATCTTCAACTCGCTGAAAGCGAATATGGCAGATTACCTGCTACTTGATGGTGAGTTATGCGCCAACGTGCAGGGTAATTTGATGGATGAGATGCTGATTACGATTATTCAGGGGCACGCTCAGCGACTCGGGATGAAAACCATCGCCGGGCCAGTCGTTTTACCCTTAGTGATGGATACGCTTTCTGGCATCGGCGTCGATCTGATTTATGGTGAGGTGATTGCCGATGCCCAACCGCTGGATTTGCTGGTGAATAGTAGTTATTTCGCGATTAACTGA", - "dna_sequence_length": 3318, - "functions": [ - "putative diguanylate cyclase" - ], - "id": "CDS_2052", - "location": [ - [ - "NC_000913", - 2143266, - "+", - 3318 - ] - ], - "md5": "81815025df1c65914908bfd3b83f2282", - "parent_gene": "", - "protein_md5": "40b4eda7b2f47553c6a1291968c00527", - "protein_translation": "MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFAIN", - "protein_translation_length": 1105, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04395" - ], - [ - "gene_synonym", - "aidA" - ], - [ - "gene_synonym", - "EcoGene:EG11222" - ], - [ - "gene_synonym", - "ECK2062" - ], - [ - "gene_synonym", - "JW2053" - ], - [ - "gene_synonym", - "ASAP:ABE-0006848" - ], - [ - "gene_synonym", - "b2068" - ], - [ - "gene_synonym", - "GI:16130008" - ], - [ - "gene_synonym", - "NP_416572.1" - ], - [ - "gene_synonym", - "alkA" - ], - [ - "gene_synonym", - "GeneID:947371" - ] - ], - "dna_sequence": "ATGTATACCCTGAACTGGCAGCCGCCGTATGACTGGTCGTGGATGTTGGGATTTCTCGCCGCCCGTGCGGTGAGCAGTGTGGAAACGGTCGCGGACAGTTATTATGCCCGTAGTCTGGCGGTGGGCGAATATCGCGGCGTGGTGACTGCTATTCCGGATATAGCCCGCCATACTCTGCACATAAATTTAAGTGCAGGTTTAGAACCTGTTGCCGCAGAGTGTCTGGCGAAAATGAGCCGCCTGTTTGATCTGCAATGTAACCCACAAATTGTTAACGGTGCGTTGGGCAGGTTAGGCGCGGCGCGGCCCGGATTGCGTTTACCCGGCTGTGTTGATGCTTTTGAGCAGGGCGTGCGGGCGATTTTAGGCCAACTGGTGAGCGTGGCGATGGCGGCAAAATTGACCGCCAGAGTGGCACAGCTTTATGGCGAACGGCTGGATGATTTTCCGGAGTATATCTGCTTCCCGACGCCTCAGCGGCTGGCAGCAGCAGACCCGCAGGCATTAAAAGCGTTAGGTATGCCGTTGAAACGGGCAGAGGCGCTGATTCATCTGGCAAATGCGGCGCTGGAGGGCACCTTACCAATGACAATACCGGGCGATGTGGAGCAGGCGATGAAAACGCTGCAAACTTTTCCGGGTATCGGGCGCTGGACGGCGAATTATTTTGCTTTGCGTGGCTGGCAGGCGAAAGATGTTTTCCTGCCGGATGATTATCTGATTAAACAGCGATTTCCGGGAATGACACCGGCGCAAATCCGCCGTTATGCCGAGCGCTGGAAGCCCTGGCGTTCTTATGCGCTGTTGCATATCTGGTATACGGAAGGCTGGCAACCAGACGAAGCATGA", - "dna_sequence_length": 849, - "functions": [ - "3-methyl-adenine DNA glycosylase II" - ], - "id": "CDS_2053", - "location": [ - [ - "NC_000913", - 2147540, - "-", - 849 - ] - ], - "md5": "b911ef381b62ab94a73dcb148398e593", - "parent_gene": "", - "protein_md5": "3c91311e90e18c90f19322863839383f", - "protein_translation": "MYTLNWQPPYDWSWMLGFLAARAVSSVETVADSYYARSLAVGEYRGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGRLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMPLKRAEALIHLANAALEGTLPMTIPGDVEQAMKTLQTFPGIGRWTANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEGWQPDEA", - "protein_translation_length": 282, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006856" - ], - [ - "gene_synonym", - "ECK2063" - ], - [ - "gene_synonym", - "b2069" - ], - [ - "gene_synonym", - "yegD" - ], - [ - "gene_synonym", - "JW2054" - ], - [ - "gene_synonym", - "EcoGene:EG12200" - ], - [ - "gene_synonym", - "NP_416573.4" - ], - [ - "gene_synonym", - "GeneID:947234" - ], - [ - "gene_synonym", - "GI:90111380" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36928" - ] - ], - "dna_sequence": "GTGTTTATTGGTTTTGATTACGGTACAGCAAACTGTTCAGTGGCGGTCATGCGTGACGGTAAACCGCATTTGCTAAAAATGGAAAACGACAGCACGCTGCTGCCTTCAATGCTTTGCGCGCCAACGCGTGAAGCGGTAAGCGAATGGCTGTACCGCCATCATGATGTTCCGGCAGACGACGATGAAACGCAGGCGCTGTTACGTCGGGCGATTCGTTATAACCGCGAAGAAGATATCGATGTTACGGCGAAAAGCGTGCAGTTCGGTCTTTCCTCACTGGCACAGTACATTGATGATCCAGAAGAAGTGTGGTTTGTGAAATCACCAAAATCGTTCCTCGGTGCCAGCGGCTTAAAACCGCAGCAGGTAGCGCTGTTTGAGGATCTGGTCTGCGCAATGATGTTGCACATTCGCCAGCAGGCGCAGGCACAGCTGCCAGAAGCGATTACTCAGGCGGTGATTGGTCGTCCGATCAACTTCCAGGGGCTGGGCGGTGATGAAGCAAACACCCAGGCGCAAGGGATTCTGGAACGCGCGGCGAAGCGTGCCGGATTCAGGGACGTGGTATTCCAGTACGAGCCGGTCGCGGCTGGGCTGGATTACGAAGCCACCTTGCAGGAAGAAAAACGGGTGCTGGTGGTGGATATCGGCGGTGGTACGACTGACTGTTCATTGCTGCTGATGGGGCCGCAGTGGCGTTCGCGTCTCGATCGTGAAGCCAGCCTGCTGGGTCACAGTGGTTGCCGTATTGGCGGTAACGATCTGGATATCGCGCTGGCGTTTAAAAACCTGATGCCACTGCTGGGTATGGGTGGCGAAACCGAAAAAGGCATCGCCCTGCCGATCCTGCCGTGGTGGAATGCGGTTGCCATCAACGACGTACCTGCGCAGAGTGATTTCTACAGTAGTGCCAACGGTCGTCTGCTTAACGATCTGGTACGCGATGCCCGCGAACCGGAAAAAGTGGCCCTGTTACAGAAAGTCTGGCGTCAGCGTTTAAGCTATCGCCTGGTGCGTAGCGCAGAAGAGTGCAAAATTGCTCTTTCAAGCGTAGCGGAAACCCGCGCCTCACTGCCGTTTATCAGCAATGAACTGGCTACGCTGATTAGCCAGCGAGGGCTGGAAAGCGCCCTCAGCCAGCCACTGACGCGGATTCTGGAACAGGTGCAACTGGCCCTGGATAACGCCCAGGAAAAACCGGACGTTATCTACCTGACCGGCGGTAGCGCCCGTTCTCCGCTGATTAAAAAAGCGCTGGCAGAACAGTTGCCGGGCATTCCGATTGCAGGCGGCGATGACTTTGGCTCCGTCACCGCCGGGCTGGCACGCTGGGCGGAAGTGGTGTTTCGTTAA", - "dna_sequence_length": 1353, - "functions": [ - "Hsp70 chaperone family protein" - ], - "id": "CDS_2054", - "location": [ - [ - "NC_000913", - 2147674, - "+", - 1353 - ] - ], - "md5": "95b8dba97d49d1c2c5b2218938760d30", - "parent_gene": "", - "protein_md5": "e801b53a18c7836a3462b201c1e4a71e", - "protein_translation": "MFIGFDYGTANCSVAVMRDGKPHLLKMENDSTLLPSMLCAPTREAVSEWLYRHHDVPADDDETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEEVWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINFQGLGGDEANTQAQGILERAAKRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGGGTTDCSLLLMGPQWRSRLDREASLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEKGIALPILPWWNAVAINDVPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKVWRQRLSYRLVRSAEECKIALSSVAETRASLPFISNELATLISQRGLESALSQPLTRILEQVQLALDNAQEKPDVIYLTGGSARSPLIKKALAEQLPGIPIAGGDDFGSVTAGLARWAEVVFR", - "protein_translation_length": 450, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2064" - ], - [ - "gene_synonym", - "GI:16130010" - ], - [ - "gene_synonym", - "yegI" - ], - [ - "gene_synonym", - "b2070" - ], - [ - "gene_synonym", - "ASAP:ABE-0006858" - ], - [ - "gene_synonym", - "NP_416574.1" - ], - [ - "gene_synonym", - "JW2055" - ], - [ - "gene_synonym", - "EcoGene:EG14052" - ], - [ - "gene_synonym", - "GeneID:947159" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76393" - ] - ], - "dna_sequence": "ATGAAAACAAATATAAAAGTATTTACATCGACAGGTGAATTGACCACTCTTGGCCGTGAACTGGGCAAAGGTGGTGAAGGCGCGGTTTATGATATCGAGGAGTTTGTCGATAGCGTCGCCAAGATTTATCACACGCCGCCACCCGCCTTAAAACAGGACAAACTTGCCTTTATGGCTGCGACAGCTGACGCGCAGTTGTTGAATTATGTCGCCTGGCCGCAGGCAACGCTTCACGGTGGACGAGGCGGAAAAGTTATCGGTTTTATGATGCCAAAAGTTTCTGGTAAAGAACCGATTCATATGATCTATAGCCCGGCACATCGTCGCCAGAGTTACCCTCATTGTGCGTGGGATTTTCTACTCTATGTTGCGCGCAATATTGCTTCATCTTTTGCTACGGTTCACGAGCACGGGCACGTCGTGGGTGACGTAAACCAGAACAGTTTTATGGTAGGTCGCGACAGCAAAGTGGTACTGATTGATAGCGACTCCTTTCAAATTAACGCCAATGGCACACTGCATTTATGCGAAGTCGGCGTGTCGCATTTTACGCCGCCAGAGCTACAAACCTTGCCATCATTTGTCGGTTTTGAACGCACAGAAAATCACGATAATTTTGGCCTTGCGTTGCTAATTTTTCACGTCTTGTTTGGTGGGCGGCATCCTTATTCTGGTGTGCCGCTTATCTCTGATGCGGGTAATGCGCTGGAGACGGATATTACCCATTTCCGTTATGCCTACGCGTCAGATAATCAGCGACGTGGTTTAAAACCGCCGCCACGATCTATTCCGCTATCGATGTTACCGAGTGATGTTGAAGCCATGTTTCAGCAGGCATTCACGGAAAGTGGCGTGGCAACCGGGCGTCCGACGGCTAAAGCGTGGGTAGCGGCACTGGACTCTCTACGCCAACAGTTAAAGAAATGTATCGTTTCAGCAATGCATGTTTACCCCGCTCATTTGACTGACTGCCCGTGGTGTGCGCTGGATAATCAAGGTGTTATCTATTTTATTGATCTCGGCGAAGAGGTCATTACCACCGGCGGGAATTTTGTGCTGGCGAAAGTCTGGGCGATGGTGATGGCGTCAGTAGCACCGCCAGCATTGCAACTGCCATTACCCGATCATTTCCAACCGACTGGCAGGCCGCTTCCTTTAGGCCTGTTACGGCGCGAATACATCATTCTGCTTGAGATCGCACTGTCAGCATTATCGCTGCTGCTTTGCGGCCTTCAGGCAGAACCGCGTTATATTATTTTGGTTCCTGTGCTGGCGGCTATCTGGATTATTGGCAGTCTGACAAGCAAAGCGTACAAAGCAGAAGTTCAGCAACGCCGTGAGGCATTTAATCGTGCGAAAATGGACTATGACCATTTAGTCCGCCAGATCCAGCAGGTAGGCGGCCTGGAAGGTTTTATCGCCAAACGGACGATGCTCGAAAAAATGAAGGACGAAATTCTCGGGTTACCGGAAGAAGAGAAACGCGCTCTGGCAGCACTTCATGACACTGCAAGGGAACGGCAGAAGCAGAAGTTTCTGGAGGGATTTTTTATTGATGTTGCCTCTATTCCCGGCGTTGGCCCTGCGCGTAAAGCGGCGTTACGGTCTTTTGGTATTGAAACAGCCGCAGATGTTACCCGTCGTGGCGTTAAGCAAGTGAAAGGGTTTGGCGACCATCTGACCCAGGCGGTTATCGACTGGAAAGCGAGCTGTGAACGCCGTTTTGTGTTCAGGCCGAATGAAGCGATAACGCCAGCAGACAGACAAGCGGTAATGGCGAAAATGACCGCCAAACGACATCGGCTGGAATCGGCGTTGACAGTCGGCGCGACAGAGTTGCAGCGATTCCGCCTTCATGCTCCAGCACGGACCATGCCGTTGATGGAACCGTTACGTCAGGCAGCAGAAAAACTGGCTCAGGCGCAGGCAGATTTAAGCCGCTGCTGA", - "dna_sequence_length": 1947, - "functions": [ - "protein kinase-related putative non-specific DNA-binding protein" - ], - "id": "CDS_2055", - "location": [ - [ - "NC_000913", - 2150985, - "-", - 1947 - ] - ], - "md5": "ccd62e468a246d529413035441462102", - "parent_gene": "", - "protein_md5": "1258d53d53716af93f43b0ee5ace03cd", - "protein_translation": "MKTNIKVFTSTGELTTLGRELGKGGEGAVYDIEEFVDSVAKIYHTPPPALKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDSDSFQINANGTLHLCEVGVSHFTPPELQTLPSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITHFRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAALDSLRQQLKKCIVSAMHVYPAHLTDCPWCALDNQGVIYFIDLGEEVITTGGNFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRREYIILLEIALSALSLLLCGLQAEPRYIILVPVLAAIWIIGSLTSKAYKAEVQQRREAFNRAKMDYDHLVRQIQQVGGLEGFIAKRTMLEKMKDEILGLPEEEKRALAALHDTARERQKQKFLEGFFIDVASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVIDWKASCERRFVFRPNEAITPADRQAVMAKMTAKRHRLESALTVGATELQRFRLHAPARTMPLMEPLRQAAEKLAQAQADLSRC", - "protein_translation_length": 648, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2065" - ], - [ - "gene_synonym", - "GI:16130011" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76394" - ], - [ - "gene_synonym", - "yegJ" - ], - [ - "gene_synonym", - "NP_416575.1" - ], - [ - "gene_synonym", - "JW2056" - ], - [ - "gene_synonym", - "b2071" - ], - [ - "gene_synonym", - "EcoGene:EG14053" - ], - [ - "gene_synonym", - "GeneID:947201" - ], - [ - "gene_synonym", - "ASAP:ABE-0006863" - ] - ], - "dna_sequence": "ATGAAAAAGATATTACTTATGTTGAGTCTGCTATTTTTTACTACCGCGGGCTTTAGTGAAGTTTCGGATACGTTAGTGACGGGAGGTTATGATAAACAAGCGATGTCTGACGCGATTAAACATGCGCGGAAAGAAACCGATAAATTCATCGAGGTTATGAATAAAAAAGATGCCGATACTTTCGCAGTCAAAGCCCCGATAACCGATCACGGAAGAACCGAGCATTTCTGGCTTACGGATGTCACTTATTCTAACGGCATGTTTATTGGCGTAATCAGCAATGACCCTGGTATTGTTACAAACGTAGAATATGGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGATGTATACGCGCGGGGATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAA", - "dna_sequence_length": 462, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2056", - "location": [ - [ - "NC_000913", - 2151185, - "+", - 462 - ] - ], - "md5": "1018bde5bccf4ef99069441836d9f8f2", - "parent_gene": "", - "protein_md5": "46a93d64cffcd850934b14e69b2d5f30", - "protein_translation": "MKKILLMLSLLFFTTAGFSEVSDTLVTGGYDKQAMSDAIKHARKETDKFIEVMNKKDADTFAVKAPITDHGRTEHFWLTDVTYSNGMFIGVISNDPGIVTNVEYGQEWKIKKEDISDWMYTRGDKIYGGYTIDPLLVTYPKEEADELRAKLVR", - "protein_translation_length": 153, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2066" - ], - [ - "gene_synonym", - "GI:16130012" - ], - [ - "gene_synonym", - "yegK" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76395" - ], - [ - "gene_synonym", - "JW2057" - ], - [ - "gene_synonym", - "b2072" - ], - [ - "gene_synonym", - "GeneID:947269" - ], - [ - "gene_synonym", - "ASAP:ABE-0006865" - ], - [ - "gene_synonym", - "NP_416576.1" - ], - [ - "gene_synonym", - "EcoGene:EG14054" - ] - ], - "dna_sequence": "GTGAGCTGGCGTCTGGTCTATGCATCAACCGTTGGAACGTCGCACATCAGCGCGGACTTGCCTTGTCAGGATGCCTGCCAGATGCAGATTGCCTGGTTAAATGACCAGCAGCCATTATTGTCGGTATTTGTCGCTGATGGCGCAGGCAGTGTCTCGCAGGGTGGCGAAGGCGCGATGCTCGCCGTCAATGAAGCGATGGCTTATATGTCGCAAAAAGTGCAGGGCGGGGAATTGGGGCTTAATGATGTCCTCGCCACAAATATGGTACTGACCATTCGTCAACGACTTTTTGCCGAGGCGGAAGCCAAAGAATTAGCGGTTCGCGATTTTGCCTGCACATTTCTGGGACTGATTTCATCGCCTGACGGCACCTTGATTATGCAGATTGGCGATGGCGGCGTGGTGGTAGATTTGGGTCACGGTCTGCAATTGCCTCTCACGCCGATGGCGGGTGAATATGCCAACATGACGCACTTCATTACCGACGAAGATGCCGTTTCCAGACTGGAAACTTTCACCAGCACTGGGCGTGCGCACAAAGTTGCAGCATTTACGGATGGTATCCAGCGACTGGCGTTAAATATGCTGGATAATTCTCCTCATGTGCCTTTCTTTACCCCGTTTTTCAATGGACTGGCGGCAGCAACGCAGGAACAACTCGATTTATTACCTGAATTGTTAAAGCAGTTTTTGTCCAGCCCGGCGGTAAACGAGCGTACGGATGATGATAAAACGTTGGCACTGGCGCTGTGGGCAGAGTGA", - "dna_sequence_length": 762, - "functions": [ - "ser/thr phosphatase-related protein" - ], - "id": "CDS_2057", - "location": [ - [ - "NC_000913", - 2152472, - "-", - 762 - ] - ], - "md5": "2c222aa7c62ae8fb1eb1fcf6d044338f", - "parent_gene": "", - "protein_md5": "2907c15901946981c6f735f5e7a25099", - "protein_translation": "MSWRLVYASTVGTSHISADLPCQDACQMQIAWLNDQQPLLSVFVADGAGSVSQGGEGAMLAVNEAMAYMSQKVQGGELGLNDVLATNMVLTIRQRLFAEAEAKELAVRDFACTFLGLISSPDGTLIMQIGDGGVVVDLGHGLQLPLTPMAGEYANMTHFITDEDAVSRLETFTSTGRAHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLAAATQEQLDLLPELLKQFLSSPAVNERTDDDKTLALALWAE", - "protein_translation_length": 253, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2058" - ], - [ - "gene_synonym", - "ECK2067" - ], - [ - "gene_synonym", - "GI:16130013" - ], - [ - "gene_synonym", - "GeneID:946602" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76396" - ], - [ - "gene_synonym", - "b2073" - ], - [ - "gene_synonym", - "ASAP:ABE-0006867" - ], - [ - "gene_synonym", - "NP_416577.1" - ], - [ - "gene_synonym", - "yegL" - ], - [ - "gene_synonym", - "EcoGene:EG14055" - ] - ], - "dna_sequence": "ATGAGCGAACAAATCACGTTTGCCACCAGCGATTTTGCCAGTAACCCGGAACCACGTTGCCCCTGCATTTTGCTGCTGGATGTTTCTGGTTCTATGAACGGTAGACCTATTAATGAACTTAACGCCGGATTGGTTACCTTTCGTGATGAACTGCTTGCTGATCCGCTGGCTTTAAAAAGAGTGGAACTCGGCATTGTGACGTTCGGCCCGGTGCATGTGGAACAACCCTTTACCAGCGCCGCTAATTTTTTTCCGCCCATCCTGTTTGCCCAGGGCGATACACCAATGGGTGCGGCCATTACCAAAGCCCTGGATATGGTAGAGGAGCGGAAACGTGAGTATCGTGCAAATGGTATTTCGTATTATCGCCCGTGGATTTTCCTGATTACCGATGGTGCACCAACCGATGAGTGGCAGGCTGCAGCCAACAAAGTGTTTCGGGGGGAAGAAGATAAAAGGTTTGCTTTCTTTTCCATCGGTGTTCAGGGGGCGGATATGAAGACGCTGGCACAAATTAGCGTTCGTCAGCCTTTGCCTCTGCAAGGATTACAATTCCGTGAACTGTTTAGCTGGTTATCCAGTTCGCTGCGTTCGGTTTCCCGCTCCACGCCGGGAACGGAAGTTGTGCTGGAAGCGCCAAAAGGCTGGACGTCAGTGTGA", - "dna_sequence_length": 660, - "functions": [ - "VMA domain protein" - ], - "id": "CDS_2058", - "location": [ - [ - "NC_000913", - 2153128, - "-", - 660 - ] - ], - "md5": "88c64cc24a021731188670cfaf30123e", - "parent_gene": "", - "protein_md5": "7f9153abb5309cb8bb3c4cc5b812f876", - "protein_translation": "MSEQITFATSDFASNPEPRCPCILLLDVSGSMNGRPINELNAGLVTFRDELLADPLALKRVELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITKALDMVEERKREYRANGISYYRPWIFLITDGAPTDEWQAAANKVFRGEEDKRFAFFSIGVQGADMKTLAQISVRQPLPLQGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTSV", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:7751625" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P607" - ], - [ - "gene_synonym", - "EcoGene:EG14472" - ], - [ - "gene_synonym", - "ibsA" - ], - [ - "gene_synonym", - "b4667" - ], - [ - "gene_synonym", - "GI:226524729" - ], - [ - "gene_synonym", - "ECK4482" - ], - [ - "gene_synonym", - "YP_002791247.1" - ] - ], - "dna_sequence": "ATGATGAAGCACGTCATCATACTGGTGATACTCTTAGTGATTAGCTTCCAGGCTTACTAA", - "dna_sequence_length": 60, - "functions": [ - "toxic membrane protein" - ], - "id": "CDS_2059", - "location": [ - [ - "NC_000913", - 2153408, - "-", - 60 - ] - ], - "md5": "a991fbee63088c9b5ab078f3f37aa0cb", - "parent_gene": "", - "protein_md5": "efda09d57f23a8060f054faea176517c", - "protein_translation": "MMKHVIILVILLVISFQAY", - "protein_translation_length": 19, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:7751626" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P608" - ], - [ - "gene_synonym", - "EcoGene:EG14473" - ], - [ - "gene_synonym", - "ibsB" - ], - [ - "gene_synonym", - "YP_002791248.1" - ], - [ - "gene_synonym", - "b4668" - ], - [ - "gene_synonym", - "ECK4483" - ], - [ - "gene_synonym", - "GI:226524730" - ] - ], - "dna_sequence": "ATGATGAAGCTACTCATCATCGTGGTGCTCTTAGTCATAAGCTTCCCCGCTTACTAA", - "dna_sequence_length": 57, - "functions": [ - "toxic membrane protein" - ], - "id": "CDS_2060", - "location": [ - [ - "NC_000913", - 2153737, - "-", - 57 - ] - ], - "md5": "47abdd2c4e5826a86ec5aeb2e1357bcd", - "parent_gene": "", - "protein_md5": "c72d4b5e79a7c8912e8be1d8d0c9c74e", - "protein_translation": "MMKLLIIVVLLVISFPAY", - "protein_translation_length": 18, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946604" - ], - [ - "gene_synonym", - "EcoGene:EG14056" - ], - [ - "gene_synonym", - "ECK2070" - ], - [ - "gene_synonym", - "b2074" - ], - [ - "gene_synonym", - "NP_416578.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76397" - ], - [ - "gene_synonym", - "yegM" - ], - [ - "gene_synonym", - "ASAP:ABE-0006872" - ], - [ - "gene_synonym", - "mdtA" - ], - [ - "gene_synonym", - "JW5338" - ], - [ - "gene_synonym", - "GI:90111381" - ] - ], - "dna_sequence": "ATGAAAGGTAGTTATAAATCCCGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCCCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAGGCGGCGACCGCCGTAGAACAGGCAGTTCCGCGTTACCTCACCGGGCTTGGCACCATTACCGCCGCTAATACCGTTACGGTGCGCAGCCGCGTGGACGGCCAACTGATAGCGTTACATTTCCAGGAAGGCCAGCAGGTCAAAGCAGGCGATTTACTGGCAGAAATTGACCCCAGCCAGTTCAAAGTTGCATTAGCACAAGCCCAGGGCCAACTGGCAAAAGATAAAGCCACGCTTGCCAACGCCCGCCGTGACCTGGCGCGTTATCAACAACTGGCAAAAACCAATCTCGTTTCCCGCCAGGAGCTGGATGCCCAACAGGCGCTGGTCAGTGAAACCGAAGGCACCATTAAGGCTGATGAAGCAAGCGTTGCCAGCGCGCAGCTGCAACTCGACTGGAGCCGGATTACCGCACCAGTCGATGGTCGCGTTGGTCTCAAGCAGGTTGATGTTGGTAACCAAATCTCCAGTGGTGATACCACCGGGATCGTGGTGATCACCCAGACGCATCCTATCGATTTAGTCTTTACCCTGCCGGAAAGCGATATCGCTACCGTAGTGCAGGCGCAGAAAGCCGGAAAACCGCTGGTGGTAGAAGCCTGGGATCGCACCAACTCGAAGAAATTAAGTGAAGGCACGCTGTTAAGTCTAGATAACCAAATCGATGCCACTACCGGTACGATTAAAGTGAAAGCACGCTTTAATAATCAGGATGATGCGCTGTTTCCCAATCAGTTTGTTAACGCGCGCATGTTAGTCGACACCGAACAAAACGCCGTAGTGATCCCAACAGCCGCCCTGCAAATGGGCAATGAAGGCCATTTTGTCTGGGTGCTGAATAGCGAAAACAAGGTCAGCAAACATCTGGTGACGCCGGGCATTCAGGACAGTCAGAAAGTGGTGATCCGTGCAGGTATTTCTGCGGGCGATCGCGTGGTGACAGACGGCATTGATCGCCTGACCGAAGGGGCGAAAGTGGAAGTGGTGGAAGCCCAGAGCGCCACTACTCCGGAAGAGAAAGCCACCAGCCGCGAATACGCGAAAAAAGGAGCACGCTCCTGA", - "dna_sequence_length": 1248, - "functions": [ - "multidrug efflux system, subunit A" - ], - "id": "CDS_2061", - "location": [ - [ - "NC_000913", - 2154016, - "+", - 1248 - ] - ], - "md5": "0a7df7c50ffe31212aabfffe6fd662f6", - "parent_gene": "", - "protein_md5": "adfe3857509e4ab9ab5809976226eb19", - "protein_translation": "MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSRSAAPGATKQAQQSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLIALHFQEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKVKARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVEAQSATTPEEKATSREYAKKGARS", - "protein_translation_length": 415, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130015" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76398" - ], - [ - "gene_synonym", - "ECK2071" - ], - [ - "gene_synonym", - "b2075" - ], - [ - "gene_synonym", - "yegN" - ], - [ - "gene_synonym", - "mdtB" - ], - [ - "gene_synonym", - "JW2060" - ], - [ - "gene_synonym", - "GeneID:946606" - ], - [ - "gene_synonym", - "NP_416579.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006874" - ], - [ - "gene_synonym", - "EcoGene:EG14057" - ] - ], - "dna_sequence": "ATGCAGGTGTTACCCCCGAGCAGCACAGGCGGCCCGTCGCGCCTGTTTATTATGCGTCCTGTGGCCACCACGCTGCTGATGGTGGCGATCTTACTCGCCGGGATTATCGGTTATCGCGCCCTGCCCGTTTCGGCGCTGCCGGAAGTGGACTATCCGACCATTCAGGTGGTCACGCTCTACCCAGGTGCCAGCCCGGATGTCATGACCTCTGCCGTTACCGCGCCGCTAGAACGCCAGTTCGGGCAGATGTCTGGCCTGAAACAGATGTCGTCGCAAAGTTCCGGCGGTGCGTCAGTTATCACTTTGCAGTTCCAGCTAACATTACCGCTCGATGTCGCCGAGCAGGAAGTGCAGGCCGCGATTAACGCTGCGACCAACTTGTTGCCGAGCGATCTGCCTAACCCGCCGGTTTACAGCAAAGTGAACCCGGCAGATCCGCCGATCATGACGCTCGCCGTCACCTCAACCGCCATGCCGATGACGCAAGTGGAAGATATGGTGGAAACCCGCGTCGCGCAGAAAATCTCGCAGATTTCCGGCGTCGGCCTGGTGACGCTTTCCGGCGGTCAGCGTCCGGCTGTTCGCGTCAAACTTAACGCTCAGGCGATTGCCGCCCTCGGCCTGACCAGCGAAACCGTGCGCACCGCCATTACCGGCGCTAACGTTAACTCGGCAAAAGGTAGCCTCGACGGCCCTTCCCGTGCGGTCACGCTTTCCGCGAACGACCAGATGCAATCCGCCGAAGAGTATCGCCAGCTAATCATCGCCTACCAGAACGGCGCGCCAATTCGTCTGGGCGATGTCGCAACTGTAGAGCAAGGTGCAGAAAACAGCTGGCTCGGCGCGTGGGCGAACAAAGAACAGGCCATTGTGATGAATGTTCAGCGCCAGCCCGGTGCTAACATTATCTCCACCGCCGACAGCATTCGGCAGATGCTGCCACAGCTCACTGAGAGTCTGCCGAAATCGGTGAAGGTGACAGTGCTTTCCGATCGCACCACCAATATCCGCGCATCCGTCGATGATACTCAGTTTGAATTGATGATGGCTATCGCGCTGGTAGTCATGATTATCTACCTGTTTTTGCGCAATATTCCGGCGACCATCATTCCCGGTGTTGCTGTACCGCTGTCGTTAATCGGCACTTTCGCGGTTATGGTGTTTCTCGATTTTTCAATCAATAACCTGACACTGATGGCGTTAACTATCGCCACCGGATTCGTGGTCGATGACGCCATCGTGGTGATCGAAAACATTTCCCGCTATATCGAAAAAGGCGAAAAACCGTTGGCGGCGGCGCTCAAGGGCGCAGGTGAAATCGGCTTTACCATTATCTCGCTGACCTTCTCACTGATTGCGGTGTTGATCCCACTGCTGTTTATGGGCGATATCGTCGGGCGACTGTTCCGCGAATTTGCTATTACCCTGGCGGTAGCGATTTTGATCTCAGCGGTGGTGTCGCTGACCCTGACACCGATGATGTGCGCGCGGATGCTCAGCCAGGAGTCGTTGCGTAAACAGAACCGCTTCTCCCGTGCCTCGGAAAAAATGTTCGACAGGATAATCGCCGCCTATGGTCGTGGACTGGCGAAAGTGCTGAATCATCCGTGGCTGACCTTAAGCGTGGCACTCAGCACGCTGCTGCTTAGCGTGCTGCTGTGGGTGTTCATTCCGAAAGGTTTCTTCCCGGTACAGGACAATGGCATTATTCAGGGCACTTTGCAGGCACCGCAATCCAGCTCCTTTGCCAATATGGCCCAGCGACAACGCCAGGTCGCGGACGTGATTTTGCAGGATCCGGCAGTGCAAAGCCTGACCTCATTTGTTGGCGTTGATGGCACTAACCCGTCGCTGAACAGTGCACGTTTACAAATCAACCTCAAACCGTTGGATGAACGTGATGATCGGGTGCAAAAAGTCATCGCCCGTCTGCAAACGGCGGTAGATAAAGTGCCGGGCGTCGATCTCTTCCTGCAACCAACGCAGGATCTGACTATTGATACTCAGGTCAGCCGCACCCAGTACCAGTTTACCTTGCAGGCCACGTCACTGGATGCGCTCAGTACCTGGGTGCCACAGTTGATGGAAAAACTCCAGCAACTGCCACAGCTTTCTGATGTCTCCAGCGACTGGCAGGACAAAGGGCTGGTGGCGTATGTCAATGTTGATCGCGACAGCGCCAGCCGTCTGGGGATCAGCATGGCGGATGTCGATAACGCCCTGTACAACGCGTTTGGTCAGCGGCTGATTTCCACTATTTATACTCAGGCCAACCAGTATCGCGTGGTGCTGGAGCACAACACCGAAAATACCCCAGGCCTCGCGGCGCTGGATACCATTCGCCTGACCAGCAGCGACGGCGGCGTGGTGCCGCTAAGCTCAATTGCCAAAATTGAGCAGCGTTTTGCGCCGCTCTCCATCAACCATCTGGATCAGTTCCCGGTAACGACCATCTCCTTTAACGTGCCGGATAACTATTCGCTGGGCGATGCGGTGCAGGCGATTATGGACACCGAAAAGACGCTGAATCTGCCGGTGGATATCACCACGCAGTTCCAGGGCAGCACCCTCGCCTTCCAGTCGGCGCTGGGCAGCACTGTCTGGCTGATTGTCGCGGCGGTGGTGGCGATGTATATCGTGCTCGGCATTCTGTACGAGAGCTTTATTCACCCGATCACCATTCTCTCGACGCTACCCACCGCAGGGGTTGGCGCACTGCTGGCGTTGCTGATTGCTGGTAGCGAACTGGATGTGATTGCGATTATCGGCATTATTTTGCTGATCGGTATCGTGAAGAAGAACGCCATCATGATGATCGACTTCGCGCTGGCTGCTGAGCGCGAGCAAGGCATGTCGCCGCGCGAGGCAATCTACCAGGCTTGTCTGTTGCGTTTTCGTCCGATCCTGATGACCACTCTGGCGGCTCTGCTTGGCGCGCTGCCGCTGATGTTGAGTACCGGGGTCGGCGCGGAACTGCGTCGTCCGTTAGGTATCGGCATGGTCGGCGGTCTGATTGTCAGCCAGGTGCTGACGCTGTTTACCACGCCGGTGATTTATTTGCTGTTCGACCGCCTGGCATTGTGGACCAAAAGCCGCTTTGCCCGTCATGAAGAGGAGGCGTAA", - "dna_sequence_length": 3123, - "functions": [ - "multidrug efflux system, subunit B" - ], - "id": "CDS_2062", - "location": [ - [ - "NC_000913", - 2155263, - "+", - 3123 - ] - ], - "md5": "be7ec4474b7e15776e703a52c13295e3", - "parent_gene": "", - "protein_md5": "7e11e082ac152db516c530026f399b58", - "protein_translation": "MQVLPPSSTGGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITLQFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPMTQVEDMVETRVAQKISQISGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPSRAVTLSANDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGAENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLTLTPMMCARMLSQESLRKQNRFSRASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWVFIPKGFFPVQDNGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTNPSLNSARLQINLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQPTQDLTIDTQVSRTQYQFTLQATSLDALSTWVPQLMEKLQQLPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTIRLTSSDGGVVPLSSIAKIEQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQAIMDTEKTLNLPVDITTQFQGSTLAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPTAGVGALLALLIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPREAIYQACLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYLLFDRLALWTKSRFARHEEEA", - "protein_translation_length": 1040, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130016" - ], - [ - "gene_synonym", - "ECK2072" - ], - [ - "gene_synonym", - "GeneID:946608" - ], - [ - "gene_synonym", - "b2076" - ], - [ - "gene_synonym", - "yegO" - ], - [ - "gene_synonym", - "mdtC" - ], - [ - "gene_synonym", - "JW2061" - ], - [ - "gene_synonym", - "EcoGene:EG14058" - ], - [ - "gene_synonym", - "NP_416580.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006877" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76399" - ] - ], - "dna_sequence": "GTGAAGTTTTTTGCCCTCTTCATTTACCGCCCGGTGGCGACGATTTTACTGTCGGTTGCCATTACCCTGTGCGGCATACTGGGCTTCCGTATGCTGCCGGTCGCCCCGCTGCCGCAGGTCGATTTTCCGGTGATTATCGTCAGCGCCTCGCTGCCCGGTGCGTCACCAGAAACAATGGCGTCTTCCGTTGCCACGCCGCTGGAGCGCTCACTTGGGCGCATTGCCGGAGTCAGTGAAATGACCTCCAGCAGTTCGCTCGGCAGCACGCGTATTATTTTGCAGTTTGATTTTGACCGGGATATCAACGGCGCAGCGCGTGATGTGCAGGCGGCGATCAACGCTGCACAAAGTTTGCTGCCCAGTGGGATGCCCAGCCGCCCGACCTATCGCAAAGCGAACCCGTCGGATGCGCCAATTATGATCCTCACGCTGACGTCCGATACTTATTCGCAGGGTGAACTGTACGATTTCGCCTCGACGCAGCTGGCTCCGACGATTTCGCAAATCGACGGTGTTGGTGATGTCGATGTCGGAGGCAGCTCACTGCCCGCCGTACGCGTCGGGCTGAATCCGCAGGCGCTGTTTAATCAGGGCGTGTCGCTGGACGACGTACGCACCGCCGTCAGCAATGCCAACGTGCGTAAACCGCAGGGCGCGCTGGAAGATGGCACTCACCGCTGGCAGATCCAGACCAATGATGAGCTAAAAACCGCCGCTGAATATCAGCCGTTGATTATTCACTACAACAACGGCGGCGCGGTTCGTCTGGGCGATGTGGCGACGGTGACCGACTCAGTGCAGGATGTGCGCAACGCCGGGATGACCAACGCCAAACCGGCTATTTTACTGATGATCCGCAAACTGCCGGAAGCCAATATTATCCAGACGGTTGACAGCATCCGGGCAAAATTACCGGAGTTGCAGGAAACCATTCCGGCGGCGATTGATCTGCAAATTGCCCAGGATCGCTCCCCCACCATTCGCGCCTCGCTGGAAGAAGTCGAGCAAACGCTGATTATCTCGGTGGCGCTGGTGATTCTGGTGGTGTTTTTATTCCTGCGCTCGGGTCGCGCCACTATTATTCCCGCCGTTTCGGTGCCGGTTTCGCTGATTGGTACGTTTGCGGCGATGTACCTGTGCGGATTCAGTCTCAATAACCTTTCGTTAATGGCGCTCACCATCGCTACTGGTTTCGTGGTGGATGACGCCATCGTGGTGCTGGAAAACATTGCACGTCATCTGGAAGCGGGAATGAAACCGTTGCAAGCCGCACTGCAAGGTACTCGCGAAGTCGGTTTTACGGTGCTGTCGATGAGTCTGTCACTGGTGGCGGTGTTCCTGCCGCTGCTGTTGATGGGCGGATTGCCGGGCCGACTGTTACGCGAATTTGCCGTGACGCTTTCTGTCGCCATTGGTATATCGTTGCTGGTTTCTCTGACATTAACGCCAATGATGTGTGGCTGGATGCTGAAAGCCAGCAAGCCGCGCGAGCAAAAGCGACTGCGTGGTTTTGGTCGCATGTTGGTAGCCCTGCAACAAGGCTACGGCAAGTCACTAAAATGGGTGCTCAATCATACCCGTCTGGTGGGCGTGGTGCTGCTTGGCACCATTGCGCTGAATATCTGGCTGTATATCTCGATCCCGAAAACCTTCTTCCCGGAGCAGGACACTGGCGTGTTGATGGGCGGGATTCAGGCGGATCAGAGTATTTCGTTTCAGGCGATGCGCGGTAAGTTGCAGGATTTCATGAAAATTATCCGTGACGATCCGGCAGTGGATAATGTCACCGGCTTTACAGGCGGTTCGCGAGTGAACAGCGGGATGATGTTTATCACCCTCAAGCCACGCGACGAACGCAGCGAAACGGCGCAGCAAATTATCGACCGTCTGCGCGTAAAACTGGCGAAAGAACCGGGGGCGAATCTGTTCCTGATGGCGGTACAGGATATTCGCGTTGGTGGGCGTCAGTCGAACGCCAGCTACCAGTACACGTTGTTATCCGACGACCTGGCGGCACTGCGAGAATGGGAGCCGAAAATCCGCAAAAAACTGGCGACGTTGCCGGAACTGGCGGACGTGAACTCCGATCAGCAGGATAACGGCGCGGAGATGAATCTGGTTTACGACCGCGACACCATGGCACGGCTGGGAATCGACGTACAAGCCGCCAACAGTCTGTTAAATAACGCCTTCGGTCAGCGGCAAATCTCGACCATTTACCAGCCGATGAACCAGTATAAAGTGGTGATGGAAGTGGATCCGCGCTATACCCAGGACATCAGTGCGCTGGAAAAAATGTTCGTTATCAATAACGAAGGCAAAGCGATCCCGCTGTCGTATTTCGCTAAATGGCAACCGGCGAATGCCCCACTATCGGTGAATCATCAGGGATTATCGGCGGCCTCGACCATTTCGTTTAACCTGCCGACCGGAAAATCGCTCTCGGACGCCAGTGCGGCGATCGATCGCGCAATGACCCAGCTTGGTGTGCCTTCGACGGTGCGCGGCAGTTTTGCCGGCACGGCGCAGGTGTTCCAGGAGACGATGAACTCGCAGGTGATCCTGATTATCGCCGCCATCGCCACGGTGTATATCGTGCTGGGTATCCTTTACGAGAGTTACGTACATCCGCTGACGATTCTCTCCACCCTGCCCTCGGCGGGCGTTGGAGCGCTGTTGGCGCTGGAGCTGTTCAATGCCCCGTTCAGCCTAATCGCCCTGATAGGGATCATGCTATTAATCGGCATCGTGAAGAAAAACGCCATTATGATGGTCGATTTTGCGCTTGAAGCCCAACGGCACGGTAACCTGACGCCGCAGGAAGCTATTTTCCAGGCCTGTCTGCTGCGTTTTCGCCCGATTATGATGACTACCCTGGCGGCGCTGTTTGGTGCGCTGCCGCTGGTATTGTCGGGCGGCGACGGCTCGGAGCTGCGGCAACCCCTGGGGATCACCATTGTCGGCGGACTGGTAATGAGCCAGCTCCTTACGCTGTATACCACGCCGGTGGTGTATCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAACCTAAACAAACGGTAACCGAGTAA", 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"MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIIVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLAPTISQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQGALEDGTHRWQIQTNDELKTAAEYQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATIIPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMLKASKPREQKRLRGFGRMLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPRDERSETAQQIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRKKLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGLSAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPKQTVTE", - "protein_translation_length": 1025, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "iceT" - ], - [ - "gene_synonym", - "yegB" - ], - [ - "gene_synonym", - "ECK2073" - ], - [ - "gene_synonym", - "GeneID:946601" - ], - [ - "gene_synonym", - "GI:16130017" - ], - [ - "gene_synonym", - "NP_416581.1" - ], - [ - "gene_synonym", - "b2077" - ], - [ - "gene_synonym", - "JW2062" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36554" - ], - [ - "gene_synonym", - "ASAP:ABE-0006879" - ], - [ - "gene_synonym", - "mdtD" - ], - [ - "gene_synonym", - "EcoGene:EG12136" - ] - ], - "dna_sequence": "ATGACAGATCTTCCCGACAGCACCCGTTGGCAATTGTGGATTGTGGCTTTCGGCTTCTTTATGCAGTCGCTGGACACCACCATCGTAAACACCGCCCTTCCCTCAATGGCGCAAAGCCTCGGGGAAAGTCCGTTGCATATGCACATGGTCATTGTCTCTTATGTGCTGACCGTGGCGGTGATGCTGCCCGCCAGCGGCTGGCTGGCGGACAAAGTCGGCGTGCGCAATATTTTCTTTACCGCCATCGTGCTGTTTACTCTCGGTTCACTGTTTTGCGCGCTTTCCGGCACGCTGAACGAACTGTTGCTGGCACGCGCGTTACAGGGCGTTGGCGGCGCGATGATGGTGCCGGTCGGCAGATTGACGGTGATGAAAATCGTACCGCGCGAGCAATATATGGCGGCGATGACCTTTGTCACGTTACCCGGTCAGGTCGGTCCGCTGCTCGGTCCGGCGCTCGGCGGTCTGCTGGTGGAGTACGCATCGTGGCACTGGATCTTTTTGATCAACATTCCGGTGGGGATTATCGGTGCGATCGCCACATTGCTGTTAATGCCGAACTACACCATGCAGACGCGGCGCTTTGATCTCTCCGGATTTTTATTGCTGGCGGTTGGCATGGCGGTATTAACCCTGGCGCTGGACGGCAGTAAAGGTACAGGTTTATCGCCGCTGACGATTGCAGGCCTGGTCGCAGTTGGCGTGGTGGCACTGGTGCTTTATCTGCTGCACGCCAGAAATAACAACCGTGCCCTGTTCAGTCTGAAACTGTTCCGTACTCGTACCTTTTCGCTGGGCCTGGCGGGGAGCTTTGCCGGACGTATTGGCAGTGGCATGTTGCCCTTTATGACACCGGTTTTCCTGCAAATTGGCCTCGGTTTCTCGCCGTTTCATGCCGGACTGATGATGATCCCGATGGTGCTTGGCAGCATGGGAATGAAGCGAATTGTGGTACAGGTGGTGAATCGCTTTGGTTATCGTCGGGTACTGGTAGCGACCACGCTGGGTCTGTCGCTGGTCACCCTGTTGTTTATGACTACCGCCCTGCTGGGCTGGTACTACGTTTTGCCGTTCGTCCTGTTTTTACAAGGGATGGTCAACTCGACGCGTTTCTCCTCCATGAACACCCTGACGCTGAAAGATCTCCCGGACAATCTGGCGAGCAGCGGCAACAGCCTGCTGTCGATGATTATGCAATTGTCGATGAGTATCGGCGTCACTATCGCCGGGCTGTTGCTGGGACTTTTTGGTTCACAGCATGTCAGCGTCGACAGCGGCACCACACAAACCGTCTTTATGTACACCTGGCTTAGCATGGCGTTGATCATCGCCCTTCCGGCGTTCATCTTTGCCAGAGTGCCGAACGATACGCATCAAAATGTAGCTATTTCGCGGCGAAAAAGGAGCGCGCAATGA", 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"gene_synonym", - "NP_416582.1" - ], - [ - "gene_synonym", - "baeS" - ], - [ - "gene_synonym", - "GeneID:946611" - ], - [ - "gene_synonym", - "ASAP:ABE-0006882" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30847" - ], - [ - "gene_synonym", - "GI:16130018" - ], - [ - "gene_synonym", - "JW2063" - ], - [ - "gene_synonym", - "EcoGene:EG11617" - ] - ], - "dna_sequence": "ATGAAGTTCTGGCGACCCGGTATTACCGGCAAACTGTTTCTGGCGATTTTCGCCACCTGCATTGTCTTGCTGATCAGTATGCACTGGGCGGTGCGTATCAGTTTTGAGCGTGGCTTTATTGATTACATCAAGCATGGTAATGAACAGCGATTACAACTGTTAAGTGATGCGCTTGGCGAGCAGTATGCGCAGCATGGCAACTGGCGCTTCCTGCGCAACAATGATCGCTTTGTCTTTCAGATCCTGCGTTCATTTGAACACGATAATTCGGAAGATAAACCCGGCCCGGGTATGCCACCGCACGGCTGGCGTACCCAGTTCTGGGTGGTTGATCAAAACAACAAAGTGCTGGTTGGTCCGCGAGCGCCGATTCCACCTGACGGTACACGGCGACCCATTCTGGTCAACGGTGCGGAAGTTGGCGCGGTGATCGCCTCCCCCGTTGAGCGGTTAACGCGCAATACTGATATCAATTTCGATAAACAACAGCGGCAAACCAGCTGGTTGATTGTCGCCCTGGCAACGTTACTCGCGGCACTTGCCACTTTTCTGCTGGCGCGCGGTTTACTGGCACCGGTAAAACGACTTGTCGATGGCACGCACAAACTGGCGGCGGGCGATTTCACTACCCGCGTAACGCCCACCAGTGAAGATGAACTGGGCAAACTGGCGCAAGACTTCAACCAGCTTGCCAGCACACTGGAGAAAAACCAGCAAATGCGGCGCGATTTTATGGCCGATATTTCTCACGAACTGCGTACGCCATTAGCGGTGCTGCGCGGTGAACTGGAAGCCATTCAGGATGGCGTGCGTAAATTCACGCCGGAGACGGTGGCGTCTTTACAGGCGGAGGTCGGTACACTGACCAAACTGGTTGACGATCTCCATCAGTTGTCGATGTCTGATGAAGGCGCTCTCGCCTATCAAAAAGCACCGGTAGATTTGATCCCACTGCTGGAAGTGGCGGGCGGCGCATTTCGCGAACGATTCGCCAGTCGTGGCCTGAAACTGCAATTTTCCCTGCCAGACAGTATTACCGTATTTGGCGATCGCGACCGTTTAATGCAGTTATTCAATAACTTACTGGAAAACAGCCTGCGCTACACTGACAGCGGCGGCAGCCTGCAAATCTCTGCCGGGCAGCGCGACAAAACGGTGCGCCTGACCTTTGCCGACAGTGCGCCAGGTGTCAGTGACGATCAGCTACAAAAATTGTTTGAACGTTTTTATCGCACCGAAGGTTCCCGCAACCGTGCCAGCGGCGGTTCCGGGCTGGGGCTGGCGATTTGCCTGAACATTGTTGAAGCACATAATGGTCGCATTATTGCTGCCCATTCGCCTTTTGGCGGGGTAAGCATTACAGTAGAGTTACCGCTGGAACGGGATTTACAGAGAGAAGTATGA", 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"gene_synonym", - "b2079" - ], - [ - "gene_synonym", - "baeR" - ], - [ - "gene_synonym", - "ASAP:ABE-0006884" - ], - [ - "gene_synonym", - "GI:16130019" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69228" - ], - [ - "gene_synonym", - "JW2064" - ], - [ - "gene_synonym", - "NP_416583.1" - ], - [ - "gene_synonym", - "EcoGene:EG11618" - ] - ], - "dna_sequence": "ATGACCGAGTTACCAATCGACGAAAACACACCGCGTATTTTGATCGTGGAAGATGAACCGAAGCTGGGGCAGTTGCTCATTGATTATCTGCGTGCTGCGAGCTATGCGCCGACGCTTATCAGCCACGGCGATCAGGTACTGCCGTATGTGCGCCAGACACCACCGGATCTGATCCTGTTAGATCTGATGCTCCCTGGCACCGATGGCCTGACGCTGTGCCGGGAAATTCGTCGTTTTTCTGACATTCCGATCGTGATGGTGACGGCAAAAATCGAAGAGATCGATCGCCTGCTGGGGCTGGAGATTGGCGCAGATGATTATATCTGTAAGCCGTACAGCCCACGGGAAGTGGTAGCGCGCGTCAAAACCATTTTGCGCCGTTGCAAACCGCAGCGCGAGTTGCAGCAACAGGATGCTGAAAGCCCGTTGATTATCGACGAAGGTCGTTTTCAGGCTTCATGGCGCGGTAAAATGCTTGACCTGACGCCTGCGGAATTTCGTCTGCTGAAAACGCTCTCTCACGAACCAGGAAAAGTGTTCTCCCGCGAGCAATTGCTCAATCATCTTTATGACGACTACCGCGTAGTAACCGACCGCACCATCGACAGCCACATTAAAAACCTGCGCCGCAAGCTGGAATCTCTCGACGCCGAACAGTCATTTATCCGCGCCGTTTATGGCGTCGGTTACCGCTGGGAAGCCGACGCCTGCCGCATCGTTTAG", - "dna_sequence_length": 723, - "functions": [ - "response regulator in two-component regulatory system with BaeS" - ], - "id": "CDS_2066", - "location": [ - [ - "NC_000913", - 2164276, - "+", - 723 - ] - ], - "md5": "dd8684ffb395cb893145fe2a97a4f8de", - "parent_gene": "", - "protein_md5": "2a7a296687bb30a43a16c69021e7bb87", - "protein_translation": "MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYVRQTPPDLILLDLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLDLTPAEFRLLKTLSHEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAEQSFIRAVYGVGYRWEADACRIV", - "protein_translation_length": 240, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2080" - ], - [ - "gene_synonym", - "ASAP:ABE-0006888" - ], - [ - "gene_synonym", - "ECK2076" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76402" - ], - [ - "gene_synonym", - "GeneID:947095" - ], - [ - "gene_synonym", - "EcoGene:EG14059" - ], - [ - "gene_synonym", - "yegP" - ], - [ - "gene_synonym", - "NP_416584.4" - ], - [ - "gene_synonym", - "JW5339" - ], - [ - "gene_synonym", - "GI:90111382" - ] - ], - "dna_sequence": "ATGGCTGGTTGGTTTGAACTCAGTAAGAGCAGTGATAATCAGTTCCGGTTTGTGCTAAAAGCGGGCAATGGTGAGACTATCCTCACCAGCGAGCTTTATACCTCAAAAACCTCTGCGGAAAAGGGCATCGCGTCGGTGCGTAGCAACAGCCCGCAAGAAGAACGCTATGAGAAAAAAACGGCAAGTAACGGCAAATTCTATTTCAATCTGAAAGCCGCTAATCATCAAATTATCGGCTCCAGCCAGATGTACGCCACCGCGCAATCTCGTGAAACCGGAATTGCCTCCGTTAAAGCCAATGGCACAAGCCAGACGGTGAAAGACAATACGTAA", - "dna_sequence_length": 333, - "functions": [ - "UPF0339 family protein" - ], - "id": "CDS_2067", - "location": [ - [ - "NC_000913", - 2165189, - "+", - 333 - ] - ], - "md5": "c517a9187a741c33923f69d8aab803d5", - "parent_gene": "", - "protein_md5": "41ac41e59f5c958149e04af87818445c", - "protein_translation": "MAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNLKAANHQIIGSSQMYATAQSRETGIASVKANGTSQTVKDNT", - "protein_translation_length": 110, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2081" - ], - [ - "gene_synonym", - "ECK2077" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76403" - ], - [ - "gene_synonym", - "EcoGene:EG14060" - ], - [ - "gene_synonym", - "GeneID:946609" - ], - [ - "gene_synonym", - "ASAP:ABE-0006891" - ], - [ - "gene_synonym", - "yegQ" - ], - [ - "gene_synonym", - "JW2066" - ], - [ - "gene_synonym", - "NP_416585.1" - ], - [ - "gene_synonym", - "GI:16130021" - ] - ], - "dna_sequence": "ATGTTTAAACCGGAACTCCTTTCCCCGGCGGGAACGCTGAAAAATATGCGTTACGCTTTCGCTTATGGCGCAGATGCTGTTTATGCGGGCCAGCCGCGTTATTCCCTGCGTGTGCGCAACAACGAATTCAACCACGAAAATCTTCAGCTCGGCATCAATGAAGCCCACGCGCTGGGGAAAAAGTTTTATGTCGTGGTCAACATTGCACCGCACAACGCCAAGCTGAAAACCTTTATCCGTGACCTGAAACCGGTGGTGGAAATGGGGCCGGATGCGCTGATTATGTCCGATCCAGGGCTGATTATGCTGGTGCGTGAGCACTTCCCTGAAATGCCGATCCACCTTTCGGTGCAGGCTAACGCCGTGAACTGGGCGACGGTGAAATTCTGGCAGCAAATGGGCCTGACCCGCGTGATCCTCTCTCGCGAGCTGTCGCTGGAAGAGATTGAAGAGATCCGCAATCAGGTGCCGGATATGGAGATCGAGATCTTCGTTCACGGCGCGCTGTGCATGGCCTACTCCGGTCGCTGCCTGCTCTCTGGCTATATCAACAAGCGCGACCCGAACCAGGGCACCTGCACCAACGCCTGCCGCTGGGAGTACAACGTCCAGGAAGGGAAAGAAGATGATGTTGGCAACATCGTACACAAGTACGAGCCGATTCCGGTGCAAAATGTTGAGCCGACGCTGGGTATCGGCGCACCAACCGACAAAGTGTTTATGATCGAAGAGGCCCAGCGTCCGGGCGAGTATATGACCGCGTTTGAAGATGAGCACGGCACTTACATCATGAACTCGAAAGATCTGCGCGCCATCGCCCATGTAGAACGCCTGACCAAAATGGGCGTGCATTCGCTGAAAATCGAAGGTCGTACCAAATCTTTCTACTATTGTGCACGCACCGCACAGGTTTACCGCAAAGCTATCGATGACGCCGCTGCGGGAAAACCGTTCGATACCAGCCTGCTGGAAACTCTGGAAGGTCTGGCGCATCGTGGCTATACCGAAGGTTTCCTGCGTCGTCATACTCACGACGATTATCAGAACTACGAATACGGTTATTCAGTTTCTGACCGCCAGCAGTTTGTTGGTGAGTTTACCGGTGAGCGCAAGGGGGACCTCGCGGCGGTAGCGGTGAAAAATAAATTCTCCGTTGGCGACAGCCTTGAGCTGATGACGCCGCAAGGCAACATTAATTTTACCCTTGAGCACATGGAAAACGCCAAAGGCGAAGCTATGCCGATAGCACCAGGCGATGGTTATACTGTGTGGCTCCCGGTCCCGCAGGATCTTGAGCTCAATTACGCGCTGCTGATGCGTAATTTCTCCGGGGAAACCACGCGTAATCCCCACGGTAAGTGA", 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- ], - [ - "gene_synonym", - "ECK2079" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37057" - ], - [ - "gene_synonym", - "ASAP:ABE-0006893" - ], - [ - "gene_synonym", - "JW2067" - ], - [ - "gene_synonym", - "GeneID:945404" - ], - [ - "gene_synonym", - "GI:16130022" - ] - ], - "dna_sequence": "ATGTTTCATTGTCCTTTATGCCAGCATGCCGCACATGCGCGTACAAGCCGCTATATCACTGACACGACAAAAGAGCGTTATCACCAGTGTCAGAACGTGAATTGCAGCGCCACGTTCATCACTTATGAGTCGGTACAGCGATACATTGTGAAGCCGGGAGAAGTCCACGTCGTAAGGCCGCACCCGTTGCCGTCAGGGCAGCAAATTATGTGGATGTAA", - "dna_sequence_length": 219, - "functions": [ - "orphan Ogr protein, positive regulator of P2 growth" - ], - "id": "CDS_2069", - "location": [ - [ - "NC_000913", - 2167520, - "-", - 219 - ] - ], - "md5": "ce09338bdb37c7b4e6089a3441b745c0", - "parent_gene": "", - "protein_md5": "0b0c31dc09b148e28d9f1b02f5935420", - "protein_translation": "MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYESVQRYIVKPGEVHVVRPHPLPSGQQIMWM", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2083" - ], - [ - "gene_synonym", - "GeneID:949050" - ], - [ - "gene_synonym", - "ECK2080" - ], - [ - "gene_synonym", - "EcoGene:EG14309" - ], - [ - "gene_synonym", - "ASAP:ABE-0006896" - ], - [ - "gene_synonym", - "yegZ" - ], - [ - "gene_synonym", - "JW5886" - ] - ], - "dna_sequence": "GTAGCAGAGTTCTCCATCAGCCTGGCTACCGGTCGGGCAGATATTTACACGGAAACACCGGTCAAAGTGTCTGGCTTTAAGCGCGTCATAGACGAGCAGGACTGGACAATCACTAAGGTGACACATTTTCTGAATAATAGCGGCTTCACGACGTCATTAGAGCTTGAGGTCAGGCTTTCTGATGTGGGGTACGAAACAGAAGATAATGAGTGA", - "dna_sequence_length": 213, - "id": "CDS_2070", - "location": [ - [ - "NC_000913", - 2167814, - "-", - 213 - ] - ], - "md5": "3e954bfb30c6bb3aecc6b6c484f3d8d5", - "parent_gene": "", - "protein_md5": "3480ee396a72e2051929f6213358bd41", - "protein_translation": "VAEFSISLATGRADIYTETPVKVSGFKRVIDEQDWTITKVTHFLNNSGFTTSLELEVRLSDVGYETEDNE", - "protein_translation_length": 70, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416589.2" - ], - [ - "gene_synonym", - "b2085" - ], - [ - "gene_synonym", - "GeneID:946613" - ], - [ - "gene_synonym", - "ECK2081" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76406" - ], - [ - "gene_synonym", - "yegR" - ], - [ - "gene_synonym", - "EcoGene:EG14061" - ], - [ - "gene_synonym", - "ASAP:ABE-0006907" - ], - [ - "gene_synonym", - "JW5837" - ], - [ - "gene_synonym", - "GI:90111383" - ] - ], - "dna_sequence": "ATGAAAAAGATAGCTGCTATATCATTAATTAGTATTTTTATTATGTCTGGTTGTGCTGTGCATAATGATGAGACAAGTATCGGTAAATTTGGTCTTGCATATAAAAGTAATATTCAGCGTAAACTCGATAACCAATACTACACCGAAGCCGAAGCTTCTTTAGCCAGGGGTAGAATATCTGGTGCAGAAAATATAGTAAAAAATGATGCAACTCATTTCTGTGTTACTCAGGGCAAAAAAATGCAAATAGTTGAGCTGAAGACAGAAGGTGTAGGATTACATGGTGTCGCTCGTCTGACATTCAAATGTGGAGAGTGA", - "dna_sequence_length": 318, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2071", - "location": [ - [ - "NC_000913", - 2168306, - "-", - 318 - ] - ], - "md5": "bceb8b799b86da316517e8e27ba76288", - "parent_gene": "", - "protein_md5": "42b40cb8c2d2d21bdbec569743b47592", - "protein_translation": "MKKIAAISLISIFIMSGCAVHNDETSIGKFGLAYKSNIQRKLDNQYYTEAEASLARGRISGAENIVKNDATHFCVTQGKKMQIVELKTEGVGLHGVARLTFKCGE", - "protein_translation_length": 105, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946626" - ], - [ - "gene_synonym", - "b2086" - ], - [ - "gene_synonym", - "ECK2082" - ], - [ - "gene_synonym", - "EcoGene:EG14367" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76407" - ], - [ - "gene_synonym", - "yegS" - ], - [ - "gene_synonym", - "GI:16130026" - ], - [ - "gene_synonym", - "JW2070" - ], - [ - "gene_synonym", - "NP_416590.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006911" - ] - ], - "dna_sequence": "ATGGCAGAATTTCCCGCCAGCTTACTGATTCTTAATGGCAAAAGTACTGACAATCTACCCTTGCGCGAAGCAATTATGCTGTTGCGTGAGGAAGGAATGACGATCCATGTGCGGGTCACCTGGGAGAAAGGCGATGCCGCACGATATGTAGAGGAGGCCCGGAAGTTTGGCGTCGCAACGGTGATTGCCGGTGGTGGCGATGGCACCATTAATGAAGTTTCTACGGCGTTGATTCAGTGTGAGGGGGATGACATACCCGCGCTGGGAATTTTGCCATTAGGAACCGCCAATGATTTTGCCACCAGTGTAGGGATTCCTGAGGCACTGGATAAGGCGCTGAAACTGGCAATTGCCGGTGACGCCATTGCGATAGATATGGCGCAGGTCAACAAACAAACCTGTTTTATTAATATGGCGACAGGCGGATTTGGGACGCGTATTACCACAGAAACGCCGGAAAAATTAAAAGCCGCGCTGGGTAGCGTCTCTTACATCATTCATGGCTTAATGCGTATGGATACTCTGCAACCGGACCGTTGTGAAATCCGCGGTGAAAACTTTCACTGGCAAGGTGACGCCCTGGTCATTGGTATTGGTAACGGGCGTCAGGCCGGTGGCGGTCAGCAATTGTGTCCGAACGCGTTAATTAACGATGGCTTGCTGCAACTGCGCATTTTTACCGGCGATGAAATACTTCCGGCTCTCGTATCAACCTTAAAATCTGACGAAGATAACCCGAATATTATCGAAGGCGCTTCGTCGTGGTTTGATATTCAGGCACCACACGACATCACCTTTAATCTTGATGGCGAACCGTTGAGTGGGCAAAATTTTCATATTGAAATACTTCCGGCAGCGTTGCGTTGTCGATTACCACCAGATTGTCCACTGTTGCGTTAA", - "dna_sequence_length": 900, - "functions": [ - "phosphatidylglycerol kinase, metal-dependent" 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"UniProtKB/Swiss-Prot:P36930" - ], - [ - "gene_synonym", - "GeneID:2847672" - ], - [ - "gene_synonym", - "ASAP:ABE-0006914" - ] - ], - "dna_sequence": "ATGAATTCATTCGAGCGAAGGAATAAGATCATCCAATTAGTGAATGAACAGGGAACCGTGCTTGTTCAGGATCTGGCGGGAGTATTTGCTGCCTCGGAAGCGACAATCCGTGCCGATTTGCGCTTTCTCGAACAAAAAGGCGTGGTTACGCGCTTTCATGGCGGTGCGGCGAAAATAATGTCTGGTAATAGTGAAACCGAGACCCAGGAAGTCGGGTTTAAAGAGCGATTTCAGCTCGCCAGCGCGCCAAAAAACAGAATAGCGCAGGCGGCAGTCAAAATGATCCACGAAGGGATGACCGTTATTCTCGACAGCGGAAGTACGACAATGCTTATCGCCGAAGGATTAATGACCGCCAAAAATATCACGGTGATTACCAACAGTCTCCCGGCAGCGTTTGCCCTTTCCGAAAATAAAGACATTACTCTGGTCGTCTGTGGTGGCACGGTCCGCCATAAAACGCGCTCGATGCATGGTTCCATTGCCGAGCGTTCATTACAGGATATTAATGCCGATTTAATGTTTGTCGGTGCTGATGGTATTGATGCGGTTAATGGTATTACGACCTTTAATGAAGGTTATTCTATTAGCGGTGCGATGGTCACAGCCGCTAATAAAGTGATTGCCGTTCTCGATTCATCGAAATTTAACCGTCGCGGTTTTAATCAGGTACTACCAATCGAAAAAATTGACATTATTATTACCGATGATGCTGTGTCAGAGGTGGATAAACTGGCATTGCAGAAGACGCGGGTAAAATTAATTACGGTGTAG", - "dna_sequence_length": 774, - "id": "CDS_2073", - "location": [ - [ - "NC_000913", - 2171727, - "-", - 299 - ], - [ - "NC_000913", - 2170167, - "-", - 475 - ] - ], - "md5": "c46cf7f62399e5ed6587805b5174e27d", - "parent_gene": "", - "protein_md5": "9a4a98271e393a4fd93064d8a62aca18", - "protein_translation": "MNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRFLEQKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMTVILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMHGSIAERSLQDINADLMFVGADGIDAVNGITTFNEGYSISGAMVTAANKVIAVLDSSKFNRRGFNQVLPIEKIDIIITDDAVSEVDKLALQKTRVKLITV", - "protein_translation_length": 257, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF70" - ], - [ - "gene_synonym", - "EcoGene:EG40005" - ], - [ - "gene_synonym", - "b2088" - ], - [ - "gene_synonym", - "insE1" - ], - [ - "gene_synonym", - "GeneID:946616" - ], - [ - "gene_synonym", - "NP_416592.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0006917" - ], - [ - "gene_synonym", - "ECK0298" - ], - [ - "gene_synonym", - "GI:226524731" - ] - ], - "dna_sequence": "ATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA", - "dna_sequence_length": 300, - "functions": [ - "IS3 transposase A" - ], - "id": "CDS_2074", - "location": [ - [ - "NC_000913", - 2170236, - "+", - 300 - ] - ], - "md5": "2b8299a430402ee6e8586f7af8039b36", - "parent_gene": "", - "protein_md5": "03ddb941ec5f7556890ce78365da94d2", - "protein_translation": "MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK", - "protein_translation_length": 99, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946629" - ], - [ - "gene_synonym", - "b2089" - ], - [ - "gene_synonym", - "EcoGene:EG40006" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF83" - ], - [ - "gene_synonym", - "insF1" - ], - [ - "gene_synonym", - "ASAP:ABE-0006919" - ], - [ - "gene_synonym", - "GI:16130028" - ], - [ - "gene_synonym", - "NP_416593.1" - ], - [ - "gene_synonym", - "ECK0299" - ] - ], - "dna_sequence": "ATGAAGTATGTCTTTATTGAAAAACATCAGGCTGAGTTCAGCATCAAAGCAATGTGCCGCGTGCTCCGGGTGGCCCGCAGCGGCTGGTATACGTGGTGTCAGCGGCGGACAAGGATAAGCACGCGTCAGCAGTTCCGCCAACACTGCGACAGCGTTGTCCTCGCGGCTTTTACCCGGTCAAAACAGCGTTACGGTGCCCCACGCCTGACGGATGAACTGCGTGCTCAGGGTTACCCCTTTAACGTAAAAACCGTGGCGGCAAGCCTGCGCCGTCAGGGACTGAGGGCAAAGGCCTCCCGGAAGTTCAGCCCGGTCAGCTACCGCGCACACGGCCTGCCTGTGTCAGAAAATCTGTTGGAGCAGGATTTTTACGCCAGTGGCCCGAACCAGAAGTGGGCAGGAGACATCACGTACTTACGTACAGATGAAGGCTGGCTGTATCTGGCAGTGGTCATTGACCTGTGGTCACGTGCCGTTATTGGCTGGTCAATGTCGCCACGCATGACGGCGCAACTGGCCTGCGATGCCCTGCAGATGGCGCTGTGGCGGCGTAAGAGGCCCCGGAACGTTATCGTTCACACGGACCGTGGAGGCCAGTACTGTTCAGCAGATTATCAGGCGCAACTGAAGCGGCATAATCTGCGTGGAAGTATGAGCGCAAAAGGTTGCTGCTACGATAATGCCTGCGTGGAAAGCTTCTTTCATTCGCTGAAAGTGGAATGTATCCATGGAGAACACTTTATCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAATGTGATTACAATCGGTGGCGGCGGCACAGTTGGTGTGGCGGCCTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAG", - "dna_sequence_length": 867, - "functions": [ - "IS3 transposase B" - ], - "id": "CDS_2075", - "location": [ - [ - "NC_000913", - 2170532, - "+", - 867 - ] - ], - "md5": "f16497ced719778b623ae488d3ff6549", - "parent_gene": "", - "protein_md5": "d747daab607a7e429605aaffca2556f8", - "protein_translation": "MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA", - "protein_translation_length": 288, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006924" - ], - [ - "gene_synonym", - "b2091" - ], - [ - "gene_synonym", - "NP_416594.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9S3" - ], - [ - "gene_synonym", - "GeneID:946598" - ], - [ - "gene_synonym", - "ECK2084" - ], - [ - "gene_synonym", - "JW2075" - ], - [ - "gene_synonym", - "EcoGene:EG12417" - ], - [ - "gene_synonym", - "GI:16130029" - ], - [ - "gene_synonym", - "gatD" - ] - ], - 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"ATGAAATCAGTGGTGAATGATACTGATGGTATCGTGCGCGTTGCAGAAAGCGTCATTCCTGAAATTAAACATCAGGATGAGGTGCGGGTAAAAATTGCCAGCTCGGGCTTATGTGGTTCCGATTTACCCAGGATATTTAAAAATGGTGCACATTATTATCCAATAACGTTAGGCCATGAATTTAGCGGCTATATTGATGCGGTGGGATCCGGTGTTGATGATTTACACCCTGGCGATGCGGTTGCCTGTGTGCCGTTATTACCCTGTTTTACTTGTCCAGAGTGTCTGAAAGGGTTTTATTCCCAGTGCGCAAAATATGATTTTATTGGCTCGCGGCGTGATGGTGGATTTGCTGAATATATTGTCGTTAAGCGAAAAAATGTCTTTGCTCTACCCACGGATATGCCTATTGAGGATGGGGCTTTTATTGAGCCGATTACCGTTGGTCTGCATGCTTTTCATTTAGCGCAAGGTTGTGAGAATAAAAACGTTATTATTATTGGTGCCGGAACCATTGGCCTGCTGGCCATTCAGTGCGCTGTCGCGCTGGGAGCAAAGAGTGTGACGGCGATCGACATTAGTTCAGAAAAACTGGCACTGGCAAAATCTTTCGGTGCGATGCAAACATTTAACAGTAGCGAAATGAGCGCGCCGCAAATGCAGAGCGTTTTACGCGAACTGCGCTTTAATCAGCTTATCCTCGAGACGGCTGGCGTACCGCAAACTGTCGAACTGGCGGTAGAGATTGCCGGTCCTCATGCCCAACTGGCGCTGGTGGGCACGTTGCATCAGGATCTGCATTTAACATCGGCAACGTTTGGCAAAATATTGCGTAAAGAGCTGACGGTTATCGGCAGTTGGATGAACTACTCCAGCCCTTGGCCGGGGCAGGAGTGGGAAACGGCGAGCCGGTTGCTGACAGAACGTAAGTTAAGCCTGGAGCCATTAATCGCTCACCGTGGAAGCTTTGAAAGCTTCGCCCAGGCGGTGCGTGACATCGCTCGTAATGCTATGCCGGGCAAAGTGTTGCTCATTCCCTGA", 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"ECK2085" - ], - [ - "gene_synonym", - "JW2076" - ], - [ - "gene_synonym", - "EcoGene:EG12416" - ], - [ - "gene_synonym", - "gatC" - ] - ], - "dna_sequence": "ATGTTTTCAGAAGTCATGCGTTATATTCTCGACCTCGGCCCTACGGTGATGCTGCCGATTGTCATCATTATTTTTTCTAAAATATTAGGCATGAAGGCAGGCGATTGCTTTAAAGCGGGTCTGCATATCGGGATTGGCTTTGTTGGCATTGGCCTTGTGATTGGCTTAATGCTGGATTCCATTGGCCCGGCGGCGAAAGCGATGGCGGAAAATTTCGACCTGAATCTGCATGTGGTCGATGTTGGCTGGCCGGGCTCTTCACCAATGACCTGGGCGTCGCAAATTGCGCTGGTGGCGATTCCGATTGCGATTCTGGTTAACGTGGCGATGTTACTGACCCGTATGACGCGGGTGGTAAATGTTGATATCTGGAATATCTGGCATATGACCTTCACCGGCGCGTTGCTGCATCTGGCAACCGGTTCATGGATGATAGGGATGGCAGGTGTGGTAATTCACGCGGCGTTTGTTTATAAGCTCGGCGACTGGTTTGCCCGCGATACCCGAAATTTCTTTGAGCTGGAAGGTATTGCTATTCCGCACGGTACGTCGGCGTATATGGGGCCGATTGCGGTGCTGGTCGATGCTATCATCGAGAAAATCCCAGGCGTTAACCGAATTAAATTTAGCGCCGACGATATTCAGCGCAAATTTGGTCCATTTGGCGAGCCTGTCACCGTGGGTTTTGTGATGGGGCTGATTATCGGCATCCTCGCGGGTTACGATGTCAAAGGTGTATTGCAGCTGGCGGTAAAAACGGCGGCAGTGATGCTGCTAATGCCACGGGTGATTAAACCCATCATGGATGGTTTAACGCCCATCGCTAAGCAGGCTCGTAGTCGTTTACAGGCGAAGTTCGGCGGTCAGGAGTTCCTGATTGGCCTTGATCCGGCGTTGCTGCTGGGACATACGGCGGTGGTATCGGCAAGCCTGATTTTTATCCCACTCACCATTTTAATTGCTGTTTGTGTGCCGGGTAATCAGGTGCTGCCGTTTGGCGATCTTGCCACCATCGGCTTCTTCGTGGCGATGGCGGTCGCCGTGCATCGTGGAAATCTGTTCCGCACCTTAATCTCGGGTGTCATCATTATGAGCATCACCCTGTGGATCGCGACGCAAACTATTGGTTTGCACACCCAACTGGCGGCTAATGCTGGGGCGTTAAAAGCCGGGGGTATGGTGGCTTCAATGGATCAGGGCGGTTCTCCCATTACCTGGTTACTGATTCAGGTTTTCTCCCCGCAAAATATTCCCGGTTTCATTATTATCGGTGCAATTTATCTGACCGGTATTTTCATGACCTGGCGTAGAGCGCGTGGCTTTATTAAACAAGAGAAAGTCGTTCTCGCAGAATAA", 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"UniProtKB/Swiss-Prot:P37188" - ], - [ - "gene_synonym", - "GeneID:946610" - ], - [ - "gene_synonym", - "ECK2086" - ], - [ - "gene_synonym", - "JW2077" - ], - [ - "gene_synonym", - "NP_416596.1" - ], - [ - "gene_synonym", - "GI:16130031" - ], - [ - "gene_synonym", - "gatB" - ] - ], - "dna_sequence": "ATGAAACGCAAGATTATTGTCGCTTGCGGAGGCGCGGTTGCGACCTCTACGATGGCGGCGGAAGAAATTAAAGAGTTGTGTCAGAATCATAATATTCCTGTTGAATTAATCCAGTGTCGGGTTAATGAAATAGAAACCTATATGGATGGTGTGCATTTGATATGCACCACTGCCAAAGTGGATCGTAGTTTTGGCGATATTCCGTTAGTTCACGGCATGCCTTTTATTTCTGGTATCGGTATCGAAGCATTACAAAATAAAATTCTGACTATCTTACAGGGGTGA", - "dna_sequence_length": 285, - "functions": [ - "galactitol-specific enzyme IIB component of PTS" - ], - "id": "CDS_2078", - "location": [ - [ - "NC_000913", - 2174566, - "-", - 285 - ] - ], - "md5": "4202a2a6e0199bf0dbf2f672794664c0", - "parent_gene": "", - "protein_md5": "da69806bef54169d11eeb8bb4dcc9aa2", - "protein_translation": "MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEIETYMDGVHLICTTAKVDRSFGDIPLVHGMPFISGIGIEALQNKILTILQG", - "protein_translation_length": 94, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006932" - ], - [ - "gene_synonym", - "b2094" - ], - [ - "gene_synonym", - "JW2078" - ], - [ - "gene_synonym", - "ECK2087" - ], - [ - "gene_synonym", - "GeneID:946633" - ], - [ - "gene_synonym", - "EcoGene:EG12414" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69828" - ], - [ - "gene_synonym", - "NP_416597.1" - ], - [ - "gene_synonym", - "GI:16130032" - ], - [ - "gene_synonym", - "JW2081" - ], - [ - "gene_synonym", - "gatA" - ] - ], - "dna_sequence": "ATGACTAACCTGTTTGTTCGTAGCGGAATTTCTTTTGTCGATCGTAGCGAAGTTTTAACCCATATCGGTAATGAGATGCTCGCCAAAGGTGTGGTTCATGATACCTGGCCACAGGCATTAATTGCCAGAGAAGCAGAATTCCCTACCGGGATAATGCTTGAGCAGCACGCTATTGCAATACCGCATTGTGAGGCGATTCATGCTAAGTCGTCAGCCATTTATCTGTTAAGGCCAACAAATAAAGTTCATTTTCAGCAAGCGGATGATGATAACGACGTGGCGGTATCGTTGGTTATTGCGTTGATTGTGGAAAATCCGCAGCAGCAATTGAAACTTTTACGCTGTTTATTTGGCAAGTTACAACAGCCCGATATCGTCGAGACACTAATCACTCTTCCTGAAACCCAGTTAAAGGAATACTTCACAAAGTATGTTTTAGATTCAGACGAATAA", - "dna_sequence_length": 453, - "functions": [ - "galactitol-specific enzyme IIA component of PTS" - ], - "id": "CDS_2079", - "location": [ - [ - "NC_000913", - 2175049, - "-", - 453 - ] - ], - "md5": "7cadf9a0d0a78e24d8c560b12ed2abb2", - "parent_gene": "", - "protein_md5": "124c6ffa0fb608b2f175247458f097f9", - "protein_translation": "MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTWPQALIAREAEFPTGIMLEQHAIAIPHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVAVSLVIALIVENPQQQLKLLRCLFGKLQQPDIVETLITLPETQLKEYFTKYVLDSDE", - "protein_translation_length": 150, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12418" - ], - [ - "gene_synonym", - "ECK2088" - ], - [ - "gene_synonym", - "ASAP:ABE-0006934" - ], - [ - "gene_synonym", - "gatZ" - ], - [ - "gene_synonym", - "b2095" - ], - [ - "gene_synonym", - "NP_416598.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C8J8" - ], - [ - "gene_synonym", - "GeneID:946641" - ], - [ - "gene_synonym", - "GI:16130033" - ], - [ - "gene_synonym", - "JW2082" - ] - ], - "dna_sequence": "ATGAAAACGTTAATTGCCCGGCATAAAGCTGGTGAACATATCGGCATATGTTCAGTCTGTTCTGCCCATCCGTTGGTTATCGAAGCGGCGCTGGCATTTGATCGCAACAGCACGCGCAAAGTGCTGATTGAAGCAACGTCAAACCAGGTCAATCAATTTGGCGGTTATACCGGAATGACACCGGCAGACTTTCGCGAATTTGTTTTTACGATTGCCGATAAAGTTGGGTTTGCACGCGAACGCATTATTCTCGGCGGCGATCATCTGGGGCCAAACTGCTGGCAGCAAGAAAATGCGGATGCGGCGATGGAAAAATCCGTCGAGCTGGTAAAGGAATATGTTCGTGCCGGCTTCAGTAAAATTCATCTTGATGCGTCAATGTCCTGCGCGGGGGATCCCATACCGTTAGCACCAGAAACGGTTGCGGAACGAGCTGCTGTGCTTTGCTTTGCTGCGGAAAGTGTGGCGACAGATTGCCAGCGTGAGCAACTGAGCTATGTCATTGGCACCGAAGTTCCGGTTCCGGGCGGTGAGGCCAGCGCCATTCAGTCAGTACACATCACCCATGTTGAAGATGCCGCCAATACTTTACGTACGCATCAAAAGGCCTTTATTGCCCGTGGGCTGACAGAGGCGTTAACACGTGTGATTGCCATCGTGGTGCAGCCGGGTGTGGAATTTGATCACAGCAATATTATCCATTATCAGCCGCAGGAAGCGCAGCCGCTGGCGCAATGGATAGAAAACACCCGAATGGTTTATGAAGCACATTCTACCGATTACCAGACCCGGACGGCTTATTGGGAATTAGTCCGCGATCACTTTGCAATATTGAAAGTCGGTCCCGCATTAACCTTTGCTTTACGCGAGGCGATATTTGCACTGGCACAAATTGAGCAGGAACTTATCGCCCCTGAAAATCGCAGCGGTTGCCTGGCGGTAATTGAAGAAGTGATGCTCGACGAACCGCAATACTGGAAAAAATATTATCGTACGGGTTTTAACGATTCATTACTGGATATTCGTTACAGCCTGTCGGATCGTATTCGTTATTACTGGCCGCATAGTCGGATTAAAAATAGCGTCGAAACGATGATGGTGAATCTTGAAGGCGTGGACATCCCACTGGGCATGATTAGTCAGTATCTTCCCAAACAATTTGAACGCATTCAGTCCGGGGAATTATCAGCAATACCGCATCAGCTGATTATGGATAAAATTTATGATGTTTTGCGCGCCTATCGCTACGGCTGTGCGGAATAA", - "dna_sequence_length": 1263, - "functions": [ - "D-tagatose 1,6-bisphosphate aldolase 2, subunit" - ], - "id": "CDS_2080", - "location": [ - [ - "NC_000913", - 2176321, - "-", - 1263 - ] - ], - "md5": "5780473c72395027f09b68aae5630bb6", - "parent_gene": "", - "protein_md5": "ed097c9ccd7ba8c0bcdef3e6f706a3e2", - "protein_translation": "MKTLIARHKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMTPADFREFVFTIADKVGFARERIILGGDHLGPNCWQQENADAAMEKSVELVKEYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQREQLSYVIGTEVPVPGGEASAIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEAQPLAQWIENTRMVYEAHSTDYQTRTAYWELVRDHFAILKVGPALTFALREAIFALAQIEQELIAPENRSGCLAVIEEVMLDEPQYWKKYYRTGFNDSLLDIRYSLSDRIRYYWPHSRIKNSVETMMVNLEGVDIPLGMISQYLPKQFERIQSGELSAIPHQLIMDKIYDVLRAYRYGCAE", - "protein_translation_length": 420, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12419" - ], - [ - "gene_synonym", - "ECK2089" - ], - [ - "gene_synonym", - "b2096" - ], - [ - "gene_synonym", - "gatY" - ], - [ - "gene_synonym", - "JW5343" - ], - [ - "gene_synonym", - "ASAP:ABE-0006938" - ], - [ - "gene_synonym", - "GeneID:946636" - ], - [ - "gene_synonym", - "GI:90111384" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C8J6" - ], - [ - "gene_synonym", - "NP_416599.2" - ], - [ - "gene_synonym", - "yegF" - ] - ], - "dna_sequence": "ATGTACGTGGTATCGACAAAGCAGATGCTGAACAACGCACAGCGCGGCGGTTATGCGGTTCCGGCATTCAATATTCACAATCTCGAAACGATGCAAGTGGTGGTAGAAACCGCTGCCAACCTGCATGCGCCGGTCATCATCGCCGGAACGCCTGGCACATTTACTCATGCTGGTACAGAAAATCTGTTGGCGCTGGTCAGCGCGATGGCGAAGCAATATCACCATCCACTGGCAATTCATCTCGACCATCACACGAAATTTGACGATATCGCTCAGAAGGTTCGTTCTGGCGTGCGCTCAGTCATGATTGACGCCTCGCATTTGCCTTTTGCGCAAAATATTTCACGGGTCAAAGAGGTGGTGGATTTTTGCCATCGCTTTGATGTCAGCGTCGAGGCGGAGCTGGGGCAACTTGGCGGCCAGGAAGATGATGTGCAAGTCAATGAAGCCGATGCGTTGTACACCAACCCCGCTCAGGCGCGTGAATTTGCCGAGGCAACCGGAATTGATTCCCTGGCGGTCGCCATCGGCACGGCTCATGGGATGTATGCCAGCGCACCGGCGCTTGATTTTTCTAGACTGGAGAACATTCGCCAGTGGGTGAACTTACCGCTGGTGCTGCATGGCGCGTCAGGGTTATCGACTAAGGATATTCAGCAAACCATCAAACTGGGGATATGCAAAATCAACGTTGCAACGGAGCTGAAAAATGCCTTCTCGCAGGCGTTAAAAAATTACCTGACCGAGCACCCTGAAGCGACCGATCCCCGGGATTATTTGCAGTCGGCTAAATCCGCAATGCGCGATGTGGTGAGCAAAGTGATTGCCGATTGTGGCTGCGAGGGCAGGGCATAA", - "dna_sequence_length": 855, - "functions": [ - "D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit" - ], - "id": "CDS_2081", - "location": [ - [ - "NC_000913", - 2177204, - "-", - 855 - ] - ], - "md5": "8017bbd8784da8c020a40eb520c0b904", - "parent_gene": "", - "protein_md5": "97eec5ebfd52df21f970f2ab55a49582", - "protein_translation": "MYVVSTKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAANLHAPVIIAGTPGTFTHAGTENLLALVSAMAKQYHHPLAIHLDHHTKFDDIAQKVRSGVRSVMIDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEADALYTNPAQAREFAEATGIDSLAVAIGTAHGMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDIQQTIKLGICKINVATELKNAFSQALKNYLTEHPEATDPRDYLQSAKSAMRDVVSKVIADCGCEGRA", - "protein_translation_length": 284, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "dhnA" - ], - [ - "gene_synonym", - "b2097" - ], - [ - "gene_synonym", - "NP_416600.4" - ], - [ - "gene_synonym", - "ECK2090" - ], - [ - "gene_synonym", - "EcoGene:EG14062" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A991" - ], - [ - "gene_synonym", - "ASAP:ABE-0006941" - ], - [ - "gene_synonym", - "fbaB" - ], - [ - "gene_synonym", - "GeneID:946632" - ], - [ - "gene_synonym", - "GI:90111385" - ], - [ - "gene_synonym", - "JW5344" - ] - ], - "dna_sequence": "ATGACAGATATTGCGCAGTTGCTTGGCAAAGACGCCGACAACCTTTTACAGCACCGTTGTATGACAATTCCTTCTGACCAGCTTTATCTCCCCGGACATGACTACGTAGACCGCGTAATGATTGACAATAATCGCCCGCCAGCGGTGTTACGTAATATGCAGACGTTGTACAACACCGGGCGTCTGGCTGGCACAGGATATCTTTCTATTCTGCCGGTTGACCAGGGCGTTGAGCACTCTGCCGGAGCTTCATTTGCTGCTAACCCGCTCTACTTTGACCCGAAAAACATTGTTGAACTGGCGATCGAAGCGGGCTGTAACTGTGTGGCGTCAACTTACGGCGTGCTGGCGTCGGTATCGCGGCGTTATGCGCATCGCATTCCATTCCTCGTCAAACTTAATCACAACGAGACGCTAAGTTACCCGAATACCTACGATCAAACGCTGTATGCCAGCGTGGAGCAGGCGTTCAACATGGGCGCGGTTGCGGTTGGTGCGACTATCTATTTTGGCTCGGAAGAGTCACGTCGCCAGATTGAAGAAATTTCTGCGGCTTTTGAACGTGCGCACGAGCTGGGTATGGTGACAGTGCTGTGGGCCTATTTGCGTAACTCCGCCTTTAAGAAAGATGGCGTTGATTACCATGTTTCCGCCGACCTGACCGGTCAGGCAAACCATCTGGCGGCAACCATCGGTGCAGATATCGTCAAACAAAAAATGGCGGAAAATAACGGCGGCTATAAAGCAATTAATTACGGTTACACCGACGATCGTGTTTACAGCAAATTGACCAGCGAAAACCCGATTGATCTGGTGCGTTATCAGTTAGCTAACTGCTATATGGGTCGGGCTGGGTTGATAAACTCCGGCGGTGCTGCGGGCGGTGAAACTGACCTCAGCGATGCAGTGCGTACTGCGGTTATCAACAAACGCGCAGGCGGAATGGGGCTGATTCTTGGACGTAAAGCGTTCAAGAAATCGATGGCTGACGGCGTGAAACTGATTAACGCCGTGCAGGACGTTTATCTCGATAGCAAAATTACTATCGCCTGA", - "dna_sequence_length": 1053, - "functions": [ - "fructose-bisphosphate aldolase class I" - ], - "id": "CDS_2082", - "location": [ - [ - "NC_000913", - 2178564, - "-", - 1053 - ] - ], - "md5": "f25e454a820cab8fca0bdf0c962ac885", - "parent_gene": "", - "protein_md5": "4fb159bd103dbaf0e750ffb1d7efc7c4", - "protein_translation": "MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNNRPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAIEAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMGAVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKLINAVQDVYLDSKITIA", - "protein_translation_length": 350, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006946" - ], - [ - "gene_synonym", - "GeneID:946638" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76417" - ], - [ - "gene_synonym", - "b2098" - ], - [ - "gene_synonym", - "ECK2091" - ], - [ - "gene_synonym", - "EcoGene:EG14063" - ], - [ - "gene_synonym", - "NP_416601.1" - ], - [ - "gene_synonym", - "yegT" - ], - [ - "gene_synonym", - "JW2085" - ], - [ - "gene_synonym", - "GI:16130036" - ] - ], - "dna_sequence": "ATGAAAACAACAGCAAAGCTGTCGTTCATGATGTTTGTTGAATGGTTTATCTGGGGCGCGTGGTTTGTGCCATTGTGGTTGTGGTTAAGTAAAAGCGGTTTTAGTGCCGGAGAAATTGGCTGGTCGTATGCCTGTACCGCCATTGCGGCGATCCTGTCGCCAATTCTGGTTGGCTCCATCACTGACCGCTTTTTCTCGGCGCAAAAAGTGCTGGCGGTATTGATGTTCGCAGGCGCGCTGCTGATGTATTTCGCTGCGCAACAGACCACTTTTGCCGGGTTCTTCCCGTTACTGCTGGCCTACTCGCTAACCTATATGCCGACCATTGCGCTGACTAACAGCATCGCTTTTGCCAACGTGCCGGATGTTGAGCGTGATTTCCCGCGCATTCGTGTGATGGGCACTATCGGCTGGATTGCCTCCGGTCTGGCATGTGGTTTCTTGCCGCAAATACTGGGGTATGCCGATATCTCACCGACTAACATCCCGCTGCTGATTACCGCCGGAAGTTCTGCTCTGCTCGGTGTGTTTGCGTTTTTCCTGCCCGACACGCCACCAAAAAGCACCGGCAAAATGGATATTAAAGTCATGCTCGGCCTGGATGCGCTGATCCTGCTGCGCGATAAAAACTTCCTCGTCTTTTTCTTCTGTTCATTCCTGTTTGCGATGCCACTAGCGTTCTATTACATCTTTGCCAACGGTTATCTGACCGAAGTTGGCATGAAAAACGCCACCGGCTGGATGACGCTCGGCCAGTTCTCTGAAATCTTCTTTATGCTGGCATTGCCGTTTTTCACTAAACGCTTTGGTATCAAAAAGGTATTATTGCTTGGTCTGGTCACCGCTGCGATCCGCTATGGCTTCTTTATTTACGGTAGTGCGGATGAATATTTCACCTACGCGTTACTGTTCCTCGGTATTTTGCTTCACGGCGTAAGTTACGATTTTTACTACGTTACCGCTTACATCTATGTCGATAAAAAAGCCCCCGTGCATATGCGTACCGCTGCGCAGGGGCTGATCACGCTCTGCTGCCAGGGCTTCGGCAGTTTGCTCGGCTATCGTCTTGGCGGTGTGATGATGGAAAAGATGTTCGCTTATCAGGAACCGGTAAACGGACTGACTTTCAACTGGTCCGGGATGTGGACTTTCGGCGCGGTGATGATTGCCATTATCGCCGTGCTGTTCATGATTTTTTTCCGCGAATCCGACAACGAAATTACGGCTATCAAGGTCGATGATCGCGATATTGCGTTGACACAAGGGGAAGTTAAATGA", - "dna_sequence_length": 1278, - "functions": [ - "nucleoside transporter, low affinity" - ], - "id": "CDS_2083", - "location": [ - [ - "NC_000913", - 2178821, - "+", - 1278 - ] - ], - "md5": "fba61537ceb623ccd9ec13244f20d68b", - "parent_gene": "", - "protein_md5": "f5b5bd25d1f3bbc62cf55475dfb9a5e9", - "protein_translation": "MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYACTAIAAILSPILVGSITDRFFSAQKVLAVLMFAGALLMYFAAQQTTFAGFFPLLLAYSLTYMPTIALTNSIAFANVPDVERDFPRIRVMGTIGWIASGLACGFLPQILGYADISPTNIPLLITAGSSALLGVFAFFLPDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCSFLFAMPLAFYYIFANGYLTEVGMKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLLLGLVTAAIRYGFFIYGSADEYFTYALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMRTAAQGLITLCCQGFGSLLGYRLGGVMMEKMFAYQEPVNGLTFNWSGMWTFGAVMIAIIAVLFMIFFRESDNEITAIKVDDRDIALTQGEVK", - "protein_translation_length": 425, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006948" - ], - [ - "gene_synonym", - "EcoGene:EG14064" - ], - [ - "gene_synonym", - "b2099" - ], - [ - "gene_synonym", - "GeneID:946630" - ], - [ - "gene_synonym", - "ECK2092" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76418" - ], - [ - "gene_synonym", - "yegU" - ], - [ - "gene_synonym", - "NP_416602.1" - ], - [ - "gene_synonym", - "JW2086" - ], - [ - "gene_synonym", - "GI:16130037" - ] - ], - "dna_sequence": "ATGAAAACAGAACGTATTCTCGGTGCTCTTTATGGGCAGGCGTTAGGGGATGCGATGGGGATGCCCTCCGAGCTTTGGCCACGCAGCCGCGTTAAAGCACACTTTGGCTGGATTGACCGTTTTCTTCCTGGACCAAAGGAGAATAACGCGGCCTGTTATTTTAACCGCGCCGAATTCACCGACGATACCTCGATGGCGCTGTGTCTGGCGGATGCGTTACTGGAACGTGAAGGCAAGATCGATCCGGATCTGATTGGGCGTAATATTCTCGACTGGGCGCTGCGTTTCGACGCCTTTAACAAAAACGTACTAGGTCCGACCTCGAAGATTGCGCTTAACGCCATTCGCGACGGTAAACCCGTTGCTGAACTGGAAAACAACGGCGTGACCAACGGCGCAGCGATGCGCGTCTCGCCATTAGGTTGTTTGCTTCCGGCGCGTGATGTTGATTCCTTTATTGATGATGTAGCGCTGGCGTCCAGCCCGACCCATAAATCCGATCTGGCGGTTGCAGGCGCGGTAGTCATCGCATGGGCGATTTCTCGTGCCATTGACGGAGAAAGCTGGTCAGCGATTGTTGATTCCCTGCCTTCAATTGCGCGACATGCACAGCAAAAACGCATCACTACGTTCAGCGCCTCACTGGCGGCGCGGCTGGAGATTGCGCTGAAAATTGTGCGCAATGCCGACGGCACCGAATCCGCCAGCGAACAGCTTTACCAGGTCGTTGGCGCAGGTACCAGCACTATTGAGTCCGTTCCGTGCGCCATTGCGCTGGTTGAACTGGCACAAACCGACCCGAATCGCTGCGCCGTCCTGTGCGCTAACCTTGGCGGCGACACAGACACCATCGGTGCTATGGCGACGGCAATTTGCGGCGCGTTGCATGGCGTTAACGCTATCGATCCTGCGTTAAAGGCGGAACTGGATGCGGTAAATCAGCTTGATTTCAACCGCTATGCCACAGCGCTGGCGAAATATCGTCAACAACGGGAGGCGGTATGA", - "dna_sequence_length": 1005, - "functions": [ - "ADP-ribosylglycohydrolase family protein" - ], - "id": "CDS_2084", - "location": [ - [ - "NC_000913", - 2180095, - "+", - 1005 - ] - ], - "md5": "9b73a6191b259a0728a7ba10bac7b94c", - "parent_gene": "", - "protein_md5": "174e44157200e51d2a1bf67554fd6312", - "protein_translation": "MKTERILGALYGQALGDAMGMPSELWPRSRVKAHFGWIDRFLPGPKENNAACYFNRAEFTDDTSMALCLADALLEREGKIDPDLIGRNILDWALRFDAFNKNVLGPTSKIALNAIRDGKPVAELENNGVTNGAAMRVSPLGCLLPARDVDSFIDDVALASSPTHKSDLAVAGAVVIAWAISRAIDGESWSAIVDSLPSIARHAQQKRITTFSASLAARLEIALKIVRNADGTESASEQLYQVVGAGTSTIESVPCAIALVELAQTDPNRCAVLCANLGGDTDTIGAMATAICGALHGVNAIDPALKAELDAVNQLDFNRYATALAKYRQQREAV", - "protein_translation_length": 334, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0006950" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76419" - ], - [ - "gene_synonym", - "NP_416603.1" - ], - [ - "gene_synonym", - "GeneID:946637" - ], - [ - "gene_synonym", - "ECK2093" - ], - [ - "gene_synonym", - "b2100" - ], - [ - "gene_synonym", - "GI:16130038" - ], - [ - "gene_synonym", - "yegV" - ], - [ - "gene_synonym", - "EcoGene:EG14065" - ], - [ - "gene_synonym", - "JW2087" - ] - ], - "dna_sequence": "ATGAGCGGCGCTCGATTACACACGCTGCTGCCTGAATTAACCACGCGTCAGTCGGTGATGGTCGTCGGCGCGGCGGTCATTGACGTGATCGCCGACGCTTATGCCCTCCCCTGGCGTGGGTGCGATATCGAACTGAAACAGCAGAGCGTTAACGTTGGCGGCTGCGCACTGAATATTGCCGTGGCGTTAAAGCGCCTCGGCATCGAAGCGGGTAATGCCTTGCCGCTCGGTCAGGGCGTGTGGGCGGAGATGATTCGCAACCGGATGGCAAAAGAGGGCTTAATCAGCCTGATCGATAACGCCGAAGGTGATAACGGCTGGTGTCTGGCGCTGGTTGAGCCGGATGGCGAACGCACTTTTATGTCATTCAGCGGTGTTGAAAATCAGTGGAATCGCCAGTGGCTGGCGCGATTAACCGTTGCGCCTGGCAGCCTGCTCTATTTTTCCGGTTATCAACTGGCCTCGCCCTGCGGCGAATTGTTAGTGGAATGGCTGGAAGAGCTGCAAGACGTGACGCCGTTTATCGATTTTGGCCCACGTATTGGCGATATCCCGGATGCATTACTGGCGCGGATCATGGCCTGTCGACCTTTAGTGTCGCTCAATCGTCAAGAGGCTGAGATTGCCGCCGAACGTTTTGCTTTATCCGCAGAGATAACAACACTTGGCAAGCAATGGCAGGAGAAATTTGCCGCGCCGTTGATCGTTCGTCTCGATAAAGAAGGCGCATGGTATTTCAGCAACGACGCTTCTGGCTGCATTCCGGCATTTCCAACGCAAGTTGTCGACACCATTGGGGCGGGCGACAGTCATGCCGGTGGCGTACTTGCCGGGCTGGCCTCTGGTCTGCCACTGGCGGATGCCGTATTACTGGGCAATGCAGTGGCGTCGTGGGTTGTCGGGCATCGGGGCGGTGATTGTGCGCCAACGCGCGAGGAACTACTCCTCGCACACAAAAACGTATAG", - "dna_sequence_length": 966, - "functions": [ - "putative kinase" - ], - "id": "CDS_2085", - "location": [ - [ - "NC_000913", - 2181096, - "+", - 966 - ] - ], - "md5": "d56c4170cb1e640aad270bda85b7ed70", - "parent_gene": "", - "protein_md5": "b8391cec0c6fc1ed6169c96704329db9", - "protein_translation": "MSGARLHTLLPELTTRQSVMVVGAAVIDVIADAYALPWRGCDIELKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGVWAEMIRNRMAKEGLISLIDNAEGDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGELLVEWLEELQDVTPFIDFGPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAEITTLGKQWQEKFAAPLIVRLDKEGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVLAGLASGLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKNV", - "protein_translation_length": 321, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946639" - ], - [ - "gene_synonym", - "ECK2094" - ], - [ - "gene_synonym", - "EcoGene:EG14066" - ], - [ - "gene_synonym", - "GI:16130039" - ], - [ - "gene_synonym", - "b2101" - ], - [ - "gene_synonym", - "ASAP:ABE-0006952" - ], - [ - "gene_synonym", - "NP_416604.1" - ], - [ - "gene_synonym", - "JW2088" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACM5" - ], - [ - "gene_synonym", - "yegW" - ] - ], - "dna_sequence": "ATGGAACAAGCGCATACCCAGCTGATTGCCCAACTGAACGAGCGTATTTTAGCGGCGGATAACACGCCGCTTTATATTAAGTTTGCCGAAACGGTAAAAAATGCCGTGCGCAGCGGGGTGCTGGAGCATGGCAATATTTTGCCCGGTGAGCGTGATTTAAGTCAGTTAACCGGCGTTTCGCGCATTACGGTGCGCAAGGCGATGCAGGCGCTGGAAGAAGAGGGTGTGGTGACGCGTTCGCGCGGTTACGGCACGCAGATCAACAACATCTTCGAATACTCGTTGAAAGAAGCGCGAGGTTTTTCTCAGCAGGTGGTATTGCGCGGGAAAAAGCCCGATACGCTATGGGTTAACAAGCGTGTCGTGAAATGTCCCGAAGAAGTCGCGCAGCAGCTGGCGGTCGAAGCAGGAAGTGATGTCTTTTTGCTTAAGCGTATTCGCTATGTCGATGAAGAAGCGGTATCGATTGAGGAATCGTGGGTTCCGGCGCATTTAATTCATGATGTTGATGCCATCGGGATTTCACTTTATGACTATTTCCGCAGCCAGCACATTTACCCACAACGTACGCGTTCCCGCGTTAGCGCCCGGATGCCGGATGCCGAGTTTCAGTCACATATTCAGTTAGATAGCAAAATACCGGTGCTGGTGATCAAGCAAGTGGCGCTTGACCAACAGCAACGGCCTATTGAGTACAGCATTAGCCACTGTCGCAGCGATCTATACGTTTTTGTGTGCGAGGAGTAG", - "dna_sequence_length": 747, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_2086", - "location": [ - [ - "NC_000913", - 2182781, - "-", - 747 - ] - ], - "md5": "b6a42f0b4691b90928905ec8de808fa3", - "parent_gene": "", - "protein_md5": "e7651cd274047e1c6cfe7a7008bcbc94", - "protein_translation": "MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHGNILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARGFSQQVVLRGKKPDTLWVNKRVVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESWVPAHLIHDVDAIGISLYDYFRSQHIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLVIKQVALDQQQRPIEYSISHCRSDLYVFVCEE", - "protein_translation_length": 248, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76421" - ], - [ - "gene_synonym", - "ECK2095" - ], - [ - "gene_synonym", - "NP_416605.2" - ], - [ - "gene_synonym", - "JW5345" - ], - [ - "gene_synonym", - "GeneID:945543" - ], - [ - "gene_synonym", - "b2102" - ], - [ - "gene_synonym", - "ASAP:ABE-0006955" - ], - [ - "gene_synonym", - "GI:90111386" - ], - [ - "gene_synonym", - "yegX" - ], - [ - "gene_synonym", - "EcoGene:EG14067" - ] - ], - 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"-", - 819 - ] - ], - "md5": "0a24977464946cc560fcc9d266ba5eba", - "parent_gene": "", - "protein_md5": "cd7b18785ef87c8c016d99288a503dd1", - "protein_translation": "MQLRITSRKKLTSLLCALGLISIVAIYPRQTVNFFYSTAVQITDYIHFYGYRPVKSFAIRIPASYTIHGIDVSRWQERIDWQRVAKMRDNGIRLQFAFIKATEGEKLVDPYFSRNWQLSRENGLLRGAYHYFSPSVSASVQARLFLQTVDFSQGDFPAVLDVEERGKLSAKELRKRVSQWLKMVEKSTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAHYYQRRPDNDGMAWRFWQHSDRGQVDGINGPVDFNVFNGTVEELQAFVDGIKETP", - "protein_translation_length": 272, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76422" - ], - [ - "gene_synonym", - "GeneID:946459" - ], - [ - "gene_synonym", - "NP_416606.1" - ], - [ - "gene_synonym", - "GI:16130041" - ], - [ - "gene_synonym", - "ECK2096" - ], - [ - "gene_synonym", - "thiJ" - ], - [ - "gene_synonym", - "b2103" - ], - [ - "gene_synonym", - "thiN" - ], - [ - "gene_synonym", - "ASAP:ABE-0006958" - ], - [ - "gene_synonym", - "thiA" - ], - [ - "gene_synonym", - "EcoGene:EG14068" - ], - [ - "gene_synonym", - "JW2090" - ], - [ - "gene_synonym", - "thiD" - ] - ], - "dna_sequence": "ATGAAACGAATTAACGCTCTGACGATTGCCGGTACTGATCCGAGTGGTGGTGCGGGGATTCAGGCCGATCTTAAAACCTTCTCGGCACTTGGCGCTTATGGTTGCTCAGTTATTACTGCACTGGTGGCGCAAAATACCCGTGGCGTACAGTCGGTGTATCGCATTGAGCCTGATTTTGTCGCCGCCCAGCTCGATTCGGTGTTCAGCGATGTGCGAATCGATACCACTAAAATCGGTATGCTGGCGGAAACCGATATTGTTGAAGCGGTGGCAGAACGGTTGCAACGTTATCAGATCCAAAACGTGGTACTCGACACCGTTATGCTGGCAAAAAGCGGCGACCCGCTGCTTTCACCTTCGGCGGTTGCTACGCTGCGCAGTCGATTATTGCCACAGGTTTCATTAATAACGCCAAACTTGCCCGAAGCTGCCGCCTTGCTCGACGCGCCACACGCGCGCACCGAACAGGAAATGCTGGAACAAGGGCGATCGCTGTTGGCGATGGGCTGTGGCGCAGTGCTAATGAAAGGTGGTCATCTGGATGATGAGCAAAGCCCGGACTGGCTGTTTACCCGCGAGGGTGAACAACGGTTTACCGCACCGCGCATTATGACCAAAAACACCCACGGCACTGGTTGTACACTCTCTGCGGCGTTGGCTGCACTACGCCCGCGCCATACAAACTGGGCTGACACCGTACAGGAGGCAAAAAGCTGGCTTTCATCGGCGTTAGCCCAGGCCGACACGCTGGAAGTTGGTCACGGTATTGGTCCGGTTCACCACTTCCACGCCTGGTGGTGA", - "dna_sequence_length": 801, - "functions": [ - "hydroxy-methylpyrimidine kinase and 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- "GI:16130042" - ], - [ - "gene_synonym", - "JW2091" - ] - ], - "dna_sequence": "ATGCAAGTCGACCTGCTGGGTTCAGCGCAATCTGCGCACGCGTTACACCTTTTTCACCAACATTCCCCTCTTGTGCACTGCATGACCAATGATGTGGTGCAAACCTTTACCGCCAATACCTTGCTGGCGCTCGGTGCATCGCCAGCGATGGTTATCGAAACCGAAGAGGCCAGTCAGTTTGCGGCTATCGCCAGTGCCTTGTTGATTAACGTTGGCACACTGACGCAGCCACGCGCTCAGGCGATGCGTGCTGCCGTTGAGCAAGCAAAAAGCTCTCAAACACCCTGGACGCTTGATCCAGTAGCGGTGGGTGCGCTCGATTATCGCCGCCATTTTTGTCATGAACTTTTATCTTTTAAACCGGCAGCGATACGTGGTAATGCTTCGGAAATCATGGCATTAGCTGGCATTGCTAATGGCGGACGGGGAGTGGATACCACTGACGCCGCAGCTAACGCGATACCCGCTGCACAAACACTGGCACGGGAAACTGGCGCAATCGTCGTGGTCACTGGCGAGATGGATTATGTTACCGATGGACATCGTATCATTGGTATTCACGGTGGTGATCCGTTAATGACCAAAGTGGTAGGAACTGGCTGTGCATTATCGGCGGTTGTCGCTGCCTGCTGTGCGTTACCAGGCGATACGCTGGAAAATGTCGCATCTGCCTGTCACTGGATGAAACAAGCCGGAGAACGCGCAGTCGCCAGAAGCGAGGGGCCAGGCAGTTTTGTTCCACATTTCCTTGATGCGCTCTGGCAATTGACGCAGGAGGTGCAGGCATGA", - "dna_sequence_length": 789, - "functions": [ - "hydoxyethylthiazole kinase" - ], - "id": "CDS_2089", - "location": [ - [ - "NC_000913", - 2185301, - "-", - 789 - ] - ], - "md5": "105bb3fe2d87ddb15b1afc7e9edc259d", - "parent_gene": "", - "protein_md5": "0524d22822fb3638d60f55dce358b8e5", - "protein_translation": "MQVDLLGSAQSAHALHLFHQHSPLVHCMTNDVVQTFTANTLLALGASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVEQAKSSQTPWTLDPVAVGALDYRRHFCHELLSFKPAAIRGNASEIMALAGIANGGRGVDTTDAAANAIPAAQTLARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVVAACCALPGDTLENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA", - "protein_translation_length": 262, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416608.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64530" - ], - [ - "gene_synonym", - "yohL" - ], - [ - "gene_synonym", - "ECK2098" - ], - [ - "gene_synonym", - "GI:16130043" - ], - [ - "gene_synonym", - "GeneID:947114" - ], - [ - "gene_synonym", - "b2105" - ], - [ - "gene_synonym", - "EcoGene:EG14070" - ], - [ - "gene_synonym", - "JW2092" - ], - [ - "gene_synonym", - "ASAP:ABE-0006964" - ], - [ - "gene_synonym", - "rcnR" - ] - ], - "dna_sequence": "ATGTCTCATACAATCCGTGATAAACAGAAACTGAAAGCGCGTGCCAGTAAGATTCAGGGCCAGGTCGTGGCGCTCAAGAAAATGCTCGACGAGCCGCACGAATGCGCTGCAGTTTTACAACAGATTGCTGCTATCCGTGGCGCGGTAAACGGTCTGATGCGGGAAGTGATTAAAGGTCATCTGACGGAACACATCGTTCACCAGGGGGATGAGCTAAAACGTGAAGAAGATCTGGATGTCGTTCTGAAGGTGCTGGATTCATATATCAAATAA", - "dna_sequence_length": 273, - "functions": [ - "transcriptional repressor of rcnA" - ], - "id": "CDS_2090", - "location": [ - [ - "NC_000913", - 2185796, - "-", - 273 - ] - ], - "md5": "adfa108be1335480b8d365530f799170", - "parent_gene": "", - "protein_md5": "9349b0c023e13e5b28da19a2c598a33c", - "protein_translation": "MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAAIRGAVNGLMREVIKGHLTEHIVHQGDELKREEDLDVVLKVLDSYIK", - "protein_translation_length": 90, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2099" - ], - [ - "gene_synonym", - "yohM" - ], - [ - "gene_synonym", - "ASAP:ABE-0006968" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76425" - ], - [ - "gene_synonym", - "GI:16130044" - ], - [ - "gene_synonym", - "NP_416609.1" - ], - [ - "gene_synonym", - "rcnA" - ], - [ - "gene_synonym", - "EcoGene:EG14071" - ], - [ - "gene_synonym", - "b2106" - ], - [ - "gene_synonym", - "GeneID:949078" - ], - [ - "gene_synonym", - "JW2093" - ] - ], - "dna_sequence": "ATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGTTCTTCATCCCCAGCGCCATCTTACTTGGTGCGCTTCATGGCCTGGAACCAGGGCACTCAAAAACGATGATGGCGGCGTTTATCATCGCCATCAAAGGCACCATTAAACAAGCGGTGATGCTCGGACTGGCAGCAACTATTTCGCATACCGCAGTGGTCTGGTTAATTGCCTTTGGCGGGATGGTGATCAGCAAGCGCTTTACTGCTCAATCAGCAGAACCGTGGCTCCAGCTGATTTCCGCAGTGATCATTATTAGCACCGCGTTCTGGATGTTCTGGCGTACCTGGCGCGGCGAACGCAACTGGCTGGAGAATATGCACGGGCATGATTATGAGCATCATCATCACGATCACGAACATCACCACGACCATGGACATCATCACCATCACGAACATGGCGAGTATCAGGATGCCCATGCACGAGCCCATGCCAATGACATTAAACGACGCTTTGATGGTAGAGAGGTCACCAACTGGCAAATTTTGTTATTTGGCTTAACCGGTGGCCTTATCCCCTGCCCGGCAGCAATTACCGTGCTGTTGATATGCATTCAGTTGAAAGCCCTGACACTGGGCGCAACACTGGTCGTCAGTTTCAGCATTGGCCTGGCGTTAACGCTTGTCACCGTAGGCGTTGGCGCAGCAATCAGCGTTCAGCAGGTCGCAAAACGCTGGAGCGGATTTAACACTCTCGCTAAACGCGCCCCCTATTTTTCCAGTCTGTTGATTGGCTTAGTCGGTGTGTATATGGGCGTACATGGCTTCATGGGCATAATGCGATAA", - "dna_sequence_length": 825, - "functions": [ - "membrane protein conferring nickel and cobalt resistance" - ], - "id": "CDS_2091", - "location": [ - [ - "NC_000913", - 2185917, - "+", - 825 - ] - ], - "md5": "3ac916182a226f5932dada7a201becc4", - "parent_gene": "", - "protein_md5": "8a00e30fae559dd35309c7313b7ce8f7", - "protein_translation": "MTEFTTLLQQGNAWFFIPSAILLGALHGLEPGHSKTMMAAFIIAIKGTIKQAVMLGLAATISHTAVVWLIAFGGMVISKRFTAQSAEPWLQLISAVIIISTAFWMFWRTWRGERNWLENMHGHDYEHHHHDHEHHHDHGHHHHHEHGEYQDAHARAHANDIKRRFDGREVTNWQILLFGLTGGLIPCPAAITVLLICIQLKALTLGATLVVSFSIGLALTLVTVGVGAAISVQQVAKRWSGFNTLAKRAPYFSSLLIGLVGVYMGVHGFMGIMR", - "protein_translation_length": 274, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416610.4" - ], - [ - "gene_synonym", - "GeneID:949080" - ], - [ - "gene_synonym", - "yohN" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64534" - ], - [ - "gene_synonym", - "ECK2100" - ], - [ - "gene_synonym", - "JW5346" - ], - [ - "gene_synonym", - "EcoGene:EG14072" - ], - [ - "gene_synonym", - "rcnB" - ], - [ - "gene_synonym", - "ASAP:ABE-0006970" - ], - [ - "gene_synonym", - "b2107" - ], - [ - "gene_synonym", - "GI:90111387" - ] 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"EcoGene:EG11987" - ], - [ - "gene_synonym", - "GI:16130046" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33340" - ], - [ - "gene_synonym", - "ASAP:ABE-0006972" - ], - [ - "gene_synonym", - "b2108" - ], - [ - "gene_synonym", - "NP_416611.1" - ], - [ - "gene_synonym", - "JW2095" - ], - [ - "gene_synonym", - "GeneID:946642" - ] - ], - "dna_sequence": "ATGGAAATTCGCATAATGCTATTTATATTAATGATGATGGTTATGCCTGTGAGCTATGCGGCATGTTATAGTGAGTTATCTGTTCAGCACAACTTGGTTGTTCAGGGGGATTTTGCACTTACTCAAACACAAATGGCGACATATGAGCATAATTTTAATGATTCGTCATGCGTAAGTACAAATACTATCACCCCTATGAGCCCGTCGGATATTATTGTTGGACTTTATAACGATACCATAAAATTAAATTTACATTTTGAATGGACCAATAAAAACAACATCACGTTGTCAAATAATCAGACCAGTTTCACCAGTGGTTATTCAGTTACGGTGACACCTGCGGCCAGTAATGCAAAAGTGAATGTTTCTGCGGGGGGCGGCGGTTCAGTGATGATTAATGGTGTTGCGACATTATCCAGTGCTTCATCATCGACACGCGGGAGTGCCGCAGTACAATTTCTACTGTGTTTATTAGGTGGCAAGTCATGGGATGCATGTGTAAATAGCTACAGAAATGCATTGGCACAAAATGCAGGTGTCTATTCCTTTAATCTGACATTGTCATACAACCCGATAACCACAACCTGCAAACCGGACGATTTATTAATTACTTTAGACAGTATTCCCGTTTCACAATTACCAGCCACAGGTAACAAAGCAACAATAAATAGTAAACAAGGGGATATTATTCTGCGTTGTAAAAATTTATTAGGTCAACAAAATCAAACATCACGGAAAATGCAGGTGTATTTATCAAGTTCTGACTTGTTAACCAACAGCAACACAATACTGAAAGGTGCGGAAGATAATGGCGTAGGATTTATTCTTGAAAGTAATGGTTCGCCAGTCACACTTTTAAATATCACTAACAGCAGTAAAGGATATACAAATTTAAAGGAAGTTGCGGCGAAGTCAAAACTTACAGATACAACGGTTTCAATTCCGATAACAGCCAGTTACTACGTCTACGATACAAACAAAGTTAAATCTGGCGCACTGGAGGCAACCGCATTAATCAACGTGAAATACGACTAA", 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"ASAP:ABE-0006974" - ], - [ - "gene_synonym", - "NP_416612.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33341" - ], - [ - "gene_synonym", - "JW2096" - ], - [ - "gene_synonym", - "b2109" - ] - ], - "dna_sequence": "ATGTTGAGAATGACCCCACTTGCATCAGCAATCGTAGCGTTATTGCTCGGCATTGAAGCTTATGCAGCTGAAGAAACCTTTGATACCCATTTTATGATAGGTGGAATGAAAGACCAGCAGGTTGCAAATATTCGTCTTGATGATAATCAACCCTTACCGGGGCAGTATGACATCGATATTTATGTCAATAAGCAATGGCGCGGGAAATATGAGATTATTGTTAAAGACAACCCGCAAGAAACATGTTTATCAAGAGAAGTTATCAAGCGGTTAGGCATTAATAGCGATAACTTCGCCAGCGGTAAGCAATGTTTAACATTTGAGCAACTTGTTCAGGGTGGGAGCTATACCTGGGATATCGGGGTTTTTCGTCTCGATTTCAGTGTCCCGCAGGCCTGGGTGGAAGAACTGGAAAGTGGCTATGTTCCACCGGAAAACTGGGAGCGGGGTATTAATGCGTTTTATACCTCTTATTATCTGAGTCAGTATTACAGCGACTATAAAGCGTCGGGTAATAACAAGAGTACATATGTACGTTTTAACAGCGGGTTAAATTTACTGGGGTGGCAACTGCATTCTGATGCCAGTTTCAGTAAAACAAATAACAATCCAGGGGTGTGGAAAAGCAATACCCTGTATCTGGAACGTGGATTTGCCCAACTTCTCGGCACGCTTCGCGTGGGTGATATGTACACATCAAGCGATATTTTTGATTCTGTTCGCTTCAGAGGTGTGCGGTTGTTTCGTGATATGCAGATGTTGCCTAACTCGAAACAAAATTTTACGCCACGGGTGCAGGGGATTGCTCAGAGTAACGCGCTGGTAACTATTGAACAGAATGGTTTTGTGGTTTATCAGAAAGAGGTTCCTCCTGGCCCGTTCGCGATTACAGATTTGCAGTTGGCCGGTGGTGGAGCAGATCTTGATGTCAGCGTGAAAGAGGCGGACGGCTCGGTAACCACCTATCTGGTGCCTTATGCAGCGGTGCCAAATATGCTGCAACCCGGCGTGTCGAAATATGATTTAGCGGCGGGTCGTAGCCATATTGAAGGGGCGAGCAAACAAAGTGATTTTGTCCAGGCGGGTTATCAGTATGGTTTTAATAATTTATTGACGCTGTATGGTGGCTCGATGGTCGCGAATAATTATTACGCGTTTACTTTGGGGGCTGGCTGGAATACACGCATTGGTGCCATTTCCGTCGATGCCACTAAGTCGCATAGTAAACAAGACAACGGCGATGTGTTTGACGGGCAAAGTTATCAAATTGCCTACAACAAATTTGTGAGCCAAACGTCGACGCGTTTTGGTCTGGCGGCCTGGCGTTATTCGTCGCGTGATTACCGGACATTTAACGATCACGTTTGGGCAAACAATAAAGATAATTATCGCCGTGATGAAAACGATGTCTATGACATTGCCGATTATTACCAGAACGATTTTGGCCGCAAAAATAGCTTTTCCGCCAATATGAGCCAGTCATTGCCAGAAGGTTGGGGGTCTGTGTCATTAAGTACGTTATGGCGAGATTACTGGGGGCGTAGCGGCAGTAGTAAGGATTATCAGTTGAGTTATTCCAACAACCTGCGACGGATAAGCTATACCCTCGCGGCAAGCCAGGCTTATGACGAGAATCATCATGAAGAGAAACGTTTTAATATTTTTATATCGATTCCCTTTGATTGGGGTGATGACGTTTCGACGCCTCGTCGGCAAATATATATGTCTAACTCAACGACGTTTGATGATCAGGGGTTTGCCTCAAATAATACGGGATTATCAGGAACAGTAGGGAGTCGGGATCAGTTCAATTATGGTGTCAACCTGAGTCATCAACATCAGGGAAATGAAACGACAGCTGGGGCGAATTTGACCTGGAACGCGCCGGTTGCGACAGTGAATGGCAGTTATAGTCAGTCGAGTACTTATCGACAGGCTGGAGCCAGTGTTTCAGGGGGCATTGTCGCCTGGTCGGGTGGCGTTAATCTGGCGAACCGTCTTTCCGAAACGTTTGCTGTGATGAATGCGCCAGGAATTAAAGATGCTTATGTCAATGGGCAAAAATATCGCACAACAAACCGTAATGGAGTGGTGATATACGACGGAATGACACCTTATCGGGAAAATCACCTGATGCTGGATGTGTCGCAAAGCGATAGCGAAGCAGAATTACGTGGCAACCGGAAAATTGCCGCCCCTTATCGCGGCGCGGTTGTACTGGTTAATTTTGATACCGATCAGCGCAAGCCATGGTTTATAAAAGCGTTAAGAGCAGATGGGCAATCATTAACGTTTGGTTATGAAGTCAATGATATCCATGGTCATAATATTGGCGTTGTCGGCCAGGGAAGTCAGTTATTTATTCGCACCAATGAAGTACCGCCATCGGTTAATGTGGCAATTGATAAGCAACAAGGACTTTCATGCACAATCACCTTCGGTAAAGAGATTGATGAAAGTAGAAATTATATTTGCCAGTAA", 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"MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNFASGKQCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYLSQYYSDYKASGNNKSTYVRFNSGLNLLGWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQLLGTLRVGDMYTSSDIFDSVRFRGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDLAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGSMVANNYYAFTLGAGWNTRIGAISVDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDVYDIADYYQNDFGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNLRRISYTLAASQAYDENHHEEKRFNIFISIPFDWGDDVSTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSHQHQGNETTAGANLTWNAPVATVNGSYSQSSTYRQAGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVIYDGMTPYRENHLMLDVSQSDSEAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQSLTFGYEVNDIHGHNIGVVGQGSQLFIRTNEVPPSVNVAIDKQQGLSCTITFGKEIDESRNYICQ", - "protein_translation_length": 826, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130048" - ], - [ - "gene_synonym", - "yehC" - ], - [ - "gene_synonym", - "EcoGene:EG11989" - ], - [ - "gene_synonym", - "ECK2103" - ], - [ - "gene_synonym", - "GeneID:946621" - ], - [ - "gene_synonym", - "NP_416613.1" - ], - [ - "gene_synonym", - "b2110" - ], - [ - "gene_synonym", - "JW2097" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33342" - ], - [ - "gene_synonym", - "ASAP:ABE-0006978" - ] - ], - "dna_sequence": "ATGGCCGCTATCCCATGGCGGCCTTTTAATTTAAGAGGCATTAAAATGAAAGGATTATTATCTTTACTCATTTTTTCTATGGTCCTTCCTGCACATGCCGGAATTGTTATCTACGGGACGCGCATTATTTACCCGGCAGAAAATAAAGAAGTGATGGTGCAGTTGATGAACCAGGGAAACCGTTCTTCGCTGCTGCAGGCGTGGATTGATGATGGCGATACGTCATTACCACCAGAAAAAATTCAGGTTCCTTTCATGTTAACGCCACCAGTGGCAAAAATAGGGGCAAATTCCGGGCAGCAAGTAAAAATCAAAATTATGCCGAATAAACTGCCCACTAATAAAGAAAGCATTTTTTATCTGAATGTTCTGGATATTCCACCAAATAGTCCAGAGCAAGAAGGTAAGAATGCACTGAAGTTTGCGATGCAAAACAGAATTAAGTTGTTTTACCGGCCAGCGGGTATTGCTCCGGTAAATAAAGCGACATTTAAAAAATTGCTGGTAAATCGCAGTGGCAATGGTTTGGTGATAAAAAATGACTCAGCTAATTGGGTGACGATTTCGGATGTCAAAGCTAATAATGTCAAAGTCAATTATGAAACTATTATGATTGCCCCCTTAGAAAGTCAGAGTGTTAATGTCAAAAGTAATAATGCAAATAACTGGCATCTGACCATTATCGATGACCATGGCAACTATATTAGTGACAAAATTTAA", - "dna_sequence_length": 720, - "functions": [ - "putative periplasmic pilin chaperone" - ], - "id": "CDS_2095", - "location": [ - [ - "NC_000913", - 2191645, - "-", - 720 - ] - ], - "md5": "b61c5dacf18297f422943e3b4854bbea", - "parent_gene": "", - "protein_md5": "ff30404b087f6dce02e59d0bf35809ad", - "protein_translation": "MAAIPWRPFNLRGIKMKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPNKLPTNKESIFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNGLVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANNWHLTIIDDHGNYISDKI", - "protein_translation_length": 239, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130049" - ], - [ - "gene_synonym", - "GeneID:946619" - ], - [ - "gene_synonym", - "NP_416614.1" - ], - [ - "gene_synonym", - "b2111" - ], - [ - "gene_synonym", - "yehD" - ], - [ - "gene_synonym", - "EcoGene:EG11990" - ], - [ - "gene_synonym", - "ECK2104" - ], - [ - "gene_synonym", - "JW2098" - ], - [ - "gene_synonym", - "ASAP:ABE-0006980" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33343" - ] - ], - "dna_sequence": "ATGAAACGTTCAATTATTGCTGCCGCTGTCTTTTCTTCTTTTTTTATGAGCGCTGGAGTATTTGCTGCAGACGTTGATACCGGAACATTAACTATTAAGGGGAATATTGCAGAATCTCCGTGTAAATTCGAAGCGGGTGGTGATTCAGTAAGTATTAATATGCCGACTGTACCAACCAGTGTCTTTGAAGGTAAAGCTAAATATTCTACCTATGATGATGCAGTCGGTGTAACCAGCAGCATGTTAAAAATTAGCTGCCCGAAAGAAGTTGCTGGTGTAAAACTCTCGTTGATTACCAACGATAAAATAACCGGTAACGATAAGGCGATAGCCAGTAGCAACGATACCGTGGGTTACTATCTCTATTTAGGTGATAACAGCGATGTCCTGGATGTTTCTGCACCTTTTAACATTGAGAGTTATAAAACAGCGGAAGGTCAATATGCTATTCCGTTTAAAGCAAAATACCTGAAACTGACAGATAACTCAGTGCAATCAGGTGATGTGTTATCTTCTCTGGTTATGCGTGTGGCGCAGGATTAA", - "dna_sequence_length": 543, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_2096", - "location": [ - [ - "NC_000913", - 2192222, - "-", - 543 - ] - ], - "md5": "8508dd629a2aa46a345f8a2b76b59559", - "parent_gene": "", - "protein_md5": "f575c7cf00a35e8e77941d05f3aef7a8", - "protein_translation": "MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSVSINMPTVPTSVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDKITGNDKAIASSNDTVGYYLYLGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQSGDVLSSLVMRVAQD", - "protein_translation_length": 180, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416615.1" - ], - [ - "gene_synonym", - "yehE" - ], - [ - "gene_synonym", - "GI:16130050" - ], - [ - "gene_synonym", - "EcoGene:EG11991" - ], - [ - "gene_synonym", - "ECK2105" - ], - [ - "gene_synonym", - "ASAP:ABE-0006984" - ], - [ - "gene_synonym", - "b2112" - ], - [ - "gene_synonym", - "JW2099" - ], - [ - "gene_synonym", - "GeneID:946615" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33344" - ] - ], - "dna_sequence": "ATGAATAAGTATTGGCTGTCAGGAATTATTTTTCTTGCCTATGGATTGGCTTCTCCCGCATTCTCTTCAGAGACTGCCACATTAGCGATTAATGGCAGGATCAGTCCCCCAACATGCAGTATGGCTATGGTTAATGGTCAACCTCAACAGCATTGTGGTCAGTTAACGTATAATGTTGACACCCGTCATCTGTTTTCTTCGCCCGTCAAAGGTGTAACGACAGAAGTGGTTGTTGCAGGTAGCGATAGCAAACGTCGAATCGTGTTAAATCGCTACGATTAA", - "dna_sequence_length": 282, - "functions": [ - "DUF2574 family protein" - ], - "id": "CDS_2097", - "location": [ - [ - "NC_000913", - 2192796, - "-", - 282 - ] - ], - "md5": "5cc53c04be461fe87ba561e8cb1a41e6", - "parent_gene": "", - "protein_md5": "514eb4d6bbe43a7c253e4501aa7a81ad", - "protein_translation": "MNKYWLSGIIFLAYGLASPAFSSETATLAINGRISPPTCSMAMVNGQPQQHCGQLTYNVDTRHLFSSPVKGVTTEVVVAGSDSKRRIVLNRYD", - "protein_translation_length": 93, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10611" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF08" - ], - [ - "gene_synonym", - "GeneID:946627" - ], - [ - "gene_synonym", - "mrp" - ], - [ - "gene_synonym", - "ECK2106" - ], - [ - "gene_synonym", - "ASAP:ABE-0006987" - ], - [ - "gene_synonym", - "GI:90111388" - ], - [ - "gene_synonym", - "NP_416616.4" - ], - [ - "gene_synonym", - "apbC" - ], - [ - "gene_synonym", - "b2113" - ], - [ - "gene_synonym", - "JW2100" - ] - ], - "dna_sequence": "ATGAACGAACAATCCCAGGCCAAATCACCAGAAGCCTTGCGCGCAATGGTCGCCGGGACACTGGCCAATTTTCAGCACCCAACCCTGAAGCATAACCTCACCACGCTGAAAGCGTTGCACCATGTCGCCTGGATGGACGACACGTTGCATGTGGAACTGGTTATGCCGTTTGTCTGGCATAGCGCGTTCGAAGAGTTAAAAGAGCAATGTAGCGCCGAACTGCTGCGCATCACCGGGGCGAAAGCTATCGACTGGAAACTGTCGCATAACATAGCCACTCTGAAACGCGTGAAGAATCAGCCGGGAATTAACGGTGTGAAGAACATTATCGCGGTGAGTTCCGGTAAAGGCGGCGTGGGTAAATCGTCCACGGCGGTAAACCTGGCACTGGCGCTGGCGGCAGAAGGGGCGAAAGTCGGCATTCTGGACGCCGATATCTACGGCCCATCAATCCCAACAATGTTGGGCGCAGAAAATCAGCGTCCAACTTCGCCGGACGGTACCCATATGGCACCGATTATGTCTCATGGCCTGGCAACCAATTCAATTGGTTATCTGGTCACTGACGACAATGCGATGGTGTGGCGTGGACCGATGGCGAGCAAGGCGTTAATGCAGATGTTGCAGGAAACCTTGTGGCCGGATCTCGACTATCTGGTGCTTGATATGCCGCCAGGCACCGGTGACATTCAATTGACGCTGGCGCAAAACATTCCAGTAACCGGTGCAGTCGTGGTCACCACCCCGCAGGACATCGCGCTGATCGATGCGAAAAAAGGCATTGTGATGTTCGAGAAAGTCGAGGTTCCGGTGCTCGGTATTGTCGAGAACATGAGTGTGCATATTTGCAGTAACTGTGGTCACCATGAACCGATTTTCGGTACCGGTGGTGCAGAGAAACTGGCTGAAAAATACCATACACAGCTGCTGGGGCAGATGCCGTTACACATCTCCTTACGTGAGGATCTCGATAAAGGTACGCCAACGGTTATCAGCCGTCCGGAGAGCGAATTTACCGCTATCTACCGCCAGCTGGCTGACCGCGTTGCAGCTCAGCTCTACTGGCAGGGTGAAGTCATTCCAGGCGAGATTTCCTTCCGCGCGGTCTAA", - "dna_sequence_length": 1110, - "functions": [ - "antiporter inner membrane protein" - ], - "id": "CDS_2098", - "location": [ - [ - "NC_000913", - 2194168, - "-", - 1110 - ] - ], - "md5": "caae1c2dfc04ba5f53dd40e9ff11ae46", - "parent_gene": "", - "protein_md5": "3a5efd80dc8fbaa7a0757ad4a1d6d1d5", - "protein_translation": "MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAWMDDTLHVELVMPFVWHSAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPGINGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQRPTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRPESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV", - "protein_translation_length": 369, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946643" - ], - [ - "gene_synonym", - "GI:16130052" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00959" - ], - [ - "gene_synonym", - "ECK2107" - ], - [ - "gene_synonym", - "b2114" - ], - [ - "gene_synonym", - "NP_416617.1" - ], - [ - "gene_synonym", - "metG" - ], - [ - "gene_synonym", - "EcoGene:EG10586" - ], - [ - "gene_synonym", - "JW2101" - ], - [ - "gene_synonym", - "ASAP:ABE-0006991" - ] - ], - "dna_sequence": "ATGACTCAAGTCGCGAAGAAAATTCTGGTGACGTGCGCACTGCCGTACGCTAACGGCTCAATCCACCTCGGCCATATGCTGGAGCACATCCAGGCTGATGTCTGGGTCCGTTACCAGCGAATGCGCGGCCACGAGGTCAACTTCATCTGCGCCGACGATGCCCACGGTACACCGATCATGCTGAAAGCTCAGCAGCTTGGTATCACCCCGGAGCAGATGATTGGCGAAATGAGTCAGGAGCATCAGACTGATTTCGCAGGCTTTAACATCAGCTATGACAACTATCACTCGACGCACAGCGAAGAGAACCGCCAGTTGTCAGAACTTATCTACTCTCGCCTGAAAGAAAACGGTTTTATTAAAAACCGCACCATCTCTCAGCTGTACGATCCGGAAAAAGGCATGTTCCTGCCGGACCGTTTTGTGAAAGGCACCTGCCCGAAATGTAAATCCCCGGATCAATACGGCGATAACTGCGAAGTCTGCGGCGCGACCTACAGCCCGACTGAACTGATCGAGCCGAAATCGGTGGTTTCTGGCGCTACGCCGGTAATGCGTGATTCTGAACACTTCTTCTTTGATCTGCCCTCTTTCAGCGAAATGTTGCAGGCATGGACCCGCAGCGGTGCGTTGCAGGAGCAGGTGGCAAATAAAATGCAGGAGTGGTTTGAATCTGGCCTGCAACAGTGGGATATCTCCCGCGACGCCCCTTACTTCGGTTTTGAAATTCCGAACGCGCCGGGCAAATATTTCTACGTCTGGCTGGACGCACCGATTGGCTACATGGGTTCTTTCAAGAATCTGTGCGACAAGCGCGGCGACAGCGTAAGCTTCGATGAATACTGGAAGAAAGACTCCACCGCCGAGCTGTACCACTTCATCGGTAAAGATATTGTTTACTTCCACAGCCTGTTCTGGCCTGCCATGCTGGAAGGCAGCAACTTCCGCAAGCCGTCCAACCTGTTTGTTCATGGCTATGTGACGGTGAACGGCGCAAAGATGTCCAAGTCTCGCGGCACCTTTATTAAAGCCAGCACCTGGCTGAATCATTTTGACGCAGACAGCCTGCGTTACTACTACACTGCGAAACTCTCTTCGCGCATTGATGATATCGATCTCAACCTGGAAGATTTCGTTCAGCGTGTGAATGCCGATATCGTTAACAAAGTGGTTAACCTGGCCTCCCGTAATGCGGGCTTTATCAACAAGCGTTTTGACGGCGTGCTGGCAAGCGAACTGGCTGACCCGCAGTTGTACAAAACCTTCACTGATGCCGCTGAAGTGATTGGTGAAGCGTGGGAAAGCCGTGAATTTGGTAAAGCCGTGCGCGAAATCATGGCGCTGGCTGATCTGGCTAACCGCTATGTCGATGAACAGGCTCCGTGGGTGGTGGCGAAACAGGAAGGCCGCGATGCCGACCTGCAGGCAATTTGCTCAATGGGCATCAACCTGTTCCGCGTGCTGATGACTTACCTGAAGCCGGTACTGCCGAAACTGACCGAGCGTGCAGAAGCATTCCTCAATACGGAACTGACCTGGGATGGTATCCAGCAACCGCTGCTGGGCCACAAAGTGAATCCGTTCAAGGCGCTGTATAACCGCATCGATATGAGGCAGGTTGAAGCACTGGTGGAAGCCTCTAAAGAAGAAGTAAAAGCCGCTGCCGCGCCGGTAACTGGCCCGCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAGGTTCTGACAAACTGCTGCGCCTGACGCTGGATCTCGGCGGTGAAAAACGCAATGTCTTCTCCGGTATTCGTTCTGCTTACCCGGATCCGCAGGCACTGATTGGTCGTCACACCATTATGGTGGCTAACCTGGCACCACGTAAAATGCGCTTCGGTATCTCTGAAGGCATGGTGATGGCTGCCGGTCCTGGCGGGAAAGATATTTTCCTGCTAAGCCCGGATGCCGGTGCTAAACCGGGTCATCAGGTGAAATAA", 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"protein_translation_length": 677, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4499" - ], - [ - "gene_synonym", - "ECK2108" - ], - [ - "gene_synonym", - "yehF" - ], - [ - "gene_synonym", - "yehG" - ], - [ - "gene_synonym", - "sosF" - ], - [ - "gene_synonym", - "dinO" - ], - [ - "gene_synonym", - "yehH" - ], - [ - "gene_synonym", - "JW5915" - ], - [ - "gene_synonym", - "GeneID:2847726" - ], - [ - "gene_synonym", - "ASAP:ABE-0006999" - ], - [ - "gene_synonym", - "JW5916" - ], - [ - "gene_synonym", - "ASAP:ABE-0006997" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33345" - ], - [ - "gene_synonym", - "ASAP:ABE-0285100" - ], - [ - "gene_synonym", - "ASAP:ABE-0007001" - ], - [ - "gene_synonym", - "EcoGene:EG11992" - ], - [ - "gene_synonym", - "molR" - ], - [ - "gene_synonym", - "JW2102" - ] - ], - "dna_sequence": "ATGAGACACTTTATCTATCAGGACGAAAAATCACATAAATTCAGGGCAGTTGAGCAACAGGGAAACGAGTTGCATATCAGTTGGGGAAAAGTTGGCACCAAAGGGCAAAGCCAGATAAAAAGTTTTTCAGATGCTGCGGCAGCGGCAAAAGCGGAGCTTAAGCTGATTGCGGAGAAGGTGAAGAAGGGGTATGTGGAGCAAGCGAAGGATAATTCTTTGCAACCTTCCCAAACGGTAACGGGCTCTCTCAAGGTAGCGGACTTATCCACCATTATTCAGGAACAACCCTCTTTCGTAGCAGAAACCCGTGCGCCTGACAAAAATACAGATGCTGTTTTACCGTGGCTGGCGAAAGATATTGCTGTCGTTTTTCCGCCCGAAGTTGTACACACCACGTTAAGTCATCGCCGCTTTCCCGGAGTTCCTGTTCAGCAAGCAGACAAATTGCCCCAATTACGTCGCTTAGCCTGTAGTGTGTCGCAACGGGATAATAAAACAGCCACATTTGACTTCAGCGCCTGTTCTTTAGAATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTGGAGCAATATTCCAGATTTGAATGACGCCTACGTAAACATTTATCACTGACGGAAGAGTCTCTCTGGCAAAAATGTGCACAAAAACTTATTGCCGCAATTCCACATATTCCAGAATGGCGGCAACCATTAATTGCTTTGTTATTACCCGAAAAACCAGAAATTGCACATGAAATTGCCCAGCGTCTACTGGGGCAAAAAAAATTACCCTCGCTTGAGTGGTTAAAAATAGTGGCGACTGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGTATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATCCGTTCGCATTGACACTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCTAATGACAATGCTTATCTCACAACCAGCACTGGCAGAACAGGTCATTCCCTGGCTCTCGACACCCGCAGTTGCCGTACTGAAATCATGCCAGCAACAACTGACACAGCCCTCAAACCATGCCAGCGCCGATCTACTGCCAGCCGTAGTAGTCTCCCCTCCCTGGCTTTCGAAAAAGAAAAAATCGCCGATTCCGGTGCTGGATTTAGCGCCATTAGGCATTGAGCCAATCTGTTATCTGACAGAAGAAATCAGTAATCAACTTTTGGCGAAATATATCTGGTATTCAAAACACATCACGGTTAGCCATGAAGAAAGTACTACCAACCTGTTGGCAAGGATGGGTTTTCAACGACGGATCGCTGGTACATATATTAAAGCTCCCGAAGCGGTAGTTGAGGCATGGCTAAATGAAGATTATTCAACCTTACTAAGTGAATTTAAGGTGTTTCATTCACCTACCGGGCATTATTGGCAGTTGGGGATTTTGACAACATTGCCGCTGGAGAAAGCAGTAAAAGCATGGAATGCCCTTACCCTATCTCCACATACCGATACCGAATACTCCATGTTACATTTTGGACTCAAAGGGTTACCTGGGTTAGTAAACTCACTTGCACGCTATCCACAAGAAGCCTTGCCCATCACGAATTACTTCGCAGCGAGTGAGCTGGCTCCTGCCGTCGCCCGTGCCTTCAACAAACTGAAAACGCTACGCGAAAACGCCCGTAGCTGGCTGTTGAAATACCCGGAACATGCCCTTACCGGCCTGCTGCCTGCGGCGCTCGGCAAAGCCGGTGAAGCACAGGATAACGCCCGCGCTGCCTTGCGTATGCTTACCGAAAACGGTCATCAGCCATTACTGCAAGAAATCGCCCGACGTTATAACCAGCCGGAAGTAACCGATGCGGTGAACGCTCTGCTTGCGCTCGATCCCTTAGATAATCACCCGACAAAAATCCCCACTCTTCCGGCCTTTTATCAGCCATCGCTCTGGACGCGCCCGGTATTAAAAGCAAATGCCCAATCACTGCCAGATAGCGCCCTCCTCCACCTCGGTGAAATGCTCCGCTTCCCTCAGGAAGAGGCTCTGTATCCGGGATTATTGCAGGTGAAAGACGTCTGTTCCGCCGACTCACTGGCGGGATTTGCCTGGGATCTGTTTACCGCCTGGCAGACCGCTGGCGCGCCGTCGAAAGAGAGTTGGGCGTTCACTGCGTTAGGCGTTCTCGGTAACGATGACACCGCCCGCAAACTGACGCCATTAATACGCGCCTGGCCTGGTGAATCCCAGCATAAACGCGCCACCGTTGGGTTGGATATTCTCGCTGCTATCGGTAGTGATATCGCCCTTATGCAGCTTAACGGCATCGCCCAGAAACTGAAATTCAAAGCATTACAGGAGCGGGCAAAAGAAAAAATTGCCGACATTGCCGAGAGCCGCGAACTCACGGTGGCGGAGCTTGAAGATCGGTTAGCACCGGATCTCGGTCTGGATGATAACGGTTCGCTGCTGCTGGATTTTGGCCCACGGCAGTTCACCGTCAGCTTTGATGAAACCTTAAAACCGTTTGTGCGTGATGTTTCCGGCAGCCGCCTGAAAGACCTGCCCAAACCGAACAAAAGCGATGATGAAACGCGGGCGAACGATGCGGTTAACCGCTACAAATTGCTGAAAAAAGATGCGCGTACCATCGCCGCCCAGCAGGTAGCAAGGCTGGAATCCGCCATGTGCCTGCGCCGCCGCTGGTCGCTGGAAAACTTCCAGCTCTTCCTGGTTGAGCATCCGCTGGTTCGTCACTTAACCCGCCGTCTGATTTGGGGCGTTTATAGCGCCGAAAACCAGCTACTGGCTTGCTTTCGCGTAGCAGAAGATAACAGCTCCAGCACCGCTGACGATGATCTTTTCACCCTGCCGGAAGGCGATATCTCTATCGGCACTCCTCACGTTCTGGAAATATCACCAACGGATGCTGCCGCCTTTGGTCAGCTTTTTGCCGACTACGAACTGCTACCACCGTTCCGCCAGCTCGACCGTAACAGCTACGCCCTGACAGAAGCCGAGCGCAATGCCAGTGAACTGACCCGCTGGGCAGGCAGAAAATGCCCGAGTGGTCGGGTCATGGGGCTGGCGAATAAAGGCTGGATAAAGGGCGAACCACAGGATGGAGGCTGGATCGGATGGATGATCAAACCTTTGGGTCGCTGGTCGTTAATCATGGAAATCGATGAAGGCTTTGCGGTAGGCATGTCGCCAGCCGAACTCAGCGCTGAGCAGCTCTTAAGCAAGCTGTGGCTATGGGAAGGCAAAGCAGAAAGATATGGCTGGGGGAGTAATTCAACACAGGAAGCGCAGTTCTCCGTAATCGATGCCATCACCGCCAGCGAGCTAATTAACGATATTGAAGCCCTGTTTGAATAA", - "dna_sequence_length": 3795, - "id": "CDS_2100", - "location": [ - [ - "NC_000913", - 2196474, - "+", - 2847 - ], - [ - "NC_000913", - 2199322, - "+", - 948 - ] - ], - "md5": "b7474e409cf8018678d216e224e0d553", - "parent_gene": "", - "protein_md5": "c09be9a8946b9e872bab2cda5aa031db", - "protein_translation": "MRHFIYQDEKSHKFRAVEQQGNELHISWGKVGTKGQSQIKSFSDAAAAAKAELKLIAEKVKKGYVEQAKDNSLQPSQTVTGSLKVADLSTIIQEQPSFVAETRAPDKNTDAVLPWLAKDIAVVFPPEVVHTTLSHRRFPGVPVQQADKLPQLRRLACSVSQRDNKTATFDFSACSLEWQNTVAQAISQIDGLKTTQLPSPVMAVLTALEMKCTRYKVREDVMDQIVQEGGLEYATDVIIHLQQIDIEWDYANNVIIILPSGIAPSYLEQYSRFE", - "protein_translation_length": 274, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2109" - ], - [ - "gene_synonym", - "NP_416621.1" - ], - [ - "gene_synonym", - "EcoGene:EG11995" - ], - [ - "gene_synonym", - "yehI" - ], - [ - "gene_synonym", - "GI:16130056" - ], - [ - "gene_synonym", - "GeneID:946649" - ], - [ - "gene_synonym", - "JW2105" - ], - [ - "gene_synonym", - "ASAP:ABE-0007003" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33346" - ], - [ - "gene_synonym", - "b2118" - ] - ], - "dna_sequence": "ATGGACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAAGAGGGGCTGGAATATGCGACTGAGGTGGTGATTGCACGCCAGTTTATTGCGCGGTGTTATGAGAGTGATCCTCTGGTAGTGACATTGCAGTATCAGGACGAGGATTATGGCTATGGTTATCGCTCAGAAACCTATAACGAATTCGATCTCCGACTGCGTAAGCATCTCTCTCTGGCAGAGGAAAGCTGCTGGCAGCGTTGCGCCGACAAACTCATTGCCGCACTACCAGGAATAAACAAAGTTCGCCGCCCTTTTATTGCGCTGATCCTCCCGGAAAAACCAGAAATAGCCAATGAGTTGGTAGGCCTTGAATGCCCGCGAACTCATTTTCATTCTAAGGAGTGGTTAAAAGTTGTTGCTAATGACCCCACAGCGGTGAGAAAACTCGAACACTACTGGAGCCAGGATATATTTAGCGATCGAGAAGCCAGCTACATGTCGCATGAAAACCACTTCGGCTACGCGGCCTGCGCCGCCCTTTTGCGCGAACAAGGACTGGCAGCCATTCCGCGCCTCGCGATGTATGCCCATAAAGAAGATTGCGGCAGTCTGCTGGTACAAATTAACCATCCGCAAGTCATCCGCACCTTGCTACTGGTGGCTGATAAAAACAAACCCAGCCTGCAACGTGTAGCTAAATACCATAAAAACTTCCCCCATGCGACGCTCGCCGCACTGGCAGAACTGCTGGCGTTAACAGAACCACCAGCCCGCCCTGGTTATCCAATCATCGAAGACAAAAAGCTGCCTGCACAGCAAAAAGCACGCGATGAATACTGGCGTACGCTGTTACAAACGCTGATGGCATCGCAGCCACAACTGGCAGCAGAAGTGATGCCGTGGTTAAGTACTCAACCCCAGTCAGTGCTGAAGAGTTATTTATCGGCACCGCCCAAACCGGTTATTGATGGCACCGATAACAGCAATCTGCCAGAAATCCTCGTTTCACCACCGTGGCGTAGTAAGAAAAAAATGACAGCTCCACGTCTTGATTTGGCACCGCTCGAATTAACTCCGCAAGTTTACTGGCAACCAGGCGAACAAGAGAGGCTTGCCGCCACTGAGCCTGCCCGTTATTTCAGCACGGAATCTCTTGCGCAACGCATGGAACAAAAAAGTGGACGAGTTGTATTACAGGAACTGGGTTTTGGGGATGATGTATGGCTGTTTCTGAATTATATACTCCCCGGAAAACTGGATGCTGCACGCAATTCACTCTTTGTTCAGTGGCATTACTACCAGGGGCGGGTTGAAGAGATCCTGAATGGCTGGAACTCCCCGGAAGCACAATTAGCAGAACAGGCGCTCCGCAGCGGTCACATAGAAGCGTTAATTAACATATGGGAAAATGACAACTACTCACATTATCGTCCGGAAAAGAGTGTCTGGAACCTGTATTTATTGGCACAGTTGCCGCGTGAGATGGCTTTGACCTTCTGGCTGCGTATCAATGAGAAAAAGCATCTGTTCGCGGGTGAGGACTATTTTCTCAGTATCCTCGGATTGGATGCGCTACCAGGTCTGCTGTTGGCTTTTTCACATCGTCCAAAAGAAACATTTCCGTTAATTTTAAATTTTGGCGCAACAGAACTGGCGCTGCCTGTTGCCCACGTCTGGCGACGTTTCGCGGCGCAGCGTGATCTGGCTCGCCAGTGGATTTTACAATGGCCGGAACATACGGCTAGTGCACTTATCCCTCTTGTCTTTACCAAACCCAGCGATAATAGCGAAGCCGCATTACTTGCCCTGCGTTTACTGTACGAACAGGGACATGGCGAATTGCTACAAACCGTGGCAAACCGCTGGCAGCGTACAGATGTATGGTCTGCCCTGGAGCAGTTGCTTAAACAGGGTCCAATGGACATTTACCCGGCACGCATTCCAAAAGCCCCTGATTTCTGGCATCCGCAAATGTGGTCCAGGCCGCGCCTTATCACTAATAATCAAACTGTTACCAATGACGCTCTGGAAATTATCGGCGAAATGCTGCGCTTTACCCAGGGGGGACGTTTTTATAGCGGGCTGGAACAACTGAAAACGTTCTGCCAGCCACAAACGCTGGCAGCTTTTGCCTGGGATCTCTTCACTGCGTGGCAACAAGCTGGTGCCCCCGCAAAAGACAACTGGGCATTTCTGGCGTTAAGTCTCTTTGGTGACGAAAGCACGGCACGGGATCTGACGACACAGATCCTCGCCTGGCCACAAGAAGGCAAATCTGCCCGTGCTGTCAGCGGCCTGAACATCCTTACCCTGATGAATAATGATATGGCGCTGATACAGCTGCATCATATATCGCAACGGGCTAAATCCCGCCCCTTACGTGATAACGCGGCGGAATTTCTTCAGGTGGTCGCAGAAAATCGCGGGCTAAGCCAGGAAGAGCTAGCGGACAGATTAGTCCCAACCCTGGGCCTTGATGATCCGCAGGCGTTGAGTTTTGATTTTGGTCCCCGGCAGTTTACCGTTCGCTTCGATGAAAATCTCAACCCGGTTATCTTTGATCAGCAAAACGTTCGCCAGAAAAGCGTTCCCCGTTTGCGCGCCGATGACGATCAACTGAAAGCGCCCGAGGCACTGGCCCGACTAAAAGGGCTAAAAAAAGATGCTACTCAGGTGAGCAAAAACCTGCTCCCGCGTCTTGAAACGGCCCTACGTACCACCCGACGCTGGTCGCTGGCAGATTTTCATTCTCTGTTTGTTAATCATCCCTTTACCCGTCTGGTTACCCAGCGATTAATATGGGGGGTTTATCCGGCAAATGAACCGCGTTGTTTACTCAAAGCCTTTCGTGTGGCCGCAGAGGGGGAGTTCTGCAATGCGCAAGATGAGCCAATTGACCTGCCTGCGGACGCTCTGATTGGCATTGCCCACCCGTTAGAAATGACAGCAGAAATGCGCAGTGAATTTGCACAGCTTTTTGCCGATTACGAAATTATGCCGCCTTTTCGCCAGTTGTCGCGCCGCACGGTGCTGCTCACACCTGACGAGTCAACCAGTAACAGCCTGACTCGCTGGGAAGGTAAATCCGCTACCGTTGGGCAACTTATGGGAATGCGATACAAAGGCTGGGAGTCAGGCTATGAGGACGCATTTGTCTATAACCTGGGTGAGTACCGGCTGGTCCTTAAGTTTTCACCCGGTTTTAACCACTACAATGTTGATAGCAAAGCGCTAATGAGCTTCCGTTCTCTTCGAGTGTACCGTGACAATAAATCCGTCACTTTTGCCGAACTTGATGTGTTTGATTTGAGTGAGGCGTTAAGCGCACCTGACGTCATTTTCCATTAA", 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"MDKELPWLADNAQLELKYKKGKTPLSHRRWPGEPVSVITGSLIQTLGDELLQKAEKKKNIVWRYENFSLEWQSAITQAINLIGEHKPSIPARTMAALACIAQNDSQQLLDEIVQQEGLEYATEVVIARQFIARCYESDPLVVTLQYQDEDYGYGYRSETYNEFDLRLRKHLSLAEESCWQRCADKLIAALPGINKVRRPFIALILPEKPEIANELVGLECPRTHFHSKEWLKVVANDPTAVRKLEHYWSQDIFSDREASYMSHENHFGYAACAALLREQGLAAIPRLAMYAHKEDCGSLLVQINHPQVIRTLLLVADKNKPSLQRVAKYHKNFPHATLAALAELLALTEPPARPGYPIIEDKKLPAQQKARDEYWRTLLQTLMASQPQLAAEVMPWLSTQPQSVLKSYLSAPPKPVIDGTDNSNLPEILVSPPWRSKKKMTAPRLDLAPLELTPQVYWQPGEQERLAATEPARYFSTESLAQRMEQKSGRVVLQELGFGDDVWLFLNYILPGKLDAARNSLFVQWHYYQGRVEEILNGWNSPEAQLAEQALRSGHIEALINIWENDNYSHYRPEKSVWNLYLLAQLPREMALTFWLRINEKKHLFAGEDYFLSILGLDALPGLLLAFSHRPKETFPLILNFGATELALPVAHVWRRFAAQRDLARQWILQWPEHTASALIPLVFTKPSDNSEAALLALRLLYEQGHGELLQTVANRWQRTDVWSALEQLLKQGPMDIYPARIPKAPDFWHPQMWSRPRLITNNQTVTNDALEIIGEMLRFTQGGRFYSGLEQLKTFCQPQTLAAFAWDLFTAWQQAGAPAKDNWAFLALSLFGDESTARDLTTQILAWPQEGKSARAVSGLNILTLMNNDMALIQLHHISQRAKSRPLRDNAAEFLQVVAENRGLSQEELADRLVPTLGLDDPQALSFDFGPRQFTVRFDENLNPVIFDQQNVRQKSVPRLRADDDQLKAPEALARLKGLKKDATQVSKNLLPRLETALRTTRRWSLADFHSLFVNHPFTRLVTQRLIWGVYPANEPRCLLKAFRVAAEGEFCNAQDEPIDLPADALIGIAHPLEMTAEMRSEFAQLFADYEIMPPFRQLSRRTVLLTPDESTSNSLTRWEGKSATVGQLMGMRYKGWESGYEDAFVYNLGEYRLVLKFSPGFNHYNVDSKALMSFRSLRVYRDNKSVTFAELDVFDLSEALSAPDVIFH", - "protein_translation_length": 1210, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4541" - ], - [ - "gene_synonym", - "ASAP:ABE-0285062" - ], - [ - "gene_synonym", - "ECK2110" - ], - [ - "gene_synonym", - "yehK" - ], - [ - "gene_synonym", - "EcoGene:EG11997" - ], - [ - "gene_synonym", - "GI:94541136" - ], - [ - "gene_synonym", - "GeneID:4056035" - ], - [ - "gene_synonym", - "YP_588459.1" - ], - [ - "gene_synonym", - "JW2106" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33347" - ] - ], - "dna_sequence": "ATGATCGTGCAAAAAGAGCTGGTTGCTATTTACGATTATGAGGTCCCTGTACCTGAAGATCCGTTTTCCTTCAGACTTGAGATCCATAAATGCTCTGAATTATTTACAGGTTCCGTCTATCGACTGGAGCGATTCCGGCTACGTCCAACATTTCATCAACGTGATCGAGAAGATGCTGACCCGCTAATAAATGATGCGTTGATTTATATAAGAGATGAGTGTATTGATGAGCGGAAATTACGAGGTGAATCACCTGAAACTGTAATAGCAATTTTTAATCGTGAACTACAGAATATATTCAACCAAGAAATAGAATAA", - "dna_sequence_length": 318, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2102", - "location": [ - [ - "NC_000913", - 2203972, - "+", - 318 - ] - ], - "md5": "5a46d1b4df1eeeb900a6592c28f8ee46", - "parent_gene": "", - "protein_md5": "f20a454183135a492393ec3dfe4801da", - "protein_translation": "MIVQKELVAIYDYEVPVPEDPFSFRLEIHKCSELFTGSVYRLERFRLRPTFHQRDREDADPLINDALIYIRDECIDERKLRGESPETVIAIFNRELQNIFNQEIE", - "protein_translation_length": 105, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5349" - ], - [ - "gene_synonym", - "EcoGene:EG11998" - ], - [ - "gene_synonym", - "ECK2111" - ], - [ - "gene_synonym", - "yehL" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33348" - ], - [ - "gene_synonym", - "NP_416623.2" - ], - [ - "gene_synonym", - "GI:90111389" - ], - [ - "gene_synonym", - "GeneID:946656" - ], - [ - "gene_synonym", - "b2119" - ], - [ - "gene_synonym", - "ASAP:ABE-0007006" - ] - ], - "dna_sequence": "ATGTCACCGCAGAATAATCATCTGCAGCGTCCGCCTGCTGCTGTGTTATACGCCGATGAACTGGCAAAATTAAAACAAAATGATAACGCACCTTGCCCGCCCGGTTGGCAGTTAAGTTTGCCTGCGGCCCGTGCTTTTATCCTTGGCGACGAAGCGCAAAATATCAGCCGTAAAGTGGTGATTAGCCCCTCCGCTGTCGAACGTATGTTAGTCACTCTTGCTACCGGCCGCGGTTTGATGTTGGTGGGGGAACCGGGTACCGCAAAATCTCTTCTTTCTGAATTACTGGCAACCGCTATTAGCGGCGATGCCGGGTTAACCATCCAGGGCGGGGCATCTACCACCGAAGATCAAATCAAGTATGGCTGGAACTACGCCCTGCTTATCAATCATGGTCCGTCAACGGAAGCGCTGGTCCCTGCCCCGCTTTATCAGGGAATGCGCGACGGCAAAATCGTCCGTTTCGAAGAGATAACGCGTACACCGCTGGAAGTGCAGGACTGTCTGTTAGGTATGCTTTCTGACAGGGTGATGACGGGGCCGGAACTCACTGGTGAAGCCAGTCAGCTCTATGCGCGAGAAGGCTTTAATATTATTGCCACTGCCAATACCCGCGATCGCGGCGTCAATGAAATGAGTGCTGCGCTAAAGCGTCGCTTCGATTTTGAAACGGTTTTTCCGATTATGGATTTCGCCCAGGAGTTGGAACTGGTCGCCAGTGCTTCGGCGCGTTTGCTGGCCCATAGCGGTATTCCGCATAAAGTGCCTGACGCGGTACTGGAATTACTGGTCCGCACCTTCCGCGATCTGCGTGCCAACGGCGAAAAGAAAACGTCAATGGATACACTGACAGCGATTATGTCCACCGCTGAAGCCGTGAACGTGGCCCATGCTGTGGGCGTCCGCGCCTGGTTTTTAGCGAATCGCGCGGGGGAGCCTGCCGACCTGGTGGAATGTATTGCCGGAACCATCGTCAAAGATAACGAAGAAGATCGCGCGCGTCTGCGCCGTTACTTCGAACAGCGTGTCGCCACACATAAAGAAGCTCACTGGCAGGCTTATTATCAAGCCCGCCACCGCCTGCCGTGA", - "dna_sequence_length": 1089, - "functions": [ - "putative hexameric AAA+ MoxR family ATPase" - ], - "id": "CDS_2103", - "location": [ - [ - "NC_000913", - 2204596, - "+", - 1089 - ] - ], - "md5": "60ce44118dea7f6ef25a7228f0bd90c7", - "parent_gene": "", - "protein_md5": "43c2db5ea6776659302ee1bfbc263395", - "protein_translation": "MSPQNNHLQRPPAAVLYADELAKLKQNDNAPCPPGWQLSLPAARAFILGDEAQNISRKVVISPSAVERMLVTLATGRGLMLVGEPGTAKSLLSELLATAISGDAGLTIQGGASTTEDQIKYGWNYALLINHGPSTEALVPAPLYQGMRDGKIVRFEEITRTPLEVQDCLLGMLSDRVMTGPELTGEASQLYAREGFNIIATANTRDRGVNEMSAALKRRFDFETVFPIMDFAQELELVASASARLLAHSGIPHKVPDAVLELLVRTFRDLRANGEKKTSMDTLTAIMSTAEAVNVAHAVGVRAWFLANRAGEPADLVECIAGTIVKDNEEDRARLRRYFEQRVATHKEAHWQAYYQARHRLP", - "protein_translation_length": 362, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130058" - ], - [ - "gene_synonym", - "EcoGene:EG11999" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33349" - ], - [ - "gene_synonym", - "b2120" - ], - [ - "gene_synonym", - "yehN" - ], - [ - "gene_synonym", - "yehO" - ], - [ - "gene_synonym", - "yehM" - ], - [ - "gene_synonym", - "ASAP:ABE-0007008" - ], - [ - "gene_synonym", - "JW2108" - ], - [ - "gene_synonym", - "NP_416624.1" - ], - [ - "gene_synonym", - "ECK2112" - ], - [ - "gene_synonym", - "GeneID:946651" - ] - ], - "dna_sequence": "ATGAGCGAGCCGTTAATTGTCGGCATCCGGCATCATAGTCCGGCCTGCGCCCGGCTGGTGAAATCGTTAATCGAAAGCCAGCGGCCACGATACGTGTTGATTGAAGGCCCGGCTGATTTTAATGACCGGGTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGTGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGATTTGCCTTGCTGGGCGCAGAGTGAAGAAGAGGACGATTCGCCTGATACGCAAGATGAAAGCCAGGCCTTACTGCTGCGTGCCACCCGCATGGATAACAGCGATACCCTGTGGGATCACTTGTTCGAAGATGAAAGCCAGCAAACTGCATTACCCTCTGCGCTGGCGCACTATTTTGCCCAACTGCGGGGCGACGCCTCCGGCGATGCGCTCAATCGTCAGCGCGAAGCCTTTATGGCCCGCTGGATTGGATGGGCGATGCAGCAAAATAATGGCGACGTGTTAGTTGTCTGCGGTGGCTGGCACGCTCCGGCACTGGCAAAGATGTGGCGCGAATGCCCTCAGAAAATTAACAAGCCAGAATTGCCCTCGCTGGCAGATGCCGTTACAGGTTGTTATCTCACACCCTACAGTGAAAAGCGCCTTGATGTGCTGGCAGGATACCTTTCAGGAATGCCTGCCCCGGTATGGCAAAACTGGTGCTGGCAGTGGGGCTTGCAGAAGGCCGGTGAACAACTGCTAAAAACTATCCTTACCCGTTTGCGCCAGCACAAATTGCCCGCTTCTACCGCGGATATGGCTGCCGCTCATCTGCATGCGATGGCGCTGGCACAGTTGCGCGGTCATACACTACCGTTACGCACTGACTGGCTGGATGCCATAGCAGGCTCGCTGATTAAAGAAGCCCTGAACGCGCCGTTGCCGTGGAGCTATCGCGGCGTTATTCATCCCGATACCGATCCGATTCTGCTAACGTTGATAGACACATTAGCGGGTGACGGATTCGGTAAACTTGCCCCTTCTACGCCACAACCGCCTCTGCCAAAAGATGTCACCTGCGAACTGGAACGTACCGCAATCTCCCTTCCGGCGGAGCTTACCTTAAATCGCTTTACCCCCGATGGGCTGGCGCAAAGTCAGGTGTTACATCGGCTGGCAATACTGGAGATCCCTGGGATTGTACGCCAGCAGGGAAGTACACTGACACTTGCAGGCAACGGTGAAGAACGCTGGAAATTAACCCGCCCGCTTAGCCAGCATGCGGCATTGATTGAGGCCGCCTGTTTTGGTGCCACACTCCAGGAAGCCGCACGCAATAAATTAGAAGCCGATATGCTGGACGCGGGCGGAATCGGCAGTATCACCACATGTCTTAGCCAGGCGGCGTTAGCGGGTCTGGCGTCCTTCAGTCAACAATTACTGGAGCAACTCACACTATTAATCGCCCAGGAAAATCAATTTGCCGAAATGGGCCAGGCGCTGGAAGTGCTTTATGCCTTATGGCGGCTGGATGAAATTAGCGGTATGCAAGGCGCGCAGATATTACAAACGACGTTATGCGCGACTATCGATCGCACGCTGTGGCTGTGTGAATCTAACGGCAGACCGGATGAAAAGGAGTTTCACGCTCACCTGCATAGCTGGCAAGCGCTTTGCCATATTCTGCGCGATCTACATAGCGGCGTTAATTTACCCGGCGTTTCTCTTTCTGCGGCGGTAGCCTTACTGGAGCGACGCAGTCAGGCAATTCATGCCCCGGCGCTGGATCGCGGCGCGGCTCTTGGCGCACTAATGCGTCTGGAACATCCCAACGCCAGTGCCGAAGCGGCGCTGACGATGCTGGCGCAGTTATCCCCGGCACAATCTGGTGAGGCGCTGCACGGTTTGCTGGCGCTGGCCCGCCATCAACTGGCCTGTCAGCCGGCATTTATCGCCGGTTTCAGCAGTCATTTAAATCAACTGAGTGAAGCCGATTTTATTAACGCCCTGCCCGATTTACGCGCGGCGATGGCCTGGCTACCACCACGAGAACGCGGGACGCTGGCGCATCAGGTGCTTGAGCATTATCAACTGGCGCAACTTCCCGTTTCGGCGCTGCAAATGCCGTTGCATTGTCCACCACAGGCCATTGCACATCATCAACAACTCGAACAGCAGGCACTGGCATCGCTGCAAAACTGGGGAGTTTTCCATGTCTGA", - "dna_sequence_length": 2280, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2104", - "location": [ - [ - "NC_000913", - 2205695, - "+", - 2280 - ] - ], - "md5": "71db0868aaedaccbbfaaef1e4b0c3103", - "parent_gene": "", - "protein_md5": "a829b5075216c4a51e52827a7d9c601f", - "protein_translation": "MSEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRVDELFLAHQLPVAIYSYCQYQDGAAPGRGAWTPFAEFSPEWQALQAARRIQAQTYFIDLPCWAQSEEEDDSPDTQDESQALLLRATRMDNSDTLWDHLFEDESQQTALPSALAHYFAQLRGDASGDALNRQREAFMARWIGWAMQQNNGDVLVVCGGWHAPALAKMWRECPQKINKPELPSLADAVTGCYLTPYSEKRLDVLAGYLSGMPAPVWQNWCWQWGLQKAGEQLLKTILTRLRQHKLPASTADMAAAHLHAMALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPLPWSYRGVIHPDTDPILLTLIDTLAGDGFGKLAPSTPQPPLPKDVTCELERTAISLPAELTLNRFTPDGLAQSQVLHRLAILEIPGIVRQQGSTLTLAGNGEERWKLTRPLSQHAALIEAACFGATLQEAARNKLEADMLDAGGIGSITTCLSQAALAGLASFSQQLLEQLTLLIAQENQFAEMGQALEVLYALWRLDEISGMQGAQILQTTLCATIDRTLWLCESNGRPDEKEFHAHLHSWQALCHILRDLHSGVNLPGVSLSAAVALLERRSQAIHAPALDRGAALGALMRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALARHQLACQPAFIAGFSSHLNQLSEADFINALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQLPVSALQMPLHCPPQAIAHHQQLEQQALASLQNWGVFHV", - "protein_translation_length": 759, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12002" - ], - [ - "gene_synonym", - "GI:16130059" - ], - [ - "gene_synonym", - "b2121" - ], - [ - "gene_synonym", - "NP_416625.1" - ], - [ - "gene_synonym", - "ECK2113" - ], - [ - "gene_synonym", - "JW5350" - ], - [ - "gene_synonym", - "yehP" - ], - [ - "gene_synonym", - "ASAP:ABE-0007013" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33352" - ], - [ - "gene_synonym", - "GeneID:946652" - ] - ], - "dna_sequence": "ATGTCTGAACTGAACGATCTTCTGACCACCCGTGAGCTACAACGCTGGCGATTAATTCTTGGCGAAGCGGCAGAAACGACGCTTTGTGGGCTGGATGACAACGCCCGGCAGATAGACCACGCGCTGGAGTGGCTGTATGGGCGCGATCCTGAACGGCTCCAGCGTGGTGAACGTTCCGGTGGATTAGGTGGCTCAAATCTCACCACCCCTGAGTGGATCAACAGTATTCACACGCTGTTTCCGCAGCAGGTGATTGAGCGGCTGGAAAGCGATGCCGTGCTGCGCTACGGCATTGAAGATGTGGTGACGAATCTCGACGTGCTGGAACGTATGCAGCCTTCTGAAAGCCTGCTACGCGCTGTTTTGCACACCAAACATCTGATGAACCCCGAAGTACTGGCTGCCGCCCGCCGGATAGTGTGCCAGGTTGTTGAAGAAATTATGGCTCGACTGGCAAAGGAAGTTCGTCAGGCTTTTTCTGGTGTCCGCGATCGCCGTCGCCGTTCATTTATTCCACTGGCGCGAAACTTTGATTTCAAAAGTACTCTGCGCGCCAACCTGCAACACTGGCACCCGCAACACGGCAAGTTGTATATCGAATCCCCCCGCTTTAACAGCCGCATTAAACGCCAAAGCGAACAATGGCAACTGGTCTTACTGGTTGATCAAAGCGGATCGATGGTCGATTCGGTGATCCACTCTGCGGTGATGGCGGCCTGTTTGTGGCAGTTACCCGGCATTCGTACCCATCTGGTGGCGTTTGACACAAGCGTCGTTGATCTCACGGCAGACGTTGCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGTGTGTCCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAGCACCGCAACACCTTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGA", - "dna_sequence_length": 1137, - "functions": [ - "VMA domain putative YehL ATPase stimulator" - ], - "id": "CDS_2105", - "location": [ - [ - "NC_000913", - 2207967, - "+", - 1137 - ] - ], - "md5": "3dd2fdf9fa7aae0f59951d170adbe813", - "parent_gene": "", - "protein_md5": "1ca4fc5cb1e3d5214fb547c4cc5e2462", - "protein_translation": "MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEWLYGRDPERLQRGERSGGLGGSNLTTPEWINSIHTLFPQQVIERLESDAVLRYGIEDVVTNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARRIVCQVVEEIMARLAKEVRQAFSGVRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLVLLVDQSGSMVDSVIHSAVMAACLWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQLGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGLAALDSTATPCYDRDTAQALVNVGAQIAAMTPGELASWLAENLQS", - "protein_translation_length": 378, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12003" - ], - [ - "gene_synonym", - "GeneID:946654" - ], - [ - "gene_synonym", - "b2122" - ], - [ - "gene_synonym", - "ECK2114" - ], - [ - "gene_synonym", - "ASAP:ABE-0007015" - ], - [ - "gene_synonym", - "yehQ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33353" - ], - [ - "gene_synonym", - "JW2110" - ] - ], - "dna_sequence": "ATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTGTTAAGCGCAGTCTTAAGGAACTGGAAAATGGCAACGTCCCGGAGATCAGCCATGAGAACGACGCTTTAATCGCCACCTTCAGTGACGGTGTCCGTACCCAGCTGGCGAACGGCCAGGCACTGAAAGAGGCTCAGTGCAGTTGCGGGGCCAACGGTATGTGCCGTCATCGCGTGATGCTGGTGTTAAGTTATCAACGACTTTGTGCCACCACTCAGTCTACGGAAAAAGAAGAAGAGTGGGATCCGGCAATCTGGCTGGAAGAACTGGCTACCCTTCCCGATGCTACCCGCAAACGCGCACAGGCGCTGGTCGCTAAAGGCATCACCATTGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACGTCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCGCTGGGTGAGTGAATCGCTACGGCAACTGCGCGCCAGCGTTGATGCCTTCCACGCCCGCGCCAGCCACTATAATGCCGGAGAATGCTTACATCAGCTTGCGGCATTAAACAGTCGATTAAATTGCGCACAAGAGATGGCCCGGCGCGACAGTATTGGTGAAGTTCCTCCTGTGCCGTGGCGCACGGTCGTTGGCTCTGGCATTGCCGGAGAAGCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTACCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCTGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGGCCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATGCGCAGGTCATTAGCGGCGAAGGGGAAGATAATGTGCTGACGTTATCATTACCAGCCTCAGCCAGCGCACCTTATGCCGTTGAACGCATGGCGGCGCTTTTGCAACAAACAGACGACCCCGTGTGTCTGGTTTCTGGCTTTGTCAGTTTTGTTGAAGGGCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGGCGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACGGGTAGAAGCAATGAATAACGGTGTTTTGCTTTGCGAACAATTATTCCCCATGCTTCAGCAACAAGGATGA", - "dna_sequence_length": 2001, - "id": "CDS_2106", - "location": [ - [ - "NC_000913", - 2209100, - "+", - 2001 - ] - ], - "md5": "5abbd2d113412b2314fde187ba8b0167", - "parent_gene": "", - "protein_md5": "9c1df2edfbab25a01c32ee6a773d1c12", - "protein_translation": "MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENDALIATFSDGVRTQLANGQALKEAQCSCGANGMCRHRVMLVLSYQRLCATTQSTEKEEEWDPAIWLEELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLAVQAFVEAKAQQAEFNHLIWQMRSEHVTSSDDPFASEEGNACRQYVQQLSQTLWLGGISQPLIHYEAAFNRALQAAETCNWRWVSESLRQLRASVDAFHARASHYNAGECLHQLAALNSRLNCAQEMARRDSIGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECISLGWDSSRQTLDAQVISGEGEDNVLTLSLPASASAPYAVERMAALLQQTDDPVCLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAETTPVAPLPSASVLPVPSTAHQLLIRCQALLIQLLHNGWRYQEQSAIGQA", - "protein_translation_length": 614, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:949023" - ], - [ - "gene_synonym", - "EcoGene:EG12004" - ], - [ - "gene_synonym", - "b2123" - ], - [ - "gene_synonym", - "ECK2115" - ], - [ - "gene_synonym", - "JW5351" - ], - [ - "gene_synonym", - "yehR" - ], - [ - "gene_synonym", - "ASAP:ABE-0007018" - ], - [ - "gene_synonym", - "NP_416627.2" - ], - [ - "gene_synonym", - "GI:90111391" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33354" - ] - ], - "dna_sequence": "ATGAAGGCTTTCAATAAGCTGTTTTCCCTCGTTGTTGCATCTGTTCTGGTTTTCTCTCTTGCTGGCTGCGGTGACAAAGAAGAATCGAAGAAATTCAGCGCCAATCTGAACGGCACTGAAATTGCCATTACCTATGTCTACAAAGGTGACAAGGTGCTTAAGCAATCTTCTGAAACCAAAATTCAATTTGCCTCCATTGGTGCAACCACCAAAGAAGATGCTGCCAAGACACTTGAGCCGTTAAGCGCCAAATACAAAAACATCGCGGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTCTGCTGAAGATGCCAAAAAAGGTATCACTATGGCGCAAATGGAACTGGTGATGAAAGCCGCTGGTTTTAAAGAAGTGAAATAA", - "dna_sequence_length": 462, - "functions": [ - "lipoprotein, DUF1307 family" - ], - "id": "CDS_2107", - "location": [ - [ - "NC_000913", - 2211225, - "+", - 462 - ] - ], - "md5": "9f96de3d960fcc12d450342b0c31858a", - "parent_gene": "", - "protein_md5": "70e035becaca35b0101d7a06420dd380", - "protein_translation": "MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASIGATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK", - "protein_translation_length": 153, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130062" - ], - [ - "gene_synonym", - "EcoGene:EG12005" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33355" - ], - [ - "gene_synonym", - "ECK2116" - ], - [ - "gene_synonym", - "yehS" - ], - [ - "gene_synonym", - "ASAP:ABE-0007021" - ], - [ - "gene_synonym", - "b2124" - ], - [ - "gene_synonym", - "JW2112" - ], - [ - "gene_synonym", - "GeneID:949026" - ], - [ - "gene_synonym", - "NP_416628.1" - ] - ], - "dna_sequence": "ATGCTAAGTAACGATATTCTGCGCAGCGTGCGCTACATTTTGAAAGCCAATAATAATGACCTGGTGCGTATTCTGGCGCTGGGTAATGTCGAAGCCACCGCGGAACAGATCGCCGTCTGGCTACGTAAAGAAGACGAAGAGGGTTTTCAGCGTTGTCCGGACATTGTTTTGTCGTCATTCCTCAATGGCCTGATTTATGAAAAACGCGGCAAGGATGAGTCTGCTCCGGCACTGGAGCCGGAACGTCGCATTAATAACAACATCGTGCTGAAAAAATTACGCATCGCGTTTTCGCTGAAAACCGATGACATTCTGGCTATCCTCACCGAACAGCAGTTCCGCGTTTCGATGCCGGAAATTACAGCGATGATGCGCGCACCGGATCATAAAAACTTCCGCGAATGCGGCGATCAATTTTTACGTTATTTTCTGCGTGGACTGGCAGCGCGCCAGCATGTGAAAAAAGGCTAA", - "dna_sequence_length": 471, - "functions": [ - "DUF1456 family protein" - ], - "id": "CDS_2108", - "location": [ - [ - "NC_000913", - 2212196, - "-", - 471 - ] - ], - "md5": "779cb539513054fa394d5ceceff9e558", - "parent_gene": "", - "protein_md5": "7e790bdc7dbdf627c044ae7d61b77adf", - "protein_translation": "MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKEDEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTDDILAILTEQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKG", - "protein_translation_length": 156, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12006" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFT5" - ], - [ - "gene_synonym", - "JW5352" - ], - [ - "gene_synonym", - "ECK2117" - ], - [ - "gene_synonym", - "ASAP:ABE-0007023" - ], - [ - "gene_synonym", - "yehT" - ], - [ - "gene_synonym", - "GeneID:949024" - ], - [ - "gene_synonym", - "b2125" - ], - [ - "gene_synonym", - "GI:90111392" - ], - [ - "gene_synonym", - "NP_416629.4" - ] - ], - "dna_sequence": "ATGATTAAAGTCTTAATTGTCGATGATGAACCGTTAGCACGGGAGAACCTGCGTGTATTTTTGCAGGAGCAGAGCGATATTGAAATCGTTGGAGAGTGTTCAAACGCCGTGGAAGGGATCGGCGCGGTGCATAAACTGCGCCCGGATGTGCTGTTTCTCGATATCCAGATGCCGCGCATCAGTGGTCTGGAAATGGTGGGGATGCTTGACCCGGAACATCGCCCGTATATTGTTTTTCTCACTGCGTTTGACGAATACGCAATTAAAGCCTTTGAAGAACATGCCTTTGATTATCTGCTGAAGCCAATTGATGAAGCGCGACTGGAGAAAACGCTGGCGCGATTGCGTCAGGAGCGCAGCAAGCAGGATGTTTCGCTGTTACCGGAAAATCAACAGGCGCTGAAATTTATCCCTTGTACGGGGCATAGTCGGATTTATTTGCTGCAAATGAAAGATGTGGCATTTGTCAGCAGTCGGATGAGCGGTGTCTACGTTACCAGCCACGAAGGGAAAGAGGGCTTTACCGAATTGACATTACGTACCCTGGAAAGTCGTACACCACTACTGCGCTGCCATCGTCAGTATCTGGTTAACCTCGCGCATTTACAGGAGATTCGTCTGGAAGATAACGGCCAGGCCGAGTTGATTTTGCGTAATGGCTTAACCGTGCCGGTCAGCCGCCGTTATCTGAAAAGCTTAAAAGAGGCGATTGGCCTGTAA", - "dna_sequence_length": 720, - "functions": [ - "putative response regulator in two-component system withYehU" - ], - "id": "CDS_2109", - "location": [ - [ - "NC_000913", - 2212962, - "-", - 720 - ] - ], - "md5": "515a48430e170f2e76023854b9c5f83a", - "parent_gene": "", - "protein_md5": "19ff1b5d6bf0dc49e6340de80d654268", - "protein_translation": "MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL", - "protein_translation_length": 239, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2118" - ], - [ - "gene_synonym", - "EcoGene:EG12007" - ], - [ - "gene_synonym", - "GI:16130064" - ], - [ - "gene_synonym", - "b2126" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD14" - ], - [ - "gene_synonym", - "JW5353" - ], - [ - "gene_synonym", - "ASAP:ABE-0007027" - ], - [ - "gene_synonym", - "yehU" - ], - [ - "gene_synonym", - "GeneID:949027" - ], - [ - "gene_synonym", - "NP_416630.1" - ] - ], - "dna_sequence": "ATGTACGATTTTAATCTGGTGTTGCTGCTGCTTCAGCAGATGTGCGTTTTTTTAGTCATTGCATGGTTAATGAGTAAAACGCCATTATTCATACCGTTAATGCAGGTCACGGTTCGTCTGCCGCATAAATTTCTCTGCTACATCGTCTTTTCCATCTTCTGCATCATGGGCACCTGGTTTGGGTTGCACATTGACGATTCTATTGCCAATACCCGTGCGATAGGCGCGGTAATGGGCGGCTTACTCGGCGGTCCGGTCGTCGGTGGGCTGGTTGGGCTGACCGGCGGCTTACATCGATATTCGATGGGGGGCATGACCGCGTTAAGTTGCATGATCTCGACCATCGTTGAAGGATTACTCGGTGGCCTGGTACACAGCATCCTGATCCGCCGCGGGCGCACTGATAAAGTCTTTAACCCCATTACCGCCGGTGCCGTCACGTTCGTCGCTGAAATGGTGCAAATGCTGATCATCCTTGCGATCGCCCGACCTTATGAAGATGCGGTGCGTCTGGTGAGTAATATTGCTGCGCCAATGATGGTCACCAATACCGTCGGCGCGGCGCTGTTTATGCGTATATTGCTCGATAAACGCGCGATGTTTGAAAAATACACTTCGGCTTTTTCTGCCACTGCGCTGAAAGTGGCAGCCTCGACGGAAGGCATTTTGCGCCAGGGGTTTAACGAAGTGAACAGCATGAAAGTGGCTCAGGTGCTGTATCAGGAACTGGATATTGGTGCAGTCGCGATTACCGATCGAGAGAAATTGCTGGCCTTTACCGGAATTGGTGACGACCACCATTTACCCGGCAAACCGATTTCTTCAACTTATACTTTAAAAGCGATTGAAACCGGTGAAGTGGTCTACGCTGATGGCAACGAAGTACCTTACCGTTGCTCTTTGCATCCGCAATGCAAACTGGGGTCGACGCTGGTAATTCCGTTGCGTGGTGAAAATCAGCGGGTGATGGGCACCATCAAATTGTATGAAGCCAAAAACCGTTTATTCAGTTCAATCAACCGCACGTTGGGTGAGGGGATTGCGCAATTGCTTTCGGCGCAGATCCTTGCCGGGCAATATGAGCGGCAAAAAGCGATGCTCACCCAGTCAGAGATCAAACTGCTTCACGCCCAGGTGAATCCCCATTTTTTGTTTAATGCGCTTAACACCATTAAAGCGGTGATCCGCCGCGACAGCGAACAGGCCAGCCAGCTGGTGCAGTATCTTTCCACTTTTTTCCGCAAAAACTTAAAGCGGCCTTCGGAGTTTGTTACTCTCGCCGACGAAATTGAACATGTGAATGCTTATCTGCAAATTGAAAAGGCGCGCTTCCAGTCGCGGTTGCAGGTCAACATTGCTATTCCGCAAGAATTATCCCAGCAGCAATTGCCCGCGTTTACCCTGCAACCGATAGTGGAAAACGCCATTAAACATGGGACATCACAACTGCTGGATACAGGGCGAGTGGCAATCAGCGCCCGACGTGAGGGGCAACATTTGATGCTGGAGATCGAAGACAATGCCGGTTTGTATCAACCGGTAACCAATGCCAGTGGGCTGGGGATGAATCTGGTGGATAAGCGTTTACGTGAACGGTTTGGCGATGACTATGGAATAAGCGTCGCCTGTGAGCCTGATAGTTACACCCGAATAACGTTACGACTACCATGGAGGGACGAGGCATGA", - "dna_sequence_length": 1686, - "functions": [ - "inner membrane putative sensory kinase in two-component system with YehT" - ], - "id": "CDS_2110", - "location": [ - [ - "NC_000913", - 2214644, - "-", - 1686 - ] - ], - "md5": "42125b7f7a5e7bd4d986ee00d8135de7", - "parent_gene": "", - "protein_md5": "42f56e489167f808d0238f10719f137e", - "protein_translation": "MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNAGLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLRLPWRDEA", - "protein_translation_length": 561, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33358" - ], - [ - "gene_synonym", - "ECK2119" - ], - [ - "gene_synonym", - "GI:16130065" - ], - [ - "gene_synonym", - "EcoGene:EG12008" - ], - [ - "gene_synonym", - "b2127" - ], - [ - "gene_synonym", - "NP_416631.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007030" - ], - [ - "gene_synonym", - "yehV" - ], - [ - "gene_synonym", - "GeneID:949029" - ], - [ - "gene_synonym", - "mlrA" - ], - [ - "gene_synonym", - "JW2115" - ] - ], - "dna_sequence": "ATGGCGCTTTACACAATTGGTGAAGTGGCGTTGCTTTGTGATATTAATCCTGTCACGTTACGCGCGTGGCAGAGGCGTTACGGATTGCTGAAACCGCAACGGACAGACGGCGGTCATCGGCTGTTCAACGATGCCGATATTGACCGGATCCGCGAGATCAAACGCTGGATCGACAACGGCGTGCAGGTCAGCAAAGTTAAAATGCTGCTCAGTAATGAAAATGTTGATGTGCAGAACGGCTGGCGCGATCAGCAAGAAACATTACTGACTTACCTGCAAAGCGGCAATCTACATAGCCTGCGAACGTGGATCAAAGAGCGCGGTCAGGATTACCCCGCCCAGACACTCACCACACATCTGTTTATTCCTCTGCGCCGACGGCTTCAGTGCCAACAACCGACTCTCCAGGCGCTGCTGGCGATCCTCGACGGCGTACTGATCAACTACATCGCCATTTGTCTGGCTTCGGCACGTAAAAAACAGGGTAAAGATGCGCTGGTGGTTGGCTGGAATATTCAGGATACCACCCGTCTGTGGCTGGAGGGCTGGATTGCCAGTCAACAAGGATGGCGCATTGATGTCCTCGCCCACTCGCTCAATCAACTACGCCCTGAACTATTCGAAGGCCGTACATTGCTGGTGTGGTGCGGTGAAAATCGAACCTCCGCCCAACAGCAGCAACTCACCAGTTGGCAAGAACAAGGCCATGATATTTTCCCACTCGGCATTTAA", - "dna_sequence_length": 732, - "functions": [ - "transcriptional activator of csgD and csgBA" - ], - "id": "CDS_2111", - "location": [ - [ - "NC_000913", - 2214866, - "+", - 732 - ] - ], - "md5": "0469c9b99d1d1ecb441e730b2994e582", - "parent_gene": "", - "protein_md5": "9c1d67af1aa8f4d75db0d5795bd5a07e", - "protein_translation": "MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNGVQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYPAQTLTTHLFIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARKKQGKDALVVGWNIQDTTRLWLEGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGENRTSAQQQQLTSWQEQGHDIFPLGI", - "protein_translation_length": 243, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4542" - ], - [ - "gene_synonym", - "YP_588460.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0285063" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q2EES6" - ], - [ - "gene_synonym", - "GeneID:1450279" - ], - [ - "gene_synonym", - "yohO" - ], - [ - "gene_synonym", - "JW5354" - ], - [ - "gene_synonym", - "ECK2120" - ], - [ - "gene_synonym", - "GI:94541117" - ], - [ - "gene_synonym", - "EcoGene:EG14426" - ] - ], - "dna_sequence": "ATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCGTCATGCTCGCAGGTTATACCTTTATTTTGCGTGCTGGCTAA", - "dna_sequence_length": 108, - "functions": [ - "putative membrane protein" - ], - "id": "CDS_2112", - "location": [ - [ - "NC_000913", - 2215657, - "+", - 108 - ] - ], - "md5": "fbf78720fddbe8925488ca92cf4fd01f", - "parent_gene": "", - "protein_md5": "39afb12f8e36ff9141ee3713e61b64bd", - "protein_translation": "MRIAKIGVIALFLFMALGGIGGVMLAGYTFILRAG", - "protein_translation_length": 35, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2128" - ], - [ - "gene_synonym", - "GI:16130066" - ], - [ - "gene_synonym", - "EcoGene:EG12009" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33359" - ], - [ - "gene_synonym", - "NP_416632.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007032" - ], - [ - "gene_synonym", - "ECK2121" - ], - [ - "gene_synonym", - "yehW" - ], - [ - "gene_synonym", - "JW2116" - ], - [ - "gene_synonym", - "GeneID:949028" - ] - ], - "dna_sequence": "ATGAAGATGTTGCGCGATCCGCTGTTCTGGCTCATTGCTCTGTTTGTGGCGCTGATTTTCTGGCTGCCTTACAGCCAGCCGCTGTTTGCTGCCTTGTTCCCACAACTGCCACGACCCGTTTATCAGCAAGAAAGTTTTGCAGCTCTGGCACTGGCTCATTTCTGGCTGGTGGGAATTTCGAGTTTGTTTGCGGTGATCATTGGCACTGGTGCCGGAATTGCTGTCACTCGCCCGTGGGGCGCGGAATTTCGCCCACTGGTGGAAACTATTGCCGCCGTTGGACAGACTTTTCCGCCCGTCGCAGTGCTGGCGATCGCCGTTCCGGTGATCGGCTTTGGTCTGCAACCAGCGATTATCGCCTTGATCCTTTACGGTGTGCTGCCCGTCCTGCAGGCGACACTTGCCGGGCTGGGAGCGATTGATGCCAGCGTGACAGAAGTTGCGAAAGGTATGGGAATGAGTCGTGGTCAGCGAGTGCGTAAGGTCGAGCTACCGCTGGCGGCTCCGGTGATTCTGGCGGGCGTGCGAACTTCGGTGATTATCAACATTGGTACGGCGACGATCGCCTCAACGGTAGGGGCCAGCACGCTGGGTACGCCCATCATCATCGGGCTTAGCGGATTTAATACCGCGTATGTGATCCAGGGGGCGTTACTGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAAAATAA", - "dna_sequence_length": 732, - "functions": [ - "putative ABC transporter permease" - ], - "id": "CDS_2113", - "location": [ - [ - "NC_000913", - 2216476, - "-", - 732 - ] - ], - "md5": "8a7e709b20374743d6b20ac399781ffa", - "parent_gene": "", - "protein_md5": "680021b10403fbf11d7c6fa44e8add86", - "protein_translation": "MKMLRDPLFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAVLAIAVPVIGFGLQPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRVRKVELPLAAPVILAGVRTSVIINIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGALLVALAAIIADRLFERLVQALSQHAK", - "protein_translation_length": 243, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416633.1" - ], - [ - "gene_synonym", - "b2129" - ], - [ - "gene_synonym", - "GI:16130067" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33360" - ], - [ - "gene_synonym", - "ASAP:ABE-0007034" - ], - [ - "gene_synonym", - "GeneID:946659" - ], - [ - "gene_synonym", - "ECK2122" - ], - [ - "gene_synonym", - "yehX" - ], - [ - "gene_synonym", - "JW2117" - ], - [ - "gene_synonym", - "EcoGene:EG12010" - ] - ], - "dna_sequence": "ATGATTGAATTTAGCCATGTCAGCAAACTGTTCGGCGCACAAAAAGCCGTTAACGATCTCAATCTCAATTTTCAGGAAGGGAGTTTTTCGGTGCTGATTGGCACATCTGGCTCCGGCAAATCCACCACCCTGAAAATGATTAACCGCCTGGTGGAGCATGACAGCGGAGAGATCCGCTTTGCCGGAGAAGAAATTCGCTCGCTGCCAGTACTGGAGTTGCGCCGCCGGATGGGCTATGCCATTCAATCTATTGGCCTGTTCCCCCACTGGAGCGTGGCGCAAAACATCGCTACCGTGCCGCAATTACAAAAATGGTCGCGGGCGCGGATTGACGATCGTATCGACGAATTAATGGCGCTACTGGGGCTGGAGTCAAATTTGCGTGAGCGTTATCCGCATCAGCTTTCCGGTGGTCAGCAGCAACGTGTGGGAGTGGCGCGTGCACTGGCTGCCGATCCGCAAGTCTTACTAATGGATGAACCTTTTGGCGCACTGGACCCGGTAACGCGCGGCGCGTTGCAACAAGAGATGACGCGCATTCACCGTTTGCTGGGGCGTACCATTGTGCTGGTCACTCATGATATTGATGAGGCGCTACGGCTGGCAGAACATCTGGTATTGATGGATCACGGTGAAGTAGTGCAGCAGGGCAATCCGCTGACGATGCTGACTCGTCCGGCGAATGATTTTGTCCGCCAGTTTTTTGGACGTAGTGAACTGGGTGTGCGCCTGCTTTCGTTACGTAGTGTGGCGGATTACGTGCGTCGCGAAGAACGAGCAGATGGTGAGGCACTGGCAGAAGAGATGACGCTACGCGATGCGCTCTCTCTGTTTGTTGCGCGGGGATGCGAGGTGCTGCCGGTGGTGAACATGCAGGGCCAGCCTTGCGGCACGCTGCATTTTCAGGATCTGCTGGTGGAGGCGTAA", - "dna_sequence_length": 927, - "functions": [ - "putative ABC transporter ATPase" - ], - "id": "CDS_2114", - "location": [ - [ - "NC_000913", - 2217407, - "-", - 927 - ] - ], - "md5": "7abdd019e8602e268d91b2381e661b72", - "parent_gene": "", - "protein_md5": "213aa882ca17cd6082f8eb4c042037fb", - "protein_translation": "MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGEIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQLQKWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDEPFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGNPLTMLTRPANDFVRQFFGRSELGVRLLSLRSVADYVRREERADGEALAEEMTLRDALSLFVARGCEVLPVVNMQGQPCGTLHFQDLLVEA", - "protein_translation_length": 308, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946660" - ], - [ - "gene_synonym", - "EcoGene:EG12011" - ], - [ - "gene_synonym", - "b2130" - ], - [ - "gene_synonym", - "GI:16130068" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33361" - ], - [ - "gene_synonym", - "JW2118" - ], - [ - "gene_synonym", - "ECK2123" - ], - [ - "gene_synonym", - "ASAP:ABE-0007038" - ], - [ - "gene_synonym", - "NP_416634.1" - ], - [ - "gene_synonym", - "yehY" - ] - ], - "dna_sequence": "GTGACTTATTTCCGTATTAATCCTGTTCTGGCGCTGCTGCTGTTGCTGACGGCAATCGCAGCGGCGCTGCCGTTTATCAGTTACGCGCCTAATCGTTTAGTTTCGGGTGAGGGGCGTCATCTCTGGCAGCTGTGGCCGCAAACGATCTGGATGCTGGTGGGCGTTGGTTGCGCCTGGCTGACGGCCTGTTTTATTCCCGGTAAAAAAGGCAGCATTTGTGCACTCATTCTGGCGCAATTCGTCTTCGTATTGCTGGTGTGGGGAGCTGGAAAGGCGGCGACCCAACTGGCGCAAAATGGCAGTGCGCTGGCGCGTACCAGCCTCGGCAGTGGTTTCTGGCTGGCTGCGGCGCTGGCATTGCTGGCCTGTAGCGATGCCATCCGCCGAATCTCCACGCATCCGCTGTGGCGCTGGTTGTTGCATATGCAGATTGCCATTATTCCGCTGTGGTTGCTGTACTCCGGCACGCTTAACGATCTCTCACTAATGAAAGAATACGCCAACCGTCAGGATGTGTTTGACGACGCGCTGGCACAACATCTGACGTTGCTGTTTGGTGCGGTGCTGCCTGCGTTAGTGATTGGTGTGCCGTTGGGCATCTGGTGCTACTTTTCCACTGCTCGGCAGGGGGCAATTTTTTCTCTGCTCAATGTGATTCAGACCGTGCCTTCGGTGGCGCTCTTTGGCCTGTTGATTGCGCCGCTTGCCGCGCTGGTTACGGCCTTTCCGTGGCTGGGGACGCTCGGCATAGCAGGAACCGGAATGACACCCGCACTGATTGCGCTGGTGCTCTATGCCTTGCTGCCGCTGGTGCGCGGCGTGGTAGTCGGTTTGAACCAGATCCCGCGCGATGTGCTGGAAAGCGCCAGAGCGATGGGGATGAGCGGGGCGCAGCGTTTCCTGCATGTTCAGTTACCGCTGGCGTTACCGGTATTTCTGCGCAGCCTGCGGGTGGTGATGGTGCAAACTGTAGGTATGGCGGTGATTGCGGCGTTAATCGGCGCAGGCGGTTTTGGTGCGCTGGTTTTCCAGGGGCTGCTAAGCAGCGCCATTGATTTAGTGTTGCTGGGGGTGATCCCGGTAATTGTTCTGGCGGTGCTTACCGACGCGCTGTTCGATTTGCTTATCGCACTGCTGAAGGTGAAACGTAATGATTGA", 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- [ - "gene_synonym", - "GeneID:946681" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33362" - ], - [ - "gene_synonym", - "ECK2124" - ], - [ - "gene_synonym", - "JW2119" - ], - [ - "gene_synonym", - "yehZ" - ], - [ - "gene_synonym", - "NP_416635.1" - ] - ], - "dna_sequence": "ATGCCACTCTTAAAGCTCTGGGCAGGTTCACTGGTTATGTTGGCAGCCGTGAGCCTGCCGCTACAGGCGGCTTCCCCCGTTAAAGTCGGTTCAAAAATCGATACCGAAGGTGCGCTACTCGGCAATATCATTTTGCAGGTGCTGGAAAGCCACGGCGTACCGACGGTGAATAAAGTGCAACTCGGAACGACTCCTGTGGTGCGCGGGGCGATTACTTCCGGTGAACTGGATATCTATCCGGAATATACCGGCAATGGCGCTTTCTTCTTTAAAGATGAAAACGATGCAGCGTGGAAAAACGCGCAGCAAGGTTACGAGAAAGTCAAAAAGCTCGATTCGGAGCACAACAAGTTAATCTGGCTGACGCCCGCGCCTGCAAATAACACCTGGACTATCGCCGTGCGTCAGGATGTGGCAGAGAAAAATAAACTCACTTCGCTTGCCGACCTGAGTCGTTATCTGCAAGAGGGCGGCACCTTCAAACTGGCAGCCTCGGCAGAGTTTATCGAACGCGCCGATGCGTTACCCGCGTTTGAAAAAGCCTATGGCTTTAAGCTCGGTCAGGATCAGTTGCTGTCACTGGCTGGTGGCGACACGGCGGTGACGATCAAAGCCGCTGCCCAGCAAACCTCTGGCGTTAATGCTGCAATGGCTTACGGCACTGACGGCCCGGTAGCGGCGCTGGGGCTGCAAACCTTAAGCGATCCGCAAGGTGTGCAACCTATCTACGCGCCTGCACCAGTGGTGCGTGAGTCGGTGTTGAGGGAGTATCCGCAAATGGCACAGTGGCTACAGCCAGTCTTCGCCAGCCTCGATGCAAAAACATTGCAGCAACTGAATGCCAGCATTGCTGTGGAAGGACTGGATGCCAAAAAAGTGGCTGCCGACTACCTGAAACAAAAAGGGTGGACGAAGTAA", - "dna_sequence_length": 918, - "functions": [ - "putative ABC transporter periplasmic binding protein" - ], - "id": "CDS_2116", - "location": [ - [ - "NC_000913", - 2219481, - "-", - 918 - ] - ], - "md5": "4c6e35fe020adf094df31ea076580e03", - "parent_gene": "", - "protein_md5": "d572aa6ab6a64fad9282a20959414f10", - "protein_translation": "MPLLKLWAGSLVMLAAVSLPLQAASPVKVGSKIDTEGALLGNIILQVLESHGVPTVNKVQLGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDAAWKNAQQGYEKVKKLDSEHNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLQEGGTFKLAASAEFIERADALPAFEKAYGFKLGQDQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAALGLQTLSDPQGVQPIYAPAPVVRESVLREYPQMAQWLQPVFASLDAKTLQQLNASIAVEGLDAKKVAADYLKQKGWTK", - "protein_translation_length": 305, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "glh" - ], - [ - "gene_synonym", - "NP_416636.1" - ], - [ - "gene_synonym", - "EcoGene:EG12013" - ], - [ - "gene_synonym", - "ASAP:ABE-0007043" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33363" - ], - [ - "gene_synonym", - "yohA" - ], - [ - "gene_synonym", - "b2132" - ], - [ - "gene_synonym", - "GI:16130070" - ], - [ - "gene_synonym", - "GeneID:946682" - ], - [ - "gene_synonym", - "ECK2125" - ], - [ - "gene_synonym", - "bglX" - ], - [ - "gene_synonym", - "JW2120" - ] - ], - "dna_sequence": "ATGAAATGGCTATGTTCAGTAGGAATCGCGGTGAGTCTGGCCCTGCAGCCAGCACTGGCGGATGATTTATTCGGCAACCATCCATTAACGCCCGAAGCGCGGGATGCGTTCGTCACCGAACTGCTTAAGAAAATGACAGTTGATGAGAAAATTGGTCAGCTGCGCTTAATCAGCGTCGGCCCGGATAACCCGAAAGAGGCGATCCGCGAGATGATCAAAGACGGTCAGGTTGGGGCGATTTTCAACACCGTAACCCGTCAGGATATCCGCGCCATGCAGGATCAGGTGATGGAATTAAGCCGCCTGAAAATTCCTCTTTTCTTTGCTTACGACGTGCTGCACGGTCAGCGCACGGTGTTCCCGATTAGCCTCGGTCTGGCCTCGTCTTTTAACCTCGATGCAGTGAAAACGGTCGGACGTGTCTCTGCTTATGAAGCGGCAGATGATGGCCTGAATATGACCTGGGCACCGATGGTCGATGTCTCGCGCGATCCGCGCTGGGGACGTGCTTCCGAAGGTTTTGGCGAAGATACGTATCTCACCTCAACAATGGGTAAAACCATGGTGGAAGCGATGCAGGGTAAAAGCCCGGCAGATCGCTACTCGGTGATGACCAGCGTCAAACACTTTGCCGCATACGGCGCGGTAGAAGGCGGTAAAGAGTACAACACCGTCGATATGAGTCCGCAGCGCCTGTTTAATGATTATATGCCGCCGTACAAAGCGGGGCTGGACGCAGGCAGCGGCGCGGTGATGGTGGCGCTGAACTCGCTGAACGGCACGCCAGCCACCTCCGATTCCTGGCTGCTGAAAGATGTTCTGCGCGACCAGTGGGGCTTTAAAGGCATCACCGTTTCCGATCACGGTGCAATCAAAGAGCTGATTAAACATGGCACGGCGGCAGACCCGGAAGATGCGGTGCGCGTGGCGCTGAAATCCGGAATCAACATGAGCATGAGCGACGAGTACTACTCGAAGTATCTGCCTGGGTTGATTAAATCCGGCAAAGTGACGATGGCAGAGCTGGACGATGCTGCCCGCCATGTACTGAACGTTAAATATGATATGGGGTTGTTTAACGACCCATACAGCCATTTGGGGCCGAAAGAGTCTGACCCGGTGGATACCAATGCCGAAAGCCGCCTGCACCGTAAAGAAGCGCGTGAAGTGGCGCGCGAAAGCTTGGTGTTGCTGAAAAACCGTCTCGAAACGTTACCGCTGAAAAAATCGGCCACCATTGCGGTGGTTGGGCCACTGGCGGACAGTAAACGTGACGTGATGGGCAGCTGGTCCGCAGCCGGTGTTGCCGATCAATCCGTGACCGTACTGACCGGGATTAAAAATGCCGTCGGTGAAAACGGTAAAGTGCTGTATGCCAAAGGGGCGAACGTTACCAGTGACAAAGGCATTATCGATTTCCTGAATCAGTATGAAGAAGCGGTCAAAGTCGATCCGCGTTCGCCGCAAGAGATGATTGATGAAGCGGTGCAGACGGCGAAACAATCTGATGTGGTGGTGGCTGTAGTCGGTGAAGCACAGGGGATGGCGCACGAAGCCTCCAGCCGGACCGATATCACTATTCCGCAAAGCCAACGTGACTTGATTGCGGCGCTGAAAGCCACCGGTAAACCGCTGGTGCTGGTGCTGATGAACGGGCGTCCGCTGGCGCTGGTGAAAGAAGATCAGCAGGCTGATGCGATTCTGGAAACCTGGTTTGCGGGGACTGAAGGCGGTAATGCAATTGCCGATGTATTGTTTGGCGATTACAACCCGTCCGGCAAGCTGCCAATGTCCTTCCCGCGTTCTGTCGGGCAGATCCCGGTGTACTACAGCCATCTGAATACCGGTCGCCCGTATAATGCCGACAAGCCGAACAAATACACTTCGCGTTATTTTGATGAAGCTAACGGGGCGTTGTATCCGTTCGGCTATGGGCTGAGCTACACCACTTTCACCGTCTCTGATGTGAAACTTTCTGCGCCGACCATGAAGCGTGACGGCAAAGTGACTGCCAGCGTGCAGGTGACGAACACCGGTAAGCGCGAGGGTGCCACGGTAGTGCAGATGTACTTGCAGGATGTGACGGCTTCCATGAGTCGCCCTGTGAAACAGCTGAAAGGCTTTGAGAAAATCACCCTGAAACCGGGCGAAACTCAGACTGTCAGCTTCCCGATCGATATTGAGGCGCTGAAGTTCTGGAATCAACAGATGAAATATGACGCCGAGCCTGGCAAGTTCAATGTCTTTATCGGCACTGATTCCGCACGCGTTAAGAAAGGCGAGTTTGAGTTGCTGTAA", - "dna_sequence_length": 2298, - "functions": [ - "beta-D-glucoside glucohydrolase, periplasmic" - ], - "id": "CDS_2117", - "location": [ - [ - "NC_000913", - 2221989, - "-", - 2298 - ] - ], - "md5": "cebff8996a2176fab65e9eaf97007918", - "parent_gene": "", - "protein_md5": "e68ffefc2094b23fdfa3dea8e02ec7ca", - "protein_translation": "MKWLCSVGIAVSLALQPALADDLFGNHPLTPEARDAFVTELLKKMTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRLKIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVDVSRDPRWGRASEGFGEDTYLTSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKSGKVTMAELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKNRLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNAVGENGKVLYAKGANVTSDKGIIDFLNQYEEAVKVDPRSPQEMIDEAVQTAKQSDVVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQTVSFPIDIEALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFELL", - "protein_translation_length": 765, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "dld" - ], - [ - "gene_synonym", - "b2133" - ], - [ - "gene_synonym", - "GI:16130071" - ], - [ - "gene_synonym", - "ASAP:ABE-0007048" - ], - [ - "gene_synonym", - "NP_416637.1" - ], - [ - "gene_synonym", - "EcoGene:EG10231" - ], - [ - "gene_synonym", - "ECK2126" - ], - [ - "gene_synonym", - "JW2121" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06149" - ], - [ - "gene_synonym", - "GeneID:946653" - ] - ], - "dna_sequence": "ATGTCTTCCATGACAACAACTGATAATAAAGCCTTTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTATCGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTCTTGGCAAGGGCGAACAGGTGCTGGCCTATCCGGGCACCACGCTCTATTCGCTGGAAAAAGCCCTCAAACCGCTGGGACGCGAACCGCACTCAGTGATTGGATCATCGTGTATAGGCGCATCGGTCATCGGCGGTATTTGTAACAACTCCGGCGGCTCGCTGGTGCAACGTGGCCCGGCGTATACCGAAATGTCGTTATTCGCGCGTATAAATGAAGACGGCAAACTGACGCTGGTGAACCATCTGGGGATTGATCTGGGCGAAACGCCGGAGCAGATCCTTAGCAAGCTGGATGATGATCGCATCAAAGATGACGATGTGCGTCACGATGGTCGTCACGCCCACGATTATGACTATGTCCACCGCGTTCGTGATATTGAAGCCGACACGCCCGCACGTTATAACGCCGATCCTGATCGGTTATTTGAATCTTCTGGTTGCGCCGGGAAGCTGGCGGTCTTTGCAGTACGTCTTGATACCTTCGAAGCGGAAAAAAATCAGCAGGTGTTTTATATCGGCACCAACCAGCCGGAAGTGCTGACCGAAATCCGCCGTCATATTCTGGCTAACTTCGAAAATCTGCCGGTTGCCGGGGAATATATGCACCGGGATATCTACGATATTGCGGAAAAATACGGCAAAGACACCTTCCTGATGATTGATAAGTTAGGCACCGACAAGATGCCGTTCTTCTTTAATCTCAAGGGACGCACCGATGCGATGCTGGAGAAAGTGAAATTCTTCCGTCCGCATTTTACTGACCGTGCGATGCAAAAATTCGGTCACCTGTTCCCCAGCCATTTACCGCCGCGCATGAAAAACTGGCGCGATAAATACGAGCATCATCTGCTGTTAAAAATGGCGGGCGATGGCGTGGGCGAAGCCAAATCGTGGCTGGTGGATTATTTCAAACAGGCCGAAGGCGATTTCTTTGTCTGTACGCCGGAGGAAGGCAGCAAAGCGTTTTTACACCGTTTCGCCGCTGCGGGCGCAGCAATTCGTTATCAGGCGGTGCATTCCGATGAAGTCGAAGACATTCTGGCGTTGGATATCGCTCTGCGGCGTAACGACACCGAGTGGTATGAGCATTTACCGCCGGAGATCGACAGCCAGCTGGTGCACAAGCTCTATTACGGCCATTTTATGTGCTATGTCTTCCATCAGGATTACATAGTGAAAAAAGGCGTGGATGTGCATGCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGATCGGTAAAACCAGTAAACGGAAAAACTGGCAGGAAGTGGAGTAA", - "dna_sequence_length": 1716, - "functions": [ - "D-lactate dehydrogenase, FAD-binding, NADH independent" - ], - "id": "CDS_2118", - "location": [ - [ - "NC_000913", - 2222185, - "+", - 1716 - ] - ], - "md5": "38767be14afc515e4d7d20a02a473db6", - "parent_gene": "", - "protein_md5": "a5e840582b686cd8ce1e1d13ef92c2f3", - "protein_translation": "MSSMTTTDNKAFLNELARLVGSSHLLTDPAKTARYRKGFRSGQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGKGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGTDKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHLLLKMAGDGVGEAKSWLVDYFKQAEGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSDEVEDILALDIALRRNDTEWYEHLPPEIDSQLVHKLYYGHFMCYVFHQDYIVKKGVDVHALKEQMLELLQQRGAQYPAEHNVGHLYKAPETLQKFYRENDPTNSMNPGIGKTSKRKNWQEVE", - "protein_translation_length": 571, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416638.4" - ], - [ - "gene_synonym", - "GI:162135905" - ], - [ - "gene_synonym", - "ASAP:ABE-0007050" - ], - [ - "gene_synonym", - "JW5355" - ], - [ - "gene_synonym", - "yohB" - ], - [ - "gene_synonym", - "b2134" - ], - [ - "gene_synonym", - "pbpG" - ], - [ - "gene_synonym", - "ECK2127" - ], - [ - "gene_synonym", - "EcoGene:EG12015" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFI5" - ], - [ - "gene_synonym", - "psv" - ], - [ - "gene_synonym", - "GeneID:946662" - ] - ], - "dna_sequence": "ATGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCAGCCGCTACCACCGCTTCACAACCGGAAATTGCCTCCGGTAGCGCGATGATTGTTGATCTGAATACCAACAAAGTGATCTATTCGAACCACCCGGATCTGGTGCGTCCGATTGCGTCTATCAGCAAATTAATGACCGCGATGGTTGTGCTGGATGCACGACTGCCGCTGGATGAAAAACTAAAAGTGGATATCAGCCAGACGCCGGAGATGAAAGGGGTCTATTCGCGCGTACGACTGAATAGCGAAATCAGCCGTAAAGATATGCTGTTGCTGGCGCTGATGTCTTCAGAAAACCGCGCGGCGGCAAGCCTTGCGCACCATTATCCCGGTGGTTACAAAGCCTTTATTAAGGCAATGAATGCGAAAGCGAAATCGCTCGGAATGAACAACACGCGCTTTGTTGAACCTACCGGATTGTCGGTGCATAACGTTTCAACTGCCCGTGACTTAACCAAACTGCTCATTGCCAGCAAACAATATCCGTTGATCGGGCAGTTAAGTACTACCCGGGAAGATATGGCAACCTTCTCTAATCCGACGTATACGCTGCCGTTCCGCAATACTAATCATCTGGTGTATCGCGATAACTGGAATATTCAGTTAACCAAAACCGGCTTTACCAATGCGGCGGGCCATTGTCTGGTGATGCGTACGGTTATCAATAATAAACCGGTGGCGCTGGTAGTGATGGACGCGTTTGGCAAATATACCCATTTTGCCGATGCCAGCCGCCTGCGTACCTGGATTGAAACCGGTAAAGTGATGCCTGTGCCGGCAGCAGCGTTGAGCTATAAAAAACAAAAAGCCGCCCAAATGGCGGCGGCGGGGCAGACGGCACAGAACGATTAA", - "dna_sequence_length": 933, - "functions": [ - "D-alanyl-D-alanine endopeptidase" - ], - "id": "CDS_2119", - "location": [ - [ - "NC_000913", - 2224870, - "-", - 933 - ] - ], - "md5": "2f0b1b300a0182ab280e26278f228b64", - "parent_gene": "", - "protein_md5": "bd4a08d67c52714fec8b4e9aec6326ef", - "protein_translation": "MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTWIETGKVMPVPAAALSYKKQKAAQMAAAGQTAQND", - "protein_translation_length": 310, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007053" - ], - [ - "gene_synonym", - "NP_416639.2" - ], - [ - "gene_synonym", - "GeneID:946666" - ], - [ - "gene_synonym", - "JW5356" - ], - [ - "gene_synonym", - "yohC" - ], - [ - "gene_synonym", - "b2135" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD17" - ], - [ - "gene_synonym", - "EcoGene:EG12016" - ], - [ - "gene_synonym", - "GI:90111394" - ], - [ - "gene_synonym", - "ECK2128" - ] - ], - "dna_sequence": "ATGAGCCATGTCTGGGGACTGTTTTCCCATCCCGATCGTGAAATGCAGGTGATTAATCGCGAAAACGAAACGATTTCTCACCATTACACCCACCACGTTTTGCTGATGGCGGCGATTCCGGTGATTTGCGCCTTCATTGGCACTACACAGATTGGCTGGAATTTTGGCGATGGCACTATCCTGAAGTTATCCTGGTTTACCGGACTGGCGCTGGCTGTCTTGTTTTACGGCGTTATGCTGGCTGGGGTCGCGGTGATGGGGCGGGTCATCTGGTGGATGGCGCGTAATTATCCGCAGCGTCCGTCACTTGCGCACTGCATGGTCTTCGCGGGCTACGTTGCAACTCCGCTGTTTTTAAGCGGTCTGGTGGCGCTTTATCCACTGGTCTGGTTGTGTGCGCTGGTCGGCACGGTGGCGCTGTTTTACACCGGCTACCTGCTTTACCTTGGTATTCCGAGCTTCCTGAATATCAACAAAGAGGAAGGCCTTAGCTTCTCTAGTTCGACGCTGGCGATTGGCGTGCTGGTACTGGAAGTGCTGCTCGCCCTAACCGTTATACTATGGGGCTACGGTTATCGTTTGTTCTAG", - "dna_sequence_length": 588, - "functions": [ - "Yip1 family inner membrane protein" - ], - "id": "CDS_2120", - "location": [ - [ - "NC_000913", - 2225631, - "-", - 588 - ] - ], - "md5": "9046e20e1756807ab62c254bed7c1f7f", - "parent_gene": "", - "protein_md5": "dacf8958b65df1f1a5cefd58154fc07b", - "protein_translation": "MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF", - "protein_translation_length": 195, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12017" - ], - [ - "gene_synonym", - "GeneID:946661" - ], - [ - "gene_synonym", - "ASAP:ABE-0007059" - ], - [ - "gene_synonym", - "yohD" - ], - [ - "gene_synonym", - "b2136" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33366" - ], - [ - "gene_synonym", - "JW2124" - ], - [ - "gene_synonym", - "GI:90111395" - ], - [ - "gene_synonym", - "ECK2129" - ], - [ - "gene_synonym", - "NP_416640.2" - ] - ], - "dna_sequence": "ATGGATCTCAATACACTTATCTCACAATATGGTTATGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGAAACCGTGACTTTGCTGGGAGGCGTTGCGGCGCATCAGGGGCTATTAAAGTTCCCGCTGGTGGTACTTTCTGTGGCGCTTGGCGGCATGATTGGCGACCAGGTGCTCTATCTGTGCGGGCGGCGGTTTGGCGGCAAGCTGTTACGCCGTTTCTCGAAACATCAGGATAAAATTGAGCGGGCGCAGAAACTTATCCAACGCCATCCGTATCTGTTTGTCATTGGTACGCGCTTTATGTATGGCTTTCGGGTGATTGGCCCGACGCTGATTGGTGCCAGCCAGCTGCCGCCGAAAATCTTTCTGCCGCTGAATATTCTCGGCGCATTTGCCTGGGCGTTGATTTTTACCACTATTGGTTACGCTGGTGGTCAGGTGATTGCGCCGTGGTTGCACAATCTCGACCAGCATTTGAAGCACTGGGTCTGGTTGATTCTGGTCGTGGTTCTGGTGGTGGGCGTGCGCTGGTGGCTGAAACGACGCGGGAAGAAAAAGCCGGATCATCAGGCGTAA", - "dna_sequence_length": 579, - "functions": [ - "DedA family inner membrane protein" - ], - "id": "CDS_2121", - "location": [ - [ - "NC_000913", - 2225801, - "+", - 579 - ] - ], - "md5": "a034adac4ad03b1595f0eb2a0c581a86", - "parent_gene": "", - "protein_md5": "bd746f031ac35e4941f4f42ebd2ec376", - "protein_translation": "MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHLKHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA", - "protein_translation_length": 192, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:949126" - ], - [ - "gene_synonym", - "GI:16130075" - ], - [ - "gene_synonym", - "EcoGene:EG12019" - ], - [ - "gene_synonym", - "yohE" - ], - [ - "gene_synonym", - "b2137" - ], - [ - "gene_synonym", - "ECK2130" - ], - [ - "gene_synonym", - "yohF" - ], - [ - "gene_synonym", - "JW2125" - ], - [ - "gene_synonym", - "NP_416641.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33368" - ], - [ - "gene_synonym", - "ASAP:ABE-0007062" - ] - ], - "dna_sequence": "ATGGCACAGGTTGCGATTATTACCGCCTCCGATTCGGGGATCGGCAAAGAGTGCGCGTTATTACTGGCGCAGCAGGGGTTTGATATTGGTATTACCTGGCACTCAGATGAAGAAGGGGCAAAAGATACCGCGCGTGAGGTAGTTAGCCACGGCGTACGTGCGGAGATCGTGCAGCTGGATCTCGGCAATCTACCAGAAGGGGCACTGGCGCTGGAGAAACTCATTCAACGGCTGGGGCGCATTGATGTGCTGGTGAATAATGCGGGTGCAATGACCAAAGCGCCGTTTCTTGATATGGCTTTTGATGAGTGGCGCAAGATTTTTACCGTTGATGTCGATGGTGCATTCTTATGCTCGCAAATTGCGGCTCGTCAGATGGTGAAACAAGGGCAGGGCGGTCGCATCATCAACATTACGTCGGTACATGAACATACGCCGCTGCCGGATGCCAGCGCCTACACAGCCGCTAAACATGCGCTCGGTGGGTTAACCAAAGCGATGGCGCTGGAGCTGGTCAGGCATAAGATTTTGGTGAACGCAGTCGCGCCTGGGGCGATCGCCACGCCAATGAATGGCATGGATGACAGCGACGTGAAGCCCGACGCGGAGCCTTCGATTCCCTTGCGGCGTTTTGGCGCAACGCATGAGATTGCCAGCCTGGTGGTGTGGCTTTGTTCGGAGGGCGCAAATTACACCACCGGGCAGTCGTTGATAGTGGATGGCGGCTTTATGTTGGCGAATCCACAGTTCAACCCAGAATAG", - "dna_sequence_length": 762, - "functions": [ - "putative oxidoreductase" - ], - "id": "CDS_2122", - "location": [ - [ - "NC_000913", - 2227270, - "-", - 762 - ] - ], - "md5": "0c9644b17bfa236d0516c27bcb918c26", - "parent_gene": "", - "protein_md5": "8fa67400b82d23357143c69a2121aca7", - "protein_translation": "MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIASLVVWLCSEGANYTTGQSLIVDGGFMLANPQFNPE", - "protein_translation_length": 253, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2139" - ], - [ - "gene_synonym", - "yohH" - ], - [ - "gene_synonym", - "mdtQ" - ], - [ - "gene_synonym", - "EcoGene:EG12020" - ], - [ - "gene_synonym", - "GeneID:949123" - ], - [ - "gene_synonym", - "yohG" - ], - [ - "gene_synonym", - "JW5838" - ], - [ - "gene_synonym", - "ECK2131" - ], - [ - "gene_synonym", - "ASAP:ABE-0007067" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33369" - ], - [ - "gene_synonym", - "ASAP:ABE-0007071" - ] - ], - "dna_sequence": "ATGAATCGTGATTCCTTTTATCCAGCCATCGCCTGTTTTCCGCTGTTACTGATGCTGGCCGGGTGTGCGCCTATGCATGAAACCCGCCAGGCGTTAAGCCAGCAAACGCCCGCTGCACAAGTTGACACCGCATTACCCACGGCGCTGAAAAATGGTTGGCCAGACAGCCAATGGTGGCTGGAGTATCACGATAATCAACTCACTTCCTTAATTAACAATGCACTACAGAACGCACCGGATATGCAGGTGGCTGAACAGCGCATTCAGCTAGCTGAAGCCCAGGCGAAGGCAGTTGCCACTCAGGATGGTCCGCAGATCGACTTTTCGGCGGATATGGAGCGGCAAAAAATGTCGGCAGAAGGCTTAATGGGGCCGTTTGCTCTGAACGATCCGGCCGCAGGTACGACCGGCCCGTGGTACACCAACGGTACTTTTGGCTTAACGGCGGGCTGGCATCTCGATATCTGGGGAAAGAATCGGGCGGAGGTTACTGCCCGCCTGGGTACGGTTAAAGCACGGGCGGCGGAACGCGAGCAAACCCGCCAATTGCTGGCTGGCAGCGTAGCCCGCCTGTACTGGGAGTGGCAAACCCAGGCGGCGTTAAACACGGTCTTGCAGCAAATAGAAAAAGAGCAGAACACCATTATCGCGACCGATCGCCAGCTATATCAGAACGGGATTACTTCTTCAGTTGAAGGTGTGGAAACCGATATTAATGCCAGCAAAACCCGGCAGCAGCTCAACGATGTCGCGGGGAAAATGAAAATTATTGAGGCACGGTTAAGCGCACTTACAAATAACCAGACAAAGTCATTGAAGCTTAAACCGGTCGCGTTGCCGAAAGTGGCAAGCCAGCTTCCTGATGAACTGGGGTACTCCTTACTGGCCCGGCGGGCAGATTTGCAGGCGGCGCACTGGTACGTTGAGTCATCGCTAAGCACCATTGATGCGGCAAAAGCGGCATTTTATCCTGACATCAACCTGATGGCCTTCCTGCAACAGGATGCGTTGCACTTAAGCGATCTGTTCCGTCATTCCGCGCAGCAAATGGGCGTTACGGCAGGCCTGACGCTACCCATTTTCGATAGTGGTCGTCTTAACGCCAATCTCGATATCGCAAAAGCCGAAAGCAACTTGTCTATCGCCAGCTACAACAAAGCGGTGGTTGAAGCGGTGAATGACGTGGCGCGGGCAGCCAGTCAGGTTCAGACACTGGCGGAGAAAAACCAGCATCAGGCGCAAATTGAGCGCGATGCCTTGCGTGTGGTAGGTCTTGCGCAGGCGCGCTTTAACGCGGGCATCATTGCTGGTTCCCGCGTCAGCGAAGCCAGAATCCCCGCGCTGCGTGAGCGGGCCAATGGCCTGTTATTGCAAGGGCAGTGGCTGGATGCCTCCATTCAACTCACTGGTGCGTTGGGCGGGGGGTACAAACGCTGA", 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"YP_002791249.1" - ], - [ - "gene_synonym", - "GeneID:7751636" - ], - [ - "gene_synonym", - "yohP" - ], - [ - "gene_synonym", - "b4679" - ], - [ - "gene_synonym", - "GI:226524732" - ], - [ - "gene_synonym", - "ECK4494" - ] - ], - "dna_sequence": "ATGAAAATTATACTCTGGGCTGTATTGATTATTTTCCTGATTGGGCTACTGGTGGTGACTGGCGTATTTAAGATGATATTTTAA", - "dna_sequence_length": 84, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2124", - "location": [ - [ - "NC_000913", - 2228982, - "+", - 84 - ] - ], - "md5": "02d1a105a164c66237965efb787c4ac4", - "parent_gene": "", - "protein_md5": "f904ab5a2ed008d88229cd0dabca5d7b", - "protein_translation": "MKIILWAVLIIFLIGLLVVTGVFKMIF", - "protein_translation_length": 27, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yohI" - ], - [ - "gene_synonym", - "GI:16130078" - ], - [ - "gene_synonym", - "GeneID:945458" - ], - [ - "gene_synonym", - "EcoGene:EG12022" - ], - [ - "gene_synonym", - "b2140" - ], - [ - "gene_synonym", - "dusC" - ], - [ - "gene_synonym", - "ECK2133" - ], - [ - "gene_synonym", - "ASAP:ABE-0007074" - ], - [ - "gene_synonym", - "JW2128" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33371" - ], - [ - "gene_synonym", - "NP_416645.1" - ] - ], - "dna_sequence": "ATGCGTGTGTTACTGGCACCGATGGAGGGAGTGCTTGACTCTCTGGTGCGTGAATTGCTGACCGAAGTTAACGACTACGATCTGTGCATCACCGAGTTTGTCCGCGTGGTGGATCAACTGCTGCCGGTAAAAGTCTTTCATCGCATTTGCCCTGAGCTACAAAACGCCAGCCGGACACCATCTGGTACGCTGGTGCGCGTGCAGTTGTTAGGTCAGTTCCCACAATGGCTGGCAGAGAACGCCGCCCGTGCGGTGGAGTTAGGTTCCTGGGGCGTGGATCTCAATTGCGGCTGCCCGTCGAAAACGGTTAACGGTAGCGGCGGCGGGGCGACGTTACTCAAAGATCCTGAACTCATCTACCAGGGTGCAAAAGCGATGCGTGAAGCTGTACCGGCGCATTTGCCCGTCAGCGTGAAAGTGCGTCTGGGCTGGGACAGCGGTGAGAAGAAATTTGAAATCGCCGATGCGGTTCAACAGGCTGGCGCTACGGAGCTGGTGGTGCATGGGCGGACGAAAGAGCAGGGTTACCGCGCGGAGCATATTGACTGGCAGGCGATTGGCGATATTCGCCAGCGGCTGAATATTCCGGTGATTGCCAACGGTGAAATCTGGGACTGGCAGAGCGCGCAACAATGCATGGCGATCAGCGGCTGCGACGCAGTGATGATTGGTCGCGGGGCGCTCAATATTCCCAACCTGAGCCGGGTGGTAAAATATAACGAACCGCGAATGCCGTGGCCGGAGGTGGTTGCTTTGCTGCAAAAATATACCCGTCTGGAAAAGCAGGGCGATACCGGGTTATATCACGTTGCGCGGATTAAACAGTGGTTGAGTTATTTGCGTAAAGAATACGATGAAGCAACGGAATTATTTCAGCATGTTCGGGTGTTGAATAATTCCCCTGATATTGCAAGGGCTATTCAGGCAATTGATATCGAGAAACTCTAA", - "dna_sequence_length": 948, - "functions": [ - "tRNA-dihydrouridine synthase C" - ], - "id": "CDS_2125", - "location": [ - [ - "NC_000913", - 2230385, - "-", - 948 - ] - ], - "md5": "30a99133ee7c5e0d2a1d105bebe7ed03", - "parent_gene": "", - "protein_md5": "a5e5c5aa3a79360423d06fbe0b5e93d7", - "protein_translation": "MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKYNEPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL", - "protein_translation_length": 315, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yohJ" - ], - [ - "gene_synonym", - "GI:16130079" - ], - [ - "gene_synonym", - "EcoGene:EG12023" - ], - [ - "gene_synonym", - "NP_416646.1" - ], - [ - "gene_synonym", - "b2141" - ], - [ - "gene_synonym", - "GeneID:949127" - ], - [ - "gene_synonym", - "ASAP:ABE-0007078" - ], - [ - "gene_synonym", - "ECK2134" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60632" - ], - [ - "gene_synonym", - "JW2129" - ] - ], - "dna_sequence": "ATGAGTAAGACACTGAACATTATCTGGCAATATTTACGCGCTTTCGTCCTGATTTATGCCTGCCTGTATGCAGGCATTTTCATTGCTTCCCTGCTACCGGTAACCATTCCGGGCAGCATCATCGGGATGCTGATCCTGTTTGTCCTGCTGGCCTTGCAAATTCTTCCGGCAAAATGGGTCAATCCGGGGTGCTACGTACTGATTCGCTATATGGCGCTATTGTTTGTGCCGATTGGCGTAGGCGTCATGCAATATTTTGATTTGCTCCGCGCACAGTTTGGCCCGGTAGTGGTTTCCTGTGCAGTCAGTACGCTGGTGGTTTTTCTGGTGGTGAGCTGGAGTTCGCAACTGGTACACGGTGAACGTAAAGTCGTAGGTCAGAAAGGATCAGAAGAATGA", - "dna_sequence_length": 399, - "functions": [ - "UPF0299 family inner membrane protein" - ], - "id": "CDS_2126", - "location": [ - [ - "NC_000913", - 2230624, - "+", - 399 - ] - ], - "md5": "1116b51173e818c8b5bdcfafe704fdee", - "parent_gene": "", - "protein_md5": "034812e0808f904f3a4bfabed5cd83dc", - "protein_translation": "MSKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGMLILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAVSTLVVFLVVSWSSQLVHGERKVVGQKGSEE", - "protein_translation_length": 132, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD19" - ], - [ - "gene_synonym", - "yohK" - ], - [ - "gene_synonym", - "ASAP:ABE-0007080" - ], - [ - "gene_synonym", - "EcoGene:EG12024" - ], - [ - "gene_synonym", - "GI:16130080" - ], - [ - "gene_synonym", - "GeneID:949125" - ], - [ - "gene_synonym", - "b2142" - ], - [ - "gene_synonym", - "NP_416647.1" - ], - [ - "gene_synonym", - "JW2130" - ], - [ - "gene_synonym", - "ECK2135" - ] - ], - "dna_sequence": "ATGATGGCGAATATCTGGTGGTCATTACCGCTGACATTGATTGTCTTTTTTGCCGCCCGCAAACTGGCGGCACGGTATAAGTTTCCCTTGCTTAACCCGTTGCTGGTAGCAATGGTGGTGATCATTCCTTTTTTAATGCTGACTGGCATCTCTTACGACAGCTACTTTAAAGGTAGCGAAGTGCTAAACGATCTGCTGCAACCGGCGGTCGTCGCGCTGGCCTATCCTTTATATGAGCAGCTACACCAGATCCGCGCGCGCTGGAAATCGATCATCACCATCTGTTTTATCGGCAGCGTGGTTGCGATGGTGACGGGGACTTCCGTGGCATTGTTGATGGGCGCTTCACCGGAAATCGCCGCGTCAATCCTGCCGAAATCAGTCACCACGCCTATTGCAATGGCGGTTGGCGGCAGTATTGGCGGTATTCCGGCAATCAGCGCAGTTTGCGTGATTTTCGTCGGCATCCTCGGCGCGGTATTTGGCCATACATTGCTTAATGCGATGCGTATTCGTACCAAAGCTGCGCGCGGTCTGGCAATGGGGACTGCCTCGCACGCCCTCGGTACGGCGCGCTGCGCCGAGCTGGATTATCAGGAAGGTGCATTTAGTTCGCTAGCGCTGGTGTTATGCGGGATAATTACTTCGCTGATCGCACCGTTCCTTTTCCCGATTATTCTGGCAGTAATGGGCTAA", - "dna_sequence_length": 696, - "functions": [ - "LrgB family inner membrane protein" - ], - "id": "CDS_2127", - "location": [ - [ - "NC_000913", - 2231019, - "+", - 696 - ] - ], - "md5": "35e9318c5164e6bfa47df362cfd67b15", - "parent_gene": "", - "protein_md5": "7fc6198ad0e72c7774675f8752b6dd6b", - "protein_translation": "MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPFLMLTGISYDSYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVAMVTGTSVALLMGASPEIAASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAVFGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLIAPFLFPIILAVMG", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cdd" - ], - [ - "gene_synonym", - "GeneID:946663" - ], - [ - "gene_synonym", - "EcoGene:EG10137" - ], - [ - "gene_synonym", - "NP_416648.1" - ], - [ - "gene_synonym", - "GI:16130081" - ], - [ - "gene_synonym", - "b2143" - ], - [ - "gene_synonym", - "JW2131" - ], - [ - "gene_synonym", - "ECK2136" - ], - [ - "gene_synonym", - "ASAP:ABE-0007086" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABF6" - ] - ], - "dna_sequence": "ATGCATCCACGTTTTCAAACCGCTTTTGCCCAACTTGCGGATAACTTGCAATCTGCACTGGAACCTATTCTGGCAGACAAGTACTTCCCCGCTTTGTTGACCGGGGAGCAAGTCTCATCGCTGAAGAGCGCAACGGGGCTGGACGAAGACGCGCTGGCATTCGCACTACTTCCGCTGGCGGCGGCCTGTGCGCGTACGCCATTGTCGAATTTTAATGTTGGCGCAATTGCGCGCGGTGTGAGCGGAACCTGGTATTTCGGTGCCAATATGGAATTTATTGGTGCGACAATGCAGCAAACCGTTCATGCCGAACAAAGCGCGATCAGCCACGCCTGGTTGAGTGGTGAAAAAGCGCTTGCAGCCATCACCGTTAACTACACGCCTTGTGGTCACTGCCGTCAGTTTATGAATGAACTGAACAGCGGTCTGGATCTGCGTATTCATCTGCCGGGCCGCGAGGCACACGCGCTGCGTGACTATCTGCCAGATGCCTTTGGGCCGAAAGATCTGGAGATTAAAACGCTGCTGATGGACGAACAGGATCACGGCTATGCGCTGACGGGTGATGCGCTTTCTCAGGCAGCGATTGCGGCGGCAAACCGTTCGCACATGCCTTACAGTAAGTCGCCAAGCGGTGTCGCGCTGGAATGTAAAGACGGTCGTATTTTCAGTGGCAGCTACGCTGAAAACGCCGCATTCAACCCGACTCTGCCACCGTTGCAGGGAGCGTTAATTCTGTTGAATCTCAAGGGTTATGATTACCCGGATATCCAGCGCGCGGTTCTGGCAGAAAAAGCCGATGCGCCGTTGATTCAGTGGGATGCCACCTCCGCAACGCTGAAAGCTCTCGGCTGTCACAGTATCGACCGAGTGCTTCTCGCTTAA", - "dna_sequence_length": 885, - "functions": [ - "cytidine/deoxycytidine deaminase" - ], - "id": "CDS_2128", - "location": [ - [ - "NC_000913", - 2231844, - "+", - 885 - ] - ], - "md5": "3fe1b6d53a480b1433724a5269d43cac", - "parent_gene": "", - "protein_md5": "cde21cad6c214513fc4fc18792eb9152", - "protein_translation": "MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSATGLDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAISHAWLSGEKALAAITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDYLPDAFGPKDLEIKTLLMDEQDHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECKDGRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDATSATLKALGCHSIDRVLLA", - "protein_translation_length": 294, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "sfiX" - ], - [ - "gene_synonym", - "NP_416649.1" - ], - [ - "gene_synonym", - "b2144" - ], - [ - "gene_synonym", - "yeiF" - ], - [ - "gene_synonym", - "EcoGene:EG12025" - ], - [ - "gene_synonym", - "GI:16130082" - ], - [ - "gene_synonym", - "ASAP:ABE-0007091" - ], - [ - "gene_synonym", - "JW2132" - ], - [ - "gene_synonym", - "ECK2137" - ], - [ - "gene_synonym", - "sanA" - ], - [ - "gene_synonym", - "GeneID:949003" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFY2" - ] - ], - "dna_sequence": "ATGTTAAAGCGCGTGTTCCTCAGCCTGTTAGTCCTGATCGGCTTGCTGCTGTTGACTGTGCTCGGCCTCGATCGCTGGATGAGCTGGAAAACCGCGCCTTATATCTACGACGAATTGCAGGATCTCCCCTACCGCCAGGTCGGTGTGGTGCTCGGAACAGCAAAATATTATCGTACTGGCGTAATTAATCAGTATTATCGCTACCGCATTCAAGGAGCGATTAATGCCTATAACAGCGGTAAGGTAAATTATCTATTACTGAGCGGCGATAACGCATTGCAAAGTTATAATGAGCCGATGACCATGCGCAAAGATTTAATCGCTGCTGGTGTCGACCCATCAGATATTGTTCTCGATTACGCAGGCTTTCGTACGCTGGATTCCATCGTGCGTACACGCAAAGTTTTCGATACTAATGATTTCATTATTATCACCCAACGTTTCCACTGTGAGCGAGCATTATTTATTGCGCTGCATATGGGGATTCAGGCTCAGTGTTATGCCGTACCGTCACCGAAAGATATGCTGTCAGTACGTATTCGTGAATTTGCCGCCCGTTTCGGTGCGCTGGCTGACCTTTATATTTTTAAACGTGAACCGCGTTTTTTAGGGCCGCTGGTCCCTATTCCGGCTATGCACCAGGTACCGGAAGATGCGCAGGGGTATCCCGCCGTCACACCCGAACAGTTACTTGAATTACAAAAGAAACAAGGAAAGTAG", - "dna_sequence_length": 720, - "functions": [ - "DUF218 superfamily vancomycin high temperature exclusion protein" - ], - "id": "CDS_2129", - "location": [ - [ - "NC_000913", - 2232878, - "+", - 720 - ] - ], - "md5": "3e584aea3b31d01d11543895bfb85046", - "parent_gene": "", - "protein_md5": "925db9b4ad38753374cef75e12d06554", - "protein_translation": "MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPYRQVGVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHMGIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPEDAQGYPAVTPEQLLELQKKQGK", - "protein_translation_length": 239, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948983" - ], - [ - "gene_synonym", - "JW5359" - ], - [ - "gene_synonym", - "b2145" - ], - [ - "gene_synonym", - "NP_416650.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007093" - ], - [ - "gene_synonym", - "GI:16130083" - ], - [ - "gene_synonym", - "EcoGene:EG14073" - ], - [ - "gene_synonym", - "ECK2138" - ], - [ - "gene_synonym", - "yeiS" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64536" - ] - ], - "dna_sequence": "ATGGATGTACAGCAGTTTTTTGTCGTTGCCGTTTTTTTCCTTATCCCGATATTTTGTTTCCGCGAAGCATGGAAAGGCTGGCGCGCAGGCGCGATTGATAAACGGGTTAAAAATGCACCGGAACCGGTGTATGTCTGGCGAGCAAAAAATCCCGGACTCTTTTTCGCTTATATGGTGGCATATATCGGCTTCGGAATTTTATCTATCGGCATGATTGTTTATCTTATTTTCTATCGTTAA", - "dna_sequence_length": 240, - "functions": [ - "DUF2542 family protein" - ], - "id": "CDS_2130", - "location": [ - [ - "NC_000913", - 2233600, - "+", - 240 - ] - ], - "md5": "c28399ca0f7a3960090ad9206ede3589", - "parent_gene": "", - "protein_md5": "7927ac49e2e617e4dd7eeba15d52bc70", - "protein_translation": "MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVYVWRAKNPGLFFAYMVAYIGFGILSIGMIVYLIFYR", - "protein_translation_length": 79, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76440" - ], - [ - "gene_synonym", - "GeneID:949049" - ], - [ - "gene_synonym", - "EcoGene:EG14074" - ], - [ - "gene_synonym", - "GI:16130084" - ], - [ - "gene_synonym", - "b2146" - ], - [ - "gene_synonym", - "NP_416651.1" - ], - [ - "gene_synonym", - "preB" - ], - [ - "gene_synonym", - "ASAP:ABE-0007096" - ], - [ - "gene_synonym", - "JW2133" - ], - [ - "gene_synonym", - "dpdA" - ], - [ - "gene_synonym", - "yeiT" - ], - [ - "gene_synonym", - "preT" - ], - [ - "gene_synonym", - "ECK2139" - ] - ], - "dna_sequence": "ATGCCGCAACAAAATTATCTGGATGAACTCACTCCGGCTTTTACGTCTTTACTGGCGATTAAAGAAGCCTCTCGCTGTTTATTATGTCACGACGCTCCCTGTAGTCAGGCTTGCCCGGCACAGACCGATCCGGGGAAATTTATTCGCTCAATCTACTTTCGTAATTTTAAAGGCGCTGCCGAGACAATTCGCGAAAATAATGCCCTCGGTGCCGTTTGTGCCAGAGTGTGCCCGACGGAGAAATTATGCCAAAGCGGTTGTACCCGTGCCGGTGTTGATGCTCCCATTGATATCGGCCGCTTACAGCGTTTTGTTACTGATTTTGAACAACAAACCGGAATGGAAATTTATCAGCCCGGTACTAAAACGCTCGGCAAAGTCGCGATTATTGGCGCAGGTCCTGCCGGATTGCAGGCCAGTGTGACACTGACAAACCAGGGTTATGACGTCACGATTTATGAGAAAGAAGCGCACCCCGGTGGCTGGTTGCGTAACGGTATTCCGCAATTCCGGTTACCGCAATCAGTGCTGGATGCAGAGATCGCCCGTATTGAAAAAATGGGCGTGACCATTAAGTGCAACAACGAAGTCGGTAACACACTCACCCTTGAGCAGCTGAAAGCAGAAAACCGCGCGGTACTGGTCACCGTGGGGTTATCAAGCGGTTCCGGGCTACCGCTGTTTGAGCATAGTGACGTTGAGATTGCCGTCGACTTCTTGCAACGTGCACGACAGGCGCAAGGCGATATCAGCATTCCACAAAGCGCATTAATTATCGGCGGCGGTGATGTCGCGATGGACGTAGCCAGCACGCTGAAAGTTCTCGGCTGTCAGGCGGTAACTTGCGTAGCGCGTGAAGAGTTAGATGAGTTTCCGGCAAGCGAAAAAGAGTTTACCAGCGCCCGGGAGCTGGGCGTTTCGATCATCGATGGATTCACGCCAGTAGCCGTGGAAGGCAATAAAGTCACGTTTAAGCATGTACGGTTATCGGGCGAACTGACGATGGCGGCAGATAAAATTATTCTCGCCGTCGGTCAGCATGCCAGACTAGATGCCTTTGCGGAGTTAGAGCCGCAGCGTAACACCATCAAAACACAAAATTACCAGACCCGCGACCCGCAAGTCTTTGCTGCTGGCGATATTGTTGAGGGTGACAAAACCGTGGTCTATGCCGTGAAAACCGGGAAAGAAGCCGCCGAGGCGATTCATCACTATTTAGAGGGAGCTTGCTCATGTTAA", 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], - [ - "gene_synonym", - "yeiA" - ], - [ - "gene_synonym", - "EcoGene:EG11289" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25889" - ], - [ - "gene_synonym", - "JW2134" - ], - [ - "gene_synonym", - "GI:90111398" - ], - [ - "gene_synonym", - "GeneID:949037" - ], - [ - "gene_synonym", - "NP_416652.4" - ] - ], - "dna_sequence": "ATGTTAACGAAAGATCTTTCGATTACTTTTTGCGGCGTGAAGTTTCCCAACCCGTTCTGCCTCTCTTCTTCGCCGGTAGGCAACTGCTATGAGATGTGTGCCAAAGCCTACGACACAGGTTGGGGCGGTGTGGTGTTTAAAACGATCGGCTTTTTTATCGCCAACGAAGTCTCGCCGCGTTTTGATCATCTGGTGAAAGAAGATACCGGTTTTATCGGCTTCAAAAATATGGAGCAGATTGCTGAACATCCGTTGGAAGAGAATCTGGCCGCCCTGCGTCGGCTGAAGGAAGATTACCCGGACAAAGTATTGATCGCTTCGATCATGGGGGAAAATGAGCAGCAATGGGAGGAGCTGGCGCGCCTGGTGCAAGAAGCTGGCGCGGATATGATCGAGTGTAACTTCTCCTGTCCGCAAATGACTTCTCATGCGATGGGTAGCGATGTCGGGCAAAGCCCGGAGCTGGTAGAAAAATATTGTCGGGCAGTGAAACGGGGTTCCACGCTGCCAATGCTGGCGAAGATGACGCCGAATATCGGTGATATGTGCGAAGTGGCGCTGGCGGCGAAGCGCGGCGGCGCAGATGGCATTGCGGCGATTAACACCGTTAAATCCATCACCAATATCGATCTTAATCAGAAAATCGGTATGCCGATCGTTAACGGAAAATCGAGTATTTCCGGATATTCCGGTAAAGCGGTAAAACCGATCGCCCTGCGCTTCATTCAGCAAATGCGCACCCATCCAGAACTGCGCGATTTCCCAATCAGCGGTATCGGCGGCATTGAAACCTGGGAGGATGCGGCTGAGTTTTTATTGCTCGGCGCAGCAACGTTACAGGTGACCACCGGCATCATGCAGTACGGGTATCGGATAGTGGAAGATATGGCAAGCGGGTTGTCGCATTATCTCGCCGATCAGGGATTTGATTCGCTGCAGGAGATGGTAGGTCTGGCGAATAACAATATTGTCCCGGCGGAAGATTTAGACCGCAGTTATATTGTCTATCCCCGTATCAATCTTGATAAATGTGTTGGCTGTGGACGCTGTTATATTTCCTGTTACGACGGCGGTCACCAGGCGATGGAATGGAGCGAGAAAACCCGCACACCGCATTGTAATACCGAGAAATGTGTGGGTTGTCTGCTTTGTGGTCACGTCTGCCCGGTGGGTTGTATTGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAA", - "dna_sequence_length": 1236, - "functions": [ - "dihydropyrimidine dehydrogenase, NADH-dependent, subunit C" - ], - "id": "CDS_2132", - "location": [ - [ - "NC_000913", - 2235265, - "+", - 1236 - ] - ], - "md5": "475ba696e0c5caf8c72b9d2bf8a52442", - "parent_gene": "", - "protein_md5": "d688e00df61ce62d9a13c9976dc2a73d", - "protein_translation": "MLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGENEQQWEELARLVQEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKMTPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVKPIALRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFDSLQEMVGLANNNIVPAEDLDRSYIVYPRINLDKCVGCGRCYISCYDGGHQAMEWSEKTRTPHCNTEKCVGCLLCGHVCPVGCIELGEVKFKKGEKEHPVTL", - "protein_translation_length": 411, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "mglC" - ], - [ - "gene_synonym", - "b2148" - ], - [ - "gene_synonym", - "ECK2141" - ], - [ - "gene_synonym", - "GI:16130086" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23200" - ], - [ - "gene_synonym", - "mglP" - ], - [ - "gene_synonym", - "ASAP:ABE-0007101" - ], - [ - "gene_synonym", - "JW2135" - ], - [ - "gene_synonym", - "GeneID:949039" - ], - [ - "gene_synonym", - "NP_416653.1" - ], - [ - "gene_synonym", - "EcoGene:EG10594" - ] - ], - "dna_sequence": "ATGAGTGCGTTAAATAAGAAAAGTTTTCTTACTTACCTGAAAGAGGGCGGTATTTACGTCGTTCTTTTAGTTTTGCTGGCGATTATTATTTTCCAGGACCCAACATTTTTAAGTCTGTTGAACTTAAGTAATATTCTCACCCAGTCATCGGTGCGTATTATTATCGCGCTCGGTGTGGCAGGGTTAATTGTCACCCAGGGGACCGATCTTTCTGCTGGTCGTCAGGTAGGGCTGGCGGCAGTGGTGGCTGCGACATTATTGCAGTCCATGGATAACGCCAACAAAGTGTTCCCGGAAATGGCGACGATGCCGATTGCGCTGGTTATTCTGATTGTCTGTGCCATTGGTGCGGTGATCGGTTTGATCAACGGTCTGATTATCGCTTATCTCAACGTGACGCCGTTCATTACCACGCTCGGCACGATGATCATCGTCTATGGCATCAACTCGCTCTATTACGACTTTGTCGGGGCGTCGCCAATTTCTGGTTTTGACAGTGGCTTCTCTACCTTTGCTCAGGGCTTTGTCGCGCTGGGGAGTTTCCGTCTCTCTTACATCACCTTCTACGCGTTGATTGCGGTGGCGTTCGTCTGGGTGTTGTGGAACAAAACCCGCTTCGGTAAGAACATTTTTGCCATTGGCGGTAACCCGGAAGCGGCAAAAGTATCTGGTGTCAACGTCGGCCTGAACCTGCTGATGATCTACGCGTTGTCTGGCGTGTTCTATGCCTTTGGCGGGATGTTAGAAGCCGGACGTATCGGCTCTGCCACCAACAACCTCGGCTTTATGTATGAGCTGGATGCTATCGCGGCGTGCGTGGTAGGCGGTGTATCGTTCAGCGGCGGTGTGGGGACGGTGATTGGCGTGGTGACCGGGGTAATTATTTTTACCGTCATCAACTATGGCCTGACGTATATCGGCGTAAACCCATACTGGCAGTACATCATCAAAGGGGCGATTATTATCTTCGCCGTAGCGCTGGATTCACTGAAATACGCGCGTAAGAAATGA", - "dna_sequence_length": 1011, - "functions": [ - "methyl-galactoside transporter subunit" - ], - "id": "CDS_2133", - "location": [ - [ - "NC_000913", - 2237753, - "-", - 1011 - ] - ], - "md5": "88824fd23960b5378e90626b00c0fac1", - "parent_gene": "", - "protein_md5": "7456c9822d0da0da2bb0da9cdbe5e842", - "protein_translation": "MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSNILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMATMPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASPISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKVSGVNVGLNLLMIYALSGVFYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPYWQYIIKGAIIIFAVALDSLKYARKK", - "protein_translation_length": 336, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "mglA" - ], - [ - "gene_synonym", - "b2149" - ], - [ - "gene_synonym", - "GI:16130087" - ], - [ - "gene_synonym", - "NP_416654.1" - ], - [ - "gene_synonym", - "mglP" - ], - [ - "gene_synonym", - "GeneID:949036" - ], - [ - "gene_synonym", - "ASAP:ABE-0007103" - ], - [ - "gene_synonym", - "JW2136" - ], - [ - "gene_synonym", - "EcoGene:EG10592" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAG8" - ], - [ - "gene_synonym", - "ECK2142" - ] - ], - "dna_sequence": "ATGGTCAGCTCAACGACTCCGTCCTCCGGGGAATACTTGTTGGAAATGAGCGGTATCAACAAGTCCTTTCCTGGTGTTAAGGCACTTGATAACGTTAATTTAAAAGTCCGGCCACATTCTATCCATGCATTAATGGGGGAAAACGGTGCAGGAAAATCGACATTATTAAAATGCCTGTTTGGTATTTATCAAAAAGACTCCGGCACCATTTTATTCCAGGGTAAAGAGATCGATTTCCATTCTGCAAAAGAAGCCCTGGAAAATGGTATTTCGATGGTACACCAGGAGTTAAACCTGGTATTACAACGTTCGGTGATGGATAACATGTGGCTGGGGCGATATCCCACCAAAGGCATGTTTGTCGATCAGGACAAAATGTACCGCGAAACCAAAGCGATTTTTGACGAACTGGATATTGATATCGATCCGCGTGCGCGCGTCGGCACATTATCCGTTTCGCAAATGCAGATGATCGAAATCGCCAAAGCGTTTTCCTATAACGCGAAAATTGTGATTATGGATGAACCGACTTCTTCGTTAACCGAAAAAGAGGTCAATCATCTGTTCACTATTATTCGTAAATTAAAAGAGCGCGGCTGCGGTATTGTTTATATCTCGCATAAAATGGAAGAAATCTTCCAGTTATGTGATGAAGTTACCGTATTGCGCGACGGTCAGTGGATCGCCACCGAACCGCTGGCAGGACTGACGATGGACAAGATCATCGCCATGATGGTTGGGCGTTCTCTTAACCAGCGTTTCCCTGACAAAGAAAACAAACCGGGCGAAGTCATCCTCGAGGTACGTAACCTGACGTCACTGCGCCAGCCGTCGATTCGCGATGTCTCGTTTGATCTGCATAAAGGGGAGATCCTCGGTATTGCCGGTCTGGTGGGGGCGAAACGTACCGATATTGTTGAGACGTTATTTGGTATTCGCGAGAAATCGGCTGGCACCATAACGTTGCACGGCAAACAGATCAATAACCATAATGCCAACGAAGCCATAAACCATGGATTTGCACTGGTAACTGAGGAGCGCCGCTCAACGGGAATTTATGCCTATCTGGATATTGGTTTTAACTCGTTAATTTCCAATATTCGCAACTACAAAAATAAAGTTGGTTTACTGGATAACTCGCGGATGAAAAGCGATACCCAGTGGGTGATTGATTCGATGCGGGTAAAAACGCCGGGTCATCGGACGCAAATTGGTTCGCTCTCCGGTGGTAATCAGCAAAAGGTGATTATTGGTCGCTGGCTACTAACGCAACCAGAAATATTAATGCTCGATGAACCGACGCGCGGTATTGATGTCGGGGCGAAGTTTGAAATTTATCAGTTAATTGCCGAACTGGCGAAGAAAGGCAAGGGGATTATTATTATCTCCTCTGAAATGCCTGAGTTGTTAGGGATAACAGACCGTATTCTGGTCATGAGCAATGGTCTCGTTTCCGGAATTGTCGATACAAAAACAACAACGCAAAACGAAATTCTGCGTCTTGCGTCTTTGCACCTTTAA", - "dna_sequence_length": 1521, - "functions": [ - "methyl-galactoside ABC transporter ATPase" - ], - "id": "CDS_2134", - "location": [ - [ - "NC_000913", - 2239289, - "-", - 1521 - ] - ], - "md5": "793786331ff1ceaf7a37a003191b4db7", - "parent_gene": "", - "protein_md5": "ad359524d743b331868d5956ec1fd6d6", - "protein_translation": "MVSSTTPSSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEVTVLRDGQWIATEPLAGLTMDKIIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKQINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKGKGIIIISSEMPELLGITDRILVMSNGLVSGIVDTKTTTQNEILRLASLHL", - "protein_translation_length": 506, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "mglB" - ], - [ - "gene_synonym", - "b2150" - ], - [ - "gene_synonym", - "GI:16130088" - ], - [ - "gene_synonym", - "NP_416655.1" - ], - [ - "gene_synonym", - "GeneID:949041" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEE5" - ], - [ - "gene_synonym", - "JW2137" - ], - [ - "gene_synonym", - "EcoGene:EG10593" - ], - [ - "gene_synonym", - "ASAP:ABE-0007108" - ], - [ - "gene_synonym", - "ECK2143" - ] - ], - "dna_sequence": "ATGAATAAGAAGGTGTTAACCCTGTCTGCTGTGATGGCCAGCATGTTATTCGGTGCCGCTGCACACGCTGCTGATACTCGCATTGGTGTAACAATCTATAAGTACGACGATAACTTTATGTCTGTAGTGCGCAAGGCTATTGAGCAAGATGCGAAAGCCGCGCCAGATGTTCAGCTGCTGATGAATGATTCTCAGAATGACCAGTCCAAGCAGAACGATCAGATCGACGTATTGCTGGCGAAAGGGGTGAAGGCACTGGCAATCAACCTGGTTGACCCGGCAGCTGCGGGTACGGTGATTGAGAAAGCGCGTGGGCAAAACGTGCCGGTGGTTTTCTTCAACAAAGAACCGTCTCGTAAGGCGCTGGATAGCTACGACAAAGCCTACTACGTTGGCACTGACTCCAAAGAGTCCGGCATTATTCAAGGCGATTTGATTGCTAAACACTGGGCGGCGAATCAGGGTTGGGATCTGAACAAAGACGGTCAGATTCAGTTCGTACTGCTGAAAGGTGAACCGGGCCATCCGGATGCAGAAGCACGTACCACTTACGTGATTAAAGAATTGAACGATAAAGGCATCAAAACTGAACAGTTACAGTTAGATACCGCAATGTGGGACACCGCTCAGGCGAAAGATAAGATGGACGCCTGGCTGTCTGGCCCGAACGCCAACAAAATCGAAGTGGTTATCGCCAACAACGATGCGATGGCAATGGGCGCGGTTGAAGCGCTGAAAGCACACAACAAGTCCAGCATTCCGGTGTTTGGCGTCGATGCGCTGCCAGAAGCGCTGGCGCTGGTGAAATCCGGTGCACTGGCGGGCACCGTACTGAACGATGCTAACAACCAGGCGAAAGCGACCTTTGATCTGGCGAAAAACCTGGCCGATGGTAAAGGTGCGGCTGATGGCACCAACTGGAAAATCGACAACAAAGTGGTCCGCGTACCTTATGTTGGCGTAGATAAAGACAACCTGGCTGAATTCAGCAAGAAATAA", - "dna_sequence_length": 999, - "functions": [ - "methyl-galactoside transporter subunit" - ], - "id": "CDS_2135", - "location": [ - [ - "NC_000913", - 2240348, - "-", - 999 - ] - ], - "md5": "c886fc6233f6c9fc80c092bf81fa7b09", - "parent_gene": "", - "protein_md5": "25039a1482469b5f2e4756711abe51d9", - "protein_translation": "MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGALAGTVLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPYVGVDKDNLAEFSKK", - "protein_translation_length": 332, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2151" - ], - [ - "gene_synonym", - "ECK2144" - ], - [ - "gene_synonym", - "mglD" - ], - [ - "gene_synonym", - "GI:16130089" - ], - [ - "gene_synonym", - "galS" - ], - [ - "gene_synonym", - "GeneID:949043" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25748" - ], - [ - "gene_synonym", - "ASAP:ABE-0007110" - ], - [ - "gene_synonym", - "JW2138" - ], - [ - "gene_synonym", - "EcoGene:EG10365" - ], - [ - "gene_synonym", - "NP_416656.1" - ] - ], - "dna_sequence": "ATGATCACCATTCGTGATGTAGCGCGTCAGGCTGGCGTCTCTGTGGCAACGGTTTCCCGGGTGCTCAATAACAGCACGCTGGTCAGTGCCGACACGCGTGAAGCAGTAATGAAAGCCGTGAGTGAGCTGGATTATCGGCCAAACGCCAATGCCCAGGCGCTGGCAACTCAGGTTAGCGACACCATTGGCGTGGTGGTGATGGACGTTTCTGATGCGTTTTTCGGCGCGCTGGTAAAAGCGGTGGATCTGGTCGCTCAGCAGCATCAGAAATACGTGCTAATCGGCAATAGCTATCATGAAGCGGAAAAAGAGCGTCACGCCATTGAGGTGTTAATTCGCCAGCGTTGTAATGCGTTGATTGTTCACTCAAAAGCATTGAGTGACGATGAACTGGCGCAATTTATGGATAACATTCCCGGTATGGTGTTAATCAACCGCGTTGTGCCGGGGTACGCCCATCGTTGCGTTTGCCTGGATAATCTCAGCGGTGCCCGAATGGCGACGCGCATGTTGCTGAATAACGGTCATCAACGTATTGGTTATCTTTCTTCCAGCCACGGCATTGAAGATGACGCCATGCGTAAAGCAGGCTGGATGAGTGCGTTGAAAGAGCAGGATATTATTCCGCCGGAAAGCTGGATTGGCGCTGGTACGCCGGACATGCCGGGCGGTGAGGCGGCGATGGTTGAACTGCTGGGGCGCAATCTACAACTTACCGCTGTATTTGCTTATAACGACAATATGGCCGCTGGCGCACTGACAGCATTAAAAGATAATGGCATTGCGATTCCGTTACATCTCTCAATCATCGGTTTCGATGATATTCCCATCGCCCGTTACACCGACCCGCAATTAACGACCGTGCGTTATCCCATTGCTTCAATGGCGAAATTAGCCACCGAACTGGCCTTGCAGGGGGCAGCAGGCAATATTGATCCTCGTGCCAGCCACTGTTTTATGCCGACGTTAGTGCGTCGCCATTCTGTCGCAACACGCCAGAATGCGGCGGCGATCACTAACTCAACAAATCAGGCGATGTAA", - "dna_sequence_length": 1041, - "functions": [ - "galactose- and fucose-inducible galactose regulon transcriptional isorepressor", - "mgl operon transcriptional repressor", - "autorepressor" - ], - "id": "CDS_2136", - "location": [ - [ - "NC_000913", - 2241668, - "-", - 1041 - ] - ], - "md5": "ebcc05c6e2e58b04f6a308870352dbbf", - "parent_gene": "", - "protein_md5": "4042f243e2a7c9208bd3e6cfe340be7b", - "protein_translation": "MITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELDYRPNANAQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAEKERHAIEVLIRQRCNALIVHSKALSDDELAQFMDNIPGMVLINRVVPGYAHRCVCLDNLSGARMATRMLLNNGHQRIGYLSSSHGIEDDAMRKAGWMSALKEQDIIPPESWIGAGTPDMPGGEAAMVELLGRNLQLTAVFAYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIPIARYTDPQLTTVRYPIASMAKLATELALQGAAGNIDPRASHCFMPTLVRRHSVATRQNAAAITNSTNQAM", - "protein_translation_length": 346, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2152" - ], - [ - "gene_synonym", - "ECK2145" - ], - [ - "gene_synonym", - "EcoGene:EG11290" - ], - [ - "gene_synonym", - "GeneID:949044" - ], - [ - "gene_synonym", - "GI:16130090" - ], - [ - "gene_synonym", - "NP_416657.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007115" - ], - [ - "gene_synonym", - "JW2139" - ], - [ - "gene_synonym", - "yeiB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25747" - ] - ], - "dna_sequence": "ATGGAGCGCAACGTCACGCTCGATTTTGTTCGCGGCGTCGCCATTCTGGGGATCCTGCTATTAAACATCAGCGCCTTTGGGCTACCAAAGGCGGCTTATCTCAATCCCGCCTGGTACGGTGCTATTACGCCGCGGGATGCATGGACTTGGGCATTTCTTGATCTCATCGGCCAGGTGAAATTCCTCACGCTTTTTGCGCTACTGTTTGGTGCGGGCCTGCAAATGTTGCTGCCCCGTGGCAGACGCTGGATCCAGTCGCGGTTAACGCTGTTAGTCTTGTTGGGCTTTATTCACGGTTTATTGTTCTGGGACGGCGATATTTTGCTGGCTTACGGGCTGGTGGGCTTAATCTGCTGGCGGCTGGTGCGCGATGCGCCATCGGTAAAAAGCCTGTTTAATACAGGCGTCATGCTTTATCTGGTGGGGCTTGGCGTTTTGCTGTTATTGGGGCTGATTTCCGACAGCCAGACCAGCCGCGCCTGGACGCCGGATGCATCGGCTATTTTGTATGAAAAATACTGGAAGCTTCACGGCGGCGTTGAAGCGATCAGTAATCGTGCCGATGGTGTTGGCAACAGTTTACTGGCACTGGGCGCACAGTATGGCTGGCAACTGGCAGGGATGATGCTCATTGGTGCGGCGCTGATGCGCAGCGGCTGGCTGAAAGGGCAGTTCAGCTTACGTCACTATCGTCGTACTGGTTTTGTGCTGGTGGCGATTGGGGTGACCATTAACCTTCCTGCCATCGCCCTGCAATGGCAGCTGGACTGGGCGTATCGCTGGTGTGCCTTCTTACTTCAAATGCCGCGGGAACTGAGTGCGCCGTTTCAGGCGATTGGCTATGCGTCGCTGTTTTATGGCTTCTGGCCGCAATTGAGCCGCTTTAAGCTGGTGCTTGCGATCGCCTGCGTCGGACGGATGGCGCTGACCAACTATCTATTGCAAACGCTGATTTGTACCACGCTTTTTTACCACCTCGGTTTGTTTATGCATTTTGACCGCCTGGAGCTGCTGGCGTTTGTTATTCCGGTATGGCTGGCGAATATCCTCTTCTCTGTTATCTGGCTGCGTTACTTCCGCCAGGGGCCGGTGGAATGGCTCTGGCGTCAGTTAACTTTGCGTGCTGCCGGACCGGCAATATCTAAAACATCAAGATAA", - "dna_sequence_length": 1158, - "functions": [ - "DUF418 family putative inner membrane protein" - ], - "id": "CDS_2137", - "location": [ - [ - "NC_000913", - 2242967, - "-", - 1158 - ] - ], - "md5": "805cc698e66694e704aa938ba056892b", - "parent_gene": "", - "protein_md5": "4291f1df8f9d0dc081231e46a74cf414", - "protein_translation": "MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITPRDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLGLFMHFDRLELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR", - "protein_translation_length": 385, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2153" - ], - [ - "gene_synonym", - "ECK2146" - ], - [ - "gene_synonym", - "EcoGene:EG11375" - ], - [ - "gene_synonym", - "JW2140" - ], - [ - "gene_synonym", - "GI:16130091" - ], - [ - "gene_synonym", - "GeneID:949040" - ], - [ - "gene_synonym", - "folE" - ], - [ - "gene_synonym", - "NP_416658.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007117" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6T5" - ] - ], - "dna_sequence": "ATGCCATCACTCAGTAAAGAAGCGGCCCTGGTTCATGAAGCGTTAGTTGCGCGAGGACTGGAAACACCGCTGCGCCCGCCCGTGCATGAAATGGATAACGAAACGCGCAAAAGCCTTATTGCTGGTCATATGACCGAAATCATGCAGCTGCTGAATCTCGACCTGGCTGATGACAGTTTGATGGAAACGCCGCATCGCATCGCTAAAATGTATGTCGATGAAATTTTCTCCGGTCTGGATTACGCCAATTTCCCGAAAATCACCCTCATTGAAAACAAAATGAAGGTCGATGAAATGGTCACCGTGCGCGATATCACTCTGACCAGCACCTGTGAACACCATTTTGTTACCATCGATGGCAAAGCGACGGTGGCCTATATCCCGAAAGATTCGGTGATCGGTCTGTCAAAAATTAACCGCATTGTGCAGTTCTTTGCCCAGCGTCCGCAGGTGCAGGAACGTCTGACGCAGCAAATTCTTATTGCGCTACAAACGCTGCTGGGCACCAATAACGTGGCTGTCTCGATCGACGCGGTGCATTACTGCGTGAAGGCGCGTGGCATCCGCGATGCAACCAGTGCCACGACAACGACCTCTCTTGGTGGATTGTTCAAATCCAGTCAGAATACGCGCCACGAGTTTCTGCGCGCTGTGCGTCATCACAACTGA", - "dna_sequence_length": 669, - "functions": [ - "GTP cyclohydrolase I" - ], - "id": "CDS_2138", - "location": [ - [ - "NC_000913", - 2243652, - "-", - 669 - ] - ], - "md5": "ab4f70f71144a02d1b8f7c419c262afe", - "parent_gene": "", - "protein_md5": "2c242910cb3cdf4137502dac1ebc7215", - "protein_translation": "MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHMTEIMQLLNLDLADDSLMETPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILIALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAVRHHN", - "protein_translation_length": 222, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2147" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33018" - ], - [ - "gene_synonym", - "b2154" - ], - [ - "gene_synonym", - "JW2141" - ], - [ - "gene_synonym", - "yeiG" - ], - [ - "gene_synonym", - "GI:16130092" - ], - [ - "gene_synonym", - "EcoGene:EG12026" - ], - [ - "gene_synonym", - "ASAP:ABE-0007124" - ], - [ - "gene_synonym", - "NP_416659.1" - ], - [ - "gene_synonym", - "GeneID:949045" - ] - ], - "dna_sequence": "ATGGAAATGCTCGAAGAGCACCGCTGTTTTGAAGGCTGGCAGCAACGCTGGCGACACGACTCCAGTACCTTAAACTGCCCGATGACGTTCAGTATCTTTCTCCCTCCACCTCGTGATCACACTCCGCCACCAGTGCTGTACTGGCTTTCCGGATTAACCTGCAATGACGAGAACTTCACCACCAAGGCGGGTGCCCAGCGGGTAGCGGCGGAACTGGGGATTGTACTGGTGATGCCAGACACCAGCCCGCGCGGCGAAAAGGTTGCCAACGACGATGGCTACGATTTAGGCCAGGGCGCAGGCTTTTATCTTAATGCCACGCAACCGCCGTGGGCGACGCATTACCGGATGTATGATTATCTGCGCGATGAATTACCGGCGCTGGTTCAGTCGCAATTTAATGTCAGCGACCGCTGCGCCATTAGCGGTCACTCAATGGGTGGTCACGGTGCGCTGATTATGGCGCTGAAAAATCCGGGTAAATACACCAGCGTTTCGGCCTTTGCGCCAATTGTGAATCCGTGCAGCGTCCCGTGGGGAATCAAAGCGTTTAGCAGCTATTTAGGTGAGGACAAAAATGCATGGCTGGAATGGGACAGTTGCGCACTGATGTATGCCAGTAACGCGCAGGATGCGATCCCGACGCTTATCGATCAGGGCGATAATGATCAGTTTCTTGCCGACCAGTTGCAACCTGCGGTACTGGCAGAAGCCGCGCGCCAGAAAGCGTGGCCGATGACGCTGCGTATTCAGCCGGGATATGATCACAGTTACTACTTCATCGCCTCTTTTATAGAGGATCACCTGCGCTTCCATGCGCAGTATTTACTGAAGTGA", - "dna_sequence_length": 837, - "functions": [ - "S-formylglutathione hydrolase" - ], - "id": "CDS_2139", - "location": [ - [ - "NC_000913", - 2243910, - "+", - 837 - ] - ], - "md5": "f3d495c43f629f764150e2f36114d4af", - "parent_gene": "", - "protein_md5": "a96d9a8dfdfdc1b536f250efd6b696a1", - "protein_translation": "MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPPVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVANDDGYDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYLLK", - "protein_translation_length": 278, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2155" - ], - [ - "gene_synonym", - "JW2142" - ], - [ - "gene_synonym", - "GI:16130093" - ], - [ - "gene_synonym", - "GeneID:949042" - ], - [ - "gene_synonym", - "ECK2148" - ], - [ - "gene_synonym", - "ASAP:ABE-0007126" - ], - [ - "gene_synonym", - "cir" - ], - [ - "gene_synonym", - "cirA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17315" - ], - [ - "gene_synonym", - "feuA" - ], - [ - "gene_synonym", - "EcoGene:EG10155" - ], - [ - "gene_synonym", - "NP_416660.1" - ] - ], - "dna_sequence": "ATGTTTAGGTTGAACCCTTTCGTACGGGTCGGGCTGTGTTTGTCCGCTATTTCTTGTGCATGGCCTGTGTTAGCGGTCGATGATGATGGCGAAACGATGGTTGTCACTGCATCTTCCGTGGAACAAAATCTTAAAGATGCACCTGCCAGTATCAGCGTCATTACCCAGGAAGACCTGCAGCGAAAACCGGTACAGAATCTGAAGGATGTCCTCAAAGAAGTGCCTGGCGTACAACTGACGAACGAAGGGGATAACCGTAAGGGCGTTAGTATTCGTGGTCTGGACAGCAGCTATACCCTGATTCTCGTCGACGGTAAACGCGTGAACTCCCGCAATGCCGTCTTCCGCCACAATGATTTCGATCTGAACTGGATCCCGGTCGATTCCATCGAACGTATTGAAGTGGTCCGTGGCCCGATGTCGTCGCTGTACGGTTCCGATGCGCTCGGCGGTGTAGTGAATATCATCACCAAAAAAATCGGTCAGAAATGGTCGGGTACCGTTACCGTCGATACCACCATTCAGGAACATCGCGATCGCGGTGACACCTATAACGGTCAGTTCTTTACCAGTGGACCATTAATTGATGGTGTGCTGGGAATGAAAGCTTACGGCAGCCTGGCAAAACGTGAAAAGGATGACCCGCAAAACTCAACGACCACCGATACCGGAGAAACGCCGCGTATTGAAGGATTCTCCAGCCGCGACGGCAATGTCGAATTTGCCTGGACACCGAATCAAAATCACGATTTTACTGCCGGATACGGTTTCGACCGTCAGGATCGTGATTCCGACTCGCTGGACAAAAACCGCCTGGAACGCCAGAACTACTCCGTCAGCCATAATGGGCGTTGGGATTACGGCACCAGCGAACTGAAATACTACGGTGAGAAAGTCGAGAACAAAAACCCTGGCAACAGCAGCCCGATAACTTCCGAAAGCAATACGGTCGACGGCAAATACACGTTGCCGCTGACGGCGATTAATCAGTTTCTCACGGTTGGCGGTGAATGGCGTCACGACAAACTTAGCGATGCGGTGAACCTGACCGGGGGAACCAGCTCCAAAACGTCTGCCAGCCAGTACGCGCTGTTTGTGGAAGATGAATGGCGGATCTTCGAGCCGCTGGCGCTGACGACCGGCGTGCGTATGGACGATCACGAAACCTACGGTGAACACTGGAGTCCGCGTGCCTACCTGGTTTATAACGCCACCGACACCGTAACGGTGAAAGGGGGCTGGGCGACGGCATTTAAAGCACCTTCTCTGTTGCAACTTAGCCCTGACTGGACGAGCAATTCCTGCCGTGGCGCATGTAAGATTGTGGGTAGCCCGGATCTGAAACCAGAAACCAGCGAAAGTTGGGAGCTGGGGCTTTACTACATGGGTGAAGAAGGCTGGCTGGAAGGGGTTGAATCCAGCGTTACCGTTTTCCGTAACGATGTGAAAGATCGTATCAGCATCAGCCGTACGTCTGACGTCAACGCTGCACCGGGCTACCAAAACTTTGTTGGTTTTGAGACGGGCGCTAACGGACGGCGCATACCGGTATTTAGCTACTACAACGTTAACAAAGCTCGTATTCAGGGCGTGGAAACCGAACTGAAAATTCCGTTCAACGATGAATGGAAACTGTCGATCAACTACACCTACAACGATGGTCGTGATGTCAGCAACGGCGAAAACAAACCGCTATCCGATCTGCCGTTCCATACTGCTAACGGTACGCTGGACTGGAAACCGCTGGCGCTGGAAGACTGGTCATTCTATGTTTCTGGGCACTATACCGGGCAGAAACGCGCCGACAGCGCGACGGCTAAAACACCGGGCGGTTATACCATCTGGAATACCGGCGCGGCCTGGCAGGTGACTAAAGACGTCAAACTGCGCGCAGGCGTGCTGAACCTTGGCGACAAGGATCTCAGTCGTGACGACTACAGCTATAACGAAGACGGACGTCGTTACTTTATGGCAGTGGATTATCGCTTCTGA", - "dna_sequence_length": 1992, - "functions": [ - "colicin IA outer membrane receptor and translocator", - "ferric iron-catecholate transporter" - ], - "id": "CDS_2140", - "location": [ - [ - "NC_000913", - 2246769, - "-", - 1992 - ] - ], - "md5": "6eac0d6cce18a6079ab3baac179b24f3", - "parent_gene": "", - "protein_md5": "92a43109126430852293811a8156119c", - "protein_translation": "MFRLNPFVRVGLCLSAISCAWPVLAVDDDGETMVVTASSVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYTLILVDGKRVNSRNAVFRHNDFDLNWIPVDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTVDTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTDTGETPRIEGFSSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSDSLDKNRLERQNYSVSHNGRWDYGTSELKYYGEKVENKNPGNSSPITSESNTVDGKYTLPLTAINQFLTVGGEWRHDKLSDAVNLTGGTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGEHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKIVGSPDLKPETSESWELGLYYMGEEGWLEGVESSVTVFRNDVKDRISISRTSDVNAAPGYQNFVGFETGANGRRIPVFSYYNVNKARIQGVETELKIPFNDEWKLSINYTYNDGRDVSNGENKPLSDLPFHTANGTLDWKPLALEDWSFYVSGHYTGQKRADSATAKTPGGYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLSRDDYSYNEDGRRYFMAVDYRF", - "protein_translation_length": 663, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cadR" - ], - [ - "gene_synonym", - "GI:16130094" - ], - [ - "gene_synonym", - "b2156" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25737" - ], - [ - "gene_synonym", - "JW2143" - ], - [ - "gene_synonym", - "ECK2149" - ], - [ - "gene_synonym", - "ASAP:ABE-0007131" - ], - [ - "gene_synonym", - "EcoGene:EG11337" - ], - [ - "gene_synonym", - "NP_416661.1" - ], - [ - "gene_synonym", - "lysP" - ], - [ - "gene_synonym", - "GeneID:946667" - ] - ], - "dna_sequence": "ATGGTTTCCGAAACTAAAACCACAGAAGCGCCGGGCTTACGCCGTGAATTAAAGGCGCGTCACCTGACGATGATTGCCATTGGCGGTTCCATCGGTACAGGTCTTTTTGTTGCCTCTGGCGCAACGATTTCTCAGGCAGGTCCGGGCGGGGCATTGCTCTCGTATATGCTGATTGGCCTGATGGTTTACTTCCTGATGACCAGTCTCGGTGAACTGGCTGCATATATGCCGGTTTCCGGTTCGTTTGCCACTTACGGTCAGAACTATGTTGAAGAAGGCTTTGGCTTCGCGCTGGGCTGGAACTACTGGTACAACTGGGCGGTGACTATCGCCGTTGACCTGGTTGCAGCTCAGCTGGTCATGAGCTGGTGGTTCCCGGATACACCGGGCTGGATCTGGAGTGCGTTGTTCCTCGGCGTTATCTTCCTGCTGAACTACATCTCAGTTCGTGGCTTTGGTGAAGCGGAATACTGGTTCTCACTGATCAAAGTCACGACAGTTATTGTCTTTATCATCGTTGGCGTGCTGATGATTATCGGTATCTTCAAAGGCGCGCAGCCTGCGGGCTGGAGCAACTGGACAATCGGCGAAGCGCCGTTTGCTGGTGGTTTTGCGGCGATGATCGGCGTAGCTATGATTGTCGGCTTCTCTTTCCAGGGAACCGAGCTGATCGGTATTGCTGCAGGCGAGTCCGAAGATCCGGCGAAAAACATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGATCCTGATTATCAGCCTGATTATTCCGTACACCGATCCGAGCCTGCTGCGTAACGATGTTAAAGACATCAGCGTTAGTCCGTTCACCCTGGTGTTCCAGCACGCGGGTCTGCTCTCTGCGGCGGCGGTGATGAACGCAGTTATTCTGACGGCGGTGCTGTCAGCGGGTAACTCCGGTATGTATGCGTCTACTCGTATGCTGTACACCCTGGCGTGTGACGGTAAAGCGCCGCGCATTTTCGCTAAACTGTCGCGTGGTGGCGTGCCGCGTAATGCGCTGTATGCGACGACGGTGATTGCCGGTCTGTGCTTCCTGACCTCCATGTTTGGCAACCAGACGGTATACCTGTGGCTGCTGAACACCTCCGGGATGACGGGTTTTATCGCCTGGCTGGGGATTGCCATTAGCCACTATCGCTTCCGTCGCGGTTACGTATTGCAGGGACACGACATTAACGATCTGCCGTACCGTTCAGGTTTCTTCCCACTGGGGCCGATCTTCGCATTCATTCTGTGTCTGATTATCACTTTGGGCCAGAACTACGAAGCGTTCCTGAAAGATACTATTGACTGGGGCGGCGTAGCGGCAACGTATATTGGTATCCCGCTGTTCCTGATTATTTGGTTCGGCTACAAGCTGATTAAAGGAACTCACTTCGTACGCTACAGCGAAATGAAGTTCCCGCAGAACGATAAGAAATAA", - "dna_sequence_length": 1470, - "functions": [ - "lysine transporter" - ], - "id": "CDS_2141", - "location": [ - [ - "NC_000913", - 2248532, - "-", - 1470 - ] - ], - "md5": "8d70c1921625b396d79ba33fc3f82d06", - "parent_gene": "", - "protein_md5": "7de515daa8df4b4fba2378e7f496f93d", - "protein_translation": "MVSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFIIVGVLMIIGIFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVLQGHDINDLPYRSGFFPLGPIFAFILCLIITLGQNYEAFLKDTIDWGGVAATYIGIPLFLIIWFGYKLIKGTHFVRYSEMKFPQNDKK", - "protein_translation_length": 489, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2150" - ], - [ - "gene_synonym", - "yeiE" - ], - [ - "gene_synonym", - "GI:16130095" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACR4" - ], - [ - "gene_synonym", - "JW2144" - ], - [ - "gene_synonym", - "EcoGene:EG12105" - ], - [ - "gene_synonym", - "ASAP:ABE-0007138" - ], - [ - "gene_synonym", - "NP_416662.1" - ], - [ - "gene_synonym", - "b2157" - ], - [ - "gene_synonym", - "GeneID:946657" - ] - ], - "dna_sequence": "ATGCACATCACCCTCCGGCAGTTGGAAGTTTTTGCAGAAGTATTGAAAAGTGGATCAACCACCCAGGCGTCGGTGATGCTGGCGTTGTCGCAATCAGCAGTGAGCGCAGCCTTGACCGACCTGGAAGGGCAGCTTGGCGTGCAACTGTTTGATCGCGTGGGGAAAAGACTGGTTGTTAATGAACACGGGCGGCTGCTCTATCCGCGTGCGTTGGCATTGCTTGAACAGGCGGTTGAAATCGAACAACTGTTTCGCGAAGACAACGGCGCGATTCGTATCTATGCCAGTAGTACCATCGGTAACTACATTCTGCCTGCAGTTATCGCCCGTTATCGCCATGATTATCCGCAGTTGCCGATTGAACTTAGCGTTGGGAATAGCCAGGACGTGATGCAAGCGGTGCTGGATTTCCGCGTTGATATTGGCTTTATTGAAGGACCGTGCCACAGCACTGAAATCATTTCTGAACCGTGGCTGGAAGACGAGCTGGTGGTTTTCGCCGCGCCGACTTCGCCGTTGGCCCGTGGTCCGGTCACCTTAGAACAGCTGGCCGCTGCGCCGTGGATCCTGCGTGAACGCGGTTCCGGCACGCGGGAGATTGTCGATTATCTGTTGCTGTCACATTTACCGAAGTTTGAGATGGCGATGGAATTAGGTAACTCCGAGGCAATCAAACATGCGGTGCGTCATGGGTTGGGAATTAGTTGCCTGTCGCGACGTGTGATTGAAGATCAATTGCAGGCAGGCACATTAAGTGAAGTTGCGGTCCCTCTGCCGCGCCTGATGCGTACGTTGTGGCGTATACATCATCGGCAAAAACACCTTTCCAACGCGCTACGGCGCTTTCTGGACTATTGCGATCCCGCAAATGTGCCGCGTTAA", - "dna_sequence_length": 882, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_2142", - "location": [ - [ - "NC_000913", - 2249618, - "-", - 882 - ] - ], - "md5": "9505926dce2333ce9d46ddb3685bcb97", - "parent_gene": "", - "protein_md5": "cc3e6fb6928dbf30678f50efdfaf37a0", - "protein_translation": "MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRIYASSTIGNYILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLARGPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLSNALRRFLDYCDPANVPR", - "protein_translation_length": 293, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P62723" - ], - [ - "gene_synonym", - "yeiH" - ], - [ - "gene_synonym", - "GI:16130096" - ], - [ - "gene_synonym", - "GeneID:946668" - ], - [ - "gene_synonym", - "b2158" - ], - [ - "gene_synonym", - "JW2145" - ], - [ - "gene_synonym", - "EcoGene:EG12027" - ], - [ - "gene_synonym", - "ECK2151" - ], - [ - "gene_synonym", - "ASAP:ABE-0007142" - ], - [ - "gene_synonym", - "NP_416663.1" - ] - ], - "dna_sequence": "ATGACGAATATCACCTTACAGAAACAACATCGTACACTGTGGCATTTTATTCCGGGGTTAGCCCTGAGTGCAGTTATCACCGGGGTCGCCCTGTGGGGTGGTTCCATTCCCGCGGTTGCGGGTGCCGGGTTTAGTGCCCTCACCCTCGCAATCTTGTTGGGGATGGTTTTAGGCAACACCATCTATCCGCACATCTGGAAAAGCTGTGACGGTGGTGTGCTGTTTGCCAAGCAATATTTATTACGTCTGGGTATCATTCTTTATGGCTTCCGTCTGACGTTCTCGCAAATTGCCGATGTCGGTATCAGTGGGATCATCATTGACGTGTTGACGCTGTCCAGTACCTTCCTGCTGGCTTGCTTCCTGGGGCAGAAAGTGTTTGGTCTGGATAAGCACACCAGCTGGTTGATCGGTGCCGGTAGCAGTATCTGTGGTGCTGCCGCGGTACTGGCGACTGAGCCGGTAGTGAAAGCGGAAGCCAGTAAAGTAACCGTGGCTGTTGCAACCGTTGTTATCTTCGGGACCGTCGCGATTTTCCTCTACCCGGCGATATATCCGCTGATGTCTCAATGGTTTAGTCCGGAAACTTTCGGTATCTACATTGGTTCTACTGTGCACGAAGTGGCGCAGGTGGTGGCGGCAGGTCATGCCATCAGCCCGGATGCGGAAAACGCAGCAGTTATTTCCAAAATGCTGCGCGTGATGATGCTGGCTCCGTTCCTCATCCTGCTGGCGGCGCGTGTTAAACAGCTGTCTGGGGCGAACAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCATCGTAGTTGCCATCTTTAACTCGTTCCACCTGTTACCGCAGAGCGTGGTGAACATGCTGGTAACGCTGGATACCTTCCTGCTGGCAATGGCGATGGCGGCGCTGGGTCTGACCACTCACGTCAGCGCGCTGAAAAAAGCTGGGGCGAAACCTCTGCTGATGGCACTGGTACTGTTTGCCTGGCTGATTGTTGGTGGTGGTGCGATTAACTATGTGATTCAAAGCGTCATCGCATAA", - "dna_sequence_length": 1050, - "functions": [ - "UPF0324 family inner membrane protein" - ], - "id": "CDS_2143", - "location": [ - [ - "NC_000913", - 2249717, - "+", - 1050 - ] - ], - "md5": "81d556c1f61cd76aad96077e36f7d2aa", - "parent_gene": "", - "protein_md5": "c004b46ac0d958685cc3dfd0e52110c7", - "protein_translation": "MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGFSALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGISGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEASKVTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAISPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIVVAIFNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLIVGGGAINYVIQSVIA", - "protein_translation_length": 349, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10651" - ], - [ - "gene_synonym", - "ECK2152" - ], - [ - "gene_synonym", - "nfo" - ], - [ - "gene_synonym", - "b2159" - ], - [ - "gene_synonym", - "GeneID:946669" - ], - [ - "gene_synonym", - "JW2146" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6C1" - ], - [ - "gene_synonym", - "GI:16130097" - ], - [ - "gene_synonym", - "NP_416664.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007146" - ] - ], - "dna_sequence": "ATGAAATACATTGGAGCGCACGTTAGTGCTGCTGGCGGTCTGGCAAATGCCGCAATTCGCGCCGCCGAAATCGACGCAACCGCGTTTGCCTTGTTCACCAAAAACCAACGTCAGTGGCGTGCCGCACCGCTCACGACGCAAACCATCGATGAATTCAAAGCCGCCTGTGAAAAATATCACTACACATCGGCGCAAATTCTTCCCCACGACAGTTATCTGATTAACCTCGGACATCCGGTCACTGAAGCTCTGGAAAAATCGCGCGATGCCTTTATAGATGAAATGCAGCGTTGCGAACAGCTGGGGCTTTCTTTGCTCAACTTCCACCCTGGCAGCCATCTGATGCAGATTTCAGAAGAGGATTGCCTTGCGCGTATTGCCGAATCCATCAACATTGCGCTGGATAAAACTCAAGGTGTGACAGCGGTGATAGAAAACACCGCCGGTCAGGGCAGTAACTTAGGGTTTAAATTCGAACATCTCGCGGCGATTATCGACGGCGTGGAAGATAAATCCCGCGTCGGCGTCTGCATTGATACCTGCCATGCTTTCGCTGCCGGGTATGATTTGCGTACTCCAGCCGAATGCGAGAAAACATTCGCGGATTTTGCCCGTACTGTCGGCTTTAAGTATCTGCGCGGGATGCACCTTAACGATGCGAAAAGCACCTTTGGCAGCCGCGTTGACCGCCATCATAGCCTCGGTGAAGGCAATATCGGTCATGATGCGTTCCGCTGGATCATGCAGGACGACCGTTTCGACGGCATTCCGCTGATCCTCGAAACCATCAACCCGGATATCTGGGCAGAAGAGATCGCCTGGCTGAAAGCGCAACAAACTGAAAAAGCGGTAGCCTGA", - "dna_sequence_length": 858, - "functions": [ - "endonuclease IV with intrinsic 3'-5' exonuclease activity" - ], - "id": "CDS_2144", - "location": [ - [ - "NC_000913", - 2250840, - "+", - 858 - ] - ], - "md5": "5372f5b26464cca3817f19a4001e5c02", - "parent_gene": "", - "protein_md5": "a6ae3b93949f7b83e1f48a1c29a8077d", - "protein_translation": "MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA", - "protein_translation_length": 285, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12028" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33020" - ], - [ - "gene_synonym", - "yeiI" - ], - [ - "gene_synonym", - "b2160" - ], - [ - "gene_synonym", - "GI:16130098" - ], - [ - "gene_synonym", - "ECK2153" - ], - [ - "gene_synonym", - "JW2147" - ], - [ - "gene_synonym", - "NP_416665.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007149" - ], - [ - "gene_synonym", - "GeneID:946640" - ] - ], - "dna_sequence": "ATGAATAACCGGGAAAAGGAGATCCTTGCAATTTTACGGCGTAACCCGCTGATTCAGCAGAACGAAATTGCGGACATGCTGCAAATCAGCCGTTCGCGCGTTGCGGCGCATATTATGGATTTAATGCGCAAAGGCCGGATTAAAGGCAAAGGTTACATTCTCACCGAGCAGGAATACTGCGTAGTGGTGGGGACAATCAATATGGATATTCGCGGGATGGCGGATATCCGTTACCCGCAATCGGCTTCTCATCCCGGTACAATTCATTGCTCAGCGGGCGGCGTGGGACGCAACATCGCCCACAATCTGGCGCTGTTAGGCCGTGACGTCCATTTGCTTTCAGTGATTGGCGATGACTTTTATGGCGAAATGCTCCTGGAAGAAACGCGCCGTGCCGGCGTGAATGTCTCCGGCTGCGTTCGTTTGCATGGTCAAAGCACATCGACGTATCTGGCAATTGCCAATCGAGACGATCAAACCGTGCTGGCGATTAACGATACCCATCTGCTGGAACAGTTGACACCGCAACTACTGAACGGGTCGCGCGATTTACTTCGTCATGCGGGCGTGGTACTGGCTGATTGCAACCTGACAGCCGAGGCGCTGGAATGGGTCTTTACCCTCGCTGATGAAATCCCGGTGTTTGTCGATACCGTTTCAGAATTCAAAGCGGGCAAAATCAAACACTGGCTGGCGCATATTCACACCCTGAAACCCACTTTACCGGAGCTGGAAATTTTATGGGGACAGGCGATCACCAGCGATGCTGACCGTAATACCGCAGTGAATGCATTGCATCAGCAAGGTGTTCAGCAACTGTTTGTTTATTTGCCCGATGAGTCAGTTTATTGCAGCGAAAAGGATGGAGAACAATTTTTGCTGACCGCGCCAGCGCATACGACAGTAGACAGTTTTGGTGCTGACGATGGTTTTATGGCGGGCCTGGTATATAGCTTTCTTGAAGGATACAGTTTCCGCGACAGCGCCCGTTTTGCGGTAGCCTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAA", - "dna_sequence_length": 1089, - "functions": [ - "putative kinase" - ], - "id": "CDS_2145", - "location": [ - [ - "NC_000913", - 2251700, - "+", - 1089 - ] - ], - "md5": "12f863884a79fb28a8b4b48f67471573", - "parent_gene": "", - "protein_md5": "73175ae3c97b07fa6aa7a76022803a31", - "protein_translation": "MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRKGRIKGKGYILTEQEYCVVVGTINMDIRGMADIRYPQSASHPGTIHCSAGGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQTVLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDTVSEFKAGKIKHWLAHIHTLKPTLPELEILWGQAITSDADRNTAVNALHQQGVQQLFVYLPDESVYCSEKDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAVACAAISRASGSLNNPTLSADNALSLVPMV", - "protein_translation_length": 362, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2154" - ], - [ - "gene_synonym", - "JW2148" - ], - [ - "gene_synonym", - "NP_416666.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33021" - ], - [ - "gene_synonym", - "GI:16130099" - ], - [ - "gene_synonym", - "yeiJ" - ], - [ - "gene_synonym", - "b2161" - ], - [ - "gene_synonym", - "EcoGene:EG12029" - ], - [ - "gene_synonym", - "GeneID:946655" - ], - [ - "gene_synonym", - "nupX" - ], - [ - "gene_synonym", - "ASAP:ABE-0007152" - ] - ], - "dna_sequence": "ATGGATGTCATGAGAAGTGTTCTGGGAATGGTGGTATTGCTGACGATTGCGTTTTTACTGTCAGTAAACAAGAAGAAGATCAGCCTGCGTACCGTTGGCGCGGCGTTAGTGTTACAGGTCGTGATTGGCGGCATTATGCTTTGGTTACCGCCAGGGCGTTGGGTCGCTGAAAAAGTCGCTTTTGGCGTGCATAAAGTGATGGCGTACAGCGACGCGGGTAGCGCATTTATCTTCGGTTCTCTGGTCGGACCGAAAATGGATACCTTATTTGATGGTGCAGGATTTATCTTTGGTTTCAGGGTGTTACCGGCAATTATCTTCGTCACCGCGCTGGTGAGTATTCTCTACTACATCGGTGTGATGGGGATTTTAATTCGAATTCTCGGCGGTATCTTCCAGAAAGCATTAAATATCAGCAAGATCGAGTCATTCGTCGCGGTCACCACCATTTTCCTCGGGCAAAACGAAATTCCGGCAATCGTCAAACCCTTTATCGATCGTCTGAATCGCAATGAATTATTTACAGCGATTTGTAGTGGCATGGCCTCGATTGCTGGTTCGACAATGATTGGTTACGCCGCACTGGGCGTGCCTGTGGAATATCTGCTGGCGGCATCATTAATGGCGATCCCTGGCGGGATCTTGTTTGCCCGCCTGTTAAGCCCGGCAACGGAATCTTCGCAGGTTTCCTTTAATAACCTCTCTTTCACCGAAACACCGCCAAAAAGCATTATTGAAGCCGCTGCGACAGGGGCAATGACCGGGCTGAAAATCGCCGCAGGTGTGGCAACAGTGGTGATGGCATTTGTTGCAATAATTGCGTTGATTAACGGTATTATCGGCGGCGTTGGTGGCTGGTTTGGTTTTGAACATGCCTCGCTGGAGTCCATTTTAGGTTACCTGCTGGCTCCACTGGCGTGGGTGATGGGTGTGGACTGGAGTGATGCGAATCTTGCCGGGAGTTTGATTGGACAGAAACTGGCAATAAATGAATTTGTCGCTTATCTCAATTTCTCACCCTATCTGCAAACGGCTGGCACTCTCGATGCTAAAACTGTGGCGATTATTTCCTTCGCGTTGTGCGGTTTCGCTAACTTTGGTTCTATCGGGGTGGTGGTGGGGGCGTTTTCTGCGGTTGCGCCACACCGTGCGCCGGAAATCGCCCAGCTTGGTTTACGGGCGCTGGCGGCGGCGACGCTTTCCAACTTGATGAGTGCGACCATTGCCGGGTTCTTTATTGGTTTAGCTTGA", - "dna_sequence_length": 1251, - "functions": [ - "nucleoside permease" - ], - "id": "CDS_2146", - "location": [ - [ - "NC_000913", - 2254145, - "-", - 1251 - ] - ], - "md5": "8ad95817bf81e0d13feb9b299455571f", - "parent_gene": "", - "protein_md5": "913f849a181031b124f381472e2e2bff", - "protein_translation": "MDVMRSVLGMVVLLTIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVAFGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARLLSPATESSQVSFNNLSFTETPPKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFEHASLESILGYLLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVAYLNFSPYLQTAGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATLSNLMSATIAGFFIGLA", - "protein_translation_length": 416, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2149" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33022" - ], - [ - "gene_synonym", - "b2162" - ], - [ - "gene_synonym", - "yeiK" - ], - [ - "gene_synonym", - "NP_416667.1" - ], - [ - "gene_synonym", - "EcoGene:EG12030" - ], - [ - "gene_synonym", - "GI:16130100" - ], - [ - "gene_synonym", - "GeneID:946646" - ], - [ - "gene_synonym", - "ASAP:ABE-0007156" - ], - [ - "gene_synonym", - "rihB" - ], - [ - "gene_synonym", - "ECK2155" - ] - ], - "dna_sequence": "ATGGAAAAGAGAAAAATTATTCTGGATTGTGATCCGGGTCATGATGATGCTATTGCTATAATGATGGCGGCGAAACATCCGGCAATAGATTTATTAGGCATCACTATTGTAGCGGGTAATCAGACGCTTGATAAAACATTAATTAATGGCCTGAATGTTTGCCAGAAACTGGAGATTAATGTTCCGGTTTATGCGGGGATGCCGCAGCCCATTATGCGTCAACAAATCGTTGCCGATAATATTCACGGTGAAACCGGACTGGATGGCCCGGTATTCGAGCCGCTGACCCGCCAGGCAGAAAGCACTCATGCGGTGAAATATATCATTGATACCCTGATGGCAAGCGATGGCGATATCACTCTGGTGCCGGTTGGTCCGCTTTCAAATATCGCGGTGGCAATGCGTATGCAACCCGCGATCCTGCCCAAAATCCGTGAAATTGTGCTAATGGGCGGCGCTTACGGTACAGGCAACTTCACGCCATCTGCCGAGTTCAACATCTTTGCCGACCCGGAAGCCGCACGCGTAGTGTTCACCTCCGGCGTTCCATTAGTGATGATGGGCCTCGATCTCACCAACCAGACCGTTTGCACCCCGGACGTGATTGCTCGGATGGAAAGGGCAGGCGGCCCCGCCGGAGAGCTGTTCAGCGACATCATGAACTTCACTCTCAAAACGCAGTTCGAAAACTACGGCCTTGCTGGCGGCCCGGTGCACGACGCCACCTGCATCGGTTATCTGATTAACCCTGATGGCATTAAAACCCAGGAGATGTACGTCGAAGTGGACGTCAACAGTGGCCCTTGCTATGGGCGTACCGTCTGCGACGAGCTGGGCGTTCTTGGCAAGCCCGCCAATACCAAAGTCGGCATCACTATTGATACAGACTGGTTCTGGGGATTAGTCGAAGAGTGCGTGCGCGGCTACATCAAAACCCATTAA", - "dna_sequence_length": 942, - "functions": [ - "ribonucleoside hydrolase 2" - ], - "id": "CDS_2147", - "location": [ - [ - "NC_000913", - 2255186, - "-", - 942 - ] - ], - "md5": "ee71d9896fd4ad37bddd62e1e1ca5af4", - "parent_gene": "", - "protein_md5": "805640c60a9d0766f8ecef4e3cfdb729", - "protein_translation": "MEKRKIILDCDPGHDDAIAIMMAAKHPAIDLLGITIVAGNQTLDKTLINGLNVCQKLEINVPVYAGMPQPIMRQQIVADNIHGETGLDGPVFEPLTRQAESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGYIKTH", - "protein_translation_length": 313, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416668.3" - ], - [ - "gene_synonym", - "yeiL" - ], - [ - "gene_synonym", - "ECK2156" - ], - [ - "gene_synonym", - "GI:49176193" - ], - [ - "gene_synonym", - "b2163" - ], - [ - "gene_synonym", - "GeneID:946670" - ], - [ - "gene_synonym", - "EcoGene:EG12031" - ], - [ - "gene_synonym", - "ASAP:ABE-0007160" - ], - [ - "gene_synonym", - "JW2150" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9E9" - ] - ], - "dna_sequence": "ATGAGTGAATCCGCGTTTAAGGATTGCTTTTTAACGGATGTTTCAGCCGATACGCGGCTGTTTCATTTTTTAGCGCGTGACTACATTGTGCAGGAAGGGCAACAGCCGTCCTGGCTGTTTTACCTGACGCGAGGCCGCGCCAGGCTTTACGCCACGCTAGCTAATGGTCGCGTGTCGCTGATCGATTTCTTTGCCGCCCCCTGTTTTATTGGCGAGATTGAGTTAATCGATAAAGACCATGAACCGCGTGCGGTGCAGGCTATTGAAGAGTGTTGGTGCCTTGCGCTCCCTATGAAACATTACCGTCCGCTGTTATTAAACGACACGCTATTTTTACGAAAACTCTGCGTCACCTTAAGTCATAAAAATTATCGTAATATTGTTTCTTTAACTCAGAATCAATCATTTCCGTTAGTGAATCGCCTGGCAGCATTTATATTACTCTCGCAGGAAGGTGATCTTTATCACGAAAAGCATACGCAAGCGGCAGAGTATTTAGGCGTTTCTTATCGACATCTTTTATATGTTCTCGCGCAGTTCATTCACGACGGTTTATTAATTAAAAGCAAGAAAGGGTATCTCATTAAAAACAGAAAGCAGTTGTCAGGACTGGCGCTGGAGATGGACCCGGAGAATAAATTCTCCGGGATGATGCAGTAA", - "dna_sequence_length": 660, - "functions": [ - "putative transcriptional regulator" - ], - "id": "CDS_2148", - "location": [ - [ - "NC_000913", - 2255355, - "+", - 660 - ] - ], - "md5": "c16bee25973c6da24539295d091560a4", - "parent_gene": "", - "protein_md5": "074864fc750f467a166295a758200fd3", - "protein_translation": "MSESAFKDCFLTDVSADTRLFHFLARDYIVQEGQQPSWLFYLTRGRARLYATLANGRVSLIDFFAAPCFIGEIELIDKDHEPRAVQAIEECWCLALPMKHYRPLLLNDTLFLRKLCVTLSHKNYRNIVSLTQNQSFPLVNRLAAFILLSQEGDLYHEKHTQAAEYLGVSYRHLLYVLAQFIHDGLLIKSKKGYLIKNRKQLSGLALEMDPENKFSGMMQ", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yeiM" - ], - [ - "gene_synonym", - "ASAP:ABE-0007163" - ], - [ - "gene_synonym", - "b2164" - ], - [ - "gene_synonym", - "ECK2157" - ], - [ - "gene_synonym", - "psuT" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33024" - ], - [ - "gene_synonym", - "EcoGene:EG12032" - ], - [ - "gene_synonym", - "GeneID:946671" - ], - [ - "gene_synonym", - "pscT" - ], - [ - "gene_synonym", - "NP_416669.1" - ], - [ - "gene_synonym", - "JW2151" - ], - [ - "gene_synonym", - "GI:16130102" - ] - ], - "dna_sequence": "ATGGATATAATGAGAAGTGTTGTGGGGATGGTGGTGTTACTGGCAATAGCATTTCTGTTGTCAGTGAATAAAAAGAGCATCAGTTTGCGCACGGTTGGAGCCGCACTGCTGCTGCAAATCGCTATTGGTGGCATCATGCTCTACTTCCCACCGGGAAAATGGGCAGTAGAACAGGCGGCATTAGGCGTTCATAAAGTGATGTCTTACAGTGATGCCGGTAGCGCCTTCATTTTTGGTTCGCTGGTTGGGCCGAAAATGGATGTCCTGTTTGACGGTGCGGGTTTTATCTTCGCCTTTCGCGTACTTCCGGCGATTATTTTCGTTACTGCGCTCATCAGTCTGCTGTACTACATTGGCGTGATGGGGCTGCTGATTCGCATCCTTGGCAGCATTTTCCAGAAAGCCCTCAACATCAGCAAAATCGAATCTTTTGTTGCGGTTACTACTATTTTCCTCGGGCAAAATGAGATCCCGGCGATCGTTAAACCGTTTATCGATCGCATGAATCGCAACGAGTTGTTTACCGCAATTTGTAGCGGGATGGCGTCCATTGCTGGTTCGATGATGATTGGTTATGCCGGAATGGGCGTACCAATTGACTACCTGTTAGCGGCATCGCTGATGGCGATCCCTGGCGGGATTTTGTTTGCACGTATTCTTAGCCCGGCAACCGAGCCTTCGCAGGTCACATTTGAAAATCTGTCGTTCAGCGAAACGCCGCCAAAAAGCTTTATCGAAGCGGCGGCGAGCGGTGCGATGACCGGGCTAAAAATCGCCGCTGGTGTGGCGACGGTGGTAATGGCGTTTGTCGCAATTATTGCGCTGATCAACGGCATTATCGGCGGAATTGGCGGCTGGTTTGGTTTCGCCAATGCCTCTCTGGAAAGTATTTTTGGCTATGTGCTGGCACCGCTGGCGTGGATCATGGGTGTGGACTGGAGTGATGCCAATCTTGCGGGTAGCCTGATTGGGCAGAAACTGGCGATTAACGAATTCGTCGCTTACCTGAGTTTCTCCCCATACCTGCAAACGGGCGGCACGCTGGAAGTGAAAACCATTGCGATTATCTCCTTTGCGCTTTGTGGTTTTGCTAACTTTGGTTCTATCGGTGTTGTCGTTGGCGCATTTTCGGCTATTTCGCCAAAACGCGCGCCGGAAATCGCCCAGCTTGGTTTACGGGCGCTGGCAGCAGCAACGCTTTCCAACCTGATGAGTGCGACTATTGCCGGGTTCTTTATTGGTCTGGCGTAA", - "dna_sequence_length": 1251, - "functions": [ - "putative nucleoside transporter" - ], - "id": "CDS_2149", - "location": [ - [ - "NC_000913", - 2257335, - "-", - 1251 - ] - ], - "md5": "dc55825c3488e6b4a75a41df14becf46", - "parent_gene": "", - "protein_md5": "41a1479eeb79d18fed416f7416096c32", - "protein_translation": "MDIMRSVVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGGIMLYFPPGKWAVEQAALGVHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVLPAIIFVTALISLLYYIGVMGLLIRILGSIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRMNRNELFTAICSGMASIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFARILSPATEPSQVTFENLSFSETPPKSFIEAAASGAMTGLKIAAGVATVVMAFVAIIALINGIIGGIGGWFGFANASLESIFGYVLAPLAWIMGVDWSDANLAGSLIGQKLAINEFVAYLSFSPYLQTGGTLEVKTIAIISFALCGFANFGSIGVVVGAFSAISPKRAPEIAQLGLRALAAATLSNLMSATIAGFFIGLA", - "protein_translation_length": 416, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416670.1" - ], - [ - "gene_synonym", - "yeiN" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33025" - ], - [ - "gene_synonym", - "ASAP:ABE-0007165" - ], - [ - "gene_synonym", - "EcoGene:EG12033" - ], - [ - "gene_synonym", - "ECK2158" - ], - [ - "gene_synonym", - "GI:16130103" - ], - [ - "gene_synonym", - "b2165" - ], - [ - "gene_synonym", - "JW2152" - ], - [ - "gene_synonym", - "psuG" - ], - [ - "gene_synonym", - "GeneID:946699" - ], - [ - "gene_synonym", - "pscG" - ] - ], - "dna_sequence": "ATGTCTGAATTAAAAATTTCCCCTGAATTATTACAAATTTCCCCGGAAGTGCAGGACGCTTTAAAAAACAAAAAACCGGTTGTGGCGCTGGAATCGACCATTATTTCTCACGGGATGCCGTTCCCACAAAATGCCCAGACCGCAATTGAAGTTGAAGAAACTATTCGTAAACAGGGCGCTGTACCTGCCACGATCGCCATTATTGGCGGCGTGATGAAAGTGGGGTTAAGCAAAGAAGAAATTGAATTACTGGGTCGTGAAGGGCATAACGTGACCAAAGTTAGTCGTCGCGATTTACCTTTTGTTGTTGCCGCCGGAAAAAATGGCGCAACCACTGTGGCTTCAACGATGATTATTGCGGCGCTTGCCGGAATTAAAGTATTTGCCACCGGGGGAATTGGTGGTGTGCATCGCGGGGCGGAACATACCTTCGATATTTCTGCCGATTTGCAAGAACTGGCAAATACTAATGTCACCGTTGTTTGTGCCGGGGCGAAATCTATTCTCGATTTAGGATTAACCACTGAGTATTTAGAAACCTTCGGTGTGCCGTTAATTGGCTATCAGACTAAAGCGCTGCCTGCGTTTTTCTGCCGCACCAGCCCGTTTGACGTCAGCATTCGTCTCGACAGCGCCAGCGAAATTGCCCGTGCAATGGTGGTGAAATGGCAAAGCGGTCTGAACGGTGGCCTCGTGGTAGCGAACCCGATCCCGGAACAGTTTGCTATGCCGGAACACACTATCAATGCGGCGATCGATCAGGCGGTAGCTGAAGCTGAAGCTCAGGGAGTCATTGGTAAAGAAAGTACGCCATTCCTGCTGGCGCGCGTTGCTGAACTGACCGGCGGTGACAGCCTGAAATCCAACATCCAGCTGGTGTTCAACAACGCCATTCTGGCGAGCGAAATTGCCAAAGAATATCAGCGTCTCGCGGGTTAA", - "dna_sequence_length": 939, - "functions": [ - "pseudouridine 5'-phosphate glycosidase" - ], - "id": "CDS_2150", - "location": [ - [ - "NC_000913", - 2258367, - "-", - 939 - ] - ], - "md5": "0b84f27552a44f900b724ef18c830e42", - "parent_gene": "", - "protein_md5": "99a92a7ea287a307adb08891af47c735", - "protein_translation": "MSELKISPELLQISPEVQDALKNKKPVVALESTIISHGMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVSRRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSPFDVSIRLDSASEIARAMVVKWQSGLNGGLVVANPIPEQFAMPEHTINAAIDQAVAEAEAQGVIGKESTPFLLARVAELTGGDSLKSNIQLVFNNAILASEIAKEYQRLAG", - "protein_translation_length": 312, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2166" - ], - [ - "gene_synonym", - "NP_416671.1" - ], - [ - "gene_synonym", - "GeneID:946664" - ], - [ - "gene_synonym", - "GI:16130104" - ], - [ - "gene_synonym", - "ASAP:ABE-0007168" - ], - [ - "gene_synonym", - "ECK2159" - ], - [ - "gene_synonym", - "yeiC" - ], - [ - "gene_synonym", - "pscK" - ], - [ - "gene_synonym", - "JW2153" - ], - [ - "gene_synonym", - "EcoGene:EG11646" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30235" - ], - [ - "gene_synonym", - "psuK" - ] - ], - "dna_sequence": "ATGCGCGAAAAGGATTATGTCGTAATTATAGGTTCGGCGAATATTGATGTCGCCGGATATTCACATGAATCATTAAATTATGCGGATTCAAATCCAGGTAAAATAAAATTTACGCCTGGTGGAGTAGGGCGCAATATTGCACAAAACCTGGCGTTGCTGGGTAACAAAGCCTGGCTACTGAGCGCCGTAGGCAGTGATTTTTATGGTCAATCGCTGCTAACGCAAACCAATCAATCTGGCGTTTATGTCGATAAATGCCTGATTGTGCCGGGAGAAAATACGTCGAGTTATTTATCATTACTCGATAATACCGGTGAAATGCTGGTTGCTATAAATGACATGAATATTAGCAACGCTATTACAGCTGAATATCTCGCACAGCACGGTGAATTTATTCAGAGGGCAAAGGTCATTGTCGCGGACTGTAATATCAGTGAAGAGGCACTGGCATGGATTCTGGATAATGCCGCCAACGTACCCGTATTTGTCGATCCGGTTTCGGCATGGAAATGTGTCAAAGTGCGCGACCGTCTAAATCAGATCCACACTCTCAAGCCAAACCGCCTTGAAGCGGAAACCCTGAGTGGGATTGCGCTGTCAGGGCGTGAAGATGTGGCAAAAGTTGCTGCCTGGTTCCATCAACATGGCCTGAACCGACTGGTATTGAGCATGGGCGGCGACGGCGTTTATTACAGCGATATCAGCGGTGAAAGTGGCTGGTCTGCGCCGATCAAAACCAATGTTATTAATGTTACCGGAGCGGGCGATGCCATGATGGCGGGACTTGCTTCGTGTTGGGTAGACGGAATGCCGTTTGCCGAATCTGTTCGTTTCGCACAGGGATGTTCGTCAATGGCGCTCTCCTGTGAATACACCAATAACCCCGATTTATCGATTGCCAACGTTATATCGTTAGTGGAGAACGCAGAATGTCTGAATTAA", - "dna_sequence_length": 942, - "functions": [ - "pseudouridine kinase" - ], - "id": "CDS_2151", - "location": [ - [ - "NC_000913", - 2259296, - "-", - 942 - ] - ], - "md5": "40ac8285bd8840ddc565241452197406", - "parent_gene": "", - "protein_md5": "7bd5eb95b9c853157f4cb3a020d91cb2", - "protein_translation": "MREKDYVVIIGSANIDVAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMNISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWILDNAANVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGGDGVYYSDISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSSMALSCEYTNNPDLSIANVISLVENAECLN", - "protein_translation_length": 313, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2167" - ], - [ - "gene_synonym", - "GeneID:946672" - ], - [ - "gene_synonym", - "ECK2160" - ], - [ - "gene_synonym", - "GI:16130105" - ], - [ - "gene_synonym", - "ASAP:ABE-0007172" - ], - [ - "gene_synonym", - "EcoGene:EG10336" - ], - [ - "gene_synonym", - "NP_416672.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P20966" - ], - [ - "gene_synonym", - "JW2154" - ], - [ - "gene_synonym", - "fruA" - ], - [ - "gene_synonym", - "ptsF" - ] - ], - "dna_sequence": "ATGAAAACGCTGCTGATTATTGACGCTAATCTCGGTCAGGCACGCGCCTATATGGCGAAGACCCTGCTGGGCGCGGCGGCGCGAAAAGCAAAACTGGAAATCATCGACAATCCGAACGACGCTGAAATGGCGATTGTTCTCGGTGATTCCATCCCGAACGACAGCGCGCTGAACGGTAAAAATGTCTGGCTGGGCGATATTTCCCGGGCAGTTGCGCACCCTGAGCTGTTCCTGAGTGAAGCCAAAGGCCATGCGAAACCTTACACTGCGCCGGTCGCTGCGACAGCACCAGTTGCCGCCAGCGGTCCGAAACGCGTAGTTGCGGTGACTGCTTGCCCGACTGGCGTAGCACACACCTTTATGGCGGCTGAAGCCATTGAAACCGAAGCGAAAAAACGTGGCTGGTGGGTGAAAGTTGAAACCCGTGGTTCTGTTGGCGCGGGTAATGCAATCACTCCCGAAGAAGTCGCAGCAGCGGATCTGGTGATTGTGGCGGCAGATATCGAAGTGGATCTGGCGAAATTTGCTGGTAAACCGATGTATCGTACCTCTACCGGTCTGGCGCTGAAGAAAACCGCGCAGGAACTGGATAAAGCGGTTGCTGAAGCAACGCCGTATGAACCGGCGGGCAAAGCTCAAACGGCGACCACTGAAAGTAAGAAAGAGAGTGCAGGCGCATACCGTCACTTGCTGACGGGCGTTTCTTACATGCTGCCGATGGTCGTTGCAGGTGGTCTGTGTATCGCGCTTTCTTTTGCTTTTGGTATCGAAGCGTTTAAAGAGCCGGGTACGTTGGCTGCGGCGCTGATGCAGATTGGTGGTGGTTCAGCCTTTGCGCTGATGGTGCCGGTACTGGCAGGTTATATTGCCTTTTCCATTGCCGATCGTCCGGGCCTCACTCCGGGTCTGATTGGCGGTATGCTGGCGGTCAGCACCGGTTCTGGCTTCATTGGTGGTATTATTGCGGGCTTCCTGGCTGGTTACATTGCGAAGTTAATCAGTACGCAATTGAAACTGCCACAGAGTATGGAGGCGCTGAAACCGATCCTGATCATTCCGCTAATTTCCAGTCTGGTGGTCGGTCTGGCGATGATCTACCTGATCGGTAAACCAGTTGCTGGCATTCTCGAAGGGCTGACTCACTGGCTGCAGACCATGGGGACTGCGAATGCGGTTCTGCTGGGGGCGATCCTCGGTGGCATGATGTGTACTGACATGGGCGGTCCGGTAAACAAAGCAGCGTACGCATTCGGTGTGGGTCTGCTGAGTACTCAAACCTATGGCCCGATGGCGGCGATTATGGCGGCAGGTATGGTGCCACCGCTGGCAATGGGTCTGGCAACAATGGTGGCGCGTCGCAAATTCGACAAAGCGCAGCAGGAAGGTGGCAAAGCCGCTCTGGTATTGGGACTGTGCTTCATTTCGGAAGGTGCAATTCCGTTTGCTGCTCGTGATCCGATGCGTGTGCTGCCGTGCTGTATCGTGGGTGGGGCGCTGACTGGCGCAATCTCAATGGCGATTGGTGCGAAACTGATGGCACCGCACGGTGGTCTGTTTGTTCTGCTGATCCCTGGCGCTATTACGCCGGTATTGGGTTACCTGGTAGCAATTATTGCCGGTACGCTGGTGGCGGGTTTGGCCTATGCCTTCCTGAAACGTCCGGAAGTGGACGCAGTAGCGAAAGCAGCGTAA", - "dna_sequence_length": 1692, - "functions": [ - "fused fructose-specific PTS enzymes: IIBcomponent/IIC components" - ], - "id": "CDS_2152", - "location": [ - [ - "NC_000913", - 2261410, - "-", - 1692 - ] - ], - "md5": "4839ed59838e9717ca6298c89a19339d", - "parent_gene": "", - "protein_md5": "3e4c32d28b0bea753a45d03181153eea", - "protein_translation": "MKTLLIIDANLGQARAYMAKTLLGAAARKAKLEIIDNPNDAEMAIVLGDSIPNDSALNGKNVWLGDISRAVAHPELFLSEAKGHAKPYTAPVAATAPVAASGPKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAADLVIVAADIEVDLAKFAGKPMYRTSTGLALKKTAQELDKAVAEATPYEPAGKAQTATTESKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGSAFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLISTQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAVLLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATMVARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISMAIGAKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLKRPEVDAVAKAA", - "protein_translation_length": 563, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2161" - ], - [ - "gene_synonym", - "ASAP:ABE-0007174" - ], - [ - "gene_synonym", - "GeneID:946676" - ], - [ - "gene_synonym", - "GI:16130106" - ], - [ - "gene_synonym", - "EcoGene:EG10337" - ], - [ - "gene_synonym", - "fpk" - ], - [ - "gene_synonym", - "fruK" - ], - [ - "gene_synonym", - "JW2155" - ], - [ - "gene_synonym", - "b2168" - ], - [ - "gene_synonym", - "NP_416673.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEW9" - ] - ], - "dna_sequence": "ATGAGCAGACGTGTTGCTACTATCACCCTTAATCCGGCTTATGACCTTGTTGGTTTCTGCCCGGAAATTGAACGCGGCGAAGTGAACCTGGTGAAAACCACCGGTCTGCATGCGGCGGGTAAAGGCATCAACGTGGCCAAAGTATTAAAAGACCTGGGAATTGATGTCACCGTTGGCGGCTTCCTGGGTAAAGACAATCAGGATGGTTTTCAGCAACTGTTCAGCGAGCTGGGCATTGCCAACCGTTTCCAGGTTGTACAGGGGCGCACCCGAATTAACGTTAAGCTGACGGAAAAAGACGGCGAAGTGACCGACTTCAACTTCTCGGGTTTTGAAGTCACCCCCGCCGACTGGGAACGCTTTGTGACTGATTCTCTGAGCTGGCTCGGTCAGTTCGATATGGTCTGTGTCAGCGGAAGCTTACCGTCAGGCGTCAGCCCGGAAGCGTTCACCGACTGGATGACTCGCCTGCGTAGTCAGTGTCCTTGCATTATCTTTGATAGTAGCCGTGAAGCGTTAGTAGCAGGTTTGAAAGCGGCACCGTGGCTGGTGAAACCTAACCGCCGCGAGCTGGAAATCTGGGCAGGCCGTAAACTGCCTGAAATGAAAGATGTGATTGAAGCTGCACATGCGCTACGTGAACAAGGCATCGCGCATGTTGTTATTTCACTGGGTGCCGAAGGCGCGCTTTGGGTTAATGCCTCCGGCGAATGGATCGCCAAACCACCGTCAGTCGATGTCGTAAGCACCGTTGGCGCAGGGGATTCTATGGTTGGTGGCCTGATTTATGGCTTGCTGATGCGTGAATCCAGTGAACACACACTGCGTCTGGCGACAGCTGTTGCAGCCCTGGCGGTAAGTCAAAGCAATGTGGGTATTACCGATCGTCCGCAGTTGGCCGCAATGATGGCGCGCGTCGACTTACAACCTTTTAACTGA", - "dna_sequence_length": 939, - "functions": [ - "fructose-1-phosphate kinase" - ], - "id": "CDS_2153", - "location": [ - [ - "NC_000913", - 2262365, - "-", - 939 - ] - ], - "md5": "9e59fb93dbc345c0d526a120d4846341", - "parent_gene": "", - "protein_md5": "5648dbdd01a92664ee65d6337de4ceed", - "protein_translation": "MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGINVAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGEVTDFNFSGFEVTPADWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQCPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIAHVVISLGAEGALWVNASGEWIAKPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN", - "protein_translation_length": 312, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10005" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69811" - ], - [ - "gene_synonym", - "ECK2162" - ], - [ - "gene_synonym", - "NP_416674.1" - ], - [ - "gene_synonym", - "GeneID:946677" - ], - [ - "gene_synonym", - "ASAP:ABE-0007180" - ], - [ - "gene_synonym", - "GI:16130107" - ], - [ - "gene_synonym", - "b2169" - ], - [ - "gene_synonym", - "JW2156" - ], - [ - "gene_synonym", - "fpr" - ], - [ - "gene_synonym", - "fruB" - ], - [ - "gene_synonym", - "fruF" - ] - ], - "dna_sequence": "ATGTTCCAGTTATCCGTACAGGACATCCATCCGGGCGAAAAGGCCGGAGACAAAGAAGAGGCGATTCGCCAGGTCGCTGCGGCGCTGGTGCAGGCCGGTAATGTAGCAGAAGGCTACGTCAATGGCATGCTGGCGCGCGAACAGCAAACCTCAACGTTCCTCGGCAATGGTATTGCTATTCCACACGGCACTACCGACACCCGCGATCAGGTGCTGAAAACCGGCGTTCAGGTATTTCAGTTCCCGGAAGGCGTCACCTGGGGTGACGGTCAGGTAGCGTACGTGGCAATCGGTATTGCTGCCAGCTCGGATGAACATCTGGGCCTGCTACGCCAGCTGACCCACGTACTGAGCGATGATTCCGTTGCTGAACAACTGAAGTCAGCAACAACAGCAGAAGAACTTCGCGCATTACTGATGGGCGAAAAGCAGAGTGAGCAGCTGAAGCTCGACAACGAAATGCTGACACTGGATATCGTCGCCAGCGATCTGCTGACTCTTCAGGCGCTGAACGCTGCGCGTCTGAAAGAGGCGGGGGCAGTTGACGCCACTTTCGTCACCAAAGCCATCAATGAACAACCGCTGAATCTCGGACAGGGTATCTGGCTGAGCGATAGCGCCGAAGGCAATCTGCGTAGCGCGATTGCGGTAAGCCGTGCGGCAAATGCTTTTGATGTGGACGGCGAAACGGCAGCCATGCTGGTGAGTGTGGCGATGAATGACGATCAGCCCATCGCGGTTCTTAAGCGTCTCGCTGATTTATTGCTCGACAATAAAGCTGACCGCTTGCTGAAAGCGGATGCGGCAACGTTGCTGGCGCTGCTGACCAGCGATGATGCGCCGACCGACGACGTGTTAAGCGCGGAGTTTGTGGTGCGCAATGAACACGGCCTGCATGCTCGTCCAGGTACCATGCTGGTCAATACCATTAAACAATTTAACAGTGATATTACCGTGACAAACCTTGATGGTACCGGCAAACCGGCAAACGGACGTAGTCTGATGAAAGTTGTGGCACTTGGCGTTAAGAAAGGTCATCGCCTACGCTTTACCGCCCAGGGTGCAGATGCTGAACAGGCGCTGAAAGCAATCGGCGACGCTATCGCTGCTGGTCTTGGGGAGGGCGCATAA", - "dna_sequence_length": 1131, - "functions": [ - "fused fructose-specific PTS enzymes: IIA component/HPr component" - ], - "id": "CDS_2154", - "location": [ - [ - "NC_000913", - 2263495, - "-", - 1131 - ] - ], - "md5": "cea33c337f8a2de16972d53716945a16", - "parent_gene": "", - "protein_md5": "76d373ba0068fd85094e2559dd07a94a", - "protein_translation": "MFQLSVQDIHPGEKAGDKEEAIRQVAAALVQAGNVAEGYVNGMLAREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVFQFPEGVTWGDGQVAYVAIGIAASSDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKLDNEMLTLDIVASDLLTLQALNAARLKEAGAVDATFVTKAINEQPLNLGQGIWLSDSAEGNLRSAIAVSRAANAFDVDGETAAMLVSVAMNDDQPIAVLKRLADLLLDNKADRLLKADAATLLALLTSDDAPTDDVLSAEFVVRNEHGLHARPGTMLVNTIKQFNSDITVTNLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALKAIGDAIAAGLGEGA", - "protein_translation_length": 376, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2163" - ], - [ - "gene_synonym", - "b2170" - ], - [ - "gene_synonym", - "setB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33026" - ], - [ - "gene_synonym", - "ASAP:ABE-0007184" - ], - [ - "gene_synonym", - "yeiO" - ], - [ - "gene_synonym", - "EcoGene:EG12034" - ], - [ - "gene_synonym", - "JW2157" - ], - [ - "gene_synonym", - "NP_416675.1" - ], - [ - "gene_synonym", - "GeneID:946673" - ], - [ - "gene_synonym", - "GI:16130108" - ] - ], - "dna_sequence": "ATGCATAACTCCCCCGCAGTCTCCAGCGCGAAATCGTTTGACCTGACCTCGACGGCGTTTTTAATCGTTGCCTTTCTCACCGGTATTGCGGGCGCTCTGCAAACCCCGACACTCAGTATTTTTCTTACCGATGAAGTACATGCCCGTCCGGCGATGGTGGGATTCTTCTTTACCGGCAGCGCTGTCATTGGGATTCTGGTAAGTCAGTTTCTCGCCGGGCGCTCTGATAAGCGCGGCGATCGCAAATCGCTGATTGTCTTTTGCTGCCTGTTAGGCGTGCTGGCCTGCACCCTTTTTGCCTGGAATCGCAACTACTTTGTTTTGCTATTCGTTGGCGTCTTTCTTAGCAGCTTTGGCTCGACCGCTAACCCGCAAATGTTTGCCCTTGCCCGTGAACATGCCGACAAAACCGGACGTGAGGCGGTGATGTTCAGCTCTTTTTTACGCGCTCAGGTTTCACTGGCATGGGTCATTGGCCCACCGCTGGCTTATGCCTTAGCGATGGGTTTCAGCTTTACGGTAATGTATCTGAGCGCAGCGGTAGCGTTTATTGTTTGCGGTGTGATGGTGTGGCTGTTTTTACCGTCGATGCGAAAAGAGCTTCCGCTGGCGACCGGCACGATCGAAGCGCCGCGCCGTAACCGTCGCGATACGCTGCTGCTGTTTGTCATTTGTACATTGATGTGGGGCTCGAACAGCCTGTACATCATCAACATGCCGCTATTTATTATCAACGAACTGCATCTTCCCGAGAAACTGGCCGGTGTGATGATGGGGACCGCCGCCGGGCTGGAAATCCCGACGATGTTGATTGCCGGATATTTCGCCAAACGTCTGGGTAAGCGTTTCTTAATGCGCGTTGCTGCCGTGGGTGGCGTCTGTTTTTACGCAGGAATGCTGATGGCGCATTCACCTGTCATTCTGTTGGGCTTGCAGCTGCTAAATGCTATTTTTATTGGCATTCTGGGCGGCATCGGGATGCTCTATTTTCAGGATCTGATGCCCGGTCAGGCGGGTTCAGCCACCACGCTCTATACCAACACTTCGCGCGTGGGCTGGATCATCGCAGGATCAGTGGCGGGCATCGTCGCCGAGATCTGGAATTATCACGCTGTGTTCTGGTTTGCGATGGTGATGATTATCGCCACTCTGTTTTGCTTACTGCGGATTAAAGATGTTTAA", - "dna_sequence_length": 1182, - "functions": [ - "lactose/glucose efflux system" - ], - "id": "CDS_2155", - "location": [ - [ - "NC_000913", - 2263863, - "+", - 1182 - ] - ], - "md5": "e6d5933e8c569237f732e05f42703e2f", - "parent_gene": "", - "protein_md5": "a1ab8b2028016f8c6fd272e25bca9ba4", - "protein_translation": "MHNSPAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATGTIEAPRRNRRDTLLLFVICTLMWGSNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVGGVCFYAGMLMAHSPVILLGLQLLNAIFIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSVAGIVAEIWNYHAVFWFAMVMIIATLFCLLRIKDV", - "protein_translation_length": 393, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5361" - ], - [ - "gene_synonym", - "ECK2164" - ], - [ - "gene_synonym", - "YP_588461.1" - ], - [ - "gene_synonym", - "GeneID:4056031" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFT8" - ], - [ - "gene_synonym", - "EcoGene:EG14375" - ], - [ - "gene_synonym", - "GI:94541118" - ], - [ - "gene_synonym", - "ASAP:ABE-0285016" - ], - [ - "gene_synonym", - "yeiW" - ], - [ - "gene_synonym", - "b4502" - ] - ], - "dna_sequence": "ATGGAATGCCGTCCGGGTTGCGGGGCGTGTTGCACTGCCCCTTCAATTTCCAGCCCTATTCCCGGTATGCCAGATGGCAAGCCCGCCAATACGCCCTGCATTCAGCTTGATGAACAGCAACGCTGTAAAATTTTCACCTCGCCACTGCGACCGAAAGTCTGTGCAGGCTTACAAGCCAGCGCTGAAATGTGCGGTAACTCGCGTCAGCAGGCCATGACCTGGCTTATCGATCTGGAAATGCTGACCGCGCCTTAA", - "dna_sequence_length": 255, - "functions": [ - "UPF0153 cysteine cluster protein" - ], - "id": "CDS_2156", - "location": [ - [ - "NC_000913", - 2265295, - "-", - 255 - ] - ], - "md5": "569f250c61811039621dea8553b4cd67", - "parent_gene": "", - "protein_md5": "dba544ddbc138316162a3bb53f91d15e", - "protein_translation": "MECRPGCGACCTAPSISSPIPGMPDGKPANTPCIQLDEQQRCKIFTSPLRPKVCAGLQASAEMCGNSRQQAMTWLIDLEMLTAP", - "protein_translation_length": 84, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5362" - ], - [ - "gene_synonym", - "ECK2165" - ], - [ - "gene_synonym", - "GeneID:946674" - ], - [ - "gene_synonym", - "EcoGene:EG12035" - ], - [ - "gene_synonym", - "ASAP:ABE-0007187" - ], - [ - "gene_synonym", - "NP_416676.4" - ], - [ - "gene_synonym", - "GI:90111399" - ], - [ - "gene_synonym", - "b2171" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6N8" - ], - [ - "gene_synonym", - "yeiP" - ] - ], - "dna_sequence": "ATGCCAAGAGCGAACGAAATTAAAAAAGGTATGGTACTGAATTACAACGGCAAACTGCTGCTGGTTAAGGATATTGATATTCAGTCGCCCACTGCCCGCGGTGCCGCTACGCTGTACAAAATGCGTTTTTCTGATGTCCGTACCGGGCTGAAAGTAGAAGAGCGTTTCAAAGGTGATGATATCGTTGACACCGTGACGCTGACCCGCCGTTACGTTGACTTCTCCTATGTCGATGGCAACGAATATGTCTTTATGGATAAAGAAGACTATACCCCGTATACCTTCACCAAAGATCAGATTGAAGAAGAGTTGCTGTTTATGCCAGAGGGCGGCATGCCGGACATGCAGGTGCTGACCTGGGACGGTCAACTGCTGGCGCTTGAGCTGCCGCAGACCGTTGATCTGGAAATCGTTGAAACCGCACCAGGCATCAAAGGGGCATCTGCCAGCGCCCGTAACAAACCGGCGACATTGAGCACTGGTCTGGTGATTCAGGTACCAGAATACTTAAGCCCGGGCGAAAAAATTCGTATCCATATCGAAGAACGCCGTTATATGGGGCGTGCTGACTAA", - "dna_sequence_length": 573, - "functions": [ - "elongation factor P-like protein" - ], - "id": "CDS_2157", - "location": [ - [ - "NC_000913", - 2265450, - "+", - 573 - ] - ], - "md5": "033906a2d31d7237779ff342184379fe", - "parent_gene": "", - "protein_md5": "d0f6208c7ec49867d6a18499e56be373", - "protein_translation": "MPRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFSDVRTGLKVEERFKGDDIVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEEELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLSTGLVIQVPEYLSPGEKIRIHIEERRYMGRAD", - "protein_translation_length": 190, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130110" - ], - [ - "gene_synonym", - "GeneID:946688" - ], - [ - "gene_synonym", - "ECK2166" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33029" - ], - [ - "gene_synonym", - "NP_416677.1" - ], - [ - "gene_synonym", - "b2172" - ], - [ - "gene_synonym", - "EcoGene:EG12036" - ], - [ - "gene_synonym", - "JW2160" - ], - [ - "gene_synonym", - "yeiQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0007191" - ] - ], - "dna_sequence": "ATGAATACAATCGCCTCCGTTACGCTCCCGCATCATGTACACGCTCCACGCTATGATCGCCAGCAGTTGCAATCACGTATCGTTCATTTTGGCTTTGGAGCCTTTCACCGCGCTCATCAGGCGTTACTGACCGATCGTGTGCTGAATGCCCAGGGCGGCGACTGGGGGATCTGTGAAATCAGCTTGTTCAGCGGTGATCAACTGATGAGCCAGCTCCGCGCACAGAACCATTTATATACCGTGCTGGAGAAAGGTGCGGACGGCAATCAGGTGATAATTGTCGGTGCCGTTCACGAATGCCTTAATGCAAAACTGGATTCCTTAGCGGCAATTATTGAGAAATTTTGCGAGCCACAGGTGGCAATTGTTTCCCTGACGATTACCGAAAAAGGCTATTGTATTGACCCGGCCACCGGTGCACTCGACACCAGTAATCCGCGGATTATTCACGATCTACAAACCCCTGAAGAACCTCACTCCGCACCGGGTATTCTCGTCGAAGCACTGAAACGCCGCCGTGAGCGCGGCCTTACACCGTTTACCGTGCTCTCCTGCGACAATATTCCCGACAATGGTCATGTGGTGAAAAACGCGGTGCTGGGAATGGCAGAAAAACGTTCGCCAGAACTCGCCGGGTGGATAAAAGAGCACGTCAGTTTTCCGGGAACCATGGTCGACCGCATTGTTCCGGCTGCAACCGACGAATCACTGGTGGAAATCAGCCAGCATCTGGGGGTGAATGATCCCTGCGCGATTAGCTGCGAACCGTTTATCCAGTGGGTGGTGGAAGATAACTTCGTCGCTGGGCGTCCTGCCTGGGAAGTCGCAGGTGTACAAATGGTGAATGATGTCCTGCCATGGGAAGAGATGAAACTGCGGATGCTTAATGGCAGCCACTCTTTTCTCGCTTATCTGGGTTACCTCTCAGGATTCGCCCATATCAGTGATTGCATGCAGGATCGCGCATTTCGCCATGCCGCCAGAACATTAATGCTGGATGAGCAAGCGCCGACACTGCAAATTAAAGATGTCGATTTAACACAATATGCGGATAAGTTAATTGCACGTTTTGCTAATCCGGCGCTGAAACATAAGACCTGGCAAATCGCGATGGATGGCAGCCAGAAATTACCGCAACGCATGCTGGCAGGTATTCGCATACATCAGGGGCGCGAAACGGACTGGTCGTTGCTGGCATTAGGCGTTGCAGGCTGGATGCGTTACGTCAGCGGCGTTGATGATGCCGGAAATGCCATTGATGTTCGCGATCCGCTTAGCGATAAAATTCGCGAACTTGTTGCGGGCAGCAGCAGTGAACAACGCGTAACCGCCCTGCTTTCCCTGCGTGAAGTTTTCGGTGATGATCTGCCAGATAACCCGCATTTTGTGCAGGCCATCGAACAAGCCTGGCAACAAATCGTACAATTCGGCGCACATCAGGCGCTATTAAACACCCTCAAAATTTAA", - "dna_sequence_length": 1467, - "functions": [ - "putative NAD-dependent D-mannonate oxidoreductase" - ], - "id": "CDS_2158", - "location": [ - [ - "NC_000913", - 2266245, - "+", - 1467 - ] - ], - "md5": "00586526be86f0c10c38f922de53884c", - "parent_gene": "", - "protein_md5": "0464de5937917f8125037a4cde875953", - "protein_translation": "MNTIASVTLPHHVHAPRYDRQQLQSRIVHFGFGAFHRAHQALLTDRVLNAQGGDWGICEISLFSGDQLMSQLRAQNHLYTVLEKGADGNQVIIVGAVHECLNAKLDSLAAIIEKFCEPQVAIVSLTITEKGYCIDPATGALDTSNPRIIHDLQTPEEPHSAPGILVEALKRRRERGLTPFTVLSCDNIPDNGHVVKNAVLGMAEKRSPELAGWIKEHVSFPGTMVDRIVPAATDESLVEISQHLGVNDPCAISCEPFIQWVVEDNFVAGRPAWEVAGVQMVNDVLPWEEMKLRMLNGSHSFLAYLGYLSGFAHISDCMQDRAFRHAARTLMLDEQAPTLQIKDVDLTQYADKLIARFANPALKHKTWQIAMDGSQKLPQRMLAGIRIHQGRETDWSLLALGVAGWMRYVSGVDDAGNAIDVRDPLSDKIRELVAGSSSEQRVTALLSLREVFGDDLPDNPHFVQAIEQAWQQIVQFGAHQALLNTLKI", - "protein_translation_length": 488, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130111" - ], - [ - "gene_synonym", - "b2173" - ], - [ - "gene_synonym", - "ECK2167" - ], - [ - "gene_synonym", - "EcoGene:EG12104" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33030" - ], - [ - "gene_synonym", - "GeneID:946701" - ], - [ - "gene_synonym", - "JW2161" - ], - [ - "gene_synonym", - "NP_416678.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007194" - ], - [ - "gene_synonym", - "yeiR" - ] - ], - "dna_sequence": "GTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCAGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTCGGAATTGATGGTGCTTTGCTCGCCGATAGCGGCGCATTGCTGAAAGAGATCCCCGGCGGCTGCATGTGCTGCGTTAATGGTTTACCCATGCAGGTAGGGTTGAATACCTTACTGCGTCAGGGAAAACCAGACCGCTTGTTGATAGAGCCGACCGGGCTGGGCCATCCGAAACAGATCCTCGATCTGTTAACCGCACCAGTCTATGAACCGTGGATAGATCTGCGCGCCACCTTGTGCATTCTCGATCCGCGCTTGCTGCTGGACGAAAAAAGCGCCAGCAATGAAAACTTCCGTGACCAGCTGGCTGCCGCAGACATCATTGTCGCCAATAAATCCGACCGTACGACGCCCGAAAGTGAGCAAGCGCTACAGCGTTGGTGGCAGCAAAATGGTGGCGATCGACAATTAATTCACAGTGAGCATGGGAAAGTTGACGGTCATCTTCTGGATTTGCCGCGTCGCAATTTAGCCGAGTTGCCCGCCAGCGCCGCGCATTCTCATCAGCATGTCGTGAAAAAAGGGTTAGCAGCGTTAAGCCTGCCAGAGCATCAACGCTGGCGTCGCAGTCTGAACAGCGGGCAAGGATATCAGGCCTGCGGCTGGATATTCGACGCTGATACGGTATTCGACACCATTGGCATTCTGGAATGGGCGCGACTTGCACCGGTGGAACGCGTCAAAGGCGTGCTGCGTATTCCCGAAGGGCTGGTGCGAATCAACCGTCAGGGCGATGACCTGCACATTGAAACGCAAAACGTTGCGCCACCGGACAGCCGTATTGAGCTGATTTCCAGCAGCGAAGCTGACTGGAATGCCTTGCAGAGCGCGCTGTTGAAGCTTCGTTTAGCGACTACCGCGTAA", - "dna_sequence_length": 987, - "functions": [ - "Zn-stimulated GTPase involved in zinc homeostasis", - "mutants are cadmium and EDTA sensitive", - "Zn(2+) binding protein" - ], - "id": "CDS_2159", - "location": [ - [ - "NC_000913", - 2267829, - "+", - 987 - ] - ], - "md5": "2d53e1ecbdc33a7845afbd0d99c30bd6", - "parent_gene": "", - "protein_md5": "064d885e0acb6092a6432757cd898ed3", - "protein_translation": "MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWAVLVNEFGEVGIDGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQILDLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRTTPESEQALQRWWQQNGGDRQLIHSEHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLAALSLPEHQRWRRSLNSGQGYQACGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPEGLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALLKLRLATTA", - "protein_translation_length": 328, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2174" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76445" - ], - [ - "gene_synonym", - "ECK2168" - ], - [ - "gene_synonym", - "GI:90111400" - ], - [ - "gene_synonym", - "JW2162" - ], - [ - "gene_synonym", - "ASAP:ABE-0007196" - ], - [ - "gene_synonym", - "EcoGene:EG14075" - ], - [ - "gene_synonym", - "GeneID:946693" - ], - [ - "gene_synonym", - "yeiU" - ], - [ - "gene_synonym", - "NP_416679.4" - ], - [ - "gene_synonym", - "lpxT" - ] - ], - "dna_sequence": "ATGATTAAAAATTTGCCGCAAATAGTGTTGTTGAATATTGTCGGCCTCGCGCTGTTTCTTTCCTGGTATATCCCCGTTAATCATGGATTCTGGTTGCCGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATTGGTCTGGTCATGCTATTAACTGCAGTGGTATTAAACCAGCTGGGTCAGGCATTAATTCCTGTAAAACGGGCCAGCCCAACATTGACTTTTACCGATATTAACCGCGTCAGCGAACTGCTCTCTGTTCCCACGAAAGATGCCTCACGAGATAGCTTTCCCGGCGATCACGGCATGATGCTGCTTATTTTTTCGGCATTCATGTGGCGTTATTTCGGCAAAGTTGCAGGCCTTATCGCCCTTATTATTTTTGTGGTTTTTGCATTTCCCAGAGTAATGATTGGCGCACACTGGTTTACTGACATCATTGTCGGTTCGATGACCGTGATATTGATCGGTTTGCCCTGGGTGTTGCTGACGCCATTAAGTGATCGATTAATCACCTTTTTTGACAAATCACTACCAGGAAAAAACAAACATTTCCAAAACAAATAA", - "dna_sequence_length": 714, - "functions": [ - "lipid A 1-diphosphate synthase", - "undecaprenyl pyrophosphate:lipid A 1-phosphate phosphotransferase" - ], - "id": "CDS_2160", - "location": [ - [ - "NC_000913", - 2268854, - "+", - 714 - ] - ], - "md5": "dda5ead5fdb3a25940bfbe7d36742f32", - "parent_gene": "", - "protein_md5": "26fe1857db9e287a61c88f1fb8b185cb", - "protein_translation": "MIKNLPQIVLLNIVGLALFLSWYIPVNHGFWLPIDADIFYFFNQKLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTAVVLNQLGQALIPVKRASPTLTFTDINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAFMWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDRLITFFDKSLPGKNKHFQNK", - "protein_translation_length": 237, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2175" - ], - [ - "gene_synonym", - "GI:16130113" - ], - [ - "gene_synonym", - "ECK2169" - ], - [ - "gene_synonym", - "spr" - ], - [ - "gene_synonym", - "ASAP:ABE-0007200" - ], - [ - "gene_synonym", - "JW2163" - ], - [ - "gene_synonym", - "NP_416680.1" - ], - [ - "gene_synonym", - "EcoGene:EG14076" - ], - [ - "gene_synonym", - "mepS" - ], - [ - "gene_synonym", - "yeiV" - ], - [ - "gene_synonym", - "GeneID:946686" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFV4" - ] - ], - "dna_sequence": "ATGGTCAAATCTCAACCGATTTTGAGATATATCTTGCGCGGGATTCCCGCGATTGCAGTAGCGGTTCTGCTTTCTGCATGTAGTGCAAATAACACCGCAAAGAATATGCATCCTGAGACACGTGCAGTGGGTAGTGAAACATCATCACTGCAAGCTTCTCAGGATGAATTTGAAAACCTGGTTCGTAATGTCGACGTAAAATCGCGAATTATGGATCAGTATGCTGACTGGAAAGGCGTACGTTATCGTCTGGGCGGCAGCACTAAAAAAGGTATCGATTGTTCTGGTTTCGTACAGCGTACATTCCGTGAGCAATTTGGCTTAGAACTTCCGCGTTCGACTTACGAACAGCAGGAAATGGGTAAATCTGTTTCCCGCAGTAATTTGCGTACGGGTGATTTAGTTCTGTTCCGTGCCGGTTCAACGGGACGCCATGTCGGTATTTATATCGGCAACAATCAGTTTGTCCATGCTTCCACCAGCAGTGGTGTTATTATTTCCAGCATGAATGAACCGTACTGGAAGAAGCGTTACAACGAAGCACGCCGGGTTCTCAGCCGCAGCTAA", - "dna_sequence_length": 567, - "functions": [ - "murein DD-endopeptidase, space-maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD-carboxypeptidase" - ], - "id": "CDS_2161", - "location": [ - [ - "NC_000913", - 2269979, - "+", - 567 - ] - ], - "md5": "ac94e8b636381c02b4942e0ca09b6459", - "parent_gene": "", - "protein_md5": "f49f9ea811d89e701c0cc9d9a464363a", - "protein_translation": "MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVGSETSSLQASQDEFENLVRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRVLSRS", - "protein_translation_length": 188, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76446" - ], - [ - "gene_synonym", - "b2176" - ], - [ - "gene_synonym", - "GI:16130114" - ], - [ - "gene_synonym", - "ASAP:ABE-0007203" - ], - [ - "gene_synonym", - "JW2164" - ], - [ - "gene_synonym", - "rtn" - ], - [ - "gene_synonym", - "ECK2170" - ], - [ - "gene_synonym", - "EcoGene:EG14077" - ], - [ - "gene_synonym", - "GeneID:946695" - ], - [ - "gene_synonym", - "NP_416681.1" - ] - ], - "dna_sequence": "ATGTTCATACGCGCTCCCAATTTTGGACGTAAGCTCCTGCTTACCTGCATTGTTGCAGGCGTAATGATTGCGATACTGGTGAGTTGCCTTCAGTTTTTAGTGGCCTGGCATAAGCACGAAGTCAAATACGACACACTGATTACCGACGTACAAAAGTATCTCGATACCTATTTTGCCGACCTGAAATCCACTACTGACCGGCTCCAGCCGCTGACCTTAGATACCTGCCAGCAAGCTAACCCCGAACTGACCGCCCGCGCAGCGTTTAGCATGAATGTCCGAACGTTTGTGCTGGTGAAAGATAAAAAAACATTCTGTTCATCTGCGACCGGTGAGATGGACATTCCACTCAATGAATTGATTCCGGCGCTCGACATTAATAAAAACGTCGATATGGCGATCTTACCCGGCACGCCGATGGTGCCGAACAAACCCGCAATCGTCATCTGGTATCGCAACCCTTTGCTGAAAAATAGCGGCGTCTTTGCCGCTCTGAATCTCAACCTGACGCCTTCACTCTTTTATAGTTCACGGCAGGAAGATTACGATGGCGTCGCCCTCATTATTGGCAATACTGCGCTATCTACCTTTTCTTCACGTTTGATGAACGTTAACGAATTAACCGACATGCCAGTCCGTGAAACTAAAATTGCGGGCATTCCTCTGACCGTTCGGCTTTATGCAGATGACTGGACATGGAACGATGTGTGGTACGCATTTTTACTGGGCGGCATGAGTGGAACTGTCGTTGGCCTGCTCTGCTATTACCTGATGAGCGTACGTATGCGCCCCGGCAGAGAAATCATGACCGCCATCAAGCGCGAACAATTTTACGTGGCGTATCAACCGGTGGTGGATACACAAGCTTTGCGAGTAACGGGCCTGGAAGTACTGCTACGCTGGCGGCATCCTGTCGCGGGAGAAATTCCCCCGGATGCCTTCATTAACTTTGCCGAATCGCAAAAGATGATTGTGCCGCTGACTCAGCACCTGTTTGAGTTAATTGCCCGCGATGCCGCAGAATTAGAAAAAGTGCTGCCGGTAGGCGTCAAATTTGGTATTAACATTGCGCCGGACCATCTGCACAGCGAAAGCTTTAAAGCAGATATCCAGAAACTGCTCACTTCCCTGCCCGCACACCATTTCCAGATTGTGCTGGAAATTACCGAGCGCGATATGTTGAAAGAGCAAGAAGCCACACAACTCTTCGCCTGGCTGCACTCGGTCGGCGTAGAAATTGCTATTGATGACTTCGGCACCGGGCACAGCGCGCTTATCTATCTTGAGCGTTTTACGCTCGATTATCTGAAAATTGACCGTGGATTTATCAACGCCATCGGTACGGAAACGATCACTTCCCCCGTACTTGACGCGGTGCTGACGCTGGCGAAACGCCTCAATATGCTGACGGTTGCTGAAGGGGTCGAAACGCCGGAACAGGCGCGATGGCTAAGCGAACGCGGCGTTAATTTCATGCAAGGCTACTGGATTAGCCGCCCGTTACCGCTGGACGATTTTGTTCGCTGGCTAAAGAAACCGTATACGCCGCAGTGGTAA", - "dna_sequence_length": 1557, - "functions": [ - "resistance protein for phages lambda and N4, putative membrane-anchored cyclic-di-GMP phosphodiesterase" - ], - "id": "CDS_2162", - "location": [ - [ - "NC_000913", - 2270726, - "+", - 1557 - ] - ], - "md5": "302e3b9adc3b67463602be17f5046a02", - "parent_gene": "", - "protein_md5": "0fb8af4a1257bc7907737a8b84a58318", - "protein_translation": "MFIRAPNFGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYDTLITDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDKKTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSGVFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIAGIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQFYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFELIARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERDMLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRWLKKPYTPQW", - "protein_translation_length": 518, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2177" - ], - [ - "gene_synonym", - "GeneID:946675" - ], - [ - "gene_synonym", - "yejA" - ], - [ - "gene_synonym", - "NP_416682.4" - ], - [ - "gene_synonym", - "GI:90111401" - ], - [ - "gene_synonym", - "JW2165" - ], - [ - "gene_synonym", - "EcoGene:EG12037" - ], - [ - "gene_synonym", - "ASAP:ABE-0007206" - ], - [ - "gene_synonym", - "ECK2171" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33913" - ] - ], - "dna_sequence": "ATGATTGTGCGCATACTGCTGCTGTTTATCGCTCTGTTCACCTTTGGTGTGCAGGCGCAGGCTATCAAGGAAAGCTATGCCTTTGCCGTGCTGGGCGAACCCCGGTACGCGTTTAATTTCAACCATTTTGATTATGTGAACCCCGCCGCGCCAAAAGGTGGGCAGATAACGTTGTCAGCCCTCGGCACCTTCGATAATTTCAACCGCTATGCACTGCGCGGCAACCCGGGCGCACGCACCGAGCAGCTGTACGACACGCTATTTACGACTTCCGATGACGAACCAGGCAGTTATTACCCGCTGATTGCTGAAAGCGCACGCTATGCTGACGATTATTCCTGGGTGGAGGTCGCTATTAATCCGCGCGCCCGTTTTCATGATGGTTCGCCCATTACTGCCCGCGATGTAGAGTTTACTTTTCAAAAATTTATGACCGAAGGCGTGCCGCAATTTCGTCTGGTCTACAAAGGCACCACCGTCAAAGCCATTGCACCGTTAACCGTGCGCATTGAGTTAGCTAAACCCGGCAAAGAAGATATGCTGAGTCTGTTTTCGCTGCCGGTATTTCCAGAAAAGTACTGGAAGGATCACAAACTTAGCGACCCGCTCGCCACGCCTCCGCTTGCCAGTGGTCCGTACCGCGTTACGTCCTGGAAAATGGGGCAAAATATTGTCTATTCCCGTGTGAAAGATTACTGGGCAGCAAACTTACCGGTAAACCGTGGACGCTGGAATTTCGACACCATTCGCTACGATTATTACCTCGATGATAATGTCGCCTTTGAAGCGTTTAAAGCAGGTGCCTTTGATTTGCGTATGGAAAACGACGCCAAAAACTGGGCCACGCGTTATACCGGTAAAAATTTCGATAAAAAATACATCATCAAAGATGAGCAAAAGAACGAATCAGCCCAGGATACGCGTTGGCTGGCGTTTAATATCCAACGTCCGGTATTCAGCGATCGCCGGGTCCGGGAAGCTATCACTCTCGCCTTTGACTTTGAATGGATGAACAAGGCGTTGTTTTACAATGCCTGGAGTCGCACGAACAGTTATTTTCAGAATACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATGAAAAAAGATCTACCGTCAGAAGTCTTCACACAAATCTACCAGCCGCCGGTATCCAAAGGCGATGGCTACGATCGTGACAACCTGTTAAAAGCCGACAAACTTCTCAACGAAGCGGGCTGGGTGCTGAAGGGTCAGCAACGCGTTAATGCCACAACGGGTCAGCCACTCAGCTTTGAATTATTGCTTCCCGCAAGCAGCAATAGTCAGTGGGTATTGCCGTTCCAGCACAGCCTGCAACGGCTGGGTATCAACATGGACATTCGCAAGGTGGATAACTCGCAAATCACTAACCGCATGCGCAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCGGCGTGCAAAGCCCGGTTATCGACTCGCTGATCAACCAAATTATTGCCGCGCAGGGAAATAAAGAAAAATTACTGCCGTTGGGGCGAGCACTGGATCGCGTATTAACGTGGAATTATTACATGCTGCCAATGTGGTACATGGCGGAAGACCGTCTCGCCTGGTGGGATAAATTCTCCCAGCCGGCCGTGCGCCCCATCTATAGCCTCGGTATCGATACCTGGTGGTATGACGTCAATAAAGCGGCCAAACTGCCGTCCGCCAGCAAACAGGGAGAGTAG", - "dna_sequence_length": 1815, - "functions": [ - "microcin C ABC transporter periplasmic binding protein" - ], - "id": "CDS_2163", - "location": [ - [ - "NC_000913", - 2272364, - "+", - 1815 - ] - ], - "md5": "30259b9434963f5dca4e1e513b874f6a", - "parent_gene": "", - "protein_md5": "93f74aac8e5e975c78eca45e4860eacd", - "protein_translation": "MIVRILLLFIALFTFGVQAQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSWKMGQNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPSEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDNSQITNRMRSRDYDMMPRVWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPIYSLGIDTWWYDVNKAAKLPSASKQGE", - "protein_translation_length": 604, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007208" - ], - [ - "gene_synonym", - "GI:16130116" - ], - [ - "gene_synonym", - "yejB" - ], - [ - "gene_synonym", - "EcoGene:EG12038" - ], - [ - "gene_synonym", - "JW2166" - ], - [ - "gene_synonym", - "ECK2172" - ], - [ - "gene_synonym", - "b2178" - ], - [ - "gene_synonym", - "NP_416683.1" - ], - [ - "gene_synonym", - "GeneID:946679" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFU0" - ] - ], - "dna_sequence": "ATGGGCGCTTACCTGATTCGCCGTCTGTTGCTGGTGATCCCAACATTATGGGCGATTATCACCATCAACTTTTTCATCGTGCAAATTGCGCCTGGCGGTCCGGTCGACCAGGCCATCGCCGCCATTGAGTTTGGTAATGCCGGAGTATTACCCGGCGCAGGCGGTGAAGGTGTTCGTGCCAGCCATGCGCAAACGGGTGTCGGCAATATCAGCGACAGTAATTACCGTGGCGGACGCGGATTAGATCCAGAAGTGATCGCTGAGATCACTCATCGCTACGGTTTTGATAAGCCGATCCACGAACGTTACTTCAAAATGCTCTGGGACTACATCCGCTTTGATTTTGGCGATAGCCTGTTTCGCAGCGCCTCGGTGCTGACGCTGATTAAAGACAGTCTGCCGGTTTCCATCACCCTCGGATTGTGGAGCACGCTGATTATCTATCTGGTGTCGATTCCGTTAGGCATTCGCAAAGCTGTTTATAATGGGAGCCGCTTTGACGTCTGGAGTAGCGCATTTATCATCATCGGCTACGCCATTCCGGCCTTTTTGTTTGCCATCCTGCTGATTGTCTTCTTCGCGGGCGGCAGCTATTTCGACCTGTTCCCTCTACGCGGCCTGGTTTCCGCTAACTTTGATTCGCTGCCGTGGTATCAGAAAATCACCGATTATCTGTGGCATATCACGCTGCCGGTGCTGGCGACAGTGATTGGTGGCTTTGCGGCGCTGACCATGCTGACAAAAAACTCATTCCTTGATGAAGTGCGCAAGCAATACGTGGTGACCGCGCGTGCGAAAGGGGTAAGTGAAAAAAATATTCTCTGGAAACATGTGTTCCGCAACGCCATGCTGCTGGTGATTGCCGGTTTTCCGGCGACGTTTATCAGCATGTTTTTTACCGGCTCGCTGCTGATTGAGGTGATGTTTTCACTCAATGGTCTGGGCTTACTGGGCTACGAAGCGACCGTCTCGCGCGATTATCCTGTAATGTTTGGTACCTTGTATATTTTCACCCTGATTGGCCTGCTGCTGAATATTGTCAGTGATATCAGCTATACGCTGGTTGATCCGCGTATTGATTTTGAGGGACGTTAA", - "dna_sequence_length": 1095, - "functions": [ - "microcin C ABC transporter permease" - ], - "id": "CDS_2164", - "location": [ - [ - "NC_000913", - 2274179, - "+", - 1095 - ] - ], - "md5": "add18e6c2c1e2cfe382c58d43ef57ceb", - "parent_gene": "", - "protein_md5": "ca378b7f66bed154a8d0d51b494fd345", - "protein_translation": "MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGNAGVLPGAGGEGVRASHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHERYFKMLWDYIRFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVYNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWYQKITDYLWHITLPVLATVIGGFAALTMLTKNSFLDEVRKQYVVTARAKGVSEKNILWKHVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNIVSDISYTLVDPRIDFEGR", - "protein_translation_length": 364, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yejE" - ], - [ - "gene_synonym", - "GI:16130117" - ], - [ - "gene_synonym", - "ASAP:ABE-0007210" - ], - [ - "gene_synonym", - "JW2167" - ], - [ - "gene_synonym", - "b2179" - ], - [ - "gene_synonym", - "ECK2173" - ], - [ - "gene_synonym", - "EcoGene:EG12040" - ], - [ - "gene_synonym", - "GeneID:946683" - ], - [ - "gene_synonym", - "NP_416684.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33915" - ] - ], - "dna_sequence": "ATGTCGCGACTCAGCCCCGTCAATCAGGCCCGTTGGGCGCGTTTTCGTCATAACCGTCGCGGCTACTGGTCGTTATGGATTTTCCTCGTCTTGTTTGGTTTGAGTTTGTGTTCTGAACTTATCGCCAACGATAAACCGTTGCTGGTGCGTTATGACGGCAGTTGGTATTTCCCGTTATTGAAAAACTACAGCGAAAGCGATTTTGGCGGCCCGCTGGCAAGTCAGGCTGATTATCAGGACCCGTGGCTGAAACAACGGCTGGAAAATAACGGCTGGGTACTGTGGGCACCGATTCGCTTTGGTGCTACCAGTATCAACTTTGCTACCAATAAGCCCTTCCCTTCTCCACCCTCCCGGCAAAACTGGCTGGGAACGGATGCCAACGGCGGCGATGTGCTGGCACGCATTCTCTATGGCACGCGGATCTCGGTTCTGTTTGGCCTGATGCTGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCGCAGTATCATCCTGCGTCATATGTTGCCTAATGCCATGGTCGCGACCCTCACCTTTTTACCGTTTATTTTATGTAGTTCGATAACCACCCTGACCTCGCTCGATTTCCTCGGCTTCGGTCTACCGCTCGGTTCACCGTCACTCGGTGAACTGCTGTTACAAGGGAAAAATAACCTTCAGGCCCCGTGGCTTGGGATCACCGCCTTCTTGTCGGTGGCGATATTATTGTCTTTGCTGATCTTTATTGGTGAAGCCGTCCGCGACGCATTTGATCCTAATAAGGCGGTGTAG", - "dna_sequence_length": 1026, - "functions": [ - "microcin C ABC transporter permease" - ], - "id": "CDS_2165", - "location": [ - [ - "NC_000913", - 2275273, - "+", - 1026 - ] - ], - "md5": "3f9c46ff3068c2224d2b8d3088ae15d0", - "parent_gene": "", - "protein_md5": "297645d47d27689c4696861880d15b1b", - "protein_translation": "MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIANDKPLLVRYDGSWYFPLLKNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGATSINFATNKPFPSPPSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVLAGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDAFDPNKAV", - "protein_translation_length": 341, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yejF" - ], - [ - "gene_synonym", - "GeneID:946689" - ], - [ - "gene_synonym", - "JW2168" - ], - [ - "gene_synonym", - "b2180" - ], - [ - "gene_synonym", - "GI:16130118" - ], - [ - "gene_synonym", - "EcoGene:EG12041" - ], - [ - "gene_synonym", - "NP_416685.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007212" - ], - [ - "gene_synonym", - "ECK2174" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33916" - ] - ], - "dna_sequence": "ATGACGCAAACTCTGTTAGCGATTGAAAATTTGTCGGTGGGTTTTCGCCATCAGCAAACCGTACGTACAGTAGTCAATGATGTTTCACTACAGATTGAGGCTGGCGAAACGCTGGCGCTGGTGGGTGAGTCAGGTTCAGGCAAAAGCGTTACCGCGCTGTCAATTTTACGCCTGCTCCCTTCCCCGCCGGTTGAATATCTCTCCGGCGATATTCGTTTTCATGGCGAATCGCTGCTTCACGCCAGCGATCAAACGTTGCGCGGTGTACGCGGTAATAAGATCGCCATGATTTTTCAGGAACCGATGGTGTCGTTAAATCCATTGCATACCCTGGAAAAACAGCTTTATGAAGTGCTTTCACTCCACCGCGGGATGCGTCGGGAAGCGGCTCGTGGCGAAATTCTTAACTGCCTTGATCGCGTTGGTATCCGCCAGGCGGCAAAACGGCTGACAGATTATCCGCATCAGCTCTCCGGCGGCGAACGGCAGCGGGTGATGATTGCGATGGCGCTGTTAACGCGACCGGAATTATTAATTGCCGATGAACCGACCACCGCACTGGACGTCTCTGTCCAGGCGCAGATTTTACAGCTGTTGCGCGAACTGCAAGGCGAGCTGAATATGGGCATGCTGTTTATTACTCATAACCTCAGCATTGTCAGAAAACTGGCCCACCGCGTGGCGGTAATGCAAAACGGTCGCTGTGTCGAGCAAAATTACGCCGCTACGCTATTTGCATCACCCACTCATCCTTACACACAAAAGCTACTCAACAGTGAACCGTCAGGCGATCCAGTGCCGTTGCCAGAACCTGCCTCAACGTTGCTGGATGTTGAACAGCTTCAGGTTGCCTTCCCCATTCGCAAAGGGATTTTGAAGCGCATTGTGGATCATAATGTGGTGGTGAAAAACATCAGTTTTACGCTACGAGCGGGTGAAACACTGGGTTTAGTGGGCGAGTCCGGTTCCGGGAAAAGTACGACGGGACTGGCGCTGCTGCGACTGATTAATTCTCAGGGCAGCATCATCTTTGACGGTCAGCCACTGCAAAATTTAAATCGCCGCCAGCTGTTACCTATTCGTCATCGCATTCAGGTGGTATTTCAGGATCCAAACTCCTCGCTCAACCCACGACTCAACGTTTTGCAGATTATTGAGGAAGGCTTACGGGTTCACCAGCCGACGCTTTCTGCCGCACAACGCGAACAACAAGTGATAGCCGTGATGCATGAAGTGGGATTAGATCCTGAAACACGCCACCGTTATCCGGCGGAGTTCTCTGGTGGTCAGCGACAACGTATTGCGATTGCCAGGGCATTAATTCTTAAGCCCTCGCTGATCATACTTGATGAACCGACATCATCACTCGACAAAACGGTACAGGCGCAAATATTGACGCTATTGAAATCATTGCAACAAAAGCATCAACTGGCCTATTTGTTTATCAGCCACGATTTGCACGTTGTCCGCGCGTTATGTCATCAGGTTATCATACTGCGACAAGGGGAAGTAGTGGAACAAGGACCGTGCGCGCGCGTGTTTGCCACACCGCAGCAGGAGTATACGCGTCAGCTACTGGCGTTGAGCTGA", - "dna_sequence_length": 1590, - "functions": [ - "microcin C ABC transporter ATPase" - ], - "id": "CDS_2166", - "location": [ - [ - "NC_000913", - 2276300, - "+", - 1590 - ] - ], - "md5": "74e517ba5dd285611d480fd831bf9fec", - "parent_gene": "", - "protein_md5": "016d161b172c0e84f2e421d3d71ef91e", - "protein_translation": "MTQTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVEYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNYAATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLLDVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLALLRLINSQGSIIFDGQPLQNLNRRQLLPIRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYLFISHDLHVVRALCHQVIILRQGEVVEQGPCARVFATPQQEYTRQLLALS", - "protein_translation_length": 529, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yejG" - ], - [ - "gene_synonym", - "JW2169" - ], - [ - "gene_synonym", - "b2181" - ], - [ - "gene_synonym", - "GeneID:945319" - ], - [ - "gene_synonym", - "GI:16130119" - ], - [ - "gene_synonym", - "ASAP:ABE-0007214" - ], - [ - "gene_synonym", - "NP_416686.1" - ], - [ - "gene_synonym", - "ECK2175" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD21" - ], - [ - "gene_synonym", - "EcoGene:EG12042" - ] - ], - "dna_sequence": "GTGACTTCATTACAACTCTCAATCGTCCATCGACTGCCGCAGAACTATCGCTGGTCTGCTGGTTTCGCAGGTTCGAAGGTTGAACCGATTCCGCAAAATGGACCGTGCGGTGACAACAGCCTGGTGGCGCTTAAATTGCTTAGCCCGGATGGTGATAATGCATGGTCGGTGATGTATAAACTAAGCCAGGCGTTAAGCGACATCGAAGTTCCATGTTCGGTGCTGGAGTGTGAAGGTGAGCCGTGCCTGTTTGTAAATCGCCAGGACGAGTTTGCTGCAACATGCCGATTGAAAAATTTTGGTGTGGCAATTGCCGAACCCTTTTCAAACTACAATCCTTTTTAA", - "dna_sequence_length": 345, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2167", - "location": [ - [ - "NC_000913", - 2278237, - "-", - 345 - ] - ], - "md5": "c0ee96572103d3f59c7673496a760b9f", - "parent_gene": "", - "protein_md5": "85d110fcb691b7a499d87f98acd9e2ce", - "protein_translation": "MTSLQLSIVHRLPQNYRWSAGFAGSKVEPIPQNGPCGDNSLVALKLLSPDGDNAWSVMYKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGVAIAEPFSNYNPF", - "protein_translation_length": 114, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5363" - ], - [ - "gene_synonym", - "GI:16130120" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28246" - ], - [ - "gene_synonym", - "ECK2176" - ], - [ - "gene_synonym", - "b2182" - ], - [ - "gene_synonym", - "NP_416687.1" - ], - [ - "gene_synonym", - "bicA" - ], - [ - "gene_synonym", - "ASAP:ABE-0007221" - ], - [ - "gene_synonym", - "suxA" - ], - [ - "gene_synonym", - "sur" - ], - [ - "gene_synonym", - "GeneID:944808" - ], - [ - "gene_synonym", - "bicR" - ], - [ - "gene_synonym", - "EcoGene:EG11419" - ], - [ - "gene_synonym", - "bcr" - ] - ], - "dna_sequence": "GTGACCACCCGACAGCATTCGTCGTTTGCTATTGTTTTTATCCTTGGCCTGCTGGCCATGTTGATGCCGCTGTCGATTGATATGTATCTGCCCGCGCTACCGGTAATTTCAGCGCAGTTTGGCGTACCGGCGGGCAGTACGCAGATGACCCTCAGTACTTATATTCTGGGCTTTGCGTTGGGGCAGTTAATCTACGGGCCGATGGCAGACAGCTTCGGGCGTAAGCCGGTGGTGCTCGGCGGTACGCTGGTGTTTGCCGCCGCCGCGGTGGCGTGTGCGTTGGCAAACACCATCGATCAGCTGATTGTGATGCGTTTCTTCCACGGGCTGGCTGCGGCTGCGGCCAGCGTGGTCATTAACGCCCTGATGCGCGATATTTACCCGAAAGAAGAGTTCTCGCGGATGATGTCGTTTGTCATGCTGGTGACAACCATTGCACCGCTGATGGCACCGATAGTTGGCGGCTGGGTGCTGGTGTGGCTGAGCTGGCATTACATCTTCTGGATCCTGGCATTAGCGGCGATTCTGGCTTCGGCAATGATTTTCTTCCTGATTAAAGAAACCTTACCACCGGAGCGTCGTCAGCCATTTCACATTCGTACCACTATTGGTAACTTTGCGGCGCTGTTCCGCCATAAACGTGTCCTGAGCTACATGCTTGCCAGTGGTTTCAGCTTTGCCGGGATGTTCTCATTCTTAAGCGCCGGACCGTTTGTTTATATTGAAATTAACCACGTCGCGCCGGAAAACTTTGGTTATTACTTTGCGCTAAACATTGTTTTTCTGTTCGTGATGACCATCTTTAACAGCCGCTTCGTCCGCCGCATTGGCGCGTTAAATATGTTCCGCTCGGGGTTGTGGATACAATTTATTATGGCAGCGTGGATGGTCATCAGTGCGCTGCTGGGGCTGGGATTTTGGTCGCTGGTGGTTGGCGTTGCGGCGTTTGTGGGCTGCGTGTCGATGGTGTCATCCAATGCGATGGCGGTCATTCTTGATGAGTTTCCCCATATGGCGGGAACGGCATCTTCGCTGGCAGGAACCTTCCGTTTTGGCATAGGGGCAATTGTTGGCGCATTGCTTTCTCTTGCGACCTTTAACTCTGCATGGCCGATGATTTGGTCAATTGCATTCTGCGCAACCAGCTCCATTCTCTTCTGTCTGTACGCCAGTCGGCCGAAAAAACGGTGA", - "dna_sequence_length": 1191, - "functions": [ - "bicyclomycin/cysteine/sulfonamide efflux transporter" - ], - "id": "CDS_2168", - "location": [ - [ - "NC_000913", - 2279760, - "-", - 1191 - ] - ], - "md5": "5782e537d765303254bb84854455496e", - "parent_gene": "", - "protein_md5": "e66937b4a649fad008fbd62729aa16a5", - "protein_translation": "MTTRQHSSFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSTQMTLSTYILGFALGQLIYGPMADSFGRKPVVLGGTLVFAAAAVACALANTIDQLIVMRFFHGLAAAAASVVINALMRDIYPKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILALAAILASAMIFFLIKETLPPERRQPFHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPFVYIEINHVAPENFGYYFALNIVFLFVMTIFNSRFVRRIGALNMFRSGLWIQFIMAAWMVISALLGLGFWSLVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVGALLSLATFNSAWPMIWSIAFCATSSILFCLYASRPKKR", - "protein_translation_length": 396, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yejD" - ], - [ - "gene_synonym", - "rsuA" - ], - [ - "gene_synonym", - "ECK2177" - ], - [ - "gene_synonym", - "GI:16130121" - ], - [ - "gene_synonym", - "b2183" - ], - [ - "gene_synonym", - "JW2171" - ], - [ - "gene_synonym", - "GeneID:945378" - ], - [ - "gene_synonym", - "ASAP:ABE-0007223" - ], - [ - "gene_synonym", - "NP_416688.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA43" - ], - [ - "gene_synonym", - "EcoGene:EG12044" - ] - ], - "dna_sequence": "ATGCGACTTGATAAATTTATCGCACAGCAACTCGGCGTTAGCCGTGCTATTGCCGGGCGTGAAATCCGCGGCAATCGTGTCACCGTCGATGGCGAAATCGTCCGTAATGCAGCGTTCAAACTGCTTCCTGAACATGATGTCGCTTACGATGGCAACCCGCTGGCGCAGCAACACGGTCCACGTTACTTCATGCTCAATAAGCCTCAGGGCTATGTTTGCTCCACGGACGACCCTGATCACCCAACGGTGCTCTATTTTCTTGATGAACCGGTAGCGTGGAAACTGCATGCGGCGGGGCGGTTGGATATTGATACCACCGGTCTGGTGCTGATGACTGATGATGGTCAGTGGTCGCACCGCATTACTTCTCCGCGCCATCATTGCGAGAAGACCTATCTGGTGACACTGGAATCACCTGTAGCTGACGATACGGCAGAGCAATTTGCTAAAGGCGTGCAGCTGCATAACGAAAAAGATCTCACTAAGCCTGCGGTGCTGGAAGTGATTACCCCAACGCAGGTTCGTCTGACCATCAGCGAAGGGCGTTATCATCAGGTGAAACGCATGTTCGCCGCCGTGGGTAACCACGTGGTTGAGCTGCATCGTGAACGTATTGGCGGTATTACGCTGGATGCTGATTTAGCCCCCGGTGAATATCGTCCGTTAACTGAAGAAGAAATTGCCAGCGTCGTCTAA", - "dna_sequence_length": 696, - "functions": [ - "16S rRNA pseudouridine(516) synthase" - ], - "id": "CDS_2169", - "location": [ - [ - "NC_000913", - 2280483, - "-", - 696 - ] - ], - "md5": "f209b59bc4209d9868a321b4908709f4", - "parent_gene": "", - "protein_md5": "fa03fcb61a8edc1b5b91fad4d162279e", - "protein_translation": "MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416689.1" - ], - [ - "gene_synonym", - "ECK2178" - ], - [ - "gene_synonym", - "yejH" - ], - [ - "gene_synonym", - "EcoGene:EG12045" - ], - [ - "gene_synonym", - "b2184" - ], - [ - "gene_synonym", - "yejI" - ], - [ - "gene_synonym", - "yejJ" - ], - [ - "gene_synonym", - "JW2172" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33919" - ], - [ - "gene_synonym", - "GeneID:945529" - ], - [ - "gene_synonym", - "GI:16130122" - ], - [ - "gene_synonym", - "ASAP:ABE-0007228" - ] - ], - "dna_sequence": "ATGATTTTTACACTTCGCCCATATCAGCAAGAAGCCGTGGATGCCACGCTCAACCATTTTCGTCGTCATAAAACCCCTGCCGTTATCGTGCTGCCCACCGGCGCAGGTAAAAGCCTGGTGATAGCGGAACTGGCACGGCTGGCTCGTGGTCGCGTGCTGGTGCTGGCACACGTTAAAGAACTGGTGGCGCAAAACCATGCAAAGTATCAGGCGCTGGGGCTGGAAGCCGATATTTTTGCCGCCGGGCTAAAGCGCAAAGAGAGCCACGGTAAAGTGGTATTTGGCAGCGTGCAGTCTGTCGCCCGTAATCTTGATGCCTTTCAGGGTGAATTTTCGCTGTTGATTGTCGATGAATGTCACCGTATTGGTGACGATGAAGAGAGCCAGTATCAGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGATCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCGTTATATGATTAAACACGGCTATCTGACGCCGCCAGAACGACTGGATATGCCAGTAGTGCAATACGATTTCAGCCGCTTGCAGGCACAGAGTAACGGGCTGTTCAGCGAAGCCGATCTCAACCGTGAGCTGAAAAAACAACAACGTATTACCCCGCACATCATCAGCCAGATTATGGAGTTTGCTGCAACGCGCAAAGGGGTGATGATTTTTGCCGCGACGGTTGAACACGCAAAAGAGATTGTGGGATTACTGCCTGCCGAAGATGCAGCACTGATTACTGGCGACACCCCCGGCGCTGAGCGCGATGTGTTAATTGAAAATTTTAAAGCCCAGCGTTTTCGCTATCTGGTCAACGTCGCGGTACTGACCACCGGATTTGACGCCCCGCACGTCGATCTTATCGCCATTCTGCGCCCTACCGAATCAGTGAGTCTTTACCAACAAATTGTCGGGCGCGGTCTGCGTCTCGCTCCGGGCAAGACTGATTGCTTAATTCTTGATTATGCGGGTAATCCTCACGATCTCTACGCGCCGGAAGTTGGTACACCAAAAGGCAAAAGTGACAACGTTCCGGTACAGGTTTTCTGCCCTGCCTGCGGTTTTGCCAACACCTTTTGGGGGAAAACGACCGCCGACGGGACATTGATTGAACACTTTGGTCGTCGCTGTCAGGGATGGTTTGAAGATGACGACGGTCATCGCGAACAATGTGACTTCCGTTTCCGTTTTAAAAATTGCCCGCAATGTAACGCGGAAAACGATATTGCCGCCCGCCGCTGCCGCGAATGTGACACCGTACTGGTTGATCCGGACGATATGTTAAAAGCGGCGCTACGACTGAAAGACGCGCTGGTATTACGCTGTAGCGGCATGTCTTTGCAACATGGGCACGACGAGAAAGGCGAATGGTTGAAAATCACCTATTACGATGAAGACGGCGCGGATGTGAGTGAGCGTTTCCGTCTGCAAACACCTGCCCAGCGTACCGCCTTCGAGCAGCTTTTTATCCGCCCGCATACGCGCACACCGGGCATCCCGCTGCGCTGGATCACCGCCGCCGATATCCTCGCCCAGCAAGCCTTATTGCGACACCCGGATTTTGTCGTCGCCCGCATGAAAGGCCAGTACTGGCAGGTGCGTGAAAAAGTGTTCGATTACGAAGGTCGTTTTCGTCTGGCGCACGAATTACGCGGTTAA", - "dna_sequence_length": 1761, - "functions": [ - "putative ATP-dependent DNA or RNA helicase" - ], - "id": "CDS_2170", - "location": [ - [ - "NC_000913", - 2280632, - "+", - 1761 - ] - ], - "md5": "5eaba426647f69f4c1310658d554bdbe", - "parent_gene": "", - "protein_md5": "681d45009ca4e9951c089933f991d05e", - "protein_translation": "MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKELVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDAFQGEFSLLIVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPHIISQIMEFAATRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGAERDVLIENFKAQRFRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNPHDLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALRLKDALVLRCSGMSLQHGHDEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGIPLRWITAADILAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRLAHELRG", - "protein_translation_length": 586, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2179" - ], - [ - "gene_synonym", - "GI:16130123" - ], - [ - "gene_synonym", - "GeneID:945618" - ], - [ - "gene_synonym", - "rplY" - ], - [ - "gene_synonym", - "b2185" - ], - [ - "gene_synonym", - "JW2173" - ], - [ - "gene_synonym", - "NP_416690.1" - ], - [ - "gene_synonym", - "EcoGene:EG10885" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68919" - ], - [ - "gene_synonym", - "ASAP:ABE-0007231" - ] - ], - "dna_sequence": "ATGTTTACTATCAACGCAGAAGTACGTAAAGAGCAGGGTAAGGGTGCGAGCCGCCGCCTGCGTGCCGCTAACAAGTTCCCGGCAATCATCTACGGTGGCAAAGAAGCGCCGCTGGCTATCGAGCTGGATCACGACAAAGTCATGAACATGCAAGCTAAAGCTGAATTCTACAGCGAAGTTCTGACCATCGTTGTTGACGGTAAAGAAATCAAAGTTAAAGCTCAGGACGTACAGCGTCACCCGTACAAACCGAAGCTGCAGCACATCGACTTCGTTCGCGCTTAA", - "dna_sequence_length": 285, - "functions": [ - "50S ribosomal subunit protein L25" - ], - "id": "CDS_2171", - "location": [ - [ - "NC_000913", - 2282517, - "+", - 285 - ] - ], - "md5": "eeb78866feb24d7d923d79c2b46d20a9", - "parent_gene": "", - "protein_md5": "f4f08edd306f448c81f9dd6169c602a6", - "protein_translation": "MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA", - "protein_translation_length": 94, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416691.1" - ], - [ - "gene_synonym", - "ECK2180" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33920" - ], - [ - "gene_synonym", - "EcoGene:EG12048" - ], - [ - "gene_synonym", - "JW2174" - ], - [ - "gene_synonym", - "ASAP:ABE-0007234" - ], - [ - "gene_synonym", - "ndpA" - ], - [ - "gene_synonym", - "b2186" - ], - [ - "gene_synonym", - "yejK" - ], - [ - "gene_synonym", - "GeneID:946690" - ], - [ - "gene_synonym", - "GI:16130124" - ] - ], - "dna_sequence": "ATGAGTCTGGATATCAACCAGATTGCTCTGCACCAGCTTATCAAGCGTGATGAGCAGAACCTTGAGCTGGTGTTGCGCGATTCATTGCTGGAACCGACAGAAACCGTCGTTGAGATGGTGGCAGAACTGCATCGGGTCTATAGCGCCAAAAATAAAGCTTACGGCTTGTTTAGCGAAGAGAGTGAACTGGCGCAGACGCTGCGCTTACAGCGTCAGGGCGAAGAGGACTTCCTGGCATTTAGCCGCGCGGCAACCGGCCGCCTGCGTGACGAATTAGCGAAATATCCTTTTGCTGACGGTGGATTCGTGCTGTTTTGCCACTATCGCTATCTGGCGGTGGAGTATTTGCTGGTGGCAGTTCTGAGCAACCTGAGCAGTATGCGCGTTAACGAAAATCTCGACATCAACCCAACCCATTATCTTGATATCAATCATGCGGATATTGTTGCGCGTATCGATTTAACCGAATGGGAAACCAATCCAGAGTCCACCCGCTATCTCACTTTCCTGAAAGGGCGAGTAGGGCGCAAAGTGGCGGATTTCTTTATGGATTTCCTCGGGGCCAGCGAAGGGTTAAACGCGAAAGCGCAAAACCGTGGGCTGTTGCAAGCGGTTGATGATTTCACTGCCGAAGCACAACTGGATAAAGCAGAGCGACAGAACGTGCGCCAGCAGGTTTATAGCTACTGTAATGAGCAGCTGCAGGCAGGCGAAGAGATCGAACTGAAATCGCTGTCGAAAGAGCTGGCAGGCGTAAGCGAAGTGAGCTTCACGGAGTTTGCGGCTGAAAAAGGCTACGAACTGGAAGAGAGCTTCCCGGCAGACCGTAGCACACTGCGTCAGTTGACGAAGTTTGCCGGTAGCGGCGGTGGCTTGACTATTAACTTTGATGCGATGCTGTTAGGTGAACGCATCTTCTGGGATCCAGCAACCGATACCTTGACCATTAAAGGCACGCCGCCGAATTTGCGCGACCAATTGCAGCGCCGGACGTCTGGCGGCAATTAA", - "dna_sequence_length": 1008, - "functions": [ - "spermidine nucleoid-associated protein" - ], - "id": "CDS_2172", - "location": [ - [ - "NC_000913", - 2283947, - "-", - 1008 - ] - ], - "md5": "c94e744d4e8c3593af34568930f1dde4", - "parent_gene": "", - "protein_md5": "9be2c96a399f8a2736b461b69d22d4db", - "protein_translation": "MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELHRVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGFVLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIELKSLSKELAGVSEVSFTEFAAEKGYELEESFPADRSTLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGN", - "protein_translation_length": 335, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2181" - ], - [ - "gene_synonym", - "ASAP:ABE-0007238" - ], - [ - "gene_synonym", - "yejL" - ], - [ - "gene_synonym", - "EcoGene:EG12043" - ], - [ - "gene_synonym", - "GI:16130125" - ], - [ - "gene_synonym", - "b2187" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD24" - ], - [ - "gene_synonym", - "JW2175" - ], - [ - "gene_synonym", - "GeneID:946694" - ], - [ - "gene_synonym", - "NP_416692.1" - ] - ], - "dna_sequence": "ATGCCACAAATTTCCCGCTACAGTGATGAACAGGTTGAACAATTGCTCGCAGAGCTGCTCAACGTACTGGAAAAACATAAGGCTCCGACCGACCTTTCCCTGATGGTGTTAGGCAACATGGTCACTAACCTTATCAACACCAGCATTGCCCCGGCCCAACGCCAGGCAATTGCCAACTCTTTTGCCCGCGCCTTACAGTCCTCTATCAACGAAGACAAAGCGCACTAA", - "dna_sequence_length": 228, - "functions": [ - "UPF0352 family protein" - ], - "id": "CDS_2173", - "location": [ - [ - "NC_000913", - 2284129, - "+", - 228 - ] - ], - "md5": "8bb93ff0c9fdc7b67090a16e0b8498da", - "parent_gene": "", - "protein_md5": "36e730ae4c428e9a0ba546ba875139de", - "protein_translation": "MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNLINTSIAPAQRQAIANSFARALQSSINEDKAH", - "protein_translation_length": 75, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2188" - ], - [ - "gene_synonym", - "ECK2182" - ], - [ - "gene_synonym", - "EcoGene:EG12049" - ], - [ - "gene_synonym", - "yejM" - ], - [ - "gene_synonym", - "yejN" - ], - [ - "gene_synonym", - "JW2176" - ], - [ - "gene_synonym", - "GI:16130126" - ], - [ - "gene_synonym", - "NP_416693.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD27" - ], - [ - "gene_synonym", - "GeneID:946685" - ], - [ - "gene_synonym", - "ASAP:ABE-0007240" - ] - ], - "dna_sequence": "ATGGTAACTCATCGTCAGCGCTACCGTGAAAAAGTCTCCCAGATGGTCAGTTGGGGGCACTGGTTTGCACTGTTCAATATTCTGCTTTCGCTCGTCATTGGCAGCCGTTACCTGTTTATCGCCGACTGGCCGACAACGCTTGCTGGTCGCATTTATTCCTACGTAAGCATTATCGGCCATTTCAGCTTCCTGGTGTTCGCCACCTACTTGCTGATCCTCTTCCCGCTGACCTTTATCGTCGGCTCCCAGAGGCTGATGAGGTTTTTGTCCGTCATTCTGGCAACGGCGGGAATGACGCTATTACTGATCGATAGCGAAGTCTTTACTCGTTTCCATCTCCATCTTAATCCCATCGTCTGGCAACTGGTTATCAACCCAGACGAAAATGAGATGGCGCGCGACTGGCAGCTGATGTTCATCAGCGTGCCGGTTATTTTATTGCTTGAACTGGTGTTTGCGACGTGGAGCTGGCAAAAGCTGCGCAGCCTGACGCGTCGTCGACGCTTCGCGCGCCCGCTGGCCGCATTCTTATTTATCGCCTTTATCGCCTCGCATGTGGTGTATATCTGGGCCGATGCCAACTTCTATCGCCCGATCACCATGCAGCGCGCTAACCTGCCGCTTTCGTACCCGATGACGGCGCGACGTTTTCTTGAGAAGCATGGTCTGCTTGATGCGCAGGAGTATCAACGCCGTCTTATTGAGCAAGGTAATCCAGACGCCGTTTCCGTTCAGTATCCGTTAAGCGAACTGCGCTATCGCGATATGGGCACCGGGCAGAATGTGCTGTTGATTACTGTCGATGGCCTGAACTACTCACGCTTCGAGAAGCAGATGCCTGCGCTGGCAGGTTTTGCTGAGCAAAATATTTCGTTCACGCGCCATATGAGCTCCGGCAACACTACAGACAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTACGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGGCCAGGCACGCCGGCGCAGCGTATTAATGCTCTGACTGATCATACCGATCTGATGACGACGCTGATGCAACGCCTGCTACATGTCAGCACACCTGCCAGCGAATATTCGCAAGGTCAGGATTTGTTCAACCCTCAACGCCGTCATTACTGGGTTACCGCAGCGGATAACGATACGCTGGCAATTACCACCCCGAAAAAGACGCTGGTACTGAACAATAACGGTAAATACCGCACTTACAACTTACGTGGTGAAAGAGTGAAAGATGAAAAACCACAGTTAAGTTTGTTATTGCAAGTGCTGACAGACGAGAAGCGTTTTATCGCTAACTGA", - "dna_sequence_length": 1761, - "functions": [ - "essential inner membrane DUF3413 domain-containing protein", - "lipid A production and membrane permeability factor" - ], - "id": "CDS_2174", - "location": [ - [ - "NC_000913", - 2284376, - "+", - 1761 - ] - ], - "md5": "e9a087257fdb5c1b2eadce17eaeef19e", - "parent_gene": "", - "protein_md5": "050e85c2c0280cdc84a4e429da1237a5", - "protein_translation": "MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWPTTLAGRIYSYVSIIGHFSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLLIDSEVFTRFHLHLNPIVWQLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKLRSLTRRRRFARPLAAFLFIAFIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLDAQEYQRRLIEQGNPDAVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFEKQMPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDGILSTRTPAALITALNQQGYQLGLFSSDGFTSPLYRQALLSDFSMPSVRTQSDEQTATQWINWLGRYAQEDNRWFSWVSFNGTNIDDSNQQAFARKYSRAAGNVDDQINRVLNALRDSGKLDNTVVIITAGRGIPLSEEEETFDWSHGHLQVPLVIHWPGTPAQRINALTDHTDLMTTLMQRLLHVSTPASEYSQGQDLFNPQRRHYWVTAADNDTLAITTPKKTLVLNNNGKYRTYNLRGERVKDEKPQLSLLLQVLTDEKRFIAN", - "protein_translation_length": 586, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33924" - ], - [ - "gene_synonym", - "EcoGene:EG12051" - ], - [ - "gene_synonym", - "GeneID:946867" - ], - [ - "gene_synonym", - "ECK2184" - ], - [ - "gene_synonym", - "yejO" - ], - [ - "gene_synonym", - "b2190" - ], - [ - "gene_synonym", - "JW5839" - ], - [ - "gene_synonym", - "ASAP:ABE-0007244" - ] - ], - "dna_sequence": "ATGCATCAATCTGGTTCTGTTTCTCTTTGTCGTTCCGCAATATCTGTTCTGGTGGCTACAGCGTTATATTCACCCATAGCATTGGCATCAACTGTTGAGTATGGTGAGACAGTTGATGGTGTTGTCCTGGAAAAAGATATCCAGCTGGTTTATGGGACCGCCAATAATACGAAAATCAATCCTGGCGGAGAACAGCATATAAAAGAATTTGGTGTAAGTAATAATACTGAAATTAACGGAGGGTATCAGTACATTGAAATGAATGGCGCCGCAGAATACTCAGTATTAAATGACGGTTATCAAATTGTTCAAATGGGTGGCGCGGCAAACCAGACTACGCTCAATAATGGTGTGCTACAGGTTTATGGCGCAGCGAATGATACCACGATTAAAGGCGGGCGCTTAATCGTTGAAAAAGATGGGGGGGCCGTCTTTGTCGCTATCGAAAAGGGAGGACTACTGGAGGTTAAAGAGGGGGGATTTGCATTTGCGGTAGATCAGAAAGCAGGCGGTGCTATTAAAACAACCACGCGGGCCATGGAGGTATTCGGAACAAACCGTCTCGGTCAGTTCGATATCAAGAATGGTATTGCTAATAATATGTTGTTGGAAAACGGCGGAAGTTTGCGAGTTGAAGAAAATGACTTCGCTTATAATACCACTGTAGATAGTGGCGGCTTACTGGAGGTTATGGATGGCGGGACTGTAACTGGCGTTGATAAAAAAGCAGGCGGAAAATTAATTGTCTCAACGAATGCGCTGGAAGTGAGTGGTCCAAACAGTAAAGGCCAATTTAGTATAAAAGATGGTGTGTCAAAAAATTATGAACTGGATGATGGTTCCGGGCTCATTGTTATGGAGGACACGCAGGCCATTGATACTATCCTTGATAAGCATGCCACTATGCAATCGCTGGGAAAGGATACTGGTACGAAAGTGCAGGCAAATGCGGTATATGATCTCGGTCGATCATATCAGAATGGAAGTATCACGTATTCCTCAAAAGCCATCTCTGAAAATATGGTTATCAACAATGGCCGCGCTAACGTCTGGGCTGGCACAATGGTTAACGTTTCAGTCAGAGGGAATGATGGCATTCTTGAGGTCATGAAGCCGCAAATAAATTATGCACCCGCAATGTTGGTGGGTAAGGTAGTGGTTTCTGAGGGCGCTTCTTTTAGAACGCATGGTGCCGTGGATACCAGCAAAGCGGACGTTTCGCTCGAAAATAGCGTATGGACCATCATTGCCGATATCACTACGACGAACCAAAACACCCTCCTCAACTTAGCCAACCTTGCGATGTCTGACGCAAATGTGATTATGATGGATGAGCCAGTGACTCGTTCATCAGTGACGGCAAGTGCGGAAAATTTCATTACGTTGACCACCAATACCCTGTCGGGAAACGGCAATTTTTATATGCGTACCGATATGGCTAATCATCAGAGCGATCAGCTCAACGTCACCGGTCAGGCAACAGGTGATTTCAAAATATTCGTGACGGACACCGGTGCCAGCCCGGCAGCAGGAGATAGCCTTACACTGGTAACAACGGGCGGCGGTGATGCTGCATTTACGTTGGGCAATGCCGGAGGCGTTGTTGATATCGGTACGTATGAATATACCTTGCTGGATAATGGCAACCATAGCTGGAGTCTGGCAGAGAATCGCGCGCAAATTACCCCTTCAACCACTGATGTGCTGAATATGGCGGCCGCACAACCGCTGGTATTTGATGCAGAACTGGACACCGTGCGTGAGCGTCTTGGTAGCGTAAAAGGCGTTAGTTACGATACGGCGATGTGGAGTTCGGCAATTAACACCCGCAACAACGTGACCACTGATGCGGGAGCTGGTTTTGAGCAAACATTGACGGGCCTGACGCTCGGTATCGATAGCCGTTTCTCCCGTGAAGAAAGCAGTACAATTCGCGGCTTGATCTTTGGTTACTCTCATTCTGATATTGGTTTTGATCGCGGCGGCAAAGGTAATATCGATAGCTATACCCTGGGGGCTTATGCCGGTTGGGAGCATCAGAACGGTGCCTATGTTGATGGGGTGGTGAAAGTTGACCGTTTTGCCAACACCATCCATGGCAAGATGAGTAATGGGGCAACAGCGTTTGGCGATTACAATAGTAACGGCGCGGGTGCTCATGTTGAGAGCGGGTTCCGTTGGGTTGACGGATTGTGGAGTGTTAGACCCTATCTGGCCTTTACCGGCTTTACCACAGATGGTCAGGACTACACGTTATCAAACGGCATGCGCGCGGATGTGGGAAATACCCGGATATTACGCGCTGAAGCGGGAACGGCGGTAAGCTATCACATGGACCTGCAAAACGGTACGACGCTGGAACCCTGGCTGAAAGCGGCCGTGCGTCAGGAATACGCCGATTCTAACCAGGTGAAAGTTAATGACGATGGCAAATTTAATAATGATGTGGCTGGAACCAGTGGCGTTTATCAGGCTGGTATAAGGTCATCGTTTACCCCGACGTTAAGCGGTCATTTGTCAGTCAGCTATGGCAATGGCGCAGGGGTAGAATCGCCGTGGAATACTCAGGCGGGTGTGGTCTGGACGTTCTGA", - "dna_sequence_length": 2592, - "id": "CDS_2175", - "location": [ - [ - "NC_000913", - 2290180, - "-", - 67 - ], - [ - "NC_000913", - 2288914, - "-", - 2525 - ] - ], - "md5": "f69a828bbd06c075cee0a7015464d3c2", - "parent_gene": "", - "protein_md5": "ee3d295ae71851b8869e0782746ae11b", - "protein_translation": "MHQSGSVSLCRSAISVLVATALYSPIALASTVEYGETVDGVVLEKDIQLVYGTANNTKINPGGEQHIKEFGVSNNTEINGGYQYIEMNGAAEYSVLNDGYQIVQMGGAANQTTLNNGVLQVYGAANDTTIKGGRLIVEKDGGAVFVAIEKGGLLEVKEGGFAFAVDQKAGGAIKTTTRAMEVFGTNRLGQFDIKNGIANNMLLENGGSLRVEENDFAYNTTVDSGGLLEVMDGGTVTGVDKKAGGKLIVSTNALEVSGPNSKGQFSIKDGVSKNYELDDGSGLIVMEDTQAIDTILDKHATMQSLGKDTGTKVQANAVYDLGRSYQNGSITYSSKAISENMVINNGRANVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGKVVVSEGASFRTHGAVDTSKADVSLENSVWTIIADITTTNQNTLLNLANLAMSDANVIMMDEPVTRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGASPAAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLVFDAELDTVRERLGSVKGVSYDTAMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESSTIRGLIFGYSHSDIGFDRGGKGNIDSYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDGQDYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVNDDGKFNNDVAGTSGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF", - "protein_translation_length": 863, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130129" - ], - [ - "gene_synonym", - "EcoGene:EG40008" - ], - [ - "gene_synonym", - "GeneID:949121" - ], - [ - "gene_synonym", - "b2192" - ], - [ - "gene_synonym", - "insH1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007252" - ], - [ - "gene_synonym", - "NP_416696.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CE55" - ], - [ - "gene_synonym", - "ECK0261" - ] - ], - "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", 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"gene_synonym", - "EcoGene:EG11527" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31802" - ], - [ - "gene_synonym", - "NP_416697.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007259" - ] - ], - "dna_sequence": "ATGCCTGAAGCAACACCTTTTCAGGTGATGATTGTGGATGATCATCCACTTATGCGACGCGGTGTTCGTCAGTTACTGGAGCTTGATCCTGGCTCTGAAGTGGTCGCCGAAGCGGGCGACGGCGCGAGCGCTATCGATCTGGCGAATAGACTGGATATCGACGTGATCTTGCTGGATCTCAATATGAAAGGTATGAGTGGCCTGGATACTCTCAATGCCTTGCGCAGGGATGGCGTTACCGCGCAAATTATTATCCTGACCGTATCCGATGCCTCCAGCGATGTCTTTGCGCTGATAGACGCAGGCGCAGACGGTTATCTGTTGAAAGACAGCGACCCGGAAGTATTGCTGGAAGCGATTCGTGCCGGAGCGAAAGGCAGCAAAGTCTTTAGCGAACGCGTCAATCAGTACTTACGTGAACGTGAAATGTTTGGCGCGGAAGAAGATCCCTTCAGCGTGCTGACGGAGCGCGAGCTGGATGTTCTGCACGAGCTGGCACAGGGGCTGTCAAATAAACAGATTGCCTCGGTGTTGAATATTTCCGAGCAGACAGTAAAAGTACATATTCGCAATCTGCTGCGTAAACTCAATGTCCGCTCACGCGTGGCGGCCACCATTCTGTTCCTGCAACAACGCGGGGCACAATAA", - "dna_sequence_length": 648, - "functions": [ - "response regulator in two-component regulatory system with NarQ" - ], - "id": "CDS_2177", - "location": [ - [ - "NC_000913", - 2290500, - "+", - 648 - ] - ], - "md5": "0ed3deec5e61cf7063d1260a97740cfe", - "parent_gene": "", - "protein_md5": "0dc53922f09befddefb5df758b5db0ee", - "protein_translation": "MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ", - "protein_translation_length": 215, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2186" - ], - [ - "gene_synonym", - "JW2182" - ], - [ - "gene_synonym", - "GI:16130131" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABM9" - ], - [ - "gene_synonym", - "b2194" - ], - [ - "gene_synonym", - "GeneID:946623" - ], - [ - "gene_synonym", - "EcoGene:EG12052" - ], - [ - "gene_synonym", - "yejP" - ], - [ - "gene_synonym", - "ccmH" - ], - [ - "gene_synonym", - "NP_416698.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007262" - ] - ], - 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"ATGAGGTTTTTATTGGGCGTGCTGATGCTGATGATCTCCGGCTCAGCGCTGGCGACCATCGATGTGTTGCAGTTTAAAGATGAAGCACAGGAACAACAGTTCCGTCAGCTCACTGAAGAACTGCGCTGCCCGAAATGCCAGAACAACAGCATTGCCGATTCCAACTCGATGATTGCCACCGACCTGCGTCAGAAAGTGTATGAACTGATGCAGGAAGGTAAAAGTAAAAAAGAGATTGTCGATTATATGGTGGCGCGTTACGGCAACTTCGTCACTTACGATCCGCCGTTAACGCCGCTGACCGTGCTGCTGTGGGTGCTGCCAGTAGTGGCTATTGGCATTGGCGGTTGGGTCATATACGCCCGCTCGCGGCGTCGGGTACGCGTGGTGCCGGAAGCGTTTCCTGAACAAAGCGTGCCGGAAGGTAAGCGTGCCGGATATGTTGTTTATCTGCCGGGTATTGTGGTGGCGTTAATTGTGGCTGGCGTCAGCTACTACCAGACTGGCAATTATCAGCAGGTGAAAATCTGGCAGCAGGCCACGGCACAGGCTCCGGCGTTGCTGGACAGGGCGCTGGATCCGAAAGCCGATCCGCTCAACGAAGAAGAGATGTCGCGTCTTGCGCTGGGGATGCGTACTCAACTGCAAAAAAATCCGGGAGATATAGAAGGCTGGATTATGTTGGGCCGCGTTGGCATGGCGCTGGGTAACGCCAGTATCGCCACCGATGCATACGCCACTGCGTATCGCCTCGATCCGAAAAACAGTGATGCTGCACTGGGATACGCTGAAGCGTTGACTCGTTCATCTGATCCCAACGACAACCGCCTCGGCGGTGAACTGCTACGTCAGCTGGTGAGAACGGACCATAGCAATATCCGTGTGCTAAGCATGTATGCGTTTAATGCCTTTGAGCAGCAGCGATTTGGCGAAGCCGTTGCCGCGTGGGAGATGATGTTGAAACTCTTACCTGCCAACGATACTCGCCGTGCGGTGATTGAACGTAGTATCGCGCAGGCGATGCAACATTTGTCGCCGCAGGAGAGTAAATAA", 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"GeneID:949073" - ], - [ - "gene_synonym", - "EcoGene:EG12053" - ], - [ - "gene_synonym", - "yejQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0007264" - ], - [ - "gene_synonym", - "ccmG" - ], - [ - "gene_synonym", - "dsbE" - ], - [ - "gene_synonym", - "NP_416699.1" - ] - ], - "dna_sequence": "ATGAAGCGCAAAGTATTGTTAATTCCGTTGATTATCTTCCTGGCGATTGCCGCGGCGCTGCTGTGGCAGCTGGCGCGTAATGCCGAAGGGGATGATCCGACCAATCTGGAATCGGCGCTCATTGGCAAGCCTGTGCCGAAGTTTCGTCTCGAATCACTGGACAATCCGGGGCAGTTTTATCAGGCGGATGTGCTGACTCAGGGCAAACCAGTACTGCTTAACGTCTGGGCGACCTGGTGTCCGACCTGCCGTGCGGAACATCAATATCTGAATCAGCTTTCTGCGCAGGGCATCCGCGTGGTCGGCATGAACTATAAAGACGATCGCCAGAAGGCAATCAGCTGGCTGAAAGAGCTGGGCAATCCTTACGCGCTAAGCCTGTTTGATGGCGATGGCATGTTAGGGCTGGATCTCGGTGTCTATGGCGCGCCAGAAACGTTTCTTATTGACGGCAACGGCATCATTCGCTATCGCCATGCGGGCGATCTGAATCCTCGCGTCTGGGAAGAAGAGATCAAGCCGCTGTGGGAGAAATACAGTAAGGAGGCCGCACAATGA", - "dna_sequence_length": 558, - "functions": [ - "periplasmic thioredoxin of cytochrome c-type biogenesis" - ], - "id": "CDS_2179", - "location": [ - [ - "NC_000913", - 2292964, - "-", - 558 - ] - ], - "md5": "76ab8c5b5fb79e42d588d9059da23d2b", - "parent_gene": "", - "protein_md5": "8d77f686c066c4296f8b5f002af8963f", - "protein_translation": "MKRKVLLIPLIIFLAIAAALLWQLARNAEGDDPTNLESALIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWEKYSKEAAQ", - "protein_translation_length": 185, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2184" - ], - [ - "gene_synonym", - "GI:16130133" - ], - [ - "gene_synonym", - "GeneID:948783" - ], - [ - "gene_synonym", - "b2196" - ], - [ - "gene_synonym", - "ECK2188" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33927" - ], - [ - "gene_synonym", - "ASAP:ABE-0007269" - ], - [ - "gene_synonym", - "EcoGene:EG12054" - ], - [ - "gene_synonym", - "yejR" - ], - [ - "gene_synonym", - "ccmF" - ], - [ - "gene_synonym", - "NP_416700.1" - ] - ], - "dna_sequence": "ATGATGCCAGAAATTGGTAACGGACTGCTGTGCCTGGCGCTGGGAATTGCGCTGCTGCTGTCCGTGTATCCGCTATGGGGCGTGGCGCGCGGAGATGCGCGCATGATGGCGTCTTCCCGCTTGTTTGCCTGGCTGCTGTTTATGTCTGTGGCTGGCGCATTTCTGGTGCTGGTCAATGCTTTCGTGGTCAACGACTTCACCGTCACCTATGTTGCCAGCAACTCCAATACCCAGCTTCCGGTGTGGTATCGCGTGGCGGCTACCTGGGGCGCGCATGAAGGCTCGCTACTGCTGTGGGTGCTGCTGATGAGCGGCTGGACCTTTGCGGTGGCGATTTTTAGTCAGCGTATTCCGCTGGATATTGTGGCCCGTGTACTGGCGATAATGGGGATGGTCAGTGTCGGCTTTTTGCTGTTCATTCTCTTTACCTCTAACCCGTTCTCTCGCACGTTGCCGAACTTCCCGATTGAAGGTCGCGATCTTAACCCGCTATTGCAGGATCCGGGGCTGATCTTCCATCCGCCTCTGCTTTATATGGGGTACGTGGGTTTCTCGGTGGCGTTTGCTTTTGCCATTGCTTCTTTGCTGAGCGGGCGTCTGGACAGCACTTATGCGCGTTTTACTCGTCCGTGGACGCTGGCAGCGTGGATCTTCCTGACGCTCGGCATCGTGCTCGGTTCCGCATGGGCCTATTACGAACTCGGCTGGGGTGGCTGGTGGTTCTGGGATCCGGTAGAAAACGCCTCGTTTATGCCGTGGCTGGTGGGGACTGCGCTGATGCACTCACTGGCGGTCACTGAACAACGCGCCAGCTTCAAAGCGTGGACATTACTGCTGGCAATCAGTGCCTTCTCGTTGTGTCTGTTGGGGACTTTCCTCGTGCGTTCCGGCGTGCTGGTATCGGTACACGCGTTTGCGTCTGATCCGGCGCGCGGTATGTTTATCCTCGCCTTTATGGTGCTGGTGATTGGCGGTTCGCTGCTGCTGTTTGCCGCGCGTGGACACAAAGTTCGCTCACGCGTAAACAATGCGCTGTGGTCGCGGGAATCTTTGCTGTTAGCGAACAATGTTTTGCTGGTCGCTGCGATGCTGGTGGTGTTGCTGGGGACGCTGCTGCCGTTGGTGCATAAGCAACTGGGACTGGGCAGTATTTCGATTGGCGAACCGTTCTTCAACACCATGTTTACCTGGCTGATGGTGCCGTTTGCGCTACTGCTTGGTGTCGGTCCTCTGGTGCGCTGGGGGCGGGATCGCCCGCGTAAGATCCGCAATTTATTGATTATCGCCTTCATCTCTACGCTGGTGCTGTCGCTGCTGTTGCCGTGGCTGTTCGAAAGCAAAGTTGTGGCGATGACGGTGCTCGGCCTGGCAATGGCCTGCTGGATTGCGGTGCTGGCAATTGCGGAAGCTGCGCTACGTATTTCACGCGGCACGAAAACCACCTTCAGTTATTGGGGGATGGTGGCGGCTCACCTTGGGCTGGCAGTGACAATTGTTGGCATTGCCTTTAGCCAGAACTATAGCGTTGAGCGTGATGTGCGCATGAAGTCCGGCGATAGCGTCGATATTCATGAATATCGCTTCACCTTCCGTGATGTCAAAGAGGTGACTGGCCCGAACTGGCGTGGCGGTGTGGCGACTATCGGCGTAACGCGCGATGGCAAGCCGGAAACGGTGCTGTATGCGGAAAAACGTTATTACAACACTGCCGGGTCGATGATGACCGAAGCGGCAATTGACGGCGGCATCACGCGTGACCTGTACGCGGCCCTCGGTGAAGAGCTGGAAAACGGCGCGTGGGCCGTGCGTCTTTACTACAAACCATTTGTTCGCTGGATTTGGGCGGGCGGGCTGATGATGGCGTTGGGCGGACTGCTGTGTCTGTTTGATCCTCGCTATCGTAAGCGCGTGAGTCCGCAAAAAACTGCGCCGGAGGCCGTATGA", 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647, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2185" - ], - [ - "gene_synonym", - "b2197" - ], - [ - "gene_synonym", - "ECK2189" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69490" - ], - [ - "gene_synonym", - "GI:16130134" - ], - [ - "gene_synonym", - "NP_416701.1" - ], - [ - "gene_synonym", - "EcoGene:EG12055" - ], - [ - "gene_synonym", - "yejS" - ], - [ - "gene_synonym", - "ccmE" - ], - [ - "gene_synonym", - "GeneID:946697" - ], - [ - "gene_synonym", - "ASAP:ABE-0007271" - ] - ], - "dna_sequence": "ATGAATATTCGCCGTAAAAACCGCTTGTGGATTGCCTGTGCCGTGTTGGCAGGGCTGGCGCTGACTATCGGTCTGGTGCTATATGCGCTGCGCTCGAATATCGATCTCTTTTATACGCCGGGGGAAATTCTCTACGGCAAGCGTGAAACTCAGCAAATGCCGGAAGTCGGTCAGCGTCTGCGCGTTGGCGGGATGGTGATGCCGGGTAGTGTGCAGCGCGATCCCAATTCGCTGAAAGTGACCTTCACCATTTACGATGCTGAAGGCTCAGTGGATGTCTCTTACGAAGGCATTTTGCCGGATCTGTTCCGTGAAGGGCAGGGCGTTGTGGTGCAGGGCGAACTGGAAAAAGGCAATCATATCCTCGCGAAAGAAGTGCTGGCGAAACACGATGAAAACTATACGCCGCCAGAAGTTGAGAAAGCGATGGAAGCTAACCACCGTCGCCCGGCGAGTGTTTATAAGGACCCAGCATCATGA", - "dna_sequence_length": 480, - "functions": [ - "periplasmic heme chaperone" - ], - "id": "CDS_2181", - "location": [ - [ - "NC_000913", - 2295380, - "-", - 480 - ] - ], - "md5": "510f298c61fcbf984a19d7cd9c310ca0", - "parent_gene": "", - "protein_md5": "c75bff5d958d3809695d48d596226a11", - "protein_translation": "MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEILYGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDLFREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS", - "protein_translation_length": 159, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2190" - ], - [ - "gene_synonym", - "JW2186" - ], - [ - "gene_synonym", - "GeneID:946709" - ], - [ - "gene_synonym", - "b2198" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABM5" - ], - [ - "gene_synonym", - "GI:16130135" - ], - [ - "gene_synonym", - "NP_416702.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007273" - ], - [ - "gene_synonym", - "EcoGene:EG12169" - ], - [ - "gene_synonym", - "ccmD" - ], - [ - "gene_synonym", - "yojM" - ] - ], - "dna_sequence": "ATGACCCCTGCATTTGCTTCCTGGAATGAATTTTTCGCAATGGGCGGTTACGCCTTTTTTGTCTGGCTGGCGGTGGTGATGACCGTTATTCCGCTGGTGGTTTTGGTCGTGCACTCGGTGATGCAACATCGCGCAATTCTGCGTGGCGTGGCGCAACAGCGGGCGCGTGAGGCGCGTTTACGTGCTGCGCAACAGCAGGAGGCTGCATGA", - "dna_sequence_length": 210, - "functions": [ - "cytochrome c biogenesis protein", - "heme export ABC transporter holo-CcmE release factor" - ], - "id": "CDS_2182", - "location": [ - [ - "NC_000913", - 2295586, - "-", - 210 - ] - ], - "md5": 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"ATGTGGAAAACACTGCATCAACTGGCGATCCCACCACGGCTGTATCAAATCTGTGGCTGGTTTATACCGTGGCTGGCAATTGCCAGTGTGGTCGTGCTTACCGTCGGCTGGATCTGGGGATTCGGCTTTGCTCCGGCTGATTATCAGCAGGGAAATAGCTACCGCATTATCTACCTGCATGTGCCTGCGGCGATCTGGTCGATGGGCATTTATGCATCAATGGCAGTGGCAGCGTTTATTGGCCTTGTCTGGCAGATGAAAATGGCCAACCTGGCGGTGGCGGCGATGGCCCCCATTGGTGCCGTGTTTACCTTTATTGCCCTGGTTACCGGCTCTGCATGGGGAAAACCGATGTGGGGCACCTGGTGGGTATGGGATGCACGTCTGACTTCTGAACTGGTGCTGCTGTTTTTGTATGTGGGTGTGATTGCCCTGTGGCACGCCTTCGACGACCGCCGTCTGGCGGGCCGTGCGGCAGGTATCCTGGTGCTGATTGGCGTGGTGAATCTGCCGATTATTCATTACTCCGTGGAGTGGTGGAACACCCTGCATCAGGGATCAACGCGGATGCAGCAAAGTATCGATCCGGCGATGCGTTCGCCGCTGCGCTGGTCGATTTTTGGCTTCCTGCTCCTGTCTGCCACGCTGACGCTGATGCGGATGCGTAATTTGATTTTGCTGATGGAAAAACGCCGTCCGTGGGTGAGTGAACTGATACTGAAAAGAGGCCGTAAATGA", - "dna_sequence_length": 738, - "functions": [ - "heme export ABC transporter permease", - "CcmE-interacting protein" - ], - "id": "CDS_2183", - "location": [ - [ - "NC_000913", - 2296320, - "-", - 738 - ] - ], - "md5": "d48eddea5b315fc529863b63797f6ff2", - "parent_gene": "", - "protein_md5": "6d7d675f418d05c29874944be89efc88", - "protein_translation": "MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFAPADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAVFTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAGILVLIGVVNLPIIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTLMRMRNLILLMEKRRPWVSELILKRGRK", - "protein_translation_length": 245, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2192" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABL8" - ], - [ - "gene_synonym", - "JW2188" - ], - [ - "gene_synonym", - "GI:16130137" - ], - [ - "gene_synonym", - "GeneID:946692" - ], - [ - "gene_synonym", - "yejV" - ], - [ - "gene_synonym", - "EcoGene:EG12058" - ], - [ - "gene_synonym", - "NP_416704.1" - ], - [ - "gene_synonym", - "b2200" - ], - [ - "gene_synonym", - "ASAP:ABE-0007277" - ], - [ - "gene_synonym", - "ccmB" - ] - ], - "dna_sequence": "ATGATGTTCTGGCGCATTTTCCGTCTTGAGCTGCGTGTAGCGTTTCGCCATAGCGCCGAAATCGCCAACCCGCTGTGGTTCTTCCTGATTGTAATTACCCTTTTTCCGCTCAGTATCGGTCCGGAGCCGCAACTGCTGGCGCGTATTGCACCGGGCATTATCTGGGTTGCTGCGCTGCTTTCATCCTTGCTGGCGCTGGAACGACTGTTCCGTGACGATTTGCAGGACGGCAGTCTTGAACAATTGATGTTGTTGCCGTTACCCTTGCCCGCCGTTGTGCTGGCGAAGGTGATGGCGCACTGGATGGTAACCGGTCTGCCGTTACTCATCCTTTCGCCACTGGTAGCAATGCTACTGGGAATGGATGTTTATGGCTGGCAAGTGATGGCGCTGACGCTGCTGCTGGGAACGCCTACGCTTGGCTTTCTCGGTGCACCGGGCGTGGCGCTGACAGTGGGACTTAAGCGCGGTGGTGTGCTGCTCAGCATACTGGTGTTACCGCTGACTATCCCATTACTCATCTTTGCCACCGCCGCGATGGACGCGGCTTCTATGCATTTGCCCGTTGACGGGTATCTGGCAATTTTAGGCGCGTTGCTGGCAGGCACCGCGACATTAAGTCCTTTTGCGACGGCGGCAGCGTTACGAATCAGCATTCAATAA", - "dna_sequence_length": 663, - "functions": [ - "heme export ABC transporter permease" - ], - "id": "CDS_2184", - "location": [ - [ - "NC_000913", - 2297024, - "-", - 663 - ] - ], - "md5": "bff395d949c8ffd2a038906489d798bb", - "parent_gene": "", - "protein_md5": "a5cdfba447e7093ce9dc19120de5ade9", - "protein_translation": "MMFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQLLARIAPGIIWVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWMVTGLPLLILSPLVAMLLGMDVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVLLSILVLPLTIPLLIFATAAMDAASMHLPVDGYLAILGALLAGTATLSPFATAAALRISIQ", - "protein_translation_length": 220, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2193" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33931" - ], - [ - "gene_synonym", - "JW5366" - ], - [ - "gene_synonym", - "GI:90111402" - ], - [ - "gene_synonym", - "GeneID:946714" - ], - [ - "gene_synonym", - "yejW" - ], - [ - "gene_synonym", - "ASAP:ABE-0007279" - ], - [ - "gene_synonym", - "EcoGene:EG12059" - ], - [ - "gene_synonym", - "b2201" - ], - [ - "gene_synonym", - "ccmA" - ], - [ - "gene_synonym", - "NP_416705.2" - ] - ], - "dna_sequence": "GTGGGTATGCTTGAAGCCAGAGAGTTACTTTGTGAGCGGGATGAACGAACCTTATTTAGTGGCTTGTCATTTACGCTGAACGCAGGAGAGTGGGTACAAATCACCGGTAGCAACGGCGCGGGGAAGACAACGCTTCTCCGTTTGCTGACGGGGTTGTCTCGCCCTGACGCAGGCGAGGTTCTCTGGCAAGGGCAGCCCTTGCATCAGGTACGCGACAGCTACCATCAAAACCTGTTATGGATAGGCCATCAGCCGGGGATCAAAACCCGGCTGACGGCGTTAGAAAATCTGCACTTTTATCATCGCGATGGCGATACCGCACAATGTCTGGAAGCCCTGGCGCAGGCCGGGCTTGCCGGATTCGAAGATATTCCTGTAAATCAGCTCTCGGCCGGGCAACAACGCCGCGTCGCTTTAGCGCGTCTGTGGCTGACCCGTGCCACGTTATGGATCCTCGACGAGCCTTTTACCGCGATTGACGTTAACGGTGTCGATCGTCTGACCCAGCGTATGGCGCAGCATACGGAGCAGGGGGGGATTGTGATTCTGACTACCCACCAGCCGCTCAACGTTGCTGAAAGTAAAATTCGCCGCATTTCACTGACGCAAACGAGGGCCGCATGA", - "dna_sequence_length": 624, - "functions": [ - "heme export ABC transporter ATPase" - ], - "id": "CDS_2185", - "location": [ - [ - "NC_000913", - 2297644, - "-", - 624 - ] - ], - "md5": "c21421a2d754c2070f9ed9d376f2475d", - "parent_gene": "", - "protein_md5": "4acc2710d7225bf479d2e75f9c427835", - "protein_translation": "MGMLEARELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLLRLLTGLSRPDAGEVLWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDGDTAQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVNGVDRLTQRMAQHTEQGGIVILTTHQPLNVAESKIRRISLTQTRAA", - "protein_translation_length": 207, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130139" - ], - [ - "gene_synonym", - "JW2190" - ], - [ - "gene_synonym", - "ECK2194" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABL5" - ], - [ - "gene_synonym", - "NP_416706.1" - ], - [ - "gene_synonym", - "EcoGene:EG12060" - ], - [ - "gene_synonym", - "ASAP:ABE-0007281" - ], - [ - "gene_synonym", - "napC" - ], - [ - "gene_synonym", - "GeneID:946706" - ], - [ - "gene_synonym", - "b2202" - ], - [ - "gene_synonym", - "yejX" - ] - ], - "dna_sequence": "ATGGGAAATTCTGACCGTAAGCCTGGTCTGATTAAGCGCCTGTGGAAATGGTGGCGTACCCCCAGCCGTCTGGCGCTGGGGACGCTGCTGTTGATCGGTTTTGTTGGCGGCATCGTCTTCTGGGGTGGCTTTAACACCGGGATGGAAAAAGCCAATACCGAAGAGTTCTGCATTAGCTGCCACGAAATGCGCAACACGGTGTATCAGGAATACATGGATTCCGTGCACTACAACAACCGTAGCGGCGTCCGTGCGACCTGTCCGGATTGTCACGTTCCGCACGAGTTTGTGCCGAAGATGATACGCAAGCTCAAAGCAAGTAAAGAGCTGTATGGTAAAATTTTTGGCGTTATTGACACGCCGCAGAAATTTGAAGCTCATCGTCTGACGATGGCACAGAATGAGTGGCGGCGCATGAAGGACAATAACTCGCAGGAGTGCCGTAACTGTCACAACTTCGAGTATATGGATACAACCGCCCAGAAATCGGTTGCCGCGAAGATGCATGACCAGGCGGTGAAAGATGGGCAAACCTGTATTGATTGCCATAAAGGGATAGCGCACAAGCTGCCCGATATGCGTGAAGTCGAGCCAGGTTTTTAA", - "dna_sequence_length": 603, - "functions": [ - "quinol dehydrogenase, electron source for NapAB" - ], - "id": "CDS_2186", - "location": [ - [ - "NC_000913", - 2298259, - "-", - 603 - ] - ], - "md5": "9101fe23dce0461f1e1bfa7e8b4a28fe", - "parent_gene": "", - "protein_md5": "e7e732f195c2b45b50d9be60c9a66db8", - "protein_translation": "MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGFNTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIRKLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTAQKSVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMREVEPGF", - "protein_translation_length": 200, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2195" - ], - [ - "gene_synonym", - "JW5367" - ], - [ - "gene_synonym", - "GI:90111403" - ], - [ - "gene_synonym", - "NP_416707.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABL3" - ], - [ - "gene_synonym", - "ASAP:ABE-0007283" - ], - [ - "gene_synonym", - "napB" - ], - [ - "gene_synonym", - "b2203" - ], - [ - "gene_synonym", - "GeneID:946698" - ], - [ - "gene_synonym", - "yejY" - ], - [ - "gene_synonym", - "EcoGene:EG12061" - ] - ], - "dna_sequence": "ATGAAAAGCCATGACCTGAAGAAAGCGCTGTGTCAATGGACGGCGATGCTGGCCCTGGTGGTAAGCGGCGCGGTTTGGGCGGCTAATGGCGTCGATTTTAGCCAGTCGCCGGAAGTATCCGGGACACAGGAAGGGGCCATTCGGATGCCAAAAGAGCAGGATCGGATGCCGCTGAACTATGTGAATCAGCCGCCAATGATCCCGCATAGCGTTGAAGGTTATCAGGTAACGACCAATACCAATCGCTGCTTGCAGTGCCACGGTGTCGAAAGCTATCGCACCACTGGCGCGCCGCGTATCAGTCCTACTCACTTTATGGACAGCGACGGCAAAGTGGGCGCGGAAGTGGCTCCGCGTCGTTATTTCTGTCTGCAATGTCACGTACCGCAGGCCGATACCGCGCCAATCGTGGGGAATACCTTTACCCCATCAAAAGGTTACGGGAAATAA", - "dna_sequence_length": 450, - "functions": [ - "nitrate reductase, small, cytochrome C550 subunit, periplasmic" - ], - "id": "CDS_2187", - "location": [ - [ - "NC_000913", - 2298718, - "-", - 450 - ] - ], - "md5": "b572ed3df60d82de8c6c26431687f853", - "parent_gene": "", - "protein_md5": "c2016f296eb42227d9dfe25bc81b90e6", - "protein_translation": "MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQEGAIRMPKEQDRMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISPTHFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK", - "protein_translation_length": 149, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2192" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33934" - ], - [ - "gene_synonym", - "NP_416708.1" - ], - [ - "gene_synonym", - "ECK2196" - ], - [ - "gene_synonym", - "GeneID:945984" - ], - [ - "gene_synonym", - "EcoGene:EG12062" - ], - [ - "gene_synonym", - "ASAP:ABE-0007285" - ], - [ - "gene_synonym", - "GI:16130141" - ], - [ - "gene_synonym", - "napH" - ], - [ - "gene_synonym", - "yejZ" - ], - [ - "gene_synonym", - "b2204" - ] - ], - "dna_sequence": 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"NC_000913", - 2299578, - "-", - 864 - ] - ], - "md5": "073199b36603b54e2f9d2b3dabd4e8bc", - "parent_gene": "", - "protein_md5": "c0e1253dde259199d4f90ddcf37db47d", - "protein_translation": "MANRKRDAGREALEKKGWWRSHRWLVLRRLCQFFVLGMFLSGPWFGVWILHGNYSSSLLFDTVPLTDPLMTLQSLASGHLPATVALTGAVIITVLYALAGKRLFCSWVCPLNPITDLANWLRRRFDLNQSATIPRHIRYVLLVVILVGSALTGTLIWEWINPVSLMGRSLVMGFGSGALLILALFLFDLLVVEHGWCGHICPVGALYGVLGSKGVITVAATDRQKCNRCMDCFHVCPEPHVLRAPVLDEQSPVQVTSRDCMTCGRCVDVCSEDVFTITTRWSSGAKS", - "protein_translation_length": 287, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2193" - ], - [ - "gene_synonym", - "EcoGene:EG12064" - ], - [ - "gene_synonym", - "ECK2197" - ], - [ - "gene_synonym", - "napG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAL3" - ], - [ - "gene_synonym", - "GeneID:945544" - ], - [ - "gene_synonym", - "yojB" - ], - [ - "gene_synonym", - "yojA" - ], - [ - "gene_synonym", - "NP_416709.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007287" - ], - [ - "gene_synonym", - "GI:16130142" - ], - [ - "gene_synonym", - "b2205" - ] - ], - "dna_sequence": "ATGTCCCGGTCAGCGAAACCTCAAAATGGTCGCCGCCGCTTTCTGCGCGATGTCGTTCGCACAGCAGGCGGGCTGGCTGCCGTGGGTGTGGCGCTGGGGTTACAACAGCAAACCGCACGCGCATCTGGCGTGCGGTTGCGCCCGCCCGGAGCCATAAACGAGAACGCCTTTGCCAGTGCCTGTGTGCGTTGCGGTCAGTGTGTTCAGGCTTGCCCTTACGACACCTTAAAACTGGCGACGCTGGCCTCTGGTCTGTCGGCGGGCACGCCATATTTTGTCGCACGGGATATTCCTTGCGAAATGTGTGAGGACATTCCGTGCGCCAAAGTGTGCCCAAGCGGTGCGCTGGATCGTGAGATTGAATCGATCGACGACGCGCGGATGGGGCTGGCGGTACTGGTGGACCAGGAAAACTGTCTCAACTTTCAGGGGCTGCGCTGCGATGTTTGTTATCGCGAATGCCCGAAAATTGATGAGGCCATCACCCTGGAGCTGGAGCGCAACACGCGTACCGGTAAGCACGCCCGCTTTCTGCCGACGGTTCACAGCGACGCCTGTACCGGTTGCGGTAAGTGCGAAAAAGTATGCGTGCTGGAACAACCGGCAATCAAGGTGTTACCGCTGTCACTGGCGAAAGGGGAGTTAGGTCACCATTACCGCTTCGGCTGGCTGGAGGGGAACAATGGCAAATCGTAA", - "dna_sequence_length": 696, - "functions": [ - "ferredoxin-type protein" - ], - "id": "CDS_2189", - "location": [ - [ - "NC_000913", - 2300260, - "-", - 696 - ] - ], - "md5": "ec5de38150d7f4c8f4cbf492ce10d49a", - "parent_gene": "", - "protein_md5": "ca994a507e551f1af2be17e8723917e9", - "protein_translation": "MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGVRLRPPGAINENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFGWLEGNNGKS", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33937" - ], - [ - "gene_synonym", - "GeneID:947093" - ], - [ - "gene_synonym", - "NP_416710.1" - ], - [ - "gene_synonym", - "JW2194" - ], - [ - "gene_synonym", - "ECK2198" - ], - [ - "gene_synonym", - "ASAP:ABE-0007289" - ], - [ - "gene_synonym", - "EcoGene:EG12067" - ], - [ - "gene_synonym", - "yojD" - ], - [ - "gene_synonym", - "yojE" - ], - [ - "gene_synonym", - "yojC" - ], - [ - "gene_synonym", - "napA" - ], - [ - "gene_synonym", - "GI:16130143" - ], - [ - "gene_synonym", - "b2206" - ] - ], - "dna_sequence": "ATGAAACTCAGTCGTCGTAGCTTTATGAAAGCTAACGCCGTTGCGGCCGCTGCGGCGGCTGCCGGTCTCAGCGTGCCGGGCGTTGCCCGCGCCGTTGTTGGTCAGCAGGAAGCCATCAAATGGGATAAAGCGCCGTGCCGTTTCTGCGGTACTGGTTGCGGCGTTCTGGTCGGAACGCAGCAGGGACGTGTGGTGGCCTGTCAGGGCGACCCGGACGCACCGGTTAACCGTGGCCTGAACTGCATTAAGGGCTATTTCCTGCCCAAAATCATGTACGGTAAAGACCGTTTGACGCAGCCGCTGCTGCGTATGAAAAACGGTAAATATGACAAAGAAGGCGAATTTACCCCAATCACCTGGGATCAGGCCTTCGATGTGATGGAAGAGAAATTCAAAACCGCCCTGAAAGAAAAAGGGCCGGAATCGATCGGTATGTTCGGTTCTGGTCAGTGGACTATCTGGGAAGGTTATGCCGCGTCCAAGCTGTTTAAAGCGGGCTTCCGTTCGAACAACATCGACCCGAACGCGCGTCACTGTATGGCGTCGGCAGTAGTTGGCTTTATGCGTACCTTTGGTATGGATGAGCCGATGGGCTGCTATGACGACATCGAGCAGGCTGACGCGTTTGTGCTGTGGGGCGCAAACATGGCGGAAATGCACCCGATCCTCTGGTCGCGCATCACTAACCGTCGTCTCTCTAACCAGAACGTCACCGTGGCGGTGCTTTCTACCTACCAGCATCGTAGCTTCGAGCTGGCGGATAACGGCATCATCTTTACGCCGCAATCTGACCTGGTGATCCTGAACTACATCGCCAACTATATCATTCAAAACAATGCGATAAATCAGGACTTCTTCAGCAAGCACGTTAACCTGCGCAAAGGGGCGACGGACATCGGCTACGGTTTACGTCCGACCCATCCGCTGGAAAAAGCAGCGAAGAATCCGGGTTCTGACGCCTCCGAACCGATGAGCTTTGAAGATTACAAAGCCTTCGTTGCCGAGTATACGCTGGAAAAAACTGCCGAAATGACCGGCGTGCCGAAAGACCAGTTAGAACAACTGGCGCAGCTGTATGCCGATCCGAACAAGAAAGTCATCTCCTACTGGACGATGGGCTTCAACCAGCATACTCGTGGCGTGTGGGCTAACAACCTGGTCTACAACCTGCACCTGCTGACCGGCAAAATTTCCCAGCCGGGTTGCGGTCCGTTCTCCCTGACCGGGCAACCTTCTGCGTGTGGTACTGCGCGTGAAGTGGGCACCTTTGCTCACCGTCTGCCTGCGGACATGGTGGTGACCAACGAGAAACACCGTGATATCTGCGAGAAGAAGTGGAATATCCCGAGCGGCACCATTCCGGCGAAAATCGGTCTGCACGCGGTGGCACAAGACCGTGCGCTGAAAGACGGCAAACTGAATGTTTACTGGACCATGTGTACCAACAACATGCAGGCCGGGCCGAACATCAATGAAGAGCGTATGCCGGGCTGGCGCGATCCGCGCAACTTCATCATCGTCTCCGATCCGTATCCGACAGTCAGTGCGCTGGCCGCCGACTTGATCCTGCCGACCGCAATGTGGGTAGAGAAAGAGGGCGCTTACGGTAACGCCGAACGCCGTACTCAGTTCTGGCGTCAACAGGTACAGGCACCGGGCGAAGCGAAATCGGATCTCTGGCAGTTAGTCCAGTTCTCCCGCCGCTTCAAAACTGAAGAAGTATGGCCGGAAGATCTGCTGGCGAAGAAACCGGAACTGCGTGGCAAAACGCTGTACGAAGTGCTGTATGCCACACCGGAAGTGAGCAAATTCCCGGTATCCGAACTGGCGGAAGATCAGCTGAACGATGAATCCCGCGAGCTGGGCTTCTATCTGCAAAAAGGGCTGTTCGAAGAGTACGCATGGTTTGGTCGCGGTCACGGTCACGATCTGGCACCGTTCGATGACTACCACAAAGCGCGCGGTCTGCGCTGGCCGGTGGTGAACGGTAAAGAAACGCAGTGGCGTTACAGCGAAGGTAACGACCCGTACGTGAAAGCGGGCGAAGGCTATAAGTTCTACGGTAAACCGGATGGCAAAGCGGTGATCTTCGCACTGCCATTCGAACCGGCGGCGGAAGCACCGGATGAAGAGTACGACCTGTGGCTCTCTACCGGACGCGTTCTGGAGCACTGGCACACCGGCAGTATGACTCGCCGTGTACCAGAACTGCACCGCGCCTTCCCGGAAGCGGTCCTGTTTATTCACCCGCTGGATGCGAAAGCGCGCGATCTGCGCCGTGGCGACAAAGTGAAAGTGGTTTCTCGCCGTGGCGAAGTGATCTCGATTGTTGAAACGCGCGGTCGTAACCGTCCGCCACAGGGCCTGGTGTACATGCCGTTCTTCGACGCCGCACAGTTGGTTAACAAACTGACGCTGGATGCGACCGATCCGCTCTCGAAAGAGACGGACTTCAAGAAGTGCGCGGTCAAACTGGAGAAGGTGTAA", 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"MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKAPCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLLRMKNGKYDKEGEFTPITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAASKLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAEMHPILWSRITNRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYIIQNNAINQDFFSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVAEYTLEKTAEMTGVPKDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHLLTGKISQPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPSGTIPAKIGLHAVAQDRALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVSDPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFSRRFKTEEVWPEDLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFYLQKGLFEEYAWFGRGHGHDLAPFDDYHKARGLRWPVVNGKETQWRYSEGNDPYVKAGEGYKFYGKPDGKAVIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRAFPEAVLFIHPLDAKARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPFFDAAQLVNKLTLDATDPLSKETDFKKCAVKLEKV", - "protein_translation_length": 828, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416711.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9I5" - ], - [ - "gene_synonym", - "JW2195" - ], - [ - "gene_synonym", - "GeneID:945187" - ], - [ - "gene_synonym", - "ECK2199" - ], - [ - "gene_synonym", - "yojF" - ], - [ - "gene_synonym", - "ASAP:ABE-0007291" - ], - [ - "gene_synonym", - "napD" - ], - [ - "gene_synonym", - "EcoGene:EG12143" - ], - [ - "gene_synonym", - "b2207" - ], - [ - "gene_synonym", - "GI:16130144" - ] - ], - "dna_sequence": "ATGCACACTAACTGGCAAGTTTGCAGCCTGGTCGTGCAGGCCAAAAGCGAACGAATTTCAGACATCAGCACCCAACTGAACGCCTTTCCCGGCTGTGAAGTTGCTGTCAGCGACGCGCCGAGCGGTCAGTTGATTGTGGTGGTGGAAGCAGAAGACAGCGAAACGCTGATCCAAACCATTGAGTCAGTACGCAACGTAGAGGGCGTGCTGGCGGTGTCGCTGGTTTATCACCAGCAGGAAGAGCAAGGTGAGGAAACACCATGA", - "dna_sequence_length": 264, - "functions": [ - "assembly protein for periplasmic nitrate reductase" - ], - "id": "CDS_2191", - "location": [ - [ - "NC_000913", - 2303013, - "-", - 264 - ] - ], - "md5": "a13d3d3520884266a90b2defe1aac9b1", - "parent_gene": "", - "protein_md5": "6adef57f29618c27bdcb14c1b0c08dfe", - "protein_translation": "MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP", - "protein_translation_length": 87, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2200" - ], - [ - "gene_synonym", - "JW2196" - ], - [ - "gene_synonym", - "yojG" - ], - [ - "gene_synonym", - "EcoGene:EG12068" - ], - [ - "gene_synonym", - "GeneID:946813" - ], - [ - "gene_synonym", - "napF" - ], - [ - "gene_synonym", - "b2208" - ], - [ - "gene_synonym", - "NP_416712.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAL0" - ], - [ - "gene_synonym", - "ASAP:ABE-0007293" - ], - [ - "gene_synonym", - "GI:16130145" - ] - ], - "dna_sequence": "GTGAAGATTGATGCATCCCGTCGGGGCATACTCACTGGTCGCTGGCGCAAAGCCAGTAACGGTATCCGTCCGCCCTGGTCCGGTGATGAATCTCATTTTCTGACCCATTGCACCCGCTGCGACGCCTGTATTAATGCTTGTGAAAACAACATTCTGCAACGCGGCGCGGGCGGCTATCCGAGCGTTAATTTCAAAAATAACGAGTGCAGCTTCTGTTACGCCTGCGCGCAGGCTTGCCCCGAATCGCTATTTTCTCCGCGCCACACCAGGGCCTGGGATTTGCAGTTCACCATCGGGGACGCGTGCCTGGCGTATCAGTCAGTTGAATGCCGCCGCTGTCAGGATAGCTGTGAGCCAATGGCAATTATCTTTCGCCCGACGCTCTCCGGGATCTACCAGCCGCAACTTAATAGCCAACTTTGCAACGGATGTGGAGCATGTGCAGCCAGCTGTCCGGTATCAGCCATAACTGCGGAGTATCTCCATGCACACTAA", - "dna_sequence_length": 495, - "functions": [ - "ferredoxin-type protein, role in electron transfer to periplasmic nitrate reductase NapA" - ], - "id": "CDS_2192", - "location": [ - [ - "NC_000913", - 2303497, - "-", - 495 - ] - ], - "md5": "fa2847b0e499340cd0d82e1a89c7bf74", - "parent_gene": "", - "protein_md5": "0f0b78162321b65a29aab5d73a375452", - "protein_translation": "MKIDASRRGILTGRWRKASNGIRPPWSGDESHFLTHCTRCDACINACENNILQRGAGGYPSVNFKNNECSFCYACAQACPESLFSPRHTRAWDLQFTIGDACLAYQSVECRRCQDSCEPMAIIFRPTLSGIYQPQLNSQLCNGCGACAASCPVSAITAEYLHAH", - "protein_translation_length": 164, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2201" - ], - [ - "gene_synonym", - "JW2197" - ], - [ - "gene_synonym", - "eco" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23827" - ], - [ - "gene_synonym", - "GeneID:946700" - ], - [ - "gene_synonym", - "NP_416713.1" - ], - [ - "gene_synonym", - "b2209" - ], - [ - "gene_synonym", - "ASAP:ABE-0007297" - ], - [ - "gene_synonym", - "eti" - ], - [ - "gene_synonym", - "EcoGene:EG10255" - ], - [ - "gene_synonym", - "GI:16130146" - ] - ], - "dna_sequence": "ATGAAGACCATTCTACCTGCAGTATTGTTTGCCGCTTTCGCTACCACTTCCGCCTGGGCGGCAGAAAGCGTCCAGCCACTGGAAAAAATCGCGCCTTATCCACAAGCTGAAAAAGGGATGAAGCGTCAGGTGATTCAGTTAACCCCGCAAGAAGATGAATCTACCCTGAAAGTAGAACTGTTAATCGGTCAGACGCTGGAAGTCGATTGCAATTTGCATCGTCTCGGCGGGAAGCTGGAAAACAAAACGCTGGAAGGCTGGGGCTATGATTATTATGTCTTTGATAAAGTCAGTTCCCCGGTTTCAACGATGATGGCCTGCCCGGATGGCAAGAAAGAGAAGAAATTTGTCACCGCGTATCTGGGCGATGCTGGAATGCTGCGTTACAACAGCAAGCTGCCGATCGTGGTGTATACGCCAGACAATGTAGATGTGAAGTACCGCGTCTGGAAGGCGGAAGAGAAAATTGACAACGCGGTAGTTCGCTAA", - "dna_sequence_length": 489, - "functions": [ - "ecotin, a serine protease inhibitor" - ], - "id": "CDS_2193", - "location": [ - [ - "NC_000913", - 2303905, - "+", - 489 - ] - ], - "md5": "c587c952d08a2a1cfb9333b0aefd79af", - "parent_gene": "", - "protein_md5": "52f8ff6d7ba88d7ba836b845ad79c30c", - "protein_translation": "MKTILPAVLFAAFATTSAWAAESVQPLEKIAPYPQAEKGMKRQVIQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLENKTLEGWGYDYYVFDKVSSPVSTMMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAVVR", - "protein_translation_length": 162, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2202" - ], - [ - "gene_synonym", - "b2210" - ], - [ - "gene_synonym", - "JW2198" - ], - [ - "gene_synonym", - "ASAP:ABE-0007300" - ], - [ - "gene_synonym", - "mqo" - ], - [ - "gene_synonym", - "EcoGene:EG12069" - ], - [ - "gene_synonym", - "GI:16130147" - ], - [ - "gene_synonym", - "NP_416714.1" - ], - [ - "gene_synonym", - "GeneID:946702" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33940" - ], - [ - "gene_synonym", - "yojH" - ] - ], - "dna_sequence": "ATGAAAAAAGTGACTGCCATGCTCTTCTCGATGGCCGTGGGGCTTAATGCCGTTTCGATGGCGGCAAAAGCGAAAGCGTCCGAGGAGCAGGAAACTGATGTACTGTTGATTGGCGGCGGCATTATGAGCGCCACGTTGGGGACCTATTTACGCGAGCTGGAGCCTGAATGGTCGATGACCATGGTGGAGCGCCTGGAGGGTGTCGCGCAGGAGAGTTCGAACGGCTGGAATAACGCCGGAACCGGGCATTCTGCACTGATGGAACTGAACTACACCCCGCAAAACGCCGATGGCAGCATCAGTATTGAAAAAGCAGTCGCCATTAACGAAGCATTTCAGATTTCCCGCCAGTTCTGGGCGCACCAGGTTGAGCGCGGCGTGCTGCGTACTCCGCGTTCATTTATCAATACCGTTCCGCATATGAGCTTTGTCTGGGGCGAGGATAACGTCAATTTCCTGCGCGCCCGTTACGCCGCGTTGCAACAAAGCTCGCTGTTTCGCGGTATGCGTTACTCTGAAGATCACGCGCAGATCAAAGAGTGGGCACCGTTAGTGATGGAAGGGCGCGATCCGCAACAGAAAGTGGCAGCCACGCGTACGGAAATTGGTACCGATGTGAACTACGGCGAGATCACCCGCCAGTTAATTGCTTCCTTGCAGAAGAAATCTAACTTCTCGCTGCAACTCAGCAGCGAAGTCCGCGCCCTAAAGCGTAATGACGATAACACCTGGACCGTTACCGTTGCCGATCTGAAAAATGGCACTGCACAGAACATTCGTGCCAAATTTGTCTTTATCGGCGCGGGCGGTGCGGCGCTGAAGCTGTTACAGGAATCGGGGATTCCGGAAGCGAAAGACTACGCCGGTTTCCCGGTGGGCGGACAGTTCCTTGTTTCGGAAAACCCGGACGTGGTTAATCACCATCTGGCGAAGGTTTACGGTAAAGCATCCGTTGGCGCACCACCGATGTCGGTTCCGCATATCGATACCCGCGTTCTGGACGGTAAACGCGTAGTGCTGTTTGGGCCATTTGCCACCTTCTCAACCAAATTCCTCAAAAACGGTTCATTGTGGGATCTAATGAGTTCCACCACCACCTCTAACGTGATGCCGATGATGCACGTCGGGCTGGATAATTTCGATCTGGTGAAATATCTGGTGAGTCAGGTGATGTTGAGTGAAGAGGATCGTTTTGAAGCGTTGAAAGAGTACTATCCGCAGGCGAAAAAAGAGGACTGGCGTTTGTGGCAAGCGGGGCAGCGCGTGCAGATTATCAAGCGTGATGCCGAGAAAGGTGGCGTACTGCGTCTGGGTACTGAAGTCGTCAGTGACCAGCAAGGAACCATTGCCGCGCTCCTGGGGGCATCGCCAGGGGCGTCAACCGCCGCGCCGATTATGTTGAATCTGCTGGAAAAAGTATTTGGCGATCGTGTTTCCAGCCCGCAATGGCAGGCTACGTTGAAAGCGATCGTTCCGTCTTATGGACGCAAGCTGAACGGTGATGTAGCGGCAACAGAACGCGAGTTGCAGTACACCAGCGAAGTGCTGGGGTTGAACTACGACAAGCCGCAGGCAGCAGATAGTACGCCGAAACCGCAGTTGAAACCGCAACCCGTTCAAAAAGAAGTGGCGGATATTGCGTTGTAA", 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"ASAP:ABE-0007303" - ], - [ - "gene_synonym", - "ECK2203" - ], - [ - "gene_synonym", - "b2211" - ], - [ - "gene_synonym", - "NP_416715.1" - ], - [ - "gene_synonym", - "GeneID:946705" - ], - [ - "gene_synonym", - "JW2199" - ], - [ - "gene_synonym", - "GI:16130148" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33941" - ], - [ - "gene_synonym", - "EcoGene:EG12070" - ], - [ - "gene_synonym", - "yojJ" - ], - [ - "gene_synonym", - "yojI" - ] - ], - "dna_sequence": "ATGGAACTTCTTGTACTTGTCTGGCGGCAGTATCGCTGGCCATTTATCAGTGTGATGGCGCTAAGCCTCGCCAGTGCGGCATTAGGCATTGGCTTAATTGCTTTTATCAATCAGCGCCTTATCGAAACGGCGGATACCAGTCTGCTGGTGTTGCCGGAGTTTCTGGGATTATTGCTGCTGTTGATGGCAGTCACTCTCGGATCGCAACTGGCGCTCACCACTTTGGGGCATCACTTCGTTTACCGACTGCGTAGTGAATTTATCAAGCGGATTCTGGATACTCACGTCGAGCGCATTGAACAACTCGGTAGCGCCTCGTTGCTGGCGGGGTTAACCAGCGATGTGCGCAATATCACCATTGCTTTTGTGCGTCTGCCGGAACTGGTGCAGGGGATCATTCTCACTATCGGTTCAGCGGCGTATCTGTGGATGCTGTCGGGCAAAATGTTGCTGGTAACGGCTATCTGGATGGCGATCACCATCTGGGGCGGTTTTGTGCTGGTGGCGCGGGTGTACAAACATATGGCGACCCTGCGTGAAACCGAAGACAAGCTGTACACGGATTTTCAAACTGTACTTGAAGGGCGCAAAGAGCTGACTCTGAACCGGGAACGCGCCGAGTATGTGTTTAACAACCTCTACATTCCTGATGCGCAAGAGTATCGCCACCATATTATTCGCGCAGACACCTTCCATCTTAGTGCCGTGAACTGGTCAAACATCATGATGCTGGGCGCAATCGGCCTGGTGTTCTGGATGGCGAACAGCCTCGGTTGGGCTGATACCAACGTTGCCGCGACCTATTCGTTGACGCTTTTATTCCTGCGTACGCCGCTGCTTTCGGCGGTTGGCGCATTGCCGACGCTGCTGACGGCGCAGGTGGCGTTTAACAAGCTGAACAAATTCGCGCTCGCGCCTTTCAAAGCAGAGTTTCCGCGCCCGCAGGCGTTTCCCAACTGGCAAACGCTGGAGCTGCGTAACGTGACGTTTGCTTATCAGGATAACGCGTTTTCCGTTGGTCCGATTAATCTCACCATCAAACGTGGCGAGCTGCTGTTTCTGATTGGCGGCAACGGTAGCGGAAAATCGACGCTGGCGATGTTGTTGACGGGCTTGTATCAGCCACAAAGCGGCGAAATCTTGCTGGATGGCAAACCTGTCAGCGGCGAACAACCGGAAGATTATCGCAAACTGTTTTCGGCAGTGTTTACCGATGTCTGGCTGTTTGATCAACTGCTGGGGCCGGAGGGTAAACCCGCTAACCCGCAACTGGTTGAGAAGTGGCTGGCGCAGCTGAAAATGGCTCATAAGCTTGAGTTAAGCAACGGGCGTATTGTTAACCTGAAGTTATCAAAAGGGCAGAAAAAACGCGTGGCGCTGTTGCTGGCGCTGGCAGAAGAACGCGATATTATCCTGCTGGATGAATGGGCGGCGGATCAGGATCCACACTTCCGTCGTGAGTTTTATCAGGTGTTGCTGCCGCTGATGCAGGAGATGGGTAAAACTATTTTCGCTATCAGTCATGATGATCATTACTTTATCCACGCCGACCGCCTGCTGGAAATGCGCAATGGGCAACTTAGCGAGCTGACGGGCGAAGAGCGCGATGCCGCTTCGCGTGATGCCGTTGCCCGGACGGCATAA", 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"ECK2204" - ], - [ - "gene_synonym", - "GeneID:946708" - ], - [ - "gene_synonym", - "b2212" - ], - [ - "gene_synonym", - "NP_416716.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007308" - ], - [ - "gene_synonym", - "aidD" - ], - [ - "gene_synonym", - "GI:16130149" - ], - [ - "gene_synonym", - "EcoGene:EG10037" - ], - [ - "gene_synonym", - "alkB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05050" - ], - [ - "gene_synonym", - "JW2200" - ] - ], - "dna_sequence": "ATGTTGGATCTGTTTGCCGATGCTGAACCGTGGCAAGAGCCACTGGCGGCTGGTGCGGTAATTTTACGGCGTTTTGCTTTTAACGCTGCGGAGCAACTGATCCGCGATATTAATGACGTTGCCAGCCAGTCGCCGTTTCGCCAGATGGTCACCCCCGGGGGATATACCATGTCGGTGGCGATGACCAACTGTGGGCATCTGGGCTGGACGACCCATCGGCAAGGTTATCTCTATTCGCCCATTGATCCGCAAACAAATAAACCGTGGCCCGCCATGCCACAGAGTTTTCATAATTTATGTCAACGTGCGGCTACGGCGGCGGGCTATCCAGATTTCCAGCCAGATGCTTGTCTTATCAACCGCTACGCTCCTGGCGCGAAACTGTCGCTGCATCAGGATAAAGACGAACCGGATCTGCGCGCGCCAATTGTTTCTGTTTCTCTGGGCTTACCCGCGATTTTTCAATTTGGCGGCCTGAAACGAAATGATCCGCTCAAACGTTTGTTGTTGGAACATGGCGATGTGGTGGTATGGGGCGGTGAATCGCGGCTGTTTTATCACGGTATTCAACCGTTGAAAGCGGGGTTTCATCCACTCACCATCGACTGCCGCTACAACCTGACATTCCGTCAGGCAGGTAAAAAAGAATAA", - "dna_sequence_length": 651, - "functions": [ - "oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions" - ], - "id": "CDS_2196", - "location": [ - [ - "NC_000913", - 2309341, - "-", - 651 - ] - ], - "md5": "f57e289aa307285ab8c18299efb2c6e2", - "parent_gene": "", - "protein_md5": "62196a7ab4e9074e1f8392a8799b6e44", - "protein_translation": "MLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQSPFRQMVTPGGYTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFHPLTIDCRYNLTFRQAGKKE", - "protein_translation_length": 216, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007311" - ], - [ - "gene_synonym", - "ECK2205" - ], - [ - "gene_synonym", - "b2213" - ], - [ - "gene_synonym", - "GeneID:946710" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06134" - ], - [ - "gene_synonym", - "NP_416717.1" - ], - [ - "gene_synonym", - "JW2201" - ], - [ - "gene_synonym", - "ada" - ], - [ - "gene_synonym", - "EcoGene:EG10029" - ], - [ - "gene_synonym", - "GI:16130150" - ] - ], - "dna_sequence": "ATGAAAAAAGCCACATGCTTAACTGACGATCAACGCTGGCAATCTGTCTTAGCCCGCGACCCGAATGCCGACGGCGAATTCGTTTTCGCCGTGCGTACCACAGGCATCTTTTGCCGTCCGTCTTGCCGCGCCAGACATGCTTTGCGGGAAAACGTCTCCTTCTACGCAAATGCCAGCGAGGCACTCGCCGCTGGCTTTCGCCCCTGCAAACGTTGTCAGCCAGAAAAAGCCAATGCCCAGCAACATCGGTTGGATAAAATCACCCACGCGTGTCGACTGCTGGAACAGGAAACGCCTGTAACGCTGGAAGCCTTAGCCGACCAGGTGGCGATGAGTCCATTTCATCTACATCGGTTGTTTAAAGCGACTACCGGAATGACGCCTAAAGCCTGGCAACAGGCCTGGCGCGCTCGCCGTTTGCGCGAATCGCTGGCGAAAGGGGAGAGCGTGACGACGTCTATTCTTAACGCCGGATTCCCCGACAGCAGCAGTTACTATCGCAAAGCTGACGAAACGCTGGGCATGACGGCTAAACAATTCCGTCACGGTGGCGAAAATCTGGCGGTGCGTTACGCGCTGGCTGATTGTGAGCTGGGTCGTTGCCTGGTGGCAGAAAGCGAGCGGGGGATTTGCGCGATATTGCTGGGCGATGATGACGCGACACTAATCAGCGAGTTGCAGCAGATGTTTCCCGCTGCCGACAACGCGCCTGCCGATCTGATGTTTCAGCAACATGTGCGTGAAGTGATCGCCAGCCTCAATCAACGCGATACGCCGCTGACGTTACCGCTGGACATTCGCGGCACTGCTTTTCAGCAACAAGTCTGGCAGGCACTGCGCACGATACCTTGCGGTGAAACCGTCAGTTATCAGCAACTGGCTAACGCCATCGGCAAACCGAAAGCGGTACGGGCCGTTGCCAGCGCCTGTGCCGCCAACAAGCTGGCTATCATAATACCCTGTCATCGGGTGGTCCGTGGTGATGGCACACTTTCCGGTTACCGCTGGGGCGTGTCGCGTAAAGCGCAACTGCTGCGCCGCGAAGCTGAAAATGAGGAGAGGTAA", 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- "gene_synonym", - "JW5368" - ], - [ - "gene_synonym", - "GeneID:946711" - ], - [ - "gene_synonym", - "apbE" - ], - [ - "gene_synonym", - "EcoGene:EG12073" - ], - [ - "gene_synonym", - "yojL" - ], - [ - "gene_synonym", - "yojK" - ], - [ - "gene_synonym", - "NP_416718.1" - ], - [ - "gene_synonym", - "GI:16130151" - ] - ], - "dna_sequence": "ATGGAAATAAGCTTTACCCGCGTGGCACTGCTGGCTGCCGCGCTCTTCTTTGTTGGTTGCGATCAAAAACCACAACCCGCCAAAACCCACGCTACTGAAGTTACCGTTCTTGAAGGCAAAACTATGGGTACCTTCTGGCGTGCCAGCATCCCGGGCATTGACGCCAAACGCAGCGCCGAACTTAAAGAAAAGATTCAGACCCAACTGGACGCCGACGATCAGCTGCTTTCGACCTATAAAAAAGATTCCGCGCTGATGCGCTTTAACGACTCGCAAAGTTTATCGCCGTGGCCGGTAAGTGAAGCGATGGCCGATATCGTCACCACCTCGCTGCGCATTGGCGCGAAGACCGATGGCGCGATGGATATAACCGTCGGGCCGCTGGTGAATCTGTGGGGCTTTGGCCCGGAACAACAGCCGGTTCAAATTCCGAGCCAGGAACAGATCGATGCGATGAAAGCCAAAACCGGCTTACAGCACCTGACGGTCATCAATCAGTCGCATCAGCAATATCTGCAAAAAGACCTGCCGGATTTATATGTCGATCTCTCCACCGTCGGCGAAGGCTATGCGGCCGATCATTTGGCACGCTTGATGGAGCAGGAAGGGATTTCCCGCTATCTGGTGTCGGTGGGCGGCGCGCTGAACAGCCGTGGTATGAACGGTGAAGGCCTGCCGTGGCGGGTAGCGATTCAAAAACCAACCGATAAAGAAAACGCGGTTCAGGCTGTGGTGGATATCAACGGTCATGGGATTAGCACCTCTGGCAGCTACCGTAACTATTACGAACTGGACGGCAAACGTCTTTCCCATGTTATCGATCCGCAAACCGGGCGTCCCATCGAACACAATCTGGTATCCGTGACGGTGATTGCTCCGACGGCGCTGGAAGCCGATGCCTGGGATACTGGCTTGATGGTACTCGGGCCGGAGAAAGCTAAAGAGGTTGTTCGCCGGGAAGGGCTGGCGGTTTATATGATCACCAAAGAAGGCGATAGCTTTAAAACCTGGATGTCACCACAGTTTAAAAGCTTCCTTGTCAGCGAAAAAAATTAA", - "dna_sequence_length": 1056, - "functions": [ - "putative thiamine-synthetic flavin transferase lipoprotein" - ], - "id": "CDS_2198", - "location": [ - [ - "NC_000913", - 2311534, - "-", - 1056 - ] - ], - "md5": "db0bc1ff7994cd4c330406ec212572bd", - "parent_gene": "", - "protein_md5": "4650268831c5ca230e4a4e3f58ef3258", - "protein_translation": "MEISFTRVALLAAALFFVGCDQKPQPAKTHATEVTVLEGKTMGTFWRASIPGIDAKRSAELKEKIQTQLDADDQLLSTYKKDSALMRFNDSQSLSPWPVSEAMADIVTTSLRIGAKTDGAMDITVGPLVNLWGFGPEQQPVQIPSQEQIDAMKAKTGLQHLTVINQSHQQYLQKDLPDLYVDLSTVGEGYAADHLARLMEQEGISRYLVSVGGALNSRGMNGEGLPWRVAIQKPTDKENAVQAVVDINGHGISTSGSYRNYYELDGKRLSHVIDPQTGRPIEHNLVSVTVIAPTALEADAWDTGLMVLGPEKAKEVVRREGLAVYMITKEGDSFKTWMSPQFKSFLVSEKN", - "protein_translation_length": 351, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2215" - ], - [ - "gene_synonym", - "par" - ], - [ - "gene_synonym", - "ECK2207" - ], - [ - "gene_synonym", - "GeneID:946716" - ], - [ - "gene_synonym", - "EcoGene:EG10670" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06996" - ], - [ - "gene_synonym", - "butR" - ], - [ - "gene_synonym", - "JW2203" - ], - [ - "gene_synonym", - "ompC" - ], - [ - "gene_synonym", - "NP_416719.1" - ], - [ - "gene_synonym", - "GI:16130152" - ], - [ - "gene_synonym", - "ASAP:ABE-0007321" - ], - [ - "gene_synonym", - "meoA" - ] - ], - "dna_sequence": "ATGAAAGTTAAAGTACTGTCCCTCCTGGTCCCAGCTCTGCTGGTAGCAGGCGCAGCAAACGCTGCTGAAGTTTACAACAAAGACGGCAACAAATTAGATCTGTACGGTAAAGTAGACGGCCTGCACTATTTCTCTGACAACAAAGATGTAGATGGCGACCAGACCTACATGCGTCTTGGCTTCAAAGGTGAAACTCAGGTTACTGACCAGCTGACCGGTTACGGCCAGTGGGAATATCAGATCCAGGGCAACAGCGCTGAAAACGAAAACAACTCCTGGACCCGTGTGGCATTCGCAGGTCTGAAATTCCAGGATGTGGGTTCTTTCGACTACGGTCGTAACTACGGCGTTGTTTATGACGTAACTTCCTGGACCGACGTACTGCCAGAATTCGGTGGTGACACCTACGGTTCTGACAACTTCATGCAGCAGCGTGGTAACGGCTTCGCGACCTACCGTAACACTGACTTCTTCGGTCTGGTTGACGGCCTGAACTTTGCTGTTCAGTACCAGGGTAAAAACGGCAACCCATCTGGTGAAGGCTTTACTAGTGGCGTAACTAACAACGGTCGTGACGCACTGCGTCAAAACGGCGACGGCGTCGGCGGTTCTATCACTTATGATTACGAAGGTTTCGGTATCGGTGGTGCGATCTCCAGCTCCAAACGTACTGATGCTCAGAACACCGCTGCTTACATCGGTAACGGCGACCGTGCTGAAACCTACACTGGTGGTCTGAAATACGACGCTAACAACATCTACCTGGCTGCTCAGTACACCCAGACCTACAACGCAACTCGCGTAGGTTCCCTGGGTTGGGCGAACAAAGCACAGAACTTCGAAGCTGTTGCTCAGTACCAGTTCGACTTCGGTCTGCGTCCGTCCCTGGCTTACCTGCAGTCTAAAGGTAAAAACCTGGGTCGTGGCTACGACGACGAAGATATCCTGAAATATGTTGATGTTGGTGCTACCTACTACTTCAACAAAAACATGTCCACCTACGTTGACTACAAAATCAACCTGCTGGACGACAACCAGTTCACTCGTGACGCTGGCATCAACACTGATAACATCGTAGCTCTGGGTCTGGTTTACCAGTTCTAA", - "dna_sequence_length": 1104, - "functions": [ - "outer membrane porin protein C" - ], - "id": "CDS_2199", - "location": [ - [ - "NC_000913", - 2312749, - "-", - 1104 - ] - ], - "md5": "67b0bcf21135b6de1d4a77d9f0652349", - "parent_gene": "", - "protein_md5": "b6ec19d9dd21f506c99af675868a1b58", - "protein_translation": "MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNSAENENNSWTRVAFAGLKFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFGLVDGLNFAVQYQGKNGNPSGEGFTSGVTNNGRDALRQNGDGVGGSITYDYEGFGIGGAISSSKRTDAQNTAAYIGNGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSLAYLQSKGKNLGRGYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLVYQF", - "protein_translation_length": 367, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2216" - ], - [ - "gene_synonym", - "rcsD" - ], - [ - "gene_synonym", - "yojP" - ], - [ - "gene_synonym", - "yojQ" - ], - [ - "gene_synonym", - "ECK2209" - ], - [ - "gene_synonym", - "NP_416720.1" - ], - [ - "gene_synonym", - "JW2204" - ], - [ - "gene_synonym", - "EcoGene:EG12385" - ], - [ - "gene_synonym", - "GeneID:946717" - ], - [ - "gene_synonym", - "yojN" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39838" - ], - [ - "gene_synonym", - "GI:16130153" - ], - [ - "gene_synonym", - "ASAP:ABE-0007330" - ] - ], - "dna_sequence": "ATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTCGACATTACCCATGCTATCCAAAAGCGCGTCGATAACTGGCGTTACGTGACCTGGCAGATCTACGACAACATTGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTCTACTATCTGGAGAAACCACGCCGCAAAACGGAAGCGTTAATCTTTGGCTCTCACGACAACTCAACGCTTGAGATGACTCAGCGGATGTCCACTTATCTGGATACATTGTGGGGCGCAGAAAATGTACCGTGGTCGATGTATTACCTGAATGGTCAGGATAACAGTCTGGTGCTGATCTCAACCCTACCCCTTAAAGATCTCACCTCCGGATTTAAAGAATCGACCGTCAGCGACATTGTTGATTCACGTCGTGCAGAGATGTTGCAACAGGCCAACGCCCTCGATGAACGCGAAAGCTTTTCTAACATGCGCCGCCTGGCCTGGCAGAACGGTCATTACTTTACATTGCGTACTACCTTTAACCAGCCAGGACATCTGGCAACGGTCGTGGCTTTTGATCTGCCGATTAATGATTTGATCCCACCGGGTATGCCGCTGGACAGTTTCCGCCTTGAGCCAGACGCGACGGCAACGGGAAACAATGATAATGAGAAAGAAGGGACGGATAGCGTCAGTATCCACTTTAACAGTACGAAGATTGAAATCTCCTCGGCACTCAACTCTACCGATATGCGCCTGGTCTGGCAGGTTCCTTATGGCACCTTATTGCTGGATACGTTGCAAAACATTCTGCTGCCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGTTCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCGCATTTGAATCTGCAAAACATCACCACCATGGCGGAACAGCATCAGGGGATTATTCAGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGCACAGTCCCTGGCGGAGAGCGCGGCTAAACTCAACGCCCCGGAAAGCAAACAACTGGCGAATCAGGCAGATGTGCTGGTGCGGCTGGTTGATGAAATACAGTTAGCGAACATGCTTGCGGATGATAGCTGGAAAAGTGAGACGGTGCTGTTCTCCGTGCAGGATTTAATTGATGAAGTTGTGCCTTCAGTGTTGCCTGCCATCAAGCGTAAAGGTCTGCAACTGCTGATTAACAATCATCTGAAAGCACACGATATGCGCCGCGGCGATCGCGATGCCTTACGACGTATTTTGCTGCTACTGATGCAATATGCCGTGACCTCAACGCAATTGGGAAAAATCACCCTTGAGGTTGATCAGGATGAGTCCTCCGAAGACCGCCTGACGTTCCGCATTCTGGACACGGGAGAAGGCGTAAGTATTCATGAAATGGATAATTTGCACTTCCCGTTTATCAACCAGACCCAAAACGATCGCTATGGCAAGGCGGACCCGCTGGCATTCTGGCTGAGCGATCAACTGGCACGTAAACTGGGCGGTCATTTAAACATCAAAACGCGGGATGGGCTTGGTACACGCTACTCTGTGCATATCAAAATGCTCGCAGCTGACCCGGAAGTTGAAGAGGAAGAAGAGCGTTTACTGGATGATGTCTGCGTAATGGTGGATGTTACTTCGGCAGAAATTCGGAATATTGTCACTCGCCAGTTAGAAAATTGGGGTGCAACCTGTATCACACCCGATGAAAGATTAATTAGTCAAGATTATGATATCTTTTTAACGGATAATCCGTCTAATCTTACTGCCTCTGGCTTGCTTTTAAGCGATGATGAGTCTGGCGTACGGGAAATTGGGCCTGGTCAATTGTGCGTCAACTTCAATATGAGCAACGCTATGCAGGAAGCGGTCTTACAATTAATTGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGCGGCTATTATGCGCTCTTTGTAGACACAGTACCGGATGATGTTAAGAGGCTGTATACTGAAGCAGCAACCAGTGACTTTGCTGCGTTAGCCCAAACGGCTCATCGTCTTAAAGGCGTATTTGCCATGCTAAATCTGGTACCCGGCAAGCAGTTATGTGAAACGCTGGAACATCTGATTCGTGAGAAGGATGTTCCAGGAATAGAAAAATACATCAGCGACATTGACAGTTATGTCAAGAGCTTGCTGTAG", - "dna_sequence_length": 2673, - "functions": [ - "phosphotransfer intermediate protein in two-component regulatory system with RcsBC" - ], - "id": "CDS_2200", - "location": [ - [ - "NC_000913", - 2313488, - "+", - 2673 - ] - ], - "md5": "a4297ef4ea7e2bf1734296e88dacfa04", - "parent_gene": "", - "protein_md5": "7d54a80c4bb771f434751937e4c0707e", - "protein_translation": "MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAWLKDKSYQIVDITHAIQKRVDNWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYLEKPRRKTEALIFGSHDNSTLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLISTLPLKDLTSGFKESTVSDIVDSRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTTFNQPGHLATVVAFDLPINDLIPPGMPLDSFRLEPDATATGNNDNEKEGTDSVSIHFNSTKIEISSALNSTDMRLVWQVPYGTLLLDTLQNILLPLLLNIGLLALALFGYTTFRHFSSRSTENVPSTAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHLNLQNITTMAEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQAQRLYEKNQQGRMIFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQADVLVRLVDEIQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGDRDALRRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLHFPFINQTQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHIKMLAADPEVEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNPSNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLGGDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL", - "protein_translation_length": 890, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947441" - ], - [ - "gene_synonym", - "rcsB" - ], - [ - "gene_synonym", - "b2217" - ], - [ - "gene_synonym", - "viaA" - ], - [ - "gene_synonym", - "EcoGene:EG10821" - ], - [ - "gene_synonym", - "JW2205" - ], - [ - "gene_synonym", - "ECK2210" - ], - [ - "gene_synonym", - "NP_416721.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69407" - ], - [ - "gene_synonym", - "ASAP:ABE-0007333" - ], - [ - "gene_synonym", - "GI:16130154" - ] - ], - "dna_sequence": "ATGAACAATATGAACGTAATTATTGCCGATGACCATCCGATAGTCTTGTTCGGTATTCGCAAATCACTTGAGCAAATTGAGTGGGTGAATGTTGTCGGCGAATTTGAAGACTCTACAGCACTGATCAACAACCTGCCGAAACTGGATGCGCATGTGTTGATTACCGATCTCTCCATGCCTGGCGATAAGTACGGCGATGGCATTACCTTAATCAAGTACATCAAGCGCCATTTCCCAAGCCTGTCGATCATTGTTCTGACTATGAACAACAACCCGGCGATTCTTAGTGCGGTATTGGATCTGGATATCGAAGGGATCGTGCTGAAACAAGGTGCACCGACCGATCTGCCGAAAGCTCTCGCCGCGCTGCAGAAAGGGAAGAAATTTACCCCGGAAAGCGTTTCTCGCCTGTTGGAAAAAATCAGTGCTGGTGGTTACGGTGACAAGCGTCTCTCGCCAAAAGAGAGTGAAGTTCTGCGCCTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAA", - "dna_sequence_length": 651, - "functions": [ - "response regulator in two-component regulatory system with RcsC and YojN" - ], - "id": "CDS_2201", - "location": [ - [ - "NC_000913", - 2316177, - "+", - 651 - ] - ], - "md5": "6d02d2f75b6b3f3dee5cf962aaa143cc", - "parent_gene": "", - "protein_md5": "a4d0d02728a620eaca1f24bb25ab0c46", - "protein_translation": "MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD", - "protein_translation_length": 216, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2211" - ], - [ - "gene_synonym", - "rcsC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P14376" - ], - [ - "gene_synonym", - "JW5917" - ], - [ - "gene_synonym", - "b2218" - ], - [ - "gene_synonym", - "GeneID:948993" - ], - [ - "gene_synonym", - "NP_416722.2" - ], - [ - "gene_synonym", - "JW5920" - ], - [ - "gene_synonym", - "EcoGene:EG10822" - ], - [ - "gene_synonym", - "ASAP:ABE-0007336" - ], - [ - "gene_synonym", - "GI:145698285" - ] - ], - "dna_sequence": "TTGAAATACCTTGCTTCTTTTCGTACAACCCTGAAAGCCTCGCGCTACATGTTCAGAGCATTGGCGTTAGTGCTCTGGCTGTTGATTGCTTTTTCATCCGTTTTTTACATCGTTAATGCGTTACATCAGCGAGAATCGGAAATTCGTCAGGAATTTAATCTGAGTTCCGATCAGGCTCAGCGCTTTATTCAACGCACCTCTGATGTGATGAAAGAGCTGAAGTACATCGCCGAAAATCGCTTATCGGCAGAAAACGGTGTGCTTTCCCCGCGTGGACGAGAAACGCAGGCGGATGTGCCTGCGTTTGAACCGCTGTTTGCCGACTCCGATTGTTCCGCAATGAGTAACACCTGGCGAGGTTCTCTGGAGTCATTGGCGTGGTTTATGCGCTACTGGCGCGATAATTTTTCTGCGGCTTACGATCTAAACCGGGTATTTTTAATCGGCAGCGATAACCTCTGCATGGCCAATTTCGGTCTGCGTGATATGCCAGTGGAACGCGATACCGCGTTGAAAGCTTTGCATGAACGCATCAATAAATATCGAAATGCACCACAAGATGATAGCGGCAGTAACCTCTACTGGATCAGCGAAGGTCCGCGCCCTGGCGTCGGGTATTTTTACGCGTTGACGCCAGTTTATCTGGCGAACCGGTTGCAGGCGCTTTTGGGTGTCGAGCAGACCATCCGGATGGAGAACTTTTTCTTACCGGGTACGTTGCCGATGGGGGTTACCATTCTTGATGAAAATGGTCATACCCTGATTTCGCTTACCGGACCAGAAAGTAAAATTAAGGGCGATCCTCGCTGGATGCAGGAACGCTCCTGGTTTGGCTATACGGAAGGGTTCCGGGAGCTGGTGCTGAAGAAAAATCTGCCACCCTCATCGCTAAGCATCGTGTATTCGGTGCCGGTTGATAAGGTGCTGGAACGCATTCGCATGTTGATCCTTAACGCAATTTTGCTGAATGTGCTTGCCGGAGCTGCATTGTTTACTCTCGCACGGATGTACGAGCGACGTATTTTCATTCCGGCGGAAAGCGACGCCCTGCGACTGGAAGAACATGAGCAGTTCAATCGCAAGATTGTCGCCTCCGCGCCAGTGGGTATCTGCATTTTGCGTACCGCTGATGGCGTCAATATTTTAAGTAACGAACTGGCGCATACCTATCTCAATATGCTTACGCATGAGGACCGCCAACGACTGACGCAAATTATCTGTGGGCAGCAGGTCAATTTTGTTGATGTCCTGACCAGCAACAATACCAATCTGCAAATCAGCTTCGTCCATTCGCGCTATCGTAATGAAAACGTGGCCATTTGTGTGCTGGTGGATGTTTCTTCGCGCGTGAAGATGGAAGAGTCGTTGCAGGAGATGGCACAAGCAGCGGAACAGGCGAGCCAGTCAAAATCGATGTTCCTTGCCACCGTCAGTCATGAGCTGCGAACGCCGCTGTATGGCATTATCGGTAACCTGGATCTGTTGCAAACCAAAGAGTTACCGAAAGGCGTCGATCGGCTGGTGACGGCAATGAACAACTCTTCCAGCCTGTTGTTGAAAATTATCAGCGATATTCTCGATTTCTCGAAGATTGAATCGGAACAGTTGAAGATCGAACCGCGTGAGTTTTCACCGCGTGAAGTGATGAACCACATCACCGCCAACTATTTACCGCTGGTGGTACGCAAGCAGTTAGGCTTGTACTGCTTTATTGAACCGGATGTGCCAGTGGCCTTAAATGGCGACCCGATGCGTTTACAGCAGGTCATCTCCAACCTGTTGAGTAACGCCATAAAATTCACCGATACCGGCTGTATAGTTTTGCATGTTCGCGCGGATGGCGATTATCTCTCTATCCGTGTTCGCGATACCGGCGTGGGGATACCGGCGAAAGAAGTGGTGCGCTTGTTTGATCCCTTCTTCCAGGTCGGAACGGGCGTACAGCGTAATTTCCAGGGGACCGGTCTGGGTCTGGCGATTTGTGAAAAACTGATCAGCATGATGGACGGCGATATCTCGGTAGATTCAGAACCGGGAATGGGCAGCCAGTTTACCGTGCGTATTCCGTTGTACGGCGCTCAGTACCCGCAGAAAAAAGGCGTGGAAGGGTTGAGTGGTAAACGCTGCTGGCTGGCGGTCCGCAATGCGTCGCTCTGTCAGTTCCTGGAAACCAGTTTGCAGCGCAGCGGCATCGTCGTTACAACATACGAAGGGCAGGAACCGACTCCCGAAGATGTGTTGATCACTGACGAGGTAGTGAGTAAAAAATGGCAGGGCAGAGCGGTAGTGACCTTCTGTCGTCGCCATATTGGTATTCCGCTGGAGAAAGCGCCAGGGGAGTGGGTACACAGTGTGGCTGCTCCGCATGAGCTACCGGCATTGTTGGCGCGTATTTATTTGATCGAGATGGAGAGCGACGATCCTGCTAACGCTCTGCCGTCAACGGACAAAGCGGTCAGCGATAATGACGATATGATGATTCTGGTCGTGGATGATCATCCGATTAACCGGCGTTTGCTGGCAGATCAGTTGGGATCGTTGGGCTATCAATGTAAAACCGCGAATGATGGCGTCGATGCGCTTAATGTACTTAGCAAGAATCATATTGATATCGTGCTTAGCGACGTCAACATGCCAAATATGGATGGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGGGTCAGGAAATCGCGGGATTCGTAG", - "dna_sequence_length": 2850, - "functions": [ - "hybrid sensory kinase in two-component regulatory system with RcsB and YojN" - ], - "id": "CDS_2202", - "location": [ - [ - "NC_000913", - 2319876, - "-", - 2850 - ] - ], - "md5": "63e558c55a81ad7d5f621a5b9d3d125f", - "parent_gene": "", - "protein_md5": "7584f03cbc119d36152683daee2b6b16", - "protein_translation": "MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQRESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVPAFEPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGLRDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLANRLQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKGDPRWMQERSWFGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLARMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLNMLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRVKMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQEPTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARIYLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTLYAERVRKSRDS", - "protein_translation_length": 949, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2212" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q06067" - ], - [ - "gene_synonym", - "NP_416723.1" - ], - [ - "gene_synonym", - "atoS" - ], - [ - "gene_synonym", - "JW2213" - ], - [ - "gene_synonym", - "b2219" - ], - [ - "gene_synonym", - "EcoGene:EG11667" - ], - [ - "gene_synonym", - "GeneID:949011" - ], - [ - "gene_synonym", - "ASAP:ABE-0007341" - ], - [ - "gene_synonym", - "GI:16130156" - ] - ], - "dna_sequence": "ATGCATTATATGAAGTGGATTTATCCACGCCGCTTACGCAATCAAATGATCCTGATGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATCGTAGAAACGGAAGGACGTTCAGCAGTCTTATCTGAAAAAGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTGCCCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTCAGGCAGGCAGGTGCGCGGCGATATTTTGAATTCAATGCTCCCCATTGAGCGTAATGGTGAAATCCTCGGCTATATCTGGGCCAATGAATTAACCGAAGATATTCGCCGCCAGGCCTGGAAAATGGATGTGAGGATTATCATTGTGCTCACCGCTGGTTTGCTGATAAGCCTGCTGTTGATTGTCCTTTTCTCCCGTCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTGAAAACGCTGCCGATGGCGTCATTGCCATTGACCGCCAGGGTGATGTAACCACCATGAACCCAGCAGCAGAAGTTATCACTGGCTATCAACGCCATGAACTGGTAGGGCAGCCTTACTCCATGTTGTTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCGTGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTGATTTAACTGCCCGCAAAGAAACCCAGCGCCGCATGGCGCAAGCAGAACGCCTCGCCACACTGGGTGAGCTGATGGCTGGCGTCGCGCATGAAGTACGTAATCCGTTAACGGCTATTCGTGGTTATGTACAGATCTTGCGCCAACAAACCAGTGACCCAATACATCAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGTTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGAATATCCTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGA", - "dna_sequence_length": 1827, - "functions": [ - "sensory histidine kinase in two-component regulatory system with AtoC" - ], - "id": "CDS_2203", - "location": [ - [ - "NC_000913", - 2320043, - "+", - 1827 - ] - ], - "md5": "5ddaa3ae3809435db974c10522197f29", - "parent_gene": "", - "protein_md5": "0d1db145737dbbab38fa0857f2222708", - "protein_translation": "MHYMKWIYPRRLRNQMILMAILMVIVPTLTIGYIVETEGRSAVLSEKEKKLSAVVNLLNQALGDRYDLYIDLPREERIRALNAELAPITENITHAFPGIGAGYYNKMLDAIITYAPSALYQNNVGVTIAADHPGREVMRTNTPLVYSGRQVRGDILNSMLPIERNGEILGYIWANELTEDIRRQAWKMDVRIIIVLTAGLLISLLLIVLFSRRLSANIDIITDGLSTLAQNIPTRLPQLPGEMGQISQSVNNLAQALRETRTLNDLIIENAADGVIAIDRQGDVTTMNPAAEVITGYQRHELVGQPYSMLFDNTQFYSPVLDTLEHGTEHVALEISFPGRDRTIELSVTTSRIHNTHGEMIGALVIFSDLTARKETQRRMAQAERLATLGELMAGVAHEVRNPLTAIRGYVQILRQQTSDPIHQEYLSVVLKEIDSINKVIQQLLEFSRPRHSQWQQVSLNALVEETLVLVQTAGVQARVDFISELDNELSPINADRELLKQVLLNILINAVQAISARGKIRIQTWQYSDSQQAISIEDNGCGIDLSLQKKIFDPFFTTKASGTGLGLALSQRIINAHQGDIRVASLPGYGATFTLILPINPQGNQTV", - "protein_translation_length": 608, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2213" - ], - [ - "gene_synonym", - "NP_416724.1" - ], - [ - "gene_synonym", - "GeneID:947444" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q06065" - ], - [ - "gene_synonym", - "JW2214" - ], - [ - "gene_synonym", - "ASAP:ABE-0007343" - ], - [ - "gene_synonym", - "GI:16130157" - ], - [ - "gene_synonym", - "atoC" - ], - [ - "gene_synonym", - "Az" - ], - [ - "gene_synonym", - "b2220" - ], - [ - "gene_synonym", - "EcoGene:EG11668" - ] - ], - "dna_sequence": "ATGACTGCTATTAATCGCATCCTTATTGTGGATGATGAAGATAATGTTCGCCGTATGCTGAGCACCGCTTTTGCACTACAAGGATTCGAAACACATTGTGCGAACAACGGACGCACAGCATTACACCTGTTTGCCGATATTCACCCTGATGTGGTGTTGATGGATATCCGCATGCCAGAGATGGACGGCATCAAGGCACTAAAGGAGATGCGCAGCCATGAGACCCGGACACCCGTTATTCTGATGACGGCCTATGCGGAAGTGGAAACCGCCGTCGAAGCGCTACGCTGCGGAGCCTTCGACTATGTTATTAAACCGTTTGATCTCGATGAGTTGAATTTAATCGTTCAGCGCGCTTTACAACTCCAGTCAATGAAAAAAGAGATCCGTCATCTGCACCAGGCACTGAGCACCAGCTGGCAATGGGGGCACATTCTCACCAACAGCCCGGCGATGATGGACATCTGCAAAGACACCGCCAAAATTGCCCTTTCTCAGGCCAGCGTCTTGATTAGCGGTGAAAGCGGCACCGGGAAAGAGTTGATTGCCAGAGCGATTCACTACAATTCGCGGCGGGCAAAGGGGCCGTTCATTAAAGTCAACTGCGCGGCGCTGCCGGAATCGTTGCTCGAAAGTGAACTGTTTGGTCATGAAAAAGGTGCATTTACTGGTGCACAAACCTTGCGTCAGGGATTATTTGAACGAGCCAACGAAGGTACTCTGCTCCTCGACGAAATTGGCGAAATGCCGCTGGTACTACAAGCCAAATTACTACGCATTCTACAGGAACGGGAATTTGAACGGATTGGCGGCCATCAGACCATAAAAGTTGATATCCGCATCATTGCTGCCACCAACCGCGACTTGCAGGCAATGGTAAAAGAAGGCACCTTCCGTGAAGATCTCTTTTATCGCCTTAACGTTATTCATTTAATACTGCCGCCTCTGCGCGATCGCCGGGAAGATATTTCCCTGTTAGCTAATCACTTTTTGCAAAAATTCAGTAGTGAGAATCAGCGCGATATTATCGACATCGATCCGATGGCAATGTCACTGCTTACCGCCTGGTCATGGCCGGGAAATATTCGAGAGCTTTCCAACGTTATTGAACGCGCCGTCGTGATGAATTCAGGCCCGATCATTTTTTCTGAGGATCTTCCGCCACAGATTCGTCAGCCAGTCTGTAATGCTGGCGAGGTAAAAACAGCCCCTGTCGGTGAGCGTAATTTAAAAGAGGAAATTAAACGCGTCGAAAAACGCATCATTATGGAAGTGCTGGAACAACAAGAAGGAAACCGAACCCGCACTGCTTTAATGCTGGGCATCAGTCGCCGTGCATTGATGTATAAACTCCAGGAATACGGTATCGATCCGGCGGATGTATAA", - "dna_sequence_length": 1386, - "functions": [ - "fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein" - ], - "id": "CDS_2204", - "location": [ - [ - "NC_000913", - 2321866, - "+", - 1386 - ] - ], - "md5": "d1cc2b8a320956698c8c1a16399c3952", - "parent_gene": "", - "protein_md5": "01a1c8e9bf2bf553bb06f18e28c39619", - "protein_translation": "MTAINRILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPEMDGIKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRALQLQSMKKEIRHLHQALSTSWQWGHILTNSPAMMDICKDTAKIALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPGNIRELSNVIERAVVMNSGPIIFSEDLPPQIRQPVCNAGEVKTAPVGERNLKEEIKRVEKRIIMEVLEQQEGNRTRTALMLGISRRALMYKLQEYGIDPADV", - "protein_translation_length": 461, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416725.1" - ], - [ - "gene_synonym", - "ECK2214" - ], - [ - "gene_synonym", - "GeneID:947525" - ], - [ - "gene_synonym", - "JW2215" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76458" - ], - [ - "gene_synonym", - "ASAP:ABE-0007347" - ], - [ - "gene_synonym", - "EcoGene:EG11669" - ], - [ - "gene_synonym", - "GI:16130158" - ], - [ - "gene_synonym", - "b2221" - ], - [ - "gene_synonym", - "atoD" - ] - ], - "dna_sequence": "ATGAAAACAAAATTGATGACATTACAAGACGCCACCGGCTTCTTTCGTGACGGCATGACCATCATGGTGGGCGGATTTATGGGGATTGGCACTCCATCCCGCCTGGTTGAAGCATTACTGGAATCTGGTGTTCGCGACCTGACATTGATAGCCAATGATACCGCGTTTGTTGATACCGGCATCGGTCCGCTCATCGTCAATGGTCGAGTCCGCAAAGTGATTGCTTCACATATCGGCACCAACCCGGAAACAGGTCGGCGCATGATATCTGGTGAGATGGACGTCGTTCTGGTGCCGCAAGGTACGCTAATCGAGCAAATTCGCTGTGGTGGAGCTGGACTTGGTGGTTTTCTCACCCCAACGGGTGTCGGCACCGTCGTAGAGGAAGGCAAACAGACACTGACACTCGACGGTAAAACCTGGCTGCTCGAACGCCCACTGCGCGCCGACCTGGCGCTAATTCGCGCTCATCGTTGCGACACACTTGGCAACCTGACCTATCAACTTAGCGCCCGCAACTTTAACCCCCTGATAGCCCTTGCGGCTGATATCACGCTGGTAGAGCCAGATGAACTGGTCGAAACCGGCGAGCTGCAACCTGACCATATTGTCACCCCTGGTGCCGTTATCGACCACATCATCGTTTCACAGGAGAGCAAATAA", - "dna_sequence_length": 663, - "functions": [ - "acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit" - ], - "id": "CDS_2205", - "location": [ - [ - "NC_000913", - 2323447, - "+", - 663 - ] - ], - "md5": "087a07ad020517693a821f8d654d39cd", - "parent_gene": "", - "protein_md5": "d01941948f66f5161fac7a8827d20ba1", - "protein_translation": "MKTKLMTLQDATGFFRDGMTIMVGGFMGIGTPSRLVEALLESGVRDLTLIANDTAFVDTGIGPLIVNGRVRKVIASHIGTNPETGRRMISGEMDVVLVPQGTLIEQIRCGGAGLGGFLTPTGVGTVVEEGKQTLTLDGKTWLLERPLRADLALIRAHRCDTLGNLTYQLSARNFNPLIALAADITLVEPDELVETGELQPDHIVTPGAVIDHIIVSQESK", - "protein_translation_length": 220, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2215" - ], - [ - "gene_synonym", - "GeneID:946719" - ], - [ - "gene_synonym", - "JW2216" - ], - [ - "gene_synonym", - "ASAP:ABE-0007349" - ], - [ - "gene_synonym", - "NP_416726.1" - ], - [ - "gene_synonym", - "EcoGene:EG11670" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76459" - ], - [ - "gene_synonym", - "GI:16130159" - ], - [ - "gene_synonym", - "atoA" - ], - [ - "gene_synonym", - "b2222" - ] - ], - "dna_sequence": "ATGGATGCGAAACAACGTATTGCGCGCCGTGTGGCGCAAGAGCTTCGTGATGGTGACATCGTTAACTTAGGGATCGGTTTACCCACAATGGTCGCCAATTATTTACCGGAGGGTATTCATATCACTCTGCAATCGGAAAACGGCTTCCTCGGTTTAGGCCCGGTCACGACAGCGCATCCAGATCTGGTGAACGCTGGCGGGCAACCGTGCGGTGTTTTACCCGGTGCAGCCATGTTTGATAGCGCCATGTCATTTGCGCTAATCCGTGGCGGTCATATTGATGCCTGCGTGCTCGGCGGTTTGCAAGTAGACGAAGAAGCAAACCTCGCGAACTGGGTAGTGCCTGGGAAAATGGTGCCCGGTATGGGTGGCGCGATGGATCTGGTGACCGGGTCGCGCAAAGTGATCATCGCCATGGAACATTGCGCCAAAGATGGTTCAGCAAAAATTTTGCGCCGCTGCACCATGCCACTCACTGCGCAACATGCGGTGCATATGCTGGTTACTGAACTGGCTGTCTTTCGTTTTATTGACGGCAAAATGTGGCTCACCGAAATTGCCGACGGGTGTGATTTAGCCACCGTGCGTGCCAAAACAGAAGCTCGGTTTGAAGTCGCCGCCGATCTGAATACGCAACGGGGTGATTTATGA", - "dna_sequence_length": 651, - "functions": [ - "acetyl-CoA:acetoacetyl-CoA transferase, beta subunit" - ], - "id": "CDS_2206", - "location": [ - [ - "NC_000913", - 2324109, - "+", - 651 - ] - ], - "md5": "70ef7d12a437d0adf83d214cdeff2031", - "parent_gene": "", - "protein_md5": "7ab5c96ce88776428c8b6e0085c2e8f8", - "protein_translation": "MDAKQRIARRVAQELRDGDIVNLGIGLPTMVANYLPEGIHITLQSENGFLGLGPVTTAHPDLVNAGGQPCGVLPGAAMFDSAMSFALIRGGHIDACVLGGLQVDEEANLANWVVPGKMVPGMGGAMDLVTGSRKVIIAMEHCAKDGSAKILRRCTMPLTAQHAVHMLVTELAVFRFIDGKMWLTEIADGCDLATVRAKTEARFEVAADLNTQRGDL", - "protein_translation_length": 216, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2216" - ], - [ - "gene_synonym", - "GI:16130160" - ], - [ - "gene_synonym", - "GeneID:946721" - ], - [ - "gene_synonym", - "JW2217" - ], - [ - "gene_synonym", - "NP_416727.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76460" - ], - [ - "gene_synonym", - "ASAP:ABE-0007353" - ], - [ - "gene_synonym", - "EcoGene:EG11671" - ], - [ - "gene_synonym", - "b2223" - ], - [ - "gene_synonym", - "atoE" - ] - ], - "dna_sequence": "ATGATTGGTCGCATATCGCGTTTTATGACGCGTTTTGTCAGCCGGTGGCTTCCCGATCCACTGATCTTTGCCATGTTGCTGACATTGCTAACATTCGTGATCGCGCTTTGGTTAACACCACAAACGCCGATCAGCATGGTGAAAATGTGGGGTGACGGTTTCTGGAACTTGCTGGCGTTTGGTATGCAGATGGCGCTTATCATCGTTACCGGTCATGCCCTTGCCAGCTCTGCTCCGGTGAAAAGTTTGCTGCGTACTGCCGCCTCCGCCGCAAAGACGCCCGTACAGGGCGTCATGCTGGTCACTTTCTTCGGTTCAGTCGCTTGTGTCATCAACTGGGGATTTGGTTTGGTTGTCGGCGCAATGTTTGCCCGTGAAGTCGCCCGGCGAGTCCCCGGTTCTGATTATCCGTTGCTCATTGCCTGCGCCTACATTGGTTTTCTCACCTGGGGTGGCGGCTTCTCTGGATCAATGCCTCTGTTGGCTGCAACACCGGGCAACCCGGTTGAGCATATCGCCGGGCTGATCCCGGTGGGCGATACTCTGTTCAGTGGTTTTAACATTTTCATCACTGTGGCGTTGATTGTGGTGATGCCATTTATCACCCGCATGATGATGCCAAAACCGTCTGACGTGGTGAGTATCGATCCAAAACTACTCATGGAAGAGGCTGATTTTCAAAAGCAGCTACCGAAAGATGCCCCACCATCCGAGCGACTGGAAGAAAGCCGCATTCTGACGTTGATCATCGGCGCACTCGGTATCGCTTACCTTGCGATGTACTTCAGCGAACATGGCTTCAACATCACCATCAATACCGTCAACCTGATGTTTATGATTGCGGGTCTGCTGCTACATAAAACGCCAATGGCTTATATGCGTGCTATCAGCGCGGCAGCACGCAGTACTGCCGGTATTCTGGTGCAATTCCCCTTCTACGCTGGGATCCAACTGATGATGGAGCATTCCGGTCTGGGCGGACTCATTACCGAATTCTTCATCAATGTTGCGAACAAAGACACCTTCCCGGTAATGACCTTTTTTAGTTCTGCACTGATTAACTTCGCCGTTCCGTCTGGCGGCGGTCACTGGGTTATTCAGGGACCTTTCGTGATACCCGCAGCCCAGGCGCTGGGCGCTGATCTCGGTAAATCGGTAATGGCGATCGCCTACGGCGAGCAATGGATGAACATGGCACAACCATTCTGGGCGCTGCCAGCACTGGCAATCGCCGGACTCGGTGTCCGCGACATCATGGGCTACTGCATCACTGCCCTGCTCTTCTCCGGTGTCATTTTCGTCATTGGTTTAACGCTGTTCTGA", - "dna_sequence_length": 1323, - "functions": [ - "short chain fatty acid transporter" - ], - "id": "CDS_2207", - "location": [ - [ - "NC_000913", - 2324756, - "+", - 1323 - ] - ], - "md5": "282a36dc6c879ca9c0cd544f3128aa14", - "parent_gene": "", - "protein_md5": "01846cf6b1c4d6c0fcc60600392ffdd4", - "protein_translation": "MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPISMVKMWGDGFWNLLAFGMQMALIIVTGHALASSAPVKSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPLLAATPGNPVEHIAGLIPVGDTLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDPKLLMEEADFQKQLPKDAPPSERLEESRILTLIIGALGIAYLAMYFSEHGFNITINTVNLMFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFINVANKDTFPVMTFFSSALINFAVPSGGGHWVIQGPFVIPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMGYCITALLFSGVIFVIGLTLF", - "protein_translation_length": 440, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2218" - ], - [ - "gene_synonym", - "ECK2217" - ], - [ - "gene_synonym", - "GI:16130161" - ], - [ - "gene_synonym", - "GeneID:946727" - ], - [ - "gene_synonym", - "EcoGene:EG11672" - ], - [ - "gene_synonym", - "atoB" - ], - [ - "gene_synonym", - "b2224" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76461" - ], - [ - "gene_synonym", - "ASAP:ABE-0007355" - ], - [ - "gene_synonym", - "NP_416728.1" - ] - ], - "dna_sequence": "ATGAAAAATTGTGTCATCGTCAGTGCGGTACGTACTGCTATCGGTAGTTTTAACGGTTCACTCGCTTCCACCAGCGCCATCGACCTGGGGGCGACAGTAATTAAAGCCGCCATTGAACGTGCAAAAATCGATTCACAACACGTTGATGAAGTGATTATGGGTAACGTGTTACAAGCCGGGCTGGGGCAAAATCCGGCGCGTCAGGCACTGTTAAAAAGCGGGCTGGCAGAAACGGTGTGCGGATTCACGGTCAATAAAGTATGTGGTTCGGGTCTTAAAAGTGTGGCGCTTGCCGCCCAGGCCATTCAGGCAGGTCAGGCGCAGAGCATTGTGGCGGGGGGTATGGAAAATATGAGTTTAGCCCCCTACTTACTCGATGCAAAAGCACGCTCTGGTTATCGTCTTGGAGACGGACAGGTTTATGACGTAATCCTGCGCGATGGCCTGATGTGCGCCACCCATGGTTATCATATGGGGATTACCGCCGAAAACGTGGCTAAAGAGTACGGAATTACCCGTGAAATGCAGGATGAACTGGCGCTACATTCACAGCGTAAAGCGGCAGCCGCAATTGAGTCCGGTGCTTTTACAGCCGAAATCGTCCCGGTAAATGTTGTCACTCGAAAGAAAACCTTCGTCTTCAGTCAAGACGAATTCCCGAAAGCGAATTCAACGGCTGAAGCGTTAGGTGCATTGCGCCCGGCCTTCGATAAAGCAGGAACAGTCACCGCTGGGAACGCGTCTGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCCGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCATTTGCTGCACAGTTCCTTGCCGTTGGGAAAAACCTGGGCTTTGATTCTGAGAAAGTGAATGTCAACGGCGGGGCCATCGCGCTCGGGCATCCTATCGGTGCCAGTGGTGCTCGTATTCTGGTCACACTATTACATGCCATGCAGGCACGCGATAAAACGCTGGGGCTGGCAACACTGTGCATTGGCGGCGGTCAGGGAATTGCGATGGTGATTGAACGGTTGAATTAA", - "dna_sequence_length": 1185, - "functions": [ - "acetyl-CoA acetyltransferase" - ], - "id": "CDS_2208", - "location": [ - [ - "NC_000913", - 2326109, - "+", - 1185 - ] - ], - "md5": "10c4e7a17ac95e8007a92d3e5a04bece", - "parent_gene": "", - "protein_md5": "d467ffd301c62043001b9b93b7fa61f8", - "protein_translation": "MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKANSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN", - "protein_translation_length": 394, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2219" - ], - [ - "gene_synonym", - "GeneID:946728" - ], - [ - "gene_synonym", - "GI:16130162" - ], - [ - "gene_synonym", - "yfaP" - ], - [ - "gene_synonym", - "ECK2218" - ], - [ - "gene_synonym", - "NP_416729.1" - ], - [ - "gene_synonym", - "b2225" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76462" - ], - [ - "gene_synonym", - "EcoGene:EG14078" - ], - [ - "gene_synonym", - "ASAP:ABE-0007357" - ] - ], - "dna_sequence": "ATGCGAAAGATTTTTCTTCCGTTGTTACTGGTGGCGCTTTCGCCTGTCGCTCACAGTGAAGGTGTGCAGGAAGTCGAGATTGATGCACCGCTCTCAGGCTGGCATCCGGCAGAGGGCGAAGATGCCAGTTTTTCACAATCGATCAATTACCCGGCGTCGTCCGTCAACATGGCAGATGATCAAAATATCTCAGCGCAGATCCGCGGCAAAATAAAGAATTATGCTGCGGCGGGTAAAGTTCAGCAGGGCCGGCTGGTGGTCAACGGTGCCAGTATGCCGCAGAGAATTGAATCCGATGGTTCATTTGCACGCCCTTATATTTTCACTGAAGGCAGCAACAGCGTGCAGGTCATCAGCCCGGATGGGCAAAGCCGACAAAAAATGCAGTTTTACTCAACGCCGGGTACAGGAACGATTCGTGCACGTTTACGGCTGGTTCTCTCGTGGGATACGGACAATACCGACCTCGACCTTCACGTTGTTACGCCCGATGGCGAACACGCCTGGTACGGTAACACCGTGCTGAAAAACAGTGGTGCACTGGATATGGATGTCACGACGGGGTACGGACCCGAGATTTTCGCCATGCCCGCGCCAATTCACGGGCGCTATCAGGTGTATATCAACTACTATGGTGGGCGCAGCGAAACGGAATTAACCACCGCCCAACTGACGCTGATCACCGATGAAGGATCGGTCAATGAGAAACAGGAAACATTTATTGTACCGATGCGTAATGCTGGCGAGCTGACGCTGGTGAAAAGTTTTGACTGGTGA", - "dna_sequence_length": 777, - "functions": [ - "DUF2135 family protein, putative host defense protein" - ], - "id": "CDS_2209", - "location": [ - [ - "NC_000913", - 2328143, - "-", - 777 - ] - ], - "md5": "fc8eb515b77990d9e4b83f85cbec27e7", - "parent_gene": "", - "protein_md5": "8052f4b1a1591eb979f9030fc61c1eff", - "protein_translation": "MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW", - "protein_translation_length": 258, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130163" - ], - [ - "gene_synonym", - "yfaQ" - ], - [ - "gene_synonym", - "NP_416730.1" - ], - [ - "gene_synonym", - "ECK2219" - ], - [ - "gene_synonym", - "JW2220" - ], - [ - "gene_synonym", - "ASAP:ABE-0007359" - ], - [ - "gene_synonym", - "GeneID:946730" - ], - [ - "gene_synonym", - "b2226" - ], - [ - "gene_synonym", - "EcoGene:EG14079" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76463" - ] - ], - "dna_sequence": "GTGAACTGGCGCAGAATCGTCTGGCTATTGGCGTTGGTTACTCTGCCAACACTTGCGGAGGAGACGCCGTTACAACTGGTGCTGCGCGGTGCGCAGCACGATCAACTGTATCAGCTGTCGTCATCAGGCGTGACCAAAGTCTCAGCATTACCTGACTCGCTCACCACGCCGTTAGGGAGTTTGTGGAAACTGTATGTTTACGCCTGGCTGGAGGATACCCATCAACCGGAGCAGCCCTACCAGTGTCGCGGAAACTCCCCGGAAGAGGTTTATTGTTGTCAGGCTGGGGAGAGCATAACGCGCGATACCGCGCTGGTACGTTCCTGTGGGCTCTATTTTGCGCCGCAGCGGTTGCATATTGGCGCAGATGTGTGGGGGCAATACTGGCAACAGCGTCAGGCACCTGCGTGGTTAGCGTCTCTGACTACGCTGAAGCCAGAAACCTCGGTAACGGTTAAATCGCTGCTTGATTCATTAGCGACGTTACCCGCGCAAAACAAAGCTCAGGAAGTCTTACTGGATGTGGTGCTGGACGAGGCGAAAATCGGTGTCGCATCCATGCTCGGTAGTCGGGTACGGGTGAAAACCTGGAGCTGGTTTGCCGATGATAAACAGGAAATCCGTCAGGGTGGTTTTGCTGGCTGGTTAACCGATGGTACACCGCTGTGGGTTACTGGCAGTGGCACCAGCAAAACGGTACTAACCCGTTATGCGACGGTGCTTAATCGGGTTTTGCCAGTGCCGACGCAGGTTGCCAGTGGGCAATGTGTAGAGGTGGAGCTGTTTGCCCGCTATCCGCTGAAGAAAATCACAGCGGAAAAGAGTACGACGGCAGTAAATCCCGGCGTACTTAATGGGCGCTATCGTGTGACGTTTACTAATGGTAACCACATTACGTTTGTCAGCCACGGTGAGACGACCTTACTGAGCGAAAAGGGCAAACTGAAATTGCAGTCGCATCTCGATCGTGAAGAGTACGTTGCCAGAGTTCTGGATCGCGAGGCGAAAAGTACGCCCCCTGAGGCAGCGAAAGCCATGACCGTGGCGATTCGCACTTTTTTACAGCAAAACGCCAATCGGGAAGGCGATTGCCTGACCATCCCCGACAGCAGCGCCACGCAGCGTGTTTCTGCTTCGCCAGCGACCACGGGGGCGCGAACGATGACCGCCTGGACGCAGGATCTCATCTATGCAGGCGATCCGGTTCATTATCATGGCAGTCGCGCTACCGAAGGGACACTTTCCTGGCGGCAAGCCACGGCCCAGGCGGGGCAGGGAGAGCGTTACGATCAGATACTCGCGTTTGCTTATCCCGACAACAGTCTTAGCCGCTGGGGAGCGCCACGCTCAACCTGCCAGTTATTACCCAAAGCGAAAGCCTGGCTGGCGAAAAAAATGCCGCAGTGGCGGCGTATATTACAAGCTGAGACGGGGTACAACGAACCAGACGTGTTTGCGGTTTGCCGTTTAGTCTCAGGTTTCCCCTATACCGATCGGCAGCAGAAACGGCTGTTTATTCGTAACTTCTTTACGCTTCAGGATCGGCTGGATTTAACCCATGAGTATCTGCACCTGGCCTTTGATGGTTATCCCACCGGGCTTGATGAGAACTATATCGAAACGCTGACCCGACAATTATTAATGGACTAA", 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"gene_synonym", - "GeneID:1450231" - ], - [ - "gene_synonym", - "yfaR" - ], - [ - "gene_synonym", - "yfaS" - ], - [ - "gene_synonym", - "ECK2220" - ], - [ - "gene_synonym", - "JW2221" - ], - [ - "gene_synonym", - "JW2222" - ], - [ - "gene_synonym", - "ASAP:ABE-0007362" - ], - [ - "gene_synonym", - "ASAP:ABE-0007364" - ], - [ - "gene_synonym", - "ASAP:ABE-0285101" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76464" - ], - [ - "gene_synonym", - "EcoGene:EG14081" - ], - [ - "gene_synonym", - "b4500" - ] - ], - "dna_sequence": "ATGGATACCCAACGATTCCAATCCCAATTTCATTGGCATTTATCGTTTAAATTTTCTGGCGCGATAGCAGCGTGCTTGTCCCTGTCTCTTGTGGGAACAGGGCTTGCTAATGCTGATGATTCGCTTCCTTCCAGCAACTATGCGCCGCCTGCCGGGGGAACATTCTTTTTGCTTGCTGACAGCAGTTTTAGCAGCAGTGAAGAGGCGAAAGTGCGACTGGAAGCGCCGGGGCGTGATTATCGGCGCTATCAGATGGAAGAGTACGGCGGCGTGGACGTTCGCCTGTATCGTATTCCTGACCCGATGGCATTTTTGCGCCAGCAGAAAAACCTGCATCGCATTGTGGTGCAACCGCAATATCTGGGCGACGGGCTGAACAATACGCTAACCTGGCTGTGGGATAACTGGTACGGCAAATCTCGCCGCGTGATGCAGCGTACTTTCTCTTCTCAGTCACGGCAGAATGTGACTCAGGCGTTACCCGAATTACAGCTCGGCAATGCCATTATTAAACCTTCCCGTTATGTACAGAACAACCAGTTTTCCCCGCTGAAAAAATATCCCCTGGTGAAACAGTTCCGTTATCCACTATGGCAGGCTAAACCGTTCGAGCCGCAGCAAGGGGTAAAACTGGAAGGCGCATCCAGCAATTTCATCTCGCCGCAGCCGGGTAACATTTATATTCCTCTCGGCCAACAAGAGCCGGGACTGTACCTCGTCGAGGCGATGGTTGGTGGGTATCGGGCGACGACGGTGGTGTTTGTTTCCGATACCGTGGCGCTTAGCAAAGTGTCAGGCAAAGAGCTTCTGGTGTGGACCGCGGGTAAAAAACAGGGTGAAGCGAAGCCCGGCTCAGAGATCTTGTGGACTGACGGTCTTGGCGTGATGACCCGCGGTGTGACCGATGACAGCGGTACCTTGCAGTTACAACATATATCGCCAGAACGTTCATACATTCTGGGTAAGGATGCTGAAGGCGGCGTTTTTGTCTCCGAGAACTTCTTCTACGAAAGCGAAATCTACAACACCCGCTTGTATATTTTTACCGATCGCCCGCTATATCGCGCAGGCGATCGTGTCGATGTTAAAGTGATCGGCCGCGAGTTCCACGATCCGTTGCATTCATCCCCCATCGTCAGCGCCCCGGCGAAGCTTTCGGTGCTGGACGCCAACGGCAGTCTGTTGCAAACCGTCAATGTCACGCTGGATGCGCGCAATGGCGGGCAGGGAAGTTTCCGCCTGCCAGAAAATGCCGTAGCCGGAGGTTATGAGTTACGTCTTGCTTACCGCAATCAGGTCTATAGCAGCAGTTTTCGCGTGGCAAACTACATCAAGCCACATTTCGAGATTGGTTTAGCTCTCGCCAAAAAAGAGTTCAAAACTGGCGAAGCGGTCAGCGGCAAACTGCAACTGCTCTACCCGGATGGCGAGCCGGTAAAAAATGCCCGCGTGCAGTTAAGTTTGCGCGCTCAGCAATTATCAATGGTCGGTAACGATTTGCGTTATGCCGGACGTTTCCCCGTGTCGCTGGAAGGCAGCGAAACGGTGTCCGACGCCAGCGGTCATGTGGCGTTAAATCTCCCCGCCGCCGATAAACCGAGCCGCTATTTGTTAACCGTCTCCGCCAGTGACGGCGCGGCGTATCGCGTCACCACCACCAAAGAGATCCTCATTGAACGCGGTCTGGCGCATTACTCATTAAGTACTGCCGCACAATACAGTAATAGCGGCGAGTCGGTTGTGTTCCGTTATGCCGCGCTGGAATCTTCAAAACAGGTTCCTGTTACGTATGAATGGTTGCGTCTCGAAGACCGCACGAGCCATAGCGGAGAGCTACCGTCAGGCGGCAAATCCTTTACCGTCAATTTCGCTAAACCTGGCAACTACAATCTGACATTACGCGATAAAGACGGCTTAATTCTCGCTGGGTTAAGTCATGCCGTCAGCGGTAAGGGCAGCACGGCGCATACTGGTACGGTAGATATCGTGGCGGATAAAACGCTGTACCAGCCAGGCGAAACCGCGAAGATGCTGATTACCTTTCCGGAGCCAATTGATGAAGCATTATTGACGCTGGAACGCGATCGCGTGGAACAGCAGTCGCTGCTTTCGCATCCGGCAAACTGGCTAACGCTACAACGTTTAAACGATACCCAGTATGAAGCCCGGGTTCCAGTGAGCAATTCCTTTGCGCCTAACATCACTTTTTCGGTGCTGTATACCCGTAACGGTCAGTACAGTTTTCAGAACGCCGGGATCAAAGTTGCCGTTCCCCAGCTGGATATCCGGGTGAAAACGGACAAAACCCATTACCAGCCTGGTGAACTGGTCAATGTCGAATTAACCTCGTCGCTGAAAGGTAAACCTGTTTCTGCGCAGCTAACGGTAGGCGTGGTCGATGAAATGATCTACGCGCTGCAACCAGAAATCGCGCCGAATATCGGCAAATTTTTCTATCCGCTGGGGCGTAACAATGTGCGTACCAGCTCCAGTCTGTCGTTTATCAGCTACGACCAGGCGCTCTCCAGCGAGCCGGTTGCGCCTGGCGCAACTAACCGCAGCGAGCGGCGAGTAAAAATGCTTGAACGTCCACGGCGTGAAGAGGTGGATACCGCGGCATGGATGCCGTCACTCACAACCGATAAACAAGGCAAAGCGTATTTCACGTTCCTGATGCCTGATTCGTTAACCCGCTGGCGTATCACCGCGCGTGGGATGAACGGCGACGGGCTGGTCGGGCAGGGGCGTGCTTATCTGCGTTCGGAAAAAAATCTCTACATGAAGTGGAGTATGCCAACGGTGTATCGCGTGGGCGACAAACCGGCGGCAGGACTGTTTATCTTCAGTCAGCAGGATAACGAACCGGTGGCGCTGGTGACTAAATTTGCAGGCGCTGAGATGCGCCAGACGCTGACGCTGCACAAAGGGGCGAATTATATTTCGCTGACGCAGAATATTCAGCAATCTGGCTTGTTAAGTGCAGAACTGCAACAAAATGGGCAAGTGCAGGACAGCATTAGCACAAAACTGTCTTTTGTGGATAACAGCTGGCCCGTTGAACAGCAGAAAAATGTCATGCTCGGTGGTGGCGATAACGCGCTGATGTTGCCCGAGCAGGCGAGCAATATCCGGCTACAAAGTAGTGAAACGCCGCAGGAGATTTTCCGCAACAATCTTGATGCGTTAGTCGATGAACCGTGGGGTGGCGTAATCAACACCGGTAGCCGTCTGATCCCGCTCAGTCTCGCCTGGCGTTCGCTTGCCGATCATCAAAGTGCCGCCGCTAACGACATTCGTCAGATGATTCAGGATAACCGTCTGCGGCTGATGCAACTGGCGGGGCCCGGAGCGCGCTTTACCTGGTGGGGTGAAGATGGCAATGGTGACGCCTTCCTTACGGCATGGGCATGGTACGCCGACTGGCAGGCCAGCCAGGCGATCGGCGTAACGCAACAACCGGAATACTGGCAGCATATGCTCGACAGCTACGCGGAGCAGGCAGATAACATGCCGTTATTGCATCGGGCGCTGGTGCTGGCATGGGCGCAGGAGATGAATTTGCCGTGCAAAACGTTGTTGAAAGGGTTGGATGAAGCTATCGCCCGGCGCGGAACTAAAACTGAAGATTTCTCTGAGGAAGACACCCGCGATATCAATGATAGCCTGATCCTCGATACACCGGAGTCTCCACTGGCAGATGCGGTGGCAAACGTCTTAACCATGACGTTGCTGAAAAAAGCGCAGTTGAAGTCCACGGTGATGCCACAGGTTCAGCAATATGCGTGGGATAAAGCGGCAAACAGCAATCAGCCGCTGGCGCACACGGTTGTGCTGCTTAATAGCGGTGGCGACGCTACCCAGACGGCCGCTATTTTAAGTGGTTTGACCGCTGAGCAATCCACTATTGAGCGCGCGCTGGCCATGAACTGGCTGGCGAAATATATGGCGACAATGCCTCCAGTTGTTTTGCCTGCGCCTGCGGGCGCATGGGCTAAACATAAGTTAACTGGAGGGGGCGAAGACTGGCGTTGGGTTGGTCAGGGCGTGCCGGACATTCTCTCTTTTGGTGACGAATTATCGCCGCAAAATGTGCAGGTCCGCTGACGTGAGCCGGCAAAAATGGCTCAACAAAGTAACATTCCGGTGACCGTTGAACGCCAGTTGTATCGGCTTATCCCTGGTGAAGAAGAGATGAGCTTTATTCTGCAACCGGTGACCAGCAATGAGATTGACAGCGATGCGCTGTATCTCGATGAAATCACGCTTACCAGCGAGCAGGATGCAGTTCTGCGCTACGGTCAGGTGGAAGTACCGCTGCCACCGGGAGCCGACGTTGAGCGCACAACATGGGGCATTTCGGTCAATAAACCCAACGCCGCGAAACAGCAGGGGCAATTGCTGGAAAAAGCGCGAAATGAAATGGGCGAACTGGCCTATATGGTGCCGGTGAAAGAACTGACGGGAACGGTCACTTTCCGCCATTTGCTGCGCTTCTCGCAAAAAGGGCAATTCGTTCTGCCTCCTGCTCGTTATGTGCGTTCCTATGCACCTGCGCAGCAAAGTGTTGCGGCAGGGAGTGAATGGACCGGGATGCAGGTGAAATAA", 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"MDTQRFQSQFHWHLSFKFSGAIAACLSLSLVGTGLANADDSLPSSNYAPPAGGTFFLLADSSFSSSEEAKVRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVKQFRYPLWQAKPFEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGKELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVIGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALAKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQAIGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVR", - "protein_translation_length": 1367, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfaT" - ], - [ - "gene_synonym", - "ECK2221" - ], - [ - "gene_synonym", - "GeneID:946622" - ], - [ - "gene_synonym", - "JW2223" - ], - [ - "gene_synonym", - "GI:90111404" - ], - [ - "gene_synonym", - "b2229" - ], - [ - "gene_synonym", - "ASAP:ABE-0007366" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76466" - ], - [ - "gene_synonym", - "EcoGene:EG14082" - ], - [ - "gene_synonym", - "NP_416732.4" - ] - ], - "dna_sequence": "ATGAGGCACGGGCTGCTGGCGCTGATTTGCTGGCTGTGTTGTGTTGTTGCCCATAGCGAAATGCTGAATGTCGAACAATCCGGGCTGTTTCGCGCCTGGTTTGTACGCATTGCACAAGAACAGCTCCGCCAGGGGCCAAGTCCACGCTGGTATCAGCAGGATTGTGCGGGCCTGGTGCGATTTGCGGCGAACGAGACGCTGAAAGTTCACGACAGTAAATGGCTAAAAAGTAACGGTTTATCTAGCCAGTATTTGCCGCCAGAGATGACGCTAACACCTGAACAGCGTCAACTGGCGCAAAACTGGAATCAGGGGAACGGGAAAACCGGCCCCTATGTGACCGCGATTAATTTGATTCAGTACAACAGCCAGTTTATTGGCCAGGACATAAACCAGGCGCTGCCTGGCGATATGATTTTTTTCGATCAGGGCGATGCCCAGCACTTAATGGTCTGGATGGGGCGTTACGTCATCTACCACACCGGAAGCGCCACGAAAACTGACAACGGAATGCGCGCAGTCAGTCTGCAACAACTTATGACATGGAAGGACACCCGATGGATACCCAACGATTCCAATCCCAATTTCATTGGCATTTATCGTTTAAATTTTCTGGCGCGATAG", - "dna_sequence_length": 624, - "functions": [ - "DUF1175 family protein, putative host defense protein" - ], - "id": "CDS_2212", - "location": [ - [ - "NC_000913", - 2334959, - "-", - 624 - ] - ], - "md5": "60e9d8da47e7f057a6d1c7bf359f53e4", - "parent_gene": "", - "protein_md5": "241a0895d7c02ebc1fc4df3418db684b", - "protein_translation": "MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR", - "protein_translation_length": 207, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416733.4" - ], - [ - "gene_synonym", - "GeneID:946618" - ], - [ - "gene_synonym", - "pufY" - ], - [ - "gene_synonym", - "ECK2222" - ], - [ - "gene_synonym", - "JW2224" - ], - [ - "gene_synonym", - "GI:90111405" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17994" - ], - [ - "gene_synonym", - "EcoGene:EG11142" - ], - [ - "gene_synonym", - "yfaA" - ], - [ - "gene_synonym", - "ASAP:ABE-0007368" - ], - [ - "gene_synonym", - "b2230" - ] - ], - "dna_sequence": "ATGAGTGGTGAAAAAAAGGCGAAAGGCTGGCGGTTCTATGGTCTTGTAGGTTTTGGCGCAATAGCACTGCTTTCCGCTGGCGTCTGGGCGTTGCAATATGCTGGCAGTGGGCCAGAAAAAACGTTGTCGCCGCTGGTGGTGCACAACAATCTGCAAATCGATCTCAATGAGCCGGACCTCTTTCTCGACAGCGACTCTCTGAGCCAGCTTCCCAAAGATCTCCTCACCATTCCGTTTCTCCACGATGTTCTGAGCGAAGATTTCGTTTTCTATTATCAGAATCATGCCGATCGTCTGGGCATTGAAGGCAGCATTCGTCGTATTGTCTATGAACACGATCTCACGCTGAAAGATAAGCTCTTTTCGTCACTCTTAGATCAGCCCGCGCAGGCAGCGCTGTGGCACGATAAACAAGGCCATCTTTCACATTATATGGTGCTGATCCAGCGCAGTGGTTTAAGCAAACTGCTGGAGCCATTGTTGTTTGCCGCTACCAGCGACAGCCAGTTAAGCAAAACGGAAATCAGTAGCATCAAGATAAATAGTGAAACTGTTCCTGTTTATCAGTTGCGCTATAACGGCAATAACGCCCTGATGTTCGCGACTTATCAGGACAAGATGCTGGTGTTTTCCAGCACGGATATGTTGTTTAAAGATGATCAGCAGGATACCGAAGCCACGGCGATCGCAGGTGATTTGTTGAGCGGCAAAAAACGCTGGCAAGCAAGCTTTGGCCTGGAAGAGCGTACTGCCGAAAAAACGCCAGTACGCCAGCGCATCGTAGTCAGCGCCAGGTGGCTGGGGTTTGGCTACCAGCGGTTAATGCCTTCTTTTGCTGGCGTACGCTTCGAAATGGGTAACGACGGCTGGCACAGTTTTGTGGCGTTAAATGATGAATCCGCCAGCGTAGATGCCAGTTTCGATTTTACGCCGGTATGGAACAGTATGCCTGCCGGAGCCAGCTTCTGTGTGGCGGTGCCGTATTCACACGGTATTGCCGAAGAGATGCTTTCGCACATCAGCCAGGAAAACGACAAGCTGAATGGGGCGTTAGACGGTGCCGCGGGGCTGTGCTGGTATGAAGACTCAAAATTGCAAACCCCGCTGTTTGTCGGTCAGTTTGATGGCACTGCCGAACAGGCGCAATTGCCAGGGAAACTGTTTACGCAAAATATTGGTGCGCACGAAAGCAAAGCGCCAGAAGGTGTTTTGCCGGTAAGCCAGACTCAGCAGGGCGAAGCGCAAATCTGGCGTCGCGAAGTGAGTTCCCGATACGGCCAGTATCCGAAAGCGCAGGCGGCGCAACCCGATCAATTAATGTCGGATTATTTTTTCCGTGTGTCGCTGGCGATGCAAAACAAAACGCTGCTTTTCTCCCTCGATGACACGCTGGTTAATAACGCGCTGCAAACACTGAATAAAACCCGCCCGGCAATGGTGGATGTAATACCCACTGATGGCATCGTTCCGCTCTATATCAATCCACAAGGAATAGCGAAACTGCTGCGTAACGAAACGTTGACCAGTCTGCCGAAGAATCTCGAACCGGTTTTTTATAACGCCGCACAAACTTTATTAATGCCGAAGCTGGACGCTTTATCTCAACAACCGCGTTATGTCATGAAGCTGGCCCAGATGGAACCCGGTGCCGCCTGGCAGTGGCTACCCATAACCTGGCAGCCGCTATGA", - "dna_sequence_length": 1689, - "functions": [ - "DUF2138 family protein, putative host defense protein" - ], - "id": "CDS_2213", - "location": [ - [ - "NC_000913", - 2336644, - "-", - 1689 - ] - ], - "md5": "edea138ab985ed1ca305a36900a198df", - "parent_gene": "", - "protein_md5": "7b92f248e81971ecfd209d3cac25be51", - "protein_translation": "MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERTAEKTPVRQRIVVSARWLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGIAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL", - "protein_translation_length": 562, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130166" - ], - [ - "gene_synonym", - "nalA" - ], - [ - "gene_synonym", - "parD" - ], - [ - "gene_synonym", - "EcoGene:EG10423" - ], - [ - "gene_synonym", - "gyrA" - ], - [ - "gene_synonym", - "JW2225" - ], - [ - "gene_synonym", - "ECK2223" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AES4" - ], - [ - "gene_synonym", - "GeneID:946614" - ], - [ - "gene_synonym", - "nfxA" - ], - [ - "gene_synonym", - "norA" - ], - [ - "gene_synonym", - "hisW" - ], - [ - "gene_synonym", - "NP_416734.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007370" - ], - [ - "gene_synonym", - "b2231" - ] - ], - "dna_sequence": "ATGAGCGACCTTGCGAGAGAAATTACACCGGTCAACATTGAGGAAGAGCTGAAGAGCTCCTATCTGGATTATGCGATGTCGGTCATTGTTGGCCGTGCGCTGCCAGATGTCCGAGATGGCCTGAAGCCGGTACACCGTCGCGTACTTTACGCCATGAACGTACTAGGCAATGACTGGAACAAAGCCTATAAAAAATCTGCCCGTGTCGTTGGTGACGTAATCGGTAAATACCATCCCCATGGTGACTCGGCGGTCTATGACACGATCGTCCGCATGGCGCAGCCATTCTCGCTGCGTTATATGCTGGTAGACGGTCAGGGTAACTTCGGTTCTATCGACGGCGACTCTGCGGCGGCAATGCGTTATACGGAAATCCGTCTGGCGAAAATTGCCCATGAACTGATGGCCGATCTCGAAAAAGAGACGGTCGATTTCGTTGATAACTATGACGGCACGGAAAAAATTCCGGACGTCATGCCAACCAAAATTCCTAACCTGCTGGTGAACGGTTCTTCCGGTATCGCCGTAGGTATGGCAACCAACATCCCGCCGCACAACCTGACGGAAGTCATCAACGGTTGTCTGGCGTATATTGATGATGAAGACATCAGCATTGAAGGGCTGATGGAACACATCCCGGGGCCGGACTTCCCGACGGCGGCAATCATTAACGGTCGTCGCGGTATTGAAGAAGCTTACCGTACCGGTCGCGGCAAGGTGTATATCCGCGCTCGCGCAGAAGTGGAAGTTGACGCCAAAACCGGTCGTGAAACCATTATCGTCCACGAAATTCCGTATCAGGTAAACAAAGCGCGCCTGATCGAGAAGATTGCGGAACTGGTAAAAGAAAAACGCGTGGAAGGCATCAGCGCGCTGCGTGACGAGTCTGACAAAGACGGTATGCGCATCGTGATTGAAGTGAAACGCGATGCGGTCGGTGAAGTTGTGCTCAACAACCTCTACTCCCAGACCCAGTTGCAGGTTTCTTTCGGTATCAACATGGTGGCATTGCACCATGGTCAGCCGAAGATCATGAACCTGAAAGACATCATCGCGGCGTTTGTTCGTCACCGCCGTGAAGTGGTGACCCGTCGTACTATTTTCGAACTGCGTAAAGCTCGCGATCGTGCTCATATCCTTGAAGCATTAGCCGTGGCGCTGGCGAACATCGACCCGATCATCGAACTGATCCGTCATGCGCCGACGCCTGCAGAAGCGAAAACTGCGCTGGTTGCTAATCCGTGGCAGCTGGGCAACGTTGCCGCGATGCTCGAACGTGCTGGCGACGATGCTGCGCGTCCGGAATGGCTGGAGCCAGAGTTCGGCGTGCGTGATGGTCTGTACTACCTGACCGAACAGCAAGCTCAGGCGATTCTGGATCTGCGTTTGCAGAAACTGACCGGTCTTGAGCACGAAAAACTGCTCGACGAATACAAAGAGCTGCTGGATCAGATCGCGGAACTGTTGCGTATTCTTGGTAGCGCCGATCGTCTGATGGAAGTGATCCGTGAAGAGCTGGAGCTGGTTCGTGAACAGTTCGGTGACAAACGTCGTACTGAAATCACCGCCAACAGCGCAGACATCAACCTGGAAGATCTGATCACCCAGGAAGATGTGGTCGTGACGCTCTCTCACCAGGGCTACGTTAAGTATCAGCCGCTTTCTGAATACGAAGCGCAGCGTCGTGGCGGGAAAGGTAAATCTGCCGCACGTATTAAAGAAGAAGACTTTATCGACCGACTGCTGGTGGCGAACACTCACGACCATATTCTGTGCTTCTCCAGCCGTGGTCGCGTCTATTCGATGAAAGTTTATCAGTTGCCGGAAGCCACTCGTGGCGCGCGCGGTCGTCCGATCGTCAACCTGCTGCCGCTGGAGCAGGACGAACGTATCACTGCGATCCTGCCAGTGACCGAGTTTGAAGAAGGCGTGAAAGTCTTCATGGCGACCGCTAACGGTACCGTGAAGAAAACTGTCCTCACCGAGTTCAACCGTCTGCGTACCGCCGGTAAAGTGGCGATCAAACTGGTTGACGGCGATGAGCTGATCGGCGTTGACCTGACCAGCGGCGAAGACGAAGTAATGCTGTTCTCCGCTGAAGGTAAAGTGGTGCGCTTTAAAGAGTCTTCTGTCCGTGCGATGGGCTGCAACACCACCGGTGTTCGCGGTATTCGCTTAGGTGAAGGCGATAAAGTCGTCTCTCTGATCGTGCCTCGTGGCGATGGCGCAATCCTCACCGCAACGCAAAACGGTTACGGTAAACGTACCGCAGTGGCGGAATACCCAACCAAGTCGCGTGCGACGAAAGGGGTTATCTCCATCAAGGTTACCGAACGTAACGGTTTAGTTGTTGGCGCGGTACAGGTAGATGACTGCGACCAGATCATGATGATCACCGATGCCGGTACGCTGGTACGTACTCGCGTTTCGGAAATCAGCATCGTGGGCCGTAACACCCAGGGCGTGATCCTCATCCGTACTGCGGAAGATGAAAACGTAGTGGGTCTGCAACGTGTTGCTGAACCGGTTGACGAGGAAGATCTGGATACCATCGACGGCAGTGCCGCGGAAGGGGACGATGAAATCGCTCCGGAAGTGGACGTTGACGACGAGCCAGAAGAAGAATAA", - "dna_sequence_length": 2628, - "functions": [ - "DNA gyrase (type II topoisomerase), subunit A" - ], - "id": "CDS_2214", - "location": [ - [ - "NC_000913", - 2339420, - "-", - 2628 - ] - ], - "md5": "89a36206d95674e4513b94cdc67bc527", - "parent_gene": "", - "protein_md5": "76463a0cc647d9eaf9e912ca32648522", - "protein_translation": "MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE", - "protein_translation_length": 875, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130167" - ], - [ - "gene_synonym", - "GeneID:946607" - ], - [ - "gene_synonym", - "pufX" - ], - [ - "gene_synonym", - "JW2226" - ], - [ - "gene_synonym", - "ECK2224" - ], - [ - "gene_synonym", - "NP_416735.1" - ], - [ - "gene_synonym", - "yfaB" - ], - [ - "gene_synonym", - "EcoGene:EG11143" - ], - [ - "gene_synonym", - "ASAP:ABE-0007374" - ], - [ - "gene_synonym", - "ubiG" - ], - [ - "gene_synonym", - "b2232" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17993" - ] - ], - "dna_sequence": "ATGAATGCCGAAAAATCGCCGGTAAACCATAACGTAGACCACGAAGAGATCGCTAAATTTGAAGCCGTCGCCTCCCGCTGGTGGGATCTGGAAGGTGAGTTCAAACCGCTGCACCGCATTAACCCGCTGCGTCTGGGCTATATTGCCGAGCGTGCTGGCGGTTTATTTGGCAAAAAGGTGCTCGATGTCGGTTGTGGCGGCGGCATTCTGGCCGAGAGTATGGCGCGCGAAGGCGCGACGGTGACCGGTCTGGATATGGGCTTTGAGCCATTGCAGGTGGCAAAACTGCACGCACTGGAAAGCGGCATTCAGGTGGATTACGTGCAGGAAACCGTGGAAGAGCACGCGGCAAAACATGCCGGGCAGTATGATGTGGTGACCTGCATGGAGATGCTGGAGCACGTCCCCGATCCGCAGTCAGTGGTCAGAGCCTGTGCGCAACTGGTGAAACCAGGCGGCGATGTCTTTTTCTCGACACTTAACCGCAACGGCAAGTCATGGCTGATGGCGGTGGTTGGTGCGGAATATATTTTGCGCATGGTGCCCAAAGGCACGCATGATGTGAAGAAGTTTATTAAACCGGCAGAATTGCTGGGCTGGGTGGATCAGACCAGTTTAAAAGAGCGGCATATCACTGGGCTGCATTACAACCCGATCACTAATACTTTTAAACTCGGCCCCGGCGTGGATGTGAACTATATGCTGCACACGCAGAATAAGTGA", - "dna_sequence_length": 723, - "functions": [ - "bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase" - ], - "id": "CDS_2215", - "location": [ - [ - "NC_000913", - 2339567, - "+", - 723 - ] - ], - "md5": "ed1a243e8d27869395b7eb2c096078b0", - "parent_gene": "", - "protein_md5": "c85df4f0f034c51fe420ff314ef1d243", - "protein_translation": "MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK", - "protein_translation_length": 240, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45508" - ], - [ - "gene_synonym", - "GeneID:946595" - ], - [ - "gene_synonym", - "NP_416736.1" - ], - [ - "gene_synonym", - "EcoGene:EG12850" - ], - [ - "gene_synonym", - "JW2227" - ], - [ - "gene_synonym", - "ECK2225" - ], - [ - "gene_synonym", - "yfaF" - ], - [ - "gene_synonym", - "ASAP:ABE-0007377" - ], - [ - "gene_synonym", - "yfaK" - ], - [ - "gene_synonym", - "yfaL" - ], - [ - "gene_synonym", - "GI:16130168" - ], - [ - "gene_synonym", - "yfaJ" - ], - [ - "gene_synonym", - "b2233" - ] - ], - "dna_sequence": "ATGCGGATTATCTTTCTACGCAAGGAGTATTTATCTTTACTCCCGTCAATGATTGCATCTCTTTTCTCTGCTAACGGTGTCGCGGCGGTCACTGATTCATGCCAGGGATATGATGTCAAAGCGAGTTGTCAGGCCAGCAGGCAAAGCCTTTCAGGCATTACGCAGGACTGGAGTATCGCTGATGGGCAATGGCTGGTTTTTTCGGATATGACCAATAACGCCAGCGGTGGGGCCGTATTTTTGCAACAAGGAGCGGAATTTTCACTATTACCAGAAAATGAAACTGGAATGACTCTGTTTGCCAATAACACCGTTACAGGAGAATATAATAACGGCGGGGCCATATTTGCTAAAGAAAACTCAACGCTGAATCTTACTGATGTTATTTTTTCCGGTAACGTCGCAGGCGGCTATGGTGGCGCAATCTATTCTTCTGGTACTAACGATACTGGTGCCGTCGATTTACGTGTCACTAACGCCATGTTTCGCAATAACATCGCTAATGATGGCAAAGGTGGCGCAATTTATACCATTAATAATGACGTTTATTTAAGTGATGTTATTTTTGATAACAACCAGGCATATACATCAACAAGTTACAGTGATGGCGATGGCGGGGCAATCGATGTTACCGATAATAATAGCGACAGCAAGCATCCTTCAGGTTATACGATAGTAAATAACACTGCCTTTACAAATAACACTGCCGAAGGTTATGGCGGGGCGATATATACCAATAGCGTGACGGCTCCCTATCTTATTGATATTTCTGTTGATGACAGCTACAGCCAGAACGGAGGCGTGTTAGTCGATGAGAACAATAGCGCAGCAGGCTATGGAGATGGTCCTTCCTCTGCGGCGGGTGGCTTTATGTATCTCGGCTTAAGTGAAGTTACCTTTGATATTGCCGACGGAAAAACGCTGGTTATTGGCAATACAGAGAATGACGGAGCTGTTGACTCTATTGCTGGTACCGGGTTAATCACCAAAACAGGTTCCGGCGATCTGGTACTTAATGCAGATAACAATGACTTTACTGGTGAGATGCAGATTGAAAACGGTGAAGTTACCCTGGGCCGCAGCAACTCCCTGATGAATGTCGGCGATACGCATTGCCAGGACGATCCGCAAGACTGCTACGGTCTGACGATAGGGAGTATTGATCAGTATCAGAATCAGGCTGAGCTAAACGTTGGCTCGACCCAACAAACTTTTGTGCACGCATTGACGGGCTTTCAGAATGGCACTTTAAATATCGATGCTGGTGGCAACGTTACTGTTAATCAGGGCAGTTTTGCTGGCATCATCGAAGGTGCTGGTCAGCTCACCATTGCGCAAAACGGCAGCTACGTGCTGGCAGGGGCGCAGTCGATGGCGCTAACCGGCGATATAGTCGTTGATGATGGTGCGGTGCTTTCGCTGGAAGGCGACGCGGCAGATCTTACCGCTCTCCAGGACGATCCGCAGTCGATCGTGTTAAACGGCGGTGTGCTCGATCTCTCTGATTTCTCCACCTGGCAGAGCGGCACATCATACAACGATGGCCTTGAAGTCAGTGGCAGCAGCGGAACGGTTATCGGCAGTCAGGATGTGGTAGATCTTGCAGGTGGCGACAATTTGCATATCGGCGGCGACGGGAAAGATGGCGTCTACGTGGTGGTCGATGCGAGCGACGGGCAGGTAAGTCTGGCAAACAATAATAGTTATTTGGGCACAACACAAATCGCCTCCGGTACGCTGATGGTGAGCGACAACTCGCAGCTTGGAGATACCCACTATAACCGCCAGGTTATCTTTACCGATAAGCAACAAGAAAGCGTGATGGAGATTACCTCCGACGTTGACACGCGTTCAGATGCGGCAGGCCACGGACGTGATATTGAAATGCGCGCCGACGGTGAAGTGGCAGTTGATGCGGGGGTAGACACGCAGTGGGGCGCACTGATGGCTGACAGCAGCGGGCAGCATCAGGATGAGGGTAGCACATTGACTAAAACGGGGGCTGGTACACTGGAGCTGACCGCCAGCGGTACAACGCAGTCGGCGGTACGTGTCGAAGAAGGCACCCTGAAAGGTGATGTTGCTGATATCCTTCCTTATGCTTCGTCACTGTGGGTTGGTGATGGGGCAACGTTCGTTACTGGCGCGGATCAGGATATTCAGTCAATTGATGCTATTTCCAGCGGCACTATCGACATCAGCGATGGTACGGTTTTGCGCCTGACCGGGCAGGATACTTCCGTCGCCCTTAATGCCTCACTATTTAACGGCGATGGGACGCTGGTGAATGCCACCGATGGTGTGACGTTGACAGGTGAGCTTAATACCAACCTTGAAACTGACAGCCTGACTTATCTTTCCAACGTGACGGTTAATGGCAATCTGACCAATACGTCCGGTGCGGTTAGCCTGCAAAATGGCGTCGCTGGCGATACGCTGACGGTAAACGGTGATTATACCGGCGGCGGTACGCTACTGCTCGATAGCGAATTAAACGGCGATGACTCGGTAAGCGATCAATTGGTGATGAACGGTAATACTGCTGGCAACACAACTGTGGTGGTTAACTCCATTACAGGGATTGGTGAGCCGACATCGACAGGCATTAAAGTGGTTGATTTCGCAGCTGATCCCACGCAGTTTCAAAACAATGCGCAGTTCAGTCTGGCAGGCAGCGGCTACGTCAATATGGGAGCGTATGACTACACGCTGGTGGAAGATAACAACGACTGGTATCTGCGATCGCAAGAAGTAACGCCGCCATCGCCACCTGATCCAGACCCGACTCCCGATCCTGATCCCACGCCGGATCCTGATCCAACACCCGACCCGGAACCTACGCCTGCTTACCAGCCGGTGTTGAATGCCAAAGTTGGCGGTTATCTTAATAACCTGCGGGCGGCAAATCAGGCGTTTATGATGGAGCGACGCGATCACGCAGGTGGCGATGGTCAGACGCTGAATTTACGTGTTATCGGCGGAGATTATCATTACACAGCAGCGGGGCAACTGGCTCAACATGAAGACACTTCTACGGTGCAACTTAGCGGCGATCTGTTTAGCGGGCGCTGGGGCACGGATGGCGAGTGGATGCTTGGGATTGTTGGTGGCTACAGCGATAACCAGGGCGACAGCCGCTCGAATATGACCGGAACTCGCGCCGATAACCAGAACCACGGTTATGCCGTTGGGCTGACATCAAGCTGGTTTCAGCACGGTAATCAGAAGCAAGGGGCCTGGCTGGATAGCTGGCTGCAATACGCGTGGTTTAGCAATGATGTTTCCGAACAAGAAGATGGCACAGATCATTACCACTCGTCGGGGATTATCGCCTCGCTGGAGGCGGGGTATCAGTGGTTACCGGGGCGTGGTGTGGTGATTGAACCGCAGGCGCAGGTGATTTATCAGGGCGTGCAGCAGGATGATTTTACCGCCGCTAACCGTGCGCGCGTGTCACAATCGCAGGGTGATGATATTCAGACGCGGCTGGGTTTACACAGCGAATGGCGTACCGCTGTTCATGTCATACCAACATTAGATCTGAATTATTATCACGATCCCCATTCGACGGAAATTGAAGAGGATGGCAGCACTATCAGTGACGATGCGGTGAAGCAACGGGGTGAAATAAAAGTGGGAGTCACGGGCAATATCAGTCAGCGAGTGTCCCTGCGCGGCAGCGTGGCGTGGCAGAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAA", - "dna_sequence_length": 3753, - "functions": [ - "adhesin" - ], - "id": "CDS_2216", - "location": [ - [ - "NC_000913", - 2344169, - "-", - 3753 - ] - ], - "md5": "de22672f0d961ad18cd7b4111e087290", - "parent_gene": "", - "protein_md5": "e7ea4d4071425a388aa0bd71c4e49ecb", - "protein_translation": "MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW", - "protein_translation_length": 1250, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "nrdA" - ], - [ - "gene_synonym", - "NP_416737.1" - ], - [ - "gene_synonym", - "JW2228" - ], - [ - "gene_synonym", - "EcoGene:EG10660" - ], - [ - "gene_synonym", - "GeneID:946612" - ], - [ - "gene_synonym", - "ECK2226" - ], - [ - "gene_synonym", - "GI:16130169" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00452" - ], - [ - "gene_synonym", - "dnaF" - ], - [ - "gene_synonym", - "ASAP:ABE-0007383" - ], - [ - "gene_synonym", - "b2234" - ] - ], - "dna_sequence": "ATGAATCAGAATCTGCTGGTGACAAAGCGCGACGGTAGCACAGAGCGCATCAATCTCGACAAAATCCATCGCGTTCTGGATTGGGCGGCAGAAGGACTGCATAACGTTTCGATTTCCCAGGTCGAGCTGCGCTCCCACATTCAGTTTTATGACGGTATCAAGACCTCTGACATCCACGAAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAAGACTACACGGAAGAAGAGTTCAAGCAGATGGACACCTTTATCGATCACGACCGTGATATGACCTTCTCTTATGCTGCCGTTAAGCAGCTGGAAGGCAAATATCTGGTACAGAACCGCGTGACCGGCGAAATCTATGAGAGCGCCCAGTTCCTTTATATTCTAGTTGCCGCGTGCTTGTTCTCGAACTACCCGCGTGAAACGCGCCTGCAATATGTGAAGCGTTTTTACGACGCGGTTTCCACATTTAAAATTTCGCTGCCGACGCCAATCATGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCAGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGGTGAAGCGTTCCATACCGGCTGCATTCCGTTCTACAAACATTTCCAGACAGCGGTGAAATCCTGCTCTCAGGGCGGTGTGCGCGGCGGTGCGGCAACGCTGTTCTACCCGATGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGTTGAAAAACAACCGTGGTGTGGAAGGCAACCGCGTGCGTCATATGGACTACGGGGTACAAATCAACAAACTGATGTATACCCGTCTGCTGAAAGGTGAAGATATCACCCTGTTCAGCCCGTCCGACGTACCGGGGCTGTACGACGCGTTCTTCGCCGATCAGGAAGAGTTTGAACGTCTGTATACCAAATATGAGAAAGACGACAGCATCCGCAAGCAGCGTGTGAAAGCCGTTGAGCTGTTCTCGCTGATGATGCAGGAACGTGCGTCTACCGGTCGTATCTATATTCAGAACGTTGACCACTGCAATACCCATAGCCCGTTTGATCCGGCCATCGCGCCAGTGCGTCAGTCTAACCTGTGCCTGGAGATAGCCCTGCCGACCAAACCGCTGAACGACGTCAACGACGAGAACGGTGAAATCGCGCTGTGTACGCTGTCTGCTTTCAACCTGGGCGCAATTAATAACCTGGATGAACTGGAAGAGCTGGCAATTCTGGCGGTTCGTGCACTTGACGCGCTGCTGGATTATCAGGATTACCCGATCCCGGCCGCCAAACGTGGAGCGATGGGTCGTCGTACGCTGGGTATTGGTGTGATCAACTTCGCTTACTACCTGGCGAAGCACGGTAAACGCTACTCCGACGGCAGCGCCAACAACCTGACGCATAAAACCTTCGAAGCCATTCAGTATTACCTGCTGAAAGCCTCTAATGAGCTGGCGAAAGAGCAAGGCGCGTGCCCGTGGTTTAACGAAACCACTTACGCGAAAGGGATCCTGCCGATCGATACCTATAAGAAAGATCTGGATACCATCGCTAATGAGCCGCTGCATTACGACTGGGAAGCTCTGCGTGAGTCAATCAAAACGCACGGTCTGCGTAACTCCACGCTTTCTGCTCTGATGCCGTCCGAGACTTCTTCGCAGATCTCTAACGCCACTAACGGTATTGAACCGCCGCGCGGTTACGTCAGCATCAAAGCGTCGAAAGACGGTATTTTGCGCCAGGTGGTGCCGGACTACGAGCACCTGCACGACGCCTATGAGCTGCTGTGGGAAATGCCGGGTAACGATGGTTATCTGCAACTGGTGGGTATCATGCAGAAATTTATCGATCAGTCGATCTCTGCCAACACCAACTACGATCCGTCACGCTTCCCGTCAGGAAAAGTGCCGATGCAGCAGTTGCTGAAAGACCTGCTCACCGCCTACAAATTCGGGGTCAAAACACTGTATTATCAGAACACCCGTGACGGCGCTGAAGACGCACAAGACGATCTGGTGCCGTCAATCCAGGACGATGGCTGCGAAAGCGGCGCATGTAAGATCTGA", - "dna_sequence_length": 2286, - "functions": [ - "ribonucleoside-diphosphate reductase 1, alpha subunit" - ], - "id": "CDS_2217", - "location": [ - [ - "NC_000913", - 2344865, - "+", - 2286 - ] - ], - "md5": "0be45d70c8ebad0fd24c8f28c61288a9", - "parent_gene": "", - "protein_md5": "f9d2eccb4ff08f489d1e0eba3537db2b", - "protein_translation": "MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI", - "protein_translation_length": 761, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416738.1" - ], - [ - "gene_synonym", - "nrdB" - ], - [ - "gene_synonym", - "JW2229" - ], - [ - "gene_synonym", - "ftsB" - ], - [ - "gene_synonym", - "GeneID:946732" - ], - [ - "gene_synonym", - "EcoGene:EG10661" - ], - [ - "gene_synonym", - "ECK2227" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69924" - ], - [ - "gene_synonym", - "GI:16130170" - ], - [ - "gene_synonym", - "b2235" - ], - [ - "gene_synonym", - "ASAP:ABE-0007386" - ] - ], - "dna_sequence": "ATGGCATATACCACCTTTTCACAGACGAAAAATGATCAGCTCAAAGAACCGATGTTCTTTGGTCAGCCGGTCAACGTGGCTCGCTACGATCAGCAAAAATATGACATCTTCGAAAAGCTGATCGAAAAGCAGCTCTCTTTCTTCTGGCGTCCGGAAGAAGTTGACGTCTCCCGCGACCGTATAGATTACCAGGCGCTGCCGGAGCACGAAAAACACATCTTTATCAGCAACCTGAAATATCAGACGCTGCTGGATTCCATTCAGGGTCGTAGCCCGAACGTGGCGCTATTGCCGCTTATTTCTATTCCGGAACTGGAAACCTGGGTCGAAACCTGGGCGTTCTCAGAAACGATTCATTCCCGTTCCTATACTCATATCATTCGTAATATCGTTAACGATCCGTCTGTTGTGTTTGACGATATCGTCACCAACGAGCAGATCCAGAAACGTGCGGAAGGGATCTCCAGCTATTACGATGAGCTGATCGAAATGACCAGCTACTGGCATCTGCTGGGCGAAGGTACCCACACCGTTAACGGTAAAACTGTGACCGTTAGCCTGCGCGAGCTGAAGAAAAAACTGTATCTCTGCCTGATGAGCGTTAACGCGCTGGAAGCGATTCGTTTCTACGTCAGCTTTGCTTGTTCCTTCGCATTTGCAGAACGCGAATTGATGGAAGGCAACGCCAAAATTATTCGCCTGATTGCCCGCGACGAAGCCCTGCACCTGACCGGCACCCAGCATATGCTGAATCTGCTGCGCAGCGGCGCGGACGATCCTGAGATGGCGGAAATTGCCGAAGAGTGTAAGCAGGAGTGCTATGACCTGTTTGTTCAGGCAGCTCAACAGGAGAAAGACTGGGCGGATTATCTGTTCCGCGACGGTTCGATGATTGGTCTGAATAAAGACATTCTCTGCCAGTACGTTGAATACATCACCAATATCCGTATGCAGGCAGTCGGTTTGGATCTGCCGTTCCAGACGCGCTCCAACCCGATCCCGTGGATCAACACTTGGCTGGTGTCTGATAACGTGCAGGTTGCTCCGCAGGAAGTGGAAGTCAGTTCTTATCTGGTCGGGCAGATTGACTCGGAAGTGGACACCGACGATTTGAGTAACTTCCAGCTCTGA", - "dna_sequence_length": 1131, - "functions": [ - "ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like protein" - ], - "id": "CDS_2218", - "location": [ - [ - "NC_000913", - 2347384, - "+", - 1131 - ] - ], - "md5": "3954c190d9264d089267ea4d5f432a3d", - "parent_gene": "", - "protein_md5": "e2a65a197fb38a1c189138d23a86bc98", - "protein_translation": "MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL", - "protein_translation_length": 376, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2228" - ], - [ - "gene_synonym", - "GI:16130171" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABW3" - ], - [ - "gene_synonym", - "EcoGene:EG12360" - ], - [ - "gene_synonym", - "GeneID:946729" - ], - [ - "gene_synonym", - "NP_416739.1" - ], - [ - "gene_synonym", - "JW2230" - ], - [ - "gene_synonym", - "yfaE" - ], - [ - "gene_synonym", - "b2236" - ], - [ - "gene_synonym", - "ASAP:ABE-0007390" - ] - ], - "dna_sequence": "ATGGCCCGCGTTACCCTGCGCATCACTGGCACACAACTGCTGTGCCAGGATGAACACCCTTCCCTTCTGGCGGCGCTGGAATCCCACAATGTGGCGGTTGAGTACCAGTGTCGCGAAGGTTACTGCGGCTCCTGTCGCACACGCCTGGTTGCAGGTCAAGTTGACTGGATTGCCGAACCGTTAGCCTTTATTCAGCCGGGGGAAATTTTGCCCTGTTGTTGCCGGGCAAAAGGCGATATTGAAATCGAGATGTGA", - "dna_sequence_length": 255, - "functions": [ - "ferredoxin involved with ribonucleotide reductase diferric-tyrosyl radical (Y*) cofactor maintenance" - ], - "id": "CDS_2219", - "location": [ - [ - "NC_000913", - 2348514, - "+", - 255 - ] - ], - "md5": "7d50181cc6ba7bfa1746fc4797b5f55f", - "parent_gene": "", - "protein_md5": "953a383e057175bf1bc9183454c0f221", - "protein_translation": "MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM", - "protein_translation_length": 84, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416740.1" - ], - [ - "gene_synonym", - "ECK2229" - ], - [ - "gene_synonym", - "GeneID:946731" - ], - [ - "gene_synonym", - "GI:16130172" - ], - [ - "gene_synonym", - "JW2231" - ], - [ - "gene_synonym", - "yfaG" - ], - [ - "gene_synonym", - "EcoGene:EG11422" - ], - [ - "gene_synonym", - "b2237" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27294" - ], - [ - "gene_synonym", - "ASAP:ABE-0007393" - ], - [ - "gene_synonym", - "inaA" - ] - ], - "dna_sequence": "ATGGCAGTTTCAGCAAAGTACGACGAATTTAATCACTGGTGGGCAACAGAGGGCGACTGGGTTGAAGAGCCTAACTATCGCCGTAATGGTATGAGCGGGGTGCAATGCGTCGAGCGCAACGGCAAAAAGCTGTATGTAAAGCGCATGACGCATCATCTGTTTCATTCCGTACGTTATCCGTTCGGCCGACCAACGATTGTCCGTGAGGTTGCGGTAATTAAAGAACTGGAACGGGCCGGTGTCATCGTGCCGAAGATCGTTTTTGGTGAAGCGGTGAAAATTGAGGGTGAATGGCGAGCGTTGCTGGTGACTGAAGATATGGCGGGGTTCATCAGCATTGCTGACTGGTATGCCCAGCATGCAGTATCGCCTTATTCTGACGAAGTACGGCAAGCCATGTTGAAAGCAGTGGCGCTGGCGTTTAAGAAAATGCATAGCATTAATCGTCAGCATGGCTGTTGTTATGTTCGCCATATCTATGTGAAAACAGAAGGTAATGCAGAAGCTGGTTTTCTTGACCTGGAGAAAAGTCGTCGCCGCTTGCGTCGCGATAAAGCGATTAATCATGACTTCCGCCAGCTGGAAAAATATCTGGAGCCAATCCCCAAAGCGGACTGGGAGCAGGTGAAAGCGTATTACTACGCCATGTAA", - "dna_sequence_length": 651, - "functions": [ - "acid-inducible Kdo/WaaP family putative kinase" - ], - "id": "CDS_2220", - "location": [ - [ - "NC_000913", - 2349472, - "-", - 651 - ] - ], - "md5": "6767c781aba3714d2fe97f2bc5032722", - "parent_gene": "", - "protein_md5": "b5ec566bfbe36672b78744d86c0b9e27", - "protein_translation": "MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM", - "protein_translation_length": 216, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45505" - ], - [ - "gene_synonym", - "EcoGene:EG12881" - ], - [ - "gene_synonym", - "GeneID:946718" - ], - [ - "gene_synonym", - "JW2232" - ], - [ - "gene_synonym", - "ECK2230" - ], - [ - "gene_synonym", - "b2238" - ], - [ - "gene_synonym", - "ASAP:ABE-0007397" - ], - [ - "gene_synonym", - "yfaH" - ] - ], - "dna_sequence": "CAGATAAAATGTGAATTTAATCAGGCGGATACAGCGATGAATTTTATTCGACAGGGATTAGGCATCGCCTTACAACCAGAGTTAACGCTGAAAAGCATTGCAGGTGAATTGTGTTCCGTTCCTCTCGAACCAACTTTCTATCGACAGATTTCGTTGCTGGCTAAAGAAAAGCCGGTAGAAGGCAGTCCACTGTTTTTACTACAAATGTGCATGGAACAATTAGTGGCGATTGGAAAAATTTGA", - "dna_sequence_length": 243, - "id": "CDS_2221", - "location": [ - [ - "NC_000913", - 2349651, - "+", - 243 - ] - ], - "md5": "04b7b27ba230e18c6b0395e2346c5f44", - "parent_gene": "", - "protein_md5": "4fcd6ff338f2b663419ad3d68de54433", - "protein_translation": "QIKCEFNQADTAMNFIRQGLGIALQPELTLKSIAGELCSVPLEPTFYRQISLLAKEKPVEGSPLFLLQMCMEQLVAIGKI", - "protein_translation_length": 80, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130174" - ], - [ - "gene_synonym", - "glpQ" - ], - [ - "gene_synonym", - "ECK2231" - ], - [ - "gene_synonym", - "JW2233" - ], - [ - "gene_synonym", - "GeneID:946725" - ], - [ - "gene_synonym", - "EcoGene:EG10399" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09394" - ], - [ - "gene_synonym", - "NP_416742.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007399" - ], - [ - "gene_synonym", - "b2239" - ] - ], - "dna_sequence": "ATGAAATTGACGCTGAAAAACCTTAGCATGGCGATCATGATGAGCACTATAGTCATGGGAAGCAGTGCAATGGCGGCGGACAGCAACGAAAAAATAGTCATCGCCCATCGCGGTGCCAGTGGATATTTGCCGGAGCATACGCTGCCAGCAAAAGCGATGGCGTATGCGCAGGGAGCGGATTATCTGGAACAGGATTTGGTGATGACCAAAGACGACAATCTGGTTGTTCTGCATGACCATTACCTCGATCGTGTTACTGATGTTGCCGATCGTTTCCCGGATCGGGCGCGCAAAGACGGTCGTTACTACGCGATAGATTTCACGCTGGATGAAATTAAGTCGTTGAAATTTACCGAAGGTTTCGATATTGAAAACGGTAAAAAAGTGCAGACTTATCCGGGGCGTTTCCCAATGGGTAAGTCCGACTTCCGGGTGCACACCTTTGAAGAAGAGATTGAATTTGTTCAGGGGTTAAATCACTCTACCGGGAAAAATATCGGTATTTATCCAGAAATCAAAGCGCCGTGGTTCCATCATCAGGAAGGGAAGGATATTGCGGCAAAAACGCTGGAAGTGCTGAAGAAATATGGTTACACCGGTAAAGACGATAAAGTTTATTTGCAATGTTTTGATGCTGATGAGCTGAAGCGTATTAAGAATGAGCTGGAACCCAAAATGGGCATGGAGCTCAATCTGGTACAGCTGATTGCCTATACCGACTGGAATGAAACGCAGCAGAAACAGCCGGATGGAAGCTGGGTTAATTACAACTACGACTGGATGTTTAAGCCGGGTGCCATGAAACAGGTGGCGGAATATGCAGATGGTATTGGTCCGGATTACCATATGTTGATTGAGGAGACATCGCAGCCGGGTAATATCAAACTCACTGGCATGGTGCAAGATGCTCAGCAGAATAAACTGGTAGTGCATCCTTATACCGTGCGGTCAGATAAACTGCCTGAATACACTCCTGATGTGAATCAGTTATATGATGCTCTGTATAACAAAGCGGGTGTAAATGGGCTGTTTACTGATTTCCCTGATAAGGCAGTAAAATTTCTTAATAAAGAGTAA", - "dna_sequence_length": 1077, - "functions": [ - "periplasmic glycerophosphodiester phosphodiesterase" - ], - "id": "CDS_2222", - "location": [ - [ - "NC_000913", - 2351011, - "-", - 1077 - ] - ], - "md5": "2d145a337beb52b3f5a5d0da6a6f0802", - "parent_gene": "", - "protein_md5": "67882c4e9737003286e3907e7f333289", - "protein_translation": "MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE", - "protein_translation_length": 358, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "glpT" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08194" - ], - [ - "gene_synonym", - "GI:16130175" - ], - [ - "gene_synonym", - "GeneID:946704" - ], - [ - "gene_synonym", - "JW2234" - ], - [ - "gene_synonym", - "ECK2232" - ], - [ - "gene_synonym", - "NP_416743.1" - ], - [ - "gene_synonym", - "b2240" - ], - [ - "gene_synonym", - "ASAP:ABE-0007401" - ], - [ - "gene_synonym", - "EcoGene:EG10401" - ] - ], - "dna_sequence": "ATGTTGAGTATTTTTAAACCAGCGCCACACAAAGCGCGCTTACCTGCCGCGGAGATCGATCCGACTTATCGTCGATTGCGCTGGCAAATTTTCCTGGGGATATTCTTTGGCTATGCGGCTTACTATTTGGTTCGTAAGAACTTTGCGCTTGCTATGCCTTATCTGGTTGAGCAGGGATTCTCACGCGGTGATTTAGGTTTTGCCCTTTCGGGGATCTCGATTGCTTATGGATTTTCGAAATTCATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGTGATGTTTGTACTGTTGTTCCTCTGCGGTTGGTTCCAGGGGATGGGGTGGCCGCCGTGTGGTCGTACTATGGTGCACTGGTGGTCGCAGAAAGAACGTGGCGGCATTGTGTCAGTGTGGAACTGTGCGCACAACGTCGGTGGTGGTATTCCGCCGCTGCTGTTCCTGCTGGGGATGGCCTGGTTCAATGACTGGCATGCGGCGCTCTATATGCCTGCTTTCTGCGCCATTCTGGTGGCATTATTCGCCTTTGCGATGATGCGCGATACCCCGCAATCCTGTGGCTTGCCGCCGATCGAAGAGTACAAAAATGATTATCCGGACGACTATAACGAAAAAGCGGAACAGGAGCTGACGGCGAAGCAAATCTTCATGCAGTACGTACTGCCGAACAAACTGCTGTGGTATATCGCCATCGCCAACGTGTTCGTTTATCTGCTGCGTTACGGCATCCTCGACTGGTCACCGACTTATCTGAAAGAGGTTAAGCATTTCGCGCTAGATAAATCCTCCTGGGCCTACTTCCTTTATGAATATGCAGGTATTCCGGGCACTCTGCTGTGCGGCTGGATGTCGGATAAAGTCTTCCGTGGCAACCGTGGGGCAACCGGCGTTTTCTTTATGACACTGGTGACCATCGCGACTATCGTTTACTGGATGAACCCGGCAGGTAACCCAACCGTCGATATGATTTGTATGATTGTTATCGGCTTCCTGATCTACGGTCCTGTGATGCTGATCGGTCTGCATGCGCTGGAACTGGCACCGAAAAAAGCGGCAGGTACGGCAGCGGGCTTTACCGGGCTGTTTGGTTACCTGGGCGGTTCGGTGGCGGCGAGCGCGATTGTTGGCTACACCGTGGACTTCTTCGGCTGGGATGGCGGCTTTATGGTAATGATTGGCGGCAGCATTCTGGCGGTTATCTTGTTGATTGTTGTGATGATTGGCGAAAAACGTCGCCATGAACAATTACTGCAAGAACGCAACGGAGGCTAA", - "dna_sequence_length": 1359, - "functions": [ - "sn-glycerol-3-phosphate transporter" - ], - "id": "CDS_2223", - "location": [ - [ - "NC_000913", - 2352374, - "-", - 1359 - ] - ], - "md5": "667dc72bfe7eaddd2d5fc2e3541f7ce1", - "parent_gene": "", - "protein_md5": "3cb27b5035c6584dc64a43127e022cb8", - "protein_translation": "MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQERNGG", - "protein_translation_length": 452, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130176" - ], - [ - "gene_synonym", - "NP_416744.1" - ], - [ - "gene_synonym", - "JW2235" - ], - [ - "gene_synonym", - "GeneID:946713" - ], - [ - "gene_synonym", - "ECK2233" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9C0" - ], - [ - "gene_synonym", - "glpA" - ], - [ - "gene_synonym", - "b2241" - ], - [ - "gene_synonym", - "EcoGene:EG10391" - ], - [ - "gene_synonym", - "ASAP:ABE-0007422" - ] - ], - "dna_sequence": "ATGAAAACTCGCGACTCGCAATCAAGTGACGTGATTATCATTGGCGGCGGCGCAACGGGAGCCGGGATTGCCCGCGACTGTGCCCTGCGCGGGCTGCGCGTGATTTTGGTTGAGCGCCACGACATCGCAACCGGTGCCACCGGGCGTAACCACGGCCTGCTGCACAGCGGTGCGCGCTATGCGGTAACCGATGCGGAATCGGCCCGCGAATGCATTAGTGAAAACCAGATCCTGAAACGCATTGCACGTCACTGCGTTGAACCAACCAACGGCCTGTTTATCACCCTGCCGGAAGATGACCTCTCCTTCCAGGCCACTTTTATTCGCGCCTGCGAAGAAGCAGGGATCAGCGCAGAAGCTATAGACCCGCAGCAAGCGCGCATTATCGAACCTGCCGTTAACCCGGCACTGATTGGCGCGGTGAAAGTTCCGGATGGCACCGTTGATCCATTTCGTCTGACCGCAGCAAACATGCTGGATGCCAAAGAACACGGTGCCGTTATCCTTACCGCTCATGAAGTCACGGGGCTGATTCGTGAAGGCGCGACGGTGTGCGGTGTTCGTGTACGTAACCATCTCACCGGCGAAACTCAGGCCCTTCATGCACCTGTCGTGGTTAATGCCGCTGGGATCTGGGGGCAACACATTGCCGAATATGCCGATCTGCGCATTCGCATGTTCCCGGCGAAAGGATCGCTGCTGATCATGGATCACCGCATTAACCAGCATGTGATCAACCGCTGCCGTAAACCTTCCGACGCCGATATTCTGGTGCCTGGCGATACCATTTCGCTGATTGGTACCACCTCTTTACGTATTGATTACAACGAGATTGACGATAATCGAGTGACGGCAGAAGAGGTTGATATTCTGCTGCGTGAAGGGGAAAAACTGGCCCCCGTGATGGCGAAAACGCGCATTTTGCGGGCCTATTCTGGCGTGCGCCCGCTGGTTGCCAGCGATGACGACCCGAGCGGACGTAACGTCAGCCGTGGCATCGTGCTGCTCGACCATGCTGAACGCGATGGTCTGGACGGATTTATCACCATCACCGGTGGCAAACTGATGACCTATCGGCTGATGGCTGAATGGGCTACCGACGCGGTATGCCGCAAACTGGGCAACACGCGCCCCTGTACGACTGCCGATCTGGCACTGCCTGGTTCACAAGAACCCGCTGAAGTTACCTTGCGTAAAGTCATCTCCCTGCCTGCCCCGCTGCGCGGTTCTGCGGTTTATCGTCATGGCGATCGCACGCCTGCCTGGCTGAGCGAAGGCCGTCTGCACCGTAGCCTGGTATGTGAGTGCGAAGCGGTAACTGCGGGTGAAGTGCAGTACGCGGTAGAAAATTTAAACGTTAATAGCCTGCTGGATTTACGCCGTCGTACCCGTGTGGGGATGGGCACCTGCCAGGGCGAACTCTGCGCCTGCCGCGCTGCCGGACTGCTGCAACGTTTTAACGTCACGACGTCCGCGCAATCTATCGAGCAACTTTCCACCTTCCTTAACGAACGCTGGAAAGGCGTGCAACCCATCGCCTGGGGAGATGCACTGCGCGAAAGCGAATTTACCCGCTGGGTTTATCAGGGATTGTGTGGTCTGGAGAAGGAGCAGAAAGATGCGCTTTGA", - "dna_sequence_length": 1629, - "functions": [ - "anaerobic sn-glycerol-3-phosphate dehydrogenase, large FAD/NAD(P)-binding subunit" - ], - "id": "CDS_2224", - "location": [ - [ - "NC_000913", - 2352647, - "+", - 1629 - ] - ], - "md5": "2c9c0d6904b9a04e20e5420d62760eef", - "parent_gene": "", - "protein_md5": "d900316f35f93d7ed5b6392a307ddcb3", - "protein_translation": "MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL", - "protein_translation_length": 542, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "psi-51" - ], - [ - "gene_synonym", - "GI:16130177" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P13033" - ], - [ - "gene_synonym", - "JW2236" - ], - [ - "gene_synonym", - "ECK2234" - ], - [ - "gene_synonym", - "GeneID:946733" - ], - [ - "gene_synonym", - "b2242" - ], - [ - "gene_synonym", - "ASAP:ABE-0007424" - ], - [ - "gene_synonym", - "glpC" - ], - [ - "gene_synonym", - "glpB" - ], - [ - "gene_synonym", - "NP_416745.1" - ], - [ - "gene_synonym", - "EcoGene:EG10392" - ] - ], - "dna_sequence": "ATGCGCTTTGATACTGTCATTATGGGCGGCGGCCTCGCCGGATTACTCTGTGGCCTGCAACTGCAAAAACACGGCCTGCGCTGTGCCATTGTCACTCGTGGTCAAAGCGCACTGCATTTCTCATCCGGATCGCTGGATTTGCTGAGCCATCTGCCAGATGGTCAACCGGTGACAGACATTCACAGTGGACTGGAATCTTTGCGTCAGCAGGCACCAGCCCATCCTTACTCCCTTCTCGAGCCACAACGCGTGCTCGATCTCGCTTGCCAGGCGCAGGCATTAATCGCTGAAAGCGGTGCGCAATTGCAGGGCAGCGTAGAACTTGCTCACCAGCGGGTTACGCCGCTCGGCACTCTGCGCTCTACCTGGCTAAGTTCGCCAGAAGTCCCCGTCTGGCCGCTGCCCGCGAAGAAAATATGTGTAGTGGGAATTAGCGGCCTGATGGATTTTCAGGCGCACCTTGCGGCAGCTTCGTTGCGTGAACTCGGCCTTGCCGTTGAAACCGCAGAAATAGAGCTGCCGGAACTGGATGTGCTGCGCAATAACGCCACCGAATTTCGCGCGGTGAATATCGCCCGTTTCCTTGATAATGAAGAAAACTGGCCGCTGTTACTTGATGCGCTTATTCCTGTCGCCAATACCTGCGAAATGATCCTGATGCCCGCCTGCTTCGGTCTGGCCGATGACAAACTGTGGCGTTGGTTGAATGAAAAACTACCTTGTTCACTGATGCTTTTGCCAACGCTGCCGCCTTCCGTGCTGGGCATTCGTCTGCAAAACCAGTTACAGCGCCAGTTTGTGCGCCAGGGTGGCGTGTGGATGCCGGGCGATGAAGTGAAAAAAGTGACCTGTAAAAATGGCGTAGTGAACGAAATCTGGACCCGCAATCACGCCGATATTCCGCTACGTCCACGTTTCGCGGTTCTCGCCAGCGGCAGTTTCTTTAGTGGCGGACTGGTAGCGGAACGTAACGGCATTCGAGAGCCGATTCTCGGCCTTGATGTGCTACAAACCGCCACGCGGGGTGAATGGTATAAGGGAGATTTTTTTGCGCCGCAACCGTGGCAGCAGTTCGGTGTAACCACTGATGAGACGCTACGCCCGTCACAGGCAGGGCAAACCATTGAAAACCTGTTTGCCATCGGTTCGGTGCTGGGCGGATTTGATCCCATCGCCCAGGGATGCGGCGGCGGTGTTTGTGCCGTCAGTGCTTTACATGCCGCTCAACAGATTGCCCAACGCGCAGGAGGCCAACAATGA", - "dna_sequence_length": 1260, - "functions": [ - "anaerobic sn-glycerol-3-phosphate dehydrogenase membrane anchor subunit" - ], - "id": "CDS_2225", - "location": [ - [ - "NC_000913", - 2354265, - "+", - 1260 - ] - ], - "md5": "42f09078a14ef676fdee1bb842a10ca0", - "parent_gene": "", - "protein_md5": "a4f456db1f3984264180d0e626155bd5", - "protein_translation": "MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ", - "protein_translation_length": 419, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946735" - ], - [ - "gene_synonym", - "GI:16130178" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A996" - ], - [ - "gene_synonym", - "ECK2235" - ], - [ - "gene_synonym", - "JW2237" - ], - [ - "gene_synonym", - "glpB" - ], - [ - "gene_synonym", - "b2243" - ], - [ - "gene_synonym", - "ASAP:ABE-0007426" - ], - [ - "gene_synonym", - "glpC" - ], - [ - "gene_synonym", - "NP_416746.1" - ], - [ - "gene_synonym", - "EcoGene:EG10393" - ] - ], - "dna_sequence": "ATGAATGACACCAGCTTCGAAAACTGCATTAAGTGCACCGTCTGCACCACCGCCTGCCCGGTGAGCCGGGTGAATCCCGGTTATCCAGGGCCAAAACAAGCCGGGCCGGATGGCGAGCGTCTGCGTTTGAAAGATGGCGCACTGTATGACGAGGCGCTGAAATATTGCATCAACTGCAAACGTTGTGAAGTCGCCTGCCCGTCCGATGTGAAGATTGGCGATATTATCCAGCGCGCGCGGGCGAAATATGACACCACGCGCCCGTCGCTGCGTAATTTTGTGTTGAGTCATACCGACCTGATGGGTAGCGTTTCCACGCCGTTCGCACCAATCGTCAACACCGCTACCTCGCTGAAACCGGTGCGGCAGCTGCTTGATGCGGCGTTAAAAATCGATCATCGCCGCACGCTACCGAAATACTCCTTCGGCACGTTCCGTCGCTGGTATCGCAGCGTGGCGGCTCAGCAAGCACAATATAAAGACCAGGTCGCTTTCTTTCACGGCTGCTTCGTTAACTACAACCATCCGCAGTTAGGTAAAGATTTAATTAAAGTGCTCAACGCAATGGGTACCGGTGTACAACTGCTCAGCAAAGAAAAATGCTGCGGCGTACCGCTAATCGCCAACGGCTTTACCGATAAAGCACGCAAACAGGCAATTACGAATGTAGAGTCGATCCGCGAAGCTGTGGGAGTAAAAGGCATTCCGGTGATTGCCACCTCCTCAACCTGTACATTTGCCCTGCGCGACGAATACCCGGAAGTGCTGAATGTCGACAACAAAGGCTTGCGCGATCATATCGAACTGGCAACCCGCTGGCTGTGGCGCAAGCTGGACGAAGGCAAAACGTTACCGCTGAAACCGCTGCCGCTGAAAGTGGTTTATCACACTCCGTGCCATATGGAAAAAATGGGCTGGACGCTCTACACCCTGGAGCTGTTGCGTAACATCCCGGGGCTTGAGTTAACGGTGCTGGATTCCCAGTGCTGCGGTATTGCGGGTACTTACGGTTTCAAAAAAGAGAACTACCCCACCTCACAAGCCATCGGCGCACCACTGTTCCGCCAGATAGAAGAAAGCGGCGCAGATCTGGTGGTCACCGACTGCGAAACCTGTAAATGGCAGATTGAGATGTCCACAAGTCTTCGCTGCGAACATCCGATTACGCTACTGGCCCAGGCGCTGGCTTAA", - "dna_sequence_length": 1191, - "functions": [ - "anaerobic sn-glycerol-3-phosphate dehydrogenase, C subunit, 4Fe-4S iron-sulfur cluster" - ], - "id": "CDS_2226", - "location": [ - [ - "NC_000913", - 2355521, - "+", - 1191 - ] - ], - "md5": "45237fb17f50cc8f62020174ae91e8a7", - "parent_gene": "", - "protein_md5": "8882723c09e389ce65ef441feaedcfc6", - "protein_translation": "MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRNIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA", - "protein_translation_length": 396, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2244" - ], - [ - "gene_synonym", - "JW2238" - ], - [ - "gene_synonym", - "NP_416747.1" - ], - [ - "gene_synonym", - "ECK2236" - ], - [ - "gene_synonym", - "GI:16130179" - ], - [ - "gene_synonym", - "yfaD" - ], - [ - "gene_synonym", - "GeneID:946737" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37014" - ], - [ - "gene_synonym", - "EcoGene:EG12323" - ], - [ - "gene_synonym", - "ASAP:ABE-0007429" - ] - ], - "dna_sequence": "ATGACCGAATCAACAACCTCCTCCCCGCATGATGCGGTATTTAAAACCTTTATGTTCACACCCGAAACCGCACGGGATTTTCTCGAAATACATTTACCAGAACCACTGCGCAAGCTTTGCAACCTGCAAACCTTACGCCTGGAACCCACTAGTTTTATTGAAAAAAGTTTACGCGCTTACTACTCGGATGTTTTGTGGTCCGTGGAAACCAGCGACGGTGACGGCTATATCTACTGCGTGATTGAACATCAAAGCTCTGCAGAAAAGAATATGGCTTTTCGGCTAATGCGCTATGCCACTGCCGCCATGCAGCGTCACCAGGACAAAGGCTATGACAGAGTCCCGCTGGTGGTGCCGTTGCTGTTTTATCATGGCGAAACCTCGCCTTACCCGTACTCACTCAACTGGCTGGATGAGTTTGACGATCCGCAACTTGCCCGGCAGTTGTACACCGAAGCTTTTCTGTTGGTGGATATCACCATCGTACCTGACGATGAGATCATGCAACATCGGCGTATAGCTCTGCTGGAACTGATTCAAAAGCATATTCGCGACCGCGATTTAATCGGCATGGTCGACAGGATCACCACGCTTTTGGTTAGAGGCTTCACTAATGACAGCCAGCTACAAACACTGTTTAATTATCTGCTGCAATGCGGCGATACCTCCCGTTTCACCCGTTTTATTGAGGAGATTGCCGAACGTTCACCACTACAAAAGGAGAGATTAATGACTATTGCTGAACGGCTACGGCAGGAAGGGCATCAAATTGGCTGGCAGGAAGGTATGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGACAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAA", - "dna_sequence_length": 900, - "functions": [ - "transposase_31 family protein" - ], - "id": "CDS_2227", - "location": [ - [ - "NC_000913", - 2356904, - "+", - 900 - ] - ], - "md5": "aa14b1dc7a4c897da797bca0951b4c72", - "parent_gene": "", - "protein_md5": "9400523274123c62ddbfa002b9158ae1", - "protein_translation": "MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHQDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFLLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGFEREIVLATTQLTDADIPNCH", - "protein_translation_length": 299, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4543" - ], - [ - "gene_synonym", - "GeneID:1450280" - ], - [ - "gene_synonym", - "ASAP:ABE-0285064" - ], - [ - "gene_synonym", - "ECK2237" - ], - [ - "gene_synonym", - "ypaA" - ], - [ - "gene_synonym", - "EcoGene:EG14427" - ], - [ - "gene_synonym", - "JW5964" - ] - ], - "dna_sequence": "AAGGAGAGATTAATGACTATTGCTGAACGGCTGCGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAATTAGAAGGTTTGCATGAACAAGCCATTAAAATTGCTTTGCGCATGCTGGAACAGGGCTTTGATCGTGACCAGGTGCTCGCGGCCACCCAGCTAAGCGAAGCCGATCTGGCAGCGAATAACCACTAA", - "dna_sequence_length": 198, - "id": "CDS_2228", - "location": [ - [ - "NC_000913", - 2357804, - "+", - 198 - ] - ], - "md5": "d87eed20cc6a22e735f9cfc978d0e2ce", - "parent_gene": "", - "protein_md5": "b55b7a40d8db35fec9372898672a0878", - "protein_translation": "KERLMTIAERLRQEGHQIGWQEGKLEGLHEQAIKIALRMLEQGFDRDQVLAATQLSEADLAANNH", - "protein_translation_length": 65, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rhmA" - ], - [ - "gene_synonym", - "yfaU" - ], - [ - "gene_synonym", - "ECK2238" - ], - [ - "gene_synonym", - "JW2239" - ], - [ - "gene_synonym", - "b2245" - ], - [ - "gene_synonym", - "GeneID:948054" - ], - [ - "gene_synonym", - "GI:16130180" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76469" - ], - [ - "gene_synonym", - "NP_416748.1" - ], - [ - "gene_synonym", - "EcoGene:EG14083" - ], - [ - "gene_synonym", - "ASAP:ABE-0007431" - ] - ], - "dna_sequence": "ATGAACGCATTATTAAGCAATCCCTTTAAAGAACGTTTACGCAAGGGCGAAGTGCAAATTGGTCTGTGGTTAAGCTCAACGACTGCCTATATGGCAGAAATTGCCGCCACTTCTGGTTATGACTGGTTGCTGATTGACGGGGAGCACGCGCCAAACACCATTCAGGATCTTTATCATCAGCTACAGGCGGTAGCGCCCTATGCCAGCCAACCCGTGATCCGTCCGGTGGAAGGCAGTAAACCGCTGATTAAACAAGTCCTGGATATTGGCGCGCAAACTCTACTGATCCCGATGGTCGATACTGCCGAACAGGCACGTCAGGTGGTGTCTGCCACGCGCTATCCTCCCTACGGTGAGCGTGGTGTCGGGGCCAGTGTGGCACGGGCTGCGCGCTGGGGACGCATTGAGAATTACATGGCGCAAGTTAACGATTCGCTTTGTCTGTTGGTGCAGGTGGAAAGTAAAACGGCACTGGATAACCTGGACGAAATCCTCGACGTCGAAGGGATTGATGGCGTGTTTATTGGACCTGCGGATCTTTCTGCGTCGTTGGGCTACCCGGATAACGCCGGGCACCCGGAAGTGCAGCGAATTATTGAAACCAGTATTCGGCGGATCCGTGCTGCGGGTAAAGCGGCTGGTTTTCTGGCTGTGGCTCCTGATATGGCGCAGCAATGCCTGGCGTGGGGAGCGAACTTTGTCGCTGTTGGCGTTGACACGATGCTCTACAGCGATGCCCTGGATCAACGACTGGCGATGTTTAAATCAGGCAAAAATGGGCCACGCATAAAAGGTAGTTATTGA", - "dna_sequence_length": 804, - "functions": [ - "2-keto-3-deoxy-L-rhamnonate aldolase" - ], - "id": "CDS_2229", - "location": [ - [ - "NC_000913", - 2358845, - "-", - 804 - ] - ], - "md5": "77c73d1f444f00d902bd6d46db281b03", - "parent_gene": "", - "protein_md5": "e91610c3c11c3cb4105ed928db5f1743", - "protein_translation": "MNALLSNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY", - "protein_translation_length": 267, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfaV" - ], - [ - "gene_synonym", - "GeneID:945796" - ], - [ - "gene_synonym", - "ECK2239" - ], - [ - "gene_synonym", - "b2246" - ], - [ - "gene_synonym", - "GI:90111406" - ], - [ - "gene_synonym", - "rhmT" - ], - [ - "gene_synonym", - "ASAP:ABE-0007433" - ], - [ - "gene_synonym", - "EcoGene:EG14084" - ], - [ - "gene_synonym", - "NP_416749.4" - ], - [ - "gene_synonym", - "JW2240" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76470" - ] - ], - "dna_sequence": "ATGAGCACCGCTTTGCTTGACGCCGTGGTGAAGAAAAACCGTGTGCGTTTAATTCCGTTTATGTTGGCGCTGTATGTGCTGGCGTTTCTCGACCGTTCGAATATCGGTTTTGCCAAACAGACCTACCAGATTGATACCGGGTTGAGTAATGAAGCTTATGCGCTGGGAGCAGGCATTTTCTTTGTGGTATATGCGTTTCTGGGTGTTCCGGCGAATCTTTTGATGCGCAAACTGGGGGCCAGAACCTGGATTGGTACGACAACACTGCTGTGGGGATTTCTTTCGGCAGCCATGGCATGGGCCGATACTGAAGCGAAATTTCTGATAGTTCGCACTCTGCTTCGTGCTGCGGAGGCCGGATTTTTCCCTGGTATGATTTATCTCACCTCGCAATGGTTTCCGCAGCGTAATCGCGCCAGCATTATGGGGCTGTTCTATATGGGCGCACCGCTGGCGTTAACACTGGGATCACCGCTTTCCGGCGCGCTGTTGGAGATGCATGGATTTATGGGGCATCCCGGCTGGTTCTGGATGTTTGTGATTGAAGGATTGTTGGCAGTCGGTGCTGGGGTATTCACATTCTTTTGGCTTGATGACACACCGGAGCAGGCACGTTTTCTGAGTAAACAAGAAAAAACGTTGCTTATCAATCAACTGGCAAGTGAAGAACAACAGAAAGTGACTTCTCGGCTGAGCGATGCGCTGCGTAATGGCCGAGTCTGGCAACTAGCGATTATCTACCTGACCATTCAGGTGGCGGTTTACGGATTAATTTTCTTCCTGCCGACCCAGGTTGCGGCATTGCTGGGAACAAAAGTGGGCTTTACAGCGTCGGTGGTCACCGCCATTCCGTGGGTTGCGGCCTTGTTTGGGACCTGGCTTATTCCGCGCTATTCCGATAAAACCGGCGAACGGCGTAATGTCGCAGCGCTGACATTACTGGCGGCGGGCATTGGTATTGGTCTGTCCGGGCTGCTTTCTCCAGTAATGGCGATCGTAGCGCTGTGTGTTGCAGCTATCGGGTTTATTGCCGTGCAGCCAGTGTTCTGGACGATGCCGACACAACTGCTTTCCGGTACGGCGCTGGCTGCGGGAATTGGTTTTGTAAACCTGTTTGGTGCAGTGGGCGGGTTTATTGCCCCGATCCTGCGCGTGAAAGCAGAAACGTTATTTGCCAGCGATGCGGCGGGATTACTGACGCTGGCAGCGGTGGCGGTCATCGGTTCGCTGATTATTTTCACTCTGCGTGTAAATCGCACTGTTGCGCAGACCGACGTGGCACATCATTAA", - "dna_sequence_length": 1290, - "functions": [ - "putative L-rhamnonate transporter" - ], - "id": "CDS_2230", - "location": [ - [ - "NC_000913", - 2360152, - "-", - 1290 - ] - ], - "md5": "ac2f9c643ddc1bfaedfabe9d682dab22", - "parent_gene": "", - "protein_md5": "11c2f1945beb51cbf672ba040f973958", - "protein_translation": "MSTALLDAVVKKNRVRLIPFMLALYVLAFLDRSNIGFAKQTYQIDTGLSNEAYALGAGIFFVVYAFLGVPANLLMRKLGARTWIGTTTLLWGFLSAAMAWADTEAKFLIVRTLLRAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTLGSPLSGALLEMHGFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQLASEEQQKVTSRLSDALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAIPWVAALFGTWLIPRYSDKTGERRNVAALTLLAAGIGIGLSGLLSPVMAIVALCVAAIGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFASDAAGLLTLAAVAVIGSLIIFTLRVNRTVAQTDVAHH", - "protein_translation_length": 429, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfaW" - ], - [ - "gene_synonym", - "rhmD" - ], - [ - "gene_synonym", - "GeneID:945881" - ], - [ - "gene_synonym", - "b2247" - ], - [ - "gene_synonym", - "NP_416750.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77215" - ], - [ - "gene_synonym", - "GI:226524733" - ], - [ - "gene_synonym", - "ASAP:ABE-0007436" - ], - [ - "gene_synonym", - "EcoGene:EG14085" - ], - [ - "gene_synonym", - "JW2241" - ], - [ - "gene_synonym", - "ECK2240" - ] - ], - "dna_sequence": "ATGACCCTACCAAAAATTAAACAGGTTCGCGCCTGGTTTACTGGCGGTGCGACAGCAGAAAAAGGCGCTGGCGGCGGTGATTATCACGACCAGGGGGCGAATCACTGGATAGACGATCATATTGCCACCCCGATGAGTAAATACCGCGATTACGAGCAGTCACGCCAGTCATTTGGCATTAACGTTCTTGGCACGTTGGTTGTTGAAGTCGAAGCAGAAAACGGCCAGACCGGATTCGCCGTTTCGACAGCCGGTGAAATGGGCTGTTTTATTGTCGAAAAACATCTTAACCGTTTCATTGAGGGTAAATGTGTCAGTGATATCAAACTGATCCACGATCAAATGCTCAGTGCCACCCTGTATTACTCCGGCTCTGGTGGCCTGGTGATGAATACGATTTCTTGTGTCGATCTGGCTCTGTGGGATCTGTTCGGCAAAGTGGTCGGGCTTCCGGTTTATAAACTTTTAGGCGGCGCTGTTCGTGATGAGATTCAGTTCTACGCCACAGGTGCGCGTCCGGATCTGGCAAAAGAGATGGGCTTTATCGGTGGCAAAATGCCGACGCACTGGGGGCCACATGATGGCGATGCGGGGATCCGCAAAGATGCCGCTATGGTCGCGGATATGCGTGAAAAATGCGGTGAGGATTTCTGGTTAATGCTCGACTGCTGGATGAGTCAGGACGTGAACTATGCGACCAAACTGGCCCACGCTTGCGCGCCCTATAACCTGAAATGGATCGAAGAGTGCCTGCCGCCACAGCAGTATGAAAGTTATCGCGAACTGAAACGCAACGCGCCAGTCGGAATGATGGTCACCAGCGGTGAGCACCACGGCACACTGCAATCTTTTCGTACGCTTTCAGAAACCGGTATCGACATTATGCAGCCGGATGTTGGCTGGTGCGGTGGTTTAACCACGCTGGTGGAAATTGCCGCAATCGCCAAATCCAGGGGGCAACTGGTGGTGCCGCACGGTTCGTCTGTTTACTCTCACCATGCGGTGATCACCTTCACCAATACGCCATTCAGCGAATTCCTGATGACCAGCCCGGATTGTTCAACGATGCGTCCGCAGTTTGACCCGATTCTGCTCAATGAGCCGGTTCCGGTGAATGGTCGTATTCATAAATCAGTGCTTGATAAACCCGGTTTTGGCGTCGAACTCAATCGTGACTGCAATTTGAAACGCCCCTACAGCCACTAA", 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"GI:16130183" - ], - [ - "gene_synonym", - "NP_416751.1" - ], - [ - "gene_synonym", - "JW2242" - ], - [ - "gene_synonym", - "EcoGene:EG14086" - ], - [ - "gene_synonym", - "ASAP:ABE-0007438" - ], - [ - "gene_synonym", - "ECK2241" - ], - [ - "gene_synonym", - "GeneID:944752" - ] - ], - "dna_sequence": "ATGTTGGAATCAAGCAAAGTTCCCGCCCTGACACGGGCTATTGATATTCTCAATTTGATTGCCCGCATTGGCCCCTGTAGTGCTGCGACGATCATTGACACATTGGGAATCCCTAAAAGCACGGCCTATTTGCTGCTTAATGAACTCAGGCGTCAGCGTTTTCTTAGCCTTGATCACCAGGAAAATTTTTGTTTGTGGACCAGGCTGGTGGAGCTTTCCGGTCATGCGTTAAGCAAGATGGATCTCCGGGAACTGGCTCGACCGCGTTTGACGCAACTGATGGATACCACCGGGCTGTTATGTCACCTGGGGATTATTGATAACGGCAGCGCTTATTACATTTTGAAAGTGGAGTCATCAGCCACTATCAGCGTGCGTTCCCATGAAGGAAAAAGCCTTTCGCTTTATCGCTCCGGAATAGGTAAATGCCTGCTTGCCTGGCAACCTGCAGCGGTACAGCAAAGTATTATCGAAGGGCTGGTCTGGGAGCAGGCGACACCCACAACGATTACTCATCCACAGCAACTTCACGAAGAACTGGCGCGTATTCGCCGTCAGGGCTGGAGCTATGACAACGGCGAAGATTACGCCGATGTCCGTTGTGTCGCTGCGCCGGTGTTTAACGCCAATAACGAGCTTACCGCTGCGATCTCGGTGGTCGGTACCCGCTTACAAATCAATGAAGAATACCGTGATTATCTGGCGGGCAAGGCCATTGCCTGCGCCAGGGATATTTCACGTCTGTTGGGATGGAAAAGTCCCTTTGACTTACAAGCCTCATAA", - "dna_sequence_length": 783, - "functions": [ - "putative DNA-binding transcriptional regulator for the rhm operon" - ], - "id": "CDS_2232", - "location": [ - [ - "NC_000913", - 2362211, - "-", - 783 - ] - ], - "md5": "28c97c7e0e07c3c0da21c30c1d604215", - "parent_gene": "", - "protein_md5": "e64eb0a9e0852d8c674525b8f146f74d", - "protein_translation": "MLESSKVPALTRAIDILNLIARIGPCSAATIIDTLGIPKSTAYLLLNELRRQRFLSLDHQENFCLWTRLVELSGHALSKMDLRELARPRLTQLMDTTGLLCHLGIIDNGSAYYILKVESSATISVRSHEGKSLSLYRSGIGKCLLAWQPAAVQQSIIEGLVWEQATPTTITHPQQLHEELARIRRQGWSYDNGEDYADVRCVAAPVFNANNELTAAISVVGTRLQINEEYRDYLAGKAIACARDISRLLGWKSPFDLQAS", - "protein_translation_length": 260, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945478" - ], - [ - "gene_synonym", - "EcoGene:EG14087" - ], - [ - "gene_synonym", - "b2249" - ], - [ - "gene_synonym", - "GI:16130184" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77808" - ], - [ - "gene_synonym", - "cinA" - ], - [ - "gene_synonym", - "ASAP:ABE-0007441" - ], - [ - "gene_synonym", - "NP_416752.1" - ], - [ - "gene_synonym", - "JW2243" - ], - [ - "gene_synonym", - "yfaY" - ], - [ - "gene_synonym", - "ECK2242" - ] - ], - "dna_sequence": "ATGTTAAAAGTGGAAATGTTATCCACCGGGGATGAAGTGTTACACGGGCAAATCGTTGACACTAACGCTGCCTGGCTGGCCGATTTTTTCTTTCATCAGGGGTTGCCATTATCTCGCCGCAATACGGTGGGGGATAACCTTGATGACTTAGTCACCATTCTTCGCGAACGTAGTCAGCACGCCGATGTGCTGATCGTTAACGGCGGGCTGGGACCGACCAGCGATGATTTAAGCGCACTCGCCGCTGCGACAGCAAAAGGTGAAGGCCTGGTGCTGCATGAAGCCTGGCTCAAAGAGATGGAACGCTATTTCCACGAACGTGGACGAGTAATGGCACCGAGCAACCGTAAACAAGCGGAGCTGCCTGCCAGTGCTGAATTTATCAATAACCCGGTAGGCACCGCCTGTGGTTTTGCCGTGCAGCTTAATCGTTGCCTGATGTTCTTTACTCCCGGCGTACCGTCAGAATTTAAGGTGATGGTCGAGCACGAAATCCTGCCGCGCCTGCGCGAGCGTTTTTCTTTACCGCAGCCGCCGGTTTGTCTGCGTTTGACTACTTTTGGTCGTTCGGAAAGCGATCTGGCACAAAGCCTGGACACTCTACAACTGCCGCCGGGCGTAACAATGGGCTATCGCTCCTCAATGCCTATCATCGAACTGAAACTCACCGGACCGGCAAGCGAGCAACAGGCGATGGAAAAACTGTGGCTGGATGTTAAACGTGTTGCCGGACAGAGCGTGATTTTCGAAGGCACTGAAGGACTGCCCGCGCAGATCAGTCGCGAATTGCAAAACCGCCAGTTCAGCCTGACGTTGAGCGAGCAATTCACCGGTGGTTTATTGGCTTTGCAACTTTCTCGCGCAGGTGCTCCATTGCTGGCGTGTGAAGTGGTTCCTTCACAGGAGGAAACCCTGGCGCAAACTGCGCACTGGATTACAGAACGGCGGGCCAACCATTTTGCCGGGCTGGCACTGGCTGTTTCGGGTTTCGAGAACGAGCATCTCAACTTTGCGCTAGCCACGCCAGACGGCACTTTCGCTCTGCGTGTGCGTTTCAGCACTACGCGCTACAGCCTGGCTATCCGTCAGGAAGTGTGCGCAATGATGGCACTGAATATGCTGCGCCGTTGGTTAAACGGCCAGGATATCGCCAGTGAGCATGGCTGGATTGAGGTTGTTGAGTCCATGACCTTATCTGTCTGA", 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- "gene_synonym", - "GeneID:946739" - ], - [ - "gene_synonym", - "ASAP:ABE-0007445" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76471" - ], - [ - "gene_synonym", - "EcoGene:EG14088" - ], - [ - "gene_synonym", - "ECK2243" - ] - ], - "dna_sequence": "ATGAAAAAAATTGCGCTAGCAGGTCTGGCCGGAATGCTGTTGGTTTCTGCATCGGTCAATGCAATGAGCATCAGCGGTCAGGCGGGTAAAGAATACACCAATATTGGTGTCGGTTTTGGGACTGAAACGACGGGCCTGGCGTTAAGCGGTAACTGGACACATAACGACGACGACGGTGATGTCGCTGGCGTGGGGCTGGGGTTGAATCTGCCTCTCGGGCCGTTAATGGCGACCGTTGGCGGAAAAGGCGTTTACACCAACCCGAATTACGGCGATGAAGGTTATGCCGCAGCGGTAGGAGGTGGTTTGCAGTGGAAAATTGGCAACAGCTTCCGTTTGTTTGGCGAGTATTACTACTCTCCGGATTCGCTCTCCAGCGGTATTCAAAGTTATGAAGAAGCGAATGCTGGCGCGCGTTACACCATTATGCGTCCAGTCAGTATTGAGGCGGGTTATCGCTACCTGAATCTGTCGGGTAAAGACGGTAACCGCGACAACGCCGTGGCTGACGGCCCGTATGTTGGGGTTAACGCCAGTTTCTGA", - "dna_sequence_length": 543, - "functions": [ - "outer membrane protein, putative porin" - ], - "id": "CDS_2234", - "location": [ - [ - "NC_000913", - 2364275, - "-", - 543 - ] - ], - "md5": "bcc9ad481fdedfbd0b074a5708882991", - "parent_gene": "", - "protein_md5": "022b1be73d6845cd620a08416a36917c", - "protein_translation": "MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTETTGLALSGNWTHNDDDGDVAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGGLQWKIGNSFRLFGEYYYSPDSLSSGIQSYEEANAGARYTIMRPVSIEAGYRYLNLSGKDGNRDNAVADGPYVGVNASF", - "protein_translation_length": 180, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946740" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52006" - ], - [ - "gene_synonym", - "nudI" - ], - [ - "gene_synonym", - "b2251" - ], - [ - "gene_synonym", - "ASAP:ABE-0007449" - ], - [ - "gene_synonym", - "GI:16130186" - ], - [ - "gene_synonym", - "NP_416754.1" - ], - [ - "gene_synonym", - "ECK2244" - ], - [ - "gene_synonym", - "yfaO" - ], - [ - "gene_synonym", - "JW2245" - ], - [ - "gene_synonym", - "EcoGene:EG13275" - ] - ], - "dna_sequence": "GTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATGTCGCCACCCGAAAAACGTTACGTTTGAAAGGTCTTCTGTAA", - "dna_sequence_length": 426, - "functions": [ - "nucleoside triphosphatase" - ], - "id": "CDS_2235", - "location": [ - [ - "NC_000913", - 2364554, - "+", - 426 - ] - ], - "md5": "ad093500e16dec8d41b7fdb5a1806e2f", - "parent_gene": "", - "protein_md5": "8d1d62fcb652c6ce521596b1870699ee", - "protein_translation": "MRQRTIVCPLIQNDGAYLLCKMADDRGVFPGQWAISGGGVEPGERIEEALRREIREELGEQLLLTEITPWTFSDDIRTKTYADGRKEEIYMIYLIFDCVSANREVKINEEFQDYAWVKPEDLVHYDLNVATRKTLRLKGLL", - "protein_translation_length": 141, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944945" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45565" - ], - [ - "gene_synonym", - "b2252" - ], - [ - "gene_synonym", - "pmrG" - ], - [ - "gene_synonym", - "ais" - ], - [ - "gene_synonym", - "ASAP:ABE-0007451" - ], - [ - "gene_synonym", - "pagH" - ], - [ - "gene_synonym", - "GI:16130187" - ], - [ - "gene_synonym", - "NP_416755.1" - ], - [ - "gene_synonym", - "EcoGene:EG13155" - ], - [ - "gene_synonym", - "ECK2245" - ], - [ - "gene_synonym", - "JW2246" - ] - ], - "dna_sequence": "GTGTTAGCTTTTTGCCGCTCTTCGTTGAAGTCAAAAAAATATATCATCATTTTACTGGCGCTCGCTGCAATTGCCGGACTGGGTACTCATGCCGCCTGGAGTAGCAATGGTTTGCCACGTATCGACAATAAAACACTGGCCAGACTGGCACAGCAGCACCCGGTTGTCGTTTTGTTTCGTCATGCTGAACGTTGCGACCGTTCAACCAATCAATGCTTGTCAGATAAAACAGGTATTACGGTTAAAGGTACCCAGGATGCCCGTGAACTGGGCAACGCTTTTAGTGCTGATATCCCTGATTTCGATCTTTATTCCAGTAATACCGTCCGGACCATTCAGTCGGCTACCTGGTTTTCAGCGGGTAAAAAATTGACGGTAGATAAACGACTTCTTCAGTGCGGTAATGAGATTTATAGTGCAATTAAGGACTTACAAAGCAAAGCGCCTGATAAAAATATCGTTATTTTCACCCATAATCATTGCCTGACATATATTGCTAAAGATAAGCGTGACGCGACATTTAAACCTGATTATCTGGATGGTTTAGTCATGCATGTGGAAAAAGGCAAAGTTTATCTGGATGGGGAATTCGTTAACCACTAA", - "dna_sequence_length": 603, - "functions": [ - "putative LPS core heptose(II)-phosphate phosphatase" - ], - "id": "CDS_2236", - "location": [ - [ - "NC_000913", - 2365620, - "-", - 603 - ] - ], - "md5": "d257d4435bdaf37209e5f22c31ddf46e", - "parent_gene": "", - "protein_md5": "4bb4f9c190ba0b1d8f49fc3ca4ee6c46", - "protein_translation": "MLAFCRSSLKSKKYIIILLALAAIAGLGTHAAWSSNGLPRIDNKTLARLAQQHPVVVLFRHAERCDRSTNQCLSDKTGITVKGTQDARELGNAFSADIPDFDLYSSNTVRTIQSATWFSAGKKLTVDKRLLQCGNEIYSAIKDLQSKAPDKNIVIFTHNHCLTYIAKDKRDATFKPDYLDGLVMHVEKGKVYLDGEFVNH", - "protein_translation_length": 200, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5372" - ], - [ - "gene_synonym", - "NP_416756.5" - ], - [ - "gene_synonym", - "pmrH" - ], - [ - "gene_synonym", - "ASAP:ABE-0007456" - ], - [ - "gene_synonym", - "b2253" - ], - [ - "gene_synonym", - "yfbE" - ], - [ - "gene_synonym", - "arnB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77690" - ], - [ - "gene_synonym", - "GI:145698288" - ], - [ - "gene_synonym", - "ECK2246" - ], - [ - "gene_synonym", - "pgbP1" - ], - [ - "gene_synonym", - "GeneID:947375" - ], - [ - "gene_synonym", - "EcoGene:EG14089" - ] - ], - "dna_sequence": "ATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTGGATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAGGGCGATGAAGTGATTACGCCTTCCCTGACCTGGGTTTCAACCCTCAATATGATTTCCTTGTTGGGTGCAACGCCGGTAATGGTGGATGTCGACCGCGATACGCTGATGGTCACGCCTGAAGCTATCGAGTCAGCCATTACGCCACGCACTAAAGCCATCATTCCGGTGCATTATGCCGGTGCGCCAGCAGATATTGACGCCATTCGCGCCATTGGCGAACGTTACGGCATCGCAGTTATCGAAGATGCTGCCCATGCCGTCGGTACGTATTACAAAGGGCGACATATTGGCGCAAAAGGTACCGCTATTTTTTCATTTCATGCCATTAAAAATATTACCTGTGCTGAAGGTGGCCTGATTGTAACTGATAATGAAAACCTTGCCCGCCAGCTACGGATGCTGAAATTTCACGGTCTGGGTGTCGATGCCTATGACAGACAAACCTGGGGCCGTGCACCGCAGGCTGAAGTCTTAACACCGGGCTATAAGTACAATCTGACCGATATTAACGCCGCGATTGCCCTGACACAGTTAGTCAAATTAGAGCACCTCAACACCCGTCGGCGCGAAATTGCCCAGCAATATCAGCAAGCACTGGCAGCTCTCCCCTTTCAGCCATTAAGCCTTCCCGCCTGGCCGCACGTTCACGCCTGGCATCTGTTTATTATTCGTGTCGATGAACAACGTTGTGGTATCAGTCGCGATGCGTTGATGGAAGCGTTAAAAGAAAGAGGCATTGGTACCGGGTTACATTTCCGCGCCGCTCACACACAAAAATATTATCGCGAGCGTTTTCCCACGCTGTCGTTACCGAATACCGAATGGAATAGCGAACGCATCTGTTCTTTGCCGCTGTTCCCGGATATGACTACCGCCGATGCCGACCATGTCATCACAGCCCTTCAGCAACTCGCAGGACAATAA", 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"gene_synonym", - "ORF2" - ], - [ - "gene_synonym", - "b2254" - ], - [ - "gene_synonym", - "pmrF" - ], - [ - "gene_synonym", - "yfbF" - ], - [ - "gene_synonym", - "arnC" - ], - [ - "gene_synonym", - "JW2248" - ], - [ - "gene_synonym", - "GeneID:945275" - ], - [ - "gene_synonym", - "ECK2247" - ], - [ - "gene_synonym", - "GI:16130189" - ], - [ - "gene_synonym", - "EcoGene:EG14090" - ] - ], - "dna_sequence": "ATGTTTGAAATCCACCCTGTTAAGAAAGTCTCGGTGGTTATTCCCGTTTATAACGAGCAGGAAAGCTTACCGGAATTAATCAGGCGCACCACCACAGCCTGTGAATCGTTGGGGAAAGAGTATGAGATCCTGCTGATTGATGACGGCAGTAGCGATAATTCCGCGCATATGCTGGTCGAAGCCTCACAAGCGGAGAACAGCCATATTGTGTCTATTTTGCTTAACCGCAATTACGGGCAACATTCAGCGATTATGGCGGGATTCAGTCACGTTACTGGCGACTTAATTATTACCCTTGATGCCGATCTCCAGAATCCGCCAGAAGAAATCCCCCGCCTGGTGGCAAAAGCCGATGAAGGTTACGACGTGGTAGGGACTGTACGCCAGAACCGCCAGGACAGCTGGTTTCGTAAAACCGCTTCGAAGATGATTAACCGGCTTATTCAGCGCACCACTGGCAAAGCGATGGGTGATTACGGTTGTATGCTGCGCGCCTATCGCCGTCATATTGTCGATGCGATGTTGCACTGCCATGAACGCAGCACCTTTATCCCGATTCTGGCGAATATCTTCGCCCGCCGTGCCATTGAAATTCCAGTACATCATGCCGAGCGTGAGTTTGGTGAATCCAAATACAGTTTTATGCGCCTGATTAATTTGATGTACGACCTGGTGACCTGCCTTACCACAACGCCGCTACGTATGCTGAGTCTGCTCGGCAGCATTATTGCGATTGGAGGTTTTAGCATTGCGGTGCTGCTGGTGATTTTACGCCTGACCTTCGGACCACAATGGGCGGCAGAAGGCGTCTTTATGCTATTTGCCGTGCTGTTTACTTTTATTGGCGCTCAGTTTATCGGCATGGGATTACTCGGTGAATATATCGGCAGGATCTACACCGATGTCCGCGCCCGCCCCCGCTATTTTGTTCAGCAAGTTATCCGTCCATCCAGCAAGGAAAATGAATAA", - "dna_sequence_length": 969, - "functions": [ - "undecaprenyl phosphate-L-Ara4FN transferase" - ], - "id": "CDS_2238", - "location": [ - [ - "NC_000913", - 2367071, - "+", - 969 - ] - ], - "md5": "6e693673769e0871177af2e2fea63c78", - "parent_gene": "", - "protein_md5": "ca3c13477a20e356d3ec6c4cca81c8bc", - "protein_translation": "MFEIHPVKKVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHMLVEASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSWFRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIVDAMLHCHERSTFIPILANIFARRAIEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTTPLRMLSLLGSIIAIGGFSIAVLLVILRLTFGPQWAAEGVFMLFAVLFTFIGAQFIGMGLLGEYIGRIYTDVRARPRYFVQQVIRPSSKENE", - "protein_translation_length": 322, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "pmrI" - ], - [ - "gene_synonym", - "GeneID:947683" - ], - [ - "gene_synonym", - "GI:16130190" - ], - [ - "gene_synonym", - "ASAP:ABE-0007460" - ], - [ - "gene_synonym", - "yfbG" - ], - [ - "gene_synonym", - "arnA" - ], - [ - "gene_synonym", - "b2255" - ], - [ - "gene_synonym", - "NP_416758.1" - ], - [ - "gene_synonym", - "JW2249" - ], - [ - "gene_synonym", - "ECK2248" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77398" - ], - [ - "gene_synonym", - "SAF" - ], - [ - "gene_synonym", - "EcoGene:EG14091" - ], - [ - "gene_synonym", - "pbgP3" - ] - ], - "dna_sequence": "ATGAAAACCGTCGTTTTTGCCTACCACGATATGGGATGCCTCGGTATTGAAGCCCTGCTGGCTGCCGGTTACGAAATTAGCGCCATTTTTACCCATACTGATAATCCCGGTGAAAAAGCCTTTTATGGTTCGGTGGCTCGTCTGGCGGCGGAAAGAGGCATTCCGGTTTATGCGCCGGATAACGTTAATCATCCGCTGTGGGTGGAACGCATTGCCCAACTGTCGCCAGATGTGATTTTCTCTTTTTATTATCGCCATCTTATTTACGACGAAATTTTGCAGCTCGCTCCCGCAGGTGCATTTAATCTGCATGGTTCGCTGTTACCAAAATATCGTGGTCGCGCGCCGCTGAACTGGGTGCTGGTCAACGGTGAAACGGAAACTGGCGTTACATTGCACCGAATGGTGAAACGTGCCGATGCCGGGGCCATTGTGGCGCAACTGCGCATTGCCATTGCGCCAGACGATATCGCTATTACGCTGCATCATAAATTGTGCCATGCCGCGCGCCAGCTACTGGAACAGACATTACCCGCCATTAAACACGGTAATATTCTGGAAATCGCCCAGCGCGAAAACGAAGCCACCTGTTTTGGTCGCAGAACGCCGGATGACAGTTTCCTTGAATGGCATAAACCGGCATCCGTACTGCACAACATGGTACGTGCCGTTGCCGATCCGTGGCCGGGTGCCTTCAGCTATGTTGGCAATCAGAAATTCACCGTCTGGTCGTCGCGTGTTCATCCTCATGCCAGCAAAGCACAGCCGGGGAGCGTGATTTCTGTTGCGCCACTGCTGATTGCCTGTGGCGATGGCGCGCTGGAAATCGTCACCGGACAGGCGGGCGACGGCATTACTATGCAGGGCTCGCAATTAGCGCAGACGCTGGGCCTGGTGCAAGGTTCACGCTTGAATAGCCAGCCTGCCTGCACCGCCCGACGCCGTACCCGGGTACTCATCCTCGGGGTGAATGGCTTTATTGGCAACCATCTGACAGAACGCCTGCTGCGCGAAGATCATTATGAAGTTTACGGTCTGGATATTGGCAGCGATGCGATAAGCCGTTTTCTGAATCATCCGCATTTTCACTTTGTTGAAGGCGATATCAGTATTCATTCCGAATGGATTGAGTATCATGTCAAAAAATGTGATGTCGTCTTGCCGCTGGTGGCGATAGCCACGCCGATTGAATATACCCGCAACCCGCTGCGCGTATTTGAACTCGATTTTGAAGAGAATCTGCGCATTATCCGCTACTGCGTGAAGTACCGTAAGCGAATCATCTTCCCGTCAACTTCAGAAGTTTATGGGATGTGTAGCGATAAATACTTCGATGAGGACCATTCTAATTTAATCGTCGGCCCGGTGAATAAACCACGCTGGATTTATTCGGTATCAAAACAATTACTTGATCGGGTGATCTGGGCCTATGGCGAAAAAGAGGGTTTACAGTTCACCCTCTTCCGCCCGTTTAACTGGATGGGACCACGACTGGATAACCTTAATGCAGCGCGAATTGGCAGCTCCCGCGCTATTACGCAACTCATTCTCAATCTGGTAGAAGGTTCACCGATTAAGCTGATTGATGGCGGAAAACAAAAACGCTGCTTTACTGATATTCGCGATGGTATCGAGGCGTTATACCGCATTATCGAAAATGCGGGAAATCGCTGCGACGGTGAAATTATCAACATTGGCAATCCTGAGAACGAAGCGAGCATTGAGGAACTGGGCGAGATGCTGCTGGCGAGCTTCGAAAAACATCCGCTGCGCCATCATTTCCCACCGTTTGCGGGCTTTCGCGTTGTCGAAAGTAGCAGCTACTACGGCAAAGGATATCAGGACGTAGAGCATCGTAAACCGAGCATCCGCAATGCCCACCGCTGCCTGGACTGGGAGCCGAAAATTGATATGCAGGAAACCATCGACGAAACGCTGGATTTCTTCCTGCGCACCGTTGATCTTACGGATAAACCATCATGA", - "dna_sequence_length": 1983, - "functions": [ - "fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase" - ], - "id": "CDS_2239", - "location": [ - [ - "NC_000913", - 2368039, - "+", - 1983 - ] - ], - "md5": "8e84184263df6819bcf77632b344e4cb", - "parent_gene": "", - "protein_md5": "01fa82bf61c0f15e0e2df18b7115ea2a", - "protein_translation": "MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVGNQKFTVWSSRVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQTLGLVQGSRLNSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDKPS", - "protein_translation_length": 660, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "pmrJ" - ], - [ - "gene_synonym", - "yfbH" - ], - [ - "gene_synonym", - "GeneID:945334" - ], - [ - "gene_synonym", - "ASAP:ABE-0007462" - ], - [ - "gene_synonym", - "GI:16130191" - ], - [ - "gene_synonym", - "b2256" - ], - [ - "gene_synonym", - "NP_416759.1" - ], - [ - "gene_synonym", - "ECK2249" - ], - [ - "gene_synonym", - "arnD" - ], - [ - "gene_synonym", - "pbgP4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76472" - ], - [ - "gene_synonym", - "JW2250" - ], - [ - "gene_synonym", - "EcoGene:EG14092" - ] - ], - "dna_sequence": "ATGACCAAAGTAGGCTTACGCATTGATGTCGATACCTTTCGTGGCACCCGTGAAGGCGTGCCGCGTCTGCTGGAAATCTTGAGTAAGCATAATATTCAGGCCAGCATTTTTTTCAGCGTCGGCCCGGACAATATGGGCCGCCATCTCTGGCGACTGGTGAAGCCACAGTTTTTGTGGAAGATGCTGCGCTCAAACGCGGCATCGCTTTATGGCTGGGATATTTTACTGGCAGGTACGGCCTGGCCAGGTAAAGAGATTGGTCATGCCAATGCCGATATCATTCGTGAAGCGGCTAAACATCACGAAGTCGGCCTGCACGCCTGGGATCACCATGCCTGGCAAGCCCGTAGCGGTAACTGGGATCGGCAAACAATGATCGACGATATTGCACGCGGTCTTCGCACTCTGGAAGAGATTATCGGTCAACCGGTAACCTGTTCTGCCGCTGCGGGCTGGCGTGCCGACCAGAAGGTGATCGAAGCAAAAGAAGCGTTCCATTTGCGCTACAACAGCGATTGTCGTGGGGCCATGCCGTTCCGTCCATTGCTCGAATCAGGAAACCCTGGCACTGCGCAAATTCCGGTGACCTTACCCACCTGGGATGAAGTGATTGGTCGGGATGTGAAAGCAGAAGATTTTAACGGTTGGTTACTCAACCGCATCCTGCGAGATAAAGGCACGCCGGTTTATACCATTCATGCAGAAGTTGAAGGCTGCGCTTATCAGCATAATTTTGTGGATCTCCTCAAACGCGCAGCTCAGGAAGGCGTGACATTTTGCCCTTTAAGCGAACTGTTATCAGAGACGTTGCCGCTCGGACAAGTTGTTCGCGGAAATATTGCCGGACGTGAAGGCTGGCTGGGTTGCCAACAAATTGCGGGTAGTCGCTGA", - "dna_sequence_length": 891, - "functions": [ - "undecaprenyl phosphate-alpha-L-ara4FN deformylase" - ], - "id": "CDS_2240", - "location": [ - [ - "NC_000913", - 2370018, - "+", - 891 - ] - ], - "md5": "c23dfeb2d8d01a9a6bfe4febf303748b", - "parent_gene": "", - "protein_md5": "00eab6701f3f824f58a08890feb2529e", - "protein_translation": "MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDNMGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHEVGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIEAKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLLNRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVVRGNIAGREGWLGCQQIAGSR", - "protein_translation_length": 296, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "pmrK" - ], - [ - "gene_synonym", - "pqaB" - ], - [ - "gene_synonym", - "yfbI" - ], - [ - "gene_synonym", - "GeneID:947297" - ], - [ - "gene_synonym", - "arnT" - ], - [ - "gene_synonym", - "GI:16130192" - ], - [ - "gene_synonym", - "NP_416760.1" - ], - [ - "gene_synonym", - "b2257" - ], - [ - "gene_synonym", - "pbgE1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76473" - ], - [ - "gene_synonym", - "ASAP:ABE-0007464" - ], - [ - "gene_synonym", - "EcoGene:EG14093" - ], - [ - "gene_synonym", - "JW2251" - ], - [ - "gene_synonym", - "ECK2250" - ] - ], - "dna_sequence": "ATGAAATCGGTACGTTACCTTATCGGCCTCTTCGCGTTTATTGCCTGCTATTACCTGTTACCGATCAGCACGCGTCTGCTCTGGCAACCCGATGAAACGCGTTATGCGGAAATCAGTCGAGAAATGCTGGCATCCGGCGACTGGATTGTGCCCCATCTGTTAGGGCTACGTTATTTCGAAAAACCCATTGCCGGATACTGGATTAACAGCATTGGGCAATGGCTATTTGGCGCGAATAACTTTGGTGTGCGGGCAGGCGTTATCTTTGCGACCCTGTTAACTGCCGCGCTGGTGACCTGGTTTACTCTGCGCTTATGGCGCGATAAACGTCTGGCTCTACTCGCCACAGTAATTTATCTCTCATTGTTTATTGTCTATGCCATCGGCACTTATGCCGTGCTCGATCCGTTTATTGCATTCTGGCTGGTGGCGGGAATGTGCAGCTTCTGGCTGGCAATGCAGGCACAGACGTGGAAAGGCAAAAGCGCAGGATTTTTACTGCTGGGAATCACCTGCGGCATGGGGGTGATGACCAAAGGTTTTCTCGCCCTTGCCGTGCCGGTATTAAGCGTGCTGCCATGGGTAGCGACGCAAAAACGCTGGAAAGATCTCTTTATTTACGGCTGGCTGGCGGTTATCAGTTGCGTACTGACGGTTCTCCCTTGGGGACTGGCGATAGCGCAGCGGGAGCCTAACTTCTGGCACTATTTTTTCTGGGTTGAGCATATTCAACGCTTTGCACTGGATGATGCCCAACATAGAGCTCCGTTCTGGTACTACGTGCCGGTCATCATTGCCGGTAGCCTGCCGTGGCTGGGATTACTCCCCGGTGCACTGTACACAGGCTGGAAAAACCGCAAGCATTCCGCAACCGTCTATTTGTTGAGCTGGACGATAATGCCGCTGCTGTTTTTCTCCGTCGCTAAAGGTAAATTGCCCACCTATATTCTTTCCTGCTTTGCATCTCTGGCAATGCTGATGGCGCATTACGCTTTGCTGGCAGCAAAAAATAATCCTCTGGCGCTGCGGATTAATGGCTGGATTAACATCGCTTTTGGCGTCACTGGCATTATTGCCACATTTGTGGTCTCCCCGTGGGGACCAATGAACACGCCGGTGTGGCAAACCTTCGAGAGCTATAAAGTCTTTTGTGCCTGGTCGATTTTTTCGCTATGGGCATTTTTCGGCTGGTACACCTTAACAAACGTCGAAAAGACCTGGCCTTTTGCCGCGCTTTGCCCGCTGGGGCTGGCGTTGCTGGTAGGATTTTCAATTCCTGACAGAGTTATGGAAGGAAAACATCCGCAATTTTTTGTCGAGATGACACAAGAATCACTTCAGCCAAGCCGCTATATTCTTACTGATAGCGTCGGTGTTGCCGCAGGTCTGGCATGGAGCCTGCAACGCGATGACATCATCATGTATCGCCAGACAGGTGAGTTGAAATACGGCCTTAATTATCCGGATGCGAAAGGGAGATTTGTCAGCGGTGATGAGTTCGCAAACTGGCTTAATCAACATCGTCAGGAGGGGATTATTACTCTCGTGCTTTCGGTTGACCGCGATGAAGATATCAACAGTCTCGCCATTCCGCCCGCAGATGCCATCGATCGTCAGGAGCGTCTGGTGCTGATTCAGTATCGTCCCAAATGA", - "dna_sequence_length": 1653, - "functions": [ - "4-amino-4-deoxy-L-arabinose transferase" - ], - "id": "CDS_2241", - "location": [ - [ - "NC_000913", - 2370908, - "+", - 1653 - ] - ], - "md5": "2d518380e941b6066bdccb77a00789e4", - "parent_gene": "", - "protein_md5": "fc4161486748f714f30626d6eb08c7ec", - "protein_translation": "MKSVRYLIGLFAFIACYYLLPISTRLLWQPDETRYAEISREMLASGDWIVPHLLGLRYFEKPIAGYWINSIGQWLFGANNFGVRAGVIFATLLTAALVTWFTLRLWRDKRLALLATVIYLSLFIVYAIGTYAVLDPFIAFWLVAGMCSFWLAMQAQTWKGKSAGFLLLGITCGMGVMTKGFLALAVPVLSVLPWVATQKRWKDLFIYGWLAVISCVLTVLPWGLAIAQREPNFWHYFFWVEHIQRFALDDAQHRAPFWYYVPVIIAGSLPWLGLLPGALYTGWKNRKHSATVYLLSWTIMPLLFFSVAKGKLPTYILSCFASLAMLMAHYALLAAKNNPLALRINGWINIAFGVTGIIATFVVSPWGPMNTPVWQTFESYKVFCAWSIFSLWAFFGWYTLTNVEKTWPFAALCPLGLALLVGFSIPDRVMEGKHPQFFVEMTQESLQPSRYILTDSVGVAAGLAWSLQRDDIIMYRQTGELKYGLNYPDAKGRFVSGDEFANWLNQHRQEGIITLVLSVDRDEDINSLAIPPADAIDRQERLVLIQYRPK", - "protein_translation_length": 550, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:1450282" - ], - [ - "gene_synonym", - "ASAP:ABE-0285065" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47377" - ], - [ - "gene_synonym", - "b4544" - ], - [ - "gene_synonym", - "pmrL" - ], - [ - "gene_synonym", - "YP_588462.1" - ], - [ - "gene_synonym", - "ECK2251" - ], - [ - "gene_synonym", - "pbgE2" - ], - [ - "gene_synonym", - "arnE" - ], - [ - "gene_synonym", - "EcoGene:EG14344" - ], - [ - "gene_synonym", - "yfbW" - ], - [ - "gene_synonym", - "JW2252" - ], - [ - "gene_synonym", - "GI:94541119" - ] - ], - "dna_sequence": "ATGATCTGGCTAACATTAGTCTTTGCCAGCTTGCTTAGCGTTGCCGGGCAGTTGTGTCAGAAACAGGCAACCTGCTTTGTGGCGATAAACAAACGGCGCAAACATATCGTGCTGTGGCTGGGACTGGCGCTGGCTTGTCTTGGTCTTGCCATGGTGCTCTGGCTGCTGGTCTTGCAGAACGTACCGGTAGGCATTGCTTACCCGATGTTAAGTCTGAATTTTGTCTGGGTGACGCTGGCTGCAGTAAAACTGTGGCACGAACCGGTATCGCCGCGTCACTGGTGTGGGGTGGCGTTCATTATTGGCGGCATTGTGATCCTCGGGAGTACGGTGTAA", - "dna_sequence_length": 336, - "functions": [ - "undecaprenyl phosphate-alpha-L-ara4N exporter", - "flippase ArnEF subunit" - ], - "id": "CDS_2242", - "location": [ - [ - "NC_000913", - 2372557, - "+", - 336 - ] - ], - "md5": "ab44810610228394d7da77f0f73299b0", - "parent_gene": "", - "protein_md5": "2ceb787818d4a72477ec32d5f728d3fb", - "protein_translation": "MIWLTLVFASLLSVAGQLCQKQATCFVAINKRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGSTV", - "protein_translation_length": 111, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2258" - ], - [ - "gene_synonym", - "JW5373" - ], - [ - "gene_synonym", - "GI:90111409" - ], - [ - "gene_synonym", - "pmrM" - ], - [ - "gene_synonym", - "yfbJ" - ], - [ - "gene_synonym", - "NP_416761.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0007466" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76474" - ], - [ - "gene_synonym", - "pbgE3" - ], - [ - "gene_synonym", - "arnF" - ], - [ - "gene_synonym", - "GeneID:945344" - ], - [ - "gene_synonym", - "EcoGene:EG14094" - ], - [ - "gene_synonym", - "ECK2252" - ] - ], - "dna_sequence": "ATGGGCCTGATGTGGGGATTATTCAGCGTCATTATTGCCTCAGTTGCGCAATTAAGCCTGGGTTTTGCGGCGAGTCATCTGCCGCCGATGACGCACTTATGGGATTTTATCGCGGCTCTGTTAGCTTTTGGCCTGGATGCCCGGATACTGTTACTCGGGCTGCTGGGTTATCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTTCATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTCAGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACTGGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGA", - "dna_sequence_length": 387, - "functions": [ - "undecaprenyl phosphate-alpha-L-ara4N exporter", - "flippase ArnEF subunit" - ], - "id": "CDS_2243", - "location": [ - [ - "NC_000913", - 2372892, - "+", - 387 - ] - ], - "md5": "22ae9af608f2953e6e1d82380287b7ea", - "parent_gene": "", - "protein_md5": "b8269084c70eea2a37aaa7afde26adf0", - "protein_translation": "MGLMWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY", - "protein_translation_length": 128, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2259" - ], - [ - "gene_synonym", - "ASAP:ABE-0007468" - ], - [ - "gene_synonym", - "EcoGene:EG12671" - ], - [ - "gene_synonym", - "GI:90111410" - ], - [ - "gene_synonym", - "GeneID:945130" - ], - [ - "gene_synonym", - "pmrD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37590" - ], - [ - "gene_synonym", - "JW2254" - ], - [ - "gene_synonym", - "NP_416762.2" - ], - [ - "gene_synonym", - "ECK2253" - ] - ], - "dna_sequence": "ATGGAATGGCTGGTCAAAAAATCGTGCTGCAATAAACAAGATAACAGACATGTACTTATGCTCTGCGATGCTGGCGGCGCGATAAAAATGATCGCCGAAGTGAAGAGTGACTTCGCCGTGAAAGTGGGGGATTTACTCTCGCCTTTGCAGAATGCGCTTTATTGTATTAATCGTGAAAAGCTGCATACGGTGAAAGTCCTCTCGGCAAGCAGTTATAGCCCCGATGAGTGGGAACGGCAGTGTAAAGTGGCAGGGAAAACTCAGTAA", - "dna_sequence_length": 267, - "functions": [ - "inactive two-component system connector protein" - ], - "id": "CDS_2244", - "location": [ - [ - "NC_000913", - 2373538, - "-", - 267 - ] - ], - "md5": "a8f601af4c17a2b6c8a53b5bfdf7a3e3", - "parent_gene": "", - "protein_md5": "22f73f32dce657aba511b0ead2d927a8", - "protein_translation": "MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCKVAGKTQ", - "protein_translation_length": 88, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946741" - ], - [ - "gene_synonym", - "b2260" - ], - [ - "gene_synonym", - "EcoGene:EG12437" - ], - [ - "gene_synonym", - "ASAP:ABE-0007471" - ], - [ - "gene_synonym", - "GI:16130195" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37353" - ], - [ - "gene_synonym", - "JW2255" - ], - [ - "gene_synonym", - "menE" - ], - [ - "gene_synonym", - "ECK2254" - ], - [ - "gene_synonym", - "NP_416763.1" - ] - ], - "dna_sequence": "ATGATCTTCTCTGACTGGCCGTGGCGTCACTGGCGGCAAGTGCGGGGAGAAACCATCGCCTTACGTCTTAATGACGAGCAACTCAACTGGCGCGAGCTTTGTGCTCGCGTCGATGAATTAGCCTCCGGATTTGCGGTGCAGGGGGTGGTTGAGGGCAGCGGCGTGATGTTGCGGGCGTGGAATACGCCGCAAACGCTGCTCGCCTGGCTGGCGTTACTGCAATGCGGGGCGCGGGTGTTGCCCGTGAACCCTCAGCTGCCGCAACCGTTGCTTGAAGAATTGCTGCCCAATCTGACGCTGCAATTTGCTCTGGTGCCGGATGGGGAAAACACGTTTCCGGCATTAACGTCGCTGCACATTCAGCTGGTTGAAGGCGCACATGCCGCTACGTGGCAGCCGACGCGTCTGTGCTCAATGACGTTGACCTCGGGTTCTACCGGTTTGCCGAAAGCCGCTGTCCATACTTATCAGGCCCATCTTGCCAGTGCGCAAGGTGTGTTATCGCTGATTCCGTTTGGCGATCACGATGATTGGTTGCTCTCTTTACCGCTGTTTCACGTCTCCGGTCAGGGAATTATGTGGCGCTGGTTATACGCTGGTGCGCGGATGACGGTACGTGATAAACAGCCATTGGAGCAAATGCTGGCAGGCTGTACTCACGCTTCACTGGTGCCAACACAACTCTGGCGTTTGCTGGTTAACCGTAGTTCCGTTTCCCTGAAAGCGGTGTTACTTGGCGGCGCGGCTATCCCGGTCGAGTTGACGGAACAGGCGCGCGAGCAGGGGATTCGTTGCTTTTGCGGCTATGGTCTGACCGAGTTTGCCTCCACGGTGTGTGCGAAAGAAGCCGACGGCCTGGCAGACGTTGGTTCGCCGCTGCCGGGTCGGGAAGTGAAAATCGTTAATAATGAAGTGTGGCTGCGGGCTGCCAGTATGGCAGAAGGTTACTGGCGTAACGGGCAACTGGTTTCACTGGTTAATGACGAAGGCTGGTACGCTACGCGCGATCGCGGTGAGATGCATAATGGCAAGCTGACCATTGTCGGACGTTTAGACAATCTATTCTTCAGTGGCGGAGAGGGTATTCAGCCGGAAGAAGTCGAGCGCGTAATTGCTGCACATCCTGCGGTTTTGCAGGTGTTTATCGTCCCCGTTGCCGACAAGGAGTTTGGTCATCGACCGGTGGCGGTGATGGAGTATGACCACGAGAGCGTTGATCTTAGTGAATGGGTGAAAGATAAGCTGGCCCGTTTTCAACAACCGGTGCGCTGGCTAACTCTGCCGCCGGAGCTGAAAAACGGCGGTATTAAAATTTCACGTCAGGCGCTAAAAGAGTGGGTGCAACGTCAGCAATAA", 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"gene_synonym", - "GI:16130196" - ], - [ - "gene_synonym", - "NP_416764.1" - ], - [ - "gene_synonym", - "EcoGene:EG11532" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P29208" - ], - [ - "gene_synonym", - "ECK2255" - ], - [ - "gene_synonym", - "JW2256" - ], - [ - "gene_synonym", - "menC" - ] - ], - "dna_sequence": "ATGCGTAGCGCGCAGGTATACCGCTGGCAGATCCCCATGGACGCGGGGGTGGTTCTGCGCGACAGGCGGTTAAAAACCCGCGACGGGCTGTATGTTTGCCTGCGTGAAGGCGAGCGCGAAGGGTGGGGGGAGATCTCCCCACTGCCGGGCTTCAGTCAGGAAACCTGGGAAGAGGCGCAAAGTGTGCTGCTTGCCTGGGTAAATAACTGGCTGGCAGGCGATTGCGAGCTACCGCAGATGCCTTCCGTGGCCTTTGGCGTAAGCTGTGCATTGGCAGAACTGACAGATACGTTGCCGCAAGCAGCCAACTACCGTGCGGCACCGCTGTGTAATGGCGATCCGGACGATCTGATCCTCAAACTTGCAGATATGCCAGGCGAGAAAGTGGCGAAGGTCAAAGTGGGATTGTACGAAGCGGTGCGCGACGGCATGGTGGTGAATCTGTTGCTGGAGGCAATTCCGGATCTGCATTTGCGTCTTGACGCAAATCGCGCCTGGACACCGCTGAAAGGTCAGCAGTTTGCCAAATACGTTAACCCGGATTATCGCGACCGCATCGCGTTTCTCGAAGAGCCGTGCAAAACCCGCGATGATTCGCGAGCGTTTGCCCGTGAAACCGGCATTGCCATTGCCTGGGATGAAAGCCTGCGCGAGCCGGATTTTGCCTTTGTGGCTGAAGAGGGCGTGCGCGCGGTAGTTATCAAACCCACGCTCACGGGCAGTCTGGAAAAAGTACGCGAGCAGGTACAGGCGGCGCACGCGCTGGGGCTGACGGCGGTGATCAGTTCTTCCATTGAATCGAGCTTAGGCTTAACGCAACTGGCGCGGATTGCCGCCTGGTTAACGCCGGACACCATTCCAGGGCTGGACACGCTGGATCTGATGCAGGCGCAGCAGGTACGTCGCTGGCCGGGTAGCACGCTGCCTGTCGTGGAAGTTGATGCACTGGAGCGGTTGTTATGA", - "dna_sequence_length": 963, - "functions": [ - "O-succinylbenzoyl-CoA synthase" - ], - "id": "CDS_2246", - "location": [ - [ - "NC_000913", - 2375962, - "-", - 963 - ] - ], - "md5": "e90c5d388f4a44e4960b8900b85b8e95", - "parent_gene": "", - "protein_md5": "1fe0536e9c677f73701f2ab2f32fd868", - "protein_translation": "MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGEISPLPGFSQETWEEAQSVLLAWVNNWLAGDCELPQMPSVAFGVSCALAELTDTLPQAANYRAAPLCNGDPDDLILKLADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRLDANRAWTPLKGQQFAKYVNPDYRDRIAFLEEPCKTRDDSRAFARETGIAIAWDESLREPDFAFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALGLTAVISSSIESSLGLTQLARIAAWLTPDTIPGLDTLDLMQAQQVRRWPGSTLPVVEVDALERLL", - "protein_translation_length": 320, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416765.1" - ], - [ - "gene_synonym", - "b2262" - ], - [ - "gene_synonym", - "GeneID:946747" - ], - [ - "gene_synonym", - "GI:16130197" - ], - [ - "gene_synonym", - "ASAP:ABE-0007476" - ], - [ - "gene_synonym", - "EcoGene:EG11368" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABU0" - ], - [ - "gene_synonym", - "ECK2256" - ], - [ - "gene_synonym", - "JW2257" - ], - [ - "gene_synonym", - "menB" - ] - ], - "dna_sequence": "ATGATTTATCCTGATGAAGCAATGCTTTACGCACCGGTTGAATGGCACGACTGCTCCGAAGGTTTCGAGGACATTCGTTATGAAAAATCCACCGACGGTATCGCAAAAATCACCATTAATCGTCCGCAGGTGCGCAATGCCTTCCGTCCTCTGACGGTAAAAGAGATGATCCAGGCGCTGGCAGATGCGCGTTATGACGACAACATCGGCGTGATCATTCTGACTGGTGCAGGCGATAAAGCGTTCTGCTCCGGTGGTGACCAGAAAGTGCGTGGTGATTACGGCGGCTATAAAGATGATTCCGGCGTACATCACCTGAATGTGCTGGACTTCCAGCGTCAGATCCGTACCTGTCCGAAACCGGTTGTCGCGATGGTGGCTGGCTACTCCATCGGCGGCGGTCACGTTCTGCACATGATGTGCGACCTGACTATCGCGGCAGATAATGCCATCTTCGGTCAGACTGGCCCGAAAGTCGGTTCCTTCGACGGCGGCTGGGGCGCTTCCTACATGGCTCGCATCGTCGGGCAGAAAAAAGCGCGTGAAATCTGGTTCCTGTGCCGTCAGTACGACGCAAAACAGGCGCTGGATATGGGCCTTGTGAACACCGTGGTACCGCTGGCGGATCTGGAAAAAGAAACCGTCCGTTGGTGCCGCGAAATGCTGCAAAACAGCCCGATGGCGCTGCGCTGCCTGAAAGCTGCACTGAACGCCGACTGTGACGGGCAGGCGGGGCTGCAGGAGCTGGCGGGCAACGCCACCATGCTGTTCTACATGACGGAAGAAGGTCAGGAAGGTCGCAACGCCTTCAACCAGAAACGTCAGCCTGACTTCAGCAAATTCAAACGGAATCCGTAA", - "dna_sequence_length": 858, - "functions": [ - "dihydroxynaphthoic acid synthetase" - ], - "id": "CDS_2247", - "location": [ - [ - "NC_000913", - 2376819, - "-", - 858 - ] - ], - "md5": "93d3fbda9664c60a0e2725ff5de0dd6a", - "parent_gene": "", - "protein_md5": "fee40d4ca185e3eaf50add88f5e77e13", - "protein_translation": "MIYPDEAMLYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP", - "protein_translation_length": 285, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007478" - ], - [ - "gene_synonym", - "b2263" - ], - [ - "gene_synonym", - "EcoGene:EG12438" - ], - [ - "gene_synonym", - "yfbB" - ], - [ - "gene_synonym", - "GI:16130198" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37355" - ], - [ - "gene_synonym", - "JW2258" - ], - [ - "gene_synonym", - "ECK2257" - ], - [ - "gene_synonym", - "menH" - ], - [ - "gene_synonym", - "NP_416766.1" - ], - [ - "gene_synonym", - "GeneID:946736" - ] - ], - "dna_sequence": "ATGATCCTGCACGCGCAGGCAAAACACGGAAAACCAGGTTTACCCTGGCTGGTGTTTTTGCACGGTTTTTCCGGCGATTGCCACGAATGGCAAGAAGTGGGCGAGGCGTTTGCCGACTACTCACGGTTGTATGTTGATCTCCCAGGTCACGGTGGTTCGGCGGCGATTAGCGTCGATGGATTTGATGATGTCACCGACTTACTGCGTAAAACCTTGGTTAGTTACAACATCCTTGACTTCTGGCTGGTGGGGTACTCGCTTGGTGGACGGGTGGCGATGATGGCGGCTTGCCAGGGGCTGGCGGGGCTTTGTGGGGTTATTGTCGAAGGCGGGCATCCGGGGCTGCAAAATGCTGAACAACGTGCGGAACGTCAGCGTTCCGATCGCCAATGGGTGCAGCGTTTTCTCACAGAACCGTTAACGGCGGTATTTGCCGACTGGTATCAACAGCCTGTTTTTGCCTCACTCAATGACGATCAACGCCGGGAGCTGGTGGCGCTGCGCAGCAACAATAATGGCGCAACGCTTGCCGCCATGCTGGAGGCGACTTCTCTCGCCGTCCAGCCTGATTTACGTGCTAACCTTAGCGCCCGCACATTTGCGTTTTATTATTTATGTGGTGAACGTGACAGCAAATTCCGCGCCCTGGCGGCGGAACTGGCTGCCGACTGCCATGTCATTCCTCGCGCCGGACATAACGCGCATCGGGAAAATCCCGCTGGCGTAATCGCAAGTCTGGCGCAGATCTTGCGTTTCTGA", - "dna_sequence_length": 759, - "functions": [ - "2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase" - ], - "id": "CDS_2248", - "location": [ - [ - "NC_000913", - 2377592, - "-", - 759 - ] - ], - "md5": "6cad3a54d0ad555cc5e2f03a525e021c", - "parent_gene": "", - "protein_md5": "b2e52db3e32ed6c1dfc3a976d3e128af", - "protein_translation": "MILHAQAKHGKPGLPWLVFLHGFSGDCHEWQEVGEAFADYSRLYVDLPGHGGSAAISVDGFDDVTDLLRKTLVSYNILDFWLVGYSLGGRVAMMAACQGLAGLCGVIVEGGHPGLQNAEQRAERQRSDRQWVQRFLTEPLTAVFADWYQQPVFASLNDDQRRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAAELAADCHVIPRAGHNAHRENPAGVIASLAQILRF", - "protein_translation_length": 252, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130199" - ], - [ - "gene_synonym", - "b2264" - ], - [ - "gene_synonym", - "JW5374" - ], - [ - "gene_synonym", - "ASAP:ABE-0007482" - ], - [ - "gene_synonym", - "GeneID:946720" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17109" - ], - [ - "gene_synonym", - "NP_416767.1" - ], - [ - "gene_synonym", - "ECK2258" - ], - [ - "gene_synonym", - "menD" - ], - [ - "gene_synonym", - "EcoGene:EG10579" - ] - ], - "dna_sequence": "ATGTCAGTAAGCGCATTTAACCGACGCTGGGCGGCGGTCATTCTGGAAGCATTAACGCGTCACGGCGTCAGACACATCTGTATCGCCCCAGGCTCGCGTTCTACACCGTTAACGTTAGCGGCGGCGGAGAATTCCGCATTCATTCACCACACCCATTTCGATGAGCGTGGGTTGGGGCATCTGGCGCTGGGGCTGGCGAAAGTCAGCAAGCAGCCGGTGGCGGTGATTGTGACCTCCGGCACGGCGGTGGCAAATCTCTATCCGGCACTGATTGAAGCCGGGTTAACCGGAGAAAAACTGATTCTCTTAACCGCCGATCGCCCGCCGGAGCTAATTGACTGCGGCGCGAATCAGGCAATTCGCCAGCCGGGAATGTTCGCCTCTCACCCCACGCACAGTATTTCATTGCCGCGCCCGACCCAGGATATCCCCGCACGTTGGCTGGTTTCTACCATCGACCACGCTCTCGGTACGCTTCATGCGGGGGGAGTCCATATCAACTGCCCGTTTGCTGAACCGCTGTATGGCGAAATGGACGATACCGGGCTTAGCTGGCAACAGCGTCTGGGTGACTGGTGGCAGGACGACAAACCGTGGCTGCGTGAAGCGCCTCGTCTGGAAAGTGAAAAACAGCGCGACTGGTTCTTCTGGCGACAAAAGCGCGGCGTGGTGGTTGCCGGGCGCATGAGTGCGGAAGAGGGCAAAAAAGTTGCCCTGTGGGCGCAAACTCTTGGCTGGCCGCTGATTGGCGATGTGCTGTCACAAACCGGGCAGCCGCTGCCGTGTGCCGATCTTTGGTTAGGCAATGCCAAAGCGACCAGCGAGCTGCAGCAGGCGCAAATTGTGGTGCAACTGGGAAGCAGCCTGACGGGGAAACGGCTCCTGCAATGGCAGGCAAGCTGTGAACCAGAAGAGTACTGGATTGTTGATGACATTGAAGGGCGACTTGATCCGGCACACCATCGCGGACGTCGCTTAATTGCCAATATTGCCGACTGGCTGGAGCTGCATCCGGCAGAAAAACGCCAGCCCTGGTGCGTTGAAATCCCGCGCCTGGCGGAACAGGCAATGCAGGCGGTTATTGCCCGCCGTGATGCGTTTGGCGAAGCGCAACTGGCGCATCGCATCTGCGACTATCTGCCTGAACAGGGGCAATTGTTTGTTGGTAACAGCCTGGTGGTACGTCTGATTGATGCGCTTTCGCAACTTCCGGCAGGTTACCCGGTGTACAGCAACCGTGGGGCCAGCGGTATCGACGGGCTGCTTTCGACCGCCGCCGGCGTTCAGCGGGCAAGCGGCAAACCGACGCTGGCGATTGTGGGCGATCTCTCCGCACTTTACGATCTCAACGCGCTGGCGTTATTGCGTCAGGTTTCTGCGCCGCTGGTATTAATTGTGGTGAACAACAACGGCGGGCAAATTTTCTCGCTGTTGCCAACGCCGCAAAGCGAGCGTGAGCGTTTCTATCTGATGCCGCAAAACGTCCATTTTGAGCACGCCGCCGCGATGTTCGAGCTGAAATATCATCGTCCGCAAAACTGGCAGGAACTTGAAACGGCATTTGCCGACGCCTGGCGCACGCCAACCACCACGGTGATTGAAATGGTGGTTAACGACACCGATGGTGCGCAAACGCTCCAGCAACTTCTGGCGCAGGTAAGCCATTTATGA", 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}, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007485" - ], - [ - "gene_synonym", - "b2265" - ], - [ - "gene_synonym", - "ECK2259" - ], - [ - "gene_synonym", - "EcoGene:EG12362" - ], - [ - "gene_synonym", - "GI:90111411" - ], - [ - "gene_synonym", - "yfbA" - ], - [ - "gene_synonym", - "GeneID:946712" - ], - [ - "gene_synonym", - "JW2260" - ], - [ - "gene_synonym", - "NP_416768.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38051" - ], - [ - "gene_synonym", - "menF" - ] - ], - "dna_sequence": "GTGCAATCACTTACTACGGCGCTGGAAAATCTACTGCGCCATTTGTCGCAAGAGATTCCGGCGACACCCGGCATTCGGGTTATCGATATTCCTTTCCCTCTCAAAGACGCTTTTGATGCCTTGAGCTGGCTGGCCAGTCAGCAAACATACCCGCAATTCTACTGGCAACAACGTAATGGTGATGAAGAAGCTGTCGTCCTGGGCGCGATTACCCGTTTTACGTCGTTGGACCAGGCACAACGTTTTCTTCGCCAGCACCCGGAACACGCCGACTTACGCATTTGGGGGCTGAATGCTTTTGACCCGTCGCAGGGCAATTTACTTTTACCCCGCCTGGAATGGCGACGCTGTGGCGGTAAAGCCACGCTGCGGCTGACGCTATTCAGCGAAAGCTCCCTTCAGCACGATGCGATTCAGGCAAAAGAATTTATCGCCACACTGGTGAGTATCAAGCCCTTGCCTGGGTTACATTTAACCACCACGCGAGAACAACACTGGCCGGACAAAACGGGCTGGACGCAATTAATCGAACTGGCAACGAAAACCATCGCCGAAGGTGAGCTCGACAAAGTGGTGCTCGCTCGGGCAACTGACCTGCATTTCGCAAGTCCGGTCAACGCGGCGGCGATGATGGCTGCCAGTCGTCGACTGAATCTGAATTGCTACCATTTTTACATGGCCTTTGATGGCGAAAATGCTTTTCTTGGCTCTTCACCGGAACGGTTATGGCGGCGGCGTGACAAAGCGCTGCGTACTGAAGCGCTGGCGGGAACAGTAGCAAATAATCCTGATGATAAGCAGGCGCAGCAGTTAGGAGAGTGGCTGATGGCGGATGATAAAAACCAGCGCGAGAACATGCTGGTGGTGGAAGATATCTGTCAACGATTACAGGCCGATACCCAGACGCTGGATGTTTTACCGCCGCAGGTACTGCGTCTGCGTAAAGTGCAGCATCTTCGCCGCTGTATCTGGACTTCACTCAACAAAGCGGATGATGTGATCTGTTTACATCAGTTGCAGCCAACGGCAGCAGTTGCTGGCTTACCGCGCGATCTGGCGCGACAGTTTATCGCCCGTCACGAACCGTTCACCCGAGAATGGTACGCCGGTTCTGCGGGCTATCTCTCATTACAACAAAGCGAATTCTGCGTTTCCCTGCGCTCAGCAAAAATTAGCGGCAATGTCGTGCGATTATATGCTGGCGCGGGCATTGTCCGTGGTTCCGACCCCGAGCAAGAGTGGCAGGAAATCGACAACAAAGCGGCAGGGCTGCGTACTTTATTACAAATGGAATAG", 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- "gene_synonym", - "EcoGene:EG13185" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEH5" - ], - [ - "gene_synonym", - "yfbD" - ], - [ - "gene_synonym", - "JW2261" - ], - [ - "gene_synonym", - "NP_416769.1" - ], - [ - "gene_synonym", - "GI:16130201" - ], - [ - "gene_synonym", - "elaB" - ] - ], - "dna_sequence": "ATGTCTAATCAGTTTGGTGATACACGTATCGATGACGACCTGACGCTGCTTAGTGAAACACTGGAAGAGGTGCTCCGCTCCTCTGGCGATCCCGCCGATCAGAAATATGTTGAGCTGAAAGCGCGTGCAGAAAAAGCGCTGGATGATGTGAAAAAACGGGTTAGCCAGGCTTCAGACAGTTATTACTATCGGGCGAAGCAGGCAGTTTATCGTGCTGATGACTACGTCCACGAAAAACCCTGGCAAGGAATTGGTGTGGGCGCGGCCGTTGGGCTGGTACTAGGACTGTTGCTGGCACGCCGTTAA", - "dna_sequence_length": 306, - "functions": [ - "putative membrane-anchored DUF883 family ribosome-binding protein" - ], - "id": "CDS_2251", - "location": [ - [ - "NC_000913", - 2381027, - "-", - 306 - ] - ], - "md5": "a304e0814059b08dbcc961704fc74685", - "parent_gene": "", - "protein_md5": "00926371a557641dc94145ad2fafee4b", - "protein_translation": "MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAEKALDDVKKRVSQASDSYYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR", - "protein_translation_length": 101, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946750" - ], - [ - "gene_synonym", - "b2267" - ], - [ - "gene_synonym", - "ECK2261" - ], - [ - "gene_synonym", - "yfbC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEH3" - ], - [ - "gene_synonym", - "ASAP:ABE-0007489" - ], - [ - "gene_synonym", - "EcoGene:EG13184" - ], - [ - "gene_synonym", - "JW2262" - ], - [ - "gene_synonym", - "GI:16130202" - ], - [ - "gene_synonym", - "NP_416770.1" - ], - [ - "gene_synonym", - "elaA" - ] - ], - "dna_sequence": "ATGATTGAATGGCAAGATCTGCATCACTCTGAATTATCGGTTTCCCAGCTTTATGCCTTATTACAACTGCGTTGCGCGGTGTTTGTTGTCGAGCAGAATTGCCCTTATCAGGATATCGATGGTGATGATTTGACGGGGGATAATCGCCATATTCTCGGTTGGAAAAATGATGAACTGGTGGCGTATGCGAGGATTCTGAAAAGTGATGATGATCTTGAGCCGGTCGTTATAGGTCGGGTGATTGTCAGTGAAGCGTTGCGTGGCGAAAAAGTGGGGCAGCAGCTGATGAGTAAAACACTCGAAACATGTACGCATCACTGGCCTGATAAGCCTGTTTACCTCGGGGCGCAGGCGCATCTGCAAAACTTCTACCAGAGTTTCGGTTTTATCCCTGTGACGGAGGTCTATGAAGAAGATGGTATCCCACACATTGGGATGGCACGCGAGGTAATTCAGGCGTAA", - "dna_sequence_length": 462, - "functions": [ - "GNAT family putative N-acetyltransferase" - ], - "id": "CDS_2252", - "location": [ - [ - "NC_000913", - 2381543, - "-", - 462 - ] - ], - "md5": "64fc1ab5c91fd8813072230abd67f6e7", - "parent_gene": "", - "protein_md5": "f60b025dbae23e3ebb8e35b400d5830d", - "protein_translation": "MIEWQDLHHSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDLTGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLETCTHHWPDKPVYLGAQAHLQNFYQSFGFIPVTEVYEEDGIPHIGMAREVIQA", - "protein_translation_length": 153, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2262" - ], - [ - "gene_synonym", - "rnz" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8V0" - ], - [ - "gene_synonym", - "b2268" - ], - [ - "gene_synonym", - "GI:90111412" - ], - [ - "gene_synonym", - "zipD" - ], - [ - "gene_synonym", - "EcoGene:EG14260" - ], - [ - "gene_synonym", - "rbn" - ], - [ - "gene_synonym", - "JW2263" - ], - [ - "gene_synonym", - "ASAP:ABE-0007496" - ], - [ - "gene_synonym", - "GeneID:946760" - ], - [ - "gene_synonym", - "ecoZ" - ], - [ - "gene_synonym", - "NP_416771.4" - ], - [ - "gene_synonym", - "elaC" - ] - ], - "dna_sequence": "ATGGAATTAATTTTTTTAGGTACTTCAGCCGGTGTGCCAACCCGCACGCGCAATGTCACGGCAATATTGCTTAACCTGCAACATCCGACCCAGAGCGGACTTTGGTTGTTTGACTGCGGTGAAGGCACCCAGCATCAGCTACTGCATACCGCCTTTAACCCTGGAAAACTGGACAAGATTTTTATCAGTCACCTTCATGGCGATCATCTTTTTGGTTTACCCGGCTTGCTGTGCAGTCGTTCTATGTCAGGCATTATCCAACCCTTAACGATTTATGGTCCGCAAGGTATCCGTGAATTTGTGGAAACCGCGCTGCGGATTAGCGGCTCATGGACCGATTATCCGCTGGAAATTGTCGAAATTGGCGCTGGCGAAATTCTCGATGATGGCCTGCGCAAAGTAACCGCTTATCCGCTGGAACACCCACTGGAATGTTATGGCTATCGTATTGAAGAACATGATAAACCGGGTGCATTAAATGCCCAGGCATTAAAAGCTGCTGGCGTGCCGCCTGGCCCACTGTTTCAGGAATTAAAAGCGGGCAAAACAATCACGCTGGAAGATGGAAGGCAGATTAACGGCGCAGATTACTTAGCTGCTCCAGTGCCAGGTAAAGCGCTCGCTATTTTCGGCGATACCGGCCCCTGCGATGCCGCACTTGACCTGGCTAAAGGTGTCGATGTCATGGTGCACGAAGCGACGCTGGATATAACCATGGAAGCCAAAGCCAATAGTCGCGGCCATAGCTCTACACGCCAGGCTGCGACACTAGCCCGTGAGGCTGGAGTCGGCAAGCTAATCATTACCCACGTCAGCTCGCGCTATGATGACAAAGGTTGTCAGCACCTGTTACGTGAATGCAGGTCAATTTTCCCGGCGACTGAACTGGCGAATGATTTCACCGTGTTTAACGTTTAA", - "dna_sequence_length": 918, - "functions": [ - "RNase BN, tRNA processing enzyme" - ], - "id": "CDS_2253", - "location": [ - [ - "NC_000913", - 2381608, - "+", - 918 - ] - ], - "md5": "563f3376bf90d291379a6c9705092ae0", - "parent_gene": "", - "protein_md5": "e570b1ca4c4fc5bb1dd2c2ddbdf24052", - "protein_translation": "MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIFPATELANDFTVFNV", - "protein_translation_length": 305, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47013" - ], - [ - "gene_synonym", - "ECK2263" - ], - [ - "gene_synonym", - "b2269" - ], - [ - "gene_synonym", - "ASAP:ABE-0007499" - ], - [ - "gene_synonym", - "NP_416772.1" - ], - [ - "gene_synonym", - "JW5840" - ], - [ - "gene_synonym", - "EcoGene:EG14261" - ], - [ - "gene_synonym", - "GI:16130204" - ], - [ - "gene_synonym", - "GeneID:946742" - ], - [ - "gene_synonym", - "elaD" - ] - ], - "dna_sequence": "ATGATGGTTACAGTTGTCAGCAATTATTGTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCGTTAGGTTATGATAAATTTGGGAAAGAAGCTGAAGATATTCTTTACCATATTGTTAGAACCCCAACAAATGAGACCCTATCGATTATCCGACTTATCAAAAATGCTTGTTTAAAATTATATAATCTGGCACATATCGCAACCAACTCCCCCCTCAAATCACATGATTCAGATGATCTCCTGTTCAAAAAACTATTCTCCCCTTCGAAATTAATGACAATTATCGGTGATGAAATTCCTCTTATATCTGAAAAACAGTCGCTTTCAAAGGTGCTTTTAAATGATGAGAATAATGAACTGAGTGATGGTACAAACTTCTGGGATAAAAATCGTCAATTAACCACAGATGAAATAGCTTGCTATCTTCAGAAGATCGCCGCTAATGCAAAAAATACTCAAGTCAATTATCCTACTGGTCTCTACGTCCCCTACTCCACCAGAACTCACCTGGAAGACGCTCTCAATGAAAATATTAAGAGCGATCCATCATGGCCGAATGAAGTCCAGTTATTCCCCATAAATACTGGCGGACACTGGATATTAGTTTCGCTACAGAAAATAGTAAATAAAAAAAATAATAAACTACAAATAAAATGCGTCATATTCAACTCATTGCGTGCACTAGGCTATGATAAAGAAAATTCACTTAAGCGTGTCATTAATAGTTTTAATTCTGAACTCATGGGAGAAATGTCGAATAATAATATAAAAGTTCATTTAAATGAACCAGAGATAATATTTTTACATGCCGATCTTCAGCAATACTTAAGCCAAAGTTGCGGTGCATTTGTGTGCATGGCAGCCCAGGAAGTGATTGAACAAAGGGAAAGCAATTCTGACAGCGCCCCCTATACGTTATTAAAAAACCATGCTGACAGATTTAAAAAATATTCAGCAGAAGAGCAGTACGAAATTGATTTTCAACATCGACTGGCAAACAGAAATTGTTATTTAGATAAATATGGCGATGCAAATATCAATCATTATTATAGAAACTTAGAAATAAAACACTCACAACCCAAAAATAGAGCATCCGGCAAAAGAGTGAGTTAA", - "dna_sequence_length": 1212, - "functions": [ - "protease, capable of cleaving an AMC-ubiquitin model substrate" - ], - "id": "CDS_2254", - "location": [ - [ - "NC_000913", - 2382713, - "+", - 1212 - ] - ], - "md5": "1da761ba899532f395701e318efcaeb4", - "parent_gene": "", - "protein_md5": "b48a66f5783df9fdee545754898beab5", - "protein_translation": "MMVTVVSNYCQLSQTQLSQTFAEKFTVTEELLQSLKKTALSGDEESIELLHNIALGYDKFGKEAEDILYHIVRTPTNETLSIIRLIKNACLKLYNLAHIATNSPLKSHDSDDLLFKKLFSPSKLMTIIGDEIPLISEKQSLSKVLLNDENNELSDGTNFWDKNRQLTTDEIACYLQKIAANAKNTQVNYPTGLYVPYSTRTHLEDALNENIKSDPSWPNEVQLFPINTGGHWILVSLQKIVNKKNNKLQIKCVIFNSLRALGYDKENSLKRVINSFNSELMGEMSNNNIKVHLNEPEIIFLHADLQQYLSQSCGAFVCMAAQEVIEQRESNSDSAPYTLLKNHADRFKKYSAEEQYEIDFQHRLANRNCYLDKYGDANINHYYRNLEIKHSQPKNRASGKRVS", - "protein_translation_length": 403, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfbK" - ], - [ - "gene_synonym", - "GeneID:946743" - ], - [ - "gene_synonym", - "b2270" - ], - [ - "gene_synonym", - "NP_416773.1" - ], - [ - "gene_synonym", - "ECK2264" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76481" - ], - [ - "gene_synonym", - "GI:16130205" - ], - [ - "gene_synonym", - "JW2265" - ], - [ - "gene_synonym", - "ASAP:ABE-0007501" - ], - [ - "gene_synonym", - "EcoGene:EG14095" - ] - ], - "dna_sequence": "ATGCGAAATAAAAATATAATCATGTTGCTTATGAGTAGTTTGATTTTGTCAGGATGTGGGCCGCAACCTGAGAATAAGGAAAGTCAGCAACAACAACCCAGTACTCCCACAGAGCAGCAAGTGCTTGCCGCGCAGCAAGCTGCAATAAAAGAGGCTGAGCAAAGCGCCGCCGCCGCGAAAGCCTTGGCCCAGCAAGAAGTGCAACAATATTCAGACAAACAGGCTTTACAGGGGCGATTGCAGGAAGCGCCAACATTTGCAAGAGCGGCTAAAGCAAAAGCTACACATATCGCAAATCCAGGAACCGCTCGCTACCAGCAGTTCGATGATAATCCGGTTAAGCAGGTAGCGCAAAATCCGTTGGCGACGTTTAGTCTTGACGTTGACACTGGCAGTTATGCGAATGTAAGGCGTTTCCTCAATCAAGGGCTGTTACCTCCGCCAGACGCTGTGCGGGTGGAGGAGATAGTCAATTATTTCCCGTCTGATTGGGATATCAAAGACAAACAATCTATTCCGGCCTCTAAGCCAATACCTTTCGCTATGCGCTACGAATTGGCACCTGCACCATGGAATGAACAGCGAACATTGCTGAAAGTTGATATCCTGGCGAAAGATCGCAAAAGTGAAGAGTTACCAGCTTCTAATCTGGTCTTTCTTATCGACACTTCTGGTTCAATGATTTCTGATGAACGTTTGCCACTTATCCAGTCTTCGTTGAAATTATTGGTCAAAGAACTTCGTGAGCAGGATAACATTGCCATCGTGACCTACGCTGGCGACTCCCGTATTGCATTGCCTTCTATCTCCGGGAGTCATAAGGCGGAAATTAATGCCGCAATTGATTCGCTGGATGCCGAAGGCAGTACCAATGGCGGTGCCGGGCTGGAACTGGCTTATCAGCAGGCGACGAAGGGGTTTATTAAGGGCGGCATCAATCGCATTTTATTAGCCACTGACGGTGACTTTAACGTTGGCATTGACGATCCAAAATCGATTGAATCAATGGTCAAAAAACAGCGGGAGTCTGGTGTTACTCTGTCGACGTTTGGCGTGGGGAATAGCAATTACAACGAGGCAATGATGGTGCGAATTGCCGATGTTGGTAACGGCAACTACAGCTACATTGATACCCTCTCTGAAGCGCAGAAAGTATTGAATAGTGAAATGCGGCAGATGTTGATTACCGTAGCAAAAGATGTCAAAGCGCAAATTGAGTTTAACCCCGCGTGGGTAACGGAATACCGTCAGATTGGTTATGAAAAGCGCCAACTTCGGGTGGAACATTTTAATAACGACAACGTTGATGCAGGGGATATAGGCGCAGGCAAACATATAACGTTGTTATTCGAATTAACGCTGAACGGGCAAAAAGCATCAATTGATAAGTTACGCTATGCCCCGGATAACAAATTAGCGAAATCGGACAAAACGAAAGAACTGGCCTGGTTAAAAATTCGCTGGAAATACCCGCAGGGAAAAGAAAGTCAGTTAGTTGAATTCCCGCTGGGGCCAACAATAAACGCGCCCTCTGAAGATATGCGTTTTCGCGCAGCAGTAGCTGCATATGGGCAAAAGTTACGCGGTTCTGAATACCTGAACAATACCTCCTGGCAGCAGATCAAACAGTGGGCTCAGCAGGCAAAAGGGGAAGATCCACAGGGTTACAGGGCGGAATTTATTCGCCTGATTGAACTGGCGGATGGTGTGACTGACATCAGTCAGTGA", 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- "gene_synonym", - "UniProtKB/Swiss-Prot:P76482" - ], - [ - "gene_synonym", - "GeneID:945832" - ], - [ - "gene_synonym", - "ECK2265" - ], - [ - "gene_synonym", - "yfbL" - ], - [ - "gene_synonym", - "GI:90111413" - ], - [ - "gene_synonym", - "NP_416774.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0007506" - ], - [ - "gene_synonym", - "b2271" - ], - [ - "gene_synonym", - "JW2266" - ], - [ - "gene_synonym", - "EcoGene:EG14096" - ] - ], - "dna_sequence": "ATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCGCAGAATATATAAAAGAGGTCTTTGTCAGTAGCGGTGCCAGAGTTACCTCGCAGGACGTCCCCATTACGGGTGGCCCCTACAAAAACATTGTTGCTGATTATGGTCCTGCCGATGGACCGCTGATTATTATTGGTGCGCATTATGACTCTGCCAGCAGTTATGAAAACGATCAATTGACCTATACGCCGGGCGCGGATGATAACGCCAGCGGTGTGGCAGGATTACTCGAACTGGCACGTTTGTTACATCAGCAAGTACCGAAAACAGGCGTGCAGCTGGTCGCCTATGCGTCGGAAGAACCGCCCTTCTTTCGTAGCGATGAAATGGGGAGCGCGGTGCATGCAGCTTCGCTTGAGCGTCCAGTGAAATTAATGATAGCACTGGAGATGATTGGCTATTACGACTCTGCGCCTGGAAGCCAGAATTACCCTTACCCGGCAATGTCCTGGCTTTATCCCGATCGGGGAGACTTTATTGCCGTGGTCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGGTTTATTCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAA", - "dna_sequence_length": 972, - "functions": [ - "putative M28A family peptidase" - ], - "id": "CDS_2256", - "location": [ - [ - "NC_000913", - 2385860, - "+", - 972 - ] - ], - "md5": "5c97b9a56f8b9da2fcfc78132dfae2ea", - "parent_gene": "", - "protein_md5": "16e9d102869171f7f116465f8ac3a806", - "protein_translation": "MKKIIFAFIILFVFLLPMIIFYQPWVNALPSTPRHASPEQLEKTVRYLTQTVHPRSADNIDNLNRSAEYIKEVFVSSGARVTSQDVPITGGPYKNIVADYGPADGPLIIIGAHYDSASSYENDQLTYTPGADDNASGVAGLLELARLLHQQVPKTGVQLVAYASEEPPFFRSDEMGSAVHAASLERPVKLMIALEMIGYYDSAPGSQNYPYPAMSWLYPDRGDFIAVVGRIQDINAVRQVKAALLSSQDLSVYSMNTPGFIPGIDFSDHLNYWQHDIPAIMITDTAFYRNKQYHLPGDTADRLNYQKMAQVVDGVITLLYNSK", - "protein_translation_length": 323, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2272" - ], - [ - "gene_synonym", - "ECK2266" - ], - [ - "gene_synonym", - "GeneID:946745" - ], - [ - "gene_synonym", - "yfbM" - ], - [ - "gene_synonym", - "ASAP:ABE-0007509" - ], - [ - "gene_synonym", - "GI:16130207" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76483" - ], - [ - "gene_synonym", - "JW2267" - ], - [ - "gene_synonym", - "EcoGene:EG14097" - ], - [ - "gene_synonym", - "NP_416775.1" - ] - ], - "dna_sequence": "ATGGGAATGATTGGCTATTTTGCAGAAATTGACTCAGAAAAGATTAACCAACTGCTTGAGTCTACTGAAAAACCTTTGATGGATAATATACATGACACGCTTTCAGGATTACGCCGACTGGATATTGATAAACGCTGGGATTTTTTACACTTTGGGCTGACAGGCACCTCTGCTTTTGATCCCGCGAAGAATGATCCGCTGAGTCGTGCCGTGCTTGGTGAACACAGCCTCGAAGATGGCATAGATGGCTTCCTTGGATTGACCTGGAATCAGGAGTTAGCCGCGACAATCGACCGACTGGAATCACTGGATCGAAATGAACTGCGTAAACAGTTTTCCATTAAGCGACTCAATGAAATGGAGATTTATCCGGGAGTGACCTTTTCAGAAGAGTTAGAGGGGCAACTCTTTGCCTCGATCATGCTTGATATGGAAAAGCTGATTAGCGCGTATCGACGTATGCTGCGACAAGGGAATCATGCGCTGACGGTTATTGTTGGGTGA", - "dna_sequence_length": 504, - "functions": [ - "DUF1877 family protein" - ], - "id": "CDS_2257", - "location": [ - [ - "NC_000913", - 2386934, - "+", - 504 - ] - ], - "md5": "a6ccccb1b3ad85d41200bbe89095aaa1", - "parent_gene": "", - "protein_md5": "c167705fba3c308ba95a407e4b48ea83", - "protein_translation": "MGMIGYFAEIDSEKINQLLESTEKPLMDNIHDTLSGLRRLDIDKRWDFLHFGLTGTSAFDPAKNDPLSRAVLGEHSLEDGIDGFLGLTWNQELAATIDRLESLDRNELRKQFSIKRLNEMEIYPGVTFSEELEGQLFASIMLDMEKLISAYRRMLRQGNHALTVIVG", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2273" - ], - [ - "gene_synonym", - "NP_416776.1" - ], - [ - "gene_synonym", - "yfbN" - ], - [ - "gene_synonym", - "ECK2267" - ], - [ - "gene_synonym", - "GeneID:946748" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76484" - ], - [ - "gene_synonym", - "ASAP:ABE-0007511" - ], - [ - "gene_synonym", - "EcoGene:EG14098" - ], - [ - "gene_synonym", - "JW2268" - ], - [ - "gene_synonym", - "GI:16130208" - ] - ], - "dna_sequence": "ATGGAATGGTTAAGTGAAATTCGTAAACTTCGGAAGAACGTACCTGTCGGTATCCAGGTTGCCAGACGTTTGTTAGAGAGGACTGGCGGTGATGTTGATGAAGCCATCAAGTTGTTTCATATTGACCAAATCAATATATTGACGGCAAAAGCAGACGTCACTCATCAGGAAGCAGAGAATGTTTTGTTGGCTACAAACTATGATATTGCAGAAGCTCTTCGGCGTATTGATGAACAACGCTATACACTGACGGAATTGATTTTGCGTAAAAATAAGGATGCCGGAGATGCCTTAAACAATATAGCATTGGCGATTGAATATGAGTGGGATCTCAAGCGTAAGTTTTGGTTTGGTTTTGCAGATATCCAATTATTACCGCCAGTTTTACAAACATTTATGCTGGTTTATGAATGGCATGAATATGTTGGTTGGGAAGGAATGGAGTGTGGGATATTTTTTGAAAGTGATCATACTCACCAGCAATTGCAAGCTTTGGGGTTATTAGAACTCGCCCAAAAAATGGTTACTGCAAGAATCCGATATGATGAGCTAAAAGACAAGGCCGAAAATTTTCACGAGATTACAGAGGATGACATATTCAAAATGCTTATAATACATTGTGACCAACTTGCAAGAGAGGTTGATTCTATATTACTGCAATTTGTGAAGGACAATATTGATGTTTTCCCGTGTCGCCATAACAGACACGAGTTATAA", - "dna_sequence_length": 717, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2258", - "location": [ - [ - "NC_000913", - 2388426, - "-", - 717 - ] - ], - "md5": "1820b4e2640d985df2d105bd78534c29", - "parent_gene": "", - "protein_md5": "86ae019ca6dbf32d41f269e7ccf0d4d0", - "protein_translation": "MEWLSEIRKLRKNVPVGIQVARRLLERTGGDVDEAIKLFHIDQINILTAKADVTHQEAENVLLATNYDIAEALRRIDEQRYTLTELILRKNKDAGDALNNIALAIEYEWDLKRKFWFGFADIQLLPPVLQTFMLVYEWHEYVGWEGMECGIFFESDHTHQQLQALGLLELAQKMVTARIRYDELKDKAENFHEITEDDIFKMLIIHCDQLAREVDSILLQFVKDNIDVFPCRHNRHEL", - "protein_translation_length": 238, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946752" - ], - [ - "gene_synonym", - "yfbO" - ], - [ - "gene_synonym", - "b2274" - ], - [ - "gene_synonym", - "NP_416777.2" - ], - [ - "gene_synonym", - "ECK2268" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76485" - ], - [ - "gene_synonym", - "EcoGene:EG14099" - ], - [ - "gene_synonym", - "JW2269" - ], - [ - "gene_synonym", - "GI:226524734" - ], - [ - "gene_synonym", - "ASAP:ABE-0007518" - ] - ], - "dna_sequence": "ATGACACCTTTAGAACGCATTACCCAACTTGTTAATATCAATGGTGATGTTAATAATCCTGATACTCCTCGTCCATTGTTATCTCTTGAGGATTTTTTTATTGACAATAATATCCATGGTTCAATATGTTGCAATGTGATTCCAGAACAATCTCCGCAAGCTATCTATCACCATTTTCTGAAAATACGTGAGCGTAACAATGTTAGTGATGTTTTGGTAGAAATTACGATGTTCGATGACCCAGACTGGCCCTTTAGTGAAAGTATTTTAGTTATCACCACTGCTTCACCAGAAGAAGTTCAGAGCTGGTTTGTAGAAGAAATTGCCCCTGATGAGTGCTGGGAAGGATGGTCAGAAGATACGGAGCATGGATGGGTTGAAGTCCCTGTGGGTATGCATCCGGTTACTTGTTGGTGGGATTAA", - "dna_sequence_length": 423, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2259", - "location": [ - [ - "NC_000913", - 2388635, - "+", - 423 - ] - ], - "md5": "7305378500150d0b3f58c95afed5f546", - "parent_gene": "", - "protein_md5": "594613c09ca4c1ea1e5657fe80067111", - "protein_translation": "MTPLERITQLVNINGDVNNPDTPRPLLSLEDFFIDNNIHGSICCNVIPEQSPQAIYHHFLKIRERNNVSDVLVEITMFDDPDWPFSESILVITTASPEEVQSWFVEEIAPDECWEGWSEDTEHGWVEVPVGMHPVTCWWD", - "protein_translation_length": 140, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946754" - ], - [ - "gene_synonym", - "NP_416778.2" - ], - [ - "gene_synonym", - "b2275" - ], - [ - "gene_synonym", - "EcoGene:EG14100" - ], - [ - "gene_synonym", - "ECK2269" - ], - [ - "gene_synonym", - "JW2270" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76486" - ], - [ - "gene_synonym", - "GI:345452721" - ], - [ - "gene_synonym", - "yfbP" - ], - [ - "gene_synonym", - "ASAP:ABE-0007524" - ] - ], - "dna_sequence": "ATGAAACTTATTCCTCGCAGTAGTGATATTTCACCTGGCATTGATGGAATTTGCCCGGGGCCTTTTCCTCCGAACGGATTTACCGTACTTACAGATGCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTGCAGCACAGGCTGCGCTTAATGCTTATCTTGGCAATTGGGCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGATGTCCCGAATTTCCAGGATGATCCTGTGATTCAGTGCATTAAAGAACAAGGATTAGATCTTAGCTTTGGAGGAACAAAGGAAAATAATAATTACCCCTTGATGCAGATGTGTGTTGATACTTATTTTGCGCAGAGAAAACCGCTTCAGGCATTAACCCTGTTACATAATTATGCCTGGATAATGTCCAGTGAAACGACTGCATTTCAGGAACGCTATGATTTTAATATCGATGAATGGCGGGCAAAATTCAGGCAGTTATGTTTAGAGTATTTTGGCGATAGTCGTACACAGTTCACTTAA", - "dna_sequence_length": 849, - "functions": [ - "TPR-like repeats-containing protein" - ], - "id": "CDS_2260", - "location": [ - [ - "NC_000913", - 2389116, - "+", - 849 - ] - ], - "md5": "dd4cf7606d3d6f397c84e0ffcb0f4009", - "parent_gene": "", - "protein_md5": "2a56b67a8afad091f5da9e616f631735", - "protein_translation": "MKLIPRSSDISPGIDGICPGPFPPNGFTVLTDAAYGNGDCFGLYWPIGQEHKLPIVCETYHDEWRIVPAFSSIKKFEEWLEVNDDDPHENGISIEDQDFAANLFRVARKCLSTGRLDDALPLLQRATEQLPEVSEYWLALAIQYRRCKKTEAAAQAALNAYLGNWAFGVPDNKVIHLLSQAADVPNFQDDPVIQCIKEQGLDLSFGGTKENNNYPLMQMCVDTYFAQRKPLQALTLLHNYAWIMSSETTAFQERYDFNIDEWRAKFRQLCLEYFGDSRTQFT", - "protein_translation_length": 282, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416779.2" - ], - [ - "gene_synonym", - "b2276" - ], - [ - "gene_synonym", - "ASAP:ABE-0007526" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFF0" - ], - [ - "gene_synonym", - "GeneID:945136" - ], - [ - "gene_synonym", - "JW2271" - ], - [ - "gene_synonym", - "GI:145698289" - ], - [ - "gene_synonym", - "ECK2270" - ], - [ - "gene_synonym", - "nuoN" - ], - [ - "gene_synonym", - "EcoGene:EG12093" - ] - ], - "dna_sequence": "ATGACAATAACTCCACAAAACCTGATCGCACTGCTACCGTTGCTGATCGTCGGCTTGACGGTGGTGGTTGTGATGCTCTCCATTGCGTGGCGACGCAATCATTTCCTCAACGCTACGCTCTCGGTTATTGGGCTTAACGCGGCGCTGGTTTCGCTCTGGTTTGTTGGCCAGGCGGGCGCTATGGACGTTACGCCGCTGATGCGCGTTGATGGTTTCGCCATGCTTTACACCGGGCTGGTATTGTTGGCGAGCCTCGCCACCTGTACTTTCGCCTACCCGTGGCTTGAAGGCTATAACGACAACAAGGATGAGTTCTACCTGTTGGTGTTAATTGCCGCGCTGGGCGGGATCCTGCTGGCGAATGCCAACCATCTGGCGTCTCTGTTCCTCGGTATCGAACTGATCTCTTTGCCGCTGTTTGGCCTGGTCGGTTACGCTTTCCGCCAGAAACGTTCACTGGAAGCCAGTATCAAATACACCATCCTTTCTGCCGCAGCGTCTTCTTTCCTGCTGTTTGGTATGGCGCTGGTGTATGCGCAGTCTGGCGACCTGTCGTTTGTCGCGTTGGGTAAAAACCTTGGCGACGGTATGCTCAACGAGCCGCTGTTGCTGGCAGGTTTCGGCCTGATGATTGTTGGCCTCGGCTTCAAACTCTCTCTGGTGCCGTTCCACCTGTGGACGCCAGACGTATACCAGGGCGCGCCTGCGCCGGTTTCCACTTTCCTGGCGACGGCGAGCAAAATCGCTATCTTCGGTGTGGTGATGCGTCTGTTCCTCTACGCACCGGTGGGTGACAGCGAAGCGATTCGCGTGGTGCTGGCGATTATCGCCTTTGCCTCCATCATCTTCGGTAACCTGATGGCGCTGAGCCAGACCAATATCAAACGTCTGCTCGGTTACTCATCTATCTCTCACCTCGGCTATCTGCTGGTAGCGCTGATTGCGCTGCAAACCGGCGAGATGTCGATGGAAGCGGTAGGGGTTTACCTGGCCGGTTATCTGTTCAGCAGCCTCGGCGCGTTCGGCGTGGTCAGCCTGATGTCCAGCCCGTATCGTGGCCCGGATGCTGATTCCCTGTTCTCTTACCGCGGTCTGTTCTGGCATCGTCCGATCCTCGCGGCAGTGATGACGGTGATGATGCTGTCTCTGGCCGGTATCCCGATGACGCTGGGCTTTATCGGTAAGTTCTACGTGCTGGCGGTCGGTGTCCAGGCACACTTGTGGTGGCTGGTGGGTGCCGTGGTTGTCGGTTCGGCAATCGGCCTCTACTACTACCTGCGCGTGGCGGTGAGCCTGTATCTTCACGCCCCGGAACAACCGGGTCGCGATGCACCATCAAACTGGCAGTACAGCGCGGGCGGTATCGTTGTGCTGATCTCTGCACTGTTGGTACTGGTGCTGGGTGTATGGCCACAACCGCTGATTAGCATTGTGCGTTTGGCAATGCCGCTGATGTAA", - "dna_sequence_length": 1458, - "functions": [ - "NADH:ubiquinone oxidoreductase, membrane subunit N" - ], - "id": "CDS_2261", - "location": [ - [ - "NC_000913", - 2391505, - "-", - 1458 - ] - ], - "md5": "449a785c9df45fb963b8499f7247ad51", - "parent_gene": "", - "protein_md5": "4e61f4990888ff483eea44f8c378b922", - "protein_translation": "MTITPQNLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIGLNAALVSLWFVGQAGAMDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNKDEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYTILSAAASSFLLFGMALVYAQSGDLSFVALGKNLGDGMLNEPLLLAGFGLMIVGLGFKLSLVPFHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAIIAFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTGEMSMEAVGVYLAGYLFSSLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGFIGKFYVLAVGVQAHLWWLVGAVVVGSAIGLYYYLRVAVSLYLHAPEQPGRDAPSNWQYSAGGIVVLISALLVLVLGVWPQPLISIVRLAMPLM", - "protein_translation_length": 485, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFE8" - ], - [ - "gene_synonym", - "NP_416780.1" - ], - [ - "gene_synonym", - "GI:16130212" - ], - [ - "gene_synonym", - "ASAP:ABE-0007529" - ], - [ - "gene_synonym", - "EcoGene:EG11773" - ], - [ - "gene_synonym", - "JW2272" - ], - [ - "gene_synonym", - "GeneID:947731" - ], - [ - "gene_synonym", - "nuoA" - ], - [ - "gene_synonym", - "ECK2271" - ], - [ - "gene_synonym", - "nuoM" - ], - [ - "gene_synonym", - "b2277" - ] - ], - "dna_sequence": "ATGTTACTACCCTGGCTAATATTAATTCCCTTTATTGGCGGCTTCCTGTGCTGGCAGACCGAACGCTTTGGCGTCAAGGTGCCACGCTGGATCGCGCTGATCACCATGGGATTGACGCTGGCGCTGTCGCTGCAACTGTGGTTGCAGGGCGGTTATTCACTGACGCAATCCGCCGGAATTCCGCAGTGGCAGTCTGAATTCGACATGCCGTGGATCCCGCGTTTTGGTATCTCTATTCATCTCGCCATTGACGGGCTGTCGCTGCTGATGGTCGTGCTGACCGGTCTGCTCGGTGTGCTGGCGGTACTATGTTCGTGGAAAGAGATCGAAAAATATCAGGGCTTCTTCCACCTCAACCTGATGTGGATCCTGGGCGGCGTTATCGGCGTGTTCCTTGCCATCGACATGTTCCTGTTCTTCTTCTTCTGGGAAATGATGCTGGTGCCGATGTACTTCCTGATCGCACTGTGGGGGCATAAAGCCTCTGACGGTAAAACGCGTATCACGGCGGCAACCAAGTTCTTCATTTACACCCAGGCGAGTGGCCTGGTGATGTTGATTGCCATCCTGGCGCTGGTTTTTGTTCACTACAATGCGACCGGCGTCTGGACCTTCAACTATGAAGAGCTGCTGAATACGCCAATGTCCAGTGGTGTGGAATACCTGTTAATGCTGGGCTTCTTCATCGCCTTCGCAGTCAAAATGCCGGTGGTTCCGCTGCATGGCTGGCTGCCGGATGCGCACTCCCAGGCTCCGACCGCCGGTTCCGTTGACCTCGCGGGGATCTTGCTGAAAACTGCCGCTTACGGTTTGCTGCGTTTCTCCCTGCCGCTGTTCCCGAACGCGTCGGCAGAGTTCGCGCCAATTGCTATGTGGCTGGGTGTTATCGGCATCTTCTACGGTGCGTGGATGGCCTTCGCCCAGACCGATATCAAACGTCTGATCGCCTACACCTCGGTTTCCCACATGGGCTTCGTGCTGATTGCTATCTACACCGGCAGCCAGTTGGCCTACCAGGGCGCGGTAATCCAGATGATTGCGCACGGTTTGTCGGCGGCGGGTCTGTTTATTCTTTGTGGTCAGCTTTATGAACGTATCCATACCCGCGACATGCGCATGATGGGCGGTCTGTGGAGCAAGATGAAATGGCTGCCAGCACTGTCGCTGTTCTTTGCGGTGGCAACGCTTGGGATGCCTGGCACCGGTAACTTCGTCGGCGAATTTATGATTCTGTTCGGCAGCTTCCAGGTTGTACCGGTGATTACCGTTATCTCTACCTTTGGGCTGGTCTTTGCATCTGTTTATTCGCTGGCGATGTTACATCGCGCTTACTTCGGTAAAGCGAAAAGCCAGATTGCCAGCCAGGAACTGCCAGGGATGTCGCTGCGTGAGCTGTTTATGATCCTGTTGCTGGTGGTGCTGCTGGTACTGCTGGGCTTCTATCCGCAGCCGATTCTGGATACCTCGCACTCCGCGATTGGCAATATCCAGCAGTGGTTTGTTAATTCCGTTACTACTACAAGGCCGTAA", - "dna_sequence_length": 1530, - "functions": [ - "NADH:ubiquinone oxidoreductase, membrane subunit M" - ], - "id": "CDS_2262", - "location": [ - [ - "NC_000913", - 2393041, - "-", - 1530 - ] - ], - "md5": "04d2a8a4b5a7d1df5e703899918145fd", - "parent_gene": "", - "protein_md5": "5472dc539785dfa1047e5dc5e1ab8e7e", - "protein_translation": "MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTRP", - "protein_translation_length": 509, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12092" - ], - [ - "gene_synonym", - "b2278" - ], - [ - "gene_synonym", - "JW2273" - ], - [ - "gene_synonym", - "GI:16130213" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33607" - ], - [ - "gene_synonym", - "GeneID:945540" - ], - [ - "gene_synonym", - "NP_416781.1" - ], - [ - "gene_synonym", - "ECK2272" - ], - [ - "gene_synonym", - "nuoL" - ], - [ - "gene_synonym", - "ASAP:ABE-0007532" - ] - ], - "dna_sequence": "ATGAACATGCTTGCCTTAACCATTATTTTGCCATTGATTGGCTTCGTCCTGCTGGCATTCTCCCGTGGGCGCTGGTCTGAAAACGTCTCGGCGATCGTCGGCGTAGGCTCTGTGGGCCTGGCGGCGCTGGTAACCGCCTTTATCGGCGTTGATTTCTTCGCTAACGGCGAGCAGACATACAGCCAGCCGCTGTGGACGTGGATGTCGGTAGGCGACTTTAACATCGGTTTTAACCTGGTGCTGGACGGCCTGTCGCTGACCATGCTCTCGGTGGTCACTGGTGTGGGTTTCCTTATTCACATGTACGCCTCCTGGTATATGCGCGGTGAAGAGGGCTACTCTCGCTTCTTCGCTTACACCAACCTGTTCATCGCCAGCATGGTGGTTCTGGTGCTTGCCGACAACCTGCTGCTGATGTACCTCGGCTGGGAAGGCGTGGGCCTGTGCTCCTATCTGCTGATCGGGTTCTATTACACCGATCCGAAGAATGGCGCAGCGGCAATGAAAGCGTTCGTCGTGACCCGTGTGGGTGACGTGTTCCTCGCTTTCGCACTGTTCATTCTTTACAACGAACTGGGCACCCTGAACTTCCGCGAAATGGTGGAACTGGCACCAGCGCACTTTGCTGACGGCAATAACATGCTGATGTGGGCGACGCTGATGCTGCTGGGCGGTGCGGTCGGTAAATCTGCGCAGTTGCCGTTGCAGACATGGCTTGCCGACGCGATGGCGGGCCCGACGCCTGTCTCCGCGCTGATCCACGCCGCAACCATGGTAACCGCGGGTGTCTACCTGATCGCCCGTACCCACGGCCTGTTCCTGATGACGCCGGAAGTTCTGCATCTGGTGGGTATTGTCGGGGCGGTTACGCTGCTGCTGGCCGGTTTTGCCGCGCTGGTACAGACCGACATCAAACGTGTTCTCGCTTACTCTACCATGAGCCAGATTGGCTACATGTTCCTCGCGCTTGGCGTGCAGGCATGGGATGCGGCGATTTTCCACTTGATGACCCACGCGTTCTTTAAAGCGCTGCTGTTCCTGGCATCCGGTTCCGTCATTCTGGCCTGCCATCACGAACAGAACATCTTCAAGATGGGCGGTCTGCGTAAATCTATTCCGCTGGTTTATCTCTGCTTCCTGGTGGGCGGCGCAGCACTGTCGGCACTACCGCTGGTCACTGCGGGCTTCTTCAGTAAGGATGAGATCCTCGCGGGTGCGATGGCGAATGGTCATATCAATCTGATGGTGGCAGGTCTGGTCGGTGCGTTTATGACCTCGCTCTACACCTTCCGTATGATTTTCATCGTCTTCCACGGAAAAGAACAAATTCACGCTCACGCCGTGAAAGGGGTAACTCACAGCCTGCCGCTGATTGTGCTGCTGATCCTTTCCACCTTCGTTGGCGCACTGATTGTACCGCCGCTGCAGGGCGTGCTTCCGCAAACGACGGAACTGGCGCACGGCAGCATGTTGACCCTGGAAATTACCTCTGGCGTGGTCGCGGTGGTCGGCATTCTGCTGGCAGCCTGGCTGTGGCTGGGTAAACGTACTCTGGTGACCTCCATCGCCAACAGTGCGCCGGGCCGTCTGCTGGGCACCTGGTGGTACAACGCCTGGGGATTTGACTGGCTGTATGACAAAGTGTTCGTCAAGCCGTTCCTGGGTATTGCCTGGTTGCTGAAACGCGATCCGCTGAACTCAATGATGAACATCCCGGCTGTCCTTTCCCGCTTTGCAGGTAAAGGTCTGCTGTTAAGTGAGAACGGCTATCTGCGCTGGTATGTGGCATCCATGAGCATCGGTGCGGTCGTGGTGCTGGCACTGTTGATGGTACTGCGTTGA", - "dna_sequence_length": 1842, - "functions": [ - "NADH:ubiquinone oxidoreductase, membrane subunit L" - ], - "id": "CDS_2263", - "location": [ - [ - "NC_000913", - 2395046, - "-", - 1842 - ] - ], - "md5": "88fa2d3b67649fbe94c3297372b08ff9", - "parent_gene": "", - "protein_md5": "8186956538afccc908488f644a376133", - "protein_translation": "MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGEQTYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKGVTHSLPLIVLLILSTFVGALIVPPLQGVLPQTTELAHGSMLTLEITSGVVAVVGILLAAWLWLGKRTLVTSIANSAPGRLLGTWWYNAWGFDWLYDKVFVKPFLGIAWLLKRDPLNSMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSIGAVVVLALLMVLR", - "protein_translation_length": 613, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2279" - ], - [ - "gene_synonym", - "GeneID:947580" - ], - [ - "gene_synonym", - "ASAP:ABE-0007534" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFE4" - ], - [ - "gene_synonym", - "GI:16130214" - ], - [ - "gene_synonym", - "JW2274" - ], - [ - "gene_synonym", - "NP_416782.1" - ], - [ - "gene_synonym", - "nuoK" - ], - [ - "gene_synonym", - "ECK2273" - ], - [ - "gene_synonym", - "EcoGene:EG12091" - ] - ], - "dna_sequence": "ATGATCCCCTTACAACATGGACTGATCCTCGCGGCAATCTTATTCGTTCTTGGCTTAACCGGTCTGGTTATCCGTCGCAATCTGCTGTTTATGTTGATTGGTCTGGAAATCATGATTAACGCCTCCGCGCTGGCCTTCGTGGTCGCCGGAAGCTACTGGGGCCAGACCGACGGTCAGGTGATGTACATTCTCGCCATCAGCCTCGCGGCGGCAGAAGCGAGTATCGGCCTTGCGCTGCTGCTGCAACTTCACCGTCGTCGCCAGAACCTGAACATCGATTCAGTAAGTGAGATGCGCGGATGA", - "dna_sequence_length": 303, - "functions": [ - "NADH:ubiquinone oxidoreductase, membrane subunit K" - ], - "id": "CDS_2264", - "location": [ - [ - "NC_000913", - 2395345, - "-", - 303 - ] - ], - "md5": "4e57967ca0836968c184320197c8e852", - "parent_gene": "", - "protein_md5": "26e88bb20aa45666ba298fd045b8a027", - "protein_translation": "MIPLQHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASALAFVVAGSYWGQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG", - "protein_translation_length": 100, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2280" - ], - [ - "gene_synonym", - "GeneID:946756" - ], - [ - "gene_synonym", - "NP_416783.1" - ], - [ - "gene_synonym", - "EcoGene:EG12090" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFE0" - ], - [ - "gene_synonym", - "GI:16130215" - ], - [ - "gene_synonym", - "JW2275" - ], - [ - "gene_synonym", - "nuoJ" - ], - [ - "gene_synonym", - "ASAP:ABE-0007536" - ], - [ - "gene_synonym", - "ECK2274" - ] - ], - "dna_sequence": "ATGGAGTTCGCTTTTTATATCTGTGGCCTGATAGCCATACTTGCGACCTTGCGAGTGATCACCCATACCAATCCGGTACACGCACTGCTGTACCTGATTATTTCGCTGCTGGCGATTTCCGGGGTGTTCTTCTCACTGGGCGCTTACTTCGCCGGTGCGCTGGAAATTATCGTCTACGCGGGTGCCATTATGGTGCTGTTCGTGTTCGTGGTGATGATGCTCAACCTGGGCGGTTCAGAAATCGAACAGGAACGCCAGTGGCTGAAACCGCAGGTGTGGATTGGTCCGGCAATTTTGTCGGCCATCATGCTGGTGGTGATTGTTTACGCCATCCTCGGTGTTAACGATCAGGGTATCGACGGTACGCCAATCAGTGCTAAAGCAGTGGGTATTACGCTGTTCGGGCCTTACGTACTGGCGGTGGAACTGGCTTCTATGCTGCTGCTCGCAGGTCTGGTTGTGGCCTTCCACGTCGGTCGTGAAGAGCGTGCGGGTGAAGTGCTGAGCAATCGTAAAGACGACAGCGCGAAAAGAAAAACGGAGGAGCACGCATGA", - "dna_sequence_length": 555, - "functions": [ - "NADH:ubiquinone oxidoreductase, membrane subunit J" - ], - "id": "CDS_2265", - "location": [ - [ - "NC_000913", - 2395896, - "-", - 555 - ] - ], - "md5": "fadd6e02330e6dccf17ee435de01249d", - "parent_gene": "", - "protein_md5": "dadb23aca088493e208ad39c45dda147", - "protein_translation": "MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAGEVLSNRKDDSAKRKTEEHA", - "protein_translation_length": 184, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416784.1" - ], - [ - "gene_synonym", - "b2281" - ], - [ - "gene_synonym", - "GeneID:946757" - ], - [ - "gene_synonym", - "EcoGene:EG12089" - ], - [ - "gene_synonym", - "JW2276" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFD6" - ], - [ - "gene_synonym", - "GI:16130216" - ], - [ - "gene_synonym", - "ASAP:ABE-0007539" - ], - [ - "gene_synonym", - "nuoI" - ], - [ - "gene_synonym", - "ECK2275" - ] - ], - "dna_sequence": "ATGACCTTAAAAGAATTGTTAGTAGGTTTCGGCACCCAGGTTCGTAGTATCTGGATGATCGGCCTGCACGCGTTCGCCAAACGCGAAACGCGAATGTACCCGGAAGAGCCGGTCTATCTGCCGCCCCGTTATCGTGGTCGTATCGTTCTGACCCGCGACCCGGACGGCGAAGAGCGTTGCGTAGCCTGTAACCTCTGCGCGGTAGCCTGCCCGGTCGGCTGTATCTCGCTGCAAAAAGCAGAAACCAAAGACGGTCGCTGGTACCCGGAATTTTTCCGCATCAACTTCTCACGCTGCATTTTCTGTGGTCTGTGCGAAGAAGCCTGTCCGACCACGGCGATTCAGTTAACCCCGGATTTCGAAATGGGGGAATACAAGCGCCAGGATCTGGTTTACGAGAAAGAGGATCTGCTGATCTCCGGTCCGGGCAAATACCCGGAATATAACTTCTACCGGATGGCAGGTATGGCAATCGACGGCAAAGATAAGGGCGAAGCAGAGAACGAAGCCAAGCCTATCGACGTCAAGAGCCTGTTACCGTAA", - "dna_sequence_length": 543, - "functions": [ - "NADH:ubiquinone oxidoreductase, chain I" - ], - "id": "CDS_2266", - "location": [ - [ - "NC_000913", - 2396450, - "-", - 543 - ] - ], - "md5": "f0c74724e758ae926d9ad6b159b1b199", - "parent_gene": "", - "protein_md5": "ae0700384201c95c88810a02dd3a21f9", - "protein_translation": "MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP", - "protein_translation_length": 180, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2282" - ], - [ - "gene_synonym", - "NP_416785.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007541" - ], - [ - "gene_synonym", - "EcoGene:EG12088" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFD4" - ], - [ - "gene_synonym", - "JW2277" - ], - [ - "gene_synonym", - "GI:16130217" - ], - [ - "gene_synonym", - "nuoH" - ], - [ - "gene_synonym", - "GeneID:946761" - ], - [ - "gene_synonym", - "ECK2276" - ] - ], - "dna_sequence": "ATGAGTTGGATATCACCGGAACTGATTGAGATCCTGCTGACCATCCTCAAAGCGGTGGTGATCCTGCTGGTGGTTGTCACCTGCGGGGCATTCATGAGCTTTGGCGAACGTCGCCTGCTGGGTCTGTTCCAGAACCGTTACGGACCTAACCGTGTTGGCTGGGGCGGTTCGCTCCAGCTGGTTGCGGACATGATCAAAATGTTCTTTAAAGAAGACTGGATCCCGAAATTCTCGGATCGCGTCATCTTTACCCTGGCACCGATGATTGCCTTTACCTCGCTGCTGCTGGCCTTTGCGATTGTGCCAGTCAGTCCGGGTTGGGTGGTTGCCGACCTGAACATCGGGATTTTGTTCTTCCTGATGATGGCAGGTCTGGCGGTTTACGCGGTGCTGTTTGCGGGCTGGTCAAGTAACAACAAATACTCGTTGCTGGGTGCGATGCGTGCTTCTGCGCAGACCCTGAGCTACGAAGTGTTCCTCGGGCTTTCCTTGATGGGCGTGGTGGCGCAGGCCGGTTCATTCAACATGACCGACATCGTCAACAGCCAGGCGCATGTGTGGAACGTTATCCCGCAATTCTTTGGTTTTATTACCTTTGCCATCGCGGGCGTGGCGGTATGTCACCGTCACCCGTTTGACCAGCCGGAAGCCGAGCAGGAACTGGCGGATGGTTACCACATTGAATATTCCGGTATGAAGTTCGGTCTGTTCTTCGTGGGTGAGTACATCGGGATTGTGACCATCTCTGCATTGATGGTGACGCTGTTCTTCGGTGGCTGGCAAGGCCCGTTGTTACCGCCATTCATCTGGTTCGCGCTGAAAACCGCGTTCTTTATGATGATGTTCATTTTGATTCGTGCGTCGTTACCGCGTCCGCGTTATGACCAGGTAATGTCCTTCGGCTGGAAAATCTGCCTGCCGCTGACGCTGATCAACTTGCTGGTAACGGCGGCTGTCATTCTCTGGCAGGCGCAATAA", - "dna_sequence_length": 978, - "functions": [ - "NADH:ubiquinone oxidoreductase, membrane subunit H" - ], - "id": "CDS_2267", - "location": [ - [ - "NC_000913", - 2397442, - "-", - 978 - ] - ], - "md5": "201a9d0531791923101d6b44b872daeb", - "parent_gene": "", - "protein_md5": "5e3d279c7a066adfaa3edd0db93e2633", - "protein_translation": "MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQAQ", - "protein_translation_length": 325, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2283" - ], - [ - "gene_synonym", - "ASAP:ABE-0007543" - ], - [ - "gene_synonym", - "GeneID:946762" - ], - [ - "gene_synonym", - "nuoG" - ], - [ - "gene_synonym", - "NP_416786.4" - ], - [ - "gene_synonym", - "JW2278" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33602" - ], - [ - "gene_synonym", - "GI:145698290" - ], - [ - "gene_synonym", - "EcoGene:EG12087" - ], - [ - "gene_synonym", - "ECK2277" - ] - ], - "dna_sequence": "ATGGCTACAATTCATGTAGACGGCAAAGAATACGAGGTCAACGGAGCGGACAACCTGCTGGAAGCTTGTCTGTCTCTGGGCCTTGATATTCCTTACTTTTGCTGGCATCCGGCGCTGGGAAGTGTCGGTGCTTGCCGCCAGTGTGCGGTGAAGCAATACCAAAACGCGGAAGACACGCGTGGTCGCCTGGTGATGTCCTGTATGACACCGGCTTCCGATGGCACCTTTATTTCCATTGACGACGAAGAAGCGAAACAGTTCCGTGAAAGCGTGGTCGAGTGGTTGATGACCAACCACCCGCACGACTGTCCGGTATGTGAAGAGGGCGGTAACTGCCATCTTCAGGATATGACTGTGATGACCGGACACAGCTTCCGTCGCTACCGTTTCACCAAACGTACCCACCGTAATCAGGATTTGGGGCCATTCATCTCTCACGAAATGAACCGCTGCATCGCCTGCTACCGCTGTGTGCGTTACTACAAAGATTACGCTGACGGTACAGATCTGGGCGTTTACGGTGCGCACGACAACGTCTACTTCGGTCGCCCGGAAGACGGCACGCTGGAAAGCGAATTTTCCGGTAACCTGGTCGAAATTTGCCCGACCGGCGTATTTACCGACAAAACGCACTCCGAGCGTTACAACCGTAAATGGGATATGCAGTTTGCGCCGAGCATCTGCCAGCAATGTTCCATCGGCTGTAACATCAGCCCCGGTGAACGTTACGGCGAACTGCGTCGTATCGAAAACCGTTACAACGGTACGGTAAACCACTACTTCCTCTGCGACCGTGGTCGTTTCGGTTACGGTTACGTCAACCTGAAGGATCGTCCGCGTCAGCCAGTACAGCGTCGTGGCGATGATTTCATTACCCTCAACGCCGAACAGGCAATGCAGGGCGCGGCAGATATTCTGCGTCAGTCGAAGAAAGTGATCGGTATTGGTTCTCCGCGTGCCAGCGTGGAAAGCAACTTTGCGCTGCGTGAACTGGTGGGCGAAGAAAACTTCTACACCGGTATCGCTCACGGTGAGCAGGAACGTCTGCAACTGGCGCTGAAAGTGCTGCGTGAAGGCGGCATTTATACTCCGGCTCTGCGCGAAATCGAATCTTACGATGCGGTACTGGTGCTGGGCGAAGACGTTACCCAGACCGGCGCGCGCGTCGCGCTGGCAGTGCGTCAGGCTGTGAAAGGTAAAGCGCGCGAAATGGCGGCAGCACAGAAAGTGGCTGACTGGCAGATTGCGGCAATCCTCAACATCGGTCAACGTGCGAAGCATCCGCTGTTTGTTACCAACGTTGATGACACCCGTCTGGATGATATCGCGGCGTGGACTTACCGCGCACCGGTTGAAGATCAGGCGCGTTTAGGTTTTGCCATCGCCCATGCGCTGGATAACTCTGCACCAGCGGTTGACGGTATCGAACCTGAGCTGCAAAGCAAAATCGACGTCATCGTGCAGGCACTGGCAGGTGCGAAGAAACCGTTGATTATCTCCGGGACGAACGCCGGTAGCTTAGAGGTGATTCAGGCGGCGGCTAACGTCGCGAAAGCCCTGAAAGGTCGCGGCGCTGACGTCGGTATCACCATGATTGCCCGTTCCGTCAACAGCATGGGGCTGGGCATTATGGGTGGCGGTTCGCTTGAAGAAGCGTTAACCGAACTGGAAACCGGACGCGCCGACGCGGTGGTGGTGTTGGAAAACGATCTGCATCGTCACGCTTCTGCTATCCGCGTGAATGCTGCGCTGGCTAAAGCACCGCTGGTGATGGTGGTTGATCATCAACGCACAGCGATTATGGAAAACGCCCATCTGGTACTTTCTGCTGCCAGCTTTGCTGAAAGCGACGGTACGGTGATCAACAACGAAGGCCGCGCCCAACGTTTCTTCCAGGTTTACGATCCTGCTTATTACGACAGCAAAACTGTCATGCTGGAAAGCTGGCGCTGGTTACACTCGCTGCACAGCACCCTGCTGAGCCGTGAAGTGGACTGGACGCAGCTCGACCATGTGATTGACGCTGTTGTGGCGAAAATCCCGGAACTGGCAGGTATCAAAGATGCTGCGCCGGATGCGACATTCCGTATTCGTGGGCAGAAACTGGCCCGTGAACCGCACCGTTACAGCGGTCGTACCGCCATGCGCGCCAATATCAGCGTTCATGAGCCGCGTCAGCCGCAGGATATTGACACCATGTTCACCTTCTCGATGGAAGGTAACAACCAGCCGACTGCGCACCGTTCGCAAGTGCCGTTTGCCTGGGCGCCGGGCTGGAACTCCCCGCAGGCGTGGAACAAATTCCAGGACGAAGTGGGCGGCAAACTGCGCTTTGGCGATCCGGGCGTGCGTCTGTTTGAAACCAGCGAAAATGGTCTGGATTACTTCACCAGCGTACCGGCACGCTTCCAGCCGCAGGACGGGAAATGGCGTATCGCGCCGTATTACCACCTGTTTGGCAGCGATGAATTGTCACAGCGTGCTCCGGTCTTCCAGAGCCGTATGCCGCAGCCGTACATCAAACTCAACCCAGCGGATGCCGCGAAGTTGGGTGTGAACGCAGGTACACGCGTCTCCTTTAGTTACGATGGCAACACGGTCACGCTGCCGGTTGAAATCGCCGAAGGACTGACGGCAGGGCAGGTGGGCTTGCCGATGGGTATGTCCGGCATTGCTCCGGTGCTGGCTGGCGCGCATCTTGAGGATCTCAAGGAGGCACAACAATGA", - "dna_sequence_length": 2727, - "functions": [ - "NADH:ubiquinone oxidoreductase, chain G" - ], - "id": "CDS_2268", - "location": [ - [ - "NC_000913", - 2400165, - "-", - 2727 - ] - ], - "md5": "f3fa8ffa7ac68a8748dbce015def2278", - "parent_gene": "", - "protein_md5": "0a97130d8b9dad338086f6a9716d89d4", - "protein_translation": "MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRYYKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRKWDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLKDRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASVESNFALRELVGEENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALAVRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAPVEDQARLGFAIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLEVIQAAANVAKALKGRGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVVLENDLHRHASAIRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNEGRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLLSREVDWTQLDHVIDAVVAKIPELAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDIDTMFTFSMEGNNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTSVPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYIKLNPADAAKLGVNAGTRVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHLEDLKEAQQ", - "protein_translation_length": 908, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946753" - ], - [ - "gene_synonym", - "b2284" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31979" - ], - [ - "gene_synonym", - "EcoGene:EG11774" - ], - [ - "gene_synonym", - "ASAP:ABE-0007545" - ], - [ - "gene_synonym", - "nuoB" - ], - [ - "gene_synonym", - "ECK2278" - ], - [ - "gene_synonym", - "nuoF" - ], - [ - "gene_synonym", - "NP_416787.1" - ], - [ - "gene_synonym", - "GI:16130219" - ], - [ - "gene_synonym", - "JW2279" - ] - ], - "dna_sequence": "ATGAAAAACATTATCCGTACTCCCGAAACGCATCCGCTGACCTGGCGTCTGCGCGATGACAAACAGCCAGTGTGGCTGGACGAATACCGCAGCAAAAACGGTTACGAAGGCGCGCGTAAGGCGCTGACCGGGCTGTCTCCGGACGAAATCGTTAATCAGGTAAAAGACGCTGGTCTGAAAGGGCGCGGCGGCGCGGGCTTCTCGACTGGCCTGAAATGGAGCCTGATGCCGAAAGACGAATCCATGAACATCCGTTACCTGCTGTGTAATGCCGATGAAATGGAGCCGGGCACCTATAAAGACCGCCTGTTGATGGAGCAACTGCCGCACCTGCTGGTGGAAGGTATGCTCATCTCCGCGTTTGCGCTGAAAGCTTACCGTGGCTACATCTTCCTGCGTGGCGAATATATCGAAGCGGCAGTTAATCTGCGCCGTGCCATTGCCGAAGCCACCGAAGCGGGTCTGCTTGGCAAAAACATTATGGGAACAGGTTTCGATTTCGAACTGTTCGTCCATACCGGGGCAGGGCGCTACATCTGCGGGGAAGAAACAGCGTTAATCAACTCCCTGGAAGGACGTCGTGCTAACCCACGCTCGAAGCCACCCTTCCCGGCAACCTCCGGCGCATGGGGTAAACCGACCTGTGTCAACAACGTCGAAACCCTGTGTAACGTTCCGGCGATCCTCGCTAACGGCGTGGAGTGGTATCAGAACATCTCGAAAAGTAAAGATGCTGGCACCAAGCTGATGGGCTTCTCCGGTCGGGTGAAAAATCCGGGACTGTGGGAACTGCCGTTCGGCACCACCGCACGCGAGATCCTCGAAGATTACGCCGGTGGTATGCGTGATGGTCTGAAATTTAAAGCCTGGCAGCCAGGCGGCGCGGGGACTGACTTCCTGACCGAAGCGCACCTTGATCTGCCGATGGAATTCGAAAGTATCGGTAAAGCGGGCAGCCGTCTGGGTACGGCGCTGGCGATGGCGGTTGACCATGAGATCAACATGGTGTCGCTGGTGCGTAACCTGGAAGAGTTTTTCGCCCGTGAGTCCTGCGGCTGGTGTACGCCGTGCCGCGACGGTCTGCCGTGGAGCGTGAAAATTCTGCGTGCGCTGGAGCGTGGTGAAGGTCAGCCGGGCGATATCGAAACACTTGAGCAACTGTGTCGATTCTTAGGCCCGGGTAAAACTTTCTGTGCCCACGCACCTGGTGCAGTGGAGCCGTTACAGAGCGCCATCAAATATTTCCGCGAAGAATTTGAGGCGGGAATCAAACAGCCGTTCAGCAATACCCATTTGATTAATGGGATTCAGCCGAACCTGCTGAAAGAGCGCTGGTAA", - "dna_sequence_length": 1338, - "functions": [ - "NADH:ubiquinone oxidoreductase, chain F" - ], - "id": "CDS_2269", - "location": [ - [ - "NC_000913", - 2401555, - "-", - 1338 - ] - ], - "md5": "fef3fe2d3bcf8033b56f60b142f13d43", - "parent_gene": "", - "protein_md5": "8e3a7a12de0eea1970dd81e9f4ab2ff7", - "protein_translation": "MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNIMGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW", - "protein_translation_length": 445, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2285" - ], - [ - "gene_synonym", - "GeneID:946746" - ], - [ - "gene_synonym", - "EcoGene:EG12086" - ], - [ - "gene_synonym", - "ASAP:ABE-0007547" - ], - [ - "gene_synonym", - "ECK2279" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFD1" - ], - [ - "gene_synonym", - "nuoE" - ], - [ - "gene_synonym", - "GI:16130220" - ], - [ - "gene_synonym", - "NP_416788.1" - ], - [ - "gene_synonym", - "JW2280" - ] - ], - "dna_sequence": "ATGCACGAGAATCAACAACCACAAACCGAGGCTTTTGAGCTGAGTGCGGCAGAGCGTGAAGCGATCGAGCACGAGATGCACCACTACGAAGACCCGCGTGCGGCGTCCATTGAAGCGCTGAAAATCGTTCAGAAGCAGCGTGGCTGGGTGCCGGATGGTGCGATCCACGCGATCGCCGATGTGCTGGGTATTCCGGCAAGCGACGTCGAAGGTGTGGCAACGTTCTACAGTCAGATCTTCCGCCAGCCGGTTGGTCGCCATGTGATCCGTTATTGTGACAGCGTGGTCTGTCATATCAACGGTTATCAGGGTATTCAGGCGGCGCTCGAGAAAAAGCTGAACATCAAACCAGGGCAAACGACATTTGATGGCCGCTTTACGCTGCTGCCAACTTGCTGCCTGGGGAACTGTGATAAAGGGCCAAACATGATGATCGATGAGGACACTCACGCGCATCTGACCCCGGAAGCGATCCCTGAACTGCTGGAGCGGTATAAATGA", - "dna_sequence_length": 501, - "functions": [ - "NADH:ubiquinone oxidoreductase, chain E" - ], - "id": "CDS_2270", - "location": [ - [ - "NC_000913", - 2402052, - "-", - 501 - ] - ], - "md5": "8da56d6c06ae2f62478472a3eac894b8", - "parent_gene": "", - "protein_md5": "f71f2fb7813aea0d11f312f70d3c5464", - "protein_translation": "MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQKQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPELLERYK", - "protein_translation_length": 166, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007549" - ], - [ - "gene_synonym", - "b2286" - ], - [ - "gene_synonym", - "JW5375" - ], - [ - "gene_synonym", - "ECK2280" - ], - [ - "gene_synonym", - "GeneID:946759" - ], - [ - "gene_synonym", - "nuoC" - ], - [ - "gene_synonym", - "NP_416789.2" - ], - [ - "gene_synonym", - "EcoGene:EG12084" - ], - [ - "gene_synonym", - "nuoD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33599" - ], - [ - "gene_synonym", - "GI:145698291" - ], - [ - "gene_synonym", - "nuoCD" - ] - ], - "dna_sequence": "ATGACCGACTTAACCGCGCAAGAACCCGCCTGGCAGACCCGCGATCATCTTGATGATCCGGTGATTGGCGAACTGCGCAACCGTTTTGGGCCGGATGCCTTTACTGTTCAGGCGACTCGCACCGGGGTTCCCGTTGTGTGGATCAAGCGTGAACAATTACTGGAAGTTGGCGATTTCTTAAAGAAACTGCCGAAACCTTACGTCATGCTGTTTGACTTACACGGCATGGACGAACGTCTGCGCACACACCGCGAAGGGTTACCTGCCGCGGATTTTTCCGTTTTCTACCATCTGATTTCTATCGATCGTAACCGCGACATCATGCTGAAGGTGGCGCTGGCAGAAAACGACCTGCACGTACCGACCTTCACCAAACTGTTCCCGAACGCTAACTGGTATGAGCGTGAAACCTGGGATCTGTTTGGCATTACTTTCGACGGTCACCCGAACCTGCGACGCATCATGATGCCGCAAACCTGGAAAGGTCACCCGCTGCGTAAAGATTATCCGGCGCGCGCTACCGAATTCTCGCCGTTTGAGCTGACCAAAGCCAAACAGGATCTGGAGATGGAAGCCCTGACCTTCAAACCGGAAGAGTGGGGGATGAAGCGCGGCACCGAAAACGAGGACTTCATGTTCCTCAACCTCGGTCCGAACCACCCGTCGGCGCACGGGGCTTTCCGTATCGTTTTGCAACTCGATGGCGAAGAGATTGTCGACTGCGTACCAGACATCGGTTACCACCACCGTGGTGCGGAGAAAATGGGCGAACGCCAGTCCTGGCACAGCTACATTCCGTATACTGACCGTATCGAATACCTCGGCGGCTGCGTTAACGAAATGCCTTACGTGCTGGCGGTAGAGAAACTGGCCGGGATCACCGTGCCGGATCGCGTTAACGTCATTCGCGTTATGCTCTCCGAACTGTTCCGCATCAACAGTCACCTGCTGTATATCTCGACCTTTATTCAGGACGTCGGCGCAATGACGCCAGTGTTCTTCGCCTTTACCGATCGTCAGAAAATTTACGATCTGGTGGAAGCAATCACTGGTTTCCGTATGCACCCGGCGTGGTTCCGTATTGGCGGCGTAGCGCACGACCTGCCGCGCGGCTGGGATCGCCTGCTGCGTGAGTTCCTCGACTGGATGCCGAAACGTCTGGCGTCTTACGAGAAAGCGGCGCTGCAAAACACCATTCTGAAAGGTCGTTCCCAGGGCGTTGCCGCCTATGGCGCGAAAGAGGCGCTGGAGTGGGGCACCACTGGCGCGGGCCTGCGTGCTACCGGGATCGACTTCGACGTGCGTAAGGCGCGTCCTTATTCTGGCTATGAAAACTTCGACTTTGAAATCCCGGTGGGTGGTGGCGTTTCTGACTGCTACACCCGCGTAATGCTTAAAGTGGAAGAGCTGCGCCAGAGTCTGCGCATTCTTGAGCAGTGCCTCAACAACATGCCGGAAGGCCCGTTCAAAGCGGATCACCCGCTGACCACGCCGCCGCCGAAAGAGCGCACGCTGCAACATATCGAAACCCTGATCACCCACTTCCTGCAAGTGTCGTGGGGTCCGGTGATGCCTGCCAATGAATCTTTCCAGATGATTGAGGCGACCAAAGGGATCAACAGTTACTACCTGACCAGCGACGGCAGCACCATGAGTTACCGCACCCGTGTTCGTACCCCGAGCTTTGCGCATTTGCAGCAAATTCCGGCGGCGATCCGCGGCAGCCTGGTGTCTGACCTGATTGTTTATCTGGGCAGTATCGATTTTGTTATGTCAGATGTGGACCGCTAA", - "dna_sequence_length": 1791, - "functions": [ - "NADH:ubiquinone oxidoreductase, fused CD subunit" - ], - "id": "CDS_2271", - "location": [ - [ - "NC_000913", - 2403845, - "-", - 1791 - ] - ], - "md5": "fec0f27c28532f51ed2726321c5f6e63", - "parent_gene": "", - "protein_md5": "262dfcac448e9bfa418aad6589081358", - "protein_translation": "MTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR", - "protein_translation_length": 596, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5875" - ], - [ - "gene_synonym", - "b2287" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFC7" - ], - [ - "gene_synonym", - "ECK2281" - ], - [ - "gene_synonym", - "ASAP:ABE-0007551" - ], - [ - "gene_synonym", - "GeneID:946738" - ], - [ - "gene_synonym", - "NP_416790.1" - ], - [ - "gene_synonym", - "nuoB" - ], - [ - "gene_synonym", - "EcoGene:EG12083" - ], - [ - "gene_synonym", - "GI:16130222" - ] - ], - "dna_sequence": "ATGGATTATACGCTCACCCGCATAGATCCCAACGGTGAGAACGACCGTTACCCCCTGCAAAAGCAGGAGATCGTAACCGACCCTCTGGAGCAAGAAGTTAACAAAAACGTGTTTATGGGCAAGCTCAATGACATGGTTAACTGGGGTCGTAAAAACTCAATTTGGCCGTATAACTTCGGTCTTTCCTGCTGTTACGTTGAGATGGTGACTTCGTTTACCGCGGTGCATGACGTGGCGCGTTTTGGCGCAGAAGTATTGCGTGCTTCGCCGCGTCAGGCTGACCTGATGGTGGTTGCAGGAACCTGCTTTACCAAAATGGCACCGGTTATTCAGCGTCTGTATGACCAGATGCTGGAACCAAAATGGGTTATCTCAATGGGTGCCTGTGCCAACTCTGGTGGTATGTACGATATTTATTCCGTTGTGCAGGGCGTCGATAAATTCATCCCGGTTGATGTGTATATCCCGGGCTGCCCGCCGCGTCCTGAAGCGTACATGCAGGCACTGATGCTGTTGCAGGAATCTATCGGCAAAGAACGTCGTCCGCTCTCCTGGGTGGTTGGCGATCAGGGCGTTTATCGCGCCAATATGCAATCAGAGCGCGAACGCAAGCGCGGTGAACGCATTGCCGTAACTAACCTGCGTACACCTGACGAGATTTAA", - "dna_sequence_length": 663, - "functions": [ - "NADH:ubiquinone oxidoreductase, chain B" - ], - "id": "CDS_2272", - "location": [ - [ - "NC_000913", - 2404613, - "-", - 663 - ] - ], - "md5": "8d62840e509397bb6aeacc89b95e67c9", - "parent_gene": "", - "protein_md5": "f9cf5ef975a24d6cd284ebce2bd80383", - "protein_translation": "MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDEI", - "protein_translation_length": 220, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFC3" - ], - [ - "gene_synonym", - "GI:49176207" - ], - [ - "gene_synonym", - "ASAP:ABE-0007553" - ], - [ - "gene_synonym", - "NP_416791.3" - ], - [ - "gene_synonym", - "ECK2282" - ], - [ - "gene_synonym", - "b2288" - ], - [ - "gene_synonym", - "nuoA" - ], - [ - "gene_synonym", - "EcoGene:EG12082" - ], - [ - "gene_synonym", - "GeneID:946764" - ], - [ - "gene_synonym", - "JW2283" - ] - ], - "dna_sequence": "ATGAGTATGTCAACATCCACTGAAGTCATCGCTCATCACTGGGCATTCGCTATCTTTCTTATCGTTGCCATTGGCCTGTGTTGCCTGATGCTGGTAGGCGGTTGGTTTTTAGGCGGTCGCGCACGCGCGAGGTCGAAAAACGTGCCGTTTGAATCCGGTATCGACTCGGTCGGCTCCGCCCGCTTACGCCTGTCCGCCAAGTTTTATCTGGTGGCCATGTTCTTCGTTATCTTCGACGTTGAAGCGCTGTATCTGTTCGCATGGTCAACCTCTATCCGCGAAAGCGGCTGGGTAGGCTTTGTGGAAGCTGCAATTTTTATTTTTGTGTTACTGGCAGGTCTGGTTTATCTGGTGCGTATTGGCGCGCTGGACTGGACGCCCGCGCGTTCACGCCGCGAGCGTATGAACCCGGAAACGAACAGTATCGCTAATCGTCAACGCTAA", - "dna_sequence_length": 444, - "functions": [ - "NADH:ubiquinone oxidoreductase, membrane subunit A" - ], - "id": "CDS_2273", - "location": [ - [ - "NC_000913", - 2405072, - "-", - 444 - ] - ], - "md5": "80f5e67ff72523ab515c8588114719b7", - "parent_gene": "", - "protein_md5": "3196ce19e8d8d88083060387212e6a7a", - "protein_translation": "MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARARSKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR", - "protein_translation_length": 147, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2284" - ], - [ - "gene_synonym", - "EcoGene:EG12123" - ], - [ - "gene_synonym", - "hexA" - ], - [ - "gene_synonym", - "b2289" - ], - [ - "gene_synonym", - "ECK2283" - ], - [ - "gene_synonym", - "genR" - ], - [ - "gene_synonym", - "ASAP:ABE-0007555" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36771" - ], - [ - "gene_synonym", - "GeneID:946769" - ], - [ - "gene_synonym", - "GI:16130224" - ], - [ - "gene_synonym", - "lrhA" - ], - [ - "gene_synonym", - "NP_416792.1" - ] - ], - "dna_sequence": "ATGATAAGTGCAAATCGTCCGATAATTAACCTCGACCTCGATCTGCTGAGAACATTTGTTGCTGTTGCCGATCTGAACACTTTTGCTGCCGCAGCTGCCGCTGTGTGTCGTACTCAGTCCGCCGTAAGTCAGCAAATGCAGCGTCTGGAACAACTCGTTGGGAAAGAACTGTTCGCTCGTCACGGTCGCAACAAACTGTTAACTGAACATGGCATTCAACTTCTTGGTTACGCCAGGAAAATCCTGCGTTTTAATGATGAGGCCTGCTCATCATTAATGTTCAGTAATCTTCAGGGCGTATTAACTATCGGTGCTTCAGATGAATCTGCCGATACGATCTTACCTTTCCTGTTAAATCGCGTGAGTTCGGTTTATCCGAAATTAGCGCTGGATGTCCGCGTTAAACGTAATGCCTATATGGCAGAAATGCTGGAATCCCAGGAAGTGGATTTGATGGTAACCACCCATCGTCCTTCAGCGTTTAAGGCATTGAACCTGCGTACCTCGCCAACACACTGGTACTGCGCAGCGGAATACATATTGCAAAAAGGCGAGCCGATCCCTCTTGTATTGCTGGATGATCCTAGCCCGTTTCGCGATATGGTGCTGGCGACGCTTAATAAAGCAGATATTCCATGGCGACTGGCTTATGTCGCCTCGACGCTTCCGGCCGTTCGTGCGGCAGTGAAAGCCGGTCTTGGCGTGACGGCAAGGCCGGTTGAGATGATGAGCCCGGACCTGCGTGTGCTGAGTGGAGTAGATGGCTTACCGCCGCTACCTGATACCGAATATTTGCTGTGCTATGATCCGTCCAGTAATAATGAGCTGGCCCAGGTGATCTATCAGGCGATGGAGAGCTACCATAATCCGTGGCAATACAGCCCAATGTCTGCTCCGGAAGGGGATGATTCATTGTTGATTGAAAGGGATATCGAGTAA", - "dna_sequence_length": 939, - "functions": [ - "transcriptional repressor of flagellar, motility and chemotaxis genes" - ], - "id": "CDS_2274", - "location": [ - [ - "NC_000913", - 2406641, - "-", - 939 - ] - ], - "md5": "0e782a8bb69cd277e33b6eb95b556458", - "parent_gene": "", - "protein_md5": "a845babf7dbfe03608d3270332b0e9a4", - "protein_translation": "MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLTIGASDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPEGDDSLLIERDIE", - "protein_translation_length": 312, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14101" - ], - [ - "gene_synonym", - "alaA" - ], - [ - "gene_synonym", - "b2290" - ], - [ - "gene_synonym", - "ECK2284" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A959" - ], - [ - "gene_synonym", - "ASAP:ABE-0007560" - ], - [ - "gene_synonym", - "GI:16130225" - ], - [ - "gene_synonym", - "JW2287" - ], - [ - "gene_synonym", - "NP_416793.1" - ], - [ - "gene_synonym", - "yfbQ" - ], - [ - "gene_synonym", - "GeneID:946772" - ] - ], - "dna_sequence": "ATGTCCCCCATTGAAAAATCCAGCAAATTAGAGAATGTCTGTTATGACATCCGTGGTCCGGTGCTGAAAGAAGCAAAACGCCTGGAAGAAGAAGGTAACAAGGTACTGAAACTGAACATCGGCAACCCAGCCCCGTTCGGTTTTGACGCGCCAGATGAAATCCTCGTTGACGTGATACGCAACCTGCCTACCGCTCAAGGGTATTGCGATTCCAAAGGTCTTTACTCCGCGCGTAAAGCCATCATGCAGCACTACCAGGCTCGTGGCATGCGTGATGTTACCGTGGAAGATATTTACATCGGCAATGGTGTATCGGAGCTTATCGTTCAGGCAATGCAGGCATTGCTGAACAGCGGGGACGAAATGTTGGTTCCTGCACCAGATTACCCACTCTGGACCGCGGCGGTTTCGCTTTCCAGCGGTAAAGCGGTGCATTATCTTTGCGATGAATCCTCTGACTGGTTCCCGGACCTCGATGATATTCGCGCTAAAATTACGCCTCGTACGCGTGGGATCGTTATTATCAACCCAAATAACCCAACCGGCGCGGTATATTCCAAAGAGCTTTTAATGGAGATTGTGGAGATTGCACGTCAGCATAATCTCATTATCTTCGCCGATGAAATTTATGACAAAATTCTCTACGACGACGCTGAGCATCACTCAATTGCGCCGCTGGCACCTGACCTGCTGACCATTACCTTTAACGGACTGTCGAAAACGTACCGCGTTGCAGGCTTCCGTCAGGGGTGGATGGTGTTGAACGGGCCGAAAAAACACGCCAAAGGCTACATCGAAGGTCTGGAAATGCTGGCTTCAATGCGCCTGTGTGCTAACGTTCCTGCGCAACACGCCATTCAGACCGCGCTAGGTGGTTATCAGAGCATCAGTGAATTTATTACCCCTGGCGGTCGTCTTTATGAGCAGCGTAACCGCGCGTGGGAACTGATCAACGATATTCCGGGCGTTTCCTGCGTGAAACCTCGTGGTGCGCTGTATATGTTCCCGAAAATCGACGCCAAACGCTTTAACATTCACGACGATCAGAAAATGGTGTTGGATTTCCTGTTGCAGGAAAAAGTTCTGTTGGTGCAAGGGACGGCATTCAACTGGCCGTGGCCGGATCACTTCCGCATTGTCACGCTACCGCGTGTCGATGATATCGAGCTGTCTTTGAGCAAGTTCGCGCGTTTCCTTTCTGGTTATCATCAGCTGTAA", - "dna_sequence_length": 1218, - "functions": [ - "glutamate-pyruvate aminotransferase", - "glutamic-pyruvic transaminase (GPT)", - "alanine transaminase" - ], - "id": "CDS_2275", - "location": [ - [ - "NC_000913", - 2407561, - "+", - 1218 - ] - ], - "md5": "8a5945d48cf58d750b97c902107c8bab", - "parent_gene": "", - "protein_md5": "f90d60219db6a32804d897d57c9f691e", - "protein_translation": "MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYMFPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSLSKFARFLSGYHQL", - "protein_translation_length": 405, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416794.1" - ], - [ - "gene_synonym", - "b2291" - ], - [ - "gene_synonym", - "ASAP:ABE-0007563" - ], - [ - "gene_synonym", - "ECK2285" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76491" - ], - [ - "gene_synonym", - "JW2288" - ], - [ - "gene_synonym", - "GeneID:946771" - ], - [ - "gene_synonym", - "yfbR" - ], - [ - "gene_synonym", - "GI:16130226" - ], - [ - "gene_synonym", - "EcoGene:EG14102" - ] - ], - "dna_sequence": "ATGAAACAGAGCCATTTTTTTGCCCATCTCTCCCGCCTGAAACTCATTAACCGCTGGCCGCTCATGCGCAACGTGCGGACGGAAAATGTGTCCGAACACAGTTTGCAGGTAGCGATGGTCGCCCATGCGCTGGCAGCTATCAAAAATCGAAAATTTGGCGGTAATGTCAACGCCGAACGTATCGCTTTACTGGCGATGTACCACGATGCCTCAGAAGTGCTCACCGGCGATCTCCCTACTCCGGTGAAATACTTCAATTCGCAAATCGCTCAGGAGTACAAGGCTATTGAAAAAATCGCTCAGCAAAAACTGGTCGATATGGTTCCGGAAGAGCTGCGGGATATCTTTGCGCCGTTAATTGACGAGCATGCATATAGCGATGAAGAAAAATCGCTGGTGAAACAGGCAGATGCACTGTGTGCATATCTGAAATGTCTGGAAGAACTCGCGGCCGGAAATAATGAATTCTTGCTGGCAAAAACGCGACTGGAAGCGACGCTTGAAGCGCGTCGCAGCCAGGAGATGGACTACTTCATGGAAATATTTGTTCCCAGCTTCCATCTTTCGCTCGATGAGATTAGCCAGGATTCACCGCTGTAA", - "dna_sequence_length": 600, - "functions": [ - "5'-nucleotidase" - ], - "id": "CDS_2276", - "location": [ - [ - "NC_000913", - 2408862, - "+", - 600 - ] - ], - "md5": "08d18fb0422eaa7cf4bda0aee467e787", - "parent_gene": "", - "protein_md5": "c76d5062861d24b3c113f7ddbf8a0690", - "protein_translation": "MKQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQEMDYFMEIFVPSFHLSLDEISQDSPL", - "protein_translation_length": 199, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFU2" - ], - [ - "gene_synonym", - "ASAP:ABE-0007565" - ], - [ - "gene_synonym", - "ECK2286" - ], - [ - "gene_synonym", - "NP_416795.1" - ], - [ - "gene_synonym", - "b2292" - ], - [ - "gene_synonym", - "JW2289" - ], - [ - "gene_synonym", - "yfbS" - ], - [ - "gene_synonym", - "GeneID:946766" - ], - [ - "gene_synonym", - "GI:16130227" - ], - [ - "gene_synonym", - "EcoGene:EG14103" - ] - ], - "dna_sequence": "GTGAACGGTGAATTGATTTGGGTTCTTTCATTACTGGCCGTTGCCATCGTCTTGTTTGCGACGGGCAGAGTGCGTATGGATGCGGTCGCTTTGTTTGTTATTGTCGCGTTTGCATTAAGCGGAACGCTGACAGTCCCAGAAGTATTTTCCGGCTTTTCTGATCCTAACGTTGTCCTGATTGCCGCCTTGTTTATTATTGGCGATGGTTTGGTCCGTACCGGTGTTGCCACCGTAATGGGAACATGGCTGGTCAAAGTTGCGGGCAATAGTGAAATCAAAATGTTGGTTTTGTTGATGCTGACCGTCGCGGGGCTTGGCGCGTTTATGAGTTCAACCGGCGTTGTCGCTATCTTTATTCCCGTGGTGTTAAGCGTTGCCATGCGTATGCAAACGTCGCCGTCACGTCTGATGATGCCGTTAAGTTTTGCCGGGCTGATTAGCGGCATGATGACGCTGGTGGCGACGCCGCCGAACCTGGTAGTCAACAGTGAATTGCTGCGTGAAGGCTATCACGGCTTCAGTTTCTTTAGCGTAACACCTATTGGCCTGGTCGTGCTGGTGCTGGGTATTTTGTATATGTTAGTGATGCGTTTCATGCTGAAAGGGGATACCCAGACCCCGCAGCGCGAAGGCTGGACGCGTCGAACCTTTCGCGATCTTATCCGTGAATATCGACTGACCGGGCGTGCGCGACGTCTGGCTATTCGCCCCGGATCGCCAATGATTGGTCAACGGCTGGATGATCTCAAATTACGTGAGCGTTATGGCGCTAACGTCATCGGTGTTGAACGCTGGCGGCGTTTTCGTCGCGTTATCGTGAACGTTAATGGGGTTTCTGAATTTCGCGCGCGTGACGTTTTGCTTATTGATATGTCTGCGGCTGATGTCGATCTCCGGCAATTTTGTAGTGAGCAATTGCTGGAGCCGATGGTACTGCGCGGCGAGTATTTTTCTGACCAGGCCCTTGATGTGGGCATGGCAGAGATTTCATTAATTCCTGAGTCAGAACTGATTGGTAAATCGGTGCGCGAAATTGGTTTTCGTACCCGCTACGGACTGAATGTGGTGGGGCTAAAGCGCAATGGCGTGGCGCTGGAAGGTTCGCTGGCGGATGAGCCTCTGCTGCTGGGCGATATCATCCTGGTTGTGGGTAACTGGAAACTGATCGGTATGCTGGCCAAACAGGGCCGCGACTTCGTAGCGCTGAACTTACCGGAAGAGGTGAGTGAAGCATCACCCGCGCACAGCCAGGCACCCCATGCCATTTTCTGTCTGGTGCTAATGGTGGCGTTAATGCTGACAGATGAAATTCCTAATCCTGTTGCCGCTATCATCGCCTGCCTGCTGATGGGGAAATTCCGCTGTATAGATGCTGAAAGCGCCTATAAATCCATTCACTGGCCGAGCATTATTTTGATCGTTGGGATGATGCCGTTTGCTGTGGCATTACAGAAAACGGGAGGTGTCGCGCTGGCGGTGAAAGGGCTGATGGACATTGGCGGTGGTTACGGGCCACATATGATGCTGGGGTGTTTGTTTGTCTTGTCGGCGGTTATTGGGCTATTTATCTCTAATACCGCGACGGCGGTGTTGATGGCTCCGATTGCGCTGGCTGCTGCCAAAACGATGGGGGTGTCGCCTTATCCATTCGCGATGGTCGTGGCGATGGCAGCATCCGCCGCCTTTATGACACCGGTTTCTTCACCTGTTAACACACTGGTTTTAGGTCCGGGAAATTACAGCTTCAGTGACTTTGTGAAGTTGGGGGTACCGTTCACCATTATCGTGATGGCGGTTTGTGTGGTGATGATCCCGATGCTGTTTCCGTTTTGA", - "dna_sequence_length": 1833, - "functions": [ - "putative transporter" - ], - "id": "CDS_2277", - "location": [ - [ - "NC_000913", - 2411352, - "-", - 1833 - ] - ], - "md5": "e0746d79b6b718ed179011f1b9f72d0d", - "parent_gene": "", - "protein_md5": "10298ea5d21948c62a550a04175db979", - "protein_translation": "MNGELIWVLSLLAVAIVLFATGRVRMDAVALFVIVAFALSGTLTVPEVFSGFSDPNVVLIAALFIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTVAGLGAFMSSTGVVAIFIPVVLSVAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLVVNSELLREGYHGFSFFSVTPIGLVVLVLGILYMLVMRFMLKGDTQTPQREGWTRRTFRDLIREYRLTGRARRLAIRPGSPMIGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVNGVSEFRARDVLLIDMSAADVDLRQFCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPESELIGKSVREIGFRTRYGLNVVGLKRNGVALEGSLADEPLLLGDIILVVGNWKLIGMLAKQGRDFVALNLPEEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPVAAIIACLLMGKFRCIDAESAYKSIHWPSIILIVGMMPFAVALQKTGGVALAVKGLMDIGGGYGPHMMLGCLFVLSAVIGLFISNTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAASAAFMTPVSSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAVCVVMIPMLFPF", - "protein_translation_length": 610, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5376" - ], - [ - "gene_synonym", - "ASAP:ABE-0007567" - ], - [ - "gene_synonym", - "GI:90111414" - ], - [ - "gene_synonym", - "b2293" - ], - [ - "gene_synonym", - "NP_416796.2" - ], - [ - "gene_synonym", - "GeneID:946777" - ], - [ - "gene_synonym", - "EcoGene:EG14104" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77625" - ], - [ - "gene_synonym", - "ECK2287" - ], - [ - "gene_synonym", - "yfbT" - ] - ], - "dna_sequence": "GTGCGGTGCAAAGGTTTTCTGTTTGATCTTGATGGAACGCTGGTGGATTCCCTGCCTGCGGTAGAACGGGCGTGGAGCAACTGGGCCAGACGTCATGGGTTAGCGCCGGAAGAGGTGCTGGCTTTCATTCACGGTAAACAGGCGATCACCTCTCTGCGCCATTTTATGGCGGGCAAATCCGAGGCTGATATTGCCGCCGAGTTTACGCGTCTGGAGCACATCGAGGCCACGGAAACCGAAGGTATTACCGCGCTTCCGGGGGCAATCGCCTTACTCAGTCATTTGAATAAAGCAGGTATTCCGTGGGCCATTGTGACTTCTGGCTCCATGCCGGTAGCGCGAGCGCGCCATAAAATAGCTGGGCTTCCCGCACCAGAGGTGTTTGTAACCGCTGAGCGAGTGAAGCGCGGAAAACCAGAACCTGATGCGTATCTGTTAGGCGCGCAGCTGCTGGGGCTTGCGCCGCAGGAGTGTGTGGTGGTGGAAGATGCTCCCGCTGGCGTGCTTTCTGGCCTGGCGGCGGGTTGTCATGTCATTGCGGTTAACGCTCCGGCAGATACCCCGCGCCTGAATGAGGTCGATTTGGTCCTCCACAGTCTGGAGCAAATTACTGTGACCAAACAGCCAAATGGCGATGTTATTATTCAGTGA", - "dna_sequence_length": 651, - "functions": [ - "sugar phosphatas" - ], - "id": "CDS_2278", - "location": [ - [ - "NC_000913", - 2412089, - "-", - 651 - ] - ], - "md5": "dc24c10b8fa0f062a54c5115f5ff2a6a", - "parent_gene": "", - "protein_md5": "eec6eb45a4899fa519a2d1c34e242de1", - "protein_translation": "MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIHGKQAITSLRHFMAGKSEADIAAEFTRLEHIEATETEGITALPGAIALLSHLNKAGIPWAIVTSGSMPVARARHKIAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLNEVDLVLHSLEQITVTKQPNGDVIIQ", - "protein_translation_length": 216, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2288" - ], - [ - "gene_synonym", - "b2294" - ], - [ - "gene_synonym", - "GI:90111415" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8W8" - ], - [ - "gene_synonym", - "ASAP:ABE-0007571" - ], - [ - "gene_synonym", - "JW2291" - ], - [ - "gene_synonym", - "yfbU" - ], - [ - "gene_synonym", - "GeneID:946767" - ], - [ - "gene_synonym", - "EcoGene:EG14105" - ], - [ - "gene_synonym", - "NP_416797.2" - ] - ], - "dna_sequence": "ATGGAAATGACCAACGCGCAACGTCTTATTTTGTCTAATCAGTACAAGATGATGACTATGCTCGATCCGGCAAATGCTGAACGTTACCGTCGCCTGCAAACAATTATTGAGCGTGGTTACGGATTACAGATGCGTGAATTGGATCGCGAGTTTGGCGAGCTGAAAGAAGAAACCTGCCGCACTATCATCGACATTATGGAGATGTATCATGCGTTGCATGTTTCCTGGTCTAATTTGCAGGACCAGCAATCCATCGATGAACGTCGTGTCACCTTCCTCGGCTTTGACGCCGCCACTGAAGCACGTTACCTCGGTTATGTCCGCTTTATGGTTAATGTGGAAGGGCGCTATACCCATTTTGACGCCGGAACTCACGGTTTTAACGCCCAGACGCCAATGTGGGAAAAATATCAGCGCATGCTTAATGTGTGGCATGCCTGCCCGCGTCAGTACCATTTGAGCGCCAACGAAATTAATCAAATTATCAATGCCTGA", - "dna_sequence_length": 495, - "functions": [ - "UPF0304 family protein" - ], - "id": "CDS_2279", - "location": [ - [ - "NC_000913", - 2412594, - "-", - 495 - ] - ], - "md5": "88e2376d0ad912c9e31e8e7f3105d0f5", - "parent_gene": "", - "protein_md5": "686577aac277f737d875fe198ea6460a", - "protein_translation": "MEMTNAQRLILSNQYKMMTMLDPANAERYRRLQTIIERGYGLQMRELDREFGELKEETCRTIIDIMEMYHALHVSWSNLQDQQSIDERRVTFLGFDAATEARYLGYVRFMVNVEGRYTHFDAGTHGFNAQTPMWEKYQRMLNVWHACPRQYHLSANEINQIINA", - "protein_translation_length": 164, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2289" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8D9" - ], - [ - "gene_synonym", - "b2295" - ], - [ - "gene_synonym", - "EcoGene:EG14106" - ], - [ - "gene_synonym", - "JW2292" - ], - [ - "gene_synonym", - "ASAP:ABE-0007575" - ], - [ - "gene_synonym", - "NP_416798.1" - ], - [ - "gene_synonym", - "GeneID:946774" - ], - [ - "gene_synonym", - "yfbV" - ], - [ - "gene_synonym", - "GI:16130230" - ] - ], - "dna_sequence": "ATGTCAACGCCGGATAATCGTTCTGTTAATTTTTTTAGCTTGTTTCGCCGGGGACAGCATTACTCAAAGACGTGGCCGCTGGAAAAACGCCTTGCCCCGGTCTTTGTCGAAAATCGCGTTATCAAGATGACGCGTTATGCGATCCGTTTTATGCCGCCGATCGCCGTATTTACTCTCTGCTGGCAGATTGCCCTGGGCGGTCAGCTTGGGCCGGCAGTTGCCACTGCCCTGTTCGCCTTAAGTTTACCCATGCAGGGATTGTGGTGGCTGGGCAAGCGTTCTGTCACGCCATTACCCCCTGCAATCCTTAACTGGTTTTATGAAGTTCGCGGTAAATTGCAGGAGTCTGGACAGGTGTTGGCACCCGTTGAAGGCAAGCCTGATTACCAGGCATTAGCTGACACGCTTAAGCGCGCCTTCAAACAACTGGATAAAACTTTCCTTGATGATTTGTAA", - "dna_sequence_length": 456, - "functions": [ - "UPF0208 family inner membrane protein" - ], - "id": "CDS_2280", - "location": [ - [ - "NC_000913", - 2413132, - "-", - 456 - ] - ], - "md5": "c546c0a31edd1e7fc686967c83ded1f2", - "parent_gene": "", - "protein_md5": "957393d58ba08f00c4dc8206d69808a0", - "protein_translation": "MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMTRYAIRFMPPIAVFTLCWQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAILNWFYEVRGKLQESGQVLAPVEGKPDYQALADTLKRAFKQLDKTFLDDL", - "protein_translation_length": 151, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ackA" - ], - [ - "gene_synonym", - "JW2293" - ], - [ - "gene_synonym", - "b2296" - ], - [ - "gene_synonym", - "ECK2290" - ], - [ - "gene_synonym", - "NP_416799.1" - ], - [ - "gene_synonym", - "EcoGene:EG10027" - ], - [ - "gene_synonym", - "ASAP:ABE-0007579" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6A3" - ], - [ - "gene_synonym", - "GeneID:946775" - ], - [ - "gene_synonym", - "GI:16130231" - ] - ], - "dna_sequence": "ATGTCGAGTAAGTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCTGCCCGAAGCACGTATCAAATGGAAAATGGACGGCAATAAACAGGAAGCGGCTTTAGGTGCAGGCGCCGCTCACAGCGAAGCGCTCAACTTTATCGTTAATACTATTCTGGCACAAAAACCAGAACTGTCTGCGCAGCTGACTGCTATCGGTCACCGTATCGTACACGGCGGCGAAAAGTATACCAGCTCCGTAGTGATCGATGAGTCTGTTATTCAGGGTATCAAAGATGCAGCTTCTTTTGCACCGCTGCACAACCCGGCTCACCTGATCGGTATCGAAGAAGCTCTGAAATCTTTCCCACAGCTGAAAGACAAAAACGTTGCTGTATTTGACACCGCGTTCCACCAGACTATGCCGGAAGAGTCTTACCTCTACGCCCTGCCTTACAACCTGTACAAAGAGCACGGCATCCGTCGTTACGGCGCGCACGGCACCAGCCACTTCTATGTAACCCAGGAAGCGGCAAAAATGCTGAACAAACCGGTAGAAGAACTGAACATCATCACCTGCCACCTGGGCAACGGTGGTTCCGTTTCTGCTATCCGCAACGGTAAATGCGTTGACACCTCTATGGGCCTGACCCCGCTGGAAGGTCTGGTCATGGGTACCCGTTCTGGTGATATCGATCCGGCGATCATCTTCCACCTGCACGACACCCTGGGCATGAGCGTTGACGCAATCAACAAACTGCTGACCAAAGAGTCTGGCCTGCTGGGTCTGACCGAAGTGACCAGCGACTGCCGCTATGTTGAAGACAACTACGCGACGAAAGAAGACGCGAAGCGCGCAATGGACGTTTACTGCCACCGCCTGGCGAAATACATCGGTGCCTACACTGCGCTGATGGATGGTCGTCTGGACGCTGTTGTATTCACTGGTGGTATCGGTGAAAATGCCGCAATGGTTCGTGAACTGTCTCTGGGCAAACTGGGCGTGCTGGGCTTTGAAGTTGATCATGAACGCAACCTGGCTGCACGTTTCGGCAAATCTGGTTTCATCAACAAAGAAGGTACCCGTCCTGCGGTGGTTATCCCAACCAACGAAGAACTGGTTATCGCGCAAGACGCGAGCCGCCTGACTGCCTGA", 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- "GeneID:946778" - ], - [ - "gene_synonym", - "JW2294" - ], - [ - "gene_synonym", - "pta" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9M8" - ], - [ - "gene_synonym", - "GI:16130232" - ], - [ - "gene_synonym", - "ASAP:ABE-0007582" - ] - ], - "dna_sequence": "GTGTCCCGTATTATTATGCTGATCCCTACCGGAACCAGCGTCGGTCTGACCAGCGTCAGCCTTGGCGTGATCCGTGCAATGGAACGCAAAGGCGTTCGTCTGAGCGTTTTCAAACCTATCGCTCAGCCGCGTACCGGTGGCGATGCGCCCGATCAGACTACGACTATCGTGCGTGCGAACTCTTCCACCACGACGGCCGCTGAACCGCTGAAAATGAGCTACGTTGAAGGTCTGCTTTCCAGCAATCAGAAAGATGTGCTGATGGAAGAGATCGTCGCAAACTACCACGCTAACACCAAAGACGCTGAAGTCGTTCTGGTTGAAGGTCTGGTCCCGACACGTAAGCACCAGTTTGCCCAGTCTCTGAACTACGAAATCGCTAAAACGCTGAATGCGGAAATCGTCTTCGTTATGTCTCAGGGCACTGACACCCCGGAACAGCTGAAAGAGCGTATCGAACTGACCCGCAACAGCTTCGGCGGTGCCAAAAACACCAACATCACCGGCGTTATCGTTAACAAACTGAACGCACCGGTTGATGAACAGGGTCGTACTCGCCCGGATCTGTCCGAGATTTTCGACGACTCTTCCAAAGCTAAAGTAAACAATGTTGATCCGGCGAAGCTGCAAGAATCCAGCCCGCTGCCGGTTCTCGGCGCTGTGCCGTGGAGCTTTGACCTGATCGCGACTCGTGCGATCGATATGGCTCGCCACCTGAATGCGACCATCATCAACGAAGGCGACATCAATACTCGCCGCGTTAAATCCGTCACTTTCTGCGCACGCAGCATTCCGCACATGCTGGAGCACTTCCGTGCCGGTTCTCTGCTGGTGACTTCCGCAGACCGTCCTGACGTGCTGGTGGCCGCTTGCCTGGCAGCCATGAACGGCGTAGAAATCGGTGCCCTGCTGCTGACTGGCGGTTACGAAATGGACGCGCGCATTTCTAAACTGTGCGAACGTGCTTTCGCTACCGGCCTGCCGGTATTTATGGTGAACACCAACACCTGGCAGACCTCTCTGAGCCTGCAGAGCTTCAACCTGGAAGTTCCGGTTGACGATCACGAACGTATCGAGAAAGTTCAGGAATACGTTGCTAACTACATCAACGCTGACTGGATCGAATCTCTGACTGCCACTTCTGAGCGCAGCCGTCGTCTGTCTCCGCCTGCGTTCCGTTATCAGCTGACTGAACTTGCGCGCAAAGCGGGCAAACGTATCGTACTGCCGGAAGGTGACGAACCGCGTACCGTTAAAGCAGCCGCTATCTGTGCTGAACGTGGTATCGCAACTTGCGTACTGCTGGGTAATCCGGCAGAGATCAACCGTGTTGCAGCGTCTCAGGGTGTAGAACTGGGTGCAGGGATTGAAATCGTTGATCCAGAAGTGGTTCGCGAAAGCTATGTTGGTCGTCTGGTCGAACTGCGTAAGAACAAAGGCATGACCGAAACCGTTGCCCGCGAACAGCTGGAAGACAACGTGGTGCTCGGTACGCTGATGCTGGAACAGGATGAAGTTGATGGTCTGGTTTCCGGTGCTGTTCACACTACCGCAAACACCATCCGTCCGCCGCTGCAGCTGATCAAAACTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAACCCGGATCCGACCGCTGAACAGCTGGCAGAAATCGCGATTCAGTCCGCTGATTCCGCTGCGGCCTTCGGTATCGAACCGCGCGTTGCTATGCTCTCCTACTCCACCGGTACTTCTGGTGCAGGTAGCGACGTAGAAAAAGTTCGCGAAGCAACTCGTCTGGCGCAGGAAAAACGTCCTGACCTGATGATCGACGGTCCGCTGCAGTACGACGCTGCGGTAATGGCTGACGTTGCGAAATCCAAAGCGCCGAACTCTCCGGTTGCAGGTCGCGCTACCGTGTTCATCTTCCCGGATCTGAACACCGGTAACACCACCTACAAAGCGGTACAGCGTTCTGCCGACCTGATCTCCATCGGGCCGATGCTGCAGGGTATGCGCAAGCCGGTTAACGACCTGTCCCGTGGCGCACTGGTTGACGATATCGTCTACACCATCGCGCTGACTGCGATTCAGTCTGCACAGCAGCAGTAA", 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"MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRTGGDAPDQTTTIVRANSSTTTAAEPLKMSYVEGLLSSNQKDVLMEEIVANYHANTKDAEVVLVEGLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQLKERIELTRNSFGGAKNTNITGVIVNKLNAPVDEQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVLGAVPWSFDLIATRAIDMARHLNATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSLLVTSADRPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNTNTWQTSLSLQSFNLEVPVDDHERIEKVQEYVANYINADWIESLTATSERSRRLSPPAFRYQLTELARKAGKRIVLPEGDEPRTVKAAAICAERGIATCVLLGNPAEINRVAASQGVELGAGIEIVDPEVVRESYVGRLVELRKNKGMTETVAREQLEDNVVLGTLMLEQDEVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQLAEIAIQSADSAAAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGPLQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQGMRKPVNDLSRGALVDDIVYTIALTAIQSAQQQ", - "protein_translation_length": 714, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2298" - ], - [ - "gene_synonym", - "NP_416801.2" - ], - [ - "gene_synonym", - "ECK2292" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39263" - ], - [ - "gene_synonym", - "yfcC" - ], - [ - "gene_synonym", - "GI:90111416" - ], - [ - "gene_synonym", - "EcoGene:EG12607" - ], - [ - "gene_synonym", - "JW2295" - ], - [ - "gene_synonym", - "ASAP:ABE-0007585" - ], - [ - "gene_synonym", - "GeneID:946780" - ] - ], - "dna_sequence": "ATGTCCGCAATCACTGAATCCAAACCAACAAGAAGATGGGCAATGCCCGATACGTTGGTGATTATCTTTTTTGTTGCTATTTTAACCAGCCTTGCCACCTGGGTAGTTCCGGTGGGGATGTTTGACAGTCAGGAAGTGCAGTATCAGGTTGATGGTCAAACAAAAACACGCAAAGTCGTAGATCCACACTCATTTCGCATTCTGACTAACGAAGCAGGCGAACCTGAGTATCACCGCGTACAGCTGTTCACGACGGGCGATGAACGCCCGGGCCTGATGAACTTCCCGTTTGAAGGATTAACCTCAGGATCGAAATACGGGACAGCCGTTGGCATCATCATGTTTATGCTGGTGATTGGCGGCGCGTTTGGCATTGTGATGCGTACAGGAACCATTGATAACGGTATCCTGGCGCTTATTCGCCATACCCGCGGGAATGAAATTCTCTTTATTCCTGCGCTGTTTATTCTGTTTTCACTTGGCGGCGCGGTATTTGGTATGGGAGAAGAGGCCGTCGCCTTTGCCATTATCATCGCACCGCTAATGGTCCGGCTGGGCTATGACAGTATTACCACCGTCCTGGTGACCTATATTGCCACGCAAATCGGTTTTGCCAGTTCGTGGATGAACCCGTTTTGTGTGGTCGTTGCTCAGGGGATTGCCGGCGTTCCGGTGCTTTCTGGCTCCGGGTTGCGCATCGTGGTGTGGGTTATCGCCACTCTGATTGGCCTGATCTTTACCATGGTGTACGCCTCACGAGTGAAAAAGAATCCTCTTCTGTCACGCGTGCATGAGTCCGACCGCTTCTTTCGTGAAAAGCAGGCTGATGTTGAACAACGTCCGTTTACCTTTGGTGACTGGCTGGTATTGATTGTCCTGACCGCCGTAATGGTCTGGGTGATTTGGGGCGTGATCGTTAATGCCTGGTTTATTCCAGAAATTGCCAGCCAGTTCTTCACCATGGGTCTGGTGATTGGCATCATCGGCGTTGTTTTCCGCCTTAACGGCATGACGGTTAATACCATGGCTTCATCCTTTACCGAAGGGGCGCGAATGATGATCGCCCCTGCCCTGCTGGTGGGTTTCGCCAAAGGGATTTTGCTGCTGGTCGGTAATGGTGAAGCGGGTGATGCCAGCGTGTTAAATACCATCCTCAACAGCATTGCCAATGCCATTAGCGGTCTGGACAACGCGGTCGCGGCCTGGTTTATGTTGCTCTTCCAGGCGGTATTTAATTTCTTCGTGACGTCCGGTTCTGGTCAGGCGGCGTTAACCATGCCGTTACTGGCACCGCTTGGCGATCTGGTCGGTGTTAACCGTCAGGTTACCGTGCTGGCGTTCCAGTTTGGTGATGGCTTCAGTCACATCATTTACCCAACCTCAGCGTCGTTAATGGCAACGCTCGGTGTGTGCAGGGTGGACTTCCGTAACTGGCTGAAGGTGGGCGCGACCCTACTTGGACTGCTGTTTATTATGTCCAGCGTCGTAGTGATCGGCGCTCAGTTGATGGGCTACCACTAA", 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"ASAP:ABE-0007587" - ], - [ - "gene_synonym", - "b2299" - ], - [ - "gene_synonym", - "ECK2293" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P65556" - ], - [ - "gene_synonym", - "EcoGene:EG14107" - ], - [ - "gene_synonym", - "yfcD" - ], - [ - "gene_synonym", - "GeneID:946783" - ], - [ - "gene_synonym", - "JW2296" - ], - [ - "gene_synonym", - "GI:16130234" - ], - [ - "gene_synonym", - "NP_416802.1" - ] - ], - "dna_sequence": "ATGGAACAGCGTCGTTTGGCAAGTACTGAATGGGTGGATATTGTCAATGAAGAGAACGAAGTCATTGCACAAGCCAGCCGGGAACAAATGCGGGCACAGTGTCTGCGTCATCGTGCAACTTACATCGTCGTGCATGATGGCATGGGCAAAATTCTGGTCCAGCGTCGTACCGAGACAAAAGACTTTTTACCCGGCATGTTAGATGCGACCGCAGGCGGTGTAGTCCAGGCCGATGAGCAACTGCTGGAATCCGCGCGTCGCGAAGCGGAAGAAGAGTTGGGCATTGCCGGTGTCCCCTTTGCCGAGCACGGGCAGTTCTATTTCGAAGATAAAAATTGCCGTGTCTGGGGCGCATTGTTCAGCTGCGTCTCTCACGGTCCCTTCGCACTACAGGAAGATGAAGTCAGTGAAGTTTGCTGGCTGACGCCGGAAGAAATCACCGCACGCTGCGATGAGTTCACTCCAGACTCGCTGAAAGCGCTAGCGTTGTGGATGAAGCGCAATGCCAAAAATGAAGCCGTAGAGACTGAAACGGCAGAATGA", - "dna_sequence_length": 543, - "functions": [ - "putative NUDIX hydrolase" - ], - "id": "CDS_2284", - "location": [ - [ - "NC_000913", - 2419176, - "-", - 543 - ] - ], - "md5": "8f63c8f18ed036a81841748837a75a5d", - "parent_gene": "", - "protein_md5": "53125c9d93bd98e258222dccef54316e", - "protein_translation": "MEQRRLASTEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGQFYFEDKNCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMKRNAKNEAVETETAE", - "protein_translation_length": 180, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2300" - ], - [ - "gene_synonym", - "JW5377" - ], - [ - "gene_synonym", - "GeneID:946755" - ], - [ - "gene_synonym", - "GI:49176208" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67095" - ], - [ - "gene_synonym", - "yfcE" - ], - [ - "gene_synonym", - "ECK2294" - ], - [ - "gene_synonym", - "ASAP:ABE-0007589" - ], - [ - "gene_synonym", - "NP_416803.3" - ], - [ - "gene_synonym", - "EcoGene:EG14108" - ] - ], - "dna_sequence": "GTGATGAAACTGATGTTTGCATCGGACATTCATGGGTCGTTACCGGCGACGGAACGTGTTCTGGAGTTGTTTGCCCAAAGCGGTGCCCAGTGGCTGGTGATCCTTGGCGACGTGTTGAATCACGGCCCGCGTAATGCTTTACCGGAGGGTTACGCGCCAGCCAAAGTCGCTGAACGGCTTAATGAAGTGGCACATAAGGTTATCGCTGTGCGCGGCAACTGCGACAGCGAAGTGGATCAAATGCTGCTGCATTTCCCGATAACCGCGCCGTGGCAACAGGTATTACTGGAAAAACAACGTCTGTTTTTGACGCATGGTCATCTTTTTGGCCCGGAAAATCTGCCTGCTTTAAACCAGAACGATGTGCTGGTGTACGGTCATACCCATCTGCCAGTGGCAGAACAGCGGGGGGAGATTTTCCACTTCAACCCCGGCTCGGTGAGTATTCCGAAAGGCGGTAATCCGGCGAGTTATGGCATGCTGGATAATGACGTACTTAGTGTAATCGCACTCAATGATCAAAGTATCATTGCGCAGGTCGCGATTAATCCGTAA", - "dna_sequence_length": 555, - "functions": [ - "phosphodiesterase activity on bis-pNPP" - ], - "id": "CDS_2285", - "location": [ - [ - "NC_000913", - 2419788, - "-", - 555 - ] - ], - "md5": "d53af8beb61bb9387170b3046013f657", - "parent_gene": "", - "protein_md5": "d9895c3133fa551ccc9ea33628f5fd58", - "protein_translation": "MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGPENLPALNQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGGNPASYGMLDNDVLSVIALNDQSIIAQVAINP", - "protein_translation_length": 184, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416804.1" - ], - [ - "gene_synonym", - "b2301" - ], - [ - "gene_synonym", - "EcoGene:EG14109" - ], - [ - "gene_synonym", - "GeneID:946749" - ], - [ - "gene_synonym", - "ECK2295" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77544" - ], - [ - "gene_synonym", - "yfcF" - ], - [ - "gene_synonym", - "JW2298" - ], - [ - "gene_synonym", - "GI:16130236" - ], - [ - "gene_synonym", - "ASAP:ABE-0007593" - ] - ], - "dna_sequence": "ATGAGTAAACCCGCTATCACGCTTTGGTCAGATGCCCACTTTTTCTCCCCTTATGTGTTATCCGCCTGGGTGGCGTTGCAGGAAAAAGGCCTGTCGTTTCATATCAAGACCATCGACCTCGACAGCGGTGAACATTTGCAGCCGACGTGGCAAGGTTACGGTCAGACACGCCGTGTGCCGTTATTACAAATCGATGATTTTGAGTTGAGTGAATCTTCTGCCATTGCGGAGTATCTGGAAGATCGATTTGCGCCACCGACCTGGGAACGTATTTATCCGCTTGATTTAGAAAATCGTGCGCGTGCACGACAGATTCAGGCCTGGCTGCGCAGCGATCTGATGCCCATCCGCGAAGAGCGTCCGACGGATGTTGTCTTTGCGGGGGCGAAAAAAGCGCCACTAACGGCCGAGGGAAAAGCCAGTGCAGAGAAACTGTTCGCGATGGCAGAACATTTGTTAGTACTGGGTCAGCCGAATTTATTTGGTGAATGGTGCATTGCTGATACTGATCTGGCGCTAATGATTAACCGCCTGGTACTACATGGCGATGAGGTGCCAGAACGCCTGGTGGATTATGCAACATTCCAGTGGCAGCGAGCGTCTGTCCAGCGTTTTATTGCACTTTCGGCGAAGCAATCTGGCTGA", - "dna_sequence_length": 645, - "functions": [ - "glutathione S-transferase" - ], - "id": "CDS_2286", - "location": [ - [ - "NC_000913", - 2420485, - "-", - 645 - ] - ], - "md5": "32b6bbe13393238db25715a2d50d28d6", - "parent_gene": "", - "protein_md5": "b559359a9c6050f5effc7e3156227d89", - "protein_translation": "MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASAEKLFAMAEHLLVLGQPNLFGEWCIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG", - "protein_translation_length": 214, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2302" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77526" - ], - [ - "gene_synonym", - "EcoGene:EG14110" - ], - [ - "gene_synonym", - "ECK2296" - ], - [ - "gene_synonym", - "NP_416805.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007600" - ], - [ - "gene_synonym", - "GI:16130237" - ], - [ - "gene_synonym", - "JW2299" - ], - [ - "gene_synonym", - "yfcG" - ], - [ - "gene_synonym", - "GeneID:946763" - ] - ], - "dna_sequence": "ATGATCGATCTCTATTTCGCCCCGACACCCAATGGTCACAAAATTACGCTGTTTCTCGAAGAAGCAGAGCTGGATTATCGCTTGATTAAGGTAGACCTGGGGAAAGGCGGTCAGTTTCGTCCGGAATTTTTGCGCATTTCGCCCAACAACAAAATTCCGGCAATTGTTGATCATTCTCCTGCCGATGGCGGCGAACCGCTAAGCCTCTTTGAGTCTGGTGCCATTTTGTTGTATCTGGCTGAGAAAACAGGACTCTTTTTGAGTCATGAAACGCGTGAGCGCGCCGCCACATTACAGTGGTTATTCTGGCAGGTAGGCGGACTGGGGCCGATGCTTGGGCAAAATCATCATTTTAATCACGCAGCCCCCCAAACCATTCCTTACGCTATTGAACGTTATCAGGTTGAAACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAA", - "dna_sequence_length": 648, - "functions": [ - "GSH-dependent disulfide bond oxidoreductase" - ], - "id": "CDS_2287", - "location": [ - [ - "NC_000913", - 2420621, - "+", - 648 - ] - ], - "md5": "84e775333d494aab883045d21fec07ff", - "parent_gene": "", - "protein_md5": "9a5315fcb6bb866a2abd9ab28f13a3d9", - "protein_translation": "MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS", - "protein_translation_length": 215, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2303" - ], - [ - "gene_synonym", - "ASAP:ABE-0007603" - ], - [ - "gene_synonym", - "ECK2297" - ], - [ - "gene_synonym", - "folX" - ], - [ - "gene_synonym", - "JW2300" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC19" - ], - [ - "gene_synonym", - "NP_416806.1" - ], - [ - "gene_synonym", - "EcoGene:EG14263" - ], - [ - "gene_synonym", - "GeneID:946781" - ], - [ - "gene_synonym", - "GI:16130238" - ] - ], - "dna_sequence": "ATGGCACAACCTGCCGCTATTATTCGTATAAAGAACCTTCGTTTGCGTACGTTTATCGGAATTAAGGAAGAAGAAATTAACAACCGTCAGGATATTGTTATCAATGTGACGATCCACTACCCCGCCGATAAAGCGCGCACTAGCGAAGATATCAACGATGCGCTGAATTATCGCACCGTAACGAAAAACATTATTCAGCATGTAGAGAATAACCGTTTCTCTTTGCTGGAAAAATTAACTCAGGATGTGCTCGATATCGCACGTGAACATCACTGGGTGACGTATGCTGAAGTGGAGATCGATAAACTGCACGCGCTGCGCTACGCCGATTCGGTATCCATGACCTTAAGCTGGCAGCGTTAA", - "dna_sequence_length": 363, - "functions": [ - "D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase" - ], - "id": "CDS_2288", - "location": [ - [ - "NC_000913", - 2421325, - "+", - 363 - ] - ], - "md5": "d185751e03df6c8fa55ac12a67ab4aa5", - "parent_gene": "", - "protein_md5": "9c56481195c0a84887bc132b90327655", - "protein_translation": "MAQPAAIIRIKNLRLRTFIGIKEEEINNRQDIVINVTIHYPADKARTSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDKLHALRYADSVSMTLSWQR", - "protein_translation_length": 120, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfcH" - ], - [ - "gene_synonym", - "ECK2298" - ], - [ - "gene_synonym", - "b2304" - ], - [ - "gene_synonym", - "ASAP:ABE-0007605" - ], - [ - "gene_synonym", - "EcoGene:EG14111" - ], - [ - "gene_synonym", - "JW2301" - ], - [ - "gene_synonym", - "GeneID:946784" - ], - [ - "gene_synonym", - "GI:16130239" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77775" - ], - [ - "gene_synonym", - "NP_416807.1" - ] - ], - "dna_sequence": "ATGAACATAGTGATCACCGGAGGGACAGGATTAATTGGTCGCCATTTGATTCCGCGTTTGCTGGAGCTGGGCCATCAAATTACGGTAGTGACGCGTAACCCGCAGAAAGCCAGTTCCGTTCTCGGCCCTCGGGTGACACTATGGCAAGGGCTTGCCGATCAAAGCAACCTCAACGGCGTTGATGCGGTAATCAACCTGGCCGGAGAACCGATTGCTGATAAACGCTGGACTCACGAGCAAAAAGAGCGTCTCTGCCAAAGCCGCTGGAATATCACGCAAAAACTGGTCGATTTGATTAATGCCAGCGACACGCCACCGTCGGTACTCATTTCCGGCTCGGCAACGGGCTATTATGGTGACTTAGGTGAAGTGGTGGTTACCGAAGAGGAACCGCCGCATAACGAATTTACCCATAAACTCTGCGCTCGCTGGGAAGAAATTGCCTGCCGGGCGCAAAGTGACAAAACGCGAGTGTGCCTGCTGCGTACCGGTGTAGTGCTGGCACCGGATGGCGGTATTCTCGGTAAAATGCTGCCGCCGTTTCGTCTTGGCCTGGGCGGGCCGATTGGCTCTGGTCGGCAGTATCTGGCCTGGATTCATATTGATGATATGGTCAACGGTATTCTCTGGCTGCTGGATAACGAGCTGCGCGGGCCATTTAATATGGTTTCGCCCTACCCGGTACGCAATGAACAATTTGCCCATGCGCTCGGTCATGCGCTGCATCGCCCGGCCATTTTGCGCGTCCCCGCGACCGCCATTCGACTGTTAATGGGCGAATCTTCAGTACTGGTATTAGGTGGACAACGCGCGCTGCCTAAACGGCTGGAAGAAGCGGGTTTTGCGTTTCGCTGGTACGATTTAGAAGAGGCGCTGGCGGATGTCGTTCGCTGA", - "dna_sequence_length": 894, - "functions": [ - "putative NAD-dependent nucleotide-sugar epimerase" - ], - "id": "CDS_2289", - "location": [ - [ - "NC_000913", - 2421708, - "+", - 894 - ] - ], - "md5": "6325bff1c4d564d8723a9529ffa5f41f", - "parent_gene": "", - "protein_md5": "12cdbbf29c934869d738de98dec2670d", - "protein_translation": "MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLGPRVTLWQGLADQSNLNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASDTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDGGILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDNELRGPFNMVSPYPVRNEQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFAFRWYDLEEALADVVR", - "protein_translation_length": 297, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfcI" - ], - [ - "gene_synonym", - "ECK2299" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77768" - ], - [ - "gene_synonym", - "b2305" - ], - [ - "gene_synonym", - "ASAP:ABE-0007607" - ], - [ - "gene_synonym", - "JW2302" - ], - [ - "gene_synonym", - "EcoGene:EG14112" - ], - [ - "gene_synonym", - "GeneID:946787" - ], - [ - "gene_synonym", - "NP_416808.1" 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"functions": [ - "transposase_31 family protein" - ], - "id": "CDS_2290", - "location": [ - [ - "NC_000913", - 2423539, - "-", - 891 - ] - ], - "md5": "040809927d18c3a1248632c65cad7fb6", - "parent_gene": "", - "protein_md5": "76ed7ed45f8dc1f280dd497d5ce3c6b7", - "protein_translation": "MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTTLKLEPNSFIDEDLRQYYSDLLWSVKTQEGVGYIYVVIEHQSKPEELMAFRMMRYSIAAMQNHLDAGYKELPLVLPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSAFPLVDITVVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLKALFNYVLQTGDAQRFRAFIGEIAERAPQEKEKLMTIADRLREEGAMQGKHEEALRIAQEMLDRGLDRELVMMVTRLSPDDLIAQSH", - "protein_translation_length": 296, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2306" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07109" - ], - [ - "gene_synonym", - "ASAP:ABE-0007610" - ], - [ - "gene_synonym", - "JW2303" - ], - [ - "gene_synonym", - "EcoGene:EG10452" - ], - [ - "gene_synonym", - "NP_416809.1" - ], - [ - "gene_synonym", - "hisP" - ], - [ - "gene_synonym", - "ECK2300" - ], - [ - "gene_synonym", - "GI:16130241" - ], - [ - "gene_synonym", - "GeneID:946789" - ] - ], - "dna_sequence": "ATGTCCGAGAATAAATTAAACGTTATCGATTTGCACAAACGCTACGGCGAACATGAAGTGCTGAAAGGGGTATCACTGCAAGCGAATGCCGGAGATGTAATAAGCATCATCGGATCGTCGGGATCGGGGAAAAGTACCTTTCTGCGCTGCATTAACTTCCTCGAAAAACCGAGTGAAGGGTCGATCGTGGTCAATGGCCAGACGATCAATCTGGTGCGCGACAAAGACGGTCAACTCAAAGTCGCCGATAAAAATCAACTGCGCTTACTGCGCACACGCCTGACGATGGTATTCCAGCACTTCAATCTCTGGAGCCATATGACGGTGCTGGAAAACGTCATGGAAGCGCCGATTCAGGTGTTGGGCCTGAGCAAGCAGGAAGCGCGCGAGCGGGCGGTGAAGTATCTGGCAAAAGTCGGGATAGACGAACGTGCGCAGGGGAAATATCCGGTGCATCTTTCCGGCGGTCAGCAACAGCGTGTTTCTATCGCGCGGGCGCTGGCGATGGAACCGGAAGTTTTACTGTTTGATGAACCTACCTCGGCGCTCGATCCTGAACTGGTAGGCGAAGTGTTGCGTATTATGCAGCAACTGGCAGAAGAGGGGAAAACCATGGTGGTAGTGACTCACGAAATGGGCTTTGCTCGCCATGTTTCTACTCATGTCATTTTCCTCCATCAGGGGAAAATAGAAGAAGAGGGCGCGCCGGAGCAGTTATTTGGCAACCCGCAAAGCCCTCGTCTGCAACGGTTCCTTAAGGGATCGCTGAAATAA", - "dna_sequence_length": 774, - "functions": [ - "histidine ABC transporter ATPase" - ], - "id": "CDS_2291", - "location": [ - [ - "NC_000913", - 2424509, - "-", - 774 - ] - ], - "md5": "2b531a6feb7a30527427ddb5ecbecb33", - "parent_gene": "", - "protein_md5": "e17e32ecc758294b9a222b3b100f74de", - "protein_translation": "MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSTHVIFLHQGKIEEEGAPEQLFGNPQSPRLQRFLKGSLK", - "protein_translation_length": 257, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2307" - ], - [ - "gene_synonym", - "hisM" - ], - [ - "gene_synonym", - "JW2304" - ], - [ - "gene_synonym", - "ASAP:ABE-0007613" - ], - [ - "gene_synonym", - "GI:16130242" - ], - [ - "gene_synonym", - "GeneID:946790" - ], - [ - "gene_synonym", - "ECK2301" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEU3" - ], - [ - "gene_synonym", - "EcoGene:EG10007" - ], - [ - "gene_synonym", - "NP_416810.1" - ] - ], - "dna_sequence": "GTGATCGAAATCTTACATGAATACTGGAAACCGCTGCTGTGGACCGACGGTTATCGCTTTACTGGTGTGGCGATCACTCTGTGGCTGCTTATTTTGTCGGTAGTGATAGGCGGAGTCCTGGCGCTGTTTCTGGCGATTGGTCGTGTCTCCAGTAATAAATACATCCAGTTTCCAATCTGGTTATTTACCTATATTTTTCGCGGTACGCCGCTGTATGTTCAGTTGCTGGTGTTCTATTCCGGCATGTACACGCTTGAGATTGTTAAGGGAACCGAATTCCTTAACGCTTTCTTCCGCAGTGGCCTGAACTGTACCGTGCTGGCGCTGACGCTTAACACCTGCGCTTACACTACCGAGATTTTTGCTGGGGCAATCCGTTCGGTTCCGCATGGGGAAATTGAAGCCGCCAGAGCCTATGGCTTCTCGACTTTTAAAATGTATCGCTGCATTATTTTGCCTTCTGCGCTGCGTATTGCGTTACCGGCATACAGCAACGAAGTGATCCTGATGCTGCACTCTACTGCGTTGGCATTTACTGCCACGGTGCCGGATCTGCTGAAAATAGCCCGCGATATTAACGCCGCCACGTATCAACCTTTTACCGCCTTCGGCATTGCCGCGGTGCTCTATTTAATCATCTCTTATGTCCTGATCAGCCTCTTTCGCAGAGCGGAAAAACGCTGGTTGCAGCATGTGAAACCTTCTTCAACGCACTGA", - "dna_sequence_length": 717, - "functions": [ - "histidine ABC transporter permease" - ], - "id": "CDS_2292", - "location": [ - [ - "NC_000913", - 2425233, - "-", - 717 - ] - ], - "md5": "2bfe76f981d9c23d4b8d316a37e339a7", - "parent_gene": "", - "protein_md5": "d6a63d3a51f4377c99c34a7d583926e5", - "protein_translation": "MIEILHEYWKPLLWTDGYRFTGVAITLWLLILSVVIGGVLALFLAIGRVSSNKYIQFPIWLFTYIFRGTPLYVQLLVFYSGMYTLEIVKGTEFLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKRWLQHVKPSSTH", - "protein_translation_length": 238, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12125" - ], - [ - "gene_synonym", - "GeneID:947235" - ], - [ - "gene_synonym", - "ASAP:ABE-0007615" - ], - [ - "gene_synonym", - "b2308" - ], - [ - "gene_synonym", - "JW2305" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52094" - ], - [ - "gene_synonym", - "hisQ" - ], - [ - "gene_synonym", - "NP_416811.1" - ], - [ - "gene_synonym", - "GI:16130243" - ], - [ - "gene_synonym", - "ECK2302" - ] - ], - "dna_sequence": "ATGTTGTATGGGTTTTCAGGTGTTATTTTACAGGGTGCGCTCGTCACGCTGGAGCTGGCTATCAGCTCTGTAGTGCTCGCTGTAATCATCGGTTTAATTGGCGCTGGCGGTAAGCTCTCGCAAAATCGGCTTTCGGGGCTGATTTTCGAAGGGTACACCACGCTGATTCGTGGCGTGCCGGACTTAGTGTTGATGCTGCTGATTTTCTACGGTTTGCAGATTGCGCTAAACACGGTGACGGAGGCGATGGGCGTCGGGCAGATTGATATCGATCCGATGGTCGCTGGTATTATCACTCTCGGTTTTATCTACGGTGCTTATTTTACCGAAACGTTCCGTGGTGCTTTTATGGCAGTGCCGAAAGGACATATAGAGGCGGCGACGGCGTTCGGTTTTACTCGTGGGCAAGTGTTTCGGCGGATCATGTTTCCGTCGATGATGCGTTACGCCCTGCCAGGCATTGGCAACAACTGGCAGGTGATCCTCAAATCTACCGCACTGGTTTCGTTACTCGGCCTGGAAGATGTGGTCAAAGCCACCCAACTGGCAGGCAAAAGTACCTGGGAACCGTTCTATTTCGCCATCGTCTGTGGCGTGATTTACCTGGTTTTCACCACTGTTTCCAATGGTGTGCTGCTGTTCCTTGAGCGCCGCTACTCCGTGGGTGTGAAGAGGGCTGACCTGTGA", - "dna_sequence_length": 687, - "functions": [ - "histidine ABC transporter permease" - ], - "id": "CDS_2293", - "location": [ - [ - "NC_000913", - 2425916, - "-", - 687 - ] - ], - "md5": "5b30c1e6d2ffffef8d9159b0b575368a", - "parent_gene": "", - "protein_md5": "8e2f00c641ea643bdbd969a367b8215b", - "protein_translation": "MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPSMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKRADL", - "protein_translation_length": 228, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12124" - ], - [ - "gene_synonym", - "ASAP:ABE-0007617" - ], - [ - "gene_synonym", - "JW2306" - ], - [ - "gene_synonym", - "b2309" - ], - [ - "gene_synonym", - "hisJ" - ], - [ - "gene_synonym", - "GeneID:945309" - ], - [ - "gene_synonym", - "NP_416812.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEU0" - ], - [ - "gene_synonym", - "ECK2303" - ], - [ - "gene_synonym", - "GI:16130244" - ] - ], - "dna_sequence": "ATGAAAAAACTGGTGCTATCGCTCTCTCTGGTTCTGGCCTTCTCCAGCGCAACTGCGGCGTTTGCTGCGATTCCGCAAAACATCCGCATCGGTACCGACCCGACCTATGCGCCATTTGAATCAAAAAATTCACAAGGCGAACTGGTTGGCTTCGATATCGATCTGGCAAAGGAATTATGCAAACGCATCAATACGCAATGTACGTTTGTCGAAAATCCGCTGGATGCGTTAATCCCGTCCTTAAAAGCGAAGAAGATTGACGCCATCATGTCATCGCTTTCCATTACGGAAAAACGTCAGCAAGAAATAGCCTTCACCGACAAACTGTACGCTGCCGATTCTCGTTTGGTGGTGGCGAAAAATTCTGACATTCAGCCGACAGTCGAGTCGCTGAAAGGCAAACGGGTAGGCGTATTGCAGGGCACCACCCAGGAGACGTTCGGTAATGAACATTGGGCACCAAAAGGCATTGAAATCGTCTCGTATCAGGGGCAGGACAACATTTATTCTGACCTGACTGCCGGACGTATTGATGCCGCGTTCCAGGATGAGGTCGCTGCCAGCGAAGGTTTCCTCAAACAACCTGTCGGTAAAGATTACAAATTCGGTGGCCCGTCTGTTAAAGATGAAAAACTGTTTGGCGTAGGGACCGGCATGGGCCTGCGTAAAGAAGATAACGAACTGCGCGAAGCACTGAACAAAGCCTTTGCCGAAATGCGCGCTGACGGTACTTACGAGAAATTAGCGAAAAAGTACTTCGATTTTGATGTTTATGGTGGCTAA", - "dna_sequence_length": 783, - "functions": [ - "histidine ABC transporter periplasmic binding protein" - ], - "id": "CDS_2294", - "location": [ - [ - "NC_000913", - 2426788, - "-", - 783 - ] - ], - "md5": "32ffb2402b5d3a8831ef44c0dffe3514", - "parent_gene": "", - "protein_md5": "c4cdd1b70c465cb610c9f2b2a1983a58", - "protein_translation": "MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNSQGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQEIAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG", - "protein_translation_length": 260, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2310" - ], - [ - "gene_synonym", - "EcoGene:EG10072" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09551" - ], - [ - "gene_synonym", - "JW2307" - ], - [ - "gene_synonym", - "NP_416813.1" - ], - [ - "gene_synonym", - "argT" - ], - [ - "gene_synonym", - "ASAP:ABE-0007621" - ], - [ - "gene_synonym", - "ECK2304" - ], - [ - "gene_synonym", - "GeneID:949030" - ], - [ - "gene_synonym", - "GI:16130245" - ] - ], - "dna_sequence": "ATGAAGAAGTCGATTCTCGCTCTGTCTTTGTTAGTCGGTCTCTCCACAGCGGCTTCCAGCTATGCGGCGCTACCGGAGACGGTACGTATCGGAACCGATACCACCTACGCACCGTTCTCATCGAAAGATGCTAAAGGTGATTTTGTTGGCTTTGATATCGATCTCGGTAACGAGATGTGCAAACGGATGCAGGTGAAATGTACCTGGGTTGCCAGTGACTTTGACGCGCTGATCCCCTCACTGAAAGCGAAAAAAATCGACGCTATTATTTCGTCGCTTTCCATTACCGATAAACGTCAGCAGGAGATTGCCTTCTCCGACAAGCTGTACGCCGCAGATTCTCGTTTGATTGCGGCCAAAGGTTCACCGATTCAGCCAACGCTGGATTCACTGAAAGGTAAACATGTTGGTGTGCTGCAGGGATCAACCCAGGAAGCTTACGCTAACGAGACCTGGCGTAGTAAAGGCGTGGATGTGGTGGCCTATGCCAACCAGGATTTGGTCTATTCCGATCTGGCTGCAGGACGTCTGGATGCTGCGTTACAAGATGAAGTTGCTGCCAGCGAAGGATTCCTCAAGCAACCTGCTGGTAAAGATTTCGCCTTTGCTGGCTCATCAGTAAAAGACAAAAAATACTTCGGTGATGGCACCGGTGTAGGGCTACGTAAAGATGATGCTGAACTGACGGCTGCCTTCAATAAGGCGCTTGGCGAGCTGCGTCAGGACGGCACCTACGACAAGATGGCGAAAAAGTATTTCGACTTTAATGTCTACGGTGACTGA", - "dna_sequence_length": 783, - "functions": [ - "lysine/arginine/ornithine transporter subunit" - ], - "id": "CDS_2295", - "location": [ - [ - "NC_000913", - 2427791, - "-", - 783 - ] - ], - "md5": "6d7e8ad69100c0e2b581dd836c10100c", - "parent_gene": "", - "protein_md5": "65a926bfd2167943d8099013a707a4ac", - "protein_translation": "MKKSILALSLLVGLSTAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELRQDGTYDKMAKKYFDFNVYGD", - "protein_translation_length": 260, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2311" - ], - [ - "gene_synonym", - "NP_416814.1" - ], - [ - "gene_synonym", - "ubiX" - ], - [ - "gene_synonym", - "JW2308" - ], - [ - "gene_synonym", - "GI:16130246" - ], - [ - "gene_synonym", - "GeneID:949033" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG03" - ], - [ - "gene_synonym", - "EcoGene:EG11044" - ], - [ - "gene_synonym", - "ECK2305" - ], - [ - "gene_synonym", - "ASAP:ABE-0007628" - ], - [ - "gene_synonym", - "dedF" - ] - ], - "dna_sequence": "ATGAAACGACTCATTGTAGGCATCAGCGGTGCCAGCGGCGCGATTTATGGCGTGCGCTTATTACAGGTTCTGCGCGATGTCACAGATATCGAAACGCATCTGGTGATGAGCCAGGCAGCGCGCCAGACCTTATCCCTCGAAACGGATTTTTCTCTGCGCGAAGTGCAGGCATTAGCCGATGTCACGCACGATGCGCGCGATATTGCCGCCAGCATCTCTTCCGGTTCTTTCCAGACGCTGGGGATGGTGATTTTACCCTGTTCAATCAAAACCCTTTCCGGCATTGTCCATAGCTATACTGATGGCTTACTGACCCGTGCGGCAGATGTGGTGCTGAAAGAGCGTCGCCCGTTGGTGCTCTGCGTGCGTGAAACACCATTGCACTTAGGCCATCTGCGTTTAATGACTCAGGCGGCAGAAATCGGTGCGGTGATTATGCCTCCCGTTCCGGCGTTTTATCATCGCCCGCAATCCCTTGATGATGTGATAAATCAGACGGTTAATCGTGTTCTTGACCAGTTTGCGATAACCCTTCCTGAAGATCTCTTTGCCCGCTGGCAGGGCGCATAA", - "dna_sequence_length": 570, - "functions": [ - "3-octaprenyl-4-hydroxybenzoate carboxy-lyase" - ], - "id": "CDS_2296", - "location": [ - [ - "NC_000913", - 2428626, - "-", - 570 - ] - ], - "md5": "6342444c70c4c33f631a4558d99e500a", - "parent_gene": "", - "protein_md5": "ff72e6c4d0b3faf9e08816a9063573e7", - "protein_translation": "MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTLSLETDFSLREVQALADVTHDARDIAASISSGSFQTLGMVILPCSIKTLSGIVHSYTDGLLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLDDVINQTVNRVLDQFAITLPEDLFARWQGA", - "protein_translation_length": 189, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2312" - ], - [ - "gene_synonym", - "NP_416815.1" - ], - [ - "gene_synonym", - "JW2309" - ], - [ - "gene_synonym", - "EcoGene:EG10794" - ], - [ - "gene_synonym", - "purC" - ], - [ - "gene_synonym", - "GeneID:946794" - ], - [ - "gene_synonym", - "ade" - ], - [ - "gene_synonym", - "purF" - ], - [ - "gene_synonym", - "ASAP:ABE-0007631" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG16" - ], - [ - "gene_synonym", - "GI:16130247" - ], - [ - "gene_synonym", - "ECK2306" - ] - ], - "dna_sequence": "ATGTGCGGTATTGTCGGTATCGCCGGTGTTATGCCGGTTAACCAGTCGATTTATGATGCCTTAACGGTGCTTCAGCATCGCGGTCAGGATGCCGCCGGCATCATCACCATAGATGCCAATAACTGCTTCCGTTTGCGTAAAGCGAACGGGCTGGTGAGCGATGTATTTGAAGCTCGCCATATGCAGCGTTTGCAGGGCAATATGGGCATTGGTCATGTGCGTTACCCCACGGCTGGCAGCTCCAGCGCCTCTGAAGCGCAGCCGTTTTACGTTAACTCCCCGTATGGCATTACGCTTGCCCACAACGGCAATCTGACCAACGCTCACGAGTTGCGTAAAAAACTGTTTGAAGAAAAACGCCGCCACATCAACACCACTTCCGACTCGGAAATTCTGCTTAATATCTTCGCCAGCGAGCTGGACAACTTCCGCCACTACCCGCTGGAAGCCGACAATATTTTCGCTGCCATTGCTGCCACAAACCGCTTAATCCGCGGCGCGTATGCCTGTGTGGCGATGATTATCGGCCACGGTATGGTTGCTTTCCGCGATCCAAACGGGATTCGTCCGCTGGTACTGGGAAAACGTGATATTGACGAGAACCGTACAGAATATATGGTCGCTTCCGAAAGCGTAGCGCTCGATACGCTGGGCTTTGATTTCCTGCGTGACGTCGCGCCGGGCGAAGCGATTTACATCACTGAAGAAGGGCAGTTGTTTACCCGTCAATGTGCTGACAATCCGGTCAGCAATCCGTGCCTGTTTGAGTATGTATACTTTGCCCGCCCGGACTCGTTTATCGACAAAATTTCCGTTTACAGCGCGCGTGTGAATATGGGCACGAAACTGGGCGAGAAAATTGCCCGCGAATGGGAAGATCTGGATATCGACGTGGTGATCCCGATCCCAGAAACCTCGTGTGATATCGCGCTGGAAATTGCTCGTATTCTGGGCAAACCGTACCGCCAGGGCTTCGTTAAAAACCGCTATGTTGGCCGCACCTTTATCATGCCGGGCCAGCAGCTGCGTCGTAAGTCCGTGCGCCGTAAACTGAATGCCAACCGCGCCGAGTTCCGCGATAAAAACGTCCTGCTGGTCGACGACTCCATCGTCCGTGGCACCACTTCTGAGCAGATTATCGAGATGGCACGCGAAGCCGGAGCGAAGAAAGTGTACCTCGCTTCTGCGGCACCGGAAATTCGCTTCCCGAACGTTTATGGTATTGATATGCCGAGCGCCACGGAACTGATCGCTCACGGTCGCGAAGTTGATGAAATTCGCCAGATCATCGGTGCTGACGGGTTGATTTTCCAGGATCTGAACGATCTGATCGACGCCGTTCGCGCTGAAAATCCGGATATCCAGCAGTTTGAATGCTCGGTGTTCAACGGCGTCTACGTCACCAAAGATGTTGATCAGGGCTACCTCGATTTCCTCGATACGTTACGTAATGATGACGCCAAAGCAGTGCAACGTCAGAACGAAGTGGAAAATCTCGAAATGCATAACGAAGGATGA", 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], - [ - "gene_synonym", - "b2313" - ], - [ - "gene_synonym", - "EcoGene:EG10169" - ], - [ - "gene_synonym", - "JW2310" - ], - [ - "gene_synonym", - "ASAP:ABE-0007633" - ], - [ - "gene_synonym", - "GI:16130248" - ], - [ - "gene_synonym", - "NP_416816.1" - ], - [ - "gene_synonym", - "GeneID:945055" - ], - [ - "gene_synonym", - "dedE" - ], - [ - "gene_synonym", - "ECK2307" - ] - ], - "dna_sequence": "ATGGTCTGGATTGATTACGCCATAATCGCGGTGATTGCTTTTTCCTCTCTGGTTAGCCTGATCCGCGGCTTTGTTCGTGAAGCGTTATCGCTGGTGACATGGGGTTGTGCTTTCTTTGTTGCCAGTCATTACTACACTTACCTGTCAGTCTGGTTTACGGGCTTTGAAGACGAACTGGTTCGAAATGGGATTGCCATCGCGGTACTGTTTATCGCTACCCTGATCGTTGGTGCTATCGTGAACTTCGTGATAGGCCAGTTGGTGGAGAAAACGGGGTTGTCAGGCACCGATCGGGTGCTGGGCGTCTGTTTCGGTGCGTTGCGCGGTGTGTTGATTGTTGCTGCCATTCTCTTCTTTCTCGACTCCTTTACCGGGGTGTCGAAAAGCGAAGACTGGAGCAAATCACAGCTGATCCCGCAATTCAGTTTTATCATCAGATGTTTTTTTGATTATCTGCAAAGCTCGTCAAGTTTCTTGCCCAGAGCGTAA", - "dna_sequence_length": 489, - "functions": [ - "colicin V production protein" - ], - "id": "CDS_2298", - "location": [ - [ - "NC_000913", - 2430763, - "-", - 489 - ] - ], - "md5": "eb9518b02a4cb644ef75531a495416a5", - "parent_gene": "", - "protein_md5": "c7dabbedbcc8b42cc9d24263ae5fa4b9", - "protein_translation": "MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHYYTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGVCFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRCFFDYLQSSSSFLPRA", - "protein_translation_length": 162, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007643" - ], - [ - "gene_synonym", - "b2314" - ], - [ - "gene_synonym", - "JW5378" - ], - [ - "gene_synonym", - "GeneID:944971" - ], - [ - "gene_synonym", - "GI:90111417" - ], - [ - "gene_synonym", - "ECK2308" - ], - [ - "gene_synonym", - "NP_416817.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09549" - ], - [ - "gene_synonym", - "dedD" - ], - [ - "gene_synonym", - "EcoGene:EG10218" - ] - ], - "dna_sequence": "GTGGCAAGTAAGTTTCAGAATCGGTTAGTGGGCACGATCGTGCTGGTGGCGCTGGGGGTGATTGTACTTCCAGGGCTGCTGGACGGGCAGAAAAAACATTATCAGGATGAGTTCGCGGCTATCCCGCTGGTGCCGAAAGCGGGCGATCGTGATGAGCCTGATATGATGCCAGCCGCCACCCAGGCGTTACCGACGCAGCCGCCGGAAGGCGCAGCGGAAGAGGTGCGGGCAGGTGATGCCGCAGCACCGTCGCTCGATCCGGCCACTATTGCAGCCAATAACACCGAGTTTGAACCGGAACCTGCACCGGTCGCCCCACCGAAGCCGAAACCGGTGGAGCCGCCTAAACCAAAGGTTGAAGCACCACCTGCGCCGAAGCCAGAACCGAAGCCGGTCGTGGAAGAAAAAGCTGCACCGACGGGTAAAGCCTATGTTGTGCAACTGGGTGCGCTGAAAAATGCCGATAAAGTGAATGAGATTGTCGGTAAGCTGCGCGGTGCCGGTTATCGGGTTTATACGTCGCCATCCACGCCAGTGCAGGGTAAAATTACCCGTATTCTGGTTGGGCCGGATGCCTCGAAAGATAAGCTGAAAGGTTCGCTGGGTGAGTTGAAGCAACTTTCTGGCTTAAGTGGCGTGGTAATGGGCTATACGCCGAATTAA", - "dna_sequence_length": 663, - "functions": [ - "membrane-anchored periplasmic protein involved in septation" - ], - "id": "CDS_2299", - "location": [ - [ - "NC_000913", - 2431684, - "-", - 663 - ] - ], - "md5": "43e500cb4a20fb5c9ce6bb3994b01bab", - "parent_gene": "", - "protein_md5": "c11d6e96323c300744d87e36cbb2e49c", - "protein_translation": "MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLVPKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPAPVAPPKPKPVEPPKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEIVGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYTPN", - "protein_translation_length": 220, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945451" - ], - [ - "gene_synonym", - "b2315" - ], - [ - "gene_synonym", - "GI:16130250" - ], - [ - "gene_synonym", - "ASAP:ABE-0007645" - ], - [ - "gene_synonym", - "EcoGene:EG10327" - ], - [ - "gene_synonym", - "JW2312" - ], - [ - "gene_synonym", - "ECK2309" - ], - [ - "gene_synonym", - "folC" - ], - [ - "gene_synonym", - "dedC" - ], - [ - "gene_synonym", - "NP_416818.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08192" - ] - ], - "dna_sequence": "ATGATTATCAAACGCACTCCTCAAGCCGCGTCGCCTCTGGCTTCGTGGCTTTCTTATCTGGAAAACCTGCACAGTAAAACTATCGATCTCGGCCTTGAGCGCGTGAGCCTGGTCGCGGCGCGTCTTGGCGTCCTGAAACCAGCGCCATTTGTGTTTACCGTTGCGGGTACGAATGGCAAAGGCACCACCTGCCGTACGCTGGAGTCGATTCTGATGGCGGCAGGGTACAAAGTGGGCGTCTACAGTTCGCCTCATCTGGTGCGTTATACCGAGCGCGTACGTGTGCAGGGCCAGGAATTGCCGGAATCGGCCCACACCGCCTCTTTTGCGGAGATTGAATCGGCACGCGGTGATATTTCCCTGACCTATTTCGAGTACGGTACGCTGTCGGCGTTGTGGCTGTTCAAGCAGGCACAACTTGACGTGGTGATTCTGGAAGTAGGGCTGGGCGGTCGTCTGGACGCAACCAATATTGTCGACGCCGATGTCGCGGTAGTAACCAGTATTGCGCTGGATCATACCGACTGGCTGGGTCCAGATCGCGAAAGTATTGGTCGCGAGAAAGCAGGCATCTTCCGCAGCGAAAAACCGGCAATTGTCGGTGAGCCGGAAATGCCTTCTACCATTGCTGATGTGGCGCAGGAAAAAGGTGCACTGTTACAACGTCGGGGCGTTGAGTGGAACTATTCCGTCACCGATCATGACTGGGCGTTTAGCGATGCTCACGGCACGCTGGAAAATCTGCCGTTGCCGCTTGTCCCGCAACCGAATGCCGCAACAGCGCTGGCGGCACTGCGTGCCAGCGGGCTGGAAGTCAGTGAAAATGCCATTCGCGACGGGATTGCCAGCGCAATTTTGCCGGGACGTTTCCAGATTGTGAGCGAGTCGCCACGCGTTATTTTTGATGTCGCGCATAATCCACATGCGGCGGAATATCTCACCGGGCGTATGAAAGCGCTACCGAAAAACGGGCGCGTGCTGGCGGTTATCGGTATGCTACATGATAAAGATATTGCCGGAACTCTGGCCTGGTTGAAAAGCGTGGTTGATGACTGGTATTGTGCGCCACTGGAAGGGCCGCGCGGTGCCACGGCAGAACAACTGCTTGAGCATTTGGGTAACGGCAAATCATTTGATAGCGTTGCGCAGGCATGGGATGCCGCAATGGCGGACGCTAAAGCGGAAGACACCGTGCTGGTGTGTGGTTCTTTCCACACGGTCGCACATGTCATGGAAGTGATTGACGCGAGGAGAAGCGGTGGCAAGTAA", 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"gene_synonym", - "ECK2310" - ], - [ - "gene_synonym", - "b2316" - ], - [ - "gene_synonym", - "accD" - ], - [ - "gene_synonym", - "EcoGene:EG10217" - ], - [ - "gene_synonym", - "ASAP:ABE-0007648" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9Q5" - ], - [ - "gene_synonym", - "JW2313" - ], - [ - "gene_synonym", - "NP_416819.1" - ], - [ - "gene_synonym", - "dedB" - ] - ], - "dna_sequence": "ATGAGCTGGATTGAACGAATTAAAAGCAACATTACTCCCACCCGCAAGGCGAGCATTCCTGAAGGGGTGTGGACTAAGTGTGATAGCTGCGGTCAGGTTTTATACCGCGCTGAGCTGGAACGTAATCTTGAGGTCTGTCCGAAGTGTGACCATCACATGCGTATGACAGCGCGTAATCGCCTGCATAGCCTGTTAGATGAAGGAAGCCTTGTGGAGCTGGGTAGCGAGCTTGAGCCGAAAGATGTGCTGAAGTTTCGTGACTCCAAGAAGTATAAAGACCGTCTGGCATCTGCGCAGAAAGAAACCGGCGAAAAAGATGCGCTGGTGGTGATGAAAGGCACTCTGTATGGAATGCCGGTTGTCGCTGCGGCATTCGAGTTCGCCTTTATGGGCGGTTCAATGGGGTCTGTTGTGGGTGCACGTTTCGTGCGTGCCGTTGAGCAGGCGCTGGAAGATAACTGCCCGCTGATCTGCTTCTCCGCCTCTGGTGGCGCACGTATGCAGGAAGCACTGATGTCGCTGATGCAGATGGCGAAAACCTCTGCGGCACTGGCAAAAATGCAGGAGCGCGGCTTGCCGTACATCTCCGTGCTGACCGACCCGACGATGGGCGGTGTTTCTGCAAGTTTCGCCATGCTGGGCGATCTCAACATCGCTGAACCGAAAGCGTTAATCGGCTTTGCCGGTCCGCGTGTTATCGAACAGACCGTTCGCGAAAAACTGCCGCCTGGATTCCAGCGCAGTGAATTCCTGATCGAGAAAGGCGCGATCGACATGATCGTCCGTCGTCCGGAAATGCGCCTGAAACTGGCGAGCATTCTGGCGAAGTTGATGAATCTGCCAGCGCCGAATCCTGAAGCGCCGCGTGAAGGCGTAGTGGTACCCCCGGTACCGGATCAGGAACCTGAGGCCTGA", - "dna_sequence_length": 915, - "functions": [ - "acetyl-CoA carboxylase, beta (carboxyltransferase) subunit" - ], - "id": "CDS_2301", - "location": [ - [ - "NC_000913", - 2433926, - "-", - 915 - ] - ], - "md5": "d6e9d73b694d8724d9bf6d45168b49da", - "parent_gene": "", - "protein_md5": "00f16035247d9646639b739f14fd7dc5", - "protein_translation": "MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYKDRLASAQKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLPAPNPEAPREGVVVPPVPDQEPEA", - "protein_translation_length": 304, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007653" - ], - [ - "gene_synonym", - "b2317" - ], - [ - "gene_synonym", - "GI:16130252" - ], - [ - "gene_synonym", - "JW2314" - ], - [ - "gene_synonym", - "ECK2311" - ], - [ - "gene_synonym", - "NP_416820.1" - ], - [ - "gene_synonym", - "GeneID:946798" - ], - [ - "gene_synonym", - "dedA" - ], - [ - "gene_synonym", - "EcoGene:EG10216" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABP6" - ] - ], - "dna_sequence": "ATGGACCTGATTTATTTCCTCATCGATTTTATCCTGCACATTGACGTGCATCTGGCAGAGCTGGTCGCGGAGTACGGCGTCTGGGTTTATGCCATTTTGTTCTTAATTTTGTTCTGTGAAACCGGTCTGGTGGTAACGCCGTTTTTACCGGGTGATTCATTGCTGTTTGTTGCCGGAGCGTTGGCATCACTGGAAACCAACGATCTCAACGTCCATATGATGGTGGTGCTGATGCTGATCGCCGCGATTGTGGGTGACGCGGTCAATTACACTATCGGGCGGTTGTTCGGTGAAAAGTTGTTCAGTAATCCCAATTCGAAAATTTTCCGTCGCAGTTATCTCGACAAAACCCATCAGTTTTATGAGAAACATGGCGGCAAAACGATTATTCTCGCCCGTTTTGTGCCGATCGTCAGAACGTTCGCCCCGTTTGTTGCGGGAATGGGCCACATGTCGTACCGTCATTTCGCCGCTTATAACGTGATCGGCGCACTGTTGTGGGTACTGCTTTTTACCTACGCAGGCTATTTCTTCGGTACAATCCCGATGGTTCAGGATAACCTTAAGCTGCTGATCGTCGGGATTATTGTGGTTTCTATTTTGCCGGGCGTCATCGAAATAATCCGTCACAAACGCGCTGCGGCACGCGCCGCAAAATAA", - "dna_sequence_length": 660, - "functions": [ - "DedA family inner membrane protein" - ], - "id": "CDS_2302", - "location": [ - [ - "NC_000913", - 2434741, - "-", - 660 - ] - ], - "md5": "1e16950bca3325180efa2aa75f9fe091", - "parent_gene": "", - "protein_md5": "21b21923ff6f1fa0d08ee0d7d60d1f78", - "protein_translation": "MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALLWVLLFTYAGYFFGTIPMVQDNLKLLIVGIIVVSILPGVIEIIRHKRAAARAAK", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2312" - ], - [ - "gene_synonym", - "GI:16130253" - ], - [ - "gene_synonym", - "ASAP:ABE-0007657" - ], - [ - "gene_synonym", - "asuC" - ], - [ - "gene_synonym", - "b2318" - ], - [ - "gene_synonym", - "leuK" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07649" - ], - [ - "gene_synonym", - "hisT" - ], - [ - "gene_synonym", - "JW2315" - ], - [ - "gene_synonym", - "GeneID:946793" - ], - [ - "gene_synonym", - "EcoGene:EG10454" - ], - [ - "gene_synonym", - "truA" - ], - [ - "gene_synonym", - "NP_416821.1" - ] - ], - "dna_sequence": "ATGTCCGACCAGCAACAACCGCCAGTTTATAAAATTGCGCTGGGCATTGAGTACGACGGCAGTAAGTATTACGGCTGGCAACGGCAGAACGAAGTCCGCAGTGTGCAGGAGAAGCTGGAAAAGGCGCTCTCCCAGGTGGCGAACGAACCCATCACCGTCTTCTGCGCCGGGCGTACTGACGCAGGGGTACACGGTACCGGGCAGGTTGTGCATTTCGAAACAACCGCGCTGCGCAAAGACGCGGCGTGGACCTTGGGCGTAAATGCGAATTTACCTGGTGACATCGCTGTGCGTTGGGTTAAAACTGTACCTGATGATTTTCATGCCCGATTTAGCGCCACGGCTCGCCGTTATCGCTACATCATCTACAATCATCGGCTGCGCCCGGCGGTACTGAGTAAAGGGGTAACCCATTTTTACGAACCGCTGGACGCTGAACGGATGCATCGGGCTGCGCAATGCTTGCTGGGCGAGAATGATTTCACCTCGTTCCGTGCGGTGCAGTGCCAGTCCCGAACCCCGTGGCGCAACGTTATGCATATTAATGTCACGCGTCACGGTCCTTATGTGGTGGTAGATATTAAAGCGAATGCTTTTGTACATCATATGGTCAGGAATATTGTCGGCAGCCTGATGGAAGTCGGTGCCCACAACCAGCCGGAGAGCTGGATAGCAGAGTTGCTGGCGGCAAAGGACAGAACGCTGGCGGCAGCAACGGCAAAAGCGGAAGGGCTGTATCTGGTCGCGGTGGATTACCCTGACCGGTATGATCTTCCAAAACCGCCAATGGGCCCGCTATTTCTGGCGGACTAA", - "dna_sequence_length": 813, - "functions": [ - "tRNA pseudouridine(38-40) synthase" - ], - "id": "CDS_2303", - "location": [ - [ - "NC_000913", - 2435636, - "-", - 813 - ] - ], - "md5": "9f122ab3a55706fa69c8cf672ab062e1", - "parent_gene": "", - "protein_md5": "eff7bcacb9fe4119018b295d02e209c9", - "protein_translation": "MSDQQQPPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTDAGVHGTGQVVHFETTALRKDAAWTLGVNANLPGDIAVRWVKTVPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRYDLPKPPMGPLFLAD", - "protein_translation_length": 270, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "usg" - ], - [ - "gene_synonym", - "GI:16130254" - ], - [ - "gene_synonym", - "NP_416822.1" - ], - [ - "gene_synonym", - "ECK2313" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08390" - ], - [ - "gene_synonym", - "b2319" - ], - [ - "gene_synonym", - "ASAP:ABE-0007660" - ], - [ - "gene_synonym", - "JW2316" - ], - [ - "gene_synonym", - "GeneID:946797" - ], - [ - "gene_synonym", - "EcoGene:EG11059" - ] - ], - "dna_sequence": "ATGTCTGAAGGCTGGAACATTGCCGTCCTGGGCGCAACTGGCGCTGTGGGCGAAGCCCTGCTTGAAACGCTGGCTGAACGTCAGTTCCCGGTTGGGGAAATTTATGCACTGGCACGTAACGAAAGCGCAGGCGAACAACTGCGCTTTGGTGGTAAGACAATCACCGTGCAGGATGCCGCTGAATTCGACTGGACGCAGGCGCAGCTGGCATTTTTTGTCGCAGGCAAAGAAGCTACCGCTGCCTGGGTTGAAGAAGCGACCAACTCAGGTTGCCTGGTGATCGACAGCAGTGGATTGTTTGCTCTCGAACCCGACGTACCGCTGGTGGTGCCGGAAGTAAACCCGTTTGTACTGACAGATTACCGGAACCGGAATGTCATCGCCGTACCAGACAGTCTGACCAGCCAGCTGCTGGCGGCACTGAAACCGTTAATCGATCAGGGCGGTTTATCACGTATCAGCGTTACCAGCCTGATTTCAGCCTCCGCCCAGGGCAAAAAAGCGGTCGATGCGTTAGCGGGGCAGAGTGCGAAATTGCTCAACGGCATTCCGATTGACGAAGAAGATTTCTTCGGGCGTCAGCTGGCGTTCAACATGCTGCCGTTACTGCCGGATAGCGAAGGTAGCGTGCGTGAAGAACGTCGTATCGTTGACGAAGTACGCAAAATCCTGCAGGACGAAGGGCTGATGATTTCGGCTAGCGTCGTCCAGGCACCGGTATTCTACGGTCATGCCCAGATGGTCAACTTTGAAGCTCTGCGTCCACTGGCAGCAGAAGAAGCGCGTGATGCGTTTGTTCAAGGCGAAGATATTGTGCTCTCTGAAGAGAACGAATTCCCAACTCAGGTAGGTGATGCTTCGGGTACGCCGCATCTTTCTGTTGGCTGCGTGCGTAATGACTACGGTATGCCGGAGCAAGTCCAGTTCTGGTCGGTGGCCGATAACGTTCGCTTTGGCGGCGCGCTGATGGCAGTAAAAATCGCCGAGAAACTGGTGCAGGAGTATCTGTACTAA", 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"gene_synonym", - "NP_416823.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05459" - ], - [ - "gene_synonym", - "ASAP:ABE-0007663" - ], - [ - "gene_synonym", - "JW2317" - ] - ], - "dna_sequence": "GTGAAAATCCTTGTTGATGAAAATATGCCTTATGCCCGCGACTTATTTAGCCGTTTGGGTGAGGTGACCGCGGTTCCCGGGCGTCCAATCCCCGTCGCTCAACTGGCAGACGCGGATGCGCTGATGGTGCGTTCGGTCACGAAAGTGAATGAATCTTTGCTGGCAGGAAAACCCATTAAATTTGTTGGCACTGCCACTGCGGGGACCGACCATGTCGATGAAGCATGGTTGAAGCAGGCGGGAATTGGTTTTTCCGCTGCACCTGGCTGTAATGCGATTGCGGTGGTGGAATATGTTTTCTCCTCCCTGCTGATGCTTGCCGAACGCGATGGATTTTCACTGTACGACCGTACGGTGGGGATCGTGGGCGTTGGTAACGTTGGACGTCGATTGCAGGCGCGACTGGAAGCGTTAGGGATTAAAACCTTACTTTGCGATCCGCCTCGCGCCGACCGTGGGGATGAGGGTGATTTCCGCTCGCTGGATGAGTTAGTCCAGCGCGCGGATATTCTGACTTTCCATACGCCACTCTTTAAAGATGGTCCGTACAAAACGCTACATCTGGCGGATGAAAAACTGATCCGTAGCCTGAAGCCCGGAGCGATTCTGATTAACGCCTGCCGTGGCGCAGTCGTCGATAATACTGCGTTGCTGACCTGCCTGAATGAAGGCCAGAAGTTAAGCGTAGTGCTGGATGTCTGGGAAGGCGAACCGGAACTCAACGTCGAGCTGCTGAAAAAAGTGGATATCGGCACGTCGCATATCGCAGGCTATACCCTGGAAGGTAAAGCACGCGGTACTACGCAAGTGTTTGAAGCTTATAGCAAGTTTATTGGGCATGAACAGCACGTTGCGCTGGATACATTACTGCCTGCGCCAGAGTTTGGTCGCATTACGCTGCATGGCCCGCTCGATCAACCGACGCTGAAAAGGCTGGTGCATTTGGTGTATGATGTGCGCCGCGATGACGCACCGCTGCGTAAAGTCGCCGGGATACCGGGTGAGTTCGATAAACTGCGCAAAAACTATCTTGAGCGCCGTGAATGGTCATCTCTGTATGTAATTTGTGATGACGCCAGTGCGGCATCATTGCTGTGTAAACTGGGTTTTAACGCCGTTCATCATCCGGCACGTTAA", 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"gene_synonym", - "GI:16130256" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15286" - ], - [ - "gene_synonym", - "rflH" - ], - [ - "gene_synonym", - "EcoGene:EG10229" - ], - [ - "gene_synonym", - "div" - ], - [ - "gene_synonym", - "NP_416824.1" - ], - [ - "gene_synonym", - "GeneID:946776" - ] - ], - "dna_sequence": "ATGATACAACCTATTTCCGGCCCTCCTCCTGGGCAACCACCAGGTCAGGGAGATAATCTGCCGTCTGGCACGGGCAATCAGCCTTTATCCAGTCAGCAACGTACTTCGCTGGAAAGCTTAATGACGAAAGTGACCTCACTGACGCAACAGCAAAGAGCAGAACTGTGGGCGGGTATCAGGCACGATATTGGTCTGTCGGGAGATTCACCGCTGCTTTCGCGTCACTTCCCTGCCGCTGAGCATAATCTGGCGCAACGTCTGCTGGCCGCGCAAAAAAGCCATTCTGCCCGCCAGCTTTTAGCGCAATTAGGGGAGTATTTACGTCTGGGGAATAATCGTCAGGCGGTCACGGATTATATCCGTCATAACTTTGGTCAGACGCCGCTGAATCAGCTCTCACCGGAGCAATTAAAAACCATTCTCACCCTGTTGCAGGAAGGGAAGATGGTTATTCCGCAACCACAGCAGCGCGAGGCGACCGACCGTCCTTTATTACCGGCGGAGCACAATGCGCTAAAACAGCTGGTGACCAAACTTGCGGCGGCAACGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATGGCGAGTTAATTCCAGCGAAACTGTTTAACCATCTGGTGACCTGGCTACAGGCGCGTCAGACGCTAAGCCAGCAAAATACGCCGACGCTGGAATCACTACAGATGACGCTAAAACAACCTTTAGATGCCAGTGAACTGGCGGCGTTATCGGCATATATCCAGCAAAAATATGGTCTTTCTGCGCAATCATCGCTTTCTTCTGCCCAGGCCGAGGATATTCTTAATCAGCTTTATCAACGGCGGGTTAAAGGGATTGATCCGCGTGTTATGCAACCGCTGCTTAATCCTTTTCCACCGATGATGGACACGTTGCAAAATATGGCAACGCGTCCCGCGCTGTGGATACTGTTAGTCGCGATTATCCTGATGCTGGTCTGGCTGGTTCGTTAA", - "dna_sequence_length": 996, - "functions": [ - "putative flagella assembly protein" - ], - "id": "CDS_2306", - "location": [ - [ - "NC_000913", - 2437950, - "+", - 996 - ] - ], - "md5": "1bd4a7472c430d44590932ea6e47e009", - "parent_gene": "", - "protein_md5": "8c427423cdce9398529d1ea8d7c2f4d3", - "protein_translation": "MIQPISGPPPGQPPGQGDNLPSGTGNQPLSSQQRTSLESLMTKVTSLTQQQRAELWAGIRHDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQLGEYLRLGNNRQAVTDYIRHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREATDRPLLPAEHNALKQLVTKLAAATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWLQARQTLSQQNTPTLESLQMTLKQPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDILNQLYQRRVKGIDPRVMQPLLNPFPPMMDTLQNMATRPALWILLVAIILMLVWLVR", - "protein_translation_length": 331, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2316" - ], - [ - "gene_synonym", - "ASAP:ABE-0007669" - ], - [ - "gene_synonym", - "yfcJ" - ], - [ - "gene_synonym", - "JW2319" - ], - [ - "gene_synonym", - "EcoGene:EG14113" - ], - [ - "gene_synonym", - "b2322" - ], - [ - "gene_synonym", - "GI:16130257" - ], - [ - "gene_synonym", - "GeneID:946791" - ], - [ - "gene_synonym", - "NP_416825.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77549" - ] - ], - "dna_sequence": "ATGACTGCTGTAAGCCAAACCGAAACACGATCTTCTGCCAATTTTTCGCTCTTCCGCATCGCTTTTGCGGTTTTTCTCACCTACATGACCGTAGGGTTGCCGTTGCCGGTTATCCCGCTGTTTGTTCATCATGAACTGGGCTATGGCAATACCATGGTCGGCATTGCCGTCGGGATTCAGTTTCTGGCTACGGTGCTGACGCGTGGTTACGCCGGGCGACTGGCCGATCAATATGGTGCAAAACGTTCGGCGCTTCAGGGAATGTTAGCTTGTGGTCTGGCTGGCGGCGCGTTGCTGCTGGCGGCGATTTTGCCTGTCTCCGCACCGTTCAAATTTGCTCTGTTGGTCGTCGGGCGTTTGATTCTTGGCTTTGGTGAAAGCCAGTTACTGACAGGCGCTCTGACCTGGGGACTAGGCATCGTAGGGCCAAAACACTCTGGCAAAGTGATGTCATGGAACGGAATGGCGATTTACGGTGCCCTCGCTGTTGGTGCTCCGCTTGGCCTGTTGATTCATAGCCATTACGGTTTTGCCGCACTGGCGATCACCACAATGGTATTACCCGTACTGGCGTGGGCCTGTAACGGCACAGTGCGCAAAGTACCGGCCCTGGCGGGAGAACGTCCATCGCTGTGGAGCGTTGTCGGGCTTATCTGGAAACCAGGGTTAGGTCTGGCACTACAAGGCGTTGGTTTTGCTGTTATCGGGACTTTCGTTTCGCTCTACTTTGCCAGCAAAGGATGGGCGATGGCGGGCTTTACTCTTACCGCGTTTGGCGGCGCATTTGTCGTGATGCGCGTCATGTTTGGCTGGATGCCGGACCGTTTTGGCGGCGTGAAAGTGGCGATTGTCTCTCTGCTTGTAGAAACGGTGGGCTTGTTGCTGCTCTGGCAAGCCCCAGGTGCATGGGTCGCATTAGCGGGCGCGGCGTTAACCGGAGCCGGATGTTCGCTTATCTTTCCTGCGCTGGGCGTGGAGGTGGTTAAACGCGTCCCCTCACAAGTTCGCGGCACCGCACTGGGCGGTTACGCCGCGTTTCAGGATATCGCCCTCGGCGTCTCCGGGCCGCTGGCGGGAATGCTGGCGACCACGTTTGGTTACTCTTCGGTATTTCTTGCCGGGGCGATCTCTGCGGTGCTGGGTATTATTGTCACGATACTGTCATTTCGTCGGGGTTAA", 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"gene_synonym", - "b2323" - ], - [ - "gene_synonym", - "GI:16130258" - ], - [ - "gene_synonym", - "NP_416826.1" - ], - [ - "gene_synonym", - "fabC" - ], - [ - "gene_synonym", - "fabB" - ], - [ - "gene_synonym", - "EcoGene:EG10274" - ], - [ - "gene_synonym", - "GeneID:946799" - ] - ], - "dna_sequence": "ATGAAACGTGCAGTGATTACTGGCCTGGGCATTGTTTCCAGCATCGGTAATAACCAGCAGGAAGTCCTGGCATCTCTGCGTGAAGGACGTTCAGGGATCACTTTCTCTCAGGAGCTGAAGGATTCCGGCATGCGTAGCCACGTCTGGGGCAACGTAAAACTGGATACCACTGGCCTCATTGACCGCAAAGTTGTGCGCTTTATGAGCGACGCATCCATTTATGCATTCCTTTCTATGGAGCAGGCAATCGCTGATGCGGGCCTCTCTCCGGAAGCTTACCAGAATAACCCGCGCGTTGGCCTGATTGCAGGTTCCGGCGGCGGCTCCCCGCGTTTCCAGGTGTTCGGCGCTGACGCAATGCGCGGCCCGCGCGGCCTGAAAGCGGTTGGCCCGTATGTGGTCACCAAAGCGATGGCATCCGGCGTTTCTGCCTGCCTCGCCACCCCGTTTAAAATTCATGGCGTTAACTACTCCATCAGCTCCGCGTGTGCGACTTCCGCACACTGTATCGGTAACGCAGTAGAGCAGATCCAACTGGGCAAACAGGACATCGTGTTTGCTGGCGGCGGCGAAGAGCTGTGCTGGGAAATGGCTTGCGAATTCGACGCAATGGGTGCGCTGTCTACTAAATACAACGACACCCCGGAAAAAGCCTCCCGTACTTACGACGCTCACCGTGACGGTTTCGTTATCGCTGGCGGCGGCGGTATGGTAGTGGTTGAAGAGCTGGAACACGCGCTGGCGCGTGGTGCTCACATCTATGCTGAAATCGTTGGCTACGGCGCAACCTCTGATGGTGCAGACATGGTTGCTCCGTCTGGCGAAGGCGCAGTACGCTGCATGAAGATGGCGATGCATGGCGTTGATACCCCAATCGATTACCTGAACTCCCACGGTACTTCGACTCCGGTTGGCGACGTGAAAGAGCTGGCAGCTATCCGTGAAGTGTTCGGCGATAAGAGCCCGGCGATTTCTGCAACCAAAGCCATGACCGGTCACTCTCTGGGCGCTGCTGGCGTACAGGAAGCTATCTACTCTCTGCTGATGCTGGAACACGGCTTTATCGCCCCGAGCATCAACATTGAAGAGCTGGACGAGCAGGCTGCGGGTCTGAACATCGTGACCGAAACGACCGATCGCGAACTGACCACCGTTATGTCTAACAGCTTCGGCTTCGGCGGCACCAACGCCACGCTGGTAATGCGCAAGCTGAAAGATTAA", 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"gene_synonym", - "ASAP:ABE-0007681" - ], - [ - "gene_synonym", - "GeneID:946800" - ], - [ - "gene_synonym", - "b2324" - ], - [ - "gene_synonym", - "ECK2318" - ], - [ - "gene_synonym", - "JW5380" - ], - [ - "gene_synonym", - "trmC" - ], - [ - "gene_synonym", - "NP_416827.4" - ], - [ - "gene_synonym", - "EcoGene:EG14114" - ] - ], - "dna_sequence": "GTGAAACACTACTCCATACAACCTGCCAACCTCGAATTTAATGCTGAGGGTACACCTGTTTCCCGAGATTTTGACGATGTCTATTTTTCCAACGATAACGGGCTGGAAGAGACGCGTTATGTTTTTCTGGGAGGCAACCAATTAGAGGTACGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGATTAAACTTCCTGACGCTATGGCAGGCATTTGATCAGTTTCGCGAAGCGCATCCGCAAGCGCAATTACAACGCTTACATTTCATTAGTTTTGAGAAATTTCCCCTCACCCGTGCGGATTTAGCCTTAGCGCATCAACACTGGCCGGAACTGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACGCTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTGGACGGCTTTGCGCCAGCGAAAAACCCGGATATGTGGACGCAAAATCTGTTTAACGCCATGGCAAGGTTGGCGCGTCCGGGCGGCACGCTGGCGACATTTACGTCTGCCGGTTTTGTCCGCCGCGGTTTGCAGGACGCCGGATTCACGATGCAAAAACGTAAGGGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGGGGCGCTGTATCCGTTATTAAGCAAACACGATGAGGCGCTAAACCGCTTTTTCTCTAATGCGTTTACTTTTGCTCGTCGGTTTTACGACCAATTACCCGTTAAATTTGATCATGACTGGTGCGGCGTCACGCAGTTAGGCTGGGATGAGAAAAGCCAGCATAAAATCGCACAGATGTTGTCAATGGATTTACCCGCAGAACTGGCTGTAGCCGTTGAGGCAAATGCGGTTGAACAAATTACGGGCGTTGCGACAAATTGCAGCGGCATTACTTATCCGCAAGGTGGTTGGCTGTGCCCAGCAGAACTGACCCGTAATGTGCTGGAACTGGCGCAACAGCAGGGTTTGCAGATTTATTATCAATATCAGTTACAGAATTTATCCCGTAAGGATGACTGTTGGTTGTTGAATTTTGCAGGAGATCAGCAAGCAACACACAGCGTAGTGGTACTGGCGAACGGGCATCAAATCAGCCGATTCAGCCAAACGTCGACTCTCCCGGTGTATTCGGTTGCCGGGCAGGTCAGCCATATTCCGACAACGCCGGAATTGGCAGAGCTGAAGCAGGTGCTGTGCTATGACGGTTATCTCACGCCACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGATACGGCGTACAGTGAGGACGATCAGCAGCAGAATCGCCAGCGGTTGATTGATTGTTTCCCGCAGGCACAGTGGGCAAAAGAGGTTGATGTCAGTGATAAAGAGGCGCGCTGCGGTGTGCGTTGTGCCACCCGCGATCATCTGCCAATGGTAGGCAATGTTCCCGATTATGAGGCAACACTCGTGGAATATGCGTCGTTGGCGGAGCAGAAAGATGAGGCGGTAAGCGCGCCGGTTTTTGACGATCTCTTTATGTTTGCGGCTTTAGGTTCTCGCGGTTTGTGTTCTGCCCCGCTGTGTGCCGAGATTCTGGCGGCGCAGATGAGCGACGAACCGATTCCGATGGATGCCAGTACGCTGGCGGCGTTAAACCCGAATCGGTTATGGGTGCGGAAATTGTTGAAGGGTAAAGCGGTTAAGGCGGGGTAA", 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"MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLLKGKAVKAG", - "protein_translation_length": 668, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130260" - ], - [ - "gene_synonym", - "ASAP:ABE-0007684" - ], - [ - "gene_synonym", - "yfcL" - ], - [ - "gene_synonym", - "JW2322" - ], - [ - "gene_synonym", - "b2325" - ], - [ - "gene_synonym", - "GeneID:946804" - ], - [ - "gene_synonym", - "ECK2319" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64540" - ], - [ - "gene_synonym", - "NP_416828.1" - ], - [ - "gene_synonym", - "EcoGene:EG14115" - ] - ], - "dna_sequence": "ATGATCGCGGAGTTTGAATCACGCATTCTGGCATTAATCGACGGTATGGTTGACCATGCCAGTGATGATGAGTTGTTTGCCAGTGGGTATTTGCGTGGCCACCTGACATTAGCCATCGCAGAACTGGAAAGTGGTGATGACCACTCCGCTCAGGCGGTGCATACGACCGTTAGCCAGAGTCTGGAAAAAGCCATTGGTGCTGGTGAATTGTCGCCGCGTGACCAGGCGCTGGTGACCGATATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAA", - "dna_sequence_length": 279, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2310", - "location": [ - [ - "NC_000913", - 2444169, - "-", - 279 - ] - ], - "md5": "686cc9ec5fd6301ed2b3a5d3b5ef3baa", - "parent_gene": "", - "protein_md5": "5330ef2469142976e5ec195c1e8c17c5", - "protein_translation": "MIAEFESRILALIDGMVDHASDDELFASGYLRGHLTLAIAELESGDDHSAQAVHTTVSQSLEKAIGAGELSPRDQALVTDMWENLFQQASQQ", - "protein_translation_length": 92, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130261" - ], - [ - "gene_synonym", - "NP_416829.1" - ], - [ - "gene_synonym", - "yfcM" - ], - [ - "gene_synonym", - "ASAP:ABE-0007686" - ], - [ - "gene_synonym", - "EcoGene:EG14116" - ], - [ - "gene_synonym", - "GeneID:946807" - ], - [ - "gene_synonym", - "JW5381" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76938" - ], - [ - "gene_synonym", - "b2326" - ], - [ - "gene_synonym", - "epmC" - ], - [ - "gene_synonym", - "ECK2320" - ] - ], - "dna_sequence": "ATGAACAGTACACACCACTACGAGCAGTTGATTGAAATTTTTAATAGCTGCTTTGCCGATGATTTTAATACCCGTCTGATTAAAGGCGACGACGAACCGATCTATCTTCCTGCTGATGCGGAAGTACCGTATAACCGAATCGTCTTTGCTCATGGCTTTTATGCCAGCGCAATTCATGAGATTTCGCACTGGTGTATTGCCGGGAAAGCGCGCCGTGAGCTGGTTGATTTCGGCTACTGGTATTGCCCGGACGGACGCGATGCCCAAACGCAAAGCCAGTTTGAAGATGTTGAAGTGAAGCCGCAGGCGCTCGACTGGTTGTTCTGTGTGGCGGCGGGATATCCGTTTAACGTCAGTTGCGACAATCTGGAAGGGGATTTCGAACCGGATCGTGTGGTGTTTCAACGGCGAGTACATGCGCAGGTGATGGATTATCTGACAAATGGCATTCCGGAACGTCCGGCACGCTTCATTAAAGCACTACAAAATTATTATCACACGCCGGAACTTACGGCGGAACAGTTCCCGTGGCCGGAAGCGCTCAACTGA", - "dna_sequence_length": 549, - "functions": [ - "Elongation Factor P Lys34 hydroxylase" - ], - "id": "CDS_2311", - "location": [ - [ - "NC_000913", - 2444751, - "-", - 549 - ] - ], - "md5": "da7335818b520c49afd729cac1a95924", - "parent_gene": "", - "protein_md5": "bc76af2c847ecf8f8e2068c3c0635024", - "protein_translation": "MNSTHHYEQLIEIFNSCFADDFNTRLIKGDDEPIYLPADAEVPYNRIVFAHGFYASAIHEISHWCIAGKARRELVDFGYWYCPDGRDAQTQSQFEDVEVKPQALDWLFCVAAGYPFNVSCDNLEGDFEPDRVVFQRRVHAQVMDYLTNGIPERPARFIKALQNYYHTPELTAEQFPWPEALN", - "protein_translation_length": 182, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130262" - ], - [ - "gene_synonym", - "yfcA" - ], - [ - "gene_synonym", - "JW2324" - ], - [ - "gene_synonym", - "GeneID:946808" - ], - [ - "gene_synonym", - "ASAP:ABE-0007689" - ], - [ - "gene_synonym", - "NP_416830.1" - ], - [ - "gene_synonym", - "EcoGene:EG11144" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD30" - ], - [ - "gene_synonym", - "b2327" - ], - [ - "gene_synonym", - "ECK2321" - ] - ], - "dna_sequence": "ATGGAAACGTTTAATAGCCTGTTTATGGTTTCCCCGCTGTTGCTGGGAGTTCTCTTTTTTGTCGCCATGCTGGCGGGATTTATCGACTCGATTGCCGGTGGCGGTGGGTTACTCACCATTCCGGCATTGATGGCAGCGGGGATGTCTCCCGCTAATGCGCTGGCAACCAATAAACTGCAAGCCTGCGGCGGCTCTATTTCCGCTACTATCTACTTTATTCGCCGCAAAGTGGTTAGTTTAAGCGATCAGAAACTCAATATCGCCATGACCTTTGTCGGCTCAATGAGCGGCGCACTGCTGGTGCAATACGTTCAGGCTGATGTCTTACGGCAGATTTTGCCCATTCTGGTAATTTGTATCGGCCTCTATTTCTTGCTGATGCCAAAGCTAGGTGAAGAAGACCGCCAGCGCCGGATGTACGGTTTACCCTTCGCGTTAATAGCCGGTGGCTGCGTCGGTTTTTATGATGGATTCTTTGGCCCGGCTGCCGGGTCGTTTTACGCGCTGGCCTTCGTTACGCTGTGCGGATTTAACCTCGCCAAAGCCACGGCTCACGCCAAATTACTCAACGCAACGTCAAACATCGGCGGTTTACTGCTGTTTATTCTCGGCGGCAAAGTGATTTGGGCGACGGGCTTTGTCATGCTGGTGGGGCAGTTCCTCGGCGCGCGCATGGGTTCACGACTGGTGTTGAGCAAAGGACAAAAGCTGATCCGCCCGATGATTGTTATCGTCTCGGCGGTGATGAGTGCCAAATTACTTTACGACAGCCACGGACAGGAGATCCTCCACTGGTTGGGGATGAACTAA", - "dna_sequence_length": 810, - "functions": [ - "TauE/TSUP family inner membrane protein" - ], - "id": "CDS_2312", - "location": [ - [ - "NC_000913", - 2445560, - "-", - 810 - ] - ], - "md5": "f3ffc7cf8ca6429d92af20909444d5a8", - "parent_gene": "", - "protein_md5": "2115501e2a116e8ff68efd8802eec3f9", - "protein_translation": "METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN", - "protein_translation_length": 269, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2328" - ], - [ - "gene_synonym", - "NP_416831.1" - ], - [ - "gene_synonym", - "GI:16130263" - ], - [ - "gene_synonym", - "ASAP:ABE-0007691" - ], - [ - "gene_synonym", - "mepA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C0T5" - ], - [ - "gene_synonym", - "GeneID:946812" - ], - [ - "gene_synonym", - "JW2325" - ], - [ - "gene_synonym", - "EcoGene:EG10580" - ], - [ - "gene_synonym", - "ECK2322" - ] - ], - "dna_sequence": "ATGAATAAAACCGCGATTGCGCTGCTGGCTCTGCTTGCCAGTAGCGCCAGCCTGGCAGCGACGCCGTGGCAAAAAATAACCCAACCTGTGCCGGGTAGCGCACAATCGATAGGCAGTTTTTCTAATGGCTGTATTGTCGGCGCTGACACGCTGCCGATACAGTCCGAACATTATCAGGTCATGCGTACCGATCAGCGTCGCTATTTCGGTCACCCGGATCTGGTGATGTTTATCCAGCGTCTGAGTAGCCAGGTGAGCAATCTGGGCATGGGTACGGTGCTGATTGGCGATATGGGGATGCCCGCTGGTGGGCGTTTCAACGGCGGTCATGCCAGCCACCAGACCGGACTGGATGTCGATATCTTTCTGCAACTGCCGAAAACTCGCTGGACCTCCGCGCAGCTCTTGCGCCCGCAAGCACTGGACTTAGTTTCCCGCGACGGTAAACACGTTGTCTCCACGCTGTGGAAGCCAGAAATTTTCAGCTTGATCAAACTCGCCGCCCAGGACAAAGACGTCACGCGCATTTTTGTTAATCCGGCGATTAAACAACAACTTTGCCTTGATGCGGGCACCGATCGCGACTGGTTGCGCAAAGTGCGACCCTGGTTCCAGCATCGCGCGCATATGCATGTACGATTACGTTGCCCTGCCGATAGTCTGGAGTGTGAAGATCAACCTTTACCGCCATCAGGCGATGGTTGCGGGGCAGAACTGCAAAGCTGGTTTGAACCTCCAAAACCGGGAACAACAAAGCCTGAGAAGAAGACACCGCCTCCGTTGCCGCCTTCCTGCCAGGCGCTACTGGATGAGCACGTGATCTAA", - "dna_sequence_length": 825, - "functions": [ - "murein DD-endopeptidase" - ], - "id": "CDS_2313", - "location": [ - [ - "NC_000913", - 2446384, - "-", - 825 - ] - ], - "md5": "e79b0e1b015839cf8391bdc5455ea8aa", - "parent_gene": "", - "protein_md5": "d1aae2b452c937d9f0a6166ced75b9d7", - "protein_translation": "MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGCIVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPAGGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEIFSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPADSLECEDQPLPPSGDGCGAELQSWFEPPKPGTTKPEKKTPPPLPPSCQALLDEHVI", - "protein_translation_length": 274, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2329" - ], - [ - "gene_synonym", - "GI:16130264" - ], - [ - "gene_synonym", - "ASAP:ABE-0007693" - ], - [ - "gene_synonym", - "GeneID:946814" - ], - [ - "gene_synonym", - "JW2326" - ], - [ - "gene_synonym", - "aroC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P12008" - ], - [ - "gene_synonym", - "EcoGene:EG10075" - ], - [ - "gene_synonym", - "ECK2323" - ], - [ - "gene_synonym", - "NP_416832.1" - ] - ], - "dna_sequence": "ATGGCTGGAAACACAATTGGACAACTCTTTCGCGTAACCACCTTCGGCGAATCGCACGGGCTGGCGCTCGGCTGCATCGTCGATGGTGTTCCGCCAGGCATTCCGCTGACGGAAGCGGACCTGCAACATGACCTCGACCGTCGTCGCCCTGGGACATCGCGCTATACCACCCAGCGCCGCGAGCCGGATCAGGTCAAAATTCTCTCCGGTGTTTTTGAAGGCGTTACTACCGGCACCAGCATTGGCTTGTTGATCGAAAACACTGACCAGCGCTCTCAGGATTACAGTGCGATTAAGGACGTTTTCCGTCCAGGCCATGCCGATTACACCTACGAACAAAAATACGGTCTGCGCGATTATCGCGGCGGTGGACGTTCTTCCGCCCGCGAAACCGCCATGCGCGTGGCGGCAGGAGCTATTGCCAAAAAATATCTCGCCGAGAAATTTGGTATTGAAATCCGTGGCTGCCTGACCCAGATGGGCGACATTCCGCTGGATATCAAAGACTGGTCGCAGGTCGAGCAAAATCCGTTTTTTTGCCCGGACCCCGACAAAATCGACGCGTTAGACGAGTTGATGCGTGCGCTGAAAAAAGAGGGCGACTCCATCGGCGCTAAAGTCACCGTTGTTGCCAGTGGCGTTCCTGCCGGACTTGGCGAGCCGGTCTTTGACCGCCTGGATGCTGACATCGCCCATGCGCTGATGAGCATCAACGCGGTGAAAGGCGTGGAAATTGGCGACGGCTTTGACGTGGTGGCGCTGCGCGGCAGCCAGAACCGCGATGAAATCACCAAAGACGGTTTCCAGAGCAACCATGCGGGCGGCATTCTCGGCGGTATCAGCAGCGGGCAGCAAATCATTGCCCATATGGCGCTGAAACCGACCTCCAGCATTACCGTGCCGGGTCGTACCATTAACCGCTTTGGCGAAGAAGTTGAGATGATCACCAAAGGCCGTCACGATCCCTGTGTCGGGATCCGCGCAGTGCCGATCGCAGAAGCGATGCTGGCGATCGTTTTAATGGATCACCTGTTACGGCAACGGGCGCAAAATGCCGATGTGAAGACTGATATTCCACGCTGGTAA", - "dna_sequence_length": 1086, - "functions": [ - "chorismate synthase" - ], - "id": "CDS_2314", - "location": [ - [ - "NC_000913", - 2447473, - "-", - 1086 - ] - ], - "md5": "f0f133042badf87705bb0a27af70b2d8", - "parent_gene": "", - "protein_md5": "48e6499ecd1bd82dfa8d2b0ca019d341", - "protein_translation": "MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGIPLTEADLQHDLDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVFRPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQMGDIPLDIKDWSQVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGLGEPVFDRLDADIAHALMSINAVKGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGILGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEAMLAIVLMDHLLRQRAQNADVKTDIPRW", - "protein_translation_length": 361, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111419" - ], - [ - "gene_synonym", - "prmB" - ], - [ - "gene_synonym", - "yfcB" - ], - [ - "gene_synonym", - "ASAP:ABE-0007695" - ], - [ - "gene_synonym", - "b2330" - ], - [ - "gene_synonym", - "JW5841" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39199" - ], - [ - "gene_synonym", - "EcoGene:EG12449" - ], - [ - "gene_synonym", - "NP_416833.4" - ], - [ - "gene_synonym", - "GeneID:946805" - ], - [ - "gene_synonym", - "ECK2324" - ] - ], - "dna_sequence": "GTGGATAAAATTTTCGTTGATGAAGCAGTAAATGAGCTGCAAACCATTCAGGACATGTTGCGCTGGTCGGTGAGCCGCTTCAGCGCGGCAAATATCTGGTACGGTCACGGTACCGATAACCCGTGGGATGAAGCCGTACAGCTGGTGTTGCCTTCGCTCTACCTGCCGCTGGATATTCCGGAAGATATGCGCACCGCGCGTCTGACCTCCAGCGAAAAACACCGTATTGTTGAACGCGTGATCCGCCGCGTCAATGAACGCATTCCGGTGGCTTACCTGACCAACAAAGCGTGGTTCTGCGGCCATGAATTTTACGTCGATGAACGCGTGCTGGTGCCGCGCTCGCCGATTGGTGAACTGATCAACAATAAATTTGCCGGACTTATCAGCAAGCAACCGCAGCATATTTTAGATATGTGTACTGGTAGCGGCTGCATCGCCATTGCCTGTGCTTATGCCTTCCCGGATGCAGAAGTCGACGCGGTGGATATCTCTCCAGACGCGCTGGCGGTTGCTGAACAGAACATCGAAGAACACGGTCTGATCCACAACGTCATTCCGATTCGTTCCGATCTGTTCCGCGACTTGCCGAAAGTGCAGTACGACCTGATTGTCACTAACCCGCCGTATGTCGATGCGGAAGATATGTCCGACCTGCCAAACGAATACCGCCACGAGCCGGAACTGGGCCTGGCATCTGGCACTGACGGCCTGAAACTGACGCGTCGCATTCTCGGTAACGCGGCAGATTACCTTGCTGATGATGGCGTGTTGATTTGTGAAGTCGGCAACAGCATGGTACATCTTATGGAACAATATCCGGATGTTCCGTTCACCTGGCTGGAGTTTGATAACGGCGGCGATGGTGTGTTTATGCTCACCAAAGAGCAGCTTATTGCCGCACGAGAACATTTCGCGATTTATAAAGATTAA", - "dna_sequence_length": 933, - "functions": [ - "N5-glutamine methyltransferase" - ], - "id": "CDS_2315", - "location": [ - [ - "NC_000913", - 2448440, - "-", - 933 - ] - ], - "md5": "ccd3f1d3a2dacd5a9c8bb61ae7fd668d", - "parent_gene": "", - "protein_md5": "5be947384dd27fa2d2a2508e53a21ef7", - "protein_translation": "MDKIFVDEAVNELQTIQDMLRWSVSRFSAANIWYGHGTDNPWDEAVQLVLPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGELINNKFAGLISKQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYRHEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDVPFTWLEFDNGGDGVFMLTKEQLIAAREHFAIYKD", - "protein_translation_length": 310, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2328" - ], - [ - "gene_synonym", - "GeneID:944847" - ], - [ - "gene_synonym", - "GI:16130266" - ], - [ - "gene_synonym", - "yfcN" - ], - [ - "gene_synonym", - "ASAP:ABE-0007698" - ], - [ - "gene_synonym", - "NP_416834.1" - ], - [ - "gene_synonym", - "smrB" - ], - [ - "gene_synonym", - "EcoGene:EG14117" - ], - [ - "gene_synonym", - "b2331" - ], - [ - "gene_synonym", - "ECK2325" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8B2" - ] - ], - "dna_sequence": "ATGAAAAAGAAAACAACACTTAGCGAGGAGGACCAGGCTCTGTTTCGCCAGTTGATGGCGGGGACTCGCAAGATTAAGCAGGACACGATTGTCCACCGACCGCAGCGTAAAAAAATCAGCGAAGTGCCGGTGAAACGCTTGATCCAGGAGCAGGCTGATGCCAGCCATTATTTCTCCGATGAGTTTCAGCCGTTATTAAATACCGAAGGTCCGGTGAAATATGTTCGCCCGGATGTCAGCCATTTTGAGGCGAAGAAACTGCGCCGTGGCGATTATTCGCCGGAGTTGTTTTTGGATTTACACGGTCTGACGCAGCTGCAGGCCAAGCAGGAACTGGGGGCGTTGATTGCCGCCTGCCGCCGTGAACATGTGTTTTGCGCCTGCGTGATGCATGGGCACGGGAAGCATATTTTGAAGCAACAAACACCGCTGTGGCTGGCACAACATCCGCATGTGATGGCCTTTCATCAGGCACCAAAAGAGTATGGCGGTGATGCGGCGTTGTTGGTGTTGATTGAAGTCGAAGAGTGGCTGCCGCCGGAGTTGCCCTGA", - "dna_sequence_length": 552, - "functions": [ - "putative DNA endonuclease" - ], - "id": "CDS_2316", - "location": [ - [ - "NC_000913", - 2448606, - "+", - 552 - ] - ], - "md5": "1d292f8e5186eacce5515f3f77bed0ba", - "parent_gene": "", - "protein_md5": "173e7a05f33e34e22f1201d66fde48fd", - "protein_translation": "MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPVKRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHGLTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPKEYGGDAALLVLIEVEEWLPPELP", - "protein_translation_length": 183, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2329" - ], - [ - "gene_synonym", - "EcoGene:EG14118" - ], - [ - "gene_synonym", - "ASAP:ABE-0007700" - ], - [ - "gene_synonym", - "yfcO" - ], - [ - "gene_synonym", - "b2332" - ], - [ - "gene_synonym", - "GI:90111420" - ], - [ - "gene_synonym", - "GeneID:946620" - ], - [ - "gene_synonym", - "NP_416835.2" - ], - [ - "gene_synonym", - "ECK2326" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76498" - ] - ], - "dna_sequence": "ATGAAAATACTACGATGGTTGTTCGCTCTGGTCATGCTTATTGCTACTACAGAAGCTATGGCTGCCGGGCATAGCGTTGACGTTTACTACGGTTACAACGGTGATTCGCGTAATATTGCGACTTTTAATTTAAAAATAATGATGCCATCCGCAGTGTACGTTGGTGAATATAAAAGTAGTCAATGGCTCATGACTGGGGAAATATTGCAAAATGTGAGCTGGAGTGGTCCTCCTCCTGCCCCTTCGGTTAAGCTGATTGGCTACCATCAAAATATCAACAAAGCAAGTTGTCCTGGATTACCGTCTGGGTGGAACTGCGGGTATTATACATTTGAGGTTATTGTCTCTGCAGAGATTGAATCTTACTTTTCTTGTCCATGGTTGGTTATTATGAATGACTCTGAAGCCTCTCCAGGGGGCGTGACGTATCAGGGGCCTGATAGTCACGACACGATTTGTCCATCCGTTTCTGTTCAACCTTATGACGTTTCATGGAATGAGAATTATGTCAGTAAGTCAAAACTGCTCACCCTGCAGTCGACGGGCGGTGTGGTTGAGAAAACGCTTTCAACGTATTTGATGAAAGATGGGAAGTTGTGCGACAGTACGCAGATGAATGAAACAGGTGGTTACTGCCGCTGGGTTGCACAGATGATAACTTTTACCGCGTCGGGATGTGACAAGGCGGAAGTCTCGGTCACGCCAAATCGACACCCTATAACGGACAAACAGTTACACGATATGGTCGTGCGTGTTGATACCAGCAGTATGCAGCCAATCGATTCTACTTGCCGGTTCCAGTACATACTGAATGAGTTGTAG", - "dna_sequence_length": 822, - "functions": [ - "DUF2544 family putative outer membrane protein" - ], - "id": "CDS_2317", - "location": [ - [ - "NC_000913", - 2450049, - "-", - 822 - ] - ], - "md5": "e4cc049b2aaa25f48628e56531a967e3", - "parent_gene": "", - "protein_md5": "1ee8b6345d15bcef9d70da9b47e8ae17", - "protein_translation": "MKILRWLFALVMLIATTEAMAAGHSVDVYYGYNGDSRNIATFNLKIMMPSAVYVGEYKSSQWLMTGEILQNVSWSGPPPAPSVKLIGYHQNINKASCPGLPSGWNCGYYTFEVIVSAEIESYFSCPWLVIMNDSEASPGGVTYQGPDSHDTICPSVSVQPYDVSWNENYVSKSKLLTLQSTGGVVEKTLSTYLMKDGKLCDSTQMNETGGYCRWVAQMITFTASGCDKAEVSVTPNRHPITDKQLHDMVVRVDTSSMQPIDSTCRFQYILNEL", - "protein_translation_length": 273, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14119" - ], - [ - "gene_synonym", - "ASAP:ABE-0007702" - ], - [ - "gene_synonym", - "GI:16130268" - ], - [ - "gene_synonym", - "b2333" - ], - [ - "gene_synonym", - "ECK2327" - ], - [ - "gene_synonym", - "JW2330" - ], - [ - "gene_synonym", - "yfcP" - ], - [ - "gene_synonym", - "NP_416836.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76499" - ], - [ - "gene_synonym", - "GeneID:946788" - ] - ], - "dna_sequence": "ATGAATAAATCAATGATTCAGTCCGGTGGTTACGTCCTGTTAGCGGGGCTGATATTGGCAATGAGTAGCACGTTATTCGCGGCAGATAATAATCTGCATTTCTCCGGTAATTTATTAAGTAAATCCTGTGCGCTGGTGGTGGATGGCCAATATCTGGCAGAGGTGCGCTTTCCCACGGTCAGTCGTCAGGATTTGAACGTTGCAGGCCAGTCCGCTCGTGTACCCGTAGTCTTTAAGCTGAAAGATTGCAAAGGGCCGGCGGGATACAACGTAAAAGTCACGCTCACGGGGGTAGAAGACAGCGAACAACCCGGTTTTCTGGCACTGGATACGTCATCAACCGCTCAGGGAGTGGGAATTGGCATGGAAAAAACCGACGGAATGCAGGTTGCCATCAACAATACAAATGGGGCGACCTTTGCGCTAACCAATGGCAATAACGATATCAATTTCAGAGCCTGGCTACAGGCGAAAAGCGGCCGTGATGTGACGATCGGTGAATTTACCGCCTCTTTAACTGCGACATTTGAGTATATTTAA", - "dna_sequence_length": 540, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_2318", - "location": [ - [ - "NC_000913", - 2450590, - "-", - 540 - ] - ], - "md5": "82da71a2532558781a2fef8e13873ef3", - "parent_gene": "", - "protein_md5": "a1c02f54c40b2f48805cdf6882278af8", - "protein_translation": "MNKSMIQSGGYVLLAGLILAMSSTLFAADNNLHFSGNLLSKSCALVVDGQYLAEVRFPTVSRQDLNVAGQSARVPVVFKLKDCKGPAGYNVKVTLTGVEDSEQPGFLALDTSSTAQGVGIGMEKTDGMQVAINNTNGATFALTNGNNDINFRAWLQAKSGRDVTIGEFTASLTATFEYI", - "protein_translation_length": 179, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007705" - ], - [ - "gene_synonym", - "GeneID:946779" - ], - [ - "gene_synonym", - "GI:16130269" - ], - [ - "gene_synonym", - "b2334" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76500" - ], - [ - "gene_synonym", - "EcoGene:EG14120" - ], - [ - "gene_synonym", - "JW2331" - ], - [ - "gene_synonym", - "ECK2328" - ], - [ - "gene_synonym", - "yfcQ" - ], - [ - "gene_synonym", - "NP_416837.1" - ] - ], - "dna_sequence": "ATGAGAAAGACTTTCTTAACCCTGCTTTGTGTCAGTAGCGCCATAGCTCATGCTGCTGATGAAGACATCACCTTTCACGGGACATTATTGTCACCGCCAACCTGTAGCATCAGCGGTGGTAAAACCATTGAAGTCGAATTTCGCGATCTCATTATCGACGACATCAACGGCAACTATGGTCGTAAAGAGGTGCCATATGAACTCACTTGTGACTCGACGACCCGTCATCCAGATTGGGAGATGACCCTCACCTGGACTGGTACACAAACCAGTTTTAATGATGCAGCAATTGAAACTGATGTACCCGGTTTTGGTATCGAGCTTCAGCACGATGGTCAGCGTTTTAAACTCAATACTCCGCTTGCTATCAACGCCACTGATTTTACGCAAAAGCCGAAGCTGGAGGCCGTACCGGTAAAAGCGAGTGATGCTGTGTTAAGCGATACGAATTTTTCGGCTTACGCAACATTACGGGTGGATTATCAATGA", - "dna_sequence_length": 489, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_2319", - "location": [ - [ - "NC_000913", - 2451075, - "-", - 489 - ] - ], - "md5": "b8fe7b2cc93796c8897a51cc229b0df1", - "parent_gene": "", - "protein_md5": "98e401734573007e69d4c3791ddd2027", - "protein_translation": "MRKTFLTLLCVSSAIAHAADEDITFHGTLLSPPTCSISGGKTIEVEFRDLIIDDINGNYGRKEVPYELTCDSTTRHPDWEMTLTWTGTQTSFNDAAIETDVPGFGIELQHDGQRFKLNTPLAINATDFTQKPKLEAVPVKASDAVLSDTNFSAYATLRVDYQ", - "protein_translation_length": 162, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007707" - ], - [ - "gene_synonym", - "GI:16130270" - ], - [ - "gene_synonym", - "GeneID:946818" - ], - [ - "gene_synonym", - "b2335" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76501" - ], - [ - "gene_synonym", - "EcoGene:EG14121" - ], - [ - "gene_synonym", - "JW2332" - ], - [ - "gene_synonym", - "ECK2329" - ], - [ - "gene_synonym", - "NP_416838.1" - ], - [ - "gene_synonym", - "yfcR" - ] - ], - "dna_sequence": "ATGACGGGGGGAGTTATGAGTCAAAAGTTTGTAGTGGGCGCAGGGCTGCTGGTATGCAGTGTCTGTAGTTTATCTGCTATGGCTGGTAGTAAACCCGTGGATTTAATTCTGCGCGTGTTGGTCGATGCTCCGCCACCCTGTTCAATCAAGGGCAGCCAGGTAGAGTTCGGCAATATGATTGCTGATAACGTTGATGGCACCAATTATCGGCAAGATGCGAAATACACGTTGAACTGCACAAACAGTCTTGCTAACGACTTGCGGATGCAACTTAAGGGCAATACCTCAACGATTAACGGCGAAACGGTACTCAGTACCAATATCACCGGGCTGGGCATTCGGATAGAAAATAGCGCCGATAACTCATTGTTTGCCGTCGGTGAAAATAGCTGGACGCCATTTAATATCAATAACCAGCCACAGTTGAAGGCTGTACCTGTGAAGGCAAGCGGGGCGCAACTTGCTGCGGGCGAGTTTAACGCCAGTTTGACCATGGTGGTGGACTATCAATGA", - "dna_sequence_length": 513, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_2320", - "location": [ - [ - "NC_000913", - 2451584, - "-", - 513 - ] - ], - "md5": "b9130f8da849625f4457a0693f0ff23f", - "parent_gene": "", - "protein_md5": "2a3c5f7d12bc32917bdffe843af34763", - "protein_translation": "MTGGVMSQKFVVGAGLLVCSVCSLSAMAGSKPVDLILRVLVDAPPPCSIKGSQVEFGNMIADNVDGTNYRQDAKYTLNCTNSLANDLRMQLKGNTSTINGETVLSTNITGLGIRIENSADNSLFAVGENSWTPFNINNQPQLKAVPVKASGAQLAAGEFNASLTMVVDYQ", - "protein_translation_length": 170, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130271" - ], - [ - "gene_synonym", - "b2336" - ], - [ - "gene_synonym", - "NP_416839.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007709" - ], - [ - "gene_synonym", - "EcoGene:EG14122" - ], - [ - "gene_synonym", - "JW2333" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77599" - ], - [ - "gene_synonym", - "yfcS" - ], - [ - "gene_synonym", - "ECK2330" - ], - [ - "gene_synonym", - "GeneID:946418" - ] - ], - "dna_sequence": "ATGTCTGATTTACTTTGCTCTGCCAAATTGGGTGCTATGACGCTGGCGTTACTGCTTAGCGCTACCAGTTTGTCTGCCCTGGCGTCTGTAACGCCAGATCGTACCCGTTTGATATTTAATGAAAGCGACAAATCAATCAGCGTGACGCTGCGTAATAACGATCCGAAACTCCCTTATCTGGCTCAAAGCTGGATTGAAGATGAAAAGGGTAACAAGATCACCTCGCCGTTAACTGTGCTGCCGCCAGTGCAACGCATCGATTCAATGATGAACGGGCAGGTAAAAGTGCAGGGAATGCCGGATATCAACAAATTGCCAGCCGATCGTGAAAGCATGTTCTACTTTAACGTGCGCGAGATCCCGCCAAAATCAAACAAACCCAATACCCTGCAAATCGCGCTGCAAACGCGTATCAAGTTGTTCTGGCGACCAAAGGCGCTGGAAAAGGTCAGTATGAAAAGTCCGTGGCAGCACAAGGTGACGCTCACCCGCAGCGGTCAGGCATTTACCGTCAATAACCCAACGCCGTACTACGTGATTATCAGCAACGCCAGTGCGCAGAAAAACGGTAATCCAGCTGCAGGGTTCTCGCCTCTGGTCATTGAGCCGAAAACCACGGTACCGCTGAATGTGAAAATGGATAGCGTACCGGTGCTGACTTACGTCAACGACTTTGGCGCACGGATGCCGCTGTTCTTCCAGTGCAATGGCAACAGCTGCCAGGTGGATGAAGAGCAGAGCCGCAAAGGCTGA", - "dna_sequence_length": 753, - "functions": [ - "putative periplasmic pilin chaperone" - ], - "id": "CDS_2321", - "location": [ - [ - "NC_000913", - 2452336, - "-", - 753 - ] - ], - "md5": "a33111579160872a5433ef1c7b483430", - "parent_gene": "", - "protein_md5": "54da8f75d4446d58c276021d8a45f9c3", - "protein_translation": "MSDLLCSAKLGAMTLALLLSATSLSALASVTPDRTRLIFNESDKSISVTLRNNDPKLPYLAQSWIEDEKGNKITSPLTVLPPVQRIDSMMNGQVKVQGMPDINKLPADRESMFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALEKVSMKSPWQHKVTLTRSGQAFTVNNPTPYYVIISNASAQKNGNPAAGFSPLVIEPKTTVPLNVKMDSVPVLTYVNDFGARMPLFFQCNGNSCQVDEEQSRKG", - "protein_translation_length": 250, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77196" - ], - [ - "gene_synonym", - "ASAP:ABE-0007711" - ], - [ - "gene_synonym", - "ASAP:ABE-0007713" - ], - [ - "gene_synonym", - "JW2334" - ], - [ - "gene_synonym", - "b4661" - ], - [ - "gene_synonym", - "EcoGene:EG14124" - ], - [ - "gene_synonym", - "GeneID:1450268" - ], - [ - "gene_synonym", - "yfcT" - ], - [ - "gene_synonym", - "yfcU" - ], - [ - "gene_synonym", - "ECK2332" - ] - ], - "dna_sequence": "ATGCCTGACCATTCTCTTTTTCGATTACGGATTCTTCCGTGGTGCATTGCGCTGGCAATGTCAGGGAGTTATAGCAGTGTCTGGGCTGAAGACGACATTCAGTTTGATTCCCGTTTTCTGGAATTAAAAGGCGACACAAAAATTGATCTGAAGCGTTTTTCCAGCCAGGGGTATGTTGAGCCCGGAAAATACAATTTACAGGTTCAACTAAATAAACAGCCATTGGCGGAAGAGTACGATATTTACTGGTATGCTGGTGAAGATGACGTTAGCAAAAGCTATGCTTGTCTGACACCGGAACTGGTGGCGCAGTTTGGTTTAAAAGAAGACGTGGCGAAAAATCTGCAATGGAGCCACGATGGTAAATGCCTGAAGCCCGGTCAACTGGAAGGCGTGGAAATTAAGGCTGATTTAAGCCAGTCCGCATTAGTCATTTCACTACCGCAGGCTTACCTCGAATATACCTGGCCCGACTGGGATCCACCTTCTCGTTGGGATGATGGCATCTCCGGGATCATTGCGGACTACAGCATCACTGCGCAAACACGACACGAAGAAAATGGCGGCGATGACAGTAACGAGATCAGCGGCAACGGGACGGTCGGGGTTAACCTGGGGCCATGGCGTATGCGCGCTGACTGGCAGACCAACTATCAACATACGCGCAGTAATGATGATGACGATGAATTTGGCGGCGATGACACACAAAAAAAATGGGAGTGGAGTCGCTATTATGCCTGGCGGGCGTTACCGTCATTAAAAGCCAAACTGGCGCTGGGCGAAGATTACCTCAATTCCGATATTTTCGACGGTTTTAATTATGTTGGTGGCAGTGTCAGCACTGACGATCAAATGTTGCCTCCCAATCTGCGCGGCTACGCGCCAGACATTTCCGGCGTGGCACACACCACAGCAAAAGTGACCGTCAGCCAGATGGGGCGTGTGATTTACGAAACGCAGGTTCCGGCTGGACCGTTTCGTATTCAGGATCTTGGTGATTCCGTCTCCGGTACGTTGCATATTCGCATTGAAGAACAGAACGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTCACTCGCCCAGGCCAGGTTCGCTATAAGATCATGATGGGACGTCCGCAAGAGTGGGGCCACCATGTCGAGGGGGGATTTTTCTCTGGTGCTGAAGCCTCCTGGGGCATCGCTAACGGCTGGTCGTTATATGGCGGTGCGCTGGGTGATGAAAACTATCAGTCTGCGGCGCTGGGCGTCGGTCGCGATTTGTCTACCTTCGGCGCGGTCGCGTTTGATGTTACTCATTCGCATACCAAACTGGATAAAGACACCGCTTATGGCAAAGGTTCGCTGGACGGTAACTCCTTCCGTGTGAGTTATTCCAAAGACTTTGACCAGCTCAACAGCCGCGTCACTTTCGCTGGATATCGCTTCTCGGAAGAGAACTTTATGACCATGAGCGAGTATCTGGATGCCAGTGACAGCGAAATGGTCCGTACGGGCAACGACAAAGAGATGTACACCGCCACTTATAACCAGAACTTCCGCGATGCGGGTGTTTCGGTTTATCTCAACTATACCCGCCATACCTACTGGGATCGTGAGGAGCAGACAAACTACAACATCATGCTCTCCCACTATTTCAATATGGGCAGCATTCGTAATATGAGCGTTTCCCTGACTGGCTACCGCTACGAGTATGACAACCGGGCGGATAAGGGCATGTAGATTTCGCTCAGTATGCCGTGGGGCGACAACAGTACCGTTAGCTATAACGGCAACTATGGCAGTGGGACGGACAGCAGCCAGGTCGGTTATTTTAGCCGTGTCGATGACGCGACTCACTATCAGTTGAACATCGGCACCAGTGACAAACACACCAGCGTTGATGGCTACTACAGCCATGATGGTTCGCTGGCGCAGGTTGACCTCAGTGCGAACTACCATGAAGGGCAATACACCTCTGCGGGCTTGTCGTTACAGGGCGGCGCAACGCTTACTACCCACGGCGGCGCACTTCACCGTACCCAGAATATGGGCGGGACACGCCTGCTGATTGATGCCGATGGCGTTGCCGATGTTCCGGTGGAAGGTAACGGGGCTGCTGTTTATACCAATATGTTTGGTAAAGCCGTCGTTTCTGACGTTAACAATTATTATCGCAATCAGGCGTATATCGACCTCAACAAATTGCCGGAAAACGCCGAAGCAACCCAGTCGGTGGTGCAAGCCACGCTAACTGAAGGAGCCATTGGCTACCGCAAATTTGCCGTCATCAGTGGTCAAAAAGCGATGGCGGTGCTGCGTTTACAAGATGGCAGCCATCCACCGTTTGGCGCAGAAGTAAAAAATGATAACGAGCAGACAGTGGGCCTTGTCGATGATGACGGTAGTGTCTATCTGGCTGGGGTGAAACCTGGCGAACATATGAGTGTGTTCTGGAGTGGTGTTGCGCATTGCGATATCAACCTGCCGGACCCGCTGCCTGCCGATCTGTTTAACGGCTTGTTACTGCCATGCCAGCATAAAGGCAACGTCGCGCCGGTTGTTCCTGATGACATAAAGCCTGTCATTCAGGAGCAGACGCAACAGGTGACACCCACCGATCCCCCTGTTTCTGTTTCAGCTAACCAATAA", 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"GeneID:949109" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77288" - ], - [ - "gene_synonym", - "b2339" - ], - [ - "gene_synonym", - "ASAP:ABE-0007715" - ], - [ - "gene_synonym", - "JW2336" - ], - [ - "gene_synonym", - "EcoGene:EG14125" - ], - [ - "gene_synonym", - "ECK2333" - ], - [ - "gene_synonym", - "yfcV" - ], - [ - "gene_synonym", - "NP_416841.1" - ] - ], - "dna_sequence": "ATGAGTAAGTTTGTTAAAACAGCTATTGCTGCGGCAATGGTGATGGGCGCGTTCACCTCTACGGCAACAATCGCTGCGGGTAACAACGGTACTGCACGTTTTTACGGCACCATTGAAGACTCAGTGTGTTCTATCGTTCCGGACGATCACAAACTGGAAGTTGATATGGGTGATATCGGTGCCGAAAAACTGAAAAATAACGGCACCACCACGCCGAAAAATTTCCAGATTCGCCTGCAAGATTGCGTATTTGATACTCAGGAAACAATGACCACTACCTTTACTGGTACCGTTTCTTCTGCAAATAGCGGCAATTATTACACCATTTTCAATACCGATACCGGTGCGGCATTTAACAATGTTAGCCTGGCGATCGGTGACTCTCTGGGTACCTCTTACAAAAGCGGCATGGGTATTGACCAGAAAATCGTGAAAGATACTGCCACTAATAAAGGCAAAGCGAAGCAGACTCTGAACTTTAAAGCCTGGCTGGTCGGCGCAGCTGATGCGCCAGATCTGGGTAATTTCGAAGCAAATACCACCTTCCAGATTACTTACCTGTAA", - "dna_sequence_length": 564, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_2323", - "location": [ - [ - "NC_000913", - 2455646, - "-", - 564 - ] - ], - "md5": "bb859ccf49fcba1a13bec8a6ccf54446", - "parent_gene": "", - "protein_md5": "d5af549ce6b88312c9990806155953c4", - "protein_translation": "MSKFVKTAIAAAMVMGAFTSTATIAAGNNGTARFYGTIEDSVCSIVPDDHKLEVDMGDIGAEKLKNNGTTTPKNFQIRLQDCVFDTQETMTTTFTGTVSSANSGNYYTIFNTDTGAAFNNVSLAIGDSLGTSYKSGMGIDQKIVKDTATNKGKAKQTLNFKAWLVGAADAPDLGNFEANTTFQITYL", - "protein_translation_length": 187, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416842.1" - ], - [ - "gene_synonym", - "GI:16130273" - ], - [ - "gene_synonym", - "GeneID:946815" - ], - [ - "gene_synonym", - "JW2337" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76502" - ], - [ - "gene_synonym", - "EcoGene:EG14126" - ], - [ - "gene_synonym", - "ASAP:ABE-0007720" - ], - [ - "gene_synonym", - "ECK2334" - ], - [ - "gene_synonym", - "sixA" - ], - [ - "gene_synonym", - "b2340" - ], - [ - "gene_synonym", - "yfcW" - ] - ], - "dna_sequence": "ATGCAAGTTTTTATCATGCGTCACGGCGACGCAGCCCTCGATGCCGCCAGTGATTCCGTTCGTCCTCTGACCACTAATGGTTGTGACGAATCTCGCCTGATGGCGAACTGGCTGAAAGGTCAAAAAGTGGAAATCGAACGCGTTCTGGTGAGCCCGTTCCTGCGAGCCGAGCAAACACTGGAAGAAGTAGGGGATTGTCTGAACCTGCCTTCCAGTGCAGAAGTTCTGCCGGAGTTAACGCCCTGCGGCGATGTTGGTCTGGTCAGTGCCTATTTGCAGGCGTTGACCAATGAAGGTGTTGCTTCGGTACTGGTGATCTCTCACTTACCGTTAGTCGGGTATCTGGTTGCCGAGTTATGTCCGGGCGAAACGCCGCCTATGTTTACCACCTCGGCCATTGCCAGCGTAACGCTTGATGAAAGCGGAAACGGCACATTCAACTGGCAGATGAGCCCGTGTAATCTGAAGATGGCAAAAGCTATCTGA", - "dna_sequence_length": 486, - "functions": [ - "phosphohistidine phosphatase" - ], - "id": "CDS_2324", - "location": [ - [ - "NC_000913", - 2456812, - "-", - 486 - ] - ], - "md5": "54a6e6e36da7b4bced7ff2c10be02cbc", - "parent_gene": "", - "protein_md5": "bc7bf55eca457e7f3382f1100b079077", - "protein_translation": "MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKAI", - "protein_translation_length": 161, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007723" - ], - [ - "gene_synonym", - "GI:16130274" - ], - [ - "gene_synonym", - "GeneID:949097" - ], - [ - "gene_synonym", - "NP_416843.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77399" - ], - [ - "gene_synonym", - "yfcX" - ], - [ - "gene_synonym", - "EcoGene:EG14127" - ], - [ - "gene_synonym", - "ECK2335" - ], - [ - "gene_synonym", - "fadJ" - ], - [ - "gene_synonym", - "b2341" - ], - [ - "gene_synonym", - "JW2338" - ] - ], - "dna_sequence": "ATGGAAATGACATCAGCGTTTACCCTTAATGTTCGTCTGGACAACATTGCCGTTATCACCATCGACGTACCGGGTGAGAAAATGAATACCCTGAAGGCGGAGTTTGCCTCGCAGGTGCGCGCCATTATTAAGCAACTCCGTGAAAACAAAGAGTTGCGAGGCGTGGTGTTTGTCTCCGCTAAACCGGACAACTTCATTGCTGGCGCAGACATCAACATGATCGGCAACTGCAAAACGGCGCAAGAAGCGGAAGCTCTGGCGCGGCAGGGCCAACAGTTGATGGCGGAGATTCATGCTTTGCCCATTCAGGTTATCGCGGCTATTCATGGCGCTTGCCTGGGTGGTGGGCTGGAGTTGGCGCTGGCGTGCCACGGTCGCGTTTGTACTGACGATCCTAAAACGGTGCTCGGTTTGCCTGAAGTACAACTTGGATTGTTACCCGGTTCAGGCGGCACCCAGCGTTTACCGCGTCTGATAGGCGTCAGCACAGCATTAGAGATGATCCTCACCGGAAAACAACTTCGGGCGAAACAGGCATTAAAGCTGGGGCTGGTGGATGACGTTGTTCCGCACTCCATTCTGCTGGAAGCCGCTGTTGAGCTGGCAAAGAAGGAGCGCCCATCTTCCCGCCCTCTACCTGTACGCGAGCGTATTCTGGCGGGGCCGTTAGGTCGTGCGCTGCTGTTCAAAATGGTCGGCAAGAAAACAGAACACAAAACTCAAGGCAATTATCCGGCGACAGAACGCATCCTGGAGGTTGTTGAAACGGGATTAGCGCAGGGCACCAGCAGCGGTTATGACGCCGAAGCTCGGGCGTTTGGCGAACTGGCGATGACGCCACAATCGCAGGCGCTGCGTAGTATCTTTTTTGCCAGTACGGACGTGAAGAAAGATCCCGGCAGTGATGCGCCGCCTGCGCCATTAAACAGCGTGGGGATTTTAGGTGGTGGCTTGATGGGCGGCGGTATTGCTTATGTCACTGCTTGTAAAGCGGGGATTCCGGTCAGAATTAAAGATATCAACCCGCAGGGCATAAATCATGCGCTGAAGTACAGTTGGGATCAGCTGGAGGGCAAAGTTCGCCGTCGTCATCTCAAAGCCAGCGAACGTGACAAACAGCTGGCATTAATCTCCGGAACGACGGACTATCGCGGCTTTGCCCATCGCGATCTGATTATTGAAGCGGTGTTTGAAAATCTCGAATTGAAACAACAGATGGTGGCGGAAGTTGAGCAAAATTGCGCCGCTCATACCATCTTTGCTTCGAATACGTCATCTTTACCGATTGGTGATATCGCCGCTCACGCCACGCGACCTGAGCAAGTTATCGGCCTGCATTTCTTCAGTCCGGTGGAAAAAATGCCGCTGGTGGAGATTATTCCTCATGCGGGGACATCGGCGCAAACCATCGCTACCACAGTAAAACTGGCGAAAAAACAGGGTAAAACGCCAATTGTCGTGCGTGACAAAGCCGGTTTTTACGTCAATCGCATCTTAGCGCCTTACATTAATGAAGCTATCCGCATGTTGACCCAAGGTGAACGGGTAGAGCACATTGATGCCGCGCTAGTGAAATTTGGTTTTCCGGTAGGCCCAATCCAACTTTTGGATGAGGTAGGAATCGACACCGGGACTAAAATTATTCCTGTACTGGAAGCCGCTTATGGAGAACGTTTTAGCGCGCCTGCAAATGTTGTTTCTTCAATTTTGAACGACGATCGCAAAGGCAGAAAAAATGGCCGGGGTTTCTATCTTTATGGTCAGAAAGGGCGTAAAAGCAAAAAACAGGTCGATCCCGCCATTTACCCGCTGATTGGCACACAAGGGCAGGGGCGAATCTCCGCACCGCAGGTTGCTGAACGGTGTGTGATGTTGATGCTGAATGAAGCAGTACGTTGTGTTGATGAGCAGGTTATCCGTAGCGTGCGTGACGGGGATATTGGCGCGGTATTTGGCATTGGTTTTCCGCCATTTCTCGGTGGACCGTTCCGCTATATCGATTCTCTCGGCGCGGGCGAAGTGGTTGCAATAATGCAACGACTTGCCACGCAGTATGGTTCCCGTTTTACCCCTTGCGAGCGTTTGGTCGAGATGGGCGCGCGTGGGGAAAGTTTTTGGAAAACAACTGCAACTGACCTGCAATAA", - "dna_sequence_length": 2145, - "functions": [ - "enoyl-CoA hydratase/epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase" - ], - "id": "CDS_2325", - "location": [ - [ - "NC_000913", - 2459159, - "-", - 2145 - ] - ], - "md5": "cff96a24b303d9d44b88d0b84a184235", - "parent_gene": "", - "protein_md5": "a8e94f72da7fdfee1e06807df0f9b845", - "protein_translation": "MEMTSAFTLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIQVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPGSDAPPAPLNSVGILGGGLMGGGIAYVTACKAGIPVRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGTQGQGRISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARGESFWKTTATDLQ", - "protein_translation_length": 714, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007725" - ], - [ - "gene_synonym", - "GI:16130275" - ], - [ - "gene_synonym", - "GeneID:948823" - ], - [ - "gene_synonym", - "yfcY" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76503" - ], - [ - "gene_synonym", - "NP_416844.1" - ], - [ - "gene_synonym", - "fadI" - ], - [ - "gene_synonym", - "EcoGene:EG14128" - ], - [ - "gene_synonym", - "b2342" - ], - [ - "gene_synonym", - "ECK2336" - ], - [ - "gene_synonym", - "JW2339" - ] - ], - "dna_sequence": "ATGGGTCAGGTTTTACCGCTGGTTACCCGCCAGGGCGATCGTATCGCCATTGTTAGCGGTTTACGTACGCCTTTTGCCCGTCAGGCGACGGCTTTTCATGGCATTCCCGCGGTTGATTTAGGGAAGATGGTGGTAGGCGAACTGCTGGCACGCAGCGAGATCCCCGCCGAAGTGATTGAACAACTGGTCTTTGGTCAGGTCGTACAAATGCCTGAAGCCCCCAACATTGCGCGTGAAATTGTTCTCGGTACGGGAATGAATGTACATACCGATGCTTACAGCGTCAGCCGCGCTTGCGCTACCAGTTTCCAGGCAGTTGCAAACGTCGCAGAAAGCCTGATGGCGGGAACTATTCGAGCGGGGATTGCCGGTGGGGCAGATTCCTCTTCGGTATTGCCAATTGGCGTCAGTAAAAAACTGGCGCGCGTGCTGGTTGATGTCAACAAAGCTCGTACCATGAGCCAGCGACTGAAACTCTTCTCTCGCCTGCGTTTGCGCGACTTAATGCCCGTACCACCTGCGGTAGCAGAATATTCTACCGGCTTGCGGATGGGCGACACCGCAGAGCAAATGGCGAAAACCTACGGCATCACCCGAGAACAGCAAGATGCATTAGCGCACCGTTCGCATCAGCGTGCCGCTCAGGCATGGTCAGACGGAAAACTCAAAGAAGAGGTGATGACTGCCTTTATCCCTCCTTATAAACAACCGCTTGTCGAAGACAACAATATTCGCGGTAATTCCTCGCTTGCCGATTACGCAAAGCTGCGCCCGGCGTTTGATCGCAAACACGGAACGGTAACGGCGGCAAACAGTACGCCGCTGACCGATGGCGCGGCAGCGGTGATCCTGATGACTGAATCCCGGGCGAAAGAATTAGGGCTGGTGCCGCTGGGGTATCTGCGCAGCTACGCATTTACTGCGATTGATGTCTGGCAGGACATGTTGCTCGGTCCAGCCTGGTCAACACCGCTGGCGCTGGAGCGTGCCGGTTTGACGATGAGCGATCTGACATTGATCGATATGCACGAAGCCTTTGCAGCTCAGACGCTGGCGAATATTCAGTTGCTGGGTAGTGAACGTTTTGCTCGTGAAGCACTGGGGCGTGCACATGCCACTGGCGAAGTGGACGATAGCAAATTTAACGTGCTTGGCGGTTCGATTGCTTACGGGCATCCCTTCGCGGCGACCGGCGCGCGGATGATTACCCAGACATTGCATGAACTTCGCCGTCGCGGCGGTGGATTTGGTTTAGTTACCGCCTGTGCTGCCGGTGGGCTTGGCGCGGCAATGGTTCTGGAGGCGGAATAA", - "dna_sequence_length": 1311, - "functions": [ - "beta-ketoacyl-CoA thiolase, anaerobic, subunit" - ], - "id": "CDS_2326", - "location": [ - [ - "NC_000913", - 2460469, - "-", - 1311 - ] - ], - "md5": "90cafdfb41a63e8fcf81201432ae7b0a", - "parent_gene": "", - "protein_md5": "4c91de5c91649883675fd57c3e8177f0", - "protein_translation": "MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE", - "protein_translation_length": 436, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007731" - ], - [ - "gene_synonym", - "GeneID:948817" - ], - [ - "gene_synonym", - "GI:90111421" - ], - [ - "gene_synonym", - "yfcZ" - ], - [ - "gene_synonym", - "JW2340" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD33" - ], - [ - "gene_synonym", - "NP_416845.2" - ], - [ - "gene_synonym", - "EcoGene:EG14129" - ], - [ - "gene_synonym", - "ECK2337" - ], - [ - "gene_synonym", - "b2343" - ] - ], - "dna_sequence": "ATGAGTAAATGTAGTGCTGATGAAACCCCGGTTTGCTGCTGTATGGATGTTGGCACCATTATGGACAACTCCGACTGCACCGCGTCTTACAGCCGCGTGTTTGCAAACCGCGCAGAAGCAGAGCAAACGCTGGCGGCGCTGACTGAAAAAGCCCGTAGCGTGGAATCTGAACCTTGCAAAATCACCCCGACTTTCACTGAAGAGTCTGACGGTGTGCGCCTGGATATCGATTTCACTTTTGCCTGCGAAGCTGAAATGCTGATTTTCCAGCTGGGTCTGCGTTAA", - "dna_sequence_length": 285, - "functions": [ - "UPF0381 family protein" - ], - "id": "CDS_2327", - "location": [ - [ - "NC_000913", - 2460934, - "-", - 285 - ] - ], - "md5": "17fe970ca8af4702ba1b0d606977df56", - "parent_gene": "", - "protein_md5": "1de40c116bd26f06f23127c4d2cb796e", - "protein_translation": "MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTLAALTEKARSVESEPCKITPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR", - "protein_translation_length": 94, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946820" - ], - [ - "gene_synonym", - "ttr" - ], - [ - "gene_synonym", - "EcoGene:EG10280" - ], - [ - "gene_synonym", - "NP_416846.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0007740" - ], - [ - "gene_synonym", - "JW2341" - ], - [ - "gene_synonym", - "ECK2338" - ], - [ - "gene_synonym", - "b2344" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10384" - ], - [ - "gene_synonym", - "GI:145698292" - ], - [ - "gene_synonym", - "fadL" - ] - ], - "dna_sequence": "ATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTTTCTTCCTCTGGCCTGGGCCGGGCTTATTCAGGGGAAGGCGCAATTGCCGATGATGCAGGTAACGTCAGCCGTAACCCCGCATTGATTACTATGTTTGACCGCCCGACATTTTCTGCGGGTGCGGTTTATATTGACCCGGATGTAAATATCAGCGGAACGTCTCCATCTGGTCGTAGCCTGAAAGCCGATAACATCGCGCCTACGGCATGGGTTCCGAACATGCACTTTGTTGCACCGATTAACGACCAATTTGGTTGGGGCGCTTCTATTACCTCTAACTATGGTCTGGCTACAGAGTTTAACGATACTTATGCAGGCGGCTCTGTCGGGGGTACAACCGACCTTGAAACCATGAACCTGAACTTAAGCGGTGCGTATCGCTTAAATAATGCATGGAGCTTTGGTCTTGGTTTCAACGCCGTCTACGCTCGCGCGAAAATTGAACGTTTCGCAGGCGATCTGGGGCAGTTGGTTGCTGGCCAAATTATGCAATCTCCTGCTGGCCAAACTCAGCAAGGGCAAGCATTGGCAGCTACCGCCAACGGTATTGACAGTAATACCAAAATCGCTCATCTGAACGGTAACCAGTGGGGCTTTGGCTGGAACGCCGGAATCCTGTATGAACTGGATAAAAATAACCGCTATGCACTGACCTACCGTTCTGAAGTGAAAATTGACTTCAAAGGTAACTACAGCAGCGATCTTAATCGTGCGTTTAATAACTACGGTTTGCCAATTCCTACCGCGACAGGTGGCGCAACGCAATCGGGTTATCTGACGCTGAACCTGCCTGAAATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCATTCCGGACCAGGACCGTTTCTGGCTGAGTGCAGGTACGACTTACGCATTTAATAAAGATGCTTCAGTCGACGTTGGTGTTTCTTATATGCACGGTCAGAGCGTGAAAATTAACGAAGGCCCATACCAGTTCGAGTCTGAAGGTAAAGCCTGGCTGTTCGGTACTAACTTTAACTACGCGTTCTGA", - "dna_sequence_length": 1341, - "functions": [ - "long-chain fatty acid outer membrane transporter" - ], - "id": "CDS_2328", - "location": [ - [ - "NC_000913", - 2461306, - "+", - 1341 - ] - ], - "md5": "a07e7c016ed3beb93d87c424fae51390", - "parent_gene": "", - "protein_md5": "8dfaec223bf7e999958f9ce5367485e1", - "protein_translation": "MSQKTLFTKSALAVAVALISTQAWSAGFQLNEFSSSGLGRAYSGEGAIADDAGNVSRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTAWVPNMHFVAPINDQFGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYRLNNAWSFGLGFNAVYARAKIERFAGDLGQLVAGQIMQSPAGQTQQGQALAATANGIDSNTKIAHLNGNQWGFGWNAGILYELDKNNRYALTYRSEVKIDFKGNYSSDLNRAFNNYGLPIPTATGGATQSGYLTLNLPEMWEVSGYNRVDPQWAIHYSLAYTSWSQFQQLKATSTSGDTLFQKHEGFKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRFWLSAGTTYAFNKDASVDVGVSYMHGQSVKINEGPYQFESEGKAWLFGTNFNYAF", - "protein_translation_length": 446, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946819" - ], - [ - "gene_synonym", - "EcoGene:EG14130" - ], - [ - "gene_synonym", - "yfdF" - ], - [ - "gene_synonym", - "NP_416847.1" - ], - [ - "gene_synonym", - "GI:16130278" - ], - [ - "gene_synonym", - "JW2342" - ], - [ - "gene_synonym", - "ASAP:ABE-0007743" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76505" - ], - [ - "gene_synonym", - "ECK2339" - ], - [ - "gene_synonym", - "b2345" - ] - ], - "dna_sequence": "ATGCTACCATCTATTTCAATCAACAATACCAGCGCAGCTTACCCAGAATCCATCAATGAAAATAACAATGATGAAGTTAATGGATTAGTACAAGAGTTCAAAAACCTTTTTAATGGTAAGGAAGGAATAAGCACCTGTATTAAACATCTACTTGAGCTTATAAAAAACGCCATACGAGTAAACGACGATCCTTATAGATTTAATATTAATAATTCCTCAGTTACTTATATTGATATTGACTCCAATGATACAGACCATATTACTATTGGTATCGACAACCAAGAACCAATAGAATTACCTGCGAACTATAAAGACAAAGAACTCGTCCGTACTATCATTAATGACAACATAGTTGAGAAGACTCATGATATCAATAACAAGGAAATGATCTTCAGCGCATTAAAAGAAATATATGATGGAGATCCTGGTTTTATCTTCGATAAGATATCACACAAACTCAGACATACGGTAACGGAATTTGATGAGAGCGGGAAAAGCGAACCAACGGACTTATTTACCTGGTACGGTAAAGATAAAAAAGGCGACTCTCTCGCTATTGTAATTAAAAATAAAAACGGAAATGATTACTTATCTCTCGGTTACTACGATCAGGACGACTACCACATTCAAAGAGGAATTCGTATTAATGGTGATAGTCTCACCCAATATTGTAGTGAAAACGCCAGGAGTGCTTCAGCGTGGTTTGAAAGCAGTAAAGCTATCATGGCAGAATCATTTGCAACTGGTTCCGATCATCAGGTTGTAAACGAGCTCAACGGGGAAAGACTGAGAGAACCAAACGACGTTTTTAAACGTTATGGTCGAGCAATAAGATATGATTTTCAAGTGGACGATGCAAAATATAAATGCGACCATCTAAAAGAAATAGTTTCTACTTTAGTCGGTAACAAAATTAACGTTGGCCATTCTCAAAAAATATATAAGCATTTTAAGGATCTCGAAGGTAAAATTGAAGAAAGGCTTCAAAATCGCCAGGCTGAATATCAAAATGAAATTAATCAACCATCTGCGCCAGGTGTTAATTTTGATGATATTTAA", - "dna_sequence_length": 1059, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2329", - "location": [ - [ - "NC_000913", - 2463012, - "+", - 1059 - ] - ], - "md5": "c1d91a65ec0da4351a2af5d438803a34", - "parent_gene": "", - "protein_md5": "afe8423dafa8f313febc28fc3e17296e", - "protein_translation": "MLPSISINNTSAAYPESINENNNDEVNGLVQEFKNLFNGKEGISTCIKHLLELIKNAIRVNDDPYRFNINNSSVTYIDIDSNDTDHITIGIDNQEPIELPANYKDKELVRTIINDNIVEKTHDINNKEMIFSALKEIYDGDPGFIFDKISHKLRHTVTEFDESGKSEPTDLFTWYGKDKKGDSLAIVIKNKNGNDYLSLGYYDQDDYHIQRGIRINGDSLTQYCSENARSASAWFESSKAIMAESFATGSDHQVVNELNGERLREPNDVFKRYGRAIRYDFQVDDAKYKCDHLKEIVSTLVGNKINVGHSQKIYKHFKDLEGKIEERLQNRQAEYQNEINQPSAPGVNFDDI", - "protein_translation_length": 352, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945582" - ], - [ - "gene_synonym", - "mlaA" - ], - [ - "gene_synonym", - "GI:16130279" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76506" - ], - [ - "gene_synonym", - "ECK2340" - ], - [ - "gene_synonym", - "vacJ" - ], - [ - "gene_synonym", - "JW2343" - ], - [ - "gene_synonym", - "EcoGene:EG14276" - ], - [ - "gene_synonym", - "ASAP:ABE-0007745" - ], - [ - "gene_synonym", - "b2346" - ], - [ - "gene_synonym", - "NP_416848.1" - ] - ], - "dna_sequence": "ATGAAGCTTCGCCTGTCGGCGCTTGCTCTGGGAACTACGCTTCTGGTGGGGTGTGCGAGTTCCGGTACAGATCAGCAAGGGCGTTCTGACCCGTTAGAAGGGTTCAACCGCACCATGTACAACTTCAACTTCAATGTATTAGACCCGTATATTGTTCGACCGGTCGCTGTCGCCTGGCGTGATTATGTTCCGCAACCGGCGCGTAACGGTTTGAGCAACTTTACTGGCAACCTTGAAGAACCTGCGGTGATGGTTAACTACTTCTTGCAGGGCGACCCTTATCAGGGGATGGTCCACTTTACCCGCTTTTTCCTGAACACCATTTTGGGGATGGGCGGTTTTATTGATGTTGCAGGGATGGCGAACCCGAAACTGCAACGGACTGAACCTCACCGCTTCGGTAGTACGCTTGGTCATTATGGCGTGGGTTATGGGCCTTACGTTCAGTTACCGTTCTACGGTAGCTTCACGCTGCGTGATGACGGTGGTGATATGGCGGATGGTTTTTACCCGGTTCTTTCCTGGCTGACCTGGCCGATGTCTGTGGGTAAATGGACGCTTGAAGGGATCGAAACCCGCGCTCAGCTGCTGGATTCCGATGGTCTGCTGCGTCAGTCGTCCGATCCTTATATTATGGTGCGCGAAGCGTACTTCCAGCGTCATGATTTCATCGCTAATGGCGGCGAACTCAAACCGCAGGAAAATCCGAACGCACAAGCGATTCAGGATGATTTAAAAGATATTGATTCTGAATAA", - "dna_sequence_length": 756, - "functions": [ - "ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component" - ], - "id": "CDS_2330", - "location": [ - [ - "NC_000913", - 2465007, - "-", - 756 - ] - ], - "md5": "a0e7164d9dda45dec1575941423427c7", - "parent_gene": "", - "protein_md5": "84624b22fe8f5d1e5c6d725ee624b3fc", - "protein_translation": "MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNFNVLDPYIVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTRFFLNTILGMGGFIDVAGMANPKLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRDDGGDMADGFYPVLSWLTWPMSVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYFQRHDFIANGGELKPQENPNAQAIQDDLKDIDSE", - "protein_translation_length": 251, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944801" - ], - [ - "gene_synonym", - "NP_416849.1" - ], - [ - "gene_synonym", - "EcoGene:EG12420" - ], - [ - "gene_synonym", - "ECK2341" - ], - [ - "gene_synonym", - "GI:16130280" - ], - [ - "gene_synonym", - "ASAP:ABE-0007751" - ], - [ - "gene_synonym", - "yfdC" - ], - [ - "gene_synonym", - "JW2344" - ], - [ - "gene_synonym", - "b2347" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37327" - ] - ], - "dna_sequence": "ATGGACAACGACAAAATTGATCAACACAGCGACGAAATTGAAGTTGAGAGCGAAGAAAAAGAGCGCGGCAAAAAAATAGAAATAGATGAAGACCGACTCCCCTCCCGGGCGATGGCAATTCATGAGCATATCCGCCAGGATGGTGAAAAAGAGCTGGAACGCGACGCAATGGCGCTACTGTGGTCAGCCATTGCGGCGGGTCTGTCGATGGGCGCTTCGTTACTGGCAAAAGGGATATTTCAAGTCGAACTGGAAGGTGTGCCGGGCAGCTTCTTGCTGGAGAATCTCGGTTATACCTTTGGTTTTATTATCGTCATTATGGCCCGCCAGCAATTATTTACCGAAAATACCGTGACTGCGGTACTACCCGTCATGCAAAAACCGACAATGAGCAACGTCGGCTTACTTATACGGTTATGGGGCGTCGTGCTGCTGGGTAATATTCTCGGGACAGGTATTGCGGCGTGGGCATTTGAATATATGCCTATCTTCAATGAAGAAACTCGCGATGCATTTGTCAAAATCGGCATGGATGTGATGAAGAACACCCCCAGCGAGATGTTTGCCAACGCGATCATTTCCGGCTGGCTGATCGCCACTATGGTTTGGATGTTTCCTGCAGCGGGTGCGGCAAAGATTGTGGTGATTATATTGATGACCTGGCTTATTGCCCTGGGTGACACCACCCATATCGTGGTCGGTTCTGTTGAAATCCTCTATCTGGTGTTTAACGGTACGCTGCACTGGAGCGATTTCATCTGGCCCTTCGCACTACCTACTTTAGCGGGGAACATCTGCGGCGGCACCTTTATCTTCGCGTTAATGAGTCATGCACAGATTCGTAACGACATGAGCAATAAGCGTAAAGCAGAAGCACGCCAAAAAGCAGAACGTGCGGAAAACATTAAGAAAAATTATAAAAACCCGGCATAA", - "dna_sequence_length": 933, - "functions": [ - "putative inner membrane protein" - ], - "id": "CDS_2331", - "location": [ - [ - "NC_000913", - 2465301, - "+", - 933 - ] - ], - "md5": "1a094054759c738afab5035111388c08", - "parent_gene": "", - "protein_md5": "32abce4901f1e587388d671478608386", - "protein_translation": "MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHIRQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFQVELEGVPGSFLLENLGYTFGFIIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLIRLWGVVLLGNILGTGIAAWAFEYMPIFNEETRDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIILMTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMSHAQIRNDMSNKRKAEARQKAERAENIKKNYKNPA", - "protein_translation_length": 310, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946821" - ], - [ - "gene_synonym", - "intC" - ], - [ - "gene_synonym", - "NP_416850.1" - ], - [ - "gene_synonym", - "EcoGene:EG12413" - ], - [ - "gene_synonym", - "b2349" - ], - [ - "gene_synonym", - "ECK2343" - ], - [ - "gene_synonym", - "yfdB" - ], - [ - "gene_synonym", - "ASAP:ABE-0007756" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37326" - ], - [ - "gene_synonym", - "intS" - ], - [ - "gene_synonym", - "JW2345" - ], - [ - "gene_synonym", - "GI:16130281" - ] - ], - "dna_sequence": "ATGCTCACCGTTAAGCAGATTGAAGCAGCAAAGCCGAAAGAAAAACCATACCGCCTTCTCGATGGTAATGGCCTGTACCTTTATGTCCCTGTGTCAGGGAAAAAGGTATGGCAGCTTCGCTACAAGATTGACGGTAAGGAGAAAATCCTGACCGTCGGAAAATATCCGCTTATGACTTTGCAGGAGGCAAGGGATAAAGCATGGACTGCGAGGAAAGACATCTCGGTTGGCATCGATCCTGTAAAGGCGAAAAAGGCTTCGTCTAACAACAATTCCTTTAGTGCGATTTACAAGGAATGGTACGAGCACAAGAAGCAAGTATGGTCAGTAGGGTATGCAACTGAACTTGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGAGCCAACAAAGCACGCAGAAGATGCGGCGAGGTTTTCCGTTACGCTATTGTCACCGGAAGGGCTAAATATAACCCGGCACCTGACCTTGCTGACGCCATGAAGGGATACCGCAAGAAGAACTTCCCGTTTCTTCCTGCAGACCAGATCCCGGCATTCAACAAAGCACTGGCAACATTTTCAGGAAGTATCGTATCGCTCATTGCGACCAAAGTTTTACGCTACACAGCCCTAAGAACGAAAGAGCTTCGTTCCATGCTATGGAAGAACGTCGATTTTGAAAATAGGATTATCACCATCGACGCCAGTGTGATGAAAGGACGCAAAATTCATGTGGTTCCTATGTCAGACCAGGTAGTTGAACTTCTCACTACGCTAAGCTCCATCACCAAACCAGTCTCAGAGTTTGTTTTTGCCGGGCGCAACGATAAGAAGAAGCCAATCTGCGAGAACGCGGTACTGCTTGTGATCAAACAAATCGGCTATGAGGGTCTGGAAAGCGGTCACGGATTCAGGCATGAATTCAGCACGATTATGAACGAGCACGAATGGCCTGCTGACGCTATTGAAGTGCAACTGGCACATGCAAACGGCGGATCTGTGCGTGGGATTTACAACCATGCTCAGTATCTCGATAAACGCAGAGAAATGATGCAATGGTGGGCGGACTGGCTTGATGAGAAGGTGGAGTGA", 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- "gene_synonym", - "ASAP:ABE-0007761" - ], - [ - "gene_synonym", - "GeneID:948821" - ], - [ - "gene_synonym", - "EcoGene:EG14131" - ], - [ - "gene_synonym", - "JW2346" - ], - [ - "gene_synonym", - "gtrA" - ], - [ - "gene_synonym", - "GI:16130282" - ], - [ - "gene_synonym", - "b2350" - ] - ], - "dna_sequence": "ATGTTAAAGCTATTTGCAAAGTACACCTCTATTGGTGTGCTGAACACCCTTATACACTGGGTGGTTTTTGGTGTTTGTATCTATGTCGCGCATACAAACCAAGCTCTTGCAAACTTCGCAGGTTTCGTTGTGGCTGTGAGCTTTAGCTTCTTCGCGAATGCAAAATTCACATTCAAGGCATCGACTACAACGATGCGCTACATGCTATATGTTGGGTTCATGGGGACACTGAGTGCTACTGTTGGATGGGCTGCTGATAGATGCGCACTTCCCCCGATGATAACTCTTGTCACCTTCTCCGCCATCAGCCTGGTGTGCGGTTTCGTCTATTCAAAGTTCATTGTCTTTAGGGATGCGAAATGA", - "dna_sequence_length": 363, - "functions": [ - "CPS-53 (KpLE1) prophage", - "bactoprenol-linked glucose translocase/flippase" - ], - "id": "CDS_2333", - "location": [ - [ - "NC_000913", - 2467855, - "+", - 363 - ] - ], - "md5": "77a20db55f393f8d8c1e901dd8522d76", - "parent_gene": "", - "protein_md5": "028d8e1ba9ca674984b356043d6fd9a8", - "protein_translation": "MLKLFAKYTSIGVLNTLIHWVVFGVCIYVAHTNQALANFAGFVVAVSFSFFANAKFTFKASTTTMRYMLYVGFMGTLSATVGWAADRCALPPMITLVTFSAISLVCGFVYSKFIVFRDAK", - "protein_translation_length": 120, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77293" - ], - [ - "gene_synonym", - "yfdH" - ], - [ - "gene_synonym", - "ECK2345" - ], - [ - "gene_synonym", - "GI:16130283" - ], - [ - "gene_synonym", - "ASAP:ABE-0007763" - ], - [ - "gene_synonym", - "EcoGene:EG14132" - ], - [ - "gene_synonym", - "GeneID:949098" - ], - [ - "gene_synonym", - "gtrB" - ], - [ - "gene_synonym", - "NP_416852.1" - ], - [ - "gene_synonym", - "b2351" - ], - [ - "gene_synonym", - "JW2347" - ] - ], - "dna_sequence": "ATGAAGATATCTCTTGTAGTTCCTGTCTTCAATGAAGAAGAAGCGATACCAATTTTTTATAAAACGGTACGTGAATTCGAAGAATTGAAGTCATATGAAGTGGAAATCGTTTTCATAAATGACGGCAGCAAAGACGCTACGGAGTCAATCATTAATGCTCTGGCTGTTTCAGATCCTCTAGTTGTTCCGCTGTCATTTACACGCAACTTTGGTAAAGAACCAGCATTGTTTGCAGGGTTAGACCATGCAACCGGGGATGCGATAATCCCAATTGATGTTGACCTGCAAGACCCGATTGAGGTTATTCCTCATCTTATTGAAAAATGGCAAGCAGGTGCTGATATGGTTCTTGCTAAAAGATCTGACCGCTCAACTGATGGACGCCTGAAGCGAAAAACGGCTGAGTGGTTCTATAAGCTCCACAATAAAATAAGCAATCCTAAAATTGAAGAGAATGTTGGTGATTTCAGGCTGATGAGCCGTGATGTTGTCGAAAATATTAAACTTATGCCAGAACGAAACCTTTTCATGAAAGGTATTCTGAGCTGGGTAGGAGGAAAGACAGATATTGTTGAATACGTGCGAGCGGAAAGAATTGCTGGAGATACAAAATTTAATGGATGGAAACTTTGGAATTTAGCACTTGAGGGTATTACAAGCTTTTCCACATTCCCTCTTCGCATCTGGACATACATAGGGTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTGTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGA", - "dna_sequence_length": 921, - "functions": [ - "CPS-53 (KpLE1) prophage", - "bactoprenol glucosyl transferase" - ], - "id": "CDS_2334", - "location": [ - [ - "NC_000913", - 2468214, - "+", - 921 - ] - ], - "md5": "839fcad2e933c87d2e648b0e547b8d16", - "parent_gene": "", - "protein_md5": "1134ac1cc16539c0d6579954e5210902", - "protein_translation": "MKISLVVPVFNEEEAIPIFYKTVREFEELKSYEVEIVFINDGSKDATESIINALAVSDPLVVPLSFTRNFGKEPALFAGLDHATGDAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDGRLKRKTAEWFYKLHNKISNPKIEENVGDFRLMSRDVVENIKLMPERNLFMKGILSWVGGKTDIVEYVRAERIAGDTKFNGWKLWNLALEGITSFSTFPLRIWTYIGLVVASVAFIYGAWMILDTIIFGNAVRGYPSLLVSILFLGGIQMIGIGVLGEYIGRTYIETKKRPKYIIKRVKK", - "protein_translation_length": 306, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946822" - ], - [ - "gene_synonym", - "yfdI" - ], - [ - "gene_synonym", - "ASAP:ABE-0007765" - ], - [ - "gene_synonym", - "GI:16130284" - ], - [ - "gene_synonym", - "ECK2346" - ], - [ - "gene_synonym", - "JW5382" - ], - [ - "gene_synonym", - "EcoGene:EG14133" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76507" - ], - [ - "gene_synonym", - "gtrS" - ], - [ - "gene_synonym", - "gtrIV" - ], - [ - "gene_synonym", - "NP_416853.1" - ], - [ - "gene_synonym", - "b2352" - ] - ], - "dna_sequence": "ATGAATAAAGCAATAAAAGTATCATTGTATATATCTTTTGTTTTGATTATTTGCGCCTTATCTAAAAACATAATGATGTTAAATACATCTGATTTCGGAAGAGCCATTAAGCCATTAATTGAAGACATACCAGCATTTACATATGACTTACCTTTATTGTATAAATTGAAAGGTCATATTGATTCAATTGATAGCTATGAGTATATAAGTTCATATAGTTATATTTTGTATACATACGTCCTGTTTATTAGCATTTTTACTGAATATCTTGATGCTAGGGTGTTATCGTTATTTCTAAAAGTAATATATATTTATTCATTATATGCGATATTTACTTCATATATAAAAACAGAAAGGTATGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACTCTTTTTATTGGTTAGCAAACCAAGCACCATCTTCAAACTTCCATTTGATGATGGTGTGATGTCTCAGTATAAAGAAAATTATTTCCATGTATATAAAAAACTACACGTAATATATGGAGAATCAAACATACTAACGACTATTACTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAAATAAAGGCATCTTTATTTGTAGTATCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAA", 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"gene_synonym", - "GeneID:946825" - ], - [ - "gene_synonym", - "yfdJ" - ], - [ - "gene_synonym", - "ECK2347" - ], - [ - "gene_synonym", - "JW5383" - ], - [ - "gene_synonym", - "EcoGene:EG14134" - ], - [ - "gene_synonym", - "tfaS" - ], - [ - "gene_synonym", - "b2353" - ] - ], - "dna_sequence": "ACTATCGCCCCATTAACGCCATACGATAAATGGGATGGTGAGAAATGGGTGACGGATACCGAGGCACAGCATAGCGTCGCAGTAGATGCAGCAGAAGCACAGCGCCAGTCGCTGATTGATACTGCAATGGCTTCCATTAGTCTGATTCAACTGAAATTACAGGCTGGGCGGAAGCTGATGCAGGCAGAGACCTCCCGACTTAACACTGTGCTGGATTACATTGACGCGGTGACGGCAACAGATACCAGCACCGCGCCGGATGTCATCTGGCCTGAACTGCCGGAGGAGTAG", - "dna_sequence_length": 291, - "id": "CDS_2336", - "location": [ - [ - "NC_000913", - 2470815, - "+", - 291 - ] - ], - "md5": "7372f2e6a6eb1059fc799919a493fa43", - "parent_gene": "", - "protein_md5": "2ad59d5977da20f8d929719311434859", - "protein_translation": "TIAPLTPYDKWDGEKWVTDTEAQHSVAVDAAEAQRQSLIDTAMASISLIQLKLQAGRKLMQAETSRLNTVLDYIDAVTATDTSTAPDVIWPELPEE", - "protein_translation_length": 96, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416855.1" - ], - [ - "gene_synonym", - "ECK2348" - ], - [ - "gene_synonym", - "yfdK" - ], - [ - "gene_synonym", - "GI:16130286" - ], - [ - "gene_synonym", - "GeneID:948822" - ], - [ - "gene_synonym", - "ASAP:ABE-0007770" - ], - [ - "gene_synonym", - "JW2350" - ], - [ - "gene_synonym", - "EcoGene:EG14135" - ], - [ - "gene_synonym", - "b2354" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77656" - ] - ], - "dna_sequence": "ATGAATTACATATATTCCGCGACTACAAACTCTTTCTATCCCTTGGAGATGAAAGAGGATTACACGCAAGCTGGCTCATGGCCAGATGATGCTGTTGAAGTTGATGAGCAAGTGTATATTGAGTTTTCCGGATTACCGCCGAAAGGAAAAATCCGTATCGCTGGAGAAAATGGTTTTCCTGCATGGTCTGAAATTCCACCACCAACACATGAGGAACAGATTGCTGCAGCCGAACTGAAAAAGCAGCAATTGATTAATCAGGCCAACGATTATATGAACAGTAAACAATGGGCTGGTAAAGCGGCTATTGGTCGTCTGAAAGGTGAGGAACTGGCGCAATATAATTTGTGGCTGGATTATCTGGACGCACTGGAGCTGGTCGATACTTCCAGTGCGCCAGATATTGAATGGCCTACTCCTCCGGCAGTTCAGGCCAGATGA", - "dna_sequence_length": 441, - "functions": [ - "CPS-53 (KpLE1) prophage", - "conserved protein" - ], - "id": "CDS_2337", - "location": [ - [ - "NC_000913", - 2471517, - "-", - 441 - ] - ], - "md5": "00eb0bc7b41a96cc9b64007a4817f0a4", - "parent_gene": "", - "protein_md5": "1301bd4e095d04cd5ba9e554ee5cd96a", - "protein_translation": "MNYIYSATTNSFYPLEMKEDYTQAGSWPDDAVEVDEQVYIEFSGLPPKGKIRIAGENGFPAWSEIPPPTHEEQIAAAELKKQQLINQANDYMNSKQWAGKAAIGRLKGEELAQYNLWLDYLDALELVDTSSAPDIEWPTPPAVQAR", - "protein_translation_length": 146, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfdL" - ], - [ - "gene_synonym", - "ECK2349" - ], - [ - "gene_synonym", - "JW5384" - ], - [ - "gene_synonym", - "ASAP:ABE-0007773" - ], - [ - "gene_synonym", - "GeneID:949099" - ], - [ - "gene_synonym", - "EcoGene:EG14136" - ], - [ - "gene_synonym", - "b2355" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76508" - ] - ], - "dna_sequence": "ACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAGCTTTGCAGCGTTGTGGAGGCCTCCGGTGCCAGCCTGGAGAAGGGGCGGCATGACCAGCTGCTTACCGCGCTTCGTGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATTGGACGGCACGGTGCAAAAGGCTCTCGAAAACCTTGGTTTGGGAGAAGCGGCTAAAAGAAATGTAGGGACAGGGGCGAATCAGATACCTGATATGGGTAGTTTTATGCTTTCTGCTTCAGTTCCTGGATATCAAAAATTGCCATCCGGTTTAATTATTCAATGGGGGCCAATTGATGTTCCGCTGACGTCTCAGGACACAGTAACCTATTTTCCGATTGCATTTCCGAATAGATGTCTGCGGGTATTTGCGACTCAGGATTACACTCCCGGCAGTGCAAATGTTGGCTATATAGCTTGTGCCGGTTATAACCAGGACCCGGTGAAATTTATTTCCAGAGCAGGCGTACCCGGTATCGGTGCTTCATTTTTCGCATTAGGGTGTTAA", - "dna_sequence_length": 579, - "id": "CDS_2338", - "location": [ - [ - "NC_000913", - 2472122, - "-", - 579 - ] - ], - "md5": "d866f8cefd1eb1e13703c51c0bbd47ad", - "parent_gene": "", - "protein_md5": "0e1babf6f2a36c35fc0c4cc94943480d", - "protein_translation": "TRGNPQTGTPATDLDDDYFDMLQEELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKLDGTVQKALENLGLGEAAKRNVGTGANQIPDMGSFMLSASVPGYQKLPSGLIIQWGPIDVPLTSQDTVTYFPIAFPNRCLRVFATQDYTPGSANVGYIACAGYNQDPVKFISRAGVPGIGASFFALGC", - "protein_translation_length": 192, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfdM" - ], - [ - "gene_synonym", - "ECK2350" - ], - [ - "gene_synonym", - "EcoGene:EG12950" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76509" - ], - [ - "gene_synonym", - "JW2352" - ], - [ - "gene_synonym", - "yzyB" - ], - [ - "gene_synonym", - "b2356" - ], - [ - "gene_synonym", - "GeneID:945416" - ], - [ - "gene_synonym", - "ASAP:ABE-0007775" - ] - ], - "dna_sequence": "ATGAGTAATAAATATTGCCAGGCGCTGGTGGAGCTGCGGAACAAACCAGCCCATGAACTGAAGGAAGTGGGCGATCAGTGGCGCACGCCGGACAACATTTTCTGGGGAATTAACACCCTGTTTGGCCCGTTTGTTCTGGATCTGTTTACTGATGGTGATAACGCCAAATGTGCCGCGTATTACACTGCGGAAGACAACGCGCTGGCGCATGACTGGTCAGAACGTCTTGCGGAGCTTAAAGGTGCTGCCTTTGGTAATCCCCCGTACCCG", - "dna_sequence_length": 270, - "id": "CDS_2339", - "location": [ - [ - "NC_000913", - 2472387, - "-", - 270 - ] - ], - "md5": "02f38c1e11efd6cfbd597793be917f15", - "parent_gene": "", - "protein_md5": "0c2aedd6ad68c7b872e11cd6df9ed13e", - "protein_translation": "MSNKYCQALVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGDNAKCAAYYTAEDNALAHDWSERLAELKGAAFGNPPYP", - "protein_translation_length": 90, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfdN" - ], - [ - "gene_synonym", - "EcoGene:EG12949" - ], - [ - "gene_synonym", - "GI:16130289" - ], - [ - "gene_synonym", - "ASAP:ABE-0007777" - ], - [ - "gene_synonym", - "JW5385" - ], - [ - "gene_synonym", - "ECK2351" - ], - [ - "gene_synonym", - "NP_416858.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76510" - ], - [ - "gene_synonym", - "b2357" - ], - [ - "gene_synonym", - "yzyA" - ], - [ - "gene_synonym", - "GeneID:946419" - ] - ], - "dna_sequence": "GTGAGCATGAGTCTTTTGAATGACGTTCAGAAATTCATTGAAGCCCATCCGGGCTGTACTTCCGGAGACATTGCGGATGCTTTTGCAGGTTACTCACGGCAGCGCGTTCTGCAGTCAGCAAGCAAGTTACGTCAGAGTGGGCGTGTGGCTCACCGTTGTGAAGGAGATACACACAGACATTTCCCGCGCCTGACTGAGAGAGCGCAGGATCCGGAACCACAACCAGTTCGTGAAACCAGACCTGTGCGCAATTTCTATGTCGGCACTAACGACCCGCGGGTGATTTTGTGCCTGACCCGCCAGGCGGAAGAACTGGAGTCCAGGGGCTTATACCGTCGTGCTGCAACGGTGTGGATGGCGGCATTCCGTGAAAGCCACTCCCAGCCAGAACGAAACAATTTTCTGGCGCGTCGTGAACGGTGTTTACGGAAAAGCAGTAAGCGGGCTGCATCAGGTGAAGAGTGGTATCTCTCAGGGAATTACGTGGGGGCTTAA", - "dna_sequence_length": 495, - "functions": [ - "CPS-53 (KpLE1) prophage", - "uncharacterized protein" - ], - "id": "CDS_2340", - "location": [ - [ - "NC_000913", - 2472881, - "-", - 495 - ] - ], - "md5": "e99319d0ca95562d1c6c9a4968d3d6e3", - "parent_gene": "", - "protein_md5": "19378ad73f9628d008db9f20fd6fe44a", - "protein_translation": "MSMSLLNDVQKFIEAHPGCTSGDIADAFAGYSRQRVLQSASKLRQSGRVAHRCEGDTHRHFPRLTERAQDPEPQPVRETRPVRNFYVGTNDPRVILCLTRQAEELESRGLYRRAATVWMAAFRESHSQPERNNFLARRERCLRKSSKRAASGEEWYLSGNYVGA", - "protein_translation_length": 164, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfdO" - ], - [ - "gene_synonym", - "ASAP:ABE-0007779" - ], - [ - "gene_synonym", - "ECK2352" - ], - [ - "gene_synonym", - "GeneID:947403" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD35" - ], - [ - "gene_synonym", - "JW2355" - ], - [ - "gene_synonym", - "b2358" - ], - [ - "gene_synonym", - "oweS" - ], - [ - "gene_synonym", - "EcoGene:EG14137" - ] - ], - "dna_sequence": "AACCGCAATGCGTCGAATGTTTATCAGCTTAACGTTGCGAAGCTTCAGGCAGCGGCATTTTCTCAACTGTCAGACTCTGACCCGTCAAAATCTGACGCATCAAAATCTGACCCGTCAAAATTTGATGCGTCGAAATCTGGCAAAAAATCGGGTTTTCACCCGTCAGAATCTGGCGGGGATCCGTCAGTAAAATCAAAACATGATCCGTCAGATAAAAAACCTTCTCGTCCGGACGCTTCGCAACCGGACACGCAGACGGATGAACAGGATTTTTTAACTCGCCATCCTGATGCGGTTGTATTCAGCCCTAAAAAGCGCCAGTGGGGAACGCAGGATGATTTGACCTGCGCACAGTGGCTCTGGAAAAAAATCATCGCCCTGTACGAGCAGGCCGCCGAATGTGACGGCGAGGTGGTTCGTCCCAAAGAACCGAACTGGACAGCCTGGGCAAACGAAATTCGCCTGATGTGTGTGCAGGATGGTCGTACTCACAAACAAATCTGCGAGATGTACAGCCGCGTCAGCCGCGATCCGTTCTGGTGCCGTAACGTGCTCAGCCCGTCGAAGCTGCGGGAAAAATGGGATGAGCTTTCCCTGCGCTTATCGCCGTCCGTCAGCACGTACACAGAAAAACGCGAAGACCCGTACTTCAAAGCCAGTTACGACAATGTGGACTACAGCCAGATCCCGGCAGGATTCAGGGGGTGA", - "dna_sequence_length": 708, - "id": "CDS_2341", - "location": [ - [ - "NC_000913", - 2473585, - "-", - 708 - ] - ], - "md5": "b467620d46db71638889e6c911114737", - "parent_gene": "", - "protein_md5": "33083c6d139a183102f1b0f1857bccc5", - "protein_translation": "NRNASNVYQLNVAKLQAAAFSQLSDSDPSKSDASKSDPSKFDASKSGKKSGFHPSESGGDPSVKSKHDPSDKKPSRPDASQPDTQTDEQDFLTRHPDAVVFSPKKRQWGTQDDLTCAQWLWKKIIALYEQAAECDGEVVRPKEPNWTAWANEIRLMCVQDGRTHKQICEMYSRVSRDPFWCRNVLSPSKLREKWDELSLRLSPSVSTYTEKREDPYFKASYDNVDYSQIPAGFRG", - "protein_translation_length": 235, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416860.4" - ], - [ - "gene_synonym", - "ECK2353" - ], - [ - "gene_synonym", - "GeneID:945565" - ], - [ - "gene_synonym", - "b2359" - ], - [ - "gene_synonym", - "JW2356" - ], - [ - "gene_synonym", - "EcoGene:EG14138" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76512" - ], - [ - "gene_synonym", - "ASAP:ABE-0007785" - ], - [ - "gene_synonym", - "yfdP" - ], - [ - "gene_synonym", - "GI:145698293" - ] - ], - "dna_sequence": "ATGGCTAGCGAACGCAGTACTGATGTGCAGGCATTTATCGGGGAGCTGGACGGCGGCGTATTTGAAACCAAAATCGGCGCAGTTCTCAGTGAAGTCGCTTCCGGTGTGATGAACACGAAAACCAAAGGTAAGGTCTCACTCAACCTGGAAATCGAACCATTTGATGAGAACCGTCTGAAAATCAAACACAAACTCTCATATGTTCGCCCGACTAACCGTGGGAAAATTTCCGAAGAAGACACCACCGAAACGCCGATGTATGTCAATCGCGGTGGTCGCCTGACTATTCTGCAGGAAGACCAGGGACAATTACTGACTCTTGCCGGTGAGCCTGACGGAAAACTCCGCGCAGCAGGTCATTAA", - "dna_sequence_length": 363, - "functions": [ - "CPS-53 (KpLE1) prophage", - "uncharacterized protein" - ], - "id": "CDS_2342", - "location": [ - [ - "NC_000913", - 2473604, - "+", - 363 - ] - ], - "md5": "27b8ff85358510ad4d551d5928d98dbb", - "parent_gene": "", - "protein_md5": "04132d0772c658e8f8e2d17d9a91afd5", - "protein_translation": "MASERSTDVQAFIGELDGGVFETKIGAVLSEVASGVMNTKTKGKVSLNLEIEPFDENRLKIKHKLSYVRPTNRGKISEEDTTETPMYVNRGGRLTILQEDQGQLLTLAGEPDGKLRAAGH", - "protein_translation_length": 120, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416861.1" - ], - [ - "gene_synonym", - "b2360" - ], - [ - "gene_synonym", - "ASAP:ABE-0007788" - ], - [ - "gene_synonym", - "GeneID:946827" - ], - [ - "gene_synonym", - "GI:16130292" - ], - [ - "gene_synonym", - "ECK2354" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76513" - ], - [ - "gene_synonym", - "JW2357" - ], - [ - "gene_synonym", - "EcoGene:EG14139" - ], - [ - "gene_synonym", - "yfdQ" - ] - ], - "dna_sequence": "ATGTCTCAGAACTTAGACGCAACCGCAATTAATCAAATCCATGCCCTTATTTCTGCTCAGGGTGTTAATGAAATTATCAGTAAGATTGGTGCCGATGCTGTGGCATTGCCTGAGAATTTCCGCATTCATGATCTGGAAAAATTTAATTTAAATCGCTTCCGTTTCCGTGGTGCGCTTTCCACTGCCAGCATCGATGACTTTACCCGTTATTCTAAAGATCTTGCAGATGAAGGCACCCGCTGCTTTATCGATGCTGATAATATGCGTGCCGTCAGTGTGCTTAACCTGGGTACTATTGATGAACCAGGTCACGCAGATAACACCGCCACTCTCAAACTGAAAAAGACAGCACCGTTCTCTGCCCTGTTGTCTGTTAACGGCGAGCGTAACTCCCAGAAATCACTGGCAGAATGGATTGAAGACTGGGCCGACTACCTTGTGGGCTTTGATGCTAATGGTGACGCCATTCAGGCAACAAAAGCGGCTGCGGCAATCCGTAAAATCACGATTGAAGCAAACCAGACCGCTGATTTTGAAGATAATGACTTCAGCGGCAAACGCTCCCTGATGGAATCTGTCGAAGCGAAGACCAAAGACATTATGCCAGTGGCATTTGAATTTAAATGCGTTCCGTTTGAAGGTCTGAAAGAACGTCCGTTTAAATTACGCCTCAGCATTATCACTGGCGATCGTCCTGTACTGGTTCTGCGCATTATTCAGCTGGAAGCGGTGCAGGAAGATATGGCTAACGAATTTCGTGATCTGCTTGTTGAGAAATTCAAAGACAGCAAAGTAGAAACCTTTATTGGTACTTTCACCGCCTGA", - "dna_sequence_length": 825, - "functions": [ - "CPS-53 (KpLE1) prophage", - "uncharacterized protein" - ], - "id": "CDS_2343", - "location": [ - [ - "NC_000913", - 2474032, - "+", - 825 - ] - ], - "md5": "52b58e5a5896641d77e13ba3df28bd31", - "parent_gene": "", - "protein_md5": "a41eca9b6dcfefaa8d919d9e4b724d92", - "protein_translation": "MSQNLDATAINQIHALISAQGVNEIISKIGADAVALPENFRIHDLEKFNLNRFRFRGALSTASIDDFTRYSKDLADEGTRCFIDADNMRAVSVLNLGTIDEPGHADNTATLKLKKTAPFSALLSVNGERNSQKSLAEWIEDWADYLVGFDANGDAIQATKAAAAIRKITIEANQTADFEDNDFSGKRSLMESVEAKTKDIMPVAFEFKCVPFEGLKERPFKLRLSIITGDRPVLVLRIIQLEAVQEDMANEFRDLLVEKFKDSKVETFIGTFTA", - "protein_translation_length": 274, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007791" - ], - [ - "gene_synonym", - "GeneID:946834" - ], - [ - "gene_synonym", - "b2361" - ], - [ - "gene_synonym", - "GI:90111424" - ], - [ - "gene_synonym", - "ECK2355" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76514" - ], - [ - "gene_synonym", - "NP_416862.2" - ], - [ - "gene_synonym", - "EcoGene:EG14140" - ], - [ - "gene_synonym", - "JW2358" - ], - [ - "gene_synonym", - "yfdR" - ] - ], - "dna_sequence": "ATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGTCATCTTTCTCACTTCTACAGTGTCGCCCAACATGCGGTGCTTTGCAGCCAGCTGGTGCCGCAGGAATTTGCTTTTGAAGCATTAATGCATGATGCAACAGAAGCGTATTGCCAGGACATCCCCGCACCACTGAAACGCCTTCTTCCTGACTATAAACGGATGGAAGAAAAAATAGATGCAGTAATCCGTGAGAAATACGGGTTACCTCCTGTTATGAGCACGCCAGTGAAATATGCCGATCTCATTATGCTGGCAACCGAACGCCGTGATCTCGGGCTTGATGATGGCTCTTTCTGGCCTGTACTGGAAGGCATCCCGGCAACAGAGATGTTCAACGTGATTCCACTGGCACCGGGTCATGCCTACGGGATGTTTATGGAACGTTTTAACGATTTATCGGAGTTACGCAAATGCGCATGA", - "dna_sequence_length": 537, - "functions": [ - "CPS-53 (KpLE1) prophage", - "conserved protein" - ], - "id": "CDS_2344", - "location": [ - [ - "NC_000913", - 2474984, - "+", - 537 - ] - ], - "md5": "b1b30bd71a6f94f7f1f77b8e5ea9cfd7", - "parent_gene": "", - "protein_md5": "124b3f099262412cd0d662136fff7562", - "protein_translation": "MSFIKTFSGKHFYYDKINKDDIVINDIAVSLSNICRFAGHLSHFYSVAQHAVLCSQLVPQEFAFEALMHDATEAYCQDIPAPLKRLLPDYKRMEEKIDAVIREKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPVLEGIPATEMFNVIPLAPGHAYGMFMERFNDLSELRKCA", - "protein_translation_length": 178, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007793" - ], - [ - "gene_synonym", - "b2362" - ], - [ - "gene_synonym", - "GeneID:946426" - ], - [ - "gene_synonym", - "ECK2356" - ], - [ - "gene_synonym", - "GI:16130294" - ], - [ - "gene_synonym", - "EcoGene:EG14141" - ], - [ - "gene_synonym", - "NP_416863.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76515" - ], - [ - "gene_synonym", - "JW2359" - ], - [ - "gene_synonym", - "yfdS" - ] - ], - "dna_sequence": "ATGCGCATGAATGTTTTCGAAATGGAAGGGTTTCTTCGCGGGAAATGTGTACCGCGAGATCTGAAAGTGAACGAAACAAATGCTGAGTACCTGGTACGTAAATTCGACGCGCTTGAAGCTAAATGTGCGGCACTGGAAAACAAAATAATACCAGTGTCAGCTGAACTGCCACCAGCAAATGAAAGTGTTCTGTTATTTGATGCTAACGGAGAAGGCTGGCTGATTGGCTGGCGTTCTCTCTGGTACACCTGGGGACAAAAAGAAACCGGAGAATGGCAGTGGACATTTCAGGTTGGGGACCTTGAAAACGTCAATATCACTCACTGGGCAGTAATGCCAAAAGCACCGGAGGCTGGAGCATAA", - "dna_sequence_length": 363, - "functions": [ - "CPS-53 (KpLE1) prophage", - "uncharacterized protein" - ], - "id": "CDS_2345", - "location": [ - [ - "NC_000913", - 2475511, - "+", - 363 - ] - ], - "md5": "cdd754917eb5c3a405409e225104f698", - "parent_gene": "", - "protein_md5": "44b3a5e353bf833b858ab75613aba0a5", - "protein_translation": "MRMNVFEMEGFLRGKCVPRDLKVNETNAEYLVRKFDALEAKCAALENKIIPVSAELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGEWQWTFQVGDLENVNITHWAVMPKAPEAGA", - "protein_translation_length": 120, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946836" - ], - [ - "gene_synonym", - "EcoGene:EG14142" - ], 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"protein_translation": "MTTFTNKELIKEIKERISSLEVRDDIERRAYEIALVSLEVEPDEREAYELFMEKRFGDLVDRRRAKNGDNEYMAWDMTLGWIIWQQRAGIHFSTMSQQEVK", - "protein_translation_length": 101, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0285066" - ], - [ - "gene_synonym", - "ECK2358" - ], - [ - "gene_synonym", - "b4545" - ], - [ - "gene_synonym", - "JW5386" - ], - [ - "gene_synonym", - "ypdJ" - ], - [ - "gene_synonym", - "EcoGene:EG14428" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q2EET0" - ], - [ - "gene_synonym", - "GeneID:1450283" - ] - ], - "dna_sequence": "GAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATATCC", - "dna_sequence_length": 51, - "id": "CDS_2347", - "location": [ - [ - "NC_000913", - 2476181, - "+", - 51 - ] - ], - "md5": "58d04b91b0aa1f1385a4952ed5be061d", - "parent_gene": "", - "protein_md5": "153ef2e292b99b5727b65e18766161a4", - "protein_translation": "EPYSLTLDEACQFLKIS", - "protein_translation_length": 17, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:1450232" - ], - [ - "gene_synonym", - "EcoGene:EG14411" - ], - [ - "gene_synonym", - "ECK2359" - ], - [ - "gene_synonym", - "JW5387" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q2EES9" - ], - [ - "gene_synonym", - "torI" - ], - [ - "gene_synonym", - "GI:94541120" - ], - [ - "gene_synonym", - "ASAP:ABE-0269710" - ], - [ - "gene_synonym", - "YP_588463.1" - ], - [ - "gene_synonym", - "b4501" - ] - ], - "dna_sequence": "ATGCAACACGAACTACAGCCTGATTCACTGGTTGATTTGAAATTCATCATGGCTGATACTGGCTTTGGTAAAACCTTCATCTATGACCGGATTAAGTCAGGCGACCTGCCAAAAGCCAAAGTTATCCACGGGCGAGCAAGATGGTTATATCGTGACCATTGTGAATTCAAAAATAAGCTCTTAAGCCGCGCCAATGGGTAA", - "dna_sequence_length": 201, - "functions": [ - "response regulator inhibitor for tor operon" - ], - "id": "CDS_2348", - "location": [ - [ - "NC_000913", - 2476310, - "+", - 201 - ] - ], - "md5": "16caedcafd137dd7876431c31aed9223", - "parent_gene": "", - "protein_md5": "2515a76b9b2164d8c7aa15c84dca96d5", - "protein_translation": "MQHELQPDSLVDLKFIMADTGFGKTFIYDRIKSGDLPKAKVIHGRARWLYRDHCEFKNKLLSRANG", - "protein_translation_length": 66, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2364" - ], - [ - "gene_synonym", - "ECK2360" - ], - [ - "gene_synonym", - "NP_416865.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007797" - ], - [ - "gene_synonym", - "dsdC" - ], - [ - "gene_synonym", - "GI:16130296" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46068" - ], - [ - "gene_synonym", - "EcoGene:EG13161" - ], - [ - "gene_synonym", - "GeneID:948828" - ], - [ - "gene_synonym", - "JW2361" - ] - ], - "dna_sequence": "ATGGAACCCCTTCGTGAAATAAGAAATCGGCTGCTTAACGGCTGGCAATTATCAAAAATGCATACTTTTGAAGTGGCTGCCAGGCATCAGTCCTTCGCCCTGGCGGCAGAGGAATTGTCGCTGAGCCCCAGTGCGGTAAGTCACCGTATCAATCAGCTGGAAGAAGAATTGGGCATTCAGTTGTTTGTTCGTTCCCATCGCAAAGTGGAATTAACGCACGAGGGGAAACGTGTTTATTGGGCGCTAAAATCGTCGCTGGATACCCTGAACCAGGAAATTCTTGATATCAAAAATCAGGAGTTATCGGGAACGTTAACTCTGTATTCCCGGCCCTCTATCGCCCAATGCTGGTTGGTGCCCGCATTAGGTGACTTTACACGCCGGTATCCGTCTATTTCGCTCACCGTGCTCACTGGTAATGACAACGTCAATCTGCAACGTGCCGGAATCGATTTGGCGATCTACTTTGATGATGCGCCGTCAGCGCAACTCACTCATCACTTTCTGATGGATGAAGAAATCCTGCCAGTATGTAGCCCGGAATACGCTCAAAGACATGCTTTAACCAACACGGTAATTAACCTGTGTCACTGTACGTTGCTCCATGACAGACAGGCATGGAGCAACGACTCCGGTACGGATGAATGGCATAGTTGGGCGCAACATTATGCGGTTAATTTGCCGACATCTTCTGGAATTGGCTTTGATCGTTCTGATTTAGCTGTTATTGCCGCGATGAATCATATTGGGGTGGCGATGGGAAGAAAACGCCTGGTACAAAAAAGGCTTGCCAGTGGTGAGCTCGTCGCGCCGTTTGGCGATATGACGGTGAAATGCCATCAGCATTATTACATCACCACATTACCGGGCAGGCAGTGGCCAAAAATTGAAGCGTTTATTATCTGGCTAAGAGAACAGGTAAAAACCACTTCATAA", - "dna_sequence_length": 936, - "functions": [ - "dsd operon activator", - "autorepressor" - ], - "id": "CDS_2349", - "location": [ - [ - "NC_000913", - 2477629, - "-", - 936 - ] - ], - "md5": "febf1ace450f95e39c4f6f11af3edcd6", - "parent_gene": "", - "protein_md5": "c38fa069b5c0c42353215cd2ad1e7c5d", - "protein_translation": "MEPLREIRNRLLNGWQLSKMHTFEVAARHQSFALAAEELSLSPSAVSHRINQLEEELGIQLFVRSHRKVELTHEGKRVYWALKSSLDTLNQEILDIKNQELSGTLTLYSRPSIAQCWLVPALGDFTRRYPSISLTVLTGNDNVNLQRAGIDLAIYFDDAPSAQLTHHFLMDEEILPVCSPEYAQRHALTNTVINLCHCTLLHDRQAWSNDSGTDEWHSWAQHYAVNLPTSSGIGFDRSDLAVIAAMNHIGVAMGRKRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGRQWPKIEAFIIWLREQVKTTS", - "protein_translation_length": 311, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007801" - ], - [ - "gene_synonym", - "b2365" - ], - [ - "gene_synonym", - "ECK2361" - ], - [ - "gene_synonym", - "yfdA" - ], - [ - "gene_synonym", - "NP_416866.1" - ], - [ - "gene_synonym", - "dsdC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08555" - ], - [ - "gene_synonym", - "GI:16130297" - ], - [ - "gene_synonym", - "GeneID:949103" - ], - [ - "gene_synonym", - "yfdD" - ], - [ - "gene_synonym", - "dsdX" - ], - [ - "gene_synonym", - "EcoGene:EG10250" - ], - [ - "gene_synonym", - "JW2362" - ] - ], - "dna_sequence": "ATGCACTCTCAAATCTGGGTTGTGAGCACGCTGCTTATCAGCATCGTGTTAATTGTACTGACCATCGTGAAGTTCAAATTCCACCCGTTTCTGGCGCTGTTGCTGGCCAGCTTCTTCGTGGGAACGATGATGGGCATGGGGCCACTGGATATGGTAAATGCTATTGAAAGTGGAATTGGCGGAACGCTGGGGTTCCTCGCAGCGGTTATCGGCCTTGGCACGATACTGGGAAAAATGATGGAAGTATCCGGGGCCGCAGAAAGAATTGGTCTGACACTTCAACGCTGCCGCTGGCTTTCAGTTGATGTCATTATGGTGCTGGTTGGCCTGATTTGTGGCATCACGCTGTTTGTTGAAGTGGGCGTCGTGCTATTGATTCCTCTGGCTTTTTCAATTGCCAAAAAAACCAATACCTCATTATTAAAGCTTGCCATTCCGCTATGTACCGCATTGATGGCAGTGCACTGCGTGGTTCCTCCACATCCGGCTGCTTTATATGTTGCCAATAAGCTGGGCGCAGATATCGGTTCGGTGATCGTCTACGGTTTGCTGGTTGGGCTGATGGCATCACTGATCGGTGGCCCACTTTTCCTTAAATTTCTGGGTCAACGACTGCCCTTTAAACCTGTACCCACAGAGTTTGCAGATCTCAAAGTTCGCGATGAAAAAACACTACCGTCATTAGGCGCAACGTTATTCACCATACTGCTACCCATTGCGCTGATGTTGGTTAAAACGATTGCCGAATTGAATATGGCGCGTGAGAGTGGTTTGTATATCTTGGTTGAGTTTATTGGCAACCCTATCACTGCCATGTTTATCGCCGTGTTTGTCGCCTATTATGTGTTGGGTATACGCCAGCATATGAGCATGGGGACGATGCTCACACATACGGAAAATGGCTTCGGTTCTATTGCTAATATTTTGCTGATTATCGGGGCCGGAGGCGCATTCAACGCCATTTTAAAAAGCAGCAGTCTCGCTGATACGCTGGCAGTTATTCTCTCCAATATGCATATGCACCCGATTCTTCTGGCCTGGTTAGTGGCTCTTATTCTGCATGCGGCAGTGGGCTCCGCTACCGTGGCAATGATGGGGGCAACGGCAATTGTTGCACCCATGCTGCCGCTGTATCCCGACATCAGCCCGGAAATTATTGCGATTGCTATCGGTTCAGGTGCAATTGGCTGCACTATCGTTACGGACTCGCTTTTCTGGCTAGTGAAGCAATATTGCGGCGCTACGCTCAATGAAACATTTAAATACTATACGACAGCGACATTTATCGCTTCAGTCGTCGCTCTGGCGGGCACATTCCTGCTGTCATTTATCATCTAA", - "dna_sequence_length": 1338, - "functions": [ - "D-serine transporter" - ], - "id": "CDS_2350", - "location": [ - [ - "NC_000913", - 2477847, - "+", - 1338 - ] - ], - "md5": "8cbfb778fa11aada19cf3ea0a197b61d", - "parent_gene": "", - "protein_md5": "3b2370aab3a5230b8ef0eb39924478ff", - "protein_translation": "MHSQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGTMMGMGPLDMVNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSVDVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYVANKLGADIGSVIVYGLLVGLMASLIGGPLFLKFLGQRLPFKPVPTEFADLKVRDEKTLPSLGATLFTILLPIALMLVKTIAELNMARESGLYILVEFIGNPITAMFIAVFVAYYVLGIRQHMSMGTMLTHTENGFGSIANILLIIGAGGAFNAILKSSSLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDISPEIIAIAIGSGAIGCTIVTDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII", - "protein_translation_length": 445, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946837" - ], - [ - "gene_synonym", - "GI:16130298" - ], - [ - "gene_synonym", - "b2366" - ], - [ - "gene_synonym", - "ASAP:ABE-0007804" - ], - [ - "gene_synonym", - "ECK2362" - ], - [ - "gene_synonym", - "dsdA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00926" - ], - [ - "gene_synonym", - "NP_416867.1" - ], - [ - "gene_synonym", - "EcoGene:EG10249" - ], - [ - "gene_synonym", - "JW2363" - ] - ], - "dna_sequence": "ATGGAAAACGCTAAAATGAACTCGCTCATCGCCCAGTATCCGTTGGTAAAGGATCTGGTTGCTCTTAAAGAAACCACCTGGTTTAATCCTGGCACGACCTCATTGGCTGAAGGTTTACCTTATGTTGGCCTGACCGAACAGGATGTTCAGGACGCCCATGCGCGCTTATCCCGTTTTGCACCCTATCTGGCAAAAGCATTTCCTGAAACTGCTGCCACTGGGGGGATTATTGAATCAGAACTGGTTGCCATTCCAGCTATGCAAAAACGGCTGGAAAAAGAATATCAGCAACCGATCAGCGGGCAACTGTTACTGAAAAAAGATAGCCATTTGCCCATTTCCGGCTCCATAAAAGCACGCGGCGGGATTTATGAAGTCCTGGCACACGCAGAAAAACTGGCTCTGGAAGCGGGGTTGCTGACGCTTGATGATGACTACAGCAAACTGCTTTCTCCGGAGTTTAAACAGTTCTTTAGCCAATACAGCATTGCTGTGGGCTCAACCGGAAATCTGGGGTTATCAATCGGCATTATGAGCGCCCGCATTGGCTTTAAGGTGACAGTTCATATGTCTGCTGATGCCCGGGCATGGAAAAAAGCGAAACTGCGCAGCCATGGCGTTACGGTCGTGGAATATGAGCAAGATTATGGTGTTGCCGTCGAGGAAGGACGTAAAGCAGCGCAGTCTGACCCGAACTGTTTCTTTATTGATGACGAAAATTCCCGCACGTTGTTCCTTGGGTATTCCGTCGCTGGCCAGCGTCTTAAAGCGCAATTTGCCCAGCAAGGCCGTATCGTCGATGCTGATAACCCTCTGTTTGTCTATCTGCCGTGTGGTGTTGGCGGTGGTCCTGGTGGCGTCGCATTCGGGCTTAAACTGGCGTTTGGCGATCATGTTCACTGCTTTTTTGCCGAACCAACGCACTCCCCTTGTATGTTGTTAGGCGTCCATACAGGATTACACGATCAGATTTCTGTTCAGGATATTGGTATCGACAACCTTACCGCAGCGGATGGCCTTGCAGTTGGTCGCGCATCAGGCTTTGTCGGGCGGGCAATGGAGCGTCTGCTGGATGGCTTCTATACCCTTAGCGATCAAACCATGTATGACATGCTTGGCTGGCTGGCGCAGGAAGAAGGTATTCGTCTTGAACCTTCGGCACTGGCGGGTATGGCCGGACCTCAGCGCGTGTGTGCATCAGTAAGTTACCAACAGATGCACGGTTTCAGCGCAGAACAACTGCGTAATACCACTCATCTGGTGTGGGCGACGGGAGGTGGAATGGTGCCGGAAGAAGAGATGAATCAATATCTGGCAAAAGGCCGTTAA", - "dna_sequence_length": 1329, - "functions": [ - "D-serine dehydratase" - ], - "id": "CDS_2351", - "location": [ - [ - "NC_000913", - 2479202, - "+", - 1329 - ] - ], - "md5": "bc467144a287d9d4549b19646765dcb7", - "parent_gene": "", - "protein_md5": "66ae0b1304ebaa72502caea0b4321b60", - "protein_translation": "MENAKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGGGMVPEEEMNQYLAKGR", - "protein_translation_length": 442, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2363" - ], - [ - "gene_synonym", - "emrY" - ], - [ - "gene_synonym", - "GeneID:946835" - ], - [ - "gene_synonym", - "b2367" - ], - [ - "gene_synonym", - "ASAP:ABE-0007806" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52600" - ], - [ - "gene_synonym", - "JW2364" - ], - [ - "gene_synonym", - "EcoGene:EG13283" - ], - [ - "gene_synonym", - "GI:16130299" - ], - [ - "gene_synonym", - "NP_416868.1" - ] - ], - "dna_sequence": "ATGGCAATCACTAAATCAACTCCGGCACCATTAACCGGTGGGACGTTATGGTGCGTCACTATTGCATTGTCATTAGCGACATTTATGCAAATGTTGGATTCCACTATTTCTAACGTCGCAATACCGACAATATCTGGCTTTCTGGGAGCATCAACAGACGAAGGCACCTGGGTTATCACCTCGTTTGGTGTAGCAAATGCCATTGCGATCCCTGTTACTGGCAGGTTGGCACAAAGAATAGGCGAATTAAGATTATTTTTACTTTCAGTCACTTTTTTTTCGCTGTCTTCATTAATGTGTAGCCTATCGACCAATCTTGATGTGCTGATATTTTTTAGAGTCGTTCAGGGGTTAATGGCGGGGCCGTTAATTCCACTGTCACAGAGTTTATTATTAAGGAATTATCCGCCAGAAAAAAGAACATTTGCTCTGGCATTATGGTCAATGACCGTGATTATCGCTCCGATATGTGGGCCGATATTGGGCGGTTATATTTGTGATAACTTTAGCTGGGGTTGGATATTTTTAATCAATGTCCCTATGGGGATTATCGTCCTGACATTATGCTTAACCTTACTTAAAGGAAGAGAAACTGAGACTTCACCGGTCAAAATGAATCTACCAGGACTGACCCTGTTAGTGCTCGGTGTTGGTGGCTTGCAAATTATGCTTGATAAAGGGCGCGATCTGGATTGGTTCAACTCGAGTACAATAATAATATTAACAGTAGTATCAGTTATTTCTCTGATCTCTTTAGTCATTTGGGAGTCGACCTCAGAGAACCCGATTCTTGATCTCAGTTTGTTTAAGTCCCGTAACTTCACCATTGGTATTGTGAGTATCACATGCGCGTATTTATTTTACTCTGGAGCGATCGTCCTTATGCCGCAGTTACTCCAGGAAACGATGGGGTATAATGCGATATGGGCCGGACTTGCTTATGCGCCCATCGGCATCATGCCACTATTAATTTCACCTTTGATAGGACGTTATGGCAACAAAATAGACATGCGGTTGTTAGTGACATTTAGTTTTTTGATGTATGCGGTTTGCTATTACTGGCGTTCTGTGACATTTATGCCAACGATTGATTTTACAGGCATCATTTTGCCGCAGTTTTTTCAGGGATTCGCCGTTGCCTGTTTCTTTTTACCCTTAACAACGATTTCGTTTTCAGGCTTGCCAGATAATAAATTTGCCAATGCCTCGAGTATGAGTAATTTTTTTCGTACCTTGTCAGGATCAGTTGGTACGTCGTTGACAATGACGCTGTGGGGACGACGCGAATCGTTACACCATAGTCAGTTGACAGCAACCATCGATCAATTTAACCCCGTGTTTAATTCATCGTCACAAATTATGGATAAATATTATGGTTCGCTTTCAGGAGTTCTTAATGAAATTAATAATGAAATAACCCAGCAGTCACTTTCTATTTCTGCAAATGAGATTTTCCGTATGGCGGCTATTGCTTTTATCTTACTTACGGTTTTGGTTTGGTTTGCGAAACCGCCGTTTACAGCGAAAGGCGTTGGGTGA", - "dna_sequence_length": 1539, - "functions": [ - "putative multidrug efflux system" - ], - "id": "CDS_2352", - "location": [ - [ - "NC_000913", - 2482176, - "-", - 1539 - ] - ], - "md5": "50ed582cd594680bb8102dee4214bc83", - "parent_gene": "", - "protein_md5": "ba44998f4457e92019e2ad734cc9e0f6", - "protein_translation": "MAITKSTPAPLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTISGFLGASTDEGTWVITSFGVANAIAIPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSLSTNLDVLIFFRVVQGLMAGPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPILGGYICDNFSWGWIFLINVPMGIIVLTLCLTLLKGRETETSPVKMNLPGLTLLVLGVGGLQIMLDKGRDLDWFNSSTIIILTVVSVISLISLVIWESTSENPILDLSLFKSRNFTIGIVSITCAYLFYSGAIVLMPQLLQETMGYNAIWAGLAYAPIGIMPLLISPLIGRYGNKIDMRLLVTFSFLMYAVCYYWRSVTFMPTIDFTGIILPQFFQGFAVACFFLPLTTISFSGLPDNKFANASSMSNFFRTLSGSVGTSLTMTLWGRRESLHHSQLTATIDQFNPVFNSSSQIMDKYYGSLSGVLNEINNEITQQSLSISANEIFRMAAIAFILLTVLVWFAKPPFTAKGVG", - "protein_translation_length": 512, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2364" - ], - [ - "gene_synonym", - "ASAP:ABE-0007808" - ], - [ - "gene_synonym", - "b2368" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52599" - ], - [ - "gene_synonym", - "emrK" - ], - [ - "gene_synonym", - "EcoGene:EG13282" - ], - [ - "gene_synonym", - "GeneID:946840" - ], - [ - "gene_synonym", - "NP_416869.1" - ], - [ - "gene_synonym", - "JW2365" - ], - [ - "gene_synonym", - "GI:16130300" - ] - ], - "dna_sequence": "GTGGAACAGATTAATTCAAATAAAAAACATTCTAACAGAAGAAAATACTTTTCTTTATTGGCGGTAGTTTTATTTATTGCGTTTTCAGGTGCCTATGCCTATTGGTCAATGGAATTAGAAGACATGATTAGTACAGATGACGCCTATGTCACGGGGAATGCAGATCCAATTTCTGCACAAGTCTCAGGTAGTGTCACTGTCGTTAATCATAAAGATACGAACTACGTTCGACAAGGTGACATTTTAGTTTCACTGGATAAAACTGATGCCACTATCGCACTCAATAAAGCTAAAAATAATCTGGCAAATATTGTTCGGCAAACGAATAAACTATACTTACAGGATAAACAATACAGTGCCGAAGTCGCTTCAGCACGTATTCAGTATCAACAATCTTTAGAAGATTATAACCGTCGAGTGCCGTTAGCGAAGCAGGGGGTTATTTCAAAAGAAACGCTGGAGCATACCAAAGATACGTTAATAAGTAGCAAAGCGGCATTGAATGCCGCTATCCAGGCTTATAAAGCGAATAAAGCTTTAGTAATGAACACACCATTAAACCGTCAGCCACAAGTCGTTGAAGCGGCGGATGCAACTAAAGAAGCCTGGTTGGCGCTTAAACGTACGGATATTAAGAGTCCGGTTACCGGCTATATTGCCCAGAGAAGTGTTCAGGTCGGCGAAACAGTGAGCCCCGGACAATCGTTAATGGCTGTCGTACCGGCACGTCAAATGTGGGTTAATGCCAACTTTAAAGAAACACAACTCACGGATGTACGGATTGGTCAATCGGTCAATATTATCAGCGATCTTTATGGTGAAAATGTTGTGTTTCATGGTCGGGTGACAGGGATCAATATGGGAACCGGCAATGCGTTCTCCTTATTACCTGCACAAAATGCGACAGGGAACTGGATCAAAATCGTTCAGCGTGTACCGGTTGAAGTTTCTCTTGATCCAAAAGAACTCATGGAACACCCCTTGCGTATTGGTTTATCGATGACAGCAACTATTGATACGAAGAACGAAGACATTGCCGAGATGCCTGAGCTGGCTTCAACCGTGACCTCCATGCCGGCTTATACCAGTAAGGCTTTAGTTATCGATACCAGTCCGATAGAAAAAGAAATTAGCAACATTATTTCGCATAATGGACAACTTTAA", - "dna_sequence_length": 1164, - "functions": [ - "multidrug resistance efflux pump membrane fusion protein" - ], - "id": "CDS_2353", - "location": [ - [ - "NC_000913", - 2483339, - "-", - 1164 - ] - ], - "md5": "a512bcfdba1d2514a5d55cd6a2fcdfcc", - "parent_gene": "", - "protein_md5": "a8140435235927124084a64f543a9ab2", - "protein_translation": "MEQINSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENVVFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSMTATIDTKNEDIAEMPELASTVTSMPAYTSKALVIDTSPIEKEISNIISHNGQL", - "protein_translation_length": 387, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "evgA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACZ4" - ], - [ - "gene_synonym", - "ECK2365" - ], - [ - "gene_synonym", - "EcoGene:EG11609" - ], - [ - "gene_synonym", - "b2369" - ], - [ - "gene_synonym", - "NP_416870.1" - ], - [ - "gene_synonym", - "GeneID:946841" - ], - [ - "gene_synonym", - "ASAP:ABE-0007817" - ], - [ - "gene_synonym", - "JW2366" - ], - [ - "gene_synonym", - "GI:16130301" - ] - ], - "dna_sequence": "ATGAACGCAATAATTATTGATGACCATCCTCTTGCTATCGCAGCAATTCGTAATTTATTGATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATCGTCTCCGCTAAAAATGACCATTTTTACGGGAAACATTGTGCTGATGCTGGCGCTAATGGTTTCGTGAGTAAAAAAGAAGGCATGAACAATATCATTGCGGCTATTGAAGCTGCAAAAAATGGCTACTGCTATTTCCCCTTCTCTCTCAACCGGTTTGTTGGAAGTTTAACGTCCGACCAGCAAAAACTCGACTCCTTATCGAAACAAGAAATTAGTGTCATGCGGTATATTCTTGATGGCAAGGATAATAATGACATTGCTGAAAAAATGTTCATCAGCAACAAAACTGTCAGCACTTATAAAAGTCGCCTGATGGAAAAATTAGAATGTAAATCACTGATGGATCTTTACACATTCGCACAACGTAACAAAATCGGCTAA", - "dna_sequence_length": 615, - "functions": [ - "response regulator in two-component regulatory system with EvgS" - ], - "id": "CDS_2354", - "location": [ - [ - "NC_000913", - 2483755, - "+", - 615 - ] - ], - "md5": "2335d9ecbe4de6ae1c0184b82d9db67b", - "parent_gene": "", - "protein_md5": "0fc39431cf45f67ef9e76c9a1f225d7f", - "protein_translation": "MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKDNNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQRNKIG", - "protein_translation_length": 204, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11610" - ], - [ - "gene_synonym", - "b2370" - ], - [ - "gene_synonym", - "ECK2366" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30855" - ], - [ - "gene_synonym", - "GeneID:946844" - ], - [ - "gene_synonym", - "evgS" - ], - [ - "gene_synonym", - "NP_416871.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007819" - ], - [ - "gene_synonym", - "JW2367" - ], - [ - "gene_synonym", - "GI:16130302" - ] - ], - "dna_sequence": "ATGAAGTTTTTACCCTATATTTTTCTTCTCTGTTGTGGTCTTTGGTCGACCATAAGTTTCGCAGACGAAGATTACATCGAATATCGTGGCATCAGTAGTAACAACCGTGTCACACTTGATCCACTACGTCTGAGCAACAAGGAATTACGTTGGTTAGCGAGCAAAAAAAATCTTGTGATTGCAGTACATAAGTCCCAAACGGCTACGTTGTTGCATACCGATTCGCAGCAACGGGTTCGTGGTATTAATGCTGATTATTTAAATCTTTTAAAAAGAGCGTTAAATATCAAATTAACACTCCGGGAATACGCAGATCATCAAAAAGCAATGGACGCGCTTGCAGAAGGTGAAGTCGATATAGTGTTATCACATTTAGTTACTTCGCCGCCTCTTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACATCATTACCAGCAGTATGATTTCCCGCTATTTCACTCACTCCTTAAATGTAGTGAAATATTATAACTCGCCGCGTCAATATAATTTTTTCTTGACCAGAAAAGAATCTGTCATTCTTAATGAAGTACTCAATAGATTTGTTGATGCTTTAACAAATGAAGTTCGCTATGAAGTATCACAAAATTGGCTTGATACAGGAAACCTGGCCTTTCTGAACAAACCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCGCCCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGTTTAAATTTTTCTCCGATCACCGTTTCACACAATATCCATGCTGGAACACAGCTTAGCCCCGGAGGATGGGATATAATACCTGGCGCTATTTATAGTGAAGATCGAGAAAATAATGTTTTATTTGCTGAAGCCTTCATAACAACGCCTTACGTTTTTGTCATGCAAAAAGCGCCTGACAGTGAACAAACATTAAAAAAAGGAATGAAAGTTGCCATTCCATATTATTATGAGCTGCATTCGCAATTAAAAGAGATGTATCCGGAGGTTGAATGGATACAGGTCGATAATGCCAGCGCTGCATTTCACAAGGTTAAGGAAGGTGAACTTGATGCTCTGGTCGCGACACAGCTAAATTCGCGTTACATGATCGATCATTACTATCCTAATGAACTTTATCATTTTCTTATTCCTGGCGTTCCGAATGCATCGCTTTCGTTCGCTTTTCCTCGCGGAGAACCGGAACTTAAGGATATTATTAATAAAGCACTGAATGCAATTCCCCCAAGCGAAGTTCTGCGCCTGACGGAAAAATGGATTAAAATGCCCAATGTGACCATTGACACATGGGACCTATATAGCGAGCAATTTTATATTGTTACGACATTATCCGTTTTATTAGTTGGCAGTAGCCTTTTATGGGGATTCTACCTGTTACGCTCAGTTCGTCGTCGTAAAGTCATTCAGGGTGATTTAGAAAACCAAATATCATTCCGAAAAGCACTCTCGGATTCCTTACCGAATCCAACTTATGTTGTAAACTGGCAAGGTAATGTCATTAGTCATAATAGTGCTTTTGAACATTATTTCACTGCGGATTACTACAAAAATGCAATGTTACCATTAGAAAACAGTGACTCACCCTTTAAAGATGTTTTTTCTAATGCGCATGAAGTCACAGCAGAAACGAAAGAAAATCGAACAATATACACACAGGTATTTGAAATTGATAATGGCATCGAGAAAAGATGCATTAATCACTGGCATACATTATGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCTATTATGGGCTTCCTGGAACTTCTGTCGGGTTCTGGTCTTAGCAAGGAGCAACGGGTGGAGGCGATTTCACTTGCCTACGCCACCGGACAATCACTCCTCGGCTTAATTGGTGAAATCCTTGATGTCGACAAAATTGAATCGGGTAACTATCAACTTCAACCACAATGGGTCGATATCCCTACTTTAGTCCAGAACACTTGTCACTCTTTCGGTGCGATTGCTGCAAGCAAATCGATCGCATTAAGTTGCAGCAGTACGTTTCCTGAACATTACCTGGTTAAGATCGACCCTCAGGCGTTTAAGCAGGTCTTATCAAATTTACTGAGTAATGCTCTCAAATTTACCACCGAGGGGGCAGTAAAAATTACGACCTCCCTGGGTCACATTGATGACAACCACGCTGTTATCAAAATGACGATTATGGATTCTGGAAGTGGATTATCGCAGGAAGAACAACAACAACTGTTTAAACGCTACAGCCAAACAAGTGCAGGTCGTCAGCAAACAGGTTCTGGTTTAGGCTTAATGATCTGCAAAGAATTAATTAAAAATATGCAGGGCGATTTGTCATTAGAAAGTCATCCAGGCATAGGAACAACATTTACGATCACAATCCCGGTAGAAATTAGCCAGCAAGTGGCGACTGTCGAGGCAAAAGCAGAACAACCCATCACACTACCTGAAAAGTTGAGCATATTAATCGCGGATGATCATCCGACCAACAGGCTATTACTCAAACGCCAGCTAAATCTATTAGGATATGATGTTGATGAAGCCACTGATGGTGTGCAAGCGCTACACAAAGTCAGTATGCAACATTATGATCTGCTTATTACTGACGTTAATATGCCGAATATGGATGGTTTTGAGTTGACTCGCAAACTCCGTGAGCAAAATTCTTCCTTACCCATCTGGGGGCTTACAGCCAACGCACAGGCTAACGAACGTGAAAAAGGGTTAAGTTGCGGCATGAACTTATGTTTGTTCAAACCGTTGACCCTGGATGTACTGAAAACACATTTAAGTCAGTTACACCAAGTTGCGCATATTGCACCTCAGTATCGCCACCTTGATATCGAAGCCCTGAAAAATAATACGGCGAACGATCTACAACTGATGCAGGAGATTCTCATGACTTTCCAGCATGAAACGCATAAAGATCTACCCGCTGCGTTTCAAGCACTAGAAGCTGGCGATAACAGAACTTTCCATCAGTGTATTCATCGCATCCACGGTGCGGCTAACATCCTGAATTTGCAAAAGTTGATTAATATTAGCCATCAGTTAGAAATAACACCTGTTTCAGATGACAGTAAGCCTGAAATTCTTCAGTTGCTGAACTCTGTAAAAGAACACATTGCAGAGCTGGACCAGGAGATTGCTGTTTTCTGTCAGAAAAATGACTAA", - "dna_sequence_length": 3594, - "functions": [ - "hybrid sensory histidine kinase in two-component regulatory system with EvgA" - ], - "id": "CDS_2355", - "location": [ - [ - "NC_000913", - 2484374, - "+", - 3594 - ] - ], - "md5": "69c95332e4b06bbb85daad9ca12fa2e4", - "parent_gene": "", - "protein_md5": "13cc892ca9e2b99dd7c3d4c2ab23c569", - "protein_translation": "MKFLPYIFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDPLRLSNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLREYADHQKAMDALAEGEVDIVLSHLVTSPPLNNDIAATKPLIITFPALVTTLHDSMRPLTSPKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGHNDYFIGSNIITSSMISRYFTHSLNVVKYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNWLDTGNLAFLNKPLELTEHEKQWIKQHPNLKVLENPYSPPYSMTDENGSVRGVMGDILNIITLQTGLNFSPITVSHNIHAGTQLSPGGWDIIPGAIYSEDRENNVLFAEAFITTPYVFVMQKAPDSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIQVDNASAAFHKVKEGELDALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPPSEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKVIQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENSDSPFKDVFSNAHEVTAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDNAVYICGWQDITETRDLINALEVEKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIAASKSIALSCSSTFPEHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLGHIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAEQPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSSLPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDIEALKNNTANDLQLMQEILMTFQHETHKDLPAAFQALEAGDNRTFHQCIHRIHGAANILNLQKLINISHQLEITPVSDDSKPEILQLLNSVKEHIAELDQEIAVFCQKND", - "protein_translation_length": 1197, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:162135906" - ], - [ - "gene_synonym", - "ECK2367" - ], - [ - "gene_synonym", - "yfdE" - ], - [ - "gene_synonym", - "GeneID:946432" - ], - [ - "gene_synonym", - "EcoGene:EG13284" - ], - [ - "gene_synonym", - "JW2368" - ], - [ - "gene_synonym", - "NP_416872.4" - ], - [ - "gene_synonym", - "b2371" - ], - [ - "gene_synonym", - "ASAP:ABE-0007821" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76518" - ] - ], - "dna_sequence": "ATGACAAATAATGAAAGCAAAGGGCCGTTTGAAGGCTTATTAGTTATCGATATGACACATGTCCTTAATGGACCTTTCGGAACTCAACTTCTTTGTAATATGGGCGCAAGGGTAATTAAAGTTGAGCCGCCGGGTCATGGTGATGATACCCGCACATTTGGTCCCTATGTGGATGGACAGTCACTCTATTACAGTTTTATTAATCATGGCAAAGAGAGTGTGGTTCTTGATTTAAAGAATGATCACGATAAAAGTATATTTATAAATATGCTCAAACAAGCTGATGTATTAGCTGAGAATTTTCGCCCAGGTACAATGGAAAAACTGGGGTTTTCATGGGAAACGCTTCAAGAAATCAACCCGCGCCTCATATATGCTTCATCGTCAGGTTTCGGACATACCGGTCCGCTAAAAGATGCTCCTGCCTACGATACCATCATTCAGGCAATGAGCGGGATAATGATGGAAACAGGATATCCTGATGCTCCGCCAGTGCGCGTTGGTACATCTCTTGCGGATCTATGCGGCGGTGTCTATTTATTCAGCGGAATAGTGAGTGCACTTTATGGCCGCGAAAAGAGCCAGAGAGGGGCGCATGTCGATATAGCGATGTTTGATGCCACGCTGAGTTTTCTGGAGCATGGTCTGATGGCATATATCGCAACTGGGAAGTCACCACAACGTCTGGGAAATCGCCATCCCTACATGGCACCTTTTGATGTTTTCAATACTCAGGATAAGCCGATTACGATTTGTTGTGGTAATGACAAGCTTTTTTCTGCGTTATGCCAGGCACTGGAGCTTACGGAACTGGTTAATGATCCCCGATTTAGCAGCAATATTTTACGCGTACAAAACCAGGCTATTCTTAAACAATATATTGAGCGGACGTTAAAAACGCAGGCAGCTGAAGTTTGGTTAGCCAGAATACATGAAGTTGGTGTACCCGTCGCGCCGTTATTAAGTGTGGCTGAGGCCATTAAATTGCCACAAACTCAGGCGAGAAATATGTTGATTGAAGCCGGGGGAATAATGATGCCGGGTAATCCGATAAAAATCAGCGGCTGCGCGGACCCGCATGTTATGCCGGGAGCGGCAACGCTCGACCAGCATGGGGAACAAATTCGCCAGGAGTTCTCATCATAA", - "dna_sequence_length": 1146, - "functions": [ - "acetyl-CoA:oxalate CoA-transferase" - ], - "id": "CDS_2356", - "location": [ - [ - "NC_000913", - 2489168, - "-", - 1146 - ] - ], - "md5": "a57b387fe76f55abd350c2f1cc3aa4b6", - "parent_gene": "", - "protein_md5": "8155697a9afcb04958b3261f25646398", - "protein_translation": "MTNNESKGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAPPVRVGTSLADLCGGVYLFSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMAYIATGKSPQRLGNRHPYMAPFDVFNTQDKPITICCGNDKLFSALCQALELTELVNDPRFSSNILRVQNQAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQARNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEFSS", - "protein_translation_length": 381, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfdV" - ], - [ - "gene_synonym", - "NP_416873.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA49" - ], - [ - "gene_synonym", - "ECK2368" - ], - [ - "gene_synonym", - "GeneID:949110" - ], - [ - "gene_synonym", - "JW2369" - ], - [ - "gene_synonym", - "b2372" - ], - [ - "gene_synonym", - "GI:16130304" - ], - [ - "gene_synonym", - "EcoGene:EG14144" - ], - [ - "gene_synonym", - "ASAP:ABE-0007824" - ] - ], - "dna_sequence": "ATGCTAACATTTTTTATTGGCGATTTATTGCCTATTATCGTAATCATGCTGTTGGGTTATTTTAGCGGCAGACGAGAAACATTTTCAGAAGATCAAGCTCGGGCATTTAATAAACTGGTATTAAACTACGCGCTTCCTGCGGCTCTATTTGTATCTATTACTCGGGCAAACAGGGAAATGATTTTTGCGGACACTCGTCTGACCCTTGTATCACTTGTGGTTATTGTCGGATGTTTCTTTTTCTCCTGGTTCGGTTGCTACAAATTTTTTAAACGTACCCATGCAGAAGCAGCTGTATGTGCATTAATTGCAGGTTCACCTACCATTGGATTCCTGGGGTTTGCAGTTCTCGATCCTATTTATGGTGATTCCGTATCAACAGGTTTAGTGGTAGCAATTATTTCTATTATTGTTAACGCAATTACTATTCCTATTGGTCTGTATTTGCTGAATCCTTCTTCAGGAGCGGATGGTAAGAAGAATAGTAATCTGAGCGCATTAATTTCTGCGGCAAAGGAGCCAGTAGTATGGGCACCTGTTCTGGCAACGATCCTGGTGTTGGTTGGGGTAAAAATTCCGGCAGCATGGGACCCAACCTTTAATCTGATTGCGAAGGCTAACTCAGGGGTAGCGGTATTCGCTGCGGGGTTGACTCTGGCTGCACATAAATTCGAGTTCAGTGCCGAAATTGCTTATAACACCTTCCTGAAGCTGATTCTGATGCCACTGGCACTGCTTCTCGTTGGTATGGCATGTCATTTGAACAGCGAACATCTGCAGATGATGGTACTGGCAGGCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCATTGGCTGTGAGCGTACTGGGCTTTGTCGTCACGGCTCCCTTGTGGATTTATGTCAGTCGACTGGTTTCATAA", - "dna_sequence_length": 945, - "functions": [ - "putative transporter" - ], - "id": "CDS_2357", - "location": [ - [ - "NC_000913", - 2490186, - "-", - 945 - ] - ], - "md5": "403b703baa3671936b64f06eb546d880", - "parent_gene": "", - "protein_md5": "7e0148b9955b55d6cbdc9ebbfda702b9", - "protein_translation": "MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYALPAALFVSITRANREMIFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCALIAGSPTIGFLGFAVLDPIYGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKKNSNLSALISAAKEPVVWAPVLATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLTLAAHKFEFSAEIAYNTFLKLILMPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGIIIASRFNVYTRTGTASLAVSVLGFVVTAPLWIYVSRLVS", - "protein_translation_length": 314, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFI0" - ], - [ - "gene_synonym", - "ECK2369" - ], - [ - "gene_synonym", - "yfdU" - ], - [ - "gene_synonym", - "GeneID:946845" - ], - [ - "gene_synonym", - "NP_416874.1" - ], - [ - "gene_synonym", - "b2373" - ], - [ - "gene_synonym", - "GI:16130305" - ], - [ - "gene_synonym", - "JW2370" - ], - [ - "gene_synonym", - "EcoGene:EG14143" - ], - [ - "gene_synonym", - "ASAP:ABE-0007826" - ], - [ - "gene_synonym", - "oxc" - ] - ], - "dna_sequence": "ATGTCAGATCAACTTCAAATGACAGATGGTATGCATATCATCGTTGAAGCATTAAAACAGAATAATATTGACACTATTTATGGTGTTGTAGGTATTCCTGTGACGGATATGGCACGCCATGCCCAGGCGGAAGGCATTCGTTATATTGGTTTTCGTCATGAGCAGTCGGCAGGCTATGCCGCTGCGGCAAGCGGTTTTCTTACCCAAAAACCGGGGATCTGCCTGACAGTTTCTGCGCCAGGATTCCTCAATGGTTTGACCGCATTGGCCAACGCAACGGTAAATGGTTTTCCGATGATCATGATTAGCGGCTCCAGCGACCGCGCGATCGTCGACCTACAGCAAGGTGATTATGAAGAGCTGGACCAAATGAATGCGGCAAAACCGTATGCCAAAGCAGCATTTCGCGTTAATCAGCCGCAGGATCTTGGCATTGCATTGGCACGCGCTATCCGGGTCTCTGTATCGGGTCGCCCTGGCGGAGTTTATCTTGATTTGCCAGCAAATGTCCTGGCCGCGACGATGGAAAAAGACGAAGCGTTAACCACGATTGTTAAAGTTGAAAATCCGTCGCCAGCATTATTGCCATGCCCGAAGTCAGTCACTAGCGCAATTTCGCTTTTAGCAAAAGCTGAACGGCCATTAATTATCCTTGGCAAAGGCGCGGCGTATTCACAAGCTGATGAACAGCTTCGTGAATTTATTGAAAGTGCTCAGATTCCATTCCTGCCAATGTCTATGGCGAAAGGGATCCTTGAAGATACGCATCCACTTTCTGCGGCAGCTGCGCGTTCGTTTGCCCTGGCAAATGCTGACGTTGTCATGCTTGTTGGTGCACGACTGAATTGGTTATTGGCACACGGTAAAAAAGGATGGGCGGCAGATACACAGTTTATTCAACTGGATATTGAACCGCAGGAAATTGACAGCAACCGCCCCATTGCTGTGCCAGTCGTTGGTGATATTGCATCCAGTATGCAAGGTATGCTGGCAGAACTGAAACAAAACACATTTACGACTCCACTGGTATGGCGCGATATTTTAAATATCCACAAGCAGCAAAATGCACAAAAAATGCATGAAAAATTAAGTACAGATACTCAACCATTAAATTACTTTAATGCATTAAGTGCTGTGCGCGACGTATTGCGCGAGAACCAGGATATTTATTTAGTTAATGAAGGTGCAAATACCCTGGATAATGCACGAAATATTATTGATATGTATAAACCACGTCGTCGTCTGGATTGTGGTACCTGGGGTGTCATGGGCATCGGTATGGGCTATGCCATCGGTGCTAGCGTGACTTCTGGTTCTCCGGTTGTCGCCATTGAAGGTGATAGTGCTTTTGGTTTCAGTGGGATGGAAATTGAAACGATTTGTCGATATAACCTGCCGGTGACGATCGTTATTTTTAATAATGGCGGCATCTACAGAGGAGACGGTGTTGATCTCAGTGGCGCTGGTGCACCATCACCAACGGATCTGTTGCACCATGCAAGGTATGACAAATTAATGGATGCGTTTCGTGGCGTTGGCTATAACGTCACCACGACAGATGAACTTCGTCATGCTTTAACCACCGGTATTCAGTCGCGCAAACCGACCATTATTAATGTGGTCATCGACCCTGCAGCAGGAACTGAAAGTGGCCATATTACCAAACTTAACCCAAAACAAGTCGCTGGTAATTAA", - "dna_sequence_length": 1695, - "functions": [ - "oxalyl CoA decarboxylase, ThDP-dependent" - ], - "id": "CDS_2358", - "location": [ - [ - "NC_000913", - 2491950, - "-", - 1695 - ] - ], - "md5": "085f72ff9bb68e31ee4a81db0ff64c8a", - "parent_gene": "", - "protein_md5": "77ee9dd7abd037d9298ee614cd78d715", - "protein_translation": "MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVVGDIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQVAGN", - "protein_translation_length": 564, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "frc" - ], - [ - "gene_synonym", - "ECK2370" - ], - [ - "gene_synonym", - "NP_416875.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69902" - ], - [ - "gene_synonym", - "ASAP:ABE-0007828" - ], - [ - "gene_synonym", - "GeneID:946842" - ], - [ - "gene_synonym", - "GI:16130306" - ], - [ - "gene_synonym", - "JW2371" - ], - [ - "gene_synonym", - "EcoGene:EG14145" - ], - [ - "gene_synonym", - "yfdW" - ], - [ - "gene_synonym", - "b2374" - ] - ], - "dna_sequence": "ATGTCAACTCCACTTCAAGGAATTAAAGTTCTCGATTTCACCGGTGTGCAATCTGGCCCATCTTGTACTCAAATGCTGGCCTGGTTTGGCGCTGACGTTATTAAAATTGAACGTCCCGGCGTTGGTGACGTAACGCGTCACCAGCTGCGAGATATTCCTGATATCGATGCGCTTTACTTCACCATGCTTAACAGTAACAAACGTTCTATTGAGTTAAATACCAAAACAGCGGAAGGCAAAGAGGTAATGGAAAAGCTGATCCGCGAAGCTGATATCTTAGTCGAGAACTTTCATCCAGGGGCCATTGATCACATGGGCTTCACCTGGGAGCATATTCAAGAAATCAATCCACGTCTGATTTTTGGTTCGATCAAAGGGTTTGATGAGTGTTCGCCTTATGTGAATGTAAAAGCCTATGAAAACGTTGCTCAGGCAGCGGGTGGCGCGGCATCCACTACGGGTTTTTGGGATGGTCCGCCGCTGGTAAGCGCTGCAGCGTTGGGTGACAGCAACACCGGAATGCATTTGCTGATCGGTTTACTTGCTGCTTTGCTGCATCGCGAAAAAACGGGGCGTGGGCAACGAGTCACCATGTCAATGCAGGATGCCGTATTGAACCTTTGCCGCGTGAAATTACGTGACCAGCAGCGTCTCGATAAATTGGGTTATCTGGAAGAATACCCGCAGTATCCGAATGGTACATTTGGTGATGCAGTTCCCCGCGGTGGTAATGCAGGTGGTGGCGGTCAGCCTGGCTGGATCCTGAAATGTAAAGGCTGGGAAACCGATCCTAACGCCTATATTTATTTCACTATTCAGGAGCAAAACTGGGAAAACACCTGTAAAGCCATCGGCAAACCAGAATGGATTACCGATCCGGCATACAGTACAGCCCATGCACGACAGCCACATATTTTCGATATTTTTGCTGAAATCGAAAAATACACTGTCACTATTGATAAACATGAAGCGGTGGCCTATTTGACTCAGTTTGATATTCCTTGTGCACCGGTTTTAAGTATGAAAGAAATTTCACTTGATCCCTCTTTGCGCCAAAGTGGCAGTGTTGTTGAAGTGGAACAACCGTTGCGTGGAAAATATCTGACCGTTGGTTGTCCAATGAAATTCTCTGCCTTTACGCCGGATATTAAAGCTGCGCCGCTATTAGGTGAACATACCGCTGCTGTATTGCAGGAGCTGGGTTATAGCGACGATGAAATTGCTGCAATGAAGCAAAACCACGCCATCTGA", 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"gene_synonym", - "JW2372" - ], - [ - "gene_synonym", - "GeneID:949108" - ], - [ - "gene_synonym", - "EcoGene:EG14146" - ], - [ - "gene_synonym", - "ASAP:ABE-0007835" - ], - [ - "gene_synonym", - "b2375" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76520" - ] - ], - "dna_sequence": "ATGAAACGTTTAATTATGGCCACGATGGTCACAGCAATTCTGGCATCTTCAACTGTATGGGCTGCTGATAATGCTCCGGTAGCGGCACAACAGCAAACTCAGCAAGTTCAGCAAACCCAGAAAACGGCAGCGGCAGCAGAGCGTATCTCTGAACAAGGTTTATATGCGATGCGTGACGTGCAGGTAGCGCGCCTGGCTCTGTTTCATGGCGATCCAGAAAAGGCAAAAGAACTGACCAATGAAGCTTCCGCTTTGCTGTCAGATGACAGTACCGAATGGGCAAAGTTCGCTAAGCCAGGTAAAAAGACCAATCTCAATGATGACCAATATATTGTCATTAATGCATCTGTCGGAATTTCTGAGAGTTATGTAGCAACTCCCGAAAAAGAAGCCGCGATAAAAATTGCCAATGAAAAAATGGCGAAAGGGGATAAAAAGGGCGCAATGGAAGAGCTTCGCCTGGCCGGTGTTGGCGTAATGGAAAACCAATATCTGATGCCACTTAAACAGACTCGTAATGCACTTGCTGATGCGCAGAAACTGCTTGATAAAAAGCAATACTACGAGGCAAACCTGGCGCTTAAAGGTGCGGAAGATGGAATCATCGTCGATAGCGAAGCACTGTTTGTGAACTAA", - "dna_sequence_length": 636, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2360", - "location": [ - [ - "NC_000913", - 2494402, - "-", - 636 - ] - ], - "md5": "aaa246fe9bd7ce93a4add43d4e9d6202", - "parent_gene": "", - "protein_md5": "b07a894e3f230acc90c1a5273123d953", - "protein_translation": "MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAAAAERISEQGLYAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKTNLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVMENQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN", - "protein_translation_length": 211, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2372" - ], - [ - "gene_synonym", - "ASAP:ABE-0007839" - ], - [ - "gene_synonym", - "EcoGene:EG14376" - ], - [ - "gene_synonym", - "NP_416877.1" - ], - [ - "gene_synonym", - "ypdI" - ], - [ - "gene_synonym", - "GeneID:949107" - ], - [ - "gene_synonym", - "GI:16130308" - ], - [ - "gene_synonym", - "JW2373" - ], - [ - "gene_synonym", - "b2376" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:O32528" - ] - ], - "dna_sequence": "ATGAAAGTAAACTTAATACTTTTCAGCTTATTTTTATTGGTCTCTATTATGGCATGCAATGTTTTTGCATTTTCCATTTCGGGTGGTGGAAGTGAGAGGAGCTATAAAGAGACTGAAAAAACATCAGCGATGACGACCACACACTCTACAAAACTTCAGCCATCACAGGCGATTTTGTTTAAGATGAGAGAAGATGCGCCACCATTAAACCTCACAGAAGAAATGCCGCCCCCTTTTCCGACAAAGGCGAATTATCTTATTCATCCTGTGCGATAG", - "dna_sequence_length": 276, - "functions": [ - "putative lipoprotein involved in colanic acid biosynthesis" - ], - "id": "CDS_2361", - "location": [ - [ - "NC_000913", - 2494698, - "+", - 276 - ] - ], - "md5": "3a368a294e2aa8acd9d8a48835facad8", - "parent_gene": "", - "protein_md5": "f1de08eee2dd68aad0b51a9643fd73e7", - "protein_translation": "MKVNLILFSLFLLVSIMACNVFAFSISGGGSERSYKETEKTSAMTTTHSTKLQPSQAILFKMREDAPPLNLTEEMPPPFPTKANYLIHPVR", - "protein_translation_length": 91, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2373" - ], - [ - "gene_synonym", - "NP_416878.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007841" - ], - [ - "gene_synonym", - "yfdY" - ], - [ - "gene_synonym", - "EcoGene:EG14147" - ], - [ - "gene_synonym", - "GI:16130309" - ], - [ - "gene_synonym", - "GeneID:948842" - ], - [ - "gene_synonym", - "b2377" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76521" - ], - [ - "gene_synonym", - "JW2374" - ] - ], - "dna_sequence": "ATGATTAATTTATGGATGTTTCTCGCCCTGTGTATTGTCTGCGTAAGCGGCTACATCGGTCAGGTACTGAACGTGGTATCGGCGGTCTCTTCTTTCTTCGGCATGGTGATCCTCGCTGCACTCATTTATTACTTCACCATGTGGTTAACTGGCGGTAATGAACTAGTGACGGGGATATTTATGTTTCTTGCCCCGGCTTGTGGCTTGATGATTCGCTTTATGGTGGGGTATGGCAGGCGGTAG", - "dna_sequence_length": 243, - "functions": [ - "DUF2545 family putative inner membrane protein" - ], - "id": "CDS_2362", - "location": [ - [ - "NC_000913", - 2495292, - "-", - 243 - ] - ], - "md5": "7b966701363ee7c3662e7b746a969ad3", - "parent_gene": "", - "protein_md5": "091c2d0c6fb2a0b381797e22f2b05b47", - "protein_translation": "MINLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYYFTMWLTGGNELVTGIFMFLAPACGLMIRFMVGYGRR", - "protein_translation_length": 80, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12901" - ], - [ - "gene_synonym", - "GI:90111426" - ], - [ - "gene_synonym", - "ECK2374" - ], - [ - "gene_synonym", - "ASAP:ABE-0007848" - ], - [ - "gene_synonym", - "GeneID:946847" - ], - [ - "gene_synonym", - "NP_416879.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACV2" - ], - [ - "gene_synonym", - "b2378" - ], - [ - "gene_synonym", - "lpxP" - ], - [ - "gene_synonym", - "ddg" - ], - [ - "gene_synonym", - "JW2375" - ] - ], - "dna_sequence": "ATGTTTCCACAATGCAAATTTTCCCGCGAGTTTCTACATCCTCGCTACTGGCTCACATGGTTTGGGCTTGGTGTACTCTGGCTTTGGGTACAGCTTCCTTATCCTGTTCTCTGCTTTCTCGGCACGCGTATTGGCGCAATGGCGCGACCATTCCTGAAACGTCGTGAATCTATCGCCCGTAAAAACCTGGAACTTTGTTTCCCGCAGCATTCTGCGGAAGAACGCGAGAAGATGATTGCCGAAAACTTTCGTTCACTCGGCATGGCGCTGGTAGAAACCGGCATGGCATGGTTCTGGCCCGACAGTCGCGTACGTAAATGGTTTGATGTTGAAGGGTTGGATAACCTTAAACGCGCACAAATGCAAAATCGCGGCGTAATGGTTGTCGGCGTCCATTTTATGTCGCTGGAACTGGGCGGCCGCGTGATGGGACTGTGCCAACCAATGATGGCTACCTATCGTCCACATAATAATCAGCTGATGGAATGGGTGCAGACCCGTGGGCGCATGCGCTCTAACAAAGCGATGATCGGCAGAAATAATCTGCGCGGCATTGTCGGTGCACTGAAGAAAGGTGAAGCGGTATGGTTTGCTCCCGATCAGGATTATGGTCGTAAAGGCAGCTCCTTCGCGCCGTTCTTTGCGGTGGAAAATGTCGCCACAACCAATGGCACCTATGTTCTCTCCCGTCTCTCTGGCGCAGCCATGTTGACCGTAACGATGGTAAGAAAAGCGGATTACAGCGGATATCGTTTGTTCATCACCCCAGAGATGGAAGGCTACCCGACAGATGAAAATCAAGCCGCTGCCTATATGAACAAGATTATCGAGAAAGAGATCATGCGCGCACCGGAGCAGTACCTCTGGATCCACCGTCGCTTTAAAACGCGCCCGGTGGGAGAATCGTCGTTGTACATTTAA", - "dna_sequence_length": 921, - "functions": [ - "palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase" - ], - "id": "CDS_2363", - "location": [ - [ - "NC_000913", - 2495645, - "+", - 921 - ] - ], - "md5": "3c5b716d395b7fbacde6fac30f58ad16", - "parent_gene": "", - "protein_md5": "b89b8135a0832160fefc7ab66c6078a5", - "protein_translation": "MFPQCKFSREFLHPRYWLTWFGLGVLWLWVQLPYPVLCFLGTRIGAMARPFLKRRESIARKNLELCFPQHSAEEREKMIAENFRSLGMALVETGMAWFWPDSRVRKWFDVEGLDNLKRAQMQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNQLMEWVQTRGRMRSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYGRKGSSFAPFFAVENVATTNGTYVLSRLSGAAMLTVTMVRKADYSGYRLFITPEMEGYPTDENQAAAYMNKIIEKEIMRAPEQYLWIHRRFKTRPVGESSLYI", - "protein_translation_length": 306, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:7751622" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P610" - ], - [ - "gene_synonym", - "EcoGene:EG14485" - ], - [ - "gene_synonym", - "ypdK" - ], - [ - "gene_synonym", - "YP_002791250.1" - ], - [ - "gene_synonym", - "GI:226524735" - ], - [ - "gene_synonym", - "b4680" - ], - [ - "gene_synonym", - "ECK4495" - ] - ], - "dna_sequence": "GTGAAATATTTCTTTATGGGCATTTCTTTTATGGTCATCGTTTGGGCCGGTACTTTTGCCCTGATGATCTAA", - "dna_sequence_length": 72, - "functions": [ - "inner membrane protein" - ], - "id": "CDS_2364", - "location": [ - [ - "NC_000913", - 2496921, - "+", - 72 - ] - ], - "md5": "21a4765c01ab9e0c8997da8f687e5241", - "parent_gene": "", - "protein_md5": "15d7cd31fdfbd36fd52ef0cf3e1bb039", - "protein_translation": "MKYFFMGISFMVIVWAGTFALMI", - "protein_translation_length": 23, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "alaC" - ], - [ - "gene_synonym", - "ECK2375" - ], - [ - "gene_synonym", - "NP_416880.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007850" - ], - [ - "gene_synonym", - "GI:16130311" - ], - [ - "gene_synonym", - "b2379" - ], - [ - "gene_synonym", - "GeneID:946850" - ], - [ - "gene_synonym", - "yfdZ" - ], - [ - "gene_synonym", - "EcoGene:EG14198" - ], - [ - "gene_synonym", - "JW2376" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77434" - ] - ], - "dna_sequence": "ATGGCTGACACTCGCCCTGAACGTCGCTTTACGCGCATTGATCGTCTCCCGCCCTACGTTTTTAACATCACCGCTGAACTGAAAATGGCTGCGCGTCGGCGCGGCGAAGATATTATCGATTTCAGCATGGGTAACCCGGACGGTGCGACTCCGCCGCATATCGTCGAAAAATTATGTACTGTGGCCCAGCGCCCGGACACGCATGGTTACTCCACTTCACGCGGCATTCCGCGGTTACGTCGCGCCATTTCCCGCTGGTATCAGGATCGCTACGACGTTGAAATCGACCCGGAATCAGAAGCCATCGTCACTATTGGTTCGAAAGAGGGCCTGGCGCATCTGATGCTGGCGACGCTGGATCATGGTGACACGGTGCTGGTGCCGAATCCAAGTTACCCGATCCATATTTATGGCGCGGTGATTGCCGGGGCGCAGGTACGCTCAGTGCCGCTGGTGGAAGGTGTCGATTTCTTCAACGAACTGGAGCGAGCCATTCGTGAAAGTTATCCGAAACCGAAGATGATGATCCTCGGCTTCCCGTCAAACCCAACCGCGCAATGCGTGGAACTGGAGTTCTTCGAAAAAGTAGTGGCGCTGGCGAAACGCTACGATGTGCTGGTGGTCCATGACCTGGCCTATGCCGATATCGTCTACGATGGCTGGAAAGCGCCGTCAATTATGCAGGTACCGGGTGCACGCGATGTGGCAGTCGAGTTCTTTACGCTGTCGAAAAGCTACAACATGGCGGGCTGGCGTATCGGCTTTATGGTTGGCAACAAAACGCTGGTCAGCGCCCTGGCTCGTATTAAAAGCTATCACGATTACGGCACCTTTACGCCGTTGCAGGTGGCGGCGATTGCGGCGCTGGAGGGCGATCAACAGTGCGTGCGCGACATTGCCGAACAGTACAAACGCCGCCGTGATGTATTGGTTAAAGGGCTGCATGAAGCGGGCTGGATGGTTGAAATGCCGAAGGCTTCGATGTATGTCTGGGCGAAAATCCCGGAACCATATGCGGCCATGGGATCGCTGGAATTTGCCAAGAAGCTCCTTAACGAAGCGAAGGTTTGTGTCTCGCCGGGGATTGGCTTTGGCGACTATGGTGATACGCATGTTCGCTTTGCACTGATTGAAAACCGCGACCGTATTCGTCAGGCCATCAGAGGGATTAAAGCGATGTTCCGTGCCGACGGTTTACTACCCGCCAGCAGCAAACATATTCACGAAAACGCGGAATAA", - "dna_sequence_length": 1239, - "functions": [ - "glutamate-pyruvate aminotransferase", - "glutamic-pyruvic transaminase (GPT)", - "alanine transaminase" - ], - "id": "CDS_2365", - "location": [ - [ - "NC_000913", - 2498295, - "-", - 1239 - ] - ], - "md5": "d845d80ea7d96528d19ca014633ebb1d", - "parent_gene": "", - "protein_md5": "8902fe615cdfe858076263ea63c7a812", - "protein_translation": "MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGATPPHIVEKLCTVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRADGLLPASSKHIHENAE", - "protein_translation_length": 412, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416881.1" - ], - [ - "gene_synonym", - "ECK2376" - ], - [ - "gene_synonym", - "JW5388" - ], - [ - "gene_synonym", - "GeneID:946723" - ], - [ - "gene_synonym", - "b2380" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA93" - ], - [ - "gene_synonym", - "ASAP:ABE-0007855" - ], - [ - "gene_synonym", - "EcoGene:EG14148" - ], - [ - "gene_synonym", - "ypdA" - ], - [ - "gene_synonym", - "GI:16130312" - ] - ], - "dna_sequence": "GTGCACGAAATATTCAACATGCTGCTGGCGGTCTTCGATCGGGCAGCGTTAATGCTTATCTGCCTGTTCTTTCTCATCCGTATCCGCCTGTTTCGCGAACTGTTGCACAAGTCGGCGCACTCCCCAAAAGAATTGCTCGCCGTTACCGCCATTTTCTCGCTGTTCGCCCTGTTCAGCACCTGGTCCGGCGTTCCCGTAGAAGGCTCGCTGGTGAACGTACGTATTATCGCGGTGATGTCCGGCGGGATTCTGTTTGGCCCGTGGGTAGGCATCATTACCGGCGTGATTGCGGGTATTCACCGGTATTTAATTGATATCGGCGGCGTGACGGCGATCCCCTGCTTTATCACCAGCATTCTGGCGGGTTGTATATCGGGCTGGATCAACCTGAAAATCCCCAAAGCACAGCGCTGGCGCGTCGGTATTCTCGGCGGCATGTTGTGTGAGACGTTGACCATGATTCTGGTAATTGTCTGGGCACCAACTACCGCGTTGGGGATCGATATCGTCTCTAAAATCGGCATTCCAATGATCCTCGGTAGCGTCTGTATCGGCTTTATTGTGCTTCTGGTGCAAAGCGTTGAGGGCGAAAAAGAGGCCAGCGCCGCGCGGCAGGCCAAGCTGGCGCTGGATATCGCCAACAAAACGCTACCGCTGTTTCGCCATGTCAATAGCGAGTCATTACGCAAGGTCTGCGAAATTATCCGCGATGACATTCACGCCGATGCGGTGGCGATTACTAATACCGATCATGTGCTGGCCTATGTTGGCGTGGGTGAACATAACTATCAGAATGGCGATGACTTCATTAGCCCGACTACCCGTCAGGCGATGAATTACGGAAAAATCATCATTAAAAACAATGATGAAGCCCACCGCACACCAGAGATTCATTCCATGCTGGTGATCCCATTGTGGGAGAAAGGGGTCGTGACCGGAACGCTGAAAATTTACTACTGCCACGCGCATCAGATCACCTCGTCATTACAGGAAATGGCGGTCGGTCTGTCGCAAATCATCTCCACGCAACTGGAGGTTTCACGCGCCGAGCAGCTACGTGAAATGGCAAATAAGGCAGAGCTTCGCGCCCTGCAAAGCAAAATTAATCCCCATTTTCTGTTTAACGCTCTGAACGCTATTTCATCGTCAATCCGTCTGAATCCGGATACCGCTCGCCAGTTGATCTTTAATCTGTCGCGTTATCTGCGCTATAACATTGAATTAAAAGACGATGAGCAAATCGATATCAAAAAAGAGCTGTATCAAATTAAAGACTATATTGCCATTGAGCAGGCCCGCTTTGGTGACAAGCTGACGGTTATCTATGATATTGATGAAGAGGTGAATTGCTGCATTCCCAGCCTGCTGATCCAGCCGTTGGTGGAGAACGCCATTGTCCACGGTATTCAGCCTTGCAAAGGTAAAGGCGTTGTCACCATCAGCGTTGCAGAGTGCGGAAATCGGGTACGCATTGCGGTGCGAGATACCGGGCACGGCATCGATCCAAAGGTGATTGAGCGGGTCGAAGCGAATGAAATGCCGGGCAATAAAATTGGCCTGCTGAATGTCCATCATCGCGTGAAGTTATTGTATGGCGAGGGGCTGCATATCCGCCGCCTGGAGCCGGGGACGGAAATTGCGTTTTACATTCCTAACCAACGCACCCCAGTCGCCTCACAGGCTACGTTATTGCTTTGA", 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{ - "aliases": [ - [ - "gene_synonym", - "ECK2377" - ], - [ - "gene_synonym", - "b2381" - ], - [ - "gene_synonym", - "ASAP:ABE-0007857" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE39" - ], - [ - "gene_synonym", - "EcoGene:EG14149" - ], - [ - "gene_synonym", - "JW2378" - ], - [ - "gene_synonym", - "NP_416882.1" - ], - [ - "gene_synonym", - "ypdB" - ], - [ - "gene_synonym", - "GeneID:947395" - ], - [ - "gene_synonym", - "GI:16130313" - ] - ], - "dna_sequence": "GTGAAAGTCATCATTGTTGAAGACGAATTCCTGGCACAACAGGAACTGAGCTGGCTAATTAAAGAGCACAGCCAGATGGAGATTGTCGGCACCTTTGACGACGGTCTGGACGTGTTGAAGTTTTTGCAGCATAACCGCGTCGACGCCATTTTTCTGGATATCAATATTCCGTCGCTGGATGGCGTGTTGCTGGCGCAAAACATCAGCCAGTTCGCCCATAAACCGTTTATTGTGTTCATCACCGCGTGGAAAGAACATGCGGTAGAAGCGTTTGAACTGGAGGCGTTTGACTACATTCTCAAACCGTATCAGGAGTCACGTATTACCGGGATGCTGCAAAAACTGGAAGCGGCCTGGCAACAACAGCAGACCAGCAGTACGCCTGCCGCGACGGTAACGCGTGAGAATGACACCATTAATCTGGTGAAAGATGAGCGAATAATCGTCACGCCAATTAACGATATCTATTACGCCGAAGCGCACGAGAAAATGACCTTTGTCTATACGCGGCGTGAATCCTACGTAATGCCGATGAACATTACCGAATTTTGCAGCAAACTGCCGCCGTCGCATTTTTTCCGCTGCCATCGCTCATTTTGTGTCAATCTGAACAAAATACGCGAAATCGAACCGTGGTTTAATAACACCTACATTCTGCGACTGAAAGATCTGGATTTTGAAGTGCCGGTCAGCCGCAGCAAAGTGAAAGAATTTCGCCAGTTAATGCATCTTTAA", - "dna_sequence_length": 735, - "functions": [ - "response regulator activating yhjX", - "pyruvate-responsive YpdAB two-component system" - ], - "id": "CDS_2367", - "location": [ - [ - "NC_000913", - 2500383, - "+", - 735 - ] - ], - "md5": "273bb76ff28fbe3d65fb1015bec8e2d4", - "parent_gene": "", - "protein_md5": "0c2815c3b688a45b37f4d302f75c804f", - "protein_translation": "MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLMHL", - "protein_translation_length": 244, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77396" - ], - [ - "gene_synonym", - "ASAP:ABE-0007859" - ], - [ - "gene_synonym", - "b2382" - ], - [ - "gene_synonym", - "NP_416883.1" - ], - [ - "gene_synonym", - "JW2379" - ], - [ - "gene_synonym", - "GeneID:946856" - ], - [ - "gene_synonym", - "GI:16130314" - ], - [ - "gene_synonym", - "EcoGene:EG14150" - ], - [ - "gene_synonym", - "ECK2378" - ], - [ - "gene_synonym", - "ypdC" - ] - ], - "dna_sequence": "ATGAAAGCACCAGGCTTGCCCGCCGATCAACAATTTTTCGCCGATCTGTTCAGCGGCCTGGTGCTTAACCCGCAACTACTGGGGCGCGTCTGGTTTGCCAGCCAGCCTGCCTCGTTGCCGGTGGGCAGTTTATGTATTGATTTTCCCCGTCTGGATATCGTGCTGCGCGGCGAATACGGCAATCTGCTGGAAGCAAAGCAGCAACGTTTGGTGGAAGGAGAAATGCTGTTTATTCCGGCGCGCGCGGCTAATTTACCGGTCAACAACAAACCGGTGATGCTGTTAAGCCTGGTGTTCGCTCCGACCTGGCTTGGGTTATCGTTTTACGATAGCCGCACCACGTCGTTGTTGCATCCTGCTCGCCAGATCCAGCTTCCCAGCCTGCAACGCGGTGAAGGTGAAGCGATGCTTACCGCCCTCACCCATCTTAGCCGTTCGCCGCTGGAGCAAAATATCATTCAGCCGCTGGTGTTAAGTTTGCTGCATCTTTGCCGTAGCGTGGTGAATATGCCGCCGGGCAATTCGCAGCCGCGCGGCGATTTTCTCTATCACAGCATTTGTAACTGGGTTCAGGATAATTATGCCCAGCCGCTCACCCGCGAGAGCGTGGCGCAGTTTTTTAATATCACGCCCAATCATCTGTCAAAACTGTTTGCTCAGCATGGAACGATGCGTTTTATCGAGTATGTGCGTTGGGTGCGAATGGCGAAGGCGAGGATGATTTTGCAGAAATATCATCTGTCAATTCATGAAGTGGCACAGCGTTGCGGTTTTCCGGATAGCGACTATTTTTGTCGCGTTTTCCGGCGTCAGTTTGGTCTGACGCCGGGAGAGTACAGCGCCCGTTTTCAGGGCTAA", - "dna_sequence_length": 858, - "functions": [ - "putative DNA-binding protein" - ], - "id": "CDS_2368", - "location": [ - [ - "NC_000913", - 2501130, - "+", - 858 - ] - ], - "md5": "b5ebd694f1f1a49d56b04cf51c1bbf72", - "parent_gene": "", - "protein_md5": "0609a0a5c9d4527db1bd643c118e9fd1", - "protein_translation": "MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPRLDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFAPTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTRESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG", - "protein_translation_length": 285, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007861" - ], - [ - "gene_synonym", - "b2383" - ], - [ - "gene_synonym", - "EcoGene:EG14151" - ], - [ - "gene_synonym", - "fryA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77439" - ], - [ - "gene_synonym", - "GeneID:946852" - ], - [ - "gene_synonym", - "JW2380" - ], - [ - "gene_synonym", - "ECK2379" - ], - [ - "gene_synonym", - "GI:16130315" - ], - [ - "gene_synonym", - "NP_416884.1" - ], - [ - "gene_synonym", - "ypdD" - ] - ], - "dna_sequence": "ATGTTAACGATTCAATTTCTCTGTCCTTTGCCTAACGGTCTACATGCTCGTCCGGCGTGGGAACTTAAAGAACAGTGCAGCCAGTGGCAAAGCGAAATCACTTTTATTAACCATCGCCAGAACGCAAAGGCAGATGCGAAAAGCTCGCTGGCGCTGATTGGCACCGGCACCCTATTTAATGACAGTTGCAGCCTGAACATTAGCGGCAGCGATGAAGAGCAGGCGCGGCGCGTGCTGGAAGAGTACATCCAGGTGCGCTTTATCGACAGCGACAGCGTTCAGCCTACGCAGGCAGAACTGACGGCGCATCCGCTGCCGCGTTCATTAAGCCGCCTTAACCCGGATTTACTGTACGGCAATGTGCTGGCAAGCGGCGTCGGCGTGGGTACGCTGACCCTGTTACAAAGCGACAGCCTCGACAGTTATCGGGCAATCCCCGCCAGTGCGCAAGATTCCACCCGGCTGGAGCACAGCCTGGCAACGCTTGCCGAGCAACTGAACCAGCAATTGCGTGAGCGTGACGGCGAAAGCAAAACTATCCTCAGCGCCCATTTGTCGCTGATTCAGGATGATGAATTTGCAGGCAATATCCGTCGCCTGATGACAGAACAGCATCAGGGGCTGGGGGCGGCGATCATCAGCAATATGGAGCAGGTTTGCGCCAAACTTTCTGCCTCTGCCAGCGATTATCTGCGCGAACGTGTTAGCGACATTCGCGATATCAGCGAACAGTTGCTGCATATCACCTGGCCGGAACTGAAGCCGCGCAACAAGCTGGTGCTTGAAAAACCGACCATTCTGGTGGCTGAAGATTTAACCCCAAGCCAGTTTTTGAGCCTTGATTTGAAAAATCTTGCGGGCATGATTCTGGAGAAAACCGGGCGCACCTCGCATACACTGATTCTGGCCCGTGCCTCGGCGATCCCGGTACTGAGTGGCTTGCCGCTGGATGCGATTGCCCGTTATGCCGGGCAACCTGCAGTGCTTGACGCCCAGTGCGGCGTGCTGGCGATTAACCCGAATGACGCGGTGAGCGGTTATTATCAGGTCGCGCAGACGCTGGCGGATAAACGCCAAAAACAACAGGCGCAGGCTGCCGCGCAGCTGGCCTATTCCCGTGATAACAAGCGTATTGATATTGCGGCGAATATCGGCACCGCTCTGGAAGCGCCAGGCGCGTTTGCCAACGGCGCGGAAGGTGTCGGGCTGTTCCGTACCGAAATGCTCTATATGGATCGCGACAGCGCGCCGGACGAGCAGGAGCAATTTGAAGCCTACCAGCAGGTGCTACTGGCGGCGGGCGACAAGCCGATTATCTTCCGCACGATGGACATCGGCGGCGATAAAAGCATTCCTTATCTGAATATTCCCCAGGAAGAGAACCCGTTCCTCGGCTATCGCGCGGTACGTATTTACCCGGAATTTGCTGGCCTGTTCCGCACTCAACTGCGGGCCATTTTGCGCGCCGCCAGTTTCGGCAACGCCCAGTTGATGATCCCGATGGTTCACAGCCTCGATCAGATCTTATGGGTGAAAGGCGAGATCCAAAAAGCGATCGTTGAGCTTAAGCGCGATGGCCTGCGTCATGCAGAGACGATTACGCTTGGGATCATGGTGGAAGTTCCGTCGGTGTGCTACATCATCGACCACTTCTGCGATGAGGTCGATTTCTTCAGTATCGGCTCCAACGATATGACCCAGTATCTGTATGCGGTCGATCGTAATAACCCGCGCGTATCGCCGCTATATAACCCGATTACGCCATCGTTCCTGCGCATGTTGCAGCAAATAGTTACCACTGCGCATCAGCGGGGCAAATGGGTAGGCATTTGCGGTGAACTGGGCGGTGAAAGCCGTTATCTGCCGCTACTGCTTGGGCTGGGCCTGGATGAGCTGAGTATGAGTAGCCCGCGTATTCCGGCGGTGAAAAGCCAGCTTCGTCAACTGGATAGCGAGGCGTGTCGGGAACTGGCGCGTCAGGCATGTGAATGCCGCAGTGCGCAGGAAATTGAAGCGTTACTCACCGCCTTTACGCCGGAAGAAGACGTTCGCCCACTGCTGGCGCTGGAGAATATCTTTGTTGATCAGGATTTTAGCAATAAAGAGCAGGCGATCCAGTTCCTGTGCGGCAACCTCGGCGTTAACGGGCGCACTGAACATCCGTTTGAGCTGGAAGAAGATGTCTGGCAGCGGGAAGAGATTGTTACCACCGGCGTTGGTTTTGGCGTAGCGATCCCGCACACCAAATCTCAGTGGATCCGTCATTCCAGTATCAGCATTGCCCGGCTGGCGAAACCGATTGGCTGGCAGTCAGAAATGGGCGAAGTCGAACTGGTGATCATGCTGACGCTGGGTGCTAACGAAGGGATGAATCATGTGAAAGTCTTCTCGCAGCTGGCGCGTAAACTGGTGAATAAAAACTTCCGCCAGTCGTTGTTTGCCGCGCAAGATGCACAAAGTATCCTGACGCTGCTGGAAACAGAATTAACCTTCTGA", 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"MLTIQFLCPLPNGLHARPAWELKEQCSQWQSEITFINHRQNAKADAKSSLALIGTGTLFNDSCSLNISGSDEEQARRVLEEYIQVRFIDSDSVQPTQAELTAHPLPRSLSRLNPDLLYGNVLASGVGVGTLTLLQSDSLDSYRAIPASAQDSTRLEHSLATLAEQLNQQLRERDGESKTILSAHLSLIQDDEFAGNIRRLMTEQHQGLGAAIISNMEQVCAKLSASASDYLRERVSDIRDISEQLLHITWPELKPRNKLVLEKPTILVAEDLTPSQFLSLDLKNLAGMILEKTGRTSHTLILARASAIPVLSGLPLDAIARYAGQPAVLDAQCGVLAINPNDAVSGYYQVAQTLADKRQKQQAQAAAQLAYSRDNKRIDIAANIGTALEAPGAFANGAEGVGLFRTEMLYMDRDSAPDEQEQFEAYQQVLLAAGDKPIIFRTMDIGGDKSIPYLNIPQEENPFLGYRAVRIYPEFAGLFRTQLRAILRAASFGNAQLMIPMVHSLDQILWVKGEIQKAIVELKRDGLRHAETITLGIMVEVPSVCYIIDHFCDEVDFFSIGSNDMTQYLYAVDRNNPRVSPLYNPITPSFLRMLQQIVTTAHQRGKWVGICGELGGESRYLPLLLGLGLDELSMSSPRIPAVKSQLRQLDSEACRELARQACECRSAQEIEALLTAFTPEEDVRPLLALENIFVDQDFSNKEQAIQFLCGNLGVNGRTEHPFELEEDVWQREEIVTTGVGFGVAIPHTKSQWIRHSSISIARLAKPIGWQSEMGEVELVIMLTLGANEGMNHVKVFSQLARKLVNKNFRQSLFAAQDAQSILTLLETELTF", - "protein_translation_length": 831, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2380" - ], - [ - "gene_synonym", - "ASAP:ABE-0007864" - ], - [ - "gene_synonym", - "NP_416885.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77585" - ], - [ - "gene_synonym", - "b2384" - ], - [ - "gene_synonym", - "EcoGene:EG14152" - ], - [ - "gene_synonym", - "GeneID:946848" - ], - [ - "gene_synonym", - "JW2381" - ], - [ - "gene_synonym", - "GI:16130316" - ], - [ - "gene_synonym", - "ypdE" - ] - ], - "dna_sequence": "ATGGATTTATCGCTATTAAAAGCGTTGAGCGAGGCAGATGCGATCGCCTCCTCGGAACAGGAAGTGCGGCAGATCCTGCTGGAAGAAGCGGATCGCCTGCAAAAAGAAGTGCGATTTGATGGTCTGGGATCGGTGCTGATCCGCCTGAATGAATCGACAGGTCCGAAGGTGATGATCTGTGCGCATATGGACGAAGTGGGATTTATGGTGCGCAGCATCTCCCGCGAAGGGGCGATTGATGTGCTGCCGGTTGGCAACGTACGCATGGCTGCCCGCCAGCTGCAGCCGGTGCGCATCACCACCCGTGAAGAGTGCAAAATTCCAGGCCTGCTTGACGGCGACCGGCAGGGGAATGACGTCAGCGCCATGCGCGTGGACATTGGTGCGCGCTCCTATGACGAAGTGATGCAGGCGGGAATTCGTCCCGGCGATCGCGTCACGTTTGATACCACTTTTCAGGTTCTCCCTCACCAGCGAGTGATGGGGAAAGCCTTTGATGACCGCCTCGGTTGCTATCTGCTGGTGACGTTACTGCGCGAACTGCACGACGCCGAACTACCTGCGGAAGTGTGGCTGGTGGCAAGTTCCAGCGAAGAGGTGGGATTACGCGGCGGGCAAACTGCCACCCGCGCGGTGTCGCCGGACGTCGCCATTGTGCTTGATACCGCCTGCTGGGCGAAAAACTTTGATTATGGCGCGGCTAACCATCGCCAGATTGGTAACGGGCCGATGCTGGTGTTAAGCGACAAGTCGCTGATTGCGCCGCCAAAACTTACCGCCTGGGTCGAAACCGTGGCGGCAGAAATTGGCGTGCCGTTGCAGGCAGATATGTTCAGCAACGGCGGCACGGACGGCGGGGCGGTGCACTTAACCGGCACCGGCGTGCCCACAGTGGTGATGGGGCCAGCAACCCGCCATGGACATTGCGCCGCATCGATTGCCGATTGCCGCGACATTTTGCAGATGCAGCAACTTTTATCTGCCCTTATTCAACGTCTTACGCGTGAGACGGTTGTTCAACTGACGGATTTCAGATGA", - "dna_sequence_length": 1038, - "functions": [ - "aminopeptidase" - ], - "id": "CDS_2370", - "location": [ - [ - "NC_000913", - 2505547, - "-", - 1038 - ] - ], - "md5": "68b43d84f02536cda7bf83e2ed2aad28", - "parent_gene": "", - "protein_md5": "176aaf7d445abb94a9a16fda6a9386c9", - "protein_translation": "MDLSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFDGLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRLGCYLLVTLLRELHDAELPAEVWLVASSSEEVGLRGGQTATRAVSPDVAIVLDTACWAKNFDYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWVETVAAEIGVPLQADMFSNGGTDGGAVHLTGTGVPTVVMGPATRHGHCAASIADCRDILQMQQLLSALIQRLTRETVVQLTDFR", - "protein_translation_length": 345, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2381" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76524" - ], - [ - "gene_synonym", - "NP_416886.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007869" - ], - [ - "gene_synonym", - "b2385" - ], - [ - "gene_synonym", - "JW2382" - ], - [ - "gene_synonym", - "EcoGene:EG14153" - ], - [ - "gene_synonym", - "GeneID:946853" - ], - [ - "gene_synonym", - "GI:16130317" - ], - [ - "gene_synonym", - "ypdF" - ] - ], - "dna_sequence": "ATGACATTACTCGCTTCGCTGCGCGACTGGCTTAAGGCGCAACAACTGGATGCAGTGCTTCTCTCCTCACGGCAGAACAAACAGCCGCATCTGGGGATCTCCACCGGATCAGGTTATGTGGTGATTAGCCGTGAAAGTGCGCACATTCTGGTGGATTCGCGCTATTACGTTGAGGTGGAAGCCCGTGCGCAAGGCTACCAGCTGCATTTGCTTGACGCGACGAACACGCTTACCACTATCGTCAATCAAATCATTGCCGATGAACAGTTGCAAACGCTCGGTTTTGAGGGCCAGCAGGTGAGTTGGGAAACCGCGCACCGCTGGCAGTCTGAACTCAATGCGAAACTGGTTAGCGCCACGCCGGATGTGCTGCGGCAAATCAAAACGCCAGAGGAGGTGGAGAAAATCCGCCTCGCCTGTGGGATTGCTGATCGCGGTGCAGAGCATATTCGCCGCTTTATTCAGGCGGGGATGAGCGAGCGCGAGATAGCCGCTGAACTGGAGTGGTTTATGCGCCAGCAGGGCGCAGAAAAAGCCTCTTTTGACACCATTGTCGCCAGTGGCTGGCGTGGGGCGCTGCCGCACGGCAAAGCCAGCGACAAGATTGTTGCAGCGGGCGAGTTTGTCACTCTCGATTTCGGTGCGCTGTATCAGGGCTACTGCTCTGATATGACGCGCACCTTGCTGGTGAATGGCGAAGGGGTGAGCGCCGAATCTCACCTGCTGTTTAACGTCTATCAAATTGTCCTGCAGGCACAGCTCGCAGCAATCTCCGCGATTCGCCCCGGCGTGCGCTGCCAGCAGGTTGACGATGCCGCGCGCCGGGTCATTACAGAAGCAGGTTATGGCGACTATTTCGGTCATAACACCGGTCACGCTATCGGCATTGAAGTTCATGAAGATCCGCGTTTTTCACCGCGGGACACCACGACGCTACAGCCAGGCATGTTACTGACCGTGGAGCCGGGGATTTATTTGCCAGGGCAAGGGGGCGTGCGCATCGAAGATGTTGTGCTGGTTACCCCGCAAGGCGCAGAAGTGCTCTACGCCATGCCGAAAACAGTGTTGCTCACGGGAGAGGCATAA", - "dna_sequence_length": 1086, - "functions": [ - "Xaa-Pro aminopeptidase" - ], - "id": "CDS_2371", - "location": [ - [ - "NC_000913", - 2506632, - "-", - 1086 - ] - ], - "md5": "78abff806e4594e4be424208dea94815", - "parent_gene": "", - "protein_md5": "c50d78260613034cae969ee7117277cd", - "protein_translation": "MTLLASLRDWLKAQQLDAVLLSSRQNKQPHLGISTGSGYVVISRESAHILVDSRYYVEVEARAQGYQLHLLDATNTLTTIVNQIIADEQLQTLGFEGQQVSWETAHRWQSELNAKLVSATPDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEKASFDTIVASGWRGALPHGKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHLLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHNTGHAIGIEVHEDPRFSPRDTTTLQPGMLLTVEPGIYLPGQGGVRIEDVVLVTPQGAEVLYAMPKTVLLTGEA", - "protein_translation_length": 361, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2382" - ], - [ - "gene_synonym", - "ASAP:ABE-0007871" - ], - [ - "gene_synonym", - "fryC" - ], - [ - "gene_synonym", - "b2386" - ], - [ - "gene_synonym", - "GeneID:949111" - ], - [ - "gene_synonym", - "EcoGene:EG14154" - ], - [ - "gene_synonym", - "GI:16130318" - ], - [ - "gene_synonym", - "JW2383" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77579" - ], - [ - "gene_synonym", - "ypdG" - ], - [ - "gene_synonym", - "NP_416887.1" - ] - ], - "dna_sequence": "ATGGCCATTAAAAAACGCAGTGCAACCGTTGTGCCTGGCGCATCCGGTGCGGCAGCGGCAGTTAAGAATCCGCAGGCCTCTAAAACCAGCTTCTGGGGTGAACTCCCGCAGCATGTGATGTCAGGGATTTCACGCATGGTGCCGACCTTAATTATGGGCGGTGTGATCCTCGCTTTCAGCCAGCTGATTGCTTATAGCTGGCTTAAAATTCCTGCTGAGATCGGCATCATGGATGCTCTTAATAGCGGGAAATTCTCCGGTTTCGACCTCTCCTTACTTAAATTTGCCTGGCTGTCGCAGTCCTTCGGCGGCGTGTTGTTTGGTTTTGCCATTCCGATGTTTGCTGCTTTTGTGGCGAACTCTATCGGTGGCAAACTGGCGTTCCCGGCTGGTTTTATCGGCGGGTTGATGTCTACCCAGCCGACGCAACTGCTGAACTTCGATCCCAGCACTATGCAATGGGCGACCTCTTCGCCGGTGCCGTCCACCTTCATTGGTGCGCTGATTATTTCTATCGTTGCCGGTTACCTTGTGAAGTGGATGAACCAGAAAATCCAGTTACCGGATTTCCTGTTAGCGTTCAAAACCACATTTTTGCTCCCGATTCTTTCCGCCATTTTTGTCATGCTGGCGATGTACTACGTCATCACCCCCTTTGGTGGCTGGATCAACGGCGGTATCCGTACTGTGCTGACTGCCGCAGGTGAGAAGGGCGCGCTGATGTACGCAATGGGGATCGCCGCGGCGACAGCAATCGACCTTGGTGGCCCGATCAACAAAGCCGCAGGTTTTGTTGCCTTCAGCTTTACCACTGACCACGTATTACCGGTCACCGCTCGTTCTATCGCTATCGTTATTCCGCCGATTGGTCTGGGGCTGGCGACCATTATCGACCGTCGTTTAACCGGCAAACGCCTGTTCAACGCTCAACTTTATCCGCAGGGTAAGACCGCCATGTTCCTGGCGTTTATGGGGATCAGTGAGGGTGCGATTCCGTTTGCGCTGGAAAGCCCCATCACCGCCATTCCGTCGTATATGGTCGGCGCTATTGTCGGCTCAACCGCCGCTGTCTGGCTGGGCGCAGTGCAATGGTTCCCGGAGTCCGCTATCTGGGCATGGCCGCTGGTCACTAACCTGGGCGTCTATATGGCGGGGATCGCGCTGGGGGCAGTCATAACTGCGCTGATGGTGGTGTTCCTGCGTCTGATGATGTTCCGTAAAGGCAAATTGTTAATCGATAGCCTGTAA", - "dna_sequence_length": 1248, - "functions": [ - "putative enzyme IIC component of PTS" - ], - "id": "CDS_2372", - "location": [ - [ - "NC_000913", - 2507894, - "-", - 1248 - ] - ], - "md5": "5fbaa819b0bd8028cccbe6b4c251632e", - "parent_gene": "", - "protein_md5": "36a73a61f0358e2200cbfc41b35bd78e", - "protein_translation": "MAIKKRSATVVPGASGAAAAVKNPQASKTSFWGELPQHVMSGISRMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSFGGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPVPSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITPFGGWINGGIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLPVTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFALESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAVITALMVVFLRLMMFRKGKLLIDSL", - "protein_translation_length": 415, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2383" - ], - [ - "gene_synonym", - "GeneID:949087" - ], - [ - "gene_synonym", - "JW5389" - ], - [ - "gene_synonym", - "ASAP:ABE-0007873" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69808" - ], - [ - "gene_synonym", - "fryB" - ], - [ - "gene_synonym", - "b2387" - ], - [ - "gene_synonym", - "ypdH" - ], - [ - "gene_synonym", - "GI:16130319" - ], - [ - "gene_synonym", - "EcoGene:EG14155" - ], - [ - "gene_synonym", - "NP_416888.1" - ] - ], - "dna_sequence": "ATGAGTAAGAAACTGATTGCCTTATGTGCCTGCCCGATGGGCCTGGCTCACACCTTTATGGCCGCTCAGGCGCTGGAAGAAGCGGCGGTAGAAGCCGGTTATGAAGTGAAAATTGAAACCCAGGGCGCGGACGGTATCCAGAATCGCCTGACGGCGCAGGATATCGCCGAAGCGACCATCATCATCCACTCCGTGGCAGTTACCCCGGAAGATAACGAACGTTTCGAATCACGCGACGTTTATGAAATCACTTTGCAGGACGCAATTAAAAACGCTGCGGGCATCATCAAAGAAATCGAAGAGATGATTGCCTCTGAACAACAGTAA", - "dna_sequence_length": 327, - "functions": [ - "putative enzyme IIB component of PTS" - ], - "id": "CDS_2373", - "location": [ - [ - "NC_000913", - 2508242, - "-", - 327 - ] - ], - "md5": "06289b078ea846a988bb419ef7e740cf", - "parent_gene": "", - "protein_md5": "ffdb15eded2cbc4a89b6e9ece42b30e9", - "protein_translation": "MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEMIASEQQ", - "protein_translation_length": 108, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007875" - ], - [ - "gene_synonym", - "b2388" - ], - [ - "gene_synonym", - "glk" - ], - [ - "gene_synonym", - "ECK2384" - ], - [ - "gene_synonym", - "EcoGene:EG12957" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6V8" - ], - [ - "gene_synonym", - "GI:16130320" - ], - [ - "gene_synonym", - "JW2385" - ], - [ - "gene_synonym", - "NP_416889.1" - ], - [ - "gene_synonym", - "GeneID:946858" - ] - ], - "dna_sequence": "ATGACAAAGTATGCATTAGTCGGTGATGTGGGCGGCACCAACGCACGTCTTGCTCTGTGTGATATTGCCAGTGGTGAAATCTCGCAGGCTAAGACCTATTCAGGGCTTGATTACCCCAGCCTCGAAGCGGTCATTCGCGTTTATCTTGAAGAACATAAGGTCGAGGTGAAAGACGGCTGTATTGCCATCGCTTGCCCAATTACCGGTGACTGGGTGGCGATGACCAACCATACCTGGGCGTTCTCAATTGCCGAAATGAAAAAGAATCTCGGTTTTAGCCATCTGGAAATTATTAACGATTTTACCGCTGTATCGATGGCGATCCCGATGCTGAAAAAAGAGCATCTGATTCAGTTTGGTGGCGCAGAACCGGTCGAAGGTAAGCCTATTGCGGTTTACGGTGCCGGAACGGGGCTTGGGGTTGCGCATCTGGTCCATGTCGATAAGCGTTGGGTAAGCTTGCCAGGCGAAGGCGGTCACGTTGATTTTGCGCCGAATAGTGAAGAAGAGGCCATTATCCTCGAAATATTGCGTGCGGAAATTGGTCATGTTTCGGCGGAGCGCGTGCTTTCTGGCCCTGGGCTGGTGAATTTGTATCGCGCAATTGTGAAAGCTGACAACCGCCTGCCAGAAAATCTCAAGCCAAAAGATATTACCGAACGCGCGCTGGCTGACAGCTGCACCGATTGCCGCCGCGCATTGTCGCTGTTTTGCGTCATTATGGGCCGTTTTGGCGGCAATCTGGCGCTCAATCTCGGGACATTTGGCGGCGTGTTTATTGCGGGCGGTATCGTGCCGCGCTTCCTTGAGTTCTTCAAAGCCTCCGGTTTCCGTGCCGCATTTGAAGATAAAGGGCGCTTTAAAGAATATGTCCATGATATTCCGGTGTATCTCATCGTCCATGACAATCCGGGCCTTCTCGGTTCCGGTGCACATTTACGCCAGACCTTAGGTCACATTCTGTAA", - "dna_sequence_length": 966, 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- ], - [ - "gene_synonym", - "NP_416890.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67729" - ] - ], - "dna_sequence": "ATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGCCGTGGCAATTGGGATTGCGTCCAGTCTTATTCTGATTGTGGTGATGAAAATCGCCTCGGTATTACAGAATTTGCTCTGGCAACGACTGCCGGGAACTCTGGGGATAGCCCAGGATTCACCCCTCTGGATCATCGGTGTATTAACGCTAACGGGTATTGCGGTGGGGTTGGTTATCCGTTTCAGCCAGGGTCATGCCGGACCAGACCCCGCCTGTGAACCGCTGATCGGCGCACCGGTTCCGCCCTCTGCGCTACCTGGACTTATCGTAGCATTAATTCTCGGTCTTGCTGGCGGCGTCAGCCTGGGGCCGGAACATCCGATCATGACCGTCAATATCGCCCTTGCGGTTGCCATTGGCGCTCGTCTGTTACCGCGCGTCAACCGAATGGAGTGGACTATTTTAGCCTCTGCCGGAACCATCGGCGCACTGTTTGGCACTCCTGTTGCGGCGGCGTTGATATTTTCGCAAACCTTAAATGGCAGTAGTGAAGTTCCGCTATGGGATCGTCTCTTTGCGCCGTTAATGGCGGCAGCAGCTGGTGCACTTACTACCGGATTATTTTTCCATCCTCATTTTTCACTGCCCATTGCTCATTACGGACAGATGGAAATGACCGATATTCTCAGCGGTGCAATTGTCGCGGCGATTGCCATCGCAGCAGGGATGGTCGCCGTATGGTGCTTACCACGGTTGCACGCGATGATGCATCAAATGAAAAATCCGGTGCTCGTGCTGGGTATTGGCGGATTTATTCTCGGTATTCTGGGGGTTATTGGTGGACCAGTTTCGCTGTTTAAAGGGCTGGATGAGATGCAGCAGATGGTGGCAAATCAGGCTTTCAGCACCAGCGATTACTTTTTGCTGGCGGTAATTAAACTTGCCGCCCTGGTCGTTGCTGCCGCCAGTGGCTTTCGCGGTGGGCGAATCTTCCCGGCAGTGTTTGTCGGCGTGGCATTAGGGTTGATGCTGCATGAGCACGTTCCCGCCGTACCAGCGGCAATAACCGTTTCTTGCGCTATTCTCGGCATCGTGCTGGTGGTAACACGCGATGGCTGGTTAAGTCTTTTTATGGCGGCAGTCGTTGTACCCAATACCACATTGCTACCGCTGCTCTGTATCGTCATGCTTCCGGCATGGCTGTTATTAGCAGGTAAGCCGATGATGATGGTCAATCGTCCGAAGCAACAGCCACCCCACGATAACGTTTAG", 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"gene_synonym", - "ASAP:ABE-0007883" - ], - [ - "gene_synonym", - "NP_416891.1" - ], - [ - "gene_synonym", - "JW2387" - ], - [ - "gene_synonym", - "GI:16130322" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64542" - ], - [ - "gene_synonym", - "ypeC" - ] - ], - "dna_sequence": "ATGTTCAGGTCACTGTTTCTGGCGGCCGCCCTGATGGCATTTACCCCGCTTGCAGCAAACGCAGGTGAAATCACCCTACTGCCATCAATCAAATTACAAATTGGCGATCGCGATCATTACGGTAATTACTGGGACGGTGGTCACTGGCGCGACCGTGACTACTGGCATCGCAATTATGAGTGGCGCAAAAACCGTTGGTGGCGTCATGATAATGGCTACCACCGTGGCTGGGATAAGCGTAAAGCGTATGAGCGTGGCTATCGTGAAGGCTGGCGCGATCGTGACGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAA", - "dna_sequence_length": 327, - "functions": [ - "DUF2502 family putative periplasmic protein" - ], - "id": "CDS_2376", - "location": [ - [ - "NC_000913", - 2511001, - "+", - 327 - ] - ], - "md5": "ac60b5ed3c6cc2f127df6836155f39a8", - "parent_gene": "", - "protein_md5": "46b03e93eba98dbcb2c9463dcc4d52a9", - "protein_translation": "MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGKGRGHGHRH", - "protein_translation_length": 108, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007889" - ], - [ - "gene_synonym", - "mntH" - ], - [ - "gene_synonym", - "NP_416893.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A769" - ], - [ - "gene_synonym", - "ECK2387" - ], - [ - "gene_synonym", - "mntA" - ], - [ - "gene_synonym", - "GeneID:946899" - ], - [ - "gene_synonym", - "b2392" - ], - [ - "gene_synonym", - "EcoGene:EG14157" - ], - [ - "gene_synonym", - "yfeP" - ], - [ - "gene_synonym", - "GI:16130324" - ], - [ - "gene_synonym", - "JW2388" - ] - ], - "dna_sequence": "ATGACGAACTATCGCGTTGAGAGTAGCAGCGGACGGGCGGCGCGCAAGATGAGGCTCGCATTAATGGGACCTGCGTTCATTGCGGCGATTGGTTATATCGATCCCGGTAACTTTGCGACCAATATTCAGGCGGGTGCTAGCTTCGGCTATCAGCTACTGTGGGTTGTCGTTTGGGCCAACCTGATGGCGATGCTGATTCAGATCCTCTCTGCCAAACTAGGGATTGCCACCGGTAAAAATCTGGCGGAGCAGATTCGCGATCACTATCCGCGTCCCGTAGTGTGGTTCTATTGGGTTCAGGCAGAAATTATTGCGATGGCAACCGACCTGGCGGAATTTATTGGTGCGGCGATCGGTTTTAAACTCATTCTTGGTGTTTCGTTGTTGCAGGGCGCGGTGCTGACGGGGATCGCGACTTTCCTGATTTTAATGCTGCAACGTCGCGGGCAAAAACCGCTGGAGAAAGTGATTGGCGGGTTACTGTTGTTTGTTGCCGCGGCTTACATTGTCGAGTTGATTTTCTCCCAGCCTAACCTGGCGCAGCTGGGTAAAGGAATGGTGATCCCGAGTTTACCTACTTCGGAAGCGGTCTTCCTGGCAGCAGGCGTGTTAGGGGCGACGATTATGCCGCATGTGATTTATTTGCACTCCTCGCTCACTCAGCATTTACATGGCGGTTCGCGTCAACAACGTTATTCCGCCACCAAATGGGATGTGGCTATCGCCATGACTATTGCCGGTTTTGTCAATCTGGCGATGATGGCTACAGCTGCGGCGGCGTTCCACTTTTCCGGTCATACTGGTGTTGCCGATCTTGATGAGGCTTATCTGACGCTGCAACCGCTGTTAAGCCACGCTGCGGCAACGGTCTTTGGATTAAGCCTGGTTGCTGCGGGGCTGTCTTCAACGGTGGTGGGGACACTGGCGGGGCAGGTGGTGATGCAGGGCTTCATTCGCTTTCATATCCCGCTGTGGGTGCGTCGTACAGTCACCATGTTGCCGTCATTTATTGTCATTCTGATGGGATTAGATCCGACACGGATTCTGGTTATGAGTCAGGTACTGTTAAGTTTTGGTATCGCTCTGGCGCTGGTTCCACTGCTGATTTTCACCAGTGACAGCAAGTTGATGGGCGATCTGGTGAACAGCAAACGCGTAAAACAGACAGGCTGGGTGATTGTGGTGCTGGTCGTGGCGCTGAATATCTGGTTGTTGGTGGGGACGGCGCTGGGATTGTAG", 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- "gene_synonym", - "cru" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFF2" - ], - [ - "gene_synonym", - "ECK2388" - ], - [ - "gene_synonym", - "b2393" - ], - [ - "gene_synonym", - "GI:16130325" - ], - [ - "gene_synonym", - "NP_416894.1" - ], - [ - "gene_synonym", - "JW2389" - ] - ], - "dna_sequence": "ATGGACCGCGTCCTTCATTTTGTACTGGCACTTGCCGTTGTTGCGATTCTCGCACTGCTGGTAAGCAGCGACCGCAAAAAAATTCGTATCCGTTATGTTATTCAACTGCTTGTTATCGAAGTGTTACTGGCGTGGTTCTTCCTGAACTCCGACGTTGGTTTAGGCTTCGTGAAAGGCTTCTCCGAAATGTTCGAAAAACTGCTCGGATTTGCCAACGAAGGGACTAACTTCGTCTTTGGTAGCATGAATGATCAAGGCCTGGCATTCTTCTTCCTGAAAGTGCTGTGCCCAATCGTCTTTATCTCTGCACTGATCGGTATTCTCCAGCACATTCGCGTGTTGCCGGTGATCATCCGCGCAATTGGTTTCCTGCTCTCCAAAGTCAACGGCATGGGCAAACTGGAATCCTTTAACGCCGTCAGCTCCCTGATTCTGGGTCAGTCTGAAAACTTTATTGCCTATAAAGATATCCTCGGCAAAATCTCCCGTAATCGTATGTACACCATGGCTGCCACGGCAATGTCCACCGTGTCGATGTCCATCGTTGGTGCATACATGACCATGCTGGAACCGAAATACGTCGTTGCTGCGCTGGTACTGAACATGTTCAGCACCTTTATCGTGCTGTCGCTGATCAATCCTTACCGTGTTGATGCCAGTGAAGAAAACATCCAGATGTCCAACCTGCACGAAGGTCAGAGCTTCTTCGAAATGCTGGGTGAATACATTCTGGCAGGTTTCAAAGTTGCCATTATCGTTGCCGCGATGCTGATTGGCTTTATCGCCCTGATCGCCGCGCTGAACGCACTGTTTGCCACCGTTACTGGCTGGTTTGGCTACAGCATCTCCTTCCAGGGCATCCTGGGCTACATCTTCTATCCGATTGCATGGGTGATGGGTGTTCCTTCCAGTGAAGCACTGCAAGTGGGCAGTATCATGGCGACCAAACTGGTTTCCAACGAGTTCGTTGCGATGATGGATCTGCAGAAAATTGCTTCCACGCTCTCTCCGCGTGCTGAAGGCATCATCTCTGTGTTCCTGGTTTCCTTCGCTAACTTCTCTTCAATCGGGATTATCGCAGGTGCAGTTAAAGGCCTGAATGAAGAGCAAGGTAACGTGGTTTCTCGCTTCGGTCTGAAGCTGGTTTACGGCTCTACCCTGGTGAGTGTGCTGTCTGCGTCAATCGCAGCACTGGTGCTGTAA", 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- "gene_synonym", - "insL1" - ], - [ - "gene_synonym", - "b2394" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF93" - ], - [ - "gene_synonym", - "ECK0016" - ], - [ - "gene_synonym", - "NP_416895.2" - ] - ], - "dna_sequence": "ATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTGGATACTTCGGCACGTAATGCCGGGGCTCTAACCCGCCGCCGCGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTACGGCCCCGGGGGGATGTCATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCTGAAGCGGCTGCGGAATGCCGCCGACTGGTTTGGCATACTTGCCGCACAAACACTTGCTGTACGCGCCGCAGTTACGGGTTGTACAAGCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATCAGTGCGCCCGGGGGCGGCAGCGCTGAATGGCGACTACATATGGGATATGATCCTCATACCTGTCAGTTCACTGATTTTGAGCTAACCGACAGCAGAGACGCTGAACGGCTGGACCGATTTGCGCAAACGGCAGACGAGATACGCATTGCTGACCGGGGATTCGGTTCGCGTCCCGAATGTATCCGCTCACTTGCTTTTGGAGAAGCTGATTATATCGTCCGGGTTCACTGGCGAGGATTGCGCTGGTTAACTGCAGAAGGAATGCGCTTTGACATGATGGGTTTTCTGCGCGGGCTGGATTGCGGTAAGAACGGTGAAACCACTGTAATGATAGGCAATTCAGGTAATAAAAAAGCCGGAGCTCCCTTTCCGGCACGTCTCATTGCCGTATCACTTCCTCCCGAAAAAGCATTAATCAGTAAAACCCGACTGCTCAGCGAGAATCGTCGAAAAGGACGAGTAGTTCAGGCGGAAACGCTGGAAGCAGCGGGCCATGTGCTATTGCTAACATCATTACCGGAAGATGAATATTCAGCAGAGCAAGTGGCTGATTGTTACCGTCTGCGATGGCAAATTGAACTGGCTTTTAAGCGGCTCAAAAGTTTGCTGCACCTGGATGCTTTGCGTGCAAAGGAACCTGAACTCGCGAAAGCGTGGATATTTGCTAATCTACTCGCCGCATTTTTAATTGACGACATAATCCAGCCATCGCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAA", 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- "gene_synonym", - "NP_416896.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0007899" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23842" - ], - [ - "gene_synonym", - "EcoGene:EG11145" - ] - ], - "dna_sequence": "ATGTTTGTGGAGCATAACCTGATAAAAAATATCAAGATATTCACACTAGCGTTTACGCTCACCGTGGTACTTATTCAGCTATCCCGTTTTATTTCGCCACTTGCCATTATCCATTCCAGTTATATCTTTCTGGCGTGGATGCCACTGTGCGTAATGCTGTCAATCTTGTTTATCTTTGGCTGGCGCGGTGTCGTTCCCGTTTTATGCGGGATGTTTTGCACCAATCTGTGGAACTTTCATCTCTCTTTTTTACAGACTGCGGTCATGCTCGGTAGCCAGACGTTTGTCGTGTTGTGTGCCTGCGCAATATTACGCTGGCAGCTGGGGACGCGTTGGCGTTATGGATTGACCAGCCGATATGTCTGGCAACGTCTGTTCTGGCTTGGTTTGGTGACGCCGATCGGCATCAAATGCAGCATGTATCTTGTGGGGAGCTTCTTTGATTTCCCGCTAAAGATATCCACCTTTTTCGGCGATGCGGATGCCATTTTCACGGTCGTTGATTTGCTAAGCCTTTTCACCGCTGTGCTGATTTACAACATGCTTTTCTACTATCTCACTCGCATGATTGTAAGTCCCCACTTTGCGCAGATATTGTGGCGCAGGGATATCGCTCCGTCGTTGGGCAAAGAGAAACGCGCATTTACCTTAAGCTGGCTGGCAGCGTTAAGCGTGCTGCTACTTCTGTTGTGCACACCTTATGAAAACGACTTTATTGCCGGTTACCTGGTACCCGTTTTCTTCATCATCTTTACCCTCGGGGTCGGTAAGCTTCGCTATCCGTTTTTAAATCTCACCTGGGCTGTTTCAACGCTTTGCCTTCTGAATTACAACCAGAACTTTTTGCAAGGGGTGGAAACCGAATATTCGCTGGCATTTATTCTTGCGGTGCTGATTTCCTTTAGCGTTTGCCTGCTCTATATGGTGCGCATTTATCATCGCAGTGAATGGCTTAATCGCCGCTGGCATTTGCAGGCGCTGACAGATCCGTTAACGCTCCTACCCAACTTTCGTGCGTTGGAACAAGCGCCGGAGCAAGAGGCGGGCAAGAGTTTTTGCTGCCTGCGCATTGATAATCTTGAGTTTATGAGTCGTCATTACGGCTTAATGATGCGCGTTCACTGTATCCGCTCAATTTGCCGTACGCTGCTGCCGTTGATGCAGGAAAACGAAAAGTTGTATCAATTGCCGGGTAGTGAACTGCTGTTAGTGCTGAGCGGGCCGGAAACGGAAGGGCGACTCCAGCATATGGTTAACATCCTGAATAGTCGGCAAATTCACTGGAACAATACCGGGCTGGATATGGGCTATGGTGCTGCCTGGGGGCGTTTTGATGGAAATCAGGAAACCCTGCAACCCTTGTTGGGGCAGTTAAGCTGGCTGGCGGAGCAATCCTGCGCACATCATCATGTGCTGGCGCTGGATAGCAGAGAGGAGATGGTTTCCGGGCAGACCACTAAACAGGTGCTATTGCTGAATACCATTCGCACGGCGTTAGATCAGGGTGATTTGCTGCTCTACGCCCAGCCAATTCGCAACAAAGAGGGTGAAGGTTATGATGAGATCCTCGCGCGACTGAAATATGACGGCGGCATTATGACCCCGGATAAGTTTCTGCCCCTTATTGCTCAGTTTAACCTTAGCGCGCGTTTTGATTTGCAAGTGCTGGAATCCTTGTTGAAGTGGCTGGCAACACACCCTTGCGACAAAAAAGGACCGCGCTTTTCAGTCAATTTAATGCCGCTCACGCTGCTGCAAAAGAATATTGCCGGGCGGATTATTCGTCTGTTTAAGCGTTATCACATCTCCCCGCAGGCGGTCATTCTTGAGATCACCGAGGAGCAGGCGTTTTCTAACGCAGAAAGCAGCATGTACAACATCGAGCAGCTGCATAAGTTTGGTTTCCGGATTGCGATTGATGACTTTGGCACCGGATATGCCAACTACGAACGGTTAAAGCGTTTGCAGGCTGATATCATCAAAATTGATGGCGTCTTTGTGAAAGATATTGTCACGAACACGCTGGATGCGATGATTGTGAGATCAATTACCGATCTGGCGAAAGCGAAGTCATTGAGTGTGGTCGCGGAGTTTGTCGAGACGCAACAGCAGCAGGCGCTATTGCATAAGCTCGGGGTGCAATATCTGCAAGGGTATTTGATTGGTCGCCCGCAGCCATTAGCTGATTAA", 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"MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFLAWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACAILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDADAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLSWLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLNYNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLLPNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEKLYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQETLQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYAQPIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATHPCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSMYNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRSITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD", - "protein_translation_length": 729, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfeC" - ], - [ - "gene_synonym", - "GI:90111429" - ], - [ - "gene_synonym", - "b2398" - ], - [ - "gene_synonym", - "ECK2392" - ], - [ - "gene_synonym", - "NP_416897.2" - ], - [ - "gene_synonym", - "EcoGene:EG11431" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD37" - ], - [ - "gene_synonym", - "GeneID:946857" - ], - [ - "gene_synonym", - "JW2393" - ], - [ - "gene_synonym", - "ASAP:ABE-0007907" - ] - ], - "dna_sequence": "ATGACACCAGATGAACTTGCCAGACTGACCGGCTATAGCCGCCAGACCATTAATAAATGGGTACGCAAGGAAGGCTGGACAACGTCACCAAAACCTGGCGTCCAGGGTGGCAAAGCCCGACTGGTTCACGTCAATGAACAGGTTCGTGAATATATTCGCAATGCTGAACGTCCAGAAGGTCAGGGAGAAGCGCCTGCCCTTTCTGGTGATGCGCCGCTTGAAGTATTGCTGGTGACACTGGCGAAAGAGATGACGCCAGTTGAACAAAAACAGTTTACATCCTTGCTTCTGCGGGAAGGGATTATCGGATTGTTACAACGCTTAGGGATTCGCGATAGCAAATAA", - "dna_sequence_length": 345, - "functions": [ - "DUF1323 family putative DNA-binding protein" - ], - "id": "CDS_2381", - "location": [ - [ - "NC_000913", - 2518467, - "+", - 345 - ] - ], - "md5": "2f045538fc5360a4f6afa0ce07566d55", - "parent_gene": "", - "protein_md5": "4cc6367ba3526a3be10334ec7067599c", - "protein_translation": "MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHVNEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGIIGLLQRLGIRDSK", - "protein_translation_length": 114, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2399" - ], - [ - "gene_synonym", - "yfeD" - ], - [ - "gene_synonym", - "NP_416898.3" - ], - [ - "gene_synonym", - "GeneID:946865" - ], - [ - "gene_synonym", - "EcoGene:EG11432" - ], - [ - "gene_synonym", - "ECK2393" - ], - [ - "gene_synonym", - "JW2394" - ], - [ - "gene_synonym", - "ASAP:ABE-0007909" - ], - [ - "gene_synonym", - "GI:226524736" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27238" - ] - ], - "dna_sequence": "ATGAAAAGATTACGCAATAAAATGACCACCGAAGAACTGGCTGAATGCCTCGGTGTGGCTAAACAAACTGTTAACCGTTGGATCAGAGAAAAAGGCTGGAAAACGGAAAAATTTCCCGGCGTGAAAGGCGGTCGTGCCAGACTTATTCTGGTCGATACGCAAGTTTGCGAGTTTATTCAGAACACGCCAGCCTTCCATAACACACCAATGTTGATGGAAGCTGAAGAGAGAATTGCTGAATACGCTCCTGGAGCACGCGCCCCGGCGTATCGACAAATCATCAACGCGATAGATAATATGACAGACATTGAGCAGGAAAAAGTCGCGCAATTTTTGTCACGTGAAGGAATTCGCAATTTCCTCGCCCGTCTCGATATTGACGAATCAGCATAA", - "dna_sequence_length": 393, - "functions": [ - "DUF1323 family putative DNA-binding protein" - ], - "id": "CDS_2382", - "location": [ - [ - "NC_000913", - 2518813, - "+", - 393 - ] - ], - "md5": "a07c7f22be6fb2bac4be9416377a63c1", - "parent_gene": "", - "protein_md5": "41032b04170ea48fed1e6276d5892a37", - "protein_translation": "MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILVDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNMTDIEQEKVAQFLSREGIRNFLARLDIDESA", - "protein_translation_length": 130, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "gltX" - ], - [ - "gene_synonym", - "ECK2394" - ], - [ - "gene_synonym", - "b2400" - ], - [ - "gene_synonym", - "JW2395" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04805" - ], - [ - "gene_synonym", - "GeneID:946906" - ], - [ - "gene_synonym", - "GI:16130330" - ], - [ - "gene_synonym", - "NP_416899.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007911" - ], - [ - "gene_synonym", - "EcoGene:EG10407" - ] - ], - "dna_sequence": "ATGAAAATCAAAACTCGCTTCGCGCCAAGCCCAACAGGCTATCTGCACGTTGGCGGCGCGCGTACTGCTCTTTACTCCTGGCTTTTTGCACGTAACCACGGCGGTGAGTTCGTGCTGCGTATTGAAGACACCGATCTTGAGCGTTCCACGCCGGAAGCTATCGAAGCCATTATGGATGGCATGAACTGGCTGAGCCTGGAGTGGGATGAAGGTCCGTACTACCAGACCAAACGTTTTGATCGCTACAACGCGGTGATCGATCAGATGCTGGAAGAGGGCACTGCTTATAAATGCTATTGCTCTAAAGAGCGCCTGGAAGCGCTGCGCGAAGAGCAAATGGCGAAAGGTGAGAAGCCGCGTTATGACGGTCGCTGCCGCCACAGCCATGAGCATCATGCTGATGATGAACCGTGTGTTGTACGTTTTGCTAACCCGCAGGAAGGTTCTGTTGTTTTTGACGATCAGATCCGTGGTCCGATCGAGTTCAGCAACCAGGAACTGGACGATCTTATTATCCGCCGTACCGATGGTTCCCCAACCTATAACTTCTGTGTGGTTGTCGATGACTGGGATATGGAAATCACCCACGTTATCCGTGGCGAAGACCATATCAACAACACGCCACGCCAGATCAACATTCTTAAGGCCCTGAAAGCGCCGGTGCCGGTTTACGCGCACGTTTCTATGATCAATGGCGATGACGGTAAAAAACTGTCCAAACGTCACGGGGCAGTCAGCGTAATGCAGTATCGTGATGACGGTTATTTGCCAGAAGCACTGCTGAACTATCTGGTGCGTCTGGGCTGGTCCCACGGCGATCAGGAAATCTTCACTCGTGAAGAGATGATCAAATACTTCACTTTGAATGCCGTCAGCAAATCTGCCAGTGCGTTCAACACCGACAAGCTGCTGTGGCTGAACCATCACTACATTAACGCGCTGCCGCCGGAGTATGTTGCTACTCACTTACAGTGGCACATTGAGCAGGAAAATATCGATACCCGTAACGGCCCGCAGCTGGCTGATCTGGTGAAACTGCTGGGCGAACGCTGCAAGACGCTGAAAGAGATGGCACAGAGCTGCCGTTATTTCTACGAAGATTTTGCTGAGTTCGATGCCGACGCCGCGAAAAAACATCTGCGTCCGGTAGCGCGTCAGCCGCTGGAAGTGGTTCGTGACAAACTGGCCGCGATTACTGACTGGACCGCTGAAAACGTTCATCACGCTATTCAGGCGACGGCGGATGAGCTGGAAGTGGGTATGGGTAAAGTTGGTATGCCGCTGCGTGTCGCCGTAACCGGTGCGGGGCAGTCTCCAGCACTGGATGTTACCGTTCACGCAATTGGTAAGACCCGCAGTATCGAGCGTATCAACAAAGCGCTGGATTTTATTGCTGAACGCGAAAATCAGCAGTAA", - "dna_sequence_length": 1416, - "functions": [ - "glutamyl-tRNA synthetase" - ], - "id": "CDS_2383", - "location": [ - [ - "NC_000913", - 2520672, - "-", - 1416 - ] - ], - "md5": "994b057934f377c0c080df21723c9c35", - "parent_gene": "", - "protein_md5": "3823599bbfe6a544c24c6b0b0820909c", - "protein_translation": "MKIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDTDLERSTPEAIEAIMDGMNWLSLEWDEGPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSKERLEALREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQEGSVVFDDQIRGPIEFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALKAPVPVYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFTREEMIKYFTLNAVSKSASAFNTDKLLWLNHHYINALPPEYVATHLQWHIEQENIDTRNGPQLADLVKLLGERCKTLKEMAQSCRYFYEDFAEFDADAAKKHLRPVARQPLEVVRDKLAAITDWTAENVHHAIQATADELEVGMGKVGMPLRVAVTGAGQSPALDVTVHAIGKTRSIERINKALDFIAERENQQ", - "protein_translation_length": 471, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfeB" - ], - [ - "gene_synonym", - "pRndR" - ], - [ - "gene_synonym", - "NP_416900.1" - ], - [ - "gene_synonym", - "ECK2399" - ], - [ - "gene_synonym", - "b2405" - ], - [ - "gene_synonym", - "GI:16130331" - ], - [ - "gene_synonym", - "GeneID:946862" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23841" - ], - [ - "gene_synonym", - "EcoGene:EG11146" - ], - [ - "gene_synonym", - "JW2396" - ], - [ - "gene_synonym", - "xapR" - ], - [ - "gene_synonym", - "ASAP:ABE-0007922" - ] - ], - "dna_sequence": "ATGGAACGCGTATACAGAACAGATCTTAAGTTGCTCCGTTATTTTCTTGCCGTAGCGGAAGAGTTGCATTTTGGCCGCGCAGCAGCGCGTTTAAATATGTCTCAGCCTCCGCTCAGCATTCATATTAAAGAGCTGGAAAATCAACTCGGCACGCAGCTTTTTATTCGCCATTCGCGCAGCGTCGTACTGACACACGCGGGCAAAATCTTGATGGAAGAATCGCGTCGATTGCTGGTGAATGCTAATAATGTATTGGCTCGGATTGAACAAATAGGTCGGGGAGAAGCAGGGCGGATTGAACTCGGCGTAGTGGGAACGGCAATGTGGGGACGGATGCGCCCGGTTATGCGGCGATTCCTCAGGGAAAATCCTAACGTTGACGTTCTTTTTCGCGAAAAGATGCCCGCGATGCAAATGGCCTTGCTGGAACGCCGCGAACTTGATGCCGGGATCTGGCGAATGGCGACAGAACCACCGACTGGTTTTACCAGCTTACGGTTGCATGAATCGGCGTTTCTGGTGGCGATGCCTGAAGAGCATCATCTCTCATCATTTTCCACCGTCCCGCTGGAAGCGCTACGTGACGAGTATTTTGTTACAATGCCGCCCGTTTACACTGACTGGGATTTTTTGCAGCGAGTTTGCCAGCAGGTGGGATTTTCACCGGTTGTTATTCGCGAAGTTAATGAACCGCAAACGGTACTCGCTATGGTCAGTATGGGCATTGGTATCACATTGATAGCGGACAGCTACGCACAAATGAACTGGCCAGGTGTCATTTTCCGTCCGCTCAAACAGCGCATCCCTGCAGATTTATATATTGTTTATGAAACACAGCAGGTGACGCCCGCGATGGTTAAGCTGTTGGCTGCATTGACACAGTAG", - "dna_sequence_length": 885, - "functions": [ - "transcriptional activator of xapAB" - ], - "id": "CDS_2384", - "location": [ - [ - "NC_000913", - 2522477, - "-", - 885 - ] - ], - "md5": "5f001d87f1a375b13b81c0e5a8b0abe4", - "parent_gene": "", - "protein_md5": "a349e53e7e641c59727a480c8e6f1826", - "protein_translation": "MERVYRTDLKLLRYFLAVAEELHFGRAAARLNMSQPPLSIHIKELENQLGTQLFIRHSRSVVLTHAGKILMEESRRLLVNANNVLARIEQIGRGEAGRIELGVVGTAMWGRMRPVMRRFLRENPNVDVLFREKMPAMQMALLERRELDAGIWRMATEPPTGFTSLRLHESAFLVAMPEEHHLSSFSTVPLEALRDEYFVTMPPVYTDWDFLQRVCQQVGFSPVVIREVNEPQTVLAMVSMGIGITLIADSYAQMNWPGVIFRPLKQRIPADLYIVYETQQVTPAMVKLLAALTQ", - "protein_translation_length": 294, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13159" - ], - [ - "gene_synonym", - "GeneID:946868" - ], - [ - "gene_synonym", - "ECK2400" - ], - [ - "gene_synonym", - "xapB" - ], - [ - "gene_synonym", - "b2406" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45562" - ], - [ - "gene_synonym", - "JW2397" - ], - [ - "gene_synonym", - "GI:16130332" - ], - [ - "gene_synonym", - "NP_416901.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0007925" - ] - ], - "dna_sequence": "ATGAGCATCGCGATGCGCTTAAAGGTAATGTCCTTTTTGCAATATTTTATCTGGGGGAGCTGGCTGGTTACCCTCGGCTCTTACATGATTAATACTCTTCATTTCACCGGCGCTAATGTTGGCATGGTTTACAGTTCCAAAGGGATCGCCGCGATTATTATGCCTGGTATAATGGGGATCATCGCAGACAAATGGCTGCGCGCAGAACGTGCATACATGCTGTGTCACCTGGTGTGTGCGGGCGTACTTTTTTATGCGGCATCCGTAACTGATCCGGATATGATGTTTTGGGTGATGTTAGTCAATGCGATGGCGTTTATGCCGACTATTGCGTTATCGAACAGCGTCTCTTATTCCTGTCTTGCCCAGGCAGGGCTTGACCCGGTGACCGCTTTCCCGCCCATTCGCGTTTTTGGTACGGTGGGGTTCATTGTCGCGATGTGGGCAGTAAGCCTGCTGCATCTGGAATTGAGTAGTCTGCAGCTGTATATCGCGTCCGGTGCGTCATTGCTGCTGTCGGCTTATGCGCTGACTTTGCCGAAGATTCCGGTTGCGGAGAAAAAAGCGACCACATCGCTTGCCAGCAAGCTGGGTCTGGATGCCTTCGTGCTGTTTAAAAATCCACGCATGGCCATCTTTTTCCTCTTTGCCATGATGCTGGGTGCGGTACTGCAAATTACCAACGTTTTTGGTAATCCGTTCCTACATGATTTCGCCCGTAACCCGGAGTTTGCTGACAGTTTTGTGGTGAAATATCCCTCCATTTTACTGTCAGTTTCACAGATGGCAGAAGTGGGCTTTATACTGACTATCCCATTCTTTTTAAAGCGATTTGGCATTAAAACCGTCATGCTGATGAGTATGGTGGCCTGGACGCTGCGCTTTGGCTTCTTCGCCTATGGCGATCCGTCAACAACCGGATTTATTTTGCTGCTGCTGTCGATGATTGTTTATGGCTGTGCATTCGATTTCTTCAATATTTCTGGTTCGGTATTTGTCGAACAGGAAGTTGATTCCAGCATTCGTGCCAGCGCGCAGGGGCTCTTTATGACCATGGTAAATGGTGTCGGCGCATGGGTTGGCTCGATTCTGAGTGGCATGGCAGTAGATTACTTTTCGGTGGATGGCGTAAAAGACTGGCAAACTATCTGGCTGGTGTTTGCAGGATATGCTCTTTTTCTCGCAGTGATATTTTTCTTTGGGTTTAAATATAATCATGACCCTGAAAAGATAAAGCATCGAGCGGTGACTCATTAA", - "dna_sequence_length": 1257, - "functions": [ - "xanthosine transporter" - ], - "id": "CDS_2385", - "location": [ - [ - "NC_000913", - 2523985, - "-", - 1257 - ] - ], - "md5": "c4e46e1f0e0dfa21bb64ab4591e1033e", - "parent_gene": "", - "protein_md5": "d273c6e2ab3e7543c571307a7fbfc102", - "protein_translation": "MSIAMRLKVMSFLQYFIWGSWLVTLGSYMINTLHFTGANVGMVYSSKGIAAIIMPGIMGIIADKWLRAERAYMLCHLVCAGVLFYAASVTDPDMMFWVMLVNAMAFMPTIALSNSVSYSCLAQAGLDPVTAFPPIRVFGTVGFIVAMWAVSLLHLELSSLQLYIASGASLLLSAYALTLPKIPVAEKKATTSLASKLGLDAFVLFKNPRMAIFFLFAMMLGAVLQITNVFGNPFLHDFARNPEFADSFVVKYPSILLSVSQMAEVGFILTIPFFLKRFGIKTVMLMSMVAWTLRFGFFAYGDPSTTGFILLLLSMIVYGCAFDFFNISGSVFVEQEVDSSIRASAQGLFMTMVNGVGAWVGSILSGMAVDYFSVDGVKDWQTIWLVFAGYALFLAVIFFFGFKYNHDPEKIKHRAVTH", - "protein_translation_length": 418, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416902.1" - ], - [ - "gene_synonym", - "xapA" - ], - [ - "gene_synonym", - "b2407" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45563" - ], - [ - "gene_synonym", - "EcoGene:EG20250" - ], - [ - "gene_synonym", - "GI:16130333" - ], - [ - "gene_synonym", - "ECK2401" - ], - [ - "gene_synonym", - "ASAP:ABE-0007927" - ], - [ - "gene_synonym", - "GeneID:946878" - ], - [ - "gene_synonym", - "JW2398" - ], - [ - "gene_synonym", - "pndA" - ] - ], - "dna_sequence": "ATGTCTCAGGTTCAATTTTCTCATAACCCGCTGTTTTGCATAGATATTATCAAGACTTATAAACCTGATTTCACGCCACGAGTGGCCTTTATTTTAGGTTCCGGGCTCGGCGCGCTGGCCGATCAGATTGAGAACGCTGTCGCAATTTCCTACGAAAAGCTGCCGGGCTTCCCGGTAAGTACGGTACATGGTCATGCGGGGGAGTTAGTGCTGGGCCATCTCCAGGGCGTACCGGTGGTATGTATGAAAGGTCGCGGACATTTCTACGAAGGTCGTGGAATGACCATTATGACTGACGCAATTCGTACCTTTAAGCTGCTGGGCTGCGAGCTACTGTTCTGCACCAATGCGGCAGGCTCGCTGCGTCCGGAAGTGGGGGCAGGCAGCCTGGTCGCATTGAAAGATCATATCAACACCATGCCCGGTACGCCGATGGTGGGTCTTAACGATGATCGTTTTGGAGAGCGCTTCTTCTCACTGGCAAATGCCTACGATGCGGAATACCGCGCACTGTTACAAAAAGTGGCGAAAGAAGAGGGTTTCCCTCTGACGGAGGGCGTGTTCGTCTCGTATCCGGGGCCGAATTTCGAGACTGCGGCGGAAATTCGCATGATGCAAATTATTGGTGGGGATGTTGTTGGTATGTCTGTGGTGCCTGAGGTTATTTCAGCTCGCCATTGCGACCTTAAAGTCGTTGCGGTCTCTGCGATTACCAATATGGCGGAAGGTTTAAGCGATGTGAAATTGTCACATGCGCAAACGCTGGCGGCTGCGGAGCTCTCTAAGCAGAACTTCATCAACCTTATTTGTGGCTTTCTGCGCAAAATTGCCTGA", - "dna_sequence_length": 834, - "functions": [ - "purine nucleoside phosphorylase 2", - "nicotinamide 1-beta-D-riboside synthase" - ], - "id": "CDS_2386", - "location": [ - [ - "NC_000913", - 2524878, - "-", - 834 - ] - ], - "md5": "cbcb9304176c94157eec2e1613ca13f3", - "parent_gene": "", - "protein_md5": "810ed5968ddc5e27d1081642822c0e04", - "protein_translation": "MSQVQFSHNPLFCIDIIKTYKPDFTPRVAFILGSGLGALADQIENAVAISYEKLPGFPVSTVHGHAGELVLGHLQGVPVVCMKGRGHFYEGRGMTIMTDAIRTFKLLGCELLFCTNAAGSLRPEVGAGSLVALKDHINTMPGTPMVGLNDDRFGERFFSLANAYDAEYRALLQKVAKEEGFPLTEGVFVSYPGPNFETAAEIRMMQIIGGDVVGMSVVPEVISARHCDLKVVAVSAITNMAEGLSDVKLSHAQTLAAAELSKQNFINLICGFLRKIA", - "protein_translation_length": 277, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007930" - ], - [ - "gene_synonym", - "EcoGene:EG13160" - ], - [ - "gene_synonym", - "NP_416903.1" - ], - [ - "gene_synonym", - "b2408" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45564" - ], - [ - "gene_synonym", - "yfeN" - ], - [ - "gene_synonym", - "GeneID:946872" - ], - [ - "gene_synonym", - "GI:16130334" - ], - [ - "gene_synonym", - "ECK2402" - ], - [ - "gene_synonym", - "JW2399" - ] - ], - "dna_sequence": "ATGAAAAAACATCTTTTAACTCTGACACTTTCCTCTATATTAGCGATACCTGTTGTATCTCATGCAGAATTTAAAGGCGGTTTTGCAGATATCGGCGTGCATTATCTGGACTGGACCAGCCGGACTACCGAAAAATCGTCGACCAAATCACACAAAGATGATTTTGGTTATCTTGAATTTGAAGGTGGCGCTAACTTTAGTTGGGGAGAAATGTACGGGTTCTTCGACTGGGAAAACTTCTATAACGGTCGCCATAATAAACCAGGTAGCGAGCAGCGTTATACCTTTAAAAATACCAACCGTATTTACCTGGGTGACACCGGATTTAATCTCTACTTGCATGCGTATGGCACCTACGGTTCTGCGAATCGCGTGAATTTCCACGACGATATGTTCCTGTACGGTATCGGCTACAATTTCACCGGCAGCGGTTGGTGGTTCAAACCGTTCTTTGCTAAGCGTTATACAGATCAAACCTATTACACTGGCGACAACGGCTATGTCGCCGGCTGGGTTGCAGGTTACAACTTTATGCTGGGCAGCGAGAAATTCACTCTTACCAACTGGAACGAGTACGAGTTTGACCGTGACGCTACCTATGCAGCGGGTAATGGCGGTAAAGAAGGGCTGAATGGCGCAGTTGCACTGTGGTGGAATGCAACATCACACATTACTACGGGGATTCAGTATCGATATGCGGATGACAAACTGGGCGAAGATTTTTACCAGGATGCGATAATCTACTCCATCAAATTTAACTTCTGA", - "dna_sequence_length": 765, - "functions": [ - "putative outer membrane protein" - ], - "id": "CDS_2387", - "location": [ - [ - "NC_000913", - 2525127, - "+", - 765 - ] - ], - "md5": "9a1f37d6b1d63846fe0e8792b18f3961", - "parent_gene": "", - "protein_md5": "d013800745a406ed3e2f821f4a0fb62a", - "protein_translation": "MKKHLLTLTLSSILAIPVVSHAEFKGGFADIGVHYLDWTSRTTEKSSTKSHKDDFGYLEFEGGANFSWGEMYGFFDWENFYNGRHNKPGSEQRYTFKNTNRIYLGDTGFNLYLHAYGTYGSANRVNFHDDMFLYGIGYNFTGSGWWFKPFFAKRYTDQTYYTGDNGYVAGWVAGYNFMLGSEKFTLTNWNEYEFDRDATYAAGNGGKEGLNGAVALWWNATSHITTGIQYRYADDKLGEDFYQDAIIYSIKFNF", - "protein_translation_length": 254, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2400" - ], - [ - "gene_synonym", - "ASAP:ABE-0007932" - ], - [ - "gene_synonym", - "b2409" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACR7" - ], - [ - "gene_synonym", - "GeneID:946873" - ], - [ - "gene_synonym", - "yfeR" - ], - [ - "gene_synonym", - "GI:16130335" - ], - [ - "gene_synonym", - "ECK2403" - ], - [ - "gene_synonym", - "NP_416904.1" - ], - [ - "gene_synonym", - "EcoGene:EG14159" - ], - [ - "gene_synonym", - "osmT" - ] - ], - "dna_sequence": "ATGAATTATTCTTTAAAACAATTAAAGGTTTTCGTCACAGTAGCGCAGGAGAAAAGTTTTAGTCGTGCAGGAGAGCGTATCGGCCTGAGCCAGTCGGCAGTGAGTCACAGTGTGAAGGAACTGGAAAATCATACTGGTGTTCGCCTGCTGGACAGAACCACGCGTGAAGTGGTGCTTACAGATGCAGGGCAGCAGCTGGCTTTGCGTCTTGAGCGACTGCTGGATGAACTGAACAGCACGTTGCGCGATACCGGGCGTATGGGGCAACAACTGAGCGGAAAAGTTCGGGTCGCTGCCAGCCAGACCATTTCCGCGCATCTTATTCCGCAATGCATTGCTGAAAGCCATCGCCGCTATCCAGATATTCAGTTTGTCCTGCACGATCGTCCGCAGCAGTGGGTAATGGAAAGTATTCGCCAGGGAGATGTCGATTTTGGCATCGTCATCGATCCAGGCCCAGTGGGCGATCTGCAATGTGAAGCGATTCTTTCCGAGCCTTTCTTTCTGCTTTGCCATCGCGATAGCGCTTTGGCCGTGGAAGATTATGTACCCTGGCAGGCATTACAGGGAGCGAAATTGGTGTTGCAGGATTACGCGTCAGGCAGCCGACCGCTGATTGACGCAGCGCTGGCGCGCAATGGTATTCAGGCGAATATTGTGCAGGAGATTGGACATCCGGCGACGCTGTTCCCGATGGTAGCCGCAGGCATCGGCATCAGTATTCTTCCCGCACTGGCGCTACCATTGCCTGAAGGTAGCCCACTGGTGGTAAAGCGCATTACGCCGGTTGTTGAACGCCAGTTGATGCTGGTGCGCAGGAAGAACCGTTCACTTTCCACCGCCGCTGAAGCTTTATGGGACGTGGTACGAGACCAGGGCAATGCGCTAATGGCTGGGCGGGAAGGGGATCCGTTGTATCAGATATAG", - "dna_sequence_length": 927, - "functions": [ - "transcriptional regulator of yefH" - ], - "id": "CDS_2388", - "location": [ - [ - "NC_000913", - 2526856, - "-", - 927 - ] - ], - "md5": "2ffc1fb5d54d03d3056688743dcd17ef", - "parent_gene": "", - "protein_md5": "f0648d0531ada3da457da12529d932c4", - "protein_translation": "MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLLDRTTREVVLTDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQTISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGREGDPLYQI", - "protein_translation_length": 308, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007936" - ], - [ - "gene_synonym", - "yfeH" - ], - [ - "gene_synonym", - "b2410" - ], - [ - "gene_synonym", - "GI:16130336" - ], - [ - "gene_synonym", - "ECK2404" - ], - [ - "gene_synonym", - "JW5876" - ], - [ - "gene_synonym", - "EcoGene:EG12376" - ], - [ - "gene_synonym", - "GeneID:946874" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39836" - ], - [ - "gene_synonym", - "NP_416905.1" - ] - ], - "dna_sequence": "ATGAAACTTTTTCGTATCCTCGATCCTTTCACCTTAACCCTGATCACGGTGGTGTTGCTGGCCTCTTTCTTTCCGGCCAGAGGCGATTTCGTCCCCTTCTTTGAAAATCTGACCACCGCAGCTATTGCCCTGCTGTTCTTTATGCACGGCGCGAAGTTGTCGCGTGAGGCGATTATTGCTGGCGGTGGTCACTGGCGACTGCATTTGTGGGTAATGTGCAGCACCTTCGTGCTGTTTCCGATTCTGGGTGTACTGTTTGCCTGGTGGAAACCGGTAAATGTCGACCCGATGCTCTACTCCGGTTTTCTCTACTTGTGCATTCTCCCGGCTACCGTGCAGTCTGCAATCGCCTTCACGTCAATGGCGGGCGGTAACGTCGCGGCAGCGGTTTGTTCTGCGTCGGCATCCAGCCTGCTGGGGATTTTCCTTTCACCATTGCTGGTTGGTCTGGTGATGAATGTTCACGGTGCAGGGGGCAGCCTTGAGCAGGTCGGTAAAATTATGCTGCAACTGCTGCTGCCGTTTGTGTTGGGGCATCTTTCCCGGCCGTGGATTGGTGACTGGGTGTCGCGCAATAAAAAATGGATTGCGAAAACTGACCAGACGTCCATTCTGTTGGTGGTTTATACAGCGTTCAGCGAAGCCGTCGTTAATGGTATCTGGCATAAAGTTGGCTGGGGATCATTGCTGTTTATCGTGGTGGTCAGCTGCGTTCTTCTGGCTATCGTGATTGTAGTTAACGTCTTTATGGCACGCCGACTGAGCTTCAATAAGGCAGATGAAATTACTATCGTCTTTTGTGGTTCGAAAAAGAGTCTGGCAAATGGCATCCCGATGGCAAACATTCTGTTCCCCACATCGGTGATCGGTATGATGGTGCTGCCCCTGATGATTTTCCATCAGATCCAATTGATGGTCTGTGCGGTGCTGGCGCGTCGATACAAACGCCAGACCGAACAGTTACAGGCGCAGCAGGAAAGCAGCGCCGATAAAGCTTAA", - "dna_sequence_length": 999, - "functions": [ - "putative inorganic ion transporter" - ], - "id": "CDS_2389", - "location": [ - [ - "NC_000913", - 2526946, - "+", - 999 - ] - ], - "md5": "95367173972dc1c88b66cbd8e8b0d284", - "parent_gene": "", - "protein_md5": "c556e29794117f257152eefec0fd446e", - "protein_translation": "MKLFRILDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIALLFFMHGAKLSREAIIAGGGHWRLHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLYSGFLYLCILPATVQSAIAFTSMAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGAGGSLEQVGKIMLQLLLPFVLGHLSRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVNGIWHKVGWGSLLFIVVVSCVLLAIVIVVNVFMARRLSFNKADEITIVFCGSKKSLANGIPMANILFPTSVIGMMVLPLMIFHQIQLMVCAVLARRYKRQTEQLQAQQESSADKA", - "protein_translation_length": 332, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0285067" - ], - [ - "gene_synonym", - "b4546" - ], - [ - "gene_synonym", - "YP_588464.1" - ], - [ - "gene_synonym", - "EcoGene:EG14366" - ], - [ - "gene_synonym", - "GeneID:1450285" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD40" - ], - [ - "gene_synonym", - "GI:94541121" - ], - [ - "gene_synonym", - "JW5877" - ], - [ - "gene_synonym", - "ECK2405" - ], - [ - "gene_synonym", - "ypeB" - ] - ], - "dna_sequence": "ATGGAAAAAGAGCAGCTGATTGAAATAGCCAATACGATAATGCCGTTTGGCAAATACAAAGGGCGTCGCTTAATCGACCTGCCGGAGGAGTATCTGCTGTGGTTTGCCCGCAAAGATGAGTTCCCGGCAGGGAAGCTCGGTGAGCTAATGCAAATCACGCTGCTGATTAAAACCGAGGGGCTGACGCAACTGGTCCAGCCCCTGAAGCGTCCGCTTTAA", - "dna_sequence_length": 219, - "functions": [ - "DUF3820 family protein" - ], - "id": "CDS_2390", - "location": [ - [ - "NC_000913", - 2528159, - "-", - 219 - ] - ], - "md5": "c7693dc3ba54e2da5a6f9beba599a0cc", - "parent_gene": "", - "protein_md5": "40a7020ae00c1ec205d5229a05bdacc3", - "protein_translation": "MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAGKLGELMQITLLIKTEGLTQLVQPLKRPL", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2403" - ], - [ - "gene_synonym", - "lig" - ], - [ - "gene_synonym", - "ligA" - ], - [ - "gene_synonym", - "GeneID:946885" - ], - [ - "gene_synonym", - "ASAP:ABE-0007938" - ], - [ - "gene_synonym", - "pdeC" - ], - [ - "gene_synonym", - "b2411" - ], - [ - "gene_synonym", - "ECK2406" - ], - [ - "gene_synonym", - "GI:16130337" - ], - [ - "gene_synonym", - "lop" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15042" - ], - [ - "gene_synonym", - "EcoGene:EG10534" - ], - [ - "gene_synonym", - "dnaL" - ], - [ - "gene_synonym", - "NP_416906.1" - ] - ], - "dna_sequence": "ATGGAATCAATCGAACAACAACTGACAGAACTGCGAACGACGCTTCGCCATCATGAATATCTTTATCATGTGATGGATGCGCCGGAAATTCCCGACGCTGAATACGACAGGCTGATGCGCGAACTGCGCGAGCTGGAAACCAAACATCCAGAACTGATTACGCCTGATTCGCCTACTCAACGTGTAGGCGCTGCGCCGCTGGCGGCTTTCAGCCAGATACGCCATGAAGTACCAATGCTGTCACTGGATAACGTTTTTGATGAAGAAAGCTTTCTTGCTTTCAACAAACGTGTGCAGGACCGTCTGAAAAACAACGAGAAAGTCACCTGGTGCTGTGAGCTGAAGCTGGATGGTCTTGCCGTCAGTATTCTGTATGAAAATGGCGTTTTAGTCAGTGCCGCGACCCGTGGCGATGGCACCACCGGGGAAGATATCACGTCTAATGTGCGTACTATTCGCGCCATTCCGCTGAAGCTGCACGGAGAGAATATCCCGGCGCGTCTGGAAGTGCGTGGTGAAGTGTTCCTGCCGCAGGCGGGGTTCGAAAAGATTAACGAAGATGCGCGACGCACGGGCGGGAAAGTGTTTGCTAACCCACGTAATGCGGCAGCTGGTTCACTGCGTCAGCTTGATCCGCGTATTACAGCGAAGCGACCGCTCACTTTTTTCTGCTATGGCGTTGGTGTTCTGGAAGGTGGCGAGCTGCCGGATACTCATCTTGGCCGTTTACTGCAATTTAAAAAGTGGGGGTTGCCGGTCAGCGATCGGGTAACGCTTTGTGAATCGGCGGAAGAAGTGCTGGCGTTCTATCACAAAGTGGAAGAAGACCGCCCGACGCTGGGCTTTGATATCGACGGCGTGGTGATTAAGGTCAACTCACTGGCACAGCAGGAGCAGCTTGGCTTTGTCGCGCGTGCCCCGCGCTGGGCGGTAGCGTTTAAATTCCCGGCGCAGGAGCAGATGACCTTTGTGCGTGACGTCGAGTTTCAGGTTGGGCGTACTGGCGCGATTACGCCTGTTGCGCGTCTGGAACCTGTCCATGTTGCAGGCGTGCTGGTGAGTAACGCAACCTTACACAATGCGGATGAAATCGAACGTCTTGGTTTACGCATTGGCGATAAAGTGGTGATTCGCCGCGCTGGCGACGTGATCCCGCAGGTGGTTAACGTCGTGCTTTCTGAACGCCCGGAAGATACCCGTGAGGTTGTATTCCCGACGCATTGTCCGGTATGTGGTTCTGACGTTGAGCGTGTGGAAGGTGAAGCGGTTGCCCGCTGTACCGGTGGCCTGATTTGCGGTGCGCAGCGTAAAGAGTCGCTGAAACACTTTGTTTCCCGCCGTGCGATGGATGTTGACGGAATGGGCGACAAAATCATCGATCAGCTGGTTGAAAAAGAATATGTCCATACTCCGGCAGATCTGTTCAAACTCACCGCAGGCAAACTGACCGGACTGGAGCGTATGGGGCCAAAATCGGCACAAAACGTGGTTAACGCGCTGGAAAAAGCGAAAGAAACCACCTTTGCTCGCTTCCTCTATGCACTTGGCATCCGTGAAGTCGGCGAGGCCACCGCAGCAGGTCTGGCGGCATATTTCGGCACGCTGGAAGCGCTGGAAGCCGCTTCGATTGAAGAGCTGCAAAAGGTGCCTGATGTTGGCATTGTCGTTGCATCCCACGTTCACAACTTCTTTGCCGAAGAAAGCAACCGCAATGTCATCAGCGAGCTGTTGGCGGAAGGTGTTCACTGGCCTGCGCCGATCGTTATCAACGCGGAAGAGATTGACAGCCCGTTTGCTGGTAAAACCGTGGTGCTTACGGGCAGCTTAAGCCAGATGTCGCGTGATGACGCTAAAGCTCGACTGGTCGAACTGGGCGCGAAAGTCGCGGGCAGCGTGTCGAAGAAAACCGATCTGGTGATAGCGGGTGAAGCTGCAGGATCTAAACTGGCGAAGGCGCAGGAACTGGGCATTGAAGTCATCGACGAAGCGGAAATGCTGCGTTTGCTGGGTAGCTGA", 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"protein_translation_length": 671, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2404" - ], - [ - "gene_synonym", - "ASAP:ABE-0007942" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77173" - ], - [ - "gene_synonym", - "zipA" - ], - [ - "gene_synonym", - "b2412" - ], - [ - "gene_synonym", - "ECK2407" - ], - [ - "gene_synonym", - "EcoGene:EG14169" - ], - [ - "gene_synonym", - "NP_416907.1" - ], - [ - "gene_synonym", - "GI:16130338" - ], - [ - "gene_synonym", - "GeneID:946869" - ] - ], - "dna_sequence": "ATGATGCAGGATTTGCGTCTGATATTAATCATTGTTGGCGCGATCGCCATAATCGCTTTACTGGTACATGGTTTCTGGACCAGCCGTAAAGAACGATCTTCTATGTTCCGCGATCGGCCATTAAAACGAATGAAGTCAAAACGTGACGACGATTCTTATGACGAGGATGTCGAAGATGATGAGGGCGTTGGTGAGGTTCGTGTTCACCGCGTGAATCATGCCCCGGCTAACGCTCAGGAGCATGAGGCTGCTCGTCCGTCGCCGCAACACCAGTACCAACCGCCTTATGCGTCTGCGCAGCCGCGTCAACCGGTCCAGCAGCCGCCTGAAGCGCAGGTACCGCCGCAACATGCTCCGCATCCAGCGCAGCCGGTGCAGCAGCCTGCCTATCAGCCGCAGCCTGAACAGCCGTTGCAGCAGCCAGTTTCGCCACAGGTCGCGCCAGCGCCGCAGCCTGTGCATTCAGCACCGCAACCGGCACAACAGGCTTTCCAGCCTGCAGAACCCGTAGCGGCACCACAGCCTGAGCCTGTAGCGGAACCTGCTCCAGTTATGGATAAACCGAAGCGCAAAGAAGCGGTGATTATCATGAACGTCGCGGCGCATCACGGTAGCGAGCTAAACGGTGAACTGCTTCTTAACAGCATTCAACAAGCGGGCTTCATTTTTGGCGATATGAATATTTACCATCGTCATCTTAGCCCGGATGGCAGCGGCCCGGCGTTATTCAGCCTGGCGAATATGGTGAAACCGGGAACCTTTGATCCTGAAATGAAGGATTTCACTACTCCGGGTGTCACTATCTTTATGCAGGTACCGTCTTACGGTGACGAGCTGCAGAACTTCAAGCTGATGCTGCAATCTGCGCAGCATATTGCCGATGAAGTGGGCGGTGTCGTGCTTGACGATCAGCGCCGTATGATGACTCCGCAGAAATTGCGCGAGTACCAGGACATCATCCGCGAAGTCAAAGACGCCAACGCCTGA", - "dna_sequence_length": 987, - "functions": [ - "FtsZ stabilizer" - ], - "id": "CDS_2392", - "location": [ - [ - "NC_000913", - 2531233, - "-", - 987 - ] - ], - "md5": "f0abdc1dcdb10d2850e9c1fbb1e3b035", - "parent_gene": "", - "protein_md5": "909981ff266ee1accd4aa9206a0e7129", - "protein_translation": "MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRMKSKRDDDSYDEDVEDDEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPPYASAQPRQPVQQPPEAQVPPQHAPHPAQPVQQPAYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPAQQAFQPAEPVAAPQPEPVAEPAPVMDKPKRKEAVIIMNVAAHHGSELNGELLLNSIQQAGFIFGDMNIYHRHLSPDGSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYGDELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDIIREVKDANA", - "protein_translation_length": 328, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007953" - ], - [ - "gene_synonym", - "JW2406" - ], - [ - "gene_synonym", - "NP_416908.1" - ], - [ - "gene_synonym", - "b2413" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6J3" - ], - [ - "gene_synonym", - "GeneID:946875" - ], - [ - "gene_synonym", - "cysZ" - ], - [ - "gene_synonym", - "EcoGene:EG10003" - ], - [ - "gene_synonym", - "ECK2408" - ], - [ - "gene_synonym", - "GI:16130339" - ] - ], - "dna_sequence": "ATGGTTTCATCATTCACATCTGCCCCACGCAGCGGTTTTTACTATTTTGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGATGGGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCTACAATGGCTGAGTTATCTGTTGTGGCCTCTGGCTGTCATCTCTGTGCTGTTAGTGTTTGGCTATTTCTTCTCCACGATTGCTAACTGGATTGCCGCTCCGTTTAACGGTTTATTGGCTGAACAACTGGAAGCACGATTGACTGGCGCTACACCGCCAGATACCGGGATTTTCGGTATCATGAAAGATGTGCCGCGAATCATGAAACGCGAATGGCAAAAATTTGCCTGGTATCTGCCGCGCGCAATTGTATTACTAATTCTTTACTTCATCCCTGGTATTGGGCAAACCGTCGCGCCGGTACTGTGGTTCCTGTTTAGCGCCTGGATGTTAGCCATCCAGTATTGCGATTACCCCTTCGATAACCACAAAGTGCCGTTTAAAGAGATGCGCACCGCCCTGCGCACACGCAAAATCACCAATATGCAGTTTGGTGCTTTAACCAGCCTGTTTACGATGATCCCGCTGCTTAATCTGTTCATCATGCCCGTTGCCGTTTGTGGCGCGACGGCGATGTGGGTCGATTGCTATCGCGATAAACACGCGATGTGGCGGTAA", - "dna_sequence_length": 762, - "functions": [ - "sulfate transporter, sulfite inhibited" - ], - "id": "CDS_2393", - "location": [ - [ - "NC_000913", - 2531463, - "+", - 762 - ] - ], - "md5": "384ba9f192488cd20f3846f3e826f10e", - "parent_gene": "", - "protein_md5": "dbff7c9b90f1e95a740c4485693de230", - "protein_translation": "MVSSFTSAPRSGFYYFAQGWKLVSQPGIRRFVILPLLVNILLMGGAFWWLFTQLDVWIPTLMSYVPDWLQWLSYLLWPLAVISVLLVFGYFFSTIANWIAAPFNGLLAEQLEARLTGATPPDTGIFGIMKDVPRIMKREWQKFAWYLPRAIVLLILYFIPGIGQTVAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKEMRTALRTRKITNMQFGALTSLFTMIPLLNLFIMPVAVCGATAMWVDCYRDKHAMWR", - "protein_translation_length": 253, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0007957" - ], - [ - "gene_synonym", - "GI:16130340" - ], - [ - "gene_synonym", - "cysK" - ], - [ - "gene_synonym", - "JW2407" - ], - [ - "gene_synonym", - "b2414" - ], - [ - "gene_synonym", - "NP_416909.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABK5" - ], - [ - "gene_synonym", - "EcoGene:EG10192" - ], - [ - "gene_synonym", - "cysZ" - ], - [ - "gene_synonym", - "GeneID:946877" - ], - [ - "gene_synonym", - "ECK2409" - ] - ], - "dna_sequence": "ATGAGTAAGATTTTTGAAGATAACTCGCTGACTATCGGTCACACGCCGCTGGTTCGCCTGAATCGCATCGGTAACGGACGCATTCTGGCGAAGGTGGAATCTCGTAACCCCAGCTTCAGCGTTAAGTGCCGTATCGGTGCCAACATGATTTGGGATGCCGAAAAGCGCGGCGTGCTGAAACCAGGCGTTGAACTGGTTGAACCGACCAGCGGTAATACCGGGATTGCACTGGCCTATGTAGCTGCCGCTCGCGGTTACAAACTCACCCTGACCATGCCAGAAACCATGAGTATTGAACGCCGCAAGCTGCTGAAAGCGTTAGGTGCAAACCTGGTGCTGACGGAAGGTGCTAAAGGCATGAAAGGCGCAATCCAAAAAGCAGAAGAAATTGTCGCCAGCAATCCAGAGAAATACCTGCTGCTGCAACAATTCAGCAATCCGGCAAACCCTGAAATTCACGAAAAGACCACCGGTCCGGAGATATGGGAAGATACCGACGGTCAGGTTGATGTATTTATTGCTGGCGTTGGGACTGGCGGTACGCTGACTGGCGTCAGCCGCTACATTAAAGGCACCAAAGGCAAGACCGATCTTATCTCTGTCGCCGTTGAGCCAACCGATTCTCCAGTTATCGCCCAGGCGCTGGCAGGTGAAGAGATTAAACCTGGCCCGCATAAAATTCAGGGTATTGGCGCTGGTTTTATCCCGGCTAACCTCGATCTCAAGCTGGTCGATAAAGTCATTGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCACCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAA", - "dna_sequence_length": 972, - "functions": [ - "cysteine synthase A, O-acetylserine sulfhydrolase A subunit" - ], - "id": "CDS_2394", - "location": [ - [ - "NC_000913", - 2532409, - "+", - 972 - ] - ], - "md5": "ce48e0b6a7cae2707d3c3a6035529340", - "parent_gene": "", - "protein_md5": "9675ae45136a897a184c15dedd7ec1c6", - "protein_translation": "MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ", - "protein_translation_length": 323, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130341" - ], - [ - "gene_synonym", - "NP_416910.1" - ], - [ - "gene_synonym", - "JW2408" - ], - [ - "gene_synonym", - "ctr" - ], - [ - "gene_synonym", - "EcoGene:EG10788" - ], - [ - "gene_synonym", - "ASAP:ABE-0007962" - ], - [ - "gene_synonym", - "hpr" - ], - [ - "gene_synonym", - "b2415" - ], - [ - "gene_synonym", - "ptsH" - ], - [ - "gene_synonym", - "ECK2410" - ], - [ - "gene_synonym", - "GeneID:946886" - ], - [ - "gene_synonym", - "iex?" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA04" - ] - ], - "dna_sequence": "ATGTTCCAGCAAGAAGTTACCATTACCGCTCCGAACGGTCTGCACACCCGCCCTGCTGCCCAGTTTGTAAAAGAAGCTAAGGGCTTCACTTCTGAAATTACTGTGACTTCCAACGGCAAAAGCGCCAGCGCGAAAAGCCTGTTTAAACTGCAGACTCTGGGCCTGACTCAAGGTACCGTTGTGACTATCTCCGCAGAAGGCGAAGACGAGCAGAAAGCGGTTGAACATCTGGTTAAACTGATGGCGGAACTCGAGTAA", - "dna_sequence_length": 258, - "functions": [ - "phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr)" - ], - "id": "CDS_2395", - "location": [ - [ - "NC_000913", - 2533764, - "+", - 258 - ] - ], - "md5": "f2f8e562abca57bd8736550c2e341115", - "parent_gene": "", - "protein_md5": "30f33c2d8de065a355696e4e16a20b30", - "protein_translation": "MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE", - "protein_translation_length": 85, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416911.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08839" - ], - [ - "gene_synonym", - "GI:16130342" - ], - [ - "gene_synonym", - "EcoGene:EG10789" - ], - [ - "gene_synonym", - "ctr" - ], - [ - "gene_synonym", - "JW2409" - ], - [ - "gene_synonym", - "b2416" - ], - [ - "gene_synonym", - "ASAP:ABE-0007967" - ], - [ - "gene_synonym", - "ptsI" - ], - [ - "gene_synonym", - "ECK2411" - ], - [ - "gene_synonym", - "GeneID:946879" - ] - ], - "dna_sequence": "ATGATTTCAGGCATTTTAGCATCCCCGGGTATCGCTTTCGGTAAAGCTCTGCTTCTGAAAGAAGACGAAATTGTCATTGACCGGAAAAAAATTTCTGCCGACCAGGTTGATCAGGAAGTTGAACGTTTTCTGAGCGGTCGTGCCAAGGCATCAGCCCAGCTGGAAACGATCAAAACGAAAGCTGGTGAAACGTTCGGTGAAGAAAAAGAAGCCATCTTTGAAGGGCATATTATGCTGCTCGAAGATGAGGAGCTGGAGCAGGAAATCATAGCCCTGATTAAAGATAAGCACATGACAGCTGACGCAGCTGCTCATGAAGTTATCGAAGGTCAGGCTTCTGCCCTGGAAGAGCTGGATGATGAATACCTGAAAGAACGTGCGGCTGACGTACGTGATATCGGTAAGCGCCTGCTGCGCAACATCCTGGGCCTGAAGATTATCGACCTGAGCGCCATTCAGGATGAAGTCATTCTGGTTGCCGCTGACCTGACGCCGTCCGAAACCGCACAGCTGAACCTGAAGAAGGTGCTGGGTTTCATCACCGACGCGGGTGGCCGTACTTCCCACACCTCTATCATGGCGCGTTCTCTGGAACTACCTGCTATCGTGGGTACCGGTAGCGTCACCTCTCAGGTGAAAAATGACGACTATCTGATTCTGGATGCCGTAAATAATCAGGTTTACGTCAATCCAACCAACGAAGTTATTGATAAAATGCGCGCTGTTCAGGAGCAAGTGGCTTCTGAAAAAGCAGAGCTTGCTAAACTGAAAGATCTGCCAGCTATTACGCTGGACGGTCACCAGGTAGAAGTATGCGCTAACATTGGTACGGTTCGTGACGTTGAAGGTGCAGAGCGTAACGGCGCTGAAGGCGTTGGTCTGTATCGTACTGAGTTCCTGTTCATGGACCGCGACGCACTGCCCACTGAAGAAGAACAGTTTGCTGCTTACAAAGCAGTGGCTGAAGCGTGTGGCTCGCAAGCGGTTATCGTTCGTACCATGGACATCGGCGGCGACAAAGAGCTGCCATACATGAACTTCCCGAAAGAAGAGAACCCGTTCCTCGGCTGGCGCGCTATCCGTATCGCGATGGATCGTAGAGAGATCCTGCGCGATCAGCTCCGCGCTATCCTGCGTGCCTCGGCTTTCGGTAAATTGCGCATTATGTTCCCGATGATCATCTCTGTTGAAGAAGTGCGTGCACTGCGCAAAGAGATCGAAATCTACAAACAGGAACTGCGCGACGAAGGTAAAGCGTTTGACGAGTCAATTGAAATCGGCGTAATGGTGGAAACACCGGCTGCCGCAACAATTGCACGTCATTTAGCCAAAGAAGTTGATTTCTTTAGTATCGGCACCAATGATTTAACGCAGTACACTCTGGCAGTTGACCGTGGTAATGATATGATTTCACACCTTTACCAGCCAATGTCACCGTCCGTGCTGAACTTGATCAAGCAAGTTATTGATGCTTCTCATGCTGAAGGCAAATGGACTGGCATGTGTGGTGAGCTTGCTGGCGATGAACGTGCTACACTTCTGTTGCTGGGGATGGGTCTGGACGAATTCTCTATGAGCGCCATTTCTATCCCGCGCATTAAGAAGATTATCCGTAACACGAACTTCGAAGATGCGAAGGTGTTAGCAGAGCAGGCTCTTGCTCAACCGACAACGGACGAGTTAATGACGCTGGTTAACAAGTTCATTGAAGAAAAAACAATCTGCTAA", - "dna_sequence_length": 1728, - "functions": [ - "PEP-protein phosphotransferase of PTS system (enzyme I)" - ], - "id": "CDS_2396", - "location": [ - [ - "NC_000913", - 2534066, - "+", - 1728 - ] - ], - "md5": "762a4ba85d716fa2207ceb7107ce08a9", - "parent_gene": "", - "protein_md5": "91bd43f5ae683b80ea757a9c967b9398", - "protein_translation": "MISGILASPGIAFGKALLLKEDEIVIDRKKISADQVDQEVERFLSGRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADAAAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLRNILGLKIIDLSAIQDEVILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYLILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIGTVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTMDIGGDKELPYMNFPKEENPFLGWRAIRIAMDRREILRDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKVLAEQALAQPTTDELMTLVNKFIEEKTIC", - "protein_translation_length": 575, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "crr" - ], - [ - "gene_synonym", - "iex" - ], - [ - "gene_synonym", - "JW2410" - ], - [ - "gene_synonym", - "gsr" - ], - [ - "gene_synonym", - "tgs" - ], - [ - "gene_synonym", - "GI:16130343" - ], - [ - "gene_synonym", - "b2417" - ], - [ - "gene_synonym", - "ECK2412" - ], - [ - "gene_synonym", - "ASAP:ABE-0007971" - ], - [ - "gene_synonym", - "treD" - ], - [ - "gene_synonym", - "NP_416912.1" - ], - [ - "gene_synonym", - "GeneID:946880" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69783" - ], - [ - "gene_synonym", - "EcoGene:EG10165" - ] - ], - "dna_sequence": "ATGGGTTTGTTCGATAAACTGAAATCTCTGGTTTCCGACGACAAGAAGGATACCGGAACTATTGAGATCATTGCTCCGCTCTCTGGCGAGATCGTCAATATCGAAGACGTGCCGGATGTCGTTTTTGCGGAAAAAATCGTTGGTGATGGTATTGCTATCAAACCAACGGGTAACAAAATGGTCGCGCCAGTAGACGGCACCATTGGTAAAATCTTTGAAACCAACCACGCATTCTCTATCGAATCTGATAGCGGCGTTGAACTGTTCGTCCACTTCGGTATCGACACCGTTGAACTGAAAGGCGAAGGCTTCAAGCGTATTGCTGAAGAAGGTCAGCGCGTGAAAGTTGGCGATACTGTCATTGAATTTGATCTGCCGCTGCTGGAAGAGAAAGCCAAGTCTACCCTGACTCCGGTTGTTATCTCCAACATGGACGAAATCAAAGAACTGATCAAACTGTCCGGTAGCGTAACCGTGGGTGAAACCCCGGTTATCCGCATCAAGAAGTAA", - "dna_sequence_length": 510, - "functions": [ - "glucose-specific enzyme IIA component of PTS" - ], - "id": "CDS_2397", - "location": [ - [ - "NC_000913", - 2535834, - "+", - 510 - ] - ], - "md5": "37cb55a74df5c0756b272484156a111a", - "parent_gene": "", - "protein_md5": "eee28c230b565de59322e7a02f56dcc3", - "protein_translation": "MGLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVGETPVIRIKK", - "protein_translation_length": 169, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "pdxK" - ], - [ - "gene_synonym", - "pdxL" - ], - [ - "gene_synonym", - "b2418" - ], - [ - "gene_synonym", - "GI:16130344" - ], - [ - "gene_synonym", - "ECK2413" - ], - [ - "gene_synonym", - "yfeI" - ], - [ - "gene_synonym", - "ASAP:ABE-0007973" - ], - [ - "gene_synonym", - "thiJ" - ], - [ - "gene_synonym", - "JW2411" - ], - [ - "gene_synonym", - "GeneID:946881" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P40191" - ], - [ - "gene_synonym", - "EcoGene:EG12642" - ], - [ - "gene_synonym", - "NP_416913.1" - ] - ], - "dna_sequence": "ATGAGTAGTTTGTTGTTGTTTAACGATAAGAGTAGGGCACTGCAGGCGGATATCGTCGCCGTGCAGTCGCAGGTGGTTTACGGCAGCGTGGGCAACAGCATTGCCGTGCCTGCTATCAAACAGAACGGCCTGAATGTCTTTGCCGTGCCGACGGTATTGCTGAGCAATACGCCGCATTATGACACTTTCTACGGTGGTGCGATTCCGGACGAATGGTTTAGCGGCTATTTGCGTGCGCTTCAGGAGCGTGATGCGCTGCGCCAACTTCGTGCTGTAACCACGGGCTATATGGGAACGGCATCGCAAATCAAAATCCTTGCCGAGTGGCTGACTGCGCTACGCAAAGACCATCCTGACCTATTGATCATGGTCGATCCGGTGATTGGCGATATTGATAGCGGAATTTATGTCAAACCTGACCTTCCCGAAGCGTATCGACAATATTTACTGCCGCTGGCGCAGGGAATTACCCCCAATATCTTTGAGTTGGAAATCCTGACCGGTAAAAATTGCCGCGATCTCGACAGTGCCATTGCTGCCGCAAAAAGTCTGCTTTCAGACACATTAAAATGGGTGGTGGTTACCAGCGCCTCCGGTAATGAAGAAAATCAGGAGATGCAGGTTGTGGTGGTCACTGCCGACAGCGTGAATGTCATTTCCCATTCACGGGTAAAAACCGACCTGAAAGGGACTGGCGACCTGTTTTGTGCTCAGCTCATCAGTGGCTTGCTGAAAGGGAAGGCGTTAACCGATGCAGTGCACCGAGCGGGGTTGCGCGTACTGGAAGTGATGCGCTACACCCAGCAGCATGAGAGCGATGAATTGATTTTGCCGCCGCTGGCGGAAGCATAA", - "dna_sequence_length": 852, - "functions": [ - "pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase" - ], - "id": "CDS_2398", - "location": [ - [ - "NC_000913", - 2537237, - "-", - 852 - ] - ], - "md5": "4759e93afed869b62567b3492fdeaa4a", - "parent_gene": "", - "protein_md5": "d371d2d204ff54d40970d93dbfef7c21", - "protein_translation": "MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVKTDLKGTGDLFCAQLISGLLKGKALTDAVHRAGLRVLEVMRYTQQHESDELILPPLAEA", - "protein_translation_length": 283, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2412" - ], - [ - "gene_synonym", - "GI:16130345" - ], - [ - "gene_synonym", - "b2419" - ], - [ - "gene_synonym", - "yfeK" - ], - [ - "gene_synonym", - "ASAP:ABE-0007977" - ], - [ - "gene_synonym", - "EcoGene:EG12644" - ], - [ - "gene_synonym", - "ECK2414" - ], - [ - "gene_synonym", - "GeneID:946876" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47702" - ], - [ - "gene_synonym", - "NP_416914.1" - ] - ], - "dna_sequence": "ATGAAGAAAATCATTTGTCTGGTCATTACACTACTAATGACACTCCCCGTTTACGCGAAGTTAACTGCCCATGAAGAAGCCCGCATCAACGCCATGCTGGAGGGATTAGCACAGAAAAAGGATTTGATATTTGTGCGCAACGGTGATGAACATACCTGCTATGAAGCGGTTTCTCATCTGCGTCTGAAGCTCGGCAATACCCGTAACCGCATTGACACTGCCGAGCAGTTTATTGATAAGGTTGCTTCGTCGTCATCGATTACTGGGAAGCCGTATATTGTGAAGATCCCCGGTAAGAGCGATGAGAACGCACAGCCTTTTTTACATGCGTTAATTGCGCAGACGGATAAAACGGTGCCTGCGGAAGGAAATTAA", - "dna_sequence_length": 375, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2399", - "location": [ - [ - "NC_000913", - 2537342, - "+", - 375 - ] - ], - "md5": "290a821d3d7f0c0842fc42a9a46bbec5", - "parent_gene": "", - "protein_md5": "b2fa010e4341b27b468c57421675913c", - "protein_translation": "MKKIICLVITLLMTLPVYAKLTAHEEARINAMLEGLAQKKDLIFVRNGDEHTCYEAVSHLRLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKIPGKSDENAQPFLHALIAQTDKTVPAEGN", - "protein_translation_length": 124, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P78271" - ], - [ - "gene_synonym", - "JW2413" - ], - [ - "gene_synonym", - "GeneID:946887" - ], - [ - "gene_synonym", - "ASAP:ABE-0007979" - ], - [ - "gene_synonym", - "NP_416915.1" - ], - [ - "gene_synonym", - "b2420" - ], - [ - "gene_synonym", - "ECK2415" - ], - [ - "gene_synonym", - "yfeS" - ], - [ - "gene_synonym", - "EcoGene:EG14160" - ], - [ - "gene_synonym", - "GI:16130346" - ] - ], - "dna_sequence": "ATGAAAAAACGCTTTATTTATCACGATGAAAAATCGAATAAATTTTGGTGGATAGATTACGAAGGGGATAGTTTAGCTGTCAACTATGGCAAGGTAGGTAGTATTGGTAAATTCCAGACAAAAGAGTTCGATAATGAAGAACAGTGTCTGAAAGAAGCCAGTAAATTGATTGCCGCAAAAATGAAGAAAGGCTATCAAGAAGATCCAAAGTTTAACTTCATGGATCGCTACTATTTTGATGATGAAGAAATTGGGTTACATGTTAAAACGTCACACCCAAACTTCCAGTGCCATTTTACTGATCCACTTTATATGTGTTGCTGGGATGAAGAATCTCCTTTTGGCAGCGATGAAGGTGCTGATGCTCTAAACGTTCTTGAAAATAGCCTCCGTAAAGAGCCGGATCTGGACTGTGCTGATTTCCCTCAAATGTTAATTGAAACTATGTGGGGTATGAAATACATCGCTATGGACAGTATTCTTGAAGAGGATGTTCGTGCGCAATTACTAGTCGATGAAATGAGCACTATCCAGAGCAATATGATTACCTACGCAACTGCATTCGGTCAGATTAAAGTCATGGGTAAAATCTCCCATAAACTTAAAAAGATGGGACTCAATGCACTAGCGCGTCATCAGCTTACCGCAAAAATTCTTCAATGGGGTGACGGTCAGGACTCACCAATACTTCAAAAAATGATTGATGACCTTACGGCGTTTCCTCACGAAAATTAA", - "dna_sequence_length": 735, - "functions": [ - "WGR domain protein" - ], - "id": "CDS_2400", - "location": [ - [ - "NC_000913", - 2537749, - "+", - 735 - ] - ], - "md5": "cd85b2223cbc5b9f4b0bbc7e973b19b7", - "parent_gene": "", - "protein_md5": "50628d3728e7f0bb038d81c553202a46", - "protein_translation": "MKKRFIYHDEKSNKFWWIDYEGDSLAVNYGKVGSIGKFQTKEFDNEEQCLKEASKLIAAKMKKGYQEDPKFNFMDRYYFDDEEIGLHVKTSHPNFQCHFTDPLYMCCWDEESPFGSDEGADALNVLENSLRKEPDLDCADFPQMLIETMWGMKYIAMDSILEEDVRAQLLVDEMSTIQSNMITYATAFGQIKVMGKISHKLKKMGLNALARHQLTAKILQWGDGQDSPILQKMIDDLTAFPHEN", - "protein_translation_length": 244, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cysM" - ], - [ - "gene_synonym", - "ASAP:ABE-0007982" - ], - [ - "gene_synonym", - "GI:16130347" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16703" - ], - [ - "gene_synonym", - "JW2414" - ], - [ - "gene_synonym", - "b2421" - ], - [ - "gene_synonym", - "ECK2416" - ], - [ - "gene_synonym", - "EcoGene:EG10193" - ], - [ - "gene_synonym", - "GeneID:946888" - ], - [ - "gene_synonym", - "NP_416916.1" - ] - ], - "dna_sequence": "GTGAGTACATTAGAACAAACAATAGGCAATACGCCTCTGGTGAAGTTGCAGCGAATGGGGCCGGATAACGGCAGTGAAGTGTGGTTAAAACTGGAAGGCAATAACCCGGCAGGTTCGGTGAAAGATCGTGCGGCACTTTCGATGATCGTCGAGGCGGAAAAGCGCGGGGAAATTAAACCGGGTGATGTCTTAATCGAAGCCACCAGTGGTAACACCGGCATTGCGCTGGCAATGATTGCCGCGCTGAAAGGCTATCGCATGAAATTGCTGATGCCCGACAACATGAGCCAGGAACGCCGTGCGGCGATGCGTGCTTATGGTGCGGAACTGATTCTTGTCACCAAAGAGCAGGGCATGGAAGGTGCGCGCGATCTGGCGCTGGAGATGGCGAATCGTGGCGAAGGAAAGCTGCTCGATCAGTTCAATAATCCCGATAACCCTTATGCGCATTACACCACCACTGGGCCGGAAATCTGGCAGCAAACCGGCGGGCGCATCACTCATTTTGTCTCCAGCATGGGGACGACCGGCACTATCACCGGCGTCTCACGCTTTATGCGCGAACAATCCAAACCGGTGACCATTGTCGGCCTGCAACCGGAAGAGGGCAGCAGCATTCCCGGCATTCGCCGCTGGCCTACGGAATATCTGCCGGGGATTTTCAACGCTTCTCTGGTGGATGAGGTGCTGGATATTCATCAGCGCGATGCGGAAAACACCATGCGCGAACTGGCGGTGCGGGAAGGAATATTCTGTGGCGTCAGCTCCGGCGGCGCGGTTGCCGGAGCACTGCGGGTGGCAAAAGCTAACCCTGACGCGGTGGTGGTGGCGATCATCTGCGATCGTGGCGATCGCTACCTTTCTACCGGGGTGTTTGGGGAAGAGCATTTTAGCCAGGGGGCGGGGATTTAA", - "dna_sequence_length": 912, - "functions": [ - "cysteine synthase B (O-acetylserine sulfhydrolase B)" - ], - "id": "CDS_2401", - "location": [ - [ - "NC_000913", - 2539583, - "-", - 912 - ] - ], - "md5": "f046b6c73a0c0c7970e9eee704caad06", - "parent_gene": "", - "protein_md5": "411405b610696c93d210c34800289bf8", - "protein_translation": "MSTLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPTEYLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPDAVVVAIICDRGDRYLSTGVFGEEHFSQGAGI", - "protein_translation_length": 303, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16676" - ], - [ - "gene_synonym", - "ASAP:ABE-0007986" - ], - [ - "gene_synonym", - "JW2415" - ], - [ - "gene_synonym", - "b2422" - ], - [ - "gene_synonym", - "GI:16130348" - ], - [ - "gene_synonym", - "cysA" - ], - [ - "gene_synonym", - "ECK2417" - ], - [ - "gene_synonym", - "GeneID:946889" - ], - [ - "gene_synonym", - "NP_416917.1" - ], - [ - "gene_synonym", - "EcoGene:EG10183" - ] - ], - "dna_sequence": "ATGAGCATTGAGATTGCCAATATTAAGAAGTCGTTTGGTCGCACCCAGGTGCTGAACGATATCTCACTGGATATTCCTTCAGGTCAGATGGTCGCGTTGCTGGGGCCGTCCGGTTCCGGGAAAACCACGCTGCTGCGCATTATCGCCGGGCTGGAGCATCAAACCAGCGGGCATATTCGCTTCCACGGCACCGACGTGAGCCGCCTGCACGCACGTGATCGTAAAGTCGGTTTCGTGTTCCAGCATTACGCGCTGTTCCGCCATATGACGGTGTTCGACAATATCGCTTTTGGCCTGACGGTGCTGCCGCGTCGCGAGCGCCCGAATGCCGCAGCCATCAAAGCGAAAGTGACAAAATTGCTGGAAATGGTCCAGCTTGCCCATCTGGCGGATCGTTATCCGGCGCAGCTTTCCGGCGGCCAGAAACAGCGCGTGGCGCTGGCGCGCGCGCTGGCTGTGGAACCGCAAATTCTGCTGCTTGATGAACCGTTTGGCGCGCTGGATGCGCAGGTGCGTAAAGAGCTGCGTCGCTGGCTGCGTCAACTCCATGAAGAACTAAAATTCACCAGCGTTTTTGTGACCCACGATCAGGAAGAAGCGACCGAAGTAGCTGATCGTGTAGTTGTGATGAGCCAGGGCAATATTGAACAGGCTGACGCGCCGGATCAGGTATGGCGCGAACCGGCGACCCGTTTTGTGCTCGAATTTATGGGCGAAGTGAACCGCCTGCAGGGAACCATTCGCGGCGGGCAGTTCCATGTTGGCGCGCATCGCTGGCCGCTGGGCTACACACCTGCGTATCAGGGGCCGGTGGATCTCTTCCTGCGCCCTTGGGAAGTGGATATCAGCCGCCGTACCAGCCTCGATTCGCCGCTGCCGGTACAGGTACTGGAAGCCAGCCCGAAAGGTCACTACACCCAATTAGTGGTGCAGCCGCTGGGGTGGTACAACGAACCGCTGACGGTCGTGATGCATGGCGACGATGCCCCGCAGCGTGGCGAGCGTTTATTCGTTGGTCTGCAACATGCGCGGCTGTATAACGGCGACGAGCGTATCGAAACCCGCGATGAGGAACTTGCTCTCGCACAAAGCGCCTGA", - "dna_sequence_length": 1098, - "functions": [ - "sulfate/thiosulfate transporter subunit" - ], - "id": "CDS_2402", - "location": [ - [ - "NC_000913", - 2540814, - "-", - 1098 - ] - ], - "md5": "450a23be631fff69a07fac38017210fd", - "parent_gene": "", - "protein_md5": "eebe6746730e1289ce3d1cce1159eed6", - "protein_translation": "MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPDQVWREPATRFVLEFMGEVNRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLRPWEVDISRRTSLDSPLPVQVLEASPKGHYTQLVVQPLGWYNEPLTVVMHGDDAPQRGERLFVGLQHARLYNGDERIETRDEELALAQSA", - "protein_translation_length": 365, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2418" - ], - [ - "gene_synonym", - "GI:90111430" - ], - [ - "gene_synonym", - "JW2416" - ], - [ - "gene_synonym", - "b2423" - ], - [ - "gene_synonym", - "ASAP:ABE-0007988" - ], - [ - "gene_synonym", - "GeneID:2847743" - ], - [ - "gene_synonym", - "EcoGene:EG10198" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEB0" - ], - [ - "gene_synonym", - "cysW" - ], - [ - "gene_synonym", - "YP_026168.2" - ] - ], - "dna_sequence": "ATGGCGGAAGTTACCCAATTGAAGCGTTATGACGCGCGCCCGATTAACTGGGGCAAATGGTTTCTGATTGGCATCGGGATGCTGGTTTCGGCGTTCATCCTGCTGGTGCCGATGATTTACATCTTCGTGCAGGCATTCAGCAAGGGGCTGATGCCGGTTTTACAGAATCTGGCCGATCCGGACATGCTGCACGCCATCTGGCTGACGGTGATGATCGCGCTGATTGCCGTACCGGTAAACCTGGTGTTCGGCATTCTGCTGGCCTGGCTGGTGACGCGCTTTAACTTCCCTGGACGCCAGTTACTGCTGACGCTACTGGACATTCCGTTTGCCGTATCGCCGGTGGTTGCCGGTCTGGTGTATTTGCTGTTCTACGGCTCTAACGGCCCGCTCGGCGGTTGGCTCGACGAGCATAACCTGCAAATTATGTTCTCCTGGCCGGGAATGGTGCTGGTCACCATCTTCGTGACGTGTCCGTTTGTGGTGCGCGAACTGGTGCCGGTGATGTTAAGCCAGGGCAGCCAGGAAGACGAAGCGGCGATTTTGCTTGGCGCGTCCGGCTGGCAGATGTTCCGTCGCGTCACATTACCGAACATCCGCTGGGCGCTGCTTTATGGCGTGGTGTTGACCAACGCCCGCGCAATTGGCGAGTTTGGCGCGGTGTCGGTGGTTTCCGGCTCGATTCGCGGCGAAACCCTGTCGCTGCCGTTACAGATTGAATTGCTGGAGCAGGACTACAACACCGTCGGCTCCTTTACCGCTGCGGCGCTGTTAACGCTGATGGCGATTATCACCCTGTTTTTAAAAAGTATGTTGCAGTGGCGCCTGGAGAATCAGGAAAAACGCGCACAGCAGGAGGAACATCATGAGCATTGA", - "dna_sequence_length": 876, - "functions": [ - "sulfate/thiosulfate ABC transporter permease" - ], - "id": "CDS_2403", - "location": [ - [ - "NC_000913", - 2541679, - "-", - 876 - ] - ], - "md5": "9626f0e5552da5f5bf61355c71a57e08", - "parent_gene": "", - "protein_md5": "ded884cbdc1ad9162fd1f7548b7f6267", - "protein_translation": "MAEVTQLKRYDARPINWGKWFLIGIGMLVSAFILLVPMIYIFVQAFSKGLMPVLQNLADPDMLHAIWLTVMIALIAVPVNLVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQIMFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRLENQEKRAQQEEHHEH", - "protein_translation_length": 291, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2419" - ], - [ - "gene_synonym", - "GeneID:946882" - ], - [ - "gene_synonym", - "ASAP:ABE-0007990" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16701" - ], - [ - "gene_synonym", - "JW2417" - ], - [ - "gene_synonym", - "GI:16130349" - ], - [ - "gene_synonym", - "b2424" - ], - [ - "gene_synonym", - "EcoGene:EG10197" - ], - [ - "gene_synonym", - "NP_416919.1" - ], - [ - "gene_synonym", - "cysU" - ], - [ - "gene_synonym", - "cysT" - ] - ], - "dna_sequence": "ATGTTTGCTGTCTCCTCCAGACGCGTGCTGCCGGGCTTTACCTTAAGCCTCGGCACCAGTCTGCTGTTTGTGTGCCTGATTTTGCTGCTGCCGCTCTCCGCGCTGGTGATGCAACTGGCCCAGATGAGCTGGGCGCAGTACTGGGAGGTGATCACCAACCCGCAGGTGGTCGCGGCCTACAAAGTAACGCTGCTGTCGGCGTTTGTGGCATCGATTTTTAACGGCGTTTTCGGTCTGCTGATGGCGTGGATCCTAACCCGCTATCGCTTCCCAGGCCGCACGCTGCTTGATGCGCTGATGGATTTACCCTTTGCGCTGCCAACGGCTGTCGCCGGTTTAACGCTGGCCTCGCTCTTTTCCGTAAACGGTTTTTACGGTGAATGGCTGGCGAAGTTTGATATCAAAGTCACCTATACATGGCTGGGGATTGCGGTGGCTATGGCCTTTACCAGCATTCCGTTTGTGGTGCGTACCGTGCAGCCGGTGCTGGAAGAGTTAGGCCCGGAATATGAAGAAGCGGCGGAAACGCTTGGTGCAACGCGCTGGCAGAGTTTCTGCAAAGTGGTGCTGCCGGAGCTTTCTCCGGCGCTGGTGGCGGGCGTGGCGCTGTCGTTTACCCGTAGTCTTGGTGAATTTGGCGCGGTGATTTTTATCGCCGGAAATATCGCGTGGAAGACGGAAGTGACGTCGCTGATGATTTTTGTGCGCTTACAGGAGTTTGATTACCCGGCAGCGAGCGCGATTGCTTCGGTGATCCTCGCGGCATCTCTGCTGCTGCTGTTCTCAATTAACACTCTGCAAAGTCGCTTTGGTCGGCGTGTGGTAGGTCATTAA", - "dna_sequence_length": 834, - "functions": [ - "sulfate/thiosulfate ABC transporter permease" - ], - "id": "CDS_2404", - "location": [ - [ - "NC_000913", - 2542512, - "-", - 834 - ] - ], - "md5": "86a234077a9c4a99fc22b24f13e15a7b", - "parent_gene": "", - "protein_md5": "10f1a1a47a2b2b016072c5e3bb34b0ad", - "protein_translation": "MFAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSWAQYWEVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFCKVVLPELSPALVAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRVVGH", - "protein_translation_length": 277, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130350" - ], - [ - "gene_synonym", - "ASAP:ABE-0007992" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16700" - ], - [ - "gene_synonym", - "GeneID:946883" - ], - [ - "gene_synonym", - "NP_416920.1" - ], - [ - "gene_synonym", - "JW2418" - ], - [ - "gene_synonym", - "ECK2420" - ], - [ - "gene_synonym", - "b2425" - ], - [ - "gene_synonym", - "EcoGene:EG10195" - ], - [ - "gene_synonym", - "cysP" - ] - ], - "dna_sequence": "ATGGCCGTTAACTTACTGAAAAAGAACTCACTCGCGCTGGTCGCTTCTCTGCTGCTGGCGGGCCATGTACAGGCAACGGAACTGCTGAACAGTTCTTATGACGTCTCCCGCGAGCTGTTTGCCGCCCTGAATCCGCCGTTTGAGCAACAATGGGCAAAAGATAACGGCGGCGACAAACTGACGATAAAACAATCTCATGCCGGGTCATCAAAACAGGCGCTGGCGATTTTACAGGGCTTAAAAGCCGACGTTGTCACTTATAACCAGGTGACCGACGTACAAATCCTGCACGATAAAGGCAAGCTGATCCCGGCCGACTGGCAGTCGCGCCTGCCGAATAATAGCTCGCCGTTCTACTCCACCATGGGCTTCCTGGTGCGTAAGGGTAACCCGAAGAATATCCACGATTGGAACGACCTGGTGCGCTCCGACGTGAAGCTGATTTTCCCGAACCCGAAAACGTCGGGTAACGCGCGTTATACCTATCTGGCGGCATGGGGCGCAGCGGATAAAGCTGACGGTGGTGACAAAGGCAAAACCGAACAGTTTATGACCCAGTTCCTGAAAAACGTTGAAGTGTTCGATACTGGCGGTCGTGGCGCGACCACCACTTTTGCCGAGCGCGGCCTGGGCGATGTGCTGATTAGCTTCGAATCGGAAGTGAACAACATCCGTAAACAGTATGAAGCGCAGGGCTTTGAAGTGGTGATTCCGAAAACCAACATTCTGGCGGAATTCCCGGTGGCGTGGGTTGATAAAAACGTGCAGGCCAACGGTACGGAAAAAGCCGCCAAAGCCTATCTGAACTGGCTCTATAGCCCGCAGGCGCAAACCATCATCACCGACTATTACTACCGCGTGAATAACCCGGAGGTGATGGACAAACTGAAAGACAAATTCCCGCAGACCGAGCTGTTCCGCGTGGAAGACAAATTTGGCTCCTGGCCGGAAGTGATGAAAACCCACTTCACCAGCGGCGGCGAGTTAGACAAGCTGTTAGCGGCGGGGCGTAACTGA", - "dna_sequence_length": 1017, - "functions": [ - "thiosulfate-binding protein" - ], - "id": "CDS_2405", - "location": [ - [ - "NC_000913", - 2543528, - "-", - 1017 - ] - ], - "md5": "cee13e4d1a5f56de195b82aac990186c", - "parent_gene": "", - "protein_md5": "480a37ce631a4078d4ba92298c3e15e1", - "protein_translation": "MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKGKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLAAGRN", - "protein_translation_length": 338, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12133" - ], - [ - "gene_synonym", - "GI:90111431" - ], - [ - "gene_synonym", - "JW5394" - ], - [ - "gene_synonym", - "ASAP:ABE-0007996" - ], - [ - "gene_synonym", - "GeneID:946898" - ], - [ - "gene_synonym", - "NP_416921.4" - ], - [ - "gene_synonym", - "b2426" - ], - [ - "gene_synonym", - "ECK2421" - ], - [ - "gene_synonym", - "ucpA" - ], - [ - "gene_synonym", - "yfeF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37440" - ] - ], - "dna_sequence": "ATGGGTAAACTCACGGGCAAGACAGCACTGATTACGGGCGCATTGCAGGGAATTGGCGAAGGAATTGCCAGAACTTTTGCACGTCATGGCGCGAACCTAATCTTGCTGGATATCTCCCCTGAGATCGAAAAGCTGGCGGACGAACTGTGTGGTCGTGGTCATCGCTGTACGGCGGTTGTCGCCGATGTGCGTGACCCGGCGTCGGTAGCCGCAGCTATCAAACGCGCGAAGGAAAAAGAAGGGCGCATTGATATCCTGGTGAATAACGCAGGCGTTTGTCGTCTGGGCAGTTTCCTCGATATGAGCGATGACGATCGCGATTTCCATATTGACATCAATATTAAAGGCGTATGGAACGTCACGAAGGCGGTGCTGCCGGAGATGATTGCCCGCAAAGATGGTCGCATTGTGATGATGTCTTCAGTCACTGGTGATATGGTGGCCGATCCTGGCGAAACGGCGTACGCCTTAACGAAAGCGGCGATTGTTGGCCTGACAAAATCGCTGGCGGTGGAGTACGCGCAGTCTGGTATTCGCGTTAACGCCATTTGCCCGGGATACGTGCGCACACCAATGGCGGAAAGCATTGCCCGCCAGTCGAACCCGGAAGATCCAGAGTCGGTGCTGACTGAAATGGCGAAAGCAATCCCGATGCGTCGCCTCGCCGATCCGCTGGAAGTCGGCGAACTGGCGGCCTTCCTCGCATCGGATGAATCCAGCTATTTAACCGGTACACAGAATGTGATTGATGGCGGCAGCACACTGCCGGAGACGGTTAGCGTCGGTATCTGA", - "dna_sequence_length": 792, - "functions": [ - "furfural resistance protein, putative short-chain oxidoreductase" - ], - "id": "CDS_2406", - "location": [ - [ - "NC_000913", - 2544623, - "-", - 792 - ] - ], - "md5": "3dae894a52f820b3b8dbb35ff3f79eec", - "parent_gene": "", - "protein_md5": "5c51b9de041df249451496766b6b5469", - "protein_translation": "MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPMRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPETVSVGI", - "protein_translation_length": 263, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130352" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77245" - ], - [ - "gene_synonym", - "GeneID:946568" - ], - [ - "gene_synonym", - "JW2420" - ], - [ - "gene_synonym", - "b2427" - ], - [ - "gene_synonym", - "ECK2422" - ], - [ - "gene_synonym", - "yfeT" - ], - [ - "gene_synonym", - "murR" - ], - [ - "gene_synonym", - "NP_416922.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008000" - ], - [ - "gene_synonym", - "EcoGene:EG14161" - ] - ], - "dna_sequence": "ATGTTGTACCTGACGAAAATAAGCAATGCGGGGAGTGAATTCACCGAAAACGAGCAAAAAATCGCTGACTTTCTGCAGGCCAACGTGAGTGAGCTGCAATCCGTTTCTTCACGGCAGATGGCGAAACAGCTCGGCATTAGCCAGTCGAGCATAGTGAAATTTGCCCAAAAACTCGGCGCGCAAGGATTTACTGAATTGCGTATGGCGTTAATAGGCGAATACAGTGCCAGCCGGGAGAAAACGAATGCCACGGCACTGCACCTGCACAGTTCGATTACCAGTGATGATTCGCTGGAAGTGATCGCGCGCAAACTGAATCGCGAAAAAGAGCTGGCGCTGGAGCAAACCTGCGCGTTGCTCGATTACGCGCGGCTGCAAAAAATCATTGAGGTCATCAGTAAAGCACCGTTTATCCAGATAACGGGCCTGGGCGGATCGGCGCTGGTGGGGCGCGATCTGTCGTTCAAACTGATGAAAATTGGCTATCGCGTGGCCTGCGAAGCCGACACGCACGTACAAGCCACCGTTTCTCAGGCGTTGAAAAAAGGCGATGTACAAATCGCTATCTCTTACAGCGGCAGTAAAAAAGAGATTGTCTTGTGCGCAGAAGCGGCACGAAAGCAGGGGGCAACGGTGATTGCCATTACTTCTCTGACTGACTCTCCGCTGCGGCGGCTGGCGCATTTCACCCTCGATACCGTTTCCGGAGAAACCGAATGGCGTAGCTCGTCGATGTCTACCCGCACGGCGCAAAATTCTGTTACCGATTTACTGTTTGTTGGCCTTGTGCAACTCAATGATGTGGAGTCATTGAAAATGATTCAGCGCAGCAGTGAGCTAACACAACGCCTGAAATGA", - "dna_sequence_length": 858, - "functions": [ - "repressor for murPQ, MurNAc 6-P inducible" - ], - "id": "CDS_2407", - "location": [ - [ - "NC_000913", - 2545609, - "-", - 858 - ] - ], - "md5": "801d389beeba69eaf495c38ccc535fbf", - "parent_gene": "", - "protein_md5": "b46f10ef56added92a63b1b09f0f6dac", - "protein_translation": "MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEVIARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK", - "protein_translation_length": 285, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946893" - ], - [ - "gene_synonym", - "b2428" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76535" - ], - [ - "gene_synonym", - "JW2421" - ], - [ - "gene_synonym", - "ECK2423" - ], - [ - "gene_synonym", - "GI:16130353" - ], - [ - "gene_synonym", - "yfeU" - ], - [ - "gene_synonym", - "murQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0008007" - ], - [ - "gene_synonym", - "EcoGene:EG14162" - ], - [ - "gene_synonym", - "NP_416923.1" - ] - ], - "dna_sequence": "ATGCAATTTGAAAAGATGATTACTGAAGGCTCGAACACCGCCTCGGCTGAAATTGACCGCGTATCGACGCTGGAAATGTGCCGGATTATCAACGATGAAGATAAAACCGTACCGCTTGCCGTTGAGCGCGTACTGCCGGATATCGCCGCGGCGATCGATGTTATCCACGCCCAGGTAAGCGGCGGCGGGCGTCTGATTTACCTCGGTGCGGGAACATCCGGTCGTCTGGGGATTCTGGATGCCAGCGAATGTCCGCCCACCTACGGCGTGAAACCGGGTCTGGTGGTTGGTTTGATTGCTGGCGGCGAATATGCCATTCAGCACGCGGTGGAAGGCGCGGAAGATAGCCGGGAAGGCGGTGTTAATGATCTGAAAAATATTAATTTAACGGCACAGGATGTGGTGGTTGGCATTGCTGCCAGCGGTCGCACGCCGTATGTGATTGCCGGACTGGAATACGCACGCCAGCTCGGCTGCCGCACAGTGGGAATTTCCTGTAATCCGGGGAGCGCCGTTTCAACCACCGCTGAGTTTGCCATTACACCGATTGTAGGTGCCGAAGTTGTTACCGGTTCTTCGCGGATGAAAGCAGGTACAGCGCAGAAACTGGTGCTCAATATGCTTTCCACCGGGCTGATGATTAAATCCGGCAAAGTGTTCGGCAACCTGATGGTCGATGTGGTCGCCACCAACGAAAAACTGCATGTGCGACAGGTCAATATTGTTAAAAACGCCACCGGATGTAGCGCAGAGCAAGCGGAAGCGGCGTTAATTGCTTGCGAGCGCAACTGTAAAACGGCCATTGTGATGGTGCTGAAAAATCTCGATGCCGCAGAAGCTAAAAAACGCCTGGATCAACACGGCGGCTTTATTCGTCAGGTTTTAGACAAGGAATAA", - "dna_sequence_length": 897, - "functions": [ - "N-acetylmuramic acid 6-phosphate (MurNAc-6-P) etherase" - ], - "id": "CDS_2408", - "location": [ - [ - "NC_000913", - 2545773, - "+", - 897 - ] - ], - "md5": "beadd096aa8a855acbfcf8f902bc3c7a", - "parent_gene": "", - "protein_md5": "12246a5d4fc09952c26e955b8965a4f5", - "protein_translation": "MQFEKMITEGSNTASAEIDRVSTLEMCRIINDEDKTVPLAVERVLPDIAAAIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGGEYAIQHAVEGAEDSREGGVNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCRTVGISCNPGSAVSTTAEFAITPIVGAEVVTGSSRMKAGTAQKLVLNMLSTGLMIKSGKVFGNLMVDVVATNEKLHVRQVNIVKNATGCSAEQAEAALIACERNCKTAIVMVLKNLDAAEAKKRLDQHGGFIRQVLDKE", - "protein_translation_length": 298, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2429" - ], - [ - "gene_synonym", - "GI:16130354" - ], - [ - "gene_synonym", - "GeneID:946894" - ], - [ - "gene_synonym", - "ECK2424" - ], - [ - "gene_synonym", - "JW2422" - ], - [ - "gene_synonym", - "NP_416924.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77272" - ], - [ - "gene_synonym", - "yfeV" - ], - [ - "gene_synonym", - "ASAP:ABE-0008009" - ], - [ - "gene_synonym", - "murP" - ], - [ - "gene_synonym", - "EcoGene:EG14163" - ] - ], - "dna_sequence": "ATGGCCAAAGAGATCAGCAGTGAACTTCTGAACACCATTCTTACCCGTGTCGGCGGACCGGGAAATATCGCCAGTTGTGGTAACTGTATGACGCGCCTGCGTCTGGGTGTACATGACAGTTCACTGGTTGATCCCAATATCAAAACGCTGGAAGGCGTGAAGGGCGTCATTTTGACCAGCGACCAGGTGCAGGTCGTTTTTGGGCCTGGTAAAGCGCATCGTGCCGCAAAAGCGATGAGCGAGCTGCTGGGAGAAGCACCGGTACAGGATGCCGCAGAAATCGCCGCCCAGAACAAACGTCAGTTAAAAGCCAAACAAACCTCCGGCGTGCAACAATTTCTCGCCAAATTCGCCACCATCTTCACGCCGCTGATCCCCGGTTTTATTGCCGCCGGTCTGCTGCTGGGGATAGCGACGTTAATTGCCACGGTGATGCACGTTCCGGCAGATGCTCAGGGAACACTACCCGATGCGCTGAATTTTATGAAGGTGTTCAGCAAAGGTTTGTTCACTTTCCTGGTGATTCTGGTGGGCTATAACGCCGCCCAGGCATTTGGCGGCACGGGCGTAAATGGCGCAATTATCGCCGCGCTCTTTTTGCTCGGTTATAACCCCGCAGCGACCACCGGTTACTACGCCGGTTTTCACGATTTCTTTGGTCTGCCCATCGATCCGCGCGGCAATATTATCGGCGTGCTGATTGCCGCGTGGGCCTGCGCCCGCATTGAAGGCATGGTGCGCCGCTTTATGCCGGACGATCTCGACATGCTGCTGACCTCGTTAATCACCCTGCTGATCACCGCTACGCTTGCGTACCTGATCATTATGCCGCTGGGTGGCTGGTTATTCGAAGGTATGTCATGGCTGTTTATGCACCTGAACAGTAATCCGTTCGGTTGTGCGGTTTTAGCCGGGCTGTTCCTGATCGCCGTGGTATTTGGCGTGCATCAGGGCTTTATTCCTGTTTACCTCGCGTTAATGGACAGCCAGGGATTCAACAGCTTATTTCCCATCCTTTCAATGGCAGGCGCGGGCCAGGTGGGCGCGGCGCTGGCACTCTACTGGCGGGCGCAACCGCACAGTGCGCTACGCAGTCAGGTACGCGGGGCGATTATTCCCGGCCTGCTGGGCGTTGGTGAACCGCTGATTTACGGTGTCACCCTGCCCCGCATGAAGCCGTTTGTTACCGCCTGTTTAGGCGGCGCGGCGGGCGGTTTGTTTATCGGCCTGATAGCCTGGTGGGGTCTGCCGATGGGCTTAAACAGCGCCTTTGGGCCGTCTGGTCTGGTAGCGCTGCCGCTGATGACTTCCGCACAAGGCATCCTTCCGGCCATGGCGGTTTATGCTGGCGGGATTCTGGTGGCATGGGTTTGCGGGTTTATTTTCACCACGCTCTTTGGCTGCCGTAACGTCAATCTGGACTGA", - "dna_sequence_length": 1425, - "functions": [ - "N-acetylmuramic acid permease, EIIBC component, PTS system" - ], - "id": "CDS_2409", - "location": [ - [ - "NC_000913", - 2546673, - "+", - 1425 - ] - ], - "md5": "03720efd80a95ac9aaaf9567a873f8c4", - "parent_gene": "", - "protein_md5": "bedd03002b8cc4f2c282bc01f83c4ff2", - "protein_translation": "MAKEISSELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVDPNIKTLEGVKGVILTSDQVQVVFGPGKAHRAAKAMSELLGEAPVQDAAEIAAQNKRQLKAKQTSGVQQFLAKFATIFTPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPDALNFMKVFSKGLFTFLVILVGYNAAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFHDFFGLPIDPRGNIIGVLIAAWACARIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIMPLGGWLFEGMSWLFMHLNSNPFGCAVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNSLFPILSMAGAGQVGAALALYWRAQPHSALRSQVRGAIIPGLLGVGEPLIYGVTLPRMKPFVTACLGGAAGGLFIGLIAWWGLPMGLNSAFGPSGLVALPLMTSAQGILPAMAVYAGGILVAWVCGFIFTTLFGCRNVNLD", - "protein_translation_length": 474, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111432" - ], - [ - "gene_synonym", - "NP_416925.2" - ], - [ - "gene_synonym", - "JW5395" - ], - [ - "gene_synonym", - "ECK2425" - ], - [ - "gene_synonym", - "b2430" - ], - [ - "gene_synonym", - "yfeW" - ], - [ - "gene_synonym", - "EcoGene:EG14164" - ], - [ - "gene_synonym", - "GeneID:946907" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77619" - ], - [ - "gene_synonym", - "ASAP:ABE-0008012" - ], - [ - "gene_synonym", - "pbp4B" - ] - ], - "dna_sequence": "ATGAAACGGACAATGCTCTATCTTTCTCTGCTGGCTGTTAGTTGTAGCGTCAGCGCCGCAAAATACCCTGTTCTGACAGAAAGCTCGCCAGAGAAAGCAGGGTTTAACGTCGAACGGCTTAACCAGATGGATCGCTGGATTAGCCAGCAAGTTGATGTCGGTTATCCCAGCGTAAACCTGCTGATCATTAAAGATAATCAGATTGTGTATCGCAAAGCCTGGGGAGCGGCGAAAAAGTACGATGGCAGCGTGTTGATGGAACAGCCTGTCAAAGCCACCACCGGGACGCTGTATGACCTGGCCTCAAACACCAAAATGTACGCCACGAACTTCGCCCTGCAAAAGCTGATGAGCGAAGGCAAACTGCATCCTGACGATCGGATTGCGAAATATATTCCGGGGTTTGCCGATAGTCCAAATGACACCATTAAAGGCAAAAACACCCTGCGGATTTCTGACCTGCTGCATCACAGCGGCGGTTTCCCGGCAGATCCGCAATACCCGAATAAAGCGGTCGCGGGCGCGTTATATTCCCAGGATAAAGGCCAGACGCTGGAGATGATCAAGCGCACGCCGCTGGAATATCAGCCCGGCAGCAAACATATCTACAGCGATGTCGATTATATGCTGCTTGGATTTATCGTCGAGTCGGTTACCGGTCAGCCGCTTGACCGCTATGTTGAAGAGTCGATTTATCGCCCGCTCGGCCTGACACATACGGTATTTAACCCGCTGCTGAAAGGCTTTAAACCGCAACAAATTGCCGCCACGGAATTGAACGGCAATACCCGCGATGGCGTGATCCATTTCCCGAATATCCGCACCTCCACTCTCTGGGGTCAGGTGCACGATGAAAAAGCCTTTTATTCGATGGGCGGCGTTTCCGGGCACGCAGGTTTGTTTTCCAATACCGGCGATATTGCGGTGTTAATGCAAACGATGCTGAACGGCGGGGGCTATGGTGATGTGCAGCTGTTCAATGCGGAAACGGTGAAGATGTTCACCACCAGCTCTAAGGAAGATGCCACTTTTGGCCTCGGCTGGCGCGTGAATGGTAATGCCACCATGACGCCGACGTTTGGCACGCTGGCAAGCCCGCAAACCTACGGTCACACTGGCTGGACCGGAACGGTGACCGTTATCGATCCGGTGAATCATATGACGATTGTGATGTTAAGCAACAAGCCACATTCGCCGGTTGCCGATCCGCAAAAGAATCCCAATATGTTCGAAAGCGGTCAGTTGCCGATTGCAACTTATGGTTGGGTAGTTGATCAGGTGTATGCGGCGTTAAAGCAGAAGTAA", - "dna_sequence_length": 1305, - "functions": [ - "penicillin binding protein PBP4B", - "weak DD-carboxypeptidase activity" - ], - "id": "CDS_2410", - "location": [ - [ - "NC_000913", - 2548102, - "+", - 1305 - ] - ], - "md5": "6d3bd7b4e4a46258a0ab563a127e1e58", - "parent_gene": "", - "protein_md5": "d3f02c5493f8927d19b932ad13d2c154", - "protein_translation": "MKRTMLYLSLLAVSCSVSAAKYPVLTESSPEKAGFNVERLNQMDRWISQQVDVGYPSVNLLIIKDNQIVYRKAWGAAKKYDGSVLMEQPVKATTGTLYDLASNTKMYATNFALQKLMSEGKLHPDDRIAKYIPGFADSPNDTIKGKNTLRISDLLHHSGGFPADPQYPNKAVAGALYSQDKGQTLEMIKRTPLEYQPGSKHIYSDVDYMLLGFIVESVTGQPLDRYVEESIYRPLGLTHTVFNPLLKGFKPQQIAATELNGNTRDGVIHFPNIRTSTLWGQVHDEKAFYSMGGVSGHAGLFSNTGDIAVLMQTMLNGGGYGDVQLFNAETVKMFTTSSKEDATFGLGWRVNGNATMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMTIVMLSNKPHSPVADPQKNPNMFESGQLPIATYGWVVDQVYAALKQK", - "protein_translation_length": 434, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111433" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76536" - ], - [ - "gene_synonym", - "ASAP:ABE-0008015" - ], - [ - "gene_synonym", - "ECK2426" - ], - [ - "gene_synonym", - "JW2424" - ], - [ - "gene_synonym", - "b2431" - ], - [ - "gene_synonym", - "EcoGene:EG14165" - ], - [ - "gene_synonym", - "yfeX" - ], - [ - "gene_synonym", - "GeneID:946913" - ], - [ - "gene_synonym", - "NP_416926.4" - ] - ], - "dna_sequence": "ATGTCTCAGGTTCAGAGTGGCATTTTGCCAGAACATTGCCGCGCGGCGATTTGGATCGAAGCCAACGTGAAAGGGGAAGTTGACGCCCTGCGTGCGGCCAGTAAAACATTTGCCGACAAACTGGCAACTTTTGAAGCGAAATTCCCGGACGCGCATCTTGGTGCGGTGGTTGCCTTTGGTAACAACACCTGGCGCGCTCTGAGCGGCGGCGTTGGGGCAGAAGAGCTGAAAGATTTTCCGGGCTACGGTAAAGGCCTTGCGCCGACGACCCAGTTCGATGTGTTGATCCACATTCTTTCTCTGCGTCACGACGTAAACTTCTCTGTCGCCCAGGCGGCGATGGAAGCCTTTGGTGACTGCATTGAAGTGAAAGAAGAGATCCACGGCTTCCGTTGGGTTGAAGAGCGTGACCTGAGCGGCTTTGTTGACGGTACGGAAAACCCGGCGGGTGAAGAGACGCGTCGCGAAGTGGCGGTTATCAAAGACGGCGTGGATGCGGGCGGCAGCTATGTGTTTGTCCAGCGTTGGGAACACAACCTGAAGCAGCTCAACCGGATGAGCGTTCACGATCAGGAGATGGTGATCGGGCGCACCAAAGAGGCCAACGAAGAGATCGACGGCGACGAACGTCCGGAAACCTCTCACCTCACCCGCGTTGATCTGAAAGAAGATGGCAAAGGGCTGAAGATTGTTCGCCAGAGCCTGCCGTACGGCACTGCCAGTGGCACTCACGGTCTGTACTTCTGCGCCTACTGCGCGCGTCTGCATAACATTGAGCAGCAACTGCTGAGCATGTTTGGCGATACCGATGGTAAGCGTGATGCGATGTTGCGTTTCACCAAACCGGTAACCGGCGGCTATTATTTCGCACCGTCGCTGGACAAGTTGATGGCGCTGTAA", - "dna_sequence_length": 900, - "functions": [ - "porphyrinogen oxidase, cytoplasmic" - ], - "id": "CDS_2411", - "location": [ - [ - "NC_000913", - 2550545, - "-", - 900 - ] - ], - "md5": "be3b81cc6b9a3ecfcfa4b4d2ae9a5a95", - "parent_gene": "", - "protein_md5": "bbea8af71654ac8a0057b60449e7f1ff", - "protein_translation": "MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATFEAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLRHDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVIKDGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMVIGRTKEANEEIDGDERPETSHLTRVDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAMLRFTKPVTGGYYFAPSLDKLMAL", - "protein_translation_length": 299, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76537" - ], - [ - "gene_synonym", - "GeneID:946919" - ], - [ - "gene_synonym", - "GI:16130357" - ], - [ - "gene_synonym", - "ECK2427" - ], - [ - "gene_synonym", - "JW2425" - ], - [ - "gene_synonym", - "NP_416927.1" - ], - [ - "gene_synonym", - "b2432" - ], - [ - "gene_synonym", - "ASAP:ABE-0008017" - ], - [ - "gene_synonym", - "EcoGene:EG14166" - ], - [ - "gene_synonym", - "yfeY" - ] - ], - "dna_sequence": "ATGAAATCGCTGCGTTTAATGTTATGCGCTATGCCATTGATGCTGACCGGCTGTTCCACGATGTCGTCAGTTAACTGGTCTGCCGCTAACCCGTGGAACTGGTTTGGGTCGTCCACCAAAGTGAGCGAGCAGGGCGTGGGTGAATTAACGGCGTCCACACCACTGCAAGAACAAGCCATTGCCGATGCGCTTGATGGCGATTATCGCCTGCGCAGCGGAATGAAAACCGCGAACGGCAACGTGGTGCGCTTTTTTGAAGTGATGAAGGGCGACAACGTGGCGATGGTGATTAACGGCGATCAAGGCACGATCAGTCGCATTGACGTGCTGGATAGCGATATTCCTGCTGACACCGGTGTTAAAATCGGTACACCGTTTAGCGACCTTTACAGCAAAGCATTTGGCAATTGCCAAAAAGCTGATGGTGATGATAATCGTGCCGTCGAATGTAAAGCCGAAGGCAGTCAACATATTAGCTACCAGTTCAGCGGGGAATGGCGTGGTCCTGAAGGGTTAATGCCTTCGGACGATACCCTGAAAAACTGGAAAGTCAGTAAAATTATCTGGCGGCGTTAA", - "dna_sequence_length": 576, - "functions": [ - "RpoE-regulated lipoprotein" - ], - "id": "CDS_2412", - "location": [ - [ - "NC_000913", - 2551216, - "-", - 576 - ] - ], - "md5": "a6dfb493e2ea2d3bcd811ecd06544661", - "parent_gene": "", - "protein_md5": "cdcea2e903168b78e3f87e53f7d17c13", - "protein_translation": "MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAIADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISYQFSGEWRGPEGLMPSDDTLKNWKVSKIIWRR", - "protein_translation_length": 191, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008023" - ], - [ - "gene_synonym", - "ECK2428" - ], - [ - "gene_synonym", - "GI:90111434" - ], - [ - "gene_synonym", - "JW2426" - ], - [ - "gene_synonym", - "EcoGene:EG14167" - ], - [ - "gene_synonym", - "NP_416928.4" - ], - [ - "gene_synonym", - "b2433" - ], - [ - "gene_synonym", - "yfeZ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76538" - ], - [ - "gene_synonym", - "GeneID:946918" - ] - ], - "dna_sequence": "ATGAAGAGTACTGAGTTTCATCCTGTCCATTATGATGCGCACGGTCGCCTGCGTTTACCCTTGCTCTTCTGGCTTGTGCTATTGCTTCAGGCGCGAACCTGGGTGCTGTTTGTCATTGCCGGTGCGTCGCGCGAGCAGGGTACTGCGCTGCTAAATCTGTTTTATCCCGATCACGATAATTTCTGGCTGGGGCTGATTCCTGGCATTCCGGCGGTGCTGGCGTTTTTGTTGAGCGGTCGGCGGGCTACGTTTCCTCGCACCTGGCGTGTACTCTATTTTCTGTTGCTGTTGGCGCAGGTGGTTTTACTTTGCTGGCAACCGTGGCTGTGGCTGAACGGTGAATCCGTTAGCGGTATCGGTCTGGCGCTGGTAGTGGCGGATATTGTGGCGTTAATCTGGCTGCTGACCAATCGACGTTTACGCGCTTGTTTTTATGAAGTAAAAGAATAA", - "dna_sequence_length": 450, - "functions": [ - "inner membrane protein" - ], - "id": "CDS_2413", - "location": [ - [ - "NC_000913", - 2551726, - "-", - 450 - ] - ], - "md5": "a3b1112e6a276ddbe16254c72b225808", - "parent_gene": "", - "protein_md5": "6666f3efa941086340a83ee2e50c9ebf", - "protein_translation": "MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFVIAGASREQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRATFPRTWRVLYFLLLLAQVVLLCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRRLRACFYEVKE", - "protein_translation_length": 149, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2429" - ], - [ - "gene_synonym", - "GI:90111435" - ], - [ - "gene_synonym", - "ASAP:ABE-0008028" - ], - [ - "gene_synonym", - "GeneID:946917" - ], - [ - "gene_synonym", - "JW2427" - ], - [ - "gene_synonym", - "b2434" - ], - [ - "gene_synonym", - "NP_416929.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76539" - ], - [ - "gene_synonym", - "EcoGene:EG14168" - ], - [ - "gene_synonym", - "ypeA" - ] - ], - "dna_sequence": "ATGGAGATACGCGTATTTCGCCAGGAAGATTTCGAAGAGGTCATCACCCTTTGGGAGCGTTGCGACTTGCTGCGTCCGTGGAACGATCCGGAAATGGACATCGAGCGTAAGATGAACCATGACGTCAGTTTGTTTTTGGTCGCTGAGGTAAACGGTGACGTGGTCGGAACGGTGATGGGCGGTTATGACGGGCATCGCGGGTCTGCTTATTATCTTGGCGTGCATCCAGAGTTTCGTGGGCGTGGGATTGCCAATGCGTTGCTTAATCGGCTGGAGAAAAAGCTGATTGCTCGTGGCTGCCCGAAAATTCAGATCAATGTGCCGGAAGATAACGACATGGTGCTCGGAATGTATGAACGCCTGGGATATGAACACGCCGACGTGCTGAGTCTGGGTAAGCGTTTGATTGAAGATGAAGAGTACTGA", - "dna_sequence_length": 426, - "functions": [ - "GNAT family putative N-acetyltransferase" - ], - "id": "CDS_2414", - "location": [ - [ - "NC_000913", - 2552138, - "-", - 426 - ] - ], - "md5": "179552d779466a8663dfb5da6088101f", - "parent_gene": "", - "protein_md5": "5614f958475d8de6dafbed3580da5892", - "protein_translation": "MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSLFLVAEVNGDVVGTVMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPEDNDMVLGMYERLGYEHADVLSLGKRLIEDEEY", - "protein_translation_length": 141, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2428" - ], - [ - "gene_synonym", - "GI:16130360" - ], - [ - "gene_synonym", - "yfeE" - ], - [ - "gene_synonym", - "GeneID:946916" - ], - [ - "gene_synonym", - "ASAP:ABE-0008032" - ], - [ - "gene_synonym", - "amiA" - ], - [ - "gene_synonym", - "ECK2430" - ], - [ - "gene_synonym", - "b2435" - ], - [ - "gene_synonym", - "NP_416930.1" - ], - [ - "gene_synonym", - "EcoGene:EG11823" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36548" - ] - ], - "dna_sequence": "ATGAGCACTTTTAAACCACTAAAAACACTCACTTCGCGCCGCCAGGTGCTGAAAGCCGGTTTGGCTGCCCTGACGTTGTCAGGAATGTCGCAAGCCATCGCCAAAGACGAACTTTTAAAAACCAGCAACGGACACAGCAAGCCGAAAGCCAAAAAATCTGGCGGCAAACGTGTCGTTGTTCTCGATCCAGGTCACGGCGGAATTGATACCGGAGCGATCGGACGCAACGGTTCGAAAGAAAAACATGTGGTGCTGGCGATTGCTAAAAACGTCCGTTCCATTTTGCGTAATCATGGGATTGATGCGCGTTTAACGCGTTCTGGCGATACGTTTATCCCACTTTACGATCGCGTTGAAATCGCCCATAAACATGGCGCAGATCTGTTTATGTCAATTCATGCCGATGGCTTTACCAACCCGAAAGCTGCCGGTGCTTCGGTATTTGCCCTCTCTAACCGTGGGGCAAGTAGCGCAATGGCGAAATACCTGTCTGAACGCGAAAACCGCGCCGATGAAGTTGCCGGTAAAAAGGCGACTGACAAGGATCACCTATTGCAACAAGTGCTGTTTGATCTGGTGCAAACAGATACCATTAAAAATAGTCTGACGCTCGGCTCGCATATTCTGAAGAAGATTAAGCCGGTGCATAAACTGCACAGCCGCAACACCGAACAAGCGGCATTTGTGGTGTTGAAATCACCGTCGGTTCCTTCGGTGCTGGTGGAAACCTCGTTTATCACCAACCCGGAAGAAGAACGGCTGTTAGGCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAA", - "dna_sequence_length": 870, - "functions": [ - "N-acetylmuramoyl-l-alanine amidase I" - ], - "id": "CDS_2415", - "location": [ - [ - "NC_000913", - 2552352, - "+", - 870 - ] - ], - "md5": "c0add0cb7c493eca3d5f9f83db5b510c", - "parent_gene": "", - "protein_md5": "b353cedc91ac4357fcffac05436368c3", - "protein_translation": "MSTFKPLKTLTSRRQVLKAGLAALTLSGMSQAIAKDELLKTSNGHSKPKAKKSGGKRVVVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARLTRSGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMAKYLSERENRADEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVVLKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYFHWFDNQKAHSKKR", - "protein_translation_length": 289, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "popB" - ], - [ - "gene_synonym", - "JW2429" - ], - [ - "gene_synonym", - "GI:16130361" - ], - [ - "gene_synonym", - "ASAP:ABE-0008034" - ], - [ - "gene_synonym", - "EcoGene:EG12189" - ], - [ - "gene_synonym", - "hemF" - ], - [ - "gene_synonym", - "ECK2431" - ], - [ - "gene_synonym", - "b2436" - ], - [ - "gene_synonym", - "sec" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36553" - ], - [ - "gene_synonym", - "GeneID:946908" - ], - [ - "gene_synonym", - "NP_416931.1" - ] - ], - "dna_sequence": "ATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGATGGCGCAGAATTTGTCGAAGATAGTTGGCAGCGCGAAGCTGGCGGCGGCGGGCGTAGTCGGGTGTTGCGTAATGGTGGTGTTTTCGAACAGGCAGGCGTCAACTTTTCGCATGTCCACGGTGAGGCGATGCCTGCTTCCGCCACCGCTCATCGCCCGGAACTTGCCGGGCGCAGTTTCGAGGCGATGGGCGTTTCACTGGTAGTGCATCCGCATAACCCGTATGTTCCCACCAGCCACGCGAATGTGCGGTTTTTTATTGCCGAAAAACCGGGTGCCGATCCCGTCTGGTGGTTTGGCGGTGGCTTCGACTTAACCCCATTCTATGGTTTTGAAGAAGATGCTATTCACTGGCATCGCACCGCCCGTGACCTGTGCCTGCCATTTGGCGAAGACGTTTATCCCCGTTACAAAAAGTGGTGCGACGAATACTTCTACCTCAAACATCGCAACGAACAGCGCGGTATTGGCGGGCTGTTCTTTGATGACCTGAACACGCCAGATTTCGACCGCTGTTTTGCCTTTATGCAGGCGGTAGGCAAAGGCTACACCGACGCTTATTTACCAATTGTCGAGCGACGGAAAGCGATGGCCTACGGCGAGCGCGAGCGCAATTTCCAGTTATATCGTCGCGGTCGTTATGTCGAGTTCAATCTGGTCTGGGATCGCGGCACGCTGTTTGGCCTGCAAACTGGCGGGCGCACCGAGTCTATCCTGATGTCAATGCCGCCACTGGTACGCTGGGAATATGATTATCAGCCAAAAGATGGCAGCCCAGAAGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAA", - "dna_sequence_length": 900, - "functions": [ - "coproporphyrinogen III oxidase" - ], - "id": "CDS_2416", - "location": [ - [ - "NC_000913", - 2553225, - "+", - 900 - ] - ], - "md5": "5e189cbf6b177f367824ab056b9e80a7", - "parent_gene": "", - "protein_md5": "290773f2e578924a6ead21a0f9af21b8", - "protein_translation": "MKPDAHQVKQFLLNLQDTICQQLTAVDGAEFVEDSWQREAGGGGRSRVLRNGGVFEQAGVNFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYVPTSHANVRFFIAEKPGADPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDEYFYLKHRNEQRGIGGLFFDDLNTPDFDRCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDYQPKDGSPEAALSEFIKVRDWV", - "protein_translation_length": 299, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416932.1" - ], - [ - "gene_synonym", - "EcoGene:EG12190" - ], - [ - "gene_synonym", - "ASAP:ABE-0008036" - ], - [ - "gene_synonym", - "yfeG" - ], - [ - "gene_synonym", - "GI:16130362" - ], - [ - "gene_synonym", - "JW2430" - ], - [ - "gene_synonym", - "ECK2432" - ], - [ - "gene_synonym", - "GeneID:946911" - ], - [ - "gene_synonym", - "b2437" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36547" - ], - [ - "gene_synonym", - "eutR" - ] - ], - "dna_sequence": "ATGAAAAAGACCCGTACAGCCAATTTGCACCATCTTTATCATGAACCCTTACCCGAAAACCTGAAGCTCACGCCGAAGGTCGAAGTGGATAATGTTCATCAACGACAGACAACGGATGTCTATGAACATGCTTTAACGATTACCGCCTGGCAGCAGATTTACGATCAGCTGCATCCGGGCAAGTTTCATGGTGAATTTACGGAAATTCTACTCGATGATATTCAGGTTTTTCGTGAATACACCGGTCTGGCGCTGCGTCAGTCGTGCCTGGTCTGGCCGAACTCGTTCTGGTTTGGCATTCCGGCGACGCGCGGTGAGCAGGGATTTATCGGTTCGCAATGTCTGGGAAGCGCGGAAATCGCCACCCGCCCTGGTGGCACTGAATTTGAACTGAGCACGCCGGATGATTACACGATCCTGGGCGTGGTGCTTTCTGAAGATGTCATCACCCGGCAGGCTAACTTTTTGCATAACCCGGATCGGGTATTACATATGTTGCGTAACCAGTCGGCGCTGGAAGTGAAAGAGCAGCATAAAGCCGCGCTGTGGGGCTTTGTCCAACAGGCGCTGGCGACGTTTTGCGAGAATCCGGAAAATCTCCATCAGCCTGCAGTGCGAAAAGTGCTGGGGGATAATTTGCTAATGGCGATGGGGGCCATGCTGGAAGAAGCGCAACCAATGGTGACGGCGGAAAGCATCAGTCATCAGAGTTACCGTCGATTGCTTTCCCGCGCCCGTGAATATGTGCTGGAAAACATGTCCGAACCGGTGACGGTGCTGGATTTGTGTAATCAACTGCATGTCAGCCGCCGCACGCTACAAAACGCGTTTCACGCTATTTTAGGCATTGGCCCGAACGCGTGGCTGAAACGCATTCGCCTGAACGCCGTACGCCGCGAACTGATAAGTCCGTGGTCGCAAAGTATGACGGTAAAAGACGCCGCCATGCAGTGGGGATTCTGGCATCTGGGGCAATTTGCCACGGATTACCAGCAGCTGTTTTCCGAGAAGCCGTCACTGACGCTGCATCAGCGGATGCGGGAGTGGGGGTGA", - "dna_sequence_length": 1053, - "functions": [ - "eut operon transcriptional activator, AraC family" - ], - "id": "CDS_2417", - "location": [ - [ - "NC_000913", - 2555182, - "-", - 1053 - ] - ], - "md5": "4d9bbeddac11df0dc839bc10c37d26f0", - "parent_gene": "", - "protein_md5": "3f1c9ee2c90589762a0d89496ed741d4", - "protein_translation": "MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRELISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG", - "protein_translation_length": 350, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "eutK" - ], - [ - "gene_synonym", - "GI:90111436" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76540" - ], - [ - "gene_synonym", - "EcoGene:EG14170" - ], - [ - "gene_synonym", - "NP_416933.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0008039" - ], - [ - "gene_synonym", - "ECK2433" - ], - [ - "gene_synonym", - "JW2431" - ], - [ - "gene_synonym", - "yffI" - ], - [ - "gene_synonym", - "GeneID:946912" - ], - [ - "gene_synonym", - "b2438" - ] - ], - "dna_sequence": "ATGATCAATGCACTGGGATTGCTGGAAGTGGACGGCATGGTCGCCGCGATAGATGCAGCGGATGCCATGCTCAAAGCAGCTAACGTTCGTCTGCTCAGTCACGAAGTGCTTGACCCTGGTCGCTTAACGCTGGTGGTGGAAGGCGATCTGGCGGCGTGTCGTGCGGCGCTGGACGCAGGTTGTGCTGCCGCGATGCGTACCGGGCGTGTCATCAGCCGCAAGGAGATCGGTCGGCCAGACGATGACACCCAGTGGCTGGTTACTGGCTTTAACCGCCAGCCGAAGCAACCCGTAAGGGAACCCGACGCGCCAGTTATCGTCGCGGAATCTGCTGACGAGTTGTTGGCGCTGTTAACATCAGTACGTCAGGGAATGACGGCAGGAGAAGTGGCTGCCCACTTTGGCTGGCCGCTGGAAAAAGCCAGAAATGCGCTCGAACAGCTCTTTTCTGCCGGGACGTTACGTAAACGCAGTAGTCGTTATCGTCTCAAGCCCCATTAA", - "dna_sequence_length": 501, - "functions": [ - "putative ethanol utilization carboxysome structural protein" - ], - "id": "CDS_2418", - "location": [ - [ - "NC_000913", - 2555728, - "-", - 501 - ] - ], - "md5": "4f53e663fdc545c5c1a407549b0baa47", - "parent_gene": "", - "protein_md5": "548ebbc11ef0154a0be78c9ffc762231", - "protein_translation": "MINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTLVVEGDLAACRAALDAGCAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVREPDAPVIVAESADELLALLTSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSRYRLKPH", - "protein_translation_length": 166, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130364" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76541" - ], - [ - "gene_synonym", - "eutL" - ], - [ - "gene_synonym", - "GeneID:946914" - ], - [ - "gene_synonym", - "ECK2434" - ], - [ - "gene_synonym", - "yffJ" - ], - [ - "gene_synonym", - "JW2432" - ], - [ - "gene_synonym", - "EcoGene:EG14171" - ], - [ - "gene_synonym", - "ASAP:ABE-0008041" - ], - [ - "gene_synonym", - "b2439" - ], - [ - "gene_synonym", - "NP_416934.1" - ] - ], - "dna_sequence": "ATGCCAGCTTTAGATTTGATTCGACCGTCTGTCACCGCTATGCGGGTGATTGCCTCCGTTAACGCCGATTTTGCGCGTGAACTGAAATTGCCGCCGCATATTCGTAGCCTCGGTCTGATTTCTGCCGACTCCGATGACGTCACCTACATTGCCGCTGATGAAGCGACCAAGCAGGCGATGGTGGAAGTGGTGTATGGCCGCTCGCTATATGCGGGCGCTGCACACGGCCCGTCACCGACTGCCGGTGAAGTGCTGATTATGCTTGGTGGGCCAAACCCGGCGGAAGTGCGTGCAGGTCTGGATGCGATGATTGCGCATATTGAAAATGGCGCAGCTTTCCAGTGGGCTAATGACGCGCAAGATACGGCATTCCTGGCACATGTAGTTTCGCGTACCGGTTCTTATCTCTCATCAACCGCCGGGATCACGCTTGGCGATCCGATGGCGTATCTGGTGGCACCGCCGCTGGAAGCGACCTATGGCATTGATGCAGCCCTGAAGTCTGCCGACGTACAGCTGGCGACCTATGTCCCGCCACCGTCTGAAACCAACTACTCGGCAGCATTTTTAACCGGTAGCCAGGCAGCGTGTAAAGCAGCCTGTAACGCCTTTACCGATGCAGTGCTGGAAATCGCGCGTAATCCAATCCAGCGTGCGTAA", - "dna_sequence_length": 660, - "functions": [ - "putative ethanol utilization carboxysome structural protein" - ], - "id": "CDS_2419", - "location": [ - [ - "NC_000913", - 2556400, - "-", - 660 - ] - ], - "md5": "294b20752a5bc7f172f71c29e1d139fb", - "parent_gene": "", - "protein_md5": "2004aada7375fe5eefaf26bacaa39084", - "protein_translation": "MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130365" - ], - [ - "gene_synonym", - "EcoGene:EG50007" - ], - [ - "gene_synonym", - "eutC" - ], - [ - "gene_synonym", - "ECK2435" - ], - [ - "gene_synonym", - "JW2433" - ], - [ - "gene_synonym", - "GeneID:946925" - ], - [ - "gene_synonym", - "b2440" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P19636" - ], - [ - "gene_synonym", - "ASAP:ABE-0008043" - ], - [ - "gene_synonym", - "NP_416935.1" - ] - ], - "dna_sequence": "ATGGATCAAAAACAGATTGAAGAAATTGTACGCAGCGTGATGGCGTCAATGGGACAAGCGGCCCCCGCGCCGTCAGAAGCAAAGTGCGCCACCACCAACTGTGCGGCACCGGTGACCTCGGAAAGCTGTGCGCTGGATTTAGGTTCCGCTGAAGCAAAAGCGTGGATTGGTGTTGAAAATCCGCATCGCGCAGACGTATTAACAGAACTGCGCCGCAGCACCGTGGCCCGCGTTTGTACCGGTCGTGCCGGTCCGCGTCCACGTACGCAGGCGCTGCTGCGTTTCCTGGCCGATCACTCTCGTTCGAAAGATACCGTACTGAAAGAAGTGCCGGAAGAGTGGGTGAAAGCGCAGGGCTTGCTGGAAGTACGCTCTGAAATTAGCGACAAAAATCTCTACCTGACTCGCCCGGATATGGGCCGCCGCCTGTGTGCAGAAGCTGTTGAAGCGCTGAAAGCGCAGTGTGTTGCCAATCCGGACGTACAGGTCGTTATTTCTGATGGCCTGTCAACTGATGCGATCACCGTGAACTACGAAGAGATCCTGCCACCGCTGATGGCGGGCCTGAAACAGGCCGGGCTGAAAGTCGGTACACCATTCTTTGTTCGTTATGGTCGCGTGAAGATTGAAGATCAGATCGGTGAGATCCTCGGCGCGAAAGTAGTGATCCTGCTGGTGGGCGAACGTCCGGGGTTGGGTCAGTCAGAAAGCCTCTCCTGCTACGCCGTTTACTCGCCGCGTATGGCGACCACCGTTGAGGCCGATCGCACCTGTATCTCTAACATTCACCAGGGCGGCACGCCGCCGGTTGAAGCCGCAGCCGTCATTGTGGATTTGGCGAAACGTATGCTGGAGCAGAAAGCATCCGGCATCAACATGACCCGATAA", - "dna_sequence_length": 888, - "functions": [ - "ethanolamine ammonia-lyase, small subunit (light chain)" - ], - "id": "CDS_2420", - "location": [ - [ - "NC_000913", - 2557297, - "-", - 888 - ] - ], - "md5": "4e4459a3f8740483f08e1ffb47e9e1da", - "parent_gene": "", - "protein_md5": "fb13c61731e75f4a875ed2bacd1b7153", - "protein_translation": "MDQKQIEEIVRSVMASMGQAAPAPSEAKCATTNCAAPVTSESCALDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTGRAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVKAQGLLEVRSEISDKNLYLTRPDMGRRLCAEAVEALKAQCVANPDVQVVISDGLSTDAITVNYEEILPPLMAGLKQAGLKVGTPFFVRYGRVKIEDQIGEILGAKVVILLVGERPGLGQSESLSCYAVYSPRMATTVEADRTCISNIHQGGTPPVEAAAVIVDLAKRMLEQKASGINMTR", - "protein_translation_length": 295, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111437" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEJ6" - ], - [ - "gene_synonym", - "eutB" - ], - [ - "gene_synonym", - "NP_416936.4" - ], - [ - "gene_synonym", - "GeneID:946924" - ], - [ - "gene_synonym", - "b2441" - ], - [ - "gene_synonym", - "JW2434" - ], - [ - "gene_synonym", - "ASAP:ABE-0008046" - ], - [ - "gene_synonym", - "ECK2436" - ], - 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"ATGAAACTAAAGACCACATTGTTCGGCAATGTATATCAGTTTAAGGATGTAAAAGAGGTGCTGGCTAAAGCCAACGAACTGCGTTCGGGGGATGTGCTGGCGGGCGTCGCAGCGGCAAGCTCACAGGAGCGCGTGGCGGCAAAGCAGGTGTTGTCGGAAATGACCGTAGCGGACATCCGCAATAATCCGGTGATTGCCTATGAAGATGACTGCGTGACGCGGCTGATTCAGGACGATGTTAACGAAACGGCCTACAACCAGATTAAAAACTGGAGCATCAGCGAACTGCGTGAGTATGTGCTGAGCGATGAAACCAGCGTGGACGACATTGCCTTTACCCGCAAAGGGCTGACCTCGGAAGTGGTCGCGGCGGTAGCGAAGATTTGCTCCAACGCGGACCTGATCTACGGCGCGAAGAAAATGCCGGTAATCAAAAAGGCCAATACCACCATCGGTATTCCGGGCACCTTTAGCGCCCGTTTGCAGCCAAATGACACCCGTGACGACGTGCAAAGTATCGCCGCGCAAATCTACGAAGGGCTTTCCTTCGGGGTGGGCGATGCGGTGATCGGCGTTAACCCGGTGACTGACGACGTGGAAAACTTAAGCCGCGTGTTGGATACCATCTATGGCGTGATCGACAAATTCAACATCCCAACTCAGGGCTGTGTACTGGCGCACGTCACCACCCAGATCGAAGCGATCCGTCGTGGCGCACCGGGCGGGCTGATTTTCCAGAGTATCTGTGGCAGCGAAAAAGGGCTGAAAGAGTTTGGCGTGGAGCTGGCGATGCTCGACGAAGCGCGCGCAGTGGGCGCGGAGTTCAACCGTATCGCCGGGGAAAACTGCCTCTACTTCGAAACCGGACAAGGCTCTGCGCTATCCGCTGGCGCTAACTTCGGCGCAGACCAGGTAACGATGGAAGCACGTAACTACGGGCTGGCGCGTCATTACGATCCGTTTATCGTCAACACCGTGGTCGGCTTTATTGGGCCGGAGTATCTCTACAACGACCGCCAGATTATCCGTGCTGGCTTAGAAGATCACTTTATGGGCAAGCTGAGCGGCATCTCTATGGGCTGTGACTGCTGTTATACCAACCACGCTGACGCTGACCAGAACCTCAACGAAAACCTGATGATCCTGCTCGCCACCGCAGGCTGCAACTACATCATGGGGATGCCGCTGGGTGATGACATCATGCTCAACTACCAGACCACCGCATTCCACGATACCGCCACTGTGCGTCAGTTACTCAACCTGCGCCCGTCACCGGAGTTTGAACGCTGGCTGGAAAGCATGGGCATTATGGCAAACGGTCGCCTGACCAAACGGGCGGGCGATCCGTCACTGTTCTTCTGA", - "dna_sequence_length": 1362, - "functions": [ - "ethanolamine ammonia-lyase, large subunit, heavy chain" - ], - "id": "CDS_2421", - "location": [ - [ - "NC_000913", - 2558679, - "-", - 1362 - ] - ], - "md5": "861faadc2eb61001aa602f7a9a814182", - "parent_gene": "", - "protein_md5": "221493648e7a2ad71b262251e251b3ee", - "protein_translation": "MKLKTTLFGNVYQFKDVKEVLAKANELRSGDVLAGVAAASSQERVAAKQVLSEMTVADIRNNPVIAYEDDCVTRLIQDDVNETAYNQIKNWSISELREYVLSDETSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGAKKMPVIKKANTTIGIPGTFSARLQPNDTRDDVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFNIPTQGCVLAHVTTQIEAIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEFNRIAGENCLYFETGQGSALSAGANFGADQVTMEARNYGLARHYDPFIVNTVVGFIGPEYLYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYIMGMPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDPSLFF", - "protein_translation_length": 453, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76542" - ], - [ - "gene_synonym", - "ECK2437" - ], - [ - "gene_synonym", - "NP_416937.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0008052" - ], - [ - "gene_synonym", - "b2442" - ], - [ - "gene_synonym", - "GeneID:946923" - ], - [ - "gene_synonym", - "GI:145698295" - ], - [ - "gene_synonym", - "EcoGene:EG14172" - ], - [ - "gene_synonym", - "intZ" - ] - ], - "dna_sequence": "TTGAGCAAGACACCACTCACAGCAAAGGCCATAGACGCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCGATTCACTGACGCCGGGGCTGTTTTTGCTGGTGCATCCCAACGGTTCGAAATACTGGCGATTCAGGTATTGGCTGAATAAACGAGAGTTTTTGCAGGCCATTGGAGTTTACCCGCTAATCACACTCAAAGAAGCACGCAGGCGCGCCACGGAGAGCAGATCCCTTATTGCCAATGGAATTAACCCAGTGGAACAAGCCCGCAAGGAAAAAGCCATTGATGCGCTCAACATGGCGGCAGGATTTAAGAAGGTGGCGGAAGACTGGTTTGCTACCAGGGTTGGAGGGTGGTCGGAATCCTATGCAAAACAGGTCAGATCGGCACTAGAAAAAGACGTCTATCCGGTACTTGGCAAGCGGTCGATTGTCGATATAACCGCCCGTGACGTGCTGGCATTACTCCAGAAGAAAGAACGTACCGCACCGGAGCAGGCCCGCAAGCTACGCCGGCGCATCGGTGAGATCTTCAAGTTTGCCGTTATCACCGAACTGGTAACGAGGAATCCGGTTGCAGATCTTGATACGGCACTGAAGGCCCGCCGACCTGGTCACAACGCGTGGATACCGATTAGTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAACCCTTGTCAGCCAGCGCGATACTTAAAGCGCTTGAGCGTATCGGGTACAAGTCGATAGCCACAGGCCACGGCTGGCGCACAACGTTCAGCACCGCACTTAACGAATCAGGCAGATACTCGCCGGATTGGATTGAGATCCAACTAGCCCACGTCCCGAAGGGAATAAGGGGCGTTTATAACCAGGCTGCCTACCTGAAGCAACGGCGAGCAATGATGCAGGATTACGCCGACGCTATTGATTCAATATTGGCAGGTAACGGCAATCCTCTAGAACCGGAATGA", 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- "gene_synonym", - "b2443" - ], - [ - "gene_synonym", - "ASAP:ABE-0008055" - ], - [ - "gene_synonym", - "GeneID:946922" - ], - [ - "gene_synonym", - "NP_416938.1" - ], - [ - "gene_synonym", - "EcoGene:EG14173" - ] - ], - "dna_sequence": "ATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCCGGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTTTAAACAAAATTAACGAGTTACGGAATAAAGCACCCAAAAACGAAGAGACTAAACACGAAGAACACACGCCAGATAATCACGAGGAAACAGATCATCACGAGGCAAAACAGCAGGAGCAAGCCTGGCGTGGCAACCTGCGCTACCTGGACACATTAAACCGACTTGATGAAGTATTGCCCCGCAAACTGTACGAAAGATGGGAGAAAGAACATACAGTCAACGACGAGGCTGTGCTACGTGCTCTTTGTTACTTCGCTGGTACTGGCAAAAACTCACAGTTGGGATGGTGCAGGGTTGGTAGGGGAACAATCGACAAACGAGCCAGGCTATCAAAAAACACGGTTAAAAAATGCCTCGATCGTCTGGTCAACCACTTCAAACTTGTTGAGCGTACTGAAGGCTATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAA", - "dna_sequence_length": 642, - "functions": [ - "CPZ-55 prophage", - "uncharacterized protein" - ], - "id": "CDS_2423", - "location": [ - [ - "NC_000913", - 2560257, - "+", - 642 - ] - ], - "md5": "6d3d4548ba04ae3277e1fd25ac16cabb", - "parent_gene": "", - "protein_md5": "5fd15fa04c75f89abece871ea5c86e73", - "protein_translation": "MFATKDPEFENRINTNKSPRNAATCRGRYEKQAKGEFLMSDMLAVEQETNNDVRQFLNKINELRNKAPKNEETKHEEHTPDNHEETDHHEAKQQEQAWRGNLRYLDTLNRLDEVLPRKLYERWEKEHTVNDEAVLRALCYFAGTGKNSQLGWCRVGRGTIDKRARLSKNTVKKCLDRLVNHFKLVERTEGYIPGSAERECNEYQLLFKPYNMK", - "protein_translation_length": 213, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76544" - ], - [ - "gene_synonym", - "ECK2439" - ], - [ - "gene_synonym", - "NP_416939.1" - ], - [ - "gene_synonym", - "yffM" - ], - [ - "gene_synonym", - "GI:16130369" - ], - [ - "gene_synonym", - "GeneID:946921" - ], - [ - "gene_synonym", - "b2444" - ], - [ - "gene_synonym", - "ASAP:ABE-0008061" - ], - [ - "gene_synonym", - "EcoGene:EG14174" - ] - ], - "dna_sequence": "GTGATGGTTATCCGCCACGAATGTCCGTCATATTGCATTGCGCAGAAACGCGTGGCACTGAGGGAGTTTTCCGAATTAGTTTTGGGGACCCTTTCCCTGCTTCTGGAGCAAAAGACGAACGGCAAATGCAGTGCTTCCTTGTACGACTGCAGCGAAGAAGAAAAGCTGTTTGTTAAGCGCCTGAAGTTAATCAAAGCGGATATCCACGCCCAGCTGAAGGCCTGTGATTGCGATATTTCTGAATGA", - "dna_sequence_length": 246, - "functions": [ - "CPZ-55 prophage", - "uncharacterized protein" - ], - "id": "CDS_2424", - "location": [ - [ - "NC_000913", - 2561368, - "+", - 246 - ] - ], - "md5": "9f6c362b8a499459e8d7de06272eaf5b", - "parent_gene": "", - "protein_md5": "a3d80a77b1977971eb17e5595ce660f5", - "protein_translation": "MMVIRHECPSYCIAQKRVALREFSELVLGTLSLLLEQKTNGKCSASLYDCSEEEKLFVKRLKLIKADIHAQLKACDCDISE", - "protein_translation_length": 81, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76545" - ], - [ - "gene_synonym", - "yffN" - ], - [ - "gene_synonym", - "NP_416940.2" - ], - [ - "gene_synonym", - "b2445" - ], - [ - "gene_synonym", - "ASAP:ABE-0008063" - ], - [ - "gene_synonym", - "GeneID:946930" - ], - [ - "gene_synonym", - "EcoGene:EG14175" - ], - [ - "gene_synonym", - "ECK2440" - ], - [ - "gene_synonym", - "GI:145698296" - ] - ], - "dna_sequence": "ATGAAACACGTTTTTAAATATCTTGATTTTGCAGAAGACCGCGAACACGCAGAATCAGTGGCGACCAAAGAGTTAAAACTGGACCACGTAGAAAAATTCGCTATCCGCGATCTAGCCAATGATATCAAAGAGCGTGGGTGTGTTGAGCTTGTCCAGCCTGGTGGATTCGATGAGCTGGTTCAGATCTATGAGGCCGGAGGCGATGGAATAGAGCCACTCAATTGTGGAATCGAATCAAGGAAGGTGGCAATTGCTGCCCTGCTTCGCGTCATGCGTGAACCAGACTTTCAATGCCTGGAAATGGTTCACGAAATCATAAGAATTGCTAGAGATTTGGAAGCGCCAGTTGACGCTCCGTTAGATTGCTAA", - "dna_sequence_length": 369, - "functions": [ - "CPZ-55 prophage", - "uncharacterized protein" - ], - "id": "CDS_2425", - "location": [ - [ - "NC_000913", - 2561625, - "+", - 369 - ] - ], - "md5": "54b9943b0153b501c859b1c3f7e16bdb", - "parent_gene": "", - "protein_md5": "38b8c32435feba5953ea4addd05867d3", - "protein_translation": "MKHVFKYLDFAEDREHAESVATKELKLDHVEKFAIRDLANDIKERGCVELVQPGGFDELVQIYEAGGDGIEPLNCGIESRKVAIAALLRVMREPDFQCLEMVHEIIRIARDLEAPVDAPLDC", - "protein_translation_length": 122, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416941.1" - ], - [ - "gene_synonym", - "GI:16130371" - ], - [ - "gene_synonym", - "yffO" - ], - [ - "gene_synonym", - "ASAP:ABE-0008066" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76546" - ], - [ - "gene_synonym", - "b2446" - ], - [ - "gene_synonym", - "EcoGene:EG14176" - ], - [ - "gene_synonym", - "ECK2441" - ], - [ - "gene_synonym", - "GeneID:946929" - ] - ], - "dna_sequence": "ATGGAAGGCGAACTGATAGAAAACAATGGGTTAGACATTTATGACACCAGCGAAACACCGAAAAAGCGCGGTCGGCCAGCTAAATATAATGAAAAAATAGCAACGCAAATCGTCCTATTGGTAAGCGAAGGTTATAGTTTGCGCAAGATCAGCATGATGCCAGGGATGCCGAGCCACCGTCAGATGATGCGCTGGCAACTGGAGCATATGGACTTCAGGGAAGGGATAGCCTGGATGTCGTGGCTATGGTGCGCTGAAGCTGGCCGACGTGCCGTCGAGATAATCGACGAGGTTGATATAAACGCAGAGGATGGGCCGAAGCAGTTGCGCAAAGCAGAAGCAAAGGCAAAGGCACTACTGGCAGCAGCCAAGCTGAATAGTTTGAAACATTCACCATTTGGAGATGACAAACAATGA", - "dna_sequence_length": 417, - "functions": [ - "CPZ-55 prophage", - "uncharacterized protein" - ], - "id": "CDS_2426", - "location": [ - [ - "NC_000913", - 2562111, - "+", - 417 - ] - ], - "md5": "7b8eb5b8ab20b44dd43feb92db0f8ad5", - "parent_gene": "", - "protein_md5": "f3de6356c83eadb5fdf1a6aed4ae9e79", - "protein_translation": "MEGELIENNGLDIYDTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGDDKQ", - "protein_translation_length": 138, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76547" - ], - [ - "gene_synonym", - "GeneID:946928" - ], - [ - "gene_synonym", - "GI:16130372" - ], - [ - "gene_synonym", - "b2447" - ], - [ - "gene_synonym", - "yffP" - ], - [ - "gene_synonym", - "ECK2442" - ], - [ - "gene_synonym", - "EcoGene:EG14177" - ], - [ - "gene_synonym", - "NP_416942.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008069" - ] - ], - "dna_sequence": "ATGAGCCTGATCCGCACTGAAACCAGAGACACAAAACGCGCAGCTGACCCACTGCACGACCTGCGTAGCAAGCCGTTTTCTGAGTGGGGCGAAGATGAAATCAGGCGTTTTAATCTGATAGACGCGCTTCTTGAGTTTGTCTACACAGACACATCCAGCCCGTTCGGTATCGGCATGACCTTCGATTACACGGAGTGCTGGGAAATTGGTGTTCGTGACGACTGCCTGGTAATGACACGCGTTAAGCCGGTGCATCCAGAATATGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGTGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGA", - "dna_sequence_length": 594, - "functions": [ - "CPZ-55 prophage", - "uncharacterized protein" - ], - "id": "CDS_2427", - "location": [ - [ - "NC_000913", - 2562524, - "+", - 594 - ] - ], - "md5": "1a64e0de865df0ce10c665e277b6e450", - "parent_gene": "", - "protein_md5": "df103efa85fcaeada99de04539dd2833", - "protein_translation": "MSLIRTETRDTKRAADPLHDLRSKPFSEWGEDEIRRFNLIDALLEFVYTDTSSPFGIGMTFDYTECWEIGVRDDCLVMTRVKPVHPEYAKHWNMKGVMNDKTRFHADKWVGYSKVLAWVSLSHKDTFTGAKRFQYFQTMYDMERQINANLPVGGLPNVDTERTGKLFQRDDFSEDSHANDPKLVGDDYVPQAPEQIN", - "protein_translation_length": 197, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008072" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76548" - ], - [ - "gene_synonym", - "GeneID:946927" - ], - [ - "gene_synonym", - "NP_416943.2" - ], - [ - "gene_synonym", - "EcoGene:EG14178" - ], - [ - "gene_synonym", - "yffQ" - ], - [ - "gene_synonym", - "ECK2443" - ], - [ - "gene_synonym", - "b2448" - ], - [ - "gene_synonym", - "GI:145698297" - ] - ], - "dna_sequence": "ATGAAACTTTTAATCGCAATCATCCTGATGGTGCTGACTGGTGTTTGCTTTGCAGATGTTGGTGATTACAGGCTGAACGGGGAGGATAACGCAAGAATTGAATCAGTCGTTACTGATAACTGTGAAAAAACAGCCGTATTGGTAGGCGGTGACAGGCTTGCGAGGGTTGAGATCGAATATATAGCGACATTGTGCAAGCCGGTGGCTTTGGTGATTATTTACGACAGATTTGACGATATAGCGGCAATCCCTCTTAAGGTGACGTTGAAAAAGGTATTGAAAGAGAATAGCGATGAAAAGATTAACCTATTGAACAAGATGGGGGATCTGGCTGGTCGTATCGTTGCAGAGCAGTATTTAGGCATGAGTTTTGAGTAA", - "dna_sequence_length": 378, - "functions": [ - "CPZ-55 prophage", - "uncharacterized protein" - ], - "id": "CDS_2428", - "location": [ - [ - "NC_000913", - 2563592, - "+", - 378 - ] - ], - "md5": "816a642b7af44659806a807e7acedb23", - "parent_gene": "", - "protein_md5": "eb8788209b368a6895ff498918a5ed27", - "protein_translation": "MKLLIAIILMVLTGVCFADVGDYRLNGEDNARIESVVTDNCEKTAVLVGGDRLARVEIEYIATLCKPVALVIIYDRFDDIAAIPLKVTLKKVLKENSDEKINLLNKMGDLAGRIVAEQYLGMSFE", - "protein_translation_length": 125, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2444" - ], - [ - "gene_synonym", - "NP_416944.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76549" - ], - [ - "gene_synonym", - "yffR" - ], - [ - "gene_synonym", - "GeneID:946931" - ], - [ - "gene_synonym", - "b2449" - ], - [ - "gene_synonym", - "ASAP:ABE-0008074" - ], - [ - "gene_synonym", - "GI:16130374" - ], - [ - "gene_synonym", - "EcoGene:EG14179" - ] - ], - "dna_sequence": "ATGAAAGTGTTAGGTAATATTTTATGGTGGGCTTTTGTTGGTTTCATGGCTTACGCCACTTTGATTAAGCCGGACAACACTGATCCAGCTGTTGTGAACTATGAAGAGCCTTTGCCTATGGAGCTTGCCAACTATGGCGAACCAGGTGAAGGGGCGAAAATCATGAATGCCGCAAAAATAATGGGTCGCGACTACGCATGGAAACATGTAAAAGAAGACAGGTTGCCATGTCTGTTTGCCGCCGGGGTTGTTGCTGATAACATCCTGGTAAAATACCATTTCAGCAATGAAACTGAGTTCAAACTTAAAGCGGCAGCGGTCAGAGAATGCGCCAACGTAGCAGAAAACAACGGCTTTGTTTTGGTAGGTAGAGTATTTGAAAAACGTAATTGA", - "dna_sequence_length": 393, - "functions": [ - "CPZ-55 prophage", - "uncharacterized protein" - ], - "id": "CDS_2429", - "location": [ - [ - "NC_000913", - 2563980, - "+", - 393 - ] - ], - "md5": "fab57485c1474eb0c5a34cf73d1686f0", - "parent_gene": "", - "protein_md5": "65348cb43cf62e6018c5616e39f98f99", - "protein_translation": "MKVLGNILWWAFVGFMAYATLIKPDNTDPAVVNYEEPLPMELANYGEPGEGAKIMNAAKIMGRDYAWKHVKEDRLPCLFAAGVVADNILVKYHFSNETEFKLKAAAVRECANVAENNGFVLVGRVFEKRN", - "protein_translation_length": 130, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946932" - ], - [ - "gene_synonym", - "NP_416945.2" - ], - [ - "gene_synonym", - "b2450" - ], - [ - "gene_synonym", - "GI:145698298" - ], - [ - "gene_synonym", - "EcoGene:EG14180" - ], - [ - "gene_synonym", - "yffS" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76550" - ], - [ - "gene_synonym", - "ASAP:ABE-0008077" - ], - [ - "gene_synonym", - "ECK2445" - ] - ], - "dna_sequence": "ATGAGTTACGAAATCAAAATTTGCGACATCCTCAAAGGCGCTGCGATGGAAGGACAATATAAGGGCGCTCAACGTGGGGCCAAATGCGAGGAGATCGCAAACGAGTTAACTCGCCGGGGAGTTAAAAACAACAAGGGAGAGGTTATTACTAAGGGCGGCGTTAGCCATTGGCTGGAAGGTAGACGGGAGCCAAATTTCGACACTCTGGCTGAACTGTGCGACATGTTCGGCGTTTATGCCCTGATGCCGATGCGTGGCGGTAAATGGATTCGAGTTCACCCGGAAGACCGTGGAGAAATGGAATTACGCGAGGCTGTAGCTGAACGAGATGCTATTATCGACGACCTGAAGGCCCGTATCGCTGAGCTTGAGGCGGCACTAGCAAATAAACAAGTCCCAGCAGAAGCGGAAGAGATGGGAGGTGAAAAAGTGGAAGAAGTGGCAGCAGAGCAAGCGCCCAACGATGAAAAAGAGATGGGAGCTAAGGAGTGGGTTAACCCGAACCCGAAAAAATACAGCGTCGGCATGTTGTGTCAGGTACTGGCTGCAATGGGCGGCGAATACCTGGGCAACAACGCAGGGTTACAGCAGAAGATCACTGTGTTGGATAACGACGGCAACCGGAAGCCAATCAGTAACGGCGCGTTTTATCGACTGATTGAGCAGGCCAAAGGGAGAGGATTGATTAGCGTTGAACAGGAAATCAAACACAAGAAAGACGAAAACGGCAACCAGATCGGCAAAGGCAAGAAAGGTGACAAGCTGATAACTTTGCTTCCCAACTGGATTGATAAGCTGGGAGACGAATAA", - "dna_sequence_length": 810, - "functions": [ - "CPZ-55 prophage", - "uncharacterized protein" - ], - "id": "CDS_2430", - "location": [ - [ - "NC_000913", - 2564523, - "+", - 810 - ] - ], - "md5": "261ce8e4356a458a6f4b77ee51b25697", - "parent_gene": "", - "protein_md5": "4394348181a8fc30e0db5ea0cd4256b1", - "protein_translation": "MSYEIKICDILKGAAMEGQYKGAQRGAKCEEIANELTRRGVKNNKGEVITKGGVSHWLEGRREPNFDTLAELCDMFGVYALMPMRGGKWIRVHPEDRGEMELREAVAERDAIIDDLKARIAELEAALANKQVPAEAEEMGGEKVEEVAAEQAPNDEKEMGAKEWVNPNPKKYSVGMLCQVLAAMGGEYLGNNAGLQQKITVLDNDGNRKPISNGAFYRLIEQAKGRGLISVEQEIKHKKDENGNQIGKGKKGDKLITLLPNWIDKLGDE", - "protein_translation_length": 269, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008079" - ], - [ - "gene_synonym", - "b2451" - ], - [ - "gene_synonym", - "JW2435" - ], - [ - "gene_synonym", - "eutA" - ], - [ - "gene_synonym", - "GI:16130376" - ], - [ - "gene_synonym", - "GeneID:946937" - ], - [ - "gene_synonym", - "yffT" - ], - [ - "gene_synonym", - "EcoGene:EG14181" - ], - [ - "gene_synonym", - "NP_416946.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76551" - ], - [ - "gene_synonym", - "ECK2446" - ] - ], - "dna_sequence": "GTGAACACTCGCCAGCTATTGAGCGTCGGTATCGATATCGGCACCACCACCACCCAGGTGATTTTCTCCCGGCTGGAGCTGGTTAACCGTGCGGCGGTGTCGCAGGTGCCGCGCTACGAATTCATTAAACGCGAAATTAGCTGGCAAAGTCCGGTGTTCTTTACCCCTGTCGATAAACAGGGCGGTTTAAAAGAAGCGGAACTGAAAACCTTAATACTCGAGCAATATCATGCTGCGGGTATTGAGCCGGAAAGCGTTGATTCTGGTGCCATCATCATCACCGGTGAAAGCGCGAAAACCCGCAATGCTCGCCCGGCGGTGATGGCGCTCTCTCAGTCGCTGGGCGATTTTGTCGTTGCCAGCGCCGGGCCGCACCTCGAATCCGTGATCGCCGGTCACGGAGCCGGGGCACAAACCCTTTCTGAACAACGGCTGTGTCGGGTACTGAATATCGACATCGGCGGTGGCACCGCGAACTACGCCCTGTTCGATGCCGGAAAAATCAGCGGCACTGCCTGCCTCAACGTCGGTGGTCGCCTGCTGGAAACCGACAGCCACGGGCGCGTGGTTTACGCTCATAAACCGGGGCAGATGATTGTGGATGAGTGCTTCGGTGCAGGCACCGACGCCCGTTCGCTGACCGGCGCGCAGCTGGTGCAGGTGACCCGGCGGATGGCAGAACTGATTGTCGAAGTGATTGACGGAACGCTCTCACCGCTCGCGCAGGCATTGATGCAAACCGGTTTGCTGCCCGCAGGTGTTACGCCCGAAATCATTACGCTTTCTGGCGGCGTGGGCGAATGTTATCGCCACCAGCCCGCCGACCCGTTCTGTTTTGCCGATATTGGCCCGCTGCTGGCAACTGCGCTGCATGACCATCCGCGCCTGCGTGAGATGAACGTACAGTTTCCGGCGCAAACCGTGCGCGCCACGGTGATTGGCGCGGGCGCGCATACCCTTTCGCTCTCTGGCAGCACAATCTGGCTTGAGGGCGTACAACTGCCGCTGCGCAATTTGCCGGTGGCGATCCCGATTGATGAAACGGATCTGGTGGGGGCCTGGCAACAGGCGCTGATTCAGCTGGATCTTGATCCCAAAACTGACGCGTACGTGCTGGCGCTTCCCGCCTCGCTGCCTGTGCGTTACGCCGCGGTACTGACGGTCATCAACGCGTTGGTCGATTTCGTCGCGCGTTTTCCGAATCCGCATCCCCTGCTGGTGGTGGCCGGGCAGGACTTTGGTAAAGCTCTGGGCATGTTGTTGCGCCCACAGCTACAACAACTCCCGTTGGCAGTCATTGACGAAGTGATTGTCCGCGCGGGGGACTATATCGACATTGGTACGCCTCTTTTTGGCGGATCGGTTGTGCCGGTGACGGTGAAATCACTCGCATTTCCTTCCTGA", 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"JW2436" - ], - [ - "gene_synonym", - "GI:16130377" - ], - [ - "gene_synonym", - "b2452" - ], - [ - "gene_synonym", - "yffU" - ], - [ - "gene_synonym", - "ASAP:ABE-0008081" - ], - [ - "gene_synonym", - "EcoGene:EG14182" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76552" - ], - [ - "gene_synonym", - "NP_416947.1" - ], - [ - "gene_synonym", - "ECK2447" - ] - ], - "dna_sequence": "ATGGGAATTAACGAAATCATCATGTACATCATGATGTTCTTTATGCTGATAGCTGCCGTAGACAGGATCCTGTCGCAGTTCGGCGGTTCTGCTCGTTTCCTCGGTAAGTTCGGTAAAAGTATCGAAGGATCAGGCGGTCAGTTCGAAGAAGGCTTTATGGCAATGGGCGCACTGGGCCTGGCGATGGTCGGTATGACCGCGCTGGCACCGGTACTGGCTCACGTTCTCGGGCCGGTAATTATTCCGGTTTACGAAATGCTCGGCGCTAACCCATCGATGTTCGCCGGAACACTGCTGGCGTGCGATATGGGCGGCTTCTTCCTCGCCAAAGAGCTGGCGGGCGGCGACGTAGCCGCGTGGCTATACTCTGGGTTAATTCTCGGGTCGATGATGGGGCCAACGATTGTGTTTTCCATTCCGGTGGCGCTCGGCATTATCGAACCTTCTGACCGTCGTTATCTGGCGCTCGGCGTGCTGGCGGGCATTGTGACCATTCCGATTGGTTGTATCGCTGGTGGTCTGGTTGCTATGTACTCCGGTGTGCAGATCAACGGCCAGCCGGTGGAATTCACTTTCGCCCTGATCCTGATGAACATGATCCCGGTGATCATTGTTGCGATTCTGGTGGCGCTGGGGCTGAAATTCATCCCGGAAAAAATGATCAACGGCTTCCAGATCTTCGCCAAATTCCTCGTTGCATTGATCACCCTCGGTCTTGCCGCTGCGGTAGTGAAATTCCTGCTTGGCTGGGAACTGATCCCCGGTCTGGATCCTATCTTTATGGCCCCTGGCGATAAACCCGGTGAGGTGATGCGCGCCATTGAAGTTATCGGTTCTATCTCCTGCGTTCTGTTAGGGGCGTATCCGATGGTGCTGCTGCTGACTCGCTGGTTTGAAAAACCGCTGATGAGCGTCGGTAAAGTACTGAATATGAACAACATCGCGGCAGCCGGCATGGTGGCAACGCTTGCCAACAACATCCCGATGTTCGGCATGATGAAGCAGATGGATACCCGCGGCAAAGTCATCAACTGCGCCTTCGCCGTTTCCGCTGCTTTCGCCCTGGGCGACCACTTAGGCTTCGCCGCTGCCAACATGAACGCCATGATCTTCCCGATGATTGTCGGCAAGTTGATCGGCGGCGTAACGGCGATTGGCGTGGCGATGATGCTGGTGCCAAAAGAAGACGCGACCGCGACTAAAACCGAAGCGGAGGCACAATCGTGA", 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"gene_synonym", - "ECK2448" - ], - [ - "gene_synonym", - "ASAP:ABE-0008087" - ], - [ - "gene_synonym", - "EcoGene:EG14183" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76553" - ], - [ - "gene_synonym", - "NP_416948.4" - ], - [ - "gene_synonym", - "GeneID:946233" - ] - ], - "dna_sequence": "ATGCAAAATGAATTGCAGACCGCGCTCTTTCAGGCGTTCGATACCCTGAATCTGCAACGGGTAAAAACATTTAGCGTTCCACCGGTGACGCTTTGCGGTCCGGGCTCGGTGAGCAGTTGCGGACAGCAAGCGCAAACGCGTGGGCTGAAACATCTGTTCGTGATGGCAGACAGCTTTTTGCATCAGGCAGGGATGACCGCCGGGCTGACGCGTAGCCTGACCGTTAAAGGTATCGCCATGACGCTCTGGCCATGTCCGGTGGGCGAACCGTGCATTACCGACGTGTGTGCAGCCGTGGCGCAGTTGCGTGAGTCAGGCTGTGATGGGGTGATCGCGTTTGGCGGCGGCTCGGTGCTGGATGCGGCGAAAGCCGTGACGTTGCTGGTGACGAACCCGGATAGCACGCTGGCAGAGATGTCAGAAACCAGCGTTCTGCAACCGCGCTTGCCGCTGATTGCCATTCCAACTACCGCCGGAACCGGCTCTGAAACCACCAATGTAACGGTGATTATCGACGCGGTGAGCGGGCGCAAGCAGGTGTTAGCCCATGCCTCGCTGATGCCGGATGTGGCGATCCTCGACGCCGCATTGACCGAAGGTGTGCCGTCGCATGTCACGGCGATGACCGGCATTGATGCGTTAACCCATGCCATTGAAGCATACAGCGCCCTGAACGCTACACCGTTTACCGACAGTCTGGCGATTGGTGCCATTGCGATGATTGGCAAATCGCTGCCGAAAGCGGTGGGCTACGGTCACGACCTTGCCGCGCGCGAGAGCATGTTGCTGGCTTCATGTATGGCGGGAATGGCGTTTTCCAGTGCGGGTCTTGGGTTGTGCCACGCGATGGCGCATCAGCCGGGCGCGGCGCTGCATATTCCGCACGGTCTCGCGAACGCCATGTTGCTGCCAACGGTGATGGAATTTAACCGGATGGTTTGTCGTGAACGCTTTAGTCAGATTGGTCGGGCACTGCGAACTAAAAAATCCGACGATCGTGACGCTATTAACGCGGTAAGTGAGCTGATTGCGGAAGTTGGGATTGGTAAACGACTGGGCGATGTTGGTGCGACATCTGCGCATTACGGCGCATGGGCGCAGGCCGCGCTGGAAGATATTTGTCTGCGCAGTAACCCGCGTACCGCCAGCCTGGAGCAGATTGTCGGCCTGTACGCAGCGGCGCAATAA", 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"UniProtKB/Swiss-Prot:P77277" - ], - [ - "gene_synonym", - "yffW" - ], - [ - "gene_synonym", - "EcoGene:EG14184" - ], - [ - "gene_synonym", - "ECK2449" - ], - [ - "gene_synonym", - "b2454" - ], - [ - "gene_synonym", - "GeneID:947588" - ], - [ - "gene_synonym", - "GI:16130379" - ], - [ - "gene_synonym", - "ASAP:ABE-0008089" - ] - ], - "dna_sequence": 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[ - "NC_000913", - 2570337, - "-", - 837 - ] - ], - "md5": "40c82caf18b5db6594d60ce1076305ae", - "parent_gene": "", - "protein_md5": "7835fcb0de1f99090abb5a94278e0fd6", - "protein_translation": "MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSMVVDRDGQPVAVCLDWADVVRDGIVWDFFGAVTIVRRHLDTLEQQFGRRFSHAATSFPPGTDPRISINVLESAGLEVSHVLDEPTAVADLLQLDNAGVVDIGGGTTGIAIVKKGKVTYSADEATGGHHISLTLAGNRRISLEEAEQYKRGHGEEIWPAVKPVYEKMADIVARHIEGQGITDLWLAGGSCMQPGVAELFRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLYAK", - "protein_translation_length": 278, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14185" - ], - [ - "gene_synonym", - "GeneID:946943" - ], - [ - "gene_synonym", - "JW2439" - ], - [ - "gene_synonym", - "GI:16130380" - ], - [ - "gene_synonym", - "eutE" - ], - [ - "gene_synonym", - "NP_416950.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008091" - ], - [ - "gene_synonym", - "b2455" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77445" - ], - [ - "gene_synonym", - "ECK2450" - ], - [ - "gene_synonym", - "yffX" - ] - ], - "dna_sequence": 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"UniProtKB/Swiss-Prot:P0AEJ8" - ], - [ - "gene_synonym", - "NP_416951.1" - ], - [ - "gene_synonym", - "EcoGene:EG14186" - ], - [ - "gene_synonym", - "b2456" - ], - [ - "gene_synonym", - "GI:16130381" - ], - [ - "gene_synonym", - "cchB" - ], - [ - "gene_synonym", - "ASAP:ABE-0008093" - ], - [ - "gene_synonym", - "ECK2451" - ], - [ - "gene_synonym", - "JW2440" - ], - [ - "gene_synonym", - "yffY" - ] - ], - "dna_sequence": "ATGAAACTGGCAGTCGTCACTGGACAAATTGTTTGTACCGTACGCCATCACGGACTGGCGCATGACAAATTGCTGATGGTGGAAATGATTGATCCACAAGGTAATCCTGACGGGCAATGCGCCGTCGCCATCGACAATATTGGCGCGGGAACCGGGGAGTGGGTGTTACTGGTGAGTGGCAGTTCCGCCCGCCAGGCGCATAAAAGCGAAACGTCACCGGTCGATCTGTGCGTGATTGGCATTGTCGATGAGGTGGTGTCTGGCGGTCAGGTAATTTTCCACAAATAA", - "dna_sequence_length": 288, - "functions": [ - "Ethanolamine catabolic microcompartment shell protein" - ], - "id": "CDS_2436", - "location": [ - [ - "NC_000913", - 2572050, - "-", - 288 - ] - ], - "md5": "f9f12dca0cf956d431252d5d5a7662e7", - "parent_gene": "", - "protein_md5": "0258db62944cfdf2ec2a4525305a48dc", - "protein_translation": "MKLAVVTGQIVCTVRHHGLAHDKLLMVEMIDPQGNPDGQCAVAIDNIGAGTGEWVLLVSGSSARQAHKSETSPVDLCVIGIVDEVVSGGQVIFHK", - "protein_translation_length": 95, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416952.2" - ], - [ - "gene_synonym", - "GI:90111439" - ], - [ - "gene_synonym", - "GeneID:946942" - ], - [ - "gene_synonym", - "cchA" - ], - [ - "gene_synonym", - "eutM" - ], - [ - "gene_synonym", - "EcoGene:EG14187" - ], - [ - "gene_synonym", - "ASAP:ABE-0008095" - ], - [ - "gene_synonym", - "b2457" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABF4" - ], - [ - "gene_synonym", - "JW2441" - ], - [ - "gene_synonym", - "yffZ" - ], - [ - "gene_synonym", - "ECK2452" - ] - ], - "dna_sequence": "ATGGAAGCATTAGGAATGATCGAAACCCGGGGCCTGGTTGCACTGATTGAGGCTTCTGACGCGATGGTGAAAGCTGCGCGCGTCAAGCTGGTTGGTGTTAAGCAGATTGGCGGCGGCCTGTGTACTGCCATGGTTCGTGGTGATGTTGCAGCCTGTAAAGCCGCGACCGATGCAGGTGCCGCAGCGGCACAGCGTATCGGCGAGCTGGTATCTGTACACGTTATCCCGCGTCCGCACGGCGACCTGGAAGAAGTCTTCCCGATCGGCCTGAAAGGCGATAGCAGCAACCTGTAA", - "dna_sequence_length": 294, - "functions": [ - "ethanolamine utilization protein, putative carboxysome structural protein" - ], - "id": "CDS_2437", - "location": [ - [ - "NC_000913", - 2572450, - "-", - 294 - ] - ], - "md5": "b1e0c7315b9ea1126d948b481d0be554", - "parent_gene": "", - "protein_md5": "4c230c6514cdc384596566f76e37b4e9", - "protein_translation": "MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHGDLEEVFPIGLKGDSSNL", - "protein_translation_length": 97, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ypfA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77218" - ], - [ - "gene_synonym", - "eutI" - ], - [ - "gene_synonym", - "GeneID:946940" - ], - [ - "gene_synonym", - "eutD" - ], - [ - "gene_synonym", - "NP_416953.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008097" - ], - [ - "gene_synonym", - "GI:16130383" - ], - [ - "gene_synonym", - "b2458" - ], - [ - "gene_synonym", - "EcoGene:EG14188" - ], - [ - "gene_synonym", - "ECK2453" - ], - [ - "gene_synonym", - "JW2442" - ] - ], - "dna_sequence": "ATGATTATTGAACGTTGTCGTGAACTGGCGTTGCGAGCGCCCGCCAGAGTGGTTTTTCCGGATGCGTTAGACCAACGTGTGCTGAAAGCCGCGCAATATTTACATCAACAAGGTCTGGCAACGCCCATTCTGGTCGCCAATCCGTTTGAACTTCGTCAGTTTGCGCTCAGTCACGGCGTGGCGATGGACGGGCTACAGGTGATTGATCCGCATGGCAACCTCGCAATGCGGGAAGAATTTGCTCATCGCTGGCTGGCCCGCGCGGGCGAAAAAACGCCGCCGGATGCGCTGGAAAAACTTACCGACCCTCTGATGTTCGCCGCAGCAATGGTCAGCGCCGGTAAAGCGGATGTCTGTATCGCGGGCAACCTCTCTTCCACGGCAAATGTGCTGCGTGCCGGATTACGCATTATCGGCTTGCAGCCAGGCTGTAAAACGCTCTCTTCCATTTTCCTGATGTTGCCACAGTACAGCGGCCCGGCGTTGGGCTTTGCCGATTGCAGCGTGGTGCCACAGCCGACGGCGGCGCAGCTGGCGGATATCGCGCTTGCCAGTGCCGAAACCTGGCGCGCCATCACCGGAGAAGAGCCGCGCGTGGCGATGCTGTCGTTTTCCAGCAATGGTAGCGCCCGTCACCCCTGTGTTGCTAACGTCCAGCAGGCGACAGAAATCGTCCGTGAGCGCGCACCAAAGCTGGTGGTGGATGGCGAGTTACAGTTTGACGCCGCCTTCGTGCCGGAAGTGGCGGCGCAAAAAGCGCCTGCCAGCCCGCTACAGGGCAAGGCCAATGTGATGGTTTTTCCGTCGCTGGAAGCCGGAAATATTGGTTACAAAATCGCACAACGACTCGGCGGATATCGTGCCGTCGGGCCACTGATACAAGGACTTGCCGCGCCGATGCACGATCTCTCTCGTGGTTGTAGCGTGCAGGAAATTATCGAGCTGGCGCTGGTGGCAGCTGTGCCGCGTCAGACAGAAGTGAACCGCGAAAGCAGTTTACAAACACTGGTTGAATGA", 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"gene_synonym", - "ECK2454" - ], - [ - "gene_synonym", - "b2459" - ], - [ - "gene_synonym", - "NP_416954.1" - ], - [ - "gene_synonym", - "JW2443" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P65643" - ] - ], - "dna_sequence": "ATGAAAGATTTCATCACCGAAGCATGGCTAAGAGCGAACCATACGCTCAGCGAAGGCGCAGAGATCCATCTCCCTGCGGACAGTCGCCTGACGCCCTCTGCCCGGGAGTTGCTGGAAAGCCGCCATCTGCGCATCAAGTTTATTGACGAGCAGGGCCGCCTGTTTGTTGACGATGAACAGCAGCAGCCGCAGCCCGTTCATGGGCTGACCAGTAGCGATGAACATCCGCAGGCGTGCTGCGAACTGTGTCGCCAGCCGGTGGCAAAAAAGCCGGATACGCTGACTCACCTGTCGGCGGAAAAAATGGTCGCCAAAAGCGATCCGCGTCTGGGTTTTCGCGCGGTTCTCGACAGCACCATTGCGCTGGCAGTGTGGCTGCAAATTGAACTGGCGGAACCGTGGCAGCCGTGGCTGGCGGATATCCGTTCGCGTCTTGGCAACATTATGCGCGCCGATGCGCTGGGGGAACCGCTGGGCTGCCAGGCGATTGTCGGGCTTTCTGACGAAGATCTGCATCGGCTTTCTCATCAGCCGCTGCGCTATCTCGACCACGATCATCTGGTGCCGGAAGCCAGCCACGGGCGCGATGCTGCGTTGCTCAATCTGCTACGCACCAAAGTGCGGGAAACCGAAACCGTAGCGGCGCAGGTCTTTATCACCCGCAGCTTTGAAGTATTACGCCCGGACATTTTGCAGGCGCTGAACCGCCTTTCGAGCACGGTCTACGTGATGATGATCCTGAGCGTAACGAAGCAGCCGCTAACGGTGAAGCAGATCCAACAACGACTGGGGGAAACGCAATGA", - "dna_sequence_length": 804, - "functions": [ - "cobalamin adenosyltransferase involved in ethanolamine utilization" - ], - "id": "CDS_2439", - "location": [ - [ - "NC_000913", - 2574305, - "-", - 804 - ] - ], - "md5": "68a448b1cf7795b12d25ccf2bad987d4", - "parent_gene": "", - "protein_md5": "673bc2f15054f93501586c9caea997bf", - "protein_translation": "MKDFITEAWLRANHTLSEGAEIHLPADSRLTPSARELLESRHLRIKFIDEQGRLFVDDEQQQPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKMVAKSDPRLGFRAVLDSTIALAVWLQIELAEPWQPWLADIRSRLGNIMRADALGEPLGCQAIVGLSDEDLHRLSHQPLRYLDHDHLVPEASHGRDAALLNLLRTKVRETETVAAQVFITRSFEVLRPDILQALNRLSSTVYVMMILSVTKQPLTVKQIQQRLGETQ", - "protein_translation_length": 267, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ypfC" - ], - [ - "gene_synonym", - "ASAP:ABE-0008102" - ], - [ - "gene_synonym", - "EcoGene:EG14190" - ], - [ - "gene_synonym", - "GI:16130385" - ], - [ - "gene_synonym", - "GeneID:946935" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76555" - ], - [ - "gene_synonym", - "NP_416955.1" - ], - [ - "gene_synonym", - "ECK2455" - ], - [ - "gene_synonym", - "JW2444" - ], - [ - "gene_synonym", - "eutQ" - ], - [ - "gene_synonym", - "b2460" - ] - ], - 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"321d8c002e693621d0b00edcd7e34940", - "protein_translation": "MKKLITANDIREAHARGEQAMSVVLRASIITPEAREVADLLGFTITECDESIPVTASVPASVPADKTESQRIRETIIAQLPEGQFTESLVAQLMEKVMKEKQSLEQGAMQPSFKSVTGKGGIKVIDGSSVKFGRFDGAEPHCVGLTDLVTGDDGSSMAAGFMQWENAFFPWTLNYDEIDMVLEGELHVRHEGQTMIAKAGDVMFIPKGSSIEFGTTSSVKFLYVAWPANWQSL", - "protein_translation_length": 233, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008105" - ], - [ - "gene_synonym", - "ypfD" - ], - [ - "gene_synonym", - "NP_416956.1" - ], - [ - "gene_synonym", - "GI:16130386" - ], - [ - "gene_synonym", - "EcoGene:EG14191" - ], - [ - "gene_synonym", - "GeneID:946933" - ], - [ - "gene_synonym", - "JW2445" - ], - [ - "gene_synonym", - "eutP" - ], - [ - "gene_synonym", - "ECK2456" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76556" - ], - [ - "gene_synonym", - "b2461" - ] - ], - "dna_sequence": "ATGAAACGAATTGCGTTTGTGGGTAGCGTCGGGGCAGGAAAAACAACGTTATTTAATGCGTTGCAGGGGAATTATACCCTCGCCAGAAAAACACAGGCCGTGGAATTTAATGATAAGGGCGATATTGATACGCCGGGTGAATATTTTAACCATCCCCGCTGGTATCACGCCTTAATTACCACGCTACAGGATGTAGACATGCTGATCTATGTCCATGGCGCAAATGACCCGGAAAGTCGGTTGCCTGCCGGGTTGCTGGATATTGGCGTCAGCAAACGGCAAATCGCCGTCATCAGTAAAACGGACATGCCAGATGCTGACGTCGCCGCAACGCGAAAGTTATTGCTTGAGACGGGTTTCGAAGAGCCGATGTTCGAGCTAAACAGCCACGACCCGCAAAGCGTGCAGCAACTGGTGGATTATCTGGCATCTCTCACCAAACAGGAGGAAGCAGGTGAAAAAACTCATCACAGCGAATGA", - "dna_sequence_length": 480, - "functions": [ - "putative P-loop NTPase ethanolamine utilization protein" - ], - "id": "CDS_2441", - "location": [ - [ - "NC_000913", - 2575457, - "-", - 480 - ] - ], - "md5": "701cc1082e7b91f08959cbba918bf18f", - "parent_gene": "", - "protein_md5": "0b933fc751499c9748c43b1ad98a1ac3", - "protein_translation": "MKRIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKGDIDTPGEYFNHPRWYHALITTLQDVDMLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTDMPDADVAATRKLLLETGFEEPMFELNSHDPQSVQQLVDYLASLTKQEEAGEKTHHSE", - "protein_translation_length": 159, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946936" - ], - [ - "gene_synonym", - "ypfE" - ], - [ - "gene_synonym", - "GI:90111440" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63746" - ], - [ - "gene_synonym", - "ASAP:ABE-0008108" - ], - [ - "gene_synonym", - "NP_416957.4" - ], - [ - "gene_synonym", - "EcoGene:EG14192" - ], - [ - "gene_synonym", - "eutS" - ], - [ - "gene_synonym", - "ECK2457" - ], - [ - "gene_synonym", - "JW2446" - ], - [ - "gene_synonym", - "b2462" - ] - ], - "dna_sequence": "ATGGATAAAGAACGCATCATTCAGGAATTTGTGCCCGGCAAACAGGTCACACTGGCGCATCTCATCGCGCATCCCGGTGAGGAACTGGCGAAGAAAATCGGCGTTCCGGATGCGGGCGCAATTGGCATTATGACGCTAACTCCCGGCGAAACGGCGATGATCGCCGGTGATTTAGCGCTGAAAGCCGCTGATGTGCATATCGGTTTTCTCGACCGATTCAGCGGTGCATTGGTGATTTATGGCTCGGTGGGCGCAGTAGAAGAAGCGTTATCACAAACCGTCAGCGGTTTAGGTCGCTTATTAAATTATACGCTTTGTGAAATGACCAAAAGTTAA", - "dna_sequence_length": 336, - "functions": [ - "putative ethanol utilization carboxysome structural protein" - ], - "id": "CDS_2442", - "location": [ - [ - "NC_000913", - 2575805, - "-", - 336 - ] - ], - "md5": "cade4d384b5212f31340dbb125bc678c", - "parent_gene": "", - "protein_md5": "c19304397ac23e2aa387684ae488c741", - "protein_translation": "MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIMTLTPGETAMIAGDLALKAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLNYTLCEMTKS", - "protein_translation_length": 111, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946947" - ], - [ - "gene_synonym", - "maeB" - ], - [ - "gene_synonym", - "ypfF" - ], - [ - "gene_synonym", - "EcoGene:EG14193" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76558" - ], - [ - "gene_synonym", - "ASAP:ABE-0008111" - ], - [ - "gene_synonym", - "ECK2458" - ], - [ - "gene_synonym", - "NP_416958.1" - ], - [ - "gene_synonym", - "JW2447" - ], - [ - "gene_synonym", - "b2463" - ], - [ - "gene_synonym", - "GI:16130388" - ] - ], - "dna_sequence": "ATGGATGACCAGTTAAAACAAAGTGCACTTGATTTCCATGAATTTCCAGTTCCAGGGAAAATCCAGGTTTCTCCAACCAAGCCTCTGGCAACACAGCGCGATCTGGCGCTGGCCTACTCACCAGGCGTTGCCGCACCTTGTCTTGAAATCGAAAAAGACCCGTTAAAAGCCTACAAATATACCGCCCGAGGTAACCTGGTGGCGGTGATCTCTAACGGTACGGCGGTGCTGGGGTTAGGCAACATTGGCGCGCTGGCAGGCAAACCGGTGATGGAAGGCAAGGGCGTTCTGTTTAAGAAATTCGCCGGGATTGATGTATTTGACATTGAAGTTGACGAACTCGACCCGGACAAATTTATTGAAGTTGTCGCCGCGCTCGAACCAACCTTCGGCGGCATCAACCTCGAAGACATTAAAGCGCCAGAATGTTTCTATATTGAACAGAAACTGCGCGAGCGGATGAATATTCCGGTATTCCACGACGATCAGCACGGCACGGCAATTATCAGCACTGCCGCCATCCTCAACGGCTTGCGCGTGGTGGAGAAAAACATCTCCGACGTGCGGATGGTGGTTTCCGGCGCGGGTGCCGCAGCAATCGCCTGTATGAACCTGCTGGTAGCGCTGGGTCTGCAAAAACATAACATCGTGGTTTGCGATTCAAAAGGCGTTATCTATCAGGGCCGTGAGCCAAACATGGCGGAAACCAAAGCCGCATATGCGGTGGTGGATGACGGCAAACGTACCCTCGATGATGTGATTGAAGGCGCGGATATTTTCCTGGGCTGTTCCGGCCCGAAAGTGCTGACCCAGGAAATGGTGAAGAAAATGGCTCGTGCGCCAATGATCCTGGCGCTGGCGAACCCGGAACCGGAAATTCTGCCGCCGCTGGCGAAAGAAGTGCGTCCGGATGCCATCATTTGCACCGGTCGTTCTGACTATCCGAACCAGGTGAACAACGTCCTGTGCTTCCCGTTCATCTTCCGTGGCGCGCTGGACGTTGGCGCAACCGCCATCAACGAAGAGATGAAACTGGCGGCGGTACGTGCGATTGCAGAACTCGCCCATGCGGAACAGAGCGAAGTGGTGGCTTCAGCGTATGGCGATCAGGATCTGAGCTTTGGTCCGGAATACATCATTCCAAAACCGTTTGATCCGCGCTTGATCGTTAAGATCGCTCCTGCGGTCGCTAAAGCCGCGATGGAGTCGGGCGTGGCGACTCGTCCGATTGCTGATTTCGACGTCTACATCGACAAGCTGACTGAGTTCGTTTACAAAACCAACCTGTTTATGAAGCCGATTTTCTCCCAGGCTCGCAAAGCGCCGAAGCGCGTTGTTCTGCCGGAAGGGGAAGAGGCGCGCGTTCTGCATGCCACTCAGGAACTGGTAACGCTGGGACTGGCGAAACCGATCCTTATCGGTCGTCCGAACGTGATCGAAATGCGCATTCAGAAACTGGGCTTGCAGATCAAAGCGGGCGTTGATTTTGAGATCGTCAATAACGAATCCGATCCGCGCTTTAAAGAGTACTGGACCGAATACTTCCAGATCATGAAGCGTCGCGGCGTCACTCAGGAACAGGCGCAGCGGGCGCTGATCAGTAACCCGACAGTGATCGGCGCGATCATGGTTCAGCGTGGGGAAGCCGATGCAATGATTTGCGGTACGGTGGGTGATTATCATGAACATTTTAGCGTGGTGAAAAATGTCTTTGGTTATCGCGATGGCGTTCACACCGCAGGTGCCATGAACGCGCTGCTGCTGCCGAGTGGTAACACCTTTATTGCCGATACATATGTTAATGATGAACCGGATGCAGAAGAGCTGGCGGAGATCACCTTGATGGCGGCAGAAACTGTCCGTCGTTTTGGTATTGAGCCGCGCGTTGCTTTGTTGTCGCACTCCAACTTTGGTTCTTCTGACTGCCCGTCGTCGAGCAAAATGCGTCAGGCGCTGGAACTGGTCAGGGAACGTGCACCAGAACTGATGATTGATGGTGAAATGCACGGCGATGCAGCGCTGGTGGAAGCGATTCGCAACGACCGTATGCCGGACAGCTCTTTGAAAGGTTCCGCCAATATTCTGGTGATGCCGAACATGGAAGCTGCCCGCATTAGTTACAACTTACTGCGTGTTTCCAGCTCGGAAGGTGTGACTGTCGGCCCGGTGCTGATGGGTGTGGCGAAACCGGTTCACGTGTTAACGCCGATCGCATCGGTGCGTCGTATCGTCAACATGGTGGCGCTGGCCGTGGTAGAAGCGCAAACCCAACCGCTGTAA", - "dna_sequence_length": 2280, - "functions": [ - "malic enzyme: putative oxidoreductase/phosphotransacetylase" - ], - "id": "CDS_2443", - "location": [ - [ - "NC_000913", - 2578377, - "-", - 2280 - ] - ], - "md5": "ad85bbc64befb686f0a499d103f594a9", - "parent_gene": "", - "protein_md5": "90996f0f25a2e513f36da389a5d2166d", - "protein_translation": "MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVAAPCLEIEKDPLKAYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFAGIDVFDIEVDELDPDKFIEVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFHDDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVVCDSKGVIYQGREPNMAETKAAYAVVDDGKRTLDDVIEGADIFLGCSGPKVLTQEMVKKMARAPMILALANPEPEILPPLAKEVRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDVGATAINEEMKLAAVRAIAELAHAEQSEVVASAYGDQDLSFGPEYIIPKPFDPRLIVKIAPAVAKAAMESGVATRPIADFDVYIDKLTEFVYKTNLFMKPIFSQARKAPKRVVLPEGEEARVLHATQELVTLGLAKPILIGRPNVIEMRIQKLGLQIKAGVDFEIVNNESDPRFKEYWTEYFQIMKRRGVTQEQAQRALISNPTVIGAIMVQRGEADAMICGTVGDYHEHFSVVKNVFGYRDGVHTAGAMNALLLPSGNTFIADTYVNDEPDAEELAEITLMAAETVRRFGIEPRVALLSHSNFGSSDCPSSSKMRQALELVRERAPELMIDGEMHGDAALVEAIRNDRMPDSSLKGSANILVMPNMEAARISYNLLRVSSSEGVTVGPVLMGVAKPVHVLTPIASVRRIVNMVALAVVEAQTQPL", - "protein_translation_length": 759, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11797" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A867" - ], - [ - "gene_synonym", - "NP_416959.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008115" - ], - [ - "gene_synonym", - "GeneID:947006" - ], - [ - "gene_synonym", - "ECK2459" - ], - [ - "gene_synonym", - "JW2448" - ], - [ - "gene_synonym", - "talA" - ], - [ - "gene_synonym", - "b2464" - ], - [ - "gene_synonym", - "GI:16130389" - ] - ], - "dna_sequence": "ATGAACGAGTTAGACGGCATCAAACAGTTCACCACTGTCGTGGCAGACAGCGGCGATATTGAGTCCATTCGCCATTATCATCCCCAGGATGCCACCACCAATCCTTCGCTGTTACTCAAAGCTGCCGGATTATCACAATATGAGCATTTAATAGACGATGCTATCGCCTGGGGTAAAAAAAATGGCAAGACCCAGGAACAACAGGTGGTCGCAGCGTGTGACAAACTGGCGGTCAATTTCGGTGCTGAAATCCTCAAAATCGTACCCGGTCGCGTGTCAACAGAAGTTGATGCACGCCTCTCTTTTGATAAAGAAAAGAGTATTGAGAAGGCGCGCCATCTGGTGGACTTGTATCAGCAACAAGGCGTTGAGAAATCACGCATTCTGATCAAGCTGGCTTCGACCTGGGAAGGAATTCGCGCGGCAGAAGAGCTGGAAAAAGAAGGTATTAACTGCAACCTGACGCTGCTGTTTTCTTTTGCACAGGCACGGGCCTGTGCGGAAGCAGGCGTTTTTCTGATTTCGCCGTTTGTCGGGCGTATTTATGACTGGTATCAGGCACGCAAGCCGATGGACCCGTATGTGGTGGAAGAAGATCCGGGCGTTAAATCGGTGCGCAATATCTACGACTACTATAAGCAACACCACTATGAAACCATTGTGATGGGCGCGAGCTTCCGTCGCACCGAACAAATCCTCGCCTTAACCGGCTGCGATCGACTGACTATCGCACCGAATTTACTGAAGGAGCTGCAGGAAAAAGTTTCGCCAGTGGTACGTAAATTAATCCCACCTTCTCAGACGTTCCCACGCCCAGCTCCCATGAGCGAAGCGGAGTTCCGTTGGGAGCACAATCAGGATGCGATGGCGGTAGAAAAACTGTCTGAAGGCATTCGTCTGTTCGCCGTTGATCAACGCAAACTGGAAGATCTTCTTGCCGCCAAACTATAA", - "dna_sequence_length": 951, - "functions": [ - "transaldolase A" - ], - "id": "CDS_2444", - "location": [ - [ - "NC_000913", - 2578666, - "+", - 951 - ] - ], - "md5": "a4fa2dca76c40d5dcafe3c268cf2aac9", - "parent_gene": "", - "protein_md5": "fe506aea138ef6a4ad7fb74ea420b651", - "protein_translation": "MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGLSQYEHLIDDAIAWGKKNGKTQEQQVVAACDKLAVNFGAEILKIVPGRVSTEVDARLSFDKEKSIEKARHLVDLYQQQGVEKSRILIKLASTWEGIRAAEELEKEGINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHHYETIVMGASFRRTEQILALTGCDRLTIAPNLLKELQEKVSPVVRKLIPPSQTFPRPAPMSEAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL", - "protein_translation_length": 316, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416960.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33570" - ], - [ - "gene_synonym", - "GeneID:945865" - ], - [ - "gene_synonym", - "EcoGene:EG12100" - ], - [ - "gene_synonym", - "ECK2460" - ], - [ - "gene_synonym", - "GI:16130390" - ], - [ - "gene_synonym", - "tktB" - ], - [ - "gene_synonym", - "JW2449" - ], - [ - "gene_synonym", - "b2465" - ], - [ - "gene_synonym", - "ASAP:ABE-0008117" - ] - ], - "dna_sequence": "ATGTCCCGAAAAGACCTTGCCAATGCGATTCGCGCACTCAGTATGGATGCGGTACAAAAAGCCAACTCTGGTCATCCCGGCGCGCCGATGGGCATGGCTGATATTGCCGAAGTGCTGTGGAACGATTTTCTTAAACATAACCCTACCGACCCAACCTGGTATGATCGCGACCGCTTTATTCTTTCCAACGGTCACGCGTCGATGCTGCTCTACAGTTTGCTACATCTGACCGGTTACGACCTGCCGCTGGAAGAACTGAAGAACTTCCGTCAGTTGCATTCGAAAACCCCAGGCCACCCGGAGATTGGCTATACGCCAGGCGTTGAAACCACCACCGGCCCGCTTGGACAAGGTTTGGCGAACGCCGTCGGGCTGGCGATAGCAGAGCGTACACTGGCGGCGCAGTTTAACCAGCCAGACCATGAGATCGTCGATCACTTCACCTATGTGTTTATGGGCGACGGCTGCCTGATGGAAGGTATTTCCCACGAAGTCTGTTCGCTGGCAGGCACGCTGGGACTGGGCAAGCTGATTGGTTTTTACGATCACAACGGTATTTCCATCGACGGTGAAACAGAAGGCTGGTTTACCGACGATACGGCAAAACGTTTTGAAGCCTATCACTGGCATGTGATCCATGAAATCGACGGTCACGATCCGCAGGCGGTGAAGGAAGCGATCCTTGAAGCGCAAAGCGTGAAAGATAAGCCGTCGCTGATTATCTGCCGTACGGTGATTGGCTTTGGTTCGCCGAATAAAGCAGGTAAGGAAGAGGCGCACGGCGCACCACTGGGGGAAGAAGAAGTGGCGCTGGCACGGCAAAAACTGGGCTGGCACCATCCGCCATTTGAGATCCCTAAAGAGATTTATCACGCCTGGGATGCCCGTGAAAAAGGCGAAAAAGCGCAGCAGAGCTGGAATGAGAAGTTTGCCGCCTATAAAAAGGCTCATCCGCAACTGGCAGAAGAGTTTACCCGACGGATGAGCGGTGGTTTACCGAAGGACTGGGAGAAAACGACTCAGAAATATATCAATGAGTTACAGGCAAATCCGGCGAAAATCGCTACCCGTAAGGCTTCGCAAAATACGCTTAACGCTTACGGGCCGATGCTGCCTGAGTTGCTCGGCGGTTCGGCGGATCTGGCTCCCAGCAACCTGACCATCTGGAAAGGTTCTGTTTCGCTGAAGGAAGATCCAGCGGGCAACTACATTCACTACGGGGTGCGTGAATTTGGCATGACCGCTATCGCCAACGGCATCGCGCACCACGGCGGCTTTGTGCCGTATACCGCGACGTTCCTGATGTTTGTTGAATACGCCCGTAACGCCGCGCGGATGGCGGCACTGATGAAAGCGCGGCAGATTATGGTTTATACCCACGACTCAATTGGCCTGGGCGAAGATGGTCCGACGCACCAGGCTGTTGAGCAACTGGCCAGCCTGCGCTTAACGCCAAATTTCAGCACCTGGCGACCGTGCGATCAGGTGGAAGCGGCGGTGGGCTGGAAGCTGGCGGTTGAGCGCCACAACGGACCGACGGCACTGATCCTCTCAAGGCAGAATCTGGCCCAGGTGGAACGTACGCCGGATCAGGTTAAAGAGATTGCTCGTGGCGGTTATGTGCTGAAAGACAGCGGCGGTAAGCCAGATATTATTCTGATTGCCACCGGTTCAGAGATGGAAATTACCCTGCAAGCGGCAGAGAAATTAGCAGGAGAAGGTCGCAATGTACGCGTAGTTTCCCTGCCCTCGACCGATATTTTCGACGCCCAGGATGAGGAATATCGGGAGTCGGTGTTGCCTTCTAACGTTGCGGCTCGCGTGGCGGTGGAAGCAGGTATTGCCGATTACTGGTACAAGTATGTTGGTCTGAAAGGGGCAATTGTCGGGATGACGGGTTACGGGGAATCTGCTCCGGCGGATAAGCTGTTCCCGTTCTTTGGCTTTACCGCCGAGAATATTGTGGCAAAAGCGCATAAGGTGCTGGGAGTGAAAGGTGCCTGA", 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"MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPTDPTWYDRDRFILSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEIGYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEGISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGHDPQAVKEAILEAQSVKDKPSLIICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKLGWHHPPFEIPKEIYHAWDAREKGEKAQQSWNEKFAAYKKAHPQLAEEFTRRMSGGLPKDWEKTTQKYINELQANPAKIATRKASQNTLNAYGPMLPELLGGSADLAPSNLTIWKGSVSLKEDPAGNYIHYGVREFGMTAIANGIAHHGGFVPYTATFLMFVEYARNAARMAALMKARQIMVYTHDSIGLGEDGPTHQAVEQLASLRLTPNFSTWRPCDQVEAAVGWKLAVERHNGPTALILSRQNLAQVERTPDQVKEIARGGYVLKDSGGKPDIILIATGSEMEITLQAAEKLAGEGRNVRVVSLPSTDIFDAQDEEYRESVLPSNVAARVAVEAGIADYWYKYVGLKGAIVGMTGYGESAPADKLFPFFGFTAENIVAKAHKVLGVKGA", - "protein_translation_length": 667, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ypfG" - ], - [ - "gene_synonym", - "GeneID:946828" - ], - [ - "gene_synonym", - "ECK2461" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76559" - ], - [ - "gene_synonym", - "GI:16130391" - ], - [ - "gene_synonym", - "EcoGene:EG14194" - ], - [ - "gene_synonym", - "NP_416961.1" - ], - [ - "gene_synonym", - "b2466" - ], - [ - "gene_synonym", - "JW2450" - ], - [ - "gene_synonym", - "ASAP:ABE-0008120" - ] - ], - "dna_sequence": "ATGCGCTATCGCATTTTCCTTCTCTTTTTTTTCGCTTTGTTGCCGACGTCTTTGGTGTGGGCGGCACCAGCGCAACGGGCGTTTTCCGACTGGCAGGTCACCTGTAATAACCAAAATTTCTGCGTGGCGCGTAATACGGGCGATCATAATGGACTGGTGATGACCCTGAGCCGCAGCGCCGGGGCGCATACCGATGCCGTTTTACGTATTGAGCGCGGCGGATTGAAGTCGCCGGAGGCGTCAGAAGGGGAGATAGCGCCACGGCTGCTGTTAGATGGCGAGCCGTTGGCGTTAAGTGGTGACAAGTGGCGGATTTCACCATGGTTATTAGTAACCGATGATACGGCAACCATCACCGCGTTTTTGCAGATGATTCAGGAAGGGAAGGCAATCACCTTACGCGATGGCGATCAGACCATTTCTCTGAGTGGCTTAAAAGCAGCGTTGTTGTTTATTGATGCTCAGCAAAAGCGCGTTGGCAGTGAAACCGCGTGGATCAAGAAAGGGGACGAACCGCCGCTCAGCGTACCGCCCGCGCCTGCGCTGAAAGAGGTCGCGGTGGTTAACCCAACGCCGACGCCACTCTCACTCGAAGAACGCAACGATTTGCTGGATTATGGAAACTGGCGGATGAATGGTCTGCGCTGCTCGCTTGATCCATTGCGTCGTGAGGTGAATGTCACTGCGCTGACTGATGATAAAGCGCTGATGATGATTAGCTGTGAGGCAGGGGCCTATAACACCATTGATTTGGCATGGATTGTGTCGCGTAAAAAGCCACTAGCTTCGCGCCCGGTTCGGTTGCGTTTGCCGTTCAACAACGGTCAGGAGACGAATGAACTGGAACTGATGAACGCAACATTTGATGAGAAATCGCGTGAACTGGTGACCTTAGCGAAAGGGCGCGGATTAAGCGATTGTGGCATTCAGGCGCGCTGGCGCTTTGACGGTCAGCGTTTTCGCCTGGTGCGTTACGCCGCAGAACCCACCTGCGATAACTGGCATGGGCCAGACGCCTGGCCCACGTTGTGGATCACCCGTTAA", - "dna_sequence_length": 1044, - "functions": [ - "DUF1176 family protein" - ], - "id": "CDS_2446", - "location": [ - [ - "NC_000913", - 2582777, - "-", - 1044 - ] - ], - "md5": "d4fc1ba339cf29ad05e2604813ac3bda", - "parent_gene": "", - "protein_md5": "e225df92eaca90364c47c581e790371b", - "protein_translation": "MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVARNTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPEASEGEIAPRLLLDGEPLALSGDKWRISPWLLVTDDTATITAFLQMIQEGKAITLRDGDQTISLSGLKAALLFIDAQQKRVGSETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSLDPLRREVNVTALTDDKALMMISCEAGAYNTIDLAWIVSRKKPLASRPVRLRLPFNNGQETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNWHGPDAWPTLWITR", - "protein_translation_length": 347, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "nudK" - ], - [ - "gene_synonym", - "EcoGene:EG12410" - ], - [ - "gene_synonym", - "GeneID:947072" - ], - [ - "gene_synonym", - "yffH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37128" - ], - [ - "gene_synonym", - "ECK2462" - ], - [ - "gene_synonym", - "GI:16130392" - ], - [ - "gene_synonym", - "NP_416962.1" - ], - [ - "gene_synonym", - "b2467" - ], - [ - "gene_synonym", - "ASAP:ABE-0008123" - ], - [ - "gene_synonym", - "JW2451" - ] - ], - "dna_sequence": "ATGACGCAACAAATCACCCTCATTAAAGACAAAATTCTCTCCGATAACTATTTCACCCTGCACAACATTACTTACGATCTCACGCGCAAAGACGGCGAAGTTATCCGCCATAAACGTGAAGTGTACGATCGCGGCAATGGTGCGACGATCCTCCTGTACAACACGAAGAAAAAGACCGTGGTTCTGATTCGTCAGTTCCGTGTCGCTACCTGGGTTAATGGCAATGAAAGCGGGCAGCTGATTGAAAGCTGCGCCGGGCTGCTGGATAACGACGAACCGGAAGTGTGTATTCGCAAAGAAGCGATTGAAGAGACGGGCTATGAAGTGGGTGAAGTGCGCAAATTATTTGAACTGTATATGTCGCCAGGCGGTGTGACTGAGCTAATCCACTTTTTTATCGCCGAATACAGTGACAATCAGCGCGCTAACGCCGGTGGCGGTGTCGAAGATGAAGATATTGAAGTGCTCGAGCTGCCGTTCAGCCAGGCGCTGGAGATGATCAAAACCGGCGAGATACGTGACGGTAAGACGGTGTTATTGCTTAACTATTTGCAAACGTCACATTTAATGGACTGA", - "dna_sequence_length": 576, - "functions": [ - "GDP-mannose pyrophosphatase" - ], - "id": "CDS_2447", - "location": [ - [ - "NC_000913", - 2583478, - "-", - 576 - ] - ], - "md5": "499bc5ada765e193ba74620ad463eea3", - "parent_gene": "", - "protein_md5": "58d8812bf4ba5e8a835e39f72b0e4ec2", - "protein_translation": "MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDEPEVCIRKEAIEETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPFSQALEMIKTGEIRDGKTVLLLNYLQTSHLMD", - "protein_translation_length": 191, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yffG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37127" - ], - [ - "gene_synonym", - "NP_416963.1" - ], - [ - "gene_synonym", - "GI:16130393" - ], - [ - "gene_synonym", - "EcoGene:EG12409" - ], - [ - "gene_synonym", - "ECK2463" - ], - [ - "gene_synonym", - "b2468" - ], - [ - "gene_synonym", - "ASAP:ABE-0008127" - ], - [ - "gene_synonym", - "GeneID:947383" - ], - [ - "gene_synonym", - "aegA" - ], - [ - "gene_synonym", - "JW2452" - ] - ], - "dna_sequence": "ATGAATCGTTTTATTATGGCCAACAGTCAGCAATGTCTGGGTTGTCATGCTTGTGAAATCGCCTGTGTCATGGCTCACAATGATGAGCAACATGTCCTGAGCCAACACCATTTTCATCCCCGAATTACGGTTATCAAACATCAACAGCAACGTAGTGCAGTGACCTGTCACCATTGTGAAGATGCGCCCTGCGCCCGTAGCTGCCCTAATGGCGCAATCAGCCACGTTGATGACAGCATTCAGGTCAATCAGCAAAAGTGTATTGGCTGTAAATCCTGCGTGGTGGCCTGTCCTTTTGGTACGATGCAAATCGTCCTGACACCCGTCGCGGCAGGAAAAGTAAAAGCCACGGCGCATAAATGCGACCTTTGTGCGGGGCGCGAAAACGGTCCTGCCTGTGTTGAGAATTGCCCGGCGGACGCGCTGCAACTGGTCACTGACGTCGCACTCTCCGGCATGGCGAAATCCCGCCGCTTGCGCACCGCGCGTCAGGAACATCAACCGTGGCATGCCAGTACCGCGGCGCAAGAAATGCCGGTAATGAGTAAAGTCGAACAAATGCAGGCAACGCCCGCGCGTGGCGAGCCGGATAAACTGGCGATTGAAGCGCGCAAAACCGGTTTTGATGAAATTTATCTGCCATTTCGCGCCGACCAGGCACAACGGGAAGCCTCGCGCTGCCTTAAGTGCGGCGAGCACAGCGTTTGTGAATGGACCTGCCCGCTGCATAACCATATACCGCAGTGGATTGAACTGGTGAAAGCCGGAAACATCGACGCCGCCGTCGAGCTTTCTCACCAGACCAACACCCTGCCGGAAATTACCGGACGCGTTTGTCCGCAAGACCGTTTGTGTGAAGGTGCCTGTACTATTCGCGATGAGCACGGCGCGGTAACTATCGGCAACATTGAACGCTACATTTCAGATCAGGCGTTGGCGAAAGGTTGGCGTCCTGACTTAAGCCATGTCACCAAAGTGGACAAGCGGGTGGCGATTATCGGTGCAGGTCCGGCAGGGCTGGCCTGTGCGGATGTTCTGACCCGCAATGGCGTGGGGGTGACGGTGTACGATCGCCATCCAGAAATCGGTGGCTTGCTCACTTTCGGCATTCCTTCTTTCAAACTGGATAAATCCCTGCTGGCACGCCGTCGGGAAATCTTCAGCGCGATGGGGATTCACTTCGAACTCAATTGTGAAGTGGGTAAAGATGTCTCTTTGGATTCGCTTTTGGAACAATACGACGCGGTCTTCGTTGGCGTAGGCACTTACCGTTCCATGAAAGCGGGTTTACCCAATGAAGATGCGCCGGGCGTTTATGACGCGCTGCCGTTCCTCATTGCCAACACTAAACAGGTGATGGGGCTCGAAGAGCTACCGGAAGAGCCGTTTATCAATACCGCCGGACTTAACGTCGTGGTACTGGGCGGCGGCGACACCGCGATGGACTGTGTGCGTACCGCACTGCGCCACGGCGCGAGTAACGTCACCTGCGCTTATCGTCGTGATGAAGCTAACATGCCAGGCTCGAAGAAAGAAGTGAAGAACGCCCGCGAAGAGGGGGCCAACTTCGAATTTAACGTCCAGCCGGTGGCGCTTGAGCTGAATGAACAAGGTCACGTCTGCGGGATTCGTTTCCTGCGCACGCGTCTTGGAGAGCCGGATGCCCAGGGGCGTCGGCGTCCAGTGCCGGTGGAAGGCAGTGAATTTGTCATGCCAGCCGACGCGGTGATTATGGCGTTTGGCTTCAATCCGCACGGGATGCCGTGGCTGGAGTCGCACGGTGTAACGGTAGACAAATGGGGCCGCATCATCGCGGATGTGGAAAGCCAGTACCGTTACCAGACCACCAATCCGAAAATCTTCGCTGGTGGTGACGCCGTGCGTGGTGCGGATCTGGTGGTTACCGCAATGGCAGAAGGACGTCATGCGGCACAGGGGATTATTGACTGGCTGGGGGTAAAATCAGTCAAATCTCACTGA", - "dna_sequence_length": 1980, - "functions": [ - "putative oxidoreductase, FeS binding subunit/NAD/FAD-binding subunit" - ], - "id": "CDS_2448", - "location": [ - [ - "NC_000913", - 2585525, - "-", - 1980 - ] - ], - "md5": "534cfac9052d4cff49d04234f2e97b4a", - "parent_gene": "", - "protein_md5": "cb522af96a5755bd7714deec2b0a97c6", - "protein_translation": "MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITVIKHQQQRSAVTCHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFGTMQIVLTPVAAGKVKATAHKCDLCAGRENGPACVENCPADALQLVTDVALSGMAKSRRLRTARQEHQPWHASTAAQEMPVMSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRADQAQREASRCLKCGEHSVCEWTCPLHNHIPQWIELVKAGNIDAAVELSHQTNTLPEITGRVCPQDRLCEGACTIRDEHGAVTIGNIERYISDQALAKGWRPDLSHVTKVDKRVAIIGAGPAGLACADVLTRNGVGVTVYDRHPEIGGLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEVGKDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTAMDCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRRPVPVEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWGRIIADVESQYRYQTTNPKIFAGGDAVRGADLVVTAMAEGRHAAQGIIDWLGVKSVKSH", - "protein_translation_length": 659, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416964.1" - ], - [ - "gene_synonym", - "EcoGene:EG11460" - ], - [ - "gene_synonym", - "narQ" - ], - [ - "gene_synonym", - "GeneID:946948" - ], - [ - "gene_synonym", - "GI:16130394" - ], - [ - "gene_synonym", - "ECK2464" - ], - [ - "gene_synonym", - "b2469" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27896" - ], - [ - "gene_synonym", - "JW2453" - ], - [ - "gene_synonym", - "ASAP:ABE-0008132" - ] - ], - "dna_sequence": "GTGATTGTTAAACGACCCGTCTCGGCCAGTCTGGCCCGGGCCTTTTTTTACATTGTGCTGCTGTCGATTCTTTCCACGGGTATCGCTCTGCTAACTCTGGCGAGCAGTTTGCGCGACGCTGAGGCTATCAATATTGCCGGATCGCTGCGTATGCAGAGTTACCGCCTGGGCTACGACTTGCAAAGTGGCAGTCCACAACTCAATGCACATCGCCAGTTATTTCAGCAGGCACTGCATTCACCGGTATTAACCAACCTCAACGTCTGGTATGTGCCAGAAGCAGTAAAAACTCGCTATGCGCATCTGAATGCCAACTGGCTGGAGATGAATAATCGGCTCAGCAAGGGCGATTTGCCGTGGTATCAGGCCAATATTAATAATTATGTTAATCAGATAGACCTGTTCGTACTGGCTTTACAGCACTACGCTGAACGCAAAATGCTGCTGGTGGTGGCGATTTCCCTGGCTGGCGGCATCGGTATTTTCACGCTGGTCTTTTTTACTTTGCGCCGCATACGCCATCAGGTGGTTGCCCCGCTGAATCAGCTGGTTACCGCCAGTCAGCGTATTGAACACGGGCAGTTCGACTCGCCGCCGCTGGATACCAACCTGCCGAATGAGCTTGGTCTGCTTGCAAAAACCTTTAACCAGATGTCGAGCGAGCTGCATAAATTGTACCGTTCGCTGGAAGCGTCAGTAGAAGAAAAGACCCGCGATCTCCACGAGGCCAAGCGTCGTCTGGAGGTGTTGTATCAGTGTTCGCAGGCGCTGAACACTAGCCAGATTGATGTGCATTGTTTCCGCCATATTTTGCAGATTGTTCGCGACAATGAAGCGGCTGAATATCTGGAGTTAAATGTCGGTGAAAACTGGCGGATTAGCGAAGGGCAACCAAACCCGGAATTGCCGATGCAGATTTTACCGGTGACAATGCAAGAGACGGTTTACGGCGAACTGCACTGGCAAAATAGTCACGTTTCATCATCAGAACCGCTGCTTAACAGCGTTTCGTCGATGCTGGGACGCGGTTTGTACTTTAATCAGGCGCAGAAGCATTTTCAGCAATTATTGTTGATGGAAGAACGTGCGACCATCGCCCGCGAATTGCACGACTCGCTGGCTCAGGTACTTTCTTACTTACGTATCCAGTTGACGTTACTGAAGCGTTCGATACCGGAAGATAACGCCACCGCACAAAGTATCATGGCCGATTTTTCCCAGGCGTTGAATGATGCTTATCGGCAGTTACGCGAGCTGTTGACTACTTTCCGCCTGACGCTGCAGCAGGCGGATCTCCCCTCCGCATTGAGGGAAATGCTGGATACGTTACAAAATCAAACCAGCGCCAAACTGACCCTCGACTGCCGTCTGCCAACCCTGGCACTGGATGCGCAAATGCAGGTGCATTTGTTGCAAATTATTCGCGAAGCGGTGCTGAATGCGATGAAGCACGCCAACGCCAGCGAAATCGCCGTCAGTTGCGTCACCGCGCCGGACGGCAATCACACGGTTTATATCCGTGATAACGGGATTGGTATCGGTGAACCGAAAGAACCCGAAGGTCATTATGGTCTGAATATCATGCGCGAACGCGCGGAACGGCTAGGTGGGACGCTGACTTTTTCACAACCTTCCGGCGGCGGCACGTTAGTGAGTATTAGCTTTCGCTCTGCGGAGGGTGAGGAAAGTCAGTTAATGTAA", - "dna_sequence_length": 1701, - "functions": [ - "sensory histidine kinase in two-component regulatory system with NarP" - ], - "id": "CDS_2449", - "location": [ - [ - "NC_000913", - 2585731, - "+", - 1701 - ] - ], - "md5": "1a79ca32a2c021c84f59a351208ba5c0", - "parent_gene": "", - "protein_md5": "2b1bdcea00f67baf4db3a84d009d82eb", - "protein_translation": "MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAINIAGSLRMQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHLNANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIGIFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPLDTNLPNELGLLAKTFNQMSSELHKLYRSLEASVEEKTRDLHEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRDNEAAEYLELNVGENWRISEGQPNPELPMQILPVTMQETVYGELHWQNSHVSSSEPLLNSVSSMLGRGLYFNQAQKHFQQLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIPEDNATAQSIMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAKLTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRDNGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISFRSAEGEESQLM", - "protein_translation_length": 566, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416965.1" - ], - [ - "gene_synonym", - "yffA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24177" - ], - [ - "gene_synonym", - "GeneID:945464" - ], - [ - "gene_synonym", - "GI:16130395" - ], - [ - "gene_synonym", - "ECK2465" - ], - [ - "gene_synonym", - "acrD" - ], - [ - "gene_synonym", - "b2470" - ], - [ - "gene_synonym", - "JW2454" - ], - [ - "gene_synonym", - "ASAP:ABE-0008136" - ], - [ - "gene_synonym", - "EcoGene:EG10014" - ] - ], - "dna_sequence": "ATGGCGAATTTCTTTATTGATCGCCCCATTTTTGCCTGGGTGCTGGCAATCCTGTTGTGTCTGACAGGTACCCTGGCGATTTTTTCATTGCCCGTTGAACAATACCCCGATCTCGCGCCACCGAATGTGCGAGTGACCGCTAACTATCCCGGCGCATCGGCCCAGACGCTGGAAAACACCGTGACCCAGGTTATCGAGCAAAATATGACCGGCCTCGATAATCTCATGTATATGTCATCTCAGAGCAGTGGCACCGGTCAGGCATCTGTCACTTTAAGTTTTAAAGCAGGCACCGATCCGGACGAAGCCGTGCAGCAAGTACAAAACCAGCTGCAATCAGCCATGCGAAAGTTACCGCAGGCGGTGCAAAATCAGGGCGTGACGGTGCGTAAAACCGGCGATACCAACATTCTGACCATTGCCTTCGTCTCTACCGATGGTTCGATGGATAAACAGGATATTGCTGATTATGTTGCCAGTAATATTCAGGACCCGTTAAGCCGCGTGAATGGCGTCGGGGATATCGATGCCTATGGTTCGCAATATTCCATGCGTATCTGGCTGGACCCGGCGAAACTCAACAGTTTCCAGATGACGGCTAAAGATGTCACTGATGCCATTGAGTCACAGAACGCGCAGATTGCGGTTGGGCAACTTGGTGGTACACCTTCCGTCGATAAGCAGGCGCTCAACGCCACCATTAACGCCCAGTCACTGCTGCAAACACCAGAACAGTTCCGCGATATCACCTTGCGGGTCAATCAGGACGGCTCAGAGGTAAGGCTGGGCGATGTCGCCACCGTCGAAATGGGGGCGGAGAAATACGATTATCTTAGCCGCTTCAATGGTAAGCCAGCCTCCGGGCTGGGGGTAAAACTGGCCTCCGGCGCTAACGAAATGGCGACAGCGGAGCTGGTGCTCAATCGTCTCGACGAGCTGGCGCAGTATTTCCCGCATGGACTGGAATACAAGGTGGCGTATGAAACCACCTCGTTTGTTAAAGCCTCCATTGAAGACGTGGTGAAAACGCTGCTGGAAGCTATCGCTCTGGTTTTCCTCGTTATGTATCTGTTCCTGCAAAACTTCCGCGCCACGCTGATACCCACTATCGCCGTGCCGGTGGTGTTGATGGGAACCTTCTCCGTACTTTACGCCTTCGGTTACAGCGTCAACACCTTAACCATGTTCGCGATGGTGCTGGCGATCGGTCTGCTGGTGGATGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGCCAGTTCTCTATTACCATTGTTGCGGCGATGGTGCTGTCAGTACTGGTAGCGATGATCCTCACTCCGGCTCTGTGTGCCACACTACTTAAGCCACTGAAAAAAGGTGAGCATCATGGGCAAAAAGGCTTTTTTGCCTGGTTTAACCAGATGTTTAACCGCAACGCCGAACGCTACGAAAAAGGGGTGGCGAAAATTCTCCACCGTAGCCTGCGCTGGATTGTGATTTATGTCCTGCTGCTTGGCGGCATGGTGTTCCTGTTCCTGCGTTTGCCGACGTCGTTCTTACCGCTGGAAGACCGTGGCATGTTTACTACCTCGGTACAGTTGCCCAGCGGTTCAACGCAACAACAGACCCTGAAAGTCGTTGAGCAAATCGAGAAATACTACTTCACCCATGAAAAAGACAACATCATGTCGGTGTTTGCCACCGTTGGTTCTGGCCCTGGGGGTAACGGGCAAAACGTGGCGCGAATGTTTATCCGCCTGAAAGACTGGAGCGAACGCGACAGTAAGACCGGCACCTCGTTTGCCATTATCGAGCGTGCAACGAAGGCGTTTAACCAAATTAAAGAAGCTCGCGTTATCGCCAGCAGCCCGCCAGCAATTAGCGGTCTTGGTAGTTCTGCAGGTTTTGATATGGAGTTGCAGGACCACGCTGGAGCGGGTCACGATGCGCTGATGGCAGCACGTAATCAGTTGCTGGCGCTGGCGGCGGAAAACCCGGAGCTAACCCGTGTGCGCCATAACGGCCTCGACGACAGTCCGCAGTTGCAGATTGATATCGACCAGCGTAAAGCTCAGGCGCTGGGCGTTGCTATCGACGATATTAACGACACACTGCAAACCGCCTGGGGTTCGAGCTATGTGAATGACTTTATGGATCGCGGTCGCGTGAAGAAAGTCTATGTGCAGGCAGCTGCGCCGTATCGCATGCTGCCAGATGACATCAATCTCTGGTATGTCCGAAATAAAGATGGCGGCATGGTGCCCTTCTCTGCTTTCGCGACCTCACGCTGGGAAACAGGCTCGCCGCGTCTGGAACGCTATAACGGTTATTCTGCGGTTGAGATTGTTGGGGAAGCCGCACCGGGGGTCAGTACCGGTACGGCGATGGATATTATGGAATCGTTAGTGAAGCAGCTGCCAAACGGCTTTGGTCTGGAGTGGACGGCGATGTCGTATCAGGAGCGGCTTTCCGGCGCGCAGGCTCCGGCGCTGTACGCCATTTCCTTGCTGGTGGTATTCCTGTGTCTGGCTGCGTTGTATGAAAGCTGGTCGGTGCCGTTCTCGGTAATGCTGGTCGTGCCGCTGGGGGTAATCGGCGCGCTGCTGGCAACCTGGATGCGCGGGCTGGAAAACGACGTTTACTTCCAGGTGGGCCTGTTAACGGTCATTGGTTTATCGGCGAAAAACGCCATCCTGATCGTCGAGTTTGCTAACGAGATGAACCAAAAAGGCCACGACCTGTTTGAAGCGACGCTCCACGCCTGCCGTCAGCGTTTACGCCCGATTCTGATGACCTCGCTGGCATTTATCTTCGGCGTATTGCCAATGGCAACCAGCACGGGTGCCGGTTCCGGTGGTCAGCATGCGGTGGGTACTGGCGTAATGGGCGGGATGATTTCGGCCACTATTCTGGCTATTTACTTCGTGCCGCTGTTCTTTGTGCTGGTGCGCCGCCGCTTCCCGCTGAAGCCGCGCCCGGAATAA", - "dna_sequence_length": 3114, - "functions": [ - "aminoglycoside/multidrug efflux system" - ], - "id": "CDS_2450", - "location": [ - [ - "NC_000913", - 2587595, - "+", - 3114 - ] - ], - "md5": "cf5abcc14a99587deef9157c619c7bec", - "parent_gene": "", - "protein_md5": "b3af4f8eb03286d70cd6574827af45a9", - "protein_translation": "MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSGTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVASNIQDPLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLGGTPSVDKQALNATINAQSLLQTPEQFRDITLRVNQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVLAIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVLSVLVAMILTPALCATLLKPLKKGEHHGQKGFFAWFNQMFNRNAERYEKGVAKILHRSLRWIVIYVLLLGGMVFLFLRLPTSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFTHEKDNIMSVFATVGSGPGGNGQNVARMFIRLKDWSERDSKTGTSFAIIERATKAFNQIKEARVIASSPPAISGLGSSAGFDMELQDHAGAGHDALMAARNQLLALAAENPELTRVRHNGLDDSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGGMVPFSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQLPNGFGLEWTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEATLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVRRRFPLKPRPE", - "protein_translation_length": 1037, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:A5A621" - ], - [ - "gene_synonym", - "EcoGene:EG14396" - ], - [ - "gene_synonym", - "b4606" - ], - [ - "gene_synonym", - "ypfM" - ], - [ - "gene_synonym", - "YP_001165325.1" - ], - [ - "gene_synonym", - "GeneID:5061513" - ], - [ - "gene_synonym", - "GI:145698299" - ], - [ - "gene_synonym", - "ECK4415" - ] - ], - "dna_sequence": "ATGATTGAACGTGAACTGGGGAACTGGAAAGACTTTATCGAAGTTATGCTTCGTAAGTAA", - "dna_sequence_length": 60, - "functions": [ - "stress-induced small enterobacterial protein" - ], - "id": "CDS_2451", - "location": [ - [ - "NC_000913", - 2590866, - "-", - 60 - ] - ], - "md5": "fc6320328ce2ca9c87cebb1d054fdf9b", - "parent_gene": "", - "protein_md5": "d048e6a8d0de121dd80112bb5a3ecce7", - "protein_translation": "MIERELGNWKDFIEVMLRK", - "protein_translation_length": 19, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946953" - ], - [ - "gene_synonym", - "yffB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24178" - ], - [ - "gene_synonym", - "EcoGene:EG11147" - ], - [ - "gene_synonym", - "GI:16130396" - ], - [ - "gene_synonym", - "NP_416966.1" - ], - [ - "gene_synonym", - "ECK2466" - ], - [ - "gene_synonym", - "ASAP:ABE-0008140" - ], - [ - "gene_synonym", - "b2471" - ], - [ - "gene_synonym", - "JW2455" - ] - ], - "dna_sequence": "ATGGTTACACTTTACGGTATCAAAAATTGTGACACCATTAAAAAGGCTCGCCGTTGGCTGGAAGCCAATAACATCGACTATCGTTTTCATGATTACCGCGTCGATGGGCTGGACAGCGAATTATTGAACGATTTTATCAACGAATTAGGCTGGGAAGCGTTACTCAACACCCGTGGTACAACCTGGCGTAAACTGGACGAAACCACCCGCAATAAAATCACCGATGCGGCCTCTGCGGCGGCATTAATGACTGAAATGCCTGCAATTATCAAACGTCCATTGCTCTGCGTGCCCGGTAAGCCTATGCTGCTGGGTTTCAGTGATTCCAGTTATCAGCAATTTTTCCATGAGGTGTAG", - "dna_sequence_length": 357, - "functions": [ - "putative ArsC family reductase" - ], - "id": "CDS_2452", - "location": [ - [ - "NC_000913", - 2591247, - "+", - 357 - ] - ], - "md5": "6cd6825c82041842f636de5f55e346dc", - "parent_gene": "", - "protein_md5": "7c6060b4ddb269f82f872ce2cfb38a7c", - "protein_translation": "MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNDFINELGWEALLNTRGTTWRKLDETTRNKITDAASAAALMTEMPAIIKRPLLCVPGKPMLLGFSDSSYQQFFHEV", - "protein_translation_length": 118, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10208" - ], - [ - "gene_synonym", - "dapE" - ], - [ - "gene_synonym", - "ECK2467" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AED7" - ], - [ - "gene_synonym", - "GI:16130397" - ], - [ - "gene_synonym", - "NP_416967.1" - ], - [ - "gene_synonym", - "msgB" - ], - [ - "gene_synonym", - "JW2456" - ], - [ - "gene_synonym", - "b2472" - ], - [ - "gene_synonym", - "ASAP:ABE-0008142" - ], - [ - "gene_synonym", - "GeneID:948313" - ] - ], - "dna_sequence": "ATGTCGTGCCCGGTTATTGAGCTGACACAACAGCTTATTCGCCGCCCTTCCCTGAGTCCTGATGATGCAGGATGCCAGGCTTTGTTGATTGAACGTTTGCAGGCGATCGGTTTTACCGTTGAACGCATGGACTTTGCCGATACGCAGAATTTTTGGGCATGGCGTGGGCAGGGTGAAACGTTAGCCTTTGCCGGGCATACCGACGTGGTGCCGCCTGGCGACGCCGATCGTTGGATCAATCCCCCGTTTGAACCCACCATTCGTGACGGCATGTTATTCGGGCGCGGTGCGGCAGATATGAAAGGCTCGCTGGCGGCGATGGTGGTGGCGGCAGAACGTTTTGTCGCACAACATCCCAACCATACGGGGCGACTGGCATTTCTGATCACCTCTGATGAAGAAGCCAGTGCCCACAACGGTACGGTAAAAGTCGTCGAAGCGTTAATGGCACGTAATGAGCGTCTCGATTACTGCCTGGTTGGCGAACCGTCGAGTATCGAAGTGGTAGGTGATGTGGTGAAAAATGGTCGTCGCGGATCATTAACCTGCAACCTTACCATTCATGGCGTTCAGGGGCATGTTGCCTACCCACATCTGGCTGACAATCCGGTACATCGCGCAGCACCTTTCCTTAATGAATTAGTGGCTATTGAGTGGGATCAGGGCAATGAATTCTTCCCGGCGACCAGTATGCAGATTGCCAATATTCAGGCGGGAACGGGCAGTAACAACGTTATTCCGGGTGAACTGTTTGTGCAGTTTAACTTCCGCTTCAGCACCGAACTGACTGATGAGATGATCAAAGCGCAGGTGCTTGCCCTGCTTGAAAAACATCAACTGCGCTATACGGTGGATTGGTGGCTTTCCGGGCAGCCATTTTTGACCGCGCGCGGTAAACTGGTGGATGCGGTCGTTAACGCGGTTGAGCACTATAATGAAATTAAACCGCAGCTACTGACCACAGGCGGAACGTCCGACGGGCGCTTTATTGCCCGCATGGGGGCGCAGGTGGTGGAACTCGGGCCGGTCAATGCCACTATTCATAAAATTAATGAATGTGTGAACGCTGCCGACCTGCAGCTACTTGCCCGTATGTATCAACGTATCATGGAACAGCTCGTCGCCTGA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:Q2EET2" - ], - [ - "gene_synonym", - "ECK2468" - ], - [ - "gene_synonym", - "JW2457" - ], - [ - "gene_synonym", - "YP_588465.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0285068" - ] - ], - "dna_sequence": "ATGGACTGGCTGGCTAAATATTGGTGGATTCTGGTGATTGTCTTTTTGGTAGGCGTCCTGCTGAACGTGATTAAAGATCTCAAGCGCGTCGACCATAAGAAATTTCTCGCCAACAAGCCGGAGCTTCCCCCGCATCGTGATTTCAACGATAAGTGGGACGATGACGACGACTGGCCGAAAAAGGATCAACCGAAGAAGTAA", - "dna_sequence_length": 201, - "functions": [ - "putative membrane protein, UPF0370 family" - ], - "id": "CDS_2454", - "location": [ - [ - "NC_000913", - 2592762, - "+", - 201 - ] - ], - "md5": "8642f6fdd56f3416106007cf55ef4f68", - "parent_gene": "", - "protein_md5": "80a9dd33d587548bf4184d4111abf754", - "protein_translation": "MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPPHRDFNDKWDDDDDWPKKDQPKK", - "protein_translation_length": 66, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947571" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76561" - ], - [ - "gene_synonym", - "JW5396" - ], - [ - "gene_synonym", - "GI:90111441" - ], - [ - "gene_synonym", - "ypfH" - ], - [ - "gene_synonym", - "EcoGene:EG14195" - ], - [ - "gene_synonym", - "ECK2469" - ], - [ - "gene_synonym", - "b2473" - ], - [ - "gene_synonym", - "ASAP:ABE-0008145" - ], - [ - "gene_synonym", - "NP_416968.2" - ] - ], - "dna_sequence": "ATGAAACATGACCATTTTGTTGTTCAAAGCCCGGATAAACCTGCGCAACAGTTGTTACTGCTTTTCCACGGTGTCGGGGATAACCCGGTGGCAATGGGGGAAATAGGCAACTGGTTTGCACCGCTGTTTCCTGATGCGCTGGTGGTGAGTGTCGGTGGCGCGGAGCCGAGCGGTAATCCGGCGGGGCGTCAGTGGTTTTCGGTGCAGGGTATTACGGAAGATAATCGCCAGGCGCGTGTGGATGCGATCATGCCGACGTTTATTGAAACGGTGCGCTACTGGCAGAAACAGAGCGGAGTAGGGGCTAACGCCACGGCGCTCATCGGTTTCTCTCAAGGCGCGATTATGGTGCTGGAGAGCATTAAAGCCGAACCGGGCCTTGCTTCACGCGTCATTGCTTTTAACGGACGCTATGCGAGCCTGCCGGAAACTGCGTCTACAGCCACGACAATTCACCTGATTCATGGCGGTGAAGATCCGGTTATCGATCTGGCGCATGCGGTTGCGGCGCAGGAAGCGTTAATCAGTGCCGGTGGTGACGTGACGCTGGATATCGTGGAGGATTTAGGCCATGCGATCGACAATCGCAGTATGCAATTTGCCCTGGATCACTTGCGTTATACCATTCCGAAACATTATTTCGACGAAGCGCTAAGTGGCGGTAAGCCTGGCGATGATGATGTGATTGAAATGATGTAA", - "dna_sequence_length": 699, - "functions": [ - "palmitoyl-CoA esterase activity, uncertain physiological substrate" - ], - "id": "CDS_2455", - "location": [ - [ - "NC_000913", - 2593770, - "-", - 699 - ] - ], - "md5": "c05bd41839f0a63c2c384439f127523e", - "parent_gene": "", - "protein_md5": "18f7f6b826d0c97fef4671b3e2fa2ea8", - "protein_translation": "MKHDHFVVQSPDKPAQQLLLLFHGVGDNPVAMGEIGNWFAPLFPDALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGANATALIGFSQGAIMVLESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDPVIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEALSGGKPGDDDVIEMM", - "protein_translation_length": 232, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76562" - ], - [ - "gene_synonym", - "ypfI" - ], - [ - "gene_synonym", - "NP_416969.1" - ], - [ - "gene_synonym", - "ECK2470" - ], - [ - "gene_synonym", - "EcoGene:EG14196" - ], - [ - "gene_synonym", - "tmcA" - ], - [ - "gene_synonym", - "ASAP:ABE-0008150" - ], - [ - "gene_synonym", - "JW2459" - ], - [ - "gene_synonym", - "b2474" - ], - [ - "gene_synonym", - "GI:16130399" - ], - [ - "gene_synonym", - "GeneID:946053" - ] - ], - "dna_sequence": "ATGGCTGAACTGACTGCGCTTCACACATTAACAGCGCAAATGAAACGTGAAGGGATCCGCCGCTTGCTGGTGTTGAGCGGGGAAGAGGGTTGGTGTTTTGAGCATACTCTTAAGTTGCGTGATGCCTTACCTGGCGACTGGCTGTGGATTTCGCCGCGGCCAGATGCTGAAAACCACTGTTCTCCCTCGGCACTACAAACTTTACTTGGGCGCGAGTTCCGGCATGCGGTATTCGACGCCCGCCACGGCTTTGATGCCGCTGCCTTTGCCGCACTTAGCGGAACGTTGAAAGCGGGAAGCTGGCTGGTTTTGTTACTCCCTGTATGGGAAGAGTGGGAAAACCAACCTGATGCCGACTCGCTGCGCTGGAGTGATTGCCCTGACCCTATTGCGACGCCGCATTTTGTCCAGCATCTCAAACGCGTACTTACGGCGGATAACGAGGCTATCCTCTGGCGGCAAAACCAGCCATTCTCGTTGGCGCATTTTACTCCCCGTACTGACTGGTACCCCGCGACTGGCGCACCACAACCAGAACAACAGCAACTCTTAAAGCAGCTAATGACCATGCCGCCGGGCGTGGCAGCGGTAACGGCTGCGCGTGGGCGCGGTAAGTCGGCGTTGGCAGGGCAACTCATTTCTCGTATTGCGGGCAGAGCGATTGTCACCGCGCCCGCAAAAGCGTCAACGGATGTACTGGCACAATTTGCGGGCGAGAAGTTTCGCTTTATTGCGCCGGATGCCTTGTTAGCCAGCGATGAGCAAGCCGACTGGCTGGTGGTCGATGAAGCCGCAGCCATACCTGCGCCATTGTTGCATCAACTGGTATCGCGTTTTCCTCGAACGTTGTTAACCACTACGGTGCAGGGCTACGAAGGCACCGGACGTGGTTTTTTGCTGAAATTTTGCGCTCGCTTTCCGCATTTACACCGTTTTGAACTGCAACAGCCGATCCGCTGGGCGCAGGGATGCCCGCTGGAAAAAATGGTCAGCGAGGCACTGGTTTTTGACGATGAAAACTTCACCCATACACCACAAGGCAATATTGTCATTTCCGCATTTGAACAGACGTTATGGCAAAGCGATCCAGAAACGCCGTTAAAGGTTTATCAGCTCTTGTCTGGTGCGCACTATCGGACTTCGCCGCTGGATTTACGCCGGATGATGGATGCACCAGGGCAACATTTTTTACAGGCGGCTGGCGAAAACGAGATTGCCGGGGCGCTGTGGCTGGTGGATGAGGGTGGATTATCTCAACAACTCAGTCAGGCGGTATGGGCAGGTTTTCGTCGCCCGCGGGGTAATCTGGTGGCCCAGTCGCTGGCGGCGCACGGCAACAATCCACTGGCGGCGACATTGCGTGGACGGCGGGTCAGCCGGATAGCAGTTCATCCGGCTCGTCAGCGGGAAGGCACAGGGCGGCAACTTATTGCTGGTGCTTTGCAATATACGCAAGACCTCGACTATCTTTCGGTGAGTTTTGGTTACACCGGGGAGTTATGGCGTTTCTGGCAACGCTGCGGTTTTGTGCTGGTGCGGATGGGTAATCATCGGGAAGCCAGCAGCGGTTGCTATACGGCGATGGCGCTGTTACCGATGAGTGATGCGGGTAAACAGCTGGCTGAACGTGAGCATTACCGTTTACGTCGCGATGCGCAAGCTCTCGCGCAGTGGAATGGCGAAACGCTTCCTGTTGATCCACTAAACGATGCCGTCCTTTCTGACGACGACTGGCTTGAACTGGCCGGTTTTGCTTTCGCTCATCGTCCGCTATTAACGTCGTTAGGTTGCTTATTGCGTCTGTTACAAACCAGTGAACTGGCATTACCGGCGCTGCGTGGGCGTTTACAGAAAAACGCCAGTGATGCGCAGTTATGTACCACACTTAAACTTTCAGGCCGCAAGATGTTACTGGTCCGTCAGCGGGAAGAGGCCGCGCAGGCGCTGTTCGCACTTAATGATGTTCGCACTGAGCGTCTGCGCGATCGCATAACGCAATGGCAATTATTTCACTGA", 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"MAELTALHTLTAQMKREGIRRLLVLSGEEGWCFEHTLKLRDALPGDWLWISPRPDAENHCSPSALQTLLGREFRHAVFDARHGFDAAAFAALSGTLKAGSWLVLLLPVWEEWENQPDADSLRWSDCPDPIATPHFVQHLKRVLTADNEAILWRQNQPFSLAHFTPRTDWYPATGAPQPEQQQLLKQLMTMPPGVAAVTAARGRGKSALAGQLISRIAGRAIVTAPAKASTDVLAQFAGEKFRFIAPDALLASDEQADWLVVDEAAAIPAPLLHQLVSRFPRTLLTTTVQGYEGTGRGFLLKFCARFPHLHRFELQQPIRWAQGCPLEKMVSEALVFDDENFTHTPQGNIVISAFEQTLWQSDPETPLKVYQLLSGAHYRTSPLDLRRMMDAPGQHFLQAAGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPRGNLVAQSLAAHGNNPLAATLRGRRVSRIAVHPARQREGTGRQLIAGALQYTQDLDYLSVSFGYTGELWRFWQRCGFVLVRMGNHREASSGCYTAMALLPMSDAGKQLAEREHYRLRRDAQALAQWNGETLPVDPLNDAVLSDDDWLELAGFAFAHRPLLTSLGCLLRLLQTSELALPALRGRLQKNASDAQLCTTLKLSGRKMLLVRQREEAAQALFALNDVRTERLRDRITQWQLFH", - "protein_translation_length": 671, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130400" - ], - [ - "gene_synonym", - "GeneID:946956" - ], - [ - "gene_synonym", - "JW2460" - ], - [ - "gene_synonym", - "ypfJ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64429" - ], - [ - "gene_synonym", - "NP_416970.1" - ], - [ - "gene_synonym", - "ECK2471" - ], - [ - "gene_synonym", - "ASAP:ABE-0008153" - ], - [ - "gene_synonym", - "b2475" - ], - [ - "gene_synonym", - "EcoGene:EG14197" - ] - ], - "dna_sequence": "ATGCGTTGGCAAGGGCGACGTGAAAGTGACAATGTTGAAGACAGGCGCAACAGCTCTGGTGGTCCATCTATGGGCGGTCCCGGTTTTCGCCTGCCAAGCGGTAAAGGCGGGCTGATTTTACTGATAGTCGTGCTGGTTGCAGGCTACTATGGTGTTGATTTAACCGGGTTGATGACCGGGCAGCCGGTTTCCCAACAACAATCAACGCGGTCAATTAGCCCAAATGAAGACGAAGCCGCAAAATTCACCTCGGTGATTCTGGCAACCACGGAAGACACCTGGGGACAACAGTTCGAGAAGATGGGTAAGACCTATCAGCAACCGAAGCTGGTCATGTACCGTGGAATGACGCGTACCGGCTGCGGGGCGGGCCAGTCCATAATGGGGCCGTTCTATTGCCCGGCGGATGGCACGGTTTATATCGATCTCTCCTTCTATGATGACATGAAAGACAAACTTGGCGCGGATGGCGATTTTGCCCAGGGGTACGTTATCGCCCATGAAGTCGGTCATCATGTGCAGAAACTGTTAGGCATCGAGCCGAAAGTTCGTCAACTGCAACAAAACGCGACGCAGGCGGAAGTAAACCGCTTATCTGTGCGTATGGAACTCCAGGCCGACTGTTTTGCCGGTGTCTGGGGGCATAGTATGCAGCAGCAAGGCGTTCTGGAAACCGGCGATCTGGAAGAGGCGCTGAACGCGGCGCAGGCCATCGGCGATGACCGTTTACAACAGCAAAGTCAGGGGCGAGTAGTACCAGACAGTTTCACTCATGGCACTTCTCAGCAACGCTACAGCTGGTTTAAACGTGGTTTCGACAGCGGCGATCCGGCACAATGCAATACTTTTGGTAAAAGCATTTAA", - "dna_sequence_length": 864, - "functions": [ - "putative neutral zinc metallopeptidase" - ], - "id": "CDS_2457", - "location": [ - [ - "NC_000913", - 2596737, - "-", - 864 - ] - ], - "md5": "6afe8286c32d38e0b472887d6659018d", - "parent_gene": "", - "protein_md5": "79de25710027b9941b278a537a881745", - "protein_translation": "MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVVLVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMGKTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFAQGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHSMQQQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGDPAQCNTFGKSI", - "protein_translation_length": 287, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130401" - ], - [ - "gene_synonym", - "JW2461" - ], - [ - "gene_synonym", - "GeneID:946957" - ], - [ - "gene_synonym", - "NP_416971.1" - ], - [ - "gene_synonym", - "EcoGene:EG10791" - ], - [ - "gene_synonym", - "purC" - ], - [ - "gene_synonym", - "ECK2472" - ], - [ - "gene_synonym", - "ade" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7D7" - ], - [ - "gene_synonym", - "ASAP:ABE-0008156" - ], - [ - "gene_synonym", - "b2476" - ] - ], - "dna_sequence": "ATGCAAAAGCAAGCTGAGTTGTATCGTGGTAAAGCGAAAACCGTATACAGCACGGAAAACCCGGACCTGTTGGTGCTCGAATTCCGCAATGATACGTCAGCAGGGGATGGCGCGCGCATTGAGCAGTTTGATCGCAAAGGTATGGTGAACAACAAGTTCAACTACTTCATTATGAGCAAACTGGCTGAAGCGGGTATCCCGACTCAAATGGAGCGTCTGCTCTCCGATACCGAATGTCTGGTGAAAAAGCTGGATATGGTGCCGGTTGAGTGTGTCGTGCGTAACCGTGCTGCTGGCTCTCTGGTGAAACGTCTTGGAATCGAAGAAGGTATTGAGCTGAACCCGCCGCTGTTCGATCTGTTCCTGAAAAACGACGCCATGCACGATCCGATGGTCAACGAATCTTACTGCGAAACCTTTGGCTGGGTGAGCAAAGAGAACCTGGCGCGTATGAAAGAGCTGACCTACAAAGCGAACGACGTGCTGAAAAAACTGTTCGATGATGCTGGTCTGATTCTGGTCGACTTCAAGCTGGAATTTGGTCTGTACAAAGGCGAAGTGGTACTGGGTGATGAGTTCTCCCCGGACGGTAGCCGCCTGTGGGACAAAGAAACGCTGGAGAAAATGGACAAAGACCGTTTCCGCCAGAGCCTCGGTGGCCTGATCGAAGCCTATGAAGCCGTCGCCCGCCGCCTGGGTGTACAGCTGGACTGA", - "dna_sequence_length": 714, - "functions": [ - "phosphoribosylaminoimidazole-succinocarboxamide synthetase" - ], - "id": "CDS_2458", - "location": [ - [ - "NC_000913", - 2597618, - "-", - 714 - ] - ], - "md5": "95a9ddc09a24979784021e2853dabb25", - "parent_gene": "", - "protein_md5": "b3550340b861a18dbbd2e853824eb6ea", - "protein_translation": "MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNYFIMSKLAEAGIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLVKRLGIEEGIELNPPLFDLFLKNDAMHDPMVNESYCETFGWVSKENLARMKELTYKANDVLKKLFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLEKMDKDRFRQSLGGLIEAYEAVARRLGVQLD", - "protein_translation_length": 237, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "nlpB" - ], - [ - "gene_synonym", - "GeneID:946954" - ], - [ - "gene_synonym", - "JW2462" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A903" - ], - [ - "gene_synonym", - "EcoGene:EG10658" - ], - [ - "gene_synonym", - "bamC" - ], - [ - "gene_synonym", - "ECK2473" - ], - [ - "gene_synonym", - "ASAP:ABE-0008161" - ], - [ - "gene_synonym", - "GI:90111442" - ], - [ - "gene_synonym", - "NP_416972.4" - ], - [ - "gene_synonym", - "dapX" - ], - [ - "gene_synonym", - "b2477" - ] - ], - "dna_sequence": "ATGGCTTACTCTGTTCAAAAGTCGCGCCTGGCAAAGGTTGCGGGTGTTTCGCTTGTTTTATTACTCGCTGCCTGTAGTTCTGACTCACGCTATAAGCGTCAGGTCAGTGGTGATGAAGCCTACCTGGAAGCGGCACCGCTTGCGGAGCTTCATGCCCCGGCTGGAATGATTTTGCCGGTGACCTCCGGTGATTATGCAATCCCGGTGACCAACGGTAGTGGTGCTGTCGGTAAGGCGCTGGACATTCGTCCACCAGCCCAGCCGCTGGCACTGGTTTCTGGCGCGCGTACCCAGTTCACGGGCGATACCGCTTCATTGCTGGTGGAAAATGGTCGTGGCAATACTCTGTGGCCGCAGGTGGTTAGCGTGCTGCAGGCGAAAAACTACACCATCACCCAACGTGATGATGCTGGTCAGACACTGACCACCGATTGGGTACAATGGAACCGTCTGGACGAAGACGAGCAGTATCGTGGTCGTTATCAAATCTCTGTTAAGCCGCAGGGTTATCAGCAGGCGGTTACGGTTAAACTGCTGAACCTGGAACAGGCGGGCAAACCGGTTGCAGACGCGGCTTCCATGCAGCGTTACAGCACGGAGATGATGAACGTTATTTCCGCCGGTCTGGATAAATCTGCCACTGACGCCGCGAACGCTGCGCAAAATCGTGCCTCCACCACTATGGACGTACAAAGTGCAGCTGATGACACCGGTTTACCAATGCTGGTCGTACGCGGGCCGTTCAATGTGGTTTGGCAACGTCTGCCAGCGGCGCTGGAAAAAGTGGGCATGAAAGTGACCGACAGCACCCGTTCGCAGGGCAACATGGCCGTAACTTATAAGCCGCTGTCTGACAGCGACTGGCAGGAACTGGGCGCGAGCGATCCAGGCCTGGCATCCGGTGACTATAAACTGCAGGTTGGCGATTTAGATAACCGCAGCAGCCTACAGTTCATCGATCCGAAAGGTCATACTCTGACTCAGAGTCAGAACGACGCGCTGGTAGCTGTCTTCCAGGCTGCGTTTAGCAAGTAA", - "dna_sequence_length": 1035, - "functions": [ - "BamABCDE complex OM biogenesis lipoprotein" - ], - "id": "CDS_2459", - "location": [ - [ - "NC_000913", - 2598865, - "-", - 1035 - ] - ], - "md5": "fb59fa3eb62acbb78a62e45da411770e", - "parent_gene": "", - "protein_md5": "8d841e0474b30257f6ea30847a91b30a", - "protein_translation": "MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFTGDTASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAANAAQNRASTTMDVQSAADDTGLPMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFSK", - "protein_translation_length": 344, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "dapA" - ], - [ - "gene_synonym", - "ASAP:ABE-0008163" - ], - [ - "gene_synonym", - "GeneID:946952" - ], - [ - "gene_synonym", - "GI:16130403" - ], - [ - "gene_synonym", - "JW2463" - ], - [ - "gene_synonym", - "EcoGene:EG10205" - ], - [ - "gene_synonym", - "b2478" - ], - [ - "gene_synonym", - "ECK2474" - ], - [ - "gene_synonym", - "NP_416973.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6L2" - ] - ], - "dna_sequence": "ATGTTCACGGGAAGTATTGTCGCGATTGTTACTCCGATGGATGAAAAAGGTAATGTCTGTCGGGCTAGCTTGAAAAAACTGATTGATTATCATGTCGCCAGCGGTACTTCGGCGATCGTTTCTGTTGGCACCACTGGCGAGTCCGCTACCTTAAATCATGACGAACATGCTGATGTGGTGATGATGACGCTGGATCTGGCTGATGGGCGCATTCCGGTAATTGCCGGGACCGGCGCTAACGCTACTGCGGAAGCCATTAGCCTGACGCAGCGCTTCAATGACAGTGGTATCGTCGGCTGCCTGACGGTAACCCCTTACTACAATCGTCCGTCGCAAGAAGGTTTGTATCAGCATTTCAAAGCCATCGCTGAGCATACTGACCTGCCGCAAATTCTGTATAATGTGCCGTCCCGTACTGGCTGCGATCTGCTCCCGGAAACGGTGGGCCGTCTGGCGAAAGTAAAAAATATTATCGGAATCAAAGAGGCAACAGGGAACTTAACGCGTGTAAACCAGATCAAAGAGCTGGTTTCAGATGATTTTGTTCTGCTGAGCGGCGATGATGCGAGCGCGCTGGACTTCATGCAATTGGGCGGTCATGGGGTTATTTCCGTTACGGCTAACGTCGCAGCGCGTGATATGGCCCAGATGTGCAAACTGGCAGCAGAAGGGCATTTTGCCGAGGCACGCGTTATTAATCAGCGTCTGATGCCATTACACAACAAACTATTTGTCGAACCCAATCCAATCCCGGTGAAATGGGCATGTAAGGAACTGGGTCTTGTGGCGACCGATACGCTGCGCCTGCCAATGACACCAATCACCGACAGTGGTCGTGAGACGGTCAGAGCGGCGCTTAAGCATGCCGGTTTGCTGTAA", - "dna_sequence_length": 879, - "functions": [ - "dihydrodipicolinate synthase" - ], - "id": "CDS_2460", - "location": [ - [ - "NC_000913", - 2599760, - "-", - 879 - ] - ], - "md5": "2da26ffa335d9eb4492c1a47a0e0db23", - "parent_gene": "", - "protein_md5": "82bf9d8da90be8f700df586b4387bc0e", - "protein_translation": "MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGIKEATGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLMPLHNKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITDSGRETVRAALKHAGLL", - "protein_translation_length": 292, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946950" - ], - [ - "gene_synonym", - "yffD" - ], - [ - "gene_synonym", - "GI:90111443" - ], - [ - "gene_synonym", - "NP_416974.4" - ], - [ - "gene_synonym", - "gcvR" - ], - [ - "gene_synonym", - "b2479" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9I3" - ], - [ - "gene_synonym", - "JW2464" - ], - [ - "gene_synonym", - "ECK2475" - ], - [ - "gene_synonym", - "ASAP:ABE-0008168" - ], - [ - "gene_synonym", - "EcoGene:EG11149" - ] - ], - "dna_sequence": "TTGACACTGTCATCGCAACATTATCTGGTGATCACTGCGTTGGGTGCCGATCGCCCTGGAATTGTGAACACCATCACCCGTCATGTCAGTAGTTGCGGCTGTAATATTGAAGACAGTCGCCTGGCGATGCTGGGAGAAGAGTTCACGTTTATTATGCTGCTTTCCGGTTCATGGAATGCCATTACTCTGATTGAATCAACGTTACCGTTGAAAGGTGCCGAACTGGATCTTTTAATCGTGATGAAGCGCACGACGGCGCGTCCGCGTCCGCCAATGCCAGCATCTGTCTGGGTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTCGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGAGCAAGCGTTCAAAGCCCTATGTACAGAACTCAATGCACAAGGCAGTATTAACGTCGTCAATTATTCCCAACATGATGAACAGGATGGAGTTAAGTAA", - "dna_sequence_length": 573, - "functions": [ - "transcriptional repressor, regulatory protein accessory to GcvA" - ], - "id": "CDS_2461", - "location": [ - [ - "NC_000913", - 2599906, - "+", - 573 - ] - ], - "md5": "c2141b9984ff72394941ca3db6a6ab9d", - "parent_gene": "", - "protein_md5": "8f4568e7bff9d7f98a188c458f65e195", - "protein_translation": "MTLSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAMLGEEFTFIMLLSGSWNAITLIESTLPLKGAELDLLIVMKRTTARPRPPMPASVWVQVDVADSPHLIERFTALFDAHHMNIAELVSRTQPAENERAAQLHIQITAHSPASADAANIEQAFKALCTELNAQGSINVVNYSQHDEQDGVK", - "protein_translation_length": 190, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2465" - ], - [ - "gene_synonym", - "GI:16130405" - ], - [ - "gene_synonym", - "EcoGene:EG10108" - ], - [ - "gene_synonym", - "GeneID:946949" - ], - [ - "gene_synonym", - "NP_416975.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008171" - ], - [ - "gene_synonym", - "b2480" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE52" - ], - [ - "gene_synonym", - "bcp" - ], - [ - "gene_synonym", - "ECK2476" - ] - ], - "dna_sequence": "ATGAATCCACTGAAAGCCGGTGATATCGCACCGAAATTTAGCTTGCCGGATCAAGACGGAGAACAAGTTAATTTGACCGACTTCCAGGGACAGCGTGTTCTGGTTTATTTCTACCCGAAAGCCATGACCCCCGGCTGTACCGTACAGGCCTGCGGCTTACGCGATAACATGGATGAGTTGAAAAAAGCGGGCGTTGATGTGCTGGGTATCAGCACCGATAAACCCGAAAAACTCTCCCGTTTTGCGGAAAAAGAGCTGCTTAACTTTACGCTCCTGTCTGATGAGGACCACCAGGTGTGCGAACAATTCGGCGTCTGGGGTGAAAAGTCCTTCATGGGCAAAACCTACGATGGCATTCATCGCATCAGCTTCCTGATTGACGCTGATGGCAAAATCGAACATGTCTTTGACGATTTCAAAACCAGCAATCACCACGACGTTGTGCTGAACTGGCTGAAAGAACACGCCTGA", - "dna_sequence_length": 471, - "functions": [ - "peroxiredoxin", - "thiol peroxidase, thioredoxin-dependent" - ], - "id": "CDS_2462", - "location": [ - [ - "NC_000913", - 2600478, - "+", - 471 - ] - ], - "md5": "10299594ea757d2e178dff8dd5382a1e", - "parent_gene": "", - "protein_md5": "d0a863af2c08e2bba635085fb5147e18", - "protein_translation": "MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQFGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDDFKTSNHHDVVLNWLKEHA", - "protein_translation_length": 156, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11150" - ], - [ - "gene_synonym", - "JW2466" - ], - [ - "gene_synonym", - "yffE" - ], - [ - "gene_synonym", - "GI:90111444" - ], - [ - "gene_synonym", - "GeneID:946959" - ], - [ - "gene_synonym", - "hyfA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23481" - ], - [ - "gene_synonym", - "ECK2477" - ], - [ - "gene_synonym", - "NP_416976.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0008179" - ], - [ - "gene_synonym", - "b2481" - ] - ], - "dna_sequence": "ATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATACCTGTCTCGCTGCCTGTTCGGACGTGCATAAAACGCAAGGTTTACAGCAACACCCGCGCCTGGCCCTGGCGAAGACGTCAACAATCACTGCCCCTGTCGTGTGTCATCACTGTGAGGAAGCCCCTTGCCTGCAGGTCTGCCCGGTCAATGCCATCTCTCAGAGGGATGATGCGATCCAACTCAACGAAAGCCTCTGTATTGGCTGCAAGCTTTGCGCCGTGGTCTGCCCATTTGGCGCAATCAGCGCTTCAGGAAGCCGTCCGGTGAATGCCCATGCGCAATATGTTTTTCAGGCTGAAGGCTCACTCAAAGACGGCGAAGAAAACGCGCCAACACAACATGCTTTGCTGCGCTGGGAACCTGGTGTCCAGACCGTCGCGGTGAAATGCGACCTGTGTGATTTCTTGCCAGAAGGTCCGGCCTGCGTTCGCGCTTGCCCGAATCAGGCGTTACGGCTGATCACCGGTGATAGCCTGCAACGTCAGATGAAAGAAAAACAGCGCCTTGCCGCAAGCTGGTTTGCCAATGGCGGGGAGGATCCCCTTTCCCTCACTCAGGAGCAACGCTAA", - "dna_sequence_length": 618, - "functions": [ - "hydrogenase 4, 4Fe-4S subunit" - ], - "id": "CDS_2463", - "location": [ - [ - "NC_000913", - 2601201, - "+", - 618 - ] - ], - "md5": "d64957812e010d4824ac534d72692ec1", - "parent_gene": "", - "protein_md5": "8c2e647e869249f3c4eac461ce093f51", - "protein_translation": "MNRFVVAEPLWCTGCNTCLAACSDVHKTQGLQQHPRLALAKTSTITAPVVCHHCEEAPCLQVCPVNAISQRDDAIQLNESLCIGCKLCAVVCPFGAISASGSRPVNAHAQYVFQAEGSLKDGEENAPTQHALLRWEPGVQTVAVKCDLCDFLPEGPACVRACPNQALRLITGDSLQRQMKEKQRLAASWFANGGEDPLSLTQEQR", - "protein_translation_length": 205, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2467" - ], - [ - "gene_synonym", - "yffF" - ], - [ - "gene_synonym", - "EcoGene:EG11282" - ], - [ - "gene_synonym", - "GI:16130407" - ], - [ - "gene_synonym", - "GeneID:946961" - ], - [ - "gene_synonym", - "hyfB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23482" - ], - [ - "gene_synonym", - "b2482" - ], - [ - "gene_synonym", - "ECK2478" - ], - [ - "gene_synonym", - "ASAP:ABE-0008181" - ], - [ - "gene_synonym", - "NP_416977.1" - ] - ], - "dna_sequence": "ATGGATGCCCTGCAATTATTAACCTGGTCGCTGATTCTCTATCTGTTTGCTAGTCTGGCTTCGCTGTTTTTACTCGGTCTGGACAGACTGGCTATTAAGCTTTCCGGCATCACATCGCTGGTGGGCGGCGTGATTGGCATCATCAGCGGAATTACGCAATTACATGCTGGTGTAACTTTAGTCGCCCGTTTTGCCCCCCCTTTTGAATTTGCCGATTTAACCCTGCGAATGGATAGCCTCTCGGCATTTATGGTGCTGGTTATCTCCTTGCTGGTGGTGGTTTGTTCTCTCTATTCATTGACTTATATGCGCGAATACGAGGGCAAAGGCGCGGCGGCGATGGGCTTCTTTATGAATATTTTCATCGCATCGATGGTTGCCCTGCTGGTGATGGACAACGCTTTTTGGTTCATCGTGCTGTTTGAAATGATGTCGCTGTCTTCCTGGTTTCTGGTCATTGCCAGGCAGGATAAAACGTCGATCAACGCTGGCATGCTCTACTTTTTTATCGCCCACGCCGGATCGGTGCTGATAATGATCGCCTTCTTGCTGATGGGGCGCGAAAGCGGCAGCCTCGATTTTGCCAGTTTCCGCACGCTTTCACTTTCTCCGGGGCTGGCGTCGGCGGTGTTCCTGCTGGCCTTTTTCGGTTTTGGCGCGAAAGCCGGGATGATGCCGTTGCACAGCTGGTTGCCGCGCGCTCACCCTGCCGCACCATCGCACGCTTCGGCGTTGATGTCTGGCGTAATGGTCAAAATAGGTATTTTCGGCATCCTGAAAGTAGCGATGGATCTGCTGGCGCAAACGGGTTTGCCTCTGTGGTGGGGCATTCTGGTGATGGCGATCGGCGCAATCTCCGCGCTCCTGGGCGTGCTATATGCGCTGGCGGAACAGGATATCAAACGGCTGCTGGCCTGGAGTACCGTCGAAAACGTCGGCATTATTTTGCTGGCAGTCGGTGTGGCGATGGTCGGTCTGTCACTGCACGACCCGCTGCTCACCGTGGTTGGACTGCTCGGCGCACTGTTTCATCTGCTCAACCATGCGCTGTTCAAAGGGCTGCTATTTCTCGGCGCGGGAGCGATTATTTCGCGTTTGCATACCCACGACATGGAAAAAATGGGGGCACTAGCGAAACGGATGCCGTGGACAGCCGCAGCATGCCTGATTGGTTGCCTCGCGATATCAGCCATTCCTCCGCTGAATGGTTTTATCAGCGAATGGTACACCTGGCAGTCGCTGTTCTCACTAAGTCGTGTGGAAGCCGTAGCGCTACAACTTGCGGGTCCTATTGCTATGGTAATGCTGGCAGTCACTGGTGGGCTGGCAGTAATGTGCTTCGTAAAAATGTACGGTATTACTTTCTGTGGTGCGCCGCGCAGTACACACGCTGAAGAGGCACAGGAAGTGCCAAATACGATGATCGTCGCCATGCTACTGCTCGCGGCACTCTGCGTATTAATTGCGCTTAGTGCCAGTTGGCTGGCACCGAAGATAATGCATATTGCCCATGCGTTTACCAATACCCCTCCCGCCACTGTCGCCAGCGGAATAGCACTTGTACCCGGCACGTTTCATACACAGGTCACCCCCTCATTACTGTTGCTGTTACTACTGGCGATGCCTTTGCTGCCTGGCCTTTACTGGCTGTGGTGTCGTTCGCGCCGCGCAGCGTTTCGTCGCACAGGAGATGCCTGGGCATGCGGCTACGGCTGGGAAAATGCGATGGCCCCGTCAGGCAATGGCGTGATGCAGCCGCTGCGTGTGGTCTTTTCTGCGCTATTTCGTCTACGACAACAGCTCGACCCTACGCTGAGGCTAAATAAAGGTCTTGCGCACGTCACCGCCAGGGCTCAGAGCACAGAACCCTTCTGGGATGAGCGGGTGATCCGCCCCATCGTGAGCGCCACCCAACGGCTGGCCAAAGAAATACAGCATCTGCAAAGCGGCGACTTTCGTCTCTATTGCCTGTATGTGGTCGCCGCACTGGTTGTGCTGCTAATCGCTATTGCCGTCTAA", - "dna_sequence_length": 2019, - "functions": [ - "hydrogenase 4, membrane subunit" - ], - "id": "CDS_2464", - "location": [ - [ - "NC_000913", - 2601818, - "+", - 2019 - ] - ], - "md5": "257939f1392e960700fd440bd51d07b3", - "parent_gene": "", - "protein_md5": "1c593f34546633d48b8d40c359272f83", - "protein_translation": "MDALQLLTWSLILYLFASLASLFLLGLDRLAIKLSGITSLVGGVIGIISGITQLHAGVTLVARFAPPFEFADLTLRMDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFWFIVLFEMMSLSSWFLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLDFASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGVMVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTVENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTHDMEKMGALAKRMPWTAAACLIGCLAISAIPPLNGFISEWYTWQSLFSLSRVEAVALQLAGPIAMVMLAVTGGLAVMCFVKMYGITFCGAPRSTHAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALVPGTFHTQVTPSLLLLLLLAMPLLPGLYWLWCRSRRAAFRRTGDAWACGYGWENAMAPSGNGVMQPLRVVFSALFRLRQQLDPTLRLNKGLAHVTARAQSTEPFWDERVIRPIVSATQRLAKEIQHLQSGDFRLYCLYVVAALVVLLIAIAV", - "protein_translation_length": 672, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111445" - ], - [ - "gene_synonym", - "hyfC" - ], - [ - "gene_synonym", - "JW2468" - ], - [ - "gene_synonym", - "EcoGene:EG14211" - ], - [ - "gene_synonym", - "NP_416978.4" - ], - [ - "gene_synonym", - "GeneID:947492" - ], - [ - "gene_synonym", - "b2483" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77858" - ], - [ - "gene_synonym", - "ECK2479" - ], - [ - "gene_synonym", - "ASAP:ABE-0008183" - ] - ], - "dna_sequence": "ATGAGACAAACTCTTTGCGACGGATATCTGGTCATTTTTGCGTTAGCACAGGCCGTGATTCTGCTGATGCTAACCCCACTTTTTACGGGTATTTCCCGGCAGATACGCGCGCGTATGCACTCCCGCCGCGGGCCGGGGATCTGGCAGGATTATCGCGATATCCACAAACTGTTTAAACGCCAGGAAGTTGCGCCGACATCTTCAGGTCTGATGTTCCGCCTGATGCCGTGGGTATTAATCAGCAGCATGCTGGTGCTGGCGATGGCCTTACCACTGTTTATTACCGTTTCCCCTTTTGCGGGCGGCGGCGATCTGATCACCCTTATCTATCTTCTTGCCCTGTTTCGTTTTTTCTTTGCTCTTTCCGGGCTGGATACCGGAAGTCCGTTTGCGGGAGTCGGTGCCAGTCGCGAGTTGACGCTCGGCATTCTGGTCGAACCAATGCTTATTCTCTCACTGCTGGTATTGGCGCTGATAGCAGGTTCCACGCATATCGAGATGATCAGCAATACGCTGGCGATGGGCTGGAACTCGCCGCTAACCACCGTACTGGCGTTACTGGCCTGTGGTTTTGCCTGCTTCATTGAGATGGGAAAAATTCCCTTTGATGTTGCTGAAGCAGAACAGGAATTACAGGAAGGCCCGCTGACCGAATATTCCGGTGCCGGGCTGGCGCTAGCGAAATGGGGGCTGGGGCTGAAACAGGTCGTGATGGCATCACTGTTTGTGGCCCTGTTTCTGCCCTTTGGGCGCGCGCAAGAACTTTCTCTCGCCTGCCTGCTGACTTCACTTGTCGTTACGCTGCTCAAGGTTTTGCTGATTTTTGTACTGGCCTCAATCGCAGAAAACACGCTGGCACGCGGGCGTTTTTTACTCATTCACCATGTGACCTGGCTTGGCTTCAGCCTTGCTGCGCTTGCATGGGTCTTCTGGTTAACCGGTCTGTAA", - "dna_sequence_length": 948, - "functions": [ - "hydrogenase 4, membrane subunit" - ], - "id": "CDS_2465", - "location": [ - [ - "NC_000913", - 2603847, - "+", - 948 - ] - ], - "md5": "9aabde4c1f3b23b373c7aa5dfd920004", - "parent_gene": "", - "protein_md5": "610946c1e49db3658be5403446824b1e", - "protein_translation": "MRQTLCDGYLVIFALAQAVILLMLTPLFTGISRQIRARMHSRRGPGIWQDYRDIHKLFKRQEVAPTSSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGGGDLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIAGSTHIEMISNTLAMGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTEYSGAGLALAKWGLGLKQVVMASLFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFVLASIAENTLARGRFLLIHHVTWLGFSLAALAWVFWLTGL", - "protein_translation_length": 315, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77416" - ], - [ - "gene_synonym", - "GI:16130409" - ], - [ - "gene_synonym", - "JW2469" - ], - [ - "gene_synonym", - "hyfD" - ], - [ - "gene_synonym", - "b2484" - ], - [ - "gene_synonym", - "NP_416979.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008185" - ], - [ - "gene_synonym", - "EcoGene:EG14212" - ], - [ - "gene_synonym", - "GeneID:947290" - ], - [ - "gene_synonym", - "ECK2480" - ] - ], - "dna_sequence": "ATGGAAAATCTTGCTCTGACGACGTTATTGCTGCCTTTTATCGGCGCACTGGTCGTTTCGTTTTCGCCACAACGTCGGGCCGCCGAATGGGGGGTTTTGTTCGCCGCGCTGACCACGCTGTGCATGTTGTCACTGATCTCCGCGTTTTATCAGGCCGATAAAGTTGCCGTCACGTTGACGTTGGTCAACGTGGGGGATGTGGCGTTGTTTGGCCTGGTCATTGATCGCGTGAGTACGCTGATTCTGTTTGTGGTGGTGTTTCTCGGTTTGCTGGTCACGATCTACTCCACGGGTTATCTGACGGATAAAAATCGCGAACACCCGCATAACGGCACGAATCGTTATTACGCATTTTTACTGGTGTTTATCGGCGCGATGGCGGGACTGGTACTCTCCTCGACGCTGCTCGGTCAGTTGTTGTTTTTTGAAATTACAGGCGGCTGCTCCTGGGCGTTGATCAGTTATTACCAGAGCGATAAAGCGCAGCGTTCAGCACTAAAAGCGTTACTTATCACTCATATCGGCTCGTTGGGGTTGTATCTTGCCGCCGCCACGCTGTTTTTGCAGACCGGAACGTTTGCGCTTAGCGCGATGAGCGAGTTACACGGCGACGCACGTTATCTGGTTTATGGCGGCATCCTGTTTGCCGCGTGGGGGAAATCGGCCCAGCTACCGATGCAAGCGTGGCTACCGGACGCAATGGAAGCGCCAACACCGATCAGCGCCTATCTCCACGCCGCATCGATGGTGAAAGTGGGCGTTTACATTTTTGCCCGCGCTATTATCGACGGCGGCAATATCCCGCATGTGATTGGCGGCGTTGGCATGGTCATGGCACTGGTCACCATTCTTTATGGCTTTCTGATGTATTTGCCACAGCAGGATATGAAGCGGTTGCTAGCCTGGTCGACCATCACTCAACTTGGCTGGATGTTCTTCGGCTTGTCGCTCTCCATCTTCGGCTCGCGGCTGGCGCTGGAGGGCAGCATCGCCTACATCGTCAACCACGCGTTCGCTAAAAGCCTGTTTTTCCTTGTAGCAGGTGCGCTGAGTTACAGCTGCGGCACGCGCTTGTTGCCGCGTCTGCGTGGCGTATTGCACACCCTGCCGTTGCCAGGCGTGGGTTTCTGCGTGGCAGCGCTGGCGATTACCGGCGTGCCGCCGTTCAACGGCTTCTTCAGTAAATTCCCGCTGTTTGCTGCCGGTTTTGCGTTGTCAGTGGAGTACTGGATCCTGCTGCCCGCCATGATTCTTCTGATGATTGAATCGGTCGCCAGTTTCGCCTGGTTTATTCGCTGGTTTGGTCGCGTTGTGCCTGGCAAACCGAGCGAGGCCGTCGCCGATGCCGCACCGCTGCCAGGATCAATGCGCCTGGTGTTGATTGTACTGATTGTGATGTCGCTGATTTCCAGCGTAATCGCCGCGACCTGGTTGCAGTAA", 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], - [ - "gene_synonym", - "b2485" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEW1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008188" - ], - [ - "gene_synonym", - "GeneID:945298" - ], - [ - "gene_synonym", - "JW2470" - ], - [ - "gene_synonym", - "EcoGene:EG14213" - ], - [ - "gene_synonym", - "ECK2481" - ] - ], - "dna_sequence": "ATGACCGGTTCTATGATCGTAAATAATCTGGCGGGACTGATGATGCTGACATCGCTGTTTGTGATTAGCGTCAAAAGCTATCGCCTGTCATGCGGATTTTACGCCTGCCAGTCACTGGTGCTGGTGTCTATTTTCGCCACTCTCTCGTGCCTGTTCGCCGCAGAGCAACTGCTGATCTGGTCCGCCAGCGCCTTTATCACCAAAGTGCTGCTGGTACCGTTAATCATGACTTACGCTGCACGAAATATTCCCCAGAACATCCCGGAAAAAGCGTTATTCGGTCCGGCAATGATGGCACTGCTCGCGGCGTTAATTGTCCTGCTTTGCGCATTTGTCGTTCAGCCCGTGAAGCTACCGATGGCTACCGGGCTGAAACCGGCGCTGGCGGTAGCGTTAGGTCATTTTCTGCTTGGCCTGCTGTGCATTGTCAGCCAGCGCAATATCCTGCGGCAAATTTTTGGTTACTGCCTGATGGAAAACGGCTCCCATCTGGTGCTGGCGCTTCTTGCCTGGCGAGCACCGGAACTGGTGGAAATAGGTATCGCTACCGACGCCATCTTCGCCGTCATTGTGATGGTGTTACTGGCAAGAAAAATATGGCGTACCCACGGCACGCTGGACGTGAACAACTTGACCGCGCTGAAGGGATAA", - "dna_sequence_length": 651, - "functions": [ - "hydrogenase 4, membrane subunit" - ], - "id": "CDS_2467", - "location": [ - [ - "NC_000913", - 2606262, - "+", - 651 - ] - ], - "md5": "4da0d26e20342a23e7b67990730ce5e5", - "parent_gene": "", - "protein_md5": "e465515bd56e7c2862b9ad8e0ac8d7eb", - "protein_translation": "MTGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSIFATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLAALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMENGSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG", - "protein_translation_length": 216, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130411" - ], - [ - "gene_synonym", - "GeneID:946962" - ], - [ - "gene_synonym", - "hyfF" - ], - [ - "gene_synonym", - "NP_416981.1" - ], - [ - "gene_synonym", - "EcoGene:EG14214" - ], - [ - "gene_synonym", - "b2486" - ], - [ - "gene_synonym", - "JW2471" - ], - [ - "gene_synonym", - "ASAP:ABE-0008191" - ], - [ - "gene_synonym", - "ECK2482" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77437" - ] - ], - "dna_sequence": "ATGAGTTATTCTGTGATGTTCGCTTTACTCCTGCTCACGCCGCTGCTTTTTTCGCTGCTCTGTTTTGCCTGCCGGAAACGGAGACTTTCTGCGACTCGCACGGTGACCGTATTACATAGCTTAGGGATCACACTGCTGCTGATTCTGGCACTCTGGGTGGTCCAAACTGCCGCTGATGCAGGAGAAATATTCGCTGCGGGACTGTGGCTTCATATTGATGGTCTGGGCGGTTTGTTCCTCGCCATTCTTGGTGTGATTGGCTTTCTCACCGGTATTTACTCGATTGGCTACATGCGTCATGAAGTGGCACACGGCGAGCTTTCACCCGTTACGCTGTGCGATTACTACGGTTTCTTCCATCTGTTTTTGTTCACCATGCTGCTGGTTGTTACCAGCAATAACCTGATTGTGATGTGGGCGGCGATCGAAGCCACCACCTTAAGCTCGGCGTTTCTGGTAGGCATTTACGGTCAGCGTTCATCGCTGGAAGCTGCATGGAAGTACATCATTATTTGTACTGTTGGTGTCGCTTTTGGTCTGTTCGGTACCGTGCTGGTATACGCCAACGCCGCCAGCGTTATGCCGCAGGCAGAAATGGCGATATTCTGGAGCGAGGTTCTTAAGCAATCGTCCTTGCTTGACCCAACATTAATGCTGTTGGCCTTTGTGTTTTTGCTAATTGGCTTTGGTACCAAAACCGGGCTATTTCCCATGCACGCCTGGCTGCCGGATGCTCACAGTGAAGCGCCGAGTCCGGTCAGCGCCCTGCTCTCCGCCGTATTGCTGAACTGCGCGCTGTTGGTGCTGATTCGCTATTACATCATTATTTGCCAAGCCATCGGCAGCGATTTCCCCAACCGGTTGTTGCTCATCTTCGGCATGTTGTCGGTTGCCGTGGCGGCATTTTTCATTCTGGTACAGCGGGACATTAAGCGTCTGCTGGCGTACTCCAGCGTGGAGAACATGGGGCTGGTCGCGGTGGAGCTAGGCATTGGCGGGCCGCTGGGAATTTTTGCCGCGCTGCTGCACATCTTAAACCACAGTCTGGCAAAAACGCTGCTGTTCTGCGGTTCCGGCAATGTACTGCTCAAGTACGGCACGCGCGATCTCAACGTCGTCTGTGGGATGCTCAAAATCATGCCATTTACCGCCGTGCTGTTTGGCGGCGGTGCGCTGGCGCTGGCAGGGATGCCGCCCTTCAACATTTTTCTTAGCGAATTTATGACCATTACCGCCGGACTGGCACGTAATCACCTGCTGATTATCGTCCTGCTGTTATTGCTGTTAACGCTGGTGCTGGCGGGCCTGGTACGGATGGCTGCGCGGGTGTTAATGGCGAAACCGCCGCAGGCCGTTAACCGGGGTGATCTCGGCTGGTTGACCACCTCGCCAATGGTGATTCTGCTGGTCATGATGCTGGCGATGGGAACGCATATTCCACAACCTGTCATCAGGATCCTGGCGGGCGCTTCCACTATAGTCCTCTCAGGGACGCACGATCTGCCTGCACAACGTAGCACCTGGCATGATTTTTTGCCTTCAGGCACCGCATCTGTTTCGGAGAAACACAGTGAACGTTAA", - "dna_sequence_length": 1581, - "functions": [ - "hydrogenase 4, membrane subunit" - ], - "id": "CDS_2468", - "location": [ - [ - "NC_000913", - 2606917, - "+", - 1581 - ] - ], - "md5": "1a7b4f24225ddf4287c2ef763ab1d061", - "parent_gene": "", - "protein_md5": "102dcc6be16fab14349a02bb69d894b8", - "protein_translation": "MSYSVMFALLLLTPLLFSLLCFACRKRRLSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGIYSIGYMRHEVAHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFLLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVELGIGGPLGIFAALLHILNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTITAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQAVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTWHDFLPSGTASVSEKHSER", - "protein_translation_length": 526, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130412" - ], - [ - "gene_synonym", - "hyfG" - ], - [ - "gene_synonym", - "GeneID:946964" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77329" - ], - [ - "gene_synonym", - "b2487" - ], - [ - "gene_synonym", - "NP_416982.1" - ], - [ - "gene_synonym", - "JW2472" - ], - [ - "gene_synonym", - "EcoGene:EG14215" - ], - [ - "gene_synonym", - "ECK2483" - ], - [ - "gene_synonym", - "ASAP:ABE-0008194" - ] - ], - "dna_sequence": "GTGAACGTTAATTCATCGTCAAATCGTGGCGAAGCGATTCTCGCCGCCCTGAAAACGCAGTTCCCCGGCGCGGTGCTGGATGAAGAGCGACAAACGCCTGAACAGGTCACCATTACGGTGAAAATCAATCTGCTGCCTGACGTTGTACAGTATCTTTATTATCAACATGATGGCTGGCTTCCGGTCCTGTTTGGCAACGACGAGCGGACACTTAACGGTCATTACGCGGTTTATTATGCCCTTTCAATGGAAGGGGCCGAAAAATGCTGGATTGTGGTGAAGGCGCTGGTCGATGCCGACAGTCGGGAGTTTCCGTCAGTCACACCGCGCGTCCCTGCCGCGGTCTGGGGCGAGCGAGAAATTCGCGATATGTACGGGCTGATTCCGGTTGGCCTGCCGGATCAGCGTCGCCTGGTGTTGCCCGATGACTGGCCGGAAGATATGCATCCGCTGCGCAAAGATGCGATGGATTATCGACTGCGCCCTGAACCGACGACTGATTCCGAAACGTATCCGTTTATCAATGAGGGCAACAGCGATGCGCGGGTGATCCCTGTCGGCCCGCTGCATATCACCTCCGATGAACCGGGTCACTTCCGCTTGTTTGTGGATGGCGAGCAAATTGTCGATGCTGATTACCGCCTGTTTTATGTCCATCGCGGCATGGAGAAACTGGCAGAAACGCGGATGGGCTACAACGAAGTGACCTTCTTATCGGACCGCGTGTGTGGGATTTGCGGTTTTGCCCACAGTGTGGCCTATACCAATTCGGTTGAAAATGCACTGGGGATTGAGGTGCCGCAACGAGCACATACTATTCGCTCGATTCTGCTGGAAGTCGAACGGCTACACAGTCATTTGCTTAACCTTGGCCTCTCCTGCCATTTCGTTGGTTTTGATACCGGCTTTATGCAATTTTTCCGCGTGCGGGAAAAGTCGATGACGATGGCGGAATTGCTGATCGGGTCGCGTAAAACCTACGGTCTGAATCTGATTGGTGGTGTTCGCCGCGATATTCTCAAAGAGCAACGTCTGCAAACGCTGAAACTGGTGCGCGAGATGCGCGCCGACGTGTCGGAGCTGGTAGAGATGCTGCTTGCTACGCCGAATATGGAACAACGCACTCAGGGCATTGGCATTCTCGACCGACAAATCGCCCGTGATTTGCGCTTTGATCACCCCTACGCCGACTACGGCAATATTCCAAAAACACTGTTTACCTTTACCGGCGGCGATGTTTTCTCCCGCGTGATGGTCCGTGTCAAAGAGACGTTTGATTCGCTGGCAATGCTGGAATTTGCCCTCGACAACATGCCGGATACCCCACTGCTGACCGAAGGCTTTAGCTATAAACCTCACGCATTCGCGCTGGGCTTTGTTGAAGCGCCACGCGGTGAAGACGTGCACTGGAGCATGCTCGGTGATAACCAAAAATTGTTCCGCTGGCGCTGCCGTGCCGCCACCTACGCCAACTGGCCGGTGTTGCGTTACATGCTGCGCGGCAATACCGTTTCTGACGCACCGCTGATTATCGGTAGCCTTGATCCCTGCTACTCCTGTACCGACCGTGTGACGCTGGTAGATGTGCGCAAGCGCCAGTCAAAAACCGTGCCGTATAAAGAGATCGAACGCTACGGCATTGATCGTAACCGTTCGCCGCTGAAGTAA", - "dna_sequence_length": 1668, - "functions": [ - "hydrogenase 4, subunit" - ], - "id": "CDS_2469", - "location": [ - [ - "NC_000913", - 2608487, - "+", - 1668 - ] - ], - "md5": "4106085a90f0a7078c19ea941b384bad", - "parent_gene": "", - "protein_md5": "12df15a8d2c83c5a7ead213a8dda3362", - "protein_translation": "MNVNSSSNRGEAILAALKTQFPGAVLDEERQTPEQVTITVKINLLPDVVQYLYYQHDGWLPVLFGNDERTLNGHYAVYYALSMEGAEKCWIVVKALVDADSREFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWPEDMHPLRKDAMDYRLRPEPTTDSETYPFINEGNSDARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLIGSRKTYGLNLIGGVRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQIARDLRFDHPYADYGNIPKTLFTFTGGDVFSRVMVRVKETFDSLAMLEFALDNMPDTPLLTEGFSYKPHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRAATYANWPVLRYMLRGNTVSDAPLIIGSLDPCYSCTDRVTLVDVRKRQSKTVPYKEIERYGIDRNRSPLK", - "protein_translation_length": 555, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130413" - ], - [ - "gene_synonym", - "hyfH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77423" - ], - [ - "gene_synonym", - "ASAP:ABE-0008196" - ], - [ - "gene_synonym", - "GeneID:946965" - ], - [ - "gene_synonym", - "ECK2484" - ], - [ - "gene_synonym", - "JW2473" - ], - [ - "gene_synonym", - "NP_416983.1" - ], - [ - "gene_synonym", - "b2488" - ], - [ - "gene_synonym", - "EcoGene:EG14216" - ] - ], - "dna_sequence": "ATGCTGAAGTTACTGAAAACTATTATGCGCGCCGGAACCGCGACGGTGAAATATCCCTTCGCGCCACTGGAGGTCAGCCCTGGCTTTCGCGGAAAACCGGACCTGATGCCCAGCCAATGTATTGCCTGCGGTGCCTGCGCCTGTGCTTGTCCGGCAAATGCGCTGACTATCCAGACCGACGACCAGCAAAATTCGCGCACCTGGCAGCTCTATCTGGGGCGTTGTATTTACTGCGGACGTTGTGAAGAAGTGTGCCCGACCAGAGCCATCCAGCTTACCAATAACTTTGAACTGACCGTCACCAATAAAGCCGATCTCTATACCCGCGCGACGTTCCATCTACAACGTTGCAGCCGTTGCGAACGCCCGTTTGCCCCGCAAAAAACCATCGCACTGGCTGCTGAATTGTTAGCACAGCAACAAAATGCGCCACAAAACCGCGAAATGTTGTGGGCGCAAGCGAGCGTCTGCCCGGAATGCAAACAACGCGCGACGCTGATCAACGACGATACAGATGTACTGCTGGTGGCTAAGGAGCAGCTATGA", - "dna_sequence_length": 546, - "functions": [ - "hydrogenase 4, Fe-S subunit" - ], - "id": "CDS_2470", - "location": [ - [ - "NC_000913", - 2610164, - "+", - 546 - ] - ], - "md5": "84c5f02c50c3879285a130e504855e0a", - "parent_gene": "", - "protein_md5": "d8a3e3ff10107f51865e21b469fca63d", - "protein_translation": "MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACGACACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKADLYTRATFHLQRCSRCERPFAPQKTIALAAELLAQQQNAPQNREMLWAQASVCPECKQRATLINDDTDVLLVAKEQL", - "protein_translation_length": 181, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5805" - ], - [ - "gene_synonym", - "hyfI" - ], - [ - "gene_synonym", - "GI:16130414" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77668" - ], - [ - "gene_synonym", - "NP_416984.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008198" - ], - [ - "gene_synonym", - "GeneID:946966" - ], - [ - "gene_synonym", - "ECK2485" - ], - [ - "gene_synonym", - "b2489" - ], - [ - "gene_synonym", - "EcoGene:EG14217" - ] - ], - "dna_sequence": "ATGAGTCCAGTGCTTACACAACATGTCAGCCAGCCCATCACGCTGGACGAGCAAACGCAAAAGATGAAGCGGCATTTGCTACAGGATATCCGTCGCTCGGCTTACGTTTATCGCGTCGATTGCGGCGGCTGCAACGCCTGTGAAATCGAAATTTTTGCTGCCATTACACCAGTATTCGACGCAGAACGTTTTGGCATTAAGGTTGTTTCATCACCGCGTCACGCCGATATTTTGTTATTTACTGGCGCAGTCACCCGGGCGATGCGTATGCCTGCACTTCGGGCGTATGAGTCTGCCCCCGATCATAAAATTTGTGTTTCCTACGGCGCGTGCGGTGTCGGCGGCGGTATTTTCCACGATCTCTACAGCGTCTGGGGCGGTAGCGACACCATTGTCCCCATTGATGTTTGGATCCCCGGCTGCCCGCCAACACCGGCCGCCACCATTCACGGTTTCGCCGTGGCGCTCGGTTTGCTGCAACAGAAGATTCACGCTGTGGATTATCGCGATCCCACCGGGGTGACTATGCAACCGTTGTGGCCGCAGATCCCGCCATCACAGCGTATCGCCATTGAGCGAGAAGCGCGGCGGCTGGCGGGCTATCGTCAGGGGCGAGAAATTTGCGATCGGCTCCTGCGCCATTTAAGCGACGATCCTACAGGAAATCGGGTTAACACCTGGTTGCGCGATGCCGACGATCCACGTCTCAATAGTATCGTTCAGCAACTCTTTCGCGTACTCCGGGGGTTACATGACTGA", - "dna_sequence_length": 759, - "functions": [ - "hydrogenase 4, Fe-S subunit" - ], - "id": "CDS_2471", - "location": [ - [ - "NC_000913", - 2610706, - "+", - 759 - ] - ], - "md5": "73083f8c6a5eb2f4117f5f27c4edc362", - "parent_gene": "", - "protein_md5": "585e5fe656e2a7637d40475c5e625221", - "protein_translation": "MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGCNACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDHKICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQQKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDDPTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD", - "protein_translation_length": 252, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hyfJ" - ], - [ - "gene_synonym", - "GeneID:947713" - ], - [ - "gene_synonym", - "GI:90111446" - ], - [ - "gene_synonym", - "NP_416985.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0008200" - ], - [ - "gene_synonym", - "EcoGene:EG14218" - ], - [ - "gene_synonym", - "b2490" - ], - [ - "gene_synonym", - "ECK2486" - ], - [ - "gene_synonym", - "JW2475" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77453" - ] - ], - "dna_sequence": "ATGACTGAAGAGTGCGGGGAAATTGTTTTCTGGACGCTGCGAAAAAAGTTTGTCGCCAGTAGCGACGAGATGCCGGAACACAGCTCTCAGGTAATGTATTACTCGCTAGCTATCGGCCATCACGTTGGCGTGATTGATTGTCTGAATGTCGCCTTCCGCTGCCCACTGACGGAATACGAAGATTGGCTTGCACTGGTCGAAGAGGAGCAAGCCCGACGTAAGATGCTGGGGGTGATGACTTTTGGTGAGATTGTTATTGACGCCAGCCACACCGCCCTGTTGACCCGGGCATTCGCGCCACTGGCGGATGACGCGACGTCTGTGTGGCAGGCGCGTAGCATTCAATTCATTCATCTGTTGGATGAAATTGTGCAGGAACCGGCCATCTATCTGATGGCCAGAAAAATTGCGTGA", - "dna_sequence_length": 414, - "functions": [ - "putative processing element hydrogenase 4" - ], - "id": "CDS_2472", - "location": [ - [ - "NC_000913", - 2611457, - "+", - 414 - ] - ], - "md5": "58d4e0841ff73d8e0e1c9ab0f70903af", - "parent_gene": "", - "protein_md5": "089b02b48f3fa3909d3585ecae01c91f", - "protein_translation": "MTEECGEIVFWTLRKKFVASSDEMPEHSSQVMYYSLAIGHHVGVIDCLNVAFRCPLTEYEDWLALVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFAPLADDATSVWQARSIQFIHLLDEIVQEPAIYLMARKIA", - "protein_translation_length": 137, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111447" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P71229" - ], - [ - "gene_synonym", - "ASAP:ABE-0008204" - ], - [ - "gene_synonym", - "b2491" - ], - [ - "gene_synonym", - "EcoGene:EG14219" - ], - [ - "gene_synonym", - "ECK2487" - ], - [ - "gene_synonym", - "NP_416986.4" - ], - [ - "gene_synonym", - "hyfR" - ], - [ - "gene_synonym", - "GeneID:948886" - ], - [ - "gene_synonym", - "JW2476" - ] - ], - "dna_sequence": "ATGGCTATGTCAGACGAGGCGATGTTTGCCCCGCCACAAGGAATAACAATTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGATGTGACGGCAACAACAGAGTATCAGGGCGAGATGGTCGATTATTCGCGTCACGCCGTCCTTCTCGGCAGTAGTGGAATGGCGGAGCTACGCTTTATTCGCACCCACGGCAGTCGTTTTACTTCCCAGGATTGCACACTGTTTAACTGGCTGGCGCGGATAATCACCCCGGTTCTGCAATCATGGCTCAATGATGAAGAACAGCAGGTGGCGCTGCGTTTGCTGGAGAAAGATCGCGATCATCATCGGGTACTGGTTGATATTACTAATGCAGTGCTGTCACATCTTGATCTCGACGATCTGATCGCTGACGTCGCTCGTGAGATCCATCATTTTTTCGGTCTGGCTTCAGTCAGTATGGTACTGGGCGATCATCGAAAGAACGAGAAGTTCAGCCTGTGGTGCAGCGATCTTTCTGCCTCACATTGTGCGTGTCTGCCACGCTGTATGCCTGGCGAAAGTGTATTGCTGACACAAACGCTACAAACCCGACAACCGACCTTGACGCACCGTGCAGATGATCTGTTTCTCTGGCAACGCGACCCGTTATTACTCTTACTTGCATCTAACGGCTGCGAATCTGCGCTCCTTATACCGCTTACCTTTGGCAACCATACACCGGGTGCATTGTTGCTGGCGCATACCTCTTCCACTCTCTTTAGTGAGGAAAACTGCCAGCTACTACAACACATAGCCGATCGCATCGCTATTGCCGTTGGCAATGCCGATGCCTGGCGTAGCATGACCGATTTGCAGGAAAGTTTGCAGCAAGAAAACCACCAGCTTAGCGAGCAGCTCCTTTCGAATCTGGGCATCGGTGACATTATCTATCAAAGCCAGGCAATGGAAGACCTGCTCCAGCAGGTAGATATTGTGGCGAAGAGCGACAGTACGGTGTTGATTTGTGGTGAAACCGGAACTGGCAAAGAGGTGATCGCCAGAGCGATCCATCAACTTAGCCCGCGACGCGACAAGCCGCTGGTCAAAATCAACTGCGCTGCCATCCCCGCCAGTCTTCTGGAAAGTGAGTTATTCGGTCATGACAAAGGGGCGTTTACTGGTGCGATTAATACCCATCGTGGTCGTTTTGAAATTGCCGATGGCGGCACGTTGTTTCTCGATGAAATTGGCGATCTGCCGTTAGAACTTCAGCCTAAACTGCTGCGCGTATTGCAGGAGCGGGAGATTGAGCGTCTCGGCGGGAGTAGAACGATCCCGGTGAATGTCAGAGTCATTGCCGCCACCAACCGTGATTTGTGGCAAATGGTTGAAGATCGCCAGTTTCGCAGCGATCTCTTTTATCGCCTGAATGTCTTCCCACTGGAATTGCCGCCGCTACGCGACCGTCCGGAAGATATCCCTCTTTTAGCAAAACATTTCACGCAAAAAATGGCGCGCCATATGAATCGCGCAATTGACGCCATCCCGACCGAGGCACTACGCCAGTTGATGTCGTGGGATTGGCCGGGCAACGTGCGCGAGCTGGAAAACGTGATTGAGCGGGCGGTACTGTTGACTCGTGGTAACAGTCTGAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTTACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGCCGGGCCCCGTGGCGCAGCGACGCGATTAGGGATGAAGCGCACCACGCTGCTGTCACGAATGCAGCGGCTGGGGATCTCGGTTCGCGAGGTGTTGTAA", - "dna_sequence_length": 2013, - "functions": [ - "hydrogenase-4 transcriptional activator" - ], - "id": "CDS_2473", - "location": [ - [ - "NC_000913", - 2611900, - "+", - 2013 - ] - ], - "md5": "4edbb08cc522144b4d3de164834c5cb9", - "parent_gene": "", - "protein_md5": "64c36310818379acae763dab37527c29", - "protein_translation": "MAMSDEAMFAPPQGITIEAVNGMLAERLAQKHGKASLLRAFIPLPPPFSPVQLIELHVLKSNFYYRYHDDGSDVTATTEYQGEMVDYSRHAVLLGSSGMAELRFIRTHGSRFTSQDCTLFNWLARIITPVLQSWLNDEEQQVALRLLEKDRDHHRVLVDITNAVLSHLDLDDLIADVAREIHHFFGLASVSMVLGDHRKNEKFSLWCSDLSASHCACLPRCMPGESVLLTQTLQTRQPTLTHRADDLFLWQRDPLLLLLASNGCESALLIPLTFGNHTPGALLLAHTSSTLFSEENCQLLQHIADRIAIAVGNADAWRSMTDLQESLQQENHQLSEQLLSNLGIGDIIYQSQAMEDLLQQVDIVAKSDSTVLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAAIPASLLESELFGHDKGAFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQPKLLRVLQEREIERLGGSRTIPVNVRVIAATNRDLWQMVEDRQFRSDLFYRLNVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRAIDAIPTEALRQLMSWDWPGNVRELENVIERAVLLTRGNSLNLHLNVRQSRLLPTLNEDSALRSSMAQLLHPTTPENDEEERQRIVQVLRETNGIVAGPRGAATRLGMKRTTLLSRMQRLGISVREVL", - "protein_translation_length": 670, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130417" - ], - [ - "gene_synonym", - "ASAP:ABE-0008206" - ], - [ - "gene_synonym", - "GeneID:949032" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77733" - ], - [ - "gene_synonym", - "NP_416987.1" - ], - [ - "gene_synonym", - "b2492" - ], - [ - "gene_synonym", - "ECK2488" - ], - [ - "gene_synonym", - "focB" - ], - [ - "gene_synonym", - "EcoGene:EG14220" - ], - [ - "gene_synonym", - "JW2477" - ] - ], - "dna_sequence": "ATGAGAAACAAACTCTCTTTCGACTTGCAGTTGAGCGCCAGAAAAGCGGCAATCGCTGAACGGATTGCCGCCCATAAAATTGCCCGCAGTAAAGTGTCGGTCTTTTTAATGGCGATGTCCGCTGGCGTGTTTATGGCGATCGGATTTACTTTTTACCTTTCCGTTATCGCCGATGCCCCGTCTTCACAGGCATTAACCCATCTGGTGGGCGGCCTTTGCTTTACACTCGGCTTTATTTTGCTGGCGGTTTGCGGCACCAGCCTGTTCACCTCGTCGGTAATGACGGTGATGGCAAAAAGTCGGGGCGTTATTAGTTGGCGAACTTGGCTGATTAACGCACTTCTGGTGGCCTGCGGTAATCTGGCAGGTATTGCCTGTTTCAGTTTGTTAATCTGGTTTTCCGGGCTGGTGATGAGTGAAAACGCGATGTGGGGAGTCGCGGTTTTACACTGCGCCGAGGGCAAAATGCATCATACATTTACTGAATCTGTCAGCCTCGGCATTATGTGCAATCTGATGGTTTGCCTGGCGCTGTGGATGAGTTATTGCGGGCGTTCGTTATGCGACAAAATCGTCGCCATGATTTTGCCCATCACCCTGTTTGTCGCCAGTGGCTTTGAGCACTGTATCGCCAATTTGTTTGTGATTCCGTTCGCCATTGCCATTCGCCATTTCGCCCCTCCCCCCTTCTGGCAGCTGGCGCACAGTAGCGCAGACAATTTTCCGGCACTGACGGTCAGCCATTTTATTACCGCCAATCTGCTCCCGGTGATGCTGGGTAATATTATCGGCGGTGCGGTGCTGGTGAGTATGTGTTATCGGGCTATTTATTTACGTCAGGAACCCTGA", - "dna_sequence_length": 849, - "functions": [ - "putative formate transporter" - ], - "id": "CDS_2474", - "location": [ - [ - "NC_000913", - 2613934, - "+", - 849 - ] - ], - "md5": "f896b50f8a0a40407f303363f8c0dfda", - "parent_gene": "", - "protein_md5": "80e7febfcb2f4cd46680d6c9ef49e6a9", - "protein_translation": "MRNKLSFDLQLSARKAAIAERIAAHKIARSKVSVFLMAMSAGVFMAIGFTFYLSVIADAPSSQALTHLVGGLCFTLGFILLAVCGTSLFTSSVMTVMAKSRGVISWRTWLINALLVACGNLAGIACFSLLIWFSGLVMSENAMWGVAVLHCAEGKMHHTFTESVSLGIMCNLMVCLALWMSYCGRSLCDKIVAMILPITLFVASGFEHCIANLFVIPFAIAIRHFAPPPFWQLAHSSADNFPALTVSHFITANLLPVMLGNIIGGAVLVSMCYRAIYLRQEP", - "protein_translation_length": 282, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130418" - ], - [ - "gene_synonym", - "GeneID:945894" - ], - [ - "gene_synonym", - "ASAP:ABE-0008208" - ], - [ - "gene_synonym", - "yfgO" - ], - [ - "gene_synonym", - "perM" - ], - [ - "gene_synonym", - "JW2478" - ], - [ - "gene_synonym", - "NP_416988.1" - ], - [ - "gene_synonym", - "b2493" - ], - [ - "gene_synonym", - "ECK2489" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFI9" - ], - [ - "gene_synonym", - "EcoGene:EG14221" - ] - ], - "dna_sequence": "ATGCTCGAAATGTTGATGCAATGGTATCGCCGCCGTTTTAGCGACCCGGAAGCGATTGCCTTGCTGGTTATTTTAGTTGCCGGATTTGGCATTATCTTTTTCTTTAGTGGCCTGCTTGCTCCGTTGCTGGTGGCTATTGTGCTGGCCTATTTGCTGGAATGGCCAACCGTGCGTCTGCAATCTATTGGCTGCTCCCGCCGCTGGGCGACGTCGATTGTATTGGTGGTTTTCGTCGGTATATTGCTACTGATGGCGTTCGTGGTACTGCCTATCGCCTGGCAACAGGGCATCTACTTAATCCGCGATATGCCGGGGATGCTCAATAAGCTTTCTGACTTTGCCGCCACGTTGCCGCGCCGCTATCCGGCGTTAATGGACGCGGGCATTATTGATGCAATGGCCGAAAATATGCGCAGTCGGATGCTGACCATGGGCGATTCGGTGGTGAAAATTTCCCTCGCCTCGCTGGTCGGTTTGCTGACCATAGCCGTCTATCTGGTGCTGGTGCCATTGATGGTCTTCTTCCTGCTGAAAGACAAAGAGCAGATGCTGAACGCCGTTCGCCGGGTGCTGCCGCGTAACCGTGGGCTGGCAGGACAGGTGTGGAAGGAGATGAATCAACAAATCACCAACTATATCCGCGGCAAAGTGCTGGAGATGATCGTGGTGGGGATCGCCACCTGGCTGGGGTTCTTGCTCTTCGGGCTGAACTATTCGCTGCTGCTGGCAGTGCTGGTCGGCTTCTCGGTTCTTATTCCGTACATTGGCGCATTTGTGGTGACCATTCCGGTGGTTGGCGTGGCGCTATTCCAGTTTGGCGCAGGTACTGAATTCTGGAGCTGCTTCGCGGTGTATCTGATTATTCAGGCGCTGGACGGCAACCTGTTAGTGCCGGTGTTGTTCTCCGAAGCGGTTAACCTGCATCCGCTGGTGATTATTTTATCGGTGGTGATCTTCGGTGGTTTGTGGGGATTCTGGGGCGTATTCTTCGCCATTCCGTTGGCGACGCTGATCAAAGCCGTGATTCATGCCTGGCCCGATGGGCAAATCGCGCAAGAATAA", - "dna_sequence_length": 1062, - "functions": [ - "putative UPF0118 family inner membrane permease" - ], - "id": "CDS_2475", - "location": [ - [ - "NC_000913", - 2615881, - "-", - 1062 - ] - ], - "md5": "52d0970bcf5c4b8707f4b9451caec9a5", - "parent_gene": "", - "protein_md5": "06bbef67f05e6a9bce12f6fea70defe0", - "protein_translation": "MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLVAIVLAYLLEWPTVRLQSIGCSRRWATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRSRMLTMGDSVVKISLASLVGLLTIAVYLVLVPLMVFFLLKDKEQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVIHAWPDGQIAQE", - "protein_translation_length": 353, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfgC" - ], - [ - "gene_synonym", - "GI:16130419" - ], - [ - "gene_synonym", - "bepA" - ], - [ - "gene_synonym", - "ECK2490" - ], - [ - "gene_synonym", - "b2494" - ], - [ - "gene_synonym", - "ASAP:ABE-0008212" - ], - [ - "gene_synonym", - "GeneID:947029" - ], - [ - "gene_synonym", - "NP_416989.1" - ], - [ - "gene_synonym", - "EcoGene:EG14199" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P66948" - ], - [ - "gene_synonym", - "JW2479" - ] - ], - "dna_sequence": "ATGTTCAGGCAGTTGAAAAAAAACCTGGTTGCAACCCTCATTGCTGCTATGACCATTGGTCAGGTAGCCCCGGCGTTTGCCGACAGCGCAGACACCTTGCCGGATATGGGAACCTCCGCAGGAAGCACGCTTTCCATTGGTCAGGAAATGCAGATGGGCGACTATTATGTCCGCCAGCTACGCGGCAGCGCGCCGTTAATTAATGACCCGCTGTTAACGCAATATATTAATTCGCTGGGGATGCGTCTGGTTTCGCATGCCAATTCGGTTAAGACACCGTTTCATTTTTTTCTGATCAACAACGACGAAATTAACGCCTTTGCTTTCTTTGGCGGCAACGTGGTGCTGCACTCTGCCCTGTTCCGTTATTCCGATAACGAAAGTCAACTGGCTTCAGTTATGGCGCACGAAATCTCCCACGTCACCCAACGTCACCTGGCGCGAGCGATGGAAGATCAGCAGCGCAGCGCGCCGCTGACCTGGGTCGGCGCGTTAGGTTCTATTTTACTGGCGATGGCCAGTCCGCAGGCGGGGATGGCGGCGCTGACCGGTACACTGGCGGGAACGCGTCAGGGGATGATCAGTTTCACCCAGCAAAATGAACAGGAAGCGGACCGCATTGGTATTCAGGTGCTGCAACGCTCGGGATTCGATCCGCAGGCGATGCCAACCTTCCTCGAAAAATTACTCGATCAGGCGCGTTACTCCTCGCGCCCGCCGGAAATTTTATTGACTCACCCGTTGCCGGAAAGTCGTCTGGCAGATGCCCGCAACCGTGCTAATCAGATGCGCCCGATGGTGGTGCAGTCGTCGGAAGATTTCTATCTGGCGAAAGCGCGCACACTGGGGATGTATAATTCCGGACGTAACCAGCTCACCAGTGATTTGCTGGATGAATGGGCGAAAGGAAACGTTCGTCAGCAACGAGCAGCACAATATGGTCGTGCTTTACAGGCGATGGAAGCCAATAAATACGACGAGGCGCGTAAAACGCTGCAACCGTTACTGGCGGCAGAACCTGGCAACGCATGGTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAGCTGGCTGCGCGAGCAGAAGGTTATGCGCTCGCCGGACGACTCGATCAGGCCATTTCGCTGTTGAGTAGCGCCAGTTCGCAGGTGAAATTAGGCAGCCTGCAACAAGCGCGTTACGATGCGCGCATCGACCAGTTGCGCCAGCTGCAGGAACGCTTTAAGCCTTATACCAAGATGTAA", - "dna_sequence_length": 1464, - "functions": [ - "OM protein maintenance and assembly metalloprotease and chaperone, periplasmic" - ], - "id": "CDS_2476", - "location": [ - [ - "NC_000913", - 2616094, - "+", - 1464 - ] - ], - "md5": "1800c49e6dcbaf9c85971365516e7945", - "parent_gene": "", - "protein_md5": "ff6960d0cb988b94c8053c5b568dbb89", - "protein_translation": "MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINNDEINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHVTQRHLARAMEDQQRSAPLTWVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYLAKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQPLLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQPQEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM", - "protein_translation_length": 487, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfgD" - ], - [ - "gene_synonym", - "JW2480" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76569" - ], - [ - "gene_synonym", - "GeneID:946974" - ], - [ - "gene_synonym", - "ECK2491" - ], - [ - "gene_synonym", - "b2495" - ], - [ - "gene_synonym", - "ASAP:ABE-0008214" - ], - [ - "gene_synonym", - "EcoGene:EG14200" - ], - [ - "gene_synonym", - "GI:16130420" - ], - [ - "gene_synonym", - "NP_416990.1" - ] - ], - "dna_sequence": "ATGACCAAACAGGTAAAAATCTACCATAACCCACGCTGTTCAAAGAGCCGGGAAACGCTGAACCTGCTGAAAGAAAACGGCGTGGAGCCAGAAGTGGTGCTCTACCTTGAGACACCCGCCGATGCGGCAACGCTGCGCGATTTGCTGAAAATACTGGGGATGAATAGCGCCCGTGAATTGATGCGCCAGAAAGAGGATCTTTATAAAGAACTGAACCTGGCTGACAGTTCGCTTAGCGAAGAGGCGCTGATTCAGGCAATGGTGGATAATCCGAAGCTGATGGAGCGCCCGATTGTGGTCGCGAATGGCAAAGCGCGGATTGGTCGTCCACCGGAGCAGGTACTGGAAATCGTGGGTTAA", - "dna_sequence_length": 360, - "functions": [ - "putative oxidoreductase" - ], - "id": "CDS_2477", - "location": [ - [ - "NC_000913", - 2617578, - "+", - 360 - ] - ], - "md5": "3da554c3ccee2ef5d78d6c64f5f14ee7", - "parent_gene": "", - "protein_md5": "e3af5bbecb62cf2994c9eb79c05c4ac9", - "protein_translation": "MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKILGMNSARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVANGKARIGRPPEQVLEIVG", - "protein_translation_length": 119, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfgE" - ], - [ - "gene_synonym", - "ASAP:ABE-0008217" - ], - [ - "gene_synonym", - "JW5397" - ], - [ - "gene_synonym", - "GeneID:946977" - ], - [ - "gene_synonym", - "b2496" - ], - [ - "gene_synonym", - "idaB" - ], - [ - "gene_synonym", - "ECK2492" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69931" - ], - [ - "gene_synonym", - "hda" - ], - [ - "gene_synonym", - "EcoGene:EG14201" - ], - [ - "gene_synonym", - "GI:226524737" - ], - [ - "gene_synonym", - "NP_416991.2" - ] - ], - "dna_sequence": "CTGAACACACCGGCACAGCTCTCTTTGCCACTTTATCTTCCTGACGACGAAACCTTTGCAAGTTTCTGGCCGGGGGATAACTCCTCTTTACTGGCCGCGCTGCAAAACGTGCTGCGTCAGGAACATAGCGGTTACATCTATCTCTGGGCACGCGAAGGCGCGGGGCGCAGCCATCTGCTGCACGCGGCTTGCGCGGAATTGTCGCAGCGTGGCGATGCGGTGGGCTATGTCCCGCTGGATAAACGCACCTGGTTTGTTCCGGAAGTGCTCGACGGTATGGAGCATTTGTCGCTGGTCTGTATCGACAACATTGAGTGTATTGCAGGCGATGAGTTGTGGGAGATGGCGATTTTCGATCTCTACAATCGAATTCTGGAATCGGGCAAAACACGGTTGTTGATCACCGGCGATCGTCCACCGCGGCAGTTGAATCTGGGATTACCGGATCTCGCGTCGCGACTCGACTGGGGGCAGATCTACAAATTGCAGCCACTTTCTGATGAAGATAAGTTGCAGGCGCTACAGTTACGCGCGCGTTTGCGTGGTTTTGAACTGCCGGAAGATGTGGGGCGTTTCTTGCTGAAGCGGCTCGACAGAGAAATGCGCACGCTATTTATGACGTTGGATCAGTTGGATCGTGCGTCGATTACCGCGCAACGTAAGCTGACCATTCCGTTTGTGAAAGAAATTCTGAAGTTGTAG", - "dna_sequence_length": 702, - "functions": [ - "ATPase regulatory factor involved in DnaA inactivation" - ], - "id": "CDS_2478", - "location": [ - [ - "NC_000913", - 2618776, - "-", - 702 - ] - ], - "md5": "3e23d21deadc0e7e5b29342b6db7a68a", - "parent_gene": "", - "protein_md5": "ec1a7276a13f1f8c0caa0ce12a240087", - "protein_translation": "MNTPAQLSLPLYLPDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRTLFMTLDQLDRASITAQRKLTIPFVKEILKL", - "protein_translation_length": 233, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946978" - ], - [ - "gene_synonym", - "ASAP:ABE-0008219" - ], - [ - "gene_synonym", - "JW2482" - ], - [ - "gene_synonym", - "EcoGene:EG12129" - ], - [ - "gene_synonym", - "NP_416992.1" - ], - [ - "gene_synonym", - "b2497" - ], - [ - "gene_synonym", - "ECK2493" - ], - [ - "gene_synonym", - "uraA" - ], - [ - "gene_synonym", - "GI:16130422" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGM7" - ] - ], - "dna_sequence": "ATGACGCGCCGTGCTATCGGGGTGAGTGAAAGACCGCCACTTTTACAGACAATCCCGCTTAGTTTGCAACATTTGTTCGCCATGTTTGGTGCAACCGTCCTGGTGCCCGTCTTATTTCATATTAACCCGGCGACTGTACTGTTATTTAACGGTATTGGAACGCTGCTGTATCTCTTCATCTGTAAAGGGAAAATTCCGGCTTATCTTGGTTCCAGCTTTGCCTTTATTTCACCGGTATTGTTACTGTTGCCGTTAGGGTATGAAGTCGCGCTGGGCGGCTTTATTATGTGCGGCGTGCTGTTCTGCCTGGTTTCTTTTATCGTGAAGAAAGCGGGGACCGGCTGGCTGGACGTGCTGTTTCCACCTGCGGCAATGGGCGCAATCGTTGCCGTCATCGGTCTGGAGCTGGCGGGCGTAGCTGCCGGTATGGCGGGTTTACTCCCGGCTGAAGGGCAAACGCCAGACTCCAAAACCATCATCATCTCTATTACCACCCTGGCGGTCACGGTTTTAGGTTCCGTGCTGTTTCGTGGTTTCCTGGCAATTATCCCGATTTTAATTGGCGTGCTGGTGGGGTACGCGCTCTCTTTCGCAATGGGAATTGTCGATACCACGCCGATTATTAATGCTCACTGGTTTGCGCTGCCAACCCTCTATACGCCGCGCTTCGAGTGGTTTGCCATTCTGACTATTCTGCCAGCGGCGTTAGTGGTTATTGCCGAACACGTAGGGCACCTGGTAGTAACGGCTAATATCGTCAAAAAAGATCTGCTGCGCGATCCAGGTCTGCACCGTTCGATGTTTGCTAATGGCTTGTCGACCGTGATTTCCGGCTTCTTTGGCTCTACGCCAAATACTACTTACGGAGAAAACATTGGCGTGATGGCGATCACCCGTGTTTACAGTACCTGGGTTATCGGCGGGGCGGCGATTTTCGCTATCCTGCTTTCCTGCGTCGGTAAACTGGCTGCCGCTATCCAGATGATCCCATTGCCGGTGATGGGCGGCGTTTCGCTGCTGCTTTATGGTGTCATCGGTGCTTCCGGTATTCGTGTTTTGATCGAATCGAAAGTGGATTACAACAAAGCACAGAACCTGATCCTGACTTCCGTGATTTTGATCATCGGCGTCAGTGGCGCGAAGGTAAACATCGGCGCGGCGGAGTTAAAAGGTATGGCGCTGGCGACCATCGTCGGTATCGGCTTAAGTTTGATCTTCAAACTGATCAGTGTGCTGCGCCCTGAAGAAGTGGTGCTGGACGCAGAAGACGCGGATATAACAGACAAATAA", 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- "ASAP:ABE-0008224" - ], - [ - "gene_synonym", - "GI:90111448" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8F0" - ], - [ - "gene_synonym", - "upp" - ], - [ - "gene_synonym", - "EcoGene:EG11332" - ], - [ - "gene_synonym", - "b2498" - ], - [ - "gene_synonym", - "ECK2494" - ] - ], - "dna_sequence": "ATGAAGATCGTGGAAGTCAAACACCCACTCGTCAAACACAAGCTGGGACTGATGCGTGAGCAAGATATCAGCACCAAGCGCTTTCGCGAACTCGCTTCCGAAGTGGGTAGCCTGCTGACTTACGAAGCGACCGCCGACCTCGAAACGGAAAAAGTAACTATCGAAGGCTGGAACGGCCCGGTAGAAATCGACCAGATCAAAGGTAAGAAAATTACCGTTGTGCCAATTCTGCGTGCGGGTCTTGGTATGATGGACGGTGTGCTGGAAAACGTTCCGAGCGCGCGCATCAGCGTTGTCGGTATGTACCGTAATGAAGAAACGCTGGAGCCGGTACCGTACTTCCAGAAACTGGTTTCTAACATCGATGAGCGTATGGCGCTGATCGTTGACCCAATGCTGGCAACCGGTGGTTCCGTTATCGCGACCATCGACCTGCTGAAAAAAGCGGGCTGCAGCAGCATCAAAGTTCTGGTGCTGGTAGCTGCGCCAGAAGGTATCGCTGCGCTGGAAAAAGCGCACCCGGACGTCGAACTGTATACCGCATCGATTGATCAGGGACTGAACGAGCACGGATACATTATTCCGGGCCTCGGCGATGCCGGTGACAAAATCTTTGGTACGAAATAA", - "dna_sequence_length": 627, - "functions": [ - "uracil phosphoribosyltransferase" - ], - "id": "CDS_2480", - "location": [ - [ - "NC_000913", - 2620872, - "-", - 627 - ] - ], - "md5": "533a30bf663d2c00cccc42586d833956", - "parent_gene": "", - "protein_md5": "03976b836c485a5ee89901e09d2fb723", - "protein_translation": "MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEATADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMYRNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLVAAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK", - "protein_translation_length": 208, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10798" - ], - [ - "gene_synonym", - "ASAP:ABE-0008230" - ], - [ - "gene_synonym", - "JW2484" - ], - [ - "gene_synonym", - "GeneID:946975" - ], - [ - "gene_synonym", - "NP_416994.1" - ], - [ - "gene_synonym", - "purG" - ], - [ - "gene_synonym", - "GI:16130424" - ], - [ - "gene_synonym", - "ECK2495" - ], - [ - "gene_synonym", - "purI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08178" - ], - [ - "gene_synonym", - "purM" - ], - [ - "gene_synonym", - "b2499" - ] - ], - "dna_sequence": "GTGACCGATAAAACCTCTCTTAGCTACAAAGATGCCGGTGTTGATATTGACGCGGGTAATGCTCTGGTTGGAAGAATCAAAGGCGTAGTGAAGAAAACGCGTCGTCCGGAAGTGATGGGCGGTCTGGGCGGCTTCGGTGCGCTGTGTGCATTGCCGCAAAAATATCGTGAACCCGTGCTGGTTTCTGGCACTGACGGCGTAGGTACCAAGCTGCGTCTGGCAATGGACTTAAAACGTCACGACACCATTGGTATTGATCTGGTCGCCATGTGCGTTAATGACCTGGTGGTGCAAGGTGCAGAGCCGCTGTTTTTCCTCGACTATTACGCAACCGGAAAACTGGATGTTGATACCGCTTCAGCGGTGATCAGCGGCATTGCGGAAGGTTGTCTGCAATCAGGCTGTTCACTGGTGGGTGGCGAAACGGCAGAAATGCCGGGGATGTATCACGGTGAGGATTACGATGTCGCGGGTTTCTGCGTTGGCGTGGTAGAAAAATCAGAAATCATCGACGGCTCTAAAGTCAGCGACGGCGATGTGCTGATTGCACTCGGTTCCAGCGGTCCACACTCGAACGGCTATTCGCTGGTGCGCAAAATTCTTGAAGTCAGCGGTTGTGATCCGCAAACCACCGAACTTGATGGTAAGCCATTAGCCGATCATCTGCTGGCACCGACCCGCATTTACGTGAAGTCAGTGCTGGAGTTGATTGAAAAGGTCGATGTGCATGCCATTGCGCACCTGACCGGCGGCGGCTTCTGGGAAAACATTCCGCGCGTATTGCCAGATAATACTCAGGCAGTGATTGATGAATCTTCCTGGCAGTGGCCGGAAGTGTTCAACTGGCTGCAAACGGCAGGTAACGTTGAGCACCATGAAATGTATCGCACCTTCAACTGCGGCGTCGGGATGATTATTGCCCTGCCTGCTCCGGAAGTGGACAAAGCCCTCGCCCTGCTCAATGCCAACGGTGAAAACGCGTGGAAAATCGGTATCATCAAAGCCTCTGATTCCGAACAACGCGTGGTTATCGAATAA", - "dna_sequence_length": 1038, - "functions": [ - "phosphoribosylaminoimidazole synthetase" - ], - "id": "CDS_2481", - "location": [ - [ - "NC_000913", - 2621197, - "+", - 1038 - ] - ], - "md5": "96d44f3c0e5da7edd7e7c0f6a2e85f12", - "parent_gene": "", - "protein_md5": "93909b12e76a5ec3be97a0582a422434", - "protein_translation": "MTDKTSLSYKDAGVDIDAGNALVGRIKGVVKKTRRPEVMGGLGGFGALCALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEPLFFLDYYATGKLDVDTASAVISGIAEGCLQSGCSLVGGETAEMPGMYHGEDYDVAGFCVGVVEKSEIIDGSKVSDGDVLIALGSSGPHSNGYSLVRKILEVSGCDPQTTELDGKPLADHLLAPTRIYVKSVLELIEKVDVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQWPEVFNWLQTAGNVEHHEMYRTFNCGVGMIIALPAPEVDKALALLNANGENAWKIGIIKASDSEQRVVIE", - "protein_translation_length": 345, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10799" - ], - [ - "gene_synonym", - "ASAP:ABE-0008232" - ], - [ - "gene_synonym", - "JW2485" - ], - [ - "gene_synonym", - "purN" - ], - [ - "gene_synonym", - "GeneID:946973" - ], - [ - "gene_synonym", - "ade" - ], - [ - "gene_synonym", - "b2500" - ], - [ - "gene_synonym", - "ECK2496" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08179" - ], - [ - "gene_synonym", - "NP_416995.1" - ], - [ - "gene_synonym", - "GI:16130425" - ] - ], - "dna_sequence": "ATGAATATTGTGGTGCTTATTTCCGGCAACGGAAGTAATTTACAGGCAATTATTGACGCCTGTAAAACCAACAAAATTAAAGGCACCGTACGGGCAGTTTTCAGCAATAAGGCCGACGCGTTCGGCCTTGAACGCGCCCGCCAGGCGGGTATTGCAACGCATACGCTCATCGCCAGCGCGTTTGACAGTCGTGAAGCCTATGACCGGGAGTTGATTCATGAAATCGACATGTACGCACCCGATGTGGTCGTGCTGGCTGGTTTTATGCGCATTCTCAGCCCGGCGTTTGTCTCCCACTATGCCGGGCGTTTGCTGAACATTCACCCTTCTCTGCTGCCGAAATATCCCGGATTACACACCCATCGTCAGGCGCTGGAAAATGGCGATGAAGAGCACGGTACATCGGTGCATTTCGTCACCGATGAACTGGACGGTGGCCCGGTTATTTTACAGGCGAAAGTCCCGGTATTTGCTGGTGATTCGGAAGATGACATCACCGCCCGCGTGCAAACCCAGGAACACGCCATTTATCCACTGGTGATTAGCTGGTTTGCCGATGGTCGTCTGAAAATGCACGAAAACGCCGCGTGGCTGGATGGTCAACGTCTGCCGCCGCAGGGCTACGCTGCCGACGAGTAA", - "dna_sequence_length": 639, - "functions": [ - "phosphoribosylglycinamide formyltransferase 1" - ], - "id": "CDS_2482", - "location": [ - [ - "NC_000913", - 2622234, - "+", - 639 - ] - ], - "md5": "55895388b32569a8488794bdcc3ab98f", - "parent_gene": "", - "protein_md5": "3e687d05b19d5cd4a374f92003ff6a79", - "protein_translation": "MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLDGQRLPPQGYAADE", - "protein_translation_length": 212, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416996.1" - ], - [ - "gene_synonym", - "ppk" - ], - [ - "gene_synonym", - "GeneID:946971" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7B1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008235" - ], - [ - "gene_synonym", - "JW2486" - ], - [ - "gene_synonym", - "EcoGene:EG11510" - ], - [ - "gene_synonym", - "b2501" - ], - [ - "gene_synonym", - "ECK2497" - ], - [ - "gene_synonym", - "GI:16130426" - ] - ], - "dna_sequence": "ATGGGTCAGGAAAAGCTATACATCGAAAAAGAGCTCAGTTGGTTATCGTTCAATGAACGCGTGCTTCAGGAAGCGGCGGACAAATCTAACCCGCTGATTGAAAGGATGCGTTTCCTGGGGATCTATTCCAATAACCTTGATGAGTTCTATAAAGTCCGCTTCGCTGAACTGAAGCGACGCATCATTATTAGCGAAGAACAAGGCTCCAACTCTCATTCCCGCCATTTACTGGGCAAAATTCAGTCCCGGGTGCTGAAAGCCGATCAGGAATTCGACGGCCTCTACAACGAGCTATTGCTGGAGATGGCGCGCAACCAGATCTTCCTGATTAATGAACGCCAGCTCTCCGTCAATCAACAAAACTGGCTGCGTCATTATTTTAAGCAGTATCTGCGTCAGCACATTACGCCGATTTTAATCAATCCTGACACTGACTTAGTGCAGTTCCTGAAAGATGATTACACCTATCTGGCGGTGGAAATTATCCGTGGCGATACCATCCGTTACGCGCTGCTGGAGATCCCATCAGATAAAGTGCCGCGCTTTGTGAATTTACCGCCAGAAGCGCCGCGTCGACGCAAGCCGATGATTCTTCTGGATAACATTCTGCGTTACTGCCTTGATGATATTTTCAAAGGCTTCTTTGATTATGACGCGCTGAATGCCTATTCAATGAAGATGACCCGCGATGCCGAATACGATTTAGTGCATGAGATGGAAGCCAGCCTGATGGAGTTGATGTCTTCCAGTCTCAAGCAGCGTTTAACTGCTGAGCCGGTGCGTTTTGTTTATCAGCGCGATATGCCCAATGCGCTGGTTGAAGTGTTACGCGAAAAACTGACTATTTCCCGCTACGACTCCATCGTCCCCGGCGGTCGTTATCATAATTTTAAAGACTTTATTAATTTCCCCAATGTCGGCAAAGCCAATCTGGTGAACAAACCACTGCCGCGTTTACGCCATATTTGGTTTGATAAAGCCCAGTTCCGCAATGGTTTTGATGCCATTCGCGAACGCGATGTGTTGCTCTATTATCCTTATCACACCTTTGAGCATGTGCTGGAACTGCTGCGTCAGGCTTCGTTCGACCCGAGCGTACTGGCGATTAAAATTAACATTTACCGCGTGGCGAAAGATTCACGCATCATCGACTCGATGATCCACGCCGCACATAACGGTAAGAAAGTCACCGTGGTGGTTGAGTTACAGGCGCGTTTCGACGAAGAAGCCAACATTCACTGGGCGAAGCGCCTGACCGAAGCAGGCGTGCACGTTATCTTCTCTGCGCCGGGGCTGAAAATTCACGCCAAACTGTTCCTGATTTCACGTAAAGAAAACGGTGAAGTGGTGCGTTATGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGCGGGTATTTAACTTTATTGAAAACCCATACCGTCCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAATGGTGGACCGCGAGATCGCCAACGCGCAGCAAGGGCTGCCCAGTGGTATCACCCTGAAGCTAAATAACCTTGTCGATAAAGGCCTGGTTGATCGTCTGTATGCGGCCTCCAGCTCCGGCGTACCGGTTAATCTGCTGGTTCGCGGAATGTGTTCGCTGATCCCCAATCTGGAAGGCATTAGCGACAACATTCGTGCCATCAGTATTGTTGACCGTTACCTTGAACATGACCGGGTTTATATTTTTGAAAATGGCGGCGATAAAAAGGTCTACCTTTCTTCCGCCGACTGGATGACGCGCAATATTGATTATCGTATTGAAGTGGCGACGCCGCTGCTCGATCCGCGCCTGAAGCAGCGGGTACTGGACATCATCGACATATTGTTCAGCGATACGGTCAAAGCACGTTATATCGATAAAGAACTCAGTAATCGCTACGTTCCCCGCGGCAATCGCCGCAAAGTACGGGCGCAGTTGGCGATTTATGACTACATCAAATCACTCGAACAACCTGAATAA", - "dna_sequence_length": 2067, - "functions": [ - "polyphosphate kinase, component of RNA degradosome" - ], - "id": "CDS_2483", - "location": [ - [ - "NC_000913", - 2623044, - "+", - 2067 - ] - ], - "md5": "55b994c15df0caddafbd02e2305f38b8", - "parent_gene": "", - "protein_md5": "2d49aa196f947cd0875399f792333c9a", - "protein_translation": "MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSNNLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEMARNQIFLINERQLSVNQQNWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVEIIRGDTIRYALLEIPSDKVPRFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYDALNAYSMKMTRDAEYDLVHEMEASLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVLREKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRHIWFDKAQFRNGFDAIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRKENGEVVRYAHIGTGNFNEKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMVSPQNSRRLLYEMVDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASSSGVPVNLLVRGMCSLIPNLEGISDNIRAISIVDRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEVATPLLDPRLKQRVLDIIDILFSDTVKARYIDKELSNRYVPRGNRRKVRAQLAIYDYIKSLEQPE", - "protein_translation_length": 688, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008238" - ], - [ - "gene_synonym", - "GeneID:946970" - ], - [ - "gene_synonym", - "JW2487" - ], - [ - "gene_synonym", - "NP_416997.1" - ], - [ - "gene_synonym", - "EcoGene:EG11403" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFL6" - ], - [ - "gene_synonym", - "b2502" - ], - [ - "gene_synonym", - "ECK2498" - ], - [ - "gene_synonym", - "ppx" - ], - [ - "gene_synonym", - "GI:16130427" - ] - ], - "dna_sequence": "ATGCCAATACACGATAAATCCCCTCGTCCGCAGGAGTTTGCTGCGGTCGATCTTGGTTCAAACAGTTTTCACATGGTCATAGCCCGTGTGGTAGATGGTGCCATGCAGATTATTGGCCGCCTGAAACAGCGGGTGCATCTGGCGGACGGCCTGGGGCCAGATAATATGTTGAGTGAAGAGGCAATGACGCGCGGTTTAAACTGTCTGTCGCTGTTTGCCGAACGGCTACAAGGGTTTTCTCCTGCCAGCGTCTGTATAGTTGGTACCCATACGCTGCGTCAGGCGCTGAACGCCACTGACTTTCTGAAACGCGCGGAAAAGGTCATTCCCTACCCGATTGAAATTATTTCCGGTAATGAAGAAGCCCGTCTGATTTTTATGGGCGTGGAACATACCCAACCGGAAAAAGGTCGCAAACTGGTTATTGATATTGGCGGCGGATCTACGGAACTGGTGATTGGTGAAAATTTCGAACCTATTCTCGTTGAAAGCCGCCGGATGGGTTGTGTCAGCTTTGCCCAGCTTTATTTTCCTGGCGGGGTCATCAATAAAGAGAATTTTCAGCGCGCTCGCATGGCGGCAGCACAAAAACTGGAAACTTTAACCTGGCAATTCCGTATTCAGGGCTGGAACGTTGCAATGGGCGCTTCCGGTACCATAAAAGCCGCCCATGAAGTGTTAATGGAAATGGGCGAGAAAGACGGGATAATTACCCCGGAACGTCTGGAAAAACTGGTAAAAGAAGTTTTACGTCACCGTAATTTCGCATCGCTGAGTTTACCGGGTCTTTCCGAAGAGCGGAAAACAGTCTTCGTTCCGGGACTGGCGATTTTATGCGGTGTGTTTGATGCTTTAGCCATCCGTGAACTGCGCCTTTCTGACGGGGCGTTACGCGAAGGCGTACTGTATGAAATGGAAGGACGTTTCCGTCATCAGGATGTGCGTAGTCGCACCGCCAGCAGCCTCGCCAACCAGTATCACATCGACAGCGAACAGGCCCGACGGGTGCTGGATACCACTATGCAAATGTACGAACAGTGGCGGGAACAGCAACCGAAGCTGGCGCATCCGCAACTGGAGGCGCTACTGCGATGGGCCGCCATGCTGCATGAGGTCGGGTTGAATATCAACCACAGCGGTTTGCATCGCCACTCCGCTTATATTCTGCAAAACAGTGACTTGCCGGGTTTTAATCAGGAACAGCAGCTGATGATGGCGACACTGGTGCGCTATCACCGTAAAGCGATTAAGCTCGACGATCTACCGCGCTTTACCTTGTTTAAGAAGAAACAGTTCCTGCCACTGATACAGCTATTGCGCCTTGGCGTATTACTCAACAATCAACGTCAGGCAACCACCACACCGCCAACATTGACGCTGATTACTGATGACAGTCACTGGACACTGCGTTTCCCGCATGACTGGTTTAGTCAGAATGCGCTGGTACTGCTTGATCTGGAAAAGGAGCAAGAATACTGGGAAGGCGTGGCTGGCTGGCGGTTGAAAATTGAAGAAGAAAGTACACCAGAAATCGCCGCTTAA", - "dna_sequence_length": 1542, - "functions": [ - "exopolyphosphatase" - ], - "id": "CDS_2484", - "location": [ - [ - "NC_000913", - 2625115, - "+", - 1542 - ] - ], - "md5": "9dd7667c4032fa2f0066a04707a1ba78", - "parent_gene": "", - "protein_md5": "2421f9ce637269efdde42df52115e903", - "protein_translation": "MPIHDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASGTIKAAHEVLMEMGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQARRVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQNSDLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEESTPEIAA", - "protein_translation_length": 513, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2488" - ], - [ - "gene_synonym", - "yfgF" - ], - [ - "gene_synonym", - "NP_416998.1" - ], - [ - "gene_synonym", - "GeneID:946968" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77172" - ], - [ - "gene_synonym", - "GI:16130428" - ], - [ - "gene_synonym", - "EcoGene:EG14202" - ], - [ - "gene_synonym", - "b2503" - ], - [ - "gene_synonym", - "ECK2499" - ], - [ - "gene_synonym", - "ASAP:ABE-0008240" - ] - ], - "dna_sequence": "ATGAAACTGAATGCAACTTATATAAAAATACGTGATAAATGGTGGGGGCTTCCGCTGTTCCTGCCTTCTTTAATCTTGCCCATTTTCGCCCACATTAATACTTTCGCGCATATTTCTTCCGGTGAGGTTTTTCTCTTTTATCTGCCTCTGGCACTGATGATCAGCATGATGATGTTTTTCAGCTGGGCGGCATTGCCAGGGATCGCCTTAGGGATTTTTGTCCGCAAATATGCAGAGCTGGGTTTTTACGAAACGCTATCATTAACGGCTAATTTTATTATCATTATCATTCTCTGTTGGGGCGGTTACAGGGTCTTTACTCCCCGGCGTAACAACGTTTCACATGGTGATACCCGTTTAATTTCCCAGCGTATATTCTGGCAGATTGTGTTTCCTGCAACGCTGTTTCTGATACTTTTCCAGTTTGCTGCATTTGTAGGATTACTGGCGAGCAGAGAAAATCTGGTCGGTGTCATGCCTTTTAACCTCGGGACTTTAATCAATTATCAGGCCTTACTGGTGGGTAATCTGATCGGTGTCCCGCTGTGCTACTTCATCATTCGGGTAGTGCGAAATCCATTTTATTTACGTAGCTATTATTCGCAATTAAAACAGCAGGTTGATGCCAAAGTCACCAAAAAAGAGTTCGCGCTCTGGCTACTGGCATTAGGTGCTTTATTGTTGCTGTTATGCATGCCGTTAAATGAAAAAAGCACAATTTTTAGCACCAATTATACCTTGTCATTATTGCTGCCCCTGATGATGTGGGGAGCGATGCGCTATGGTTATAAGCTGATTTCGCTGCTCTGGGCGGTCGTGTTGATGATCAGCATCCACAGCTATCAAAATTACATTCCCATTTATCCTGGCTATACCACGCAGCTGACCATAACCTCCTCCAGTTATCTGGTATTCTCTTTTATTGTCAATTATATGGCTGTACTGGCAACCCGTCAGAGAGCGGTAGTCAGACGCATTCAGCGGCTTGCGTATGTGGACCCGGTGGTTCATCTGCCAAATGTTCGCGCCCTGAATCGCGCGTTGCGTGATGCCCCCTGGTCTGCGCTTTGTTATTTACGCATCCCTGGCATGGAAATGCTGGTTAAGAACTATGGCATCATGCTGCGGATTCAATACAAGCAAAAACTTTCTCACTGGCTGTCACCCTTGCTGGAACCGGGTGAAGATGTTTATCAGCTTTCGGGTAACGATCTCGCGCTGCGACTGAATACAGAATCGCACCAGGAGCGCATTACCGCACTGGATAGCCATCTCAAGCAATTTCGTTTCTTTTGGGATGGCATGCCGATGCAACCGCAGATTGGCGTCAGTTACTGCTATGTGCGCTCGCCAGTGAATCATATCTACCTGCTGCTGGGAGAGCTAAATACGGTCGCCGAACTTTCCATCGTGACCAACGCCCCGGAAAATATGCAGCGTCGCGGGGCAATGTATTTGCAACGCGAATTGAAAGATAAAGTCGCGATGATGAATCGACTACAGCAGGCGCTGGAACACAACCATTTTTTCCTGATGGCCCAGCCGATTACCGGTATGCGTGGTGATGTTTACCATGAAATTCTTCTGCGCATGAAAGGTGAGAATGATGAACTGATCAGCCCCGATAGCTTCTTGCCGGTCGCGCACGAATTTGGTTTATCGTCGAGTATCGACATGTGGGTCATTGAGCATACGCTGCAATTTATGGCTGAAAACAGAGCGAAGATGCCCGCTCACCGTTTTGCTATTAATCTGTCTCCAACCTCGGTATGTCAGGCTCGTTTTCCTGTTGAAGTCAGTCAGTTGCTGGCTAAATATCAGATTGAAGCGTGGCAACTTATTTTTGAAGTCACCGAAAGTAATGCTCTGACCAATGTTAAGCAGGCGCAAATCACCTTGCAGCATCTTCAGGAATTAGGCTGCCAGATTGCGATTGATGATTTCGGCACCGGCTACGCCAGCTATGCGCGGCTTAAAAATGTGAATGCCGATCTGCTTAAAATTGACGGCAGTTTTATCCGCAATATTGTGTCAAATAGTCTGGATTATCAGATAGTGGCATCGATTTGCCACCTGGCGCGAATGAAGAAAATGCTGGTAGTGGCAGAGTACGTTGAAAACGAAGAGATCCGCGAGGCGGTGCTCTCTTTGGGGATCGATTATATGCAGGGTTATCTTATTGGTAAGCCGCAGCCGTTAATTGATACGCTGAATGAAATCGAACCCATTCGCGAAAGTGCCTGA", 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"MKLNATYIKIRDKWWGLPLFLPSLILPIFAHINTFAHISSGEVFLFYLPLALMISMMMFFSWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPVEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMLVVAEYVENEEIREAVLSLGIDYMQGYLIGKPQPLIDTLNEIEPIRESA", - "protein_translation_length": 747, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_416999.1" - ], - [ - "gene_synonym", - "yfgG" - ], - [ - "gene_synonym", - "JW5399" - ], - [ - "gene_synonym", - "GeneID:946980" - ], - [ - "gene_synonym", - "ECK2500" - ], - [ - "gene_synonym", - "b2504" - ], - [ - "gene_synonym", - "GI:16130429" - ], - [ - "gene_synonym", - "EcoGene:EG14203" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64545" - ], - [ - "gene_synonym", - "ASAP:ABE-0008247" - ] - ], - "dna_sequence": "GTGAGTCAGGCAACCAGTATGCGAAAACGACACCGATTTAACAGTCGCATGACCCGTATCGTACTGCTCATCAGCTTTATCTTCTTCTTTGGCCGTTTTATCTACTCGTCCGTCGGTGCCTGGCAGCACCATCAGAGCAAAAAAGAAGCTCAGCAATCCACACTCTCCGTCGAATCACCGGTACAACGTTAG", - "dna_sequence_length": 192, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2486", - "location": [ - [ - "NC_000913", - 2629290, - "+", - 192 - ] - ], - "md5": "ba8316daa1e8bd99bd0ad5e11436e92d", - "parent_gene": "", - "protein_md5": "02fa36f50e6ee42957a7e95144390f9a", - "protein_translation": "MSQATSMRKRHRFNSRMTRIVLLISFIFFFGRFIYSSVGAWQHHQSKKEAQQSTLSVESPVQR", - "protein_translation_length": 63, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P65290" - ], - [ - "gene_synonym", - "NP_417000.1" - ], - [ - "gene_synonym", - "GeneID:945709" - ], - [ - "gene_synonym", - "JW5400" - ], - [ - "gene_synonym", - "yfgH" - ], - [ - "gene_synonym", - "ECK2501" - ], - [ - "gene_synonym", - "b2505" - ], - [ - "gene_synonym", - "EcoGene:EG14204" - ], - [ - "gene_synonym", - "ASAP:ABE-0008250" - ], - [ - "gene_synonym", - "GI:16130430" - ] - ], - "dna_sequence": "GTGATGAAATTTAAAAAATGTCTTCTGCCTGTGGCAATGTTAGCGTCATTCACTCTGGCAGGATGCCAGTCAAATGCTGACGATCATGCTGCCGATGTTTATCAAACCGATCAACTGAATACCAAACAAGAAACTAAAACCGTTAATATTATTTCCATTCTTCCCGCAAAAGTTGCCGTAGACAACTCCCAAAATAAACGGAACGCACAAGCCTTCGGCGCGCTTATTGGCGCAGTCGCTGGCGGTGTTATCGGCCACAACGTCGGGTCTGGCAGCAATTCCGGAACGACGGCAGGTGCAGTTGGCGGCGGAGCTGTAGGCGCGGCAGCGGGTTCTATGGTGAATGATAAAACCTTAGTGGAAGGTGTTTCTTTAACCTATAAGGAAGGCACCAAAGTGTATACCTCTACCCAGGTGGGTAAAGAGTGCCAGTTTACGACAGGTTTAGCCGTTGTTATTACCACGACGTATAACGAAACGCGTATTCAGCCAAATACCAAATGTCCTGAAAAGAGCTAA", - "dna_sequence_length": 519, - "functions": [ - "outer membrane integrity lipoprotein" - ], - "id": "CDS_2487", - "location": [ - [ - "NC_000913", - 2629792, - "+", - 519 - ] - ], - "md5": "f36909bcde30fd614b5bc9ba1fe50fc0", - "parent_gene": "", - "protein_md5": "ad882ab50de399dcd65ae25e7885da76", - "protein_translation": "MMKFKKCLLPVAMLASFTLAGCQSNADDHAADVYQTDQLNTKQETKTVNIISILPAKVAVDNSQNKRNAQAFGALIGAVAGGVIGHNVGSGSNSGTTAGAVGGGAVGAAAGSMVNDKTLVEGVSLTYKEGTKVYTSTQVGKECQFTTGLAVVITTTYNETRIQPNTKCPEKS", - "protein_translation_length": 172, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76573" - ], - [ - "gene_synonym", - "GI:16130431" - ], - [ - "gene_synonym", - "JW2490" - ], - [ - "gene_synonym", - "yfgI" - ], - [ - "gene_synonym", - "ECK2502" - ], - [ - "gene_synonym", - "GeneID:945168" - ], - [ - "gene_synonym", - "b2506" - ], - [ - "gene_synonym", - "EcoGene:EG14205" - ], - [ - "gene_synonym", - "NP_417001.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008252" - ] - ], - "dna_sequence": "ATGAAGAAAGTTTTTCTTTGCGCCATCTTAGCCTCCTTAAGCTATCCGGCTATCGCCTCATCATTGCAGGATCAACTCTCTGCTGTCGCAGAAGCGGAACAGCAAGGTAAAAATGAAGAGCAAAGGCAGCATGACGAATGGGTCGCGGAGCGCAACAGGGAAATCCAGCAAGAGAAGCAACGTCGCGCAAATGCCCAGGCCGCCGCTAACAAAAGAGCGGCAACGGCAGCGGCAAATAAGAAAGCTCGTCAGGATAAACTGGACGCCGAAGCCTCTGCGGACAAAAAACGCGATCAAAGTTATGAAGATGAGCTACGCAGCTTAGAGATTCAGAAACAAAAACTGGCGCTGGCGAAAGAAGAAGCCCGCGTTAAGCGAGAAAACGAATTTATCGATCAGGAACTGAAGCACAAAGCTGCGCAAACCGATGTGGTGCAATCTGAAGCTGACGCCAACAGAAATATGACTGAAGGCGGTCGCGATCTGATGAAAAGCGTGGGCAAAGCAGAAGAGAACAAATCGGACAGCTGGTTTAATTAA", - "dna_sequence_length": 540, - "functions": [ - "nalidixic acid resistance protein, putative periplasmic protein" - ], - "id": "CDS_2488", - "location": [ - [ - "NC_000913", - 2630326, - "+", - 540 - ] - ], - "md5": "f971a87a2c127c45a8943f7201a857a9", - "parent_gene": "", - "protein_md5": "5ad11b8dd15ac87a21bcfaf34df828d2", - "protein_translation": "MKKVFLCAILASLSYPAIASSLQDQLSAVAEAEQQGKNEEQRQHDEWVAERNREIQQEKQRRANAQAAANKRAATAAANKKARQDKLDAEASADKKRDQSYEDELRSLEIQKQKLALAKEEARVKRENEFIDQELKHKAAQTDVVQSEADANRNMTEGGRDLMKSVGKAEENKSDSWFN", - "protein_translation_length": 179, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04079" - ], - [ - "gene_synonym", - "GeneID:947334" - ], - [ - "gene_synonym", - "guaA" - ], - [ - "gene_synonym", - "GI:16130432" - ], - [ - "gene_synonym", - "JW2491" - ], - [ - "gene_synonym", - "ECK2503" - ], - [ - "gene_synonym", - "b2507" - ], - [ - "gene_synonym", - "EcoGene:EG10420" - ], - [ - "gene_synonym", - "NP_417002.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008254" - ] - ], - "dna_sequence": "ATGACGGAAAACATTCATAAGCATCGCATCCTCATTCTGGACTTCGGTTCTCAGTACACTCAACTGGTTGCGCGCCGCGTGCGTGAGCTGGGTGTTTACTGCGAACTGTGGGCGTGGGATGTGACAGAAGCACAAATTCGTGACTTCAATCCAAGCGGCATTATTCTTTCCGGCGGCCCGGAAAGTACTACTGAAGAAAACAGTCCGCGTGCGCCGCAGTATGTCTTTGAAGCAGGCGTACCGGTATTCGGCGTTTGCTATGGCATGCAGACCATGGCAATGCAGTTGGGCGGTCACGTTGAAGCCTCTAACGAACGTGAATTTGGCTACGCGCAGGTTGAAGTCGTAAACGACAGCGCACTGGTTCGCGGTATCGAAGATGCGCTGACCGCAGACGGTAAACCGCTGCTCGATGTCTGGATGAGCCACGGCGATAAAGTTACCGCTATTCCGTCCGACTTCATCACCGTAGCCAGCACCGAAAGCTGCCCGTTTGCCATTATGGCTAACGAAGAAAAACGCTTCTATGGCGTACAGTTCCACCCGGAAGTGACTCATACCCGCCAGGGTATGCGCATGCTGGAGCGTTTTGTGCGTGATATCTGCCAGTGTGAAGCCCTGTGGACGCCAGCGAAAATTATCGACGATGCTGTAGCTCGCATCCGCGAGCAGGTAGGCGACGATAAAGTCATCCTCGGCCTCTCTGGTGGTGTGGATTCCTCCGTAACCGCAATGCTGCTGCACCGCGCTATCGGTAAAAACCTGACTTGCGTATTCGTCGACAACGGCCTGCTGCGCCTCAACGAAGCAGAGCAGGTTCTGGATATGTTTGGCGATCACTTTGGTCTTAACATTGTTCACGTACCGGCAGAAGATCGCTTCCTGTCAGCGCTGGCTGGCGAAAACGATCCGGAAGCAAAACGTAAAATCATCGGTCGCGTTTTCGTTGAAGTATTCGATGAAGAAGCGCTGAAACTGGAAGACGTGAAGTGGCTGGCGCAGGGCACCATCTACCCTGACGTTATCGAATCTGCGGCGTCTGCAACCGGTAAAGCACACGTCATCAAATCTCACCACAACGTGGGCGGCCTGCCGAAAGAGATGAAGATGGGCCTGGTTGAACCGCTGAAAGAGCTGTTCAAAGACGAAGTGCGTAAGATTGGTCTGGAGCTGGGCCTGCCGTACGACATGCTGTACCGTCACCCGTTCCCGGGACCAGGCCTTGGCGTTCGTGTTCTGGGTGAAGTGAAGAAAGAGTACTGTGACCTGCTGCGCCGTGCTGACGCCATCTTCATTGAAGAACTGCGTAAAGCGGACCTGTACGACAAAGTCAGCCAGGCGTTCACTGTGTTCCTGCCGGTACGTTCCGTTGGCGTAATGGGCGATGGTCGTAAGTATGACTGGGTTGTCTCTCTGCGTGCTGTCGAAACCATCGACTTTATGACCGCACACTGGGCGCATCTGCCGTACGATTTCCTCGGTCGCGTTTCCAACCGCATTATCAATGAAGTGAACGGTATTTCCCGCGTGGTGTATGACATCAGCGGCAAGCCGCCAGCTACCATTGAGTGGGAATGA", - "dna_sequence_length": 1578, - "functions": [ - "GMP synthetase (glutamine aminotransferase)" - ], - "id": "CDS_2489", - "location": [ - [ - "NC_000913", - 2632535, - "-", - 1578 - ] - ], - "md5": "885e0e88a93d3a2ad6eb790370c48e55", - "parent_gene": "", - "protein_md5": "694c6f10097223dd7c1fd8859599cbca", - "protein_translation": "MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFITVASTESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAVARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIEWE", - "protein_translation_length": 525, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "guaB" - ], - [ - "gene_synonym", - "GI:16130433" - ], - [ - "gene_synonym", - "JW5401" - ], - [ - "gene_synonym", - "NP_417003.1" - ], - [ - "gene_synonym", - "ECK2504" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADG7" - ], - [ - "gene_synonym", - "GeneID:946985" - ], - [ - "gene_synonym", - "guaR" - ], - [ - "gene_synonym", - "EcoGene:EG10421" - ], - [ - "gene_synonym", - "ASAP:ABE-0008257" - ], - [ - "gene_synonym", - "b2508" - ] - ], - "dna_sequence": "ATGCTACGTATCGCTAAAGAAGCTCTGACGTTTGACGACGTTCTCCTCGTTCCTGCTCACTCTACCGTTCTGCCGAATACTGCTGACCTCAGCACCCAGCTGACGAAAACTATTCGTCTGAATATCCCTATGCTTTCCGCAGCAATGGATACCGTAACGGAAGCGCGCCTGGCTATTGCTCTGGCTCAGGAAGGCGGTATCGGCTTTATCCACAAAAACATGTCCATTGAACGCCAGGCAGAAGAAGTTCGCCGTGTGAAAAAACACGAATCTGGTGTGGTGACTGATCCGCAGACTGTTCTGCCAACCACGACGCTGCGCGAAGTGAAAGAACTGACCGAGCGTAACGGTTTTGCGGGCTATCCGGTCGTTACCGAAGAAAACGAACTGGTGGGTATTATCACCGGTCGTGACGTGCGTTTTGTTACCGACCTGAACCAGCCGGTTAGCGTTTACATGACGCCGAAAGAGCGTCTGGTCACCGTGCGTGAAGGTGAAGCCCGTGAAGTGGTGCTGGCAAAAATGCACGAAAAACGCGTTGAAAAAGCGCTGGTGGTTGATGACGAATTCCACCTGATCGGCATGATCACCGTGAAAGACTTCCAGAAAGCGGAACGTAAACCGAACGCCTGTAAAGACGAGCAAGGCCGTCTGCGTGTTGGTGCAGCGGTTGGCGCAGGTGCGGGTAACGAAGAGCGTGTTGACGCGCTGGTTGCCGCAGGCGTTGACGTTCTGCTGATCGACTCCTCCCACGGTCACTCAGAAGGTGTACTGCAACGTATCCGTGAAACCCGTGCTAAATATCCGGATCTGCAAATTATCGGCGGCAACGTGGCAACAGCTGCAGGTGCACGCGCTCTGGCAGAAGCTGGTTGCAGTGCGGTTAAAGTCGGCATTGGCCCTGGCTCTATCTGTACAACTCGTATCGTGACTGGCGTCGGTGTTCCGCAGATTACCGCTGTTGCTGACGCAGTAGAAGCCCTGGAAGGCACCGGTATTCCGGTTATCGCTGATGGCGGTATTCGCTTCTCCGGCGACATCGCCAAAGCTATCGCCGCTGGCGCAAGCGCGGTGATGGTAGGTTCCATGCTGGCGGGTACTGAAGAATCTCCGGGTGAAATCGAACTCTACCAGGGCCGTTCTTACAAATCTTACCGTGGTATGGGTTCCCTGGGCGCGATGTCCAAAGGTTCCTCTGACCGTTATTTCCAGAGCGATAACGCTGCCGACAAACTGGTGCCGGAAGGTATCGAAGGTCGCGTAGCCTATAAAGGTCGCCTGAAAGAGATCATTCACCAGCAGATGGGCGGCCTGCGCTCCTGTATGGGTCTGACCGGCTGTGGTACTATCGACGAACTGCGTACTAAAGCGGAGTTTGTACGTATCAGCGGTGCGGGCATTCAGGAAAGCCACGTTCACGACGTGACCATTACTAAAGAGTCCCCGAACTACCGTCTGGGCTCCTGA", - "dna_sequence_length": 1467, - "functions": [ - "IMP dehydrogenase" - ], - "id": "CDS_2490", - "location": [ - [ - "NC_000913", - 2634070, - "-", - 1467 - ] - ], - "md5": "bf7c92f98cfd72f48fc356e07d388b1c", - "parent_gene": "", - "protein_md5": "116bddd68b8f96de06d9da6d574d1a85", - "protein_translation": "MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVRFVTDLNQPVSVYMTPKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKAERKPNACKDEQGRLRVGAAVGAGAGNEERVDALVAAGVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGGNVATAAGARALAEAGCSAVKVGIGPGSICTTRIVTGVGVPQITAVADAVEALEGTGIPVIADGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGEIELYQGRSYKSYRGMGSLGAMSKGSSDRYFQSDNAADKLVPEGIEGRVAYKGRLKEIIHQQMGGLRSCMGLTGCGTIDELRTKAEFVRISGAGIQESHVHDVTITKESPNYRLGS", - "protein_translation_length": 488, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417004.1" - ], - [ - "gene_synonym", - "GeneID:946988" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04994" - ], - [ - "gene_synonym", - "GI:16130434" - ], - [ - "gene_synonym", - "JW2493" - ], - [ - "gene_synonym", - "ECK2505" - ], - [ - "gene_synonym", - "ASAP:ABE-0008263" - ], - [ - "gene_synonym", - "EcoGene:EG11072" - ], - [ - "gene_synonym", - "xse" - ], - [ - "gene_synonym", - "xseA" - ], - [ - "gene_synonym", - "b2509" - ] - ], - "dna_sequence": "ATGTTACCTTCTCAATCCCCTGCAATTTTTACCGTTAGTCGCCTGAATCAAACGGTTCGTCTGCTGCTTGAGCATGAGATGGGACAGGTTTGGATCAGCGGCGAAATTTCTAATTTCACGCAACCAGCTTCCGGTCACTGGTACTTTACACTCAAAGACGACACCGCCCAGGTACGCTGCGCGATGTTCCGCAACAGCAACCGCCGGGTGACCTTCCGCCCACAGCATGGGCAACAAGTTTTAGTTCGCGCCAATATTACGCTCTACGAGCCGCGCGGCGACTACCAGATAATCGTTGAGAGTATGCAGCCGGCCGGTGAAGGGCTGCTGCAACAGAAGTACGAACAGCTCAAAGCGAAGTTGCAGGCTGAAGGTTTGTTCGATCAGCAATACAAAAAACCACTTCCCTCCCCTGCGCATTGCGTTGGTGTGATCACCTCAAAAACCGGTGCTGCGCTACATGATATTTTGCATGTGTTAAAACGTCGCGATCCTTCTCTGCCGGTGATCATCTACCCTGCCGCCGTTCAGGGCGATGACGCGCCGGGGCAAATTGTTCGCGCCATTGAACTGGCGAATCAGCGCAATGAGTGCGACGTATTGATCGTCGGGCGCGGCGGCGGTTCGCTGGAAGATTTATGGAGTTTTAACGACGAACGCGTAGCGCGGGCGATTTTTACCAGCCGCATTCCGGTTGTCAGCGCCGTCGGGCATGAGACGGATGTGACCATTGCCGATTTTGTTGCCGATCTGCGTGCGCCAACGCCGTCTGCCGCCGCTGAAGTAGTGAGCCGTAATCAGCAAGAGTTACTGCGCCAGGTGCAATCGACCCGTCAACGGCTGGAGATGGCGATGGATTATTATCTCGCCAACCGCACACGTCGCTTTACGCAAATTCATCACCGATTACAGCAACAGCATCCGCAGCTCCGGCTGGCACGCCAGCAAACCATGCTTGAGCGCCTGCAAAAGCGAATGAGCTTTGCGCTGGAAAATCAACTTAAGCGTACCGGGCAACAGCAGCAGCGGTTAACACAGCGGCTGAATCAGCAAAATCCACAGCCGAAGATTCATCGCGCGCAAACGCGCATTCAGCAACTGGAATATCGTTTAGCAGAAACCCTGCGCGCACAGCTTAGCGCCACGCGTGAACGTTTCGGTAATGCAGTAACGCACCTCGAAGCCGTAAGCCCACTGTCAACGCTGGCGCGTGGATACAGCGTTACTACTGCTACTGACGGCAATGTACTGAAAAAAGTGAAGCAAGTTAAAGCGGGTGAAATGCTAACCACACGTCTGGAAGACGGCTGGATAGAAAGTGAAGTAAAAAACATCCAGCCAGTAAAAAAATCGCGTAAAAAGGTGCATTAA", - "dna_sequence_length": 1371, - "functions": [ - "exonuclease VII, large subunit" - ], - "id": "CDS_2491", - "location": [ - [ - "NC_000913", - 2634232, - "+", - 1371 - ] - ], - "md5": "62a07ef17298066dd5c93b2539dba1ad", - "parent_gene": "", - "protein_md5": "580de5d36d3d318676bc70348654eab1", - "protein_translation": "MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKLQAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGDDAPGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFNDERVARAIFTSRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQPKIHRAQTRIQQLEYRLAETLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEMLTTRLEDGWIESEVKNIQPVKKSRKKVH", - "protein_translation_length": 456, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76575" - ], - [ - "gene_synonym", - "NP_417005.2" - ], - [ - "gene_synonym", - "ECK2506" - ], - [ - "gene_synonym", - "JW5402" - ], - [ - "gene_synonym", - "b2510" - ], - [ - "gene_synonym", - "GI:90111449" - ], - [ - "gene_synonym", - "GeneID:946984" - ], - [ - "gene_synonym", - "EcoGene:EG14206" - ], - [ - "gene_synonym", - "ASAP:ABE-0008266" - ], - [ - "gene_synonym", - "yfgJ" - ] - ], - "dna_sequence": "ATGGAACTGCATTGTCCACAATGTCAGCATGTGCTTGATCAGGATAACGGCCATGCGCGTTGCCGATCCTGCGGGGAATTTATTGAAATGAAAGCTCTTTGTCCAGACTGCCATCAACCGTTGCAGGTGTTAAAAGCCTGTGGTGCAGTAGATTACTTCTGTCAGCACGGGCATGGCTTGATATCGAAAAAACGCGTTGAATTCGTGCTGGCTTAA", - "dna_sequence_length": 216, - "functions": [ - "DUF1407 family protein" - ], - "id": "CDS_2492", - "location": [ - [ - "NC_000913", - 2635814, - "-", - 216 - ] - ], - "md5": "35a914cef9a052503514eeccd1c7a047", - "parent_gene": "", - "protein_md5": "e4e55dc6a13010f0dbb6e3696e88e31e", - "protein_translation": "MELHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVLKACGAVDYFCQHGHGLISKKRVEFVLA", - "protein_translation_length": 71, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111450" - ], - [ - "gene_synonym", - "ECK2507" - ], - [ - "gene_synonym", - "engA" - ], - [ - "gene_synonym", - "der" - ], - [ - "gene_synonym", - "JW5403" - ], - [ - "gene_synonym", - "yfgK" - ], - [ - "gene_synonym", - "NP_417006.2" - ], - [ - "gene_synonym", - "EcoGene:EG14207" - ], - [ - "gene_synonym", - "ASAP:ABE-0008270" - ], - [ - "gene_synonym", - "GeneID:946983" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6P5" - ], - [ - "gene_synonym", - "b2511" - ] - ], - "dna_sequence": "ATGGTACCTGTGGTCGCGCTTGTCGGGCGCCCTAACGTAGGAAAATCCACGTTATTTAACCGTCTAACTCGCACCCGAGATGCGCTGGTTGCGGATTTCCCGGGTCTGACTCGTGACCGTAAGTACGGTCGTGCGGAAATTGAAGGCCGTGAGTTTATCTGTATTGATACCGGCGGGATTGATGGCACAGAAGACGGTGTAGAAACCCGCATGGCGGAACAGTCGCTGCTGGCGATTGAAGAAGCGGACGTCGTACTGTTTATGGTGGATGCGCGCGCGGGCCTGATGCCGGCAGATGAAGCGATTGCCAAACATCTGCGCTCCCGTGAAAAACCGACCTTCCTGGTGGCAAACAAAACTGACGGTCTGGATCCCGATCAGGCAGTGGTTGATTTCTACTCGCTTGGTTTAGGTGAAATCTACCCGATCGCCGCGTCTCACGGTCGTGGCGTATTAAGTCTGCTGGAGCATGTGCTGCTGCCGTGGATGGAAGATCTCGCACCGCAAGAGGAAGTCGACGAAGACGCTGAATACTGGGCGCAATTTGAAGCGGAAGAGAACGGCGAAGAAGAAGAGGAAGACGACTTCGACCCGCAAAGTCTGCCGATCAAACTGGCGATTGTGGGTCGTCCGAACGTAGGTAAGTCTACACTCACTAACCGTATTCTTGGTGAAGAGCGCGTTGTTGTTTACGACATGCCTGGCACGACGCGTGACAGCATCTACATCCCAATGGAACGCGATGGACGTGAGTATGTGCTCATTGACACCGCTGGCGTACGTAAACGCGGCAAAATCACCGATGCTGTAGAGAAATTCTCCGTAATCAAAACGTTGCAGGCCATTGAAGACGCCAACGTGGTGATGTTAGTGATTGATGCGCGCGAAGGTATTTCCGATCAGGATCTCTCGCTGCTGGGCTTTATTCTCAATAGTGGGCGCTCACTTGTCATTGTGGTGAATAAGTGGGATGGCCTGAGTCAGGAAGTGAAAGAGCAGGTGAAAGAAACGCTGGACTTCCGTCTGGGCTTTATCGATTTTGCTCGTGTGCACTTTATCTCTGCCTTGCACGGCAGTGGTGTTGGTAACTTGTTTGAATCAGTACGTGAAGCGTATGACAGCTCCACCCGTCGTGTGGGGACCTCTATGCTGACGCGCATCATGACGATGGCTGTTGAAGATCACCAACCGCCGCTGGTACGCGGTCGTCGTGTGAAGCTGAAATATGCCCACGCCGGTGGTTATAACCCGCCGATTGTGGTGATTCACGGTAATCAGGTGAAAGACCTGCCTGATTCCTACAAGCGCTACTTGATGAACTACTTCCGCAAATCGCTGGACGTAATGGGATCGCCGATTCGTATTCAGTTCAAAGAAGGGGAAAACCCGTATGCGAATAAGCGTAACACCCTGACGCCAACCCAGATGCGTAAACGTAAGCGTCTGATGAAGCACATCAAGAAAAATAAATAA", - "dna_sequence_length": 1473, - "functions": [ - "GTPase", - "multicopy suppressor of ftsJ" - ], - "id": "CDS_2493", - "location": [ - [ - "NC_000913", - 2637356, - "-", - 1473 - ] - ], - "md5": "a2072f521446cf5534c5dc641691f161", - "parent_gene": "", - "protein_md5": "91ef54ffa17e6a062f64b916b7f842ac", - "protein_translation": "MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAPQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKNK", - "protein_translation_length": 490, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130437" - ], - [ - "gene_synonym", - "ECK2508" - ], - [ - "gene_synonym", - "yfgL" - ], - [ - "gene_synonym", - "b2512" - ], - [ - "gene_synonym", - "JW2496" - ], - [ - "gene_synonym", - "bamB" - ], - [ - "gene_synonym", - "ASAP:ABE-0008272" - ], - [ - "gene_synonym", - "NP_417007.1" - ], - [ - "gene_synonym", - "GeneID:946982" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77774" - ], - [ - "gene_synonym", - "EcoGene:EG14208" - ] - ], - "dna_sequence": "ATGCAATTGCGTAAATTACTGCTGCCAGGACTGCTTTCCGTTACCCTTTTAAGCGGCTGTTCGCTGTTTAACAGCGAAGAAGATGTGGTAAAGATGTCCCCATTGCCAACCGTTGAAAACCAGTTTACGCCGACCACGGCGTGGAGCACTTCCGTTGGTAGCGGCATTGGCAACTTCTATTCCAATCTTCATCCGGCACTGGCGGACAACGTTGTCTATGCAGCGGACCGCGCTGGTTTAGTAAAAGCGCTGAATGCGGATGATGGCAAAGAAATCTGGTCTGTCAGCCTGGCCGAGAAAGATGGCTGGTTCTCTAAAGAGCCTGCATTACTTTCTGGCGGTGTGACCGTGTCTGGTGGGCATGTCTACATTGGCAGCGAAAAGGCGCAGGTTTACGCGCTGAATACCAGCGATGGTACTGTGGCATGGCAAACTAAAGTCGCGGGTGAAGCACTTTCGCGCCCGGTGGTCAGCGACGGTCTGGTGTTAATCCACACCAGTAACGGTCAGTTACAAGCGCTGAACGAAGCTGACGGCGCTGTCAAATGGACAGTTAACCTCGATATGCCTTCGCTCTCTTTGCGTGGCGAGTCTGCGCCGACAACGGCTTTTGGTGCGGCCGTCGTGGGGGGCGATAATGGTCGCGTCAGCGCAGTGCTGATGGAACAGGGCCAGATGATTTGGCAGCAGCGTATTTCCCAGGCGACCGGTTCTACCGAAATTGACCGTCTGAGCGATGTTGACACGACTCCCGTCGTTGTTAACGGCGTTGTTTTCGCGCTGGCCTATAATGGTAACCTGACGGCGCTTGATCTGCGCAGTGGTCAGATTATGTGGAAACGCGAACTGGGTTCGGTGAATGATTTCATCGTCGACGGCAATCGCATCTATCTGGTCGATCAAAATGACCGGGTGATGGCGTTGACCATTGATGGCGGCGTTACGCTGTGGACACAAAGCGATCTGCTGCATCGCCTGCTGACTTCTCCGGTGCTGTATAATGGCAACCTGGTGGTCGGTGACAGTGAAGGTTATCTGCACTGGATTAACGTCGAAGATGGTCGTTTCGTTGCCCAGCAAAAAGTTGATAGTTCCGGTTTCCAGACTGAACCGGTTGCCGCTGACGGCAAACTGCTGATCCAGGCAAAAGACGGAACCGTGTACTCTATTACACGTTAA", - "dna_sequence_length": 1179, - "functions": [ - "BamABCDE complex OM biogenesis lipoprotein" - ], - "id": "CDS_2494", - "location": [ - [ - "NC_000913", - 2638652, - "-", - 1179 - ] - ], - "md5": "b53788ec5c24e7ab9b8119932a9dcfdc", - "parent_gene": "", - "protein_md5": "6837898a7c2629891f67bd0ac6baa6ce", - "protein_translation": "MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR", - "protein_translation_length": 392, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76576" - ], - [ - "gene_synonym", - "ECK2509" - ], - [ - "gene_synonym", - "b2513" - ], - [ - "gene_synonym", - "yfgM" - ], - [ - "gene_synonym", - "GeneID:946981" - ], - [ - "gene_synonym", - "GI:16130438" - ], - [ - "gene_synonym", - "JW2497" - ], - [ - "gene_synonym", - "ASAP:ABE-0008274" - ], - [ - "gene_synonym", - "NP_417008.1" - ], - [ - "gene_synonym", - "EcoGene:EG14209" - ] - ], - "dna_sequence": "GTGGAAATTTACGAGAACGAAAACGACCAGGTAGAAGCGGTTAAACGCTTTTTTGCTGAAAATGGCAAAGCACTGGCTGTTGGGGTGATTTTGGGCGTTGGCGCACTGATTGGCTGGCGCTACTGGAACAGCCATCAGGTTGATTCTGCACGCTCCGCTTCTCTTGCCTATCAAAATGCGGTTACCGCAGTGAGCGAAGGCAAACCGGATAGCATCCCGGCGGCGGAAAAATTTGCTGCTGAAAATAAAAATACTTATGGTGCGCTGGCTTCTTTGGAACTTGCGCAGCAATTTGTTGACAAAAATGAACTAGAGAAAGCTGCCGCCCAGTTACAACAGGGGCTGGCAGACACGAGCGATGAAAATCTCAAAGCCGTGATAAATCTGCGTCTTGCTCGCGTTCAGGTACAGCTCAAGCAGGCTGATGCCGCGCTGAAAACCCTTGATACCATCAAAGGTGAAGGGTGGGCTGCCATTGTTGCCGACCTGCGTGGTGAAGCATTGCTGAGCAAAGGTGATAAGCAAGGTGCGCGTAGTGCATGGGAAGCAGGCGTGAAAAGCGATGTTACTCCGGCACTGAGCGAAATGATGCAGATGAAAATTAATAATTTGTCCATCTGA", - "dna_sequence_length": 621, - "functions": [ - "ancillary SecYEG translocon subunit", - "putative anti-RcsB factor" - ], - "id": "CDS_2495", - "location": [ - [ - "NC_000913", - 2639283, - "-", - 621 - ] - ], - "md5": "e29d57bd63282fb6d0b8b6470e502e59", - "parent_gene": "", - "protein_md5": "7be0ae53022bd373b7732ea7c0a31e64", - "protein_translation": "MEIYENENDQVEAVKRFFAENGKALAVGVILGVGALIGWRYWNSHQVDSARSASLAYQNAVTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKNELEKAAAQLQQGLADTSDENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIVADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKINNLSI", - "protein_translation_length": 206, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10453" - ], - [ - "gene_synonym", - "JW2498" - ], - [ - "gene_synonym", - "ECK2510" - ], - [ - "gene_synonym", - "GI:16130439" - ], - [ - "gene_synonym", - "GeneID:946989" - ], - [ - "gene_synonym", - "b2514" - ], - [ - "gene_synonym", - "NP_417009.1" - ], - [ - "gene_synonym", - "hisS" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60906" - ], - [ - "gene_synonym", - "ASAP:ABE-0008278" - ] - ], - "dna_sequence": "GTGGCAAAAAACATTCAAGCCATTCGCGGCATGAACGATTACCTGCCTGGCGAAACGGCCATCTGGCAGCGCATTGAAGGCACACTGAAAAACGTGCTCGGCAGCTACGGTTACAGTGAAATCCGCTTGCCGATTGTAGAGCAGACCCCGCTATTCAAACGTGCGATTGGTGAAGTCACCGACGTGGTTGAAAAAGAGATGTACACCTTTGAGGATCGCAATGGCGACAGCCTGACTCTGCGCCCTGAAGGGACGGCGGGCTGTGTACGCGCCGGCATCGAGCATGGTCTTCTGTACAATCAGGAACAGCGTCTGTGGTATATCGGGCCGATGTTCCGTCACGAGCGTCCGCAGAAAGGGCGTTATCGTCAGTTCCATCAGTTGGGCTGCGAAGTTTTCGGTCTGCAAGGTCCGGATATCGACGCTGAACTGATTATGCTCACTGCCCGCTGGTGGCGCGCGCTGGGTATTTCCGAGCACGTAACTCTTGAGCTGAACTCTATCGGTTCGCTGGAAGCACGCGCCAATTACCGCGATGCGCTGGTGGCATTCCTTGAGCAGCATAAAGAAAAGCTGGACGAAGACTGCAAACGCCGCATGTACACTAACCCGCTGCGCGTGCTGGATTCAAAAAATCCGGAAGTGCAGGCGCTTCTCAACGACGCTCCGGCATTAGGTGACTATCTGGACGAGGAATCTCGTGAGCATTTTGCCGGTCTGTGCAAACTGCTGGAGAGCGCGGGGATCGCTTACACCGTAAACCAGCGTCTGGTGCGTGGTCTGGATTACTACAACCGTACCGTTTTCGAGTGGGTGACTAACAGTCTCGGCTCCCAGGGCACCGTGTGTGCAGGCGGTCGTTATGACGGTCTTGTGGAACAACTGGGCGGTCGTGCAACACCGGCTGTCGGTTTTGCTATGGGCCTCGAACGTCTTGTATTGTTAGTACAGGCCGTTAATCCGGAATTTAAAGCCGATCCTGTTGTCGATATATACCTGGTGGCTTCAGGTGCTGATACACAATCTGCGGCTATGGCATTAGCTGAGCGTCTGCGTGATGAATTACCGGGCGTGAAATTGATGACCAACCACGGCGGCGGCAACTTTAAGAAACAGTTTGCCCGTGCTGATAAATGGGGTGCCCGCGTTGCTGTGGTGCTGGGTGAGTCTGAAGTGGCTAACGGCACAGCAGTAGTGAAGGATTTGCGCTCTGGTGAGCAAACGGCAGTTGCGCAGGATAGCGTAGCCGCGCATTTGCGCACGTTACTGGGTTAA", - "dna_sequence_length": 1275, - "functions": [ - "histidyl tRNA synthetase" - ], - "id": "CDS_2496", - "location": [ - [ - "NC_000913", - 2640575, - "-", - 1275 - ] - ], - "md5": "86ac3f5da65f7bc4fd3e9f5a0f34bd1e", - "parent_gene": "", - "protein_md5": "38ca34b1ed3568ea58cb6d66102b10c6", - "protein_translation": "MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARANYRDALVAFLEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQALLNDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLRTLLG", - "protein_translation_length": 424, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2499" - ], - [ - "gene_synonym", - "GeneID:946991" - ], - [ - "gene_synonym", - "ASAP:ABE-0008281" - ], - [ - "gene_synonym", - "ECK2511" - ], - [ - "gene_synonym", - "NP_417010.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P62620" - ], - [ - "gene_synonym", - "b2515" - ], - [ - "gene_synonym", - "EcoGene:EG10370" - ], - [ - "gene_synonym", - "gcpE" - ], - [ - "gene_synonym", - "ispG" - ], - [ - "gene_synonym", - "GI:16130440" - ] - ], - "dna_sequence": "ATGCATAACCAGGCTCCAATTCAACGTAGAAAATCAACACGTATTTACGTTGGGAATGTGCCGATTGGCGATGGTGCTCCCATCGCCGTACAGTCCATGACCAATACGCGTACGACAGACGTCGAAGCAACGGTCAATCAAATCAAGGCGCTGGAACGCGTTGGCGCTGATATCGTCCGTGTATCCGTACCGACGATGGACGCGGCAGAAGCGTTCAAACTCATCAAACAGCAGGTTAACGTGCCGCTGGTGGCTGACATCCACTTCGACTATCGCATTGCGCTGAAAGTAGCGGAATACGGCGTCGATTGTCTGCGTATTAACCCTGGCAATATCGGTAATGAAGAGCGTATTCGCATGGTGGTTGACTGTGCGCGCGATAAAAACATTCCGATCCGTATTGGCGTTAACGCCGGATCGCTGGAAAAAGATCTGCAAGAAAAGTATGGCGAACCGACGCCGCAGGCGTTGCTGGAATCTGCCATGCGTCATGTTGATCATCTCGATCGCCTGAACTTCGATCAGTTCAAAGTCAGCGTGAAAGCGTCTGACGTCTTCCTCGCTGTTGAGTCTTATCGTTTGCTGGCAAAACAGATCGATCAGCCGTTGCATCTGGGGATCACCGAAGCCGGTGGTGCGCGCAGCGGGGCAGTAAAATCCGCCATTGGTTTAGGTCTGCTGCTGTCTGAAGGCATCGGCGACACGCTGCGCGTATCGCTGGCGGCCGATCCGGTCGAAGAGATCAAAGTCGGTTTCGATATTTTGAAATCGCTGCGTATCCGTTCGCGAGGGATCAACTTCATCGCCTGCCCGACCTGTTCGCGTCAGGAATTTGATGTTATCGGTACGGTTAACGCGCTGGAGCAACGCCTGGAAGATATCATCACTCCGATGGACGTTTCGATTATCGGCTGCGTGGTGAATGGCCCAGGTGAGGCGCTGGTTTCTACACTCGGCGTCACCGGCGGCAACAAGAAAAGCGGCCTCTATGAAGATGGCGTGCGCAAAGACCGTCTGGACAACAACGATATGATCGACCAGCTGGAAGCACGCATTCGTGCGAAAGCCAGTCAGCTGGACGAAGCGCGTCGAATTGACGTTCAGCAGGTTGAAAAATAA", - "dna_sequence_length": 1119, - "functions": [ - "1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase" - ], - "id": "CDS_2497", - "location": [ - [ - "NC_000913", - 2641804, - "-", - 1119 - ] - ], - "md5": "768380c616e273539ffd9d98f74212b3", - "parent_gene": "", - "protein_md5": "8fdfc5b772bb357d9e57c9710e060f7e", - "protein_translation": "MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEATVNQIKALERVGADIVRVSVPTMDAAEAFKLIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLESAMRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAVKSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGVRKDRLDNNDMIDQLEARIRAKASQLDEARRIDVQQVEK", - "protein_translation_length": 372, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27434" - ], - [ - "gene_synonym", - "yfgA" - ], - [ - "gene_synonym", - "GeneID:946992" - ], - [ - "gene_synonym", - "NP_417011.1" - ], - [ - "gene_synonym", - "b2516" - ], - [ - "gene_synonym", - "ECK2512" - ], - [ - "gene_synonym", - "rodZ" - ], - [ - "gene_synonym", - "ASAP:ABE-0008283" - ], - [ - "gene_synonym", - "JW2500" - ], - [ - "gene_synonym", - "GI:16130441" - ], - [ - "gene_synonym", - "EcoGene:EG10015" - ] - ], - "dna_sequence": "ATGAATACTGAAGCCACGCACGACCAAAATGAAGCACTTACTACCGGCGCTCGCCTGCGTAATGCTCGCGAACAACTAGGACTTAGTCAGCAGGCCGTTGCCGAGCGACTTTGCCTGAAGGTTTCCACGGTACGCGACATTGAAGAAGATAAGGCACCCGCCGATCTTGCTTCAACATTCCTGCGCGGATATATCCGCTCTTATGCGCGTCTGGTACATATTCCAGAAGAAGAACTGCTGCCAGGGCTGGAAAAGCAGGCTCCACTTCGGGCTGCAAAAGTTGCGCCGATGCAGAGTTTTTCCCTCGGTAAACGCCGCAAAAAACGCGACGGCTGGCTGATGACCTTCACTTGGCTGGTGTTGTTTGTGGTTATCGGCCTGAGCGGTGCCTGGTGGTGGCAAGACCGCAAAGCTCAGCAGGAAGAGATCACCACTATGGCCGATCAATCTTCGGCGGAACTGAGCAGTAATAGCGAGCAGGGGCAGAGTGTTCCATTAAATACGTCGACAACTACAGACCCGGCTACAACGTCCACGCCGCCAGCGTCTGTGGATACTACCGCAACCAACACGCAAACACCTGCCGTAACTGCGCCAGCACCAGCTGTTGATCCGCAACAGAATGCGGTTGTTTCGCCTTCGCAGGCAAATGTTGATACCGCCGCGACCCCGGCACCAACGGCAGCAACAACGCCAGATGGTGCTGCGCCGTTGCCAACCGATCAGGCTGGCGTGACCACGCCGGTGGCTGATCCGAATGCGCTGGTGATGAACTTTACTGCCGATTGCTGGCTGGAGGTCACTGATGCTACCGGTAAAAAATTGTTTAGCGGTATGCAGCGTAAAGACGGTAATTTGAACTTAACCGGCCAGGCACCGTACAAACTGAAAATTGGTGCGCCAGCCGCAGTACAGATCCAGTATCAAGGGAAACCTGTCGATCTGAGTCGTTTTATCAGAACTAACCAGGTTGCGCGTCTGACCCTCAATGCCGAACAATCACCGGCGCAGTAA", - "dna_sequence_length": 1014, - "functions": [ - "MreB assembly cytoskeletal protein" - ], - "id": "CDS_2498", - "location": [ - [ - "NC_000913", - 2642844, - "-", - 1014 - ] - ], - "md5": "3dc3c82f5ae639f32ab96786c3d6536a", - "parent_gene": "", - "protein_md5": "b3ca4aeb5ffb2a35824bb6b9369f8a0c", - "protein_translation": "MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLPGLEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQSPAQ", - "protein_translation_length": 337, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rlmN" - ], - [ - "gene_synonym", - "GeneID:946249" - ], - [ - "gene_synonym", - "yfgB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36979" - ], - [ - "gene_synonym", - "EcoGene:EG12401" - ], - [ - "gene_synonym", - "b2517" - ], - [ - "gene_synonym", - "ECK2513" - ], - [ - "gene_synonym", - "ASAP:ABE-0008287" - ], - [ - "gene_synonym", - "JW2501" - ], - [ - "gene_synonym", - "NP_417012.1" - ], - [ - "gene_synonym", - "GI:16130442" - ] - ], - "dna_sequence": "ATGTCTGAACAATTAGTCACACCTGAAAACGTCACCACGAAAGATGGAAAAATCAACCTGCTGGATCTCAACCGTCAGCAGATGCGGGAGTTTTTTAAAGATTTAGGTGAAAAACCCTTCCGCGCCGATCAGGTGATGAAGTGGATGTATCACTATTGCTGCGACAACTTTGATGAGATGACCGACATCAACAAAGTGTTGCGCGGCAAACTGAAAGAGGTGGCGGAAATCCGCGCACCGGAAGTGGTTGAAGAACAGCGTTCATCTGACGGCACCATTAAATGGGCGATCGCCGTTGGCGATCAGCGCGTCGAAACGGTGTATATCCCGGAAGACGACCGTGCCACGCTCTGCGTCTCTTCGCAGGTGGGGTGTGCGCTGGAGTGTAAATTCTGTTCCACCGCCCAGCAGGGCTTTAACCGCAACCTGCGGGTGTCGGAAATTATCGGCCAGGTGTGGCGTGCGGCGAAAATCGTCGGCGCAGCAAAAGTCACCGGTCAGCGTCCGATCACTAACGTAGTGATGATGGGCATGGGCGAGCCGCTGCTCAACCTGAACAACGTCGTTCCGGCGATGGAAATCATGCTTGATGATTTCGGTTTTGGCCTGTCTAAACGTCGCGTCACGCTTTCCACTTCCGGTGTAGTTCCGGCGCTGGATAAACTGGGCGATATGATCGACGTTGCACTGGCAATTTCCCTGCACGCGCCGAACGACGAAATTCGTGACGAAATTGTGCCGATCAACAAAAAGTACAATATCGAAACGTTCCTTGCTGCGGTGCGCCGTTATCTGGAGAAATCCAACGCCAATCAGGGCCGAGTCACTATTGAATACGTGATGCTTGACCACGTTAACGACGGCACTGAACACGCGCACCAACTGGCGGAACTGCTGAAAGATACGCCGTGTAAGATCAACCTGATCCCGTGGAACCCGTTCCCGGGTGCGCCGTATGGACGCAGCTCGAACAGCCGTATCGACCGTTTCTCAAAAGTGCTGATGAGCTACGGTTTCACCACTATTGTGCGTAAAACTCGTGGTGATGATATCGATGCTGCCTGTGGTCAGTTGGCGGGCGATGTTATCGACCGTACGAAACGTACCCTGCGTAAACGGATGCAGGGTGAAGCCATCGACATTAAAGCGGTCTGA", 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- "gene_synonym", - "UniProtKB/Swiss-Prot:P0A763" - ], - [ - "gene_synonym", - "GeneID:945611" - ], - [ - "gene_synonym", - "ASAP:ABE-0008291" - ], - [ - "gene_synonym", - "NP_417013.1" - ], - [ - "gene_synonym", - "JW2502" - ], - [ - "gene_synonym", - "GI:16130443" - ] - ], - "dna_sequence": "ATGGCTATTGAACGTACTTTTTCCATCATCAAACCGAACGCGGTAGCAAAAAACGTCATTGGTAATATCTTTGCGCGCTTTGAAGCTGCAGGGTTCAAAATTGTTGGCACCAAAATGCTGCACCTGACCGTTGAACAGGCACGTGGCTTTTATGCTGAACACGATGGAAAACCGTTCTTTGATGGTCTGGTTGAATTCATGACCTCTGGCCCGATCGTGGTTTCCGTGCTGGAAGGTGAAAACGCCGTTCAGCGTCACCGCGATCTGCTGGGCGCGACCAATCCGGCAAACGCACTGGCTGGTACTCTGCGCGCTGATTACGCTGACAGCCTGACCGAAAACGGTACCCACGGTTCTGATTCCGTCGAATCTGCCGCTCGCGAAATCGCTTATTTCTTTGGCGAAGGCGAAGTGTGCCCGCGCACCCGTTAA", - "dna_sequence_length": 432, - "functions": [ - "multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase" - ], - "id": "CDS_2500", - "location": [ - [ - "NC_000913", - 2644864, - "-", - 432 - ] - ], - "md5": "d0b63f3eea92cb2cbf225fa0513fd6be", - "parent_gene": "", - "protein_md5": "54fef7552ef7599096562610b89c5009", - "protein_translation": "MAIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGTLRADYADSLTENGTHGSDSVESAAREIAYFFGEGEVCPRTR", - "protein_translation_length": 143, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2519" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76577" - ], - [ - "gene_synonym", - "ECK2515" - ], - [ - "gene_synonym", - "yfgN" - ], - [ - "gene_synonym", - "NP_417014.1" - ], - [ - "gene_synonym", - "GeneID:947152" - ], - [ - "gene_synonym", - "pbpC" - ], - [ - "gene_synonym", - "GI:16130444" - ], - [ - "gene_synonym", - "EcoGene:EG14210" - ], - [ - "gene_synonym", - "JW2503" - ], - [ - "gene_synonym", - "ASAP:ABE-0008294" - ] - ], - "dna_sequence": "ATGCCTCGCTTGTTAACCAAACGCGGCTGCTGGATAACGTTGGCAGCCGCGCCCTTTCTCCTTTTTCTTGCAGCGTGGGGAGCAGATAAACTCTGGCCTCTACCGCTGCATGAAGTCAATCCCGCACGAGTGGTCGTGGCGCAGGATGGTACGCCGCTCTGGCGCTTCGCCGATGCTGACGGCATCTGGCGTTATCCGGTAACAATCGAAGATGTTTCTCCACGTTACCTTGAAGCGCTGATCAATTATGAAGATCGCTGGTTCTGGAAGCATCCGGGGGTGAATCCATTCTCGGTGGCGCGCGCAGCATGGCAAGATCTCACTTCGGGACGGGTTATTTCCGGTGGCAGCACGCTCACTATGCAGGTTGCTCGTCTGCTTGATCCTCACCCCAAAACATTTGGCGGCAAAATTCGCCAGCTCTGGCGCGCGTTGCAACTGGAATGGCATCTGTCTAAGCGTGAAATTCTGACCTTGTATCTTAACCGCGCTCCGTTTGGCGGTACGTTGCAGGGGATCGGTGCGGCAAGTTGGGCTTATCTCGGAAAATCGCCTGCGAATTTAAGCTATTCCGAGGCGGCAATGCTGGCGGTTTTGCCGCAAGCGCCCAGCCGTCTTCGCCCGGATCGTTGGCCGGAGCGTGCCGAAGCCGCGCGTAATAAAGTGCTCGAACGGATGGCCGTGCAAGGTGTGTGGTCCCGTGAGCAGGTAAAAGAGTCAAGGGAAGAACCCATCTGGCTGGCCCCCCGACAAATGCCGCAACTGGCACCGCTGTTTTCGCGCATGATGCTCGGTAAAAGCAAAAGCGACAAAATCACTACTACGTTGGATGCCGGTCTTCAACGACGTCTGGAAGAACTGGCGCAAAACTGGAAAGGGCGGTTGCCACCGCGCAGCTCACTGGCGATGATCGTGGTTGATCATACCGATATGCGTGTTCGCGGCTGGGTGGGATCGGTTGATCTCAACGATGATTCACGCTTTGGTCATGTTGATATGGTCAATTCGATCCGATCGCCAGGATCAGTGCTCAAACCGTTTGTTTATGGTCTGGCGCTGGATGAAGGCTTGATCCACCCGGCATCACTGCTGCAAGACGTCCCCCGGCGCACCGGTGATTATCGACCAGGTAACTTTGATAGCGGTTTTCATGGCCCGATCAGCATGAGCGAGGCGCTGGTGCGCTCGCTGAACTTACCTGCTGTGCAGGTGCTGGAAGCCTATGGACCGAAACGGTTTGCGGCAAAGTTACGCAATGTTGGATTGCCGTTATATTTGCCCAACGGTGCTGCGCCGAATCTTTCACTCATTCTCGGCGGCGCTGGTGCAAAACTGGAAGATATGGCGGCAGCGTATACCGCGTTTGCTCGCCACGGCAAGGCAGGCAAATTGCGCTTACAGCCTGACGATCCGCTGCTTGAACGGCCTTTAATGTCGTCGGGGGCGGCGTGGATCATTCGCCGGATTATGGCTGATGAAGCGCAACCCTTGCCGGATAGTGCCTTGCCGCGCGTCGCCCCACTGGCATGGAAAACGGGCACCAGCTATGGCTATCGTGACGCCTGGGCGATTGGGGTTAACGCTCGCTATGTCATTGGGATCTGGACTGGCAGACCGGACGGCACGCCCGTTGTTGGTCAGTTTGGCTTTGCCAGTGCCGTACCATTGTTGAATCAGGTCAATAATATCTTACTGTCGCGCAGTGCGAATCTGCCGGAAGACCCGCGCCCGAACTCAGTCACTCGTGGCGTTATCTGCTGGCCGGGCGGACAGTCTTTGCCGGAAGGTGACGGTAACTGTCGCCGCCGCCTGGCAACCTGGCTGCTGGACGGGAGTCAGCCGCCAACTCTATTACTGCCGGAGCAGGAAGGCATTAATGGCATTCGTTTCCCCATCTGGCTGGATGAAAATGGCAAACGTGTTGCCGCTGATTGCCCGCAAGCGCGACAAGAAATGATAAATGTCTGGCCGCTACCGCTGGAACCCTGGCTGCCCGCATCAGAACGTCGCGCTGTGCGCTTACCACCGGCCTCGACAAGTTGCCCGCCATACGGTCACGATGCCCAGCTCCCGCTGCAGCTGACAGGCGTTCGCGATGGCGCGATTATTAAACGTTTACCGGGCGCAGCGGAAGCGACTTTGCCGTTGCAATCAAGTGGAGGGGCAGGTGAACGCTGGTGGTTTCTGAATGGCGAACCGTTAACTGAACGCGGGCGCAACGTGACCCTGCATTTGACGGATAAAGGTGATTATCAATTGCTGGTGATGGATGACGTGGGGCAAATCGCGACAGTGAAATTTGTCATGCAATAG", - "dna_sequence_length": 2313, - "functions": [ - "penicillin-insensitive murein repair transglycosylase", - "inactive transpeptidase domain protein" - ], - "id": "CDS_2501", - "location": [ - [ - "NC_000913", - 2647325, - "-", - 2313 - ] - ], - "md5": "c65408a1841a7a5a7530c2befb60882a", - "parent_gene": "", - "protein_md5": "6fc8f588db9dc8f28cd8aa8f6e5614cd", - "protein_translation": "MPRLLTKRGCWITLAAAPFLLFLAAWGADKLWPLPLHEVNPARVVVAQDGTPLWRFADADGIWRYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVARAAWQDLTSGRVISGGSTLTMQVARLLDPHPKTFGGKIRQLWRALQLEWHLSKREILTLYLNRAPFGGTLQGIGAASWAYLGKSPANLSYSEAAMLAVLPQAPSRLRPDRWPERAEAARNKVLERMAVQGVWSREQVKESREEPIWLAPRQMPQLAPLFSRMMLGKSKSDKITTTLDAGLQRRLEELAQNWKGRLPPRSSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGHVDMVNSIRSPGSVLKPFVYGLALDEGLIHPASLLQDVPRRTGDYRPGNFDSGFHGPISMSEALVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAKLEDMAAAYTAFARHGKAGKLRLQPDDPLLERPLMSSGAAWIIRRIMADEAQPLPDSALPRVAPLAWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTPVVGQFGFASAVPLLNQVNNILLSRSANLPEDPRPNSVTRGVICWPGGQSLPEGDGNCRRRLATWLLDGSQPPTLLLPEQEGINGIRFPIWLDENGKRVAADCPQARQEMINVWPLPLEPWLPASERRAVRLPPASTSCPPYGHDAQLPLQLTGVRDGAIIKRLPGAAEATLPLQSSGGAGERWWFLNGEPLTERGRNVTLHLTDKGDYQLLVMDDVGQIATVKFVMQ", - "protein_translation_length": 770, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfhM" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76578" - ], - [ - "gene_synonym", - "ECK2516" - ], - [ - "gene_synonym", - "b2520" - ], - [ - "gene_synonym", - "NP_417015.1" - ], - [ - "gene_synonym", - "GeneID:947302" - ], - [ - "gene_synonym", - "EcoGene:EG13394" - ], - [ - "gene_synonym", - "GI:16130445" - ], - [ - "gene_synonym", - "JW2504" - ], - [ - "gene_synonym", - "ASAP:ABE-0008296" - ] - ], - "dna_sequence": "ATGAAAAAGTTACGCGTAGCCGCCTGCATGCTAATGCTGGCGCTGGCAGGGTGCGACAACAACGATAACGCGCCAACAGCGGTGAAAAAAGATGCGCCTTCTGAAGTTACTAAAGCGGCCTCTTCAGAAAACGCGAGTTCAGCAAAACTCTCCGTGCCGGAGAGACAAAAACTGGCCCAACAGAGTGCCGGTAAGGTGCTGACATTGCTGGATCTCTCTGAAGTCCAACTTGATGGTGCAGCCACGCTGGTGCTGACGTTCTCCATCCCTCTCGACCCGGATCAGGATTTCTCACGCGTTATTCATGTCGTCGATAAAAAAAGCGGCAAAGTGGATGGTGCCTGGGAGCTGTCAGATAATCTTAAAGAGTTACGTTTACGCCACCTCGAACCGAAACGTGATTTGATCGTTACTATTGGCAAGGAGGTCAAAGCACTCAACAACGCAACCTTCAGTAAAGATTACGAAAAAACTATAACTACCCGCGACATCCAACCCAGCGTCGGTTTTGCCAGCCGTGGTTCGCTGCTGCCTGGCAAAGTCGTTGAAGGGCTGCCGGTAATGGCGCTCAACGTTAATAATGTCGATGTTAACTTCTTCCGCGTTAAGCCAGAATCTCTGCCAGCATTCATTAGCCAATGGGAATACCGCAATTCGCTGGCGAACTGGCAGTCAGACAAACTGCTGCAGATGGCGGATCTGGTCTACACCGGACGGTTTGATCTCAATCCTGCGCGTAACACCCGTGAAAAATTATTGCTGCCGCTGGGCGATATCAAACCGCTTCAGCAGGCGGGCGTGTATCTGGCTGTGATGAATCAGGCTGGACGTTACGATTACAGTAATCCCGCGACGCTGTTTACGTTAAGTGATATCGGCGTTTCAGCTCACCGTTATCACAATCGTCTGGATATCTTTACCCAAAGTCTGGAAAACGGCGCGGCCCAGCAAGGAATTGAAGTCTCTTTATTAAATGAGAAAGGGCAGACTCTGACTCAGGCAACCAGTGACGCTCAGGGGCATGTGCAGCTGGAAAATGATAAAAACGCGGCATTACTGTTGGCGCGTAAAGACGGTCAGACAACGCTACTCGATTTAAAACTTCCGGCGCTGGACTTAGCAGAATTTAACATTGCTGGCGCGCCAGGCTATAGCAAACAGTTTTTCATGTTTGGCCCACGCGATCTTTATCGCCCAGGTGAAACGGTAATCCTCAATGGTTTGCTGCGTGATGCAGACGGTAAAGCGTTGCCCAATCAACCCATCAAGTTAGACGTGATTAAACCCGATGGGCAGGTACTCAGGAGCGTCGTTAGTCAGCCGGAGAATGGCCTCTACCACTTTACCTGGCCACTCGATAGCAATGCGGCAACCGGTATGTGGCATATTCGCGCTAACACGGGCGATAATCAGTATCGGATGTGGGATTTCCACGTCGAAGATTTTATGCCAGAGCGCATGGCGCTGAATCTGACCGGTGAGAAAACCCCGCTAACGCCGAAAGATGAAGTGAAATTCTCCGTGGTGGGGTACTACCTGTATGGTGCACCTGCTAATGGTAATACTTTGCAAGGGCAACTTTTCCTGCGCCCACTGCGTGAAGCTGTGTCAGCCTTACCTGGTTTTGAATTCGGCGATATAGCTGCCGAAAATCTTTCCCGCACGCTGGATGAAGTTCAGTTGACGCTGGATGATAAAGGGCGCGGCGAAGTTTCTACAGAAAGCCAGTGGAAGGAAACGCATTCCCCATTACAGGTTATTTTCCAGGGTAGTTTGCTGGAATCGGGCGGTCGCCCGGTGACGCGCCGCGCTGAGCAGGCTATCTGGCCTGCCGATGCATTGCCGGGGATCCGTCCGCAGTTCGCCTCGAAATCGGTTTACGATTATCGTACTGACAGCACGGTGAAACAGCCCATTGTTGATGAAGGCAGTAACGCCGCTTTTGACATCGTTTATAGCGATGCGCAAGGCGTGAAAAAAGCCGTGTCGGGCTTGCAGGTGCGCCTGATTCGCGAACGCCGCGATTACTACTGGAACTGGTCAGAAGATGAAGGCTGGCAGTCACAGTTTGATCAAAAAGATCTGATCGAAAATGAACAAACTCTGGATCTGAAAGCGGACGAAACCGGCAAGGTCAGTTTTCCGGTAGAGTGGGGCGCTTATCGTCTGGAAGTCAAAGCGCCGAATGAAGCGGTCAGTAGTGTTCGTTTCTGGGCTGGCTATAGCTGGCAGGACAACAGCGACGGTAGCGGCGCAGTGCGACCCGACCGTGTCACGCTGAAACTGGATAAAGCCAGTTATCGCCCTGGCGACACCATTAAGTTGCATATCGCCGCGCCAACGGCGGGTAAAGGTTATGCGATGGTCGAGTCCAGTGAAGGGCCGCTGTGGTGGCAAGAGATTGATGTTCGGGCTCAAGGGCTGGATCTGACGATTCCGGTCGATAAAACCTGGAATCGTCATGATCTGTATTTAAGTACGCTGGTGGTACGTCCTGGCGATAAATCTCGCTCCGCGACGCCAAAACGCGCGGTTGGTGTGTTGCATCTGCCGCTTGGCGATGAAAACCGTCGCCTCGATCTGGCGCTGGAAACACCAGCAAAAATGCGTCCCAATCAACCATTAACCGTGAAAATTAAAGCCAGCACTAAAAATGGCGAGAAGCCTAAACAGGTGAATGTGCTGGTGTCTGCCGTTGATAGTGGTGTGCTGAATATTACTGACTACGTCACGCCAGATCCGTGGCAGGCGTTCTTTGGTCAGAAACGCTATGGCGCAGACATTTACGATATTTACGGTCAGGTTATTGAAGGTCAGGGGCGTCTGGCAGCTCTGCGTTTCGGTGGCGATGGTGATGAGCTGAAACGTGGTGGTAAACCGCCGGTCAATCACGTCAATATTGTCGTGCAGCAGGCGCTGCCGGTAACGCTCAACGAACAGGGCGAAGGCTCGGTTACACTGCCGATTGGCGATTTTAACGGTGAATTGCGCGTCATGGCGCAAGCCTGGACGGCAGATGACTTCGGTAGCAACGAAAGTAAAGTGATAGTTGCCGCACCGGTGATTGCTGAACTGAACATGCCGCGCTTTATGGCGAGTGGCGATACCTCGCGTCTGACGCTGGATATCACTAATCTTACCGATAAACCGCAAAAACTGAACGTTGCCCTGACCGCCAGTGGTTTGCTTGAACTGGTCAGCGATTCACCCGCAGCCGTTGAATTAGCGCCAGGTGTGCGTACTACGCTGTTTATCCCGGTGCGAGCATTGCCGGGTTATGGCGATGGAGAAATTCAGGCCACCATTAGCGGGTTAGCGTTACCGGGTGAAACCGTTGCCGATCAGCATAAGCAGTGGAAAATCGGCGTCCGTCCGGCGTTCCCGGCACAAACGGTTAATTACGGTACGGCGTTACAGCCTGGTGAGACATGGGCGATTCCGGCGGATGGATTGCAAAACTTCTCGCCTGTTACGCTGGAAGGGCAATTGTTGTTGAGCGGCAAACCACCGCTGAACATCGCACGTTATATCAAAGAGTTAAAAGCGTATCCGTACGGCTGTCTTGAGCAAACCGCCAGCGGCCTGTTTCCGTCACTTTATACCAACGCAGCCCAACTGCAGGCGTTGGGCATCAAAGGCGACAGTGATGAGAAACGCCGTGCATCGGTCGATATCGGCATTTCCCGTTTGCTGCAAATGCAACGTGATAACGGCGGCTTTGCGCTGTGGGATAAAAACGGTGACGAAGAGTACTGGCTGACGGCTTACGTGATGGATTTCCTGGTCCGCGCAGGCGAACAGGGTTACAGCGTGCCGACAGACGCCATTAACCGGGGTAATGAGCGTCTGCTGCGCTATTTACAAGATCCGGGCATGATGTCGATCCCGTACGCGGATAATCTCAAAGCCAGTAAATTCGCCGTACAGTCTTACGCTGCGCTGGTGTTGGCCCGTCAGCAAAAGGCTCCGCTGGGTGCGCTGCGTGAAATCTGGGAGCATCGTGCAGATGCCGCTTCTGGTTTACCGCTGCTGCAACTTGGCGTTGCGCTGAAAACCATGGGTGATGCGACGCGTGGTGAAGAAGCGATTGCGCTGGCGCTGAAAACGCCGCGTAATAGTGATGAGCGGATATGGCTGGGTGATTACGGTAGTTCACTGCGCGACAACGCGTTAATGCTCTCCTTGCTGGAAGAAAATAAACTGCTACCCGATGAGCAGTACACTTTGCTGAACACACTTTCGCAGCAGGCGTTTGGTGAACGCTGGCTATCGACGCAGGAAAGTAACGCGTTGTTCCTGGCTGCCCGTACGATTCAGGATTTACCCGGTAAATGGCAGGCGCAAACCTCTTTCTCAGCTGAGCAGCTGACAGGCGAGAAAGCGCAAAACAGCAATCTGAATAGCGATCAACTTGTCACCTTGCAGGTGAGCAACAGTGGCGATCAGCCGTTATGGTTGCGTATGGATGCCAGCGGTTATCCGCAATCCGCACCTTTACCGGCGAACAATGTGCTGCAAATCGAGCGTCATATTCTTGGTACTGATGGTAAGAGCAAATCGCTGGACTCGTTACGTAGCGGCGATCTGGTGCTGGTGTGGTTGCAGGTAAAAGCCAGTAACAGCGTGCCGGATGCGTTAGTCGTGGATCTGCTGCCTGCGGGTCTGGAACTGGAAAACCAGAATCTGGCGAACGGTAGCGCCAGCCTGGAGCAAAGTGGTGGCGAAGTGCAGAACTTACTGAACCAGATGCAGCAGGCGAGCATTAAGCACATTGAGTTCCGTGACGATCGCTTTGTGGCGGCGGTTGCCGTTGATGAATACCAACCGGTAACGCTGGTGTATCTGGCGCGGGCGGTGACGCCGGGAACGTATCAGGTACCGCAACCGATGGTGGAATCAATGTATGTTCCCCAATGGCGGGCGACCGGCGCGGCTGAAGATCTGCTGATTGTCAGACCGTAA", 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"MKKLRVAACMLMLALAGCDNNDNAPTAVKKDAPSEVTKAASSENASSAKLSVPERQKLAQQSAGKVLTLLDLSEVQLDGAATLVLTFSIPLDPDQDFSRVIHVVDKKSGKVDGAWELSDNLKELRLRHLEPKRDLIVTIGKEVKALNNATFSKDYEKTITTRDIQPSVGFASRGSLLPGKVVEGLPVMALNVNNVDVNFFRVKPESLPAFISQWEYRNSLANWQSDKLLQMADLVYTGRFDLNPARNTREKLLLPLGDIKPLQQAGVYLAVMNQAGRYDYSNPATLFTLSDIGVSAHRYHNRLDIFTQSLENGAAQQGIEVSLLNEKGQTLTQATSDAQGHVQLENDKNAALLLARKDGQTTLLDLKLPALDLAEFNIAGAPGYSKQFFMFGPRDLYRPGETVILNGLLRDADGKALPNQPIKLDVIKPDGQVLRSVVSQPENGLYHFTWPLDSNAATGMWHIRANTGDNQYRMWDFHVEDFMPERMALNLTGEKTPLTPKDEVKFSVVGYYLYGAPANGNTLQGQLFLRPLREAVSALPGFEFGDIAAENLSRTLDEVQLTLDDKGRGEVSTESQWKETHSPLQVIFQGSLLESGGRPVTRRAEQAIWPADALPGIRPQFASKSVYDYRTDSTVKQPIVDEGSNAAFDIVYSDAQGVKKAVSGLQVRLIRERRDYYWNWSEDEGWQSQFDQKDLIENEQTLDLKADETGKVSFPVEWGAYRLEVKAPNEAVSSVRFWAGYSWQDNSDGSGAVRPDRVTLKLDKASYRPGDTIKLHIAAPTAGKGYAMVESSEGPLWWQEIDVRAQGLDLTIPVDKTWNRHDLYLSTLVVRPGDKSRSATPKRAVGVLHLPLGDENRRLDLALETPAKMRPNQPLTVKIKASTKNGEKPKQVNVLVSAVDSGVLNITDYVTPDPWQAFFGQKRYGADIYDIYGQVIEGQGRLAALRFGGDGDELKRGGKPPVNHVNIVVQQALPVTLNEQGEGSVTLPIGDFNGELRVMAQAWTADDFGSNESKVIVAAPVIAELNMPRFMASGDTSRLTLDITNLTDKPQKLNVALTASGLLELVSDSPAAVELAPGVRTTLFIPVRALPGYGDGEIQATISGLALPGETVADQHKQWKIGVRPAFPAQTVNYGTALQPGETWAIPADGLQNFSPVTLEGQLLLSGKPPLNIARYIKELKAYPYGCLEQTASGLFPSLYTNAAQLQALGIKGDSDEKRRASVDIGISRLLQMQRDNGGFALWDKNGDEEYWLTAYVMDFLVRAGEQGYSVPTDAINRGNERLLRYLQDPGMMSIPYADNLKASKFAVQSYAALVLARQQKAPLGALREIWEHRADAASGLPLLQLGVALKTMGDATRGEEAIALALKTPRNSDERIWLGDYGSSLRDNALMLSLLEENKLLPDEQYTLLNTLSQQAFGERWLSTQESNALFLAARTIQDLPGKWQAQTSFSAEQLTGEKAQNSNLNSDQLVTLQVSNSGDQPLWLRMDASGYPQSAPLPANNVLQIERHILGTDGKSKSLDSLRSGDLVLVWLQVKASNSVPDALVVDLLPAGLELENQNLANGSASLEQSGGEVQNLLNQMQQASIKHIEFRDDRFVAAVAVDEYQPVTLVYLARAVTPGTYQVPQPMVESMYVPQWRATGAAEDLLIVRP", 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"ATGTCCACGACATGGTTTGTAGGAGCCGACTGGCTCGCCGAACATATTGATGACCCGGAAATTCAGATTATCGATGCCCGCATGGCGTCGCCTGGACAGGAGGATCGTAACGTTGCTCAGGAGTATCTGAATGGACATATTCCCGGCGCAGTGTTTTTTGATATCGAAGCGCTTTCTGATCACACTTCCCCGCTTCCGCACATGCTGCCGCGCCCGGAAACGTTCGCCGTGGCGATGCGTGAATTAGGCGTTAACCAGGATAAGCACCTGATTGTCTATGACGAAGGTAATCTTTTCTCAGCCCCACGAGCATGGTGGATGCTGCGCACCTTTGGTGTAGAGAAAGTGTCGATTCTGGGGGGTGGACTTGCAGGCTGGCAGCGCGATGATCTGCTGTTAGAAGAAGGTGCAGTAGAGCTGCCGGAAGGAGAGTTTAACGCCGCGTTTAATCCTGAAGCCGTGGTGAAAGTAACCGATGTATTATTGGCAAGCCATGAAAATACGGCGCAAATTATTGATGCCCGCCCGGCTGCACGTTTTAACGCAGAAGTTGATGAACCTCGCCCAGGTTTACGTCGCGGACATATTCCCGGAGCACTGAATGTTCCGTGGACGGAACTGGTGCGCGAAGGCGAACTAAAAACGACCGATGAACTGGATGCGATATTTTTTGGTCGCGGCGTCAGCTACGACAAACCAATTATCGTCAGCTGCGGCTCTGGTGTAACGGCAGCCGTGGTTTTGTTAGCACTCGCGACGCTGGATGTGCCAAACGTGAAACTGTACGACGGCGCATGGAGTGAATGGGGCGCGCGGGCAGATTTACCGGTTGAGCCAGTGAAATAA", - "dna_sequence_length": 846, - "functions": [ - "3-mercaptopyruvate sulfurtransferase" - ], - "id": "CDS_2503", - "location": [ - [ - "NC_000913", - 2652494, - "+", - 846 - ] - ], - "md5": "8762d54b225be1872937eced05cd939d", - "parent_gene": "", - "protein_md5": "0749bf7dd4e705faeea83da9bb5b3937", - "protein_translation": "MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPVK", - "protein_translation_length": 281, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946994" - ], - [ - "gene_synonym", - "EcoGene:EG11601" - ], - [ - "gene_synonym", - "ECK2519" - ], - [ - "gene_synonym", - "GI:90111452" - ], - [ - "gene_synonym", - "b2522" - ], - [ - "gene_synonym", - "JW5404" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFZ1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008301" - ], - [ - "gene_synonym", - "sseB" - ], - [ - "gene_synonym", - "NP_417017.4" - ] - ], - "dna_sequence": "ATGTCCGAAACAAAAAACGAACTTGAAGACCTGCTGGAAAAAGCAGCAACTGAACCGGCGCACCGCCCGGCCTTTTTCCGTACTCTACTGGAATCCACCGTCTGGGTGCCTGGTACGGCGGCGCAGGGCGAGGCTGTGGTTGAAGATAGCGCGCTTGATTTACAGCACTGGGAAAAAGAAGACGGCACCAGCGTCATTCCTTTTTTCACCTCGTTAGAAGCACTTCAACAGGCGGTTGAAGACGAACAGGCATTTGTCGTAATGCCCGTTCGCACGCTGTTTGAGATGACACTTGGCGAAACGCTCTTCCTTAATGCCAAACTGCCAACCGGTAAAGAATTTATGCCGCGTGAAATCAGTTTGTTGATTGGTGAAGAGGGAAATCCGCTGAGCAGCCAGGAAATCCTGGAAGGCGGTGAATCGCTGATATTATCGGAAGTCGCAGAGCCGCCAGCACAAATGATTGATTCACTCACCACCTTATTTAAAACCATTAAGCCGGTGAAGCGTGCTTTTATTTGTTCAATTAAAGAGAACGAAGAGGCACAGCCTAATTTACTTATTGGCATTGAAGCCGATGGTGATATCGAAGAAATTATTCAGGCGACGGGAAGTGTAGCGACCGATACATTACCTGGCGATGAACCAATCGATATTTGTCAGGTGAAAAAAGGGGAAAAAGGAATTAGCCACTTTATTACCGAACATATTGCGCCATTCTATGAACGTCGCTGGGGTGGTTTTTTGCGTGACTTTAAACAGAATCGGATAATCTAA", - "dna_sequence_length": 777, - "functions": [ - "rhodanase-like enzyme, sulfur transfer from thiosulfate" - ], - "id": "CDS_2504", - "location": [ - [ - "NC_000913", - 2654933, - "-", - 777 - ] - ], - "md5": "7ab6d99177efdd4edf9ba77e1a622fe7", - "parent_gene": "", - "protein_md5": "3cd421e54b68db44f5c854e1255dda60", - "protein_translation": "MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGEAVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETLFLNAKLPTGKEFMPREISLLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTTLFKTIKPVKRAFICSIKENEEAQPNLLIGIEADGDIEEIIQATGSVATDTLPGDEPIDICQVKKGEKGISHFITEHIAPFYERRWGGFLRDFKQNRII", - "protein_translation_length": 258, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfhI" - ], - [ - "gene_synonym", - "GI:90111453" - ], - [ - "gene_synonym", - "ECK2520" - ], - [ - "gene_synonym", - "pepB" - ], - [ - "gene_synonym", - "b2523" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37095" - ], - [ - "gene_synonym", - "ASAP:ABE-0008305" - ], - [ - "gene_synonym", - "NP_417018.4" - ], - [ - "gene_synonym", - "EcoGene:EG12310" - ], - [ - "gene_synonym", - "GeneID:948766" - ], - [ - "gene_synonym", - "JW2507" - ] - ], - "dna_sequence": "ATGACAGAAGCGATGAAGATTACCCTCTCTACCCAACCTGCCGACGCGCGCTGGGGAGAAAAAGCAACTTACAGCATTAATAATGACGGCATTACCCTGCATTTGAACGGGGCAGACGATCTGGGGCTGATCCAGCGTGCGGCGCGCAAGATTGACGGTCTGGGCATCAAGCATGTTCAGTTAAGCGGTGAAGGCTGGGATGCGGATCGCTGCTGGGCATTCTGGCAAGGTTACAAAGCCCCGAAAGGCACGCGTAAAGTGGTGTGGCCGGATCTGGACGATGCCCAGCGCCAGGAACTGGATAACCGCCTGATGATCATCGACTGGGTGCGTGACACCATCAACGCACCGGCAGAAGAATTGGGACCATCGCAACTGGCACAGCGTGCTGTTGATCTGATCAGCAACGTCGCGGGCGATCGTGTGACTTATCGGATCACCAAAGGCGAAGATCTGCGTGAGCAAGGTTATATGGGGCTGCACACAGTCGGACGCGGTTCAGAACGTTCTCCGGTATTGCTGGCGCTGGATTACAACCCAACTGGCGATAAAGAAGCGCCAGTGTACGCGTGCCTGGTAGGTAAAGGTATCACTTTTGACTCCGGCGGCTACAGCATCAAACAGACTGCGTTTATGGACTCGATGAAGTCGGACATGGGCGGCGCGGCAACGGTTACCGGGGCGCTGGCATTTGCCATTACGCGCGGACTGAACAAGCGCGTGAAGCTGTTCCTCTGCTGTGCGGATAACCTGATTAGCGGCAATGCGTTCAAGCTGGGCGATATCATCACCTATCGCAACGGTAAAAAAGTTGAAGTGATGAACACTGATGCCGAAGGGCGTCTGGTGCTTGCCGATGGTCTGATTGATGCCAGTGCGCAGAAACCGGAAATGATCATTGATGCGGCGACCCTCACCGGGGCGGCGAAAACTGCGCTGGGTAATGATTATCACGCGCTGTTCAGTTTTGACGATGCGCTGGCCGGTCGCTTGCTGGCGAGTGCCGCGCAGGAGAACGAACCGTTCTGGCGTCTGCCGCTGGCGGAGTTCCACCGCAGCCAGCTGCCGTCTAACTTTGCCGAACTGAACAATACCGGAAGCGCGGCGTATCCGGCAGGCGCGAGCACGGCGGCGGGCTTCCTGTCGCACTTTGTTGAGAACTATCAGCAAGGCTGGCTGCATATCGACTGCTCGGCGACTTACCGTAAAGCGCCGGTTGAACAGTGGTCTGCGGGCGCTACGGGACTTGGTGTGCGCACGATAGCTAATCTGTTAACGGCGTAA", 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"iscX" - ], - [ - "gene_synonym", - "JW2508" - ], - [ - "gene_synonym", - "NP_417019.1" - ], - [ - "gene_synonym", - "GI:16130449" - ], - [ - "gene_synonym", - "EcoGene:EG12311" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C0L9" - ], - [ - "gene_synonym", - "ASAP:ABE-0008309" - ] - ], - "dna_sequence": "ATGGGACTTAAGTGGACCGATAGCCGCGAAATTGGCGAAGCACTGTACGATGCGTATCCCGATCTTGATCCGAAAACGGTTCGATTCACCGATATGCATCAGTGGATTTGCGATCTGGAAGATTTCGACGACGACCCGCAGGCATCCAACGAGAAAATCCTCGAAGCGATTTTGTTAGTCTGGCTGGACGAGGCCGAATAA", - "dna_sequence_length": 201, - "functions": [ - "Fe(2+) donor and activity modulator for cysteine desulfurase" - ], - "id": "CDS_2506", - "location": [ - [ - "NC_000913", - 2656736, - "-", - 201 - ] - ], - "md5": "1b29a55fcf1c6b3e6cb87639ef9d0a06", - "parent_gene": "", - "protein_md5": "e4776e4a90b74421af46968294e1b9ec", - "protein_translation": "MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDDDPQASNEKILEAILLVWLDEAE", - "protein_translation_length": 66, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2522" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9R4" - ], - [ - "gene_synonym", - "b2525" - ], - [ - "gene_synonym", - "NP_417020.1" - ], - [ - "gene_synonym", - "JW2509" - ], - [ - "gene_synonym", - "ASAP:ABE-0008311" - ], - [ - "gene_synonym", - "GeneID:947160" - ], - [ - "gene_synonym", - "fdx" - ], - [ - "gene_synonym", - "EcoGene:EG11328" - ], - [ - "gene_synonym", - "GI:16130450" - ] - ], - "dna_sequence": "ATGCCAAAGATTGTTATTTTGCCTCATCAGGATCTCTGCCCTGATGGCGCTGTTCTGGAAGCTAATAGCGGTGAAACCATTCTCGACGCAGCTCTGCGTAACGGTATCGAGATTGAACACGCCTGTGAAAAATCCTGTGCTTGCACCACCTGCCACTGCATCGTTCGTGAAGGTTTTGACTCACTGCCGGAAAGCTCAGAGCAGGAAGACGACATGCTGGACAAAGCCTGGGGACTGGAGCCGGAAAGCCGTTTAAGCTGCCAGGCGCGCGTTACCGACGAAGATTTAGTAGTCGAAATCCCGCGTTACACTATCAACCATGCGCGTGAGCATTAA", - "dna_sequence_length": 336, - "functions": [ - "[2Fe-2S] ferredoxin" - ], - "id": "CDS_2507", - "location": [ - [ - "NC_000913", - 2657083, - "-", - 336 - ] - ], - "md5": "dcb460844b7d99123d16d2b9e1bb272e", - "parent_gene": "", - "protein_md5": "65886732974b5f7a601190682a3b3ef5", - "protein_translation": "MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPRYTINHAREH", - "protein_translation_length": 111, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hsc" - ], - [ - "gene_synonym", - "NP_417021.1" - ], - [ - "gene_synonym", - "hscA" - ], - [ - "gene_synonym", - "JW2510" - ], - [ - "gene_synonym", - "b2526" - ], - [ - "gene_synonym", - "ECK2523" - ], - [ - "gene_synonym", - "EcoGene:EG12130" - ], - [ - "gene_synonym", - "ASAP:ABE-0008315" - ], - [ - "gene_synonym", - "GeneID:944885" - ], - [ - "gene_synonym", - "GI:16130451" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6Z1" - ] - ], - "dna_sequence": "ATGGCCTTATTACAAATTAGTGAACCTGGTTTGAGTGCTGCGCCGCATCAGCGTCGTCTGGCGGCCGGTATTGACCTGGGCACAACCAACTCGCTGGTGGCGACAGTGCGCAGCGGTCAGGCCGAAACGTTAGCCGATCATGAAGGCCGTCACCTGCTGCCATCTGTTGTTCACTATCAACAGCAAGGGCATTCGGTGGGTTATGACGCGCGTACTAATGCAGCGCTCGATACCGCCAACACAATTAGTTCTGTTAAACGCCTGATGGGACGCTCGCTGGCTGATATCCAGCAACGCTATCCGCATCTGCCTTATCAATTCCAGGCCAGCGAAAACGGCCTGCCGATGATTGAAACGGCGGCGGGGCTGCTGAACCCGGTGCGCGTTTCTGCGGACATCCTCAAAGCACTGGCGGCGCGGGCAACTGAAGCCCTGGCAGGCGAGCTGGATGGTGTAGTTATCACCGTTCCGGCGTACTTTGACGATGCCCAGCGTCAGGGCACCAAAGACGCGGCGCGTCTGGCGGGCCTTCACGTCCTGCGCTTACTTAACGAACCGACCGCTGCGGCTATCGCCTACGGGCTGGATTCCGGTCAGGAAGGCGTGATCGCCGTTTATGACCTCGGTGGCGGGACGTTTGATATTTCCATTCTGCGCTTAAGTCGCGGCGTGTTTGAAGTGCTGGCAACCGGCGGTGATTCCGCGCTCGGCGGCGATGATTTCGACCATCTGCTGGCGGATTACATTCGCGAGCAGGCGGGCATTCCTGATCGTAGCGATAACCGCGTTCAGCGTGAACTGCTGGATGCCGCCATTGCAGCCAAAATCGCGCTGAGCGATGCGGACTCCGTGACCGTTAACGTTGCGGGCTGGCAGGGCGAAATCAGCCGTGAACAATTCAATGAACTGATCGCGCCACTGGTAAAACGAACCTTACTGGCTTGTCGTCGCGCGCTGAAAGACGCGGGTGTAGAAGCTGATGAAGTGCTGGAAGTGGTGATGGTGGGCGGTTCTACTCGCGTGCCGCTGGTGCGTGAACGGGTAGGCGAATTTTTCGGTCGTCCACCGCTGACTTCCATCGACCCGGATAAAGTCGTCGCTATTGGCGCGGCGATTCAGGCGGATATTCTGGTGGGTAACAAGCCAGACAGCGAAATGCTGTTGCTTGATGTGATCCCACTGTCGCTGGGCCTCGAAACGATGGGCGGCCTGGTGGAGAAAGTGATTCCGCGTAATACCACTATTCCGGTGGCCCGCGCTCAGGATTTCACCACCTTTAAAGATGGTCAGACGGCGATGTCTATCCATGTAATGCAGGGTGAGCGCGAACTGGTGCAGGACTGCCGCTCACTGGCGCGTTTTGCGCTGCGTGGTATTCCGGCGCTACCGGCTGGCGGTGCGCATATTCGCGTGACGTTCCAGGTCGATGCCGACGGTCTTTTGAGCGTGACGGCGATGGAGAAATCCACCGGCGTTGAGGCGTCTATTCAGGTCAAACCGTCTTACGGTCTGACCGATAGCGAAATCGCTTCGATGATCAAAGACTCAATGAGCTATGCCGAGCAGGACGTAAAAGCCCGAATGCTGGCAGAACAAAAAGTAGAAGCGGCGCGTGTGCTGGAAAGTCTGCACGGCGCGCTGGCTGCTGATGCCGCGCTGTTAAGCGCCGCAGAACGTCAGGTCATTGACGATGCTGCCGCTCACCTGAGTGAAGTGGCGCAGGGCGATGATGTTGACGCCATCGAACAAGCGATTAAAAACGTAGACAAACAAACCCAGGATTTCGCCGCTCGCCGCATGGACCAGTCGGTTCGTCGTGCGCTGAAAGGCCATTCCGTGGACGAGGTTTAA", 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"type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hscB" - ], - [ - "gene_synonym", - "GeneID:946995" - ], - [ - "gene_synonym", - "EcoGene:EG12131" - ], - [ - "gene_synonym", - "JW2511" - ], - [ - "gene_synonym", - "b2527" - ], - [ - "gene_synonym", - "yfhE" - ], - [ - "gene_synonym", - "ECK2524" - ], - [ - "gene_synonym", - "GI:16130452" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6L9" - ], - [ - "gene_synonym", - "ASAP:ABE-0008317" - ], - [ - "gene_synonym", - "NP_417022.1" - ] - ], - "dna_sequence": "ATGGATTACTTCACCCTCTTTGGCTTGCCTGCCCGCTATCAACTCGATACCCAGGCGCTGAGCCTGCGTTTTCAGGATCTACAACGTCAGTATCATCCTGATAAATTCGCCAGCGGAAGCCAGGCGGAACAACTCGCCGCCGTACAGCAATCTGCAACCATTAACCAGGCCTGGCAAACGCTGCGTCATCCGTTAATGCGCGCGGAATATTTGCTTTCTTTGCACGGCTTTGATCTCGCCAGCGAGCAGCATACTGTGCGCGACACCGCGTTCCTGATGGAACAGTTGGAGCTGCGCGAAGAGCTGGACGAGATCGAACAGGCGAAAGATGAAGCGCGGCTGGAAAGCTTTATCAAACGTGTGAAAAAGATGTTTGATACCCGCCATCAGTTGATGGTTGAACAGTTAGACAACGAGACGTGGGACGCGGCGGCGGATACCGTGCGTAAGCTGCGTTTTCTCGATAAACTGCGAAGCAGTGCCGAACAACTCGAAGAAAAACTGCTCGATTTTTAA", - "dna_sequence_length": 516, - "functions": [ - "HscA co-chaperone, J domain-containing protein Hsc56", - "IscU-specific chaperone HscAB" - ], - "id": "CDS_2509", - "location": [ - [ - "NC_000913", - 2659467, - "-", - 516 - ] - ], - "md5": "7a2ec59668f0034a9970a4207f61b59d", - "parent_gene": "", - "protein_md5": "faf6c0209a96fd32e79e56c86c191611", - "protein_translation": "MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREELDEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKLRSSAEQLEEKLLDF", - "protein_translation_length": 171, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12132" - ], - [ - "gene_synonym", - "JW2512" - ], - [ - "gene_synonym", - "b2528" - ], - [ - "gene_synonym", - "ECK2525" - ], - [ - "gene_synonym", - "GeneID:946999" - ], - [ - "gene_synonym", - "yfhF" - ], - [ - "gene_synonym", - "NP_417023.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAC8" - ], - [ - "gene_synonym", - "iscA" - ], - [ - "gene_synonym", - "GI:16130453" - ], - [ - "gene_synonym", - "ASAP:ABE-0008319" - ] - ], - "dna_sequence": "ATGTCGATTACACTGAGCGACAGTGCAGCAGCGCGAGTAAATACCTTTCTGGCTAACCGCGGTAAAGGGTTTGGCCTGCGTCTGGGCGTGAGAACCTCCGGGTGTTCAGGTATGGCTTATGTACTGGAATTTGTTGACGAACCGACGCCGGAAGACATCGTGTTTGAAGACAAAGGCGTGAAAGTCGTGGTCGATGGCAAGAGCCTGCAATTTCTGGACGGTACGCAGCTGGACTTCGTAAAAGAAGGCCTGAACGAAGGGTTTAAATTCACCAACCCGAACGTCAAAGATGAGTGTGGTTGCGGCGAAAGCTTCCACGTTTGA", - "dna_sequence_length": 324, - "functions": [ - "FeS cluster assembly protein" - ], - "id": "CDS_2510", - "location": [ - [ - "NC_000913", - 2659886, - "-", - 324 - ] - ], - "md5": "ce692ac214833b69569144ee10b355a7", - "parent_gene": "", - "protein_md5": "e8b7d7694ac4753e5216a53d66d207fe", - "protein_translation": "MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESFHV", - "protein_translation_length": 107, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "iscU" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACD4" - ], - [ - "gene_synonym", - "NP_417024.1" - ], - [ - "gene_synonym", - "JW2513" - ], - [ - "gene_synonym", - "miaC" - ], - [ - "gene_synonym", - "b2529" - ], - [ - "gene_synonym", - "ASAP:ABE-0008321" - ], - [ - "gene_synonym", - "hsm-5" - ], - [ - "gene_synonym", - "GeneID:947002" - ], - [ - "gene_synonym", - "ECK2526" - ], - [ - "gene_synonym", - "EcoGene:EG13395" - ], - [ - "gene_synonym", - "yfhN" - ], - [ - "gene_synonym", - "GI:16130454" - ], - [ - "gene_synonym", - "nifU" - ] - ], - "dna_sequence": "ATGGCTTACAGCGAAAAAGTTATCGACCATTACGAGAATCCGCGTAACGTGGGTTCCTTTGACAACAACGACGAGAACGTCGGCAGCGGCATGGTGGGGGCACCGGCCTGTGGCGACGTGATGAAGTTGCAGATTAAAGTCAACGATGAAGGTATCATTGAAGACGCGCGTTTTAAAACTTACGGCTGCGGTTCCGCTATCGCTTCCAGCTCCCTGGTCACCGAATGGGTGAAAGGGAAGTCTCTCGACGAAGCGCAGGCGATCAAAAACACCGATATTGCTGAAGAACTTGAACTGCCGCCGGTGAAAATTCACTGTTCTATTCTGGCAGAAGACGCGATCAAAGCCGCCATTGCGGACTATAAAAGCAAACGTGAAGCAAAATAA", - "dna_sequence_length": 387, - "functions": [ - "iron-sulfur cluster assembly scaffold protein" - ], - "id": "CDS_2511", - "location": [ - [ - "NC_000913", - 2660289, - "-", - 387 - ] - ], - "md5": "ac3097ce753333f90bd05e8df220f7f4", - "parent_gene": "", - "protein_md5": "ecad0a2b61665c6066ff039f2211b326", - "protein_translation": "MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKSKREAK", - "protein_translation_length": 128, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:49176235" - ], - [ - "gene_synonym", - "YP_026169.1" - ], - [ - "gene_synonym", - "EcoGene:EG12677" - ], - [ - "gene_synonym", - "JW2514" - ], - [ - "gene_synonym", - "iscS" - ], - [ - "gene_synonym", - "nuvC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6B7" - ], - [ - "gene_synonym", - "b2530" - ], - [ - "gene_synonym", - "ECK2527" - ], - [ - "gene_synonym", - "GeneID:947004" - ], - [ - "gene_synonym", - "yzzO" - ], - [ - "gene_synonym", - "yfhO" - ], - [ - "gene_synonym", - "ASAP:ABE-0008324" - ] - ], - "dna_sequence": "ATGAAATTACCGATTTATCTCGACTACTCCGCAACCACGCCGGTGGACCCGCGTGTTGCCGAGAAAATGATGCAGTTTATGACGATGGACGGAACCTTTGGTAACCCGGCCTCCCGTTCTCACCGTTTCGGCTGGCAGGCTGAAGAAGCGGTAGATATCGCCCGTAATCAGATTGCCGATCTGGTCGGCGCTGATCCGCGTGAAATCGTCTTTACCTCTGGTGCAACCGAATCTGACAACCTGGCGATCAAAGGTGCAGCCAACTTTTATCAGAAAAAAGGCAAGCACATCATCACCAGCAAAACCGAACACAAAGCGGTACTGGATACCTGCCGTCAGCTGGAGCGCGAAGGTTTTGAAGTCACCTACCTGGCACCGCAGCGTAACGGCATTATCGACCTGAAAGAACTTGAAGCAGCGATGCGTGACGACACCATCCTCGTGTCCATCATGCACGTAAATAACGAAATCGGCGTGGTGCAGGATATCGCGGCTATCGGCGAAATGTGCCGTGCTCGTGGCATTATCTATCACGTTGATGCAACCCAGAGCGTGGGTAAACTGCCTATCGACCTGAGCCAGTTGAAAGTTGACCTGATGTCTTTCTCCGGTCACAAAATCTATGGCCCGAAAGGTATCGGTGCGCTGTATGTACGTCGTAAACCGCGCGTACGCATCGAAGCGCAAATGCACGGCGGCGGTCACGAGCGCGGTATGCGTTCCGGCACTCTGCCTGTTCACCAGATCGTCGGAATGGGCGAGGCCTATCGCATCGCAAAAGAAGAGATGGCGACCGAGATGGAACGTCTGCGCGGCCTGCGTAACCGTCTGTGGAACGGCATCAAAGATATCGAAGAAGTTTACCTGAACGGTGACCTGGAACACGGTGCGCCGAACATTCTCAACGTCAGCTTCAACTACGTTGAAGGTGAGTCGCTGATTATGGCGCTGAAAGACCTCGCAGTTTCTTCAGGTTCCGCCTGTACGTCAGCAAGCCTCGAACCGTCCTACGTGCTGCGCGCGCTGGGGCTGAACGACGAGCTGGCACATAGCTCTATCCGTTTCTCTTTAGGTCGTTTTACTACTGAAGAAGAGATCGACTACACCATCGAGTTAGTTCGTAAATCCATCGGTCGTCTGCGTGACCTTTCTCCGCTGTGGGAAATGTACAAGCAGGGCGTGGATCTGAACAGCATCGAATGGGCTCATCATTAA", 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"iscR" - ], - [ - "gene_synonym", - "GI:16130456" - ], - [ - "gene_synonym", - "b2531" - ], - [ - "gene_synonym", - "GeneID:945279" - ], - [ - "gene_synonym", - "EcoGene:EG13397" - ], - [ - "gene_synonym", - "NP_417026.1" - ], - [ - "gene_synonym", - "yfhP" - ], - [ - "gene_synonym", - "ASAP:ABE-0008326" - ] - ], - "dna_sequence": "ATGAGACTGACATCTAAAGGGCGCTATGCCGTGACCGCAATGCTTGACGTTGCGCTCAACTCTGAAGCGGGCCCGGTACCGTTGGCTGATATTTCCGAACGTCAGGGAATTTCCCTTTCTTATCTGGAACAACTGTTTTCCCGTCTGCGTAAAAATGGTCTGGTTTCCAGCGTACGTGGACCAGGCGGTGGTTATCTGTTAGGCAAAGATGCCAGCAGCATCGCCGTTGGCGAAGTAATTAGCGCCGTTGACGAATCTGTAGATGCCACCCGTTGTCAGGGTAAAGGCGGCTGCCAGGGCGGCGATAAATGCCTGACCCACGCGCTGTGGCGTGATTTGAGCGACCGTCTCACCGGTTTTCTCAACAACATTACTTTAGGCGAACTGGTTAATAACCAGGAAGTGCTGGATGTGTCTGGTCGTCAGCATACTCACGACGCGCCACGCACCCGCACACAAGACGCGATCGACGTTAAGTTACGCGCTTAA", - "dna_sequence_length": 489, - "functions": [ - "isc operon transcriptional repressor", - "suf operon transcriptional activator", - "oxidative stress- and iron 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"dna_sequence": "ATGCTGCAAAATATTCGAATTGTGCTGGTGGAGACGTCACACACCGGCAATATGGGTTCTGTTGCCCGTGCCATGAAAACAATGGGATTAACCAATCTGTGGCTGGTTAATCCACTGGTGAAACCCGACTCCCAGGCGATTGCCCTGGCAGCAGGGGCCAGCGATGTGATTGGTAATGCTCACATCGTCGATACGCTCGACGAAGCGTTAGCCGGTTGTAGCCTGGTGGTGGGCACCAGCGCACGTTCCCGCACGCTGCCATGGCCGATGCTCGACCCGCGCGAATGCGGCCTGAAAAGCGTCGCTGAAGCGGCAAATACCCCGGTGGCGCTGGTGTTTGGTCGCGAGCGCGTCGGCTTGACCAATGAAGAGTTGCAGAAATGCCATTATCATGTCGCGATTGCGGCTAACCCGGAATACAGCTCGCTGAACCTGGCGATGGCGGTTCAGGTTATTGCCTATGAAGTGCGCATGGCCTGGCTGGCAACTCAGGAAAACGGCGAGCAGGTCGAGCATGAAGAGACGCCGTATCCGCTGGTCGATGATCTGGAGCGTTTTTATGGTCATCTGGAACAAACGCTGCTGGCAACCGGTTTTATCCGTGAAAACCATCCGGGGCAGGTGATGAATAAATTGCGCCGTCTGTTTACCCGTGCGCGCCCGGAAAGCCAGGAGTTGAATATCCTGCGCGGGATTCTGGCTTCTATTGAGCAGCAGAATAAAGGTAACAAGGCCGAATAA", - "dna_sequence_length": 741, - "functions": [ - "tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent" - ], - "id": "CDS_2514", - "location": [ - [ - "NC_000913", - 2663323, - "-", - 741 - ] - ], - "md5": "8a4659662410f907d94aabc5dd2eced0", - "parent_gene": "", - "protein_md5": "09f9c8a98471672eae8a4f00a1503757", - "protein_translation": "MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNKAE", - "protein_translation_length": 246, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2517" - ], - [ - "gene_synonym", - "suhB" - ], - [ - "gene_synonym", - "GeneID:947285" - ], - [ - "gene_synonym", - "GI:16130458" - ], - [ - "gene_synonym", - "b2533" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADG4" - ], - [ - "gene_synonym", - "ssyA" - ], - [ - "gene_synonym", - "EcoGene:EG10983" - ], - [ - "gene_synonym", - "ECK2530" - ], - [ - "gene_synonym", - "NP_417028.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008337" - ] - ], - "dna_sequence": "ATGCATCCGATGCTGAACATCGCCGTGCGCGCAGCGCGCAAGGCGGGTAATTTAATTGCCAAAAACTATGAAACCCCGGACGCTGTAGAAGCGAGCCAGAAAGGCAGTAACGATTTCGTGACCAACGTAGATAAAGCTGCCGAAGCGGTGATTATCGACACGATTCGTAAATCTTACCCACAGCACACCATCATCACCGAAGAAAGCGGTGAACTTGAAGGTACTGATCAGGATGTTCAATGGGTTATCGATCCACTGGATGGCACTACCAACTTTATCAAACGTCTGCCGCACTTCGCGGTATCTATCGCTGTTCGTATCAAAGGCCGCACCGAAGTTGCTGTGGTATACGATCCTATGCGTAACGAACTGTTCACCGCCACTCGCGGTCAGGGCGCACAGCTGAACGGCTACCGACTGCGCGGCAGCACCGCTCGCGATCTCGACGGTACTATTCTGGCGACCGGCTTCCCGTTCAAAGCAAAACAGTACGCCACTACCTACATCAACATCGTCGGCAAACTGTTCAACGAATGTGCAGACTTCCGTCGTACCGGTTCTGCGGCGCTGGATCTGGCTTACGTCGCTGCGGGTCGTGTTGACGGTTTCTTTGAAATCGGTCTGCGCCCGTGGGACTTCGCCGCAGGCGAGCTGCTGGTTCGTGAAGCGGGCGGCATCGTCAGCGACTTCACCGGTGGTCATAACTACATGCTGACCGGTAACATCGTTGCTGGTAACCCGCGCGTTGTTAAAGCCATGCTGGCGAACATGCGTGACGAGTTAAGCGACGCTCTGAAGCGTTAA", - "dna_sequence_length": 804, - "functions": [ - "inositol monophosphatase" - ], - "id": "CDS_2515", - "location": [ - [ - "NC_000913", - 2663442, - "+", - 804 - ] - ], - "md5": "55a8da2bdcb51028d22bb94c48abedf7", - "parent_gene": "", - "protein_md5": "ccdb8a845e15184007f49a2366f7bc56", - "protein_translation": "MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDALKR", - "protein_translation_length": 267, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008340" - ], - [ - "gene_synonym", - "b2534" - ], - [ - "gene_synonym", - "ECK2531" - ], - [ - "gene_synonym", - "NP_417029.4" - ], - [ - "gene_synonym", - "JW2518" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77538" - ], - [ - "gene_synonym", - "EcoGene:EG13453" - ], - [ - "gene_synonym", - "GeneID:945059" - ], - [ - "gene_synonym", - "GI:226524738" - ], - [ - "gene_synonym", - "yfhR" - ] - ], - "dna_sequence": "ATGGCACTGCCAGTGAACAAACGCGTTCCCAAAATTCTGTTTATTCTCTTTGTTGTTGCCTTCTGCGTTTATTTAGTGCCGCGCGTTGCCATCAACTTCTTCTATTATCCCGACGATAAAATTTACGGTCCCGATCCCTGGTCGGCGGAATCCGTCGAATTTACGGCTAAGGACGGTACTCGTCTGCAAGGCTGGTTTATCCCTTCTTCGACGGGCCCTGCTGACAACGCCATCGCAACCATCATTCATGCTCACGGCAATGCCGGAAATATGTCCGCCCACTGGCCGCTGGTCAGTTGGTTACCCGAGCGTAATTTCAACGTTTTTATGTTTGATTATCGCGGGTTTGGTAAATCAAAAGGCACGCCGTCCCAGGCCGGATTGCTGGACGATACGCAAAGTGCCATCAATGTGGTGCGCCATCGCAGTGATGTAAACCCACAACGTCTGGTGCTGTTCGGGCAGAGTATTGGCGGGGCGAATATTCTGGATGTTATTGGTCGGGGTGATCGTGAAGGCATACGTGCGGTGATCCTCGACTCCACATTTGCCTCTTATGCAACCATCGCCAACCAAATGATCCCCGGCAGTGGCTACTTACTTGATGAGAGTTACAGCGGCGAAAATTATATCGCCAGCGTCAGCCCGATCCCGCTTTTACTCATTCACGGTAAAGCTGATCACGTTATCCCATGGCAGCACAGCGAAAAGTTGTATAGCCTGGCAAAAGAGCCAAAACGGTTGATCCTAATCCCGGATGGCGAACACATTGATGCTTTTTCCGATCGTCACGGCGATGTTTATCGCGAACAGATGGTGGACTTTATCCTTAGCGCGTTGAATCCGCAGAACTAA", - "dna_sequence_length": 855, - "functions": [ - "putative S9 family prolyl oligopeptidase" - ], - "id": "CDS_2516", - "location": [ - [ - "NC_000913", - 2664390, - "+", - 855 - ] - ], - "md5": "b667ccf2d5d6583c5596e1b0f834accc", - "parent_gene": "", - "protein_md5": "7488463354ecbdbf4d07993f0b67ae82", - "protein_translation": "MALPVNKRVPKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGPDPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIPLLLIHGKADHVIPWQHSEKLYSLAKEPKRLILIPDGEHIDAFSDRHGDVYREQMVDFILSALNPQN", - "protein_translation_length": 284, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111454" - ], - [ - "gene_synonym", - "GeneID:947009" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P54901" - ], - [ - "gene_synonym", - "b2535" - ], - [ - "gene_synonym", - "ASAP:ABE-0008346" - ], - [ - "gene_synonym", - "NP_417030.2" - ], - [ - "gene_synonym", - "ECK2532" - ], - [ - "gene_synonym", - "csiE" - ], - [ - "gene_synonym", - "csi-16" - ], - [ - "gene_synonym", - "JW5878" - ], - [ - "gene_synonym", - "EcoGene:EG13418" - ] - ], - "dna_sequence": "ATGATGCCTACGCTTGCTCCACCATCTGTCCTTTCGGCTCCCCAGCGCCGCTGCCAGATCTTGCTGACGCTCTTTCAGCCGGGGTTGACCGCCACCATGGCAACCTTCAGCGAGCTTAATGGTGTGGATGATGATATTGCCAGTCTTGATATCAGCGAAACAGGACGGGAGATCCTGCGCTATCATCAACTCACACTGACGACTGGTTATGACGGTAGCTACCGGGTTGAAGGTACAGTGCTTAACCAACGTTTGTGTTTATTTCACTGGCTACGACGTGGTTTCCGTCTGTGTCCGTCATTTATTACCAGCCAATTCACCCCCGCCCTGAAGAGTGAACTGAAGCGGCGCGGAATTGCGCGTAACTTTTACGACGATACCAATCTACAAGCGTTAGTGAATCTCTGCTCCCGACGGCTGCAAAAACGCTTTGAATCGCGCGATATTCATTTCCTGTGTCTGTATCTGCAATATTGTTTGCTGCAGCACCACGCTGGAATTACGCCTCAGTTTAATCCGCTCCAACGTCGCTGGGCGGAATCCTGCCTTGAATTTCAGGTAGCGCAGGAAATTGGACGCCACTGGCAGCGTCGGGCGCTCCAGCCTGTACCACCTGATGAGCCACTGTTTATGGCACTACTTTTTTCCATGTTGCGGGTTCCCGATCCATTGCGGGATGCGCATCAGCGGGACAGACAATTGCGTCAGTCTATCAAACGTCTGGTAAACCATTTTCGTGAGCTGGGAAATGTTCGTTTTTATGATGAACAGGGGTTATGTGATCAGCTTTATACCCACCTCGCCCAGGCGTTAAATCGCAGTTTGTTTGCCATCGGTATTGATAATACCCTGCCGGAAGAGTTCGCCAGACTGTACCCACGCCTGGTGCGCACCACCCGCGCGGCGCTGGCCGGATTTGAAAGTGAATACGGCGTCCATCTTTCTGATGAGGAAAGTGGTCTGGTCGCGGTGATTTTCGGTGCCTGGCTAATGCAGGAAAACGATCTGCATGAAAAACAGATTATTCTTCTTACCGGGAATGATAGCGAGCGAGAAGCGCAGATTGAGCAGCAGTTACGCGAACTAACGTTACTGCCGCTCAACATTAAGCATATGTCGGTAAAGGCATTTTTGCAGACAGGCGCTCCGCGTGGCGCGGCACTGATTATTGCGCCTTATACCATGCCATTACCGCTCTTTTCACCACCGCTGATCTATACGGACCTGACGCTGACAACACATCAACAGGAGCAGATCCGCAAAATGCTCGAATCAGCATGA", - "dna_sequence_length": 1281, - "functions": [ - "stationary phase inducible protein" - ], - "id": "CDS_2517", - "location": [ - [ - "NC_000913", - 2665435, - "+", - 1281 - ] - ], - "md5": "a218e0e516e7b76ae36f8bd4bbd382dd", - "parent_gene": "", - "protein_md5": "4539360304fc8443a12558e1c4d8c0f3", - "protein_translation": "MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPYTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA", - "protein_translation_length": 426, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hcaT" - ], - [ - "gene_synonym", - "ASAP:ABE-0008348" - ], - [ - "gene_synonym", - "b2536" - ], - [ - "gene_synonym", - "EcoGene:EG13454" - ], - [ - "gene_synonym", - "GeneID:947007" - ], - [ - "gene_synonym", - "ECK2533" - ], - [ - "gene_synonym", - "GI:16130461" - ], - [ - "gene_synonym", - "yfhS" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47142" - ], - [ - "gene_synonym", - "NP_417031.1" - ], - [ - "gene_synonym", - "JW2520" - ] - ], - "dna_sequence": "ATGGTTTTGCAATCCACGCGCTGGTTGGCGCTCGGCTATTTCACATACTTTTTTAGTTACGGCATTTTTCTACCTTTCTGGAGCGTCTGGCTTAAAGGGATTGGTTTAACGCCAGAAACCATCGGCCTGTTATTGGGGGCAGGTCTGGTTGCCCGTTTCCTCGGGAGTTTGCTCATCGCGCCCCGCGTCAGCGATCCTTCCCGCCTGATTTCCGCCTTGCGCGTGCTGGCACTGCTGACACTTCTCTTTGCTGTCGCCTTCTGGGCGGGGGCGCACGTAGCGTGGCTGATGCTGGTGATGATTGGCTTTAACCTCTTTTTCTCACCACTGGTACCGTTGACCGATGCACTGGCGAATACGTGGCAAAAGCAGTTCCCGCTTGATTACGGCAAAGTGCGACTGTGGGGCTCGGTGGCGTTTGTCATTGGCTCGGCGCTGACGGGCAAACTGGTCACTATGTTTGATTATCGGGTGATCCTCGCGCTGTTGACGTTGGGCGTGGCATCCATGCTGCTCGGCTTTCTCATCCGTCCGACGATTCAGCCACAAGGGGCAAGTCGCCAGCAGGAGAGCACCGGTTGGTCTGCGTGGTTGGCGCTGGTTCGCCAGAACTGGCGCTTTCTGGCCTGCGTTTGTTTATTGCAGGGGGCACATGCGGCCTATTACGGTTTTAGCGCCATTTACTGGCAGGCAGCTGGCTACTCGGCCTCGGCGGTGGGGTATTTGTGGTCGCTGGGCGTGGTGGCGGAAGTCATTATCTTTGCGCTGAGTAATAAACTTTTCCGCCGTTGTAGTGCACGCGATATGCTGTTGATCTCGGCGATTTGCGGCGTAGTGCGCTGGGGCATTATGGGAGCAACTACGGCGTTGCCGTGGTTGATAGTGGTGCAAATTCTGCATTGCGGCACCTTCACGGTCTGCCACCTGGCCGCCATGCGTTATATTGCTGCTCGCCAGGGTAGCGAAGTCATCCGTTTACAGGCGGTTTACTCTGCCGTCGCGATGGGCGGCAGTATCGCTATCATGACCGTTTTCGCCGGTTTCCTGTATCAATATCTGGGCCACGGCGTGTTCTGGGTAATGGCGCTGGTGGCGCTTCCGGCAATGTTTTTGCGCCCGAAAGTTGTTCCCTCATGCTGA", - "dna_sequence_length": 1140, - "functions": [ - "putative 3-phenylpropionic transporter" - ], - "id": "CDS_2518", - "location": [ - [ - "NC_000913", - 2667846, - "-", - 1140 - ] - ], - "md5": "25171749e81d282039e007d9ba1eed61", - "parent_gene": "", - "protein_md5": "d2e7d0b083eaf00e77aaa538711b503e", - "protein_translation": "MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLLLGAGLVARFLGSLLIAPRVSDPSRLISALRVLALLTLLFAVAFWAGAHVAWLMLVMIGFNLFFSPLVPLTDALANTWQKQFPLDYGKVRLWGSVAFVIGSALTGKLVTMFDYRVILALLTLGVASMLLGFLIRPTIQPQGASRQQESTGWSAWLALVRQNWRFLACVCLLQGAHAAYYGFSAIYWQAAGYSASAVGYLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAICGVVRWGIMGATTALPWLIVVQILHCGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVAMGGSIAIMTVFAGFLYQYLGHGVFWVMALVALPAMFLRPKVVPSC", - "protein_translation_length": 379, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417032.1" - ], - [ - "gene_synonym", - "hcaR" - ], - [ - "gene_synonym", - "ASAP:ABE-0008351" - ], - [ - "gene_synonym", - "b2537" - ], - [ - "gene_synonym", - "ECK2534" - ], - [ - "gene_synonym", - "EcoGene:EG13455" - ], - [ - "gene_synonym", - "phdR" - ], - [ - "gene_synonym", - "GI:16130462" - ], - [ - "gene_synonym", - "GeneID:947000" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47141" - ], - [ - "gene_synonym", - "yfhT" - ], - [ - "gene_synonym", - "JW2521" - ] - ], - "dna_sequence": "ATGGAACTACGGCATTTACGCTATTTCGTCGCAGTGGCGCAGGCACTGAACTTTACCCGTGCGGCGGAAAAACTGCATACCTCACAGCCTTCGTTAAGCAGCCAGATCCGCGATCTTGAAAACTGTGTCGGTGTTCCGTTACTGGTGAGGGATAAGCGCAAAGTCGCGTTGACGGCGGCGGGAGAATGTTTTCTCCAGGACGCGCTGGCAATCCTCGAACAAGCGGAAAATGCCAAATTACGGGCGCGGAAAATTGTTCAGGAAGACAGACAATTAACCATTGGCTTTGTGCCATCGGCGGAAGTGAATTTACTGCCAAAAGTATTACCGATGTTTCGTCTCAGACAGCCAGACACCTTGATTGAGCTGGTGAGTTTAATCACCACGCAACAGGAGGAAAAAATTCGCCGTGGTGAACTCGACGTCGGCTTAATGCGCCATCCTGTTTATAGCCCGGAGATTGATTATCTGGAGCTTTTTGACGAACCATTAGTGGTTGTGTTACCGGTTGATCACCCTTTAGCACATGAAAAAGAGATCACCGCCGCGCAACTGGATGGCGTGAATTTCGTCAGTACCGATCCGGTGTATTCCGGTTCGCTTGCGCCGATCGTTAAAGCGTGGTTTGCGCAAGAAAACAGCCAGCCAAATATCGTCCAGGTGGCAACGAATATTCTGGTGACCATGAATCTGGTGGGCATGGGGCTGGGCGTCACTTTGATACCCGGTTATATGAATAATTTTAATACCGGACAGGTTGTTTTTCGTCCCATTGCCGGAAATGTGCCTTCCATTGCTTTACTGATGGCGTGGAAGAAAGGGGAGATGAAGCCGGCATTACGCGATTTCATCGCCATTGTGCAGGAACGTTTGGCAAGCGTAACGGCATAA", - "dna_sequence_length": 891, - "functions": [ - "hca operon transcriptional regulator" - ], - "id": "CDS_2519", - "location": [ - [ - "NC_000913", - 2668896, - "-", - 891 - ] - ], - "md5": "3b2c4b244bf1d552e3f5568af9abb7e8", - "parent_gene": "", - "protein_md5": "de66fefae2695402d2b9a57258e15605", - "protein_translation": "MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAAGECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQPDTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELFDEPLVVVLPVDHPLAHEKEITAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLGVTLIPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEMKPALRDFIAIVQERLASVTA", - "protein_translation_length": 296, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_008592385.1" - ], - [ - "gene_synonym", - "GI:556503836" - ], - [ - "gene_synonym", - "EcoGene:EG14501" - ], - [ - "gene_synonym", - "b4706" - ], - [ - "gene_synonym", - "iroK" - ], - [ - "gene_synonym", - "GeneID:14678510" - ], - [ - "gene_synonym", - "ECK4518" - ] - ], - "dna_sequence": "ATGAAGCCGGCATTACGCGATTTCATCGCCATTGTGCAGGAACGTTTGGCAAGCGTAACGGCATAA", - "dna_sequence_length": 66, - "functions": [ - "3-hydroxypropionic acid resistance peptide" - ], - "id": "CDS_2520", - "location": [ - [ - "NC_000913", - 2668071, - "-", - 66 - ] - ], - "md5": "fc1143b9ad9a8d64b3459633d8b95a37", - "parent_gene": "", - "protein_md5": "a8df40f5ee4d2ee6dd3d3892f0881ebe", - "protein_translation": "MKPALRDFIAIVQERLASVTA", - "protein_translation_length": 21, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "phdC1" - ], - [ - "gene_synonym", - "b2538" - ], - [ - "gene_synonym", - "hcaA1" - ], - [ - "gene_synonym", - "yfhU" - ], - [ - "gene_synonym", - "EcoGene:EG13456" - ], - [ - "gene_synonym", - "ASAP:ABE-0008355" - ], - [ - "gene_synonym", - "NP_417033.1" - ], - [ - "gene_synonym", - "hcaE" - ], - [ - "gene_synonym", - "ECK2535" - ], - [ - "gene_synonym", - "hcaA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABR5" - ], - [ - "gene_synonym", - "GeneID:946998" - ], - [ - "gene_synonym", - "JW2522" - ], - [ - "gene_synonym", - "digA" - 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"ATGACCACACCCTCAGATTTGAACATTTACCAACTGATTGACACCCAAAATGGTCGGGTCACTCCGCGTATTTATACCGACCCGGATATTTACCAACTGGAGCTTGAGCGTATTTTCGGTCGTTGCTGGCTATTTCTCGCCCACGAAAGCCAGATCCCAAAACCCGGTGATTTCTTTAACACCTACATGGGAGAAGATGCGGTTGTCGTAGTGCGTCAGAAAGACGGCAGCATCAAGGCGTTTCTCAACCAATGCCGCCACCGGGCCATGCGTGTGAGTTATGCAGATTGCGGCAACACTCGCGCCTTTACCTGCCCGTATCACGGCTGGTCTTATGGCATTAACGGCGAGTTGATCGATGTACCGCTGGAACCTCGCGCCTACCCACAAGGGTTGTGTAAATCCCACTGGGGACTAAACGAAGTTCCTTGTGTGGAGAGTTATAAAGGGCTAATTTTTGGCAACTGGGATACCAGCGCACCGGGCCTGCGTGATTACCTGGGTGACATTGCCTGGTATCTGGATGGCATGCTGGATCGTCGCGAAGGCGGCACCGAAATTGTCGGCGGCGTACAAAAGTGGGTGATCAACTGTAACTGGAAATTCCCGGCAGAGCAGTTCGCCAGTGACCAGTATCATGCTCTGTTCAGCCATGCTTCTGCCGTTCAGGTATTAGGGGCGAAAGATGATGGCAGCGATAAGCGCCTCGGTGATGGACAAACCGCCCGCCCGGTGTGGGAAACCGCCAAAGATGCGCTGCAATTTGGTCAGGACGGTCACGGTAGCGGTTTCTTCTTTACTGAAAAACCGGATGCTAATGTCTGGGTCGATGGCGCAGTTTCAAGCTATTACCGCGAAACCTATGCCGAAGCAGAACAACGTTTAGGTGAAGTTCGCGCCCTGCGCCTGGCGGGTCATAACAATATTTTCCCCACGCTTTCATGGCTAAACGGCACTGCCACACTCCGCGTCTGGCATCCGCGCGGCCCTGATCAAGTTGAAGTGTGGGCGTTCTGTATTACTGACAAAGCCGCCTCCGATGAAGTTAAAGCCGCTTTTGAAAACAGCGCCACTCGTGCTTTTGGTCCTGCTGGTTTTCTCGAGCAGGATGACTCGGAGAACTGGTGTGAAATCCAGAAATTGCTTAAAGGCCACCGCGCCCGCAACAGCAAACTGTGTCTGGAAATGGGGCTTGGTCAGGAAAAGCGCCGCGACGACGGCATTCCTGGCATTACTAACTATATCTTTTCAGAAACTGCCGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCTTACCAGCAGGAGGTGATGAAATGA", 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- "gene_synonym", - "EcoGene:EG13457" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47140" - ], - [ - "gene_synonym", - "GI:16130464" - ], - [ - "gene_synonym", - "ASAP:ABE-0008357" - ], - [ - "gene_synonym", - "ECK2536" - ], - [ - "gene_synonym", - "hcaF" - ], - [ - "gene_synonym", - "hcaA" - ], - [ - "gene_synonym", - "hcaB" - ], - [ - "gene_synonym", - "b2539" - ], - [ - "gene_synonym", - "NP_417034.1" - ], - [ - "gene_synonym", - "JW2523" - ], - [ - "gene_synonym", - "digB" - ], - [ - "gene_synonym", - "yfhV" - ] - ], - "dna_sequence": "ATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTGGAAATTTCGTGACTGGCTGGCGCAGCTCGACGAAGAGATTCGTTACACCATGCGCACCACAGTTAACGCGCAAACACGCGACCGCCGCAAAGGCGTCCAGCCACCGACAACCTGGATTTTTAATGACACCAAAGACCAGCTGGAGCGGCGAATCGCCCGTCTGGAAACGGGCATGGCCTGGGCAGAAGAGCCGCCGTCACGCACCCGTCACTTAATCAGCAACTGCCAGATAAGCGAAACCGACATCCCAAACGTATTTGCTGTGCGGGTAAATTATCTGCTTTATCGGGCACAAAAAGAGCGCGATGAAACATTCTATGTTGGAACGCGTTTCGACAAAGTTCGCCGTCTGGAAGATGACAACTGGCGCTTGCTGGAACGGGATATCGTCCTGGATCAAGCGGTAATCACTTCCCATAACCTGAGTGTACTGTTCTGA", - "dna_sequence_length": 519, - "functions": [ - "3-phenylpropionate dioxygenase, small (beta) subunit" - ], - "id": "CDS_2522", - "location": [ - [ - "NC_000913", - 2670390, - "+", - 519 - ] - ], - "md5": "72a888ed392e411ae143729132ab83bb", - "parent_gene": "", - "protein_md5": "2efd003e6e679e0984648127783658c1", - "protein_translation": "MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF", - "protein_translation_length": 172, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008359" - ], - [ - "gene_synonym", - "phdB" - ], - [ - "gene_synonym", - "hcaA3" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABW0" - ], - [ - "gene_synonym", - "EcoGene:EG13458" - ], - [ - "gene_synonym", - "GeneID:947015" - ], - [ - "gene_synonym", - "ECK2537" - ], - [ - "gene_synonym", - "GI:16130465" - ], - [ - "gene_synonym", - "hcaC" - ], - [ - "gene_synonym", - "b2540" - ], - [ - "gene_synonym", - "NP_417035.1" - ], - [ - "gene_synonym", - "JW2524" - ], - [ - "gene_synonym", - "yfhW" - ] - ], - "dna_sequence": "ATGAATCGAATTTATGCGTGTCCCGTTGCGGATGTGCCGGAGGGTGAGGCTCTCCGGATCGATACCTCGCCCGTCATCGCCCTGTTCAACGTTGGCGGCGAGTTTTATGCCATTAACGATCGTTGCAGCCATGGTAATGCGTCAATGTCAGAAGGGTATCTGGAAGATGACGCCACGGTGGAGTGCCCGCTACACGCCGCCAGTTTTTGCCTGAAAACGGGGAAAGCGTTATGCCTGCCCGCCACCGATCCGCTCACCACTTATCCAGTACACGTTGAAGGTGGTGACATTTTCATCGACTTACCGGAGGCGCAGCCATGA", - "dna_sequence_length": 321, - "functions": [ - "3-phenylpropionate dioxygenase, ferredoxin subunit" - ], - "id": "CDS_2523", - "location": [ - [ - "NC_000913", - 2670908, - "+", - 321 - ] - ], - "md5": "6ca637969a6b64fb9036a78012011063", - "parent_gene": "", - "protein_md5": "f28ad39557289061743829a0c5dd4184", - "protein_translation": "MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSHGNASMSEGYLEDDATVECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGGDIFIDLPEAQP", - "protein_translation_length": 106, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008361" - ], - [ - "gene_synonym", - "EcoGene:EG13459" - ], - [ - "gene_synonym", - "phdD" - ], - [ - "gene_synonym", - "GeneID:945346" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CI31" - ], - [ - "gene_synonym", - "NP_417036.1" - ], - [ - "gene_synonym", - "GI:16130466" - ], - [ - "gene_synonym", - "yfhX" - ], - [ - "gene_synonym", - "hcaB" - ], - [ - "gene_synonym", - "b2541" - ], - [ - "gene_synonym", - "JW2525" - ], - [ - "gene_synonym", - "ECK2538" - ] - ], - "dna_sequence": "ATGAGCGATCTGCATAACGAGTCCATTTTTATTACCGGCGGCGGATCGGGATTAGGGCTGGCGCTGGTCGAGCGATTTATCGAAGAAGGCGCGCAGGTTGCCACGCTGGAACTGTCGGCGGCAAAAGTCGCCAGTCTGCGTCAGCGATTTGGCGAACATATTCTGGCGGTGGAAGGTAACGTGACCTGTTATGCCGATTATCAACGCGCGGTCGATCAGATCCTGACTCGTTCCGGCAAGCTGGATTGTTTTATCGGCAATGCAGGCATCTGGGATCACAATGCCTCACTGGTTAATACTCCCGCAGAGACGCTCGAAACCGGCTTCCACGAGCTGTTTAACGTCAATGTTCTCGGTTACCTGCTGGGCGCAAAAGCCTGCGCTCCGGCGTTAATCGCCAGTGAAGGCAGCATGATTTTCACACTGTCAAATGCCGCCTGGTATCCTGGCGGCGGTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGGAGAAAATTGCCGCCATTTTACCGCTGCAATTTTTCCCGCAACCGGCGGATTTTACGGGGCCGTATGTGATGTTGACATCGCGGCGCAATAATCGCGCATTAAGCGGTGTGATGATCAACGCTGATGCGGGTTTAGCGATTCGCGGCATTCGCCACGTAGCGGCTGGGCTGGATCTTTAA", - "dna_sequence_length": 813, - "functions": [ - "2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase" - ], - "id": "CDS_2524", - "location": [ - [ - "NC_000913", - 2671225, - "+", - 813 - ] - ], - "md5": "3869891d1700e6c2ff762a8839b35869", - "parent_gene": "", - "protein_md5": "e9714f88a73655d115d4e235c9793be8", - "protein_translation": "MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVASLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPAETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASKHAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAILPLQFFPQPADFTGPYVMLTSRRNNRALSGVMINADAGLAIRGIRHVAAGLDL", - "protein_translation_length": 270, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "phdA" - ], - [ - "gene_synonym", - "hcaA4" - ], - [ - "gene_synonym", - "NP_417037.1" - ], - [ - "gene_synonym", - "GeneID:945427" - ], - [ - "gene_synonym", - "hcaD" - ], - [ - "gene_synonym", - "GI:16130467" - ], - [ - "gene_synonym", - "ASAP:ABE-0008363" - ], - [ - "gene_synonym", - "EcoGene:EG13460" - ], - [ - "gene_synonym", - "JW2526" - ], - [ - "gene_synonym", - "b2542" - ], - [ - "gene_synonym", - "yfhY" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77650" - ], - [ - "gene_synonym", - "ECK2539" - ] - ], - "dna_sequence": "ATGAAAGAAAAAACGATCATTATTGTCGGTGGCGGGCAAGCGGCGGCAATGGCTGCGGCCTCGCTACGCCAGCAAGGGTTCACCGGTGAGCTGCATCTGTTTTCCGATGAGCGACATCTTCCTTATGAACGACCTCCACTCTCGAAATCCATGTTGCTGGAAGATTCCCCGCAGTTACAGCAGGTGTTACCCGCTAACTGGTGGCAGGAAAACAATGTTCATCTGCATTCCGGTGTAACCATCAAAACGCTGGGTCGCGACACACGAGAGTTAGTGTTAACCAACGGCGAAAGCTGGCACTGGGATCAGCTTTTTATAGCAACCGGCGCGGCAGCTCGACCGCTGCCGTTGCTTGATGCACTGGGAGAACGCTGCTTTACCCTACGCCATGCCGGTGATGCCGCCAGACTGCGAGAAGTTCTGCAGCCCGAACGGTCAGTCGTGATTATCGGTGCCGGAACTATTGGTCTGGAACTGGCTGCCAGCGCCACGCAGCGCAGATGTAAGGTGACAGTGATTGAACTGGCGGCAACCGTCATGGGCCGTAATGCACCACCGCCCGTGCAACGCTATCTTTTACAGCGCCACCAGCAGGCTGGTGTGCGCATTCTGCTCAATAATGCCATTGAACATGTGGTCGATGGTGAAAAAGTAGAACTGACGCTGCAAAGTGGGGAAACGCTTCAGGCTGATGTGGTGATTTACGGTATTGGTATCAGCGCCAACGAGCAACTGGCTCGCGAGGCCAACCTTGATACTGCCAATGGCATTGTCATTGATGAGGCTTGCCGCACCTGCGATCCCGCGATCTTTGCCGGTGGCGATGTGGCAATCACTCGTCTTGATAATGGTGCACTACACCGCTGCGAAAGCTGGGAAAACGCCAATAACCAGGCGCAAATTGCCGCTGCCGCAATGTTAGGGCTACCGCTACCGCTACTGCCGCCGCCGTGGTTCTGGAGCGATCAGTACAGTGATAACTTACAGTTTATTGGCGATATGCGTGGCGATGACTGGCTTTGTCGTGGCAACCCGGAAACTCAGAAGGCGATTTGGTTTAATCTGCAAAACGGCGTGCTTATCGGTGCGGTCACGCTGAATCAGGGGCGTGAGATTCGCCCAATTCGCAAATGGATCCAGAGCGGCAAAACGTTTGATGCGAAACTGCTGATAGATGAGAACATCGCGCTTAAATCACTGTAA", 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- ], - [ - "gene_synonym", - "ASAP:ABE-0008365" - ], - [ - "gene_synonym", - "yphA" - ], - [ - "gene_synonym", - "JW2527" - ], - [ - "gene_synonym", - "b2543" - ], - [ - "gene_synonym", - "NP_417038.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD47" - ] - ], - "dna_sequence": "ATGAACACACTACGTTATTTTGATTTTGGAGCTGCCCGCCCCGTTTTGTTATTAATTGCCCGTATCGCCGTGGTCTTAATTTTCATTATTTTTGGTTTTCCCAAAATGATGGGCTTTGACGGTACGGTCCAATATATGGCCTCGTTGGGCGCGCCAATGCCGATGCTGGCAGCGATTATTGCGGTAGTTATGGAAGTGCCCGCCGCGATATTAATCGTGCTTGGCTTTTTCACCCGTCCGCTGGCGGTGCTGTTTATTTTCTACACGCTGGGTACGGCGGTGATTGGTCACCATTACTGGGATATGACCGGCGATGCGGTTGGGCCAAATATGATTAATTTCTGGAAGAATGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAG", - "dna_sequence_length": 423, - "functions": [ - "DoxX family inner membrane protein" - ], - "id": "CDS_2526", - "location": [ - [ - "NC_000913", - 2673346, - "+", - 423 - ] - ], - "md5": "fbddde9ae453ef87a6550523b4cd28af", - "parent_gene": "", - "protein_md5": "d5b99aaccb74912ff045ab72909bc3e4", - "protein_translation": "MNTLRYFDFGAARPVLLLIARIAVVLIFIIFGFPKMMGFDGTVQYMASLGAPMPMLAAIIAVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDMTGDAVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR", - "protein_translation_length": 140, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417039.1" - ], - [ - "gene_synonym", - "GeneID:947017" - ], - [ - "gene_synonym", - "yphB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76584" - ], - [ - "gene_synonym", - "EcoGene:EG13463" - ], - [ - "gene_synonym", - "ECK2541" - ], - [ - "gene_synonym", - "JW2528" - ], - [ - "gene_synonym", - "ASAP:ABE-0008368" - ], - [ - "gene_synonym", - "b2544" - ], - [ - "gene_synonym", - "GI:16130469" - ] - ], - "dna_sequence": "ATGACCATCTATACCTTATCCCACGGGTCGCTAAAGCTGGACGTTTCTGACCAGGGCGGCGTAATCGAAGGCTTCTGGCGCGATACGACGCCGCTCTTACGTCCTGGTAAAAAAAGCGGTGTGGCAACCGATGCCTCATGTTTTCCGCTGGTGCCATTTGCAAACCGGGTGAGCGGCAATCGTTTTGTCTGGCAGGGGCGTGAGTATCAACTGCAACCGAATGTTGAGTGGGATGCGCACTATCTACACGGCGATGGCTGGCTGGGCGAGTGGCAATGTGTCTCGCACAGCGATGATAGTTTGTGTCTGGTGTATGAACATCGCAGCGGTGTCTATCACTATCGGGTAAGTCAGGCGTTTCATTTAACGGCGGATACGCTGACGGTGACGCTCTCTGTCACCAATCAAGGGGCAGAGACGCTGCCATTTGGTACCGGCTGGCATCCTTATTTTCCGTTGTCGCCGCAAACGCGGATTCAGGCACAGGCGAGCGGTTACTGGCTGGAGCGGGAGCAGTGGCTGGCGGGTGAGTTTTGCGAGCAGCTACCGCAGGAACTGGATTTTAACCAGCCCGCGCCGTTGCCGCGCCAGTGGGTGAACAATGGTTTTGCCGGATGGAATGGTCAGGCCCGCATCGAGCAGCCGCAGGAAGGTTATGCCATCATCATGGAAACGACGCCACCTGCACCGTGTTATTTCATCTTTGTTTCCGACCCTGCGTTTGATAAAGGATATGCGTTTGATTTCTTCTGTCTGGAACCGATGAGCCATGCGCCGGATGATCATCATCGCCCGGAAGGGGGTGATCTCATTGCGCTAGCACCAGGGGAATCAACAACTTCAGAGATGTCGTTGCGGGTAGAGTGGCTGTAA", - "dna_sequence_length": 873, - "functions": [ - "mutarotase superfamily protein, YphB family" - ], - "id": "CDS_2527", - "location": [ - [ - "NC_000913", - 2674688, - "-", - 873 - ] - ], - "md5": "32f733a9807b5ad3eaa7e6164205ada0", - "parent_gene": "", - "protein_md5": "d67830c3cf09347513af4f49e92fd5e5", - "protein_translation": "MTIYTLSHGSLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATDASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLCLVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQAQASGYWLEREQWLAGEFCEQLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQPQEGYAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRVEWL", - "protein_translation_length": 290, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111455" - ], - [ - "gene_synonym", - "GeneID:947019" - ], - [ - "gene_synonym", - "NP_417040.2" - ], - [ - "gene_synonym", - "yphC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77360" - ], - [ - "gene_synonym", - "ASAP:ABE-0008370" - ], - [ - "gene_synonym", - "ECK2542" - ], - [ - "gene_synonym", - "JW5842" - ], - [ - "gene_synonym", - "EcoGene:EG13464" - ], - [ - "gene_synonym", - "b2545" - ] - ], - "dna_sequence": "ATGAAAACGATGCTGGCAGCTTATTTACCAGGAAATTCGACCGTCGATCTGCGGGAAGTTGCGGTGCCGACGCCGGGGATTAACCAGGTACTGATCAAAATGAAATCCTCCGGGATTTGCGGAAGCGATGTCCACTATATCTATCATCAACACCGTGCCACAGCGGCGGCACCCGATAAACCGTTATACCAGGGCTTTATCAACGGTCATGAACCGTGCGGGCAGATTGTGGCGATGGGGCAAGGCTGCCGCCATTTTAAAGAGGGCGACCGCGTGCTGGTGTATCACATTTCTGGCTGTGGTTTTTGCCCGAACTGCCGTCGCGGTTTTCCTATTTCTTGTACTGGCGAAGGAAAAGCGGCTTACGGCTGGCAGCGTGACGGCGGTCATGCCGAATACTTGCTGGCGGAAGAAAAAGATCTGATCCTCCTGCCGGATGCGCTGAGCTACGAAGATGGTGCGTTTATCAGTTGCGGCGTTGGTACAGCGTATGAAGGAATTTTGCGCGGCGAAGTTTCCGGCAGTGATAACGTGCTGGTGGTCGGTCTGGGGCCAGTCGGCATGATGGCGATGATGCTGGCGAAAGGTCGCGGTGCAAAACGGATCATCGGCGTTGATATGCTGCCGGAACGTCTGGCGATGGCAAAACAGTTAGGGGTGATGGATCACGGCTATTTAGCAACCACCGAAGGTCTGCCGCAGATTATCGCCGAACTCACCCACGGTGGCGCGGATGTTGCGCTCGATTGTTCCGGTAATGCCGCAGGTCGCTTGCTGGCACTGCAATCCACCGCTGACTGGGGACGGGTGGTTTACATTGGTGAAACCGGAAAAGTGGAATTCGAGGTCAGCGCCGATCTGATGCACCATCAACGGCGGATTATCGGCTCCTGGGTGACCAGTCTGTTCCATATGGAAAAATGCGCCCATGATCTGACGGACTGGAAGCTGTGGCCGCGTAACGCCATTACCCATCGCTTCTCGCTGGAACAGGCAGGTGATGCCTATGCGCTGATGGCGAGCGGCAAATGCGGGAAAGTTGTGATTAACTTCCCGGATTAA", - "dna_sequence_length": 1062, - "functions": [ - "putative Zn-dependent NAD(P)-binding oxidoreductase" - ], - "id": "CDS_2528", - "location": [ - [ - "NC_000913", - 2675761, - "-", - 1062 - ] - ], - "md5": "facd37b24d2a849097a00eea5aa66908", - "parent_gene": "", - "protein_md5": "664aea0136ed3b684ce730124e65f055", - "protein_translation": "MKTMLAAYLPGNSTVDLREVAVPTPGINQVLIKMKSSGICGSDVHYIYHQHRATAAAPDKPLYQGFINGHEPCGQIVAMGQGCRHFKEGDRVLVYHISGCGFCPNCRRGFPISCTGEGKAAYGWQRDGGHAEYLLAEEKDLILLPDALSYEDGAFISCGVGTAYEGILRGEVSGSDNVLVVGLGPVGMMAMMLAKGRGAKRIIGVDMLPERLAMAKQLGVMDHGYLATTEGLPQIIAELTHGGADVALDCSGNAAGRLLALQSTADWGRVVYIGETGKVEFEVSADLMHHQRRIIGSWVTSLFHMEKCAHDLTDWKLWPRNAITHRFSLEQAGDAYALMASGKCGKVVINFPD", - "protein_translation_length": 353, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130471" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77315" - ], - [ - "gene_synonym", - "yphD" - ], - [ - "gene_synonym", - "NP_417041.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008373" - ], - [ - "gene_synonym", - "ECK2543" - ], - [ - "gene_synonym", - "GeneID:949063" - ], - [ - "gene_synonym", - "EcoGene:EG13465" - ], - [ - "gene_synonym", - "JW2530" - ], - [ - "gene_synonym", - "b2546" - ] - ], - "dna_sequence": "ATGTCTGCTTCGTCATTACCATTGCCGCAGGGCAAGAGCGTCTCGCTCAAACAATTTGTCAGTCGCCATATTAATGAGATCGGTTTGCTGGTGGTGATTGCCATTCTTTATCTGGTCTTCTCCCTGAACGCGCCTGGCTTTATCTCATTGAATAACCAGATGAACGTGCTGCGCGATGCCGCCACCATTGGGATTGCCGCCTGGGCGATGACGCTGATTATTATCTCCGGTGAAATTGATGTCAGCGTTGGGCCGATGGTGGCTTTTGTCTCGGTGTGCCTGGCATTTTTGCTGCAATTTGAAGTTCCGCTGGCGGTGGCGTGCCTGCTGGTGTTGCTGTTAGGCGCGCTGATGGGAACGCTGGCCGGGGTGCTGCGCGGCGTGTTTAATGTACCAAGTTTCGTTGCCACACTGGGGCTGTGGAGCGCCCTGCGCGGAATGGGGCTGTTTATGACGAACGCACTGCCAGTGCCGATTGATGAAAACGAGGTGCTGGACTGGCTGGGCGGACAATTTCTCGGTGTGCCGGTATCCGCGCTGATCATGATTGTGTTGTTTGCGCTGTTTGTGTTCATCAGCCGCAAAACCGCCTTCGGGCGCTCGGTTTTTGCCGTTGGCGGTAATGCTACGGCGGCGCAGTTGTGCGGCATCAACGTTCGTCGGGTGCGCATTCTTATCTTTACCCTTTCGGGATTATTAGCGGCGGTGACCGGCATTTTGTTGGCGGCGCGCCTCGGTTCTGGTAACGCAGGTGCCGCAAACGGTCTGGAGTTTGACGTCATCGCCGCGGTCGTGGTCGGCGGTACGGCACTTTCCGGCGGTCGCGGTTCCCTGTTCGGTACATTGCTTGGTGTGCTGGTGATTACGCTAATCGGTAACGGTCTGGTGCTGCTCGGTATTAACTCCTTTTTCCAGCAGGTGGTACGCGGCGTCATCATCGTGGTGGCGGTGCTGGCGAATATCTTGCTGACCCAGCGAAGCAGTAAAGCGAAACGCTAA", - "dna_sequence_length": 999, - "functions": [ - "putative sugar ABC transporter permease" - ], - "id": "CDS_2529", - "location": [ - [ - "NC_000913", - 2676825, - "-", - 999 - ] - ], - "md5": "9a03144075b60cad635fc3de321c9c88", - "parent_gene": "", - "protein_md5": "60641f629888667b5b1346e1f87fde86", - "protein_translation": "MSASSLPLPQGKSVSLKQFVSRHINEIGLLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFEVPLAVACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALRGMGLFMTNALPVPIDENEVLDWLGGQFLGVPVSALIMIVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQVVRGVIIVVAVLANILLTQRSSKAKR", - "protein_translation_length": 332, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948990" - ], - [ - "gene_synonym", - "ASAP:ABE-0008376" - ], - [ - "gene_synonym", - "yphE" - ], - [ - "gene_synonym", - "GI:16130472" - ], - [ - "gene_synonym", - "EcoGene:EG13466" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77509" - ], - [ - "gene_synonym", - "ECK2544" - ], - [ - "gene_synonym", - "NP_417042.1" - ], - [ - "gene_synonym", - "JW2531" - ], - [ - "gene_synonym", - "b2547" - ] - ], - "dna_sequence": "ATGTTCACGGCAACAGAGGCAGTCCCGGTAGCAAAAGTGGTGGCAGGAAATAAGCGTTATCCCGGCGTCGTTGCGCTGGATAACGTTAACTTCACGCTCAATAAAGGCGAAGTTCGTGCGCTGTTAGGTAAAAACGGCGCGGGCAAATCGACTCTCATTCGAATGCTTACCGGCAGCGAACGCCCGGATAGCGGTGATATCTGGATTGGCGAGACGCGACTGGAAGGTGACGAAGCTACGCTGACTCGCCGTGCCGCTGAACTGGGGGTGCGCGCGGTTTATCAGGAGTTAAGTCTGGTGGAAGGGCTGACAGTGGCGGAAAACCTCTGCCTCGGTCAGTGGCCCCGCCGCAACGGCATGATTGATTACCTGCAAATGGCGCAGGATGCCCAACGTTGCTTACAGGCGCTGGGCGTTGACGTTAGTCCTGAACAACTTGTTTCAACGCTAAGCCCGGCGCAAAAGCAGCTGGTGGAAATTGCGCGGGTGATGAAGGGCGAGCCGCGCGTGGTCATTCTTGATGAACCTACCAGTTCGCTTGCGAGTGCGGAAGTTGAACTGGTGATCAGCGCGGTGAAAAAGATGTCGGCACTGGGCGTGGCGGTGATTTATGTCAGCCACCGGATGGAAGAAATTCGCCGCATTGCCTCCTGTGCCACCGTTATGCGCGATGGTCAGGTGGCGGGCGATGTGATGCTCGAAAACACCTCCACGCATCATATTGTGTCGCTGATGCTCGGGCGCGATCACGTTGATATTGCGCCGGTAGCCCCTCAGGAAATTGTGGATCAGGCCGTGCTGGAAGTCCGTGCGTTACGCCATAAGCCCAAGCTGGAGGATATCAGTTTTACGCTACGTCGTGGCGAAGTGCTCGGCATTGCTGGTCTGCTGGGGGCAGGGCGCAGTGAATTGCTGAAGGCGATTGTTGGGCTGGAGGAGTATGAACAGGGCGAAATTGTTATCAACGGCGAGAAAATCACGCGCCCCGATTACGGCGACATGCTGAAACGCGGCATTGGCTATACGCCAGAAAACCGCAAAGAAGCGGGGATCATTCCCTGGTTGGGCGTTGACGAAAATACAGTGCTGACCAATCGGCAAAAAATCAGCGCCAACGGTGTGCTGCAATGGTCCACCATCCGCCGCCTGACCGAAGAGGTGATGCAGCGGATGACGGTCAAGGCCGCCAGTAGCGAAACACCCATCGGCACGCTTTCTGGTGGCAATCAGCAAAAAGTGGTGATCGGTCGTTGGGTCTATGCTGCCAGCCAGATTTTGTTGCTCGACGAGCCAACGCGCGGCGTCGATATCGAAGCCAAACAGCAGATTTACCGTATTGTCCGTGAGCTGGCTGCCGAAGGAAAAAGCGTGGTGTTTATCTCCAGTGAAGTGGAGGAGTTGCCGCTGGTGTGTGACCGCATCCTGTTATTACAGCACGGCACGTTCTCGCAGGAGTTTCACGCTCCGGTCAATGTGGATGAGCTGATGTCCGCCATTCTGTCTGTGCACTGA", - "dna_sequence_length": 1512, - "functions": [ - "putative sugar ABC transporter ATPase" - ], - "id": "CDS_2530", - "location": [ - [ - "NC_000913", - 2678361, - "-", - 1512 - ] - ], - "md5": "de039a03f219b7d964de07c201f5719c", - "parent_gene": "", - "protein_md5": "f70b35a91014429c50b39103afb4ac29", - "protein_translation": "MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGKNGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEGLTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEIARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASCATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKPKLEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLEEYEQGEIVINGEKITRPDYGDMLKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKISANGVLQWSTIRRLTEEVMQRMTVKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVRELAAEGKSVVFISSEVEELPLVCDRILLLQHGTFSQEFHAPVNVDELMSAILSVH", - "protein_translation_length": 503, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77269" - ], - [ - "gene_synonym", - "ASAP:ABE-0008378" - ], - [ - "gene_synonym", - "GeneID:947020" - ], - [ - "gene_synonym", - "yphF" - ], - [ - "gene_synonym", - "b2548" - ], - [ - "gene_synonym", - "GI:16130473" - ], - [ - "gene_synonym", - "EcoGene:EG13467" - ], - [ - "gene_synonym", - "ECK2545" - ], - [ - "gene_synonym", - "NP_417043.1" - ], - [ - "gene_synonym", - "JW2532" - ] - ], - "dna_sequence": "ATGCCTACAAAAATGAGAACAACCCGTAATCTATTATTAATGGCTACGCTATTAGGTAGCGCACTATTTGCCAGGGCTGCGGAAAAAGAAATGACCATTGGCGCAATATACCTTGATACTCAGGGATACTACGCTGGAGTGCGTCAGGGCGTTCAGGATGCGGCAAAAGATTCCTCAGTACAAGTTCAGTTAATAGAAACTAACGCCCAGGGTGATATTTCGAAAGAAAGTACCTTTGTTGATACCCTCGTGGCGCGTAATGTCGATGCCATTATTTTATCGGCAGTGTCTGAAAATGGCAGTAGCCGTACCGTTCGTCGCGCCAGTGAAGCGGGCATTCCGGTGATTTGCTACAACACCTGTATTAATCAAAAGGGGGTCGATAAATATGTCTCGGCGTATCTGGTCGGCGATCCGCTGGAATTTGGTAAAAAACTGGGTAACGCTGCCGCTGATTATTTTATTGCCAATAAAATTGACCAGCCGAAAATTGCCGTCATCAATTGCGAAGCCTTTGAAGTTTGTGTGCAGCGACGTAAAGGATTTGAAGAAGTTTTAAAATCCCGCGTTCCCGGCGCGCAAATTGTCGCTAATCAGGAAGGGACTGTTTTAGATAAAGCGATTTCCGTTGGTGAAAAACTAATTATCTCCACGCCGGATCTCAACGCCATTATGGGGGAATCGGGCGGTGCGACACTCGGCGCGGTAAAAGCGGTACGTAATCAAAATCAGGCCGGAAAAATTGCTGTTTTCGGTTCGGATATGACAACCGAAATTGCTCAGGAGCTGGAAAACAATCAGGTGCTGAAAGCGGTAGTGGATATTTCCGGTAAGAAAATGGGCAATGCTGTTTTCGCGCAAACATTGAAGGTTATCAATAAACAAGCCGACGGTGAAAAAGTGATTCAGGTGCCTATCGATCTCTATACCAAAACGGAAGACGGTAAACAGTGGCTGGCAACGCACGTTGATGGTCTGCCCTAA", - "dna_sequence_length": 984, - "functions": [ - "putative sugar ABC transporter periplasmic binding protein" - ], - "id": "CDS_2531", - "location": [ - [ - "NC_000913", - 2679367, - "-", - 984 - ] - ], - "md5": "50be0e2b4f4f793b68b0bc529e9f807d", - "parent_gene": "", - "protein_md5": "d2d4694791945a7992117e83cca3474d", - "protein_translation": "MPTKMRTTRNLLLMATLLGSALFARAAEKEMTIGAIYLDTQGYYAGVRQGVQDAAKDSSVQVQLIETNAQGDISKESTFVDTLVARNVDAIILSAVSENGSSRTVRRASEAGIPVICYNTCINQKGVDKYVSAYLVGDPLEFGKKLGNAAADYFIANKIDQPKIAVINCEAFEVCVQRRKGFEEVLKSRVPGAQIVANQEGTVLDKAISVGEKLIISTPDLNAIMGESGGATLGAVKAVRNQNQAGKIAVFGSDMTTEIAQELENNQVLKAVVDISGKKMGNAVFAQTLKVINKQADGEKVIQVPIDLYTKTEDGKQWLATHVDGLP", - "protein_translation_length": 327, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:162135907" - ], - [ - "gene_synonym", - "GeneID:947021" - ], - [ - "gene_synonym", - "NP_417044.4" - ], - [ - "gene_synonym", - "yphG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76585" - ], - [ - "gene_synonym", - "JW5405" - ], - [ - "gene_synonym", - "b2549" - ], - [ - "gene_synonym", - "ECK2546" - ], - [ - "gene_synonym", - "EcoGene:EG13468" - ], - [ - "gene_synonym", - "ASAP:ABE-0008380" - ] - ], - "dna_sequence": "ATGACTCCAGTAAAAGTGTGGCAAGAGCGCGTTGAGATCCCGACCTATGAAACCGGGCCGCAGGATATACATCCCATGTTCCTGGAAAATCGCGTTTATCAGGGATCGTCCGGCGCGGTTTATCCCTACGGCGTGACCGATACGCTGAGCGAGCAGAAAACCCTGAAATCCTGGCAGGCGGTGTGGCTGGAAAACGACTACATCAAAGTGATGATCCTGCCGGAACTGGGCGGTCGGGTGCATCGCGCGTGGGATAAAGTGAAACAGCGCGATTTTGTTTATCACAATGAAGTCATTAAACCTGCGCTGGTGGGGCTGCTGGGGCCGTGGATTTCCGGTGGGATTGAGTTTAACTGGCCGCAACATCATCGCCCGACCACCTTTATGCCCGTTGATTTCACCCTCGAAGCCCATGAAGACGGTGCACAGACGGTGTGGGTAGGCGAAACGGAGCCGATGCATGGTTTACAGGTGATGACAGGTTTCACCCTGCGCCCTGACCGGGCGGCGCTGGAAATCGCCAGCCGCGTCTATAACGGGAACGCCACGCCGCGTCATTTCTTGTGGTGGGCCAACCCGGCAGTGAAAGGGGGGGAAGGGCATCAGAGCGTCTTCCCGCCGGATGTAACGGCGGTGTTTGATCACGGCAAACGGGCCGTCTCCGCTTTCCCCATCGCTACCGGCACTTACTACAAAGTGGACTACTCCGCTGGAGTGGACATTTCTCGCTATAAAAATGTGCCTGTTCCAACCTCATATATGGCCGAAAAATCGCAGTACGATTTTGTCGGCGCGTGGTGTCACGATGAAGATGGCGGTTTGCTGCACGTTGCCAACCACCATATTGCGCCAGGTAAAAAACAGTGGAGTTGGGGACACAGTGAATTTGGCCAGGCGTGGGATAAGAGTCTGACCGACAATAACGGCCCGTATATCGAACTGATGACCGGTATTTTTGCCGATAACCAGCCCGATTTTACCTGGCTTGATGCTTACGAAGAGAAGCGTTTTGAGCAGTATTTCCTGCCTTATCATTCTTTGGGCATGGTGCAAAATGCCTCCCGCGATGCGGTGATAAAACTCCAGCGTAGTAAGCGGGGGATTGAGTGGGGGCTGTATGCCATCTCTCCGTTGAACGGATACCGCCTGGCGATCCGCGAAATCGGTAAATGCAACGCGTTACTTGATGATGCCGTGGCACTGATGCCTGCGACCGCCATCCAGGGCGTGTTGCACGGTATCAATCCTGAAAGGCTGACCATTGAGCTCTCCGATGCCGACGGCAATATTGTACTGAGTTATCAGGAACATCAGCCGCAAGCGTTGCCGTTACCGGACGTCGCCAAAGCGCCACTGGCAGCACAAGACATTACCAGTACAGATGAAGCCTGGTTTATCGGTCAGCATCTGGAGCAATATCATCACGCCAGCCGTTCACCGTTCGATTACTACCTGCGCGGCGTGGCGCTGGACCCGCTGGATTATCGCTGTAACCTGGCGCTGGCGATGCTGGAATATAACCGCGCAGATTTCCCGCAAGCGGTGGCGTATGCCACTCAGGCTCTGAAACGCGCACATGCGCTGAACAAAAATCCGCAGTGCGGACAGGCGAGTTTGATTCGCGCCAGTGCTTACGAACGTCAGGGACAATATCAACAAGCCGAAGAGGATTTCTGGCGTGCGGTCTGGAGCGGCAACAGCAAAGCCGGTGGCTATTATGGCCTGGCACGACTGGCGGCGCGTAATGGTAACTTCGACGCTGGTCTGGATTTTTGCCAACAAAGTCTTCGCGCCTGCCCAACCAATCAGGAAGTGCTTTGCCTGCATAATCTGCTGCTGGTGTTAAGTGGTCGTCAGGACAACGCGCGTGTGCAGCGCGAGAAACTGCTGCGCGATTATCCGCTGAACGCCACTCTGTGGTGGCTGAACTGGTTCGATGGTCGTAGCGAATCAGCTCTCGCGCAGTGGCGCGGTCTGTGTCAGGGACGCGACGTTAACGCCCTGATGACCGCCGGGCAACTGATTAACTGGGGAATGCCCACCCTGGCGGCAGAGATGCTGAACGCACTGGACTGCCAGCGCACGCTGCCGCTTTACCTGCAAGCCAGCTTGCTGCCGAAAGCCGAACGTGGCGAACTGGTCGCAAAAGCCATTGATGTCTTCCCGCAGTTTGTCCGTTTCCCGAATACGCTGGAAGAAGTGGCGGCGCTGGAGAGTATTGAAGAGTGCTGGTTTGCTCGCCATTTACTAGCTTGCTTCTACTACAACAAACGTAGCTACAACAAAGCCATTGCCTTTTGGCAACGTTGCGTAGAGATGTCGCCGGAGTTTGCCGACGGCTGGCGCGGGTTAGCGATCCATGCGTGGAATAAGCAACACGATTATGAGCTGGCCGCGCGTTATCTTGATAATGCTTATCAGCTTGCGCCGCAGGATGCACGTCTGCTTTTCGAACGGGATTTGCTGGATAAGTTAAGTGGAGCCACACCGGAGAAACGACTGGCGCGTCTGGAAAATAATCTGGAAATTGCGCTGAAACGCGACGACATGACCGCAGAACTGCTCAATTTGTGGCATCTCACGGGTCAGGCAGACAAAGCGGCGGACATTCTCGCCACGCGCAAATTCCACCCGTGGGAAGGCGGGGAAGGGAAGGTCACCAGTCAGTTTATCCTCAACCAGTTATTACGCGCCTGGCAGCATCTTGATGCCAGACAGCCGCAGCAGGCCTGCGAACTGCTTCATGCCGCGCTGCATTATCCGGAGAATTTAAGCGAAGGCCGTTTACCGGGGCAAACTGATAACGACATCTGGTTCTGGCAGGCGATATGCGCCAACGCGCAGGGCGATGAAACTGAAGCGACGCGTTGTTTACGTCTGGCGGCGACCGGCGATCGCACTATTAACATTCACAGTTATTACAACGATCAGCCGGTTGATTATCTCTTCTGGCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAACAGTGGGCGCAAGAGATGGCGAAAACCAGTATCGAAGCGGATTTCTTTGCCGTCTCGCAACCTGACTTGTTGTCGCTGTATGGCGATTTACAACAGCAGCATAAAGAAAAATGCCTGATGGTGGCGATGCTGGCGTCCGCGGGACTCGGGGAGGTTGCGCAATATGAGTCTGCTCGCGCTGAATTGACGGCGATTAATCCGGCTTGGCCGAAAGCGGCATTATTCACCACCGTGATGCCTTTTATTTTTAACCGCGTTCACTAA", - "dna_sequence_length": 3282, - "functions": [ - "DUF4380 domain-containing TPR repeat protein" - ], - "id": "CDS_2532", - "location": [ - [ - "NC_000913", - 2682745, - "-", - 3282 - ] - ], - "md5": "bb8ec88972c7d343e307b5fd00c095ff", - "parent_gene": "", - "protein_md5": "448022546ad9ab25f215107f6e3d10d0", - "protein_translation": "MTPVKVWQERVEIPTYETGPQDIHPMFLENRVYQGSSGAVYPYGVTDTLSEQKTLKSWQAVWLENDYIKVMILPELGGRVHRAWDKVKQRDFVYHNEVIKPALVGLLGPWISGGIEFNWPQHHRPTTFMPVDFTLEAHEDGAQTVWVGETEPMHGLQVMTGFTLRPDRAALEIASRVYNGNATPRHFLWWANPAVKGGEGHQSVFPPDVTAVFDHGKRAVSAFPIATGTYYKVDYSAGVDISRYKNVPVPTSYMAEKSQYDFVGAWCHDEDGGLLHVANHHIAPGKKQWSWGHSEFGQAWDKSLTDNNGPYIELMTGIFADNQPDFTWLDAYEEKRFEQYFLPYHSLGMVQNASRDAVIKLQRSKRGIEWGLYAISPLNGYRLAIREIGKCNALLDDAVALMPATAIQGVLHGINPERLTIELSDADGNIVLSYQEHQPQALPLPDVAKAPLAAQDITSTDEAWFIGQHLEQYHHASRSPFDYYLRGVALDPLDYRCNLALAMLEYNRADFPQAVAYATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLARLAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRDYPLNATLWWLNWFDGRSESALAQWRGLCQGRDVNALMTAGQLINWGMPTLAAEMLNALDCQRTLPLYLQASLLPKAERGELVAKAIDVFPQFVRFPNTLEEVAALESIEECWFARHLLACFYYNKRSYNKAIAFWQRCVEMSPEFADGWRGLAIHAWNKQHDYELAARYLDNAYQLAPQDARLLFERDLLDKLSGATPEKRLARLENNLEIALKRDDMTAELLNLWHLTGQADKAADILATRKFHPWEGGEGKVTSQFILNQLLRAWQHLDARQPQQACELLHAALHYPENLSEGRLPGQTDNDIWFWQAICANAQGDETEATRCLRLAATGDRTINIHSYYNDQPVDYLFWQGMALRLLGEQQTAQQLFSEMKQWAQEMAKTSIEADFFAVSQPDLLSLYGDLQQQHKEKCLMVAMLASAGLGEVAQYESARAELTAINPAWPKAALFTTVMPFIFNRVH", - "protein_translation_length": 1093, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111457" - ], - [ - "gene_synonym", - "GeneID:947023" - ], - [ - "gene_synonym", - "NP_417045.4" - ], - [ - "gene_synonym", - "yphH" - ], - [ - "gene_synonym", - "JW5406" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76586" - ], - [ - "gene_synonym", - "ECK2547" - ], - [ - "gene_synonym", - "EcoGene:EG13469" - ], - [ - "gene_synonym", - "ASAP:ABE-0008384" - ], - [ - "gene_synonym", - "b2550" - ] - ], - "dna_sequence": "ATGAGAGCCTGCATTAATAATCAACAGATTCGCCACCATAACAAATGCGTGATTCTGGAACTGCTGTACCGGCAAAAGCGCGCCAATAAATCAACGCTGGCCCGGCTGGCGCAAATTTCGATTCCGGCAGTCAGTAATATTTTGCAGGAACTGGAAAGCGAAAAACGGGTGGTGAATATTGACGATGAAAGCCAGACGCGCGGGCATAGTAGCGGTACATGGCTGATTGCGCCGGAAGGTGACTGGACGCTGTGCCTGAACGTGACGCCCACCAGTATTGAGTGTCAGGTTGCTAATGCTTGTTTAAGTCCGAAAGGTGAATTTGAGTATTTACAGATTGATGCACCGACGCCGCAGGCGCTGCTGTCCGAAATCGAAAAATGCTGGCATCGCCACCGTAAATTGTGGCCGGACCATACCATCAACCTGGCGTTGGCAATCCACGGTCAGGTTGATCCTGTGACCGGCGTGTCGCAAACCATGCCGCAAGCGCCGTGGACAACGCCGGTGGAGGTGAAATATCTGCTGGAAGAGAAGCTCGGCATTCGGGTGATGGTCGATAATGACTGCGTGATGCTGGCGCTGGCGGAGAAATGGCAAAATAATTCGCAGGAACGGGATTTCTGCGTGATCAACGTTGATTACGGCATTGGCTCGTCGTTCGTGATTAACGAGCAAATTTATCGCGGCAGTTTGTATGGTAGCGGACAGATTGGTCACACCATCGTTAATCCGGATGGCGTCGTCTGCGACTGTGGACGTTATGGCTGCCTGGAAACTGTCGCCTCGTTAAGCGCATTAAAAAAACAGGCGCGGGTATGGCTAAAATCACAACCGGTTAGTACTCAACTTGATCCTGAAAAACTGACTACAGCGCAGTTAATCGCTGCCTGGCAAAGTGGAGAACCGTGGATCACCAGCTGGGTTGATCGCTCTGCCAATGCCATTGGTTTGAGTCTGTATAACTTCCTCAACATCCTCAATATTAATCAGATTTGGTTGTACGGTCGCAGTTGTGCCTTTGGTGAGAACTGGCTTAATACTATTATTCGCCAGACAGGATTTAACCCGTTCGACCGCGACGAAGGACCGAGCGTGAAAGCGACGCAAATTGGCTTTGGGCAATTAAGCCGCGCACAACAGGTGCTGGGAATTGGCTATTTGTATGTTGAGGCGCAGTTACGACAGATTTGA", 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], - [ - "gene_synonym", - "ASAP:ABE-0008389" - ], - [ - "gene_synonym", - "GI:16130476" - ], - [ - "gene_synonym", - "JW2535" - ], - [ - "gene_synonym", - "ECK2548" - ], - [ - "gene_synonym", - "b2551" - ], - [ - "gene_synonym", - "NP_417046.1" - ] - ], - "dna_sequence": "ATGTTAAAGCGTGAAATGAACATTGCCGATTATGATGCCGAACTGTGGCAGGCTATGGAGCAGGAAAAAGTACGTCAGGAAGAGCACATCGAACTGATCGCCTCCGAAAACTACACCAGCCCGCGCGTAATGCAGGCGCAGGGTTCTCAGCTGACCAACAAATATGCTGAAGGTTATCCGGGCAAACGCTACTACGGCGGTTGCGAGTATGTTGATATCGTTGAACAACTGGCGATCGATCGTGCGAAAGAACTGTTCGGCGCTGACTACGCTAACGTCCAGCCGCACTCCGGCTCCCAGGCTAACTTTGCGGTCTACACCGCGCTGCTGGAACCAGGTGATACCGTTCTGGGTATGAACCTGGCGCATGGCGGTCACCTGACTCACGGTTCTCCGGTTAACTTCTCCGGTAAACTGTACAACATCGTTCCTTACGGTATCGATGCTACCGGTCATATCGACTACGCCGATCTGGAAAAACAAGCCAAAGAACACAAGCCGAAAATGATTATCGGTGGTTTCTCTGCATATTCCGGCGTGGTGGACTGGGCGAAAATGCGTGAAATCGCTGACAGCATCGGTGCTTACCTGTTCGTTGATATGGCGCACGTTGCGGGCCTGGTTGCTGCTGGCGTCTACCCGAACCCGGTTCCTCATGCTCACGTTGTTACTACCACCACTCACAAAACCCTGGCGGGTCCGCGCGGCGGCCTGATCCTGGCGAAAGGTGGTAGCGAAGAGCTGTACAAAAAACTGAACTCTGCCGTTTTCCCTGGTGGTCAGGGCGGTCCGTTGATGCACGTAATCGCCGGTAAAGCGGTTGCTCTGAAAGAAGCGATGGAGCCTGAGTTCAAAACTTACCAGCAGCAGGTCGCTAAAAACGCTAAAGCGATGGTAGAAGTGTTCCTCGAGCGCGGCTACAAAGTGGTTTCCGGCGGCACTGATAACCACCTGTTCCTGGTTGATCTGGTTGATAAAAACCTGACCGGTAAAGAAGCAGACGCCGCTCTGGGCCGTGCTAACATCACCGTCAACAAAAACAGCGTACCGAACGATCCGAAGAGCCCGTTTGTGACCTCCGGTATTCGTGTAGGTACTCCGGCGATTACCCGTCGCGGCTTTAAAGAAGCCGAAGCGAAAGAACTGGCTGGCTGGATGTGTGACGTGCTGGACAGCATCAATGATGAAGCCGTTATCGAGCGCATCAAAGGTAAAGTTCTCGACATCTGCGCACGTTACCCGGTTTACGCATAA", 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"gene_synonym", - "NP_417047.1" - ], - [ - "gene_synonym", - "fsrB" - ], - [ - "gene_synonym", - "GI:16130477" - ], - [ - "gene_synonym", - "ASAP:ABE-0008396" - ], - [ - "gene_synonym", - "ECK2549" - ], - [ - "gene_synonym", - "JW2536" - ], - [ - "gene_synonym", - "b2552" - ], - [ - "gene_synonym", - "EcoGene:EG10456" - ] - ], - "dna_sequence": "ATGCTTGACGCTCAAACCATCGCTACAGTAAAAGCCACCATCCCTTTACTGGTGGAAACGGGGCCAAAGTTAACCGCCCATTTCTACGACCGTATGTTTACTCATAACCCAGAACTCAAAGAAATTTTTAACATGAGTAACCAGCGTAATGGCGATCAACGTGAAGCCCTGTTTAACGCTATTGCCGCCTACGCCAGTAATATTGAAAACCTGCCTGCGCTGCTGCCAGCGGTAGAAAAAATCGCGCAGAAGCACACCAGCTTCCAGATCAAACCGGAACAGTACAACATCGTCGGTGAACACCTGTTGGCAACGCTGGACGAAATGTTCAGCCCGGGGCAGGAAGTGCTGGACGCGTGGGGTAAAGCCTATGGTGTACTGGCTAATGTATTTATCAATCGCGAGGCGGAAATCTATAACGAAAACGCCAGCAAAGCCGGTGGTTGGGAAGGTACTCGCGATTTCCGCATTGTGGCTAAAACACCGCGCAGCGCGCTTATCACCAGCTTCGAACTGGAGCCGGTCGACGGTGGCGCAGTGGCAGAATACCGTCCGGGGCAATATCTCGGCGTCTGGCTGAAGCCGGAAGGTTTCCCACATCAGGAAATTCGTCAGTACTCTTTGACTCGCAAACCGGATGGCAAAGGCTATCGTATTGCGGTGAAACGCGAAGAGGGTGGGCAGGTATCCAACTGGTTGCACAATCACGCCAATGTTGGCGATGTCGTGAAACTGGTCGCTCCGGCAGGTGATTTCTTTATGGCTGTCGCAGATGACACACCAGTGACGTTAATCTCTGCCGGTGTTGGTCAAACGCCAATGCTGGCAATGCTCGACACGCTGGCAAAAGCAGGCCACACAGCACAAGTGAACTGGTTCCATGCGGCAGAAAATGGCGATGTTCACGCCTTTGCCGATGAAGTTAAGGAACTGGGGCAGTCACTGCCGCGCTTTACCGCGCACACCTGGTATCGTCAGCCGAGCGAAGCCGATCGCGCTAAAGGTCAGTTTGATAGCGAAGGTCTGATGGATTTGAGCAAACTGGAAGGTGCGTTCAGCGATCCGACAATGCAGTTCTATCTCTGCGGCCCGGTTGGCTTCATGCAGTTTACCGCGAAACAGTTAGTGGATCTGGGCGTGAAGCAGGAAAACATTCATTACGAATGCTTTGGCCCGCATAAGGTGCTGTAA", - "dna_sequence_length": 1191, - "functions": [ - "fused nitric oxide dioxygenase/dihydropteridine reductase 2" - ], - "id": "CDS_2535", - "location": [ - [ - "NC_000913", - 2685835, - "+", - 1191 - ] - ], - "md5": "8e03c1cb5b2922529efc1264612191fe", - "parent_gene": "", - "protein_md5": "90ba0f935607a918dd3c749f201a1492", - "protein_translation": "MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFNMSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHLLATLDEMFSPGQEVLDAWGKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAKGQFDSEGLMDLSKLEGAFSDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIHYECFGPHKVL", - "protein_translation_length": 396, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9Z1" - ], - [ - "gene_synonym", - "glnB" - ], - [ - "gene_synonym", - "GeneID:947016" - ], - [ - "gene_synonym", - "ECK2550" - ], - [ - "gene_synonym", - "NP_417048.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008398" - ], - [ - "gene_synonym", - "GI:16130478" - ], - [ - "gene_synonym", - "JW2537" - ], - [ - "gene_synonym", - "b2553" - ], - [ - "gene_synonym", - "EcoGene:EG10384" - ] - ], - "dna_sequence": "ATGAAAAAGATTGATGCGATTATAAAACCCTTCAAGCTGGACGATGTCCGCGAAGCACTGGCCGAAGTCGGTATTACCGGCATGACGGTGACCGAAGTGAAAGGCTTTGGTCGCCAGAAAGGCCATACCGAGCTGTACCGCGGCGCGGAGTATATGGTGGATTTTCTGCCGAAAGTGAAAATTGAGATTGTCGTACCGGACGACATTGTCGATACCTGTGTCGATACCATTATTCGCACGGCGCAAACCGGCAAAATCGGTGACGGTAAAATCTTCGTCTTTGACGTGGCACGGGTCATTCGCATCCGTACCGGTGAAGAGGACGACGCGGCAATTTAA", - "dna_sequence_length": 339, - "functions": [ - "regulatory protein P-II for glutamine synthetase" - ], - "id": "CDS_2536", - "location": [ - [ - "NC_000913", - 2687408, - "-", - 339 - ] - ], - "md5": "05ef063a6973bbf0de8f85d2185731bc", - "parent_gene": "", - "protein_md5": "8ceb698f0aa0b9491fc60d01c78bde64", - "protein_translation": "MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAAI", - "protein_translation_length": 112, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008400" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFU4" - ], - [ - "gene_synonym", - "yfhA" - ], - [ - "gene_synonym", - "qseF" - ], - [ - "gene_synonym", - "ECK2551" - ], - [ - "gene_synonym", - "NP_417049.1" - ], - [ - "gene_synonym", - "JW2538" - ], - [ - "gene_synonym", - "GeneID:947042" - ], - [ - "gene_synonym", - "GI:16130479" - ], - [ - "gene_synonym", - "b2554" - ], - [ - "gene_synonym", - "EcoGene:EG11285" - ], - [ - "gene_synonym", - "glrR" - ] - ], - "dna_sequence": "ATGAGCCATAAACCTGCGCATTTATTATTGGTCGATGACGATCCGGGATTGCTGAAACTGCTTGGCCTGCGCCTGACCAGCGAAGGCTACAGTGTGGTCACGGCGGAAAGTGGCGCTGAAGGATTACGGGTACTGAATCGCGAAAAAGTAGATTTAGTCATCAGCGACCTGCGGATGGATGAAATGGACGGTATGCAGCTGTTTGCTGAAATCCAGAAAGTGCAGCCGGGAATGCCGGTAATTATTCTTACCGCGCATGGTTCTATTCCCGATGCCGTTGCTGCAACACAGCAGGGCGTTTTTAGTTTCCTCACCAAGCCTGTCGACAAAGACGCGCTATATCAGGCAATTGACGATGCGCTGGAGCAATCCGCGCCAGCCACCGATGAACGCTGGCGCGAGGCAATTGTCACCCGCAGCCCGCTGATGCTGCGTTTGCTGGAACAGGCGCGGCTGGTGGCGCAATCAGACGTCAGCGTTTTGATTAACGGTCAGAGCGGCACCGGGAAAGAGATTTTCGCCCAGGCTATCCACAACGCCAGCCCGCGCAACAGCAAACCATTTATTGCTATTAACTGTGGCGCATTGCCCGAGCAATTGCTGGAGTCGGAGCTGTTTGGTCATGCGCGTGGCGCGTTTACTGGCGCTGTCAGCAATCGCGAAGGTTTATTCCAGGCGGCGGAAGGCGGAACGCTATTTCTCGATGAAATTGGCGATATGCCTGCGCCGTTACAGGTCAAACTGCTGCGCGTGTTGCAGGAGCGTAAAGTGCGCCCGCTGGGCAGTAACCGCGATATTGATATCAATGTGCGGATTATTTCTGCCACTCACCGTGATCTGCCAAAAGCGATGGCGCGCGGGGAATTCCGCGAAGATCTCTATTACCGCCTCAACGTTGTCAGCCTGAAAATTCCGGCACTGGCGGAGCGCACAGAAGACATTCCGCTACTGGCAAATCACCTGTTGCGCCAGGCGGCAGAGCGACATAAACCGTTTGTCCGCGCGTTCTCTACCGATGCGATGAAACGCCTGATGACCGCGAGCTGGCCGGGTAATGTGCGCCAGTTGGTCAACGTGATTGAACAGTGCGTGGCGCTGACCTCATCTCCGGTGATTAGTGATGCGCTGGTGGAGCAGGCGCTGGAGGGTGAAAATACGGCGCTGCCAACCTTTGTTGAGGCACGTAATCAGTTTGAACTCAACTATTTGCGTAAGCTGCTGCAAATCACCAAAGGCAACGTCACCCACGCGGCGAGAATGGCGGGGCGCAACCGGACAGAATTTTATAAACTGCTTTCCCGACACGAGCTGGATGCAAACGATTTCAAGGAATGA", 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- "gene_synonym", - "qseG" - ], - [ - "gene_synonym", - "ECK2552" - ], - [ - "gene_synonym", - "yfhG" - ], - [ - "gene_synonym", - "NP_417050.1" - ], - [ - "gene_synonym", - "JW2539" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD44" - ], - [ - "gene_synonym", - "GI:16130480" - ], - [ - "gene_synonym", - "b2555" - ], - [ - "gene_synonym", - "ASAP:ABE-0008405" - ] - ], - "dna_sequence": "ATGCGACACATTTTTCAACGATTATTGCCCCGACGGCTGTGGCTGGCAGGGCTGCCATGTCTGGCATTGCTGGGTTGCGTGCAGAATCACAATAAGCCAGCCATTGATACGCCAGCAGAAGAAAAAATTCCGGTTTATCAACTGGCTGACTATCTTTCTACTGAATGTAGCGACATCTGGGCGCTGCAAGGTAAATCAACCGAAACCAATCCGCTTTACTGGCTGCGGGCGATGGATTGTGCTGATCGTTTAATGCCTGCGCAGTCGCGTCAGCAAGCTCGCCAATATGACGACGGCAGCTGGCAAAATACCTTTAAACAAGGGATTTTGCTCGCCGACGCCAAAATTACGCCGTATGAGCGCCGCCAGCTGGTCGCGCGTATTGAAGCGTTAAGTACCGAGATCCCGGCACAGGTTCGCCCACTGTATCAACTCTGGCGCGATGGTCAGGCGCTGCAACTGCAACTGGCGGAAGAGCGCCAACGTTACAGTAAACTCCAGCAGTCCAGCGACAGCGAGCTGGATACATTGCGCCAGCAACATCACGTTCTACAGCAGCAACTGGAACTCACCACCCGCAAGCTGGAAAACCTGACCGATATTGAACGCCAGCTCTCGACCCGCAAACCGGCTGGAAATTTCTCGCCGGATACGCCGCACGAGAGTGAAAAGCCCGCGCCATCCACCCATGAGGTCACTCCTGATGAGCCATAA", - "dna_sequence_length": 714, - "functions": [ - "putative outer membrane protein modulating the QseEF response" - ], - "id": "CDS_2538", - "location": [ - [ - "NC_000913", - 2689506, - "-", - 714 - ] - ], - "md5": "e91b1fbdc7140c73b2edbee8e0c3eb59", - "parent_gene": "", - "protein_md5": "a54a59fba0ecae64b8ca363a5d808d7e", - "protein_translation": "MRHIFQRLLPRRLWLAGLPCLALLGCVQNHNKPAIDTPAEEKIPVYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGSWQNTFKQGILLADAKITPYERRQLVARIEALSTEIPAQVRPLYQLWRDGQALQLQLAEERQRYSKLQQSSDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDTPHESEKPAPSTHEVTPDEP", - "protein_translation_length": 237, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfhK" - ], - [ - "gene_synonym", - "glrK" - ], - [ - "gene_synonym", - "GeneID:947013" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52101" - ], - [ - "gene_synonym", - "GI:90111458" - ], - [ - "gene_synonym", - "qseE" - ], - [ - "gene_synonym", - "JW5407" - ], - [ - "gene_synonym", - "ASAP:ABE-0008409" - ], - [ - "gene_synonym", - "EcoGene:EG13461" - ], - [ - "gene_synonym", - "ECK2553" - ], - [ - "gene_synonym", - "yfhZ" - ], - [ - "gene_synonym", - "b2556" - ], - [ - "gene_synonym", - "NP_417051.2" - ] - ], - "dna_sequence": "TTGAAACGCTGGCCCGTTTTTCCCCGCTCATTACGACAACTGGTAATGCTGGCATTTTTGCTGATTCTGCTGCCCCTGTTGGTGCTGGCATGGCAAGCCTGGCAAAGCCTGAATGCGCTTAGCGATCAGGCGGCGCTGGTTAACCGCACTACGCTTATTGATGCCCGGCGCAGTGAAGCGATGACCAACGCGGCGCTGGAGATGGAGCGTAGTTACCGTCAGTATTGCGTGCTGGACGACCCAACCCTGGCGAAGGTTTATCAAAGCCAGCGCAAGCGTTACAGCGAAATGCTCGATGCCCACGCAGGCGTGCTGCCGGACGATAAACTCTACCAGGCATTACGTCAGGATTTGCACAATCTGGCTCAACTTCAGTGTAACAACAGCGGTCCCGATGCTGCCGCCGCCGCACGTCTTGAAGCCTTTGCCAGTGCCAATACCGAAATGGTACAGGCCACGCGCACAGTGGTGTTCTCTCGTGGGCAGCAGCTTCAGCGTGAAATCGCCGAACGTGGGCAATATTTTGGTTGGCAATCGCTGGTGCTATTTCTGGTGAGTCTGGTAATGGTACTGCTTTTCACGCGGATGATTATCGGGCCGGTGAAAAATATCGAGCGCATGATCAACCGTCTGGGGGAAGGGCGTTCTCTGGGCAATAGCGTCTCGTTCAGTGGACCGAGCGAGTTACGCTCGGTTGGGCAACGTATTCTTTGGTTAAGTGAGCGCCTGTCATGGCTGGAATCCCAACGCCATCAATTTTTAAGACATTTATCTCATGAATTAAAAACGCCACTGGCGAGTATGCGCGAGGGCACTGAATTACTGGCTGACCAGGTTGTCGGGCCGCTTACGCCAGAGCAAAAAGAGGTGGTGAGCATTCTTGATAGCAGCAGCCGCAATTTGCAAAAACTGATCGAACAACTGCTTGATTACAACCGTAAACAGGCGGACAGTGCGGTGGAACTGGAGAATGTTGAGTTAGCACCGCTGGTGGAGACAGTGGTTTCTGCTCATAGCCTGCCCGCACGGGCTAAAATGATGCATACCGACGTCGATCTCAAAGCAACAGCTTGCCTGGCGGAGCCAATGCTGCTGATGAGCGTACTGGATAATCTTTACTCCAATGCGGTGCACTACGGGGCTGAATCCGGTAACATTTGCCTTCGCAGCAGTTTACATGGTGCGCGGGTTTATATTGATGTCATCAATACAGGCACGCCCATTCCGCAAGAGGAACGCGCCATGATCTTCGAACCCTTTTTTCAGGGAAGCCACCAGCGAAAAGGGGCGGTGAAGGGCAGCGGTCTGGGATTAAGCATTGCCAGGGATTGTATTCGCCGTATGCAAGGGGAACTGTATCTGGTCGACGAGAGCGGGCAAGACGTTTGTTTCCGCATTGAATTACCGTCGTCGAAAAACACGAAATAA", 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"gene_synonym", - "EcoGene:EG10797" - ], - [ - "gene_synonym", - "GI:49176239" - ], - [ - "gene_synonym", - "JW2541" - ], - [ - "gene_synonym", - "YP_026170.1" - ], - [ - "gene_synonym", - "purG" - ], - [ - "gene_synonym", - "ECK2555" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15254" - ], - [ - "gene_synonym", - "b2557" - ], - [ - "gene_synonym", - "ASAP:ABE-0008412" - ], - [ - "gene_synonym", - "purI" - ], - [ - "gene_synonym", - "purL" - ] - ], - "dna_sequence": "ATGATGGAAATTCTGCGTGGTTCGCCTGCACTGTCGGCATTCCGAATCAACAAACTGCTGGCACGTTTTCAGGCTGCCAGGCTCCCGGTTCACAATATTTACGCCGAGTATGTCCATTTTGCTGACCTCAATGCGCCGTTAAACGATGATGAGCACGCACAACTTGAACGCCTGCTGAAATATGGCCCGGCACTCGCCAGCCACGCCCCGCAAGGCAAACTCCTGCTGGTGACCCCGCGTCCTGGCACCATCTCTCCCTGGTCTTCGAAAGCGACCGATATTGCCCATAACTGCGGGCTACAACAGGTAAACCGCCTTGAGCGCGGCGTTGCTTACTATATAGAAGCCGGTACGCTGACCAATGAACAATGGCAGCAGGTTACCGCTGAACTGCACGACCGCATGATGGAAACGGTCTTTTTTGCTTTAGATGATGCAGAGCAGTTGTTTGCCCACCATCAACCGACTCCGGTTACCAGCGTTGATTTGCTGGGGCAGGGCCGTCAGGCGCTGATCGACGCTAACCTGCGTCTTGGCTTGGCTCTGGCGGAAGATGAAATTGACTATCTGCAGGATGCTTTCACAAAGCTTGGTCGTAACCCGAACGACATCGAACTGTATATGTTTGCCCAGGCGAACTCCGAGCACTGCCGCCACAAAATTTTTAACGCCGACTGGGTTATCGATGGTGAACAGCAGCCGAAATCGCTGTTCAAGATGATCAAAAATACTTTCGAAACCACGCCAGATCACGTTCTCTCTGCTTATAAAGATAACGCCGCCGTAATGGAAGGTTCTGAAGTGGGCCGCTACTTTGCTGACCACGAAACGGGCCGCTACGATTTCCATCAGGAACCGGCGCATATTCTGATGAAAGTCGAAACTCACAACCACCCGACGGCGATTTCTCCGTGGCCGGGCGCGGCGACCGGTTCCGGCGGTGAAATCCGCGATGAAGGTGCCACCGGGCGCGGCGCAAAGCCGAAAGCGGGTCTGGTTGGTTTCTCCGTTTCCAACCTGCGAATTCCTGGCTTCGAACAGCCGTGGGAAGAAGATTTCGGTAAGCCTGAGCGCATTGTCACCGCGCTGGACATCATGACCGAAGGCCCGCTGGGCGGCGCGGCGTTTAACAACGAATTTGGTCGTCCGGCACTGAACGGCTACTTCCGTACTTATGAAGAAAAAGTGAACAGCCACAACGGCGAAGAGCTGCGCGGTTATCACAAACCGATCATGCTGGCGGGCGGGATCGGCAACATTCGCGCCGATCACGTACAAAAAGGCGAGATCAACGTCGGTGCGAAGCTGGTCGTTCTCGGCGGCCCGGCAATGAACATCGGTCTTGGCGGTGGTGCAGCGTCTTCTATGGCGTCTGGTCAGTCTGATGCCGACCTCGACTTTGCTTCCGTACAGCGCGACAACCCGGAGATGGAGCGTCGCTGCCAGGAAGTGATCGACCGTTGCTGGCAGCTTGGTGATGCCAACCCAATCCTGTTTATCCACGACGTTGGCGCTGGCGGTCTTTCTAACGCCATGCCGGAACTGGTGAGCGACGGCGGGCGCGGCGGTAAATTTGAACTGCGCGAGATTCTAAGCGACGAACCGGGCATGAGCCCGCTGGAAATCTGGTGTAACGAATCCCAGGAACGCTACGTGCTGGCGGTTGCTGCCGATCAATTACCGCTGTTTGACGAACTGTGTAAGCGTGAGCGCGCACCCTACGCGGTGATTGGTGAAGCGACCGAAGAACTGCATCTTTCTCTGCACGATCGTCATTTTGATAATCAGCCGATCGATCTGCCGCTGGACGTCCTGCTTGGTAAAACGCCGAAGATGACCCGCGATGTACAAACGCTGAAAGCGAAAGGCGACGCGCTGGCCCGTGAAGGGATCACCATTGCAGACGCGGTGAAACGTGTGCTGCATCTGCCGACTGTGGCGGAAAAAACCTTCCTGGTGACCATTGGCGACCGCAGCGTAACCGGCATGGTAGCGCGCGATCAGATGGTGGGGCCGTGGCAGGTGCCGGTCGCTAACTGCGCGGTCACTACCGCCAGCCTCGACAGCTACTACGGTGAAGCGATGGCGATTGGCGAGCGTGCGCCGGTTGCGCTGCTGGATTTCGCCGCCTCTGCCCGTCTGGCGGTCGGTGAAGCGTTAACCAACATCGCCGCAACACAAATTGGCGATATCAAACGCATCAAACTTTCCGCCAACTGGATGGCGGCGGCAGGCCACCCTGGTGAAGATGCGGGCCTGTATGAAGCCGTTAAAGCCGTGGGCGAAGAGCTTTGTCCGGCGCTGGGCCTGACGATCCCGGTGGGTAAAGACTCCATGTCGATGAAAACCCGCTGGCAGGAAGGTAACGAAGAGCGCGAAATGACGTCGCCGCTGTCGCTGGTGATTTCTGCATTTGCCCGCGTGGAAGATGTACGTCACACCATCACGCCGCAGCTTTCTACCGAAGATAACGCACTGCTGCTGATTGATTTGGGCAAAGGCAATAACGCGCTGGGCGCAACGGCGCTGGCGCAGGTTTATCGTCAGCTTGGCGACAAACCGGCAGATGTACGCGATGTCGCGCAACTGAAAGGCTTCTATGACGCGATTCAGGCGCTGGTTGCACAGCGTAAGCTGCTGGCGTATCACGACCGCTCTGATGGCGGCCTGCTGGTAACGCTGGCGGAAATGGCCTTTGCTGGTCATTGTGGCATTGACGCGGATATCGCCACTCTGGGTGACGATCGCCTGGCGGCGTTGTTTAACGAAGAACTGGGTGCGGTGATTCAGGTTCGTGCCGCTGACCGTGAAGCGGTCGAGTCCGTACTGGCACAGCATGGGCTTGCTGATTGTGTCCATTATGTAGGGCAGGCGGTTTCCGGTGACCGTTTTGTGATTACCGCCAACGGGCAGACTGTATTCAGCGAAAGCCGCACCACGTTGCGTGTCTGGTGGGCAGAAACTACCTGGCAGATGCAGCGCCTGCGTGACAACCCGGAGTGTGCCGATCAGGAGCATCAGGCGAAATCTAACGACGCCGATCCGGGCCTGAATGTAAAACTGTCGTTCGATATCAACGAAGATGTGGCAGCACCGTATATTGCCACTGGCGCACGTCCGAAAGTTGCCGTACTGCGTGAGCAGGGCGTGAACTCGCATGTTGAAATGGCGGCAGCTTTCCACCGTGCAGGCTTTGATGCTATCGACGTGCATATGAGTGACCTGCTGACCGGACGCACGGGCCTGGAAGATTTCCACGCCCTGGTCGCGTGCGGTGGTTTCTCCTACGGTGATGTGCTGGGTGCCGGTGAAGGTTGGGCGAAGTCAATCCTGTTCAATGACCGTGTACGCGATGAGTTTGCAACCTTCTTCCACCGTCCGCAAACGCTGGCGCTGGGGGTATGTAACGGTTGCCAGATGATGTCTAATCTGCGTGAACTGATCCCAGGTAGTGAGTTGTGGCCACGTTTTGTGCGCAATACCTCCGATCGCTTTGAAGCGCGTTTCAGCCTGGTTGAAGTAACCCAAAGCCCGTCTCTGCTGTTGCAGGGGATGGTGGGCTCGCAAATGCCGATTGCTGTCTCTCATGGTGAAGGGCGCGTGGAAGTGCGTGATGCGGCGCATCTGGCGGCACTGGAAAGCAAAGGGCTGGTGGCACTGCGCTATGTCGATAACTTCGGCAAAGTCACTGAAACCTACCCGGCTAACCCGAACGGTTCACCGAACGGTATTACGGCAGTCACGACTGAAAGTGGTCGAGTCACCATTATGATGCCGCACCCGGAACGTGTTTTCCGTACTGTCAGCAACTCCTGGCATCCGGAAAACTGGGGCGAGGATGGCCCATGGATGCGCATTTTCCGCAATGCGCGTAAGCAGTTGGGGTAA", - "dna_sequence_length": 3888, - "functions": [ - "phosphoribosylformyl-glycineamide synthetase" - ], - "id": "CDS_2540", - "location": [ - [ - "NC_000913", - 2695543, - "-", - 3888 - ] - ], - "md5": "10591b577f7a6e9cce87c2470992f9a1", - "parent_gene": "", - "protein_md5": "2b8b93cd99347ca7ff02031505a26bbe", - "protein_translation": "MMEILRGSPALSAFRINKLLARFQAARLPVHNIYAEYVHFADLNAPLNDDEHAQLERLLKYGPALASHAPQGKLLLVTPRPGTISPWSSKATDIAHNCGLQQVNRLERGVAYYIEAGTLTNEQWQQVTAELHDRMMETVFFALDDAEQLFAHHQPTPVTSVDLLGQGRQALIDANLRLGLALAEDEIDYLQDAFTKLGRNPNDIELYMFAQANSEHCRHKIFNADWVIDGEQQPKSLFKMIKNTFETTPDHVLSAYKDNAAVMEGSEVGRYFADHETGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALNGYFRTYEEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEINVGAKLVVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELREILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDELCKRERAPYAVIGEATEELHLSLHDRHFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGDALAREGITIADAVKRVLHLPTVAEKTFLVTIGDRSVTGMVARDQMVGPWQVPVANCAVTTASLDSYYGEAMAIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANWMAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSMKTRWQEGNEEREMTSPLSLVISAFARVEDVRHTITPQLSTEDNALLLIDLGKGNNALGATALAQVYRQLGDKPADVRDVAQLKGFYDAIQALVAQRKLLAYHDRSDGGLLVTLAEMAFAGHCGIDADIATLGDDRLAALFNEELGAVIQVRAADREAVESVLAQHGLADCVHYVGQAVSGDRFVITANGQTVFSESRTTLRVWWAETTWQMQRLRDNPECADQEHQAKSNDADPGLNVKLSFDINEDVAAPYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLTGRTGLEDFHALVACGGFSYGDVLGAGEGWAKSILFNDRVRDEFATFFHRPQTLALGVCNGCQMMSNLRELIPGSELWPRFVRNTSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVRDAAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTESGRVTIMMPHPERVFRTVSNSWHPENWGEDGPWMRIFRNARKQLG", - "protein_translation_length": 1295, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11373" - ], - [ - "gene_synonym", - "GI:171701683" - ], - [ - "gene_synonym", - "yfhD" - ], - [ - "gene_synonym", - "JW2542" - ], - [ - "gene_synonym", - "GeneID:947028" - ], - [ - "gene_synonym", - "NP_417053.2" - ], - [ - "gene_synonym", - "ECK2556" - ], - [ - "gene_synonym", - "b2558" - ], - [ - "gene_synonym", - "ASAP:ABE-0008417" - ], - [ - "gene_synonym", - "mltF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGC5" - ] - ], - "dna_sequence": "TTGAAAAAATTAAAGATTAATTATCTGTTCATCGGCATTCTGGCACTGCTGCTCGCGGTCGCTCTCTGGCCATCCATTCCCTGGTTTGGTAAAGCCGACAACCGTATCGCCGCCATTCAAGCGCGGGGAGAGTTGCGTGTGAGCACCATTCATACTCCCCTGACTTATAACGAAATCAACGGGAAACCTTTTGGCCTGGATTACGAACTGGCGAAACAGTTTGCCGATTACCTCGGCGTAAAACTGAAAGTGACCGTGCGGCAGAATATCAGCCAGCTGTTTGACGACCTTGATAATGGTAACGCCGACCTGCTGGCGGCAGGACTTGTCTATAACAGTGAGCGGGTAAAAAATTATCAGCCTGGCCCTACCTATTATTCCGTGTCACAACAACTGGTTTATAAAGTGGGTCAGTATCGCCCACGTACGCTGGGCAACCTGACGGCGGAGCAACTCACCGTTGCACCGGGTCATGTGGTGGTTAACGATCTCCAGACCCTGAAAGAAACAAAATTCCCGGAATTAAGCTGGAAGGTAGACGACAAAAAAGGCTCTGCGGAATTAATGGAAGATGTCATCGAAGGAAAACTCGATTACACCATTGCTGATTCTGTCGCCATCAGCCTGTTTCAGCGCGTTCACCCGGAGCTCGCCGTAGCGCTCGATATCACCGATGAACAACCGGTGACTTGGTTTAGCCCGTTAGATGGCGATAATACCCTTTCCGCCGCCCTGCTCGACTTCTTCAACGAAATGAATGAAGACGGTACGCTGGCACGCATTGAAGAGAAATACCTGGGGCATGGCGATGATTTTGATTACGTCGATACGCGCACATTTTTACGCGCCGTCGATGCGGTACTGCCGCAGTTAAAGCCCCTGTTTGAGAAATACGCCGAAGAAATTGACTGGCGTTTGCTGGCCGCTATTGCTTATCAGGAATCGCACTGGGATGCACAGGCCACTTCACCGACGGGTGTGCGCGGCATGATGATGTTAACCAAAAATACCGCGCAAAGCCTCGGCATTACGGATCGTACCGATGCCGAACAGAGCATCAGCGGTGGCGTGCGTTATTTGCAGGATATGATGAGTAAAGTGCCGGAAAGTGTGCCGGAGAACGAGCGGATCTGGTTTGCCCTCGCTGCGTACAATATGGGCTATGCGCATATGCTGGATGCCCGCGCCCTGACGGCAAAAACCAAAGGGAATCCTGACAGTTGGGCTGACGTAAAACAGCGTCTGCCTTTACTTAGCCAGAAACCCTATTACAGCAAGCTGACTTACGGCTACGCTCGTGGACATGAAGCCTACGCTTATGTCGAAAATATTCGTAAGTATCAGATTAGCCTGGTGGGTTATCTGCAAGAGAAAGAGAAGCAGGCTACAGAAGCGGCGATGCAACTGGCGCAGGATTATCCGGCGGTATCGCCTACGGAGTTGGGCAAAGAGAAATTTCCTTTTCTCTCGTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAA", 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"gene_synonym", - "EcoGene:EG11372" - ], - [ - "gene_synonym", - "yfhC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68398" - ], - [ - "gene_synonym", - "JW2543" - ], - [ - "gene_synonym", - "ASAP:ABE-0008419" - ], - [ - "gene_synonym", - "b2559" - ], - [ - "gene_synonym", - "ECK2557" - ], - [ - "gene_synonym", - "GI:145698301" - ], - [ - "gene_synonym", - "tadA" - ], - [ - "gene_synonym", - "NP_417054.2" - ] - ], - "dna_sequence": "TTGTCTGAAGTCGAATTTAGCCACGAATACTGGATGCGTCACGCGCTGACGCTGGCGAAACGTGCCTGGGATGAGCGGGAAGTGCCGGTCGGCGCGGTATTAGTGCATAACAATCGGGTAATCGGCGAAGGCTGGAACCGCCCGATTGGTCGCCATGATCCCACCGCACATGCAGAAATCATGGCCCTGCGGCAGGGTGGTCTGGTGATGCAAAATTATCGTCTGATCGACGCCACGTTGTATGTCACGCTTGAACCATGTGTAATGTGTGCCGGAGCGATGATCCACAGTCGCATTGGTCGCGTGGTCTTTGGTGCGCGTGACGCGAAAACTGGCGCTGCGGGATCTTTAATGGATGTGCTGCATCATCCGGGTATGAATCACCGAGTGGAAATTACGGAAGGAATACTGGCGGATGAGTGCGCGGCGTTGCTCAGTGACTTCTTTCGCATGCGCCGCCAGGAAATTAAAGCGCAGAAAAAAGCGCAATCCTCGACGGATTAA", - "dna_sequence_length": 504, - "functions": [ - "tRNA-specific adenosine deaminase" - ], - "id": "CDS_2542", - "location": [ - [ - "NC_000913", - 2697857, - "-", - 504 - ] - ], - "md5": "782338ca990e23df6c3445fb37a39989", - "parent_gene": "", - "protein_md5": "bfbf4b8e66e6d230b32679dffad7d9f0", - "protein_translation": "MSEVEFSHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFFRMRRQEIKAQKKAQSSTD", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5408" - ], - [ - "gene_synonym", - "EcoGene:EG11371" - ], - [ - "gene_synonym", - "GeneID:947026" - ], - [ - "gene_synonym", - "yfhB" - ], - [ - "gene_synonym", - "GI:90111459" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD42" - ], - [ - "gene_synonym", - "ECK2558" - ], - [ - "gene_synonym", - "b2560" - ], - [ - "gene_synonym", - "pgpC" - ], - [ - "gene_synonym", - "NP_417055.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0008421" - ] - ], - "dna_sequence": "TTGGCAACTCACGAGCGTCGTGTGGTGTTTTTTGACTTAGATGGAACATTGCATCAGCAGGATATGTTCGGCAGTTTTCTGCGCTATTTACTACGTCGCCAACCGCTGAATGCGTTACTTGTCCTGCCGTTGTTACCGATTATAGCCATTGCGTTATTGATAAAAGGTCGTGCGGCACGCTGGCCGATGAGTCTGCTTCTGTGGGGGTGCACTTTTGGTCACAGCGAAGCACGTTTACAGACGTTGCAGGCCGATTTCGTGCGCTGGTTTCGCGACAATGTTACCGCCTTTCCGCTGGTTCAGGAGCGATTAACCACCTACCTGTTAAGTTCCGATGCTGATATCTGGTTGATTACCGGCTCTCCGCAGCCGCTGGTTGAAGCGGTTTATTTCGATACGCCCTGGCTGCCGCGGGTTAATCTTATCGCCAGCCAAATTCAGCGTGGCTATGGTGGTTGGGTATTGACGATGCGTTGTCTGGGACATGAAAAGGTCGCACAACTGGAGCGCAAAATCGGCACTCCGCTGCGGCTGTACAGTGGCTATAGCGACAGTAATCAGGACAATCCGCTGCTTTATTTCTGTCAGCATCGTTGGCGAGTAACCCCGCGCGGTGAACTCCAGCAACTGGAATAG", - "dna_sequence_length": 636, - "functions": [ - "phosphatidylglycerophosphatase C, membrane bound" - ], - "id": "CDS_2543", - "location": [ - [ - "NC_000913", - 2698550, - "-", - 636 - ] - ], - "md5": "7de7a90815532a73d5592c610dcda485", - "parent_gene": "", - "protein_md5": "7d7e164cf8683d8f074f29c7e87f2f08", - "protein_translation": "MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPLLPIIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQERLTTYLLSSDADIWLITGSPQPLVEAVYFDTPWLPRVNLIASQIQRGYGGWVLTMRCLGHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE", - "protein_translation_length": 211, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947030" - ], - [ - "gene_synonym", - "yfhH" - ], - [ - "gene_synonym", - "JW2545" - ], - [ - "gene_synonym", - "NP_417056.2" - ], - [ - "gene_synonym", - "EcoGene:EG12308" - ], - [ - "gene_synonym", - "b2561" - ], - [ - "gene_synonym", - "ASAP:ABE-0008428" - ], - [ - "gene_synonym", - "ECK2559" - ], - [ - "gene_synonym", - "GI:90111460" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37767" - ] - ], - "dna_sequence": "ATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCTGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCGGCTATAAAGGTTTTCCGGCGCTTAAGTTGGCGTTGAGTGAAGCGCTGGCAAGCCAGCCGGAATCACCCTCCGTGCCCATTCATAACCAAATCCGCGGTGATGATCCGTTACGGCTGGTCGGCGAAAAACTGATTAAAGAAAATACTGCCGCTATGTACGCAACGCTAAACGTTAATAGTGAAGAGAAACTGCATGAATGCGTAACAATGTTGCGCTCTGCGCGGCGGATAATTCTGACCGGTATTGGCGCTTCGGGTCTGGTGGCGCAAAACTTTGCCTGGAAGCTGATGAAGATTGGCTTCAATGCTGCCGCAGTGCGCGATATGCATGCGCTACTCGCAACAGTACAGGCGTCGTCCCCTGACGATCTGTTATTAGCCATTTCCTACACCGGTGTACGACGCGAGTTAAACCTGGCGGCAGATGAGATGCTGCGAGTGGGCGGAAAAGTGCTGGCGATTACCGGCTTTACTCCGAATGCCCTGCAACAGCGTGCTTCTCATTGCCTGTATACCATTGCCGAAGAACAAGCGACAAACAGTGCTTCAATCTCTGCTTGTCACGCTCAGGGAATGTTAACGGATTTGCTGTTCATTGCGCTGATTCAGCAGGATCTGGAACTGGCACCAGAACGTATTCGTCATAGTGAAGCGCTGGTGAAAAAACTGGTCTGA", - "dna_sequence_length": 849, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_2544", - "location": [ - [ - "NC_000913", - 2698759, - "+", - 849 - ] - ], - "md5": "bec5acdac05ab2f34faa9f4bfd10141c", - "parent_gene": "", - "protein_md5": "27f16372a240005d2e2e205f11d1073e", - "protein_translation": "MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEALVKKLV", - "protein_translation_length": 282, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008431" - ], - [ - "gene_synonym", - "GeneID:947031" - ], - [ - "gene_synonym", - "EcoGene:EG13215" - ], - [ - "gene_synonym", - "yfhL" - ], - [ - "gene_synonym", - "NP_417057.1" - ], - [ - "gene_synonym", - "JW2546" - ], - [ - "gene_synonym", - "b2562" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52102" - ], - [ - "gene_synonym", - "ECK2560" - ], - [ - "gene_synonym", - "GI:16130487" - ] - ], - "dna_sequence": "ATGGCGTTGTTAATCACTAAAAAATGCATCAATTGTGATATGTGTGAACCCGAATGCCCGAATGAGGCGATTTCAATGGGAGATCATATCTACGAGATTAACAGCGATAAGTGTACCGAATGCGTAGGGCACTACGAGACACCAACCTGCCAGAAGGTGTGCCCGATCCCCAATACTATTGTGAAAGATCCGGCGCATGTCGAGACAGAAGAACAGTTGTGGGATAAATTTGTGCTGATGCACCACGCGGATAAAATTTAA", - "dna_sequence_length": 261, - "functions": [ - "putative 4Fe-4S cluster-containing protein" - ], - "id": "CDS_2545", - "location": [ - [ - "NC_000913", - 2699663, - "+", - 261 - ] - ], - "md5": "29050e41d950a214efa7447e35108d02", - "parent_gene": "", - "protein_md5": "aafd6e66713fcf0b109289f673d6f7c6", - "protein_translation": "MALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGHYETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMHHADKI", - "protein_translation_length": 86, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:7751620" - ], - [ - "gene_synonym", - "GI:226524739" - ], - [ - "gene_synonym", - "yphI" - ], - [ - "gene_synonym", - "ryfB" - ], - [ - "gene_synonym", - "ECK4502" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P611" - ], - [ - "gene_synonym", - "EcoGene:EG14494" - ], - [ - "gene_synonym", - "shoB" - ], - [ - "gene_synonym", - "YP_002791251.1" - ], - [ - "gene_synonym", - "b4687" - ] - ], - "dna_sequence": "ATGACTGATTGCCGATACCTGATTAAACGGGTCATCAAAATCATCATTGCTGTTTTACAGCTGATCCTTCTGTTCTTATAA", - "dna_sequence_length": 81, - "functions": [ - "toxic membrane protein" - ], - "id": "CDS_2546", - "location": [ - [ - "NC_000913", - 2700197, - "-", - 81 - ] - ], - "md5": "7a6269136f4fb98a1f90490e96ee6b17", - "parent_gene": "", - "protein_md5": "61b0760be71ed84b9c687ca972c6f4ec", - "protein_translation": "MTDCRYLIKRVIKIIIAVLQLILLFL", - "protein_translation_length": 26, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008433" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24224" - ], - [ - "gene_synonym", - "acpS" - ], - [ - "gene_synonym", - "JW2547" - ], - [ - "gene_synonym", - "GI:16130488" - ], - [ - "gene_synonym", - "b2563" - ], - [ - "gene_synonym", - "GeneID:947037" - ], - [ - "gene_synonym", - "EcoGene:EG10247" - ], - [ - "gene_synonym", - "NP_417058.1" - ], - [ - "gene_synonym", - "ECK2561" - ], - [ - "gene_synonym", - "dpj" - ] - ], - "dna_sequence": "ATGGCAATATTAGGTTTAGGCACGGATATTGTGGAGATCGCTCGCATCGAAGCGGTGATCGCCCGATCCGGTGATCGCCTGGCACGCCGCGTATTAAGCGATAACGAATGGGCTATCTGGAAAACGCACCACCAGCCGGTGCGTTTTCTGGCGAAGCGTTTTGCTGTGAAAGAAGCCGCAGCAAAAGCGTTTGGCACCGGGATCCGCAATGGTCTGGCGTTTAATCAATTTGAAGTATTCAATGATGAGCTCGGCAAACCACGGCTACGGCTATGGGGCGAGGCATTAAAACTGGCGGAAAAGCTGGGCGTTGCAAATATGCATGTAACGCTGGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAA", - "dna_sequence_length": 381, - "functions": [ - "holo-[acyl-carrier-protein] synthase 1" - ], - "id": "CDS_2547", - "location": [ - [ - "NC_000913", - 2700998, - "-", - 381 - ] - ], - "md5": "f986c61ba3ce32b46adf267515e18cd4", - "parent_gene": "", - "protein_md5": "5d741571fc120864525d08b94a73b46b", - "protein_translation": "MAILGLGTDIVEIARIEAVIARSGDRLARRVLSDNEWAIWKTHHQPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKLGVANMHVTLADERHYACATVIIES", - "protein_translation_length": 126, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "pdxJ" - ], - [ - "gene_synonym", - "JW2548" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A794" - ], - [ - "gene_synonym", - "NP_417059.1" - ], - [ - "gene_synonym", - "GeneID:947039" - ], - [ - "gene_synonym", - "EcoGene:EG10693" - ], - [ - "gene_synonym", - "GI:16130489" - ], - [ - "gene_synonym", - "b2564" - ], - [ - "gene_synonym", - "ASAP:ABE-0008435" - ], - [ - "gene_synonym", - "ECK2562" - ] - ], - "dna_sequence": "ATGGCTGAATTACTGTTAGGCGTCAACATTGACCATATCGCTACGCTGCGCAACGCGCGCGGTACCGCTTACCCGGATCCGGTGCAGGCCGCGTTTATTGCCGAGCAGGCGGGAGCGGACGGCATTACCGTGCATTTACGTGAAGATCGCCGTCACATTACTGACCGCGACGTGCGCATCCTGCGTCAGACGCTGGATACCCGCATGAATCTGGAGATGGCGGTGACCGAAGAGATGCTGGCGATCGCCGTTGAGACGAAGCCACATTTTTGCTGCCTGGTACCGGAAAAGCGTCAGGAAGTAACAACCGAAGGCGGCCTGGATGTCGCAGGGCAGCGTGACAAAATGCGCGATGCCTGCAAACGTCTGGCAGATGCCGGGATTCAGGTTTCTCTGTTTATTGACGCCGATGAAGAGCAGATCAAAGCTGCGGCAGAGGTTGGCGCACCGTTTATCGAGATCCACACCGGTTGCTATGCTGATGCCAAAACTGACGCCGAACAGGCGCAAGAGCTGGCGCGTATCGCCAAAGCCGCGACCTTTGCCGCAAGCCTCGGTCTGAAAGTTAACGCCGGACACGGTCTGACCTATCACAACGTGAAAGCCATTGCCGCCATCCCTGAGATGCATGAACTGAATATCGGTCATGCCATTATTGGTCGTGCAGTGATGACCGGACTGAAAGATGCGGTGGCAGAAATGAAGCGTCTGATGCTGGAAGCGCGTGGCTAA", - "dna_sequence_length": 732, - "functions": [ - "pyridoxine 5'-phosphate synthase" - ], - "id": "CDS_2548", - "location": [ - [ - "NC_000913", - 2701729, - "-", - 732 - ] - ], - "md5": "ae4bf996ba5b5823477c4934e9ec9ed8", - "parent_gene": "", - "protein_md5": "09824aca3ccb5f945b217d95f424c697", - "protein_translation": "MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAIIGRAVMTGLKDAVAEMKRLMLEARG", - "protein_translation_length": 243, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2549" - ], - [ - "gene_synonym", - "GeneID:947038" - ], - [ - "gene_synonym", - "ASAP:ABE-0008438" - ], - [ - "gene_synonym", - "EcoGene:EG10832" - ], - [ - "gene_synonym", - "NP_417060.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7H3" - ], - [ - "gene_synonym", - "b2565" - ], - [ - "gene_synonym", - "GI:16130490" - ], - [ - "gene_synonym", - "ECK2563" - ], - [ - "gene_synonym", - "recO" - ] - ], - "dna_sequence": "ATGGAAGGCTGGCAGCGCGCATTTGTCCTGCATAGTCGCCCGTGGAGCGAAACCAGCCTGATGCTGGACGTCTTCACGGAGGAATCGGGGCGCGTGCGTCTGGTTGCCAAAGGCGCACGCTCTAAACGCTCTACCCTGAAAGGTGCATTACAGCCTTTCACCCCTCTCTTGCTACGTTTTGGCGGGCGTGGCGAAGTCAAAACGCTGCGCAGTGCTGAAGCCGTCTCGCTGGCGCTGCCATTAAGCGGTATCACGCTTTACAGCGGTCTGTACATCAACGAACTTCTCTCCCGCGTACTGGAATACGAGACGCGCTTCTCTGAACTTTTTTTCGATTACTTGCACTGCATTCAGTCTCTTGCAGGGGTCACTGGTACGCCAGAACCCGCGCTGCGCCGCTTTGAACTGGCACTGCTCGGGCATCTGGGTTATGGCGTCAATTTTACCCATTGTGCGGGTAGCGGCGAGCCGGTAGATGACACCATGACGTATCGTTATCGCGAAGAAAAAGGGTTTATCGCAAGCGTCGTTATCGACAATAAAACGTTCACCGGAAGGCAGTTAAAAGCGTTAAACGCACGGGAATTTCCTGACGCAGACACACTGCGCGCCGCGAAACGCTTTACCCGCATGGCGCTTAAGCCGTATCTTGGCGGTAAACCTTTAAAGAGCAGGGAACTGTTCCGGCAGTTTATGCCTAAGCGAACGGTGAAAACACATTATGAATGA", - "dna_sequence_length": 729, - "functions": [ - "gap repair protein" - ], - "id": "CDS_2549", - "location": [ - [ - "NC_000913", - 2702469, - "-", - 729 - ] - ], - "md5": "664a2a5f9353c0d36eb03eb5ac489c0d", - "parent_gene": "", - "protein_md5": "42389b66c69d4b6314aab19100d429a3", - "protein_translation": "MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDDTMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTHYE", - "protein_translation_length": 242, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06616" - ], - [ - "gene_synonym", - "ASAP:ABE-0008440" - ], - [ - "gene_synonym", - "GeneID:947036" - ], - [ - "gene_synonym", - "JW2550" - ], - [ - "gene_synonym", - "sdgE" - ], - [ - "gene_synonym", - "b2566" - ], - [ - "gene_synonym", - "era" - ], - [ - "gene_synonym", - "NP_417061.1" - ], - [ - "gene_synonym", - "ECK2564" - ], - [ - "gene_synonym", - "GI:16130491" - ], - [ - "gene_synonym", - "EcoGene:EG10270" - ] - ], - "dna_sequence": "ATGAGCATCGATAAAAGTTACTGCGGATTTATTGCCATCGTCGGACGTCCGAACGTTGGCAAATCCACATTGTTGAACAAACTGCTGGGGCAGAAAATCTCCATCACTTCCCGCAAGGCGCAGACAACTCGTCACCGCATTGTGGGGATCCATACTGAAGGCGCGTATCAGGCGATCTACGTCGATACACCGGGCCTGCATATGGAAGAAAAACGCGCCATTAACCGCCTGATGAACAAAGCGGCGAGCAGCTCTATTGGCGATGTTGAGCTGGTGATTTTTGTCGTTGAAGGCACCCGCTGGACGCCGGACGACGAAATGGTGCTCAACAAACTGCGCGAAGGCAAAGCGCCGGTAATCCTCGCGGTGAACAAAGTGGACAACGTGCAGGAGAAAGCCGATCTGCTGCCGCACCTGCAGTTCCTGGCAAGCCAGATGAACTTCCTCGATATCGTGCCAATCTCTGCCGAAACCGGGCTGAATGTTGACACTATTGCGGCAATCGTGCGTAAGCATCTACCTGAAGCGACTCATCACTTCCCGGAAGATTACATCACCGATCGCTCACAGCGTTTTATGGCGTCTGAAATCATCCGCGAAAAACTGATGCGTTTCCTCGGCGCTGAACTGCCGTACTCCGTGACCGTGGAGATCGAACGTTTCGTCTCTAACGAACGCGGTGGTTATGACATCAACGGTTTGATTCTCGTTGAGCGTGAAGGGCAGAAGAAGATGGTCATTGGCAACAAAGGGGCCAAGATCAAAACCATCGGGATTGAAGCGCGTAAAGACATGCAGGAAATGTTCGAAGCGCCTGTTCACCTTGAACTGTGGGTAAAAGTGAAATCCGGTTGGGCCGACGACGAACGCGCACTGCGCAGTCTCGGTTACGTTGACGATCTTTAA", - "dna_sequence_length": 906, - "functions": [ - "membrane-associated, 16S rRNA-binding GTPase" - ], - "id": "CDS_2550", - "location": [ - [ - "NC_000913", - 2703386, - "-", - 906 - ] - ], - "md5": "323db03fdc18eb7d1282a863761b91a2", - "parent_gene": "", - "protein_md5": "adcd2c234c40a28b9de3dc5ebd7053b3", - "protein_translation": "MSIDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLGYVDDL", - "protein_translation_length": 301, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417062.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7Y0" - ], - [ - "gene_synonym", - "GeneID:947033" - ], - [ - "gene_synonym", - "ranA" - ], - [ - "gene_synonym", - "rnc" - ], - [ - "gene_synonym", - "JW2551" - ], - [ - "gene_synonym", - "ASAP:ABE-0008448" - ], - [ - "gene_synonym", - "EcoGene:EG10857" - ], - [ - "gene_synonym", 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"895cbfeb26cab550aa3029e6ff7bde28", - "parent_gene": "", - "protein_md5": "b81a8841be34ad90cf46589e02b5db5e", - "protein_translation": "MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE", - "protein_translation_length": 226, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417063.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00803" - ], - [ - "gene_synonym", - "ASAP:ABE-0008450" - ], - [ - "gene_synonym", - "EcoGene:EG10530" - ], - [ - "gene_synonym", - "JW2552" - ], - [ - "gene_synonym", - "lep" - ], - [ - "gene_synonym", - "GeneID:947040" - ], - [ - "gene_synonym", - "GI:16130493" - ], - [ - "gene_synonym", - "b2568" - ], - [ - "gene_synonym", - "ECK2566" - ], - [ - "gene_synonym", - "lepB" - ] - ], - "dna_sequence": "ATGGCGAATATGTTTGCCCTGATTCTGGTGATTGCCACACTGGTGACGGGCATTTTATGGTGCGTGGATAAATTCTTTTTCGCACCTAAACGGCGGGAACGTCAGGCAGCGGCGCAGGCGGCTGCCGGGGACTCACTGGATAAAGCAACGTTGAAAAAGGTTGCGCCGAAGCCTGGCTGGCTGGAAACCGGTGCTTCTGTTTTTCCGGTACTGGCTATCGTATTGATTGTGCGTTCGTTTATTTATGAACCGTTCCAGATCCCGTCAGGTTCGATGATGCCGACTCTGTTAATTGGTGATTTTATTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACATCAAGCGCGCGGTGGGTTTACCGGGCGATAAAGTCACTTACGATCCGGTCTCAAAAGAGCTGACGATTCAACCGGGATGCAGTTCCGGCCAGGCGTGTGAAAACGCGCTGCCGGTCACCTACTCAAACGTGGAACCGAGCGATTTCGTTCAGACCTTCTCACGCCGTAATGGTGGGGAAGCGACCAGCGGATTCTTTGAAGTGCCGAAAAACGAAACCAAAGAAAATGGAATTCGTCTTTCCGAGCGTAAAGAGACACTGGGTGATGTGACGCACCGCATTCTGACAGTGCCGATTGCGCAGGATCAGGTGGGGATGTATTACCAGCAGCCAGGGCAACAACTGGCAACCTGGATTGTTCCTCCGGGACAATACTTCATGATGGGCGACAACCGCGACAACAGCGCGGACAGCCGTTACTGGGGCTTTGTGCCGGAAGCGAATCTGGTCGGTCGGGCAACGGCTATCTGGATGAGCTTCGATAAGCAAGAAGGCGAATGGCCGACTGGTCTGCGCTTAAGTCGCATTGGCGGCATCCATTAA", - "dna_sequence_length": 975, - "functions": [ - "leader peptidase (signal peptidase I)" - ], - "id": "CDS_2552", - "location": [ - [ - "NC_000913", - 2705309, - "-", - 975 - ] - ], - "md5": "9a32b42f7eef40045c5bea91a3df9438", - "parent_gene": "", - "protein_md5": "90522cfe810e9d803f7139007dd292c4", - "protein_translation": "MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGDSLDKATLKKVAPKPGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGLRLSRIGGIH", - "protein_translation_length": 324, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10529" - ], - [ - "gene_synonym", - "ASAP:ABE-0008452" - ], - [ - "gene_synonym", - "JW2553" - ], - [ - "gene_synonym", - "GeneID:947051" - ], - [ - "gene_synonym", - "NP_417064.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60785" - ], - [ - "gene_synonym", - "ECK2567" - ], - [ - "gene_synonym", - "b2569" - ], - [ - "gene_synonym", - "lepA" - ], - [ - "gene_synonym", - "GI:16130494" - ] - ], - "dna_sequence": "ATGAAGAATATACGTAACTTTTCGATCATAGCTCACATTGACCACGGTAAATCGACGCTGTCTGACCGTATTATCCAGATCTGCGGTGGCCTGTCTGACCGTGAAATGGAGGCGCAGGTTCTCGATTCCATGGATCTTGAGCGTGAGCGTGGCATTACCATCAAAGCGCAAAGCGTGACGCTGGACTACAAAGCGTCTGACGGCGAAACCTATCAGCTTAACTTTATCGACACCCCGGGCCACGTAGACTTCTCCTATGAAGTTTCCCGTTCGCTGGCTGCCTGTGAAGGTGCATTGCTGGTGGTCGACGCCGGGCAGGGCGTAGAAGCGCAAACCCTGGCAAACTGCTACACCGCCATGGAAATGGATCTCGAAGTTGTGCCGGTACTGAACAAGATTGACCTGCCGGCAGCCGATCCTGAACGCGTGGCGGAAGAAATTGAAGATATCGTCGGCATCGACGCCACCGACGCGGTGCGCTGTTCAGCGAAAACCGGCGTTGGTGTGCAGGACGTTCTCGAACGTCTGGTGCGCGACATTCCGCCGCCGGAAGGCGATCCGGAAGGCCCGTTGCAGGCACTAATTATCGACTCATGGTTCGACAACTACCTGGGCGTTGTTTCACTTATCCGTATTAAAAACGGCACCCTGCGTAAGGGCGACAAAGTGAAAGTCATGAGTACCGGGCAGACCTATAACGCCGACCGTCTGGGCATCTTCACGCCGAAACAGGTTGACCGCACTGAACTGAAATGTGGCGAAGTAGGCTGGCTCGTATGTGCGATTAAAGATATCCACGGCGCTCCAGTCGGCGATACCTTAACGCTGGCGCGTAATCCGGCAGAAAAGGCGCTGCCTGGCTTTAAGAAAGTCAAACCGCAGGTATACGCCGGTCTGTTCCCGGTAAGTTCCGACGACTATGAAGCCTTCCGTGACGCGCTGGGTAAACTCAGCCTGAACGATGCCTCACTGTTCTATGAGCCGGAAAGCTCCAGCGCGCTGGGCTTTGGTTTCCGCTGCGGCTTCCTCGGCCTGCTGCACATGGAGATCATCCAGGAACGTCTGGAACGTGAATACGATCTGGATCTGATCACCACTGCGCCGACCGTAGTGTATGAAGTTGAAACCACGTCAAGAGAAGTTATCTACGTCGACAGCCCATCCAAGCTGCCTGCGGTAAATAACATCTACGAACTGCGCGAGCCGATTGCAGAGTGTCACATGCTGCTGCCGCAGGCATATCTCGGCAACGTTATTACGTTGTGCGTAGAAAAACGCGGCGTGCAGACCAATATGGTTTACCACGGTAATCAGGTGGCGCTGACGTACGAGATCCCGATGGCGGAAGTGGTGCTCGACTTCTTCGATCGCCTGAAATCTACCTCGCGTGGTTATGCGTCTCTGGATTACAACTTCAAGCGCTTCCAGGCGTCCGACATGGTACGTGTAGACGTATTAATCAACGGTGAACGTGTTGATGCGCTGGCGTTGATCACCCACCGTGATAATTCGCAAAACCGCGGTCGCGAGTTGGTGGAGAAGATGAAAGATCTGATCCCACGCCAGCAGTTTGATATCGCCATTCAGGCAGCGATTGGTACGCACATCATTGCGCGATCCACCGTGAAACAGCTGCGTAAAAACGTACTGGCTAAATGTTATGGCGGCGATATCAGCCGTAAGAAAAAGCTGCTGCAGAAGCAGAAAGAAGGTAAGAAACGCATGAAGCAGATCGGTAACGTCGAGCTGCCGCAGGAAGCGTTCCTCGCCATTCTGCACGTCGGCAAAGACAACAAATAA", 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- { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008457" - ], - [ - "gene_synonym", - "EcoGene:EG13178" - ], - [ - "gene_synonym", - "NP_417065.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46187" - ], - [ - "gene_synonym", - "JW2554" - ], - [ - "gene_synonym", - "b2570" - ], - [ - "gene_synonym", - "GeneID:947052" - ], - [ - "gene_synonym", - "ECK2568" - ], - [ - "gene_synonym", - "rseC" - ], - [ - "gene_synonym", - "GI:16130495" - ] - ], - "dna_sequence": "ATGATCAAAGAGTGGGCTACCGTCGTCTCCTGGCAAAACGGGCAGGCGCTGGTCAGTTGTGATGTTAAAGCTTCATGCAGCAGCTGCGCTTCACGCGCCGGTTGCGGTAGCCGCGTGTTAAATAAACTTGGCCCGCAAACCACGCATACCATTGTCGTACCCTGTGATGAGCCGTTAGTGCCGGGGCAAAAAGTGGAATTGGGGATCGCCGAAGGCAGCCTGCTTAGCTCCGCATTACTGGTTTATATGTCGCCGCTGGTGGGATTATTCCTTATCGCTTCGCTATTTCAGCTACTCTTTGCTTCTGACGTCGCAGCATTATGTGGTGCGATCCTCGGTGGTATTGGCGGGTTCCTGATTGCGCGCGGCTACTCGCGTAAGTTTGCTGCCCGGGCAGAATGGCAACCGATCATCTTAAGCGTGGCATTGCCGCCTGGCCTTGTGCGATTTGAAACATCTTCGGAAGACGCGAGCCAGTGA", - "dna_sequence_length": 480, - "functions": [ - "SoxR iron-sulfur cluster reduction factor component" - ], - "id": "CDS_2554", - "location": [ - [ - "NC_000913", - 2707801, - "-", - 480 - ] - ], - "md5": "35faa66af19f1dadd00182f81d1b22af", - "parent_gene": "", - "protein_md5": "1c27f669ed8650035a7406302163535c", - "protein_translation": "MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLGPQTTHTIVVPCDEPLVPGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLFASDVAALCGAILGGIGGFLIARGYSRKFAARAEWQPIILSVALPPGLVRFETSSEDASQ", - "protein_translation_length": 159, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13177" - ], - [ - "gene_synonym", - "NP_417066.1" - ], - [ - "gene_synonym", - "JW2555" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFX9" - ], - [ - "gene_synonym", - "b2571" - ], - [ - "gene_synonym", - "GeneID:947054" - ], - [ - "gene_synonym", - "ECK2569" - ], - [ - "gene_synonym", - "ASAP:ABE-0008459" - ], - [ - "gene_synonym", - "rseB" - ], - [ - "gene_synonym", - "GI:16130496" - ] - ], - "dna_sequence": "ATGAAGCAACTTTGGTTTGCCATGTCATTAGTGACAGGTAGCCTGTTATTCTCTGCTAACGCCTCGGCCACTCCCGCGTCCGGGGCGTTATTACAGCAGATGAACCTGGCCAGTCAGTCACTGAATTACGAGCTGTCATTCATCAGCATCAATAAACAGGGTGTTGAGTCTCTGCGTTATCGACATGCACGCCTCGATAACCGTCCTCTTGCACAATTGTTGCAAATGGATGGCCCGCGCCGGGAAGTGGTACAGCGCGGCAATGAAATCAGCTATTTTGAACCGGGACTTGAACCGTTCACGCTTAATGGCGATTACATTGTTGATTCTCTGCCATCGCTTATCTATACCGATTTCAAACGCCTTTCTCCTTACTACGACTTTATCTCCGTCGGGCGCACGCGTATTGCTGATCGTCTTTGCGAAGTCATTCGCGTGGTTGCCCGAGATGGTACACGCTACAGCTACATCGTGTGGATGGACACCGAATCGAAATTACCGATGCGGGTTGATCTCCTTGATCGCGATGGTGAAACGCTGGAACAATTTCGCGTGATTGCTTTTAACGTCAATCAGGATATCAGCAGCAGTATGCAGACGCTGGCGAAGGCAAATTTGCCGCCGTTGCTTTCTGTTCCTGTAGGTGAAAAAGCTAAATTCAGCTGGACGCCAACCTGGTTGCCACAGGGTTTTAGCGAAGTTTCCAGTAGTCGACGTCCGCTACCGACGATGGACAACATGCCTATCGAATCACGTCTCTATTCCGACGGATTATTCAGCTTCTCGGTAAACGTTAACCGCGCTACGCCATCGAGCACCGATCAGATGTTGCGCACCGGACGCAGAACCGTCAGTACAAGCGTACGTGATAACGCCGAAATCACCATTGTCGGTGAACTGCCGCCGCAAACGGCGAAACGCATTGCCGAGAATATTAAGTTCGGGGCAGCGCAATGA", - "dna_sequence_length": 957, - "functions": [ - "anti-sigma E factor, binds RseA" - ], - "id": "CDS_2555", - "location": [ - [ - "NC_000913", - 2708754, - "-", - 957 - ] - ], - "md5": "0d828a4b8c01916c6d748b21cc133b94", - "parent_gene": "", - "protein_md5": "6a47864645205b02d31d4491088179b7", - "protein_translation": "MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYELSFISINKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGNEISYFEPGLEPFTLNGDYIVDSLPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDTESKLPMRVDLLDRDGETLEQFRVIAFNVNQDISSSMQTLAKANLPPLLSVPVGEKAKFSWTPTWLPQGFSEVSSSRRPLPTMDNMPIESRLYSDGLFSFSVNVNRATPSSTDQMLRTGRRTVSTSVRDNAEITIVGELPPQTAKRIAENIKFGAAQ", - "protein_translation_length": 318, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfiJ" - ], - [ - "gene_synonym", - "mclA" - ], - [ - "gene_synonym", - "ASAP:ABE-0008462" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFX7" - ], - [ - "gene_synonym", - "EcoGene:EG12341" - ], - [ - "gene_synonym", - "JW2556" - ], - [ - "gene_synonym", - "b2572" - ], - [ - "gene_synonym", - "GeneID:947053" - ], - [ - "gene_synonym", - "NP_417067.1" - ], - [ - "gene_synonym", - "ECK2570" - ], - [ - "gene_synonym", - "rseA" - ], - [ - "gene_synonym", - "GI:16130497" - ] - ], - "dna_sequence": "ATGCAGAAAGAACAACTTTCCGCTTTAATGGATGGCGAAACGCTGGATAGTGAGCTGCTTAACGAACTGGCTCATAACCCAGAAATGCAGAAAACCTGGGAAAGCTATCACTTAATCCGTGACTCAATGCGGGGTGATACTCCCGAGGTGCTCCATTTCGATATCTCTTCACGCGTGATGGCCGCCATTGAAGAAGAGCCAGTACGTCAACCGGCGACATTGATCCCGGAAGCCCAGCCTGCGCCGCATCAATGGCAGAAAATGCCATTCTGGCAGAAAGTACGTCCGTGGGCGGCACAGCTTACCCAAATGGGCGTAGCCGCATGCGTATCGCTTGCAGTTATCGTTGGCGTCCAGCACTATAATGGACAATCTGAAACGTCCCAGCAGCCCGAAACGCCGGTATTTAATACACTGCCGATGATGGGTAAAGCCAGCCCGGTAAGCCTGGGAGTACCTTCTGAAGCGACCGCAAACAATGGTCAACAGCAGCAGGTACAGGAGCAGCGTCGTCGCATTAATGCAATGTTGCAGGATTACGAACTGCAACGCCGACTCCACTCTGAACAGCTTCAGTTTGAGCAGGCGCAAACCCAGCAAGCCGCTGTACAGGTGCCAGGAATTCAAACTTTAGGAACGCAATCGCAGTAA", - "dna_sequence_length": 651, - "functions": [ - "anti-sigma factor" - ], - "id": "CDS_2556", - "location": [ - [ - "NC_000913", - 2709404, - "-", - 651 - ] - ], - "md5": "f8c71bf119421b724dd17dc42a9c5a54", - "parent_gene": "", - "protein_md5": "802a622f16887530be1ab825e4ad3e5c", - "protein_translation": "MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ", - "protein_translation_length": 216, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "sigE" - ], - [ - "gene_synonym", - "GeneID:947050" - ], - [ - "gene_synonym", - "NP_417068.1" - ], - [ - "gene_synonym", - "JW2557" - ], - [ - "gene_synonym", - "ASAP:ABE-0008467" - ], - [ - "gene_synonym", - "b2573" - ], - [ - "gene_synonym", - "GI:16130498" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGB6" - ], - [ - "gene_synonym", - "rpoE" - ], - [ - "gene_synonym", - "EcoGene:EG11897" - ], - [ - "gene_synonym", - "ECK2571" - ] - ], - "dna_sequence": "ATGAGCGAGCAGTTAACGGACCAGGTCCTGGTTGAACGGGTCCAGAAGGGAGATCAGAAAGCCTTTAACTTACTGGTAGTGCGCTATCAGCATAAAGTGGCGAGTCTGGTTTCCCGCTATGTGCCGTCGGGTGATGTTCCCGATGTGGTACAAGAAGCTTTTATTAAAGCCTATCGTGCGCTGGATTCGTTCCGGGGAGATAGCGCTTTTTATACATGGCTGTATCGGATTGCTGTAAATACAGCGAAAAATTACCTGGTTGCTCAGGGGCGTCGTCCACCTTCCAGTGATGTGGATGCCATTGAAGCTGAAAACTTCGAAAGTGGCGGCGCGTTGAAAGAAATTTCGAACCCTGAGAACTTAATGTTGTCAGAAGAACTGAGACAGATAGTTTTCCGAACTATTGAGTCCCTCCCGGAAGATTTACGCATGGCAATAACCTTGCGGGAGCTGGATGGCCTGAGCTATGAAGAGATAGCCGCTATCATGGATTGTCCGGTAGGTACGGTGCGTTCACGTATCTTCCGAGCGAGGGAAGCTATTGATAACAAAGTTCAACCGCTTATCAGGCGTTGA", - "dna_sequence_length": 576, - "functions": [ - "RNA polymerase sigma E factor" - ], - "id": "CDS_2557", - "location": [ - [ - "NC_000913", - 2710012, - "-", - 576 - ] - ], - "md5": "88f601b40f0424431a2c577270733a37", - "parent_gene": "", - "protein_md5": "cbc71f42bfa9d5ba628fd0f044c0b4df", - "protein_translation": "MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR", - "protein_translation_length": 191, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2558" - ], - [ - "gene_synonym", - "nadB" - ], - [ - "gene_synonym", - "ASAP:ABE-0008471" - ], - [ - "gene_synonym", - "NP_417069.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10902" - ], - [ - "gene_synonym", - "nicB" - ], - [ - "gene_synonym", - "GI:16130499" - ], - [ - "gene_synonym", - "b2574" - ], - [ - "gene_synonym", - "EcoGene:EG10631" - ], - [ - "gene_synonym", - "nic" - ], - [ - "gene_synonym", - "ECK2572" - ], - [ - "gene_synonym", - "GeneID:947049" - ] - ], - "dna_sequence": "ATGAATACTCTCCCTGAACATTCATGTGACGTGTTGATTATCGGTAGCGGCGCAGCCGGACTTTCACTGGCGCTACGCCTGGCTGACCAGCATCAGGTCATCGTTCTAAGTAAAGGCCCGGTAACGGAAGGTTCAACATTTTATGCCCAGGGCGGTATTGCCGCCGTGTTTGATGAAACTGACAGCATTGACTCGCATGTGGAAGACACATTGATTGCCGGGGCTGGTATTTGCGATCGCCATGCAGTTGAATTTGTCGCCAGCAATGCACGATCCTGTGTGCAATGGCTAATCGACCAGGGGGTGTTGTTTGATACCCACATTCAACCGAATGGCGAAGAAAGTTACCATCTGACCCGTGAAGGTGGACATAGTCACCGTCGTATTCTTCATGCCGCCGACGCCACCGGTAGAGAAGTAGAAACCACGCTGGTGAGCAAGGCGCTGAACCATCCGAATATTCGCGTGCTGGAGCGCAGCAACGCGGTTGATCTGATTGTTTCTGACAAAATTGGCCTGCCGGGCACGCGACGGGTTGTTGGCGCGTGGGTATGGAACCGTAATAAAGAAACGGTGGAAACCTGCCACGCAAAAGCGGTGGTGCTGGCAACCGGCGGTGCGTCGAAGGTTTATCAGTACACCACCAATCCGGATATTTCTTCTGGCGATGGCATTGCTATGGCGTGGCGCGCAGGCTGCCGGGTTGCCAATCTCGAATTTAATCAGTTCCACCCTACCGCGCTATATCACCCACAGGCACGCAATTTCCTGTTAACAGAAGCACTGCGCGGCGAAGGCGCTTATCTCAAGCGCCCGGATGGTACGCGTTTTATGCCCGATTTTGATGAGCGCGGCGAACTGGCCCCGCGCGATATTGTCGCCCGCGCCATTGACCATGAAATGAAACGCCTCGGCGCAGATTGTATGTTCCTTGATATCAGCCATAAGCCCGCCGATTTTATTCGCCAGCATTTCCCGATGATTTATGAAAAGCTGCTCGGGCTGGGGATTGATCTCACACAAGAACCGGTACCGATTGTGCCTGCTGCACATTATACCTGCGGTGGTGTAATGGTTGATGATCATGGGCGTACGGACGTCGAGGGCTTGTATGCCATTGGCGAGGTGAGTTATACCGGCTTACACGGCGCTAACCGCATGGCCTCGAATTCATTGCTGGAGTGTCTGGTCTATGGCTGGTCGGCGGCGGAAGATATCACCAGACGTATGCCTTATGCCCACGACATCAGTACGTTACCGCCGTGGGATGAAAGCCGCGTTGAGAACCCTGACGAACGGGTAGTAATTCAGCATAACTGGCACGAGCTACGTCTGTTTATGTGGGATTACGTTGGCATTGTGCGCACAACGAAGCGCCTGGAACGCGCCCTGCGGCGGATAACCATGCTCCAACAAGAAATAGACGAATATTACGCCCATTTCCGCGTCTCAAATAATTTGCTGGAGCTGCGTAATCTGGTACAGGTTGCCGAGTTGATTGTTCGCTGTGCAATGATGCGTAAAGAGAGTCGGGGGTTGCATTTCACGCTGGATTATCCGGAACTGCTCACCCATTCCGGTCCGTCGATCCTTTCCCCCGGCAATCATTACATAAACAGATAA", - "dna_sequence_length": 1623, - "functions": [ - "quinolinate synthase, L-aspartate oxidase (B protein) subunit" - ], - "id": "CDS_2558", - "location": [ - [ - "NC_000913", - 2710420, - "+", - 1623 - ] - ], - "md5": "d6dc08f16649011fe62e8c982028d071", - "parent_gene": "", - "protein_md5": "5032b65d1cea4cc0501af1d179a93673", - "protein_translation": "MNTLPEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERSNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLTQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMPYAHDISTLPPWDESRVENPDERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRITMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRKESRGLHFTLDYPELLTHSGPSILSPGNHYINR", - "protein_translation_length": 540, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2559" - ], - [ - "gene_synonym", - "NP_417070.2" - ], - [ - "gene_synonym", - "trmN6" - ], - [ - "gene_synonym", - "ASAP:ABE-0008473" - ], - [ - "gene_synonym", - "yfiC" - ], - [ - "gene_synonym", - "GeneID:947047" - ], - [ - "gene_synonym", - "b2575" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31825" - ], - [ - "gene_synonym", - "GI:90111461" - ], - [ - "gene_synonym", - "ECK2573" - ], - [ - "gene_synonym", - "EcoGene:EG11538" - ], - [ - "gene_synonym", - "trmN" - ] - ], - "dna_sequence": "ATGTCACAGTCTACATCCGTGCTTCGTCGTAATGGATTTACTTTTAAACAGTTTTTTGTTGCTCACGATCGCTGTGCGATGAAAGTGGGAACGGATGGTATTTTATTGGGCGCATGGGCACCGGTGGCTGGGGTAAAACGTTGCCTTGATATCGGCGCGGGTAGCGGGTTGCTGGCATTAATGCTGGCGCAGCGAACCGATGACAGCGTGATGATTGATGCAGTTGAACTGGAAAGTGAAGCTGCCGCGCAGGCGCAGGAAAATATCAACCAGTCCCCGTGGGCAGAGCGGATTAACGTCCATACGGCGGATATTCAGCAGTGGATCACACAGCAGACAGTACGCTTCGATTTAATCATCAGTAACCCACCTTACTATCAGCAGGGAGTAGAGTGCTCGACACCTCAACGGGAACAGGCTCGCTATACCACTACGCTTGATCACCCATCGTTGCTGACCTGTGCGGCGGAGTGCATTACCGAAGAGGGATTTTTCTGCGTAGTGCTGCCAGAGCAGATTGGTAATGGTTTTACGGAGCTGGCATTAAGCATGGGCTGGCATTTACGTTTGCGGACGGATGTGGCGGAAAACGAAGCGCGACTGCCGCATCGGGTGCTGCTGGCATTCTCCCCGCAGGCGGGAGAATGCTTTAGCGATCGCTTAGTCATTCGTGGGCCAGACCAGAACTATTCCGAAGCGTATACGGCGCTGACCCAGGCTTTTTATCTGTTTATGTAA", - "dna_sequence_length": 738, - "functions": [ - "tRNA1(Val) (adenine(37)-N6)-methyltransferase" - ], - "id": "CDS_2559", - "location": [ - [ - "NC_000913", - 2712764, - "-", - 738 - ] - ], - "md5": "2fd3e464d42d8122e6ea32e6a4a8e34a", - "parent_gene": "", - "protein_md5": "b8672ff2ac54aece971fef3de6ae292e", - "protein_translation": "MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARYTTTLDHPSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGPDQNYSEAYTALTQAFYLFM", - "protein_translation_length": 245, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417071.1" - ], - [ - "gene_synonym", - "srmB" - ], - [ - "gene_synonym", - "ASAP:ABE-0008478" - ], - [ - "gene_synonym", - "rhlA" - ], - [ - "gene_synonym", - "GI:16130501" - ], - [ - "gene_synonym", - "JW2560" - ], - [ - "gene_synonym", - "rbaB" - ], - [ - "gene_synonym", - "GeneID:947055" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21507" - ], - [ - "gene_synonym", - "b2576" - ], - [ - "gene_synonym", - "ECK2574" - ], - [ - "gene_synonym", - "EcoGene:EG10975" - ] - ], - "dna_sequence": "ATGACTGTAACGACTTTTTCCGAACTTGAACTCGACGAAAGCCTGCTGGAAGCCCTCCAGGATAAAGGTTTCACTCGCCCGACCGCCATTCAGGCTGCCGCCATTCCGCCTGCGCTCGATGGCCGTGATGTACTCGGTTCTGCGCCGACAGGCACCGGTAAAACGGCGGCGTATCTGCTGCCAGCGTTGCAGCACCTGCTCGATTTCCCGCGTAAGAAATCCGGTCCGCCGCGTATTTTGATCCTCACCCCAACTCGCGAGCTGGCGATGCAGGTGTCCGATCATGCCCGCGAACTGGCGAAACATACGCATCTGGATATCGCCACCATCACCGGCGGCGTAGCCTATATGAACCACGCGGAAGTGTTCAGCGAAAATCAGGACATCGTGGTCGCCACGACCGGACGTCTGCTGCAATACATAAAAGAAGAGAACTTCGATTGCCGCGCGGTTGAAACGCTGATCCTCGACGAAGCAGACCGTATGCTGGATATGGGCTTCGCTCAGGATATCGAACATATTGCTGGCGAAACGCGCTGGCGTAAACAGACCCTGCTCTTTTCGGCAACGCTGGAAGGCGATGCGATTCAGGACTTTGCCGAGCGTCTGCTGGAAGATCCGGTGGAAGTTTCTGCCAATCCCTCCACCCGTGAGCGCAAAAAAATTCATCAGTGGTATTACCGCGCCGATGATCTTGAGCATAAAACCGCGTTGCTGGTGCATCTGTTAAAACAGCCGGAAGCGACCCGCTCAATTGTGTTTGTGCGTAAGCGTGAGCGTGTGCATGAGCTGGCAAACTGGCTGCGCGAAGCGGGCATCAACAACTGCTATCTCGAAGGTGAGATGGTACAGGGCAAGCGTAACGAAGCGATCAAGCGTTTGACCGAAGGTCGCGTAAACGTACTGGTCGCAACCGATGTTGCCGCGCGCGGTATCGACATTCCTGACGTCAGCCACGTCTTTAACTTCGATATGCCGCGCAGTGGCGATACTTATTTGCACCGTATCGGACGTACCGCGCGCGCCGGTCGTAAAGGCACCGCAATTTCGCTGGTGGAAGCCCATGACCATCTGCTGCTGGGTAAAGTAGGCCGCTATATTGAAGAGCCAATTAAAGCTCGCGTTATTGATGAGTTACGCCCGAAAACGCGTGCGCCAAGCGAAAAGCAGACCGGCAAGCCATCGAAGAAAGTACTGGCTAAACGTGCTGAGAAGAAAAAAGCTAAAGAGAAAGAGAAGCCGCGGGTGAAAAAACGCCATCGCGACACCAAAAATATTGGTAAGCGCCGTAAACCAAGCGGAACGGGCGTGCCACCGCAAACGACAGAAGAGTAA", 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"gene_synonym", - "yfiE" - ], - [ - "gene_synonym", - "NP_417072.4" - ], - [ - "gene_synonym", - "b2577" - ], - [ - "gene_synonym", - "GeneID:947064" - ], - [ - "gene_synonym", - "ASAP:ABE-0008483" - ], - [ - "gene_synonym", - "GI:90111462" - ], - [ - "gene_synonym", - "ECK2575" - ] - ], - "dna_sequence": "ATGGATCTGCGCCGTTTTATTACGCTTAAAACCGTGGTGGAAGAGGGTTCCTTTTTGCGAGCTTCGCAAAAATTGTGCTGTACACAATCGACGGTGACTTTTCATATTCAGCAGCTTGAGCAGGAGTTTTCAGTCCAGTTATTTGAGAAAATTGGCCGACGGATGTGCCTTACCCGCGAAGGAAAAAAGTTGCTGCCGCACATTTATGAACTTACCCGAGTGATGGATACGCTTCGTGAGGCTGCCAAAAAGGAGTCAGATCCGGACGGGGAACTACGCGTTGTTTCGGGCGAAACGTTGCTCTCTTACCGAATGCCGCAGGTGTTGCAGCGTTTTCGGCAACGCGCCCCAAAAGTGCGTTTATCGTTGCAGTCGCTGAACTGTTACGTGATCCGTGATGCGCTACTGAATGATGAGGCCGATGTTGGCGTCTTTTATCGTGTAGGGAATGATGATGCTCTGAATCGACGAGAGTTGGGTGAACAATCACTGGTGCTGGTGGCTTCACCGCAAATTGCAGATGTCGATTTTACTGAGCCGGGAAGACATAACGCCTGTAGCTTTATTATCAACGAACCGCAATGTGTCTTCCGGCAGATATTTGAGAGCACGCTGCGTCAGCGGCGGATCACGGTGGAAAACACCATTGAGCTTATAAGTATCGAAAGCATCAAGCGTTGTGTCGCGGCGAATATCGGGGTCAGCTACCTACCGCGCTTTGCGGTGGCAAAAGAGTTGGAGTGCGGAGAATTAATTGAATTGCCTTTTGGCGAACAGTCGCAGACCATTACGGCCATGTGCGCACATCATGCTGGAAAAGCGGTTAGCCCGGCGATGCACACTTTTATTCAGTGTGTTGAAGAGAGTTTTGTGGCTGGATAA", - "dna_sequence_length": 882, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_2561", - "location": [ - [ - "NC_000913", - 2715320, - "-", - 882 - ] - ], - "md5": "a1d08ea166aa44575ec03c6b27667676", - "parent_gene": "", - "protein_md5": "6cc9f11ddd8e3e2a0b52af9b4aa6a597", - "protein_translation": "MDLRRFITLKTVVEEGSFLRASQKLCCTQSTVTFHIQQLEQEFSVQLFEKIGRRMCLTREGKKLLPHIYELTRVMDTLREAAKKESDPDGELRVVSGETLLSYRMPQVLQRFRQRAPKVRLSLQSLNCYVIRDALLNDEADVGVFYRVGNDDALNRRELGEQSLVLVASPQIADVDFTEPGRHNACSFIINEPQCVFRQIFESTLRQRRITVENTIELISIESIKRCVAANIGVSYLPRFAVAKELECGELIELPFGEQSQTITAMCAHHAGKAVSPAMHTFIQCVEESFVAG", - "protein_translation_length": 293, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2562" - ], - [ - "gene_synonym", - "yfiK" - ], - [ - "gene_synonym", - "ASAP:ABE-0008487" - ], - [ - "gene_synonym", - "GI:16130503" - ], - [ - "gene_synonym", - "GeneID:947065" - ], - [ - "gene_synonym", - "eamB" - ], - [ - "gene_synonym", - "NP_417073.1" - ], - [ - "gene_synonym", - "b2578" - ], - [ - "gene_synonym", - "ECK2576" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38101" - ], - [ - "gene_synonym", - "EcoGene:EG12445" - ] - ], - "dna_sequence": "GTGACACCGACCCTTTTAAGTGCTTTTTGGACTTACACCCTGATTACCGCTATGACGCCAGGACCGAACAATATTCTCGCCCTTAGCTCTGCTACGTCGCATGGATTTCGTCAAAGTACCCGCGTGCTGGCAGGGATGAGTCTGGGATTTTTGATTGTGATGTTACTGTGTGCGGGCATTTCATTTTCACTGGCAGTGATTGACCCGGCAGCGGTACACCTTTTGAGTTGGGCGGGGGCGGCATATATTGTCTGGCTGGCGTGGAAAATCGCCACCAGCCCAACAAAGGAAGACGGACTTCAGGCAAAACCAATCAGCTTTTGGGCCAGCTTTGCTTTGCAGTTTGTGAACGTCAAAATCATTTTGTACGGTGTTACGGCACTGTCGACGTTTGTTCTGCCGCAAACACAGGCGTTAAGCTGGGTAGTTGGCGTCAGCGTTTTGCTGGCGATGATTGGGACGTTTGGCAATGTGTGCTGGGCGCTGGCGGGGCATCTGTTTCAGCGATTGTTTCGCCAGTATGGTCGCCAGTTAAATATCGTGCTTGCCCTGTTGCTGGTCTATTGCGCGGTACGCATTTTCTATTAA", - "dna_sequence_length": 588, - "functions": [ - "cysteine and O-acetylserine exporter" - ], - "id": "CDS_2562", - "location": [ - [ - "NC_000913", - 2715423, - "+", - 588 - ] - ], - "md5": "8aa05650016a3e47c47fc2f391bf2649", - "parent_gene": "", - "protein_md5": "1c539ae0f9b09fc114fce2bcb5d60cc5", - "protein_translation": "MTPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLAGMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQAKPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCWALAGHLFQRLFRQYGRQLNIVLALLLVYCAVRIFY", - "protein_translation_length": 195, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11784" - ], - [ - "gene_synonym", - "JW2563" - ], - [ - "gene_synonym", - "grcA" - ], - [ - "gene_synonym", - "ASAP:ABE-0008489" - ], - [ - "gene_synonym", - "yfiD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68066" - ], - [ - "gene_synonym", - "GI:16130504" - ], - [ - "gene_synonym", - "NP_417074.1" - ], - [ - "gene_synonym", - "b2579" - ], - [ - "gene_synonym", - "GeneID:947068" - ], - [ - "gene_synonym", - "ECK2577" - ] - ], - "dna_sequence": "ATGATTACAGGTATCCAGATTACTAAAGCCGCTAACGACGATCTGCTGAACTCTTTCTGGCTGCTGGACAGCGAAAAAGGCGAAGCGCGTTGCATCGTTGCAAAAGCAGGTTATGCAGAAGATGAAGTGGTTGCAGTAAGCAAACTGGGTGACATTGAATACCGTGAAGTTCCAGTAGAAGTGAAACCAGAAGTTCGCGTTGAAGGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGCGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACTCTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAAAGCCTGTAA", - "dna_sequence_length": 384, - "functions": [ - "autonomous glycyl radical cofactor" - ], - "id": "CDS_2563", - "location": [ - [ - "NC_000913", - 2716449, - "-", - 384 - ] - ], - "md5": "ebab599d07f498eef9348c9c1f81b7b5", - "parent_gene": "", - "protein_md5": "af241637a7d03f318284ba8a7d712c26", - "protein_translation": "MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVVAVSKLGDIEYREVPVEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSGYAVRFNSLTPEQQRDVIARTFTESL", - "protein_translation_length": 127, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417075.1" - ], - [ - "gene_synonym", - "JW2564" - ], - [ - "gene_synonym", - "ASAP:ABE-0008495" - ], - [ - "gene_synonym", - "GI:16130505" - ], - [ - "gene_synonym", - "ECK2578" - ], - [ - "gene_synonym", - "EcoGene:EG11058" - ], - [ - "gene_synonym", - "ung" - ], - [ - "gene_synonym", - "GeneID:947067" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P12295" - ], - [ - "gene_synonym", - "b2580" - ] - ], - "dna_sequence": "ATGGCTAACGAATTAACCTGGCATGACGTGCTGGCTGAAGAGAAGCAGCAACCCTATTTTCTTAATACCCTTCAGACCGTCGCCAGCGAGCGGCAGTCCGGCGTCACTATCTACCCACCACAAAAAGATGTCTTTAACGCGTTCCGCTTTACAGAGTTGGGTGACGTTAAAGTGGTGATTCTCGGCCAGGATCCTTATCACGGACCGGGACAGGCGCATGGTCTGGCATTTTCCGTTCGTCCCGGCATTGCCATTCCTCCGTCATTATTGAATATGTATAAAGAGCTGGAAAATACTATTCCGGGCTTCACCCGCCCTAATCATGGTTATCTTGAAAGCTGGGCGCGTCAGGGCGTTCTGCTACTCAATACTGTGTTGACGGTACGCGCAGGTCAGGCGCATTCCCACGCCAGCCTCGGCTGGGAAACCTTCACCGATAAAGTGATCAGCCTGATTAACCAGCATCGCGAAGGCGTGGTGTTTTTGTTGTGGGGATCGCATGCGCAAAAGAAAGGGGCGATTATAGATAAGCAACGCCATCATGTACTGAAAGCACCGCATCCGTCGCCGCTTTCGGCGCATCGTGGATTCTTTGGCTGCAACCATTTTGTGCTGGCAAATCAGTGGCTGGAACAACGTGGCGAGACGCCGATTGACTGGATGCCAGTATTACCGGCAGAGAGTGAGTAA", - "dna_sequence_length": 690, - "functions": [ - "uracil-DNA-glycosylase" - ], - "id": "CDS_2564", - "location": [ - [ - "NC_000913", - 2716754, - "+", - 690 - ] - ], - "md5": "029c362fdd787d079a7ecd97e256a718", - "parent_gene": "", - "protein_md5": "c54e4c0a24c178ca13e44a4881f22111", - "protein_translation": "MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPIDWMPVLPAESE", - "protein_translation_length": 229, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11786" - ], - [ - "gene_synonym", - "ASAP:ABE-0008497" - ], - [ - "gene_synonym", - "JW2565" - ], - [ - "gene_synonym", - "yfiF" - ], - [ - "gene_synonym", - "NP_417076.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGJ5" - ], - [ - "gene_synonym", - "GI:16130506" - ], - [ - "gene_synonym", - "ECK2579" - ], - [ - "gene_synonym", - "GeneID:947066" - ], - [ - "gene_synonym", - "b2581" - ] - ], - "dna_sequence": "ATGAACGATGAAATGAAAGGTAAAAGCGGCAAGGTCAAAGTGATGTATGTCCGCAGTGATGATGATTCTGATAAACGTACCCACAACCCGCGTACCGGGAAAGGGGGCGGGCGTCCAGGAAAATCTCGTGCTGACGGTGGCCGTCGCCCCGCCCGCGATGACAAACAGAGTCAGCCCCGTGACCGCAAGTGGGAAGATTCGCCGTGGCGCACGGTTTCCCGCGCGCCGGGTGATGAGACGCCGGAAAAGGCCGATCACGGTGGCATCAGTGGTAAAAGTTTTATTGATCCGGAAGTGTTGCGTCGTCAGCGTGCGGAAGAAACCCGCGTCTACGGCGAAAATGCATGTCAGGCACTTTTCCAGAGCCGTCCGGAAGCGATTGTTCGCGCCTGGTTTATCCAGAGTGTAACGCCGCGTTTTAAAGAAGCTTTGCGCTGGATGGCAGCAAACCGCAAAGCGTACCATGTGGTGGATGAAGCGGAATTGACAAAAGCGTCAGGCACGGAACATCACGGCGGCGTTTGCTTCTTGATCAAAAAGCGTAACGGTACAACCGTGCAGCAGTGGGTAAGCCAGGCAGGCGCGCAGGATTGCGTTCTGGCACTGGAAAACGAATCTAACCCGCATAACCTGGGTGGCATGATGCGCAGCTGCGCGCACTTCGGCGTGAAAGGTGTCGTGGTGCAGGATGCGGCACTGCTGGAGTCGGGGGCGGCTATCCGTACCGCAGAAGGCGGCGCAGAGCACGTTCAGCCGATTACTGGCGACAACATTGTTAACGTGCTGGATGATTTCCGTCAGGCAGGTTACACCGTAGTGACCACTTCCAGCGAGCAGGGTAAACCGCTGTTCAAAACTAGTCTGCCAGCGAAAATGGTACTGGTGCTGGGTCAGGAATATGAAGGGTTACCGGATGCCGCACGCGATCCGAACGATCTGCGCGTGAAGATTGACGGTACGGGCAACGTTGCCGGGCTGAATATCTCTGTCGCAACCGGCGTTTTGCTTGGTGAATGGTGGCGTCAGAATAAAGCCTGA", 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"ECK2580" - ], - [ - "gene_synonym", - "GI:16130507" - ], - [ - "gene_synonym", - "trxC" - ], - [ - "gene_synonym", - "EcoGene:EG11887" - ], - [ - "gene_synonym", - "NP_417077.1" - ], - [ - "gene_synonym", - "b2582" - ] - ], - "dna_sequence": "ATGAATACCGTTTGTACCCATTGTCAGGCCATCAATCGCATTCCCGACGATCGGATCGAAGATGCGGCAAAATGCGGACGCTGCGGTCACGACTTGTTTGACGGAGAGGTGATTAATGCGACCGGTGAAACACTCGACAAATTGCTGAAGGATGATCTACCTGTGGTGATCGACTTCTGGGCACCGTGGTGCGGCCCCTGCCGTAATTTCGCACCAATTTTTGAAGATGTCGCGCAAGAGCGTAGCGGTAAAGTGCGCTTTGTGAAAGTGAATACCGAAGCTGAACGTGAATTGAGCAGTCGCTTTGGAATTCGTAGTATACCGACGATCATGATTTTCAAAAACGGTCAGGTTGTCGACATGCTTAATGGCGCAGTACCGAAAGCGCCGTTCGATAGCTGGCTGAACGAATCTCTTTAA", - "dna_sequence_length": 420, - "functions": [ - "thioredoxin 2" - ], - "id": "CDS_2566", - "location": [ - [ - "NC_000913", - 2718735, - "+", - 420 - ] - ], - "md5": "25102d41f7d9a0410db6769a0c962586", - "parent_gene": "", - "protein_md5": "e9d50cfbfaea17e8ebb59f9add77f07a", - "protein_translation": "MNTVCTHCQAINRIPDDRIEDAAKCGRCGHDLFDGEVINATGETLDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL", - "protein_translation_length": 139, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5409" - ], - [ - "gene_synonym", - "ASAP:ABE-0008503" - ], - [ - "gene_synonym", - "GeneID:947057" - ], - [ - "gene_synonym", - "ECK2581" - ], - [ - "gene_synonym", - "NP_417078.4" - ], - [ - "gene_synonym", - "GI:90111463" - ], - [ - "gene_synonym", - "EcoGene:EG14223" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47319" - ], - [ - "gene_synonym", - "yfiP" - ], - [ - "gene_synonym", - "b2583" - ] - ], - "dna_sequence": "ATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGTAATCGCGTTCGTCGCTGCCAACGCTGTCTTTTGCCAGAGAAATTATGTCTCTGTTCGACAATTACCCCAGCACAAGCAAAAAGTCGCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTCATTGCTGATATTTTGCCTGATACCGTTGCGTTTCAATGGTCGCGTACCGAACCCTCGCAGGATTTGCTGGAGTTGGTGCAAAACCCGGACTATCAGCCAATGGTGGTCTTTCCCGCTTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTAAGCCACCGCTGTTTATCATGCTCGATGGTACCTGGCCGGAAGCTCGCAAGATGTTTCGTAAAAGTCCGTATCTGGATAATCTTCCCGTCATTTCCGTCGATCTTTCCCGGCTTTCTGCCTATCGCCTGCGTGAAGCCCAGGCTGAAGGCCAATATTGTACTGCCGAGGTAGCCATCGCACTGTTAGATATGGCCGGCGATACCGGGGCGGCGGCAGGGTTAGGCGAGCATTTTACCCGCTTTAAAACACGCTATCTGGCAGGAAAAACGCAACATCTGGGTAGCATCACAGCAGAACAGTTAGAAAGCGTTTAA", - "dna_sequence_length": 699, - "functions": [ - "DTW domain protein" - ], - "id": "CDS_2567", - "location": [ - [ - "NC_000913", - 2719223, - "+", - 699 - ] - ], - "md5": "c249d6753f5d80aa44fa5d888d91abdf", - "parent_gene": "", - "protein_md5": "0cc48a60b246695cb57422c52f7e5c5c", - "protein_translation": "MTENAVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCSTITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLELVQNPDYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVISVDLSRLSAYRLREAQAEGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKTQHLGSITAEQLESV", - "protein_translation_length": 232, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130509" - ], - [ - "gene_synonym", - "pat" - ], - [ - "gene_synonym", - "ASAP:ABE-0008506" - ], - [ - "gene_synonym", - "JW2568" - ], - [ - "gene_synonym", - "patZ" - ], - [ - "gene_synonym", - "GeneID:947056" - ], - [ - "gene_synonym", - "EcoGene:EG14224" - ], - [ - "gene_synonym", - "pka" - ], - [ - "gene_synonym", - "ECK2582" - ], - [ - "gene_synonym", - "b2584" - ], - [ - "gene_synonym", - "NP_417079.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76594" - ], - [ - "gene_synonym", - "yfiQ" - ] - ], - "dna_sequence": "ATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGGTAATTGGCGCGTCGATGAAACCCAATCGCGCAGGTTACCTGATGATGCGTAACCTGCTGGCGGGAGGCTTTAACGGACCGGTACTCCCGGTGACGCCAGCCTGGAAAGCGGTGTTGGGTGTGTTGGCCTGGCCGGATATTGCCAGCTTGCCCTTTACACCCGACCTTGCGGTTTTATGTACCAATGCCAGCCGTAATCTTGCTCTTCTGGAAGAGCTCGGCGAGAAAGGCTGTAAAACCTGCATTATTCTTTCCGCCCCGGCATCGCAACACGAAGATCTCCGCGCCTGCGCCCTGCGCCATAACATGCGCCTGCTTGGACCAAACAGTCTGGGTTTACTGGCTCCCTGGCAAGGTCTGAATGCCAGCTTTTCGCCTGTGCCGATTAAACGCGGCAAGCTGGCGTTTATTTCGCAATCGGCTGCCGTCTCCAACACCATCCTCGACTGGGCGCAACAGCGTAAGATGGGCTTTTCCTACTTTATTGCGCTCGGCGACAGCCTGGATATCGACGTTGATGAATTGCTTGACTATCTGGCACGCGACAGTAAAACCAGCGCCATCCTGCTCTATCTCGAACAGTTAAGCGACGCGCGACGCTTTGTTTCGGCGGCCCGTAGTGCCTCGCGTAATAAACCGATTCTGGTGATTAAAAGCGGACGTAGCCCGGCGGCACAGCGACTGCTCAACACGACGGCAGGAATGGACCCGGCATGGGATGCGGCTATTCAGCGTGCCGGTTTGTTGCGGGTACAGGACACCCACGAGCTGTTTTCGGCGGTGGAAACCCTTAGCCATATGCGCCCGCTACGTGGCGACCGGCTGATGATTATCAGCAACGGTGCTGCGCCTGCCGCGCTGGCGCTGGATGCCTTATGGTCACGCAATGGCAAGCTGGCAACGCTAAGCGAAGAAACCTGCCAGAAACTGCGCGATGCACTGCCAGAACATGTGGCAATATCTAACCCGCTCGATCTACGCGATGACGCCAGCAGTGAGCACTATATTAAAACGCTGGATATTCTGCTCCACAGCCAGGATTTTGACGCGCTGATGGTTATTCATTCGCCCAGCGCCGCTGCTCCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGCTACGTCGCTCGATACCCATGAAGTTCAGCCCATCCTGCAAGCGTATGGCATGAACACGCTCCCTACCTGGATTGCCAGCGATAGCACCGAAGCGGTGCATATTGCCGAACAGATTGGTTATCCGGTGGCGCTGAAATTGCGTTCGCCGGATATTCCACATAAATCGGAAGTTCAGGGCGTCATGCTTTACCTGCGTACAGCCAATGAAGTCCAGCAAGCGGCGAACGCTATTTTCGATCGCGTAAAAATGGCCTGGCCACAGGCGCGGGTCCACGGCCTGTTGGTGCAAAGTATGGCTAACCGTGCTGGCGCTCAGGAGTTGCGGGTTGTGGTTGAGCACGATCCGGTTTTCGGGCCGTTGATCATGCTGGGTGAAGGCGGTGTGGAGTGGCGTCCTGAAGATCAAGCCGTCGTCGCACTGCCGCCGCTGAACATGAACCTGGCCCGCTATCTGGTTATTCAGGGGATCAAAAGTAAAAAGATTCGTGCGCGCAGTGCGCTACGCCCATTGGATGTTGCAGGCTTGAGCCAGCTTCTGGTGCAGGTTTCCAACTTGATTGTCGATTGCCCGGAAATTCAGCGTCTGGATATTCATCCTTTGCTGGCTTCTGGCAGTGAATTTACCGCGCTGGATGTCACGCTGGATATCTCGCCGTTTGAAGGCGATAACGAGAGTCGGCTGGCAGTGCGCCCTTATCCGCATCAGCTGGAAGAATGGGTAGAATTGAAAAACGGTGAACGCTGCTTGTTCCGCCCGATTTTGCCAGAAGATGAGCCACAACTTCAGCAATTCATTTCGCGAGTCACCAAAGAAGATCTTTATTACCGCTACTTTAGCGAGATCAACGAATTTACCCATGAAGATTTAGCCAACATGACACAGATCGACTACGATCGGGAAATGGCGTTTGTAGCGGTACGACGTATTGATCAAACGGAAGAGATCCTCGGCGTCACGCGTGCGATTTCCGATCCTGATAACATCGATGCCGAATTTGCTGTACTGGTTCGCTCGGATCTCAAAGGGTTAGGCTTAGGTCGACGCTTAATGGAAAAGTTGATTACCTATACGCGAGATCACGGACTACAACGTCTGAATGGTATTACGATGCCAAACAATCGTGGCATGGTGGCGCTAGCCCGCAAGCTCGGGTTTAACGTTGATATCCAGCTCGAAGAGGGGATCGTTGGGCTTACGCTAAATCTTGCCCAGCGCGAGGAATCATGA", - "dna_sequence_length": 2661, - "functions": [ - "protein lysine acetyltransferase" - ], - "id": "CDS_2568", - "location": [ - [ - "NC_000913", - 2719953, - "+", - 2661 - ] - ], - "md5": "216a0fe5b13a68ee215873e7c4cef4cf", - "parent_gene": "", - "protein_md5": "db3e7c99a4483274f13e77a0ccdcc479", - "protein_translation": "MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPVLPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSAPASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVSNTILDWAQQRKMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFVSAARSASRNKPILVIKSGRSPAAQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSAVETLSHMRPLRGDRLMIISNGAAPAALALDALWSRNGKLATLSEETCQKLRDALPEHVAISNPLDLRDDASSEHYIKTLDILLHSQDFDALMVIHSPSAAAPATESAQVLIEAVKHHPRSKYVSLLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLRETPALPSNLTSNTAEAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARVHGLLVQSMANRAGAQELRVVVEHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASGSEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVELKNGERCLFRPILPEDEPQLQQFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTRAISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVALARKLGFNVDIQLEEGIVGLTLNLAQREES", - "protein_translation_length": 886, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2569" - ], - [ - "gene_synonym", - "pssA" - ], - [ - "gene_synonym", - "EcoGene:EG10781" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23830" - ], - [ - "gene_synonym", - "ECK2583" - ], - [ - "gene_synonym", - "pss" - ], - [ - "gene_synonym", - "NP_417080.4" - ], - [ - "gene_synonym", - "b2585" - ], - [ - "gene_synonym", - "GI:90111464" - ], - [ - "gene_synonym", - "ASAP:ABE-0008510" - ], - [ - "gene_synonym", - "GeneID:947059" - ] - ], - "dna_sequence": "ATGTTGTCAAAATTTAAGCGTAATAAACATCAACAACACCTTGCCCAACTACCCAAGATTTCTCAATCAGTTGATGATGTCGATTTCTTTTACGCTCCCGCCGACTTCCGGGAGACGCTGCTGGAAAAAATAGCCAGCGCGAAGCAGCGCATTTGCATTGTCGCCCTGTATCTCGAACAGGATGACGGTGGCAAAGGCATTCTGAACGCGTTGTATGAGGCTAAAAGGCAGCGTCCGGAACTGGATGTGCGGGTGCTGGTCGACTGGCATCGTGCACAACGTGGACGCATTGGCGCTGCGGCATCTAACACTAACGCTGACTGGTACTGCCGCATGGCGCAGGAAAATCCGGGCGTAGATGTTCCGGTTTATGGCGTTCCAATCAATACTCGTGAAGCCCTTGGTGTTCTGCACTTTAAAGGCTTTATCATCGACGATAGCGTACTTTATAGCGGTGCCAGCCTGAACGATGTTTACCTGCATCAGCACGATAAATATCGCTACGACCGTTATCATCTGATCCGTAACCGTAAGATGTCAGACATTATGTTTGAATGGGTTACACAGAATATTATGAATGGCCGCGGCGTTAATCGTCTGGATGATGTTAATCGGCCAAAAAGCCCGGAAATCAAGAACGATATTCGTCTGTTCCGCCAGGAGCTGCGTGATGCCGCTTATCATTTCCAGGGCGATGCCGACAACGATCAGCTTTCTGTAACGCCGCTAGTGGGGCTGGGGAAATCGAGTCTGTTGAACAAGACCATTTTCCATCTTATGCCTTGTGCCGAGCAGAAACTAACCATCTGTACGCCATACTTCAACCTGCCAGCAATCCTTGTGCGCAATATTATCCAGTTGCTGCGCGAAGGGAAAAAGGTCGAAATTATTGTTGGTGATAAAACCGCGAATGACTTCTACATTCCGGAAGATGAACCTTTCAAGATAATTGGCGCATTGCCTTATCTCTATGAGATCAATCTGCGTCGTTTCCTGAGCCGTTTGCAGTATTACGTCAATACTGACCAGCTAGTGGTTCGGTTATGGAAAGATGACGACAACACCTATCACCTGAAAGGGATGTGGGTTGATGATAAGTGGATGTTGATCACCGGTAATAACCTGAACCCGCGCGCCTGGCGTCTGGATCTGGAAAACGCCATTTTGATCCACGATCCGCAACTTGAGCTGGCGCCACAGCGAGAGAAAGAACTGGAGCTGATCCGCGAGCATACCACCATCGTTAAGCACTATCGCGATCTGCAAAGTATTGCCGATTATCCGGTGAAGGTTCGTAAACTCATCCGCCGTTTGCGCCGTATCCGCATCGACCGATTAATTAGCCGCATCCTGTAA", - "dna_sequence_length": 1356, - "functions": [ - "phosphatidylserine synthase", - "CDP-diacylglycerol-serine O-phosphatidyltransferase" - ], - "id": "CDS_2569", - "location": [ - [ - "NC_000913", - 2722727, - "+", - 1356 - ] - ], - "md5": "7271290e4dfaaac7cdf71bdbec35f153", - "parent_gene": "", - "protein_md5": "733b113d00017964d4c90f6e6325c31c", - "protein_translation": "MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYAPADFRETLLEKIASAKQRICIVALYLEQDDGGKGILNALYEAKRQRPELDVRVLVDWHRAQRGRIGAAASNTNADWYCRMAQENPGVDVPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYLHQHDKYRYDRYHLIRNRKMSDIMFEWVTQNIMNGRGVNRLDDVNRPKSPEIKNDIRLFRQELRDAAYHFQGDADNDQLSVTPLVGLGKSSLLNKTIFHLMPCAEQKLTICTPYFNLPAILVRNIIQLLREGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRRFLSRLQYYVNTDQLVVRLWKDDDNTYHLKGMWVDDKWMLITGNNLNPRAWRLDLENAILIHDPQLELAPQREKELELIREHTTIVKHYRDLQSIADYPVKVRKLIRRLRRIRIDRLISRIL", - "protein_translation_length": 451, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2570" - ], - [ - "gene_synonym", - "yfiM" - ], - [ - "gene_synonym", - "GI:145698302" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46126" - ], - [ - "gene_synonym", - "GeneID:947060" - ], - [ - "gene_synonym", - "ECK2584" - ], - [ - "gene_synonym", - "EcoGene:EG12857" - ], - [ - "gene_synonym", - "NP_417081.2" - ], - [ - "gene_synonym", - "b2586" - ], - [ - "gene_synonym", - "ASAP:ABE-0008513" - ] - ], - "dna_sequence": "TTGCGTATTCTTTTTGTCTGTTCGCTATTGTTACTTTCTGGATGCAGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCATCAGGGGATGAGCCGGGATCGCAGTGCCATGTTTGGATTGATGTTCTCTGTCAGTTTGGGGGCGTCAAAAGAGCTTTGGGATAGCCGCCCCGAAGGGAGCGGCTGGAGCTGGAAGGATTTGGCCTGGGATGTCGCCGGTGCAAGCACCGGCTATACCGTCTGGCAACTGACCCGTCACTAA", - "dna_sequence_length": 324, - "functions": [ - "putative lipoprotein" - ], - "id": "CDS_2570", - "location": [ - [ - "NC_000913", - 2724128, - "+", - 324 - ] - ], - "md5": "46b38815eec7773165bf59bd248ec143", - "parent_gene": "", - "protein_md5": "85109cb0c760d3577850bc479c1bc0f1", - "protein_translation": "MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVWQLTRH", - "protein_translation_length": 107, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2571" - ], - [ - "gene_synonym", - "ASAP:ABE-0008515" - ], - [ - "gene_synonym", - "kgtP" - ], - [ - "gene_synonym", - "EcoGene:EG10522" - ], - [ - "gene_synonym", - "GI:16130512" - ], - [ - "gene_synonym", - "NP_417082.1" - ], - [ - "gene_synonym", - "ECK2585" - ], - [ - "gene_synonym", - "witA" - ], - [ - "gene_synonym", - "GeneID:947069" - ], - [ - "gene_synonym", - "b2587" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEX3" - ] - ], - "dna_sequence": "ATGGCTGAAAGTACTGTAACGGCAGACAGCAAACTGACAAGTAGTGATACTCGTCGCCGCATTTGGGCGATTGTGGGGGCCTCTTCAGGTAATCTGGTCGAGTGGTTCGATTTCTATGTCTACTCGTTCTGTTCACTCTACTTTGCCCACATCTTCTTCCCTTCCGGGAACACGACGACTCAACTACTACAAACAGCAGGTGTTTTTGCTGCGGGATTCCTGATGCGCCCAATAGGCGGTTGGCTATTTGGCCGCATAGCCGATAAACATGGTCGCAAAAAATCGATGCTGTTATCGGTGTGTATGATGTGTTTCGGATCGCTGGTTATCGCCTGCCTCCCAGGTTATGAAACTATAGGTACGTGGGCTCCGGCATTATTGCTTCTCGCTCGTTTATTTCAGGGATTATCTGTTGGCGGAGAATATGGCACCAGCGCCACCTATATGAGTGAAGTTGCCGTTGAAGGGCGCAAAGGTTTTTACGCATCATTTCAGTATGTGACGTTGATCGGCGGACAACTGCTAGCCCTACTGGTTGTCGTGGTTTTACAACACACCATGGAAGACGCTGCACTCAGAGAGTGGGGATGGCGTATTCCTTTCGCGTTAGGAGCTGTGTTAGCTGTTGTGGCGTTGTGGTTACGTCGTCAGTTAGATGAAACTTCGCAACAAGAAACGCGCGCTTTAAAAGAAGCTGGATCTCTGAAAGGATTATGGCGCAATCGCCGTGCATTCATCATGGTTCTCGGTTTTACCGCTGCGGGCTCCCTTTGTTTCTATACCTTCACTACTTATATGCAGAAGTATCTGGTAAATACTGCGGGAATGCATGCCAACGTGGCGAGTGGCATTATGACTGCCGCATTGTTTGTATTCATGCTTATTCAACCACTCATTGGCGCGCTGTCGGATAAGATTGGTCGCCGTACCTCAATGTTATGTTTCGGTTCGCTGGCAGCCATTTTTACCGTTCCTATTCTCTCAGCATTGCAAAACGTTTCCTCGCCTTATGCCGCTTTTGGTCTGGTGATGTGTGCCCTGCTGATAGTGAGTTTTTATACATCAATCAGTGGAATACTGAAGGCTGAGATGTTCCCGGCACAGGTTCGCGCATTAGGCGTTGGTCTGTCATATGCGGTCGCTAATGCTATATTTGGTGGTTCGGCGGAGTACGTAGCGTTGTCGCTGAAATCAATAGGAATGGAAACAGCCTTCTTCTGGTATGTGACCTTGATGGCCGTGGTGGCGTTTCTGGTTTCTTTGATGCTACATCGCAAAGGGAAGGGGATGCGTCTTTAG", - "dna_sequence_length": 1299, - "functions": [ - "alpha-ketoglutarate transporter" - ], - "id": "CDS_2571", - "location": [ - [ - "NC_000913", - 2725746, - "-", - 1299 - ] - ], - "md5": "e245c5eed26aee73b9ed54fdcc2e3fcf", - "parent_gene": "", - "protein_md5": "79418c8d83875c099c912df867d9aa6e", - "protein_translation": "MAESTVTADSKLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQHTMEDAALREWGWRIPFALGAVLAVVALWLRRQLDETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAAIFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANAIFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLMLHRKGKGMRL", - "protein_translation_length": 432, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2573" - ], - [ - "gene_synonym", - "GeneID:947077" - ], - [ - "gene_synonym", - "NP_417083.1" - ], - [ - "gene_synonym", - "GI:16130513" - ], - [ - "gene_synonym", - "b2592" - ], - [ - "gene_synonym", - "ECK2590" - ], - [ - "gene_synonym", - "htpM" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63284" - ], - [ - "gene_synonym", - "clpB" - ], - [ - "gene_synonym", - "ASAP:ABE-0008527" - ], - [ - "gene_synonym", - "EcoGene:EG10157" - ] - ], - "dna_sequence": "ATGCGTCTGGATCGTCTTACTAATAAATTCCAGCTTGCTCTTGCCGATGCCCAATCACTTGCACTCGGGCACGACAACCAATTTATCGAACCACTTCATTTAATGAGCGCCCTGCTGAATCAGGAAGGGGGTTCGGTTAGTCCTTTATTAACATCCGCTGGCATAAATGCTGGCCAGTTGCGCACAGATATCAATCAGGCATTAAATCGTTTACCGCAGGTTGAAGGTACTGGTGGTGATGTCCAGCCATCACAGGATCTGGTGCGCGTTCTTAATCTTTGCGACAAGCTGGCGCAAAAACGTGGTGATAACTTTATCTCGTCAGAACTGTTCGTTCTGGCGGCACTTGAGTCTCGCGGCACGCTGGCCGACATCCTGAAAGCAGCAGGGGCGACCACCGCCAACATTACTCAAGCGATTGAACAAATGCGTGGAGGTGAAAGCGTGAACGATCAAGGTGCTGAAGACCAACGTCAGGCTTTGAAAAAATATACCATCGACCTTACCGAACGAGCCGAACAGGGCAAACTCGATCCGGTGATTGGTCGTGATGAAGAAATTCGCCGTACCATTCAGGTGCTGCAACGTCGTACTAAAAATAACCCGGTACTGATTGGTGAACCCGGCGTCGGTAAAACTGCCATCGTTGAAGGTCTGGCGCAGCGTATTATCAACGGCGAAGTGCCGGAAGGGTTGAAAGGCCGCCGGGTACTGGCGCTGGATATGGGCGCGCTGGTGGCTGGGGCGAAATATCGCGGTGAGTTTGAAGAACGTTTAAAAGGCGTGCTTAACGATCTTGCCAAACAGGAAGGCAACGTCATCCTATTTATCGACGAATTACATACCATGGTCGGCGCGGGTAAAGCCGATGGCGCAATGGACGCCGGAAACATGCTGAAACCGGCGCTGGCGCGTGGTGAATTGCACTGCGTAGGTGCCACGACGCTTGACGAATATCGCCAGTACATTGAAAAAGATGCTGCGCTGGAACGTCGTTTCCAGAAAGTGTTTGTTGCCGAGCCTTCTGTTGAAGATACCATTGCGATTCTGCGTGGCCTGAAAGAACGTTACGAATTGCACCACCATGTGCAAATTACTGACCCGGCAATTGTTGCAGCGGCGACGTTGTCTCATCGCTACATTGCTGACCGTCAGCTGCCGGATAAAGCCATCGACCTGATCGATGAAGCAGCATCCAGCATTCGTATGCAGATTGACTCAAAACCAGAAGAACTCGACCGACTCGATCGTCGTATCATCCAGCTCAAACTGGAACAACAGGCGTTAATGAAAGAGTCTGATGAAGCCAGTAAAAAACGTCTGGATATGCTCAACGAAGAACTGAGCGACAAAGAACGTCAGTACTCCGAGTTAGAAGAAGAGTGGAAAGCAGAGAAGGCATCGCTTTCTGGTACGCAGACCATTAAAGCGGAACTGGAACAGGCGAAAATCGCTATTGAACAGGCTCGCCGTGTGGGGGACCTGGCGCGGATGTCTGAACTGCAATACGGCAAAATCCCGGAACTGGAAAAGCAACTGGAAGCCGCAACGCAGCTCGAAGGCAAAACTATGCGTCTGTTGCGTAATAAAGTGACCGACGCCGAAATTGCTGAAGTGCTGGCGCGTTGGACGGGGATTCCGGTTTCTCGCATGATGGAAAGCGAGCGCGAAAAACTGCTGCGTATGGAGCAAGAACTGCACCATCGCGTAATTGGTCAGAACGAAGCGGTTGATGCGGTATCTAACGCTATTCGTCGTAGCCGTGCGGGGCTGGCGGATCCAAATCGCCCGATTGGTTCATTCCTGTTCCTCGGCCCAACTGGTGTGGGGAAAACAGAGCTTTGTAAGGCGCTGGCGAACTTTATGTTTGATAGCGACGAGGCGATGGTCCGTATCGATATGTCCGAGTTTATGGAGAAACACTCGGTGTCTCGTTTGGTTGGTGCGCCTCCGGGATATGTCGGTTATGAAGAAGGTGGCTACCTGACCGAAGCGGTGCGTCGTCGTCCGTATTCCGTCATCCTGCTGGATGAAGTGGAAAAAGCGCATCCGGATGTCTTCAACATTCTGTTGCAGGTACTGGATGATGGGCGTCTGACTGACGGGCAAGGGAGAACGGTCGACTTCCGTAATACGGTCGTCATTATGACCTCTAACCTCGGTTCCGATCTGATTCAGGAACGCTTCGGTGAACTGGATTATGCGCACATGAAAGAGCTGGTGCTCGGTGTGGTAAGCCATAACTTCCGTCCGGAATTCATTAACCGTATCGATGAAGTGGTGGTCTTCCATCCGCTGGGTGAACAGCACATTGCCTCGATTGCGCAGATTCAGTTGAAACGTCTGTACAAACGTCTGGAAGAACGTGGTTATGAAATCCACATTTCTGACGAGGCGCTGAAACTGCTGAGCGAGAACGGTTACGATCCGGTCTATGGTGCACGTCCTCTGAAACGTGCAATTCAGCAGCAGATCGAAAACCCGCTGGCACAGCAAATACTGTCTGGTGAATTGGTTCCGGGTAAAGTGATTCGCCTGGAAGTTAATGAAGACCGGATTGTCGCCGTCCAGTAA", - "dna_sequence_length": 2574, - "functions": [ - "protein disaggregation chaperone" - ], - "id": "CDS_2572", - "location": [ - [ - "NC_000913", - 2734173, - "-", - 2574 - ] - ], - "md5": "29aec1e81264654487b3c87f05f8d6f6", - "parent_gene": "", - "protein_md5": "d6ef643f0804ab84ab4a77a7091bab22", - "protein_translation": "MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAVQ", - "protein_translation_length": 857, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2575" - ], - [ - "gene_synonym", - "yfiH" - ], - [ - "gene_synonym", - "GeneID:947089" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33644" - ], - [ - "gene_synonym", - "GI:16130514" - ], - [ - "gene_synonym", - "b2593" - ], - [ - "gene_synonym", - "ECK2591" - ], - [ - "gene_synonym", - "ASAP:ABE-0008530" - ], - [ - "gene_synonym", - "NP_417084.1" - ], - [ - "gene_synonym", - "EcoGene:EG12097" - ] - ], - "dna_sequence": "ATGAGTAAGCTGATTGTCCCGCAGTGGCCGCAGCCAAAAGGTGTTGCGGCCTGTAGCTCCACTCGTATCGGCGGCGTGAGCTTGCCCCCGTATGACTCACTCAACCTCGGTGCCCATTGTGGCGATAACCCGGATCACGTTGAGGAGAATCGCAAGCGACTTTTTGCTGCGGGCAATTTGCCTTCTAAACCGGTCTGGCTTGAGCAGGTACACGGCAAAGATGTGCTTAAGCTCACTGGCGAACCTTATGCCTCAAAACGGGCGGATGCCTCTTATAGCAATACGCCCGGCACGGTTTGCGCAGTGATGACTGCCGACTGCCTCCCTGTGCTGTTTTGCAATCGAGCGGGAACGGAAGTCGCCGCCGCTCATGCTGGCTGGCGTGGACTGTGCGCAGGCGTGCTGGAAGAGACGGTTTCCTGTTTTGCTGATAATCCGGAAAATATTCTCGCCTGGTTAGGGCCGGCAATTGGTCCACGCGCGTTCGAAGTGGGGGGGGAGGTTCGCGAGGCGTTTATGGCAGTAGACGCTAAAGCAAGTGCAGCTTTCATTCAGCATGGTGATAAGTATCTGGCGGATATTTATCAGCTTGCCCGGCAGCGTCTGGCGAACGTGGGTGTTGAGCAAATTTTCGGCGGCGACCGTTGTACATATACGGAAAATGAGACTTTCTTCTCTTATCGTCGCGACAAGACCACCGGTCGTATGGCAAGTTTCATTTGGCTGATATAA", - "dna_sequence_length": 732, - "functions": [ - "UPF0124 family protein" - ], - "id": "CDS_2573", - "location": [ - [ - "NC_000913", - 2735034, - "-", - 732 - ] - ], - "md5": "0723c4995db094ab024fd7c1610b5a07", - "parent_gene": "", - "protein_md5": "0964b88bae051b5140427145ee7ba2a6", - "protein_translation": "MSKLIVPQWPQPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNPDHVEENRKRLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNRAGTEVAAAHAGWRGLCAGVLEETVSCFADNPENILAWLGPAIGPRAFEVGGEVREAFMAVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTYTENETFFSYRRDKTTGRMASFIWLI", - "protein_translation_length": 243, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130515" - ], - [ - "gene_synonym", - "GeneID:947087" - ], - [ - "gene_synonym", - "JW2576" - ], - [ - "gene_synonym", - "yfiI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33643" - ], - [ - "gene_synonym", - "rluD" - ], - [ - "gene_synonym", - "EcoGene:EG12098" - ], - [ - "gene_synonym", - "ECK2592" - ], - [ - "gene_synonym", - "b2594" - ], - [ - "gene_synonym", - "sfhB" - ], - [ - "gene_synonym", - "ASAP:ABE-0008532" - ], - [ - "gene_synonym", - "NP_417085.1" - ] - ], - "dna_sequence": "ATGGCACAACGAGTACAGCTCACTGCAACGGTGTCCGAAAACCAACTCGGTCAACGCTTAGATCAGGCTTTGGCCGAAATGTTCCCGGATTATTCACGTTCGCGAATAAAAGAATGGATCCTCGACCAGCGAGTGCTGGTTAACGGCAAAGTTTGTGATAAGCCGAAAGAAAAAGTATTGGGTGGCGAGCAGGTTGCCATCAACGCTGAGATTGAAGAAGAAGCGCGTTTTGAACCGCAGGATATCCCGCTGGATATCGTCTATGAAGATGAAGACATTATTATCATTAATAAACCGCGCGACCTGGTGGTACATCCTGGCGCGGGTAACCCGGATGGCACGGTACTGAATGCGTTGCTTCATTACTATCCACCCATTGCCGATGTACCGCGTGCGGGCATCGTCCATCGTCTGGATAAAGACACCACTGGCCTGATGGTTGTGGCAAAAACCGTTCCGGCTCAGACGCGTTTAGTCGAATCTTTGCAACGGCGTGAAATTACTCGTGAGTATGAAGCGGTGGCGATTGGTCATATGACCGCAGGTGGCACGGTGGACGAGCCAATCAGTCGCCACCCGACCAAACGTACCCATATGGCGGTGCATCCGATGGGCAAACCAGCGGTGACTCACTATCGCATCATGGAACACTTCCGTGTGCACACGCGTCTGCGGTTGCGTCTGGAAACTGGACGTACGCACCAGATCCGCGTGCATATGGCCCATATCACTCATCCGCTGGTGGGCGATCCGGTTTATGGTGGCCGTCCGCGTCCGCCAAAAGGTGCTTCGGAAGCATTTATCTCCACGCTGCGTAAGTTTGACCGCCAGGCGCTACATGCAACCATGCTGCGTCTTTATCACCCGATCTCCGGCATCGAAATGGAATGGCATGCGCCTATTCCACAAGATATGGTGGAGCTGATTGAGGTGATGCGCGCCGATTTCGAAGAACATAAGGATGAAGTGGACTGGTTATGA", - "dna_sequence_length": 981, - "functions": [ - "23S rRNA pseudouridine(1911,1915,1917) synthase" - ], - "id": "CDS_2574", - "location": [ - [ - "NC_000913", - 2736011, - "-", - 981 - ] - ], - "md5": "b6ce6e39644f27e8ee05f96358682c95", - "parent_gene": "", - "protein_md5": "007e91ed8c72886d7f9fd02da8969de7", - "protein_translation": "MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVLGGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKDEVDWL", - "protein_translation_length": 326, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfiO" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC02" - ], - [ - "gene_synonym", - "ecfD" - ], - [ - "gene_synonym", - "JW2577" - ], - [ - "gene_synonym", - "GeneID:947086" - ], - [ - "gene_synonym", - "bamD" - ], - [ - "gene_synonym", - "NP_417086.1" - ], - [ - "gene_synonym", - "GI:16130516" - ], - [ - "gene_synonym", - "EcoGene:EG14222" - ], - [ - "gene_synonym", - "b2595" - ], - [ - "gene_synonym", - "ECK2593" - ], - [ - "gene_synonym", - "ASAP:ABE-0008536" - ] - ], - "dna_sequence": "ATGACGCGCATGAAATATCTGGTGGCAGCCGCCACACTAAGCCTGTTTTTGGCGGGTTGCTCGGGGTCAAAGGAAGAAGTACCTGATAATCCGCCAAATGAAATTTACGCGACTGCACAACAAAAGCTGCAGGACGGTAACTGGAGACAGGCAATAACGCAACTGGAAGCGTTAGATAATCGCTATCCGTTTGGTCCGTATTCGCAGCAGGTGCAGCTGGATCTCATCTACGCCTACTATAAAAACGCCGATTTGCCGTTAGCACAGGCTGCCATCGATCGTTTTATTCGCCTTAACCCGACCCATCCGAATATCGATTATGTCATGTACATGCGTGGCCTGACCAATATGGCGCTGGATGACAGTGCGCTGCAAGGGTTCTTTGGCGTCGATCGTAGCGATCGCGATCCTCAACATGCACGAGCTGCGTTTAGTGACTTTTCCAAACTGGTGCGCGGCTATCCGAACAGTCAGTACACCACCGATGCCACCAAACGTCTGGTATTCCTGAAAGATCGTCTGGCGAAATATGAATACTCCGTGGCCGAGTACTATACAGAACGTGGCGCATGGGTTGCCGTCGTTAACCGCGTAGAAGGCATGTTGCGCGACTACCCGGATACCCAGGCTACGCGTGATGCGCTGCCGCTGATGGAAAATGCATACCGTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCAAACAGCAGCAATACATAA", - "dna_sequence_length": 738, - "functions": [ - "BamABCDE complex OM biogenesis lipoprotein" - ], - "id": "CDS_2575", - "location": [ - [ - "NC_000913", - 2736146, - "+", - 738 - ] - ], - "md5": "70db8a3e09791552576ff328ece358d3", - "parent_gene": "", - "protein_md5": "471cb7c8f5b737badaa0c459d8e92d62", - "protein_translation": "MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNT", - "protein_translation_length": 245, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "raiA" - ], - [ - "gene_synonym", - "GeneID:947129" - ], - [ - "gene_synonym", - "NP_417088.1" - ], - [ - "gene_synonym", - "GI:16130518" - ], - [ - "gene_synonym", - "JW2578" - ], - [ - "gene_synonym", - "ASAP:ABE-0008540" - ], - [ - "gene_synonym", - "yfiA" - ], - [ - "gene_synonym", - "ECK2594" - ], - [ - "gene_synonym", - "b2597" - ], - [ - "gene_synonym", - "EcoGene:EG11151" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD49" - ] - ], - "dna_sequence": "ATGACAATGAACATTACCAGCAAACAAATGGAAATTACTCCGGCCATCCGCCAACATGTCGCAGACCGTCTCGCCAAACTGGAAAAATGGCAAACACATCTGATTAATCCACATATCATTCTGTCCAAAGAGCCACAAGGGTTTGTTGCTGACGCCACAATCAATACACCTAACGGCGTTCTGGTTGCCAGTGGTAAACATGAAGATATGTACACCGCAATTAACGAATTGATCAACAAGCTGGAACGGCAGCTCAATAAACTGCAGCACAAAGGCGAAGCACGTCGTGCCGCAACATCGGTGAAAGACGCCAACTTCGTCGAAGAAGTTGAAGAAGAGTAG", - "dna_sequence_length": 342, - "functions": [ - "cold shock protein associated with 30S ribosomal subunit" - ], - "id": "CDS_2576", - "location": [ - [ - "NC_000913", - 2737154, - "+", - 342 - ] - ], - "md5": "d173bbfe31d8f85887b701d44a6438a6", - "parent_gene": "", - "protein_md5": "56a38ea72f0be578bfef7f17b93bd275", - "protein_translation": "MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKEPQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAATSVKDANFVEEVEEE", - "protein_translation_length": 113, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947080" - ], - [ - "gene_synonym", - "GI:16130519" - ], - [ - "gene_synonym", - "JW2579" - ], - [ - "gene_synonym", - "ASAP:ABE-0008543" - ], - [ - "gene_synonym", - "pheL" - ], - [ - "gene_synonym", - "ECK2595" - ], - [ - "gene_synonym", - "pheAE" - ], - [ - "gene_synonym", - "EcoGene:EG11271" - ], - [ - "gene_synonym", - "NP_417089.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD72" - ], - [ - "gene_synonym", - "b2598" - ] - ], - "dna_sequence": "ATGAAACACATACCGTTTTTCTTCGCATTCTTTTTTACCTTCCCCTGA", - "dna_sequence_length": 48, - "functions": [ - "pheA gene leader peptide" - ], - "id": "CDS_2577", - "location": [ - [ - "NC_000913", - 2737599, - "+", - 48 - ] - ], - "md5": "4cf0bd38b07546735b0b800bc615335c", - "parent_gene": "", - "protein_md5": "2efe0b4ae72e2aff55aa6f5f81f4505d", - "protein_translation": "MKHIPFFFAFFFTFP", - "protein_translation_length": 15, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2580" - ], - [ - "gene_synonym", - "GeneID:947081" - ], - [ - "gene_synonym", - "pheA" - ], - [ - "gene_synonym", - "NP_417090.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008545" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9J8" - ], - [ - "gene_synonym", - "EcoGene:EG10707" - ], - [ - "gene_synonym", - "ECK2596" - ], - [ - "gene_synonym", - "GI:16130520" - ], - [ - "gene_synonym", - "b2599" - ] - ], - "dna_sequence": "ATGACATCGGAAAACCCGTTACTGGCGCTGCGAGAGAAAATCAGCGCGCTGGATGAAAAATTATTAGCGTTACTGGCAGAACGGCGCGAACTGGCCGTCGAGGTGGGAAAAGCCAAACTGCTCTCGCATCGCCCGGTACGTGATATTGATCGTGAACGCGATTTGCTGGAAAGATTAATTACGCTCGGTAAAGCGCACCATCTGGACGCCCATTACATTACTCGCCTGTTCCAGCTCATCATTGAAGATTCCGTATTAACTCAGCAGGCTTTGCTCCAACAACATCTCAATAAAATTAATCCGCACTCAGCACGCATCGCTTTTCTCGGCCCCAAAGGTTCTTATTCCCATCTTGCGGCGCGCCAGTATGCTGCCCGTCACTTTGAGCAATTCATTGAAAGTGGCTGCGCCAAATTTGCCGATATTTTTAATCAGGTGGAAACCGGCCAGGCCGACTATGCCGTCGTACCGATTGAAAATACCAGCTCCGGTGCCATAAACGACGTTTACGATCTGCTGCAACATACCAGCTTGTCGATTGTTGGCGAGATGACGTTAACTATCGACCATTGTTTGTTGGTCTCCGGCACTACTGATTTATCCACCATCAATACGGTCTACAGCCATCCGCAGCCATTCCAGCAATGCAGCAAATTCCTTAATCGTTATCCGCACTGGAAGATTGAATATACCGAAAGTACGTCTGCGGCAATGGAAAAGGTTGCACAGGCAAAATCACCGCATGTTGCTGCGTTGGGAAGCGAAGCTGGCGGCACTTTGTACGGTTTGCAGGTACTGGAGCGTATTGAAGCAAATCAGCGACAAAACTTCACCCGATTTGTGGTGTTGGCGCGTAAAGCCATTAACGTGTCTGATCAGGTTCCGGCGAAAACCACGTTGTTAATGGCGACCGGGCAACAAGCCGGTGCGCTGGTTGAAGCGTTGCTGGTACTGCGCAACCACAATCTGATTATGACCCGTCTGGAATCACGCCCGATTCACGGTAATCCATGGGAAGAGATGTTCTATCTGGATATTCAGGCCAATCTTGAATCAGCGGAAATGCAAAAAGCATTGAAAGAGTTAGGGGAAATCACCCGTTCAATGAAGGTATTGGGCTGTTACCCAAGTGAGAACGTAGTGCCTGTTGATCCAACCTGA", - "dna_sequence_length": 1161, - "functions": [ - "chorismate mutase and prephenate dehydratase, P-protein" - ], - "id": "CDS_2578", - "location": [ - [ - "NC_000913", - 2737745, - "+", - 1161 - ] - ], - "md5": "4dbce2774896eb16a5919af7cee5dbbf", - "parent_gene": "", - "protein_md5": "d3e39be20748e172df99818375e5108c", - "protein_translation": "MTSENPLLALREKISALDEKLLALLAERRELAVEVGKAKLLSHRPVRDIDRERDLLERLITLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNKINPHSARIAFLGPKGSYSHLAARQYAARHFEQFIESGCAKFADIFNQVETGQADYAVVPIENTSSGAINDVYDLLQHTSLSIVGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSKFLNRYPHWKIEYTESTSAAMEKVAQAKSPHVAALGSEAGGTLYGLQVLERIEANQRQNFTRFVVLARKAINVSDQVPAKTTLLMATGQQAGALVEALLVLRNHNLIMTRLESRPIHGNPWEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSENVVPVDPT", - "protein_translation_length": 386, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2581" - ], - [ - "gene_synonym", - "GeneID:947115" - ], - [ - "gene_synonym", - "NP_417091.1" - ], - [ - "gene_synonym", - "EcoGene:EG11039" - ], - [ - "gene_synonym", - "ASAP:ABE-0008547" - ], - [ - "gene_synonym", - "tyrA" - ], - [ - "gene_synonym", - "ECK2597" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07023" - ], - [ - "gene_synonym", - "GI:16130521" - ], - [ - "gene_synonym", - "b2600" - ] - ], - "dna_sequence": "ATGGTTGCTGAATTGACCGCATTACGCGATCAAATTGATGAAGTCGATAAAGCGCTGCTGAATTTATTAGCGAAGCGTCTGGAACTGGTTGCTGAAGTGGGCGAGGTGAAAAGCCGCTTTGGACTGCCTATTTATGTTCCGGAGCGCGAGGCATCTATGTTGGCCTCGCGTCGTGCAGAGGCGGAAGCTCTGGGTGTACCGCCAGATCTGATTGAGGATGTTTTGCGTCGGGTGATGCGTGAATCTTACTCCAGTGAAAACGACAAAGGATTTAAAACACTTTGTCCGTCACTGCGTCCGGTGGTTATCGTCGGCGGTGGCGGTCAGATGGGACGCCTGTTCGAGAAGATGCTGACCCTCTCGGGTTATCAGGTGCGGATTCTGGAGCAACATGACTGGGATCGAGCGGCTGATATTGTTGCCGATGCCGGAATGGTGATTGTTAGTGTGCCAATCCACGTTACTGAGCAAGTTATTGGCAAATTACCGCCTTTACCGAAAGATTGTATTCTGGTCGATCTGGCATCAGTGAAAAATGGGCCATTACAGGCCATGCTGGTGGCGCATGATGGTCCGGTGCTGGGGCTACACCCGATGTTCGGTCCGGACAGCGGTAGCCTGGCAAAGCAAGTTGTGGTCTGGTGTGATGGACGTAAACCGGAAGCATACCAATGGTTTCTGGAGCAAATTCAGGTCTGGGGCGCTCGGCTGCATCGTATTAGCGCCGTCGAGCACGATCAGAATATGGCGTTTATTCAGGCACTGCGCCACTTTGCTACTTTTGCTTACGGGCTGCACCTGGCAGAAGAAAATGTTCAGCTTGAGCAACTTCTGGCGCTCTCTTCGCCGATTTACCGCCTTGAGCTGGCGATGGTCGGGCGACTGTTTGCTCAGGATCCGCAGCTTTATGCCGACATCATTATGTCGTCAGAGCGTAATCTGGCGTTAATCAAACGTTACTATAAGCGTTTCGGCGAGGCGATTGAGTTGCTGGAGCAGGGCGATAAGCAGGCGTTTATTGACAGTTTCCGCAAGGTGGAGCACTGGTTCGGCGATTACGCACAGCGTTTTCAGAGTGAAAGCCGCGTGTTATTGCGTCAGGCGAATGACAATCGCCAGTAA", - "dna_sequence_length": 1122, - "functions": [ - "fused chorismate mutase T/prephenate dehydrogenase" - ], - "id": "CDS_2579", - "location": [ - [ - "NC_000913", - 2740069, - "-", - 1122 - ] - ], - "md5": "18ee1efa9b6e44e3a8acf4d0f23c6f63", - "parent_gene": "", - "protein_md5": "6cd6d53860acfb56bf017bb8bc68fc51", - "protein_translation": "MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGEVKSRFGLPIYVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVVIVGGGGQMGRLFEKMLTLSGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIGKLPPLPKDCILVDLASVKNGPLQAMLVAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGRKPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQLLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSERNLALIKRYYKRFGEAIELLEQGDKQAFIDSFRKVEHWFGDYAQRFQSESRVLLRQANDNRQ", - "protein_translation_length": 373, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2582" - ], - [ - "gene_synonym", - "ASAP:ABE-0008549" - ], - [ - "gene_synonym", - "GeneID:947084" - ], - [ - "gene_synonym", - "EcoGene:EG10078" - ], - [ - "gene_synonym", - "NP_417092.1" - ], - [ - "gene_synonym", - "GI:16130522" - ], - [ - "gene_synonym", - "aroF" - ], - [ - "gene_synonym", - "ECK2598" - ], - [ - "gene_synonym", - "b2601" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00888" - ] - ], - "dna_sequence": "ATGCAAAAAGACGCGCTGAATAACGTACATATTACCGACGAACAGGTTTTAATGACTCCGGAACAACTGAAGGCCGCTTTTCCATTGAGCCTGCAACAAGAAGCCCAGATTGCTGACTCGCGTAAAAGCATTTCAGATATTATCGCCGGGCGCGATCCTCGTCTGCTGGTAGTATGTGGTCCTTGTTCCATTCATGATCCGGAAACTGCTCTGGAATATGCTCGTCGATTTAAAGCCCTTGCCGCAGAGGTCAGCGATAGCCTCTATCTGGTAATGCGCGTCTATTTTGAAAAACCCCGTACCACTGTCGGCTGGAAAGGGTTAATTAACGATCCCCATATGGATGGCTCTTTTGATGTAGAAGCCGGGCTGCAGATCGCGCGTAAATTGCTGCTTGAGCTGGTGAATATGGGACTGCCACTGGCGACGGAAGCGTTAGATCCGAATAGCCCGCAATACCTGGGCGATCTGTTTAGCTGGTCAGCAATTGGTGCTCGTACAACGGAATCGCAAACTCACCGTGAAATGGCCTCCGGGCTTTCCATGCCGGTTGGTTTTAAAAACGGCACCGACGGCAGTCTGGCAACAGCAATTAACGCTATGCGCGCCGCCGCCCAGCCGCACCGTTTTGTTGGCATTAACCAGGCAGGGCAGGTTGCGTTGCTACAAACTCAGGGGAATCCGGACGGCCATGTGATCCTGCGCGGTGGTAAAGCGCCGAACTATAGCCCTGCGGATGTTGCGCAATGTGAAAAAGAGATGGAACAGGCGGGACTGCGCCCGTCTCTGATGGTAGATTGCAGCCACGGTAATTCCAATAAAGATTATCGCCGTCAGCCTGCGGTGGCAGAATCCGTGGTTGCTCAAATCAAAGATGGCAATCGCTCAATTATTGGTCTGATGATCGAAAGTAATATCCACGAGGGCAATCAGTCTTCCGAGCAACCGCGCAGTGAAATGAAATACGGTGTATCCGTAACCGATGCCTGCATTAGCTGGGAAATGACCGATGCCTTGCTGCGTGAAATTCATCAGGATCTGAACGGGCAGCTGACGGCTCGCGTGGCTTAA", 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- "ECK2599" - ], - [ - "gene_synonym", - "NP_417093.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11289" - ], - [ - "gene_synonym", - "JW5412" - ], - [ - "gene_synonym", - "GI:90111465" - ], - [ - "gene_synonym", - "b2602" - ] - ], - "dna_sequence": "ATGATGAAAAAGTTTATCGCCCCCTTGTTGGCTTTACTGGTTAGCGGATGTCAGATTGATCCTTATACTCACGCGCCAACCTTGACCAGCACCGACTGGTATGATGTCGGTATGGAAGATGCGATATCGGGCAGCGCCATAAAAGATGACGATGCATTTAGCGATTCACAGGCGGATCGCGGTCTATACCTTAAAGGATATGCCGAAGGACAAAAGAAAACTTGCCAGACCGATTTTACTTATGCCCGAGGACTTTCCGGTAAAAGCTTTCCTGCCAGCTGCAACAATGTTGAAAATGCCAGCCAACTGCATGAAGTATGGCAAAAAGGGGCTGATGAAAATGCCAGCACAATACGATTAAATTAA", - "dna_sequence_length": 366, - "functions": [ - "lipoprotein" - ], - "id": "CDS_2581", - "location": [ - [ - "NC_000913", - 2741360, - "+", - 366 - ] - ], - "md5": "c432e692a3cf1b15aa3f3d8e02cf3d5d", - "parent_gene": "", - "protein_md5": "1c1cb437efd7b028aed534728d4005d3", - "protein_translation": "MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADRGLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVENASQLHEVWQKGADENASTIRLN", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947090" - ], - [ - "gene_synonym", - "JW2584" - ], - [ - "gene_synonym", - "yfiR" - ], - [ - "gene_synonym", - "ASAP:ABE-0008568" - ], - [ - "gene_synonym", - "GI:16130524" - ], - [ - "gene_synonym", - "EcoGene:EG14225" - ], - [ - "gene_synonym", - "ECK2600" - ], - [ - "gene_synonym", - "NP_417094.1" - ], - [ - "gene_synonym", - "b2603" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64548" - ] - ], - "dna_sequence": "ATGCGTTTTTCTCACCGACTGTTCTTACTTCTGATTCTCCTGCTGACGGGAGCACCAATACTCGCTCAGGAGCCTTCTGACGTTGCGAAAAACGTGCGTATGATGGTTTCCGGTATTGTCAGTTACACCCGCTGGCCTGCGCTATCAGGGCCACCAAAGTTATGTATCTTTTCATCTTCACGTTTTAGTACCGCCCTACAAGAGAATGCCGCGACATCTTTGCCTTATCTGCCTGTCATCATTCACACTCAACAAGAGGCGATGATTTCAGGCTGCAATGGTTTTTATTTTGGCAACGAGTCACCGACATTCCAGATGGAATTAACCGAACAATATCCGTCAAAGGCGTTATTATTAATTGCCGAACAAAATACCGAGTGCATTATTGGTAGCGCCTTTTGTCTGATCATCCACAATAATGACGTCAGATTTGCCGTAAACCTGGATGCCTTATCGCGTAGCGGTGTAAAGGTCAACCCGGATGTCTTAATGCTCGCACGGAAGAAAAATGATGGATAA", - "dna_sequence_length": 519, - "functions": [ - "putative periplasmic inhibitor of YfiN activity" - ], - "id": "CDS_2582", - "location": [ - [ - "NC_000913", - 2741875, - "+", - 519 - ] - ], - "md5": "cd2c089505ca3ff2abf75dfacfcb702c", - "parent_gene": "", - "protein_md5": "0f1a1505a92b1343234682838ca09b1f", - "protein_translation": "MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTRWPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESPTFQMELTEQYPSKALLLIAEQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNPDVLMLARKKNDG", - "protein_translation_length": 172, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yfiN" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46139" - ], - [ - "gene_synonym", - "GeneID:947091" - ], - [ - "gene_synonym", - "ASAP:ABE-0008570" - ], - [ - "gene_synonym", - "ECK2601" - ], - [ - "gene_synonym", - "NP_417095.1" - ], - [ - "gene_synonym", - "EcoGene:EG12880" - ], - [ - "gene_synonym", - "GI:16130525" - ], - [ - "gene_synonym", - "b2604" - ], - [ - "gene_synonym", - "JW2585" - ] - ], - "dna_sequence": "ATGATGGATAACGATAATTCTCTTAATAAGCGCCCCACGTTTAAAAGAGCATTACGCAACATCAGTATGACCAGCATATTTATCACTATGATGCTGATCTGGTTGCTGCTTTCCGTGACCTCGGTGCTGACCCTGAAACAGTACGCGCAAAAAAACCTGGCACTGACAGCAGCAACAATGACTTACAGTCTGGAAGCAGCTGTCGTTTTTGCCGATGGCCCTGCAGCAACTGAAACACTGGCAGCGCTGGGCCAGCAAGGGCAATTTTCAACTGCAGAAGTACGTGATAAGCAGCAAAATATTCTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCATTTGCACAATGGCCTGGTAGAAGCGCTGAAAAATATCACCGATGTCGTACATGATGTGCGTTCCAACCGCAATTTTTCCCGACGAGTTTCGGAAGAACGTATCGCTGAGTTTCACCGCTTCGCTCTCGACTTCAACAGTCTGCTGGATGAAATGGAAGAGTGGCAGCTTCGTTTACAGGCTAAAAATGCGCAGCTTCTACGTACCGCGCTACATGACCCATTAACCGGGCTGGCTAACCGCGCAGCGTTTCGTAGCGGCATCAACACGTTGATGAACAATTCCGATGCCCGAAAAACGTCGGCGTTACTATTTCTTGATGGCGATAATTTCAAATACATCAATGATACCTGGGGTCATGCGACGGGCGATAGAGTCTTGATTGAAATCGCAAAACGGTTAGCTGAATTTGGCGGGCTGCGACATAAAGCATACCGCCTGGGCGGCGATGAATTCGCTATGGTGCTCTATGATGTACAGTCGGAATCTGAAGTGCAGCAGATATGTTCAGCACTGACACAAATCTTTAATCTCCCGTTTGATCTTCATAATGGCCATCAGACCACCATGACATTAAGCATTGGTTACGCGATGACCATTGAGCACGCCTCTGCGGAAAAATTACAAGAGCTTGCCGATCACAATATGTATCAGGCCAAACACCAGCGTGCCGAAAAGCTGGTGAGATAA", 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- "gene_synonym", - "NP_417096.1" - ], - [ - "gene_synonym", - "yfiB" - ], - [ - "gene_synonym", - "GI:16130526" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07021" - ], - [ - "gene_synonym", - "b2605" - ], - [ - "gene_synonym", - "EcoGene:EG11152" - ] - ], - "dna_sequence": "ATGATAAAGCACCTGGTAGCACCCCTGGTTTTCACCTCACTAATACTGACTGGCTGCCAGTCCCCTCAGGGAAAGTTTACTCCTGAGCAAGTCGCCGCTATGCAATCTTATGGATTTACTGAATCCGCCGGCGACTGGTCGCTGGGCTTATCAGATGCCATTCTGTTCGCAAAAAATGACTACAAATTGCTCCCGGAAAGCCAGCAACAGATCCAAACCATGGCAGCTAAATTGGCCTCGACAGGGCTAACACATGCCCGTATGGATGGACACACCGATAACTATGGTGAAGACAGTTACAACGAAGGCTTATCATTGAAACGGGCGAATGTCGTGGCCGATGCATGGGCTATGGGTGGACAAATTCCACGCAGCAATCTCACCACACAGGGTTTAGGAAAAAAATATCCCATAGCCAGTAACAAGACCGCCCAGGGCCGCGCCGAGAACCGCCGCGTCGCAGTGGTGATTACTACCCCTTAA", - "dna_sequence_length": 483, - "functions": [ - "OM lipoprotein putative positive effector of YfiN activity" - ], - "id": "CDS_2584", - "location": [ - [ - "NC_000913", - 2743625, - "+", - 483 - ] - ], - "md5": "7c5e2196272831d7509dc552292fb34c", - "parent_gene": "", - "protein_md5": "01810fdaf7e82a4eab1431799e66d066", - "protein_translation": "MIKHLVAPLVFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP", - "protein_translation_length": 160, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008574" - ], - [ - "gene_synonym", - "GeneID:947096" - ], - [ - "gene_synonym", - "JW2587" - ], - [ - "gene_synonym", - "EcoGene:EG10880" - ], - [ - "gene_synonym", - "ECK2603" - ], - [ - "gene_synonym", - "rplS" - ], - [ - "gene_synonym", - "GI:16130527" - ], - [ - "gene_synonym", - "NP_417097.1" - ], - [ - "gene_synonym", - "b2606" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7K6" - ] - ], - "dna_sequence": "ATGAGCAACATTATTAAGCAACTTGAACAAGAGCAGATGAAGCAGGACGTACCTTCCTTCCGTCCGGGTGATACCGTGGAAGTGAAAGTATGGGTTGTTGAAGGTTCCAAAAAACGTCTGCAGGCATTCGAGGGCGTGGTTATCGCTATTCGTAACCGCGGTCTGCACTCTGCATTCACTGTTCGTAAAATTTCCAACGGCGAAGGCGTTGAGCGTGTCTTCCAGACTCACTCTCCGGTAGTTGACAGCATTTCTGTCAAACGTCGTGGTGCTGTTCGTAAAGCTAAACTGTACTACCTGCGTGAGCGTACTGGTAAGGCTGCTCGTATCAAAGAGCGTCTTAACTAA", - "dna_sequence_length": 348, - "functions": [ - "50S ribosomal subunit protein L19" - ], - "id": "CDS_2585", - "location": [ - [ - "NC_000913", - 2744530, - "-", - 348 - ] - ], - "md5": "a2f4530b10b80d4ef706ae269f8fc56a", - "parent_gene": "", - "protein_md5": "f5a64710e99eaf586d30566f0129af5e", - "protein_translation": "MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN", - "protein_translation_length": 115, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2604" - ], - [ - "gene_synonym", - "ASAP:ABE-0008576" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A873" - ], - [ - "gene_synonym", - "JW2588" - ], - [ - "gene_synonym", - "GeneID:947099" - ], - [ - "gene_synonym", - "EcoGene:EG11023" - ], - [ - "gene_synonym", - "trmD" - ], - [ - "gene_synonym", - "b2607" - ], - [ - "gene_synonym", - "NP_417098.1" - ], - [ - "gene_synonym", - "GI:16130528" - ] - ], - "dna_sequence": "ATGTGGATTGGCATAATTAGCCTGTTTCCTGAAATGTTCCGCGCAATTACCGATTACGGGGTAACTGGCCGGGCAGTTAAAAATGGCCTGCTGAGCATCCAGAGCTGGAGTCCTCGCGACTTCACGCATGACCGGCACCGTACCGTGGACGATCGTCCTTACGGCGGCGGACCGGGGATGTTAATGATGGTGCAACCCTTGCGGGACGCCATTCATGCAGCAAAAGCCGCGGCGGGTGAAGGCGCAAAGGTGATTTATCTGTCACCACAGGGACGCAAGCTTGATCAAGCGGGCGTCAGCGAACTGGCAACGAATCAAAAATTGATTCTGGTGTGCGGTCGCTACGAAGGTATAGATGAGCGCGTGATCCAAACCGAAATTGACGAAGAATGGTCAATCGGCGATTACGTTCTCAGTGGTGGTGAGTTACCAGCAATGACGCTGATTGACTCCGTTTCCCGGTTTATTCCGGGAGTACTGGGACATGAAGCCTCGGCAACGGAAGATTCCTTTGCTGAAGGATTGCTGGATTGCCCGCACTATACGCGGCCTGAGGTGTTAGAAGGGATGGAAGTTCCGCCAGTGTTACTGTCGGGCAACCATGCCGAGATACGTCGCTGGCGTTTGAAACAGTCGCTGGGCCGTACCTGGCTTAGAAGACCTGAACTTCTGGAAAACCTGGCTCTGACTGAAGAGCAAGCAAGGTTGCTGGCGGAGTTCAAAACGGAACACGCACAACAGCAACATAAACATGATGGGATGGCGTAA", - "dna_sequence_length": 768, - "functions": [ - "tRNA m(1)G37 methyltransferase, SAM-dependent" - ], - "id": "CDS_2586", - "location": [ - [ - "NC_000913", - 2745339, - "-", - 768 - ] - ], - "md5": "2e880d24601264845877c3a0b5ea002e", - "parent_gene": "", - "protein_md5": "2ada1d8c9a5eb60c0809f05c5353ff39", - "protein_translation": "MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLGHEASATEDSFAEGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA", - "protein_translation_length": 255, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2605" - ], - [ - "gene_synonym", - "yfjA" - ], - [ - "gene_synonym", - "GeneID:947101" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7X6" - ], - [ - "gene_synonym", - "ASAP:ABE-0008579" - ], - [ - "gene_synonym", - "JW5413" - ], - [ - "gene_synonym", - "b2608" - ], - [ - "gene_synonym", - "rimM" - ], - [ - "gene_synonym", - "EcoGene:EG11153" - ], - [ - "gene_synonym", - "NP_417099.4" - ], - [ - "gene_synonym", - "GI:90111466" - ] - ], - "dna_sequence": "ATGAGCAAACAACTCACCGCGCAAGCACCTGTTGATCCCATCGTTTTGGGAAAAATGGGTTCGTCTTACGGTATTCGTGGGTGGCTCAGAGTGTTTTCTTCCACCGAAGACGCCGAAAGCATTTTTGACTATCAGCCCTGGTTTATCCAGAAGGCGGGTCAGTGGCAGCAAGTCCAGCTGGAAAGCTGGAAGCACCACAATCAGGACATGATCATCAAGCTGAAAGGCGTTGACGATCGTGATGCGGCGAACCTGCTGACGAATTGTGAAATTGTCGTGGATTCATCGCAGCTGCCTCAGCTTGAAGAGGGGGACTACTACTGGAAAGACCTGATGGGCTGCCAGGTAGTAACCACTGAAGGCTACGATCTCGGTAAAGTCGTCGATATGATGGAAACCGGATCTAATGACGTTCTCGTCATTAAGGCAAACCTGAAAGATGCGTTTGGTATCAAGGAACGTCTCGTACCGTTCCTCGATGGGCAGGTTATCAAGAAAGTCGATCTCACTACTCGTTCAATCGAAGTAGATTGGGATCCTGGTTTTTAA", - "dna_sequence_length": 549, - "functions": [ - "ribosome maturation factor" - ], - "id": "CDS_2587", - "location": [ - [ - "NC_000913", - 2745918, - "-", - 549 - ] - ], - "md5": "7864ddfd76f6e9051114171e76465014", - "parent_gene": "", - "protein_md5": "c07d27980fe1955e3a121e88359a12bc", - "protein_translation": "MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLEEGDYYWKDLMGCQVVTTEGYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLTTRSIEVDWDPGF", - "protein_translation_length": 182, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2606" - ], - [ - "gene_synonym", - "EcoGene:EG10915" - ], - [ - "gene_synonym", - "ASAP:ABE-0008583" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7T3" - ], - [ - "gene_synonym", - "JW2590" - ], - [ - "gene_synonym", - "NP_417100.1" - ], - [ - "gene_synonym", - "GeneID:947103" - ], - [ - "gene_synonym", - "GI:16130530" - ], - [ - "gene_synonym", - "b2609" - ], - [ - "gene_synonym", - "rpsP" - ] - ], - "dna_sequence": "ATGGTAACTATTCGTTTAGCACGTCACGGCGCTAAAAAGCGTCCGTTCTACCAGGTTGTTGTCGCTGACAGCCGTAATGCACGCAACGGTCGCTTCATCGAGCGCGTTGGTTTCTTCAACCCAATCGCTAGCGAAAAAGAAGAAGGCACTCGCCTGGATCTGGATCGCATCGCTCACTGGGTTGGCCAGGGCGCAACTATTTCTGATCGCGTTGCTGCGCTGATCAAAGAAGTAAACAAAGCAGCTTAA", - "dna_sequence_length": 249, - "functions": [ - "30S ribosomal subunit protein S16" - ], - "id": "CDS_2588", - "location": [ - [ - "NC_000913", - 2746185, - "-", - 249 - ] - ], - "md5": "8214cf3afe393fc23141af755a5a43ca", - "parent_gene": "", - "protein_md5": "1b64f96e17b3232b18d4f8cfe5373512", - "protein_translation": "MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIASEKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA", - "protein_translation_length": 82, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947102" - ], - [ - "gene_synonym", - "ECK2607" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGD7" - ], - [ - "gene_synonym", - "ASAP:ABE-0008586" - ], - [ - "gene_synonym", - "EcoGene:EG10300" - ], - [ - "gene_synonym", - "JW5414" - ], - [ - "gene_synonym", - "GI:16130531" - ], - [ - "gene_synonym", - "ffh" - ], - [ - "gene_synonym", - "b2610" - ], - [ - "gene_synonym", - "NP_417101.1" - ] - ], - "dna_sequence": "ATGTTTGATAATTTAACCGATCGTTTGTCGCGCACGCTGCGCAATATCAGTGGCCGTGGACGCCTCACTGAAGACAACGTAAAAGATACGCTGCGCGAAGTGCGCATGGCGCTGCTGGAGGCGGACGTAGCTCTGCCGGTAGTGCGTGAGTTTATCAATCGCGTAAAAGAGAAAGCGGTTGGTCATGAAGTTAATAAGAGCCTGACGCCGGGGCAGGAGTTCGTCAAAATAGTCCGTAACGAACTGGTTGCGGCGATGGGCGAAGAGAACCAGACCCTGAACCTGGCTGCGCAACCGCCTGCGGTCGTACTGATGGCGGGCCTGCAAGGTGCCGGTAAAACAACCAGCGTTGGTAAACTCGGTAAGTTCCTGCGCGAGAAGCACAAGAAGAAAGTGCTGGTGGTTTCTGCCGACGTTTATCGCCCGGCGGCAATCAAACAGCTTGAGACGCTGGCAGAGCAGGTGGGCGTTGATTTCTTCCCTTCTGATGTTGGTCAGAAGCCGGTAGATATCGTTAACGCGGCGCTGAAAGAAGCCAAACTGAAATTCTACGACGTGCTGCTGGTGGATACCGCTGGTCGTCTGCACGTTGACGAAGCGATGATGGACGAGATCAAACAAGTCCATGCGTCGATTAACCCGGTTGAAACCCTGTTTGTGGTTGACGCCATGACCGGTCAGGATGCGGCCAATACGGCAAAAGCATTCAATGAAGCGTTACCGCTTACCGGCGTAGTGTTGACCAAAGTGGACGGCGATGCCCGCGGCGGTGCGGCGCTCTCTATTCGTCACATCACTGGCAAACCGATCAAGTTCCTCGGTGTTGGCGAGAAAACTGAGGCGCTGGAGCCGTTCCATCCGGACCGCATCGCGTCGCGTATTCTCGGCATGGGCGACGTACTGTCGCTGATCGAAGATATCGAAAGCAAAGTTGACCGCGCGCAGGCAGAGAAATTAGCCAGCAAGCTGAAAAAAGGTGACGGCTTCGATCTCAACGACTTTCTTGAGCAGCTGCGCCAGATGAAAAATATGGGCGGCATGGCTAGTCTGATGGGCAAGCTGCCGGGCATGGGGCAGATCCCGGATAACGTCAAGTCACAGATGGACGATAAAGTGCTGGTGCGTATGGAAGCCATCATCAACTCGATGACGATGAAAGAGCGCGCTAAGCCAGAAATCATCAAAGGTTCGCGTAAACGCCGTATTGCTGCCGGTTGCGGTATGCAGGTGCAGGACGTTAACCGTCTTCTGAAACAGTTCGACGACATGCAGCGCATGATGAAGAAAATGAAGAAGGGCGGAATGGCGAAGATGATGAGAAGCATGAAGGGTATGATGCCCCCAGGCTTCCCTGGTCGCTAA", 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"GeneID:947098" - ], - [ - "gene_synonym", - "ASAP:ABE-0008591" - ], - [ - "gene_synonym", - "ECK2608" - ], - [ - "gene_synonym", - "JW2592" - ], - [ - "gene_synonym", - "GI:145698303" - ], - [ - "gene_synonym", - "ypjD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64432" - ], - [ - "gene_synonym", - "b2611" - ], - [ - "gene_synonym", - "EcoGene:EG14226" - ] - ], - "dna_sequence": "ATGCCCGTTTTTGCTCTGCTCGCGCTTGTCGCCTACTCCGTCAGTCTTGCGCTGATTGTTCCCGGTCTGCTGCAAAAAAACGGCGGCTGGCGGCGCATGGCTATTATTTCTGCGGTCATTGCGCTGGTCTGCCACGCAATCGCTCTGGAAGCCCGCATCCTGCCCGACGGTGATAGCGGACAAAACCTCAGCCTGCTGAACGTTGGTTCATTGGTCAGTTTGATGATCTGTACGGTAATGACCATTGTGGCTTCTCGCAATCGTGGCTGGCTGCTGCTACCCATTGTCTATGCCTTTGCGCTTATCAACCTGGCGCTGGCAACCTTCATGCCCAATGAATACATCACCCATCTGGAAGCTACGCCTGGGATGCTGGTGCACATTGGCTTATCGCTCTTTTCCTATGCCACGCTAATTATCGCCGCCCTGTACGCGCTGCAACTGGCGTGGATTGATTACCAACTGAAGAACAAGAAGCTGGCGTTTAACCAGGAAATGCCGCCATTGATGAGTATCGAGCGTAAAATGTTCCACATCACGCAGATTGGCGTGGTGCTGCTAACGCTCACGCTTTGCACTGGCCTGTTCTACATGCACAACTTATTTAGCATGGAAAATATCGACAAGGCTGTGCTCTCTATCGTGGCGTGGTTTGTCTATATTGTGCTGCTGTGGGGACATTATCATGAAGGATGGCGTGGACGCCGCGTCGTCTGGTTTAACGTTGCGGGCGCGGTAATTCTGACACTGGCCTACTTCGGCAGCCGAATTGTCCAGCAGTTAATCAGCTAA", - "dna_sequence_length": 792, - "functions": [ - "cytochrome c assembly protein family inner membrane protein" - ], - "id": "CDS_2590", - "location": [ - [ - "NC_000913", - 2747962, - "+", - 792 - ] - ], 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"UniProtKB/Swiss-Prot:P37908" - ] - ], - "dna_sequence": "CTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTTCCGGGTCCGAAACCGGAATGATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATTGCTGCGTAAGCCAGACCGCCTGATAAGCCTGGTGTTAATCGGCAATAACCTGGTCAATATTCTTGCCTCCGCGCTCGGCACTATTGTTGGGATGCGTTTGTACGGCGATGCGGGCGTGGCAATTGCGACTGGTGTGCTGACTTTTGTCGTACTGGTATTTGCTGAGGTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCGCTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAATTTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTATGCTGATGCGCATGATGGGTATCAAAACCGATATCGTGGTTAGCGGCTCTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCACGAATCACGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGTCGGTGCTCGATCTGGAAAAAATGACCGTTGATGACATCATGGTGCCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCGATTCTGCGCCAACTCTCCCACTCACCTCACGGGCGCATCGTGCTCTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTGGCGGTTGATGTCGGAGAAAAAAGAGTTCACCAAAGAAACCATGCTGCGCGCCGCGGACGAGATCTATTTTGTGCCGGAAGGTACGCCGCTCAGCACGCAGTTGGTAAAGTTTCAGCGCAACAAAAAGAAAGTCGGCCTGGTCGTCAACGAGTATGGAGACATTCAGGGGCTGGTGACGGTTGAAGATATTCTGGAAGAGATTGTCGGCGATTTCACTACGTCGATGTCGCCAACACTTGCCGAAGAGGTCACGCCGCAAAACGACGGTTCGGTGATTATCGATGGCACCGCCAACGTGCGGGAAATCAACAAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAA", 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[ - [ - "NC_000913", - 2750708, - "-", - 594 - ] - ], - "md5": "bf149bc2b58cf6c8bae5365ef51156a7", - "parent_gene": "", - "protein_md5": "fbe5b850e94fe0776f8add514946b672", - "protein_translation": "MSSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKVANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSLDRALEVADKANPDMSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAKA", - "protein_translation_length": 197, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "nadK" - ], - [ - "gene_synonym", - "yfjB" - ], - [ - "gene_synonym", - "EcoGene:EG12192" - ], - [ - "gene_synonym", - "ECK2611" - ], - [ - "gene_synonym", - "yfjE" - ], - [ - "gene_synonym", - "JW2596" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7B3" - ], - [ - "gene_synonym", - "GeneID:947092" - ], - [ - "gene_synonym", - "GI:16130534" - ], - [ - "gene_synonym", - "ASAP:ABE-0008603" - ], - [ - "gene_synonym", - "NP_417105.1" - ], - [ - "gene_synonym", - "b2615" - ] - ], - "dna_sequence": "ATGAATAATCATTTCAAGTGTATTGGCATTGTGGGACACCCACGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCTCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGACGGTAATATGCTGGGCGCGGCACGCACACTCGCCCGTTACGATATTAAAGTTATTGGAATCAACCGTGGCAACCTGGGTTTCCTGACTGACCTTGACCCCGATAACGCCCAGCAACAGTTAGCCGATGTGCTGGAAGGCCACTACATCAGCGAGAAACGTTTTTTGCTGGAAGCGCAAGTCTGTCAGCAAGATTGCCAGAAACGCATCAGCACCGCGATAAATGAAGTGGTGCTTCATCCAGGCAAAGTGGCGCATATGATTGAGTTCGAAGTGTATATCGACGAGATCTTTGCGTTTTCTCAGCGATCTGATGGACTAATTATTTCGACGCCAACAGGCTCCACCGCCTATTCCCTCTCTGCAGGCGGTCCTATTCTGACCCCCTCTCTGGATGCGATTACCCTGGTGCCCATGTTCCCGCATACGTTGTCAGCACGACCACTGGTCATAAACAGCAGCAGCACGATCCGTCTGCGTTTTTCGCATCGCCGTAACGACCTGGAAATCAGTTGCGACAGCCAGATAGCACTGCCGATTCAGGAAGGTGAAGATGTCCTGATTCGTCGCTGTGATTACCATCTGAATCTGATTCATCCGAAAGATTACAGTTATTTCAACACATTAAGCACCAAGCTCGGCTGGTCAAAAAAATTATTCTAA", - "dna_sequence_length": 879, - "functions": [ - "NAD kinase" - ], - "id": "CDS_2593", - "location": [ - [ - "NC_000913", - 2750831, - "+", - 879 - ] - ], - "md5": "4cc43f2ccde04b69b17df7223c1c1d31", - "parent_gene": "", - "protein_md5": "3bac1bedfe1fa3f39f582def0ca2d035", - "protein_translation": "MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCTKGYEVIVEQQIAHELQLKNVKTGTLAEIGQLADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLTDLDPDNAQQQLADVLEGHYISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMIEFEVYIDEIFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINSSSTIRLRFSHRRNDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYSYFNTLSTKLGWSKKLF", - "protein_translation_length": 292, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05824" - ], - [ - "gene_synonym", - "recN" - ], - [ - "gene_synonym", - "ECK2612" - ], - [ - "gene_synonym", - "EcoGene:EG10831" - ], - [ - "gene_synonym", - "ASAP:ABE-0008611" - ], - [ - "gene_synonym", - "GeneID:947105" - ], - [ - "gene_synonym", - "JW5416" - ], - [ - "gene_synonym", - "GI:49176247" - ], - [ - "gene_synonym", - "YP_026172.1" - ], - [ - "gene_synonym", - "b2616" - ], - [ - "gene_synonym", - "radB" - ] - ], - "dna_sequence": "ATGTTGGCACAACTGACCATCAGCAACTTTGCTATCGTTCGTGAGCTTGAGATTGATTTTCATAGCGGCATGACCGTAATAACTGGCGAGACCGGCGCGGGTAAATCTATTGCAATAGATGCCCTCGGTCTTTGTCTCGGTGGTCGCGCTGAAGCCGACATGGTGCGTACCGGCGCTGCTCGCGCTGACCTGTGCGCCCGTTTTTCTCTGAAAGATACGCCAGCGGCTCTGCGCTGGCTGGAAGAAAACCAGCTTGAAGACGGGCATGAATGTTTGCTTCGTCGCGTGATCAGCAGCGATGGTCGCTCCCGTGGTTTCATCAACGGTACAGCTGTTCCTCTGTCACAACTGCGCGAACTGGGTCAGTTGCTGATTCAGATCCATGGTCAGCACGCTCATCAATTACTCACCAAACCTGAGCACCAAAAATTCCTGCTTGATGGCTATGCCAATGAAACCTCTCTACTGCAGGAAATGACCGCACGTTATCAGTTGTGGCATCAAAGCTGCCGTGACCTCGCGCATCATCAACAGTTAAGTCAGGAACGCGCCGCCCGTGCGGAACTGCTGCAATACCAATTAAAAGAACTTAACGAATTTAATCCGCAGCCCGGAGAGTTTGAACAAATCGACGAAGAGTACAAACGTCTGGCGAACAGCGGTCAATTGCTGACCACCAGCCAGAATGCATTGGCATTAATGGCCGACGGTGAAGACGCAAACCTGCAAAGTCAGCTTTACACGGCTAAACAACTGGTGAGCGAATTGATTGGCATGGACAGCAAACTGTCCGGCGTACTTGATATGCTGGAAGAAGCTACCATCCAGATTGCTGAAGCCAGCGATGAACTGCGCCACTACTGCGATCGTCTGGATCTCGATCCCAACCGACTATTTGAACTTGAACAGCGCATCTCAAAACAGATTTCGCTGGCACGTAAACATCACGTCAGCCCTGAGGCATTGCCACAGTATTACCAGTCGCTACTGGAAGAACAGCAGCAACTGGACGATCAGGCCGACTCACAAGAAACGCTTGCGCTGGCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGCCAGCAATATGCAGAAGAACTTGCACAGCTGATCACCGACAGTATGCATGCGCTCTCAATGCCGCATGGGCAGTTTACGATCGATGTTAAATTTGACGAGCATCACCTGGGCGCTGACGGTGCCGATCGTATTGAGTTTCGGGTAACCACCAACCCAGGTCAGCCAATGCAGCCTATTGCCAAAGTCGCATCCGGTGGTGAATTGTCCCGCATCGCACTGGCAATCCAGGTCATCACGGCGCGTAAAATGGAAACCCCGGCACTGATTTTTGATGAAGTGGATGTAGGGATTAGCGGTCCAACAGCGGCAGTTGTCGGCAAACTGCTGCGTCAACTCGGCGAATCAACTCAGGTGATGTGTGTTACCCACCTGCCACAAGTCGCGGGATGTGGTCATCAACACTATTTTGTCAGCAAAGAAACCGATGGTGCGATGACAGAAACGCATATGCAATCCCTGAATAAAAAAGCGCGGTTACAAGAGCTGGCGCGCCTGCTTGGTGGCAGTGAAGTCACACGTAATACACTGGCGAATGCGAAAGAACTGCTTGCAGCGTAA", 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"gene_synonym", - "smqA" - ], - [ - "gene_synonym", - "ECK2613" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A937" - ], - [ - "gene_synonym", - "JW2598" - ], - [ - "gene_synonym", - "NP_417107.2" - ], - [ - "gene_synonym", - "bamE" - ], - [ - "gene_synonym", - "GeneID:945583" - ], - [ - "gene_synonym", - "GI:90111468" - ], - [ - "gene_synonym", - "ASAP:ABE-0008614" - ], - [ - "gene_synonym", - "EcoGene:EG10952" - ], - [ - "gene_synonym", - "b2617" - ] - ], - "dna_sequence": "ATGCGCTGTAAAACGCTGACTGCTGCAGCAGCAGTACTATTGATGTTGACCGCAGGCTGTTCCACTCTGGAGCGAGTGGTTTACCGTCCTGACATCAACCAGGGGAACTATCTGACCGCTAACGACGTATCCAAAATACGTGTTGGCATGACGCAACAACAAGTTGCGTACGCATTGGGTACACCGCTGATGTCCGATCCATTTGGTACGAATACCTGGTTCTATGTCTTCCGCCAGCAACCAGGTCATGAAGGTGTAACTCAGCAAACGCTGACGCTGACCTTTAACAGTAGCGGTGTGTTGACCAATATTGATAACAAACCTGCGCTGAGTGGTAACTAA", - "dna_sequence_length": 342, - "functions": [ - "lipoprotein component of BamABCDE OM biogenesis complex" - ], - "id": "CDS_2595", - "location": [ - [ - "NC_000913", 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"GTGCCAGGTAAAATTGCCGTTGAGGTGGCTTATGCGCTACCTGAGAAGCAGTACCTGCAGCGAGTGACGCTGCAGGAGGGCGCGACGGTTGAAGAAGCTATTCGCGCCAGTGGCTTGCTGGAATTGCGTACCGATATCGATTTAACTAAAAACAAAGTCGGCATTTACAGCCGTCCGGCAAAACTAAGCGATAGTGTGCATGATGGCGATCGGGTGGAGATTTATCGCCCTCTCATTGCCGATCCGAAAGAGCTTCGCAGGCAACGAGCAGAAAAATCAGCGAATAAATAA", - "dna_sequence_length": 291, - "functions": [ - "UPF0125 family protein" - ], - "id": "CDS_2596", - "location": [ - [ - "NC_000913", - 2754298, - "-", - 291 - ] - ], - "md5": "d826b971c9f2ae2edefe64b16a99f557", - "parent_gene": "", - "protein_md5": "ea37373f64cdaa5e869e52b76d9cae61", - "protein_translation": "MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK", - "protein_translation_length": 96, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2615" - ], - [ - "gene_synonym", - "yfjG" - ], - [ - "gene_synonym", - "NP_417109.1" - ], - [ - "gene_synonym", - "GeneID:945614" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGL5" - ], - [ - "gene_synonym", - "EcoGene:EG13193" - ], - [ - "gene_synonym", - "pasT" - ], - [ - "gene_synonym", - "b2619" - ], - [ - "gene_synonym", - "JW2600" - ], - [ - "gene_synonym", - "ratA" - ], - [ - "gene_synonym", - "GI:16130538" - ], - [ - "gene_synonym", - "ASAP:ABE-0008618" - ] - ], - "dna_sequence": "ATGATATTATTTGTTGGATTTTTGTTGATGGAAATTGTTATGCCTCAGATTAGCCGGACCGCACTGGTACCCTACAGCGCGGAGCAAATGTATCAGTTAGTGAATGACGTTCAGTCTTATCCTCAGTTTTTGCCGGGTTGTACCGGAAGTCGGATTCTGGAGTCCACTCCTGGGCAGATGACTGCGGCGGTAGATGTCTCTAAGGCTGGGATCAGCAAAACGTTTACTACCCGCAACCAGTTGACCAGTAACCAAAGTATTCTTATGAATCTGGTGGATGGGCCGTTCAAGAAATTGATTGGTGGATGGAAGTTTACGCCGCTGAGCCAGGAGGCGTGTCGTATCGAGTTTCATCTCGACTTTGAGTTTACCAATAAGTTGATTGAACTCGCCTTTGGTCGCGTGTTTAAAGAGCTGGCGGCTAATATGGTCCAGGCTTTTACGGTTCGTGCGAAAGAGGTTTACAGTGCCAGGTAA", - "dna_sequence_length": 477, - "functions": [ - "toxic UPF0083 family protein inhibitor of 70S ribosome formation" - ], - "id": "CDS_2597", - "location": [ - [ - "NC_000913", - 2754764, - "-", - 477 - ] - ], 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"ATGACGAAGAAAAAAGCACATAAACCTGGTTCAGCGACCATCGCGCTTAACAAGCGCGCCCGTCACGAATACTTTATCGAAGAAGAGTTCGAAGCGGGACTTGCCCTGCAAGGCTGGGAAGTTAAATCCCTGCGCGCAGGAAAAGCCAATATCAGCGACAGCTACGTCCTTCTGCGTGACGGAGAGGCATTTCTGTTTGGCGCTAACATCACGCCAATGGCCGTGGCCTCCACGCATGTGGTGTGCGATCCTACCCGTACCCGCAAGTTACTTCTCAACCAGCGCGAACTGGACTCATTGTACGGTCGCGTCAATCGAGAAGGCTATACCGTAGTGGCGCTCTCCCTGTACTGGAAAAATGCCTGGTGCAAAGTGAAAATCGGCGTCGCCAAAGGTAAGAAACAGCACGATAAACGTTCAGATATCAAAGAGCGCGAATGGCAGGTGGATAAAGCACGTATCATGAAAAACGCCCACCGTTAA", - "dna_sequence_length": 483, - "functions": [ - "tmRNA-binding trans-translation protein" - ], - "id": "CDS_2598", - "location": [ - [ - "NC_000913", - 2754896, - "+", - 483 - ] - ], - "md5": "cdc58663bc5a6d6540f6cb471a10f950", - "parent_gene": "", - "protein_md5": "977ce8806a2aa645622b342adb4254db", - "protein_translation": "MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR", - "protein_translation_length": 160, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417111.1" - ], - [ - "gene_synonym", - "intA" - ], - [ - "gene_synonym", - "ASAP:ABE-0008630" - ], - [ - "gene_synonym", - "slpA" - ], - [ - "gene_synonym", - "EcoGene:EG11783" - ], - [ - "gene_synonym", - "ECK2618" - ], - [ - "gene_synonym", - "JW2602" - ], - [ - "gene_synonym", - "b2622" - ], - [ - "gene_synonym", - "GeneID:946160" - ], - [ - "gene_synonym", - "GI:16130540" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32053" - ], - [ - "gene_synonym", - "intX" - ] - ], - "dna_sequence": "ATGGCAAGAAAAACCAAGCCGTTAACTGATACGGAAATCAAAGCCGCCAAACCTAAAGATGCCGATTACCAGCTTTATGACGGTGACGGGCTTACTCTGTTAATCAAGTCCAGTGGCAGTAAGCTTTGGCAATTCCGTTACTATCGGCCTTTGACCAAGCAGCGAACCAAACAGAGCTTCGGTGCCTATCCTGCCGTCTCGCTTTCTGATGCACGTAAACTCAGAGCCGAATCTAAAGTTTTATTGGCGAAAGACATTGATCCTCAGGAACATCAGAAAGAACAGGTGAGGAATTCTCAAGAGGCCAAAACCAATACCTTCTTGTTAGTTGCCGAGCGTTGGTGGAATGTGAAGAAAACCAGCGTAACAGAGGACTATGCCGACGATATCTGGCGCTCGCTTGAGAGAGATATTTTCCCGGCAATCGGTGATATCAGTATCACTGAGATTAAGGCTCATACTCTGGTTAAAGCAGTTCAGCCGGTTCAGGCCAGAGGTGCATTAGAGACTGTTCGCCGCCTTTGTCAGCGTATTAACGAAGTCATGATTTATGCGCAGAACACAGGCCTGATTGATGCTGTTCCTAGTGTAAATATCGGAAAAGCTTTCGAGAAACCGCAAAAGAAAAACATGCCAAGCATCCGGCCGGATCAACTTCCGCAGCTAATGCACACCATGCGTACGGCAAGTATCAGCATGTCCACAAGATGCCTGTTCATGTGGCAACTTCTAACCATCACCCGCCCTGCCGAAGCTGCTGAGGCTCGATGGGATGAGATCGATTTCAATGCTAGCGAATGGAAAATTCCTGCAGCTCGAATGAAGATGAACCGGGACCATACGGTTCCACTATCTGATGGGGCTCTTGCTATTCTGGAAATGATGAAGCCTCTCAGTGGTGGCCGAGAATTTATCTTTCCTAGCCGTATCAAGCCCAACCAACCAATGAATAGCCAAACAGTGAATGCAGCACTCAAGCGTGCTGGCTTAGGAGGTGTACTTGTTTCACACGGCTTGCGTTCTATCGCCAGTACGGCACTCAATGAGGAAGGATTTCCACCTGATGTCATTGAAGCAGCGCTTGCTCATGTAGACAAAAATGAGGTGCGTCGCGCTTATAACCGCAGTGATTATCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATCTCGTAAAAGCAGCAGATAGTGGTAGCATCGTTTTAACTCATTTGAGCAAAATTCGTCTTGTCGGATAA", 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"gene_synonym", - "JW2603" - ], - [ - "gene_synonym", - "b2623" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52123" - ], - [ - "gene_synonym", - "GI:16130541" - ], - [ - "gene_synonym", - "NP_417112.1" - ], - [ - "gene_synonym", - "GeneID:946123" - ] - ], - "dna_sequence": "ATGGGTATCTTTAAGGCAAAAAACCCATGTACCAAAAATACAATTTTTACAACCTCTAATACATTGATTTATGGTGGTTTTATGATTTCTCTGAATGATTTTTATGAACAAATTTGTAGAAAACGACGTGATCTCGCCTATCACATGTCCGAATGCGAATGGGCGGTGGATACTGATGTTCTAGAGGAAGATCATCCGGAAATACGGATTGAGCTAGGCAGAATGCGAGAGCAATTCTGGAGCTCTGAGAAAATAGGTACTCGTGTGAGGTTATATTCCTGCGATGTACCATGGGAAACAAGGCACCATACAGTGAATGGGCAACTGGAGATAAAGGAAGAATACACTGAATTATATGATCCAGCTCAAGAATGCTGGAAAAATCTAAGTTCAAACCTTACCAAGGAAACGTTTTTACCTCTTGTTATCGAGCCATTTTCCATTAATGACATTTTCAAGGCACACCTTATGTTCGCCTCAATCTCTTTTTTCTGGGGAAAATCTATCATGTCTGAAAATGAAAACGTTGCCTTTAAAGCATTTCATCGGGCTGCGGAGTTATTTGATAAGTGCATAGGTATGACTTGGTTTAACATCTCTGTTTGTAATCAAAAAAAATTATCAGAAGTCAGGCGGAGTGCAGGAAAGAAGGGTGGCAAAAGCAAAGCGGAAGTGTACCATATCATTCAACTGAAGTTGGTTGAGCTAATTAATGACTCTGTTCCGAATGATGGGTGGAAAAATAAGGTTGTAGCAGTTAATGAACTTATCGAACCGCTATGGGATTTTATTCAAATGTCAGAGTTTGAGATAAATAATCAAAATAAAAAATATCGTGTAGCAACAATGAGTCAAGATGCTTTGGTTGATACTATTTTAAATCAATGGTCTTTAAAAAATGAAGATGTAAAACAAGCTTTCGATAGCGCTGTTCGTAGAAAAAAAAGAAGTAAATAA", - "dna_sequence_length": 957, - "functions": [ - "CP4-57 prophage", - "uncharacterized protein" - ], - "id": "CDS_2600", - "location": [ - [ - "NC_000913", - 2758600, - "-", - 957 - ] - ], - "md5": "717f2e8b72c3fad429aa89a47ccc27f1", - "parent_gene": "", - "protein_md5": "782765ef099af6a886be7054baf9a2c1", - "protein_translation": "MGIFKAKNPCTKNTIFTTSNTLIYGGFMISLNDFYEQICRKRRDLAYHMSECEWAVDTDVLEEDHPEIRIELGRMREQFWSSEKIGTRVRLYSCDVPWETRHHTVNGQLEIKEEYTELYDPAQECWKNLSSNLTKETFLPLVIEPFSINDIFKAHLMFASISFFWGKSIMSENENVAFKAFHRAAELFDKCIGMTWFNISVCNQKKLSEVRRSAGKKGGKSKAEVYHIIQLKLVELINDSVPNDGWKNKVVAVNELIEPLWDFIQMSEFEINNQNKKYRVATMSQDALVDTILNQWSLKNEDVKQAFDSAVRRKKRSK", - "protein_translation_length": 318, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008636" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33997" - ], - [ - "gene_synonym", - "EcoGene:EG12112" - ], - [ - "gene_synonym", - "ECK2620" - ], - [ - "gene_synonym", - "NP_417113.1" - ], - [ - "gene_synonym", - "alpA" - ], - [ - "gene_synonym", - "b2624" - ], - [ - "gene_synonym", - "JW2604" - ], - [ - "gene_synonym", - "GeneID:946758" - ], - [ - "gene_synonym", - "GI:16130542" - ] - ], - "dna_sequence": "ATGAACAATCGATCGGCCGTTAGAATACTACGGTTACCAGCGGTTATCCAAAAAACAGGTATGGCACGGGCCACCATCTATGACTGGTTGAACCCCAAATCACCACGATACGATGCCACCTTTCCCAAAAAGCGAATGCTCGGCGTGAAATCTGTCGGATGGATTGAGGCCGAGATTGATGAGTGGTTATCACAACGCTGTAAACTTATTTGA", - "dna_sequence_length": 213, - "functions": [ - "CP4-57 prophage", - "DNA-binding transcriptional activator" - ], - "id": "CDS_2601", - "location": [ - [ - "NC_000913", - 2758644, - "+", - 213 - ] - ], - "md5": "1a9f2ef151f759074ad158f61e9f9d46", - "parent_gene": "", - "protein_md5": "b796e4dc1cb5ef4f9f8833ae45063a1d", - "protein_translation": "MNNRSAVRILRLPAVIQKTGMARATIYDWLNPKSPRYDATFPKKRMLGVKSVGWIEAEIDEWLSQRCKLI", - "protein_translation_length": 70, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944764" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52124" - ], - [ - "gene_synonym", - "yfjI" - ], - [ - "gene_synonym", - "NP_417114.1" - ], - [ - "gene_synonym", - "ECK2621" - ], - [ - "gene_synonym", - "EcoGene:EG13195" - ], - [ - "gene_synonym", - "b2625" - ], - [ - "gene_synonym", - "JW2605" - ], - [ - "gene_synonym", - "ASAP:ABE-0008643" - ], - [ - "gene_synonym", - "GI:16130543" - ] - ], - "dna_sequence": "ATGTTCAATGGTCGTCCTTTCCCTGTAGATGCATTTCCTAAAATTATCAGGAATGCAATTTATGAAGTGGAACAGCATACGCAGGCCCCTCAAGGTTTGATTGCTGCTTCTGCTCTTGGGGTAATTTCTCTTGCCTGTCAGAACCGGATTGATGTTTGCCGATTGAATAATCTACGTGGCCCGGTATCACTTTTCTTAATGACTCTGGCTGAATCAGGTGAACGTAAGAGTACGGTTGATAAACTGCTGATGAAGCCATTATATCAACTGGAAGAGGATTTATTTGAAAAATACACCCACGATCTTACCGCATGGAGAAATGATGAAGCAATTTTTAATATTGAAAAAAAAGCACTGATGTCAAAACTTAAATCAGATATTCGACGTAACAAAGATCACTTGGCAACAAATGAAAGACTTAAAGAACTACTTACGACAAACCCGAAAGCTCCAGTGAGATTCAAATTTTTATTTAACGATGCCACACCTGCAGCTATTAAAGCTCATCTCTGTGGGCACTGGCGATCAGTCGGCATCATGTCTGATGAAGCTGGGATCATTTTTAATGGTTACACACTTAACGAGCTGCCGTTTATCAATAAGATGTGGGATGGTTCAATATTTACGGTGGAAAGGAAAAACGAGCCCGAGAAATTAATTAGAGATGCAAGAATAACACTGTCGCTGATGGTCCAGCCTAATGTTTTTAAGGGTTATATCGACAGGAAAGGAGATATGGCAAAGGGGATTGGATTTTTTGCACGGTGCCTCATGTGCCAGCCTGCTTCAACACAAGGTAACAGAAAAATTTCCAACCCAATTTTTTCAAATGAACATTTGCCGGTATTTCACCAACGTCTTATGGAAATTGTTAATGAGAGCATCATTAAAATTAATGAAAATAATCGCATCTGCCTCCGATTCTCTGCAGAAGCAGAAAGACATTGGATCGAATTCTACAACCAGGTCGAGTCAGAAATGAGAATGATTGGCCTTCTTTATGATTTTAAGGATTATGCTTCTAAAATGGCGGAGAACATGGCGAGGCTTGCTGCCTTACTTCATTACTTCAGCGGTGATGGAGGCGATATATCTGTTACCGCAGTAAAAGCAGCAGTGGAGATAGTGGCTTGGTATATTGAAGAATACATCCGCTTGTTCTCTAAAAAAGAAGAGTTTTCTTTAGATGTTTCAGAAGCAGATGAGCTTTATTGTTGGATAAAAGATTACTGCACGCAAAAATTTTCTTCCTGCATCAAGAAAAATATTATCTTACAATTTGGGCCAAATAAATTTAGAAATCGTGACAAGGCAAATGAATTAATTAGAATCTTAATTTCACAAAACAAAATATTTATATCTTCATGGGGTAAAACAAAAATAATAAACATAACTCATTGTGTTTTTTGA", 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"gene_synonym", - "yfjJ" - ], - [ - "gene_synonym", - "ECK2622" - ], - [ - "gene_synonym", - "NP_417115.1" - ], - [ - "gene_synonym", - "EcoGene:EG13196" - ], - [ - "gene_synonym", - "JW2607" - ], - [ - "gene_synonym", - "b2626" - ], - [ - "gene_synonym", - "ASAP:ABE-0008646" - ], - [ - "gene_synonym", - "GI:16130544" - ] - ], - "dna_sequence": "ATGACATACGATAGTGAATTCGGATCACATGTATCCCTATATCGGGATAGAATCAAACAGGTTATTGATGACTCCCTAAACGAACATCTTAACTCAATGATTCTACGTGTTGATCTGCATGACCCAATTGATACAGAAAATATGGATAACCCATTCTTTCAACCCAGGGTTGACTCTGGTGCTATATCTCGCTTTACCAGTGCGTTAAAAGCAAAGCTTAAACATGATAAGCATATTAAAACTCAACGGAAAGACTGGCCTGATAGTCGACATTCCACTTTACGTTACGCATGGGTCAGAGAATATACCAAAAATAGAAAGCGGCATTACCATTTGATACTGTGTTTCAATCAGGATGCTTATTATCATTTAGGTGATTACGACTTAAACCGTAACACGTTACGTACAATGATAACGACAGCTTGGTACAGTGCACTTGGCATCCCTATAGATAGCTCGGGGAAGTTAGTTAATTACCCGCCAAATGGCAAATACCTTCTCAATCGTAAAAGGGACAACTTTGAGCAGACTTATAGCGATTTGATGAATAGGGTGGATTACATGACCAAAGTAAGGACTAAAATAGTCGGTGACGGAGACCGTAATTTCGGCTGCAGTCGCGGGTAA", - "dna_sequence_length": 627, - "functions": [ - "CP4-57 prophage", - "uncharacterized protein" - ], - "id": "CDS_2603", - "location": [ - [ - "NC_000913", - 2760547, - "+", - 627 - ] - ], - "md5": "aeca150559d8b71f73dff1817528a067", - "parent_gene": "", - "protein_md5": "a7eea83a92562140edcf093fa266e08e", - "protein_translation": "MTYDSEFGSHVSLYRDRIKQVIDDSLNEHLNSMILRVDLHDPIDTENMDNPFFQPRVDSGAISRFTSALKAKLKHDKHIKTQRKDWPDSRHSTLRYAWVREYTKNRKRHYHLILCFNQDAYYHLGDYDLNRNTLRTMITTAWYSALGIPIDSSGKLVNYPPNGKYLLNRKRDNFEQTYSDLMNRVDYMTKVRTKIVGDGDRNFGCSRG", - "protein_translation_length": 208, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008648" - ], - [ - "gene_synonym", - "GeneID:947111" - ], - [ - "gene_synonym", - "yfjK" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52126" - ], - [ - "gene_synonym", - "ECK2623" - ], - [ - "gene_synonym", - "EcoGene:EG13197" - ], - [ - "gene_synonym", - "b2627" - ], - [ - "gene_synonym", - "GI:16130545" - ], - [ - "gene_synonym", - "NP_417116.1" - ], - [ - "gene_synonym", - "JW2608" - ] - ], - "dna_sequence": "ATGACAGAGATCTATGAACAGGCGAAACATAGCCTGCAGGGTGAGGACTTCTCATCGTTCAATTATCTGTTTGCGGTTAACAAGCTGTTGTCTAACCCTGTTTCGTATGACTTGGGACGGGACTTGATCGTGCGAGCTCTCGATTCGCGCGAGCGGTTTTCCGAGCACACCACAATTTTGAAAAATATGGTGAGAAAATCAGGTTTGTTCCCGTATCTCAAAAAGGAGTTCACCAGCCTGACACCGGATGACCTGAGGGTGCTTGAGCTATACCGGACGCCATTCTCGGATGGTTATGTTTTCCACTCAATGCAGTTCCACATATTCGATCTGCTCAAGTCTGGTCAAAACGTGGTGCTGAGTGCACCTACAAGCATGGGCAAAAGTGCAATCGTCGATTCATTGCTCGGCATGGGAACTTTGAAACGGCTTGTTCTGGTTGTTCCAACCGTGGCTCTTGCCGACGAAACCCGTCGCCGACTGCAAGAGCGATTCGGTGACCGATATCAGATCATCCACCACAGTTCCCAAGTGTGCCATTCCGATCAGGCTGTTTATGTGTTAACTCAGGAGCGAGTGAACGAGCGTGACGACATCGTCGACATTGACCTCTTCGTCATTGACGAGTTTTACAAGTTGGCGTTCCGACAACTGAAAAGCGGGGACATTGATCATCAAGACGAACGAGTCATCGAGCTCAACATTGCGTTAAGCAAACTGCTTAAGGTCTCCAGGCAGTTTTACCTGACGGGACCGTTCGTTAACAGCATTCGCGGTCTCGAAAAACTTGGATATCCGCATACTTTCGTTTCTACCGACTTCAATACAGTCGCGCTAGATGTTAAGACGTTCGGCATCAAAGCGAATGACGACAAAGCCAAGCTCAAAGCGCTGGGGGAAATCGCGCACGCATGTGTCGACGCAACGATCATTTATTGCAAGTCACCAACTGTTGCGGGCCTGGTGGCGCGCGAGCTGATCAGGCTTGGGCATGGCACTCCGACTGAGAATCCCCATGTCGACTGGGTCAGCGAAGAGTTCGATGCCGACTGGGATTACACAGTCGCCCTTAGAAACGGTATTGGCTTGCATTTTGGCGCGCTACCGAGGGCACTGCAGCAATACACTGCCGACCAATTCAATGCTGGAAAACTGCGCTTTTTGCTCTGCACCTCCACGATCATTGAAGGAGTCAACACTATCGCTAAGAACGTTGTGATCTACGACAACCGCGATGGAACTCGCAGCATTGACAAATTCACCCATGGGAACATCAAAGGTCGCGCCGGGCGCATGGGCGTTCACTTCGTCGGCAAAATCTTTTGCCTGGAGGAAATCCCGGAAGACAATCTCAATCAAGAGGTGGATATTCCGCTCGGTATTCAGGGCATTGATACCCCAATCAACCTGTTAGCCAGCGTTCAACCAGACCACTTGTCCGAGTTTTCACAGGATCGCTTTGATGAGGTTTTCATAAACGACCGTGTTTCCATCGACCTTGTGAAGAAGCATTCGTACTTCCGTGTCGAGCAGTTCGAAATGCTGCAAAGCATGTTCGAGATGATGGACGATAACGAATTTTCCTCGTTAGTGTTTCACTGGACTCCCGCGACAAACTTCCTCAAGACCTTTGCAAAGATCATTGCCAGACTGGTTCCCCATACGTTCAGTCGCAATGGGGTCCCTGTTAAGCCTACGGATGTCATGATCGCAAAACTTGCCGGCTATTTAAGTGCTGAAAGTTATTCGGAATATCTGAAAAATCAGATCGATTATGCACGACAGTGGATTTCTGAAGGGGAGAAACGTACTCTTTCCATTGCCCTCAACAATGATTTGAAGCTCATAACCAATACCTTCGGCTATACCCTACCTAAGGTGCTCAGCTTGATGGAGGATGTAGTTAAACACCACGCTGTAAAGCGTGGTATACGCAGCAAAGTCGATTACACACATGTCAAATTGGCGTTCGAAAGTTTCCATCTACCACCAGGTGTCAATGCCTTAGAAGAGATTGGCATTCCCATTCAGACGTTACACCGACTGGTAGACTTGCTGGAATTTTCCGACGAGGCTGATGTGGATGAGTTGAGCCAGTATCTTCGGGATACTCAGGACATTTGGAGTAGATCGATTGGGTACGTTGATCAGATGTTTATCAGGCGCGCGCTCGGTATTAGACGACATTGA", 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"MTEIYEQAKHSLQGEDFSSFNYLFAVNKLLSNPVSYDLGRDLIVRALDSRERFSEHTTILKNMVRKSGLFPYLKKEFTSLTPDDLRVLELYRTPFSDGYVFHSMQFHIFDLLKSGQNVVLSAPTSMGKSAIVDSLLGMGTLKRLVLVVPTVALADETRRRLQERFGDRYQIIHHSSQVCHSDQAVYVLTQERVNERDDIVDIDLFVIDEFYKLAFRQLKSGDIDHQDERVIELNIALSKLLKVSRQFYLTGPFVNSIRGLEKLGYPHTFVSTDFNTVALDVKTFGIKANDDKAKLKALGEIAHACVDATIIYCKSPTVAGLVARELIRLGHGTPTENPHVDWVSEEFDADWDYTVALRNGIGLHFGALPRALQQYTADQFNAGKLRFLLCTSTIIEGVNTIAKNVVIYDNRDGTRSIDKFTHGNIKGRAGRMGVHFVGKIFCLEEIPEDNLNQEVDIPLGIQGIDTPINLLASVQPDHLSEFSQDRFDEVFINDRVSIDLVKKHSYFRVEQFEMLQSMFEMMDDNEFSSLVFHWTPATNFLKTFAKIIARLVPHTFSRNGVPVKPTDVMIAKLAGYLSAESYSEYLKNQIDYARQWISEGEKRTLSIALNNDLKLITNTFGYTLPKVLSLMEDVVKHHAVKRGIRSKVDYTHVKLAFESFHLPPGVNALEEIGIPIQTLHRLVDLLEFSDEADVDELSQYLRDTQDIWSRSIGYVDQMFIRRALGIRRH", - "protein_translation_length": 729, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008650" - ], - [ - "gene_synonym", - "EcoGene:EG13198" - ], - [ - "gene_synonym", - "ECK2624" - ], - [ - "gene_synonym", - "GeneID:947110" - ], - [ - "gene_synonym", - "yfjL" - ], - [ - "gene_synonym", - "b2628" - ], - [ - "gene_synonym", - "JW2609" - ], - [ - "gene_synonym", - "GI:16130546" - ], - [ - "gene_synonym", - "NP_417117.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52127" - ] - ], - "dna_sequence": "ATGGAGTCGAACGATTCAGGCGGAGTAGCCGCCAAGCACGGTTTCTTATTTCAGGACTGCGTAGCCGCTTACCATGTCACCCGAATGCTTCGTGACAAGACTATCCGCAGTGTGCGCTGCGAGGTCACAGACGATATCGACATTGTATCTGATGGATACATCGACTTCGTTCAGGTAAAAAGCACCGGCAAAACACGTTGGAACATTTCGGACATCGTTCAGAATTCAAAAGGTGCTGATAAAAAGACGATCCCCTGCAGTTCAATTTTGCACAAATCAATGCAGTGTGAGTCTGACCTGTCCCTTGGACGTAGGTACTCCATCGTCACAGAGGAAAAGGTCAACAAAACCCTTGAGTACTTGACGATCAGCCCAAACGCCCGACTAGATAAGCCAGGTCGACAGGAACTCATCGATGACCTCAACAAACGCACAGACAATTTTTTAACAGACTCAGGTATAAGCGTTTCAGATTGGATCGATGCGGCTACATGGGAAGTGTTTTCATCCCTGCGCGAACTGGAACTTCTAGGGATCAAGAACATACGGCTGGCCTCCCAAGATCTACATGGGGTCATTCTCAGTTCCGAAACCGTCGCCGAAGACATTTGGTGCCGCATCCTTGATACTGTGACGCGCAAGGGCGAGCATTCTCGACGCATTCACAGTGCTGATGACAAGTCCTACTTACGACCAGACCTACTTGAGTGGTTCAAGCAGCGTGTCGAAGATGACCAATCTCGGTCAGGCCGCAAAATCTACGTCAAACGGGACTTACCCCACATCCTTACGCCATTTAGAGCGCCTATGGCTTCGGTCTGCGCTAAGCGTAAAGGCCAGGTTCTACATCAGCAGTACTCACTTAAGAAATACCGCTACAAGCACATCGCGGATAACGTCTGTCAATGGTTGGATGAGGTTTTTCTCCGACCAAAAGAAATGTCTGATATTCATAAACTGACATTCATTGAAAAGCGAGAACGACTAAAGAATTCCGTCTTCAAATCGCTCCATGACGTCAGCGAATTTTTGGGTCGAGTGCTGTTGCACGCAACGATCCGGCAGCACCACGAAAGCCAGCCTATTCCTTGCATGCTATACGTGGAAAAAGCAGGGGCCGAAAAAATTCTTGAAAACGTGCATATCGTTCGCCGCGATCCAGAAGGTGATCAGCTTTGGATTGGCTTCAGCGAGTTGGTGACTGATATTAACATTGCCGTCAGATTGCCGGAGATACGGGATCAGTTGTACGAGGACATTTCGGATTGCATCGATACCGCGCGCAAAAAAATCCTCGACATTAAAGACGATAACTACCTGCTTCGCCACGACATTGACGAAATTCTTGATGGCAGCCAACCTTTCGATGCTCACCTCGATCGTTTCACGTTTGTTCTGTTCGTGGGCTACGACTCTAATCTACTAACCGAGCCTGAAACGCCGGGGTTCGAGGATGACCTGGAGAAAGAAACAGCGGTGCTGTTCGAAAAATTCGCGGCTGACCTCATCGAGGATTCGCCGTTTGCGAATCTTTGCATCCACGTATTCATTTATCCAGCCCCGAGTCTTGAGCGGTTAACCCAATTAGTTGATGAGAAGGTGAGAGAGGTCGTATGA", 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"gene_synonym", - "ASAP:ABE-0008654" - ], - [ - "gene_synonym", - "EcoGene:EG13199" - ], - [ - "gene_synonym", - "GeneID:947108" - ], - [ - "gene_synonym", - "ECK2625" - ], - [ - "gene_synonym", - "yfjM" - ], - [ - "gene_synonym", - "JW2610" - ], - [ - "gene_synonym", - "NP_417118.1" - ], - [ - "gene_synonym", - "b2629" - ], - [ - "gene_synonym", - "GI:16130547" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52128" - ] - ], - "dna_sequence": "ATGGGGGATGATGTCCATCGTTTCGGTAACCTCTTCCTGATCTCACCAAGCAGCAACTCGATACTTAGTAATTATTCGCCAGCAGACAAGAAAAAATTCTACGTCGAAACAGAACGAGCAGAGAGCCCAAAACAAGCCATCATGATGAGCTATAAGGAGTGGGGTCCGGATGGGCAAGGCATCAACAATATAGAAAGCCATGAACACGCGATGTTGACATTGCTCAAAGAGCATCGAGATATGACCCTACCAACCAGGAAATAA", - "dna_sequence_length": 264, - "functions": [ - "CP4-57 prophage", - "uncharacterized protein" - ], - "id": "CDS_2606", - "location": [ - [ - "NC_000913", - 2765776, - "-", - 264 - ] - ], - "md5": "9d0fd1646792b77f23f05d513e9f8401", - "parent_gene": "", - "protein_md5": "7039d5881a1f983ca24a595e677a9ca7", - "protein_translation": "MGDDVHRFGNLFLISPSSNSILSNYSPADKKKFYVETERAESPKQAIMMSYKEWGPDGQGINNIESHEHAMLTLLKEHRDMTLPTRK", - "protein_translation_length": 87, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "std" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52129" - ], - [ - "gene_synonym", - "GeneID:947107" - ], - [ - "gene_synonym", - "ECK2626" - ], - [ - "gene_synonym", - "rnlA" - ], - [ - "gene_synonym", - "NP_417119.1" - ], - [ - "gene_synonym", - "yfjN" - ], - [ - "gene_synonym", - "EcoGene:EG13200" - ], - [ - "gene_synonym", - "ASAP:ABE-0008659" - ], - [ - "gene_synonym", - "b2630" - ], - [ - "gene_synonym", - "JW2611" - ], - [ - "gene_synonym", - "GI:16130548" - ] - ], - "dna_sequence": "ATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCAAATATCGAGACTGAATCCAGACAATTCATTGAAAATAAAAACTATTCAATCCAATCAATTGGTCCTATGCCAGGGTCAAGGGCTGGGCTTCGGGTCGTATTTACCAGACCAGGGGTTAACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTGGGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATTTGTAGAGACAAGCGTTCTACCTGTACTTGAGCTATCAGCAGATGAATCGCATATAGAGTTCAGAGAACACTCTCGTAACGCTCATACCGTAGTGTGGAAAATTATTTCCACCAGCTATCAGGACGAATTGACTGTGAGCCTGCATATCACAACAGGTAAGCTCCAGATTCAGGGCCGACCGCTGTCATGTTACAGAGTTTTCACGTTTAACTTGGCAGCCCTGCTTGATTTACAGGGTTTGGAGAAAGTGCTAATCCGCCAGGAGGATGGTAAAGCTAATATTGTTCAACAGGAGGTTGCCCGCACTTACTTGCAGACTGTAATGGCCGATGCTTACCCGCATCTCCACGTGACTGCCGAAAAATTGCTCGTTTCAGGGCTATGTGTTAAACTCGCCGCCCCTGATTTGCCTGACTACTGTATGTTACTTTATCCTGAACTACGCACCATTGAAGGTGTCTTAAAAAGTAAGATGAGTGGGTTAGGCATGCCAGTACAGCAGCCGGCAGGTTTTGGAACTTACTTTGATAAACCTGCTGCTCATTACATTCTGAAACCGCAATTTGCAGCTACTCTTAGACCGGAACAGATTAACATCATCAGCACAGCCTATACTTTTTTTAATGTGGAACGTCATTCTCTGTTCCACATGGAAACTGTGGTCGATGCCAGCCGTATGATTTCTGATATGGCCCGGTTGATGGGTAAAGCCACTAGAGCGTGGGGAATAATCAAGGACTTATATATTGTTTGA", - "dna_sequence_length": 1074, - "functions": [ - "CP4-57 prophage", - "RNase LS" - ], - "id": "CDS_2607", - "location": [ - [ - "NC_000913", - 2765918, - "+", - 1074 - ] - ], - "md5": "c5323194990e95c80a0315e84e65738b", - "parent_gene": "", - "protein_md5": "13f92cde132463e80023a16e505d0bf8", - "protein_translation": "MTIRSYKNLNLVRANIETESRQFIENKNYSIQSIGPMPGSRAGLRVVFTRPGVNLATVDIFYNGDGSTTIQYLTGANRSLGQELADHLFETINPAEFEQVNMVLQGFVETSVLPVLELSADESHIEFREHSRNAHTVVWKIISTSYQDELTVSLHITTGKLQIQGRPLSCYRVFTFNLAALLDLQGLEKVLIRQEDGKANIVQQEVARTYLQTVMADAYPHLHVTAEKLLVSGLCVKLAAPDLPDYCMLLYPELRTIEGVLKSKMSGLGMPVQQPAGFGTYFDKPAAHYILKPQFAATLRPEQINIISTAYTFFNVERHSLFHMETVVDASRMISDMARLMGKATRAWGIIKDLYIV", - "protein_translation_length": 357, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52130" - ], - [ - "gene_synonym", - "GeneID:947113" - ], - [ - "gene_synonym", - "ECK2627" - ], - [ - "gene_synonym", - "rnlB" - ], - [ - "gene_synonym", - "yfjO" - ], - [ - "gene_synonym", - "NP_417120.2" - ], - [ - "gene_synonym", - "EcoGene:EG13201" - ], - [ - "gene_synonym", - "b2631" - ], - [ - "gene_synonym", - "ASAP:ABE-0008665" - ], - [ - "gene_synonym", - "GI:90111470" - ], - [ - "gene_synonym", - "JW5418" - ] - ], - "dna_sequence": "TTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACGAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGATCATGCTGGATACGGCCAAAATTATTGATGAGCAGGACGTTCCGACACATATCCTGAGCAAACTGACTTTTACTTTACGTAATCATCCTGAGTACCTAGAAGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGA", - "dna_sequence_length": 372, - "functions": [ - "CP4-57 prophage", - "uncharacterized protein" - ], - "id": "CDS_2608", - "location": [ - [ - "NC_000913", - 2766984, - "+", - 372 - ] - ], - "md5": "8f273558df5eb868f1560e6f4dd2936d", - "parent_gene": "", - "protein_md5": "0c066ac7ccd9f2a815dddc2a9e736501", - "protein_translation": "MFEITGINVSGALKAVVMATGFENPLSSVNEIETKLSALLGSETTGEILFDLLCANGPEWNRFVTLEMKYGRIMLDTAKIIDEQDVPTHILSKLTFTLRNHPEYLEASVLSPDDVRQVLSMDF", - "protein_translation_length": 123, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52131" - ], - [ - "gene_synonym", - "ECK2628" - ], - [ - "gene_synonym", - "EcoGene:EG13202" - ], - [ - "gene_synonym", - "GeneID:947124" - ], - [ - "gene_synonym", - "b2632" - ], - [ - "gene_synonym", - "ASAP:ABE-0008669" - ], - [ - "gene_synonym", - "yfjP" - ], - [ - "gene_synonym", - "GI:49176249" - ], - [ - "gene_synonym", - "YP_026173.1" - ], - [ - "gene_synonym", - "JW5419" - ] - ], - "dna_sequence": "ATGAAAAATTTTGAAGTTCTGCAGCCACTACAGAACTCCCTTTCCGGTCTACCGCTATGGGTATCTGAACGTATATTGCAGCAGATAAATCAGTTAACCCACTACGAGCCAGTGATCGGCATCATGGGTAAAACTGGGGCGGGAAAGAGTAGCCTTTGCAATGCCCTGTTTGCCGGTGAAGTATCGCCGGTCAGCGATGTAGCGGCCTGTACACGTGATCCTTTACGCTTTCGCCTGCAGATTGGAGAACACTTTATGACCATCGTGGATCTGCCCGGCGTGGGCGAAAGTGGCGTTCGCGATACCGAGTATGCTGCGCTGTACCGCGAACAACTTCCCCGGCTCGACCTGATTCTGTGGCTGATTAAGGCTGATGATCGGGCACTGGCGACTGATGAGCATTTTTACCGTCAGGTGATTGGCGAAGCATACCGGCATAAGATGCTGTTTGTTATCAGCCAGTCAGACAAAGCTGAACCCACCAGCGGTGGAAATATCCTTTCCACAGAGCAGAAACAAAATATCAGCCGCAAAATCTGCCTGCTGCATGAGCTATTCCAGCCCGTGCATCCGGTGTGTGCCGTGTCGGTTCGCCTGCAGTGGGGACTAAGGGTGATGGCAGAGCGGATGATTAAGTGTCTGCCGCGTGAGGCCAGCAGCCCGGTAGTAGCGCTACTGCAACATCCCTTTCGAACAACGGTAGCCCGGGAGCAGGCACGTGACGATTTCGGTGAAACCGTAGGTGCCATACTCGATACGGTAAGCACCTTTCCCCTTATTCCCGCCCCGGTGCGGACCATTATTCAGGCCGTGCGTTCCTCGGTGGTGTCAGTGGCCCGCGCTGTCTGGGATTTCTTCTTCTGA", - "dna_sequence_length": 864, - "functions": [ - "CP4-57 prophage", - "50S ribosome-binding GTPase family protein" - ], - "id": "CDS_2609", - "location": [ - [ - "NC_000913", - 2767710, - "+", - 864 - ] - ], - "md5": "3d2ba462dd023b12dcb17887a6762f54", - "parent_gene": "", - "protein_md5": "86ef7344ad319eaa7a2d5bd86aec3683", - "protein_translation": "MKNFEVLQPLQNSLSGLPLWVSERILQQINQLTHYEPVIGIMGKTGAGKSSLCNALFAGEVSPVSDVAACTRDPLRFRLQIGEHFMTIVDLPGVGESGVRDTEYAALYREQLPRLDLILWLIKADDRALATDEHFYRQVIGEAYRHKMLFVISQSDKAEPTSGGNILSTEQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLRVMAERMIKCLPREASSPVVALLQHPFRTTVAREQARDDFGETVGAILDTVSTFPLIPAPVRTIIQAVRSSVVSVARAVWDFFF", - "protein_translation_length": 287, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52132" - ], - [ - "gene_synonym", - "ECK2629" - ], - [ - "gene_synonym", - "EcoGene:EG13203" - ], - [ - "gene_synonym", - "GeneID:947127" - ], - [ - "gene_synonym", - "JW2614" - ], - [ - "gene_synonym", - "b2633" - ], - [ - "gene_synonym", - "yfjQ" - ], - [ - "gene_synonym", - "GI:16130551" - ], - [ - "gene_synonym", - "ASAP:ABE-0008673" - ], - [ - "gene_synonym", - "NP_417122.1" - ] - ], - "dna_sequence": "ATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGCAGCGGGAAGGCTTCCAGCCATTCTTTGCCTGTCAGACACGGGTACGTGACCCCCGTCGTCGTGAGCATACTAAGCATATGCTGCGCCTACGTCGGGAGGGGCAAATTACCGGTAAACAGGTTCCGGAAATTATCCTGCTTAACTCTCACGATGGCACCAGTTCGTACCAGATGCTGCCGGGCATGTTCAGGGCGGTGTGCCAGAACGGTCTGGTCTGCGGCGAGTCGTTTGGCGAGGTGCGGGTGCCACACAAGGGGGATGTGGTGAGTCAGGTTATTGAGGGGGCGTATGAAGTGCTGGGGATTTTTGAGCGTGTGGAAGAAAAGAGGGATGCCATGCAGTCGTTGCTTTTACCGCCACCTGTGCAGCAGGCACTGGCAAAAGCAGCGCTTACGTATCGCTTTGGTGAGGACCACCAGCCGGTTACTGAATCGCAGATACTCTCCCCACGCCGCTGGCAGGATGAGAGCAATGACCTTTGGACCACCTATCAGCGGATTCAAGAAAACCTGATTAAGGGCGGACTCAGTGGGCGTAATGCTAAAGGCGGACGAACTCATACTCGTGCCGTGCGTGGCATTGACGGGGATGTGAAGCTTAACCGTGCGCTGTGGGTGATGGCAGAAACACTGCTCACGCAACTGCAGTAG", - "dna_sequence_length": 822, - "functions": [ - "CP4-57 prophage", - "uncharacterized protein" - ], - "id": "CDS_2610", - "location": [ - [ - "NC_000913", - 2768665, - "+", - 822 - ] - ], - "md5": "ffcf1d6e66a8a4de01df0657047bb3d7", - "parent_gene": "", - "protein_md5": "9214e8adc4840f03ece74a2dda668917", - "protein_translation": "MTRLASRFGAANLIRRDRPLTREELFRVVPSVFSEDKHESRSERYTYIPTISLLDSLQREGFQPFFACQTRVRDPRRREHTKHMLRLRREGQITGKQVPEIILLNSHDGTSSYQMLPGMFRAVCQNGLVCGESFGEVRVPHKGDVVSQVIEGAYEVLGIFERVEEKRDAMQSLLLPPPVQQALAKAALTYRFGEDHQPVTESQILSPRRWQDESNDLWTTYQRIQENLIKGGLSGRNAKGGRTHTRAVRGIDGDVKLNRALWVMAETLLTQLQ", - "protein_translation_length": 273, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2630" - ], - [ - "gene_synonym", - "JW2615" - ], - [ - "gene_synonym", - "EcoGene:EG13204" - ], - [ - "gene_synonym", - "GI:16130552" - ], - [ - "gene_synonym", - "yfjR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52133" - ], - [ - "gene_synonym", - "b2634" - ], - [ - "gene_synonym", - "NP_417123.1" - ], - [ - "gene_synonym", - "GeneID:947309" - ], - [ - "gene_synonym", - "ASAP:ABE-0008676" - ] - ], - "dna_sequence": "ATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGTGAAACGTTGAGCGTGCGCAAACTGGCGGCTGAGTTTGGCGTGTCAGTGCGCACGCTGCGGCGTGATTTTCGTGAACGACTGATGTATCTGGACCTGGAGTATCAGTCCGGATACTGCCGCTTACGCACTGCTGGCAGTGAGATGCAGATGGTGCCCGACGTGCTTATCTTTGCCCACCGCAGCGGGCTGGCCGGGCTTTTTCCCGGCCTTGACCGCCGTCTGGTGAATGCACTGCTGATGTGCGATGAGTCTCCCTGCGTGATAGCACCAGCCAATCCGGTTCCTTCGCCTTCAGGAGCATTGTCTTTCTGGAGACTGATTCAGGCCATTACCGGGCGCAGGCGGGTGACGCTGATTGCAGAGGGGCGACGCTGTGAGCGCCTAGCTCCCTGCCGGTTACTCATCCACCAGCAGACCTGGTATCTGGTGGCTGAACACGAAGGGCATATCGCCGTATTCACACTTGATGAAATCCATCTGATTCAGCCTTTGCAGGAGACTTTTCGCCGCAATGACAGTCTGTGTCGCCTGGTTGAAGACCCGGTCTTCATTCAGGCCTTACCCCATTTTCGCTTTATCCAGCATTCACTGCTTACGTTTGTTCCGGCCGACAGCCCACCGGAATAG", - "dna_sequence_length": 702, - "functions": [ - "CP4-57 prophage", - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_2611", - "location": [ - [ - "NC_000913", - 2769703, - "+", - 702 - ] - ], - "md5": 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"GTGCCCGTTATTGCCATTATCGCCATTGTTATCATCGTCATCATTCTGAACAAAACCGGAGTGTCCGACAGCCTCACGGCCCTGACACTTGCAACCGTTGCCGCACTACTGACGGGAGGTGGTGCAGCCGGTGCTGCCAGTGTCGCGCTGACGCCGTTCGTCGGCGTGCCGGTGGGTATTTTTGTGGGAATTTATGTCTTTGCCAAAGTGGTTCGTCTGATTTCAGGGAAAAAATAA", - "dna_sequence_length": 237, - "functions": [ - "CP4-57 prophage", - "putative inner membrane protein" - ], - "id": "CDS_2612", - "location": [ - [ - "NC_000913", - 2770445, - "+", - 237 - ] - ], - "md5": "c2829ce4448c27cb7cec10d6981b146d", - "parent_gene": "", - "protein_md5": "c42801ba3b0c9f03522703caf0787af3", - "protein_translation": "MPVIAIIAIVIIVIILNKTGVSDSLTALTLATVAALLTGGGAAGAASVALTPFVGVPVGIFVGIYVFAKVVRLISGKK", - "protein_translation_length": 78, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2632" - ], - [ - "gene_synonym", - "NP_417124.4" - ], - [ - "gene_synonym", - "EcoGene:EG13205" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:O52982" - ], - [ - "gene_synonym", - "yfjS" - ], - [ - "gene_synonym", - "ASAP:ABE-0008680" - ], - [ - "gene_synonym", - "GeneID:945668" - ], - [ - "gene_synonym", - "b2636" - ], - [ - "gene_synonym", - "JW5921" - ], - [ - "gene_synonym", - "GI:90111472" - ] - ], - "dna_sequence": "ATGAAACGTAAAACACTACCTCTGCTGGCGCTGGTTGCCACCTCTCTGTTTCTGAGCGCCTGCGATGACAGGAGTGATGACCTCAAAGCTATCAGTAAATTTAAGGACCTCACGCCCCCGCGCTTCAGCGATGTGGTCAGCCGTCAGGATGATGTCAGCGAAGAATGGTCACAGGTTGGCTTCTCATCCGGTCTCACCCTGCAGGTCTTACGTACCCGTGAGTCGCCCGATGGTTGCGAGGGTGGCAGTTACTACTATCTGGTAGATATGGAGGAGAAAACCGTCCAGCCGCTGATGAATGCGCTTTGTATTGCCGACAATATCAAACTGGAATACCACGAAGTTACGGACCCGTATACGAAAGAAAAATACTTCGAATATTCCCATGACGGCAAACTGATGGGACGGCTGCTGATACCGTCAAACCCTGATAACCGGGAATAA", - "dna_sequence_length": 444, - "functions": [ - "CP4-57 prophage", - "uncharacterized protein" - ], - "id": "CDS_2613", - "location": [ - [ - "NC_000913", - 2770681, - "+", - 444 - ] - ], - "md5": "1e5395f9444ccac844d02c7bbce09c0e", - "parent_gene": "", - "protein_md5": "39b9328fc6405ef49c5b675c8ea853bc", - "protein_translation": "MKRKTLPLLALVATSLFLSACDDRSDDLKAISKFKDLTPPRFSDVVSRQDDVSEEWSQVGFSSGLTLQVLRTRESPDGCEGGSYYYLVDMEEKTVQPLMNALCIADNIKLEYHEVTDPYTKEKYFEYSHDGKLMGRLLIPSNPDNRE", - "protein_translation_length": 147, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2633" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52135" - ], - [ - "gene_synonym", - "EcoGene:EG13206" - ], - [ - "gene_synonym", - "NP_417125.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008683" - ], - [ - "gene_synonym", - "b2637" - ], - [ - "gene_synonym", - "GI:16130554" - ], - [ - "gene_synonym", - "yfjT" - ], - [ - "gene_synonym", - "JW2618" - ], - [ - "gene_synonym", - "GeneID:947616" - ] - ], - "dna_sequence": 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"ASAP:ABE-0008690" - ], - [ - "gene_synonym", - "GeneID:947563" - ], - [ - "gene_synonym", - "ECK2635" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52137" - ], - [ - "gene_synonym", - "EcoGene:EG13208" - ], - [ - "gene_synonym", - "b2641" - ], - [ - "gene_synonym", - "ASAP:ABE-0008687" - ], - [ - "gene_synonym", - "yfjV" - ], - [ - "gene_synonym", - "ASAP:ABE-0008692" - ], - [ - "gene_synonym", - "ypjM" - ], - [ - "gene_synonym", - "ypjL" - ], - [ - "gene_synonym", - "JW5922" - ] - ], - "dna_sequence": "AGAGCGCTGTTCACCTGGAAAGTCTTGCTCGGTGCCGCTGTTGATGCGTTGTTTGCCAATGACGGCGCCGCGCTGATCCTGACGCCGATTGTGATTGCGATGCTGATCGCACTGGGTTTCAGCCAGGGCACGACACTGGCCTTTGTCATGGCTGCAGGATTTATTGCAGATACGGCCAGCCTGCCGCTCATTGTTTCTAACCTGGTGAATATCGTCTCGGCGGACTTCTTCGGTCTGAGCTTTGCGCAGTACGCCTCCGTTATGATCTCCGTGGATGCGGCAGCGATTGCGGCCACGCTGATTATGCTGTATCTCTTCTTTCGCAGAGTTATTCCGGCAACGTATTAAGTTTCGCTGCTGAAGACGCCTGCCAGTGCGATCAAGGATCTGGCAACCTTCAGGGCGGGCTGGATTGTCCTGTTATTGCTGCTTGTCGGTTTCTTCTTTCTGGAGCCGCAGGGAATCCTGGTCAGTGCGATAGCGGCCGCTGGCGCAGCAGTGCTGTTTGTGGTGGCGAAAAGAGGTCATTCGATCAACACCGGAAAAGTCCTGCGCGGTGCGCCATGGCAGATCGTTATTTTCTCACTGGGCATGTACATCGTGGTCTATGGCCTGCGCAATGCAGGGTTCACGGAGTACCTGTCTGGCGTGCTGAATCTGCTGGCAGACAAGGGGTTATGGGCAGCGACGTTCGGCACCGGCTTCTTGACGGCATTTCTCTCATCAGTGATGAACAATATGCCGACGGTGCTGATTGGTGCGCTGTCGATTGACGGGAGTACGGCGACTGGCGTCGTCAAAGAGGCAATGATTTATGCCAATGTGATTGGCTGTGATTTAGGCCCGAAAATCACCCCGATTGGCAGTCTGGCAACTCTGCTGTGGCTGCATGTGCTTGCCCAGAAAAATATGACAATCACTTGGGGATATTACTTCCGTACCGGCATTGTCATGACTGTGCCGGTGCTGTTTGTCACTCTGGCCGCGCTGGCGTGGCGGCTCTCTGTCACTTTGTAA", 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"ATGGCTTTTGTATCAGAAAGAGAAATTGTAAGAAAGATATTTAGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTTCTCTTTCAATATTTTACCGCTGCCTTCACAAAAGGTAATTGTTATGAATGCTCAATGAAACTTGATTACATAAAACAATTTTATTTTTCACTGGAAACCGCATGGTACCTCATATCTGCTGTTGCAGTATTTATTGCATCTGTTTTTATACAGCATAGAATTAAAGCTTATTTAACATTATTAGCTATTACATGGATTGTACTAACAATAACAGATGTGGCGTTAATACACGCCTTAGACAATATAGCCATGAATAATATTTTGTTAAATATACTATATAATCTTTTTGGGGCGATTTTATTGTCACTGTTTATGTGTTTATCAAATTCCCTCCTTTTCCACCTTAATAAGATAAAACATATTCCAATGATTTTATCGGCAATGATTCCATTAGTTTCCGCAATAATAATAGCCATACTCATAACCGCTGTTATATATTTATTGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTAAAAAATCTTTTCTGAATGTAAAAAAGCTAGAAATCACACAGAAACTTCCAATGATGGGGTTCATACAAGGTGAATCCGCTGATGTGATGCCTAAAGCAGCATCCAGGTTAAGTTTGAGCAAGCAAGATGATAAATTTATGCTAGCCTCAAGTGTTACTGACTCTCAAATAAAATTTAAATCAAACAATGCACAATTGATGGTTGCTTTCGCATTTATGCCAATAACAACGAATGGTATTTTACATGATTATACATACGATATAATAATAAATGATAAAAAATATAAAATTGAAAATCATGTTGCACCTCTATCTAGGCTTGATAAAAATAAGAAGATGAAGTGTGAATACCAGCAAATATCGGATTTAACAAATACGTATAACATTAATGCAAATTACTTAACGGGTTTTTTACTTGTCCTAAAACCAGATGATATTATTAATTACAACAATAGCCCTTCCGTACTACTCAAGACTGATTTTGCGTTCTATAAAAAAACATACCAGAAGCTTGATAAAATATATGATGACATAAGCAATGGAAAATTATCTTCACTGAGAGCAACAGGTATCTCCCAGTTTAGTATCAACGGGAAACATTTGTCGTTAAGGCCAGAATCGGAGATTATTATTTCTGAAGGGAGTTTGTATGGACTAGTTAATAAAAGCAAAAAAATCAAAATATATGGCACAGCAGATCTTGTTTTTGTTGATAACAAGATAATGAACCTTCGTAAAATAACTTATTTGCAATCTAAGCTAGAAATTTTTGGTTCTTCTATTATGGATATATTAAAGTATATATTTGGTTTAGGTCTGCTAGCAATTTCTATAAAATTCATTCATTCTTACTTTAAGAATGATGTGAATGAAAATTTATTCTTGTAA", 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"gene_synonym", - "b4644" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P58095" - ], - [ - "gene_synonym", - "EcoGene:EG13309" - ], - [ - "gene_synonym", - "ECK4438" - ], - [ - "gene_synonym", - "ypjI" - ], - [ - "gene_synonym", - "GeneID:5625570" - ] - ], - "dna_sequence": "ATGAGCAACTCTGAAGGTTGGTAGTCATTTTAGCAAACGCTTTCTGGTCTGCCGCAGTGGGCATCGGCTGATTGCGTAGCAGGGCCACTGGTATCTGCCGGTATCACCGACATTAACATTGAAGACGACCAGGGCATTCACGTCCGCCTGATAGTTCGTGATGCCGAAGGTCGGATGGTTTGGCGGGCATGGAACTTTGAACCGGACGCCGGTGAAGGTTTTAACCGCTATATCCACAGGTCAGGCATCCGCACCGACACCTTCCCCCGCTGA", - "dna_sequence_length": 273, - "id": "CDS_2618", - "location": [ - [ - "NC_000913", - 2775545, - "+", - 180 - ], - [ - "NC_000913", - 2775724, - "+", - 93 - ] - ], - "md5": "42a16acc8cc24cd030669e41dad96c0a", - "parent_gene": "", - "protein_md5": "fd0137d7be29a3924411e543cfeae2d7", - "protein_translation": "MSNSEGW", - "protein_translation_length": 7, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417130.1" - ], - [ - "gene_synonym", - "b2643" - ], - [ - "gene_synonym", - "GeneID:947126" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52139" - ], - [ - "gene_synonym", - "EcoGene:EG13210" - ], - [ - "gene_synonym", - "JW2624" - ], - [ - "gene_synonym", - "ECK2639" - ], - [ - "gene_synonym", - "ASAP:ABE-0008704" - ], - [ - "gene_synonym", - "GI:16130558" - ], - [ - "gene_synonym", - "yfjX" - ] - ], - "dna_sequence": "ATGACAACACAGACACAGTACGACCTCGTACCCGCTAACGGATCCGAATTTGAGTTGAGCGTAACGCAGGTACCCGATGAACAGCATATCCGCTTCTGGCCGCAGCACTTTGGCACCATCCCGCAGTGGATAACGCTGGAACCGCGCATTTTCGCCTGGATGGACCGCTTCTGTGATGAGTACTGCGGGGGTATCTGGTCCTTTTACACGCTCAGCAATGGCGGAGCGTTTATGGCTCCTGATGCTGACGGTGACGATAAATGGCATTTGCTCAACGGCATGAATGGCAATGGTGCGGAAATGAGCGCGGAAGCCGCAGGTATCGCTGTCTGCCTGATTGAATATAGCCATCACGCCTGCCTCACCGAATGCGATGCCATGACGGAGCACTATTACCGCCTGCGGGATTACGCTCTGCAGCACCCTGAATCCAGCGCCATTATGCGCATTATTGATTAA", - "dna_sequence_length": 459, - "functions": [ - "CP4-57 prophage", - "putative antirestriction protein" - ], - "id": "CDS_2619", 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"ATGATGGAACAGTCACTCATCCCACAGACACCGGTACTTCCACTGACCGCACAACGCACGGTAAAACGCGCCTTAACGCTGCTTGACCGACACCTGCGCGAAACAGGCGTGGCATTCACCTCCACTCAGGCTGCTCGTGACTGGCTGAAGCTGAAAATGGCGGGGCTGGAGCGTGAAGAATTTATGATGCTGTATCTGAACCAGCAGAACCAGTTGATTGCCCACGAAACCCTGTTTGCCGGTTCTATTAGCAGTACCGAGGTACATCCCCGTGAGGTGGTCAAACGCGCCCTGTATTTCAATGCAGCAGCAGTGATACTGGCGCATAACCACCCCTCCGGCGACACTACTCCCAGCCAGGCAGATAAGACTATAACGCAGCGTCTGGTGCAGGCGCTTCAGCTCGTTGATATCCGTGTCCCTGACCATCTGATTGTTGGTGGCAGGCAAATCTATTCGTTCGCAGAACACGGTCTGCTTTGA", - "dna_sequence_length": 483, - "functions": [ - "CP4-57 prophage", - "putative DNA repair protein" - ], - "id": "CDS_2620", - "location": [ - [ - "NC_000913", - 2776386, - "+", - 483 - ] - ], - "md5": "d2503d1304045b360a3be4102288c943", - "parent_gene": "", - "protein_md5": "ed6a6cc80b592178b5058c4a1a3a4bca", - "protein_translation": "MMEQSLIPQTPVLPLTAQRTVKRALTLLDRHLRETGVAFTSTQAARDWLKLKMAGLEREEFMMLYLNQQNQLIAHETLFAGSISSTEVHPREVVKRALYFNAAAVILAHNHPSGDTTPSQADKTITQRLVQALQLVDIRVPDHLIVGGRQIYSFAEHGLL", - "protein_translation_length": 160, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14330" - ], - [ - "gene_synonym", - "ECK2641" - ], - [ - "gene_synonym", - "b4548" - ], - [ - "gene_synonym", - "ASAP:ABE-0285069" - ], - [ - "gene_synonym", - "JW5421" - ], - [ - "gene_synonym", - "GeneID:1450287" - ], - [ - "gene_synonym", - "GI:94541123" - ], - [ - "gene_synonym", - "YP_588466.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P58033" - ], - [ - "gene_synonym", - "ypjJ" - ] - ], - "dna_sequence": "ATGAGAATTATCAGTAAACGCCGGGCAATGACGATATACCGCCAGCATCCTGAGTCCCGAATCTTTCGCTACTGCACCGGAAAATATCAGTGGCACGGTAGCGTCTGTCATTACACCGGCAGGGATGTTCCGGATATCACAGGAGTCCTGGCTGTGTACGCCGAACGCCGCAGGACCGCAGCGGACCGTATGCTTGACTGA", - "dna_sequence_length": 201, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2621", - "location": [ - [ - "NC_000913", - 2776877, - "+", - 201 - ] - ], - "md5": "e7fc292e07d3687fb970037506103b69", - "parent_gene": "", - "protein_md5": "a8560f0c0cf40e171a329a999299e967", - "protein_translation": "MRIISKRRAMTIYRQHPESRIFRYCTGKYQWHGSVCHYTGRDVPDITGVLAVYAERRRTAADRMLD", - "protein_translation_length": 66, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52141" - ], - [ - "gene_synonym", - "GeneID:947123" - ], - [ - "gene_synonym", - "ECK2642" - ], - [ - "gene_synonym", - "b2645" - ], - [ - "gene_synonym", - "JW2626" - ], - [ - "gene_synonym", - "EcoGene:EG13212" - ], - [ - "gene_synonym", - "NP_417132.1" - ], - [ - "gene_synonym", - "yfjZ" - ], - [ - "gene_synonym", - "ASAP:ABE-0008709" - ], - [ - "gene_synonym", - "GI:16130560" - ] - ], - "dna_sequence": "ATGAGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCTGCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGTCCTAAGCTGGATGTGGTATTTCCACATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCACAACGGTTTTACCTGCGAAGCCGATACTCTTGGTAGTTGCGGCTACGTATACATCGCTGTTTACCCCACTCAACGCTAA", - "dna_sequence_length": 318, - "functions": [ - "CP4-57 prophage", - "antitoxin of the YpjF-YfjZ toxin-antitoxin system" - ], - "id": "CDS_2622", - "location": [ - [ - "NC_000913", - 2777115, - "+", - 318 - ] - ], - "md5": "eb917d531a31f2d42105ca54096de35a", - "parent_gene": "", - "protein_md5": "c208ea9931af18c11a210fd6250ba6c9", - "protein_translation": "MSNTTWGLQRDITPRLGARLVQEGNQLHYLADRASITGKFSDAECPKLDVVFPHFISQIESMLTTGELNPRHAQCVTLYHNGFTCEADTLGSCGYVYIAVYPTQR", - "protein_translation_length": 105, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947131" - ], - [ - "gene_synonym", - "NP_417133.1" - ], - [ - "gene_synonym", - "ECK2643" - ], - [ - "gene_synonym", - "b2646" - ], - [ - "gene_synonym", - "JW2627" - ], - [ - "gene_synonym", - "ASAP:ABE-0008711" - ], - [ - "gene_synonym", - "ypjF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46953" - ], - [ - "gene_synonym", - "GI:16130561" - ], - [ - "gene_synonym", - "EcoGene:EG14284" - ] - ], - "dna_sequence": "ATGAACACTCTACCTGCTACAATTTCGCAGGCGGCGAAGCCCTGCCTGTCGCCAGTGGCTGTCTGGCAAATGCTACTGACACGCCTGCTGGAACAACACTATGGCCTGACACTGAACGACACGCCGTTCAGTGATGAAACTGTTATTAAGGAACATATCGATGCTGGTATCACTCTGGCCGATGCAGTCAATTTTCTGGTGGAAAAGTACGAACTGGTACGTATCGATCACAGAGGATTTTCGTGGCAACAACAGTCTCCATATATTTCCGTAGTAGATATTCTGCGAGCAAGGCGCTCTACCGGCTTGCTAAAAACTAATGTGAAATAA", - "dna_sequence_length": 330, - "functions": [ - "CP4-57 prophage", - "toxin of the YpjF-YfjZ toxin-antitoxin system" - ], - "id": "CDS_2623", - "location": [ - [ - "NC_000913", - 2777453, - "+", - 330 - ] - ], - "md5": "68a5ad6d9ee6b1708af508603b05bb6d", - "parent_gene": "", - "protein_md5": "31148b73d1e24072fc7145d5f28825bb", - "protein_translation": "MNTLPATISQAAKPCLSPVAVWQMLLTRLLEQHYGLTLNDTPFSDETVIKEHIDAGITLADAVNFLVEKYELVRIDHRGFSWQQQSPYISVVDILRARRSTGLLKTNVK", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417134.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52143" - ], - [ - "gene_synonym", - "GeneID:948630" - ], - [ - "gene_synonym", - "ECK2644" - ], - [ - "gene_synonym", - "b2647" - ], - [ - "gene_synonym", - "EcoGene:EG13213" - ], - [ - "gene_synonym", - "ASAP:ABE-0008713" - ], - [ - "gene_synonym", - "ypjA" - ], - [ - "gene_synonym", - "JW5422" - ], - [ - "gene_synonym", - "GI:90111474" - ] - ], - "dna_sequence": "ATGAACAGGACCAGTCCCTATTATTGTCGCCGCTCAGTACTTTCCTTATTGATATCTGCCTTGATATATGCCCCGCCCGGGATGGCTGCCTTCACTACTAATGTTATTGGTGTGGTAAACGATGAGACTGTAGATGGCAACCAAAAAGTGGATGAACGAGGTACAACAAATAACACTCATATTATCAACCATGGCCAGCAGAATGTTCATGGCGGGGTATCTAATGGAAGTCTTATTGAATCTGGTGGATATCAAGATATAGGAAGTCATAACAATTTTGTGGGGCAGGCTAATAATACAACCATTAACGGTGGCAGACAGTCAATTCATGACGGGGGTATTTCCACAGGTACGACAATCGAGAGTGGCAATCAGGACGTTTATAAAGGGGGTATCAGCAATGGAACGACAATTAAGGGCGGTGCTTCACGCGTAGAGGGAGGGAGTGCGAATGGAATACTCATTGATGGTGGTAGCCAGATAGTAAAAGTTCAAGGGCATGCTGATGGTACAACGATAAATAAGTCTGGCTCTCAGGACGTAGTACAAGGAAGTCTGGCAACGAACACAACCATAAATGGTGGTCGACAGTATGTTGAACAGAGCACAGTAGAAACAACAACCATTAAAAATGGCGGTGAGCAAAGAGTATATGAGAGCCGTGCGCTGGACACGACGATTGAAGGCGGAACTCAGTCTCTGAATAGTAAGTCAACGGCAAAAAATACGCATATCTATTCTGGTGGCACGCAAATTGTTGATAACACCAGCACCTCGGATGTTATTGAAGTTTATTCTGGTGGCGTGCTTGATGTTAGGGGTGGTACGGCAACAAATGTTACCCAGCACGATGGTGCAATTTTAAAAACTAACACTAACGGTACGACGGTGAGCGGTACGAATAGTGAAGGTGCATTCTCCATCCACAATCACGTGGCAGACAATGTGTTGCTGGAAAACGGTGGTCATTTAGACATAAACGCATATGGTTCGGCAAACAAGACGATTATTAAAGATAAAGGAACAATGTCAGTTTTAACCAATGCTAAAGCTGATGCGACCCGAATAGATAATGGCGGGGTTATGGATGTTGCAGGAAACGCGACAAATACCATAATTAATGGTGGCACACAGAATATTAATAATTATGGCATAGCCACAGGCACCAATATCAACAGCGGAACGCAAAATATCAAAAGCGGCGGGAAAGCTGACACAACAATTATATCCTCCGGGAGCCGGCAGGTTGTTGAGAAAGATGGTACGGCAATTGGCAGCAATATTAGCGCCGGAGGCTCGCTGATTGTCTATACCGGCGGTATTGCACATGGGGTTAACCAGGAGACGGGCAGTGCTTTAGTTGCCAACACGGGTGCAGGGACTGATATCGAAGGATACAACAAGCTCTCTCACTTCACTATTACCGGAGGGGAGGCTAATTATGTTGTGCTGGAAAATACCGGCGAACTGACGGTAGTGGCTAAAACCTCGGCGAAAAATACTACCATTGATACTGGCGGTAAGCTGATTGTCCAGAAGGAGGCTAAAACAGATAGCACCAGACTTAATAATGGCGGCGTTCTGGAGGTTCAGGACGGTGGTGAGGCTAAGCATGTTGAGCAACAATCCGGCGGCGCATTAATTGCTTCCACGACCTCCGGAACACTTATCGAAGGAACCAACAGTTATGGTGATGCTTTCTACATCAGGAATTCAGAAGCTAAAAATGTAGTGCTGGAAAACGCTGGCTCATTAACAGTCGTCACTGGTTCCCGCGCAGTTGACACGATTATTAATGCCAACGGCAAAATGGATGTTTATGGAAAAGATGTTGGCACTGTACTCAATAGTGCTGGCACCCAAACAATATATGCCAGTGCCACTTCTGATAAAGCAAATATCAAAGGTGGCAAGCAAACGGTATATGGTTTAGCCACTGAAGCAAATATCGAAAGTGGTGAACAAATTGTTGATGGTGGGTCAACAGAGAAAACACACATCAATGGTGGCACGCAAACCGTTCAGAATTATGGTAAGGCAATCAATACCGATATCGTCTCTGGCCTACAACAAATTATGGCAAACGGGACAGCGGAAGGTTCCATTATTAATGGGGGTTCACAGGTAGTTAATGAGGGCGGCCTGGCTGAAAACTCGGTGCTTAATGACGGCGGCACACTCGATGTGCGGGAGAAAGGCAGCGCAACGGGGATACAGCAGAGTAGCCAGGGCGCTTTGGTTGCAACCACCAGGGCGACGCGGGTCACAGGAACACGCGCGGATGGCGTCGCGTTCAGCATCGAGCAGGGTGCGGCGAACAATATCCTGCTGGCAAATGGCGGCGTGTTAACCGTGGAGTCAGACACCTCTTCTGACAAAACACAGGTCAATATGGGCGGACGGGAGATCGTCAAAACAAAAGCCACTGCGACAGGCACGACGCTCACCGGCGGTGAACAAATTGTCGAGGGTGTGGCGAATGAGACAACAATTAACGACGGCGGAATACAAACAGTTTCAGCTAACGGAGAGGCAATAAAAACAAAGATCAATGAAGGCGGTACGCTGACAGTCAACGATAATGGCAAAGCGACAGATATCGTCCAGAACAGCGGTGCCGCTCTCCAGACGAGCACGGCTAACGGTATTGAAATCAGCGGTACTCACCAGTACGGTACTTTTTCCATTTCCGGCAATTTAGCGACCAATATGTTGCTGGAAAATGGCGGTAATTTATTGGTATTAGCAGGTACCGAAGCTCGCGACTCCACGGTTGGCAAGGGTGGGGCAATGCAAAACCTGGGTCAGGACTCCGCCACAAAGGTTAACTCTGGCGGGCAATATACCCTTGGGCGGTCAAAAGATGAGTTTCAGGCTCTGGCCCGGGCAGAAGATCTCCAGGTCGCTGGCGGTACGGCAATCGTCTACGCAGGTACGCTGGCGGATGCATCGGTCAGTGGCGCGACAGGAAGCCTGTCGTTAATGACGCCACGGGATAATGTTACGCCAGTTAAACTCGAAGGGGCGGTCCGGATTACCGATAGCGCGACATTGACTCTGGGAAATGGCGTCGATACCACGCTTGCCGACCTGACGGCTGCCAGCCGGGGCAGTGTCTGGCTTAACAGCAATAATTCCTGTGCAGGTACCAGCAACTGCGAATATAGAGTAAACAGTTTGCTACTCAACGACGGTGATGTTTATTTGTCAGCACAAACAGCAGCGCCTGCCACAACTAACGGTATCTACAATACGCTGACAACCAATGAACTTTCCGGTAGCGGTAATTTCTACCTGCATACCAACGTTGCAGGCTCCCGGGGCGATCAACTGGTCGTCAACAACAACGCCACTGGTAATTTTAAAATCTTTGTTCAGGATACCGGCGTCAGCCCACAGTCTGACGACGCGATGACGCTGGTGAAAACAGGGGGAGGGGATGCTTCGTTTACGCTGGGCAATACCGGCGGTTTCGTTGATCTTGGGACCTATGAGTATGTCCTGAAAAGTGACGGCAACAGCAACTGGAACCTGACCAATGATGTCAAACCCAACCCGGACCCCATCCCAAATCCAAAGCCAGACCCAAAACCCGATCCAAAGCCAGACCCAAATCCAAAACCAGACCCTACTCCCGATCCAACGCCGACACCCGTTCCGGAGAAACGCATTACGCCTTCTACGGCAGCCGTACTCAATATGGCAGCAACATTACCGTTGGTATTTGATGCTGAGCTAAACAGTATTCGCGAGCGGTTGAACATAATGAAAGCGAGTCCACACAACAATAATGTCTGGGGGGCGACGTATAACACCCGTAATAATGTCACCACCGATGCGGGTGCCGGGTTTGAGCAGACGCTGACCGGAATGACAGTGGGGATCGACAGCCGTAATGATATTCCTGAAGGAATTACCACGCTAGGCGCTTTTATGGGCTATTCCCATTCACATATCGGTTTTGATCGCGGAGGACATGGCAGTGTGGGCAGTTATTCTCTGGGCGGCTATGCCAGTTGGGAACATGAAAGTGGTTTCTATCTGGACGGTGTCGTGAAGCTGAACCGTTTTAAAAGTAACGTAGCAGGTAAAATGAGCAGCGGTGGAGCCGCCAATGGCAGTTACCACAGCAACGGGCTGGGCGGTCACATTGAAACCGGGATGCGATTTACCGATGGTAACTGGAACCTGACGCCGTATGCATCGTTAACGGGGTTCACCGCTGATAACCCCGAATATCATTTATCCAATGGCATGAAATCGAAATCAGTCGATACCCGCAGTATATATCGTGAACTGGGCGCAACGCTGAGTTACAACATGCGTCTGGGGAACGGTATGGAAGTTGAGCCGTGGCTGAAGGCGGCTGTGCGCAAAGAATTTGTCGATGATAACCGGGTGAAAGTGAATAGTGACGGTAATTTCGTCAATTATTTGTCGGGCAGACGTGGAATATACCAGGCAGGTATTAAAGCCTCATTCAGCAGTACGTTAAGCGGGCATCTTGGGGTGGGGTATAGCCATAGTGCCGGTGTGGAATCCCCGTGGAACGCGGTAGCTGGTGTGAACTGGTCGTTCTGA", - "dna_sequence_length": 4581, - "functions": [ - "adhesin-like autotransporter" - ], - "id": "CDS_2624", - "location": [ - [ - "NC_000913", - 2782726, - "-", - 4581 - ] - ], - "md5": "b08a8daa44b18b1917a41ec6d621d7b2", - "parent_gene": "", - "protein_md5": "780656db6b4a9033a93ff596d68cff87", - "protein_translation": "MNRTSPYYCRRSVLSLLISALIYAPPGMAAFTTNVIGVVNDETVDGNQKVDERGTTNNTHIINHGQQNVHGGVSNGSLIESGGYQDIGSHNNFVGQANNTTINGGRQSIHDGGISTGTTIESGNQDVYKGGISNGTTIKGGASRVEGGSANGILIDGGSQIVKVQGHADGTTINKSGSQDVVQGSLATNTTINGGRQYVEQSTVETTTIKNGGEQRVYESRALDTTIEGGTQSLNSKSTAKNTHIYSGGTQIVDNTSTSDVIEVYSGGVLDVRGGTATNVTQHDGAILKTNTNGTTVSGTNSEGAFSIHNHVADNVLLENGGHLDINAYGSANKTIIKDKGTMSVLTNAKADATRIDNGGVMDVAGNATNTIINGGTQNINNYGIATGTNINSGTQNIKSGGKADTTIISSGSRQVVEKDGTAIGSNISAGGSLIVYTGGIAHGVNQETGSALVANTGAGTDIEGYNKLSHFTITGGEANYVVLENTGELTVVAKTSAKNTTIDTGGKLIVQKEAKTDSTRLNNGGVLEVQDGGEAKHVEQQSGGALIASTTSGTLIEGTNSYGDAFYIRNSEAKNVVLENAGSLTVVTGSRAVDTIINANGKMDVYGKDVGTVLNSAGTQTIYASATSDKANIKGGKQTVYGLATEANIESGEQIVDGGSTEKTHINGGTQTVQNYGKAINTDIVSGLQQIMANGTAEGSIINGGSQVVNEGGLAENSVLNDGGTLDVREKGSATGIQQSSQGALVATTRATRVTGTRADGVAFSIEQGAANNILLANGGVLTVESDTSSDKTQVNMGGREIVKTKATATGTTLTGGEQIVEGVANETTINDGGIQTVSANGEAIKTKINEGGTLTVNDNGKATDIVQNSGAALQTSTANGIEISGTHQYGTFSISGNLATNMLLENGGNLLVLAGTEARDSTVGKGGAMQNLGQDSATKVNSGGQYTLGRSKDEFQALARAEDLQVAGGTAIVYAGTLADASVSGATGSLSLMTPRDNVTPVKLEGAVRITDSATLTLGNGVDTTLADLTAASRGSVWLNSNNSCAGTSNCEYRVNSLLLNDGDVYLSAQTAAPATTNGIYNTLTTNELSGSGNFYLHTNVAGSRGDQLVVNNNATGNFKIFVQDTGVSPQSDDAMTLVKTGGGDASFTLGNTGGFVDLGTYEYVLKSDGNSNWNLTNDVKPNPDPIPNPKPDPKPDPKPDPNPKPDPTPDPTPTPVPEKRITPSTAAVLNMAATLPLVFDAELNSIRERLNIMKASPHNNNVWGATYNTRNNVTTDAGAGFEQTLTGMTVGIDSRNDIPEGITTLGAFMGYSHSHIGFDRGGHGSVGSYSLGGYASWEHESGFYLDGVVKLNRFKSNVAGKMSSGGAANGSYHSNGLGGHIETGMRFTDGNWNLTPYASLTGFTADNPEYHLSNGMKSKSVDTRSIYRELGATLSYNMRLGNGMEVEPWLKAAVRKEFVDDNRVKVNSDGNFVNYLSGRRGIYQAGIKASFSSTLSGHLGVGYSHSAGVESPWNAVAGVNWSF", - "protein_translation_length": 1526, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "pinH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76611" - ], - [ - "gene_synonym", - "GeneID:947250" - ], - [ - "gene_synonym", - "ECK2645" - ], - [ - "gene_synonym", - "JW5423" - ], - [ - "gene_synonym", - "ypjG" - ], - [ - "gene_synonym", - "b2648" - ], - [ - "gene_synonym", - "ASAP:ABE-0008721" - ], - [ - "gene_synonym", - "EcoGene:EG14310" - ] - ], - "dna_sequence": "AACCGTGGCAGGAGGTCCGGACTGAAAAAACTGGTCAGGACATCATCGGCAGGGAACGCACTGCTAGTCTGTAAACTGAACCGACTGGGGCGCAGTATGTGGCATCTTGTCGTGCTGTTGGAGGAGCTGTGCGAACGTGGTATTAACTTTCGTGCTCTGGCCCAATCTATATTTGCCCAACAATGGGGGGACGAATGCTGTAAAAGTAAAACAATCTGCGATCTCAAAGTTATTGTGTGA", - "dna_sequence_length": 240, - "id": "CDS_2625", - "location": [ - [ - "NC_000913", - 2783304, - "-", - 240 - ] - ], - "md5": "5f1869ab28a278b4b46bff3a8f8da852", - "parent_gene": "", - "protein_md5": "67922a6fbb072b91adcaa9ba0f46af57", - "protein_translation": "NRGRRSGLKKLVRTSSAGNALLVCKLNRLGRSMWHLVVLLEELCERGINFRALAQSIFAQQWGDECCKSKTICDLKVIV", - "protein_translation_length": 79, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2629" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76613" - ], - [ - "gene_synonym", - "GeneID:947640" - ], - [ - "gene_synonym", - "ECK2646" - ], - [ - "gene_synonym", - "b2650" - ], - [ - "gene_synonym", - "ypjC" - ], - [ - "gene_synonym", - "ypjB" - ], - [ - "gene_synonym", - "EcoGene:EG13519" - ], - [ - "gene_synonym", - "ASAP:ABE-0008724" - ], - [ - "gene_synonym", - "ASAP:ABE-0008727" - ] - ], - "dna_sequence": "ATGTTAGTTAGTAAAAGCAACGGATTTAACGCTAGCGCAGTTTTGGGTAGTGGAAGTTATAATGAAAATAAATCTTCTAAACACATGGAGCTACTAGCTCATAGTATTTTAAAATTAATTTGTAAGGAAGCTGCATCAGAGACGTATCGCGGTGCTCTTGAAACTTTACAAAAAATGATGTCTGAATGTATATATCAAGAAGGCAACGCCTTTGTCATTATGGGAGCTGGAGAACAATTAAAACGTATTAAATATGAAGTTGGTGAAAATAACTTAAAGGTATTCAACGTACACTTTAATAATAATCACGAGTTAGTTAGTTCTGGTGAGCCTGACGTAATATGTTTAAGCAAGCAGGTCTGGGAAAATCTTCTCATTAAACTAAAGCTGGAAAACAATGAAAATGTGTTTTCTGAAACTAAAAAATTATCGAATAAAAATAATGCCGATCAGTTTTTTGAATGCGCTAAAAGAAATGAATAGAACCTTTTCGATAATATAAGAAAAAGTGATTTTCATGTTGGTTTACTTAAGCCAAGTAGTACGCGTAGTGTTATTTTAGAAACGCCGCCAAATGTCTGTATGGAATCACGTAATTCATATGAAAACAAAATAGATGAGATTTCATCTTTGTCAGAGTCAAAGGAACACCCCATAGATATTCAAGAAAAAAAAGATGCGTTTGTGAATGAGTTCAAGGGGGTATTATTTGATAAAAATACAAGGTCTTCAGAGCTTCTGTTTAATTTTTATGAGTGTTGCTATAAGTTTTTACCAAGAGCTCAGCCTCAAGATAAAATCGATAGCTATAATTCAGCACTGCAAGCTTTTTCCATTTTTTGTTCATCTACGTTGACACATAATAATATAGGCTTTGATTTCAAATTATTTCCTGAAGTCAAGCTGTCTGGAGAACATCTTGAAACGGTATTCAAATACAAAAATGGCGATGATGTCCGGGAGATAGCCAAAATTAACATTACTCTCCAAAAAGAAGAGGGTGGTTTATATAATTTACGTGGATTGGATTTTAAGGGGTGCTTCTTTTCTGGACAGAACTTCAGTAACTATGATATTCAATATGTGAACTGGGGAACGTCATTGTTTGATGTTGATACTCCGTGTATTTTTAATGCGCCTGCTTACAACAAGAGTAATGAAAAATCATTAAAACCTGTGAGCGAAAACGGTTTAAGTGGAGTATTGACTGATCGTAATAATAAAATAAAACTCATCACGGGCGTGGCACCATTCGATGATATTTTATTTATGGATGATGACTTTGATGATAGTTCCTCTGAGGATGATCCCGTTGAGAATAGTCCTGTTGTGACTAGTCCCGTTGTATCAAGTTCTAAAAGCAGTTTTCAATGA", - "dna_sequence_length": 1374, - "id": "CDS_2626", - "location": [ - [ - "NC_000913", - 2785011, - "-", - 1374 - ] - ], - "md5": "c899c4a0f063ce376ac1c677a845f8f0", - "parent_gene": "", - "protein_md5": "99720b29b6e187376d41c1efe404450d", - "protein_translation": "MLVSKSNGFNASAVLGSGSYNENKSSKHMELLAHSILKLICKEAASETYRGALETLQKMMSECIYQEGNAFVIMGAGEQLKRIKYEVGENNLKVFNVHFNNNHELVSSGEPDVICLSKQVWENLLIKLKLENNENVFSETKKLSNKNNADQFFECAKRNE", - "protein_translation_length": 160, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0174112" - ], - [ - "gene_synonym", - "ECK2649" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76616" - ], - [ - "gene_synonym", - "EcoGene:EG13520" - ], - [ - "gene_synonym", - "b4462" - ], - [ - "gene_synonym", - "yqaC" - ], - [ - "gene_synonym", - "JW5425" - ], - [ - "gene_synonym", - "yqaD" - ], - [ - "gene_synonym", - "GeneID:2847762" - ], - [ - "gene_synonym", - "ASAP:ABE-0008747" - ], - [ - "gene_synonym", - "ygaR" - ], - [ - "gene_synonym", - "ygaQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0008751" - ], - [ - "gene_synonym", - "ASAP:ABE-0008739" - ] - ], - "dna_sequence": "ATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCTTGTGGAGTTTACCCTCAAGGATTAAAAGACAGAGAAATTATATCAACTTTTCACGCAGAAAAAGTTATTAATGATCTGTTAAAAAACGATTATAAAATTTCCCTTTCTCCAGATACAACTTACCGAGAGTTGAATAAAGCAGCACAGCGTAGCATTACAGCGCCAGACAGGATAGGAGAAAGAAAAACATAGGTTTATCAACGAGATACAATGATTGAAAGAGGTGATAACAGCGGTGTTTATCAGTATGGTCGTGCTGAACATTTCACCCACATTATATCTGACAAACCTTCCCCAAAAGATAAATATGTTGCATATGCTATTAACATTCCTGACTATGAGCTGGCAGCCGATGTATATAATATTAACGTGACGTCACCTTCCGGACAGCAAGAAACATTTAAAATATTAATCAATCTAGAACATCTACGGCAAACACTTGAACGTAAATCTCTTACTGCTGTTCAGAAATCACAATGTGAAATCATCACCCCCAAAAAACCTGGCGAAGCGATTCTTCATGCTTTTAATGCCACCTACCAGCAGATCAGAGAAAATATGTCTGAATTTGCACGTTGCCATTATGGGTATATACAAATCCCTCCAGTGACAACTTTCCGCGCCGACGGACCAGAAACTCCCGAAGAAGAAAAGGGTTACTGGTTTCATGCTTATCAACCCGAAGATCTTTGTACCATCCATAATCCAATGGGAGATTTGCAGGATTTTATTGCATTGGTTAAAGATGCTAAAAAATTTGGTATCGATATCATTCCTGATTATACCTTTAACTTTATGGGAATTGGGGGTAGTGGTAAAAATGACCTGGATTATCCCTCTGCTGATATACGAGCGAAGATCAGTAAAGATATAGAAGGTGGTATCCCTGGCTATTAGCAAGGTCAGGTTTTGATTCCATTCATTAAAGATCCAGTAACAAAAGAACGTAAACAAATCCATCCAGAAGATATACATCTCACTGCAAAAGACTTCGAAGCAAGTAAAGATAACATCTCTAAGGATGAATGGGAAAACCTCCATGCATTAAAAGAAAAGCGTTTAAATGGAATGCCTAAAACAACACCCAAAAGTGACCAGGTTATTATGTTGCAAAATCAATACGTTCGTGAAATGCGAAAATATGGCGTACGAGGTTTACGTTATGATGCGGCAAAACACTCAAAACATGAACAAATAGAAAGATCAATAACCCCACCGCTTAAAAATTATAATGAGCGGTTACACAATACTAACTTATTTAACCCAAAATATCATAAAAAAGCCGTTATGAATTACATGGAATATCTGGTAACTTGTCAGTTGGATGAACAACAAATGTCATCACTGCTTTATGAAAGAGATGATTTAAGCGCCATTGATTTTTCATTGCTCATGAAAACGATAAAAGCCTTTTCATTTGGTGGAGATCTTCAAACCCTTGCATCAAAACCGGGTTCCACAATCTCAAGTATCCCATCAGAAAGACGGATATTGATTAACATTAACCACGATTTTCCTAACAATGGTAATCTTTTCAATGACTTTCTATTTAACCATCAACAAGATGAACAATTAGCAATGGCATATATAGCCGCTCTGCCGTTCAGCAGGCCTTTAGTTTACTGGGATGGCCAAGTATTAAAATCAACGACTGAAATTAAAAATTATGATGGGTCCACGCGTGTCGGCGGTGAGGCGTAGCTTAATAAAGGTTGCTCTACCTATCAGCAGCTCTACAATGAATTCCACGCATTATATATAGATAAAGCAGGAATATGGAGCGCATTTGAGGGTGTATCTGCAACTAAAAACGTTCTGGCCTTTAGTCGTGGGGATTCTGTGAACATTAATCACTCTCCTCATGATGGACTAGTTATAATAAATAAAGGAAACGAAGAAGTTGAAGGTACCTGGCCTAACAAATTGCAACCTGGAATATACAAAAACATGGGGAGTAATAGCGTTAACATTATTATTAATAATACCCGAAAAATTATCCCCCCTGGTAAAGTATTTACGCTTAGAGGCGGAACTCTAAATATCAATATTCCTGGGCGTAGCGCTCTTCTTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAA", - "dna_sequence_length": 2253, - "id": "CDS_2627", - "location": [ - [ - "NC_000913", - 2786397, - "+", - 2253 - ] - ], - "md5": "cc45c6e0252c1fdf82d968ac2ca0c4a7", - "parent_gene": "", - "protein_md5": "befaac22accb26ff95870f362057c512", - "protein_translation": "MFSIKPGPRNLPIDNPTLLSWNITDGDLNSKLNTLEYLNCITNIINSCGVYPQGLKDREIISTFHAEKVINDLLKNDYKISLSPDTTYRELNKAAQRSITAPDRIGERKT", - "protein_translation_length": 110, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417145.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76621" - ], - [ - "gene_synonym", - "ECK2653" - ], - [ - "gene_synonym", - "JW5427" - ], - [ - "gene_synonym", - "ASAP:ABE-0008754" - ], - [ - "gene_synonym", - "csiD" - ], - [ - "gene_synonym", - "EcoGene:EG13523" - ], - [ - "gene_synonym", - "GI:90111476" - ], - [ - "gene_synonym", - "GeneID:948076" - ], - [ - "gene_synonym", - "ygaT" - ], - [ - "gene_synonym", - "b2659" - ], - [ - "gene_synonym", - "csi-12" - ] - ], - "dna_sequence": "ATGAATGCACTGACCGCCGTACAAAATAACGCTGTCGATTCAGGCCAGGACTATAGCGGATTCACCCTCACCCCGTCGGCGCAATCCCCGCGTCTGCTGGAACTCACCTTCACCGAACAGACGACCAAACAGTTTCTTGAGCAGGTTGCCGAGTGGCCCGTGCAGGCGCTGGAGTACAAATCGTTTCTGCGTTTTCGGGTAGCCAAAATTCTTGACGATCTATGTGCGAACCAGCTGCAACCATTGCTGTTGAAGACGTTGCTAAACCGCGCTGAAGGTGCGTTGTTGATCAATGCGGTGGGTGTCGATGATGTGAAGCAAGCGGATGAGATGGTGAAGCTGGCGACGGCGGTGGCGCATCTGATTGGCCGTTCCAATTTCGATGCGATGAGCGGTCAGTATTACGCGCGTTTTGTAGTGAAAAATGTCGATAACTCAGACAGCTATCTGCGCCAGCCGCACCGCGTGATGGAGCTACACAACGACGGCACGTATGTCGAAGAGATAACCGATTACGTGCTGATGATGAAAATCGACGAGCAAAACATGCAGGGCGGAAATTCGCTGCTGCTGCATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATGCGCTATATCGACCAGTTCGTCCAGCCGAAAGACTTCGAAGAAGGCGTGTGGTTGAGCGAGCTTTCCGACGCCATTGAAACCAGCAAAGGCATTCTTTCTGTGCCCGTTCCCGTTGGCAAATTCCTGTTGATTAACAACCTGTTCTGGCTGCACGGTCGCGACCGCTTTACTCCGCACCCGGATCTGCGCCGTGAACTGATGCGCCAGCGTGGCTATTTCGCTTACGCCTCTAACCACTACCAGACGCATCAGTAA", - "dna_sequence_length": 978, - "functions": [ - "carbon starvation protein" - ], - "id": "CDS_2628", - "location": [ - [ - "NC_000913", - 2788985, - "+", - 978 - ] - ], - "md5": "a4b4192ed2203fd385a68bcb0ab88778", - "parent_gene": "", - "protein_md5": "f98e30ebc82a2a04211ed351d35630ae", - "protein_translation": "MNALTAVQNNAVDSGQDYSGFTLTPSAQSPRLLELTFTEQTTKQFLEQVAEWPVQALEYKSFLRFRVAKILDDLCANQLQPLLLKTLLNRAEGALLINAVGVDDVKQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELHNDGTYVEEITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDNYFRHPLARRPMRFAAPPSKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVPVPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYASNHYQTHQ", - "protein_translation_length": 325, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "lhgO" - ], - [ - "gene_synonym", - "EcoGene:EG12387" - ], - [ - "gene_synonym", - "NP_417146.2" - ], - [ - "gene_synonym", - "ygaF" - ], - [ - "gene_synonym", - "JW2635" - ], - [ - "gene_synonym", - "GeneID:948069" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37339" - ], - [ - "gene_synonym", - "GI:90111477" - ], - [ - "gene_synonym", - "ASAP:ABE-0008756" - ], - [ - "gene_synonym", - "ECK2654" - ], - [ - "gene_synonym", - "b2660" - ] - ], - "dna_sequence": "ATGTATGATTTTGTGATTATTGGCGGCGGCATCATCGGCATGTCGACCGCCATGCAACTGATTGATGTCTATCCGGACGCCCGCATTGCGTTGCTGGAAAAAGAGTCCGCCCCGGCCTGTCACCAGACGGGCCACAACAGCGGCGTGATCCATGCCGGGGTCTATTACACGCCCGGCAGCCTGAAGGCGCAGTTTTGCCTGGCGGGAAACCGCGCCACCAAAGCCTTTTGCGATCAAAACGGCATTCGCTACGACAACTGCGGCAAGATGCTGGTTGCCACGTCCGATCTCGAAATGGAACGGATGCGCGCCTTATGGGAACGCACAGCGGCGAACGGTATCGAGCGCGAATGGCTTAACGCCGACGAACTGCGCGAGCGCGAACCGAATATCACCGGGCTCGGCGGCATTTTTGTGCCGTCCAGCGGCATTGTCAGCTACCGCGACGTGACGGCGGCGATGGCAAAAATCTTCCAGTCCAGAGGCGGTGAAATTATCTATAACGCCGAAGTCAGCGGGCTTAATGAGCATAAAAACGGCGTGGTGATACGTACCCGTCAGGGCGGCGAATATGAAGCATCAACGCTGATTAGCTGTTCCGGGCTGATGGCTGACCGGCTGGTGAAAATGCTCGGACTCGAACCGGGCTTTATCATCTGCCCGTTCCGTGGCGAGTATTTCCGCCTTGCGCCGGAGCATAACCAGATTGTTAACCACCTGATTTACCCCATTCCCGACCCGGCAATGCCGTTTTTGGGCGTTCATCTCACCCGCATGATCGACGGCAGCGTGACCGTCGGGCCAAACGCGGTGCTGGCTTTCAAACGCGAAGGCTATCGCAAGCGCGACTTCTCATTTAGCGACACGCTGGAGATTTTGGGCTCGTCGGGGATTCGCCGGGTGCTGCAAAACCATCTACGCTCAGGACTGGGCGAGATGAAAAACTCGCTGTGCAAAAGCGGCTATCTGCGGCTGGTGCAAAAGTATTGTCCCCGGCTTTCGTTAAGCGATCTCCAGCCCTGGCCCGCCGGTGTGCGGGCGCAGGCGGTATCGCCGGACGGCAAGCTGATTGACGATTTTCTGTTTGTCACCACCCCGCGCACGATCCACACCTGCAATGCGCCCTCCCCGGCAGCGACATCAGCAATTCCTATTGGTGCGCATATTGTCAGCAAGGTACAAACGCTGTTGGCAAGCCAGAGTAACCCCGGACGCACGCTGCGAGCGGCACGTAGTGTGGATGCCTTACACGCCGCATTTAATCAATAA", - "dna_sequence_length": 1269, - "functions": [ - "L-2-hydroxyglutarate oxidase" - ], - "id": "CDS_2629", - "location": [ - [ - "NC_000913", - 2789982, - "+", - 1269 - ] - ], - "md5": "34c3f7d26facbc3852e456ed2d4a3e50", - "parent_gene": "", - "protein_md5": "22b539cf4765825aa8119d1db89d6994", - "protein_translation": "MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNGIRYDNCGKMLVATSDLEMERMRALWERTAANGIEREWLNADELREREPNITGLGGIFVPSSGIVSYRDVTAAMAKIFQSRGGEIIYNAEVSGLNEHKNGVVIRTRQGGEYEASTLISCSGLMADRLVKMLGLEPGFIICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSFSDTLEILGSSGIRRVLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLSLSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIHTCNAPSPAATSAIPIGAHIVSKVQTLLASQSNPGRTLRAARSVDALHAAFNQ", - "protein_translation_length": 422, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25526" - ], - [ - "gene_synonym", - "b2661" - ], - [ - "gene_synonym", - "JW2636" - ], - [ - "gene_synonym", - "ECK2655" - ], - [ - "gene_synonym", - "ASAP:ABE-0008758" - ], - [ - "gene_synonym", - "GeneID:948060" - ], - [ - "gene_synonym", - "NP_417147.1" - ], - [ - "gene_synonym", - "gabD" - ], - [ - "gene_synonym", - "EcoGene:EG11329" - ], - [ - "gene_synonym", - "GI:16130575" - ] - ], - "dna_sequence": "ATGAAACTTAACGACAGTAACTTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGTGAAGCCATCGACGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTGCCGAAAATGGGCGCGGATGAAACCCGCGCCGCTATCGACGCCGCCAACCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAACGCGCCACCATTCTGCGCAACTGGTTCAATTTGATGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTCGAACAGGGTAAACCACTGGCCGAAGCGAAAGGCGAAATCAGCTACGCCGCCTCCTTTATTGAGTGGTTTGCCGAAGAAGGCAAACGCATTTATGGCGACACCATTCCTGGTCATCAGGCCGATAAACGCCTGATTGTTATCAAGCAGCCGATTGGCGTCACCGCGGCTATCACGCCGTGGAACTTCCCGGCGGCGATGATTACCCGCAAAGCCGGTCCGGCGCTGGCAGCAGGCTGCACCATGGTGCTGAAGCCCGCCAGTCAGACGCCGTTCTCTGCGCTGGCGCTGGCGGAGCTGGCGATCCGCGCGGGCGTTCCGGCTGGGGTATTTAACGTGGTCACCGGTTCGGCGGGCGCGGTCGGTAACGAACTGACCAGTAACCCGCTGGTGCGCAAACTGTCGTTTACCGGTTCGACCGAAATTGGCCGCCAGTTAATGGAACAGTGCGCGAAAGACATCAAGAAAGTGTCGCTGGAGCTGGGCGGTAACGCGCCGTTTATCGTCTTTGACGATGCCGACCTCGACAAAGCCGTGGAAGGCGCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACCTGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCGAAAGAAGAGACGTTCGGCCCCCTCGCCCCGCTGTTCCGCTTTAAAGATGAAGCTGATGTGATTGCGCAAGCCAATGACACCGAGTTTGGCCTTGCCGCCTATTTCTACGCCCGTGATTTAAGCCGCGTCTTCCGCGTGGGCGAAGCGCTGGAGTACGGCATCGTCGGCATCAATACCGGCATTATTTCCAATGAAGTGGCCCCGTTCGGCGGCATCAAAGCCTCGGGTCTGGGTCGTGAAGGTTCGAAGTATGGCATCGAAGATTACTTAGAAATCAAATATATGTGCATCGGTCTTTAA", - "dna_sequence_length": 1449, - "functions": [ - "succinate-semialdehyde dehydrogenase I, NADP-dependent" - ], - "id": "CDS_2630", - "location": [ - [ - "NC_000913", - 2791273, - "+", - 1449 - ] - ], - "md5": "6cfe9f7509d4ceadfe00e8ccbc32c2e4", - "parent_gene": "", - "protein_md5": "52a834ce1be022e0b9df5ff1b3364874", - "protein_translation": "MKLNDSNLFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL", - "protein_translation_length": 482, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008760" - ], - [ - "gene_synonym", - "gabT" - ], - [ - "gene_synonym", - "JW2637" - ], - [ - "gene_synonym", - "ECK2656" - ], - [ - "gene_synonym", - "EcoGene:EG10361" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P22256" - ], - [ - "gene_synonym", - "b2662" - ], - [ - "gene_synonym", - "NP_417148.1" - ], - [ - "gene_synonym", - "GeneID:948067" - ], - [ - "gene_synonym", - "GI:16130576" - ] - ], - "dna_sequence": "ATGAACAGCAATAAAGAGTTAATGCAGCGCCGCAGTCAGGCGATTCCCCGTGGCGTTGGGCAAATTCACCCGATTTTCGCTGACCGCGCGGAAAACTGCCGGGTGTGGGACGTTGAAGGCCGTGAGTATCTTGATTTCGCGGGCGGGATTGCGGTGCTCAATACCGGGCACCTGCATCCGAAGGTGGTGGCCGCGGTGGAAGCGCAGTTGAAAAAACTGTCGCACACCTGCTTCCAGGTGCTGGCTTACGAGCCGTATCTGGAGCTGTGCGAGATTATGAATCAGAAGGTGCCGGGCGATTTCGCCAAGAAAACGCTGCTGGTTACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTGAATCCGTACTCTGCGGGCATGGGGCTGATGCCGGGTCATGTTTATCGCGCGCTTTATCCTTGCCCGCTGCACGGCATAAGCGAGGATGACGCTATCGCCAGCATCCACCGGATCTTCAAAAATGATGCCGCGCCGGAAGATATCGCCGCCATCGTGATTGAGCCGGTTCAGGGCGAAGGCGGTTTCTACGCCTCGTCGCCAGCCTTTATGCAGCGTTTACGCGCTCTGTGTGACGAGCACGGGATCATGCTGATTGCCGATGAAGTGCAGAGCGGCGCGGGGCGTACCGGCACGCTGTTTGCGATGGAGCAGATGGGCGTTGCGCCGGATCTTACCACCTTTGCGAAATCGATCGCGGGCGGCTTCCCGCTGGCGGGCGTCACCGGGCGCGCGGAAGTAATGGATGCCGTCGCTCCAGGCGGTCTGGGCGGCACCTATGCGGGTAACCCGATTGCCTGCGTGGCTGCGCTGGAAGTGTTGAAGGTGTTTGAGCAGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGACGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCATTGAAGACGCTCAGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAG", - "dna_sequence_length": 1281, - "functions": [ - "4-aminobutyrate aminotransferase, PLP-dependent" - ], - "id": "CDS_2631", - "location": [ - [ - "NC_000913", - 2792735, - "+", - 1281 - ] - ], - "md5": "c0f65fdc65ed8a5f9b0c0ea8560bc7c6", - "parent_gene": "", - "protein_md5": "81c0dd1a7823ed99a23cd0ae419b6e0f", - "protein_translation": "MNSNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFDEAKQ", - "protein_translation_length": 426, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11330" - ], - [ - "gene_synonym", - "JW2638" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25527" - ], - [ - "gene_synonym", - "ASAP:ABE-0008763" - ], - [ - "gene_synonym", - "ECK2657" - ], - [ - "gene_synonym", - "b2663" - ], - [ - "gene_synonym", - "gabP" - ], - [ - "gene_synonym", - "GeneID:948049" - ], - [ - "gene_synonym", - "NP_417149.1" - ], - [ - "gene_synonym", - "GI:16130577" - ] - ], - "dna_sequence": "ATGGGGCAATCATCGCAACCACATGAGTTAGGCGGCGGGCTGAAGTCACGCCACGTCACCATGTTGTCTATTGCCGGTGTTATCGGCGCAAGTCTGTTTGTCGGTTCCAGCGTCGCCATCGCCGAAGCGGGCCCGGCGGTATTACTGGCCTATCTGTTCGCCGGGCTACTGGTGGTTATGATTATGCGGATGTTGGCGGAAATGGCGGTTGCCACGCCCGATACCGGTTCGTTTTCCACCTATGCCGATAAAGCCATTGGTCGCTGGGCGGGCTATACCATCGGCTGGTTGTACTGGTGGTTTTGGGTACTGGTTATCCCGCTGGAAGCCAACATCGCCGCCATGATCCTGCACTCATGGGTTCCAGGCATTCCCATCTGGTTATTTTCCCTCGTCATTACCCTCGCCTTAACTGGCAGTAACTTATTAAGCGTTAAAAACTACGGCGAATTTGAGTTCTGGCTGGCGCTGTGCAAAGTCATCGCTATCCTGGCCTTTATTTTCCTTGGTGCAGTCGCAATTAGCGGTTTTTACCCGTATGCCGAAGTGAGCGGGATCTCAAGATTGTGGGATAGCGGCGGCTTTATGCCCAACGGTTTCGGTGCGGTATTAAGCGCGATGTTGATCACCATGTTCTCGTTTATGGGCGCAGAAATTGTCACCATTGCCGCCGCGGAATCCGACACGCCGGAAAAACATATTGTCCGCGCCACCAACTCGGTTATCTGGCGTATTTCTATCTTCTATTTATGTTCTATTTTTGTCGTCGTGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGTAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATTCTTAACGGTGGTGGTGAACTATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCAAAATTCTGCGAGCAGAAGGAAGCGAAATTCGCTTGCGAATGTGGCTTTATCCGTGGCTCACCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATTCCGTCCGGCGCAACAGTTAGAAGTGATCTCCACCGGCTTATTAGCGATAGGGATTATCTGTACCGTGCCAATTATGGCTCGCTGGAAAAAGCTGGTATTGTGGCAAAAAACACCCGTTCATAATACGCGCTGA", 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[ - "gene_synonym", - "csiR" - ], - [ - "gene_synonym", - "b2664" - ], - [ - "gene_synonym", - "EcoGene:EG12386" - ], - [ - "gene_synonym", - "ygaE" - ], - [ - "gene_synonym", - "GeneID:948055" - ], - [ - "gene_synonym", - "ECK2658" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37338" - ], - [ - "gene_synonym", - "NP_417150.4" - ], - [ - "gene_synonym", - "gabC" - ] - ], - "dna_sequence": "ATGACCATTACGTCTCTGGATGGCTATCGCTGGCTGAAGAACGATATTATTCGCGGTAATTTTCAACCGGATGAAAAATTACGAATGAGTTTGCTGACATCGCGTTATGCACTTGGCGTTGGGCCGTTACGGGAAGCTCTTTCGCAACTGGTGGCGGAACGGCTGGTCACGGTGGTGAATCAAAAAGGGTATCGGGTGGCGTCTATGTCAGAGCAGGAGCTGCTCGATATTTTCGACGCCCGCGCCAATATGGAAGCGATGTTAGTGAGTCTGGCGATTGCCCGCGGTGGCGATGAGTGGGAGGCAGACGTTCTCGCAAAAGCGCATCTGCTGAGTAAGCTTGAGGCCTGTGACGCCAGCGAGAAAATGCTTGATGAGTGGGATCTGCGTCATCAGGCGTTTCATACGGCAATTGTGGCGGGCTGTGGTTCTCACTATTTGCTGCAAATGCGTGAACGGTTGTTTGATCTGGCGGCGCGTTATCGATTTATCTGGCTGCGGCGAACGGTGCTTTCGGTGGAAATGCTGGAGGATAAACACGATCAGCACCAGACCCTGACTGCGGCGGTACTGGCGCGAGATACCGCGCGCGCCAGTGAGTTAATGCGCCAGCATTTACTGACGCCAATTCCCATTATCCAGCAGGCGATGGCTGGCAATTAA", - "dna_sequence_length": 663, - "functions": [ - "transcriptional repressor of csiD" - ], - "id": "CDS_2633", - "location": [ - [ - "NC_000913", - 2795674, - "+", - 663 - ] - ], - "md5": "4bf18b961e98f6b5118a8699a0e99512", - "parent_gene": "", - "protein_md5": "0eff3dcdb6f0ee4910cadd8d9338a5eb", - "protein_translation": "MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLREALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGGDEWEADVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMAGN", - "protein_translation_length": 220, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12675" - ], - [ - "gene_synonym", - "ECK2659" - ], - [ - "gene_synonym", - "b2665" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADE6" - ], - [ - "gene_synonym", - "ASAP:ABE-0008767" - ], - [ - "gene_synonym", - "GeneID:947144" - ], - [ - "gene_synonym", - "JW2640" - ], - [ - "gene_synonym", - "GI:16130579" - ], - [ - "gene_synonym", - "yzzM" - ], - [ - "gene_synonym", - "NP_417151.1" - ], - [ - "gene_synonym", - "ygaU" - ] - ], - "dna_sequence": "ATGGGTCTGTTCAATTTTGTGAAAGATGCCGGAGAAAAACTCTGGGACGCGGTTACAGGTCAGCACGATAAAGACGATCAGGCGAAGAAGGTGCAGGAGCATCTGAACAAAACCGGTATACCGGATGCCGATAAAGTGAATATTCAAATTGCCGACGGCAAAGCGACGGTCACTGGTGACGGCCTGAGTCAGGAGGCGAAGGAGAAAATCCTTGTTGCGGTGGGGAATATTTCCGGTATTGCCAGTGTCGATGATCAGGTGAAAACGGCGACACCAGCCACTGCCAGCCAGTTTTATACCGTTAAGTCTGGCGACACTCTGAGTGCCATTTCCAAACAGGTCTACGGTAACGCTAATCTGTACAATAAAATCTTCGAAGCGAATAAACCGATGCTAAAAAGCCCGGATAAAATTTATCCGGGGCAAGTGTTGCGTATTCCGGAAGAGTAG", - "dna_sequence_length": 450, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2634", - "location": [ - [ - "NC_000913", - 2796786, - "-", - 450 - ] - ], - "md5": "d313b8477ebfd976857e1eed0c17277c", - "parent_gene": "", - "protein_md5": "4f563011ab0db0a71851097347585757", - "protein_translation": "MGLFNFVKDAGEKLWDAVTGQHDKDDQAKKVQEHLNKTGIPDADKVNIQIADGKATVTGDGLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVKSGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIPEE", - "protein_translation_length": 149, - "type": "CDS" - }, - { - "aliases": [ - [ 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"+", - 300 - ] - ], - "md5": "2b5aa3a0729678bd4217a9ee7a24ba1a", - "parent_gene": "", - "protein_md5": "22983af105ce88325fc502be2cc0147d", - "protein_translation": "MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP", - "protein_translation_length": 99, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2668" - ], - [ - "gene_synonym", - "GeneID:947135" - ], - [ - "gene_synonym", - "JW2643" - ], - [ - "gene_synonym", - "ASAP:ABE-0008786" - ], - [ - "gene_synonym", - "ECK2662" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P55734" - ], - [ - "gene_synonym", - "GI:16130582" - ], - [ - "gene_synonym", - "NP_417154.1" - ], - [ - "gene_synonym", - "ygaP" - ], - [ - "gene_synonym", - "EcoGene:EG13288" - ] - ], - "dna_sequence": "ATGGCTTTGACAACCATTTCGCCGCATGATGCACAAGAATTAATCGCACGCGGCGCAAAGTTAATCGATATTCGTGATGCTGATGAATATCTTCGTGAACATATTCCTGAAGCAGATCTGGCTCCATTATCCGTGCTGGAACAGTCAGGTCTTCCGGCTAAATTACGTCACGAGCAAATTATATTCCACTGCCAGGCAGGTAAACGCACCAGTAATAATGCCGATAAATTAGCAGCGATTGCCGCCCCCGCAGAAATCTTTTTACTCGAAGATGGGATTGATGGCTGGAAAAAAGCAGGATTGCCAGTAGCGGTAAATAAATCTCAACCCTTGCCGTTAATGCGCCAGGTGCAGATCGCTGCGGGTGGTTTAATATTAATCGGCGTTGTACTGGGTTATACCGTAAATAGCGGTTTCTTCTTATTAAGTGGCTTTGTTGGTGCCGGGTTACTGTTTGCAGGAATCAGCGGTTTTTGTGGAATGGCAAGGTTGTTAGATAAGATGCCGTGGAACCAACGAGCTTGA", - "dna_sequence_length": 525, - "functions": [ - "DUF2892 family inner membrane rhodanese" - ], - "id": "CDS_2637", - "location": [ - [ - "NC_000913", - 2797520, - "+", - 525 - ] - ], - "md5": "1fdcb3fa4f77952c5600a709f1ae6a64", - "parent_gene": "", - "protein_md5": "edf88d4c464f851991fa21c4a3a4d605", - "protein_translation": "MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLSVLEQSGLPAKLRHEQIIFHCQAGKRTSNNADKLAAIAAPAEIFLLEDGIDGWKKAGLPVAVNKSQPLPLMRQVQIAAGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCGMARLLDKMPWNQRA", - "protein_translation_length": 174, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "stpA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACG1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008788" - ], - [ - "gene_synonym", - "b2669" - ], - [ - "gene_synonym", - "EcoGene:EG11554" - ], - [ - "gene_synonym", - "GeneID:947130" - ], - [ - "gene_synonym", - "NP_417155.1" - ], - [ - "gene_synonym", - "JW2644" - ], - [ - "gene_synonym", - "hsm-3" - ], - [ - "gene_synonym", - "ECK2663" - ], - [ - "gene_synonym", - "GI:16130583" - ], - [ - "gene_synonym", - "hnsB" - ], - [ - "gene_synonym", - "rsv" - ] - ], - "dna_sequence": "ATGTCCGTAATGTTACAAAGTTTAAATAACATTCGCACCCTCCGTGCGATGGCTCGCGAATTCTCCATTGACGTTCTTGAAGAAATGCTCGAAAAATTCAGGGTTGTCACTAAAGAAAGACGTGAAGAAGAAGAACAGCAGCAGCGTGAACTGGCAGAGCGCCAGGAAAAAATTAGCACCTGGCTGGAGCTGATGAAAGCTGACGGAATTAACCCGGAAGAGTTATTGGGTAATAGCTCTGCTGCTGCACCACGCGCTGGTAAAAAACGCCAGCCGCGTCCGGCGAAATATAAATTCACCGATGTTAACGGTGAAACTAAAACCTGGACCGGTCAGGGCCGTACACCGAAGCCAATTGCTCAGGCGCTGGCAGAAGGTAAATCTCTCGACGATTTCCTGATCTAA", - "dna_sequence_length": 405, - "functions": [ - "DNA binding protein, nucleoid-associated" - ], - "id": "CDS_2638", - "location": [ - [ - "NC_000913", - 2798495, - "-", - 405 - ] - ], - "md5": "ce63414f7f1386f537404693fb22dd2a", - "parent_gene": "", - "protein_md5": "a8caa264b5687bad9e7a13fb2c1eb459", - "protein_translation": "MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIAQALAEGKSLDDFLI", - "protein_translation_length": 134, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947147" - ], - [ - "gene_synonym", - "alaE" - ], - [ - "gene_synonym", - "JW2645" - ], - [ - "gene_synonym", - "ASAP:ABE-0008793" - ], - [ - "gene_synonym", - "b2670" - ], - [ - "gene_synonym", - "EcoGene:EG13525" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64550" - ], - [ - "gene_synonym", - "GI:16130584" - ], - [ - "gene_synonym", - "ECK2664" - ], - [ - "gene_synonym", - "ygaW" - ], - [ - "gene_synonym", - "NP_417156.1" - ] - ], - "dna_sequence": "ATGTTCTCACCGCAGTCACGCTTGCGTCATGCAGTTGCAGATACGTTCGCGATGGTTGTTTACTGTTCTGTCGTGAACATGTGTATTGAAGTTTTCCTCTCCGGAATGAGCTTCGAACAGTCTTTTTATTCCAGATTGGTAGCGATTCCGGTGAACATCTTAATTGCATGGCCATACGGTATGTACCGTGATCTGTTTATGCGCGCGGCACGCAAAGTTAGCCCGTCGGGCTGGATAAAAAATCTGGCGGATATCCTGGCTTATGTGACGTTCCAGTCACCGGTGTATGTGGCGATCTTGTTAGTGGTGGGCGCAGACTGGCATCAGATTATGGCGGCGGTCAGTTCAAACATCGTTGTTTCGATGTTGATGGGGGCGGTTTATGGCTACTTCCTCGATTATTGCCGCCGACTGTTTAAAGTCAGCCGTTACCAGCAGGTAAAAGCCTGA", - "dna_sequence_length": 450, - "functions": [ - "alanine exporter, alanine-inducible, 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"ATGTATTTACGACCAGACGAGGTGGCGCGCGTACTTGAAAAAGTCGGTTTTACTGTCGATGTGGTAACCCAGAAAGCGTATGGTTACCGCCGTGGGGAAAATTATGTCTATGTTAATCGCGAAGCGCGAATGGGACGTACCGCTCTGGTAATTCATCCAACATTAAAAGAACGCAGTTCGACACTGGCTGAACCCGCTTCCGATATTAAAACTTGCGATCATTACCAGCAATTTCCGCTCTATTTAGCAGGCGAGCGACACGAGCATTACGGTATCCCGCATGGCTTTAGTTCGCGTGTTGCGCTTGAACGTTATTTGAATGGTTTATTTGGCGAAGCCAGTTAA", - "dna_sequence_length": 345, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2640", - "location": [ - [ - "NC_000913", - 2799994, - "-", - 345 - ] - ], - "md5": "da762412b0a503ea2a38879d6e7e6eea", - "parent_gene": "", - "protein_md5": "4c50622d1f0d6d6c99358eb8ce0a5eb9", - "protein_translation": "MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARMGRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVALERYLNGLFGEAS", - "protein_translation_length": 114, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008799" - ], - [ - "gene_synonym", - "ygaM" - ], - [ - "gene_synonym", - "JW2647" - ], - [ - "gene_synonym", - "GI:459201372" - ], - [ - "gene_synonym", - "b2672" - ], - [ - "gene_synonym", - "NP_417158.4" - ], - [ - "gene_synonym", - "EcoGene:EG13285" - ], - [ - "gene_synonym", - "ECK2666" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADQ7" - ], - [ - "gene_synonym", - "GeneID:947157" - ] - ], - "dna_sequence": "ATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGCGTGCAGGATATCCAGAATGATGTCAATCAATTAGCTGACAGCCTCGAATCTGTATTGAAGTCCTGGGGCAGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTACTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAG", - "dna_sequence_length": 330, - "functions": [ - "putative membrane-anchored DUF883 family ribosome-binding protein" - ], - "id": "CDS_2641", - "location": [ - [ - "NC_000913", - 2800146, - "+", - 330 - ] - ], - "md5": "96f326912bf920ad0036881c1c6c529d", - "parent_gene": "", - "protein_md5": "88dafdd2f1e6b9926ee59fd6763d3056", - "protein_translation": "MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGALLSMRKS", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC65" - ], - [ - "gene_synonym", - "ygaN" - ], - [ - "gene_synonym", - "JW2648" - ], - [ - "gene_synonym", - "nrdH" - ], - [ - "gene_synonym", - "GeneID:947161" - ], - [ - "gene_synonym", - "b2673" - ], - [ - "gene_synonym", - "NP_417159.1" - ], - [ - "gene_synonym", - "EcoGene:EG13286" - ], - [ - "gene_synonym", - "ECK2667" - ], - [ - "gene_synonym", - "GI:16130587" - ], - [ - "gene_synonym", - "ASAP:ABE-0008802" - ] - ], - "dna_sequence": "ATGCGCATTACTATTTACACTCGTAACGATTGCGTTCAGTGCCACGCCACCAAACGGGCGATGGAAAACCGGGGCTTTGATTTTGAAATGATTAATGTCGATCGCGTTCCTGAAGCGGCAGAAGCGTTGCGTGCTCAGGGCTTTCGTCAGTTGCCGGTAGTGATTGCTGGCGATCTTAGCTGGTCTGGTTTCCGTCCGGACATGATTAACCGTCTGCATCCAGCGCCACACGCGGCCAGTGCATGA", - "dna_sequence_length": 246, - "functions": 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"ATGAGCCAGCTCGTCTACTTCTCCAGCAGCTCCGAAAACACGCAGCGTTTTATCGAACGTTTAGGTCTGCCCGCGGTGCGCATCCCGCTCAATGAGCGGGAACGGATTCAGGTAGACGAGCCTTACATCCTGATCGTGCCCTCTTACGGCGGCGGCGGTACGGCTGGCGCGGTGCCACGACAGGTAATTCGCTTTTTAAACGACGAGCACAACCGGGCGTTGCTTCGCGGCGTTATTGCTTCTGGTAATCGCAACTTTGGTGAGGCGTATGGCCGCGCCGGAGATGTGATTGCCCGGAAATGCGGCGTGCCGTGGCTGTACCGTTTTGAACTCATGGGTACGCAAAGCGATATCGAAAACGTTCGTAAAGGAGTAACCGAATTTTGGCAACGACAACCGCAGAATGCCTGA", - "dna_sequence_length": 411, - "functions": [ - "NrdEF cluster assembly flavodoxin" - ], - "id": "CDS_2643", - "location": [ - [ - "NC_000913", - 2800965, - "+", - 411 - ] - ], - "md5": "18af8471f5bf0032e134bb0b45dc1fa1", - "parent_gene": "", - "protein_md5": "a29f59ebafce7e0553309b9794d32327", - "protein_translation": "MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYILIVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCGVPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA", - "protein_translation_length": 136, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2650" - ], - [ - "gene_synonym", - "nrdE" - ], - [ - "gene_synonym", - "b2675" - ], - [ - "gene_synonym", - "EcoGene:EG20257" - ], - [ - "gene_synonym", - "ASAP:ABE-0008806" - ], - [ - "gene_synonym", - "GeneID:947155" - ], - [ - "gene_synonym", - "GI:16130589" - ], - [ - "gene_synonym", - "ECK2669" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39452" - ], - [ - "gene_synonym", - "NP_417161.1" - ] - ], - "dna_sequence": "TTGGCAACGACAACCGCAGAATGCCTGACGCAGGAAACGATGGATTACCACGCGCTGAATGCGATGCTTAACCTCTACGATAGCGCAGGTCGCATTCAGTTCGATAAAGACCGCCAGGCCGTTGACGCCTTTATTGCGACGCATGTGCGTCCGAACAGTGTGACCTTCAGTAGCCAGCAGCAGCGCCTGAACTGGCTGGTCAACGAAGGTTACTATGATGAAAGCGTTCTTAATCGCTACTCTCGCGACTTTGTCATTACGCTGTTTACCCACGCACACACCAGCGGTTTTCGTTTCCAGACATTCCTCGGGGCATGGAAGTTTTACACCAGCTATACGTTGAAGACATTCGACGGTAAACGTTATCTGGAAGATTTTGCCGATCGAGTAACGATGGTGGCGCTGACGCTGGCACAAGGCGATGAGACGCTGGCGTTGCAACTGACCGATGAAATGCTGTCAGGACGCTTTCAGCCAGCCACGCCAACATTCCTCAACTGCGGTAAGCAGCAGCGCGGCGAACTGGTTTCCTGTTTTTTGCTGCGTATTGAAGACAATATGGAGTCGATTGGTCGGGCGGTAAATTCCGCACTGCAGCTGTCGAAACGCGGCGGCGGCGTAGCATTTTTGCTGTCGAATCTGCGAGAAGCGGGCGCGCCAATTAAACGTATTGAAAATCAATCTTCTGGCGTAATTCCGGTGATGAAAATGCTGGAAGACGCATTTTCCTATGCCAACCAACTCGGCGCTCGTCAGGGGGCTGGTGCAGTCTATTTACATGCTCATCATCCCGATATTCTGCGTTTTCTCGACACGAAACGGGAAAATGCCGACGAAAAAATCCGCATTAAAACACTGTCGCTTGGCGTGGTGATCCCGGATATCACTTTCCATCTGGCAAAAGAGAATGCGCAGATGGCGCTGTTTTCGCCTTATGACGTAGAGCGAGTTTATGGCAAGCCGTTTGCCGATGTGGCCATCAGCCAACACTATGACGAACTGGTTGCCGATGAACGCATTCGCAAAAAATACCTCAACGCCCGTGATTTCTTCCAGCGACTGGCAGAAATCCAGTTTGAGTCCGGCTATCCCTACATCATGTATGAAGACACGGTAAACCGTGCTAACCCTATCGCCGGGCGCATAAATATGAGTAATCTCTGCTCAGAAATTTTGCAGGTTAACAGCGCCTCAGAGTATGACGAGAATCTCGACTATACCCGCACAGGCCATGATATTTCCTGCAATTTAGGTTCGTTGAATATTGCGCACACCATGGATTCCCCCGATTTTGCCCGCACGGTAGAGACTGCCGTGCGCGGTTTAACGGCAGTATCAGATATGAGTCATATCCGCAGCGTGCCGTCCATCGAAGCCGGAAATGCCGCCTCGCACGCCATCGGACTGGGGCAGATGAATTTACACGGCTATCTGGCGCGAGAAGGCATCGCTTATGGTTCGCCGGAAGCACTGGATTTCACCAATCTCTATTTCTATGCCATCACCTGGCATGCACTGCGTACCTCGATGTTGCTGGCACGCGAACGCGGTGAAACCTTCGCCGGGTTCAAACAGTCACGCTATGCCAGTGGTGAATATTTTAGCCAATATCTGCAAGGGAACTGGCAGCCGAAAACGGCGAAAGTTGGCGAACTGTTTACCCGTAGCGGTATTACGTTACCTACCCGTGAGATGTGGGCGCAGCTGCGCGACGACGTGATGCGCTACGGCATATACAACCAGAATCTTCAGGCGGTGCCGCCAACCGGTTCTATCTCTTATATCAACCATGCTACGTCGAGTATTCATCCGATTGTGGCGAAAGTAGAGATACGCAAAGAGGGCAAAACAGGACGCGTTTACTACCCTGCCCCGTTTATGACTAACGAGAATCTGGCGCTGTATCAGGACGCTTACGAAATTGGCGCAGAAAAGATCATCGACACCTACGCGGAAGCGACTCGCCATGTCGATCAGGGGCTGTCGCTGACGCTTTTTTTCCCCGATACCGCCACCACTCGCGATATCAACAAAGCGCAGATTTACGCCTGGCGCAAGGGTATCAAAACGCTCTATTACATCCGCCTGCGTCAGATGGCGCTGGAAGGCACTGAAATTGAAGGCTGCGTCTCCTGTGCACTTTAA", - "dna_sequence_length": 2145, - "functions": [ - "ribonucleoside-diphosphate reductase 2, alpha subunit" - ], - "id": "CDS_2644", - "location": [ - [ - "NC_000913", - 2801348, - "+", - 2145 - ] - ], - "md5": "2b096a5a97b4193e6ab91e2e81b195dc", - "parent_gene": "", - "protein_md5": "8f67e23b121295d075cc56c8858a5c5a", - "protein_translation": "MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAFIATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFTHAHTSGFRFQTFLGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDETLALQLTDEMLSGRFQPATPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAGAPIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKRENADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADVAISQHYDELVADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPIAGRINMSNLCSEILQVNSASEYDENLDYTRTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSHIRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRTSMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFTRSGITLPTREMWAQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPAPFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIYAWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL", - "protein_translation_length": 714, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417162.1" - ], - [ - "gene_synonym", - "JW2651" - ], - [ - "gene_synonym", - "GeneID:947149" - ], - [ - "gene_synonym", - "nrdF" - ], - [ - "gene_synonym", - "b2676" - ], - [ - "gene_synonym", - "ygaD" - ], - [ - "gene_synonym", - "ECK2670" - ], - [ - "gene_synonym", - "GI:16130590" - ], - [ - "gene_synonym", - "ASAP:ABE-0008808" - ], - [ - "gene_synonym", - "EcoGene:EG12381" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37146" - ] - ], - "dna_sequence": "ATGAAACTCTCACGTATCAGCGCCATCAACTGGAACAAGATATCTGACGATAAAGATCTGGAGGTGTGGAATCGCCTGACCAGCAATTTCTGGCTACCAGAAAAGGTGCCGCTGTCGAACGATATTCCTGCCTGGCAGACATTAACTGTCGTAGAACAACAACTGACGATGCGCGTTTTTACTGGCCTGACGCTGCTCGACACGCTGCAAAATGTTATCGGCGCGCCTTCTCTGATGCCCGATGCACTCACGCCTCATGAAGAAGCGGTATTATCGAATATCAGCTTTATGGAAGCGGTTCATGCCCGCTCTTACAGTTCGATTTTCTCGACGCTATGCCAGACCAAAGATGTCGATGCCGCCTACGCCTGGAGTGAAGAAAACGCACCGTTGCAGCGAAAAGCTCAGATTATTCAGCAACATTATCGCGGTGATGATCCGCTGAAAAAGAAAATCGCCAGTGTGTTTCTTGAATCTTTTTTGTTCTATTCCGGTTTCTGGCTGCCGATGTATTTTTCCAGCCGCGGAAAGCTGACCAATACCGCGGACCTGATCCGTCTGATTATCCGCGATGAAGCAGTCCACGGTTACTACATAGGCTATAAATATCAGAAAAACATGGAAAAGATATCTCTGGGACAACGTGAAGAGTTGAAGAGTTTCGCCTTCGATTTGTTGCTGGAACTCTACGACAACGAGTTGCAATACACCGATGAGCTGTACGCCGAAACCCCGTGGGCTGACGATGTGAAAGCGTTTCTCTGTTACAACGCCAATAAGGCTTTGATGAATCTGGGCTACGAACCGTTATTTCCCGCAGAAATGGCGGAAGTGAATCCGGCAATCCTCGCCGCGCTTTCGCCGAATGCCGATGAAAATCACGATTTCTTTTCCGGTTCAGGCTCCTCTTATGTGATGGGGAAAGCGGTTGAAACAGAAGATGAAGACTGGAATTTCTGA", - "dna_sequence_length": 960, - "functions": [ - "ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein" - ], - "id": "CDS_2645", - "location": [ - [ - "NC_000913", - 2803502, - "+", - 960 - ] - ], - "md5": "a5ddfd27fbbff075f681be44042d04a7", - "parent_gene": "", - "protein_md5": "d30c3989e5aaef4ce73878a434b0de67", - "protein_translation": "MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF", - "protein_translation_length": 319, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2652" - ], - [ - "gene_synonym", - "EcoGene:EG10771" - ], - [ - "gene_synonym", - "GeneID:947148" - ], - [ - "gene_synonym", - "proV" - ], - [ - "gene_synonym", - "proU" - ], - [ - "gene_synonym", - "GI:16130591" - ], - [ - "gene_synonym", - "NP_417163.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P14175" - ], - [ - "gene_synonym", - "ASAP:ABE-0008814" - ], - [ - "gene_synonym", - "ECK2671" - ], - [ - "gene_synonym", - "b2677" - ], - [ - "gene_synonym", - "osrA" - ] - ], - "dna_sequence": "ATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCTGATTGATGGTGTGGATATTGCCAAAATATCCGACGCCGAACTCCGTGAGGTGCGCAGAAAAAAGATTGCGATGGTCTTCCAGTCCTTTGCCTTAATGCCGCATATGACCGTGCTGGACAATACTGCGTTCGGTATGGAATTGGCCGGAATTAATGCCGAAGAACGCCGGGAAAAAGCCCTTGATGCACTGCGTCAGGTCGGGCTGGAAAATTATGCCCACAGCTACCCGGATGAACTCTCTGGCGGGATGCGTCAACGTGTGGGATTAGCCCGCGCGTTAGCGATTAATCCGGATATATTATTAATGGACGAAGCCTTCTCGGCGCTCGATCCATTAATTCGCACCGAGATGCAGGATGAGCTGGTAAAATTACAGGCGAAACATCAGCGCACCATTGTCTTTATTTCCCACGATCTTGATGAAGCCATGCGTATTGGCGACCGAATTGCCATTATGCAAAATGGTGAAGTGGTACAGGTCGGCACACCGGATGAAATTCTCAATAATCCGGCGAATGATTATGTCCGTACCTTCTTCCGTGGCGTTGATATTAGTCAGGTATTCAGTGCGAAAGATATTGCCCGCCGGACACCGAATGGCTTAATTCGTAAAACCCCTGGCTTCGGCCCACGTTCGGCACTGAAATTATTGCAGGATGAAGATCGCGAATATGGCTACGTTATCGAACGCGGTAATAAGTTTGTCGGCGCAGTCTCCATCGATTCGCTTAAAACCGCGTTAACGCAGCAGCAAGGTCTTGATGCGGCGCTGATTGATGCGCCGTTAGCAGTCGATGCACAAACGCCTCTTAGCGAGTTGCTCTCTCATGTCGGACAGGCACCCTGTGCGGTGCCCGTGGTCGACGAGGACCAACAGTATGTCGGCATCATTTCGAAAGGAATGCTGCTGCGCGCTTTAGATCGTGAGGGGGTAAATAATGGCTGA", - "dna_sequence_length": 1203, - "functions": [ - "glycine betaine/proline ABC transporter periplasmic binding protein" - ], - "id": "CDS_2646", - "location": [ - [ - "NC_000913", - 2804815, - "+", - 1203 - ] - ], - "md5": "b2b70eb39d8eeafeac59960cdd7cea34", - "parent_gene": "", - "protein_md5": "e726725ff59b4c2e0e1293fc2ea83fbb", - "protein_translation": "MAIKLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSAKDIARRTPNGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGAVSIDSLKTALTQQQGLDAALIDAPLAVDAQTPLSELLSHVGQAPCAVPVVDEDQQYVGIISKGMLLRALDREGVNNG", - "protein_translation_length": 400, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10772" - ], - [ - "gene_synonym", - "JW2653" - ], - [ - "gene_synonym", - "b2678" - ], - [ - "gene_synonym", - "proW" - ], - [ - "gene_synonym", - "GeneID:947145" - ], - [ - "gene_synonym", - "proU" - ], - [ - "gene_synonym", - "ASAP:ABE-0008816" - ], - [ - "gene_synonym", - "GI:16130592" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P14176" - ], - [ - "gene_synonym", - "ECK2672" - ], - [ - "gene_synonym", - "osrA" - ], - [ - "gene_synonym", - "NP_417164.1" - ] - ], - "dna_sequence": "ATGGCTGATCAAAATAATCCGTGGGATACCACGCCAGCGGCGGACAGTGCCGCGCAATCCGCAGACGCCTGGGGTACACCGACGACTGCACCGACTGACGGCGGTGGTGCTGACTGGCTGACCAGTACGCCTGCGCCAAACGTCGAGCATTTTAATATTCTCGATCCGTTCCATAAAACGCTGATCCCGCTCGACAGTTGGGTCACTGAAGGGATCGACTGGGTCGTTACCCATTTCCGTCCCGTCTTCCAGGGCGTGCGCGTTCCGGTTGATTATATCCTCAACGGTTTCCAGCAATTGCTGCTGGGTATGCCCGCACCGGTGGCGATTATCGTTTTCGCTCTCATCGCCTGGCAGATTTCCGGGGTCGGAATGGGTGTGGCGACGCTGGTTTCGCTGATTGCCATCGGCGCAATCGGTGCCTGGTCGCAGGCAATGGTGACTCTGGCGCTGGTGTTAACCGCCCTGCTGTTCTGTATCGTCATCGGTTTGCCGTTGGGGATATGGCTGGCGAGAAGTCCGCGAGCGGCGAAAATTATTCGTCCACTGCTTGATGCCATGCAGACCACGCCAGCGTTTGTTTATCTGGTGCCAATCGTCATGCTATTTGGTATCGGTAACGTGCCGGGCGTGGTGGTGACGATCATCTTTGCTCTGCCGCCGATTATCCGTCTGACCATTCTGGGGATTAACCAGGTTCCGGCGGATCTGATTGAAGCCTCGCGCTCATTCGGTGCCAGCCCGCGCCAGATGCTGTTCAAAGTTCAGTTACCGCTGGCGATGCCGACCATTATGGCGGGCGTTAACCAGACGCTGATGCTGGCCCTTTCTATGGTGGTCATCGCCTCGATGATTGCCGTCGGCGGGTTGGGTCAGATGGTACTTCGCGGTATCGGTCGTCTGGATATGGGGCTTGCCACCGTTGGCGGCGTCGGGATTGTGATCCTCGCCATTATCCTCGATCGTCTGACGCAGGCCGTTGGGCGCGACTCACGCAGTCGCGGCAACCGTCGCTGGTACACCACTGGCCCTGTTGGTCTGCTGACCCGCCCATTCATTAAGTAA", - "dna_sequence_length": 1065, - "functions": [ - "glycine betaine/proline ABC transporter permease" - ], - "id": "CDS_2647", - "location": [ - [ - "NC_000913", - 2806010, - "+", - 1065 - ] - ], - "md5": "4768db9e411132aea99f1c0e0fddc494", - "parent_gene": "", - "protein_md5": "34b1ad9278660782fe02aef695c3c6ee", - "protein_translation": "MADQNNPWDTTPAADSAAQSADAWGTPTTAPTDGGGADWLTSTPAPNVEHFNILDPFHKTLIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLLGMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCIVIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSRGNRRWYTTGPVGLLTRPFIK", - "protein_translation_length": 354, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10773" - ], - [ - "gene_synonym", - "JW2654" - ], - [ - "gene_synonym", - "b2679" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFM2" - ], - [ - "gene_synonym", - "proU" - ], - [ - "gene_synonym", - "proX" - ], - [ - "gene_synonym", - "GeneID:947165" - ], - [ - "gene_synonym", - "GI:16130593" - ], - [ - "gene_synonym", - "ECK2673" - ], - [ - "gene_synonym", - "NP_417165.1" - ], - [ - "gene_synonym", - "osrA" - ], - [ - "gene_synonym", - "ASAP:ABE-0008818" - ] - ], - "dna_sequence": "ATGCGACATAGCGTACTTTTTGCGACAGCGTTTGCCACGCTTATCTCTACACAAACTTTTGCTGCCGATCTGCCGGGCAAAGGCATTACTGTTAATCCAGTTCAGAGCACCATCACTGAAGAAACCTTCCAGACGCTGCTGGTCAGTCGTGCGCTGGAGAAATTAGGTTATACCGTCAACAAACCCAGCGAAGTAGATTACAACGTTGGCTACACCTCGCTTGCTTCCGGCGATGCAACCTTCACCGCCGTGAACTGGACGCCACTGCATGACAACATGTACGAAGCTGCCGGTGGCGATAAGAAATTTTATCGTGAAGGGGTATTTGTTAACGGCGCGGCACAGGGTTACCTGATCGATAAGAAAACCGCCGACCAGTACAAAATCACCAACATCGCACAACTGAAAGATCCGAAGATCGCCAAACTGTTCGATACCAACGGCGACGGAAAAGCGGATTTAACCGGTTGTAACCCTGGCTGGGGCTGCGAAGGTGCGATCAACCACCAGCTTGCCGCGTATGAACTGACCAACACCGTGACGCATAATCAGGGGAACTACGCAGCGATGATGGCCGACACCATCAGTCGCTACAAAGAGGGCAAACCGGTGTTTTATTACACCTGGACGCCGTACTGGGTGAGTAACGAACTGAAGCCGGGCAAAGATGTCGTCTGGTTGCAGGTGCCGTTCTCCGCACTGCCGGGCGATAAAAACGCCGATACCAAACTGCCGAATGGTGCGAATTATGGCTTCCCGGTCAGCACCATGCATATCGTTGCCAACAAAGCCTGGGCCGAGAAAAACCCGGCAGCAGCGAAACTGTTTGCCATTATGCAGTTGCCAGTGGCAGATATTAACGCCCAGAACGCCATTATGCATGACGGCAAAGCCTCAGAAGGCGATATTCAGGGACACGTTGATGGTTGGATCAAAGCCCACCAGCAGCAGTTCGATGGCTGGGTGAATGAGGCGCTGGCAGCGCAGAAGTAA", - "dna_sequence_length": 993, - "functions": [ - "glycine betaine/proline ABC transporter periplasmic binding protein", - "cold shock protein" - ], - "id": "CDS_2648", - "location": [ - [ - "NC_000913", - 2807132, - "+", - 993 - ] - ], - "md5": "5f05ea0bc75844202a66eb177b7aff6b", - "parent_gene": "", - "protein_md5": "f88dc9aa701cbe535d01e68eb90355ee", - "protein_translation": "MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQTLLVSRALEKLGYTVNKPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKKFYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPGWGCEGAINHQLAAYELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWAEKNPAAAKLFAIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAAQK", - "protein_translation_length": 330, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:2847696" - ], - [ - "gene_synonym", - "JW2655" - ], - [ - "gene_synonym", - "b2681" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76628" - ], - [ - "gene_synonym", - "EcoGene:EG13527" - ], - [ - "gene_synonym", - "ECK2674" - ], - [ - "gene_synonym", - "ygaY" - ], - [ - "gene_synonym", - "ygaX" - ], - [ - "gene_synonym", - "ASAP:ABE-0008822" - ], - [ - "gene_synonym", - "ASAP:ABE-0008824" - ] - ], - "dna_sequence": "ATGACTAAACCTAATCATGAGCTTAGCCCGGCGCTGATCGTGCTGATGTCTATCGCCACCGGTCTGGCGGTAGCCAGTAACTATTACGCCCAGCCATTGCTCGACACCATCGCGCGTAACTTTTCCCTTTCCGCCAGTTCGGCAGGCTTTATTGTTACCGCCGCGCAGTTGGGCTATGCCGCAGGTCTACTGTTTCTTGTTCCCCTCGGTGATATGTTTGAACGCCGCCGCCTGATTGTCTCGATGACCTTACTGGCGGCAGGCGGCATGTTGATTACCGCCAGCAGTCAGTCGCTGGCGATGATGATCCTCGGTACGGCATTAACCGGTTTATTCTCAGTCGTGGCACAAATTCTGGTTCCGCTGGCAGCGACGCTGGCTTCACCGGATAAACGCGGCAAAGTGGTTGGCACTATTATGAGCGGTCTGCTGTTGGGGATCTTGCTGGCACGGACAGTTGCCGGATTGCTGGCGAATCTCGGCGGCTGGCGCACCGTCTTTTGGGTTGCTTCGGTGTTAATGGCACTGATGGCGCTGGCATTATGGCGTGGTCTGCCACAAATGAAATCAGAAACCCACCTCAACTACCCACAGTTGTTGGGTTCCGTTTTCAGTATGTTTATCAGCGATAAAATTCTGCGTACCCGCGCGTTGCTGGGCTGCCTGACCTTTGCCAATTTCAGCATTCTCTGGACCTCAATGGCCTTTTTGCTTGCCGCTCCACCTTTTAACTACAGCGATGGTGTCATTGGTCTGTTTGGACTTGCGGGAGCTGCCGGAGCGTTGGGCGCTCGTCCGGCGGGCGGTTTTGCCGATAAGGGCAAATCGCACCACACCACAACTTTCGGTCTGCTGCTGCTATTACTTTCATGGCTGGCGATCTGGTTTGGTCACACTTCCGTACTGGCGTTGATTATCGGAATCCTGGTGCTGGATCTCACCGTGCAGGGCGTGCATATCACTAACCAGACGGTAATTTATCGGATACATCCTGATGCGCGCAATCGCCTGACCGCAGGTTACATGACTAGCTACTTTATTGGCGGTGCCGCCGGTTCGCTAATTTCAGCCTCAGCCTGGCAACATGGCGGTTGGGCTGGCGTTTGTCTGGCTGGCGCGACGATTGCCCTGGTTAACTTACTGGTCTGGTGGCGAGGTTTTCATCGTCAGGAAGCCGCAAATTAA", - "dna_sequence_length": 1185, - "id": "CDS_2649", - "location": [ - [ - "NC_000913", - 2808316, - "+", - 261 - ], - [ - "NC_000913", - 2808570, - "+", - 924 - ] - ], - "md5": "9d4b1ea3544d58a9a5e59433bb8d15af", - "parent_gene": "", - "protein_md5": "370b5e5a8e060f91f863c8b4d7bbca63", - "protein_translation": "MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMMILGTALTGLFSVVAQILVPLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANLGGWRTVFWVASVLMALMALALWRGLPQMKSETHLNYPQLLGSVFSMFISDKILRTRALLGCLTFANFSILWTSMAFLLAAPPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKSHHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQGVHITNQTVIYRIHPDARNRLTAGYMTSYFIGGAAGSLISASAWQHGGWAGVCLAGATIALVNLLVWWRGFHRQEAAN", - "protein_translation_length": 394, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008829" - ], - [ - "gene_synonym", - "EcoGene:EG13528" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76630" - ], - [ - "gene_synonym", - "b2682" - ], - [ - "gene_synonym", - "JW2657" - ], - [ - "gene_synonym", - "NP_417167.1" - ], - [ - "gene_synonym", - "GeneID:945093" - ], - [ - "gene_synonym", - "ygaZ" - ], - [ - "gene_synonym", - "GI:16130594" - ], - [ - "gene_synonym", - "ECK2676" - ] - ], - "dna_sequence": "ATGGAAAGCCCTACTCCACAGCCTGCTCCTGGTTCGGCGACCTTCATGGAAGGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGACCGTCATGGCAATGGATGTTCGCCATGTGTTGTATGGCCCGTCACTGCGTAGCCGTATTATTCAGCGTCTGCAAAAATCGAAAACCGCCCTGTGGGCGTTTGGCCTGACGGATGAGGTTTTTGCCGCCGCAACCGCAAAACTGGTACGCAATAATCGCCGCTGGAGCGAGAACTGGATGATCGGCATTGCCTTCAGTTCATGGTCATCGTGGGTATTTGGTACGGTAATAGGGGCATTCTCCGGCAGCGGCTTGCTGCAAGGTTATCCCGCCGTTGAAGCTGCATTAGGTTTTATGCTTCCGGCACTCTTTATGAGTTTCCTGCTCGCCTCTTTCCAGCGCAAACAATCTCTTTGCGTTACCGCAGCGTTAGTTGGTGCCCTTGCAGGCGTAACGCTATTTTCTATTCCCGTCGCCATTCTGGCAGGCATTGTCTGTGGCTGCCTCACTGCGTTAATCCAGGCATTCTGGCAAGGAGCGCCCGATGAGCTATGA", - "dna_sequence_length": 738, - "functions": [ - "putative L-valine exporter, norvaline resistance protein" - ], - "id": "CDS_2650", - "location": [ - [ - "NC_000913", - 2809617, - "+", - 738 - ] - ], - "md5": "348f5329c17959634e2a8c4bca1f109b", - "parent_gene": "", - "protein_md5": "97aeff5a7ac48c263c9c3432825a6690", - "protein_translation": "MESPTPQPAPGSATFMEGCKDSLPIVISYIPVAFAFGLNATRLGFSPLESVFFSCIIYAGASQFVITAMLAAGSSLWIAALTVMAMDVRHVLYGPSLRSRIIQRLQKSKTALWAFGLTDEVFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGAFSGSGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIPVAILAGIVCGCLTALIQAFWQGAPDEL", - "protein_translation_length": 245, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygaH" - ], - [ - "gene_synonym", - "b2683" - ], - [ - "gene_synonym", - "JW2658" - ], - [ - "gene_synonym", - "GeneID:945111" - ], - [ - "gene_synonym", - "EcoGene:EG12940" - ], - [ - "gene_synonym", - "ECK2677" - ], - [ - "gene_synonym", - "GI:16130595" - ], - [ - "gene_synonym", - "NP_417168.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P43667" - ], - [ - "gene_synonym", - "ASAP:ABE-0008831" - ] - ], - "dna_sequence": "ATGAGCTATGAGGTTCTGCTGCTTGGGTTACTAGTTGGCGTGGCGAATTATTGCTTCCGCTATTTGCCGCTGCGCCTGCGTGTGGGTAATGCCCGCCCAACCAAACGTGGCGCGGTAGGTATTTTGCTCGACACCATTGGCATCGCCTCGATATGCGCTCTGCTGGTTGTCTCTACCGCACCAGAAGTGATGCACGATACACGCCGTTTCGTGCCCACGCTGGTCGGCTTCGCGGTACTGGGTGCCAGTTTCTATAAAACACGCAGCATTATCATCCCAACACTGCTTAGTGCGCTGGCCTATGGGCTCGCCTGGAAAGTGATGGCGATTATATAA", - "dna_sequence_length": 336, - "functions": [ - "putative L-valine exporter, norvaline resistance protein" - ], - "id": "CDS_2651", - "location": [ - [ - "NC_000913", - 2810344, - "+", - 336 - ] - ], - "md5": "f1fc3993e938d8785a5cb5a67a1f098b", - "parent_gene": "", - "protein_md5": "2507a4ab2af9a92caef50a67e98a1a9e", - "protein_translation": "MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLDTIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYGLAWKVMAII", - "protein_translation_length": 111, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "mprA" - ], - [ - "gene_synonym", - "b2684" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACR9" - ], - [ - "gene_synonym", - "NP_417169.1" - ], - [ - "gene_synonym", - "JW2659" - ], - [ - "gene_synonym", - "emrR" - ], - [ - "gene_synonym", - "EcoGene:EG10603" - ], - [ - "gene_synonym", - "GI:16130596" - ], - [ - "gene_synonym", - "ASAP:ABE-0008834" - ], - [ - "gene_synonym", - "ECK2678" - ], - [ - "gene_synonym", - "GeneID:945282" - ] - ], - "dna_sequence": "ATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCTTCTGACTCGTCTTTGCATGCACATGCAAAGCAAGCTGCTGGAGAACCGCAATAAAATGCTGAAGGCTCAGGGGATTAACGAGACGTTGTTTATGGCGTTGATTACGCTGGAGTCTCAGGAAAACCACAGTATTCAGCCTTCTGAATTAAGTTGTGCTCTTGGATCATCCCGTACCAACGCGACGCGTATTGCCGATGAACTGGAAAAACGCGGTTGGATCGAACGTCGTGAAAGCGATAACGATCGCCGCTGCCTGCATCTGCAATTAACGGAAAAAGGTCACGAGTTTTTGCGCGAGGTTTTACCACCGCAGCATAACTGCCTGCATCAACTCTGGTCCGCGCTCAGCACAACAGAAAAAGATCAGCTCGAGCAAATCACCCGCAAATTGCTCTCCCGTCTCGACCAGATGGAACAAGACGGTGTGGTTCTCGAAGCGATGAGCTAA", - "dna_sequence_length": 531, - "functions": [ - "transcriptional repressor of microcin B17 synthesis and multidrug efflux" - ], - "id": "CDS_2652", - "location": [ - [ - "NC_000913", - 2810770, - "+", - 531 - ] - ], - "md5": "5b38a7ff45ddb3e35c65ce2eeb082bba", - "parent_gene": "", - "protein_md5": "64bea006ef1b176c4639c5dd6c38a563", - "protein_translation": "MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIERRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLSRLDQMEQDGVVLEAMS", - "protein_translation_length": 176, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2685" - ], - [ - "gene_synonym", - "EcoGene:EG11354" - ], - [ - "gene_synonym", - "JW2660" - ], - [ - "gene_synonym", - "NP_417170.1" - ], - [ - "gene_synonym", - "GeneID:947166" - ], - [ - "gene_synonym", - "GI:16130597" - ], - [ - "gene_synonym", - "ASAP:ABE-0008838" - ], - [ - "gene_synonym", - "emrA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27303" - ], - [ - "gene_synonym", - "ECK2679" - ] - ], - "dna_sequence": "ATGAGCGCAAATGCGGAGACTCAAACCCCGCAGCAACCGGTAAAGAAGAGCGGCAAACGTAAGCGTCTGCTCCTCCTTCTCACCTTGCTCTTTATAATTATTGCCGTAGCGATAGGGATTTATTGGTTTTTGGTACTGCGTCACTTCGAAGAAACCGATGACGCATACGTGGCAGGGAATCAAATTCAAATTATGTCTCAGGTGTCTGGCAGCGTGACGAAAGTCTGGGCCGATAACACCGATTTTGTAAAAGAAGGCGACGTGCTGGTCACTCTCGACCCGACAGATGCTCGCCAGGCGTTTGAAAAAGCCAAAACTGCACTGGCTTCCAGCGTTCGCCAAACCCACCAGCTGATGATTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGCTGGAGCGTACTCGTATTATCAGTCCGATGACCGGTTATGTCTCCCGCCGCGCGGTACAGCCTGGGGCGCAAATTAGCCCAACGACGCCGCTGATGGCGGTCGTTCCAGCCACCAATATGTGGGTGGATGCCAACTTTAAAGAGACGCAGATTGCCAATATGCGTATCGGTCAGCCGGTCACTATCACCACGGATATTTACGGCGATGATGTGAAATACACCGGTAAAGTGGTTGGTCTGGATATGGGCACAGGTAGCGCGTTCTCACTGCTTCCAGCGCAAAATGCGACCGGTAACTGGATCAAAGTCGTTCAGCGTCTGCCTGTGCGTATCGAACTGGACCAGAAACAGCTGGAGCAATATCCGCTGCGTATCGGTTTGTCCACGCTGGTGAGCGTCAATACCACTAACCGTGACGGTCAGGTACTGGCAAATAAAGTACGTTCCACTCCGGTAGCGGTAAGCACCGCGCGTGAAATCAGCCTGGCACCTGTCAATAAACTGATCGACGATATCGTAAAAGCTAACGCTGGCTAA", - "dna_sequence_length": 1173, - "functions": [ - "multidrug efflux system" - ], - "id": "CDS_2653", - "location": [ - [ - "NC_000913", - 2811427, - "+", - 1173 - ] - ], - "md5": "c6101f9dcdf5873eb5644c6a45ff0010", - "parent_gene": "", - "protein_md5": "5976bc202774a6addd5b30b7feebb517", - "protein_translation": "MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFLVLRHFEETDDAYVAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRIISPMTGYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITTDIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYPLRIGLSTLVSVNTTNRDGQVLANKVRSTPVAVSTAREISLAPVNKLIDDIVKANAG", - "protein_translation_length": 390, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2686" - ], - [ - "gene_synonym", - "JW2661" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEJ0" - ], - [ - "gene_synonym", - "ASAP:ABE-0008840" - ], - [ - "gene_synonym", - "EcoGene:EG11439" - ], - [ - "gene_synonym", - "NP_417171.1" - ], - [ - "gene_synonym", - "GeneID:947167" - ], - [ - "gene_synonym", - "emrB" - ], - [ - "gene_synonym", - "ECK2680" - ], - [ - "gene_synonym", - "GI:16130598" - ] - ], - "dna_sequence": "ATGCAACAGCAAAAACCGCTGGAAGGCGCGCAACTGGTCATTATGACGATTGCGCTGTCACTGGCGACATTCATGCAGGTGCTGGACTCCACCATTGCTAACGTGGCGATCCCCACTATCGCCGGGAATCTGGGCTCATCGCTCAGCCAGGGAACGTGGGTAATCACTTCTTTCGGGGTGGCGAATGCCATCTCGATCCCGCTTACCGGCTGGCTGGCAAAGCGCGTCGGGGAAGTGAAACTGTTCCTTTGGTCCACCATCGCCTTTGCTATTGCGTCGTGGGCGTGTGGTGTCTCCAGCAGCCTGAATATGCTGATCTTCTTCCGCGTGATTCAGGGGATTGTCGCCGGGCCGTTGATCCCGCTTTCGCAAAGTCTATTGCTGAATAACTACCCGCCAGCCAAACGCTCGATCGCGCTGGCGTTGTGGTCGATGACGGTGATTGTCGCGCCAATTTGCGGCCCGATCCTCGGCGGTTATATCAGCGATAATTACCACTGGGGCTGGATATTCTTCATCAACGTGCCGATTGGCGTGGCGGTGGTGTTGATGACACTGCAAACTCTGCGCGGACGTGAAACCCGCACCGAACGGCGGCGGATTGATGCCGTGGGGCTGGCACTGCTGGTTATTGGTATCGGCAGCCTGCAGATTATGCTCGACCGCGGTAAAGAGCTGGACTGGTTTTCATCACAGGAAATTATCATCCTTACCGTGGTGGCGGTGGTGGCTATCTGCTTCCTGATTGTCTGGGAGCTGACCGACGATAACCCGATAGTCGATCTGTCGTTGTTTAAGTCGCGCAACTTCACCATCGGCTGCTTGTGTATCAGCCTCGCGTATATGCTCTACTTCGGCGCTATTGTTCTGCTGCCGCAGTTGTTGCAGGAGGTCTACGGTTACACGGCGACCTGGGCAGGTTTGGCCTCTGCGCCGGTAGGGATTATTCCGGTGATCCTGTCGCCGATTATCGGCCGCTTCGCGCATAAACTGGATATGCGGCGGCTGGTAACCTTCAGCTTTATTATGTATGCCGTCTGCTTCTACTGGCGTGCCTATACCTTTGAACCAGGTATGGATTTTGGCGCGTCGGCCTGGCCGCAGTTTATCCAGGGGTTTGCGGTGGCCTGCTTCTTTATGCCGCTGACCACCATTACGCTGTCTGGTTTGCCACCGGAACGACTGGCGGCGGCATCGAGCCTCTCTAACTTTACGCGAACGCTGGCGGGGTCTATCGGCACGTCGATAACCACGACCATGTGGACCAACCGCGAGTCGATGCACCATGCGCAGTTGACTGAGTCGGTAAACCCGTTCAACCCGAATGCCCAGGCGATGTACAGTCAACTGGAAGGGCTTGGGATGACGCAACAGCAGGCATCAGGCTGGATTGCCCAGCAGATCACCAATCAGGGGCTGATTATTTCCGCCAATGAGATCTTCTGGATGTCAGCCGGGATATTCCTCGTCCTGCTGGGGCTGGTGTGGTTTGCTAAACCGCCATTTGGCGCAGGTGGCGGCGGAGGCGGTGCGCACTAA", - "dna_sequence_length": 1539, - "functions": [ - "multidrug efflux system protein" - ], - "id": "CDS_2654", - "location": [ - [ - "NC_000913", - 2812616, - "+", - 1539 - ] - ], - "md5": "25eb81b151488979185473a220b4fb5c", - "parent_gene": "", - "protein_md5": "29920038b47c3570580a45919f232718", - "protein_translation": "MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITSFGVANAISIPLTGWLAKRVGEVKLFLWSTIAFAIASWACGVSSSLNMLIFFRVIQGIVAGPLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGYISDNYHWGWIFFINVPIGVAVVLMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQIMLDRGKELDWFSSQEIIILTVVAVVAICFLIVWELTDDNPIVDLSLFKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGIIPVILSPIIGRFAHKLDMRRLVTFSFIMYAVCFYWRAYTFEPGMDFGASAWPQFIQGFAVACFFMPLTTITLSGLPPERLAAASSLSNFTRTLAGSIGTSITTTMWTNRESMHHAQLTESVNPFNPNAQAMYSQLEGLGMTQQQASGWIAQQITNQGLIISANEIFWMSAGIFLVLLGLVWFAKPPFGAGGGGGGAH", - "protein_translation_length": 512, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2687" - ], - [ - "gene_synonym", - "JW2662" - ], - [ - "gene_synonym", - "ASAP:ABE-0008842" - ], - [ - "gene_synonym", - "ygaG" - ], - [ - "gene_synonym", - "luxS" - ], - [ - "gene_synonym", - "EcoGene:EG12712" - ], - [ - "gene_synonym", - "NP_417172.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45578" - ], - [ - "gene_synonym", - "ECK2681" - ], - [ - "gene_synonym", - "GeneID:947168" - ], - [ - "gene_synonym", - "GI:16130599" - ] - ], - "dna_sequence": "ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACACCCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCCATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCAATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGCAATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGCACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCACTGCCGAAAGAGAAGTTGCAGGAACTGCACATCTAG", - "dna_sequence_length": 516, - "functions": [ - "S-ribosylhomocysteine lyase" - ], - "id": "CDS_2655", - "location": [ - [ - "NC_000913", - 2814733, - "-", - 516 - ] - ], - "md5": "bd81874366e57b86462089999e23dd3a", - "parent_gene": "", - "protein_md5": "9e01ce4838b08bee8178f00a8b68ada0", - "protein_translation": "MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELALPKEKLQELHI", - "protein_translation_length": 171, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "gshI" - ], - [ - "gene_synonym", - "JW2663" - ], - [ - "gene_synonym", - "gshA" - ], - [ - "gene_synonym", - "ASAP:ABE-0008845" - ], - [ - "gene_synonym", - "b2688" - ], - [ - "gene_synonym", - "GI:16130600" - ], - [ - "gene_synonym", - "EcoGene:EG10418" - ], - [ - "gene_synonym", - "GeneID:944881" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6W9" - ], - [ - "gene_synonym", - "NP_417173.1" - ], - [ - "gene_synonym", - "ECK2683" - ] - ], - "dna_sequence": "TTGATCCCGGACGTATCACAGGCGCTGGCCTGGCTGGAAAAACATCCTCAGGCGTTAAAGGGGATACAGCGTGGGCTGGAGCGCGAAACTTTGCGTGTTAATGCTGATGGCACACTGGCAACAACAGGTCATCCTGAAGCATTAGGTTCCGCACTGACGCACAAATGGATTACTACCGATTTTGCGGAAGCATTGCTGGAATTCATTACACCAGTGGATGGTGATATTGAACATATGCTGACCTTTATGCGCGATCTGCATCGTTATACGGCGCGCAATATGGGCGATGAGCGGATGTGGCCGTTAAGTATGCCATGCTACATCGCAGAAGGTCAGGACATCGAACTGGCACAGTACGGCACTTCTAACACCGGACGCTTTAAAACGCTGTATCGTGAAGGGCTGAAAAATCGCTACGGCGCGCTGATGCAAACCATTTCCGGCGTGCACTACAATTTCTCTTTGCCAATGGCATTCTGGCAAGCGAAGTGCGGTGATATCTCGGGCGCTGATGCCAAAGAGAAAATTTCTGCGGGCTATTTCCGCGTTATCCGCAATTACTATCGTTTCGGTTGGGTCATTCCTTATCTGTTTGGTGCATCTCCGGCGATTTGTTCTTCTTTCCTGCAAGGAAAACCAACGTCGCTGCCGTTTGAGAAAACCGAGTGCGGTATGTATTACCTGCCGTATGCGACCTCTCTTCGTTTGAGCGATCTCGGCTATACCAATAAATCGCAAAGCAATCTTGGTATTACCTTCAACGATCTTTACGAGTACGTAGCGGGCCTTAAACAGGCAATCAAAACGCCATCGGAAGAGTACGCGAAGATTGGTATTGAGAAAGACGGTAAGAGGCTGCAAATCAACAGCAACGTGTTGCAGATTGAAAACGAACTGTACGCGCCGATTCGTCCAAAACGCGTTACCCGCAGCGGCGAGTCGCCTTCTGATGCGCTGTTACGTGGCGGCATTGAATATATTGAAGTGCGTTCGCTGGACATCAACCCGTTCTCGCCGATTGGTGTAGATGAACAGCAGGTGCGATTCCTCGACCTGTTTATGGTCTGGTGTGCGCTGGCTGATGCACCGGAAATGAGCAGTAGCGAACTTGCCTGTACACGCGTTAACTGGAACCGGGTGATCCTCGAAGGTCGCAAACCGGGTCTGACGCTGGGTATCGGCTGCGAAACCGCACAGTTCCCGTTACCGCAGGTGGGTAAAGATCTGTTCCGCGATCTGAAACGCGTCGCGCAAACGCTGGATAGTATTAACGGCGGCGAAGCGTATCAGAAAGTGTGTGATGAACTGGTTGCCTGCTTCGATAATCCCGATCTGACTTTCTCTGCCCGTATCTTAAGGTCTATGATTGATACTGGTATTGGCGGAACAGGCAAAGCATTTGCAGAAGCCTACCGTAATCTGCTGCGTGAAGAGCCGCTGGAAATTCTGCGCGAAGAGGATTTTGTAGCCGAGCGCGAGGCGTCTGAACGCCGTCAGCAGGAAATGGAAGCCGCTGATACCGAACCGTTTGCGGTGTGGCTGGAAAAACACGCCTGA", - "dna_sequence_length": 1557, - "functions": [ - "glutamate-cysteine ligase" - ], - "id": "CDS_2656", - "location": [ - [ - "NC_000913", - 2816439, - "-", - 1557 - ] - ], - "md5": "84736ab56357366039fe606bca511df4", - "parent_gene": "", - "protein_md5": "89cccdf260e0f41f45e5960f73e90682", - "protein_translation": "MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTLATTGHPEALGSALTHKWITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMGDERMWPLSMPCYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFWQAKCGDISGADAKEKISAGYFRVIRNYYRFGWVIPYLFGASPAICSSFLQGKPTSLPFEKTECGMYYLPYATSLRLSDLGYTNKSQSNLGITFNDLYEYVAGLKQAIKTPSEEYAKIGIEKDGKRLQINSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDINPFSPIGVDEQQVRFLDLFMVWCALADAPEMSSSELACTRVNWNRVILEGRKPGLTLGIGCETAQFPLPQVGKDLFRDLKRVAQTLDSINGGEAYQKVCDELVACFDNPDLTFSARILRSMIDTGIGGTGKAFAEAYRNLLREEPLEILREEDFVAEREASERRQQEMEAADTEPFAVWLEKHA", - "protein_translation_length": 518, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2664" - ], - [ - "gene_synonym", - "EcoGene:EG13529" - ], - [ - "gene_synonym", - "GeneID:945419" - ], - [ - "gene_synonym", - "yqaA" - ], - [ - "gene_synonym", - "NP_417174.1" - ], - [ - "gene_synonym", - "b2689" - ], - [ - "gene_synonym", - "ASAP:ABE-0008847" - ], - [ - "gene_synonym", - "GI:16130601" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADR0" - ], - [ - "gene_synonym", - "ECK2684" - ] - ], - "dna_sequence": "GTGAGTGAAGCGTTATCGCTTTTCTCGTTGTTTGCCAGTAGTTTTCTCAGCGCTACACTATTACCCGGCAACTCCGAAGTCGTGCTGGTGGCAATGTTGCTTTCCGGGATCAGTCATCCCTGGGTTTTAGTTTTAACAGCAACAATGGGTAATAGCCTTGGAGGGTTAACTAACGTTATCCTTGGGCGTTTCTTTCCATTGCGTAAAACATCGCGCTGGCAAGAGAAAGCTACCGGCTGGCTGAAACGCTATGGTGCAGTCACGCTATTATTAAGCTGGATGCCCGTGGTTGGCGATTTACTGTGTCTGTTAGCGGGATGGATGCGCATCTCGTGGGGACCGGTAATCTTTTTTTTGTGCCTTGGTAAAGCGTTACGCTATGTTGCAGTTGCAGCAGCGACCGTTCAGGGCATGATGTGGTGGCACTAA", - "dna_sequence_length": 429, - "functions": [ - "COG1238 family inner membrane protein" - ], - "id": "CDS_2657", - "location": [ - [ - "NC_000913", - 2816940, - "-", - 429 - ] - ], - "md5": "d13db9f97849614d0c23432740f721c0", - "parent_gene": "", - "protein_md5": "7bae19524ca5570aea882a5a17ebed33", - "protein_translation": "MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISHPWVLVLTATMGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLCLLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH", - "protein_translation_length": 142, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2690" - ], - [ - "gene_synonym", - "NP_417175.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008850" - ], - [ - "gene_synonym", - "JW2665" - ], - [ - "gene_synonym", - "yqaB" - ], - [ - "gene_synonym", - "EcoGene:EG13530" - ], - [ - "gene_synonym", - "GI:16130602" - ], - [ - "gene_synonym", - "GeneID:945776" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77475" - ], - [ - "gene_synonym", - "ECK2685" - ] - ], - "dna_sequence": "ATGTACGAGCGTTATGCAGGTTTAATTTTTGATATGGATGGCACAATCCTGGATACGGAGCCTACGCACCGTAAAGCGTGGCGCGAAGTATTAGGGCACTACGGTCTTCAGTACGATATTCAGGCGATGATTGCGCTTAATGGATCGCCCACCTGGCGTATTGCTCAGGCAATTATTGAGCTGAATCAGGCCGATCTCGACCCGCATGCGTTAGCGCGTGAAAAAACAGAAGCAGTAAGAAGTATGCTGCTGGATAGCGTCGAACCGCTTCCTCTTGTTGATGTGGTGAAAAGTTGGCATGGTCGTCGCCCAATGGCTGTAGGAACGGGGAGTGAAAGCGCCATCGCTGAGGCATTGCTGGCGCACCTGGGATTACGCCATTATTTTGACGCCGTCGTCGCTGCCGATCACGTCAAACACCATAAACCCGCGCCAGACACATTTTTGTTGTGCGCGCAGCGTATGGGCGTGCAACCGACGCAGTGTGTGGTCTTTGAAGATGCCGATTTCGGTATTCAGGCGGCCCGTGCAGCAGGCATGGACGCCGTGGATGTTCGCTTGCTGTGA", - "dna_sequence_length": 567, - "functions": [ - "fructose-1-P and 6-phosphogluconate phosphatase" - ], - "id": "CDS_2658", - "location": [ - [ - "NC_000913", - 2817503, - "-", - 567 - ] - ], - "md5": "1fab3f75c618ff761191d68695b7a73c", - "parent_gene": "", - "protein_md5": "1a107e0316203262289f1c4569facdd5", - "protein_translation": "MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDIQAMIALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVRSMLLDSVEPLPLVDVVKSWHGRRPMAVGTGSESAIAEALLAHLGLRHYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAAGMDAVDVRLL", - "protein_translation_length": 188, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2666" - ], - [ - "gene_synonym", - "b2696" - ], - [ - "gene_synonym", - "GI:16130603" - ], - [ - "gene_synonym", - "ASAP:ABE-0008866" - ], - [ - "gene_synonym", - "EcoGene:EG11447" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69913" - ], - [ - "gene_synonym", - "csrA" - ], - [ - "gene_synonym", - "GeneID:947176" - ], - [ - "gene_synonym", - "zfiA" - ], - [ - "gene_synonym", - "ECK2691" - ], - [ - "gene_synonym", - "NP_417176.1" - ] - ], - "dna_sequence": "ATGCTGATTCTGACTCGTCGAGTTGGTGAGACCCTCATGATTGGGGATGAGGTCACCGTGACAGTTTTAGGGGTAAAGGGCAACCAGGTACGTATTGGCGTAAATGCCCCGAAGGAAGTTTCTGTTCACCGTGAAGAGATCTACCAGCGTATCCAGGCTGAAAAATCCCAGCAGTCCAGTTACTAA", - "dna_sequence_length": 186, - "functions": [ - "pleiotropic regulatory protein for carbon source metabolism" - ], - "id": "CDS_2659", - "location": [ - [ - "NC_000913", - 2819146, - "-", - 186 - ] - ], - "md5": "575957ef32f45516e642e916f081e8bb", - "parent_gene": "", - "protein_md5": "fc4f077eb268a92f29017fcaaedd8fa3", - "protein_translation": "MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKSQQSSY", - "protein_translation_length": 61, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2667" - ], - [ - "gene_synonym", - "lovB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00957" - ], - [ - "gene_synonym", - "b2697" - ], - [ - "gene_synonym", - "ASAP:ABE-0008869" - ], - [ - "gene_synonym", - "GeneID:947175" - ], - [ - "gene_synonym", - "EcoGene:EG10034" - ], - [ - "gene_synonym", - "NP_417177.1" - ], - [ - "gene_synonym", - "alaS" - ], - [ - "gene_synonym", - "ala-act" - ], - [ - "gene_synonym", - "GI:16130604" - ], - [ - "gene_synonym", - "act" - ], - [ - "gene_synonym", - "ECK2692" - ] - ], - 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"ATGAGCAAGAGCACCGCTGAGATCCGTCAGGCGTTTCTCGACTTTTTCCATAGTAAGGGACATCAGGTAGTTGCCAGCAGCTCCCTGGTACCCCATAACGACCCAACTTTGTTGTTTACCAACGCCGGGATGAACCAGTTCAAGGATGTGTTCCTTGGGCTCGACAAGCGTAATTATTCCCGCGCTACCACTTCCCAACGCTGCGTGCGTGCGGGTGGTAAACACAACGACCTGGAAAACGTCGGTTACACCGCGCGTCACCATACCTTCTTCGAAATGCTGGGCAACTTCAGCTTCGGCGACTATTTCAAACACGATGCCATTCAGTTTGCATGGGAACTGCTGACCAGCGAAAAATGGTTTGCCCTGCCGAAAGAGCGTCTGTGGGTTACCGTCTATGAAAGCGACGACGAAGCCTACGAAATCTGGGAAAAAGAAGTAGGGATCCCGCGCGAACGTATTATTCGCATCGGCGATAACAAAGGTGCGCCATACGCATCTGACAACTTCTGGCAGATGGGTGACACTGGTCCGTGCGGCCCGTGCACCGAAATCTTCTACGATCACGGCGACCACATTTGGGGGGGCCCTCCGGGAAGCCCGGAAGAAGACGGCGACCGCTACATTGAGATCTGGAACATCGTCTTCATGCAGTTCAACCGCCAGGCCGATGGCACGATGGAACCGCTGCCGAAGCCGTCTGTAGATACCGGTATGGGTCTGGAGCGTATTGCTGCGGTGCTGCAACACGTTAACTCTAACTATGACATCGACCTGTTCCGCACGCTGATCCAGGCGGTAGCGAAAGTCACTGGCGCAACCGATCTGAGCAATAAATCGCTGCGCGTAATCGCTGACCACATTCGTTCTTGTGCGTTCCTGATCGCGGATGGCGTAATGCCGTCCAATGAAAACCGTGGTTATGTACTGCGTCGTATCATTCGTCGCGCAGTGCGTCACGGTAATATGCTCGGCGCGAAAGAAACCTTCTTCTACAAACTGGTTGGTCCGCTGATCGACGTTATGGGCTCTGCGGGTGAAGACCTGAAACGCCAGCAGGCGCAGGTTGAGCAGGTGCTGAAGACTGAAGAAGAGCAGTTTGCTCGTACTCTGGAGCGCGGTCTGGCGTTGCTGGATGAAGAGCTGGCAAAACTTTCTGGTGATACGCTGGATGGTGAAACTGCTTTCCGTCTGTACGACACCTATGGCTTCCCGGTTGACCTGACGGCTGATGTTTGTCGTGAGCGCAACATCAAAGTTGACGAAGCTGGTTTTGAAGCTGCAATGGAAGAGCAGCGTCGTCGCGCGCGCGAAGCCAGCGGCTTTGGTGCCGATTACAACGCAATGATCCGTGTTGACAGTGCATCTGAATTTAAAGGCTATGACCATCTGGAACTGAACGGCAAAGTGACTGCGCTGTTTGTTGATGGTAAAGCGGTTGATGCCATCAATGCAGGCCAGGAAGCTGTGGTCGTGCTGGATCAAACGCCATTCTATGCGGAATCCGGCGGTCAGGTTGGCGATAAAGGCGAACTGAAAGGCGCTAACTTCTCCTTTGCGGTGGAAGATACGCAGAAATACGGCCAGGCGATTGGTCACATCGGTAAACTTGCTGCGGGTTCTCTGAAAGTGGGCGACGCGGTGCAGGCTGATGTTGATGAGGCTCGTCGCGCCCGTATTCGTCTGAATCACTCCGCAACGCACCTGATGCACGCTGCGCTGCGCCAGGTTCTGGGTACTCATGTATCGCAGAAAGGTTCACTGGTTAACGACAAGGTGCTGCGCTTCGACTTCTCACACAACGAAGCGATGAAACCAGAAGAGATTCGTGCGGTCGAAGACCTGGTGAACACACAGATTCGTCGCAATTTGCCGATCGAAACCAACATCATGGATCTCGAAGCGGCGAAAGCGAAAGGTGCGATGGCGCTGTTCGGCGAGAAGTATGATGAGCGCGTACGCGTGCTGAGCATGGGCGATTTCTCTACCGAGTTGTGTGGCGGTACTCACGCCAGCCGCACTGGTGATATTGGTCTGTTCCGCATCATCTCTGAATCGGGTACTGCTGCAGGCGTTCGTCGTATCGAAGCGGTAACCGGAGAAGGTGCTATCGCCACCGTTCATGCAGACAGCGATCGCTTAAGCGAAGTCGCGCATCTGCTGAAAGGCGATAGCAATAATCTGGCTGATAAAGTGCGCTCAGTACTGGAACGTACGCGTCAGCTGGAAAAAGAGTTACAACAGCTTAAAGAACAAGCTGCCGCACAGGAGAGCGCAAATCTTTCCAGTAAGGCAATTGATGTTAATGGTGTTAAGCTGTTGGTTAGCGAGCTTAGCGGTGTTGAGCCGAAAATGTTGCGTACCATGGTTGACGATTTAAAAAATCAGCTGGGGTCGACAATTATCGTGCTGGCAACGGTAGTCGAAGGTAAGGTTTCTCTGATTGCAGGCGTATCTAAGGACGTCACAGATCGTGTGAAAGCAGGGGAACTGATTGGTATGGTCGCTCAGCAGGTGGGCGGCAAGGGTGGTGGACGTCCTGACATGGCGCAAGCCGGTGGTACGGATGCTGCGGCCTTACCTGCAGCGTTAGCCAGTGTGAAAGGCTGGGTCAGCGCGAAATTGCAATAA", 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"MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNLPIETNIMDLEAAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNNLADKVRSVLERTRQLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSGVEPKMLRTMVDDLKNQLGSTIIVLATVVEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTDAAALPAALASVKGWVSAKLQ", - "protein_translation_length": 876, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417178.1" - ], - [ - "gene_synonym", - "b2698" - ], - [ - "gene_synonym", - "GeneID:947172" - ], - [ - "gene_synonym", - "JW2668" - ], - [ - "gene_synonym", - "oraA" - ], - [ - "gene_synonym", - "recX" - ], - [ - "gene_synonym", - "ASAP:ABE-0008872" - ], - [ - "gene_synonym", - "GI:16130605" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33596" - ], - [ - "gene_synonym", - "EcoGene:EG12080" - ], - [ - "gene_synonym", - "ECK2693" - ] - ], - "dna_sequence": "ATGACAGAATCAACATCCCGTCGCCCGGCATATGCTCGCCTGTTGGATCGTGCGGTACGCATTCTGGCGGTGCGCGATCACAGTGAGCAAGAACTGCGACGTAAACTCGCGGCACCGATTATGGGCAAAAATGGCCCAGAAGAGATTGATGCTACGGCAGAAGATTACGAGCGCGTTATTGCCTGGTGCCATGAACATGGCTATCTCGATGACAGCCGATTTGTTGCGCGCTTTATCGCCAGCCGTAGCCGCAAAGGTTATGGACCTGCGCGTATTCGCCAGGAACTGAATCAGAAAGGTATTTCCCGCGAAGCGACAGAAAAAGCGATGCGTGAATGTGACATCGACTGGTGCGCACTGGCGCGCGATCAGGCGACGCGAAAATATGGCGAACCTTTGCCAACTGTCTTTTCAGAAAAAGTTAAGATCCAGCGTTTTCTGCTCTATCGTGGCTATCTGATGGAAGATATCCAGGAGATTTGGCGAAATTTTGCCGACTGA", - "dna_sequence_length": 501, - "functions": [ - "regulatory protein for RecA" - ], - "id": "CDS_2661", - "location": [ - [ - "NC_000913", - 2822639, - "-", - 501 - ] - ], - "md5": "71699ca22b16207059e6140d2179bcd4", - "parent_gene": "", - "protein_md5": "dbbc5589e4fed0bf83fb03dea135e004", - "protein_translation": "MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQEIWRNFAD", - "protein_translation_length": 166, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "recH" - ], - [ - "gene_synonym", - "ASAP:ABE-0008876" - ], - [ - "gene_synonym", - "srf" - ], - [ - "gene_synonym", - "rnmB" - ], - [ - "gene_synonym", - "EcoGene:EG10823" - ], - [ - "gene_synonym", - "b2699" - ], - [ - "gene_synonym", - "recA" - ], - [ - "gene_synonym", - "JW2669" - ], - [ - "gene_synonym", - "umuB" - ], - [ - "gene_synonym", - "zab" - ], - [ - "gene_synonym", - "NP_417179.1" - ], - [ - "gene_synonym", - "GeneID:947170" - ], - [ - "gene_synonym", - "lexB" - ], - [ - "gene_synonym", - "GI:16130606" - ], - [ - "gene_synonym", - "tif" - ], - [ - "gene_synonym", - "ECK2694" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7G6" - ], - [ - "gene_synonym", - "umuR" - ] - ], - "dna_sequence": "ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATTGAGAAACAATTTGGTAAAGGCTCCATCATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACCATCTCTACCGGTTCGCTTTCACTGGATATCGCGCTTGGGGCAGGTGGTCTGCCGATGGGCCGTATCGTCGAAATCTACGGACCGGAATCTTCCGGTAAAACCACGCTGACGCTGCAGGTGATCGCCGCAGCGCAGCGTGAAGGTAAAACCTGTGCGTTTATCGATGCTGAACACGCGCTGGACCCAATCTACGCACGTAAACTGGGCGTCGATATCGACAACCTGCTGTGCTCCCAGCCGGACACCGGCGAGCAGGCACTGGAAATCTGTGACGCCCTGGCGCGTTCTGGCGCAGTAGACGTTATCGTCGTTGACTCCGTGGCGGCACTGACGCCGAAAGCGGAAATCGAAGGCGAAATCGGCGACTCTCACATGGGCCTTGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAACACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTCGGTAACCCGGAAACCACTACCGGTGGTAACGCGCTGAAATTCTACGCCTCTGTTCGTCTCGACATCCGTCGTATCGGCGCGGTGAAAGAGGGCGAAAACGTGGTGGGTAGCGAAACCCGCGTGAAAGTGGTGAAGAACAAAATCGCTGCGCCGTTTAAACAGGCTGAATTCCAGATCCTCTACGGCGAAGGTATCAACTTCTACGGCGAACTGGTTGACCTGGGCGTAAAAGAGAAGCTGATCGAGAAAGCAGGCGCGTGGTACAGCTACAAAGGTGAGAAGATCGGTCAGGGTAAAGCGAATGCGACTGCCTGGCTGAAAGATAACCCGGAAACCGCGAAAGAGATCGAGAAGAAAGTACGTGAGTTGCTGCTGAGCAACCCGAACTCAACGCCGGATTTCTCTGTAGATGATAGCGAAGGCGTAGCAGAAACTAACGAAGATTTTTAA", - "dna_sequence_length": 1062, - "functions": [ - "DNA recombination and repair protein", - "ssDNA-dependent ATPase", - "synaptase", - "ssDNA and dsDNA binding protein", - "ATP-dependent homologous DNA strand exchanger", - "recombinase A", - "LexA autocleavage cofactor" - ], - "id": "CDS_2662", - "location": [ - [ - "NC_000913", - 2823769, - "-", - 1062 - ] - ], - "md5": "5dac5509f9801a4827b91167f641468b", - "parent_gene": "", - "protein_md5": "ff9f96d7f45619daca23a25a01e0c64d", - "protein_translation": "MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF", - "protein_translation_length": 353, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2700" - ], - [ - "gene_synonym", - "JW2670" - ], - [ - "gene_synonym", - "EcoGene:EG12698" - ], - [ - "gene_synonym", - "NP_417180.1" - ], - [ - "gene_synonym", - "pncC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6G3" - ], - [ - "gene_synonym", - "ygaD" - ], - [ - "gene_synonym", - "GI:16130607" - ], - [ - "gene_synonym", - "ECK2695" - ], - [ - "gene_synonym", - "ASAP:ABE-0008882" - ], - [ - "gene_synonym", - "GeneID:947169" - ] - ], - "dna_sequence": "ATGACTGACAGTGAACTGATGCAGTTAAGTGAACAGGTTGGGCAGGCGCTGAAAGCCCGTGGCGCAACCGTAACAACTGCCGAGTCTTGTACCGGTGGTTGGGTAGCGAAAGTGATTACCGATATTGCCGGTAGCTCCGCCTGGTTTGAACGCGGATTTGTCACCTACAGTAACGAAGCCAAAGCGCAGATGATCGGCGTACGCGAAGAGACGCTGGCGCAGCATGGCGCGGTGAGTGAACCCGTCGTGGTGGAAATGGCGATAGGCGCACTGAAAGCGGCTCGTGCTGATTATGCCGTGTCTATTAGTGGTATCGCCGGGCCGGATGGCGGCAGTGAAGAGAAGCCTGTCGGCACCGTCTGGTTTGCTTTTGCCACTGCCCGCGGTGAAGGCATTACCCGGCGGGAATGCTTCAGCGGCGACCGTGATGCGGTGCGTCGTCAGGCTACTGCGTATGCATTGCAGACCTTGTGGCAACAATTTCTACAAAACACTTGA", - "dna_sequence_length": 498, - "functions": [ - "nicotinamide-nucleotide amidohydrolase", - "NMN amidohydrolase" - ], - "id": "CDS_2663", - "location": [ - [ - "NC_000913", - 2824346, - "-", - 498 - ] - ], - "md5": "f623b1569a165e96fa4fd2e342b993a7", - "parent_gene": "", - "protein_md5": "7b2ac6818f57078c1087def2c187a208", - "protein_translation": "MTDSELMQLSEQVGQALKARGATVTTAESCTGGWVAKVITDIAGSSAWFERGFVTYSNEAKAQMIGVREETLAQHGAVSEPVVVEMAIGALKAARADYAVSISGIAGPDGGSEEKPVGTVWFAFATARGEGITRRECFSGDRDAVRRQATAYALQTLWQQFLQNT", - "protein_translation_length": 165, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12699" - ], - [ - "gene_synonym", - "JW2671" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P41052" - ], - [ - "gene_synonym", - "b2701" - ], - [ - "gene_synonym", - "NP_417181.1" - ], - [ - "gene_synonym", - "mltB" - ], - [ - "gene_synonym", - "ECK2696" - ], - [ - "gene_synonym", - "GI:16130608" - ], - [ - "gene_synonym", - "GeneID:947184" - ], - [ - "gene_synonym", - "ASAP:ABE-0008885" - ] - ], - "dna_sequence": "ATGTTCAAGCGTCGTTATGTAACATTGCTTCCCCTTTTTGTGTTGCTTGCCGCCTGTAGCAGCAAGCCAAAACCTACTGAGACTGATACGACCACCGGAACGCCGTCTGGCGGCTTCCTGCTTGAGCCGCAGCACAATGTGATGCAGATGGGCGGCGATTTCGCTAATAACCCGAATGCCCAGCAGTTCATCGACAAAATGGTGAACAAACACGGTTTCGATCGTCAGCAGTTGCAGGAAATTCTCTCCCAGGCGAAGCGTCTGGATTCGGTACTGCGGCTGATGGATAACCAGGCACCAACCACATCGGTGAAACCGCCATCAGGTCCGAACGGCGCATGGCTCCGTTATCGCAAAAAATTTATTACGCCGGACAACGTGCAGAACGGTGTGGTTTTCTGGAATCAGTATGAAGATGCGTTGAATCGCGCGTGGCAGGTGTATGGAGTACCGCCGGAAATTATCGTCGGGATTATCGGCGTTGAAACCCGCTGGGGGCGCGTGATGGGGAAAACTCGCATCCTCGATGCGCTGGCAACGCTGTCATTTAACTACCCACGCCGCGCGGAGTATTTCTCTGGCGAGCTGGAAACCTTCCTGTTGATGGCGCGCGACGAGCAGGACGATCCGCTCAATCTGAAAGGTTCCTTTGCCGGGGCGATGGGCTACGGACAGTTTATGCCGTCGTCTTACAAACAATATGCGGTAGATTTCAGCGGCGACGGGCATATCAACCTGTGGGATCCGGTTGATGCGATCGGTAGCGTGGCGAACTATTTCAAAGCGCACGGCTGGGTGAAAGGCGATCAGGTCGCGGTAATGGCAAACGGTCAGGCTCCAGGCTTGCCAAATGGCTTCAAAACTAAGTACAGCATTTCGCAGCTTGCCGCCGCAGGTTTAACGCCACAGCAGCCGCTGGGCAACCATCAACAAGCCAGCCTGCTGCGTCTGGATGTTGGCACCGGCTACCAGTACTGGTACGGTCTGCCGAACTTCTACACCATCACCCGTTACAACCACAGCACCCATTACGCAATGGCGGTCTGGCAGTTAGGACAAGCCGTGGCGCTGGCGCGAGTACAGTAG", - "dna_sequence_length": 1086, - "functions": [ - "membrane-bound lytic murein transglycosylase B" - ], - "id": "CDS_2664", - "location": [ - [ - "NC_000913", - 2825576, - "-", - 1086 - ] - ], - "md5": "8792d819408e7eded8384c4f8fda258c", - "parent_gene": "", - "protein_md5": "c11d1ffc7edcb1f8cbb5fca7d846ee02", - "protein_translation": "MFKRRYVTLLPLFVLLAACSSKPKPTETDTTTGTPSGGFLLEPQHNVMQMGGDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTTSVKPPSGPNGAWLRYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIGVETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFAGAMGYGQFMPSSYKQYAVDFSGDGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMANGQAPGLPNGFKTKYSISQLAAAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGQAVALARVQ", - "protein_translation_length": 361, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947575" - ], - [ - "gene_synonym", - "srlA" - ], - [ - "gene_synonym", - "b2702" - ], - [ - "gene_synonym", - "JW5429" - ], - [ - "gene_synonym", - "EcoGene:EG10969" - ], - [ - "gene_synonym", - "YP_026180.1" - ], - [ - "gene_synonym", - "GI:49176260" - ], - [ - "gene_synonym", - "ECK2697" - ], - [ - "gene_synonym", - "gutA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P56579" - ], - [ - "gene_synonym", - "sbl" - ], - [ - "gene_synonym", - "ASAP:ABE-0008890" - ] - ], - "dna_sequence": "ATGATAGAAACCATTACTCATGGTGCAGAGTGGTTTATCGGGCTGTTCCAAAAGGGCGGAGAGGTGTTTACCGGGATGGTGACCGGCATTCTTCCGCTGTTGATTAGCCTGCTGGTTATCATGAACGCACTGATTAATTTTATCGGTCAGCATCGTATTGAACGTTTTGCTCAACGTTGCGCCGGTAACCCTGTTTCCCGTTACCTACTGTTACCGTGCATTGGCACGTTTGTCTTTTGCAATCCGATGACCCTAAGCCTGGGTCGCTTTATGCCGGAAAAGTACAAACCCAGCTACTACGCGGCGGCCTCTTATAGCTGCCACTCAATGAATGGCCTCTTCCCCCATATCAACCCTGGCGAACTGTTTGTTTATCTTGGCATTGCCAGCGGTCTGACAACGCTGAACCTGCCACTTGGCCCACTGGCGGTGAGTTATCTGCTGGTTGGTCTGGTCACCAATTTCTTCCGCGGCTGGGTGACCGATCTGACCACCGCCATTTTTGAGAAAAAGATGGGCATTCAACTTGAACAAAAAGTTCACCTGGCAGGAGCAACATCATGA", - "dna_sequence_length": 564, - "functions": [ - "glucitol/sorbitol-specific enzyme IIC component of PTS" - ], - "id": "CDS_2665", - "location": [ - [ - "NC_000913", - 2825832, - "+", - 564 - ] - ], - "md5": "5ce716ffffc079379a3c8fddb191c42f", - "parent_gene": "", - "protein_md5": "4a70a70c7fd75c55a1af29243bd9692c", - "protein_translation": "MIETITHGAEWFIGLFQKGGEVFTGMVTGILPLLISLLVIMNALINFIGQHRIERFAQRCAGNPVSRYLLLPCIGTFVFCNPMTLSLGRFMPEKYKPSYYAAASYSCHSMNGLFPHINPGELFVYLGIASGLTTLNLPLGPLAVSYLLVGLVTNFFRGWVTDLTTAIFEKKMGIQLEQKVHLAGATS", - "protein_translation_length": 187, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "srlA" - ], - [ - "gene_synonym", - "b2703" - ], - [ - "gene_synonym", - "srlE" - ], - [ - "gene_synonym", - "GeneID:948933" - ], - [ - "gene_synonym", - "EcoGene:EG14373" - ], - [ - "gene_synonym", - "GI:49176261" - ], - [ - "gene_synonym", - "JW5430" - ], - [ - "gene_synonym", - "YP_026181.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008892" - ], - [ - "gene_synonym", - "ECK2698" - ], - [ - "gene_synonym", - "gutA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P56580" - ], - [ - "gene_synonym", - "gutE" - ], - [ - "gene_synonym", - "sbl" - ] - ], - "dna_sequence": "ATGACGCATATTCGGATCGAAAAAGGAACGGGTGGCTGGGGCGGCCCGCTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGGAAATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGGCGCAGTACATTGTGGAAGATATTTATGTCTCTGGCGTAAAAGAAGAAAACATCACTGTAGTAGGTGATGCGACACCACAACCCTCTTCCGTGGGCCGTGACTATGACACCAGTAAGAAAATCACCGAACAAAGCGATGGTTTACTGGCGAAGGTGGGAATGGGCATGGGGTCCACCGTTGCGGTGCTGTTTCAATCTGGTCGTGACACCATCGACACTGTATTAAAAACCATTCTGCCGTTTATGGCATTCGTCTCGGCGCTCATTGGCATCATTATGGCTTCTGGCCTTGGTGACTGGATTGCCCACGGTCTTGCTCCGCTGGCGAGCCATCCACTGGGTCTGGTCATGCTGGCGCTCATCTGTTCCTTCCCACTGCTTTCACCTTTCCTCGGCCCAGGCGCAGTTATCGCACAGGTTATCGGCGTATTGATTGGCGTGCAGATTGGTCTCGGCAATATTCCGCCGCATCTGGCTTTACCGGCACTGTTTGCCATCAACGCGCAGGCGGCCTGCGACTTCATCCCGGTCGGTTTGTCGCTGGCGGAAGCCCGTCAGGACACGGTTCGCGTCGGTGTCCCTTCTGTACTGGTGAGCCGCTTTTTAACCGGCGCGCCGACTGTACTGATCGCCTGGTTTGTCTCCGGTTTTATCTATCAATAG", - "dna_sequence_length": 960, - "functions": [ - "glucitol/sorbitol-specific enzyme IIB component of PTS" - ], - "id": "CDS_2666", - "location": [ - [ - "NC_000913", - 2826392, - "+", - 960 - ] - ], - "md5": "7969892bc529ee56128f27fa719d356f", - "parent_gene": "", - "protein_md5": "46cb054f679a0d65fafe09a8fcea5404", - "protein_translation": "MTHIRIEKGTGGWGGPLELKATPGKKIVYITAGTRPAIVDKLAQLTGWQAIDGFKEGEPAEAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQYIVEDIYVSGVKEENITVVGDATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSTVAVLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLALICSFPLLSPFLGPGAVIAQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPVGLSLAEARQDTVRVGVPSVLVSRFLTGAPTVLIAWFVSGFIYQ", - "protein_translation_length": 319, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10970" - ], - [ - "gene_synonym", - "srlB" - ], - [ - "gene_synonym", - "b2704" - ], - [ - "gene_synonym", - "JW2673" - ], - [ - "gene_synonym", - "NP_417184.1" - ], - [ - "gene_synonym", - "ECK2699" - ], - [ - "gene_synonym", - "GeneID:948971" - ], - [ - "gene_synonym", - "gutB" - ], - [ - "gene_synonym", - "ASAP:ABE-0008894" - ], - [ - "gene_synonym", - "GI:16130611" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05706" - ] - ], - "dna_sequence": "ATGACCGTTATTTATCAGACCACCATCACCCGTATCGGCGCGAGTGCCATTGACGCCCTCAGTGACCAGATGCTCATCACCTTTCGTGAAGGCGCGCCTGCGGACCTCGAAGAGTATTGCTTCATTCATTGCCACGGCGAGTTGAAAGGTGCACTCCATCCCGGTTTGCAATTTTCACTCGGGCAGCATCGCTATCCGGTGACCGCTGTTGGCAGCGTGGCGGAAGACAACCTTCGCGAACTGGGTCATGTCACCCTGCGCTTCGATGGTTTAAACGAAGCGGAATTTCCGGGCACTGTCCATGTGGCAGGCCCTGTCCCCGACGATATCGCGCCGGGATCGGTTTTGAAGTTTGAATCTGTTAAGGAGTAA", - "dna_sequence_length": 372, - "functions": [ - "glucitol/sorbitol-specific enzyme IIA component of PTS" - ], - "id": "CDS_2667", - "location": [ - [ - "NC_000913", - 2827362, - "+", - 372 - ] - ], - "md5": "6a08945d9e1387552289ac8147c53156", - "parent_gene": "", - "protein_md5": "16d6a44a03a4bbd3101e54c8b65efb7f", - "protein_translation": "MTVIYQTTITRIGASAIDALSDQMLITFREGAPADLEEYCFIHCHGELKGALHPGLQFSLGQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHVAGPVPDDIAPGSVLKFESVKE", - "protein_translation_length": 123, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10971" - ], - [ - "gene_synonym", - "JW2674" - ], - [ - "gene_synonym", - "b2705" - ], - [ - "gene_synonym", - "srlD" - ], - [ - "gene_synonym", - "NP_417185.1" - ], - [ - "gene_synonym", - "GeneID:948937" - ], - [ - "gene_synonym", - "ASAP:ABE-0008896" - ], - [ - "gene_synonym", - "gutD" - ], - [ - "gene_synonym", - "ECK2700" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05707" - ], - [ - "gene_synonym", - "GI:16130612" - ] - ], - "dna_sequence": "ATGAATCAGGTTGCCGTTGTCATCGGTGGTGGGCAAACCTTAGGCGCGTTCCTGTGCCACGGTCTGGCTGCCGAGGGGTATCGCGTCGCGGTTGTCGATATTCAGAGCGACAAAGCCGCAAATGTGGCACAAGAAATTAACGCCGAATATGGTGAAAGTATGGCGTACGGTTTTGGTGCTGACGCCACTAGCGAGCAAAGCGTTCTGGCGCTCTCTCGTGGGGTAGATGAAATCTTTGGTCGCGTGGATTTGCTGGTCTACAGCGCCGGAATAGCAAAAGCAGCCTTTATCAGCGACTTCCAGCTCGGCGATTTTGACCGTTCGCTACAGGTGAATCTGGTGGGTTATTTCCTGTGTGCGCGTGAATTTTCGCGTTTGATGATCCGCGACGGGATTCAGGGGCGCATTATTCAGATCAACTCGAAATCCGGCAAAGTGGGCAGCAAACACAACTCTGGCTACAGCGCAGCGAAATTTGGTGGCGTCGGGCTGACTCAATCACTGGCGCTGGATCTGGCGGAGTACGGCATTACGGTGCATTCACTGATGCTCGGTAACCTGCTGAAATCGCCGATGTTCCAGTCACTGTTGCCACAATACGCGACCAAGCTGGGTATCAAACCGGATCAAGTCGAGCAGTATTACATCGACAAAGTACCGCTCAAACGCGGCTGCGATTATCAAGATGTGCTGAATATGCTGCTGTTCTACGCCAGTCCTAAGGCGTCGTACTGCACCGGACAGTCGATCAATGTCACCGGCGGTCAGGTGATGTTCTGA", - "dna_sequence_length": 780, - "functions": [ - "sorbitol-6-phosphate dehydrogenase" - ], - "id": "CDS_2668", - "location": [ - [ - "NC_000913", - 2827737, - "+", - 780 - ] - ], - "md5": "a33ae1d65c4625d8afe1e8f1f058737c", - "parent_gene": "", - "protein_md5": "9e97efd3d0b0906c6c7b160e25b92b4c", - "protein_translation": "MNQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF", - "protein_translation_length": 259, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2706" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15081" - ], - [ - "gene_synonym", - "JW2675" - ], - [ - "gene_synonym", - "NP_417186.1" - ], - [ - "gene_synonym", - "GeneID:948938" - ], - [ - "gene_synonym", - "EcoGene:EG10972" - ], - [ - "gene_synonym", - "srlM" - ], - [ - "gene_synonym", - "gutM" - ], - [ - "gene_synonym", - "ASAP:ABE-0008898" - ], - [ - "gene_synonym", - "ECK2701" - ], - [ - "gene_synonym", - "GI:16130613" - ] - ], - "dna_sequence": "ATGGTATCCGCACTCATCACCGTCGCCGTTATCGCCTGGTGTGCGCAACTGGCCTTAGGCGGCTGGCAAATTTCTCGTTTTAACCGTGCCTTCGACACACTATGCCAGCAAGGGCGGGTTGGCGTGGGCCGTTCCAGCGGGCGCTTTAAACCGCGGGTCGTGGTCGCCATCGCGCTGGACGATCAGCAGCGCATCGTCGACACCTTGTTTATGAAAGGACTGACCGTCTTCGCCCGACCGCAAAAAATTCCCGCAATTACCGGTATGCATGCGGGTGATTTACAGCCCGATGTGATCTTTCCCCATGATCCACTATCACAGAATGCTCTATCATTGGCGCTTAAACTGAAACGTGGATAA", - "dna_sequence_length": 360, - "functions": [ - "sorbitol=responsive srl operon transcriptional activator" - ], - "id": "CDS_2669", - "location": [ - [ - "NC_000913", - 2828621, - "+", - 360 - ] - ], - "md5": "979b4178eee686fff15eaa6d8455ed66", - "parent_gene": "", - "protein_md5": "a2d189749af6d11797f208916dc8dacd", - "protein_translation": "MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGRSSGRFKPRVVVAIALDDQQRIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIFPHDPLSQNALSLALKLKRG", - "protein_translation_length": 119, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2676" - ], - [ - "gene_synonym", - "b2707" - ], - [ - "gene_synonym", - "NP_417187.1" - ], - [ - "gene_synonym", - "EcoGene:EG10974" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15082" - ], - [ - "gene_synonym", - "gutR" - ], - [ - "gene_synonym", - "srlR" - ], - [ - "gene_synonym", - "GeneID:948942" - ], - [ - "gene_synonym", - "GI:16130614" - ], - [ - "gene_synonym", - "ASAP:ABE-0008900" - ], - [ - "gene_synonym", - "ECK2702" - ] - ], - "dna_sequence": "ATGAAACCTCGTCAGCGTCAGGCCGCCATTCTGGAGTATCTGCAAAAGCAGGGTAAATGCTCGGTTGAAGAATTGGCGCAATACTTTGACACCACAGGCACAACCATTCGCAAAGATCTGGTCATTCTGGAACATGCCGGAACCGTCATTCGTACTTATGGCGGAGTGGTGTTGAATAAAGAGGAATCCGATCCGCCTATCGATCATAAAACACTCATCAACACCCACAAGAAAGAGCTGATTGCAGAAGCTGCCGTTAGTTTTATCCATGATGGCGATTCGATCATTCTTGATGCTGGCAGTACCGTTTTGCAGATGGTTCCCCTGCTCTCGCGCTTTAATAACATCACGGTGATGACCAACAGCCTGCATATCGTCAATGCGCTATCCGAACTGGATAACGAACAAACTATCCTGATGCCAGGCGGAACGTTTCGCAAAAAATCGGCCTCATTTCACGGGCAACTGGCAGAGAATGCCTTCGAGCATTTCACCTTCGATAAATTGTTTATGGGCACCGACGGCATCGATCTCAATGCGGGCGTAACCACCTTTAACGAGGTTTATACCGTCAGTAAGGCAATGTGCAATGCCGCGCGCGAAGTGATTTTGATGGCGGACTCATCAAAGTTTGGCCGTAAAAGCCCCAACGTAGTTTGCAGTCTTGAAAGCGTCGATAAGCTGATTACCGACGCAGGTATCGATCCGGCGTTTCGTCAGGCGCTGGAAGAGAAAGGGATCGATGTGATCATAACCGGAGAGAGCAATGAGTGA", - "dna_sequence_length": 774, - "functions": [ - "sorbitol-inducible srl operon transcriptional repressor" - ], - "id": "CDS_2670", - "location": [ - [ - "NC_000913", - 2829047, - "+", - 774 - ] - ], - "md5": "979455c265358ad0e695ae50685cfac4", - "parent_gene": "", - "protein_md5": "d8d0322f11a1f10f81fdf876adf44f1d", - "protein_translation": "MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGSTVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENAFEHFTFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE", - "protein_translation_length": 257, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17115" - ], - [ - "gene_synonym", - "EcoGene:EG10973" - ], - [ - "gene_synonym", - "NP_417188.4" - ], - [ - "gene_synonym", - "gutQ" - ], - [ - "gene_synonym", - "GeneID:947587" - ], - [ - "gene_synonym", - "JW5431" - ], - [ - "gene_synonym", - "b2708" - ], - [ - "gene_synonym", - "srlQ" - ], - [ - "gene_synonym", - "GI:90111480" - ], - [ - "gene_synonym", - "ECK2703" - ], - [ - "gene_synonym", - "ASAP:ABE-0008902" - ] - ], - "dna_sequence": "ATGAGTGAAGCACTACTGAACGCGGGACGTCAGACGTTAATGCTGGAGTTGCAGGAAGCAAGCCGTTTACCGGAACGTCTGGGCGATGATTTTGTTCGCGCCGCCAATATCATCCTGCACTGTGAAGGCAAAGTGGTGGTTTCGGGAATTGGCAAATCGGGCCACATTGGTAAGAAAATCGCCGCAACGCTTGCCAGTACCGGCACTCCGGCTTTTTTTGTCCATCCGGCAGAAGCGCTGCACGGCGATCTGGGGATGATCGAAAGCCGCGATGTGATGCTGTTTATCTCTTACTCCGGTGGCGCGAAGGAACTGGATCTGATTATTCCGCGTCTGGAAGATAAATCTATCGCGCTGCTGGCGATGACCGGCAAACCGACGTCACCGCTGGGCCTGGCGGCAAAAGCGGTGCTGGATATCTCCGTAGAACGCGAAGCCTGCCCGATGCACCTTGCGCCGACCTCCAGCACCGTCAATACCCTGATGATGGGTGACGCGCTGGCGATGGCGGTCATGCAGGCGCGCGGATTTAATGAAGAAGATTTTGCCCGCTCCCACCCAGCCGGGGCACTGGGCGCTCGCTTGCTGAATAAAGTGCATCATCTGATGCGCCGTGACGATGCCATCCCACAGGTGGCGTTAACCGCCAGCGTGATGGATGCGATGCTGGAACTCAGCCGCACCGGTCTGGGGCTGGTGGCGGTATGTGACGCTCAACAACAGGTACAAGGCGTCTTTACCGACGGCGATTTACGTCGCTGGCTGGTTGGCGGCGGCGCACTCACCACGCCAGTCAATGAAGCGATGACGGTCGGCGGCACCACGTTGCAATCGCAAAGTCGCGCCATCGACGCCAAAGAGATCCTGATGAAGCGCAAAATCACTGCCGCACCGGTGGTGGATGAAAACGGCAAACTCACCGGCGCAATAAACCTGCAGGATTTCTATCAGGCCGGGATTATTTAA", - "dna_sequence_length": 966, - "functions": [ - "D-arabinose 5-phosphate isomerase" - ], - "id": "CDS_2671", - "location": [ - [ - "NC_000913", - 2829813, - "+", - 966 - ] - ], - "md5": "21c13d4eb29f6b2b15bde5c9a0248866", - "parent_gene": "", - "protein_md5": "449dd5c046c85ec2a6031e6d612a4336", - "protein_translation": "MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGII", - "protein_translation_length": 321, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "norR" - ], - [ - "gene_synonym", - "EcoGene:EG12108" - ], - [ - "gene_synonym", - "ygaA" - ], - [ - "gene_synonym", - "NP_417189.2" - ], - [ - "gene_synonym", - "b2709" - ], - [ - "gene_synonym", - "GI:90111481" - ], - [ - "gene_synonym", - "JW5843" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37013" - ], - [ - "gene_synonym", - "ASAP:ABE-0008904" - ], - [ - "gene_synonym", - "ECK2704" - ], - [ - "gene_synonym", - "GeneID:947186" - ] - ], - "dna_sequence": "ATGAGTTTTTCCGTTGATGTGCTGGCGAATATCGCCATCGAATTGCAGCGTGGGATTGGTCACCAGGATCGTTTTCAGCGCCTGATCACCACGCTACGTCAGGTGCTGGAGTGCGATGCGTCTGCGTTGCTACGTTACGATTCGCGGCAGTTTATTCCGCTTGCCATCGACGGTCTGGCAAAGGATGTACTCGGTAGACGCTTTGCGCTGGAAGGGCATCCACGGCTGGAAGCGATTGCCCGCGCCGGGGATGTGGTGCGCTTTCCCGCAGACAGCGAATTGCCCGATCCCTATGACGGTTTGATTCCTGGGCAGGAGAGTCTGAAGGTTCACGCCTGCGTTGGTCTGCCATTGTTTGCCGGGCAAAACCTGATCGGCGCACTGACGCTCGACGGGATGCAGCCCGATCAGTTCGATGTTTTCAGCGACGAAGAGCTACGGCTGATTGCTGCGCTGGCGGCGGGAGCGTTAAGCAATGCGTTGCTGATTGAACAACTGGAAAGCCAGAATATGCTGCCAGGCGATGCCACGCCGTTTGAAGCGGTGAAACAGACGCAGATGATTGGCTTGTCCCCTGGCATGACGCAACTGAAAAAAGAGATTGAGATTGTGGCGGCGTCCGATCTCAACGTCCTGATCAGCGGTGAGACTGGAACCGGTAAGGAGCTGGTGGCGAAAGCGATTCATGAAGCCTCGCCACGGGCGGTGAATCCGCTGGTCTATCTCAACTGTGCTGCACTGCCGGAAAGTGTGGCGGAAAGTGAGTTGTTCGGGCATGTGAAAGGAGCGTTTACTGGCGCTATCAGTAATCGCAGCGGGAAGTTTGAAATGGCGGATAACGGCACGCTGTTTCTGGATGAGATCGGCGAGTTGTCGTTGGCATTGCAGGCCAAGCTGCTGAGGGTGTTGCAGTATGGCGATATTCAGCGCGTTGGCGATGACCGTTGTTTGCGGGTCGATGTGCGCGTGCTGGCGGCGACTAACCGCGATTTACGCGAAGAGGTGCTGGCAGGGCGATTCCGCGCCGATTTGTTTCATCGCCTGAGCGTGTTTCCACTTTCGGTGCCGCCGCTGCGTGAGCGGGGCGATGATGTCATTCTGCTGGCGGGGTATTTCTGCGAGCAGTGTCGTTTGCGGCAGGGGCTCTCCCGCGTGGTATTAAGTGCCGGAGCGCGAAATTTACTGCAACACTACAGTTTTCCGGGAAACGTGCGCGAACTGGAACATGCTATTCATCGGGCGGTAGTTCTGGCGAGAGCCACCCGCAGCGGCGATGAAGTGATTCTTGAGGCGCAACATTTTGCTTTTCCTGAGGTGACGTTGCCGACGCCAGAAGTGGCGGCGGTGCCCGTTGTTAAGCAAAACCTGCGTGAAGCGACAGAAGCGTTCCAGCGTGAAACTATTCGTCAGGCACTGGCACAAAATCATCACAACTGGGCTGCCTGCGCGCGGATGCTGGAAACCGACGTCGCCAACCTGCATCGGCTGGCGAAACGTCTGGGATTGAAGGATTAA", - "dna_sequence_length": 1515, - "functions": [ - "anaerobic nitric oxide reductase DNA-binding transcriptional activator" - ], - "id": "CDS_2672", - "location": [ - [ - "NC_000913", - 2832289, - "-", - 1515 - ] - ], - "md5": "c186badc8099f78b2fc5946859d63e46", - "parent_gene": "", - "protein_md5": "63f92f773c1520e906b7854d4c930c91", - "protein_translation": "MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALLRYDSRQFIPLAIDGLAKDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMLPGDATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRCLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRQGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHRAVVLARATRSGDEVILEAQHFAFPEVTLPTPEVAAVPVVKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGLKD", - "protein_translation_length": 504, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygaK" - ], - [ - "gene_synonym", - "ygaJ" - ], - [ - "gene_synonym", - "ygaI" - ], - [ - "gene_synonym", - "norV" - ], - [ - "gene_synonym", - "NP_417190.1" - ], - [ - "gene_synonym", - "EcoGene:EG12963" - ], - [ - "gene_synonym", - "JW2680" - ], - [ - "gene_synonym", - "flrd" - ], - [ - "gene_synonym", - "ECK2705" - ], - [ - "gene_synonym", - "GeneID:948979" - ], - [ - "gene_synonym", - "GI:16130617" - ], - [ - "gene_synonym", - "ASAP:ABE-0008910" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46877" - ], - [ - "gene_synonym", - "b2710" - ] - ], - "dna_sequence": "ATGTCTATTGTGGTGAAAAATAACATTCATTGGGTTGGTCAACGTGACTGGGAAGTGCGTGATTTTCACGGCACGGAATATAAAACGCTGCGCGGCAGCAGCTACAATAGCTACCTCATCCGCGAAGAAAAAAACGTGCTGATCGACACCGTCGACCATAAATTCAGCCGCGAATTTGTGCAGAACCTGCGTAATGAAATCGATCTGGCGGATATCGATTACATCGTGATTAACCATGCAGAAGAGGACCACGCTGGGGCGCTGACCGAACTGATGGCACAAATTCCCGATACGCCGATCTACTGTACAGCCAACGCTATCGACTCGATAAATGGTCATCACCATCATCCGGAGTGGAATTTTAATGTGGTGAAAACTGGCGACACGCTGGATATCGGCAACGGCAAACAGCTCATTTTTGTCGAAACACCAATGCTGCACTGGCCGGACAGCATGATGACTTACCTGACAGGCGACGCGGTGCTGTTCAGTAACGATGCTTTCGGTCAACACTACTGCGACGAGCATCTGTTCAACGATGAAGTGGATCAGACGGAGCTTTTCGAGCAGTGCCAGCGTTACTACGCCAATATCCTGACGCCGTTCAGCCGCCTGGTAACACCGAAAATTACCGAGATCCTGGGCTTTAACTTACCAGTCGATATGATAGCCACTTCCCACGGCGTGGTATGGCGCGATAACCCGACGCAAATTGTCGAGCTGTACCTGAAATGGGCGGCTGATTATCAGGAAGACAGAATCACCATTTTCTACGACACCATGTCGAATAACACCCGCATGATGGCTGACGCTATCGCCCAGGGGATTGCGGAAACCGACCCACGCGTGGCGGTGAAAATTTTCAACGTCGCCCGAAGCGATAAAAACGAAATCCTGACTAATGTCTTCCGCTCAAAAGGCGTGCTGGTCGGCACTTCGACGATGAATAACGTGATGATGCCGAAAATCGCCGGGCTGGTGGAGGAGATGACTGGTTTACGCTTCCGTAACAAACGCGCCAGTGCTTTCGGCTCTCACGGCTGGAGCGGCGGTGCGGTGGATCGTCTTTCCACGCGCCTGCAGGATGCGGGTTTCGAAATGTCGCTTAGCCTGAAAGCGAAATGGCGACCAGACCAGGACGCTCTGAAGTTATGCCGTGAACACGGTCGCGAAATCGCCCGTCAGTGGGCGCTCGCGCCGCTGCCGCAGAGCACGGTGAATACGGTAGTTAAAGAAGAAACCTCTGCCACCACGACGGCTGACCTCGGCCCACGGATGCAGTGCAGCGTCTGCCAGTGGATTTACGATCCGGCAAAAGGCGAGCCAATGCAGGACGTTGCGCCAGGAACGCCGTGGAGTGAAGTCCCGGATAACTTCCTCTGCCCGGAATGCTCCCTCGGCAAAGACGTCTTTGAAGAACTGGCATCGGAGGCAAAATGA", 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"GeneID:947088" - ], - [ - "gene_synonym", - "JW2681" - ], - [ - "gene_synonym", - "ygbD" - ], - [ - "gene_synonym", - "GI:16130618" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37596" - ], - [ - "gene_synonym", - "ASAP:ABE-0008912" - ], - [ - "gene_synonym", - "norW" - ], - [ - "gene_synonym", - "NP_417191.1" - ], - [ - "gene_synonym", - "ECK2706" - ], - [ - "gene_synonym", - "EcoGene:EG12450" - ] - ], - "dna_sequence": "ATGAGTAACGGCATTGTGATCATCGGTTCGGGCTTCGCCGCCCGCCAACTGGTGAAAAATATTCGCAAACAGGACGCCACTATTCCATTAACCCTGATTGCCGCCGACAGCATGGATGAGTACAACAAACCTGACCTCAGCCATGTTATCAGTCAGGGGCAACGTGCCGATGACCTTACCCGCCAGACGGCGGGTGAATTTGCCGAGCAGTTTAATCTGCACCTGTTTCCACAAACCTGGGTGACGGATATCGATGCCGAAGCCCGTGTGGTGAAAAGCCAGAATAATCAGTGGCAATACGACAAGCTAGTACTGGCAACCGGTGCCAGTGCCTTTGTCCCGCCTGTGCCTGGGCGTGAGTTAATGCTGACGTTAAATAGTCAGCAAGAGTATCGCGCCTGTGAAACGCAACTGCGGGATGCCCGACGCGTGTTGATTGTTGGCGGTGGTTTGATTGGTAGCGAACTGGCGATGGATTTTTGTCGTGCAGGCAAAGCGGTCACGCTAATCGACAACGCTGCCAGTATTCTGGCGTCGTTAATGCCACCGGAAGTAAGCAGCCGCTTGCAGCATCGGTTGACGGAGATGGGCGTTCATCTGCTGTTGAAATCTCAGTTACAGGGGCTGGAAAAAACGGATTCTGGCATTCAGGCAACGCTGGACCGCCAGCGCAATATCGAAGTGGATGCGGTAATTGCCGCCACCGGACTGCGCCCGGAAACCGCCCTGGCACGACGCGCCGGGCTGACGATTAATCGCGGCGTTTGCGTCGATAGTTATCTGCAAACCAGTAATACCGATATTTACGCGCTGGGCGATTGCGCGGAAATTAACGGTCAGGTATTGCCGTTCCTCCAGCCGATTCAACTTAGCGCGATGGTGCTGGCAAAAAATCTTCTCGGCAATAACACGCCGCTGAAACTCCCGGCGATGCTGGTGAAAATCAAAACGCCGGAATTACCGCTGCATCTGGCAGGCGAAACCCAGCGTCAGGATTTACGCTGGCAAATTAATACCGAACGCCAGGGAATGGTGGCGCGCGGCGTTGACGATGCTGACCAGCTTCGCGCCTTTGTGGTCAGTGAGGATCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAG", - "dna_sequence_length": 1134, - "functions": [ - "NADH:flavorubredoxin oxidoreductase" - ], - "id": "CDS_2674", - "location": [ - [ - "NC_000913", - 2833912, - "+", - 1134 - ] - ], - "md5": "41aacfdb36a3039d3607616a816a6fde", - "parent_gene": "", - "protein_md5": "97f73d52060066e079261745cc3fc887", - "protein_translation": "MSNGIVIIGSGFAARQLVKNIRKQDATIPLTLIAADSMDEYNKPDLSHVISQGQRADDLTRQTAGEFAEQFNLHLFPQTWVTDIDAEARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEYRACETQLRDARRVLIVGGGLIGSELAMDFCRAGKAVTLIDNAASILASLMPPEVSSRLQHRLTEMGVHLLLKSQLQGLEKTDSGIQATLDRQRNIEVDAVIAATGLRPETALARRAGLTINRGVCVDSYLQTSNTDIYALGDCAEINGQVLPFLQPIQLSAMVLAKNLLGNNTPLKLPAMLVKIKTPELPLHLAGETQRQDLRWQINTERQGMVARGVDDADQLRAFVVSEDRMKEAFGLLKTLPM", - "protein_translation_length": 377, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:944963" - ], - [ - "gene_synonym", - "EcoGene:EG11551" - ], - [ - "gene_synonym", - "b2712" - ], - [ - "gene_synonym", - "JW5433" - ], - [ - "gene_synonym", - "hydA" - ], - [ - "gene_synonym", - "GI:16130619" - ], - [ - "gene_synonym", - "NP_417192.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30131" - ], - [ - "gene_synonym", - "ECK2707" - ], - [ - "gene_synonym", - "hypF" - ], - [ - "gene_synonym", - "ASAP:ABE-0008915" - ] - ], - "dna_sequence": "ATGGCAAAAAACACATCTTGCGGTGTCCAACTGCGTATTCGTGGCAAAGTGCAGGGCGTCGGTTTTCGTCCGTTTGTCTGGCAGCTGGCACAGCAATTAAATCTTCACGGCGATGTCTGTAATGACGGCGATGGCGTAGAAGTCCGGCTGCGGGAAGACCCGGAAACGTTTCTTGTTCAATTGTATCAGCACTGCCCGCCGCTGGCGCGTATTGATAGCGTCGAGCGTGAGCCGTTTATCTGGTCACAACTGCCCACCGAGTTCACTATACGCCAGAGCACAGGCGGCACCATGAATACGCAAATTGTTCCCGATGCCGCTACTTGCCCTGCTTGCCTTGCCGAAATGAATACCCCAGGCGAACGGCGTTATCGTTATCCGTTTATCAACTGTACCCACTGCGGCCCGCGTTTCACCATTATTCGCGCCATGCCTTACGACCGCCCGTTTACCGTGATGGCGGCGTTTCCGCTATGTCCGGCCTGTGACAAAGAGTACCGTGACCCGCTCGATCGTCGCTTCCACGCCCAGCCGGTGGCCTGCCCGGAGTGTGGCCCGCATCTTGAATGGGTAAGTCATGGTGAACATGCGGAACAAGAGGCGGCATTACAGGCAGCTATCGCACAGTTAAAAATGGGCAAAATTGTCGCCATCAAAGGGATTGGCGGATTTCATCTTGCCTGCGATGCACGTAACAGTAACGCGGTGGCGACACTTCGGGCGCGCAAACATCGCCCGGCGAAACCGCTGGCGGTCATGTTGCCAGTGGCTGACGGTTTACCAGACGCTGCGCGCCAGTTGCTTACCACGCCCGCCGCGCCGATTGTGCTGGTGGATAAAAAATACGTTCCTGAGCTTTGTGATGATATCGCCCCTGACCTTAACGAAGTCGGGGTAATGTTGCCTGCGAACCCGCTCCAGCATTTGCTGTTACAGGAACTGCAATGCCCGCTGGTGATGACCTCCGGCAACCTGAGCGGTAAACCACCAGCTATCAGCAACGAACAGGCGCTGGCGGATTTGCAGGGCATTGCCGACGGATTCTTGATACATAACCGCGACATCGTGCAGCGGATGGATGATTCGGTGGTGCGCGAAAGCGGCGAAATGCTGCGCCGTTCGCGGGGGTATGTGCCGGATGCGCTGGCTTTGCCTCCGGGCTTTAAAAATGTTCCGCCTGTGCTGTGTCTCGGCGCGGATCTGAAAAATACCTTCTGCCTGGTGCGCGGTGAACAAGCGGTGTTGAGTCAGCATCTGGGCGATTTAAGTGACGATGGCATCCAGATGCAGTGGCGCGAAGCGTTACGCCTGATGCAAAACATCTACGATTTTACCCCGCAATACGTTGTGCATGACGCGCATCCGGGCTATGTCTCCAGCCAGTGGGCGCGTGAAATGAATCTGCCGACGCAAACGGTACTGCATCATCATGCCCATGCAGCGGCGTGTCTGGCAGAGCATCAGTGGCCGCTGGATGGCGGTGATGTCATTGCTTTGACGCTCGACGGTATCGGTATGGGGGAGAACGGCGCTTTGTGGGGCGGCGAGTGCCTGCGGGTGAACTATCGCGAATGTGAGCACCTGGGCGGCTTGCCTGCAGTGGCGCTTCCGGGTGGCGATTTGGCAGCGAAGCAGCCGTGGCGAAACCTGCTGGCGCAGTGCCTGCGCTTTGTGCCGGAGTGGCAGAATTACTCTGAAACAGCAAGTGTGCAACAGCAAAACTGGAGCGTGCTGGCGCGGGCCATTGAGCGTGGAATTAACGCGCCGCTGGCGTCATCGTGTGGGCGTTTTTTCGATGCAGTGGCGGCGGCACTGGGCTGTGCGCCAGCCACGTTAAGTTATGAAGGTGAAGCGGCTTGTGCTCTGGAGGCGCTCGCAGCCTCATGCCACGGAGTGACGCATCCGGTGACAATGCCGCGGGTGGACAATCAACTGGATCTCGCCACTTTCTGGCAGCAGTGGCTGAACTGGCAGGCACCGGTTAATCAACGCGCGTGGGCGTTTCATGATGCGCTGGCGCAGGGTTTTGCCGCGTTGATGCGTGAGCAGGCCACGATGCGTGGTATCACTACGCTGGTATTTAGCGGCGGGGTTATTCATAACCGTTTGCTGCGTGCACGTCTGGCGCATTATCTCGCTGATTTCACATTGCTCTTTCCACAGAGTTTACCGGCGGGTGATGGCGGTTTGTCTCTGGGGCAGGGGGTTATTGCTGCGGCGCGTTGGTTAGCGGGTGAAGTCCAGAACGGATAA", - "dna_sequence_length": 2253, - "functions": [ - "carbamoyl phosphate phosphatase and [NiFe] hydrogenase maturation protein" - ], - "id": "CDS_2675", - "location": [ - [ - "NC_000913", - 2837425, - "-", - 2253 - ] - ], - "md5": "875dda10e5e52bc8ecf3ff5fdd2c51ab", - "parent_gene": "", - "protein_md5": "f4985eca32fae16f846c01d9774093a2", - "protein_translation": "MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDPETFLVQLYQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGKIVAIKGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYVVHDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYSETASVQQQNWSVLARAIERGINAPLASSCGRFFDAVAAALGCAPATLSYEGEAACALEALAASCHGVTHPVTMPRVDNQLDLATFWQQWLNWQAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAARWLAGEVQNG", - "protein_translation_length": 750, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2713" - ], - [ - "gene_synonym", - "EcoGene:EG11552" - ], - [ - "gene_synonym", - "JW2683" - ], - [ - "gene_synonym", - "NP_417193.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008919" - ], - [ - "gene_synonym", - "ECK2708" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAK4" - ], - [ - "gene_synonym", - "GI:16130620" - ], - [ - "gene_synonym", - "GeneID:947190" - ], - [ - "gene_synonym", - "hydN" - ] - ], - "dna_sequence": "ATGAACCGTTTCATCATTGCTGACGCGAGTAAATGTATTGGTTGCCGTACCTGTGAAGTAGCGTGCGTGGTTTCTCATCAGGAAAATCAGGACTGTGCATCGCTGACCCCGGAAACTTTTTTACCGCGTATCCATGTCATTAAAGGTGTGAACATTTCCACGGCGACAGTTTGCCGTCAGTGTGAAGATGCACCGTGCGCTAACGTCTGCCCGAATGGTGCTATCAGCCGTGATAAAGGGTTTGTTCATGTGATGCAGGAACGTTGCATTGGTTGCAAAACCTGCGTTGTGGCTTGCCCGTATGGTGCGATGGAAGTGGTGGTACGTCCGGTGATCCGCAACAGCGGCGCGGGTCTGAATGTACGGGCTGACAAAGCCGAAGCCAATAAATGCGACCTGTGCAACCATCGTGAAGACGGCCCGGCGTGTATGGCGGCTTGCCCGACTCATGCGCTGATTTGTGTCGATCGTAATAAACTTGAACAACTGAGCGCAGAAAAACGCCGCCGTACGGCGCTGATGTTCTAA", - "dna_sequence_length": 528, - "functions": [ - "formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit" - ], - "id": "CDS_2676", - "location": [ - [ - "NC_000913", - 2838105, - "-", - 528 - ] - ], - "md5": "c05a0119d5aae8f75827861edfda527a", - "parent_gene": "", - "protein_md5": "cc70f09fe5af29105781fd3a8a15181b", - "protein_translation": "MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF", - "protein_translation_length": 175, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417194.2" - ], - [ - "gene_synonym", - "b2714" - ], - [ - "gene_synonym", - "sac" - ], - [ - "gene_synonym", - "JW5434" - ], - [ - "gene_synonym", - "EcoGene:EG10087" - ], - [ - "gene_synonym", - "GeneID:947305" - ], - [ - "gene_synonym", - "ECK2709" - ], - [ - "gene_synonym", - "ASAP:ABE-0008922" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24242" - ], - [ - "gene_synonym", - "GI:345452722" - ], - [ - "gene_synonym", - "ascG" - ] - ], - "dna_sequence": "ATGACGACGATGCTGGAAGTGGCGAAGCGCGCCGGGGTTTCAAAAGCGACCGTTTCCCGCGTGCTTTCAGGTAATGGCTACGTCAGCCAGGAGACTAAAGATCGCGTGTTTCAGGCGGTAGAAGAGAGCGGTTACCGTCCAAACTTGCTGGCGCGCAATCTGTCGGCGAAGAGTACTCAGACGCTGGGGCTGGTAGTGACCAACACGCTTTACCACGGCATTTATTTTAGTGAATTACTCTTTCATGCCGCGCGAATGGCGGAAGAGAAAGGGCGGCAGTTGCTATTGGCAGATGGTAAACACAGCGCAGAAGAAGAGCGCCAGGCGATTCAGTATCTGCTGGATCTGCGCTGCGACGCGATCATGATTTACCCGCGTTTTTTAAGCGTGGATGAGATCGATGACATCATTGACGCGCACAGTCAGCCGATAATGGTGCTTAATCGCCGCCTGCGCAAAAACAGCAGCCATAGCGTCTGGTGCGATCATAAACAGACCAGTTTTAACGCCGTGGCAGAGTTGATAAACGCCGGGCATCAGGAGATTGCTTTCCTTACCGGCTCGATGGATTCCCCCACCAGCATTGAACGTCTTGCCGGGTATAAAGACGCGCTGGCGCAGCATGGTATTGCGCTCAATGAAAAACTTATCGCTAACGGTAAATGGACGCCTGCCAGCGGGGCCGAAGGGGTAGAAATGTTGCTCGAACGTGGGGCTAAATTTAGCGCGTTAGTTGCCAGTAACGACGATATGGCGATAGGTGCGATGAAAGCGTTACACGAGCGCGGCGTAGCGGTGCCAGAGCAGGTGTCAGTTATCGGATTCGATGATATCGCTATTGCCCCCTACACCGTTCCGGCGCTCTCCAGCGTAAAAATTCCGGTGACTGAGATGATTCAGGAAATTATTGGACGGCTGATTTTTATGCTCGATGGCGGGGATTTCTCACCGCCGAAAACCTTCAGCGGAAAACTGATCCGCCGCGACTCACTCATTGCTCCTTCGCGATAA", - "dna_sequence_length": 1011, - "functions": [ - "asc operon transcriptional repressor", - "prpBC operon repressor" - ], - "id": "CDS_2677", - "location": [ - [ - "NC_000913", - 2839264, - "-", - 1011 - ] - ], - "md5": "f90997b926d148cb41cb3740b5323df7", - "parent_gene": "", - "protein_md5": "92de9febea1126c7550b695d5ebe8184", - "protein_translation": "MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESGYRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIANGKWTPASGAEGVEMLLERGAKFSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFDDIAIAPYTVPALSSVKIPVTEMIQEIIGRLIFMLDGGDFSPPKTFSGKLIRRDSLIAPSR", - "protein_translation_length": 336, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2715" - ], - [ - "gene_synonym", - "ASAP:ABE-0008926" - ], - [ - "gene_synonym", - "JW5435" - ], - [ - "gene_synonym", - "sac" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24241" - ], - [ - "gene_synonym", - "GI:49176263" - ], - [ - "gene_synonym", - "EcoGene:EG10086" - ], - [ - "gene_synonym", - "GeneID:947154" - ], - [ - "gene_synonym", - "YP_026182.1" - ], - [ - "gene_synonym", - "ECK2710" - ], - [ - "gene_synonym", - "ascF" - ] - ], - "dna_sequence": "ATGGCCAAAAATTATGCGGCGCTGGCACGCTCGGTGATAGCGGCACTGGGCGGCGTTGATAACATCTCGGCGGTCACGCACTGTATGACGCGGTTGCGCTTTGTTATCAAAGATGATGCACTTATCGACAGCCCGACGTTAAAAACCATCCCCGGCGTGCTCGGCGTGGTACGTAGTGACAACCAGTGTCAGGTGATTATCGGCAATACCGTTTCACAAGCCTTTCAGGAAGTCGTCAGCCTGCTGCCGGGAGATATGCAGCCCGCACAGCCCGTGGGTAAACCCAAACTCACGCTACGTCGCATTGGTGCGGGGATCCTCGATGCGCTGATCGGCACCATGTCACCGCTGATCCCGGCGATTATCGGCGGATCGATGGTCAAACTGCTGGCAATGATCCTCGAGATGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATGGCGAAAGCGGCCCAGGGTGAACATGTCGAATTTGCCCTGATTCCGGTCACCGCGGTGAAATACACCTACACGGTGATCCCGGCGCTGGTGATGACCTGGTGCCTGTCATATATCGAACGCTGGGTGGACAGCATTACACCGGCGGTGACCAAAAACTTCCTCAAACCAATGCTGATTGTGTTGATTGCCGCACCGCTGGCAATCCTGCTGATTGGCCCGATTGGTATCTGGATCGGTAGCGCCATTTCGGCGCTGGTTTACACCATTCATGGTTATCTGGGCTGGCTTTCAGTCGCCATTATGGGCGCGCTGTGGCCTCTGCTGGTAATGACCGGGATGCACCGCGTCTTTACGCCAACCATCATTCAGACCATTGCCGAAACCGGCAAAGAAGGGATGGTCATGCCGTCAGAGATCGGCGCTAACCTGTCGCTGGGCGGTTCATCACTGGCAGTGGCGTGGAAAACGAAAAACCCGGAACTGCGTCAGACGGCGCTGGCTGCGGCGGCATCAGCCATTATGGCGGGGATTTCCGAACCGGCGTTATATGGCGTGGCGATCCGCCTGAAACGTCCGCTTATCGCCAGTCTTATCAGCGGTTTTATTTGCGGCGCGGTTGCCGGTATGGCGGGGCTTGCCAGCCACTCAATGGCAGCGCCGGGGCTATTTACCAGCGTGCAGTTCTTCGATCCGGCGAATCCAATGAGCATCGTCTGGGTGTTCGCGGTCATGGCGCTGGCGGTGGTGCTGTCGTTTATCCTCACACTGTTGCTCGGCTTTGAGGATATTCCTGTTGAGGAAGCGGCTGCCCAGGCGCGAAAGTATCAGAGCGTACAACCGACCGTCGCCAAAGAAGTAAGTCTTAATTGA", 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"b2716" - ], - [ - "gene_synonym", - "sac" - ], - [ - "gene_synonym", - "JW2686" - ], - [ - "gene_synonym", - "NP_417196.1" - ], - [ - "gene_synonym", - "GI:16130623" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24240" - ], - [ - "gene_synonym", - "GeneID:947460" - ], - [ - "gene_synonym", - "ASAP:ABE-0008928" - ], - [ - "gene_synonym", - "ECK2711" - ], - [ - "gene_synonym", - "ascB" - ] - ], - "dna_sequence": "ATGTCAGTATTTCCAGAAAGTTTTTTATGGGGCGGCGCGCTTGCCGCCAACCAGTCTGAAGGTGCGTTCCGTGAAGGTGACAAAGGTCTGACCACTGTCGATATGATCCCACACGGCGAGCATCGAATGGCGGTGAAACTGGGGCTGGAAAAACGTTTTCAGTTGCGAGATGACGAGTTTTATCCCAGCCATGAGGCGACGGATTTTTATCATCGTTATAAAGAAGATATCGCCCTGATGGCAGAGATGGGATTCAAGGTTTTCCGTACCTCAATTGCCTGGAGCCGTCTCTTTCCGCAGGGCGATGAAATCACGCCCAATCAGCAGGGCATTGCTTTTTATCGTTCTGTCTTTGAAGAGTGTAAAAAGTACGGTATCGAACCGCTGGTCACGTTGTGCCACTTCGATGTGCCGATGCATCTGGTCACCGAATATGGCTCCTGGCGTAACCGCAAGCTGGTGGAGTTTTTCAGCCGCTACGCCAGAACCTGCTTTGAAGCATTTGATGGTCTGGTGAAATACTGGCTAACCTTCAATGAAATCAACATTATGTTGCATAGCCCGTTCTCCGGCGCGGGTCTGGTGTTTGAAGAAGGTGAAAATCAGGATCAGGTGAAATATCAGGCCGCGCATCACCAGCTGGTTGCCAGTGCGCTAGCCACCAAAATCGCCCATGAGGTTAACCCGCAAAATCAGGTGGGCTGTATGCTGGCGGGCGGTAACTTCTACCCTTACAGTTGCAAGCCGGAAGATGTCTGGGCGGCGCTGGAGAAAGACCGGGAAAACCTGTTTTTTATCGATGTGCAGGCGCGGGGCACGTATCCGGCTTACTCTGCCCGCGTATTCCGCGAAAAAGGGGTAACCATCAACAAAGCACCGGGCGATGATGAAATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATGAACGCCAACAACAGCAGTGCGGCGAACGTGGTGAAATCGCTGCGTAATCCGTATCTACAGGTGAGCGACTGGGGCTGGGGAATTGATCCACTCGGTCTGCGTATCACCATGAATATGATGTACGATCGTTATCAGAAGCCGCTGTTTCTGGTGGAAAACGGCCTGGGCGCAAAAGATGAATTTGCTGCCAATGGCGAGATTAACGACGACTATCGCATCAGCTACTTACGCGAACATATCCGCGCAATGGGCGAAGCGATTGCAGACGGCATTCCGCTGATGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGCCTCTACGGGTGAAATGAGCAAACGCTACGGCTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAG", 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- [ - "gene_synonym", - "hycI" - ], - [ - "gene_synonym", - "NP_417197.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008931" - ], - [ - "gene_synonym", - "EcoGene:EG13396" - ], - [ - "gene_synonym", - "ECK2712" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEV9" - ], - [ - "gene_synonym", - "GI:16130624" - ] - ], - "dna_sequence": "GTGACTGACGTTTTACTCTGTGTTGGCAATAGCATGATGGGCGATGATGGCGCAGGTCCGCTGCTGGCGGAAAAGTGCGCCGCCGCGCCGAAAGGTAACTGGGTGGTGATTGACGGCGGTAGCGCACCGGAAAACGACATCGTCGCTATCCGTGAACTGCGCCCGACACGACTGCTGATTGTCGACGCCACGGATATGGGGCTAAACCCCGGCGAGATCCGCATCATCGACCCGGATGATATCGCCGAGATGTTTATGATGACTACCCATAACATGCCGTTGAATTACCTTATCGACCAGTTGAAAGAAGATATTGGCGAAGTGATTTTCCTCGGCATTCAGCCGGATATCGTCGGCTTTTACTACCCGATGACCCAGCCGATTAAAGATGCGGTAGAAACCGTTTATCAACGACTGGAAGGCTGGGAAGGAAATGGCGGCTTCGCGCAGTTAGCGGTGGAAGAAGAGTAG", - "dna_sequence_length": 471, - "functions": [ - "protease involved in processing C-terminal end of HycE" - ], - "id": "CDS_2680", - "location": [ - [ - "NC_000913", - 2843043, - "-", - 471 - ] - ], - "md5": "3f649bc465faa1cac9b16144cb017b67", - "parent_gene": "", - "protein_md5": "7d9566c45bae9820562fb4718b1c11d4", - "protein_translation": "MTDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPENDIVAIRELRPTRLLIVDATDMGLNPGEIRIIDPDDIAEMFMMTTHNMPLNYLIDQLKEDIGEVIFLGIQPDIVGFYYPMTQPIKDAVETVYQRLEGWEGNGGFAQLAVEEE", - "protein_translation_length": 156, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2688" - ], - [ - "gene_synonym", - "EcoGene:EG10481" - ], - [ - "gene_synonym", - "GeneID:947438" - ], - [ - "gene_synonym", - "hycH" - ], - [ - "gene_synonym", - "b2718" - ], - [ - "gene_synonym", - "hevH" - ], - [ - "gene_synonym", - "ASAP:ABE-0008933" - ], - [ - "gene_synonym", - "ECK2713" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEV7" - ], - [ - "gene_synonym", - "GI:16130625" - ], - [ - "gene_synonym", - "NP_417198.1" - ] - ], - "dna_sequence": "ATGAGTGAAAAGGTGGTGTTCAGTCAACTGAGCCGTAAATTTATTGATGAGAACGATGCCACGCCCGCCGAGGCGCAGCAGGTGGTCTATTACAGCCTGGCGATTGGTCACCACCTTGGGGTTATCGATTGCCTGGAAGCGGCGCTCACCTGCCCGTGGGATGAATATCTGGCATGGATTGCCACTCTGGAGGCAGGCAGTGAAGCCCGCCGCAAAATGGAAGGCGTGCCGAAATATGGTGAGATCGTCATCGACATTAACCATGTGCCGATGCTGGCCAACGCATTCGATAAAGCCCGGGCAGCGCAAACTTCGCAGCAGCAGGAATGGAGTACAATGCTGTTAAGTATGCTGCATGATATTCATCAGGAAAACGCCATCTATTTGATGGTGAGGAGACTGCGTGACTGA", - "dna_sequence_length": 411, - "functions": [ - "hydrogenase 3 maturation protein" - ], - "id": "CDS_2681", - "location": [ - [ - "NC_000913", - 2843446, - "-", - 411 - ] - ], - "md5": "84e95b6d8d5d1df1a5069f485783bbb4", - "parent_gene": "", - "protein_md5": "06cb9b04c3aa4d6c8d9b3dba077c19c2", - "protein_translation": "MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDCLEAALTCPWDEYLAWIATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAAQTSQQQEWSTMLLSMLHDIHQENAIYLMVRRLRD", - "protein_translation_length": 136, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hevG" - ], - [ - "gene_synonym", - "JW2689" - ], - [ - "gene_synonym", - "hycG" - ], - [ - "gene_synonym", - "EcoGene:EG10480" - ], - [ - "gene_synonym", - "GeneID:947191" - ], - [ - "gene_synonym", - "b2719" - ], - [ - "gene_synonym", - "ASAP:ABE-0008936" - ], - [ - "gene_synonym", - "NP_417199.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16433" - ], - [ - "gene_synonym", - "GI:16130626" - ], - [ - "gene_synonym", - "ECK2714" - ] - ], - "dna_sequence": "ATGAGCAATTTATTAGGCCCCCGTGACGCCAACGGCATTCCGGTCCCCATGACGGTGGATGAATCCATCGCCAGCATGAAGGCGTCGTTACTGAAAAAAATCAAACGTTCTGCCTATGTTTACCGCGTGGACTGCGGCGGCTGCAACGGTTGCGAAATCGAAATTTTCGCCACGCTTTCGCCGCTGTTTGATGCAGAACGCTTCGGCATTAAAGTCGTTCCTTCACCGCGTCATGCGGATATTTTACTGTTTACCGGCGCGGTCACCCGTGCAATGCGATCCCCTGCGCTGCGTGCGTGGCAGTCCGCGCCGGACCCGAAAATTTGTATCTCCTACGGTGCCTGCGGTAACAGTGGCGGGATCTTCCACGATCTCTACTGCGTGTGGGGCGGTACGGATAAAATTGTCCCTGTGGATGTTTATATCCCTGGCTGCCCGCCAACGCCTGCCGCCACGCTGTACGGCTTTGCAATGGCGCTCGGCCTGCTGGAGCAGAAAATTCACGCCCGTGGGCCGGGTGAACTGGATGAACAACCGGCGGAGATCCTGCATGGTGATATGGTGCAGCCGCTGCGCGTGAAAGTGGATCGCGAAGCACGTCGCCTGGCGGGTTATCGTTACGGTCGTCAGATTGCCGATGATTACCTTACACAGTTAGGGCAGGGCGAAGAACAGGTTGCACGCTGGCTGGAAGCGGAAAACGATCCGCGTCTGAACGAGATTGTCAGCCATCTGAATCATGTTGTTGAAGAGGCGCGTATCCGATGA", - "dna_sequence_length": 768, - "functions": [ - "hydrogenase 3 and formate hydrogenase complex, HycG subunit" - ], - "id": "CDS_2682", - "location": [ - [ - "NC_000913", - 2844210, - "-", - 768 - ] - ], - "md5": "b3d492f99b1858900e28e8723086dd27", - "parent_gene": "", - "protein_md5": "423b1dc960f530f19d34f8d311474fc7", - "protein_translation": "MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVDCGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQSAPDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMALGLLEQKIHARGPGELDEQPAEILHGDMVQPLRVKVDREARRLAGYRYGRQIADDYLTQLGQGEEQVARWLEAENDPRLNEIVSHLNHVVEEARIR", - "protein_translation_length": 255, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hevF" - ], - [ - "gene_synonym", - "hycF" - ], - [ - "gene_synonym", - "EcoGene:EG10479" - ], - [ - "gene_synonym", - "NP_417200.1" - ], - [ - "gene_synonym", - "JW2690" - ], - [ - "gene_synonym", - "b2720" - ], - [ - "gene_synonym", - "ASAP:ABE-0008942" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16432" - ], - [ - "gene_synonym", - "GI:16130627" - ], - [ - "gene_synonym", - "GeneID:947048" - ], - [ - "gene_synonym", - "ECK2715" - ] - ], - "dna_sequence": "ATGTTTACCTTTATCAAAAAAGTCATCAAAACCGGCACGGCGACCTCGTCTTATCCGCTGGAGCCGATTGCGGTTGATAAAAACTTCCGTGGTAAGCCAGAGCAGAACCCGCAGCAGTGCATCGGCTGCGCGGCCTGCGTCAATGCCTGCCCGTCAAACGCCTTAACGGTTGAAACTGACCTCGCCACAGGAGAGCTTGCCTGGGAGTTTAATCTTGGGCACTGCATCTTCTGTGGACGCTGCGAAGAAGTCTGCCCGACGGCGGCGATCAAACTGTCGCAAGAGTACGAACTGGCGGTGTGGAAGAAAGAAGACTTCCTGCAACAGTCCCGCTTCGCGCTGTGCAACTGCCGCGTCTGCAATCGTCCTTTCGCCGTCCAGAAAGAGATCGACTACGCCATTGCGCTGCTTAAGCACAACGGCGACAGCCGCGCGGAAAACCACCGCGAAAGCTTTGAGACTTGCCCGGAATGTAAGCGCCAGAAATGCCTGGTGCCGTCCGACCGTATTGAACTGACTCGCCATATGAAAGAGGCCATCTGA", - "dna_sequence_length": 543, - "functions": [ - "formate hydrogenlyase complex iron-sulfur protein" - ], - "id": "CDS_2683", - "location": [ - [ - "NC_000913", - 2844752, - "-", - 543 - ] - ], - "md5": "6e1361ebe4522ab41a3af1f390ca5b7a", - "parent_gene": "", - "protein_md5": "b2d92ef8bbc9c4d42558552351a33811", - "protein_translation": "MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCAACVNACPSNALTVETDLATGELAWEFNLGHCIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQQSRFALCNCRVCNRPFAVQKEIDYAIALLKHNGDSRAENHRESFETCPECKRQKCLVPSDRIELTRHMKEAI", - "protein_translation_length": 180, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hycE" - ], - [ - "gene_synonym", - "hevE" - ], - [ - "gene_synonym", - "EcoGene:EG10478" - ], - [ - "gene_synonym", - "b2721" - ], - [ - "gene_synonym", - "JW2691" - ], - [ - "gene_synonym", - "GI:16130628" - ], - [ - "gene_synonym", - "ASAP:ABE-0008944" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16431" - ], - [ - "gene_synonym", - "NP_417201.1" - ], - [ - "gene_synonym", - "ECK2716" - ], - [ - "gene_synonym", - "GeneID:947396" - ] - ], - "dna_sequence": "ATGTCTGAAGAAAAATTAGGTCAACATTATCTCGCCGCGCTGAATGAGGCATTTCCGGGCGTCGTGCTGGACCACGCCTGGCAGACCAAAGATCAGCTGACTGTCACCGTAAAGGTGAACTACCTGCCGGAAGTGGTGGAGTTTCTTTACTACAAACAGGGTGGCTGGCTGTCGGTGCTGTTTGGTAACGACGAACGCAAACTGAATGGTCATTACGCCGTTTACTACGTGCTGTCGATGGAGAAGGGCACTAAGTGTTGGATTACGGTTCGCGTCGAAGTTGACGCCAACAAACCGGAATATCCGTCCGTGACGCCGCGCGTTCCGGCGGCGGTGTGGGGCGAGCGTGAAGTGCGCGATATGTACGGTTTGATTCCGGTTGGTCTGCCGGATGAACGTCGTCTGGTGCTGCCGGATGACTGGCCGGATGAACTTTATCCGCTGCGTAAAGACAGCATGGATTATCGTCAGCGTCCGGCACCGACCACCGATGCTGAAACCTACGAGTTCATCAACGAACTGGGCGACAAGAAAAACAACGTCGTGCCGATTGGTCCGCTGCACGTCACTTCTGATGAACCGGGCCACTTCCGTCTGTTCGTCGATGGCGAAAACATTATCGACGCCGACTACCGTCTGTTCTACGTCCATCGCGGCATGGAAAAACTGGCGGAAACCCGTATGGGTTATAACGAAGTGACCTTCCTCTCTGACCGTGTGTGCGGGATCTGCGGCTTTGCCCACAGCACCGCCTACACCACGTCGGTGGAAAACGCGATGGGTATTCAGGTGCCAGAACGTGCGCAGATGATCCGCGCCATTCTGCTGGAGGTAGAACGCTTGCACTCGCATCTGCTCAACCTTGGCCTGGCCTGTCACTTTACCGGCTTCGACTCCGGCTTTATGCAGTTCTTCCGCGTGCGTGAAACCTCCATGAAAATGGCAGAGATCCTTACCGGTGCGCGTAAAACCTACGGCCTGAACTTGATCGGCGGGATTCGTCGCGATCTGCTGAAAGACGACATGATCCAGACCCGCCAGCTGGCACAACAGATGCGTCGTGAAGTGCAGGAGCTGGTGGATGTGCTGCTGAGCACTCCGAACATGGAACAGCGCACTGTCGGCATTGGTCGTCTGGACCCGGAAATCGCTCGCGACTTCAGTAACGTCGGCCCGATGGTCCGTGCCAGCGGTCACGCCCGTGATACCCGCGCCGATCACCCGTTTGTCGGCTATGGCCTGCTGCCAATGGAAGTCCACAGCGAGCAGGGCTGCGACGTTATTTCCCGTCTGAAAGTGCGTATCAACGAAGTCTATACCGCGCTGAACATGATCGACTACGGTCTGGATAACCTGCCGGGTGGCCCACTGATGGTGGAAGGCTTTACCTACATTCCGCACCGCTTTGCGCTGGGCTTTGCCGAAGCGCCGCGCGGCGATGATATCCACTGGAGCATGACCGGCGACAACCAGAAGCTGTACCGCTGGCGCTGCCGTGCCGCGACCTACGCGAACTGGCCGACCCTGCGCTACATGCTGCGCGGCAACACCGTTTCCGATGCGCCGCTGATTATCGGTAGCCTCGACCCTTGCTACTCCTGTACCGACCGCATGACCGTGGTCGATGTGCGTAAGAAGAAGAGCAAAGTGGTGCCGTACAAAGAACTCGAGCGTTACAGCATTGAGCGTAAAAACTCGCCGCTGAAATAA", - "dna_sequence_length": 1710, - "functions": [ - "hydrogenase 3, large subunit" - ], - "id": "CDS_2684", - "location": [ - [ - "NC_000913", - 2846471, - "-", - 1710 - ] - ], - "md5": "8fbaa5bab150a31a4c8f248c1548245e", - "parent_gene": "", - "protein_md5": "3eac3c2263398f6d02c5588500b228f2", - "protein_translation": "MSEEKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPAPTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGGPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTVVDVRKKKSKVVPYKELERYSIERKNSPLK", - "protein_translation_length": 569, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hycD" - ], - [ - "gene_synonym", - "hevD" - ], - [ - "gene_synonym", - "EcoGene:EG10477" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16430" - ], - [ - "gene_synonym", - "JW2692" - ], - [ - "gene_synonym", - "GI:16130629" - ], - [ - "gene_synonym", - "GeneID:948994" - ], - [ - "gene_synonym", - "b2722" - ], - [ - "gene_synonym", - "ASAP:ABE-0008946" - ], - [ - "gene_synonym", - "ECK2717" - ], - [ - "gene_synonym", - "NP_417202.1" - ] - ], - "dna_sequence": "ATGAGTGTTTTATATCCGTTAATTCAGGCGCTGGTGTTATTTGCCGTTGCGCCGCTGCTCTCCGGTATAACCCGCGTGGCGCGCGCCCGCTTGCATAACCGTCGCGGGCCGGGCGTGTTGCAGGAGTATCGCGACATTATCAAACTGCTGGGGCGTCAGAGCGTCGGCCCGGATGCCTCCGGCTGGGTGTTCCGCCTGACGCCGTATGTGATGGTGGGCGTCATGCTGACTATCGCTACTGCGCTGCCGGTGGTGACCGTCGGTTCTCCGCTGCCGCAACTGGGTGATTTGATCACCTTACTGTATCTCTTTGCCATCGCGCGTTTCTTCTTTGCCATTTCTGGTCTGGATACCGGTAGCCCGTTTACCGCTATCGGCGCGAGCCGTGAAGCGATGCTTGGCGTGCTGGTCGAACCGATGCTGCTGCTTGGTCTGTGGGTTGCCGCACAGGTTGCCGGTTCCACCAACATCAGCAACATCACCGACACCGTTTATCACTGGCCGCTGAGCCAGAGCATCCCGCTGGTACTGGCGCTTTGTGCCTGTGCGTTCGCCACCTTTATCGAAATGGGCAAACTGCCGTTCGACCTGGCGGAAGCCGAGCAGGAGCTGCAGGAAGGCCCGCTCTCTGAATACAGCGGCAGCGGCTTTGGCGTCATGAAATGGGGTATCAGCCTGAAACAGCTGGTGGTGTTGCAGATGTTCGTCGGGGTGTTTATTCCGTGGGGACAAATGGAAACCTTCACCGCCGGTGGACTGCTGCTGGCGCTGGTGATTGCCATCGTAAAACTGGTGGTCGGCGTCCTGGTTATCGCGCTGTTCGAAAACAGCATGGCCCGTCTGCGTCTTGATATTACTCCGCGCATTACCTGGGCTGGGTTTGGCTTTGCATTTTTAGCGTTCGTCTCCTTGCTGGCGGCGTGA", - "dna_sequence_length": 924, - "functions": [ - "hydrogenase 3, membrane subunit" - ], - "id": "CDS_2685", - "location": [ - [ - "NC_000913", - 2847412, - "-", - 924 - ] - ], - "md5": "fd3de4afdc7bca1aee9f3eceaf99fd1b", - "parent_gene": "", - "protein_md5": "72c36b819af33da167d851e4057394fd", - "protein_translation": "MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYRDIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLYLFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENSMARLRLDITPRITWAGFGFAFLAFVSLLAA", - "protein_translation_length": 307, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945327" - ], - [ - "gene_synonym", - "GI:16130630" - ], - [ - "gene_synonym", - "hevC" - ], - [ - "gene_synonym", - "hycC" - ], - [ - "gene_synonym", - "NP_417203.1" - ], - [ - "gene_synonym", - "EcoGene:EG10476" - ], - [ - "gene_synonym", - "JW2693" - ], - [ - "gene_synonym", - "ECK2718" - ], - [ - "gene_synonym", - "ASAP:ABE-0008948" - ], - [ - "gene_synonym", - "b2723" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16429" - ] - ], - "dna_sequence": "ATGAGCGCAATTTCCCTGATCAATAGCGGCGTGGCGTGGTTTGTCGCCGCCGCTGTTCTGGCATTTCTCTTTTCTTTTCAAAAAGCGTTAAGTGGCTGGATAGCTGGAATTGGCGGCGCGGTTGGTAGTCTGTATACGGCAGCCGCGGGCTTCACTGTACTGACTGGCGCGGTTGGCGTGAGCGGTGCGCTGTCGCTGGTAAGCTACGATGTGCAAATCTCTCCGCTTAACGCGATTTGGCTGATTACGCTCGGTCTGTGCGGTCTGTTTGTCAGCCTCTACAACATTGACTGGCATCGCCACGCGCAGGTGAAGTGCAACGGCTTGCAGATCAATATGTTGATGGCTGCCGCCGTCTGCGCCGTCATTGCCAGCAACCTCGGCATGTTCGTGGTAATGGCCGAAATCATGGCCCTGTGCGCGGTGTTCCTCACCAGCAACAGCAAAGAGGGCAAACTGTGGTTTGCGCTGGGGCGTCTTGGCACTCTGCTGCTGGCGATTGCTTGCTGGCTGCTGTGGCAGCGTTACGGCACGCTGGATCTGCGCCTGCTGGATATGCGTATGCAACAGCTGCCGCTCGGTTCCGATATCTGGCTGCTCGGAGTGATTGGCTTTGGCCTGCTGGCCGGGATTATTCCGCTGCACGGCTGGGTGCCGCAGGCACATGCGAACGCCTCTGCGCCAGCTGCCGCGTTGTTTTCTACGGTAGTCATGAAAATTGGCCTGCTGGGCATTTTAACCCTGTCACTGCTGGGCGGTAATGCACCGCTGTGGTGGGGGATCGCGCTGCTGGTGCTCGGCATGATCACCGCGTTTGTCGGTGGTCTGTATGCGCTGGTGGAGCACAACATCCAGCGCCTGCTGGCTTACCACACCCTGGAAAATATCGGCATCATCCTGCTGGGGCTGGGCGCTGGCGTAACGGGTATCGCGCTCGAACAACCGGCGCTGATTGCTCTTGGCCTGGTCGGTGGTCTGTACCATCTGCTTAACCATAGCCTGTTCAAAAGCGTACTGTTCCTCGGGGCGGGGAGCGTCTGGTTCCGTACCGGTCATCGCGATATCGAAAAACTCGGTGGTATTGGCAAGAAAATGCCGGTTATCTCCATCGCCATGTTAGTCGGGCTGATGGCAATGGCTGCGCTGCCGCCGCTGAATGGTTTTGCCGGGGAATGGGTTATCTATCAATCATTTTTCAAACTGAGCAATAGTGGCGCGTTTGTTGCCCGTCTGCTGGGGCCGCTGCTCGCTGTGGGGCTGGCAATTACCGGTGCGCTGGCGGTGATGTGTATGGCGAAAGTCTATGGCGTCACGTTCCTCGGCGCGCCGCGCACCAAAGAAGCCGAAAACGCCACCTGTGCGCCGCTCCTGATGAGCGTAAGCGTAGTGGCACTGGCGATTTGCTGCGTAATTGGCGGTGTTGCTGCGCCGTGGCTACTGCCGATGCTCTCTGCTGCTGTACCTCTGCCGCTGGAGCCTGCTAACACCACCGTTTCTCAACCGATGATCACGTTGCTGCTGATTGCCTGCCCGCTGCTGCCATTCATCATTATGGCGATTTGCAAAGGCGATCGTTTGCCATCGCGTTCCCGCGGTGCGGCCTGGGTGTGCGGTTACGACCACGAAAAATCAATGGTGATTACCGCTCACGGTTTTGCCATGCCGGTGAAACAGGCGTTTGCGCCGGTGCTGAAACTACGCAAATGGCTGAATCCGGTGTCTCTGGTGCCGGGCTGGCAGTGCGAGGGGAGTGCGTTGCTGTTCCGCCGGATGGCGCTGGTTGAACTGGCGGTACTGGTGGTGATTATTGTTTCACGAGGAGCCTGA", - "dna_sequence_length": 1827, - "functions": [ - "hydrogenase 3, membrane subunit" - ], - "id": "CDS_2686", - "location": [ - [ - "NC_000913", - 2849241, - "-", - 1827 - ] - ], - "md5": "26f25ed44087aee020ad7160e9cdd3ee", - "parent_gene": "", - "protein_md5": "2753297d14c057f902f7bf6cbf69c567", - "protein_translation": "MSAISLINSGVAWFVAAAVLAFLFSFQKALSGWIAGIGGAVGSLYTAAAGFTVLTGAVGVSGALSLVSYDVQISPLNAIWLITLGLCGLFVSLYNIDWHRHAQVKCNGLQINMLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTSNSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGIALLVLGMITAFVGGLYALVEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLLMSVSVVALAICCVIGGVAAPWLLPMLSAAVPLPLEPANTTVSQPMITLLLIACPLLPFIIMAICKGDRLPSRSRGAAWVCGYDHEKSMVITAHGFAMPVKQAFAPVLKLRKWLNPVSLVPGWQCEGSALLFRRMALVELAVLVVIIVSRGA", - "protein_translation_length": 608, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417204.1" - ], - [ - "gene_synonym", - "hevB" - ], - [ - "gene_synonym", - "hycB" - ], - [ - "gene_synonym", - "b2724" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAK1" - ], - [ - "gene_synonym", - "ASAP:ABE-0008950" - ], - [ - "gene_synonym", - "JW2694" - ], - [ - "gene_synonym", - "ECK2719" - ], - [ - "gene_synonym", - "EcoGene:EG10475" - ], - [ - "gene_synonym", - "GI:16130631" - ], - [ - "gene_synonym", - "GeneID:948002" - ] - ], - "dna_sequence": "GTGAATCGTTTTGTAATTGCTGACTCCACGCTCTGTATCGGCTGCCACACTTGTGAGGCCGCCTGTTCAGAGACGCATCGCCAGCACGGCCTGCAATCAATGCCGCGCCTGAGAGTGATGCTGAATGAAAAAGAATCTGCGCCGCAGCTCTGTCACCACTGTGAAGATGCACCCTGCGCGGTGGTCTGCCCGGTTAACGCCATCACCCGCGTCGATGGGGCCGTGCAGTTGAATGAAAGCCTGTGCGTAAGCTGCAAGCTGTGCGGCATCGCCTGCCCGTTTGGCGCAATTGAATTTTCCGGCAGCCGTCCGCTGGATATTCCGGCAAACGCCAATACCCCGAAAGCGCCACCGGCACCGCCTGCTCCGGCGCGTGTCAGCACATTGCTTGACTGGGTGCCAGGTATTCGCGCGATCGCCGTCAAATGTGACCTTTGTAGCTTTGATGAACAAGGTCCGGCCTGCGTGCGGATGTGCCCGACTAAAGCCCTGCATCTGGTGGATAACACCGATATCGCCCGCGTCAGCAAACGTAAGCGTGAGCTGACCTTTAACACGGACTTTGGCGATCTCACCTTGTTTCAGCAGGCTCAAAGTGGAGAGGCTAAATGA", - "dna_sequence_length": 612, - "functions": [ - "hydrogenase 3, Fe-S subunit" - ], - "id": "CDS_2687", - "location": [ - [ - "NC_000913", - 2849849, - "-", - 612 - ] - ], - "md5": "32e15eb8748c9f229a17bc9a84eb3f06", - "parent_gene": "", - "protein_md5": "06a9c09d8a8b902904a8bcd7080524b0", - "protein_translation": "MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEKESAPQLCHHCEDAPCAVVCPVNAITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLDIPANANTPKAPPAPPAPARVSTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCPTKALHLVDNTDIARVSKRKRELTFNTDFGDLTLFQQAQSGEAK", - "protein_translation_length": 203, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10474" - ], - [ - "gene_synonym", - "GI:16130632" - ], - [ - "gene_synonym", - "hycA" - ], - [ - "gene_synonym", - "NP_417205.1" - ], - [ - "gene_synonym", - "b2725" - ], - [ - "gene_synonym", - "ASAP:ABE-0008952" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEV4" - ], - [ - "gene_synonym", - "ECK2720" - ], - [ - "gene_synonym", - "JW2695" - ], - [ - "gene_synonym", - "hevA" - ], - [ - "gene_synonym", - "GeneID:947193" - ] - ], - "dna_sequence": "ATGACTATTTGGGAAATAAGCGAGAAAGCCGATTACATCGCACAGCGGCATCGTCGCCTACAGGACCAGTGGCACATCTACTGCAATTCGCTGGTTCAGGGGATCACGTTATCGAAAGCGCGCCTGCATCACGCCATGAGCTGCGCGCCGGACAAAGAACTCTGTTTCGTCCTTTTTGAACATTTTCGCATTTACGTCACCCTGGCGGATGGCTTTAACAGCCACACCATCGAGTATTACGTCGAAACAAAAGATGGCGAAGACAAACAGCGGATTGCGCAGGCGCAACTGAGCATTGACGGCATGATTGATGGCAAGGTCAACATCCGCGATCGCGAACAGGTTCTGGAACACTATCTCGAAAAAATCGCTGGCGTTTACGACAGCTTATACACCGCTATTGAAAACAATGTGCCGGTGAATTTAAGCCAACTGGTAAAGGGACAAAGCCCGGCAGCATGA", - "dna_sequence_length": 462, - "functions": [ - "regulator of the transcriptional regulator FhlA" - ], - "id": "CDS_2688", - "location": [ - [ - "NC_000913", - 2850435, - "-", - 462 - ] - ], - "md5": "1946818944cd042c737422335673de4c", - "parent_gene": "", - "protein_md5": "0767ce54ee39b8e281fcbd854dae8cc2", - "protein_translation": "MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHHAMSCAPDKELCFVLFEHFRIYVTLADGFNSHTIEYYVETKDGEDKQRIAQAQLSIDGMIDGKVNIRDREQVLEHYLEKIAGVYDSLYTAIENNVPVNLSQLVKGQSPAA", - "protein_translation_length": 153, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008958" - ], - [ - "gene_synonym", - "EcoGene:EG10483" - ], - [ - "gene_synonym", - "JW2696" - ], - [ - "gene_synonym", - "NP_417206.1" - ], - [ - "gene_synonym", - "ECK2721" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A700" - ], - [ - "gene_synonym", - "GI:16130633" - ], - [ - "gene_synonym", - "GeneID:947195" - ], - [ - "gene_synonym", - "hypA" - ], - [ - "gene_synonym", - "b2726" - ] - ], - "dna_sequence": "ATGCACGAAATAACCCTCTGCCAACGGGCACTGGAATTGATCGAACAGCAGGCCGCAAAACACGGCGCAAAACGCGTAACTGGGGTCTGGCTCAAAATTGGCGCATTTTCTTGTGTCGAAACCAGCTCTCTTGCCTTTTGTTTTGATCTGGTTTGCCGCGGCAGCGTGGCGGAAGGTTGTAAACTGCACCTCGAAGAACAAGAGGCCGAATGCTGGTGTGAAACATGCCAACAGTATGTGACGCTACTGACCCAGCGCGTCCGCCGCTGTCCACAGTGTCATGGTGACATGCTGCAGATTGTGGCAGACGACGGTTTACAGATTCGGCGGATAGAAATAGACCAGGAGTGA", - "dna_sequence_length": 351, - "functions": [ - "protein involved in nickel insertion into hydrogenases 3" - ], - "id": "CDS_2689", - "location": [ - [ - "NC_000913", - 2850647, - "+", - 351 - ] - ], - "md5": "4602eb82dc5feec29847772f95fbb9f5", - "parent_gene": "", - "protein_md5": "e0ef488a5fde62cb45115f4e5aaf1c66", - "protein_translation": "MHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSLAFCFDLVCRGSVAEGCKLHLEEQEAECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVADDGLQIRRIEIDQE", - "protein_translation_length": 116, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10484" - ], - [ - "gene_synonym", - "b2727" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAN3" - ], - [ - "gene_synonym", - "JW2697" - ], - [ - "gene_synonym", - "ASAP:ABE-0008960" - ], - [ - "gene_synonym", - "GeneID:947194" - ], - [ - "gene_synonym", - "ECK2722" - ], - [ - "gene_synonym", - "hydB" - ], - [ - "gene_synonym", - "hydE" - ], - [ - "gene_synonym", - "NP_417207.1" - ], - [ - "gene_synonym", - "GI:16130634" - ], - [ - "gene_synonym", - "hypB" - ] - ], - "dna_sequence": "ATGTGTACAACATGCGGTTGCGGTGAAGGCAACCTGTATATCGAGGGTGATGAACATAACCCTCATTCCGCGTTTCGTAGCGCGCCATTTGCCCCGGCGGCACGCCCGAAGATGAAAATCACCGGCATTAAAGCGCCTGAATTTACCCCCAGCCAGACTGAAGAAGGCGACCTGCATTACGGTCATGGCGAAGCGGGCACTCACGCACCGGGCATGAGCCAGCGTCGGATGCTGGAAGTCGAAATTGACGTGCTGGACAAAAATAACCGTCTGGCTGAACGCAACCGCGCGCGCTTTGCTGCCCGCAAGCAACTGGTGCTCAACCTGGTTTCCAGCCCTGGTTCCGGTAAAACCACCCTGCTGACGGAAACCCTAATGCGCCTGAAAGACAGCGTTCCGTGCGCAGTTATTGAAGGCGACCAGCAAACCGTGAACGATGCCGCACGCATTCGCGCTACCGGCACACCAGCGATTCAGGTGAACACCGGTAAAGGCTGCCATCTTGACGCACAGATGATTGCCGACGCCGCACCGCGTCTGCCACTGGACGATAACGGTATTCTGTTTATCGAAAACGTTGGCAACCTCGTATGCCCGGCCAGCTTCGATCTCGGTGAAAAACACAAAGTGGCGGTGCTTTCCGTTACCGAAGGTGAAGACAAACCACTGAAATATCCGCATATGTTTGCCGCCGCCTCGCTGATGCTGCTCAACAAAGTTGACCTGTTGCCGTATCTCAACTTTGACGTTGAAAAGTGCATCGCCTGCGCCCGCGAAGTCAATCCAGAAATTGAAATCATCCTTATTTCCGCCACCAGCGGCGAAGGGATGGACCAGTGGCTGAACTGGCTGGAGACACAGCGATGTGCATAG", - "dna_sequence_length": 873, - "functions": [ - "GTP hydrolase involved in nickel liganding into hydrogenases" - ], - "id": "CDS_2690", - "location": [ - [ - "NC_000913", - 2851001, - "+", - 873 - ] - ], - "md5": "67de7617cb478f1717093f35cebed923", - "parent_gene": "", - "protein_md5": "8661b27e6c644be13f4028a3476702ef", - "protein_translation": "MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIKAPEFTPSQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAARKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQVNTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEGMDQWLNWLETQRCA", - "protein_translation_length": 290, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10485" - ], - [ - "gene_synonym", - "JW2698" - ], - [ - "gene_synonym", - "ASAP:ABE-0008962" - ], - [ - "gene_synonym", - "ECK2723" - ], - [ - "gene_synonym", - "hypC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAM3" - ], - [ - "gene_synonym", - "b2728" - ], - [ - "gene_synonym", - "GeneID:947192" - ], - [ - "gene_synonym", - "GI:16130635" - ], - [ - "gene_synonym", - "NP_417208.1" - ] - ], - "dna_sequence": "ATGTGCATAGGCGTTCCCGGCCAGATCCGCACCATTGACGGCAACCAGGCGAAAGTCGACGTCTGCGGCATTCAGCGCGATGTCGATTTAACGTTAGTCGGCAGCTGCGATGAAAACGGTCAGCCGCGCGTGGGCCAGTGGGTACTGGTACACGTTGGCTTTGCCATGAGCGTAATTAATGAAGCCGAAGCACGCGACACTCTCGACGCCTTACAAAACATGTTTGACGTTGAGCCGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAA", - "dna_sequence_length": 273, - "functions": [ - "hydrogenase maturation protein" - ], - "id": "CDS_2691", - "location": [ - [ - "NC_000913", - 2851864, - "+", - 273 - ] - ], - "md5": "48eaf222d711ce58bcdfa597b4025a9b", - "parent_gene": "", - "protein_md5": "7d03db32baa353bf74d064d746359a3b", - "protein_translation": "MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGFAMSVINEAEARDTLDALQNMFDVEPDVGALLYGEEK", - "protein_translation_length": 90, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10486" - ], - [ - "gene_synonym", - "JW2699" - ], - [ - "gene_synonym", - "ECK2724" - ], - [ - "gene_synonym", - "ASAP:ABE-0008965" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24192" - ], - [ - "gene_synonym", - "GeneID:947189" - ], - [ - "gene_synonym", - "NP_417209.1" - ], - [ - "gene_synonym", - "hydF" - ], - [ - "gene_synonym", - "hypD" - ], - [ - "gene_synonym", - "GI:16130636" - ], - [ - "gene_synonym", - "b2729" - ] - ], - "dna_sequence": "ATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAACGCCCTCTGCGGATTATGGAAGTGTGTGGCGGTCATACCCACGCTATCTTTAAATTCGGCCTCGACCAGTTACTGCCGGAAAACGTTGAGTTTATCCACGGTCCGGGGTGCCCGGTGTGCGTACTGCCGATGGGTAGAATCGACACCTGCGTGGAGATTGCCAGCCATCCGGAAGTCATCTTCTGTACCTTTGGCGACGCCATGCGCGTGCCGGGGAAACAGGGATCGCTGTTGCAGGCAAAAGCACGCGGTGCCGATGTGCGCATCGTTTACTCGCCGATGGATGCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGAAACCACTATGCCGACCACCGCTATCACTCTGCAACAGGCGAAAGCGCGTGATGTGCAGAATTTTTACTTCTTCTGCCAGCACATTACGCTTATCCCGACGTTGCGCAGTTTGCTGGAACAGCCGGATAACGGTATCGATGCGTTCCTCGCGCCGGGTCACGTCAGTATGGTTATCGGCACCGACGCCTATAATTTTATCGCCAGCGATTTTCATCGTCCGCTGGTGGTTGCTGGATTCGAACCCCTTGATCTACTACAAGGCGTGGTCATGCTGGTGCAGCAGAAAATAGCGGCCCACAGCAAGGTAGAGAATCAGTATCGTCGAGTGGTACCGGATGCCGGTAACCTGCTGGCGCAACAGGCGATTGCCGATGTGTTCTGTGTCAACGGCGACAGCGAATGGCGCGGCTTAGGCGTGATTGAATCTTCTGGCGTGCACCTGACGCCGGATTATCAACGATTCGATGCCGAAGCACATTTCCGCCCGGCACCGCAGCAGGTCTGCGATGACCCGCGCGCGCGTTGTGGTGAGGTATTAACGGGCAAATGTAAGCCGCATCAATGCCCGCTGTTTGGTAACACCTGTAATCCTCAAACCGCGTTTGGTGCGCTGATGGTTTCCTCCGAAGGAGCGTGCGCCGCGTGGTATCAGTATCGTCAGCAGGAGAGTGAAGCGTGA", - "dna_sequence_length": 1122, - "functions": [ - "hydrogenase maturation protein" - ], - "id": "CDS_2692", - "location": [ - [ - "NC_000913", - 2852136, - "+", - 1122 - ] - ], - "md5": "9599331b9b73b2520efdd4fbf1498897", - "parent_gene": "", - "protein_md5": "815550358607c5587918c2b33a9e0af4", - "protein_translation": "MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGHTHAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRVPGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQAKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDFHRPLVVAGFEPLDLLQGVVMLVQQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCVNGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPHQCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA", - "protein_translation_length": 373, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2730" - ], - [ - "gene_synonym", - "EcoGene:EG10487" - ], - [ - "gene_synonym", - "JW2700" - ], - [ - "gene_synonym", - "NP_417210.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0008967" - ], - [ - "gene_synonym", - "GI:226524740" - ], - [ - "gene_synonym", - "hydB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24193" - ], - [ - "gene_synonym", - "ECK2725" - ], - [ - "gene_synonym", - "hypE" - ], - [ - "gene_synonym", - "GeneID:947182" - ] - ], - "dna_sequence": "GTGAATAATATCCAACTCGCCCACGGTAGCGGCGGCCAGGCGATGCAGCAATTAATCAACAGCCTGTTTATGGAAGCCTTTGCCAACCCGTGGCTGGCAGAGCAGGAAGATCAGGCACGTCTTGATCTGGCGCAGCTGGTAGCGGAAGGCGACCGTCTGGCGTTCTCCACCGACAGTTACGTTATTGACCCGCTGTTCTTCCCTGGCGGTAATATCGGCAAGCTGGCGATTTGCGGCACAGCCAATGACGTTGCGGTCAGTGGCGCTATTCCGCGCTATCTCTCCTGTGGCTTTATCCTCGAAGAAGGATTGCCGATGGAGACACTGAAAGCCGTAGTGACCAGCATGGCAGAAACCGCCCGCGCGGCAGGCATTGCCATCGTTACTGGCGATACTAAAGTGGTGCAGCGCGGCGCGGTAGATAAACTGTTTATCAACACCGCTGGCATGGGCGCAATTCCGGCGAATATTCACTGGGGCGCACAGACGCTAACCGCAGGCGATGTATTGCTGGTGAGCGGTACACTCGGCGACCACGGGGCGACTATCCTTAACCTGCGTGAGCAGCTGGGGCTGGATGGCGAACTGGTCAGCGACTGCGCGGTGCTGACGCCGCTTATTCAGACGCTGCGTGACATTCCCGGCGTGAAAGCGCTGCGTGATGCCACCCGTGGTGGTGTAAACGCGGTGGTTCATGAGTTCGCGGCAGCCTGCGGTTGTGGTATTGAACTTTCAGAAGCGGCACTGCCTGTTAAACCTGCCGTGCGTGGCGTTTGCGAATTGCTGGGACTGGACGCCCTGAACTTTGCCAACGAAGGCAAACTAGTAATAGCTGTTGAACGCAACGCGGCAGAGCAAGTGCTGGCAGCGTTACATTCCCATCCACTGGGGAAAGACGCGGCGCTGATTGGTGAAGTGGTGGAACGTAAAGGTGTTCGTCTTGCCGGTCTGTATGGCGTGAAACGAACCCTCGATTTACCACACGCCGAACCGCTTCCGCGTATATGCTAA", - "dna_sequence_length": 1011, - "functions": [ - "carbamoyl dehydratase, hydrogenases 1,2,3 maturation protein" - ], - "id": "CDS_2693", - "location": [ - [ - "NC_000913", - 2853254, - "+", - 1011 - ] - ], - "md5": "bb0995b577ee32d37c140e02276de08a", - "parent_gene": "", - "protein_md5": "e6243d74399253f6affb56e61fe6cb77", - "protein_translation": "MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLAQLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPRYLSCGFILEEGLPMETLKAVVTSMAETARAAGIAIVTGDTKVVQRGAVDKLFINTAGMGAIPANIHWGAQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKALRDATRGGVNAVVHEFAAACGCGIELSEAALPVKPAVRGVCELLGLDALNFANEGKLVIAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPRIC", - "protein_translation_length": 336, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "fhl" - ], - [ - "gene_synonym", - "b2731" - ], - [ - "gene_synonym", - "fhlA" - ], - [ - "gene_synonym", - "ASAP:ABE-0008971" - ], - [ - "gene_synonym", - "JW2701" - ], - [ - "gene_synonym", - "EcoGene:EG10301" - ], - [ - "gene_synonym", - "GI:16130638" - ], - [ - "gene_synonym", - "ECK2726" - ], - [ - "gene_synonym", - "GeneID:947181" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P19323" - ], - [ - "gene_synonym", - "NP_417211.1" - ] - ], - "dna_sequence": "ATGTCATATACACCGATGAGTGATCTCGGACAACAAGGGTTGTTCGACATCACTCGGACACTATTGCAGCAGCCCGATCTGGCCTCGCTGTGTGAGGCTCTTTCGCAACTGGTAAAGCGTTCTGCGCTCGCCGACAACGCGGCTATTGTGTTGTGGCAAGCGCAGACTCAACGTGCGTCTTATTACGCGTCGCGTGAAAAAGACACCCCCATTAAATATGAAGACGAAACTGTTCTGGCACACGGTCCGGTACGCAGCATTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTTTTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTAACAATGTCGACTATGAGTTGTTATGCCGGGAACGCGATAACTTCCGCATCCTGGTCGCCATCACCAACGCGGTGCTTTCCCGCCTGGATATGGACGAACTGGTCAGCGAAGTCGCCAAAGAAATCCATTACTATTTCGACATTGACGATATCAGTATCGTCTTACGCAGCCACCGTAAAAACAAACTCAACATCTACTCCACTCACTATCTTGATAAACAGCATCCCGCCCACGAACAGAGCGAAGTCGATGAAGCCGGAACCCTCACCGAACGCGTGTTCAAAAGTAAAGAGATGCTGCTGATCAATCTCCACGAGCGGGACGATTTAGCCCCCTATGAACGCATGTTGTTCGACACCTGGGGCAACCAGATTCAAACCTTGTGCCTGTTACCGCTGATGTCTGGCGACACCATGCTGGGCGTGCTGAAACTGGCGCAATGCGAAGAGAAAGTGTTTACCACTACCAATCTGAATTTACTGCGCCAGATTGCCGAACGTGTGGCAATCGCTGTCGATAACGCCCTCGCCTATCAGGAAATCCATCGTCTGAAAGAACGGCTGGTTGATGAAAACCTCGCCCTGACCGAGCAGCTCAACAATGTTGATAGTGAATTTGGCGAGATTATTGGCCGCAGCGAAGCCATGTACAGCGTGCTTAAACAAGTTGAAATGGTGGCGCAAAGTGACAGTACCGTGCTGATCCTCGGTGAAACTGGCACGGGTAAAGAGCTGATTGCCCGTGCGATCCATAATCTCAGTGGGCGTAATAATCGCCGCATGGTCAAAATGAACTGCGCGGCGATGCCTGCCGGATTGCTGGAAAGCGATCTGTTTGGTCATGAGCGTGGGGCTTTTACCGGTGCCAGCGCCCAGCGTATCGGTCGTTTTGAACTGGCGGATAAAAGCTCCCTGTTCCTCGACGAAGTGGGCGATATGCCACTGGAGTTACAGCCGAAGTTGCTGCGTGTATTGCAGGAACAGGAGTTTGAACGTCTCGGCAGCAACAAAATCATTCAGACGGACGTGCGTCTAATCGCCGCGACTAACCGCGATCTGAAAAAAATGGTCGCCGACCGTGAGTTCCGTAGCGATCTCTATTACCGCCTGAACGTATTCCCGATTCACCTGCCGCCACTACGCGAGCGTCCGGAAGATATTCCGCTGCTGGCGAAAGCCTTTACCTTCAAAATTGCCCGTCGTCTGGGGCGCAATATCGACAGCATTCCTGCCGAGACGCTGCGCACCTTGAGCAACATGGAGTGGCCGGGTAACGTACGCGAACTGGAAAACGTCATTGAGCGCGCGGTATTGCTAACACGCGGTAACGTGCTGCAGCTGTCATTGCCAGATATTGTTTTACCGGAACCTGAAACGCCGCCTGCCGCAACGGTTGTCGCCCTGGAGGGCGAAGATGAATATCAGTTGATTGTGCGCGTGCTGAAAGAAACCAACGGCGTGGTTGCCGGGCCTAAAGGCGCTGCGCAACGTCTGGGGCTGAAACGCACGACCCTGCTGTCACGGATGAAGCGGCTGGGAATTGATAAATCGGCATTGATTTAA", 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"MSYTPMSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALADNAAIVLWQAQTQRASYYASREKDTPIKYEDETVLAHGPVRSILSRPDTLHCSYEEFCETWPQLDAGGLYPKFGHYCLMPLAAEGHIFGGCEFIRYDDRPWSEKEFNRLQTFTQIVSVVTEQIQSRVVNNVDYELLCRERDNFRILVAITNAVLSRLDMDELVSEVAKEIHYYFDIDDISIVLRSHRKNKLNIYSTHYLDKQHPAHEQSEVDEAGTLTERVFKSKEMLLINLHERDDLAPYERMLFDTWGNQIQTLCLLPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLRQIAERVAIAVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVIERAVLLTRGNVLQLSLPDIVLPEPETPPAATVVALEGEDEYQLIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGIDKSALI", - "protein_translation_length": 692, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2732" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25728" - ], - [ - "gene_synonym", - "JW2702" - ], - [ - "gene_synonym", - "ASAP:ABE-0008973" - ], - [ - "gene_synonym", - "GI:16130639" - ], - [ - "gene_synonym", - "ECK2727" - ], - [ - "gene_synonym", - "ygbA" - ], - [ - "gene_synonym", - "NP_417212.1" - ], - [ - "gene_synonym", - "EcoGene:EG11287" - ], - [ - "gene_synonym", - "GeneID:947187" - ] - ], - "dna_sequence": "ATGTCCGGCAAGCGTATCTCTCGTGAAAAACTGACGATTAAAAAAATGATCGATCTTTATCAAGCGAAATGCCCGCAGGCGTCAGCGGAGCCGGAGCATTACGAGGCGTTGTTTGTTTACGCGCAAAAGCGGCTGGATAAATGTGTGTTCGGCGAAGAGAAACCAGCCTGTAAGCAGTGTCCGGTGCACTGTTACCAGCCTGCAAAGCGTGAAGAGATGAAACAGATTATGCGTTGGGCCGGGCCGAGAATGCTGTGGCGTCATCCGATCTTAACCGTGCGTCATCTCATCGATGACAAGCGTCCGGTGCCAGAACTGCCGGAAAAATATCGTCCGAAAAAACCTCATGAATAG", - "dna_sequence_length": 354, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2695", - "location": [ - [ - "NC_000913", - 2856806, - "-", - 354 - ] - ], - "md5": "4746835f93272fed092fadc532968c6f", - "parent_gene": "", - "protein_md5": "687d7a57c0c238a46191b6eef0d1f544", - "protein_translation": "MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKRLDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRPVPELPEKYRPKKPHE", - "protein_translation_length": 117, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2733" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23909" - ], - [ - "gene_synonym", - "NP_417213.1" - ], - [ - "gene_synonym", - "JW2703" - ], - [ - "gene_synonym", - "GI:16130640" - ], - [ - "gene_synonym", - "ASAP:ABE-0008977" - ], - [ - "gene_synonym", - "ant" - ], - [ - "gene_synonym", - "mutS" - ], - [ - "gene_synonym", - "EcoGene:EG10625" - ], - [ - "gene_synonym", - "fdv" - ], - [ - "gene_synonym", - "plm" - ], - [ - "gene_synonym", - "ECK2728" - ], - [ - "gene_synonym", - "GeneID:947206" - ] - ], - "dna_sequence": "ATGAGTGCAATAGAAAATTTCGACGCCCATACGCCCATGATGCAGCAGTATCTCAGGCTGAAAGCCCAGCATCCCGAGATCCTGCTGTTTTACCGGATGGGTGATTTTTATGAACTGTTTTATGACGACGCAAAACGCGCGTCGCAACTGCTGGATATTTCACTGACCAAACGCGGTGCTTCGGCGGGAGAGCCGATCCCGATGGCGGGGATTCCCTACCATGCGGTGGAAAACTATCTCGCCAAACTGGTGAATCAGGGAGAGTCCGTTGCCATCTGCGAACAAATTGGCGATCCGGCGACCAGCAAAGGTCCGGTTGAGCGCAAAGTTGTGCGTATCGTTACGCCAGGCACCATCAGCGATGAAGCCCTGTTGCAGGAGCGTCAGGACAACCTGCTGGCGGCTATCTGGCAGGACAGCAAAGGTTTCGGCTACGCGACGCTGGATATCAGTTCCGGGCGTTTTCGCCTGAGCGAACCGGCTGACCGCGAAACGATGGCGGCAGAACTGCAACGCACTAATCCTGCGGAACTGCTGTATGCAGAAGATTTTGCTGAAATGTCGTTAATTGAAGGCCGTCGCGGCCTGCGCCGTCGCCCGCTGTGGGAGTTTGAAATCGACACCGCGCGCCAGCAGTTGAATCTGCAATTTGGGACCCGCGATCTGGTCGGTTTTGGCGTCGAGAACGCGCCGCGCGGACTTTGTGCTGCCGGTTGTCTGTTGCAGTATGCGAAAGATACCCAACGTACGACTCTGCCGCATATTCGTTCCATCACCATGGAACGTGAGCAGGACAGCATCATTATGGATGCCGCGACGCGTCGTAATCTGGAAATCACCCAGAACCTGGCGGGTGGTGCGGAAAATACGCTGGCTTCTGTGCTCGACTGCACCGTCACGCCGATGGGCAGCCGTATGCTGAAACGCTGGCTGCATATGCCAGTGCGCGATACCCGCGTGTTGCTTGAGCGCCAGCAAACTATTGGCGCATTGCAGGATTTCACCGCCGGGCTACAGCCGGTACTGCGTCAGGTCGGCGACCTGGAACGTATTCTGGCACGTCTGGCTTTACGAACTGCTCGCCCACGCGATCTGGCCCGTATGCGCCACGCTTTCCAGCAACTGCCGGAGCTGCGTGCGCAGTTAGAAACTGTCGATAGTGCACCGGTACAGGCGCTACGTGAGAAGATGGGCGAGTTTGCCGAGCTGCGCGATCTGCTGGAGCGAGCAATCATCGACACACCGCCGGTGCTGGTACGCGACGGTGGTGTTATCGCATCGGGCTATAACGAAGAGCTGGATGAGTGGCGCGCGCTGGCTGACGGCGCGACCGATTATCTGGAGCGTCTGGAAGTCCGCGAGCGTGAACGTACCGGCCTGGACACGCTGAAAGTTGGCTTTAATGCGGTGCACGGCTACTACATTCAAATCAGCCGTGGGCAAAGCCATCTGGCACCCATCAACTACATGCGTCGCCAGACGCTGAAAAACGCCGAGCGCTACATCATTCCAGAGCTAAAAGAGTACGAAGATAAAGTTCTCACCTCAAAAGGCAAAGCACTGGCACTGGAAAAACAGCTTTATGAAGAGCTGTTCGACCTGCTGTTGCCGCATCTGGAAGCGTTGCAACAGAGCGCGAGCGCGCTGGCGGAACTCGACGTGCTGGTTAACCTGGCGGAACGGGCCTATACCCTGAACTACACCTGCCCGACCTTCATTGATAAACCGGGCATTCGCATTACCGAAGGTCGCCATCCGGTAGTTGAACAAGTACTGAATGAGCCATTTATCGCCAACCCGCTGAATCTGTCGCCGCAGCGCCGCATGTTGATCATCACCGGTCCGAACATGGGCGGTAAAAGTACCTATATGCGCCAGACCGCACTGATTGCGCTGATGGCCTACATCGGCAGCTATGTACCGGCACAAAAAGTCGAGATTGGACCTATCGATCGCATCTTTACCCGCGTAGGCGCGGCAGATGACCTGGCGTCCGGGCGCTCAACCTTTATGGTGGAGATGACTGAAACCGCCAATATTTTACATAACGCCACCGAATACAGTCTGGTGTTAATGGATGAGATCGGGCGTGGAACGTCCACCTACGATGGTCTGTCGCTGGCGTGGGCGTGCGCGGAAAATCTGGCGAATAAGATTAAGGCATTGACGTTATTTGCTACCCACTATTTCGAGCTGACCCAGTTACCGGAGAAAATGGAAGGCGTCGCTAACGTGCATCTCGATGCACTGGAGCACGGCGACACCATTGCCTTTATGCACAGCGTGCAGGATGGCGCGGCGAGCAAAAGCTACGGCCTGGCGGTTGCAGCTCTGGCAGGCGTGCCAAAAGAGGTTATTAAGCGCGCACGGCAAAAGCTGCGTGAGCTGGAAAGCATTTCGCCGAACGCCGCCGCTACGCAAGTGGATGGTACGCAAATGTCTTTGCTGTCAGTACCAGAAGAAACTTCGCCTGCGGTCGAAGCTCTGGAAAATCTTGATCCGGATTCACTCACCCCGCGTCAGGCGCTGGAGTGGATTTATCGCTTGAAGAGCCTGGTGTAA", 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"MSAIENFDAHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDFTAGLQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQALREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERLEVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELESISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV", - "protein_translation_length": 853, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P55799" - ], - [ - "gene_synonym", - "prpB" - ], - [ - "gene_synonym", - "ASAP:ABE-0008980" - ], - [ - "gene_synonym", - "b2734" - ], - [ - "gene_synonym", - "JW2704" - ], - [ - "gene_synonym", - "GI:16130641" - ], - [ - "gene_synonym", - "NP_417214.1" - ], - [ - "gene_synonym", - "pphB" - ], - [ - "gene_synonym", - "EcoGene:EG13102" - ], - [ - "gene_synonym", - "GeneID:947196" - ], - [ - "gene_synonym", - "ECK2729" - ], - [ - "gene_synonym", - "ygbH" - ] - ], - "dna_sequence": "ATGCCATCTACACGCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTGGTTTACGTCGGTTAAAGGCAACCACGAAGCGATGGCGCTTGAGGCATTCGAAACTGGCGATGGCAATATGTGGCTTGCCAGCGGTGGTGACTGGTTTTTCGATTTAAATGATTCAGAGCAACAAGAGGCAATAGATCTGTTGCTGAAATTCCATCACCTTCCACATATTATTGAAATCACTAACGACAACATAAAATATGCCATCGCACATGCAGATTATCCGGGGAGTGAATATCTCTTTGGTAAAGAAATAGCGGAGAGCGAATTACTCTGGCCTGTTGATCGTGTGCAGAAATCGCTTAATGGCGAGTTACAACAAATAAACGGCGCTGATTATTTTATATTTGGACATATGATGTTTGATAACATTCAGACGTTCGCTAACCAGATTTATATTGATACCGGATCGCCGAACAGCGGGCGGCTGTCATTTTATAAAATAAAGTAG", - "dna_sequence_length": 657, - "functions": [ - "serine/threonine-specific protein phosphatase 2" - ], - "id": "CDS_2697", - "location": [ - [ - "NC_000913", - 2859760, - "+", - 657 - ] - ], - "md5": "514b1d037920218288249ae69a318aae", - "parent_gene": "", - "protein_md5": "d4e453d9cbe0441007daa8895990d55a", - "protein_translation": "MPSTRYQKINAHHYRHIWVVGDIHGEYQLLQSRLHQLSFFPKIDLLISVGDNIDRGPESLDVLRLLNQPWFTSVKGNHEAMALEAFETGDGNMWLASGGDWFFDLNDSEQQEAIDLLLKFHHLPHIIEITNDNIKYAIAHADYPGSEYLFGKEIAESELLWPVDRVQKSLNGELQQINGADYFIFGHMMFDNIQTFANQIYIDTGSPNSGRLSFYKIK", - "protein_translation_length": 218, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2735" - ], - [ - "gene_synonym", - "ASAP:ABE-0008982" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52598" - ], - [ - "gene_synonym", - "JW2705" - ], - [ - "gene_synonym", - "ECK2730" - ], - [ - "gene_synonym", - "GeneID:947204" - ], - [ - "gene_synonym", - "NP_417215.2" - ], - [ - "gene_synonym", - "EcoGene:EG13103" - ], - [ - "gene_synonym", - "GI:226524741" - ], - [ - "gene_synonym", - "ygbI" - ] - ], - "dna_sequence": "TTGATACCCGTAGAGCGTCGCCAAATCATCCTTGAGATGGTAGCTGAAAAAGGCATTGTCAGTATTGCTGAACTAACGGACAGAATGAATGTGTCACATATGACCATTCGTCGGGATTTACAAAAACTGGAGCAGCAGGGAGCCGTTGTGCTGGTGTCCGGAGGCGTCCAGTCTCCGGGACGCGTGGCGCATGAACCTTCTCATCAGGTAAAAACTGCGCTGGCAATGACGCAAAAAGCGGCTATTGGCAAGCTGGCGGCAAGTCTTGTTCAGCCGGGAAGTTGTATCTATCTGGATGCGGGAACGACCACGTTAGCGATAGCACAGCATCTGATTCACATGGAGTCACTGACTGTGGTCACAAACGATTTCGTTATTGCGGACTACTTGCTCGACAACAGTAATTGCACAATTATTCACACTGGCGGTGCAGTGTGTCGGGAAAACCGTTCCTGTGTCGGGGAAGCCGCTGCGACCATGCTGCGCAGCCTGATGATTGATCAGGCTTTTATTTCTGCATCGTCATGGAGTGTGCGGGGGATTTCTACGCCAGCGGAAGATAAAGTCACGGTGAAACGGGCGATTGCCAGTGCCAGCCGCCAGCGAGTTTTGGTCTGTGATGCGACGAAATATGGTCAGGTGGCGACATGGCTGGCGTTACCATTAAGCGAGTTTGATCAGATTATTACAGACGACGGTTTGCCGGAGAGTGCCAGTCGCGCGCTGGTGAAGCAGGATCTCTCTTTGCTGGTAGCGAAAAATGAATAA", - "dna_sequence_length": 768, - "functions": [ - "DeoR family putative transcriptional regulator" - ], - "id": "CDS_2698", - "location": [ - [ - "NC_000913", - 2861234, - "-", - 768 - ] - ], - "md5": "ccc57553fc1b736894b07b98dcc99e38", - "parent_gene": "", - "protein_md5": "f19f7aaf3d3e50b8ee0101a20115e9d6", - "protein_translation": "MIPVERRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDLQKLEQQGAVVLVSGGVQSPGRVAHEPSHQVKTALAMTQKAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIADYLLDNSNCTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVKRAIASASRQRVLVCDATKYGQVATWLALPLSEFDQIITDDGLPESASRALVKQDLSLLVAKNE", - "protein_translation_length": 255, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0008986" - ], - [ - "gene_synonym", - "b2736" - ], - [ - "gene_synonym", - "NP_417216.1" - ], - [ - "gene_synonym", - "JW2706" - ], - [ - "gene_synonym", - "GI:16130643" - ], - [ - "gene_synonym", - "EcoGene:EG13104" - ], - [ - "gene_synonym", - "ECK2731" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46888" - ], - [ - "gene_synonym", - "GeneID:947200" - ], - [ - "gene_synonym", - "ygbJ" - ] - ], - "dna_sequence": "ATGAAAACGGGATCTGAGTTTCATGTCGGTATCGTTGGCTTAGGGTCAATGGGAATGGGAGCAGCACTGTCATATGTCCGCGCAGGTCTTTCTACCTGGGGCGCAGACCTGAACAGCAATGCCTGCGCTACGTTGAAAGAGGCAGGTGCTTGCGGGGTTTCTGATAACGCCGCGACGTTTGCCGAAAAACTGGACGCACTGCTGGTGCTGGTGGTCAATGCGGCCCAGGTTAAACAGGTGCTGTTTGGTGAAACAGGCGTTGCACAACATCTGAAACCCGGTACGGCAGTAATGGTTTCTTCCACTATCGCTAGTGCTGATGCGCAAGAAATTGCTACCGCTCTGGCTGGATTCGATCTGGAAATGCTGGATGCGCCAGTTTCTGGTGGTGCAGTAAAAGCCGCTAACGGTGAAATGACTGTCATGGCCTCCGGTAGCGATATTGCCTTTGAACGACTGGCACCCGTGCTGGAAGCCGTTGCCGGAAAAGTTTATCGCATAGGTGCAGAACCGGGACTAGGTTCGACCGTAAAAATTATTCACCAGTTGTTAGCGGGCGTACATATTGCTGCCGGAGCCGAAGCGATGGCACTTGCAGCCCGTGCGGGGATCCCGCTGGATGTGATGTATGACGTCGTGACCAATGCCGCCGGAAATTCCTGGATGTTCGAAAACCGGATGCGTCATGTGGTGGATGGCGATTACACCCCGCATTCAGCCGTCGATATTTTTGTTAAGGATCTTGGTCTGGTTGCCGATACAGCCAAAGCCCTGCACTTCCCGCTGCCATTGGCCTCAACAGCATTGAATATGTTCACCAGCGCCAGTAACGCGGGTTACGGGAAAGAAGACGATAGCGCAGTTATCAAGATTTTCTCTGGCATCACTCTACCGGGAGCGAAATCATGA", - "dna_sequence_length": 909, - "functions": [ - "putative dehydrogenase" - ], - "id": "CDS_2699", - "location": [ - [ - "NC_000913", - 2861430, - "+", - 909 - ] - ], - "md5": "0659e1b562a8eca67c38beb856c9fbbf", - "parent_gene": "", - "protein_md5": "e798d886807af415c977083436acd4ec", - "protein_translation": "MKTGSEFHVGIVGLGSMGMGAALSYVRAGLSTWGADLNSNACATLKEAGACGVSDNAATFAEKLDALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSSTIASADAQEIATALAGFDLEMLDAPVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAGNSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGITLPGAKS", - "protein_translation_length": 302, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417217.1" - ], - [ - "gene_synonym", - "b2737" - ], - [ - "gene_synonym", - "GI:16130644" - ], - [ - "gene_synonym", - "JW2707" - ], - [ - "gene_synonym", - "ASAP:ABE-0008988" - ], - [ - "gene_synonym", - "EcoGene:EG13105" - ], - [ - "gene_synonym", - "ECK2732" - ], - [ - "gene_synonym", - "GeneID:947199" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46889" - ], - [ - "gene_synonym", - "ygbK" - ] - ], - "dna_sequence": "ATGATCAAGATTGGCGTTATCGCCGATGATTTTACCGGCGCGACGGATATCGCCAGTTTTCTGGTGGAAAACGGTCTACCAACGGTACAAATTAACGGTGTTCCAACAGGTAAAATGCCGGAAGCAATCGACGCACTGGTGATCAGCCTGAAAACGCGCTCCTGTCCAGTGGTTGAAGCCACACAGCAATCGCTGGCGGCTCTGAGCTGGTTGCAACAGCAAGGTTGCAAACAGATCTATTTCAAATACTGCTCTACTTTCGACAGTACGGCGAAAGGTAATATTGGCCCGGTTACCGATGCCTTAATGGATGCTCTCGACACGCCGTTTACGGTCTTCTCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGCCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCGGCACATGTTTTCGAACAAGGTGTGGATGCCGTTCGTCAAGAGCTGGCTCGCTTACAGCAAGAGGGCTACCGCTACGCGGTGCTTGATGCGCTGACCGAACACCATCTGGAAATTCAGGGAGAAGCCTTGCGCGATGCCCCACTGGTAACGGGCGGTTCTGGTCTGGCGATTGGCCTGGCCCGGCAGTGGGCGCAAGAAAACGGTAACCAGGCTCGCAAAGCAGGGCGTCCGCTCGCTGGGCGCGGCGTAGTGCTCTCCGGTTCATGCTCTCAAATGACCAACCGCCAGGTAGCACATTACCGTCAAATTGCACCAGCCCGTGAAGTTGATGTGGCACGCTGCCTCTCAATTGAAACTCTGGCCGCTTATGCACACGAACTGGCAGAGTGGGTTCTGGGCCAGGAAAGTGTACTTGCTCCACTGGTTTTTGCCACCGCCAGCACTGACGCATTGGCAGCAATTCAACAGCAATACGGTGCACAAAAAGCCAGTCAGGCAGTAGAAACACTGTTTTCTCAACTAGCGGCGCGGTTAGCAGCGGAAGGCGTGACACGCTTTATTGTCGCAGGCGGTGAGACCTCCGGCGTAGTCACACAGAGCCTGGGAATAAAAGGGTTTCATATTGGCCCAACCATTTCCCCGGCGTGCCGTGGGTAA", 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- ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46890" - ], - [ - "gene_synonym", - "EcoGene:EG13106" - ], - [ - "gene_synonym", - "ECK2733" - ], - [ - "gene_synonym", - "GeneID:947197" - ], - [ - "gene_synonym", - "ygbL" - ] - ], - "dna_sequence": "ATGAGCGATTTCGCAAAAGTAGAGCAGTCTTTGCGAGAGGAGATGACGCGGATTGCCAGTTCATTCTTTCAGCGCGGCTATGCAACCGGTTCGGCTGGCAATCTGTCGCTGCTTTTACCTGACGGGAATTTACTGGCGACACCGACAGGTTCATGCCTGGGCAATCTCGATCCGCAGCGGCTTTCCAAAGTCGCCGCGGATGGCGAATGGTTAAGTGGTGACAAACCCTCGAAAGAGGTGCTCTTTCATCTGGCGCTGTATCGCAACAATCCGCGCTGTAAAGCGGTGGTGCATTTGCACAGCACATGGTCGACGGCGCTTTCCTGCCTGCAAGGGCTGGACAGCAGCAACGTTATTCGTCCGTTCACACCATACGTGGTGATGCGGATGGGAAATGTCCCGCTGGTGCCTTATTACCGACCGGGCGATAAACGCATCGCACAGGATCTGGCGGAACTGGCAGCAGACAATCAGGCTTTTTTACTGGCAAATCATGGCCCAGTGGTTTGCGGTGAAAGCCTGCAAGAAGCCGCCAACAATATGGAAGAGCTGGAGGAAACGGCAAAGCTGATTTTTATTCTCGGTGACCGCCCGATCCGTTATCTGACCGCAGGTGAAATTGCGGAATTAAGGAGTTAA", - "dna_sequence_length": 639, - "functions": [ - "putative class II aldolase" - ], - "id": "CDS_2701", - "location": [ - [ - "NC_000913", - 2863593, - "+", - 639 - ] - ], - "md5": "68f1e70fd033d43c6f4127d20b00da33", - "parent_gene": "", - "protein_md5": "fe2d49c088577750c4b7c90374c139bd", - "protein_translation": "MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNLLATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHSTWSTALSCLQGLDSSNVIRPFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAFLLANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS", - "protein_translation_length": 212, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2709" - ], - [ - "gene_synonym", - "ASAP:ABE-0008996" - ], - [ - "gene_synonym", - "GI:16130646" - ], - [ - "gene_synonym", - "b2739" - ], - [ - "gene_synonym", - "NP_417219.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46891" - ], - [ - "gene_synonym", - "EcoGene:EG13107" - ], - [ - "gene_synonym", - "ECK2734" - ], - [ - "gene_synonym", - "ygbM" - ], - [ - "gene_synonym", - "GeneID:947207" - ] - ], - "dna_sequence": "ATGCCTCGTTTTGCAGCTAATTTATCCATGATGTTCACCGAAGTGCCTTTTATTGAACGCTTCGCCGCAGCGCGAAAAGCCGGGTTCGATGCTGTGGAATTTCTGTTTCCCTATAACTACTCCACCCTGCAAATCCAAAAGCAACTGGAGCAAAACCATCTGACACTGGCGCTGTTCAATACCGCTCCCGGAGATATTAATGCGGGGGAATGGGGATTATCCGCCCTTCCCGGACGTGAGCACGAAGCACACGCAGACATCGACCTGGCACTGGAATATGCATTGGCGCTCAATTGTGAACAAGTCCATGTGATGGCAGGCGTCGTGCCCGCTGGCGAAGATGCTGAACGGTACCGGGCAGTATTTATCGATAATATCCGCTACGCTGCCGACCGCTTTGCGCCACACGGCAAGCGAATATTAGTTGAAGCACTCAGCCCCGGCGTTAAGCCTCATTATCTCTTCTCCAGCCAGTATCAGGCACTGGCTATTGTTGAAGAGGTTGCGCGAGATAACGTGTTTATTCAACTAGATACTTTTCATGCGCAAAAAGTAGATGGCAACCTGACGCATTTAATCCGCGACTACGCCGGGAAATATGCGCACGTACAAATTGCCGGACTACCTGATCGACATGAACCGGACGATGGAGAAATCAACTATCCGTGGCTGTTCCGCCTGTTCGATGAGGTGGGATATCAGGGCTGGATCGGTTGTGAATATAAACCTCGTGGCCTCACCGAAGAAGGGCTTGGCTGGTTTGACGCCTGGCGCTAA", - "dna_sequence_length": 777, - "functions": [ - "putative hydroxypyruvate isomerase" - ], - "id": "CDS_2702", - "location": [ - [ - "NC_000913", - 2864236, - "+", - 777 - ] - ], - "md5": 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"ATGTCCACAATTACATTGTTATGCATTGCGTTAGCTGGCGTAATCATGCTGTTGCTGCTGGTCATCAAGGCAAAGGTACAACCATTCGTTGCTTTGCTCCTCGTCAGCCTGTTAGTCGCACTTGCGGCAGGTATACCGGCGGGCGAAGTGGGTAAAGTGATGATCGCCGGGATGGGCGGTGTGCTTGGTTCCGTCACTATTATTATTGGTCTGGGCGCTATGCTGGGGCGTATGATCGAACACTCTGGTGGTGCAGAGTCACTGGCTAATTATTTCAGTCGCAAGTTAGGTGACAAACGAACTATCGCTGCGCTGACTCTGGCAGCGTTCTTCCTCGGTATTCCCGTCTTCTTTGATGTCGGCTTTATTATTCTTGCGCCAATCATTTACGGTTTTGCCAAGGTTGCCAAAATATCGCCACTCAAATTTGGCCTGCCTGTCGCTGGGATCATGCTCACTGTTCACGTGGCGGTACCGCCGCATCCAGGCCCTGTCGCCGCAGCGGGGTTACTCCACGCAGACATCGGCTGGCTAACCATCATCGGTATTGCGATTTCTATTCCCGTAGGGGTTGTTGGCTACTTTGCAGCGAAAATAATCAATAAGCGCCAATATGCGATGTCAGTAGAAGTACTGGAACAGATGCAACTGGCTCCGGCCAGTGAGGAAGGCGCGACAAAATTAAGCGATAAAATAAATCCACCGGGCGTCGCGCTGGTCACCTCGCTAATTGTTATTCCTATCGCGATTATCATGGCGGGTACGGTTTCCGCAACACTGATGCCGCCTTCGCATCCCCTGCTTGGTACGCTACAGCTGATCGGCTCACCAATGGTAGCTCTAATGATTGCGCTGGTGCTGGCATTCTGGTTATTGGCTTTACGTCGCGGCTGGAGCTTACAACACACCAGCGACATTATGGGCTCAGCGCTTCCTACTGCGGCGGTAGTGATTTTGGTTACTGGTGCTGGAGGGGTATTTGGCAAAGTGCTGGTGGAATCGGGCGTCGGCAAAGCCCTTGCCAACATGCTACAAATGATTGACCTGCCTCTGTTACCAGCCGCATTTATTATTTCACTGGCGCTGCGTGCATCGCAGGGGTCAGCAACCGTAGCAATACTGACAACCGGCGGGTTACTCTCAGAAGCGGTGATGGGATTGAATCCGATTCAGTGCGTATTGGTGACGCTGGCAGCCTGCTTTGGTGGGCTTGGTGCGTCACATATTAATGACTCAGGGTTCTGGATTGTGACCAAATATCTGGGGTTGTCGGTAGCAGACGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAATTTGA", - "dna_sequence_length": 1365, - "functions": [ - "putative transporter" - ], - "id": "CDS_2703", - "location": [ - [ - "NC_000913", - 2865101, - "+", - 1365 - ] - ], - "md5": "301def19ee1d75192ea3eee10cba667d", - "parent_gene": "", - "protein_md5": "c46cc044abcf0b53e91c75ded33d4a87", - "protein_translation": "MSTITLLCIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTIAALTLAAFFLGIPVFFDVGFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPPHPGPVAAAGLLHADIGWLTIIGIAISIPVGVVGYFAAKIINKRQYAMSVEVLEQMQLAPASEEGATKLSDKINPPGVALVTSLIVIPIAIIMAGTVSATLMPPSHPLLGTLQLIGSPMVALMIALVLAFWLLALRRGWSLQHTSDIMGSALPTAAVVILVTGAGGVFGKVLVESGVGKALANMLQMIDLPLLPAAFIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQCVLVTLAACFGGLGASHINDSGFWIVTKYLGLSVADGLKTWTVLTTILGFTGFLITWCVWAVI", - "protein_translation_length": 454, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rpoS" - ], - [ - "gene_synonym", - "EcoGene:EG10510" - ], - [ - "gene_synonym", - "csi2" - ], - [ - "gene_synonym", - "ASAP:ABE-0009001" - ], - [ - "gene_synonym", - "GI:16130648" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P13445" - ], - [ - "gene_synonym", - "JW5437" - ], - [ - "gene_synonym", - "b2741" - ], - [ - "gene_synonym", - "nur" - ], - [ - "gene_synonym", - "appR" - ], - [ - "gene_synonym", - "NP_417221.1" - ], - [ - "gene_synonym", - "sigS" - ], - [ - "gene_synonym", - "abrD" - ], - [ - "gene_synonym", - "otsX" - ], - [ - "gene_synonym", - "dpeB" - ], - [ - "gene_synonym", - "ECK2736" - ], - [ - "gene_synonym", - "GeneID:947210" - ], - [ - "gene_synonym", - "katF" - ] - ], - "dna_sequence": "ATGAGTCAGAATACGCTGAAAGTTCATGATTTAAATGAAGATGCGGAATTTGATGAGAACGGAGTTGAGGTTTTTGACGAAAAGGCCTTAGTAGAACAGGAACCCAGTGATAACGATTTGGCCGAAGAGGAACTGTTATCGCAGGGAGCCACACAGCGTGTGTTGGACGCGACTCAGCTTTACCTTGGTGAGATTGGTTATTCACCACTGTTAACGGCCGAAGAAGAAGTTTATTTTGCGCGTCGCGCACTGCGTGGAGATGTCGCCTCTCGCCGCCGGATGATCGAGAGTAACTTGCGTCTGGTGGTAAAAATTGCCCGCCGTTATGGCAATCGTGGTCTGGCGTTGCTGGACCTTATCGAAGAGGGCAACCTGGGGCTGATCCGCGCGGTAGAGAAGTTTGACCCGGAACGTGGTTTCCGCTTCTCAACATACGCAACCTGGTGGATTCGCCAGACGATTGAACGGGCGATTATGAACCAAACCCGTACTATTCGTTTGCCGATTCACATCGTAAAGGAGCTGAACGTTTACCTGCGAACCGCACGTGAGTTGTCCCATAAGCTGGACCATGAACCAAGTGCGGAAGAGATCGCAGAGCAACTGGATAAGCCAGTTGATGACGTCAGCCGTATGCTTCGTCTTAACGAGCGCATTACCTCGGTAGACACCCCGCTGGGTGGTGATTCCGAAAAAGCGTTGCTGGACATCCTGGCCGATGAAAAAGAGAACGGTCCGGAAGATACCACGCAAGATGACGATATGAAGCAGAGCATCGTCAAATGGCTGTTCGAGCTGAACGCCAAACAGCGTGAAGTGCTGGCACGTCGATTCGGTTTGCTGGGGTACGAAGCGGCAACACTGGAAGATGTAGGTCGTGAAATTGGCCTCACCCGTGAACGTGTTCGCCAGATTCAGGTTGAAGGCCTGCGCCGTTTGCGCGAAATCCTGCAAACGCAGGGGCTGAATATCGAAGCGCTGTTCCGCGAGTAA", - "dna_sequence_length": 993, - "functions": [ - "RNA polymerase, sigma S (sigma 38) factor" - ], - "id": "CDS_2704", - "location": [ - [ - "NC_000913", - 2867551, - "-", - 993 - ] - ], - "md5": "5a554fa06d60e1c90dff89e1f530dae6", - "parent_gene": "", - "protein_md5": "7417edad24ebb41985e3a95878289efc", - "protein_translation": "MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEQEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE", - "protein_translation_length": 330, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947011" - ], - [ - "gene_synonym", - "nlpD" - ], - [ - "gene_synonym", - "GI:16130649" - ], - [ - "gene_synonym", - "b2742" - ], - [ - "gene_synonym", - "EcoGene:EG12111" - ], - [ - "gene_synonym", - "JW2712" - ], - [ - "gene_synonym", - "NP_417222.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009004" - ], - [ - "gene_synonym", - "ECK2737" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADA3" - ] - ], - "dna_sequence": "ATGAGCGCGGGAAGCCCAAAATTCACCGTTCGCCGCATTGCGGCTTTGTCACTGGTTTCGCTATGGCTGGCAGGCTGTTCTGACACTTCAAATCCACCGGCACCGGTCAGCTCCGTTAATGGCAATGCGCCTGCAAATACTAATTCTGGTATGTTGATTACGCCGCCGCCGAAAATGGGGACGACGTCTACAGCGCAGCAACCGCAAATTCAGCCGGTGCAGCAGCCACAAATTCAGGCTACTCAACAACCGCAAATCCAGCCAGTGCAGCCAGTAGCTCAGCAGCCGGTACAGATGGAAAACGGACGCATCGTCTATAACCGTCAGTATGGGAACATTCCGAAAGGCAGTTATAGCGGCAGTACCTATACCGTGAAAAAAGGCGACACACTTTTCTATATCGCCTGGATTACTGGCAACGATTTCCGTGACCTTGCTCAGCGCAACAATATTCAGGCACCATACGCGCTGAACGTTGGTCAGACCTTGCAGGTGGGTAATGCTTCCGGTACGCCAATCACTGGCGGAAATGCCATTACCCAGGCCGACGCAGCAGAGCAAGGAGTTGTGATCAAGCCTGCACAAAATTCCACCGTTGCTGTTGCGTCGCAACCGACAATTACGTATTCTGAGTCTTCGGGTGAACAGAGTGCTAACAAAATGTTGCCGAACAACAAGCCAACTGCGACCACGGTCACAGCGCCTGTAACGGTACCAACAGCAAGCACAACCGAGCCGACTGTCAGCAGTACATCAACCAGTACGCCTATCTCCACCTGGCGCTGGCCGACTGAGGGCAAAGTGATCGAAACCTTTGGCGCTTCTGAGGGGGGCAACAAGGGGATTGATATCGCAGGCAGCAAAGGACAGGCAATTATCGCGACCGCAGATGGCCGCGTTGTTTATGCTGGTAACGCGCTGCGCGGCTACGGTAATCTGATTATCATCAAACATAATGATGATTACCTGAGTGCCTACGCCCATAACGACACAATGCTGGTCCGGGAACAACAAGAAGTTAAGGCGGGGCAAAAAATAGCGACCATGGGTAGCACCGGAACCAGTTCAACACGCTTGCATTTTGAAATTCGTTACAAGGGGAAATCCGTAAACCCGCTGCGTTATTTGCCGCAGCGATAA", 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- ], - [ - "gene_synonym", - "EcoGene:EG10689" - ], - [ - "gene_synonym", - "ASAP:ABE-0009006" - ], - [ - "gene_synonym", - "GI:16130650" - ], - [ - "gene_synonym", - "ECK2738" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7A5" - ] - ], - "dna_sequence": "ATGGTAAGCAGACGCGTACAAGCACTTCTGGATCAATTACGTGCGCAAGGTATTCAGGATGAGCAGGTGCTGAATGCACTTGCCGCCGTGCCGCGTGAAAAATTCGTTGATGAAGCGTTTGAACAAAAAGCCTGGGACAATATCGCTTTGCCGATAGGTCAGGGGCAGACAATTTCGCAGCCATATATGGTGGCGCGAATGACCGAATTACTCGAGCTGACGCCGCAGTCGCGGGTGCTGGAAATTGGCACCGGTTCGGGATATCAAACGGCAATCCTGGCGCATCTTGTCCAGCATGTTTGCTCGGTTGAACGGATTAAAGGCTTGCAGTGGCAGGCACGTCGCCGCCTGAAAAATCTTGATTTACATAATGTTTCAACCCGTCATGGCGATGGATGGCAAGGTTGGCAGGCACGTGCGCCGTTTGACGCTATCATTGTTACGGCGGCACCGCCGGAAATTCCAACTGCGCTAATGACGCAGCTGGACGAAGGCGGGATTCTCGTCTTACCCGTAGGGGAGGAGCACCAGTATTTGAAACGGGTGCGTCGTCGGGGAGGCGAATTTATTATCGATACCGTGGAGGCCGTGCGCTTTGTCCCTTTAGTGAAGGGTGAGCTGGCTTAA", - "dna_sequence_length": 627, - "functions": [ - "L-isoaspartate protein carboxylmethyltransferase type II" - ], - "id": "CDS_2706", - "location": [ - [ - "NC_000913", - 2869519, - "-", - 627 - ] - ], - "md5": "2c0fd54026b9fcda8064d07df029c1bb", - "parent_gene": "", - "protein_md5": "74dc26128b76215968daf2543c090ded", - "protein_translation": "MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKAWDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGEEHQYLKRVRRRGGEFIIDTVEAVRFVPLVKGELA", - "protein_translation_length": 208, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "surE" - ], - [ - "gene_synonym", - "GI:16130651" - ], - [ - "gene_synonym", - "JW2714" - ], - [ - "gene_synonym", - "b2744" - ], - [ - "gene_synonym", - "umpG" - ], - [ - "gene_synonym", - "ygbC" - ], - [ - "gene_synonym", - "NP_417224.1" - ], - [ - "gene_synonym", - "GeneID:947211" - ], - [ - "gene_synonym", - "ECK2739" - ], - [ - "gene_synonym", - "EcoGene:EG11817" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A840" - ], - [ - "gene_synonym", - "ASAP:ABE-0009008" - ] - ], - "dna_sequence": "ATGCGCATATTGCTGAGTAATGATGACGGGGTACATGCACCCGGTATACAAACGCTGGCGAAAGCCTTGCGTGAGTTTGCTGACGTTCAGGTGGTCGCCCCCGATCGTAACCGCAGCGGCGCTTCAAATTCTCTGACACTGGAATCCTCCCTGCGCACGTTTACCTTTGAAAATGGTGATATTGCTGTGCAAATGGGAACCCCGACCGATTGCGTCTATCTTGGCGTGAATGCTCTGATGCGTCCGCGCCCGGACATTGTTGTGTCCGGAATTAACGCCGGGCCGAATCTGGGGGATGATGTTATTTATTCCGGTACGGTAGCCGCCGCGATGGAAGGCCGTCATTTAGGTTTTCCGGCGCTTGCCGTCTCGCTTGACGGGCATAAACATTACGACACTGCCGCGGCGGTAACCTGTTCAATTTTGCGCGCACTGTGTAAAGAGCCGCTGCGCACCGGGCGTATTCTTAATATTAACGTTCCGGATTTACCCTTGGATCAAATCAAAGGTATTCGCGTGACGCGCTGCGGTACACGACATCCGGCAGATCAGGTGATCCCGCAGCAAGATCCGCGCGGCAATACGCTGTACTGGATTGGCCCGCCGGGCGGTAAATGTGATGCTGGTCCGGGGACCGATTTTGCTGCGGTAGATGAGGGCTATGTCTCCATCACGCCGCTGCATGTGGATTTAACTGCGCATAGCGCGCAAGATGTGGTTTCAGACTGGTTAAACAGCGTGGGAGTTGGCACGCAATGGTAA", - "dna_sequence_length": 762, - "functions": [ - "broad specificity 5'(3')-nucleotidase and polyphosphatase" - ], - "id": "CDS_2707", - "location": [ - [ - "NC_000913", - 2870274, - "-", - 762 - ] - ], - "md5": "206fbfc0b58f7054e8c2fca4e68c7ab5", - "parent_gene": "", - "protein_md5": "0856dc608b1d4b7dbbc35dee969c97f8", - "protein_translation": "MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW", - "protein_translation_length": 253, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13109" - ], - [ - "gene_synonym", - "ECK2740" - ], - [ - "gene_synonym", - "GI:16130652" - ], - [ - "gene_synonym", - "JW2715" - ], - [ - "gene_synonym", - "b2745" - ], - [ - "gene_synonym", - "GeneID:947214" - ], - [ - "gene_synonym", - "ASAP:ABE-0009011" - ], - [ - "gene_synonym", - "ygbO" - ], - [ - "gene_synonym", - "NP_417225.1" - ], - [ - "gene_synonym", - "truD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q57261" - ] - ], - "dna_sequence": "ATGATTGAGTTTGATAATCTCACTTACCTCCACGGTAAACCGCAAGGCACCGGGCTGCTGAAAGCCAATCCGGAAGACTTTGTGGTGGTGGAAGATTTGGGCTTTGAGCCTGATGGTGAAGGTGAGCATATTCTGGTTAGAATCCTCAAAAACGGCTGCAATACCCGTTTTGTGGCGGATGCACTGGCGAAATTCCTGAAAATTCATGCCCGTGAAGTCAGCTTCGCTGGGCAAAAAGACAAACATGCTGTTACGGAACAGTGGTTATGCGCTCGCGTGCCGGGCAAGGAAATGCCCGATCTGAGCGCCTTTCAACTGGAAGGCTGCCAGGTGCTGGAGTATGCGCGGCACAAGCGCAAGCTGCGTTTAGGCGCGCTGAAAGGTAACGCCTTTACCCTGGTTCTGCGCGAAGTGAGCAATCGCGATGACGTTGAACAACGTCTGATCGATATTTGCGTAAAAGGTGTACCGAACTACTTCGGTGCCCAACGTTTTGGGATTGGCGGTAGCAACTTGCAGGGGGCGCAGCGCTGGGCGCAAACCAATACTCCGGTGCGCGATCGCAATAAACGGAGTTTTTGGTTGTCGGCAGCCCGCAGTGCGTTGTTTAATCAGATTGTTGCTGAGCGCCTCAAAAAAGCAGACGTTAATCAAGTTGTTGACGGCGATGCGCTACAATTAGCCGGACGTGGTAGCTGGTTTGTCGCAACCACCGAAGAACTGGCGGAATTACAGCGTCGCGTCAACGATAAAGAGTTGATGATAACCGCCGCATTGCCAGGCAGTGGCGAATGGGGAACTCAGCGTGAAGCGCTGGCATTCGAACAAGCAGCTGTCGCCGCAGAAACTGAATTACAAGCTTTACTGGTGCGCGAAAAAGTTGAAGCCGCGCGCAGAGCGATGCTGCTGTATCCGCAACAATTAAGCTGGAATTGGTGGGATGACGTCACCGTAGAGATCCGTTTCTGGCTTCCGGCGGGTAGTTTTGCAACCAGCGTTGTCAGGGAACTTATCAACACAACAGGTGATTATGCGCATATTGCTGAGTAA", - "dna_sequence_length": 1050, - "functions": [ - "tRNA(Glu) pseudouridine(13) synthase" - ], - "id": "CDS_2708", - "location": [ - [ - "NC_000913", - 2871304, - "-", - 1050 - ] - ], - "md5": "e4bf3af645c5fc2d63be1aec31c92e3c", - "parent_gene": "", - "protein_md5": "cc5959dd650c7d726086e66fefc68c5e", - "protein_translation": "MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE", - "protein_translation_length": 349, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945057" - ], - [ - "gene_synonym", - "ECK2741" - ], - [ - "gene_synonym", - "GI:16130653" - ], - [ - "gene_synonym", - "NP_417226.1" - ], - [ - "gene_synonym", - "b2746" - ], - [ - "gene_synonym", - "JW2716" - ], - [ - "gene_synonym", - "ygbB" - ], - [ - "gene_synonym", - "ASAP:ABE-0009013" - ], - [ - "gene_synonym", - "ispF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P62617" - ], - [ - "gene_synonym", - "EcoGene:EG11816" - ] - ], - "dna_sequence": "ATGCGAATTGGACACGGTTTTGACGTACATGCCTTTGGCGGTGAAGGCCCAATTATCATTGGTGGCGTACGCATTCCTTACGAAAAAGGATTGCTGGCGCATTCTGATGGCGACGTGGCGCTCCATGCGTTGACCGATGCATTGCTTGGCGCGGCGGCGCTGGGGGATATCGGCAAGCTGTTCCCGGATACCGATCCGGCATTTAAAGGTGCCGATAGCCGCGAGCTGCTACGCGAAGCCTGGCGTCGTATTCAGGCGAAGGGTTATACCCTTGGCAACGTCGATGTCACTATCATCGCTCAGGCACCGAAGATGTTGCCGCACATTCCACAAATGCGCGTGTTTATTGCCGAAGATCTCGGCTGCCATATGGATGATGTTAACGTGAAAGCCACTACTACGGAAAAACTGGGATTTACCGGACGTGGGGAAGGGATTGCCTGTGAAGCGGTGGCGCTACTCATTAAGGCAACAAAATGA", - "dna_sequence_length": 480, - "functions": [ - "2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase" - ], - "id": "CDS_2709", - "location": [ - [ - "NC_000913", - 2871780, - "-", - 480 - ] - ], - "md5": "7db708a0ed6554368fd576f116ce1722", - "parent_gene": "", - "protein_md5": "1474cda41f35e53ff58f26dc76c9adc5", - "protein_translation": "MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK", - "protein_translation_length": 159, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygbP" - ], - [ - "gene_synonym", - "ECK2742" - ], - [ - "gene_synonym", - "b2747" - ], - [ - "gene_synonym", - "NP_417227.1" - ], - [ - "gene_synonym", - "GI:16130654" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46893" - ], - [ - "gene_synonym", - "GeneID:948269" - ], - [ - "gene_synonym", - "ASAP:ABE-0009017" - ], - [ - "gene_synonym", - "JW2717" - ], - [ - "gene_synonym", - "EcoGene:EG13110" - ], - [ - "gene_synonym", - "ispD" - ] - ], - "dna_sequence": "ATGGCAACCACTCATTTGGATGTTTGCGCCGTGGTTCCGGCGGCCGGATTTGGCCGTCGAATGCAAACGGAATGTCCTAAGCAATATCTCTCAATCGGTAATCAAACCATTCTTGAACACTCGGTGCATGCGCTGCTGGCGCATCCCCGGGTGAAACGTGTCGTCATTGCCATAAGTCCTGGCGATAGCCGTTTTGCACAACTTCCTCTGGCGAATCATCCGCAAATCACCGTTGTAGATGGCGGTGATGAGCGTGCCGATTCCGTGCTGGCAGGTCTGAAAGCCGCTGGCGACGCGCAGTGGGTATTGGTGCATGACGCCGCTCGTCCTTGTTTGCATCAGGATGACCTCGCGCGATTGTTGGCGTTGAGCGAAACCAGCCGCACGGGGGGGATCCTCGCCGCACCAGTGCGCGATACTATGAAACGTGCCGAACCGGGCAAAAATGCCATTGCTCATACCGTTGATCGCAACGGCTTATGGCACGCGCTGACGCCGCAATTTTTCCCTCGTGAGCTGTTACATGACTGTCTGACGCGCGCTCTAAATGAAGGCGCGACTATTACCGACGAAGCCTCGGCGCTGGAATATTGCGGATTCCATCCTCAGTTGGTCGAAGGCCGTGCGGATAACATTAAAGTCACGCGCCCGGAAGATTTGGCACTGGCCGAGTTTTACCTCACCCGAACCATCCATCAGGAGAATACATAA", - "dna_sequence_length": 711, - "functions": [ - "4-diphosphocytidyl-2C-methyl-D-erythritol synthase" - ], - "id": "CDS_2710", - "location": [ - [ - "NC_000913", - 2872490, - "-", - 711 - ] - ], - "md5": "2c53f0e6c1635345ba0df0990c883dfc", - "parent_gene": "", - "protein_md5": "3aafe2206d465d52770b771f2cda519c", - "protein_translation": "MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT", - "protein_translation_length": 236, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2718" - ], - [ - "gene_synonym", - "b2748" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6S5" - ], - [ - "gene_synonym", - "NP_417228.1" - ], - [ - "gene_synonym", - "ygbQ" - ], - [ - "gene_synonym", - "GeneID:946033" - ], - [ - "gene_synonym", - "ECK2743" - ], - [ - "gene_synonym", - "GI:16130655" - ], - [ - "gene_synonym", - "EcoGene:EG13111" - ], - [ - "gene_synonym", - "ASAP:ABE-0009019" - ], - [ - "gene_synonym", - "ftsB" - ] - ], - "dna_sequence": "ATGGGTAAACTAACGCTGCTGTTGCTGGCTATTCTGGTCTGGCTACAGTATTCGCTGTGGTTCGGTAAGAACGGTATACATGACTATACCCGCGTCAATGATGATGTGGCGGCACAGCAAGCTACAAACGCGAAACTTAAAGCGCGAAACGATCAACTTTTTGCCGAAATTGACGATCTCAATGGCGGCCAGGAGGCGCTCGAAGAGCGTGCGCGTAATGAACTCAGCATGACCAGGCCGGGCGAAACTTTTTATCGTCTGGTGCCTGACGCGTCGAAGCGCGCACAGTCTGCGGGGCAAAACAATCGATAA", - "dna_sequence_length": 312, - "functions": [ - "cell division protein" - ], - "id": "CDS_2711", - "location": [ - [ - "NC_000913", - 2872820, - "-", - 312 - ] - ], - "md5": "6726c428568d5f3c42af555ffdadab94", - "parent_gene": "", - "protein_md5": "bee8a9d02e03015c15fe1ba853b07055", - "protein_translation": "MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR", - "protein_translation_length": 103, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2719" - ], - [ - "gene_synonym", - "b2749" - ], - [ - "gene_synonym", - "ECK2744" - ], - [ - "gene_synonym", - "GI:16130656" - ], - [ - "gene_synonym", - "ygbE" - ], - [ - "gene_synonym", - "NP_417229.1" - ], - [ - "gene_synonym", - "GeneID:947268" - ], - [ - "gene_synonym", - "EcoGene:EG12707" - ], - [ - "gene_synonym", - "ASAP:ABE-0009021" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46141" - ] - ], - "dna_sequence": "ATGCGTAATAGCCATAACATTACACTAACAAATAACGACAGCCTTACTGAGGATGAAGAAACCACATGGTCACTGCCTGGTGCCGTGGTCGGTTTTATCTCCTGGTTATTTGCGCTGGCGATGCCGATGTTGATTTATGGCTCTAACACGCTGTTCTTCTTTATCTACACCTGGCCTTTCTTTCTGGCGCTGATGCCCGTCGCGGTAGTGGTGGGGATTGCGCTGCATTCATTGATGGACGGAAAGCTACGCTACAGTATTGTTTTCACCCTGGTGACAGTAGGCATTATGTTTGGCGCACTGTTTATGTGGCTACTGGGCTAA", - "dna_sequence_length": 324, - "functions": [ - "DUF3561 family inner membrane protein" - ], - "id": "CDS_2712", - "location": [ - [ - "NC_000913", - 2873337, - "-", - 324 - ] - ], - "md5": "e469f4e8b70eb258e9aff0c2514fa217", - "parent_gene": "", - "protein_md5": "e2b987a10d0bacc61f47994a9bbc71b2", - "protein_translation": "MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG", - "protein_translation_length": 107, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417230.1" - ], - [ - "gene_synonym", - "b2750" - ], - [ - "gene_synonym", - "ECK2745" - ], - [ - "gene_synonym", - "GI:16130657" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6J1" - ], - [ - "gene_synonym", - "JW2720" - ], - [ - "gene_synonym", - "cysC" - ], - [ - "gene_synonym", - "GeneID:947221" - ], - [ - "gene_synonym", - "EcoGene:EG10185" - ], - [ - "gene_synonym", - "ASAP:ABE-0009023" - ] - ], - "dna_sequence": "ATGGCGCTGCATGACGAAAACGTCGTCTGGCATAGCCATCCGGTCACTGTGCAACAACGCGAGCTACACCACGGTCATCGTGGTGTAGTGCTGTGGTTTACCGGCCTCTCCGGGTCCGGTAAATCAACGGTCGCCGGGGCGCTGGAGGAGGCGTTACATAAACTCGGCGTCAGTACGTATCTGCTGGATGGCGACAATGTTCGCCACGGATTATGCAGCGATCTCGGTTTTAGCGATGCCGATCGTAAAGAGAATATCCGTCGCGTCGGTGAAGTGGCGAATTTGATGGTTGAAGCCGGACTGGTGGTGCTGACCGCATTTATCTCGCCACACCGCGCCGAACGCCAGATGGTTCGCGAACGCGTAGGAGAAGGGCGCTTTATCGAAGTGTTTGTCGATACGCCGCTGGCGATTTGCGAAGCCCGCGATCCCAAAGGCTTATATAAGAAAGCGCGTGCCGGTGAACTGCGCAACTTTACGGGAATAGATTCCGTTTACGAAGCGCCTGAATCGGCAGAAATTCATCTCAATGGTGAACAATTAGTAACAAATTTGGTACAGCAATTATTAGATCTGTTGAGACAGAACGATATTATCAGATCCTGA", - "dna_sequence_length": 606, - "functions": [ - "adenosine 5'-phosphosulfate kinase" - ], - "id": "CDS_2713", - "location": [ - [ - "NC_000913", - 2873992, - "-", - 606 - ] - ], - "md5": "4ad04fd875db4143aae6a150b71f7b4b", - "parent_gene": "", - "protein_md5": "e76736719b951c91dc283a3fd5205c58", - "protein_translation": "MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS", - "protein_translation_length": 201, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130658" - ], - [ - "gene_synonym", - "NP_417231.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23845" - ], - [ - "gene_synonym", - "b2751" - ], - [ - "gene_synonym", - "ECK2746" - ], - [ - "gene_synonym", - "EcoGene:EG10194" - ], - [ - "gene_synonym", - "cysN" - ], - [ - "gene_synonym", - "JW2721" - ], - [ - "gene_synonym", - "ASAP:ABE-0009026" - ], - [ - "gene_synonym", - "GeneID:947219" - ] - ], - "dna_sequence": "ATGAACACCGCACTTGCACAACAAATCGCCAATGAAGGCGGCGTCGAAGCCTGGATGATTGCGCAACAACATAAAAGCCTGCTGCGTTTTCTGACCTGTGGTAGCGTCGATGACGGCAAAAGTACTCTGATTGGTCGTCTGCTGCACGATACCCGCCAAATCTACGAAGATCAGCTCTCATCGCTGCATAACGACAGTAAGCGTCACGGCACCCAGGGCGAAAAGCTGGATCTGGCTCTGCTGGTGGACGGCCTGCAAGCTGAGCGCGAACAGGGCATCACCATTGACGTGGCCTACCGCTATTTCTCTACCGAGAAGCGTAAATTTATTATCGCCGACACCCCAGGGCACGAGCAGTACACCCGCAATATGGCGACTGGCGCATCGACATGTGAACTGGCGATCTTACTGATCGATGCCCGTAAAGGCGTGCTCGATCAAACCCGTCGTCACAGTTTTATCTCCACACTGTTGGGGATCAAACATCTGGTCGTGGCGATCAACAAAATGGATCTGGTGGATTACAGTGAAGAGACGTTCACCCGTATTCGTGAAGATTATTTGACCTTTGCCGGGCAGCTGCCGGGTAATCTGGATATCCGCTTTGTGCCGCTCTCTGCACTGGAAGGCGACAACGTGGCATCGCAAAGTGAAAGTATGCCGTGGTACAGCGGTCCGACACTGCTCGAAGTGCTGGAAACCGTGGAGATCCAGCGAGTGGTGGATGCTCAGCCAATGCGCTTCCCGGTGCAGTACGTTAATCGCCCGAATCTCGATTTTCGTGGTTACGCCGGAACGCTGGCATCCGGTCGCGTGGAAGTCGGGCAACGTGTCAAAGTGCTGCCCTCTGGTGTGGAATCAAACGTCGCGCGGATCGTGACTTTTGATGGTGATCGCGAAGAAGCCTTTGCCGGAGAAGCGATCACCCTGGTGCTGACGGATGAGATCGACATCAGCCGTGGCGATCTGCTGCTGGCGGCAGACGAAGCGTTACCGGCGGTGCAGAGCGCGTCGGTGGATGTGGTATGGATGGCGGAACAGCCGCTTTCTCCAGGGCAGAGTTACGACATCAAAATTGCCGGTAAGAAGACGCGCGCGCGTGTTGATGGCATTCGCTATCAGGTTGATATTAATAACCTTACCCAGCGTGAAGTTGAAAACCTGCCACTGAATGGGATCGGCCTCGTGGATCTCACTTTTGACGAGCCGCTGGTGTTAGATCGTTATCAACAAAATCCGGTGACGGGTGGGCTGATTTTTATCGATCGCCTGAGCAATGTGACCGTGGGTGCCGGTATGGTGCACGAGCCAGTTAGCCAGGCAACTGCTGCGCCATCTGAATTCAGTGCATTCGAACTGGAATTGAATGCTCTGGTTCGTCGCCACTTTCCGCACTGGGGCGCGCGCGATTTGCTGGGGGATAAATAA", - "dna_sequence_length": 1428, - "functions": [ - "sulfate adenylyltransferase, subunit 1" - ], - "id": "CDS_2714", - "location": [ - [ - "NC_000913", - 2875419, - "-", - 1428 - ] - ], - "md5": "0d6d9077184f955ae203dfd9a2314753", - "parent_gene": "", - "protein_md5": "7b018704e074fee34e7a5f6016618c09", - "protein_translation": "MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK", - "protein_translation_length": 475, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130659" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21156" - ], - [ - "gene_synonym", - "cysD" - ], - [ - "gene_synonym", - "b2752" - ], - [ - "gene_synonym", - "ECK2747" - ], - [ - "gene_synonym", - "GeneID:947217" - ], - [ - "gene_synonym", - "NP_417232.1" - ], - [ - "gene_synonym", - "JW2722" - ], - [ - "gene_synonym", - "ASAP:ABE-0009029" - ], - [ - "gene_synonym", - "EcoGene:EG10186" - ] - ], - "dna_sequence": "ATGGATCAAATACGACTTACTCACCTGCGGCAACTGGAGGCGGAAAGCATCCACATTATTCGCGAGGTGGCGGCAGAATTCTCAAATCCGGTGATGCTCTACTCTATCGGTAAAGATTCCAGCGTCATGCTGCATCTGGCGCGCAAGGCGTTTTATCCAGGTACGCTGCCTTTCCCGTTGCTGCATGTCGATACCGGCTGGAAATTCCGCGAGATGTATGAGTTCCGCGATCGTACTGCTAAAGCCTACGGCTGCGAACTGCTGGTGCATAAAAACCCGGAAGGCGTGGCGATGGGGATTAATCCATTCGTGCACGGCAGCGCGAAACATACCGATATTATGAAAACTGAAGGCCTGAAACAGGCGCTGAACAAATACGGTTTTGATGCCGCCTTCGGTGGTGCGCGCCGTGACGAAGAGAAATCCCGCGCTAAAGAGCGAATTTACTCTTTCCGTGACCGCTTCCATCGCTGGGATCCGAAAAATCAGCGCCCGGAGCTGTGGCACAACTACAACGGGCAAATTAACAAAGGCGAAAGCATCCGCGTCTTCCCGCTCTCTAACTGGACCGAGCAGGATATCTGGCAATACATCTGGCTGGAAAATATCGACATTGTTCCGCTATATCTCGCTGCGGAACGTCCGGTTCTGGAACGCGACGGTATGTTGATGATGATTGATGACAACCGTATCGACCTGCAACCGGGCGAAGTGATTAAAAAACGGATGGTGCGTTTCCGTACGCTGGGCTGCTGGCCGCTGACCGGTGCGGTGGAGTCAAATGCACAAACACTGCCGGAAATCATCGAAGAGATGCTGGTTTCCACCACCAGTGAACGTCAGGGCCGCGTGATTGACCGCGACCAGGCGGGGTCTATGGAGCTGAAAAAACGTCAGGGGTATTTTTAA", - "dna_sequence_length": 909, - "functions": [ - "sulfate adenylyltransferase, subunit 2" - ], - "id": "CDS_2715", - "location": [ - [ - "NC_000913", - 2876329, - "-", - 909 - ] - ], - "md5": "76589efa302ef10026e7fd8f3a3e3322", - "parent_gene": "", - "protein_md5": "1086d0197327cf387ccba41b7da9b310", - "protein_translation": "MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF", - "protein_translation_length": 302, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947215" - ], - [ - "gene_synonym", - "ECK2748" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10423" - ], - [ - "gene_synonym", - "b2753" - ], - [ - "gene_synonym", - "EcoGene:EG10488" - ], - [ - "gene_synonym", - "NP_417233.1" - ], - [ - "gene_synonym", - "GI:16130660" - ], - [ - "gene_synonym", - "JW2723" - ], - [ - "gene_synonym", - "ASAP:ABE-0009033" - ], - [ - "gene_synonym", - "iap" - ] - ], - "dna_sequence": "ATGTTTTCCGCATTGCGCCACCGTACCGCTGCCCTGGCGCTCGGCGTATGCTTTATTCTCCCCGTACACGCCTCGTCACCTAAACCTGGCGATTTTGCTAATACTCAGGCACGACATATTGCTACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTCGCCAACAGTTTCAGCAAATGGGTTATCGCAGTGATATTCGGACATTTAATAGTCGGTATATTTATACCGCCCGCGATAATCGTAAGAGCTGGCATAACGTGACGGGAAGTACGGTGATTGCCGCTCATGAAGGCAAAGCGCCGCAGCAGATCATCATTATGGCGCATCTGGATACTTACGCCCCGCTGAGCGATGCTGACGCCGATGCCAATCTCGGCGGGCTGACGTTACAAGGAATGGATGATAACGCCGCAGGTTTAGGTGTCATGCTGGAATTGGCAGAACGCCTGAAAAATACGCCTACCGAGTATGGTATTCGATTTGTGGCGACCAGCGGCGAAGAGGAAGGGAAATTAGGCGCTGAGAATTTACTCAAGCGGATGAGTGACACCGAAAAGAAAAATACGCTGCTGGTGATTAATCTCGATAACTTAATTGTTGGCGATAAATTGTATTTCAACAGCGGTGTAAAAACCCCTGAGGCAGTAAGGAAATTAACGCGCGACAGGGCGCTGGCAATTGCGCGCAGTCACGGAATAGCCGCAACGACCAATCCGGGTTTGAATAAAAATTATCCGAAAGGCACTGGGTGTTGTAATGACGCAGAAATATTCGACAAAGCGGGCATTGCTGTACTTTCGGTGGAAGCGACTAACTGGAATCTTGGGAATAAGGATGGTTATCAGCAACGCGCAAAAACACCTGCCTTCCCGGCGGGAAATAGCTGGCATGACGTAAGACTGGATAATCACCAACATATTGATAAGGCTCTTCCTGGAAGAATAGAACGTCGCTGCCGTGACGTTATGCGGATAATGCTACCTCTGGTGAAGGAGTTGGCGAAGGCGTCTTGA", - "dna_sequence_length": 1038, - "functions": [ - "aminopeptidase in alkaline phosphatase isozyme conversion" - ], - "id": "CDS_2716", - "location": [ - [ - "NC_000913", - 2876581, - "+", - 1038 - ] - ], - "md5": "27684ed4db3e72179ea77e1df2561d63", - "parent_gene": "", - "protein_md5": "e46ac4b63d49f23165165f8fa15d32ab", - "protein_translation": "MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTPAFPAGNSWHDVRLDNHQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS", - "protein_translation_length": 345, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2749" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45956" - ], - [ - "gene_synonym", - "EcoGene:EG12845" - ], - [ - "gene_synonym", - "JW5438" - ], - [ - "gene_synonym", - "GeneID:947213" - ], - [ - "gene_synonym", - "b2754" - ], - [ - "gene_synonym", - "ygbF" - ], - [ - "gene_synonym", - "GI:90111482" - ], - [ - "gene_synonym", - "cas2" - ], - [ - "gene_synonym", - "NP_417234.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0009036" - ] - ], - "dna_sequence": "ATGAGTATGTTGGTCGTGGTCACTGAAAATGTACCTCCGCGCTTACGAGGCAGATTAGCCATCTGGTTGTTGGAGGTACGTGCAGGGGTATATGTAGGTGATGTATCCGCAAAAATTCGTGAAATGATCTGGGAACAAATAGCTGGACTGGCGGAAGAAGGCAATGTAGTGATGGCATGGGCAACGAATACGGAAACGGGATTTGAGTTCCAGACATTTGGGTTAAACAGGCGTACCCCGGTAGATTTGGATGGTTTAAGGTTGGTGTCTTTTTTACCTGTTTGA", - "dna_sequence_length": 285, - "functions": [ - "CRISPR adaptation ssRNA endonuclease" - ], - "id": "CDS_2717", - "location": [ - [ - "NC_000913", - 2878853, - "-", - 285 - ] - ], - "md5": "d4c477ef1e543a28ac3b66959f1ec134", - "parent_gene": "", - "protein_md5": "158529f765b5535e806e79519444a89a", - "protein_translation": "MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTETGFEFQTFGLNRRTPVDLDGLRLVSFLPV", - "protein_translation_length": 94, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygbT" - ], - [ - "gene_synonym", - "GI:16130662" - ], - [ - "gene_synonym", - "NP_417235.1" - ], - [ - "gene_synonym", - "b2755" - ], - [ - "gene_synonym", - "JW2725" - ], - [ - "gene_synonym", - "ASAP:ABE-0009038" - ], - [ - "gene_synonym", - "EcoGene:EG13114" - ], - [ - "gene_synonym", - "cas1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46896" - ], - [ - "gene_synonym", - "ECK2750" - ], - [ - "gene_synonym", - "GeneID:947228" - ] - ], - "dna_sequence": "ATGACCTGGCTTCCCCTTAATCCCATTCCACTCAAAGATCGCGTCTCCATGATCTTTCTGCAATATGGGCAGATCGATGTAATAGATGGCGCGTTTGTACTTATCGACAAGACAGGGATCCGCACTCATATTCCTGTTGGCTCGGTTGCCTGCATCATGCTGGAACCTGGTACACGGGTTTCGCATGCAGCTGTACGCCTGGCTGCGCAAGTTGGAACATTGTTGGTATGGGTGGGGGAAGCGGGCGTTCGTGTTTATGCTTCTGGTCAGCCTGGAGGTGCGCGTTCAGATAAGCTGCTCTATCAGGCAAAACTTGCTCTGGATGAAGATTTGCGTCTGAAGGTCGTACGTAAAATGTTTGAACTTCGGTTTGGAGAACCTGCGCCTGCCCGGCGCTCCGTAGAGCAACTCAGAGGTATAGAAGGCAGTCGCGTGCGGGCAACCTACGCACTTCTGGCGAAGCAATACGGCGTGACATGGAATGGACGTCGCTACGATCCGAAAGACTGGGAAAAGGGCGATACGATCAACCAATGCATTAGCGCTGCAACTTCCTGTTTATACGGCGTAACTGAAGCGGCGATACTTGCAGCTGGTTATGCACCAGCTATTGGGTTTGTGCATACAGGAAAGCCTCTTTCCTTTGTTTACGATATTGCAGACATCATTAAATTTGACACTGTTGTACCGAAAGCTTTTGAGATAGCGCGTCGTAACCCTGGTGAGCCGGACCGGGAAGTCCGTTTGGCGTGCAGGGATATTTTTCGCAGTAGTAAAACATTAGCCAAATTGATTCCGCTTATAGAGGACGTGCTTGCCGCTGGAGAAATACAACCGCCGGCCCCACCTGAAGATGCACAGCCTGTTGCCATTCCGCTTCCTGTTTCACTGGGAGATGCAGGCCATCGGAGTAGCTGA", - "dna_sequence_length": 918, - "functions": [ - "multifunctional endonuclease Cas1, CRISPR adaptation protein", - "DNA repair enzyme" - ], - "id": "CDS_2718", - "location": [ - [ - "NC_000913", - 2879772, - "-", - 918 - ] - ], - "md5": "06ce46927cf52779bdef949cfdb2eb01", - "parent_gene": "", - "protein_md5": "af7302e3205daf5bbe4f76dc4289bd08", - "protein_translation": "MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS", - "protein_translation_length": 305, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "casE" - ], - [ - "gene_synonym", - "cas6e" - ], - [ - "gene_synonym", - "NP_417236.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009042" - ], - [ - "gene_synonym", - "GI:16130663" - ], - [ - "gene_synonym", - "EcoGene:EG13115" - ], - [ - "gene_synonym", - "b2756" - ], - [ - "gene_synonym", - "JW2726" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46897" - ], - [ - "gene_synonym", - "cse3" - ], - [ - "gene_synonym", - "ECK2751" - ], - [ - "gene_synonym", - "ygcH" - ], - [ - "gene_synonym", - "GeneID:947226" - ] - ], - "dna_sequence": "ATGTATCTCAGTAAAGTCATCATTGCCAGGGCCTGGAGCAGGGATCTTTACCAACTTCACCAGGGATTATGGCATTTATTTCCAAACAGACCGGATGCTGCTCGTGATTTTCTTTTTCATGTTGAGAAGCGAAACACACCAGAAGGCTGTCATGTTTTATTGCAGTCAGCGCAAATGCCTGTTTCAACTGCCGTTGCGACAGTCATTAAAACTAAACAGGTTGAATTTCAACTTCAGGTTGGTGTTCCACTCTATTTTCGGCTTCGGGCAAATCCGATCAAAACTATTCTCGACAATCAAAAGCGCCTGGACAGTAAAGGGAATATTAAACGCTGTCGGGTTCCGTTAATAAAAGAAGCAGAACAAATCGCGTGGTTGCAACGTAAATTGGGCAATGCGGCGCGCGTTGAAGATGTGCATCCCATATCGGAACGGCCACAGTATTTTTCTGGTGATGGTAAAAGTGGAAAGATCCAAACGGTTTGCTTTGAAGGTGTGCTCACCATCAACGACGCGCCAGCGTTAATAGATCTTGTACAGCAAGGTATTGGGCCAGCTAAATCGATGGGATGTGGCTTGCTATCTTTGGCTCCACTGTGA", - "dna_sequence_length": 600, - "functions": [ - "CRISPR RNA precursor cleavage enzyme", - "CRISP RNA (crRNA) containing Cascade antiviral complex protein" - ], - "id": "CDS_2719", - "location": [ - [ - "NC_000913", - 2880387, - "-", - 600 - ] - ], - "md5": "9506f9b8ac4f811ab0f2603b2f0ae82b", - "parent_gene": "", - "protein_md5": "d8fe9d94db8fdd58b00feb6183ef3156", - "protein_translation": "MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVLTINDAPALIDLVQQGIGPAKSMGCGLLSLAPL", - "protein_translation_length": 199, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "casD" - ], - [ - "gene_synonym", - "GI:90111483" - ], - [ - "gene_synonym", - "b2757" - ], - [ - "gene_synonym", - "ASAP:ABE-0009044" - ], - [ - "gene_synonym", - "cas5" - ], - [ - "gene_synonym", - "EcoGene:EG13116" - ], - [ - "gene_synonym", - "JW5844" - ], - [ - "gene_synonym", - "NP_417237.2" - ], - [ - "gene_synonym", - "ygcI" - ], - [ - "gene_synonym", - "ECK2752" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46898" - ], - [ - "gene_synonym", - "GeneID:947225" - ] - ], - "dna_sequence": "ATGAGATCTTATTTGATCTTGCGGCTTGCTGGGCCAATGCAAGCCTGGGGGCAGCCGACCTTTGAAGGAACGCGACCTACCGGAAGATTTCCGACCCGAAGCGGGTTATTAGGGCTACTCGGGGCTTGTCTTGGGATCCAACGTGATGATACTTCTTCATTACAGGCGTTATCAGAGAGTGTGCAATTTGCAGTGCGCTGCGATGAACTCATTCTTGACGATCGTCGTGTGTCTGTAACGGGGTTGCGTGATTACCATACAGTCCTTGGAGCGCGAGAAGATTACCGTGGTTTGAAAAGTCATGAAACGATTCAAACATGGCGCGAATATTTATGTGATGCCTCCTTTACCGTCGCTCTCTGGTTAACACCCCATGCAACGATGGTTATCTCAGAACTTGAAAAAGCAGTATTAAAGCCTCGGTATACACCTTACCTGGGGCGGAGAAGTTGCCCACTAACACACCCGCTTTTTTTGGGGACATGTCAGGCATCGGATCCTCAGAAGGCGCTATTAAATTATGAGCCCGTTGGCGGCGATATATATAGTGAGGAATCAGTTACAGGGCATCATTTAAAATTTACGGCGCGCGACGAACCGATGATCACCTTGCCTCGACAATTTGCTTCCCGAGAATGGTATGTGATTAAAGGAGGTATGGATGTATCTCAGTAA", - "dna_sequence_length": 675, - "functions": [ - "CRISP RNA (crRNA) containing Cascade antiviral complex protein" - ], - "id": "CDS_2720", - "location": [ - [ - "NC_000913", - 2881048, - "-", - 675 - ] - ], - "md5": "d145ba1bf6005d0d2759fd479ec9ddc5", - "parent_gene": "", - "protein_md5": "7e08b0e625ac18eec9090f0a765c0e70", - "protein_translation": "MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ", - "protein_translation_length": 224, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2758" - ], - [ - "gene_synonym", - "casC" - ], - [ - "gene_synonym", - "cas4" - ], - [ - "gene_synonym", - "ASAP:ABE-0009046" - ], - [ - "gene_synonym", - "GI:16130665" - ], - [ - "gene_synonym", - "EcoGene:EG13117" - ], - [ - "gene_synonym", - "cse4" - ], - [ - "gene_synonym", - "cas7" - ], - [ - "gene_synonym", - "ECK2753" - ], - [ - "gene_synonym", - "GeneID:947224" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46899" - ], - [ - "gene_synonym", - "ygcJ" - ], - [ - "gene_synonym", - "JW2728" - ], - [ - "gene_synonym", - "NP_417238.1" - ] - ], - "dna_sequence": "ATGTCTAACTTTATCAATATTCATGTTCTGATCTCTCACAGCCCTTCATGTCTGAACCGCGACGATATGAACATGCAGAAAGACGCTATTTTCGGCGGCAAAAGACGAGTAAGAATTTCAAGTCAAAGCCTTAAACGTGCGATGCGTAAAAGTGGTTATTACGCACAAAATATTGGTGAATCCAGTCTCAGAACCATTCATCTTGCACAATTACGTGATGTTCTTCGGCAAAAACTTGGTGAACGTTTTGACCAAAAAATCATCGATAAGACATTAGCGCTGCTCTCCGGTAAATCAGTTGATGAAGCCGAAAAGATTTCTGCCGATGCGGTTACTCCCTGGGTTGTGGGAGAAATAGCCTGGTTCTGTGAGCAGGTTGCAAAAGCAGAGGCTGATAATCTGGATGATAAAAAGCTGCTCAAAGTTCTTAAGGAAGATATTGCCGCCATACGTGTGAATTTACAGCAGGGTGTTGATATTGCGCTTAGTGGAAGAATGGCAACCAGCGGCATGATGACTGAGTTGGGAAAAGTTGATGGTGCAATGTCCATTGCGCATGCGATCACTACTCATCAGGTTGATTCTGATATTGACTGGTTCACCGCTGTAGATGATTTACAGGAACAAGGTTCTGCACATCTGGGAACTCAGGAATTTTCATCGGGTGTTTTTTATCGTTATGCCAACATTAACCTCGCTCAACTTCAGGAAAATTTAGGTGGTGCCTCCAGGGAGCAGGCTCTGGAAATTGCAACCCATGTTGTTCATATGCTGGCAACAGAGGTCCCTGGAGCAAAACAGCGTACTTATGCCGCTTTTAACCCTGCGGATATGGTAATGGTTAATTTCTCCGATATGCCACTTTCTATGGCAAATGCTTTTGAAAAAGCGGTTAAAGCGAAAGATGGCTTTTTGCAACCGTCTATACAGGCGTTTAATCAATATTGGGATCGCGTTGCCAATGGATATGGTCTGAACGGAGCTGCTGCGCAATTCAGCTTATCTGATGTAGACCCAATTACTGCTCAAGTTAAACAAATGCCTACTTTAGAACAGTTAAAATCCTGGGTTCGTAATAATGGCGAGGCGTGA", - "dna_sequence_length": 1092, - "functions": [ - "CRISP RNA (crRNA) containing Cascade antiviral complex protein" - ], - "id": "CDS_2721", - "location": [ - [ - "NC_000913", - 2882142, - "-", - 1092 - ] - ], - "md5": "76a0e6d9411e39e07b9cb30050b7fe05", - "parent_gene": "", - "protein_md5": "aa02f3e5d9249d9ea5bd86b08d4a7c23", - "protein_translation": "MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSGYYAQNIGESSLRTIHLAQLRDVLRQKLGERFDQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDIALSGRMATSGMMTELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLGGASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKAKDGFLQPSIQAFNQYWDRVANGYGLNGAAAQFSLSDVDPITAQVKQMPTLEQLKSWVRNNGEA", - "protein_translation_length": 363, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2759" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76632" - ], - [ - "gene_synonym", - "ASAP:ABE-0009048" - ], - [ - "gene_synonym", - "casB" - ], - [ - "gene_synonym", - "GI:16130666" - ], - [ - "gene_synonym", - "ECK2754" - ], - [ - "gene_synonym", - "cse2" - ], - [ - "gene_synonym", - "ygcK" - ], - [ - "gene_synonym", - "NP_417239.1" - ], - [ - "gene_synonym", - "JW2729" - ], - [ - "gene_synonym", - "GeneID:947223" - ], - [ - "gene_synonym", - "EcoGene:EG13118" - ] - ], - "dna_sequence": "ATGGCTGATGAAATTGATGCAATGGCTTTATATCGAGCCTGGCAACAACTGGATAATGGATCATGTGCGCAAATTAGACGTGTTTCAGAACCTGATGAATTACGCGATATCCCTGCGTTTTATAGGCTGGTGCAACCTTTTGGTTGGGAAAACCCACGTCACCAGCAGGCTCTTTTGCGCATGGTGTTTTGCCTGAGCGCAGGAAAGAATGTCATCCGACATCAGGACAAAAAATCGGAGCAAACAACAGGTATCTCGTTGGGAAGAGCTTTAGCCAATAGTGGAAGAATTAACGAGCGCCGTATCTTTCAATTAATTCGGGCTGACAGAACAGCCGATATGGTCCAGTTACGTCGATTACTTACTCACGCCGAACCCGTACTTGACTGGCCATTAATGGCCAGGATGTTGACCTGGTGGGGAAAGCGCGAACGCCAGCAACTTCTGGAAGATTTTGTATTGACCACAAACAAAAATGCGTAA", - "dna_sequence_length": 483, - "functions": [ - "CRISP RNA (crRNA) containing Cascade antiviral complex protein" - ], - "id": "CDS_2722", - "location": [ - [ - "NC_000913", - 2882637, - "-", - 483 - ] - ], - "md5": "558e2d25a384fadf0bc5f8ad6f78428a", - "parent_gene": "", - "protein_md5": "e3069532a7e1e8ea14bc7bbe805c6db8", - "protein_translation": "MADEIDAMALYRAWQQLDNGSCAQIRRVSEPDELRDIPAFYRLVQPFGWENPRHQQALLRMVFCLSAGKNVIRHQDKKSEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLTHAEPVLDWPLMARMLTWWGKRERQQLLEDFVLTTNKNA", - "protein_translation_length": 160, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46901" - ], - [ - "gene_synonym", - "JW2730" - ], - [ - "gene_synonym", - "casA" - ], - [ - "gene_synonym", - "ASAP:ABE-0009050" - ], - [ - "gene_synonym", - "GI:16130667" - ], - [ - "gene_synonym", - "NP_417240.1" - ], - [ - "gene_synonym", - "b2760" - ], - [ - "gene_synonym", - "ECK2755" - ], - [ - "gene_synonym", - "cse1" - ], - [ - "gene_synonym", - "ygcL" - ], - [ - "gene_synonym", - "EcoGene:EG13119" - ], - [ - "gene_synonym", - "GeneID:947222" - ] - ], - "dna_sequence": "ATGAATTTGCTTATTGATAACTGGATCCCTGTACGCCCGCGAAACGGGGGGAAAGTCCAAATCATAAATCTGCAATCGCTATACTGCAGTAGAGATCAGTGGCGATTAAGTTTGCCCCGTGACGATATGGAACTGGCCGCTTTAGCACTGCTGGTTTGCATTGGGCAAATTATCGCCCCGGCAAAAGATGACGTTGAATTTCGACATCGCATAATGAATCCGCTCACTGAAGATGAGTTTCAACAACTCATCGCGCCGTGGATAGATATGTTCTACCTTAATCACGCAGAACATCCCTTTATGCAGACCAAAGGTGTCAAAGCAAATGATGTGACTCCAATGGAAAAACTGTTGGCTGGGGTAAGCGGCGCGACGAATTGTGCATTTGTCAATCAACCGGGGCAGGGTGAAGCATTATGTGGTGGATGCACTGCGATTGCGTTATTCAACCAGGCGAATCAGGCACCAGGTTTTGGTGGTGGTTTTAAAAGCGGTTTACGTGGAGGAACACCTGTAACAACGTTCGTACGTGGGATCGATCTTCGTTCAACGGTGTTACTCAATGTCCTCACATTACCTCGTCTTCAAAAACAATTTCCTAATGAATCACATACGGAAAACCAACCTACCTGGATTAAACCTATCAAGTCCAATGAGTCTATACCTGCTTCGTCAATTGGGTTTGTCCGTGGTCTATTCTGGCAACCAGCGCATATTGAATTATGCGATCCCATTGGGATTGGTAAATGTTCTTGCTGTGGACAGGAAAGCAATTTGCGTTATACCGGTTTTCTTAAGGAAAAATTTACCTTTACAGTTAATGGGCTATGGCCCCATCCGCATTCCCCTTGTCTGGTAACAGTCAAGAAAGGGGAGGTTGAGGAAAAATTTCTTGCTTTCACCACCTCCGCACCATCATGGACACAAATCAGCCGAGTTGTGGTAGATAAGATTATTCAAAATGAAAATGGAAATCGCGTGGCGGCGGTTGTGAATCAATTCAGAAATATTGCGCCGCAAAGTCCTCTTGAATTGATTATGGGGGGATATCGTAATAATCAAGCATCTATTCTTGAACGGCGTCATGATGTGTTGATGTTTAATCAGGGGTGGCAACAATACGGCAATGTGATAAACGAAATAGTGACTGTTGGTTTGGGATATAAAACAGCCTTACGCAAGGCGTTATATACCTTTGCAGAAGGGTTTAAAAATAAAGACTTCAAAGGGGCCGGAGTCTCTGTTCATGAGACTGCAGAAAGGCATTTCTATCGACAGAGTGAATTATTAATTCCCGATGTACTGGCGAATGTTAATTTTTCCCAGGCTGATGAGGTAATAGCTGATTTACGAGACAAACTTCATCAATTGTGTGAAATGCTATTTAATCAATCTGTAGCTCCCTATGCACATCATCCTAAATTAATAAGCACATTAGCGCTTGCCCGCGCCACGCTATACAAACATTTACGGGAGTTAAAACCGCAAGGAGGGCCATCAAATGGCTGA", - "dna_sequence_length": 1509, - "functions": [ - "CRISP RNA (crRNA) containing Cascade antiviral complex protein" - ], - "id": "CDS_2723", - "location": [ - [ - "NC_000913", - 2884138, - "-", - 1509 - ] - ], - "md5": "8d8ab640081e60da08175b7442511e86", - "parent_gene": "", - "protein_md5": "dbf92f53236c5683550ba739ce081967", - "protein_translation": "MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQPTWIKPIKSNESIPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG", - "protein_translation_length": 502, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009054" - ], - [ - "gene_synonym", - "NP_417241.1" - ], - [ - "gene_synonym", - "ECK2756" - ], - [ - "gene_synonym", - "b2761" - ], - [ - "gene_synonym", - "JW2731" - ], - [ - "gene_synonym", - "ygcB" - ], - [ - "gene_synonym", - "GeneID:947229" - ], - [ - "gene_synonym", - "EcoGene:EG12634" - ], - [ - "gene_synonym", - "cas3" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38036" - ], - [ - "gene_synonym", - "GI:16130668" - ] - ], - "dna_sequence": "ATGGAACCTTTTAAATATATATGCCATTACTGGGGAAAATCCTCAAAAAGCTTGACGAAAGGAAATGATATTCATCTGTTAATTTATCATTGCCTTGATGTTGCTGCTGTTGCAGATTGCTGGTGGGATCAATCAGTCGTACTGCAAAATACTTTTTGCCGAAATGAAATGCTATCAAAACAGAGGGTGAAGGCCTGGCTGTTATTTTTCATTGCTCTTCATGATATTGGAAAGTTTGATATACGATTCCAATATAAATCAGCAGAAAGTTGGCTGAAATTAAATCCTGCAACGCCATCACTTAATGGTCCATCAACACAAATGTGCCGTAAATTTAATCATGGTGCAGCCGGTCTGTATTGGTTTAACCAGGATTCACTTTCAGAGCAATCTCTCGGGGATTTTTTCAGTTTTTTTGATGCCGCTCCTCATCCTTATGAGTCCTGGTTTCCATGGGTAGAGGCCGTTACAGGACATCATGGTTTTATATTACATTCCCAGGATCAAGATAAGTCGCGTTGGGAAATGCCAGCTTCTCTGGCATCTTATGCTGCGCAAGATAAACAGGCTCGTGAGGAGTGGATATCTGTACTGGAAGCATTATTTTTAACGCCAGCGGGGTTATCTATAAACGATATACCACCTGATTGTTCATCACTGTTAGCAGGTTTTTGCTCGCTTGCTGACTGGTTAGGCTCCTGGACTACAACGAATACCTTTCTGTTTAATGAGGATGCGCCTTCCGACATAAATGCTCTGAGAACGTATTTCCAGGACCGACAGCAGGATGCGAGCCGGGTATTGGAGTTGAGTGGACTTGTATCAAATAAGCGATGTTATGAAGGTGTTCATGCACTACTGGACAATGGCTATCAACCCAGACAATTACAGGTGTTAGTTGATGCTCTTCCAGTAGCTCCCGGGCTGACGGTAATAGAGGCACCTACAGGCTCCGGTAAAACGGAAACAGCGCTGGCCTATGCTTGGAAACTTATTGATCAACAAATTGCGGATAGTGTTATTTTTGCCCTCCCAACACAAGCTACCGCGAATGCTATGCTTACGAGAATGGAAGCGAGCGCGAGCCACTTATTTTCATCCCCAAATCTTATTCTTGCTCATGGCAATTCACGGTTTAACCACCTCTTTCAATCAATAAAATCACGCGCGATTACTGAACAGGGGCAAGAAGAAGCGTGGGTTCAGTGTTGTCAGTGGTTGTCACAAAGCAATAAGAAAGTGTTTCTTGGGCAAATCGGCGTTTGCACGATTGATCAGGTGTTGATATCGGTATTGCCAGTTAAACACCGCTTTATCCGTGGTTTGGGAATTGGTCGAAGTGTTTTAATTGTTGATGAAGTTCATGCTTACGACACCTATATGAACGGCTTGCTGGAGGCAGTGCTCAAGGCTCAGGCTGATGTGGGAGGGAGTGTTATTCTTCTTTCCGCAACCCTACCAATGAAACAAAAACAGAAACTTCTGGATACTTATGGTCTGCATACAGATCCAGTGGAAAATAACTCCGCATATCCACTCATTAACTGGCGAGGTGTGAATGGTGCGCAACGTTTTGATCTGCTAGCTCATCCAGAACAACTCCCGCCCCGCTTTTCGATTCAGCCAGAACCTATTTGTTTAGCTGACATGTTACCTGACCTTACGATGTTAGAGCGAATGATCGCAGCGGCAAACGCGGGTGCACAGGTCTGTCTTATTTGCAATTTGGTTGACGTTGCACAAGTATGCTACCAACGGCTAAAGGAGCTAAATAACACGCAAGTAGATATAGATTTGTTTCATGCGCGCTTTACGCTGAACGATCGTCGTGAAAAAGAGAATCGAGTTATTAGCAATTTCGGCAAAAATGGGAAGCGAAATGTTGGACGGATACTTGTCGCAACCCAGGTCGTGGAACAATCACTCGACGTTGATTTTGATTGGTTAATTACTCAGCATTGTCCTGCAGATTTGCTTTTCCAACGATTGGGCCGTTTACATCGCCATCATCGCAAATATCGTCCCGCTGGTTTTGAGATTCCTGTTGCCACCATTTTGCTGCCTGATGGCGAGGGTTACGGACGACATGAGCATATTTATAGCAACGTTAGAGTCATGTGGCGGACGCAGCAACATATTGAGGAGCTTAATGGAGCATCCTTATTTTTCCCTGATGCTTACCGGCAATGGCTGGATAGCATTTACGATGATGCGGAAATGGATGAGCCAGAATGGGTCGGCAATGGCATGGATAAATTTGAAAGCGCCGAGTGTGAAAAAAGGTTCAAGGCTCGCAAGGTCCTGCAGTGGGCTGAAGAATATAGCTTGCAGGATAACGATGAAACCATTCTTGCGGTAACGAGGGATGGGGAAATGAGCCTGCCATTATTGCCTTATGTACAAACGTCTTCAGGTAAACAACTGCTCGATGGCCAGGTCTACGAGGACCTAAGTCATGAACAGCAGTATGAGGCGCTTGCACTTAATCGCGTCAATGTACCCTTCACCTGGAAACGTAGTTTTTCTGAAGTAGTAGATGAAGATGGGTTACTTTGGCTGGAAGGGAAACAGAATCTGGATGGATGGGTCTGGCAGGGTAACAGTATTGTTATTACCTATACAGGGGATGAAGGGATGACCAGAGTCATCCCTGCAAATCCCAAATAA", - "dna_sequence_length": 2667, - "functions": [ - "Cascade complex anti-viral R-loop helicase-annealase Cas3" - ], - "id": "CDS_2724", - "location": [ - [ - "NC_000913", - 2887219, - "-", - 2667 - ] - ], - "md5": "fb2d2ae5036e64d9e5192e0ed049dc74", - "parent_gene": "", - "protein_md5": "82fdcef673701e4a19d8eebbf7a5ad8e", - "protein_translation": "MEPFKYICHYWGKSSKSLTKGNDIHLLIYHCLDVAAVADCWWDQSVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLNGPSTQMCRKFNHGAAGLYWFNQDSLSEQSLGDFFSFFDAAPHPYESWFPWVEAVTGHHGFILHSQDQDKSRWEMPASLASYAAQDKQAREEWISVLEALFLTPAGLSINDIPPDCSSLLAGFCSLADWLGSWTTTNTFLFNEDAPSDINALRTYFQDRQQDASRVLELSGLVSNKRCYEGVHALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENNSAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPICLADMLPDLTMLERMIAAANAGAQVCLICNLVDVAQVCYQRLKELNNTQVDIDLFHARFTLNDRREKENRVISNFGKNGKRNVGRILVATQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHHRKYRPAGFEIPVATILLPDGEGYGRHEHIYSNVRVMWRTQQHIEELNGASLFFPDAYRQWLDSIYDDAEMDEPEWVGNGMDKFESAECEKRFKARKVLQWAEEYSLQDNDETILAVTRDGEMSLPLLPYVQTSSGKQLLDGQVYEDLSHEQQYEALALNRVNVPFTWKRSFSEVVDEDGLLWLEGKQNLDGWVWQGNSIVITYTGDEGMTRVIPANPK", - "protein_translation_length": 888, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cysH" - ], - [ - "gene_synonym", - "JW2732" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17854" - ], - [ - "gene_synonym", - "ASAP:ABE-0009057" - ], - [ - "gene_synonym", - "EcoGene:EG10189" - ], - [ - "gene_synonym", - "ECK2757" - ], - [ - "gene_synonym", - "b2762" - ], - [ - "gene_synonym", - "NP_417242.1" - ], - [ - "gene_synonym", - "GI:16130669" - ], - [ - "gene_synonym", - "GeneID:947230" - ] - ], - "dna_sequence": "ATGTCCAAACTCGATCTAAACGCCCTGAACGAACTGCCGAAGGTAGATCGCATTCTGGCGCTGGCGGAAACTAACGCCGAACTGGAAAAACTGGACGCTGAAGGCCGCGTAGCCTGGGCGCTGGATAATCTGCCCGGTGAATATGTACTTTCTTCCAGCTTTGGCATTCAGGCGGCGGTGAGCCTGCATCTGGTGAATCAAATTCGCCCGGATATTCCGGTGATCCTCACCGATACGGGTTACTTGTTCCCGGAAACCTACCGCTTTATTGACGAGTTAACGGACAAACTCAAGCTCAACCTGAAAGTGTACCGTGCTACCGAAAGCGCAGCCTGGCAGGAAGCACGCTACGGAAAACTGTGGGAGCAGGGCGTTGAAGGCATTGAAAAGTACAATGACATCAACAAAGTCGAACCGATGAACCGGGCTCTGAAAGAACTGAATGCGCAAACCTGGTTTGCTGGCCTGCGCCGTGAACAATCCGGCAGTCGTGCCAATTTACCGGTGCTGGCAATTCAGCGTGGCGTATTTAAAGTGCTGCCGATTATCGACTGGGATAACCGAACTATTTATCAGTACCTGCAAAAACATGGCCTGAAATATCACCCATTATGGGATGAAGGATATTTATCGGTGGGCGATACCCATACAACCCGTAAATGGGAACCCGGCATGGCGGAAGAAGAAACGCGTTTCTTTGGCTTAAAAAGGGAATGTGGGTTACACGAAGGGTAA", - "dna_sequence_length": 735, - "functions": [ - "phosphoadenosine phosphosulfate reductase", - "PAPS reductase, thioredoxin dependent" - ], - "id": "CDS_2725", - "location": [ - [ - "NC_000913", - 2888312, - "-", - 735 - ] - ], - "md5": "9cc9595e0a15607bc6a7f6672862bc4a", - "parent_gene": "", - "protein_md5": "3133b183438b1574006ba1d1d4458b3e", - "protein_translation": "MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG", - "protein_translation_length": 244, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009061" - ], - [ - "gene_synonym", - "cysI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17846" - ], - [ - "gene_synonym", - "JW2733" - ], - [ - "gene_synonym", - "b2763" - ], - [ - "gene_synonym", - "EcoGene:EG10190" - ], - [ - "gene_synonym", - "GI:16130670" - ], - [ - "gene_synonym", - "NP_417243.1" - ], - [ - "gene_synonym", - "ECK2758" - ], - [ - "gene_synonym", - "GeneID:947231" - ] - ], - "dna_sequence": "ATGAGCGAAAAACATCCAGGGCCTTTAGTGGTCGAAGGAAAACTGACAGACGCCGAGCGCATGAAGCATGAAAGCAACTACCTGCGCGGCACCATTGCGGAAGATTTAAACGACGGTCTGACCGGCGGCTTTAAGGGCGACAACTTCCTGCTGATTCGCTTCCACGGCATGTATCAGCAGGATGACCGCGACATCCGCGCCGAACGTGCTGAACAGAAGCTGGAGCCGCGCCACGCGATGCTGCTTCGCTGTCGTCTGCCGGGTGGGGTGATTACCACTAAACAGTGGCAGGCGATCGACAAATTTGCCGGTGAAAACACCATCTATGGCAGCATTCGCCTGACCAACCGCCAGACGTTTCAGTTCCACGGCATTCTGAAAAAGAACGTCAAACCGGTGCACCAGATGCTGCACTCGGTCGGTCTTGATGCGCTGGCGACAGCTAACGACATGAACCGTAACGTACTCTGCACCTCGAACCCTTACGAGTCGCAGCTGCACGCGGAAGCGTACGAGTGGGCGAAGAAGATTTCTGAGCATCTGTTGCCTCGTACCCGCGCGTATGCGGAGATCTGGCTCGACCAGGAAAAAGTCGCCACTACTGATGAAGAACCGATCCTCGGCCAGACCTACCTGCCGCGTAAATTCAAAACCACGGTAGTGATCCCGCCACAGAACGATATCGATCTGCACGCCAACGACATGAACTTCGTGGCGATCGCCGAAAACGGCAAGCTGGTGGGCTTTAACCTGTTGGTGGGCGGTGGGCTTTCCATCGAACACGGCAACAAGAAAACCTACGCCCGCACCGCGAGTGAGTTTGGCTATCTGCCGCTGGAGCATACGCTGGCGGTGGCCGAAGCCGTCGTGACAACTCAGCGTGACTGGGGTAACCGAACCGATCGTAAAAATGCCAAAACCAAATACACGCTGGAGCGCGTGGGGGTTGAGACGTTTAAAGCGGAAGTGGAGCGTCGCGCGGGGATCAAATTTGAACCGATCCGTCCATATGAGTTCACCGGACGAGGCGATCGTATTGGCTGGGTTAAGGGCATTGATGATAACTGGCACCTGACGCTGTTTATCGAAAATGGTCGCATCCTTGATTATCCGGCGCGTCCGCTGAAAACCGGCCTGCTGGAGATCGCGAAGATCCACAAAGGCGATTTCCGCATTACGGCGAACCAGAATCTGATCATCGCCGGTGTACCGGAAAGCGAGAAAGCGAAGATCGAGAAGATCGCCAAAGAGAGCGGGTTAATGAATGCCGTCACGCCGCAGCGTGAAAACTCGATGGCTTGCGTGTCATTCCCGACTTGCCCGCTGGCGATGGCGGAAGCAGAGCGTTTCCTGCCGTCTTTTATCGACAACATCGATAATTTAATGGCGAAACATGGTGTCAGCGATGAGCATATCGTGATGCGTGTAACAGGCTGCCCGAACGGTTGTGGTCGCGCGATGCTGGCGGAAGTGGGCCTGGTGGGTAAAGCGCCGGGTCGCTACAACCTGCATCTTGGCGGCAACCGCATTGGGACACGTATCCCACGGATGTATAAAGAAAACATCACCGAGCCGGAAATCCTGGCGTCGCTTGATGAACTGATAGGGCGCTGGGCGAAAGAGCGCGAAGCGGGTGAAGGCTTCGGCGACTTTACGGTGCGTGCGGGCATCATTCGCCCGGTGCTCGATCCGGCGCGTGATTTGTGGGATTAA", - "dna_sequence_length": 1713, - "functions": [ - "sulfite reductase, beta subunit, NAD(P)-binding, heme-binding" - ], - "id": "CDS_2726", - "location": [ - [ - "NC_000913", - 2890099, - "-", - 1713 - ] - ], - "md5": "16e61d5fe1b3e758986ba26ae8c5b54a", - "parent_gene": "", - "protein_md5": "99d2bbaab9d488b2cec6d118f4f8da54", - "protein_translation": "MSEKHPGPLVVEGKLTDAERMKHESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD", - "protein_translation_length": 570, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10191" - ], - [ - "gene_synonym", - "cysJ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38038" - ], - [ - "gene_synonym", - "NP_417244.1" - ], - [ - "gene_synonym", - "GeneID:947239" - ], - [ - "gene_synonym", - "ASAP:ABE-0009063" - ], - [ - "gene_synonym", - "b2764" - ], - [ - "gene_synonym", - "GI:16130671" - ], - [ - "gene_synonym", - "JW2734" - ], - [ - "gene_synonym", - "ECK2759" - ] - ], - "dna_sequence": "ATGACGACACAGGTCCCACCTTCCGCGTTGCTTCCGTTGAACCCGGAGCAACTGGCACGCCTTCAGGCGGCCACGACCGATTTAACTCCCACCCAGCTTGCCTGGGTTTCTGGCTATTTCTGGGGCGTACTCAATCAGCAGCCTGCTGCGCTTGCAGCGACGCCAGCGCCAGCCGCAGAAATGCCGGGTATAACTATTATCTCCGCCTCGCAAACCGGCAATGCGCGCCGGGTTGCTGAAGCATTACGTGATGATTTATTAGCAGCAAAACTGAACGTTAAGCTGGTGAACGCGGGCGACTATAAATTCAAACAAATCGCCAGCGAAAAACTGCTCATCGTAGTGACGTCAACGCAAGGGGAAGGGGAACCGCCGGAAGAAGCCGTCGCGCTGCATAAGTTCCTGTTCTCCAAAAAAGCGCCAAAGCTGGAAAACACCGCGTTTGCCGTGTTTAGCCTCGGCGATAGCTCTTATGAATTTTTCTGCCAGTCCGGGAAAGATTTCGACAGCAAGCTGGCGGAACTGGGTGGTGAACGCCTGCTCGACCGTGTCGATGCCGATGTTGAATACCAGGCTGCTGCCAGCGAGTGGCGCGCCCGCGTGGTTGATGCGCTTAAATCGCGTGCGCCTGTCGCGGCACCTTCGCAATCCGTCGCTACTGGCGCGGTAAATGAAATCCACACCAGCCCGTACAGCAAAGACGCGCCGCTGGTGGCTAGCCTCTCTGTTAACCAGAAAATTACCGGGCGTAACTCTGAAAAAGACGTTCGCCATATCGAAATTGACTTAGGTGACTCGGGCATGCGTTACCAGCCGGGTGACGCGCTGGGCGTCTGGTATCAGAACGATCCGGCACTGGTGAAAGAACTTGTCGAACTGCTGTGGCTGAAAGGCGATGAACCTGTCACCGTCGAGGGCAAAACGTTGCCTCTGAACGAAGCGCTACAGTGGCACTTCGAACTGACCGTCAACACCGCCAACATTGTTGAGAATTACGCCACGCTTACCCGCAGTGAAACACTGCTGCCGCTGGTGGGCGATAAAGCGAAGTTACAGCATTACGCCGCGACGACGCCGATTGTTGACATGGTGCGTTTCTCCCCGGCACAGCTTGATGCCGAAGCGCTAATTAATCTGCTGCGCCCGCTGACGCCGCGTCTGTATTCCATCGCCTCCTCGCAGGCGGAAGTCGAGAACGAAGTACACGTCACCGTTGGTGTGGTGCGTTACGACGTGGAAGGCCGCGCCCGTGCCGGTGGTGCCTCCAGCTTCCTCGCTGACCGCGTGGAAGAAGAGGGCGAAGTCCGCGTATTTATCGAACATAACGATAACTTCCGCCTGCCAGCCAATCCAGAAACCCCGGTGATTATGATTGGCCCAGGCACCGGTATTGCGCCGTTCCGCGCCTTTATGCAGCAACGCGCCGCCGACGAAGCGCCAGGTAAAAACTGGCTGTTCTTTGGTAATCCGCACTTTACGGAAGACTTCCTGTACCAGGTGGAGTGGCAGCGCTACGTCAAAGATGGCGTGCTGACACGTATCGATCTTGCCTGGTCGCGCGATCAAAAAGAAAAAGTTTACGTACAAGACAAACTGCGCGAACAGGGCGCGGAGCTGTGGCGCTGGATCAATGATGGTGCCCACATTTATGTCTGCGGCGACGCTAATCGCATGGCGAAAGACGTTGAGCAGGCACTTCTGGAAGTGATTGCCGAATTTGGTGGCATGGACACCGAAGCGGCGGATGAATTTTTAAGTGAGCTGCGCGTAGAGCGCCGTTATCAGCGAGATGTCTACTAA", 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{ - "aliases": [ - [ - "gene_synonym", - "sscR" - ], - [ - "gene_synonym", - "NP_417245.1" - ], - [ - "gene_synonym", - "queD" - ], - [ - "gene_synonym", - "GeneID:945123" - ], - [ - "gene_synonym", - "EcoGene:EG13120" - ], - [ - "gene_synonym", - "ECK2760" - ], - [ - "gene_synonym", - "b2765" - ], - [ - "gene_synonym", - "JW2735" - ], - [ - "gene_synonym", - "ASAP:ABE-0009068" - ], - [ - "gene_synonym", - "ygcM" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P65870" - ], - [ - "gene_synonym", - "GI:16130672" - ] - ], - "dna_sequence": "ATGATGTCCACCACGTTATTTAAAGATTTCACCTTCGAAGCCGCTCACCGCTTACCACACGTCCCGGAAGGGCATAAATGTGGTCGCCTGCACGGGCATTCCTTTATGGTGCGACTGGAAATTACCGGGGAAGTCGATCCGCATACGGGCTGGATTATCGATTTCGCTGAACTAAAAGCGGCGTTTAAACCAACCTACGAGCGCCTCGATCACCATTATCTCAATGATATTCCAGGTCTGGAAAACCCAACCAGCGAGGTTTTAGCAAAATGGATTTGGGATCAGGTTAAACCCGTTGTGCCGCTGTTAAGTGCGGTGATGGTAAAAGAAACCTGCACCGCAGGTTGTATCTATCGCGGCGAATGA", - "dna_sequence_length": 366, - "functions": [ - "6-pyruvoyl tetrahydrobiopterin synthase (PTPS)" - ], - "id": "CDS_2728", - "location": [ - [ - "NC_000913", - 2892214, - "+", - 366 - ] - ], - "md5": "4b9c790c6984d2db51c59c32ff9a46d9", - "parent_gene": "", - "protein_md5": "d07a0f3b6ef069a63976276551ee69c0", - "protein_translation": "MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46904" - ], - [ - "gene_synonym", - "ECK2761" - ], - [ - "gene_synonym", - "EcoGene:EG13121" - ], - [ - "gene_synonym", - "GeneID:946114" - ], - [ - "gene_synonym", - "JW2736" - ], - [ - "gene_synonym", - "b2766" - ], - [ - "gene_synonym", - "GI:90111484" - ], - [ - "gene_synonym", - "NP_417246.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0009070" - ], - [ - "gene_synonym", - "ygcN" - ] - ], - "dna_sequence": "ATGGAAGACGACTGCGACATTATTATTATTGGTGCCGGTATTGCAGGCACCGCTTGCGCGTTACGCTGCGCGCGAGCGGGTTTATCCGTTTTGTTACTGGAACGCGCTGAAATCCCCGGCAGCAAAAATCTTTCCGGCGGGCGGTTATATACCCATGCACTCGCGGAACTCCTCCCGCAATTTCATCTGACCGCGCCTCTTGAACGACGCATCACTCACGAAAGCCTTTCCCTGTTAACGCCCGATGGCGTAACGACGTTTTCCAGCTTACAGCCCGGCGGTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAATGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGATATTCTCCGCGCCCGTTATGTGGTGCTGGCAGAAGGTGCCAACAGCGTCCTGGCTGAACGTCACGGGTTAGTGACTCGTCCTGCTGGCGAAGCGATGGCGTTGGGGATCAAAGAAGTGCTGTCGCTGGAAACATCCGCTATTGAAGAACGTTTTCATCTGGAGAATAACGAAGGCGCAGCGTTGCTGTTCAGCGGCAGGATCTGTGATGACTTACCCGGCGGCGCATTTCTTTATACTAATCAACAAACGCTCTCGTTAGGGATTGTTTGCCCGCTCTCTTCCCTTACGCAAAGTCGTGTTCCGGCAAGCGAGCTGCTGACTCGCTTTAAAGCGCATCCGGCAGTGCGCCCGCTTATCAAAAACACGGAATCACTGGAGTATGGTGCGCATCTGGTGCCAGAAGGTGGCTTGCACAGTATGCCGGTGCAATACGCCGGTAACGGCTGGCTGCTGGTGGGCGATGCGTTGCGCAGTTGCGTCAATACCGGAATTTCCGTGCGCGGCATGGATATGGCGCTGACTGGCGCGCAGGCGGCGGCACAAACGCTGATAAGCGCCTGCCAGCACCGCGAGCCGCAAAATCTGTTTCCGCTTTATCATCACAACGTAGAGCGCAGCCTGCTGTGGGATGTTCTACAGCGTTATCAGCATGTTCCGGCGCTTTTGCAACGCCCGGGATGGTACCGTACGTGGCCTGCGTTAATGCAGGATATTTCCCGCGATTTATGGGATCAGGGTGATAAACCTGTTCCACCGCTGCGCCAGTTATTCTGGCATCATTTACGTCGTCACGGCCTGTGGCATCTGGCGGGCGATGTTATCAGGAGTCTGCGATGTCTGTAG", 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- "gene_synonym", - "NP_417247.2" - ], - [ - "gene_synonym", - "JW2737" - ], - [ - "gene_synonym", - "GI:90111485" - ], - [ - "gene_synonym", - "b2767" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46905" - ], - [ - "gene_synonym", - "ygcO" - ] - ], - "dna_sequence": "ATGTCTGTAGCCCGTAATCTCTGGCGCGTTGCTGATGCGCCGCACATTGTTCCGGCTGACTCCGTTGAGCGCCAGACGGCAGAACGGTTGATTAACGCCTGTCCGGCAGGTCTTTTTTCGCTCACACCGGAAGGTAACTTACGTATTGACTATCGCAGTTGCCTGGAGTGTGGCACCTGCCGTTTGCTGTGCGACGAATCAACACTACAACAGTGGCGCTATCCGCCTTCCGGATTCGGCATCACCTACCGCTTTGGATAA", - "dna_sequence_length": 261, - "functions": [ - "putative 4Fe-4S cluster-containing protein" - ], - "id": "CDS_2730", - "location": [ - [ - "NC_000913", - 2893919, - "+", - 261 - ] - ], - "md5": "e57229b911b769dda7874c0cef3c4197", - "parent_gene": "", - "protein_md5": "6ea51bd3c5795f4ea493049cd343d6c3", - "protein_translation": "MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG", - "protein_translation_length": 86, - 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"ATGCCCCTCTTACACCTGCTCCGCCAGAATCCGGTGATTGCTGCCGTTAAAGATAATGCCAGCCTGCAACTGGCAATCGATTCTGAATGCCAATTTATTTCCGTGTTGTACGGCAATATCTGCACCATCAGTAATATCGTTAAAAAGATTAAGAACGCCGGGAAATATGCTTTTATTCATGTTGATTTGCTGGAAGGCGCGTCAAATAAAGAAGTCGTTATTCAGTTTTTGAAACTGGTGACCGAGGCGGACGGCATTATCAGTACCAAAGCCTCAATGTTGAAAGCGGCAAGAGCGGAAGGTTTTTTCTGTATTCATCGCCTGTTTATTGTTGATTCAATTTCGTTTCACAACATTGATAAGCAAGTTGCGCAATCGAATCCGGATTGTATTGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAATTACTTTGA", - "dna_sequence_length": 576, - "functions": [ - "putative antiterminator regulatory protein" - ], - "id": "CDS_2731", - "location": [ - [ - "NC_000913", - 2894196, - "+", - 576 - ] - ], - "md5": "5cb9b017caf4e82527af3c695b9d1513", - "parent_gene": "", - "protein_md5": "c317c829e12f496268bed2f3f3bfd3db", - "protein_translation": "MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL", - "protein_translation_length": 191, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygcQ" - ], - [ - "gene_synonym", - "GeneID:946413" - ], - [ - "gene_synonym", - "ASAP:ABE-0009077" - ], - [ - "gene_synonym", - "EcoGene:EG13124" - ], - [ - "gene_synonym", - "ECK2764" - ], - [ - "gene_synonym", - "NP_417249.4" - ], - [ - "gene_synonym", - "GI:90111486" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46907" - ], - [ - "gene_synonym", - "b2769" - ], - [ - "gene_synonym", - "JW5440" - ] - ], - "dna_sequence": 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2895779, - "-", - 861 - ] - ], - "md5": "44efc5d4c38fd2879f3982d097811153", - "parent_gene": "", - "protein_md5": "48a7b796df483692aa64358ff0b142bf", - "protein_translation": "MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ", - "protein_translation_length": 286, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygcR" - ], - [ - "gene_synonym", - "ASAP:ABE-0009079" - ], - [ - "gene_synonym", - "ECK2765" - ], - [ - "gene_synonym", - "EcoGene:EG13125" - ], - [ - "gene_synonym", - "GeneID:947240" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46908" - ], - [ - "gene_synonym", - "GI:90111487" - ], - [ - "gene_synonym", - "b2770" - ], - [ - "gene_synonym", - "NP_417250.4" - ], - [ - "gene_synonym", - "JW5441" - ] - ], - "dna_sequence": "ATGAACATTCTGTTAGCGTTTAAAGCCGAACCGGATGCCGGAATGCTGGCGGAAAAAGAGTGGCAGGCGGCGGCTCAGGGTAAAAGCGGACCGGATATTTCGCTACTGCGAAGTTTACTCGGTGCTGATGAACAGGCCGCTGCCGCGCTGCTGTTGGCGCAGAGAAAAAACGGTACGCCGATGTCTTTAACCGCGTTGAGCATGGGGGATGAACGGGCATTGCACTGGCTGCGCTATCTCATGGCTCTTGGGTTTGAGGAAGCTGTATTGCTGGAGACGGCGGCAGATCTGCGCTTTGCGCCGGAATTTGTCGCTCGCCATATTGCCGAATGGCAGCATCAGAATCCGCTGGATCTGATAATTACCGGCTGCCAAAGCAGCGAAGGGCAGAATGGGCAAACGCCATTTTTGCTGGCGGAAATGCTGGGCTGGCCCTGCTTCACCCAGGTGGAGCGTTTCACTCTCGACGCGCTGTTTATCACCCTCGAACAGCGTACTGAACATGGGTTGCGTTGTTGCCGGGTTCGCTTGCCTGCGGTGATTGCCGTGCGTCAGTGCGGTGAAGTGGCCTTGCCAGTACCGGGAATGCGCCAGCGAATGGCTGCGGGGAAAGCAGAAATTATCCGTAAAACTGTTGCTGCCGAAATGCCAGCGATGCAGTGTCTGCAACTGGCAAGAGCAGAGCAACGACGCGGAGCGACGCTGATTGATGGGCAAACGGTAGCAGAAAAAGCTCAAAAGCTATGGCAGGACTATTTACGCCAAAGGATGCAGCCATGA", - "dna_sequence_length": 780, - "functions": [ - "putative flavoprotein" - ], - "id": "CDS_2733", - "location": [ - [ - "NC_000913", - 2896555, - "-", - 780 - ] - ], - "md5": "11b83a4b47a0e1cb4c744f130de9ac38", - "parent_gene": "", - "protein_md5": "db6f51994b96e7d3bc259c8bbb8e6364", - "protein_translation": "MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP", - "protein_translation_length": 259, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygcS" - ], - [ - "gene_synonym", - "GeneID:947238" - ], - [ - "gene_synonym", - "EcoGene:EG13126" - ], - [ - "gene_synonym", - "ECK2766" - ], - [ - "gene_synonym", - "JW5845" - ], - [ - "gene_synonym", - "b2771" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46909" - ], - [ - "gene_synonym", - "NP_417251.2" - ], - [ - "gene_synonym", - "GI:90111488" - ], - [ - "gene_synonym", - "ASAP:ABE-0009082" - ] - ], - "dna_sequence": "ATGAACACTTCACCGGTGCGAATGGATGATTTACCGCTTAACCGTTTTCACTGCCGCATTGCTGCGCTCACTTTCGGCGCACACCTGACCGACGGTTATGTTCTCGGCGTCATTGGTTACGCCATTATTCAGCTTACGCCCGCCATGCAACTGACGCCGTTTATGGCGGGAATGATCGGCGGCTCGGCGCTCCTTGGTTTGTTCCTTGGCAGCCTGGTTCTTGGGTGGATCTCCGACCATATTGGTCGGCAAAAAATCTTCACCTTCAGCTTTTTGCTGATTACGCTTGCTTCGTTTTTACAATTTTTTGCCACCACGCCAGAGCATCTTATTGGACTGCGCATTTTGATTGGCATTGGTCTGGGAGGCGATTATTCAGTAGGTCACACCTTGCTGGCTGAATTTTCCCCGCGCCGCCATCGCGGTATTTTGCTGGGCGCATTCAGCGTGGTGTGGACCGTAGGCTATGTGCTGGCAAGTATTGCCGGACATCACTTTATTTCCGAAAACCCGGAGGCCTGGCGCTGGCTACTGGCATCGGCAGCTCTGCCCGCGTTGTTGATTACGTTATTACGCTGGGGAACGCCAGAATCACCACGCTGGCTACTGCGCCAGGGGCGTTTTGCAGAAGCTCACGCTATCGTGCATCGCTATTTTGGTCCCCATGTTTTACTGGGCGATGAAGTGGTAACGGCGACCCATAAACACATCAAAACCTTGTTCTCTTCGCGTTACTGGCGGCGCACGGCGTTTAACAGCGTCTTCTTTGTCTGCCTCGTAATCCCATGGTTTGTGATTTATACCTGGCTGCCAACTATCGCCCAGACTATTGGTCTGGAAGATGCGCTGACTGCCAGCCTGATGCTTAATGCGTTGTTAATTGTGGGCGCGCTGCTGGGATTAGTTCTGACGCACCTGCTGGCACATCGCAAATTTTTGCTGGGAAGTTTTTTGCTGCTGGCGGCAACGCTGGTAGTCATGGCCTGTTTGCCTTCCGGCAGTTCATTAACGCTGCTGCTTTTTGTTCTCTTCAGCACCACCATTTCGGCAGTCAGTAATCTGGTGGGCATTTTGCCTGCGGAAAGTTTTCCTACTGACATTCGCTCGCTGGGCGTCGGTTTTGCCACTGCCATGAGTCGACTTGGCGCGGCGGTAAGTACTGGCCTGCTGCCGTGGGTGCTGGCGCAGTGGGGAATGCAAGTCACCTTATTGCTCCTGGCGACAGTGTTGTTGGTTGGTTTTGTTGTGACCTGGCTATGGGCACCAGAAACTAAAGCCCTCCCGCTGGTGGCGGCGGGAAATGTAGGAGGTGCGAATGAACATTCTGTTAGCGTTTAA", 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"gene_synonym", - "b4463" - ], - [ - "gene_synonym", - "ygcV" - ], - [ - "gene_synonym", - "ECK2767" - ], - [ - "gene_synonym", - "GeneID:2847709" - ], - [ - "gene_synonym", - "GI:49176267" - ], - [ - "gene_synonym", - "ASAP:ABE-0174094" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46911" - ], - [ - "gene_synonym", - "YP_026183.1" - ], - [ - "gene_synonym", - "JW5442" - ] - ], - "dna_sequence": "ATGTCTTTATCTCGCGCAGCGATTGTCGACCAGCTAAAGGAAATTGTTGGTGCAGATCGCGTAATTACCGATGAAACAGTATTAAAGAAAAACAGTATTGACCGTTTTCGTAAATTTCCGGATATTCATGGCATTTATACTTTGCCGATTCCGGCAGCGGTCGTAAAACTCGGTTCCACAGAGCAAGTATCCCGTGTGCTGAATTTTATGAATGCGCACAAAATTAACGGTGTGCCGCGTACCGGTGCTTCCGCCACCGAAGGTGGGCTGGAAACTGTTGTAGAAAACTCGGTGGTGCTCGACGGCTCCGCCATGAATCAAATCATTAATATTGATATTGAGAATATGCAGGCGACGGCGCAATGTGGTGTTCCGCTGGAAGTGCTGGAAAACGCGTTGCGTGAAAAAGGTTACACCACGGGGCATTCTCCGCAGTCAAAGCCGCTGGCGCAGATGGGCGGCCTGGTAGCAACCCGAAGTATCGGGCAGTTCTCCACACTCTACGGCGCAATCGAAGATATGGTCGTTGGTCTGGAAGCAGTATTGGCTGATGGCACCGTCACACGCATTAAAAACGTGCCACGCCGCGCGGCTGGCCCGGACATTCGTCACATCATCATCGGCAACGAAGGTGCATTGTGCTATATCACTGAAGTAACAGTGAAAATCTTTAAATTCACCCCGGAAAACAACCTCTTCTACGGCTATATCCTGGAAGACATGAAAACCGGCTTCAACATCCTGCGTGAAATCATGGTGGAAGGGTATCGTCCGTCAATCGCTCGTTTGTATGACGCTGAAGATGGCACCCAACACTTCACCCATTTTGCCGACGGAAAATGCGTGCTGATCTTTATGGCTGAAGGTAACCCTCGCATTGCGAAGGTGACGGGCGAAGGGATTGCGGAAATCGTTGCCCGCTACCCGCAATGCCAGCGCGTGGACAGCAAGCTGATCGAAACCTGGTTTAACAACCTGAACTGGGGACCGGATAAAGTGGCTGCCGAACGTGTGCAGATCCTCAAAACCGGCAACATGGGCTTTACCACCGAAGTATCCGGCTGCTGGAGCTGCATCCACGAAATCTACGAAAGCGTTATTAACCGTATTCGTACTGAGTTCCCGCACGCCGACGACATCACCATGCTGGGCGGTCATTCCTCTCATAGCTATCAGAACGGCACCAACATGTACTTCGTCTACGATTACAACGTCGTTGACTGTAAGCCGGAAGAGGAAATCGACAAGTACCACAATCCGCTCAACAAGATCATCTGTGAAGAAACCATTCGCCTCGGCGGTTCGATGGTGCACCACCACGGTATCGGTAAACATCGCGTTCACTGGAGCAAACTGGAACACGGCAGCGCGTGGGCGTTGCTGGAAGGGCTGAAAAAGCAGTTCGATCCTAATGGCATTATGAATACGGGTACTATCTATCCGATTGAAAAATAA", - "dna_sequence_length": 1455, - "functions": [ - "putative FAD-linked oxidoreductase" - ], - "id": "CDS_2735", - "location": [ - [ - "NC_000913", - 2899418, - "-", - 1455 - ] - ], - "md5": "6f72021ad6c6615e7c5b08c175dc620a", - "parent_gene": "", - "protein_md5": "c29a6232dffab8a19396606b55d2b641", - "protein_translation": "MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK", - "protein_translation_length": 484, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76633" - ], - [ - "gene_synonym", - "ygcW" - ], - [ - "gene_synonym", - "ECK2768" - ], - [ - "gene_synonym", - "EcoGene:EG13130" - ], - [ - "gene_synonym", - "b2774" - ], - [ - "gene_synonym", - "NP_417254.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0009088" - ], - [ - "gene_synonym", - "GI:90111489" - ], - [ - "gene_synonym", - "GeneID:947232" - ], - [ - "gene_synonym", - "JW5443" - ] - ], - "dna_sequence": "ATGTCAATCGAATCTCTCAATGCGTTCTCAATGGATTTTTTCTCCCTGAAAGGTAAAACCGCAATTGTTACCGGTGGGAATAGCGGTTTAGGCCAGGCATTTGCCATGGCGTTGGCCAAAGCTGGCGCAAATATCTTTATTCCTAGTTTCGTCAAAGATAACGGCGAAACAAAGGAAATGATTGAAAAACAGGGTGTTGAGGTGGACTTCATGCAGGTGGGTATCACCGCAGAAGGCGCGCCGCAGAAGATTATCGCTGCTTGCTGTGAGCGTTTCGGTACAGTTGATATTCTGGTTAACAATGCCGGTATTTGTAAGCTGAATAAGGTGCTGGACTTCGGTCGTGCCGACTGGGATCCGATGATTGATGTGAACCTGACCGCCGCATTCGAGTTAAGCTATGAAGCTGCAAAAATTATGATCCCGCAGAAAAGCGGCAAAATTATTAATATCTGTTCATTGTTCTCTTACTTAGGTGGACAATGGTCACCTGCATATTCTGCCACTAAACATGCTCTTGCCGGGTTCACCAAAGCTTATTGTGATGAACTAGGTCAATATAATATTCAGGTAAATGGTATCGCCCCTGGCTATTATGCAACAGATATTACGCTGGCGACACGCAGTAATCCAGAAACCAATCAGCGCGTTCTTGATCATATTCCGGCAAACCGTTGGGGCGATACTCAGGATTTAATGGGCGCAGCCGTATTCCTCGCAAGTCCGGCATCGAATTATGTCAACGGGCATTTATTAGTGGTTGATGGCGGTTATTTAGTGCGCTAA", - "dna_sequence_length": 786, - "functions": [ - "putative SDR family oxidoreductase" - ], - "id": "CDS_2736", - "location": [ - [ - "NC_000913", - 2900273, - "-", - 786 - ] - ], - "md5": "428b902cefd193fea4b9b5592e029f3f", - "parent_gene": "", - "protein_md5": "00639736ca98e19bc6299dd565c2ae37", - "protein_translation": "MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR", - "protein_translation_length": 261, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2746" - ], - [ - "gene_synonym", - "EcoGene:EG13174" - ], - [ - "gene_synonym", - "yqcE" - ], - [ - "gene_synonym", - "ECK2769" - ], - [ - "gene_synonym", - "GeneID:947248" - ], - [ - "gene_synonym", - "b2775" - ], - [ - "gene_synonym", - "GI:16130682" - ], - [ - "gene_synonym", - "ASAP:ABE-0009095" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77031" - ], - [ - "gene_synonym", - "NP_417255.1" - ], - [ - "gene_synonym", - "yqcF" - ] - ], - "dna_sequence": "ATGCAACACAACTCATATCGCCGTTGGATAACCCTCGCGATAATTAGTTTTAGCGGCGGCGTTAGTTTCGACCTGGCTTATTTACGTTATATTTATCAAATTCCCATGGCGAAATTTATGGGATTCAGCAATACCGAGATAGGTTTAATAATGAGTACCTTTGGTATTGCGGCCATTATTCTTTATGCCCCCAGCGGCGTTATTGCCGATAAATTTTCACACCGCAAAATGATTACTTCCGCGATGATCATTACCGGATTACTGGGTCTGTTAATGGCAACGTATCCACCGCTGTGGGTAATGCTCTGTATTCAGATCGCCTTTGCGATAACGACGATTTTAATGCTGTGGTCGGTGTCGATTAAAGCTGCATCGTTGCTTGGCGATCATAGCGAGCAAGGGAAAATTATGGGCTGGATGGAAGGGCTGCGCGGCGTCGGTGTAATGTCGCTGGCGGTGTTTACCATGTGGGTCTTTTCTCGCTTTGCACCGGATGACAGCACCAGCCTGAAAACGGTCATTATCATCTATAGTGTGGTTTACATCTTGTTGGGGATTCTGTGCTGGTTTTTTGTTAGCGATAACAACAACCTGCGCAGTGCCAATAACGAAGAAAAACAGTCATTCCAGCTTAGCGACATCCTGGCCGTTTTGCGTATCAGCACCACCTGGTATTGCAGCATGGTGATTTTTGGCGTCTTCACCATCTACGCCATTCTGAGTTACTCCACCAACTATCTGACCGAAATGTATGGCATGTCGCTGGTGGCGGCGAGCTACATGGGGATTGTGATCAACAAAATATTCCGCGCGCTGTGCGGCCCACTTGGCGGCATAATCACCACCTACAGCAAAGTGAAATCCCCTACCCGCGTGATCCAAATCCTTTCCGTACTCGGCCTGCTGACGTTAACTGCCCTGCTCGTCACGAACTCTAACCCGCAATCGGTCGCGATGGGGATTGGCCTGATTTTACTGCTGGGATTCACCTGTTACGCCTCACGCGGGCTGTACTGGGCCTGCCCTGGCGAAGCGAGAACACCGTCTTACATTATGGGCACCACGGTAGGTATTTGTTCGGTGATTGGATTCCTGCCGGATGTCTTCGTTTACCCAATTATCGGCCACTGGCAAGACACCCTGCCCGCTGCAGAAGCCTACCGCAATATGTGGCTGATGGGCATGGCGGCGCTTGGCATGGTGATTGTCTTTACCTTTTTGCTGTTCCAAAAAATTCGTACTGCTGATAGCGCCCCCGCAATGGCTAGCAGCAAGTAA", - "dna_sequence_length": 1278, - "functions": [ - "putative MFS transporter, inner membrane protein" - ], - "id": "CDS_2737", - "location": [ - [ - "NC_000913", - 2900592, - "+", - 1278 - ] - ], - "md5": "a52c8b4c5ded8fb3c84cfa821742ca2c", - "parent_gene": "", - "protein_md5": "45502fef77fbb855912650593344658a", - "protein_translation": "MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK", - "protein_translation_length": 425, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417256.1" - ], - [ - "gene_synonym", - "EcoGene:EG13033" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P55138" - ], - [ - "gene_synonym", - "ECK2770" - ], - [ - "gene_synonym", - "b2776" - ], - [ - "gene_synonym", - "ygcE" - ], - [ - "gene_synonym", - "JW5444" - ], - [ - "gene_synonym", - "GI:16130683" - ], - [ - "gene_synonym", - "ASAP:ABE-0009097" - ], - [ - "gene_synonym", - "GeneID:946193" - ] - ], - "dna_sequence": "ATGTCGAAAAAATACATCATAGGGATTGATGGCGGAAGTCAGAGCACAAAAGTGGTGATGTACGATCTGGAAGGTAACGTGGTTTGCGAAGGCAAAGGCTTATTACAGCCGATGCACACGCCAGATGCCGATACTGCAGAACATCCTGACGACGATTTATGGGCATCATTATGTTTTGCCGGTCACGATTTGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTGGGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGGCACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACGCGTTACACGCCCTTACGAACACACTAACCCTGACGTGGCATATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAACCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGATGCTGCGGTAATGGATAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCTGGCACCGTCCTCGGACATATCACACCACAAGCCGCACTGGCGACACATTTCCCGGCAGGACTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAGCTCTGGGGGCCGGATTACTGGATGATGAAACGGCGGTAATTTCTCTTGGCACTTACATCGCATTGATGATGAACGGCAAAGCACTGCCGAAAGATCCAGTAGCGTACTGGCCGATTATGTCTTCTATTCCGCAAACATTGCTGTATGAAGGTTACGGTATTCGCAAAGGCATGTGGACGGTGAGCTGGCTGCGCGACATGCTAGGCGAGTCGTTAATTCAGGATGCCAGGGCGCAGGATCTTTCACCGGAAGATTTACTCAACAAAAAAGCTTCTTGTGTGCCGCCAGGCTGTAATGGTCTGATGACGGTGCTGGACTGGCTGACCAATCCGTGGGAACCGTACAAACGCGGGATTATGATCGGCTTTGATTCCAGCATGGATTACGCATGGATATATCGTTCGATACTGGAAAGCGTGGCGCTGACGCTGAAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGCATGTGATCATTACTGGCGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACGTGTTCAACCTTCCGGCACGACGTAACGCCATTAACGGTTGTGCAAGCCTGGGGGCAGCGATTAATACAGCGGTAGGTCTGGGGCTATACCCGGATTACGCAACGGCTGTCGATAACATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCAATGCCAAACGCTACGACGCGATGAATAAAGGCATTTTCAAAGACCTAACCAAACATACTGATGTGATCCTGAAAAAATCGTATGAAGTGATGCATGGGGAATTGGGGAATGTGGATTCGATCCAGAGCTGGTCGAATGCGTAA", - "dna_sequence_length": 1479, - "functions": [ - "putative kinase" - ], - "id": "CDS_2738", - "location": [ - [ - "NC_000913", - 2901896, - "+", - 1479 - ] - ], - "md5": "f77e9918eebe814643de7fb150d46912", - "parent_gene": "", - "protein_md5": "f585bfee6898d20951cb16e2bd3d11e3", - "protein_translation": "MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA", - "protein_translation_length": 492, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "queE" - ], - [ - "gene_synonym", - "GeneID:947527" - ], - [ - "gene_synonym", - "ECK2771" - ], - [ - "gene_synonym", - "JW2748" - ], - [ - "gene_synonym", - "NP_417257.1" - ], - [ - "gene_synonym", - "b2777" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64554" - ], - [ - "gene_synonym", - "ygcF" - ], - [ - "gene_synonym", - "EcoGene:EG13034" - ], - [ - "gene_synonym", - "ASAP:ABE-0009101" - ], - [ - "gene_synonym", - "GI:16130684" - ] - ], - "dna_sequence": "ATGCAGTACCCGATTAACGAGATGTTCCAGACCCTGCAAGGTGAGGGTTACTTTACCGGCGTTCCCGCCATTTTTATTCGTTTACAGGGATGCCCGGTTGGCTGTGCCTGGTGCGACACCAAACACACCTGGGAAAAGCTTGAGGATCGGGAAGTCTCCCTTTTCAGCATTCTGGCGAAGACCAAAGAGAGTGATAAGTGGGGGGCTGCGAGCAGTGAAGATTTGCTGGCTGTCATTGGTCGCCAGGGATACACCGCGCGGCATGTGGTGATTACGGGTGGTGAGCCTTGCATTCATGATTTGCTGCCACTGACTGATCTGCTCGAAAAGAACGGTTTTAGCTGCCAGATCGAAACCAGTGGTACTCATGAGGTACGCTGCACACCGAATACCTGGGTTACCGTATCGCCAAAGCTGAACATGCGCGGCGGCTATGAAGTGTTGTCACAGGCACTGGAGCGAGCCAACGAAATCAAGCATCCAGTGGGGCGCGTACGCGATATTGAAGCACTGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGA", - "dna_sequence_length": 672, - "functions": [ - "7-carboxy-7-deazaguanine synthase", - "queosine biosynthesis" - ], - "id": "CDS_2739", - "location": [ - [ - "NC_000913", - 2905418, - "-", - 672 - ] - ], - "md5": "4ab31abdc452d6f15f69ec310ace34cc", - "parent_gene": "", - "protein_md5": "be27e644b13994f36f3bfab71de706cc", - "protein_translation": "MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA", - "protein_translation_length": 223, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_002791252.1" - ], - [ - "gene_synonym", - "yqcG" - ], - [ - "gene_synonym", - "GI:226524742" - ], - [ - "gene_synonym", - "GeneID:7751618" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P612" - ], - [ - "gene_synonym", - "EcoGene:EG14487" - ], - [ - "gene_synonym", - "ECK4497" - ], - [ - "gene_synonym", - "b4682" - ] - ], - "dna_sequence": "ATGTCAGAAGAAAATAAAGAAAATGGATTTAATCATGTCAAAACATTCACCAAAATTATATTTATTTTTTCTGTATTAGTTTTTAATGATAACGAATATAAAATTACCGATGCCGCCGTCAATTTATTTATCCAGATTTAA", - "dna_sequence_length": 141, - "functions": [ - "membrane stress resistance protein" - ], - "id": "CDS_2740", - "location": [ - [ - "NC_000913", - 2905557, - "+", - 141 - ] - ], - "md5": "16be89bc2f3407ca6149c308da9245d3", - "parent_gene": "", - "protein_md5": "acce6f5638d574b76b07483d742adee4", - "protein_translation": "MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI", - "protein_translation_length": 46, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417258.4" - ], - [ - "gene_synonym", - "EcoGene:EG13035" - ], - [ - "gene_synonym", - "ASAP:ABE-0009108" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P55140" - ], - [ - "gene_synonym", - "ECK2772" - ], - [ - "gene_synonym", - "GI:90111490" - ], - [ - "gene_synonym", - "ygcG" - ], - [ - "gene_synonym", - "JW5445" - ], - [ - "gene_synonym", - "GeneID:945247" - ], - [ - "gene_synonym", - "b2778" - ] - ], - "dna_sequence": "ATGCGCTATTTCATACTAATGTTCACTTTCGTATGTTCCTTTGTTGCAGCCCAACCAACTATTGTCCCACAATTACAGCAACAAGTTACGGATCTTACGAGTAGCTTAAACTCACAAGAAAAGAAAGAACTGACGCACAAGTTAGAATCTATTTTCAATAATACCCAAGTGCAAATTGCCGTATTAATTGTTCCCACAACCAAAGACGAGACAATTGAACAATATGCTACAAGAGTTTTTGACAATTGGCGTTTAGGAGATGCCAAACGTAATGATGGGATACTGATCGTTGTTGCCTGGTCGGATCGCACTGTCCGCATCCAGGTAGGTTATGGGCTGGAAGAAAAGGTAACCGATGCTCTGGCTGGAGATATCATCCGTAGCAACATGATACCCGCATTTAAACAACAAAAATTAGCTAAGGGATTAGAGCTAGCTATAAACGCTTTGAATAACCAACTCACTTCACAACACCAATATCCGACTAATCCTTCAGAAAGTGAATCAGCGTCTTCCAGTGATCATTATTACTTTGCTATTTTTTGGGTATTTGCAGTGATGTTCTTCCCTTTCTGGTTTTTTCATCAAGGCAGTAATTTTTGTCGCGCATGTAAAAGTGGAGTCTGTATTTCAGCAATCTATCTTTTAGATTTATTCCTGTTCTCCGATAAAATTTTTTCCATTGCTGTATTTTCCTTCTTTTTTACTTTCACCATATTTATGGTCTTTACCTGTTTATGTGTACTTCAGAAAAGAGCATCTGGTAGAAGTTATCATTCAGACAACAGCGGTTCCGCTGGAGGCTCAGATAGCGGCGGATTTAGCGGCGGGGGCGGTTCTTCTGGAGGTGGCGGCGCATCCGGCCGCTGGTAA", - "dna_sequence_length": 873, - "functions": [ - "TPM domain protein, putative phosphatase" - ], - "id": "CDS_2741", - "location": [ - [ - "NC_000913", - 2905711, - "+", - 873 - ] - ], - "md5": "6c3fdef7972282854e89ea2f1f101d1c", - "parent_gene": "", - "protein_md5": "80853f16b243718772566cac3aa59cb5", - "protein_translation": "MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW", - "protein_translation_length": 290, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417259.1" - ], - [ - "gene_synonym", - "JW2750" - ], - [ - "gene_synonym", - "EcoGene:EG10258" - ], - [ - "gene_synonym", - "ECK2773" - ], - [ - "gene_synonym", - "ASAP:ABE-0009110" - ], - [ - "gene_synonym", - "GeneID:945032" - ], - [ - "gene_synonym", - "eno" - ], - [ - "gene_synonym", - "GI:16130686" - ], - [ - "gene_synonym", - "b2779" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6P9" - ] - ], - "dna_sequence": "ATGTCCAAAATCGTAAAAATCATCGGTCGTGAAATCATCGACTCCCGTGGTAACCCGACTGTTGAAGCCGAAGTACATCTGGAGGGTGGTTTCGTCGGTATGGCAGCTGCTCCGTCAGGTGCTTCTACTGGTTCCCGTGAAGCTCTGGAACTGCGCGATGGCGACAAATCCCGTTTCCTGGGTAAAGGCGTAACCAAAGCTGTTGCTGCGGTAAACGGCCCGATCGCTCAGGCGCTGATTGGCAAAGATGCTAAAGATCAGGCTGGCATTGACAAGATCATGATCGACCTGGACGGCACCGAAAACAAATCCAAATTCGGCGCGAACGCAATCCTGGCTGTATCTCTGGCTAACGCCAAAGCTGCTGCAGCTGCTAAAGGTATGCCGCTGTACGAGCACATCGCTGAACTGAACGGTACTCCGGGCAAATACTCTATGCCGGTTCCGATGATGAACATCATCAACGGTGGTGAGCACGCTGACAACAACGTTGATATCCAGGAATTCATGATTCAGCCGGTTGGCGCGAAAACTGTGAAAGAAGCCATCCGCATGGGTTCTGAAGTTTTCCATCACCTGGCAAAAGTTCTGAAAGCGAAAGGCATGAACACTGCTGTTGGTGACGAAGGTGGCTATGCGCCGAACCTGGGTTCCAACGCTGAAGCTCTGGCTGTTATCGCTGAAGCTGTTAAAGCTGCTGGTTATGAACTGGGCAAAGACATCACTTTGGCGATGGACTGCGCAGCTTCTGAATTCTACAAAGATGGTAAATACGTTCTGGCTGGCGAAGGCAACAAAGCGTTCACCTCTGAAGAATTCACTCACTTCCTGGAAGAACTGACCAAACAGTACCCGATCGTTTCTATCGAAGACGGTCTGGACGAATCTGACTGGGACGGTTTCGCATACCAGACCAAAGTTCTGGGCGACAAAATCCAGCTGGTTGGTGACGACCTGTTCGTAACCAACACCAAGATCCTGAAAGAAGGTATCGAAAAAGGTATCGCTAACTCCATCCTGATCAAATTCAACCAGATCGGTTCTCTGACCGAAACTCTGGCTGCAATCAAGATGGCGAAAGATGCTGGCTACACTGCAGTTATCTCTCACCGTTCTGGCGAAACTGAAGACGCTACCATCGCTGACCTGGCTGTTGGTACTGCTGCAGGCCAGATCAAAACTGGTTCTATGAGCCGTTCTGACCGTGTTGCTAAATACAACCAGCTGATTCGTATCGAAGAAGCTCTGGGCGAAAAAGCACCGTACAACGGTCGTAAAGAGATCAAAGGCCAGGCATAA", 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[ - "gene_synonym", - "ECK2774" - ], - [ - "gene_synonym", - "GeneID:946116" - ], - [ - "gene_synonym", - "ASAP:ABE-0009112" - ], - [ - "gene_synonym", - "pyrG" - ], - [ - "gene_synonym", - "GI:16130687" - ], - [ - "gene_synonym", - "b2780" - ] - ], - "dna_sequence": "ATGACAACGAACTATATTTTTGTGACCGGCGGGGTCGTATCCTCTCTGGGTAAAGGCATTGCCGCAGCCTCCCTCGCAGCCATTCTTGAAGCCCGTGGCCTCAATGTGACCATCATGAAACTGGATCCGTACATCAACGTCGATCCAGGTACTATGAGCCCAATCCAACACGGGGAAGTGTTCGTTACTGAAGACGGCGCTGAAACCGACCTGGACCTGGGGCACTACGAGCGTTTCATTCGTACCAAAATGAGCCGCCGCAACAACTTCACCACGGGTCGTATCTACTCTGACGTTCTGCGTAAAGAACGCCGCGGTGACTACCTCGGCGCAACCGTGCAGGTTATTCCGCACATCACTAACGCAATCAAAGAGCGCGTGCTGGAAGGTGGCGAAGGTCATGACGTAGTACTGGTAGAAATCGGCGGTACAGTAGGTGATATCGAATCCTTGCCGTTCCTCGAAGCGATTCGCCAGATGGCTGTTGAAATTGGCCGTGAGCACACTCTGTTTATGCACCTGACGCTGGTGCCGTACATGGCAGCGTCTGGTGAAGTCAAAACCAAACCGACTCAGCACTCTGTAAAAGAGCTGCTCTCCATCGGTATCCAGCCTGACATCCTGATTTGTCGTTCAGATCGCGCTGTTCCGGCGAACGAACGTGCGAAGATTGCATTGTTCTGTAATGTTCCGGAAAAAGCGGTTATTTCTCTGAAAGACGTCGATTCCATCTATAAAATTCCGGGCCTGTTGAAATCTCAGGGGCTGGACGATTATATTTGTAAACGATTCAGCTTAAACTGCCCGGAAGCGAATCTGTCCGAATGGGAACAGGTTATCTTCGAAGAAGCGAACCCGGTAAGTGAAGTCACCATCGGTATGGTCGGCAAGTACATTGAACTGCCGGATGCTTATAAATCAGTGATCGAAGCACTGAAACACGGTGGGCTGAAGAATCGTGTCAGCGTCAACATCAAACTGATCGATTCACAAGATGTTGAAACGCGCGGCGTTGAAATCCTTAAAGGTCTGGACGCAATCCTCGTACCTGGCGGTTTCGGCTATCGTGGCGTAGAAGGCATGATTACGACCGCGCGTTTTGCGCGTGAGAACAATATTCCTTATCTGGGCATTTGCCTGGGTATGCAGGTGGCGTTAATTGATTACGCTCGCCATGTTGCCAACATGGAGAACGCCAACTCTACGGAATTTGTGCCAGACTGTAAGTACCCGGTTGTGGCGCTGATTACCGAGTGGCGCGATGAAAACGGCAACGTTGAAGTTCGTAGCGAGAAGAGCGATCTCGGCGGTACCATGCGTCTCGGCGCACAGCAGTGCCAGTTGGTTGACGATAGCCTGGTTCGCCAGCTGTACAATGCGCCGACAATTGTTGAGCGTCATCGTCACCGTTACGAAGTCAACAACATGCTGTTGAAACAGATTGAAGATGCAGGTCTGCGCGTTGCGGGCCGTTCCGGGGATGATCAGTTGGTCGAGATCATCGAAGTTCCGAATCACCCGTGGTTCGTGGCTTGCCAGTTCCATCCGGAGTTTACTTCTACTCCACGTGATGGTCACCCGCTGTTTGCAGGCTTTGTGAAAGCCGCCAGCGAGTTCCAGAAACGTCAGGCGAAGTAA", - "dna_sequence_length": 1638, - "functions": [ - "CTP synthetase" - ], - "id": "CDS_2743", - "location": [ - [ - "NC_000913", - 2909666, - "-", - 1638 - ] - ], - "md5": "c86b92e495b0dcbcea8a63ac90a6fc30", - "parent_gene": "", - "protein_md5": "65fa8534717f4498012197a9bedf951b", - "protein_translation": "MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK", - "protein_translation_length": 545, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417261.1" - ], - [ - "gene_synonym", - "EcoGene:EG10572" - ], - [ - "gene_synonym", - "JW2752" - ], - [ - "gene_synonym", - "ECK2775" - ], - [ - "gene_synonym", - "GeneID:947254" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEY3" - ], - [ - "gene_synonym", - "GI:16130688" - ], - [ - "gene_synonym", - "ASAP:ABE-0009117" - ], - [ - "gene_synonym", - "mazG" - ], - [ - "gene_synonym", - "b2781" - ] - ], - "dna_sequence": "ATGAATCAAATCGACCGTTTGCTCACTATTATGCAGCGCCTGCGCGATCCGGAAAACGGCTGCCCGTGGGATAAAGAGCAGACATTTGCCACCATTGCGCCTTACACCCTTGAAGAAACCTACGAAGTGCTGGACGCCATCGCCCGTGAAGATTTTGACGATCTTCGCGGTGAACTGGGCGATCTGCTATTCCAGGTGGTGTTTTACGCGCAAATGGCTCAGGAAGAAGGGCGCTTTGACTTTAATGATATTTGCGCTGCTATTAGCGATAAATTAGAGCGTCGCCATCCGCATGTTTTTGCTGATAGTTCTGCCGAAAACAGTAGTGAAGTGCTTGCCCGTTGGGAGCAAATCAAAACCGAAGAGCGCGCGCAGAAAGCGCAGCATTCGGCGCTGGACGATATTCCTCGTAGTTTACCGGCTTTAATGCGTGCGCAAAAAATCCAGAAACGTTGCGCCAACGTTGGCTTCGATTGGACGACGCTTGGTCCGGTAGTCGATAAAGTCTACGAAGAGATCGACGAGGTGATGTACGAAGCGCGGCAGGCTGTTGTCGACCAGGCTAAACTGGAGGAGGAAATGGGGGACCTGCTGTTTGCCACGGTTAATCTGGCTCGCCATTTAGGGACGAAAGCAGAAATCGCATTGCAAAAAGCGAACGAAAAATTCGAGCGTCGTTTTCGCGAAGTGGAGCGTATTGTTGCCGCGCGTGGACTGGAAATGACAGGTGTTGACCTCGAAACAATGGAAGAAGTCTGGCAACAGGTAAAACGGCAGGAAATTGATCTCTAA", - "dna_sequence_length": 792, - "functions": [ - "nucleoside triphosphate pyrophosphohydrolase" - ], - "id": "CDS_2744", - "location": [ - [ - "NC_000913", - 2910685, - "-", - 792 - ] - ], - "md5": "8b7614de946e4229d5c1b8fc06ffd370", - "parent_gene": "", - "protein_md5": "ec01619fed400826cae674b7f50e4800", - "protein_translation": "MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL", - "protein_translation_length": 263, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "chpAK" - ], - [ - "gene_synonym", - "JW2753" - ], - [ - "gene_synonym", - "b2782" - ], - [ - "gene_synonym", - "ECK2776" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE70" - ], - [ - "gene_synonym", - "NP_417262.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009119" - ], - [ - "gene_synonym", - "GI:16130689" - ], - [ - "gene_synonym", - "mazF" - ], - [ - "gene_synonym", - "chpA" - ], - [ - "gene_synonym", - "GeneID:947252" - ], - [ - "gene_synonym", - "EcoGene:EG11249" - ] - ], - "dna_sequence": "ATGGTAAGCCGATACGTACCCGATATGGGCGATCTGATTTGGGTTGATTTTGACCCGACAAAAGGTAGCGAGCAAGCTGGACATCGTCCAGCTGTTGTCCTGAGTCCTTTCATGTACAACAACAAAACAGGTATGTGTCTGTGTGTTCCTTGTACAACGCAATCAAAAGGATATCCGTTCGAAGTTGTTTTATCCGGTCAGGAACGTGATGGCGTAGCGTTAGCTGATCAGGTAAAAAGTATCGCCTGGCGGGCAAGAGGAGCAACGAAGAAAGGAACAGTTGCCCCAGAGGAATTACAACTCATTAAAGCCAAAATTAACGTACTGATTGGGTAG", - "dna_sequence_length": 336, - "functions": [ - "mRNA interferase toxin, antitoxin is MazE" - ], - "id": "CDS_2745", - "location": [ - [ - "NC_000913", - 2911091, - "-", - 336 - ] - ], - "md5": "31641dd8fd30a2a9356d33df41376857", - "parent_gene": "", - "protein_md5": "2d2ac8345144c9aa328a5b8b633fd297", - "protein_translation": "MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG", - "protein_translation_length": 111, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2754" - ], - [ - "gene_synonym", - "chpAI" - ], - [ - "gene_synonym", - "GI:16130690" - ], - [ - "gene_synonym", - "tasA" - ], - [ - "gene_synonym", - "ASAP:ABE-0009122" - ], - [ - "gene_synonym", - "ECK2777" - ], - [ - "gene_synonym", - "GeneID:947245" - ], - [ - "gene_synonym", - "chpR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE72" - ], - [ - "gene_synonym", - "EcoGene:EG10571" - ], - [ - "gene_synonym", - "NP_417263.1" - ], - [ - "gene_synonym", - "mazE" - ], - [ - "gene_synonym", - "b2783" - ] - ], - "dna_sequence": "ATGATCCACAGTAGCGTAAAGCGTTGGGGAAATTCACCGGCGGTGCGGATCCCGGCTACGTTAATGCAGGCGCTCAATCTGAATATTGATGATGAAGTGAAGATTGACCTGGTGGATGGCAAATTAATTATTGAGCCAGTGCGTAAAGAGCCCGTATTTACGCTTGCTGAACTGGTCAACGACATCACGCCGGAAAACCTCCACGAGAATATCGACTGGGGAGAGCCGAAAGATAAGGAAGTCTGGTAA", - "dna_sequence_length": 249, - "functions": [ - "antitoxin of the ChpA-ChpR toxin-antitoxin system" - ], - "id": "CDS_2746", - "location": [ - [ - "NC_000913", - 2911339, - "-", - 249 - ] - ], - "md5": "a941eb889371d9849b0f4d65413feaeb", - "parent_gene": "", - "protein_md5": "b60b0b68dbe3564a1262cfea82549c27", - "protein_translation": "MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW", - "protein_translation_length": 82, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2755" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG20" - ], - [ - "gene_synonym", - "ECK2778" - ], - [ - "gene_synonym", - "NP_417264.1" - ], - [ - "gene_synonym", - "GeneID:947244" - ], - [ - "gene_synonym", - "ASAP:ABE-0009125" - ], - [ - "gene_synonym", - "RC" - ], - [ - "gene_synonym", - "EcoGene:EG10835" - ], - [ - "gene_synonym", - "GI:16130691" - ], - [ - "gene_synonym", - "relA" - ], - [ - "gene_synonym", - "b2784" - ] - ], - "dna_sequence": "ATGGTTGCGGTAAGAAGTGCACATATCAATAAGGCTGGTGAATTTGATCCGGAAAAATGGATCGCAAGTCTGGGTATTACCAGCCAGAAGTCGTGTGAGTGCTTAGCCGAAACCTGGGCGTATTGTCTGCAACAGACGCAGGGGCATCCGGATGCCAGTCTGTTATTGTGGCGTGGTGTTGAGATGGTGGAGATCCTCTCGACATTAAGTATGGACATTGACACGCTGCGGGCGGCGCTGCTTTTCCCTCTGGCGGATGCCAACGTAGTCAGCGAAGATGTGCTGCGTGAGAGCGTCGGTAAGTCGGTCGTTAACCTTATTCACGGCGTGCGTGATATGGCGGCGATCCGCCAGCTGAAAGCGACGCACACTGATTCTGTTTCCTCCGAACAGGTCGATAACGTTCGCCGGATGTTATTGGCGATGGTCGATGATTTTCGCTGCGTAGTCATCAAACTGGCGGAGCGTATTGCTCATCTGCGCGAAGTAAAAGATGCGCCGGAAGATGAACGTGTACTGGCGGCAAAAGAGTGTACCAACATCTACGCACCGCTGGCTAACCGTCTCGGAATCGGACAACTGAAATGGGAACTGGAAGATTACTGCTTCCGTTACCTCCATCCAACCGAATACAAACGAATTGCCAAACTGCTGCATGAACGGCGTCTCGACCGCGAACACTACATCGAAGAGTTCGTTGGTCATCTGCGCGCTGAGATGAAAGCTGAAGGCGTTAAAGCGGAAGTGTATGGTCGTCCGAAACACATCTACAGCATCTGGCGTAAAATGCAGAAAAAGAACCTCGCCTTTGATGAGCTGTTTGATGTGCGTGCGGTACGTATTGTCGCCGAGCGTTTACAGGATTGCTATGCCGCACTGGGGATAGTGCACACTCACTATCGCCACCTGCCGGATGAGTTTGACGATTACGTCGCTAACCCGAAACCAAACGGTTATCAGTCTATTCATACCGTGGTTCTGGGGCCGGGTGGAAAAACCGTTGAGATCCAAATCCGCACCAAACAGATGCATGAAGATGCAGAGTTGGGTGTTGCTGCGCACTGGAAATATAAAGAGGGCGCGGCTGCTGGCGGCGCACGTTCGGGACATGAAGACCGGATTGCCTGGCTGCGTAAACTGATTGCGTGGCAGGAAGAGATGGCTGATTCCGGCGAAATGCTCGACGAAGTACGTAGTCAGGTCTTTGACGACCGGGTGTACGTCTTTACGCCGAAAGGTGATGTCGTTGATTTGCCTGCGGGATCAACGCCGCTGGACTTCGCTTACCACATCCACAGTGATGTCGGACACCGCTGCATCGGGGCAAAAATTGGCGGGCGCATTGTGCCGTTCACCTACCAGCTGCAGATGGGCGACCAGATTGAAATTATCACCCAGAAACAGCCGAACCCCAGCCGTGACTGGTTAAACCCAAACCTCGGTTACGTCACAACCAGCCGTGGGCGTTCGAAAATTCACGCCTGGTTCCGTAAACAGGACCGTGACAAAAACATTCTGGCTGGGCGGCAAATCCTTGACGACGAGCTGGAACATCTGGGGATCAGCCTGAAAGAAGCAGAAAAACATCTGCTGCCGCGTTACAACTTCAATGATGTCGACGAGTTGCTGGCGGCGATTGGTGGCGGGGATATCCGTCTCAATCAGATGGTGAACTTCCTGCAATCGCAATTTAATAAGCCGAGTGCCGAAGAGCAGGACGCCGCCGCGCTGAAGCAACTTCAGCAAAAAAGCTACACGCCGCAAAACCGCAGTAAAGATAACGGTCGCGTGGTAGTCGAAGGTGTTGGCAACCTGATGCACCACATCGCGCGCTGCTGCCAGCCGATTCCTGGAGATGAGATTGTCGGCTTCATTACCCAGGGGCGCGGTATTTCAGTACACCGCGCCGATTGCGAACAACTGGCGGAACTGCGCTCCCATGCGCCAGAACGCATTGTTGACGCGGTATGGGGTGAGAGCTACTCCGCCGGATATTCGCTGGTGGTCCGCGTGGTAGCTAATGATCGTAGTGGGTTGTTACGTGATATCACGACCATTCTCGCCAACGAGAAGGTGAACGTGCTTGGCGTTGCCAGCCGTAGCGACACCAAACAGCAACTGGCGACCATCGACATGACCATTGAGATTTACAACCTGCAAGTGCTGGGGCGCGTGCTGGGTAAACTCAACCAGGTGCCGGATGTTATCGACGCGCGTCGGTTGCACGGGAGTTAG", - "dna_sequence_length": 2235, - "functions": [ - "(p)ppGpp synthetase I/GTP pyrophosphokinase" - ], - "id": "CDS_2747", - "location": [ - [ - "NC_000913", - 2913651, - "-", - 2235 - ] - ], - "md5": "3b59f0cfeac33990a204485abd7a5193", - "parent_gene": "", - "protein_md5": "49ff6fc65ed111112ee76be427a82132", - "protein_translation": "MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS", - "protein_translation_length": 744, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2756" - ], - [ - "gene_synonym", - "ECK2779" - ], - [ - "gene_synonym", - "GI:16130692" - ], - [ - "gene_synonym", - "rlmD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P55135" - ], - [ - "gene_synonym", - "GeneID:947243" - ], - [ - "gene_synonym", - "ASAP:ABE-0009127" - ], - [ - "gene_synonym", - "ygcA" - ], - [ - "gene_synonym", - "EcoGene:EG11247" - ], - [ - "gene_synonym", - "rumA" - ], - [ - "gene_synonym", - "NP_417265.1" - ], - [ - "gene_synonym", - "b2785" - ] - ], - "dna_sequence": "ATGGCGCAATTCTACTCTGCAAAACGACGCACGACGACGCGTCAGATCATAACCGTTTCAGTCAACGACCTCGACTCTTTTGGTCAGGGCGTGGCGCGACATAACGGCAAAACGCTATTTATCCCCGGATTATTGCCGCAGGAAAACGCGGAAGTTACTGTTACTGAAGATAAAAAACAGTATGCCCGCGCTAAAGTCGTACGCCGGTTAAGCGATAGCCCGGAACGCGAAACGCCACGCTGTCCTCATTTTGGCGTATGCGGTGGCTGTCAGCAACAACACGCCAGCGTGGATTTACAGCAGCGAAGCAAAAGTGCGGCACTCGCCCGATTAATGAAACACGATGTCTCTGAAGTGATCGCCGATGTTCCCTGGGGCTATCGCCGTCGCGCGCGTTTAAGTCTGAACTACTTACCGAAAACACAGCAACTTCAGATGGGGTTTCGCAAAGCGGGCTCCAGTGACATTGTCGACGTCAAACAATGCCCCATTTTAGCGCCCCAACTTGAAGCATTGCTGCCCAAAGTCAGGGCATGTCTGGGCAGCTTACAAGCTATGCGCCATCTTGGTCATGTTGAACTGGTACAGGCAACCAGCGGCACGCTGATGATTTTGCGCCATACCGCACCGCTAAGTTCGGCAGATCGCGAAAAACTGGAACGCTTTTCGCATTCTGAAGGCCTGGATCTGTATCTCGCCCCCGATAGTGAGATACTCGAAACCGTCTCTGGTGAGATGCCCTGGTATGACTCAAACGGGTTGCGCTTAACTTTTAGCCCGCGCGATTTTATTCAGGTCAATGCGGGTGTGAACCAAAAAATGGTAGCGCGTGCGTTGGAATGGCTGGATGTGCAACCTGAAGATCGCGTACTGGATCTGTTCTGCGGTATGGGCAACTTTACACTGCCATTGGCGACACAAGCTGCCAGTGTGGTCGGTGTAGAAGGTGTTCCGGCGCTGGTGGAAAAAGGCCAGCAGAATGCGCGTCTTAATGGCTTACAGAATGTGACGTTTTATCACGAAAATCTTGAAGAAGATGTCACAAAGCAGCCGTGGGCGAAAAACGGCTTCGATAAAGTGTTGCTGGACCCGGCGCGAGCAGGTGCCGCAGGTGTTATGCAGCAAATTATAAAACTGGAACCTATTCGTATAGTTTATGTATCCTGTAACCCTGCAACGCTGGCTCGGGATAGCGAAGCGTTATTAAAAGCAGGATATACCATTGCGCGACTGGCGATGCTGGATATGTTCCCACACACGGGACATCTGGAATCGATGGTACTTTTCTCGCGCGTTAAATAG", - "dna_sequence_length": 1302, - "functions": [ - "23S rRNA m(5)U1939 methyltransferase, SAM-dependent" - ], - "id": "CDS_2748", - "location": [ - [ - "NC_000913", - 2915000, - "-", - 1302 - ] - ], - "md5": "68762e9d538508804fba4f7a1361b850", - "parent_gene": "", - "protein_md5": "d0f438bed6ea9d58d8845b25d4471eef", - "protein_translation": "MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK", - "protein_translation_length": 433, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2757" - ], - [ - "gene_synonym", - "ECK2780" - ], - [ - "gene_synonym", - "GI:16130693" - ], - [ - "gene_synonym", - "ASAP:ABE-0009131" - ], - [ - "gene_synonym", - "GeneID:947255" - ], - [ - "gene_synonym", - "barA" - ], - [ - "gene_synonym", - "airS" - ], - [ - "gene_synonym", - "NP_417266.1" - ], - [ - "gene_synonym", - "b2786" - ], - [ - "gene_synonym", - "EcoGene:EG11367" - ], - [ - "gene_synonym", - "gacC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEC5" - ] - ], - "dna_sequence": "ATGACCAACTACAGCCTGCGCGCACGCATGATGATTCTGATCCTGGCACCGACCGTCCTTATTGGTTTATTGCTGAGTATCTTTTTCGTCGTGCATCGCTATAACGACTTGCAGCGTCAACTGGAAGATGCCGGTGCCAGCATTATTGAGCCGCTTGCAGTTTCTACTGAATATGGCATGAGCCTGCAAAATCGCGAATCTATCGGTCAGTTAATAAGCGTACTGCATCGTCGCCATTCCGATATTGTTCGCGCGATTTCGGTTTATGATGAAAATAACCGACTCTTTGTCACCTCCAATTTTCATCTTGATCCCTCATCAATGCAGCTCGGCAGCAACGTGCCGTTTCCTCGCCAGCTCACTGTCACTCGTGACGGCGATATTATGATCCTCCGCACGCCGATTATTTCTGAGAGTTACTCCCCCGACGAATCGCCCAGTAGCGATGCCAAAAATAGTCAAAATATGTTGGGATATATTGCGCTGGAGCTGGATCTTAAATCGGTTCGCTTGCAGCAATATAAAGAGATCTTTATTTCCAGCGTGATGATGCTGTTTTGTATCGGTATTGCGCTTATTTTTGGCTGGCGCTTAATGCGCGATGTAACCGGTCCGATTCGCAACATGGTGAATACCGTCGACCGCATCCGTCGCGGGCAACTCGACAGCCGGGTGGAAGGATTTATGCTCGGCGAGCTGGATATGCTGAAAAACGGTATCAACTCGATGGCAATGTCGCTGGCTGCTTATCACGAAGAGATGCAGCACAATATCGACCAGGCGACGTCCGATCTGCGTGAAACGCTGGAGCAGATGGAAATTCAGAACGTTGAGTTAGATCTGGCGAAAAAGCGCGCCCAGGAAGCGGCGCGTATTAAATCCGAGTTTCTGGCAAATATGTCACACGAGCTGCGTACACCACTGAATGGTGTTATTGGCTTTACCCGCCTGACGCTGAAAACAGAATTAACACCAACGCAGCGCGATCACCTGAATACGATTGAACGTTCGGCAAATAATTTGCTGGCAATTATTAATGATGTTCTCGACTTCTCGAAACTGGAAGCAGGTAAGCTGATTCTGGAAAGTATTCCATTCCCACTACGCAGCACGCTGGATGAAGTCGTTACTCTGCTGGCACATTCTTCTCACGATAAAGGGTTAGAACTGACGCTCAATATTAAAAGCGACGTGCCTGATAACGTGATCGGCGACCCGCTGCGATTACAGCAAATCATCACTAACCTGGTGGGGAATGCAATTAAATTCACCGAGAATGGCAACATTGATATTCTGGTAGAAAAACGTGCGCTGAGTAATACCAAAGTGCAGATTGAAGTGCAGATTCGGGATACCGGCATTGGTATTCCTGAACGCGATCAATCGCGCTTATTCCAGGCCTTCCGACAGGCTGATGCCAGTATTTCCCGCCGTCATGGTGGCACCGGGCTGGGGCTGGTGATTACACAAAAACTGGTTAATGAAATGGGCGGCGATATTTCGTTCCATAGCCAGCCGAATCGCGGTTCAACTTTCTGGTTCCACATTAATCTCGATCTGAACCCGAACATTATTATCGAAGGGCCATCCACCCAGTGCCTCGCAGGTAAGCGCCTGGCCTATGTCGAACCAAACTCCGCAGCAGCGCAATGCACGCTGGATATTTTAAGTGAAACGCCGCTGGAAGTGGTTTATAGCCCAACGTTCTCCGCGCTGCCTCCCGCGCATTACGACATGATGTTGTTAGGCATCGCGGTGACCTTCCGCGAGCCGCTAACAATGCAACATGAGCGATTAGCGAAAGCGGTATCGATGACCGATTTCCTGATGCTGGCACTTCCTTGCCATGCACAAGTCAATGCTGAAAAACTCAAGCAAGATGGTATCGGCGCGTGTCTGCTGAAACCATTAACACCTACACGCCTGTTGCCTGCCCTGACGGAATTTTGTCATCACAAACAAAACACGCTTTTGCCTGTAACCGATGAAAGTAAGCTGGCAATGACAGTCATGGCGGTTGATGACAACCCCGCTAACCTGAAACTTATCGGCGCATTGCTGGAAGATATGGTGCAACATGTGGAACTTTGCGATAGCGGGCATCAGGCGGTTGAACGGGCGAAACAGATGCCGTTCGATTTGATCTTAATGGATATTCAAATGCCGGACATGGATGGCATTCGGGCCTGCGAACTCATCCACCAACTCCCGCATCAGCAACAAACGCCGGTTATCGCGGTAACGGCGCATGCAATGGCCGGGCAAAAAGAGAAGCTGCTTGGCGCAGGGATGAGCGATTATCTGGCGAAACCGATTGAAGAAGAGCGATTGCATAATTTGTTGTTGCGCTACAAGCCTGGCAGCGGTATTTCCTCTCGCGTCGTGACGCCCGAAGTCAACGAAATTGTGGTGAACCCGAATGCGACCCTCGACTGGCAACTGGCACTACGCCAGGCAGCAGGAAAAACCGATTTAGCGCGCGATATGCTGCAAATGTTACTCGATTTCCTGCCTGAAGTTCGCAACAAAGTTGAGGAACAGCTGGTTGGAGAAAACCCGGAAGGCCTGGTTGATTTGATTCATAAACTGCATGGCAGTTGCGGCTATAGCGGTGTGCCACGTATGAAGAATCTCTGCCAACTGATCGAACAACAGCTACGTAGCGGTACTAAAGAAGAAGATTTGGAACCGGAGCTGCTGGAACTGTTGGACGAGATGGATAATGTCGCGCGCGAAGCCAGCAAAATTCTCGGGTAA", 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"MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG", - "protein_translation_length": 918, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947258" - ], - [ - "gene_synonym", - "GI:16130694" - ], - [ - "gene_synonym", - "ECK2781" - ], - [ - "gene_synonym", - "EcoGene:EG13167" - ], - [ - "gene_synonym", - "ygcX" - ], - [ - "gene_synonym", - "NP_417267.1" - ], - [ - "gene_synonym", - "gudD" - ], - [ - "gene_synonym", - "JW2758" - ], - [ - "gene_synonym", - "ASAP:ABE-0009134" - ], - [ - "gene_synonym", - "b2787" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AES2" - ] - ], - "dna_sequence": "ATGAGTTCTCAATTTACGACGCCTGTTGTTACTGAAATGCAGGTTATCCCGGTGGCGGGTCATGACAGTATGCTGATGAATCTGAGTGGTGCACACGCACCGTTCTTTACGCGTAATATTGTGATTATCAAAGATAATTCTGGTCACACTGGCGTAGGGGAAATTCCCGGCGGCGAGAAAATCCGTAAAACGCTGGAAGATGCGATTCCGCTGGTGGTAGGTAAAACGCTGGGTGAATACAAAAACGTTCTGACGCTGGTGCGTAATACTTTTGCCGATCGTGATGCTGGTGGGCGCGGTTTGCAGACATTTGACCTACGTACCACTATTCATGTAGTTACCGGGATAGAAGCGGCAATGCTGGATCTGCTGGGGCAGCATCTGGGGGTAAACGTGGCATCGCTGCTGGGCGATGGTCAACAGCGTAGCGAAGTCGAAATGCTCGGTTATCTGTTCTTCGTCGGTAATCGCAAAGCCACGCCGCTGCCGTATCAAAGCCAGCCGGATGACTCATGCGACTGGTATCGCCTGCGTCATGAAGAAGCGATGACGCCGGATGCGGTGGTGCGCCTGGCGGAAGCGGCATATGAAAAATATGGCTTCAACGATTTCAAACTGAAGGGCGGTGTACTGGCCGGGGAAGAAGAGGCCGAGTCTATTGTGGCACTGGCGCAACGCTTCCCGCAGGCGCGTATTACGCTCGATCCTAACGGTGCCTGGTCGCTGAACGAAGCGATTAAAATCGGTAAATACCTGAAAGGTTCGCTGGCTTATGCAGAAGATCCGTGTGGTGCGGAGCAAGGTTTCTCCGGGCGTGAAGTGATGGCAGAGTTCCGTCGCGCGACAGGTCTACCGACTGCAACCAATATGATCGCCACCGACTGGCGGCAAATGGGCCATACGCTCTCCCTGCAATCCGTTGATATCCCGCTGGCGGATCCGCATTTCTGGACAATGCAAGGTTCGGTACGTGTGGCGCAAATGTGCCATGAATTTGGCCTGACCTGGGGTTCACACTCTAACAACCACTTCGATATTTCCCTGGCGATGTTTACCCATGTTGCCGCCGCTGCACCGGGTAAAATTACTGCTATTGATACGCACTGGATTTGGCAGGAAGGCAATCAGCGCCTGACCAAAGAACCGTTTGAGATCAAAGGCGGGCTGGTACAGGTGCCAGAAAAACCGGGGCTGGGTGTAGAAATCGATATGGATCAAGTGATGAAAGCCCATGAGCTGTATCAGAAACACGGGCTTGGCGCGCGTGACGATGCGATGGGAATGCAGTATCTGATTCCTGGCTGGACGTTCGATAACAAGCGCCCGTGCATGGTGCGTTAA", - "dna_sequence_length": 1341, - "functions": [ - "D-glucarate dehydratase 1" - ], - "id": "CDS_2750", - "location": [ - [ - "NC_000913", - 2919385, - "-", - 1341 - ] - ], - "md5": "d438797c315c5449a4024fb4f6e903a9", - "parent_gene": "", - "protein_md5": "1a560486c877921f89e67a8d6fda2ed8", - "protein_translation": "MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATPLPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAQRFPQARITLDPNGAWSLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQVPEKPGLGVEIDMDQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR", - "protein_translation_length": 446, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130695" - ], - [ - "gene_synonym", - "GeneID:947261" - ], - [ - "gene_synonym", - "ECK2782" - ], - [ - "gene_synonym", - "ygcY" - ], - [ - "gene_synonym", - "EcoGene:EG13168" - ], - [ - "gene_synonym", - "JW2759" - ], - [ - "gene_synonym", - "ASAP:ABE-0009136" - ], - [ - "gene_synonym", - "gudX" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46915" - ], - [ - "gene_synonym", - "b2788" - ], - [ - "gene_synonym", - "NP_417268.1" - ] - ], - "dna_sequence": "ATGGCGACACAATCCAGTCCTGTTATTACTGATATGAAAGTCATTCCGGTGGCCGGGCATGACAGCATGTTGCTTAATATTGGTGGGGCACATAACGCATATTTCACCCGCAATATTGTGGTACTCACCGATAACGCCGGGCATACCGGCATTGGTGAAGCGCCGGGCGGAGATGTGATTTATCAGACGCTTGTCGATGCTATTCCGATGGTTCTGGGCCAGGAAGTTGCGCGACTGAATAAAGTGGTCCAGCAGGTGCATAAAGGTAATCAGGCCGCCGATTTTGATACCTTCGGTAAAGGTGCCTGGACCTTTGAATTACGCGTTAACGCCGTGGCGGCGCTGGAAGCCGCTTTGCTTGACCTGCTAGGTAAGGCGCTGAATGTTCCGGTCTGCGAACTGTTAGGGCCAGGCAAGCAACGCGAGGCTATTACCGTCCTCGGTTATCTGTTTTATATCGGTGATCGGACCAAAACCGATCTTCCTTATGTGGAAAATACGCCGGGCAACCATGAGTGGTATCAGTTGCGGCATCAGAAAGCAATGAACAGCGAAGCCGTTGTGCGTCTGGCGGAAGCCTCACAGGATCGCTACGGCTTTAAAGATTTCAAACTTAAGGGCGGCGTGTTACCTGGCGAGCAAGAAATCGACACTGTTCGTGCATTGAAGAAACGCTTCCCGGATGCGCGGATTACCGTTGATCCCAACGGTGCATGGCTGCTTGATGAAGCCATTTCTTTATGCAAAGGGCTGAATGATGTTCTTACCTATGCCGAAGATCCATGCGGCGCAGAACAGGGCTTCTCCGGACGTGAAGTGATGGCGGAATTTCGACGGGCGACCGGCTTGCCCGTCGCGACTAACATGATCGCCACCAACTGGCGCGAAATGGGTCATGCGGTGATGCTCAATGCGGTAGATATTCCACTTGCCGATCCGCACTTCTGGACGCTTTCCGGTGCAGTCCGTGTGGCGCAGCTTTGCGACGACTGGGGGCTGACCTGGGGCTGCCATTCTAATAACCATTTCGATATCTCTCTGGCGATGTTTACCCATGTGGGCGCGGCGGCACCGGGTAATCCTACCGCTATCGATACCCACTGGATTTGGCAGGAGGGCGATTGTCGCCTGACCCAAAATCCGCTGGAGATTAAAAACGGAAAAATTGCCGTTCCTGATGCGCCCGGTCTGGGCGTGGAACTGGACTGGGAACAGGTACAAAAGGCACATGAGGCCTATAAACGTCTGCCTGGCGGTGCGCGTAACGACGCAGGTCCGATGCAGTACCTGATCCCCGGCTGGACCTTTGACCGTAAACGTCCCGTTTTCGGCCGTCATTGA", - "dna_sequence_length": 1341, - "functions": [ - "glucarate dehydratase-related protein, substrate unknown" - ], - "id": "CDS_2751", - "location": [ - [ - "NC_000913", - 2920746, - "-", - 1341 - ] - ], - "md5": "fbb590ce0c33dd52cad670248e9d7127", - "parent_gene": "", - "protein_md5": "0904df1dbecdc5d9fd629e51d8828183", - "protein_translation": "MATQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTDNAGHTGIGEAPGGDVIYQTLVDAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFGKGAWTFELRVNAVAALEAALLDLLGKALNVPVCELLGPGKQREAITVLGYLFYIGDRTKTDLPYVENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDTVRALKKRFPDARITVDPNGAWLLDEAISLCKGLNDVLTYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLTWGCHSNNHFDISLAMFTHVGAAAPGNPTAIDTHWIWQEGDCRLTQNPLEIKNGKIAVPDAPGLGVELDWEQVQKAHEAYKRLPGGARNDAGPMQYLIPGWTFDRKRPVFGRH", - "protein_translation_length": 446, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2760" - ], - [ - "gene_synonym", - "ASAP:ABE-0009139" - ], - [ - "gene_synonym", - "GI:16130696" - ], - [ - "gene_synonym", - "ECK2783" - ], - [ - "gene_synonym", - "ygcZ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46916" - ], - [ - "gene_synonym", - "GeneID:947265" - ], - [ - "gene_synonym", - "b2789" - ], - [ - "gene_synonym", - "gudP" - ], - [ - "gene_synonym", - "NP_417269.1" - ], - [ - "gene_synonym", - "EcoGene:EG13169" - ] - ], - "dna_sequence": "ATGAGTTCTTTAAGTCAGGCTGCGAGCAGTGTGGAAAAACGCACAAATGCTCGTTACTGGATAGTGGTGATGTTGTTTATCGTCACATCCTTCAACTACGGCGACCGCGCTACGCTCTCTATCGCCGGTTCGGAAATGGCCAAAGATATCGGCCTTGATCCCGTGGGAATGGGCTATGTGTTCTCTGCTTTCTCATGGGCTTATGTTATCGGGCAGATCCCTGGTGGCTGGTTGCTGGACCGTTTTGGTTCAAAACGCGTCTACTTCTGGTCGATCTTTATCTGGTCGATGTTTACCTTGCTGCAAGGCTTCGTCGATATCTTTAGTGGATTCGGCATTATCGTTGCCCTGTTTACGCTGCGCTTCCTGGTCGGGCTTGCTGAAGCGCCATCTTTCCCCGGCAACAGTCGCATTGTTGCGGCCTGGTTTCCGGCGCAGGAAAGGGGAACGGCGGTGTCGATTTTTAACTCCGCTCAATACTTCGCAACGGTGATCTTCGCGCCGATTATGGGCTGGCTGACGCATGAAGTGGGCTGGTCACACGTCTTCTTCTTTATGGGCGGTCTGGGGATTGTCATCAGCTTTATCTGGTTGAAAGTCATCCACGAGCCAAATCAACATCCGGGGGTAAATAAGAAAGAGCTGGAGTACATCGCCGCGGGTGGTGCGCTGATCAATATGGATCAGCAAAACACCAAAGTTAAAGTGCCGTTCAGCGTGAAGTGGGGGCAGATCAAACAGCTGCTAGGGTCACGGATGATGATCGGCGTTTATATCGGTCAGTACTGTATCAACGCCCTGACTTACTTCTTTATTACCTGGTTCCCGGTTTATCTGGTGCAGGCACGCGGGATGTCGATTCTGAAAGCGGGCTTTGTGGCTTCCGTTCCGGCGGTTTGCGGTTTTATCGGCGGTGTGCTGGGTGGGATTATTTCCGACTGGCTGATGCGCCGCACGGGATCGCTGAACATTGCGCGTAAAACACCGATCGTAATGGGCATGTTGCTGTCGATGGTGATGGTGTTCTGCAACTACGTCAACGTTGAGTGGATGATCATCGGCTTTATGGCGCTGGCCTTCTTCGGTAAGGGCATCGGGGCGCTGGGTTGGGCAGTAATGGCAGATACCGCGCCAAAAGAGATCAGCGGTCTTTCCGGTGGCCTGTTCAACATGTTCGGTAACATTTCTGGCATCGTCACGCCAATCGCAATTGGTTATATCGTTGGCACGACTGGCTCGTTTAATGGGGCGCTGATTTATGTTGGTGTTCATGCCTTAATCGCGGTACTGAGCTACCTGGTGCTGGTGGGCGATATCAAGCGTATCGAGTTGAAACCTGTTGCGGGGCAATAA", - "dna_sequence_length": 1353, - "functions": [ - "putative D-glucarate transporter" - ], - "id": "CDS_2752", - "location": [ - [ - "NC_000913", - 2922100, - "-", - 1353 - ] - ], - "md5": "d0199c2728d9f84abe4e55e71fb39868", - "parent_gene": "", - "protein_md5": "5f62ce1fa85ea9d3bdc99de832c025f5", - "protein_translation": "MSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQYFATVIFAPIMGWLTHEVGWSHVFFFMGGLGIVISFIWLKVIHEPNQHPGVNKKELEYIAAGGALINMDQQNTKVKVPFSVKWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGSLNIARKTPIVMGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALIAVLSYLVLVGDIKRIELKPVAGQ", - "protein_translation_length": 450, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2784" - ], - [ - "gene_synonym", - "yqcA" - ], - [ - "gene_synonym", - "EcoGene:EG13170" - ], - [ - "gene_synonym", - "JW2761" - ], - [ - "gene_synonym", - "NP_417270.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P65367" - ], - [ - "gene_synonym", - "GI:16130697" - ], - [ - "gene_synonym", - "GeneID:947151" - ], - [ - "gene_synonym", - "ASAP:ABE-0009142" - ], - [ - "gene_synonym", - "b2790" - ] - ], - "dna_sequence": "ATGGCGGAAATTGGTATTTTTGTCGGCACCATGTACGGGAATTCACTGTTAGTGGCCGAAGAAGCGGAAGCGATTCTGACCGCGCAGGGCCACAAAGCAACGGTATTTGAAGATCCTGAATTAAGCGACTGGCTGCCCTATCAGGATAAGTATGTTCTGGTGGTTACGTCCACGACCGGGCAGGGCGACCTTCCTGATAGCATTGTGCCACTCTTTCAGGGAATCAAAGATAGTCTGGGCTTCCAGCCGAATCTGCGTTATGGCGTGATTGCGCTCGGCGACAGTAGTTATGTGAATTTCTGCAATGGCGGCAAACAGTTCGATGCCTTGTTGCAGGAACAGAGCGCTCAGCGGGTTGGCGAAATGCTGTTGATTGACGCCAGTGAGAACCCGGAACCGGAAACGGAATCAAATCCGTGGGTCGAACAGTGGGGCACGCTGTTGTCCTGA", - "dna_sequence_length": 450, - "functions": [ - "short-chain flavodoxin, FMN-binding" - ], - "id": "CDS_2753", - "location": [ - [ - "NC_000913", - 2922984, - "-", - 450 - ] - ], - "md5": "be205ccbb2ac4cd6fadac2d629def838", - "parent_gene": "", - "protein_md5": "651d9dd0277f92135bc00f3b2e33d0bb", - "protein_translation": "MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCNGGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS", - "protein_translation_length": 149, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2785" - ], - [ - "gene_synonym", - "yqcB" - ], - [ - "gene_synonym", - "JW2762" - ], - [ - "gene_synonym", - "EcoGene:EG13171" - ], - [ - "gene_synonym", - "GI:16130698" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA41" - ], - [ - "gene_synonym", - "GeneID:947242" - ], - [ - "gene_synonym", - "NP_417271.1" - ], - [ - "gene_synonym", - "truC" - ], - [ - "gene_synonym", - "b2791" - ], - [ - "gene_synonym", - "ASAP:ABE-0009147" - ] - ], - "dna_sequence": "ATGCTGGAAATACTCTATCAGGATGAATGGCTGGTTGCGGTAAATAAACCCTCCGGCTGGCTGGTTCACCGCAGCTGGCTGGATCGCGACGAGAAAGTAGTGGTCATGCAAACCGTGCGTGACCAGATAGGCCAGCATGTTTTTACTGCTCATCGTCTGGACCGACCCACTTCTGGTGTGTTGTTGATGGGATTATCCAGCGAGGCCGGACGGCTGCTGGCACAACAGTTTGAACAGCACCAAATCCAGAAACGTTACCATGCGATTGTGCGCGGCTGGTTGATGGAAGAAGCGGTGCTGGATTATCCACTGGTGGAAGAACTGGACAAAATCGCTGATAAATTTGCCCGCGAAGATAAAGGCCCGCAGCCAGCAGTGACGCATTATCGCGGTCTGGCGACCGTAGAAATGCCGGTAGCGACCGGACGTTACCCGACCACGCGCTACGGCCTGGTGGAACTGGAGCCGAAAACCGGACGCAAACATCAGCTTCGCCGACATCTTGCCCATTTGCGTCATCCGATTATTGGCGATAGCAAACATGGCGATTTACGCCAGAATCGCAGCGGTGCTGAGCATTTTGGCCTCCAGCGGTTAATGCTACATGCCAGTCAGTTGTCATTGACGCATCCTTTTACTGGCGAGCCGCTGACTATTCACGCGGGCCTGGACGACACCTGGATGCAGGCGTTATCACAATTTGGCTGGCGCGGTCTGCTTCCTGAAAATGAAAGGGTTGAGTTCAGTGCGCCATCGGGTCAGGATGGAGAGATAAGTTCCTAA", - "dna_sequence_length": 783, - "functions": [ - "tRNA(Ile1,Asp) pseudouridine(65) synthase" - ], - "id": "CDS_2754", - "location": [ - [ - "NC_000913", - 2923784, - "-", - 783 - ] - ], - "md5": "6cb5a0a64cc71eed5da18056b1840b77", - "parent_gene": "", - "protein_md5": "a8fb5626a2f442e57e7a2c011a3033c4", - "protein_translation": "MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDYPLVEELDKIADKFAREDKGPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGRKHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLTIHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS", - "protein_translation_length": 260, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yqcC" - ], - [ - "gene_synonym", - "ECK2786" - ], - [ - "gene_synonym", - "EcoGene:EG13172" - ], - [ - "gene_synonym", - "GI:16130699" - ], - [ - "gene_synonym", - "GeneID:946027" - ], - [ - "gene_synonym", - "JW2763" - ], - [ - "gene_synonym", - "NP_417272.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009152" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46919" - ], - [ - "gene_synonym", - "b2792" - ] - ], - "dna_sequence": "ATGACCACTCATGACCGCGTTCGTCTCCAGTTGCAGGCGCTTGAAGCGTTACTGCGTGAACATCAGCACTGGCGAAACGATGAACCCCAGCCGCATCAATTTAATAGTACCCAACCGTTCTTTATGGACACCATGGAACCACTGGAGTGGTTGCAGTGGGTGCTGATCCCGCGAATGCACGATTTGTTAGATAACAAACAGCCGTTACCGGGCGCTTTTGCCGTTGCACCCTATTATGAAATGGCGCTGGCGACGGACCATCCGCAACGCGCGCTTATTCTGGCTGAGCTGGAAAAACTGGATGCTCTTTTTGCGGATGATGCGAGCTAA", - "dna_sequence_length": 330, - "functions": [ - "DUF446 family protein" - ], - "id": "CDS_2755", - "location": [ - [ - "NC_000913", - 2924113, - "-", - 330 - ] - ], - "md5": "28ad6a35ebf78a5762fcf29cbeb54392", - "parent_gene": "", - "protein_md5": "7babfaf597ce601a39d3ee904173cb07", - "protein_translation": "MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2764" - ], - [ - "gene_synonym", - "NP_417273.1" - ], - [ - "gene_synonym", - "syd" - ], - [ - "gene_synonym", - "ECK2788" - ], - [ - "gene_synonym", - "GeneID:947271" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8U0" - ], - [ - "gene_synonym", - "ASAP:ABE-0009154" - ], - [ - "gene_synonym", - "GI:16130700" - ], - [ - "gene_synonym", - "ydr" - ], - [ - "gene_synonym", - "b2793" - ], - [ - "gene_synonym", - "EcoGene:EG12959" - ] - ], - "dna_sequence": "GTGGACGATTTGACCGCACAAGCCCTGAAAGATTTTACTGCACGCTACTGCGATGCGTGGCATGAAGAGCATAAAAGCTGGCCGTTAAGTGAGGAACTGTACGGTGTTCCTTCACCGTGCATTATTTCAACTACCGAAGATGCCGTATACTGGCAACCCCAGCCGTTTACCGGGGAACAAAATGTAAACGCGGTTGAACGCGCTTTTGATATTGTGATACAACCCACAATTCATACCTTTTATACGACTCAGTTTGCCGGGGATATGCACGCGCAGTTTGGCGATATCAAACTGACATTGCTGCAAACCTGGAGTGAAGACGACTTCCGTCGGGTGCAGGAAAATCTGATTGGTCATCTGGTGACTCAGAAAAGGCTAAAACTGCCGCCCACACTATTTATCGCGACGCTGGAAGAAGAGTTAGAGGTCATCTCGGTGTGTAATCTCTCCGGTGAAGTGTGCAAAGAGACGCTGGGAACACGTAAACGGACGCATTTAGCCTCAAATCTTGCGGAATTCCTTAATCAACTTAAGCCTCTTCTGTAA", - "dna_sequence_length": 546, - "functions": [ - "SecY-interacting protein" - ], - "id": "CDS_2756", - "location": [ - [ - "NC_000913", - 2925280, - "-", - 546 - ] - ], - "md5": "0979a5467964bf33ba7440194dea5101", - "parent_gene": "", - "protein_md5": "9cff58743dde3d94c2d2d8339a396a74", - "protein_translation": "MDDLTAQALKDFTARYCDAWHEEHKSWPLSEELYGVPSPCIISTTEDAVYWQPQPFTGEQNVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQTWSEDDFRRVQENLIGHLVTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGTRKRTHLASNLAEFLNQLKPLL", - "protein_translation_length": 181, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2765" - ], - [ - "gene_synonym", - "EcoGene:EG13173" - ], - [ - "gene_synonym", - "yqcD" - ], - [ - "gene_synonym", - "queF" - ], - [ - "gene_synonym", - "ECK2789" - ], - [ - "gene_synonym", - "GeneID:947270" - ], - [ - "gene_synonym", - "NP_417274.1" - ], - [ - "gene_synonym", - "b2794" - ], - [ - "gene_synonym", - "GI:16130701" - ], - [ - "gene_synonym", - "ASAP:ABE-0009162" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46920" - ] - ], - "dna_sequence": "ATGTCTTCTTATGCAAACCATCAGGCACTTGCGGGCCTGACTCTTGGAAAATCAACCGATTACCGGGATACCTATGACGCCAGCCTACTGCAAGGCGTTCCACGCAGCCTGAATCGCGACCCGCTGGGTCTGAAAGCGGATAACCTGCCTTTTCACGGTACGGATATCTGGACGCTGTATGAACTTTCCTGGCTGAATGCGAAAGGTTTGCCGCAGGTCGCTGTCGGTCATGTTGAACTTGATTACACCAGCGTAAATCTGATTGAGTCGAAGAGTTTTAAGCTCTATCTCAACAGTTTTAACCAGACGCGTTTTAATAACTGGGATGAGGTGCGCCAGACGCTGGAGCGCGACTTAAGCACTTGCGCTCAGGGTAAGATTAGCGTGGCGTTATATCGTCTTGATGAACTGGAAGGCCAGCCGATAGGTCATTTTAATGGCACTTGCATTGATGACCAGGATATCACTATCGATAACTATGAATTCACTACTGACTATCTGGAGAATGCCACCTGTGGTGAAAAAGTAGTGGAAGAGACGCTTGTCAGCCACCTGCTGAAATCAAACTGCCTGATCACCCATCAACCAGATTGGGGTTCGCTCCAAATTCAGTATCGTGGACGCCAAATTGACAGAGAAAAACTGCTGCGTTACCTGGTCTCATTCCGTCATCACAACGAGTTCCACGAACAGTGCGTGGAACGCATCTTTAATGACCTGTTACGCTTCTGCCAGCCAGAAAAATTGAGCGTTTACGCACGTTATACCCGTCGTGGCGGTCTGGACATTAACCCGTGGCGCAGTAATAGCGATTTTGTCCCATCGACCACAAGACTGGTTCGGCAATAA", - "dna_sequence_length": 849, - "functions": [ - "7-cyano-7-deazaguanine reductase (NADPH-dependent)" - ], - "id": "CDS_2757", - "location": [ - [ - "NC_000913", - 2925348, - "+", - 849 - ] - ], - "md5": "8af2118ef70de288afb963390e697b44", - "parent_gene": "", - "protein_md5": "cf65055c716179c3f78d4b45990f394a", - "protein_translation": "MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGLKADNLPFHGTDIWTLYELSWLNAKGLPQVAVGHVELDYTSVNLIESKSFKLYLNSFNQTRFNNWDEVRQTLERDLSTCAQGKISVALYRLDELEGQPIGHFNGTCIDDQDITIDNYEFTTDYLENATCGEKVVEETLVSHLLKSNCLITHQPDWGSLQIQYRGRQIDREKLLRYLVSFRHHNEFHEQCVERIFNDLLRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPSTTRLVRQ", - "protein_translation_length": 282, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2790" - ], - [ - "gene_synonym", - "JW2766" - ], - [ - "gene_synonym", - "ygdH" - ], - [ - "gene_synonym", - "ASAP:ABE-0009166" - ], - [ - "gene_synonym", - "NP_417275.1" - ], - [ - "gene_synonym", - "GeneID:947266" - ], - [ - "gene_synonym", - "b2795" - ], - [ - "gene_synonym", - "GI:16130702" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADR8" - ], - [ - "gene_synonym", - "EcoGene:EG12373" - ] - ], - "dna_sequence": "TTGATTACACATATTAGCCCGCTTGGCTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCGCGGTCCTGCGTGACATTCTCTTCGTTTACGGGCAAATCCATAACACCGTTCGTTTTCCCAACCTGAATCTCGACAACTCCGTCCACATCACTAACCTGGTCTTTTCCATCTTGCGTAACGCTCGCGCGCTGCATGTGGGTGAAGCGCCAAATATGGTGGTCTGCTGGGGCGGTCACTCAATTAACGAAAACGAGTATTTGTATGCCCGTCGCGTCGGAAACCAGCTGGGCCTGCGTGAGCTGAATATCTGCACCGGCTGTGGTCCGGGAGCGATGGAAGCGCCGATGAAAGGTGCTGCGGTCGGACACGCGCAGCAGCGTTACAAAGACAGTCGTTTTATTGGTATGACAGAGCCGTCGATTATCGCCGCTGAACCGCCTAACCCGCTGGTCAACGAATTGATCATCATGCCAGATATCGAAAAACGTCTGGAAGCGTTTGTCCGTATCGCTCACGGTATCATTATCTTCCCTGGCGGTGTGGGTACGGCAGAAGAGTTGCTCTATTTGCTGGGAATTTTAATGAACCCGGCCAACAAAGATCAGGTTTTACCATTGATCCTCACCGGCCCGAAAGAGAGCGCCGACTACTTCCGCGTACTGGACGAGTTTGTCGTGCATACGCTGGGTGAAAACGCGCGCCGCCATTACCGCATCATCATTGATGACGCCGCTGAAGTCGCTCGTCAGATGAAAAAATCGATGCCGCTGGTGAAAGAAAATCGCCGTGATACAGGCGATGCCTACAGCTTTAACTGGTCAATGCGCATTGCGCCAGATTTGCAAATGCCGTTTGAGCCGTCTCACGAGAATATGGCTAATCTGAAGCTTTACCCGGATCAACCTGTTGAAGTGCTGGCTGCCGACCTGCGCCGTGCGTTCTCCGGTATTGTGGCGGGTAACGTAAAAGAAGTCGGTATTCGCGCCATTGAAGAGTTTGGTCCTTACAAAATCAACGGCGATAAAGAGATTATGCGTCGTATGGACGACCTGCTACAGGGTTTTGTTGCCCAGCATCGTATGAAGTTGCCAGGCTCAGCCTACATCCCTTGCTACGAAATCTGCACGTAA", - "dna_sequence_length": 1365, - "functions": [ - "UPF0717 family protein" - ], - "id": "CDS_2758", - "location": [ - [ - "NC_000913", - 2926308, - "+", - 1365 - ] - ], - "md5": "5c957b4336213b547f501a12af77d554", - "parent_gene": "", - "protein_md5": "f183e4346f36c39bd348de3d83e5b7f8", - "protein_translation": "MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNSGSLTDNSKELLSRFENFDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLRDILFVYGQIHNTVRFPNLNLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSINENEYLYARRVGNQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPSIIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPANKDQVLPLILTGPKESADYFRVLDEFVVHTLGENARRHYRIIIDDAAEVARQMKKSMPLVKENRRDTGDAYSFNWSMRIAPDLQMPFEPSHENMANLKLYPDQPVEVLAADLRRAFSGIVAGNVKEVGIRAIEEFGPYKINGDKEIMRRMDDLLQGFVAQHRMKLPGSAYIPCYEICT", - "protein_translation_length": 454, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2791" - ], - [ - "gene_synonym", - "NP_417276.1" - ], - [ - "gene_synonym", - "sdaC" - ], - [ - "gene_synonym", - "JW2767" - ], - [ - "gene_synonym", - "GI:16130703" - ], - [ - "gene_synonym", - "EcoGene:EG12142" - ], - [ - "gene_synonym", - "dcrA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAD6" - ], - [ - "gene_synonym", - "b2796" - ], - [ - "gene_synonym", - "ASAP:ABE-0009169" - ], - [ - "gene_synonym", - "GeneID:947264" - ] - ], - "dna_sequence": "ATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCACGGCAATCGGCGCGGGCGTGCTGTTCCTGCCAATCAACGCCGGTGTTGGCGGTATGATCCCGCTGATCATCATGGCTATCCTTGCGTTCCCGATGACGTTTTTTGCTCACCGCGGCCTGACTCGCTTCGTACTGTCTGGTAAAAACCCGGGCGAAGACATCACCGAGGTTGTAGAAGAACACTTTGGTATTGGCGCAGGTAAACTGATTACCCTGCTCTACTTCTTCGCTATCTACCCGATCCTGCTGGTTTATAGCGTGGCAATCACCAATACCGTTGAAAGCTTCATGTCTCACCAGCTGGGTATGACGCCACCGCCGCGTGCGATTCTGTCGCTGATCCTGATCGTGGGTATGATGACCATCGTTCGCTTCGGTGAGCAGATGATCGTTAAAGCGATGAGTATTCTGGTATTCCCGTTTGTTGGCGTACTGATGCTGCTGGCTCTGTACCTGATCCCGCAGTGGAACGGCGCTGCACTGGAAACGCTGTCTCTGGACACTGCATCTGCAACCGGAAACGGTCTGTGGATGACCCTGTGGCTGGCAATTCCGGTAATGGTGTTCTCGTTCAACCACTCTCCGATCATCTCTTCTTTCGCCGTTGCGAAGCGTGAAGAGTACGGCGATATGGCAGAACAGAAATGCTCGAAGATCCTGGCATTCGCACACATCATGATGGTGCTGACCGTAATGTTCTTCGTCTTCAGCTGTGTACTGAGCCTGACTCCGGCAGACCTGGCTGCGGCTAAAGAGCAGAACATCTCGATTCTGTCTTACCTGGCTAACCACTTTAACGCACCGGTTATCGCGTGGATGGCTCCGATTATCGCGATTATCGCTATCACCAAATCCTTCCTCGGTCACTACCTGGGCGCACGTGAAGGCTTCAACGGTATGGTGATTAAATCTCTGCGTGGTAAAGGTAAGTCTATCGAAATCAACAAGCTGAACCGTATCACTGCGCTGTTCATGCTGGTAACGACCTGGATTGTTGCCACCCTGAACCCGAGCATCCTGGGTATGATTGAAACCCTGGGCGGTCCAATCATCGCGATGATCCTGTTCCTGATGCCGATGTACGCAATTCAGAAAGTACCGGCAATGCGTAAGTACAGCGGTCACATCAGCAACGTATTCGTTGTCGTGATGGGTCTGATTGCAATCTCCGCAATCTTCTACTCTCTGTTCAGCTAA", - "dna_sequence_length": 1290, - "functions": [ - "putative serine transporter" - ], - "id": "CDS_2759", - "location": [ - [ - "NC_000913", - 2928229, - "+", - 1290 - ] - ], - "md5": "a28d3fc3d61322f008c6c80c1a56e7d2", - "parent_gene": "", - "protein_md5": "a2d33d253e6e9539162415e9d2feb4b5", - "protein_translation": "METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPINAGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLITLLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQMIVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVMVFSFNHSPIISSFAVAKREEYGDMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPADLAAAKEQNISILSYLANHFNAPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIKSLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMYAIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS", - "protein_translation_length": 429, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2792" - ], - [ - "gene_synonym", - "NP_417277.1" - ], - [ - "gene_synonym", - "sdaB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30744" - ], - [ - "gene_synonym", - "JW2768" - ], - [ - "gene_synonym", - "EcoGene:EG11623" - ], - [ - "gene_synonym", - "GeneID:947262" - ], - [ - "gene_synonym", - "ASAP:ABE-0009172" - ], - [ - "gene_synonym", - "b2797" - ], - [ - "gene_synonym", - "GI:16130704" - ] - ], - "dna_sequence": "ATGATTAGCGTATTCGATATTTTCAAAATCGGCATTGGCCCTTCCAGTTCTCATACCGTTGGACCAATGAAAGCGGGTAAACAATTTACCGACGATCTGATTGCCCGTAACCTGCTTAAAGACGTGACCCGCGTGGTGGTTGACGTGTACGGCTCGCTCTCTCTGACCGGTAAAGGCCACCACACTGATATCGCCATTATTATGGGCCTGGCGGGTAACCTGCCGGATACCGTGGATATCGATTCCATCCCCAGTTTTATTCAGGATGTGAATACTCATGGTCGCCTGATGCTGGCAAACGGTCAGCATGAAGTGGAGTTCCCGGTTGATCAGTGCATGAACTTCCACGCCGACAACCTTTCTCTGCATGAAAACGGTATGCGCATTACCGCGCTGGCGGGCGATAAAGTCGTTTACAGCCAGACTTACTACTCTATTGGCGGTGGCTTTATCGTTGATGAAGAGCATTTTGGCCAGCAGGATAGCGCACCGGTTGAAGTTCCTTATCCGTACAGTTCAGCAGCCGATCTGCAAAAACATTGTCAGGAAACCGGGCTGTCACTCTCTGGCCTGATGATGAAAAACGAGCTGGCGCTGCACAGCAAAGAAGAGCTGGAACAGCACCTGGCGAACGTCTGGGAAGTCATGCGCGGCGGTATTGAGCGCGGTATTTCCACCGAAGGCGTGTTGCCTGGCAAACTGCGCGTTCCACGCCGTGCTGCGGCACTACGCCGGATGCTGGTCAGCCAGGATAAAACCACCACTGACCCGATGGCGGTTGTTGACTGGATCAACATGTTTGCACTGGCAGTGAACGAAGAGAACGCTGCTGGCGGTCGCGTGGTGACTGCGCCGACTAACGGTGCGTGCGGGATTATCCCGGCAGTTCTGGCGTACTACGACAAGTTTATCCGCGAAGTGAACGCTAACTCACTGGCTCGTTACCTGCTGGTAGCCAGCGCCATTGGTTCTCTTTATAAGATGAACGCGTCGATTTCTGGTGCTGAAGTGGGTTGCCAGGGTGAAGTTGGCGTGGCGTGCTCAATGGCGGCGGCTGGTCTGGCAGAACTATTAGGCGCAAGCCCGGCGCAGGTGTGCATCGCGGCGGAAATCGCCATGGAGCACAACCTCGGTCTGACGTGTGACCCGGTCGCCGGACAGGTACAGGTGCCATGCATCGAGCGTAACGCCATTGCGGCAGTAAAAGCGGTGAACGCCGCACGTATGGCGCTGCGCCGTACCAGCGAGCCGCGCGTCTGCCTCGATAAAGTTATCGAAACCATGTACGAAACAGGTAAAGATATGAACGCCAAGTACCGCGAAACCTCTCGCGGCGGCCTGGCAATGAAGATCGTTGCCTGCGATTAA", - "dna_sequence_length": 1368, - "functions": [ - "L-serine dehydratase 2" - ], - "id": "CDS_2760", - "location": [ - [ - "NC_000913", - 2929576, - "+", - 1368 - ] - ], - "md5": "2f2624fd467f0c1141e1bef022321648", - "parent_gene": "", - "protein_md5": "43a98c026719d6e195371b7693d4d122", - "protein_translation": "MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTRVVVDVYGSLSLTGKGHHTDIAIIMGLAGNLPDTVDIDSIPSFIQDVNTHGRLMLANGQHEVEFPVDQCMNFHADNLSLHENGMRITALAGDKVVYSQTYYSIGGGFIVDEEHFGQQDSAPVEVPYPYSSAADLQKHCQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRGGIERGISTEGVLPGKLRVPRRAAALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENAAGGRVVTAPTNGACGIIPAVLAYYDKFIREVNANSLARYLLVASAIGSLYKMNASISGAEVGCQGEVGVACSMAAAGLAELLGASPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPCIERNAIAAVKAVNAARMALRRTSEPRVCLDKVIETMYETGKDMNAKYRETSRGGLAMKIVACD", - "protein_translation_length": 455, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2793" - ], - [ - "gene_synonym", - "ygdG" - ], - [ - "gene_synonym", - "NP_417278.4" - ], - [ - "gene_synonym", - "exo" - ], - [ - "gene_synonym", - "GI:226524743" - ], - [ - "gene_synonym", - "GeneID:947256" - ], - [ - "gene_synonym", - "EcoGene:EG12372" - ], - [ - "gene_synonym", - "ASAP:ABE-0009174" - ], - [ - "gene_synonym", - "b2798" - ], - [ - "gene_synonym", - "xni" - ], - [ - "gene_synonym", - "JW5446" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38506" - ] - ], - "dna_sequence": "GTGGCTGTTCATTTGCTTATTGTCGATGCACTGAATCTTATTCGTCGCATTCATGCCGTTCAGGGGTCGCCCTGTGTCGAAACCTGCCAGCATGCGCTCGATCAGCTCATTATGCACAGCCAGCCAACCCACGCGGTCGCCGTTTTTGATGATGAAAACCGCAGTAGCGGCTGGCGTCATCAGCGTTTACCAGATTACAAAGCGGGTCGACCGCCAATGCCGGAAGAGTTGCACGACGAGATGCCTGCATTACGCGCCGCCTTTGAGCAACGCGGCGTCCCGTGCTGGTCAACCAGCGGCAACGAAGCCGATGACTTAGCCGCCACGCTGGCGGTCAAAGTGACACAGGCCGGGCATCAGGCAACGATTGTTTCGACAGATAAAGGCTACTGTCAGTTACTTTCACCGACATTACGTATTCGTGATTACTTCCAGAAACGTTGGCTGGATGCGCCATTTATCGATAAAGAATTTGGCGTTCAACCGCAGCAGTTGCCCGATTACTGGGGACTTGCGGGGATCAGCAGTTCAAAGGTACCGGGTGTTGCGGGAATCGGACCAAAAAGCGCCACGCAGCTGCTGGTCGAGTTTCAGAGTCTGGAAGGGATATATGAGAATCTGGATGCGGTTGCCGAAAAGTGGCGCAAAAAATTAGAAACCCATAAAGAGATGGCGTTTCTGTGCCGCGATATTGCCCGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAA", - "dna_sequence_length": 756, - "functions": [ - "Ssb-binding protein, misidentified as ExoIX" - ], - "id": "CDS_2761", - "location": [ - [ - "NC_000913", - 2931055, - "+", - 756 - ] - ], - "md5": "860d8d6f709a8fc397a0b82581073ad8", - "parent_gene": "", - "protein_md5": "3f479355229956f0652aaf852d1f780d", - "protein_translation": "MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPPMPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLVR", - "protein_translation_length": 251, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9S1" - ], - [ - "gene_synonym", - "ECK2794" - ], - [ - "gene_synonym", - "fucO" - ], - [ - "gene_synonym", - "NP_417279.2" - ], - [ - "gene_synonym", - "JW2770" - ], - [ - "gene_synonym", - "ASAP:ABE-0009177" - ], - [ - "gene_synonym", - "GeneID:947273" - ], - [ - "gene_synonym", - "b2799" - ], - [ - "gene_synonym", - "GI:345452723" - ], - [ - "gene_synonym", - "EcoGene:EG10351" - ] - ], - "dna_sequence": "ATGGCTAACAGAATGATTCTGAACGAAACGGCATGGTTTGGTCGGGGTGCTGTTGGGGCTTTAACCGATGAGGTGAAACGCCGTGGTTATCAGAAGGCGCTGATCGTCACCGATAAAACGCTGGTGCAATGCGGCGTGGTGGCGAAAGTGACCGATAAGATGGATGCTGCAGGGCTGGCATGGGCGATTTACGACGGCGTAGTGCCCAACCCAACAATTACTGTCGTCAAAGAAGGGCTCGGTGTATTCCAGAATAGCGGCGCGGATTACCTGATCGCTATTGGTGGTGGTTCTCCACAGGATACTTGTAAAGCGATTGGCATTATCAGCAACAACCCGGAGTTTGCCGATGTGCGTAGCCTGGAAGGGCTTTCCCCGACCAATAAACCCAGTGTACCGATTCTGGCAATTCCTACCACAGCAGGTACTGCGGCAGAAGTGACCATTAACTACGTGATCACTGACGAAGAGAAACGGCGCAAGTTTGTTTGCGTTGATCCGCATGATATCCCGCAGGTGGCGTTTATTGACGCTGACATGATGGATGGTATGCCTCCAGCGCTGAAAGCTGCGACGGGTGTCGATGCGCTCACTCATGCTATTGAGGGGTATATTACCCGTGGCGCGTGGGCGCTAACCGATGCACTGCACATTAAAGCGATTGAAATCATTGCTGGGGCGCTGCGAGGATCGGTTGCTGGTGATAAGGATGCCGGAGAAGAAATGGCGCTCGGGCAGTATGTTGCGGGTATGGGCTTCTCGAATGTTGGGTTAGGGTTGGTGCATGGTATGGCGCATCCACTGGGCGCGTTTTATAACACTCCACACGGTGTTGCGAACGCCATCCTGTTACCGCATGTCATGCGTTATAACGCTGACTTTACCGGTGAGAAGTACCGCGATATCGCGCGCGTTATGGGCGTGAAAGTGGAAGGTATGAGCCTGGAAGAGGCGCGTAATGCCGCTGTTGAAGCGGTGTTTGCTCTCAACCGTGATGTCGGTATTCCGCCACATTTGCGTGATGTTGGTGTACGCAAGGAAGACATTCCGGCACTGGCGCAGGCGGCACTGGATGATGTTTGTACCGGTGGCAACCCGCGTGAAGCAACGCTTGAGGATATTGTAGAGCTTTACCATACCGCCTGGTAA", - "dna_sequence_length": 1149, - "functions": [ - "L-1,2-propanediol oxidoreductase" - ], - "id": "CDS_2762", - "location": [ - [ - "NC_000913", - 2933013, - "-", - 1149 - ] - ], - "md5": "c0a89588cc3574ad5392411bc128ee38", - "parent_gene": "", - "protein_md5": "a7952e210195e398156a0d5896aa0437", - "protein_translation": "MANRMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVAGDKDAGEEMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTGEKYRDIARVMGVKVEGMSLEEARNAAVEAVFALNRDVGIPPHLRDVGVRKEDIPALAQAALDDVCTGGNPREATLEDIVELYHTAW", - "protein_translation_length": 382, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "prd" - ], - [ - "gene_synonym", - "fucC" - ], - [ - "gene_synonym", - "b2800" - ], - [ - "gene_synonym", - "ECK2795" - ], - [ - "gene_synonym", - "fucA" - ], - [ - "gene_synonym", - "JW2771" - ], - [ - "gene_synonym", - "NP_417280.1" - ], - [ - "gene_synonym", - "GeneID:947282" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB87" - ], - [ - "gene_synonym", - "EcoGene:EG10348" - ], - [ - "gene_synonym", - "GI:16130707" - ], - [ - "gene_synonym", - "ASAP:ABE-0009179" - ] - ], - "dna_sequence": "ATGGAACGAAATAAACTTGCTCGTCAGATTATTGACACTTGCCTGGAAATGACCCGCCTGGGACTGAACCAGGGGACAGCGGGGAACGTCAGTGTACGTTATCAGGATGGGATGCTGATTACGCCTACAGGCATTCCATATGAAAAACTGACGGAGTCGCATATTGTCTTTATTGATGGCAACGGTAAACATGAGGAAGGAAAGCTCCCCTCAAGCGAATGGCGTTTCCATATGGCAGCCTATCAAAGCAGACCGGATGCCAACGCGGTTGTTCACAATCATGCCGTTCATTGCACGGCAGTTTCCATTCTTAACCGATCGATCCCCGCTATTCACTACATGATTGCGGCGGCTGGCGGTAATTCTATTCCTTGCGCGCCTTATGCGACCTTTGGAACACGCGAACTTTCTGAACATGTTGCGCTGGCTCTCAAAAATCGTAAGGCAACTTTGTTACAACATCATGGGCTTATCGCTTGTGAGGTGAATCTGGAAAAAGCGTTATGGCTGGCGCATGAAGTTGAAGTGCTGGCGCAACTTTACCTGACGACCCTGGCGATTACGGACCCGGTGCCAGTGCTGAGCGATGAAGAGATTGCCGTAGTGCTGGAGAAATTCAAAACCTATGGGTTACGAATTGAAGAGTAA", - "dna_sequence_length": 648, - "functions": [ - "L-fuculose-1-phosphate aldolase" - ], - "id": "CDS_2763", - "location": [ - [ - "NC_000913", - 2933688, - "-", - 648 - ] - ], - "md5": "7dc22f68a2983c06168cc00503049319", - "parent_gene": "", - "protein_md5": "3dbf2e28e039acdb27aba57a7e14a764", - "protein_translation": "MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTGIPYEKLTESHIVFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRSIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE", - "protein_translation_length": 215, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2801" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11551" - ], - [ - "gene_synonym", - "NP_417281.1" - ], - [ - "gene_synonym", - "ECK2796" - ], - [ - "gene_synonym", - "JW2772" - ], - [ - "gene_synonym", - "ASAP:ABE-0009187" - ], - [ - "gene_synonym", - "GeneID:947487" - ], - [ - "gene_synonym", - "GI:16130708" - ], - [ - "gene_synonym", - "fucP" - ], - [ - "gene_synonym", - "EcoGene:EG10352" - ] - ], - "dna_sequence": "ATGGGAAACACATCAATACAAACGCAGAGTTACCGTGCGGTAGATAAAGATGCAGGGCAAAGCAGAAGTTACATTATTCCATTCGCGCTGCTGTGCTCACTGTTTTTTCTTTGGGCGGTAGCCAATAACCTTAACGACATTTTATTACCTCAATTCCAGCAGGCTTTTACGCTGACAAATTTCCAGGCTGGCCTGATCCAATCGGCCTTTTACTTTGGTTATTTCATTATCCCAATCCCTGCTGGGATATTGATGAAAAAACTCAGTTATAAAGCAGGGATTATTACCGGGTTATTTTTATATGCCTTGGGTGCTGCATTATTCTGGCCCGCCGCAGAAATAATGAACTACACCTTGTTTTTAGTTGGCCTATTTATTATTGCAGCCGGATTAGGTTGTCTGGAAACTGCCGCAAACCCTTTTGTTACGGTATTAGGGCCGGAAAGTAGTGGTCACTTCCGCTTAAATCTTGCGCAAACATTTAACTCGTTTGGCGCAATTATCGCGGTTGTCTTTGGGCAAAGTCTTATTTTGTCTAACGTGCCACATCAATCGCAAGACGTTCTCGATAAAATGTCTCCAGAGCAATTGAGTGCGTATAAACACAGCCTGGTATTATCGGTACAGACACCTTATATGATCATCGTGGCTATCGTGTTACTGGTCGCCCTGCTGATCATGCTGACGAAATTCCCGGCATTGCAGAGTGATAATCACAGTGACGCCAAACAAGGATCGTTCTCCGCATCGCTTTCTCGCCTGGCGCGTATTCGCCACTGGCGCTGGGCGGTATTAGCGCAATTCTGCTATGTCGGCGCACAAACGGCCTGCTGGAGCTATTTGATTCGCTACGCTGTAGAAGAAATTCCAGGTATGACTGCAGGCTTTGCCGCTAACTATTTAACCGGAACCATGGTGTGCTTCTTTATTGGTCGTTTCACCGGTACCTGGCTCATCAGTCGCTTCGCACCACACAAAGTCCTGGCCGCCTACGCATTAATCGCTATGGCACTGTGCCTGATCTCAGCCTTCGCTGGCGGTCATGTGGGCTTAATAGCCCTGACTTTATGCAGCGCCTTTATGTCGATTCAGTACCCAACAATCTTCTCGCTGGGCATTAAGAATCTCGGCCAGGACACCAAATATGGTTCGTCCTTCATCGTTATGACCATTATTGGCGGCGGTATTGTCACTCCGGTCATGGGTTTTGTCAGTGACGCGGCGGGCAACATCCCCACTGCTGAACTGATCCCCGCACTCTGCTTCGCGGTCATCTTTATCTTTGCCCGTTTCCGTTCTCAAACGGCAACTAACTGA", - "dna_sequence_length": 1317, - "functions": [ - "L-fucose transporter" - ], - "id": "CDS_2764", - "location": [ - [ - "NC_000913", - 2934235, - "+", - 1317 - ] - ], - "md5": "dc8df13d0c7d12ae06040d788b3f4e4f", - "parent_gene": "", - "protein_md5": "0530c5e9c40db1a656c982bb16deb794", - "protein_translation": "MGNTSIQTQSYRAVDKDAGQSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFARFRSQTATN", - "protein_translation_length": 438, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2802" - ], - [ - "gene_synonym", - "ECK2797" - ], - [ - "gene_synonym", - "JW2773" - ], - [ - "gene_synonym", - "fucI" - ], - [ - "gene_synonym", - "GI:16130709" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69922" - ], - [ - "gene_synonym", - "EcoGene:EG10349" - ], - [ - "gene_synonym", - "GeneID:946195" - ], - [ - "gene_synonym", - "NP_417282.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009189" - ] - ], - "dna_sequence": "ATGAAAAAAATCAGCTTACCGAAAATTGGTATCCGCCCGGTTATTGACGGTCGTCGCATGGGTGTTCGTGAGTCGCTTGAAGAACAAACAATGAATATGGCGAAAGCTACGGCCGCACTGCTGACCGAGAAACTGCGCCATGCCTGCGGAGCTGCCGTCGAGTGTGTCATTTCCGATACCTGTATCGCGGGTATGGCTGAAGCCGCTGCTTGCGAAGAAAAATTCAGCAGTCAGAATGTAGGCCTCACCATTACGGTAACGCCTTGCTGGTGCTATGGCAGTGAAACCATCGACATGGATCCAACCCGCCCGAAGGCCATTTGGGGCTTTAACGGCACTGAACGCCCCGGCGCTGTTTACCTGGCAGCGGCTCTGGCAGCTCACAGCCAGAAAGGCATCCCAGCATTCTCCATTTACGGTCATGACGTTCAGGATGCCGATGACACATCGATTCCTGCCGATGTTGAAGAAAAACTGCTGCGCTTTGCCCGCGCCGGTTTGGCCGTCGCCAGCATGAAAGGTAAAAGCTATCTGTCGCTGGGCGGCGTTTCGATGGGTATCGCCGGTTCCATTGTTGATCACAACTTCTTTGAATCCTGGCTGGGAATGAAAGTCCAGGCGGTGGATATGACCGAACTGCGTCGCCGTATCGATCAGAAGATTTACGACGAAGCCGAATTGGAAATGGCACTGGCCTGGGCTGATAAAAACTTCCGCTATGGCGAAGATGAAAATAACAAACAGTATCAACGTAATGCCGAGCAAAGCCGCGCAGTTCTGCGCGAAAGTTTACTGATGGCGATGTGTATCCGCGACATGATGCAAGGCAACAGCAAACTGGCCGATATTGGTCGCGTGGAAGAATCACTTGGCTACAACGCCATCGCTGCGGGCTTCCAGGGGCAACGTCACTGGACCGATCAATATCCCAATGGTGACACCGCCGAAGCGATCCTCAACAGTTCATTTGACTGGAATGGCGTGCGCGAACCCTTTGTCGTGGCGACCGAAAACGACAGTCTTAACGGCGTGGCAATGCTAATGGGTCACCAGCTCACCGGCACCGCTCAGGTATTTGCCGATGTGCGTACCTACTGGTCACCAGAAGCAATTGAGCGTGTAACGGGGCATAAACTGGATGGACTGGCAGAACACGGCATCATCCATTTGATCAACTCCGGTTCTGCTGCGCTGGACGGTTCCTGTAAACAACGCGACAGCGAAGGTAACCCGACGATGAAGCCACACTGGGAAATCTCTCAGCAAGAGGCTGACGCTTGCCTCGCCGCTACCGAATGGTGCCCGGCGATCCACGAATACTTCCGTGGCGGCGGTTACTCTTCCCGCTTCCTTACCGAAGGCGGCGTCCCGTTCACCATGACTCGTGTCAACATCATCAAAGGCCTGGGACCGGTACTGCAAATCGCGGAAGGCTGGAGCGTGGAATTGCCGAAGGATGTGCATGACATCCTCAACAAACGCACCAACTCAACCTGGCCAACCACCTGGTTTGCACCGCGCCTCACCGGTAAAGGGCCGTTTACGGATGTGTACTCGGTAATGGCGAACTGGGGCGCTAACCATGGGGTTCTGACCATCGGCCACGTTGGCGCAGACTTTATCACTCTCGCCTCCATGCTGCGTATCCCGGTATGTATGCACAACGTTGAAGAGACCAAAGTGTATCGTCCTTCTGCCTGGGCTGCGCACGGCATGGATATTGAAGGCCAGGATTACCGCGCTTGCCAGAACTACGGTCCGTTGTACAAGCGTTAA", - "dna_sequence_length": 1776, - "functions": [ - "L-fucose isomerase" - ], - "id": "CDS_2765", - "location": [ - [ - "NC_000913", - 2935584, - "+", - 1776 - ] - ], - "md5": "b23e5f6a2ca90c748fa6e77a3c472396", - "parent_gene": "", - "protein_md5": "8be48c0b4f5abcc4f987fbefabcff969", - "protein_translation": "MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEKLRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPTRPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLLRFARAGLAVASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRIDQKIYDEAELEMALAWADKNFRYGEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQGNSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILNSSFDWNGVREPFVVATENDSLNGVAMLMGHQLTGTAQVFADVRTYWSPEAIERVTGHKLDGLAEHGIIHLINSGSAALDGSCKQRDSEGNPTMKPHWEISQQEADACLAATEWCPAIHEYFRGGGYSSRFLTEGGVPFTMTRVNIIKGLGPVLQIAEGWSVELPKDVHDILNKRTNSTWPTTWFAPRLTGKGPFTDVYSVMANWGANHGVLTIGHVGADFITLASMLRIPVCMHNVEETKVYRPSAWAAHGMDIEGQDYRACQNYGPLYKR", - "protein_translation_length": 591, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2803" - ], - [ - "gene_synonym", - "GI:674842733" - ], - [ - "gene_synonym", - "JW2774" - ], - [ - "gene_synonym", - "fucK" - ], - [ - "gene_synonym", - "GeneID:946022" - ], - [ - "gene_synonym", - "NP_417283.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0009191" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11553" - ], - [ - "gene_synonym", - "EcoGene:EG10350" - ], - [ - "gene_synonym", - "ECK2798" - ] - ], - "dna_sequence": "ATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCAGGGCCATCGCGGTTAATCGGCAGGGCAAAATTGTTGCCCGCGCCTCAACGCCTAATGCCAGCGATATCGCGATGGAAAACAACACCTGGCACCAGTGGTCTTTAGACGCCATTTTGCAACGCTTTGCTGATTGCTGTCGGCAAATCAATAGTGAACTGACTGAATGCCACATCCGCGGTATCGCCGTCACCACCTTTGGTGTGGATGGCGCTCTGGTAGATAAGCAAGGCAATCTGCTCTATCCGATTATTAGCTGGAAATGTCCGCGAACAGCAGCGGTTATGGACAATATTGAACGGTTAATCTCCGCACAGCGGTTGCAGGCTATTTCTGGCGTCGGAGCCTTTAGTTTCAATACGTTATATAAGTTGGTGTGGTTGAAAGAAAATCATCCACAACTGCTGGAACGCGCGCACGCCTGGCTCTTTATTTCGTCGCTGATTAACCACCGTTTAACCGGCGAATTCACTACTGATATCACGATGGCCGGAACCAGCCAGATGCTGGATATCCAGCAACGCGATTTCAGTCCGCAAATTTTACAAGCCACCGGTATTCCACGCCGACTCTTCCCTCGTCTGGTGGAAGCGGGTGAACAGATTGGTACGCTACAGAACAGCGCCGCAGCAATGCTCGGCTTACCCGTTGGCATACCGGTGATTTCCGCAGGTCACGATACCCAGTTCGCCCTTTTTGGCGCTGGTGCTGAACAAAATGAACCCGTGCTCTCTTCCGGTACATGGGAAATTTTAATGGTTCGCAGCGCCCAGGTTGATACTTCGCTGTTAAGTCAGTACGCCGGTTCCACCTGCGAACTGGATAGCCAGGCAGGGTTGTATAACCCAGGTATGCAATGGCTGGCATCCGGCGTGCTGGAATGGGTGAGAAAACTGTTCTGGACGGCTGAAACACCCTGGCAAATGTTGATTGAAGAAGCTCGTCTGATCGCGCCTGGCGCGGATGGCGTAAAAATGCAGTGTGATTTATTGTCGTGTCAGAACGCTGGCTGGCAAGGAGTGACGCTTAATACCACGCGGGGGCATTTCTATCGCGCGGCGCTGGAAGGGTTAACTGCGCAATTACAGCGCAATCTACAGATGCTGGAAAAAATCGGGCACTTTAAGGCCTCTGAATTATTGTTAGTCGGTGGAGGAAGTCGCAACACATTGTGGAATCAGATTAAAGCCAATATGCTTGATATTCCGGTAAAAGTTCTCGACGACGCCGAAACGACCGTCGCAGGAGCTGCGCTGTTCGGTTGGTATGGCGTAGGGGAATTTAACAGCCCGGAAGAAGCCCGCGCACAGATTCATTATCAGTACCGTTATTTCTACCCGCAAACTGAACCTGAATTTATAGAGGAAGTGTGA", - "dna_sequence_length": 1419, - "functions": [ - "L-fuculokinase" - ], - "id": "CDS_2766", - "location": [ - [ - "NC_000913", - 2937468, - "+", - 1419 - ] - ], - "md5": "e7f7ae5a69e778cbecde98b8d57c8d90", - "parent_gene": "", - "protein_md5": "c90262ca07247f04717e05ada7f0b306", - "protein_translation": "MKQEVILVLDCGATNVRAIAVNRQGKIVARASTPNASDIAMENNTWHQWSLDAILQRFADCCRQINSELTECHIRGIAVTTFGVDGALVDKQGNLLYPIISWKCPRTAAVMDNIERLISAQRLQAISGVGAFSFNTLYKLVWLKENHPQLLERAHAWLFISSLINHRLTGEFTTDITMAGTSQMLDIQQRDFSPQILQATGIPRRLFPRLVEAGEQIGTLQNSAAAMLGLPVGIPVISAGHDTQFALFGAGAEQNEPVLSSGTWEILMVRSAQVDTSLLSQYAGSTCELDSQAGLYNPGMQWLASGVLEWVRKLFWTAETPWQMLIEEARLIAPGADGVKMQCDLLSCQNAGWQGVTLNTTRGHFYRAALEGLTAQLQRNLQMLEKIGHFKASELLLVGGGSRNTLWNQIKANMLDIPVKVLDDAETTVAGAALFGWYGVGEFNSPEEARAQIHYQYRYFYPQTEPEFIEEV", - "protein_translation_length": 472, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417284.1" - ], - [ - "gene_synonym", - "b2804" - ], - [ - "gene_synonym", - "GeneID:945842" - ], - [ - "gene_synonym", - "JW2775" - ], - [ - "gene_synonym", - "ECK2799" - ], - [ - "gene_synonym", - "fucU" - ], - [ - "gene_synonym", - "EcoGene:EG10355" - ], - [ - "gene_synonym", - "GI:16130711" - ], - [ - "gene_synonym", - "ASAP:ABE-0009193" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEN8" - ] - ], - "dna_sequence": "ATGCTGAAAACAATTTCGCCGTTAATTTCTCCCGAACTATTGAAAGTGCTGGCAGAGATGGGACATGGAGATGAAATTATTTTTTCCGATGCTCACTTTCCCGCCCATTCGATGGGACCGCAGGTGATCCGCGCTGATGGCCTGTTGGTGAGCGACTTGCTCCAGGCGATTATCCCGTTATTTGAACTGGACAGTTATGCACCGCCGCTGGTGATGATGGCGGCGGTAGAAGGTGACACTCTCGATCCTGAAGTAGAACGACGTTACCGTAATGCGCTTTCACTACAAGCCCCGTGTCCTGACATCATCCGCATCAATCGTTTTGCGTTTTATGAACGGGCGCAAAAAGCCTTTGCGATCGTTATCACAGGCGAACGAGCGAAGTACGGGAATATTCTTTTAAAAAAAGGGGTAACACCGTAA", - "dna_sequence_length": 423, - "functions": [ - "L-fucose mutarotase" - ], - "id": "CDS_2767", - "location": [ - [ - "NC_000913", - 2938888, - "+", - 423 - ] - ], - "md5": "2ca36b6e861754c32648c7f66c9e54d0", - "parent_gene": "", - "protein_md5": "05793d33afddf98c3a809ef19fa95319", - "protein_translation": "MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLVSDLLQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDIIRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVTP", - "protein_translation_length": 140, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2805" - ], - [ - "gene_synonym", - "JW2776" - ], - [ - "gene_synonym", - "ECK2800" - ], - [ - "gene_synonym", - "NP_417285.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACK8" - ], - [ - "gene_synonym", - "fucR" - ], - [ - "gene_synonym", - "GeneID:946905" - ], - [ - "gene_synonym", - "GI:16130712" - ], - [ - "gene_synonym", - "ASAP:ABE-0009195" - ], - [ - "gene_synonym", - "EcoGene:EG10353" - ] - ], - "dna_sequence": "ATGAAAGCGGCACGCCAGCAAGCGATAGTCGACCTGCTGCTGAACCATACCAGCCTGACCACGGAAGCTCTCTCTGAACAGCTAAAGGTCAGTAAAGAAACCATTCGTCGCGATCTCAATGAATTACAGACGCAGGGTAAAATTCTGCGCAATCATGGACGCGCTAAATATATCCACCGTCAAAATCAAGACAGTGGCGATCCCTTTCACATCAGGCTGAAAAGCCATTATGCGCATAAAGCAGATATCGCGCGCGAGGCGCTCGCGTGGATTGAAGAAGGGATGGTGATAGCCTTAGACGCCAGTTCAACTTGCTGGTATCTGGCACGCCAGTTGCCTGACATCAACATTCAGGTCTTCACCAATAGCCATCCGATTTGCCATGAACTCGGTAAACGCGAACGCATTCAACTGATCAGTTCCGGCGGCACACTTGAGCGCAAATATGGCTGTTACGTCAATCCCTCGCTGATTTCCCAACTTAAATCGCTGGAAATCGATCTGTTTATTTTTTCTTGTGAAGGGATCGATAGCAGCGGCGCACTGTGGGACTCCAATGCGATCAACGCTGATTACAAATCGATGCTATTAAAACGTGCCGCGCAATCGTTGTTATTGATTGATAAAAGTAAATTTAATCGTTCAGGGGAAGCCCGCATCGGGCATCTGGATGAGGTAACGCACATTATTTCTGATGAGCGCCAGGTTGCAACTTCTTTGGTAACAGCCTGA", - "dna_sequence_length": 732, - "functions": [ - "l-fucose operon activator" - ], - "id": "CDS_2768", - "location": [ - [ - "NC_000913", - 2939368, - "+", - 732 - ] - ], - "md5": "7218a623cf3b877de1b8965aec625f4a", - "parent_gene": "", - "protein_md5": "1c22e9428d5342ff7ce99f6d8c9c5ee3", - "protein_translation": "MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQTQGKILRNHGRAKYIHRQNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDASSTCWYLARQLPDINIQVFTNSHPICHELGKRERIQLISSGGTLERKYGCYVNPSLISQLKSLEIDLFIFSCEGIDSSGALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEARIGHLDEVTHIISDERQVATSLVTA", - "protein_translation_length": 243, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rlmM" - ], - [ - "gene_synonym", - "ygdE" - ], - [ - "gene_synonym", - "EcoGene:EG11794" - ], - [ - "gene_synonym", - "b2806" - ], - [ - "gene_synonym", - "JW2777" - ], - [ - "gene_synonym", - "GeneID:947283" - ], - [ - "gene_synonym", - "ECK2801" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADR6" - ], - [ - "gene_synonym", - "NP_417286.1" - ], - [ - "gene_synonym", - "GI:16130713" - ], - [ - "gene_synonym", - "ASAP:ABE-0009197" - ] - ], - "dna_sequence": "ATGAATAAGGTTGTATTGCTGTGCCGTCCGGGCTTTGAAAAAGAGTGCGCCGCAGAAATTACCGATAAAGCCGGCCAGCGGGAAATTTTCGGTTTTGCCCGCGTGAAAGAGAATGCGGGTTATGTCATTTATGAATGTTATCAACCTGATGATGGCGATAAGTTAATCCGTGAGCTGCCGTTCAGTTCATTAATTTTTGCCCGCCAGTGGTTTGTGGTGGGGGAACTCCTGCAGCATTTGCCGCCAGAAGATCGTATTACCCCCATTGTCGGCATGTTACAGGGCGTAGTAGAGAAGGGCGGTGAACTGCGTGTTGAAGTTGCCGATACCAACGAAAGCAAAGAGTTACTGAAATTCTGCCGTAAATTTACTGTTCCGCTACGCGCTGCCTTGCGCGATGCCGGGGTGCTGGCGAACTATGAAACGCCGAAGCGTCCGGTTGTGCATGTATTCTTTATTGCACCAGGCTGCTGCTATACCGGTTACTCATACAGCAACAATAATTCGCCGTTCTATATGGGCATTCCGCGCCTGAAATTTCCGGCAGATGCGCCGAGTCGTTCCACGCTCAAACTGGAAGAGGCATTTCATGTGTTTATTCCTGCGGATGAGTGGGATGAACGCCTGGCGAACGGGATGTGGGCGGTGGATTTAGGCGCTTGCCCTGGCGGCTGGACCTACCAACTGGTGAAGCGCAACATGTGGGTTTATTCCGTCGACAACGGCCCGATGGCGCAAAGTCTGATGGATACCGGACAGGTGACGTGGCTGCGGGAAGACGGTTTCAAATTCCGTCCGACGCGCAGCAATATCTCCTGGATGGTATGCGATATGGTTGAAAAACCGGCGAAAGTTGCGGCATTGATGGCGCAGTGGCTGGTTAATGGCTGGTGCCGTGAAACCATTTTCAACCTCAAACTGCCGATGAAAAAACGCTACGAAGAAGTGTCACACAATCTGGCGTATATTCAGGCACAGCTTGATGAACATGGCATAAATGCTCAGATTCAGGCGCGGCAGTTGTATCACGATCGCGAAGAAGTGACGGTGCACGTCCGCCGCATCTGGGCTGCGGTGGGTGGTCGTCGCGACGAGCGATAA", 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"gene_synonym", - "NP_417287.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009199" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADR2" - ], - [ - "gene_synonym", - "GeneID:947279" - ], - [ - "gene_synonym", - "GI:16130714" - ] - ], - "dna_sequence": "ATGACCAGCCGTTTTATGCTGATTTTCGCCGCCATTAGCGGCTTCATTTTTGTGGCTCTGGGCGCTTTTGGCGCGCATGTGTTAAGTAAAACCATGGGGGCCGTTGAGATGGGCTGGATCCAGACCGGCCTCGAATACCAGGCGTTTCATACGCTGGCGATCTTAGGTCTGGCGGTGGCAATGCAGCGTCGCATCAGTATCTGGTTTTACTGGAGTAGCGTTTTCCTCGCGTTAGGCACGGTGTTGTTCAGCGGCAGCCTTTATTGCCTGGCGCTGTCCCATCTGCGTTTGTGGGCGTTTGTCACTCCGGTTGGCGGCGTGAGCTTCCTCGCGGGCTGGGCGTTAATGTTAGTTGGTGCTATCCGTTTAAAGCGCAAGGGCGTAAGTCATGAATAA", - "dna_sequence_length": 396, - "functions": [ - "UPF0382 family inner membrane protein" - ], - "id": "CDS_2770", - "location": [ - [ - "NC_000913", - 2941631, - "-", - 396 - ] - ], - "md5": "3bdc1d9d9852cb816b143d53e356a601", - "parent_gene": "", - "protein_md5": "3dca18030d360a2d65805a168ed98b5d", - "protein_translation": "MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGLEYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVTPVGGVSFLAGWALMLVGAIRLKRKGVSHE", - "protein_translation_length": 131, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11795" - ], - [ - "gene_synonym", - "JW2779" - ], - [ - "gene_synonym", - "ASAP:ABE-0009202" - ], - [ - "gene_synonym", - "ECK2803" - ], - [ - "gene_synonym", - "b2808" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9F6" - ], - [ - "gene_synonym", - "NP_417288.1" - ], - [ - "gene_synonym", - "gcvA" - ], - [ - "gene_synonym", - "GeneID:947278" - ], - [ - "gene_synonym", - "GI:16130715" - ] - ], - "dna_sequence": "ATGTCTAAACGATTACCACCGCTAAATGCCTTACGAGTTTTTGATGCCGCAGCACGCCATTTAAGTTTCACTCGCGCAGCAGAAGAGCTTTTTGTGACCCAAGCCGCAGTAAGTCATCAAATCAAGTCTCTTGAGGATTTTTTGGGGCTAAAACTGTTCCGCCGCCGTAATCGTTCACTCCTGCTGACCGAGGAAGGGCAAAGCTATTTCCTCGATATCAAAGAGATATTTTCGCAATTAACCGAAGCGACGCGTAAACTCCAGGCCCGTAGCGCCAAGGGGGCGTTGACGGTCAGTTTACTCCCCAGTTTCGCCATTCATTGGTTGGTTCCGCGACTTTCCAGCTTTAATTCAGCTTATCCGGGAATTGACGTTCGAATCCAGGCGGTTGATCGTCAGGAAGATAAGCTGGCGGATGATGTTGATGTGGCGATATTTTATGGTCGGGGCAACTGGCCGGGGCTACGGGTGGAAAAACTGTACGCCGAATATTTATTGCCGGTGTGTTCGCCGCTACTGCTGACTGGCGAAAAACCCTTGAAGACACCGGAAGATCTGGCTAAACATACGTTATTACATGATGCTTCGCGCCGTGACTGGCAGACATATACCCGACAGTTGGGGTTAAATCATATCAACGTTCAGCAAGGGCCAATTTTTAGCCATAGCGCCATGGTGCTGCAAGCGGCTATCCACGGGCAGGGAGTGGCGCTGGCAAATAACGTGATGGCGCAATCTGAAATCGAGGCCGGACGTCTTGTTTGCCCGTTTAATGATGTTCTGGTCAGTAAAAATGCTTTTTATCTGGTTTGTCATGACAGTCAGGCAGAACTGGGTAAAATAGCCGCCTTTCGCCAATGGATCCTGGCGAAAGCCGCTGCTGAACAAGAAAAATTCCGCTTTCGTTATGAACAATAA", - "dna_sequence_length": 918, - "functions": [ - "glycine cleavage system transcriptional activator", - "autorepressor" - ], - "id": "CDS_2771", - "location": [ - [ - "NC_000913", - 2942567, - "-", - 918 - ] - ], - "md5": "ed3dafb80234fa2fb20b76875a6e07cf", - "parent_gene": "", - "protein_md5": "b264c05bcf652e64087840e0bcf76319", - "protein_translation": "MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSAYPGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGEKPLKTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAAAEQEKFRFRYEQ", - "protein_translation_length": 305, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P65292" - ], - [ - "gene_synonym", - "EcoGene:EG13081" - ], - [ - "gene_synonym", - "ASAP:ABE-0009214" - ], - [ - "gene_synonym", - "b2809" - ], - [ - "gene_synonym", - "NP_417289.2" - ], - [ - "gene_synonym", - "ygdI" - ], - [ - "gene_synonym", - "ECK2805" - ], - [ - "gene_synonym", - "GI:90111491" - ], - [ - "gene_synonym", - "JW5448" - ], - [ - "gene_synonym", - "GeneID:947276" - ] - ], - "dna_sequence": "ATGAAAAAGACTGCCGCAATTATTTCTGCCTGTATGCTGACTTTTGCCCTGAGCGCCTGTTCCGGTTCGAACTATGTGATGCACACCAATGACGGACGTACCATCGTCTCTGACGGCAAACCACAGACTGATAACGATACCGGTATGATTTCGTATAAAGACGCTAATGGCAACAAACAGCAGATCAACCGTACTGACGTGAAAGAGATGGTCGAACTGGATCAGTAA", - "dna_sequence_length": 228, - "functions": [ - "DUF903 family verified lipoprotein" - ], - "id": "CDS_2772", - "location": [ - [ - "NC_000913", - 2943145, - "-", - 228 - ] - ], - "md5": "e955e564f889cd76e29952ffe6557e66", - "parent_gene": "", - "protein_md5": "bf4b447bd2f3097b62a413fb7083ab2e", - "protein_translation": "MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTDNDTGMISYKDANGNKQQINRTDVKEMVELDQ", - "protein_translation_length": 75, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2810" - ], - [ - "gene_synonym", - "JW2781" - ], - [ - "gene_synonym", - "EcoGene:EG13082" - ], - [ - "gene_synonym", - "ASAP:ABE-0009218" - ], - [ - "gene_synonym", - "ECK2806" - ], - [ - "gene_synonym", - "ygdJ" - ], - [ - "gene_synonym", - "NP_417290.1" - ], - [ - "gene_synonym", - "GeneID:947275" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46925" - ], - [ - "gene_synonym", - "csdA" - ], - [ - "gene_synonym", - "GI:16130717" - ] - ], - "dna_sequence": "ATGAACGTTTTTAATCCCGCGCAGTTTCGCGCCCAGTTTCCCGCACTACAGGATGCGGGCGTCTATCTCGACAGCGCCGCGACCGCGCTTAAACCTGAAGCCGTGGTTGAAGCCACCCAACAGTTTTACAGTCTGAGCGCCGGAAACGTCCATCGCAGCCAGTTTGCCGAAGCCCAACGCCTGACCGCGCGTTATGAAGCTGCACGAGAGAAAGTGGCGCAATTACTGAATGCACCGGATGATAAAACTATCGTCTGGACGCGCGGCACCACTGAATCCATCAACATGGTGGCACAATGCTATGCGCGTCCGCGTCTGCAACCGGGCGATGAGATTATTGTCAGCGTGGCAGAACACCACGCCAACCTCGTCCCCTGGCTGATGGTCGCCCAACAAACTGGAGCCAAAGTGGTGAAATTGCCGCTTAATGCGCAGCGACTGCCGGATGTCGATTTGTTGCCAGAACTGATTACTCCCCGTAGTCGGATTCTGGCGTTGGGTCAGATGTCGAACGTTACTGGCGGTTGCCCGGATCTGGCGCGAGCGATTACCTTTGCTCATTCAGCCGGGATGGTGGTGATGGTTGATGGTGCTCAGGGGGCAGTGCATTTCCCCGCGGATGTTCAGCAACTGGATATTGATTTCTATGCTTTTTCAGGTCACAAACTGTATGGCCCGACAGGTATCGGCGTGCTGTATGGTAAATCAGAACTGCTGGAGGCGATGTCGCCCTGGCTGGGCGGCGGCAAAATGGTTCACGAAGTGAGTTTTGACGGCTTCACGACTCAATCTGCGCCGTGGAAACTGGAAGCTGGAACGCCAAATGTCGCTGGTGTCATAGGATTAAGCGCGGCGCTGGAATGGCTGGCAGATTACGATATCAACCAGGCCGAAAGCTGGAGCCGTAGCTTAGCAACGCTGGCGGAAGATGCGCTGGCGAAACGTCCCGGCTTTCGTTCATTCCGCTGCCAGGATTCCAGCCTGCTGGCCTTTGATTTTGCTGGCGTTCATCATAGCGATATGGTGACGCTGCTGGCGGAGTACGGTATTGCCCTGCGGGCCGGGCAGCATTGCGCTCAGCCGCTACTGGCAGAATTAGGCGTAACCGGCACACTGCGCGCCTCTTTTGCGCCATATAATACAAAGAGTGATGTGGATGCGCTGGTGAATGCCGTTGACCGCGCGCTGGAATTATTGGTGGATTAA", 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"gene_synonym", - "ECK2807" - ], - [ - "gene_synonym", - "ygdK" - ], - [ - "gene_synonym", - "GI:16130718" - ], - [ - "gene_synonym", - "GeneID:947274" - ], - [ - "gene_synonym", - "ASAP:ABE-0009220" - ], - [ - "gene_synonym", - "NP_417291.1" - ], - [ - "gene_synonym", - "csdE" - ] - ], - "dna_sequence": "ATGACAAACCCGCAATTCGCCGGACATCCGTTCGGCACAACCGTAACCGCAGAAACGTTACGCAATACCTTCGCACCGTTGACGCAATGGGAAGATAAATATCGCCAGTTGATCATGCTGGGGAAACAGCTTCCGGCATTGCCAGACGAGTTAAAAGCGCAGGCTAAAGAGATTGCCGGATGCGAAAACCGCGTCTGGCTGGGATATACAGTGGCTGAAAACGGCAAAATGCATTTCTTTGGCGACAGCGAAGGGCGCATTGTGCGCGGCCTGCTGGCGGTGTTGTTGACTGCCGTTGAGGGGAAAACCGCCGCCGAGTTGCAGGCACAGTCACCACTGGCATTGTTTGATGAGCTGGGATTACGTGCGCAGCTTAGCGCCTCACGCAGCCAGGGGTTAAATGCGTTAAGCGAGGCGATTATCGCTGCGACGAAGCAGGTTTAA", - "dna_sequence_length": 444, - "functions": [ - "CsdA-binding activator", - "Fe-S protein" - ], - "id": "CDS_2774", - "location": [ - [ - "NC_000913", - 2944542, - "+", - 444 - ] - ], - "md5": "57225080affacdd1d532b14d66f2fc5b", - "parent_gene": "", - "protein_md5": "c1e3800a5640820e3df98e8023db8756", - "protein_translation": "MTNPQFAGHPFGTTVTAETLRNTFAPLTQWEDKYRQLIMLGKQLPALPDELKAQAKEIAGCENRVWLGYTVAENGKMHFFGDSEGRIVRGLLAVLLTAVEGKTAAELQAQSPLALFDELGLRAQLSASRSQGLNALSEAIIAATKQV", - "protein_translation_length": 147, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2812" - ], - [ - "gene_synonym", - "JW2783" - ], - [ - "gene_synonym", - "ECK2808" - ], - [ - "gene_synonym", - "EcoGene:EG13084" - ], - [ - "gene_synonym", - "ygdL" - ], - [ - "gene_synonym", - "NP_417292.1" - ], - [ - "gene_synonym", - "tcdA" - ], - [ - "gene_synonym", - "GI:16130719" - ], - [ - "gene_synonym", - "csdL" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46927" - ], - [ - "gene_synonym", - "ASAP:ABE-0009223" - ], - [ - "gene_synonym", - "GeneID:947291" - ] - ], - "dna_sequence": "ATGTCTGTGGTAATTAGTGATGCATGGCGTCAGCGTTTTGGTGGCACAGCGCGTCTGTATGGTGAAAAAGCGTTGCAACTGTTTGCTGACGCGCATATTTGTGTGGTTGGTATCGGTGGTGTCGGTTCCTGGGCGGCGGAAGCGCTGGCGCGCACGGGGATTGGCGCAATCACGCTTATCGATATGGATGATGTGTGCGTCACCAATACCAATCGGCAAATTCATGCCCTGCGCGATAACGTTGGGCTGGCAAAAGCGGAAGTTATGGCGGAGCGTATTCGCCAGATTAACCCGGAGTGCCGTGTAACGGTGGTGGATGATTTCGTGACGCCGGATAACGTAGCGCAGTATATGAGCGTGGGTTATTCGTACGTGATTGATGCCATTGATAGTGTACGGCCCAAAGCGGCGCTGATTGCTTATTGTCGGCGCAATAAAATCCCACTGGTCACAACCGGTGGCGCGGGTGGGCAGATTGATCCGACGCAGATTCAGGTTACCGATCTGGCGAAAACGATTCAGGACCCGCTGGCGGCGAAGTTGCGCGAGCGCCTGAAAAGCGATTTTGGCGTAGTGAAAAACAGTAAAGGTAAGCTCGGCGTGGATTGCGTGTTTTCTACTGAAGCGCTGGTGTACCCGCAGTCAGACGGTACGGTGTGTGCGATGAAAGCCACGGCAGAAGGGCCGAAGCGGATGGATTGTGCATCTGGATTTGGCGCGGCAACGATGGTGACCGCCACCTTTGGGTTTGTTGCGGTTTCTCATGCGCTGAAGAAGATGATGGCGAAAGCGGCGCGTCAGGGTTAA", - "dna_sequence_length": 807, - "functions": [ - "tRNA threonylcarbamoyladenosine dehydratase", - "sulfur acceptor for CsdA" - ], - "id": "CDS_2775", - "location": [ - [ - "NC_000913", - 2945842, - "-", - 807 - ] - ], - "md5": "fcae45b6217b1169fc70e0ba7b800974", - "parent_gene": "", - "protein_md5": "32cd920929ed503e35d0911bc3b6f973", - "protein_translation": "MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMSVGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGTVCAMKATAEGPKRMDCASGFGAATMVTATFGFVAVSHALKKMMAKAARQG", - "protein_translation_length": 268, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13085" - ], - [ - "gene_synonym", - "b2813" - ], - [ - "gene_synonym", - "ECK2809" - ], - [ - "gene_synonym", - "JW2784" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A935" - ], - [ - "gene_synonym", - "ygdM" - ], - [ - "gene_synonym", - "GeneID:944964" - ], - [ - "gene_synonym", - "NP_417293.1" - ], - [ - "gene_synonym", - "mlt" - ], - [ - "gene_synonym", - "ASAP:ABE-0009228" - ], - [ - "gene_synonym", - "mltA" - ], - [ - "gene_synonym", - "GI:16130720" - ] - ], - "dna_sequence": "ATGAAAGGACGTTGGGTAAAGTACCTTCTTATGGGCACGGTTGTGGCAATGCTTGCCGCCTGCTCTTCCAAACCAACCGATCGCGGACAGCAATATAAAGACGGGAAATTTACCCAGCCTTTCTCTCTGGTGAACCAGCCAGATGCCGTTGGCGCGCCGATTAACGCCGGTGATTTTGCCGAGCAAATTAACCATATCCGTAATTCGTCACCGCGTCTGTATGGCAACCAGAGTAATGTTTATAACGCGGTGCAAGAGTGGCTGCGCGCAGGCGGTGATACCCGCAATATGCGCCAGTTCGGCATTGATGCCTGGCAGATGGAAGGTGCCGACAACTATGGTAACGTGCAGTTTACCGGTTATTACACGCCGGTAATTCAGGCGCGCCATACCCGCCAGGGCGAGTTCCAGTATCCTATTTACCGTATGCCGCCAAAACGTGGTCGTCTGCCGTCTCGTGCGGAGATCTACGCGGGGGCATTGAGTGATAAATATATTCTCGCTTACAGTAACTCCCTGATGGATAACTTCATTATGGATGTGCAGGGTAGTGGGTATATCGACTTTGGTGATGGCAGTCCGCTTAACTTTTTCAGCTATGCAGGGAAAAACGGTCATGCCTATCGCAGCATTGGTAAGGTGCTGATCGACCGTGGCGAAGTGAAAAAAGAAGATATGTCGATGCAGGCGATTCGTCACTGGGGCGAAACACACAGTGAAGCCGAGGTTCGCGAGCTGCTGGAACAGAACCCGTCTTTCGTCTTCTTTAAACCGCAATCTTTTGCTCCGGTGAAAGGGGCAAGTGCGGTGCCGCTGGTTGGTCGCGCGTCAGTTGCCTCTGATCGTTCCATTATTCCGCCAGGTACTACCTTGCTGGCAGAAGTGCCGTTGCTGGATAATAACGGCAAATTTAATGGTCAGTACGAACTGCGTCTGATGGTGGCGCTGGATGTCGGTGGTGCAATCAAAGGCCAACACTTCGATATCTATCAAGGGATCGGGCCGGAAGCCGGACACCGCGCAGGTTGGTACAACCACTATGGACGTGTCTGGGTGCTGAAAACCGCCCCGGGCGCAGGTAACGTCTTTAGCGGCTGA", - "dna_sequence_length": 1098, - "functions": [ - "membrane-bound lytic murein transglycosylase A" - ], - "id": "CDS_2776", - "location": [ - [ - "NC_000913", - 2947178, - "-", - 1098 - ] - ], - "md5": "3361c592073245fa9e2766653cb628a7", - "parent_gene": "", - "protein_md5": "7a00ae8c22df3914bbbf3c359488f179", - "protein_translation": "MKGRWVKYLLMGTVVAMLAACSSKPTDRGQQYKDGKFTQPFSLVNQPDAVGAPINAGDFAEQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGIDAWQMEGADNYGNVQFTGYYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGALSDKYILAYSNSLMDNFIMDVQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDRGEVKKEDMSMQAIRHWGETHSEAEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRASVASDRSIIPPGTTLLAEVPLLDNNGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIGPEAGHRAGWYNHYGRVWVLKTAPGAGNVFSG", - "protein_translation_length": 365, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13086" - ], - [ - "gene_synonym", - "b2817" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63883" - ], - [ - "gene_synonym", - "ygdN" - ], - [ - "gene_synonym", - "ECK2813" - ], - [ - "gene_synonym", - "GI:90111492" - ], - [ - "gene_synonym", - "ASAP:ABE-0009238" - ], - [ - "gene_synonym", - "amiC" - ], - [ - "gene_synonym", - "NP_417294.4" - ], - [ - "gene_synonym", - "GeneID:947293" - ], - [ - "gene_synonym", - "JW5449" - ] - ], - "dna_sequence": "ATGTCAGGATCCAACACTGCAATCAGCCGTCGTCGTTTACTGCAAGGCGCGGGTGCCATGTGGCTATTGAGCGTAAGTCAGGTCAGTCTGGCTGCGGTCAGCCAGGTCGTGGCGGTGCGCGTCTGGCCTGCGTCCAGCTACACCCGCGTGACGGTGGAATCAAATCGTCAGCTGAAATATAAGCAGTTCGCGTTGAGTAACCCTGAACGCGTGGTGGTGGATATCGAAGATGTAAACCTGAACTCGGTACTCAAGGGGATGGCGGCACAAATTCGTGCAGACGACCCGTTCATCAAGTCGGCGCGCGTCGGGCAATTTGACCCGCAAACCGTACGGATGGTTTTTGAATTAAAGCAAAACGTAAAACCGCAGCTGTTTGCCCTTGCGCCGGTCGCCGGGTTTAAAGAGCGTCTGGTGATGGACCTCTATCCGGCCAATGCACAGGATATGCAGGACCCGCTGCTGGCGCTGCTGGAGGATTACAACAAAGGCGACCTCGAAAAGCAGGTGCCGCCAGCGCAAAGTGGTCCACAACCGGGTAAAGCAGGGCGCGATCGTCCGATTGTCATTATGCTTGACCCTGGCCACGGTGGCGAAGACTCCGGTGCGGTGGGGAAATACAAAACGCGCGAAAAAGATGTGGTATTGCAAATAGCTCGCCGTTTGCGCTCTCTGATCGAGAAAGAGGGCAATATGAAGGTGTACATGACGCGCAATGAAGACATCTTCATTCCATTGCAAGTGCGCGTAGCAAAAGCCCAGAAACAGCGTGCTGACCTGTTTGTCTCTATCCATGCCGACGCCTTTACCAGTCGTCAGCCGAGCGGTTCCTCTGTGTTTGCGCTCTCAACCAAAGGTGCAACCAGTACTGCGGCAAAATATCTGGCACAAACCCAGAACGCCTCGGACTTGATTGGTGGCGTGAGCAAAAGCGGTGACCGCTATGTCGACCACACCATGTTCGATATGGTACAGTCGCTGACCATTGCCGACAGCCTGAAGTTTGGTAAAGCGGTACTGAATAAGCTCGGTAAAATCAACAAGCTGCATAAAAATCAAGTTGAACAGGCCGGGTTTGCCGTACTAAAGGCACCAGATATTCCCTCCATTCTGGTCGAAACGGCGTTTATCAGTAACGTTGAGGAAGAGCGTAAACTGAAAACGGCGACTTTCCAGCAGGAAGTTGCGGAGTCTATTCTTGCGGGGATTAAAGCGTATTTTGCCGATGGGGCGACGCTGGCGAGAAGGGGATGA", - "dna_sequence_length": 1254, - "functions": [ - "N-acetylmuramoyl-L-alanine amidase" - ], - "id": "CDS_2777", - "location": [ - [ - "NC_000913", - 2949010, - "-", - 1254 - ] - ], - "md5": "b479d3473e4a707a72f3543131e749e3", - "parent_gene": "", - "protein_md5": "e41cf79bbd5fb69fb0007a3feff0392a", - "protein_translation": "MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPASSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLEDYNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQIARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQQEVAESILAGIKAYFADGATLARRG", - "protein_translation_length": 417, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2786" - ], - [ - "gene_synonym", - "NP_417295.1" - ], - [ - "gene_synonym", - "ECK2814" - ], - [ - "gene_synonym", - "b2818" - ], - [ - "gene_synonym", - "GeneID:947289" - ], - [ - "gene_synonym", - "EcoGene:EG10063" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6C5" - ], - [ - "gene_synonym", - "Arg1" - ], - [ - "gene_synonym", - "argA" - ], - [ - "gene_synonym", - "argB" - ], - [ - "gene_synonym", - "ASAP:ABE-0009245" - ], - [ - "gene_synonym", - "Arg2" - ], - [ - "gene_synonym", - "GI:16130722" - ] - ], - "dna_sequence": "GTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGTCTATGGCGCACGTCCGCAGATCGACGCAAATCTGGCTGCGCATCACCACGAACCGCTGTATCACAAGAATATACGTGTGACCGACGCCAAAACACTGGAACTGGTGAAGCAGGCTGCGGGAACATTGCAACTGGATATTACTGCTCGCCTGTCGATGAGTCTCAATAACACGCCGCTGCAGGGCGCGCATATCAACGTCGTCAGTGGCAATTTTATTATTGCCCAGCCGCTGGGCGTCGATGACGGCGTGGATTACTGCCATAGCGGGCGTATCCGGCGGATTGATGAAGACGCGATCCATCGTCAACTGGACAGCGGTGCAATAGTGCTAATGGGGCCGGTCGCTGTTTCAGTCACTGGCGAGAGCTTTAACCTGACCTCGGAAGAGATTGCCACTCAACTGGCCATCAAACTGAAAGCTGAAAAGATGATTGGTTTTTGCTCTTCCCAGGGCGTCACTAATGACGACGGTGATATTGTCTCCGAACTTTTCCCTAACGAAGCGCAAGCGCGGGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTTTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCGCAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTATTCAGCGCGATAACACGACTATTGCCTGCGCCGCGCTCTATCCGTTCCCGGAAGAGAAGATTGGGGAAATGGCCTGTGTGGCAGTTCACCCGGATTACCGCAGTTCATCAAGGGGTGAAGTTCTGCTGGAACGCATTGCCGCTCAGGCGAAGCAGAGCGGCTTAAGCAAATTGTTTGTGCTGACCACGCGCAGTATTCACTGGTTCCAGGAACGTGGATTTACCCCAGTGGATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAA", - "dna_sequence_length": 1332, - "functions": [ - "amino acid N-acetyltransferase and inactive acetylglutamate kinase" - ], - "id": "CDS_2778", - "location": [ - [ - "NC_000913", - 2949242, - "+", - 1332 - ] - ], - "md5": "6c24a6372e839afd07533b5ab02d11ea", - "parent_gene": "", - "protein_md5": "d7680e4d91f9ca14e4f6e4c08f7cdaa7", - "protein_translation": "MVKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSSIVNDIGLLHSLGIRLVVVYGARPQIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAGTLQLDITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDAIHRQLDSGAIVLMGPVAVSVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDDGDIVSELFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGALLQELFSRDGIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEIDKFTIIQRDNTTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIAAQAKQSGLSKLFVLTTRSIHWFQERGFTPVDIDLLPESKKQLYNYQRKSKVLMADLG", - "protein_translation_length": 443, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947287" - ], - [ - "gene_synonym", - "JW2787" - ], - [ - "gene_synonym", - "ECK2815" - ], - [ - "gene_synonym", - "b2819" - ], - [ - "gene_synonym", - "ASAP:ABE-0009247" - ], - [ - "gene_synonym", - "NP_417296.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04993" - ], - [ - "gene_synonym", - "recD" - ], - [ - "gene_synonym", - "EcoGene:EG10826" - ], - [ - "gene_synonym", - "hopE" - ], - [ - "gene_synonym", - "GI:16130723" - ] - ], - "dna_sequence": "ATGAAATTGCAAAAGCAATTACTGGAAGCTGTGGAGCACAAACAGCTACGCCCGCTGGATGTGCAATTTGCCCTGACCGTGGCGGGAGATGAACATCCTGCCGTCACCCTCGCGGCGGCACTGTTAAGTCATGATGCCGGAGAGGGACACGTTTGTTTGCCGCTTTCACGACTGGAAAATAACGAGGCGTCGCATCCGCTGTTGGCGACCTGTGTCAGTGAAATCGGTGAGCTACAAAATTGGGAAGAATGCTTGCTGGCTTCTCAAGCGGTCAGCAGGGGAGATGAACCCACGCCGATGATCCTCTGTGGCGATCGTCTTTATTTGAATCGCATGTGGTGTAACGAGCGCACAGTGGCACGCTTTTTCAACGAAGTGAATCATGCCATTGAGGTTGATGAAGCTCTACTGGCGCAAACCCTGGACAAACTTTTTCCAGTAAGCGATGAAATTAACTGGCAAAAAGTTGCGGCGGCAGTGGCGCTGACGCGGCGGATCTCGGTGATTTCCGGCGGCCCTGGCACCGGTAAAACGACCACCGTAGCGAAGTTGCTGGCAGCGTTAATTCAAATGGCCGACGGCGAACGCTGCCGTATCCGTCTGGCTGCACCAACGGGTAAAGCTGCCGCGCGCTTAACCGAATCTCTCGGCAAGGCTTTGCGACAGTTACCGCTGACCGATGAACAAAAGAAACGCATTCCGGAAGATGCCAGCACTTTGCACCGATTGCTGGGCGCGCAGCCGGGTAGCCAGCGTTTACGTCATCATGCCGGTAACCCGCTGCATCTTGATGTGCTGGTGGTAGATGAAGCGTCAATGATCGATCTGCCTATGATGTCGAGACTGATCGACGCCTTGCCCGATCATGCGCGAGTGATCTTTCTCGGCGATCGTGATCAACTGGCCTCGGTTGAGGCTGGGGCTGTGCTGGGCGATATCTGCGCTTATGCCAACGCGGGCTTTACCGCCGAGCGTGCCAGGCAGCTAAGCCGCCTGACGGGGACTCACGTTCCGGCAGGAACCGGCACAGAAGCGGCATCTTTGCGCGACAGTCTCTGCCTGCTGCAAAAAAGCTATCGTTTCGGCAGCGATTCTGGCATTGGTCAGTTAGCTGCGGCGATCAACCGTGGTGATAAAACGGCAGTGAAAACCGTTTTTCAGCAGGATTTTACTGATATCGAAAAACGGCTTTTACAGAGCGGCGAAGATTATATTGCGATGCTTGAGGAAGCTCTTGCGGGTTACGGACGTTATCTGGATCTGCTGCAAGCGCGTGCCGAGCCGGATTTAATCATTCAGGCGTTCAATGAGTACCAGCTTTTGTGCGCCCTGCGGGAAGGGCCGTTTGGCGTGGCTGGACTGAATGAGCGAATTGAGCAGTTTATGCAACAGAAGCGCAAAATTCATCGTCATCCGCACTCTCGTTGGTACGAAGGTCGACCGGTGATGATTGCCCGTAATGACAGCGCGCTTGGGTTGTTTAATGGCGATATCGGTATTGCGCTGGATCGCGGGCAGGGGACGCGCGTCTGGTTTGCGATGCCGGACGGCAATATTAAGTCTGTGCAACCGAGTCGCTTGCCAGAGCACGAAACTACGTGGGCGATGACGGTACATAAATCGCAGGGATCGGAGTTCGACCATGCGGCGTTGATTTTGCCGAGCCAACGCACGCCGGTAGTAACGCGAGAGCTGGTTTATACCGCGGTGACCCGCGCGCGTCGCCGTCTGTCGCTGTATGCCGATGAGCGCATATTAAGTGCGGCAATCGCCACTCGTACTGAGCGGCGCAGTGGTCTGGCGGCGTTGTTTAGTTCACGGGAATAA", - "dna_sequence_length": 1827, - "functions": [ - "exonuclease V (RecBCD complex), alpha chain" - ], - "id": "CDS_2779", - "location": [ - [ - "NC_000913", - 2952461, - "-", - 1827 - ] - ], - "md5": "06af0ebafc24fbf3d94129ba37c8b1fc", - "parent_gene": "", - "protein_md5": "43c5d63879fbf7efa1bb8bd7ee5fb351", - "protein_translation": "MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLSRLENNEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYADERILSAAIATRTERRSGLAALFSSRE", - "protein_translation_length": 608, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417297.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08394" - ], - [ - "gene_synonym", - "recB" - ], - [ - "gene_synonym", - "JW2788" - ], - [ - "gene_synonym", - "ECK2816" - ], - [ - "gene_synonym", - "ior" - ], - [ - "gene_synonym", - "rorA" - ], - [ - "gene_synonym", - "b2820" - ], - [ - "gene_synonym", - "ASAP:ABE-0009249" - ], - [ - "gene_synonym", - "GI:16130724" - ], - [ - "gene_synonym", - "EcoGene:EG10824" - ], - [ - "gene_synonym", - "GeneID:947286" - ] - ], - "dna_sequence": "ATGAGTGATGTCGCCGAGACACTAGATCCTTTGCGCTTGCCCTTACAGGGTGAGCGCCTGATTGAAGCCTCTGCCGGCACAGGCAAAACCTTTACGATTGCGGCGCTCTATTTGCGCCTGTTACTTGGACTAGGCGGTTCCGCCGCCTTTCCCCGCCCGCTGACCGTTGAAGAACTGCTGGTGGTCACCTTTACCGAGGCTGCCACGGCAGAATTGCGCGGTCGTATCCGTAGCAATATCCACGAGTTGCGCATCGCCTGTCTGCGTGAAACCACCGACAATCCACTGTACGAACGCCTGCTGGAAGAGATCGACGATAAAGCGCAAGCCGCGCAGTGGTTGTTGTTAGCCGAACGGCAGATGGATGAAGCGGCAGTCTTTACTATTCACGGCTTTTGCCAGCGCATGCTCAACCTGAATGCCTTTGAATCCGGCATGCTGTTTGAGCAGCAGCTGATTGAAGATGAGTCTCTGCTACGCTACCAGGCCTGCGCCGATTTCTGGCGTCGCCACTGCTACCCGCTGCCGCGTGAAATAGCCCAGGTCGTCTTTGAAACCTGGAAAGGGCCGCAGGCGTTGCTGCGCGATATTAATCGTTATCTGCAAGGCGAAGCGCCGGTTATCAAAGCACCGCCGCCCGATGATGAAACGCTGGCTTCCCGTCACGCGCAAATTGTGGCGCGTATTGATACGGTAAAACAGCAGTGGCGCGACGCAGTGGGTGAACTGGATGCGCTGATCGAATCTTCTGGTATTGATCGACGCAAGTTTAACCGTAGCAATCAGGCTAAATGGATCGACAAGATCAGCGCCTGGGCAGAAGAAGAGACAAACAGTTATCAGTTGCCGGAGTCGCTGGAAAAATTCTCCCAGCGTTTCTTAGAAGATCGCACGAAGGCCGGGGGGGAAACCCCGCGACATCCACTGTTTGAGGCGATCGATCAACTGCTTGCAGAACCATTGTCGATCCGCGATCTGGTGATCACCCGCGCATTGGCTGAGATCCGCGAAACAGTAGCGCGTGAAAAACGCCGCCGTGGCGAATTGGGTTTTGATGACATGTTAAGTCGGCTCGATTCCGCGCTGCGTAGCGAAAGCGGTGAGGTGTTGGCAGCGGCGATCCGTACGCGATTCCCGGTGGCAATGATCGATGAATTTCAGGATACCGACCCCCAGCAGTACCGAATTTTTCGCCGTATCTGGCACCATCAGCCGGAAACCGCATTGTTGCTAATTGGCGACCCGAAGCAGGCCATATATGCATTCCGGGGTGCGGATATCTTCACTTATATGAAGGCGCGTAGCGAAGTTCACGCCCACTACACTTTAGACACCAACTGGCGTTCCGCACCAGGAATGGTGAACAGCGTGAATAAGCTTTTCAGCCAGACTGATGACGCGTTCATGTTTCGCGAAATACCGTTTATTCCAGTGAAATCAGCCGGGAAAAATCAGGCGTTACGTTTTGTATTTAAAGGTGAAACACAGCCTGCGATGAAAATGTGGCTGATGGAAGGCGAAAGCTGCGGCGTTGGCGATTATCAAAGTACCATGGCGCAGGTATGTGCTGCGCAAATCCGCGACTGGCTACAAGCCGGACAGCGGGGCGAAGCGTTGCTGATGAACGGCGACGACGCGCGTCCGGTGCGTGCTTCGGACATCAGTGTGCTGGTGCGCAGCCGCCAGGAGGCCGCCCAGGTGCGCGATGCCTTAACGTTGCTGGAAATCCCTTCCGTTTACCTTTCGAACCGCGACAGTGTTTTTGAAACTCTGGAAGCGCAGGAAATGCTTTGGTTGTTGCAGGCGGTGATGACGCCCGAACGTGAGAACACCCTGCGTAGTGCGCTGGCAACGTCAATGATGGGGCTGAACGCGCTGGATATCGAAACGCTGAACAATGACGAACATGCGTGGGATGTGGTAGTCGAAGAGTTCGATGGTTATCGGCAAATCTGGCGCAAACGTGGCGTTATGCCGATGCTGCGGGCGCTGATGTCGGCGCGTAACATTGCTGAAAACTTGCTGGCAACGGCAGGCGGTGAGCGGCGTCTTACCGATATCTTGCATATCAGCGAACTGCTACAAGAAGCCGGAACGCAGCTGGAAAGTGAACATGCGCTGGTACGCTGGTTATCGCAACATATCCTCGAGCCAGACAGTAATGCCTCCAGCCAACAAATGCGTCTCGAAAGTGATAAACATCTGGTGCAGATTGTCACGATCCACAAATCGAAAGGGCTGGAATATCCATTGGTCTGGCTGCCGTTTATCACCAATTTCCGCGTCCAGGAGCAGGCGTTTTATCACGATCGCCACTCGTTTGAGGCAGTTCTGGATCTTAATGCTGCGCCAGAAAGCGTCGACCTCGCGGAGGCCGAACGTCTGGCGGAAGATCTGCGTTTGCTTTACGTGGCGCTGACACGTTCGGTTTGGCATTGCAGTCTCGGCGTTGCACCGCTGGTGCGCCGTCGTGGCGATAAAAAAGGTGACACCGACGTCCACCAAAGTGCGCTCGGGCGTTTGCTGCAAAAAGGGGAACCGCAAGATGCGGCAGGGCTTCGCACCTGTATTGAAGCGTTATGCGATGATGATATTGCCTGGCAAACGGCACAAACTGGTGATAACCAACCCTGGCAGGTTAATGATGTTTCTACAGCAGAGCTGAATGCGAAGACGTTACAACGATTGCCCGGCGATAACTGGCGCGTCACCAGCTACTCTGGTTTGCAACAGCGTGGTCACGGTATCGCCCAGGATTTGATGCCTCGGCTGGATGTCGATGCTGCAGGCGTTGCCAGCGTCGTTGAAGAACCGACGTTAACACCACATCAGTTTCCGCGCGGTGCGTCACCGGGGACGTTCTTGCACAGTTTGTTTGAAGACCTGGATTTTACCCAGCCGGTTGACCCGAACTGGGTGCGGGAAAAACTGGAACTCGGCGGCTTTGAATCGCAGTGGGAACCGGTATTGACCGAGTGGATCACGGCTGTCCTCCAGGCACCTCTCAATGAAACCGGCGTAAGCCTGAGTCAACTTTCCGCCCGCAATAAACAGGTGGAGATGGAGTTTTATCTGCCGATTAGTGAACCGCTTATCGCCAGTCAGCTTGATACGTTAATCCGCCAGTTTGACCCGCTATCCGCAGGCTGCCCGCCGCTGGAGTTCATGCAGGTACGTGGCATGTTAAAAGGCTTTATCGACCTGGTGTTCCGCCACGAAGGGCGTTATTACCTGCTCGACTATAAATCCAACTGGTTGGGTGAAGACAGTTCGGCTTACACCCAACAGGCTATGGCAGCGGCAATGCAGGCACACCGCTATGATCTGCAATATCAGCTTTATACCCTGGCGCTGCATCGTTATCTGCGCCATCGCATTGCTGATTACGACTATGAGCACCACTTTGGCGGCGTTATTTATCTGTTCCTGCGTGGCGTTGATAAAGAACATCCGCAACAGGGGATTTACACAACCCGACCCAACGCCGGGTTGATTGCCCTGATGGATGAGATGTTTGCCGGTATGACCCTGGAGGAGGCGTAA", - "dna_sequence_length": 3543, - "functions": [ - "exonuclease V (RecBCD complex), beta subunit" - ], - "id": "CDS_2780", - "location": [ - [ - "NC_000913", - 2956003, - "-", - 3543 - ] - ], - "md5": "cb4ca10cee7cc364b064f02b47e875af", - "parent_gene": "", - "protein_md5": "0056f083a72f8d0989b4e00704f0bfa9", - "protein_translation": "MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLEEIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETLASRHAQIVARIDTVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIDKISAWAEEETNSYQLPESLEKFSQRFLEDRTKAGGETPRHPLFEAIDQLLAEPLSIRDLVITRALAEIRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDVVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPWQVNDVSTAELNAKTLQRLPGDNWRVTSYSGLQQRGHGIAQDLMPRLDVDAAGVASVVEEPTLTPHQFPRGASPGTFLHSLFEDLDFTQPVDPNWVREKLELGGFESQWEPVLTEWITAVLQAPLNETGVSLSQLSARNKQVEMEFYLPISEPLIASQLDTLIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGEDSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYEHHFGGVIYLFLRGVDKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA", - "protein_translation_length": 1180, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05458" - ], - [ - "gene_synonym", - "EcoGene:EG10786" - ], - [ - "gene_synonym", - "ECK2817" - ], - [ - "gene_synonym", - "JW2789" - ], - [ - "gene_synonym", - "b2821" - ], - [ - "gene_synonym", - "GI:16130725" - ], - [ - "gene_synonym", - "GeneID:947284" - ], - [ - "gene_synonym", - "ASAP:ABE-0009252" - ], - [ - "gene_synonym", - "NP_417298.1" - ], - [ - "gene_synonym", - "ptr" - ], - [ - "gene_synonym", - "ptrA" - ] - ], - "dna_sequence": "ATGCCCCGCAGCACCTGGTTCAAAGCATTATTGTTGTTAGTTGCCCTTTGGGCACCCTTAAGTCAGGCAGAAACGGGATGGCAGCCGATTCAGGAAACCATCCGTAAAAGTGATAAAGATAACCGCCAGTATCAGGCTATACGTCTGGATAACGGTATGGTGGTCTTGCTGGTTTCTGATCCGCAGGCAGTTAAATCGCTCTCGGCGCTGGTGGTGCCCGTTGGGTCGCTGGAAGATCCCGAGGCGTACCAGGGGCTGGCACATTACCTTGAACATATGAGTCTGATGGGGTCGAAAAAGTACCCGCAGGCTGACAGTCTGGCCGAATATCTCAAAATGCACGGCGGTAGTCACAATGCCAGCACTGCGCCGTATCGCACGGCTTTCTATCTGGAAGTTGAGAACGACGCCTTGCCTGGTGCGGTAGACCGCCTGGCCGATGCTATTGCTGAACCTTTGCTCGACAAGAAATATGCCGAACGTGAGCGTAATGCGGTGAACGCTGAATTAACCATGGCGCGTACGCGTGACGGGATGCGCATGGCACAGGTCAGCGCAGAAACCATTAACCCGGCACACCCCGGTTCAAAGTTTTCTGGTGGTAACCTCGAAACTTTAAGCGACAAACCTGGTAATCCGGTGCAGCAGGCGCTGAAAGATTTCCACGAGAAGTACTATTCCGCCAATTTGATGAAGGCGGTTATTTACAGTAATAAACCGCTGCCGGAGTTGGCAAAAATGGCGGCGGACACCTTTGGTCGCGTGCCGAACAAAGAGAGCAAAAAACCGGAAATCACCGTGCCGGTAGTCACCGACGCGCAAAAGGGCATTATCATTCATTACGTCCCTGCGCTGCCGCGTAAAGTGTTGCGCGTTGAGTTTCGCATCGATAACAACTCAGCGAAGTTCCGTAGTAAAACCGATGAATTGATTACCTATCTGATTGGCAATCGCAGCCCAGGTACACTTTCTGACTGGCTGCAAAAGCAGGGATTAGTTGAGGGCATTAGCGCCAACTCCGATCCTATCGTCAACGGCAACAGCGGCGTATTAGCGATCTCTGCGTCTTTAACCGATAAAGGCCTGGCTAATCGCGATCAGGTTGTGGCGGCAATTTTTAGCTATCTCAATCTGTTACGTGAAAAAGGCATTGATAAACAATACTTCGATGAACTGGCGAATGTGCTGGATATCGACTTCCGTTATCCGTCGATCACCCGTGATATGGATTACGTCGAATGGCTGGCAGATACCATGATTCGCGTTCCTGTTGAGCATACGCTGGATGCAGTCAATATTGCCGATCGGTACGATGCTAAAGCAGTAAAGGAACGTCTGGCGATGATGACGCCGCAGAATGCGCGTATCTGGTATATCAGCCCGAAAGAGCCGCACAACAAAACGGCTTACTTTGTCGATGCGCCGTATCAGGTCGATAAAATCAGCGCACAAACTTTCGCCGACTGGCAGAAAAAAGCCGCCGACATTGCGCTCTCTTTGCCAGAGCTTAACCCTTATATTCCTGATGATTTCTCGCTGATTAAGTCAGAGAAGAAATACGACCATCCAGAGCTGATTGTTGATGAGTCGAATCTGCGCGTGGTGTATGCGCCAAGCCGTTATTTTGCCAGCGAGCCCAAAGCTGATGTCAGCCTGATTTTGCGTAATCCGAAAGCCATGGACAGCGCCCGCAATCAGGTGATGTTTGCGCTCAATGATTATCTCGCAGGGCTGGCGCTTGATCAGTTAAGCAACCAGGCGTCGGTTGGTGGCATAAGTTTTTCCACCAACGCTAACAACGGCCTTATGGTTAATGCTAATGGTTACACCCAGCGTCTGCCGCAGCTGTTCCAGGCATTGCTCGAGGGGTACTTTAGCTATACCGCTACGGAAGATCAGCTTGAGCAGGCGAAGTCCTGGTATAACCAGATGATGGATTCCGCAGAAAAGGGTAAAGCGTTTGAGCAGGCGATTATGCCCGCGCAGATGCTCTCGCAAGTGCCGTACTTCTCGCGAGATGAACGGCGTAAAATTTTGCCCTCCATTACGTTGAAAGAGGTGCTGGCCTATCGCGACGCCTTAAAATCAGGGGCTCGACCAGAGTTTATGGTTATCGGCAACATGACCGAGGCCCAGGCAACAACGCTGGCACGCGATGTGCAAAAACAGTTGGGCGCTGATGGTTCAGAGTGGTGTCGAAACAAAGATGTAGTGGTCGATAAAAAACAATCCGTCATCTTTGAAAAAGCCGGTAACAGCACCGACTCCGCACTGGCAGCGGTATTTGTACCGACTGGCTACGATGAATACACCAGCTCAGCCTATAGCTCTCTGTTGGGGCAGATCGTACAGCCGTGGTTCTACAATCAGTTGCGTACCGAAGAACAATTGGGCTATGCCGTGTTTGCGTTTCCAATGAGCGTGGGGCGTCAGTGGGGCATGGGCTTCCTTTTGCAAAGCAATGATAAACAGCCTTCATTCTTGTGGGAGCGTTACAAGGCGTTTTTCCCAACCGCAGAGGCAAAATTGCGAGCGATGAAGCCAGATGAGTTTGCGCAAATCCAGCAGGCGGTAATTACCCAGATGCTGCAGGCACCGCAAACGCTCGGCGAAGAAGCATCGAAGTTAAGTAAAGATTTCGATCGCGGCAATATGCGCTTCGATTCGCGTGATAAAATCGTGGCCCAGATAAAACTGCTGACGCCGCAAAAACTTGCTGATTTCTTCCATCAGGCGGTGGTCGAGCCGCAAGGCATGGCTATTCTGTCGCAGATTTCCGGCAGCCAGAACGGGAAAGCCGAATATGTACACCCTGAAGGCTGGAAAGTGTGGGAGAACGTCAGCGCGTTGCAGCAAACAATGCCCCTGATGAGTGAAAAGAATGAGTGA", - "dna_sequence_length": 2889, - "functions": [ - "protease III" - ], - "id": "CDS_2781", - "location": [ - [ - "NC_000913", - 2958884, - "-", - 2889 - ] - ], - "md5": "e20c28761a88f41e9abdbca4f0b3b9ca", - "parent_gene": "", - "protein_md5": "9617c6dfd595a41a4f9436331fa5191f", - "protein_translation": "MPRSTWFKALLLLVALWAPLSQAETGWQPIQETIRKSDKDNRQYQAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKGIIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEPHNKTAYFVDAPYQVDKISAQTFADWQKKAADIALSLPELNPYIPDDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEWCRNKDVVVDKKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVVEPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEKNE", - "protein_translation_length": 962, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2790" - ], - [ - "gene_synonym", - "EcoGene:EG10825" - ], - [ - "gene_synonym", - "NP_417299.1" - ], - [ - "gene_synonym", - "recC" - ], - [ - "gene_synonym", - "b2822" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07648" - ], - [ - "gene_synonym", - "ASAP:ABE-0009255" - ], - [ - "gene_synonym", - "GeneID:947294" - ], - [ - "gene_synonym", - "GI:16130726" - ], - [ - "gene_synonym", - "ECK2818" - ] - ], - "dna_sequence": "ATGTTAAGGGTCTACCATTCCAATCGTCTGGACGTGCTGGAAGCGTTGATGGAGTTTATTGTCGAACGCGAACGGCTGGACGATCCTTTCGAACCAGAGATGATTCTGGTGCAAAGTACCGGTATGGCACAGTGGCTGCAAATGACCCTGTCGCAAAAGTTTGGTATTGCGGCAAACATTGATTTTCCGCTGCCAGCGAGCTTTATCTGGGATATGTTCGTCCGGGTGTTACCGGAAATCCCCAAAGAGAGCGCCTTTAACAAACAGAGCATGAGCTGGAAACTGATGACTCTGCTGCCGCAATTGCTGGAGCGCGAAGACTTTACCCTGTTGCGGCATTATCTGACTGACGATAGCGACAAGCGAAAACTGTTCCAGCTTTCCTCAAAAGCGGCGGACCTGTTTGACCAGTATCTGGTCTATCGTCCGGACTGGCTGGCACAGTGGGAAACAGGACATTTGGTTGAAGGGCTGGGAGAAGCACAGGCCTGGCAAGCCCCGTTGTGGAAGGCGCTGGTGGAATATACCCATCAACTCGGGCAACCGCGCTGGCACCGCGCCAATCTCTATCAGCGCTTTATCGAAACGCTGGAGTCCGCGACGACCTGCCCGCCGGGGTTACCTTCGCGCGTCTTTATATGCGGTATTTCCGCGTTACCGCCTGTTTATCTCCAGGCGCTACAGGCGCTGGGTAAACATATTGAAATCCATCTCCTGTTTACCAACCCCTGCCGTTATTACTGGGGCGATATTAAAGATCCTGCTTATCTGGCGAAACTGCTGACCCGTCAGCGTCGACACAGTTTTGAAGATCGCGAATTGCCGCTATTTCGTGATAGCGAAAATGCCGGGCAGCTCTTTAACAGCGATGGTGAACAGGATGTCGGCAACCCGCTGCTGGCTTCATGGGGTAAGCTTGGGCGCGACTACATTTATCTCCTTTCTGACCTGGAGAGCAGCCAGGAGCTGGACGCCTTTGTCGATGTCACGCCAGATAACCTGCTGCATAACATTCAGTCTGACATTCTGGAACTGGAAAACCGCGCCGTTGCTGGTGTGAACATCGAAGAGTTTTCCCGTAGCGATAACAAACGCCCGCTTGATCCACTGGATAGCAGTATCACCTTCCACGTTTGCCATAGCCCGCAGCGTGAAGTTGAAGTTTTACACGATCGCCTGCTGGCGATGCTGGAGGAAGACCCGACACTTACTCCGCGCGACATCATCGTGATGGTGGCTGATATCGACAGCTACAGTCCGTTTATTCAGGCTGTGTTTGGTAGCGCACCTGCGGATCGTTACCTACCTTACGCCATTTCCGACCGTCGTGCGCGGCAGTCACATCCGGTACTGGAAGCGTTTATCAGCCTGTTATCACTGCCTGACAGTCGTTTTGTGTCAGAGGATGTGCTGGCGTTGCTGGATGTGCCGGTGCTGGCGGCGCGGTTTGACATCACCGAAGAAGGGCTGCGTTATTTACGCCAGTGGGTCAACGAATCCGGCATTCGTTGGGGCATAGATGACGACAACGTTCGCGAGCTGGAACTCCCCGCCACCGGACAACACACCTGGCGATTTGGCCTGACGCGTATGTTGTTGGGCTACGCGATGGAGAGCGCGCAGGGCGAGTGGCAATCGGTTCTACCTTATGATGAATCGAGCGGCTTAATTGCAGAACTGGTGGGGCATCTGGCTTCACTGCTAATGCAGCTAAACATCTGGCGTCGCGGGCTGGCACAGGAGCGTCCGCTGGAAGAGTGGTTGCCGGTTTGTCGCGATATGCTCAACGCCTTCTTCCTGCCGGATGCGGAAACCGAAGCGGCGATGACGCTGATCGAACAACAATGGCAGGCGATTATCGCCGAAGGTTTAGGTGCGCAGTATGGCGACGCGGTGCCGCTGTCACTATTGCGTGATGAACTGGCACAGCGTCTGGATCAAGAACGTATCAGCCAGCGTTTTCTCGCCGGACCGGTTAACATTTGTACTCTGATGCCAATGCGTTCAATTCCGTTCAAAGTGGTTTGCCTGCTGGGAATGAACGACGGCGTTTATCCACGTCAGCTTGCGCCATTGGGCTTTGACCTGATGAGCCAGAAACCGAAGCGTGGCGACCGTAGCCGTCGCGATGACGACCGCTATCTGTTCCTGGAAGCGTTAATTTCCGCGCAGCAAAAACTCTATATCAGCTATATCGGTCGTTCCATTCAGGATAACAGTGAGCGTTTCCCGTCGGTACTGGTGCAGGAACTGATCGACTACATCGGGCAAAGTCATTATCTACCGGGCGATGAAGCGCTCAACTGTGATGAAAGCGAGGCAAGGGTAAAAGCGCATCTTACTTGCCTCCATACCCGGATGCCGTTTGATCCACAAAACTACCAGCCAGGCGAACGACAAAGCTATGCTCGTGAATGGCTACCTGCGGCCAGCCAGGCTGGTAAAGCACATTCTGAATTTGTTCAGCCGCTGCCGTTTACCTTACCGGAAACCGTGCCGCTGGAAACGCTACAACGATTCTGGGCACATCCGGTGCGGGCATTTTTCCAGATGCGTTTGCAGGTGAACTTCCGTACTGAAGACAGCGAAATCCCCGACACCGAGCCATTTATTCTGGAAGGACTTAGCCGTTATCAAATCAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGCTTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAGAGTCATTGCCTGTCGCCAGCCGGGGCAGAGTATGGAAATTGATCTCGCCTGCAACGGTGTGCAGATAACTGGCTGGTTGCCGCAGGTGCAGCCGGATGGCCTGTTGCGCTGGCGTCCCTCTTTATTAAGTGTGGCCCAGGGAATGCAACTTTGGCTGGAACACCTTGTCTACTGTGCCAGCGGTGGTAATGGTGAAAGTCGCCTTTTTCTACGCAAAGACGGCGAGTGGCGTTTTCCGCCGCTTGCAGCCGAACAGGCTTTGCATTACCTCTCACAACTGATTGAGGGGTATCGTGAAGGAATGTCCGCGCCATTGCTGGTGTTACCTGAAAGTGGCGGCGCGTGGCTAAAAACCTGTTATGACGCGCAAAACGATGCCATGCTGGATGACGATTCCACGTTGCAAAAAGCCCGTACGAAATTCCTTCAGGCTTACGAAGGCAACATGATGGTGCGTGGCGAAGGTGATGATATCTGGTATCAAAGGCTCTGGCGGCAATTAACACCAGAGACAATGGAGGCCATCGTTGAACAGTCGCAACGTTTCCTGTTACCGCTGTTTCGCTTTAATCAGTCATGA", - "dna_sequence_length": 3369, - "functions": [ - "exonuclease V (RecBCD complex), gamma chain" - ], - "id": "CDS_2782", - "location": [ - [ - "NC_000913", - 2962428, - "-", - 3369 - ] - ], - "md5": "db1861c2faab41c1aa37ee9024f113d3", - "parent_gene": "", - "protein_md5": "ebd54a341452c559eeb434dc78c4dc05", - "protein_translation": "MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQLLEREDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPDWLAQWETGHLVEGLGEAQAWQAPLWKALVEYTHQLGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISALPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPLFRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNLLHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDRLLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPVLEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRQWVNESGIRWGIDDDNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGLGAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGRSIQDNSERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGERQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVNFRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGEIFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLLSVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREGMSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDDIWYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS", - "protein_translation_length": 1122, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2791" - ], - [ - "gene_synonym", - "GeneID:945797" - ], - [ - "gene_synonym", - "ECK2819" - ], - [ - "gene_synonym", - "ygdA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08372" - ], - [ - "gene_synonym", - "ppdC" - ], - [ - "gene_synonym", - "b2823" - ], - [ - "gene_synonym", - "ASAP:ABE-0009257" - ], - [ - "gene_synonym", - "NP_417300.1" - ], - [ - "gene_synonym", - "GI:16130727" - ], - [ - "gene_synonym", - "EcoGene:EG11154" - ] - ], - "dna_sequence": "ATGTCAGCTTCCCTGAAGAATCAACAAGGCTTTAGCCTGCCGGAGGTAATGTTGGCGATGGTGTTGATGGTGATGATTGTCACTGCGTTATCGGGTTTCCAGCGAACATTAATGAACAGTCTTGCCAGCAGAAACCAGTACCAACAGCTCTGGCGGCATGGCTGGCAGCAAACGCAACTGCGCGCGATTTCGCCACCTGCCAACTGGCAGGTCAACCGAATGCAGACATCGCAGGCGGGATGTGTCAGCATCAGCGTTACGCTAGTTTCACCCGGGGGCAGAGAAGGCGAGATGACCCGCCTGCATTGCCCGAATCGTCAGTAG", - "dna_sequence_length": 324, - "functions": [ - "putative prepilin peptidase-dependent protein" - ], 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"GTGAACCGCGAAAAGGGTGTTTCGTCACTGGCTCTGGTCCTGATGCTGCTGGTTTTGGGTAGTTTGCTATTACAAGGAATGAGCCAACAGGATCGCAGTTTTGCCTCTCGCGTGAGCATGGAAAGTCAGTCATTGCGCCGCCAGGCCATCGTTCAGTCGGCGCTGGCGTGGGGAAAAATGCACTGCTGGCAGACGCAGCCAGCAGTTCAGTGCTCGCAGTACGCTGAAACCGATGCCCAGGTTTGTTTGCGTTTACTGGCAGATAATGAAGCCTTATTGATTGCCGGTTATGAAGGCGTTTCGTTGTGGCGAACAGGCGAAGTCATTGATGGAAACATTGTTTTTTCGCCACGCGGCTGGAGCGATTTTTGTCCGCTGAAAGAGAGGGCGTTATGTCAGCTTCCCTGA", - "dna_sequence_length": 408, - "functions": [ - "DUF2509 family protein" - ], - "id": "CDS_2784", - "location": [ - [ - "NC_000913", - 2963156, - "-", - 408 - ] - ], - "md5": "8be29649910dab946a744600fefdf5d9", - "parent_gene": "", - "protein_md5": "f48a80eba1d67addf0752e776d64f4b1", - "protein_translation": "MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQSLRRQAIVQSALAWGKMHCWQTQPAVQCSQYAETDAQVCLRLLADNEALLIAGYEGVSLWRTGEVIDGNIVFSPRGWSDFCPLKERALCQLP", - "protein_translation_length": 135, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417302.1" - ], - [ - "gene_synonym", - "ECK2821" - ], - [ - "gene_synonym", - "ygdC" - ], - [ - "gene_synonym", - "ppdB" - ], - [ - "gene_synonym", - "GeneID:948985" - ], - [ - "gene_synonym", - "ASAP:ABE-0009263" - ], - [ - "gene_synonym", - "GI:16130729" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08371" - ], - [ - "gene_synonym", - "JW5451" - ], - [ - "gene_synonym", - "b2825" - ], - [ - "gene_synonym", - "EcoGene:EG11156" - ] - ], - "dna_sequence": "ATGCCTGTAAAAGAGCAAGGTTTTTCTCTGCTGGAAGTGTTGATTGCTATGGCGATCAGTAGCGTATTGTTGCTGGGGGCGGCACGCTTTCTGCCTGCGTTACAGCGTGAAAGTTTAACGAGCACCCGTAAGCTGGCGCTGGAAGATGAAATCTGGCTGCGGGTATTTACCGTCGCGAAGCATCTCCAGAGGGCGGGTTATTGTCATGGCATCTGTACCGGCGAAGGGCTGGAAATTGTCGGACAGGGTGACTGTGTCATTGTGCAGTGGGATGCGAACAGTAACGGTATCTGGGATCGCGAACCGGTAAAAGAGTCCGACCAGATTGGATTTCGTCTGAAGGAGCATGTGCTGGAAACGCTACGCGGTGCGACATCCTGTGAAGGTAAGGGCTGGGATAAAGTCACTAATCCGGATGCCATCATTATCGACACTTTTCAGGTCGTACGTCAGGATGTCAGCGGCTTCTCGCCGGTGTTGACGGTTAATATGCGTGCTGCCAGTAAGTCTGAACCGCAAACCGTGGTGAATGCCAGCTATAGCGTGACAGGATTCAACCTGTGA", - "dna_sequence_length": 564, - "functions": [ - "putative prepilin peptidase-dependent protein" - ], - "id": "CDS_2785", - "location": [ - [ - "NC_000913", - 2963716, - "-", - 564 - ] - ], - "md5": "78d6a0ff625ff2fd7a0450626c239a88", - "parent_gene": "", - "protein_md5": "3efdf52fe3cd187c36223c2fe632d255", - "protein_translation": "MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRKLALEDEIWLRVFTVAKHLQRAGYCHGICTGEGLEIVGQGDCVIVQWDANSNGIWDREPVKESDQIGFRLKEHVLETLRGATSCEGKGWDKVTNPDAIIIDTFQVVRQDVSGFSPVLTVNMRAASKSEPQTVVNASYSVTGFNL", - "protein_translation_length": 187, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2822" - ], - [ - "gene_synonym", - "JW2794" - ], - [ - "gene_synonym", - "ppdA" - ], - [ - "gene_synonym", - "NP_417303.1" - ], - [ - "gene_synonym", - "GI:16130730" - ], - [ - "gene_synonym", - "ASAP:ABE-0009266" - ], - [ - "gene_synonym", - "b2826" - ], - [ - "gene_synonym", - "GeneID:945393" - ], - [ - "gene_synonym", - "EcoGene:EG12081" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33554" - ] - ], - "dna_sequence": "ATGAAAACACAACGTGGTTATACGCTGATTGAAACGCTGGTCGCGATGCTGATTTTGGTCATGCTAAGCGCAAGTGGACTCTATGGCTGGCAATACTGGCAGCAGTCGCAACGGCTATGGCAAACCGCCAGCCAGGCGCGGGACTATTTGCTCTATTTACGTGAAGATGCCAACTGGCATAACCGCGACCACAGTATCAGCGTTATCAGGGAGGGGACGTTATGGTGCCTTGTGAGTTCCGCTGCTGGGGCCAATACCTGTCATGGCAGTTCACCATTGGTCTTTGTGCCACGCTGGCCCGAAGTCGAAATGAGCGACCTGACACCTTCGCTTGCTTTCTTTGGCCTGCGCAATACCGCATGGGCCGGGCATATTCGCTTCAAAAACTCAACGGGCGAGTGGTGGCTGGTGGTTTCGCCGTGGGGAAGACTCCGGCTTTGTCAGCAAGGAGAAACAGAAGGATGCCTGTAA", - "dna_sequence_length": 471, - "functions": [ - "putative prepilin peptidase-dependent protein" - ], - "id": "CDS_2786", - "location": [ - [ - "NC_000913", - 2964177, - "-", - 471 - ] - ], - "md5": "824293cd4cf540dfd5ecb795e2111c21", - "parent_gene": "", - "protein_md5": "a4c23d26076794fa60d262ffc28d8875", - "protein_translation": "MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYLLYLREDANWHNRDHSISVIREGTLWCLVSSAAGANTCHGSSPLVFVPRWPEVEMSDLTPSLAFFGLRNTAWAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL", - "protein_translation_length": 156, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2823" - ], - [ - "gene_synonym", - "JW2795" - ], - [ - "gene_synonym", - "b2827" - ], - [ - "gene_synonym", - "thyA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A884" - ], - [ - "gene_synonym", - "EcoGene:EG11002" - ], - [ - "gene_synonym", - "GI:16130731" - ], - [ - "gene_synonym", - "GeneID:949035" - ], - [ - "gene_synonym", - "ASAP:ABE-0009268" - ], - [ - "gene_synonym", - "NP_417304.1" - ] - ], - "dna_sequence": "ATGAAACAGTATTTAGAACTGATGCAAAAAGTGCTCGACGAAGGCACACAGAAAAACGACCGTACCGGAACCGGAACGCTTTCCATTTTTGGTCATCAGATGCGTTTTAACCTGCAAGATGGATTCCCGCTGGTGACAACTAAACGTTGCCACCTGCGTTCCATCATCCATGAACTGCTGTGGTTTCTGCAGGGCGACACTAACATTGCTTATCTACACGAAAACAATGTCACCATCTGGGACGAATGGGCCGATGAAAACGGCGACCTCGGGCCAGTGTATGGTAAACAGTGGCGCGCCTGGCCAACGCCAGATGGTCGTCATATTGACCAGATCACTACGGTACTGAACCAGCTGAAAAACGACCCGGATTCGCGCCGCATTATTGTTTCAGCGTGGAACGTAGGCGAACTGGATAAAATGGCGCTGGCACCGTGCCATGCATTCTTCCAGTTCTATGTGGCAGACGGCAAACTCTCTTGCCAGCTTTATCAGCGCTCCTGTGACGTCTTCCTCGGCCTGCCGTTCAACATTGCCAGCTACGCGTTATTGGTGCATATGATGGCGCAGCAGTGCGATCTGGAAGTGGGTGATTTTGTCTGGACCGGTGGCGACACGCATCTGTACAGCAACCATATGGATCAAACTCATCTGCAATTAAGCCGCGAACCGCGTCCGCTGCCGAAGTTGATTATCAAACGTAAACCCGAATCCATCTTCGACTACCGTTTCGAAGACTTTGAGATTGAAGGCTACGATCCGCATCCGGGCATTAAAGCGCCGGTGGCTATCTAA", - "dna_sequence_length": 795, - "functions": [ - "thymidylate synthetase" - ], - "id": "CDS_2787", - "location": [ - [ - "NC_000913", - 2965155, - "-", - 795 - ] - ], - "md5": "b77c2a27fa2946992b13f1c2cae3163c", - "parent_gene": "", - "protein_md5": "188a9c3fc4031be2e94cdf304e4a6cb2", - "protein_translation": "MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI", - "protein_translation_length": 264, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009270" - ], - [ - "gene_synonym", - "ECK2824" - ], - [ - "gene_synonym", - "JW2796" - ], - [ - "gene_synonym", - "b2828" - ], - [ - "gene_synonym", - "EcoGene:EG12128" - ], - [ - "gene_synonym", - "GI:16130732" - ], - [ - "gene_synonym", - "GeneID:947303" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60955" - ], - [ - "gene_synonym", - "umpA" - ], - [ - "gene_synonym", - "NP_417305.1" - ], - [ - "gene_synonym", - "lgt" - ] - ], - "dna_sequence": "ATGACCAGTAGCTATCTGCATTTTCCGGAGTTTGATCCGGTCATTTTCTCAATAGGACCCGTGGCGCTTCACTGGTACGGCCTGATGTATCTGGTGGGTTTCATTTTTGCAATGTGGCTGGCAACACGACGGGCGAATCGTCCGGGCAGCGGCTGGACCAAAAATGAAGTTGAAAACTTACTCTATGCGGGCTTCCTCGGCGTCTTCCTCGGGGGACGTATTGGTTATGTTCTGTTCTACAATTTCCCGCAGTTTATGGCCGATCCGCTGTATCTGTTCCGTGTCTGGGACGGCGGCATGTCTTTCCACGGCGGCCTGATTGGCGTTATCGTGGTGATGATTATCTTCGCCCGCCGTACTAAACGTTCCTTCTTCCAGGTCTCTGATTTTATCGCACCACTCATTCCGTTTGGTCTTGGTGCCGGGCGTCTGGGCAACTTTATTAACGGTGAATTGTGGGGCCGCGTTGACCCGAACTTCCCGTTTGCCATGCTGTTCCCTGGCTCCCGTACAGAAGATATTTTGCTGCTGCAAACCAACCCGCAGTGGCAATCCATTTTCGACACTTACGGTGTGCTGCCGCGCCACCCATCACAGCTTTACGAGCTGCTGCTGGAAGGTGTGGTGCTGTTTATTATCCTCAACCTGTATATTCGTAAACCACGCCCAATGGGAGCTGTCTCAGGTTTGTTCCTGATTGGTTACGGCGCGTTTCGCATCATTGTTGAGTTTTTCCGCCAGCCCGACGCGCAGTTTACCGGTGCCTGGGTGCAGTACATCAGCATGGGGCAAATTCTTTCCATCCCGATGATTGTCGCGGGTGTGATCATGATGGTCTGGGCATATCGTCGCAGCCCACAGCAACACGTTTCCTGA", - "dna_sequence_length": 876, - "functions": [ - "phosphatidylglycerol-prolipoprotein diacylglyceryl transferase" - ], - "id": "CDS_2788", - "location": [ - [ - "NC_000913", - 2966037, - "-", - 876 - ] - ], - "md5": "ae29760c7c5ad1fd4d1934f285ee793d", - "parent_gene": "", - "protein_md5": "9e23702219d06826b81dbc87632ba4fd", - "protein_translation": "MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRRANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSFHGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNFPFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYIRKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVIMMVWAYRRSPQQHVS", - "protein_translation_length": 291, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygdF" - ], - [ - "gene_synonym", - "EcoGene:EG12188" - ], - [ - "gene_synonym", - "ECK2825" - ], - [ - "gene_synonym", - "JW2797" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37177" - ], - [ - "gene_synonym", - "ptsP" - ], - [ - "gene_synonym", - "ygdO" - ], - [ - "gene_synonym", - "NP_417306.1" - ], - [ - "gene_synonym", - "GI:16130733" - ], - [ - "gene_synonym", - "GeneID:947301" - ], - [ - "gene_synonym", - "ASAP:ABE-0009274" - ], - [ - "gene_synonym", - "b2829" - ] - ], - "dna_sequence": "ATGCTCACTCGCCTGCGCGAAATAGTCGAAAAGGTAGCCAGCGCACCACGCCTGAATGAGGCGTTAAATATTCTGGTTACCGACATCTGTCTTGCGATGGATACCGAGGTCTGTTCGGTCTACCTGGCCGATCATGATCGACGTTGTTACTACCTGATGGCGACCCGGGGGCTGAAAAAACCACGCGGTCGCACTGTAACGCTCGCGTTTGATGAAGGGATCGTCGGCCTGGTTGGCAGGCTGGCGGAACCGATAAACCTTGCAGATGCGCAAAAGCACCCCAGCTTCAAATACATCCCCTCCGTAAAAGAAGAACGTTTCCGCGCGTTTTTAGGCGTACCAATTATTCAACGTCGCCAGTTGCTTGGTGTACTGGTGGTACAGCAACGAGAGTTGCGCCAGTATGACGAAAGTGAAGAATCCTTCCTGGTGACGCTTGCCACCCAGATGGCAGCTATTCTTTCTCAGTCGCAGTTGACTGCCTTGTTTGGGCAATATCGCCAGACGCGAATCCGCGCATTACCGGCAGCACCTGGTGTGGCGATTGCCGAAGGCTGGCAGGATGCCACGTTACCTTTAATGGAACAGGTGTATCAGGCATCAACGCTGGATCCGGCTCTGGAACGCGAACGACTGACCGGGGCGCTGGAAGAAGCGGCAAACGAGTTTCGCCGCTACAGCAAACGCTTTGCCGCCGGTGCACAAAAAGAAACGGCGGCTATTTTCGATCTTTACTCGCACCTGCTTTCGGACACCCGGCTGCGTCGCGAATTGTTTGCCGAGGTTGATAAAGGCTCGGTGGCAGAGTGGGCGGTAAAAACGGTCATTGAAAAATTTGCCGAACAGTTTGCCGCGCTAAGTGATAACTATCTCAAAGAGCGGGCTGGCGATTTACGTGCGCTGGGTCAGCGATTGCTGTTTCATCTTGATGACGCTAATCAAGGGCCGAACGCCTGGCCGGAACGTTTCATTCTGGTGGCAGATGAACTGTCAGCGACAACGCTTGCTGAGCTGCCCCAGGATCGCTTAGTCGGTGTTGTCGTGCGAGATGGCGCAGCCAACTCCCATGCTGCGATCATGGTACGTGCGCTGGGGATCCCTACCGTGATGGGCGCGGATATTCAGCCTTCGGTGCTGCATCGTAGGACGCTGATCGTTGATGGCTATCGCGGTGAATTGCTGGTCGATCCGGAGCCGGTACTGCTGCAAGAATATCAGCGGCTAATTAGTGAAGAGATTGAGCTTAGCCGTCTGGCGGAAGATGACGTCAATTTACCCGCGCAGTTAAAAAGCGGTGAGCGTATAAAAGTCATGCTCAATGCTGGTTTAAGCCCGGAACATGAAGAAAAACTGGGCAGCCGTATTGATGGCATCGGTCTTTATCGCACTGAAATCCCATTCATGCTGCAAAGTGGTTTCCCGTCGGAAGAAGAACAGGTGGCGCAGTATCAGGGGATGCTGCAAATGTTCAATGATAAACCCGTCACCTTGCGTACGCTGGATGTCGGAGCAGATAAGCAGCTGCCTTACATGCCGATCAGCGAAGAGAATCCATGCCTGGGTTGGCGTGGGATTCGCATTACGCTCGATCAGCCGGAGATCTTCTTGATCCAGGTGCGGGCGATGCTGCGTGCTAATGCCGCTACGGGCAACCTGAATATTCTGTTGCCGATGGTCACAAGCCTCGATGAAGTTGATGAAGCACGCCGCCTGATTGAACGTGCCGGACGTGAAGTCGAGGAGATGATCGGTTACGAAATTCCCAAACCACGTATCGGCATCATGCTGGAAGTGCCGTCAATGGTATTTATGCTGCCGCATCTGGCAAAGCGGGTCGATTTCATCTCTGTTGGCACCAACGATCTGACTCAATACATTCTGGCCGTTGATCGCAACAATACCCGGGTGGCGAACATTTATGACAGTCTTCATCCTGCAATGTTACGAGCTCTGGCGATGATCGCCCGGGAAGCGGAAATACATGGAATCGATCTCCGTTTGTGCGGTGAAATGGCGGGCGATCCCATGTGCGTGGCAATCCTCATTGGGCTTGGGTATCGCCATCTGTCTATGAACGGACGTTCTGTAGCGCGGGCAAAATACCTGCTGCGGCGCATTGATTATGCCGAAGCAGAAAATCTTGCGCAGCGTAGTCTGGAAGCGCAACTGGCGACCGAAGTTCGCCATCAGGTTGCAGCCTTTATGGAGCGTCGCGGCATGGGCGGGCTGATTCGCGGAGGGTTATAG", 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"MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLADHDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSVKEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLTALFGQYRQTRIRALPAAPGVAIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEEAANEFRRYSKRFAAGAQKETAAIFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVIEKFAEQFAALSDNYLKERAGDLRALGQRLLFHLDDANQGPNAWPERFILVADELSATTLAELPQDRLVGVVVRDGAANSHAAIMVRALGIPTVMGADIQPSVLHRRTLIVDGYRGELLVDPEPVLLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEKLGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLNILLPMVTSLDEVDEARRLIERAGREVEEMIGYEIPKPRIGIMLEVPSMVFMLPHLAKRVDFISVGTNDLTQYILAVDRNNTRVANIYDSLHPAMLRALAMIAREAEIHGIDLRLCGEMAGDPMCVAILIGLGYRHLSMNGRSVARAKYLLRRIDYAEAENLAQRSLEAQLATEVRHQVAAFMERRGMGGLIRGGL", - "protein_translation_length": 748, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13091" - ], - [ - "gene_synonym", - "ASAP:ABE-0009276" - ], - [ - "gene_synonym", - "ECK2826" - ], - [ - "gene_synonym", - "nudH" - ], - 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"location": [ - [ - "NC_000913", - 2968977, - "-", - 531 - ] - ], - "md5": "82a883d420bd87a6544a9be3593bc372", - "parent_gene": "", - "protein_md5": "176d1a8220b81f2b982a567b39c44cc4", - "protein_translation": "MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQENTPKPQNASAYRRKRG", - "protein_translation_length": 176, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06722" - ], - [ - "gene_synonym", - "ECK2827" - ], - [ - "gene_synonym", - "JW2799" - ], - [ - "gene_synonym", - "b2831" - ], - [ - "gene_synonym", - "mutH" - ], - [ - "gene_synonym", - "mutR" - ], - [ - "gene_synonym", - "EcoGene:EG10624" - ], - [ - "gene_synonym", - "prv" - ], - [ - "gene_synonym", - "GeneID:947299" - ], - [ - "gene_synonym", - "GI:16130735" - ], - [ - "gene_synonym", - "NP_417308.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009287" - ] - ], - "dna_sequence": "ATGTCCCAACCTCGCCCACTGCTCTCTCCTCCCGAAACTGAAGAACAGTTGTTAGCGCAAGCACAGCAACTTTCTGGTTATACATTGGGAGAACTGGCGGCACTTGTCGGGCTGGTTACGCCAGAGAATTTAAAACGCGATAAAGGCTGGATTGGCGTGTTACTGGAGATCTGGCTAGGTGCCAGCGCAGGGAGTAAACCTGAGCAAGATTTTGCTGCTCTGGGCGTGGAACTTAAAACTATCCCTGTGGATAGTCTTGGTCGTCCGCTGGAAACAACATTCGTTTGTGTTGCCCCGTTAACGGGCAATAGCGGGGTGACCTGGGAAACCAGCCACGTGCGCCACAAACTCAAACGCGTACTGTGGATACCGGTTGAAGGCGAGCGCAGCATCCCGCTGGCGCAGCGTCGCGTTGGATCACCGTTGCTGTGGAGCCCGAATGAAGAGGAAGACCGGCAGCTACGCGAAGACTGGGAAGAATTAATGGATATGATTGTTCTCGGTCAGGTTGAGCGGATTACCGCTCGTCACGGGGAGTATTTACAGATACGACCGAAAGCAGCGAATGCGAAAGCGCTTACCGAAGCCATTGGTGCCCGGGGCGAACGGATTCTGACGCTGCCACGCGGCTTTTATTTGAAGAAGAATTTCACCAGTGCACTACTGGCCCGTCATTTTCTGATCCAGTAG", - "dna_sequence_length": 690, - "functions": [ - "methyl-directed mismatch repair protein" - ], - "id": "CDS_2791", - "location": [ - [ - "NC_000913", - 2969662, - "+", - 690 - ] - ], - "md5": "7ca50a900b8a02292a871127a6982d9d", - "parent_gene": "", - "protein_md5": "906e95a9b8e65d3c6633793cd3ad14c5", - "protein_translation": "MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALVGLVTPENLKRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTGNSGVTWETSHVRHKLKRVLWIPVEGERSIPLAQRRVGSPLLWSPNEEEDRQLREDWEELMDMIVLGQVERITARHGEYLQIRPKAANAKALTEAIGARGERILTLPRGFYLKKNFTSALLARHFLIQ", - "protein_translation_length": 229, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13092" - ], - [ - "gene_synonym", - "NP_417309.1" - ], - [ - "gene_synonym", - "ECK2828" - ], - [ - "gene_synonym", - "b2832" - ], - [ - "gene_synonym", - "GI:16130736" - ], - [ - "gene_synonym", - "ygdQ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67127" - ], - [ - "gene_synonym", - "GeneID:947295" - ], - [ - "gene_synonym", - "ASAP:ABE-0009290" - ], - [ - "gene_synonym", - "JW2800" - ] - ], - "dna_sequence": "ATGTTATTTGCATGGATAACCGATCCTAACGCCTGGCTTGCGCTCGGTACGCTGACGCTGCTGGAGATCGTTCTTGGGATCGACAATATTATTTTCCTTTCTCTGGTGGTGGCAAAGCTTCCCACAGCACAACGTGCTCATGCGCGCCGTCTGGGGTTGGCGGGAGCCATGGTTATGCGTCTGGCGCTGCTGGCATCAATCGCCTGGGTTACGCGCCTGACAAATCCGCTTTTTACAATATTCAGTCAGGAAATTTCTGCCCGTGATTTGATTCTGCTTCTGGGTGGCTTGTTCCTTATCTGGAAAGCCAGCAAGGAAATCCACGAATCCATTGAAGGTGAAGAAGAAGGGCTGAAAACACGCGTTTCATCATTCCTCGGCGCTATCGTGCAGATTATGCTGCTGGATATTATCTTTAGCCTCGACTCGGTGATTACGGCTGTGGGTCTGTCAGATCACCTGTTTATTATGATGGCAGCCGTGGTGATTGCCGTAGGCGTGATGATGTTCGCCGCGCGCTCGATTGGTGATTTTGTCGAACGCCATCCTTCGGTAAAAATGCTGGCGCTCTCTTTCCTGATTCTGGTGGGCTTTACCCTGATTCTGGAAAGTTTCGACATCCACGTACCGAAAGGTTACATCTACTTCGCGATGTTCTTCTCTATTGCGGTTGAAAGCCTCAACTTGATTCGCAACAAAAAGAATCCGCTCTGA", - "dna_sequence_length": 714, - "functions": [ - "UPF0053 family inner membrane protein" - ], - "id": "CDS_2792", - "location": [ - [ - "NC_000913", - 2970420, - "+", - 714 - ] - ], - "md5": "ef41f297d5b2f92aea363ab9e61c8181", - "parent_gene": "", - "protein_md5": "ec3710bdce58c83c1c423dbf2ef76d99", - "protein_translation": "MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRAHARRLGLAGAMVMRLALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWKASKEIHESIEGEEEGLKTRVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARSIGDFVERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAMFFSIAVESLNLIRNKKNPL", - "protein_translation_length": 237, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P65294" - ], - [ - "gene_synonym", - "ECK2829" - ], - [ - "gene_synonym", - "EcoGene:EG13076" - ], - [ - "gene_synonym", - "b2833" - ], - [ - "gene_synonym", - "GeneID:947304" - ], - [ - "gene_synonym", - "GI:16130737" - ], - [ - "gene_synonym", - "ygdR" - ], - [ - "gene_synonym", - "NP_417310.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009293" - ], - [ - "gene_synonym", - "JW2801" - ] - ], - "dna_sequence": "ATGAAAAAATGGGCAGTAATAATTTCTGCAGTCGGACTGGCGTTTGCTGTTTCCGGGTGTTCCAGTGATTACGTCATGGCGACCAAAGATGGCCGTATGATTTTGACCGATGGAAAACCTGAAATTGATGATGATACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAA", - "dna_sequence_length": 219, - "functions": [ - "DUF903 family verified lipoprotein" - ], - "id": "CDS_2793", - "location": [ - [ - "NC_000913", - 2971271, - "+", - 219 - ] - ], - "md5": "76cd04756476dc26cad22bdba28b5b92", - "parent_gene": "", - "protein_md5": "0b48a9e1f99ef82a0bed4c2f17b46097", - "protein_translation": "MKKWAVIISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDDDTGLVSYHDQQGNAMQINRDDVSQIIER", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13093" - ], - [ - "gene_synonym", - "ECK2830" - ], - [ - "gene_synonym", - "tas" - ], - [ - "gene_synonym", - "b2834" - ], - [ - "gene_synonym", - "NP_417311.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009298" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9T4" - ], - [ - "gene_synonym", - "GeneID:947306" - ], - [ - "gene_synonym", - "ygdS" - ], - [ - "gene_synonym", - "GI:16130738" - ], - [ - "gene_synonym", - "JW2802" - ] - ], - "dna_sequence": "ATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGCGAAGCCGACGCCCACGCACAACTCGACTATGCCGTCGCTCAGGGCATTAACCTTATCGACGTTGCCGAAATGTACCCAGTACCTCCGCGCCCCGAAACGCAAGGGTTAACCGAAACCTACGTCGGCAACTGGCTGGCGAAACATGGCAGCCGCGAAAAGTTAATTATCGCCTCCAAAGTGAGCGGACCGTCGCGCAATAATGACAAGGGCATCCGCCCGGATCAGGCGCTGGATCGGAAGAATATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTCGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGATCTGCCGCGTATTGTCACCATTCAGAACCCTTACAGTCTGTTAAACCGCAGTTTTGAAGTAGGTCTGGCAGAAGTCAGCCAGTATGAAGGGGTCGAACTGCTGGCCTATTCGTGCCTGGGTTTCGGCACGCTGACCGGGAAATATCTCAATGGTGCAAAACCCGCTGGCGCACGTAATACGCTCTTTAGTCGGTTCACCCGCTATAGCGGTGAGCAAACGCAAAAAGCCGTCGCGGCGTATGTTGATATCGCCAGACGTCATGGCCTGGACCCTGCTCAGATGGCGCTCGCGTTTGTACGCCGTCAACCGTTTGTTGCCAGCACTCTGCTGGGCGCAACCACGATGGATCAGCTGAAAACTAACATCGAAAGTTTGCATCTGGAGTTAAGCGAAGACGTATTAGCTGAAATTGAAGCGGTGCATCAGGTTTATACTTATCCGGCACCATAA", - "dna_sequence_length": 1041, - "functions": [ - "putative NADP(H)-dependent aldo-keto reductase" - ], - "id": "CDS_2794", - "location": [ - [ - "NC_000913", - 2971597, - "+", - 1041 - ] - ], - "md5": "f84813a87e7b8de4e59d83148569c5b7", - "parent_gene": "", - "protein_md5": "5f414d399df3441134a17c6e35b3487a", - "protein_translation": "MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEIEAVHQVYTYPAP", - "protein_translation_length": 346, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "lplT" - ], - [ - "gene_synonym", - "ECK2831" - ], - [ - "gene_synonym", - "ygeD" - ], - [ - "gene_synonym", - "GI:16130739" - ], - [ - "gene_synonym", - "b2835" - ], - [ - "gene_synonym", - "GeneID:947317" - ], - [ - "gene_synonym", - "EcoGene:EG12455" - ], - [ - "gene_synonym", - "NP_417312.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009300" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39196" - ], - [ - "gene_synonym", - "JW2803" - ] - ], - "dna_sequence": "ATGAGTGAGTCAGTGCACACTAACACTTCGTTGTGGTCGAAGGGGATGAAAGCGGTTATCGTGGCGCAGTTTCTCTCTGCGTTTGGCGATAATGCCCTACTGTTTGCCACTCTGGCGTTACTGAAAGCGCAGTTCTATCCGGAGTGGAGCCAGCCCATCCTGCAAATGGTGTTTGTAGGTGCTTACATTCTTTTTGCGCCGTTTGTCGGGCAGGTGGCGGATAGCTTCGCCAAAGGCCGGGTGATGATGTTTGCCAACGGCCTGAAGCTGCTGGGCGCAGCCAGTATCTGCTTTGGTATCAATCCGTTTCTCGGCTATACGCTGGTGGGTGTTGGTGCTGCAGCCTATTCACCGGCGAAATACGGTATTCTCGGCGAATTAACCACGGGTAGTAAGTTAGTGAAAGCTAACGGTTTAATGGAAGCTTCTACCATAGCGGCGATTTTGCTCGGTTCCGTAGCCGGTGGTGTGCTGGCTGACTGGCATGTCCTCGTCGCCCTGGCCGCATGCGCACTGGCCTACGGTGGTGCGGTCGTTGCCAATATCTACATTCCCAAACTGGCGGCGGCGCGTCCGGGGCAGTCCTGGAATCTCATCAACATGACCCGCAGTTTCCTGAATGCCTGCACCTCGCTATGGCGCAATGGTGAAACGCGTTTTTCGCTGGTGGGCACCAGTTTATTCTGGGGAGCGGGTGTCACGCTGCGTTTCCTGTTGGTGCTGTGGGTACCGGTGGCGCTGGGCATTACCGATAACGCTACGCCCACCTATCTCAACGCGATGGTAGCGATTGGTATCGTGGTTGGCGCAGGTGCGGCAGCGAAGTTAGTTACGCTGGAAACCGTGTCACGCTGTATGCCAGCCGGGATTTTGATTGGCGTGGTGGTACTGATTTTTTCCCTGCAACACGAGCTGCTGCCAGCCTATGCCTTGTTGATGCTGATTGGCGTGATGGGGGGCTTTTTTGTCGTTCCGCTCAATGCGTTGCTACAGGAGCGGGGTAAAAAAAGCGTCGGGGCGGGGAATGCGATTGCAGTACAAAACCTTGGCGAAAACAGCGCCATGTTGTTGATGCTGGGCATTTACTCGCTGGCGGTAATGATAGGCATCCCGGTCGTGCCCATTGGCATTGGCTTCGGTGCGCTGTTTGCGCTGGCAATAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAA", - "dna_sequence_length": 1194, - "functions": [ - "lysophospholipid transporter" - ], - "id": "CDS_2795", - "location": [ - [ - "NC_000913", - 2973862, - "-", - 1194 - ] - ], - "md5": "a72cacc57a8aee9d25c75351f7ca5338", - "parent_gene": "", - "protein_md5": "1026896290f734e7d904f3ba74bc8838", - "protein_translation": "MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQFYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINPFLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLADWHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGETRFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKLVTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGGFFVVPLNALLQERGKKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMIGIPVVPIGIGFGALFALAITALWIWQRRH", - "protein_translation_length": 397, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2832" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31119" - ], - [ - "gene_synonym", - "b2836" - ], - [ - "gene_synonym", - "GeneID:947315" - ], - [ - "gene_synonym", - "ASAP:ABE-0009302" - ], - [ - "gene_synonym", - "aas" - ], - [ - "gene_synonym", - "GI:16130740" - ], - [ - "gene_synonym", - "JW2804" - ], - [ - "gene_synonym", - "EcoGene:EG11679" - ], - [ - "gene_synonym", - "NP_417313.1" - ] - ], - "dna_sequence": "ATGCTTTTTAGCTTTTTTCGAAATTTGTGCCGTGTTTTGTATCGCGTTCGCGTTACGGGTGACACCCAGGCACTGAAGGGCGAGCGCGTTCTAATTACGCCTAATCACGTCTCTTTTATTGATGGCATTTTGCTTGGACTGTTTTTACCTGTGCGTCCAGTGTTTGCCGTTTACACCTCAATAAGCCAACAGTGGTATATGCGTTGGCTGAAATCATTTATCGACTTTGTTCCTCTCGACCCGACGCAACCTATGGCTATTAAACATCTGGTACGTCTGGTGGAACAGGGCCGACCAGTGGTGATTTTCCCTGAAGGACGCATCACCACGACAGGCTCGCTGATGAAAATCTACGATGGCGCGGGTTTTGTCGCGGCGAAGTCTGGTGCAACGGTTATTCCTGTGCGTATTGAAGGGGCGGAACTTACGCACTTCAGCCGCCTGAAAGGTCTGGTTAAACGTCGCTTGTTCCCGCAAATTACTCTGCATATTTTGCCACCAACGCAGGTGGCGATGCCGGATGCGCCGCGTGCCCGTGACCGTCGCAAAATCGCTGGCGAAATGCTGCATCAAATAATGATGGAAGCGCGAATGGCGGTGCGCCCGCGTGAAACGCTGTACGAATCTTTACTGAGTGCAATGTACCGCTTCGGAGCCGGGAAGAAATGTGTCGAAGACGTCAACTTTACCCCAGACTCCTATCGCAAATTGCTTACGAAAACGCTGTTTGTTGGACGCATCCTTGAAAAATACAGTGTTGAAGGCGAACGCATCGGCTTAATGCTGCCCAATGCAGGCATCAGTGCGGCAGTGATTTTTGGGGCCATCGCCCGTCGCCGCATGCCCGCAATGATGAACTACACTGCCGGGGTAAAAGGGCTGACCAGTGCTATTACGGCGGCTGAAATCAAAACCATCTTCACTTCCCGCCAGTTTCTCGATAAAGGCAAACTCTGGCATCTGCCGGAGCAACTTACTCAGGTGCGCTGGGTCTATCTGGAAGATTTAAAAGCAGATGTCACCACTGCCGACAAAGTATGGATCTTCGCTCATTTGCTGATGCCGCGTCTGGCACAGGTTAAACAGCAGCCGGAAGAAGAGGCGCTGATCCTTTTTACCTCCGGTTCTGAAGGCCATCCGAAAGGCGTCGTCCATAGCCATAAAAGCATTCTGGCGAATGTCGAGCAGATTAAAACGATTGCCGACTTCACCACCAACGATCGCTTTATGTCGGCGTTACCGCTGTTTCACTCCTTTGGGCTGACGGTAGGCCTGTTTACGCCACTGCTTACAGGTGCAGAAGTGTTCCTTTATCCAAGCCCGCTGCATTACCGCATTGTGCCGGAGTTGGTGTATGACCGCAGTTGCACCGTGTTGTTCGGCACCTCGACTTTCCTCGGTCACTACGCGCGTTTCGCCAACCCGTATGACTTCTATCGTCTACGCTATGTGGTGGCAGGCGCAGAAAAATTACAAGAAAGTACCAAACAGCTTTGGCAGGATAAATTTGGCCTGCGCATCCTTGAAGGCTACGGCGTGACCGAATGCGCGCCTGTCGTTTCTATCAACGTACCGATGGCGGCGAAACCCGGTACGGTAGGGCGTATTCTACCAGGAATGGATGCGCGCCTGTTGTCGGTCCCTGGTATCGAAGAGGGCGGACGCCTGCAACTGAAAGGGCCGAACATAATGAACGGCTATCTGCGGGTGGAGAAGCCAGGTGTACTGGAAGTGCCCACCGCCGAGAATGTTCGCGGCGAAATGGAGCGCGGCTGGTATGACACTGGCGATATTGTGCGTTTTGACGAGCAGGGCTTTGTGCAGATTCAGGGCCGCGCAAAACGCTTTGCCAAAATTGCAGGCGAAATGGTGTCGCTGGAAATGGTGGAACAACTGGCACTTGGTGTTTCGCCAGATAAAGTCCATGCCACTGCGATTAAGAGCGATGCCAGCAAAGGCGAGGCACTGGTGCTTTTCACCACAGATAACGAACTGACGCGCGATAAGTTGCAACAGTATGCCCGCGAGCACGGCGTGCCGGAGCTTGCTGTACCGCGCGATATTCGCTATCTGAAACAGATGCCATTACTTGGCAGCGGCAAACCTGACTTTGTCACGTTGAAAAGCTGGGTAGACGAAGCGGAACAACACGATGAGTGA", 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"MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGILLGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQITLHILPPTQVAMPDAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRMPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTRDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE", - "protein_translation_length": 719, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "galR" - ], - [ - "gene_synonym", - "ECK2835" - ], - [ - "gene_synonym", - "NP_417314.1" - ], - [ - "gene_synonym", - "b2837" - ], - [ - "gene_synonym", - "GeneID:947314" - ], - [ - "gene_synonym", - "GI:16130741" - ], - [ - "gene_synonym", - "JW2805" - ], - [ - "gene_synonym", - "ASAP:ABE-0009307" - ], - [ - "gene_synonym", - "EcoGene:EG10364" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03024" - ] - ], - "dna_sequence": "ATGGCGACCATAAAGGATGTAGCCCGACTGGCAGGCGTTTCAGTCGCCACCGTTTCCCGCGTCATTAATAATTCACCCAAAGCCAGCGAAGCTTCCCGGCTGGCTGTGCATAGTGCAATGGAGTCTCTTAGCTATCACCCGAACGCCAACGCCCGTGCGCTGGCGCAGCAGACCACTGAAACGGTCGGTCTGGTCGTTGGTGATGTTTCCGATCCGTTTTTCGGTGCAATGGTGAAAGCGGTCGAACAGGTGGCTTATCACACCGGTAATTTTTTATTGATTGGCAACGGTTACCACAACGAACAAAAAGAGCGTCAGGCCATTGAGCAACTGATCCGCCATCGCTGTGCTGCGTTGGTCGTCCATGCCAAAATGATCCCGGATGCTGATTTAGCCTCATTAATGAAACAAATGCCCGGTATGGTGCTGATCAACCGTATCCTGCCTGGCTTTGAAAACCGTTGTATTGCTCTGGACGATCGTTACGGTGCCTGGCTGGCAACGCGTCATTTAATTCAGCAAGGTCATACCCGCATTGGTTATCTGTGCTCTAACCACTCTATTTCTGACGCCGAAGATCGTCTGCAAGGGTATTACGATGCCCTTGCTGAAAGTGGTATTGCGGCCAATGACCGGCTGGTGACATTTGGCGAACCAGACGAAAGCGGCGGCGAACAGGCAATGACCGAGCTTTTGGGACGAGGAAGAAATTTCACTGCGGTAGCCTGTTATAACGATTCAATGGCGGCGGGTGCGATGGGCGTTCTCAATGATAATGGTATTGATGTACCGGGTGAGATTTCGTTAATTGGCTTTGATGATGTGCTGGTGTCACGCTATGTGCGTCCGCGCCTGACCACCGTGCGTTACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAA", - "dna_sequence_length": 1032, - "functions": [ - "galactose-inducible d-galactose regulon transcriptional repressor", - "autorepressor" - ], - "id": "CDS_2797", - "location": [ - [ - "NC_000913", - 2976599, - "+", - 1032 - ] - ], - "md5": "e90db74e3e74880be6969371c44bdbfb", - "parent_gene": "", - "protein_md5": "5ecc3e5982945c7eb445da4c620dac51", - "protein_translation": "MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNANARALAQQTTETVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDDRYGAWLATRHLIQQGHTRIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAAELALALADNRPLPEITNVFSPTLVRRHSVSTPSLEASHHATSD", - "protein_translation_length": 343, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2838" - ], - [ - "gene_synonym", - "NP_417315.1" - ], - [ - "gene_synonym", - "ECK2836" - ], - [ - "gene_synonym", - "lysA" - ], - [ - "gene_synonym", - "GeneID:947313" - ], - [ - "gene_synonym", - "GI:16130742" - ], - [ - "gene_synonym", - "EcoGene:EG10549" - ], - [ - "gene_synonym", - "JW2806" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00861" - ], - [ - "gene_synonym", - "ASAP:ABE-0009309" - ] - ], - "dna_sequence": "ATGCCACATTCACTGTTCAGCACCGATACCGATCTCACCGCCGAAAATCTGCTGCGTTTGCCCGCTGAATTTGGCTGCCCGGTGTGGGTCTACGATGCGCAAATTATTCGTCGGCAGATTGCAGCGCTGAAACAGTTTGATGTGGTGCGCTTTGCACAGAAAGCCTGTTCCAATATTCATATTTTGCGCTTAATGCGTGAGCAGGGCGTGAAAGTGGATTCCGTCTCGTTAGGCGAAATAGAGCGTGCGTTGGCGGCGGGTTACAATCCGCAAACGCACCCCGATGATATTGTTTTTACGGCAGATGTTATCGATCAGGCGACGCTTGAACGCGTCAGTGAATTGCAAATTCCGGTGAATGCGGGTTCTGTTGATATGCTCGACCAACTGGGCCAGGTTTCGCCAGGGCATCGGGTATGGCTGCGCGTTAATCCGGGGTTTGGTCACGGACATAGCCAAAAAACCAATACCGGTGGCGAAAACAGCAAGCACGGTATCTGGTACACCGATCTGCCCGCCGCACTGGACGTGATACAACGTCATCATCTGCAGCTGGTCGGCATTCACATGCACATTGGTTCTGGCGTTGATTATGCCCATCTGGAACAGGTGTGTGGTGCTATGGTGCGTCAGGTCATCGAATTCGGTCAGGATTTACAGGCTATTTCTGCGGGCGGTGGGCTTTCTGTTCCTTATCAACAGGGTGAAGAGGCGGTTGATACCGAACATTATTATGGTCTGTGGAATGCCGCGCGTGAGCAAATCGCCCGCCATTTGGGCCACCCTGTGAAACTGGAAATTGAACCGGGTCGCTTCCTGGTAGCGCAGTCTGGCGTATTAATTACTCAGGTGCGGAGCGTCAAACAAATGGGGAGCCGCCACTTTGTGCTGGTTGATGCCGGGTTCAACGATCTGATGCGCCCGGCAATGTACGGTAGTTACCACCATATCAGTGCCCTGGCAGCTGATGGTCGTTCTCTGGAACACGCGCCAACGGTGGAAACCGTCGTCGCCGGACCGTTATGTGAATCGGGCGATGTCTTTACCCAGCAGGAAGGGGGAAATGTTGAAACCCGCGCCTTGCCGGAAGTGAAGGCAGGTGATTATCTGGTACTGCATGATACAGGGGCATATGGCGCATCAATGTCATCCAACTACAATAGCCGTCCGCTGTTACCAGAAGTTCTGTTTGATAATGGTCAGGCGCGGTTGATTCGCCGTCGCCAGACCATCGAAGAATTACTGGCGCTGGAATTGCTTTAA", - "dna_sequence_length": 1263, - "functions": [ - "diaminopimelate decarboxylase, PLP-binding" - ], - "id": "CDS_2798", - "location": [ - [ - "NC_000913", - 2978899, - "-", - 1263 - ] - ], - "md5": "150313bdc9dc9379b3504f8b0a00659e", - "parent_gene": "", - "protein_md5": "ca1063d432cd5ee537a415830b61244f", - "protein_translation": "MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALELL", - "protein_translation_length": 420, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2839" - ], - [ - "gene_synonym", - "ECK2837" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03030" - ], - [ - "gene_synonym", - "EcoGene:EG10551" - ], - [ - "gene_synonym", - "GeneID:947311" - ], - [ - "gene_synonym", - "GI:16130743" - ], - [ - "gene_synonym", - "lysR" - ], - [ - "gene_synonym", - "ASAP:ABE-0009313" - ], - [ - "gene_synonym", - "JW2807" - ], - [ - "gene_synonym", - "NP_417316.1" - ] - ], - "dna_sequence": "ATGGCCGCCGTTAACTTACGTCATATTGAAATTTTTCATGCGGTAATGACCGCCGGAAGCCTGACTGAGGCGGCACACCTGCTACACACCTCACAGCCAACCGTCAGCCGCGAACTTGCGCGCTTTGAGAAGGTGATCGGGCTGAAATTGTTTGAGCGCGTACGTGGGCGATTACATCCTACCGTGCAAGGACTGCGTCTGTTTGAAGAAGTGCAACGATCCTGGTACGGACTGGATCGCATTGTCAGCGCCGCAGAAAGTCTGCGCGAGTTTCGCCAGGGAGAACTGTCTATTGCCTGCCTGCCGGTCTTTTCGCAATCTTTTTTACCGCAGCTCCTGCAACCCTTTCTGGCACGTTATCCCGATGTCAGCTTAAATATCGTGCCCCAGGAATCACCGCTACTTGAAGAGTGGCTCTCGGCCCAGCGTCATGATTTAGGACTCACTGAAACGCTCCATACGCCTGCGGGAACAGAACGTACCGAATTACTCTCTTTAGATGAAGTGTGTGTGTTACCTCCGGGTCATCCGCTGGCGGTAAAAAAGGTATTAACGCCGGATGATTTTCAGGGTGAGAACTACATCAGCCTTTCCCGTACTGACAGCTATCGCCAGTTGCTGGATCAGCTATTTACTGAACATCAGGTTAAACGACGCATGATCGTAGAAACCCACAGCGCCGCGTCAGTCTGCGCAATGGTACGGGCGGGGGTAGGTATTTCGGTGGTTAACCCGCTCACCGCACTAGATTATGCGGCAAGCGGTTTAGTGGTGCGGCGGTTCAGTATTGCGGTTCCGTTCACCGTCAGCCTGATCCGCCCCCTGCACCGCCCGTCATCAGCGCTGGTTCAGGCGTTTAGTGGGCATTTACAAGCGGGGTTACCGAAACTGGTCACTTCTCTTGACGCTATTTTGTCGTCAGCTACGACAGCATAA", - "dna_sequence_length": 936, - "functions": [ - "transcriptional activator of lysA", - "autorepressor" - ], - "id": "CDS_2799", - "location": [ - [ - "NC_000913", - 2979021, - "+", - 936 - ] - ], - "md5": "145802e895635277c0bdb5b1fc77c7c9", - "parent_gene": "", - "protein_md5": "8f06cdf609cc9068d25506aa8d5385fe", - "protein_translation": "MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEKVIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLPVFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTERTELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKRRMIVETHSAASVCAMVRAGVGISVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLHRPSSALVQAFSGHLQAGLPKLVTSLDAILSSATTA", - "protein_translation_length": 311, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygeA" - ], - [ - "gene_synonym", - "ECK2838" - ], - [ - "gene_synonym", - "NP_417317.1" - ], - [ - "gene_synonym", - "GI:16130744" - ], - [ - "gene_synonym", - "JW2808" - ], - [ - "gene_synonym", - "GeneID:947348" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03813" - ], - [ - "gene_synonym", - "ASAP:ABE-0009315" - ], - [ - "gene_synonym", - "b2840" - ], - [ - "gene_synonym", - "EcoGene:EG11157" - ] - ], - "dna_sequence": "ATGAAAACAATTGGTTTGCTGGGAGGAATGAGCTGGGAATCCACCATTCCTTACTATCGTTTGATAAATGAAGGCATTAAACAGCGGCTTGGTGGGCTTCACTCTGCGCAAGTGCTGCTACATAGCGTCGATTTTCATGAAATAGAAGAGTGCCAGCGTCGCGGGGAATGGGATAAAACCGGGGACATTCTGGCTGAGGCGGCGCTTGGCTTACAGCGGGCGGGCGCAGAAGGTATTGTGCTATGTACCAATACGATGCATAAAGTGGCGGATGCCATTGAGTCACGTTGCACTCTGCCTTTCTTACACATTGCGGATGCCACCGGACGTGCAATTACCGGGGCCGGAATGACTCGTGTGGCGCTGCTGGGTACGCGTTACACCATGGAACAGGATTTTTATCGCGGGCGGCTGACGGAACAATTTTCCATCAATTGTCTTATTCCTGAAGCGGATGAACGGGCGAAAATTAATCAGATTATTTTTGAAGAACTGTGTCTGGGGCAATTTACCGAAGCGTCACGCGCTTATTGTGCGCAAGTGATTGCTCGCCTTGCAGAACAGGGCGCACAGGGCGTCATTTTTGGCTGCACAGAAATTGGTTTACTGGTGCCAGAAGAGCGCAGTGTTTTGCCTGTGTTTGATACCGCGGCGATCCATGCCGAGGATGCTGTCGCTTTTATGCTGTCGTAG", - "dna_sequence_length": 693, - "functions": [ - "Asp/Glu_racemase family protein" - ], - "id": "CDS_2800", - "location": [ - [ - "NC_000913", - 2980635, - "-", - 693 - ] - ], - "md5": "bb31d68eec8f4a6e4199d5f9db639de3", - "parent_gene": "", - "protein_md5": "50b6523e7b1ee39a47d6d54927c327dd", - "protein_translation": "MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLHSVDFHEIEECQRRGEWDKTGDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFLHIADATGRAITGAGMTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYCAQVIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAAIHAEDAVAFMLS", - "protein_translation_length": 230, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10056" - ], - [ - "gene_synonym", - "ECK2839" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE24" - ], - [ - "gene_synonym", - "NP_417318.1" - ], - [ - "gene_synonym", - "GI:16130745" - ], - [ - "gene_synonym", - "JW2809" - ], - [ - "gene_synonym", - "ASAP:ABE-0009319" - ], - [ - "gene_synonym", - "araE" - ], - [ - "gene_synonym", - "b2841" - ], - [ - "gene_synonym", - "GeneID:947341" - ] - ], - "dna_sequence": "ATGGTTACTATCAATACGGAATCTGCTTTAACGCCACGTTCTTTGCGGGATACGCGGCGTATGAATATGTTTGTTTCGGTAGCTGCTGCGGTCGCAGGATTGTTATTTGGTCTTGATATCGGCGTAATCGCCGGAGCGTTGCCGTTCATTACCGATCACTTTGTGCTGACCAGTCGTTTGCAGGAATGGGTGGTTAGTAGCATGATGCTCGGTGCAGCAATTGGTGCGCTGTTTAATGGTTGGCTGTCGTTCCGCCTGGGGCGTAAATACAGCCTGATGGCGGGGGCCATCCTGTTTGTACTCGGTTCTATAGGGTCCGCTTTTGCGACCAGCGTAGAGATGTTAATCGCCGCTCGTGTGGTGCTGGGCATTGCTGTCGGGATCGCGTCTTACACCGCTCCTCTGTATCTTTCTGAAATGGCAAGTGAAAACGTTCGCGGTAAGATGATCAGTATGTACCAGTTGATGGTCACACTCGGCATCGTGCTGGCGTTTTTATCCGATACAGCGTTCAGTTATAGCGGTAACTGGCGCGCAATGTTGGGGGTTCTTGCTTTACCAGCAGTTCTGCTGATTATTCTGGTAGTCTTCCTGCCAAATAGCCCGCGCTGGCTGGCGGAAAAGGGGCGTCATATTGAGGCGGAAGAAGTATTGCGTATGCTGCGCGATACGTCGGAAAAAGCGCGAGAAGAACTCAACGAAATTCGTGAAAGCCTGAAGTTAAAACAGGGCGGTTGGGCACTGTTTAAGATCAACCGTAACGTCCGTCGTGCTGTGTTTCTCGGTATGTTGTTGCAGGCGATGCAGCAGTTTACCGGTATGAACATCATCATGTACTACGCGCCGCGTATCTTCAAAATGGCGGGCTTTACGACCACAGAACAACAGATGATTGCGACTCTGGTCGTAGGGCTGACCTTTATGTTCGCCACCTTTATTGCGGTGTTTACGGTAGATAAAGCAGGGCGTAAACCGGCTCTGAAAATTGGTTTCAGCGTGATGGCGTTAGGCACTCTGGTGCTGGGCTATTGCCTGATGCAGTTTGATAACGGTACGGCTTCCAGTGGCTTGTCCTGGCTCTCTGTTGGCATGACGATGATGTGTATTGCCGGTTATGCGATGAGCGCCGCGCCAGTGGTGTGGATCCTGTGCTCTGAAATTCAGCCGCTGAAATGCCGCGATTTCGGTATTACCTGTTCGACCACCACGAACTGGGTGTCGAATATGATTATCGGCGCGACCTTCCTGACACTGCTTGATAGCATTGGCGCTGCCGGTACGTTCTGGCTCTACACTGCGCTGAACATTGCGTTTGTGGGCATTACTTTCTGGCTCATTCCGGAAACCAAAAATGTCACGCTGGAACATATCGAACGCAAACTGATGGCAGGCGAGAAGTTGAGAAATATCGGCGTCTGA", - "dna_sequence_length": 1419, - "functions": [ - "arabinose transporter" - ], - "id": "CDS_2801", - "location": [ - [ - "NC_000913", - 2982182, - "-", - 1419 - ] - ], - "md5": "b53191ff5a443c7e6bca5ec1af3abbcc", - "parent_gene": "", - "protein_md5": "4ca9c137e2fb78d8fa4a7902275e4e0a", - "protein_translation": "MVTINTESALTPRSLRDTRRMNMFVSVAAAVAGLLFGLDIGVIAGALPFITDHFVLTSRLQEWVVSSMMLGAAIGALFNGWLSFRLGRKYSLMAGAILFVLGSIGSAFATSVEMLIAARVVLGIAVGIASYTAPLYLSEMASENVRGKMISMYQLMVTLGIVLAFLSDTAFSYSGNWRAMLGVLALPAVLLIILVVFLPNSPRWLAEKGRHIEAEEVLRMLRDTSEKAREELNEIRESLKLKQGGWALFKINRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTFWLYTALNIAFVGITFWLIPETKNVTLEHIERKLMAGEKLRNIGV", - "protein_translation_length": 472, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yqeD" - ], - [ - "gene_synonym", - "ygeC" - ], - [ - "gene_synonym", - "ASAP:ABE-0009330" - ], - [ - "gene_synonym", - "ECK2840" - ], - [ - "gene_synonym", - "GeneID:947323" - ], - [ - "gene_synonym", - "kduD" - ], - [ - "gene_synonym", - "GI:16130746" - ], - [ - "gene_synonym", - "EcoGene:EG12361" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37769" - ], - [ - "gene_synonym", - "NP_417319.1" - ], - [ - "gene_synonym", - "JW2810" - ], - [ - "gene_synonym", - "b2842" - ] - ], - "dna_sequence": "ATGATTTTAAGTGCATTTTCTCTCGAAGGTAAAGTTGCGGTCGTCACTGGTTGTGATACTGGACTGGGTCAGGGGATGGCGTTGGGGCTGGCGCAAGCGGGCTGTGACATTGTTGGCATTAACATCGTTGAACCGACTGAAACCATCGAGCAGGTCACAGCGCTGGGGCGTCGTTTTTTAAGCCTGACCGCCGATCTGCGAAAGATTGATGGTATTCCAGCACTGCTGGATCGCGCGGTAGCGGAGTTTGGTCATATTGATATCCTGGTGAATAACGCCGGATTGATTCGCCGCGAAGATGCTCTCGAGTTCAGCGAAAAGGACTGGGACGATGTCATGAACCTGAATATCAAGAGCGTATTCTTCATGTCTCAGGCAGCGGCGAAACACTTTATCGCGCAAGGCAATGGCGGCAAGATTATCAATATCGCGTCAATGCTCTCCTTCCAGGGCGGGATCCGTGTGCCTTCTTATACCGCATCAAAAAGCGGCGTGATGGGTGTGACGCGATTGATGGCGAACGAATGGGCTAAACACAACATTAATGTTAATGCGATAGCCCCGGGTTACATGGCGACCAACAATACTCAACAACTACGGGCAGATGAACAACGTAGCGCGGAAATTCTCGACCGCATTCCAGCTGGTCGTTGGGGACTGCCGAGTGACCTGATGGGGCCGATAGTGTTCCTTGCCTCCAGCGCTTCAGATTATGTGAATGGTTATACCATTGCCGTGGATGGCGGTTGGCTGGCGCGTTAA", - "dna_sequence_length": 762, - "functions": [ - "2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase", - "KDG oxidoreductase", - "20-ketosteroid reductase" - ], - "id": "CDS_2802", - "location": [ - [ - "NC_000913", - 2983258, - "-", - 762 - ] - ], - "md5": "a34bb82c4945905949d6cacdfe61a47b", - "parent_gene": "", - "protein_md5": "c2394212a6c13b653747deb8690438ef", - "protein_translation": "MILSAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAEFGHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYVNGYTIAVDGGWLAR", - "protein_translation_length": 253, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yqeE" - ], - [ - "gene_synonym", - "kduI" - ], - [ - "gene_synonym", - "NP_417320.1" - ], - [ - "gene_synonym", - "ECK2841" - ], - [ - "gene_synonym", - "ASAP:ABE-0009332" - ], - [ - "gene_synonym", - "GI:16130747" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46938" - ], - [ - "gene_synonym", - "GeneID:947319" - ], - [ - "gene_synonym", - "EcoGene:EG13096" - ], - [ - "gene_synonym", - "b2843" - ], - [ - "gene_synonym", - "JW2811" - ] - ], - "dna_sequence": "GTGGACGTAAGACAGAGCATCCACAGTGCGCACGCAAAAACGCTGGATACCCAAGGGCTGCGCAATGAATTTTTGGTTGAAAAGGTATTTGTCGCCGATGAGTACACCATGGTTTACAGCCACATTGACCGAATTATTGTTGGCGGCATTATGCCGATAACTAAAACGGTTTCCGTTGGCGGGGAAGTTGGTAAACAACTCGGCGTAAGCTATTTCCTTGAACGTCGCGAGTTAGGTGTTATCAATATTGGCGGTGCCGGTACGATTACTGTCGATGGCCAATGCTATGAAATCGGTCACCGCGACGCCCTGTATGTTGGTAAAGGTGCAAAAGAAGTTGTCTTTGCCAGTATTGATACCGGCACTCCGGCGAAGTTTTATTACAATTGCGCACCCGCGCATACGACGTATCCCACCAAAAAAGTCACACCGGACGAAGTATCTCCAGTCACGTTAGGCGATAACCTCACCAGTAACCGTCGCACGATTAACAAATATTTTGTCCCGGATGTACTGGAAACCTGCCAATTGAGTATGGGGCTGACGGAGCTGGCTCCGGGTAACTTGTGGAACACCATGCCGTGTCACACCCACGAGCGCCGGATGGAAGTTTATTTCTATTTCAATATGGATGATGACGCCTGCGTTTTCCACATGATGGGGCAGCCGCAAGAAACGCGTCATATTGTGATGCATAACGAGCAGGCGGTGATCTCCCCGAGCTGGTCGATCCATTCCGGTGTCGGAACCAAAGCTTATACCTTTATCTGGGGCATGGTCGGTGAAAACCAGGTCTTTGATGATATGGACCATGTGGCCGTTAAAGATTTGCGCTAG", - "dna_sequence_length": 837, - "functions": [ - "hexuronate isomerase" - ], - "id": "CDS_2803", - "location": [ - [ - "NC_000913", - 2984124, - "-", - 837 - ] - ], - "md5": "8aad7f4e692528af9a6b5950bb6ca12b", - "parent_gene": "", - "protein_md5": "5353d578d66c769750eaa2c05b85ad44", - "protein_translation": "MDVRQSIHSAHAKTLDTQGLRNEFLVEKVFVADEYTMVYSHIDRIIVGGIMPITKTVSVGGEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNRRTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFHMMGQPQETRHIVMHNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKDLR", - "protein_translation_length": 278, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009335" - ], - [ - "gene_synonym", - "NP_417321.2" - ], - [ - "gene_synonym", - "yqeF" - ], - [ - "gene_synonym", - "ECK2842" - ], - [ - "gene_synonym", - "EcoGene:EG13097" - ], - [ - "gene_synonym", - "GeneID:947324" - ], - [ - "gene_synonym", - "GI:90111494" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46939" - ], - [ - "gene_synonym", - "JW5453" - ], - [ - "gene_synonym", - "b2844" - ] - ], - "dna_sequence": "ATGAAAGACGTTGTGATTGTCGGGGCGTTACGGACACCTATCGGCTGCTTTCGTGGTGCGTTAGCGGGTCATTCCGCCGTGGAACTTGGTAGTCTGGTCGTGAAAGCGTTAATAGAACGTACCGGCGTTCCTGCATATGCGGTGGATGAAGTAATTCTTGGTCAGGTGTTGACTGCAGGGGCAGGGCAGAATCCGGCAAGGCAATCGGCTATTAAAGGTGGTCTGCCTAATAGCGTTTCTGCAATCACTATTAATGACGTTTGCGGTTCCGGGCTTAAAGCACTGCATCTGGCTACTCAGGCGATACAGTGTGGCGAGGCTGATATTGTCATCGCCGGTGGCCAGGAAAACATGAGCCGCGCACCACATGTTCTGACTGATAGCCGCACCGGTGCACAGCTTGGCAATAGCCAGTTGGTTGACAGTCTTGTGCATGATGGGTTGTGGGATGCCTTCAATGATTATCATATTGGTGTCACCGCCGAAAATCTGGCTCGCGAATATGGCATCAGCCGTCAGTTGCAGGATGCTTACGCACTTAGCTCGCAACAAAAAGCGCGAGCGGCGATTGACGCCGGACGATTTAAAGATGAGATCGTCCCGGTAATGACCCAAAGTAACGGGCAGACGTTGGTTGTTGATACCGATGAACAGCCACGCACTGACGCCAGCGCAGAAGGCTTAGCCCGTTTAAATCCTTCATTTGATAGTCTCGGTTCTGTGACAGCGGGTAATGCATCATCCATAAACGATGGCGCAGCTGCGGTAATGATGATGAGCGAAGCCAAAGCACGAGCGTTGAATTTACCCGTGCTGGCCCGCATTCGCGCATTTGCCAGCGTTGGTGTAGATCCGGCATTGATGGGAATTGCGCCGGTGTATGCGACCCGCCGTTGCCTGGAGCGTGTAGGCTGGCAGTTGGCTGAAGTCGATCTTATCGAGGCTAATGAAGCGTTTGCTGCACAGGCGCTTTCGGTTGGCAAGATGCTTGAGTGGGATGAGCGTCGGGTCAATGTCAATGGTGGCGCGATCGCACTCGGTCACCCGATAGGCGCTTCCGGTTGCCGAATCCTGGTTTCTCTGGTTCATGAAATGGTGAAACGTAATGCCCGCAAAGGACTGGCAACGCTTTGTATCGGCGGGGGCCAGGGTGTGGCATTGACCATTGAACGTGACGAATAG", - "dna_sequence_length": 1182, - "functions": [ - "short chain acyltransferase" - ], - "id": "CDS_2804", - "location": [ - [ - "NC_000913", - 2985592, - "-", - 1182 - ] - ], - "md5": "325f5c0fe271d358cd2e5f492f026880", - "parent_gene": "", - "protein_md5": "dfd8186b409f025f704cf5b8326bf306", - "protein_translation": "MKDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTGVPAYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAIQCGEADIVIAGGQENMSRAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVTAENLAREYGISRQLQDAYALSSQQKARAAIDAGRFKDEIVPVMTQSNGQTLVVDTDEQPRTDASAEGLARLNPSFDSLGSVTAGNASSINDGAAAVMMMSEAKARALNLPVLARIRAFASVGVDPALMGIAPVYATRRCLERVGWQLAEVDLIEANEAFAAQALSVGKMLEWDERRVNVNGGAIALGHPIGASGCRILVSLVHEMVKRNARKGLATLCIGGGQGVALTIERDE", - "protein_translation_length": 393, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yqeG" - ], - [ - "gene_synonym", - "ECK2843" - ], - [ - "gene_synonym", - "EcoGene:EG13098" - ], - [ - "gene_synonym", - "GeneID:945028" - ], - [ - "gene_synonym", - "ASAP:ABE-0009345" - ], - [ - "gene_synonym", - "NP_417322.1" - ], - [ - "gene_synonym", - "b2845" - ], - [ - "gene_synonym", - "JW2813" - ], - [ - "gene_synonym", - "GI:16130749" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63340" - ] - ], - "dna_sequence": "ATGTCTAATATTTGGTCTAAAGAAGAAACTCTGTGGAGTTTCGCGCTCTACGGCACAGCCGTTGGTGCAGGCACGCTCTTCCTTCCTATTCAGTTAGGTTCGGCAGGGGCTGTGGTCCTGTTTATTACTGCTCTGGTCGCCTGGCCTTTAACATATTGGCCACATAAAGCCTTGTGCCAGTTCATCCTCTCATCAAAAACATCAGCAGGTGAAGGGATAACGGGCGCGGTAACACACTACTATGGCAAGAAGATTGGTAATCTGATTACCACGCTGTACTTCATCGCCTTTTTTGTCGTCGTGTTGATATATGCAGTGGCAATTACCAACTCACTTACGGAACAGCTGGCAAAGCATATGGTTATTGATCTTCGCATCCGTATGTTGGTGAGTCTGGGTGTTGTATTAATTCTGAATCTCATTTTTCTGATGGGACGTCATGCCACTATTCGGGTAATGGGATTTTTGGTATTCCCATTGATTGCCTATTTCTTATTTCTTTCCATTTACCTTGTCGGTAGTTGGCAACCTGATCTATTAACAACCCAGGTAGAGTTCAATCAGAATACCCTTCACCAGATATGGATATCGATTCCCGTGATGGTTTTCGCCTTTAGCCATACGCCCATTATTTCTACGTTTGCCATAGACAGACGTGAAAAATATGGCGAACACGCTATGGATAAATGCAAAAAAATTATGAAAGTCGCTTATCTCATCATCTGCATAAGTGTACTGTTCTTTGTCTTTAGCTGCCTGCTTTCTATTCCACCTTCGTATATTGAAGCTGCTAAAGAAGAAGGGGTCACCATTTTATCGGCGCTTTCTATGCTGCCGAACGCCCCAGCATGGTTGTCAATTTCCGGGATTATTGTCGCAGTAGTTGCGATGTCGAAATCATTCCTGGGTACGTACTTTGGCGTTATTGAAGGTGCCACAGAGGTCGTCAAAACAACACTACAGCAGGTTGGTGTAAAGAAAAGTCGTGCATTTAACCGCGCACTATCAATTATGTTGGTATCGCTGATTACCTTCATTGTTTGTTGCATTAACCCGAACGCGATTTCGATGATTTACGCGATCAGCGGCCCGCTCATTGCCATGATACTTTTCATCATGCCTACGCTGTCAACGTATCTCATCCCGGCGCTTAAACCCTGGCGTTCCATCGGAAATCTGATTACGCTGATCGTGGGTATCCTGTGCGTATCGGTAATGTTCTTTAGCTAA", - "dna_sequence_length": 1230, - "functions": [ - "putative transporter" - ], - "id": "CDS_2805", - "location": [ - [ - "NC_000913", - 2985847, - "+", - 1230 - ] - ], - "md5": "2c51a75ca31ccde41d46fd3b205c8bcb", - "parent_gene": "", - "protein_md5": "2e8772e4139a5c9333f3cfb4f88bd647", - "protein_translation": "MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITALVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVLIYAVAITNSLTEQLAKHMVIDLRIRMLVSLGVVLILNLIFLMGRHATIRVMGFLVFPLIAYFLFLSIYLVGSWQPDLLTTQVEFNQNTLHQIWISIPVMVFAFSHTPIISTFAIDRREKYGEHAMDKCKKIMKVAYLIICISVLFFVFSCLLSIPPSYIEAAKEEGVTILSALSMLPNAPAWLSISGIIVAVVAMSKSFLGTYFGVIEGATEVVKTTLQQVGVKKSRAFNRALSIMLVSLITFIVCCINPNAISMIYAISGPLIAMILFIMPTLSTYLIPALKPWRSIGNLITLIVGILCVSVMFFS", - "protein_translation_length": 409, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2844" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46941" - ], - [ - "gene_synonym", - "EcoGene:EG13099" - ], - [ - "gene_synonym", - "yqeH" - ], - [ - "gene_synonym", - "NP_417323.2" - ], - [ - "gene_synonym", - "GeneID:945263" - ], - [ - "gene_synonym", - "GI:90111495" - ], - [ - "gene_synonym", - "ASAP:ABE-0009349" - ], - [ - "gene_synonym", - "b2846" - ], - [ - "gene_synonym", - "JW5454" - ] - ], - "dna_sequence": "ATGGGGCTTTGTAGTCGTTATAAAAGTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGATATATTTTTGTCGATTTTTCAGTAAGTTTTTTACGTCTATTCCTTGAAAAAGACTGGATTGACTATCTTGCAAGTACTGACATGGGGATTGTTTTAGTCAGCGACCGCAATATGCAATCGTTAGCTAATTACTGGCGAAAACACAACTCAGCAATATCTGCTGTCATATATAATGATGATGGTCTTGATGTTGCCAATGAAAAGATCAGACAACTATTTATTGGTCGTTATTTATCATTTACCGGAGGTAACACATTAACTCAGATGGAATTCACCATAATGGGGTATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAAGCAACGAATCGAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGA", - "dna_sequence_length": 633, - "functions": [ - "putative LuxR family transcriptional regulator" - ], - "id": "CDS_2806", - "location": [ - [ - "NC_000913", - 2987536, - "+", - 633 - ] - ], - "md5": "9078ba1953b18167c5e69235a5128a9a", - "parent_gene": "", - "protein_md5": "d396e5a3ee8d4a3fda79e6efbf722c34", - "protein_translation": "MGLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEESSYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLFLEKDWIDYLASTDMGIVLVSDRNMQSLANYWRKHNSAISAVIYNDDGLDVANEKIRQLFIGRYLSFTGGNTLTQMEFTIMGYMVSGYNPYQIAEVLDMDIRSIYAYKQRIEKRMGGKINELFIRSHSVQH", - "protein_translation_length": 210, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2845" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46942" - ], - [ - "gene_synonym", - "yqeI" - ], - [ - "gene_synonym", - "GeneID:947327" - ], - [ - "gene_synonym", - "ASAP:ABE-0009352" - ], - [ - "gene_synonym", - "EcoGene:EG13100" - ], - [ - "gene_synonym", - "GI:16130751" - ], - [ - "gene_synonym", - "NP_417324.1" - ], - [ - "gene_synonym", - "b2847" - ], - [ - "gene_synonym", - "JW2815" - ] - ], - "dna_sequence": "ATGTACTGGATTATTAACGATAATATCGAGTTCTGGCCTGAGCACCGAAAATTAATATCGGTACATAACGCCGATCTTAACGTCGTTCTGACAACGCCAGCCAGTCGATGTTTATCACTTCTACTTGAAGCTTTTCCTGATGTGGTTGCACAACAAGATTTTTTCACCAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAGACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAAGATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAAGACTGTTGCGGAAATTAATGGCTGCCATTTTAATGTAACAGAAGATACAATTGATGGGTTGAAAGAGTTCGATAAATATAAAACACGGATACTGGATTCGGGGATTAACTGTAAAAAACATCCGTGGTTATACTTCCCTCTTGCAAAATCCTCACCGGGGATGATTGTTATGGCATGCAATAAAAACTATAACCAACATGAAGTGGCAAACTGTTTAACCCTGTCTTACCGTGAGGTTAATCGTGATTGA", - "dna_sequence_length": 810, - "functions": [ - "putative transcriptional regulator" - ], - "id": "CDS_2807", - "location": [ - [ - "NC_000913", - 2988502, - "+", - 810 - ] - ], - "md5": "ca3bcea61a9a61a1c86a4c16b18fc5f0", - "parent_gene": "", - "protein_md5": "48f6c995576b4b9606bc8f6faa743c95", - "protein_translation": "MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEAFPDVVAQQDFFTRVWEEEGMRVPTNTLYQNISIIRRGFRAVGDTTHSLIATVPRRGFKIHNDINIQNHVINSSTDAHTHNAPPAIKVNAGYKESIGGAKNFNNKILKHIKSHLIMLSAFVIGAYSAYWLWNNNQPKPFFKDYKTVAEINGCHFNVTEDTIDGLKEFDKYKTRILDSGINCKKHPWLYFPLAKSSPGMIVMACNKNYNQHEVANCLTLSYREVNRD", - "protein_translation_length": 269, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2846" - ], - [ - "gene_synonym", - "NP_417325.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46943" - ], - [ - "gene_synonym", - "yqeJ" - ], - [ - "gene_synonym", - "b2848" - ], - [ - "gene_synonym", - "GI:90111496" - ], - [ - "gene_synonym", - "ASAP:ABE-0009354" - ], - [ - "gene_synonym", - "GeneID:947328" - ], - [ - "gene_synonym", - "JW5455" - ], - [ - "gene_synonym", - "EcoGene:EG13101" - ] - ], - "dna_sequence": "GTGATTGATTATAAAAAAAACTTATTATTTATTTTAGTTTTTATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACACTGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGTAATTTTTAATGACCAGGGACGAGCAAATCTTACCATCGACTTTATGTATAACAAAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGTAACAGAGAAAGTAAATCAATACGGCGAAATATTGAATACACATGGATTGAAAACTATGACACAGCCCATTTAACATCAAAGAAAGTTAATAAGTTTGAGATTATGGATCAAGTTGATGATGATAGACTTGCACAACTTATTCCTGATTTTTATGTCTTTCCAGAAAAAAGTGTAAGCTATAATATACTAAAGCAAGGTAAGCATGCTTTTATTTTGAGCATTGGTAACAGAGCAATAATGCATTGTGCAAGGTAA", - "dna_sequence_length": 483, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2808", - "location": [ - [ - "NC_000913", - 2989304, - "+", - 483 - ] - ], - "md5": "e47f6020f992acd879a219387fa3ed7e", - "parent_gene": "", - "protein_md5": "4e43668734e105de99887301275df018", - "protein_translation": "MIDYKKNLLFILVFISGFILFTVYSYTAEKMIYNETCTANWVIFNDQGRANLTIDFMYNKKNKTGTVALSGTWQQGNRESKSIRRNIEYTWIENYDTAHLTSKKVNKFEIMDQVDDDRLAQLIPDFYVFPEKSVSYNILKQGKHAFILSIGNRAIMHCAR", - "protein_translation_length": 160, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14488" - ], - [ - "gene_synonym", - "YP_002791253.1" - ], - [ - "gene_synonym", - "yqeL" - ], - [ - "gene_synonym", - "GI:226524744" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P613" - ], - [ - "gene_synonym", - "ECK4498" - ], - [ - "gene_synonym", - "GeneID:7751637" - ], - [ - "gene_synonym", - "b4683" - ] - ], - "dna_sequence": "ATGAAAGATGTTGATCAAATCTTTGATGCTTTAGACTGCCATATACTGCGAGAATATTTAATTTTATTGTTTTATGATTAA", - "dna_sequence_length": 81, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2809", - "location": [ - [ - "NC_000913", - 2989899, - "-", - 81 - ] - ], - "md5": "dda1b68095d2611447029069a932746a", - "parent_gene": "", - "protein_md5": "fb4a01df4a2f6b52fa1306fda85f2882", - "protein_translation": "MKDVDQIFDALDCHILREYLILLFYD", - "protein_translation_length": 26, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2847" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77136" - ], - [ - "gene_synonym", - "NP_417326.2" - ], - [ - "gene_synonym", - "GeneID:947329" - ], - [ - "gene_synonym", - "yqeK" - ], - [ - "gene_synonym", - "b2849" - ], - [ - "gene_synonym", - "ASAP:ABE-0009356" - ], - [ - "gene_synonym", - "GI:90111497" - ], - [ - "gene_synonym", - "JW2817" - ], - [ - "gene_synonym", - "EcoGene:EG13274" - ] - ], - "dna_sequence": "ATGGACATTGAATTTTCGCAGATTCATGAAATGGTCTATATGCATGATATTGTAAATTCGGACTCGAAAAAGAAACCAAGGATTCCGTTAAAAAAATTCCTTAATGCTGAGAATGTTCTCACGCAAACAACATCATGGACATTAAATTCAAGATATGTGAATGTTAATTCTGTCAATAAAGTCAACGTAAAGAGTAAAGTTAAAAACAGTTATATCTCACGATCTGTCAATGATGAGTTTAGTTTAACAGATGATGAAATCAATTCTTTTAAAGAAACGTTAGTCCTTTCCTCTATTGATTCACTGAGTAAACTGGTTCTTAATAATCCTCTTTCTGTATTGTTTACATCGACTGTACGAAGGAATAATAATCGAGCTAAGATGAATGTCGAGTTCGACTCATGGATTTGCACCAGATGTTGTTGA", - "dna_sequence_length": 426, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2810", - "location": [ - [ - "NC_000913", - 2990360, - "-", - 426 - ] - ], - "md5": "6e5eeab74e5dd267548d2a6a15b87464", - "parent_gene": "", - "protein_md5": "bffebb6783c3db160caa845dc1733a29", - "protein_translation": "MDIEFSQIHEMVYMHDIVNSDSKKKPRIPLKKFLNAENVLTQTTSWTLNSRYVNVNSVNKVNVKSKVKNSYISRSVNDEFSLTDDEINSFKETLVLSSIDSLSKLVLNNPLSVLFTSTVRRNNNRAKMNVEFDSWICTRCC", - "protein_translation_length": 141, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygeF" - ], - [ - "gene_synonym", - "GeneID:946823" - ], - [ - "gene_synonym", - "EcoGene:EG13036" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46786" - ], - [ - "gene_synonym", - "ECK2848" - ], - [ - "gene_synonym", - "JW2818" - ], - [ - "gene_synonym", - "ASAP:ABE-0009361" - ], - [ - "gene_synonym", - "b2850" - ] - ], - "dna_sequence": "ATGAAGCCACGAAATATTAATAATAGCCTACCACTGCAACCATTAGTTCCTGATCAGGAGAACAAAAATAAGAAAAATGAAGAGAAATCCGTTAATCCAGTTAAAATCACAATGGGGTCTGGTTTAAATTATATTGAACAAGAATCTCTTGGAGGAAAATATCTAACACATGATTTGTCAATAAAGATAGCGGATATTTCTGAAGAGATAATTCAGCAAGCAATATTATCTGCTATGAGCATATATAAATTTTCGATAACAGATGATTTAATGAGTATGGCTGTAAATGAACTCATAAAACTGACCAAAATAGAGAATAATGTAGACCTGAATAAATTCACTACTATATGCACAGACGTTCTATCCCCCCGCGTCACCAGACATAATAAAGAAAAAAAAACAAACGACATTCTACCCTTCTCAAAAATCCCCTTTTTAATTTTCATTGAAAAAATGGCAATTGATACTATGAATCCAGGTCATACACATTAA", - "dna_sequence_length": 492, - "id": "CDS_2811", - "location": [ - [ - "NC_000913", - 2990554, - "+", - 396 - ], - [ - "NC_000913", - 2990948, - "+", - 96 - ] - ], - "md5": "597db7cf7e979991510a1414df170d29", - "parent_gene": "", - "protein_md5": "dba1fab0a2c0e8aa60c3b7307e4f4403", - "protein_translation": "MKPRNINNSLPLQPLVPDQENKNKKNEEKSVNPVKITMGSGLNYIEQESLGGKYLTHDLSIKIADISEEIIQQAILSAMSIYKFSITDDLMSMAVNELIKLTKIENNVDLNKFTTICTDVLSPRVTRHNKEKKTNDILPFSKIPFLIFIEKMAIDTMNPGHTH", - "protein_translation_length": 163, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygeG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46787" - ], - [ - "gene_synonym", - "EcoGene:EG13037" - ], - [ - "gene_synonym", - "GeneID:946986" - ], - [ - "gene_synonym", - "ECK2849" - ], - [ - "gene_synonym", - "GI:16130755" - ], - [ - "gene_synonym", - "ASAP:ABE-0009364" - ], - [ - "gene_synonym", - "JW2819" - ], - [ - "gene_synonym", - "NP_417328.1" - ], - [ - "gene_synonym", - "b2851" - ] - ], - "dna_sequence": "ATGAGCACAGAAACAATTGAAATATTCAATAATAGTGATGAATGGGCAAATCAACTAAAACACGCATTATCGAAAGGAGAAAATCTGGCATTACTACATGGTTTAACTCCTGATATCCTTGATAGAATATATGCATATGCATTCGACTACCATGAAAAGGGTAATATAACGGACGCAGAAATTTATTATAAATTCTTGTGCATTTATGCGTTCGAAAATCATGAGTATCTAAAAGATTTTGCATCAGTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCGATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAA", - "dna_sequence_length": 492, - "functions": [ - "SycD-like chaperone family TPR-repeat-containing protein" - ], - "id": "CDS_2812", - "location": [ - [ - "NC_000913", - 2991268, - "+", - 492 - ] - ], - "md5": "90678672da3447583759442e49167d65", - "parent_gene": "", - "protein_md5": "5444ce373fc6777ca03ce5bbf90ff67e", - "protein_translation": "MSTETIEIFNNSDEWANQLKHALSKGENLALLHGLTPDILDRIYAYAFDYHEKGNITDAEIYYKFLCIYAFENHEYLKDFASVCQPKKKYQQAYDLYKLSYNYFPYDDYSVIYRMGQCQIGAKNIDNAMQCFYHIINNCEDDSVKSKAQAYIELLNDNSEDNG", - "protein_translation_length": 163, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2820" - ], - [ - "gene_synonym", - "EcoGene:EG13038" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76639" - ], - [ - "gene_synonym", - "ygeH" - ], - [ - "gene_synonym", - "GI:16130756" - ], - [ - "gene_synonym", - "GeneID:946265" - ], - [ - "gene_synonym", - "NP_417329.1" - ], - [ - "gene_synonym", - "ECK2850" - ], - [ - "gene_synonym", - "b2852" - ], - [ - "gene_synonym", - "ASAP:ABE-0009368" - ] - ], - "dna_sequence": "ATGGACTTAGAAAATAAATTCTCATATCATTTTCTTGAGGGATTAACGCTCACGGAAGATGGAATTCTTACTCAAGGAAATGAGCAAGTTTATATTCCACAGAAAGAGTTAGGTGTATTAATAGTATTACTTGAATCCGCTGGTCATGTTGTACTGAAAGATATGATCATCGAATCAGTATGGAAAAATATTATTGTTAGTGACGAGTCCCTGACAAGATGTATCTATTCTTTGCGCTGCATTTTTGAAAAAATTGGCTATGATCGTTGCATAGAAACAATCTACCGGAAAGGTTATCGTTTCAGCGGGCAGGTTTTCAAAACTAAAATTAATGAAGATAATACTTCAGACTATTCCATAGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGAACTACATAATACATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGCACTTCATGGAAAAAGTGAACTTGAACTTGCTGCTCAAAAAGCATTAGAGCTTTTAGATTATGTATCAGACATAACCACTGTCGATGGAAAAATTTTAGCTATTATGGGACTGATAACTGGTCTGTCTGGACAAGCAAAAGTATCTCATATCTTATTTGAACAGGCTAAGATACACTCAACTGATATAGCCTCTCTCTACTACTATAGGGCACTAGTCCACTTTCATAATGAAAAAATTGAAGAGGCAAGGATTTGTATAGACAAATCACTACAACTCGAACCCAGAAGACGAAAAGCAGTTGTGATAAAAGAATGTGTAGATATGTATGTGCCTAACCCGCTCAAAAACAACATTAAACTCTACTATAAAGAAACTGAGAGTGAAAGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAA", 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"gene_synonym", - "JW5456" - ], - [ - "gene_synonym", - "NP_417330.1" - ], - [ - "gene_synonym", - "GI:16130757" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46789" - ], - [ - "gene_synonym", - "GeneID:947336" - ], - [ - "gene_synonym", - "ECK2851" - ], - [ - "gene_synonym", - "b2853" - ] - ], - "dna_sequence": "ATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGGTGATGAAGTCGTATCATTAGATAAACACATCAACACCAGTGCTACTGATACAGATCAAATACAAGCATTTATAGTTTCAACATGGATGGCGCCTTTTCAAAATGATATGTATTCAGAAGATAATCCTATCTCACCTTACTATAAAATTGAGTGGTAG", - "dna_sequence_length": 219, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2814", - "location": [ - [ - "NC_000913", - 2993638, - "+", - 219 - ] - ], - "md5": "c1382383e4eeb0ab55fabb9f64f274ff", - "parent_gene": "", - "protein_md5": "a4fdacca19ee12edecc3429bc0ecbfcf", - "protein_translation": "MTNPIGINNLSQSSNIANATGDEVVSLDKHINTSATDTDQIQAFIVSTWMAPFQNDMYSEDNPISPYYKIEW", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46790" - ], - [ - "gene_synonym", - "GeneID:947338" - ], - [ - "gene_synonym", - "EcoGene:EG13040" - ], - [ - "gene_synonym", - "ygeJ" - ], - [ - "gene_synonym", - "pbl" - ], - [ - "gene_synonym", - "b2854" - ], - [ - "gene_synonym", - "ECK2852" - ], - [ - "gene_synonym", - "JW5457" - ], - [ - "gene_synonym", - "ASAP:ABE-0009377" - ] - ], - "dna_sequence": "ATGCGCTCACCAAAAGTTAAATTCTTAACCATCTTCACGTTTTGTATATTTATTACAAAAATGTCTTTCGCCAGCAACTCTTGCTCTAATGAAGCAGGAACAATGTTCAGAATCGAACCAAATTTAATTAAAGCTATCGCTCTTGTTGAAAGCAATCTAAAAAAGGATAGCATAGGCAAGAACAGAGATAAGAATAACAATATAAAGAGTTTAGATTATTGGTTAATGCAGATAAACCAGATGCATATTCCCCTGTTAAAAAAACGTGGAATAATAAAAGATGAACGAGATTTGTTAGATAACCCTTGTCTGAACATTAAAATAGGAACCGAGATTTTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAAATATATATTGTATATACCAGGCTTAATGAACTAGACAATCGTAAGGCTTCAGCAAAATGA", - "dna_sequence_length": 504, - "id": "CDS_2815", - "location": [ - [ - "NC_000913", - 2993939, - "+", - 444 - ], - [ - "NC_000913", - 2994382, - "+", - 60 - ] - ], - "md5": "cb28b91f59f7e6182db3c319ff257046", - "parent_gene": "", - "protein_md5": "d9f5c62f097db7a81b493c31858bbfc3", - "protein_translation": "MRSPKVKFLTIFTFCIFITKMSFASNSCSNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKNNNIKSLDYWLMQINQMHIPLLKKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPKIYIVYTRLNELDNRKASAK", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46791" - ], - [ - "gene_synonym", - "EcoGene:EG13041" - ], - [ - "gene_synonym", - "ygeL" - ], - [ - "gene_synonym", - "ygeK" - ], - [ - "gene_synonym", - "GeneID:947332" - ], - [ - "gene_synonym", - "ASAP:ABE-0009379" - ], - [ - "gene_synonym", - "JW5458" - ], - [ - "gene_synonym", - "ASAP:ABE-0009381" - ], - [ - "gene_synonym", - "b2856" - ], - [ - "gene_synonym", - "ECK2853" - ] - ], - "dna_sequence": "ATGGGAAAAATTAAAATTGTAGTTTCAGATCAGCAGCCGTTTATGATTGATGGGATAATTGGATTTCTCGGACATTATCCTGATTTATATGAGGTTGTTGGGGGCTATAAAGATCTGAAGAAAGCTATAGCGGAGTGTAACAAATCTACAGCCTAAATATTTATTTTAGGAGAATTTGCAGGTGGAATGATGGGGGCCGAACTCGTAAAATGGGTTAAATCGCATAAGATAGATGCTCATATTATTACATTTGTAGCAAAGATGCCGTATATTGATTCAATAAAATTGCTTGAAGCAGGTGCGAAAGGATGCGTATGGAAAACCAGTCACCCGGCGAAACTAAATCGTGCTATTGATTCGATTAGTAATGGTTACACTTATTTTGATAGTGTACATATGGATTGTGAAAAAATATCTTCCAGGTATTCCTCTGATAATCAACTTACAAATCGTGAGTCAGAAATATTACAACTCATAGCTGATGGTAAAACAAACAAAGAAATCGCTAATTTCTTGCAGTTAAGCAGGAAAACAGTCGAAACTCATAGACTCAATATCATGAAGAAATTAGATGTTCACAGTGGTATCGAGTTGATCAAAACAGCTTTACGTATGGGTGTTTGCACTATATAA", - "dna_sequence_length": 633, - "id": "CDS_2816", - "location": [ - [ - "NC_000913", - 2995092, - "-", - 633 - ] - ], - "md5": "dc0b03849976b4615b95bc8bd6778299", - "parent_gene": "", - "protein_md5": "a8df795a14d00ed190e7b236aa804d13", - "protein_translation": "MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKSTA", - "protein_translation_length": 51, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:2847705" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46793" - ], - [ - "gene_synonym", - "ygeN" - ], - [ - "gene_synonym", - "ygeM" - ], - [ - "gene_synonym", - "EcoGene:EG13044" - ], - [ - "gene_synonym", - "ASAP:ABE-0009385" - ], - [ - "gene_synonym", - "JW5459" - ], - [ - "gene_synonym", - "ASAP:ABE-0009387" - ], - [ - "gene_synonym", - "b2858" - ], - [ - "gene_synonym", - "ECK2855" - ] - ], - "dna_sequence": "ATGCGAAAAAAAATAGAGATGAGCTTGATAAAATCTCCTGCAAATGGTGTTGTGATTAAAAGAAAAATTTCTGATGGATTGAAAGAAATAGTTTCTCTTAAAGAAAAAATCCTTCTTGAAACCACCGCAAAAATTCAGAGTATTGAGGAAAAGAGAGAAGAAAAATTTATTCAAGGTTATTATGATGGCTATACAAAAGGCATTATTGATGAGATGGATAATTTTATACCCTTGATAAGCTTGCTATGCTCAGAACTTGAAAAAAAAAGAATAAACATGATAAACGATCTGAAGAGTATATTGTTAAAACCTTCAGAAGAAGTTGATGTTTTTATCAAAATTTTTGAAAGTTGGGTAACAAAATTACCATCAATATCAGGTCCTGTAAATCTCCATATACCTACCAGTTTCAAAGATAAGTCTCTTGAAGTAGAGTCATATTTTGTCGACAAATCAATATGGAATGTCCATATTACATTTCATGATGATAAGCGTTTTGTGTTTTTTACCGATCAATTTATTGCTGAATTTAGTCCGCAGGAATTTGTGGATAATTGTGAGCAATATTTAATTAATAATCATTGTTTCTCCCCTGACAAGGTTAACGAAATCTGCGAACAAGCCAGACATTATTTAGTTGAAAAAATGTTTGAAACACATTCTTTGGATATGAATAATTCTGTTTTGGCAAGCCCTGAGGACTTATAG", - "dna_sequence_length": 708, - "id": "CDS_2817", - "location": [ - [ - "NC_000913", - 2996020, - "-", - 261 - ], - [ - "NC_000913", - 2995760, - "-", - 447 - ] - ], - "md5": "082ed0374c2956dddfc50c2b38d13dd1", - "parent_gene": "", - "protein_md5": "54ce3f8c9af82c646e2c9137a7dc0e15", - "protein_translation": "MRKKIEMSLIKSPANGVVIKRKISDGLKEIVSLKEKILLETTAKIQSIEEKREEKFIQGYYDGYTKGIIDEMDNFIPLISLLCSELEKKRINMINDLKSILLKPSEEVDVFIKIFESWVTKLPSISGPVNLHIPTSFKDKSLEVESYFVDKSIWNVHITFHDDKRFVFFTDQFIAEFSPQEFVDNCEQYLINNHCFSPDKVNEICEQARHYLVEKMFETHSLDMNNSVLASPEDL", - "protein_translation_length": 235, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46795" - ], - [ - "gene_synonym", - "ygeO" - ], - [ - "gene_synonym", - "b2859" - ], - [ - "gene_synonym", - "EcoGene:EG13045" - ], - [ - "gene_synonym", - "GeneID:947325" - ], - [ - "gene_synonym", - "JW5846" - ], - [ - "gene_synonym", - "ASAP:ABE-0009390" - ], - [ - "gene_synonym", - "ECK2857" - ] - ], - "dna_sequence": "ATAAACAATTGGAATTTACTTCCATTGATCTGTTTACTCAGTGGTTGTCACTTTTATCGAGAAAGGTTTGCAGAACGCGGGTTTTTTTATAAGGTTCCTGATGTACTAAGGGATTATTTATCAGCTATACCGCTGGAAATAAATGAAAAGGCACGATACAAACCCGGCATCGCTAACTATCACAATATCATCACATGTGGTTTTTCAACGTTGTTACCCTATATAAGGCAACAACCATTGGCAATGCAGCAACGATTTAATTTATTATTTCCTGATTTTGTTGACCACATACAATCGCCGTTACCACTTGCATCAACACTTTTAGAGAGAATTACATTTTATGCGAAAAAAAATAGAGATGAGCTTGATAAAATCTCCTGCAAATGGTGTTGTGATTAA", - "dna_sequence_length": 399, - "id": "CDS_2818", - "location": [ - [ - "NC_000913", - 2996360, - "-", - 399 - ] - ], - "md5": "2249a911deedd913d6e0e3935385278a", - "parent_gene": "", - "protein_md5": "9ca04de566e83246e2ef3926755124b0", - "protein_translation": "INNWNLLPLICLLSGCHFYRERFAERGFFYKVPDVLRDYLSAIPLEINEKARYKPGIANYHNIITCGFSTLLPYIRQQPLAMQQRFNLLFPDFVDHIQSPLPLASTLLERITFYAKKNRDELDKISCKWCCD", - "protein_translation_length": 132, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF56" - ], - [ - "gene_synonym", - "EcoGene:EG40004" - ], - [ - "gene_synonym", - "GI:16130763" - ], - [ - "gene_synonym", - "GeneID:947346" - ], - [ - "gene_synonym", - "ASAP:ABE-0009395" - ], - [ - "gene_synonym", - "ECK0358" - ], - [ - "gene_synonym", - "NP_417337.1" - ], - [ - "gene_synonym", - "insD1" - ], - [ - "gene_synonym", - "b2860" - ] - ], - "dna_sequence": "GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG", - "dna_sequence_length": 906, - "functions": [ - "IS2 transposase TnpB" - ], - "id": "CDS_2819", - "location": [ - [ - "NC_000913", - 2997277, - "-", - 906 - ] - ], - "md5": "d7a869f3d04f69c9bbc5e3da4131ca74", - "parent_gene": "", - "protein_md5": "e9d0a5629c6cb4141f55451e6130cec7", - "protein_translation": "MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI", - "protein_translation_length": 301, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "insC1" - ], - [ - "gene_synonym", - "GI:145698306" - ], - [ - "gene_synonym", - "NP_417338.3" - ], - [ - "gene_synonym", - "EcoGene:EG40003" - ], - [ - "gene_synonym", - "ASAP:ABE-0009397" - ], - [ - "gene_synonym", - "GeneID:947347" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF43" - ], - [ - "gene_synonym", - "b2861" - ], - [ - "gene_synonym", - "ECK0357" - ] - ], - "dna_sequence": "ATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAA", - "dna_sequence_length": 366, - "functions": [ - "IS2 repressor TnpA" - ], - "id": "CDS_2820", - "location": [ - [ - "NC_000913", - 2997600, - "-", - 366 - ] - ], - "md5": "9ed51bec276857ffa1620cbb329c920f", - "parent_gene": "", - "protein_md5": "2766fdd4e9e285df2a70f8c10f901f65", - "protein_translation": "MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46797" - ], - [ - "gene_synonym", - "EcoGene:EG13047" - ], - [ - "gene_synonym", - "ECK2858" - ], - [ - "gene_synonym", - "ASAP:ABE-0009401" - ], - [ - "gene_synonym", - "ygeQ" - ], - [ - "gene_synonym", - "ygeP" - ], - [ - "gene_synonym", - "b2863" - ], - [ - "gene_synonym", - "JW2831" - ], - [ - "gene_synonym", - "GeneID:947344" - ], - [ - "gene_synonym", - "ASAP:ABE-0009399" - ] - ], - "dna_sequence": "ATGAAAGGGAAATCTGCATTAACTCTTCTGCTCGCTGGTATATTTTCGTGCGGCACATGCCAGGCGACAGGGGCAGAAGTGACGAGTGAATCTGTATTTAACATTCTTAATTCCACGGGGGCAGCAACAGATAAAAGTTATTTATCGTTAAATCCAGATAAGTATCCTAATTATCGTCTTCTGATTCACTCAGCCAAATTACAAAATGAAATAAAGAGCCACTATACCAAAGACGAAATTCAAGGATTGCTAACATTAACAGAAAACACACGAAAGTTAACGTTGACGGAGAAACCCTGGGGAACGTTTATTCTTGCTTCTACTTTCGAAGATGACAAAACAGCGGCAGAAACCCACTATGATGCTGTCTGGTTGAGGGATAGTTTATGGGGCTATATGGCATTAGTATCAGATCAGGGAAATAGTGTAGCCGCAAAAAAGGTTCTGCTCACCCTGTGGGATTATATGTCTACGCCCGACCAGATTAAGCGGATGCAGGACGTCATTAGCAACCCAAAACGACTGGATGGAATTCCCGTGCAAATGAATGCTGTGCATATCCGATTTGACAGCAACTCCCCCGTGATGGCAGATGTGCAGGAAGAAGGCAAGCCGCAGCTGTGGAACCATAAACAAAATGATGCTTTAGGTCTTTACCTTGATCTCCTTATACAAGCAATCAACACTGGTACTATTAACGCTGAAGATTGGCAAAAAGGTGACCGATTAAAGTCGGTTGCGCTGCTGATTGCTTATCTGGATAAAGCCAATTTCTATGTTATGGAAGATTCCTGAGCATGGGAAGAAGATGCCCGATTAAACACATCTTCCGTTGCACTGGTGACCTCTGGACTGGAACGTTTGTCAAACCTACTCTCGAAGAAAGACTCTGTTTTTGTCTCTGATTTACTACGCGAAGCTAAAGTCAATGAACTGGATGAAACTCTTTCAACAACGAGGTTGAACCACCTCATAGATAAAGGTTATGAAAGAATAACGTTACAGCTTGATTTAGGGGGAGAATCCCCAGGTTATCTGGAAAAAGATAAACATTACAGAGAAGCCGATGCGGCTTTACTTAATGTTATTTATCCTACAAATCTTTCAAAGATAAACACCAGAAGAAAAGAGCAAGTT", 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[ - "gene_synonym", - "GeneID:947352" - ] - ], - "dna_sequence": "TTGAGTGCGGGACGCCTGAATAAAAAATCTCTGGGTATCGTGATGTTGTTATCGGTTGGACTGCTTTTGGCGGGCTGTTCGGGTAGCAAATCATCCGATACAGGAACGTATTCCGGCTCCGTTTACACCGTGAAACGGGGGGATACGCTATATCGTATTTCGCGCACCACGGGAACCAGCGTAAAAGAACTGGCGCGACTGAACGGCATTTCCCCCCCTTACACCATTGAAGTTGGTCAGAAACTAAAACTGGGTGGGGCGAAAAGTAGCAGTATTACACGTAAATCAACCGCCAAATCAACGACCAAAACCGCATCGGTTACACCGTCATCAGCGGTACCGAAATCATCCTGGCCGCCAGTAGGGCAACGTTGTTGGTTATGGCCAACGACAGGGAAAGTTATCATGCCGTATTCGACAGCAGATGGCGGCAATAAAGGGATTGATATCTCAGCTCCACGGGGTACACCTATTTACGCCGCGGGTGCAGGAAAGGTGGTGTATGTGGGCAACCAGCTGCGTGGCTACGGTAATCTCATCATGATTAAACACAGTGAAGATTACATTACGGCTTACGCCCATAATGACACGATGCTGGTAAATAATGGGCAAAGCGTGAAGGCTGGGCAAAAAATCGCCACTATGGGGAGCACGGATGCGGCATCTGTTCGCCTGCATTTCCAGATTCGTTACCGTGCAACGGCAATTGATCCGCTACGTTACTTGCCGCCTCAGGGCAGCAAGCCAAAATGCTGA", - "dna_sequence_length": 756, - "functions": [ - "LysM domain-containing M23 family putative peptidase", - "septation lipoprotein" - ], - "id": "CDS_2822", - "location": [ - [ 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"dna_sequence": "ATGCGCGTCGATGCCATTGCTAAGGTCACCGGGCGGGCACGATATACTGACGATTATGTTATGGCGGGCATGTGTTATGCGAAATATGTACGTAGCCCTATCGCACATGGTTATGCCGTAAGTATTAATGATGAACAAGCCAGAAGTTTGCCGGGCGTACTGGCGATTTTTACCTGGGAAGATGTGCCTGATATTCCATTCGCTACAGCTGGGCATGCCTGGACACTTGACGAAAACAAGCGCGATACCGCCGATCGCGCACTGCTAACTCGCCATGTTCGTCATCATGGTGACGCCGTTGCCATCGTCGTGGCCCGCGATGAACTCACGGCAGAAAAAGCGGCGCAATTGGTCAGCATTGAGTGGCAAGAATTACCCGTTATCACCACGCCAGAAGCGGCGCTGGCAGAAGACGCTGCACCAATCCATAACGGTGGCAATTTACTGAAACAAAGCACGATGTCGACGGGTAATGTCCAACAAACAATCGATGCCGCCGACTACCAGGTACAGGGGCACTATCAGACCCCCGTTATTCAACATTGTCACATGGAAAGCGTAACATCGCTGGCGTGGATGGAGGATGACTCGCGAATTACCATCGTTTCCAGCACCCAGATCCCGCACATTGTTCGCCGCGTGGTTGGTCAGGCGCTGGATATTCCCTGGTCATGCGTACGAGTCATCAAACCATTTGTCGGTGGCGGTTTTGGTAATAAACAGGATGTACTGGAAGAGCCAATGGCGGCATTCCTGACCAGCAAGCTTGGCGGCATTCCGGTGAAAGTTTCCCTTAGCCGTGAAGAGTGTTTCCTCGCAACCCGTACCCGCCACGCTTTTACCATTGACGGGCAAATGGGCGTGAACCGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCGGGGGGGAATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGCGTGGTTATGGCGCGCCACAAGTCGTATTTGCCGTTGAGTCTATGCTTGATGACGCCGCGACAGCGTTAGGTATTGATCCTGTTGAAATTCGTTTACGCAACGCCGCCCGCGAAGGAGATGCTAATCCGCTCACGGGCAAACGTATTTACAGCGCAGGGTTGCCGGAGTGTCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGGCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAGGGTGCCGACACCGTCTTCTCGCAAATGGTGGCAGAAACCGTGGGGGTTCCGGTCAGCGACGTTCGCGTTATTTCAACTCAAGATACCGACGTTACGCCGTTCGATCCCGGCGCATTTGCCTCACGCCAGAGCTATGTTGCCGCGCCTGCGCTGCGCAGTGCGGCACTATTATTAAAAGAGAAAATCATCGCTCACGCCGCAGTCATGCTACATCAGTCAGCGATGAATCTGACCCTGATAAAAGGCCATATCGTGCTGGTTGAACGACCGGAAGAGCCGTTAATGTCGTTAAAAGATTTGGCGATGGACGCTTTCTACCACCCTGAACGCGGCGGGCAGCTCTCTGCTGAAAGCTCCATCAAAACCACCACTAACCCACCGGCGTTTGGCTGTACCTTTGTTGATCTGACGGTCGATATTGCGCTGTGCAAAGTCACCATCAACCGCATCCTCAACGTTCATGATTCAGGGCATATTCTTAATCCACTGCTGGCAGAAGGTCAGGTACACGGCGGAATGGGAATGGGCATTGGCTGGGCGCTATTTGAAGAGATGATCATCGATGCTAAAAGCGGCGTGGTCCGTAACCCCAATCTGCTGGATTACAAAATGCCGACCATGCCGGATCTGCCACAACTGGAAAGCGCGTTCGTCGAAATCAATGAGCCGCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGGTGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGAAGAGTTCCATCTGGCAGGATTGATTTGA", - "dna_sequence_length": 2259, - "functions": [ - "xanthine dehydrogenase, molybdenum binding subunit" - ], - "id": "CDS_2823", - "location": [ - [ - "NC_000913", - 3000345, - "+", - 2259 - ] - ], - "md5": "f381727c31a4939ad3bf7cc38419fa12", - "parent_gene": "", - "protein_md5": "4d5592d0f9c871026a5a07b6b7a516fa", - "protein_translation": "MRVDAIAKVTGRARYTDDYVMAGMCYAKYVRSPIAHGYAVSINDEQARSLPGVLAIFTWEDVPDIPFATAGHAWTLDENKRDTADRALLTRHVRHHGDAVAIVVARDELTAEKAAQLVSIEWQELPVITTPEAALAEDAAPIHNGGNLLKQSTMSTGNVQQTIDAADYQVQGHYQTPVIQHCHMESVTSLAWMEDDSRITIVSSTQIPHIVRRVVGQALDIPWSCVRVIKPFVGGGFGNKQDVLEEPMAAFLTSKLGGIPVKVSLSREECFLATRTRHAFTIDGQMGVNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGNKVAYLYPRCAYAYSSKTCYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEIRLRNAAREGDANPLTGKRIYSAGLPECLEKGRKIFEWEKRRAECQNQQGNLRRGVGVACFSYTSNTWPVGVEIAGARLLMNQDGTINVQSGATEIGQGADTVFSQMVAETVGVPVSDVRVISTQDTDVTPFDPGAFASRQSYVAAPALRSAALLLKEKIIAHAAVMLHQSAMNLTLIKGHIVLVERPEEPLMSLKDLAMDAFYHPERGGQLSAESSIKTTTNPPAFGCTFVDLTVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDAKSGVVRNPNLLDYKMPTMPDLPQLESAFVEINEPQSAYGHKSLGEPPIIPVAAAIRNAVKMATGVAINTLPLTPKRLYEEFHLAGLI", - "protein_translation_length": 752, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130769" - ], - [ - "gene_synonym", - "xdhB" - ], - [ - "gene_synonym", - "EcoGene:EG13050" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46800" - ], - [ - "gene_synonym", - "ygeT" - ], - [ - "gene_synonym", - "ASAP:ABE-0009416" - ], - [ - "gene_synonym", - "NP_417343.1" - ], - [ - "gene_synonym", - "b2867" - ], - [ - "gene_synonym", - "JW2835" - ], - [ - "gene_synonym", - "GeneID:947205" - ], - [ - "gene_synonym", - "ECK2863" - ] - ], - "dna_sequence": "ATGTTTGATTTTGCTTCTTACCATCGCGCAGCAACCCTTGCCGATGCCATCAACCTGCTGGCTGACAACCCGCAGGCCAAACTGCTCGCCGGTGGCACTGACGTACTGATTCAGCTCCACCATCACAATGACCGTTATCGCCATATTGTTGATATTCATAATCTGGCGGAGCTGCGGGGAATTACGCTGGCGGAAGATGGCTCGCTACGTATCGGCTCTGCAACGACATTTACCCAGCTAATAGAAGATCCTATAACTCAACGTCATCTCCCGGCGTTATGTGCTGCGGCCACGTCCATTGCTGGACCGCAGATCCGTAACGTCGCTACCTACGGTGGAAATATTTGCAACGGTGCCACCAGCGCAGATTCTGCCACGCCAACGCTAATTTATGACGCGAAACTGGAGATCCACTCCCCGCGCGGTGTTCGTTTCGTCCCGATTAATGGCTTTCACACCGGGCCGGGCAAAGTGTCTCTTGAGCATGACGAAATCCTCGTCGCCTTTCATTTTCCGCCACAGCCGAAAGAACACGCGGGCAGCGCGCATTTTAAATATGCCATGCGCGACGCAATGGATATTTCAACGATTGGCTGCGCCGCACATTGCCGACTGGATAACGGCAATTTCAGCGAATTACGCCTGGCATTTGGTGTTGCCGCGCCAACGCCGATTCGCTGCCAACATGCCGAACAGACTGCACAAAATGCGCCATTAAACCTGCAAACGCTGGAAGCTATCAGCGAATCTGTCCTGCAAGATGTCGCCCCGCGTTCTTCATGGCGGGCCAGTAAAGAGTTTCGTCTGCATCTCATCCAGACGATGACCAAAAAAGTGATTAGCGAAGCCGTCGCCGCGGCGGGGGGAAAATTGCAATGA", - "dna_sequence_length": 879, - "functions": [ - "xanthine dehydrogenase, FAD-binding subunit" - ], - "id": "CDS_2824", - "location": [ - [ - "NC_000913", - 3002614, - "+", - 879 - ] - ], - "md5": "e71ac59fd1ad7e0d0fc40d46236aa2b2", - "parent_gene": "", - "protein_md5": "6528f59616cd448ec93bb8144736b039", - "protein_translation": "MFDFASYHRAATLADAINLLADNPQAKLLAGGTDVLIQLHHHNDRYRHIVDIHNLAELRGITLAEDGSLRIGSATTFTQLIEDPITQRHLPALCAAATSIAGPQIRNVATYGGNICNGATSADSATPTLIYDAKLEIHSPRGVRFVPINGFHTGPGKVSLEHDEILVAFHFPPQPKEHAGSAHFKYAMRDAMDISTIGCAAHCRLDNGNFSELRLAFGVAAPTPIRCQHAEQTAQNAPLNLQTLEAISESVLQDVAPRSSWRASKEFRLHLIQTMTKKVISEAVAAAGGKLQ", - "protein_translation_length": 292, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417344.1" - ], - [ - "gene_synonym", - "xdhC" - ], - [ - "gene_synonym", - "EcoGene:EG13051" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46801" - ], - [ - "gene_synonym", - "GeneID:945148" - ], - [ - "gene_synonym", - "GI:16130770" - ], - [ - "gene_synonym", - "ASAP:ABE-0009418" - ], - [ - "gene_synonym", - "ygeU" - ], - [ - "gene_synonym", - "b2868" - ], - [ - "gene_synonym", - "ECK2864" - ], - [ - "gene_synonym", - "JW2836" - ] - ], - "dna_sequence": "ATGAATCACAGCGAAACAATTACCATCGAATGCACCATTAACGGGATGCCTTTTCAGCTTCACGCCGCACCAGGCACGCCGCTCTCGGAATTACTCCGCGAACAAGGACTGCTAAGTGTCAAACAAGGGTGCTGCGTGGGTGAATGTGGTGCCTGTACGGTGTTGGTCGACGGCACAGCAATAGACAGTTGCTTATACCTTGCCGCCTGGGCTGAAGGAAAAGAGATCCGCACGCTGGAAGGTGAAGCGAAAGGCGGAAAACTTTCTCATGTTCAGCAGGCTTATGCGAAATCCGGCGCAGTGCAGTGCGGGTTTTGTACGCCTGGCCTGATTATGGCTACCACGGCAATGCTGGCGAAACCACGCGAGAAGCCATTAACCATTACGGAAATTCGTCGCGGACTGGCGGGAAATCTTTGTCGCTGCACGGGGTATCAGATGATTGTAAATACAGTTCTGGATTGCGAGAAAACGAAGTAA", - "dna_sequence_length": 480, - "functions": [ - "xanthine dehydrogenase, Fe-S binding subunit" - ], - "id": "CDS_2825", - "location": [ - [ - "NC_000913", - 3003489, - "+", - 480 - ] - ], - "md5": "508fd45e284a5ce8fbfffa9f19bc3269", - "parent_gene": "", - "protein_md5": "da56fd2cd0e2aaf487fb52906eeb8498", - "protein_translation": "MNHSETITIECTINGMPFQLHAAPGTPLSELLREQGLLSVKQGCCVGECGACTVLVDGTAIDSCLYLAAWAEGKEIRTLEGEAKGGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLDCEKTK", - "protein_translation_length": 159, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13052" - ], - [ - "gene_synonym", - "GeneID:947320" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46802" - ], - [ - "gene_synonym", - "NP_417345.1" - ], - [ - "gene_synonym", - "ygeV" - ], - [ - "gene_synonym", - "b2869" - ], - [ - "gene_synonym", - "ASAP:ABE-0009420" - ], - [ - "gene_synonym", - "ECK2865" - ], - [ - "gene_synonym", - "GI:16130771" - ], - [ - "gene_synonym", - "JW2837" - ] - ], - "dna_sequence": "ATGGAGCTTGCTACTACGCAGTCAGTATTGATGCAAATTCAACCGACAATTCAGCGTTTTGCCAGAATGCTTGCCAGCGTTTTGCAGCTTGAGGTTGAGATCGTTGATGAAAACTTGTGTCGCGTTGCCGGAACGGGCGCGTATGGGAAGTTTCTTGGTCGCCAGTTGAGCGGCAACTCACGCCTGCTCCGCCACGTCCTGGAAACGAAAACTGAAAAAGTTGTGACACAGTCTCGCTTCGATCCCCTTTGCGAAGGTTGCGATAGTAAAGAAAATTGCCGCGAAAAAGCATTTCTGGGTACGCCTGTCATTTTACAGGATCGTTGTGTTGGGGTGATAAGTTTGATTGCCGTTACCCACGAGCAACAAGAGCATATCAGTGATAATTTACGCGAATTTTCTGATTATGTTCGCCATATATCCACCATTTTTGTTTCGAAACTTCTGGAGGATCAGGGGCCAGGAGATAACATCAGTAAAATATTTGCGACCATGATCGATAATATGGATCAGGGCGTATTAGTTGTAGATGATGAAAATCGGGTTCAGTTTGTTAATCAGACTGCCTTAAAAACACTTGGTGTTGTGCAAAATAATATTATTGGGAAACCTATCCGTTTCAGACCATTAACATTTGAGAGTAATTTTACCCATGGACATATGCAGCATATTGTTTCATGGGACGATAAAAGTGAATTAATCATTGGTCAATTGCATAACATTCAGGGCCGACAATTATTTTTAATGGCGTTTCACCAATCGCATACCAGTTTTTCTGTAGCAAATGCACCTGATGAACCGCATATTGAACAATTGGTTGGCGAGTGCCGTGTTATGCGGCAATTAAAACGACTCATTAGCCGTATTGCACCCAGCCCATCCAGCGTTATGGTGGTTGGTGAAAGCGGCACGGGTAAAGAAGTCGTCGCCCGTGCAATCCATAAGTTGAGCGGAAGACGGAATAAACCCTTTATTGCTATCAACTGTGCCGCGATTCCGGAGCAGCTTCTGGAGAGCGAACTGTTCGGTTATGTTAAAGGTGCATTTACTGGCGCTTCTGCCAACGGTAAAACAGGGTTGATTCAGGCGGCGAATACGGGCACGCTGTTTCTCGATGAAATAGGTGATATGCCATTAATGTTGCAGGCTAAATTACTGCGCGCTATTGAGGCACGTGAAATTCTGCCGATTGGTGCCAGTAGCCCAATACAAGTCGACATTCGCATCATTTCTGCAACTAATCAGAATTTGGCCCAGTTCATTGCCGAAGGTAAATTCCGCGAAGATCTCTTCTACCGACTTAATGTTATCCCGATAACTCTGCCACCGCTGCGTGAACGTCAGGAAGATATTGAACTATTGGTGCATTACTTTTTACATCTGCATACCCGTCGTCTGGGATCGGTTTATCCTGGCATTGCTCCCGATGTCGTCGAAATATTGCGTAAGCATCGTTGGCCCGGAAACCTGCGCGAGTTAAGCAATTTGATGGAATATCTGGTTAACGTGGTTCCTTCAGGTGAAGTTATCGACAGCACGCTATTGCCGCCAAATCTGCTGAATAATGGCACAACGGAGCAAAGTGATGTAACAGAGGTCAGTGAGGCGCACCTGTCACTCGATGATGCGGGCGGCACGGCGCTGGAGGAGATGGAAAAGCAAATGATCCGCGAGGCGCTTTCACGTCATAACAGCAAGAAGCAAGTTGCTGATGAACTGGGCATCGGCATTGCTACGCTCTATCGCAAGATTAAGAAATATGAGTTGTTAAACACATAA", - "dna_sequence_length": 1779, - "functions": [ - "putative sigma-54-interacting transcriptional activator" - ], - "id": "CDS_2826", - "location": [ - [ - "NC_000913", - 3005786, - "-", - 1779 - ] - ], - "md5": "9d82487917d5e075d11587bca90d740d", - "parent_gene": "", - "protein_md5": "c0855d46cd42c4a166fb830f6e184840", - "protein_translation": "MELATTQSVLMQIQPTIQRFARMLASVLQLEVEIVDENLCRVAGTGAYGKFLGRQLSGNSRLLRHVLETKTEKVVTQSRFDPLCEGCDSKENCREKAFLGTPVILQDRCVGVISLIAVTHEQQEHISDNLREFSDYVRHISTIFVSKLLEDQGPGDNISKIFATMIDNMDQGVLVVDDENRVQFVNQTALKTLGVVQNNIIGKPIRFRPLTFESNFTHGHMQHIVSWDDKSELIIGQLHNIQGRQLFLMAFHQSHTSFSVANAPDEPHIEQLVGECRVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPEQLLESELFGYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIEAREILPIGASSPIQVDIRIISATNQNLAQFIAEGKFREDLFYRLNVIPITLPPLRERQEDIELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYLVNVVPSGEVIDSTLLPPNLLNNGTTEQSDVTEVSEAHLSLDDAGGTALEEMEKQMIREALSRHNSKKQVADELGIGIATLYRKIKKYELLNT", - "protein_translation_length": 592, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_026185.1" - ], - [ - "gene_synonym", - "b2870" - ], - [ - "gene_synonym", - "EcoGene:EG13053" - ], - [ - "gene_synonym", - "GeneID:945826" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46803" - ], - [ - "gene_synonym", - "ygeW" - ], - [ - "gene_synonym", - "JW5463" - ], - [ - "gene_synonym", - "GI:49176276" - ], - [ - "gene_synonym", - "ECK2866" - ], - [ - "gene_synonym", - "ASAP:ABE-0009425" - ] - ], - "dna_sequence": "ATGATGAAAACTGTTAATGAGCTGATTAAGGATATCAATTCGCTGACCTCTCACCTTCACGAGAAAGATTTTTTGTTAACGTGGGAACAGACGCCAGATGAACTGAAACAAGTACTGGACGTTGCCGCAGCATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGTACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCGAAACCGTGCGTGAAACCGCCAATATGATCTCCTTCTGCGCCGACGCTATTGGTATTCGCGACGATATGTATCTGGGCGCAGGCAACGCCTATATGCGTGAAGTTGGCGCTGCACTTGATGACGGTTACAAGCAGGGTGTACTGCCACAGCGTCCGGCTTTAGTGAACCTGCAATGCGATATTGACCACCCGACTCAGTCAATGGCTGACCTCGCGTGGTTACGTGAACACTTTGGTTCACTGGAAAACCTGAAAGGTAAAAAAATCGCCATGACCTGGGCCTACTCTCCAAGCTATGGCAAACCGCTCTCTGTACCACAAGGCATCATCGGTCTGATGACTCGCTTCGGTATGGATGTCACCCTGGCCCATCCGGAAGGCTACGACCTGATCCCGGATGTGGTTGAAGTGGCGAAAAACAATGCTAAAGCCTCCGGTGGTAGCTTCCGTCAGGTCACCAGCATGGAAGAAGCCTTCAAAGACGCAGACATCGTTTATCCGAAGTCATGGGCACCTTACAAAGTGATGGAAGAGCGTACTGAATTGCTGCGTGCGAACGATCACGAAGGCTTAAAAGCACTGGAAAAACAGTGTCTGGCACAGAACGCGCAACACAAAGACTGGCATTGTACTGAAGAGATGATGGAACTGACCCGTGATGGCGAAGCCCTGTACATGCACTGCCTGCCAGCTGATATCAGCGGCGTATCCTGTAAAGAAGGTGAAGTGACTGAAGGCGTATTCGAAAAATACCGTATCGCTACCTACAAAGAAGCCAGCTGGAAGCCTTATATCATCGCCGCGATGATCCTGTCCCGTAAATACGCCAAACCAGGTGCACTGCTCGAGCAACTGCTGAAAGAAGCGCAAGAACGCGTGAAATAA", - "dna_sequence_length": 1191, - "functions": [ - "putative carbamoyltransferase" - ], - "id": "CDS_2827", - "location": [ - [ - "NC_000913", - 3006262, - "+", - 1191 - ] - ], - "md5": "a875bb3d0d90d05b69d4f18a50994707", - "parent_gene": "", - "protein_md5": "77bdf7f72ab2f675745beea848f0151b", - "protein_translation": "MMKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAALKALRAENISTKVFNSGLGISVFRDNSTRTRFSYASALNLLGLAQQDLDEGKSQIAHGETVRETANMISFCADAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQSMADLAWLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEERTELLRANDHEGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHCLPADISGVSCKEGEVTEGVFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQERVK", - "protein_translation_length": 396, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13054" - ], - [ - "gene_synonym", - "b2871" - ], - [ - "gene_synonym", - "ASAP:ABE-0009428" - ], - [ - "gene_synonym", - "GeneID:947012" - ], - [ - "gene_synonym", - "GI:16130773" - ], - [ - "gene_synonym", - "JW2839" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P66899" - ], - [ - "gene_synonym", - "ECK2867" - ], - [ - "gene_synonym", - "NP_417347.1" - ], - [ - "gene_synonym", - "ygeX" - ] - ], - "dna_sequence": "ATGTCCGTTTTCTCATTGAAGATTGATATCGCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTGGACGATCTCGCAAACCTTTTTGGTGTGAAGAAAATTCTCGTCAAAGACGAATCAAAACGATTCGGTCTGAACGCCTTCAAAATGCTTGGCGGTGCGTACGCCATCGCTCAATTATTGTGTGAAAAATATCATCTTGATATCGAAACGCTGTCATTTGAGCACCTGAAAAATGCCATCGGCGAAAAAATGACTTTCGCGACCACCACCGACGGCAACCACGGGCGCGGTGTGGCGTGGGCAGCACAGCAACTCGGACAGAATGCGGTGATTTACATGCCGAAAGGTTCTGCTCAGGAACGCGTTGACGCCATTCTGAACCTCGGTGCCGAGTGCATCGTCACGGATATGAACTATGACGATACCGTTCGCCTGACCATGCAACACGCGCAGCAGCACGGCTGGGAAGTGGTACAGGACACGGCATGGGAAGGTTACACCAAAATCCCAACCTGGATCATGCAAGGCTACGCAACCCTGGCAGATGAAGCCGTCGAGCAAATGCGTGAAATGGGCGTAACCCCGACGCACGTTCTGCTGCAAGCCGGTGTCGGAGCAATGGCCGGTGGTGTGCTGGGTTATCTGGTCGACGTCTATAGCCCGCAAAATCTGCACAGCATTATTGTTGAACCTGACAAAGCTGACTGTATTTATCGCTCCGGCGTCAAAGGCGACATCGTCAACGTTGGCGGTGATATGGCCACCATCATGGCAGGCCTGGCCTGTGGCGAACCTAACCCGCTGGGCTGGGAAATCCTACGTAACTGCGCCACCCAATTCATCTCCTGCCAGGACAGCGTTGCCGCATTAGGTATGCGCGTGCTGGGTAATCCGTACGGCAACGACCCGCGCATCATCTCCGGTGAATCCGGCGCTGTCGGTTTGGGCGTTCTCGCAGCGGTTCATTATCACCCGCAACGTCAAAGCCTGATGGAAAAACTGGCGCTGAACAAAGATGCCGTGGTGCTGGTTATCAGCACTGAAGGCGACACCGACGTGAAGCACTACCGCGAAGTTGTCTGGGAAGGCAAACACGCTGTAGCACCTTAA", - "dna_sequence_length": 1197, - "functions": [ - "2,3-diaminopropionate ammonia lyase, PLP-dependent" - ], - "id": "CDS_2828", - "location": [ - [ - "NC_000913", - 3007510, - "+", - 1197 - ] - ], - "md5": "711da61e30ef721f6a856d8b47b15fef", - "parent_gene": "", - "protein_md5": "26909ae862b272187e42c0b14a1c15d3", - "protein_translation": "MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRPTPLCALDDLANLFGVKKILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIVNVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRIISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVISTEGDTDVKHYREVVWEGKHAVAP", - "protein_translation_length": 398, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2840" - ], - [ - "gene_synonym", - "EcoGene:EG13055" - ], - [ - "gene_synonym", - "b2872" - ], - [ - "gene_synonym", - "GI:16130774" - ], - [ - "gene_synonym", - "ASAP:ABE-0009434" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P65807" - ], - [ - "gene_synonym", - "ECK2868" - ], - [ - "gene_synonym", - "NP_417348.1" - ], - [ - "gene_synonym", - "GeneID:947360" - ], - [ - "gene_synonym", - "ygeY" - ] - ], - "dna_sequence": "ATGGCTAAGAATATTCCATTCAAACTGATTCTTGAAAAAGCAAAAGATTACCAGGCGGATATGACTCGCTTCCTGCGCGACATGGTTGCTATTCCCAGTGAAAGCTGCGACGAGAAACGCGTAGTACATCGTATTAAAGAAGAGATGGAAAAAGTCGGCTTCGATAAAGTTGAAATCGACCCGATGGGCAACGTTCTCGGTTATATCGGCCACGGCCCGCGTCTGGTGGCAATGGACGCTCATATCGATACCGTCGGCATTGGCAACATCAAAAACTGGGACTTCGATCCGTACGAAGGCATGGAAACTGATGAACTGATTGGTGGTCGCGGTACTTCCGACCAGGAAGGTGGCATGGCCTCTATGGTTTATGCCGGTAAAATCATTAAAGACCTCGGTCTGGAAGATGAATATACCCTGCTGGTTACCGGTACGGTGCAGGAAGAAGACTGCGACGGTCTGTGCTGGCAGTACATTATTGAACAATCCGGCATTCGCCCGGAATTTGTGGTCAGTACCGAACCAACCGACTGCCAGGTATACCGTGGTCAGCGCGGTCGTATGGAAATTCGTATTGATGTTCAGGGTGTTAGCTGCCACGGTTCTGCACCAGAACGCGGTGATAACGCCATTTTCAAAATGGGTCCGATTCTTGGCGAATTACAAGAACTCTCCCAACGTCTGGGTTATGACGAATTCCTCGGCAAAGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAACCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTACCCAACCGAATGCTACTTCCCGACCTGGAAAGTGGAAGAAGATCACTTCACCGTTAAAGCACTGGTGAATGCCTACGAAGGGCTGTTTGGCAAAGCGCCGGTTGTTGATAAGTGGACCTTCTCAACTAACGGCGTATCTATCATGGGCCGTCACGGCATTCCGGTGATCGGCTTTGGCCCGGGTAAAGAACCTGAAGCGCATGCACCTAACGAAAAAACCTGGAAATCTCACCTGGTGACCTGTGCCGCGATGTACGCTGCAATCCCGTTAAGCTGGCTGGCAACAGAGTAA", - "dna_sequence_length": 1212, - "functions": [ - "putative peptidase" - ], - "id": "CDS_2829", - "location": [ - [ - "NC_000913", - 3008764, - "+", - 1212 - ] - ], - "md5": "b2139d142295b739d3e3e2deeeabce0a", - "parent_gene": "", - "protein_md5": "56ef52fc84e708556588dd43eb465591", - "protein_translation": "MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHRIKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGMETDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEQSGIRPEFVVSTEPTDCQVYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPILGELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEGLFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMYAAIPLSWLATE", - "protein_translation_length": 403, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2841" - ], - [ - "gene_synonym", - "EcoGene:EG13056" - ], - [ - "gene_synonym", - "GI:90111504" - ], - [ - "gene_synonym", - "b2873" - ], - [ - "gene_synonym", - "hyuA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46806" - ], - [ - "gene_synonym", - "ASAP:ABE-0009436" - ], - [ - "gene_synonym", - "GeneID:947359" - ], - [ - "gene_synonym", - "ECK2869" - ], - [ - "gene_synonym", - "NP_417349.4" - ], - [ - "gene_synonym", - "ygeZ" - ] - ], - "dna_sequence": "ATGCGCGTATTGATCAAAAACGGCACTGTCGTTAACGCAGATGGACAAGCCAAACAGGATTTGCTGATTGAAAGCGGGATTGTTCGCCAGTTGGGCAACAATATTTCGCCGCAGCTCCCGTATGAAGAAATTGATGCCACTGGCTGTTACGTTTTCCCTGGCGGCGTGGATGTCCATACGCATTTCAATATTGATGTCGGCATCGCGCGCAGTTGTGATGATTTTTTTACCGGTACCCGCGCAGCTGCGTGTGGCGGTACAACAACCATTATTGACCATATGGGATTTGGCCCAAACGGCTGTCGGTTACGCCATCAACTGGAGGTTTATCGTGGTTATGCCGCCCATAAAGCGGTCATCGATTACAGCTTTCACGGTGTGATCCAGCACATTAATCACGCAATCCTCGACGAAATCCCGATGATAGTCGAGGAAGGACTGAGCAGTTTTAAACTCTATTTAACCTATCAATACAAACTCAACGATGACGAGGTTTTGCAGGCATTACGCCGCTTGCATGAATCCGGCGCGCTGACCACCGTGCACCCGGAAAATGATGCGGCTATCGCCAGCAAGCGGGCGGAATTTATCGCCGCAGGGTTAACCGCGCCGCGCTATCATGCCTTGAGTCGCCCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGCACAAATTGCCGGTAACGCCCCGCTCTATATCGTGCACCTGTCTAACGGCTTAGGTCTGGATTATCTGCGTCTTGCCCGTGCGAATCACCAGCCAGTCTGGGTTGAAACCTGCCCACAATATCTCCTGTTGGACGAACGCAGTTACGATACAGAAGATGGCATGAAGTTCATTCTTAGCCCACCGCTGCGTAACGTACGCGAGCAGGACAAACTGTGGTGTGGCATCAGCGATGGTGCGATTGACGTGGTGGCAACCGATCACTGCACCTTCTCGATGGCTCAACGCCTGCAAATTTCTAAAGGCGATTTCAGTCGCTGCCCAAATGGCTTACCCGGTGTGGAAAACCGCATGCAGTTACTGTTTTCCAGTGGCGTGATGACGGGACGTATAACACCGGAACGCTTTGTTGAATTAACCAGCGCAATGCCCGCCAGGTTGTTTGGCCTGTGGCCGCAAAAAGGATTATTAGCGCCCGGTTCCGACGGCGACGTGGTGATTATCGACCCACGTCAGAGCCAACAAATTCAGCATCGCCATCTCCACGACAACGCCGACTACTCGCCATGGGAGGGTTTTACCTGTCAGGGCGCGATTGTCAGAACCTTATCCCGTGGTGAAACGATTTTCTGTGACGGCACCTTTACAGGCAAAGCCGGGCGAGGTCGTTTCCTGCGACGCAAACCGTTTGTCCCTCCCGTGCTCTAA", - "dna_sequence_length": 1386, - "functions": [ - "D-stereospecific phenylhydantoinase" - ], - "id": "CDS_2830", - "location": [ - [ - "NC_000913", - 3010028, - "+", - 1386 - ] - ], - "md5": "b14a8810e151e73883c5acdf2bd88f55", - "parent_gene": "", - "protein_md5": "97d356d5e61a54c1572589bb6b347ac5", - "protein_translation": "MRVLIKNGTVVNADGQAKQDLLIESGIVRQLGNNISPQLPYEEIDATGCYVFPGGVDVHTHFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVIDYSFHGVIQHINHAILDEIPMIVEEGLSSFKLYLTYQYKLNDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVVIIDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGTFTGKAGRGRFLRRKPFVPPVL", - "protein_translation_length": 461, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2874" - ], - [ - "gene_synonym", - "EcoGene:EG13057" - ], - [ - "gene_synonym", - "JW2842" - ], - [ - "gene_synonym", - "yqeA" - ], - [ - "gene_synonym", - "NP_417350.1" - ], - [ - "gene_synonym", - "GI:16130776" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46807" - ], - [ - "gene_synonym", - "GeneID:947358" - ], - [ - "gene_synonym", - "ASAP:ABE-0009438" - ], - [ - "gene_synonym", - "ECK2870" - ] - ], - "dna_sequence": "ATGAGTAAGAAAATTGTTCTCGCCCTGGGCGGGAATGCGCTGGGCGATGACCTGGCCGGGCAAATGAAAGCGGTAAAAATTACTTCTCAGGCAATTGTTGATTTAATTGCCCAGGGACATGAAGTTATCGTCACTCATGGTAACGGGCCGCAGGTGGGCATGATTAACCAGGCCTTTGAAGCTGCCGCAAAAACTGAAGCGCACTCGCCAATGCTGCCGATGTCTGTCTGTGTTGCATTAAGCCAGGGTTATATTGGTTACGATCTACAAAACGCTTTAAGAGAAGAACTGCTTTCTCGGGGCATTAATAAACCTGTAGCAACGCTGGTTACTCAGGTCGAAGTCGACGCTAACGATCCGGCATTCCTCAACCCGACCAAGCCGATCGGTTCGTTCTTTACCGAGCAAGAAGCAGAGCAACTGACAAAACAGGGTTACACTCTGAAAGAAGATGCTGGTCGCGGCTATCGCCGTGTTGTTGCCTCGCCAAAACCGGTTGATATCATTGAAAAAGAAACGGTTAAAGCTCTGGTAGATGCAGGTCAGGTGGTGATCACCGTTGGCGGTGGTGGTATCCCTGTTATTCGTGAAGGTAACCATCTGCGTGGTGCCAGCGCGGTTATCGATAAAGACTGGGCCAGCGCCCGTTTAGCAGAAATGATTGATGCCGATATGCTGATCATTCTGACTGCGGTAGAAAAAGTGGCCATTAACTTCGGTAAAGAGAATGAACAGTGGCTCGATCGCCTGTCATTAAGTGATGCTGAACGCTTTATCGAAGAAGGTCATTTTGCGAAAGGTTCTATGCTGCCTAAAGTGGAAGCTGCCGCCTCGTTTGCTCGCTCTCGCGCAGGTCGTGAAGCACTGATTACCGTATTGAGCAAAGCGAAAGAAGGGATTGAAGGCAAAACAGGAACGGTGATTTGTCAGTAA", - "dna_sequence_length": 933, - "functions": [ - "putative amino acid kinase" - ], - "id": "CDS_2831", - "location": [ - [ - "NC_000913", - 3011461, - "+", - 933 - ] - ], - "md5": "f49deed5e2f61338d35cc8dbf7e568ae", - "parent_gene": "", - "protein_md5": "1f71bd628b1094941a35fcc94fe24213", - "protein_translation": "MSKKIVLALGGNALGDDLAGQMKAVKITSQAIVDLIAQGHEVIVTHGNGPQVGMINQAFEAAAKTEAHSPMLPMSVCVALSQGYIGYDLQNALREELLSRGINKPVATLVTQVEVDANDPAFLNPTKPIGSFFTEQEAEQLTKQGYTLKEDAGRGYRRVVASPKPVDIIEKETVKALVDAGQVVITVGGGGIPVIREGNHLRGASAVIDKDWASARLAEMIDADMLIILTAVEKVAINFGKENEQWLDRLSLSDAERFIEEGHFAKGSMLPKVEAAASFARSRAGREALITVLSKAKEGIEGKTGTVICQ", - "protein_translation_length": 310, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46808" - ], - [ - "gene_synonym", - "b2875" - ], - [ - "gene_synonym", - "JW2843" - ], - [ - "gene_synonym", - "yqeB" - ], - [ - "gene_synonym", - "GI:16130777" - ], - [ - "gene_synonym", - "EcoGene:EG13058" - ], - [ - "gene_synonym", - "ASAP:ABE-0009441" - ], - [ - "gene_synonym", - "NP_417351.1" - ], - [ - "gene_synonym", - "GeneID:947357" - ], - [ - "gene_synonym", - "ECK2871" - ] - ], - "dna_sequence": "ATGAATATTTTCACAGAGGCTGCAAAACTCGAAGAGCAAAATTGTCCGTTTGCTATGGCGCAAATTGTTGATAGCCGAGGCTCGACTCCCCGCCATTCTGCACAAATGTTAGTGCGCGCCGATGGTTCTATCGTCGGTACAATTGGTGGCGGAATGGTTGAGCGGAAGGTGATTGAAGAGTCGCTTCAGGCATTGCAGGAACGTAAGCCGCGATTATTCCATGGACGTATGGCTCGTAACGGTGCGGATGCTGTCGGGTCAGATTGTGGAGGTGCAATGTCAGTATTTATCAGCGTCCATGGTATGCGTCCACGTCTGGTGTTGATTGGCGCGGGGCATGTCAACCGGGCGATAGCCCAGAGTGCGGCGCTATTAGGATTTGATATTGCCGTTGCTGATATTTATCGCGAAAGCCTCAATCCTGAACTATTCCCACCATCAACCACGCTTCTCCATGCTGAGTCGTTTGGTGCGGCAGTGGAAGCACTGGATATTCGCCCTGATAATTTTGTCCTGATTGCCACGAATAATCAGGATCGTGAAGCCCTCGACAAACTCATTGAACAGCCCATTGCATGGTTGGGGTTGCTGGCAAGTCGTCGCAAGGTTCAGCTTTTCCTGCGTCAATTGCGTGAGAAAGGCGTGGCTGAAGAACATATTGCCCGTTTACATGCGCCCGTTGGTTACAACATAGGTGCGGAAACGCCGCAGGAGATCGCCATCAGCGTGCTGGCAGAAATATTACAGGTGAAAAATAACGCGCCGGGTGGGCTGATGATGAAACCTTCTCATCCTTCCGGACACCAGCTGGTGGTGATTCGCGGTGCGGGAGATATCGCCAGTGGTGTGGCGCTACGTCTGTATCATGCGGGTTTTAAAGTGATCATGCTGGAAGTGGAAAAACCGACAGTGATTCGTTGTACCGTGGCGTTTGCCCAGGCCGTGTTCGATGGCGAAATGACGGTCGAAGGCGTCACTGCTCGCCTGGCAACCAGCTCTGCGGAAGCGATGAAACTTACCGAACGCGGATTCATTCCTGTGATGGTAGATCCCGCCTGTTCATTGCTTGATGAACTGAAACCGCTTTGCGTGGTGGACGCTATTCTGGCGAAACAGAATTTGGGAACGCGGGCAGATATGGCACCAGTAACAATCGCGCTTGGGCCGGGCTTTACTGCTGGGAAGGATTGTCATGCGGTAATTGAAACAAATCGCGGGCACTGGCTCGGTCAGGTGATTTACTCTGGTTGTGCGCAGGAGAATACCGGTGTTCCTGGCAATATTATGGGGCATACCACCCGACGGGTGATCCGTGCTCCTGCTGCAGGCATTATGCGATCCAACGTGAAATTAGGCGATCTGGTGAAAGAGGGCGATGTGATTGCCTGGATTGGTGAGCATGAAATTAAAGCACCGTTGACGGGGATGGTGCGTGGCTTGTTGAACGACGGCCTGGCAGTGGTTGGTGGTTTTAAAATTGGTGATATCGATCCTCGTGGTGAAACCGCTGATTTCACCAGCGTTTCTGATAAAGCCCGGGCGATTGGCGGCGGCGTACTTGAGGCGTTAATGATGTTGATGCATCAGGGCGTGAAAGCGACAAAAGAAGTGCTGGAAGTGGCTTAA", - "dna_sequence_length": 1626, - "functions": [ - "XdhC-CoxI family protein with NAD(P)-binding Rossman fold" - ], - "id": "CDS_2832", - "location": [ - [ - "NC_000913", - 3014239, - "-", - 1626 - ] - ], - "md5": "652f91ab84baca8107eaf028407b9b06", - "parent_gene": "", - "protein_md5": "aceb0f412410ee45d060420b8f57c386", - "protein_translation": "MNIFTEAAKLEEQNCPFAMAQIVDSRGSTPRHSAQMLVRADGSIVGTIGGGMVERKVIEESLQALQERKPRLFHGRMARNGADAVGSDCGGAMSVFISVHGMRPRLVLIGAGHVNRAIAQSAALLGFDIAVADIYRESLNPELFPPSTTLLHAESFGAAVEALDIRPDNFVLIATNNQDREALDKLIEQPIAWLGLLASRRKVQLFLRQLREKGVAEEHIARLHAPVGYNIGAETPQEIAISVLAEILQVKNNAPGGLMMKPSHPSGHQLVVIRGAGDIASGVALRLYHAGFKVIMLEVEKPTVIRCTVAFAQAVFDGEMTVEGVTARLATSSAEAMKLTERGFIPVMVDPACSLLDELKPLCVVDAILAKQNLGTRADMAPVTIALGPGFTAGKDCHAVIETNRGHWLGQVIYSGCAQENTGVPGNIMGHTTRRVIRAPAAGIMRSNVKLGDLVKEGDVIAWIGEHEIKAPLTGMVRGLLNDGLAVVGGFKIGDIDPRGETADFTSVSDKARAIGGGVLEALMMLMHQGVKATKEVLEVA", - "protein_translation_length": 541, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46809" - ], - [ - "gene_synonym", - "b2876" - ], - [ - "gene_synonym", - "yqeC" - ], - [ - "gene_synonym", - "GI:90111505" - ], - [ - "gene_synonym", - "GeneID:947350" - ], - [ - "gene_synonym", - "EcoGene:EG13059" - ], - [ - "gene_synonym", - "NP_417352.2" - ], - [ - "gene_synonym", - "JW5464" - ], - [ - "gene_synonym", - "ASAP:ABE-0009443" - ], - [ - "gene_synonym", - "ECK2872" - ] - ], - "dna_sequence": "GTGAAAAGTATAGTTGACCCATCGGCATTAGTCATTGATTTAGGTGCGCAGAAACGTCCCACTGTGATTTCTGTTGTTGGTGCTGGGGGGAAAACCAGCTTGCTTTTTTGGCTGGCAGAACTGCTCCAGGCTAGCGGCAGGCGTGTGTTAATCACGACGACGACACATATGTTTATGCCAACGTCTCACTGGCCCGTGGTTTTCTGTCGTGATCCCGCCATGCTTCCTCATGCGTCTCTTACATCCCCCATTTCATTTTGTTTTCACAGCTGGAAAGCGAACCAGGGAAAAGTGCAGGGATTTACGCCAGAAGCGATTGATGCACTGGTGCAACGACCAGAGTGTGACGTAATTCTCATTGAAGCAGATGGCTCGCGTGGAATGCCGTTAAAAGCGCCTGATGAGCACGAACCTTGCATACCCAAAAGCAGTTGCTGCGTGATTGCTGTGATGGGAGGACATACTTTGGGCGCGAAAGTGAGCACAGAAAATGTCCATCGCTGGTCGCAGTTTGCTGATATTACCGGGTTAACACCTGATGCAACCTTGCAACTGAGCGATCTCGTTGCGCTGGTTCGCCACCCTCAGGGGGCGTTTAAAAACGTACCGCAAGGTTGTCGGCGAGTCTGGTTCATTAACCGTTTTTCTCAATGTGAGAATGCGATTGCACAAAGCGAGCTCCTTCAACCGCTGCAACAACACGACGTAGAGGCAATCTGGCTGGGCGATATACAAGAACATCCTGCAATCGCGCGCAGATTTGTGAATTAG", - "dna_sequence_length": 771, - "functions": [ - "putative selenium-dependent hydroxylase accessory protein" - ], - "id": "CDS_2833", - "location": [ - [ - "NC_000913", - 3015057, - "-", - 771 - ] - ], - "md5": "a4ef97ca48c20d8ae8c17b5a051844e2", - "parent_gene": "", - "protein_md5": "f96003c83f41f4a283c4234c780de4ed", - "protein_translation": "MKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKVSTENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN", - "protein_translation_length": 256, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2877" - ], - [ - "gene_synonym", - "JW2845" - ], - [ - "gene_synonym", - "GI:16130779" - ], - [ - "gene_synonym", - "ygfJ" - ], - [ - "gene_synonym", - "NP_417353.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46810" - ], - [ - "gene_synonym", - "EcoGene:EG13060" - ], - [ - "gene_synonym", - "mocA" - ], - [ - "gene_synonym", - "ASAP:ABE-0009447" - ], - [ - "gene_synonym", - "GeneID:947356" - ], - [ - "gene_synonym", - "ECK2873" - ] - ], - "dna_sequence": "ATGTCAGCCATCGACTGTATAATTACCGCTGCCGGATTATCATCAAGAATGGGGCAATGGAAAATGATGTTACCCTGGGAACAGGGAACAATTCTTGATACAAGTATCAAAAATGCGTTGCAGTTTTGTAGCCGAATTATTTTAGTCACCGGCTATCGTGGTAATGAACTGCACGAACGTTATGCGAACCAGAGCAATATCACTATTATTCACAACCCAGATTATGCGCAGGGTTTACTAACATCCGTCAAGGCCGCAGTACCCGCAGTGCAAACAGAACATTGTTTTCTCACCCACGGTGACATGCCAACCCTCACCATCGATATTTTTAGAAAAATCTGGTCGTTACGAAATGATGGCGCAATACTGCCACTCCATAATGGCATCCCCGGCCATCCGATTTTAGTGTCAAAACCATGCCTGATGCAGGCAATCCAACGACCCAATGTCACCAATATGCGTCAGGCACTCCTTATGGGAGATCATTATTCCGTCGAAATAGAAAATGCAGAAATAATTTTAGATATTGATACTCCGGACGACTTTATTACAGCGAAGGAAAGGTATACTGAAATTTAG", - "dna_sequence_length": 579, - "functions": [ - "CTP:molybdopterin cytidylyltransferase" - ], - "id": "CDS_2834", - "location": [ - [ - "NC_000913", - 3015160, - "+", - 579 - ] - ], - "md5": "266191954efafcb04e8cc4e34f273649", - "parent_gene": "", - "protein_md5": "03a198eccece8086ffbc95c5fb0452a3", - "protein_translation": "MSAIDCIITAAGLSSRMGQWKMMLPWEQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGDHYSVEIENAEIILDIDTPDDFITAKERYTEI", - "protein_translation_length": 192, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417354.1" - ], - [ - "gene_synonym", - "GI:16130780" - ], - [ - "gene_synonym", - "ygfK" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46811" - ], - [ - "gene_synonym", - "b2878" - ], - [ - "gene_synonym", - "EcoGene:EG13061" - ], - [ - "gene_synonym", - "JW5923" - ], - [ - "gene_synonym", - "GeneID:949068" - ], - [ - "gene_synonym", - "ECK2874" - ], - [ - "gene_synonym", - "ASAP:ABE-0009450" - ] - ], - "dna_sequence": "ATGGGGGATATTATGCGTCCCATTCCGTTTGAGGAACTTTTGACGCGCATATTTGATGAATACCAACAACAACGCTCAATCTTTGGTATTCCCGAGCAACAGTTTTACTCACCTGTAAAAGGTAAAACTGTTAGCGTCTTCGGTGAAACCTGTGCCACTCCCGTCGGCCCTGCCGCTGGCCCGCACACGCAGCTCGCGCAAAATATTGTCACTTCCTGGCTGACTGGCGGACGCTTCATCGAACTAAAAACCGTCCAAATTCTTGACCGCCTGGAGCTGGAAAAGCCCTGTATCGATGCCGAAGACGAGTGCTTTAACACCGAATGGTCTACCGAGTTTACCCTGCTTAAAGCCTGGGATGAATACCTCAAAGCCTGGTTTGCCCTGCACCTTCTCGAAGCGATGTTCCAGCCTTCTGATTCCGGTAAATCGTTCATCTTTAATATGAGCGTCGGTTACAACCTCGAAGGTATTAAGCAACCGCCGATGCAACAGTTCATCGACAATATGATGGACGCATCTGACCATCCGAAATTCGCTCAATATCGCGATACGCTGAATAAATTACTCCAGGATGACGCATTTTTAGCTCGCCACGGATTGCAGGAAAAACGCGAAAGCTTGCAAGCCTTACCCGCTCGCATCCCCACCAGTATGGTGCATGGCGTCACCCTCTCCACCATGCACGGCTGTCCTCCGCATGAAATCGAAGCCATTTGCCGCTACATGCTGGAAGAAAAAGGGCTCAACACCTTTGTGAAACTTAACCCGACCTTACTGGGGTACGCGCGTGTTCGTGAGATCCTCGATGTCTGCGGTTTCGGTTACATAGGCTTAAAAGAAGAGTCATTTGATCACGACCTCAAGCTGACGCAAGCACTGGAAATGCTGGAACGCCTGATGGCACTGGCAAAAGAAAAATCACTCGGCTTTGGCGTAAAACTGACTAACACTCTCGGCACCATCAACAATAAAGGCGCACTGCCTGGTGAAGAGATGTATATGTCAGGCCGTGCGCTGTTCCCGCTCTCCATCAATGTTGCAGCAGTTCTCTCTCGCGCCTTTGACGGCAAACTGCCCATTTCTTATTCCGGTGGTGCCAGTCAGCTGACTATCCGCGATATTTTTGATACAGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGACTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTGACCGACTGCTACGTTGCCCCCTGTGTTACTGCCTGCGCTATCAAGCAAGATATTCCGGAATACATCCGTCTGCTTGGCGAACACCGCTATGCCGACGCGCTGGAACTCATCTACCAACGCAACGCTCTGCCCGCCATTACCGGTCATATTTGCGATCACCAGTGCCAATACAACTGTACCCGCCTGGATTACGACAGTGCGCTGAATATCCGCGAACTGAAAAAAGTCGCGCTGGAAAAAGGTTGGGATGAATATAAGCAACGCTGGCACAAACCAGCCGGTTCTGGTTCACGCCATCCGGTTGCCGTGATTGGTGCAGGTCCGGCGGGTCTGGCAGCAGGTTACTTCCTTGCCAGAGCGGGCCATCCGGTTACGCTGTTTGAACGCGAAGCCAATGCGGGCGGCGTGGTGAAAAATATCATTCCTCAGTTCCGTATTCCTGCAGAGTTAATTCAGCACGATATCGATTTTGTTGCCGCTCACGGCGTGAAATTTGAGTATGGCTGCTCACCCGATTTAACCATTGAGCAGTTAAAAAATCAGGGCTTCCACTATGTTCTGATTGCCACCGGCACTGATAAAAATAGCGGTGTGAAACTGGCGGGCGACAACCAAAATGTCTGGAAATCACTCCCCTTCCTGCGTGAATACAACAAGGGTACAGCGCTCAAGCTGGGCAAACATGTGGTCGTTGTCGGGGCGGGTAACACCGCAATGGACTGCGCTCGTGCGGCGTTACGCGTTCCAGGCGTAGAAAAAGCAACGATCGTTTACCGTCGTTCACTACAAGAGATGCCCGCATGGCGCGAAGAGTATGAAGAAGCGTTGCACGACGGCGTAGAGTTCCGTTTCCTGAATAATCCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGGTCGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGAACAGCAGGATACTGAAGCCCTGAATGCGATGGGCGTGCCGCTGGACAAAAACGGCTGGCCAGACGTCGACCATAATGGCGAAACTCGTCTGACTGACGTCTTTATGATCGGCGACGTACAGCGCGGACCATCCTCCATTGTCGCTGCTGTCGGAACCGCGCGTCGGGCGACCGATGCCATCCTTAGTCGGGAAAATATCCGTTCCCACCAGAACGATAAATACTGGAACAACGTCAATCCAGCGGAAATCTATCAACGTAAAGGCGATATCTCTATCACGCTGGTGAACAGTGACGATCGTGACGCGTTTGTCGCCCAGGAAGCCGCTCGCTGCCTCGAATGTAACTACGTTTGCAGCAAGTGTGTGGATGTCTGCCCGAACCGCGCCAACGTCTCCATTGCGGTCCCAGGCTTCCAGAACCGTTTCCAGACGCTGCACCTCGACGCTTACTGTAACGAATGCGGCAACTGCGCTCAGTTCTGTCCGTGGAACGGTAAACCGTACAAAGACAAAATCACCGTCTTCAGCCTGGCGCAAGACTTTGATAACAGCAGCAACCCAGGCTTCCTTGTGGAAGATTGCCGGGTACGAGTACGTCTGAATAACCAAAGCTGGGTGTTAAACATCGACAGCAAAGGTCAGTTTAACAACGTACCACCGGAGCTGAACGATATGTGCCGCATCATCAGCCATGTCCACCAGCATCATCATTATCTGCTGGGCCGCGTGGAGGTGTAA", - "dna_sequence_length": 3099, - "functions": [ - "putative Fe-S subunit oxidoreductase subunit" - ], - "id": "CDS_2835", - "location": [ - [ - "NC_000913", - 3016060, - "+", - 3099 - ] - ], - "md5": "7772e5da817dfe606d03a9ee6d98c064", - "parent_gene": "", - "protein_md5": "affccc9169b0550a7326170650a89211", - "protein_translation": "MGDIMRPIPFEELLTRIFDEYQQQRSIFGIPEQQFYSPVKGKTVSVFGETCATPVGPAAGPHTQLAQNIVTSWLTGGRFIELKTVQILDRLELEKPCIDAEDECFNTEWSTEFTLLKAWDEYLKAWFALHLLEAMFQPSDSGKSFIFNMSVGYNLEGIKQPPMQQFIDNMMDASDHPKFAQYRDTLNKLLQDDAFLARHGLQEKRESLQALPARIPTSMVHGVTLSTMHGCPPHEIEAICRYMLEEKGLNTFVKLNPTLLGYARVREILDVCGFGYIGLKEESFDHDLKLTQALEMLERLMALAKEKSLGFGVKLTNTLGTINNKGALPGEEMYMSGRALFPLSINVAAVLSRAFDGKLPISYSGGASQLTIRDIFDTGIRPITMATDLLKPGGYLRLSACMRELEGSDAWGLDHVDVERLNRLAADALTMEYTQKHWKPEERIEVAEDLPLTDCYVAPCVTACAIKQDIPEYIRLLGEHRYADALELIYQRNALPAITGHICDHQCQYNCTRLDYDSALNIRELKKVALEKGWDEYKQRWHKPAGSGSRHPVAVIGAGPAGLAAGYFLARAGHPVTLFEREANAGGVVKNIIPQFRIPAELIQHDIDFVAAHGVKFEYGCSPDLTIEQLKNQGFHYVLIATGTDKNSGVKLAGDNQNVWKSLPFLREYNKGTALKLGKHVVVVGAGNTAMDCARAALRVPGVEKATIVYRRSLQEMPAWREEYEEALHDGVEFRFLNNPERFDADGTLTLRVMSLGEPDEKGRRRPVETNETVTLLVDSLITAIGEQQDTEALNAMGVPLDKNGWPDVDHNGETRLTDVFMIGDVQRGPSSIVAAVGTARRATDAILSRENIRSHQNDKYWNNVNPAEIYQRKGDISITLVNSDDRDAFVAQEAARCLECNYVCSKCVDVCPNRANVSIAVPGFQNRFQTLHLDAYCNECGNCAQFCPWNGKPYKDKITVFSLAQDFDNSSNPGFLVEDCRVRVRLNNQSWVLNIDSKGQFNNVPPELNDMCRIISHVHQHHHYLLGRVEV", - "protein_translation_length": 1032, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417355.4" - ], - [ - "gene_synonym", - "GI:90111506" - ], - [ - "gene_synonym", - "JW2847" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46812" - ], - [ - "gene_synonym", - "b2879" - ], - [ - "gene_synonym", - "ygfL" - ], - [ - "gene_synonym", - "EcoGene:EG13062" - ], - [ - "gene_synonym", - "GeneID:949072" - ], - [ - "gene_synonym", - "ssnA" - ], - [ - "gene_synonym", - "ECK2875" - ], - [ - "gene_synonym", - "ASAP:ABE-0009452" - ] - ], - "dna_sequence": "ATGTTGATTCTGAAGAATGTCACTGCGGTACAGCTACACCCGGCAAAAGTGCAGGAAGGCGTTGATATCGCCATCGAAAACGATGTGATTGTCGCTATCGGCGATGCCCTGACGCAACGCTACCCCGACGCCAGCTTCAAAGAGATGCATGGCCGGATTGTGATGCCAGGGATTGTCTGCTCGCACAACCATTTTTACTCGGGGCTTTCCCGCGGAATTATGGCAAACATCGCCCCTTGCCCGGATTTCATCTCAACGCTGAAAAATCTCTGGTGGCGGCTCGATCGCGCCCTTGATGAAGAGTCGCTCTATTACAGCGGACTGATTTGTTCCCTGGAAGCGATTAAGAGCGGATGTACATCGGTTATCGATCACCATGCCTCTCCGGCGTATATCGGCGGGTCGCTCTCCACATTGCGCGACGCATTTTTAAAAGTTGGCCTGCGCGCGATGACCTGTTTTGAAACTACTGACCGTAACAACGGCATCAAAGAGTTGCAGGAAGGTGTAGAAGAAAACATCCGTTTCGCCCGTTTGATTGATGAGGCGAAGAAAGCGACAAGCGAGCCGTATCTGGTGGAAGCACATATCGGTGCTCACGCGCCGTTTACCGTGCCGGATGCCGGTCTGGAGATGCTGCGTGAAGCCGTGAAAGCCACAGGCCGTGGTTTGCATATTCACGCTGCGGAAGACCTTTACGACGTTTCCTACAGTCACCACTGGTACGGCAAAGACCTGCTGGCACGACTGGCGCAATTCGATCTCATCGACAGCAAAACGCTGGTCGCTCATGGGCTGTACTTGTCGAAAGATGACATCACCCTACTCAATCAGCGCGATGCGTTCCTGGTGCATAACGCCCGTTCAAACATGAACAACCATGTCGGCTACAACCATCACCTTAGCGACATCCGCAATCTGGCGTTGGGAACGGACGGCATTGGTTCGGACATGTTTGAAGAGATGAAATTTGCCTTCTTTAAACATCGCGATGCGGGTGGTCCGCTGTGGCCTGACAGTTTTGCCAAAGCCCTGACTAACGGTAACGAACTGATGAGCCGCAACTTTGGCGCGAAATTTGGGCTTCTGGAAGCCGGTTACAAAGCTGATTTAACCATTTGCGATTACAACTCGCCGACGCCGCTGCTGGCAGACAATATCGCCGGGCATATCGCTTTCGGTATGGGCTCAGGCAGCGTTCACAGCGTGATGGTCAATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAA", - "dna_sequence_length": 1329, - "functions": [ - "putative chlorohydrolase/aminohydrolase" - ], - "id": "CDS_2836", - "location": [ - [ - "NC_000913", - 3019161, - "+", - 1329 - ] - ], - "md5": "98345eae57a0c52ff1fc1d6157dea8e5", - "parent_gene": "", - "protein_md5": "26acda6262c33e006fdca9452f6991a5", - "protein_translation": "MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA", - "protein_translation_length": 442, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130782" - ], - [ - "gene_synonym", - "b2880" - ], - [ - "gene_synonym", - "EcoGene:EG13063" - ], - [ - "gene_synonym", - "ygfM" - ], - [ - "gene_synonym", - "GeneID:949071" - ], - [ - "gene_synonym", - "NP_417356.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64557" - ], - [ - "gene_synonym", - "JW2848" - ], - [ - "gene_synonym", - "ECK2876" - ], - [ - "gene_synonym", - "ASAP:ABE-0009456" - ] - ], - "dna_sequence": "ATGATTGAACAATTTTTCAGGCCCGACTCTGTCGAACAGGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAATGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTACAGGATCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTTATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAATCGCCGCCCGCCAGGAAGAGTCGGTGCTGCTTCCCGTCCTGTTGGCACTGGATGCTGAACTGGTTTTTGGCAACGGCGAAACGCTGTCAATCGAGGACTACCTGGCCTGCCCATGCGATCGCCTGCTAACCGAAATTATCATTAAAGATCCGTATCGCACCTGTGCGACCCGCAAAATTAGCCGTTCTCAGGCAGGTTTAACCGTCGTGACGGCAGCCGTTGCAATGACAGACCACGACGGTATGCGAATTGCGCTGGATGGCGTCGCCAGTAAAGCACTGCGTCTGCATGATGTCGAAAAACAAAATCTGGAAGGCAATGCACTTGAACAGGCTGTCGCCAACGCCATTTTCCCGCAGGAAGATTTGCGGGGCAGCGTGGCCTATAAACGCTATATCACGGGAGTTCTGGTAGCCGACCTGTATGCCGACTGCCAACAGGCTGGGGAGGAAGCCGTATGA", - "dna_sequence_length": 780, - "functions": [ - "putative oxidoreductase" - ], - "id": "CDS_2837", - "location": [ - [ - "NC_000913", - 3020540, - "+", - 780 - ] - ], - "md5": "756afcd10d0393c4de487bf5ae980ab4", - "parent_gene": "", - "protein_md5": "be97866f61c7dc08f7edcd699c4015ca", - "protein_translation": "MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWVDWDNGALRIGAMSRLQPLRDARFIPAALREALGFVYSRHVRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRTCATRKISRSQAGLTVVTAAVAMTDHDGMRIALDGVASKALRLHDVEKQNLEGNALEQAVANAIFPQEDLRGSVAYKRYITGVLVADLYADCQQAGEEAV", - "protein_translation_length": 259, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130783" - ], - [ - "gene_synonym", - "xdhD" - ], - [ - "gene_synonym", - "b2881" - ], - [ - "gene_synonym", - "EcoGene:EG13064" - ], - [ - "gene_synonym", - "ygfN" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46814" - ], - [ - "gene_synonym", - "JW2849" - ], - [ - "gene_synonym", - "ASAP:ABE-0009459" - ], - [ - "gene_synonym", - "NP_417357.1" - ], - [ - "gene_synonym", - "ECK2877" - ], - [ - "gene_synonym", - "GeneID:949079" - ] - ], - "dna_sequence": "ATGATCATCCACTTTACTTTAAATGGCGCGCCTCAGGAGCTAACCGTTAATCCAGGCGAAAACGTGCAAAAGCTGTTGTTTAACATGGGAATGCACTCTGTACGCAACAGTGATGATGGTTTCGGGTTTGCCGGTTCTGACGCAATAATCTTTAACGGTAATATCGTTAACGCGTCCTTGCTTATTGCCGCACAGTTAGAGAAGGCAGATATTCGTACCGCAGAATCTCTGGGCAAATGGAACGAGTTAAGTCTGGTTCAACAGGCAATGGTTGATGTTGGCGTGGTGCAGTCTGGTTATAACGATCCAGCTGCAGCTCTGATTATCACCGATCTTCTCGATCGCATCGCCGCACCTACCCGCGAAGAGATCGACGACGCGCTTTCTGGTTTGTTCAGCCGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCGACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGAAGACCGCGTAACGGCTGACGCCTGCGTCATTAAAATGTTACGTAGCCCACACGCTCACGCACTGATTACTCATCTGGATGTCAGCAAAGCTGAAGCCTTACCGGGCGTCGTTCACGTTATTACTCACCTGAATTGCCCGGATATCTACTATACCCCGGGTGGTCAGAGCGCACCGGAACCGTCACCGCTTGACCGCCGTATGTTCGGCAAGAAAATGCGTCACGTCGGCGATCGTGTTGCTGCGGTCGTCGCAGAAAGTGAAGAAATTGCGCTCGAAGCACTGAAGCTCATCGACGTTGAATATGAAGTGCTTAAGCCGGTAATGTCGATCGACGAAGCAATGGCGGAAGATGCGCCTGTCGTGCACGATGAACCGGTGGTGTATGTTGCTGGTGCGCCAGATACTCTGGAAGACGATAACAGCCATGCAGCCCAGCGCGGCGAGCATATGATCATCAACTTCCCGATCGGTTCTCGCCCTCGCAAAAATATCGCCGCCAGTATTCATGGTCATATTGGCGATATGGACAAAGGCTTTGCCGATGCCGATGTGATCATTGAGCGAACCTATAACTCAACGCAAGCGCAGCAGTGCCCGACTGAAACACATATCTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGATTTCCGCGCCAACACTGGCCCTTACGGCAACCACTCACTCACCGTACCGTGTAACGGACCGGCGCTGTCGCTGCCGTTATATCCGTGCGATAACGTCGATTTCCAGGTCACCACCTACTACAGCAACATTTGCCCAAATGGTGCTTATCAGGGTTATGGCGCACCGAAAGGTAACTTCGCTATCACCATGGCATTAGCGGAACTGGCTGAACAGTTACAGATCGACCAACTGGAAATTATCGAACGTAACCGGGTACACGAAGGGCAAGAGCTGAAAATTCTCGGTGCAATCGGTGAAGGTAAAGCGCCGACCTCCGTTCCTTCCGCCGCCAGCTGTGCACTGGAAGAGATCCTGCGTCAGGGTCGCGAGATGATCCAATGGTCGTCACCGAAACCGCAAAATGGTGACTGGCACATCGGTCGCGGCGTCGCCATTATCATGCAGAAATCGGGTATCCCGGATATCGATCAGGCTAACTGCATGATCAAACTGGAATCGGACGGCACCTTTATCGTTCATTCTGGCGGTGCGGATATTGGTACTGGTCTGGATACTGTAGTGACGAAACTGGCAGCAGAAGTGCTGCACTGCCCACCGCAGGACGTGCATGTTATCTCCGGTGATACCGATCATGCGTTGTTTGATAAAGGCGCATATGCCTCGTCCGGTACTTGCTTCTCGGGTAACGCGGCGCGTTTGGCAGCGGAAAATCTACGGGAGAAAATTCTGTTCCACGGCGCGCAAATGTTGGGTGAGCCAGTGGCAGATGTTCAACTGGCAACGCCGGGCGTCGTGCGCGGCAAGAAAGGCGAAGTTAGTTTCGGGGATATTGCCCATAAAGGCGAAACCGGCACCGGCTTTGGTTCACTGGTGGGAACTGGCAGTTATATCACGCCTGATTTCGCCTTCCCGTATGGCGCAAACTTCGCTGAAGTTGCCGTCAACACGCGTACGGGTGAAATCCGCCTGGATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATGACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGATCTCGGAAATCGGTGTAAATGGCGCAGCTCCGGCGATTGCTACCGCAATTCACGATGCATGCGGCATCTGGTTACGCGAATGGCATTTCACACCGGAGAAAATACTCACTGCGCTGGAAAAAATATAA", - "dna_sequence_length": 2871, - "functions": [ - "putative hypoxanthine oxidase, molybdopterin-binding/Fe-S binding" - ], - "id": "CDS_2838", - "location": [ - [ - "NC_000913", - 3021316, - "+", - 2871 - ] - ], - "md5": "1580c7c538c835650e1164cab4d0ef34", - "parent_gene": "", - "protein_md5": "e4f20fbf39c5091b4f3096141689d0d9", - "protein_translation": "MIIHFTLNGAPQELTVNPGENVQKLLFNMGMHSVRNSDDGFGFAGSDAIIFNGNIVNASLLIAAQLEKADIRTAESLGKWNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAAPTREEIDDALSGLFSRDAGWQQYYQVIELAVARKNNPQATIDIAPTFRDDLEVIGKHYPKTDAAKMVQAKPCYVEDRVTADACVIKMLRSPHAHALITHLDVSKAEALPGVVHVITHLNCPDIYYTPGGQSAPEPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEYEVLKPVMSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGFADADVIIERTYNSTQAQQCPTETHICFTRMDGDRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQDILLEEVCAWATCVTGRPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLYPCDNVDFQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGKAPTSVPSAASCALEEILRQGREMIQWSSPKPQNGDWHIGRGVAIIMQKSGIPDIDQANCMIKLESDGTFIVHSGGADIGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEPVADVQLATPGVVRGKKGEVSFGDIAHKGETGTGFGSLVGTGSYITPDFAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGATLRAIGHSMSEEIIYDAEGHPLTRDLRSYGAPKIGDIPRDFRAVLVPSDDKVGPFGAKSISEIGVNGAAPAIATAIHDACGIWLREWHFTPEKILTALEKI", - "protein_translation_length": 956, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2850" - ], - [ - "gene_synonym", - "GI:90111507" - ], - [ - "gene_synonym", - "ASAP:ABE-0009463" - ], - [ - "gene_synonym", - "GeneID:949075" - ], - [ - "gene_synonym", - "xanQ" - ], - [ - "gene_synonym", - "b2882" - ], - [ - "gene_synonym", - "ygfO" - ], - [ - "gene_synonym", - "ECK2878" - ], - [ - "gene_synonym", - "EcoGene:EG13065" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67444" - ], - [ - "gene_synonym", - "NP_417358.2" - ] - ], - "dna_sequence": "ATGTCTGATATAAACCATGCAGGTTCTGACCTTATATTTGAACTGGAGGATCGCCCTCCCTTTCATCAGGCTCTCGTTGGTGCCATTACCCATCTGTTGGCAATTTTCGTTCCGATGGTAACCCCCGCGTTAATCGTGGGTGCGGCCTTACAGCTTTCCGCTGAAACAACTGCCTATCTTGTTTCTATGGCGATGATCGCCTCTGGTATTGGTACCTGGTTACAAGTAAACCGCTACGGCATCGTCGGTTCTGGCCTACTCTCAATTCAGTCAGTCAATTTTTCATTTGTTACGGTCATGATTGCGCTGGGCAGCAGCATGAAAAGCGACGGTTTTCACGAAGAGTTAATCATGTCGTCGCTTCTCGGCGTCTCCTTCGTTGGCGCATTTCTGGTTGTCGGATCTTCATTTATCTTGCCCTATTTACGTCGGGTTATTACGCCTACCGTCAGCGGTATTGTGGTACTGATGATCGGCTTAAGCCTGATTAAAGTCGGCATTATCGATTTTGGTGGAGGATTTGCAGCCAAAAGCAGCGGTACGTTCGGCAATTACGAACATCTCGGCGTTGGTTTATTGGTTTTAATTGTGGTGATCGGCTTTAACTGCTGTCGCAGTCCGTTGCTACGCATGGGAGGGATCGCCATTGGGCTATGTGTCGGCTATATCGCATCGTTATGCCTGGGCATGGTGGATTTCAGCAGTATGCGCAATTTGCCGTTAATCACCATCCCGCATCCGTTCAAATACGGCTTTAGTTTTAGCTTCCATCAGTTCCTGGTGGTTGGCACGATTTATCTGCTTAGCGTGCTGGAAGCAGTCGGCGATATCACCGCCACGGCAATGGTTTCCCGCCGCCCCATTCAGGGGGAAGAGTATCAGTCCCGGCTGAAAGGCGGCGTGCTGGCAGATGGTCTGGTTTCTGTTATCGCCTCCGCTGTCGGTTCATTACCATTAACCACGTTTGCGCAAAATAATGGGGTTATTCAGATGACTGGCGTCGCTTCACGTTATGTCGGGCGAACCATCGCGGTAATGCTGGTTATCCTCGGCTTATTTCCGATGATTGGCGGCTTCTTCACGACCATTCCCTCGGCAGTTCTGGGAGGCGCAATGACGTTGATGTTTTCCATGATTGCCATCGCAGGGATTCGCATCATCATCACCAACGGTTTAAAGCGCCGTGAAACACTTATTGTCGCCACTTCTTTAGGTTTAGGGCTTGGCGTCTCCTACGATCCCGAAATTTTTAAAATATTGCCAGCCTCTATTTATGTATTAGTTGAAAACCCTATTTGTGCTGGCGGGTTAACTGCGATTTTATTAAATATTATCCTCCCTGGTGGCTACCGACAGGAAAACGTTCTGCCTGGTATTACCTCAGCGGAAGAGATGGATTAA", - "dna_sequence_length": 1401, - "functions": [ - "xanthine permease" - ], - "id": "CDS_2839", - "location": [ - [ - "NC_000913", - 3024351, - "+", - 1401 - ] - ], - "md5": "992f76798c152847bc58f6eaa3df3974", - "parent_gene": "", - "protein_md5": "c6c906e0909d680b1efc94d9b2b6c727", - "protein_translation": "MSDINHAGSDLIFELEDRPPFHQALVGAITHLLAIFVPMVTPALIVGAALQLSAETTAYLVSMAMIASGIGTWLQVNRYGIVGSGLLSIQSVNFSFVTVMIALGSSMKSDGFHEELIMSSLLGVSFVGAFLVVGSSFILPYLRRVITPTVSGIVVLMIGLSLIKVGIIDFGGGFAAKSSGTFGNYEHLGVGLLVLIVVIGFNCCRSPLLRMGGIAIGLCVGYIASLCLGMVDFSSMRNLPLITIPHPFKYGFSFSFHQFLVVGTIYLLSVLEAVGDITATAMVSRRPIQGEEYQSRLKGGVLADGLVSVIASAVGSLPLTTFAQNNGVIQMTGVASRYVGRTIAVMLVILGLFPMIGGFFTTIPSAVLGGAMTLMFSMIAIAGIRIIITNGLKRRETLIVATSLGLGLGVSYDPEIFKILPASIYVLVENPICAGGLTAILLNIILPGGYRQENVLPGITSAEEMD", - "protein_translation_length": 466, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009465" - ], - [ - "gene_synonym", - "guaD" - ], - [ - "gene_synonym", - "GI:16130785" - ], - [ - "gene_synonym", - "EcoGene:EG13066" - ], - [ - "gene_synonym", - "b2883" - ], - [ - "gene_synonym", - "GeneID:947366" - ], - [ - "gene_synonym", - "NP_417359.1" - ], - [ - "gene_synonym", - "ygfP" - ], - [ - "gene_synonym", - "JW5466" - ], - [ - "gene_synonym", - "ECK2879" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76641" - ] - ], - "dna_sequence": "ATGATGTCAGGAGAACACACGTTAAAAGCGGTACGAGGCAGTTTTATTGATGTCACCCGTACGATCGATAACCCGGAAGAGATTGCCTCTGCGCTGCGGTTTATTGAGGATGGTTTATTACTCATTAAACAGGGAAAAGTGGAATGGTTTGGCGAATGGGAAAACGGAAAGCATCAAATTCCTGACACCATTCGCGTGCGCGACTATCGCGGCAAACTGATAGTACCGGGCTTTGTCGATACACATATCCATTATCCGCAAAGTGAAATGGTGGGGGCCTATGGTGAGCAATTGCTGGAGTGGTTGAATAAACACACCTTCCCTACTGAACGTCGTTATGAGGATTTAGAGTACGCCCGCGAAATGTCGGCGTTCTTCATCAAGCAGCTTTTACGTAACGGAACCACCACGGCGCTGGTGTTTGGCACTGTTCATCCGCAATCTGTTGATGCGCTGTTTGAAGCCGCCAGTCATATCAATATGCGTATGATTGCCGGTAAGGTGATGATGGACCGCAACGCACCGGATTATCTGCTCGACACTGCCGAAAGCAGCTATCACCAAAGCAAAGAACTGATCGAACGCTGGCACAAAAATGGTCGTCTGCTATATGCGATTACGCCACGCTTCGCCCCGACCTCATCTCCTGAACAGATGGCGATGGCGCAACGCCTGAAAGAAGAATATCCGGATACGTGGGTACATACCCATCTCTGTGAAAACAAAGATGAAATTGCCTGGGTGAAATCGCTTTATCCTGACCATGATGGTTATCTGGATGTTTACCATCAGTACGGCCTGACCGGTAAAAACTGTGTCTTTGCTCACTGCGTCCATCTCGAAGAAAAAGAGTGGGATCGTCTCAGCGAAACCAAATCCAGCATTGCTTTCTGTCCGACCTCCAACCTTTACCTCGGCAGCGGCTTATTCAACTTGAAAAAAGCATGGCAGAAGAAAGTTAAAGTGGGCATGGGAACGGATATCGGTGCCGGAACCACTTTCAACATGCTGCAAACGCTGAACGAAGCCTACAAAGTATTGCAATTACAAGGCTATCGCCTCTCGGCATATGAAGCGTTTTACCTGGCCACGCTCGGCGGAGCGAAATCTCTGGGCCTTGACGATTTGATTGGCAACTTTTTACCTGGCAAAGAGGCTGATTTCGTGGTGATGGAACCCACCGCCACTCCGCTACAGCAGCTGCGCTATGACAACTCTGTTTCTTTAGTCGACAAATTGTTCGTGATGATGACGTTGGGCGATGACCGTTCGATCTACCGCACCTACGTTGATGGTCGTCTGGTGTACGAACGCAACTAA", - "dna_sequence_length": 1320, - "functions": [ - "guanine deaminase" - ], - "id": "CDS_2840", - "location": [ - [ - "NC_000913", - 3025766, - "+", - 1320 - ] - ], - "md5": "902b45964adc9bbceebe5956efb1d5f7", - "parent_gene": "", - "protein_md5": "97da95165eb12ee19318cf46176dd87d", - "protein_translation": "MMSGEHTLKAVRGSFIDVTRTIDNPEEIASALRFIEDGLLLIKQGKVEWFGEWENGKHQIPDTIRVRDYRGKLIVPGFVDTHIHYPQSEMVGAYGEQLLEWLNKHTFPTERRYEDLEYAREMSAFFIKQLLRNGTTTALVFGTVHPQSVDALFEAASHINMRMIAGKVMMDRNAPDYLLDTAESSYHQSKELIERWHKNGRLLYAITPRFAPTSSPEQMAMAQRLKEEYPDTWVHTHLCENKDEIAWVKSLYPDHDGYLDVYHQYGLTGKNCVFAHCVHLEEKEWDRLSETKSSIAFCPTSNLYLGSGLFNLKKAWQKKVKVGMGTDIGAGTTFNMLQTLNEAYKVLQLQGYRLSAYEAFYLATLGGAKSLGLDDLIGNFLPGKEADFVVMEPTATPLQQLRYDNSVSLVDKLFVMMTLGDDRSIYRTYVDGRLVYERN", - "protein_translation_length": 439, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4464" - ], - [ - "gene_synonym", - "ASAP:ABE-0174113" - ], - [ - "gene_synonym", - "EcoGene:EG13067" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46817" - ], - [ - "gene_synonym", - "ygfR" - ], - [ - "gene_synonym", - "GI:49176279" - ], - [ - "gene_synonym", - "ECK2880" - ], - [ - "gene_synonym", - "ygfQ" - ], - [ - "gene_synonym", - "JW5467" - ], - [ - "gene_synonym", - "GeneID:2847748" - ], - [ - "gene_synonym", - "ghxQ" - ], - [ - "gene_synonym", - "YP_026186.1" - ] - ], - "dna_sequence": "ATGTCTGGAGACATCCTACAAACACCGGACGCACCAAAGCCACAGGGCGCGCTGGATAATTATTTTAAAATTACCGCTCGTGGCAGTACCGTTCGTCAGGAAGTACTGGCTGGCTTAACGACCTTTCTGGCCATGGTTTATTCCGTTATCGTCGTTCCGGGAATGCTGGGCAAAGCAGGTTTTCCTCCCGCAGCTGTGTTTGTTGCCACCTGTCTGGTCGCGGGCTTCGGCTCGTTGCTGATGGGATTATGGGCTAATTTGCCAATGGCGATTGGTTGCGCGATTTCCTTGACGGCGTTTACCGCATTCAGTCTGGTACTCGGGCAACAAATTAGCGTTCCTGTCGCACTGGGCGCGGTATTTCTGATGGGCGTCATCTTCACCGCCATTTCCGTAACCGGTGTGCGTACCTGGATCTTACGTAATTTGCCGATGGGTATCGCTCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAGTGTCGCGTACCCGGCGGGATCTTGTTGGTGATTATTGCAATTTCGATCATCGGCTTAATCTTTGACCCAGCGGTGAAATACCACGGTCTGGTGGCGATGCCAAGCCTGACTGGCGAAGATGGTAAGTCTCTGATTTTCAGCCTCGATATTATGGGTGCACTCCAGCCAACTGTACTTCCGAGTGTACTGGCATTGGTGATGACCGCAGTGTTCGACGCTACTGGCACCATCCGTGCCGTCGCCGGTCAGGCGAATTTGTTGGATAAAGACAACCAGATCATCAACGGCGGCAAAGCCCTGACCAGTGACTCAGTAAGTTCAATATTCTCCGGCCTGGTGGGCGCAGCGCCCGCAGCGGTTTATATCGAATCAGCGGCAGGAACCGCCGCCGGGGGTAAAACAGGTTTAACCGCAACCGTAGTGGGGGCGTTATTCCTGTTAATTCTGTTTTTATCACCGCTGTCATTTTTGATCCCTGGTTACGCCACTGCACCCGCTCTGATGTACGTAGGTTTGCTGATGTTAAGTAACGTCTCGAAGCTGGATTTCAATGATTTTATTGACGCTATGGCTGGCCTGGTGTGTGCCGTGTTCATCGTTCTGACTTGTAATATCGTTACCGGTATTATGCTGGGCTTTGTGACACTGGTCGTAGGCCGCGTCTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAA", - "dna_sequence_length": 1368, - "functions": [ - "guanine/hypoxanthine permease, high affinity", - "guanine/hypoxanthine:H+ symporter" - ], - "id": "CDS_2841", - "location": [ - [ - "NC_000913", - 3027121, - "+", - 1368 - ] - ], - "md5": "b0df3cd081c8776fae5ec46f2496d975", - "parent_gene": "", - "protein_md5": "91e4634553e74b24c052e927f8591eea", - "protein_translation": "MSGDILQTPDAPKPQGALDNYFKITARGSTVRQEVLAGLTTFLAMVYSVIVVPGMLGKAGFPPAAVFVATCLVAGFGSLLMGLWANLPMAIGCAISLTAFTAFSLVLGQQISVPVALGAVFLMGVIFTAISVTGVRTWILRNLPMGIAHGTGIGIGLFLLLIAANGVGMVIKNPIEGLPVALGAFTSFPVMMSLLGLAVIFGLEKCRVPGGILLVIIAISIIGLIFDPAVKYHGLVAMPSLTGEDGKSLIFSLDIMGALQPTVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDNQIINGGKALTSDSVSSIFSGLVGAAPAAVYIESAAGTAAGGKTGLTATVVGALFLLILFLSPLSFLIPGYATAPALMYVGLLMLSNVSKLDFNDFIDAMAGLVCAVFIVLTCNIVTGIMLGFVTLVVGRVFAREWQKLNIGTVIITAALVAFYAGGWAI", - "protein_translation_length": 455, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46819" - ], - [ - "gene_synonym", - "ASAP:ABE-0009471" - ], - [ - "gene_synonym", - "EcoGene:EG13069" - ], - [ - "gene_synonym", - "NP_417362.4" - ], - [ - "gene_synonym", - "GI:90111508" - ], - [ - "gene_synonym", - "b2886" - ], - [ - "gene_synonym", - "ygfS" - ], - [ - "gene_synonym", - "GeneID:949016" - ], - [ - "gene_synonym", - "ECK2881" - ], - [ - "gene_synonym", - "JW5468" - ] - ], - "dna_sequence": "ATGAAATCGTTAATTATCGTTAATCCGGCTGACTGTATTGGCTGCCGTACTTGTGAAGTAGCCTGTGTGGTCGCTCACCCTTCAGAACAGGAGTTGAATGCCGATGTCTTTTTACCCCGGCTGAAGGTACAGCGACTGGACAGCATCAGTGCGCCGGTGATGTGCCATCAGTGTGAAAACGCCCCTTGTGTTGGCGCTTGCCCCGTGGGGGCGCTGACGATGGGCGAGCAGGTGGTGCAGACCAATTCTGCCCGTTGTATTGGCTGTCAGAGTTGCGTCAGTGCGTGCCCGTTTGGAATGATCACCATTCAGTCGTTGCCGGGGGATACCCGACAACAAATTGTGAAATGCGATCTCTGTGAACAGCGGGAAGAGGGGCCAGCCTGCGTTGAATCTTGCCCAACACAGGCGCTGCAGTTGCTTACTGAAAGAGAACTCAGGCGAGTCCGCCAGCAGCGTATTGTTGCCAGCGGTGAGAATCCTCTCTGA", - "dna_sequence_length": 489, - "functions": [ - "putative 4Fe-4S ferredoxin-type oxidoreductase subunit" - ], - "id": "CDS_2842", - "location": [ - [ - "NC_000913", - 3029012, - "-", - 489 - ] - ], - "md5": "742da4293313983c8027204396bc98c1", - "parent_gene": "", - "protein_md5": "5adc6fcf1733482f402d80c2551253f9", - "protein_translation": "MKSLIIVNPADCIGCRTCEVACVVAHPSEQELNADVFLPRLKVQRLDSISAPVMCHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQIVKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENPL", - "protein_translation_length": 162, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009473" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46820" - ], - [ - "gene_synonym", - "EcoGene:EG13070" - ], - [ - "gene_synonym", - "GI:90111509" - ], - [ - "gene_synonym", - "NP_417363.2" - ], - [ - "gene_synonym", - "b2887" - ], - [ - "gene_synonym", - "ECK2882" - ], - [ - "gene_synonym", - "ygfT" - ], - [ - "gene_synonym", - "JW5469" - ], - [ - "gene_synonym", - "GeneID:949018" - ] - ], - "dna_sequence": "ATGAATAAGTTTATTGCTGCTGAAGCTGCGGAATGTATAGGCTGTCATGCTTGTGAAATTGCCTGTGCGGTGGCACACAATCAAGAAAACTGGCCGCTGAGTCACAGTGACTTTCGACCGCGTATCCACGTTGTAGGGAAAGGCCAGGCTGCGAATCCGGTGGCCTGCCATCACTGCAACAATGCCCCTTGCGTTACGGCTTGTCCGGTTAATGCTCTGACTTTCCAGTCCGATAGCGTACAACTGGACGAGCAAAAATGTATTGGTTGTAAAAGATGCGCAATCGCTTGCCCCTTTGGCGTCGTTGAGATGGTCGATACGATTGCGCAGAAATGCGACCTTTGTAACCAGCGCAGTTCCGGCACGCAAGCCTGTATTGAAGTTTGCCCAACACAGGCGTTACGACTGATGGACGATAAAGGGTTGCAGCAGATAAAGGTGGCCCGCCAGCGCAAAACGGCAGCAGGAAAAGCGTCATCAGACGCTCAGCCATCTCGCAGTGCAGCGTTGCTCCCCGTTAACTCGCGTAAAGGCGCAGATAAAATTTCAGCGAGTGAACGGAAAACCCACTTTGGCGAAATATATTGCGGGCTGGATCCACAACAAGCGACTTATGAGAGTGACCGCTGTGTTTATTGTGCCGAAAAAGCTAACTGCAACTGGCATTGCCCGCTGCATAACGCTATTCCGGATTACATCCGTCTGGTACAGGAAGGAAAGATTATTGAAGCGGCAGAACTTTGCCACCAGACCAGTTCCTTACCAGAAATTTGCGGCAGGGTATGTCCACAGGACCGTCTTTGTGAAGGCGCATGTACTTTGAAAGATCACTCGGGCGCAGTCTCTATCGGTAATCTGGAACGCTACATCACCGATACCGCGCTGGCGATGGGCTGGCGTCCCGATGTCAGCAAAGTTGTTCCCCGTAGCGAAAAAGTGGCGGTGATTGGCGCTGGGCCTGCAGGGTTAGGGTGTGCTGATATTCTGGCGCGCGCAGGAGTTCAGGTCGATGTCTTTGATCGCCATCCAGAAATTGGCGGTATGCTGACTTTTGGCATTCCTCCTTTCAAACTCGATAAAACGGTATTAAGCCAGCGGCGAGAGATATTCACCGCAATGGGAATCGACTTTCATCTTAACTGTGAAATTGGCCGCGATATTACCTTTAGCGATTTAACTTCTGAATATGATGCAGTTTTCATCGGCGTGGGGACTTACGGGATGATGCGAGCAGATCTGCCGCATGAAGATGCGCCCGGTGTCATTCAGGCTCTACCGTTCCTGACTGCCCATACCCGCCAGCTCATGGGATTGCCGGAGTCTGAAGAGTATCCGCTGACGGACGTGGAAGGTAAGCGAGTCGTGGTATTGGGCGGTGGCGATACGACAATGGATTGTTTGCGGACTTCCATCCGCCTCAATGCCGCCAGCGTGACCTGCGCGTATCGTCGTGATGAAGTCAGTATGCCGGGCTCGCGCAAAGAGGTGGTTAATGCGCGCGAGGAAGGTGTCGAGTTTCAGTTCAATGTTCAACCGCAATATATCGCTTGTGACGAAGATGGGCGTTTAACTGCGGTGGGCCTGATTCGTACCGCCATGGGTGAGCCGGGGCCGGATGGTCGCCGTCGTCCTCGTCCGGTAGCGGGTTCAGAGTTTGAATTGCCCGCCGATGTTCTGATTATGGCCTTTGGTTTCCAGGCGCATGCCATGCCGTGGTTGCAGGGCAGCGGAATTAAACTCGATAAATGGGGCCTGATTCAAACCGGTGACGTCGGGTATTTACCTACCCAGACGCATCTGAAAAAAGTCTTTGCTGGTGGTGATGCAGTTCATGGCGCGGATCTGGTTGTCACTGCAATGGCCGCAGGAAGGCAGGCGGCGCGCGATATGTTAACTCTGTTTGATACGAAGGCATCGTGA", - "dna_sequence_length": 1920, - "functions": [ - "putative oxidoreductase, Fe-S subunit/nucleotide-binding subunit" - ], - "id": "CDS_2843", - "location": [ - [ - "NC_000913", - 3030931, - "-", - 1920 - ] - ], - "md5": "6c3c05bd97d2a0bd03053d71e067d100", - "parent_gene": "", - "protein_md5": "5ea93aad0b0844cc73b8009d8460e9de", - "protein_translation": "MNKFIAAEAAECIGCHACEIACAVAHNQENWPLSHSDFRPRIHVVGKGQAANPVACHHCNNAPCVTACPVNALTFQSDSVQLDEQKCIGCKRCAIACPFGVVEMVDTIAQKCDLCNQRSSGTQACIEVCPTQALRLMDDKGLQQIKVARQRKTAAGKASSDAQPSRSAALLPVNSRKGADKISASERKTHFGEIYCGLDPQQATYESDRCVYCAEKANCNWHCPLHNAIPDYIRLVQEGKIIEAAELCHQTSSLPEICGRVCPQDRLCEGACTLKDHSGAVSIGNLERYITDTALAMGWRPDVSKVVPRSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDITFSDLTSEYDAVFIGVGTYGMMRADLPHEDAPGVIQALPFLTAHTRQLMGLPESEEYPLTDVEGKRVVVLGGGDTTMDCLRTSIRLNAASVTCAYRRDEVSMPGSRKEVVNAREEGVEFQFNVQPQYIACDEDGRLTAVGLIRTAMGEPGPDGRRRPRPVAGSEFELPADVLIMAFGFQAHAMPWLQGSGIKLDKWGLIQTGDVGYLPTQTHLKKVFAGGDAVHGADLVVTAMAAGRQAARDMLTLFDTKAS", - "protein_translation_length": 639, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2888" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46821" - ], - [ - "gene_synonym", - "ECK2883" - ], - [ - "gene_synonym", - "ASAP:ABE-0009478" - ], - [ - "gene_synonym", - "GI:90111510" - ], - [ - "gene_synonym", - "EcoGene:EG13071" - ], - [ - "gene_synonym", - "JW5470" - ], - [ - "gene_synonym", - "GeneID:949017" - ], - [ - "gene_synonym", - "ygfU" - ], - [ - "gene_synonym", - "uacT" - ], - [ - "gene_synonym", - "NP_417364.2" - ] - ], - "dna_sequence": "ATGAGCGCCATAGATTCCCAACTTCCCTCATCTTCTGGGCAAGACCGCCCAACTGATGAGGTTGACCGCATATTATCACCAGGAAAGCTGATCATACTCGGTCTGCAACACGTCCTTGTCATGTACGCAGGTGCAGTCGCTGTTCCTCTTATGATTGGTGACCGACTGGGCCTCTCAAAAGAAGCTATTGCGATGCTCATTAGCTCGGATCTCTTTTGCTGCGGGATCGTCACATTATTGCAATGTATCGGTATCGGCCGCTTTATGGGGATCCGCCTGCCGGTGATTATGTCGGTGACCTTTGCTGCTGTAACACCAATGATAGCCATTGGGATGAACCCGGATATCGGCCTGCTGGGGATATTTGGTGCCACTATCGCCGCGGGTTTTATCACCACATTATTAGCGCCACTTATCGGTCGCTTGATGCCTTTATTCCCGCCACTGGTTACCGGTGTGGTTATTACTTCTATCGGGCTTAGCATCATTCAGGTGGGTATTGACTGGGCCGCCGGAGGTAAAGGGAATCCGCAATATGGTAATCCCGTTTATTTAGGTATCTCCTTTGCCGTCTTAATTTTTATCTTGCTCATTACTCGCTATGCGAAAGGATTTATGTCCAACGTCGCCGTATTACTGGGGATTGTATTTGGCTTTTTACTTTCGTGGATGATGAATGAAGTCAATTTATCCGGGCTACATGATGCTTCATGGTTTGCGATTGTTACGCCGATGTCGTTTGGTATGCCGATTTTCGATCCCGTTTCCATTCTGACCATGACTGCCGTGTTAATCATCGTGTTTATCGAGTCAATGGGGATGTTCCTGGCACTGGGTGAAATAGTCGGTCGTAAACTCTCTTCGCACGATATTATTCGCGGGCTGCGTGTCGATGGCGTAGGGACAATGATAGGCGGCACGTTTAACAGCTTCCCCCACACGTCATTTTCTCAAAACGTTGGCCTGGTTAGCGTGACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCTCTCACGATTTCTTTTCTAAGTTACCGGCCGTACTGCAACCGCTGCTACATAGCGGCATTATGCTCGCAACCCTTAGCGCCGTTGTGCTGAACGTCTTCTTTAATGGCTATCAGCATCATGCTGACCTGGTGAAGGAATCCGTCTCTGATAAAGATTTAAAAGTCAGGACAGTACGTATGTGGCTTCTGATGCGCAAGCTGAAGAAAAATGAGCATGGAGAATAA", - "dna_sequence_length": 1449, - "functions": [ - "uric acid permease" - ], - "id": "CDS_2844", - "location": [ - [ - "NC_000913", - 3031367, - "+", - 1449 - ] - ], - "md5": "ac3ff118a18fb8919cf5e8f2798aebcc", - "parent_gene": "", - "protein_md5": "dcb56ab24fbe0d67496b35a5bb0bdf9a", - "protein_translation": "MSAIDSQLPSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAGAVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFAAVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGLSIIQVGIDWAAGGKGNPQYGNPVYLGISFAVLIFILLITRYAKGFMSNVAVLLGIVFGFLLSWMMNEVNLSGLHDASWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFLALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVCISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHADLVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE", - "protein_translation_length": 482, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14489" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P614" - ], - [ - "gene_synonym", - "GI:226524745" - ], - [ - "gene_synonym", - "YP_002791254.1" - ], - [ - "gene_synonym", - "ECK4499" - ], - [ - "gene_synonym", - "GeneID:7751638" - ], - [ - "gene_synonym", - "b4684" - ], - [ - "gene_synonym", - "yqfG" - ] - ], - "dna_sequence": "ATGAATTTTTTAATGCGCGCTATATTCAGTCTGTTGTTGCTTTTTACTCTCTCTATTCCTGTCATTTCTGACTGTGTTGCAATGGCCATTGAAAGTCGCTTCAAATATATGATGCTACTTTTTTAA", - "dna_sequence_length": 126, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2845", - "location": [ - [ - "NC_000913", - 3032817, - "+", - 126 - ] - ], - "md5": "f690aad51ee96e5b0821a43fed4d6f8c", - "parent_gene": "", - "protein_md5": "82ca49438c419af6e9e288df4d72ba66", - "protein_translation": "MNFLMRAIFSLLLLFTLSIPVISDCVAMAIESRFKYMMLLF", - "protein_translation_length": 41, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2889" - ], - [ - "gene_synonym", - "GI:16130791" - ], - [ - "gene_synonym", - "GeneID:949020" - ], - [ - "gene_synonym", - "JW2857" - ], - [ - "gene_synonym", - "EcoGene:EG13072" - ], - [ - "gene_synonym", - "ASAP:ABE-0009484" - ], - [ - "gene_synonym", - "ygfV" - ], - [ - "gene_synonym", - "ECK2884" - ], - [ - "gene_synonym", - "idi" - ], - [ - "gene_synonym", - "NP_417365.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46822" - ] - ], - "dna_sequence": "ATGCAAACGGAACACGTCATTTTATTGAATGCACAGGGAGTTCCCACGGGTACGCTGGAAAAGTATGCCGCACACACGGCAGACACCCGCTTACATCTCGCGTTCTCCAGTTGGCTGTTTAATGCCAAAGGACAATTATTAGTTACCCGCCGCGCACTGAGCAAAAAAGCATGGCCTGGCGTGTGGACTAACTCGGTTTGTGGGCACCCACAACTGGGAGAAAGCAACGAAGACGCAGTGATCCGCCGTTGCCGTTATGAGCTTGGCGTGGAAATTACGCCTCCTGAATCTATCTATCCTGACTTTCGCTACCGCGCCACCGATCCGAGTGGCATTGTGGAAAATGAAGTGTGTCCGGTATTTGCCGCACGCACCACTAGTGCGTTACAGATCAATGATGATGAAGTGATGGATTATCAATGGTGTGATTTAGCAGATGTATTACACGGTATTGATGCCACGCCGTGGGCGTTCAGTCCGTGGATGGTGATGCAGGCGACAAATCGCGAAGCCAGAAAACGATTATCTGCATTTACCCAGCTTAAATAA", - "dna_sequence_length": 549, - "functions": [ - "isopentenyl diphosphate isomerase" - ], - "id": "CDS_2846", - "location": [ - [ - "NC_000913", - 3033065, - "+", - 549 - ] - ], - "md5": "3f4584c774e864ca2eab4a32fe08c346", - "parent_gene": "", - "protein_md5": "8078ace0f4e9c5b402c1352a8af47c25", - "protein_translation": "MQTEHVILLNAQGVPTGTLEKYAAHTADTRLHLAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDPSGIVENEVCPVFAARTTSALQINDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQATNREARKRLSAFTQLK", - "protein_translation_length": 182, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130792" - ], - [ - "gene_synonym", - "herC" - ], - [ - "gene_synonym", - "b2890" - ], - [ - "gene_synonym", - "EcoGene:EG10552" - ], - [ - "gene_synonym", - "ASAP:ABE-0009486" - ], - [ - "gene_synonym", - "NP_417366.1" - ], - [ - "gene_synonym", - "asuD" - ], - [ - "gene_synonym", - "ECK2885" - ], - [ - "gene_synonym", - "GeneID:947372" - ], - [ - "gene_synonym", - "lysS" - ], - [ - "gene_synonym", - "JW2858" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8N3" - ] - ], - "dna_sequence": "ATGTCTGAACAACACGCACAGGGCGCTGACGCGGTAGTCGATCTTAACAATGAACTGAAAACGCGTCGTGAGAAGCTGGCGAACCTGCGCGAGCAGGGGATTGCCTTCCCGAACGATTTCCGTCGCGATCATACCTCTGACCAATTGCACGCAGAATTCGACGGCAAAGAGAACGAAGAACTGGAAGCGCTGAACATCGAAGTCGCCGTTGCTGGCCGCATGATGACCCGTCGTATTATGGGTAAAGCGTCTTTCGTTACCCTGCAGGACGTTGGCGGTCGCATTCAGCTGTACGTTGCCCGTGACGATCTCCCGGAAGGCGTTTATAACGAGCAGTTCAAAAAATGGGACCTCGGCGACATCCTCGGCGCGAAAGGTAAGCTGTTCAAAACCAAAACCGGCGAACTGTCTATCCACTGCACCGAGTTGCGTCTGCTGACCAAAGCACTGCGTCCGCTGCCGGATAAATTCCACGGCTTGCAGGATCAGGAAGCGCGCTATCGTCAGCGTTATCTCGATCTCATCTCCAACGATGAATCCCGCAACACCTTTAAAGTGCGCTCGCAGATCCTCTCTGGTATTCGCCAGTTCATGGTGAACCGCGGCTTTATGGAAGTTGAAACGCCGATGATGCAGGTGATCCCTGGCGGTGCCGCTGCGCGTCCGTTTATCACCCACCATAACGCGCTGGATCTCGACATGTACCTGCGTATCGCGCCGGAACTGTACCTCAAGCGTCTGGTGGTTGGTGGCTTCGAGCGTGTATTCGAAATCAACCGTAACTTCCGTAACGAAGGTATTTCCGTACGTCATAACCCAGAGTTCACCATGATGGAACTCTACATGGCTTACGCAGATTACAAAGATCTGATCGAGCTGACCGAATCGCTGTTCCGTACTCTGGCACAGGATATTCTCGGTAAGACGGAAGTGACCTACGGCGACGTGACGCTGGACTTCGGTAAACCGTTCGAAAAACTGACCATGCGTGAAGCGATCAAGAAATATCGCCCGGAAACCGACATGGCGGATCTGGACAACTTCGACTCTGCGAAAGCAATTGCTGAATCTATCGGCATCCACGTTGAGAAGAGCTGGGGTCTGGGCCGTATCGTTACCGAGATCTTCGAAGAAGTGGCAGAAGCACATCTGATTCAGCCGACCTTCATTACTGAATATCCGGCAGAAGTTTCTCCGCTGGCGCGTCGTAACGACGTTAACCCGGAAATCACAGACCGCTTTGAGTTCTTCATTGGTGGTCGTGAAATCGGTAACGGCTTTAGCGAGCTGAATGACGCGGAAGATCAGGCGCAACGCTTCCTGGATCAGGTTGCCGCGAAAGACGCAGGTGACGACGAAGCGATGTTCTACGATGAAGATTACGTCACCGCACTGGAACATGGCTTACCGCCGACAGCAGGTCTGGGAATTGGTATCGACCGTATGGTAATGCTGTTCACCAACAGCCATACCATCCGCGACGTTATTCTGTTCCCGGCGATGCGTCCGGTAAAATAA", 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"gene_synonym", - "EcoGene:EG10762" - ], - [ - "gene_synonym", - "ASAP:ABE-0009488" - ], - [ - "gene_synonym", - "b2891" - ], - [ - "gene_synonym", - "GeneID:947369" - ], - [ - "gene_synonym", - "supK" - ], - [ - "gene_synonym", - "ECK2886" - ], - [ - "gene_synonym", - "JW5847" - ], - [ - "gene_synonym", - "GI:16130793" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07012" - ] - ], - "dna_sequence": "ATGTTTGAAATTAATCCGGTAAATAATCGCATTCAGGACCTCACGGAACGCTCCGACGTTCTTAGGGGGTATCTTGACTACGACGCCAAGAAAGAGCGTCTGGAAGAAGTAAACGCCGAGCTGGAACAGCCGGATGTCTGGAACGAACCCGAACGCGCACAGGCGCTGGGTAAAGAGCGTTCCTCCCTCGAAGCCGTTGTCGACACCCTCGACCAAATGAAACAGGGGCTGGAAGATGTTTCTGGTCTGCTGGAACTGGCTGTAGAAGCTGACGACGAAGAAACCTTTAACGAAGCCGTTGCTGAACTCGACGCCCTGGAAGAAAAACTGGCGCAGCTTGAGTTCCGCCGTATGTTCTCTGGCGAATATGACAGCGCCGACTGCTACCTCGATATTCAGGCGGGGTCTGGCGGTACGGAAGCACAGGACTGGGCGAGCATGCTTGAGCGTATGTATCTGCGCTGGGCAGAATCGCGTGGTTTCAAAACTGAAATCATCGAAGAGTCGGAAGGTGAAGTGGCGGGTATTAAATCCGTGACGATCAAAATCTCCGGCGATTACGCTTACGGCTGGCTGCGTACAGAAACCGGCGTTCACCGCCTGGTGCGTAAAAGCCCGTTTGACTCCGGCGGTCGTCGCCACACGTCGTTCAGCTCCGCGTTTGTTTATCCGGAAGTTGATGATGATATTGATATCGAAATCAACCCGGCGGATCTGCGCATTGACGTTTATCGCACGTCCGGCGCGGGCGGTCAGCACGTTAACCGTACCGAATCTGCGGTGCGTATTACCCACATCCCGACCGGGATCGTGACCCAGTGCCAGAACGACCGTTCCCAGCACAAGAACAAAGATCAGGCCATGAAGCAGATGAAAGCGAAGCTTTATGAACTGGAGATGCAGAAGAAAAATGCCGAGAAACAGGCGATGGAAGATAACAAATCCGACATCGGCTGGGGCAGCCAGATTCGTTCTTATGTCCTTGATGACTCCCGCATTAAAGATCTGCGCACCGGGGTAGAAACCCGCAACACGCAGGCCGTGCTGGACGGCAGCCTGGATCAATTTATCGAAGCAAGTTTGAAAGCAGGGTTATGA", 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"gene_synonym", - "JW2860" - ], - [ - "gene_synonym", - "GeneID:947367" - ], - [ - "gene_synonym", - "ECK2887" - ], - [ - "gene_synonym", - "NP_417368.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21893" - ], - [ - "gene_synonym", - "EcoGene:EG10830" - ] - ], - "dna_sequence": "GTGAAACAACAGATACAACTTCGTCGCCGTGAAGTCGATGAAACGGCAGACTTGCCCGCTGAATTGCCTCCCTTGCTGCGCCGTTTATACGCCAGCCGGGGAGTACGCAGTGCGCAAGAACTGGAACGCAGTGTTAAAGGTATGCTGCCCTGGCAGCAACTGAGCGGCGTCGAAAAGGCCGTTGAGATCCTTTACAACGCTTTTCGCGAAGGAACGCGGATTATTGTGGTCGGTGATTTCGACGCCGACGGCGCGACCAGCACGGCTCTAAGCGTGCTGGCGATGCGCTCGCTTGGTTGCAGCAATATCGACTACCTGGTACCAAACCGTTTCGAAGACGGTTACGGCTTAAGCCCGGAAGTGGTCGATCAGGCCCATGCCCGTGGCGCGCAGTTAATTGTCACGGTGGATAACGGTATTTCCTCCCATGCGGGGGTTGAGCACGCTCGCTCGTTGGGCATCCCGGTTATTGTTACCGATCACCATTTGCCAGGCGACACATTACCCGCAGCGGAAGCGATCATTAACCCTAACTTGCGCGACTGTAATTTCCCGTCGAAATCACTGGCAGGCGTGGGTGTGGCGTTTTATCTGATGCTGGCGCTGCGCACCTTTTTGCGCGATCAGGGCTGGTTTGATGAGCGTAACATCGCAATTCCTAACCTGGCAGAACTGCTGGATCTGGTCGCGCTGGGGACAGTGGCGGACGTCGTGCCGCTGGACGCTAATAATCGCATTCTGACCTGGCAGGGGATGAGTCGCATCCGAGCCGGAAAGTGCCGTCCGGGGATTAAAGCGCTGCTTGAAGTGGCAAACCGTGATGCACAAAAACTCGCCGCCAGCGATTTAGGTTTTGCGCTGGGGCCACGTCTCAATGCTGCCGGACGACTGGACGATATGTCCGTCGGTGTGGCGCTGTTGTTGTGCGACAACATCGGCGAAGCGCGCGTGCTGGCAAATGAACTCGATGCGCTAAACCAGACGCGAAAAGAGATCGAACAAGGAATGCAAATTGAAGCCCTGACCCTGTGCGAGAAACTGGAGCGCAGCCGTGACACGCTACCCGGCGGGCTGGCAATGTATCACCCCGAATGGCATCAGGGCGTTGTCGGTATTCTGGCTTCGCGCATCAAAGAGCGTTTTCACCGTCCGGTTATCGCGTTTGCGCCAGCAGGTGACGGTACGCTGAAAGGTTCCGGTCGCTCCATTCAGGGGCTGCATATGCGTGATGCGCTGGAGCGATTAGACACACTCTACCCTGGCATGATGCTGAAGTTTGGCGGTCATGCGATGGCGGCGGGTTTGTCGCTGGAAGAGGATAAATTCAAACTCTTTCAACAACGGTTTGGCGAACTGGTTACTGAGTGGCTGGACCCTTCGCTATTGCAAGGCGAAGTGGTATCAGACGGTCCGTTAAGCCCGGCCGAAATGACCATGGAAGTGGCGCAGCTGCTGCGCGATGCTGGCCCGTGGGGGCAGATGTTCCCGGAGCCGCTGTTTGACGGTCATTTCCGTCTGCTGCAACAGCGGCTGGTGGGCGAACGTCATTTGAAGGTGATGGTCGAACCGGTCGGCGGCGGTCCACTGCTGGATGGTATTGCTTTTAATGTCGATACCGCCCTCTGGCCGGATAACGGCGTGCGCGAAGTGCAACTGGCTTATAAGCTCGATATCAACGAGTTTCGCGGCAACCGCAGCCTGCAAATTATCATCGACAATATCTGGCCAATTTAG", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P0AEG6" - ], - [ - "gene_synonym", - "NP_417369.1" - ], - [ - "gene_synonym", - "b2893" - ], - [ - "gene_synonym", - "JW2861" - ], - [ - "gene_synonym", - "xprA" - ], - [ - "gene_synonym", - "ASAP:ABE-0009494" - ], - [ - "gene_synonym", - "EcoGene:EG11070" - ], - [ - "gene_synonym", - "GeneID:947363" - ], - [ - "gene_synonym", - "dsbC" - ], - [ - "gene_synonym", - "ECK2888" - ], - [ - "gene_synonym", - "GI:16130795" - ] - ], - "dna_sequence": "ATGAAGAAAGGTTTTATGTTGTTTACTTTGTTAGCGGCGTTTTCAGGCTTTGCTCAGGCTGATGACGCGGCAATTCAACAAACGTTAGCCAAAATGGGCATCAAAAGCAGCGATATTCAGCCCGCGCCTGTAGCTGGCATGAAGACAGTTCTGACTAACAGCGGCGTGTTGTACATCACCGATGATGGTAAACATATCATTCAGGGGCCAATGTATGACGTTAGTGGCACGGCTCCGGTCAATGTCACCAATAAGATGCTGTTAAAGCAGTTGAATGCGCTTGAAAAAGAGATGATCGTTTATAAAGCGCCGCAGGAAAAACACGTCATCACCGTGTTTACTGATATTACCTGTGGTTACTGCCACAAACTGCATGAGCAAATGGCAGACTACAACGCGCTGGGGATCACCGTGCGTTATCTTGCTTTCCCGCGCCAGGGGCTGGACAGCGATGCAGAGAAAGAAATGAAAGCTATCTGGTGTGCGAAAGATAAAAACAAAGCGTTTGATGATGTGATGGCAGGTAAAAGCGTCGCACCAGCCAGTTGCGACGTGGATATTGCCGACCATTACGCACTTGGCGTCCAGCTTGGCGTTAGCGGTACTCCGGCAGTTGTGCTGAGCAATGGCACACTTGTTCCGGGTTACCAGCCGCCGAAAGAGATGAAAGAATTCCTCGACGAACACCAAAAAATGACCAGCGGTAAATAA", - "dna_sequence_length": 711, - "functions": [ - "protein disulfide isomerase II" - ], - "id": "CDS_2850", - "location": [ - [ - "NC_000913", - 3038822, - "-", - 711 - ] - ], - "md5": "31a412ef536f1f7b609b98f47418144b", - "parent_gene": "", - "protein_md5": "f57c9a3f968e1c498a2475a37bf5b8d9", - "protein_translation": "MKKGFMLFTLLAAFSGFAQADDAAIQQTLAKMGIKSSDIQPAPVAGMKTVLTNSGVLYITDDGKHIIQGPMYDVSGTAPVNVTNKMLLKQLNALEKEMIVYKAPQEKHVITVFTDITCGYCHKLHEQMADYNALGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPASCDVDIADHYALGVQLGVSGTPAVVLSNGTLVPGYQPPKEMKEFLDEHQKMTSGK", - "protein_translation_length": 236, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130796" - ], - [ - "gene_synonym", - "xprB" - ], - [ - "gene_synonym", - "JW2862" - ], - [ - "gene_synonym", - "ASAP:ABE-0009500" - ], - [ - "gene_synonym", - "b2894" - ], - [ - "gene_synonym", - "NP_417370.1" - ], - [ - "gene_synonym", - "GeneID:947362" - ], - [ - "gene_synonym", - "EcoGene:EG11071" - ], - [ - "gene_synonym", - "ECK2889" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8P8" - ], - [ - "gene_synonym", - "xerD" - ] - ], - "dna_sequence": "GTGAAACAGGATCTGGCACGCATCGAGCAGTTTCTTGATGCTCTGTGGCTGGAAAAAAATCTGGCTGAAAATACGTTGAACGCTTACCGTCGCGATCTGTCAATGATGGTGGAGTGGTTGCATCACCGCGGGTTGACGCTGGCGACGGCGCAAAGTGACGATTTGCAGGCATTACTGGCAGAACGGCTGGAGGGCGGGTATAAAGCCACCAGCTCAGCGCGTTTGCTGAGTGCAGTGCGCCGATTGTTCCAGTATCTTTATCGCGAAAAGTTTCGTGAAGACGATCCCAGTGCGCATCTCGCTTCACCGAAATTGCCCCAGCGTTTGCCAAAAGATTTAAGCGAAGCGCAGGTCGAACGTTTATTACAGGCACCATTAATCGATCAGCCACTGGAGCTACGCGATAAAGCCATGCTTGAAGTGTTGTATGCTACCGGGCTGCGTGTCTCTGAACTGGTCGGACTGACAATGAGTGATATCAGCCTGCGTCAGGGCGTGGTACGGGTCATTGGTAAAGGCAACAAAGAGCGTCTGGTGCCGTTAGGTGAAGAGGCGGTTTACTGGCTGGAAACCTATCTGGAACATGGGCGTCCGTGGCTGCTGAATGGTGTGTCAATTGACGTGTTGTTTCCCAGCCAGCGTGCGCAGCAGATGACGCGACAGACCTTCTGGCACCGTATTAAACATTATGCTGTGCTGGCGGGTATCGACAGCGAAAAGCTGTCACCGCATGTGTTGCGTCACGCTTTTGCCACTCATTTATTAAATCATGGTGCGGATTTACGCGTGGTGCAGATGCTACTGGGCCACAGCGATCTCTCCACCACGCAAATTTATACGCATGTCGCTACCGAGCGTCTGCGGCAACTTCATCAACAGCATCACCCGCGGGCGTGA", - "dna_sequence_length": 897, - "functions": [ - "site-specific tyrosine recombinase" - ], - "id": "CDS_2851", - "location": [ - [ - "NC_000913", - 3039743, - "-", - 897 - ] - ], - "md5": "fdf9a9e1a4b3ad7dc0e3bb3e7fcd71f6", - "parent_gene": "", - "protein_md5": "19bb021c0872a75af1e5c41f8abfa908", - "protein_translation": "MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA", - "protein_translation_length": 298, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417371.1" - ], - [ - "gene_synonym", - "GI:16130797" - ], - [ - "gene_synonym", - "JW2863" - ], - [ - "gene_synonym", - "ASAP:ABE-0009503" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABY4" - ], - [ - "gene_synonym", - "b2895" - ], - [ - "gene_synonym", - "EcoGene:EG12697" - ], - [ - "gene_synonym", - "ECK2890" - ], - [ - "gene_synonym", - "fldB" - ], - [ - "gene_synonym", - "GeneID:947361" - ] - ], - "dna_sequence": "ATGAATATGGGTCTTTTTTACGGTTCCAGCACCTGTTACACCGAAATGGCGGCAGAAAAAATCCGCGATATTATCGGCCCAGAACTGGTGACCTTACATAACCTCAAGGACGACTCCCCGAAATTAATGGAGCAGTACGATGTGCTCATTCTGGGTATCCCGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTCGACGACCTGAACCTTGAAGGTAAAATTGTTGCGCTGTATGGGCTTGGCGATCAACTGGGATACGGCGAGTGGTTCCTCGATGCGCTCGGTATGCTGCATGACAAACTCTCGACCAAAGGCGTGAAGTTCGTCGGCTACTGGCCAACGGAAGGATATGAATTTACCAGCCCGAAACCGGTGATTGCTGACGGGCAACTGTTCGTGGGTCTGGCGCTGGATGAAACTAACCAGTATGACCTTAGCGACGAGCGTATTCAGAGCTGGTGCGAGCAAATCCTCAACGAAATGGCAGAGCATTACGCCTGA", - "dna_sequence_length": 522, - "functions": [ - "flavodoxin 2" - ], - "id": "CDS_2852", - "location": [ - [ - "NC_000913", - 3039855, - "+", - 522 - ] - ], - "md5": "b09812f667492de05dce6d4f02079cdd", - "parent_gene": "", - "protein_md5": "bdb84d882dd9a33c97d64ebed39a9242", - "protein_translation": "MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLMEQYDVLILGIPTWDFGEIQEDWEAVWDQLDDLNLEGKIVALYGLGDQLGYGEWFLDALGMLHDKLSTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSWCEQILNEMAEHYA", - "protein_translation_length": 173, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46824" - ], - [ - "gene_synonym", - "GI:16130798" - ], - [ - "gene_synonym", - "b2896" - ], - [ - "gene_synonym", - "JW2864" - ], - [ - "gene_synonym", - "EcoGene:EG13074" - ], - [ - "gene_synonym", - "GeneID:947379" - ], - [ - "gene_synonym", - "ECK2891" - ], - [ - "gene_synonym", - "pigV" - ], - [ - "gene_synonym", - "cptA" - ], - [ - "gene_synonym", - "ygfX" - ], - [ - "gene_synonym", - "ASAP:ABE-0009505" - ], - [ - "gene_synonym", - "NP_417372.1" - ] - ], - "dna_sequence": "GTGGTCCTGTGGCAATCTGATTTGCGCGTCTCCTGGCGCGCACAGTGGCTTTCCTTGCTGATTCATGGGCTGGTTGCCGCTGTTATTTTACTCATGCCCTGGCCACTCAGTTACACCCCGTTATGGATGGTGTTACTTTCGCTGGTGGTGTTTGATTGCGTTCGCAGCCAGCGGCGTATTAATGCTCGCCAGGGGGAAATTCGCTTGTTGATGGACGGGCGTTTGCGTTGGCAAGGGCAGGAGTGGAGCATCGTCAAAGCACCGTGGATGATTAAGAGCGGCATGATGCTGCGTTTACGTTCTGATGGCGGTAAACGGCAACATTTATGGCTGGCAGCCGACAGCATGGACGAAGCTGAATGGCGGGATTTACGGCGGATTTTGTTGCAACAAGAGACGCAAAGATAA", - "dna_sequence_length": 408, - "functions": [ - "toxin of CptAB toxin-antitoxin pair" - ], - "id": "CDS_2853", - "location": [ - [ - "NC_000913", - 3040823, - "-", - 408 - ] - ], - "md5": "a6d07df873ab0b4ed654155584395ff6", - "parent_gene": "", - "protein_md5": "040999cfac27ed1554dd577503fef9d8", - "protein_translation": "MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMVLLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSDGGKRQHLWLAADSMDEAEWRDLRRILLQQETQR", - "protein_translation_length": 135, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13075" - ], - 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"b330dd0d8d2ee457f81455b137815914", - "parent_gene": "", - "protein_md5": "9c8f7929d68cfe51e355a10748a5d223", - "protein_translation": "MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFIRLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI", - "protein_translation_length": 88, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2898" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADE8" - ], - [ - "gene_synonym", - "yzzW" - ], - [ - "gene_synonym", - "EcoGene:EG12685" - ], - [ - "gene_synonym", - "NP_417374.1" - ], - [ - "gene_synonym", - "JW2866" - ], - [ - "gene_synonym", - "ASAP:ABE-0009512" - ], - [ - "gene_synonym", - "ECK2893" - ], - [ - "gene_synonym", - "ygfZ" - ], - [ - "gene_synonym", - "GI:16130800" - ], - [ - "gene_synonym", - "GeneID:947384" - ] - ], - "dna_sequence": "ATGGCTTTTACACCTTTTCCTCCCCGTCAGCCTACGGCTTCTGCCCGTTTACCGCTGACGCTGATGACGCTTGATGACTGGGCGCTTGCCACCATTACTGGCGCGGACAGCGAAAAATATATGCAGGGTCAGGTGACAGCAGATGTCAGCCAGATGGCAGAAGATCAGCACCTGCTCGCCGCCCATTGCGACGCCAAAGGTAAAATGTGGAGCAATTTACGTCTGTTCCGCGACGGCGATGGCTTTGCATGGATTGAACGGCGCAGCGTGCGTGAACCGCAGCTGACTGAACTGAAAAAATATGCGGTATTCTCTAAAGTGACCATCGCGCCAGACGACGAGCGTGTGCTGCTTGGTGTTGCCGGTTTTCAGGCGCGCGCCGCGCTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGTTTCCTGATCGTAACCGATGAAGCTACTGCTAATATGCTGACCGATAAACTGCGCGGTGAAGCGGAACTGAACAATAGCCAACAGTGGCTGGCATTAAACATTGAAGCGGGTTTCCCGGTGATTGATGCCGCCAACAGCGGGCAGTTTATCCCACAGGCGACCAATCTCCAGGCGCTGGGCGGTATCAGCTTTAAGAAAGGCTGTTATACCGGACAAGAGATGGTGGCGCGAGCAAAATTCCGTGGTGCCAATAAACGTGCGCTCTGGTTGCTGGCAGGTAGCGCCAGCCGACTGCCGGAAGCTGGTGAAGACTTAGAGCTGAAAATGGGCGAGAACTGGCGTCGTACCGGTACGGTACTGGCTGCGGTAAAACTGGAAGATGGTCAGGTCGTGGTACAGGTCGTCATGAATAACGATATGGAACCGGATAGCATCTTCCGCGTACGCGACGATGCGAATACATTGCATATCGAGCCGCTGCCGTATTCGCTCGAAGAGTAA", - 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- ], - [ - "gene_synonym", - "ECK2894" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67153" - ], - [ - "gene_synonym", - "GeneID:947381" - ], - [ - "gene_synonym", - "yqfA" - ] - ], - "dna_sequence": "ATGGTTCAGAAGCCCCTCATTAAGCAGGGATATTCACTGGCAGAGGAAATAGCCAACAGCGTCAGTCACGGCATTGGGTTGGTGTTTGGTATCGTTGGGCTGGTGTTGCTACTGGTTCAGGCGGTGGATCTTAATGCCAGCGCCACAGCGATAACCAGCTACAGCCTCTATGGCGGCAGTATGATCCTGCTGTTCCTCGCTTCGACGCTCTATCACGCCATTCCTCATCAACGGGCAAAAATGTGGCTGAAGAAATTTGACCATTGCGCTATTTACCTGTTGATTGCCGGAACCTACACGCCGTTTTTGCTGGTGGGGCTGGATTCTCCGTTAGCGCGCGGGTTGATGATTGTTATCTGGAGCCTGGCATTGCTGGGTATTCTGTTTAAACTGACCATCGCGCACCGATTCAAAATTTTATCTCTGGTGACCTATCTGGCGATGGGCTGGCTGTCGCTGGTGGTAATTTATGAAATGGCAGTTAAGCTCGCGGCGGGCAGCGTTACCTTACTGGCGGTAGGCGGCGTGGTTTATTCGCTCGGGGTGATTTTCTACGTCTGCAAACGCATTCCATACAACCATGCCATCTGGCACGGCTTCGTGCTCGGCGGTAGTGTGTGCCACTTTCTGGCGATCTATTTGTATATTGGGCAGGCGTAA", - "dna_sequence_length": 660, - "functions": [ - "hemolysin III family HylIII inner membrane protein" - ], - "id": "CDS_2856", - "location": [ - [ - "NC_000913", - 3043148, - "-", - 660 - ] - ], - "md5": "505440135743e4e535b02356978913d1", - "parent_gene": "", - "protein_md5": "e0325ef50a69a1d0c677adb2e29fff2d", - "protein_translation": "MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDLNASATAITSYSLYGGSMILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPFLLVGLDSPLARGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMAVKLAAGSVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYIGQA", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2868" - ], - [ - "gene_synonym", - "EcoGene:EG13078" - ], - [ - "gene_synonym", - "ASAP:ABE-0009518" - ], - [ - "gene_synonym", - "b2900" - ], - [ - "gene_synonym", - "ECK2895" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67603" - ], - [ - "gene_synonym", - "yqfB" - ], - [ - "gene_synonym", - "NP_417376.1" - ], - [ - "gene_synonym", - "GeneID:947380" - ], - [ - "gene_synonym", - "GI:16130802" - ] - ], - "dna_sequence": "ATGCAGCCAAACGACATCACTTTTTTTCAACGTTTCCAGGATGACATTCTGGCTGGGCGTAAAACCATCACCATCCGCGACGAGTCTGAATCGCACTTCAAAACGGGTGATGTGCTTCGTGTCGGACGTTTTGAAGATGACGGTTATTTTTGCACGATTGAAGTCACCGCAACCTCAACCGTAACGCTGGATACGCTGACTGAAAAACATGCAGAGCAGGAAAATATGACCCTGACTGAACTGAAAAAAGTCATTGCTGACATCTATCCCGGTCAGACACAATTTTATGTGATTGAATTTAAATGTCTTTAA", - "dna_sequence_length": 312, - "functions": [ - "UPF0267 family protein" - ], - "id": "CDS_2857", - "location": [ - [ - "NC_000913", - 3043623, - "-", - 312 - ] - ], - "md5": "5c7b636fef3b05863bf70919ffcce86a", - "parent_gene": "", - "protein_md5": "30c48302e638b3496e2461afa67977b4", - "protein_translation": "MQPNDITFFQRFQDDILAGRKTITIRDESESHFKTGDVLRVGRFEDDGYFCTIEVTATSTVTLDTLTEKHAEQENMTLTELKKVIADIYPGQTQFYVIEFKCL", - "protein_translation_length": 103, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947378" - ], - [ - "gene_synonym", - "JW2869" - ], - [ - "gene_synonym", - "EcoGene:EG13079" - ], - [ - "gene_synonym", - "ASAP:ABE-0009523" - ], - [ - "gene_synonym", - "bglA" - ], - [ - "gene_synonym", - "b2901" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46829" - ], - [ - "gene_synonym", - "bglD" - ], - [ - "gene_synonym", - "ECK2896" - ], - [ - "gene_synonym", - "GI:16130803" - ], - [ - "gene_synonym", - "NP_417377.1" - ], - [ - "gene_synonym", - "yqfC" - ] - ], - "dna_sequence": "ATGATAGTGAAAAAACTCACCTTACCGAAAGATTTCTTATGGGGCGGCGCAGTTGCCGCTCATCAGGTCGAAGGCGGCTGGAACAAAGGCGGAAAAGGGCCGAGCATTTGTGACGTTCTGACCGGTGGCGCACACGGCGTGCCGCGCGAAATCACCAAAGAAGTCTTGCCAGGAAAATACTATCCAAACCATGAAGCCGTTGATTTTTATGGTCACTATAAGGAAGACATCAAGCTATTTGCCGAAATGGGCTTCAAATGTTTTCGTACATCCATTGCCTGGACGCGCATTTTTCCAAAAGGCGATGAAGCTCAGCCAAACGAAGAAGGGCTGAAGTTCTACGATGATATGTTCGATGAACTGCTGAAATACAACATCGAACCGGTGATCACCCTCTCCCACTTTGAAATGCCGCTGCATCTGGTGCAGCAATACGGTAGCTGGACCAACCGTAAAGTGGTTGATTTCTTTGTACGTTTCGCGGAAGTGGTATTTGAACGCTATAAGCACAAAGTCAAATACTGGATGACCTTCAACGAAATTAACAACCAGCGTAACTGGCGTGCACCGCTGTTCGGTTACTGCTGCTCCGGCGTGGTGTATACCGAGCATGAAAACCCGGAAGAGACGATGTATCAGGTGCTGCATCACCAGTTTGTCGCCAGCGCCCTGGCGGTGAAAGCTGCGCGTCGCATTAACCCGGAGATGAAAGTCGGCTGTATGCTGGCGATGGTGCCGCTCTATCCTTACTCCTGTAACCCGGACGATGTGATGTTCGCTCAGGAGTCGATGCGCGAACGCTACGTCTTTACCGATGTGCAGCTACGCGGCTATTACCCGTCCTATGTGTTGAACGAGTGGGAGCGTCGCGGATTTAACATCAAAATGGAAGACGGCGATCTGGATGTGCTGCGTGAAGGCACCTGCGATTATCTTGGTTTCAGCTATTACATGACCAATGCAGTGAAGGCCGAAGGCGGCACCGGCGATGCGATCTCTGGTTTTGAAGGCAGCGTACCAAACCCGTATGTTAAAGCATCTGACTGGGGCTGGCAGATTGATCCAGTAGGTCTGCGCTATGCACTTTGCGAACTGTATGAGCGTTATCAGAGGCCGCTGTTTATTGTCGAAAACGGTTTTGGCGCTTACGACAAAGTGGAAGAAGATGGCAGCATCAACGACGACTACCGCATTGACTACCTGCGCGCCCATATCGAAGAGATGAAAAAAGCGGTGACTTACGATGGCGTGGATCTGATGGGCTACACACCGTGGGGCTGCATCGACTGCGTGTCGTTCACCACCGGGCAGTACAGCAAACGCTACGGCTTTATCTATGTGAATAAACATGACGACGGTACTGGCGATATGTCGCGTTCACGTAAGAAGAGCTTTAACTGGTACAAAGAGGTGATTGCCAGCAACGGCGAGAAGCTTTAA", 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"EcoGene:EG12971" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52037" - ], - [ - "gene_synonym", - "b2902" - ], - [ - "gene_synonym", - "JW2870" - ], - [ - "gene_synonym", - "GI:16130804" - ], - [ - "gene_synonym", - "ECK2897" - ], - [ - "gene_synonym", - "GeneID:947373" - ], - [ - "gene_synonym", - "NP_417378.1" - ], - [ - "gene_synonym", - "yqfD" - ] - ], - "dna_sequence": "ATGGCTATAGCACTTGTGACTGGTGGCAGTCGCGGCATCGGGCGGGCAACTGCATTACTGTTGGCGCAAGAAGGGTATACGGTGGCGGTTAATTATCAGCAAAACCTCCACGCGGCGCAGGAAGTGATGAACTTAATAACGCAAGCCGGTGGCAAAGCATTCGTGCTCCAGGCGGATATCAGCGACGAAAACCAGGTCGTTGCGATGTTTACAGCAATCGATCAGCACGATGAACCGCTAGCAGCGCTGGTCAATAACGCCGGGATCTTGTTTACCCAGTGCACCGTTGAAAACCTTACCGCAGAGCGAATCAACCGAGTACTTTCCACCAACGTGACGGGATATTTTCTCTGCTGCCGCGAGGCGGTAAAACGCATGGCGCTTAAAAATGGTGGCAGTGGCGGCGCTATCGTCAATGTCTCTTCGGTGGCCTCACGGTTGGGTTCGCCAGGGGAATATGTTGATTACGCGGCATCGAAAGGGGCGATTGATACGTTAACCACCGGACTATCGCTGGAAGTCGCCGCGCAGGGGATCCGCGTTAACTGCGTGCGGCCAGGGTTTATTTATACCGAAATGCACGCCAGCGGCGGCGAGCCTGGACGCGTCGATCGCGTTAAGTCGAACATCCCCATGCAGCGTGGTGGACAGGCAGAAGAGGTCGCGCAGGCCATTGTCTGGCTACTAAGTGATAAAGCCTCTTACGTCACGGGAAGTTTTATCGATTTGGCGGGCGGGAAATAA", - "dna_sequence_length": 744, - "functions": [ - "putative NAD(P)-dependent oxidoreductase" - ], - "id": "CDS_2859", - "location": [ - [ - "NC_000913", - 3045901, - "-", - 744 - ] - ], - "md5": "8afaf7d16f761f683b24ec8ada5a77c3", - "parent_gene": "", - "protein_md5": "ccd6c0609ef3268c36678771b2f0f322", - "protein_translation": "MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVMNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQAEEVAQAIVWLLSDKASYVTGSFIDLAGGK", - "protein_translation_length": 247, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009531" - ], - [ - "gene_synonym", - "gcvP" - ], - [ - "gene_synonym", - "NP_417379.1" - ], - [ - "gene_synonym", - "b2903" - ], - [ - "gene_synonym", - "JW2871" - ], - [ - "gene_synonym", - "GeneID:947394" - ], - [ - "gene_synonym", - "EcoGene:EG11810" - ], - [ - "gene_synonym", - "GI:16130805" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33195" - ], - [ - "gene_synonym", - "ECK2898" - ] - ], - "dna_sequence": "ATGACACAGACGTTAAGCCAGCTTGAAAACAGCGGCGCTTTTATTGAACGCCATATCGGACCGGACGCCGCGCAACAGCAAGAAATGCTGAATGCCGTTGGTGCACAATCGTTAAACGCGCTGACCGGCCAGATTGTGCCGAAAGATATTCAACTTGCGACACCACCGCAGGTTGGCGCACCGGCGACCGAATACGCCGCACTGGCAGAACTCAAGGCTATTGCCAGTCGCAATAAACGCTTCACGTCTTACATCGGCATGGGTTACACCGCCGTGCAGCTACCGCCGGTTATCCTGCGTAACATGCTGGAAAATCCGGGCTGGTATACCGCGTACACTCCGTATCAACCTGAAGTCTCCCAGGGCCGCCTTGAAGCACTGCTCAACTTCCAGCAGGTAACGCTGGATTTGACTGGACTGGATATGGCCTCTGCTTCTCTTCTGGACGAGGCCACCGCTGCCGCCGAAGCAATGGCGATGGCGAAACGCGTCAGCAAACTGAAAAATGCCAACCGCTTCTTCGTGGCTTCCGATGTGCATCCGCAAACGCTGGATGTGGTCCGTACTCGTGCCGAAACCTTTGGTTTTGAAGTGATTGTCGATGACGCGCAAAAAGTGCTCGACCATCAGGACGTCTTCGGCGTGCTGTTACAGCAGGTAGGCACTACCGGTGAAATTCACGACTACACTGCGCTTATTAGCGAACTGAAATCACGCAAAATTGTGGTCAGCGTTGCCGCCGATATTATGGCGCTGGTGCTGTTAACTGCGCCGGGTAAACAGGGCGCGGATATTGTTTTTGGTTCGGCGCAACGCTTCGGCGTGCCGATGGGCTACGGTGGCCCACACGCGGCATTCTTTGCGGCGAAAGATGAATACAAACGCTCAATGCCGGGCCGTATTATCGGTGTATCGAAAGATGCAGCTGGCAATACCGCGCTGCGCATGGCGATGCAGACTCGCGAGCAACATATCCGCCGTGAGAAAGCGAACTCCAACATTTGTACTTCCCAGGTACTGCTGGCAAACATCGCCAGCCTGTATGCCGTTTATCACGGCCCGGTTGGCCTGAAACGTATCGCTAACCGCATTCACCGTCTGACCGATATCCTGGCGGCGGGCCTGCAACAAAAAGGTCTGAAACTGCGCCATGCGCACTATTTCGACACCTTGTGTGTGGAAGTGGCCGACAAAGCGGGCGTACTGACGCGTGCCGAAGCGGCTGAAATCAACCTGCGTAGCGATATTCTGAACGCGGTTGGGATCACCCTTGATGAAACAACCACGCGTGAAAACGTAATGCAGCTTTTCAACGTGCTGCTGGGCGATAACCACGGCCTGGACATCGACACGCTGGACAAAGACGTGGCTCACGACAGCCGCTCTATCCAGCCTGCGATGCTGCGCGACGACGAAATCCTCACCCATCCGGTGTTTAATCGCTACCACAGCGAAACCGAAATGATGCGCTATATGCACTCGCTGGAGCGTAAAGATCTGGCGCTGAATCAGGCGATGATCCCGCTGGGTTCCTGCACCATGAAACTGAACGCCGCCGCCGAGATGATCCCAATCACCTGGCCGGAATTTGCCGAACTGCACCCGTTCTGCCCGCCGGAGCAGGCCGAAGGTTATCAGCAGATGATTGCGCAGCTGGCTGACTGGCTGGTGAAACTGACCGGTTACGACGCCGTTTGTATGCAGCCGAACTCTGGCGCACAGGGCGAATACGCGGGCCTGCTGGCGATTCGTCATTATCATGAAAGCCGCAACGAAGGGCATCGCGATATCTGCCTGATCCCGGCTTCTGCGCACGGAACTAACCCCGCTTCTGCACATATGGCAGGAATGCAGGTGGTGGTTGTGGCGTGTGATAAAAACGGCAACATCGATCTGACTGATCTGCGCGCGAAAGCGGAACAGGCGGGCGATAACCTCTCCTGTATCATGGTGACTTATCCTTCTACCCACGGCGTGTATGAAGAAACGATCCGTGAAGTGTGTGAAGTCGTGCATCAGTTCGGCGGTCAGGTTTACCTTGATGGCGCGAACATGAACGCCCAGGTTGGCATCACCTCGCCGGGCTTTATTGGTGCGGACGTTTCACACCTTAACCTACATAAAACTTTCTGCATTCCGCACGGCGGTGGTGGTCCGGGTATGGGACCGATCGGCGTGAAAGCGCATTTGGCACCGTTTGTACCGGGTCATAGCGTGGTGCAAATCGAAGGCATGTTAACCCGTCAGGGCGCGGTTTCTGCGGCACCGTTCGGTAGCGCCTCTATCCTGCCAATCAGCTGGATGTACATCCGCATGATGGGCGCAGAAGGGCTGAAAAAAGCAAGCCAGGTGGCAATCCTCAACGCCAACTATATTGCCAGCCGCCTGCAGGATGCCTTCCCGGTGCTGTATACCGGTCGCGACGGTCGCGTGGCGCACGAATGTATTCTCGATATTCGCCCGCTGAAAGAAGAAACCGGCATCAGCGAGCTGGATATTGCCAAGCGCCTGATCGACTACGGTTTCCACGCGCCGACGATGTCGTTCCCGGTGGCGGGTACGCTGATGGTTGAACCGACTGAATCTGAAAGCAAAGTGGAACTGGATCGCTTTATCGACGCGATGCTGGCTATCCGCGCAGAAATTGACCAGGTGAAAGCCGGTGTCTGGCCGCTGGAAGATAACCCGCTGGTGAACGCGCCGCACATTCAGAGCGAACTGGTCGCCGAGTGGGCGCATCCGTACAGCCGTGAAGTTGCGGTATTCCCGGCAGGTGTGGCAGACAAATACTGGCCGACAGTGAAACGTCTGGATGATGTTTACGGCGACCGTAACCTGTTCTGCTCCTGCGTACCGATTAGCGAATACCAGTAA", - "dna_sequence_length": 2874, - "functions": [ - "glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex" - ], - "id": "CDS_2860", - "location": [ - [ - "NC_000913", - 3049041, - "-", - 2874 - ] - ], - "md5": "a6a2ca63ec786d58724c745b52dc4620", - "parent_gene": "", - "protein_md5": "4e97c2068758d0076cc2d47bb6638ecd", - "protein_translation": "MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQIVPKDIQLATPPQVGAPATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPPVILRNMLENPGWYTAYTPYQPEVSQGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAMAKRVSKLKNANRFFVASDVHPQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQQVGTTGEIHDYTALISELKSRKIVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKDEYKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVYHGPVGLKRIANRIHRLTDILAAGLQQKGLKLRHAHYFDTLCVEVADKAGVLTRAEAAEINLRSDILNAVGITLDETTTRENVMQLFNVLLGDNHGLDIDTLDKDVAHDSRSIQPAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVACDKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKKASQVAILNANYIASRLQDAFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAEWAHPYSREVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISEYQ", - "protein_translation_length": 957, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009534" - ], - [ - "gene_synonym", - "NP_417380.1" - ], - [ - "gene_synonym", - "b2904" - ], - [ - "gene_synonym", - "JW2872" - ], - [ - "gene_synonym", - "gcvH" - ], - [ - "gene_synonym", - "EcoGene:EG10371" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6T9" - ], - [ - "gene_synonym", - "GI:16130806" - ], - [ - "gene_synonym", - "ECK2899" - ], - [ - "gene_synonym", - "GeneID:947393" - ] - ], - "dna_sequence": "ATGAGCAACGTACCAGCAGAACTGAAATACAGCAAAGAACACGAATGGCTGCGTAAAGAAGCCGACGGCACTTACACCGTTGGTATTACCGAACATGCTCAGGAGCTGTTAGGCGATATGGTGTTTGTTGACCTGCCGGAAGTGGGCGCAACGGTTAGCGCGGGCGATGACTGCGCGGTTGCCGAATCGGTAAAAGCGGCGTCAGACATTTATGCGCCAGTAAGCGGTGAAATCGTGGCGGTAAACGACGCACTGAGCGATTCCCCGGAACTGGTGAACAGCGAACCGTATGCAGGCGGCTGGATCTTTAAAATCAAAGCCAGCGATGAAAGCGAACTGGAATCACTGCTGGATGCGACCGCATACGAAGCATTGTTAGAAGACGAGTAA", - "dna_sequence_length": 390, - "functions": [ - "glycine cleavage complex lipoylprotein" - ], - "id": "CDS_2861", - "location": [ - [ - "NC_000913", - 3049549, - "-", - 390 - ] - ], - "md5": "6da845b42a3dfd9ce8ca3354b58b791f", - "parent_gene": "", - "protein_md5": "b8d23914181ff55fc2280029e8189235", - "protein_translation": "MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE", - "protein_translation_length": 129, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009536" - ], - [ - "gene_synonym", - "ECK2900" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27248" - ], - [ - "gene_synonym", - "EcoGene:EG11442" - ], - [ - "gene_synonym", - "gcvT" - ], - [ - "gene_synonym", - "b2905" - ], - [ - "gene_synonym", - "JW2873" - ], - [ - "gene_synonym", - "NP_417381.1" - ], - [ - "gene_synonym", - "GeneID:947390" - ], - [ - "gene_synonym", - "GI:16130807" - ] - ], - "dna_sequence": "ATGGCACAACAGACTCCTTTGTACGAACAACACACGCTTTGCGGCGCTCGCATGGTGGATTTCCACGGCTGGATGATGCCGCTGCATTACGGTTCGCAAATCGACGAACATCATGCGGTACGTACCGATGCCGGAATGTTTGATGTGTCACATATGACCATCGTCGATCTTCGCGGCAGCCGCACCCGGGAGTTTCTGCGTTATCTGCTGGCGAACGATGTGGCGAAGCTCACCAAAAGCGGCAAAGCCCTTTACTCGGGGATGTTGAATGCCTCTGGCGGTGTGATAGATGACCTCATCGTCTACTACTTTACTGAAGATTTCTTCCGCCTCGTTGTTAACTCCGCCACCCGCGAAAAAGACCTCTCCTGGATTACCCAACACGCTGAACCTTTCGGCATCGAAATTACCGTTCGTGATGACCTTTCCATGATTGCCGTGCAAGGGCCGAATGCGCAGGCAAAAGCTGCCACACTGTTTAATGACGCCCAGCGTCAGGCGGTGGAAGGGATGAAACCGTTCTTTGGCGTGCAGGCGGGCGATCTGTTTATTGCCACCACTGGTTATACCGGTGAAGCGGGCTATGAAATTGCGCTGCCCAATGAAAAAGCGGCCGATTTCTGGCGTGCGCTGGTGGAAGCGGGTGTTAAGCCATGTGGCTTGGGCGCGCGTGACACGCTGCGTCTGGAAGCGGGCATGAATCTTTATGGTCAGGAGATGGACGAAACCATCTCTCCTTTAGCCGCCAACATGGGCTGGACCATCGCCTGGGAACCGGCAGATCGTGACTTTATCGGTCGTGAAGCCCTGGAAGTGCAGCGTGAGCATGGTACAGAAAAACTGGTTGGTCTGGTGATGACCGAAAAAGGCGTGCTGCGTAATGAACTGCCGGTACGCTTTACCGATGCGCAGGGCAACCAGCATGAAGGCATTATCACCAGCGGTACTTTCTCCCCGACGCTGGGTTACAGCATTGCGCTGGCGCGCGTGCCGGAAGGTATTGGCGAAACGGCGATTGTGCAAATTCGCAACCGTGAAATGCCGGTTAAAGTGACAAAACCTGTTTTTGTGCGTAACGGCAAAGCCGTCGCGTGA", - "dna_sequence_length": 1095, - "functions": [ - "aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex" - ], - "id": "CDS_2862", - "location": [ - [ - "NC_000913", - 3050667, - "-", - 1095 - ] - ], - "md5": "c3408ae41bd34053d68b98e4374aeab5", - "parent_gene": "", - "protein_md5": "84044b10cc38bdc6b5a13d1ae107b0b9", - "protein_translation": "MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDAGMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVYYFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLFNDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKPCGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIAWEPADRDFIGREALEVQREHGTEKLVGLVMTEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGIGETAIVQIRNREMPVKVTKPVFVRNGKAVA", - "protein_translation_length": 364, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2901" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25535" - ], - [ - "gene_synonym", - "JW2874" - ], - [ - "gene_synonym", - "b2906" - ], - [ - "gene_synonym", - "visC" - ], - [ - "gene_synonym", - "GeneID:947389" - ], - [ - "gene_synonym", - "GI:16130808" - ], - [ - "gene_synonym", - "EcoGene:EG11333" - ], - [ - "gene_synonym", - "ubiI" - ], - [ - "gene_synonym", - "NP_417382.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009543" - ] - ], - "dna_sequence": "ATGCAAAGTGTTGATGTAGCCATTGTTGGCGGCGGCATGGTGGGGCTGGCGGTTGCCTGTGGCTTACAGGGGAGCGGCTTACGCGTTGCCGTACTGGAGCAGCGCGTACAGGAACCTCTGGCGGCGAATGCACCACCACAACTGCGCGTTTCGGCTATCAATGCCGCCAGCGAAAAATTACTCACCCGTCTTGGCGTCTGGCAGGACATTCTCTCTCGTAGGGCCAGCTGTTATCACGGTATGGAAGTGTGGGACAAAGACAGCTTTGGTCACATTTCGTTTGACGATCAAAGCATGGGCTATAGCCATCTTGGGCATATCGTTGAAAATTCAGTGATTCACTACGCGCTGTGGAACAAAGCGCATCAGTCGTCAGATATCACTCTGTTAGCCCCCGCAGAATTACAGCAGGTCGCCTGGGGAGAAAATGAAACCTTCCTGACGCTGAAAGATGGCAGCATGTTAACGGCGCGTCTGGTGATTGGCGCGGACGGCGCTAATTCCTGGTTGCGCAACAAAGCCGATATTCCGCTGACTTTCTGGGATTATCAGCATCACGCGCTGGTAGCGACCATTCGCACGGAAGAACCGCATGATGCGGTGGCGCGGCAGGTTTTCCATGGCGAAGGCATTCTGGCCTTTTTACCGCTTAGCGATCCGCATCTTTGCTCGATTGTCTGGTCACTGTCGCCAGAGGAAGCGCAGCGGATGCAGCAGGCAAGTGAAGACGAATTTAATCGCGCGTTAAATATCGCTTTTGATAATCGCCTGGGCTTATGCAAGGTTGAGAGCGCGCGTCAGGTGTTCCCACTGACGGGGCGTTATGCGCGCCAGTTTGCCTCGCACCGTCTGGCGCTGGTGGGCGACGCCGCACATACCATTCACCCGCTGGCGGGGCAGGGGGTAAATCTCGGCTTTATGGATGCTGCAGAGCTGATTGCCGAACTGAAACGGTTGCATCGTCAGGGGAAAGACATCGGGCAGTACATTTATCTGCGTCGCTATGAGCGTAGCCGCAAGCACAGTGCGGCGTTGATGCTGGCTGGTATGCAGGGATTCCGCGATCTGTTTTCCGGTACCAATCCGGCGAAAAAACTGCTGCGTGATATTGGTTTGAAACTGGCCGACACGCTTCCTGGCGTTAAGCCGCAACTTATCCGCCAGGCAATGGGATTAAACGATTTGCCTGAATGGCTGCGTTAA", - "dna_sequence_length": 1203, - "functions": [ - "2-octaprenylphenol hydroxylase, FAD-dependent" - ], - "id": "CDS_2863", - "location": [ - [ - "NC_000913", - 3052317, - "-", - 1203 - ] - ], - "md5": "b76c2140aee8a2c76a07c397c97a6f1c", - "parent_gene": "", - "protein_md5": "00fef402125bf2619fb9208e93848dac", - "protein_translation": "MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVQEPLAANAPPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYSHLGHIVENSVIHYALWNKAHQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLVIGADGANSWLRNKADIPLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLSDPHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYARQFASHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRRYERSRKHSAALMLAGMQGFRDLFSGTNPAKKLLRDIGLKLADTLPGVKPQLIRQAMGLNDLPEWLR", - "protein_translation_length": 400, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2902" - ], - [ - "gene_synonym", - "EcoGene:EG11324" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25534" - ], - [ - "gene_synonym", - "NP_417383.1" - ], - [ - "gene_synonym", - "acd" - ], - [ - "gene_synonym", - "JW2875" - ], - [ - "gene_synonym", - "b2907" - ], - [ - "gene_synonym", - "visB" - ], - [ - "gene_synonym", - "GeneID:947388" - ], - [ - "gene_synonym", - "GI:16130809" - ], - [ - "gene_synonym", - "ubiH" - ], - [ - "gene_synonym", - "ASAP:ABE-0009545" - ] - ], - "dna_sequence": "ATGAGCGTAATCATCGTCGGTGGCGGCATGGCGGGCGCGACGCTGGCGCTGGCTATTTCCCGGTTAAGTCACGGGGCGCTGCCGGTACATTTGATTGAAGCGACTGCGCCAGAGTCACATGCTCATCCGGGCTTTGATGGACGAGCGATAGCGCTGGCGGCGGGTACCTGTCAGCAACTGGCGCGCATCGGCGTCTGGCAATCTCTGGCGGATTGCGCAACTGCCATCACCACCGTGCATGTCAGCGATCGTGGTCACGCTGGATTTGTCACCCTCGCCGCAGAAGATTACCAACTGGCGGCGCTGGGACAGGTTGTCGAATTGCACAATGTCGGGCAACGGCTGTTTGCATTGCTGCGTAAAGCACCTGGCGTAACGCTGCATTGCCCTGATCGCGTGGCTAACGTTGCCCGTACTCAGAGTCACGTTGAAGTGACGCTGGAGAGTGGCGAGACGCTGACGGGCCGCGTGCTGGTAGCAGCTGATGGCACCCATTCAGCGTTAGCCACCGCGTGCGGCGTTGACTGGCAGCAGGAGCCTTACGAACAACTGGCCGTGATTGCCAACGTTGCTACTTCCGTTGCGCATGAAGGGCGCGCTTTTGAACGCTTTACGCAACATGGCCCGCTGGCGATGTTGCCGATGTCTGACGGACGCTGTTCGCTGGTCTGGTGTCATCCACTGGAACGGCGCGAAGAGGTGTTGTCGTGGAGTGACGAGAAGTTTTGCCGTGAACTCCAGTCGGCCTTTGGCTGGCGACTTGGGAAAATTACCCACGCTGGTAAACGCAGTGCTTATCCGCTGGCGTTAACCCACGCCGCCAGATCTATTACCCATCGTACCGTGCTGGTGGGCAATGCGGCGCAAACTCTGCACCCGATTGCCGGGCAAGGGTTTAACCTCGGTATGCGAGATGTGATGAGTCTTGCGGAAACCCTGACTCAGGCGCAGGAGCGCGGAGAAGACATGGGGGATTACGGCGTATTGTGCCGTTATCAGCAGCGTCGACAGAGCGATCGCGAAGCAACCATTGGCGTCACGGACAGCCTTGTACATCTTTTTGCCAACCGTTGGGCACCGCTGGTTGTCGGGCGCAACATCGGGCTGATGACGATGGAATTATTCACCCCGGCACGCGATGTGCTGGCGCAGCGCACCCTCGGTTGGGTGGCGCGTTGA", - "dna_sequence_length": 1179, - "functions": [ - "2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding" - ], - "id": "CDS_2864", - "location": [ - [ - "NC_000913", - 3053518, - "-", - 1179 - ] - ], - "md5": "2e1fac36cbfaa4bd148a1ba18c612f6f", - "parent_gene": "", - "protein_md5": "ea5d81083025be29c0eabd8699a37484", - "protein_translation": "MSVIIVGGGMAGATLALAISRLSHGALPVHLIEATAPESHAHPGFDGRAIALAAGTCQQLARIGVWQSLADCATAITTVHVSDRGHAGFVTLAAEDYQLAALGQVVELHNVGQRLFALLRKAPGVTLHCPDRVANVARTQSHVEVTLESGETLTGRVLVAADGTHSALATACGVDWQQEPYEQLAVIANVATSVAHEGRAFERFTQHGPLAMLPMSDGRCSLVWCHPLERREEVLSWSDEKFCRELQSAFGWRLGKITHAGKRSAYPLALTHAARSITHRTVLVGNAAQTLHPIAGQGFNLGMRDVMSLAETLTQAQERGEDMGDYGVLCRYQQRRQSDREATIGVTDSLVHLFANRWAPLVVGRNIGLMTMELFTPARDVLAQRTLGWVAR", - "protein_translation_length": 392, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2908" - ], - [ - "gene_synonym", - "ECK2903" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15034" - ], - [ - "gene_synonym", - "JW2876" - ], - [ - "gene_synonym", - "EcoGene:EG10697" - ], - [ - "gene_synonym", - "NP_417384.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009549" - ], - [ - "gene_synonym", - "pepP" - ], - [ - "gene_synonym", - "GeneID:947385" - ], - [ - "gene_synonym", - "GI:16130810" - ] - ], - "dna_sequence": "ATGAGTGAGATATCCCGGCAAGAGTTTCAGCGTCGCCGTCAGGCCCTGGTGGAGCAAATGCAACCCGGCAGCGCCGCGCTGATTTTTGCTGCACCAGAAGTAACACGTAGCGCCGACAGCGAATACCCCTATCGTCAGAACAGTGACTTCTGGTACTTCACCGGCTTTAACGAACCGGAAGCGGTGCTGGTGCTGATTAAAAGCGATGACACTCATAACCACAGCGTTCTGTTTAACCGCGTTCGCGACCTGACGGCGGAGATCTGGTTTGGCCGTCGCTTAGGCCAGGATGCCGCGCCAGAGAAACTGGGCGTTGACCGCGCACTGGCATTCAGCGAAATCAATCAGCAACTTTATCAACTACTTAACGGCCTGGATGTGGTTTACCATGCCCAGGGCGAATATGCATATGCTGATGTAATCGTGAACAGTGCGCTGGAAAAACTGCGTAAAGGTTCGCGGCAAAATCTCACCGCACCGGCAACGATGATCGACTGGCGTCCTGTTGTTCATGAAATGCGCCTGTTCAAATCGCCAGAAGAGATTGCCGTACTCCGCCGCGCGGGAGAAATCACCGCCATGGCACATACACGGGCGATGGAAAAATGCCGTCCGGGAATGTTCGAGTACCATCTGGAAGGCGAAATTCACCACGAATTTAACCGCCACGGTGCGCGCTATCCGTCCTATAACACCATTGTCGGCAGCGGTGAAAACGGCTGCATTCTGCACTACACCGAAAACGAGTGTGAAATGCGCGACGGCGACCTGGTGTTGATTGACGCGGGTTGTGAATACAAAGGTTACGCTGGCGATATTACCCGCACCTTCCCGGTCAACGGCAAATTCACCCAGGCCCAGCGTGAAATCTACGACATTGTGCTGGAGTCTCTCGAAACCAGCCTGCGCCTGTATCGTCCGGGAACTTCCATTCTGGAAGTCACTGGTGAAGTGGTGCGCATCATGGTTAGCGGCCTGGTAAAACTCGGCATCCTGAAAGGTGATGTTGATGAACTGATCGCTCAGAACGCCCATCGTCCTTTCTTTATGCATGGCCTTAGCCACTGGTTAGGACTGGATGTCCATGACGTGGGTGTTTATGGTCAGGATCGCTCGCGCATTCTGGAACCGGGCATGGTACTGACCGTAGAGCCAGGGCTGTATATTGCGCCGGATGCAGAAGTGCCAGAACAATATCGCGGTATCGGCATTCGTATTGAAGACGACATTGTGATTACCGAAACCGGTAACGAAAACCTCACCGCCAGCGTGGTGAAAAAGCCGGAAGAAATCGAAGCGTTGATGGTTGCTGCGAGAAAGCAATGA", 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"gene_synonym", - "GeneID:947400" - ], - [ - "gene_synonym", - "EcoGene:EG11323" - ], - [ - "gene_synonym", - "JW5473" - ], - [ - "gene_synonym", - "ASAP:ABE-0009551" - ], - [ - "gene_synonym", - "NP_417385.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8C4" - ] - ], - "dna_sequence": "ATGTCTATACAGAACGAAATGCCTGGTTACAACGAAATGAACCAGTATCTGAACCAACAAGGGACGGGTCTGACCCCAGCTGAGATGCATGGTTTAATCAGCGGGATGATATGTGGCGGTAACGATGACAGCTCATGGCTACCGCTACTTCACGACCTGACGAACGAAGGCATGGCTTTCGGTCATGAGCTGGCACAGGCACTGCGTAAAATGCACTCTGCCACCAGCGATGCCCTGCAGGATGACGGCTTCCTTTTTCAGCTTTATCTGCCTGATGGCGATGATGTCAGCGTTTTCGATCGGGCTGATGCATTGGCAGGTTGGGTCAATCACTTCCTGCTTGGTCTTGGCGTTACGCAACCGAAGCTGGATAAAGTGACCGGCGAAACCGGTGAAGCTATCGACGATCTGCGTAACATTGCGCAACTGGGTTACGACGAAGACGAAGATCAGGAAGAGCTTGAAATGTCGCTTGAAGAGATCATCGAATACGTTCGTGTTGCCGCGCTGTTATGCCACGACACCTTTACTCATCCGCAACCGACCGCGCCAGAAGTACAAAAACCGACTCTACACTAA", - "dna_sequence_length": 579, - "functions": [ - "UPF0149 family protein" - ], - "id": "CDS_2866", - "location": [ - [ - "NC_000913", - 3055444, - "-", - 579 - ] - ], - "md5": "ef51fe21fdb15aa9328bab844c7577f5", - "parent_gene": "", - "protein_md5": "11e1d8245e2b527575eb233365f89e9b", - "protein_translation": "MSIQNEMPGYNEMNQYLNQQGTGLTPAEMHGLISGMICGGNDDSSWLPLLHDLTNEGMAFGHELAQALRKMHSATSDALQDDGFLFQLYLPDGDDVSVFDRADALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDEDEDQEELEMSLEEIIEYVRVAALLCHDTFTHPQPTAPEVQKPTLH", - "protein_translation_length": 192, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417386.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009554" - ], - [ - "gene_synonym", - "ECK2905" - ], - [ - "gene_synonym", - "ygfE" - ], - [ - "gene_synonym", - "GeneID:947404" - ], - [ - "gene_synonym", - "EcoGene:EG12878" - ], - [ - "gene_synonym", - "b2910" - ], - [ - "gene_synonym", - "zapA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADS2" - ], - [ - "gene_synonym", - "JW2878" - ], - [ - "gene_synonym", - "GI:16130812" - ] - ], - "dna_sequence": "ATGTCTGCACAACCCGTCGATATCCAAATTTTTGGCCGTTCACTGCGTGTGAACTGCCCGCCTGACCAAAGGGATGCGTTGAATCAGGCAGCGGACGATCTGAACCAACGGTTGCAAGATCTGAAAGAACGCACTAGAGTCACAAATACTGAACAGTTGGTCTTCATTGCCGCATTGAATATCAGCTATGAGTTAGCGCAAGAAAAAGCAAAGACTCGTGACTACGCGGCAAGTATGGAACAGCGTATTCGGATGCTGCAGCAGACCATAGAACAAGCGTTACTTGAACAAGGTCGCATCACCGAAAAAACTAACCAAAACTTTGAATGA", - "dna_sequence_length": 330, - "functions": [ - "FtsZ stabilizer" - ], - "id": "CDS_2867", - "location": [ - [ - "NC_000913", - 3055612, - "+", - 330 - ] - ], - "md5": "3100a24e542ae86fcf3f46020e8f24d9", - "parent_gene": "", - "protein_md5": "c676d7a5e37881537273eca495577ba4", - "protein_translation": "MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKERTRVTNTEQLVFIAALNISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITEKTNQNFE", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygfA" - ], - [ - "gene_synonym", - "ECK2907" - ], - [ - "gene_synonym", - "JW2879" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC28" - ], - [ - "gene_synonym", - "ASAP:ABE-0009559" - ], - [ - "gene_synonym", - "b2912" - ], - [ - "gene_synonym", - "fau" - ], - [ - "gene_synonym", - "EcoGene:EG11158" - ], - [ - "gene_synonym", - "NP_417387.3" - ], - [ - "gene_synonym", - "GI:49176282" - ], - [ - "gene_synonym", - "GeneID:945167" - ] - ], - "dna_sequence": "ATGATTCGGCAACGTCGTCGTGCGTTAACGCCGGAACAACAGCAGGAAATGGGTCAACAAGCCGCTACCCGGATGATGACTTATCCCCCGGTGGTGATGGCACATACGGTCGCTGTATTCCTCTCTTTTGATGGCGAACTCGACACCCAGCCACTCATAGAACAACTCTGGCGCGCCGGTAAGCGCGTATATCTTCCAGTTTTGCATCCCTTTAGTGCCGGTAATTTGCTGTTCCTGAATTACCATCCGCAAAGCGAACTGGTGATGAACAGGTTGAAGATCCATGAGCCAAAATTGGATGTGCGTGACGTGCTACCCCTTTCCCGATTAGACGTGCTGATCACACCGCTGGTCGCCTTTGATGAGTACGGTCAGCGCCTGGGAATGGGCGGTGGTTTTTATGATCGGACCTTACAAAACTGGCAGCACTATAAAACGCAACCGGTGGGTTATGCGCATGATTGTCAGTTGGTGGAAAAACTCCCCGTTGAAGAGTGGGATATCCCTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAA", - "dna_sequence_length": 549, - "functions": [ - "5-formyltetrahydrofolate cyclo-ligase family protein" - ], - "id": "CDS_2868", - "location": [ - [ - "NC_000913", - 3056241, - "+", - 549 - ] - ], - "md5": "f65d30fd4615072db225d5b32257638e", - "parent_gene": "", - "protein_md5": "1307f52b0de9a0f37ffbb7b5e25a8476", - "protein_translation": "MIRQRRRALTPEQQQEMGQQAATRMMTYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHYKTQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVWEW", - "protein_translation_length": 182, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:7751627" - ], - [ - "gene_synonym", - "GI:226524746" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P615" - ], - [ - "gene_synonym", - "YP_002791255.1" - ], - [ - "gene_synonym", - "ibsC" - ], - [ - "gene_synonym", - "b4665" - ], - [ - "gene_synonym", - "EcoGene:EG14470" - ], - [ - "gene_synonym", - "ECK4480" - ] - ], - "dna_sequence": "ATGATGCGACTTGTCATCATACTGATTGTACTGTTACTCATAAGTTTCAGCGCTTATTAA", - "dna_sequence_length": 60, - "functions": [ - "toxic membrane protein" 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"ATGGCAAAGGTATCGCTGGAGAAAGACAAGATTAAGTTTCTGCTGGTAGAAGGCGTGCACCAAAAGGCGCTGGAAAGCCTTCGTGCAGCTGGTTACACCAACATCGAATTTCACAAAGGCGCGCTGGATGATGAACAATTAAAAGAATCCATCCGCGATGCCCACTTCATCGGCCTGCGATCCCGTACCCATCTGACTGAAGACGTGATCAACGCCGCAGAAAAACTGGTCGCTATTGGCTGTTTCTGTATCGGAACAAACCAGGTTGATCTGGATGCGGCGGCAAAGCGCGGGATCCCGGTATTTAACGCACCGTTCTCAAATACGCGCTCTGTTGCGGAGCTGGTGATTGGCGAACTGCTGCTGCTATTGCGCGGCGTGCCGGAAGCCAATGCTAAAGCGCACCGTGGCGTGTGGAACAAACTGGCGGCGGGTTCTTTTGAAGCGCGCGGCAAAAAGCTGGGTATCATCGGCTACGGTCATATTGGTACGCAATTGGGCATTCTGGCTGAATCGCTGGGAATGTATGTTTACTTTTATGATATTGAAAATAAACTGCCGCTGGGCAACGCCACTCAGGTACAGCATCTTTCTGACCTGCTGAATATGAGCGATGTGGTGAGTCTGCATGTACCAGAGAATCCGTCCACCAAAAATATGATGGGCGCGAAAGAAATTTCACTAATGAAGCCCGGCTCGCTGCTGATTAATGCTTCGCGCGGTACTGTGGTGGATATTCCGGCGCTGTGTGATGCGCTGGCGAGCAAACATCTGGCGGGGGCGGCAATCGACGTATTCCCGACGGAACCGGCGACCAATAGCGATCCATTTACCTCTCCGCTGTGTGAATTCGACAACGTCCTTCTGACGCCACACATTGGCGGTTCGACTCAGGAAGCGCAGGAGAATATCGGCCTGGAAGTTGCGGGTAAATTGATCAAGTATTCTGACAATGGCTCAACGCTCTCTGCGGTGAACTTCCCGGAAGTCTCGCTGCCACTGCACGGTGGGCGTCGTCTGATGCACATCCACGAAAACCGTCCGGGCGTGCTAACTGCGCTGAACAAAATCTTCGCCGAGCAGGGCGTCAACATCGCCGCGCAATATCTGCAAACTTCCGCCCAGATGGGTTATGTGGTTATTGATATTGAAGCCGACGAAGACGTTGCCGAAAAAGCGCTGCAGGCAATGAAAGCTATTCCGGGTACCATTCGCGCCCGTCTGCTGTACTAA", 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- "gene_synonym", - "GeneID:947407" - ], - [ - "gene_synonym", - "b2914" - ], - [ - "gene_synonym", - "NP_417389.1" - ], - [ - "gene_synonym", - "JW5475" - ], - [ - "gene_synonym", - "rpiA" - ], - [ - "gene_synonym", - "GI:16130815" - ], - [ - "gene_synonym", - "ASAP:ABE-0009567" - ] - ], - "dna_sequence": "ATGACGCAGGATGAATTGAAAAAAGCAGTAGGATGGGCGGCACTTCAGTATGTTCAGCCCGGCACCATTGTTGGTGTAGGTACAGGTTCCACCGCCGCACACTTTATTGACGCGCTCGGTACAATGAAAGGCCAGATTGAAGGGGCCGTTTCCAGTTCAGATGCTTCCACTGAAAAACTGAAAAGCCTCGGCATTCACGTTTTTGATCTCAACGAAGTCGACAGCCTTGGCATCTACGTTGATGGCGCAGATGAAATCAACGGCCACATGCAAATGATCAAAGGCGGCGGCGCGGCGCTGACCCGTGAAAAAATCATTGCTTCGGTTGCAGAAAAATTTATCTGTATTGCAGACGCTTCCAAGCAGGTTGATATTCTGGGTAAATTCCCGCTGCCAGTAGAAGTTATCCCGATGGCACGTAGTGCAGTGGCGCGTCAGCTGGTGAAACTGGGCGGTCGTCCGGAATACCGTCAGGGCGTGGTGACCGATAATGGCAACGTGATCCTCGACGTCCACGGCATGGAAATCCTTGACCCGATAGCGATGGAAAACGCCATAAATGCGATTCCTGGCGTGGTGACTGTTGGCTTGTTTGCTAACCGTGGCGCGGACGTTGCGCTGATTGGCACACCTGACGGTGTCAAAACCATTGTGAAATGA", - "dna_sequence_length": 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"TGTGTCAGGTTGCATATACCGAAGCCGTCGGCGGGTAACATTTGTATCCGTGGTTAAAAGCGCAGCTTAAAAGATCAGGGATTTGCGCTAATGCATTTCGCTCAGCGAGTTCGCGCCCTGGTTGTGTTGAATGGCGTGGCGTTATTGCCTCAATTTGCCTGTAAACAGGGGCTTGCGAACGGTGAACTGGTGCGCCTGTTTGCACCGTGGAGCGGCATACCCAGACCGTTGTATGCTTTATTTGCGGGGCGAAAGGGGATGCCTGCCATTGCGCGATATTTTATGGATGAGTTAACCACGCGGCTTGCCAACGGGGTCTGA", - "dna_sequence_length": 321, - "id": "CDS_2872", - "location": [ - [ - "NC_000913", - 3059701, - "-", - 321 - ] - ], - "md5": "f5ae81b83370fe4b0dec2aed42b99007", - "parent_gene": "", - "protein_md5": "064f5e6c3ecdc0188b2853cc2a9dbf82", - "protein_translation": "CVRLHIPKPSAGNICIRG", - "protein_translation_length": 18, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2912" - ], - [ - "gene_synonym", - "NP_417391.1" - ], - [ - "gene_synonym", - "JW2883" - ], - [ - "gene_synonym", - "iciA" - ], - [ - "gene_synonym", - "EcoGene:EG10490" - ], - [ - "gene_synonym", - "argP" - ], - [ - "gene_synonym", - "b2916" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8S1" - ], - [ - "gene_synonym", - "GeneID:944867" - ], - [ - "gene_synonym", - "canR" - ], - [ - "gene_synonym", - "can" - ], - [ - "gene_synonym", - "GI:16130817" - ], - [ - "gene_synonym", - "ASAP:ABE-0009574" - ] - ], - "dna_sequence": "ATGAAACGCCCGGACTACAGAACATTACAGGCACTGGATGCGGTGATACGTGAACGAGGATTTGAGCGCGCGGCACAAAAGCTGTGCATTACACAATCAGCCGTCTCACAGCGCATTAAGCAACTGGAAAATATGTTCGGGCAGCCGCTGTTGGTGCGTACCGTACCGCCGCGCCCGACGGAACAAGGGCAAAAACTGCTGGCACTGCTGCGCCAGGTGGAGTTGCTGGAAGAAGAGTGGCTGGGCGATGAACAAACCGGTTCGACTCCGCTGCTGCTTTCACTGGCGGTCAACGCCGACAGTCTGGCGACGTGGTTGCTTCCTGCACTGGCTCCTGTGTTGGCTGATTCGCCTATCCGCCTCAACTTGCAGGTAGAAGATGAAACCCGCACTCAGGAACGTCTGCGCCGCGGCGAAGTGGTCGGCGCGGTGAGTATTCAACATCAGGCGCTGCCGAGTTGTCTTGTCGATAAACTTGGTGCGCTCGACTATCTGTTCGTCAGCTCAAAACCCTTTGCCGAAAAATATTTCCCTAACGGCGTAACGCGTTCGGCATTACTGAAAGCGCCAGTGGTCGCGTTTGACCATCTTGACGATATGCACCAGGCCTTTTTGCAGCAAAACTTCGATCTGCCTCCAGGCAGCGTGCCCTGCCATATCGTTAATTCTTCAGAAGCGTTCGTACAACTTGCTCGCCAGGGCACCACCTGCTGTATGATCCCGCACCTGCAAATCGAGAAAGAGCTGGCCAGCGGTGAACTGATTGACTTAACGCCTGGGCTATTTCAACGACGGATGCTCTACTGGCACCGCTTTGCTCCTGAAAGCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAA", - "dna_sequence_length": 894, - "functions": [ - "transcriptional regulator for arginine transport and DNA replication genes", - "replication initiation inhibitor" - ], - "id": "CDS_2873", - "location": [ - [ - "NC_000913", - 3059753, - "+", - 894 - ] - ], - "md5": "3b304efe2fd45f88f9b271c236f6ef11", - "parent_gene": "", - "protein_md5": "83bddd0a987410c35d7911df4a93d36f", - "protein_translation": "MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSLATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD", - "protein_translation_length": 297, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2884" - ], - [ - "gene_synonym", - "mcm" - ], - [ - "gene_synonym", - "ECK2913" - ], - [ - "gene_synonym", - "b2917" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27253" - ], - [ - "gene_synonym", - "yliK" - ], - [ - "gene_synonym", - "EcoGene:EG11444" - ], - [ - "gene_synonym", - "NP_417392.1" - ], - [ - "gene_synonym", - "GeneID:945576" - ], - [ - "gene_synonym", - "GI:16130818" - ], - [ - "gene_synonym", - "scpA" - ], - [ - "gene_synonym", - "ASAP:ABE-0009577" - ], - [ - "gene_synonym", - "sbm" - ] - ], - "dna_sequence": "ATGTCTAACGTGCAGGAGTGGCAACAGCTTGCCAACAAGGAATTGAGCCGTCGGGAGAAAACTGTCGACTCGCTGGTTCATCAAACCGCGGAAGGGATCGCCATCAAGCCGCTGTATACCGAAGCCGATCTCGATAATCTGGAGGTGACAGGTACCCTTCCTGGTTTGCCGCCCTACGTTCGTGGCCCGCGTGCCACTATGTATACCGCCCAACCGTGGACCATCCGTCAGTATGCTGGTTTTTCAACAGCAAAAGAGTCCAACGCTTTTTATCGCCGTAACCTGGCCGCCGGGCAAAAAGGTCTTTCCGTTGCGTTTGACCTTGCCACCCACCGTGGCTACGACTCCGATAACCCGCGCGTGGCGGGCGACGTCGGCAAAGCGGGCGTCGCTATCGACACCGTGGAAGATATGAAAGTCCTGTTCGACCAGATCCCGCTGGATAAAATGTCGGTTTCGATGACCATGAATGGCGCAGTGCTACCAGTACTGGCGTTTTATATCGTCGCCGCAGAAGAGCAAGGTGTTACACCTGATAAACTGACCGGCACCATTCAAAACGATATTCTCAAAGAGTACCTCTGCCGCAACACCTATATTTACCCACCAAAACCGTCAATGCGCATTATCGCCGACATCATCGCCTGGTGTTCCGGCAACATGCCGCGATTTAATACCATCAGTATCAGCGGTTACCACATGGGTGAAGCGGGTGCCAACTGCGTGCAGCAGGTAGCATTTACGCTCGCTGATGGGATTGAGTACATCAAAGCAGCAATCTCTGCCGGACTGAAAATTGATGACTTCGCTCCTCGCCTGTCGTTCTTCTTCGGCATCGGCATGGATCTGTTTATGAACGTCGCCATGTTGCGTGCGGCACGTTATTTATGGAGCGAAGCGGTCAGTGGATTTGGCGCACAGGACCCGAAATCACTGGCGCTGCGTACCCACTGCCAGACCTCAGGCTGGAGCCTGACTGAACAGGATCCGTATAACAACGTTATCCGCACCACCATTGAAGCGCTGGCTGCGACGCTGGGCGGTACTCAGTCACTGCATACCAACGCCTTTGACGAAGCGCTTGGTTTGCCTACCGATTTCTCAGCACGCATTGCCCGCAACACCCAGATCATCATCCAGGAAGAATCAGAACTCTGCCGCACCGTCGATCCACTGGCCGGATCCTATTACATTGAGTCGCTGACCGATCAAATCGTCAAACAAGCCAGAGCTATTATCCAACAGATCGACGAAGCCGGTGGCATGGCGAAAGCGATCGAAGCAGGTCTGCCAAAACGAATGATCGAAGAGGCCTCAGCGCGCGAACAGTCGCTGATCGACCAGGGCAAGCGTGTCATCGTTGGTGTCAACAAGTACAAACTGGATCACGAAGACGAAACCGATGTACTTGAGATCGACAACGTGATGGTGCGTAACGAGCAAATTGCTTCGCTGGAACGCATTCGCGCCACCCGTGATGATGCCGCCGTAACCGCCGCGTTGAACGCCCTGACTCACGCCGCACAGCATAACGAAAACCTGCTGGCTGCCGCTGTTAATGCCGCTCGCGTTCGCGCCACCCTGGGTGAAATTTCCGATGCGCTGGAAGTCGCTTTCGACCGTTATCTGGTGCCAAGCCAGTGTGTTACCGGCGTGATTGCGCAAAGCTATCATCAGTCTGAGAAATCGGCCTCCGAGTTCGATGCCATTGTTGCGCAAACGGAGCAGTTCCTTGCCGACAATGGTCGTCGCCCGCGCATTCTGATCGCTAAGATGGGCCAGGATGGACACGATCGCGGCGCGAAAGTGATCGCCAGCGCCTATTCCGATCTCGGTTTCGACGTAGATTTAAGCCCGATGTTCTCTACACCTGAAGAGATCGCCCGCCTGGCCGTAGAAAACGACGTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCGGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATAAGCCAGCATCATGATTAA", 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"MSNVQEWQQLANKELSRREKTVDSLVHQTAEGIAIKPLYTEADLDNLEVTGTLPGLPPYVRGPRATMYTAQPWTIRQYAGFSTAKESNAFYRRNLAAGQKGLSVAFDLATHRGYDSDNPRVAGDVGKAGVAIDTVEDMKVLFDQIPLDKMSVSMTMNGAVLPVLAFYIVAAEEQGVTPDKLTGTIQNDILKEYLCRNTYIYPPKPSMRIIADIIAWCSGNMPRFNTISISGYHMGEAGANCVQQVAFTLADGIEYIKAAISAGLKIDDFAPRLSFFFGIGMDLFMNVAMLRAARYLWSEAVSGFGAQDPKSLALRTHCQTSGWSLTEQDPYNNVIRTTIEALAATLGGTQSLHTNAFDEALGLPTDFSARIARNTQIIIQEESELCRTVDPLAGSYYIESLTDQIVKQARAIIQQIDEAGGMAKAIEAGLPKRMIEEASAREQSLIDQGKRVIVGVNKYKLDHEDETDVLEIDNVMVRNEQIASLERIRATRDDAAVTAALNALTHAAQHNENLLAAAVNAARVRATLGEISDALEVAFDRYLVPSQCVTGVIAQSYHQSEKSASEFDAIVAQTEQFLADNGRRPRILIAKMGQDGHDRGAKVIASAYSDLGFDVDLSPMFSTPEEIARLAVENDVHVVGASSLAAGHKTLIPELVEALKKWGREDICVVAGGVIPPQDYAFLQERGVAAIYGPGTPMLDSVRDVLNLISQHHD", - "protein_translation_length": 714, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2885" - ], - [ - "gene_synonym", - "ECK2914" - ], - [ - "gene_synonym", - "GI:16130819" - ], - [ - "gene_synonym", - "ygfD" - ], - [ - "gene_synonym", - "b2918" - ], - [ - "gene_synonym", - "scpK?" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27254" - ], - [ - "gene_synonym", - "GeneID:947412" - ], - [ - "gene_synonym", - "EcoGene:EG11445" - ], - [ - "gene_synonym", - "ASAP:ABE-0009579" - ], - [ - "gene_synonym", - "meaB" - ], - [ - "gene_synonym", - "NP_417393.1" - ], - [ - "gene_synonym", - "argK" - ] - ], - "dna_sequence": "ATGATTAATGAAGCCACGCTGGCAGAAAGTATTCGCCGCTTACGTCAGGGTGAGCGTGCCACACTCGCCCAGGCCATGACGCTGGTGGAAAGCCGTCACCCGCGTCATCAGGCACTAAGTACGCAGCTGCTTGATGCCATTATGCCGTACTGCGGTAACACCCTGCGACTGGGCGTTACCGGCACCCCCGGCGCGGGGAAAAGTACCTTTCTTGAGGCCTTTGGCATGTTGTTGATTCGAGAGGGATTAAAGGTCGCGGTTATTGCGGTCGATCCCAGCAGCCCGGTCACTGGCGGTAGCATTCTCGGGGATAAAACCCGCATGAATGACCTGGCGCGTGCCGAAGCGGCGTTTATTCGCCCGGTACCATCCTCCGGTCATCTGGGCGGTGCCAGTCAGCGAGCGCGGGAATTAATGCTGTTATGCGAAGCAGCGGGTTATGACGTAGTGATTGTCGAAACGGTTGGCGTCGGGCAGTCGGAAACAGAAGTCGCCCGCATGGTGGACTGTTTTATCTCGTTGCAAATTGCCGGTGGCGGCGATGATCTGCAGGGCATTAAAAAAGGGCTGATGGAAGTGGCTGATCTGATCGTTATCAACAAAGACGATGGCGATAACCATACCAATGTCGCCATTGCCCGGCATATGTACGAGAGTGCCCTGCATATTCTGCGACGTAAATACGACGAATGGCAGCCACGGGTTCTGACTTGTAGCGCACTGGAAAAACGTGGAATCGATGAGATCTGGCACGCCATCATCGACTTCAAAACCGCGCTAACTGCCAGTGGTCGTTTACAACAAGTGCGGCAACAACAATCGGTGGAATGGCTGCGTAAGCAGACCGAAGAAGAAGTACTGAATCACCTGTTCGCGAATGAAGATTTCGATCGCTATTACCGCCAGACGCTTTTAGCGGTCAAAAACAATACGCTCTCACCGCGCACCGGCCTGCGGCAGCTCAGTGAATTTATCCAGACGCAATATTTTGATTAA", - "dna_sequence_length": 996, - "functions": [ - "membrane ATPase/protein kinase" - ], - "id": "CDS_2875", - "location": [ - [ - "NC_000913", - 3062987, - "+", - 996 - ] - ], - "md5": "96a0b17f9fe4bdc8dd4708cd1981e9ca", - "parent_gene": "", - "protein_md5": "73ab7404676a644bb2cc33b95892cb53", - "protein_translation": "MINEATLAESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLLDAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYESALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIDFKTALTASGRLQQVRQQQSVEWLRKQTEEEVLNHLFANEDFDRYYRQTLLAVKNNTLSPRTGLRQLSEFIQTQYFD", - "protein_translation_length": 331, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417394.4" - ], - [ - "gene_synonym", - "GeneID:947408" - ], - [ - "gene_synonym", - "JW2886" - ], - [ - "gene_synonym", - "EcoGene:EG12972" - ], - [ - "gene_synonym", - "ygfG" - ], - [ - "gene_synonym", - "b2919" - ], - [ - "gene_synonym", - "GI:90111512" - ], - [ - "gene_synonym", - "ASAP:ABE-0009581" - ], - [ - "gene_synonym", - "mmcD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52045" - ], - [ - "gene_synonym", - "scpB" - ], - [ - "gene_synonym", - "ECK2915" - ] - ], - "dna_sequence": "ATGTCTTATCAGTATGTTAACGTTGTCACTATCAACAAAGTGGCGGTCATTGAGTTTAACTATGGCCGAAAACTTAATGCCTTAAGTAAAGTCTTTATTGATGATCTTATGCAGGCGTTAAGCGATCTCAACCGGCCGGAAATTCGCTGTATCATTTTGCGCGCACCGAGTGGATCCAAAGTCTTCTCCGCAGGTCACGATATTCACGAACTGCCGTCTGGCGGTCGCGATCCGCTCTCCTATGATGATCCATTGCGTCAAATCACCCGCATGATCCAAAAATTCCCGAAACCGATCATTTCGATGGTGGAAGGTAGTGTTTGGGGTGGCGCATTTGAAATGATCATGAGTTCCGATCTGATCATCGCCGCCAGTACCTCAACCTTCTCAATGACGCCTGTAAACCTCGGCGTCCCGTATAACCTGGTCGGCATTCACAACCTGACCCGCGACGCGGGCTTCCACATTGTCAAAGAGCTGATTTTTACCGCTTCGCCAATCACCGCCCAGCGCGCGCTGGCTGTCGGCATCCTCAACCATGTTGTGGAAGTGGAAGAACTGGAAGATTTCACCTTACAAATGGCGCACCACATCTCTGAGAAAGCGCCGTTAGCCATTGCCGTTATCAAAGAAGAGCTGCGTGTACTGGGCGAAGCACACACCATGAACTCCGATGAATTTGAACGTATTCAGGGGATGCGCCGCGCGGTGTATGACAGCGAAGATTACCAGGAAGGGATGAACGCTTTCCTCGAAAAACGTAAACCTAATTTCGTTGGTCATTAA", - "dna_sequence_length": 786, - "functions": [ - "methylmalonyl-CoA decarboxylase, biotin-independent" - ], - "id": "CDS_2876", - "location": [ - [ - "NC_000913", - 3063993, - "+", - 786 - ] - ], - "md5": "1a5e2cdf5e3254b25da96ffd04a9af5e", - "parent_gene": "", - "protein_md5": "0e95d9058728eda4dbe930caf65005d8", - "protein_translation": "MSYQYVNVVTINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNFVGH", - "protein_translation_length": 261, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2887" - ], - [ - "gene_synonym", - "EcoGene:EG12973" - ], - [ - "gene_synonym", - "ECK2916" - ], - [ - "gene_synonym", - "ygfH" - ], - [ - "gene_synonym", - "b2920" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52043" - ], - [ - "gene_synonym", - "ASAP:ABE-0009583" - ], - [ - "gene_synonym", - "GI:16130821" - ], - [ - "gene_synonym", - "NP_417395.1" - ], - [ - "gene_synonym", - "GeneID:947402" - ], - [ - "gene_synonym", - "scpC" - ] - ], - "dna_sequence": "ATGGAAACTCAGTGGACAAGGATGACCGCCAATGAAGCGGCAGAAATTATCCAGCATAACGACATGGTGGCATTTAGCGGCTTTACCCCGGCGGGTTCGCCGAAAGCCCTACCCACCGCGATTGCCCGCAGAGCTAACGAACAGCATGAGGCCAAAAAGCCGTATCAAATTCGCCTTCTGACGGGTGCGTCAATCAGCGCCGCCGCTGACGATGTACTTTCTGACGCCGATGCTGTTTCCTGGCGTGCGCCATATCAAACATCGTCCGGTTTACGTAAAAAGATCAATCAGGGCGCGGTGAGTTTCGTTGACCTGCATTTGAGCGAAGTGGCGCAAATGGTCAATTACGGTTTCTTCGGCGACATTGATGTTGCCGTCATTGAAGCATCGGCACTGGCACCGGATGGTCGAGTCTGGTTAACCAGCGGGATCGGTAATGCGCCGACCTGGCTGCTGCGGGCGAAGAAAGTGATCATTGAACTCAATCACTATCACGATCCGCGCGTTGCAGAACTGGCGGATATTGTGATTCCTGGCGCGCCACCGCGGCGCAATAGCGTGTCGATCTTCCATGCAATGGATCGCGTCGGTACCCGCTATGTGCAAATCGATCCGAAAAAGATTGTCGCCGTCGTGGAAACCAACTTGCCCGACGCCGGTAATATGCTGGATAAGCAAAATCCCATGTGCCAGCAGATTGCCGATAACGTGGTCACGTTCTTATTGCAGGAAATGGCGCATGGGCGTATTCCGCCGGAATTTCTGCCGCTGCAAAGTGGCGTGGGCAATATCAATAATGCGGTAATGGCGCGTCTGGGGGAAAACCCGGTAATTCCTCCGTTTATGATGTATTCGGAAGTGCTACAGGAATCGGTGGTGCATTTACTGGAAACCGGCAAAATCAGCGGGGCCAGCGCCTCCAGCCTGACAATCTCGGCCGATTCCCTGCGCAAGATTTACGACAATATGGATTACTTTGCCAGCCGCATTGTGTTGCGTCCGCAGGAGATTTCCAATAACCCGGAAATCATCCGTCGTCTGGGCGTCATCGCTCTGAACGTCGGCCTGGAGTTTGATATTTACGGGCATGCCAACTCAACACACGTAGCCGGGGTCGATCTGATGAACGGCATCGGCGGCAGCGGTGATTTTGAACGCAACGCGTATCTGTCGATCTTTATGGCCCCGTCGATTGCTAAAGAAGGCAAGATCTCAACCGTCGTGCCAATGTGCAGCCATGTTGATCACAGCGAACACAGCGTCAAAGTGATCATCACCGAACAAGGGATCGCCGATCTGCGCGGTCTTTCCCCGCTTCAACGCGCCCGCACTATCATTGATAATTGTGCACATCCTATGTATCGGGATTATCTGCATCGCTATCTGGAAAATGCGCCTGGCGGACATATTCACCACGATCTTAGCCACGTCTTCGACTTACACCGTAATTTAATTGCAACCGGCTCGATGCTGGGTTAA", - "dna_sequence_length": 1479, - "functions": [ - "propionyl-CoA:succinate CoA transferase" - ], - "id": "CDS_2877", - "location": [ - [ - "NC_000913", - 3064802, - "+", - 1479 - ] - ], - "md5": "d68d980a58fab9264c5eb6ef1d713e6b", - "parent_gene": "", - "protein_md5": "cc7523a7f047592be94e1210abeed74e", - "protein_translation": "METQWTRMTANEAAEIIQHNDMVAFSGFTPAGSPKALPTAIARRANEQHEAKKPYQIRLLTGASISAAADDVLSDADAVSWRAPYQTSSGLRKKINQGAVSFVDLHLSEVAQMVNYGFFGDIDVAVIEASALAPDGRVWLTSGIGNAPTWLLRAKKVIIELNHYHDPRVAELADIVIPGAPPRRNSVSIFHAMDRVGTRYVQIDPKKIVAVVETNLPDAGNMLDKQNPMCQQIADNVVTFLLQEMAHGRIPPEFLPLQSGVGNINNAVMARLGENPVIPPFMMYSEVLQESVVHLLETGKISGASASSLTISADSLRKIYDNMDYFASRIVLRPQEISNNPEIIRRLGVIALNVGLEFDIYGHANSTHVAGVDLMNGIGGSGDFERNAYLSIFMAPSIAKEGKISTVVPMCSHVDHSEHSVKVIITEQGIADLRGLSPLQRARTIIDNCAHPMYRDYLHRYLENAPGGHIHHDLSHVFDLHRNLIATGSMLG", - "protein_translation_length": 492, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12974" - ], - [ - "gene_synonym", - "b2921" - ], - [ - "gene_synonym", - "ECK2917" - ], - [ - "gene_synonym", - "ygfI" - ], - [ - "gene_synonym", - "GeneID:947401" - ], - [ - "gene_synonym", - "ASAP:ABE-0009585" - ], - [ - "gene_synonym", - "GI:90111513" - ], - [ - "gene_synonym", - "NP_417396.4" - ], - [ - "gene_synonym", - "JW5476" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52044" - ] - ], - "dna_sequence": "ATGGACATTTTTATTTCGAAAAAGATGCGCAATTTCATTTTATTAGCGCAAACCAATAATATTGCCCGGGCGGCAGAAAAAATCCATATGACGGCTTCGCCATTTGGTAAAAGCATTGCCGCGCTGGAAGAACAAATTGGCTATACGCTATTTACCCGCAAAGATAATAATATCAGCCTCAATAAAGCCGGACAGGAACTGTATCAAAAACTGTTCCCGGTTTATCAACGGCTTTCTGCGATTGATAATGAAATCCATAACTCAGGGCGTCGTTCACGAGAAATTGTGATTGGCATAGATAATACTTATCCGACAATTATTTTCGATCAGTTGATTAGTCTCGGAGATAAGTATGAAGGCGTGACCGCCCAGCCAGTTGAGTTCAGCGAAAATGGCGTTATCGATAATCTTTTTGACCGCCAGTTAGATTTTATTATCTCCCCACAGCATGTATCTGCACGAGTTCAGGAACTGGAAAACCTGACTATCAGTGAACTACCACCGCTGCGATTAGGCTTTCTCGTTTCTCGCCGTTATGAAGAGCGACAAGAGCAAGAGCTGCTTCAGGAGCTGCCCTGGCTACAAATGCGCTTTCAGAACCGGGCCAACTTCGAAGCAATGATTGATGCGAATATGCGACCTTGTGGGATCAATCCAACCATTATTTATCGTCCCTACAGTTTTATGGCCAAAATCAGCGCCGTGGAGCGCGGACATTTTCTGACGGTGATCCCGCATTTTGCCTGGCGACTGGTGAATCCGGCAACGCTGAAATATTTTGATGCACCGCACAGGCCGATGTATATGCAGGAATATCTTTATTCAATCAGAAATCATCGTTATACCGCCACGATGCTTCAGCATATTGCTGAAGATCGTGACGGGACGAGTCATTAA", - "dna_sequence_length": 897, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_2878", - "location": [ - [ - "NC_000913", - 3067173, - "-", - 897 - ] - ], - "md5": "33613cb70284e4f5cc424e6aac10de25", - "parent_gene": "", - "protein_md5": "bb1cfad3d3e7451672c6ce09a6c4bbde", - "protein_translation": "MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH", - "protein_translation_length": 298, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2922" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADS6" - ], - [ - "gene_synonym", - "yggE" - ], - [ - "gene_synonym", - "NP_417397.1" - ], - [ - "gene_synonym", - "JW2889" - ], - [ - "gene_synonym", - "ECK2918" - ], - [ - "gene_synonym", - "EcoGene:EG11244" - ], - [ - "gene_synonym", - "GI:16130823" - ], - [ - "gene_synonym", - "ASAP:ABE-0009588" - ], - [ - "gene_synonym", - "GeneID:947398" - ] - ], - "dna_sequence": "GTGAAGTTCAAAGTTATCGCCCTGGCGGCATTAATGGGTATTAGCGGGATGGCAGCGCAGGCTAACGAATTGCCGGATGGACCGCATATTGTCACCTCCGGTACGGCAAGCGTGGATGCGGTGCCAGACATTGCCACTCTTGCGATTGAAGTTAACGTGGCCGCGAAGGATGCCGCTACTGCCAAGAAACAGGCAGATGAGCGCGTCGCACAATACATTTCCTTCCTTGAACTCAATCAGATCGCGAAAAAAGATATCAGCTCAGCGAACTTACGCACCCAGCCAGATTATGATTATCAGGATGGTAAAAGTATCCTTAAAGGCTACCGCGCTGTGAGAACGGTGGAAGTCACGCTCCGTCAGTTAGACAAACTGAATTCCTTGCTGGATGGCGCGCTGAAGGCGGGTCTTAACGAAATTCGTTCTGTGTCGCTGGGCGTGGCGCAGCCGGATGCCTATAAAGACAAAGCGCGTAAGGCAGCGATTGATAACGCGATTCATCAGGCGCAGGAACTGGCGAACGGCTTTCATCGTAAACTGGGGCCGGTATATAGCGTGCGCTACCATGTTTCCAACTATCAGCCCAGCCCAATGGTGCGGATGATGAAAGCCGATGCCGCGCCGGTGTCCGCCCAGGAAACTTACGAGCAGGCCGCTATTCAGTTTGATGATCAGGTCGATGTGGTCTTCCAGTTAGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAA", - "dna_sequence_length": 741, - "functions": [ - "oxidative stress defense protein" - ], - "id": "CDS_2879", - "location": [ - [ - "NC_000913", - 3068080, - "-", - 741 - ] - ], - "md5": "ecb9fd407a8cf76448bb238b251d6693", - "parent_gene": "", - "protein_md5": "5add01d1931967e905e1a7da984ac384", - "protein_translation": "MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDIATLAIEVNVAAKDAATAKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDGKSILKGYRAVRTVEVTLRQLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKAAIDNAIHQAQELANGFHRKLGPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQAAIQFDDQVDVVFQLEPVDQQPAKTPAAQ", - "protein_translation_length": 246, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2923" - ], - [ - "gene_synonym", - "GeneID:947418" - ], - [ - "gene_synonym", - "JW2890" - ], - [ - "gene_synonym", - "ECK2919" - ], - [ - "gene_synonym", - "yggA" - ], - [ - "gene_synonym", - "EcoGene:EG11159" - ], - [ - "gene_synonym", - "GI:16130824" - ], - [ - "gene_synonym", - "ASAP:ABE-0009591" - ], - [ - "gene_synonym", - "argO" - ], - [ - "gene_synonym", - "NP_417398.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11667" - ] - ], - "dna_sequence": "GTGTTTTCTTATTACTTTCAAGGTCTTGCACTTGGGGCGGCTATGATCCTACCGCTCGGTCCACAAAATGCTTTTGTGATGAATCAGGGCATACGTCGTCAGTACCACATTATGATTGCCTTACTTTGTGCTATCAGCGATTTGGTCCTGATTTGCGCCGGGATTTTTGGTGGCAGCGCGTTATTGATGCAGTCGCCGTGGTTGCTGGCGCTGGTCACCTGGGGCGGCGTAGCCTTCTTGCTGTGGTATGGTTTTGGCGCTTTTAAAACAGCAATGAGCAGTAATATTGAGTTAGCCAGCGCCGAAGTCATGAAGCAAGGCAGATGGAAAATTATCGCCACCATGTTGGCAGTGACCTGGCTGAATCCGCATGTTTACCTGGATACTTTTGTTGTACTGGGCAGCCTTGGCGGGCAACTTGATGTGGAACCAAAACGCTGGTTTGCACTCGGGACAATTAGCGCCTCTTTCCTGTGGTTCTTTGGTCTGGCTCTTCTCGCAGCCTGGCTGGCACCGCGTCTGCGCACGGCAAAAGCACAGCGCATTATCAATCTGGTTGTGGGATGTGTTATGTGGTTTATTGCCTTGCAGCTGGCGAGAGACGGTATTGCTCATGCACAAGCCTTGTTCAGTTAG", - "dna_sequence_length": 636, - "functions": [ - "arginine transporter" - ], - "id": "CDS_2880", - "location": [ - [ - "NC_000913", - 3068808, - "-", - 636 - ] - ], - "md5": "b39f30b1aec765edd5e336525eb16e11", - "parent_gene": "", - "protein_md5": "1f9a8356d1f4271503b6a7b636a7aec2", - "protein_translation": "MFSYYFQGLALGAAMILPLGPQNAFVMNQGIRRQYHIMIALLCAISDLVLICAGIFGGSALLMQSPWLLALVTWGGVAFLLWYGFGAFKTAMSSNIELASAEVMKQGRWKIIATMLAVTWLNPHVYLDTFVVLGSLGGQLDVEPKRWFALGTISASFLWFFGLALLAAWLAPRLRTAKAQRIINLVVGCVMWFIALQLARDGIAHAQALFS", - "protein_translation_length": 211, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2924" - ], - [ - "gene_synonym", - "JW2891" - ], - [ - "gene_synonym", - "GeneID:947416" - ], - [ - "gene_synonym", - "EcoGene:EG11160" - ], - [ - "gene_synonym", - "mscS" - ], - [ - "gene_synonym", - "ECK2920" - ], - [ - "gene_synonym", - "yggB" - ], - [ - "gene_synonym", - "ASAP:ABE-0009595" - ], - [ - "gene_synonym", - "GI:16130825" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C0S1" - ], - [ - "gene_synonym", - "NP_417399.1" - ] - ], - "dna_sequence": "ATGGAAGATTTGAATGTTGTCGATAGCATAAACGGCGCGGGAAGCTGGCTGGTAGCTAACCAGGCGCTGCTGCTAAGTTATGCAGTAAACATCGTGGCGGCACTCGCGATCATCATCGTTGGTTTGATTATCGCGCGGATGATTTCCAACGCGGTGAATCGCCTGATGATCTCCCGTAAAATCGATGCCACTGTTGCTGATTTTCTTTCTGCATTAGTCCGTTACGGTATTATCGCCTTTACGCTAATCGCTGCACTGGGACGCGTGGGTGTACAAACCGCGTCAGTCATTGCTGTACTCGGTGCCGCAGGCTTAGCTGTTGGTCTGGCTTTGCAGGGGTCACTGTCTAACCTGGCCGCTGGCGTGTTACTTGTCATGTTCCGCCCGTTCCGTGCCGGAGAATATGTTGACCTGGGCGGCGTAGCCGGTACTGTGCTGAGTGTGCAGATTTTCTCCACCACCATGCGTACTGCAGACGGTAAAATTATCGTTATTCCGAACGGTAAAATTATTGCCGGAAATATTATTAACTTCTCCCGCGAGCCAGTTCGCCGTAACGAATTTATTATTGGCGTGGCGTATGATTCCGATATCGATCAGGTTAAGCAGATCCTGACCAATATTATCCAGTCTGAAGATCGCATTTTGAAAGATCGCGAAATGACTGTGCGCCTGAACGAACTTGGTGCATCGTCGATTAATTTCGTGGTCCGCGTCTGGAGCAACAGCGGCGATCTGCAAAACGTGTACTGGGATGTGCTGGAGCGTATTAAACGTGAATTTGATGCCGCCGGTATCAGCTTCCCGTACCCGCAAATGGATGTGAACTTTAAGCGGGTGAAAGAAGACAAAGCTGCGTAA", - "dna_sequence_length": 861, - "functions": [ - "mechanosensitive channel protein, small conductance" - ], - "id": "CDS_2881", - "location": [ - [ - "NC_000913", - 3069807, - "-", - 861 - ] - ], - "md5": "57101d9253a31a16e871dcdb3b8e52b4", - "parent_gene": "", - "protein_md5": "3f5066a57f5874d23b5e7683e1774555", - "protein_translation": "MEDLNVVDSINGAGSWLVANQALLLSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNFKRVKEDKAA", - "protein_translation_length": 286, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "fda" - ], - [ - "gene_synonym", - "NP_417400.1" - ], - [ - "gene_synonym", - "JW2892" - ], - [ - "gene_synonym", - "b2925" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB71" - ], - [ - "gene_synonym", - "ald" - ], - [ - "gene_synonym", - "GeneID:947415" - ], - [ - "gene_synonym", - "ECK2921" - ], - [ - "gene_synonym", - "GI:16130826" - ], - [ - "gene_synonym", - "fba" - ], - [ - "gene_synonym", - "EcoGene:EG10282" - ], - [ - "gene_synonym", - "fbaA" - ], - [ - "gene_synonym", - "ASAP:ABE-0009600" - ] - ], - "dna_sequence": "ATGTCTAAGATTTTTGATTTCGTAAAACCTGGCGTAATCACTGGTGATGACGTACAGAAAGTTTTCCAGGTAGCAAAAGAAAACAACTTCGCACTGCCAGCAGTAAACTGCGTCGGTACTGACTCCATCAACGCCGTACTGGAAACCGCTGCTAAAGTTAAAGCGCCGGTTATCGTTCAGTTCTCCAACGGTGGTGCTTCCTTTATCGCTGGTAAAGGCGTGAAATCTGACGTTCCGCAGGGTGCTGCTATCCTGGGCGCGATCTCTGGTGCGCATCACGTTCACCAGATGGCTGAACATTATGGTGTTCCGGTTATCCTGCACACTGACCACTGCGCGAAGAAACTGCTGCCGTGGATCGACGGTCTGTTGGACGCGGGTGAAAAACACTTCGCAGCTACCGGTAAGCCGCTGTTCTCTTCTCACATGATCGACCTGTCTGAAGAATCTCTGCAAGAGAACATCGAAATCTGCTCTAAATACCTGGAGCGCATGTCCAAAATCGGCATGACTCTGGAAATCGAACTGGGTTGCACCGGTGGTGAAGAAGACGGCGTGGACAACAGCCACATGGACGCTTCTGCACTGTACACCCAGCCGGAAGACGTTGATTACGCATACACCGAACTGAGCAAAATCAGCCCGCGTTTCACCATCGCAGCGTCCTTCGGTAACGTACACGGTGTTTACAAGCCGGGTAACGTGGTTCTGACTCCGACCATCCTGCGTGATTCTCAGGAATATGTTTCCAAGAAACACAACCTGCCGCACAACAGCCTGAACTTCGTATTCCACGGTGGTTCCGGTTCTACTGCTCAGGAAATCAAAGACTCCGTAAGCTACGGCGTAGTAAAAATGAACATCGATACCGATACCCAATGGGCAACCTGGGAAGGCGTTCTGAACTACTACAAAGCGAACGAAGCTTATCTGCAGGGTCAGCTGGGTAACCCGAAAGGCGAAGATCAGCCGAACAAGAAATACTACGATCCGCGCGTATGGCTGCGTGCCGGTCAGACTTCGATGATCGCTCGTCTGGAGAAAGCATTCCAGGAACTGAACGCGATCGACGTTCTGTAA", 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"gene_synonym", - "ECK2922" - ], - [ - "gene_synonym", - "GI:16130827" - ], - [ - "gene_synonym", - "EcoGene:EG10703" - ], - [ - "gene_synonym", - "ASAP:ABE-0009605" - ], - [ - "gene_synonym", - "b2926" - ] - ], - "dna_sequence": "ATGTCTGTAATTAAGATGACCGATCTGGATCTTGCTGGGAAACGTGTATTTATCCGTGCGGATCTGAACGTACCAGTAAAAGACGGGAAAGTAACCAGCGACGCGCGTATCCGTGCTTCTCTGCCGACCATCGAACTGGCCCTGAAACAAGGCGCAAAAGTGATGGTAACTTCCCACCTGGGTCGTCCTACCGAAGGCGAGTACAACGAAGAATTCTCTCTGCTGCCGGTTGTTAACTACCTGAAAGACAAACTGTCTAACCCGGTTCGTCTGGTTAAAGATTACCTCGACGGCGTTGACGTTGCTGAAGGTGAACTGGTTGTTCTGGAAAACGTTCGCTTCAACAAAGGCGAGAAGAAAGACGACGAAACCCTGTCCAAAAAATACGCTGCACTGTGTGACGTGTTCGTAATGGACGCATTCGGTACTGCTCACCGCGCGCAGGCTTCTACTCACGGTATCGGTAAATTCGCTGACGTTGCGTGCGCAGGCCCGCTGCTGGCAGCTGAACTGGACGCGCTGGGTAAAGCACTGAAAGAACCTGCTCGCCCGATGGTGGCTATCGTTGGTGGTTCTAAAGTATCTACCAAACTGACCGTTCTGGACTCCCTGTCTAAAATCGCTGACCAGCTGATTGTTGGTGGTGGTATCGCTAACACCTTTATCGCGGCACAAGGCCACGATGTGGGTAAATCCCTGTACGAAGCTGACCTGGTTGACGAAGCTAAACGTCTGCTGACCACCTGCAACATCCCGGTTCCGTCTGATGTTCGCGTAGCAACCGAGTTCTCTGAAACTGCACCGGCTACCCTGAAATCTGTTAACGATGTGAAAGCTGACGAGCAGATCCTGGATATCGGTGATGCTTCCGCTCAGGAACTGGCTGAAATCCTGAAGAATGCGAAAACCATTCTGTGGAACGGTCCGGTTGGCGTGTTCGAATTCCCGAACTTCCGCAAAGGTACTGAAATCGTGGCTAACGCTATCGCAGACAGCGAAGCGTTCTCCATCGCTGGCGGCGGCGACACTCTGGCAGCAATCGACCTGTTCGGCATTGCTGACAAAATCTCCTACATCTCCACTGGCGGCGGCGCATTCCTCGAATTCGTGGAAGGTAAAGTACTGCCTGCAGTAGCGATGCTCGAAGAGCGCGCTAAGAAGTAA", 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"gene_synonym", - "GeneID:947413" - ], - [ - "gene_synonym", - "EcoGene:EG10368" - ], - [ - "gene_synonym", - "NP_417402.1" - ], - [ - "gene_synonym", - "epd" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9B6" - ], - [ - "gene_synonym", - "GI:16130828" - ] - ], - "dna_sequence": "ATGACCGTACGCGTAGCGATAAATGGCTTCGGTCGCATCGGGCGTAATGTGGTTCGTGCTTTGTATGAATCCGGACGCCGGGCGGAAATTACCGTGGTGGCAATCAACGAACTGGCGGATGCTGCGGGCATGGCGCATTTGTTGAAATATGACACCAGCCATGGCCGTTTTGCATGGGAAGTACGACAGGAACGCGATCAACTTTTTGTTGGTGATGACGCCATCCGCGTATTGCATGAACGTTCACTGCAATCGCTCCCCTGGCGTGAACTTGGCGTTGATGTAGTCCTCGACTGCACCGGCGTATATGGCTCCCGCGAGCATGGCGAAGCGCATATTGCCGCCGGGGCCAAAAAAGTGCTCTTTTCACATCCTGGCAGTAACGATCTCGACGCGACCGTTGTTTACGGCGTCAATCAGGATCAACTTCGTGCGGAACACCGCATCGTTTCTAACGCTTCCTGTACCACGAATTGCATAATTCCCGTCATCAAATTGTTAGATGATGCGTACGGTATTGAGTCCGGCACTGTGACCACAATTCACTCCGCCATGCACGATCAACAGGTTATTGATGCATACCATCCTGACCTGCGTCGCACCCGGGCAGCCAGCCAGTCGATCATTCCGGTCGATACTAAACTGGCCGCCGGTATCACACGATTTTTTCCGCAATTTAACGATCGCTTTGAAGCGATTGCGGTACGTGTGCCAACCATAAATGTGACGGCAATCGATTTAAGCGTGACGGTGAAGAAACCTGTAAAAGCCAATGAAGTCAACCTGTTGCTGCAAAAAGCAGCACAAGGTGCATTTCATGGTATAGTTGACTATACGGAATTGCCGTTGGTCTCTGTAGATTTTAACCACGATCCGCACAGTGCCATTGTCGATGGCACCCAAACCCGGGTCAGTGGCGCACACCTGATCAAAACGTTGGTCTGGTGCGATAACGAATGGGGCTTTGCTAACCGAATGCTCGACACGACGTTAGCTATGGCTACTGTTGCTTTCAGGTAA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P11664" - ], - [ - "gene_synonym", - "EcoGene:EG11161" - ], - [ - "gene_synonym", - "ASAP:ABE-0009610" - ], - [ - "gene_synonym", - "GI:16130829" - ] - ], - "dna_sequence": "GTGAAAATTGAATTAACGGTGAATGGGCTGAAGATACAGGCACAGTACCAGAACGAAGAGATTGAAAATGTACATAAACCGTTGCTGCACATGTTGGCGGCCTTACAGACGGTAAATCCGCAGCGGCGTACGGTGGTTTTTCTTTGCGCTCCGCCGGGGACGGGTAAATCAACCCTAACCACCTTCTGGGAATATCTCGCGCAACAAGACCCGGAACTGCCCGCTATTCAGACGCTCCCGATGGATGGTTTTCACCATTACAATAGCTGGCTGGATGCGCATCAATTGCGCCCCTTCAAAGGCGCACCAGAGACATTTGACGTTGCGAAACTGACGGAAAATCTGCGCCAGGTCGTGGAAGGGGATTGTACGTGGCCGCAGTACGATCGACAAAAGCATGATCCTGTTGAAGATGCGTTGCACGTTACCGCACCACTCGTCATCGTCGAAGGAAACTGGTTGTTACTGGATGATGAAAAGTGGCTGGAGTTGGCATCTTTCTGCGATTTTTCTATTTTTATTCATGCACCTGCTCAAATTCTGCGGGAGCGCTTGATTAGTCGTAAAATTGCGGGAGGATTAACGCGGCAAGTAGCCGAAGCATTTTATGCCCGCACCGATGGCCCCAATGTCGAGCGTGTGCTGATGAATAGCCGTCAGGCCAATCTGATAGTAGAGATGACTGAAGAAGGCCGGTATCACTTCACAAGCTGA", - "dna_sequence_length": 714, - "functions": [ - "putative PanK family P-loop kinase" - ], - "id": "CDS_2885", - "location": [ - [ - "NC_000913", - 3074689, - "-", - 714 - ] - ], - "md5": "3d5a2ec6b03a1bcc0689a15c9f772abb", - "parent_gene": "", - "protein_md5": "26bfbf83a063cddf74905f0cb1f3b3fa", - "protein_translation": "MKIELTVNGLKIQAQYQNEEIENVHKPLLHMLAALQTVNPQRRTVVFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGAPETFDVAKLTENLRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEKWLELASFCDFSIFIHAPAQILRERLISRKIAGGLTRQVAEAFYARTDGPNVERVLMNSRQANLIVEMTEEGRYHFTS", - "protein_translation_length": 237, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2896" - ], - [ - "gene_synonym", - "NP_417404.1" - ], - [ - "gene_synonym", - "ECK2925" - ], - [ - "gene_synonym", - "yggD" - ], - [ - "gene_synonym", - "b2929" - ], - [ - "gene_synonym", - "GeneID:946861" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11663" - ], - [ - "gene_synonym", - "GI:16130830" - ], - [ - "gene_synonym", - "ASAP:ABE-0009612" - ], - [ - "gene_synonym", - "EcoGene:EG11162" - ] - ], - "dna_sequence": "ATGGCGACGCTGACAGAAGATGATGTGCTTGAGCAACTGGATGCACAGGACAATTTATTTTCATTTATGAAAACTGCGCATACCATTTTGCTCCAGGGGATACGCCAGTTTCTGCCGTCGCTGTTTGTCGATAACGATGAAGAGATCGTGGAATATGCAGTGAAGCCGTTACTCGCCCAAAGCGGCCCGCTTGACGATATTGATGTTGCACTGCGTTTGATTTATGCGTTGGGGAAAATGGATAAATGGTTGTACGCCGATATCACGCATTTTTCCCAGTTCTGGCATTACCTGAACGAACAGGATGAAACGCCCGGATTTGCCGATGACATGACCTGGGATTTTATCAGCAACGTCAATAGCATAACCCGCAATGCGATGCTCTATGACGCGTTAAAAGCGATGAAGTTCGCTGATTTCTCCGTCTGGTCAGAGGCGCGTTTTAGCGGAATGGTCAAAACGGCGCTGACGCTGGCAGTAACGACCACCTTAAAGGAATTAACGCCGTGA", - "dna_sequence_length": 510, - "functions": [ - "MtlR family putative transcriptional repressor" - ], - "id": "CDS_2886", - "location": [ - [ - "NC_000913", - 3075195, - "-", - 510 - ] - ], - "md5": "9fa092b1c22cf4dce52c2ba678b1e0e6", - "parent_gene": "", - "protein_md5": "51e2fa066fc9a29add8a19230669a6b2", - "protein_translation": "MATLTEDDVLEQLDAQDNLFSFMKTAHTILLQGIRQFLPSLFVDNDEEIVEYAVKPLLAQSGPLDDIDVALRLIYALGKMDKWLYADITHFSQFWHYLNEQDETPGFADDMTWDFISNVNSITRNAMLYDALKAMKFADFSVWSEARFSGMVKTALTLAVTTTLKELTP", - "protein_translation_length": 169, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2930" - ], - [ - "gene_synonym", - "yggF" - ], - [ - "gene_synonym", - "yggK" - ], - [ - "gene_synonym", - "JW2897" - ], - [ - "gene_synonym", - "ECK2926" - ], - [ - "gene_synonym", - "GeneID:947410" - ], - [ - "gene_synonym", - "GI:16130831" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21437" - ], - [ - "gene_synonym", - "EcoGene:EG11245" - ], - [ - "gene_synonym", - "NP_417405.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009615" - ] - ], - "dna_sequence": "ATGATGTCCCTGGCGTGGCCATTATTTCGCGTTACGGAACAGGCAGCGTTGGCTGCCTGGCCGCAAACCGGATGTGGCGACAAAAATAAAATTGATGGCCTGGCGGTCACCGCGATGCGCCAGGCATTAAACGACGTCGCTTTTCGTGGACGAGTGGTTATCGGCGAAGGAGAAATTGACCATGCGCCGATGCTGTGGATTGGCGAAGAGGTGGGCAAAGGCGATGGGCCAGAAGTCGATATCGCGGTTGATCCCATTGAAGGCACGCGGATGGTGGCGATGGGGCAGAGCAATGCGCTGGCGGTCATGGCTTTCGCCCCTCGAGATAGCCTGTTACATGCGCCCGATATGTATATGAAAAAGCTGGTTGTTAATCGGCTGGCGGCGGGCGCGATTGATCTGTCTTTGCCTCTGACGGACAACCTGCGCAACGTGGCGAAAGCGTTAGGCAAACCGCTGGATAAGCTGCGCATGGTTACGCTGGATAAACCGCGCCTGAGTGCCGCGATTGAGGAAGCAACACAGCTGGGCGTGAAGGTTTTTGCCCTGCCGGATGGCGATGTCGCCGCCAGCGTGCTGACCTGCTGGCAGGATAATCCTTACGATGTGATGTACACCATCGGCGGTGCGCCAGAAGGCGTGATTTCTGCCTGTGCCGTTAAAGCATTAGGCGGGGATATGCAGGCCGAGCTGATTGACTTTTGCCAGGCTAAAGGGGATTACACGGAAAATCGGCAGATTGCAGAGCAGGAGCGCAAGCGTTGCAAGGCAATGGGCGTTGACGTTAACCGTGTGTACTCGCTCGATGAACTGGTGAGGGGGAACGATATCCTCTTTAGCGCTACGGGCGTGACGGGCGGTGAGCTGGTGAACGGTATCCAACAGACGGCGAATGGGGTGCGGACGCAGACATTACTGATCGGCGGCGCGGACCAAACGTGTAATATAATAGACTCCCTGCATTGA", - "dna_sequence_length": 966, - "functions": [ - "fructose 1,6 bisphosphatase isozyme" - ], - "id": "CDS_2887", - "location": [ - [ - "NC_000913", - 3076182, - "-", - 966 - ] - ], - "md5": "280e03f9553b61fe3379bc0cc1d6f20a", - "parent_gene": "", - "protein_md5": "b3e81f00d7d1e583ef27fcbc0816d6a1", - "protein_translation": "MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALNDVAFRGRVVIGEGEIDHAPMLWIGEEVGKGDGPEVDIAVDPIEGTRMVAMGQSNALAVMAFAPRDSLLHAPDMYMKKLVVNRLAAGAIDLSLPLTDNLRNVAKALGKPLDKLRMVTLDKPRLSAAIEEATQLGVKVFALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISACAVKALGGDMQAELIDFCQAKGDYTENRQIAEQERKRCKAMGVDVNRVYSLDELVRGNDILFSATGVTGGELVNGIQQTANGVRTQTLLIGGADQTCNIIDSLH", - "protein_translation_length": 321, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4465" - ], - [ - "gene_synonym", - "EcoGene:EG12976" - ], - [ - "gene_synonym", - "GeneID:2847686" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52048" - ], - [ - "gene_synonym", - "ECK2927" - ], - [ - "gene_synonym", - "GI:49176285" - ], - [ - "gene_synonym", - "YP_026187.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0174095" - ], - [ - "gene_synonym", - "JW5477" - ], - [ - "gene_synonym", - "yggP" - ] - ], - "dna_sequence": "ATGAAAACCAAAGTTGCTGCTATTTATGGCAAGCGGGATGTCCGTCTGCGCGTATTTGAACTGCCAGAAATTACCGATAATGAATTACTGGTGAGTGTAATTTCTGACAGCGTCTGTTTATCGACCTGGAAAGCGGCGTTACTCGGTAGTGAACATAAACGCGTACCCGACGATTTAGAAAATCATCCGGTCATTACCGGGCATGAATGTGCCGGGGTTATTGTCGAAGTGGGTAAAAATCTCACTGGCAAATATAAAAAAGGCCAGCGTTTTGTATTGCAACCGGCGATGGGGTTACCAAGCGGATATTCAGCGGGCTACAGCTACGAATATTTTGGCGGCAATGCCACTTATATGATTATTCCCGAAATCGCCATTAATTTGGGCTGCGTATTACCGTATCACGGCTCTTATTTTGCTGCGGCGTCGCTGGCAGAGCCTATGTGCTGCATTATTGGTGCTTATCATGCCAATTATCACACCACGCAATATGTTTATGAGCATCGCATGGGCGTCAAACCTGGCGGCAATATTGCACTGCTGGCGTGTGCAGGTCCGATGGGCATTGGCGCTATCGATTACGCCATTAACGGCGGCATACAACCGTCGCGGGTGGTGGTGGTCGATATCGACGACAAACGTCTGGCGCAGGTACAGAAGCTGCTGCCGGTGGAACTGGCGGCCAGTAAAGGCATTGAGCTGGTGTATGTGAATACCAAAGGGATGAGCGATCCTGTCCAGATGCTGCGGGCGCTGACAGGAGATGCCGGGTTCGATGACATTTTTGTTTATGCGGCGGTGCCTGCTGTCGTTGAGATGGCTGATGAATTACTGGCGGAAGATGGCTGTCTGAACTTCTTTGCCGGGCCGACGGATAAAAACTTCAAAGTGCCGTTTAATTTCTACAACGTCCATTACAACAGCACGCACGTCGTCGGTACATCTGGCGGTTCAACGGACGACATGAAAGAGGCGATTGCCCTTAGCGCCACTGGGCAGTTACAGCCGTCGTTTATGGTGACCCATATCGGTGGCCTGGATGCGGTGCCAGAAACCGTGCTCAATCTGCCGGATATCCCTGGCGGTAAAAAACTCATTTATAACGGCGTGACCATGCCGCTCACTGCCATTGCCGATTTTGCCGAAAAAGGCAAAACCGATCCGCTGTTTAAAGAGTTGGCGCGGCTGGTTGAGGAAACGCACGGCATCTGGAATGAACAGGCCGAGAAATATCTGCTGGCACAATTTGGCGTTGATATCGGGGAGGCCGCGCAATGA", - "dna_sequence_length": 1278, - "functions": [ - "putative Zn-binding dehydrogenase" - ], - "id": "CDS_2888", - "location": [ - [ - "NC_000913", - 3077456, - "-", - 1278 - ] - ], - "md5": "883994c13fcf4322dc06354178939c3f", - "parent_gene": "", - "protein_md5": "e9173a627d8ab274d59a2d0af31af9d0", - "protein_translation": "MKTKVAAIYGKRDVRLRVFELPEITDNELLVSVISDSVCLSTWKAALLGSEHKRVPDDLENHPVITGHECAGVIVEVGKNLTGKYKKGQRFVLQPAMGLPSGYSAGYSYEYFGGNATYMIIPEIAINLGCVLPYHGSYFAAASLAEPMCCIIGAYHANYHTTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQVQKLLPVELAASKGIELVYVNTKGMSDPVQMLRALTGDAGFDDIFVYAAVPAVVEMADELLAEDGCLNFFAGPTDKNFKVPFNFYNVHYNSTHVVGTSGGSTDDMKEAIALSATGQLQPSFMVTHIGGLDAVPETVLNLPDIPGGKKLIYNGVTMPLTAIADFAEKGKTDPLFKELARLVEETHGIWNEQAEKYLLAQFGVDIGEAAQ", - "protein_translation_length": 425, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2933" - ], - [ - "gene_synonym", - "ECK2928" - ], - [ - "gene_synonym", - "GeneID:945256" - ], - [ - "gene_synonym", - "cmtA" - ], - [ - "gene_synonym", - "JW2900" - ], - [ - "gene_synonym", - "GI:16130834" - ], - [ - "gene_synonym", - "NP_417408.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009621" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69826" - ], - [ - "gene_synonym", - "EcoGene:EG11792" - ] - ], - "dna_sequence": "ATGGAAAACAAGTCTGCTCGTGCAAAGGTCCAGGCTTTTGGGGGCTTTTTGACTGCAATGGTCATCCCCAATATTGGTGCTTTTATTGCCTGGGGTTTTATTACTGCGTTATTTATTCCCACCGGTTGGCTGCCTAACGAACATTTCGCCAAAATTGTCGGCCCGATGATTACCTATTTATTGCCCGTGATGATTGGTTCTACAGGTGGTCATCTGGTCGGCGGTAAACGCGGGGCGGTCATGGGCGGAATAGGTACTATTGGTGTGATCGTTGGCGCAGAGATCCCGATGTTCCTTGGCTCAATGATCATGGGGCCGCTCGGTGGGTTGGTCATAAAATATGTCGATAAGGCACTGGAAAAACGCATACCTGCCGGTTTTGAGATGGTTATCAATAACTTCTCATTAGGTATCGCGGGGATGCTCCTTTGTCTGCTGGGTTTTGAAGTTATCGGCCCGGCGGTGTTAATTGCCAATACTTTCGTCAAAGAGTGTATTGAGGCGCTGGTACATGCGGGTTATCTGCCATTGTTGTCAGTCATCAATGAACCGGCGAAAGTGCTTTTCCTCAATAATGCGATCGATCAGGGCGTCTATTATCCGCTGGGAATGCAACAGGCTTCGGTTAACGGTAAATCCATCTTCTTTATGGTGGCCTCTAACCCAGGTCCGGGCCTGGGGCTGCTGCTGGCGTTTACCTTGTTTGGTAAAGGGATGAGTAAACGTTCTGCGCCCGGGGCGATGATTATTCACTTCCTCGGTGGGATCCACGAACTGTATTTCCCGTATGTGCTGATGAAGCCGCTGACCATTATTGCCATGATTGCGGGCGGTATGTCTGGCACCTGGATGTTTAACTTACTGGACGGTGGTCTGGTGGCTGGCCCAAGTCCGGGGTCTATCTTTGCTTACCTGGCACTGACGCCGAAAGGCTCGTTCCTGGCGACAATTGCCGGTGTTACGGTAGGTACCCTGGTGTCCTTTGCTATTACTTCGCTGATACTGAAGATGGAAAAAACGGTGGAAACGGAGAGCGAAGATGAGTTTGCTCAGTCAGCCAATGCGGTTAAGGCGATGAAACAAGAGGGTGCATTCTCGTTAAGCAGGGTTAAGCGTATCGCCTTTGTTTGCGATGCGGGGATGGGCTCCAGTGCGATGGGCGCGACCACCTTCCGTAAACGCCTGGAAAAAGCGGGGCTGGCAATTGAAGTAAAACATTACGCCATAGAAAACGTGCCTGCGGATGCGGATATCGTCGTTACTCATGCCAGTCTGGAAGGGCGCGTGAAACGTGTGACGGATAAACCACTGATATTGATTAATAACTATATTGGCGATCCAAAACTCGACACTTTATTTAATCAATTAACCGCCGAACATAAACACTGA", - "dna_sequence_length": 1389, - "functions": [ - "putative mannitol-specific PTS IIB and IIC components" - ], - "id": "CDS_2889", - "location": [ - [ - "NC_000913", - 3078859, - "-", - 1389 - ] - ], - "md5": "b9150f607ab27172934d3cc9eee0cf2a", - "parent_gene": "", - "protein_md5": "8ce8ec0d6ea47d9d398fe9ac61320dc1", - "protein_translation": "MENKSARAKVQAFGGFLTAMVIPNIGAFIAWGFITALFIPTGWLPNEHFAKIVGPMITYLLPVMIGSTGGHLVGGKRGAVMGGIGTIGVIVGAEIPMFLGSMIMGPLGGLVIKYVDKALEKRIPAGFEMVINNFSLGIAGMLLCLLGFEVIGPAVLIANTFVKECIEALVHAGYLPLLSVINEPAKVLFLNNAIDQGVYYPLGMQQASVNGKSIFFMVASNPGPGLGLLLAFTLFGKGMSKRSAPGAMIIHFLGGIHELYFPYVLMKPLTIIAMIAGGMSGTWMFNLLDGGLVAGPSPGSIFAYLALTPKGSFLATIAGVTVGTLVSFAITSLILKMEKTVETESEDEFAQSANAVKAMKQEGAFSLSRVKRIAFVCDAGMGSSAMGATTFRKRLEKAGLAIEVKHYAIENVPADADIVVTHASLEGRVKRVTDKPLILINNYIGDPKLDTLFNQLTAEHKH", - "protein_translation_length": 462, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945125" - ], - [ - "gene_synonym", - "ECK2929" - ], - [ - "gene_synonym", - "b2934" - ], - [ - "gene_synonym", - "EcoGene:EG11791" - ], - [ - "gene_synonym", - "cmtB" - ], - [ - "gene_synonym", - "GI:16130835" - ], - [ - "gene_synonym", - "JW2901" - ], - [ - "gene_synonym", - "tolM" - ], - [ - "gene_synonym", - "ASAP:ABE-0009623" - ], - [ - "gene_synonym", - "NP_417409.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69824" - ] - ], - "dna_sequence": "ATGCGGCTTAGTGATTATTTTCCAGAATCATCAATCTCAGTTATACATTCAGCAAAAGATTGGCAGGAAGCTATCGATTTCTCGATGGTATCATTGCTGGATAAAAACTATATCAGCGAGAATTACATTCAGGCAATTAAAGATTCCACCATTAACAATGGCCCTTATTATATTCTCGCACCAGGCGTGGCAATGCCTCATGCGCGACCGGAATGTGGGGCGCTTAAAACCGGGATGTCTTTGACATTACTTGAACAAGGTGTTTATTTTCCGGGGAATGACGAACCAATTAAATTACTCATCGGACTCTCTGCTGCCGATGCCGATTCGCACATTGGCGCTATTCAGGCGTTAAGTGAATTACTGTGCGAAGAAGAAATACTCGAACAACTCTTAACAGCATCATCAGAAAAACAATTAGCGGACATTATCAGCCGCGGATAA", - "dna_sequence_length": 444, - "functions": [ - "putative mannitol-specific enzyme IIA component of PTS" - ], - "id": "CDS_2890", - "location": [ - [ - "NC_000913", - 3079330, - "-", - 444 - ] - ], - "md5": "413278807ff6fec5c08db355bddfd37a", - "parent_gene": "", - "protein_md5": "69bb77a7a3d14d6a6f90fb3064cadc4e", - "protein_translation": "MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQAIKDSTINNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGVYFPGNDEPIKLLIGLSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISRG", - "protein_translation_length": 147, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2935" - ], - [ - "gene_synonym", - "EcoGene:EG11427" - ], - [ - "gene_synonym", - "ECK2930" - ], - [ - "gene_synonym", - "GeneID:947420" - ], - [ - "gene_synonym", - "tkt" - ], - [ - "gene_synonym", - "YP_026188.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009625" - ], - [ - "gene_synonym", - "tktA" - ], - [ - "gene_synonym", - "JW5478" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27302" - ], - [ - "gene_synonym", - "GI:49176286" - ] - ], - "dna_sequence": "ATGTCCTCACGTAAAGAGCTTGCCAATGCTATTCGTGCGCTGAGCATGGACGCAGTACAGAAAGCCAAATCCGGTCACCCGGGTGCCCCTATGGGTATGGCTGACATTGCCGAAGTCCTGTGGCGTGATTTCCTGAAACACAACCCGCAGAATCCGTCCTGGGCTGACCGTGACCGCTTCGTGCTGTCCAACGGCCACGGCTCCATGCTGATCTACAGCCTGCTGCACCTCACCGGTTACGATCTGCCGATGGAAGAACTGAAAAACTTCCGTCAGCTGCACTCTAAAACTCCGGGTCACCCGGAAGTGGGTTACACCGCTGGTGTGGAAACCACCACCGGTCCGCTGGGTCAGGGTATTGCCAACGCAGTCGGTATGGCGATTGCAGAAAAAACGCTGGCGGCGCAGTTTAACCGTCCGGGCCACGACATTGTCGACCACTACACCTACGCCTTCATGGGCGACGGCTGCATGATGGAAGGCATCTCCCACGAAGTTTGCTCTCTGGCGGGTACGCTGAAGCTGGGTAAACTGATTGCATTCTACGATGACAACGGTATTTCTATCGATGGTCACGTTGAAGGCTGGTTCACCGACGACACCGCAATGCGTTTCGAAGCTTACGGCTGGCACGTTATTCGCGACATCGACGGTCATGACGCGGCATCTATCAAACGCGCAGTAGAAGAAGCGCGCGCAGTGACTGACAAACCTTCCCTGCTGATGTGCAAAACCATCATCGGTTTCGGTTCCCCGAACAAAGCCGGTACCCACGACTCCCACGGTGCGCCGCTGGGCGACGCTGAAATTGCCCTGACCCGCGAACAACTGGGCTGGAAATATGCGCCGTTCGAAATCCCGTCTGAAATCTATGCTCAGTGGGATGCGAAAGAAGCAGGCCAGGCGAAAGAATCCGCATGGAACGAGAAATTCGCTGCTTACGCGAAAGCTTATCCGCAGGAAGCCGCTGAATTTACCCGCCGTATGAAAGGCGAAATGCCGTCTGACTTCGACGCTAAAGCGAAAGAGTTCATCGCTAAACTGCAGGCTAATCCGGCGAAAATCGCCAGCCGTAAAGCGTCTCAGAATGCTATCGAAGCGTTCGGTCCGCTGTTGCCGGAATTCCTCGGCGGTTCTGCTGACCTGGCGCCGTCTAACCTGACCCTGTGGTCTGGTTCTAAAGCAATCAACGAAGATGCTGCGGGTAACTACATCCACTACGGTGTTCGCGAGTTCGGTATGACCGCGATTGCTAACGGTATCTCCCTGCACGGTGGCTTCCTGCCGTACACCTCCACCTTCCTGATGTTCGTGGAATACGCACGTAACGCCGTACGTATGGCTGCGCTGATGAAACAGCGTCAGGTGATGGTTTACACCCACGACTCCATCGGTCTGGGCGAAGACGGCCCGACTCACCAGCCGGTTGAGCAGGTCGCTTCTCTGCGCGTAACCCCGAACATGTCTACATGGCGTCCGTGTGACCAGGTTGAATCCGCGGTCGCGTGGAAATACGGTGTTGAGCGTCAGGACGGCCCGACCGCACTGATCCTCTCCCGTCAGAACCTGGCGCAGCAGGAACGAACTGAAGAGCAACTGGCAAACATCGCGCGCGGTGGTTATGTGCTGAAAGACTGCGCCGGTCAGCCGGAACTGATTTTCATCGCTACCGGTTCAGAAGTTGAACTGGCTGTTGCTGCCTACGAAAAACTGACTGCCGAAGGCGTGAAAGCGCGCGTGGTGTCCATGCCGTCTACCGACGCATTTGACAAGCAGGATGCTGCTTACCGTGAATCCGTACTGCCGAAAGCGGTTACTGCACGCGTTGCTGTAGAAGCGGGTATTGCTGACTACTGGTACAAGTATGTTGGCCTGAACGGTGCTATCGTCGGTATGACCACCTTCGGTGAATCTGCTCCGGCAGAGCTGCTGTTTGAAGAGTTCGGCTTCACTGTTGATAACGTTGTTGCGAAAGCAAAAGAACTGCTGTAA", 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"MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMPSDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL", - "protein_translation_length": 663, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11291" - ], - [ - "gene_synonym", - "b2936" - ], - [ - "gene_synonym", - "GI:90111514" - ], - [ - "gene_synonym", - "yggG" - ], - [ - "gene_synonym", - "ECK2931" - ], - [ - "gene_synonym", - "loiP" - ], - [ - "gene_synonym", - "ASAP:ABE-0009629" - ], - [ - "gene_synonym", - "NP_417411.2" - ], - [ - "gene_synonym", - "JW2903" - ], - [ - "gene_synonym", - "GeneID:945173" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25894" - ] - ], - "dna_sequence": "ATGAAAATTCGCGCCTTATTGGTAGCAATGAGCGTGGCAACGGTACTGACTGGTTGCCAGAATATGGACTCCAACGGACTGCTCTCATCAGGAGCGGAAGCTTTTCAGGCTTACAGTTTGAGTGATGCGCAGGTGAAAACCCTGAGCGATCAGGCATGTCAGGAGATGGACAGCAAGGCGACGATTGCGCCAGCCAATAGCGAATACGCTAAACGTCTGACAACTATTGCCAATGCGCTAGGCAACAATATCAACGGTCAGCCGGTAAATTACAAAGTGTATATGGCGAAGGATGTGAACGCCTTTGCAATGGCTAACGGCTGTATCCGCGTCTATAGCGGGCTGATGGATATGATGACGGATAACGAAGTCGAAGCGGTGATCGGTCACGAAATGGGGCACGTGGCGTTAGGCCATGTGAAAAAAGGAATGCAGGTGGCACTTGGTACAAATGCCGTGCGAGTAGCTGCGGCCTCTGCGGGCGGGATTGTCGGAAGTTTATCTCAATCACAACTTGGTAATCTGGGCGAGAAATTAGTCAATTCGCAATTCTCCCAGCGCCAGGAAGCAGAAGCCGATGATTATTCTTACGATCTTCTGCGCCAACGCGGCATCAGCCCGGCAGGTCTTGCCACCAGCTTTGAAAAACTGGCAAAACTGGAAGAAGGTCGCCAAAGCTCAATGTTTGACGACCATCCTGCATCCGCCGAACGCGCCCAGCATATTCGCGATCGCATGAGCGCGGATGGGATTAAGTAA", - "dna_sequence_length": 759, - "functions": [ - "Phe-Phe periplasmic metalloprotease, OM lipoprotein", - "low salt-inducible", - "Era-binding heat shock protein" - ], - "id": "CDS_2892", - "location": [ - [ - "NC_000913", - 3081913, - "+", - 759 - ] - ], - "md5": "08f4e717e26f662f7134be0bb1c4f0fe", - "parent_gene": "", - "protein_md5": "5c9a05397a9e983ceb13bcff0c3df5f1", - "protein_translation": "MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQVKTLSDQACQEMDSKATIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAFAMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASAGGIVGSLSQSQLGNLGEKLVNSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLAKLEEGRQSSMFDDHPASAERAQHIRDRMSADGIK", - "protein_translation_length": 252, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947715" - ], - [ - "gene_synonym", - "EcoGene:EG10960" - ], - [ - "gene_synonym", - "b2937" - ], - [ - "gene_synonym", - "ECK2932" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60651" - ], - [ - "gene_synonym", - "JW2904" - ], - [ - "gene_synonym", - "NP_417412.1" - ], - [ - "gene_synonym", - "GI:16130838" - ], - [ - "gene_synonym", - "ASAP:ABE-0009632" - ], - [ - "gene_synonym", - "speB" - ] - ], - "dna_sequence": "ATGAGCACCTTAGGTCATCAATACGATAACTCACTGGTTTCCAATGCCTTTGGTTTTTTACGCCTGCCGATGAACTTCCAGCCGTATGACAGCGATGCAGACTGGGTGATTACTGGCGTGCCGTTCGATATGGCCACTTCTGGTCGTGCGGGTGGTCGCCACGGTCCGGCAGCGATCCGTCAGGTTTCGACGAATCTGGCCTGGGAACACAACCGCTTCCCGTGGAATTTCGACATGCGTGAGCGTCTGAACGTCGTGGACTGCGGCGATCTGGTATATGCCTTTGGCGATGCCCGTGAGATGAGCGAAAAGCTGCAGGCGCACGCCGAGAAGCTGCTGGCTGCCGGTAAGCGTATGCTCTCTTTCGGTGGTGACCACTTTGTTACGCTGCCGCTGCTGCGTGCTCATGCGAAGCATTTCGGCAAAATGGCGCTGGTACACTTTGACGCCCACACCGATACCTATGCGAACGGTTGTGAATTTGACCACGGCACTATGTTCTATACCGCGCCGAAAGAAGGTCTGATCGACCCGAATCATTCCGTGCAGATTGGTATTCGTACCGAGTTTGATAAAGACAACGGCTTTACCGTGCTGGACGCCTGCCAGGTGAACGATCGCAGCGTGGATGACGTTATCGCCCAAGTGAAACAGATTGTGGGTGATATGCCGGTTTACCTGACTTTTGATATCGACTGCCTGGATCCTGCTTTTGCACCAGGCACCGGTACGCCAGTGATTGGCGGCCTGACCTCCGATCGCGCTATTAAACTGGTACGCGGCCTGAAAGATCTCAACATTGTTGGGATGGACGTAGTGGAAGTGGCTCCGGCATACGATCAGTCGGAAATCACTGCTCTGGCAGCGGCAACGCTGGCGCTGGAAATGCTGTATATTCAGGCGGCGAAAAAGGGCGAGTAA", - "dna_sequence_length": 921, - "functions": [ - "agmatinase" - ], - "id": "CDS_2893", - "location": [ - [ - "NC_000913", - 3083797, - "-", - 921 - ] - ], - "md5": "da639a8382dea14d32264172811bee04", - "parent_gene": "", - "protein_md5": "3ba845c9be72bc9c13e72f5f445d2750", - "protein_translation": "MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDMATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMSEKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCEFDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQIVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVAPAYDQSEITALAAATLALEMLYIQAAKKGE", - "protein_translation_length": 306, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417413.1" - ], - [ - "gene_synonym", - "GeneID:947432" - ], - [ - "gene_synonym", - "b2938" - ], - [ - "gene_synonym", - "JW2905" - ], - [ - "gene_synonym", - "EcoGene:EG10959" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21170" - ], - [ - "gene_synonym", - "ECK2933" - ], - [ - "gene_synonym", - "GI:16130839" - ], - [ - "gene_synonym", - "ASAP:ABE-0009634" - ], - [ - "gene_synonym", - "speA" - ] - ], - "dna_sequence": "ATGTCTGACGACATGTCTATGGGTTTGCCTTCGTCAGCGGGCGAACACGGTGTACTACGCTCCATGCAGGAGGTTGCAATGAGCTCCCAGGAAGCCAGCAAGATGCTGCGTACTTACAATATTGCCTGGTGGGGCAATAACTACTATGACGTTAACGAGCTGGGCCACATTAGCGTGTGCCCGGACCCGGACGTCCCGGAAGCTCGCGTCGATCTCGCGCAGTTAGTGAAAACTCGTGAAGCACAGGGCCAGCGTCTGCCTGCACTGTTCTGTTTCCCACAGATCCTGCAGCACCGTTTGCGTTCCATTAACGCCGCGTTCAAACGTGCGAGGGAATCCTACGGCTATAACGGCGATTACTTCCTTGTTTATCCGATCAAAGTTAACCAGCACCGCCGCGTGATTGAGTCCCTGATTCATTCGGGCGAACCGCTGGGTCTGGAAGCCGGTTCCAAAGCCGAGTTGATGGCAGTACTGGCACATGCTGGCATGACCCGTAGCGTCATCGTCTGCAACGGTTATAAAGACCGCGAATATATCCGCCTGGCATTAATTGGCGAGAAGATGGGGCACAAGGTCTATCTGGTCATTGAGAAGATGTCAGAAATCGCCATTGTGCTGGATGAAGCAGAACGTCTGAATGTCGTTCCTCGTCTGGGCGTGCGTGCACGTCTGGCTTCGCAGGGTTCGGGTAAATGGCAGTCCTCCGGCGGGGAAAAATCGAAGTTCGGCCTGGCTGCGACTCAGGTACTGCAACTGGTTGAAACCCTGCGTGAAGCCGGGCGTCTCGACAGCCTGCAACTACTGCACTTCCACCTCGGTTCGCAGATGGCGAATATTCGCGATATCGCGACAGGCGTTCGTGAATCCGCGCGTTTCTATGTGGAACTGCACAAGCTGGGCGTCAATATTCAGTGCTTCGACGTCGGCGGCGGTCTGGGCGTGGATTATGAAGGTACTCGTTCGCAGTCCGACTGTTCGGTGAACTACGGCCTCAATGAATACGCCAACAACATTATCTGGGCGATTGGCGATGCGTGTGAAGAAAACGGTCTGCCGCATCCGACGGTAATCACCGAATCGGGTCGTGCGGTGACTGCGCATCACACCGTGCTGGTGTCTAATATCATCGGCGTGGAACGTAACGAATACACGGTGCCGACCGCGCCTGCAGAAGATGCGCCGCGCGCGCTGCAAAGCATGTGGGAAACCTGGCAGGAGATGCACGAACCGGGAACTCGCCGTTCTCTGCGTGAATGGTTACACGACAGTCAGATGGATCTGCACGACATTCATATCGGCTACTCTTCCGGCATCTTTAGCCTGCAAGAACGTGCATGGGCTGAGCAGCTTTATTTGAGCATGTGCCATGAAGTGCAAAAGCAGCTGGATCCGCAAAACCGTGCTCATCGTCCGATTATCGACGAGCTGCAGGAACGTATGGCGGACAAAATGTACGTCAACTTCTCGCTGTTCCAGTCGATGCCGGACGCATGGGGGATCGACCAGTTGTTCCCGGTTCTGCCGCTGGAAGGGCTGGATCAAGTGCCGGAACGTCGCGCTGTGCTGCTGGATATTACCTGTGACTCTGACGGTGCTATCGACCACTATATTGATGGTGACGGTATTGCCACGACAATGCCAATGCCGGAGTACGATCCAGAGAATCCGCCGATGCTCGGTTTCTTTATGGTCGGCGCATATCAGGAGATCCTCGGCAACATGCACAACCTGTTCGGTGATACCGAAGCGGTTGACGTGTTCGTCTTCCCTGACGGTAGCGTAGAAGTAGAACTGTCTGACGAAGGCGATACCGTGGCGGACATGCTGCAATATGTACAGCTCGATCCGAAAACGCTGTTAACCCAGTTCCGCGATCAAGTGAAGAAAACCGATCTTGATGCTGAACTGCAACAACAGTTCCTTGAAGAGTTCGAGGCAGGTTTGTACGGTTATACTTATCTTGAAGATGAGTAA", 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- "protein_translation_length": 658, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13164" - ], - [ - "gene_synonym", - "GeneID:947433" - ], - [ - "gene_synonym", - "b2939" - ], - [ - "gene_synonym", - "GI:145698307" - ], - [ - "gene_synonym", - "ECK2934" - ], - [ - "gene_synonym", - "ASAP:ABE-0009638" - ], - [ - "gene_synonym", - "JW2906" - ], - [ - "gene_synonym", - "NP_417414.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64567" - ], - [ - "gene_synonym", - "yqgB" - ] - ], - "dna_sequence": "ATGAAAAAGAAACCGGTTGCGCAGTTGGAGCGTCAGCATTCACTGCTGGAAAATCCATGTGCTTATGGGTTGTTATCGCAGTTCCAGGCTGCGATAGTCGTTAACTGTTTTACACTTAATAAAATAATTTGA", - "dna_sequence_length": 132, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2895", - "location": [ - [ - "NC_000913", - 3086051, - "-", - 132 - ] - ], - "md5": "d517bbd409458a87575386f67642dda6", - "parent_gene": "", - "protein_md5": "73340d20313520da6931f65a511eadf0", - "protein_translation": "MKKKPVAQLERQHSLLENPCAYGLLSQFQAAIVVNCFTLNKII", - "protein_translation_length": 43, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130841" - ], - [ - "gene_synonym", - "b2940" - ], - [ - "gene_synonym", - "EcoGene:EG13165" - ], - [ - "gene_synonym", - "ASAP:ABE-0009643" - ], - [ - "gene_synonym", - "ECK2935" - ], - [ - "gene_synonym", - "JW2907" - ], - [ - "gene_synonym", - "NP_417415.1" - ], - [ - "gene_synonym", - "yqgC" - ], - [ - "gene_synonym", - "GeneID:945052" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64570" - ] - ], - "dna_sequence": "ATGGGTATAACATCGGCAGGTATGCAAAGCAGAGATGCAGAGTGCGGGGAACGAATCTTCACCAGAACGGTGAGACAGGTTAAGCAGCAGACAACGGTTCATTATTTCGTATCACCTCCACGGCCGCCTGTTAAGACGAACCCACAAGCCAAAACTCTGATTTCAACCCGGCTGGAAGTGGCAACACGAAAGAAACGTCGTGTGCTTTTTATTTAA", - "dna_sequence_length": 216, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2896", - "location": [ - [ - "NC_000913", - 3086187, - "+", - 216 - ] - ], - "md5": "82c6bf741fc1c107a85cb772264bcd65", - "parent_gene": "", - "protein_md5": "e84f0f71a44ddde5fb2cdbae2a17602b", - "protein_translation": "MGITSAGMQSRDAECGERIFTRTVRQVKQQTTVHYFVSPPRPPVKTNPQAKTLISTRLEVATRKKRRVLFI", - "protein_translation_length": 71, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009650" - ], - [ - "gene_synonym", - "NP_417417.1" - ], - [ - "gene_synonym", - "GI:16130843" - ], - [ - "gene_synonym", - "b2942" - ], - [ - "gene_synonym", - "metX" - ], - [ - "gene_synonym", - "ECK2937" - ], - [ - "gene_synonym", - "GeneID:945389" - ], - [ - "gene_synonym", - "EcoGene:EG10589" - ], - [ - "gene_synonym", - "metK" - ], - [ - "gene_synonym", - "JW2909" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A817" - ] - ], - "dna_sequence": "ATGGCAAAACACCTTTTTACGTCCGAGTCCGTCTCTGAAGGGCATCCTGACAAAATTGCTGACCAAATTTCTGATGCCGTTTTAGACGCGATCCTCGAACAGGATCCGAAAGCACGCGTTGCTTGCGAAACCTACGTAAAAACCGGCATGGTTTTAGTTGGCGGCGAAATCACCACCAGCGCCTGGGTAGACATCGAAGAGATCACCCGTAACACCGTTCGCGAAATTGGCTATGTGCATTCCGACATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCACACCGTCTGGTACAGCGTCAGGCTGAAGTGCGTAAAAACGGCACTCTGCCGTGGCTGCGCCCGGACGCGAAAAGCCAGGTGACTTTTCAGTATGACGACGGCAAAATCGTTGGTATCGATGCTGTCGTGCTTTCCACTCAGCACTCTGAAGAGATCGACCAGAAATCGCTGCAAGAAGCGGTAATGGAAGAGATCATCAAGCCAATTCTGCCCGCTGAATGGCTGACTTCTGCCACCAAATTCTTCATCAACCCGACCGGTCGTTTCGTTATCGGTGGCCCAATGGGTGACTGCGGTCTGACTGGTCGTAAAATTATCGTTGATACCTACGGCGGCATGGCGCGTCACGGTGGCGGTGCATTCTCTGGTAAAGATCCATCAAAAGTGGACCGTTCCGCAGCCTACGCAGCACGTTATGTCGCGAAAAACATCGTTGCTGCTGGCCTGGCCGATCGTTGTGAAATTCAGGTTTCCTACGCAATCGGCGTGGCTGAACCGACCTCCATCATGGTAGAAACTTTCGGTACTGAGAAAGTGCCTTCTGAACAACTGACCCTGCTGGTACGTGAGTTCTTCGACCTGCGCCCATACGGTCTGATTCAGATGCTGGATCTGCTGCACCCGATCTACAAAGAAACCGCAGCATACGGTCACTTTGGTCGTGAACATTTCCCGTGGGAAAAAACCGACAAAGCGCAGCTGCTGCGCGATGCTGCCGGTCTGAAGTAA", 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"gene_synonym", - "NP_417418.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009654" - ], - [ - "gene_synonym", - "JW2910" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEP1" - ], - [ - "gene_synonym", - "galP" - ], - [ - "gene_synonym", - "EcoGene:EG12148" - ] - ], - "dna_sequence": "ATGCCTGACGCTAAAAAACAGGGGCGGTCAAACAAGGCAATGACGTTTTTCGTCTGCTTCCTTGCCGCTCTGGCGGGATTACTCTTTGGCCTGGATATCGGTGTAATTGCTGGCGCACTGCCGTTTATTGCAGATGAATTCCAGATTACTTCGCACACGCAAGAATGGGTCGTAAGCTCCATGATGTTCGGTGCGGCAGTCGGTGCGGTGGGCAGCGGCTGGCTCTCCTTTAAACTCGGGCGCAAAAAGAGCCTGATGATCGGCGCAATTTTGTTTGTTGCCGGTTCGCTGTTCTCTGCGGCTGCGCCAAACGTTGAAGTACTGATTCTTTCCCGCGTTCTACTGGGGCTGGCGGTGGGTGTGGCCTCTTATACCGCACCGCTGTACCTCTCTGAAATTGCGCCGGAAAAAATTCGTGGCAGTATGATCTCGATGTATCAGTTGATGATCACTATCGGGATCCTCGGTGCTTATCTTTCTGATACCGCCTTCAGCTACACCGGTGCATGGCGCTGGATGCTGGGTGTGATTATCATCCCGGCAATTTTGCTGCTGATTGGTGTCTTCTTCCTGCCAGACAGCCCACGTTGGTTTGCCGCCAAACGCCGTTTTGTTGATGCCGAACGCGTGCTGCTACGCCTGCGTGACACCAGCGCGGAAGCGAAACGCGAACTGGATGAAATCCGTGAAAGTTTGCAGGTTAAACAGAGTGGCTGGGCGCTGTTTAAAGAGAACAGCAACTTCCGCCGCGCGGTGTTCCTTGGCGTACTGTTGCAGGTAATGCAGCAATTCACCGGGATGAACGTCATCATGTATTACGCGCCGAAAATCTTCGAACTGGCGGGTTATACCAACACTACCGAGCAAATGTGGGGGACCGTGATTGTCGGCCTGACCAACGTACTTGCCACCTTTATCGCAATCGGCCTTGTTGACCGCTGGGGACGTAAACCAACGCTAACGCTGGGCTTCCTGGTGATGGCTGCTGGCATGGGCGTACTCGGTACAATGATGCATATCGGTATTCACTCTCCGTCGGCGCAGTATTTCGCCATCGCCATGCTGCTGATGTTTATTGTCGGTTTTGCCATGAGTGCCGGTCCGCTGATTTGGGTACTGTGCTCCGAAATTCAGCCGCTGAAAGGCCGCGATTTTGGCATCACCTGCTCCACTGCCACCAACTGGATTGCCAACATGATCGTTGGCGCAACGTTCCTGACCATGCTCAACACGCTGGGTAACGCCAACACCTTCTGGGTGTATGCGGCTCTGAACGTACTGTTTATCCTGCTGACATTGTGGCTGGTACCGGAAACCAAACACGTTTCGCTGGAACATATTGAACGTAATCTGATGAAAGGTCGTAAACTGCGCGAAATAGGCGCTCACGATTAA", - "dna_sequence_length": 1395, - "functions": [ - "D-galactose transporter" - ], - "id": "CDS_2898", - "location": [ - [ - "NC_000913", - 3088284, - "+", - 1395 - ] - ], - "md5": "d925959ee8337168819ab8efbac79cad", - "parent_gene": "", - "protein_md5": "fbf57f1403d47a941868a613ff5fdbf7", - "protein_translation": "MPDAKKQGRSNKAMTFFVCFLAALAGLLFGLDIGVIAGALPFIADEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYTGAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEIRESLQVKQSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQYFAIAMLLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNTLGNANTFWVYAALNVLFILLTLWLVPETKHVSLEHIERNLMKGRKLREIGAHD", - "protein_translation_length": 464, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2944" - ], - [ - "gene_synonym", - "GeneID:947443" - ], - [ - "gene_synonym", - "ECK2939" - ], - [ - "gene_synonym", - "yggI" - ], - [ - "gene_synonym", - "GI:16130845" - ], - [ - "gene_synonym", - "EcoGene:EG12122" - ], - [ - "gene_synonym", - "sprT" - ], - [ - "gene_synonym", - "ASAP:ABE-0009657" - ], - [ - "gene_synonym", - "NP_417419.1" - ], - [ - "gene_synonym", - "JW2911" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39902" - ] - ], - "dna_sequence": "ATGAAAACATCCCGTCTCCCTATCGCCATCCAACAGGCCGTTATGCGTCGCCTGCGGGAAAAACTCGCCCAGGCCAACCTGAAGCTAGGGCGTAACTACCCGGAGCCAAAACTCTCTTACACCCAGCGCGGAACCTCCGCCGGAACGGCCTGGCTGGAAAGCTATGAAATTCGCCTCAATCCCGTTTTGCTGTTGGAAAACAGTGAAGCTTTTATTGAAGAAGTGGTACCGCACGAACTGGCACATTTGCTGGTATGGAAACATTTCGGCCGCGTAGCGCCACATGGCAAAGAGTGGAAGTGGATGATGGAAAACGTGCTGGGTGTTCCCGCCCGTCGTACGCATCAGTTCGAACTGCAATCCGTGCGTCGCAACACCTTCCCCTACCGCTGCAAGTGCCAGGAGCATCAGCTTACCGTACGCCGCCATAATCGCGTAGTTCGTGGCGAGGCCGTCTATCGCTGTGTTCACTGCGGTGAACAGCTGGTTGCGAAATAA", - "dna_sequence_length": 498, - "functions": [ - "Zn-dependent metalloprotease-related protein" - ], - "id": "CDS_2899", - "location": [ - [ - "NC_000913", - 3089755, - "+", - 498 - ] - ], - "md5": "fb19916e4d60e1b1bfd84391110c65b4", - "parent_gene": "", - "protein_md5": "bf19bb159bc6957ac8dccfd73e5ec169", - "protein_translation": "MKTSRLPIAIQQAVMRRLREKLAQANLKLGRNYPEPKLSYTQRGTSAGTAWLESYEIRLNPVLLLENSEAFIEEVVPHELAHLLVWKHFGRVAPHGKEWKWMMENVLGVPARRTHQFELQSVRRNTFPYRCKCQEHQLTVRRHNRVVRGEAVYRCVHCGEQLVAK", - "protein_translation_length": 165, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2945" - ], - [ - "gene_synonym", - "ASAP:ABE-0009661" - ], - [ - "gene_synonym", - "GI:16130846" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25736" - ], - [ - "gene_synonym", - "NP_417420.1" - ], - [ - "gene_synonym", - "endA" - ], - [ - "gene_synonym", - "JW2912" - ], - [ - "gene_synonym", - "EcoGene:EG11336" - ], - [ - "gene_synonym", - "GeneID:949092" - ], - [ - "gene_synonym", - "ECK2940" - ] - ], - "dna_sequence": "ATGTACCGTTATTTGTCTATTGCTGCGGTGGTACTGAGCGCAGCATTTTCCGGCCCGGCGTTGGCCGAAGGTATCAATAGTTTTTCTCAGGCGAAAGCCGCGGCGGTAAAAGTCCACGCTGACGCGCCCGGTACGTTTTATTGCGGATGTAAAATTAACTGGCAGGGCAAAAAAGGCGTTGTTGATCTGCAATCGTGCGGCTATCAGGTGCGCAAAAATGAAAACCGCGCCAGCCGCGTAGAGTGGGAACATGTCGTTCCCGCCTGGCAGTTCGGTCACCAGCGCCAGTGCTGGCAGGACGGTGGACGTAAAAACTGCGCTAAAGATCCGGTCTATCGCAAGATGGAAAGCGATATGCATAACCTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAGCTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATCCGGTTACCGACTGGGAGTGCGAGCGCGATGAACGCATCGCGAAGGTGCAGGGCAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAA", - "dna_sequence_length": 708, - "functions": [ - "DNA-specific endonuclease I" - ], - "id": "CDS_2900", - "location": [ - [ - "NC_000913", - 3090347, - "+", - 708 - ] - ], - "md5": "f29f874bd913f2e09e712a861134ac6c", - "parent_gene": "", - "protein_md5": "d3f4a81e1ecf0eb29709388199333600", - "protein_translation": "MYRYLSIAAVVLSAAFSGPALAEGINSFSQAKAAAVKVHADAPGTFYCGCKINWQGKKGVVDLQSCGYQVRKNENRASRVEWEHVVPAWQFGHQRQCWQDGGRKNCAKDPVYRKMESDMHNLQPSVGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKEKAAEPPARARGAIARTYFYMRDQYNLTLSRQQTQLFNAWNKMYPVTDWECERDERIAKVQGNHNPYVQRACQARKS", - "protein_translation_length": 235, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b2946" - ], - [ - "gene_synonym", - "yggJ" - ], - [ - "gene_synonym", - "rsmE" - ], - [ - "gene_synonym", - "NP_417421.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0009665" - ], - [ - "gene_synonym", - "JW2913" - ], - [ - "gene_synonym", - "GI:90111515" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGL7" - ], - [ - "gene_synonym", - "GeneID:945816" - ], - [ - "gene_synonym", - "ECK2941" - ], - [ - "gene_synonym", - "EcoGene:EG12366" - ] - ], - "dna_sequence": "ATGCGTATCCCCCGCATTTATCATCCTGAACCACTGACCAGCCATTCTCACATCGCGCTTTGCGAAGATGCCGCCAACCATATCGGGCGCGTACTGCGCATGGGGCCGGGGCAGGCGTTGCAATTGTTTGACGGTAGCAACCAGGTCTTTGACGCCGAAATTACCAGCGCCAGCAAAAAAAGCGTGGAAGTGAAGGTGCTGGAAGGCCAGATCGACGATCGCGAATCTCCGCTGCATATTCACCTCGGTCAGGTGATGTCGCGTGGTGAAAAAATGGAATTTACTATCCAGAAATCGATCGAACTCGGTGTAAGCCTCATTACGCCACTTTTTTCTGAGCGCTGCGGCGTTAAACTGGATAGTGAACGTCTGAACAAGAAGCTTCAGCAGTGGCAGAAGATTGCAATTGCTGCCTGTGAGCAGTGTGGTCGTAACCGGGTGCCGGAAATCCGTCCAGCGATGGATCTGGAAGCCTGGTGTGCAGAGCAGGATGAAGGACTGAAACTGAATCTTCACCCGCGCGCCAGTAACAGCATCAATACGTTGCCGTTACCGGTTGAACGCGTCCGCCTGCTGATTGGCCCGGAAGGCGGTTTATCGGCAGATGAAATTGCCATGACTGCCCGCTATCAATTTACTGATATCCTGTTGGGACCTCGCGTTTTGCGTACAGAGACAACTGCGCTCACCGCCATTACCGCGCTACAAGTACGATTTGGCGATTTGGGCTAA", - "dna_sequence_length": 732, - "functions": [ - "16S rRNA m(3)U1498 methyltransferase, SAM-dependent" - ], - "id": "CDS_2901", - "location": [ - [ - "NC_000913", - 3091134, - "+", - 732 - ] - ], - "md5": "8d238ee87d924f3b12eb0740b7f4b360", - "parent_gene": "", - "protein_md5": "cdd5f9cab8a3311b675752041f458eed", - "protein_translation": "MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFDGSNQVFDAEITSASKKSVEVKVLEGQIDDRESPLHIHLGQVMSRGEKMEFTIQKSIELGVSLITPLFSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWCAEQDEGLKLNLHPRASNSINTLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLGPRVLRTETTALTAITALQVRFGDLG", - "protein_translation_length": 243, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009667" - ], - [ - "gene_synonym", - "b2947" - ], - [ - "gene_synonym", - "GeneID:947445" - ], - [ - "gene_synonym", - "gshB" - ], - [ - "gene_synonym", - "gsh-II" - ], - [ - "gene_synonym", - "GI:16130848" - ], - [ - "gene_synonym", - "EcoGene:EG10419" - ], - [ - "gene_synonym", - "JW2914" - ], - [ - "gene_synonym", - "NP_417422.1" - ], - [ - "gene_synonym", - "ECK2942" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04425" - ] - ], - "dna_sequence": "ATGATCAAGCTCGGCATCGTGATGGACCCCATCGCAAACATCAACATCAAGAAAGATTCCAGTTTTGCTATGTTGCTGGAAGCACAGCGTCGTGGTTACGAACTTCACTATATGGAGATGGGCGATCTGTATCTGATCAATGGTGAAGCCCGCGCCCATACCCGCACGCTGAACGTGAAGCAGAACTACGAAGAGTGGTTTTCGTTCGTCGGTGAACAGGATCTGCCGCTGGCCGATCTCGATGTGATCCTGATGCGTAAAGACCCGCCGTTTGATACCGAGTTTATCTACGCGACCTATATTCTGGAACGTGCCGAAGAGAAAGGGACGCTGATCGTTAACAAGCCGCAGAGCCTGCGCGACTGTAACGAGAAACTGTTTACCGCCTGGTTCTCTGACTTAACGCCAGAAACGCTGGTTACGCGCAATAAAGCGCAGCTAAAAGCGTTCTGGGAGAAACACAGCGACATCATTCTTAAGCCGCTGGACGGTATGGGCGGCGCGTCGATTTTCCGCGTGAAAGAAGGCGATCCAAACCTCGGCGTGATTGCCGAAACCCTGACTGAGCATGGCACTCGCTACTGCATGGCGCAAAATTACCTGCCAGCCATTAAAGATGGCGACAAACGCGTGCTGGTGGTGGATGGCGAGCCGGTACCGTACTGCCTGGCGCGTATTCCGCAGGGGGGCGAAACCCGTGGCAATCTGGCTGCCGGTGGTCGCGGTGAACCTCGTCCGCTGACGGAAAGTGACTGGAAAATCGCCCGTCAGATCGGGCCGACGCTGAAAGAAAAAGGGCTGATTTTTGTTGGTCTGGATATCATCGGCGACCGTCTGACTGAAATTAACGTCACCAGCCCAACCTGTATTCGTGAGATTGAAGCAGAGTTTCCGGTGTCGATCACCGGAATGTTAATGGATGCCATCGAAGCACGTTTACAGCAGCAGTAA", - "dna_sequence_length": 951, - "functions": 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"yqgE" - ], - [ - "gene_synonym", - "ECK2943" - ], - [ - "gene_synonym", - "EcoGene:EG13289" - ] - ], - "dna_sequence": "ATGAATTTACAGCATCACTTTCTTATTGCCATGCCTGCTCTCCAGGATCCGATTTTCCGTCGTTCCGTGGTCTACATTTGCGAACATAATACCAATGGTGCAATGGGGATCATCGTCAACAAGCCGCTGGAAAATCTCAAAATTGAAGGGATTCTGGAAAAGCTGAAGATCACGCCGGAGCCGCGTGATGAATCAATCCGTCTGGATAAACCGGTTATGCTCGGCGGTCCGCTGGCTGAAGATCGCGGGTTTATTTTGCATACTCCGCCCTCCAATTTTGCTTCCAGCATTCGCATTTCAGACAACACGGTAATGACCACTTCCCGCGATGTGCTGGAAACGCTCGGCACCGATAAACAACCGTCTGACGTATTGGTGGCTCTGGGTTATGCCTCCTGGGAGAAAGGTCAACTGGAACAAGAAATTCTCGATAACGCGTGGCTAACGGCCCCGGCAGATCTGAATATTCTGTTCAAAACGCCGATTGCCGACCGCTGGCGCGAGGCGGCAAAACTGATTGGTGTGGATATTCTCACCATGCCTGGTGTGGCAGGACACGCCTGA", - "dna_sequence_length": 564, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_2903", - "location": [ - [ - "NC_000913", - 3092937, - "+", - 564 - ] - ], - "md5": "708ee009f5532d22c64773273ee0f4e3", - "parent_gene": "", - "protein_md5": "fb8570c0e78a414e59aca3a077fd1ffa", - "protein_translation": "MNLQHHFLIAMPALQDPIFRRSVVYICEHNTNGAMGIIVNKPLENLKIEGILEKLKITPEPRDESIRLDKPVMLGGPLAEDRGFILHTPPSNFASSIRISDNTVMTTSRDVLETLGTDKQPSDVLVALGYASWEKGQLEQEILDNAWLTAPADLNILFKTPIADRWREAAKLIGVDILTMPGVAGHA", - "protein_translation_length": 187, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130850" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8I1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009672" - ], - [ - "gene_synonym", - "GeneID:947439" - ], - [ - "gene_synonym", - "b2949" - ], - [ - "gene_synonym", - "NP_417424.1" - ], - [ - "gene_synonym", - "EcoGene:EG13290" - ], - [ - "gene_synonym", - "JW2916" - ], - [ - "gene_synonym", - "yqgF" - ], - [ - "gene_synonym", - "ECK2944" - ] - ], - "dna_sequence": "ATGAGTGGAACCTTACTCGCCTTCGACTTCGGCACCAAAAGCATTGGCGTAGCGGTCGGCCAACGCATTACCGGCACCGCTCGCCCTTTGCCTGCAATTAAAGCACAGGACGGTACGCCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCAGCCGGACGAAATCATCGTCGGTTTGCCGCTGAATATGGACGGCACCGAGCAACCATTGACTGCCAGAGCGCGTAAATTTGCCAACCGTATTCATGGCCGTTTCGGTGTTGAAGTAAAGCTCCATGACGAGCGTCTTAGCACTGTGGAAGCCCGTTCCGGTCTGTTTGAACAGGGCGGCTATCGGGCGCTCAACAAAGGCAAAGTTGACTCTGCCTCTGCGGTTATTATTCTCGAAAGCTATTTCGAGCAGGGATATTAA", - "dna_sequence_length": 417, - "functions": [ - "putative Holliday junction resolvase" - ], - "id": "CDS_2904", - "location": [ - [ - "NC_000913", - 3093500, - "+", - 417 - ] - ], - "md5": "61f365d10a3f9e63e89cf80c8725319e", - "parent_gene": "", - "protein_md5": "3de6d0f21d64656307f7b3cd91c2ee03", - "protein_translation": "MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY", - "protein_translation_length": 138, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417425.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52052" - ], - [ - "gene_synonym", - "GeneID:947430" - ], - [ - "gene_synonym", - "ASAP:ABE-0009675" - ], - [ - "gene_synonym", - "GI:90111517" - ], - [ - "gene_synonym", - "EcoGene:EG12978" - ], - [ - "gene_synonym", - "JW2917" - ], - [ - "gene_synonym", - "ECK2945" - ], - [ - "gene_synonym", - "b2950" - ], - [ - "gene_synonym", - "yggR" - ] - ], - "dna_sequence": "ATGAATATGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAACGTCTCGGATCTACACCTGTGCAGCGCCTGGCCCGCACGATGGCGCATTCGCGGCAGAATGGAAGCTGCGCCGTTTGATACGCCGGACGTCGAAGAGCTACTGCGGGAGTGGCTGGATGACGATCAGCGGGCAATATTGCTGGAGAATGGTCAGCTGGATTTTGCCGTGTCGCTGGCGGAAAACCAGCGATTGCGTGGCAGCGCATTCGCGCAACGGCATGGCATTTCGCTGGCGTTACGGCTGTTACCTTCGCACTGCCCGCAGCTCGAACAGCTTGGCGCACCAACGGTATTGCCGGAATTACTCAAGAGCGAGAATGGCCTGATTCTGGTGACGGGGGCGACGGGGAGTGGCAAATCTACCACGCTGGCGGCGATGGTTGGCTATCTCAATCAACATGCCGATGCGCATATTCTGACGCTGGAAGATCCTGTTGAATATCTCTATGCCAGCCAGCGATGTTTGATCCAGCAGCGGGAAATTGGTTTGCACTGTATGACGTTCGCATCGGGATTGCGGGCCGCATTGCGGGAAGATCCTGATGTGATTTTGCTCGGAGAGCTGCGTGACAGCGAGACAATCCGTCTGGCACTGACGGCGGCAGAAACCGGGCATTTGGTGCTGGCAACATTACATACGCGTGGTGCCGCGCAGGCAGTTGAGCGACTGGTGGATTCATTTCCGGCGCAGGAAAAAGACCCCGTGCGTAATCAACTGGCAGGTAGTTTACGGGCAGTGCTGTCACAAAAGCTGGAAGTGGATAAACAGGAAGGACGCGTGGCGCTATTTGAATTGCTGATTAACACACCCGCGGTGGGGAATTTGATTCGCGAAGGGAAAACCCACCAGTTACCGCATGTTATTCAAACCGGGCAGCAGGTGGGGATGATAACGTTTCAGCAGAGTTATCAGCACCGGGTGGGGGAAGGGCGTTTGTGA", - "dna_sequence_length": 981, - "functions": [ - "putative PilT family AAA+ ATPase" - ], - "id": "CDS_2905", - "location": [ - [ - "NC_000913", - 3095080, - "-", - 981 - ] - ], - "md5": "7ddc028f4782b3df85f1736fccc05fa8", - "parent_gene": "", - "protein_md5": "7f622f89c96eaf40d792ed8e5e1774a6", - "protein_translation": "MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGRMEAAPFDTPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQLEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVALFELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQHRVGEGRL", - "protein_translation_length": 326, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130852" - ], - [ - "gene_synonym", - "ASAP:ABE-0009681" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67080" - ], - [ - "gene_synonym", - "EcoGene:EG12979" - ], - [ - "gene_synonym", - "GeneID:947423" - ], - [ - "gene_synonym", - "ECK2946" - ], - [ - "gene_synonym", - "b2951" - ], - [ - "gene_synonym", - "JW2918" - ], - [ - "gene_synonym", - "NP_417426.1" - ], - [ - "gene_synonym", - "yggS" - ] - ], - "dna_sequence": "ATGAACGATATTGCGCATAACCTGGCACAGGTCCGGGACAAAATCTCAGCGGCTGCAACGCGTTGCGGCCGTTCTCCAGAAGAAATTACGCTGCTTGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGGTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCTAATAAAAGCCGCCTGGTGGCAGAGCATTTCGACTGGTGTCATACCATCGACCGTTTGCGCATCGCTACCCGTCTCAACGACCAGCGCCCGGCAGAACTTCCCCCTCTTAACGTTCTGATTCAAATTAACATTAGTGATGAAAACAGTAAGTCCGGGATTCAACTGGCTGAACTGGACGAGCTGGCAGCTGCGGTCGCTGAACTACCGCGTTTACGTCTGCGCGGGTTGATGGCAATCCCTGCGCCTGAGTCAGAATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGTAGCATTTGCCGGACTGAAAACGCGCTACCCGCATATCGACACGCTCTCTCTGGGAATGTCGGACGATATGGAAGCCGCCATTGCGGCAGGTAGCACGATGGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAA", - "dna_sequence_length": 705, - "functions": [ - "UPF0001 family protein, PLP-binding" - ], - "id": "CDS_2906", - "location": [ - [ - "NC_000913", - 3095098, - "+", - 705 - ] - ], - "md5": "dbaf9f70c6a31d8f262bfbd6d76e3b3a", - "parent_gene": "", - "protein_md5": "2b68a56e970a5df33f6770665e758a03", - "protein_translation": "MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHTIDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRLRGLMAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK", - "protein_translation_length": 234, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130853" - ], - [ - "gene_synonym", - "GeneID:947421" - ], - [ - "gene_synonym", - "EcoGene:EG12980" - ], - [ - "gene_synonym", - "ASAP:ABE-0009685" - ], - [ - "gene_synonym", - "NP_417427.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64564" - ], - [ - "gene_synonym", - "b2952" - ], - [ - "gene_synonym", - "ECK2947" - ], - [ - "gene_synonym", - "yggT" - ], - [ - "gene_synonym", - "JW2919" - ] - ], - "dna_sequence": "ATGAATACGTTGACTTTCCTGCTTTCAACGGTCATTGAGCTGTATACCATGGTGCTGTTATTACGCATCTGGATGCAGTGGGCTCATTGTGATTTTTACAACCCCTTCTCACAGTTTGTAGTGAAGGTAACGCAGCCAATTATCGGGCCACTGCGCCGCGTTATTCCGGCAATGGGGCCAATTGACAGCGCCTCGCTGCTGGTTGCCTATATTCTCAGTTTTATCAAAGCCATCGTGCTGTTTAAAGTGGTGACCTTCCTGCCAATCATCTGGATTGCCGGTTTACTGATTCTGCTGAAAACCATCGGCCTGCTGATTTTCTGGGTCCTGCTGGTGATGGCGATTATGAGCTGGGTAAGCCAGGGGCGTAGCCCGATTGAATACGTGCTGATTCAGCTGGCCGATCCGCTGCTGCGCCCGATTCGCCGCCTGCTACCGGCAATGGGTGGGATTGATTTCTCGCCGATGATCCTCGTTCTGCTGCTGTATGTCATCAATATGGGTGTCGCAGAAGTATTACAGGCAACCGGAAATATGCTGCTGCCAGGGCTGTGGATGGCGTTATGA", - "dna_sequence_length": 567, - "functions": [ - "putative inner membrane protein", - "compensates for loss in K+ uptake" - ], - "id": "CDS_2907", - "location": [ - [ - "NC_000913", - 3095820, - "+", - 567 - ] - ], - "md5": "2ced2c3672b2ce9b3e4bb3f9630cd2ab", - "parent_gene": "", - "protein_md5": "7ad30a2f9c07ad0dff873afcdc2e3d07", - "protein_translation": "MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVTQPIIGPLRRVIPAMGPIDSASLLVAYILSFIKAIVLFKVVTFLPIIWIAGLLILLKTIGLLIFWVLLVMAIMSWVSQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVLLLYVINMGVAEVLQATGNMLLPGLWMAL", - "protein_translation_length": 188, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52060" - ], - [ - "gene_synonym", - "GI:90111518" - ], - [ - "gene_synonym", - "ASAP:ABE-0009690" - ], - [ - "gene_synonym", - "EcoGene:EG12981" - ], - [ - "gene_synonym", - "GeneID:947424" - ], - [ - "gene_synonym", - "NP_417428.2" - ], - [ - "gene_synonym", - "b2953" - ], - [ - "gene_synonym", - "JW5479" - ], - [ - "gene_synonym", - "ECK2948" - ], - [ - "gene_synonym", - "yggU" - ] - ], - "dna_sequence": "ATGAATGCCGTAACAGTTAATGATGACGGTCTGGTTTTACGGCTCTATATTCAGCCGAAAGCCAGCCGTGATTCTATTGTCGGTTTACATGGCGACGAAGTTAAAGTCGCCATTACCGCGCCGCCGGTTGACGGCCAGGCCAACAGTCATCTGGTGAAGTTTCTCGGTAAGCAATTCCGGGTTGCCAAAAGCCAGGTGGTGATTGAAAAAGGCGAACTTGGCCGCCACAAACAAATTAAAATCATTAATCCGCAACAAATCCCGCCAGAAATCGCGGCGTTAATTAATTAG", - "dna_sequence_length": 291, - "functions": [ - "UPF0235 family protein" - ], - "id": "CDS_2908", - "location": [ - [ - "NC_000913", - 3096383, - "+", - 291 - ] - ], - "md5": "ff793b78145983205fa3b4b1bc1c2e01", - "parent_gene": "", - "protein_md5": "9ff14c10435689ced467c34bba27c400", - "protein_translation": "MNAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN", - "protein_translation_length": 96, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947429" - ], - [ - "gene_synonym", - "ASAP:ABE-0009692" - ], - [ - "gene_synonym", - "ECK2949" - ], - [ - "gene_synonym", - "GI:16130855" - ], - [ - "gene_synonym", - "EcoGene:EG12982" - ], - [ - "gene_synonym", - "JW2921" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52061" - ], - [ - "gene_synonym", - "rdgB" - ], - [ - "gene_synonym", - "NP_417429.1" - ], - [ - "gene_synonym", - "yggV" - ], - [ - "gene_synonym", - "b2954" - ] - ], - "dna_sequence": "ATGCAAAAAGTTGTCCTCGCAACCGGCAATGTCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGATATCGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCCACTCCGCTGGTATGCCACGGTAGCTGGCCGGGCGTGATTACTCGTGAACCAGCGGGCACTGGTGGCTTTGGTTATGATCCAATCTTCTTCGTACCTTCCGAAGGGAAAACCGCCGCCGAACTGACCCGCGAAGAAAAGAGCGCCATTTCCCACCGTGGTCAGGCGTTGAAACTGCTGCTGGACGCTTTACGTAATGGTTAA", - "dna_sequence_length": 594, - "functions": [ - "dITP/XTP pyrophosphatase" - ], - "id": "CDS_2909", - "location": [ - [ - "NC_000913", - 3096681, - "+", - 594 - ] - ], - "md5": "62196f219be0b6b27d9adb668f49cdea", - "parent_gene": "", - "protein_md5": "b4c571a990cb9c6ffbe9b5d230d61838", - "protein_translation": "MQKVVLATGNVGKVRELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKVTALPAIADDSGLAVDVLGGAPGIYSARYSGEDATDQKNLQKLLETMKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIFFVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG", - "protein_translation_length": 197, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009694" - ], - [ - "gene_synonym", - "GI:16130856" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52062" - ], - [ - "gene_synonym", - "GeneID:947446" - ], - [ - "gene_synonym", - "JW2922" - ], - [ - "gene_synonym", - "ECK2950" - ], - [ - "gene_synonym", - "EcoGene:EG12983" - ], - [ - "gene_synonym", - "yggW" - ], - [ - "gene_synonym", - "NP_417430.1" - ], - [ - "gene_synonym", - "b2955" - ] - ], - "dna_sequence": "ATGGTTAAATTACCTCCGCTGAGTCTCTACATTCACATCCCGTGGTGCGTGCAGAAATGCCCGTACTGCGATTTCAACTCTCACGCGTTGAAAGGAGAAGTGCCGCACGACGATTATGTTCAGCATCTGCTTAACGATCTGGACAACGATGTGGCTTACGCTCAGGGCCGTGAAGTAAAGACAATCTTTATTGGCGGTGGTACGCCGAGCCTGCTTTCCGGCCCGGCGATGCAAACGCTGCTGGACGGCGTGCGTGCGCGTTTGCCGCTGGCAGCGGATGCAGAAATTACTATGGAAGCGAACCCTGGCACGGTAGAAGCCGATCGCTTTGTCGATTATCAGCGTGCTGGTGTGAACCGCATCTCTATTGGTGTGCAGAGTTTTAGCGAAGAAAAGCTGAAACGACTTGGGCGTATTCATGGCCCGCAAGAAGCGAAACGCGCGGCGAAGCTGGCGAGCGGTTTAGGGTTACGTAGCTTTAACCTTGATTTGATGCATGGGCTGCCGGATCAATCACTGGAAGAGGCGCTTGGCGATCTACGCCAGGCCATTGAACTGAATCCGCCGCATCTTTCCTGGTATCAACTGACCATCGAACCCAATACGCTGTTTGGTTCGCGACCACCGGTGCTGCCGGACGATGACGCGTTGTGGGATATATTCGAACAGGGGCATCAGTTATTAACCGCAGCGGGTTATCAGCAATATGAAACTTCCGCTTACGCCAAACCCGGTTATCAGTGCCAGCACAATCTCAACTACTGGCGCTTTGGTGACTACATCGGTATTGGCTGCGGCGCACACGGCAAAGTGACCTTCCCGGATGGGCGCATTCTGCGTACCACCAAAACGCGTCATCCGCGTGGTTTTATGCAAGGAAGGTATCTGGAAAGCCAGCGTGATGTCGAAGCCACAGATAAGCCGTTTGAGTTCTTTATGAATCGCTTCCGTCTGCTGGAGGCCGCGCCGCGCGTGGAGTTTATTGCGTATACCGGGCTTTGCGAAGATGTGATTCGCCCACAGTTAGACGAGGCGATTGCCCAGGGTTATCTCACCGAATGTGCGGATTACTGGCAGATAACGGAACATGGGAAGCTGTTTTTAAATTCGCTGCTGGAGCTTTTTCTGGCTGAGTAA", 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"gene_synonym", - "ECK2951" - ], - [ - "gene_synonym", - "EcoGene:EG12704" - ], - [ - "gene_synonym", - "NP_417431.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46142" - ], - [ - "gene_synonym", - "b2956" - ] - ], - "dna_sequence": "GTGAAAAAGCAATGGATTGTTGGCACGGCACTGCTTATGTTGATGACTGGTAATGCCTGGGCAGATGGCGAACCGCCAACTGAAAATATCTTAAAAGATCAATTCAAAAAGCAGTATCACGGCATTCTCAAGCTTGATGCTATCACCTTAAAAAATCTTGATGCTAAGGGTAATCAGGCCACCTGGTCAGCGGAAGGCGATGTCTCTTCCAGTGACGATCTCTATACCTGGGTCGGTCAGTTGGCAGATTACGAACTGCTCGAACAGACCTGGACGAAAGATAAACCGGTAAAATTCTCGGCGATGTTAACCAGTAAAGGAACGCCCGCGTCTGGCTGGTCGGTGAACTTTTACTCTTTTCAGGCGGCAGCCAGCGATCGTGGGCGGGTGGTCGACGATATCAAAACGAATAATAAATATCTGATCGTGAATAGCGAAGATTTCAATTATCGCTTTAGTCAGCTTGAATCTGCGTTGAATACCCAGAAGAACTCGATTCCTGCGCTGGAAAAGGAAGTGAAAGCGCTTGATAAGCAAATGGTGGCGGCGCAGAAAGCAGCGGATGCATATTGGGGAAAAGATGCAAACGGTAAGCAAATGACCCGCGAAGACGCCTTTAAAAAAATTCACCAACAGCGTGATGAGTTTAATAAACAGAACGATAGCGAGGCGTTCGCGGTTAAATATGACAAAGAGGTTTATCAACCGGCGATTGCGGCATGTCATAAACAGAGTGAAGAGTGTTATGAAGTGCCGATTCAGCAGAAACGAGATTTCGATATCAACGAACAACGGCGACAGACTTTTCTGCAATCACAAAAACTTAGCCGTAAATTGCAGGATGACTGGGTAACGCTCGAAAAAGGGCAATATCCGTTAACGATGAAAGTTTCAGAAATAAACAGTAAAAAAGTCGCGATTTTGATGAAAATTGACGATATCAACCAAGCTAATGAACGCTGGAAAAAAGATACCGAACAACTGCGGCGCAATGGGGTGATTAAGTAA", 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"gene_synonym", - "JW2924" - ], - [ - "gene_synonym", - "ASAP:ABE-0009700" - ], - [ - "gene_synonym", - "ansB" - ], - [ - "gene_synonym", - "b2957" - ], - [ - "gene_synonym", - "ECK2952" - ] - ], - "dna_sequence": "ATGGAGTTTTTCAAAAAGACGGCACTTGCCGCACTGGTTATGGGTTTTAGTGGTGCAGCATTGGCATTACCCAATATCACCATTTTAGCAACCGGCGGGACCATTGCCGGTGGTGGTGACTCCGCAACCAAATCTAACTACACAGTGGGTAAAGTTGGCGTAGAAAATCTGGTTAATGCGGTGCCGCAACTAAAAGACATTGCGAACGTTAAAGGCGAGCAGGTAGTGAATATCGGCTCCCAGGACATGAACGATAATGTCTGGCTGACACTGGCGAAAAAAATTAACACCGACTGCGATAAGACCGACGGCTTCGTCATTACCCACGGTACCGACACGATGGAAGAAACTGCTTACTTCCTCGACCTGACGGTGAAATGCGACAAACCGGTGGTGATGGTCGGCGCAATGCGTCCGTCCACGTCTATGAGCGCAGACGGTCCATTCAACCTGTATAACGCGGTAGTGACCGCAGCTGATAAAGCCTCCGCCAACCGTGGCGTGCTGGTAGTGATGAATGACACCGTGCTTGATGGCCGTGACGTCACCAAAACCAACACCACCGACGTAGCGACCTTCAAGTCTGTTAACTACGGTCCTCTGGGTTACATTCACAACGGTAAGATTGACTACCAGCGTACCCCGGCACGTAAGCATACCAGCGACACGCCATTCGATGTCTCTAAGCTGAATGAACTGCCGAAAGTCGGCATTGTTTATAACTACGCTAACGCATCCGATCTTCCGGCTAAAGCACTGGTAGATGCGGGCTATGATGGCATCGTTAGCGCTGGTGTGGGTAACGGCAACCTGTATAAATCTGTGTTCGACACGCTGGCGACCGCCGCGAAAACCGGTACTGCAGTCGTGCGTTCTTCCCGCGTACCGACGGGCGCTACCACTCAGGATGCCGAAGTGGATGATGCGAAATACGGCTTCGTCGCCTCTGGCACGCTGAACCCGCAAAAAGCGCGCGTTCTGCTGCAACTGGCTCTGACGCAAACCAAAGATCCGCAGCAGATCCAGCAGATCTTCAATCAGTACTAA", 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"gene_synonym", - "b2958" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADS9" - ], - [ - "gene_synonym", - "EcoGene:EG12705" - ], - [ - "gene_synonym", - "ASAP:ABE-0009706" - ], - [ - "gene_synonym", - "ECK2953" - ] - ], - "dna_sequence": "ATGATGCGCAAAATGCTGCTGGCGGCAGCACTTTCAGTGACGGCAATGACCGCTCACGCCGACTACCAGTGCAGCGTCACGCCGCGTGACGATGTGATTGTCAGCCCGCAAACCGTGCAGGTGAAGGGCGAAAACGGCAATCTGGTGATCACGCCAGACGGCAACGTGATGTATAACGGTAAGCAATATTCCCTGAATGCCGCCCAGCGCGAGCAGGCGAAGGATTATCAGGCTGAACTACGCAGCACGCTGCCGTGGATTGATGAAGGCGCGAAAAGCCGCGTCGAGAAAGCCCGTATTGCTCTGGATAAAATTATCGTTCAGGAGATGGGCGAAAGCAGCAAAATGCGCAGCCGTCTGACCAAACTTGATGCGCAGCTGAAAGAGCAGATGAACCGCATTATTGAAACGCGCAGCGATGGCCTGACGTTTCACTATAAAGCCATTGATCAGGTTCGCGCCGAAGGCCAGCAATTAGTGAATCAGGCAATGGGTGGAATTTTACAGGACAGCATTAATGAAATGGGCGCGAAAGCGGTGCTGAAAAGCGGCGGTAACCCATTACAGAATGTGCTGGGAAGCCTGGGGGGGCTGCAATCCTCAATCCAAACCGAGTGGAAAAAGCAGGAAAAAGATTTCCAGCAGTTTGGCAAAGATGTTTGTAGCCGCGTTGTGACTCTGGAAGATAGCCGCAAAGCCCTGGTCGGGAATTTAAAATAA", - "dna_sequence_length": 720, - "functions": [ - "DUF2884 family putative periplasmic protein" - ], - "id": "CDS_2913", - "location": [ - [ - "NC_000913", - 3101623, - "-", - 720 - ] - ], - "md5": "004690854f2b5248d69787f8c33aceaf", - "parent_gene": "", - "protein_md5": "1ec15bf8020179e500e9c92c944b4e14", - "protein_translation": "MMRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGENGNLVITPDGNVMYNGKQYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIALDKIIVQEMGESSKMRSRLTKLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLVNQAMGGILQDSINEMGAKAVLKSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGKDVCSRVVTLEDSRKALVGNLK", - "protein_translation_length": 239, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yggL" - ], - [ - "gene_synonym", - "GI:90111519" - ], - [ - "gene_synonym", - "GeneID:947449" - ], - [ - "gene_synonym", - "JW2926" - ], - [ - "gene_synonym", - "b2959" - ], - [ - "gene_synonym", - "NP_417434.4" - ], - [ - "gene_synonym", - "EcoGene:EG12443" - ], - [ - "gene_synonym", - "ECK2954" - ], - [ - "gene_synonym", - "ASAP:ABE-0009712" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38521" - ] - ], - "dna_sequence": "ATGGCAAAGAACCGTAGCCGTCGTCTGCGTAAAAAAATGCACATCGACGAATTCCAGGAATTAGGATTTTCGGTGGCATGGCGATTCCCGGAAGGTACATCGGAAGAACAGATTGATAAAACCGTTGATGATTTTATTAACGAGGTTATCGAACCGAACAAACTGGCCTTTGACGGCAGCGGTTATCTGGCCTGGGAAGGTCTGATCTGCATGCAGGAAATCGGCAAATGCACCGAAGAACATCAGGCGATTGTGCGTAAGTGGCTGGAAGAGCGCAAACTGGATGAGGTACGCACCAGCGAACTTTTCGACGTTTGGTGGGACTAA", - "dna_sequence_length": 327, - "functions": [ - "DUF469 family protein" - ], - "id": "CDS_2914", - "location": [ - [ - "NC_000913", - 3102133, - "-", - 327 - ] - ], - "md5": "658d83375c434dc0196dad12bc041122", - "parent_gene": "", - "protein_md5": "d7dbb589369144842b0aeadbbe674330", - "protein_translation": "MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDDFINEVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSELFDVWWD", - "protein_translation_length": 108, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8I5" - ], - [ - "gene_synonym", - "EcoGene:EG11779" - ], - [ - "gene_synonym", - "yggH" - ], - [ - "gene_synonym", - "ASAP:ABE-0009714" - ], - [ - "gene_synonym", - "GeneID:947448" - ], - [ - "gene_synonym", - "JW2927" - ], - [ - "gene_synonym", - "trmI" - ], - [ - "gene_synonym", - "ECK2955" - ], - [ - "gene_synonym", - "GI:16130861" - ], - [ - "gene_synonym", - "NP_417435.1" - ], - [ - "gene_synonym", - "b2960" - ], - [ - "gene_synonym", - "trmB?" - ] - ], - "dna_sequence": "ATGAAAAACGACGTCATTTCACCGGAATTTGATGAAAACGGCCGCCCACTGCGCCGTATCCGTAGTTTTGTGCGCCGCCAGGGGCGACTGACCAAAGGCCAGGAACATGCGCTGGAAAACTACTGGCCGGTGATGGGCGTTGAGTTCAGCGAAGATATGCTGGATTTCCCCGCGCTTTTTGGCCGTGAAGCGCCGGTGACGCTTGAGATTGGTTTTGGCATGGGGGCGTCGCTGGTGGCAATGGCTAAAGATCGCCCTGAGCAGGACTTCCTCGGCATTGAAGTGCATTCACCGGGCGTTGGTGCGTGCCTGGCTTCTGCGCATGAAGAAGGTTTAAGCAACCTGCGCGTGATGTGTCACGATGCGGTTGAAGTGCTGCATAAAATGATTCCTGACAATTCATTGCGCATGGTGCAGCTCTTTTTCCCTGACCCGTGGCACAAAGCGCGCCATAATAAACGCCGTATCGTTCAGGTGCCGTTTGCCGAACTGGTAAAAAGCAAACTGCAGCTGGGGGGCGTATTCCATATGGCGACCGACTGGGAACCTTATGCGGAACATATGCTTGAAGTGATGTCTTCTATTGACGGTTATAAAAACCTGTCAGAGAGCAATGATTACGTACCGCGTCCGGCATCACGTCCGGTGACGAAATTTGAACAACGTGGTCATCGTCTTGGTCACGGAGTATGGGACTTAATGTTCGAGAGGGTGAAATAA", - "dna_sequence_length": 720, - "functions": [ - "tRNA m(7)G46 methyltransferase, SAM-dependent" - ], - "id": "CDS_2915", - "location": [ - [ - "NC_000913", - 3102852, - "-", - 720 - ] - ], - "md5": "a7b4487e1108177c0da61342f6fdfa3d", - "parent_gene": "", - "protein_md5": "942656c075cbe0d7989ebcf0cc018006", - "protein_translation": "MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPVMGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDLMFERVK", - "protein_translation_length": 239, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "mutB" - ], - [ - "gene_synonym", - "JW2928" - ], - [ - "gene_synonym", - "GeneID:947447" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17802" - ], - [ - "gene_synonym", - "NP_417436.1" - ], - [ - "gene_synonym", - "EcoGene:EG10627" - ], - [ - "gene_synonym", - "ASAP:ABE-0009720" - ], - [ - "gene_synonym", - "GI:16130862" - ], - [ - "gene_synonym", - "ECK2956" - ], - [ - "gene_synonym", - "mutY" - ], - [ - "gene_synonym", - "micA" - ], - [ - "gene_synonym", - "b2961" - ] - ], - "dna_sequence": "ATGCAAGCGTCGCAATTTTCAGCCCAGGTTCTGGACTGGTACGATAAATACGGGCGAAAAACTCTGCCCTGGCAAATTGACAAGACGCCCTACAAAGTATGGCTCTCAGAAGTGATGTTGCAACAAACTCAGGTTGCGACCGTTATCCCCTATTTTGAACGCTTTATGGCGCGCTTCCCGACGGTGACCGATCTCGCCAATGCGCCGCTCGACGAAGTTCTCCACTTGTGGACCGGGCTTGGCTATTACGCCCGCGCGCGCAATCTGCATAAAGCGGCACAACAAGTGGCGACCTTACACGGCGGTAAATTCCCGGAAACCTTTGAGGAAGTTGCAGCACTGCCGGGCGTCGGGCGTTCCACCGCAGGCGCGATTCTCTCGCTTTCTCTGGGTAAGCACTTTCCGATTCTCGACGGTAACGTCAAACGCGTGCTGGCGCGCTGCTATGCTGTAAGCGGCTGGCCTGGGAAAAAAGAGGTCGAGAATAAATTATGGAGTTTGAGCGAGCAGGTGACGCCCGCGGTTGGCGTGGAACGGTTTAATCAGGCGATGATGGATTTGGGTGCGATGATTTGTACGCGCTCGAAACCGAAATGTTCGCTCTGTCCGCTACAAAACGGATGTATTGCCGCCGCCAACAATAGCTGGGCGCTTTATCCGGGCAAAAAACCGAAACAGACGCTGCCGGAGCGCACCGGCTACTTTTTGCTATTACAGCACGAAGATGAAGTATTGCTGGCGCAGCGTCCGCCGAGCGGATTGTGGGGCGGTTTATACTGTTTCCCGCAGTTTGCCGACGAAGAAAGTTTGCGGCAGTGGCTGGCGCAACGGCAGATTGCTGCCGATAACCTGACGCAACTGACCGCGTTTCGGCATACCTTCAGCCATTTCCACTTAGATATTGTGCCTATGTGGCTTCCCGTGTCGTCATTCACCGGCTGCATGGATGAAGGCAATGCGCTCTGGTATAACTTAGCGCAACCGCCGTCAGTTGGCCTAGCGGCTCCCGTGGAGCGTTTGTTACAGCAGTTACGCACTGGCGCGCCGGTTTAG", - "dna_sequence_length": 1053, - "functions": [ - "adenine DNA glycosylase" - ], - "id": "CDS_2916", - "location": [ - [ - "NC_000913", - 3103013, - "+", - 1053 - ] - ], - "md5": "5e3c995f6e0cc4cb325d7f69dc029673", - "parent_gene": "", - "protein_md5": "14cfebc4e74a61eff5be958fc20838ea", - "protein_translation": "MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQVATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGGKFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWALYPGKKPKQTLPERTGYFLLLQHEDEVLLAQRPPSGLWGGLYCFPQFADEESLRQWLAQRQIAADNLTQLTAFRHTFSHFHLDIVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLAAPVERLLQQLRTGAPV", - "protein_translation_length": 350, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8P3" - ], - [ - "gene_synonym", - "JW2929" - ], - [ - "gene_synonym", - "ASAP:ABE-0009722" - ], - [ - "gene_synonym", - "NP_417437.1" - ], - [ - "gene_synonym", - "EcoGene:EG12984" - ], - [ - "gene_synonym", - "yggX" - ], - [ - "gene_synonym", - "GI:16130863" - ], - [ - "gene_synonym", - "ECK2957" - ], - [ - "gene_synonym", - "b2962" - ], - [ - "gene_synonym", - "GeneID:947461" - ] - ], - "dna_sequence": "ATGAGCAGAACGATTTTTTGTACTTTCCTGCAACGTGAAGCAGAAGGTCAGGATTTTCAGCTGTACCCCGGCGAGCTGGGAAAACGCATCTATAACGAGATCTCCAAAGAAGCCTGGGCGCAGTGGCAGCACAAGCAAACCATGCTGATTAATGAAAAGAAACTCAACATGATGAATGCCGAGCACCGCAAGCTGCTTGAGCAGGAGATGGTCAACTTCCTGTTCGAGGGTAAAGAGGTGCATATCGAGGGCTATACGCCGGAAGATAAAAAATAA", - "dna_sequence_length": 276, - "functions": [ - "oxidative damage protective factor for iron-sulfur proteins" - ], - "id": "CDS_2917", - "location": [ - [ - "NC_000913", - 3104093, - "+", - 276 - ] - ], - "md5": "16ba63eff94035c54fb2879dfdba1f59", - "parent_gene": "", - "protein_md5": "d3e155df63b4b26d95a6a761b36e6453", - "protein_translation": "MSRTIFCTFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQHKQTMLINEKKLNMMNAEHRKLLEQEMVNFLFEGKEVHIEGYTPEDKK", - "protein_translation_length": 91, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C066" - ], - [ - "gene_synonym", - "NP_417438.2" - ], - [ - "gene_synonym", - "GI:90111520" - ], - [ - "gene_synonym", - "EcoGene:EG12986" - ], - [ - "gene_synonym", - "GeneID:945428" - ], - [ - "gene_synonym", - "JW5481" - ], - [ - "gene_synonym", - "ECK2958" - ], - [ - "gene_synonym", - "yggZ" - ], - [ - "gene_synonym", - "mltC" - ], - [ - "gene_synonym", - "ASAP:ABE-0009725" - ], - [ - "gene_synonym", - "b2963" - ] - ], - "dna_sequence": "ATGAAAAAATATCTCGCGCTGGCTTTGATTGCGCCGTTGCTCATCTCCTGTTCGACGACCAAAAAAGGCGATACCTATAACGAAGCCTGGGTCAAAGATACCAACGGTTTTGATATTCTGATGGGGCAATTTGCCCACAATATTGAGAACATCTGGGGCTTCAAAGAGGTGGTGATCGCTGGTCCTAAGGACTACGTGAAATACACCGATCAATATCAGACCCGCAGCCACATCAACTTCGATGACGGTACGATTACTATCGAAACCATCGCCGGGACAGAACCTGCCGCGCATTTGCGCCGGGCAATTATCAAAACGTTATTGATGGGTGACGATCCGAGTTCGGTCGATCTCTATTCCGACGTTGATGATATTACGATTTCGAAAGAACCTTTCCTTTACGGTCAGGTGGTGGACAACACCGGGCAGCCGATTCGCTGGGAAGGTCGCGCAAGCAACTTCGCGGATTATCTGCTGAAAAACCGTCTGAAGAGCCGCAGCAACGGGCTGCGTATCATCTACAGCGTCACCATTAACATGGTGCCGAACCACCTTGATAAACGTGCGCACAAATATCTCGGCATGGTCCGCCAGGCGTCACGGAAATATGGCGTTGATGAGTCGCTGATTCTGGCAATTATGCAGACCGAATCTTCCTTTAACCCGTATGCGGTCAGCCGTTCCGATGCGCTGGGATTAATGCAGGTGGTACAACATACTGCCGGGAAAGATGTGTTCCGCTCGCAGGGGAAATCCGGCACGCCGAGCCGCAGTTTCTTGTTTGATCCTGCCAGCAATATTGATACCGGCACCGCGTATCTGGCGATGCTGAACAATGTTTATCTCGGCGGAATTGATAACCCAACATCGCGGCGTTATGCCGTCATCACCGCCTATAACGGCGGCGCAGGCAGCGTGCTGCGAGTCTTTTCGAATGATAAGATTCAGGCTGCCAATATTATTAACACCATGACGCCGGGCGATGTTTATCAGACGCTGACGACCCGCCATCCCTCTGCGGAATCTCGCCGTTATCTTTATAAAGTGAATACCGCGCAAAAATCCTACCGCCGCCGATAA", 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"UniProtKB/Swiss-Prot:P0AFF4" - ], - [ - "gene_synonym", - "ECK2959" - ], - [ - "gene_synonym", - "ASAP:ABE-0009728" - ], - [ - "gene_synonym", - "nupG" - ], - [ - "gene_synonym", - "b2964" - ], - [ - "gene_synonym", - "GeneID:946282" - ] - ], - "dna_sequence": "ATGAATCTTAAGCTGCAGCTGAAAATCCTCTCTTTTCTGCAGTTCTGTCTGTGGGGAAGTTGGCTGACGACCCTCGGCTCCTATATGTTTGTTACCCTGAAGTTTGACGGTGCTTCTATTGGCGCAGTTTATAGCTCACTGGGTATCGCAGCGGTCTTTATGCCTGCGCTGCTGGGGATTGTGGCCGACAAATGGTTAAGTGCGAAATGGGTATATGCCATTTGCCACACCATTGGCGCTATCACGCTGTTCATGGCGGCACAGGTCACGACACCGGAAGCGATGTTCCTTGTGATATTGATTAACTCGTTTGCTTATATGCCAACGCTTGGGTTAATCAACACCATCTCTTACTATCGCCTGCAAAATGCCGGGATGGATATCGTTACTGACTTCCCGCCAATCCGTATCTGGGGCACCATCGGCTTTATCATGGCAATGTGGGTGGTGAGCCTGTCTGGCTTCGAATTAAGCCACATGCAGCTGTATATTGGCGCAGCACTTTCCGCCATTCTGGTTCTGTTTACCCTGACTCTGCCGCATATTCCGGTTGCTAAACAGCAAGCGAATCAGAGCTGGACAACCCTGCTGGGCCTCGATGCATTCGCGCTGTTTAAAAACAAGCGTATGGCAATCTTCTTTATCTTCTCAATGCTGCTGGGCGCGGAACTGCAGATTACCAACATGTTCGGTAATACCTTCCTGCACAGCTTCGACAAAGATCCGATGTTTGCCAGCAGCTTTATTGTGCAGCATGCGTCAATCATCATGTCGATTTCGCAGATCTCTGAAACCCTGTTCATTCTGACCATCCCGTTCTTCTTAAGCCGCTACGGTATTAAGAACGTAATGATGATCAGTATTGTGGCGTGGATCCTGCGTTTTGCGCTGTTTGCTTACGGCGACCCGACTCCGTTCGGTACTGTACTGCTGGTACTGTCGATGATCGTTTACGGTTGCGCATTCGACTTCTTCAACATCTCTGGTTCGGTGTTTGTCGAAAAAGAAGTTAGCCCGGCAATTCGCGCCAGTGCACAAGGGATGTTCCTGATGATGACTAACGGCTTCGGCTGTATCCTCGGCGGCATCGTGAGCGGTAAAGTTGTTGAGATGTACACCCAAAACGGCATTACCGACTGGCAGACCGTATGGTTGATTTTCGCTGGTTACTCCGTGGTTCTGGCCTTCGCGTTCATGGCGATGTTCAAATATAAACACGTTCGTGTCCCGACAGGCACACAGACGGTTAGCCACTAA", 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"gene_synonym", - "JW5482" - ], - [ - "gene_synonym", - "NP_417440.4" - ], - [ - "gene_synonym", - "ECK2960" - ], - [ - "gene_synonym", - "b2965" - ], - [ - "gene_synonym", - "speC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21169" - ] - ], - "dna_sequence": "ATGAAATCAATGAATATTGCCGCCAGTAGTGAACTGGTATCCCGACTTTCTTCTCATCGTCGCGTGGTGGCGTTGGGAGATACTGATTTTACGGACGTCGCGGCAGTCGTCATTACCGCTGCGGATAGTCGCAGTGGCATTCTTGCGTTGCTTAAGCGCACCGGTTTTCATCTACCGGTGTTTTTGTATTCCGAACATGCTGTTGAATTACCTGCGGGCGTTACGGCGGTAATCAACGGCAACGAGCAGCAGTGGCTGGAGCTGGAATCCGCAGCCTGTCAGTATGAAGAGAATTTGCTGCCACCGTTTTATGACACGCTGACGCAGTACGTTGAGATGGGCAACAGCACCTTTGCTTGCCCTGGACATCAACATGGTGCGTTTTTTAAAAAGCATCCTGCCGGACGCCATTTTTACGATTTCTTTGGTGAGAACGTCTTTCGCGCCGATATGTGTAACGCTGACGTAAAATTGGGCGATCTGCTTATTCATGAAGGATCGGCGAAAGATGCGCAGAAATTCGCAGCCAAAGTCTTTCATGCCGATAAAACCTATTTTGTGCTGAACGGCACATCGGCAGCGAATAAAGTGGTGACGAATGCGCTGTTAACGCGTGGCGATCTGGTGCTCTTCGACCGTAACAACCATAAGTCGAATCATCACGGCGCGCTGATTCAGGCGGGGGCGACGCCGGTCTATCTGGAAGCTTCACGCAACCCGTTTGGTTTCATTGGCGGTATTGATGCGCACTGTTTTAATGAAGAGTATCTGCGCCAGCAAATTCGCGACGTTGCGCCAGAAAAAGCCGACCTGCCGCGCCCGTATCGCCTGGCGATTATTCAGCTGGGAACCTATGACGGCACTGTCTATAACGCCCGTCAGGTGATCGATACCGTTGGGCATCTGTGTGATTACATTCTGTTTGATTCCGCGTGGGTCGGTTATGAACAATTTATCCCGATGATGGCGGATAGCTCGCCGCTGCTGTTAGAACTTAACGAAAACGATCCGGGGATCTTTGTGACTCAGTCGGTGCACAAACAGCAGGCGGGATTCTCACAGACGTCGCAGATCCATAAAAAAGATAACCATATCCGCGGACAGGCGCGTTTTTGCCCGCATAAGCGGTTGAATAACGCCTTTATGCTCCATGCTTCTACCAGCCCTTTCTATCCGCTGTTTGCTGCACTGGATGTTAACGCCAAAATTCATGAAGGGGAGAGTGGGCGTCGGCTGTGGGCTGAGTGTGTTGAGATAGGGATTGAAGCGCGCAAGGCTATTCTTGCGCGCTGTAAGCTGTTCCGCCCGTTTATCCCGCCCGTTGTTGATGGCAAATTGTGGCAGGATTATCCGACATCAGTGTTAGCCAGCGACCGCCGTTTTTTCAGTTTTGAGCCGGGGGCGAAGTGGCACGGCTTTGAAGGATATGCCGCGGATCAGTATTTTGTTGATCCGTGCAAGCTGTTACTCACTACACCAGGTATCGATGCCGAAACCGGCGAATATAGCGACTTTGGCGTTCCGGCGACGATTCTGGCGCACTATCTGCGTGAGAACGGCATTGTGCCGGAGAAGTGCGATCTCAACTCCATTCTGTTTTTATTAACTCCGGCGGAAAGCCACGAGAAGCTGGCACAACTGGTGGCGATGCTGGCGCAATTTGAACAGCATATTGAGGATGACTCGCCGCTGGTTGAGGTGTTGCCGAGCGTTTATAACAAGTATCCGGTGCGCTATCGCGACTACACCCTGCGCCAGTTGTGTCAGGAGATGCACGATCTGTATGTCAGTTTCGACGTCAAAGACCTACAAAAAGCGATGTTCCGCCAGCAGAGTTTCCCGTCAGTGGTGATGAACCCCCAGGATGCGCATAGCGCTTATATTCGCGGTGACGTGGAGTTGGTGCGGATTCGTGATGCCGAAGGGCGAATTGCGGCAGAAGGGGCGTTGCCTTATCCACCTGGCGTGCTTTGCGTGGTACCCGGGGAAGTCTGGGGTGGGGCGGTTCAACGTTATTTCCTTGCACTGGAAGAAGGGGTGAATTTGTTGCCGGGATTTTCGCCGGAGCTGCAAGGTGTTTATAGCGAAACCGATGCGGATGGCGTGAAACGGTTGTACGGTTATGTGTTGAAGTAA", 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"MKSMNIAASSELVSRLSSHRRVVALGDTDFTDVAAVVITAADSRSGILALLKRTGFHLPVFLYSEHAVELPAGVTAVINGNEQQWLELESAACQYEENLLPPFYDTLTQYVEMGNSTFACPGHQHGAFFKKHPAGRHFYDFFGENVFRADMCNADVKLGDLLIHEGSAKDAQKFAAKVFHADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEASRNPFGFIGGIDAHCFNEEYLRQQIRDVAPEKADLPRPYRLAIIQLGTYDGTVYNARQVIDTVGHLCDYILFDSAWVGYEQFIPMMADSSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVEIGIEARKAILARCKLFRPFIPPVVDGKLWQDYPTSVLASDRRFFSFEPGAKWHGFEGYAADQYFVDPCKLLLTTPGIDAETGEYSDFGVPATILAHYLRENGIVPEKCDLNSILFLLTPAESHEKLAQLVAMLAQFEQHIEDDSPLVEVLPSVYNKYPVRYRDYTLRQLCQEMHDLYVSFDVKDLQKAMFRQQSFPSVVMNPQDAHSAYIRGDVELVRIRDAEGRIAAEGALPYPPGVLCVVPGEVWGGAVQRYFLALEEGVNLLPGFSPELQGVYSETDADGVKRLYGYVLK", - "protein_translation_length": 711, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009736" - ], - [ - "gene_synonym", - "EcoGene:EG12987" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46831" - ], - [ - "gene_synonym", - "JW2934" - ], - [ - "gene_synonym", - "GeneID:947462" - ], - [ - "gene_synonym", - "NP_417441.1" - ], - [ - "gene_synonym", - "ECK2961" - ], - [ - "gene_synonym", - "b2966" - ], - [ - "gene_synonym", - "GI:16130867" - ], - [ - "gene_synonym", - "yqgA" - ] - ], - "dna_sequence": "GTGGTCATCGGCCCTTTTATCAACGCTAGTGCAGTCTTACTGGGTGGCGTTCTCGGCGCACTGCTCAGCCAACGCTTACCGGAACGTATCCGCGTCTCCATGACATCAATTTTTGGTCTGGCATCGCTGGGGATTGGTATTTTACTGGTGGTGAAATGTGCCAACCTTCCAGCGATGGTTTTAGCTACGCTACTTGGCGCTCTAATTGGCGAAATTTGTTTGCTGGAGAAAGGTGTCAATACAGCAGTCGCCAAAGCACAAAATCTGTTTCGTCACTCACGTAAGAAGCCAGCGCATGAATCTTTTATTCAGAATTATGTCGCGATTATTGTCCTGTTTTGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAATCGCCAAGTCATTTCTTGATTTCTTTACGGCGATGATCTTCGCCTGCTCGCTGGGTATTGCGGTATCGGTGATTAGTATCCCATTACTGATCATCCAGTTAACGCTGGCGTGGGCTGCCGCGCTGATTTTACCGCTGACCACACCGTCGATGATGGCAGACTTCAGCGCCGTAGGCGGTTTATTGCTGCTGGCAACCGGATTACGCATCTGTGGCATTAAAATGTTCCCGGTGGTCAACATGCTTCCAGCACTCCTTCTGGCAATGCCGCTTTCCGCCGCCTGGACCGCCTGGTTTGCCTGA", - "dna_sequence_length": 708, 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"gene_synonym", - "gspMbeta" - ], - [ - "gene_synonym", - "ECK2963" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46832" - ] - ], - "dna_sequence": "ATGTTACGCGATAAATTTATTCACTATTTTCAGCAATGGCGTGAACGCCAGTTAAGCCGTGGCGAACACTGGCTGGCACAACACCTGGCGGGGCGTTCTCCGCGTGAAAAGGGCATGTTACTGGCAGCGGTGGTGTTCCTGTTTAGCGTCGGATATTACGTCCTCATCTGGCAGCCGTTGAGCGAACGGATTGAGCAACAGGAGACAATATTGCAGCAGCTGGTGGCGATGAACACCCGACTGAAGAACGCCGCGCCGGATATTATTGCAGCGCGAAAATCTGCCACAACAACGCCTGCGCAGGTATCGCGGGTCATCAGTGACAGTGCTTCCGCGCACTCGGTGGTCATCAGGCGGATAGCCGATCGTGGGGAGAATATTCAGGTCTGGATAGAACCTGTGGTGTTTAATGACCTGCTGAAATGGTTAAACGCACTGGATGAAAAATATGCGCTGCGGGTGACACAAATTGATGTCAGTGCTGCTGAGAAGCCTGGGATGGTGAATGTGCAGCGGCTGGAGTTTGGACGGGGGTAA", - "dna_sequence_length": 537, - "functions": [ - "putative membrane-anchored secretion pathway M-type protein" - ], - "id": "CDS_2922", - "location": [ - [ - "NC_000913", - 3111126, - "-", - 537 - ] - ], - "md5": "978f5b02d09abbc9148d8093d8816c30", - "parent_gene": "", - "protein_md5": "f0c181abf863ce639abb61b92fa14a8b", - "protein_translation": "MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAVVFLFSVGYYVLIWQPLSERIEQQETILQQLVAMNTRLKNAAPDIIAARKSATTTPAQVSRVISDSASAHSVVIRRIADRGENIQVWIEPVVFNDLLKWLNALDEKYALRVTQIDVSAAEKPGMVNVQRLEFGRG", - "protein_translation_length": 178, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ecfB" - ], - [ - "gene_synonym", - "EcoGene:EG12989" - ], - [ - "gene_synonym", - "yghE" - ], - [ - "gene_synonym", - "ASAP:ABE-0009742" - ], - [ - "gene_synonym", - "GeneID:945897" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46833" - ], - [ - "gene_synonym", - "JW5924" - ], - [ - "gene_synonym", - "b2969" - ], - [ - "gene_synonym", - "gspLbeta" - ], - [ - "gene_synonym", - "ECK2964" - ] - ], - "dna_sequence": "CCGACTATTCTGCCCGCCTTACTGGAAGAAGAGCTGAACCAGGATATCGATGAACTGCATTTCGCCCCGTTGAATATCGACCAGCAACTGGCAACCGTAGCAGTGATTCACCAACAGCATATGCGCAACATTGCGCAGTGGTTGCAGGAAAACGGCATCACCCGCGCTACCGTCGCGCCGGACTGGATGTCCATTCCTTGTGGGTTTATGGCTTGCGATGCGCAACGGGTTATCTGCCGCATCGATGAATGCCGGGGATGGAGCGCCGGGCTGGCGCTGGCTCCGGTCATGTTCCGCGCCCAGCTCAATGAGCAGGATTTACCGCTTTCGCTAACCGTAGTCGGCATTGCACCGGAAAAGCTATCAGCATGGGCTGGCGCAGACGCTGAACGCCTGACCGTTACAGCTCTGCCCGCCATTACCACTTATGGCGAACCGGAAGGGAACCTGCTGACAGGGCCGTGGCAGCCTCGCGTCAGCTACCGAAAACAGTGGGCGCGCTGGCGGGTGATGATTCTGCCGATATTGCTGATTCTGGTTGCGCTGGCAGTGGAGCGGGGCGTGACGTTATGGAGCGTCAGCGAACAGGTGGCGCAAAGCCGCACCCAGGCGGAGGAACAGTTCTTAACGTTGTTCCCGGAGCAGAAGCGGATTGTGAATTTACGCTCTCAGGTGACGATGGCGCTGAAAAAATATCGCCCACAGGCCGACGATACCCGGCTGCTCGCCGAGTTGTCAGCGATAGCCAGCACCCTGAAATCAGCGTCACTTTCCGACATCGAAATGCGTGGTTTTACCTTTGATCAAAAACGCCAGATACTTCACCTCCAGCTACGGGCCGCGAACTTTGCCAGTTTCGACAAACTGCGTAGTGTACTGGCAACCGATTATGTTGTGCAACAGGACGCGTTACAGAAAGAGGGTGATGCGGTTTCCGGCGGCGTAACGTTGCGGAGGAAATAA", - "dna_sequence_length": 963, - "id": "CDS_2923", - "location": [ - [ - "NC_000913", - 3112090, - "-", - 963 - ] - ], - "md5": "0ee85fa70bd0dc58cd470f9880b05134", - "parent_gene": "", - "protein_md5": "aba7236247a326d462ab8fb45fd34801", - "protein_translation": "PTILPALLEEELNQDIDELHFAPLNIDQQLATVAVIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGFMACDAQRVICRIDECRGWSAGLALAPVMFRAQLNEQDLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAITTYGEPEGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALAVERGVTLWSVSEQVAQSRTQAEEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEMRGFTFDQKRQILHLQLRAANFASFDKLRSVLATDYVVQQDALQKEGDAVSGGVTLRRK", - "protein_translation_length": 320, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009745" - ], - [ - "gene_synonym", - "ecfA" - ], - [ - "gene_synonym", - "yghF" - ], - [ - "gene_synonym", - "EcoGene:EG12990" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46834" - ], - [ - "gene_synonym", - "JW5484" - ], - [ - "gene_synonym", - "GeneID:947469" - ], - [ - "gene_synonym", - "ECK2965" - ], - [ - "gene_synonym", - "b2970" - ], - [ - "gene_synonym", - "gspCbeta" - ] - ], - "dna_sequence": "CTGCGAAAAATTGCACGCGGGATGTTCTGGCTGATGCTGCTTATTATTTCTGCAAAAATGGCGCATTCACTCTGGCGCTATATCTCCTTTTCTGCGGAATATACGGCGGTTTCTCAACCGGTGAATAAACCGAGCCGTGTGGATGCAAAAACGTTCGATAAAAATGACGTGCAATTAATCAGCCAGCAAAACTGGTTTGGCAAATATCAGCCTGTCGCCGCGCAGGTAAAACAACCCGAACCTGTGCCTGTGGCAGAAACGCGTCTTAATGTGGTGCTGCGTGGGATCGCCTTTGGTGCCAGACCCGGCGCGGTTATTGAAGAAGGCGGTAAACAGCAGGTCTATTTGCAGGGTGAAACGCTTGGCTCTCACAACGCGGTGATTGAGGAAATCAACCGCGACCATGTGATGCTGCGTTATCAGGGAAAAATAGAGCGTCTGAGTCTGGCAGAAGAGGAACGTTCCACTGTTGCTGTGACCAACAAAAAAGCCGTCAGTGACGAAGCAAAGCAAGCTGTTGCTGAGCCTGCTGTCAGTGTGCCAGTTGAGATCCCGGCTGCCGTGCGTCAGGCACTGGCGAAAGATCCGCAGAAAATTTTTAACTATATCCAGCTTACGCCTGTGCGTAAGGAGGGGATTGTCGGTTATGCAGCGAAGCCGGGGGCAGATCGTTCTCTGTTCGATGCCAGCGGTTTCAAGGAAGGCGATATCGCCATTGCGCTAAATCAGCAGGATTTCACTGATCCACGAGCAATGATTGCTCTGATGCGGCAGTTACCTTCAATGGATTCCATTCAACTTACGGTTTTACGCAAGGGTGCGCGCCACGACATTTCCATCGCGCTGCGC", - "dna_sequence_length": 849, - "id": "CDS_2924", - "location": [ - [ - "NC_000913", - 3112941, - "-", - 849 - ] - ], - "md5": "35385842a38f3e48ab2fb1812bd910e3", - "parent_gene": "", - "protein_md5": "729cc976c16e12423c0846046ce1b533", - "protein_translation": "LRKIARGMFWLMLLIISAKMAHSLWRYISFSAEYTAVSQPVNKPSRVDAKTFDKNDVQLISQQNWFGKYQPVAAQVKQPEPVPVAETRLNVVLRGIAFGARPGAVIEEGGKQQVYLQGETLGSHNAVIEEINRDHVMLRYQGKIERLSLAEEERSTVAVTNKKAVSDEAKQAVAEPAVSVPVEIPAAVRQALAKDPQKIFNYIQLTPVRKEGIVGYAAKPGADRSLFDASGFKEGDIAIALNQQDFTDPRAMIALMRQLPSMDSIQLTVLRKGARHDISIALR", - "protein_translation_length": 283, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2938" - ], - [ - "gene_synonym", - "GI:16130871" - ], - [ - "gene_synonym", - "yghG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46835" - ], - [ - "gene_synonym", - "b2971" - ], - [ - "gene_synonym", - "ASAP:ABE-0009748" - ], - [ - "gene_synonym", - "gspSbeta" - ], - [ - "gene_synonym", - "EcoGene:EG12991" - ], - [ - "gene_synonym", - "GeneID:947470" - ], - [ - "gene_synonym", - "NP_417445.1" - ], - [ - "gene_synonym", - "ECK2966" - ] - ], - "dna_sequence": "ATGTCGATAAAACAAATGCCAGGGAGGGTATTAATATCGCTATTGTTGAGCGTTACAGGATTATTAAGTGGCTGTGCCAGCCATAATGAAAATGCCAGTTTACTGGCGAAAAAACAGGCGCAAAATATCAGCCAAAACCTGCCGATTAAATCTGCGGGATATACCTTAGTGCTGGCGCAAAGTAGCGGCACAACGGTAAAAATGACCATTATCAGCGAAGCGGGTACACAAACCACGCAGACGCCTGACGCCTTTTTAACCAGCTATCAACGACAAATGTGCGCTGACCCGACGGTGAAATTAATGATCACTGAGGGAATTAATTACAGCATAACGATTAATGATACACGTACAGGTAACCAGTATCAGCGGAAACTGGATCGTACCACCTGTGGAATAGTCAAAGCATAA", - "dna_sequence_length": 411, - "functions": [ - "secretin (GspDbeta) OM localization lipoprotein pilotin" - ], - "id": "CDS_2925", - "location": [ - [ - "NC_000913", - 3113477, - "-", - 411 - ] - ], - "md5": "aceff67f9d81402a5e9814bfda4941ec", - "parent_gene": "", - "protein_md5": "784466b225deb9637506eebf4ec17ac6", - "protein_translation": "MSIKQMPGRVLISLLLSVTGLLSGCASHNENASLLAKKQAQNISQNLPIKSAGYTLVLAQSSGTTVKMTIISEAGTQTTQTPDAFLTSYQRQMCADPTVKLMITEGINYSITINDTRTGNQYQRKLDRTTCGIVKA", - "protein_translation_length": 136, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2939" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46836" - ], - [ - "gene_synonym", - "ASAP:ABE-0009751" - ], - [ - "gene_synonym", - "yghH" - ], - [ - "gene_synonym", - "EcoGene:EG12992" - ], - [ - "gene_synonym", - "GI:90111523" - ], - [ - "gene_synonym", - "NP_417446.4" - ], - [ - "gene_synonym", - "pppA" - ], - [ - "gene_synonym", - "GeneID:947467" - ], - [ - "gene_synonym", - "ECK2967" - ], - [ - "gene_synonym", - "b2972" - ] - ], - "dna_sequence": "ATGCTTTTTGATGTTTTTCAGCAATACCCCACGGCGATGCCCGTCCTGGCAACCGTCGGAGGATTGATCATCGGCAGTTTTTTGAATGTGGTGATTTGGCGTTACCCAATCATGCTGCGCCAACAAATGGCGGAGTTTCACGGTGAAATGTCGAGTGCGCAGTCAAAAATAAGCCTTGCGCTACCGCGTTCGCACTGCCCACATTGTCAGCAGACCATCCGGATACGTGACAATATTCCGCTGTTCTCCTGGCTGATGCTCAAAGGGCGCTGCCGCGACTGTCAGGCGAAAATCAGCAAGCGTTATCCGCTGGTGGAGTTATTGACAGCACTTGCTTTTTTGCTGGCGAGTCTGGTCTGGCCAGAAAGTGGATGGGGGCTGGCGGTGATGATATTATCCGCCTGGCTGATTGCCGCGAGTGTCATCGACCTCGATCACCAATGGCTGCCCGATGTTTTTACTCAGGGCGTATTGTGGACAGGACTGATTGCGGCATGGGCGCAGCAGAGTCCGCTCACGCTACAAGATGCAGTCACCGGCGTCCTGGTGGGATTTATCACTTTTTACTCTCTGCGTTGGATAGCCGGAATAGTTCTGCGTAAAGAAGCATTAGGCATGGGCGATGTATTACTTTTCGCCGCGTTAGGTGGCTGGGTGGGGGCATTGTCGCTGCCCAATGTTGCTTTAATCGCCTCATGCTGCGGCCTGATATATGCCGTTATTACAAAAAGAGGATCAACCACACTGCCTTTTGGACCGTGTTTAAGTCTGGGCGGTATAGCAACACTTTATCTACAGGCATTGTTTTAA", - "dna_sequence_length": 810, - "functions": [ - "bifunctional prepilin leader peptidase/ methylase" - ], - "id": "CDS_2926", - "location": [ - [ - "NC_000913", - 3114352, - "-", - 810 - ] - ], - "md5": "388dcdca2da6522fd938f402257ddc0a", - "parent_gene": "", - "protein_md5": "f3e594435d0217a3baca64cbe89537e0", - "protein_translation": "MLFDVFQQYPTAMPVLATVGGLIIGSFLNVVIWRYPIMLRQQMAEFHGEMSSAQSKISLALPRSHCPHCQQTIRIRDNIPLFSWLMLKGRCRDCQAKISKRYPLVELLTALAFLLASLVWPESGWGLAVMILSAWLIAASVIDLDHQWLPDVFTQGVLWTGLIAAWAQQSPLTLQDAVTGVLVGFITFYSLRWIAGIVLRKEALGMGDVLLFAALGGWVGALSLPNVALIASCCGLIYAVITKRGSTTLPFGPCLSLGGIATLYLQALF", - "protein_translation_length": 269, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4466" - ], - [ - "gene_synonym", - "GeneID:2847716" - ], - [ - "gene_synonym", - "ASAP:ABE-0174096" - ], - [ - "gene_synonym", - "yghJ" - ], - [ - "gene_synonym", - "EcoGene:EG12994" - ], - [ - "gene_synonym", - "JW5925" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CK95" - ], - [ - "gene_synonym", - "ECK2968" - ], - [ - "gene_synonym", - "acfD" - ], - [ - "gene_synonym", - "YP_026189.1" - ], - [ - "gene_synonym", - "sslE" - ], - [ - "gene_synonym", - "GI:49176293" - ] - ], - "dna_sequence": "ATGAATAAGAAATTTAAATATAAGAAATCGCTTTTAGCGGCTATTTTGAGCGCAACCCTGTTAGCCGGTTGTGATGGCGGTGGTTCCGGATCTTCCTCCGATACGCCGCCTGTAGATTCTGGAACAGGGTCTTTGCCGGAAGTGAAACCTGATCCAACACCAAACCCGGAGCCGACGCCTGAGCCAACGCCGGACCCAGAGCCTACGCCAGAACCGATACCTGATCCTGAACCAACACCAGAACCGGAGCCAGAACCTGTTCCTACGAAAACGGGTTATCTGACCCTGGGCGGAAGCCAGCGGGTAACTGGTGCTACCTGTAATGGTGAATCCAGCGATGGCTTTACATTTAAACCTGGCGAGGACGTTACTTGCGTGGCGGGTAACACGACAATTGCCACCTTCAACACTCAGTCAGAAGCTGCGCGTAGCTTGCGTGCGGTTGAAAAAGTGTCGTTTAGCCTTGAGGACGCGCAAGAACTGGCGGGCTCCGATGACAAGAAAAGCAATGCGGTTTCGCTGGTAACGTCCAGTAACAGCTGTCCGGCGAATACAGAACAGGTTTGTCTGACGTTCTCCTCGGTGATCGAGAGTAAACGCTTCGACTCGCTGTATAAGCAAATCGATCTGGCACCGGAAGAGTTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATGCTGCGACCGATAAAGCGCCATCCACTCATACTTCACCGGTCGTGCCCGTCACCACGCCGGGAACAAAACCGGATCTGAACGCTTCCTTCGTGTCGGCTAACGCGGAACAGTTTTATCAGTATCAACCCACTGAAATCATTCTCTCTGAAGGTCGACTGGTCGATAGCCAGGGATATGGTGTTGCTGGCGTCAACTACTACACCAATTCAGGCCGTGGCGTGACAGGGGAAAATGGTGAATTTTCCTTTAGCTGGGGCGAAACCATCTCCTTTGGTATCGATACCTTTGAACTGGGTTCAGTGCGCGGCAATAAGTCGACCATTGCGCTGACTGAACTGGGTGATGAAGTTCGCGGGGCGAATATTGATCAGCTTATTCATCGCTATTCGACGACCGGGCAAAATAATACCCGTGTTGTTCCGGACGATGTACGCAAGGTCTTTGCCGAATATCCCAACGTGATCAACGAGATTATCAATCTCTCGTTATCCAACGGTGCGACGCTGGGGGAAGGTGAGCAAGTCGTTAATCTGCCTAACGAATTTATTGAGCAGTTTAATACGGGTCAGGCCAAAGAGATCGATACCGCGATTTGTGCGAAAACCGATGGTTGTAACGAGGCTCGCTGGTTCTCGCTGACGACGCGCAATGTTAATGACGGCCAGATTCAGGGCGTTATCAACAAGCTGTGGGGCGTGGATACGAACTACAAATCTGTCAGCAAGTTCCATGTATTCCATGACTCCACCAACTTCTATGGCAGCACGGGTAATGCGCGCGGTCAGGCGGTGGTGAATATCTCCAACGCGGCCTTCCCGATTCTGATGGCGCGTAATGATAAAAACTACTGGCTGGCCTTCGGCGAAAAACGCGCCTGGGATAAAAACGAGCTGGCGTACATTACGGAAGCGCCTTCTCTTGTTGAGCCGGAAAACGTTACGCGCGATACCGCCACCTTTAACCTGCCGTTTATTTCGCTGGGGCAAGTCGGTGAGGGCAAACTGATGGTTATCGGTAACCCACACTACAACAGCATTTTGCGTTGCCCGAACGGTTACAGCTGGAACGGGGGCGTTAATAAAGATGGGCAGTGTACGCTCAACAGCGACCCGGATGACATGAAGAACTTCATGGAGAACGTGCTGCGCTATCTGTCCGACGATAAATGGAAGCCGGACGCGAAAGCCAGCATGACCGTAGGCACCAACCTGGATACTGTCTATTTTAAACGTCATGGTCAGGTTACAGGAAACAGCGCTGCGTTCGACTTCCATCCGGATTTTGCGGGCATCTCTGTTGAGCATTTAAGTAGCTATGGCGATCTCGATCCGCAGGAAATGCCGCTGCTGATCCTTAACGGCTTTGAATATGTGACTCAGGTGGGTAACGATCCTTATGCAATCCCGCTGCGTGCAGATACCAGCAAACCGAAGCTGACTCAGCAGGATGTGACCGATCTGATCGCCTATCTGAACAAAGGTGGATCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAAGAGAGCGCGTCTGGTTTTGTGCGTCTGTTGGATGCCGCAGGTCTGTCGATGGCACTGAACAAGTCGGTAGTAAATAACGATCCGCAAGGGTATCCGAACCGCGTTCGTCAGCAGCGCGCAACGGGCATTTGGGTCTATGAACGTTATCCTGCCGTAGATGGTGCGCTGCCGTACACCATCGATAGTAAGACAGGGGAAGTTAAGTGGAAATATCAGGTAGAAAACAAACCTGATGACAAACCGAAGCTGGAAGTTGCCAGCTGGCTGGAAGATGTAGATGGCAAACAGGAAACGCGTTATGCCTTTATTGATGAGGCCGATCATAAAACAGAGGATTCTCTGAAGGCTGCGAAGGAGAAAATTTTCGCCGCGTTCCCGGGGCTGAAAGAGTGTACTAATCCGGCATATCACTATGAGGTCAACTGCCTGGAATATCGTCCTGGCACGGGGGTTCCGGTTACTGGTGGCATGTATGTTCCACAGTATACGCAACTAAGCCTTAACGCCGACACTGCAAAAGCGATGGTGCAGGCTGCGGATTTAGGCACCAACATTCAGCGTCTGTATCAGCATGAGCTCTACTTCCGGACCAATGGTCGCAAAGGTGAGCGTCTGAGCAGCGTCGATCTGGAACGTCTGTACCAGAACATGTCGGTCTGGCTGTGGAACGATACGAGCTATCGTTATGAAGAAGGCAAAAATGACGAGCTGGGCTTTAAAACGTTCACCGAGTTCCTGAACTGCTACGCCAATGATGCCTATGCAGGCGGCACCAAGTGTTCTGCAGATCTGAAAAAATCGCTGGTCGATAACAACATGATCTACGGTGACGGTAGCAGCAAAGCGGGCATGATGAACCCGAGCTACCCGCTCAACTATATGGAAAAACCGCTGACACGCCTGATGCTGGGCCGTTCCTGGTGGGATCTGAACATCAAAGTTGATGTCGAGAAGTATCCGGGAGCAGTATCGGAAGAGGGACAGAACGTTACTGAAACCATCAGCCTGTACTCGAATCCGACCAAATGGTTTGCAGGTAACATGCAGTCAACTGGCCTGTGGGCACCGGCTCAGAAAGAGGTCACCATTAAGTCCAATGCGAACGTTCCTGTGACCGTCACCGTGGCGCTGGCTGACGACCTGACCGGACGTGAGAAGCATGAAGTTGCGCTGAACCGTCCGCCAAGAGTGACTAAAACGTACTCTCTGGACGCTAGCGGTACGGTGAAGTTCAAGGTGCCTTACGGTGGCCTGATTTATATCAAGGGCAATAGCTCTACCAATGAATCTGCCAGCTTCACCTTTACTGGCGTGGTAAAAGCACCGTTCTATAAAGACGGCGCATGGAAAAACGATCTGAACTCACCGGCTCCGCTGGGTGAGCTGGAATCAGACGCTTTCGTCTATACCACACCGAAGAAGAACCTGAATGCCAGCAATTACACTGGCGGACTGGAGCAATTCGCTAACGATCTGGATACCTTTGCCAGCTCGATGAATGACTTCTACGGCCGTGATAGCGAAGACGGTAAGCACCGGATGTTTACCTATAAAAACTTGCCGGGCCACAAACATCGTTTCACCAACGATGTGCAGATCTCCATCGGTGATGCGCATTCGGGTTATCCGGTAATGAACAGCAGCTTCTCGCCGAACAGCACCACGCTGCCGACGACGCCGCTGAACGACTGGCTGATCTGGCATGAAGTCGGTCATAACGCCGCAGAAACGCCGTTGACTGTACCGGGTGCAACTGAAGTCGCTAACAACGTGCTGGCGCTGTACATGCAGGATCGTTATCTCGGCAAGATGAACCGTGTCGCTGACGATATTACCGTCGCACCGGAATATCTGGAGGAGAGCAACAACCAGGCATGGGCACGCGGCGGTGCGGGTGACCGTCTGCTGATGTACGCACAGCTGAAGGAATGGGCAGAGAAAAACTTTGATATCAAGAAATGGTATCCAGATGGCACTCCTCTGCCAGAGTTTTACAGCGAGCGTGAAGGGATGAAAGGCTGGAACCTGTTCCAGTTGATGCATCGTAAAGCACGCGGCGATGAGGTCAGCAATGACAAGTTTGGCGGCAAGAATTACTGTGCTGAATCCAACGGTAACGCAGCGGACACGCTGATGCTGTGTGCCTCCTGGGTCGCCCAGACGGATCTTTCGGAGTTCTTTAAGAAATGGAATCCGGGCGCGAATGCTTACCAGCTGCCGGGGGCGAGCGAGATGAGCTTCGAGGGCGGTGTGAGCCAGTCGGCTTACAACACGCTCGCGTCACTCGATCTGCCGAAACCGGAACAGGGACCGGAAACCATTAATCAGGTTACCGAGCATAAGATGTCTGCCGAGTAA", - "dna_sequence_length": 4563, - "functions": [ - "putative secreted and surface-associated lipoprotein mucinase" - ], - "id": "CDS_2927", - "location": [ - [ - "NC_000913", - 3119112, - "-", - 4563 - ] - ], - "md5": "b78a303578bed2c46d2c2527c1ddedab", - "parent_gene": "", - "protein_md5": "68224df5eba91d973872663ddd881146", - "protein_translation": "MNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPDPEPTPEPIPDPEPTPEPEPEPVPTKTGYLTLGGSQRVTGATCNGESSDGFTFKPGEDVTCVAGNTTIATFNTQSEAARSLRAVEKVSFSLEDAQELAGSDDKKSNAVSLVTSSNSCPANTEQVCLTFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTSPVVPVTTPGTKPDLNASFVSANAEQFYQYQPTEIILSEGRLVDSQGYGVAGVNYYTNSGRGVTGENGEFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHRYSTTGQNNTRVVPDDVRKVFAEYPNVINEIINLSLSNGATLGEGEQVVNLPNEFIEQFNTGQAKEIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHDSTNFYGSTGNARGQAVVNISNAAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSLVEPENVTRDTATFNLPFISLGQVGEGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCTLNSDPDDMKNFMENVLRYLSDDKWKPDAKASMTVGTNLDTVYFKRHGQVTGNSAAFDFHPDFAGISVEHLSSYGDLDPQEMPLLILNGFEYVTQVGNDPYAIPLRADTSKPKLTQQDVTDLIAYLNKGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNNDPQGYPNRVRQQRATGIWVYERYPAVDGALPYTIDSKTGEVKWKYQVENKPDDKPKLEVASWLEDVDGKQETRYAFIDEADHKTEDSLKAAKEKIFAAFPGLKECTNPAYHYEVNCLEYRPGTGVPVTGGMYVPQYTQLSLNADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSSVDLERLYQNMSVWLWNDTSYRYEEGKNDELGFKTFTEFLNCYANDAYAGGTKCSADLKKSLVDNNMIYGDGSSKAGMMNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGAVSEEGQNVTETISLYSNPTKWFAGNMQSTGLWAPAQKEVTIKSNANVPVTVTVALADDLTGREKHEVALNRPPRVTKTYSLDASGTVKFKVPYGGLIYIKGNSSTNESASFTFTGVVKAPFYKDGAWKNDLNSPAPLGELESDAFVYTTPKKNLNASNYTGGLEQFANDLDTFASSMNDFYGRDSEDGKHRMFTYKNLPGHKHRFTNDVQISIGDAHSGYPVMNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNNQAWARGGAGDRLLMYAQLKEWAEKNFDIKKWYPDGTPLPEFYSEREGMKGWNLFQLMHRKARGDEVSNDKFGGKNYCAESNGNAADTLMLCASWVAQTDLSEFFKKWNPGANAYQLPGASEMSFEGGVSQSAYNTLASLDLPKPEQGPETINQVTEHKMSAE", - "protein_translation_length": 1520, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130875" - ], - [ - "gene_synonym", - "GeneID:947259" - ], - [ - "gene_synonym", - "JW2942" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46839" - ], - [ - "gene_synonym", - "ASAP:ABE-0009763" - ], - [ - "gene_synonym", - "yghK" - ], - [ - "gene_synonym", - "EcoGene:EG12995" - ], - [ - "gene_synonym", - "ECK2969" - ], - [ - "gene_synonym", - "NP_417449.1" - ], - [ - "gene_synonym", - "b2975" - ], - [ - "gene_synonym", - "glcA" - ] - ], - "dna_sequence": "ATGGTTACCTGGACCCAAATGTATATGCCGATGGGAGGACTGGGGCTATCCGCTCTGGTCGCCCTGATCCCGATAATATTCTTCTTCGTTGCACTCGCGGTATTACGTCTGAAAGGACATGTCGCTGGAGCAATAACCCTTATATTATCTATCCTGATTGCAATATTCGCCTTTAAAATGCCGATTGATATGGCATTTGCTGCTGCGGGCTATGGCTTTATTTATGGATTATGGCCAATAGCGTGGATTATTGTCGCGGCGGTGTTCCTGTATAAATTAACCGTTGCCAGCGGGCAGTTCGATATTATCCGCAGCTCGGTTATCTCCATCACCGACGATCAGCGTTTGCAGGTGTTACTGATTGGTTTCTCCTTTGGTGCGTTGCTGGAAGGAGCGGCTGGCTTTGGTGCGCCGGTGGCGATTACCGGTGCGCTGCTGGTGGGCCTGGGCTTCAAACCGTTATACGCGGCGGGGCTGTGTCTGATTGCCAATACTGCGCCGGTGGCGTTTGGTGCGTTGGGCGTGCCGATTCTGGTCGCCGGTCAGGTAACGGGAATCGATCCGTTCCACATTGGCGCAATGGCGGGACGTCAGTTACCGTTCCTGTCGGTTCTTGTGCCGTTCTGGCTGGTAGCAATGATGGACGGCTGGAAAGGGGTGAAAGAGACGTGGCCAGCGGCGCTGGTTGCTGGGGGAAGCTTCGCTGTCACTCAGTTCTTTACCTCTAACTATATTGGTCCGGAACTGCCGGATATTACTTCGGCGCTGGTGAGTATCGTCTCACTCGCTTTATTCCTTAAAGTCTGGCGGCCGAAAAATACCGAAACGGCAATCAGCATGGGACAATCCGCAGGTGCGATGGTGGTAAATAAGCCATCTTCTGGCGGTCCCGTGCCTTCAGAATATAGTCTGGGGCAAATCATTCGAGCGTGGTCACCGTTTTTAATCTTAACGGTGCTGGTCACCATCTGGACCATGAAGCCGTTTAAAGCGTTATTTGCTCCGGGCGGCGCGTTTTATTCACTGGTGATTAATTTCCAGATCCCTCATTTGCATCAACAAGTGTTGAAAGCGGCACCCATTGTCGCCCAACCAACGCCAATGGATGCGGTGTTTAAATTCGACCCCCTCTCGGCTGGCGGCACCGCTATTTTTATTGCGGCGATTATCTCTATCTTCATCCTCGGTGTGGGGATCAAGAAAGGTATTGGCGTCTTTGCCGAAACGCTAATTAGCTTGAAGTGGCCGATACTGTCGATTGGCATGGTGCTGGCGTTCGCCTTCGTCACCAACTATTCTGGCATGTCCACCACGCTGGCGCTGGTACTGGCAGGTACAGGCGTGATGTTCCCGTTCTTCTCACCGTTTCTCGGCTGGCTGGGCGTATTCCTTACCGGCTCGGACACCTCCTCTAACGCCCTGTTTGGTTCACTGCAATCGACCACGGCGCAGCAAATCAACGTCTCTGACACCCTGCTGGTGGCAGCAAACACCAGCGGCGGCGTAACTGGCAAGATGATCTCCCCGCAATCTATCGCCGTGGCCTGCGCCGCGACGGGCATGGTGGGCCGAGAATCTGAACTGTTCCGCTACACCGTGAAGCACAGTCTGATTTTTGCCAGCGTTATCGGCATTATCACCCTGCTGCAGGCGTATGTGTTTACCGGGATGTTAGTCTCGTAA", 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"gene_synonym", - "ECK2970" - ], - [ - "gene_synonym", - "NP_417450.1" - ], - [ - "gene_synonym", - "EcoGene:EG20080" - ], - [ - "gene_synonym", - "glc" - ], - [ - "gene_synonym", - "ASAP:ABE-0009767" - ], - [ - "gene_synonym", - "GI:16130876" - ], - [ - "gene_synonym", - "GeneID:948857" - ], - [ - "gene_synonym", - "b2976" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37330" - ], - [ - "gene_synonym", - "glcB" - ] - ], - "dna_sequence": "ATGAGTCAAACCATAACCCAGAGCCGTTTACGCATTGACGCCAATTTTAAACGTTTTGTGGATGAAGAAGTTTTACCGGGAACAGGGCTGGACGCTGCGGCGTTCTGGCGCAATTTTGATGAGATCGTTCATGATCTGGCACCAGAAAATCGTCAGTTGCTGGCAGAACGCGATCGCATTCAGGCAGCGCTTGATGAGTGGCATCGCAGCAATCCGGGGCCGGTAAAAGATAAAGCGGCCTATAAATCTTTCCTGCGTGAACTGGGCTACCTGGTGCCGCAACCGGAGCGCGTGACGGTGGAAACCACGGGCATTGACAGCGAAATCACCAGCCAGGCGGGGCCGCAGCTGGTGGTTCCGGCAATGAACGCCCGCTACGCGCTGAACGCGGCGAACGCTCGCTGGGGCTCACTGTACGATGCGTTATACGGCAGCGACATCATCCCGCAGGAAGGGGCGATGGTCAGCGGCTACGATCCGCAACGCGGTGAGCAGGTTATCGCCTGGGTTCGGCGTTTCCTCGATGAATCTCTACCGCTGGAAAACGGCAGCTATCAGGATGTGGTGGCGTTTAAGGTGGTTGATAAACAATTACGCATCCAGTTGAAAAATGGTAAAGAAACCACGTTACGTACTCCAGCACAGTTTGTCGGTTACCGTGGCGATGCCGCTGCGCCGACCTGCATTTTGCTGAAAAATAACGGCCTGCATATTGAGCTGCAAATCGATGCCAATGGGCGGATTGGCAAAGACGATCCGGCGCACATCAACGATGTTATCGTCGAAGCTGCTATCAGTACCATTCTCGACTGCGAAGATTCGGTCGCGGCGGTTGATGCGGAAGATAAAATCCTGCTGTACCGCAACCTGCTGGGCCTGATGCAGGGGACTCTGCAAGAGAAAATGGAGAAAAACGGTCGGCAAATCGTGCGTAAACTGAATGACGATCGTCATTACACCGCCGCCGATGGCTCTGAAATTTCTCTGCACGGACGCTCGCTGCTGTTTATCCGCAACGTGGGTCATTTGATGACCATTCCTGTGATTTGGGACAGCGAAGGCAATGAAATCCCGGAAGGCATTCTTGATGGCGTCATGACTGGCGCGATTGCCCTCTATGATTTAAAAGTGCAGAAAAACTCGCGCACTGGCAGCGTCTATATTGTGAAACCGAAAATGCACGGTCCGCAGGAAGTGGCGTTCGCCAACAAACTGTTTACCCGCATTGAGACAATGCTCGGTATGGCACCGAATACCCTGAAAATGGGCATTATGGATGAAGAACGTCGGACCTCGCTGAACTTGCGTAGCTGTATCGCTCAGGCGCGCAACCGCGTGGCGTTCATCAATACCGGTTTCCTCGACCGTACCGGCGATGAAATGCATTCGGTGATGGAAGCTGGCCCGATGCTGCGTAAAAATCAGATGAAATCGACGCCTTGGATCAAAGCCTACGAGCGTAATAACGTGCTTTCCGGTCTGTTCTGTGGGCTGCGCGGTAAAGCGCAAATTGGTAAAGGCATGTGGGCAATGCCGGACCTGATGGCAGACATGTACAGCCAGAAGGGCGACCAACTGCGTGCCGGGGCAAACACAGCCTGGGTTCCGTCACCAACCGCTGCTACGCTCCATGCGCTGCACTACCACCAAACCAACGTACAGAGCGTACAAGCCAACATTGCCCAGACCGAGTTCAATGCTGAATTTGAACCGCTGCTGGACGATCTGCTGACTATTCCGGTTGCTGAAAACGCTAACTGGTCGGCGCAAGAGATCCAACAAGAGCTGGATAACAACGTGCAGGGGATTCTGGGGTACGTGGTGCGCTGGGTGGAGCAGGGGATTGGTTGTTCAAAAGTGCCGGATATTCACAATGTGGCGTTGATGGAAGACCGCGCAACGCTGCGTATCTCCAGCCAGCATATCGCCAACTGGTTACGTCACGGTATTCTGACCAAAGAACAGGTGCAGGCGTCGCTGGAGAATATGGCGAAAGTGGTTGATCAGCAAAACGCTGGCGATCCGGCTTATCGTCCGATGGCGGGGAATTTCGCTAACTCGTGTGCTTTTAAAGCTGCCAGCGATTTAATCTTCCTCGGCGTGAAACAGCCAAACGGCTATACCGAACCGTTATTACACGCCTGGCGTTTACGCGAAAAAGAAAGTCATTAA", - "dna_sequence_length": 2172, - "functions": [ - "malate synthase G" - ], - "id": "CDS_2929", - "location": [ - [ - "NC_000913", - 3123805, - "-", - 2172 - ] - ], - "md5": "dcb51afcb1fc0ef311043dd8120de7a5", - "parent_gene": "", - "protein_md5": "1461bb5c0af6c1a3aebae69669861fdd", - "protein_translation": "MSQTITQSRLRIDANFKRFVDEEVLPGTGLDAAAFWRNFDEIVHDLAPENRQLLAERDRIQAALDEWHRSNPGPVKDKAAYKSFLRELGYLVPQPERVTVETTGIDSEITSQAGPQLVVPAMNARYALNAANARWGSLYDALYGSDIIPQEGAMVSGYDPQRGEQVIAWVRRFLDESLPLENGSYQDVVAFKVVDKQLRIQLKNGKETTLRTPAQFVGYRGDAAAPTCILLKNNGLHIELQIDANGRIGKDDPAHINDVIVEAAISTILDCEDSVAAVDAEDKILLYRNLLGLMQGTLQEKMEKNGRQIVRKLNDDRHYTAADGSEISLHGRSLLFIRNVGHLMTIPVIWDSEGNEIPEGILDGVMTGAIALYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFINTGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGKGMWAMPDLMADMYSQKGDQLRAGANTAWVPSPTAATLHALHYHQTNVQSVQANIAQTEFNAEFEPLLDDLLTIPVAENANWSAQEIQQELDNNVQGILGYVVRWVEQGIGCSKVPDIHNVALMEDRATLRISSQHIANWLRHGILTKEQVQASLENMAKVVDQQNAGDPAYRPMAGNFANSCAFKAASDLIFLGVKQPNGYTEPLLHAWRLREKESH", - "protein_translation_length": 723, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130877" - ], - [ - "gene_synonym", - "yghC" - ], - [ - "gene_synonym", - "JW2944" - ], - [ - "gene_synonym", - "ECK2971" - ], - [ - "gene_synonym", - "EcoGene:EG12952" - ], - [ - "gene_synonym", - "GeneID:947473" - ], - [ - "gene_synonym", - "NP_417451.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEQ1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009769" - ], - [ - "gene_synonym", - "b2977" - ], - [ - "gene_synonym", - "glcG" - ] - ], - "dna_sequence": "ATGAAAACTAAAGTCATTCTTAGCCAGCAAATGGCGAGTGCAATTATTGCCGCAGGTCAGGAAGAGGCGCAGAAAAATAACTGGTCTGTTTCCATTGCTGTTGCCGATGACGGCGGTCATCTGCTGGCGTTAAGTCGCATGGACGATTGCGCGCCGATTGCGGCTTATATCTCCCAGGAGAAAGCGCGTACCGCCGCGCTGGGGCGTCGTGAAACTAAGGGCTATGAAGAGATGGTGAACAACGGACGTACCGCGTTCGTGACTGCGCCGTTATTAACGTCGCTGGAAGGCGGCGTACCGGTTGTTGTGGATGGGCAAATTATTGGTGCCGTGGGCGTTTCTGGTTTAACCGGAGCACAGGATGCGCAGGTCGCGAAAGCGGCAGCAGCGGTGTTGGCGAAATAA", - "dna_sequence_length": 405, - "functions": [ - "DUF336 family protein" - ], - "id": "CDS_2930", - "location": [ - [ - "NC_000913", - 3124231, - "-", - 405 - ] - ], - "md5": "b5dd0656fcbbe786933292ca64ea6e72", - "parent_gene": "", - "protein_md5": "a877b45cd5ab13c71ade9f179fbb0c9c", - "protein_translation": "MKTKVILSQQMASAIIAAGQEEAQKNNWSVSIAVADDGGHLLALSRMDDCAPIAAYISQEKARTAALGRRETKGYEEMVNNGRTAFVTAPLLTSLEGGVPVVVDGQIIGAVGVSGLTGAQDAQVAKAAAAVLAK", - "protein_translation_length": 134, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4467" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52074" - ], - [ - "gene_synonym", - "ECK2972" - ], - [ - "gene_synonym", - "yghL" - ], - [ - "gene_synonym", - "ASAP:ABE-0174097" - ], - [ - "gene_synonym", - "gox" - ], - [ - "gene_synonym", - "JW5486" - ], - [ - "gene_synonym", - "GeneID:2847717" - ], - [ - "gene_synonym", - "glcF" - ], - [ - "gene_synonym", - "YP_026190.1" - ], - [ - "gene_synonym", - "EcoGene:EG13291" - ], - [ - "gene_synonym", - "GI:49176294" - ] - ], - "dna_sequence": "ATGCAAACCCAATTAACTGAAGAGATGCGGCAGAACGCGCGCGCGCTGGAAGCCGACAGCATCCTGCGCGCCTGTGTTCACTGCGGATTTTGTACCGCAACCTGCCCAACCTATCAGCTTCTGGGCGATGAACTGGACGGGCCGCGCGGGCGCATCTATCTGATTAAACAGGTGCTGGAAGGCAACGAAGTCACGCTTAAAACACAGGAGCATCTCGATCGCTGCCTCACTTGCCGTAATTGTGAAACCACCTGTCCTTCTGGTGTGCGCTATCACAATTTGCTGGATATCGGGCGTGATATTGTCGAGCAGAAAGTGAAACGCCCACTGCCGGAGCGAATACTGCGCGAAGGATTGCGCCAGGTAGTGCCGCGTCCGGCGGTCTTCCGTGCGCTGACGCAGGTAGGGCTGGTGCTGCGACCGTTTTTACCGGAACAGGTCAGAGCAAAACTGCCTGCTGAAACGGTGAAAGCTAAACCGCGTCCGCCGCTGCGCCATAAGCGTCGGGTTTTAATGTTGGAAGGCTGCGCCCAGCCTACGCTTTCGCCCAACACCAACGCGGCAACTGCGCGAGTGCTGGATCGTCTGGGGATCAGCGTCATGCCAGCTAACGAAGCAGGCTGTTGTGGCGCGGTGGACTATCATCTTAATGCGCAGGAGAAAGGGCTGGCACGGGCGCGCAATAATATTGATGCCTGGTGGCCCGCGATTGAAGCAGGTGCCGAGGCAATTTTGCAAACCGCCAGCGGCTGCGGCGCGTTTGTCAAAGAGTATGGGCAGATGCTGAAAAACGATGCGTTATATGCCGATAAAGCACGTCAGGTCAGTGAACTGGCGGTCGATTTAGTCGAACTTCTGCGCGAGGAACCGCTGGAAAAACTGGCAATTCGCGGCGATAAAAAGCTGGCCTTCCACTGTCCGTGTACCCTACAACATGCGCAAAAGCTGAACGGCGAAGTGGAAAAAGTGTTGCTTCGTCTTGGATTTACCTTAACGGACGTTCCCGACAGCCATCTGTGCTGCGGTTCAGCGGGAACATATGCGTTAACGCATCCCGATCTGGCACGCCAGCTGCGGGATAACAAAATGAATGCGCTGGAAAGCGGCAAACCGGAAATGATCGTCACCGCCAACATTGGTTGCCAGACGCATCTGGCGAGCGCCGGTCGTACCTCTGTGCGTCACTGGATTGAAATTGTAGAACAAGCCCTTGAAAAGGAATAA", - "dna_sequence_length": 1224, - "functions": [ - "glycolate oxidase 4Fe-4S iron-sulfur cluster subunit" - ], - "id": "CDS_2931", - "location": [ - [ - "NC_000913", - 3125459, - "-", - 1224 - ] - ], - "md5": "4bafe0653ef4292e8ab71d48128cdce0", - "parent_gene": "", - "protein_md5": "07a02f69d8d9bd332d5c5b9ca422a886", - "protein_translation": "MQTQLTEEMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEGNEVTLKTQEHLDRCLTCRNCETTCPSGVRYHNLLDIGRDIVEQKVKRPLPERILREGLRQVVPRPAVFRALTQVGLVLRPFLPEQVRAKLPAETVKAKPRPPLRHKRRVLMLEGCAQPTLSPNTNAATARVLDRLGISVMPANEAGCCGAVDYHLNAQEKGLARARNNIDAWWPAIEAGAEAILQTASGCGAFVKEYGQMLKNDALYADKARQVSELAVDLVELLREEPLEKLAIRGDKKLAFHCPCTLQHAQKLNGEVEKVLLRLGFTLTDVPDSHLCCGSAGTYALTHPDLARQLRDNKMNALESGKPEMIVTANIGCQTHLASAGRTSVRHWIEIVEQALEKE", - "protein_translation_length": 407, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52073" - ], - [ - "gene_synonym", - "ECK2973" - ], - [ - "gene_synonym", - "GeneID:2847718" - ], - [ - "gene_synonym", - "yghL" - ], - [ - "gene_synonym", - "b4468" - ], - [ - "gene_synonym", - "EcoGene:EG12996" - ], - [ - "gene_synonym", - "gox" - ], - [ - "gene_synonym", - "JW5487" - ], - [ - "gene_synonym", - "glcE" - ], - [ - "gene_synonym", - "YP_026191.1" - ], - [ - "gene_synonym", - "GI:49176295" - ], - [ - "gene_synonym", - "ASAP:ABE-0174098" - ] - ], - "dna_sequence": "ATGCTACGCGAGTGTGATTACAGCCAGGCGCTGCTGGAGCAGGTGAATCAGGCGATTAGCGATAAAACGCCGCTGGTGATTCAGGGCAGCAATAGCAAAGCCTTTTTAGGTCGCCCTGTCACCGGGCAAACGCTGGATGTTCGTTGTCATCGCGGCATTGTTAATTACGACCCGACCGAGCTGGTGATAACCGCGCGTGTCGGAACGCCGCTGGTGACAATTGAAGCGGCGCTGGAAAGCGCGGGGCAAATGCTCCCCTGTGAGCCGCCGCATTATGGTGAAGAAGCCACCTGGGGCGGGATGGTCGCCTGCGGGCTGGCGGGGCCGCGTCGCCCGTGGAGCGGTTCGGTCCGCGATTTTGTCCTCGGCACGCGCATCATTACCGGCGCTGGAAAACATCTGCGTTTTGGTGGCGAAGTGATGAAAAACGTTGCCGGATACGATCTCTCACGGTTAATGGTCGGAAGCTACGGTTGTCTTGGCGTGCTCACTGAAATCTCAATGAAAGTGTTACCGCGACCGCGCGCCTCCCTGAGCCTGCGTCGGGAAATCAGCCTGCAAGAAGCCATGAGTGAAATCGCCGAGTGGCAACTCCAGCCATTACCCATTAGTGGCTTATGTTACTTCGACAATGCGTTGTGGATCCGCCTTGAGGGCGGCGAAGGATCGGTAAAAGCAGCGCGTGAACTGCTGGGTGGCGAAGAGGTTGCCGGTCAGTTCTGGCAGCAATTGCGTGAACAACAACTGCCGTTCTTCTCGTTACCAGGTACCTTATGGCGCATTTCATTACCCAGTGATGCGCCGATGATGGATTTACCCGGCGAGCAACTGATCGACTGGGGCGGGGCGTTACGCTGGCTGAAATCGACAGCCGAGGACAATCAAATCCATCGCATCGCCCGCAACGCTGGCGGTCATGCGACCCGCTTTAGTGCCGGAGATGGTGGCTTTGCCCCGCTATCGGCTCCTTTATTCCGCTATCACCAGCAGCTTAAACAGCAGCTCGACCCTTGCGGCGTGTTTAACCCCGGTCGCATGTACGCGGAACTTTGA", - "dna_sequence_length": 1053, - "functions": [ - "glycolate oxidase FAD binding subunit" - ], - "id": "CDS_2932", - "location": [ - [ - "NC_000913", - 3126522, - "-", - 1053 - ] - ], - "md5": "9bed154f7a8928644d371305536cdea8", - "parent_gene": "", - "protein_md5": "d023a1f843149102295f1c8655cb7dd8", - "protein_translation": "MLRECDYSQALLEQVNQAISDKTPLVIQGSNSKAFLGRPVTGQTLDVRCHRGIVNYDPTELVITARVGTPLVTIEAALESAGQMLPCEPPHYGEEATWGGMVACGLAGPRRPWSGSVRDFVLGTRIITGAGKHLRFGGEVMKNVAGYDLSRLMVGSYGCLGVLTEISMKVLPRPRASLSLRREISLQEAMSEIAEWQLQPLPISGLCYFDNALWIRLEGGEGSVKAARELLGGEEVAGQFWQQLREQQLPFFSLPGTLWRISLPSDAPMMDLPGEQLIDWGGALRWLKSTAEDNQIHRIARNAGGHATRFSAGDGGFAPLSAPLFRYHQQLKQQLDPCGVFNPGRMYAEL", - "protein_translation_length": 350, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2974" - ], - [ - "gene_synonym", - "JW2946" - ], - [ - "gene_synonym", - "GeneID:947353" - ], - [ - "gene_synonym", - "GI:16130879" - ], - [ - "gene_synonym", - "yghM" - ], - [ - "gene_synonym", - "ASAP:ABE-0009773" - ], - [ - "gene_synonym", - "EcoGene:EG12997" - ], - [ - "gene_synonym", - "NP_417453.1" - ], - [ - "gene_synonym", - "b2979" - ], - [ - "gene_synonym", - "gox" - ], - [ - "gene_synonym", - "glcD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEP9" - ] - ], - "dna_sequence": "ATGAGCATCTTGTACGAAGAGCGTCTTGATGGCGCTTTACCCGATGTCGACCGCACATCGGTACTGATGGCACTGCGTGAGCATGTCCCTGGACTTGAGATCCTGCATACCGATGAGGAGATCATTCCTTACGAGTGTGACGGGTTGAGCGCGTATCGCACGCGTCCATTACTGGTTGTTCTGCCTAAGCAAATGGAACAGGTGACAGCGATTCTGGCTGTCTGCCATCGCCTGCGTGTACCGGTGGTGACCCGTGGTGCAGGCACCGGGCTTTCTGGTGGCGCGCTGCCGCTGGAAAAAGGTGTGTTGTTGGTGATGGCGCGCTTTAAAGAGATCCTCGACATTAACCCCGTTGGTCGCCGCGCGCGCGTGCAGCCAGGCGTGCGTAACCTGGCGATCTCCCAGGCCGTTGCACCGCATAATCTCTACTACGCACCGGACCCTTCCTCACAAATCGCCTGTTCCATTGGCGGCAATGTGGCTGAAAATGCCGGCGGCGTCCACTGCCTGAAATATGGTCTGACCGTACATAACCTGCTGAAAATTGAAGTGCAAACGCTGGACGGCGAGGCACTGACGCTTGGATCGGACGCGCTGGATTCACCTGGTTTTGACCTGCTGGCGCTGTTCACCGGATCGGAAGGTATGCTCGGCGTGACCACCGAAGTGACGGTAAAACTGCTGCCGAAGCCGCCCGTGGCGCGGGTTCTGTTAGCCAGCTTTGACTCGGTAGAAAAAGCCGGACTTGCGGTTGGTGACATCATCGCCAATGGCATTATCCCCGGCGGGCTGGAGATGATGGATAACCTGTCGATCCGCGCGGCGGAAGATTTTATTCATGCCGGTTATCCCGTCGACGCCGAAGCGATTTTGTTATGCGAGCTGGACGGCGTGGAGTCTGACGTACAGGAAGACTGCGAGCGGGTTAACGACATCTTGTTGAAAGCGGGCGCGACTGACGTCCGTCTGGCACAGGACGAAGCAGAGCGCGTACGTTTCTGGGCCGGTCGCAAAAATGCGTTCCCGGCGGTAGGACGTATCTCCCCGGATTACTACTGCATGGATGGCACCATCCCGCGTCGCGCCCTGCCTGGCGTACTGGAAGGCATTGCCCGTTTATCGCAGCAATATGATTTACGTGTTGCCAACGTCTTTCATGCCGGAGATGGCAACATGCACCCGTTAATCCTTTTCGATGCCAACGAACCCGGTGAATTTGCCCGCGCGGAAGAGCTGGGCGGGAAGATCCTCGAACTCTGCGTTGAAGTTGGCGGCAGCATCAGTGGCGAACATGGCATCGGGCGAGAAAAAATCAATCAAATGTGCGCCCAGTTCAACAGCGATGAAATCACGACCTTCCATGCGGTCAAGGCGGCGTTTGACCCCGATGGTTTGCTGAACCCTGGGAAAAACATTCCCACGCTACACCGCTGTGCTGAATTTGGTGCCATGCATGTGCATCACGGTCATTTACCTTTCCCTGAACTGGAGCGTTTCTGA", - "dna_sequence_length": 1500, - "functions": [ - "glycolate oxidase subunit, FAD-linked" - ], - "id": "CDS_2933", - "location": [ - [ - "NC_000913", - 3128021, - "-", - 1500 - ] - ], - "md5": "2cce014a72207a952a7e3c4093e69d06", - "parent_gene": "", - "protein_md5": "89bb9b613b675dd2f4cc12cbb2dd3c21", - "protein_translation": "MSILYEERLDGALPDVDRTSVLMALREHVPGLEILHTDEEIIPYECDGLSAYRTRPLLVVLPKQMEQVTAILAVCHRLRVPVVTRGAGTGLSGGALPLEKGVLLVMARFKEILDINPVGRRARVQPGVRNLAISQAVAPHNLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNLLKIEVQTLDGEALTLGSDALDSPGFDLLALFTGSEGMLGVTTEVTVKLLPKPPVARVLLASFDSVEKAGLAVGDIIANGIIPGGLEMMDNLSIRAAEDFIHAGYPVDAEAILLCELDGVESDVQEDCERVNDILLKAGATDVRLAQDEAERVRFWAGRKNAFPAVGRISPDYYCMDGTIPRRALPGVLEGIARLSQQYDLRVANVFHAGDGNMHPLILFDANEPGEFARAEELGGKILELCVEVGGSISGEHGIGREKINQMCAQFNSDEITTFHAVKAAFDPDGLLNPGKNIPTLHRCAEFGAMHVHHGHLPFPELERF", - "protein_translation_length": 499, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12998" - ], - [ - "gene_synonym", - "ECK2975" - ], - [ - "gene_synonym", - "JW2947" - ], - [ - "gene_synonym", - "ASAP:ABE-0009777" - ], - [ - "gene_synonym", - "yghN" - ], - [ - "gene_synonym", - "b2980" - ], - [ - "gene_synonym", - "GI:16130880" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACL5" - ], - [ - "gene_synonym", - "GeneID:947466" - ], - [ - "gene_synonym", - "NP_417454.1" - ], - [ - "gene_synonym", - "glcC" - ] - ], - "dna_sequence": "ATGAAAGATGAACGTCGCCCTATTTGCGAAGTGGTTGCAGAGAGTATCGAACGGTTAATTATCGACGGCGTACTGAAGGTCGGTCAGCCGCTTCCCTCGGAACGTCGACTGTGTGAAAAGCTCGGCTTCTCACGCTCCGCACTGCGTGAAGGGCTGACCGTGCTGCGCGGGCGCGGGATTATTGAAACGGCGCAGGGTCGCGATTCTCGTGTCGCACGGCTTAATCGGGTGCAGGACACCAGCCCGCTGATCCATCTGTTCAGTACGCAGCCGCGAACGCTGTACGATCTGCTCGACGTTCGCGCATTACTGGAGGGCGAATCGGCAAGGCTGGCGGCAACGCTGGGAACGCAGGCTGATTTTGTTGTGATAACCCGCTGTTATGAAAAAATGCTCGCCGCCAGTGAGAACAACAAAGAGATTTCGCTGATCGAACATGCGCAGTTGGATCACGCTTTCCATCTCGCCATTTGTCAGGCTTCTCACAATCAGGTGCTGGTGTTTACGCTGCAATCATTGACCGATCTGATGTTTAATTCAGTGTTTGCCAGCGTAAATAATCTCTACCATCGACCACAGCAAAAAAAGCAGATCGATCGCCAGCATGCGCGGATCTACAACGCGGTGTTGCAGCGGCTGCCGCACGTCGCCCAGCGCGCAGCACGCGATCATGTGCGGACCGTGAAAAAGAATCTCCACGATATCGAGCTGGAAGGCCACCATTTGATTCGCTCGGCGGTGCCGCTGGAGATGAACCTGAGTTAG", - "dna_sequence_length": 765, - "functions": [ - "glycolate-inducible glc operon transcriptional repressor", - "autorepressor" - ], - "id": "CDS_2934", - "location": [ - [ - "NC_000913", - 3128272, - "+", - 765 - ] - ], - "md5": "5ec2b3adc2d4ec1819a42e5642c98d91", - "parent_gene": "", - "protein_md5": "5906ab6a487a988f797855890557a11d", - "protein_translation": "MKDERRPICEVVAESIERLIIDGVLKVGQPLPSERRLCEKLGFSRSALREGLTVLRGRGIIETAQGRDSRVARLNRVQDTSPLIHLFSTQPRTLYDLLDVRALLEGESARLAATLGTQADFVVITRCYEKMLAASENNKEISLIEHAQLDHAFHLAICQASHNQVLVFTLQSLTDLMFNSVFASVNNLYHRPQQKKQIDRQHARIYNAVLQRLPHVAQRAARDHVRTVKKNLHDIELEGHHLIRSAVPLEMNLS", - "protein_translation_length": 254, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2976" - ], - [ - "gene_synonym", - "EcoGene:EG12999" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46840" - ], - [ - "gene_synonym", - "yghO" - ], - [ - "gene_synonym", - "b2981" - ], - [ - "gene_synonym", - "GeneID:947701" - ], - [ - "gene_synonym", - "JW5848" - ], - [ - "gene_synonym", - "ASAP:ABE-0009779" - ] - ], - "dna_sequence": "AATAAAAATGACCTTAAGGCATTTATCGCTTTTCCGTCATCACTTTATCCCGACGATCCAAACTGGATACCCCCTTTATTCATTGAACGCAACGAGCATTTGTCTGCGAAAAATCCGGGGACGGACCATATCATCTGGCAGGCGTGGGTGGCAAAAAAAGCGGGGCAGATAGTTGGGCGTATTACCGCGCAAATAGATACCTTGCACCGCGAGCGTTACGGCAAAGATACCGGTCATTTCGGCATGATTGACGCCATTGATGATCCGCAGGTTTTTGCCGCGTTGTTTGGCGCAGCGGAAGCGTGGTTGAAGTCACAAGGTGCAAGTAAGATCAGCGGTCCTTTCAGCCTGAATATCAATCAGGAAAGCGGATTACTGATTGAAGGTTTTGACACACCACCCTGTGCGATGATGCCACACGGCAAACCGTGGTATGCCGCGCATATTGAACAACTGGGTTATCACAAAGGCATTGATTTACTGGCGTGGTGGATGCAGCGAACCGATCTCACTTTCTCTCCGGCGCTAAAAAAACTGATGGATCAGGTGCGCAAAAAGGTGACCATTCGCTGCATCAATCGTCAGCGGTTTGCCGAAGAGATGCAGATCCTGCGTGAGATTTTCAACTCTGGCTGGCAGCACAACTGGGGATTTGTGCCGTTTACCGAACATGAATTCGCGACCATGGGCGATCAACTTAAATATCTGGTGCCGGACGATATGATCTATATCGCTGAGATTGATTCTGCACCCTGCGCGTTTATTGTCGGCTTGCCGAACATCAACGAGGCGATTGCCGATCTGAACGGATCGCTCTTTCCCTTCGGCTGGGCAAAATTGCTGTGGCGTTTGAAAGTCAGCGGTGTGCGAACTGCGCGAGTACCGCTGATGGGCGTGCGCGACGAGTATCAGTTCAGCCGCATCGGCCCGGTGATTGCGCTGTTATTGATTGAAGCCTTACGCGATCCGTTTGCCCGCCGGAAGATCGATGCGCTGGAGATGTCATGGATCCTCGAAACCAATACAGGCATGAATAACATGCTGGAACGCATTGGGGCGGAGCCGTACAAGCGTTACCGATTGTATGAAAAGCAGATTTAA", - "dna_sequence_length": 1101, - "id": "CDS_2935", - "location": [ - [ - "NC_000913", - 3130143, - "-", - 1101 - ] - ], - "md5": "c54b79a91111b6d87c93ce9e2bfe0e06", - "parent_gene": "", - "protein_md5": "5c45ca49a6f305f4599f02e61a9a3403", - "protein_translation": "NKNDLKAFIAFPSSLYPDDPNWIPPLFIERNEHLSAKNPGTDHIIWQAWVAKKAGQIVGRITAQIDTLHRERYGKDTGHFGMIDAIDDPQVFAALFGAAEAWLKSQGASKISGPFSLNINQESGLLIEGFDTPPCAMMPHGKPWYAAHIEQLGYHKGIDLLAWWMQRTDLTFSPALKKLMDQVRKKVTIRCINRQRFAEEMQILREIFNSGWQHNWGFVPFTEHEFATMGDQLKYLVPDDMIYIAEIDSAPCAFIVGLPNINEAIADLNGSLFPFGWAKLLWRLKVSGVRTARVPLMGVRDEYQFSRIGPVIALLLIEALRDPFARRKIDALEMSWILETNTGMNNMLERIGAEPYKRYRLYEKQI", - "protein_translation_length": 366, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009783" - ], - [ - "gene_synonym", - "EcoGene:EG40008" - ], - [ - "gene_synonym", - "NP_417456.1" - ], - [ - "gene_synonym", - "GeneID:947516" - ], - [ - "gene_synonym", - "insH1" - ], - [ - "gene_synonym", - "b2982" - ], - [ - "gene_synonym", - "GI:16130882" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CE56" - ], - [ - "gene_synonym", - "ECK0261" - ] - ], - "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", - "dna_sequence_length": 1017, - "functions": [ - "IS5 transposase and trans-activator" - ], - "id": "CDS_2936", - "location": [ - [ - "NC_000913", - 3130178, - "+", - 1017 - ] - ], - "md5": "59571096a52db4971db033e04651ef59", - "parent_gene": "", - "protein_md5": "75d20978a034ac97cbf88235b32b7ad9", - "protein_translation": "MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", - "protein_translation_length": 338, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2977" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46841" - ], - [ - "gene_synonym", - "ASAP:ABE-0009786" - ], - [ - "gene_synonym", - "YP_026192.1" - ], - [ - "gene_synonym", - "yghQ" - ], - [ - "gene_synonym", - "b2983" - ], - [ - "gene_synonym", - "GeneID:947716" - ], - [ - "gene_synonym", - "EcoGene:EG13001" - ], - [ - "gene_synonym", - "GI:49176296" - ], - [ - "gene_synonym", - "JW5490" - ] - ], - "dna_sequence": "TTGGCGGGTTTTAACATCAAACATTGGTTTGCAGATGGCGCGTTTCGCACCATTATTCGCAATAGCGCCTGGTTAGGCTCCAGTAATGTCGTGAGCGCCTTGCTGGGTCTGTTGGCGCTCTCGTGTGCCGGTAAAGGGATGACGCCCGCCATGTTTGGCGTACTGGTGATTGTGCAATCGTACGCCAAGTCGATCAGCGATTTTATTAAGTTTCAGACATGGCAACTGGTGGTTCAGTACGGAACACCAGCATTAACCAACAATAATCCGCAGCAATTCCGCAATGTCGTCTCATTTTCCTTCTCGCTGGATATCGTCAGCGGCGCGGTGGCGATTGTCGGTGGCATTGCCTTACTGCCATTCCTTTCCCATTCATTAGGTCTGGATGACCAAAGTTTTTGGCTGGCAGCGCTCTATTGCACGCTCATTCCTTCAATGGCTTCCTCCACGCCGACCGGCATTCTGCGTGCGGTAGATCGCTTCGATTTAATTGCTGTACAGCAGGCGACGAAACCTTTTCTGCGCGCAGCGGGGAGCGTCGTAGCCTGGTATTTTGACTTTGGTTTTGCGGGTTTTGTTATTGCCTGGTACGTGTCGAATCTGGTTGGCGGCACCATGTACTGGTGGTTTGCCGCGCGCGAATTACGCCGCCGAAATATCCATAACGCCTTCAAATTGAATCTGTTTGAGTCTGCCCGATACATTAAAGGCGCGTGGAGTTTTGTCTGGTCAACCAACATTGCCCACTCCATCTGGTCGGCGCGTAACTCGTGCAGCACAGTGTTGGTGGGGATCGTGTTAGGACCCGCTGCCGCCGGGTTATTTAAAATCGCCATGACATTCTTCGACGCCGCCGGAACGCCAGCGGGTTTGCTGGGTAAAAGTTTTTACCCAGAGGTGATGCGTTTAGATCCGCGCACCACCAGACCGTGGTTGTTAGGTGTGAAGTCCGGTTTACTGGCGGGCGGAATCGGTATTCTGGTGGCGCTCGCGGTGTTGATCGTCGGCAAGCCGCTCATTTCGCTGGTGTTTGGCGTTAAGTATCTCGAAGCGTATGACCTGATTTAG", - "dna_sequence_length": 1068, - "functions": [ - "putative inner membrane polysaccharide flippase" - ], - "id": "CDS_2937", - "location": [ - [ - "NC_000913", - 3132408, - "-", - 1068 - ] - ], - "md5": "4eb896ba83b94cc18455822811c30ed6", - "parent_gene": "", - "protein_md5": "70690dd040a4353aefc6d9c391f3d765", - "protein_translation": "MAGFNIKHWFADGAFRTIIRNSAWLGSSNVVSALLGLLALSCAGKGMTPAMFGVLVIVQSYAKSISDFIKFQTWQLVVQYGTPALTNNNPQQFRNVVSFSFSLDIVSGAVAIVGGIALLPFLSHSLGLDDQSFWLAALYCTLIPSMASSTPTGILRAVDRFDLIAVQQATKPFLRAAGSVVAWYFDFGFAGFVIAWYVSNLVGGTMYWWFAARELRRRNIHNAFKLNLFESARYIKGAWSFVWSTNIAHSIWSARNSCSTVLVGIVLGPAAAGLFKIAMTFFDAAGTPAGLLGKSFYPEVMRLDPRTTRPWLLGVKSGLLAGGIGILVALAVLIVGKPLISLVFGVKYLEAYDLI", - "protein_translation_length": 355, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009789" - ], - [ - "gene_synonym", - "JW2952" - ], - [ - "gene_synonym", - "ECK2978" - ], - [ - "gene_synonym", - "GI:16130884" - ], - [ - "gene_synonym", - "GeneID:947310" - ], - [ - "gene_synonym", - "yghR" - ], - [ - "gene_synonym", - "b2984" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64572" - ], - [ - "gene_synonym", - "NP_417458.1" - ], - [ - "gene_synonym", - "EcoGene:EG13002" - ] - ], - "dna_sequence": "ATGGATGCACTACAAACTCAAACTGTTAATAGTACAACCGCGCCGCAGCCCAACTACATTCCGGGGCTGATTGCGGTGGTCGGGTGTGATGGCACCGGTAAATCCACACTGACCACCGACCTGGTGAAATCGCTGCAACAACACTGGCAAACCGAGCGGCGCTATCTGGGGCTGCTCTCCGGCGAAGACGGCGACAAAATCAAACGATTGCCGTTGGTTGGCGTCTGGCTGGAACGGCGACTGGCGGCCAAATCCTCGAAAACCCAAAGCATGAAAACCAAATCTCCGGCGCTATGGGCGGCGGTGATTATGTACTGCTTCTCGCTGCGAAGAATGGCGAATCTACGCAAGGTTCAGCGACTGGCGCAAAGTGGCGTTCTGGTGGTCAGCGATCGCTTCCCGCAGGCTGAAATTTCGGGCTTTTATTATGATGGACCGGGGATTGGCGTCGAACGTGCGACCGGGAAAATCAGCATGTTTCTGGCGCAGCGCGAACGGCGTTTATACCAACAAATGGCGCAATATCGCCCGGAATTAATTATTCGCCTGGGCATTGATATTGAGACTGCCATCTCCCGCAAGCCTGACCATGACTATGCCGAGCTGCAGGACAAAATCGGTGTCATGTCGAAGATTGGCTATAACGGCACAAAAATTCTTGAGATTGATTCCAGAGCGCCCTACAGCGAAGTGCTGGAACAGGCACAGAAGGCGGTTTCTCTGGTTGCCATCGTTTCTGACCGCCGAAGTTTAACTTAA", - "dna_sequence_length": 759, - "functions": [ - "putative ATP-binding protein" - ], - "id": "CDS_2938", - "location": [ - [ - "NC_000913", - 3133212, - "-", - 759 - ] - ], - "md5": "5cd2a338edba386968adc26ce89c5a7b", - "parent_gene": "", - "protein_md5": "d3f872f6275962a61c7099e106f9d8b7", - "protein_translation": "MDALQTQTVNSTTAPQPNYIPGLIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLAAKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLAQSGVLVVSDRFPQAEISGFYYDGPGIGVERATGKISMFLAQRERRLYQQMAQYRPELIIRLGIDIETAISRKPDHDYAELQDKIGVMSKIGYNGTKILEIDSRAPYSEVLEQAQKAVSLVAIVSDRRSLT", - "protein_translation_length": 252, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009793" - ], - [ - "gene_synonym", - "EcoGene:EG13003" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46843" - ], - [ - "gene_synonym", - "GeneID:947476" - ], - [ - "gene_synonym", - "ECK2979" - ], - [ - "gene_synonym", - "GI:16130885" - ], - [ - "gene_synonym", - "yghS" - ], - [ - "gene_synonym", - "b2985" - ], - [ - "gene_synonym", - "NP_417459.1" - ], - [ - "gene_synonym", - "JW5491" - ] - ], - "dna_sequence": "GTGAATCAACGTAATATGTCAATAATTAATTCCACGCCAGTGCGTGTTATTGCCATTGTAGGATGTGATGGTTCAGGTAAATCGACCCTCACGGCAAGCCTGGTAAATGAACTGGCAGCAAGAATGCCAACAGAACACATTTATCTCGGGCAATCGTCCGGGCGAATTGGCGAATGGATTTCACAGCTCCCTGTTATTGGCGCACCTTTTGGGCGTTATCTGCGAAGTAAAGCGGCACATGTGCACGAAAAGCCCTCAACACCGCCTGGCAATATTACTGCACTGGTTATCTATCTGCTTTCCTGCTGGCGGGCGTACAAGTTTCGCAAAATGTTGTGTAAAAGCCAGCAAGGCTTTCTGCTCATCACCGACCGCTACCCGCAGGTTGAAGTGCCGGGGTTTCGCTTTGATGGCCCGCAATTGGCAAAAACCACGGGCGGTAACGGTTGGATAAAAATGTTAAGGCAGCGCGAGCTGAAGCTGTACCAATGGATGGCATCTTATTTGCCCGTATTGTTGATTCGTCTTGGCATTGATGAACAAACCGCGTTTGCGCGTAAACCTGACCACCAACTGGCAGCGTTACAGGAAAAAATCGCCGTTACGCCGCAACTGACATTCAATGGCGCAAAGATCCTTGAACTGGATGGGCGACACCCCGCCGATGAAATTCTGCAAGCGTCACTACGCGCAATTCACGCCGCGCTTTCCTGA", - "dna_sequence_length": 714, - "functions": [ - "putative ATP-binding protein" - ], - "id": "CDS_2939", - "location": [ - [ - "NC_000913", - 3133957, - "-", - 714 - ] - ], - "md5": "89445a58a1ddd743a10e21e539a13e0a", - "parent_gene": "", - "protein_md5": "14397bad0fe6404df3a57617c0f01a46", - "protein_translation": "MNQRNMSIINSTPVRVIAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRSKAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKSQQGFLLITDRYPQVEVPGFRFDGPQLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFARKPDHQLAALQEKIAVTPQLTFNGAKILELDGRHPADEILQASLRAIHAALS", - "protein_translation_length": 237, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46844" - ], - [ - "gene_synonym", - "ECK2980" - ], - [ - "gene_synonym", - "NP_417460.1" - ], - [ - "gene_synonym", - "JW2954" - ], - [ - "gene_synonym", - "GI:16130886" - ], - [ - "gene_synonym", - "yghT" - ], - [ - "gene_synonym", - "b2986" - ], - [ - "gene_synonym", - "EcoGene:EG13004" - ], - [ - "gene_synonym", - "GeneID:947477" - ], - [ - "gene_synonym", - "ASAP:ABE-0009798" - ] - ], - "dna_sequence": "ATGCAGTCAATAACACCTCCATTAATTGCCGTTATTGGTAGCGATGGTTCAGGCAAGTCAACGGTGTGTGAACATCTTATTACCGTTGTCGAAAAATATGGTGCTGCCGAAAGAGTTCATTTAGGAAAACAGGCCGGAAATGTCGGTCGTGCAGTGACAAAATTACCGTTGATGGGAAAATCCTTACATAAAACAATTGAACGAAATCAGGTGAAAACAGCAAAAAAATTGCCTGGACCAGTTCCGGCGCTGGTAATTACAGCGTTTGTCGCCCGTCGCTTACTGCGCTTTCGTCATATGCTTGCCTGTCGTCGTCGCGGGTTAATTGTTCTAACCGACCGTTATCCTCAGGACCAAATTCCTGGCGCTTACGATGGTACGGTGTTCCCACCTAACGTTGAAGGTGGTCGTTTTGTCTCATGGCTGGCAAGCCAGGAACGTAAAGCGTTTCACTGGATGGCGAGCCATAAGCCTGATCTGGTCATCAAACTCAATGTTGACCTTGAAGTTGCCTGTGCACGTAAACCCGACCATAAACGGGAATCGCTGGCGAGGAAGATTGCCATAACGCCACAGTTAACCTTTGGTGGTGCACAACTGGTTGATATCGATGCCAATCAGCCACTGGAACAGGTGTTGGTTGATGCAGAAAAAGCGATTACGGATTTTATGACCGCGCGTGGTTATCACTAG", - "dna_sequence_length": 693, - "functions": [ - "putative ATP-binding protein" - ], - "id": "CDS_2940", - "location": [ - [ - "NC_000913", - 3134131, - "+", - 693 - ] - ], - "md5": "c5c9a3131405a7247ec270d1a042d16c", - "parent_gene": "", - "protein_md5": "af529da62c422464cec1a6ec4144108b", - "protein_translation": "MQSITPPLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIKLNVDLEVACARKPDHKRESLARKIAITPQLTFGGAQLVDIDANQPLEQVLVDAEKAITDFMTARGYH", - "protein_translation_length": 230, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12883" - ], - [ - "gene_synonym", - "ECK2981" - ], - [ - "gene_synonym", - "GeneID:947475" - ], - [ - "gene_synonym", - "ASAP:ABE-0009800" - ], - [ - "gene_synonym", - "GI:16130887" - ], - [ - "gene_synonym", - "b2987" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P43676" - ], - [ - "gene_synonym", - "NP_417461.1" - ], - [ - "gene_synonym", - "pitB" - ], - [ - "gene_synonym", - "JW2955" - ] - ], - "dna_sequence": "ATGCTAAATTTATTTGTTGGCCTTGATATATACACAGGGCTTTTGTTATTGCTTGCTCTGGCATTTGTGTTGTTCTACGAAGCAATCAATGGTTTTCATGACACGGCGAATGCGGTGGCAGCCGTTATTTATACTCGTGCCATGCAACCACAACTTGCTGTGGTGATGGCGGCATTTTTTAACTTTTTTGGCGTGTTATTGGGCGGACTTAGCGTTGCCTATGCCATTGTCCATATGTTGCCAACCGATTTGTTGCTGAATATGGGGTCAACCCACGGCCTGGCGATGGTCTTTTCCATGCTGCTGGCGGCGATTATCTGGAACCTGGGAACGTGGTTCTTCGGTTTACCGGCCTCCAGTTCGCACACCTTGATTGGTGCGATTATCGGCATCGGTTTAACCAACGCGCTGTTAACCGGCTCATCGGTGATGGATGCGTTAAACCTGCGTGAAGTGACCAAAATTTTCTCCTCGCTGATTGTTTCCCCTATCGTCGGCCTGGTCATTGCGGGAGGCCTGATATTCCTGCTGCGACGCTACTGGAGCGGGACGAAAAAGCGTGACCGTATTCACCGCATTCCGGAAGATCGCAAAAAGAAAAAAGGCAAACGTAAACCGCCATTCTGGACGCGTATTGCGCTGATTGTTTCCGCTGCGGGCGTGGCGTTTTCGCACGGCGCGAACGACGGACAAAAAGGGATCGGCCTGGTAATGCTGGTACTGGTGGGGATTGCCCCTGCTGGCTTCGTCGTCAATATGAATGCGTCCGGCTATGAAATTACCCGTACCCGCGATGCCGTTACCAACTTCGAACACTACCTGCAACAGCATCCTGAACTGCCGCAGAAGTTGATTGCGATGGAACCTCCATTGCCTGCAGCATCGACTGATGGCACGCAAGTAACAGAGTTTCACTGTCATCCGGCAAATACCTTTGATGCTATTGCGCGCGTTAAAACGATGCTGCCAGGCAATATGGAAAGTTACGAGCCGTTAAGCGTGAGTCAGCGCAGCCAGCTGCGCCGCATTATGCTGTGCATCTCTGATACCTCCGCGAAGCTAGCGAAACTGCCAGGCGTCAGTAAAGAAGACCAGAACCTGCTGAAAAAACTTCGCAGCGATATGTTAAGCACCATTGAGTACGCTCCGGTGTGGATCATCATGGCGGTAGCACTGGCGCTCGGCATTGGCACCATGATTGGCTGGCGTCGTGTAGCGATGACCATCGGTGAGAAGATTGGTAAGCGCGGCATGACGTATGCGCAAGGCATGGCGGCACAAATGACGGCGGCAGTGTCTATCGGTCTTGCCAGTTATATTGGGATGCCCGTCTCCACAACACACGTCCTCTCGTCTGCAGTTGCAGGGACGATGGTGGTGGACGGCGGTGGGTTACAGCGTAAAACGGTAACCAGCATCCTGATGGCGTGGGTATTTACTTTACCGGCGGCAATTTTTCTTTCTGGTGGGCTGTACTGGATAGCATTGCAGTTGATTTAA", - "dna_sequence_length": 1500, - "functions": [ - "phosphate transporter" - ], - "id": "CDS_2941", - "location": [ - [ - "NC_000913", - 3136371, - "-", - 1500 - ] - ], - "md5": "bcab0776d22f874fd379040acb6be4d0", - "parent_gene": "", - "protein_md5": "6172b58c5c135df201c48fa84ad539cc", - "protein_translation": "MLNLFVGLDIYTGLLLLLALAFVLFYEAINGFHDTANAVAAVIYTRAMQPQLAVVMAAFFNFFGVLLGGLSVAYAIVHMLPTDLLLNMGSTHGLAMVFSMLLAAIIWNLGTWFFGLPASSSHTLIGAIIGIGLTNALLTGSSVMDALNLREVTKIFSSLIVSPIVGLVIAGGLIFLLRRYWSGTKKRDRIHRIPEDRKKKKGKRKPPFWTRIALIVSAAGVAFSHGANDGQKGIGLVMLVLVGIAPAGFVVNMNASGYEITRTRDAVTNFEHYLQQHPELPQKLIAMEPPLPAASTDGTQVTEFHCHPANTFDAIARVKTMLPGNMESYEPLSVSQRSQLRRIMLCISDTSAKLAKLPGVSKEDQNLLKKLRSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVAMTIGEKIGKRGMTYAQGMAAQMTAAVSIGLASYIGMPVSTTHVLSSAVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAIFLSGGLYWIALQLI", - "protein_translation_length": 499, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12882" - ], - [ - "gene_synonym", - "gsp" - ], - [ - "gene_synonym", - "gss" - ], - [ - "gene_synonym", - "ECK2982" - ], - [ - "gene_synonym", - "ASAP:ABE-0009804" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AES0" - ], - [ - "gene_synonym", - "GeneID:947474" - ], - [ - "gene_synonym", - "NP_417462.1" - ], - [ - "gene_synonym", - "JW2956" - ], - [ - "gene_synonym", - "b2988" - ], - [ - "gene_synonym", - "GI:16130888" - ] - ], - "dna_sequence": "ATGAGCAAAGGAACGACCAGCCAGGATGCCCCGTTCGGGACATTATTGGGCTACGCCCCAGGTGGGGTAGCAATCTACTCTTCAGATTACAGTTCTCTCGATCCGCAGGAATACGAAGATGACGCCGTATTCCGTAGCTATATCGACGACGAATATATGGGCCACAAGTGGCAATGCGTTGAATTTGCTCGCCGTTTTCTCTTTCTGAATTACGGTGTGGTCTTTACTGACGTGGGTATGGCGTGGGAGATTTTCTCGCTGCGCTTCCTGCGAGAAGTGGTTAATGACAACATCCTGCCATTGCAGGCATTTCCTAACGGCTCGCCGCGTGCGCCGGTCGCGGGTGCGCTTCTTATCTGGGATAAAGGCGGTGAATTTAAAGACACTGGCCATGTCGCCATCATTACCCAATTGCATGGCAACAAAGTCCGTATTGCGGAACAGAACGTGATTCATTCCCCGTTGCCGCAAGGGCAACAGTGGACGCGCGAGCTGGAGATGGTGGTCGAAAACGGCTGCTATACCCTGAAAGACACTTTTGATGACACCACCATTCTGGGCTGGATGATCCAGACGGAAGATACTGAATACAGCTTACCGCAGCCGGAAATTGCAGGCGAGCTGCTGAAAATCAGCGGAGCGCGCCTGGAAAACAAAGGCCAGTTTGACGGTAAATGGCTGGATGAAAAAGATCCGCTGCAAAACGCCTATGTGCAGGCCAACGGTCAGGTGATCAATCAGGATCCTTATCATTACTACACCATTACCGAGAGTGCCGAGCAGGAGCTAATTAAAGCCACCAACGAGCTGCACCTGATGTATCTTCACGCAACCGACAAGGTGCTGAAAGATGACAACCTGCTGGCGCTGTTCGACATCCCGAAAATCCTCTGGCCACGTTTGCGTCTCTCCTGGCAGCGTCGCCGTCACCATATGATCACTGGTCGTATGGATTTCTGCATGGATGAGCGTGGCCTGAAGGTTTACGAGTACAACGCCGACTCCGCCTCCTGTCATACCGAAGCGGGCTTGATCCTCGAACGTTGGGCGGAGCAGGGCTATAAAGGCAACGGCTTCAATCCGGCGGAAGGGCTGATTAACGAATTGGCTGGTGCCTGGAAACACAGTCGTGCACGTCCGTTTGTCCATATCATGCAGGACAAAGATATCGAGGAAAACTATCACGCGCAGTTTATGGAGCAGGCGCTGCACCAGGCGGGCTTTGAAACGCGTATCTTGCGTGGATTGGATGAACTGGGCTGGGATGCTGCCGGGCAACTGATTGATGGGGAAGGGCGACTGGTTAACTGCGTGTGGAAAACCTGGGCGTGGGAAACCGCGTTTGATCAGATTCGTGAAGTTAGCGACCGTGAGTTTGCTGCGGTGCCAATCCGTACCGGTCATCCGCAAAACGAAGTGCGTCTTATCGACGTATTGCTGCGCCCGGAAGTGCTGGTCTTTGAGCCGCTGTGGACGGTGATCCCCGGCAACAAAGCGATTCTGCCGATCCTCTGGTCGCTGTTCCCGCACCATCGTTACCTGCTGGATACCGATTTCACTGTTAATGATGAACTGGTGAAAACAGGTTACGCAGTGAAACCGATCGCCGGTCGCTGTGGCAGCAATATCGACCTCGTCAGCCATCATGAAGAGGTGCTGGACAAAACCAGCGGTAAATTTGCCGAGCAGAAAAACATCTATCAGCAACTGTGGTGTTTGCCGAAAGTGGACGGTAAATACATTCAGGTATGTACCTTCACCGTTGGCGGCAACTACGGTGGGACGTGTTTGCGCGGTGATGAATCACTGGTCATCAAAAAAGAGAGTGATATTGAACCGTTAATTGTGGTGAAAAAGTAA", - "dna_sequence_length": 1860, - "functions": [ - "glutathionylspermidine amidase and glutathionylspermidine synthetase" - ], - "id": "CDS_2942", - "location": [ - [ - "NC_000913", - 3138522, - "-", - 1860 - ] - ], - "md5": "4cec01abacf403ba1a8797bad1a54c73", - "parent_gene": "", - "protein_md5": "1bec76be687a06418a3a114017a4ad6f", - "protein_translation": "MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVFRSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQAFPNGSPRAPVAGALLIWDKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQWTRELEMVVENGCYTLKDTFDDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLENKGQFDGKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMDERGLKVYEYNADSASCHTEAGLILERWAEQGYKGNGFNPAEGLINELAGAWKHSRARPFVHIMQDKDIEENYHAQFMEQALHQAGFETRILRGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQIREVSDREFAAVPIRTGHPQNEVRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVKK", - "protein_translation_length": 619, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46845" - ], - [ - "gene_synonym", - "ECK2983" - ], - [ - "gene_synonym", - "GI:90111524" - ], - [ - "gene_synonym", - "NP_417463.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0009812" - ], - [ - "gene_synonym", - "yghU" - ], - [ - "gene_synonym", - "EcoGene:EG13005" - ], - [ - "gene_synonym", - "b2989" - ], - [ - "gene_synonym", - "GeneID:947472" - ], - [ - "gene_synonym", - "JW5492" - ] - ], - "dna_sequence": "ATGACAGACAATACTTATCAGCCCGCGAAAGTCTGGACGTGGGATAAATCCGCTGGCGGCGCGTTCGCCAATATCAATCGCCCGGTTTCTGGTCCGACGCATGAAAAAACGCTGCCCGTTGGCAAACACCCATTGCAACTTTATTCGCTGGGAACGCCGAACGGTCAGAAAGTAACGATTATGCTTGAGGAGCTGCTGGCGCTGGGCGTTACTGGTGCAGAGTACGACGCCTGGCTGATTCGTATTGGCGATGGCGATCAATTCTCCAGCGGCTTTGTCGAAGTGAACCCAAACTCGAAGATCCCGGCGCTGCGCGATCATACGCATAATCCGCCGATCCGCGTGTTTGAATCTGGTTCGATCCTGCTTTATCTGGCGGAGAAATTTGGCTACTTCCTGCCGCAGGATTTGGCAAAGCGTACTGAAACGATGAACTGGCTGTTCTGGTTACAGGGCGCGGCACCGTTCCTCGGCGGTGGTTTTGGTCACTTTTACCATTACGCACCGGTAAAGATTGAGTACGCCATCAACCGCTTTACCATGGAAGCCAAACGTCTGCTCGACGTGCTGGATAAGCAACTGGCGCAGCATAAGTTTGTTGCGGGCGATGAGTACACCATTGCGGATATGGCGATTTGGCCGTGGTTTGGCAACGTGGTGTTAGGTGGTGTGTATGATGCCGCTGAGTTTCTTGATGCGGGCAGTTATAAGCATGTACAACGCTGGGCGAAAGAAGTAGGCGAACGTCCGGCGGTGAAACGTGGGCGTATTGTTAACCGCACCAACGGACCGCTGAATGAGCAGTTGCATGAGCGCCATGACGCCAGTGATTTCGAGACGAATACGGAAGATAAGCGTCAGGGGTAA", - "dna_sequence_length": 867, - "functions": [ - "putative S-transferase" - ], - "id": "CDS_2943", - "location": [ - [ - "NC_000913", - 3138727, - "+", - 867 - ] - ], - "md5": "87225b72cb1b9c2fb8e2c588589f10ba", - "parent_gene": "", - "protein_md5": "676d35389c27f40daf8cdec20faf357b", - "protein_translation": "MTDNTYQPAKVWTWDKSAGGAFANINRPVSGPTHEKTLPVGKHPLQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIPALRDHTHNPPIRVFESGSILLYLAEKFGYFLPQDLAKRTETMNWLFWLQGAAPFLGGGFGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGNVVLGGVYDAAEFLDAGSYKHVQRWAKEVGERPAVKRGRIVNRTNGPLNEQLHERHDASDFETNTEDKRQG", - "protein_translation_length": 288, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hybG" - ], - [ - "gene_synonym", - "NP_417464.1" - ], - [ - "gene_synonym", - "GeneID:948020" - ], - [ - "gene_synonym", - "JW2958" - ], - [ - "gene_synonym", - "ASAP:ABE-0009816" - ], - [ - "gene_synonym", - "b2990" - ], - [ - "gene_synonym", - "ECK2984" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAM7" - ], - [ - "gene_synonym", - "GI:16130890" - ], - [ - "gene_synonym", - "EcoGene:EG11805" - ] - ], - "dna_sequence": "ATGTGTATTGGCGTTCCAGGCCAGGTGCTGGCTGTCGGTGAAGATATTCACCAGCTTGCGCAGGTTGAAGTATGTGGTATCAAGCGCGATGTGAATATCGCCCTGATTTGTGAAGGTAACCCTGCCGATCTACTGGGCCAGTGGGTGCTGGTACACGTCGGATTTGCCATGAGCATCATCGACGAAGATGAAGCCAAAGCCACATTAGACGCACTGCGCCAAATGGATTACGACATTACCAGCGCGTGA", - "dna_sequence_length": 249, - "functions": [ - "hydrogenase 2 accessory protein" - ], - "id": "CDS_2944", - "location": [ - [ - "NC_000913", - 3139964, - "-", - 249 - ] - ], - "md5": "276c98663f62cd26ef8ad69a7f3dfbf1", - "parent_gene": "", - "protein_md5": "3799010f2d3257da5915e46316f35c2e", - "protein_translation": "MCIGVPGQVLAVGEDIHQLAQVEVCGIKRDVNIALICEGNPADLLGQWVLVHVGFAMSIIDEDEAKATLDALRQMDYDITSA", - "protein_translation_length": 82, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hybF" - ], - [ - "gene_synonym", - "ASAP:ABE-0009818" - ], - [ - "gene_synonym", - "b2991" - ], - [ - "gene_synonym", - "NP_417465.1" - ], - [ - "gene_synonym", - "ECK2985" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A703" - ], - [ - "gene_synonym", - "GI:16130891" - ], - [ - "gene_synonym", - "GeneID:948004" - ], - [ - "gene_synonym", - "JW5493" - ], - [ - "gene_synonym", - "EcoGene:EG11804" - ] - ], - "dna_sequence": "ATGCATGAGTTGTCTCTTTGCCAGAGCGCCGTTGAAATTATCCAACGGCAGGCGGAGCAGCACGATGTTAAGCGCGTCACCGCCGTGTGGCTGGAAATTGGCGCGCTCTCCTGCGTTGAGGAGAGCGCCGTCCGTTTTAGTTTTGAAATTGTCTGCCACGGAACGGTGGCGCAAGGGTGCGATTTACATATCGTCTATAAACCCGCCCAGGCTTGGTGCTGGGATTGCAGCCAGGTGGTGGAGATTCATCAGCACGATGCGCAGTGTCCGCTCTGTCACGGCGAGCGGTTGCGTGTCGATACCGGCGATTCGCTGATCGTCAAAAGTATTGAAGTTGAATAA", - "dna_sequence_length": 342, - "functions": [ - "protein involved with the maturation of hydrogenases 1 and 2" - ], - "id": "CDS_2945", - "location": [ - [ - "NC_000913", - 3140318, - "-", - 342 - ] - ], - "md5": "eb2a3c2a9500e21933a3fa6db8cea8f0", - "parent_gene": "", - "protein_md5": "488b64d8d7d1d62b8dc4c69da2641139", - "protein_translation": "MHELSLCQSAVEIIQRQAEQHDVKRVTAVWLEIGALSCVEESAVRFSFEIVCHGTVAQGCDLHIVYKPAQAWCWDCSQVVEIHQHDAQCPLCHGERLRVDTGDSLIVKSIEVE", - "protein_translation_length": 113, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hybE" - ], - [ - "gene_synonym", - "JW2960" - ], - [ - "gene_synonym", - "ASAP:ABE-0009824" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAN1" - ], - [ - "gene_synonym", - "ECK2986" - ], - [ - "gene_synonym", - "NP_417466.1" - ], - [ - "gene_synonym", - "GI:16130892" - ], - [ - "gene_synonym", - "GeneID:947483" - ], - [ - "gene_synonym", - "EcoGene:EG11803" - ], - [ - "gene_synonym", - "b2992" - ] - ], - "dna_sequence": "ATGACTGAAGAGATAGCAGGTTTCCAGACCTCCCCGAAGGCGCAAGTACAGGCAGCGTTTGAAGAAATTGCCCGGCGTTCGATGCACGATCTCTCTTTTCTGCATCCTTCAATGCCGGTGTATGTTTCTGATTTTACGCTGTTCGAAGGTCAGTGGACGGGGTGTGTGATCACCCCGTGGATGCTGAGTGCAGTTATCTTCCCCGGCCCGGATCAACTCTGGCCGCTGCGCAAAGTGAGTGAAAAAATTGGTCTGCAACTGCCGTATGGCACTATGACCTTTACCGTTGGCGAACTGGACGGTGTTTCGCAATATCTCTCCTGTTCGCTGATGTCGCCGCTTTCGCACAGCATGTCGATTGAAGAGGGCCAACGCCTGACGGATGACTGCGCACGAATGATCCTTTCGCTGCCAGTCACGAATCCGGATGTACCACACGCAGGGCGTCGCGCCCTGCTGTTTGGTCGCAGGAGTGGCGAAAATGCATGA", - "dna_sequence_length": 489, - "functions": [ - "hydrogenase 2-specific chaperone" - ], - "id": "CDS_2946", - "location": [ - [ - "NC_000913", - 3140799, - "-", - 489 - ] - ], - "md5": "ac28a7fc857b48c0ec910396d13db728", - "parent_gene": "", - "protein_md5": "d3def59d2540f906d8b31bd384435782", - "protein_translation": "MTEEIAGFQTSPKAQVQAAFEEIARRSMHDLSFLHPSMPVYVSDFTLFEGQWTGCVITPWMLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGVSQYLSCSLMSPLSHSMSIEEGQRLTDDCARMILSLPVTNPDVPHAGRRALLFGRRSGENA", - "protein_translation_length": 162, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37182" - ], - [ - "gene_synonym", - "hybD" - ], - [ - "gene_synonym", - "JW2961" - ], - [ - "gene_synonym", - "GeneID:948982" - ], - [ - "gene_synonym", - "ECK2987" - ], - [ - "gene_synonym", - "NP_417467.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009826" - ], - [ - "gene_synonym", - "GI:16130893" - ], - [ - "gene_synonym", - "EcoGene:EG11802" - ], - [ - "gene_synonym", - "b2993" - ] - ], - "dna_sequence": "ATGCGTATTTTAGTCTTAGGGGTCGGCAATATTTTGCTGACCGATGAAGCCATCGGTGTGCGGATTGTCGAAGCGTTAGAGCAACGATACATTCTGCCGGATTATGTTGAGATCCTCGATGGCGGCACGGCGGGAATGGAGCTGCTTGGCGACATGGCAAATCGCGATCATTTGATTATTGCGGATGCCATTGTCTCGAAAAAGAACGCGCCGGGAACGATGATGATCCTGCGGGATGAAGAAGTTCCGGCGTTGTTTACCAACAAAATCTCTCCGCATCAGCTTGGCCTGGCCGACGTCTTGTCGGCCCTGCGCTTCACCGGCGAGTTTCCGAAAAAGCTGACCCTGGTCGGCGTGATCCCGGAATCGCTGGAGCCACACATCGGCTTAACGCCGACGGTTGAAGCAATGATTGAACCTGCGCTTGAGCAGGTTCTGGCTGCGCTGCGTGAATCTGGCGTGGAAGCCATCCCACGGGAGGCGATTCATGACTGA", - "dna_sequence_length": 495, - "functions": [ - "maturation protease for hydrogenase 2" - ], - "id": "CDS_2947", - "location": [ - [ - "NC_000913", - 3141286, - "-", - 495 - ] - ], - "md5": "78da0ffebe953eb0cfbdd23cf54f5f66", - "parent_gene": "", - "protein_md5": "6b8d2f28091535c5185ecdc941bd4798", - "protein_translation": "MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTAGMELLGDMANRDHLIIADAIVSKKNAPGTMMILRDEEVPALFTNKISPHQLGLADVLSALRFTGEFPKKLTLVGVIPESLEPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPREAIHD", - "protein_translation_length": 164, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2988" - ], - [ - "gene_synonym", - "JW2962" - ], - [ - "gene_synonym", - "EcoGene:EG11801" - ], - [ - "gene_synonym", - "GI:16130894" - ], - [ - "gene_synonym", - "b2994" - ], - [ - "gene_synonym", - "GeneID:945182" - ], - [ - "gene_synonym", - "hybC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACE0" - ], - [ - "gene_synonym", - "ASAP:ABE-0009828" - ], - [ - "gene_synonym", - "NP_417468.1" - ] - ], - "dna_sequence": "ATGAGCCAGAGAATTACTATTGATCCGGTAACCCGTATTGAGGGGCATTTACGCATCGATTGCGAAATCGAAAATGGCGTCGTTTCGAAAGCATGGGCTTCCGGTACCATGTGGCGCGGCATGGAAGAGATCGTGAAAAACCGCGATCCGCGCGATGCATGGATGATTGTGCAACGTATCTGTGGCGTATGTACTACCACTCACGCGCTGTCTTCCGTTCGTGCGGCAGAAAGTGCGCTGAATATCGACGTTCCGGTTAACGCGCAATACATCCGTAACATCATTCTGGCTGCGCACACCACGCATGACCATATTGTTCATTTCTATCAGCTTTCGGCGCTGGACTGGGTGGACATCACTTCTGCACTGCAAGCTGACCCAACCAAAGCCTCCGAAATGCTGAAAGGCGTTTCGACCTGGCACCTGAACAGTCCGGAAGAGTTCACCAAAGTTCAGAACAAGATCAAAGATCTGGTTGCCAGCGGTCAGTTGGGTATTTTCGCTAATGGCTACTGGGGTCATCCGGCGATGAAACTGCCGCCGGAAGTGAACCTGATTGCGGTAGCGCACTACCTGCAAGCGTTGGAGTGCCAGCGTGACGCTAACCGCGTCGTGGCGCTGCTGGGCGGTAAAACGCCGCACATTCAGAACCTGGCGGTAGGTGGTGTCGCGAACCCGATCAACCTCGACGGTTTGGGCGTGCTGAACCTTGAGCGCCTGATGTACATCAAGTCTTTCATCGACAAACTGAGCGACTTTGTTGAGCAGGTTTATAAGGTTGATACCGCAGTTATTGCCGCGTTCTACCCGGAATGGCTGACACGCGGTAAAGGTGCGGTGAACTACCTGAGCGTGCCGGAATTCCCGACCGACAGTAAAAACGGCAGCTTCCTGTTCCCGGGCGGCTACATTGAGAATGCGGATCTGTCCTCGTATCGTCCGATCACTTCTCATTCCGATGAATACCTGATCAAAGGCATTCAGGAAAGCGCGAAGCACTCCTGGTATAAAGACGAAGCGCCGCAGGCACCGTGGGAAGGCACCACCATTCCGGCTTATGATGGTTGGTCTGACGACGGGAAATATTCCTGGGTGAAATCACCGACTTTCTACGGCAAAACGGTAGAAGTGGGGCCACTGGCTAATATGCTGGTGAAACTGGCGGCAGGTCGCGAATCTACCCAGAACAAACTGAATGAAATCGTTGCGATTTATCAGAAACTGACTGGCAACACGCTGGAAGTGGCACAGCTGCACTCCACGCTGGGCCGTATTATTGGTCGTACCGTTCACTGCTGTGAATTGCAGGATATCCTGCAAAACCAATACAGTGCACTGATCACCAATATCGGCAAAGGCGATCACACCACCTTTGTGAAGCCGAACATTCCGGCAACGGGTGAATTCAAAGGTGTTGGCTTCCTCGAAGCGCCGCGCGGTATGCTCTCTCACTGGATGGTTATTAAAGACGGTATCATCAGCAACTACCAGGCGGTTGTTCCATCAACCTGGAACTCTGGTCCGCGTAACTTCAATGATGACGTCGGTCCTTACGAGCAGTCGCTGGTGGGTACACCGGTTGCCGATCCGAATAAACCGCTGGAAGTGGTGCGTACCATTCACTCCTTTGACCCGTGCATGGCCTGTGCGGTACACGTAGTGGATGCTGACGGCAACGAAGTGGTTTCAGTGAAGGTTCTGTAA", - "dna_sequence_length": 1704, - "functions": [ - "hydrogenase 2, large subunit" - ], - "id": "CDS_2948", - "location": [ - [ - "NC_000913", - 3142989, - "-", - 1704 - ] - ], - "md5": "8c3535c939a44ab1b0d8b02f59e1c9b6", - "parent_gene": "", - "protein_md5": "d90a1ebb127f654db3d4a7c56ce5df07", - "protein_translation": "MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEIVKNRDPRDAWMIVQRICGVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTHDHIVHFYQLSALDWVDITSALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVASGQLGIFANGYWGHPAMKLPPEVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNLAVGGVANPINLDGLGVLNLERLMYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRGKGAVNYLSVPEFPTDSKNGSFLFPGGYIENADLSSYRPITSHSDEYLIKGIQESAKHSWYKDEAPQAPWEGTTIPAYDGWSDDGKYSWVKSPTFYGKTVEVGPLANMLVKLAAGRESTQNKLNEIVAIYQKLTGNTLEVAQLHSTLGRIIGRTVHCCELQDILQNQYSALITNIGKGDHTTFVKPNIPATGEFKGVGFLEAPRGMLSHWMVIKDGIISNYQAVVPSTWNSGPRNFNDDVGPYEQSLVGTPVADPNKPLEVVRTIHSFDPCMACAVHVVDADGNEVVSVKVL", - "protein_translation_length": 567, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37180" - ], - [ - "gene_synonym", - "ECK2989" - ], - [ - "gene_synonym", - "EcoGene:EG11800" - ], - [ - "gene_synonym", - "b2995" - ], - [ - "gene_synonym", - "hybB" - ], - [ - "gene_synonym", - "GeneID:948615" - ], - [ - "gene_synonym", - "NP_417469.1" - ], - [ - "gene_synonym", - "GI:16130895" - ], - [ - "gene_synonym", - "ASAP:ABE-0009830" - ], - [ - "gene_synonym", - "JW5494" - ] - ], - "dna_sequence": "ATGAGTCATGATCCACAACCGCTGGGCGGCAAAATCATCAGTAAACCGGTCATGATTTTTGGACCGTTAATCGTCATCTGTATGCTCCTGATTGTGAAGCGTCTGGTGTTCGGTCTGGGCTCTGTCTCTGACCTGAACGGCGGCTTCCCGTGGGGCGTGTGGATCGCGTTTGACCTGCTGATTGGCACCGGCTTTGCCTGTGGCGGCTGGGCGCTGGCGTGGGCGGTATACGTCTTTAACCGTGGGCAATACCATCCGCTGGTGCGTCCGGCGCTGTTGGCGAGTCTGTTTGGTTACTCACTGGGTGGCTTGTCGATCACTATCGACGTGGGTCGCTACTGGAACCTGCCGTACTTCTACATTCCGGGTCACTTCAACGTGAACTCGGTACTGTTCGAGACGGCGGTCTGTATGACCATCTATATCGGCGTGATGGCACTGGAGTTTGCTCCGGCACTGTTTGAACGTCTGGGGTGGAAGGTGTCGCTACAGCGACTAAACAAGGTGATGTTCTTCATCATCGCGCTCGGTGCGCTGCTGCCGACCATGCACCAGTCTTCAATGGGGTCGCTGATGATCTCGGCGGGCTACAAGGTGCATCCGTTGTGGCAGAGCTATGAAATGTTGCCGCTGTTCTCGCTGCTGACGGCGTTCATCATGGGCTTCTCGATTGTCATCTTTGAAGGTTCGCTGGTGCAGGCGGGTCTGCGTGGCAACGGTCCGGATGAAAAGAGTCTGTTTGTTAAGCTGACCAACACCATCAGTGTGTTGCTGGCGATTTTCATCGTGCTGCGCTTTGGCGAGCTTATCTATCGCGACAAGCTGTCGTTAGCGTTTGCCGGTGACTTCTACTCCGTGATGTTCTGGATTGAAGTCCTGCTGATGCTCTTCCCGCTGGTCGTTCTGCGTGTGGCGAAGCTGCGTAATGATTCCCGCATGCTGTTCCTGTCAGCACTGAGCGCACTGTTAGGTTGTGCAACCTGGCGTCTGACCTATTCGCTGGTGGCATTCAACCCGGGCGGCGGTTACGCCTACTTCCCGACCTGGGAAGAACTGTTGATTTCTATTGGTTTTGTGGCTATTGAGATTTGCGCTTACATCGTACTCATTCGTCTACTGCCGATACTTCCTCCTTTAAAACAAAACGATCATAATCGTCATGAGGCGAGCAAAGCATGA", 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"ECK2990" - ], - [ - "gene_synonym", - "EcoGene:EG11799" - ], - [ - "gene_synonym", - "GI:16130896" - ], - [ - "gene_synonym", - "ASAP:ABE-0009832" - ], - [ - "gene_synonym", - "b2996" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAJ8" - ], - [ - "gene_synonym", - "hydL" - ] - ], - "dna_sequence": "GTGAACAGACGTAATTTTATTAAAGCAGCCTCCTGCGGGGCATTGCTGACGGGCGCGCTGCCGTCTGTCAGTCATGCGGCTGCTGAAAACCGCCCGCCAATTCCGGGATCGCTGGGGATGTTGTACGACTCGACCTTGTGCGTAGGCTGCCAGGCTTGCGTCACCAAGTGTCAGGATATCAATTTCCCTGAACGTAACCCGCAAGGGGAACAGACCTGGTCGAACAACGACAAACTGTCGCCGTATACCAATAACATCATTCAGGTGTGGACCAGCGGCACAGGGGTCAACAAAGACCAGGAGGAGAACGGCTACGCGTACATTAAGAAACAGTGTATGCACTGCGTCGATCCGAACTGTGTCTCTGTGTGCCCGGTCTCTGCACTGAAAAAAGATCCGAAAACCGGCATTGTCCATTACGACAAAGATGTGTGCACCGGCTGCCGTTACTGCATGGTCGCCTGTCCGTACAACGTGCCGAAGTACGACTACAACAACCCGTTTGGTGCGCTGCATAAGTGCGAGCTGTGCAACCAGAAAGGTGTGGAACGTCTCGATAAAGGCGGTCTACCTGGCTGCGTAGAAGTGTGCCCGGCGGGCGCGGTGATTTTCGGTACGCGTGAAGAGCTGATGGCGGAGGCGAAAAAACGTCTGGCGCTGAAGCCTGGCAGCGAATACCACTATCCGCGTCAGACGCTGAAATCTGGCGACACTTACCTGCATACGGTGCCGAAATATTATCCGCATCTGTACGGCGAGAAAGAGGGCGGCGGTACTCAGGTTCTGGTACTGACGGGTGTGCCTTATGAAAATCTCGACCTGCCGAAACTGGACGATCTTTCTACCGGTGCGCGTTCCGAAAATATTCAACACACCCTGTATAAAGGCATGATGCTACCACTGGCTGTGCTGGCGGGCTTAACCGTGCTGGTTCGTCGCAACACCAAAAACGACCATCACGACGGAGGAGACGATCATGAGTCATGA", - "dna_sequence_length": 987, - "functions": [ - "hydrogenase 2 4Fe-4S ferredoxin-type component" - ], - "id": "CDS_2950", - "location": [ - [ - "NC_000913", - 3145140, - "-", - 987 - ] - ], - "md5": "057d04b7e57d891486aed8361dd81634", - "parent_gene": "", - "protein_md5": "68fae63339caa66a8e8a0285af7d95a0", - "protein_translation": "MNRRNFIKAASCGALLTGALPSVSHAAAENRPPIPGSLGMLYDSTLCVGCQACVTKCQDINFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQEENGYAYIKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVPKYDYNNPFGALHKCELCNQKGVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRLALKPGSEYHYPRQTLKSGDTYLHTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPKLDDLSTGARSENIQHTLYKGMMLPLAVLAGLTVLVRRNTKNDHHDGGDDHES", - "protein_translation_length": 328, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130897" - ], - [ - "gene_synonym", - "JW2965" - ], - [ - "gene_synonym", - "ASAP:ABE-0009834" - ], - [ - "gene_synonym", - "hybO" - ], - [ - "gene_synonym", - "ECK2991" - ], - [ - "gene_synonym", - "b2997" - ], - [ - "gene_synonym", - "GeneID:945902" - ], - [ - "gene_synonym", - "NP_417471.1" - ], - [ - "gene_synonym", - "yghV" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69741" - ], - [ - "gene_synonym", - "EcoGene:EG13006" - ] - ], - "dna_sequence": "ATGACTGGAGATAACACCCTCATCCATTCTCACGGCATTAACCGTCGTGATTTCATGAAGCTTTGTGCAGCATTAGCCGCCACCATGGGGTTAAGTAGCAAAGCCGCTGCAGAGATGGCCGAATCGGTTACTAACCCGCAGCGTCCGCCAGTTATCTGGATTGGCGCGCAGGAGTGCACCGGTTGTACGGAATCTCTGCTTCGTGCAACGCATCCAACGGTAGAAAACCTCGTACTGGAGACTATCTCTCTGGAGTATCACGAAGTGCTTTCCGCCGCCTTCGGTCATCAGGTCGAAGAGAACAAACATAACGCTCTCGAGAAGTACAAAGGGCAGTATGTGTTAGTGGTGGATGGTTCCATCCCATTAAAAGATAACGGTATTTATTGCATGGTTGCCGGTGAGCCGATTGTGGATCACATCCGCAAAGCGGCGGAAGGCGCAGCAGCCATTATCGCTATCGGTTCCTGCTCTGCGTGGGGCGGTGTTGCCGCAGCTGGAGTTAACCCAACTGGCGCAGTCAGCCTGCAAGAAGTTCTGCCAGGCAAAACCGTTATCAATATTCCGGGCTGCCCGCCGAACCCGCACAACTTCCTCGCGACCGTTGCGCACATCATCACTTACGGCAAACCGCCGAAACTGGATGACAAAAACCGTCCGACCTTCGCCTATGGCCGTCTGATTCACGAACACTGCGAACGTCGCCCGCACTTCGATGCTGGTCGTTTTGCCAAAGAGTTCGGTGATGAAGGCCACCGCGAAGGCTGGTGCCTGTACCACCTCGGCTGTAAAGGGCCAGAAACTTACGGCAACTGCTCAACGCTGCAATTCTGCGATGTTGGCGGTGTGTGGCCGGTGGCGATTGGTCACCCTTGCTATGGCTGTAACGAAGAAGGTATCGGCTTCCATAAAGGCATCCATCAGCTTGCCAACGTCGAAAATCAAACTCCGCGTTCACAGAAACCGGATGTTAACGCTAAAGAGGGCGGCAACGTCTCTGCAGGCGCTATTGGTTTGCTCGGCGGTGTGGTTGGGTTGGTTGCCGGTGTCAGCGTGATGGCGGTGCGTGAACTGGGTCGTCAGCAAAAGAAAGATAACGCTGACTCACGGGGAGAATAA", 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- [ - "gene_synonym", - "yghW" - ], - [ - "gene_synonym", - "NP_417472.1" - ], - [ - "gene_synonym", - "b2998" - ], - [ - "gene_synonym", - "EcoGene:EG13007" - ], - [ - "gene_synonym", - "GI:16130898" - ] - ], - "dna_sequence": "ATGAATAACCATTTTGGTAAAGGCTTAATGGCGGGATTAAAAGCAACGCATGCCGACAGTGCGGTTAATGTGACAAAATTCTGTGCCGATTATAAACGCGGTTTTGTATTAGGCTACTCACACCGGATGTACGAAAAGACCGGAGATCGCCAGCTTAGCGCCTGGGAAGCGGGTATTCTGACGCGCCGCTATGGACTGGATAAAGAGATGGTAATGGATTTCTTTCGTGAGAATAATTCCTGTTCTACGTTGCGCTTTTTTATGGCCGGTTATCGCCTCGAAAATTGA", - "dna_sequence_length": 288, - "functions": [ - "DUF2623 family protein" - ], - "id": "CDS_2952", - "location": [ - [ - "NC_000913", - 3146737, - "-", - 288 - ] - ], - "md5": "0ce20ef7c848d1029e6abdf5c62d50df", - "parent_gene": "", - "protein_md5": "f462ced71b96ba4ecec883716611ad36", - "protein_translation": "MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMYEKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN", - "protein_translation_length": 95, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009842" - ], - [ - "gene_synonym", - "b4658" - ], - [ - "gene_synonym", - "ASAP:ABE-0009844" - ], - [ - "gene_synonym", - "ECK2993" - ], - [ - "gene_synonym", - "GeneID:2847694" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q7DFU6" - ], - [ - "gene_synonym", - "JW5926" - ], - [ - "gene_synonym", - "EcoGene:EG13008" - ], - [ - "gene_synonym", - "yghX" - ], - [ - "gene_synonym", - "yghY" - ] - ], - "dna_sequence": "ATGACTATTACGCTCACGGGAAAATCTCGAAACGTGAGTTCCTCAACCTTGCGGCGAAGTGCGGTAGGCGGGATGACGGCATTAGCGTTGTTTGATTTGCTCAAGCCAAATTATGCGCTGGCGACTCAGGTAGAGTTTACCGACCCGGAAATTGTTGCTGAGTACATCACGTATCCTTCGCCAAATGGTCACGGCGAGGTGCGGGGTTATCTGGTGAAGCCCGCAAAGATGAGCGGCAAAACGCCAGCCGTAGTGGTGGTGCATGAGAATCGTGGACTGAATCCGTATATCGAAGATGTGGCACGGCGAGTGGCGAAGGCGGGGTATATCGCCCTGGCACCTGACGGCTTAAGTTCCGTTGGAGGTTATCCGGGAAATGATGATAAAGGTCGTGAGCTGCAACAGCAGGTTGATCCAACAAAACTGATGAATGATTTCTTTGCCGCAATTGAGTTTATGCAACGCTATCCGCAAGCGACAGGCAAAGTGGGTATTACCGGATTTTGCTATGGCGGTGGCGTATCGAACGCGGCGGCTGTCGCGTATCCGGAACTGGCCTGCGCGGTGCCGTTTTATGGTCGTCAGGCACCCACTGCCGATGTGGCGAAGATTGAAGCGCCTTTACTACTCCACTTCGCGGAACTGGACACCCGAATCAACGAGGGCTGGCCTGCTTACGAGGCGGCGTTGAAAGCCAATAATAAGGTTTATGAGGCGTATATCTATCCGGGGGTTAATCACGGATTCCATAATGATTCCACGCCCCGTTATGACAAATCTGCCGCCGATCTTGCCTGGCAAAGGACACTGAAATGGTTCGATAAATATCTCTCCTGA", - "dna_sequence_length": 837, - "id": "CDS_2953", - "location": [ - [ - "NC_000913", - 3147691, - "-", - 420 - ], - [ - "NC_000913", - 3147272, - "-", - 417 - ] - ], - "md5": "47976eeceb67465081c47395d0bbc7b7", - "parent_gene": "", - "protein_md5": "1fae68fb48e60cd0cd38976b99e95e35", - "protein_translation": "MTITLTGKSRNVSSSTLRRSAVGGMTALALFDLLKPNYALATQVEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVVVVHENRGLNPYIEDVARRVAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTKLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQAPTADVAKIEAPLLLHFAELDTRINEGWPAYEAALKANNKVYEAYIYPGVNHGFHNDSTPRYDKSAADLAWQRTLKWFDKYLS", - "protein_translation_length": 278, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3001" - ], - [ - "gene_synonym", - "JW2970" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46851" - ], - [ - "gene_synonym", - "ASAP:ABE-0009848" - ], - [ - "gene_synonym", - "ECK2995" - ], - [ - "gene_synonym", - "mgrA" - ], - [ - "gene_synonym", - "NP_417474.1" - ], - [ - "gene_synonym", - "GI:16130899" - ], - [ - "gene_synonym", - "yghZ" - ], - [ - "gene_synonym", - "EcoGene:EG13010" - ], - [ - "gene_synonym", - "gpr" - ], - [ - "gene_synonym", - "GeneID:947480" - ] - ], - "dna_sequence": "ATGGTCTGGTTAGCGAATCCCGAACGTTACGGGCAGATGCAATACCGCTATTGCGGAAAAAGTGGTTTACGCCTGCCCGCGTTATCGCTCGGTTTATGGCACAATTTCGGTCACGTTAACGCGCTGGAATCACAGCGTGCGATCCTGCGTAAAGCGTTTGATTTGGGCATTACGCACTTTGATTTAGCCAACAATTACGGGCCGCCTCCAGGAAGCGCAGAAGAGAACTTTGGTCGCCTGCTGCGGGAGGATTTTGCCGCTTATCGCGATGAACTGATTATCTCTACCAAGGCTGGCTACGATATGTGGCCCGGCCCTTACGGCTCTGGCGGTTCACGTAAATACCTGCTCGCCAGCCTCGACCAAAGCCTGAAGCGTATGGGGCTTGAGTATGTCGATATCTTTTACTCTCATCGCGTCGATGAAAATACGCCGATGGAAGAAACCGCCTCTGCGCTGGCTCATGCGGTACAAAGCGGTAAGGCGCTGTATGTCGGGATCTCCTCTTACTCGCCAGAGCGGACGCAAAAAATGGTCGAGTTGCTGCGCGAGTGGAAAATTCCGCTGTTAATTCATCAACCTTCGTACAATTTACTGAACCGCTGGGTGGATAAAAGCGGCCTGCTGGATACCCTGCAAAATAACGGCGTGGGCTGTATTGCCTTTACTCCTCTGGCTCAGGGATTGCTGACCGGAAAATATCTCAACGGCATTCCGCAAGATTCACGGATGCATCGTGAAGGGAATAAAGTTCGTGGTCTGACACCGAAAATGCTTACCGAAGCCAACCTCAACAGCCTGCGCTTATTGAATGAAATGGCACAGCAGCGTGGACAATCAATGGCGCAAATGGCGTTAAGCTGGTTGCTGAAAGATGATCGCGTGACGTCGGTATTGATTGGTGCCAGCCGCGCGGAGCAACTAGAGGAGAACGTGCAGGCGCTGAATAATCTGACATTTAGCACCAAGGAGCTGGCGCAGATTGATCAGCATATCGCCGATGGCGAGCTGAATCTGTGGCAGGCGTCTTCCGATAAATGA", 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"UniProtKB/Swiss-Prot:P67244" - ], - [ - "gene_synonym", - "ECK2996" - ], - [ - "gene_synonym", - "NP_417475.1" - ], - [ - "gene_synonym", - "yqhA" - ], - [ - "gene_synonym", - "EcoGene:EG13011" - ] - ], - "dna_sequence": "ATGGAACGTTTTCTTGAAAATGCAATGTATGCTTCTCGCTGGCTGCTTGCCCCCGTGTACTTTGGCCTTTCGCTGGCGTTAGTTGCCCTGGCGCTGAAGTTCTTCCAGGAGATTATTCACGTACTGCCGAATATCTTCTCGATGGCGGAATCAGATTTGATCCTCGTGTTGCTGTCGCTGGTGGATATGACGCTGGTTGGCGGTTTGCTGGTGATGGTGATGTTTTCCGGTTATGAGAATTTCGTCTCACAGCTGGATATCTCCGAGAACAAAGAGAAGCTGAACTGGCTGGGGAAAATGGACGCAACGTCGCTGAAAAACAAAGTAGCAGCGTCGATTGTGGCAATTTCTTCCATTCACTTACTGCGCGTCTTTATGGATGCGAAAAATGTCCCGGATAACAAACTGATGTGGTACGTCATTATCCATCTGACGTTTGTGCTTTCTGCATTTGTGATGGGCTATCTTGACCGACTGACTCGTCATAATCACTGA", - "dna_sequence_length": 495, - "functions": [ - "UPF0114 family putative inner membrane protein" - ], - "id": "CDS_2955", - "location": [ - [ - "NC_000913", - 3149471, - "-", - 495 - ] - ], - "md5": "c077a8088eca9a0d41643724a623385d", - "parent_gene": "", - "protein_md5": "ea52332cb2bb7fff6c16aee08c7f9baf", - "protein_translation": "MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPNIFSMAESDLILVLLSLVDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDATSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLTRHNH", - "protein_translation_length": 164, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yghA" - ], - [ - "gene_synonym", - "GI:16130901" - ], - [ - "gene_synonym", - "NP_417476.1" - ], - [ - "gene_synonym", - "JW2972" - ], - [ - "gene_synonym", - "ASAP:ABE-0009859" - ], - [ - "gene_synonym", - "b3003" - ], - [ - "gene_synonym", - "ECK2997" - ], - [ - "gene_synonym", - "GeneID:947478" - ], - [ - "gene_synonym", - "EcoGene:EG11292" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG84" - ] - ], - "dna_sequence": "ATGTCTCATTTAAAAGACCCGACCACGCAGTATTACACTGGTGAATATCCCAAACAGAAACAACCGACGCCAGGCATCCAGGCGAAGATGACACCGGTACCGGATTGCGGCGAGAAAACCTATGTTGGTAGCGGTCGCCTGAAAGATCGTAAAGCACTGGTGACAGGGGGCGATTCCGGAATAGGTCGCGCTGCCGCCATCGCTTACGCGCGTGAAGGGGCTGACGTGGCGATCAGTTATCTTCCCGTGGAAGAAGAAGACGCTCAGGATGTGAAAAAGATCATTGAAGAATGCGGACGCAAAGCCGTTCTGCTGCCAGGCGATTTAAGCGATGAGAAATTTGCCCGTTCGCTGGTTCACGAAGCGCACAAGGCGTTAGGCGGGCTGGATATTATGGCGCTGGTCGCCGGGAAACAGGTTGCCATTCCGGATATTGCAGACCTCACCAGCGAACAGTTTCAAAAGACCTTTGCCATTAACGTTTTCGCGCTGTTCTGGCTAACCCAGGAAGCGATCCCCCTGCTACCGAAAGGTGCAAGTATCATCACCACTTCGTCAATCCAGGCATACCAGCCAAGTCCGCATTTACTGGACTATGCGGCTACGAAGGCGGCGATTCTGAACTACAGCCGTGGCTTGGCAAAACAGGTCGCGGAGAAAGGTATTCGGGTGAATATTGTCGCGCCAGGCCCGATCTGGACAGCACTGCAAATTTCCGGCGGACAAACGCAGGATAAGATCCCGCAGTTTGGTCAGCAAACGCCGATGAAACGTGCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAA", - "dna_sequence_length": 885, - "functions": [ - "putative oxidoreductase" - ], - "id": "CDS_2956", - "location": [ - [ - "NC_000913", - 3149662, - "+", - 885 - ] - ], - "md5": "10bdde94623f0926d1e335eecad430a9", - "parent_gene": "", - "protein_md5": "71b366fee434d27c10f65222f4cb5ea6", - "protein_translation": "MSHLKDPTTQYYTGEYPKQKQPTPGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHLG", - "protein_translation_length": 294, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK2998" - ], - [ - "gene_synonym", - "NP_417478.1" - ], - [ - "gene_synonym", - "JW2973" - ], - [ - "gene_synonym", - "GI:16130903" - ], - [ - "gene_synonym", - "b3005" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABV2" - ], - [ - "gene_synonym", - "ASAP:ABE-0009866" - ], - [ - "gene_synonym", - "GeneID:946345" - ], - [ - "gene_synonym", - "exbD" - ], - [ - "gene_synonym", - "EcoGene:EG10272" - ] - ], - "dna_sequence": "ATGGCAATGCATCTTAACGAAAACCTCGACGATAACGGCGAAATGCATGATATCAACGTGACGCCGTTTATCGACGTGATGTTGGTTCTGCTGATTATCTTTATGGTGGCGGCACCGTTAGCGACGGTAGATGTGAAGGTGAACTTGCCTGCTTCTACCAGCACGCCGCAGCCGCGCCCGGAAAAACCGGTTTATCTGTCGGTGAAGGCAGACAACTCGATGTTTATCGGTAACGATCCGGTCACCGATGAAACAATGATTACGGCGTTGAATGCGTTAACCGAAGGCAAGAAAGACACCACCATCTTCTTCCGAGCGGACAAAACCGTCGATTACGAGACGTTGATGAAGGTAATGGATACGCTGCATCAGGCGGGTTACCTGAAGATAGGTCTGGTCGGCGAAGAAACCGCCAAAGCGAAGTAA", - "dna_sequence_length": 426, - "functions": [ - "membrane spanning protein in TonB-ExbB-ExbD complex" - ], - "id": "CDS_2957", - "location": [ - [ - "NC_000913", - 3151243, - "-", - 426 - ] - ], - "md5": "2faa697807e663612135066223c04abe", - "parent_gene": "", - "protein_md5": "01253ca20e74209bc3ba1c7febf7acff", - "protein_translation": "MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVDVKVNLPASTSTPQPRPEKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEETAKAK", - "protein_translation_length": 141, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009869" - ], - [ - "gene_synonym", - "ECK2999" - ], - [ - "gene_synonym", - "b3006" - ], - [ - "gene_synonym", - "GI:16130904" - ], - [ - "gene_synonym", - "NP_417479.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABU7" - ], - [ - "gene_synonym", - "exbB" - ], - [ - "gene_synonym", - "EcoGene:EG10271" - ], - [ - "gene_synonym", - "JW2974" - ], - [ - "gene_synonym", - "GeneID:945420" - ] - ], - "dna_sequence": "GTGGGTAATAATTTAATGCAGACGGACCTTTCCGTCTGGGGTATGTATCAGCACGCCGATATTGTCGTTAAGTGCGTGATGATTGGGCTTATTTTGGCCTCCGTAGTCACCTGGGCAATCTTCTTCAGTAAGAGCGTAGAGTTCTTCAATCAGAAGCGTCGCCTTAAGCGCGAGCAGCAACTGCTGGCTGAAGCGCGTTCCTTAAACCAGGCCAACGATATCGCCGCTGATTTTGGTAGCAAAAGCTTAAGCCTGCATTTGCTCAATGAAGCGCAGAATGAGCTGGAACTGTCAGAAGGCAGCGACGATAACGAAGGTATTAAAGAACGTACCAGCTTCCGTCTGGAGCGTCGGGTCGCCGCAGTGGGTCGTCAAATGGGCCGCGGTAACGGCTATCTGGCAACCATCGGCGCGATTTCTCCGTTCGTTGGTCTGTTTGGTACGGTCTGGGGCATCATGAACAGCTTTATTGGTATCGCGCAAACGCAGACCACTAACCTGGCAGTCGTTGCGCCGGGTATCGCAGAAGCTCTGTTAGCAACGGCAATCGGCCTCGTGGCAGCGATTCCTGCGGTCGTTATCTATAACGTATTTGCACGCCAGATTGGCGGCTTTAAAGCGATGCTGGGTGATGTTGCAGCGCAGGTATTGTTGCTGCAAAGCCGTGACCTGGATCTGGAAGCCAGCGCCGCTGCGCATCCGGTTCGTGTCGCACAAAAATTACGCGCAGGATAA", - "dna_sequence_length": 735, - "functions": [ - "membrane spanning protein in TonB-ExbB-ExbD complex" - ], - "id": "CDS_2958", - "location": [ - [ - "NC_000913", - 3151984, - "-", - 735 - ] - ], - "md5": "bfe6dd210a428b6246115546c28f75ae", - "parent_gene": "", - "protein_md5": "8e9df694c4e104f46a6afb719b1b8b13", - "protein_translation": "MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEASAAAHPVRVAQKLRAG", - "protein_translation_length": 244, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2975" - ], - [ - "gene_synonym", - "GI:16130906" - ], - [ - "gene_synonym", - "GeneID:946240" - ], - [ - "gene_synonym", - "b3008" - ], - [ - "gene_synonym", - "NP_417481.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009878" - ], - [ - "gene_synonym", - "metC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06721" - ], - [ - "gene_synonym", - "ECK3000" - ], - [ - "gene_synonym", - "EcoGene:EG10583" - ] - ], - "dna_sequence": "ATGGCGGACAAAAAGCTTGATACTCAACTGGTGAATGCAGGACGCAGCAAAAAATACACTCTCGGCGCGGTAAATAGCGTGATTCAGCGCGCTTCTTCGCTGGTCTTTGACAGTGTAGAAGCCAAAAAACACGCGACACGTAATCGCGCCAATGGAGAGTTGTTCTATGGACGGCGCGGAACGTTAACCCATTTCTCCTTACAACAAGCGATGTGTGAACTGGAAGGTGGCGCAGGCTGCGTGCTATTTCCCTGCGGGGCGGCAGCGGTTGCTAATTCCATTCTTGCTTTTATCGAACAGGGCGATCATGTGTTGATGACCAACACCGCCTATGAACCGAGTCAGGATTTCTGTAGCAAAATCCTCAGCAAACTGGGCGTAACGACATCATGGTTTGATCCGCTGATTGGTGCCGATATCGTTAAGCATCTGCAGCCAAACACTAAAATCGTGTTTCTGGAATCGCCAGGCTCCATCACCATGGAAGTCCACGACGTTCCGGCGATTGTTGCCGCCGTACGCAGTGTGGTGCCGGATGCCATCATTATGATCGACAACACCTGGGCAGCCGGTGTGCTGTTTAAGGCGCTGGATTTTGGCATCGATGTTTCTATTCAAGCCGCCACCAAATATCTGGTTGGGCATTCAGATGCGATGATTGGCACTGCCGTGTGCAATGCCCGTTGCTGGGAGCAGCTACGGGAAAATGCCTATCTGATGGGCCAGATGGTCGATGCCGATACCGCCTATATAACCAGCCGTGGCCTGCGCACATTAGGTGTGCGTTTGCGTCAACATCATGAAAGCAGTCTGAAAGTGGCTGAATGGCTGGCAGAACATCCGCAAGTTGCGCGAGTTAACCACCCTGCTCTGCCTGGCAGTAAAGGTCACGAATTCTGGAAACGAGACTTTACAGGCAGCAGCGGGCTATTTTCCTTTGTGCTTAAGAAAAAACTCAATAATGAAGAGCTGGCGAACTATCTGGATAACTTCAGTTTATTCAGCATGGCCTACTCGTGGGGCGGGTATGAATCGTTGATCCTGGCAAATCAACCAGAACATATCGCCGCCATTCGCCCACAAGGCGAGATCGATTTTAGCGGGACCTTGATTCGCCTGCATATTGGTCTGGAAGATGTCGACGATCTGATTGCCGATCTGGACGCCGGTTTTGCGCGAATTGTATAA", 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"gene_synonym", - "b3009" - ], - [ - "gene_synonym", - "yghB" - ], - [ - "gene_synonym", - "EcoGene:EG11824" - ], - [ - "gene_synonym", - "GeneID:947490" - ], - [ - "gene_synonym", - "NP_417482.1" - ], - [ - "gene_synonym", - "ECK3001" - ] - ], - "dna_sequence": "ATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCGGATCCTCATATTGTTAGCGTTGTTTACTTTGTCATGTTTGCCACGCTGTTTTTAGAAAACGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGAAGATCAGGTAATGACGTTCCTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAATACTGTAACGCCTGA", - "dna_sequence_length": 660, - "functions": [ - "general envelope maintenance protein", - "DedA family inner membrane protein", - "putative multidrug efflux transporter" - ], - "id": "CDS_2960", - "location": [ - [ - "NC_000913", - 3153563, - "+", - 660 - ] - ], - "md5": "67608b3f6286d28d065ffe372264d69f", - "parent_gene": "", - "protein_md5": "41cd95fed8352133b976830ca3ed6a6f", - "protein_translation": "MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLPASFLPGDSLLILAGALIAQGVMDFLPTIAILTAAASLGCWLSYIQGRWLGNTKTVKGWLAQLPAKYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLSGLLWVSVVTSFGYALSMIPFVKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKKYCNA", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3010" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46855" - ], - [ - "gene_synonym", - "ASAP:ABE-0009884" - ], - [ - "gene_synonym", - "GeneID:947491" - ], - [ - "gene_synonym", - "GI:90111526" - ], - [ - "gene_synonym", - "yqhC" - ], - [ - "gene_synonym", - "EcoGene:EG13013" - ], - [ - "gene_synonym", - "JW5849" - ], - [ - "gene_synonym", - "NP_417483.2" - ], - [ - "gene_synonym", - "ECK3002" - ] - ], - "dna_sequence": "ATGCTACAAAATTGCGCACAATCAAATTGCCGCATTATTCCTAAGAAATTACGCGATATGAAACGTGAAGAGATTTGCCGCTTGCTGGCGGATAAAGTTAATAAACTGAAAAATAAAGAAAATAGTTTGTCAGGACTGTTGCCCGATGTGCGTTTGTTGTATGGCGAGACGCCTTTCGCACGTACACCGGTGATGTACGAGCCTGGCATCATAATTCTCTTTTCCGGGCATAAAATCGGTTATATCAATGAACGCGTGTTTCGTTATGATGCCAATGAATACCTGCTGCTGACGGTGCCGTTGCCGTTTGAGTGCGAAACCTATGCCACGTCAGAGGTGCCGCTGGCAGGGTTGCGTCTCAATGTCGATATTTTGCAGTTACAGGAACTGTTGATGGACATTGGCGAAGATGAGCATTTCCAGCCGTCGATGGCAGCCAGCGGGATTAACTCCGCCACGTTATCAGAAGAGATTTTATGCGCGGCGGAGCGGTTACTCGACGTGATGGAGCGACCACTGGATGCGCGTATTCTCGGCAAACAGATCATCCGCGAAATTCTGTACTACGTGCTGACCGGACCTTGCGGCGGCGCGTTACTGGCGCTGGTCAGTCGCCAGACTCACTTCAGTCTGATTAGCCGCGTGCTGAAACGGATTGAGAATAAATACACCGAAAACCTGAGCGTCGAGCAACTGGCGGCAGAAGCCAACATGAGCGTATCGGCGTTCCACCATAATTTTAAGTCTGTCACCAGTACCTCGCCGTTGCAGTATTTGAAGAATTACCGTCTGCATAAGGCGCGGATGATGATCATCCATGACGGCATGAAGGCCAGCGCAGCAGCGATGCGCGTCGGCTATGAAAGCGCATCGCAATTTAGCCGTGAGTTTAAACGTTACTTCGGTGTGACGCCGGGGGAAGATGCGGCAAGAATGCGGGCGATGCAGGGGAATTAA", - "dna_sequence_length": 957, - "functions": [ - "transcriptional activator of yqhD" - ], - "id": "CDS_2961", - "location": [ - [ - "NC_000913", - 3155218, - "-", - 957 - ] - ], - "md5": "d382f759cfa32e94fee7d44f4d1468a6", - "parent_gene": "", - "protein_md5": "fcd53c1460f4e972a7d8d89e497e80d3", - "protein_translation": "MLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSLSGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSREFKRYFGVTPGEDAARMRAMQGN", - "protein_translation_length": 318, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3011" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46856" - ], - [ - "gene_synonym", - "GI:16130909" - ], - [ - "gene_synonym", - "JW2978" - ], - [ - "gene_synonym", - "NP_417484.1" - ], - [ - "gene_synonym", - "yqhD" - ], - [ - "gene_synonym", - "EcoGene:EG13014" - ], - [ - "gene_synonym", - "ASAP:ABE-0009888" - ], - [ - "gene_synonym", - "ECK3003" - ], - [ - "gene_synonym", - "GeneID:947493" - ] - ], - "dna_sequence": "ATGAACAACTTTAATCTGCACACCCCAACCCGCATTCTGTTTGGTAAAGGCGCAATCGCTGGTTTACGCGAACAAATTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTGAAAAAAACCGGCGTTCTCGATCAAGTTCTGGATGCCCTGAAAGGCATGGACGTGCTGGAATTTGGCGGTATTGAGCCAAACCCGGCTTATGAAACGCTGATGAACGCCGTGAAACTGGTTCGCGAACAGAAAGTGACTTTCCTGCTGGCGGTTGGCGGCGGTTCTGTACTGGACGGCACCAAATTTATCGCCGCAGCGGCTAACTATCCGGAAAATATCGATCCGTGGCACATTCTGCAAACGGGCGGTAAAGAGATTAAAAGCGCCATCCCGATGGGCTGTGTGCTGACGCTGCCAGCAACCGGTTCAGAATCCAACGCAGGCGCGGTGATCTCCCGTAAAACCACAGGCGACAAGCAGGCGTTCCATTCTGCCCATGTTCAGCCGGTATTTGCCGTGCTCGATCCGGTTTATACCTACACCCTGCCGCCGCGTCAGGTGGCTAACGGCGTAGTGGACGCCTTTGTACACACCGTGGAACAGTATGTTACCAAACCGGTTGATGCCAAAATTCAGGACCGTTTCGCAGAAGGCATTTTGCTGACGCTAATCGAAGATGGTCCGAAAGCCCTGAAAGAGCCAGAAAACTACGATGTGCGCGCCAACGTCATGTGGGCGGCGACTCAGGCGCTGAACGGTTTGATTGGCGCTGGCGTACCGCAGGACTGGGCAACGCATATGCTGGGCCACGAACTGACTGCGATGCACGGTCTGGATCACGCGCAAACACTGGCTATCGTCCTGCCTGCACTGTGGAATGAAAAACGCGATACCAAGCGCGCTAAGCTGCTGCAATATGCTGAACGCGTCTGGAACATCACTGAAGGTTCCGATGATGAGCGTATTGACGCCGCGATTGCCGCAACCCGCAATTTCTTTGAGCAATTAGGCGTGCCGACCCACCTCTCCGACTACGGTCTGGACGGCAGCTCCATCCCGGCTTTGCTGAAAAAACTGGAAGAGCACGGCATGACCCAACTGGGCGAAAATCATGACATTACGTTGGATGTCAGCCGCCGTATATACGAAGCCGCCCGCTAA", 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"gene_synonym", - "GI:90111527" - ], - [ - "gene_synonym", - "GeneID:947495" - ], - [ - "gene_synonym", - "yqhE" - ], - [ - "gene_synonym", - "JW5499" - ], - [ - "gene_synonym", - "dkgA" - ], - [ - "gene_synonym", - "ECK3004" - ], - [ - "gene_synonym", - "EcoGene:EG13015" - ] - ], - "dna_sequence": "ATGGCTAATCCAACCGTTATTAAGCTACAGGATGGCAATGTCATGCCCCAGCTGGGACTGGGCGTCTGGCAAGCAAGTAATGAGGAAGTAATCACCGCCATTCAAAAAGCGTTAGAAGTGGGTTATCGCTCGATTGATACCGCCGCGGCCTACAAGAACGAAGAAGGTGTCGGCAAAGCCCTGAAAAATGCCTCAGTCAACAGAGAAGAACTGTTCATCACCACTAAGCTGTGGAACGACGACCACAAGCGCCCCCGCGAAGCCCTGCTCGACAGCCTGAAAAAACTCCAGCTTGATTATATCGACCTCTACTTAATGCACTGGCCCGTTCCCGCTATCGACCATTATGTCGAAGCATGGAAAGGCATGATCGAATTGCAAAAAGAGGGATTAATCAAAAGCATCGGCGTGTGCAACTTCCAGATCCATCACCTGCAACGCCTGATTGATGAAACTGGCGTGACGCCTGTGATAAACCAGATCGAACTTCATCCGCTGATGCAACAACGCCAGCTACACGCCTGGAACGCGACACACAAAATCCAGACCGAATCCTGGAGCCCATTAGCGCAAGGAGGGAAAGGCGTTTTCGATCAGAAAGTCATTCGCGATCTGGCAGATAAATACGGCAAAACCCCGGCGCAGATTGTTATCCGCTGGCATCTGGATAGCGGCCTGGTGGTGATCCCGAAATCGGTCACACCTTCACGTATTGCCGAAAACTTTGATGTCTGGGATTTCCGTCTCGACAAAGACGAACTCGGCGAAATTGCAAAACTCGATCAGGGCAAGCGTCTCGGTCCCGATCCTGACCAGTTCGGCGGCTAA", - "dna_sequence_length": 828, - "functions": [ - "2,5-diketo-D-gluconate reductase A" - ], - "id": "CDS_2963", - "location": [ - [ - "NC_000913", - 3156623, - "+", - 828 - ] - ], - "md5": "0baba97d10f391649d1c88eef337cf00", - "parent_gene": "", - "protein_md5": "88e41fc450178b85b56d7a3a9feda349", - "protein_translation": "MANPTVIKLQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRSIDTAAAYKNEEGVGKALKNASVNREELFITTKLWNDDHKRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKGVFDQKVIRDLADKYGKTPAQIVIRWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRLGPDPDQFGG", - "protein_translation_length": 275, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0009895" - ], - [ - "gene_synonym", - "b3013" - ], - [ - "gene_synonym", - "JW5500" - ], - [ - "gene_synonym", - "GI:49176301" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46858" - ], - [ - "gene_synonym", - "yqhF" - ], - [ - "gene_synonym", - "yqhG" - ], - [ - "gene_synonym", - "EcoGene:EG13017" - ], - [ - "gene_synonym", - "ECK3005" - ], - [ - "gene_synonym", - "GeneID:945919" - ], - [ - "gene_synonym", - "YP_026195.1" - ] - ], - "dna_sequence": "ATGAAAATAATACTTCTGTTTTTAGCAGCCCTGGCAAGTTTTACCGTACACGCACAGCCCCCCTCACAGACCGTAGAACAAACAGTCCGGCATATTTATCAGAACTATAAATCAGATGCCACTGCCCCTTATTTTGGTGAAACCGGAGAGCGGGCGATAACTTCTGCGCGTATTCAACAGGCGCTTACCCTGAACGACAATCTTACGCTGCCGGGCAATATTGGCTGGCTGGATTATGATCCGGTTTGTGATTGTCAGGATTTTGGCGATCTGGTGCTAGAAAGCGTTGCGATAACCCAAACTGACGCCGATCATGCCGATGCCGTTGTGCGCTTTCGTATCTTTAAAGATGATAAAGAAAAGACCACGCAGACACTGAAAATGGTGGCGGAAAATGGTCGTTGGGTCATTGACGATATTGTCAGCAATCATGGCAGCGTCTTACAAGCAGTTAATAGCGAGAATGAAAAAACGCTGGCCGCTTTAGCTTCGTTGCAAAAAGAACAGCCGGAAGCCTTTGTTGCCGAACTCTTTGAACATATTGCTGATTATAGCTGGCCGTGGACGTGGGTGGTTTCCGACTCTTACCGCCAGGCGGTTAATGCCTTCTATAAAACCACCTTCAAGACGGCCAATAATCCCGATGAAGATATGCAAATAGAACGGCAATTTATTTACGACAATCCGATCTGTTTTGGCGAAGAGTCGCTATTTTCACGCGTTGATGAAATTCGAGTCCTGGAGAAAACCGCCGATTCCGCCCGCATTCATGTTCGTTTTACGCTGACCAATGGCAACAACGAAGAGCAAGAACTGGTTTTACAGCGGCGCGAAGGCAAGTGGGAAATCGCTGATTTTATCCGCCCGAACAGCGGCAGCCTACTTAAGCAGATTGAGGCAAAAACTGCCGCCAGATTAAAGCAATGA", - "dna_sequence_length": 927, - "functions": [ - "DUF3828 family putative periplasmic protein" - ], - "id": "CDS_2964", - "location": [ - [ - "NC_000913", - 3157650, - "+", - 927 - ] - ], - "md5": "bfbedb6e8549f495010f9994dba893f4", - "parent_gene": "", - "protein_md5": "a7b3522afc4276875720fab056a8b64b", - "protein_translation": "MKIILLFLAALASFTVHAQPPSQTVEQTVRHIYQNYKSDATAPYFGETGERAITSARIQQALTLNDNLTLPGNIGWLDYDPVCDCQDFGDLVLESVAITQTDADHADAVVRFRIFKDDKEKTTQTLKMVAENGRWVIDDIVSNHGSVLQAVNSENEKTLAALASLQKEQPEAFVAELFEHIADYSWPWTWVVSDSYRQAVNAFYKTTFKTANNPDEDMQIERQFIYDNPICFGEESLFSRVDEIRVLEKTADSARIHVRFTLTNGNNEEQELVLQRREGKWEIADFIRPNSGSLLKQIEAKTAARLKQ", - "protein_translation_length": 308, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3014" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P65298" - ], - [ - "gene_synonym", - "ASAP:ABE-0009898" - ], - [ - "gene_synonym", - "EcoGene:EG13018" - ], - [ - "gene_synonym", - "JW2982" - ], - [ - "gene_synonym", - "NP_417487.1" - ], - [ - "gene_synonym", - "GI:16130912" - ], - [ - "gene_synonym", - "ECK3006" - ], - [ - "gene_synonym", - "yqhH" - ], - [ - "gene_synonym", - "GeneID:946832" - ] - ], - "dna_sequence": "ATGAAAACGATTTTCACCGTGGGAGCTGTTGTTCTGGCAACCTGCTTGCTCAGTGGCTGCGTCAATGAGCAAAAGGTCAATCAGCTGGCGAGCAATGTGCAAACATTAAATGCCAAAATCGCCCGGCTTGAGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGA", - "dna_sequence_length": 258, - "functions": [ - "outer membrane lipoprotein, Lpp paralog" - ], - "id": "CDS_2965", - "location": [ - [ - "NC_000913", - 3158627, - "+", - 258 - ] - ], - "md5": "429a63b3b6a3bad3b0645062384ba0b7", - "parent_gene": "", - "protein_md5": "6785684b497f6352952536f341ce094f", - "protein_translation": "MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCLRMYAE", - "protein_translation_length": 85, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_026196.1" - ], - [ - "gene_synonym", - "GI:49176302" - ], - [ - "gene_synonym", - "b4469" - ], - [ - "gene_synonym", - "JW5501" - ], - [ - "gene_synonym", - "ygiR" - ], - [ - "gene_synonym", - "ygiQ" - ], - [ - "gene_synonym", - "EcoGene:EG13019" - ], - [ - "gene_synonym", - "ECK3007" - ], - [ - "gene_synonym", - "GeneID:948963" - ], - [ - "gene_synonym", - "ASAP:ABE-0174099" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46861" - ] - ], - "dna_sequence": "ATGAGCTCTATCTCCCTGATCCAACCGGATCGCGACCTGTTCTCCTGGCCGCAGTACTGGGCCGCCTGTTTTGGACCGGCACCGTTTTTGCCGATGTCTCGTGAAGAGATGGATCAACTTGGCTGGGATAGCTGCGACATCATTTTGGTTACTGGCGACGCGTATGTCGATCACCCAAGCTTCGGGATGGCGATTTGCGGTCGTATGCTGGAAGCGCAGGGCTTTCGCGTCGGGATCATCGCCCAGCCGGACTGGAGCAGCAAAGACGACTTTATGCGTCTGGGTAAACCGAATCTGTTTTTCGGTGTTACTGCTGGCAACATGGATTCGATGATCAACCGTTATACCGCCGATCGCCGTTTACGTCATGACGATGCCTACACGCCGGATAACGTCGCGGGTAAGCGCCCGGATCGCGCCACACTGGTTTATACCCAGCGTTGTAAAGAGGCGTGGAAAGATGTACCGGTGATCCTCGGCGGTATTGAGGCTAGTCTGCGCCGTACCGCGCATTATGATTACTGGTCCGATACCGTGCGCCGTTCCGTGCTGGTGGATTCGAAAGCCGACATGCTGATGTTTGGTAACGGTGAGCGTCCGCTGGTGGAAGTGGCGCATCGTCTGGCGATGGGCGAGCCAATTAGTGAAATCCGCGATGTGCGTAATACCGCGATTATCGTGAAAGAGGCGCTGCCTGGCTGGAGCGGCGTGGATTCCACCCGTCTTGATACCCCTGGAAAAATCGACCCAATCCCGCATCCGTATGGTGAAGATTTGCCGTGCGCGGATAACAAACCGGTGGCACCGAAAAAGCAGGAAGCCAAAGCCGTAACCGTGCAGCCACCGCGCCCGAAACCGTGGGAAAAAACCTACGTGTTGCTGCCTTCTTTCGAGAAAGTGAAGGGCGATAAAGTGCTGTACGCCCATGCTTCGCGTATTCTGCACCACGAAACCAACCCAGGCTGTGCCCGCGCATTGATGCAAAAACACGGCGACCGCTATGTGTGGATCAACCCGCCTGCTATTCCGCTTTCTACCGAAGAGATGGACAGCGTTTTTGCGCTGCCATACAAGCGCGTGCCACATCCGGCCTATGGCAATGCCCGTATTCCGGCTTACGAAATGATCCGTTTTTCGGTCAACATTATGCGTGGCTGCTTTGGCGGCTGCTCTTTCTGTTCTATCACCGAGCACGAAGGGCGCATTATTCAGAGCCGTTCCGAAGATTCGATCATTAATGAGATCGAAGCGATCCGCGACACCGTTCCAGGTTTTACGGGCGTGATTTCCGATCTTGGTGGGCCAACTGCCAACATGTATATGTTGCGCTGCAAATCGCCACGCGCTGAACAAACTTGTCGCCGTTTGTCGTGCGTTTATCCGGATATTTGTCCGCACATGGACACGAACCACGAACCAACGATCAACCTCTATCGCCGTGCGCGTGATCTGAAAGGCATTAAAAAGATCCTGATTGCCTCTGGTGTGCGTTATGACATAGCCGTAGAAGATCCGCGCTATATCAAAGAACTGGCGACCCATCACGTCGGCGGTTATCTGAAGATTGCCCCGGAACATACCGAAGAAGGGCCGTTATCGAAGATGATGAAGCCGGGCATGGGCAGCTATGACCGCTTTAAAGAGCTGTTCGATACTTACTCAAAACAGGCAGGTAAAGAGCAGTATCTGATCCCCTATTTCATCTCCGCGCACCCCGGTACGCGTGATGAAGATATGGTGAATCTGGCGCTGTGGCTGAAAAAGCACCGCTTCCGCCTCGACCAGGTGCAGAACTTCTATCCGTCGCCGCTGGCGAACTCAACCACCATGTATTACACCGGGAAAAACCCGCTGGCGAAGATTGGTTATAAGAGCGAAGACGTCTTCGTACCGAAGGGCGACAAACAGCGTCGTTTGCATAAAGCGTTGTTGCGTTACCACGATCCGGCAAACTGGCCGTTAATCCGCCAGGCGCTGGAAGCGATGGGCAAAAAGCATCTGATTGGCAGCCGTCGCGATTGCTTAGTGCCTGCGCCAACCATTGAAGAGATGCGTGAAGCTCGTCGCCAGAACCGCAATACCCGTCCGGCGTTGACGAAACATACGCCGATGGCGACCCAGCGTCAGACGCCTGCTACGGCAAAAAAAGCGTCGTCTACGCAATCTCGTCCGGTGAATGCTGGTGCGAAGAAACGGCCTAAAGCGGCGGTTGGACGTTAA", - "dna_sequence_length": 2220, - "functions": [ - "Radical SAM superfamily protein" - ], - "id": "CDS_2966", - "location": [ - [ - "NC_000913", - 3161146, - "-", - 2220 - ] - ], - "md5": "d773656dc7ff4afa309614c0f09f466a", - "parent_gene": "", - "protein_md5": "d3bef5dc5d72fe9c310c111d7432b379", - "protein_translation": "MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSREEMDQLGWDSCDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFGVTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILGGIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIRDVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKAVTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRYVWINPPAIPLSTEEMDSVFALPYKRVPHPAYGNARIPAYEMIRFSVNIMRGCFGGCSFCSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAEQTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYIKELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPYFISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKNPLAKIGYKSEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIEEMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR", - "protein_translation_length": 739, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygiJ" - ], - [ - "gene_synonym", - "ASAP:ABE-0009905" - ], - [ - "gene_synonym", - "b3017" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P26648" - ], - [ - "gene_synonym", - "JW2985" - ], - [ - "gene_synonym", - "sufI" - ], - [ - "gene_synonym", - "sui" - ], - [ - "gene_synonym", - "EcoGene:EG11376" - ], - [ - "gene_synonym", - "GeneID:944982" - ], - [ - "gene_synonym", - "NP_417489.1" - ], - [ - "gene_synonym", - "ECK3008" - ], - [ - "gene_synonym", - "ftsP" - ], - [ - "gene_synonym", - "GI:16130913" - ] - ], - "dna_sequence": "ATGTCACTCAGTCGGCGTCAGTTCATTCAGGCATCGGGGATTGCACTTTGTGCAGGCGCTGTTCCCCTGAAGGCCAGCGCAGCCGGGCAACAGCAACCGCTACCCGTTCCGCCGCTACTTGAATCTCGCCGTGGGCAACCGCTGTTTATGACTGTACAACGTGCGCACTGGTCATTTACGCCAGGGACACGCGCGTCGGTCTGGGGAATCAATGGTCGTTACCTGGGGCCGACTATCCGCGTCTGGAAGGGCGACGATGTTAAGCTTATTTACAGCAACCGCCTGACAGAAAATGTCTCAATGACGGTGGCCGGGCTACAGGTACCAGGCCCGCTGATGGGCGGTCCGGCACGGATGATGTCGCCAAACGCTGACTGGGCACCCGTACTGCCCATTCGCCAGAACGCAGCTACTCTGTGGTATCACGCCAATACTCCCAACCGCACGGCTCAGCAGGTCTATAACGGCCTTGCCGGAATGTGGCTGGTGGAAGATGAAGTCAGCAAGTCGCTGCCTATCCCCAACCATTATGGTGTGGATGATTTTCCGGTCATTATCCAGGATAAACGGCTGGATAACTTTGGTACGCCAGAATACAACGAACCGGGAAGCGGCGGCTTTGTTGGTGATACGCTGCTGGTTAACGGTGTACAAAGCCCGTACGTTGAAGTCTCGCGTGGCTGGGTGCGCTTGCGACTGCTGAACGCGTCGAACTCTCGTCGCTATCAACTACAGATGAACGATGGTCGCCCGTTACATGTGATTTCTGGCGATCAGGGATTCCTGCCTGCTCCTGTATCGGTGAAGCAACTTTCGCTGGCACCGGGCGAGCGCCGCGAGATTCTGGTGGATATGAGCAACGGCGATGAAGTGTCGATCACCTGTGGCGAAGCGGCGAGCATTGTTGATCGTATTCGTGGCTTCTTTGAGCCATCCAGTATTCTGGTTTCTACCCTGGTGCTAACGCTGCGCCCAACCGGCCTTCTGCCGCTGGTCACAGACAGTCTTCCGATGCGCTTGCTGCCAACTGAAATCATGGCTGGTTCGCCAATTCGCAGTCGCGATATCAGTCTGGGTGATGACCCGGGTATTAATGGACAGCTGTGGGACGTCAACCGTATTGATGTCACCGCGCAGCAAGGAACGTGGGAACGCTGGACGGTACGCGCGGACGAGCCGCAAGCGTTCCATATTGAAGGCGTAATGTTCCAGATCCGTAACGTGAATGGCGCGATGCCGTTCCCGGAAGACAGAGGCTGGAAAGATACCGTTTGGGTTGACGGACAAGTGGAGCTGCTTGTTTATTTCGGTCAGCCTTCCTGGGCGCACTTCCCGTTCTACTTCAACAGTCAGACGCTGGAAATGGCGGACCGTGGCTCGATTGGGCAACTGTTGGTCAATCCGGTACCGTAA", - "dna_sequence_length": 1413, - "functions": [ - "septal ring component that protects the divisome from stress", - "multicopy suppressor of ftsI(Ts)" - ], - "id": "CDS_2967", - "location": [ - [ - "NC_000913", - 3162669, - "-", - 1413 - ] - ], - "md5": "9303087a1e571b8b053119eb930530a2", - "parent_gene": "", - "protein_md5": "b1cbeba5d0a5c242fd072b71b7f6541a", - "protein_translation": "MSLSRRQFIQASGIALCAGAVPLKASAAGQQQPLPVPPLLESRRGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGPLMGGPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQSPYVEVSRGWVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPVSVKQLSLAPGERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLPMRLLPTEIMAGSPIRSRDISLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRADEPQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWVDGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP", - "protein_translation_length": 470, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "parF" - ], - [ - "gene_synonym", - "EcoGene:EG11377" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P26647" - ], - [ - "gene_synonym", - "b3018" - ], - [ - "gene_synonym", - "JW2986" - ], - [ - "gene_synonym", - "NP_417490.1" - ], - [ - "gene_synonym", - "GeneID:947496" - ], - [ - "gene_synonym", - "plsC" - ], - [ - "gene_synonym", - "ECK3009" - ], - [ - "gene_synonym", - "ASAP:ABE-0009910" - ], - [ - "gene_synonym", - "GI:16130914" - ] - ], - "dna_sequence": "ATGCTATATATCTTTCGTCTTATTATTACCGTGATTTACAGCATCTTAGTCTGTGTATTCGGCTCCATTTACTGCCTTTTCAGCCCGCGTAACCCGAAACATGTGGCCACCTTTGGGCATATGTTTGGCCGTCTTGCGCCGCTGTTTGGCCTGAAAGTTGAGTGCCGTAAACCTACAGACGCTGAAAGCTACGGCAATGCTATCTATATCGCTAACCACCAGAACAACTATGACATGGTGACAGCATCGAACATCGTGCAACCGCCGACGGTGACGGTAGGTAAAAAGAGCTTGCTGTGGATCCCCTTCTTCGGGCAGTTGTACTGGTTAACCGGCAACTTATTGATCGACAGAAACAATCGCACTAAAGCTCACGGCACCATTGCGGAAGTAGTGAATCACTTCAAAAAACGCCGTATTTCCATCTGGATGTTCCCGGAAGGAACCCGCAGCCGTGGTCGCGGCCTGCTACCGTTCAAGACTGGAGCATTTCACGCGGCAATTGCGGCGGGCGTCCCGATTATTCCCGTGTGCGTCTCTACAACTTCGAATAAGATTAATCTTAATCGACTGCACAACGGTCTGGTGATTGTCGAAATGCTGCCGCCAATTGACGTCAGTCAGTATGGCAAAGATCAGGTTCGTGAGCTGGCTGCCCATTGTCGTTCGATAATGGAACAAAAAATCGCCGAGCTCGATAAAGAAGTCGCAGAACGCGAAGCCGCCGGAAAAGTTTAA", - "dna_sequence_length": 738, - "functions": [ - "1-acyl-sn-glycerol-3-phosphate acyltransferase" - ], - "id": "CDS_2968", - "location": [ - [ - "NC_000913", - 3163481, - "-", - 738 - ] - ], - "md5": "0b5df7fe8d13a11258ae57d3076db966", - "parent_gene": "", - "protein_md5": "aa7c0905c8694c90f6e72488c504e003", - "protein_translation": "MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGRLAPLFGLKVECRKPTDAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAEREAAGKV", - "protein_translation_length": 245, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10686" - ], - [ - "gene_synonym", - "parC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFI2" - ], - [ - "gene_synonym", - "b3019" - ], - [ - "gene_synonym", - "JW2987" - ], - [ - "gene_synonym", - "GeneID:947499" - ], - [ - "gene_synonym", - "ASAP:ABE-0009916" - ], - [ - "gene_synonym", - "ECK3010" - ], - [ - "gene_synonym", - "NP_417491.1" - ], - [ - "gene_synonym", - "GI:16130915" - ] - ], - "dna_sequence": "ATGAGCGATATGGCAGAGCGCCTTGCGCTACATGAATTTACGGAAAACGCCTACTTAAACTACTCCATGTACGTGATCATGGACCGTGCGTTGCCGTTTATTGGTGATGGTCTGAAACCTGTTCAGCGCCGCATTGTGTATGCGATGTCTGAACTGGGCCTGAATGCCAGCGCCAAATTTAAAAAATCGGCCCGTACCGTCGGTGACGTACTGGGTAAATACCATCCGCACGGCGATAGCGCCTGTTATGAAGCGATGGTCCTGATGGCGCAACCGTTCTCTTACCGTTATCCGCTGGTTGATGGTCAGGGGAACTGGGGCGCGCCGGACGATCCGAAATCGTTCGCGGCAATGCGTTACACCGAATCCCGGTTGTCGAAATATTCCGAGCTGCTATTGAGCGAGCTGGGGCAGGGGACGGCTGACTGGGTGCCAAACTTCGACGGCACTTTGCAGGAGCCGAAAATGCTACCTGCCCGTCTGCCAAACATTTTGCTTAACGGCACCACCGGTATTGCCGTCGGCATGGCGACCGATATTCCACCGCATAACCTGCGTGAAGTGGCTCAGGCGGCAATCGCATTAATCGACCAGCCGAAAACCACGCTCGATCAGCTGCTGGATATCGTGCAGGGGCCGGATTATCCGACTGAAGCGGAAATTATCACTTCGCGCGCCGAGATCCGTAAAATCTACGAGAACGGACGTGGTTCAGTGCGTATGCGCGCGGTGTGGAAGAAAGAAGATGGCGCGGTGGTTATCAGCGCATTGCCGCATCAGGTTTCAGGTGCGCGCGTACTGGAGCAAATTGCTGCGCAAATGCGCAACAAAAAGCTGCCGATGGTTGACGATCTGCGCGATGAATCTGACCACGAGAACCCGACCCGCCTGGTGATTGTGCCGCGTTCCAACCGCGTGGATATGGATCAGGTGATGAACCACCTCTTCGCTACCACCGATCTGGAAAAGAGCTATCGTATTAACCTTAATATGATCGGTCTGGATGGTCGTCCGGCGGTGAAAAACCTGCTGGAAATCCTCTCCGAATGGCTGGTGTTCCGCCGCGATACCGTGCGCCGCCGACTGAACTATCGTCTGGAGAAAGTCCTCAAGCGCCTGCATATCCTCGAAGGTTTGCTGGTGGCGTTTCTCAATATCGACGAAGTGATTGAGATCATTCGTAATGAAGATGAACCGAAACCGGCGCTGATGTCGCGGTTTGGCCTTACGGAAACCCAGGCGGAAGCGATCCTCGAACTGAAACTGCGTCATCTTGCCAAACTGGAAGAGATGAAGATTCGCGGTGAGCAGAGTGAACTGGAAAAAGAGCGCGACCAGTTGCAGGGCATTTTGGCTTCCGAGCGTAAAATGAATAACCTGCTGAAGAAAGAACTGCAGGCAGACGCGCAAGCCTACGGTGACGATCGTCGTTCGCCGTTGCAGGAACGCGAAGAAGCGAAAGCGATGAGCGAGCACGACATGCTGCCGTCTGAACCTGTCACCATTGTGCTGTCGCAGATGGGCTGGGTACGCAGCGCTAAAGGCCATGATATCGACGCGCCGGGCCTGAATTATAAAGCGGGTGATAGCTTCAAAGCGGCGGTGAAAGGTAAGAGCAACCAACCGGTAGTGTTTGTTGATTCCACCGGTCGTAGCTATGCCATTGACCCGATTACGCTGCCGTCGGCGCGTGGTCAGGGCGAGCCGCTCACCGGCAAATTAACGTTGCCGCCTGGGGCGACCGTTGACCATATGCTGATGGAAAGCGACGATCAGAAACTGCTGATGGCTTCCGATGCGGGTTACGGTTTCGTCTGCACCTTTAACGATCTGGTGGCGCGTAACCGTGCAGGTAAGGCTTTGATCACCTTACCGGAAAATGCCCATGTTATGCCGCCGGTGGTGATTGAAGATGCTTCCGATATGCTGCTGGCAATCACTCAGGCAGGCCGTATGTTGATGTTCCCGGTAAGTGATCTGCCGCAGCTGTCGAAGGGCAAAGGCAACAAGATTATCAACATTCCATCGGCAGAAGCCGCGCGTGGAGAAGATGGTCTGGCGCAATTGTACGTTCTGCCGCCGCAAAGCACGCTGACCATTCATGTTGGGAAACGCAAAATTAAACTGCGCCCGGAAGAGTTACAGAAAGTCACTGGCGAACGTGGACGCCGCGGTACGTTGATGCGCGGTTTGCAGCGTATCGATCGTGTTGAGATCGACTCTCCTCGCCGTGCCAGCAGCGGTGATAGCGAAGAGTAA", - "dna_sequence_length": 2259, - "functions": [ - "DNA topoisomerase IV, subunit A" - ], - "id": "CDS_2969", - "location": [ - [ - "NC_000913", - 3165973, - "-", - 2259 - ] - ], - "md5": "27178e2d2d327c104f6cf14b37a29787", - "parent_gene": "", - "protein_md5": "a8ab4921f417360aa1025821a5f3de3c", - "protein_translation": "MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTEAEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEIIRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGILASERKMNNLLKKELQADAQAYGDDRRSPLQEREEAKAMSEHDMLPSEPVTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAARGEDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTGERGRRGTLMRGLQRIDRVEIDSPRRASSGDSEE", - "protein_translation_length": 752, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417492.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009920" - ], - [ - "gene_synonym", - "EcoGene:EG13021" - ], - [ - "gene_synonym", - "JW2988" - ], - [ - "gene_synonym", - "b3020" - ], - [ - "gene_synonym", - "GeneID:947140" - ], - [ - "gene_synonym", - "ygiS" - ], - [ - "gene_synonym", - "ECK3011" - ], - [ - "gene_synonym", - "GI:16130916" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46863" - ] - ], - "dna_sequence": "ATGTATACGCGAAATTTATTATGGCTGGTCAGCCTGGTAAGTGCGGCTCCTCTCTACGCTGCTGACGTTCCCGCCAACACACCGCTCGCCCCGCAACAAGTCTTTCGTTACAACAATCATAGCGACCCAGGTACGCTCGACCCGCAAAAGGTGGAGGAGAATACTGCCGCGCAGATTGTGCTGGATCTGTTTGAAGGTCTGGTATGGATGGACGGTGAAGGCCAGGTGCAGCCCGCTCAGGCTGAACGCTGGGAGATACTGGACGGCGGCAAGCGCTATATTTTCCATCTGCGTAGCGGTTTGCAGTGGTCCGACGGTCAGCCTCTGACGGCAGAGGATTTTGTCCTCGGCTGGCAGCGCGCGGTTGACCCGAAAACGGCAAGCCCTTTTGCTGGCTATCTGGCACAGGCGCACATTAACAATGCCGCAGCTATTGTTGCGGGTAAAGCAGATGTTACATCGCTGGGTGTCAAAGCGACGGATGATCGTACTCTTGAAGTTACGCTTGAGCAGCCGGTTCCTTGGTTCACGACGATGCTCGCCTGGCCGACGCTGTTCCCGGTTCCTCATCATGTCATCGCTAAACATGGCGATAGCTGGAGTAAGCCAGAGAACATGGTTTACAACGGTGCCTTTGTGCTTGATCAGTGGGTAGTTAACGAAAAGATTACTGCACGCAAAAATCCAAAGTACCGCGATGCGCAACATACAGTATTGCAACAGGTTGAGTATCTGGCGCTAGATAATTCGGTCACCGGCTATAACCGCTATCGCGCGGGAGAGGTCGATCTCACCTGGGTTCCGGCGCAGCAAATTCCCGCCATTGAAAAATCACTGCCTGGCGAGCTACGAATTATTCCGCGTCTGAACAGCGAATATTACAACTTCAACCTTGAGAAACCGCCATTTAACGATGTGCGAGTGCGTCGGGCGCTATATCTTACGGTTGATCGACAGCTTATTGCGCAAAAGGTACTGGGGTTGAGAACGCCCGCAACCACGCTGACGCCGCCAGAGGTAAAAGGCTTTAGCGCGACGACGTTCGATGAACTGCAAAAGCCAATGAGTGAGCGCGTCGCGATGGCAAAAGCCTTGCTGAAACAGGCGGGATACGACGCCTCTCATCCGCTACGCTTTGAGCTGTTCTACAACAAGTACGATCTGCATGAAAAGACCGCGATAGCGTTGTCTTCCGAATGGAAAAAATGGCTGGGTGCACAGGTGACGCTGCGCACAATGGAGTGGAAAACCTATCTTGATGCCCGACGAGCCGGTGATTTCATGCTGTCTCGGCAGTCGTGGGATGCGACGTACAATGATGCTTCCAGCTTCCTGAACACGCTCAAAAGCGATAGTGAAGAAAACGTCGGTCACTGGAAAAATGCGCAGTATGACGCCTTACTAAACCAGGCCACGCAGATCACTGATGCGACAAAGCGTAATGCGTTGTATCAGCAGGCAGAAGTGATCATCAACCAACAGGCACCGCTGATTCCTATCTACTATCAGCCGTTAATCAAACTGCTTAAACCCTACGTTGGCGGTTTTCCGCTGCATAATCCCCAGGATTATGTCTACAGCAAAGAGTTGTATATCAAGGCACATTGA", 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"gene_synonym", - "ASAP:ABE-0009923" - ], - [ - "gene_synonym", - "JW2989" - ], - [ - "gene_synonym", - "b3021" - ], - [ - "gene_synonym", - "NP_417493.1" - ], - [ - "gene_synonym", - "mqsA" - ], - [ - "gene_synonym", - "ygiT" - ], - [ - "gene_synonym", - "ECK3012" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46864" - ], - [ - "gene_synonym", - "GeneID:945814" - ], - [ - "gene_synonym", - "GI:16130917" - ] - ], - "dna_sequence": "ATGAAATGTCCGGTTTGCCACCAGGGAGAAATGGTTTCTGGCATTAAAGATATTCCATACACCTTCCGTGGACGAAAAACAGTATTGAAAGGTATCCACGGTTTATATTGTGTCCATTGCGAAGAGAGCATCATGAATAAAGAAGAGTCAGATGCTTTCATGGCGCAAGTAAAGGCATTTCGGGCTTCGGTGAATGCCGAAACAGTGGCACCTGAATTTATAGTGAAGGTTCGAAAAAAGCTCTCTCTTACCCAAAAAGAGGCAAGCGAAATTTTTGGGGGAGGTGTAAATGCGTTTTCGCGTTACGAAAAAGGCAATGCCCAACCTCATCCTTCCACAATCAAACTTTTACGTGTTCTGGATAAGCATCCAGAACTATTGAATGAAATCCGTTAA", - "dna_sequence_length": 396, - "functions": [ - "antitoxin for MqsR toxin", - "transcriptional repressor" - ], - "id": "CDS_2971", - "location": [ - [ - "NC_000913", - 3168246, - "-", - 396 - ] - ], - "md5": "9f2c5cd485550adbedc5e5fb58ded044", - "parent_gene": "", - "protein_md5": "1717100b8891bada43f38885bdb45c2b", - "protein_translation": "MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR", - "protein_translation_length": 131, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13023" - ], - [ - "gene_synonym", - "GeneID:947500" - ], - [ - "gene_synonym", - "mqsR" - ], - [ - "gene_synonym", - "b3022" - ], - [ - "gene_synonym", - "JW2990" - ], - [ - "gene_synonym", - "GI:16130918" - ], - [ - "gene_synonym", - "ygiU" - ], - [ - "gene_synonym", - "ECK3013" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46865" - ], - [ - "gene_synonym", - "NP_417494.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009925" - ] - ], - "dna_sequence": "ATGGAAAAACGCACACCACATACACGTTTGAGTCAGGTTAAAAAACTTGTCAATGCCGGGCAAGTTCGTACAACACGTAGTGCCCTGTTAAATGCAGATGAGTTAGGTTTGGATTTTGATGGTATGTGTAATGTTATCATTGGATTATCAGAGAGCGACTTTTATAAAAGCATGACCACCTACTCTGATCATACTATCTGGCAGGATGTTTACAGACCCAGGCTTGTTACAGGCCAGGTTTATCTTAAAATTACGGTAATTCATGACGTACTGATCGTCTCGTTTAAGGAGAAGTAA", - "dna_sequence_length": 297, - "functions": [ - "GCU-specific mRNA interferase toxin of the MqsR-MqsA toxin-antitoxin system", - "biofilm/motility regulator", - "anti-repressor" - ], - "id": "CDS_2972", - "location": [ - [ - "NC_000913", - 3168544, - "-", - 297 - ] - ], - "md5": "6235181deda5564891455d578c3a5141", - "parent_gene": "", - "protein_md5": "51c113056902e5b919dcadc144985608", - "protein_translation": "MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCNVIIGLSESDFYKSMTTYSDHTIWQDVYRPRLVTGQVYLKITVIHDVLIVSFKEK", - "protein_translation_length": 98, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13024" - ], - [ - "gene_synonym", - "ASAP:ABE-0009928" - ], - [ - "gene_synonym", - "GI:49176303" - ], - [ - "gene_synonym", - "b3023" - ], - [ - "gene_synonym", - "YP_026197.1" - ], - [ - "gene_synonym", - "JW5502" - ], - [ - "gene_synonym", - "ygiV" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46866" - ], - [ - "gene_synonym", - "GeneID:945805" - ], - [ - "gene_synonym", - "ECK3014" - ] - ], - "dna_sequence": "ATGACAAACCTGACACTGGATGTAAACATTATCGATTTCCCATCAATACCTGTGGCGATGTTGCCGCACCGCTGTAGCCCTGAATTGCTCAACTACAGCGTGGCGAAATTTATCATGTGGCGTAAAGAGACGGGGCTTTCTCCTGTTAACCAAAGCCAGACTTTTGGCGTCGCCTGGGACGACCCTGCCACCACCGCACCGGAAGCGTTTCGCTTTGATATCTGCGGCAGCGTTAGCGAACCGATTCCCGATAATCGTTATGGTGTGAGCAATGGTGAACTTACCGGTGGACGTTATGCCGTGGCCCGCCACGTTGGCGAGCTGGACGATATTTCACACACGGTATGGGGCATCATTCGCCACTGGCTGCCTGCAAGCGGCGAGAAAATGCGTAAAGCACCGATTCTGTTTCACTACACCAATCTTGCCGAAGGGGTGACAGAGCAGCGACTGGAAACGGATGTTTATGTGCCGTTGGCGTGA", - "dna_sequence_length": 483, - "functions": [ - "transcriptional repressor for mcbR biofilm gene" - ], - "id": "CDS_2973", - "location": [ - [ - "NC_000913", - 3169231, - "-", - 483 - ] - ], - "md5": "8257d0ae0c8687e74cb7b99af3c6a994", - "parent_gene": "", - "protein_md5": "3fe4a5416a2405f9dfe93ad88db2e9ef", - "protein_translation": "MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKETGLSPVNQSQTFGVAWDDPATTAPEAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVARHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGVTEQRLETDVYVPLA", - "protein_translation_length": 160, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130920" - ], - [ - "gene_synonym", - "EcoGene:EG13025" - ], - [ - "gene_synonym", - "JW2992" - ], - [ - "gene_synonym", - "b3024" - ], - [ - "gene_synonym", - "NP_417496.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009930" - ], - [ - "gene_synonym", - "ygiW" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADU5" - ], - [ - "gene_synonym", - "GeneID:946051" - ], - [ - "gene_synonym", - "ECK3015" - ] - ], - "dna_sequence": "ATGAAAAAATTCGCAGCAGTAATCGCAGTAATGGCCCTGTGCAGCGCACCGGTGATGGCAGCAGAGCAGGGCGGTTTTTCTGGCCCATCGGCAACGCAAAGTCAGGCCGGAGGATTCCAGGGGCCGAACGGCAGCGTAACGACTGTAGAAAGCGCAAAATCCCTGCGTGACGACACCTGGGTAACCCTGCGCGGCAATATCGTTGAACGCATCTCTGACGATCTCTACGTGTTCAAAGATGCCAGCGGTACTATCAATGTTGATATCGACCACAAACGCTGGAACGGCGTGACGGTGACGCCGAAAGATACGGTTGAGATTCAGGGTGAAGTCGATAAAGACTGGAATTCTGTTGAAATTGACGTCAAACAGATCCGCAAAGTAAATCCGTAA", - "dna_sequence_length": 393, - "functions": [ - "hydrogen peroxide and cadmium resistance periplasmic protein", - "stress-induced OB-fold protein" - ], - "id": "CDS_2974", - "location": [ - [ - "NC_000913", - 3169676, - "-", - 393 - ] - ], - "md5": "0b4cc9a6b35abd4bd99d936772327f6f", - "parent_gene": "", - "protein_md5": "08a9b1348813752b10bb807c80c4b69b", - "protein_translation": "MKKFAAVIAVMALCSAPVMAAEQGGFSGPSATQSQAGGFQGPNGSVTTVESAKSLRDDTWVTLRGNIVERISDDLYVFKDASGTINVDIDHKRWNGVTVTPKDTVEIQGEVDKDWNSVEIDVKQIRKVNP", - "protein_translation_length": 130, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P52076" - ], - [ - "gene_synonym", - "GI:16130921" - ], - [ - "gene_synonym", - "ASAP:ABE-0009936" - ], - [ - "gene_synonym", - "JW2993" - ], - [ - "gene_synonym", - "qseB" - ], - [ - "gene_synonym", - "preA" - ], - [ - "gene_synonym", - "b3025" - ], - [ - "gene_synonym", - "GeneID:945369" - ], - [ - "gene_synonym", - "NP_417497.1" - ], - [ - "gene_synonym", - "ygiX" - ], - [ - "gene_synonym", - "ECK3016" - ], - [ - "gene_synonym", - "EcoGene:EG13026" - ] - ], - "dna_sequence": "ATGCGAATTTTACTGATAGAAGATGACATGCTGATTGGCGACGGCATCAAAACGGGCCTTAGTAAAATGGGTTTTAGCGTCGACTGGTTTACACAAGGTCGTCAGGGAAAAGAGGCGCTTTATAGCGCACCTTATGATGCGGTGATCCTGGATTTAACCTTACCAGGCATGGATGGTCGCGATATTTTGCGCGAATGGCGAGAAAAAGGTCAGCGTGAGCCGGTACTGATCCTGACCGCGCGCGATGCGCTGGCGGAACGTGTAGAAGGGCTGCGTCTGGGAGCTGACGATTATCTGTGTAAACCTTTTGCGTTGATAGAAGTCGCCGCCAGGCTGGAAGCTCTGATGCGCCGAACCAACGGCCAGGCCAGCAACGAGCTGCGCCACGGTAACGTCATGCTCGACCCCGGCAAACGTATCGCCACGCTGGCTGGCGAACCCTTAACACTGAAACCAAAAGAATTTGCCCTGCTGGAATTACTGATGCGTAACGCTGGTCGGGTACTGTCGCGCAAACTGATTGAAGAGAAACTGTATACCTGGGACGAAGAGGTCACCAGTAATGCCGTTGAAGTGCATGTGCATCATCTGCGACGCAAACTCGGTAGTGATTTTATTCGTACCGTGCATGGTATTGGTTACACATTAGGTGAGAAATGA", - "dna_sequence_length": 660, - "functions": [ - "quorum sensing DNA-binding response regulator in two-component regulatory system with QseC" - ], - "id": "CDS_2975", - "location": [ - [ - "NC_000913", - 3169828, - "+", - 660 - ] - ], - "md5": "f393e5bf306c6175aea971f8c53aeda0", - "parent_gene": "", - "protein_md5": "626980a5f745e5065979b52104d034da", - "protein_translation": "MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVILDLTLPGMDGRDILREWREKGQREPVLILTARDALAERVEGLRLGADDYLCKPFALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLAGEPLTLKPKEFALLELLMRNAGRVLSRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGEK", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130922" - ], - [ - "gene_synonym", - "EcoGene:EG13027" - ], - [ - "gene_synonym", - "qseC" - ], - [ - "gene_synonym", - "ASAP:ABE-0009938" - ], - [ - "gene_synonym", - "NP_417498.1" - ], - [ - "gene_synonym", - "b3026" - ], - [ - "gene_synonym", - "preB" - ], - [ - "gene_synonym", - "GeneID:947174" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P40719" - ], - [ - "gene_synonym", - "ygiY" - ], - [ - "gene_synonym", - "JW2994" - ], - [ - "gene_synonym", - "ECK3017" - ] - ], - "dna_sequence": "ATGAAATTTACCCAACGTCTTAGTCTGCGCGTCAGGCTGACGCTAATCTTTTTAATTCTGGCCTCGGTGACCTGGCTGCTTTCCAGCTTTGTCGCCTGGAAACAAACAACGGATAACGTCGATGAATTGTTCGACACCCAACTGATGCTGTTTGCCAAGCGGTTAAGTACGCTCGATCTCAACGAAATCAACGCGGCGGATCGCATGGCACAGACGCCAAATAGATTAAAACACGGTCATGTTGATGACGATGCGCTGACCTTTGCCATCTTTACCCACGACGGCAGAATGGTCCTTAATGATGGCGATAACGGAGAAGATATTCCCTATAGCTATCAACGGGAAGGTTTTGCTGACGGGCAACTGGTCGGTGAAGACGATCCTTGGCGTTTTGTCTGGATGACCTCACCTGATGGCAAATATCGCATCGTTGTTGGCCAGGAATGGGAATACCGTGAAGACATGGCGCTGGCGATTGTTGCCGGGCAATTGATCCCGTGGCTGGTCGCACTGCCGATTATGTTAATCATCATGATGGTACTACTGGGTCGTGAACTCGCGCCGCTGAACAAACTGGCGCTGGCACTACGTATGCGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACTGGTTGAGTCGCTAAATCAACTGTTCGCCCGCACACATGCGATGATGGTTCGTGAACGACGCTTTACCTCCGACGCAGCTCACGAACTTCGTAGCCCGTTAACGGCGCTGAAAGTGCAAACCGAAGTTGCGCAGCTCTCTGACGATGATCCGCAGGCGCGGAAAAAAGCACTGCTCCAATTACATTCCGGGATCGATCGCGCTACTCGTCTGGTTGATCAACTGCTCACGCTATCGCGGCTGGACTCACTGGATAACCTTCAGGACGTCGCGGAGATCCCGCTTGAAGATCTCCTGCAATCGTCGGTGATGGATATTTACCACACGGCGCAGCAGGCGAAAATTGACGTGCGACTGACACTCAATGCCCACAGCATCAAACGCACCGGGCAACCGCTATTGCTAAGTTTGTTGGTGCGAAATTTGCTGGATAACGCCGTGCGCTACAGTCCACAGGGCAGCGTGGTAGACGTCACGCTGAATGCTGATAATTTCATCGTGAGGGATAACGGCCCCGGTGTGACACCAGAGGCACTGGCGCGAATTGGCGAACGCTTCTATCGCCCACCCGGACAAACCGCTACCGGCAGCGGGCTTGGGCTATCGATTGTCCAGCGAATCGCCAAATTGCATGGCATGAATGTTGAATTTGGGAATGCGGAACAAGGTGGATTTGAGGCGAAGGTAAGCTGGTAA", 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"gene_synonym", - "GeneID:946450" - ], - [ - "gene_synonym", - "EcoGene:EG13028" - ], - [ - "gene_synonym", - "ASAP:ABE-0009940" - ], - [ - "gene_synonym", - "JW2995" - ], - [ - "gene_synonym", - "b3027" - ], - [ - "gene_synonym", - "ECK3018" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46867" - ], - [ - "gene_synonym", - "ygiZ" - ] - ], - "dna_sequence": "ATGTTAAAGCAGAAAATTAAAACAATATTTGAAGCATTGCTATATATAATGCTTACTTATTGGTTAATAGATTCTTTTTTTGCTTTCAATAAGTATGACTGGATGCTTGAGTCGGGAGGAAATATTTGCAGTATACCTTCCGTTTCAGGCGAAGATCGTATATTGCAAGCAATGATTGCAGCATTTTTTCTTCTTACGCCACTTATTATTCTTATCTTAAGAAAACTCTTTATGCGGGAAATGTTCGAGTTTTGGGTATATGTATTCTCGCTCGGTATTTGTCTGGTTTGTGGTTGGTGGCTTTTTTGGGGACGGTTTATATTTTGCTATTAG", - "dna_sequence_length": 333, - "functions": [ - "inner membrane protein" - ], - "id": "CDS_2977", - "location": [ - [ - "NC_000913", - 3172211, - "-", - 333 - ] - ], - "md5": "d0f72698e48788249eb3c3c896286f06", - "parent_gene": "", - "protein_md5": "7430480ec15e900068ef45baa7e99ad3", - "protein_translation": "MLKQKIKTIFEALLYIMLTYWLIDSFFAFNKYDWMLESGGNICSIPSVSGEDRILQAMIAAFFLLTPLIILILRKLFMREMFEFWVYVFSLGICLVCGWWLFWGRFIFCY", - "protein_translation_length": 110, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3028" - ], - [ - "gene_synonym", - "GI:16130924" - ], - [ - "gene_synonym", - "GeneID:947512" - ], - [ - "gene_synonym", - "JW2996" - ], - [ - "gene_synonym", - "EcoGene:EG12656" - ], - [ - "gene_synonym", - "ECK3019" - ], - [ - "gene_synonym", - "ASAP:ABE-0009946" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEY5" - ], - [ - "gene_synonym", - "mda66" - ], - [ - "gene_synonym", - "NP_417500.1" - ], - [ - "gene_synonym", - "mdaB" - ] - ], - "dna_sequence": "ATGAGCAACATCCTGATTATCAACGGCGCGAAAAAATTCGCCCACTCCAATGGTCAACTGAACGACACCCTGACCGAAGTCGCGGATGGCACACTGCGCGACCTTGGGCATGATGTCCGCATCGTTCGCGCCGACAGCGACTACGATGTCAAAGCGGAAGTACAAAACTTTCTCTGGGCTGATGTGGTGATCTGGCAGATGCCAGGCTGGTGGATGGGCGCGCCGTGGACAGTGAAAAAATACATTGATGATGTATTCACCGAAGGTCACGGGACGCTGTATGCCAGCGATGGTCGTACCCGCAAAGATCCGTCGAAAAAATACGGTTCCGGCGGCCTGGTACAGGGCAAAAAATATATGCTTTCTCTGACCTGGAACGCACCAATGGAAGCCTTCACCGAAAAAGATCAGTTCTTCCACGGCGTTGGCGTTGACGGTGTGTATCTGCCGTTCCATAAAGCAAACCAATTCCTCGGTATGGAACCGCTGCCGACATTTATCGCTAATGACGTGATAAAAATGCCTGATGTTCCCCGCTATACTGAAGAATATCGCAAGCATCTTGTGGAAATTTTTGGTTAA", - "dna_sequence_length": 582, - "functions": [ - "NADPH quinone reductase" - ], - "id": "CDS_2978", - "location": [ - [ - "NC_000913", - 3172530, - "+", - 582 - ] - ], - "md5": "a57a88c3bbd41465dab6691459fc6309", - "parent_gene": "", - "protein_md5": "28a8b4a3d9a5ea8750cd2036f45b4819", - "protein_translation": "MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRADSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGMEPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG", - "protein_translation_length": 193, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3029" - ], - [ - "gene_synonym", - "GeneID:947506" - ], - [ - "gene_synonym", - "GI:16130925" - ], - [ - "gene_synonym", - "EcoGene:EG12657" - ], - [ - "gene_synonym", - "JW2997" - ], - [ - "gene_synonym", - "ygiN" - ], - [ - "gene_synonym", - "ECK3020" - ], - [ - "gene_synonym", - "NP_417501.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009948" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADU2" - ] - ], - "dna_sequence": "ATGCTTACCGTAATCGCAGAAATCCGTACTCGTCCTGGTCAACATCACCGTCAGGCGGTATTGGATCAGTTTGCTAAAATCGTTCCAACCGTACTGAAAGAAGAAGGTTGCCACGGCTATGCGCCAATGGTGGATTGCGCAGCTGGCGTGAGTTTCCAGTCTATGGCACCGGATTCTATCGTGATGATTGAGCAGTGGGAAAGCATCGCGCATCTTGAAGCGCATCTGCAAACCCCGCACATGAAGGCGTATAGCGAAGCCGTAAAAGGTGACGTGCTGGAGATGAATATCCGTATTCTGCAGCCAGGGATTTAA", - "dna_sequence_length": 315, - "functions": [ - "quinol monooxygenase" - ], - "id": "CDS_2979", - "location": [ - [ - "NC_000913", - 3173142, - "+", - 315 - ] - ], - "md5": "5019f17c2d1955714790c3fd37e67249", - "parent_gene": "", - "protein_md5": "f69c64219e2f9f7854c82b7c6d5a6bc7", - "protein_translation": "MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMVDCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQPGI", - "protein_translation_length": 104, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10687" - ], - [ - "gene_synonym", - "parE" - ], - [ - "gene_synonym", - "JW2998" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P20083" - ], - [ - "gene_synonym", - "GI:16130926" - ], - [ - "gene_synonym", - "NP_417502.1" - ], - [ - "gene_synonym", - "b3030" - ], - [ - "gene_synonym", - "ECK3021" - ], - [ - "gene_synonym", - "nfxD" - ], - [ - "gene_synonym", - "ASAP:ABE-0009950" - ], - [ - "gene_synonym", - "GeneID:947501" - ] - ], - "dna_sequence": "ATGACGCAAACTTATAACGCTGATGCCATTGAGGTACTCACCGGGCTTGAGCCGGTTCGCCGCCGTCCGGGGATGTATACCGATACCACTCGCCCTAACCATTTGGGGCAAGAAGTCATTGATAACAGTGTGGATGAAGCACTGGCGGGTCACGCAAAACGCGTGGACGTTATTTTACATGCTGACCAGTCGTTAGAAGTTATTGACGATGGGCGCGGGATGCCGGTGGATATTCACCCGGAAGAGGGTGTACCGGCGGTTGAACTGATTCTTTGCCGTCTGCATGCAGGCGGTAAATTCTCTAACAAAAATTACCAGTTCTCTGGCGGCCTGCATGGCGTGGGGATTTCGGTGGTTAACGCCCTGTCGAAGCGCGTAGAAGTTAACGTGCGCCGCGATGGTCAGGTTTATAACATCGCCTTTGAAAATGGCGAAAAGGTGCAGGATTTACAGGTTGTCGGCACTTGCGGTAAACGCAATACTGGTACCAGTGTGCACTTCTGGCCGGATGAAACCTTCTTTGACAGCCCGCGATTTTCTGTTTCACGCCTGACGCATGTGCTGAAAGCCAAAGCGGTATTGTGCCCTGGCGTTGAGATCACTTTTAAAGATGAGATCAACAATACCGAACAACGCTGGTGCTATCAGGACGGTCTGAATGATTACCTGGCGGAAGCGGTAAATGGTCTGCCGACGCTGCCGGAAAAACCGTTTATCGGTAATTTCGCTGGTGATACTGAAGCTGTGGACTGGGCGCTACTGTGGCTGCCGGAAGGCGGTGAACTGCTGACCGAAAGCTACGTCAACCTTATCCCAACGATGCAGGGCGGTACCCATGTTAATGGTCTGCGTCAGGGCCTGTTGGACGCGATGCGTGAGTTCTGTGAATACCGCAATATTCTGCCGCGCGGTGTAAAGCTGTCGGCGGAAGATATCTGGGATCGCTGCGCCTATGTGCTGTCAGTAAAAATGCAGGATCCGCAGTTTGCCGGGCAGACGAAAGAGCGTCTCTCTTCGCGTCAATGCGCGGCATTCGTTTCTGGCGTGGTGAAAGATGCCTTTATCCTGTGGCTGAACCAGAACGTTCAGGCGGCTGAACTGCTGGCGGAGATGGCGATTTCCAGCGCCCAGCGCCGTATGCGTGCGGCCAAAAAAGTGGTGCGTAAAAAGCTGACCAGCGGCCCGGCGTTGCCTGGCAAACTGGCTGATTGTACCGCGCAGGACCTTAACCGTACCGAGCTGTTCCTTGTGGAAGGTGACTCCGCAGGCGGATCTGCCAAGCAGGCGCGCGATCGCGAATATCAGGCGATCATGCCACTGAAAGGTAAGATCCTTAACACCTGGGAAGTCTCTTCCGACGAAGTGCTGGCTTCGCAGGAAGTGCACGATATTTCGGTAGCGATCGGTATCGATCCTGACAGCGACGATCTGAGCCAGCTTCGTTATGGCAAAATCTGTATCCTCGCGGATGCGGACTCTGATGGTCTGCACATTGCCACGCTGCTCTGCGCTTTGTTCGTAAAACATTTCCGCGCGTTGGTGAAACACGGTCACGTTTACGTCGCACTGCCACCGCTCTACCGTATTGATCTCGGGAAAGAGGTTTATTACGCGCTGACGGAAGAAGAGAAAGAGGGCGTACTTGAGCAATTAAAACGCAAGAAAGGCAAGCCGAACGTCCAGCGTTTTAAAGGTCTGGGGGAAATGAACCCGATGCAATTGCGCGAAACCACGCTTGATCCGAACACTCGCCGTCTGGTGCAGTTGACTATCGATGATGAAGACGATCAGCGTACTGACGCGATGATGGATATGCTGCTGGCGAAGAAACGCTCGGAAGATCGCCGCAACTGGTTGCAAGAGAAAGGCGACATGGCGGAGATTGAGGTTTAA", 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"type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW2999" - ], - [ - "gene_synonym", - "GI:16130927" - ], - [ - "gene_synonym", - "ASAP:ABE-0009953" - ], - [ - "gene_synonym", - "NP_417503.1" - ], - [ - "gene_synonym", - "b3031" - ], - [ - "gene_synonym", - "yqiA" - ], - [ - "gene_synonym", - "ECK3022" - ], - [ - "gene_synonym", - "yzzI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8Z7" - ], - [ - "gene_synonym", - "GeneID:947488" - ], - [ - "gene_synonym", - "EcoGene:EG12186" - ] - ], - "dna_sequence": "ATGTCTACGCTTCTTTATTTACACGGTTTCAACAGCTCGCCGCGCTCTGCAAAAGCGAGCTTGTTAAAAAACTGGCTGGCGGAACATCACCCTGACGTTGAGATGATCATTCCGCAGTTGCCGCCGTATCCTTCCGACGCGGCAGAGCTGCTGGAATCCATTGTCCTGGAACATGGCGGTGATTCGCTGGGTATTGTCGGTTCGTCACTGGGGGGATATTACGCCACCTGGTTGTCACAATGTTTTATGCTGCCCGCAGTGGTGGTAAACCCGGCGGTGCGCCCGTTTGAACTGCTGACGGACTATCTCGGTCAGAACGAGAACCCCTACACCGGGCAGCAATATGTGCTAGAGTCACGCCATATTTACGATCTTAAAGTCATGCAGATTGACCCGCTGGAAGCGCCGGATTTGATCTGGCTGCTGCAACAGACGGGAGATGAAGTGCTGGATTACCGCCAGGCGGTGGCGTACTACGCTTCCTGCCGCCAGACTGTCATAGAAGGCGGCAACCACGCATTCACGGGCTTCGAAGATTATTTCAACCCGATCGTCGATTTTCTTGGTCTGCACCATCTCTGA", - "dna_sequence_length": 582, - "functions": [ - "acyl CoA esterase" - ], - "id": "CDS_2981", - "location": [ - [ - "NC_000913", - 3176006, - "-", - 582 - ] - ], - "md5": "cddcdb276dd050d8da23e5d92b79bad3", - "parent_gene": "", - "protein_md5": "ef0dad65ad91b11ac442e559dda68e16", - "protein_translation": "MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYPSDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDYLGQNENPYTGQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYASCRQTVIEGGNHAFTGFEDYFNPIVDFLGLHHL", - "protein_translation_length": 193, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417504.1" - ], - [ - "gene_synonym", - "EcoGene:EG12187" - ], - [ - "gene_synonym", - "cpdA" - ], - [ - "gene_synonym", - "GI:16130928" - ], - [ - "gene_synonym", - "b3032" - ], - [ - "gene_synonym", - "JW3000" - ], - [ - "gene_synonym", - "ECK3023" - ], - [ - "gene_synonym", - "icc" - ], - [ - "gene_synonym", - "ASAP:ABE-0009957" - ], - [ - "gene_synonym", - "GeneID:947515" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEW4" - ] - ], - "dna_sequence": "TTGGAAAGCCTGTTAACCCTTCCTCTGGCTGGTGAGGCCAGAGTCAGGATTTTACAAATTACCGACACTCACCTGTTTGCACAAAAGCACGAAGCCCTGTTAGGGGTAAACACCTGGGAGAGTTACCAGGCGGTGCTGGAGGCGATTCGGCCACACCAGCACGAATTCGACCTGATTGTCGCGACAGGTGATTTAGCGCAGGATCAATCCTCTGCGGCCTATCAGCATTTCGCTGAAGGCATCGCAAGTTTTCGTGCGCCCTGCGTCTGGCTGCCGGGCAACCACGATTTCCAGCCCGCGATGTACAGCGCGTTACAGGATGCGGGTATCTCCCCGGCGAAGCGCGTGTTTATTGGTGAGCAATGGCAAATCCTGTTGCTGGATAGCCAGGTGTTTGGCGTGCCGCACGGTGAGCTGAGCGAGTTTCAGCTTGAGTGGCTGGAACGTAAACTGGCCGATGCGCCAGAACGCCATACGTTGCTGCTGCTGCATCATCATCCGCTACCTGCGGGTTGTAGTTGGCTCGATCAACACAGTCTGCGTAACGCGGGCGAACTGGATACCGTGCTGGCGAAGTTTCCGCACGTCAAATACTTGCTGTGCGGTCATATTCATCAGGAGCTGGATCTCGACTGGAATGGTCGCCGCCTGCTGGCAACGCCGTCGACCTGTGTGCAGTTTAAGCCGCACTGTTCCAACTTTACGCTGGATACCATCGCGCCCGGCTGGCGTACTCTCGAGTTACATGCTGATGGCACGCTGACCACCGAGGTGCATCGCCTGGCGGACACACGTTTCCAACCTGATACCGCTTCAGAAGGCTACTGA", - "dna_sequence_length": 828, - "functions": [ - "3',5' cAMP phosphodiesterase" - ], - "id": "CDS_2982", - "location": [ - [ - "NC_000913", - 3176833, - "-", - 828 - ] - ], - "md5": "de6c479f15eb1d344c2493f3f618013d", - "parent_gene": "", - "protein_md5": "e8adcf72127499abb7f967102ffbd308", - "protein_translation": "MESLLTLPLAGEARVRILQITDTHLFAQKHEALLGVNTWESYQAVLEAIRPHQHEFDLIVATGDLAQDQSSAAYQHFAEGIASFRAPCVWLPGNHDFQPAMYSALQDAGISPAKRVFIGEQWQILLLDSQVFGVPHGELSEFQLEWLERKLADAPERHTLLLLHHHPLPAGCSWLDQHSLRNAGELDTVLAKFPHVKYLLCGHIHQELDLDWNGRRLLATPSTCVQFKPHCSNFTLDTIAPGWRTLELHADGTLTTEVHRLADTRFQPDTASEGY", - "protein_translation_length": 275, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947518" - ], - [ - "gene_synonym", - "EcoGene:EG12185" - ], - [ - "gene_synonym", - "GI:16130929" - ], - [ - "gene_synonym", - "ECK3024" - ], - [ - "gene_synonym", - "b3033" - ], - [ - "gene_synonym", - "JW3001" - ], - [ - "gene_synonym", - "yqiB" - ], - [ - "gene_synonym", - "yzzH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADU7" - ], - [ - "gene_synonym", - "ASAP:ABE-0009959" - ], - [ - "gene_synonym", - "NP_417505.1" - ] - ], - "dna_sequence": "ATGAAGCGTTACACACCTGACTTTCCTGAAATGATGCGCCTGTGCGAGATGAACTTTTCACAATTGCGCCGTTTGTTACCGCGCAATGACGCACCCGGCGAAACTGTAAGCTATCAGGTGGCAAACGCACAATATCGGCTGACGATTGTGGAATCGACCCGATACACTACCCTGGTGACAATAGAACAGACTGCGCCCGCGATCAGTTACTGGAGCCTTCCGTCAATGACGGTGCGTCTGTATCATGACGCGATGGTGGCTGAAGTGTGTTCAAGCCAGCAGATTTTTCGCTTCAAAGCGCGGTATGATTATCCTAATAAAAAGTTGCATCAACGCGACGAAAAGCATCAAATTAATCAGTTTTTAGCGGACTGGTTGCGATACTGTTTAGCACATGGAGCGATGGCGATTCCGGTTTATTAG", - "dna_sequence_length": 423, - "functions": [ - "DUF1249 protein YqiB" - ], - "id": "CDS_2983", - "location": [ - [ - "NC_000913", - 3177280, - "-", - 423 - ] - ], - "md5": "693b4b7ffc6d9366f65c4dfbfa2929da", - "parent_gene": "", - "protein_md5": "829ccc807bb107b78bc485e05956cfac", - "protein_translation": "MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQYRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARYDYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY", - "protein_translation_length": 140, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130930" - ], - [ - "gene_synonym", - "trgB" - ], - [ - "gene_synonym", - "NP_417506.1" - ], - [ - "gene_synonym", - "EcoGene:EG12184" - ], - [ - "gene_synonym", - "nudF" - ], - [ - "gene_synonym", - "rdsA" - ], - [ - "gene_synonym", - "b3034" - ], - [ - "gene_synonym", - "JW3002" - ], - [ - "gene_synonym", - "ASAP:ABE-0009961" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q93K97" - ], - [ - "gene_synonym", - "aspP" - ], - [ - "gene_synonym", - "ECK3025" - ], - [ - "gene_synonym", - "yzzG" - ], - [ - "gene_synonym", - "yqiE" - ], - [ - "gene_synonym", - "adpP" - ], - [ - "gene_synonym", - "GeneID:947519" - ] - ], - "dna_sequence": "ATGCTTAAGCCAGACAACCTGCCCGTTACATTTGGCAAAAACGATGTAGAAATTATTGCACGAGAAACACTTTATCGCGGCTTTTTTTCATTAGATCTTTATAGATTTCGTCATCGTCTATTCAACGGGCAAATGAGTCATGAGGTGCGGCGGGAAATTTTTGAGCGCGGTCACGCCGCAGTCTTGCTACCCTTTGACCCAGTGCGTGATGAAGTTGTGCTGATTGAGCAGATTCGGATTGCCGCGTACGACACCAGCGAAACCCCTTGGCTACTGGAGATGGTTGCCGGGATGATTGAAGAGGGTGAAAGTGTGGAAGATGTTGCCCGTCGCGAAGCGATTGAAGAGGCGGGACTGATAGTCAAACGGACCAAACCGGTGTTAAGTTTCCTGGCAAGCCCGGGGGGCACCAGTGAGCGTTCGTCAATTATGGTGGGCGAAGTGGACGCCACGACCGCAAGCGGTATTCACGGTCTGGCTGATGAAAACGAAGATATTCGCGTTCATGTGGTAAGCCGGGAACAGGCATACCAGTGGGTAGAAGAGGGGAAAATCGACAACGCAGCGTCGGTCATCGCTTTGCAATGGCTGCAGCTGCATCATCAAGCGTTAAAAAATGAGTGGGCATAA", - "dna_sequence_length": 630, - "functions": [ - "ADP-ribose pyrophosphatase" - ], - "id": "CDS_2984", - "location": [ - [ - "NC_000913", - 3177910, - "-", - 630 - ] - ], - "md5": "19bd253458afd46cd25ea0140c0d7983", - "parent_gene": "", - "protein_md5": "b18f416701102b3c46e36034fc406489", - "protein_translation": "MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHQALKNEWA", - "protein_translation_length": 209, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111528" - ], - [ - "gene_synonym", - "mtcB" - ], - [ - "gene_synonym", - "ASAP:ABE-0009965" - ], - [ - "gene_synonym", - "b3035" - ], - [ - "gene_synonym", - "NP_417507.2" - ], - [ - "gene_synonym", - "mukA" - ], - [ - "gene_synonym", - "GeneID:947521" - ], - [ - "gene_synonym", - "refI" - ], - [ - "gene_synonym", - "JW5503" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02930" - ], - [ - "gene_synonym", - "colE1-i" - ], - [ - "gene_synonym", - "tolC" - ], - [ - "gene_synonym", - "toc" - ], - [ - "gene_synonym", - "EcoGene:EG11009" - ], - [ - "gene_synonym", - "weeA" - ], - [ - "gene_synonym", - "ECK3026" - ] - ], - "dna_sequence": "ATGAAGAAATTGCTCCCCATTCTTATCGGCCTGAGCCTTTCTGGGTTCAGTTCGTTGAGCCAGGCCGAGAACCTGATGCAAGTTTATCAGCAAGCACGCCTTAGTAACCCGGAATTGCGTAAGTCTGCCGCCGATCGTGATGCTGCCTTTGAAAAAATTAATGAAGCGCGCAGTCCATTACTGCCACAGCTAGGTTTAGGTGCAGATTACACCTATAGCAACGGCTACCGCGACGCGAACGGCATCAACTCTAACGCGACCAGTGCGTCCTTGCAGTTAACTCAATCCATTTTTGATATGTCGAAATGGCGTGCGTTAACGCTGCAGGAAAAAGCAGCAGGGATTCAGGACGTCACGTATCAGACCGATCAGCAAACCTTGATCCTCAACACCGCGACCGCTTATTTCAACGTGTTGAATGCTATTGACGTTCTTTCCTATACACAGGCACAAAAAGAAGCGATCTACCGTCAATTAGATCAAACCACCCAACGTTTTAACGTGGGCCTGGTAGCGATCACCGACGTGCAGAACGCCCGCGCACAGTACGATACCGTGCTGGCGAACGAAGTGACCGCACGTAATAACCTTGATAACGCGGTAGAGCAGCTGCGCCAGATCACCGGTAACTACTATCCGGAACTGGCTGCGCTGAATGTCGAAAACTTTAAAACCGACAAACCACAGCCGGTTAACGCGCTGCTGAAAGAAGCCGAAAAACGCAACCTGTCGCTGTTACAGGCACGCTTGAGCCAGGACCTGGCGCGCGAGCAAATTCGCCAGGCGCAGGATGGTCACTTACCGACTCTGGATTTAACGGCTTCTACCGGGATTTCTGACACCTCTTATAGCGGTTCGAAAACCCGTGGTGCCGCTGGTACCCAGTATGACGATAGCAATATGGGCCAGAACAAAGTTGGCCTGAGCTTCTCGCTGCCGATTTATCAGGGCGGAATGGTTAACTCGCAGGTGAAACAGGCACAGTACAACTTTGTCGGTGCCAGCGAGCAACTGGAAAGTGCCCATCGTAGCGTCGTGCAGACCGTGCGTTCCTCCTTCAACAACATTAATGCATCTATCAGTAGCATTAACGCCTACAAACAAGCCGTAGTTTCCGCTCAAAGCTCATTAGACGCGATGGAAGCGGGCTACTCGGTCGGTACGCGTACCATTGTTGATGTGTTGGATGCGACCACCACGTTGTACAACGCCAAGCAAGAGCTGGCGAATGCGCGTTATAACTACCTGATTAATCAGCTGAATATTAAGTCAGCTCTGGGTACGTTGAACGAGCAGGATCTGCTGGCACTGAACAATGCGCTGAGCAAACCGGTTTCCACTAATCCGGAAAACGTTGCACCGCAAACGCCGGAACAGAATGCTATTGCTGATGGTTATGCGCCTGATAGCCCGGCACCAGTCGTTCAGCAAACATCCGCACGCACTACCACCAGTAACGGTCATAACCCTTTCCGTAACTGA", - "dna_sequence_length": 1482, - "functions": [ - "transport channel" - ], - "id": "CDS_2985", - "location": [ - [ - "NC_000913", - 3178115, - "+", - 1482 - ] - ], - "md5": "a432ab613769bc8513e77bee7eeaf25c", - "parent_gene": "", - "protein_md5": "43c25df8e3937e9cf2d501de8338fc94", - "protein_translation": "MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAALNVENFKTDKPQPVNALLKEAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTNPENVAPQTPEQNAIADGYAPDSPAPVVQQTSARTTTSNGHNPFRN", - "protein_translation_length": 493, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADT2" - ], - [ - "gene_synonym", - "ygiB" - ], - [ - "gene_synonym", - "NP_417509.3" - ], - [ - "gene_synonym", - "ASAP:ABE-0009969" - ], - [ - "gene_synonym", - "GI:145698308" - ], - [ - "gene_synonym", - "b3037" - ], - [ - "gene_synonym", - "GeneID:945086" - ], - [ - "gene_synonym", - "JW5927" - ], - [ - "gene_synonym", - "EcoGene:EG11164" - ], - [ - "gene_synonym", - "ECK3028" - ] - ], - "dna_sequence": "ATGAAACGGACAAAATCCATACGCCACGCATCGTTCCGCAAAAACTGGAGCGCACGCCATCTGACACCAGTCGCTCTCGCGGTTGCCACTGTTTTTATGCTGGCTGGCTGTGAAAAGAGTGATGAAACAGTGTCTCTCTATCAAAATGCTGACGACTGTTCAGCTGCAAACCCAGGCAAAAGCGCCGAATGTACCACCGCGTACAACAATGCGCTGAAAGAAGCCGAACGTACTGCGCCGAAATACGCCACCCGTGAAGACTGTGTTGCTGAATTTGGTGAAGGTCAGTGCCAGCAGGCACCAGCCCAGGCTGGCATGGCACCAGAAAACCAGGCGCAGGCCCAGCAATCCAGCGGGAGTTTCTGGATGCCGCTGATGGCCGGTTACATGATGGGGCGTCTGATGGGCGGCGGCGCGGGATTTGCACAGCAGCCGCTGTTCTCCTCGAAAAACCCAGCCAGTCCGGCTTACGGTAAATATACCGACGCGACGGGTAAAAACTATGGCGCAGCCCAGCCAGGCCGCACCATGACCGTACCGAAGACGGCAATGGCACCAAAACCGGCGACCACCACTACCGTTACCCGTGGCGGTTTTGGTGAATCTGTTGCCAAACAAAGCACTATGCAGCGTAGTGCAACCGGTACCTCTTCTCGTTCAATGGGTGGCTGA", - "dna_sequence_length": 672, - "functions": [ - "DUF1190 family protein" - ], - "id": "CDS_2986", - "location": [ - [ - "NC_000913", - 3179744, - "+", - 672 - ] - ], - "md5": "0ec38ac0b51734e98d87466060b50198", - "parent_gene": "", - "protein_md5": "1e5087778c85c4bd82c5db4cfe1124f6", - "protein_translation": "MKRTKSIRHASFRKNWSARHLTPVALAVATVFMLAGCEKSDETVSLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPAQAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKYTDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSATGTSSRSMGG", - "protein_translation_length": 223, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygiC" - ], - [ - "gene_synonym", - "GI:16130934" - ], - [ - "gene_synonym", - "GeneID:947249" - ], - [ - "gene_synonym", - "b3038" - ], - [ - "gene_synonym", - "JW3006" - ], - [ - "gene_synonym", - "NP_417510.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009971" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADT5" - ], - [ - "gene_synonym", - "EcoGene:EG11165" - ], - [ - "gene_synonym", - "ECK3029" - ] - ], - "dna_sequence": "ATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTACGGCGAGCCGTACTGGTGTGAAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCGAACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACCAAATTCCGCATTCCAAAACACACCTGGAGTTTTGTGCGCCAGTCATGGCTGACGCACCAGCCATCGCTTTATTCGCGTCTTGATCTGGCGTGGGATGGCACTGGTGAACCTAAACTTCTGGAAAATAACGCCGATACGCCAACGTCACTATACGAGGCGGCGTTCTTTCAGTGGATCTGGCTGGAAGATCAGCTTAACGCCGGTAACTTGCCGGAGGGCAGCGACCAGTTTAACAGTCTGCAAGAAAAACTGATCGATCGCTTCGTTGAGCTGCGTGAACAGTATGGCTTCCAGTTGCTGCATCTCACCTGCTGTCGCGACACGGTGGAAGATCGCGGAACCATTCAGTATTTGCAGGACTGCGCAACGGAAGCTGAAATTGCTACTGAGTTCCTCTACATCGATGATATCGGGTTAGGTGAAAAAGGTCAGTTCACGGATTTACAGGATCAGGTAATTTCCAACCTGTTCAAACTGTATCCGTGGGAATTTATGTTGCGTGAGATGTTCTCAACCAAGCTGGAGGATGCAGGCGTACGCTGGCTGGAACCGGCGTGGAAGAGCATTATCTCCAACAAGGCACTTCTACCGCTACTGTGGGAGATGTTCCCGAATCACCCGAACCTGCTGCCCGCTTATTTTGCGGAAGATGATCATCCGCAAATGGAAAAATATGTGGTTAAACCGATCTTCTCCCGTGAAGGCGCAAACGTGTCGATCATTGAGAACGGCAAAACCATTGAAGCAGCGGAAGGTCCGTATGGCGAAGAAGGGATGATTGTTCAGCAATTCCACCCGTTACCGAAATTCGGCGACAGCTATATGCTGATTGGTAGCTGGCTGGTGAACGATCAACCCGCCGGAATTGGCATTCGTGAAGACCGTGCATTGATCACCCAGGATATGTCTCGGTTTTATCCACATATTTTTGTTGAATAA", 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[ - "gene_synonym", - "NP_417511.2" - ], - [ - "gene_synonym", - "GeneID:946447" - ], - [ - "gene_synonym", - "ECK3030" - ], - [ - "gene_synonym", - "GI:226524747" - ], - [ - "gene_synonym", - "EcoGene:EG11166" - ] - ], - "dna_sequence": "ATGTCTTCAACACGTATGCCAGCATTGTTTTTAGGTCACGGTAGTCCGATGAACGTGCTGGAAGATAATTTGTATACCCGCAGCTGGCAGAAGTTGGGGATGACATTGCCACGCCCGCAAGCGATTGTGGTGGTTTCGGCTCACTGGTTTACCCGTGGAACAGGAGTGACCGCGATGGAGACGCCGCCCACGATTCATGACTTTGGTGGCTTCCCGCAGGCGCTGTACGATACGCATTATCCTGCTCCGGGTTCGCCTGCGCTGGCACAGCGTCTGGTTGAGCTGTTAGCGCCGATCCCGGTGACGCTGGATAAAGAAGCCTGGGGCTTTGACCACGGCTCGTGGGGCGTGCTGATTAAGATGTATCCTGACGCTGATATCCCGATGGTGCAGTTGAGTATCGACAGTAGCAAACCTGCCGCCTGGCATTTCGAAATGGGGCGCAAACTGGCAGCGCTGCGAGATGAAGGAATAATGTTGGTCGCCAGCGGTAACGTGGTGCATAACCTGCGCACAGTGAAGTGGCACGGTGATAGTTCACCGTATCCGTGGGCGACGTCGTTTAATGAGTATGTGAAAGCGAATCTGACGTGGCAAGGGCCAGTGGAACAACATCCTCTGGTGAATTACCTCGACCATGAAGGTGGCACGTTATCGAACCCAACGCCAGAGCATTATTTGCCGTTGTTGTATGTGTTAGGTGCGTGGGATGGGCAGGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAA", - "dna_sequence_length": 789, - "functions": [ - "4,5- DOPA-extradiol-dioxygenase" - ], - "id": "CDS_2988", - "location": [ - [ - "NC_000913", - 3182407, - "-", - 789 - ] - ], - "md5": "492fa3d2dc934cb41d8463508ed77178", - "parent_gene": "", - "protein_md5": "21e1252d555f2c6f08dacd2c8440e7ea", - "protein_translation": "MSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMTLPRPQAIVVVSAHWFTRGTGVTAMETPPTIHDFGGFPQALYDTHYPAPGSPALAQRLVELLAPIPVTLDKEAWGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLAALRDEGIMLVASGNVVHNLRTVKWHGDSSPYPWATSFNEYVKANLTWQGPVEQHPLVNYLDHEGGTLSNPTPEHYLPLLYVLGAWDGQEPITIPVEGIEMGSLSMLSVQIG", - "protein_translation_length": 262, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygiE" - ], - [ - "gene_synonym", - "JW3008" - ], - [ - "gene_synonym", - "ASAP:ABE-0009977" - ], - [ - "gene_synonym", - "GI:16130936" - ], - [ - "gene_synonym", - "ECK3031" - ], - [ - "gene_synonym", - "zupT" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8H3" - ], - [ - "gene_synonym", - "NP_417512.1" - ], - [ - "gene_synonym", - "EcoGene:EG11167" - ], - [ - "gene_synonym", - "b3040" - ], - [ - "gene_synonym", - "GeneID:947035" - ] - ], - "dna_sequence": "ATGTCAGTACCTCTCATTCTGACCATACTGGCGGGGGCAGCCACGTTTATTGGCGCGTTTCTCGGCGTTCTCGGGCAAAAACCCTCGAACCGCTTACTGGCGTTTTCGCTAGGTTTTGCGGCGGGGATCATGTTGCTCATCTCATTAATGGAAATGCTTCCTGCCGCACTAGCAGCTGAAGGAATGTCGCCTGTGTTGGGTTATGGAATGTTTATCTTCGGTCTGCTTGGCTATTTTGGCCTGGACCGCATGTTGCCACATGCTCATCCGCAGGATTTAATGCAAAAATCGGTGCAGCCGTTGCCAAAATCGATCAAGCGCACAGCCATTCTGCTCACTCTCGGCATCAGTCTGCATAACTTCCCGGAAGGGATTGCCACCTTTGTCACGGCGAGCAGCAACCTGGAGCTGGGATTTGGCATCGCACTGGCCGTCGCGTTGCACAATATCCCTGAAGGTCTGGCAGTGGCAGGCCCGGTTTATGCGGCAACGGGGTCTAAACGCACCGCGATTCTGTGGGCGGGGATTTCTGGACTAGCAGAAATTCTTGGTGGTGTGCTGGCGTGGTTAATCCTCGGTAGCATGATTTCCCCGGTGGTCATGGCGGCAATCATGGCGGCGGTTGCAGGAATTATGGTGGCGCTCTCGGTTGATGAATTAATGCCGCTCGCCAAAGAGATTGACCCTAATAATAACCCCAGCTATGGCGTACTATGTGGAATGTCAGTGATGGGATTCAGTTTAGTGCTGCTACAAACGGCGGGAATTGGTTAA", - "dna_sequence_length": 774, - "functions": [ - "zinc transporter" - ], - "id": "CDS_2989", - "location": [ - [ - "NC_000913", - 3182550, - "+", - 774 - ] - ], - "md5": "00b172f1effe56eb0cab75dafb0c8104", - "parent_gene": "", - "protein_md5": "265d0972bd15046d7555cfda792abe62", - "protein_translation": "MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIMLLISLMEMLPAALAAEGMSPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLPKSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPVYAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAIMAAVAGIMVALSVDELMPLAKEIDPNNNPSYGVLCGMSVMGFSLVLLQTAGIG", - "protein_translation_length": 257, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7J0" - ], - [ - "gene_synonym", - "JW3009" - ], - [ - "gene_synonym", - "GeneID:947526" - ], - [ - "gene_synonym", - "GI:16130937" - ], - [ - "gene_synonym", - "luxH" - ], - [ - "gene_synonym", - "EcoGene:EG10465" - ], - [ - "gene_synonym", - "ECK3032" - ], - [ - "gene_synonym", - "htrP" - ], - [ - "gene_synonym", - "ribB" - ], - [ - "gene_synonym", - "NP_417513.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009980" - ], - [ - "gene_synonym", - "b3041" - ] - ], - "dna_sequence": "ATGAATCAGACGCTACTTTCCTCTTTTGGTACGCCTTTCGAACGTGTTGAAAATGCACTGGCTGCGCTGCGTGAAGGACGCGGTGTAATGGTGCTTGATGATGAAGACCGTGAAAACGAAGGTGATATGATCTTCCCGGCAGAAACCATGACTGTTGAGCAGATGGCGCTGACCATTCGCCACGGTAGCGGTATTGTTTGCCTGTGCATTACTGAAGATCGCCGTAAACAACTCGATCTGCCAATGATGGTAGAAAATAACACCAGCGCCTATGGCACCGGTTTTACCGTGACCATTGAAGCAGCTGAAGGTGTGACTACCGGTGTTTCTGCCGCTGACCGTATTACGACCGTTCGCGCAGCGATTGCCGATGGCGCAAAACCGTCAGATCTGAATCGTCCTGGCCACGTTTTCCCACTTCGCGCTCAGGCAGGTGGTGTACTGACGCGTGGCGGTCATACTGAAGCAACTATTGATCTGATGACGCTGGCAGGCTTTAAACCGGCTGGTGTACTGTGTGAGCTGACTAATGACGATGGCACGATGGCGCGTGCACCAGAGTGTATTGAGTTTGCCAATAAACACAATATGGCGCTCGTGACTATTGAAGACCTGGTGGCATACCGTCAGGCACATGAGCGTAAAGCCAGCTGA", - "dna_sequence_length": 654, - "functions": [ - "3,4-dihydroxy-2-butanone-4-phosphate synthase" - ], - "id": "CDS_2990", - "location": [ - [ - "NC_000913", - 3184466, - "-", - 654 - ] - ], - "md5": "f73d389af15351e5348880f6b4e267c2", - "parent_gene": "", - "protein_md5": "7a0ee251aebd17f34ee42e9d84f7869d", - "protein_translation": "MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS", - "protein_translation_length": 217, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG13031" - ], - [ - "gene_synonym", - "NP_417514.4" - ], - [ - "gene_synonym", - "GI:90111530" - ], - [ - "gene_synonym", - "yqiC" - ], - [ - "gene_synonym", - "ECK3033" - ], - [ - "gene_synonym", - "JW5505" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46868" - ], - [ - "gene_synonym", - "ASAP:ABE-0009987" - ], - [ - "gene_synonym", - "b3042" - ], - [ - "gene_synonym", - "GeneID:947524" - ] - ], - "dna_sequence": "ATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGACTCTCCCCCCAACGCTGTAA", - "dna_sequence_length": 291, - "functions": [ - "BMFP family putative fusogenic protein" - ], - "id": "CDS_2991", - "location": [ - [ - "NC_000913", - 3184840, - "+", - 291 - ] - ], - "md5": "ec83a0264257cd6cabaa299ec2e7eb59", - "parent_gene": "", - "protein_md5": "aa212907f314017af7197509ecdb308b", - "protein_translation": "MIDPKKIEQIARQVHESMPKGIREFGEDVEKKIRQTLQAQLTRLDLVSREEFDVQTQVLLRTREKLALLEQRISELENRSTEIKKQPDPETLPPTL", - "protein_translation_length": 96, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417515.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009992" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39834" - ], - [ - "gene_synonym", - "GI:16130939" - ], - [ - "gene_synonym", - "JW3011" - ], - [ - "gene_synonym", - "ygiL" - ], - [ - "gene_synonym", - "EcoGene:EG12363" - ], - [ - "gene_synonym", - "ECK3034" - ], - [ - "gene_synonym", - "GeneID:947522" - ], - [ - "gene_synonym", - "b3043" - ] - ], - "dna_sequence": "ATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTATTAAACCAGGTGACGAAGATTTAACTGTAAATCTGGGTGAAGTAGCAGATACCGTACTGAAAAGCGATCAGAAATCTTTGGCTGAACCTTTCACTATTCACCTGCAGGACTGCATGCTGAGTCAGGGTGGAACTACTTATTCAAAAGCGAAGGTTACTTTCACTACAGCAAATACCATGACGGGTCAGTCTGATCTTCTGAAAAATACCAAAGAAACTGAAATCGGCGGCGCCACTGGCGTTGGCGTACGTATTCTGGACAGCCAGAGCGGCGAAGTAACTTTAGGTACTCCGGTAGTAATTACGTTCAACAATACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAA", - "dna_sequence_length": 552, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_2992", - "location": [ - [ - "NC_000913", - 3185414, - "+", - 552 - ] - ], - "md5": "7ad46f3a45d7d6b2c01ce7ea4e4cc0da", - "parent_gene": "", - "protein_md5": "22384031d28e470141f123b8f993dcd1", - "protein_translation": "MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCMLSQGGTTYSKAKVTFTTANTMTGQSDLLKNTKETEIGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMESPSKDATPGNVYAQADYKIAYE", - "protein_translation_length": 183, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010001" - ], - [ - "gene_synonym", - "yqiG" - ], - [ - "gene_synonym", - "GeneID:947529" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76655" - ], - [ - "gene_synonym", - "ECK3035" - ], - [ - "gene_synonym", - "JW5507" - ], - [ - "gene_synonym", - "b3046" - ], - [ - "gene_synonym", - "EcoGene:EG14228" - ] - ], - "dna_sequence": "TTGATTAAAAATATTTATTGTTCATTATCCGTTATCATCATTGGTTGTGCGTCAGCTTATGCCGTTGAATTCAACAAAGATTTAATCGAAGCCGAAGATCGTGAAAACGTTAACCTTTCCCAATTTGAAACTGATGGCCAATTACCCGTCGGCAAATATTCACTAAGCACTCTGATTAATAATAAGAGGACGCCAATCCACCTTGACCTCCAATGGGTATTAATTGATAACCAAACTGCAGTTTGCGTGACACCAGAGCAATTAACATTATTAGGATTTACTGATGAATTTATTGAAAAAACTCAGCAAAACCTGATCGATGGTTGTTACCCTATCGAAAAAGAAAAACAAATTACAACTTATCTCGATAAAGGGAAAATGCAATTATCCATATCTGCACCTCAGGCATGGTTAAAATACAAAGATGCAAACTGGACGCCTCCTGAACTTTGGAATCATGGTATTGCTGGGGCATTTCTTGACTACAATTTATATGCCTCTCATTATGCACCACATCAGGGCGATAATTCGCAAAATATAAGTTCCTATGGGCAGGCTGGGGTTAATCTTGGGGCCTGGCGCCTGCGTACTGATTACCAGTACGATCAGTCATTTAACAATGGCAAAAGCCAGGCGACCAACCTGGATTTTCCGCGTATTTATTTGTTTCGCCCAATCCCAGCAATGAATGCAAAACTAACTATAGGTCAATACGATACTGAATCCTCTATTTTCGACTCTTTCCATTTTTCTGGCATTTCGTTGAAAAGCGATGAGAATATGTTACCGCCAGACCTACGTGGTTACGCACCGCAAATCACGGGTGTCGCACAAACGAATGCAAAGGTCACTGTCTCACAGAACAACCGTATTATTTATCAAGAAAATGTTCCTCCAGGCCCATTTGCTATTACCAATTTATTCAATACATTACAGGGGCAACTTGACGTCAAGGTTGAAGAAGAGGACGGACGCGTTACGCAATGGCAAGTTGCATCTAATAGTATTCCTTATCTGACGCGTAAAGGGCAGATTCGCTACACCACTGCTATGGGTAAACCGACCAGCGTTGGTGGTGATTCCTTACAACAACCCTTCTTCTGGACTGGTGAATTCTCATGGGGTTGGCTGAACAATGTATCCCTGTATGGTGGTTCAGTTTTAACAAACCGTGATTATCAATCTCTGGCTGCCGGCGTTGGTTTTAATCTTAACTCATTAGGTTCATTATCTTTTGATGTCACACGATCTGATGCTCAGTTGCATAATCAGGATAAAGAAACGGGTTATAGCTACCGCGCTAACTATTCAAAACGTTTTGAATCTACCGGTAGCCAGCTCACTTTCGCTGGTTACCGTTTCTCTGATAAAAACTTTGTGACAATGAATGAATATATCAATGACACTAACCATTACACGAATTATCAGAATGAAAAAGAGAGTTATATTGTCACGTTTAACCAGTATCTTGAATCATTAAGGTTAAATACATACGTAAGTTTGGCTCGTAATACTTACTGGGACGCCAGCAGTAATGTGAATTATTCATTATCACTTAGCCGCGATTTTGATATCGGGCCATTAAAAAACGTCTCCACTTCTCTAACATTTAGCCGAATAAACTGGGAAGAAGACAACCAGGATCAACTGTACCTAAATATTTCGATTCCCTGGGGAACTAGTAGAACATTGAGCTATGGTATGCAACGAAATCAGGATAATGAGATTTCGCATACTGCTTCGTGGTATGACTCTTCCGATCGAAATAATTCCTGGAGCGTTTCTGCTTCAGGCGACAATGATGAATTCAAAGATATGAAAGCGTCACTACGCGCCAGTTATCAGCATAATACCGAGAACGGTCGACTCTACCTCTCCGGTACATCACAGCGAGACAGTTATTATTCTCTGAATGCCAGTTGGAATGGTTCATTCACTGCGACTCGCCACGGTGCCGCTTTCCACGACTATAGCGGTAGTGCTGACTCGCGTTTTATGATCGACGCAGACGGCACTGAAGATATTCCGTTGAACAATAAACGCGCGGTAACTAATCGGTATGGCATCGGAGTTATTCCATCAGTCAGCAGTTACATAACAACATCATTAAGTGTTGATACCCGAAATCTGCCAGAAAATGTGGATATCGAAAACTCGGTTATCACCACCACCTTAACCGAGGGTGCTATTGGCTACGCCAAACTTGATACCCGCAAGGGCTACCAAATCATAGGGGTTATTCGCCTGGCAGATGGTAGTCATCCACCACTGGGGATTAGCGTAAAAGATGAAACCAGCCACAAAGAATTAGGACTGGTTGCTGATGGCGGCTTTGTATACCTCAACGGCATTCAGGATGATAACAAACTTGCTTTACGCTGGGGTGACAAATCTTGTTTTATTCAACCACCCAATAGCAGCAACTTAACCACCGGAACGGCTATTTTACCGTGTATTAGCCAAAATTAA", - "dna_sequence_length": 2469, - "id": "CDS_2993", - "location": [ - [ - "NC_000913", - 3186061, - "+", - 30 - ], - [ - "NC_000913", - 3187427, - "+", - 2439 - ] - ], - "md5": "71364628e1a126a2da81d4e026e48dcb", - "parent_gene": "", - "protein_md5": "1deb1d6e718281f41cb32ba52ff1fab3", - "protein_translation": "LIKNIYCSLSVIIIGCASAYAVEFNKDLIEAEDRENVNLSQFETDGQLPVGKYSLSTLINNKRTPIHLDLQWVLIDNQTAVCVTPEQLTLLGFTDEFIEKTQQNLIDGCYPIEKEKQITTYLDKGKMQLSISAPQAWLKYKDANWTPPELWNHGIAGAFLDYNLYASHYAPHQGDNSQNISSYGQAGVNLGAWRLRTDYQYDQSFNNGKSQATNLDFPRIYLFRPIPAMNAKLTIGQYDTESSIFDSFHFSGISLKSDENMLPPDLRGYAPQITGVAQTNAKVTVSQNNRIIYQENVPPGPFAITNLFNTLQGQLDVKVEEEDGRVTQWQVASNSIPYLTRKGQIRYTTAMGKPTSVGGDSLQQPFFWTGEFSWGWLNNVSLYGGSVLTNRDYQSLAAGVGFNLNSLGSLSFDVTRSDAQLHNQDKETGYSYRANYSKRFESTGSQLTFAGYRFSDKNFVTMNEYINDTNHYTNYQNEKESYIVTFNQYLESLRLNTYVSLARNTYWDASSNVNYSLSLSRDFDIGPLKNVSTSLTFSRINWEEDNQDQLYLNISIPWGTSRTLSYGMQRNQDNEISHTASWYDSSDRNNSWSVSASGDNDEFKDMKASLRASYQHNTENGRLYLSGTSQRDSYYSLNASWNGSFTATRHGAAFHDYSGSADSRFMIDADGTEDIPLNNKRAVTNRYGIGVIPSVSSYITTSLSVDTRNLPENVDIENSVITTTLTEGAIGYAKLDTRKGYQIIGVIRLADGSHPPLGISVKDETSHKELGLVADGGFVYLNGIQDDNKLALRWGDKSCFIQPPNSSNLTTGTAILPCISQN", - "protein_translation_length": 822, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "insC1" - ], - [ - "gene_synonym", - "ASAP:ABE-0009997" - ], - [ - "gene_synonym", - "GI:145698309" - ], - [ - "gene_synonym", - "EcoGene:EG40003" - ], - [ - "gene_synonym", - "GeneID:947520" - ], - [ - "gene_synonym", - "b3044" - ], - [ - "gene_synonym", - "ECK0357" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF44" - ], - [ - "gene_synonym", - "NP_417516.3" - ] - ], - "dna_sequence": "ATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAA", - "dna_sequence_length": 366, - "functions": [ - "IS2 repressor TnpA" - ], - "id": "CDS_2994", - "location": [ - [ - "NC_000913", - 3186187, - "+", - 366 - ] - ], - "md5": "9ed51bec276857ffa1620cbb329c920f", - "parent_gene": "", - "protein_md5": "2766fdd4e9e285df2a70f8c10f901f65", - "protein_translation": "MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16130941" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF57" - ], - [ - "gene_synonym", - "ASAP:ABE-0009999" - ], - [ - "gene_synonym", - "EcoGene:EG40004" - ], - [ - "gene_synonym", - "GeneID:947517" - ], - [ - "gene_synonym", - "NP_417517.1" - ], - [ - "gene_synonym", - "ECK0358" - ], - [ - "gene_synonym", - "insD1" - ], - [ - "gene_synonym", - "b3045" - ] - ], - "dna_sequence": "GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG", - "dna_sequence_length": 906, - "functions": [ - "IS2 transposase TnpB" - ], - "id": "CDS_2995", - "location": [ - [ - "NC_000913", - 3186510, - "+", - 906 - ] - ], - "md5": "d7a869f3d04f69c9bbc5e3da4131ca74", - "parent_gene": "", - "protein_md5": "e9d0a5629c6cb4141f55451e6130cec7", - "protein_translation": "MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI", - "protein_translation_length": 301, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010003" - ], - [ - "gene_synonym", - "GI:90111532" - ], - [ - "gene_synonym", - "GeneID:947531" - ], - [ - "gene_synonym", - "b3047" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77616" - ], - [ - "gene_synonym", - "NP_417519.4" - ], - [ - "gene_synonym", - "EcoGene:EG14229" - ], - [ - "gene_synonym", - "ECK3036" - ], - [ - "gene_synonym", - "JW5508" 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"md5": "9a8953a83c9f55570f83050b474c3c4c", - "parent_gene": "", - "protein_md5": "8930e1438de858b670ce6c356df16064", - "protein_translation": "MRYLNTKNIIAAGVLLSCMSSIAWGAIIPDRTRIIMNESDKGEALKLTNQSKNLPYLAQTWIEDTKGNKSRDFIVTVPPMVRLNPSEQIQIRMITQEKIAQLPKDRETLFYFNVREIPPKTDKKNVMQVTMQHALKLFWRPKAIELEDDGVMTYEKVEIIRRNDGSIRFNNKMPYHVTLGYIGTNGVTMLPQTQSLMVTPFSYANTQFKNVPSTFQVGYINDFGGLSFYEINCPVVNNICNISVANRDQ", - "protein_translation_length": 249, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010005" - ], - [ - "gene_synonym", - "GeneID:947535" - ], - [ - "gene_synonym", - "NP_417520.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76656" - ], - [ - "gene_synonym", - "JW5509" - ], - [ - "gene_synonym", - "GI:16130944" - ], - [ - "gene_synonym", - "b3048" - ], - [ - "gene_synonym", - "ECK3037" - ], - [ - "gene_synonym", - "yqiI" - ], - [ - "gene_synonym", - "EcoGene:EG14230" - ] - ], - "dna_sequence": "ATGCGCTACTTGTTAATTGTTATTACTTTTTTTATGGGTTTTAGTTCATTACCTGCATGGGCAATGGACTGCTATGCTGAACATGAAGGTGGAAATACCGTTGTCATTGGTTACGTACCAAGAATCTCTATCCCCAGCGATGGTAAAAAAGGTGATAAAATCTGGCAAAGCAGTGAATATTTTATGAATGTTTTCTGTAATAATGCACTACCAGGCCCATCTCCAGGAGAAGAATACCCATCTGCATGGGCAAATATAATGATGTTGTTAGCATCAGGTCAAGACTTTTATAATCAAAACTCTTATACTTTCGGTGTAACTTATAATGGGGTTGATTATGATTCTACATCTCCACTACCTATTGCAGCACCTGTATGTATTGATATAAAGGGAGCCGGAACCTTCGGGAATGGCTACAAAAAGCCCGCAGTCTGTAGTGGCGGTCCTGAACCGCAATTATCAGTAACTTTTCCAGTACGAGTGCAGCTATATATTAAGCTAGCTAAAAATGCCAATAAAGTAAATAAAAAACTTGTATTACCTGACGAATATATAGCACTTGAATTTAAAGGTATGAGCGGAGCAGGTGCTATAGAAGTAGATAAAAATCTGACCTTCAGGATTCGCGGATTAAATAACATTCATGTCCTTGACTGCTTTGTTAATGTTGATCTGGAACCAGCTGATGGCGTTGTCGACTTTGGTAAAATAAATTCCCGAACAATTAAAAATACCAGCGTGAGTGAGACGTTTAGCGTAGTCATGACCAAAGATCCGGGTGCGGCCTGTACTGAGCAGTTTAATATTTTAGGGAGTTTTTTCACTACGGATATTTTGAGTGATTATAGCCATCTGGATATAGGTAATGGTCTGCTATTGAAGATATTTCATAACGATGGAACAGCAACGGAATTTAACCGCTTCTCACAATTTGCTTCTTTTTCATCGTCTAGTGCGCCTTCGGTCACCGCACCATTCAGGGCAGAACTGAGTGCGAACCCGGCAGAAACGGTTGTTGAGGGACCGTTTAGTAAAGACGTAATCCTGAAAATCACCTATAACTAG", 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"EcoGene:EG11381" - ], - [ - "gene_synonym", - "glgS" - ], - [ - "gene_synonym", - "GI:16130945" - ], - [ - "gene_synonym", - "scoR" - ], - [ - "gene_synonym", - "NP_417521.1" - ], - [ - "gene_synonym", - "ECK3038" - ] - ], - "dna_sequence": "ATGGATCATAGTCTTAATTCTTTAAATAATTTCGATTTCCTGGCGCGTAGTTTTGCCAGAATGCACGCAGAAGGTCGCCCGGTCGATATTCTGGCCGTTACTGGTAACATGGATGAAGAACATAGAACCTGGTTTTGCGCACGTTATGCCTGGTATTGTCAACAGATGATGCAGGCAAGAGAGCTGGAGTTAGAGCACTGA", - "dna_sequence_length": 201, - "functions": [ - "motility and biofilm regulator" - ], - "id": "CDS_2998", - "location": [ - [ - "NC_000913", - 3191939, - "-", - 201 - ] - ], - "md5": "2b556b910c4da380297735e0217c25b1", - "parent_gene": "", - "protein_md5": "28efdce60777854550935d65f4c0e5f5", - "protein_translation": "MDHSLNSLNNFDFLARSFARMHAEGRPVDILAVTGNMDEEHRTWFCARYAWYCQQMMQARELELEH", - "protein_translation_length": 66, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010011" - ], - [ - "gene_synonym", - "JW3022" - ], - [ - "gene_synonym", - "GeneID:947530" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76657" - ], - [ - "gene_synonym", - "GI:16130946" - ], - [ - "gene_synonym", - "NP_417522.1" - ], - [ - "gene_synonym", - "ECK3039" - ], - [ - "gene_synonym", - "yqiJ" - ], - [ - "gene_synonym", - "b3050" - ], - [ - "gene_synonym", - "EcoGene:EG14231" - ] - ], - "dna_sequence": "ATGATTTTATTCGCCGACTATAACACCCCTTATCTTTTCGCTATTTCCTTTGTACTGTTGATCGGCCTGTTAGAAATTTTTGCGCTTATCTGCGGTCACATGCTCTCCGGTGCTCTTGATGCACATCTTGACCATTATGATTCTATAACCACAGGTCATATTAGCCAGGCACTTCATTATCTCAATATTGGAAGATTGCCAGCTCTCGTCGTTCTCTGCTTACTGGCTGGTTTTTTTGGTCTTATTGGCATCCTGTTGCAGCATGCCTGCATCATGGTCTGGCAATCACCACTGTCGAACCTGTTCGTGGTTCCTGTCAGTTTACTGTTTACGATTATTGCGGTGCATTATACCGGTAAAATAGTTGCGCCCTGGATTCCACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATTTACTACTGGAGCCTGAAGAAGGAAAAATTTTCACTAAAGGAGACAAAGTGTTAATTATTTGCCGACTTTCTGCAACGCGATATTTGGCGGAAAATAATCCCTGGCCCCAAATATTGTAA", - "dna_sequence_length": 630, - "functions": [ - "DUF1449 family inner membrane protein" - ], - "id": "CDS_2999", - "location": [ - [ - "NC_000913", - 3192208, - "+", - 630 - ] - ], - "md5": "a594d889d768d3790d1bc2d1f246874d", - "parent_gene": "", - "protein_md5": "0087e1591cf4e7494fadfb8076c46772", - "protein_translation": "MILFADYNTPYLFAISFVLLIGLLEIFALICGHMLSGALDAHLDHYDSITTGHISQALHYLNIGRLPALVVLCLLAGFFGLIGILLQHACIMVWQSPLSNLFVVPVSLLFTIIAVHYTGKIVAPWIPRDHSSAITEEEYIGSMALITGHQATSGNPCEGKLTDQFGQIHYLLLEPEEGKIFTKGDKVLIICRLSATRYLAENNPWPQIL", - "protein_translation_length": 209, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010013" - ], - [ - "gene_synonym", - "NP_417523.1" - ], - [ - "gene_synonym", - "ECK3040" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P77306" - ], - [ - "gene_synonym", - "JW3023" - ], - [ - "gene_synonym", - "GeneID:947537" - ], - [ - "gene_synonym", - "GI:16130947" - ], - [ - "gene_synonym", - "yqiK" - ], - [ - "gene_synonym", - "b3051" - ], - [ - "gene_synonym", - "EcoGene:EG14232" - ] - ], - "dna_sequence": "ATGGATGATATTGTTAATTCTGTGCCCTCCTGGATGTTTACCGCAATTATTGCCGTATGCATTCTGTTTATTATTGGAATTATTTTCGCCAGGCTCTATCGTCGCGCTTCGGCAGAGCAAGCTTTTGTTCGTACTGGTTTAGGTGGGCAAAAAGTGGTAATGAGCGGTGGCGCAATCGTGATGCCGATCTTTCATGAAATAATCCCCATCAATATGAATACTCTGAAGCTGGAAGTCAGCCGCTCAACCATTGATAGCCTGATTACGAAAGATCGTATGCGCGTCGATGTAGTAGTCGCTTTCTTTGTGCGGGTAAAACCTTCAGTAGAAGGGATTGCCACCGCTGCCCAGACGCTGGGGCAACGCACCCTGTCGCCTGAAGACTTACGTATGTTGGTTGAAGATAAATTTGTCGATGCCCTCCGTGCAACAGCTGCGCAAATGACCATGCATGAGTTACAGGATACCCGCGAGAACTTTGTGCAGGGGGTGCAAAATACAGTGGCAGAAGACCTGTCGAAAAACGGTCTGGAACTGGAGAGCGTTTCACTTACCAACTTTAACCAGACCTCGAAAGAACATTTCAATCCGAACAATGCCTTTGACGCCGAAGGTTTAACCAAACTGACTCAGGAAACAGAGCGCCGTCGCCGCGAACGTAACGAAGTTGAACAGGATGTAGAAGTTGCGGTGCGTGAAAAAAATCGCGATGCGCTATCGCGCAAGCTGGAGATTGAACAGCAAGAAGCGTTTATGACGCTTGAGCAGGAGCAGCAGGTTAAAACCCGTACTGCCGAACAGAATGCACGTATTGCGGCTTTTGAAGCTGAACGTCGTCGTGAAGCAGAGCAGACACGAATTCTGGCTGAACGACAGATTCAGGAAACAGAAATCGACCGCGAACAGGCCGTCCGCTCAAGAAAGGTTGAAGCTGAACGTGAAGTTCGCATTAAAGAGATCGAACAGCAGCAGGTCACCGAAATCGCTAACCAGACGAAATCGATCGCTATTGCCGCCAAATCGGAACAACAGTCCCAGGCAGAAGCGCGTGCTAATCTCGCACTTGCAGAAGCGGTAAGCGCCCAACAAAACGTAGAAACCACTCGCCAGACTGCCGAAGCCGATCGTGCTAAACAAGTTGCCCTAATCGCTGCCGCGCAGGATGCAGAAACCAAAGCGGTTGAACTGACCGTGCGGGCGAAAGCAGAAAAAGAAGCCGCAGAGATGCAGGCGGCGGCTATCGTTGAGTTAGCCGAAGCTACACGTAAAAAGGGTCTGGCGGAAGCAGAAGCACAACGTGCGCTGAACGATGCTATCAACGTACTTTCTGATGAACAAACCAGCCTTAAATTCAAACTGGCCTTGTTGCAGGCGCTGCCTGCGGTAATAGAGAAATCCGTTGAGCCGATGAAGTCAATCGACGGTATCAAGATTATTCAGGTCGATGGTCTGAATCGTGGCGGCGCTGCGGGTGATGCAAACACGGGTAATGTGGGGGGCGGAAACCTGGCGGAACAAGCATTATCAGCCGCTCTCTCTTACCGCACACAGGCACCGCTGATTGACTCCTTGCTCAATGAAATTGGCGTTTCAGGCGGCTCACTGGCGGCATTGACTTCACCCTTAACCTCAACAACTCCCGTCGAAGAAAAAGCAGAGTAA", 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"ECK4479" - ], - [ - "gene_synonym", - "GI:226524748" - ], - [ - "gene_synonym", - "ibsD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P616" - ], - [ - "gene_synonym", - "EcoGene:EG14469" - ], - [ - "gene_synonym", - "GeneID:7751628" - ], - [ - "gene_synonym", - "b4664" - ], - [ - "gene_synonym", - "YP_002791256.1" - ] - ], - "dna_sequence": "ATGATGAAGCTCGTCATCATACTGATTGTGTTGTTACTCGTAAGTTTCGCAGCTTATTAA", - "dna_sequence_length": 60, - "functions": [ - "toxic membrane protein" - ], - "id": "CDS_3001", - "location": [ - [ - "NC_000913", - 3194766, - "+", - 60 - ] - ], - "md5": "bac993dd3e275bd0a51559420f863574", - "parent_gene": "", - "protein_md5": "37f29d5dbc728f9f12b58c85d6a433bd", - "protein_translation": "MMKLVIILIVLLLVSFAAY", - "protein_translation_length": 19, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_002791257.1" - ], - [ - "gene_synonym", - "GI:226524749" - ], - [ - "gene_synonym", - "EcoGene:EG14471" - ], - [ - "gene_synonym", - "ibsE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P617" - ], - [ - "gene_synonym", - "b4666" - ], - [ - "gene_synonym", - "GeneID:7751629" - ], - [ - "gene_synonym", - "ECK4481" - ] - ], - "dna_sequence": "ATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCGACTTACTAA", - "dna_sequence_length": 60, - "functions": [ - "toxic membrane protein" - ], - "id": "CDS_3002", - "location": [ - [ - "NC_000913", - 3195141, - "+", - 60 - ] - ], - "md5": "76c01877bd7842a1d6f34f535bc73cc2", - "parent_gene": "", - "protein_md5": "d6fe31d1d290860bc730efff7b068c24", - "protein_translation": "MMKLVIILVVLLLLSFPTY", - "protein_translation_length": 19, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947548" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76658" - ], - [ - "gene_synonym", - "ASAP:ABE-0010015" - ], - [ - "gene_synonym", - "waaE" - ], - [ - "gene_synonym", - "gmhC" - ], - [ - "gene_synonym", - "hldE" - ], - [ - "gene_synonym", - "ECK3042" - ], - [ - "gene_synonym", - "JW3024" - ], - [ - "gene_synonym", - "EcoGene:EG13416" - ], - [ - "gene_synonym", - "rfaE" - ], - [ - "gene_synonym", - "NP_417524.1" - ], - [ - "gene_synonym", - "yqiF" - ], - [ - "gene_synonym", - "GI:16130948" - ], - [ - "gene_synonym", - "b3052" - ] - ], - "dna_sequence": "ATGAAAGTAACGCTGCCAGAGTTTGAACGTGCAGGAGTGATGGTGGTTGGTGATGTGATGCTGGATCGTTACTGGTACGGCCCCACCAGTCGTATCTCGCCGGAAGCGCCGGTGCCCGTGGTTAAAGTGAATACCATCGAAGAACGTCCGGGCGGCGCGGCTAACGTGGCGATGAATATCGCTTCTCTCGGTGCTAATGCACGCCTGGTCGGGTTGACGGGCATTGACGATGCAGCGCGCGCGCTGAGTAAATCTCTGGCCGACGTCAACGTCAAATGCGACTTCGTTTCTGTACCGACGCATCCGACCATTACCAAATTACGGGTACTTTCCCGCAACCAACAGCTGATCCGTCTGGATTTTGAAGAAGGTTTCGAAGGTGTTGATCCGCAGCCGCTGCACGAGCGGATTAATCAGGCGCTGAGTTCGATTGGCGCGCTGGTGCTTTCTGACTACGCCAAAGGTGCGCTGGCAAGCGTACAGCAGATGATCCAACTGGCGCGTAAAGCGGGTGTTCCGGTGCTGATTGATCCAAAAGGTACCGATTTTGAGCGCTACCGCGGCGCTACGCTGTTAACGCCGAATCTCTCGGAATTTGAAGCTGTTGTCGGTAAATGTAAGACCGAAGAAGAGATTGTTGAGCGCGGCATGAAACTGATTGCCGATTACGAACTCTCGGCTCTGTTAGTGACCCGTTCCGAACAGGGTATGTCGCTGCTGCAACCGGGTAAAGCGCCGCTGCATATGCCAACCCAAGCGCAGGAAGTGTATGACGTTACCGGTGCGGGCGACACGGTGATTGGCGTCCTGGCGGCAACGCTGGCAGCGGGTAATTCGCTGGAAGAAGCCTGCTTCTTTGCCAATGCGGCGGCTGGCGTGGTGGTCGGCAAACTGGGAACCTCCACGGTTTCGCCGATCGAGCTGGAAAATGCTGTACGTGGACGTGCAGATACAGGCTTTGGCGTGATGACCGAAGAGGAACTGAAGCTGGCCGTAGCGGCAGCGCGTAAACGTGGTGAAAAAGTGGTGATGACCAACGGTGTCTTTGACATCCTGCACGCCGGGCACGTCTCTTATCTGGCAAATGCCCGCAAGCTGGGTGACCGCTTGATTGTTGCCGTCAACAGCGATGCCTCCACCAAACGGCTGAAAGGGGATTCCCGCCCGGTAAACCCACTCGAACAGCGTATGATTGTGCTGGGCGCACTGGAAGCGGTCGACTGGGTAGTGTCGTTTGAAGAGGACACGCCGCAGCGCTTGATCGCCGGGATCTTGCCAGATCTGCTGGTGAAAGGCGGCGACTATAAACCAGAAGAGATTGCCGGGAGTAAAGAAGTCTGGGCCAACGGTGGCGAAGTGTTGGTGCTCAACTTTGAAGACGGTTGCTCGACGACCAACATCATCAAGAAGATCCAACAGGATAAAAAAGGCTAA", - "dna_sequence_length": 1434, - "functions": [ - "heptose 7-phosphate kinase and heptose 1-phosphate adenyltransferase" - ], - "id": "CDS_3003", - "location": [ - [ - "NC_000913", - 3196753, - "-", - 1434 - ] - ], - "md5": "366bc6b9cc1507fd8fe6b79cb9406f6f", - "parent_gene": "", - "protein_md5": "8c74d913e2fc37c6a6d92d97771b0e31", - "protein_translation": "MKVTLPEFERAGVMVVGDVMLDRYWYGPTSRISPEAPVPVVKVNTIEERPGGAANVAMNIASLGANARLVGLTGIDDAARALSKSLADVNVKCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFEGVDPQPLHERINQALSSIGALVLSDYAKGALASVQQMIQLARKAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVVGKCKTEEEIVERGMKLIADYELSALLVTRSEQGMSLLQPGKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAAGNSLEEACFFANAAAGVVVGKLGTSTVSPIELENAVRGRADTGFGVMTEEELKLAVAAARKRGEKVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGDSRPVNPLEQRMIVLGALEAVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEEIAGSKEVWANGGEVLVLNFEDGCSTTNIIKKIQQDKKG", - "protein_translation_length": 477, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11602" - ], - [ - "gene_synonym", - "ECK3043" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30870" - ], - [ - "gene_synonym", - "JW3025" - ], - [ - "gene_synonym", - "glnE" - ], - [ - "gene_synonym", - "GeneID:947552" - ], - [ - "gene_synonym", - "NP_417525.1" - ], - [ - "gene_synonym", - "GI:16130949" - ], - [ - "gene_synonym", - "ASAP:ABE-0010018" - ], - [ - "gene_synonym", - "b3053" - ] - ], - "dna_sequence": "ATGAAGCCGCTCTCTTCACCGTTACAGCAGTACTGGCAGACCGTTGTTGAGCGGCTGCCAGAGCCTTTAGCCGAGGAATCACTTAGCGCACAGGCGAAGTCAGTACTTACTTTTAGTGATTTTGTGCAGGACAGCGTGATTGCGCATCCAGAGTGGCTGACGGAACTGGAAAGCCAACCGCCGCAGGCCGACGAATGGCAGCATTACGCGGCATGGTTGCAGGAGGCGCTCTGTAATGTGAGTGACGAAGCCGGGTTAATGCGCGAGCTGCGGCTATTCCGGCGGCGCATTATGGTGCGCATCGCCTGGGCGCAAACGCTGGCACTGGTTACTGAAGAGAGCATATTGCAGCAGCTCAGCTATCTGGCGGAGACGCTGATTGTTGCGGCGCGTGACTGGCTGTATGACGCCTGCTGCCGCGAGTGGGGAACGCCGTGCAATGCGCAGGGCGAAGCGCAACCGCTGCTGATTTTAGGCATGGGTAAGCTGGGCGGTGGGGAGCTGAATTTCTCCTCTGATATCGATCTGATTTTTGCCTGGCCGGAACATGGTTGTACGCAGGGTGGACGCCGGGAACTGGATAACGCGCAGTTTTTTACCCGCATGGGGCAGCGGCTGATTAAAGTGCTGGATCAACCAACGCAGGATGGCTTCGTCTATCGCGTGGATATGCGGCTGCGTCCGTTTGGCGAAAGTGGCCCGCTGGTGCTGAGCTTTGCCGCGTTGGAAGATTATTACCAGGAGCAGGGGCGCGACTGGGAGCGTTACGCGATGGTCAAGGCGCGGATTATGGGCGATAGCGAAGGCGTCTATGCTAACGAGTTGCGTGCGATGCTGCGCCCGTTTGTTTTCCGTCGTTACATCGATTTCAGCGTGATTCAGTCGCTGCGCAACATGAAAGGGATGATTGCCCGTGAAGTGCGTCGACGTGGTTTGACCGACAATATCAAACTCGGCGCAGGCGGCATTCGCGAAATTGAATTTATCGTTCAGGTGTTCCAGCTCATTCGCGGCGGACGCGAACCGTCGCTGCAATCGCGCTCTTTACTGCCAACGCTCAGCGCCATTGCCGAGCTGCATCTGCTTTCTGAAAACGATGCTGAACAATTGCGAGTGGCGTATCTGTTCCTGCGGCGTCTGGAAAACCTGCTGCAAAGCATTAACGACGAACAAACCCAGACGCTTCCTTCTGATGAGCTTAATCGTGCGCGGCTGGCGTGGGCGATGGACTTTGCTGACTGGCCGCAACTGACCGGGGCGCTGACCGCACATATGACCAATGTGCGCCGGGTGTTTAATGAATTGATTGGCGACGATGAAAGTGAAACTCAGGAAGAGTCGCTGTCGGAACAGTGGCGTGAGCTGTGGCAGGATGCGTTGCAGGAAGATGACACTACGCCAGTGCTGGCGCATCTTAGCGAGGATGATCGCAAACAGGTGCTAACGCTGATTGCCGATTTCCGCAAAGAGCTGGATAAGCGCACCATCGGGCCGCGAGGACGTCAGGTGCTCGACCATCTGATGCCGCATCTGCTAAGTGATGTCTGTGCGCGTGAAGACGCTGCCGTTACGCTGTCGCGCATTACCGCCTTGCTGGTGGGGATTGTTACCCGCACCACCTATTTAGAATTGCTCAGTGAATTCCCCGCGGCGCTTAAACATTTGATTTCTCTGTGTGCCGCGTCGCCGATGATTGCCAGCCAGCTGGCGCGTTATCCATTATTGCTGGATGAATTGCTCGATCCAAACACCCTTTACCAGCCGACGGCGACCGATGCCTACCGCGATGAGTTGCGCCAGTATTTGCTGCGCGTGCCGGAAGATGACGAAGAGCAACAGCTTGAGGCGCTGCGTCAGTTCAAACAGGCGCAGCTGTTACGCATCGCCGCAGCGGATATCGCCGGTACGCTACCGGTGATGAAAGTGAGCGATCACTTAACCTGGCTGGCGGAAGCCATGATAGATGCCGTCGTTCAGCAGGCGTGGGTTCAAATGGTTGCCCGCTACGGTAAGCCGAATCACCTGAACGAACGCGAAGGGCGTGGTTTTGCGGTGGTCGGCTACGGCAAGCTGGGCGGCTGGGAGTTAGGCTACAGTTCCGATCTTGACCTTATCTTCCTCCATGATTGCCCAATGGATGCGATGACTGACGGTGAGCGGGAAATCGACGGGCGGCAGTTTTATCTGCGTCTGGCGCAACGCATTATGCATCTGTTCAGTACGCGTACCTCTTCCGGCATTTTGTATGAAGTGGATGCTCGACTGCGTCCGTCCGGGGCGGCGGGAATGCTGGTGACATCCGCAGAAGCATTTGCCGATTATCAGAAAAACGAGGCCTGGACGTGGGAACATCAGGCGCTGGTGCGTGCGCGTGTAGTGTACGGCGATCCGCAGCTCACCGCGCACTTTGACGCAGTGCGTCGCGAGATTATGACGCTGCCGCGTGAAGGTAAAACTCTGCAAACGGAAGTGCGGGAAATGCGCGAGAAAATGCGCGCTCATCTCGGCAATAAACATCGCGATCGCTTTGATATCAAAGCTGATGAAGGGGGAATTACCGATATCGAATTTATTACCCAATATCTGGTGTTGCGCTACGCTCATGAAAAACCGAAGTTAACGCGCTGGTCAGACAACGTGCGTATTCTGGAACTACTGGCGCAAAACGACATTATGGAAGAGCAGGAAGCGATGGCGCTGACCCGTGCTTACACTACGCTTCGCGATGAACTTCATCATCTGGCATTACAGGAATTGCCGGGCCATGTGTCGGAGGATTGCTTCACCGCAGAGCGTGAACTGGTGCGGGCAAGCTGGCAGAAGTGGCTGGTGGAAGAATGA", 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"MKPLSSPLQQYWQTVVERLPEPLAEESLSAQAKSVLTFSDFVQDSVIAHPEWLTELESQPPQADEWQHYAAWLQEALCNVSDEAGLMRELRLFRRRIMVRIAWAQTLALVTEESILQQLSYLAETLIVAARDWLYDACCREWGTPCNAQGEAQPLLILGMGKLGGGELNFSSDIDLIFAWPEHGCTQGGRRELDNAQFFTRMGQRLIKVLDQPTQDGFVYRVDMRLRPFGESGPLVLSFAALEDYYQEQGRDWERYAMVKARIMGDSEGVYANELRAMLRPFVFRRYIDFSVIQSLRNMKGMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQLIRGGREPSLQSRSLLPTLSAIAELHLLSENDAEQLRVAYLFLRRLENLLQSINDEQTQTLPSDELNRARLAWAMDFADWPQLTGALTAHMTNVRRVFNELIGDDESETQEESLSEQWRELWQDALQEDDTTPVLAHLSEDDRKQVLTLIADFRKELDKRTIGPRGRQVLDHLMPHLLSDVCAREDAAVTLSRITALLVGIVTRTTYLELLSEFPAALKHLISLCAASPMIASQLARYPLLLDELLDPNTLYQPTATDAYRDELRQYLLRVPEDDEEQQLEALRQFKQAQLLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQMVARYGKPNHLNEREGRGFAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGEREIDGRQFYLRLAQRIMHLFSTRTSSGILYEVDARLRPSGAAGMLVTSAEAFADYQKNEAWTWEHQALVRARVVYGDPQLTAHFDAVRREIMTLPREGKTLQTEVREMREKMRAHLGNKHRDRFDIKADEGGITDIEFITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHLALQELPGHVSEDCFTAERELVRASWQKWLVEE", - "protein_translation_length": 946, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417526.1" - ], - [ - "gene_synonym", - "ygiF" - ], - [ - "gene_synonym", - "EcoGene:EG11603" - ], - [ - "gene_synonym", - "ECK3044" - ], - [ - "gene_synonym", - "JW3026" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30871" - ], - [ - "gene_synonym", - "GI:16130950" - ], - [ - "gene_synonym", - "b3054" - ], - [ - "gene_synonym", - "GeneID:947554" - ], - [ - "gene_synonym", - "ASAP:ABE-0010020" - ] - ], - "dna_sequence": "ATGGCTCAGGAAATCGAATTAAAGTTTATTGTTAATCACAGTGCCGTTGAGGCGTTGCGTGACCATCTCAATACGCTGGGCGGCGAGCACCATGACCCCGTGCAGTTGCTGAATATTTACTACGAAACGCCGGATAACTGGCTGCGTGGGCACGATATGGGCTTACGTATTCGTGGCGAAAACGGTCGCTATGAGATGACCATGAAAGTTGCAGGAAGAGTGACAGGCGGCTTACATCAGCGCCCGGAATATAACGTGGCGTTGAGCGAACCGACGCTCGACCTGGCGCAGTTACCGACGGAAGTCTGGCCGAACGGCGAATTGCCCGCCGATCTCGCCTCCCGCGTGCAGCCGCTGTTCAGCACCGATTTTTATCGCGAAAAATGGCTGGTGGCGGTCGATGGTAGCCAAATTGAAATCGCCCTCGACCAGGGGGAAGTGAAAGCGGGTGAATTTGCTGAACCTATCTGTGAGCTGGAACTGGAACTGCTTAGCGGCGACACGCGCGCGGTGCTGAAACTGGCGAACCAACTGGTATCGCAAACCGGATTACGCCAGGGCAGCCTGAGCAAAGCGGCGCGTGGCTATCATCTGGCGCAGGGCAATCCGGCGCGTGAAATCAAACCGACCACCATTTTGCATGTTGCGGCAAAAGCCGATGTGGAACAGGGGCTGGAAGCGGCGCTCGAGCTGGCGTTAGCGCAATGGCAGTATCATGAAGAACTGTGGGTACGCGGCAACGATGCGGCGAAAGAACAGGTGCTGGCAGCCATTAGCCTGGTCCGTCATACGCTGATGCTGTTCGGTGGTATTGTGCCGCGTAAAGCGAGCACTCACTTACGTGATCTGCTGACTCAATGCGAGGCGACCATTGCTTCTGCGGTGTCTGCCGTGACGGCGGTCTACTCTACCGAAACGGCAATGGCGAAGCTGGCGTTGACCGAATGGTTGGTAAGCAAAGCATGGCAGCCATTTTTAGATGCCAAAGCGCAGGGCAAAATCAGCGACTCCTTCAAACGCTTTGCCGATATCCATCTTTCCCGCCATGCCGCTGAACTGAAAAGCGTTTTCTGCCAGCCGTTAGGCGATCGCTACCGTGACCAGTTGCCACGCCTGACGCGTGATATTGACTCAATACTGTTGCTGGCGGGTTACTATGATCCTGTCGTCGCGCAAGCCTGGCTGGAGAACTGGCAGGGGCTGCATCACGCTATTGCGACCGGGCAACGCATCGAAATTGAACATTTCCGTAATGAGGCAAACAATCAGGAACCGTTCTGGTTGCACAGCGGAAAACGTTAA", - "dna_sequence_length": 1302, - "functions": [ - "inorganic triphosphatase" - ], - "id": "CDS_3005", - "location": [ - [ - "NC_000913", - 3200965, - "-", - 1302 - ] - ], - "md5": "ddbc51b400e3dea4a493b8d3c83a2981", - "parent_gene": "", - "protein_md5": "9ee5e8cd4a58fd0545db42b085d37a2e", - "protein_translation": "MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEVWPNGELPADLASRVQPLFSTDFYREKWLVAVDGSQIEIALDQGEVKAGEFAEPICELELELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAALELALAQWQYHEELWVRGNDAAKEQVLAAISLVRHTLMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVTAVYSTETAMAKLALTEWLVSKAWQPFLDAKAQGKISDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQAWLENWQGLHHAIATGQRIEIEHFRNEANNQEPFWLHSGKR", - "protein_translation_length": 433, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "htrG" - ], - [ - "gene_synonym", - "EcoGene:EG12434" - ], - [ - "gene_synonym", - "ecfG" - ], - [ - "gene_synonym", - "NP_417527.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010028" - ], - [ - "gene_synonym", - "ECK3045" - ], - [ - "gene_synonym", - "ygiM" - ], - [ - "gene_synonym", - "JW3027" - ], - [ - "gene_synonym", - "GI:16130951" - ], - [ - "gene_synonym", - "b3055" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADT8" - ], - [ - "gene_synonym", - "GeneID:947555" - ] - ], - "dna_sequence": "ATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAGCCTGCGCTCCCGTGTGCCAGATCTGGAAAATCAGGTCAAAACCCTGACCGATAAACTCACCAATATCGATAACACCTGGAATCAGCGCACCGCAGAAATGCAGCAAAAAGTGGCGCAGAGCGACAGCGTGATCAACGGGTTAAAAGAAGAAAATCAGAAACTGAAAAACGAGCTGATTGTCGCGCAGAAAAAGGTCGATGCCGCCAGCGTACAGCTGGATGACAAACAGCGCACCATCATCATGCAATGGTTTATGTATGGCGGTGGCGTGCTGGGGCTTGGCTTGCTGCTCGGTCTGGTACTGCCGCACCTGATCCCAAGCCGCAAACGCAAAGATCGCTGGATGAACTAA", - "dna_sequence_length": 621, - "functions": [ - "SH3 domain protein" - ], - "id": "CDS_3006", - "location": [ - [ - "NC_000913", - 3201207, - "+", - 621 - ] - ], - "md5": "713cb3fc228364fa75e4e19baf9779f6", - "parent_gene": "", - "protein_md5": "588547ef3c4d62c7c322e82d0e2fdbbf", - "protein_translation": "MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHYRLVGTVNAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQVKTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASVQLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLIPSRKRKDRWMN", - "protein_translation_length": 206, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3028" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06961" - ], - [ - "gene_synonym", - "NP_417528.1" - ], - [ - "gene_synonym", - "GeneID:947553" - ], - [ - "gene_synonym", - "EcoGene:EG10136" - ], - [ - "gene_synonym", - "ECK3046" - ], - [ - "gene_synonym", - "GI:16130952" - ], - [ - "gene_synonym", - "b3056" - ], - [ - "gene_synonym", - "cca" - ], - [ - "gene_synonym", - "ASAP:ABE-0010031" - ] - ], - "dna_sequence": "GTGAAGATTTATCTGGTCGGTGGTGCTGTTCGGGATGCATTGTTAGGGCTACCGGTCAAAGACAGAGATTGGGTGGTGGTCGGCAGTACGCCACAGGAGATGCTCGACGCGGGCTACCAGCAGGTAGGCCGCGATTTTCCTGTGTTTCTGCATCCGCAAACGCATGAAGAGTATGCGCTGGCACGTACCGAACGGAAATCCGGTTCCGGTTACACCGGTTTTACTTGCTATGCCGCACCGGATGTCACGCTGGAAGATGATCTTAAGCGTCGCGATCTGACCATTAATGCGCTGGCCCAGGACGATAACGGCGAGATTATCGACCCGTACAACGGTCTGGGCGATCTGCAAAATCGTCTGTTGCGCCATGTTTCCCCCGCTTTTGGCGAAGATCCGTTACGCGTATTGCGCGTGGCGCGTTTTGCTGCGCGTTATGCCCACCTCGGTTTTCGTATTGCCGATGAAACTCTGGCGTTGATGCGCGAGATGACCCATGCGGGTGAACTGGAACACCTGACGCCTGAACGGGTATGGAAAGAGACGGAAAGCGCCCTCACCACCCGCAATCCACAGGTGTTCTTCCAGGTACTGCGCGATTGCGGCGCACTGCGCGTTTTATTCCCGGAAATTGACGCACTGTTTGGCGTTCCGGCCCCTGCCAAGTGGCATCCGGAAATCGATACGGGTATTCATACCTTAATGACGCTCTCAATGGCGGCGATGCTGAGTCCGCAGGTCGATGTCCGTTTCGCAACTTTATGCCACGATCTCGGTAAAGGGCTGACGCCGCCAGAACTCTGGCCGCGTCATCATGGTCATGGCCCGGCGGGTGTTAAGTTAGTGGAACAACTATGCCAGCGTCTGCGCGTGCCAAATGAAATTCGCGATTTAGCCAGACTGGTGGCTGAGTTTCACGATCTCATCCACACCTTCCCAATGCTGAACCCAAAAACCATCGTCAAATTATTTGATTCCATCGATGCCTGGCGTAAACCGCAGCGTGTCGAGCAACTGGCGCTGACCAGCGAGGCTGACGTGCGCGGCAGAACCGGTTTTGAATCAGCGGACTACCCGCAAGGCCGCTGGTTGCGCGAAGCCTGGGAAGTGGCGCAGTCAGTGCCGACAAAAGCCGTCGTTGAAGCGGGATTTAAAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGA", - "dna_sequence_length": 1239, - "functions": [ - "fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase" - ], - "id": "CDS_3007", - "location": [ - [ - "NC_000913", - 3201891, - "+", - 1239 - ] - ], - "md5": "e267eb85f017b9251d2a3bcfaf7d9f36", - "parent_gene": "", - "protein_md5": "4fa5e6dafafe9590ccd7798a2393337e", - "protein_translation": "MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPKPE", - "protein_translation_length": 412, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3029" - ], - [ - "gene_synonym", - "uppP" - ], - [ - "gene_synonym", - "bacA" - ], - [ - "gene_synonym", - "ECK3047" - ], - [ - "gene_synonym", - "NP_417529.1" - ], - [ - "gene_synonym", - "EcoGene:EG11665" - ], - [ - "gene_synonym", - "GI:16130953" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60932" - ], - [ - "gene_synonym", - "ASAP:ABE-0010034" - ], - [ - "gene_synonym", - "b3057" - ], - [ - "gene_synonym", - "GeneID:947551" - ] - ], - "dna_sequence": "ATGAGCGATATGCACTCGCTGCTGATAGCGGCAATATTGGGTGTGGTCGAAGGATTGACAGAATTTCTGCCGGTATCCAGCACGGGCCATATGATTATTGTCGGTCACTTGTTGGGGTTTGAGGGCGACACGGCGAAAACCTTTGAAGTTGTGATCCAGTTAGGATCAATTCTGGCGGTAGTAGTGATGTTCTGGCGGCGTCTGTTTGGCCTGATTGGCATCCACTTTGGCCGCCCGTTGCAGCACGAAGGTGAAAGCAAAGGTCGTTTAACGCTGATCCACATTTTGCTGGGGATGATTCCGGCGGTGGTATTGGGGCTGTTGTTCCACGACACGATTAAGTCATTGTTTAACCCGATAAATGTGATGTATGCGCTGGTCGTTGGCGGTTTGTTGCTGATTGCCGCCGAATGCCTGAAGCCGAAAGAGCCGCGTGCGCCGGGTCTTGATGATATGACCTATCGTCAGGCATTTATGATTGGCTGTTTCCAGTGTCTGGCGCTGTGGCCGGGTTTCTCCCGTTCCGGGGCGACCATTTCAGGTGGGATGCTGATGGGGGTGAGCCGTTACGCTGCTTCCGAGTTTTCGTTCCTGCTGGCGGTGCCGATGATGATGGGCGCAACGGCGCTCGATCTCTACAAAAGCTGGGGCTTCCTGACAAGCGGCGATATCCCGATGTTTGCCGTTGGGTTTATCACCGCTTTTGTGGTGGCGCTGATAGCGATTAAAACCTTCCTGCAATTGATTAAGCGCATTTCGTTTATCCCGTTCGCCATTTATCGCTTTATTGTGGCGGCTGCGGTGTATGTCGTGTTCTTTTAA", - "dna_sequence_length": 822, - "functions": [ - "undecaprenyl pyrophosphate phosphatase" - ], - "id": "CDS_3008", - "location": [ - [ - "NC_000913", - 3204131, - "-", - 822 - ] - ], - "md5": "cb6e2de58b869a3fafa584362ef63b17", - "parent_gene": "", - "protein_md5": "dd97227bd7ad36ee520e9c6be1a2ffcf", - "protein_translation": "MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDTAKTFEVVIQLGSILAVVVMFWRRLFGLIGIHFGRPLQHEGESKGRLTLIHILLGMIPAVVLGLLFHDTIKSLFNPINVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMIGCFQCLALWPGFSRSGATISGGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSWGFLTSGDIPMFAVGFITAFVVALIAIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF", - "protein_translation_length": 273, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC16" - ], - [ - "gene_synonym", - "ECK3048" - ], - [ - "gene_synonym", - "NP_417530.2" - ], - [ - "gene_synonym", - "ygiG" - ], - [ - "gene_synonym", - "EcoGene:EG11673" - ], - [ - "gene_synonym", - "GI:90111533" - ], - [ - "gene_synonym", - "folB" - ], - [ - "gene_synonym", - "b3058" - ], - [ - "gene_synonym", - "JW3030" - ], - [ - "gene_synonym", - "ASAP:ABE-0010036" - ], - [ - "gene_synonym", - "GeneID:947544" - ] - ], - "dna_sequence": "ATGGATATTGTATTTATAGAGCAACTTTCGGTAATCACCACTATTGGTGTTTACGACTGGGAACAGACCATCGAACAGAAGTTAGTGTTCGATATCGAAATGGCGTGGGATAACCGTAAAGCGGCGAAAAGTGATGATGTGGCGGATTGCCTCAGTTACGCTGACATTGCAGAAACGGTGGTCAGCCACGTCGAGGGGGCGCGTTTTGCGCTGGTGGAACGCGTGGCTGAAGAGGTGGCGGAGCTGCTGTTAGCACGCTTCAACTCGCCGTGGGTGCGTATCAAACTCAGCAAGCCAGGCGCAGTGGCGCGGGCGGCGAATGTTGGCGTAATCATTGAGCGTGGCAATAATCTGAAAGAAAATAATTAA", - "dna_sequence_length": 369, - "functions": [ - "dihydroneopterin aldolase and dihydroneopterin triphosphate 2'-epimerase" - ], - "id": "CDS_3009", - "location": [ - [ - "NC_000913", - 3204589, - "-", - 369 - ] - ], - "md5": "22c24b1636da58eda324075ad2540700", - "parent_gene": "", - "protein_md5": "e933f38c54e844615df09466b8372c27", - "protein_translation": "MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKSDDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAVARAANVGVIIERGNNLKENN", - "protein_translation_length": 122, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3049" - ], - [ - "gene_synonym", - "GeneID:947561" - ], - [ - "gene_synonym", - "NP_417531.1" - ], - [ - "gene_synonym", - "plsY" - ], - [ - "gene_synonym", - "ygiH" - ], - [ - "gene_synonym", - "EcoGene:EG11674" - ], - [ - "gene_synonym", - "GI:16130955" - ], - [ - "gene_synonym", - "b3059" - ], - [ - "gene_synonym", - "JW3031" - ], - [ - "gene_synonym", - "ASAP:ABE-0010042" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60782" - ] - ], - "dna_sequence": "ATGAGTGCAATCGCGCCTGGAATGATCCTCATCGCGTACCTCTGCGGCTCCATTTCCAGTGCCATTCTGGTTTGCCGCTTGTGTGGGCTGCCCGATCCGCGAACCAGCGGCTCCGGCAATCCAGGCGCAACCAATGTGTTACGTATCGGTGGCAAGGGAGCAGCCGTAGCAGTACTGATTTTCGACGTTCTGAAAGGAATGTTGCCCGTCTGGGGCGCGTATGAATTAGGTGTCAGCCCCTTCTGGCTAGGCTTAATTGCCATCGCCGCCTGTCTTGGACACATCTGGCCCGTTTTCTTCGGATTTAAAGGAGGAAAAGGCGTTGCTACCGCTTTTGGTGCCATCGCACCCATTGGCTGGGATCTCACCGGAGTAATGGCGGGAACCTGGTTACTGACCGTGCTATTGAGCGGATACTCGTCGCTGGGAGCGATTGTCAGTGCACTGATTGCTCCGTTTTATGTCTGGTGGTTTAAGCCACAATTCACCTTCCCGGTTTCGATGCTCTCTTGCCTGATCCTGCTGCGTCATCATGACAACATCCAACGTCTGTGGCGTCGTCAGGAGACAAAAATCTGGACGAAATTCAAAAGAAAGCGCGAAAAGGATCCCGAGTGA", - "dna_sequence_length": 618, - "functions": [ - "putative glycerol-3-phosphate acyltransferase" - ], - "id": "CDS_3010", - "location": [ - [ - "NC_000913", - 3204694, - "+", - 618 - ] - ], - "md5": "4a2cae528058f4a71ee0af4459e1556c", - "parent_gene": "", - "protein_md5": "6eef03657d134c52e9725ddeea8523f6", - "protein_translation": "MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGATNVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGFKGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE", - "protein_translation_length": 205, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947562" - ], - [ - "gene_synonym", - "ttdR" - ], - [ - "gene_synonym", - "EcoGene:EG12694" - ], - [ - "gene_synonym", - "b3060" - ], - [ - "gene_synonym", - "dan" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45463" - ], - [ - "gene_synonym", - "GI:16130956" - ], - [ - "gene_synonym", - "NP_417532.1" - ], - [ - "gene_synonym", - "ygiP" - ], - [ - "gene_synonym", - "JW3032" - ], - [ - "gene_synonym", - "ECK3050" - ], - [ - "gene_synonym", - "ASAP:ABE-0010045" - ] - ], - "dna_sequence": "ATGCTGAATAGCTGGCCTTTAGCCAAAGACTTGCAGGTACTGGTAGAAATCGTTCACAGCGGGAGTTTTAGCGCCGCAGCGGCGACGCTTGGGCAGACGCCTGCATTTGTCACCAAGCGGATCCAAATCCTTGAAAATACGCTGGCAACAACGCTGCTGAACCGCTCCGCTCGCGGCGTGGCGCTGACTGAAAGTGGCCAACGTTGTTACGAACATGCGTTGGAAATCCTCACCCAATATCAGCGACTGGTCGATGACGTCACGCAAATCAAAACGCGCCCGGAGGGGATGATTCGTATTGGTTGCAGTTTTGGTTTTGGGCGCAGCCATATTGCGCCAGCTATTACCGAACTGATGCGCAATTATCCTGAGTTACAGGTGCATTTTGAATTGTTCGATCGGCAAATTGATTTAGTGCAGGATAATATTGATCTGGATATTCGTATTAATGACGAAATTCCTGATTATTATATTGCGCATCTTTTGACAAAAAATAAAAGAATATTATGCGCAGCACCTGAGTATCTGCAAAAATATCCGCAGCCACAATCCCTACAGGAATTAAGTCGTCATGACTGTCTGGTGACCAAAGAGCGCGATATGACCCATGGAATATGGGAGTTGGGGAACGGTCAGGAGAAAAAATCGGTGAAGGTAAGCGGGCATCTTTCCTCCAATAGCGGCGAGATTGTGCTGCAATGGGCGCTGGAGGGCAAAGGGATTATGCTGCGTTCCGAGTGGGATGTGTTGCCGTTTCTGGAGAGTGGCAAACTGGTGCAAGTATTGCCAGAGTATGCACAAAGCGCCAATATCTGGGCTGTTTACCGGGAGCCGCTCTATCGCAGCATGAAATTACGTGTCTGCGTGGAATTTCTGGCGGCATGGTGCCAGCAACGGCTGGGCAAGCCCGATGAAGGCTATCAGGTCATGTAG", - "dna_sequence_length": 933, - "functions": [ - "transcriptional activator of ttdABT" - ], - "id": "CDS_3011", - "location": [ - [ - "NC_000913", - 3206256, - "-", - 933 - ] - ], - "md5": "f22bb33d1d28eddb51c92d08da3142cd", - "parent_gene": "", - "protein_md5": "aee953e190201272e2f2d1894dd83040", - "protein_translation": "MLNSWPLAKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQILENTLATTLLNRSARGVALTESGQRCYEHALEILTQYQRLVDDVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMRNYPELQVHFELFDRQIDLVQDNIDLDIRINDEIPDYYIAHLLTKNKRILCAAPEYLQKYPQPQSLQELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKGIMLRSEWDVLPFLESGKLVQVLPEYAQSANIWAVYREPLYRSMKLRVCVEFLAAWCQQRLGKPDEGYQVM", - "protein_translation_length": 310, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3061" - ], - [ - "gene_synonym", - "GI:16130957" - ], - [ - "gene_synonym", - "GeneID:947565" - ], - [ - "gene_synonym", - "ygjA" - ], - [ - "gene_synonym", - "ttdA" - ], - [ - "gene_synonym", - "JW3033" - ], - [ - "gene_synonym", - "NP_417533.1" - ], - [ - "gene_synonym", - "ECK3051" - ], - [ - "gene_synonym", - "EcoGene:EG11168" - ], - [ - "gene_synonym", - "ASAP:ABE-0010050" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05847" - ] - ], - "dna_sequence": "ATGATGAGCGAAAGTAATAAGCAACAGGCAGTGAATAAGTTGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGACCTGAATCGTCCTGCCTGTCAGGACACCGGGGAGATTATGTTCTTCGTTAAAGTCGGTTCCCGCTTCCCACTGCTTGGCGAGCTGCAAAGCATACTCAAACAAGCCGTGGAAGAGGCAACCGTCAAAGCGCCACTACGTCACAATGCGGTAGAAATTTTTGACGAAGTAAACACCGGCAAAAATACCGGTAGCGGCGTACCGTGGGTCACCTGGGACATCATCCCCGACAATGACGATGCGGAAATCGAAGTTTACATGGCAGGCGGCGGCTGCACGCTACCTGGCCGCTCGAAAGTGTTAATGCCGTCAGAAGGCTACGAAGGCGTGGTGAAATTCGTCTTCGAAAATATCTCCACCCTCGCCGTAAACGCCTGTCCACCGGTACTGGTGGGCGTGGGCATCGCCACCTCGGTGGAAACCGCCGCCGTACTCTCGCGTAAAGCCATTTTGCGCCCGATTGGCAGCCGCCATCCCAATCCAAAAGCGGCAGAACTGGAGCTACGCCTGGAAGAAGGACTCAACCGTCTGGGGATTGGTCCACAAGGGCTGACCGGCAACAGTTCAGTGATGGGCGTACATATCGAATCTGCCGCCCGCCATCCGTCAACCATCGGCGTTGCTGTCTCTACCGGCTGCTGGGCGCATCGTCGCGGCACGCTGCTGGTTCATGCCGATCTCACCTTTGAAAATCTGTCTCACACCCGGAGCGCGTTATGA", - "dna_sequence_length": 912, - "functions": [ - "L-tartrate dehydratase, alpha subunit" - ], - "id": "CDS_3012", - "location": [ - [ - "NC_000913", - 3206463, - "+", - 912 - ] - ], - "md5": "d70741558c2121847210a929ed2186c3", - "parent_gene": "", - "protein_md5": "be58a2688c8a38b639f154fb0e8f8dc5", - "protein_translation": "MMSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAETSSMGKIIYHTMFDNMQKAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVEEATVKAPLRHNAVEIFDEVNTGKNTGSGVPWVTWDIIPDNDDAEIEVYMAGGGCTLPGRSKVLMPSEGYEGVVKFVFENISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPIGSRHPNPKAAELELRLEEGLNRLGIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTGCWAHRRGTLLVHADLTFENLSHTRSAL", - "protein_translation_length": 303, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417534.1" - ], - [ - "gene_synonym", - "b3062" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC35" - ], - [ - "gene_synonym", - "GeneID:947568" - ], - [ - "gene_synonym", - "ygjB" - ], - [ - "gene_synonym", - "ttdB" - ], - [ - "gene_synonym", - "JW3034" - ], - [ - "gene_synonym", - "ECK3052" - ], - [ - "gene_synonym", - "EcoGene:EG11169" - ], - [ - "gene_synonym", - "ASAP:ABE-0010052" - ], - [ - "gene_synonym", - "GI:16130958" - ] - ], - "dna_sequence": "ATGAAAAAGATCCTGACAACCCCGATCAAAGCTGAAGATCTGCAAGATATTCGCGTCGGCGATGTGATCTACCTGACCGGTACGCTGGTGACCTGCCGCGACGTTTGTCACCGCCGTTTGATCGAACTGAAACGTCCGATCCCTTACGATCTCAACGGCAAAGCGATTTTCCACGCTGGCCCCATCGTGCGCAAAAACGGCGACAAATGGGAGATGGTCTCCGTCGGCCCGACAACCAGTATGCGTATGGAAAGTTTTGAACGTGAATTTATTGAGCAGACCGGCGTGAAACTGGTGGTTGGCAAAGGTGGTATGGGGCCGCTGACCGAAGAAGGCTGCCAGAAATTCAAGGCGCTACATGTGATTTTCCCGGCAGGCTGCGCGGTGCTGGCGGCAACCCAGGTGGAAGAGATTGAAGAAGTGCACTGGACAGAGCTCGGAATGCCGGAGTCACTGTGGGTCTGCCGGGTCAAAGAGTTCGGCCCGCTGATTGTCTCTATTGATACCCACGGCAACAACCTGATAGCCGAAAACAAAAAGCTGTTCGCCGAACGCCGCGATCCCATCGTGGAAGAGATCTGCGAGCACGTCCATTACATCAAATAA", - "dna_sequence_length": 606, - "functions": [ - "L-tartrate dehydratase, beta subunit" - ], - "id": "CDS_3013", - "location": [ - [ - "NC_000913", - 3207371, - "+", - 606 - ] - ], - "md5": "6cac1026a8c6bfe79774665546ae2ef1", - "parent_gene": "", - "protein_md5": "b9f58c8e73f48c10bddd1dac4690d710", - "protein_translation": "MKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELKRPIPYDLNGKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKLVVGKGGMGPLTEEGCQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRVKEFGPLIVSIDTHGNNLIAENKKLFAERRDPIVEEICEHVHYIK", - "protein_translation_length": 201, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ttdT" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39414" - ], - [ - "gene_synonym", - "b3063" - ], - [ - "gene_synonym", - "ygjE" - ], - [ - "gene_synonym", - "ygjC" - ], - [ - "gene_synonym", - "ASAP:ABE-0010056" - ], - [ - "gene_synonym", - "JW3035" - ], - [ - "gene_synonym", - "ECK3053" - ], - [ - "gene_synonym", - "NP_417535.1" - ], - [ - "gene_synonym", - "GeneID:947576" - ], - [ - "gene_synonym", - "EcoGene:EG12393" - ], - [ - "gene_synonym", - "GI:16130959" - ] - ], - "dna_sequence": "ATGAAACCTTCCACTGAATGGTGGCGATATCTTGCGCCGCTGGCGGTCATCGCCATTATTGCTCTACTTCCGGTTCCCGCAGGGCTGGAGAACCATACCTGGCTCTACTTTGCCGTTTTTACTGGCGTGATCGTTGGACTGATCCTCGAACCCGTGCCGGGTGCCGTGGTGGCGATGGTGGGTATATCCATCATCGCCATACTCTCTCCCTGGCTGCTGTTCAGCCCGGAGCAGCTCGCTCAGCCAGGCTTTAAATTCACTGCAAAATCCCTCTCGTGGGCCGTTTCCGGTTTTTCTAATTCGGTTATCTGGCTGATTTTCGCCGCCTTTATGTTTGGCACAGGCTATGAAAAAACCGGGCTTGGACGCCGCATTGCGCTGATTCTGGTGAAAAAGATGGGACATCGCACGCTGTTTCTCGGCTATGCGGTGATGTTCTCCGAGCTGATCCTCGCACCTGTAACACCGTCCAACTCGGCGCGTGGTGCGGGGATTATCTATCCCATCATCCGTAACCTGCCACCGCTCTATCAATCACAACCAAACGACAGCAGTTCGCGCAGCATTGGCTCGTACATCATGTGGATGGGGATTGTTGCCGACTGCGTGACCAGCGCCATTTTCTTGACGGCGATGGCACCAAACTTGCTGTTAATTGGACTGATGAAAAGCGCATCTCACGCCACGCTGAGTTGGGGCGACTGGTTCCTCGGGATGTTGCCGCTCAGCATTTTACTGGTTCTGCTGGTTCCCTGGCTGGCTTACGTGCTGTACCCGCCGGTACTGAAGTCTGGCGATCAGGTGCCGCGCTGGGCAGAGACGGAACTGCAGGCAATGGGCCCGCTCTGTTCGCGTGAAAAACGGATGCTGGGGCTGATGGTAGGCGCGCTGGTGCTGTGGATTTTCGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAATAAAGCGGCGTGGAACGTTTTCTTCTGGCTGGCCTCGCTTATCACCCTCGCCACCGGACTCAACAACACCGGTTTTATTAGCTGGTTTGGCAAACTGTTAGCAGGCAGCTTAAGCGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCCACGGCGTATACCTCCGCTCTCGCACCGATGATGATTGCTGCTGCGCTGGCGATGCCGGAAATCCCGCTGCCGGTGTTCTGCCTGATGGTTGGTGCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAA", 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- [ - "gene_synonym", - "GeneID:947578" - ], - [ - "gene_synonym", - "ygjD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05852" - ], - [ - "gene_synonym", - "gcp" - ], - [ - "gene_synonym", - "ECK3054" - ], - [ - "gene_synonym", - "EcoGene:EG11171" - ], - [ - "gene_synonym", - "NP_417536.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010058" - ], - [ - "gene_synonym", - "GI:16130960" - ] - ], - "dna_sequence": "ATGCGTGTACTGGGTATTGAAACTTCCTGCGATGAAACCGGCATCGCCATTTACGACGATGAAAAAGGTTTGTTAGCCAACCAATTGTATAGTCAGGTGAAATTGCACGCTGACTACGGCGGCGTCGTGCCTGAACTGGCCTCCCGCGATCATGTGCGTAAAACCGTACCGTTGATCCAGGCGGCGCTAAAGGAGTCTGGTTTAACGGCAAAAGACATTGATGCTGTGGCCTATACCGCAGGCCCTGGATTAGTCGGCGCGCTACTGGTTGGCGCGACCGTGGGGCGTTCTCTGGCGTTTGCCTGGGACGTTCCGGCGATCCCTGTACACCATATGGAAGGGCATCTGTTAGCGCCGATGCTGGAAGATAACCCGCCGGAATTTCCGTTTGTTGCGCTGCTTGTTTCCGGCGGTCATACGCAGTTAATCAGCGTGACTGGCATTGGTCAGTACGAGCTGCTCGGCGAGTCTATCGATGATGCCGCCGGGGAAGCGTTTGATAAAACCGCGAAGCTGCTGGGGCTGGATTATCCTGGCGGGCCGTTACTGTCGAAAATGGCGGCTCAGGGTACTGCCGGGCGCTTTGTCTTCCCGCGTCCGATGACCGACCGTCCGGGGCTGGATTTCAGCTTCTCCGGCCTGAAAACCTTCGCGGCAAATACCATTCGTGACAACGGCACCGACGACCAGACGCGTGCTGATATCGCCCGCGCCTTTGAAGATGCGGTGGTCGATACGCTGATGATTAAGTGCAAGCGGGCGCTGGATCAGACGGGCTTTAAGCGACTGGTCATGGCGGGCGGCGTGAGTGCTAACCGTACGTTACGGGCGAAGCTGGCTGAAATGATGAAAAAACGCCGCGGCGAAGTGTTCTACGCGCGTCCGGAATTTTGTACTGATAACGGCGCGATGATCGCCTATGCCGGAATGGTGCGGTTTAAAGCAGGCGCGACGGCGGATCTCGGCGTTAGCGTGCGTCCGCGCTGGCCGCTGGCGGAGTTACCGGCTGCGTAA", 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"JW3037" - ], - [ - "gene_synonym", - "rpsU" - ], - [ - "gene_synonym", - "ECK3055" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68679" - ], - [ - "gene_synonym", - "ASAP:ABE-0010063" - ], - [ - "gene_synonym", - "GI:16130961" - ] - ], - "dna_sequence": "ATGCCGGTAATTAAAGTACGTGAAAACGAGCCGTTCGACGTAGCTCTGCGTCGCTTCAAGCGTTCCTGCGAAAAAGCAGGTGTTCTGGCGGAAGTTCGTCGTCGTGAGTTCTATGAAAAACCGACTACCGAACGTAAGCGCGCTAAAGCTTCTGCAGTGAAACGTCACGCGAAGAAACTGGCTCGCGAAAACGCACGCCGCACTCGTCTGTACTAA", - "dna_sequence_length": 216, - "functions": [ - "30S ribosomal subunit protein S21" - ], - "id": "CDS_3016", - "location": [ - [ - "NC_000913", - 3210781, - "+", - 216 - ] - ], - "md5": "bce532f52e802a7321862473ade6672e", - "parent_gene": "", - "protein_md5": "e0f63aa874b218a4c9d359851efe3e90", - "protein_translation": "MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKLARENARRTRLY", - "protein_translation_length": 71, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "dnaP" - ], - [ - "gene_synonym", - "b3066" - ], - [ - "gene_synonym", - "parB" - ], - [ - "gene_synonym", - "GeneID:947570" - ], - [ - "gene_synonym", - "ASAP:ABE-0010065" - ], - [ - "gene_synonym", - "ECK3056" - ], - [ - "gene_synonym", - "sdgA" - ], - [ - "gene_synonym", - "dnaG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABS5" - ], - [ - "gene_synonym", - "NP_417538.1" - ], - [ - "gene_synonym", - "EcoGene:EG10239" - ], - [ - "gene_synonym", - "GI:16130962" - ], - [ - "gene_synonym", - "JW3038" - ] - ], - "dna_sequence": "ATGGCTGGACGAATCCCACGCGTATTCATTAATGATCTGCTGGCACGCACTGACATCGTCGATCTGATCGATGCCCGTGTGAAGCTGAAAAAGCAGGGCAAGAATTTCCACGCGTGTTGTCCATTCCACAACGAGAAAACCCCGTCCTTCACCGTTAACGGTGAGAAACAGTTTTACCACTGCTTTGGATGTGGCGCGCACGGCAACGCGATCGACTTCCTGATGAACTACGACAAGCTCGAGTTCGTCGAAACGGTCGAAGAGCTGGCAGCAATGCACAATCTTGAAGTGCCATTTGAAGCAGGCAGCGGCCCCAGCCAGATCGAGCGCCATCAGAGGCAAACGCTTTATCAGTTGATGGACGGTCTGAATACGTTTTACCAACAATCTTTACAACAACCTGTTGCCACGTCTGCGCGCCAGTATCTGGAAAAACGCGGATTAAGCCACGAGGTTATCGCTCGCTTTGCGATTGGTTTTGCGCCCCCCGGCTGGGACAACGTCCTGAAGCGGTTTGGCGGCAATCCAGAAAATCGCCAGTCATTGATTGATGCGGGGATGTTGGTCACTAACGATCAGGGACGCAGTTACGATCGTTTCCGCGAGCGGGTGATGTTCCCCATTCGCGATAAACGCGGTCGGGTGATTGGTTTTGGCGGGCGCGTGCTGGGCAACGATACCCCCAAATACCTGAACTCGCCGGAAACAGACATTTTCCATAAAGGCCGCCAGCTTTACGGTCTTTATGAAGCGCAGCAGGATAACGCTGAACCCAATCGTCTGCTTGTGGTCGAAGGCTATATGGACGTGGTGGCGCTGGCGCAATACGGCATTAATTACGCCGTTGCGTCGTTAGGTACGTCAACCACCGCCGATCACATACAACTGTTGTTCCGCGCGACCAACAATGTCATTTGCTGTTATGACGGCGACCGTGCAGGCCGCGATGCCGCCTGGCGAGCGCTGGAAACGGCGCTGCCTTACATGACAGACGGCCGTCAGCTACGCTTTATGTTTTTGCCTGATGGCGAAGACCCTGACACGCTAGTACGAAAAGAAGGTAAAGAAGCGTTTGAAGCGCGGATGGAGCAGGCGATGCCACTCTCCGCATTTCTGTTTAACAGTCTGATGCCGCAAGTTGATCTGAGTACCCCTGACGGGCGCGCACGTTTGAGTACGCTGGCACTACCATTGATATCGCAAGTGCCGGGCGAAACGCTGCGAATATATCTTCGTCAGGAATTAGGCAACAAATTAGGCATACTTGATGACAGCCAGCTTGAACGATTAATGCCAAAAGCGGCAGAGAGCGGCGTTTCTCGCCCTGTTCCGCAGCTAAAACGCACGACCATGCGTATACTTATAGGGTTGCTGGTGCAAAATCCAGAATTAGCGACGTTGGTCCCGCCGCTTGAGAATCTGGATGAAAATAAGCTCCCTGGACTTGGCTTATTCAGAGAACTGGTCAACACTTGTCTCTCCCAGCCAGGTCTGACCACCGGGCAACTTTTAGAGCACTATCGTGGTACAAATAATGCTGCCACCCTTGAAAAACTGTCGATGTGGGACGATATAGCAGATAAGAATATTGCTGAGCAAACCTTCACCGACTCACTCAACCATATGTTTGATTCGCTGCTTGAACTGCGCCAGGAAGAGTTAATCGCTCGTGAGCGCACGCATGGTTTAAGCAACGAAGAACGCCTGGAGCTCTGGACATTAAACCAGGAGCTGGCGAAAAAGTGA", 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- [ - "gene_synonym", - "GeneID:947567" - ], - [ - "gene_synonym", - "GI:16130963" - ], - [ - "gene_synonym", - "EcoGene:EG10896" - ], - [ - "gene_synonym", - "ASAP:ABE-0010070" - ], - [ - "gene_synonym", - "ECK3057" - ], - [ - "gene_synonym", - "rpoD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00579" - ], - [ - "gene_synonym", - "alt" - ], - [ - "gene_synonym", - "NP_417539.1" - ], - [ - "gene_synonym", - "JW3039" - ] - ], - "dna_sequence": "ATGGAGCAAAACCCGCAGTCACAGCTGAAACTTCTTGTCACCCGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCTAAGCGTATTGAAGACGGGATCAACCAGGTTCAATGCTCCGTTGCTGAATATCCGGAAGCGATCACCTATCTGCTGGAACAGTACGATCGTGTTGAAGCAGAAGAAGCGCGTCTGTCCGATCTGATCACCGGCTTTGTTGACCCGAACGCAGAAGAAGATCTGGCACCTACCGCCACTCACGTCGGTTCTGAGCTTTCCCAGGAAGATCTGGACGATGACGAAGATGAAGACGAAGAAGATGGCGATGACGACAGCGCCGATGATGACAACAGCATCGACCCGGAACTGGCTCGCGAAAAATTTGCGGAACTACGCGCTCAGTACGTTGTAACGCGTGACACCATCAAAGCGAAAGGTCGCAGTCACGCTACCGCTCAGGAAGAGATCCTGAAACTGTCTGAAGTATTCAAACAGTTCCGCCTGGTGCCGAAGCAGTTTGACTACCTGGTCAACAGCATGCGCGTCATGATGGACCGCGTTCGTACGCAAGAACGTCTGATCATGAAGCTCTGCGTTGAGCAGTGCAAAATGCCGAAGAAAAACTTCATTACCCTGTTTACCGGCAACGAAACCAGCGATACCTGGTTCAACGCGGCAATTGCGATGAACAAGCCGTGGTCGGAAAAACTGCACGATGTCTCTGAAGAAGTGCATCGCGCCCTGCAAAAACTGCAGCAGATTGAAGAAGAAACCGGCCTGACCATCGAGCAGGTTAAAGATATCAACCGTCGTATGTCCATCGGTGAAGCGAAAGCCCGCCGTGCGAAGAAAGAGATGGTTGAAGCGAACTTACGTCTGGTTATTTCTATCGCTAAGAAATACACCAACCGTGGCTTGCAGTTCCTTGACCTGATTCAGGAAGGCAACATCGGTCTGATGAAAGCGGTTGATAAATTCGAATACCGCCGTGGTTACAAGTTCTCCACCTACGCAACCTGGTGGATCCGTCAGGCGATCACCCGCTCTATCGCGGATCAGGCGCGCACCATCCGTATTCCGGTGCATATGATTGAGACCATCAACAAGCTCAACCGTATTTCTCGCCAGATGCTGCAAGAGATGGGCCGTGAACCGACGCCGGAAGAACTGGCTGAACGTATGCTGATGCCGGAAGACAAGATCCGCAAAGTGCTGAAGATCGCCAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAA", 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"CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9H1" - ], - [ - "gene_synonym", - "ygjF" - ], - [ - "gene_synonym", - "b3068" - ], - [ - "gene_synonym", - "JW3040" - ], - [ - "gene_synonym", - "dug" - ], - [ - "gene_synonym", - "NP_417540.1" - ], - [ - "gene_synonym", - "mug" - ], - [ - "gene_synonym", - "ASAP:ABE-0010073" - ], - [ - "gene_synonym", - "GeneID:947560" - ], - [ - "gene_synonym", - "GI:16130964" - ], - [ - "gene_synonym", - "EcoGene:EG12717" - ], - [ - "gene_synonym", - "ECK3058" - ] - ], - "dna_sequence": "ATGGTTGAGGATATTTTGGCTCCAGGGTTACGGGTCGTGTTTTGCGGTATCAACCCTGGGCTTTCATCCGCCGGGACTGGTTTTCCCTTTGCTCATCCGGCAAATCGCTTCTGGAAGGTGATATATCAGGCCGGGTTTACCGACCGTCAGTTGAAGCCGCAGGAGGCACAGCATCTGCTGGATTATCGTTGTGGCGTCACCAAACTGGTAGACCGTCCAACGGTGCAAGCCAATGAAGTTTCAAAGCAGGAGCTACACGCAGGCGGGCGTAAGCTGATTGAAAAAATTGAAGATTATCAGCCGCAGGCGTTGGCGATTCTGGGCAAACAAGCATATGAACAGGGATTCAGCCAGCGCGGTGCACAGTGGGGGAAACAAACGCTCACCATTGGTTCGACGCAGATTTGGGTGCTGCCAAATCCCAGCGGTTTAAGTCGCGTTTCACTGGAGAAACTGGTTGAAGCGTATCGCGAGCTGGACCAGGCGCTGGTAGTGCGTGGGCGATAA", - "dna_sequence_length": 507, - "functions": [ - "G/U mismatch-specific DNA glycosylase", - "xanthine DNA glycosylase" - ], - "id": "CDS_3019", - "location": [ - [ - "NC_000913", - 3215473, - "-", - 507 - ] - ], - "md5": "d8f02ce49f67c02829375eb6606c6e5d", - "parent_gene": "", - "protein_md5": "75f1ddc04ebf9d5bc247ed264936c742", - "protein_translation": "MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQAGFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQANEVSKQELHAGGRKLIEKIEDYQPQALAILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELDQALVVRGR", - "protein_translation_length": 168, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yqjH" - ], - [ - "gene_synonym", - "EcoGene:EG12953" - ], - [ - "gene_synonym", - "GeneID:947582" - ], - [ - "gene_synonym", - "ECK3060" - ], - [ - "gene_synonym", - "JW3041" - ], - [ - "gene_synonym", - "NP_417541.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q46871" - ], - [ - "gene_synonym", - "ASAP:ABE-0010079" - ], - [ - "gene_synonym", - "GI:16130965" - ], - [ - "gene_synonym", - "b3070" - ] - ], - "dna_sequence": "ATGAATAACACCCCCCGCTACCCGCAGCGCGTTCGCAATGATCTGCGCTTCCGTGAACTGACTGTGTTACGCGTTGAGCGCATCAGCGCCGGTTTTCAGCGCATTGTCCTCGGCGGCGAGGCGCTGGACGGTTTTACATCGCGTGGCTTTGACGATCACAGCAAACTCTTCTTTCCTCAACCTGACGCTCACTTTGTGCCGCCAACGGTAACGGAAGAGGGCATCGTCTGGCCGGAAGGACCACGCCCACCGTCGCGTGACTATACGCCGCTGTATGACGAACTACGCCATGAACTGGCGATTGATTTCTTTATTCACGACGGTGGGGTCGCCAGCGGCTGGGCGATGCAGGCGCAACCGGGCGATAAACTTACGGTGGCAGGTCCGCGCGGTTCGCTGGTGGTGCCGGAAGATTACGCGTATCAGCTGTATGTCTGCGATGAATCCGGAATGCCTGCATTGCGCCGCCGCCTGGAAACGTTGAGCAAACTTGCCGTTAAACCGCAAGTTAGTGCGCTGGTTAGCGTGCGGGATAACGCCTGTCAGGATTATCTCGCGCACCTTGATGGTTTTAATATCGAATGGCTGGCACATGATGAGCAGGCGGTAGATGCGCGTCTGGCGCAGATGCAAATCCCTGCCGATGATTACTTCATCTGGATAACCGGCGAAGGTAAAGTCGTTAAGAATTTAAGCCGCCGCTTTGAAGCGGAACAGTATGACCCACAGCGGGTACGTGCAGCGGCTTACTGGCACGCAAAGTAA", - "dna_sequence_length": 765, - "functions": [ - "putative siderophore interacting protein" - ], - "id": "CDS_3020", - "location": [ - [ - "NC_000913", - 3216491, - "-", - 765 - ] - ], - "md5": "5788610d52e232e532b2860046b9d024", - "parent_gene": "", - "protein_md5": "89743da0e8d34386567f46ec472079d8", - "protein_translation": "MNNTPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLETLSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQYDPQRVRAAAYWHAK", - "protein_translation_length": 254, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yqjI" - ], - [ - "gene_synonym", - "EcoGene:EG12954" - ], - [ - "gene_synonym", - "ECK3061" - ], - [ - "gene_synonym", - "JW3042" - ], - [ - "gene_synonym", - "GeneID:947584" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64588" - ], - [ - "gene_synonym", - "ASAP:ABE-0010084" - ], - [ - "gene_synonym", - "GI:16130966" - ], - [ - "gene_synonym", - "b3071" - ], - [ - "gene_synonym", - "NP_417542.1" - ] - ], - "dna_sequence": "ATGAGCCATCATCACGAAGGGTGTTGTAAACATGAAGGCCAGCCACGCCATGAGGGCTGCTGCAAAGGTGAGAAGTCAGAACACGAGCACTGCGGACACGGTCACCAGCATGAACACGGTCAATGCTGCGGTGGTCGCCACGGTCGCGGCGGCGGTCGTCGGCAACGTTTCTTTGGTCACGGTGAATTACGTCTGGTGATTCTGGATATTCTCTCGCGCGATGACAGCCACGGTTACGAATTGATTAAAGCGATTGAGAATCTAACCCAGGGGAATTACACCCCAAGCCCGGGCGTCATCTACCCAACGCTGGATTTTCTGCAGGAGCAGTCGCTGATTACCATCCGCGAAGAGGAAGGAGGTAAGAAGCAGATTGCGCTGACCGAACAAGGCGCGCAGTGGCTGGAAGAAAACCGCGAACAGGTGGAGATGATTGAAGAACGCATCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCAGAACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGCACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAA", - "dna_sequence_length": 624, - "functions": [ - "PadR family putative transcriptional regulator" - ], - "id": "CDS_3021", - "location": [ - [ - "NC_000913", - 3216779, - "+", - 624 - ] - ], - "md5": "8f7953f9fac78d5b8c45dbd5eb6a33b0", - "parent_gene": "", - "protein_md5": "9e7b731c1405f719730bee5ea85424e0", - "protein_translation": "MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD", - "protein_translation_length": 207, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yqjJ" - ], - [ - "gene_synonym", - "aer" - ], - [ - "gene_synonym", - "NP_417543.1" - ], - [ - "gene_synonym", - "EcoGene:EG12955" - ], - [ - "gene_synonym", - "ECK3062" - ], - [ - "gene_synonym", - "air" - ], - [ - "gene_synonym", - "JW3043" - ], - [ - "gene_synonym", - "GI:16130967" - ], - [ - "gene_synonym", - "b3072" - ], - [ - "gene_synonym", - "ASAP:ABE-0010087" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P50466" - ], - [ - "gene_synonym", - "GeneID:945301" - ] - ], - "dna_sequence": "ATGTCTTCTCATCCGTATGTCACCCAGCAAAATACCCCGCTGGCGGACGATACCACTCTGATGTCCACTACCGATCTGCAAAGCTATATCACTCATGCTAATGACACTTTTGTGCAGGTGAGCGGCTATACCTTGCAAGAGTTACAAGGGCAGCCGCACAACATGGTGCGTCACCCGGATATGCCAAAAGCGGCGTTTGCGGATATGTGGTTCACCCTGAAAAAAGGGGAGCCCTGGAGCGGCATCGTGAAAAATCGCCGCAAAAATGGTGACCATTATTGGGTGCGGGCCAATGCGGTACCGATGGTGCGCGAGGGAAAAATCAGTGGCTATATGTCGATTCGTACCCGGGCGACGGATGAAGAGATCGCGGCGGTGGAGCCGCTGTACAAAGCGTTGAACGCCGGACGTACCAGTAAGCGTATTCATAAAGGCCTGGTGGTGCGTAAAGGCTGGCTGGGTAAACTGCCTTCATTACCGCTTCGCTGGCGGGCGCGTGGAGTGATGACCCTGATGTTTATCTTGCTGGCGGCCATGCTTTGGTTTGTTGCTGCCCCGGTGGTGACGTATATCCTCTGTGCGTTAGTGGTATTGTTGGCAAGCGCCTGTTTTGAATGGCAGATTGTGCGCCCGATAGAAAATGTTGCCCATCAGGCACTGAAGGTGGCGACCGGAGAACGTAATAGTGTTGAGCATCTGAATCGCAGCGATGAGCTGGGGCTGACATTACGTGCGGTAGGGCAACTTGGCCTGATGTGCCGTTGGCTAATTAACGATGTCTCAAGCCAGGTGTCCAGTGTCAGAAATGGCAGTGAGACGCTGGCGAAAGGCACCGATGAACTGAACGAACATACCCAGCAGACAGTTGATAACGTTCAGCAAACGGTGGCGACCATGAACCAAATGGCGGCGTCGGTGAAACAGAACTCTGCCACGGCGTCGGCTGCCGATAAACTGTCAATCACTGCCAGTAATGCGGCAGTGCAGGGTGGGGAGGCGATGACCACGGTGATCAAGACAATGGACGATATCGCCGACAGTACCCAGCGCATTGGCACCATTACTTCGCTGATTAACGATATTGCGTTTCAGACCAATATTCTGGCCCTGAATGCGGCGGTGGAAGCGGCGCGTGCCGGCGAACAGGGCAAAGGTTTTGCAGTGGTGGCAGGGGAAGTGCGTCATTTAGCCAGCCGCAGCGCTAATGCTGCCAACGATATTCGCAAGCTGATTGATGCCAGTGCTGATAAGGTGCAATCCGGTTCGCAGCAGGTACACGCCGCCGGACGGACGATGGAAGATATTGTGGCACAGGTGAAAAACGTCACCCAGTTGATCGCCCAGATTAGCCATTCAACGCTGGAACAGGCCGATGGGCTTTCCAGCCTGACCCGTGCAGTGGATGAGCTTAACCTGATCACCCAGAAAAATGCCGAGCTGGTGGAAGAGAGTGCGCAGGTGTCGGCGATGGTGAAACACCGCGCCAGCCGACTGGAAGACGCGGTGACGGTACTGCATTAA", 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"NP_417544.5" - ], - [ - "gene_synonym", - "ygjG" - ], - [ - "gene_synonym", - "GeneID:947120" - ], - [ - "gene_synonym", - "ECK3063" - ], - [ - "gene_synonym", - "EcoGene:EG12718" - ], - [ - "gene_synonym", - "patA" - ], - [ - "gene_synonym", - "ASAP:ABE-0010092" - ], - [ - "gene_synonym", - "JW5510" - ], - [ - "gene_synonym", - "GI:145698310" - ], - [ - "gene_synonym", - "b3073" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42588" - ] - ], - "dna_sequence": "TTGAACAGGTTACCTTCGAGCGCATCGGCTTTAGCGTGCAGCGCCCACGCCCTGAATCTCATTGAGAAGCGAACGCTGGATCATGAGGAGATGAAAGCACTTAACCGAGAGGTGATTGAATACTTCAAAGAGCATGTCAATCCGGGGTTTTTAGAGTATCGCAAATCTGTTACCGCCGGCGGGGATTACGGAGCCGTAGAGTGGCAAGCGGGAAGTTTAAATACGCTTGTCGACACCCAGGGCCAGGAGTTTATCGACTGCCTGGGAGGTTTTGGAATTTTCAACGTGGGGCACCGTAATCCAGTTGTGGTTTCCGCCGTACAGAATCAACTTGCGAAACAACCGCTGCACAGCCAGGAGCTGCTCGATCCGTTACGGGCGATGTTGGCGAAAACCCTTGCTGCGCTAACGCCCGGTAAACTGAAATACAGCTTCTTCTGTAATAGCGGCACCGAGTCCGTTGAAGCAGCGCTGAAGCTGGCGAAAGCTTACCAGTCACCGCGCGGCAAGTTTACTTTTATTGCCACCAGCGGCGCGTTCCACGGTAAATCACTTGGCGCGCTGTCGGCCACGGCGAAATCGACCTTCCGCAAACCGTTTATGCCGTTACTGCCGGGCTTCCGTCATGTGCCGTTTGGCAATATCGAAGCCATGCGCACGGCTCTTAACGAGTGCAAAAAAACCGGTGATGATGTGGCTGCGGTGATCCTCGAACCGATTCAGGGTGAAGGTGGCGTAATTCTGCCGCCGCCGGGCTATCTCACCGCCGTACGTAAGCTATGCGATGAGTTCGGCGCACTGATGATCCTCGATGAAGTACAAACGGGCATGGGGCGCACGGGCAAGATGTTCGCCTGCGAGCATGAGAACGTACAGCCGGATATCCTCTGCCTTGCCAAAGCGCTCGGCGGCGGCGTGATGCCGATTGGCGCGACCATCGCCACTGAAGAGGTGTTTTCAGTTCTGTTCGACAACCCATTCCTGCATACCACCACCTTTGGCGGCAACCCGCTGGCCTGTGCGGCGGCGCTGGCGACCATCAATGTGTTGCTGGAGCAGAACTTACCGGCTCAGGCTGAGCAAAAAGGCGATATGTTGCTGGACGGTTTCCGTCAACTGGCGCGGGAATATCCCGATCTGGTACAGGAAGCGCGTGGTAAAGGGATGTTGATGGCGATTGAGTTTGTTGATAACGAAATCGGCTATAACTTTGCCAGCGAGATGTTCCGCCAGCGCGTACTGGTGGCCGGAACGCTCAATAACGCCAAAACGATCCGCATTGAACCGCCACTGACACTGACCATTGAACAGTGTGAACTGGTGATCAAAGCGGCGCGTAAGGCGCTGGCGGCCATGCGAGTAAGTGTCGAAGAAGCGTAA", - "dna_sequence_length": 1380, - "functions": [ - "putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent" - ], - "id": "CDS_3023", - "location": [ - [ - "NC_000913", - 3219494, - "+", - 1380 - ] - ], - "md5": "02cccfbe9ca8186762f19b791ee2854b", - "parent_gene": "", - "protein_md5": "9cc7fea250614a449e1972be0e294ae7", - "protein_translation": "MNRLPSSASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALAAMRVSVEEA", - "protein_translation_length": 459, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygjH" - ], - [ - "gene_synonym", - "ECK3064" - ], - [ - "gene_synonym", - "NP_417545.1" - ], - [ - "gene_synonym", - "GeneID:946251" - ], - [ - "gene_synonym", - "EcoGene:EG12719" - ], - [ - "gene_synonym", - "GI:16130969" - ], - [ - "gene_synonym", - "JW3045" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42589" - ], - [ - "gene_synonym", - "ASAP:ABE-0010094" - ], - [ - "gene_synonym", - "b3074" - ] - ], - "dna_sequence": "ATGGAAACCGTGGCTTACGCTGATTTTGCACGTCTGGAAATGCGCGTCGGAAAGATTGTGGAAGTGAAACGCCATGAAAACGCCGACAAGCTGTACATCGTACAGGTTGATGTGGGGCAAAAAACGCTGCAAACCGTGACCAGCCTGGTGCCGTACTACAGCGAAGAAGAGCTGATGGGGAAAACGGTGGTGGTCTTATGCAATCTGCAAAAAGCGAAAATGCGTGGTGAAACGTCGGAATGCATGCTGTTGTGTGCGGAAACCGATGACGGCAGTGAAAGCGTGCTGTTAACGCCGGAGCGGATGATGCCTGCGGGCGTACGCGTCGTATAA", - "dna_sequence_length": 333, - "functions": [ - "putative tRNA binding protein", - "putative tRNA corner chaperone" - ], - "id": "CDS_3024", - "location": [ - [ - "NC_000913", - 3221247, - "-", - 333 - ] - ], - "md5": "382450f5690beced4389c3a161e7a9f8", - "parent_gene": "", - "protein_md5": "3b1620e059d8bad80a31586fb0dc07aa", - "protein_translation": "METVAYADFARLEMRVGKIVEVKRHENADKLYIVQVDVGQKTLQTVTSLVPYYSEEELMGKTVVVLCNLQKAKMRGETSECMLLCAETDDGSESVLLTPERMMPAGVRVV", - "protein_translation_length": 110, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06846" - ], - [ - "gene_synonym", - "NP_417546.1" - ], - [ - "gene_synonym", - "ECK3065" - ], - [ - "gene_synonym", - "GeneID:947586" - ], - [ - "gene_synonym", - "ASAP:ABE-0010099" - ], - [ - "gene_synonym", - "JW3046" - ], - [ - "gene_synonym", - "ebgR" - ], - [ - "gene_synonym", - "GI:16130970" - ], - [ - "gene_synonym", - "EcoGene:EG10254" - ], - [ - "gene_synonym", - "b3075" - ] - ], - "dna_sequence": "ATGGCAACACTAAAAGACATCGCAATCGAAGCTGGCGTATCCCTGGCGACAGTATCCAGGGTCTTAAATGACGATCCGACATTGAATGTGAAAGAAGAGACGAAACATCGCATTCTCGAGATCGCCGAAAAGCTGGAGTACAAGACCAGTAGTGCCCGTAAACTCCAGACAGGTGCAGTCAACCAACACCATATTCTGGCTATCTACAGCTACCAGCAGGAGCTGGAGATCAACGATCCTTACTATCTGGCGATCCGCCACGGCATTGAAACCCAGTGCGAAAAGCTGGGCATCGAGCTCACCAACTGTTATGAACACAGCGGCTTACCAGACATTAAAAACGTCACCGGTATTTTAATTGTCGGCAAACCCACGCCCGCCCTGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAGGGCGTTAATCGTATTGGTTTTATTGGCGGTGAAGATGAGCCTGGCAAGGCGGATATTCGTGAGGTCGCCTTTGCGGAATATGGCCGACTGAAACAAGTGGTACGCGAAGAGGATATCTGGCGCGGCGGTTTTTCCAGTTCGTCGGGTTATGAACTGGCAAAACAAATGCTGGCGCGGGAAGACTATCCGAAGGCACTGTTTGTTGCTTCCGATTCCATTGCTATCGGCGTACTGCGGGCAATTCATGAACGAGGCCTGAACATCCCACAGGATATTTCGCTTATCAGCGTTAACGATATCCCCACCGCGCGATTTACCTTTCCGCCGCTCTCCACCGTGCGCATCCATTCCGAGATGATGGGAAGTCAGGGCGTTAACCTGGTGTATGAAAAAGCCCGCGATGGTCGCGCGCTGCCGCTGTTAGTCTTCGTTCCCAGCAAATTAAAACTGCGCGGCACGACCCGTTAA", - "dna_sequence_length": 984, - "functions": [ - "transcriptional repressor" - ], - "id": "CDS_3025", - "location": [ - [ - "NC_000913", - 3221466, - "+", - 984 - ] - ], - "md5": "8515deae7bb86e322ac631666427de65", - "parent_gene": "", - "protein_md5": "f3727352e1569bc404d406943a74ceb2", - "protein_translation": "MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEKLEYKTSSARKLQTGAVNQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTNCYEHSGLPDIKNVTGILIVGKPTPALRAAASALTDNICFIDFHEPGSGYDAVDIDLARISKEIIDFYINQGVNRIGFIGGEDEPGKADIREVAFAEYGRLKQVVREEDIWRGGFSSSSGYELAKQMLAREDYPKALFVASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTARFTFPPLSTVRIHSEMMGSQGVNLVYEKARDGRALPLLVFVPSKLKLRGTTR", - "protein_translation_length": 327, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06864" - ], - [ - "gene_synonym", - "GI:49176308" - ], - [ - "gene_synonym", - "ebgA" - ], - [ - "gene_synonym", - "YP_026199.1" - ], - [ - "gene_synonym", - "ECK3066" - ], - [ - "gene_synonym", - "GeneID:947583" - ], - [ - "gene_synonym", - "JW5511" - ], - [ - "gene_synonym", - "ASAP:ABE-0010104" - ], - [ - "gene_synonym", - "EcoGene:EG10252" - ], - [ - "gene_synonym", - "b3076" - ] - ], - "dna_sequence": "ATGAATCGCTGGGAAAACATTCAGCTCACCCACGAAAACCGACTTGCGCCGCGTGCGTACTTTTTTTCATATGATTCTGTTGCGCAAGCGCGTACCTTTGCCCGCGAAACCAGCAGCCTGTTTCTGCCCTTAAGCGGTCAGTGGAATTTCCACTTTTTTGACCATCCGCTGCAAGTACCAGAAGCCTTCACCTCTGAGTTAATGGCTGACTGGGGGCATATTACCGTCCCCGCCATGTGGCAAATGGAAGGTCACGGCAAACTGCAATATACCGACGAAGGTTTTCCGTTCCCCATCGATGTGCCGTTTGTCCCCAGCGATAACCCAACCGGTGCCTATCAACGTATTTTCACCCTCAGCGACGGCTGGCAGGGTAAACAGACGCTGATTAAATTTGACGGCGTCGAAACCTATTTTGAAGTCTATGTTAACGGTCAGTATGTGGGTTTCAGCAAGGGCAGTCGCCTGACCGCAGAGTTTGACATCAGCGCGATGGTTAAAACCGGCGACAACCTGTTGTGTGTGCGCGTGATGCAGTGGGCGGACTCTACCTACGTGGAAGACCAGGATATGTGGTGGTCAGCGGGGATCTTCCGCGATGTTTATCTGGTCGGAAAACACCTAACGCATATTAACGATTTCACTGTGCGTACCGACTTTGACGAAGCCTATTGCGATGCCACGCTTTCCTGCGAAGTGGTGCTGGAAAATCTCGCCGCCTCCCCTGTCGTCACGACGCTGGAATATACCCTGTTTGATGGCGAACGCGTGGTGCACAGCAGCGCCATTGATCATTTGGCAATTGAAAAACTGACCAGCGCCAGCTTTGCTTTTACTGTCGAACAGCCGCAGCAATGGTCAGCAGAATCCCCTTATCTTTACCATCTGGTCATGACGCTGAAAGACGCCAACGGCAACGTTCTGGAAGTGGTGCCACAACGCGTTGGCTTCCGTGATATCAAAGTGCGCGACGGTCTGTTCTGGATCAATAACCGTTATGTGATGCTGCACGGCGTCAACCGTCACGACAACGATCATCGCAAAGGCCGCGCCGTTGGAATGGATCGCGTCGAGAAAGATCTCCAGTTGATGAAGCAGCACAATATCAACTCCGTGCGTACCGCTCACTACCCGAACGATCCGCGTTTTTACGAACTGTGTGATATCTACGGCCTGTTTGTGATGGCGGAAACCGACGTCGAATCGCACGGCTTTGCTAATGTCGGCGATATTAGCCGTATTACCGACGATCCGCAGTGGGAAAAAGTCTACGTCGAGCGCATTGTTCGCCATATCCACGCGCAGAAAAACCATCCGTCGATCATCATCTGGTCGCTGGGCAATGAATCCGGCTATGGCTGTAACATCCGCGCGATGTACCATGCGGCGAAAGCGCTGGATGACACGCGACTGGTGCATTACGAAGAAGATCGCGATGCTGAAGTGGTCGATATTATTTCCACCATGTACACCCGCGTGCCGCTGATGAATGAGTTTGGTGAATACCCGCATCCGAAGCCGCGCATCATCTGTGAATATGCTCATGCGATGGGGAACGGACCGGGCGGGCTGACGGAGTACCAGAACGTCTTCTATAAGCACGATTGCATTCAGGGTCATTATGTCTGGGAGTGGTGCGACCACGGGATCCAGGCACAGGACGACCACGGCAATGTCTGGTATAAATTCGGCGGCGACTACGGCGACTATCCCAACAACTATAACTTCTGTCTTGATGGTTTGATCTATTCCGATCAGACGCCGGGACCGGGCCTGAAAGAGTACAAACAGGTTATCGCGCCGGTAAAAATCCACGCGCGGGATCTGACTCGCGGCGAGTTGAAAGTCGAAAATAAACTGTGGTTTACCACGCTTGATGACTACACCCTGCACGCAGAGGTGCGCGCCGAAGGTGAAACGCTCGCGACGCAGCAGATTAAACTGCGCGACGTTGCGCCGAACAGCGAAGCCCCCTTGCAGATCACGCTGCCGCAGCTGGACGCCCGCGAAGCGTTCCTCAACATTACGGTGACCAAAGATTCCCGCACCCGCTACAGCGAAGCCGGACACCCTATCGCCACTTATCAGTTCCCGCTGAAGGAAAACACCGCGCAGCCAGTGCCTTTCGCACCAAATAATGCGCGTCCGCTGACGCTGGAAGACGATCGTTTGAGCTGCACCGTTCGCGGCTACAACTTCGCGATCACCTTCTCAAAAATGAGTGGCAAACCGACATCCTGGCAGGTGAATGGCGAATCGCTGCTGACTCGCGAGCCAAAGATCAACTTCTTCAAGCCGATGATCGACAACCACAAGCAGGAGTACGAAGGGCTGTGGCAACCGAATCATTTGCAGATCATGCAGGAACATCTGCGCGACTTTGCCGTAGAACAGAGCGATGGTGAAGTGCTGATCATCAGCCGCACAGTTATTGCCCCGCCGGTGTTTGACTTCGGGATGCGCTGCACCTACATCTGGCGCATCGCTGCCGATGGCCAGGTTAACGTGGCGCTTTCCGGCGAGCGTTACGGCGACTATCCGCACATCATTCCGTGCATCGGTTTCACCATGGGAATTAACGGCGAATACGATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCACCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACTAACCGCCACGGTAACGGTCTGCTGGTGGTTCCGCAGCGCCCAATTAACTTCAGCGCCTGGCACTATACCCAGGAAAACATCCACGCTGCCCAGCACTGTAACGAGCTGCAGCGCAGTGATGACATCACCCTGAACCTCGATCACCAGCTGCTTGGCCTCGGCTCCAACTCCTGGGGCAGCGAGGTGCTGGACTCCTGGCGCGTCTGGTTCCGTGACTTCAGCTACGGCTTTACGTTGCTGCCGGTTTCTGGCGGAGAAGCTACCGCGCAAAGCCTGGCGTCGTATGAGTTCGGCGCAGGGTTCTTTTCCACGAATTTGCACAGCGAGAATAAGCAATGA", 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"MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLPLSGQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMWQMEGHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRIFTLSDGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFDISAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRTDFDEAYCDATLSCEVVLENLAASPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDIKVRDGLFWINNRYVMLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAETDVESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNESGYGCNIRAMYHAAKALDDTRLVHYEEDRDAEVVDIISTMYTRVPLMNEFGEYPHPKPRIICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDHGNVWYKFGGDYGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIAPVKIHARDLTRGELKVENKLWFTTLDDYTLHAEVRAEGETLATQQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSRTRYSEAGHPIATYQFPLKENTAQPVPFAPNNARPLTLEDDRLSCTVRGYNFAITFSKMSGKPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQSDGEVLIISRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSGERYGDYPHIIPCIGFTMGINGEYDQVAYYGRGPGENYADSQQANIIDIWRSTVDAMFENYPFPQNNGNRQHVRWTALTNRHGNGLLVVPQRPINFSAWHYTQENIHAAQHCNELQRSDDITLNLDHQLLGLGSNSWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFFSTNLHSENKQ", - "protein_translation_length": 1030, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417548.1" - ], - [ - "gene_synonym", - "ebgC" - ], - [ - "gene_synonym", - "ECK3067" - ], - [ - "gene_synonym", - "GeneID:947581" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC73" - ], - [ - "gene_synonym", - "EcoGene:EG10253" - ], - [ - "gene_synonym", - "JW3048" - ], - [ - "gene_synonym", - "b3077" - ], - [ - "gene_synonym", - "ASAP:ABE-0010106" - ], - [ - "gene_synonym", - "GI:16130972" - ] - ], - "dna_sequence": "ATGAGGATCATCGATAACTTAGAACAGTTCCGCCAGATTTACGCCTCTGGCAAGAAGTGGCAACGCTGCGTTGAAGCGATTGAAAATATCGACAACATTCAGCCTGGCGTCGCCCACTCCATCGGTGACTCATTGACTTACCGCGTGGAGACAGACTCCGCGACCGATGCGCTATTTACCGGGCATCGACGCTATTTTGAAGTGCATTACTACCTGCAAGGGCAGCAAAAAATTGAATATGCGCCGAAAGAGACATTACAGGTAGTGGAATATTATCGTGATGAAACTGACCGTGAATATTTAAAAGGCTGCGGAGAAACCGTTGAGGTCCACGAAGGGCAAATCGTTATTTGCGATATCCATGAAGCGTATCGGTTTATCTGCAATAACGCGGTCAAAAAAGTGGTTCTCAAAGTCACCATCGAAGATGGTTATTTCCATAACAAATAA", - "dna_sequence_length": 450, - "functions": [ - "evolved beta-D-galactosidase, beta subunit", - "cupin superfamily" - ], - "id": "CDS_3027", - "location": [ - [ - "NC_000913", - 3225722, - "+", - 450 - ] - ], - "md5": "4c407aabc67f37752277fa062169fe75", - "parent_gene": "", - "protein_md5": "a66343ae1ae0ed0862055ecd995a3a4f", - "protein_translation": "MRIIDNLEQFRQIYASGKKWQRCVEAIENIDNIQPGVAHSIGDSLTYRVETDSATDALFTGHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLKGCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK", - "protein_translation_length": 149, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:49176309" - ], - [ - "gene_synonym", - "EcoGene:EG12720" - ], - [ - "gene_synonym", - "ebgB" - ], - [ - "gene_synonym", - "ECK3068" - ], - [ - "gene_synonym", - "GeneID:947579" - ], - [ - "gene_synonym", - "ygjI" - ], - [ - "gene_synonym", - "YP_026200.1" - ], - [ - "gene_synonym", - "JW5512" - ], - [ - "gene_synonym", - "b3078" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42590" - ], - [ - "gene_synonym", - "ASAP:ABE-0010110" - ] - ], - "dna_sequence": "ATGTCTGATACCAAACGTAATACAATCGGCAAATTCGGCTTGCTCTCGCTGACTTTTGCCGCCGTTTACAGCTTTAACAACGTTATCAATAATAATATTGAGCTTGGACTGGCCTCGGCACCGATGTTTTTCCTCGCGACGATTTTTTATTTTATTCCCTTCTGTCTGATCATCGCAGAATTTGTTTCGTTAAATAAAAACTCAGAAGCCGGTGTCTACGCGTGGGTAAAAAGTTCGCTGGGCGGACGTTGGGCATTTATTACTGCCTATACCTACTGGTTCGTAAACCTGTTCTTTTTCACCTCACTGTTGCCGCGCGTTATTGCTTATGCTTCGTATGCCTTCCTCGGATACGAATATATTATGACGCCGGTTGCCACCACCATTATCAGTATGGTGCTGTTCGCCTTCTCCACCTGGGTTTCCACCAACGGGGCGAAAATGTTGGGGCCAATTACCTCCGTCACTTCAACGCTGATGCTGCTGTTAACGCTCTCCTACATTTTACTGGCAGGTACGGCGCTGGTTGGCGGCGTACAGCCTGCTGACGCCATCACCGTTGACGCGATGATCCCGAACTTCAACTGGGCGTTCCTCGGCGTTACCACCTGGATCTTTATGGCCGCAGGTGGCGCGGAGTCCGTCGCTGTGTACGTTAACGACGTCAAAGGCGGTTCGAAATCGTTCGTTAAAGTGATCATCCTCGCCGGGATTTTTATCGGCGTACTGTATTCCGTCTCCTCGGTGCTGATTAACGTCTTCGTCAGCAGCAAAGAGTTGAAATTTACCGGCGGATCGGTGCAGGTATTCCACGGCATGGCGGCGTATTTTGGTCTACCGGAAGCGTTGATGAATCGCTTTGTCGGTCTGGTGTCCTTTACCGCGATGTTCGGTTCCCTGCTGATGTGGACCGCAACGCCGGTGAAAATTTTCTTCTCCGAAATCCCGGAAGGCATCTTTGGTAAGAAAACCGTCGAACTGAACGAAAACGGCGTTCCGGCGCGCGCAGCGTGGATCCAGTTCCTGATCGTCATCCCGCTGATGATTATCCCGATGCTCGGTTCCAATACCGTGCAGGATCTGATGAATACTATTATTAATATGACCGCCGCAGCGTCCATGCTTCCGCCGTTATTCATCATGCTGGCTTACCTGAATTTACGCGCCAAATTAGATCACCTGCCACGCGATTTCCGTATGGGCTCCCGCCGCACCGGTATTATCGTTGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGCGAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGCGACGCCAGCCAGCAATGTTGATTAA", - "dna_sequence_length": 1434, - "functions": [ - "putative transporter" - ], - "id": "CDS_3028", - "location": [ - [ - "NC_000913", - 3226234, - "+", - 1434 - ] - ], - "md5": "2019b27769838883faa5909863e1f95d", - "parent_gene": "", - "protein_md5": "a2eb5d385ad3a165afe233ad8a00166e", - "protein_translation": "MSDTKRNTIGKFGLLSLTFAAVYSFNNVINNNIELGLASAPMFFLATIFYFIPFCLIIAEFVSLNKNSEAGVYAWVKSSLGGRWAFITAYTYWFVNLFFFTSLLPRVIAYASYAFLGYEYIMTPVATTIISMVLFAFSTWVSTNGAKMLGPITSVTSTLMLLLTLSYILLAGTALVGGVQPADAITVDAMIPNFNWAFLGVTTWIFMAAGGAESVAVYVNDVKGGSKSFVKVIILAGIFIGVLYSVSSVLINVFVSSKELKFTGGSVQVFHGMAAYFGLPEALMNRFVGLVSFTAMFGSLLMWTATPVKIFFSEIPEGIFGKKTVELNENGVPARAAWIQFLIVIPLMIIPMLGSNTVQDLMNTIINMTAAASMLPPLFIMLAYLNLRAKLDHLPRDFRMGSRRTGIIVVSMLIAIFAVGFVASTFPTGANILTIIFYNVGGIVIFLGFAWWKYSKYIKGLTAEERHIEATPASNVD", - "protein_translation_length": 477, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12721" - ], - [ - "gene_synonym", - "ygjJ" - ], - [ - "gene_synonym", - "ECK3069" - ], - [ - "gene_synonym", - "NP_417550.1" - ], - [ - "gene_synonym", - "JW3050" - ], - [ - "gene_synonym", - "b3079" - ], - [ - "gene_synonym", - "GeneID:947597" - ], - [ - "gene_synonym", - "GI:16130974" - ], - [ - "gene_synonym", - "ASAP:ABE-0010115" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42591" - ] - ], - "dna_sequence": "ATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCTCTGCCGTTTTGCTACGCCTTTTCTGCGGCAGGAGAAGAAGCACGTCCGGCAGAACATGACGACACAAAAACACCCGCAATTACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAATTAGGGGTTGGTGGATATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGTACCTATATTGAAGGTGGCCTGGAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGACCACGACGGCAATGCCTGGGTGCCAGACCATAGCTGGGGTGGTTTCGAGGGCGGAATTAACCGTTTCTATGGCGGTTATCGTACCAATGATGGCACCGAAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACCCCCGATCTGGGCTACGTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTCACCGCGACTCCTGCCGGACATCATGATGAAAGCAAAGCCTGGCTACATTTTGGCAAATACGATCGCTATGACGACAAATACACCTATCCGGCAATGATGAACGGTTACATCCAGTATGACCTTGCCGAAGGCATCACCTGGATGAACGGTCTGGAAATCACCGACGGCACAGGACAGCTCTATCTCACGGGCCTGCTAACTCCTAACTTTGCCGCTCGCGCCTGGCACCATACCGGACGCGCCGACGGGCTGGACGTACCGGGAAGTGAAAGTGGGATGATGGTGAGCGCCATGTATGAAGCGTTAAAGGGCGTTTATCTCTCCACCGCTTACACCTACGCCAAACATCGCCCTGACCACGCTGACGATGAAACCACCTCTTTCATGCAGTTTGGTATCTGGTACGAATACGGCGGCGGACGTTTCGCCACGGCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTCACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTGGTAA", - "dna_sequence_length": 1071, - "functions": [ - "putative periplasmic protein" - ], - "id": "CDS_3029", - "location": [ - [ - "NC_000913", - 3227801, - "+", - 1071 - ] - ], - "md5": "10c4a84b592c30afbe00bfb698bbd9cc", - "parent_gene": "", - "protein_md5": "1578375503ad9ce17119c810896a5e38", - "protein_translation": "MKLITAPCRALLALPFCYAFSAAGEEARPAEHDDTKTPAITSTSSPSFRFYGELGVGGYMDLEGENKHKYSDGTYIEGGLEMKYGSWFGLIYGEGWTVQADHDGNAWVPDHSWGGFEGGINRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGYVIPNTRDIMTALKVQNLSGNFRYSVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMMNGYIQYDLAEGITWMNGLEITDGTGQLYLTGLLTPNFAARAWHHTGRADGLDVPGSESGMMVSAMYEALKGVYLSTAYTYAKHRPDHADDETTSFMQFGIWYEYGGGRFATAFDSRFYMKNASHDPSDQIFLMQYFYW", - "protein_translation_length": 356, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12722" - ], - [ - "gene_synonym", - "ygjK" - ], - [ - "gene_synonym", - "b3080" - ], - [ - "gene_synonym", - "ECK3070" - ], - [ - "gene_synonym", - "JW3051" - ], - [ - "gene_synonym", - "GeneID:947596" - ], - [ - "gene_synonym", - "ASAP:ABE-0010118" - ], - [ - "gene_synonym", - "GI:16130975" - ], - [ - "gene_synonym", - "NP_417551.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42592" - ] - ], - "dna_sequence": "ATGAAAATAAAAACTATTTTAACGCCAGTAACCTGCGCTCTGCTGATAAGTTTTTCCGCCCATGCCGCTAACGCCGACAATTATAAAAACGTGATTAACCGTACTGGCGCGCCGCAGTACATGAAGGATTACGATTACGACGATCACCAGCGTTTTAATCCGTTTTTCGATCTCGGAGCCTGGCATGGTCATCTGTTGCCAGACGGCCCTAACACCATGGGCGGCTTTCCGGGCGTTGCGCTGCTGACGGAAGAGTACATCAACTTTATGGCCAGCAATTTCGACCGCCTGACCGTCTGGCAGGACGGCAAGAAAGTCGACTTTACGCTGGAGGCATACAGTATTCCCGGTGCGCTGGTGCAAAAACTGACAGCAAAAGATGTGCAAGTCGAAATGACTCTGCGCTTCGCCACGCCGCGCACGTCACTACTGGAAACCAAAATCACCAGCAATAAACCGCTGGATCTGGTGTGGGACGGCGAACTGCTGGAAAAACTGGAAGCGAAAGAAGGGAAACCGCTTTCCGATAAAACCATTGCTGGCGAATACCCTGACTATCAGCGCAAAATCAGCGCCACCCGTGATGGCCTGAAAGTCACCTTTGGCAAAGTGCGCGCCACCTGGGATCTGCTGACCTCCGGCGAATCGGAATATCAGGTGCATAAATCCCTGCCGGTGCAGACTGAAATCAACGGTAATCGCTTTACCAGTAAGGCGCATATCAACGGTTCGACCACGCTCTACACCACCTATTCCCATCTGCTGACCGCTCAGGAAGTTAGCAAAGAGCAAATGCAGATCCGCGATATTCTGGCGCGTCCGGCGTTTTATCTCACCGCCTCGCAGCAACGCTGGGAAGAATACCTGAAGAAAGGGTTAACCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCACCGGGCGGTGCGGTGAAATTTAACACCGTTACACCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGATACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGCCAAAGAGAATATCCGCGCGGTCTTCTCCTGGCAGATCCAGCCTGGCGATAGCGTGCGTCCGCAGGATGTGGGCTTTGTCCCCGACCTGATAGCGTGGAACCTTAGCCCCGAGCGTGGTGGCGATGGCGGCAACTGGAACGAACGTAATACCAAACCCAGCCTTGCCGCCTGGTCGGTGATGGAAGTGTATAACGTCACCCAAGATAAAACCTGGGTGGCAGAGATGTACCCGAAACTGGTGGCCTATCACGACTGGTGGTTACGTAACCGCGATCACAACGGCAACGGCGTGCCGGAATATGGCGCGACCCGCGACAAAGCCCACAACACTGAGAGCGGCGAGATGCTGTTTACGGTGAAAAAAGGCGATAAAGAAGAGACGCAGTCTGGGCTGAACAACTACGCCCGCGTGGTGGAGAAAGGCCAGTACGACAGTCTGGAAATTCCGGCACAGGTTGCTGCATCGTGGGAATCGGGGCGTGATGATGCCGCCGTCTTTGGGTTTATCGACAAAGAACAGTTGGATAAATATGTCGCTAATGGCGGCAAACGTAGCGACTGGACGGTGAAATTCGCCGAAAACCGCAGTCAGGACGGAACGTTGCTGGGCTACTCGCTATTGCAGGAGTCGGTGGATCAGGCCAGCTATATGTACAGCGATAACCATTATCTGGCGGAGATGGCAACCATCCTCGGTAAGCCAGAAGAGGCCAAACGCTATCGCCAGTTGGCACAGCAGCTCGCGGACTACATCAACACCTGTATGTTCGACCCGACTACCCAGTTCTACTATGACGTACGTATTGAAGATAAACCACTGGCGAACGGCTGCGCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCGGAAGGCTGGTCGCCGCTGTTTAACGGTGCGGCAACGCAGGCCAATGCCGACGCGGTGGTGAAGGTGATGCTCGATCCTAAAGAGTTCAACACCTTTGTCCCGCTGGGAACGGCGGCGTTAACCAATCCGGCTTTTGGCGCTGATATCTACTGGCGTGGGCGCGTATGGGTGGATCAGTTCTGGTTTGGTCTGAAAGGGATGGAGCGTTACGGTTATCGTGATGATGCCCTGAAGCTGGCGGATACGTTCTTCCGGCACGCCAAAGGGTTAACCGCCGATGGACCAATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAA", - "dna_sequence_length": 2352, - "functions": [ - "alpha-glucosidase" - ], - "id": "CDS_3030", - "location": [ - [ - "NC_000913", - 3228888, - "+", - 2352 - ] - ], - "md5": "fd04c236c6a69a6ab77b5a7a22d1c45e", - "parent_gene": "", - "protein_md5": "22accb0a546c5e0ec3b89f972819ea13", - "protein_translation": "MKIKTILTPVTCALLISFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKITSNKPLDLVWDGELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAHINGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSPGGAVKFNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ", - "protein_translation_length": 783, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12723" - ], - [ - "gene_synonym", - "ygjL" - ], - [ - "gene_synonym", - "ASAP:ABE-0010124" - ], - [ - "gene_synonym", - "b3081" - ], - [ - "gene_synonym", - "ECK3071" - ], - [ - "gene_synonym", - "JW3052" - ], - [ - "gene_synonym", - "NP_417552.1" - ], - [ - "gene_synonym", - "GeneID:947594" - ], - [ - "gene_synonym", - "GI:16130976" - ], - [ - "gene_synonym", - "fadH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42593" - ] - ], - "dna_sequence": "ATGAGCTACCCGTCGCTGTTCGCCCCGCTGGATTTAGGTTTTACCACGTTAAAAAACCGCGTGTTGATGGGCTCAATGCACACCGGGCTGGAGGAATACCCGGACGGTGCCGAGCGGCTGGCAGCGTTTTATGCCGAACGCGCCCGTCACGGCGTGGCGCTGATTGTCAGCGGCGGCATTGCACCAGATTTAACAGGCGTTGGCATGGAAGGTGGCGCAATGCTCAACGACGCCAGCCAGATCCCACACCATCGCACCATTACCGAAGCGGTACATCAGGAAGGCGGCAAAATAGCCCTGCAAATTTTGCATACCGGGCGCTACAGCTACCAACCGCATCTGGTCGCCCCGTCCGCATTGCAGGCCCCCATCAACCGTTTCGTGCCCCATGAGTTAAGCCATGAAGAGATCCTGCAACTGATCGACAATTTCGCCCGCTGCGCGCAACTGGCGCGGGAGGCAGGATACGACGGTGTAGAGGTGATGGGTTCCGAAGGGTATTTGATCAACGAATTTCTGACGCTGCGCACCAATCAGCGTAGTGACCAGTGGGGCGGCGATTACCGCAACCGGATGCGATTTGCCGTAGAAGTAGTGCGTGCGGTGCGCGAACGCGTCGGCAACGACTTCATTATTATCTACCGACTGTCGATGCTCGACCTGGTCGAAGACGGCGGGACTTTTGCCGAAACGGTAGAGCTGGCGCAGGCCATTGAAGCGGCGGGCGCGACCATTATCAACACCGGCATTGGCTGGCATGAAGCACGTATTCCGACCATTGCCACGCCCGTGCCGCGCGGCGCATTTAGCTGGGTCACGCGCAAACTGAAAGGCCACGTCTCGCTGCCGCTGGTAACCACCAACCGGATTAACGATCCGCAGGTTGCCGACGATATTCTCTCGCGCGGCGATGCCGATATGGTATCGATGGCGCGACCGTTTCTTGCTGATGCGGAGCTGCTGTCAAAAGCGCAATCGGGACGAGCCGATGAGATCAACACTTGTATTGGCTGCAATCAGGCCTGTCTCGATCAAATCTTCGTTGGCAAAGTCACCTCGTGCCTGGTGAATCCTCGCGCCTGCCACGAAACCAAAATGCCAATCCTTCCCGCCGTGCAGAAAAAAAATCTGGCGGTGGTCGGTGCGGGACCTGCTGGGCTGGCGTTTGCCATTAACGCGGCGGCGCGTGGGCATCAGGTAACATTGTTTGACGCTCATAGCGAGATTGGCGGGCAGTTTAATATCGCCAAACAGATCCCCGGCAAAGAGGAGTTTTACGAAACGCTGCGCTATTACCGCCGGATGATCGAAGTGACGGGCGTGACGCTAAAACTCAATCACACCGTGACGGCGGATCAGTTACAGGCTTTCGATGAAACGATCCTCGCCAGTGGGATCGTGCCGCGCACTCCGCCCATCGACGGGATCGATCATCCGAAGGTATTGAGTTATCTCGATGTACTGCGCGACAAAGCGCCGGTTGGCAACAAAGTTGCCATCATCGGTTGTGGCGGGATTGGTTTTGATACGGCGATGTATTTAAGTCAGCCGGGCGAATCCACCAGCCAGAATATCGCCGGGTTCTGTAATGAATGGGGGATCGACAGTAGCCTACAACAGGCTGGTGGCTTAAGCCCGCAGGGAATGCAGATCCCCCGTAGCCCACGGCAGATTGTGATGCTCCAGCGCAAAGCCAGCAAACCAGGACAGGGGTTAGGCAAAACCACCGGCTGGATCCATCGCACCACCCTGCTCTCGCGGGGTGTGAAAATGATCCCAGGCGTAAGTTATCAGAAGATTGACGATGACGGGCTGCATGTGGTGATCAACGGCGAAACGCAGGTATTAGCAGTGGACAATGTGGTGATCTGCGCAGGGCAAGAGCCAAACCGCGCGCTGGCGCAACCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTGCCCAGGGAACACGGCTGGCGCTGGAGATTTAA", - "dna_sequence_length": 2019, - "functions": [ - "2,4-dienoyl-CoA reductase, NADH and FMN-linked" - ], - "id": "CDS_3031", - "location": [ - [ - "NC_000913", - 3231665, - "+", - 2019 - ] - ], - "md5": "dcb4c0ca731c9b5ee8e57a73ba7d2e8c", - "parent_gene": "", - "protein_md5": "2afeca3cbb17b27e3b293646b2d8ece8", - "protein_translation": "MSYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTADQLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPNRALAQPLIDSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI", - "protein_translation_length": 672, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygjM" - ], - [ - "gene_synonym", - "ASAP:ABE-0010126" - ], - [ - "gene_synonym", - "EcoGene:EG12724" - ], - [ - "gene_synonym", - "b3082" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67701" - ], - [ - "gene_synonym", - "ECK3072" - ], - [ - "gene_synonym", - "GeneID:947593" - ], - [ - "gene_synonym", - "NP_417553.1" - ], - [ - "gene_synonym", - "JW3053" - ], - [ - "gene_synonym", - "higA" - ], - [ - "gene_synonym", - "GI:16130977" - ] - ], - "dna_sequence": "ATGATTGCGATTGCCGACATCTTGCAAGCAGGAGAAAAGCTAACTGCTGTGGCACCTTTTCTGGCGGGTATTCAGAACGAGGAACAATACACCCAGGCGCTGGAACTGGTAGATCATCTGCTGCTCAACGATCCTGAAAACCCCTTGCTGGATCTGGTGTGTGCCAAAATAACCGCGTGGGAAGAATCAGCGCCCGAATTTGCGGAATTTAATGCCATGGCTCAAGCCATGCCTGGCGGTATAGCCGTGATTCGTACCCTTATGGATCAATATGGTTTAACCCTTTCCGATCTGCCGGAAATTGGCAGTAAATCTATGGTGTCACGCGTTTTGAGCGGGAAGAGGAAATTAACGCTGGAACACGCTAAAAAATTGGCAACGCGATTCGGCATTTCTCCCGCCTTGTTTATTGATTAA", - "dna_sequence_length": 417, - "functions": [ - "antitoxinof the HigB-HigA toxin-antitoxin system" - ], - "id": "CDS_3032", - "location": [ - [ - "NC_000913", - 3234144, - "-", - 417 - ] - ], - "md5": "81181b6e21249909808f2b55be2d54a6", - "parent_gene": "", - "protein_md5": "46394d8005da3d75cb3a9c4665a02bdc", - "protein_translation": "MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID", - "protein_translation_length": 138, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygjN" - ], - [ - "gene_synonym", - "NP_417554.1" - ], - [ - "gene_synonym", - "EcoGene:EG12725" - ], - [ - "gene_synonym", - "b3083" - ], - [ - "gene_synonym", - "ASAP:ABE-0010128" - ], - [ - "gene_synonym", - "ECK3073" - ], - [ - "gene_synonym", - "GeneID:947591" - ], - [ - "gene_synonym", - "GI:16130978" - ], - [ - "gene_synonym", - "JW3054" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64578" - ], - [ - "gene_synonym", - "higB" - ] - ], - "dna_sequence": "ATGCACCTGATAACTCAAAAAGCATTGAAAGATGCTGCGGAAAAATACCCGCAACATAAAACGGAGTTGGTGGCTCTGGGGAACACGATTGCTAAGGGATATTTCAAAAAACCTGAGTCATTAAAAGCAGTATTCCCATCTCTGGATAACTTCAAATATCTGGATAAGCATTATGTTTTCAATGTTGGGGGCAATGAATTACGTGTTGTAGCAATGGTCTTTTTTGAATCGCAAAAGTGCTACATACGTGAAGTTATGACGCATAAAGAATACGATTTCTTTACCGCTGTTCATCGTACTAAGGGGAAAAAATGA", - "dna_sequence_length": 315, - "functions": [ - "mRNA interferase toxin of the HigB-HigA toxin-antitoxin system" - ], - "id": "CDS_3033", - "location": [ - [ - "NC_000913", - 3234455, - "-", - 315 - ] - ], - "md5": "8c04f8d4db1125f5100972a8c2fe27fb", - "parent_gene": "", - "protein_md5": "29c05b8702cd93fa00920db899d0db99", - "protein_translation": "MHLITQKALKDAAEKYPQHKTELVALGNTIAKGYFKKPESLKAVFPSLDNFKYLDKHYVFNVGGNELRVVAMVFFESQKCYIREVMTHKEYDFFTAVHRTKGKK", - "protein_translation_length": 104, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ygjO" - ], - [ - "gene_synonym", - "NP_417555.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0010133" - ], - [ - "gene_synonym", - "rsmD" - ], - [ - "gene_synonym", - "ECK3074" - ], - [ - "gene_synonym", - "rlmG" - ], - [ - "gene_synonym", - "b3084" - ], - [ - "gene_synonym", - "JW5513" - ], - [ - "gene_synonym", - "GI:90111535" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42596" - ], - [ - "gene_synonym", - "GeneID:947589" - ], - [ - "gene_synonym", - "EcoGene:EG12726" - ] - ], - "dna_sequence": "ATGAGCCACTTAGACAACGGTTTCCGTTCACTGACACTACAACGTTTTCCGGCGACGGATGACGTTAACCCGCTACAGGCGTGGGAAGCGGCGGATGAATATTTGCTGCAACAGTTGGACGACACAGAAATCCGCGGCCCGGTGTTGATCCTGAATGATGCCTTTGGTGCGTTAAGCTGCGCACTGGCGGAACATAAGCCGTACAGCATTGGCGACTCATACATCAGTGAACTGGCGACGCGCGAGAATTTACGCCTCAACGGGATTGATGAGTCGAGCGTGAAGTTTCTCGACAGCACCGCCGACTACCCGCAACAGCCGGGTGTGGTGCTGATCAAAGTGCCGAAAACACTGGCATTGCTGGAACAGCAACTGCGTGCGCTGCGCAAAGTGGTCACGTCGGATACACGTATTATTGCCGGTGCCAAGGCCCGTGACATTCACACTTCCACGCTGGAACTGTTCGAAAAAGTGCTCGGCCCAACCACCACCACGCTGGCATGGAAAAAAGCGCGCCTGATTAATTGCACTTTCAATGAACCGCAGCTGGCCGATGCGCCGCAGACCGTTAGCTGGAAGCTGGAAGGTACTGACTGGACTATCCACAACCATGCGAATGTCTTCTCCCGCACCGGGCTTGATATCGGCGCGCGCTTCTTTATGCAACATCTGCCAGAGAATCTCGAAGGGGAGATTGTCGATCTCGGTTGCGGTAATGGCGTTATTGGTCTGACGCTGCTTGATAAAAACCCGCAGGCGAAAGTGGTGTTTGTCGATGAATCGCCGATGGCGGTTGCTTCCAGCCGTTTGAACGTTGAAACCAACATGCCAGAGGCGTTGGATCGCTGCGAGTTTATGATCAACAACGCGCTCTCCGGCGTGGAGCCTTTCCGCTTTAATGCTGTGCTCTGCAACCCGCCGTTTCACCAACAACATGCGCTGACCGATAACGTCGCCTGGGAGATGTTCCACCACGCCCGCCGCTGCCTGAAAATCAACGGCGAGCTGTATATCGTTGCCAACCGTCACCTGGATTACTTCCATAAACTGAAGAAGATTTTCGGCAACTGCACCACTATTGCGACGAATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAA", - "dna_sequence_length": 1137, - "functions": [ - "23S rRNA m(2)G1835 methyltransferase, SAM-dependent" - ], - "id": "CDS_3034", - "location": [ - [ - "NC_000913", - 3235875, - "-", - 1137 - ] - ], - "md5": "e253abf0c9bb2cb09ab21692f9fe69ff", - "parent_gene": "", - "protein_md5": "4b7adc514f3ad659020561040ab198f2", - "protein_translation": "MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEIRGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFNEPQLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR", - "protein_translation_length": 378, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12727" - ], - [ - "gene_synonym", - "ECK3075" - ], - [ - "gene_synonym", - "GI:90111536" - ], - [ - "gene_synonym", - "b3085" - ], - [ - "gene_synonym", - "NP_417556.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0010138" - ], - [ - "gene_synonym", - "JW5514" - ], - [ - "gene_synonym", - "GeneID:947650" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42597" - ], - [ - "gene_synonym", - "ygjP" - ] - ], - "dna_sequence": "ATGAGCAATCTTACTTATCTTCAGGGTTATCCCGAGCAGCTACTTTCCCAGGTGCGAACACTGATTAACGAACAGCGTCTGGGCGATGTGCTGGCAAAACGCTATCCGGGAACACACGACTACGCCACCGATAAAGCCCTCTGGCAATATACTCAGGATCTGAAAAATCAGTTTCTGCGTAATGCCCCGCCGATCAATAAAGTGATGTATGACAATAAGATCCATGTGCTAAAAAACGCGCTCGGGTTACATACCGCTGTTTCTCGTGTGCAGGGCGGCAAGCTGAAAGCAAAGGTGGAGATCCGCGTCGCTACCGTGTTTCGCAACGCGCCGGAACCGTTTTTGCGCATGATCGTGGTGCACGAGCTGGCGCACCTGAAGGAGAAAGAGCATAACAAAGCGTTTTACCAGTTGTGTTGTCATATGGAACCCCAGTACCACCAGCTTGAGTTCGACACCCGACTGTGGCTAACGCAGTTGTCGCTTGGGCAGAACAAAATCTGA", - "dna_sequence_length": 504, - "functions": [ - "putative metal dependent hydrolase" - ], - "id": "CDS_3035", - "location": [ - [ - "NC_000913", - 3235960, - "+", - 504 - ] - ], - "md5": "6442f65522780605ee768afadbb715cb", - "parent_gene": "", - "protein_md5": "e11ec548a79753999e550101197c400f", - "protein_translation": "MSNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATDKALWQYTQDLKNQFLRNAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKVEIRVATVFRNAPEPFLRMIVVHELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQLSLGQNKI", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3076" - ], - [ - "gene_synonym", - "EcoGene:EG12728" - ], - [ - "gene_synonym", - "b3086" - ], - [ - "gene_synonym", - "ASAP:ABE-0010142" - ], - [ - "gene_synonym", - "NP_417557.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42598" - ], - [ - "gene_synonym", - "JW3057" - ], - [ - "gene_synonym", - "GeneID:947598" - ], - [ - "gene_synonym", - "GI:16130981" - ], - [ - "gene_synonym", - "ygjQ" - ] - ], - "dna_sequence": "ATGCTGCGCGCATTTGCCCGCCTTCTTCTCCGTATTTGTTTTTCTCGCCGGACTCTAAAGATTGCCTGCTTACTGTTACTTGTGGCAGGAGCGACCATCCTTATCGCCGATCGCGTAATGGTCAACGCCAGCAAACAGCTGACCTGGAGCGATGTCAACGCCGTTCCGGCGCGTAACGTGGGTTTATTGCTGGGGGCGAGGCCGGGTAATCGCTACTTTACCCGACGTATTGATACCGCAGCAGCGTTGTACCACGCCGGAAAAGTGAAATGGCTGCTGGTAAGTGGCGATAACGGACGTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTGCCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTCAACTGCGGGAGAAACTCGCTCGTGTCAGCGCCGTGATTGACGCCAAAATCCTCCATCGCCAGCCGAAATATCTCGGGCCTTCGGTCATGATTGGGCCGTTTAGTGAGCATGGCTGTCCGGCGCAGAAATAA", - "dna_sequence_length": 693, - "functions": [ - "DUF218 superfamily protein" - ], - "id": "CDS_3036", - "location": [ - [ - "NC_000913", - 3236540, - "+", - 693 - ] - ], - "md5": "166aaa4b54e8be0df769456c50f15a7c", - "parent_gene": "", - "protein_md5": "04c481f17b924655e766588a3afcc79c", - "protein_translation": "MLRAFARLLLRICFSRRTLKIACLLLLVAGATILIADRVMVNASKQLTWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDEASGMQQALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWLAKQYGIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHRQPKYLGPSVMIGPFSEHGCPAQK", - "protein_translation_length": 230, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:145698311" - ], - [ - "gene_synonym", - "NP_417558.2" - ], - [ - "gene_synonym", - "EcoGene:EG12729" - ], - [ - "gene_synonym", - "ECK3077" - ], - [ - "gene_synonym", - "b3087" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42599" - ], - [ - "gene_synonym", - "ASAP:ABE-0010148" - ], - [ - "gene_synonym", - "JW3058" - ], - [ - "gene_synonym", - "ygjR" - ], - [ - "gene_synonym", - "GeneID:947600" - ] - ], - "dna_sequence": "ATGATACGTTTCGCTGTGATTGGTACGAACTGGATCACTCGCCAGTTCGTCGAGGCCGCCCATGAGAGCGGTAAATACAAGTTAACCGCCGTATATTCCCGCAGCCTTGAACAGGCCCAGCACTTCGCCAATGATTTTTCTGTCGAGCATCTGTTTACCTCGCTGGAAGCGATGGCGGAAAGCGATGCCATTGACGCGGTGTATATTGCCAGCCCGAATTCCCTGCATTTTTCCCAGACACAACTTTTCCTTAGCCATAAAATTAATGTGATTTGCGAGAAACCGCTGGCGTCGAATCTGGCGGAAGTGGATGCCGCCATTGCCTGTGCGCGGGAAAATCAGGTGGTGCTGTTTGAGGCATTTAAAACCGCCTGCCTGCCGAACTTTCATTTGTTGCGCCAGGCGCTGCCGAAAGTCGGCAAACTGCGGAAAGTCTTTTTCAACTATTGCCAGTATTCCTCGCGGTATCAACGTTACCTGGATGGTGAGAATCCCAACACCTTTAATCCGGCATTCTCTAACGGTTCAATTATGGATATCGGTTTTTACTGTCTGGCGTCGGCGGTGGCGTTATTTGGTGAGCCGAAAAGCGTGCAGGCAACCGCCAGTTTGCTGGCAAGCGGCGTTGACGCCCAGGGCGTGGTGGTGATGGATTACGGTGATTTCAGCGTCACCTTGCAGCACTCAAAAGTCAGTGATTCTGTCCTGGCGAGCGAGATTCAGGGCGAAGCAGGATCGCTGGTGATTGAAAAACTGTCTGAATGCCAGAAAGTGTGCTTCGTGCCGCGTGGCAGCCAAATGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAA", - "dna_sequence_length": 987, - "functions": [ - "putative NAD(P)-dependent dehydrogenase" - ], - "id": "CDS_3037", - "location": [ - [ - "NC_000913", - 3237311, - "+", - 987 - ] - ], - "md5": "1ac6b74706e8a9cba02ac096f9fa40ff", - "parent_gene": "", - "protein_md5": "25aacea418fe48b72817a73403749874", - "protein_translation": "MIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNSLHFSQTQLFLSHKINVICEKPLASNLAEVDAAIACARENQVVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAQGVVVMDYGDFSVTLQHSKVSDSVLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL", - "protein_translation_length": 328, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12731" - ], - [ - "gene_synonym", - "b3088" - ], - [ - "gene_synonym", - "ECK3079" - ], - [ - "gene_synonym", - "YP_026201.1" - ], - [ - "gene_synonym", - "GI:49176311" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42601" - ], - [ - "gene_synonym", - "ASAP:ABE-0010151" - ], - [ - "gene_synonym", - "alx" - ], - [ - "gene_synonym", - "JW5515" - ], - [ - "gene_synonym", - "GeneID:947607" - ], - [ - "gene_synonym", - "ygjT" - ] - ], - "dna_sequence": "ATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACCATGAAACAGGCTGCGGCCTGGTCGCTGGTCTGGGTGACGCTGTCGTTACTGTTTAACGCCGCTTTCTGGTGGTATCTGGTGCAAACCGAAGGTCGCGCCGTTGCCGATCCACAGGCACTGGCCTTTCTCACAGGTTATCTGATTGAGAAATCGCTGGCGGTCGATAACGTCTTTGTCTGGCTGATGTTGTTCAGCTATTTCTCTGTTCCGGCGGCATTACAACGCCGCGTGCTGGTGTATGGCGTGCTCGGGGCGATTGTTCTGCGTACCATCATGATCTTCACTGGCAGCTGGCTAATTTCGCAGTTCGACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTACTGATTCTGGTGGAATTGAGCGACGTGATTTTCGCCGTGGATAGCATTCCGGCTATCTTCGCCGTGACCACTGACCCGTTCATTGTGCTGACCTCAAACCTGTTTGCGATCCTCGGCCTGCGTGCGATGTATTTCCTGCTGGCGGGCGTAGCAGAGCGTTTCTCGATGCTCAAATATGGCCTGGCGGTGATTCTGGTGTTTATCGGTATCAAGATGCTGATTGTCGACTTCTACCATATTCCAATCGCCGTCTCGCTGGGCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAA", - "dna_sequence_length": 966, - "functions": [ - "putative membrane-bound redox modulator" - ], - "id": "CDS_3038", - "location": [ - [ - "NC_000913", - 3238580, - "+", - 966 - ] - ], - "md5": "6c0192b099ba0ca95032d900dc4a0ce8", - "parent_gene": "", - "protein_md5": "24c4f8cab04028b26f3c946b6acbbb3d", - "protein_translation": "MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAWSLVWVTLSLLFNAAFWWYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFIGIKMLIVDFYHIPIAVSLGVVFGILVMTFIINAWVNYRHDKQRGG", - "protein_translation_length": 321, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGE4" - ], - [ - "gene_synonym", - "b3089" - ], - [ - "gene_synonym", - "ECK3080" - ], - [ - "gene_synonym", - "NP_417560.1" - ], - [ - "gene_synonym", - "EcoGene:EG12732" - ], - [ - "gene_synonym", - "sstT" - ], - [ - "gene_synonym", - "GI:16130984" - ], - [ - "gene_synonym", - "ASAP:ABE-0010159" - ], - [ - "gene_synonym", - "ygjU" - ], - [ - "gene_synonym", - "JW3060" - ], - [ - "gene_synonym", - "GeneID:947605" - ] - ], - "dna_sequence": "ATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATGGATCTCAAAACCCGCGGCGGAAGCTGTTGGTCTGTTAGGTACTTTGTTCGTCGGCGCACTGAAAGCCGTTGCCCCCATCCTGGTGTTGATGCTGGTGATGGCATCTATTGCTAACCACCAGCACGGGCAGAAAACCAATATCCGCCCTATTTTGTTCCTCTATCTACTGGGCACCTTCTCTGCTGCTCTGGCCGCAGTAGTCTTCAGCTTTGCCTTCCCTTCTACCCTGCATTTATCCAGTAGCGCGGGTGATATTTCGCCGCCGTCAGGCATTGTCGAAGTGATGCGCGGGCTGGTAATGAGCATGGTTTCCAACCCCATCGACGCGCTGCTGAAAGGTAACTACATCGGGATTCTGGTGTGGGCGATCGGCCTCGGCTTCGCACTGCGTCACGGTAACGAGACCACCAAAAACCTGGTTAACGATATGTCGAATGCCGTTACCTTTATGGTGAAACTGGTCATTCGCTTCGCACCGATTGGTATTTTTGGGCTGGTTTCTTCTACCCTGGCAACCACCGGTTTCTCCACACTGTGGGGCTACGCGCAACTGCTGGTCGTGCTGGTTGGCTGTATGTTACTGGTGGCGCTGGTGGTTAACCCATTGCTGGTGTGGTGGAAAATTCGTCGTAACCCGTTCCCGCTGGTGCTGCTGTGCCTGCGCGAAAGCGGTGTGTATGCCTTCTTCACCCGCAGCTCTGCAGCGAACATTCCGGTGAATATGGCGCTGTGTGAAAAGCTGAATCTGGATCGCGATACCTATTCCGTTTCTATTCCGCTGGGAGCCACCATCAATATGGCGGGCGCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P42603" - ], - [ - "gene_synonym", - "EcoGene:EG12733" - ], - [ - "gene_synonym", - "ASAP:ABE-0010161" - ], - [ - "gene_synonym", - "ygjV" - ], - [ - "gene_synonym", - "GeneID:947604" - ], - [ - "gene_synonym", - "JW3061" - ] - ], - "dna_sequence": "ATGACCGCGTATTGGCTGGCCCAGGGCGTGGGTGTCATCGCCTTTCTGATTGGTATCACAACATTTTTCAATCGTGACGAACGTCGCTTCAAAAAGCAGCTTTCGGTCTATAGCGCCGTTATTGGCGTACATTTTTTTCTTCTGGGCACCTATCCCGCTGGTGCCAGTGCCATCCTTAATGCCATTCGTACATTGATTACCTTACGCACGCGCAGCTTATGGGTAATGGCGATTTTTATTGTGCTGACTGGCGGAATTGGCCTCGCGAAGTTCCATCATCCTGTCGAACTATTGCCGGTTATCGGCACGATTGTCAGTACCTGGGCGCTATTCTGCTGTAAAGGGCTGACCATGCGCTGCGTAATGTGGTTTTCAACGTGTTGCTGGGTGATTCACAACTTCTGGGCGGGGTCGATAGGCGGCACGATGATTGAGGGTAGTTTTCTGCTTATGAATGGCCTGAATATCATTCGTTTCTGGCGGATGCAGAAAAGGGGAATTGATCCGTTTAAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTAA", - "dna_sequence_length": 552, - "functions": [ - "Imp-YgjV family inner membrane protein" - ], - "id": "CDS_3040", - "location": [ - [ - "NC_000913", - 3241744, - "-", - 552 - ] - ], - "md5": "e6879ba45c58ca299763f01ac8d54871", - "parent_gene": "", - "protein_md5": "bf0a6dad265624be60176502562e7cfe", - "protein_translation": "MTAYWLAQGVGVIAFLIGITTFFNRDERRFKKQLSVYSAVIGVHFFLLGTYPAGASAILNAIRTLITLRTRSLWVMAIFIVLTGGIGLAKFHHPVELLPVIGTIVSTWALFCCKGLTMRCVMWFSTCCWVIHNFWAGSIGGTMIEGSFLLMNGLNIIRFWRMQKRGIDPFKVEKTPSAVDERG", - "protein_translation_length": 183, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12734" - ], - [ - "gene_synonym", - "ECK3082" - ], - [ - "gene_synonym", - "b3091" - ], - [ - "gene_synonym", - "ASAP:ABE-0010164" - ], - [ - "gene_synonym", - "NP_417562.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42604" - ], - [ - "gene_synonym", - "ygjW" - ], - [ - "gene_synonym", - "uxaA" - ], - [ - "gene_synonym", - "GI:16130986" - ], - [ - "gene_synonym", - "GeneID:947603" - ], - [ - "gene_synonym", - "JW3062" - ] - ], - "dna_sequence": "ATGCAATACATCAAGATCCATGCGCTGGATAACGTCGCGGTCGCTTTAGCAGATTTGGCTGAAGGCACAGAAGTCAGTGTCGATAACCAGACTGTTACGCTGCGCCAGGATGTTGCTCGTGGACATAAATTTGCGTTAACGGATATCGCAAAAGGGGCCAATGTCATCAAATATGGCCTGCCGATTGGTTATGCATTGGCGGATATTGCGGCAGGTGTTCACGTTCACGCCCACAATACGCGCACGAATCTGAGCGATCTGGATCAGTATCGCTATCAACCTGATTTTCAGGATCTGCCTGCGCAAGCGGCAGATCGTGAAGTGCAGATCTATCGTCGCGCTAACGGCGATGTCGGGGTGCGTAATGAGCTGTGGATCCTGCCAACCGTGGGCTGTGTCAACGGCATCGCGCGGCAGATCCAGAACCGTTTTCTGAAAGAGACCAACAACGCCGAAGGTACTGACGGCGTGTTCCTCTTCAGCCACACCTACGGCTGCTCACAGCTGGGCGACGATCACATTAATACCCGCACCATGCTGCAAAACATGGTGCGCCACCCGAACGCAGGCGCAGTGCTGGTGATTGGTCTGGGCTGTGAAAACAACCAGGTTGCCGCATTCCGTGAAACGCTGGGCGATATCGATCCTGAACGCGTTCATTTCATGATCTGCCAACAGCAGGATGATGAGATCGAAGCCGGAATCGAGCATTTGCATCAGCTGTATAACGTGATGCGCAACGATAAACGCGAGCCAGGCAAACTCAGCGAACTGAAGTTTGGTCTGGAGTGCGGTGGTTCTGACGGTCTTTCTGGTATTACTGCTAACCCGATGCTGGGGCGTTTCTCTGACTACGTGATTGCTAACGGCGGTACTACCGTACTGACCGAAGTGCCGGAGATGTTTGGCGCAGAGCAGTTGCTGATGGACCATTGCCGCGACGAAGCAACGTTTGAAAAACTGGTCACCATGGTCAACGACTTCAAACAGTACTTTATTGCCCATGATCAGCCGATCTATGAAAACCCATCGCCGGGGAACAAAGCGGGCGGTATCACCACGCTGGAAGACAAATCACTTGGCTGTACCCAGAAAGCGGGTTCCAGCGTCGTGGTTGACGTGCTGCGTTACGGCGAGCGTCTGAAAACGCCAGGGCTGAACTTGTTAAGTGCGCCGGGTAACGATGCCGTAGCGACCAGCGCCCTGGCGGGTGCGGGCTGCCATATGGTGCTGTTCAGTACTGGTCGTGGCACGCCGTATGGTGGATTTGTGCCGACGGTGAAAATCGCCACCAACAGTGAACTGGCGGCGAAGAAAAAACACTGGATCGACTTTGACGCGGGTCAGTTGATCCACGGTAAAGCGATGCCGCAGTTGCTGGAAGAATTTATCGACACCATCGTTGAGTTTGCCAACGGTAAGCAAACCTGTAACGAGCGTAACGACTTCCGCGAACTGGCGATCTTCAAAAGCGGCGTAACGCTATAA", - "dna_sequence_length": 1488, - "functions": [ - "altronate hydrolase" - ], - "id": "CDS_3041", - "location": [ - [ - "NC_000913", - 3243314, - "-", - 1488 - ] - ], - "md5": "b076962fa126cfe040d7d522f45dd382", - "parent_gene": "", - "protein_md5": "cc63ccb0cace0874f345f5025aa13d41", - "protein_translation": "MQYIKIHALDNVAVALADLAEGTEVSVDNQTVTLRQDVARGHKFALTDIAKGANVIKYGLPIGYALADIAAGVHVHAHNTRTNLSDLDQYRYQPDFQDLPAQAADREVQIYRRANGDVGVRNELWILPTVGCVNGIARQIQNRFLKETNNAEGTDGVFLFSHTYGCSQLGDDHINTRTMLQNMVRHPNAGAVLVIGLGCENNQVAAFRETLGDIDPERVHFMICQQQDDEIEAGIEHLHQLYNVMRNDKREPGKLSELKFGLECGGSDGLSGITANPMLGRFSDYVIANGGTTVLTEVPEMFGAEQLLMDHCRDEATFEKLVTMVNDFKQYFIAHDQPIYENPSPGNKAGGITTLEDKSLGCTQKAGSSVVVDVLRYGERLKTPGLNLLSAPGNDAVATSALAGAGCHMVLFSTGRGTPYGGFVPTVKIATNSELAAKKKHWIDFDAGQLIHGKAMPQLLEEFIDTIVEFANGKQTCNERNDFRELAIFKSGVTL", - "protein_translation_length": 495, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3083" - ], - [ - "gene_synonym", - "ASAP:ABE-0010167" - ], - [ - "gene_synonym", - "b3092" - ], - [ - "gene_synonym", - "NP_417563.1" - ], - [ - "gene_synonym", - "ygjZ" - ], - [ - "gene_synonym", - "ygjX" - ], - [ - "gene_synonym", - "ygjY" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8G3" - ], - [ - "gene_synonym", - "GI:16130987" - ], - [ - "gene_synonym", - "uxaC" - ], - [ - "gene_synonym", - "EcoGene:EG12737" - ], - [ - "gene_synonym", - "GeneID:947599" - ], - [ - "gene_synonym", - "JW3063" - ] - ], - "dna_sequence": "ATGACTCCGTTTATGACTGAAGATTTCCTGTTAGATACCGAATTTGCCCGCCGTCTGTATCACGACTACGCAAAAGACCAGCCGATTTTCGATTACCATTGCCATTTGCCGCCGCAGCAGATTGCGGAAGACTATCGTTTTAAAAACCTGTATGACATCTGGCTGAAAGGCGATCACTACAAATGGCGCGCTATGCGTACCAACGGTGTGGCCGAGCGTCTGTGTACCGGTGATGCGTCTGACCGTGAAAAATTTGACGCCTGGGCGGCGACTGTTCCGCACACTATCGGCAACCCGTTATACCACTGGACGCACCTCGAACTGCGCCGTCCGTTTGGTATCACTGGCAAATTGCTTTCTCCGTCAACTGCCGATGAAATCTGGAACGAATGTAACGAACTGCTGGCGCAGGATAACTTCTCCGCGCGCGGCATCATGCAGCAGATGAACGTGAAAATGGTCGGCACCACCGATGACCCGATCGATTCTCTGGAGCATCACGCAGAGATCGCCAAAGACGGCTCTTTCACCATCAAAGTGCTGCCGAGCTGGCGTCCGGACAAAGCCTTCAACATCGAACAGGCGACCTTTAACGACTACATGGCGAAGCTGGGCGAAGTTTCCGATACCGACATTCGCCGCTTTGCTGACCTGCAAACTGCCCTGACCAAACGTCTGGATCACTTCGCCGCTCACGGCTGTAAAGTGTCTGACCACGCGCTGGATGTGGTGATGTTTGCTGAAGCGAACGAAGCGGAACTGGACAGCATTCTGGCGCGCCGTCTGGCTGGCGAAACCCTGAGCGAGCACGAAGTGGCGCAGTTCAAAACTGCGGTACTGGTGTTCCTTGGTGCCGAATATGCACGTCGCGGCTGGGTACAGCAGTACCACATTGGCGCGCTGCGTAATAACAACCTGCGTCAGTTCAAACTGCTGGGGCCGGATGTAGGCTTTGACTCCATCAACGACCGTCCGATGGCGGAAGAGCTGTCTAAGTTGCTGAGCAAGCAGAATGAAGAAAACCTGCTGCCGAAAACCATTCTGTACTGCCTGAACCCGCGCGATAACGAAGTGCTGGGCACCATGATCGGTAACTTCCAGGGCGAAGGTATGCCGGGCAAAATGCAGTTCGGTTCCGGCTGGTGGTTTAACGATCAGAAAGACGGTATGGAACGTCAGATGACCCAACTGGCGCAGCTCGGTCTGCTGAGCCGCTTTGTCGGTATGCTGACTGACAGCCGTAGCTTCCTGTCATACACCCGTCACGAATACTTCCGCCGCATTCTGTGCCAGATGATCGGTCGCTGGGTGGAAGCGGGCGAAGCACCGGCGGACATCAACCTGCTGGGCGAGATGGTGAAAAATATTTGCTTTAACAATGCGCGTGACTACTTCGCCATTGAACTGAACTAA", 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"gene_synonym", - "b3093" - ], - [ - "gene_synonym", - "GI:674842734" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA78" - ], - [ - "gene_synonym", - "ASAP:ABE-0010171" - ], - [ - "gene_synonym", - "JW3064" - ], - [ - "gene_synonym", - "NP_417564.2" - ], - [ - "gene_synonym", - "GeneID:947601" - ] - ], - "dna_sequence": 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"gene_synonym", - "GI:90111537" - ], - [ - "gene_synonym", - "b3094" - ], - [ - "gene_synonym", - "JW3065" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACL2" - ], - [ - "gene_synonym", - "GeneID:947602" - ], - [ - "gene_synonym", - "ASAP:ABE-0010176" - ] - ], - "dna_sequence": "ATGGAAATCACTGAACCACGCCGTTTGTATCAACAACTTGCCGCTGACCTGAAAGAGCGCATCGAACAGGGCGTCTATCTGGTGGGTGATAAACTGCCTGCAGAACGCTTTATTGCCGATGAAAAGAACGTCAGCCGTACGGTAGTTCGTGAAGCCATCATCATGCTGGAAGTTGAAGGCTATGTCGAAGTGCGTAAAGGTTCAGGTATTCATGTGGTTTCCAACCAGCCGCGCCATCAGCAGGCGGCTGACAATAATATGGAATTCGCCAATTACGGTCCGTTTGAGTTGCTTCAGGCTCGCCAGCTCATCGAAAGTAATATTGCCGAATTCGCGGCAACTCAGGTAACGAAACAGGACATCATGAAACTGATGGCCATTCAGGAACAGGCGCGCGGCGAACAATGCTTCCGTGATTCCGAGTGGGATTTGCAGTTCCACATTCAGGTCGCTCTGGCGACGCAGAACTCCGCCCTGGCGGCTATCGTGGAAAAAATGTGGACCCAGCGTAGTCATAACCCGTACTGGAAAAAACTGCACGAACACATTGATTCCCGTACCGTCGATAACTGGTGTGATGACCACGATCAAATCCTCAAGGCGCTGATTCGCAAAGATCCTCATGCTGCTAAGCTGGCAATGTGGCAGCATCTGGAAAACACCAAGATCATGTTATTTAACGAAACCAGCGACGACTTCGAGTTCAATGCCGACCGCTATCTATTCGCCGAAAACCCGGTGGTGCATCTCGATACAGCCACCAGCGGCAGTAAATGA", - "dna_sequence_length": 777, - "functions": [ - "hexuronate regulon transcriptional repressor", - "autorepressor" - ], - "id": "CDS_3044", - "location": [ - [ - "NC_000913", - 3246652, - "+", - 777 - ] - ], - "md5": "e0109bfec5f9cbb9a61215a7ef9f850c", - "parent_gene": "", - "protein_md5": "022fb3f73dae00ef40aaa4e42ab852b8", - "protein_translation": "MEITEPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVEVRKGSGIHVVSNQPRHQQAADNNMEFANYGPFELLQARQLIESNIAEFAATQVTKQDIMKLMAIQEQARGEQCFRDSEWDLQFHIQVALATQNSALAAIVEKMWTQRSHNPYWKKLHEHIDSRTVDNWCDDHDQILKALIRKDPHAAKLAMWQHLENTKIMLFNETSDDFEFNADRYLFAENPVVHLDTATSGSK", - "protein_translation_length": 258, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA63" - ], - [ - "gene_synonym", - "ECK3086" - ], - [ - "gene_synonym", - "NP_417566.1" - ], - [ - "gene_synonym", - "yqjA" - ], - [ - "gene_synonym", - "b3095" - ], - [ - "gene_synonym", - "ecfL" - ], - [ - "gene_synonym", - "GeneID:947643" - ], - [ - "gene_synonym", - "GI:16130990" - ], - [ - "gene_synonym", - "ASAP:ABE-0010181" - ], - [ - "gene_synonym", - "EcoGene:EG12740" - ], - [ - "gene_synonym", - "JW3066" - ] - ], - "dna_sequence": "ATGGAACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACAGTTTACTGGTATTGGTCGGCGTGTTGATTGCGAAAGGCGCGATGGGCTATCCGCAAACGATTCTGCTGCTGACCGTTGCCGCCAGCCTCGGCTGCTGGGTCAGCTATATTCAGGGGCGATGGCTGGGCAATACCCGCACCGTACAAAACTGGCTATCTCATTTACCCGCGCATTATCATCAACGCGCACACCATCTTTTTCATAAACACGGTTTATCGGCGCTGTTAATTGGTCGCTTTATTGCGTTTGTCAGAACACTGCTGCCGACGATTGCCGGGTTATCAGGGCTGAATAACGCGCGCTTTCAGTTTTTCAACTGGATGAGCGGTCTGCTGTGGGTATTGATCCTGACAACTCTGGGTTACATGCTCGGCAAAACGCCGGTATTTTTAAAGTACGAGGACCAGCTGATGTCATGCCTGATGCTGCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGTAA", - "dna_sequence_length": 663, - "functions": [ - "general envelope maintenance protein", - "DedA family inner membrane protein", - "putative multidrug efflux transporter" - ], - "id": "CDS_3045", - "location": [ - [ - "NC_000913", - 3247773, - "+", - 663 - ] - ], - "md5": "7002d05aa732fe8f5e547dbc51fface3", - "parent_gene": "", - "protein_md5": "c73ca6950ef645f2f22a23b5c138d8f4", - "protein_translation": "MELLTQLLQALWAQDFETLANPSMIGMLYFVLFVILFLENGLLPAAFLPGDSLLVLVGVLIAKGAMGYPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNWLSHLPAHYHQRAHHLFHKHGLSALLIGRFIAFVRTLLPTIAGLSGLNNARFQFFNWMSGLLWVLILTTLGYMLGKTPVFLKYEDQLMSCLMLLPVVLLVFGLAGSLVVLWKKKYGNRG", - "protein_translation_length": 220, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3096" - ], - [ - "gene_synonym", - "ECK3087" - ], - [ - "gene_synonym", - "EcoGene:EG12741" - ], - [ - "gene_synonym", - "mzrA" - ], - [ - "gene_synonym", - "ecfM" - ], - [ - "gene_synonym", - "GeneID:947619" - ], - [ - "gene_synonym", - "GI:16130991" - ], - [ - "gene_synonym", - "NP_417567.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010183" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42615" - ], - [ - "gene_synonym", - "JW3067" - ], - [ - "gene_synonym", - "yqjB" - ] - ], - "dna_sequence": "ATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGTCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCAATCTGGCATCACCTTGACGCTCATGGCATTCCTTTCAAAAGTATCACCCCCAAAAACGACACTCTGTTAATTACATTTGACTCCAGCGACCAGAGCGCCGCCGCAAAAGCGGTCCTCGACAGAACATTGCCCCATGGCTACATCATTGCGCAGCAGGACAATAACAGTCAGGCTATGCAGTGGCTGACCCGGTTACGGGATAACTCTCATCGCTTCGGATAA", - "dna_sequence_length": 384, - "functions": [ - "modulator of EnvZ/OmpR regulon" - ], - "id": "CDS_3046", - "location": [ - [ - "NC_000913", - 3248439, - "+", - 384 - ] - ], - "md5": "393e3fddd2ea5cc69b7bba02963311f9", - "parent_gene": "", - "protein_md5": "a13c3466ab65d56408638a9d2649c78a", - "protein_translation": "MQIPRMSLRQLAWSGAVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHRFG", - "protein_translation_length": 127, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111538" - ], - [ - "gene_synonym", - "yqjC" - ], - [ - "gene_synonym", - "ECK3088" - ], - [ - "gene_synonym", - "b3097" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42616" - ], - [ - "gene_synonym", - "GeneID:947622" - ], - [ - "gene_synonym", - "JW5516" - ], - [ - "gene_synonym", - "ASAP:ABE-0010188" - ], - [ - "gene_synonym", - "NP_417568.2" - ], - [ - "gene_synonym", - "EcoGene:EG12742" - ] - ], - "dna_sequence": "ATGAAATACCGCATCGCTTTAGCTGTTTCTCTCTTTGCTCTTAGTGCCGGTAGTTATGCCACTACCCTGTGTCAGGAAAAGGAGCAAAATATCCTTAAGGAGATCAGCTATGCCGAAAAACACCAAAACCAGAATCGTATTGACGGTCTGAATAAAGCCCTGAGTGAAGTCCGGGCCAACTGTTCAGATAGCCAGCTGCGTGCCGATCATCAGAAGAAAATCGCAAAGCAGAAAGATGAGGTGGCGGAACGCCAGCAAGATTTAGCCGAGGCGAAGCAAAAAGGCGATGCCGATAAGATTGCCAAACGCGAACGGAAACTGGCAGAAGCGCAGGAAGAGCTGAAAAAGCTGGAAGCGCGCGACTACTAA", - "dna_sequence_length": 369, - "functions": [ - "DUF1090 family putative periplasmic protein" - ], - "id": "CDS_3047", - "location": [ - [ - "NC_000913", - 3248969, - "+", - 369 - ] - ], - "md5": "c2cf26581efb6cca65357e2a4e63d02b", - "parent_gene": "", - "protein_md5": "06d0c04686cf093876a7be5f2128f8f0", - "protein_translation": "MKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQNRIDGLNKALSEVRANCSDSQLRADHQKKIAKQKDEVAERQQDLAEAKQKGDADKIAKRERKLAEAQEELKKLEARDY", - "protein_translation_length": 122, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3098" - ], - [ - "gene_synonym", - "ECK3089" - ], - [ - "gene_synonym", - "EcoGene:EG12743" - ], - [ - "gene_synonym", - "yqjD" - ], - [ - "gene_synonym", - "GI:16130993" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64581" - ], - [ - "gene_synonym", - "JW3069" - ], - [ - "gene_synonym", - "NP_417569.1" - ], - [ - "gene_synonym", - "GeneID:947614" - ], - [ - "gene_synonym", - "ASAP:ABE-0010192" - ] - ], - "dna_sequence": "ATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCTTAGCTCATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCCTGGGTGAAACCGGTGATGCCATTGCCAAACAAACCCGTGTCGCGGCGGCGCGTGCCGATGAGTATGTGCGCGAAAATCCGTGGACGGGCGTGGGCATTGGCGCTGCAATCGGTGTAGTGCTCGGCGTTCTGCTGTCGCGTCGTTAA", - "dna_sequence_length": 306, - "functions": [ - "membrane-anchored ribosome-binding protein" - ], - "id": "CDS_3048", - "location": [ - [ - "NC_000913", - 3249375, - "+", - 306 - ] - ], - "md5": "9ab1672e9e9e962155e6f2fc98389df1", - "parent_gene": "", - "protein_md5": "fa1a4201301f9503dd5d51aa06fb8a10", - "protein_translation": "MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAEQALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR", - "protein_translation_length": 101, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3099" - ], - [ - "gene_synonym", - "ECK3090" - ], - [ - "gene_synonym", - "yqjE" - ], - [ - "gene_synonym", - "EcoGene:EG12744" - ], - [ - "gene_synonym", - "ASAP:ABE-0010195" - ], - [ - "gene_synonym", - "GI:16130994" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64585" - ], - [ - "gene_synonym", - "GeneID:947611" - ], - [ - "gene_synonym", - "JW3070" - ], - [ - "gene_synonym", - "NP_417570.1" - ] - ], - "dna_sequence": "ATGGCGGACACTCATCACGCACAAGGGCCCGGTAAAAGCGTTCTGGGCATCGGGCAGCGAATTGTTTCTATCATGGTTGAAATGGTAGAGACACGTCTGCGGCTGGCGGTGGTGGAGCTGGAAGAGGAAAAAGCGAATCTCTTTCAACTTTTACTGATGCTGGGCCTGACGATGCTTTTCGCTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAA", - "dna_sequence_length": 405, - "functions": [ - "DUF1469 family inner membrane protein" - ], - "id": "CDS_3049", - "location": [ - [ - "NC_000913", - 3249683, - "+", - 405 - ] - ], - "md5": "b94e4e56048e1eae2f2b28fb22845a17", - "parent_gene": "", - "protein_md5": "3fa7e8669f303c3b972b1d59e67a7154", - "protein_translation": "MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEKANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIWTLRKSRKSTLLRHTRHELANDRQLLEEESREQ", - "protein_translation_length": 134, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010197" - ], - [ - "gene_synonym", - "ECK3091" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47710" - ], - [ - "gene_synonym", - "NP_417571.1" - ], - [ - "gene_synonym", - "GeneID:947610" - ], - [ - "gene_synonym", - "yqjK" - ], - [ - "gene_synonym", - "GI:16130995" - ], - [ - "gene_synonym", - "EcoGene:EG14314" - ], - [ - "gene_synonym", - "JW3071" - ], - [ - "gene_synonym", - "b3100" - ] - ], - "dna_sequence": "GTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCTTTCCGCCAGTCGTCGTGAATGGCTGGAGACAACAGGCGCTTACGATCGTCGCTGGAATATGCTGCTAAGTCTGCGCTCCTGGGCGCTGGTTGGCAGTAGCGTGATGGCGATCTGGACGATTCGCCATCCTAATATGCTGGTCCGCTGGGCCAGACGCGGTTTTGGCGTATGGAGCGCCTGGCGTCTGGTTAAAACGACCCTCAAGCAGCAACAGCTTCGCGGTTAA", - "dna_sequence_length": 300, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_3050", - "location": [ - [ - "NC_000913", - 3250077, - "+", - 300 - ] - ], - "md5": "65432858f6ba02443aacd294bdcfeb08", - "parent_gene": "", - "protein_md5": "676460489b514e5a61eeabe12a970d3c", - "protein_translation": "MSSKVERERRKAQLLSQIQQQRLDLSASRREWLETTGAYDRRWNMLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG", - "protein_translation_length": 99, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3092" - ], - [ - "gene_synonym", - "GI:90111539" - ], - [ - "gene_synonym", - "EcoGene:EG12745" - ], - [ - "gene_synonym", - "GeneID:947608" - ], - [ - "gene_synonym", - "NP_417572.2" - ], - [ - "gene_synonym", - "yqjF" - ], - [ - "gene_synonym", - "ASAP:ABE-0010200" - ], - [ - "gene_synonym", - "b3101" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42619" - ], - [ - "gene_synonym", - "JW5850" - ] - ], - "dna_sequence": "ATGAAAAAATTAGAAGATGTTGGTGTACTGGTAGCGCGCATTTTAATGCCGATTCTGTTTATTACCGCTGGCTGGGGAAAAATTACTGGCTACGCGGGTACCCAACAATATATGGAAGCAATGGGCGTCCCGGGTTTTATGCTGCCACTGGTGATTCTGCTTGAGTTTGGTGGTGGTCTGGCAATCCTGTTCGGTTTCCTGACTCGCACCACAGCCCTGTTTACTGCGGGCTTTACGCTGCTGACGGCATTTTTATTTCACAGCAACTTTGCTGAAGGCGTCAACTCGCTGATGTTCATGAAAAACCTGACAATTTCTGGCGGATTCCTGCTGCTGGCAATTACCGGTCCGGGCGCGTATAGCATCGACCGCCTGCTGAATAAAAAGTGGTAA", - "dna_sequence_length": 393, - "functions": [ - "putative quinol oxidase subunit" - ], - "id": "CDS_3051", - "location": [ - [ - "NC_000913", - 3250562, - "+", - 393 - ] - ], - "md5": "f502d05cf9fd25eeb8014f868cd361a7", - "parent_gene": "", - "protein_md5": "57cdfd3896ab8ea7ca2141046ebb7fba", - "protein_translation": "MKKLEDVGVLVARILMPILFITAGWGKITGYAGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW", - "protein_translation_length": 130, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3093" - ], - [ - "gene_synonym", - "NP_417573.1" - ], - [ - "gene_synonym", - "yqjG" - ], - [ - "gene_synonym", - "ASAP:ABE-0010203" - ], - [ - "gene_synonym", - "GI:16130997" - ], - [ - "gene_synonym", - "JW3073" - ], - [ - "gene_synonym", - "b3102" - ], - [ - "gene_synonym", - "EcoGene:EG12746" - ], - [ - "gene_synonym", - "GeneID:947615" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42620" - ] - ], - "dna_sequence": "ATGGGTCAACTGATTGACGGCGTCTGGCATGACACCTGGTACGATACCAAATCTACCGGCGGTAAATTTCAACGTTCAGCTTCCGCATTTCGTAACTGGCTCACTGCCGATGGCGCTCCTGGCCCCACTGGCACAGGCGGTTTTATCGCAGAGAAAGATCGTTATCATCTCTATGTTTCACTCGCCTGCCCGTGGGCGCACCGCACGCTGATCATGCGCAAACTCAAAGGACTGGAACCGTTTATTTCCGTTTCCGTAGTGAACCCGCTGATGCTGGAAAACGGTTGGACCTTTGATGACAGTTTTCCGGGAGCAACCGGAGACACGCTCTATCAAAATGAATTTCTGTATCAGCTTTATCTCCACGCCGATCCACACTACAGCGGACGAGTTACTGTTCCCGTGCTGTGGGACAAAAAGAACCACACCATCGTCAGCAACGAATCAGCAGAAATCATCCGCATGTTCAATACCGCGTTTGATGCGCTGGGCGCGAAAGCGGGTGATTACTACCCTCCAGCCCTGCAAACAAAAATTGACGAACTTAACGGCTGGATTTATGACACCGTTAACAACGGCGTGTATAAAGCTGGTTTTGCCACCAGCCAGGAAGCTTACGACGAGGCGGTGGCGAAAGTGTTTGAATCGCTGGCACGACTGGAGCAGATTTTAGGCCAGCATCGTTACCTGACCGGCAACCAGCTAACCGAAGCCGATATTCGCCTGTGGACTACGCTGGTGCGTTTTGATCCGGTGTATGTGACCCACTTCAAGTGTGATAAGCACCGCATCAGCGATTACCTGAATCTGTACGGTTTTCTGCGCGATATCTACCAGATGCCGGGGATCGCCGAAACAGTCAATTTCGATCATATCCGTAATCATTACTTCCGCAGCCATAAGACCATCAACCCTACGGGGATTATTTCAATTGGTCCGTGGCAGGATCTCGATGAACCGCATGGACGAGATGTTCGCTTCGGTTAA", - "dna_sequence_length": 987, - "functions": [ - "putative S-transferase" - ], - "id": "CDS_3052", - "location": [ - [ - "NC_000913", - 3251024, - "+", - 987 - ] - ], - "md5": "ab8834f37eb9c306343cb3feba897ab4", - "parent_gene": "", - "protein_md5": "33859abd93ad005a839c1c145e0e2e4a", - "protein_translation": "MGQLIDGVWHDTWYDTKSTGGKFQRSASAFRNWLTADGAPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGATGDTLYQNEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAGDYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRDVRFG", - "protein_translation_length": 328, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3094" - ], - [ - "gene_synonym", - "EcoGene:EG12747" - ], - [ - "gene_synonym", - "ASAP:ABE-0010207" - ], - [ - "gene_synonym", - "yhaH" - ], - [ - "gene_synonym", - "b3103" - ], - [ - "gene_synonym", - "NP_417574.1" - ], - [ - "gene_synonym", - "GI:16130998" - ], - [ - "gene_synonym", - "GeneID:947617" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64590" - ], - [ - "gene_synonym", - "JW3074" - ] - ], - "dna_sequence": "ATGGACTGGTATCTGAAAGTACTAAAAAATTATGTCGGTTTCCGGGGTCGTGCGCGGCGCAAAGAGTACTGGATGTTTATTCTGGTCAACATCATCTTTACGTTCGTGCTGGGGCTGCTGGATAAAATGTTAGGCTGGCAACGCGCTGGTGGCGAAGGCATCCTGACGACAATCTACGGTATTCTGGTGTTTTTACCGTGGTGGGCGGTTCAGTTCCGCCGCCTGCACGACACCGACCGCTCGGCGTGGTGGGCACTGCTATTCTTAATCCCGTTTATCGGCTGGCTTATTATCATCGTCTTTAACTGCCAGGCGGGTACGCCAGGCGAAAACCGCTTTGGACCAGATCCAAAACTGGAACCTTAA", - "dna_sequence_length": 366, - "functions": [ - "DUF805 family inner membrane protein" - ], - "id": "CDS_3053", - "location": [ - [ - "NC_000913", - 3252304, - "+", - 366 - ] - ], - "md5": "740278f4935b5feed8606917206b5abc", - "parent_gene": "", - "protein_md5": "5ff29563b74530a50780d9f4bebaa4b5", - "protein_translation": "MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKMLGWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFNCQAGTPGENRFGPDPKLEP", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010211" - ], - [ - "gene_synonym", - "ECK3095" - ], - [ - "gene_synonym", - "EcoGene:EG12748" - ], - [ - "gene_synonym", - "yhaI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64592" - ], - [ - "gene_synonym", - "GeneID:947612" - ], - [ - "gene_synonym", - "GI:16130999" - ], - [ - "gene_synonym", - "NP_417575.1" - ], - [ - "gene_synonym", - "JW3075" - ], - [ - "gene_synonym", - "b3104" - ] - ], - "dna_sequence": "ATGCAGTGGTATTTGTCCGTATTAAAAAATTATGTTGGTTTCTCTGGTCGCGCACGTCGTAAAGAGTACTGGATGTTTACTCTGATTAACGCCATCGTCGGCGCTATTATCAATGTCATTCAATTGATTTTAGGTCTGGAGCTTCCATATCTGTCTATGCTTTATTTGCTGGCAACCTTCCTTCCCGTCCTTGCGCTTGCTATCCGTCGCTTACACGATACCGACCGTTCAGGTGCCTGGGCCTTGCTCTTTTTTGTTCCGTTTATTGGCTGGCTCGTGCTTCTGGTTTTTTTCTGCACAGAAGGTACTTCTGGCAGCAATCGTTACGGAAACGATCCGAAGTTTGGTTCAAATTAA", - "dna_sequence_length": 357, - "functions": [ - "DUF805 family inner membrane protein" - ], - "id": "CDS_3054", - "location": [ - [ - "NC_000913", - 3252911, - "+", - 357 - ] - ], - "md5": "4d71d9cc7e357d0a1343f3cc7ad00faa", - "parent_gene": "", - "protein_md5": "5457883fbb5e31e291642c74cdd194af", - "protein_translation": "MQWYLSVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLILGLELPYLSMLYLLATFLPVLALAIRRLHDTDRSGAWALLFFVPFIGWLVLLVFFCTEGTSGSNRYGNDPKFGSN", - "protein_translation_length": 118, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12749" - ], - [ - "gene_synonym", - "GeneID:947621" - ], - [ - "gene_synonym", - "ECK3096" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67660" - ], - [ - "gene_synonym", - "NP_417576.1" - ], - [ - "gene_synonym", - "yhaJ" - ], - [ - "gene_synonym", - "ASAP:ABE-0010213" - ], - [ - "gene_synonym", - "JW3076" - ], - [ - "gene_synonym", - "b3105" - ], - [ - "gene_synonym", - "GI:16131000" - ] - ], - "dna_sequence": "ATGGCCAAAGAAAGGGCATTAACGCTGGAAGCACTACGGGTTATGGATGCGATCGATCGCCGGGGCAGTTTTGCGGCGGCGGCGGATGAGCTGGGACGCGTGCCTTCCGCACTTAGCTACACCATGCAAAAACTGGAAGAAGAGCTGGATGTGGTGCTGTTTGACCGCTCGGGCCATCGTACCAAATTCACCAATGTCGGGAGGATGTTGTTGGAGCGAGGGCGCGTTTTGCTGGAAGCCGCAGATAAACTGACTACTGATGCGGAAGCTCTCGCGCGCGGTTGGGAAACGCATCTCACCATTGTGACCGAAGCGCTGGTACCGACACCTGCCTTTTTCCCGTTAATCGACAAACTGGCGGCAAAAGCCAATACCCAACTGGCAATCATCACAGAAGTGCTGGCGGGGGCGTGGGAACGGCTGGAGCAGGGGCGGGCGGATATTGTTATCGCGCCGGATATGCATTTTCGTTCCTCGTCGGAGATCAACTCGCGCAAGCTCTATACGTTAATGAACGTCTACGTTGCCGCGCCTGATCACCCGATTCATCAGGAGCCGGAACCGTTATCTGAAGTGACGCGTGTGAAATATCGTGGAATTGCGGTGGCGGATACCGCTCGTGAGCGCCCGGTGTTGACCGTACAGCTGCTGGACAAACAGCCGCGCTTAACGGTGAGCACGATTGAAGATAAACGTCAGGCATTACTGGCGGGGCTTGGCGTGGCGACGATGCCGTATCCTATGGTCGAAAAAGATATTGCGGAAGGGCGGTTGCGTGTCGTCAGCCCGGAATCGACCAGCGAGATCGATATTATTATGGCCTGGCGTCGTGACAGTATGGGGGAAGCGAAATCCTGGTGTCTGCGGGAAATTCCCAAACTTTTTAACGGAAAATAA", - "dna_sequence_length": 897, - "functions": [ - "LysR family putative transcriptional regulator" - ], - "id": "CDS_3055", - "location": [ - [ - "NC_000913", - 3254214, - "-", - 897 - ] - ], - "md5": "d1e9e6f7e958678871a1108237018c12", - "parent_gene": "", - "protein_md5": "8a7deadc384129ada73c4d1e22f3408e", - "protein_translation": "MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFNGK", - "protein_translation_length": 298, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947620" - ], - [ - "gene_synonym", - "ECK3097" - ], - [ - "gene_synonym", - "EcoGene:EG12750" - ], - [ - "gene_synonym", - "NP_417577.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010217" - ], - [ - "gene_synonym", - "yhaK" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42624" - ], - [ - "gene_synonym", - "JW3077" - ], - [ - "gene_synonym", - "b3106" 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"ATGAGTAAAAAATTGGCCAAAAAGCGCCAGCCGGTGAAGCCCGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAA", - "dna_sequence_length": 165, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_3057", - "location": [ - [ - "NC_000913", - 3255043, - "+", - 165 - ] - ], - "md5": "559b6a8a7ef6dafff77fb9a97f5a913a", - "parent_gene": "", - "protein_md5": "97ee3b0adf2f0e29085f45bb89bc3b92", - "protein_translation": "MSKKLAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAETRLAEDEATA", - "protein_translation_length": 54, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12752" - ], - [ - "gene_synonym", - "ASAP:ABE-0174100" - ], - [ - "gene_synonym", - "b4470" - ], - [ - "gene_synonym", - "GeneID:2847723" - ], - [ - "gene_synonym", - "ECK3099" - ], - [ - "gene_synonym", - "GI:49176312" - ], - [ - "gene_synonym", - "yhaM" - ], - [ - "gene_synonym", - "yhaN" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42626" - ], - [ - "gene_synonym", - "JW5518" - ], - [ - "gene_synonym", - "YP_026202.1" - ] - ], - "dna_sequence": "ATGTTTGATTCGACTTTAAATCCGTTATGGCAGCGTTACATCCTCGCCGTTCAGGAGGAAGTAAAACCGGCGCTGGGATGTACTGAACCGATTTCACTGGCGCTGGCGGCGGCGGTTGCTGCGGCAGAACTGGAAGGTCCGGTTGAACGTGTAGAAGCCTGGGTTTCGCCAAATCTGATGAAGAACGGTCTGGGCGTCACCGTTCCCGGCACGGGAATGGTGGGGCTGCCGATTGCGGCGGCGCTGGGGGCGTTAGGTGGAAATGCCAACGCCGGGCTGGAAGTGCTGAAAGACGCAACAGCGCAGGCAATTGCCGATGCCAAAGCACTGCTGGCGGCGGGGAAAGTCTCCGTTAAGATCCAGGAACCTTGCGATGAAATCCTCTTCTCACGCGCCAAAGTCTGGAACGGTGAGAAGTGGGCGTGTGTCACCATCGTCGGCGGGCATACCAACATTGTGCATATCGAGACGCACGATGGTGTGGTGTTTACCCAGCAGGCGTGTGTGGCAGAGGGCGAGCAAGAGTCTCCGCTGACGGTGCTTTCCAGAACGACGCTGGCTGAGATCCTGAAGTTCGTCAATGAAGTCCCGTTTGCGGCGATCCGCTTTATTCTCGATTCCGCGAAGCTAAATTGTGCGTTATCGCAGGAAGGTTTGAGCGGTAAGTGGGGGCTGCATATTGGCGCGACGCTGGAAAAACAGTGCGAGCGCGGTTTGCTGGCGAAAGATCTCTCTTCATCCATTGTGATTCGTACCAGCGCGGCATCCGATGCGCGTATGGGCGGCGCTACGCTTCCGGCTATGAGTAACTCCGGCTCGGGTAACCAGGGGATTACCGCAACAATGCCTGTGGTGGTGGTAGCAGAACACTTCGGAGCGGATGATGAACGGCTGGCGCGTGCGCTGATGCTTTCGCATTTGAGCGCAATTTACATCCATAACCAGTTACCGCGTTTGTCTGCGCTGTGTGCCGCAACGACCGCAGCAATGGGGGCCGCCGCCGGGATGGCATGGCTGGTGGATGGGCGTTATGAAACCATCTCGATGGCGATCAGCAGTATGATCGGCGATGTCAGCGGCATGATTTGCGATGGTGCGTCGAACAGCTGCGCGATGAAGGTTTCGACCAGTGCTTCGGCTGCGTGGAAAGCGGTGTTAATGGCGCTGGATGATACCGCCGTGACCGGCAATGAAGGGATTGTGGCGCATGATGTTGAGCAGTCGATTGCCAACCTGTGTGCGTTAGCAAGCCATTCGATGCAGCAAACGGATCGGCAGATTATCGAGATTATGGCGAGCAAGGCCAGATAA", 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"gene_synonym", - "GI:145698312" - ], - [ - "gene_synonym", - "yhaO" - ], - [ - "gene_synonym", - "ASAP:ABE-0010228" - ], - [ - "gene_synonym", - "YP_026203.3" - ], - [ - "gene_synonym", - "b3110" - ], - [ - "gene_synonym", - "JW5519" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42628" - ] - ], - "dna_sequence": "ATGGAAATTGCATCGAATAAAGGCGTCATTGCAGACGCTTCGACCCCGGCGGGTCGTGCTGGAATGAGTGAGAGCGAGTGGCGAGAAGCGATCAAATTCGACAGTACTGACACCGGCTGGGTGATTATGAGTATCGGGATGGCGATTGGCGCGGGGATTGTTTTTCTCCCGGTGCAGGTCGGTTTGATGGGATTGTGGGTATTTTTGCTCTCATCGGTGATTGGTTACCCGGCAATGTATCTGTTTCAGCGATTGTTTATTAATACGCTGGCAGAATCACCAGAATGTAAAGATTACCCGAGCGTCATTAGCGGTTATTTAGGTAAAAACTGGGGCATCCTGTTAGGTGCGCTCTATTTCGTAATGCTGGTGATTTGGATGTTCGTCTATTCCACCGCCATCACCAACGATAGTGCTTCCTACCTGCATACCTTCGGCGTGACGGAAGGGTTGCTGTCAGACAGTCCCTTTTATGGTCTGGTACTGATTTGCATTCTGGTGGCGATCTCCTCACGCGGCGAGAAATTGTTATTCAAAATTTCGACCGGCATGGTGCTGACCAAGCTGCTGGTGGTCGCGGCGCTGGGCGTGTCGATGGTGGGAATGTGGCATCTGTATAACGTCGGTTCGCTACCGCCGCTGGGGCTGCTGGTGAAAAACGCCATTATTACGCTGCCGTTTACCCTGACGTCGATTCTGTTTATCCAGACGTTAAGTCCGATGGTGATCTCTTATCGCTCGCGGGAAAAATCAATTGAAGTGGCGCGGCATAAAGCATTGCGGGCAATGAATATCGCGTTTGGCATTTTGTTTGTCACCGTCTTTTTCTACGCCGTGTCGTTCACGCTGGCGATGGGACATGACGAAGCGGTAAAAGCCTATGAGCAGAATATTTCCGCGCTGGCGATTGCCGCACAGTTTATTAGCGGTGACGGCGCAGCGTGGGTGAAAGTGGTCAGCGTCATTCTCAATATCTTTGCTGTCATGACTGCATTCTTTGGCGTCTATTTAGGCTTTCGCGAAGCAACGCAAGGGATCGTAATGAACATCCTGCGTCGCAAGATGCCTGCCGAGAAGATTAACGAAAATCTCGTTCAGCGCGGCATCATGATTTTCGCCATTTTGCTGGCCTGGAGCGCCATCGTACTGAACGCACCGGTGTTGAGCTTCACCTCTATCTGTAGCCCGATTTTCGGCATGGTAGGGTGCCTGATCCCGGCGTGGCTGGTTTACAAAGTACCAGCATTGCACAAATACAAAGGGATGTCTCTGTACCTGATTATCGTCACTGGTTTGTTGCTGTGTGTTTCTCCGTTCCTGGCATTTTCTTGA", - "dna_sequence_length": 1332, - "functions": [ - "putative transporter" - ], - "id": "CDS_3059", - "location": [ - [ - "NC_000913", - 3258010, - "-", - 1332 - ] - ], - "md5": "bb728211de7adf600f369e77a6ba779a", - "parent_gene": "", - "protein_md5": "a33e6b3bc0e4babe7abbd6b9d416d229", - "protein_translation": "MEIASNKGVIADASTPAGRAGMSESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSVIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNVGSLPPLGLLVKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGILFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAAWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKINENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGMSLYLIIVTGLLLCVSPFLAFS", - "protein_translation_length": 443, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_026204.1" - ], - [ - "gene_synonym", - "EcoGene:EG12756" - ], - [ - "gene_synonym", - "tdcG" - ], - [ - "gene_synonym", - "ASAP:ABE-0174101" - ], - [ - "gene_synonym", - "ECK3101" - ], - [ - "gene_synonym", - "b4471" - ], - [ - "gene_synonym", - "GI:49176314" - ], - [ - "gene_synonym", - "yhaP" - ], - [ - "gene_synonym", - "yhaQ" - ], - [ - "gene_synonym", - "GeneID:2847724" - ], - [ - "gene_synonym", - "JW5520" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42630" - ] - ], - "dna_sequence": "ATGATTAGTGCATTCGATATTTTCAAAATTGGGATTGGTCCCTCCAGTTCGCATACCGTGGGGCCAATGAATGCCGGAAAAAGTTTTATTGATCGGCTGGAAAGTAGCGGCTTATTAACCGCGACGAGCCATATTGTGGTCGATCTGTACGGGTCGTTGTCACTGACGGGCAAAGGCCATGCCACGGATGTCGCCATCATCATGGGACTGGCAGGAAACAGTCCGCAGGATGTTGTCATTGATGAGATCCCTGCATTTATAGAGTTAGTAACGCGCAGCGGGCGGCTGCCAGTGGCATCTGGTGCGCATATTGTTGATTTTCCTGTAGCAAAGAACATTATCTTCCATCCCGAAATGTTGCCTCGCCATGAGAACGGAATGCGGATCACTGCCTGGAAGGGACAGGAAGAGCTATTAAGTAAAACCTATTACTCTGTCGGCGGCGGGTTTATTGTCGAAGAAGAACACTTCGGCCTGTCGCACGATGTCGAAACGTCCGTACCTTACGATTTCCACTCAGCAGGTGAACTGCTGAAAATGTGTGATTACAACGGCCTGTCTATATCTGGTCTGATGATGCACAACGAGCTAGCGCTGCGCAGCAAAGCGGAAATTGACGCCGGTTTTGCCCGTATCTGGCAAGTGATGCATGACGGTATTGAACGTGGGATGAACACTGAAGGCGTGCTGCCTGGTCCGCTCAATGTGCCGCGCCGTGCCGTAGCGCTGCGTCGTCAGCTGGTTTCCAGCGATAACATCTCTAACGATCCGATGAATGTCATCGACTGGATCAACATGTACGCGCTGGCGGTTAGTGAAGAAAACGCAGCTGGCGGGCGCGTGGTAACGGCACCGACTAACGGTGCGTGCGGCATTATTCCGGCAGTACTGGCTTATTACGATAAGTTCCGTCGTCCGGTAAACGAGCGGTCAATTGCCCGCTATTTTCTGGCCGCGGGGGCTATTGGCGCGCTGTATAAAATGAACGCCTCCATCTCTGGCGCGGAAGTCGGCTGTCAGGGGGAGATTGGCGTGGCCTGTTCAATGGCGGCGGCAGGGTTAACTGAACTACTGGGCGGCAGTCCGGCGCAGGTATGCAATGCGGCGGAAATCGCGATGGAGCATAACCTTGGGCTGACCTGCGATCCGGTTGCCGGACAGGTACAAATCCCGTGCATTGAACGTAATGCCATTAATGCCGTGAAAGCAGTAAACGCCGCGCGGATGGCGATGCGCCGCACCTCGGCACCGCGTGTTTCACTCGATAAAGTGATCGAGACGATGTATGAAACCGGCAAAGATATGAACGATAAATACCGCGAAACATCACGCGGAGGACTGGCCATTAAAGTGGTCTGCGGCTGA", - "dna_sequence_length": 1365, - "functions": [ - "L-serine dehydratase 3, anaerobic" - ], - "id": "CDS_3060", - "location": [ - [ - "NC_000913", - 3259649, - "-", - 1365 - ] - ], - "md5": "2bc7c5edde47841258f29620937121ba", - "parent_gene": "", - "protein_md5": "ad3dcde116d7f4700f753f2ada40f229", - "protein_translation": "MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSHIVVDLYGSLSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGAHIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEELLSKTYYSVGGGFIVEEEHFGLSHDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHDGIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISGAEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG", - "protein_translation_length": 454, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12757" - ], - [ - "gene_synonym", - "tdcF" - ], - [ - "gene_synonym", - "GeneID:947624" - ], - [ - "gene_synonym", - "ECK3102" - ], - [ - "gene_synonym", - "b3113" - ], - [ - "gene_synonym", - "ASAP:ABE-0010240" - ], - [ - "gene_synonym", - "yhaR" - ], - [ - "gene_synonym", - "NP_417583.4" - ], - [ - "gene_synonym", - "JW5521" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGL2" - ], - [ - "gene_synonym", - "GI:90111542" - ] - ], - "dna_sequence": "ATGAAAAAGATTATCGAAACGCAACGTGCCCCAGGCGCAATCGGCCCTTATGTTCAGGGCGTTGATTTAGGCAGCATGGTCTTCACCTCCGGGCAAATACCGGTTTGCCCACAGACCGGTGAGATCCCGGCTGATGTGCAAGATCAGGCGCGTTTAAGCCTCGAAAACGTCAAAGCGATCGTGGTTGCTGCCGGGCTGAGCGTGGGCGATATCATCAAGATGACCGTGTTTATCACCGATCTGAATGATTTTGCCACCATCAACGAAGTCTATAAGCAGTTCTTCGATGAGCATCAGGCGACCTATCCGACCCGGAGCTGTGTGCAGGTCGCGCGTTTGCCGAAAGATGTGAAGCTGGAAATTGAAGCCATCGCAGTACGTAGTGCGTAA", - "dna_sequence_length": 390, - "functions": [ - "putative reactive intermediate deaminase" - ], - "id": "CDS_3061", - "location": [ - [ - "NC_000913", - 3260110, - "-", - 390 - ] - ], - "md5": "93c83ad1545ab3ccbedff787eef8c2c1", - "parent_gene": "", - "protein_md5": "806d23732eecf3a07d4a5478b9c46f34", - "protein_translation": "MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIAVRSA", - "protein_translation_length": 129, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tdcE" - ], - [ - "gene_synonym", - "b3114" - ], - [ - "gene_synonym", - "GeneID:947623" - ], - [ - "gene_synonym", - "ECK3103" - ], - [ - "gene_synonym", - "GI:49176316" - ], - [ - "gene_synonym", - "ASAP:ABE-0010242" - ], - [ - "gene_synonym", - "YP_026205.1" - ], - [ - "gene_synonym", - "EcoGene:EG12758" - ], - [ - "gene_synonym", - "yhaS" - ], - [ - "gene_synonym", - "JW5522" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42632" - ] - ], - "dna_sequence": "ATGAAGGTAGATATTGATACCAGCGATAAGCTGTACGCCGACGCATGGCTTGGCTTTAAAGGTACGGACTGGAAAAACGAAATTAATGTCCGCGATTTTATTCAACATAACTATACACCGTATGAAGGCGATGAATCTTTCCTCGCCGAAGCGACGCCTGCCACCACGGAATTGTGGGAAAAAGTAATGGAAGGCATCCGTATCGAAAATGCAACCCACGCGCCGGTTGATTTCGATACCAATATTGCCACCACAATTACCGCTCATGATGCGGGATATATTAACCAGCCGCTGGAAAAAATTGTTGGCCTGCAAACGGATGCGCCGTTGAAACGTGCGCTACACCCGTTCGGTGGCATTAATATGATTAAAAGTTCATTCCACGCCTATGGCCGAGAAATGGACAGTGAATTTGAATATCTGTTTACCGATCTGCGTAAAACCCATAACCAGGGCGTATTTGATGTTTACTCACCGGATATGCTGCGCTGCCGTAAATCTGGCGTGCTGACCGGTTTACCAGATGGCTATGGCCGTGGGCGCATTATCGGTGACTATCGCCGCGTAGCGCTGTATGGCATCAGTTATCTGGTACGTGAACGCGAACTGCAATTTGCCGATCTCCAGTCTCGTCTGGAAAAAGGCGAGGATCTGGAAGCCACCATCCGTCTGCGTGAGGAGCTGGCAGAGCATCGTCATGCGCTGTTGCAGATTCAGGAAATGGCGGCGAAATATGGCTTTGATATCTCTCGCCCGGCGCAGAATGCGCAGGAAGCGGTGCAGTGGCTCTACTTCGCTTATCTGGCGGCAGTGAAATCGCAAAATGGCGGCGCGATGTCGCTGGGCCGCACGGCATCGTTCCTCGATATCTACATTGAGCGCGACTTTAAAGCTGGCGTACTCAATGAGCAGCAGGCACAGGAACTGATCGATCACTTCATCATGAAGATCCGTATGGTACGCTTCCTGCGTACACCGGAATTTGATTCGCTGTTCTCCGGCGACCCAATCTGGGCGACGGAAGTGATCGGCGGGATGGGGCTGGACGGTCGTACGCTGGTGACCAAAAACTCCTTCCGCTATTTGCACACCCTGCACACTATGGGGCCGGCACCGGAACCTAACCTGACCATTCTTTGGTCGGAAGAATTACCGATTGCCTTCAAAAAATATGCCGCGCAGGTGTCGATCGTCACCTCTTCCTTGCAGTATGAAAATGACGATCTGATGCGTACTGACTTCAACAGCGACGATTACGCGATTGCCTGCTGCGTCAGCCCAATGGTGATTGGTAAGCAAATGCAGTTCTTTGGTGCACGCGCTAACCTGGCGAAAACGCTGCTCTACGCAATTAACGGCGGGGTGGACGAGAAGCTGAAGATTCAGGTCGGGCCGAAAACAGCACCGCTGATGGACGACGTGCTGGATTACGACAAAGTGATGGACAGCCTCGATCACTTCATGGACTGGCTGGCGGTGCAGTACATCAGCGCGCTGAATATCATTCACTACATGCACGACAAGTACAGCTACGAAGCTTCGCTGATGGCGCTGCACGATCGTGATGTCTATCGCACTATGGCATGCGGCATCGCGGGCCTGTCGGTGGCGACGGACTCCCTGTCTGCCATCAAATATGCCCGCGTGAAACCAATCCGTGACGAAAACGGCCTGGCGGTGGACTTTGAAATCGACGGTGAATATCCGCAGTACGGCAACAACGACGAGCGCGTAGACAGCATTGCCTGCGACCTGGTTGAACGCTTTATGAAGAAAATTAAAGCGCTGCCAACCTATCGCAACGCCGTCCCTACCCAGTCGATTCTGACTATCACTTCTAACGTGGTGTACGGCCAGAAAACCGGTAATACGCCGGACGGTCGTCGCGCCGGAACACCGTTCGCGCCGGGCGCTAACCCGATGCATGGTCGTGACCGCAAAGGTGCCGTGGCCTCATTGACGTCGGTGGCGAAACTGCCGTTCACCTACGCCAAAGATGGGATCTCGTACACCTTCTCAATCGTTCCTGCGGCGCTGGGCAAAGAAGATCCAGTACGTAAAACCAACCTTGTCGGCCTGCTGGATGGGTATTTCCACCACGAAGCGGATGTCGAAGGCGGTCAACACCTCAACGTCAACGTAATGAATCGGGAAATGCTGCTGGATGCCATCGAGCACCCGGAAAAATATCCTAACCTGACAATCCGTGTCTCTGGCTACGCCGTGCGCTTCAACGCACTGACCCGTGAACAGCAACAGGATGTTATTTCACGTACCTTTACCCAGGCGCTCTGA", - "dna_sequence_length": 2295, - "functions": [ - "pyruvate formate-lyase 4/2-ketobutyrate formate-lyase" - ], - "id": "CDS_3062", - "location": [ - [ - "NC_000913", - 3262418, - "-", - 2295 - ] - ], - "md5": "3465fcb2a7f97ae8fd45f151796f302e", - "parent_gene": "", - "protein_md5": "24875adb4d2550b6da24948f620f7f72", - "protein_translation": "MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGDESFLAEATPATTELWEKVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIVGLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPDMLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDLEATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNGGAMSLGRTASFLDIYIERDFKAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYAAQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDGEYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKEDPVRKTNLVGLLDGYFHHEADVEGGQHLNVNVMNREMLLDAIEHPEKYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAL", - "protein_translation_length": 764, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3104" - ], - [ - "gene_synonym", - "tdcD" - ], - [ - "gene_synonym", - "JW5806" - ], - [ - "gene_synonym", - "NP_417585.2" - ], - [ - "gene_synonym", - "b3115" - ], - [ - "gene_synonym", - "GI:145698313" - ], - [ - "gene_synonym", - "GeneID:947635" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11868" - ], - [ - "gene_synonym", - "ASAP:ABE-0010245" - ], - [ - "gene_synonym", - "EcoGene:EG11172" - ], - [ - "gene_synonym", - "yhaA" - ] - ], - "dna_sequence": "ATGAATGAATTTCCGGTTGTTTTGGTTATTAACTGTGGTTCGTCTTCGATTAAGTTTTCCGTGCTCGATGCCAGCGACTGTGAAGTATTAATGTCAGGTATTGCCGACGGTATTAACTCGGAAAATGCATTCTTATCCGTAAATGGGGGAGAGCCAGCACCGCTGGCTCACCACAGCTACGAAGGTGCATTGAAGGCAATTGCATTTGAACTGGAAAAACGGAATTTAAATGACAGTGTGGCCTTAATTGGCCACCGCATCGCTCACGGCGGCAGTATTTTTACCGAGTCCGCCATTATTACCGATGAAGTCATTGATAATATCCGTCGCGTTTCTCCACTGGCACCCCTGCATAATTACGCCAATTTAAGTGGTATTGAATCGGCGCAGCAATTATTTCCGGGCGTAACTCAGGTGGCGGTATTTGATACCAGTTTCCACCAGACGATGGCTCCGGAAGCTTATTTATACGGCCTGCCGTGGAAATATTATGAAGAGTTAGGTGTACGCCGTTATGGTTTCCACGGCACGTCGCACCGCTATGTTTCCCAGCGCGCACATTCGCTGCTGAATCTGGCGGAAGATGACTCCGGCCTGGTTGTGGCGCATCTTGGCAATGGCGCGTCAATCTGCGCGGTTCGCAACGGTCAGAGTGTTGATACCTCAATGGGAATGACGCCGCTGGAAGGCTTGATGATGGGTACCCGCAGTGGCGATGTCGACTTTGGTGCGATGTCCTGGGTCGCCAGCCAAACCAACCAGAGCCTGGGTGACCTGGAACGCGTAGTGAATAAAGAGTCGGGATTATTAGGTATTTCCGGTCTTTCTTCGGATTTACGTGTTCTGGAAAAAGCCTGGCATGAAGGTCACGAACGCGCGCAACTGGCAATTAAAACCTTTGTTCACCGAATTGCCCGTCATATTGCCGGACACGCAGCTTCATTACGTCGCCTGGATGGAATTATATTCACCGGCGGAATAGGAGAGAATTCAAGCTTAATTCGTCGTCTGGTCATGGAACATTTGGCTGTATTAGGCTTAGAGATTGATACAGAAATGAATAATCGCTCTAACTCCTGTGGTGAGCGAATTGTTTCCAGTGAAAATGCGCGTGTCATTTGTGCCGTTATTCCGACTAACGAAGAAAAAATGATTGCTTTGGATGCCATTCATTTAGGCAAAGTTAACGCGCCCGCAGAATTTGCATAA", - "dna_sequence_length": 1209, - "functions": [ - "propionate kinase/acetate kinase C, anaerobic" - ], - "id": "CDS_3063", - "location": [ - [ - "NC_000913", - 3263660, - "-", - 1209 - ] - ], - "md5": "3b6195b508586bb8f334a77c0986329b", - "parent_gene": "", - "protein_md5": "d962ca2e62e2633b629c9e0722a22b09", - "protein_translation": "MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAFLSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITDEVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLPWKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLIRRLVMEHLAVLGLEIDTEMNNRSNSCGERIVSSENARVICAVIPTNEEKMIALDAIHLGKVNAPAEFA", - "protein_translation_length": 402, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3105" - ], - [ - "gene_synonym", - "b3116" - ], - [ - "gene_synonym", - "tdcC" - ], - [ - "gene_synonym", - "GeneID:947629" - ], - [ - "gene_synonym", - "NP_417586.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010247" - ], - [ - "gene_synonym", - "EcoGene:EG10991" - ], - [ - "gene_synonym", - "JW3087" - ], - [ - "gene_synonym", - "GI:16131009" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAD8" - ] - ], - "dna_sequence": "ATGAGTACTTCAGATAGCATTGTATCCAGCCAGACAAAACAATCGTCCTGGCGTAAATCAGATACCACATGGACGTTAGGCTTGTTTGGTACGGCAATCGGCGCCGGGGTGCTGTTCTTCCCTATCCGCGCAGGTTTTGGCGGACTGATCCCGATTCTTCTGATGTTGGTATTGGCATACCCCATCGCGTTTTATTGCCACCGGGCGCTGGCGCGTCTGTGTCTTTCTGGCTCTAACCCTTCCGGCAACATTACGGAAACGGTGGAAGAGCATTTTGGTAAAACTGGCGGCGTGGTTATCACGTTCCTGTACTTCTTCGCGATTTGCCCACTGCTGTGGATTTATGGCGTTACTATTACCAATACCTTTATGACGTTCTGGGAAAACCAGCTCGGCTTTGCACCGCTGAATCGCGGCTTTGTGGCGCTGTTCCTGTTGCTGCTGATGGCTTTCGTCATCTGGTTTGGTAAGGATCTGATGGTTAAAGTGATGAGCTACCTGGTATGGCCGTTTATCGCCAGCCTGGTGCTGATTTCTTTGTCGCTGATCCCTTACTGGAACTCTGCAGTTATCGACCAGGTTGACCTCGGTTCGCTGTCGTTAACCGGTCATGACGGTATCCTGATCACTGTCTGGCTGGGGATTTCCATCATGGTTTTCTCCTTTAACTTCTCGCCAATCGTCTCTTCCTTCGTGGTTTCTAAGCGTGAAGAGTATGAGAAAGACTTCGGTCGCGACTTCACCGAACGTAAATGTTCCCAAATCATTTCTCGTGCCAGCATGCTGATGGTTGCAGTGGTGATGTTCTTTGCCTTTAGCTGCCTGTTTACTCTGTCTCCGGCCAACATGGCGGAAGCCAAAGCGCAGAATATTCCAGTGCTTTCTTATCTGGCTAACCACTTTGCGTCCATGACCGGTACCAAAACAACGTTCGCGATTACACTGGAATATGCGGCTTCCATCATCGCACTCGTGGCTATCTTCAAATCTTTCTTCGGTCACTATCTGGGAACGCTGGAAGGTCTGAATGGCCTGGTCCTGAAGTTTGGTTATAAAGGCGACAAAACTAAAGTGTCGCTGGGTAAACTGAACACTATCAGCATGATCTTCATCATGGGCTCCACCTGGGTTGTTGCCTACGCCAACCCGAACATCCTTGACCTGATTGAAGCCATGGGCGCACCGATTATCGCATCCCTGCTGTGCCTGTTGCCGATGTATGCCATCCGTAAAGCGCCGTCTCTGGCGAAATACCGTGGTCGTCTGGATAACGTGTTTGTTACCGTGATTGGTCTGCTGACCATCCTGAACATCGTATACAAACTGTTTTAA", - "dna_sequence_length": 1332, - "functions": [ - "L-threonine/L-serine transporter" - ], - "id": "CDS_3064", - "location": [ - [ - "NC_000913", - 3265017, - "-", - 1332 - ] - ], - "md5": "6355f89856db38701385e44ca2bc4156", - "parent_gene": "", - "protein_md5": "a330b1b5749d3a06929053f127e08624", - "protein_translation": "MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLVLKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF", - "protein_translation_length": 443, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947633" - ], - [ - "gene_synonym", - "ECK3106" - ], - [ - "gene_synonym", - "b3117" - ], - [ - "gene_synonym", - "tdcB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGF6" - ], - [ - "gene_synonym", - "ASAP:ABE-0010249" - ], - [ - "gene_synonym", - "EcoGene:EG10990" - ], - [ - "gene_synonym", - "NP_417587.1" - ], - [ - "gene_synonym", - "GI:16131010" - ], - [ - "gene_synonym", - "JW3088" - ] - ], - "dna_sequence": "ATGCATATTACATACGATCTGCCGGTTGCTATTGATGACATTATTGAAGCGAAACAACGACTGGCTGGGCGAATTTATAAAACAGGCATGCCTCGCTCCAACTATTTTAGTGAACGTTGCAAAGGTGAAATATTCCTGAAGTTTGAAAATATGCAGCGTACGGGTTCATTTAAAATTCGTGGCGCATTTAATAAATTAAGTTCACTGACCGATGCGGAAAAACGCAAAGGCGTGGTGGCCTGTTCTGCGGGCAACCATGCGCAAGGGGTTTCCCTCTCCTGCGCGATGCTGGGTATCGACGGTAAAGTGGTGATGCCAAAAGGTGCGCCAAAATCCAAAGTAGCGGCAACGTGCGACTACTCCGCAGAAGTCGTTCTGCATGGTGATAACTTCAACGACACTATCGCTAAAGTGAGCGAAATTGTCGAAATGGAAGGCCGTATTTTTATCCCACCTTACGATGATCCGAAAGTGATTGCTGGCCAGGGAACGATTGGTCTGGAAATTATGGAAGATCTCTATGATGTCGATAACGTGATTGTGCCAATTGGTGGTGGCGGTTTAATTGCTGGTATTGCGGTGGCAATTAAATCTATTAACCCGACCATTCGTGTTATTGGCGTACAGTCTGAAAACGTTCACGGCATGGCGGCTTCTTTCCACTCCGGAGAAATAACCACGCACCGAACTACCGGCACCCTGGCGGATGGTTGTGATGTCTCCCGCCCGGGTAATTTAACTTACGAAATCGTTCGTGAATTAGTCGATGACATCGTGCTGGTCAGCGAAGACGAAATCAGAAACAGTATGATTGCCTTAATTCAGCGCAATAAAGTCGTCACCGAAGGCGCAGGCGCTCTGGCATGTGCTGCATTATTAAGCGGTAAATTAGACCAATATATTCAAAACAGAAAAACCGTCAGTATTATTTCCGGCGGCAATATCGATCTTTCTCGCGTCTCTCAAATCACCGGTTTCGTTGACGCTTAA", - "dna_sequence_length": 990, - "functions": [ - "L-threonine dehydratase, catabolic" - ], - "id": "CDS_3065", - "location": [ - [ - "NC_000913", - 3266028, - "-", - 990 - ] - ], - "md5": "01f209a409357d17f9ef64a82ac0e6aa", - "parent_gene": "", - "protein_md5": "994df575ca9a00e2f723808a842887e5", - "protein_translation": "MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA", - "protein_translation_length": 329, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACQ7" - ], - [ - "gene_synonym", - "ECK3107" - ], - [ - "gene_synonym", - "tdcA" - ], - [ - "gene_synonym", - "ASAP:ABE-0010252" - ], - [ - "gene_synonym", - "b3118" - ], - [ - "gene_synonym", - "GeneID:947494" - ], - [ - "gene_synonym", - "EcoGene:EG10989" - ], - [ - "gene_synonym", - "NP_417588.1" - ], - [ - "gene_synonym", - "GI:16131011" - ], - [ - "gene_synonym", - "JW3089" - ] - ], - "dna_sequence": "ATGAGCACTATTCTTCTTCCGAAAACGCAGCACCTGGTAGTCTTTCAGGAAGTCATTAGAAGTGGTTCTATCGGCTCGGCTGCAAAAGAATTAGGGTTAACTCAACCGGCCGTCAGTAAAATCATTAACGATATTGAAGATTATTTTGGTGTGGAATTAGTGGTGCGGAAAAATACCGGTGTAACATTAACACCTGCCGGTCAATTGTTACTCTCCCGTTCCGAATCCATTACCCGTGAAATGAAAAATATGGTTAATGAGATAAGCGGTATGTCTTCTGAGGCGGTGGTGGAAGTCTCATTTGGTTTTCCTTCATTGATTGGTTTTACTTTTATGTCAGGGATGATCAACAAGTTCAAAGAGGTGTTCCCGAAAGCGCAGGTTTCTATGTATGAAGCGCAACTGTCTTCGTTCTTACCGGCAATCCGCGACGGTCGACTGGATTTTGCGATTGGTACGTTAAGTGCAGAAATGAAGCTTCAGGATTTACATGTTGAGCCGCTGTTCGAGTCCGAGTTTGTGCTGGTAGCCAGTAAGTCCCGAACATGCACCGGCACCACCACGCTGGAGTCGTTGAAGAACGAACAGTGGGTGTTGCCACAAACTAATATGGGGTACTACAGCGAACTGCTTACTACGTTACAAAGAAATGGCATCAGTATTGAAAACATCGTTAAAACCGACTCAGTCGTGACAATTTATAATCTTGTTCTCAATGCTGATTTCTTAACTGTAATTCCTTGTGATATGACGTCACCTTTTGGTTCTAATCAATTTATTACTATTCCGGTTGAAGAAACATTACCTGTGGCACAATATGCCGCGGTATGGTCGAAAAATTATCGTATTAAAAAAGCAGCATCGGTTTTGGTGGAATTAGCCAAAGAGTATTCATCTTATAATGGGTGTAGACGAAGGCAATTAATAGAAGTTGGTTAG", - "dna_sequence_length": 939, - "functions": [ - "tdc 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"EcoGene:EG10992" - ], - [ - "gene_synonym", - "NP_417589.4" - ], - [ - "gene_synonym", - "JW5525" - ] - ], - "dna_sequence": "ATGAGCAAGTTCTCAAATTTTATTATAAATAAACCATTTTCAGTGATAAATAATGCGGCATGTCACATTTTTTCACGCTATTTGTTGGAGAACAAACATTTATTTTATCAATATTTTAAAATTTCGAATACATGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATTTTGTGAATGCAATCGTTTTCCATAA", - "dna_sequence_length": 219, - "functions": [ - "L-threonine dehydratase operon activator protein" - ], - "id": "CDS_3067", - "location": [ - [ - "NC_000913", - 3267380, - "+", - 219 - ] - ], - "md5": "0d16ffeac2773569f0dbbaae402f5b33", - "parent_gene": "", - "protein_md5": "63b248a800619c52826c0f4d9ea830e3", - "protein_translation": "MSKFSNFIINKPFSVINNAACHIFSRYLLENKHLFYQYFKISNTCIDHLEQLINVNFFSSDRTSFCECNRFP", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11865" - ], - [ - "gene_synonym", - "ASAP:ABE-0010261" - ], - [ - "gene_synonym", - "ECK3109" - ], - [ - "gene_synonym", - "NP_417590.2" - ], - [ - "gene_synonym", - "GeneID:947705" - ], - [ - "gene_synonym", - "JW3091" - ], - [ - "gene_synonym", - "GI:90111544" - ], - [ - "gene_synonym", - "EcoGene:EG11173" - ], - [ - "gene_synonym", - "b3120" - ], - [ - "gene_synonym", - "yhaB" - ] - ], - "dna_sequence": "ATGAAAGGCTTCCCAATTGCGCATATTTTTCACCCTTCAATCCCGCCAATGCACGCAGTGGTTAACAATCACAATAGAAATATTGATTATTGGACGGTAAAAAGAAAGTTTGCAGAAATTGTCTCCACCAATGACGTTAATAAAATTTACAGTATAAGTAATGAACTGCGGAGAGTATTATCTGCAATAACTGCATTGAATTTCTATCATGGCGATGTTCCTTCTGTCATGATCCGAATCCAACCGGAAAATATGAGTCCATTCATTATAGATATTTCTACAGGAGAACATGATGATTATATCATACAAACATTAGATGTAGGCACTTTTGCACCTTTTGGTGAACAATGTACTTGCTCAGCCGTCAATAAAAAAGAGCTGGAATGTATTAAGGAGACGATTTCTAAGTATTGTGCAAAATTCACCCGAAAAGAAGCCATCTTAACCCCCCTTGTGCACTTTAATAAAACCAGCATTACTTCAGATTGTTGGCAAATTCTCTTTTTTTCACCCGATCATTTTAATAATGATTTTTATTGA", - "dna_sequence_length": 540, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_3068", - "location": [ - [ - "NC_000913", - 3267854, - "+", - 540 - ] - ], - "md5": "3adf1003c46653fe307dbe0f381c4744", - "parent_gene": "", - "protein_md5": "1bd6f061a4480e50acdf6f79fcdf1b5d", - "protein_translation": "MKGFPIAHIFHPSIPPMHAVVNNHNRNIDYWTVKRKFAEIVSTNDVNKIYSISNELRRVLSAITALNFYHGDVPSVMIRIQPENMSPFIIDISTGEHDDYIIQTLDVGTFAPFGEQCTCSAVNKKELECIKETISKYCAKFTRKEAILTPLVHFNKTSITSDCWQILFFSPDHFNNDFY", - "protein_translation_length": 179, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11864" - ], - [ - "gene_synonym", - "ECK3110" - ], - [ - "gene_synonym", - "GeneID:947557" - ], - [ - "gene_synonym", - "ASAP:ABE-0010263" - ], - [ - "gene_synonym", - "NP_417591.1" - ], - [ - "gene_synonym", - "JW3092" - ], - [ - "gene_synonym", - "GI:16131014" - ], - [ - "gene_synonym", - "EcoGene:EG11174" - ], - [ - "gene_synonym", - "b3121" - ], - [ - "gene_synonym", - "yhaC" - ] - ], - "dna_sequence": "ATGTTCCCTGTTTCATCAATTGGTAATGATATTAGTAGTGATTTAGTCCGTCGAAAAATGAATGACCTTCCTGAAAGCCCAACAGGAAATAACCTCGAAGCACTAGCACCAGGTATAGAAAAACTAAAACAGACCTCTATTGAAATGGTCACTTTACTTAACACGTTACAACCTGGTGGAAAATGCATTATCACTGGTGATTTTCAAAAAGAATTAGCGTACTTACAAAATGTAATTCTTTATAATGTCTCGTCTCTTCGTCTGGATTTTTTAGGTTATAACGCCCAAATTATTCAACGATCGGACAATACTTGTGAACTTACCATTAATGAACCGTTAAAAAACCAGGAAATATCCACAGGTAATATCAATATTAATTGCCCATTAAAAGATATTTACAATGAAATCAGGAGGTTAAACGTAATTTTTAGTTGTGGGACTGGAGATATCGTTGATCTATCCTCTCTGGACTTACGTAATGTCGATTTAGATTATTATGATTTCACAGATAAACATATGGCTAATACTATTTTAAATCCTTTTAAATTGAATTCAACAAATTTTACTAATGCCAACATGTTTCAGGTTAATTTTGTTAGTTCAACACAAAACGCCACAATCTCCTGGGATTATTTACTAAAAATAACGCCTGTTTTAATAAGCATTAGCGATATGTATTCTGAAGAAAAAATCAAGTTTGTCGAAAGTTGTTTAAATGAGCCTGGAGACATTACCGAAGAACAATTAAAAATTATGAGATTTGCAATTATAAAATCTATACCAAGGGCAACTCTTACAGATAAATTAGAAAATGAATTAACAAAAGAAATATATAAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCGGGGAATATAACACATATGAAGCATATAACTCAGAGAAGCAATATTTTACCAGAGAGGACTATACGTATGATTACGACCTTTTAAATGCAATATAG", - "dna_sequence_length": 1188, - "functions": [ - "pentapetide repeats-related protein" - ], - "id": "CDS_3069", - "location": [ - [ - "NC_000913", - 3268415, - "+", - 1188 - ] - ], - "md5": "bcb291b8619709b124ae5f2fc9638c37", - "parent_gene": "", - "protein_md5": "2ef88107c6f256199a64c83629f3e781", - "protein_translation": "MFPVSSIGNDISSDLVRRKMNDLPESPTGNNLEALAPGIEKLKQTSIEMVTLLNTLQPGGKCIITGDFQKELAYLQNVILYNVSSLRLDFLGYNAQIIQRSDNTCELTINEPLKNQEISTGNININCPLKDIYNEIRRLNVIFSCGTGDIVDLSSLDLRNVDLDYYDFTDKHMANTILNPFKLNSTNFTNANMFQVNFVSSTQNATISWDYLLKITPVLISISDMYSEEKIKFVESCLNEPGDITEEQLKIMRFAIIKSIPRATLTDKLENELTKEIYKSSSKIINCLNRIKLTEMKEFSSEKIYDYIDIIIEDYENTKENAYLVVPQINYTMDLNIEDSSSEELLSDNTLEKDENSPDNGFEVGEYNTYEAYNSEKQYFTREDYTYDYDLLNAI", - "protein_translation_length": 395, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947632" - ], - [ - "gene_synonym", - "NP_417593.4" - ], - [ - "gene_synonym", - "garK" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23524" - ], - [ - "gene_synonym", - "GI:145698314" - ], - [ - "gene_synonym", - "ASAP:ABE-0010271" - ], - [ - "gene_synonym", - "JW3093" - ], - [ - "gene_synonym", - "yhaD" - ], - [ - "gene_synonym", - "b3124" - ], - [ - "gene_synonym", - "EcoGene:EG11175" - ], - [ - "gene_synonym", - "ECK3112" - ] - ], - "dna_sequence": "ATGAAAATCGTAATCGCCCCAGACTCTTATAAAGAAAGTTTATCTGCCAGCGAGGTTGCGCAGGCGATAGAAAAAGGATTTCGGGAAATTTTTCCTGATGCACAGTACGTTTCTGTTCCGGTTGCCGACGGTGGCGAAGGAACGGTGGAAGCGATGATTGCAGCCACCCAGGGGGCTGAACGTCACGCCTGGGTTACAGGGCCGCTGGGCGAGAAAGTGAATGCCAGTTGGGGGATCTCCGGCGATGGCAAAACCGCGTTTATTGAAATGGCGGCGGCCAGTGGGCTGGAGCTGGTACCTGCGGAAAAACGCGATCCACTCGTGACCACTTCACGCGGCACAGGCGAGTTAATCCTGCAGGCGCTGGAGAGCGGTGCGACAAACATTATTATCGGCATTGGCGGCAGCGCTACAAATGATGGCGGCGCAGGCATGGTACAGGCGCTGGGGGCGAAATTATGCGACGCCAACGGCAATGAAATTGGTTTTGGCGGCGGTAGTCTTAATACTCTGAATGATATTGATATTTCCGGCCTCGATCCGCGCTTAAAAGATTGCGTCATTCGCGTCGCTTGTGATGTCACCAATCCGCTGGTGGGCGATAACGGCGCATCGCGCATCTTTGGCCCACAAAAGGGAGCCAGTGAAGCGATGATTGTTGAGCTGGACAATAACCTCTCTCACTATGCCGAGGTCATTAAAAAAGCGCTGCATGTTGATGTGAAAGATGTCCCCGGTGCAGGAGCTGCGGGTGGTATGGGCGCGGCGCTAATGGCGTTTCTTGGTGCGGAACTGAAAAGTGGTATTGAAATCGTCACTACGGCGCTGAATCTGGAGGAACATATTCACGATTGTACGCTGGTGATCACCGGTGAAGGGCGTATTGACAGCCAGAGTATTCACGGGAAGGTACCGATTGGTGTCGCAAACGTGGCGAAGAAGTACCATAAACCGGTGATTGGCATTGCGGGTAGCCTGACCGATGATGTTGGCGTTGTACATCAGCATGGCATTGATGCGGTCTTCAGCGTATTGACCAGCATAGGTACGTTGGACGAAGCATTCCGCGGGGCTTATGACAATATCTGCCGTGCTTCACGTAATATCGCCGCGACACTGGCGATTGGAATGCGCAACGCGGGGTGA", - "dna_sequence_length": 1146, - "functions": [ - "glycerate kinase I" - ], - "id": "CDS_3070", - "location": [ - [ - "NC_000913", - 3271770, - "-", - 1146 - ] - ], - "md5": "165cf802398437dbbd60f3be4229be34", - "parent_gene": "", - "protein_md5": "de7a1fa4cd3bfc3bb4937718ed6cfe88", - "protein_translation": "MKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSVPVADGGEGTVEAMIAATQGAERHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAEKRDPLVTTSRGTGELILQALESGATNIIIGIGGSATNDGGAGMVQALGAKLCDANGNEIGFGGGSLNTLNDIDISGLDPRLKDCVIRVACDVTNPLVGDNGASRIFGPQKGASEAMIVELDNNLSHYAEVIKKALHVDVKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTALNLEEHIHDCTLVITGEGRIDSQSIHGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVVHQHGIDAVFSVLTSIGTLDEAFRGAYDNICRASRNIAATLAIGMRNAG", - "protein_translation_length": 381, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947631" - ], - [ - "gene_synonym", - "ECK3113" - ], - [ - "gene_synonym", - "GI:145698315" - ], - [ - "gene_synonym", - "ASAP:ABE-0010273" - ], - [ - "gene_synonym", - "EcoGene:EG11176" - ], - [ - "gene_synonym", - "NP_417594.3" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABQ2" - ], - [ - "gene_synonym", - "b3125" - ], - [ - "gene_synonym", - "yhaE" - ], - [ - "gene_synonym", - "garR" - ], - [ - "gene_synonym", - "JW5526" - ] - ], - "dna_sequence": "ATGAAAGTTGGTTTTATTGGCCTGGGGATTATGGGTAAACCAATGAGTAAAAACCTTCTGAAAGCAGGTTACTCGCTGGTGGTTGCTGACCGTAACCCAGAAGCTATTGCTGACGTGATTGCTGCAGGTGCAGAAACAGCGTCTACGGCTAAAGCGATCGCTGAACAGTGCGACGTCATCATAACCATGCTGCCAAACTCCCCTCATGTGAAAGAGGTGGCGCTGGGTGAGAATGGCATTATTGAAGGCGCGAAGCCAGGTACGGTATTGATCGATATGAGTTCTATCGCACCGCTGGCAAGCCGTGAAATCAGCGAAGCGCTGAAAGCGAAAGGCATTGATATGCTGGATGCTCCGGTGAGCGGCGGTGAACCGAAAGCCATCGACGGTACGCTGTCAGTGATGGTGGGCGGCGACAAGGCTATTTTCGACAAATACTATGATTTGATGAAAGCGATGGCGGGTTCCGTGGTGCATACCGGGGAAATCGGTGCAGGTAACGTCACCAAACTGGCAAATCAGGTCATTGTGGCGCTGAATATTGCCGCGATGTCAGAAGCGTTAACGCTGGCAACTAAAGCGGGCGTTAACCCGGACCTGGTTTATCAGGCAATTCGCGGTGGACTGGCGGGCAGTACCGTGCTGGATGCCAAAGCGCCGATGGTGATGGACCGCAACTTCAAGCCGGGCTTCCGTATTGATCTGCATATTAAGGATCTGGCGAATGCGCTGGATACTTCTCACGGCGTCGGCGCACAACTGCCGCTCACAGCTGCGGTTATGGAGATGATGCAGGCACTGCGAGCAGATGGTTTAGGAACGGCGGATCATAGCGCCCTGGCGTGCTACTACGAAAAACTGGCGAAAGTCGAAGTTACTCGTTAA", - "dna_sequence_length": 885, - "functions": [ - "tartronate semialdehyde reductase" - ], - "id": "CDS_3071", - "location": [ - [ - "NC_000913", - 3272751, - "-", - 885 - ] - ], - "md5": "9575b72c63c643c71fe1c680c204fe3f", - "parent_gene": "", - "protein_md5": "328fc96a37dfb45d815016e902fc921c", - "protein_translation": "MKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGTADHSALACYYEKLAKVEVTR", - "protein_translation_length": 294, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "garL" - ], - [ - "gene_synonym", - "ECK3114" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23522" - ], - [ - "gene_synonym", - "ASAP:ABE-0010276" - ], - [ - "gene_synonym", - "NP_417595.1" - ], - [ - "gene_synonym", - "GeneID:947630" - ], - [ - "gene_synonym", - "JW3095" - ], - [ - "gene_synonym", - "GI:16131018" - ], - [ - "gene_synonym", - "yhaF" - ], - [ - "gene_synonym", - "b3126" - ], - [ - "gene_synonym", - "EcoGene:EG10016" - ] - ], - "dna_sequence": "ATGAATAACGATGTTTTCCCGAATAAATTCAAAGCCGCACTGGCTGCGAAACAGGTACAAATTGGTTGCTGGTCAGCACTCTCTAACCCGATTAGCACTGAAGTTCTTGGTTTGGCTGGGTTTGACTGGCTGGTGCTGGATGGCGAACATGCGCCAAACGATATCTCCACGTTTATTCCGCAGTTAATGGCCTTGAAAGGCAGCGCCAGCGCGCCAGTAGTGCGAGTGCCGACCAACGAGCCGGTAATTATTAAGCGTCTTCTGGATATCGGTTTCTATAACTTCCTGATTCCTTTTGTAGAAACAAAAGAGGAAGCAGAGCTGGCGGTGGCATCAACCCGTTACCCACCGGAAGGCATTCGCGGCGTCTCCGTTTCTCACCGCGCCAATATGTTTGGCACCGTGGCGGATTATTTCGCTCAGTCGAACAAGAACATCACTATTCTGGTCCAGATAGAAAGTCAGCAGGGCGTAGATAACGTCGATGCCATTGCCGCTACCGAAGGCGTAGACGGCATCTTCGTCGGCCCCAGCGATCTGGCCGCGGCATTAGGCCATCTCGGCAATGCATCACACCCGGATGTACAAAAAGCAATTCAGCACATTTTTAACCGTGCCAGCGCGCACGGCAAACCCAGCGGTATCCTCGCGCCGGTCGAAGCCGATGCGCGTCGTTATCTGGAATGGGGCGCGACGTTTGTGGCTGTCGGCAGCGATCTCGGCGTCTTCCGCTCTGCCACTCAGAAACTGGCTGATACCTTTAAAAAATAA", - "dna_sequence_length": 771, - "functions": [ - "alpha-dehydro-beta-deoxy-D-glucarate aldolase" - ], - "id": "CDS_3072", - "location": [ - [ - "NC_000913", - 3273557, - "-", - 771 - ] - ], - "md5": "f457d4712d606e693989461a0aabf876", - "parent_gene": "", - "protein_md5": "638f804e06ce31fe602a43c2d4c5e6b4", - "protein_translation": "MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAPVEADARRYLEWGATFVAVGSDLGVFRSATQKLADTFKK", - "protein_translation_length": 256, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3115" - ], - [ - "gene_synonym", - "NP_417596.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010279" - ], - [ - "gene_synonym", - "yhaU" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA80" - ], - [ - "gene_synonym", - "EcoGene:EG12760" - ], - [ - "gene_synonym", - "JW3096" - ], - [ - "gene_synonym", - "GI:16131019" - ], - [ - "gene_synonym", - "GeneID:947642" - ], - [ - "gene_synonym", - "b3127" - ], - [ - "gene_synonym", - "garP" - ] - ], - "dna_sequence": "ATGATTCTGGACACCGTTGACGAAAAAAAGAAAGGCGTGCATACCCGCTATTTAATATTACTGATTATTTTTATTGTTACCGCCGTTAACTACGCCGATCGTGCAACGCTGTCTATTGCTGGTACCGAAGTGGCAAAAGAGTTGCAGTTAAGTGCGGTTTCGATGGGTTACATCTTCTCCGCTTTTGGCTGGGCCTACTTGCTGATGCAAATCCCCGGCGGCTGGCTGCTTGATAAGTTTGGCTCGAAAAAAGTTTACACCTACAGCCTCTTTTTCTGGTCGCTATTCACCTTCCTGCAAGGCTTTGTTGATATGTTCCCGCTGGCCTGGGCAGGGATCTCCATGTTCTTTATGCGCTTTATGCTCGGCTTCTCGGAAGCGCCATCATTCCCGGCGAACGCCCGAATTGTCGCCGCCTGGTTCCCGACGAAAGAACGTGGTACTGCCTCCGCCATCTTTAACTCGGCGCAATATTTCTCGCTGGCGCTCTTTTCGCCGCTGCTTGGCTGGCTGACTTTCGCCTGGGGCTGGGAGCACGTCTTTACCGTTATGGGGGTGATTGGTTTTGTGCTGACGGCGCTGTGGATCAAGTTGATTCATAACCCGACAGATCACCCACGTATGTCTGCGGAAGAGCTGAAGTTTATCTCTGAAAATGGCGCGGTGGTCGATATGGACCACAAAAAGCCGGGCAGTGCGGCAGCAAGCGGACCCAAACTGCATTACATCAAGCAATTGCTCTCTAACCGCATGATGCTGGGCGTATTTTTCGGACAATATTTTATCAACACCATCACCTGGTTCTTCCTCACCTGGTTCCCGATTTATCTGGTGCAGGAAAAAGGCATGTCGATTCTGAAAGTGGGTCTGGTCGCCTCGATTCCAGCACTGTGTGGTTTTGCGGGCGGCGTGCTGGGAGGTGTCTTCTCGGATTATCTGATCAAACGCGGTTTATCCCTGACCCTGGCACGTAAGCTACCGATTGTGCTGGGAATGTTGCTGGCTTCCACCATCATCTTATGTAACTACACCAACAACACCACGCTGGTGGTCATGCTGATGGCGCTGGCTTTCTTTGGCAAAGGATTTGGTGCGCTGGGCTGGCCGGTGATTTCTGACACCGCGCCGAAAGAGATTGTTGGCCTCTGCGGCGGCGTCTTTAACGTCTTTGGCAATGTTGCCTCCATTGTCACTCCACTGGTGATTGGCTACCTGGTAAGTGAACTGCACTCCTTCAATGCAGCACTGGTTTTCGTGGGATGTTCAGCGCTGATGGCGATGGTCTGCTACCTCTTCGTAGTTGGCGACATTAAACGTATGGAATTGCAGAAATAA", 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[ - "gene_synonym", - "garD" - ], - [ - "gene_synonym", - "EcoGene:EG12522" - ], - [ - "gene_synonym", - "GI:16131020" - ], - [ - "gene_synonym", - "JW3097" - ], - [ - "gene_synonym", - "b3128" - ], - [ - "gene_synonym", - "NP_417597.1" - ], - [ - "gene_synonym", - "yhaG" - ], - [ - "gene_synonym", - "GeneID:947641" - ] - ], - "dna_sequence": "ATGGCCAACATCGAAATCAGACAAGAAACGCCAACTGCGTTTTATATAAAAGTTCACGACACAGATAATGTGGCAATTATTGTTAATGATAATGGCCTGAAAGCAGGAACGCGTTTTCCGGATGGGCTGGAATTAATTGAACATATTCCCCAGGGGCATAAAGTCGCATTGCTGGACATTCCGGCTAATGGTGAAATTATTCGTTATGGCGAAGTGATTGGTTACGCCGTGCGTGCAATCCCACGCGGAAGCTGGATCGACGAATCAATGGTTGTACTACCGGAAGCGCCGCCGTTACACACGCTGCCACTGGCAACCAAAGTCCCGGAACCCTTACCGCCGCTGGAAGGATACACCTTTGAGGGCTATCGCAATGCCGATGGCAGCGTGGGCACCAAAAACCTGCTCGGTATCACCACCAGCGTCCACTGTGTGGCAGGCGTGGTGGACTATGTAGTAAAAATCATTGAACGCGATCTGCTACCGAAATACCCGAACGTCGATGGCGTGGTGGGGCTGAATCATTTGTACGGTTGTGGCGTGGCGATTAACGCACCGGCGGCAGTTGTACCTATCCGTACCATTCACAATATTTCGCTGAATCCTAACTTTGGCGGCGAAGTAATGGTGATTGGCCTGGGTTGTGAAAAGTTGCAGCCTGAGCGCCTGCTGACTGGAACGGATGATGTGCAAGCTATTCCAGTAGAAAGCGCCAGCATTGTCAGTTTGCAGGATGAAAAGCATGTCGGTTTTCAGTCCATGGTCGAGGATATTTTGCAGATCGCCGAACGCCATCTACAAAAACTGAATCAACGGCAGCGAGAAACCTGCCCGGCTTCAGAACTGGTCGTTGGTATGCAGTGCGGTGGCAGCGATGCGTTTTCTGGTGTAACGGCAAACCCGGCGGTTGGCTATGCGTCTGATCTACTGGTGCGCTGCGGCGCAACGGTGATGTTTTCAGAAGTAACGGAAGTGCGTGACGCGATCCATCTGCTGACACCACGCGCAGTGAACGAAGAGGTCGGCAAACGGCTGCTGGAGGAGATGGAGTGGTACGATAACTATCTCAATATGGGAAAAACCGACCGCAGCGCCAACCCTTCGCCGGGCAACAAGAAAGGCGGTCTGGCAAACGTGGTAGAGAAGGCACTCGGCTCCATTGCTAAATCGGGTAAAAGCGCAATTGTTGAAGTGCTGTCGCCCGGTCAACGCCCGACTAAACGCGGATTAATTTACGCCGCGACGCCAGCCAGCGATTTTGTCTGTGGCACGCAACAGGTGGCTTCGGGTATCACAGTGCAAGTGTTTACGACCGGTCGTGGTACGCCGTACGGCCTGATGGCGGTACCCGTCATTAAAATGGCAACCCGCACCGAGCTGGCGAACCGCTGGTTTGATTTAATGGATATTAATGCGGGCACCATCGCTACCGGCGAAGAAACTATTGAAGAGGTGGGCTGGAAGTTGTTCCACTTTATTCTCGACGTCGCCAGCGGGAAGAAGAAAACCTTCTCGGATCAATGGGGGCTGCATAACCAGCTGGCGGTGTTTAACCCGGCACCGGTGACCTGA", 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- ], - [ - "gene_synonym", - "NP_417598.1" - ], - [ - "gene_synonym", - "GI:16131021" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15373" - ], - [ - "gene_synonym", - "b3129" - ], - [ - "gene_synonym", - "ASAP:ABE-0010287" - ], - [ - "gene_synonym", - "sohA" - ], - [ - "gene_synonym", - "prlF" - ], - [ - "gene_synonym", - "JW3098" - ], - [ - "gene_synonym", - "EcoGene:EG10955" - ] - ], - "dna_sequence": "ATGCCCGCTAATGCTCGCTCTCACGCTGTACTGACCACTGAATCAAAGGTCACGATACGCGGACAAACAACTATCCCCGCGCCAGTGCGTGAGGCCTTAAAACTGAAGCCAGGCCAGGACAGCATTCATTACGAAATTCTGCCTGGTGGGCAAGTATTTATGTGCCGACTGGGAGATGAACAGGAGGATCATACTATGAATGCATTTTTGCGTTTTCTGGATGCAGATATCCAGAACAACCCGCAAAAAACTCGTCCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAA", - "dna_sequence_length": 336, - "functions": [ - "antitoxin of the SohA(PrlF)-YhaV toxin-antitoxin system" - ], - "id": "CDS_3075", - "location": [ - [ - "NC_000913", - 3277002, - "+", - 336 - ] - ], - "md5": "192506492e52120d883bdf01976d1d3b", - "parent_gene": "", - "protein_md5": "cf28abc88718dd7facf01872314fd648", - "protein_translation": "MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGGQVFMCRLGDEQEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMDVNIDDEIGDDE", - "protein_translation_length": 111, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yhaV" - ], - [ - "gene_synonym", - "NP_417599.1" - ], - [ - "gene_synonym", - "ECK3118" - ], - [ - "gene_synonym", - "GI:16131022" - ], - [ - "gene_synonym", - "EcoGene:EG12761" - ], - [ - "gene_synonym", - "ASAP:ABE-0010289" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64594" - ], - [ - "gene_synonym", - "JW3099" - ], - [ - "gene_synonym", - "GeneID:947638" - ], - [ - "gene_synonym", - "b3130" - ] - ], - "dna_sequence": "ATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTTTTCAGGAAACCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTCTGGGAAAAATAAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGA", - "dna_sequence_length": 465, - "functions": [ - "toxin of the SohB(PrlF)-YhaV toxin-antitoxin system" - ], - "id": "CDS_3076", - "location": [ - [ - "NC_000913", - 3277337, - "+", - 465 - ] - ], - "md5": "430c0d7541ac158144695b0f6d6f8374", - "parent_gene": "", - "protein_md5": "3b82fd43f53b87a7714a44c33bdddfb9", - "protein_translation": "MDFPQRVNGWALYAHPCFQETYDALVAEVETLKGKDPENYQRKAATKLLAVVHKVIEEHITVNPSSPAFRHGKSLGSGKNKDWSRVKFGAGRYRLFFRYSEKEKVIILGWMNDENTLRTYGKKTDAYTVFSKMLKRGHPPADWETLTRETEETH", - "protein_translation_length": 154, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417600.1" - ], - [ - "gene_synonym", - "GeneID:947636" - ], - [ - "gene_synonym", - "yhaW" - ], - [ - "gene_synonym", - "EcoGene:EG12762" - ], - [ - "gene_synonym", - "ECK3119" - ], - [ - "gene_synonym", - "agaR" - ], - [ - "gene_synonym", - "GI:16131023" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACK2" - ], - [ - "gene_synonym", - "JW3100" - ], - [ - "gene_synonym", - "ASAP:ABE-0010291" - ], - [ - "gene_synonym", - "b3131" - ] - ], - "dna_sequence": "ATGAGTAATACCGACGCTTCAGGTGAGAAGCGAGTGACTGGCACCAGCGAGCGACGAGAACAGATCATTCAGCGTCTGCGACAGCAAGGGAGTGTGCAGGTTAACGATCTGTCGGCATTGTATGGCGTATCTACTGTGACGATCCGCAACGATCTGGCGTTTCTGGAAAAGCAGGGGATCGCTGTGCGTGCCTATGGTGGCGCGTTGATCTGCGATAGCACGACGCCGTCAGTCGAGCCATCAGTGGAAGATAAAAGCGCACTGAACACCGCGATGAAACGCAGCGTTGCGAAAGCTGCCGTTGAGTTGATTCAGCCAGGTCATCGGGTTATCCTCGATTCCGGGACCACCACTTTTGAGATTGCTCGTCTGATGCGCAAGCACACTGACGTAATTGCGATGACCAACGGTATGAACGTGGCTAATGCGTTGCTGGAAGCGGAAGGCGTTGAGCTGCTGATGACCGGCGGGCATTTGCGCCGTCAGTCGCAATCTTTTTACGGCGATCAGGCTGAGCAATCGCTGCAAAATTACCACTTCGATATGCTGTTTCTTGGTGTAGATGCGATCGATCTGGAGCGCGGCGTCAGCACACATAATGAAGATGAAGCTCGTTTAAACCGTCGGATGTGCGAAGTTGCGGAACGGATCATCGTGGTCACCGATTCCAGTAAGTTCAATCGTTCCAGTTTACATAAGATCATTGATACTCAACGTATCGACATGATCATTGTTGATGAAGGCATTCCTGCGGATAGCCTGGAAGGACTGCGAAAGGCTGGGGTTGAAGTGATTCTGGTCGGGGAGTGA", - "dna_sequence_length": 810, - "functions": [ - "transcriptional repressor of the aga regulon" - ], - "id": "CDS_3077", - "location": [ - [ - "NC_000913", - 3278665, - "-", - 810 - ] - ], - "md5": "ef65273affa13515bb25ae07ecd2e7c6", - "parent_gene": "", - "protein_md5": "ee2d2e7a80323569820151d9dbb37af8", - "protein_translation": "MSNTDASGEKRVTGTSERREQIIQRLRQQGSVQVNDLSALYGVSTVTIRNDLAFLEKQGIAVRAYGGALICDSTTPSVEPSVEDKSALNTAMKRSVAKAAVELIQPGHRVILDSGTTTFEIARLMRKHTDVIAMTNGMNVANALLEAEGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAIDLERGVSTHNEDEARLNRRMCEVAERIIVVTDSSKFNRSSLHKIIDTQRIDMIIVDEGIPADSLEGLRKAGVEVILVGE", - "protein_translation_length": 269, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yhaX" - ], - [ - "gene_synonym", - "NP_417601.1" - ], - [ - "gene_synonym", - "kbaZ" - ], - [ - "gene_synonym", - "GeneID:947637" - ], - [ - "gene_synonym", - "EcoGene:EG12763" - ], - [ - "gene_synonym", - "ECK3120" - ], - [ - "gene_synonym", - "GI:16131024" - ], - [ - "gene_synonym", - "JW3101" - ], - [ - "gene_synonym", - "ASAP:ABE-0010295" - ], - [ - "gene_synonym", - "agaZ" - ], - [ - "gene_synonym", - "b3132" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C8K0" - ] - ], - "dna_sequence": "GTGAAACATCTGACAGAAATGGTGAGACAGCACAAAGCGGGCAAAACAAATGGAATTTATGCCGTTTGTTCCGCACATCCGCTGGTGCTGGAAGCTGCAATCCGCTACGCCAGTGCAAACCAAACGCCGTTACTGATTGAAGCAACCTCCAATCAGGTAGACCAGTTCGGCGGTTATACCGGAATGACGCCCGCCGATTTTCGCGGCTTTGTTTGTCAGCTCGCCGACTCGTTGAATTTCCCGCAGGATGCGTTGATTCTGGGTGGTGACCATCTGGGGCCAAACCGCTGGCAAAACCTGCCGGCCGCTCAGGCAATGGCCAATGCCGATGATTTGATTAAAAGCTACGTTGCGGCAGGATTCAAAAAAATCCACCTTGATTGCAGCATGTCCTGTCAGGACGATCCGATTCCCTTAACTGATGACATCGTGGCTGAACGCGCCGCCCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGGATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGATCACACCAACGTTATTGATTATCAGCCCGCCAAAGCGAGCGCCTTAAGCCAGATGGTCGAAAACTACGAAACGCTGATTTTCGAAGCGCACTCTACCGATTATCAAACGCCGCAATCGCTGCGCCAGCTGGTGATTGACCACTTTGCCATTCTGAAAGTTGGCCCAGCGCTGACCTTCGCCCTGCGTGAAGCTCTGTTCTCTCTGGCGGCGATTGAAGAAGAACTGGTGCCAGCGAAAGCCTGTTCTGGTCTGCGTCAGGTGCTGGAAGACGTGATGCTCGACCGCCCGGAATACTGGCAAAGCCACTACCACGGTGACGGCAACGCGCGTCGTCTGGCGCGTGGTTATAGCTACTCGGATCGCGTGCGCTATTACTGGCCGGACAGCCAGATTGATGACGCTTTCGCTCATCTGGTACGTAATCTGGCGGATTCACCAATTCCGCTGCCGCTGATCAGCCAGTATCTGCCGCTGCAGTACGTGAAAGTTCGCTCCGGCGAGCTGCAGCCAACGCCACGGGAACTCATTATCAACCATATTCAGGACATCCTGGCGCAGTACCACACAGCCTGTGAAGGCCAATAA", 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"gene_synonym", - "EcoGene:EG12764" - ], - [ - "gene_synonym", - "ECK3121" - ], - [ - "gene_synonym", - "NP_417602.4" - ], - [ - "gene_synonym", - "JW3102" - ], - [ - "gene_synonym", - "GI:90111546" - ], - [ - "gene_synonym", - "ASAP:ABE-0010297" - ], - [ - "gene_synonym", - "b3133" - ], - [ - "gene_synonym", - "agaV" - ] - ], - "dna_sequence": "ATGCCAAATATTGTTTTAAGCCGGATTGATGAACGCTTGATTCACGGTCAGGTCGGCGTTCAATGGGTCGGATTTGCGGGGGCAAATCTGGTGCTGGTAGCCAACGATGAGGTTGCCGAAGATCCGGTACAACAAAACCTGATGGAAATGGTACTGGCAGAAGGGATCGCCGTACGTTTCTGGACGCTGCAAAAAGTTATCGACAACATTCATCGCGCCGCCGATCGACAGAAAATCCTGCTGGTTTGTAAAACACCCGCCGATTTCCTGACGCTGGTGAAAGGTGGCGTTCCGGTGAATCGCATTAACGTTGGCAATATGCACTACGCCAATGGCAAACAACAAATCGCCAAAACGGTTTCTGTGGATGCGGGCGATATCGCAGCATTTAACGACCTGAAAACCGCTGGGGTGGAATGCTTCGTTCAGGGCGTCCCGACAGAGCCTGCTGTGGACCTCTTTAAATTACTTTGA", - "dna_sequence_length": 474, - "functions": [ - "N-acetylgalactosamine-specific enzyme IIB component of PTS" - ], - "id": "CDS_3079", - "location": [ - [ - "NC_000913", - 3280217, - "+", - 474 - ] - ], - "md5": "32d9b17b4fd711eb5e297b1f07537da6", - "parent_gene": "", - "protein_md5": "42840e144b6695d5704ba5494f470c33", - "protein_translation": "MPNIVLSRIDERLIHGQVGVQWVGFAGANLVLVANDEVAEDPVQQNLMEMVLAEGIAVRFWTLQKVIDNIHRAADRQKILLVCKTPADFLTLVKGGVPVNRINVGNMHYANGKQQIAKTVSVDAGDIAAFNDLKTAGVECFVQGVPTEPAVDLFKLL", - "protein_translation_length": 157, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42905" - ], - [ - "gene_synonym", - "yhaZ" - ], - [ - "gene_synonym", - "GeneID:947647" - ], - [ - "gene_synonym", - "EcoGene:EG12765" - ], - [ - "gene_synonym", - "ECK3122" - ], - [ - "gene_synonym", - "agaW" - ], - [ - "gene_synonym", - "ASAP:ABE-0010299" - ], - [ - "gene_synonym", - "JW3103" - ], - [ - "gene_synonym", - "b3134" - ] - ], - "dna_sequence": "ATGGAAATCAGCCTGTTGCAGGCATTTGCGTTGGGCATTATCGCCTTTATCGCTGGCCTGGATATGTTTAACGGCCTAACCCATATGCACCGCCCGGTGGTCCTCGGCCCGTTGGTCGGGCTGGTACTTGGCGATCTGCATACCGGAATTTTAACCGGCGGTACGCTGGAACTGGTGTGGATGGGGCTGGCCCCGCTGGCGGGCGCACAGCCGCCTAACGTGATTATCGGTACTATCGTCGGCACGGCGTTTGCCATTACTACTGGCGTGAAACCCGATGTCGCAGTAGGTGTCGCCGTACCTTTCGCTGTCGCAGTACAGATGGGGATTACCTTCCTGTTCTCGGTGATGTCCGGCGTGATGTCTCGCTGCGAC", - "dna_sequence_length": 375, - "id": "CDS_3080", - "location": [ - [ - "NC_000913", - 3280701, - "+", - 375 - ] - ], - "md5": "744ca4e88843509140c7d333d9cd205f", - "parent_gene": "", - "protein_md5": "546dba07108dfc34bef8de5d2968d827", - "protein_translation": "MEISLLQAFALGIIAFIAGLDMFNGLTHMHRPVVLGPLVGLVLGDLHTGILTGGTLELVWMGLAPLAGAQPPNVIIGTIVGTAFAITTGVKPDVAVGVAVPFAVAVQMGITFLFSVMSGVMSRCD", - "protein_translation_length": 125, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42906" - ], - [ - "gene_synonym", - "agaA" - ], - [ - "gene_synonym", - "b3135" - ], - [ - "gene_synonym", 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"protein_md5": "b9571decaafecfd325f3dc9aeb822941", - "protein_translation": "ATWQQTRAAFDAGADGLVHCYNGMTGLHHREPGMVGAGLTDKRAWLELIADGHHVHPAAMSLCCCCAKERIVLITDAMQAAGMPDGRYTLCGEEVQMHGGVVRTASGGLAGSTLSVDAAVRNMVELTGVTPAEAIHMASLHPARMLGVDGVLGSLKPGKRASVVALDSGLHVQQIWIQGQLASF", - "protein_translation_length": 184, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42907" - ], - [ - "gene_synonym", - "EcoGene:EG12767" - ], - [ - "gene_synonym", - "ECK3124" - ], - [ - "gene_synonym", - "ASAP:ABE-0010305" - ], - [ - "gene_synonym", - "GeneID:947645" - ], - [ - "gene_synonym", - "agaS" - ], - [ - "gene_synonym", - "yraB" - ], - [ - "gene_synonym", - "JW3105" - ], - [ - "gene_synonym", - "b3136" - ], - [ - "gene_synonym", - "GI:16131028" - ], - [ - "gene_synonym", - "NP_417605.1" - ] - ], - "dna_sequence": "ATGCCAGAAAATTACACCCCTGCTGCCGCCGCAACCGGTACATGGACTGAAGAAGAGATCCGCCATCAGCCTCGCGCATGGATCCGTTCACTCACCAACATCGACGCGCTACGTTCCGCGCTCAATAACTTCCTTGAACCGTTACTGCGCAAAGAGAATCTGCGGATCATCCTGACCGGAGCCGGAACGTCGGCATTTATCGGTGACATCATCGCGCCGTGGCTCGCCAGCCATACCGGTAAAAACTTCAGCGCCGTACCGACCACCGATCTGGTCACCAATCCGATGGACTACCTGAACCCAGCTCATCCGCTGCTGTTGATCTCCTTCGGTCGATCCGGCAACAGCCCGGAAAGCGTCGCAGCCGTGGAACTGGCAAATCAATTTGTACCGGAATGCTATCACCTGCCGATCACCTGCAACGAAGCGGGCGCTCTTTACCAAAACGCGATCAACAGCGATAACGCGTTTGCCCTGCTGATGCCCGCAGAAACGCACGATCGCGGCTTTGCGATGACCAGCAGCATTACCACCATGATGGCCAGCTGCCTCGCGGTTTTCGCACCTGAGACGATCAACAGCCAAACCTTCCGCGACGTGGCGGATCGTTGCCAGGCGATCCTGACCTCACTGGGCGATTTCAGCGAAGGTGTGTTTGGTTACGCACCGTGGAAACGGATCGTTTATCTCGGTAGCGGTGGCTTACAGGGCGCAGCACGCGAGTCGGCGCTGAAAGTGCTGGAACTGACGGCGGGTAAACTGGCGGCCTTTTATGATTCTCCAACCGGATTCCGTCATGGACCAAAATCGCTGGTCGATGACGAAACGCTGGTGGTGGTATTTGTCTCCAGCCACCCTTACACCCGTCAGTATGATCTTGATCTGCTGGCTGAACTTCGCCGTGACAACCAGGCAATGCGTGTAATCGCCATCGCCGCGGAAAGCAGCGACATCGTCGCTGCCGGTCCACATATCATCCTGCCACCGTCACGTCACTTTATCGACGTTGAGCAGGCATTTTGCTTCCTGATGTACGCCCAGACGTTTGCACTGATGCAGTCGCTGCACATGGGCAATACGCCGGATACCCCATCAGCCAGTGGCACCGTTAACCGCGTGGTGCAAGGCGTAATCATTCATCCGTGGCAGGCATAA", 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- ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB74" - ], - [ - "gene_synonym", - "GeneID:947644" - ], - [ - "gene_synonym", - "JW3106" - ], - [ - "gene_synonym", - "NP_417606.1" - ], - [ - "gene_synonym", - "yraC" - ], - [ - "gene_synonym", - "GI:16131029" - ], - [ - "gene_synonym", - "b3137" - ], - [ - "gene_synonym", - "agaY" - ] - ], - "dna_sequence": "ATGAGCATTATCTCCACTAAATATCTGTTACAGGACGCCCAGGCCAATGGCTACGCGGTGCCTGCTTTTAACATTCATAACGCCGAGACGATCCAAGCGATCCTCGAAGTGTGCAGTGAAATGCGATCGCCGGTGATCCTCGCCGGAACGCCGGGGACCTTTAAACACATCGCGCTGGAAGAGATCTACGCCCTGTGTAGCGCCTATTCCACAACCTACAACATGCCACTGGCGCTGCATCTCGACCACCACGAATCGCTGGATGATATTCGCCGTAAAGTCCACGCAGGTGTGCGCAGTGCGATGATCGACGGCAGCCACTTCCCGTTTGCCGAGAACGTGAAGCTGGTGAAATCGGTTGTTGACTTCTGCCACTCACAAGATTGCAGCGTGGAAGCAGAACTGGGCCGCCTGGGCGGTGTTGAAGATGACATGAGCGTTGACGCCGAAAGTGCATTCCTGACCGATCCACAAGAAGCTAAACGCTTTGTCGAACTGACTGGCGTCGACAGCCTGGCGGTAGCGATTGGTACGGCGCACGGCTTATACAGCAAAACGCCGAAGATTGATTTCCAGCGGCTGGCGGAAATTCGTGAAGTGGTGGATGTTCCTCTGGTGCTGCATGGTGCCAGCGATGTTCCGGATGAATTTGTCCGTCGCACTATTGAACTTGGCGTCACAAAAGTGAACGTTGCCACAGAATTAAAAATAGCCTTCGCTGGCGCGGTTAAAGCCTGGTTTGCGGAAAATCCGCAGGGTAATGATCCTCGTTATTATATGCGCGTCGGAATGGATGCGATGAAAGAAGTTGTCAGAAATAAAATTAATGTCTGTGGTTCAGCGAATCGAATTTCAGCATAA", - "dna_sequence_length": 861, - "functions": [ - "tagatose 6-phosphate aldolase 1, kbaY subunit" - ], - "id": "CDS_3083", - "location": [ - [ - "NC_000913", - 3283143, - "+", - 861 - ] - ], - "md5": "0bdd36c5c1b07581019e67ee13128a86", - "parent_gene": "", - "protein_md5": "a514fa9e4b4a12f2acbee366f3c2ef85", - "protein_translation": "MSIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRISA", - "protein_translation_length": 286, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "agaB" - ], - [ - "gene_synonym", - "GI:16131030" - ], - [ - "gene_synonym", - "EcoGene:EG12769" - ], - [ - "gene_synonym", - "ASAP:ABE-0010310" - ], - [ - "gene_synonym", - "ECK3126" - ], - [ - "gene_synonym", - "GeneID:947653" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42909" - ], - [ - "gene_synonym", - "JW3107" - ], - [ - "gene_synonym", - "NP_417607.1" - ], - [ - "gene_synonym", - "b3138" - ], - [ - "gene_synonym", - "yraD" - ] - ], - "dna_sequence": "ATGACCAGTCCAAATATTCTCTTAACCCGTATTGATAACCGTCTGGTTCACGGTCAGGTTGGCGTGACCTGGACATCCACCATCGGTGCAAATCTGCTGGTAGTCGTGGATGATGTTGTCGCTAACGATGATATTCAACAGAAATTAATGGGTATTACCGCGGAAACCTACGGCTTTGGCATTCGTTTCTTTACTATCGAAAAAACCATTAACGTCATCGGCAAAGCTGCACCACATCAGAAGATCTTCCTGATTTGCCGTACGCCACAAACGGTACGTAAATTGGTAGAAGGTGGTATTGACCTGAAAGATGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATCAGCAGTAAAGTTTATGTCGATGACCAGGATCTCACGGACTTACGTTTTATTAAACAACGTGGCGTGAATGTTTTCATTCAGGACGTCCCTGGCGATCAAAAAGAACAAATCCCTGACTAA", - "dna_sequence_length": 477, - "functions": [ - "N-acetylgalactosamine-specific enzyme IIB component of PTS" - ], - "id": "CDS_3084", - "location": [ - [ - "NC_000913", - 3284170, - "+", - 477 - ] - ], - "md5": "fd38514c74db0907e8799d53f3edce59", - "parent_gene": "", - "protein_md5": "f099bffd72d19c88f44a6c676ea178bf", - "protein_translation": "MTSPNILLTRIDNRLVHGQVGVTWTSTIGANLLVVVDDVVANDDIQQKLMGITAETYGFGIRFFTIEKTINVIGKAAPHQKIFLICRTPQTVRKLVEGGIDLKDVNVGNMHFSEGKKQISSKVYVDDQDLTDLRFIKQRGVNVFIQDVPGDQKEQIPD", - "protein_translation_length": 158, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "agaC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42910" - ], - [ - "gene_synonym", - "yraE" - ], - [ - "gene_synonym", - "GeneID:947652" - ], - [ - "gene_synonym", - "ECK3127" - ], - [ - "gene_synonym", - "GI:16131031" - ], - [ - "gene_synonym", - "EcoGene:EG12770" - ], - [ - "gene_synonym", - "ASAP:ABE-0010312" - ], - [ - "gene_synonym", - "b3139" - ], - [ - "gene_synonym", - "NP_417608.1" - ], - [ - "gene_synonym", - "JW3108" - ] - ], - "dna_sequence": "ATGCATGAAATAACCCTACTTCAGGGATTATCCCTGGCGGCGTTAGTTTTTGTTCTGGGGATTGATTTTTGGCTGGAAGCCTTATTTTTATTCCGCCCGATAATCGTTTGTACCCTAACTGGCGCTATTCTCGGTGATATTCAGACTGGCTTAATTACCGGTGGTCTGACAGAGTTGGCTTTCGCCGGATTAACCCCTGCAGGTGGTGTTCAGCCGCCCAACCCGATTATGGCGGGTCTGATGACCACCGTCATTGCATGGTCTACGGGCGTTGATGCCAAAACAGCAATTGGTCTTGGCCTGCCGTTTAGTTTGTTAATGCAGTACGTCATTCTGTTCTTCTATTCCGCTTTCTCATTATTTATGACCAAAGCCGATAAATGCGCGAAAGAGGCGGATACGGCAGCGTTTTCCCGGCTTAACTGGACAACGATGCTCATCGTCGCTTCAGCGTATGCGGTGATTGCTTTCCTCTGTACTTACCTGGCACAGGGGGCGATGCAGGCGCTGGTGAAAGCGATGCCCGCCTGGCTGACCCACGGCTTTGAAGTGGCTGGCGGTATTCTGCCTGCCGTTGGTTTTGGCTTGCTGCTGCGCGTAATGTTCAAAGCGCAATATATCCCTTACCTGATCGCCGGTTTCCTGTTTGTTTGCTACATCCAGGTCAGCAACCTGTTGCCGGTTGCCGTACTGGGCGCAGGCTTTGCGGTGTATGAGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATGAAGAAGAGGACTACAGCAATGGGATCTGA", - "dna_sequence_length": 804, - "functions": [ - "N-acetylgalactosamine-specific enzyme IIC component of PTS" - ], - "id": "CDS_3085", - "location": [ - [ - "NC_000913", - 3284685, - "+", - 804 - ] - ], - "md5": "e9909eb162ba65ff1c792c20947a833f", - "parent_gene": "", - "protein_md5": "135508bea4e52908ac79bdb356013219", - "protein_translation": "MHEITLLQGLSLAALVFVLGIDFWLEALFLFRPIIVCTLTGAILGDIQTGLITGGLTELAFAGLTPAGGVQPPNPIMAGLMTTVIAWSTGVDAKTAIGLGLPFSLLMQYVILFFYSAFSLFMTKADKCAKEADTAAFSRLNWTTMLIVASAYAVIAFLCTYLAQGAMQALVKAMPAWLTHGFEVAGGILPAVGFGLLLRVMFKAQYIPYLIAGFLFVCYIQVSNLLPVAVLGAGFAVYEFFNAKSRQQAQPQPVASKNEEEDYSNGI", - "protein_translation_length": 267, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42911" - ], - [ - "gene_synonym", - "GeneID:947649" - ], - [ - "gene_synonym", - "ECK3128" - ], - [ - "gene_synonym", - "agaD" - ], - [ - "gene_synonym", - "EcoGene:EG12771" - ], - [ - "gene_synonym", - "b3140" - ], - [ - "gene_synonym", - "GI:16131032" - ], - [ - "gene_synonym", - "JW3109" - ], - [ - "gene_synonym", - "yraF" - ], - [ - "gene_synonym", - "NP_417609.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010314" - ] - ], - "dna_sequence": "ATGGGATCTGAAATCAGTAAAAAAGATATCACCCGTCTGGGCTTTCGTTCGTCGCTGCTGCAAGCGAGCTTTAACTACGAAAGGATGCAGGCGGGCGGTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCTTAAGCGCGGCGATGAAAGATAACCTCGAATTTATTAATACCCACCCGAATCTGGTCGGATTCCTGATGGGGTTATTAATTTCGATGGAAGAAAAAGGAGAAAACCGCGACACCATTAAAGGCCTCAAAGTGGCACTGTTTGGCCCAATCGCCGGGATTGGCGATGCGATTTTCTGGTTTACTTTGTTGCCGATTATGGCGGGAATTTGCTCATCATTTGCCAGCCAGGGAAACCTGCTGGGGCCGATTCTATTTTTCGCCGTTTACCTGCTTATCTTTTTCCTGCGCGTCGGCTGGACCCACGTCGGTTATTCAGTCGGCGTGAAGGCGATCGATAAAGTGCGAGAGAACTCGCAGATGATTGCCCGTTCGGCAACCATCCTCGGGATCACGGTAATCGGCGGGCTGATCGCTTCGTATGTGCATATTAACGTGGTGACATCGTTTGCCATCGACAATACCCACAGCGTTGCGCTGCAGCAGGATTTCTTCGATAAAGTCTTCCCGAACATTTTACCGATGGCCTACACCCTGCTGATGTATTACTTCCTGCGGGTGAAAAAAGCGCATCCGGTGCTGTTAATCGGCGTGACTTTTGTGCTCTCTATTGTTTGTTCCGCATTCGGCATTTTGTAA", - "dna_sequence_length": 792, - "functions": [ - "N-acetylgalactosamine-specific enzyme IID component of PTS" - ], - "id": "CDS_3086", - "location": [ - [ - "NC_000913", - 3285478, - "+", - 792 - ] - ], - 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"ATGGAACGAGGCACTGCGTCTGGTGGTGCCTCTTTACTTAAGGAATTTCATCCTGTGCAAACCCTTCAGCAAGTTGAAAACTATACGGCGTTAAGTGAACGTGCCAGCGAATATTTATTGGCCGTGATCCGTAGCAAACCGAATGCCGTGATTTGCCTGGCGACCGGAGCCACGCCATTACTGACGTATCATTATCTGGTAGAAAAAATCCACCAGCAGCAGGTTGATGTCAGCCAGCTCACCTTCGTGAAGCTCGACGAATGGGTGGATCTGCCATTAACGATGCCAGGCACCTGCGAAACTTTCCTGCAACAGCATATCGTGCAGCCGCTGGGGCTACGTGAAGACCAGCTCATCAGCTTTCGCTCCGAAGAGATAAATGAGACAGAGTGCGAACGGGTAACGAACCTGATTGCGCGCAAAGGCGGTCTGGATTTATGCGTTCTCGGATTGGGGAAAAACGGTCATCTTGGGCTGAACGAACCGGGAGAAAGCCTGCAACCGGCCTGCCATATCAGTCAACTTGATGCCAGAACACAGCAACATGAGATGTTAAAAACCGCGGGTCGCCCCGTGACTCGTGGGATCACCTTAGGCCTGAAGGATATTCTCAATGCCCGCGAAGTTTTGTTACTGGTGACTGGCGAAGGAAAGCAGGATGCGACAGATCGTTTTCTCACGGCTAAAGTCTCTACCGCTATCCCGGCTTCATTTTTATGGCTGCACAGTAACTTTATTTGTTTAATTAACACCTAA", - "dna_sequence_length": 756, - "functions": [ - "galactosamine-6-phosphate isomerase" - ], - "id": "CDS_3087", - "location": [ - [ - "NC_000913", - 3286270, - "+", - 756 - ] - ], - "md5": "f896088ae3ec993f93589328710a6708", - "parent_gene": "", - "protein_md5": "c946773f9b258681724ad4434bc73d20", - "protein_translation": "MERGTASGGASLLKEFHPVQTLQQVENYTALSERASEYLLAVIRSKPNAVICLATGATPLLTYHYLVEKIHQQQVDVSQLTFVKLDEWVDLPLTMPGTCETFLQQHIVQPLGLREDQLISFRSEEINETECERVTNLIARKGGLDLCVLGLGKNGHLGLNEPGESLQPACHISQLDARTQQHEMLKTAGRPVTRGITLGLKDILNAREVLLLVTGEGKQDATDRFLTAKVSTAIPASFLWLHSNFICLINT", - "protein_translation_length": 251, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3130" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42913" - ], - [ - "gene_synonym", - "JW3111" - ], - [ - "gene_synonym", - "GeneID:947658" - ], - [ - "gene_synonym", - "GI:16131034" - ], - [ - "gene_synonym", - "b3142" - ], - [ - "gene_synonym", - "NP_417611.1" - ], - [ - "gene_synonym", - "yraH" - ], - [ - "gene_synonym", - "ASAP:ABE-0010325" - ], - [ - "gene_synonym", - "EcoGene:EG12773" - ] - ], - "dna_sequence": "ATGAATAAAGTTACAAAAACAGCTATTGCGGGCTTACTTGCGCTTTTCGCAGGTAATGCCGCTGCAACCGATGGTGAAATAGTTTTTGATGGCGAGATTTTAAAATCCGCTTGTGAAATCAATGACTCTGATAAGAAAATTGAAGTTGCTCTTGGTCACTATAATGCCGAACAGTTTCGTAATATTGGCGAGCGTAGCCCAAAAATTCCATTCACTATTCCTTTAGTTAACTGCCCAATGACTGGGTGGGAGCACGATAACGGCAACGTTGAAGCGTCTTTCCGTCTATGGCTGGAAACGCGAGATAATGGCACCGTCCCTAACTTCCCTAATCTGGCAAAAGTAGGCTCTTTTGCTGGCATAGCGGCAACAGGTGTGGGTATCCGTATTGACGATGCGGAAAGCGGAAACATTATGCCACTGAATGCTATGGGCAATGATAACACGGTTTATCAGATCCCGGCGGAATCCAATGGTATTGTCAATGTTGACCTCATCGCTTACTACGTATCAACCGTAGTTCCATCAGAAATCACCCCAGGGGAAGCAGACGCTATCGTTAACGTAACGCTGGATTACCGTTAA", - "dna_sequence_length": 585, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_3088", - "location": [ - [ - "NC_000913", - 3287426, - "+", - 585 - ] - ], - "md5": "1216d033eb1c7aebd856c0b2203373bd", - "parent_gene": "", - "protein_md5": "2ddd5d3ced6bd1964b5de3e768fb55dc", - "protein_translation": "MNKVTKTAIAGLLALFAGNAAATDGEIVFDGEILKSACEINDSDKKIEVALGHYNAEQFRNIGERSPKIPFTIPLVNCPMTGWEHDNGNVEASFRLWLETRDNGTVPNFPNLAKVGSFAGIAATGVGIRIDDAESGNIMPLNAMGNDNTVYQIPAESNGIVNVDLIAYYVSTVVPSEITPGEADAIVNVTLDYR", - "protein_translation_length": 194, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3131" - ], - [ - "gene_synonym", - "GeneID:947657" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42914" - ], - [ - "gene_synonym", - "NP_417612.1" - ], - [ - "gene_synonym", - "EcoGene:EG12774" - ], - [ - "gene_synonym", - "JW3112" - ], - [ - "gene_synonym", - "ASAP:ABE-0010331" - ], - [ - "gene_synonym", - "b3143" - ], - [ - "gene_synonym", - "GI:16131035" - ], - [ - "gene_synonym", - "yraI" - ] - ], - "dna_sequence": "ATGTCAAAACGAACATTCGCGGTGATATTAACCTTGTTGTGTAGCTTCTGTATTGGCCAGGCGCTTGCAGGAGGAATCGTTTTACAGCGAACGCGAGTGATCTATGATGCCAGCCGCAAAGAGGCTGCGTTACCTGTCGCAAACAAAGGCGCAGAAACGCCTTATTTACTGCAATCATGGGTAGATAATATAGATGGTAAAAGCCGTGCCCCATTTATTATAACCCCACCGCTATTTCGTCTTGAGGCTGGCGATGACTCATCACTGCGAATTATTAAAACAGCTGATAACCTGCCTGAAAATAAAGAGTCGCTGTTCTACATTAATGTTCGTGCCATTCCAGCAAAGAAAAAATCAGATGATGTTAATGCTAACGAGTTGACGCTGGTATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCCAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCTGCGATCAATGATTATGGCGGCAGTTCCGGGACAGAAACTCGTCCACTGCAATAA", - "dna_sequence_length": 696, - "functions": [ - "putative periplasmic pilin chaperone" - ], - "id": "CDS_3089", - "location": [ - [ - "NC_000913", - 3288090, - "+", - 696 - ] - ], - "md5": "3f4a478b0e592947acf24fd8d5be3817", - "parent_gene": "", - "protein_md5": "42f411ca14278794ea5de37c9f2580c2", - "protein_translation": "MSKRTFAVILTLLCSFCIGQALAGGIVLQRTRVIYDASRKEAALPVANKGAETPYLLQSWVDNIDGKSRAPFIITPPLFRLEAGDDSSLRIIKTADNLPENKESLFYINVRAIPAKKKSDDVNANELTLVFKTRIKMFYRPAHLKGRVNDAWKSLEFKRSDHSLNIYNPTEYYVVFAGLAVDKTDLTSKIEYIAPGEHKQLPLPASGGKNVKWAAINDYGGSSGTETRPLQ", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131036" - ], - [ - "gene_synonym", - "GeneID:947656" - ], - [ - "gene_synonym", - "b3144" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P42915" - ], - [ - "gene_synonym", - "NP_417613.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010333" - ], - [ - "gene_synonym", - "EcoGene:EG12775" - ], - [ - "gene_synonym", - "JW3113" - ], - [ - "gene_synonym", - "yraJ" - ], - [ - "gene_synonym", - "ECK3132" - ] - ], - "dna_sequence": "ATGCCACAACGACACCACCAGGGACATAAACGCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCACTGTACCGTGATGCAAGAGGTTACGTCTCCCCTTCTCGTTGGGACGATGGTATACCAACGCTGTTTACCAACTACTCGTTTACAGGTTCTGATAACCGTTACCGCCAGGGCAATCGTAGCCAACGACAGTACCTGAATATGCAAAATGGTGCTAATTTTGGCCCCTGGCGATTACGCAACTATTCCACATGGACACGCAACGATCAGACATCAAGCTGGAATACCATCAGTAGTTATTTACAACGTGATATCAAGGCGTTGAAGTCTCAGTTGCTTCTGGGAGAAAGCGCCACCAGCGGCAGTATTTTTTCCAGCTACACCTTTACTGGCGTGCAACTCGCTTCCGACGATAATATGTTGCCAAACAGCCAGCGCGGATTTGCCCCAACGGTACGCGGTATCGCAAACAGTAGTGCAATCGTGACTATCAGGCAAAATGGTTATGTGATCTATCAAAGCAACGTGTCAGCGGGTGCCTTTGAAATTAACGATCTCTACCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGATTATTATGCGCTGGGGATCGGTATCGGCGGCACACTTGGCGCACTGGGCGCGTTGTCGATGGATATCAACAGAGCTGACACCCAATTCGATAACCAGCACTCTTTTCATGGCTATCAATGGCGTACGCAGTACATCAAAGATATCCCGGAAACCAACACCAATATCGCTGTCAGCTACTATCGCTATACCAACGATGGCTATTTTAGTTTTAATGAAGCCAATACCCGCAATTGGGACTATAACAGTCGCCAAAAAAGTGAAATTCAATTCAACATCAGCCAGACAATATTTGATGGGGTAAGTCTGTATGCCTCCGGTTCGCAGCAAGACTATTGGGGCAATAACGATAAAAACAGGAATATCTCTGTTGGGGTTTCCGGCCAGCAATGGGGAGTTGGTTACAGCCTGAATTATCAATACAGCCGCTACACTGATCAAAATAATGACCGCGCACTCTCTTTGAATCTCAGTATTCCGTTAGAACGCTGGTTACCGCGTAGCCGGGTTTCCTATCAGATGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGATAACGTCGATCTTGAACAAACAACACAGTTTGTGGTGCCCAACAGAGGTGCAATGGTAGCGGCGCGTTTCAACGCCAATATCGGTTATCGCGTACTTGTTACAGTCAGCGATCGCAACGGTAAACCGTTGCCCTTTGGCGCTCTTGCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAA", - "dna_sequence_length": 2517, - "functions": [ - "putative outer membrane protein" - ], - "id": "CDS_3090", - "location": [ - [ - "NC_000913", - 3288814, - "+", - 2517 - ] - ], - "md5": "db7224e306848654dcc990da32a40547", - "parent_gene": "", - "protein_md5": "88e23865e756e26a93d203bfb46001d7", - "protein_translation": "MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYYFDPIMLETTKSGMQTTDLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQLLQPQFTVEQLRELGIKVDEIPALAEKDDDSVINSLEQIIPGTAAEFDFNHQQLNLSIPQIALYRDARGYVSPSRWDDGIPTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPWRLRNYSTWTRNDQTSSWNTISSYLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSSAIVTIRQNGYVIYQSNVSAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYSSLPMMQRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYGGLLGSEDYYALGIGIGGTLGALGALSMDINRADTQFDNQHSFHGYQWRTQYIKDIPETNTNIAVSYYRYTNDGYFSFNEANTRNWDYNSRQKSEIQFNISQTIFDGVSLYASGSQQDYWGNNDKNRNISVGVSGQQWGVGYSLNYQYSRYTDQNNDRALSLNLSIPLERWLPRSRVSYQMTSQKDRPTQHEMRLDGSLLDDGRLSYSLEQSLDDDNNHNSSLNASYRSPYGTFSAGYSYGNDSSQYNYGVTGGVVIHPHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPFGYAVVPYLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNRGAMVAARFNANIGYRVLVTVSDRNGKPLPFGALASNDDTGQQSIVDEGGILYLSGISSKSQSWTVRWGNQADQQCQFAFSTPDSEPTTSVLQGTAQCH", - "protein_translation_length": 838, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947654" - ], - [ - "gene_synonym", - "ECK3133" - ], - [ - "gene_synonym", - "GI:16131037" - ], - [ - "gene_synonym", - "NP_417614.1" - ], - [ - "gene_synonym", - "b3145" - ], - [ - "gene_synonym", - "JW3114" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P43319" - ], - [ - "gene_synonym", - "ASAP:ABE-0010335" - ], - [ - "gene_synonym", - "yraK" - ], - [ - "gene_synonym", - "EcoGene:EG12776" - ] - ], - "dna_sequence": "ATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTGCGGGTAAGGCAGTTAAACTTGTCTATATGGTCAGCCCCGTACTTACCACCACTGGACATCAGACAGGATATTACAAACTCAATGACAGCCTGGATATTAAAACCACATTACAGGCAAACGACATTCCAGGACTCACAACCGACCAGGTTGTCTCTGTTAACACCCGATTCACACAGATAAAAAACAACACGGTATATTCTGCTGCAACCCAAACGGGTGTTTGCCAGGGTGATACGTCTCGTTATGGACCCGTTAATATTGGTGCGAACACCACCTTTACCCTGTATGTCACCAAGCCATTTCTCGGCTCGATGACCATTCCGAAAACGGATATTGCCGTCATTAAAGGCGCGTGGGTCGATGGAATGGGAAGCCCGTCTACAGGTGACTTCCATGATTTAGTCAAGTTATCGATTCAGGGAAATCTCACCGCCCCACAGTCGTGCAAAATTAATCAGGGCGATGTTATTAAGGTTAATTTTGGATTCATCAATGGTCAGAAGTTTACCACCCGCAATGCCATGCCAGACGGTTTTACTCCAGTAGACTTTGATATCACTTATGACTGTGGTGATACTTCAAAGATTAAAAACTCGTTGCAAATGCGCATCGACGGTACAACTGGGGTAGTAGACCAGTACAACCTGGTCGCCAGGCGAAGAAGTTCAGACAATGTGCCCGATGTCGGTATTCGTATTGAAAATCTCGGCGGCGGAGTTGCAAATATTCCTTTTCAGAACGGTATCCTTCCCGTTGATCCTTCCGGGCATGGCACCGTCAATATGCGCGCCTGGCCAGTTAATCTGGTCGGTGGTGAGCTGGAAACAGGAAAATTTCAGGGCACAGCCACCATTACCGTCATCGTGCGGTAA", - "dna_sequence_length": 1092, - "functions": [ - "putative fimbrial-like adhesin protein" - ], - "id": "CDS_3091", - "location": [ - [ - "NC_000913", - 3291341, - "+", - 1092 - ] - ], - "md5": "c42b41fa73cd0c41152964838d3b987d", - "parent_gene": "", - "protein_md5": "ec519397f90fedbe20f6c18a5ec78168", - "protein_translation": "MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVTVNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKLNDSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKNNTVYSAATQTGVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGDFHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITYDCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQNGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVIVR", - "protein_translation_length": 363, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947664" - ], - [ - "gene_synonym", - "EcoGene:EG12777" - ], - [ - "gene_synonym", - "ECK3134" - ], - [ - "gene_synonym", - "b3146" - ], - [ - "gene_synonym", - "rsmI" - ], - [ - "gene_synonym", - "ASAP:ABE-0010337" - ], - [ - "gene_synonym", - "JW3115" - ], - [ - "gene_synonym", - "NP_417615.1" - ], - [ - "gene_synonym", - "yraL" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67087" - ], - [ - "gene_synonym", - "GI:16131038" - ] - ], - "dna_sequence": "ATGAAACAACACCAATCGGCGGATAATTCTCAGGGCCAGCTTTACATTGTACCGACGCCAATCGGCAATCTGGCGGATATCACCCAGCGTGCGTTAGAGGTATTACAGGCCGTTGATCTGATTGCCGCCGAGGATACTCGTCACACCGGTTTATTGCTGCAACATTTTGGGATTAATGCCCGGTTGTTTGCGCTGCACGACCATAACGAACAACAAAAAGCTGAAACGCTGCTGGCGAAGCTGCAAGAGGGGCAAAACATTGCGCTGGTTTCCGATGCCGGAACGCCGCTAATTAACGATCCTGGCTACCATCTGGTGCGTACCTGCCGTGAAGCGGGGATCCGCGTGGTGCCGCTACCCGGGCCGTGTGCTGCTATCACTGCGTTAAGCGCAGCGGGTTTACCCTCTGACCGTTTCTGTTACGAAGGCTTTTTACCTGCCAAATCAAAAGGCCGCCGTGATGCGCTAAAAGCCATTGAAGCGGAGCCGCGCACGCTGATTTTTTATGAATCTACCCACCGTCTGTTAGATAGCCTGGAAGATATCGTTGCGGTATTAGGCGAATCCCGCTACGTGGTTCTGGCGCGTGAGCTGACCAAAACCTGGGAAACCATTCACGGCGCGCCCGTTGGCGAGCTGCTGGCGTGGGTAAAGGAAGATGAAAACCGTCGCAAAGGCGAAATGGTGCTGATTGTCGAAGGTCATAAAGCACAGGAAGAAGACTTACCCGCCGATGCCCTGCGCACGCTGGCGCTGCTACAGGCAGAACTGCCGCTGAAAAAAGCGGCGGCGCTGGCCGCAGAAATTCACGGCGTGAAGAAAAATGCGCTGTATAAGTATGCGCTGGAGCAGCAGGGGTAA", - "dna_sequence_length": 861, - "functions": [ - "16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent" - ], - "id": "CDS_3092", - "location": [ - [ - "NC_000913", - 3293335, - "-", - 861 - ] - ], - "md5": "dc39b2f14babac4f785e84becd9b79b0", - "parent_gene": "", - "protein_md5": "455e664b1c8fe97fa200485a1d5a212b", - "protein_translation": "MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIVEGHKAQEEDLPADALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQG", - "protein_translation_length": 286, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3135" - ], - [ - "gene_synonym", - "b3147" - ], - [ - "gene_synonym", - "EcoGene:EG12778" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45464" - ], - [ - "gene_synonym", - "JW3116" - ], - [ - "gene_synonym", - "GeneID:947663" - ], - [ - "gene_synonym", - "yraM" - ], - [ - "gene_synonym", - "ASAP:ABE-0010343" - ], - [ - "gene_synonym", - "NP_417616.1" - ], - [ - "gene_synonym", - "lpoA" - ], - [ - "gene_synonym", - "GI:16131039" - ] - ], - "dna_sequence": "ATGGTACCCTCAACATTTTCTCGTTTGAAAGCCGCGCGTTGTCTGCCTGTTGTTCTGGCAGCCCTGATTTTCGCCGGTTGTGGCACCCATACTCCCGATCAGTCCACTGCTTATATGCAGGGCACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGTGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAAAACACTGCTGGCGGTAGAGATTAAACTGGCGCAGAAAGATTTTGCTGGCGCGCAAAACTTGCTGGCGAAAATCACACCTGCCGATTTAGAACAAAACCAGCAAGCGCGTTACTGGCAGGCAAAAATCGATGCCAGCCAGGGGCGTCCTTCCATTGATTTACTGCGCGCGTTAATTGCTCAGGAACCGCTGCTTGGCGCGAAAGAAAAACAGCAGAATATTGATGCCACCTGGCAGGCGCTCTCCTCCATGACTCAGGAACAGGCGAATACGCTGGTGATCAACGCCGACGAAAATATTCTGCAAGGCTGGCTGGATCTGCAGCGCGTCTGGTTTGATAACCGTAACGATCCCGACATGATGAAAGCCGGGATCGCCGACTGGCAGAAACGTTATCCGAACAATCCGGGCGCGAAAATGCTGCCAACGCAGTTGGTTAACGTAAAAGCGTTTAAACCAGCCTCGACCAACAAAATCGCCCTGCTGTTGCCACTGAATGGCCAGGCAGCGGTATTTGGTCGCACTATTCAGCAAGGCTTTGAAGCGGCGAAAAATATCGGCACTCAGCCAGTGGCAGCTCAGGTAGCTGCCGCACCTGCCGCAGACGTAGCTGAACAACCTCAGCCGCAAACCGTGGATGGCGTTGCCAGCCCGGCACAAGCCTCGGTTAGCGATCTGACCGGTGAACAGCCTGCAGCCCAGCCGGTGCCTGTAAGCGCCCCGGCGACAAGCACCGCAGCGGTAAGCGCACCCGCAAATCCATCCGCAGAGCTGAAAATCTACGATACCTCATCACAACCACTTAGCCAGATCTTAAGCCAGGTTCAGCAGGATGGCGCGAGTATTGTGGTCGGTCCGTTGCTGAAAAATAACGTTGAAGAGTTGCTGAAGAGCAACACTCCGCTGAACGTACTGGCACTGAACCAGCCGGAGAATATCGAAAATCGCGTCAATATTTGTTACTTCGCGCTTTCACCGGAAGACGAAGCGCGCGATGCAGCGCGTCATATTCGTGACCAGGGTAAACAAGCGCCGCTGGTGCTGATCCCACGCAGTTCATTGGGCGATCGCGTAGCCAATGCGTTTGCGCAAGAGTGGCAGAAACTGGGCGGCGGCACCGTTCTGCAACAAAAATTTGGTTCCACCAGCGAATTACGCGCGGGTGTTAACGGCGGTTCTGGTATTGCTTTAACGGGTAGCCCGATTACTCTCAGAGCGACAACCGACTCCGGCATGACGACCAACAATCCAACGCTGCAAACCACGCCAACCGATGACCAGTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACGATTATTCACTGGCTCGCATGTATGCGATGGGCGTCGATGCCTGGTCGCTGGCAAATCATTTCTCACAAATGCGCCAGGTTCAGGGTTTTGAAATCAACGGTAATACCGGAAGCCTGACGGCTAACCCGGATTGCGTGATTAACAGGAACTTATCATGGCTACAGTACCAACAAGGTCAGGTAGTCCCCGTCAGTTAA", - "dna_sequence_length": 2037, - "functions": [ - "OM lipoprotein stimulator of MrcA transpeptidase" - ], - "id": "CDS_3093", - "location": [ - [ - "NC_000913", - 3293400, - "+", - 2037 - ] - ], - "md5": "f57338928a6b32ab98013cbdd62424cd", - "parent_gene": "", - "protein_md5": "d121d690f3a9d11994e53d9c566f1663", - "protein_translation": "MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDAQRREKTLLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIAQEPLLGAKEKQQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPAADVAEQPQPQTVDGVASPAQASVSDLTGEQPAAQPVPVSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGSPITLRATTDSGMTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGATLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRNLSWLQYQQGQVVPVS", - "protein_translation_length": 678, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131040" - ], - [ - "gene_synonym", - "EcoGene:EG12779" - ], - [ - "gene_synonym", - "NP_417617.1" - ], - [ - "gene_synonym", - "ECK3136" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45465" - ], - [ - "gene_synonym", - "JW3117" - ], - [ - "gene_synonym", - "b3148" - ], - [ - "gene_synonym", - "yraN" - ], - [ - "gene_synonym", - "GeneID:947662" - ], - [ - "gene_synonym", - "ASAP:ABE-0010346" - ] - ], - "dna_sequence": "ATGGCTACAGTACCAACAAGGTCAGGTAGTCCCCGTCAGTTAACCACCAAACAGACCGGCGATGCGTGGGAAGCACAAGCGCGTCGCTGGCTGGAAGGCAAAGGACTGCGGTTTATCGCCGCTAACGTGAACGAGCGTGGCGGCGAGATCGATCTGATAATGCGTGAAGGCCGGACCACCATTTTTGTCGAGGTACGCTATCGCCGCTCTGCGCTTTATGGCGGCGCGGCAGCCAGTGTGACCCGCAGCAAACAACACAAATTATTACAGACTGCCCGCTTGTGGCTCGCGCGTCATAATGGGAGTTTTGATACTGTGGATTGCCGGTTCGATGTGGTAGCCTTCACCGGGAATGAGGTTGAGTGGATTAAGGATGCCTTTAATGACCACTCATAA", - "dna_sequence_length": 396, - "functions": [ - "UPF0102 family protein" - ], - "id": "CDS_3094", - "location": [ - [ - "NC_000913", - 3295394, - "+", - 396 - ] - ], - "md5": "6d07582173b77b57a1cd8b5fbbb585f1", - "parent_gene": "", - "protein_md5": "e61d6c47f0c413069058deb6dcf035d8", - "protein_translation": "MATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVNERGGEIDLIMREGRTTIFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEWIKDAFNDHS", - "protein_translation_length": 131, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3118" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P66817" - ], - [ - "gene_synonym", - "GI:16131041" - ], - [ - "gene_synonym", - "b3149" - ], - [ - "gene_synonym", - "ECK3137" - ], - [ - "gene_synonym", - "GeneID:947661" - ], - [ - "gene_synonym", - "NP_417618.1" - ], - [ - "gene_synonym", - "diaA" - ], - [ - "gene_synonym", - "ASAP:ABE-0010348" - ], - [ - "gene_synonym", - "yraO" - ], - [ - "gene_synonym", - "EcoGene:EG12780" - ] - ], - "dna_sequence": "GTGCAAGAAAGAATTAAAGCTTGCTTCACTGAAAGCATTCAAACTCAAATTGCGGCGGCAGAGGCGCTTCCGGATGCCATCTCCCGTGCAGCCATGACGCTGGTTCAGTCTCTGCTCAATGGCAACAAAATCCTCTGTTGTGGTAATGGAACTTCCGCTGCCAATGCACAGCATTTTGCTGCCAGCATGATCAACCGTTTCGAAACGGAGCGGCCCAGCTTACCTGCCATTGCACTAAATACTGATAATGTTGTCTTAACGGCGATTGCCAACGATCGCTTACATGATGAAGTGTATGCAAAACAGGTGCGGGCGCTGGGTCATGCGGGAGATGTATTGTTAGCCATTTCCACCCGTGGCAACAGCCGCGATATTGTTAAAGCAGTTGAAGCCGCCGTTACGCGTGATATGACCATTGTGGCATTGACCGGCTATGACGGCGGCGAACTTGCAGGTTTGTTAGGGCCACAGGATGTGGAGATCCGCATTCCTTCGCATCGTAGTGCTCGCATTCAGGAAATGCATATGCTGACGGTAAATTGCCTGTGCGATCTGATCGATAACACGCTTTTCCCTCACCAGGATGATTAA", - "dna_sequence_length": 591, - "functions": [ - "DnaA initiator-associating factor for replication initiation" - ], - "id": "CDS_3095", - "location": [ - [ - "NC_000913", - 3295809, - "+", - 591 - ] - ], - "md5": "e377f296f4e07015b7a6f0d550925c4e", - "parent_gene": "", - "protein_md5": "13a4d98c5cb15799c01ed76a12ca229e", - "protein_translation": "MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDD", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3119" - ], - [ - "gene_synonym", - "EcoGene:EG12781" - ], - [ - "gene_synonym", - "GI:16131042" - ], - [ - "gene_synonym", - "b3150" - ], - [ - "gene_synonym", - "ECK3138" - ], - [ - "gene_synonym", - "yraP" - ], - [ - "gene_synonym", - "GeneID:947659" - ], - [ - "gene_synonym", - "ASAP:ABE-0010350" - ], - [ - "gene_synonym", - "NP_417619.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64596" - ], - [ - "gene_synonym", - "ecfH" - ] - ], - "dna_sequence": "ATGAAGGCATTATCGCCAATCGCAGTCCTTATTTCCGCGCTGCTGTTGCAAGGTTGTGTTGCCGCTGCCGTAGTGGGTACCGCTGCTGTGGGTACCAAAGCCGCAACTGACCCACGCAGTGTCGGCACCCAGGTGGACGATGGTACCCTGGAAGTGCGCGTGAACAGCGCATTGTCGAAAGACGAACAGATTAAGAAAGAAGCGCGCATTAATGTAACGGCCTATCAGGGCAAAGTGCTGCTGGTTGGGCAGTCACCAAATGCTGAACTTTCGGCTCGCGCCAAACAGATTGCTATGGGCGTAGACGGTGCCAACGAAGTGTATAACGAGATTCGTCAGGGCCAGCCGATTGGTCTGGGCGAAGCATCTAACGATACGTGGATCACCACCAAAGTGCGTTCGCAGCTCTTAACCAGCGACCTGGTGAAATCGTCCAACGTGAAAGTGACCACCGAAAACGGTGAAGTGTTCCTGATGGGGCTGGTGACTGAACGTGAAGCGAAAGCGGCGGCAGATATTGCCAGCCGGGTGAGCGGCGTGAAGCGGGTAACTACGGCGTTTACGTTTATTAAATAG", - "dna_sequence_length": 576, - "functions": [ - "outer membrane lipoprotein" - ], - "id": "CDS_3096", - "location": [ - [ - "NC_000913", - 3296409, - "+", - 576 - ] - ], - "md5": "276a8d5d39d2e43f7f5947a9fa35ba13", - "parent_gene": "", - "protein_md5": "3182b332d3bf53110c047a967d45302d", - "protein_translation": "MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQVDDGTLEVRVNSALSKDEQIKKEARINVTAYQGKVLLVGQSPNAELSARAKQIAMGVDGANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMGLVTEREAKAAADIASRVSGVKRVTTAFTFIK", - "protein_translation_length": 191, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131043" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45468" - ], - [ - "gene_synonym", - "GeneID:947668" - ], - [ - "gene_synonym", - "EcoGene:EG12782" - ], - [ - "gene_synonym", - "ECK3139" - ], - [ - "gene_synonym", - "b3151" - ], - [ - "gene_synonym", - "yraQ" - ], - [ - "gene_synonym", - "JW3120" - ], - [ - "gene_synonym", - "NP_417620.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010353" - ] - ], - "dna_sequence": "ATGACTGGTCAGTCTTCATCTCAGGCGGCAACGCCCATTCAGTGGTGGAAACCCGCGCTTTTCTTTCTCGTTGTCATTGCCGGTCTCTGGTATGTGAAATGGGAACCTTACTACGGCAAAGCGTTTACTGCTGCCGAAACCCACAGTATCGGTAAATCTATCCTTGCGCAGGCGGATGCTAACCCATGGCAGGCGGCGTTGGATTACGCGATGATCTATTTCCTCGCGGTATGGAAAGCGGCGGTGCTGGGGGTGATCCTCGGTTCGTTGATTCAGGTGCTGATCCCGCGTGACTGGTTGTTGCGTACGCTTGGGCAATCGCGCTTTCGCGGCACGCTGCTGGGAACGCTGTTTTCGTTGCCGGGCATGATGTGTACCTGCTGTGCGGCTCCGGTCGCGGCGGGAATGCGTCGCCAACAGGTGTCGATGGGCGGTGCGCTGGCATTCTGGATGGGCAATCCGGTGTTAAACCCGGCGACGCTGGTGTTTATGGGCTTTGTCCTCGGCTGGGGTTTTGCGGCGATTCGTCTGGTGGCCGGGCTGGTGATGGTGTTGCTGATTGCGACGCTGGTGCAAAAATGGGTGCGTGAAACACCGCAAACGCAGGCACCGGTCGAAATTGACATACCGGAAGCACAGGGCGGGTTTTTTAGCCGCTGGGGCAGGGCGCTATGGACGCTTTTCTGGAGTACGATCCCGGTTTACATCCTTGCAGTACTGGTGTTGGGTGCCGCTCGCGTCTGGTTATTCCCCCATGCCGATGGTGCTGTCGATAACAGCCTGATGTGGGTGGTGGCGATGGCGGTAGCAGGATGCTTGTTTGTCATTCCCACGGCAGCAGAAATTCCGATTGTACAAACGATGATGCTGGCAGGTATGGGAACCGCTCCGGCGCTGGCATTGTTGATGACGCTCCCGGCAGTGAGTTTGCCGTCACTGATTATGCTGCGCAAAGCGTTCCCGGCGAAAGCCTTATGGCTGACAGGGGCGATGGTGGCAGTGTCTGGTGTGATTGTCGGCGGGCTGGCGCTGTTGTTCTGA", 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- ], - [ - "gene_synonym", - "GI:90111547" - ], - [ - "gene_synonym", - "ASAP:ABE-0010356" - ], - [ - "gene_synonym", - "GeneID:947667" - ], - [ - "gene_synonym", - "NP_417621.2" - ] - ], - "dna_sequence": "ATGAGTCAGGTACTGATTACAGGCGCAACGGGGCTGGTGGGCGGTCACCTGCTGCGGATGTTGATTAACGAACCGAAAGTTAACGCCATTGCTGCGCCGACGCGACGTCCGTTGGGCGATATGCCCGGGGTGTTTAATCCCCATGATCCGCAACTGAGTGACGCGTTGGCGCAGGTCACCGATCCCATCGACATTGTGTTTTGTTGTCTCGGCACCACGCGGCGAGAAGCGGGGAGCAAAGAGGCGTTTATTCATGCCGATTACACGCTGGTAGTGGATACCGCATTAACCGGGCGGCGACTGGGCGCGCAGCATATGTTGGTAGTCAGTGCGATGGGTGCCAATGCCCACTCGCCGTTTTTCTATAACCGCGTCAAAGGGGAGATGGAAGAAGCATTAATCGCCCAGAACTGGCCGAAATTGACCATTGCTCGCCCGTCGATGTTACTGGGCGATCGTAGCAAACAGCGGATGAACGAAACGCTTTTTGCGCCGCTGTTCCGTTTGTTACCAGGTAACTGGAAATCCATTGATGCGAGAGACGTGGCGCGGGTCATGCTGGCAGAGTCGATGCGGCCTGAGCATGAAGGCGTGACGATTTTAAGCTCTTCAGAATTACGCAAAAGAGCTGAATAA", - "dna_sequence_length": 636, - "functions": [ - "putative nucleoside-diphosphate-sugar epimerase" - ], - "id": "CDS_3098", - "location": [ - [ - "NC_000913", - 3298846, - "-", - 636 - ] - ], - "md5": "506f45336a023863370725a059b32a93", - "parent_gene": "", - "protein_md5": "5f6ff897400e90b230e3132fadc227a3", - "protein_translation": "MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGVFNPHDPQLSDALAQVTDPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLGAQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNETLFAPLFRLLPGNWKSIDARDVARVMLAESMRPEHEGVTILSSSELRKRAE", - "protein_translation_length": 211, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12784" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45470" - ], - [ - "gene_synonym", - "NP_417622.2" - ], - [ - "gene_synonym", - "ECK3141" - ], - [ - "gene_synonym", - "yhbO" - ], - [ - "gene_synonym", - "b3153" - ], - [ - "gene_synonym", - "GeneID:947666" - ], - [ - "gene_synonym", - "JW5529" - ], - [ - "gene_synonym", - "ASAP:ABE-0010361" - ], - [ - "gene_synonym", - "GI:90111548" - ] - ], - "dna_sequence": "ATGAGTAAGAAAATTGCCGTTTTAATCACTGATGAATTTGAGGATTCAGAATTTACTTCACCCGCAGACGAGTTCCGTAAAGCCGGACACGAAGTGATTACCATTGAAAAACAAGCGGGTAAAACGGTGAAAGGCAAAAAAGGAGAAGCCAGCGTGACCATCGATAAATCCATCGATGAAGTGACGCCTGCGGAGTTTGATGCCCTGCTGCTACCGGGCGGCCATTCACCGGATTATCTGCGTGGGGACAACCGTTTTGTCACCTTTACCCGTGATTTTGTGAATAGTGGCAAACCGGTGTTTGCCATCTGTCACGGCCCGCAGTTGCTGATCAGCGCCGATGTGATTCGGGGGCGCAAACTGACCGCAGTTAAACCGATCATTATTGATGTTAAAAATGCGGGCGCGGAATTTTACGATCAGGAAGTCGTGGTTGATAAAGATCAGCTGGTTACCAGCCGGACACCGGACGATCTGCCAGCGTTTAACCGCGAGGCGTTACGCCTGCTCGGTGCCTGA", - "dna_sequence_length": 519, - "functions": [ - "stress-resistance protein" - ], - "id": "CDS_3099", - "location": [ - [ - "NC_000913", - 3298974, - "+", - 519 - ] - ], - "md5": "952ba3a07bdf283346261e9d20e672fa", - "parent_gene": "", - "protein_md5": "9aa82d4890c709acd158573fb5dcfc10", - "protein_translation": "MSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLPAFNREALRLLGA", - "protein_translation_length": 172, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12785" - ], - [ - "gene_synonym", - "GI:16131046" - ], - [ - "gene_synonym", - "GeneID:947665" - ], - [ - "gene_synonym", - "ECK3142" - ], - [ - "gene_synonym", - "b3154" - ], - [ - "gene_synonym", - "NP_417623.1" - ], - [ - "gene_synonym", - "yhbP" - ], - [ - "gene_synonym", - "ASAP:ABE-0010363" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67762" - ], - [ - "gene_synonym", - "JW3123" - ] - ], - "dna_sequence": "ATGGAAACACTCATCGCCATCAGCCGTTGGCTGGCAAAACAACATGTTGTCACTTGGTGTGTGCAGCAGGAAGGGGAACTCTGGTGCGCTAATGCCTTTTATCTTTTTGATGCGCAGAAAGTCGCCTTCTACATTTTGACGGAAGAAAAAACGCGCCACGCGCAGATGAGTGGGCCGCAGGCTGCGGTTGCCGGAACGGTAAACGGTCAGCCGAAAACGGTAGCGTTAATTCGCGGTGTGCAGTTTAAAGGTGAGATCCGCAGGCTGGAAGGTGAGGAAAGCGACCTCGCGCGCAAGGCGTACAATCGTCGCTTTCCGGTTGCCAGAATGCTGTCGGCCCCGGTGTGGGAAATCCGGCTCGATGAAATCAAATTCACCGACAACACGCTGGGCTTTGGTAAAAAAATGATTTGGCTACGCGACTCAGGCACCGAGCAGGCGTAA", - "dna_sequence_length": 444, - "functions": [ - "UPF0306 family protein" - ], - "id": "CDS_3100", - "location": [ - [ - "NC_000913", - 3299915, - "-", - 444 - ] - ], - "md5": "6e96d2afadf4385618a71979185a0ea5", - "parent_gene": "", - "protein_md5": "0275d594d49c1f6c3d8cdb5b1e06f89f", - "protein_translation": "METLIAISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFYILTEEKTRHAQMSGPQAAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYNRRFPVARMLSAPVWEIRLDEIKFTDNTLGFGKKMIWLRDSGTEQA", - "protein_translation_length": 147, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12786" - ], - [ - "gene_synonym", - "GI:16131047" - ], - [ - "gene_synonym", - "JW3124" - ], - [ - "gene_synonym", - "ECK3143" - ], - [ - "gene_synonym", - "b3155" - ], - [ - "gene_synonym", - "GeneID:947671" - ], - [ - "gene_synonym", - "yhbQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0010370" - ], - [ - "gene_synonym", - "NP_417624.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45472" - ] - ], - "dna_sequence": "ATGACACCCTGGTTTCTTTACTTGATCCGTACCGCCGACAATAAGCTTTATACCGGGATCACCACGGATGTCGAACGCCGCTATCAGCAGCACCAAAGCGGCAAAGGGGCGAAAGCACTGCGCGGGAAAGGAGAACTAACGCTGGTGTTTTCCGCGCCAGTGGGCGATCGTTCGCTGGCGTTACGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGA", - "dna_sequence_length": 303, - "functions": [ - "GIY-YIG nuclease superfamily protein" - ], - "id": "CDS_3101", - "location": [ - [ - "NC_000913", - 3299966, - "+", - 303 - ] - ], - "md5": "34cf58ff781e65605a897064b8f90d8f", - "parent_gene": "", - "protein_md5": "7b94eebf779c750e05e2ca5fdba4a318", - "protein_translation": "MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKGELTLVFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD", - "protein_translation_length": 100, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3125" - ], - [ - "gene_synonym", - "GI:16131048" - ], - [ - "gene_synonym", - "ECK3144" - ], - [ - "gene_synonym", - "EcoGene:EG12788" - ], - [ - "gene_synonym", - "b3156" - ], - [ - "gene_synonym", - "NP_417625.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010373" - ], - [ - "gene_synonym", - "GeneID:947670" - ], - [ - "gene_synonym", - "yhbS" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63417" - ] - ], - "dna_sequence": "ATGCTAATTCGAGTAGAAATTCCCATTGATGCGCCGGGTATTGATGCCCTGCTGCGTCGCTCATTCGAAAGTGATGCGGAAGCGAAGCTGGTTCACGATCTGCGTGAAGATGGCTTTCTGACGCTGGGGCTGGTGGCGACAGATGACGAAGGTCAGGTCATTGGCTATGTGGCATTTAGTCCGGTTGATGTGCAGGGCGAAGACCTGCAATGGGTCGGCATGGCACCGTTGGCGGTTGATGAAAAATACCGTGGACAGGGGCTGGCACGCCAACTGGTCTATGAAGGACTCGATTCGCTTAATGAGTTCGGCTATGCCGCAGTGGTGACGCTGGGCGATCCGGCGCTGTACAGTCGTTTCGGCTTTGAACTGGCGGCGCATCACGATCTGCGTTGCCGCTGGCCGGGCACTGAAAGCGCCTTCCAGGTACATCGTTTAGCGGATGACGCGCTGAATGGCGTTACCGGCCTGGTTGAGTATCACGAGCATTTCAATCGCTTTTAA", - "dna_sequence_length": 504, - "functions": [ - "GNAT family putative N-acetyltransferase" - ], - "id": "CDS_3102", - "location": [ - [ - "NC_000913", - 3300758, - "-", - 504 - ] - ], - "md5": "0f887ab2095e788328c1e60db8ce0ea4", - "parent_gene": "", - "protein_md5": "d1085cd555e31f30dc7869b9c267bdd5", - "protein_translation": "MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEYHEHFNRF", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947669" - ], - [ - "gene_synonym", - "GI:16131049" - ], - [ - "gene_synonym", - "JW3126" - ], - [ - "gene_synonym", - "EcoGene:EG12789" - ], - [ - "gene_synonym", - "ECK3145" - ], - [ - "gene_synonym", - "NP_417626.1" - ], - [ - "gene_synonym", - "yhbT" - ], - [ - "gene_synonym", - "ASAP:ABE-0010375" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64599" - ], - [ - "gene_synonym", - "b3157" - ] - ], - "dna_sequence": "GTGTTGGATAAACTGCGTTCCCGTATTGTGCATTTGGGGCCATCTCTGTTGAGTGTACCGGTAAAACTGACGCCATTTGCGCTAAAACGCCAGGTTCTTGAGCAGGTCTTAAGCTGGCAATTCCGCCAGGCGCTGGATGATGGCGAGCTGGAGTTTCTTGAAGGCCGCTGGTTAAGTATTCATGTGCGTGATATTGACCTGCAATGGTTTACCTCGGTGGTGAATGGCAAACTGGTCGTTAGCCAGAACGCGCAAGCTGATGTGAGTTTTAGTGCCGACGCCAGCGATCTGCTGATGATTGCGGCGCGTAAACAAGATCCGGATACGCTCTTCTTCCAGCGTCGGCTGGTGATTGAAGGCGATACGGAGCTGGGGCTGTATGTGAAAAACCTGATGGACGCCATTGAACTGGAGCAAATGCCGAAAGCCTTACGCATGATGCTGCTGCAACTGGCGGATTTTGTTGAGGCGGGAATGAAAACCGCGCCTGAAACCAAACAGACATCGGTAGGTGAACCATGCTAA", - "dna_sequence_length": 525, - "functions": [ - "SCP-2 sterol transfer family protein" - ], - "id": "CDS_3103", - "location": [ - [ - "NC_000913", - 3301276, - "-", - 525 - ] - ], - "md5": "3ac522c6bd5e9542ce6d5cb0eaa7a154", - "parent_gene": "", - "protein_md5": "bdc871d35f047f4d5a492616cdd0619b", - "protein_translation": "MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQALDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRMMLLQLADFVEAGMKTAPETKQTSVGEPC", - "protein_translation_length": 174, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3158" - ], - [ - "gene_synonym", - "GI:16131050" - ], - [ - "gene_synonym", - "NP_417627.1" - ], - [ - "gene_synonym", - "JW3127" - ], - [ - "gene_synonym", - "EcoGene:EG12790" - ], - [ - "gene_synonym", - "ECK3146" - ], - [ - "gene_synonym", - "yhbU" - ], - [ - "gene_synonym", - "GeneID:949115" - ], - [ - "gene_synonym", - "ASAP:ABE-0010380" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45527" - ] - ], - "dna_sequence": "ATGGAGCTGCTCTGCCCTGCCGGAAATCTCCCGGCGCTTAAGGCGGCCATCGAAAACGGCGCAGATGCTGTTTATATCGGGCTAAAAGATGATACCAATGCCCGTCACTTCGCCGGCCTTAACTTTACCGAGAAAAAATTGCAGGAAGCGGTGAGTTTTGTCCATCAACATCGCCGCAAACTTCACATCGCGATTAACACTTTTGCGCATCCGGACGGTTACGCCCGTTGGCAGCGCGCCGTGGATATGGCGGCGCAGCTGGGTGCCGACGCGCTGATCCTCGCCGACCTCGCCATGCTGGAGTACGCCGCCGAGCGTTATCCGCATATTGAGCGCCACGTATCGGTGCAGGCTTCGGCGACCAATGAAGAGGCGATTAACTTTTATCATCGCCATTTTGACGTTGCTCGCGTGGTGCTGCCGCGCGTGTTGTCGATTCATCAGGTGAAACAACTGGCACGGGTCACACCTGTACCACTGGAAGTCTTTGCTTTCGGCAGCCTGTGCATTATGTCGGAAGGTCGTTGCTATCTGTCGTCGTATCTGACGGGTGAGTCGCCCAACACCATAGGCGCGTGTTCTCCGGCCCGTTTCGTGCGCTGGCAACAAACGCCGCAGGGGCTGGAATCCCGCCTGAACGAAGTGCTGATCGACCGTTATCAGGACGGCGAAAACGCAGGTTATCCGACGCTATGTAAAGGGCGTTATCTGGTGGACGGCGAGCGCTATCACGCGCTGGAAGAACCAACCAGTCTCAATACCCTGGAACTGCTGCCGGAGTTAATGGCGGCGAATATTGCTTCGGTGAAAATTGAAGGCCGCCAGCGTAGCCCGGCGTATGTCAGCCAGGTGGCGAAAGTCTGGCGTCAGGCTATCGACCGTTGTAAGGCCGATCCGCAAAACTTTGTACCGCAAAGCGCGTGGATGGAGACGCTCGGGTCGATGTCCGAAGGCACGCAAACCACTCTTGGCGCATATCACCGTAAATGGCAGTGA", 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"gene_synonym", - "ASAP:ABE-0010382" - ], - [ - "gene_synonym", - "GeneID:949117" - ], - [ - "gene_synonym", - "GI:90111549" - ], - [ - "gene_synonym", - "JW5530" - ] - ], - "dna_sequence": "ATGAAATATTCCTTAGGGCCAGTGCTGTGGTACTGGCCAAAAGAGACGCTGGAAGAATTTTATCAGCAGGCCGCCACCAGCAGCGCCGACGTGATTTATCTTGGTGAAGCGGTATGCAGCAAGCGTCGGGCAACCAAAGTTGGCGACTGGCTGGAGATGGCAAAATCGCTCGCCGGGAGTGGTAAGCAGATTGTGCTCTCCACGCTGGCGCTGGTGCAGGCATCATCTGAACTGGGCGAACTGAAACGCTATGTTGAGAACGGTGAGTTTCTGATTGAAGCCAGCGATCTCGGCGTGGTGAATATGTGCGCTGAACGCAAACTGCCGTTCGTCGCCGGGCACGCGCTGAACTGCTACAACGCGGTGACACTGAAAATATTGCTCAAACAGGGCATGATGCGCTGGTGTATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAGTCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAACCTGCTGCATTAAGTATCCGAACGGGCGCAACGTGCTGTCGCAGGAAAACCAACAAGTGTTTGTACTCAATGGCATTCAGACCATGAGCGGCTACGTTTACAACCTCGGTAACGAGCTGGCATCCATGCAGGGCCTGGTTGATGTGGTCCGCCTGTCACCGCAGGGTACTGACACTTTCGCGATGCTCGACGCCTTCCGCGCTAATGAAAATGGCGCTGCACCACTGCCGTTGACGGCGAACAGCGACTGTAACGGCTACTGGCGGCGGCTGGCAGGACTGGAGCTGCAAGCCTAA", - "dna_sequence_length": 879, - "functions": [ - "U32 peptidase family protein" - ], - "id": "CDS_3105", - "location": [ - [ - "NC_000913", - 3302489, - "+", - 879 - ] - ], - "md5": "513fa61ae41ea66938b0bf083189e95a", - "parent_gene": "", - "protein_md5": "e5b7ec13fe4fb6f2d6a310f11b24c6ac", - "protein_translation": "MKYSLGPVLWYWPKETLEEFYQQAATSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNMCAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLNGIQTMSGYVYNLGNELASMQGLVDVVRLSPQGTDTFAMLDAFRANENGAAPLPLTANSDCNGYWRRLAGLELQA", - "protein_translation_length": 292, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3148" - ], - [ - "gene_synonym", - "b3160" - ], - [ - "gene_synonym", - "GI:16131052" - ], - [ - "gene_synonym", - "NP_417629.1" - ], - [ - "gene_synonym", - "GeneID:947677" - ], - [ - "gene_synonym", - "yhbW" - ], - [ - "gene_synonym", - "ASAP:ABE-0010385" - ], - [ - "gene_synonym", - "EcoGene:EG12792" - ], - [ - "gene_synonym", - "JW3129" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADV5" - ] - ], - "dna_sequence": "ATGACTGATAAAACCATTGCGTTTTCGCTACTCGATCTGGCCCCCATTCCCGAAGGTTCTTCAGCGCGAGAAGCATTCTCCCACTCTCTCGATCTCGCCCGTCTGGCTGAAAAGCGCGGCTATCATCGCTACTGGCTGGCAGAACACCACAATATGACTGGCATTGCCAGTGCTGCCACGTCGGTATTGATCGGCTATCTGGCGGCGAATACCACCACGCTGCATCTGGGGTCTGGCGGCGTGATGTTGCCTAACCACTCACCGTTGGTCATTGCAGAACAGTTCGGCACGCTTAATACACTCTATCCGGGGCGAATCGATTTGGGGCTGGGTCGTGCTCCGGGTAGTGACCAACGGACAATGATGGCGCTACGTCGTCATATGAGCGGCGATATTGATAATTTCCCCCGCGATGTGGCGGAGCTGGTGGACTGGTTTGACGCCCGCGATCCCAATCCGCATGTGCGCCCGGTACCAGGCTATGGCGAGAAAATCCCCGTGTGGTTGTTAGGCTCCAGCCTTTACAGCGCGCAACTGGCGGCGCAGCTTGGTCTGCCGTTTGCGTTTGCCTCACACTTCGCGCCGGATATGCTGTTCCAGGCGCTGCATCTTTATCGCAGCAACTTCAAACCGTCAGCACGGCTGGAAAAACCATACGCGATGGTGTGCATCAATATTATCGCCGCCGACAGCAACCGCGACGCTGAATTTCTGTTTACCTCAATGCAGCAAGCCTTTGTGAAGCTGCGCCGTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAG", - "dna_sequence_length": 1008, - "functions": [ - "putative luciferase-like monooxygenase" - ], - "id": "CDS_3106", - "location": [ - [ - "NC_000913", - 3303448, - "+", - 1008 - ] - ], - "md5": "0c623cd708e778ffa482e3f2df76a8e7", - "parent_gene": "", - "protein_md5": "6547a4edb113747cab8e6e6e19a4fd73", - "protein_translation": "MTDKTIAFSLLDLAPIPEGSSAREAFSHSLDLARLAEKRGYHRYWLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPGYGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKPYAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGVQQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAMDVKEELLG", - "protein_translation_length": 335, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3161" - ], - [ - "gene_synonym", - "ECK3149" - ], - [ - "gene_synonym", - "NP_417630.1" - ], - [ - "gene_synonym", - "GI:16131053" - ], - [ - "gene_synonym", - "mtr" - ], - [ - "gene_synonym", - "GeneID:947675" - ], - [ - "gene_synonym", - "JW3130" - ], - [ - "gene_synonym", - "ASAP:ABE-0010387" - ], - [ - "gene_synonym", - "EcoGene:EG10617" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAD2" - ] - ], - "dna_sequence": "ATGGCAACACTAACCACCACCCAAACGTCACCGTCGCTGCTTGGCGGCGTGGTGATTATCGGCGGCACCATTATTGGCGCAGGGATGTTTTCTCTGCCAGTGGTCATGTCCGGGGCGTGGTTTTTCTGGTCAATGGCGGCGCTGATCTTTACCTGGTTCTGTATGCTGCATTCCGGCTTGATGATTCTGGAAGCTAACCTGAATTACAGAATCGGTTCGAGTTTTGACACCATCACCAAAGATTTGCTGGGCAAAGGCTGGAACGTGGTCAACGGCATTTCCATTGCCTTTGTGCTCTATATCCTGACCTATGCCTATATTTCTGCCAGTGGTTCGATTCTGCATCACACCTTCGCAGAGATGTCACTAAACGTCCCGGCACGGGCGGCGGGTTTTGGTTTTGCATTGCTGGTAGCGTTTGTGGTGTGGTTGAGCACTAAAGCCGTCAGTCGCATGACAGCGATTGTGCTGGGGGCGAAAGTCATTACCTTCTTCCTCACCTTTGGTAGCCTGCTGGGGCATGTGCAGCCTGCGACATTGTTCAACGTCGCCGAAAGCAATGCGTCTTATGCACCGTATCTGTTGATGACCCTGCCGTTCTGTCTGGCATCGTTTGGTTATCACGGTAACGTGCCAAGCCTGATGAAGTATTACGGCAAAGATCCGAAAACCATCGTGAAATGTCTGGTGTACGGTACGCTGATGGCGCTGGCGCTGTATACCATCTGGTTGCTGGCGACGATGGGTAACATCCCGCGTCCGGAGTTTATCGGTATTGCAGAGAAGGGCGGTAATATTGATGTGCTGGTACAGGCGTTAAGCGGCGTACTGAACAGCCGTAGTCTGGATCTGCTGCTGGTCGTGTTCTCAAACTTTGCGGTAGCGAGTTCGTTCCTCGGCGTAACGCTGGGTTTGTTTGACTATCTGGCAGATCTGTTTGGTTTCGACGACTCGGCTGTGGGCCGCTTGAAAACGGCATTGCTGACCTTTGCCCCGCCAGTTGTGGGGGGGCTGTTGTTCCCGAACGGATTCCTGTACGCCATTGGTTATGCTGGTTTAGCGGCTACCATCTGGGCGGCAATTGTTCCGGCGCTGTTAGCCCGTGCATCGCGTAAACGCTTTGGCAGCCCGAAATTCCGCGTCTGGGGTGGCAAGCCGATGATTGCGCTGATTCTGGTGTTTGGCGTCGGCAACGCACTGGTGCATATTTTATCGAGCTTTAATTTACTGCCGGTGTATCAGTAA", - "dna_sequence_length": 1245, - "functions": [ - "tryptophan transporter of high affinity" - ], - "id": "CDS_3107", - "location": [ - [ - "NC_000913", - 3305817, - "-", - 1245 - ] - ], - "md5": "d4163134d977166721728f20543bf6a6", - "parent_gene": "", - "protein_md5": "ed254db07239fc87bd36c45a42b89b8d", - "protein_translation": "MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALIFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAAGFGFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPATLFNVAESNASYAPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPKTIVKCLVYGTLMALALYTIWLLATMGNIPRPEFIGIAEKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAVGRLKTALLTFAPPVVGGLLFPNGFLYAIGYAGLAATIWAAIVPALLARASRKRFGSPKFRVWGGKPMIALILVFGVGNALVHILSSFNLLPVYQ", - "protein_translation_length": 414, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rhlD" - ], - [ - "gene_synonym", - "mssB" - ], - [ - "gene_synonym", - "EcoGene:EG10215" - ], - [ - "gene_synonym", - "GeneID:947674" - ], - [ - "gene_synonym", - "ECK3150" - ], - [ - "gene_synonym", - "NP_417631.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9P6" - ], - [ - "gene_synonym", - "deaD" - ], - [ - "gene_synonym", - "b3162" - ], - [ - "gene_synonym", - "GI:90111550" - ], - [ - "gene_synonym", - "ASAP:ABE-0010392" - ], - [ - "gene_synonym", - "csdA" - ], - [ - "gene_synonym", - "JW5531" - ] - ], - "dna_sequence": "ATGGCTGAATTCGAAACCACTTTTGCAGATCTGGGCCTGAAGGCTCCTATCCTTGAAGCCCTTAACGATCTGGGTTACGAAAAACCATCTCCAATTCAGGCAGAGTGTATTCCACATCTGCTGAATGGCCGCGACGTTCTGGGTATGGCCCAGACGGGGAGCGGAAAAACTGCAGCATTCTCTTTACCTCTGTTGCAGAATCTTGATCCTGAGCTGAAAGCACCACAGATTCTGGTGCTGGCACCGACCCGCGAACTGGCGGTACAGGTTGCTGAAGCAATGACGGATTTCTCTAAACACATGCGCGGCGTAAATGTGGTTGCTCTGTACGGCGGCCAGCGTTATGACGTGCAATTACGCGCCCTGCGTCAGGGGCCGCAGATCGTTGTCGGTACTCCGGGCCGTCTGCTGGACCACCTGAAACGTGGCACTCTGGACCTCTCTAAACTGAGCGGTCTGGTTCTGGATGAAGCTGACGAAATGCTGCGCATGGGCTTCATCGAAGACGTTGAAACCATTATGGCGCAGATCCCGGAAGGTCATCAGACCGCTCTGTTCTCTGCAACCATGCCGGAAGCGATTCGTCGCATTACCCGCCGCTTTATGAAAGAGCCGCAGGAAGTGCGCATTCAGTCCAGCGTGACTACCCGTCCTGACATCAGCCAGAGCTACTGGACTGTCTGGGGTATGCGCAAAAACGAAGCACTGGTACGTTTCCTGGAAGCGGAAGATTTTGATGCGGCGATTATCTTCGTTCGTACCAAAAACGCGACTCTGGAAGTGGCTGAAGCTCTTGAGCGTAACGGCTACAACAGCGCCGCGCTGAACGGTGACATGAACCAGGCGCTGCGTGAACAGACACTGGAACGCCTGAAAGATGGTCGTCTGGACATCCTGATTGCGACCGACGTTGCAGCCCGTGGCCTGGACGTTGAGCGTATCAGCCTGGTAGTTAACTACGATATCCCGATGGATTCTGAGTCTTACGTTCACCGTATCGGTCGTACCGGTCGTGCGGGTCGTGCTGGCCGCGCGCTGCTGTTCGTTGAGAACCGCGAGCGTCGTCTGCTGCGCAACATTGAACGTACTATGAAGCTGACTATTCCGGAAGTAGAACTGCCGAACGCAGAACTGCTAGGCAAACGCCGTCTGGAAAAATTCGCCGCTAAAGTACAGCAGCAGCTGGAAAGCAGCGATCTGGATCAATACCGCGCACTGCTGAGCAAAATTCAGCCGACTGCTGAAGGTGAAGAGCTGGATCTCGAAACTCTGGCTGCGGCACTGCTGAAAATGGCACAGGGTGAACGTACTCTGATCGTACCGCCAGATGCGCCGATGCGTCCGAAACGTGAATTCCGTGACCGTGATGACCGTGGTCCGCGCGATCGTAACGACCGTGGCCCGCGTGGTGACCGTGAAGATCGTCCGCGTCGTGAACGTCGTGATGTTGGCGATATGCAGCTGTACCGCATTGAAGTGGGCCGCGATGATGGTGTTGAAGTTCGTCATATCGTTGGTGCGATTGCTAACGAAGGCGACATCAGCAGCCGTTACATTGGTAACATCAAGCTGTTTGCTTCTCACTCCACCATCGAACTGCCGAAAGGTATGCCGGGTGAAGTGCTGCAACACTTTACGCGCACTCGCATTCTCAACAAGCCGATGAACATGCAGTTACTGGGCGATGCACAGCCGCATACTGGCGGTGAGCGTCGTGGCGGTGGTCGTGGTTTCGGTGGCGAACGTCGTGAAGGCGGTCGTAACTTCAGCGGTGAACGCCGTGAAGGTGGCCGTGGTGATGGTCGTCGTTTTAGCGGCGAACGTCGTGAAGGCCGCGCTCCGCGTCGTGATGATTCTACCGGTCGTCGTCGTTTCGGTGGTGATGCGTAA", - "dna_sequence_length": 1890, - "functions": [ - "ATP-dependent RNA helicase" - ], - "id": "CDS_3108", - "location": [ - [ - "NC_000913", - 3307860, - "-", - 1890 - ] - ], - "md5": "8ce19456c4ff8d393d6c1f334a5696b9", - "parent_gene": "", - "protein_md5": "63ab99fd94e9336d61e988e8a8953030", - "protein_translation": "MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRGFGGERREGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRRRFGGDA", - "protein_translation_length": 629, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14490" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P618" - ], - [ - "gene_synonym", - "GI:226524750" - ], - [ - "gene_synonym", - "YP_002791258.1" - ], - [ - "gene_synonym", - "GeneID:7751619" - ], - [ - "gene_synonym", - "yrbN" - ], - [ - "gene_synonym", - "ECK4500" - ], - [ - "gene_synonym", - "b4685" - ] - ], - "dna_sequence": "ATGAAAATTGCTGATCAATTTCATGATGAGTTATGTAGACTGGCCGCCATTAATTTTGAGGCACACGTACTACATGGCTGA", - "dna_sequence_length": 81, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_3109", - "location": [ - [ - "NC_000913", - 3307933, - "-", - 81 - ] - ], - "md5": "9070402bb42e54e46262b5c879c712ac", - "parent_gene": "", - "protein_md5": "c8ec2c77c6bf99c1b43150229a9fe1ad", - "protein_translation": "MKIADQFHDELCRLAAINFEAHVLHG", - "protein_translation_length": 26, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3163" - ], - [ - "gene_synonym", - "GI:16131055" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFB1" - ], - [ - "gene_synonym", - "yhbM" - ], - [ - "gene_synonym", - "ECK3151" - ], - [ - "gene_synonym", - "nlpI" - ], - [ - "gene_synonym", - "JW3132" - ], - [ - "gene_synonym", - "GeneID:947673" - ], - [ - "gene_synonym", - "NP_417632.1" - ], - [ - "gene_synonym", - "EcoGene:EG12371" - ], - [ - "gene_synonym", - "ASAP:ABE-0010395" - ] - ], - "dna_sequence": "ATGAAGCCTTTTTTGCGCTGGTGTTTCGTTGCGACAGCACTTACGCTTGCAGGATGCAGTAATACTTCCTGGCGTAAAAGTGAAGTCCTCGCGGTACCATTGCAACCGACTTTACAGCAGGAAGTGATTCTGGCACGTATGGAACAAATCCTTGCCAGTCGGGCTTTAACCGATGACGAACGCGCACAGCTTTTATATGAGCGCGGAGTGTTGTATGATAGTCTCGGTCTGAGGGCATTAGCGCGTAACGATTTTTCGCAAGCGCTGGCAATCCGACCGGATATGCCTGAAGTATTCAATTACTTAGGCATATATTTAACGCAGGCAGGCAATTTTGATGCTGCCTATGAAGCGTTTGATTCTGTACTTGAGCTTGATCCAACTTACAACTACGCGCACTTGAATCGCGGGATCGCATTATATTACGGCGGTCGTGACAAGTTAGCGCAAGATGATCTGCTGGCGTTTTATCAAGACGATCCCAATGATCCTTTCCGTAGTCTGTGGCTTTATCTCGCCGAGCAGAAGCTCGATGAGAAGCAGGCTAAAGAAGTGTTGAAACAGCACTTCGAAAAATCGGATAAGGAACAGTGGGGATGGAACATTGTCGAGTTCTACCTGGGCAACATTAGCGAACAAACGTTAATGGAAAGGCTCAAGGCGGACGCAACGGATAACACCTCGCTCGCTGAGCATCTCAGTGAAACCAACTTCTATTTAGGTAAGTACTACCTAAGTCTGGGGGATTTGGACAGCGCCACGGCACTGTTCAAACTGGCGGTTGCCAACAACGTTCATAACTTTGTTGAGCACCGATACGCATTGTTGGAATTATCGCTCCTGGGCCAGGACCAAGATGACCTGGCAGAATCGGACCAGCAATAG", - "dna_sequence_length": 885, - "functions": [ - "lipoprotein involved in osmotic sensitivity and filamentation" - ], - "id": "CDS_3110", - "location": [ - [ - "NC_000913", - 3308924, - "-", - 885 - ] - ], - "md5": "dcec89d966e6b4ff7ff0050a4ebe7146", - "parent_gene": "", - "protein_md5": "2ce92cf2f06fc5a6d101faab7303c360", - "protein_translation": "MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQQ", - "protein_translation_length": 294, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3164" - ], - [ - "gene_synonym", - "EcoGene:EG10743" - ], - [ - "gene_synonym", - "pnp" - ], - [ - "gene_synonym", - "GeneID:947672" - ], - [ - "gene_synonym", - "bfl" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05055" - ], - [ - "gene_synonym", - "ASAP:ABE-0010397" - ], - [ - "gene_synonym", - "ECK3152" - ], - [ - "gene_synonym", - "NP_417633.4" - ], - [ - "gene_synonym", - "GI:145698316" - ], - [ - "gene_synonym", - "JW5851" - ] - ], - "dna_sequence": "TTGCTTAATCCGATCGTTCGTAAATTCCAGTACGGCCAACACACCGTGACTCTGGAAACCGGCATGATGGCTCGTCAGGCTACTGCCGCTGTTATGGTTAGCATGGATGACACCGCGGTATTCGTTACCGTTGTTGGCCAGAAAAAAGCCAAACCAGGTCAGGACTTCTTCCCACTGACCGTTAACTATCAGGAGCGTACCTACGCTGCTGGTCGTATCCCGGGTAGCTTCTTCCGTCGTGAAGGCCGCCCAAGCGAAGGCGAAACCCTGATCGCGCGTCTGATTGACCGCCCGATTCGCCCGCTGTTCCCGGAAGGCTTCGTCAACGAAGTTCAGGTTATCGCCACCGTGGTTTCTGTTAACCCGCAAGTTAACCCGGATATCGTCGCGATGATTGGTGCTTCCGCAGCGCTGTCTCTGTCTGGTATTCCGTTCAATGGCCCGATTGGTGCTGCCCGCGTAGGTTACATCAATGACCAGTACGTACTGAACCCGACTCAGGACGAGCTGAAAGAGAGCAAACTGGATCTGGTTGTTGCCGGTACTGAAGCCGCTGTACTGATGGTTGAATCTGAAGCTCAACTGCTGAGCGAAGACCAGATGCTGGGCGCAGTAGTGTTCGGTCATGAACAACAGCAGGTTGTTATTCAGAACATCAATGAACTGGTGAAAGAAGCCGGTAAACCGCGTTGGGACTGGCAGCCGGAGCCGGTAAACGAAGCGCTAAACGCGCGCGTTGCTGCACTGGCTGAAGCTCGCCTGAGCGATGCTTACCGCATCACCGACAAACAAGAGCGTTATGCGCAGGTTGATGTCATCAAATCTGAAACCATCGCGACGCTGCTTGCTGAAGACGAAACCCTGGACGAAAACGAACTGGGTGAAATTCTGCACGCGATCGAGAAAAACGTTGTTCGTAGCCGCGTACTGGCAGGCGAACCGCGTATCGACGGTCGTGAAAAAGATATGATCCGTGGTCTGGATGTGCGTACTGGCGTGCTGCCGCGTACTCACGGTTCTGCGCTGTTCACCCGTGGTGAAACGCAGGCGCTGGTTACCGCAACGCTGGGTACTGCTCGTGACGCGCAGGTTCTTGATGAACTGATGGGCGAACGTACCGATACCTTCCTGTTCCACTACAACTTCCCTCCGTACTCCGTAGGCGAAACCGGCATGGTCGGTTCTCCGAAGCGTCGTGAAATTGGTCACGGTCGTCTGGCGAAGCGCGGCGTGCTGGCAGTCATGCCGGATATGGACAAATTCCCGTACACCGTACGTGTTGTGTCTGAAATCACTGAATCCAACGGTTCCTCTTCTATGGCTTCCGTGTGCGGCGCGTCTCTGGCGCTGATGGACGCAGGTGTGCCGATCAAAGCTGCCGTTGCGGGTATCGCAATGGGTCTGGTGAAAGAAGGCGACAACTACGTTGTACTGTCTGACATTTTGGGCGACGAAGATCACCTGGGCGATATGGACTTCAAAGTTGCAGGTTCCCGCGACGGTATCTCTGCACTGCAGATGGATATCAAAATTGAAGGTATCACCAAAGAGATCATGCAGGTTGCGCTGAACCAGGCTAAAGGTGCGCGTCTGCATATCCTGGGCGTAATGGAACAGGCGATCAACGCGCCGCGTGGCGATATCTCTGAGTTCGCACCGCGTATCCATACCATCAAGATCAACCCGGACAAGATCAAAGATGTTATCGGTAAAGGCGGTTCTGTAATCCGTGCTCTGACCGAAGAAACTGGCACCACCATCGAAATCGAAGATGACGGTACTGTGAAGATTGCAGCGACCGACGGCGAGAAAGCGAAACATGCTATTCGTCGTATCGAAGAGATCACTGCAGAAATCGAAGTGGGCCGCGTCTACACTGGTAAAGTGACCCGTATCGTTGACTTTGGCGCATTTGTTGCCATCGGCGGCGGTAAAGAAGGTCTGGTCCACATCTCTCAAATCGCTGACAAACGCGTTGAGAAAGTGACCGATTACCTGCAGATGGGTCAGGAAGTACCGGTGAAAGTTCTGGAAGTTGATCGCCAGGGCCGTATCCGTCTGAGCATTAAAGAAGCGACTGAGCAGTCTCAACCTGCTGCAGCACCGGAAGCTCCGGCTGCTGAACAGGGCGAGTAA", - "dna_sequence_length": 2136, - "functions": [ - "polynucleotide phosphorylase/polyadenylase" - ], - "id": "CDS_3111", - "location": [ - [ - "NC_000913", - 3311168, - "-", - 2136 - ] - ], - "md5": "8f579845760a991ca9898f4280e192e6", - "parent_gene": "", - "protein_md5": "82023d760233f9ac07264b5f659b2e18", - "protein_translation": "MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAQLLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQGE", - "protein_translation_length": 711, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010401" - ], - [ - "gene_synonym", - "GeneID:947686" - ], - [ - "gene_synonym", - "secC" - ], - [ - "gene_synonym", - "b3165" - ], - [ - "gene_synonym", - "GI:16131057" - ], - [ - "gene_synonym", - "rpsO" - ], - [ - "gene_synonym", - "JW3134" - ], - [ - "gene_synonym", - "EcoGene:EG10914" - ], - [ - "gene_synonym", - "NP_417634.1" - ], - [ - "gene_synonym", - "ECK3154" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADZ4" - ] - ], - "dna_sequence": "ATGTCTCTAAGTACTGAAGCAACAGCTAAAATCGTTTCTGAGTTTGGTCGTGACGCAAACGACACCGGTTCTACCGAAGTTCAGGTAGCACTGCTGACTGCACAGATCAACCACCTGCAGGGCCACTTTGCAGAGCACAAAAAAGATCACCACAGCCGTCGTGGTCTGCTGCGCATGGTTTCTCAGCGTCGTAAACTGCTCGACTACCTGAAACGTAAAGACGTAGCACGTTACACCCAGCTCATCGAGCGCCTGGGTCTGCGTCGCTAA", - "dna_sequence_length": 270, - "functions": [ - "30S ribosomal subunit protein S15" - ], - "id": "CDS_3112", - "location": [ - [ - "NC_000913", - 3311684, - "-", - 270 - ] - ], - "md5": "a8e3b9c7ace2e3d4fbb261d2fcbbfd9b", - "parent_gene": "", - "protein_md5": "85d82584bc67014d3c63ee6ceabd5751", - "protein_translation": "MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTQLIERLGLRR", - "protein_translation_length": 89, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947687" - ], - [ - "gene_synonym", - "NP_417635.1" - ], - [ - "gene_synonym", - "yhbA" - ], - [ - "gene_synonym", - "ASAP:ABE-0010404" - ], - [ - "gene_synonym", - "b3166" - ], - [ - "gene_synonym", - "GI:16131058" - ], - [ - "gene_synonym", - "JW3135" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60340" - ], - [ - "gene_synonym", - "ECK3155" - ], - [ - "gene_synonym", - "EcoGene:EG11177" - ], - [ - "gene_synonym", - "truB" - ] - ], - "dna_sequence": "ATGAGTCGTCCTCGTCGTCGCGGTCGCGACATTAACGGCGTTTTGTTGCTGGATAAACCTCAGGGTATGTCCAGCAACGATGCGCTGCAAAAAGTGAAACGTATATATAACGCCAACCGTGCCGGGCATACCGGTGCGCTGGACCCGCTGGCGACCGGCATGTTGCCGATTTGCCTCGGGGAAGCGACGAAGTTTTCCCAGTATCTGCTGGACTCCGACAAACGCTATCGGGTCATTGCGCGTCTTGGACAGCGTACCGATACTTCTGATGCCGACGGACAGATCGTTGAAGAACGTCCGGTAACCTTTAGCGCAGAGCAGCTGGCAGCGGCACTGGATACTTTCCGTGGCGATATCGAACAGATCCCTTCGATGTATTCAGCACTGAAATATCAGGGCAAAAAACTGTACGAATATGCGCGTCAGGGCATTGAAGTTCCGCGTGAAGCGCGTCCGATTACCGTTTATGAATTGCTGTTTATTCGCCATGAAGGCAATGAGCTGGAGCTGGAAATTCACTGCTCAAAAGGCACTTATATCCGCACCATCATTGATGACCTGGGTGAAAAACTCGGCTGTGGCGCGCATGTTATTTACCTGCGCCGTCTGGCGGTAAGTAAATATCCGGTTGAACGGATGGTGACCCTGGAGCACCTGCGTGAACTTGTTGAGCAAGCTGAACAGCAGGATATTCCAGCCGCGGAGTTACTTGATCCATTACTGATGCCAATGGACAGTCCAGCTTCGGACTATCCGGTGGTGAATCTTCCGTTAACGTCTTCTGTTTACTTCAAAAATGGTAACCCGGTTCGTACATCTGGTGCGCCACTGGAAGGACTGGTTCGCGTCACGGAAGGTGAGAACGGCAAATTTATCGGTATGGGCGAAATTGACGATGAAGGCCGCGTTGCGCCTCGTCGCCTGGTGGTTGAATACCCGGCGTAA", - "dna_sequence_length": 945, - "functions": [ - "tRNA pseudouridine synthase B: tRNA pseudouridine(55) synthase and putative tmRNA pseudouridine(342) synthase" - ], - "id": "CDS_3113", - "location": [ - [ - "NC_000913", - 3312777, - "-", - 945 - ] - ], - "md5": "c5eb8d0ed7feb28f325a3f198ab653df", - "parent_gene": "", - "protein_md5": "a877afa6369bea0714b17ebf98c3e804", - "protein_translation": "MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYIRTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDEGRVAPRRLVVEYPA", - "protein_translation_length": 314, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947685" - ], - [ - "gene_synonym", - "sdr-43" - ], - [ - "gene_synonym", - "ASAP:ABE-0010406" - ], - [ - "gene_synonym", - "b3167" - ], - [ - "gene_synonym", - "yhbB" - ], - [ - "gene_synonym", - "JW3136" - ], - [ - "gene_synonym", - "GI:16131059" - ], - [ - "gene_synonym", - "rbfA" - ], - [ - "gene_synonym", - "ECK3156" - ], - [ - "gene_synonym", - "EcoGene:EG11178" - ], - [ - "gene_synonym", - "NP_417636.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7G2" - ] - ], - "dna_sequence": "ATGGCGAAAGAATTTGGTCGCCCGCAGCGCGTAGCGCAGGAAATGCAAAAAGAGATCGCTCTCATCCTGCAGCGTGAAATTAAAGATCCTCGCCTGGGCATGATGACCACCGTTTCCGGTGTCGAAATGTCTCGCGACCTGGCGTATGCCAAAGTATATGTGACGTTCCTCAACGACAAAGATGAAGACGCGGTTAAAGCGGGCATCAAAGCGTTGCAAGAAGCTTCTGGTTTCATCCGCAGCCTGCTGGGGAAAGCGATGCGCCTGCGTATCGTGCCGGAACTGACCTTCTTCTACGACAACTCTCTGGTTGAAGGGATGCGCATGTCAAACCTGGTGACCAGCGTGGTCAAACATGACGAAGAACGTCGTGTTAACCCGGACGACAGCAAGGAGGACTAA", - "dna_sequence_length": 402, - "functions": [ - "30s ribosome binding factor" - ], - "id": "CDS_3114", - "location": [ - [ - "NC_000913", - 3313178, - "-", - 402 - ] - ], - "md5": "ad6a56f02b3e0232703247a97744e487", - "parent_gene": "", - "protein_md5": "3bd4474276d81e34a5f41940e5023c8f", - "protein_translation": "MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPDDSKED", - "protein_translation_length": 133, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10505" - ], - [ - "gene_synonym", - "GeneID:947684" - ], - [ - "gene_synonym", - "gicD" - ], - [ - "gene_synonym", - "b3168" - ], - [ - "gene_synonym", - "ECK3157" - ], - [ - "gene_synonym", - "infB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A705" - ], - [ - "gene_synonym", - "ssyG" - ], - [ - "gene_synonym", - "JW3137" - ], - [ - "gene_synonym", - "NP_417637.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010410" - ], - [ - "gene_synonym", - "GI:16131060" - ] - ], - "dna_sequence": "ATGACAGATGTAACGATTAAAACGCTGGCCGCAGAGCGACAGACCTCCGTGGAACGCCTGGTACAGCAATTTGCTGATGCAGGTATCCGGAAGTCTGCTGACGACTCTGTGTCTGCACAAGAGAAACAGACTTTGATTGACCACCTGAATCAGAAAAATTCAGGCCCGGACAAATTGACGCTGCAACGTAAAACACGCAGCACCCTTAACATTCCTGGTACCGGTGGAAAAAGCAAATCGGTACAAATCGAAGTCCGCAAGAAACGCACCTTTGTGAAACGCGATCCGCAAGAGGCTGAACGCCTTGCAGCGGAAGAGCAAGCGCAGCGTGAAGCGGAAGAGCAAGCCCGTCGTGAGGCAGAAGAATCGGCTAAACGCGAGGCGCAACAAAAAGCTGAACGTGAGGCCGCAGAACAAGCTAAGCGTGAAGCTGCTGAACAAGCGAAACGTGAAGCTGCGGAAAAAGACAAAGTGAGCAATCAACAAGACGATATGACTAAAAACGCCCAGGCTGAAAAAGCCCGCCGTGAGCAGGAAGCTGCAGAGCTCAAGCGTAAAGCTGAAGAAGAAGCGCGTCGTAAACTCGAAGAAGAAGCACGTCGCGTTGCTGAAGAAGCACGTCGTATGGCGGAAGAAAACAAATGGACTGATAACGCGGAACCGACTGAAGATTCCAGCGATTATCACGTCACTACTTCTCAACATGCTCGCCAGGCAGAAGACGAAAGCGATCGTGAAGTCGAAGGCGGCCGTGGCCGTGGTCGTAACGCGAAAGCAGCGCGTCCGAAGAAAGGCAACAAACACGCTGAATCAAAAGCTGATCGTGAAGAAGCACGCGCAGCAGTACGTGGCGGTAAAGGCGGAAAACGTAAAGGTTCTTCGCTGCAGCAAGGCTTCCAGAAGCCTGCTCAGGCCGTTAACCGTGACGTTGTGATCGGCGAAACTATCACCGTTGGCGAACTGGCGAACAAGATGGCGGTTAAAGGCTCTCAGGTCATCAAAGCGATGATGAAACTGGGCGCAATGGCAACCATCAACCAGGTTATCGATCAGGAAACCGCACAGCTGGTTGCTGAAGAGATGGGCCATAAAGTTATCCTGCGTCGTGAAAACGAGCTGGAAGAGGCGGTAATGAGCGACCGTGACACGGGTGCTGCGGCTGAACCGCGCGCGCCGGTTGTGACCATCATGGGTCACGTTGACCACGGTAAAACCTCTCTGCTGGACTACATTCGTTCAACGAAAGTGGCCTCTGGCGAAGCGGGCGGCATTACCCAGCACATTGGTGCATACCACGTTGAAACTGAAAACGGCATGATCACCTTCCTGGACACCCCGGGGCACGCCGCGTTTACTTCAATGCGTGCTCGTGGTGCGCAGGCAACGGACATCGTAGTCCTGGTTGTTGCTGCCGACGACGGTGTGATGCCGCAGACCATCGAAGCAATCCAGCACGCGAAAGCGGCGCAGGTACCGGTGGTGGTTGCAGTGAACAAGATCGATAAACCAGAAGCTGATCCGGATCGCGTTAAGAACGAACTCTCCCAGTACGGCATCCTGCCGGAAGAGTGGGGCGGTGAAAGCCAGTTCGTACACGTATCTGCGAAAGCGGGTACCGGTATCGATGAACTGCTGGACGCTATCCTGCTGCAGGCGGAAGTTCTGGAGCTGAAAGCGGTACGTAAAGGTATGGCGAGCGGTGCGGTTATCGAATCCTTCCTCGATAAAGGTCGTGGTCCGGTTGCTACCGTTCTGGTACGTGAAGGTACTCTGCACAAGGGCGATATCGTTCTGTGTGGCTTCGAATACGGTCGTGTTCGTGCGATGCGTAACGAACTGGGTCAGGAAGTGCTGGAAGCGGGTCCGTCCATTCCGGTGGAAATCCTCGGCCTGTCCGGCGTACCGGCTGCGGGTGATGAAGTTACCGTTGTACGTGACGAGAAGAAAGCGCGTGAAGTTGCACTCTATCGTCAGGGTAAATTCCGCGAAGTTAAACTGGCGCGTCAGCAGAAATCTAAACTCGAGAACATGTTCGCCAACATGACCGAAGGCGAAGTTCACGAAGTGAATATCGTCCTGAAGGCAGACGTACAGGGTTCTGTCGAAGCGATCTCCGACTCCTTGCTGAAACTGTCTACTGACGAAGTTAAAGTGAAGATCATCGGTTCTGGCGTAGGTGGTATCACCGAAACCGACGCCACCCTGGCTGCGGCGTCCAACGCCATCCTGGTTGGCTTTAACGTACGTGCTGATGCCTCTGCACGTAAAGTGATTGAAGCGGAAAGCCTGGATCTGCGTTACTACTCCGTCATCTATAACCTGATTGACGAAGTGAAAGCGGCGATGAGCGGTATGCTGTCTCCGGAACTGAAACAGCAGATTATCGGTCTGGCGGAAGTTCGTGACGTGTTCAAATCGCCGAAATTTGGTGCCATCGCAGGCTGTATGGTTACCGAAGGTGTGGTTAAACGTCACAACCCGATCCGCGTTCTGCGTGACAACGTGGTTATCTACGAAGGCGAGCTGGAGTCCCTGCGCCGCTTCAAAGATGACGTTAACGAAGTCCGTAACGGTATGGAATGTGGTATCGGCGTTAAGAACTACAACGACGTCCGCACTGGCGATGTGATCGAAGTATTCGAAATCATCGAGATCCAACGTACCATTGCTTAA", - "dna_sequence_length": 2673, - "functions": [ - "translation initiation factor IF-2" - ], - "id": "CDS_3115", - "location": [ - [ - "NC_000913", - 3316014, - "-", - 2673 - ] - ], - "md5": "5532978c0f8641e5ca4aa1e7e1e1ed0a", - "parent_gene": "", - "protein_md5": "bf16af9c81402c4ccf167b4d9487a2d0", - "protein_translation": "MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQTLIDHLNQKNSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREAEESAKREAQQKAEREAAEQAKREAAEQAKREAAEKDKVSNQQDDMTKNAQAEKARREQEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTDNAEPTEDSSDYHVTTSQHARQAEDESDREVEGGRGRGRNAKAARPKKGNKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRTGDVIEVFEIIEIQRTIA", - "protein_translation_length": 890, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3158" - ], - [ - "gene_synonym", - "GI:16131061" - ], - [ - "gene_synonym", - "GeneID:947682" - ], - [ - "gene_synonym", - "JW3138" - ], - [ - "gene_synonym", - "b3169" - ], - [ - "gene_synonym", - "NP_417638.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFF6" - ], - [ - "gene_synonym", - "EcoGene:EG10665" - ], - [ - "gene_synonym", - "nusA" - ], - [ - "gene_synonym", - "ASAP:ABE-0010413" - ] - ], - "dna_sequence": "ATGAACAAAGAAATTTTGGCTGTAGTTGAAGCCGTATCCAATGAAAAGGCGCTACCTCGCGAGAAGATTTTCGAAGCATTGGAAAGCGCGCTGGCGACAGCAACAAAGAAAAAATATGAACAAGAGATCGACGTCCGCGTACAGATCGATCGCAAAAGCGGTGATTTTGACACTTTCCGTCGCTGGTTAGTTGTTGATGAAGTCACCCAGCCGACCAAGGAAATCACCCTTGAAGCCGCACGTTATGAAGATGAAAGCCTGAACCTGGGCGATTACGTTGAAGATCAGATTGAGTCTGTTACCTTTGACCGTATCACTACCCAGACGGCAAAACAGGTTATCGTGCAGAAAGTGCGTGAAGCCGAACGTGCGATGGTGGTTGATCAGTTCCGTGAACACGAAGGTGAAATCATCACCGGCGTGGTGAAAAAAGTAAACCGCGACAACATCTCTCTGGATCTGGGCAACAACGCTGAAGCCGTGATCCTGCGCGAAGATATGCTGCCGCGTGAAAACTTCCGCCCTGGCGACCGCGTTCGTGGCGTGCTCTATTCCGTTCGCCCGGAAGCGCGTGGCGCGCAACTGTTCGTCACTCGTTCCAAGCCGGAAATGCTGATCGAACTGTTCCGTATTGAAGTGCCAGAAATCGGCGAAGAAGTGATTGAAATTAAAGCAGCGGCTCGCGATCCGGGTTCTCGTGCGAAAATCGCGGTGAAAACCAACGATAAACGTATCGATCCGGTAGGTGCTTGCGTAGGTATGCGTGGCGCGCGTGTTCAGGCGGTGTCTACTGAACTGGGTGGCGAGCGTATCGATATCGTCCTGTGGGATGATAACCCGGCGCAGTTCGTGATTAACGCAATGGCACCGGCAGACGTTGCTTCTATCGTGGTGGATGAAGATAAACACACCATGGATATCGCCGTTGAAGCCGGTAACCTGGCGCAGGCGATTGGCCGTAACGGTCAGAACGTGCGTCTGGCTTCGCAGCTGAGCGGTTGGGAACTCAACGTGATGACCGTTGACGACCTGCAGGCTAAGCATCAGGCGGAAGCGCACGCAGCGATCGACACCTTCACCAAATATCTCGACATCGACGAAGACTTCGCGACTGTTCTGGTAGAAGAAGGCTTCTCGACGCTGGAAGAATTGGCCTATGTGCCGATGAAAGAGCTGTTGGAAATCGAAGGCCTTGATGAGCCGACCGTTGAAGCACTGCGCGAGCGTGCTAAAAATGCACTGGCCACCATTGCACAGGCCCAGGAAGAAAGCCTCGGTGATAACAAACCGGCTGACGATCTGCTGAACCTTGAAGGGGTAGATCGTGATTTGGCATTCAAACTGGCCGCCCGTGGCGTTTGTACGCTGGAAGATCTCGCCGAACAGGGCATTGATGATCTGGCTGATATCGAAGGGTTGACCGACGAAAAAGCCGGAGCACTGATTATGGCTGCCCGTAATATTTGCTGGTTCGGTGACGAAGCGTAA", 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"gene_synonym", - "yhbC" - ], - [ - "gene_synonym", - "GeneID:947680" - ], - [ - "gene_synonym", - "GI:226524751" - ], - [ - "gene_synonym", - "ECK3159" - ], - [ - "gene_synonym", - "NP_417639.6" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8A8" - ], - [ - "gene_synonym", - "EcoGene:EG11179" - ], - [ - "gene_synonym", - "ASAP:ABE-0010417" - ], - [ - "gene_synonym", - "JW5533" - ] - ], - "dna_sequence": "TTGTCCACATTAGAGCAAAAATTAACAGAGATGATTACTGCGCCAGTTGAGGCCCTGGGTTTTGAACTGGTTGGCATCGAATTTATTCGCGGTCGCACATCCACACTGCGCATCTATATTGATAGTGAAGATGGCATCAATGTTGATGATTGTGCTGATGTGAGCCACCAGGTAAGTGCTGTGCTGGATGTTGAAGATCCCATCACCGTTGCTTATAACCTGGAAGTCTCCTCACCGGGTCTCGATCGCCCACTGTTCACGGCTGAACACTACGCCCGTTTTGTCGGAGAAGAGGTGACTCTGGTTCTCCGTATGGCGGTACAAAACCGTCGTAAATGGCAGGGCGTTATCAAAGCGGTAGACGGTGAAATGATCACAGTTACCGTCGAAGGTAAAGATGAAGTGTTCGCGCTGAGTAATATCCAGAAGGCGAACCTGGTTCCCCACTTTTAA", - "dna_sequence_length": 453, - "functions": [ - "ribosome maturation factor for 30S subunits" - ], - "id": "CDS_3117", - "location": [ - [ - "NC_000913", - 3318006, - "-", - 453 - ] - ], - "md5": "7a8bb91b82285bc3b9ad3bd784e03399", - "parent_gene": "", - "protein_md5": "e5fe4d5ca622d49d8545d7262eedb937", - "protein_translation": "MSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF", - "protein_translation_length": 150, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3172" - ], - [ - "gene_synonym", - "GI:16131063" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6E4" - ], - [ - "gene_synonym", - "ASAP:ABE-0010428" - ], - [ - "gene_synonym", - "Arg6" - ], - [ - "gene_synonym", - "ECK3161" - ], - [ - "gene_synonym", - "NP_417640.1" - ], - [ - "gene_synonym", - "EcoGene:EG10068" - ], - [ - "gene_synonym", - "JW3140" - ], - [ - "gene_synonym", - "argE" - ], - [ - "gene_synonym", - "GeneID:947590" - ], - [ - "gene_synonym", - "argG" - ] - ], - "dna_sequence": "ATGACGACGATTCTCAAGCATCTCCCGGTAGGTCAACGTATTGGTATCGCTTTTTCTGGCGGTCTGGACACCAGTGCCGCACTGCTGTGGATGCGACAAAAGGGAGCGGTTCCTTATGCATATACTGCAAACCTGGGCCAGCCAGACGAAGAGGATTATGATGCGATCCCTCGTCGTGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATGCTGAACTGCAGATTTACAAACCGTGGCTTGATACTGACTTTATTGATGAACTGGGCGGCCGTCATGAGATGTCTGAATTTATGATTGCCTGCGGTTTCGACTACAAAATGTCTGTCGAAAAAGCCTACTCCACAGACTCCAACATGCTTGGTGCAACGCATGAAGCGAAGGATCTGGAATACCTCAACTCCAGCGTCAAAATCGTCAACCCGATTATGGGCGTGAAATTCTGGGATGAGAGCGTGAAGATCCCGGCAGAAGAAGTCACAGTACGCTTTGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTGACTCCCAGGCGCTGATGCTGCGTGACTCTCTGCAACGCTGGGTTGCCAGCCAGATCACTGGTGAAGTTACCCTGGAGCTGCGCCGTGGGAACGATTATTCAATCCTGAATACCGTCTCAGAGAACCTGACCTACAAGCCAGAGCGTCTGACGATGGAAAAAGGCGACTCGGTGTTCTCGCCAGATGATCGTATTGGTCAATTGACCATGCGTAACCTGGATATCACTGATACCCGCGAGAAACTTTTCGGTTATGCCAAAACTGGCCTGCTTTCCTCCTCTGCCGCTTCAGGCGTGCCGCAGGTGGAGAATCTGGAAAACAAAGGCCAGTAA", 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"gene_synonym", - "ECK3162" - ], - [ - "gene_synonym", - "ASAP:ABE-0010430" - ], - [ - "gene_synonym", - "GeneID:947711" - ], - [ - "gene_synonym", - "NP_417641.4" - ], - [ - "gene_synonym", - "JW5534" - ], - [ - "gene_synonym", - "GI:90111552" - ], - [ - "gene_synonym", - "yhbX" - ] - ], - "dna_sequence": "ATGACAGTATTCAACAAATTTGCTAGAACTTTTAAATCTCATTGGTTGTTGTATCTTTGTGTTATTGTTTTTGGTATTACGAACTTAGTCGCTTCTTCCGGAGCGCATATGGTTCAGCGCTTGCTGTTCTTCGTTCTGACCATCCTGGTTGTAAAACGTATATCATCCCTTCCGCTTCGCCTGCTTGTTGCCGCACCATTTGTGTTACTGACTGCGGCAGACATGAGTATTAGCCTCTATTCATGGTGTACCTTTGGTACAACTTTCAATGATGGATTTGCGATTAGTGTGCTCCAGAGTGATCCGGATGAAGTTGTCAAAATGCTGGGGATGTATATCCCTTATCTATGTGCCTTTGCTTTTTTATCCCTTCTTTTTTTGGCAGTAATAATAAAATATGATGTTTCCTTGCCGACAAAAAAAGTGACAGGAATATTATTGCTGATTGTCATTTCGGGCAGTTTATTTTCCGCTTGTCAATTTGCTTATAAAGATGCAAAAAATAAAAAAGCGTTCAGTCCATATATACTAGCGTCGCGATTTGCTACCTATACGCCGTTTTTCAATCTCAACTATTTTGCTTTAGCAGCGAAAGAGCATCAAAGATTACTCTCAATTGCAAACACGGTGCCGTATTTTCAATTATCAGTCAGGGATACAGGTATTGATACCTACGTGTTGATTGTGGGGGAGTCTGTACGTGTCGACAATATGTCTTTGTATGGATATACACGCTCTACGACACCGCAAGTTGAAGCACAAAGAAAACAGATCAAACTGTTTAATCAAGCAATAAGCGGCGCACCTTACACTGCGCTGTCGGTTCCCCTTTCTTTAACTGCTGATTCTGTTTTGAGTCATGACATTCATAATTACCCCGACAACATTATTAATATGGCTAATCAAGCAGGATTTCAGACTTTCTGGCTAAGCTCGCAATCCGCTTTTCGGCAGAATGGTACAGCAGTTACCAGTATCGCCATGCGCGCCATGGAAACAGTTTATGTCAGAGGATTTGATGAATTGTTGTTGCCGCATTTATCGCAAGCATTACAGCAAAATACGCAGCAAAAGAAACTGATTGTTCTTCATTTAAATGGAAGCCATGAACCGGCTTGTAGCGCCTATCCGCAATCCAGCGCCGTGTTTCAACCGCAGGACGATCAGGATGCCTGCTATGACAACTCCATTCATTACACAGATAGTTTGCTAGGTCAGGTTTTTGAATTATTAAAAGATCGCCGCGCCTCGGTCATGTATTTTGCCGACCACGGCCTGGAACGTGACCCTACGAAGAAGAACGTCTATTTTCATGGAGGCAGGGAGGCTAGCCAGCAGGCATATCATGTCCCGATGTTTATCTGGTATAGCCCCGTTCTTGGGGATGGCGTGGATCGCACAACGGAAAACAACATCTTTTCGACAGCTTACAATAATTACCTTATTAATGCGTGGATGGGGGTAACAAAGCCGGAACAGCCGCAAACGCTTGAGGAAGTGATTGCACACTATAAAGGAGACTCACGGGTTGTGGATGCAAACCATGATGTTTTCGATTATGTGATGCTCAGAAAGGAGTTTACAGAGGATAAGCAAGGTAACCCCACCCCTGAAGGGCAGGGTTGA", - "dna_sequence_length": 1626, - "functions": [ - "putative EptAB family phosphoethanolamine transferase, inner membrane protein" - ], - "id": "CDS_3119", - "location": [ - [ - "NC_000913", - 3321613, - "-", - 1626 - ] - ], - "md5": "c7f44e04208957dc03e967b5abe0a091", - "parent_gene": "", - "protein_md5": "4e77b0e09b19dc2f23a44de1f80f2dfa", - "protein_translation": "MTVFNKFARTFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFFVLTILVVKRISSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDPDEVVKMLGMYIPYLCAFAFLSLLFLAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQFAYKDAKNKKAFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVRDTGIDTYVLIVGESVRVDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVPLSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETVYVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDACYDNSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHVPMFIWYSPVLGDGVDRTTENNIFSTAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDSRVVDANHDVFDYVMLRKEFTEDKQGNPTPEGQG", - "protein_translation_length": 541, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131065" - ], - [ - "gene_synonym", - "secG" - ], - [ - "gene_synonym", - "b3175" - ], - [ - "gene_synonym", - "GeneID:947720" - ], - [ - "gene_synonym", - "NP_417642.1" - ], - [ - "gene_synonym", - "prlH" - ], - [ - "gene_synonym", - "ECK3164" - ], - [ - "gene_synonym", - "EcoGene:EG12095" - ], - [ - "gene_synonym", - "JW3142" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG99" - ], - [ - "gene_synonym", - "ASAP:ABE-0010436" - ] - ], - "dna_sequence": "ATGTATGAAGCTCTTTTAGTAGTTTTCCTTATTGTGGCAATTGGCCTTGTTGGTCTGATCATGCTGCAGCAAGGTAAAGGCGCTGATATGGGAGCCTCCTTCGGAGCAGGCGCTTCCGCTACGCTGTTTGGTTCAAGTGGTTCTGGTAACTTCATGACCCGCATGACGGCGCTGCTGGCAACGTTATTCTTCATCATCAGTCTGGTGCTGGGTAACATCAATAGCAACAAAACCAATAAAGGTAGCGAATGGGAAAATCTGAGTGCACCGGCGAAAACCGAACAAACTCAGCCAGCTGCTCCGGCTAAGCCGACCAGCGATATCCCGAACTAA", - "dna_sequence_length": 333, - "functions": [ - "preprotein translocase membrane subunit" - ], - "id": "CDS_3120", - "location": [ - [ - "NC_000913", - 3322505, - "-", - 333 - ] - ], - "md5": "a9ecc1d4e5c3039bb43ce0935a9dfa90", - "parent_gene": "", - "protein_md5": "c9d64c9174aefb2a599ee9a9f81fde03", - "protein_translation": "MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPAKPTSDIPN", - "protein_translation_length": 110, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417643.1" - ], - [ - "gene_synonym", - "mrsA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31120" - ], - [ - "gene_synonym", - "yhbF" - ], - [ - "gene_synonym", - "b3176" - ], - [ - "gene_synonym", - "EcoGene:EG11553" - ], - [ - "gene_synonym", - "GeneID:947692" - ], - [ - "gene_synonym", - "ASAP:ABE-0010439" - ], - [ - "gene_synonym", - "GI:16131066" - ], - [ - "gene_synonym", - "ECK3165" - ], - [ - "gene_synonym", - "JW3143" - ], - [ - "gene_synonym", - "glmM" - ] - ], - "dna_sequence": "ATGAGTAATCGTAAATATTTCGGTACCGATGGGATTCGTGGTCGTGTAGGGGATGCGCCGATCACACCTGATTTTGTGCTTAAGCTGGGTTGGGCCGCGGGTAAAGTGCTGGCGCGCCACGGCTCCCGTAAGATTATTATTGGTAAAGACACGCGTATTTCTGGCTATATGCTGGAGTCAGCACTGGAAGCGGGTCTGGCGGCAGCGGGCCTTTCCGCACTCTTCACTGGCCCGATGCCAACACCGGCCGTGGCTTATCTGACGCGTACCTTCCGCGCAGAGGCCGGAATTGTGATATCTGCATCGCATAACCCGTTCTACGATAATGGCATTAAATTCTTCTCTATCGACGGCACCAAACTGCCGGATGCGGTAGAAGAGGCCATCGAAGCGGAAATGGAAAAGGAGATCAGCTGCGTTGATTCGGCAGAACTGGGTAAAGCCAGCCGTATCGTTGATGCCGCGGGTCGCTATATCGAGTTTTGCAAAGCCACGTTCCCGAACGAACTTAGCCTCAGTGAACTGAAGATTGTGGTGGATTGTGCAAACGGTGCGACTTATCACATCGCGCCGAACGTGCTGCGCGAACTGGGGGCGAACGTTATCGCTATCGGTTGTGAGCCAAACGGTGTAAACATCAATGCCGAAGTGGGGGCTACCGACGTTCGCGCGCTCCAGGCTCGTGTGCTGGCTGAAAAAGCGGATCTCGGTATTGCCTTCGACGGCGATGGCGATCGCGTGATTATGGTTGACCATGAAGGCAATAAAGTCGATGGCGATCAGATCATGTATATCATCGCGCGTGAAGGTCTTCGTCAGGGCCAGCTGCGTGGTGGCGCTGTGGGTACATTGATGAGCAACATGGGGCTTGAACTGGCGCTGAAACAGTTAGGAATTCCATTTGCGCGCGCGAAAGTGGGTGACCGCTACGTACTGGAAAAAATGCAGGAGAAAGGCTGGCGTATCGGTGCAGAGAATTCCGGTCATGTGATCCTGCTGGATAAAACTACTACCGGTGACGGCATCGTTGCTGGCTTGCAGGTGCTGGCGGCGATGGCACGTAACCATATGAGCCTGCACGACCTTTGCAGCGGCATGAAAATGTTCCCGCAGATTCTGGTTAACGTACGTTACACCGCAGGTAGCGGCGATCCACTTGAGCATGAGTCAGTTAAAGCCGTGACCGCAGAGGTTGAAGCTGCGCTGGGCAACCGTGGACGCGTGTTGCTGCGTAAATCCGGCACCGAACCGTTAATTCGCGTGATGGTGGAAGGCGAAGACGAAGCGCAGGTGACTGAATTTGCACACCGCATCGCCGATGCAGTAAAAGCCGTTTAA", - "dna_sequence_length": 1338, - "functions": [ - "phosphoglucosamine mutase" - ], - "id": "CDS_3121", - "location": [ - [ - "NC_000913", - 3324070, - "-", - 1338 - ] - ], - "md5": "471b7e1e6a206efb7be94e87bee953f8", - "parent_gene": "", - "protein_md5": "a48afbb2e862540610188d89fb0f7d0e", - "protein_translation": "MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRKIIIGKDTRISGYMLESALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISASHNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIEFCKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVGATDVRALQARVLAEKADLGIAFDGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQLRGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGWRIGAENSGHVILLDKTTTGDGIVAGLQVLAAMARNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLEHESVKAVTAEVEAALGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTEFAHRIADAVKAV", - "protein_translation_length": 445, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947691" - ], - [ - "gene_synonym", - "b3177" - ], - [ - "gene_synonym", - "dhpS" - ], - [ - "gene_synonym", - "folP" - ], - [ - "gene_synonym", - "ASAP:ABE-0010441" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC13" - ], - [ - "gene_synonym", - "ECK3166" - ], - [ - "gene_synonym", - "EcoGene:EG50011" - ], - [ - "gene_synonym", - "GI:90111553" - ], - [ - "gene_synonym", - "NP_417644.4" - ], - [ - "gene_synonym", - "JW3144" - ] - ], - "dna_sequence": "ATGAAACTCTTTGCCCAGGGTACTTCACTGGACCTTAGCCATCCTCACGTAATGGGGATCCTCAACGTCACGCCTGATTCCTTTTCGGATGGTGGCACGCATAACTCGCTGATAGATGCGGTGAAACATGCGAATCTGATGATCAACGCTGGCGCGACGATCATTGACGTTGGTGGCGAGTCCACGCGCCCAGGGGCGGCGGAAGTTAGCGTTGAAGAAGAGTTGCAACGTGTTATTCCTGTGGTTGAGGCAATTGCTCAACGCTTCGAAGTCTGGATCTCAGTCGATACATCCAAACCAGAAGTCATCCGTGAGTCAGCGAAAGTTGGCGCTCACATTATTAATGATATCCGCTCCCTTTCCGAACCTGGCGCTCTGGAGGCGGCTGCAGAAACCGGTTTACCGGTTTGTCTGATGCATATGCAGGGAAATCCAAAAACCATGCAGGAAGCTCCGAAGTATGACGATGTCTTTGCAGAAGTGAATCGCTACTTTATTGAGCAAATAGCACGTTGCGAGCAGGCGGGTATCGCAAAAGAGAAATTGTTGCTCGACCCCGGATTCGGTTTCGGTAAAAATCTCTCCCATAACTATTCATTACTGGCGCGCCTGGCTGAATTTCACCATTTCAACCTGCCGCTGTTGGTGGGTATGTCACGAAAATCGATGATTGGGCAGCTGCTGAACGTGGGGCCGTCCGAGCGCCTGAGCGGTAGTCTGGCCTGTGCGGTCATTGCCGCAATGCAAGGCGCGCACATCATTCGTGTTCATGACGTCAAAGAAACCGTAGAAGCGATGCGGGTGGTGGAAGCCACTCTGTCTGCAAAGGAAAACAAACGCTATGAGTAA", - "dna_sequence_length": 849, - "functions": [ - "7,8-dihydropteroate synthase" - ], - "id": "CDS_3122", - "location": [ - [ - "NC_000913", - 3324911, - "-", - 849 - ] - ], - "md5": "e9a40b6318df99c73ea9b8b6a09e43aa", - "parent_gene": "", - "protein_md5": "3e5a1611818dc3e68ad57f45d999d7a6", - "protein_translation": "MKLFAQGTSLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAKENKRYE", - "protein_translation_length": 282, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "std" - ], - [ - "gene_synonym", - "tolZ" - ], - [ - "gene_synonym", - "mrsC" - ], - [ - "gene_synonym", - "hflB" - ], - [ - "gene_synonym", - "NP_417645.1" - ], - [ - "gene_synonym", - "EcoGene:EG11506" - ], - [ - "gene_synonym", - "ASAP:ABE-0010444" - ], - [ - "gene_synonym", - "b3178" - ], - [ - "gene_synonym", - "GI:16131068" - ], - [ - "gene_synonym", - "ftsH" - ], - [ - "gene_synonym", - "GeneID:947690" - ], - [ - "gene_synonym", - "ECK3167" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAI3" - ], - [ - "gene_synonym", - "JW3145" - ] - ], - "dna_sequence": "ATGGCGAAAAACCTAATACTCTGGCTGGTCATTGCCGTTGTGCTGATGTCAGTATTCCAGAGCTTTGGGCCCAGCGAGTCTAATGGCCGTAAGGTGGATTACTCTACCTTCCTACAAGAGGTCAATAACGACCAGGTTCGTGAAGCGCGTATCAACGGACGTGAAATCAACGTTACCAAGAAAGATAGTAACCGTTATACCACTTACATTCCGGTTCAGGATCCGAAATTACTGGATAACCTGTTGACCAAGAACGTCAAGGTTGTCGGTGAACCGCCTGAAGAACCAAGCCTGCTGGCTTCTATCTTCATCTCCTGGTTCCCGATGCTGTTGCTGATTGGTGTCTGGATCTTCTTCATGCGTCAAATGCAGGGCGGCGGTGGCAAAGGTGCCATGTCGTTTGGTAAGAGCAAAGCGCGCATGCTGACGGAAGATCAGATCAAAACGACCTTTGCTGACGTTGCGGGCTGCGACGAAGCAAAAGAAGAAGTTGCTGAACTGGTTGAGTATCTGCGCGAGCCGAGCCGCTTCCAGAAACTCGGCGGTAAGATCCCGAAAGGCGTCTTGATGGTCGGTCCTCCGGGTACCGGTAAAACGCTGCTGGCGAAAGCGATTGCAGGCGAAGCGAAAGTTCCGTTCTTTACTATCTCCGGTTCTGACTTCGTAGAAATGTTCGTCGGTGTGGGTGCATCCCGTGTTCGTGACATGTTCGAACAGGCGAAGAAAGCGGCACCGTGCATCATCTTTATCGATGAAATCGACGCCGTAGGCCGCCAGCGTGGCGCTGGTCTGGGCGGTGGTCACGATGAACGTGAACAGACTCTGAACCAGATGCTGGTTGAGATGGATGGCTTCGAAGGTAACGAAGGTATCATCGTTATCGCCGCGACTAACCGTCCGGACGTTCTCGACCCGGCCCTGCTGCGTCCTGGCCGTTTCGACCGTCAGGTTGTGGTCGGCTTGCCAGATGTTCGCGGTCGTGAGCAGATCCTGAAAGTTCACATGCGTCGCGTACCATTGGCACCCGATATCGACGCGGCAATCATTGCCCGTGGTACTCCTGGTTTCTCCGGTGCTGACCTGGCGAACCTGGTGAACGAAGCGGCACTGTTCGCTGCTCGTGGCAACAAACGCGTTGTGTCGATGGTTGAGTTCGAGAAAGCGAAAGACAAAATCATGATGGGTGCGGAACGTCGCTCCATGGTGATGACGGAAGCGCAGAAAGAATCGACGGCTTACCACGAAGCGGGTCATGCGATTATCGGTCGCCTGGTGCCGGAACACGATCCGGTGCACAAAGTGACGATTATCCCACGCGGTCGTGCGCTGGGTGTGACTTTCTTCTTGCCTGAGGGCGACGCAATCAGCGCCAGCCGTCAGAAACTGGAAAGCCAGATTTCTACGCTGTACGGTGGTCGTCTGGCAGAAGAGATCATCTACGGGCCGGAACATGTATCTACCGGTGCGTCCAACGATATTAAAGTTGCGACCAACCTGGCACGTAACATGGTGACTCAGTGGGGCTTCTCTGAGAAATTGGGTCCACTGCTGTACGCGGAAGAAGAAGGTGAAGTGTTCCTCGGCCGTAGCGTAGCGAAAGCGAAACATATGTCCGATGAAACTGCACGTATCATCGACCAGGAAGTGAAAGCACTGATTGAGCGTAACTATAATCGTGCGCGTCAGCTTCTGACCGACAATATGGATATTCTGCATGCGATGAAAGATGCTCTCATGAAATATGAGACTATCGACGCACCGCAGATTGATGACCTGATGGCACGTCGCGATGTACGTCCGCCAGCGGGCTGGGAAGAACCAGGCGCTTCTAACAATTCTGGCGACAATGGTAGTCCAAAGGCTCCTCGTCCGGTTGATGAACCGCGTACGCCGAACCCGGGTAACACCATGTCAGAGCAGTTAGGCGACAAGTAA", - "dna_sequence_length": 1935, - "functions": [ - "protease, ATP-dependent zinc-metallo" - ], - "id": "CDS_3123", - "location": [ - [ - "NC_000913", - 3326935, - "-", - 1935 - ] - ], - "md5": "85c865503dc29c19b9b2727c18c29c76", - "parent_gene": "", - "protein_md5": "be9a89b705d157b2d7358a7f019fb0f8", - "protein_translation": "MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLMARRDVRPPAGWEEPGASNNSGDNGSPKAPRPVDEPRTPNPGNTMSEQLGDK", - "protein_translation_length": 644, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "mrsF" - ], - [ - "gene_synonym", - "rlmE" - ], - [ - "gene_synonym", - "NP_417646.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010447" - ], - [ - "gene_synonym", - "b3179" - ], - [ - "gene_synonym", - "GI:16131069" - ], - [ - "gene_synonym", - "ftsJ" - ], - [ - "gene_synonym", - "GeneID:947689" - ], - [ - "gene_synonym", - "rrmJ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C0R7" - ], - [ - "gene_synonym", - "EcoGene:EG11507" - ], - [ - "gene_synonym", - "ECK3168" - ], - [ - "gene_synonym", - "JW3146" - ] - ], - "dna_sequence": "ATGACAGGTAAGAAGCGTTCTGCCAGCTCCAGCCGCTGGCTTCAGGAACACTTTAGCGATAAATATGTTCAACAGGCACAGAAAAAGGGGTTACGTTCCCGTGCCTGGTTTAAACTTGATGAAATACAGCAAAGTGACAAACTCTTTAAACCGGGAATGACGGTTGTCGACCTTGGTGCTGCTCCGGGTGGTTGGTCACAATATGTGGTCACCCAAATTGGCGGCAAAGGCCGCATCATCGCTTGCGATCTTTTACCTATGGATCCTATCGTTGGTGTGGACTTTCTTCAGGGCGATTTTCGTGATGAACTGGTGATGAAAGCACTGCTGGAGCGCGTTGGCGACAGCAAAGTCCAGGTTGTCATGTCCGATATGGCACCAAACATGAGCGGAACACCGGCGGTGGATATCCCCCGTGCCATGTATCTGGTGGAACTGGCGCTAGAAATGTGTCGTGATGTATTAGCGCCAGGTGGCAGTTTTGTAGTGAAGGTGTTCCAGGGCGAAGGTTTCGATGAGTATCTAAGGGAAATTCGCTCCCTGTTTACGAAGGTCAAAGTTCGTAAGCCGGACTCTTCTCGTGCACGTTCGCGGGAAGTGTATATTGTAGCGACCGGGCGTAAACCCTAA", - "dna_sequence_length": 630, - "functions": [ - "23S rRNA U2552 2'-O-ribose methyltransferase, SAM-dependent" - ], - "id": "CDS_3124", - "location": [ - [ - "NC_000913", - 3327664, - "-", - 630 - ] - ], - "md5": "991f53c8ee287dd9061c88c911205b6c", - "parent_gene": "", - "protein_md5": "a04f362abdb231dcff8b802527688b2f", - "protein_translation": "MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP", - "protein_translation_length": 209, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3180" - ], - [ - "gene_synonym", - "EcoGene:EG12794" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGK4" - ], - [ - "gene_synonym", - "ASAP:ABE-0010452" - ], - [ - "gene_synonym", - "JW3147" - ], - [ - "gene_synonym", - "NP_417647.1" - ], - [ - "gene_synonym", - "GeneID:947688" - ], - [ - "gene_synonym", - "GI:16131070" - ], - [ - "gene_synonym", - "ECK3169" - ], - [ - "gene_synonym", - "yhbY" - ] - ], - "dna_sequence": "ATGAATCTGAGTACTAAACAAAAACAGCACCTGAAAGGTCTGGCACATCCGCTCAAGCCAGTTGTTCTGCTTGGCAGTAATGGTTTGACCGAAGGGGTGCTGGCCGAGATTGAACAAGCGTTAGAGCACCATGAACTCATCAAGGTGAAAATCGCCACCGAAGATCGCGAAACTAAAACCTTGATCGTGGAAGCTATCGTGCGCGAAACCGGCGCCTGTAATGTACAGGTCATCGGTAAAACGCTGGTGCTTTATCGCCCAACTAAAGAACGTAAAATCTCGCTGCCACGCTAA", - "dna_sequence_length": 294, - "functions": [ - "RNA binding protein associated with pre-50S ribosomal subunits" - ], - "id": "CDS_3125", - "location": [ - [ - "NC_000913", - 3327790, - "+", - 294 - ] - ], - "md5": "520424889322bed688a9546a494bc9fe", - "parent_gene": "", - "protein_md5": "6430a14f5b78b1e75288bbc6f448e0c5", - "protein_translation": "MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR", - "protein_translation_length": 97, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417648.4" - ], - [ - "gene_synonym", - "GeneID:947696" - ], - [ - "gene_synonym", - "b3181" - ], - [ - "gene_synonym", - "ASAP:ABE-0010454" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6W5" - ], - [ - "gene_synonym", - "JW3148" - ], - [ - "gene_synonym", - "greA" - ], - [ - "gene_synonym", - "EcoGene:EG10415" - ], - [ - "gene_synonym", - "GI:90111554" - ], - [ - "gene_synonym", - "ECK3170" - ] - ], - "dna_sequence": "ATGCAAGCTATTCCGATGACCTTACGCGGCGCTGAAAAATTACGCGAAGAGCTGGATTTTCTGAAATCTGTGCGCCGTCCTGAAATCATTGCTGCTATCGCGGAAGCGCGTGAGCATGGCGACCTGAAAGAAAACGCCGAATACCACGCAGCTCGTGAACAGCAGGGTTTCTGCGAAGGCCGTATTAAAGACATCGAAGCCAAGCTGTCGAACGCGCAGGTGATTGATGTCACCAAAATGCCCAACAATGGGCGCGTTATTTTTGGTGCTACCGTAACGGTGCTGAATCTGGATTCTGACGAAGAACAGACTTATCGCATCGTTGGCGATGACGAAGCTGACTTTAAACAAAACCTGATTTCTGTAAACTCGCCTATTGCTCGTGGCCTGATCGGCAAAGAAGAAGATGATGTTGTGGTCATCAAAACGCCGGGCGGCGAAGTAGAATTTGAAGTAATTAAGGTGGAATACCTGTAA", - "dna_sequence_length": 477, - "functions": [ - "transcript cleavage factor" - ], - "id": "CDS_3126", - "location": [ - [ - "NC_000913", - 3328715, - "-", - 477 - ] - ], - "md5": "7f9ce8d7b0931eb05f817cfc7b3903ee", - "parent_gene": "", - "protein_md5": "f95204fe2fc7c5121ae469e673ef6f03", - "protein_translation": "MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL", - "protein_translation_length": 158, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3182" - ], - [ - "gene_synonym", - "ASAP:ABE-0010458" - ], - [ - "gene_synonym", - "GeneID:947693" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24228" - ], - [ - "gene_synonym", - "EcoGene:EG10202" - ], - [ - "gene_synonym", - "dacB" - ], - [ - "gene_synonym", - "JW3149" - ], - [ - "gene_synonym", - "ECK3171" - ], - [ - "gene_synonym", - "GI:16131072" - ], - [ - "gene_synonym", - "NP_417649.1" - ] - ], - "dna_sequence": "ATGCGATTTTCCAGATTTATCATCGGATTGACCAGCTGTATAGCGTTCAGTGTTCAGGCCGCAAATGTTGATGAGTACATTACTCAACTCCCCGCTGGTGCCAACCTTGCCCTGATGGTGCAAAAAGTCGGCGCGTCGGCCCCCGCTATTGATTACCACAGTCAGCAGATGGCGCTGCCTGCCAGTACCCAGAAAGTGATTACTGCGCTGGCGGCGTTGATTCAACTCGGCCCCGATTTTCGTTTTACCACGACGCTTGAAACCAAAGGCAATGTGGAAAACGGCGTACTTAAGGGTGACTTAGTGGCGCGATTTGGTGCCGATCCGACGTTAAAACGTCAGGATATTCGCAATATGGTCGCGACTTTGAAAAAATCTGGCGTCAACCAAATCGATGGCAATGTGTTGATAGATACCTCCATTTTCGCCAGCCACGATAAAGCCCCCGGCTGGCCATGGAATGACATGACACAATGCTTTAGCGCTCCGCCTGCCGCCGCCATAGTTGACCGCAACTGTTTCTCCGTCTCGCTCTACAGTGCCCCAAAGCCTGGTGATATGGCTTTTATACGCGTGGCATCTTATTACCCCGTTACGATGTTCAGCCAGGTACGCACCCTCCCCCGTGGTTCTGCCGAAGCGCAATACTGCGAACTGGATGTGGTGCCAGGCGACCTGAACCGCTTTACGCTGACGGGATGCCTGCCACAACGTTCTGAGCCGCTCCCGTTGGCTTTTGCCGTGCAGGATGGAGCCAGCTATGCCGGTGCAATTCTGAAAGATGAGTTAAAACAGGCGGGTATCACCTGGAGCGGAACACTGCTGCGCCAGACTCAGGTTAACGAACCTGGAACGGTAGTTGCCAGTAAACAGTCGGCCCCGCTGCACGATCTGCTTAAGATTATGCTGAAAAAGTCGGACAACATGATCGCCGATACGGTTTTCCGCATGATAGGCCATGCGCGCTTCAATGTGCCTGGAACATGGCGGGCCGGGTCGGACGCCGTGCGTCAGATCCTGCGCCAGCAAGCCGGTGTCGATATTGGAAACACCATTATTGCCGATGGTTCAGGGCTTTCGCGGCATAACCTGATTGCCCCCGCCACCATGATGCAGGTGCTGCAATACATTGCCCAACACGACAATGAACTTAACTTTATCTCCATGCTGCCGCTGGCGGGCTATGACGGCTCTTTGCAGTACCGTGCAGGTCTGCATCAGGCGGGCGTGGATGGAAAAGTCTCAGCGAAAACCGGTTCGTTGCAGGGGGTATATAACCTGGCGGGATTCATTACCACAGCGAGCGGGCAACGAATGGCGTTTGTGCAATATCTTTCTGGCTATGCAGTAGAACCTGCGGATCAGCGTAATCGCCGTATTCCGTTAGTGCGTTTTGAAAGCCGTTTGTATAAAGATATTTATCAGAACAATTAG", 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"UniProtKB/Swiss-Prot:P42641" - ], - [ - "gene_synonym", - "ASAP:ABE-0010462" - ], - [ - "gene_synonym", - "EcoGene:EG12795" - ], - [ - "gene_synonym", - "obg" - ], - [ - "gene_synonym", - "GeneID:947694" - ], - [ - "gene_synonym", - "ECK3172" - ], - [ - "gene_synonym", - "GI:16131073" - ], - [ - "gene_synonym", - "obgE" - ], - [ - "gene_synonym", - "JW3150" - ], - [ - "gene_synonym", - "yhbZ" - ], - [ - "gene_synonym", - "cgtA" - ] - ], - "dna_sequence": "ATGAAGTTTGTTGATGAAGCATCGATTCTGGTCGTTGCAGGTGATGGCGGTAATGGTTGCGTGAGCTTCCGCCGCGAAAAGTATATTCCGAAAGGCGGCCCGGATGGCGGCGACGGCGGTGATGGTGGTGACGTATGGATGGAAGCCGACGAGAACCTGAACACGCTTATCGATTATCGTTTTGAAAAATCTTTCCGTGCAGAGCGCGGTCAGAATGGCGCAAGCCGCGACTGTACCGGTAAGCGCGGTAAAGACGTGACGATTAAAGTGCCGGTAGGTACGCGTGTAATCGACCAGGGTACTGGTGAAACCATGGGCGATATGACCAAACACGGTCAGCGTCTGCTGGTTGCTAAGGGCGGCTGGCACGGTCTGGGCAATACCCGTTTCAAATCGTCCGTTAACCGTACACCGCGGCAGAAAACCAACGGCACGCCGGGCGATAAGCGCGAGCTGCTGCTGGAGCTGATGCTGCTGGCTGACGTCGGTATGTTGGGGATGCCAAACGCGGGTAAATCGACCTTTATTCGTGCGGTATCGGCGGCTAAACCGAAAGTGGCGGATTATCCGTTTACCACTCTGGTGCCAAGTCTGGGTGTGGTACGAATGGACAACGAAAAGAGCTTCGTTGTTGCCGATATTCCAGGACTGATTGAAGGCGCTGCGGAAGGCGCAGGTCTGGGCATTCGCTTCCTGAAGCACCTGGAACGTTGCCGCGTCCTGTTGCACCTCATCGATATCGATCCGATTGACGGCACCGATCCGGTTGAAAACGCGCGTATTATTATCAGCGAGCTGGAAAAATACAGCCAGGATCTGGCGACGAAACCGCGTTGGTTAGTGTTCAACAAGATCGATCTGCTGGATAAGGTAGAAGCCGAAGAGAAAGCGAAAGCGATCGCTGAGGCGCTGGGCTGGGAAGATAAATATTATCTGATCTCTGCGGCGAGTGGACTGGGCGTGAAAGATCTCTGCTGGGATGTGATGACCTTTATCATTGAAAACCCGGTCGTGCAGGCTGAAGAAGCGAAACAGCCAGAGAAAGTCGAATTCATGTGGGATGATTATCATCGCCAGCAGCTTGAAGAGATTGCTGAAGAGGATGATGAAGACTGGGATGACGACTGGGACGAAGACGACGAAGAAGGCGTTGAGTTCATTTACAAGCGTTAA", 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"gene_synonym", - "GeneID:947699" - ], - [ - "gene_synonym", - "NP_417651.1" - ], - [ - "gene_synonym", - "ECK3173" - ], - [ - "gene_synonym", - "JW3151" - ], - [ - "gene_synonym", - "GI:16131074" - ], - [ - "gene_synonym", - "EcoGene:EG11499" - ] - ], - "dna_sequence": "ATGAAGCAGCAGGCAGGCATTGGCATTCTTTTGGCGCTCACCACAGCAATTTGCTGGGGGGCGTTGCCAATCGCAATGAAGCAGGTGCTGGAGGTGATGGAACCTCCGACAATCGTGTTTTACCGTTTCTTGATGGCGAGTATTGGCCTGGGTGCCATTCTTGCGGTGAAGAAGAGGTTGCCGCCATTACGCGTGTTTCGTAAGCCACGCTGGTTGATTTTGTTGGCAGTGGCGACCGCCGGGCTGTTTGGGAACTTCATCCTGTTCAGCTCATCCTTGCAATACCTGAGTCCGACCGCTTCGCAGGTGATTGGGCAACTCTCGCCAGTTGGCATGATGGTTGCCAGCGTATTTATCCTCAAAGAGAAAATGCGCAGCACTCAGGTTGTAGGGGCATTGATGCTCCTGAGCGGCCTGGTGATGTTTTTTAACACCAGTCTGGTCGAGATATTTACAAAGCTCACCGATTACACCTGGGGAGTTATCTTTGGGGTCGGTGCGGCGACGGTTTGGGTGAGTTATGGCGTGGCGCAAAAGGTTTTATTGCGTCGGCTGGCCTCACCGCAGATCCTGTTTTTACTGTACACTTTATGTACAATTGCGCTCTTCCCTCTGGCAAAGCCTGGAGTGATAGCGCAGCTTAGCCACTGGCAGCTCGCATGTTTAATTTTTTGCGGACTGAATACCTTGGTAGGATATGGCGCCCTGGCGGAAGCGATGGCTCGCTGGCAGGCAGCGCAGGTGAGCGCGATCATCACGCTCACCCCACTGTTTACGCTGTTTTTTTCAGATCTTTTATCACTGGCCTGGCCCGATTTCTTCGCCAGACCGATGTTAAACCTTTTAGGTTATCTCGGTGCGTTTGTCGTGGTTGCGGGCGCGATGTATTCCGCCATTGGTCATCGTATTTGGGGCGGATTACGTAAGCATACAACGGTGGTATCGCAACCCCGCGCAGGCGAATGA", - "dna_sequence_length": 966, - "functions": [ - "EamA family inner membrane putative transporter" - ], - "id": "CDS_3129", - "location": [ - [ - "NC_000913", - 3332735, - "-", - 966 - ] - ], - "md5": "41cdce2202ea5942a94c800e14eb484c", - "parent_gene": "", - "protein_md5": "902bb28bbb38b20e4282f307603bca62", - "protein_translation": "MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFLMASIGLGAILAVKKRLPPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVFILKEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWGVIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQLACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHTTVVSQPRAGE", - "protein_translation_length": 321, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7L8" - ], - [ - "gene_synonym", - "GeneID:945190" - ], - [ - "gene_synonym", - "b3185" - ], - [ - "gene_synonym", - "rpz" - ], - [ - "gene_synonym", - "ASAP:ABE-0010468" - ], - [ - "gene_synonym", - "ECK3174" - ], - [ - "gene_synonym", - "NP_417652.1" - ], - [ - "gene_synonym", - "EcoGene:EG50002" - ], - [ - "gene_synonym", - "rpmA" - ], - [ - "gene_synonym", - "JW3152" - ], - [ - "gene_synonym", - "GI:16131075" - ] - ], - "dna_sequence": "ATGGCACATAAAAAGGCTGGCGGCTCCACACGTAACGGTCGCGATTCAGAAGCTAAACGCCTGGGCGTTAAGCGTTTCGGTGGCGAATCCGTTCTGGCGGGTAGCATCATCGTTCGTCAACGTGGTACCAAATTCCACGCTGGCGCTAACGTAGGTTGCGGTCGTGACCACACTCTGTTTGCTAAAGCAGACGGTAAAGTGAAATTCGAAGTTAAAGGCCCGAAAAACCGTAAATTTATCAGCATCGAAGCTGAATAA", - "dna_sequence_length": 258, - "functions": [ - "50S ribosomal subunit protein L27" - ], - "id": "CDS_3130", - "location": [ - [ - "NC_000913", - 3333119, - "-", - 258 - ] - ], - "md5": "d8d1944c957096ee3ecc4d3a9d9f998e", - "parent_gene": "", - "protein_md5": "f2a48cf62f93cb72e86a7a3f4e4c92ad", - "protein_translation": "MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE", - "protein_translation_length": 85, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010470" - ], - [ - "gene_synonym", - "b3186" - ], - [ - "gene_synonym", - "rplU" - ], - [ - "gene_synonym", - "GeneID:949057" - ], - [ - "gene_synonym", - "ECK3175" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG48" - ], - [ - "gene_synonym", - "JW3153" - ], - [ - "gene_synonym", - "GI:16131076" - ], - [ - "gene_synonym", - "EcoGene:EG50001" - ], - [ - "gene_synonym", - "NP_417653.1" - ] - ], - "dna_sequence": "ATGTACGCGGTTTTCCAAAGTGGTGGTAAACAACACCGAGTAAGCGAAGGTCAGACCGTTCGCCTGGAAAAGCTGGACATCGCAACTGGCGAAACTGTTGAGTTCGCTGAAGTGCTGATGATCGCAAACGGTGAAGAAGTCAAAATCGGCGTTCCTTTCGTTGATGGCGGCGTAATCAAAGCTGAAGTTGTTGCTCACGGTCGTGGCGAGAAAGTTAAAATCGTTAAGTTTCGTCGTCGTAAACACTATCGTAAGCAGCAGGGCCATCGTCAGTGGTTCACTGATGTGAAAATTACTGGCATCAGCGCCTAA", - "dna_sequence_length": 312, - "functions": [ - "50S ribosomal subunit protein L21" - ], - "id": "CDS_3131", - "location": [ - [ - "NC_000913", - 3333451, - "-", - 312 - ] - ], - "md5": "c17ead76e05db0632d19f0dbac2ca6b5", - "parent_gene": "", - "protein_md5": 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"aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A749" - ], - [ - "gene_synonym", - "murA" - ], - [ - "gene_synonym", - "b3189" - ], - [ - "gene_synonym", - "murZ" - ], - [ - "gene_synonym", - "ASAP:ABE-0010479" - ], - [ - "gene_synonym", - "mrbA" - ], - [ - "gene_synonym", - "GI:16131079" - ], - [ - "gene_synonym", - "GeneID:947703" - ], - [ - "gene_synonym", - "JW3156" - ], - [ - "gene_synonym", - "EcoGene:EG11358" - ], - [ - "gene_synonym", - "ECK3178" - ], - [ - "gene_synonym", - "NP_417656.1" - ] - ], - "dna_sequence": "ATGGATAAATTTCGTGTTCAGGGGCCAACGAAGCTCCAGGGCGAAGTCACAATTTCCGGCGCTAAAAATGCTGCTCTGCCTATCCTTTTTGCCGCACTACTGGCGGAAGAACCGGTAGAGATCCAGAACGTCCCGAAACTGAAAGACGTCGATACATCAATGAAGCTGCTAAGCCAGCTGGGTGCGAAAGTAGAACGTAATGGTTCTGTGCATATTGATGCCCGCGACGTTAATGTATTCTGCGCACCTTACGATCTGGTTAAAACCATGCGTGCTTCTATCTGGGCGCTGGGGCCGCTGGTAGCGCGCTTTGGTCAGGGGCAAGTTTCACTACCTGGCGGTTGTACGATCGGTGCGCGTCCGGTTGATCTACACATTTCTGGCCTCGAACAATTAGGCGCGACCATCAAACTGGAAGAAGGTTACGTTAAAGCTTCCGTCGATGGTCGTTTGAAAGGTGCACATATCGTGATGGATAAAGTCAGCGTTGGCGCAACGGTGACCATCATGTGTGCTGCAACCCTGGCGGAAGGCACCACGATTATTGAAAACGCAGCGCGTGAACCGGAAATCGTCGATACCGCGAACTTCCTGATTACGCTGGGTGCGAAAATTAGCGGTCAGGGCACCGATCGTATCGTCATCGAAGGTGTGGAACGTTTAGGCGGCGGTGTCTATCGCGTTCTGCCGGATCGTATCGAAACCGGTACTTTCCTGGTGGCGGCGGCGATTTCTCGCGGCAAAATTATCTGCCGTAACGCGCAGCCAGATACTCTCGACGCCGTGCTGGCGAAACTGCGTGACGCTGGAGCGGACATCGAAGTCGGCGAAGACTGGATTAGCCTGGATATGCATGGCAAACGTCCGAAGGCTGTTAACGTACGTACCGCGCCGCATCCGGCATTCCCGACCGATATGCAGGCCCAGTTCACGCTGTTGAACCTGGTGGCAGAAGGGACCGGGTTTATCACCGAAACGGTCTTTGAAAACCGCTTTATGCATGTGCCAGAGCTGAGCCGTATGGGCGCGCACGCCGAAATCGAAAGCAATACCGTTATTTGTCACGGTGTTGAAAAACTTTCTGGCGCACAGGTTATGGCAACCGATCTGCGTGCATCAGCAAGCCTGGTGCTGGCTGGCTGTATTGCGGAAGGGACGACGGTGGTTGATCGTATTTATCACATCGATCGTGGCTACGAACGCATTGAAGACAAACTGCGCGCTTTAGGTGCAAATATTGAGCGTGTGAAAGGCGAATAA", 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"gene_synonym", - "GI:90111555" - ], - [ - "gene_synonym", - "b3190" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9W6" - ], - [ - "gene_synonym", - "NP_417657.2" - ], - [ - "gene_synonym", - "JW3157" - ], - [ - "gene_synonym", - "ECK3179" - ], - [ - "gene_synonym", - "ibaG" - ], - [ - "gene_synonym", - "yrbA" - ] - ], - "dna_sequence": "ATGGAAAATAATGAAATTCAGAGCGTGTTGATGAACGCTCTCTCCCTCCAGGAAGTCCACGTTTCCGGCGATGGCAGCCACTTTCAGGTTATTGCCGTGGGTGAGTTGTTTGACGGCATGAGTCGGGTTAAAAAACAGCAGACGGTCTATGGTCCGCTGATGGAATATATTGCGGATAACCGCATTCATGCTGTGTCGATCAAAGCGTATACCCCTGCGGAGTGGGCGCGCGATCGCAAACTGAACGGCTTTTGA", - "dna_sequence_length": 255, - "functions": [ - "acid stress protein", - "putative BolA family transcriptional regulator" - ], - "id": "CDS_3135", - "location": [ - [ - "NC_000913", - 3336803, - "-", - 255 - ] - ], - "md5": "c6c11f0b991e30fd59e2a7f8aa9ccd42", - "parent_gene": "", - "protein_md5": "17762f76e0f81ac376f47293595200a3", - "protein_translation": 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"ATGTTTAAACGTTTAATGATGGTCGCTTTGCTGGTGATTGCACCTCTGAGTGCGGCAACCGCGGCAGACCAGACCAATCCGTATAAGCTGATGGACGAGGCGGCGCAGAAAACGTTCGATCGCCTGAAGAATGAGCAACCGCAAATTCGGGCCAACCCGGATTATCTGCGTACCATTGTTGATCAGGAACTGCTGCCATACGTACAGGTGAAATACGCCGGTGCGCTGGTGCTGGGCCAGTATTACAAGAGTGCGACCCCTGCTCAACGTGAAGCCTACTTTGCCGCTTTCCGTGAGTACCTGAAGCAGGCTTACGGTCAGGCGCTGGCGATGTATCACGGTCAAACCTATCAGATTGCGCCAGAACAGCCGCTGGGCGATAAAACCATTGTGCCTATTCGCGTTACCATTATTGACCCGAATGGCCGTCCGCCGGTGCGTCTGGACTTCCAGTGGCGTAAAAACTCCCAGACGGGCAATTGGCAGGCTTACGACATGATTGCTGAAGGCGTCAGTATGATCACCACCAAACAAAACGAGTGGGGAACGCTGCTGCGTACCAAAGGTATCGACGGCCTGACTGCGCAACTGAAATCGATTTCTCAACAGAAAATCACTCTGGAAGAGAAAAAATAA", - "dna_sequence_length": 636, - "functions": [ - "ABC transporter maintaining OM lipid asymmetry, periplasmic binding protein" - ], - "id": "CDS_3137", - "location": [ - [ - "NC_000913", - 3337891, - "-", - 636 - ] - ], - "md5": "88cd247eed2b5c86bf109327656f0773", - "parent_gene": "", - "protein_md5": "f9202d3d2ddea3d73ae6e3b73b4adb52", - "protein_translation": "MFKRLMMVALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKNEQPQIRANPDYLRTIVDQELLPYVQVKYAGALVLGQYYKSATPAQREAYFAAFREYLKQAYGQALAMYHGQTYQIAPEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGNWQAYDMIAEGVSMITTKQNEWGTLLRTKGIDGLTAQLKSISQQKITLEEKK", - "protein_translation_length": 211, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "mlaD" - ], - [ - "gene_synonym", - "ASAP:ABE-0010493" - ], - [ - "gene_synonym", - "vpsC" - ], - [ - "gene_synonym", - "EcoGene:EG12799" - ], - [ - "gene_synonym", - "b3193" - ], - [ - "gene_synonym", - "JW3160" - ], - [ - "gene_synonym", - "GI:16131083" - ], - [ - "gene_synonym", - "NP_417660.1" - ], - [ - "gene_synonym", - "GeneID:947712" - ], - [ - "gene_synonym", - "yrbD" - ], - [ - "gene_synonym", - "ECK3182" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64604" - ] - ], - "dna_sequence": "ATGCAAACGAAAAAAAATGAAATTTGGGTGGGTATCTTTTTATTAGCAGCACTGCTGGCGGCGCTGTTTGTTTGCCTGAAGGCGGCGAACGTGACGTCCATACGTACTGAACCGACCTACACGCTTTATGCGACGTTCGATAACATTGGCGGCCTGAAAGCGCGCTCTCCGGTCAGTATTGGTGGCGTTGTTGTGGGTCGGGTGGCGGATATTACGCTGGACCCGAAAACCTATCTGCCGCGCGTAACGCTGGAAATTGAACAACGTTATAACCACATTCCAGATACCAGTTCGCTGAGCATTCGTACTTCCGGCCTGCTGGGGGAACAATATCTGGCATTAAACGTCGGTTTTGAAGACCCGGAACTGGGGACTGCTATCCTGAAGGATGGCGATACAATTCAGGACACTAAGTCTGCGATGGTGCTGGAAGATCTCATTGGTCAGTTCCTTTACGGTAGTAAAGGCGATGACAATAAGAATAGTGGCGATGCGCCAGCTGCTGCGCCAGGTAATAATGAAACCACTGAACCTGTGGGTACAACGAAATAA", - "dna_sequence_length": 552, - "functions": [ - "OM lipid asymmetry maintenance protein", - "membrane-anchored ABC family periplasmic binding protein" - ], - "id": "CDS_3138", - "location": [ - [ - "NC_000913", - 3338461, - "-", - 552 - ] - ], - "md5": "23a1030ff899cdfc363aec60bec416f2", - "parent_gene": "", - "protein_md5": "e49f79e31d9df52e18a789af3b13a1f3", - "protein_translation": "MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNKNSGDAPAAAPGNNETTEPVGTTK", - "protein_translation_length": 183, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "mlaE" - ], - [ - "gene_synonym", - "ASAP:ABE-0010495" - ], - [ - "gene_synonym", - "GeneID:947732" - ], - [ - "gene_synonym", - "b3194" - ], - [ - "gene_synonym", - "vpsB" - ], - [ - "gene_synonym", - "JW3161" - ], - [ - "gene_synonym", - "NP_417661.1" - ], - [ - "gene_synonym", - "GI:16131084" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64606" - ], - [ - "gene_synonym", - "yrbE" - ], - [ - "gene_synonym", - "EcoGene:EG12800" - ], - [ - "gene_synonym", - "ECK3183" - ] - ], - "dna_sequence": "ATGCTGTTAAATGCGCTGGCGTCGCTCGGACATAAAGGGATTAAAACCCTGAGAACGTTCGGGCGGGCCGGGTTAATGTTATTCAATGCGCTGGTCGGCAAACCGGAATTTCGCAAACATGCGCCGCTGCTGGTGCGCCAGCTCTATAATGTCGGCGTCCTGTCGATGCTGATTATTGTGGTTTCTGGCGTGTTCATCGGAATGGTGTTGGGGCTGCAAGGTTATCTGGTTCTGACCACTTATAGTGCGGAAACCAGTCTGGGTATGCTGGTGGCGTTATCGCTACTGCGTGAACTGGGGCCGGTGGTTGCCGCGTTGTTGTTTGCCGGGCGTGCTGGTTCGGCGCTAACCGCAGAAATCGGCCTGATGCGCGCTACAGAGCAACTCTCCAGTATGGAGATGATGGCGGTGGATCCGCTGCGTCGGGTTATTTCTCCCCGTTTCTGGGCTGGGGTTATTTCATTACCACTGTTGACGGTTATTTTCGTCGCCGTGGGGATCTGGGGCGGATCTCTGGTCGGCGTCAGTTGGAAAGGCATTGATAGCGGGTTCTTCTGGTCGGCAATGCAAAATGCCGTCGACTGGCGTATGGATCTGGTCAACTGTCTGATTAAGAGCGTGGTGTTCGCCATCACGGTGACGTGGATTTCGTTGTTTAACGGCTACGACGCCATCCCGACGTCTGCCGGGATTAGCCGGGCAACCACTCGCACCGTTGTCCACTCGTCTCTGGCTGTTCTGGGGCTGGATTTTGTGCTGACCGCATTGATGTTTGGGAATTGA", - "dna_sequence_length": 783, - "functions": [ - "ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein" - ], - "id": "CDS_3139", - "location": [ - [ - "NC_000913", - 3339248, - "-", - 783 - ] - ], - "md5": "ca4ee5cdc41d8858e624b49c28d8e3a3", - "parent_gene": "", - "protein_md5": "8f27ec0d780bfc7bb9f01b24673b9a1a", - "protein_translation": "MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLLVRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPVVAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTVIFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISLFNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFGN", - "protein_translation_length": 260, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "mlaF" - ], - [ - "gene_synonym", - "GeneID:947729" - ], - [ - "gene_synonym", - "NP_417662.1" - ], - [ - "gene_synonym", - "b3195" - ], - [ - "gene_synonym", - "vpsA" - ], - [ - "gene_synonym", - "ASAP:ABE-0010498" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63386" - ], - [ - "gene_synonym", - "GI:16131085" - ], - [ - "gene_synonym", - "JW3162" - ], - [ - "gene_synonym", - "ECK3184" - ], - [ - "gene_synonym", - "yrbF" - ], - [ - "gene_synonym", - "EcoGene:EG12801" - ] - ], - "dna_sequence": "ATGGAGCAGTCTGTGGCGAATTTAGTCGATATGCGCGATGTCAGTTTTACGCGTGGCAATCGCTGCATCTTCGATAATATTTCCCTGACCGTGCCGCGAGGGAAGATCACGGCGATCATGGGGCCATCGGGCATCGGTAAAACGACGCTACTCCGTCTGATTGGCGGGCAAATCGCACCAGATCATGGTGAGATCCTTTTCGATGGTGAGAATATTCCGGCGATGTCTCGTTCGCGCCTGTATACAGTGCGCAAACGGATGAGCATGTTATTTCAGTCCGGGGCGTTGTTCACTGATATGAACGTATTTGACAACGTCGCCTATCCACTGCGCGAACATACCCAACTTCCCGCGCCATTGTTGCATAGTACGGTGATGATGAAGCTGGAGGCCGTGGGGCTGCGTGGAGCGGCTAAACTAATGCCTTCTGAACTTTCCGGTGGGATGGCGCGGCGTGCAGCGCTGGCGCGTGCGATTGCGCTGGAGCCGGATCTCATCATGTTTGATGAACCTTTTGTTGGGCAAGATCCCATCACCATGGGCGTACTGGTGAAGCTGATTTCTGAGCTGAACAGCGCGCTGGGCGTGACTTGTGTGGTGGTTTCTCACGATGTGCCGGAAGTGTTAAGTATTGCGGATCACGCCTGGATCCTGGCGGACAAAAAAATTGTCGCTCATGGCAGTGCCCAGGCGTTGCAGGCGAATCCTGATCCGCGCGTACGTCAGTTTCTGGACGGGATAGCTGACGGGCCTGTTCCGTTCCGCTATCCTGCCGGCGATTATCACGCTGATCTTTTACCAGGGAGTTAA", - "dna_sequence_length": 810, - "functions": [ - "ABC transporter maintaining OM lipid asymmetry, ATP-binding protein" - ], - "id": "CDS_3140", - "location": [ - [ - "NC_000913", - 3340065, - "-", - 810 - ] - ], - "md5": "1cdd4c58354e9744d6ccf5f0ff22f506", - "parent_gene": "", - "protein_md5": "c64901c38cc419fd95efac45ef8a5b3e", - "protein_translation": "MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWILADKKIVAHGSAQALQANPDPRVRQFLDGIADGPVPFRYPAGDYHADLLPGS", - "protein_translation_length": 269, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947730" - ], - [ - "gene_synonym", - "b3196" - ], - [ - "gene_synonym", - "GI:16131086" - ], - [ - "gene_synonym", - "JW3163" - ], - [ - "gene_synonym", - "EcoGene:EG12802" - ], - [ - "gene_synonym", - "yrbG" - ], - [ - "gene_synonym", - "ECK3185" - ], - [ - "gene_synonym", - "NP_417663.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45394" - ], - [ - "gene_synonym", - "ASAP:ABE-0010502" - ] - ], - "dna_sequence": "ATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCATCCCGCCGCTGATCATCGGCATGACGGTGGTCAGTATTGGTACATCGTTACCAGAAGTCATCGTCTCGCTTGCCGCGTCTCTGCACGAACAACGCGATTTAGCCGTTGGTACAGCCCTCGGCTCAAACATTATCAATATATTGCTGATCCTCGGTCTGGCTGCGCTGGTTCGTCCTTTTACCGTCCATTCTGATGTTCTACGCCGTGAATTACCCTTAATGTTGTTGGTCAGCGTGGTGGCCGGTTCCGTACTCTATGACGGACAACTTAGTCGCAGCGATGGTATCTTTCTCCTCTTTCTGGCTGTGCTATGGCTGCTGTTCATTGTTAAACTTGCACGTCAGGCTGAACGTCAGGGGACTGACAGCCTGACCAGAGAGCAGCTTGCAGAGCTGCCGCGTGACGGCGGATTGCCCGTCGCGTTTTTATGGCTCGGCATTGCGCTTATCATCATGCCAGTGGCCACGCGGATGGTGGTTGATAACGCCACGGTGCTGGCGAATTACTTTGCCATCAGCGAGTTGACGATGGGTCTGACGGCAATTGCTATCGGAACCAGCCTGCCGGAACTGGCAACCGCAATAGCGGGGGTTCGCAAAGGTGAAAACGACATTGCTGTCGGAAATATCATTGGCGCAAACATTTTTAATATTGTCATCGTGTTGGGTTTACCCGCGCTGATAACGCCAGGAGAGATTGATCCACTGGCGTACAGTCGTGACTACAGCGTGATGTTGCTGGTGAGCATTATTTTTGCGTTGCTGTGCTGGCGGCGCTCCCCGCAACCGGGCCGTGGTGTAGGGGTATTATTAACTGGCGGATTTATCGTATGGCTGGCGATGTTGTACTGGTTATCGCCAATACTCGTTGAATAA", - "dna_sequence_length": 978, - "functions": [ - "putative calcium/sodium:proton antiporter" - ], - "id": "CDS_3141", - "location": [ - [ - "NC_000913", - 3340275, - "+", - 978 - ] - ], - "md5": "67b4f9bb85000247eb0c78db4ecca08a", - "parent_gene": "", - "protein_md5": "451703c97611612e1cca3fb94f78bc98", - "protein_translation": "MLLATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTVVSIGTSLPEVIVSLAASLHEQRDLAVGTALGSNIINILLILGLAALVRPFTVHSDVLRRELPLMLLVSVVAGSVLYDGQLSRSDGIFLLFLAVLWLLFIVKLARQAERQGTDSLTREQLAELPRDGGLPVAFLWLGIALIIMPVATRMVVDNATVLANYFAISELTMGLTAIAIGTSLPELATAIAGVRKGENDIAVGNIIGANIFNIVIVLGLPALITPGEIDPLAYSRDYSVMLLVSIIFALLCWRRSPQPGRGVGVLLTGGFIVWLAMLYWLSPILVE", - "protein_translation_length": 325, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45395" - ], - [ - "gene_synonym", - "b3197" - ], - [ - "gene_synonym", - "GI:16131087" - ], - [ - "gene_synonym", - "NP_417664.1" - ], - [ - "gene_synonym", - "GeneID:947734" - ], - [ - "gene_synonym", - "kdsD" - ], - [ - "gene_synonym", - "JW3164" - ], - [ - "gene_synonym", - "yrbH" - ], - [ - "gene_synonym", - "EcoGene:EG12803" - ], - [ - "gene_synonym", - "ECK3186" - ], - [ - "gene_synonym", - "ASAP:ABE-0010504" - ] - ], - "dna_sequence": "ATGTCGCACGTAGAGTTACAACCGGGTTTTGACTTTCAGCAAGCAGGTAAAGAAGTCCTGGCGATTGAACGTGAATGCCTGGCGGAGCTTGATCAATACATCAATCAGAATTTCACGCTTGCCTGTGAAAAGATGTTCTGGTGTAAAGGGAAAGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACACCTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAACTCTGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAATCTGCATCACCGGTCGCCCGGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCCTGTCCGTTAGGGCTGGCACCGACCAGCAGCACCACCGCCACGCTGGTTATGGGCGATGCCCTCGCTGTCGCGCTGTTAAAAGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAACTTCTGCTGCGCGTAAACGATATTATGCATACGGGCGATGAGATCCCGCATGTTAAGAAAACGGCCAGTCTGCGTGACGCGTTGCTGGAAGTTACCCGCAAAAATCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCGTGTCTTCGATATGGGCGTGGATGTTCGTCAGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGTGTGCGCCCTGGCATTCTGGCCGTTGAGGCACTGAACTTAATGCAGTCCCGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTACTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAA", - "dna_sequence_length": 987, - "functions": [ - "D-arabinose 5-phosphate isomerase" - ], - "id": "CDS_3142", - "location": [ - [ - "NC_000913", - 3341266, - "+", - 987 - ] - ], - "md5": "c05c34c5e978a851a466d172a4589c8a", - "parent_gene": "", - "protein_md5": "6f1a50071c3b526adab8384d2f3d4af5", - "protein_translation": "MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLLRAGVV", - "protein_translation_length": 328, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3198" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABZ4" - ], - [ - "gene_synonym", - "EcoGene:EG12804" - ], - [ - "gene_synonym", - "GeneID:947717" - ], - [ - "gene_synonym", - "kdsC" - ], - [ - "gene_synonym", - "JW3165" - ], - [ - "gene_synonym", - "yrbJ" - ], - [ - "gene_synonym", - "yrbI" - ], - [ - "gene_synonym", - "NP_417665.1" - ], - [ - "gene_synonym", - "ECK3187" - ], - [ - "gene_synonym", - "ASAP:ABE-0010506" - ], - [ - "gene_synonym", - "GI:16131088" - ] - ], - "dna_sequence": "ATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAAGAGCTGAAAGCGTTCAATGTTCGTGACGGTTATGGCATTCGTTGTGCGCTCACCTCTGATATTGAAGTCGCTATCATTACCGGGCGAAAGGCTAAACTGGTAGAAGATCGTTGTGCCACATTGGGGATCACTCACTTGTATCAGGGGCAGTCAAACAAACTGATCGCCTTTAGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGA", - "dna_sequence_length": 567, - "functions": [ - "3-deoxy-D-manno-octulosonate 8-phosphate phosphatase" - ], - "id": "CDS_3143", - "location": [ - [ - "NC_000913", - 3342273, - "+", - 567 - ] - ], - "md5": "b96c2c848591770e7834829262e4a25f", - "parent_gene": "", - "protein_md5": "f4baa5ce636807ed5876dbd3f737e4c6", - "protein_translation": "MSKAGASLATCYGPVSADVIAKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKLDEAKGQSI", - "protein_translation_length": 188, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417666.1" - ], - [ - "gene_synonym", - "b3199" - ], - [ - "gene_synonym", - "GeneID:947722" - ], - [ - "gene_synonym", - "ASAP:ABE-0010508" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADV9" - ], - [ - "gene_synonym", - "yrbK" - ], - [ - "gene_synonym", - "JW3166" - ], - [ - "gene_synonym", - "ECK3188" - ], - [ - "gene_synonym", - "EcoGene:EG12806" - ], - [ - "gene_synonym", - "GI:16131089" - ], - [ - "gene_synonym", - "lptC" - ] - ], - "dna_sequence": "ATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCGGTTCTGGTGATGATCGGCATTAATATGGCCGAAAAAGACGATACCGCCCAGGTGGTCGTCAACAACAATGATCCCACCTATAAAAGCGAGCATACGGACACGCTCGTCTATAACCCAGAAGGGGCACTAAGCTATCGATTGATTGCTCAACACGTTGAATATTATTCCGATCAGGCCGTTTCGTGGTTTACGCAGCCGGTACTTACCACGTTTGATAAGGATAAAATCCCGACATGGTCCGTAAAAGCAGATAAAGCCAAGCTGACCAATGACCGGATGCTCTATTTATATGGACACGTTGAAGTCAACGCACTTGTGCCAGACTCTCAACTTCGCAGAATCACGACGGATAACGCGCAGATCAATCTGGTGACGCAGGATGTTACCTCTGAAGACCTCGTCACGTTATACGGAACAACATTTAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTGAAAAGGTTAGAACATCCTATGAAATTCAAAACAAACAAACTCAGCCTTAA", - "dna_sequence_length": 576, - "functions": [ - "periplasmic membrane-anchored LPS-binding protein", - "LPS export protein" - ], - "id": "CDS_3144", - "location": [ - [ - "NC_000913", - 3342836, - "+", - 576 - ] - ], - "md5": "6e6513915def6d56b81a5dc4ce8f88ee", - "parent_gene": "", - "protein_md5": "e7b335ee1a6eca37cc7ce70d47aeab74", - "protein_translation": "MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKSEHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAKLTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRTSYEIQNKQTQP", - "protein_translation_length": 191, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947920" - ], - [ - "gene_synonym", - "NP_417667.1" - ], - [ - "gene_synonym", - "yhbN" - ], - [ - "gene_synonym", - "b3200" - ], - [ - "gene_synonym", - "GI:16131090" - ], - [ - "gene_synonym", - "ECK3189" - ], - [ - "gene_synonym", - "JW3167" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADV1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010510" - ], - [ - "gene_synonym", - "lptA" - ], - [ - "gene_synonym", - "EcoGene:EG12618" - ] - ], - "dna_sequence": "ATGAAATTCAAAACAAACAAACTCAGCCTTAATCTTGTGCTTGCCAGCTCACTTCTGGCCGCCAGCATTCCGGCATTTGCCGTAACCGGAGACACTGATCAGCCGATCCACATTGAATCGGACCAGCAATCTCTTGATATGCAAGGCAACGTGGTTACCTTTACCGGTAATGTCATCGTCACCCAGGGCACCATCAAAATTAATGCCGACAAAGTGGTCGTTACCCGTCCGGGCGGCGAACAAGGTAAAGAAGTGATTGACGGCTACGGTAAACCGGCAACGTTCTACCAGATGCAGGACAACGGTAAACCCGTTGAAGGTCACGCTTCCCAGATGCACTACGAACTGGCAAAAGATTTTGTCGTTCTGACGGGTAATGCTTATCTGCAGCAGGTCGATAGCAACATTAAGGGCGATAAGATCACTTACCTGGTGAAAGAGCAGAAAATGCAGGCTTTCAGCGACAAAGGCAAGCGCGTAACAACCGTTCTGGTGCCGTCGCAGCTGCAGGACAAAAACAACAAAGGCCAGACCCCGGCACAGAAGAAGGGTAATTAA", - "dna_sequence_length": 558, - "functions": [ - "lipopolysaccharide export ABC transporter periplasmic binding protein", - "Lipid A binding protein", - "LPS export and assembly protein" - ], - "id": "CDS_3145", - "location": [ - [ - "NC_000913", - 3343380, - "+", - 558 - ] - ], - "md5": "6dc11a40bb909355adaf02d8dc6e57bf", - "parent_gene": "", - "protein_md5": "9e16eff5a04c7b0ce378fdc814bd2127", - "protein_translation": "MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQSLDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNGKPVEGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRVTTVLVPSQLQDKNNKGQTPAQKKGN", - "protein_translation_length": 185, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yhbG" - ], - [ - "gene_synonym", - "GeneID:947725" - ], - [ - "gene_synonym", - "NP_417668.1" - ], - [ - "gene_synonym", - "b3201" - ], - [ - "gene_synonym", - "GI:16131091" - ], - [ - "gene_synonym", - "ASAP:ABE-0010512" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9V1" - ], - [ - "gene_synonym", - "JW3168" - ], - [ - "gene_synonym", - "EcoGene:EG11680" - ], - [ - "gene_synonym", - "lptB" - ], - [ - "gene_synonym", - "ECK3190" - ] - ], - "dna_sequence": "ATGGCAACATTAACTGCAAAGAACCTTGCAAAAGCCTATAAAGGCCGTCGCGTGGTAGAAGACGTCAGCCTGACCGTCAACTCCGGGGAAATTGTCGGTCTGCTGGGGCCAAACGGTGCCGGTAAGACCACCACTTTCTACATGGTTGTAGGCATTGTGCCGCGCGATGCGGGCAACATCATTATTGATGATGACGATATCAGTCTGCTGCCTCTGCATGCACGCGCGCGCCGCGGTATCGGCTATCTGCCACAGGAAGCCTCCATTTTCCGTCGCCTCAGCGTTTACGATAACCTGATGGCGGTACTGCAAATTCGTGACGACTTGTCTGCTGAACAACGTGAAGACCGCGCGAACGAGCTGATGGAAGAGTTTCACATTGAGCACCTGCGTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGCCCACGGCACGCCTACAGAAATCTTACAAGACGAACACGTTAAGCGTGTATACCTTGGGGAAGACTTCAGACTCTGA", - "dna_sequence_length": 726, - "functions": [ - "lipopolysaccharide export ABC transporter ATPase" - ], - "id": "CDS_3146", - "location": [ - [ - "NC_000913", - 3343944, - "+", - 726 - ] - ], - "md5": "fc9e8123db886ef89678d4c4bd24e216", - "parent_gene": "", - "protein_md5": "5b94fca7e3e7cf91dbf3e34e22a4c66b", - "protein_translation": "MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVYLGEDFRL", - "protein_translation_length": 241, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417669.1" - ], - [ - "gene_synonym", - "EcoGene:EG10898" - ], - [ - "gene_synonym", - "glnF" - ], - [ - "gene_synonym", - "rpoN" - ], - [ - "gene_synonym", - "GeneID:947714" - ], - [ - "gene_synonym", - "b3202" - ], - [ - "gene_synonym", - "GI:16131092" - ], - [ - "gene_synonym", - "JW3169" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24255" - ], - [ - "gene_synonym", - "ntrA" - ], - [ - "gene_synonym", - "ECK3191" - ], - [ - "gene_synonym", - "ASAP:ABE-0010514" - ] - ], - "dna_sequence": "ATGAAGCAAGGTTTGCAACTCAGGCTTAGCCAACAACTGGCGATGACGCCACAGCTCCAACAGGCAATTCGTCTGTTGCAGTTGTCGACGCTGGAACTTCAGCAGGAGCTACAGCAGGCGCTGGAGAGTAATCCGCTGCTTGAGCAAATCGACACTCATGAAGAAATCGACACCCGCGAAACGCAAGACAGTGAAACGCTGGACACCGCCGACGCGCTCGAACAAAAAGAGATGCCGGAAGAGCTGCCGCTCGATGCCAGTTGGGACACCATTTACACCGCTGGTACACCATCCGGCACCAGCGGTGACTACATTGACGACGAGCTGCCGGTCTACCAGGGCGAAACGACGCAGACCTTGCAGGATTACCTGATGTGGCAGGTTGAGCTGACACCGTTTTCCGACACTGACCGCGCTATTGCTACCTCTATCGTCGATGCCGTTGATGAAACCGGTTATCTGACTGTCCCGCTGGAAGATATTCTCGAAAGTATAGGCGATGAAGAGATCGACATCGACGAAGTTGAAGCCGTCCTTAAGCGGATCCAACGGTTTGATCCGGTCGGTGTGGCGGCAAAAGATCTGCGTGACTGTCTGCTGATCCAACTCTCCCAATTCGATAAGACCACGCCGTGGCTGGAAGAGGCCAGACTGATCATTAGCGATCATCTCGATCTGTTAGCCAATCACGACTTCCGCACTTTAATGCGCGTCACGCGTCTGAAAGAAGATGTGCTGAAAGAAGCCGTCAATCTGATCCAGTCGCTCGATCCGCGCCCCGGGCAGTCGATCCAGACTGGCGAACCTGAGTATGTCATTCCAGATGTGCTGGTGCGTAAGCATAACGGTCACTGGACGGTAGAACTCAACAGTGACAGCATTCCGCGTCTGCAAATCAACCAGCACTACGCCTCGATGTGCAATAACGCGCGCAACGATGGTGACAGCCAGTTTATCCGCAGCAATCTGCAGGATGCCAAATGGTTGATCAAGAGTCTGGAAAGCCGTAACGATACGCTACTGCGCGTGAGTCGCTGTATCGTTGAACAGCAGCAAGCCTTCTTTGAGCAAGGTGAAGAATATATGAAACCGATGGTACTGGCCGATATCGCCCAGGCTGTCGAAATGCATGAATCGACGATATCTCGCGTGACCACGCAAAAATACCTGCATAGTCCACGAGGCATTTTTGAACTGAAGTATTTCTTTTCCAGTCACGTCAATACCGAGGGCGGCGGCGAAGCTTCCTCCACGGCGATTCGTGCGCTGGTGAAGAAATTAATCGCGGCGGAAAACCCAGCGAAACCGTTGAGCGACAGCAAGTTAACCTCTTTGCTGTCGGAACAAGGTATCATGGTGGCACGCCGCACTGTTGCGAAGTACCGAGAGTCTTTATCCATTCCGCCGTCAAACCAGCGTAAACAACTCGTTTGA", 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"gene_synonym", - "yhbH" - ], - [ - "gene_synonym", - "ECK3192" - ], - [ - "gene_synonym", - "JW3170" - ], - [ - "gene_synonym", - "b3203" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFX0" - ], - [ - "gene_synonym", - "GI:16131093" - ], - [ - "gene_synonym", - "EcoGene:EG11681" - ], - [ - "gene_synonym", - "hpf" - ], - [ - "gene_synonym", - "NP_417670.1" - ] - ], - "dna_sequence": "ATGCAGCTCAACATTACCGGAAATAACGTCGAGATCACCGAGGCACTGCGCGAATTTGTTACAGCCAAATTTGCCAAACTTGAGCAATATTTTGACCGAATCAACCAGGTCTATGTTGTTCTGAAAGTGGAGAAAGTCACCCACACCTCAGATGCAACACTGCATGTAAACGGTGGTGAAATTCATGCCAGCGCGGAAGGTCAGGACATGTACGCTGCCATTGATGGCTTAATTGATAAGCTGGCACGCCAGTTGACCAAACATAAAGATAAACTGAAACAACACTAA", - "dna_sequence_length": 288, - "functions": [ - "ribosome hibernation promoting factor HPF", - "stabilizes 100S dimers" - ], - "id": "CDS_3148", - "location": [ - [ - "NC_000913", - 3346173, - "+", - 288 - ] - ], - "md5": "60f0eb3314ce47ced67405b5a7aa8733", - "parent_gene": "", - "protein_md5": "261ff6da90a7a3f692be0c00dde3dae7", - "protein_translation": "MQLNITGNNVEITEALREFVTAKFAKLEQYFDRINQVYVVLKVEKVTHTSDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH", - "protein_translation_length": 95, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69829" - ], - [ - "gene_synonym", - "rpoP" - ], - [ - "gene_synonym", - "yhbI" - ], - [ - "gene_synonym", - "GeneID:947721" - ], - [ - "gene_synonym", - "GI:16131094" - ], - [ - "gene_synonym", - "JW3171" - ], - [ - "gene_synonym", - "b3204" - ], - [ - "gene_synonym", - "ptsN" - ], - [ - "gene_synonym", - "NP_417671.1" - ], - [ - "gene_synonym", - "ECK3193" - ], - [ - "gene_synonym", - "ASAP:ABE-0010520" - ], - [ - "gene_synonym", - "EcoGene:EG11682" - ] - ], - "dna_sequence": "ATGACAAATAATGATACAACTCTACAGCTTAGCAGTGTTCTTAACAGGGAATGTACGCGAAGCCGCGTCCACTGTCAGAGCAAAAAACGCGCCCTGGAAATCATCAGCGAGCTGGCGGCGAAACAACTTAGCCTGCCGCCTCAGGTGGTTTTTGAAGCTATCCTGACGCGGGAAAAAATGGGCAGTACCGGTATCGGCAATGGTATTGCCATTCCGCATGGCAAACTGGAAGAAGATACTCTGCGCGCCGTTGGCGTTTTCGTTCAGCTCGAAACGCCTATAGCTTTCGATGCCATCGACAACCAACCGGTGGACTTACTTTTTGCCCTGCTGGTGCCGGCAGACCAAACTAAAACGCACCTGCATACTCTGTCGCTGGTGGCGAAACGTCTGGCGGACAAAACCATCTGCCGCCGTTTACGCGCAGCCCAGAGCGATGAAGAGCTGTATCAAATCATTACGGATACCGAAGGTACTCCGGATGAAGCGTAG", - "dna_sequence_length": 492, - "functions": [ - "sugar-specific enzyme IIA component of PTS" - ], - "id": "CDS_3149", - "location": [ - [ - "NC_000913", - 3346578, - "+", - 492 - ] - ], - "md5": "9728da9510651fa3c9f8c1829d15c3a3", - "parent_gene": "", - "protein_md5": "f8eabdac91826090bfcf6a2066a5dd80", - "protein_translation": "MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLSLPPQVVFEAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQPVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTEGTPDEA", - "protein_translation_length": 163, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rapZ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A894" - ], - [ - "gene_synonym", - "GeneID:947727" - ], - [ - "gene_synonym", - "NP_417672.1" - ], - [ - "gene_synonym", - "EcoGene:EG12146" - ], - [ - "gene_synonym", - "yhbJ" - ], - [ - "gene_synonym", - "JW3172" - ], - [ - "gene_synonym", - "GI:16131095" - ], - [ - "gene_synonym", - "b3205" - ], - [ - "gene_synonym", - "ECK3194" - ], - [ - "gene_synonym", - "ASAP:ABE-0010522" - ] - ], - "dna_sequence": "ATGGTACTGATGATCGTCAGCGGACGTTCAGGTTCAGGTAAATCTGTCGCCCTGCGTGCGCTGGAAGATATGGGTTTTTACTGCGTGGATAACCTTCCCGTAGTGTTGTTACCCGATCTGGCTCGAACCCTGGCCGATCGCGAGATTTCTGCCGCCGTCAGCATTGATGTTCGTAATATGCCGGAGTCACCAGAAATATTCGAACAGGCGATGAGTAACCTGCCTGACGCTTTCTCACCGCAACTCCTGTTCCTGGATGCCGACCGTAATACCTTAATTCGTCGTTACAGTGACACGCGCCGACTGCATCCGCTTTCCAGCAAAAACCTGTCGCTGGAAAGTGCTATCGACAAAGAAAGCGATTTGCTGGAGCCTCTGCGTTCGCGAGCGGATCTGATTGTCGATACCTCAGAAATGTCCGTTCACGAGCTGGCTGAAATGCTGCGTACCCGTCTGCTGGGTAAACGTGAACGCGAACTGACCATGGTCTTTGAGTCTTTCGGCTTCAAACACGGTATCCCTATCGATGCAGATTACGTCTTTGACGTGCGCTTCTTGCCGAACCCGCACTGGGATCCGAAACTGCGTCCAATGACAGGTCTTGATAAACCTGTCGCCGCGTTCCTCGACCGCCACACAGAAGTACACAATTTTATCTACCAGACGCGAAGCTATCTTGAGCTATGGTTACCTATGCTGGAAACCAACAACCGTAGCTACTTGACGGTCGCCATTGGTTGTACCGGCGGGAAGCACCGTTCGGTGTATATTGCAGAGCAACTGGCAGACTACTTCCGCTCGCGCGGTAAAAACGTCCAGTCACGCCATCGTACGCTGGAAAAACGTAAACCATGA", - "dna_sequence_length": 855, - "functions": [ - "adaptor protein for GlmZ/GlmY sRNA decay, glucosamine-6-phosphate-regulated", - "NTPase" - 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"ECK3195" - ], - [ - "gene_synonym", - "GeneID:947914" - ], - [ - "gene_synonym", - "ASAP:ABE-0010524" - ], - [ - "gene_synonym", - "npr" - ] - ], - "dna_sequence": "ATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCTGGGCATGCATGCCCGGCCTGCAATGAAGCTGTTTGAATTAATGCAGGGTTTTGACGCTGAAGTGCTCTTACGTAATGACGAAGGCACCGAGGCTGAAGCCAACAGCGTTATTGCGCTGCTGATGTTGGATTCTGCCAAAGGACGGCAGATTGAAGTTGAAGCGACCGGTCCACAGGAAGAGGAAGCACTGGCCGCCGTTATCGCCCTCTTTAATTCTGGTTTTGATGAAGATTAA", - "dna_sequence_length": 273, - "functions": [ - "phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr)" - ], - "id": "CDS_3151", - "location": [ - [ - "NC_000913", - 3347966, - "+", - 273 - ] - ], - "md5": "4a8f22d932946ab25790121594d2b2ae", - "parent_gene": "", - "protein_md5": "f957fc3f45621e04f1c53152aea9a048", - "protein_translation": "MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEAEANSVIALLMLDSAKGRQIEVEATGPQEEEALAAVIALFNSGFDED", - "protein_translation_length": 90, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010528" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64610" - ], - [ - "gene_synonym", - "GI:16131097" - ], - [ - "gene_synonym", - "NP_417674.1" - ], - [ - "gene_synonym", - "yrbL" - ], - [ - "gene_synonym", - "JW3174" - ], - [ - "gene_synonym", - "b3207" - ], - [ - "gene_synonym", - "ECK3196" - ], - [ - "gene_synonym", - "EcoGene:EG12807" - ], - [ - "gene_synonym", - "GeneID:947910" - ] - ], - "dna_sequence": "ATGATTCGCTTATCTGAACAAAGTCCCCTGGGCACCGGAAGACATCGGAAATGTTATGCGCATCCGGAAGATGCCCAACGCTGTATCAAGATTGTCTACCATCGTGGCGATGGTGGCGATAAAGAGATCCGCCGTGAGTTAAAGTACTACGCGCATCTTGGTCGCCGGTTAAAAGACTGGAGTGGAATACCGCGCTATCACGGTACCGTTGAGACGGATTGCGGAACCGGTTATGTCTACGATGTGATTGCAGATTTTGACGGCAAGCCTTCCATTACGCTGACCGAATTTGCTGAACAATGCCGTTACGAAGAAGACATTGCACAACTGCGCCAGCTACTGAAACAGCTGAAGCGTTATTTGCAGGATAACCGTATCGTGACGATGTCGCTGAAGCCGCAGAATATCCTCTGTCACCGCATCAGTGAGTCAGAGGTTATCCCGGTCGTCTGCGACAACATTGGTGAAAGCACATTGATTCCACTGGCGACCTGGTCGAAGTGGTGTTGTCTGCGTAAGCAAGAGCGGTTATGGAAACGATTTATCGCCCAACCGGCGCTGGCTATTGCCCTGCAGAAAGATCTGCAACCTCGTGAGAGCAAAACGCTGGCCCTCACTTCGCGCGAAGCTTAA", - "dna_sequence_length": 633, - "functions": [ - "Mg(2+)-starvation-stimulated protein" - ], - "id": "CDS_3152", - "location": [ - [ - "NC_000913", - 3348452, - "+", - 633 - ] - ], - "md5": "cad854afc87e6bf90698db722767958d", - "parent_gene": "", - "protein_md5": "6aa8c3f6bc3d4c9b66bfec303e76f0f9", - "protein_translation": "MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLGRRLKDWSGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCRYEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHRISESEVIPVVCDNIGESTLIPLATWSKWCCLRKQERLWKRFIAQPALAIALQKDLQPRESKTLALTSREA", - "protein_translation_length": 210, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010530" - ], - [ - "gene_synonym", - "GeneID:947728" - ], - [ - "gene_synonym", - "JW3175" - ], - [ - "gene_synonym", - "EcoGene:EG12808" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46022" - ], - [ - "gene_synonym", - "ECK3197" - ], - [ - "gene_synonym", - "yrbM" - ], - [ - "gene_synonym", - "mgt" - ], - [ - "gene_synonym", - "b3208" - ], - [ - "gene_synonym", - "NP_417675.1" - ], - [ - "gene_synonym", - "GI:16131098" - ], - [ - "gene_synonym", - "mtgA" - ] - ], - "dna_sequence": "ATGAGTAAAAGCCGCTTAACGGTGTTTAGTTTCGTTCGCCGTTTTCTTTTGCGGTTAATGGTTGTCCTCGCCGTTTTCTGGGGCGGGGGCATCGCGTTGTTTAGCGTTGCGCCTGTTCCCTTCTCAGCGGTAATGGTCGAGCGACAGGTCAGCGCCTGGCTGCATGGCAATTTTCGTTACGTGGCACATTCTGACTGGGTCAGTATGGATCAAATCTCGCCGTGGATGGGACTGGCGGTGATTGCCGCAGAAGATCAGAAATTTCCTGAGCACTGGGGCTTTGATGTCGCTTCCATTGAGAAAGCCCTGGCGCACAACGAGCGCAATGAAAACCGTATTCGCGGTGCTTCAACGATTTCTCAACAGACAGCCAAAAATCTCTTTTTATGGGATGGGCGTAGCTGGGTTCGAAAAGGGCTGGAAGCCGGATTAACGCTGGGGATAGAAACGGTCTGGAGCAAAAAGCGTATCCTGACGGTTTACCTGAATATCGCCGAATTTGGCGACGGTGTGTTTGGCGTCGAAGCTGCGGCACAACGTTATTTCCACAAACCCGCGAGCAAACTTACCCGGTCGGAAGCTGCATTACTGGCAGCTGTATTACCTAATCCACTTCGTTTCAAAGTCTCCTCGCCATCGGGCTACGTGCGTAGCCGTCAGGCGTGGATTTTACGGCAGATGTATCAGTTAGGCGGTGAGCCGTTTATGCAACAACACCAGCTGGATTAA", - "dna_sequence_length": 729, - "functions": [ - "biosynthetic peptidoglycan transglycosylase" - ], - "id": "CDS_3153", - "location": [ - [ - "NC_000913", - 3349809, - "-", - 729 - ] - ], - "md5": "df4caeb59347982a0483242d0ddc4e6a", - "parent_gene": "", - "protein_md5": "58e1f9af0b98ce4caf583eb75bababe8", - "protein_translation": "MSKSRLTVFSFVRRFLLRLMVVLAVFWGGGIALFSVAPVPFSAVMVERQVSAWLHGNFRYVAHSDWVSMDQISPWMGLAVIAAEDQKFPEHWGFDVASIEKALAHNERNENRIRGASTISQQTAKNLFLWDGRSWVRKGLEAGLTLGIETVWSKKRILTVYLNIAEFGDGVFGVEAAAQRYFHKPASKLTRSEAALLAAVLPNPLRFKVSSPSGYVRSRQAWILRQMYQLGGEPFMQQHQLD", - "protein_translation_length": 242, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417676.2" - ], - [ - "gene_synonym", - "elbB" - ], - [ - "gene_synonym", - "yhbL" - ], - [ - "gene_synonym", - "elb2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABU5" - ], - [ - "gene_synonym", - "ASAP:ABE-0010532" - ], - [ - "gene_synonym", - "JW3176" - ], - [ - "gene_synonym", - "ECK3198" - ], - [ - "gene_synonym", - "b3209" - ], - [ - "gene_synonym", - "GeneID:947903" - ], - [ - "gene_synonym", - "yzzB" - ], - [ - "gene_synonym", - "GI:90111557" - ], - [ - "gene_synonym", - "EcoGene:EG11383" - ] - ], - "dna_sequence": "ATGAAGAAAATTGGCGTAATTCTGAGCGGATGCGGCGTCTATGACGGTTCTGAAATTCATGAAGCGGTGTTGACGTTGTTAGCTATTTCACGCAGCGGTGCGCAGGCGGTCTGCTTTGCACCGGATAAGCAGCAGGTTGATGTTATCAACCATTTAACTGGCGAAGCGATGACGGAAACGCGCAATGTGCTGATTGAAGCGGCACGAATAACGCGCGGTGAAATCCGTCCTCTGGCCCAGGCCGATGCCGCTGAACTGGATGCGTTGATTGTGCCGGGGGGGTTTGGCGCGGCGAAGAATTTAAGCAATTTTGCCAGTCTTGGTAGCGAATGCACCGTTGACCGTGAATTAAAGGCGCTGGCACAAGCGATGCATCAGGCCGGAAAACCGCTTGGTTTTATGTGTATTGCCCCGGCGATGCTGCCGAAAATTTTCGATTTCCCGCTGCGTTTGACCATCGGTACTGATATCGATACCGCAGAAGTGCTGGAAGAGATGGGCGCGGAGCATGTGCCGTGTCCTGTCGATGATATCGTGGTTGATGAAGACAATAAGATTGTCACCACCCCAGCATATATGCTGGCGCAGAACATTGCAGAAGCGGCGAGCGGCATTGATAAGCTGGTTTCCCGCGTGCTGGTTCTGGCTGAATGA", - "dna_sequence_length": 654, - "functions": [ - "isoprenoid biosynthesis protein with amidotransferase-like domain" - ], - "id": "CDS_3154", - "location": [ - [ - "NC_000913", - 3350459, - "-", - 654 - ] - ], - "md5": "e640d70ed592e8e10bb96b3267303a64", - "parent_gene": "", - "protein_md5": "0b0d87592956d7cb8c345679bc86a9ec", - "protein_translation": "MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKIFDFPLRLTIGTDIDTAEVLEEMGAEHVPCPVDDIVVDEDNKIVTTPAYMLAQNIAEAASGIDKLVSRVLVLAE", - "protein_translation_length": 217, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010537" - ], - [ - "gene_synonym", - "GeneID:947887" - ], - [ - "gene_synonym", - "ECK3200" - ], - [ - "gene_synonym", - "GI:49176326" - ], - [ - "gene_synonym", - "arcB" - ], - [ - "gene_synonym", - "b3210" - ], - [ - "gene_synonym", - "JW5536" - ], - [ - "gene_synonym", - "EcoGene:EG10062" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEC3" - ], - [ - "gene_synonym", - "YP_026207.1" - ] - ], - "dna_sequence": "ATGAAGCAAATTCGTCTGCTGGCGCAGTATTATGTTGACCTGATGATGAAGTTAGGTCTGGTGCGCTTCTCAATGTTGCTGGCGCTGGCCCTCGTCGTTCTTGCCATTGTGGTACAAATGGCGGTAACCATGGTGCTGCATGGTCAGGTCGAAAGCATTGATGTTATTCGTTCTATCTTCTTTGGTTTGCTGATTACGCCGTGGGCGGTCTACTTTCTATCGGTGGTCGTCGAGCAACTGGAGGAGTCACGACAACGTCTGTCACGGCTGGTGCAAAAACTGGAGGAGATGCGCGAGCGCGATTTGAGCCTCAACGTTCAGTTAAAAGATAATATTGCCCAGCTAAATCAGGAAATTGCCGTTCGTGAAAAAGCGGAAGCAGAACTGCAGGAAACCTTCGGCCAACTGAAAATTGAAATCAAAGAGCGCGAAGAGACACAAATTCAGCTCGAGCAGCAATCCTCATTCTTACGTTCCTTCCTTGATGCTTCACCCGACCTGGTTTTTTATCGTAACGAAGATAAAGAGTTTTCCGGCTGTAACCGCGCGATGGAGCTGCTGACCGGAAAAAGCGAAAAACAACTGGTTCACCTGAAACCTGCTGATGTTTACTCACCGGAAGCCGCCGCAAAAGTCATTGAAACCGATGAAAAAGTGTTCCGTCATAATGTGTCACTGACCTATGAACAGTGGCTGGATTACCCGGACGGGCGCAAAGCCTGCTTTGAAATCCGTAAAGTGCCGTACTACGACCGCGTGGGTAAACGTCACGGTTTGATGGGCTTTGGTCGCGACATTACCGAGCGTAAGCGGTATCAGGATGCGCTTGAACGGGCCAGCCGCGACAAAACGACGTTTATCTCCACCATCAGTCACGAATTGCGTACACCGCTGAACGGTATCGTCGGTCTGAGCCGCATTCTGCTGGATACCGAACTCACCGCCGAGCAGGAAAAATATCTCAAGACCATCCATGTTTCGGCCGTCACGCTGGGGAATATCTTTAACGATATTATCGACATGGATAAGATGGAACGGCGCAAGGTCCAGCTTGATAATCAACCGGTTGATTTCACCAGCTTCCTTGCCGATCTGGAAAATCTCTCCGCATTGCAGGCGCAACAAAAAGGATTGCGCTTTAACCTGGAGCCGACGCTGCCATTACCGCATCAGGTCATTACCGACGGGACGCGTTTACGGCAGATCCTGTGGAACCTCATCAGTAACGCCGTCAAATTCACCCAGCAAGGCCAGGTTACCGTGCGCGTGCGCTACGATGAAGGCGATATGCTGCATTTTGAAGTGGAAGACTCTGGTATCGGCATTCCGCAGGATGAGCTGGATAAAATTTTCGCCATGTATTACCAGGTGAAAGACAGTCATGGCGGTAAACCTGCCACCGGCACCGGTATTGGTCTGGCCGTTTCTCGTCGTCTGGCGAAAAATATGGGCGGCGATATTACGGTTACCAGCGAACAGGGCAAAGGTTCAACCTTTACGTTGACGATCCACGCACCGTCGGTAGCAGAAGAGGTCGATGATGCGTTTGATGAAGACGATATGCCTTTACCGGCGCTGAATGTGCTGCTGGTGGAAGACATTGAACTGAACGTGATTGTTGCGCGTTCTGTGCTGGAAAAATTAGGTAACAGCGTTGATGTCGCCATGACCGGCAAGGCGGCGCTGGAGATGTTTAAACCGGGCGAATACGACCTGGTGTTGCTGGATATTCAGTTGCCAGATATGACCGGGCTGGATATCTCTCGTGAACTGACGAAACGTTATCCGCGCGAGGATTTACCGCCGCTGGTGGCCTTAACCGCTAACGTGCTGAAAGACAAACAAGAGTACCTCAATGCTGGAATGGATGATGTGCTGAGTAAGCCGCTTTCTGTTCCGGCGCTAACCGCGATGATCAAGAAATTCTGGGATACCCAGGATGATGAGGAGAGTACGGTGACGACAGAAGAGAACAGTAAATCAGAAGCATTGCTCGATATTCCCATGCTGGAACAGTATCTCGAACTTGTAGGACCGAAGCTGATCACCGACGGGTTAGCGGTGTTTGAGAAGATGATGCCGGGCTATGTCAGCGTGCTGGAGTCGAATCTGACGGCGCAGGATAAAAAAGGCATTGTTGAGGAAGGACATAAAATTAAAGGTGCGGCGGGGTCAGTGGGGTTACGCCATCTGCAACAGCTGGGTCAGCAAATTCAGTCTCCTGACCTTCCGGCCTGGGAAGATAACGTCGGTGAATGGATTGAAGAGATGAAAGAAGAGTGGCGTCACGACGTAGAAGTGCTGAAAGCGTGGGTGGCAAAAGCCACTAAAAAATGA", - "dna_sequence_length": 2337, - "functions": [ - "aerobic respiration control sensor histidine protein kinase, cognate to two-component response regulators ArcA and RssB" - ], - "id": "CDS_3155", - "location": [ - [ - "NC_000913", - 3353025, - "-", - 2337 - ] - ], - "md5": "580de0e851745add42432604aa17c9f8", - "parent_gene": "", - "protein_md5": "194ab80cc2a4c255030c3792403ba6b2", - "protein_translation": "MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTMVLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDLSLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSFLDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEKVFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDGTRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSVAEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDDVLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSKSEALLDIPMLEQYLELVGPKLITDGLAVFEKMMPGYVSVLESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQSPDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK", - "protein_translation_length": 778, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010540" - ], - [ - "gene_synonym", - "NP_417678.1" - ], - [ - "gene_synonym", - "ECK3201" - ], - [ - "gene_synonym", - "GeneID:947733" - ], - [ - "gene_synonym", - "EcoGene:EG12809" - ], - [ - "gene_synonym", - "b3211" - ], - [ - "gene_synonym", - "GI:16131101" - ], - [ - "gene_synonym", - "yhcC" - ], - [ - "gene_synonym", - "JW3178" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADW6" - ] - ], - "dna_sequence": "ATGCAGTTACAGAAATTAGTCAATATGTTTGGTGGTGATCTCACCCGTCGTTATGGGCAAAAGGTGCATAAGCTGACGCTGCACGGCGGTTTTAGCTGCCCTAACCGTGACGGTACCATCGGGCGTGGTGGCTGCACATTCTGTAATGTTGCCTCGTTTGCCGATGAAGCGCAGCAGCATCGTTCCATTGCCGAGCAACTGGCGCACCAGGCGAATTTAGTTAACCGCGCTAAACGCTATCTGGCCTACTTTCAGGCGTATACCAGCACCTTTGCGGAAGTTCAGGTGCTGCGTTCTATGTATCAGCAGGCGGTGAGCCAGGCCAATATTGTCGGTTTGTGTGTGGGTACCCGCCCGGACTGCGTGCCGGATGCGGTGCTGGATCTGCTTTGCGAATATAAGGACCAGGGTTACGAAGTGTGGCTGGAGCTGGGGCTACAAACCGCCCACGACAAAACACTGCATCGCATCAACCGCGGCCATGATTTTGCCTGTTATCAGCGTACAACCCAGCTGGCACGTCAGCGCGGGCTGAAGGTGTGTTCCCACTTAATTGTCGGCCTGCCTGGCGAAGGGCAGGCTGAATGTTTGCAAACGCTGGAGCGAGTGGTTGAAACCGGCGTGGACGGCATAAAGCTGCATCCGCTGCATATTGTGAAAGGCAGCATTATGGCGAAAGCCTGGGAAGCGGGGCGTTTGAACGGTATTGAACTGGAGGATTACACGCTCACTGCCGGAGAAATGATTCGCCATACGCCACCGGAAGTGATCTACCACCGCATTTCCGCCAGCGCCCGTCGCCCGACGCTGCTTGCTCCGCTGTGGTGCGAAAATCGATGGACGGGAATGGTCGAGCTGGATCGCTATCTGAATGAACATGGCGTACAGGGATCGGCGCTGGGACGTCCGTGGCTACCTCCAACGGAGTAG", - "dna_sequence_length": 930, - "functions": [ - "putative Fe-S oxidoreductase, Radical SAM superfamily protein" - ], - "id": "CDS_3156", - "location": [ - [ - "NC_000913", - 3354050, - "-", - 930 - ] - ], - "md5": "e287e19d6d711d3f93f4bdadd400f14b", - "parent_gene": "", - "protein_md5": "386e027e457f0b95276ef25a571eff4e", - "protein_translation": "MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNEHGVQGSALGRPWLPPTE", - "protein_translation_length": 309, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417679.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0010545" - ], - [ - "gene_synonym", - "gltB" - ], - [ - "gene_synonym", - "GI:308209621" - ], - [ - "gene_synonym", - "aspB" - ], - [ - "gene_synonym", - "GeneID:947724" - ], - [ - "gene_synonym", - "EcoGene:EG10403" - ], - [ - "gene_synonym", - "ECK3202" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09831" - ], - [ - "gene_synonym", - "b3212" - ], - [ - "gene_synonym", - "JW3179" - ], - [ - "gene_synonym", - "ossB" - ], - [ - "gene_synonym", - "psiQ" - ] - ], - "dna_sequence": "ATGTTGTACGATAAATCCCTTGAGAGGGATAACTGTGGTTTCGGCCTGATCGCCCACATAGAAGGCGAACCTAGCCACAAGGTAGTGCGTACTGCAATACACGCACTGGCCCGCATGCAGCACCGTGGCGCGATTCTCGCCGATGGTAAAACCGGCGACGGTTGCGGCTTGCTGTTACAAAAACCGGATCGCTTTTTTCGCATCGTTGCGCAGGAGCGCGGCTGGCGTTTAGCAAAAAACTACGCTGTCGGGATGCTCTTCCTGAATAAAGATCCTGAACTCGCCGCTGCCGCACGCCGCATCGTTGAAGAAGAACTGCAACGCGAAACCTTGTCGATTGTGGGCTGGCGTGATGTCCCCACTAACGAAGGCGTGCTGGGTGAAATCGCCCTCTCCTCTCTGCCACGCATTGAGCAAATTTTTGTGAACGCCCCGGCAGGCTGGCGTCCACGCGATATGGAGCGCCGTCTGTTTATCGCCCGCCGCCGCATTGAAAAGCGTCTCGAAGCCGACAAAGACTTCTACGTCTGTAGCCTGTCGAATCTGGTGAACATCTATAAAGGTCTGTGTATGCCGACGGATCTGCCGCGCTTTTATCTGGATCTTGCGGACCTGCGTCTGGAATCGGCCATTTGCCTGTTCCACCAGCGCTTCTCCACTAACACCGTACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGGTAACCGCCAATGGGCGCGTGCGCGTACTTATAAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCCCGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTCGACCGTAACGGTCTGCGTCCGGCGCGCTACGTCATCACCAAAGATAAGCTCATCACCTGCGCCTCTGAAGTCGGTATCTGGGATTACCAGCCTGACGAAGTGGTCGAAAAAGGCCGCGTCGGGCCAGGCGAACTGATGGTTATCGACACCCGCAGTGGGCGTATTCTGCACTCGGCAGAAACCGATGACGATCTGAAAAGCCGCCATCCATATAAAGAGTGGATGGAGAAAAACGTCCGCCGACTGGTACCGTTTGAAGATCTGCCCGATGAAGAAGTGGGTAGCCGCGAACTGGACGACGACACGCTTGCCAGCTACCAGAAACAGTTTAACTACAGCGCGGAAGAGCTGGACTCCGTAATTCGCGTACTGGGCGAAAACGGTCAGGAAGCGGTCGGTTCGATGGGCGATGATACCCCATTCGCCGTGCTCTCCAGTCAGCCGCGCATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCACCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTCCGATTTCAAACAGCTCACGACGATGAAAGAGGAGCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGCCTGCGTTGCGATGCCAACATCATCGTCGAAACCGCCAGCGCCCGCGATCCGCACCACTTCGCCGTGTTGCTGGGCTTCGGCGCGACGGCTATTTATCCATACCTTGCCTATGAAACGCTGGGCCGCCTGGTAGACACCCATGCGATTGCCAAAGATTATCGTACCGTGATGCTCAACTACCGTAACGGCATCAACAAAGGCTTGTACAAAATCATGTCCAAAATGGGCATCTCCACCATCGCCTCTTACCGCTGCTCGAAACTGTTTGAAGCGGTCGGTCTACACGATGATGTAGTGGGCCTGTGCTTCCAGGGGGCGGTCAGCCGCATTGGTGGAGCAAGCTTTGAAGACTTCCAGCAGGATCTGCTGAATCTGTCGAAACGTGCCTGGCTGGCGCGTAAGCCCATCAGCCAGGGCGGTCTGCTGAAATACGTCCACGGCGGCGAATACCACGCCTACAACCCGGACGTGGTGCGCACGCTGCAACAAGCGGTACAAAGCGGCGAGTACAGCGACTATCAGGAATACGCGAAGCTGGTTAATGAGCGTCCGGCAACCACGCTGCGCGATCTGCTGGCAATTACGCCGGGTGAAAACGCGGTCAACATTGCTGATGTTGAACCGGCAAGCGAACTGTTTAAACGCTTTGATACCGCCGCGATGTCTATCGGCGCGTTAAGCCCGGAAGCCCACGAGGCGCTGGCGGAAGCGATGAACAGCATCGGCGGTAATTCGAACTCCGGTGAAGGCGGCGAAGACCCGGCGCGCTACGGCACCAACAAAGTGTCGCGCATCAAGCAGGTGGCTTCCGGTCGCTTTGGGGTTACTCCGGCGTATCTGGTCAATGCCGACGTCATTCAGATTAAAGTCGCCCAGGGCGCGAAGCCAGGCGAAGGCGGTCAGTTGCCGGGTGATAAAGTCACGCCTTACATCGCCAAACTGCGCTATTCGGTGCCCGGAGTGACGCTGATCTCCCCGCCGCCGCACCACGATATCTACTCTATCGAGGACTTAGCGCAGCTCATTTTCGACCTCAAGCAGGTTAACCCGAAAGCGATGATCTCCGTGAAGCTGGTTTCCGAACCGGGAGTAGGCACCATCGCGACTGGCGTGGCAAAAGCTTATGCGGACTTGATCACCATCGCAGGCTATGACGGCGGCACCGGCGCAAGTCCGCTTTCATCGGTGAAATACGCAGGCTGTCCGTGGGAGCTGGGGCTTGTTGAAACCCAGCAGGCGCTGGTTGCTAACGGCTTGCGTCACAAGATCCGTTTGCAGGTCGATGGCGGCCTGAAAACGGGTGTCGATATCATCAAGGCGGCGATTCTCGGCGCAGAAAGCTTCGGCTTCGGCACTGGCCCGATGGTGGCGCTCGGCTGTAAATATCTACGTATTTGCCATCTGAACAACTGCGCAACGGGTGTAGCAACTCAGGATGACAAACTGCGTAAGAACCACTATCACGGCCTGCCATTCAAGGTGACGAATTACTTTGAGTTTATCGCCCGTGAAACCCGCGAGCTGATGGCACAGCTTGGCGTAACACGTCTGGTGGATCTGATTGGTCGCACCGACCTGCTGAAAGAGCTGGACGGTTTCACCGCCAAACAGCAGAAGCTGGCGCTGTCGAAGCTGCTGGAGACTGCCGAACCGCATCCAGGTAAGGCACTCTACTGCACCGAAAACAACCCGCCGTTTGATAACGGCCTGCTGAACGCGCAGTTGCTGCAACAGGCGAAACCGTTTGTCGATGAGCGCCAGAGCAAAACCTTCTGGTTCGATATTCGCAACACCGACCGTTCTGTCGGCGCGTCGCTTTCAGGCTATATCGCCCAGACGCACGGCGATCAGGGGCTGGCAGCCGATCCTATCAAAGCGTACTTCAACGGCACCGCAGGCCAGAGCTTCGGCGTGTGGAACGCGGGCGGCGTGGAACTGTACCTGACCGGTGATGCCAACGACTATGTCGGTAAAGGCATGGCGGGCGGCTTAATCGCCATTCGTCCTCCGGTTGGTTCCGCCTTCCGCAGCCATGAAGCAAGCATTATCGGCAACACCTGCCTGTATGGCGCGACCGGTGGTCGTCTGTATGCCGCAGGCCGCGCGGGTGAACGTTTCGGCGTGCGTAACTCCGGTGCTATCACCGTGGTAGAAGGCATTGGCGACAACGGTTGTGAATATATGACGGGTGGTATCGTCTGCATTCTGGGTAAAACCGGCGTTAACTTCGGTGCGGGCATGACCGGCGGTTTCGCTTACGTTCTCGATGAAAGCGGCGATTTCCGCAAACGCGTTAACCCGGAACTGGTCGAGGTCTTAAGCGTTGACGCTCTGGCGATCCATGAAGAGCATCTGCGTGGTCTTATCACCGAGCATGTGCAGCATACCGGCTCTCAGCGCGGTGAAGAGATTCTGGCGAACTGGTCAACCTTCGCCACTAAATTTGCGCTGGTTAAACCGAAGTCCAGTGATGTAAAAGCACTGCTGGGTCACCGTAGTCGTAGCGCAGCTGAGTTGCGCGTGCAGGCGCAGTAA", - "dna_sequence_length": 4461, - "functions": [ - "glutamate synthase, large subunit" - ], - "id": "CDS_3157", - "location": [ - [ - "NC_000913", - 3354725, - "+", - 4461 - ] - ], - "md5": "48bd98579663fa1bf1c3d08907bb8c13", - "parent_gene": "", - "protein_md5": "8d3ca885fcf8569e84aca6864ab563a1", - "protein_translation": "MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGAILADGKTGDGCGLLLQKPDRFFRIVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIVEEELQRETLSIVGWRDVPTNEGVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIARRRIEKRLEADKDFYVCSLSNLVNIYKGLCMPTDLPRFYLDLADLRLESAICLFHQRFSTNTVPRWPLAQPFRYLAHNGEINTITGNRQWARARTYKFQTPLIPDLHDAAPFVNETGSDSSSMDNMLELLLAGGMDIIRAMRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWDGPAGIVMSDGRFAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVGPGELMVIDTRSGRILHSAETDDDLKSRHPYKEWMEKNVRRLVPFEDLPDEEVGSRELDDDTLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQQFAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLTTMKEEHYRADTLDITFDVTKTTLEATVKELCDKAEKMVRSGTVLLVLSDRNIAKDRLPVPAPMAVGAIQTRLVDQSLRCDANIIVETASARDPHHFAVLLGFGATAIYPYLAYETLGRLVDTHAIAKDYRTVMLNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDVVGLCFQGAVSRIGGASFEDFQQDLLNLSKRAWLARKPISQGGLLKYVHGGEYHAYNPDVVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGENAVNIADVEPASELFKRFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGRFGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHHDIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARETRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHPGKALYCTENNPPFDNGLLNAQLLQQAKPFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLAADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSHEASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCILGKTGVNFGAGMTGGFAYVLDESGDFRKRVNPELVEVLSVDALAIHEEHLRGLITEHVQHTGSQRGEEILANWSTFATKFALVKPKSSDVKALLGHRSRSAAELRVQAQ", - "protein_translation_length": 1486, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010547" - ], - [ - "gene_synonym", - "GeneID:947723" - ], - [ - "gene_synonym", - "aspB" - ], - [ - "gene_synonym", - "ECK3203" - ], - [ - "gene_synonym", - "gltD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09832" - ], - [ - "gene_synonym", - "GI:16131103" - ], - [ - "gene_synonym", - "b3213" - ], - [ - "gene_synonym", - "psiQ" - ], - [ - "gene_synonym", - "EcoGene:EG10404" - ], - [ - "gene_synonym", - "NP_417680.1" - ], - [ - "gene_synonym", - "ossB" - ], - [ - "gene_synonym", - "JW3180" - ] - ], - "dna_sequence": "ATGAGTCAGAATGTTTATCAATTTATCGACCTGCAGCGCGTTGATCCGCCAAAGAAACCGCTGAAGATCCGCAAAATTGAGTTTGTTGAAATTTACGAGCCGTTTTCCGAAGGCCAGGCCAAAGCGCAGGCTGACCGCTGCCTGTCGTGCGGCAACCCATACTGCGAGTGGAAATGCCCGGTACACAACTACATCCCGAACTGGCTGAAGCTCGCCAACGAGGGGCGTATTTTTGAAGCGGCGGAACTGTCGCACCAGACCAACACCCTGCCGGAAGTTTGCGGACGAGTCTGCCCGCAAGACCGTCTGTGCGAAGGTTCCTGCACTCTGAACGATGAGTTTGGCGCGGTGACCATCGGCAACATTGAGCGCTATATCAACGATAAAGCGTTCGAGATGGGCTGGCGTCCGGATATGTCTGGTGTGAAACAGACCGGTAAAAAAGTGGCGATTATCGGCGCAGGCCCGGCAGGTCTGGCGTGTGCGGATGTCCTGACGCGTAACGGCGTAAAAGCCGTTGTCTTCGACCGTCATCCAGAAATTGGCGGGCTGCTGACCTTCGGTATTCCGGCCTTCAAGCTGGAAAAAGAGGTAATGACGCGTCGCCGTGAAATCTTCACCGGCATGGGTATTGAATTCAAACTCAATACCGAAGTGGGCCGCGACGTACAGCTGGACGATCTGCTGAGTGATTACGATGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGCCAACACCAAACAGTTAATGGGCTTTGGTGAAACCCGCGACGAACCGTTCGTCAGCATGGAAGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTCCCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAACCGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGCAGATGCGGTGATCATGGCGTTTGGTTTCCGTCCACACAACATGGAATGGCTGGCAAAACACAGCGTCGAGCTGGATTCACAAGGCCGCATCATCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTGGCGGCGATATCGTCCGTGGTTCCGATCTGGTGGTGACCGCTATTGCCGAAGGTCGTAAGGCGGCAGACGGTATTATGAACTGGCTGGAAGTTTAA", 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"gene_synonym", - "GeneID:947746" - ], - [ - "gene_synonym", - "ASAP:ABE-0010549" - ], - [ - "gene_synonym", - "GI:16131104" - ], - [ - "gene_synonym", - "b3214" - ], - [ - "gene_synonym", - "JW3181" - ], - [ - "gene_synonym", - "EcoGene:EG11514" - ], - [ - "gene_synonym", - "ossB" - ], - [ - "gene_synonym", - "NP_417681.1" - ], - [ - "gene_synonym", - "gltF" - ] - ], - "dna_sequence": "ATGTTTTTCAAAAAGAACCTCACAACAGCTGCTATTTGTGCAGCACTTTCTGTTGCAGCATTCAGTGCCATGGCAACAGATTCAACTGATACAGAATTAACTATCATCGGCGAGTATACCCCTGGTGCATGTACCCCAGTTGTTACGGGCGGCGGCATTGTTGACTATGGGAAACATCATAACAGTGCGCTGAATCCGACCGGTAAAAGTAATAAACTGGTTCAACTGGGCCGCAAAAACAGCACATTAAATATAACCTGCACAGCACCAACGCTAATTGCTGTAACCTCCAAGGATAACCGTCAGTCGACCATTGTAGCGTTAAACGACACATCCTATATTGAAAAAGCTTATGATACTCTCGTAGATATGAAGGGAACGAAAAACGCCTTTGGTTTAGGTTCTGCGCCTAATGGACAAAAAATTGGCGCTGCATCCATTGGTATTGACAGGTCTAATGGTGGGATTCACGCGGCGGACGATACAGGTGAAATTCCTGTCGACCTGATTCAAACTGACCACTGGTCAGCAGCGACCCCCACATGGAAAGCCTCATCTAATGGCGCATTCTGCTCGCTGACAAGTTGCTCAGCAATCGAGCGCGGTTATTCTGTTGCAAAAACAGGGGAACTGACACCTGTTGCTATTACAGCGGTCACCTTCCCGTTACTGATTGATGCTGCGGTAAATGACAATACTATTCTTGGTTCTGATGAAACGATCAAACTGGATGGTAACGTCACTATCAGCGTTCAGTATTTATAA", - "dna_sequence_length": 765, - "functions": [ - "periplasmic protein" - ], - "id": "CDS_3159", - "location": [ - [ - "NC_000913", - 3361176, - "+", - 765 - ] - ], - "md5": "3d8aa7f6aa795816fe3d55c16d3e820d", - "parent_gene": "", - "protein_md5": "8ac83ad509ec54e5dc677b8bdc2e6c61", - "protein_translation": "MFFKKNLTTAAICAALSVAAFSAMATDSTDTELTIIGEYTPGACTPVVTGGGIVDYGKHHNSALNPTGKSNKLVQLGRKNSTLNITCTAPTLIAVTSKDNRQSTIVALNDTSYIEKAYDTLVDMKGTKNAFGLGSAPNGQKIGAASIGIDRSNGGIHAADDTGEIPVDLIQTDHWSAATPTWKASSNGAFCSLTSCSAIERGYSVAKTGELTPVAITAVTFPLLIDAAVNDNTILGSDETIKLDGNVTISVQYL", - "protein_translation_length": 254, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28722" - ], - [ - "gene_synonym", - "ASAP:ABE-0010552" - ], - [ - "gene_synonym", - "NP_417682.1" - ], - [ - "gene_synonym", - "ECK3205" - ], - [ - "gene_synonym", - "GeneID:947741" - ], - [ - "gene_synonym", - "b3215" - ], - [ - "gene_synonym", - "GI:16131105" - ], - [ - "gene_synonym", - "EcoGene:EG11515" - ], - [ - "gene_synonym", - "yhcA" - ], - [ - "gene_synonym", - "JW3182" - ] - ], - "dna_sequence": "ATGCTCAGACACATTACATTCACTGTATTTATAACAACATCAATGAATACCTTAGCCACAGGGATGGTTCCTGAAACATCAGTATTGCTGGTTGATGAAAAGCGTGGTGAAGCTAGTATTAATATTAAGAATACAGATGATCATCCTTCATTGCTTTACACCACCATTGTTGATTTGCCTGAAAGCAATAAATCAATTCGTTTAATCCCGACTCAGCCCGTTATTCGTGTTGAAGCCGGTCAAGTACAACAGGTTCGATTTTTACTTCAGGCGACTGTTCCTCTGCAATCAGAAGAGCTGAAACGCGTAACGTTCGAAGGTATTCCACCAAAAGATGACAAGAGCAGCAGAGTTACTGTTTCAATTCGTCAGGATCTACCTGTACTGATCCACCCGGCTTCCCTGCCGGAAGAGCGAGAGACCTGGAAATTCCTGGAATGGCGTAAAAATGGCGACCAAATTGAGATTAGCAACCCCAGTAATTATGTCGTTCGTATGACCTTACAATTTAAAACGCTCCCTTCAGGAAAAACGGGGGCTATAAATAAGACCTATTTTCTACCACACACCAGTACAACTACTGCATTAACAAACGCTACGGATACAAAAGTCGAGTTTTACCCAGCCAGCCGATATGGTTATCGCGGTAATAAATATGTCACTGACTTAAAATAA", - "dna_sequence_length": 675, - "functions": [ - "putative periplasmic chaperone protein" - ], - "id": "CDS_3160", - "location": [ - [ - "NC_000913", - 3362112, - "+", - 675 - ] - ], - "md5": "006f58693708927fb98112d89a4c2ae8", - "parent_gene": "", - "protein_md5": "71a933af378f94e33fadd2a9289bd6e0", - "protein_translation": "MLRHITFTVFITTSMNTLATGMVPETSVLLVDEKRGEASINIKNTDDHPSLLYTTIVDLPESNKSIRLIPTQPVIRVEAGQVQQVRFLLQATVPLQSEELKRVTFEGIPPKDDKSSRVTVSIRQDLPVLIHPASLPEERETWKFLEWRKNGDQIEISNPSNYVVRMTLQFKTLPSGKTGAINKTYFLPHTSTTTALTNATDTKVEFYPASRYGYRGNKYVTDLK", - "protein_translation_length": 224, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010554" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45420" - ], - [ - "gene_synonym", - "ECK3206" - ], - [ - "gene_synonym", - "NP_417683.1" - ], - [ - "gene_synonym", - "GI:16131106" - ], - [ - "gene_synonym", - "b3216" - ], - [ - "gene_synonym", - "GeneID:947738" - ], - [ - "gene_synonym", - "JW3183" - ], - [ - "gene_synonym", - "EcoGene:EG12810" - ], - [ - "gene_synonym", - "yhcD" - ] - ], - "dna_sequence": "ATGTTAAAAAAAACGTTACTGGCCTACACCATTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCATTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAACAGCTGCGCTGCTAAACTACTCTCTGATGAGCAGCCGTGCAGAATTTTCTAATGGGAGTTCGGACTACTCCCAGGCTGCACTTGAAGGCGGGATTAATATTAATGACTGGATGTTACGCAGCCATCAGTTCCTTACACAAACAAATGGCACATTCAGTAACCAGAACTCGTCAACCTACCTTCAACGTACCTTTACAGATCTTAAAACACTCATGCGAGCAGGTGAAGTTAACCTCAATAATAGCGTGTTGGAAGGAGCCAGTATTTACGGTATCGAAATCGCACCGGACAACGCATTGCAAACCAGCGGCAGTGGTGTGCAAGTTACTGGTATAGCCAACACCTCTCAGGCTCGTGTCGAGATTCGTCAACAAGGAGTTTTAATTCATTCCATTCTGGTTCCTGCGGGCGCATTCACTATCCCTGATGTACCTGTTCGCAATGGTAATAGTGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTGGGTAATTAGTGCATCGAGCGGATGGAATCTGACACGCTGGAGTGCAATGAACGGCGGCGTTATCGTAGCAGAAAATTATCAGGCGGCATCAATCCGGTCGAGTCTGGTTCCCCTGCCCGATTTAACAGTGAGCAGCCAAATTAGTACATCGCAGGATACGAAAGACTCACTGCAAGGACAGAAATATCGTCTTGACGCGAACTACAATCTCCCATTTTCACTTGGGCTAACAACCAGCCTCACTCGATCTGATCGCCATTATCGCGAACTGTCTGAAGCGATTGATGATGATTATACCGATCCGACTAAAAGCACTTATGCGCTTGGTTTAAACTGGTCTAACTCCATTCTGGGTGGTTTCAACATCAGTGGCTATAAAACATATAGTTACGACGGTGACAATGACTCAAGCAACCTTAATATTAACTGGAACAAAGCGTTCAAACACGCCACGGTTTCCGTCAACTGGCAGCATCAACTTAGTGCTTCAGAAAATAATGAAGACGATGGTGATCTGTTCTACGTCAACATCAGTATTCCATTTGGCAGATCAAACACCGCCACACTGTATACTCGCCATGACGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGGGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATGATCAAACAAGGCCGTGGTGCAGTAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAAAGATGTGTTCTATGAGACAGCAACAGGAGAGTGCCAATGA", - "dna_sequence_length": 2382, - "functions": [ - "putative outer membrane fimbrial subunit usher protein" - ], - "id": "CDS_3161", - "location": [ - [ - "NC_000913", - 3362807, - "+", - 2382 - ] - ], - "md5": "db7d97cbb54ea0be79e8db6c77a19965", - "parent_gene": "", - "protein_md5": "842aef92aa45d076900102c61261a51e", - "protein_translation": "MLKKTLLAYTIGFAFSPPANADGIEIAAVDFDRETLKSLGVDPNISHYFSRSARFLPGEYSLIVSVNGEKKGNIATRFDENGDICLDQAFLQQAGLKIPSEEKNGCYDYILSYPGTTITPLPNQEALDIIVSPQAIIPIGLDLTNAATGGTAALLNYSLMSSRAEFSNGSSDYSQAALEGGININDWMLRSHQFLTQTNGTFSNQNSSTYLQRTFTDLKTLMRAGEVNLNNSVLEGASIYGIEIAPDNALQTSGSGVQVTGIANTSQARVEIRQQGVLIHSILVPAGAFTIPDVPVRNGNSDLNVTVVETDGSSHNYIVPSTLFNQHVESFQGYRFAIGRVDDDYDESPWVISASSGWNLTRWSAMNGGVIVAENYQAASIRSSLVPLPDLTVSSQISTSQDTKDSLQGQKYRLDANYNLPFSLGLTTSLTRSDRHYRELSEAIDDDYTDPTKSTYALGLNWSNSILGGFNISGYKTYSYDGDNDSSNLNINWNKAFKHATVSVNWQHQLSASENNEDDGDLFYVNISIPFGRSNTATLYTRHDDHKTHYGTGVMGVVSDEMSYYVNAERDHDERETSLNGSISSNLHYTQVSLAAGASGSDSRTYNGTMSGGIAVHDQGVTFSPWTINDTFAIAKMDNNIAGVRITSQAGPVWTDFRGNAVIPSIQPWRTSGVEIDTASLPKNVDIGNGTKMIKQGRGAVGKVGFSAITQRRALLNITLSDGKKLPRGVAIEDSEGNYLTTSVDDGVVFLNNIKPDMVLDIKDEQQSCRIHLTFPEDAPKDVFYETATGECQ", - "protein_translation_length": 793, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4569" - ], - [ - "gene_synonym", - "ASAP:ABE-0285070" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45421" - ], - [ - "gene_synonym", - "ASAP:ABE-0010556" - ], - [ - "gene_synonym", - "ECK3207" - ], - [ - "gene_synonym", - "JW3187" - ], - [ - "gene_synonym", - "GeneID:4056032" - ], - [ - "gene_synonym", - "ASAP:ABE-0285102" - ], - [ - "gene_synonym", - "JW3184" - ], - [ - "gene_synonym", - "EcoGene:EG12811" - ], - [ - "gene_synonym", - "yhcE" - ] - ], - "dna_sequence": "ATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTCCAACAACGGATTTGGATTTGGCCCGAATGGTTCATTAAATCTGATCGCCAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGTACTTCCCCCAATAATTGGCTGGTGTTTATGCAAAATGGTCAAGAAGTGGTAATTGATAGCGGTAAAAGCGTTAGCCTCACACTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGA", - "dna_sequence_length": 546, - "id": "CDS_3162", - "location": [ - [ - "NC_000913", - 3365185, - "+", - 367 - ], - [ - "NC_000913", - 3366751, - "+", - 179 - ] - ], - "md5": "5e13755129c14a0d526d212f62aea93a", - "parent_gene": "", - "protein_md5": "f0556894c4199c1157e8714f49ff9eb1", - "protein_translation": "MKRIITGCLLLNFAMAAQAECNISSSIQNIDYGKRSAAMRQVDRGKTTQLADRTITLVMQCDQDAHIRVQLNTANISNNGFGFGPNGSLNLIASDAFSGSNNLDLALASGKNDNPGSTGTASISTSPNNWLVFMQNGQEVVIDSGKSVSLTLTMAPAFKDEGELTDMTDITGNLTVLVEAK", - "protein_translation_length": 181, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG40008" - ], - [ - "gene_synonym", - "GeneID:947743" - ], - [ - "gene_synonym", - "ASAP:ABE-0010559" - ], - [ - "gene_synonym", - "insH1" - ], - [ - "gene_synonym", - "NP_417685.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CE57" - ], - [ - "gene_synonym", - "ECK0261" - ], - [ - "gene_synonym", - "GI:16131108" - ], - [ - "gene_synonym", - "b3218" - ] - ], - "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", - "dna_sequence_length": 1017, - "functions": [ - "IS5 transposase and trans-activator" - ], - "id": "CDS_3163", - "location": [ - [ - "NC_000913", - 3366718, - "-", - 1017 - ] - ], - "md5": "59571096a52db4971db033e04651ef59", - "parent_gene": "", - "protein_md5": "75d20978a034ac97cbf88235b32b7ad9", - "protein_translation": "MFVIWSHRTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQILPWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQLGNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKNKTAINIEYMKASIRARVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQWERSH", - "protein_translation_length": 338, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45422" - ], - [ - "gene_synonym", - "ECK3208" - ], - [ - "gene_synonym", - "NP_417686.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010564" - ], - [ - "gene_synonym", - "GeneID:947735" - ], - [ - "gene_synonym", - "JW3188" - ], - [ - "gene_synonym", - "EcoGene:EG12812" - ], - [ - "gene_synonym", - "yhcF" - ], - [ - "gene_synonym", - "b3219" - ], - [ - "gene_synonym", - "GI:16131109" - ] - ], - "dna_sequence": "ATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTCAATAGACTTTCAACGCAGCACTACACACAGATTGGAACACGTAATATTAATATGACTATAACTTGCGAATCCGCTACCGGCATTGCGATTACCGCTCGTGATACACGAATGGATAGTATGACCACCGGAAAAGATAGTGGGGGTCAGAGTGGTGTAAAATATACCTTAAATGGCGGAGGTTATATTAGCCAGACAACGCGCTTATTCGGCTTAGGGAAAACAAAAGATAATAAAAATATCGGTAGTTATGCCGTGTTAATTGATAGCAACAACATTAGTGCCAGCAATGGTAGCCAGACGTTAGCTGTATCAATAGCAGGTGCAGATGCCGTCATAACAGGGCAAAAAAGAGCATGGCAAACGCTCACCGCTTATCCGCTTGCAGTCGATCAAAGCTATTATTACACCTTTGTAAAACCAGGTGAAACAACCCCAACTCCTGTAACGAACGCCATTATACCGCTTCAGGTGAGCGCATCTATCGCGAATGATTTAGGCGGTTCAGAAAAAATCGAACTTGATGGGAAAGCTGTGATAAGCGTAGTCTACTTGTGA", - "dna_sequence_length": 717, - "functions": [ - "putative transcriptional regulator" - ], - "id": "CDS_3164", - "location": [ - [ - "NC_000913", - 3366926, - "+", - 717 - ] - ], - "md5": "efc18809f1c59dd791d3a0ef061a1d8f", - "parent_gene": "", - "protein_md5": "9d227e91f40487aec287306f3218866a", - "protein_translation": "MNNVKLLIAGSAFFAMSAQAADRVSIDVKVTLEAAACTPILSNGGVVNFGSHSVNRLSTQHYTQIGTRNINMTITCESATGIAITARDTRMDSMTTGKDSGGQSGVKYTLNGGGYISQTTRLFGLGKTKDNKNIGSYAVLIDSNNISASNGSQTLAVSIAGADAVITGQKRAWQTLTAYPLAVDQSYYYTFVKPGETTPTPVTNAIIPLQVSASIANDLGGSEKIELDGKAVISVVYL", - "protein_translation_length": 238, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417687.1" - ], - [ - "gene_synonym", - "ECK3209" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45423" - ], - [ - "gene_synonym", - "b3220" - ], - [ - "gene_synonym", - "ASAP:ABE-0010567" - ], - [ - "gene_synonym", - "GI:16131110" - ], - [ - "gene_synonym", - "JW3189" - ], - [ - "gene_synonym", - "GeneID:947739" - ], - [ - "gene_synonym", - "yhcG" - ], - [ - "gene_synonym", - "EcoGene:EG12813" - ] - ], - "dna_sequence": "ATGGAATCGCTCTCAGAAGGAACCACAGCAGGCTACCAGCAAATCCACGACGGTATTATTCATCTGGTCGATAGCGCCCGGACGGAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCAGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAATTCCGCAGACACCGTCTGCAGAATTCCCATCGGCAAAGATTTGGCAGACGCTGTCTGCCAAATCTTTCCCCTTGCCCAGGTCCACCTACGTCCGTTTACTTTCCGTTAAAAACGCTGACGCCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAGCGGCAAATTGCGACCCAGTTTTATGAGCGGACACTACTGTCACATGACAAATCAGCCATGCTGCAACAACACGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAATATTCAGAATCCGATTTTGAGGAGGCGCTGATCAACCACCTGATGGATTTCATGCTGGAACTTGGGGATGATTTTGCCTTTGTTGGTCGGCAGCGAAGGTTACGCATTGATGACAACTGGTTTCGTGTCGATCTGCTGTTTTTCCACCGCCGTTTACGCTGCCTGCTAATCGTCGATCTAAAAGTGGGCAAATTCAGCTATAGCGATGCCGGACAGATGAATATGTATCTCAACTACGCCAAAGAGCACTGGACGCTACCGGATGAAAATCCGCCCATCGGTCTGGTTCTCTGTGCAGAGAAAGGAGCCGGAGAAGCGCATTATGCTCTGGCAGGTTTGCCTAACACCGTTCTGGCAAGCGAATATAAGATGCAACTACCTGATGAGAAACGACTCGCAGATGAACTCGTTCGAACACAGGCGGTGCTAGAGGAAGGCTATAGACGCCGTTAA", - "dna_sequence_length": 1128, - "functions": [ - "DUF1016 family protein in the PD-(D/E)XK nuclease superfamily" - ], - "id": "CDS_3165", - "location": [ - [ - "NC_000913", - 3367827, - "+", - 1128 - ] - ], - "md5": "62e56f038b49787db0d8e786cc68e6d4", - "parent_gene": "", - "protein_md5": "99bf9f3bbf46967ca87141c987dc3cb2", - "protein_translation": "MESLSEGTTAGYQQIHDGIIHLVDSARTETVRSVNALMTATYQEIGRRIVEFEQGGEARAAYGAQLIKRLSKDLCLRYKRGFSAKNLRQMRLFYLFFQHVEIHQTMSGELTPLGIPQTPSAEFPSAKIWQTLSAKSFPLPRSTYVRLLSVKNADARSFYEKETLRCGWSVRQLERQIATQFYERTLLSHDKSAMLQQHAPAETHILPQQAIRDPFVLEFLELKDEYSESDFEEALINHLMDFMLELGDDFAFVGRQRRLRIDDNWFRVDLLFFHRRLRCLLIVDLKVGKFSYSDAGQMNMYLNYAKEHWTLPDENPPIGLVLCAEKGAGEAHYALAGLPNTVLASEYKMQLPDEKRLADELVRTQAVLEEGYRRR", - "protein_translation_length": 375, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45424" - ], - [ - "gene_synonym", - "GI:16131111" - ], - [ - "gene_synonym", - "NP_417688.1" - ], - [ - "gene_synonym", - "GeneID:947750" - ], - [ - "gene_synonym", - "b3221" - ], - [ - "gene_synonym", - "ECK3210" - ], - [ - "gene_synonym", - "JW3190" - ], - [ - "gene_synonym", - "yhcH" - ], - [ - "gene_synonym", - "ASAP:ABE-0010569" - ], - [ - "gene_synonym", - "EcoGene:EG12814" - ] - ], - "dna_sequence": "ATGATGATGGGTGAAGTACAGTCATTACCGTCTGCTGGGTTACATCCTGCGTTACAGGACGCGTTAACGCTGGCATTAGCTGCCAGACCGCAAGAAAAAGCGCCGGGTCGTTACGAATTACAGGGCGACAATATCTTTATGAATGTCATGACGTTTAACACTCAATCGCCCGTCGAGAAAAAAGCGGAATTGCACGAGCAATACATTGATATCCAGCTGTTATTAAACGGTGAGGAACGGATTCTGTTTGGCATGGCAGGCACTGCGCGTCAGTGTGAAGAGTTCCACCATGAGGATGATTATCAGCTTTGCAGCACCATTGATAACGAGCAAGCCATCATCTTAAAACCGGGAATGTTCGCCGTGTTTATGCCAGGTGAACCGCATAAACCAGGATGCGTTGTCGGCGAGCCTGGAGAGATTAAAAAGGTTGTGGTGAAGGTTAAGGCTGATTTAATGGCTTAA", - "dna_sequence_length": 465, - "functions": [ - "DUF386 family protein, cupin superfamily" - ], - "id": "CDS_3166", - "location": [ - [ - "NC_000913", - 3369478, - "-", - 465 - ] - ], - "md5": "4ae1c041e48b15fbca90b37636728d10", - "parent_gene": "", - "protein_md5": "67388c685c9907204af0f852b1362933", - "protein_translation": "MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQLCSTIDNEQAIILKPGMFAVFMPGEPHKPGCVVGEPGEIKKVVVKVKADLMA", - "protein_translation_length": 154, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45425" - ], - [ - "gene_synonym", - "nanK" - ], - [ - "gene_synonym", - "NP_417689.4" - ], - [ - "gene_synonym", - "b3222" - ], - [ - "gene_synonym", - "ASAP:ABE-0010571" - ], - [ - "gene_synonym", - "ECK3211" - ], - [ - "gene_synonym", - "GeneID:947757" - ], - [ - "gene_synonym", - "GI:90111558" - ], - [ - "gene_synonym", - "yhcI" - ], - [ - "gene_synonym", - "JW5538" - ], - [ - "gene_synonym", - "EcoGene:EG12815" - ] - ], - "dna_sequence": "ATGACCACACTGGCGATTGATATCGGCGGTACTAAACTTGCCGCCGCGCTGATTGGCGCTGACGGGCAGATCCGCGATCGTCGTGAACTTCCTACGCCAGCCAGCCAGACACCAGAAGCCTTGCGTGATGCCTTATCCGCATTAGTCTCTCCGTTGCAAGCTCATGCGCAGCGGGTTGCCATCGCTTCGACCGGGATAATCCGTGACGGCAGCTTGCTGGCGCTTAATCCGCATAATCTTGGTGGATTGCTACACTTTCCGTTAGTCAAAACGCTGGAACAACTTACCAATTTGCCGACCATTGCCATTAACGACGCGCAGGCCGCAGCATGGGCGGAGTTTCAGGCGCTGGATGGCGATATAACCGATATGGTCTTTATCACCGTTTCCACCGGCGTTGGCGGCGGTGTAGTGAGCGGCTGCAAACTGCTTACCGGCCCTGGCGGTCTGGCGGGGCATATCGGGCATACGCTTGCCGATCCACACGGCCCAGTCTGCGGCTGTGGACGCACAGGTTGCGTGGAAGCGATTGCTTCTGGTCGCGGCATTGCAGCGGCAGCGCAGGGGGAGTTGGCTGGCGCGGATGCGAAAACTATTTTCACGCGCGCCGGGCAGGGTGACGAGCAGGCGCAGCAGCTGATTCACCGCTCCGCACGTACGCTTGCAAGGCTGATCGCTGATATTAAAGCCACAACTGATTGCCAGTGCGTGGTGGTCGGTGGCAGCGTTGGTCTGGCAGAAGGGTATCTGGCGCTGGTGGAAACGTATCTGGCGCAGGAGCCAGCGGCATTTCATGTTGATTTACTGGCGGCGCATTACCGCCATGATGCAGGTTTACTTGGGGCTGCGCTGTTGGCCCAGGGAGAAAAATTATGA", - "dna_sequence_length": 876, - "functions": [ - "N-acetylmannosamine kinase" - ], - "id": "CDS_3167", - "location": [ - [ - "NC_000913", - 3370350, - "-", - 876 - ] - ], - "md5": "2b3fda4755b24ae0def24e4635fa6fb7", - "parent_gene": "", - "protein_md5": "e53821ca4ede87a7a00588cae24a337d", - "protein_translation": "MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIASGRGIAAAAQGELAGADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQGEKL", - "protein_translation_length": 291, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010575" - ], - [ - "gene_synonym", - "b3223" - ], - [ - "gene_synonym", - "nanE" - ], - [ - "gene_synonym", - "GI:16131113" - ], - [ - "gene_synonym", - "ECK3212" - ], - [ - "gene_synonym", - "GeneID:947745" - ], - [ - "gene_synonym", - "yhcJ" - ], - [ - "gene_synonym", - "JW3192" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A761" - ], - [ - "gene_synonym", - "NP_417690.1" - ], - [ - "gene_synonym", - "EcoGene:EG12816" - ] - ], - "dna_sequence": "ATGTCGTTACTTGCACAACTGGATCAAAAAATCGCTGCTAACGGTGGCCTGATTGTCTCCTGCCAGCCGGTTCCGGACAGCCCGCTCGATAAACCCGAAATCGTCGCCGCCATGGCATTAGCGGCAGAACAGGCGGGCGCGGTTGCCATTCGCATTGAAGGTGTGGCAAATCTGCAAGCCACGCGTGCGGTGGTGAGCGTGCCGATTATTGGAATTGTGAAACGCGATCTGGAGGATTCTCCGGTACGCATCACGGCCTATATTGAAGATGTTGATGCGCTGGCGCAGGCGGGCGCGGACATTATCGCCATTGACGGCACCGACCGCCCGCGTCCGGTGCCTGTTGAAACGCTGCTGGCACGTATTCACCATCACGGTTTACTGGCGATGACCGACTGCTCAACGCCGGAAGACGGCCTGGCATGCCAAAAGCTGGGAGCCGAAATTATTGGCACTACGCTTTCTGGCTATACCACGCCTGAAACGCCAGAAGAGCCGGATCTGGCGCTGGTGAAAACGTTGAGCGACGCCGGATGTCGGGTGATTGCCGAAGGGCGTTACAACACGCCTGCTCAGGCGGCGGATGCGATGCGCCACGGCGCGTGGGCGGTGACGGTCGGTTCTGCAATCACGCGTCTTGAGCACATTTGTCAGTGGTACAACACAGCGATGAAAAAGGCGGTGCTATGA", - "dna_sequence_length": 690, - "functions": [ - "putative N-acetylmannosamine-6-P epimerase" - ], - "id": "CDS_3168", - "location": [ - [ - "NC_000913", - 3371036, - "-", - 690 - ] - ], - "md5": "09f7173484a2af133d50f076e5475345", - "parent_gene": "", - "protein_md5": "6d009ab9d5f35a3f58241b7a35cf21ac", - "protein_translation": "MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQAGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADIIAIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTPETPEEPDLALVKTLSDAGCRVIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQWYNTAMKKAVL", - "protein_translation_length": 229, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947740" - ], - [ - "gene_synonym", - "ASAP:ABE-0010577" - ], - [ - "gene_synonym", - "EcoGene:EG20145" - ], - [ - "gene_synonym", - "NP_417691.4" - ], - [ - "gene_synonym", - "b3224" - ], - [ - "gene_synonym", - "ECK3213" - ], - [ - "gene_synonym", - "GI:90111559" - ], - [ - "gene_synonym", - "JW3193" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P41036" - ], - [ - "gene_synonym", - "nanT" - ] - ], - "dna_sequence": "ATGAGTACTACAACCCAGAATATCCCGTGGTATCGCCATCTCAACCGTGCACAATGGCGCGCATTTTCCGCTGCCTGGTTGGGATATCTGCTTGACGGTTTTGATTTCGTTTTAATCGCCCTGGTACTCACCGAAGTACAAGGTGAATTCGGGCTGACGACGGTGCAGGCGGCAAGTCTGATCTCTGCAGCCTTTATCTCTCGCTGGTTCGGCGGCCTGATGCTCGGCGCTATGGGTGACCGCTACGGGCGTCGTCTGGCAATGGTCACCAGCATCGTTCTCTTCTCGGCCGGGACGCTGGCCTGCGGCTTTGCGCCAGGCTACATCACCATGTTTATCGCTCGTCTGGTCATCGGCATGGGGATGGCGGGTGAATACGGTTCCAGCGCCACCTATGTCATTGAAAGCTGGCCAAAACATCTGCGTAACAAAGCCAGTGGTTTTTTGATTTCAGGCTTCTCTGTGGGGGCCGTCGTTGCCGCTCAGGTCTATAGCCTGGTGGTTCCGGTCTGGGGCTGGCGTGCGCTGTTCTTTATCGGCATTTTGCCAATCATCTTTGCTCTCTGGCTGCGTAAAAACATCCCGGAAGCGGAAGACTGGAAAGAGAAACACGCAGGTAAAGCACCAGTACGCACAATGGTGGATATTCTCTACCGTGGTGAACATCGCATTGCCAATATCGTAATGACACTGGCGGCGGCTACTGCGCTGTGGTTCTGCTTCGCCGGTAACCTGCAAAATGCCGCGATCGTCGCTGTTCTTGGGCTGTTATGCGCCGCAATCTTTATCAGCTTTATGGTGCAGAGTGCAGGCAAACGCTGGCCAACGGGCGTAATGCTGATGGTGGTCGTGTTGTTTGCTTTCCTCTACTCATGGCCGATTCAGGCGCTGCTGCCAACGTATCTGAAAACCGATCTGGCTTATAACCCGCATACTGTAGCCAATGTGCTGTTCTTTAGTGGCTTTGGCGCGGCGGTGGGATGCTGCGTAGGTGGCTTCCTCGGTGACTGGCTGGGAACCCGCAAAGCGTACGTTTGTAGCCTGCTGGCCTCGCAGCTGCTGATTATTCCGGTATTTGCGATTGGCGGCGCAAACGTCTGGGTGCTCGGTCTGTTACTGTTCTTCCAGCAAATGCTTGGACAAGGGATCGCCGGGATCTTACCAAAACTGATTGGCGGTTATTTCGATACCGACCAGCGTGCAGCGGGCCTGGGCTTTACCTACAACGTTGGCGCATTGGGCGGTGCACTGGCCCCAATCATCGGCGCGTTGATCGCTCAACGTCTGGATCTGGGTACTGCGCTGGCATCGCTCTCGTTCAGTCTGACGTTCGTGGTGATCCTGCTGATTGGGCTGGATATGCCTTCTCGCGTTCAGCGTTGGTTGCGCCCGGAAGCGTTGCGTACTCATGACGCTATCGACGGTAAACCATTCAGCGGTGCCGTGCCGTTTGGCAGCGCCAAAAACGATTTAGTCAAAACCAAAAGTTAA", - "dna_sequence_length": 1491, - "functions": [ - "sialic acid transporter" - ], - "id": "CDS_3169", - "location": [ - [ - "NC_000913", - 3372574, - "-", - 1491 - ] - ], - "md5": "c9690d348d439491f2a87e6456e99d0c", - "parent_gene": "", - "protein_md5": "41a833559634f29dc05fe8bf01d37bdf", - "protein_translation": "MSTTTQNIPWYRHLNRAQWRAFSAAWLGYLLDGFDFVLIALVLTEVQGEFGLTTVQAASLISAAFISRWFGGLMLGAMGDRYGRRLAMVTSIVLFSAGTLACGFAPGYITMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSVGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKNIPEAEDWKEKHAGKAPVRTMVDILYRGEHRIANIVMTLAAATALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSAGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLAYNPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLASQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGIAGILPKLIGGYFDTDQRAAGLGFTYNVGALGGALAPIIGALIAQRLDLGTALASLSFSLTFVVILLIGLDMPSRVQRWLRPEALRTHDAIDGKPFSGAVPFGSAKNDLVKTKS", - "protein_translation_length": 496, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "npl" - ], - [ - "gene_synonym", - "ASAP:ABE-0010579" - ], - [ - "gene_synonym", - "GeneID:947742" - ], - [ - "gene_synonym", - "nanA" - ], - [ - "gene_synonym", - "b3225" - ], - [ - "gene_synonym", - "EcoGene:EG10637" - ], - [ - "gene_synonym", - "ECK3214" - ], - [ - "gene_synonym", - "JW3194" - ], - [ - "gene_synonym", - "GI:16131115" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6L4" - ], - [ - "gene_synonym", - "NP_417692.1" - ] - ], - "dna_sequence": "ATGGCAACGAATTTACGTGGCGTAATGGCTGCACTCCTGACTCCTTTTGACCAACAACAAGCACTGGATAAAGCGAGTCTGCGTCGCCTGGTTCAGTTCAATATTCAGCAGGGCATCGACGGTTTATACGTGGGTGGTTCGACCGGCGAGGCCTTTGTACAAAGCCTTTCCGAGCGTGAACAGGTACTGGAAATCGTCGCCGAAGAGGCGAAAGGTAAGATTAAACTCATCGCCCACGTCGGTTGCGTCAGCACCGCCGAAAGCCAACAACTTGCGGCATCGGCTAAACGTTATGGCTTCGATGCCGTCTCCGCCGTCACGCCGTTCTACTATCCTTTCAGCTTTGAAGAACACTGCGATCACTATCGGGCAATTATTGATTCGGCGGATGGTTTGCCGATGGTGGTGTACAACATTCCAGCCCTGAGTGGGGTAAAACTGACCCTGGATCAGATCAACACACTTGTTACATTGCCTGGCGTAGGTGCGCTGAAACAGACCTCTGGCGATCTCTATCAGATGGAGCAGATCCGTCGTGAACATCCTGATCTTGTGCTCTATAACGGTTACGACGAAATCTTCGCCTCTGGTCTGCTGGCGGGCGCTGATGGTGGTATCGGCAGTACCTACAACATCATGGGCTGGCGCTATCAGGGGATCGTTAAGGCGCTGAAAGAAGGCGATATCCAGACCGCGCAGAAACTGCAAACTGAATGCAATAAAGTCATTGATTTACTGATCAAAACGGGCGTATTCCGCGGCCTGAAAACTGTCCTCCATTATATGGATGTCGTTTCTGTGCCGCTGTGCCGCAAACCGTTTGGACCGGTAGATGAAAAATATCTGCCAGAACTGAAGGCGCTGGCCCAGCAGTTGATGCAAGAGCGCGGGTGA", - "dna_sequence_length": 894, - "functions": [ - "N-acetylneuraminate lyase" - ], - "id": "CDS_3170", - "location": [ - [ - "NC_000913", - 3373576, - "-", - 894 - ] - ], - "md5": "09dc1c889d681b9cc6ee6e78621ac469", - "parent_gene": "", - "protein_md5": "8c6264609850a1927d3dae67989bc9cb", - "protein_translation": "MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQLMQERG", - "protein_translation_length": 297, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:945468" - ], - [ - "gene_synonym", - "ASAP:ABE-0010584" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8W0" - ], - [ - "gene_synonym", - "ECK3215" - ], - [ - "gene_synonym", - "b3226" - ], - [ - "gene_synonym", - "yhcK" - ], - [ - "gene_synonym", - "JW3195" - ], - [ - "gene_synonym", - "NP_417693.3" - ], - [ - "gene_synonym", - "EcoGene:EG12817" - ], - [ - "gene_synonym", - "nanR" - ], - [ - "gene_synonym", - "GI:49176329" - ] - ], - "dna_sequence": "ATGGGCCTTATGAACGCATTTGATTCGCAAACCGAAGATTCTTCACCTGCAATTGGTCGCAACTTGCGTAGCCGCCCGCTGGCGCGTAAAAAACTCTCCGAAATGGTGGAAGAAGAGCTGGAACAGATGATCCGCCGTCGTGAATTTGGCGAAGGTGAACAATTACCGTCTGAACGCGAACTGATGGCGTTCTTTAACGTCGGGCGTCCTTCGGTGCGTGAAGCGCTGGCAGCGTTAAAACGCAAAGGTCTGGTGCAAATAAACAACGGCGAACGCGCTCGCGTCTCGCGTCCTTCTGCGGACACTATCATCGGTGAGCTTTCCGGCATGGCGAAAGATTTCCTTTCTCATCCCGGTGGGATTGCCCATTTCGAACAATTACGTCTGTTCTTTGAATCCAGTCTGGTGCGCTATGCGGCTGAACATGCCACCGATGAGCAAATCGATTTGCTGGCAAAAGCACTGGAAATCAACAGTCAGTCGCTGGATAACAACGCGGCATTCATTCGTTCAGACGTTGATTTCCACCGCGTGCTGGCGGAGATCCCCGGTAACCCAATCTTCATGGCGATCCACGTTGCCCTGCTCGACTGGCTTATTGCCGCACGCCCAACGGTTACCGATCAGGCACTGCACGAACATAACAACGTTAGTTATCAACAGCATATTGCGATCGTTGATGCGATCCGCCGTCATGATCCTGACGAAGCCGATCGTGCGTTGCAATCGCATCTCAACAGCGTCTCTGCTACCTGGCACGCTTTCGGTCAGACCACCAACAAAAAGAAATAA", - "dna_sequence_length": 792, - "functions": [ - "sialic acid-inducible nan operon repressor" - ], - "id": "CDS_3171", - "location": [ - [ - "NC_000913", - 3374489, - "-", - 792 - ] - ], - "md5": "a785ba7b773fbac26219011e02c91221", - "parent_gene": "", - "protein_md5": "f045ac8532b007ba5d1d09a74fe1186e", - "protein_translation": "MGLMNAFDSQTEDSSPAIGRNLRSRPLARKKLSEMVEEELEQMIRRREFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADTIIGELSGMAKDFLSHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQSLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDWLIAARPTVTDQALHEHNNVSYQQHIAIVDAIRRHDPDEADRALQSHLNSVSATWHAFGQTTNKKK", - "protein_translation_length": 263, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417694.1" - ], - [ - "gene_synonym", - "yhcL" - ], - [ - "gene_synonym", - "dcuD" - ], - [ - "gene_synonym", - "ASAP:ABE-0010589" - ], - [ - "gene_synonym", - "ECK3216" - ], - [ - "gene_synonym", - "GeneID:946575" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45428" - ], - [ - "gene_synonym", - "b3227" - ], - [ - "gene_synonym", - "EcoGene:EG12818" - ], - [ - "gene_synonym", - "JW3196" - ], - [ - "gene_synonym", - "GI:16131117" - ] - ], - "dna_sequence": "ATGTTCGGCATAATTATATCTGTCATCGTATTAATTACGATGGGCTATTTGATCCTGAAAAACTACAAACCTCAGGTGGTGCTGGCTGCCGCAGGTATCTTCCTGATGATGTGCGGTGTCTGGTTAGGGTTCGGTGGTGTACTCGATCCCACCAAAAGCAGCGGCTACTTGATCGTCGATATTTATAATGAAATCCTGCGCATGCTGTCCAACCGCATTGCCGGATTGGGGCTGTCGATTATGGCGGTGGGCGGTTATGCCCGCTACATGGAGCGCATAGGGGCCAGTCGCGCGATGGTGAGCTTGTTAAGCCGCCCGTTAAAACTCATTCGCTCGCCGTATATTATTCTGTCGGCAACTTACGTCATCGGCCAAATCATGGCGCAGTTTATTACCAGCGCCTCCGGTCTGGGTATGTTGCTGATGGTCACCTTATTTCCGACGCTGGTGAGTCTGGGAGTAAGTCGTCTCTCTGCGGTGGCAGTTATCGCAACCACGATGTCCATTGAGTGGGGGATTCTGGAAACGAACTCCATTTTTGCTGCCCAGGTAGCGGGAATGAAAATTGCCACATACTTCTTCCACTACCAGCTTCCGGTCGCCTCTTGCGTCATTATCTCGGTGGCGATCTCCCACTTTTTCGTGCAACGCGCTTTTGACAAAAAAGATAAAAATATCAATCACGAACAGGCAGAGCAAAAAGCTCTCGATAATGTCCCGCCGCTCTATTACGCCATTTTACCTGTGATGCCGTTAATCCTGATGCTCGGCTCGCTGTTCCTCGCCCACGTCGGGCTGATGCAGTCAGAACTGCATCTGGTGGTGGTGATGTTACTGAGTTTGACTGTGACGATGTTTGTTGAGTTCTTCCGCAAGCATAACTTGCGCGAAACAATGGACGATGTGCAGGCGTTTTTTGACGGCATGGGTACGCAGTTTGCCAACGTGGTAACGCTGGTGGTCGCGGGTGAAATATTTGCGAAAGGCTTAACGACGATTGGCACTGTCGATGCGGTTATCAGGGGGGCGGAGCATTCTGGTCTGGGCGGTATTGGCGTGATGATTATTATGGCGCTGGTCATTGCCATTTGTGCCATTGTGATGGGCTCTGGCAATGCGCCGTTTATGTCATTTGCCAGTCTTATTCCGAATATCGCAGCCGGACTACATGTACCAGCGGTTGTAATGATTATGCCGATGCATTTTGCCACGACGCTAGCGCGCGCGGTTTCGCCGATTACTGCGGTGGTGGTCGTTACGTCAGGAATTGCAGGCGTTTCGCCTTTTGCGGTGGTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAA", 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- "ECK3217" - ], - [ - "gene_synonym", - "sspB" - ], - [ - "gene_synonym", - "NP_417695.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFZ3" - ], - [ - "gene_synonym", - "GeneID:944774" - ], - [ - "gene_synonym", - "JW3197" - ], - [ - "gene_synonym", - "GI:16131118" - ] - ], - "dna_sequence": "ATGGATTTGTCACAGCTAACACCACGTCGTCCCTATCTGCTGCGTGCATTCTATGAGTGGTTGCTGGATAACCAGCTCACGCCGCACCTGGTGGTGGATGTGACGCTCCCTGGCGTGCAGGTTCCTATGGAATATGCGCGTGACGGGCAAATCGTACTCAACATTGCGCCGCGTGCTGTCGGCAATCTGGAACTGGCGAATGATGAGGTGCGCTTTAACGCGCGCTTTGGTGGCATTCCGCGTCAGGTTTCTGTGCCGCTGGCTGCCGTGCTGGCTATCTACGCCCGTGAAAATGGCGCAGGCACGATGTTTGAGCCTGAAGCTGCCTACGATGAAGATACCAGCATCATGAATGATGAAGAGGCATCGGCAGACAACGAAACCGTTATGTCGGTTATTGATGGCGACAAGCCAGATCACGATGATGACACTCATCCTGACGATGAACCTCCGCAGCCACCACGCGGTGGTCGACCGGCATTACGCGTTGTGAAGTAA", - "dna_sequence_length": 498, - "functions": [ - "ClpXP protease specificity enhancing factor" - ], - "id": "CDS_3173", - "location": [ - [ - "NC_000913", - 3376776, - "-", - 498 - ] - ], - "md5": "061ec03ab6550a3a415c82ce9d026c79", - "parent_gene": "", - "protein_md5": "0344807a9a3d95e3bb0f87f63128f377", - "protein_translation": "MDLSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPMEYARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGTMFEPEAAYDEDTSIMNDEEASADNETVMSVIDGDKPDHDDDTHPDDEPPQPPRGGRPALRVVK", - "protein_translation_length": 165, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3229" - ], - [ - "gene_synonym", - "ECK3218" - ], - [ - "gene_synonym", - "ASAP:ABE-0010594" - ], - [ - "gene_synonym", - "EcoGene:EG10977" - ], - [ - "gene_synonym", - "ssp" - ], - [ - "gene_synonym", - "sspA" - ], - [ - "gene_synonym", - "GeneID:944744" - ], - [ - "gene_synonym", - "GI:16131119" - ], - [ - "gene_synonym", - "NP_417696.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACA3" - ], - [ - "gene_synonym", - "JW3198" - ], - [ - "gene_synonym", - "pog" - ] - ], - "dna_sequence": "ATGGCTGTCGCTGCCAACAAACGTTCGGTAATGACGCTGTTTTCCGGTCCTACTGACATCTATAGCCATCAGGTCCGCATTGTGCTGGCTGAGAAAGGTGTAAGTTTCGAGATCGAACACGTGGAAAAGGACAATCCGCCTCAGGATCTGATTGACCTCAACCCGAATCAGAGCGTTCCGACCCTGGTGGATCGTGAGCTGACCCTGTGGGAATCTCGCATCATTATGGAATATCTGGATGAGCGTTTCCCGCATCCGCCACTGATGCCTGTTTACCCGGTAGCTCGCGGTGAAAGCCGTCTGTACATGCATCGCATCGAAAAAGACTGGTACACGCTGATGAACACCATCATCAACGGTTCAGCTTCTGAAGCAGATGCCGCACGTAAGCAACTGCGCGAAGAACTGCTGGCGATTGCGCCGGTCTTCGGTCAGAAGCCGTACTTCCTGAGCGATGAGTTCAGCCTGGTCGATTGCTATCTTGCTCCGCTGCTGTGGCGTCTGCCGCAACTGGGCATCGAGTTCAGCGGCCCGGGTGCGAAAGAGCTGAAAGGCTATATGACCCGCGTCTTTGAGCGTGACTCTTTCCTTGCTTCTTTAACTGAAGCAGAACGTGAAATGCGTCTGGGCCGGAGTTAA", - "dna_sequence_length": 639, - "functions": [ - "stringent starvation protein A, phage P1 late gene activator, RNAP-associated acid-resistance protein, inactive glutathione S-transferase homolog" - ], - "id": "CDS_3174", - "location": [ - [ - "NC_000913", - 3377420, - "-", - 639 - ] - ], - "md5": "0cfc02d80d6c8ebbba590ea5b86b0b02", - "parent_gene": "", - "protein_md5": "b07f5eb7a050c52d00c36de294a6ba3f", - "protein_translation": "MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLYMHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAPLLWRLPQLGIEFSGPGAKELKGYMTRVFERDSFLASLTEAEREMRLGRS", - "protein_translation_length": 212, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10908" - ], - [ - "gene_synonym", - "ASAP:ABE-0010597" - ], - [ - "gene_synonym", - "ECK3219" - ], - [ - "gene_synonym", - "b3230" - ], - [ - "gene_synonym", - "rpsI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7X3" - ], - [ - "gene_synonym", - "JW3199" - ], - [ - "gene_synonym", - "GeneID:949000" - ], - [ - "gene_synonym", - "GI:16131120" - ], - [ - "gene_synonym", - "NP_417697.1" - ] - ], - "dna_sequence": "ATGGCTGAAAATCAATACTACGGCACTGGTCGCCGCAAAAGTTCCGCAGCTCGCGTTTTCATCAAACCGGGCAACGGTAAAATCGTAATCAACCAACGTTCTCTGGAACAGTACTTCGGTCGTGAAACTGCCCGCATGGTAGTTCGTCAGCCGCTGGAACTGGTCGACATGGTTGAGAAACTGGACCTGTACATCACCGTTAAAGGTGGTGGTATCTCTGGTCAGGCTGGTGCGATCCGTCACGGTATCACCCGCGCTCTGATGGAATACGACGAGTCCCTGCGTTCTGAACTGCGTAAAGCTGGCTTCGTTACTCGTGACGCTCGTCAGGTTGAACGTAAGAAAGTCGGTCTGCGTAAAGCACGTCGTCGTCCGCAGTTCTCCAAACGTTAA", - "dna_sequence_length": 393, - "functions": [ - "30S ribosomal subunit protein S9" - ], - "id": "CDS_3175", - "location": [ - [ - "NC_000913", - 3378207, - "-", - 393 - ] - ], - "md5": "a42fa8756ef9bd6064788b92fefc71dd", - "parent_gene": "", - "protein_md5": "7e83a2f8447b1a959eb026f7a47d4917", - "protein_translation": "MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR", - "protein_translation_length": 130, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3231" - ], - [ - "gene_synonym", - "ECK3220" 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"md5": "037e55f28ec9eeaf23257fa36a8d5cfc", - "parent_gene": "", - "protein_md5": "33e7dc7d11d7b539319895ea6c933e23", - "protein_translation": "MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI", - "protein_translation_length": 142, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010602" - ], - [ - "gene_synonym", - "ECK3221" - ], - [ - "gene_synonym", - "b3232" - ], - [ - "gene_synonym", - "NP_417699.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64612" - ], - [ - "gene_synonym", - "GeneID:947821" - ], - [ - "gene_synonym", - "zapE" - ], - [ - "gene_synonym", - "yhcM" - ], - [ - "gene_synonym", - "EcoGene:EG12819" - ], - [ - "gene_synonym", - "JW3201" - ], - [ - "gene_synonym", - "GI:16131122" - ] - ], - "dna_sequence": "ATGCAAAGCGTTACCCCAACATCGCAATACCTGAAGGCGCTTAATGAAGGCAGCCATCAACCCGACGACGTTCAAAAAGAGGCCGTCAGCCGCCTGGAAATTATTTATCAGGAACTCATCAATAGCACGCCACCAGCCCCCAGGACGAGTGGGCTAATGGCGCGGGTCGGTAAGCTGTGGGGTAAACGCGAAGACACAAAGCATACGCCAGTGCGTGGCTTATATATGTGGGGCGGTGTAGGACGCGGGAAAACCTGGCTGATGGACCTTTTCTATCAAAGCCTGCCGGGAGAGCGGAAACAGCGCCTGCACTTTCACCGTTTTATGCTGCGGGTGCATGAAGAGCTAACTGCCTTACAGGGGCAGACCGATCCGCTGGAAATTATTGCCGATCGCTTTAAAGCCGAAACTGACGTGCTCTGTTTTGACGAATTTTTTGTTTCTGATATTACCGATGCCATGCTACTTGGCGGTCTGATGAAAGCCCTGTTCGCTCGCGGTATTACCCTGGTAGCGACGTCAAATATTCCGCCGGATGAACTTTATCGAAATGGCCTGCAACGTGCGCGTTTTCTGCCTGCAATCGATGCCATTAAACAGCATTGTGATGTAATGAACGTGGACGCTGGTGTTGATTATCGTCTGCGTACACTCACTCAGGCGCATCTGTGGCTTTCGCCACTTCACGATGAAACCCGGGCGCAAATGGATAAACTATGGTTGGCGCTGGCGGGGGGGAAACGAGAAAATTCACCGACGTTAGAAATCAACCATCGGCCATTAGCAACAATGGGCGTCGAGAACCAGACGCTGGCGGTCTCTTTTACTACGCTGTGCGTCGACGCCCGCAGTCAGCATGACTATATTGCGCTCTCACGTCTCTTTCATACGGTCATGTTGTTTGATGTACCAGTTATGACGCGGTTGATGGAGAGCGAAGCGCGGCGCTTTATTGCGCTGGTGGATGAGTTTTACGAGCGCCATGTCAAATTAGTGGTGAGTGCAGAAGTGCCGCTGTATGAAATTTATCAGGGCGATCGGCTGAAGTTTGAGTTCCAGCGTTGCCTGTCACGTCTGCAAGAGATGCAAAGCGAAGAGTATCTGAAGCGCGAGCATTTGGCGGGTTAA", 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"gene_synonym", - "EcoGene:EG12614" - ], - [ - "gene_synonym", - "JW5539" - ], - [ - "gene_synonym", - "yhcB" - ], - [ - "gene_synonym", - "NP_417700.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0010606" - ] - ], - "dna_sequence": "ATGACCTGGGAATATGCGCTAATTGGGTTAGTCGTCGGCATCATTATTGGTGCTGTGGCCATGCGTTTTGGTAATCGTAAACTACGCCAGCAACAGGCGTTGCAGTACGAACTGGAAAAGAATAAAGCTGAACTGGACGAGTATCGCGAAGAGCTGGTTAGCCACTTTGCCCGCAGCGCGGAATTACTGGATACCATGGCGCACGACTATCGCCAGCTGTATCAGCACATGGCAAAAAGCTCCAGCAGCCTGCTGCCGGAACTGTCTGCTGAAGCAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAA", - "dna_sequence_length": 399, - "functions": [ - "DUF1043 family inner membrane-anchored protein" - ], - "id": "CDS_3178", - "location": [ - [ - "NC_000913", - 3380191, - "+", - 399 - ] - ], - "md5": "eae448ea721d8aabf19b9ff460fbeab2", - "parent_gene": "", - "protein_md5": "0d552860d03d7427ddfb58c6c723f3b7", - "protein_translation": "MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELDEYREELVSHFARSAELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAESEASNDQAPVQMPRDYSEGASGLLRTGAKRD", - "protein_translation_length": 132, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947812" - ], - [ - "gene_synonym", - "degQ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39099" - ], - [ - "gene_synonym", - "ECK3223" - ], - [ - "gene_synonym", - "b3234" - ], - [ - "gene_synonym", - "GI:16131124" - ], - [ - "gene_synonym", - "EcoGene:EG12612" - ], - [ - "gene_synonym", - "hhoA" - ], - [ - "gene_synonym", - "ASAP:ABE-0010609" - ], - [ - "gene_synonym", - "NP_417701.1" - ], - [ - "gene_synonym", - "JW3203" - ] - ], - "dna_sequence": "ATGAAAAAACAAACCCAGCTGTTGAGTGCATTAGCGTTAAGTGTCGGGTTAACTCTCTCGGCGTCATTTCAGGCCGTCGCGTCGATTCCAGGCCAGGTTGCCGATCAGGCCCCTCTCCCCAGTCTGGCTCCAATGCTGGAAAAAGTGCTTCCGGCAGTGGTGAGCGTACGGGTGGAAGGAACGGCCAGTCAGGGACAGAAAATCCCGGAAGAATTCAAAAAGTTTTTTGGTGATGATTTACCGGATCAACCTGCACAACCCTTCGAAGGTTTAGGCTCCGGTGTCATCATCAACGCCAGTAAAGGCTATGTGCTGACCAACAACCATGTGATTAATCAGGCACAGAAAATCAGTATTCAGCTCAATGATGGGCGCGAGTTTGATGCAAAACTGATTGGTAGCGATGACCAGAGCGATATCGCCCTGTTACAAATTCAAAACCCGAGCAAATTAACGCAAATCGCTATTGCCGACTCCGATAAATTGCGCGTCGGTGATTTTGCCGTAGCGGTCGGTAACCCATTTGGCCTTGGGCAAACCGCCACCTCTGGCATTGTTTCCGCATTAGGCCGCAGCGGGTTGAATCTTGAAGGTCTGGAAAACTTTATCCAGACAGATGCTTCCATTAACCGCGGTAACTCCGGCGGTGCACTATTAAACCTTAACGGTGAGTTAATTGGCATCAACACTGCAATCCTTGCGCCTGGCGGCGGGAGCGTCGGGATTGGATTTGCCATCCCCAGTAATATGGCGCGAACACTGGCGCAGCAGCTTATCGACTTTGGTGAAATCAAACGCGGTTTGTTAGGCATCAAAGGCACCGAGATGAGTGCCGATATCGCCAAAGCCTTCAACCTTGACGTGCAGCGTGGCGCGTTTGTCAGCGAAGTGTTGCCAGGTTCTGGCTCGGCAAAAGCGGGCGTCAAAGCGGGCGATATTATTACCAGCCTCAACGGCAAACCGCTGAATAGCTTTGCTGAGTTGCGCTCTCGTATCGCGACCACCGAGCCGGGCACGAAAGTGAAGCTTGGCCTGCTGCGTAACGGCAAACCACTGGAAGTAGAAGTGACGCTCGATACCAGCACCTCTTCGTCGGCCAGCGCTGAAATGATCACGCCAGCGCTGGAAGGTGCAACGTTGAGCGATGGTCAGCTAAAAGATGGCGGCAAAGGTATTAAAATCGATGAAGTTGTCAAAGGAAGCCCAGCTGCTCAGGCTGGCTTGCAAAAAGACGATGTGATCATTGGCGTCAACCGCGATCGGGTGAACTCGATTGCTGAAATGCGTAAAGTGCTGGCGGCAAAACCGGCCATCATCGCCCTGCAAATTGTACGCGGCAATGAAAGCATCTATCTGCTGATGCGTTAA", 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- "gene_synonym", - "b3235" - ], - [ - "gene_synonym", - "ECK3224" - ], - [ - "gene_synonym", - "htrH" - ], - [ - "gene_synonym", - "ASAP:ABE-0010611" - ], - [ - "gene_synonym", - "EcoGene:EG11652" - ], - [ - "gene_synonym", - "GeneID:947865" - ], - [ - "gene_synonym", - "JW3204" - ], - [ - "gene_synonym", - "GI:16131125" - ], - [ - "gene_synonym", - "hhoB" - ] - ], - "dna_sequence": "ATGTTTGTGAAGCTCTTACGTTCCGTTGCGATTGGATTAATTGTCGGCGCTATTCTGCTGGTTGCCATGCCTTCGCTGCGCAGCCTTAACCCGCTTTCCACTCCGCAATTTGACAGTACCGATGAGACGCCTGCCAGCTATAATCTGGCGGTTCGCCGCGCCGCGCCAGCGGTGGTTAACGTTTACAACCGTGGTTTGAACACCAACTCTCACAACCAGCTTGAGATCCGCACCCTGGGATCCGGTGTAATCATGGATCAACGCGGTTATATCATCACCAATAAACACGTCATCAACGACGCCGATCAGATCATCGTCGCCTTACAGGATGGACGTGTATTTGAAGCATTGCTGGTGGGATCTGACTCTCTAACCGATCTGGCGGTACTTAAAATTAATGCCACTGGCGGTTTACCTACCATTCCAATTAATGCACGTCGCGTACCGCACATTGGCGACGTAGTACTGGCGATCGGTAACCCGTACAACCTCGGGCAGACCATTACCCAGGGGATTATTAGTGCCACGGGTCGAATCGGTCTGAACCCGACCGGGCGGCAAAACTTCCTCCAAACCGATGCTTCCATTAACCACGGTAACTCTGGCGGCGCGCTGGTGAACTCGCTGGGCGAACTGATGGGCATTAATACGCTGTCGTTTGATAAGAGTAACGATGGCGAAACGCCGGAAGGTATCGGCTTTGCGATTCCTTTCCAGTTAGCAACCAAAATTATGGATAAGCTGATCCGCGATGGTCGCGTGATCCGCGGCTACATTGGTATCGGCGGACGTGAGATCGCACCACTGCACGCGCAGGGCGGTGGTATAGATCAACTGCAAGGGATCGTGGTTAATGAAGTGTCACCTGACGGCCCGGCGGCGAATGCGGGTATTCAGGTCAACGATCTGATTATTTCGGTGGATAACAAACCGGCCATCTCTGCTCTGGAGACGATGGATCAGGTGGCGGAAATTCGCCCTGGTTCGGTGATCCCTGTAGTAGTGATGCGTGATGATAAGCAGTTAACGCTGCAGGTCACCATTCAGGAATATCCGGCAACCAATTAA", 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- ], - [ - "gene_synonym", - "ASAP:ABE-0010613" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P61889" - ], - [ - "gene_synonym", - "JW3205" - ], - [ - "gene_synonym", - "GI:16131126" - ] - ], - "dna_sequence": "ATGAAAGTCGCAGTCCTCGGCGCTGCTGGCGGTATTGGCCAGGCGCTTGCACTACTGTTAAAAACCCAACTGCCTTCAGGTTCAGAACTCTCTCTGTATGATATCGCTCCAGTGACTCCCGGTGTGGCTGTCGATCTGAGCCATATCCCTACTGCTGTGAAAATCAAAGGTTTTTCTGGTGAAGATGCGACTCCGGCGCTGGAAGGCGCAGATGTCGTTCTTATCTCTGCAGGCGTAGCGCGTAAACCGGGTATGGATCGTTCCGACCTGTTTAACGTTAACGCCGGCATCGTGAAAAACCTGGTACAGCAAGTTGCGAAAACCTGCCCGAAAGCGTGCATTGGTATTATCACTAACCCGGTTAACACCACAGTTGCAATTGCTGCTGAAGTGCTGAAAAAAGCCGGTGTTTATGACAAAAACAAACTGTTCGGCGTTACCACGCTGGATATCATTCGTTCCAACACCTTTGTTGCGGAACTGAAAGGCAAACAGCCAGGCGAAGTTGAAGTGCCGGTTATTGGCGGTCACTCTGGTGTTACCATTCTGCCGCTGCTGTCACAGGTTCCTGGCGTTAGTTTTACCGAGCAGGAAGTGGCTGATCTGACCAAACGCATCCAGAACGCGGGTACTGAAGTGGTTGAAGCGAAGGCCGGTGGCGGGTCTGCAACCCTGTCTATGGGCCAGGCAGCTGCACGTTTTGGTCTGTCTCTGGTTCGTGCACTGCAGGGCGAACAAGGCGTTGTCGAATGTGCCTACGTTGAAGGCGACGGTCAGTACGCCCGTTTCTTCTCTCAACCGCTGCTGCTGGGTAAAAACGGCGTGGAAGAGCGTAAATCTATCGGTACCCTGAGCGCATTTGAACAGAACGCGCTGGAAGGTATGCTGGATACGCTGAAGAAAGATATCGCCCTGGGCGAAGAGTTCGTTAATAAGTAA", - "dna_sequence_length": 939, - "functions": [ - "malate dehydrogenase, NAD(P)-binding" - ], - "id": "CDS_3181", - "location": [ - [ - "NC_000913", - 3384268, - "-", - 939 - ] - ], - "md5": "72346576e32720b274cc72c9b0afc089", - "parent_gene": "", - "protein_md5": "e900d4236746abfdd6436dab2615ca4b", - "protein_translation": "MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK", - "protein_translation_length": 312, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6D0" - ], - [ - "gene_synonym", - "EcoGene:EG10070" - ], - [ - "gene_synonym", - "Rarg" - ], - [ - "gene_synonym", - "argR" - ], - [ - "gene_synonym", - "b3237" - ], - [ - "gene_synonym", - "ECK3226" - ], - [ - "gene_synonym", - "NP_417704.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010620" - ], - [ - "gene_synonym", - "xerA" - ], - [ - "gene_synonym", - "GI:16131127" - ], - [ - "gene_synonym", - "JW3206" - ], - [ - "gene_synonym", - "GeneID:947861" - ] - ], - "dna_sequence": "ATGCGAAGCTCGGCTAAGCAAGAAGAACTAGTTAAAGCATTTAAAGCATTACTTAAAGAAGAGAAATTTAGCTCCCAGGGCGAAATCGTCGCCGCGTTGCAGGAGCAAGGCTTTGACAATATTAATCAGTCTAAAGTCTCGCGGATGTTGACCAAGTTTGGTGCTGTACGTACACGCAATGCCAAAATGGAAATGGTTTACTGCCTGCCAGCTGAACTGGGTGTACCAACCACCTCCAGTCCATTGAAGAATCTGGTGCTGGATATCGACTACAACGATGCAGTTGTCGTGATTCATACCAGCCCTGGCGCGGCGCAGTTAATTGCTCGCCTGCTGGACTCACTGGGCAAAGCAGAAGGTATTCTGGGCACCATCGCTGGCGATGACACCATCTTTACCACCCCTGCTAACGGTTTCACAGTCAAAGACCTGTACGAAGCGATTTTAGAGCTGTTCGACCAGGAGCTTTAA", - "dna_sequence_length": 471, - "functions": [ - "l-arginine-responsive arginine metabolism regulon transcriptional regulator" - ], - "id": "CDS_3182", - "location": [ - [ - "NC_000913", - 3384703, - "+", - 471 - ] - ], - "md5": "616b1511d78b0991e88c913bf320f24d", - "parent_gene": "", - "protein_md5": "91d0535ec00ce932aac0c98e8a6bf9df", - "protein_translation": "MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSPGAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL", - "protein_translation_length": 156, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12820" - ], - [ - "gene_synonym", - "b3238" - ], - [ - "gene_synonym", - "GI:90111561" - ], - [ - "gene_synonym", - "JW5540" - ], - [ - "gene_synonym", - "ECK3227" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64614" - ], - [ - "gene_synonym", - "yhcN" - ], - [ - "gene_synonym", - "ASAP:ABE-0010623" - ], - [ - "gene_synonym", - "NP_417705.2" - ], - [ - "gene_synonym", - "GeneID:947835" - ] - ], - "dna_sequence": "ATGAAAATCAAAACCACTGTTGCTGCATTAAGCGTACTTTCTGTTCTCTCTTTCGGTGCATTCGCTGCCGACTCCATTGATGCTGCACAAGCACAAAATCGTGAAGCAATCGGGACCGTATCCGTAAGTGGTGTGGCGTCTTCGCCAATGGATATGCGTGAAATGCTGAACAAAAAAGCGGAAGAGAAAGGCGCAACGGCCTACCAGATTACTGAAGCTCGTAGCGGTGACACCTGGCACGCTACGGCTGAACTGTACAAATAA", - "dna_sequence_length": 264, - "functions": [ - "cadmium and peroxide resistance protein, stress-induced" - ], - "id": "CDS_3183", - "location": [ - [ - "NC_000913", - 3385538, - "+", - 264 - ] - ], - "md5": "c56040199fd240ddabbfc3345bb223b4", - "parent_gene": "", - "protein_md5": "1e53a06f337176a1b4bd9e96a8ebbd36", - "protein_translation": "MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSGVASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK", - "protein_translation_length": 87, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3239" - ], - [ - "gene_synonym", - "ECK3228" - ], - [ - "gene_synonym", - "EcoGene:EG12821" - ], - [ - "gene_synonym", - "GI:16131129" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64616" - ], - [ - "gene_synonym", - "JW3208" - ], - [ - "gene_synonym", - "NP_417706.1" - ], - [ - "gene_synonym", - "GeneID:947830" - ], - [ - "gene_synonym", - "ASAP:ABE-0010625" - ], - [ - "gene_synonym", - "yhcO" - ] - ], - "dna_sequence": "ATGAATATTTATACCTTTGATTTTGATGAGATTGAGAGTCAGGAGGATTTTTATCGTGACTTTAGCCAAACCTTTGGTCTGGCGAAAGATAAGGTACGCGATCTCGACTCACTATGGGATGTGTTAATGAACGATGTCCTGCCGCTACCACTTGAGATTGAATTTGTTCATCTGGGAGAGAAAACGCGTCGCCGTTTTGGCGCGTTAATATTGCTGTTTGATGAGGCAGAGGAAGAGCTGGAAGGGCATTTGCGTTTTAATGTTCGTCATTAG", - "dna_sequence_length": 273, - "functions": [ - "putative barnase inhibitor" - ], - "id": "CDS_3184", - "location": [ - [ - "NC_000913", - 3386129, - "-", - 273 - ] - ], - "md5": "5e323afff5d208b2fa9ad3fd59fdac8b", - "parent_gene": "", - "protein_md5": "1062621ed99d416d9d264916ad240b05", - "protein_translation": "MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMNDVLPLPLEIEFVHLGEKTRRRFGALILLFDEAEEELEGHLRFNVRH", - "protein_translation_length": 90, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3229" - ], - [ - "gene_synonym", - "EcoGene:EG12822" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46481" - ], - [ - "gene_synonym", - "yhcP" - ], - [ - "gene_synonym", - "b3240" - ], - [ - "gene_synonym", - "NP_417707.1" - ], - [ - "gene_synonym", - "aaeB" - ], - [ - "gene_synonym", - "ASAP:ABE-0010629" - ], - [ - "gene_synonym", - "JW3209" - ], - [ - "gene_synonym", - "GeneID:947747" - ], - [ - "gene_synonym", - "GI:16131130" - ] - ], - "dna_sequence": "ATGGGTATTTTCTCCATTGCTAACCAACATATTCGCTTTGCGGTAAAACTGGCGACCGCCATTGTACTGGCGCTGTTTGTTGGCTTTCACTTCCAGCTGGAAACGCCACGCTGGGCGGTACTGACAGCGGCGATTGTTGCCGCCGGTACGGCCTTTGCTGCGGGAGGTGAACCGTATTCTGGCGCTATTCGCTATCGTGGCTTTTTGCGCATCATCGGCACATTTATTGGCTGTATTGCCGGACTGGTGATCATCATTGCGATGATCCGCGCACCATTATTGATGATTCTGGTGTGCTGTATCTGGGCCGGTTTTTGTACCTGGATATCCTCGCTGGTACGAATAGAAAACTCGTATGCGTGGGGGCTGGCCGGTTATACCGCGCTGATCATTGTGATCACCATTCAGCCGGAACCATTGCTTACGCCGCAGTTTGCCGTCGAACGTTGTAGCGAGATCGTTATCGGTATTGTGTGTGCGATTATGGCGGATTTGCTCTTTTCTCCGCGATCGATCAAACAAGAAGTGGATCGAGAGCTGGAAAGTTTGCTGGTCGCGCAATATCAATTAATGCAACTCTGTATCAAGCATGGCGATGGTGAAGTTGTCGATAAAGCCTGGGGCGACCTGGTGCGACGCACCACGGCGCTACAAGGCATGCGCAGCAACCTGAATATGGAATCTTCCCGCTGGGCGCGGGCCAATCGACGTTTAAAAGCGATCAATACGCTATCGCTGACGCTGATTACCCAATCCTGCGAAACTTATCTTATTCAGAATACGCGCCCGGAATTGATCACTGATACTTTCCGCGAATTTTTTGACACGCCGGTAGAAACCGCGCAGGACGTCCACAAGCAGCTCAAACGCCTGCGGAGAGTTATCGCCTGGACCGGGGAACGGGAAACGCCTGTCACCATTTATAGCTGGGTCGCGGCGGCAACGCGTTATCAGCTTCTCAAGCGCGGCGTTATCAGTAACACAAAAATCAACGCCACCGAAGAAGAGATCCTGCAAGGCGAACCGGAAGTAAAAGTAGAGTCAGCCGAACGTCATCATGCAATGGTTAACTTCTGGCGAACCACACTTTCCTGCATTCTGGGCACGCTTTTCTGGCTGTGGACGGGCTGGACTTCCGGCAGTGGTGCAATGGTGATGATTGCGGTAGTGACGTCACTGGCAATGCGTTTGCCGAATCCACGCATGGTGGCGATCGACTTTATCTACGGGACGCTGGCCGCGCTGCCGTTAGGGCTGCTCTACTTTTTGGTGATTATCCCTAATACCCAACAGAGCATGTTGCTGCTGTGCATTAGCCTGGCAGTGCTGGGATTCTTCCTCGGTATAGAAGTACAGAAACGGCGACTGGGCTCGATGGGGGCACTGGCCAGCACCATAAATATTATCGTGCTGGATAACCCGATGACTTTCCATTTCAGTCAGTTTCTCGACAGCGCATTAGGGCAAATCGTCGGCTGTGTGCTCGCGTTCACCGTTATTTTGCTGGTGCGGGATAAATCGCGCGACAGGACCGGACGTGTACTGCTTAATCAGTTTGTTTCTGCCGCTGTTTCCGCGATGACTACCAATGTGGCACGTCGTAAAGAGAACCACCTCCCGGCACTTTATCAGCAGCTGTTTTTGCTGATGAATAAGTTCCCAGGGGATTTGCCGAAATTTCGCCTGGCGCTGACGATGATTATCGCGCACCAGCGCCTGCGTGATGCACCGATCCCGGTTAACGAGGATTTATCGGCGTTTCACCGACAAATGCGCCGCACAGCAGACCATGTGATATCTGCCCGTAGCGATGATAAACGTCGTCGGTACTTTGGCCAGTTGCTGGAAGAACTGGAAATCTACCAGGAAAAGCTACGCATCTGGCAAGCGCCACCGCAGGTGACGGAACCGGTAAATCGGCTGGCGGGGATGCTCCATAAGTATCAACATGCGTTGACCGATAGTTAA", 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"protein_translation_length": 655, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947748" - ], - [ - "gene_synonym", - "EcoGene:EG12823" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46482" - ], - [ - "gene_synonym", - "NP_417708.1" - ], - [ - "gene_synonym", - "yhcQ" - ], - [ - "gene_synonym", - "aaeA" - ], - [ - "gene_synonym", - "b3241" - ], - [ - "gene_synonym", - "ECK3230" - ], - [ - "gene_synonym", - "ASAP:ABE-0010631" - ], - [ - "gene_synonym", - "JW3210" - ], - [ - "gene_synonym", - "GI:16131131" - ] - ], - "dna_sequence": "GTGAAAACACTAATAAGAAAATTCTCCCGTACGGCCATCACGGTCGTATTAGTCATTCTGGCCTTCATCGCAATTTTTAATGCCTGGGTCTATTACACCGAATCCCCCTGGACGCGTGACGCGCGCTTTAGCGCTGACGTCGTTGCGATCGCGCCGGACGTTTCTGGACTCATTACCCAGGTGAATGTTCATGATAACCAGCTGGTGAAAAAAGGACAGATACTGTTCACCATCGACCAGCCGCGCTATCAAAAGGCGCTTGAGGAAGCGCAAGCCGATGTTGCTTATTATCAGGTACTGGCACAGGAGAAACGCCAGGAGGCCGGACGTCGTAACCGTCTCGGTGTGCAGGCGATGTCTCGCGAAGAGATCGACCAGGCCAACAACGTACTACAAACGGTTCTGCATCAGTTAGCGAAAGCGCAGGCGACCCGCGATCTGGCAAAACTGGATCTTGAACGCACGGTGATCCGCGCGCCAGCAGATGGCTGGGTGACCAACCTCAACGTCTATACCGGTGAGTTTATTACTCGAGGATCAACGGCGGTTGCGCTGGTGAAACAGAACTCCTTCTATGTACTGGCCTATATGGAAGAAACTAAGCTGGAAGGGGTGCGTCCGGGGTATCGTGCAGAGATCACGCCGCTTGGCAGTAACAAAGTGCTGAAAGGGACTGTTGATAGTGTTGCCGCAGGGGTCACCAACGCCAGCAGCACGCGTGACGACAAAGGGATGGCGACTATAGACTCTAACCTTGAATGGGTGCGTCTTGCGCAACGTGTTCCGGTTCGTATTCGTCTCGACAACCAGCAAGAGAACATCTGGCCTGCGGGCACCACTGCTACAGTGGTGGTCACTGGCAAACAAGATCGCGACGAAAGCCAGGATTCGTTCTTCCGTAAAATGGCCCATCGCCTGCGTGAGTTTGGTTAA", - "dna_sequence_length": 933, - "functions": [ - "p-hydroxybenzoic acid efflux system component" - ], - "id": "CDS_3186", - "location": [ - [ - "NC_000913", - 3389126, - "-", - 933 - ] - ], - "md5": "5bf05869247504daaefee677bd4d1fed", - "parent_gene": "", - "protein_md5": "e7594110cb9a59b8d0ba2ce9763c8fcd", - "protein_translation": "MKTLIRKFSRTAITVVLVILAFIAIFNAWVYYTESPWTRDARFSADVVAIAPDVSGLITQVNVHDNQLVKKGQILFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMSREEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYTGEFITRGSTAVALVKQNSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLDNQQENIWPAGTTATVVVTGKQDRDESQDSFFRKMAHRLREFG", - "protein_translation_length": 310, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417709.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46478" - ], - [ - "gene_synonym", - "EcoGene:EG12824" - ], - [ - "gene_synonym", - "GI:90111562" - ], - [ - "gene_synonym", - "yhcR" - ], - [ - "gene_synonym", - "JW5541" - ], - [ - "gene_synonym", - "b3242" - ], - [ - "gene_synonym", - "ASAP:ABE-0010636" - ], - [ - "gene_synonym", - "GeneID:947751" - ], - [ - "gene_synonym", - "aaeX" - ], - [ - "gene_synonym", - "ECK3231" - ] - ], - "dna_sequence": "ATGAGTCTGTTTCCCGTTATCGTGGTGTTTGGGCTGTCCTTCCCACCGATATTTTTTGAATTGCTTTTATCACTGGCGATTTTCTGGCTGGTGCGCCGGGTACTTGTGCCAACAGGTATCTACGACTTTGTCTGGCATCCGGCGTTGTTCAACACCGCGCTCTATTGCTGCTTGTTTTATTTGATATCGCGACTGTTCGTTTGA", - "dna_sequence_length": 204, - "functions": [ - "DUF1656 family putative inner membrane efflux pump associated protein" - ], - "id": "CDS_3187", - "location": [ - [ - "NC_000913", - 3389337, - "-", - 204 - ] - ], - "md5": "c0d22ec17f10f8c1a9a1c971015ed7ed", - "parent_gene": "", - "protein_md5": "e6807ec5cc83f681ac62c68c1bc8ef12", - "protein_translation": "MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRVLVPTGIYDFVWHPALFNTALYCCLFYLISRLFV", - "protein_translation_length": 67, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947760" - ], - [ - "gene_synonym", - "EcoGene:EG12825" - ], - [ - "gene_synonym", - "yhcS" - ], - [ - "gene_synonym", - "qseA" - ], - [ - "gene_synonym", - "b3243" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67662" - ], - [ - "gene_synonym", - "ECK3232" - ], - [ - "gene_synonym", - "NP_417710.1" - ], - [ - "gene_synonym", - "JW3212" - ], - [ - "gene_synonym", - "ASAP:ABE-0010639" - ], - [ - "gene_synonym", - "GI:16131133" - ], - [ - "gene_synonym", - "aaeR" - ] - ], - "dna_sequence": "ATGGAACGACTAAAACGCATGTCGGTGTTTGCCAAAGTAGTTGAATTTGGCTCTTTTACCGCCGCCGCCAGACAGCTACAGATGAGCGTTTCGTCCATCAGTCAGACGGTATCAAAACTGGAAGATGAGTTGCAGGTAAAGCTGTTAAACCGTAGCACACGCAGCATTGGCCTGACCGAAGCCGGTAGAATTTACTACCAGGGCTGCCGTCGTATGCTTCATGAAGTGCAGGATGTTCATGAGCAACTGTATGCCTTCAATAACACCCCCATCGGGACGCTACGCATTGGCTGTTCTTCAACTATGGCACAAAATGTTCTCGCCGGGCTGACAGCCAAAATGCTGAAAGAATACCCAGGTTTGAGCGTCAATCTGGTTACCGGAATTCCAGCCCCCGACCTGATTGCCGACGGTCTGGATGTGGTGATCCGCGTCGGCGCGTTGCAGGATTCCAGCCTGTTTTCCCGCCGTCTGGGCGCGATGCCAATGGTGGTGTGCGCCGCGAAAAGCTATCTCACACAATACGGCATACCGGAAAAACCCGCCGATTTGAGTAGTCATTCATGGCTTGAATACAGCGTGCGGCCCGACAATGAATTTGAACTGATCGCACCGGAAGGGATCTCGACTCGCCTGATCCCACAAGGAAGATTTGTGACTAATGATCCGATGACGCTGGTGCGCTGGCTGACGGCGGGTGCCGGGATCGCCTACGTGCCGCTGATGTGGGTGATCAACGAGATCAATCGTGGGGAGCTGGAGATCCTGCTGCCGCGTTACCAGTCAGATCCACGCCCGGTTTATGCGTTATATACCGAAAAAGATAAGCTGCCGCTGAAGGTACAGGTCGTGATCAACTCGCTGACGGATTATTTTGTTGAGGTCGGTAAATTGTTTCAGGAGATGCACGGGCGCGGGAAAGAGAAGTAA", - "dna_sequence_length": 930, - "functions": [ - "transcriptional regulator for aaeXAB operon" - ], - "id": "CDS_3188", - "location": [ - [ - "NC_000913", - 3389520, - "+", - 930 - ] - ], - "md5": "b2c3f716805ddadbb924e37e86bc280b", - "parent_gene": "", - "protein_md5": "da89535fcc37ea69c1a9f736e4b9291c", - "protein_translation": "MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDELQVKLLNRSTRSIGLTEAGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTMAQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGAMPMVVCAAKSYLTQYGIPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRFVTNDPMTLVRWLTAGAGIAYVPLMWVINEINRGELEILLPRYQSDPRPVYALYTEKDKLPLKVQVVINSLTDYFVEVGKLFQEMHGRGKEK", - "protein_translation_length": 309, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947749" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGG8" - ], - [ - "gene_synonym", - "EcoGene:EG12826" - ], - [ - "gene_synonym", - "b3244" - ], - [ - "gene_synonym", - "yhdO" - ], - [ - "gene_synonym", - "NP_417711.1" - ], - [ - "gene_synonym", - "ECK3233" - ], - [ - "gene_synonym", - "JW3213" - ], - [ - "gene_synonym", - "GI:16131134" - ], - [ - "gene_synonym", - "tldD" - ], - [ - "gene_synonym", - "ASAP:ABE-0010642" - ] - ], - "dna_sequence": "ATGAGTCTTAACCTGGTAAGTGAACAATTGCTAGCGGCGAACGGCCTGAAACATCAGGACTTGTTCGCGATCCTCGGTCAACTGGCCGAACGTCGCCTTGATTATGGCGATCTCTATTTTCAGTCGAGCTATCACGAATCCTGGGTTTTAGAAGACCGCATTATTAAAGATGGTTCTTACAACATCGATCAGGGCGTTGGTGTGCGTGCAATCAGCGGTGAAAAAACCGGATTTGCTTACGCTGACCAAATCAGCCTGCTGGCGCTGGAACAGAGTGCGCAAGCGGCGCGCACCATCGTCCGTGATAGTGGTGATGGTAAAGTACAGACGCTGGGCGCGGTAGAGCATAGCCCGTTGTATACCTCGGTAGATCCGCTGCAAAGCATGAGCCGTGAAGAGAAGCTGGATATCCTGCGTCGCGTCGATAAGGTTGCCCGCGAAGCGGACAAGCGCGTACAGGAAGTGACTGCCAGCCTCAGTGGTGTCTATGAATTAATTTTGGTTGCGGCCACCGACGGCACGCTAGCGGCGGATGTCCGTCCGCTGGTGCGTCTTTCCGTGAGCGTTCTCGTCGAAGAAGATGGCAAACGCGAACGCGGTGCCAGTGGCGGCGGCGGTCGTTTTGGTTATGAATTCTTCCTTGCCGATCTCGACGGCGAAGTCCGTGCGGATGCATGGGCAAAAGAAGCAGTGCGTATGGCGCTGGTCAATCTTTCTGCCGTTGCTGCACCAGCGGGCACCATGCCGGTAGTACTTGGCGCAGGTTGGCCGGGCGTGCTGTTGCATGAAGCGGTTGGTCACGGTCTGGAAGGCGACTTCAACCGCCGTGGCACTTCAGTATTTAGTGGACAGGTCGGGGAGCTGGTGGCTTCAGAACTGTGTACCGTGGTTGATGATGGCACGATGGTCGATCGCCGAGGTTCGGTGGCGATTGATGACGAAGGTACGCCAGGCCAGTACAACGTGCTGATTGAGAACGGCATTCTGAAAGGCTACATGCAGGATAAACTCAACGCGCGTTTGATGGGGATGACGCCGACTGGCAACGGTCGCCGTGAATCCTACGCCCATCTGCCCATGCCGCGTATGACCAACACCTATATGCTGCCGGGTAAATCGACCCCGCAGGAAATTATTGAATCCGTTGAGTACGGTATCTATGCACCGAACTTTGGTGGCGGTCAGGTGGATATCACCTCCGGCAAATTCGTTTTCTCCACTTCAGAAGCATATCTGATTGAAAACGGTAAAGTAACGAAGCCGGTGAAAGGCGCAACGTTGATTGGTTCCGGTATCGAAACCATGCAGCAGATTTCGATGGTTGGCAACGACCTGAAACTGGATAACGGCGTGGGTGTCTGCGGTAAAGAAGGGCAAAGTTTGCCGGTTGGCGTGGGCCAGCCAACGTTGAAAGTCGATAACCTGACTGTTGGCGGTACTGCGTAA", - "dna_sequence_length": 1446, - "functions": [ - "putative peptidase" - ], - "id": "CDS_3189", - "location": [ - [ - "NC_000913", - 3392028, - "-", - 1446 - ] - ], - "md5": "93715e517e3ee4770bccd97dad433aba", - "parent_gene": "", - "protein_md5": "c638711cbdded3bee890efdd9a8123be", - "protein_translation": "MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTKPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA", - "protein_translation_length": 481, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4472" - ], - [ - "gene_synonym", - "ASAP:ABE-0174102" - ], - [ - "gene_synonym", - "EcoGene:EG12827" - ], - [ - "gene_synonym", - "yhdQ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46474" - ], - [ - "gene_synonym", - "JW5542" - ], - [ - "gene_synonym", - "GeneID:2847740" - ], - [ - "gene_synonym", - "yhdR" - ], - [ - "gene_synonym", - "ECK3234" - ], - [ - "gene_synonym", - "yhdP" - ], - [ - "gene_synonym", - "YP_026208.1" - ], - [ - "gene_synonym", - "GI:49176330" - ] - ], - "dna_sequence": "GTGAGGCGATTGCCGGGGATTTTACTGCTTACTGGAGCCGCGCTCGTTGTGATCGCTGCCCTGCTGGTTAGCGGCCTGCGTATTGCTTTACCGCATCTTGACGCCTGGCGTCCGGAAATCCTCAACAAAATAGAATCCGCGACTGGCATGCCGGTAGAAGCCAGTCAGCTCTCAGCCAGCTGGCAGAATTTTGGCCCGACGCTTGAAGCACACGACATCCGTGCAGAACTAAAAGATGGCGGCGAATTTTCGGTTAAACGCGTTACTCTGGCGCTGGATGTCTGGCAGAGCCTGTTACATATGCGCTGGCAGTTTCGCGACCTCACTTTCTGGCAGCTGCGCTTTCGCACCAACACTCCTATCACCAGCGGTGGTAGTGATGACAGTCTGGAAGCCAGTCACATCAGCGATCTGTTTCTTCGTCAATTTGACCATTTCGATCTTCGCGACAGTGAAGTCAGTTTCCTGACGCCATCCGGTCAGCGCGCCGAGCTGGCGATCCCACAACTCACCTGGCTGAACGATCCACGTCGACACCGTGCGGAAGGCCTGGTAAGCCTCTCCAGCCTTACCGGACAGCACGGCGTGATGCAGGTGCGCATGGATTTGCGCGATGATGAGGGGTTGTTAAGCAATGGTCGCGTCTGGCTCCAGGCGGATGACATCGACCTGAAGCCGTGGCTCGGTAAATGGATGCAGGACAATATTGCGCTGGAAACGGCACAGTTCTCCCTTGAAGGCTGGATGACGATCGACAAAGGCGATGTAACCGGCGGTGACGTCTGGCTGAAACAGGGCGGTGCCAGCTGGTTGGGCGAGAAGCAAACGCATACGCTGTCGGTGGATAATCTGACCGCGCATATTACGCGTGAAAATCCGGGCTGGCAGTTCTCTATTCCCGATACACGGATCACGATGGACGGCAAACCCTGGCCGAGCGGAGCATTGACGCTGGCCTGGATACCGGAACAGGACGTTGGCGGCAAAGACAATAAACGCAGTGACGAACTCCGGATTCGCGCCAGTAATCTGGAGCTGGCAGGCCTGGAGGGCATACGCCCGCTGGCCGCGAAACTTTCACCTGCACTGGGTGATGTTTGGCGCTCCACACAACCGAGCGGCAAGATTAACACTCTGGCGCTGGATATCCCGCTTCAGGCGGCAGACAAGACCCGTTTTCAGGCATCGTGGAGCGATCTGGCCTGGAAGCAATGGAAATTATTACCGGGTGCGGAACACTTCTCCGGGACGCTTTCCGGCAGCGTTGAAAATGGTTTGCTTACCGCGTCGATGAAGCAGGCAAAGATGCCTTACGAAACGGTATTCCGTGCGCCACTAGAAATCGCCGACGGCCAGGCAACTATAAGCTGGCTGAACAATAACAAAGGTTTCCAGCTGGATGGGCGTAATATTGACGTTAAAGCCAAAGCCGTCCATGCGCGCGGCGGTTTTCGTTACCTGCAACCTGCTAACGATGAACCCTGGCTGGGTATTCTGGCTGGCATCAGTACCGATGATGGTTCACAAGCCTGGCGCTATTTCCCGGAAAACTTGATGGGTAAAGACCTGGTTGATTACTTAAGTGGCGCGATTCAGGGCGGTGAAGCGGATAACGCGACGCTGGTTTATGGTGGCAATCCGCAACTCTTCCCCTATAAACACAACGAAGGTCAGTTTGAAGTGCTGGTGCCGCTGCGCAACGCGAAGTTTGCCTTCCAGCCGGACTGGCCTGCATTAACTAACCTTGATATTGAACTGGACTTTATTAACGACGGTTTATGGATGAAAACCGATGGCGTTAATCTGGGCGGCGTGCGCGCGAGTAATCTTACCGCAGTGATCCCTGACTACTCAAAAGAAAAACTGCTGATTGACGCTGACATTAAAGGTCCGGGTAAAGCCGTTGGCCCTTACTTTGATGAGACACCGCTGAAAGATTCTCTGGGTGCGACCCTGCAAGAACTCCAGCTCGACGGCGATGTGAATGCTCGCTTACATCTTGATATCCCGCTGAACGGCGAACTGGTAACCGCGAAAGGTGAAGTGACGCTGCGTAATAACAGTCTGTTTATCAAACCACTCGACAGCACCCTGAAAAATTTGAGCGGTAAATTCAGCTTTATCAATAGCGATCTGCAAAGTGAACCACTGACAGCAAGCTGGTTTAATCAGCCGTTGAACGTGGATTTTTCCACCAAAGAAGGGGCAAAAGCCTACCAGGTAGCGGTAAACCTCAACGGTAACTGGCAACCGGCGAAAACCGGCGTTCTGCCTGAAGCGGTGAACGAAGCATTGAGTGGCAGCGTGGCGTGGGATGGTAAAGTGGGCATTGATCTGCCTTATCATGCTGGTGCGACCTATAACATAGAGCTGAACGGCGATCTAAAGAATGTGAGCAGTCACTTACCTTCACCGTTAGCCAAACCTGCGGGTGAACCACTAGCGGTAAACGTTAAGGTTGATGGCAATCTCAACAGCTTTGAATTAACCGGACAGGCTGGTGCGGATAATCATTTCAATAGCCGCTGGTTGCTCGGTCAAAAGCTGACGCTCGATCGTGCTATTTGGGCGGCAGACAGTAAAACGCTCCCGCCGTTGCCGGAACAAAGTGGCGTTGAACTCAATATGCCGCCGATGAATGGTGCCGAGTGGCTGGCCCTGTTCCAGAAAGGCGCTGCGGAGAGTGTCGGTGGTGCAGCGAGTTTCCCACAACACATAACGTTACGTACGCCTATGTTGTCACTGGGAAATCAGCAATGGAATAACCTGAGTATTGTTTCGCAACCGACGGCAAATGGCACCCTGGTTGAAGCGCAAGGGCGTGAAATCAACGCCACGCTAGCGATGCGTAATAACGCGCCGTGGCTGGCGAATATCAAATATCTTTATTACAACCCGAGCGTGGCGAAAACTCGTGGTGATTCAACGCCGTCATCACCTTTCCCGACAACGGAGCGCATTAACTTCCGTGGCTGGCCGGACGCCCAAATACGATGCACAGAGTGCTGGTTCTGGGGGCAAAAATTCGGTCGCATTGACAGTGATATCACCATTTCTGGCGATACGTTAACGCTGACCAATGGACTGATTGATACTGGTTTCTCGCGGCTTACTGCCGATGGTGAATGGGTTAATAATCCGGGGAATGAACGTACCTCGCTGAAAGGAAAACTGCGCGGGCAGAAAATTGATGCCGCCGCAGAATTTTTTGGTGTCACGACGCCCATACGCCAGTCGTCATTTAATGTGGATTACGATTTACACTGGCGCAAAGCACCCTGGCAGCCAGATGAAGCGACGTTGAATGGCATCATTCATACTCAACTGGGTAAAGGCGAAATTACCGAAATCAATACCGGACATGCCGGGCAATTGCTGCGCTTATTGAGCGTAGATGCCCTGATGCGTAAGCTGCGTTTTGATTTCAGAGACACTTTTGGCGAAGGGTTCTATTTTGACTCCATTCGCAGCACCGCGTGGATTAAAGACGGCGTTATGCACACCGACGACACGCTGGTGGATGGCCTGGAGGCGGATATCGCCATGAAAGGGTCGGTAAATCTGGTACGTCGCGACCTGAATATGGAAGCGGTTGTCGCACCAGAGATTTCTGCGACGGTGGGCGTGGCTGCGGCTTTTGCGGTTAACCCCATTGTTGGCGCGGCAGTGTTTGCCGCCAGTAAAGTGCTGGGGCCGCTGTGGAGCAAAGTCTCCATTTTGCGCTATCACATTTCGGGTCCGCTGGACGATCCGCAAATCAACGAAGTGTTGCGCCAACCGCGTAAAGAAAAAGCGCAATGA", - "dna_sequence_length": 3801, - "functions": [ - "DUF3971-AsmA2 domains protein" - ], - "id": "CDS_3190", - "location": [ - [ - "NC_000913", - 3396258, - "-", - 3801 - ] - ], - "md5": "dfd350653ca0031d987f51e445713b69", - "parent_gene": "", - "protein_md5": "3376b5391c3e7f8dd5f2fa792ff910f6", - "protein_translation": "MRRLPGILLLTGAALVVIAALLVSGLRIALPHLDAWRPEILNKIESATGMPVEASQLSASWQNFGPTLEAHDIRAELKDGGEFSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFSIPDTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRSDELRIRASNLELAGLEGIRPLAAKLSPALGDVWRSTQPSGKINTLALDIPLQAADKTRFQASWSDLAWKQWKLLPGAEHFSGTLSGSVENGLLTASMKQAKMPYETVFRAPLEIADGQATISWLNNNKGFQLDGRNIDVKAKAVHARGGFRYLQPANDEPWLGILAGISTDDGSQAWRYFPENLMGKDLVDYLSGAIQGGEADNATLVYGGNPQLFPYKHNEGQFEVLVPLRNAKFAFQPDWPALTNLDIELDFINDGLWMKTDGVNLGGVRASNLTAVIPDYSKEKLLIDADIKGPGKAVGPYFDETPLKDSLGATLQELQLDGDVNARLHLDIPLNGELVTAKGEVTLRNNSLFIKPLDSTLKNLSGKFSFINSDLQSEPLTASWFNQPLNVDFSTKEGAKAYQVAVNLNGNWQPAKTGVLPEAVNEALSGSVAWDGKVGIDLPYHAGATYNIELNGDLKNVSSHLPSPLAKPAGEPLAVNVKVDGNLNSFELTGQAGADNHFNSRWLLGQKLTLDRAIWAADSKTLPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAASFPQHITLRTPMLSLGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIKYLYYNPSVAKTRGDSTPSSPFPTTERINFRGWPDAQIRCTECWFWGQKFGRIDSDITISGDTLTLTNGLIDTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQSSFNVDYDLHWRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRFDFRDTFGEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVAPEISATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQPRKEKAQ", - "protein_translation_length": 1266, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9J0" - ], - [ - "gene_synonym", - "adhR" - ], - [ - "gene_synonym", - "yhdF" - ], - [ - "gene_synonym", - "GI:90111563" - ], - [ - "gene_synonym", - "b3247" - ], - [ - "gene_synonym", - "rng" - ], - [ - "gene_synonym", - "GeneID:947744" - ], - [ - "gene_synonym", - "ASAP:ABE-0010651" - ], - [ - "gene_synonym", - "ECK3235" - ], - [ - "gene_synonym", - "NP_417713.2" - ], - [ - "gene_synonym", - "EcoGene:EG11299" - ], - [ - "gene_synonym", - "JW3216" - ], - [ - "gene_synonym", - "cafA" - ] - ], - "dna_sequence": "ATGACGGCTGAATTGTTAGTAAACGTAACGCCTTCGGAAACGCGAGTGGCGTATATTGATGGCGGTATTCTGCAGGAAATTCATATTGAACGTGAGGCGCGACGCGGAATAGTAGGCAATATCTACAAGGGTCGTGTAAGTCGTGTACTTCCGGGTATGCAGGCGGCTTTTGTAGATATTGGGCTGGATAAAGCCGCGTTTCTTCATGCATCCGACATCATGCCGCACACCGAATGTGTGGCGGGTGAAGAACAAAAGCAATTCACGGTGCGCGACATCTCGGAACTGGTTCGTCAGGGGCAAGATCTGATGGTGCAGGTGGTGAAAGATCCGCTTGGCACTAAAGGTGCGCGCCTGACCACCGATATCACGCTCCCTTCTCGCTATCTGGTGTTTATGCCAGGGGCTTCTCACGTTGGGGTTTCCCAACGTATTGAAAGCGAATCAGAACGTGAACGCCTGAAAAAAGTGGTCGCAGAGTATTGCGACGAGCAGGGCGGGTTTATCATCCGTACCGCAGCGGAAGGGGTTGGCGAGGCTGAACTGGCCTCCGATGCCGCTTATCTGAAACGCGTCTGGACCAAAGTTATGGAGCGTAAAAAACGCCCGCAGACCCGTTATCAGCTGTACGGCGAACTGGCGCTGGCGCAGCGTGTTCTGCGTGATTTCGCCGATGCCGAACTGGACCGCATTCGCGTTGACTCACGCCTGACTTACGAAGCGTTACTTGAGTTCACCTCGGAGTACATTCCCGAGATGACAAGCAAGCTGGAGCATTACACAGGACGCCAGCCGATTTTCGATCTCTTTGATGTCGAAAACGAAATCCAGCGAGCGCTGGAACGCAAAGTAGAACTGAAATCCGGTGGTTATCTCATTATCGACCAGACCGAAGCGATGACCACCGTGGACATCAATACCGGAGCGTTTGTCGGTCATCGCAATCTGGACGACACCATTTTCAATACCAATATTGAAGCGACGCAGGCTATCGCTCGCCAGTTACGGTTGCGTAATCTGGGCGGGATTATCATTATTGATTTCATCGATATGAATAATGAAGATCACCGCCGCCGAGTGCTGCACTCGCTGGAGCAGGCGTTGAGCAAAGACCGGGTGAAAACCAGCGTTAATGGTTTTTCGGCGCTGGGGCTGGTGGAGATGACGCGTAAACGCACCCGCGAAAGCATTGAGCACGTACTGTGTAACGAATGCCCAACCTGCCACGGTCGCGGAACGGTGAAAACCGTGGAAACGGTATGCTATGAAATCATGCGCGAGATTGTTCGTGTCCACCATGCTTACGACTCCGACCGTTTCCTGGTCTATGCTTCTCCGGCAGTAGCTGAAGCCTTGAAAGGCGAAGAGTCACACTCGCTGGCGGAAGTGGAAATTTTCGTTGGCAAACAGGTTAAAGTACAAATTGAACCGCTCTATAACCAGGAGCAGTTTGACGTCGTAATGATGTAA", - "dna_sequence_length": 1470, - "functions": [ - "ribonuclease G" - ], - "id": "CDS_3191", - "location": [ - [ - "NC_000913", - 3397795, - "-", - 1470 - ] - ], - "md5": "97d56193fc077b8b4a2354b1494090f8", - "parent_gene": "", - "protein_md5": "2d10212c414dea72e3a8a92fa95b0c70", - "protein_translation": "MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAEYCDEQGGFIIRTAAEGVGEAELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQRVLRDFADAELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKRTRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAEALKGEESHSLAEVEIFVGKQVKVQIEPLYNQEQFDVVMM", - "protein_translation_length": 489, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3248" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25536" - ], - [ - "gene_synonym", - "yhdE" - ], - [ - "gene_synonym", - "GeneID:947753" - ], - [ - "gene_synonym", - "ECK3236" - ], - [ - "gene_synonym", - "NP_417714.1" - ], - [ - "gene_synonym", - "maf" - ], - [ - "gene_synonym", - "GI:16131136" - ], - [ - "gene_synonym", - "JW3217" - ], - [ - "gene_synonym", - "EcoGene:EG11298" - ], - [ - "gene_synonym", - "ASAP:ABE-0010653" - ] - ], - "dna_sequence": "ATGACTTCTCTGTATTTAGCTTCCGGTTCTCCGCGTCGTCAGGAGTTACTTGCGCAACTTGGCGTGACCTTTGAACGTATTGTTACGGGCATTGAGGAGCAGCGTCAGCCGCAGGAGAGCGCGCAGCAGTATGTTGTGCGTCTGGCGCGCGAGAAAGCACGGGCAGGTGTCGCGCAAACGGCGAAGGATCTCCCGGTGCTGGGTGCGGATACTATCGTTATCCTGAACGGAGAAGTGCTGGAGAAACCGCGCGACGCAGAGCATGCGGCGCAGATGTTGCGCAAATTATCGGGTCAGACCCATCAGGTGATGACAGCAGTGGCGTTGGCCGACAGCCAGCACATTCTCGATTGCCTGGTGGTCACCGATGTGACTTTCAGAACGTTAACAGACGAAGACATCGCGGGCTATGTCGCCAGCGATGAACCGTTAGATAAAGCAGGTGCATACGGTATTCAGGGGCTGGGTGGCTGTTTTGTCAGGAAGATAAATGGCAGCTATCACGCCGTAGTCGGCTTACCGCTGGTTGAAACGTATGAATTATTAAGTAATTTTAACGCACTGCGTGAGAAAAGGGATAAACATGACGGCTGA", - "dna_sequence_length": 594, - "functions": [ - "dTTP/UTP pyrophosphatase", - "m(5)UTP/m(5)CTP/pseudo-UTP pyrophosphatase" - ], - "id": "CDS_3192", - "location": [ - [ - "NC_000913", - 3398378, - "-", - 594 - ] - ], - "md5": "9dbcf58615b6aaf64cd154f04a10254a", - "parent_gene": "", - "protein_md5": "388c1f1c8f32ff750b138a39fd86c3d7", - "protein_translation": "MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKARAGVAQTAKDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLVVTDVTFRTLTDEDIAGYVASDEPLDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG", - "protein_translation_length": 197, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3249" - ], - [ - "gene_synonym", - "EcoGene:EG10610" - ], - [ - "gene_synonym", - "mreD" - ], - [ - "gene_synonym", - "GeneID:947756" - ], - [ - "gene_synonym", - "ECK3237" - ], - [ - "gene_synonym", - "JW3218" - ], - [ - "gene_synonym", - "NP_417715.1" - ], - [ - "gene_synonym", - "GI:16131137" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABH4" - ], - [ - "gene_synonym", - "ASAP:ABE-0010656" - ] - ], - "dna_sequence": "GTGGCGAGCTATCGTAGCCAGGGACGCTGGGTAATCTGGCTCTCTTTCCTCATTGCGCTGTTGCTGCAAATCATGCCCTGGCCGGATAACCTGATTGTTTTCCGGCCAAACTGGGTGTTACTCATCTTGTTGTATTGGATCCTGGCCTTGCCTCATCGCGTAAATGTGGGCACAGGTTTTGTGATGGGTGCCATACTGGATCTGATCAGCGGCTCGACGCTTGGCGTACGCGTATTGGCGATGAGCATCATTGCTTACCTGGTGGCGCTGAAATACCAGCTTTTCCGCAACCTCGCATTATGGCAGCAGGCGCTGGTCGTCATGTTGCTTTCGCTGGTGGTGGATATTATTGTTTTCTGGGCAGAGTTTTTAGTGATTAACGTCTCTTTCAGACCGGAAGTGTTCTGGAGTAGTGTAGTCAATGGGGTGCTCTGGCCGTGGATTTTCTTGCTGATGCGCAAAGTCCGTCAGCAGTTTGCAGTGCAATAA", - "dna_sequence_length": 489, - "functions": [ - "cell wall structural complex MreBCD transmembrane component MreD" - ], - "id": "CDS_3193", - "location": [ - [ - "NC_000913", - 3398875, - "-", - 489 - ] - ], - "md5": "b8482cc7f0788c87474d4990e72d8a05", - "parent_gene": "", - "protein_md5": "80e07c188c1bb10742350560cbb3a770", - "protein_translation": "MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ", - "protein_translation_length": 162, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947655" - ], - [ - "gene_synonym", - "b3250" - ], - [ - "gene_synonym", - "EcoGene:EG10609" - ], - [ - "gene_synonym", - "mreC" - ], - [ - "gene_synonym", - "JW3219" - ], - [ - "gene_synonym", - "NP_417716.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010658" - ], - [ - "gene_synonym", - "GI:16131138" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16926" - ], - [ - "gene_synonym", - "ECK3238" - ] - ], - "dna_sequence": "ATGAAGCCAATTTTTAGCCGTGGCCCGTCGCTACAGATTCGCCTTATTCTGGCGGTGCTGGTGGCGCTCGGCATTATTATTGCCGACAGCCGCCTGGGGACGTTCAGTCAAATCCGTACTTATATGGATACCGCCGTCAGTCCTTTCTACTTTGTTTCCAATGCTCCTCGTGAATTGCTGGATGGCGTATCGCAGACGCTGGCCTCGCGTGACCAATTAGAACTTGAAAACCGGGCGTTACGTCAGGAACTGTTGCTGAAAAACAGTGAACTGCTGATGCTTGGACAATACAAACAGGAGAACGCGCGTCTGCGCGAGCTGCTGGGTTCCCCGCTGCGTCAGGATGAGCAGAAAATGGTGACTCAGGTTATCTCCACGGTTAACGATCCTTATAGCGATCAAGTTGTTATCGATAAAGGTAGCGTTAATGGCGTTTATGAAGGCCAGCCGGTCATCAGCGACAAAGGTGTTGTTGGTCAGGTGGTGGCCGTCGCTAAACTGACCAGTCGCGTGCTGCTGATTTGTGATGCGACCCACGCGCTGCCAATCCAGGTGCTGCGCAACGATATCCGCGTAATTGCAGCCGGTAACGGTTGTACGGATGATTTGCAGCTTGAGCATCTGCCGGCGAATACGGATATTCGTGTTGGTGATGTGCTGGTGACTTCCGGTCTGGGCGGTCGTTTCCCGGAAGGCTATCCGGTCGCGGTTGTCTCTTCCGTAAAACTCGATACCCAGCGCGCTTATACTGTGATTCAGGCGCGTCCGACTGCAGGGCTGCAACGTTTGCGTTATCTGCTGCTGCTGTGGGGGGCAGATCGTAACGGCGCTAACCCGATGACGCCGGAAGAGGTGCATCGTGTTGCTAATGAACGTCTGATGCAGATGATGCCGCAGGTATTGCCTTCGCCAGACGCGATGGGGCCAAAGTTACCTGAACCGGCAACGGGGATCGCTCAGCCGACTCCGCAGCAACCGGCGACAGGAAATGCAGCTACTGCGCCTGCTGCGCCGACACAGCCTGCTGCTAATCGCTCTCCACAAAGGGCTACGCCGCCGCAAAGTGGTGCTCAACCGCCTGCGCGTGCGCCGGGAGGGCAATAG", 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"NP_417717.2" - ], - [ - "gene_synonym", - "EcoGene:EG10608" - ], - [ - "gene_synonym", - "mreB" - ], - [ - "gene_synonym", - "rodY" - ], - [ - "gene_synonym", - "JW3220" - ], - [ - "gene_synonym", - "mon" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9X4" - ], - [ - "gene_synonym", - "envB" - ], - [ - "gene_synonym", - "ECK3239" - ] - ], - "dna_sequence": "ATGTTGAAAAAATTTCGTGGCATGTTTTCCAATGACTTGTCCATTGACCTGGGTACTGCGAATACCCTCATTTATGTAAAAGGACAAGGCATCGTATTGAATGAGCCTTCCGTGGTGGCCATTCGTCAGGATCGTGCCGGTTCACCGAAAAGCGTAGCTGCAGTAGGTCATGACGCGAAGCAGATGCTGGGCCGTACGCCGGGCAATATTGCTGCCATTCGCCCAATGAAAGACGGCGTTATCGCCGACTTCTTCGTGACTGAAAAAATGCTCCAGCACTTCATCAAACAAGTGCACAGCAACAGCTTTATGCGTCCAAGCCCGCGCGTTCTGGTTTGTGTGCCGGTTGGCGCGACCCAGGTTGAACGCCGCGCAATTCGTGAATCCGCGCAGGGCGCTGGTGCCCGTGAAGTCTTCCTGATTGAAGAACCGATGGCTGCCGCAATTGGTGCTGGCCTGCCGGTTTCTGAAGCGACCGGTTCTATGGTGGTTGATATCGGTGGTGGTACCACTGAAGTTGCTGTTATCTCCTTGAACGGTGTGGTTTACTCCTCTTCTGTGCGCATTGGTGGTGACCGTTTCGACGAAGCTATCATCAACTATGTGCGTCGTAATTACGGTTCTCTGATCGGTGAAGCCACCGCAGAACGTATCAAGCACGAAATCGGTTCGGCTTATCCGGGCGATGAAGTCCGTGAAATCGAAGTTCGTGGCCGTAACCTGGCAGAAGGTGTTCCACGCGGTTTTACCCTGAACTCCAATGAAATCCTCGAAGCACTGCAGGAACCGCTGACCGGTATTGTGAGCGCGGTAATGGTTGCACTGGAACAGTGCCCGCCGGAACTGGCTTCCGACATCTCCGAGCGCGGCATGGTGCTCACCGGTGGTGGCGCACTGCTGCGTAACCTTGACCGTTTGTTAATGGAAGAAACCGGCATTCCAGTCGTTGTTGCTGAAGACCCGCTGACCTGTGTGGCGCGCGGTGGCGGCAAAGCGCTGGAAATGATCGACATGCACGGCGGCGACCTGTTCAGCGAAGAGTAA", - "dna_sequence_length": 1044, - "functions": [ - "cell wall structural complex MreBCD, actin-like component MreB" - ], - "id": "CDS_3195", - "location": [ - [ - "NC_000913", - 3401087, - "-", - 1044 - ] - ], - "md5": "0c294bc295119cd94c001771a0308486", - "parent_gene": "", - "protein_md5": "73d2ba4e5d849d4bc6ef9989dcc9beba", - "protein_translation": "MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQDRAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNSFMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERIKHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALEQCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALEMIDMHGGDLFSEE", - "protein_translation_length": 347, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3252" - ], - [ - "gene_synonym", - "yhdA" - ], - [ - "gene_synonym", - "ASAP:ABE-0010663" - ], - [ - "gene_synonym", - "ECK3240" - ], - [ - "gene_synonym", - "EcoGene:EG10018" - ], - [ - "gene_synonym", - "NP_417718.1" - ], - [ - "gene_synonym", - "JW3221" - ], - [ - "gene_synonym", - "csrD" - ], - [ - "gene_synonym", - "GeneID:947702" - ], - [ - "gene_synonym", - "GI:16131140" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P13518" - ] - ], - "dna_sequence": "ATGAGATTAACGACGAAATTTTCGGCCTTTGTTACGCTGCTCACCGGGTTAACAATTTTTGTGACTTTGCTGGGCTGTTCGCTAAGTTTCTACAACGCCATTCAGTATAAGTTTAGTCATCGCGTTCAGGCGGTGGCGACGGCGATTGATACCCACCTTGTGTCGAATGACTTCAGCGTATTAAGGCCACAAATTACCGAATTAATGATGTCGGCAGATATCGTTCGTGTAGACCTGCTCCATGGTGATAAACAGGTTTATACCCTGGCCAGAAATGGTAGTTATCGTCCAGTTGGCTCCAGCGATCTGTTTCGCGAACTGAGCGTTCCGTTGATAAAGCATCCGGGGATGTCGTTGCGTCTGGTTTATCAGGATCCGATGGGCAACTATTTCCATTCGTTGATGACCACCGCGCCGCTCACGGGGGCGATTGGCTTTATCATTGTTATGCTCTTCCTGGCGGTACGCTGGTTACAACGGCAACTTGCCGGGCAAGAATTGCTGGAAACCCGGGCTACTCGTATCTTAAACGGTGAGCGTGGCTCTAATGTGTTGGGAACCATCTATGAATGGCCGCCCAGAACCAGCAGTGCGCTGGATACGCTGCTTCGTGAAATTCAGAACGCACGCGAACAACACAGCCGTCTTGATACGCTGATCCGCTCTTATGCCGCCCAGGACGTGAAAACCGGCCTCAATAACCGACTCTTTTTCGATAATCAGTTAGCAACGTTACTGGAAGATCAGGAGAAAGTAGGTACCCACGGGATCGTGATGATGATTCGTCTGCCGGATTTCAATATGTTGAGCGATACCTGGGGGCACAGCCAGGTTGAAGAACAGTTCTTCACTCTGACGAATCTGCTGTCGACATTTATGATGCGCTACCCTGGCGCACTGCTGGCGCGTTACCACCGCAGTGATTTTGCTGCGCTGTTACCGCACCGGACGTTAAAAGAGGCAGAGAGCATCGCCGGTCAGTTAATCAAAGCCGTTGATACCTTGCCGAACAATAAAATGCTCGATCGCGACGATATGATCCACATTGGTATCTGCGCCTGGCGTAGTGGTCAGGATACCGAGCAGGTAATGGAACATGCAGAGTCTGCCACGCGTAATGCGGGATTGCAGGGCGGCAATAGCTGGGCTATTTACGATGACTCGTTGCCTGAAAAAGGACGCGGTAATGTTCGCTGGCGTACGCTTATCGAGCAAATGCTCAGTCGCGGCGGCCCGCGCCTTTATCAAAAACCGGCGGTTACTCGCGAAGGTCAGGTTCATCATCGCGAACTCATGTGCCGCATCTTCGATGGTAATGAAGAGGTTAGCTCGGCGGAGTATATGCCGATGGTCTTGCAGTTTGGCTTATCGGAAGAGTATGACCGTCTGCAAATCAGCCGTCTTATTCCACTATTGCGTTACTGGCCAGAGGAAAATCTGGCGATTCAGGTTACCGTTGAGTCGCTGATTCGCCCGCGTTTTCAGCGTTGGCTGCGCGATACGTTAATGCAATGTGAAAAATCACAACGAAAACGCATAATTATTGAACTTGCAGAGGCCGATGTAGGTCAACATATCAGTCGTTTACAACCTGTTATTCGTTTAGTGAATGCTTTAGGGGTACGGGTAGCCGTCAACCAGGCTGGTTTGACGCTGGTAAGTACCAGTTGGATCAAAGAACTTAATGTTGAGTTACTCAAGCTCCATCCGGGGCTGGTCAGAAACATTGAGAAGCGAACGGAGAACCAGCTGCTGGTTCAAAGCCTGGTGGAAGCCTGCTCCGGGACCAGCACCCAGGTTTACGCCACCGGCGTGCGTTCGCGAAGCGAGTGGCAGACCCTGATTCAGCGCGGTGTTACAGGCGGGCAAGGGGATTTTTTCGCGTCCTCACAGCCACTTGATACTAACGTGAAAAAATATTCACAAAGATACTCGGTTTAA", 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"protein_translation_length": 646, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3253" - ], - [ - "gene_synonym", - "NP_417719.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010667" - ], - [ - "gene_synonym", - "GeneID:947848" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P26646" - ], - [ - "gene_synonym", - "yhdH" - ], - [ - "gene_synonym", - "ECK3241" - ], - [ - "gene_synonym", - "JW3222" - ], - [ - "gene_synonym", - "acuI" - ], - [ - "gene_synonym", - "GI:16131141" - ], - [ - "gene_synonym", - "EcoGene:EG11315" - ] - ], - "dna_sequence": "ATGCAGGCGTTACTTTTAGAACAGCAGGACGGCAAAACTCTCGCATCAGTACAGACTCTGGACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAACTATAAAGATGCGCTGGCGATTACCGGTAAGGGAAAAATCATCCGTAATTTTCCGATGATTCCTGGGATCGATTTTGCCGGAACTGTACGCACCAGCGAAGATCCGCGTTTTCATGCCGGTCAGGAGGTGTTACTCACTGGCTGGGGCGTTGGTGAAAACCACTGGGGTGGGCTGGCGGAGCAGGCGCGAGTGAAAGGTGACTGGCTGGTTGCCATGCCGCAAGGGCTGGACGCGCGTAAAGCAATGATTATCGGTACTGCCGGTTTTACCGCCATGCTGTGTGTGATGGCGCTGGAAGATGCCGGTGTTCGCCCGCAGGACGGGGAGATTGTCGTGACGGGTGCCAGTGGTGGCGTCGGCAGTACCGCCGTGGCGCTGCTGCATAAGTTGGGTTATCAGGTCGTTGCCGTTTCCGGTCGCGAAAGTACCCATGAATATCTGAAAAGTTTAGGTGCTAGCCGTGTTCTCCCTCGTGATGAGTTTGCCGAATCCCGTCCTCTGGAAAAACAAGTCTGGGCTGGGGCAATTGACACCGTTGGCGACAAAGTGCTGGCAAAAGTGCTGGCGCAAATGAATTACGGCGGCTGCGTGGCGGCCTGTGGTCTGGCGGGTGGTTTTACTCTGCCAACCACGGTCATGCCATTTATTCTGCGTAATGTCCGTTTGCAAGGGGTGGATTCAGTAATGACGCCACCAGAACGCCGCGCACAAGCCTGGCAGCGACTGGTCGCCGATTTACCGGAATCATTCTATACCCAGGCGGCAAAAGAGATATCTCTGTCAGAGGCACCGAACTTTGCCGAGGCCATCATTAATAACCAGATCCAGGGTCGCACGCTGGTGAAGGTTAACTAA", - "dna_sequence_length": 975, - "functions": [ - "putative acryloyl-CoA reductase" - ], - "id": "CDS_3197", - "location": [ - [ - "NC_000913", - 3403484, - "+", - 975 - ] - ], - "md5": "b423e4df8b0d1774e9839da395aa8f71", - "parent_gene": "", - "protein_md5": "62169f87c02bc4c162ea1adb1fec4587", - "protein_translation": "MQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGLDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKVN", - "protein_translation_length": 324, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4509" - ], - [ - "gene_synonym", - "b4697" - ], - [ - "gene_synonym", - "GeneID:7751640" - ], - [ - "gene_synonym", - "EcoGene:EG14497" - ], - [ - "gene_synonym", - "yrdF" - ] - ], - "dna_sequence": "TTGAAATCATTATTCAATCGGTTAACGGGAAAAGCGGTTAGCCGGACAGCTTTCGTCGAACACCTTGGTCAGGAAGTTATACAACATCATCCAAACTGGAAAGTCATGATTTCGACTGACCACAAATTGATGCGCATTGATAC", - "dna_sequence_length": 143, - "id": "CDS_3198", - "location": [ - [ - "NC_000913", - 3404495, - "+", - 143 - ] - ], - "md5": "aa445098c55eb082966f24e56bc9abf2", - "parent_gene": "", - "protein_md5": "8b2488951a8fecb16ffbc2a8a660b049", - "protein_translation": "LKSLFNRLTGKAVSRTAFVEHLGQEVIQHHPNWKVMISTDHKLMRID", - "protein_translation_length": 47, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:5625572" - ], - [ - "gene_synonym", - "yrdE" - ], - [ - "gene_synonym", - "ECK4442" - ], - [ - "gene_synonym", - "b4646" - ], - [ - "gene_synonym", - "EcoGene:EG14352" - ], - [ - "gene_synonym", - "ASAP:ABE-0285243" - ] - ], - "dna_sequence": "TCCACTAAACAGCTATTATTGATACGCCTCCGTCGCCTGTTAGGTTTATGTTGCTTTGCCTGGGCGACGCTACGCTTAGCCCCTTACTTATTTCTGTGGTACCATGGGGTGAATAATCTGATTTTGTTTGACTACAAATTAATCACTCGAACCTATTTAATGCTGAGCATTGTCAATCGGTTAATTTTGCGTGCTTTAGCATTCACATCTATCCAGACGATGCAGTGAAAATTGGGTAATCCCCAGCAACCGCTGCGTAATGTCGTCTATCTTGTCGCGATCCTGGCATCCCTACATTATTTGTGGTCTGTGAAGATTATCTCATTGCAGCCCCTCATCTTCGCAGGGCTGGCTTTTCAGCTTTTCACCTTACGTTATAAGAAGTTCCGTCGATGA", - "dna_sequence_length": 396, - "id": "CDS_3199", - "location": [ - [ - "NC_000913", - 3404638, - "+", - 96 - ], - [ - "NC_000913", - 3404732, - "+", - 300 - ] - ], - "md5": "a38b65f316557a4ac0f02cdc687c930c", - "parent_gene": "", - "protein_md5": "67c87fde2a747af0256f0d8ecd57fcfb", - "protein_translation": "STKQLLLIRLRRLLGLCCFAWATLRLAPYLFLWYHGVNNLILFDYKLITRTYLMLSIVNRLILRALAFTSIQTMQ", - "protein_translation_length": 75, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947758" - ], - [ - "gene_synonym", - "b3255" - ], - [ - "gene_synonym", - "JW3223" - ], - [ - "gene_synonym", - "ASAP:ABE-0010675" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABD8" - ], - [ - "gene_synonym", - "NP_417721.1" - ], - [ - "gene_synonym", - "accB" - ], - [ - "gene_synonym", - "fabE" - ], - [ - "gene_synonym", - "ECK3242" - ], - [ - "gene_synonym", - "GI:16131143" - ], - [ - "gene_synonym", - "EcoGene:EG10275" - ] - ], - "dna_sequence": "ATGGATATTCGTAAGATTAAAAAACTGATCGAGCTGGTTGAAGAATCAGGCATCTCCGAACTGGAAATTTCTGAAGGCGAAGAGTCAGTACGCATTAGCCGTGCAGCTCCTGCCGCAAGTTTCCCTGTGATGCAACAAGCTTACGCTGCACCAATGATGCAGCAGCCAGCTCAATCTAACGCAGCCGCTCCGGCGACCGTTCCTTCCATGGAAGCGCCAGCAGCAGCGGAAATCAGTGGTCACATCGTACGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGATACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTGGACAACCGGTAGAATTTGACGAGCCGCTGGTCGTCATCGAGTAA", - "dna_sequence_length": 471, - "functions": [ - "acetyl CoA carboxylase, BCCP subunit" - ], - "id": "CDS_3200", - "location": [ - [ - "NC_000913", - 3405436, - "+", - 471 - ] - ], - "md5": "28da7a424bb82ef71d3043cfb1c622b0", - "parent_gene": "", - "protein_md5": "36871dcfe1571efa43dd6a24b6f8caf0", - "protein_translation": "MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVMQQAYAAPMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE", - "protein_translation_length": 156, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24182" - ], - [ - "gene_synonym", - "GeneID:947761" - ], - [ - "gene_synonym", - "b3256" - ], - [ - "gene_synonym", - "fabG" - ], - [ - "gene_synonym", - "accC" - ], - [ - "gene_synonym", - "ECK3243" - ], - [ - "gene_synonym", - "NP_417722.1" - ], - [ - "gene_synonym", - "JW3224" - ], - [ - "gene_synonym", - "EcoGene:EG10276" - ], - [ - "gene_synonym", - "GI:16131144" - ], - [ - "gene_synonym", - "ASAP:ABE-0010677" - ] - ], - "dna_sequence": "ATGCTGGATAAAATTGTTATTGCCAACCGCGGCGAGATTGCATTGCGTATTCTTCGTGCCTGTAAAGAACTGGGCATCAAGACTGTCGCTGTGCACTCCAGCGCGGATCGCGATCTAAAACACGTATTACTGGCAGATGAAACGGTCTGTATTGGCCCTGCTCCGTCAGTAAAAAGTTATCTGAACATCCCGGCAATCATCAGCGCCGCTGAAATCACCGGCGCAGTAGCAATCCATCCGGGTTACGGCTTCCTCTCCGAGAACGCCAACTTTGCCGAGCAGGTTGAACGCTCCGGCTTTATCTTCATTGGCCCGAAAGCAGAAACCATTCGCCTGATGGGCGACAAAGTATCCGCAATCGCGGCGATGAAAAAAGCGGGCGTCCCTTGCGTACCGGGTTCTGACGGCCCGCTGGGCGACGATATGGATAAAAACCGTGCCATTGCTAAACGCATTGGTTATCCGGTGATTATCAAAGCCTCCGGCGGCGGCGGCGGTCGCGGTATGCGCGTAGTGCGCGGCGACGCTGAACTGGCACAATCCATCTCCATGACCCGTGCGGAAGCGAAAGCTGCTTTCAGCAACGATATGGTTTACATGGAGAAATACCTGGAAAATCCTCGCCACGTCGAGATTCAGGTACTGGCTGACGGTCAGGGCAACGCTATCTATCTGGCGGAACGTGACTGCTCCATGCAACGCCGCCACCAGAAAGTGGTCGAAGAAGCGCCAGCACCGGGCATTACCCCGGAACTGCGTCGCTACATCGGCGAACGTTGCGCTAAAGCGTGTGTTGATATCGGCTATCGCGGTGCAGGTACTTTCGAGTTCCTGTTCGAAAACGGCGAGTTCTATTTCATCGAAATGAACACCCGTATTCAGGTAGAACACCCGGTTACAGAAATGATCACCGGCGTTGACCTGATCAAAGAACAGCTGCGTATCGCTGCCGGTCAACCGCTGTCGATCAAGCAAGAAGAAGTTCACGTTCGCGGCCATGCGGTGGAATGTCGTATCAACGCCGAAGATCCGAACACCTTCCTGCCAAGTCCGGGCAAAATCACCCGTTTCCACGCACCTGGCGGTTTTGGCGTACGTTGGGAGTCTCATATCTACGCGGGCTACACCGTACCGCCGTACTATGACTCAATGATCGGTAAGCTGATTTGCTACGGTGAAAACCGTGACGTGGCGATTGCCCGCATGAAGAATGCGCTGCAGGAGCTGATCATCGACGGTATCAAAACCAACGTTGATCTGCAGATCCGCATCATGAATGACGAGAACTTCCAGCATGGTGGCACTAACATCCACTATCTGGAGAAAAAACTCGGTCTTCAGGAAAAATAA", 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"b3257" - ], - [ - "gene_synonym", - "ASAP:ABE-0010690" - ], - [ - "gene_synonym", - "ECK3244" - ], - [ - "gene_synonym", - "GeneID:947762" - ], - [ - "gene_synonym", - "yhdT" - ], - [ - "gene_synonym", - "JW3225" - ], - [ - "gene_synonym", - "GI:16131145" - ], - [ - "gene_synonym", - "NP_417723.1" - ] - ], - "dna_sequence": "ATGGACACTCGTTTTGTTCAGGCCCATAAAGAGGCGCGCTGGGCGCTGGGGCTGACCCTTTTGTATCTGGCAGTTTGGTTAGTAGCCGCTTACTTATCTGGCGTTGCCCCCGGTTTTACCGGCTTTCCGCGCTGGTTTGAGATGGCCTGCATCCTGACGCCGCTGCTGTTTATTGGACTGTGCTGGGCGATGGTGAAATTTATCTATCGCGATATCCCACTGGAGGATGACGATGCAGCTTGA", - "dna_sequence_length": 243, - "functions": [ - "DUF997 family putative inner membrane protein" - ], - "id": "CDS_3202", - "location": [ - [ - "NC_000913", - 3407375, - "+", - 243 - ] - ], - "md5": "498e2802303775c1fbe7e1ac4f49c1a5", - "parent_gene": "", - "protein_md5": "345eb4fa521090ef985ca04cddd5ea81", - "protein_translation": "MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLSGVAPGFTGFPRWFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA", - "protein_translation_length": 80, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111565" - ], - [ - "gene_synonym", - "EcoGene:EG10685" - ], - [ - "gene_synonym", - "NP_417724.4" - ], - [ - "gene_synonym", - "b3258" - ], - [ - "gene_synonym", - "ASAP:ABE-0010695" - ], - [ - "gene_synonym", - "GeneID:947752" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16256" - ], - [ - "gene_synonym", - "JW3226" - ], - [ - "gene_synonym", - "panF" - ], - [ - "gene_synonym", - "ECK3245" - ] - ], - "dna_sequence": "ATGCAGCTTGAAGTAATTCTACCGCTGGTCGCCTATCTGGTGGTGGTGTTCGGTATCTCGGTTTATGCGATGCGTAAACGGAGCACCGGCACCTTCCTTAATGAGTATTTCCTCGGCAGCCGCTCTATGGGCGGTATTGTGCTGGCGATGACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCTGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCTTGCGCGCCGCTACAATGCAGTGACGCTGAACGATATGCTGTTTGCCCGCTACCAGAGTCGTCTTCTGGTGTGGCTGGCGAGTTTGAGTTTGCTGGTTGCGTTCGTTGGTGCGATGACCGTGCAGTTTATCGGCGGTGCGCGCCTGCTGGAAACCGCGGCGGGTATTCCTTATGAAACCGGGCTGCTGATTTTTGGTATCAGCATTGCGTTATATACCGCCTTTGGTGGCTTTCGCGCCAGCGTGCTGAACGACACCATGCAAGGGCTTGTGATGCTGATTGGCACCGTTGTGCTGCTTATTGGCGTAGTACATGCCGCTGGCGGCTTAAGTAACGCAGTACAGACCTTGCAAACCATCGATCCGCAACTGGTTACGCCACAAGGCGCTGACGATATTCTGTCGCCTGCCTTTATGACGTCGTTCTGGGTACTGGTGTGTTTTGGCGTGATTGGCCTGCCGCATACTGCGGTGCGCTGTATCTCTTATAAAGACAGCAAAGCCGTACATCGGGGGATCATCATCGGTACGATTGTGGTCGCAATTCTGATGTTCGGTATGCACCTGGCCGGAGCGTTAGGTCGGGCGGTGATCCCCGATCTCACCGTACCGGACCTGGTGATCCCAACGTTAATGGTAAAAGTGCTGCCACCGTTTGCTGCCGGGATCTTCCTGGCTGCACCGATGGCTGCGATCATGTCGACAATTAACGCCCAACTGCTGCAAAGTTCCGCTACGATCATTAAAGATCTCTATCTGAATATCCGTCCGGATCAAATGCAAAACGAGACGCGTCTGAAGCGGATGTCGGCGGTAATTACGTTAGTTCTCGGCGCGTTGCTGCTGCTTGCCGCCTGGAAGCCGCCAGAAATGATCATCTGGCTGAATTTGTTGGCCTTCGGTGGGCTGGAAGCCGTTTTCCTGTGGCCGCTGGTGCTGGGTCTTTACTGGGAACGCGCCAACGCCAAAGGCGCGCTAAGTGCGATGATCGTTGGCGGCGTGCTGTATGCCGTACTCGCGACGCTGAATATTCAGTACCTGGGCTTCCACCCTATCGTGCCCTCGTTACTACTAAGTTTGCTGGCTTTCCTGGTCGGAAACCGTTTCGGTACATCCGTCCCGCAAGCTACCGTTTTGACTACTGATAAATAA", 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- [ - "gene_synonym", - "EcoGene:EG11497" - ], - [ - "gene_synonym", - "GI:16131147" - ], - [ - "gene_synonym", - "prm-1" - ], - [ - "gene_synonym", - "ECK3246" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8T1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010697" - ], - [ - "gene_synonym", - "yhdI" - ], - [ - "gene_synonym", - "GeneID:947708" - ], - [ - "gene_synonym", - "JW3227" - ] - ], - "dna_sequence": "ATGCCTTGGATCCAACTGAAACTGAACACCACCGGCGCGAACGCGGAAGATCTTAGCGATGCGCTGATGGAAGCGGGTGCCGTTTCTATCACTTTTCAGGATACCCACGATACGCCAGTATTTGAACCGCTGCCGGGCGAAACGCGCCTGTGGGGCGACACCGATGTGATTGGTCTGTTCGACGCTGAAACCGATATGAACGACGTGGTGGCGATTCTGGAAAACCATCCGCTGCTCGGCGCAGGCTTCGCGCATAAAATCGAACAACTAGAAGATAAAGACTGGGAGCGCGAATGGATGGATAATTTCCACCCGATGCGCTTTGGTGAACGACTGTGGATCTGCCCTAGCTGGCGTGATGTGCCGGACGAAAACGCCGTCAACGTGATGTTAGATCCAGGGCTGGCGTTTGGTACGGGTACCCATCCAACCACCTCTCTGTGCCTGCAATGGCTCGACAGCCTCGATTTAACCGGTAAAACAGTCATCGACTTTGGCTGTGGTTCCGGCATTCTGGCGATCGCGGCGCTGAAACTGGGTGCAGCAAAAGCCATTGGTATTGATATCGATCCGCAGGCGATTCAGGCCAGCCGCGATAACGCCGAACGTAATGGCGTTTCTGACCGTCTGGAACTCTACTTACCGAAAGATCAGCCAGAAGAAATGAAAGCCGACGTGGTGGTCGCTAACATCCTTGCAGGCCCATTACGTGAACTGGCACCGTTAATCAGCGTCCTGCCGGTTTCAGGCGGTTTGCTGGGCCTTTCCGGTATTCTGGCAAGCCAGGCAGAGAGCGTTTGTGAAGCTTATGCCGATAGCTTCGCACTGGACCCGGTCGTGGAAAAAGAAGAGTGGTGCCGTATTACCGGTCGTAAGAATTAA", - "dna_sequence_length": 882, - "functions": [ - "methyltransferase for 50S ribosomal subunit protein L11" - ], - 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"gene_synonym", - "EcoGene:EG11311" - ], - [ - "gene_synonym", - "NP_417726.1" - ] - ], - "dna_sequence": "ATGCGCATCGGACAATATCAGCTCAGAAATCGCCTGATCGCAGCGCCCATGGCTGGCATTACAGACAGACCTTTTCGGACGTTGTGCTACGAGATGGGAGCCGGATTGACAGTATCCGAGATGATGTCTTCTAACCCACAGGTTTGGGAAAGCGACAAATCTCGTTTACGGATGGTGCACATTGATGAACCCGGTATTCGCACCGTGCAAATTGCTGGTAGCGATCCGAAAGAAATGGCAGATGCAGCACGTATTAACGTGGAAAGCGGTGCCCAGATTATTGATATCAATATGGGTTGCCCGGCTAAAAAAGTGAATCGCAAGCTCGCAGGTTCAGCCCTCTTGCAGTACCCGGATGTCGTTAAATCGATCCTTACCGAGGTCGTCAATGCAGTGGACGTTCCTGTTACCCTGAAGATTCGCACCGGCTGGGCACCGGAACACCGTAACTGCGAAGAGATTGCCCAACTGGCTGAAGACTGTGGCATTCAGGCTCTGACCATTCATGGCCGTACACGCGCCTGTTTGTTCAATGGAGAAGCTGAGTACGACAGTATTCGGGCAGTTAAGCAGAAAGTTTCCATTCCGGTTATCGCGAATGGCGACATTACTGACCCGCTTAAAGCCAGAGCTGTGCTCGACTATACAGGGGCGGATGCCCTGATGATAGGCCGCGCAGCTCAGGGAAGACCCTGGATCTTTCGGGAAATCCAGCATTATCTGGACACTGGGGAGTTGCTGCCCCCGCTGCCTTTGGCAGAGGTTAAGCGCTTGCTTTGCGCGCACGTTCGGGAACTGCATGACTTTTATGGTCCGGCAAAAGGGTACCGAATTGCACGTAAACACGTTTCCTGGTATCTCCAGGAACACGCTCCAAATGACCAGTTTCGGCGCACATTCAACGCCATTGAGGATGCCAGCGAACAGCTGGAGGCGTTGGAGGCATACTTCGAAAATTTTGCGTAA", - "dna_sequence_length": 966, 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"gene_synonym", - "GI:16131149" - ], - [ - "gene_synonym", - "GeneID:947697" - ], - [ - "gene_synonym", - "EcoGene:EG10317" - ], - [ - "gene_synonym", - "ECK3248" - ] - ], - "dna_sequence": "ATGTTCGAACAACGCGTAAATTCTGACGTACTGACCGTTTCTACCGTTAACTCTCAGGATCAGGTAACCCAAAAACCCCTGCGTGACTCGGTTAAACAGGCACTGAAGAACTATTTTGCTCAACTGAATGGTCAGGATGTGAATGACCTCTATGAGCTGGTACTGGCTGAAGTAGAACAGCCCCTGTTGGACATGGTGATGCAATACACCCGTGGTAACCAGACCCGTGCTGCGCTGATGATGGGCATCAACCGTGGTACGCTGCGTAAAAAATTGAAAAAATACGGCATGAACTAA", - "dna_sequence_length": 297, - "functions": [ - "global DNA-binding transcriptional dual regulator" - ], - "id": "CDS_3206", - "location": [ - [ - "NC_000913", - 3411271, - "+", - 297 - ] - ], - "md5": "9fae3a25ba8e985ccd9e0c150a58ab70", - "parent_gene": "", - "protein_md5": "e9ff87b2f6cbc07850e519f60813e1f6", - "protein_translation": "MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN", - "protein_translation_length": 98, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111566" - ], - [ - "gene_synonym", - "b3262" - ], - [ - "gene_synonym", - "GeneID:947695" - ], - [ - "gene_synonym", - "yhdJ" - ], - [ - "gene_synonym", - "ASAP:ABE-0010706" - ], - [ - "gene_synonym", - "ccrM" - ], - [ - "gene_synonym", - "JW5543" - ], - [ - "gene_synonym", - "NP_417728.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28638" - ], - [ - "gene_synonym", - "EcoGene:EG11498" - ], - [ - "gene_synonym", - "ECK3249" - ] - ], - "dna_sequence": "ATGAGAACAGGATGTGAACCGACCCGGTTTGGTAATGAAGCTAAGACCATTATTCACGGTGATGCGCTTGCCGAACTTAAAAAGATCCCCGCCGAAAGTGTCGATCTGATCTTTGCCGACCCACCATATAACATCGGTAAAAATTTTGATGGTCTGATCGAAGCCTGGAAAGAAGATCTGTTTATCGACTGGCTGTTTGAAGTGATTGCAGAGTGCCACCGCGTTCTGAAAAAGCAGGGCAGCATGTACATCATGAACAGTACGGAAAACATGCCCTTTATCGATCTCCAGTGCCGCAAGCTTTTTACCATCAAAAGTCGCATCGTCTGGTCATATGACAGTTCTGGAGTGCAGGCGAAAAAACACTACGGCTCCATGTACGAACCCATCCTGATGATGGTGAAAGACGCAAAGAACTACACATTCAACGGTGATGCTATTCTGGTAGAAGCCAAAACCGGATCGCAGCGCGCGTTGATCGATTATCGCAAAAATCCTCCACAGCCTTACAATCATCAAAAAGTACCGGGTAACGTTTGGGATTTTCCGCGCGTGCGTTATTTGATGGATGAATATGAAAACCACCCGACGCAAAAACCGGAAGCCTTACTGAAACGCATTATTCTCGCCTCTTCCAACCCAGGCGATATCGTTCTCGACCCGTTTGCTGGTAGCTTTACTACCGGTGCCGTAGCCATCGCCAGCGGACGAAAATTCATTGGTATTGAGATCAACAGCGAGTACATCAAAATGGGGCTTCGACGGCTGGATGTCGCGTCGCATTACTCTGCGGAAGAACTGGCGAAAGTGAAAAAAAGAAAGACCGGCAACCTGTCAAAACGAAGCCGGTTAAGCGAAGTTGACCCCGATCTCATTACAAAGTAA", - "dna_sequence_length": 885, - "functions": [ - "DNA adenine methyltransferase, SAM-dependent" - ], - "id": 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"UniProtKB/Swiss-Prot:P64619" - ] - ], - "dna_sequence": "ATGATTCGCAAGTATTGGTGGCTCGTCGTTTTCGCTGTCTTCGTTTTTCTGTTTGATACTTTACTGATGCAGTGGATTGAACTGCTGGCAACAGAAACAGACAAATGCCGCAATATGAACTCAGTTAATCCACTAAAACTGGTTAACTGTGACGAACTGAATTTTCAGGACAGAATGTGA", - "dna_sequence_length": 180, - "functions": [ - "putative membrane protein" - ], - "id": "CDS_3208", - "location": [ - [ - "NC_000913", - 3412621, - "+", - 180 - ] - ], - "md5": "fc526b1de70a2e512cf07ad773f3d867", - "parent_gene": "", - "protein_md5": "105503ec0a857ae7f390413c9c7c874c", - "protein_translation": "MIRKYWWLVVFAVFVFLFDTLLMQWIELLATETDKCRNMNSVNPLKLVNCDELNFQDRM", - "protein_translation_length": 59, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "acrS" - ], - [ - "gene_synonym", - "b3264" - ], - [ - "gene_synonym", - "GI:16131152" - ], - [ - "gene_synonym", - "yhdK" - ], - [ - "gene_synonym", - "envR" - ], - [ - "gene_synonym", - "ASAP:ABE-0010712" - ], - [ - "gene_synonym", - "ECK3251" - ], - [ - "gene_synonym", - "GeneID:947704" - ], - [ - "gene_synonym", - "JW3232" - ], - [ - "gene_synonym", - "EcoGene:EG11741" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACT2" - ], - [ - "gene_synonym", - "NP_417730.1" - ] - ], - "dna_sequence": "ATGGCAAAAAGAACCAAAGCCGAAGCTCTGAAGACCCGGCAAGAACTGATTGAAACTGCCATCGCCCAGTTTGCGCAGCATGGCGTAAGCAAGACGACGCTCAACGACATTGCCGACGCCGCTAACGTTACGCGTGGCGCTATCTACTGGCACTTCGAAAACAAGACTCAACTGTTTAATGAGATGTGGTTGCAACAGCCTTCATTGCGGGAGTTAATCCAGGAACACTTGACGGCTGGATTAGAGCATGACCCGTTTCAACAATTGCGTGAAAAATTGATTGTCGGCTTGCAATATATTGCCAAAATTCCCCGCCAGCAGGCGTTGCTGAAAATCTTATATCACAAATGTGAATTTAATGATGAGATGCTGGCCGAGGGAGTGATACGCGAAAAGATGGGCTTTAATCCGCAGACTCTCCGCGAAGTATTGCAGGCGTGTCAGCAACAAGGTTGTGTAGCAAATAACCTCGATTTAGATGTTGTGATGATTATTATTGATGGTGCCTTCAGCGGAATTGTTCAAAACTGGTTAATGAATATGGCGGGTTATGATCTTTATAAACAAGCCCCCGCTCTGGTCGATAACGTATTAAGAATGTTCATGCCAGATGAAAACATAACGAAATTAATTCATCAAACGAATGAATTAAGTGTCATGTAA", - "dna_sequence_length": 663, - "functions": [ - "acrAB operon transcriptional repressor" - ], - "id": "CDS_3209", - "location": [ - [ - "NC_000913", - 3413465, - "-", - 663 - ] - ], - "md5": "e258c6c4a2422b407135e9240e95e1ca", - "parent_gene": "", - "protein_md5": "955dd71932630ce6c7f65e0defb3d306", - "protein_translation": "MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVTRGAIYWHFENKTQLFNEMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAKIPRQQALLKILYHKCEFNDEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLDVVMIIIDGAFSGIVQNWLMNMAGYDLYKQAPALVDNVLRMFMPDENITKLIHQTNELSVM", - "protein_translation_length": 220, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24180" - ], - [ - "gene_synonym", - "b3265" - ], - [ - "gene_synonym", - "ASAP:ABE-0010722" - ], - [ - "gene_synonym", - "GI:16131153" - ], - [ - "gene_synonym", - "JW3233" - ], - [ - "gene_synonym", - "NP_417731.1" - ], - [ - "gene_synonym", - "GeneID:947706" - ], - [ - "gene_synonym", - "ECK3252" - ], - [ - "gene_synonym", - "acrE" - ], - [ - "gene_synonym", - "envC" - ], - [ - "gene_synonym", - "EcoGene:EG10266" - ] - ], - "dna_sequence": "ATGACGAAACATGCCAGGTTTTTCCTCCTGCCCTCCTTTATTCTGATCTCCGCGGCTTTAATCGCCGGTTGTAACGATAAGGGAGAAGAGAAAGCTCACGTCGGTGAACCGCAGGTTACCGTTCATATTGTAAAAACGGCCCCGTTAGAAGTTAAGACTGAATTACCAGGCCGCACCAATGCTTATCGTATAGCCGAAGTTCGCCCACAGGTTAGCGGGATCGTACTGAATCGCAATTTCACTGAAGGCAGCGATGTGCAAGCAGGCCAGTCCCTGTACCAGATCGATCCCGCGACCTATCAGGCAAATTATGACAGCGCGAAAGGCGAACTGGCGAAAAGTGAAGCCGCCGCCGCCATCGCGCATTTGACGGTAAAACGTTACGTTCCGCTCGTGGGTACGAAATACATCAGCCAGCAGGAGTACGACCAGGCCATTGCTGATGCTCGTCAGGCCGATGCCGCCGTGATTGCCGCAAAAGCCACAGTCGAAAGCGCTCGCATCAATCTTGCTTATACCAAAGTCACTGCGCCAATTAGCGGACGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCTACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACGCCACCAGCAACGTAGAGTTGGTCATGGAAAACGGTCAAACCTATCCCCTGAAAGGTACGCTGCAATTCTCCGATGTGACCGTTGATGAAAGCACCGGCTCCATAACCCTACGTGCTGTCTTCCCTAACCCGCAACATACGCTTTTGCCGGGTATGTTTGTGCGTGCACGGATTGATGAAGGCGTCCAACCTGACGCCATTCTTATCCCGCAACAAGGCGTTAGCCGCACACCGCGTGGTGATGCAACCGTGCTGATTGTTAACGATAAAAGTCAGGTTGAAGCGCGCCCTGTCGTTGCCAGTCAGGCGATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAA", - "dna_sequence_length": 1158, - "functions": [ - "cytoplasmic membrane lipoprotein" - ], - "id": "CDS_3210", - "location": [ - [ - "NC_000913", - 3413864, - "+", - 1158 - ] - ], - "md5": "03dde278326822c02a0bb742cf0a839f", - "parent_gene": "", - "protein_md5": "01051bed14d6f4398c6990af584e887e", - "protein_translation": "MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVTVHIVKTAPLEVKTELPGRTNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQANYDSAKGELAKSEAAAAIAHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAKATVESARINLAYTKVTAPISGRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQSSNDFMRLKQSVEQGNLHKENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLRAVFPNPQHTLLPGMFVRARIDEGVQPDAILIPQQGVSRTPRGDATVLIVNDKSQVEARPVVASQAIGDKWLISEGLKSGDQVIVSGLQKARPGEQVKATTDTPADTASK", - "protein_translation_length": 385, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3266" - ], - [ - "gene_synonym", - "GI:16131154" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24181" - ], - [ - "gene_synonym", - "GeneID:947768" - ], - [ - "gene_synonym", - "NP_417732.1" - ], - [ - "gene_synonym", - "ECK3253" - ], - [ - "gene_synonym", - "acrF" - ], - [ - "gene_synonym", - "JW3234" - ], - [ - "gene_synonym", - "ASAP:ABE-0010724" - ], - [ - "gene_synonym", - "EcoGene:EG10267" - ], - [ - "gene_synonym", - "envD" - ] - ], - "dna_sequence": "ATGGCAAACTTTTTTATTCGACGACCGATATTTGCATGGGTGCTGGCCATTATTCTGATGATGGCGGGCGCACTGGCGATCCTACAATTGCCCGTCGCTCAGTATCCAACAATTGCACCGCCTGCGGTTTCTGTTTCAGCAAACTATCCGGGCGCTGATGCGCAGACCGTGCAGGATACGGTGACGCAGGTTATCGAACAGAATATGAACGGTATCGATAACCTGATGTATATGTCCTCCACCAGCGATTCCGCCGGTAGCGTGACAATTACCCTTACCTTCCAGTCCGGGACCGATCCTGATATCGCGCAAGTGCAGGTGCAGAACAAACTCCAGCTCGCCACGCCGTTGCTGCCGCAGGAGGTTCAGCAGCAGGGGATCAGTGTTGAAAAGTCCAGTAGCAGCTATTTGATGGTGGCGGGCTTTGTCTCTGATAACCCAGGCACCACACAGGACGATATCTCGGACTATGTGGCCTCTAACGTTAAAGATACGCTTAGCCGTCTGAATGGCGTCGGTGACGTACAGCTTTTCGGCGCACAGTATGCGATGCGTATCTGGCTGGATGCCGATCTGCTAAACAAATATAAACTGACACCGGTTGATGTGATTAACCAGTTGAAGGTACAGAACGATCAGATCGCTGCCGGACAGTTGGGCGGAACGCCAGCGTTACCAGGGCAACAATTGAACGCCTCGATTATTGCTCAGACGCGGTTTAAAAATCCGGAAGAATTCGGCAAAGTGACCCTGCGCGTAAACAGTGACGGCTCGGTGGTACGCCTGAAAGATGTCGCACGGGTTGAACTTGGCGGTGAAAACTATAACGTTATCGCTCGTATCAACGGAAAACCGGCGGCGGGCCTGGGGATTAAGCTGGCAACCGGCGCGAATGCTCTCGATACCGCGAAAGCCATTAAGGCAAAACTGGCGGAATTACAGCCATTCTTCCCGCAGGGAATGAAGGTTCTCTACCCTTATGACACCACGCCATTCGTCCAGCTTTCTATTCACGAAGTGGTAAAAACGCTGTTCGAAGCCATTATGCTGGTGTTCCTGGTGATGTATCTGTTCTTGCAGAATATGCGAGCAACGCTGATCCCCACCATTGCGGTACCCGTGGTGTTGTTAGGGACGTTTGCCATCCTCGCCGCTTTTGGTTACTCCATCAACACACTAACGATGTTCGGGATGGTGCTTGCCATCGGGCTGCTCGTCGATGATGCGATAGTGGTGGTGGAGAACGTCGAGCGCGTGATGATGGAGGATAAGCTCCCGCCAAAAGAAGCGACGGAAAAATCGATGTCGCAAATTCAGGGCGCACTGGTGGGTATCGCGATGGTGCTGTCAGCGGTATTTATTCCGATGGCATTCTTCGGCGGTTCTACTGGGGCAATTTATCGCCAGTTCTCTATCACCATCGTTTCGGCAATGGCGCTTTCTGTTCTGGTGGCATTGATTCTTACCCCTGCGTTATGTGCAACGCTGCTTAAACCCGTCTCTGCTGAGCATCACGAAAATAAGGGCGGTTTCTTCGGTTGGTTTAATACCACCTTCGATCATAGCGTTAACCACTACACCAACAGCGTCGGCAAAATCCTCGGATCCACAGGACGATATTTACTGATCTATGCGCTGATTGTTGCAGGAATGGTGGTGTTGTTTTTACGTCTTCCGTCTTCCTTCTTACCTGAAGAGGATCAGGGTGTCTTTCTGACCATGATTCAGTTACCCGCTGGCGCGACGCAAGAGCGGACGCAAAAAGTGTTGGATCAAGTTACGGATTACTATCTGAAGAACGAGAAAGCGAACGTTGAAAGTGTCTTTACGGTTAACGGCTTTAGCTTCAGCGGCCAGGCACAAAACGCCGGTATGGCCTTCGTCAGTCTGAAACCGTGGGAAGAGCGTAATGGTGACGAAAACAGTGCGGAAGCGGTAATCCATCGTGCCAAAATGGAATTGGGCAAGATCCGCGACGGTTTTGTCATTCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATGCCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACACCGCGCAGTTTAAACTGGAAGTTGACCAGGAAAAGGCGCAGGCATTAGGTGTTTCACTTTCTGACATCAATCAGACCATTTCAACGGCGCTGGGTGGGACTTACGTTAACGACTTCATCGACCGTGGCCGCGTGAAAAAGTTGTATGTTCAGGCGGATGCCAAATTCCGTATGCTGCCAGAAGATGTCGATAAACTTTATGTCCGCAGCGCCAACGGCGAAATGGTGCCATTCTCGGCCTTTACCACTTCACATTGGGTGTATGGCTCTCCGCGACTGGAACGCTACAACGGTCTGCCGTCAATGGAGATTCAGGGGGAAGCCGCGCCAGGAACCAGTTCCGGCGATGCCATGGCGTTGATGGAAAACCTTGCGTCAAAATTACCTGCGGGCATTGGTTATGACTGGACGGGTATGTCGTATCAGGAACGCTTATCGGGAAACCAGGCTCCCGCTCTGGTAGCAATTTCCTTTGTGGTTGTTTTCCTGTGCCTTGCTGCACTCTATGAAAGCTGGTCAATTCCTGTCTCGGTTATGTTGGTAGTGCCGTTAGGGATTGTCGGCGTGCTGCTGGCGGCGACACTCTTTAATCAAAAAAATGACGTCTACTTTATGGTGGGCTTGCTAACGACAATTGGCTTGTCGGCCAAAAACGCTATTTTGATCGTTGAGTTCGCTAAAGATCTCATGGAGAAAGAGGGTAAAGGTGTTGTTGAAGCGACACTGATGGCAGTACGTATGCGTCTGCGTCCTATCCTGATGACCTCTCTCGCCTTTATTCTCGGCGTATTACCGCTAGCTATCAGTAACGGTGCCGGCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGATAA", - "dna_sequence_length": 3105, - "functions": [ - "multidrug efflux system protein" - ], - "id": "CDS_3211", - "location": [ - [ - "NC_000913", - 3415033, - "+", - 3105 - ] - ], - "md5": "5d629896f78627284f4fd8383e5eed78", - "parent_gene": "", - "protein_md5": "f5fa0d339f2f184eefd443a5e880232a", - "protein_translation": "MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVSVSANYPGADAQTVQDTVTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDIAQVQVQNKLQLATPLLPQEVQQQGISVEKSSSSYLMVAGFVSDNPGTTQDDISDYVASNVKDTLSRLNGVGDVQLFGAQYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQLGGTPALPGQQLNASIIAQTRFKNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYNVIARINGKPAAGLGIKLATGANALDTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQLSIHEVVKTLFEAIMLVFLVMYLFLQNMRATLIPTIAVPVVLLGTFAILAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMMEDKLPPKEATEKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATLLKPVSAEHHENKGGFFGWFNTTFDHSVNHYTNSVGKILGSTGRYLLIYALIVAGMVVLFLRLPSSFLPEEDQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKNEKANVESVFTVNGFSFSGQAQNAGMAFVSLKPWEERNGDENSAEAVIHRAKMELGKIRDGFVIPFNMPAIVELGTATGFDFELIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGLEDTAQFKLEVDQEKAQALGVSLSDINQTISTALGGTYVNDFIDRGRVKKLYVQADAKFRMLPEDVDKLYVRSANGEMVPFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAMALMENLASKLPAGIGYDWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSVMLVVPLGIVGVLLAATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVVEATLMAVRMRLRPILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFFVPVFFVVIRRCFKG", - "protein_translation_length": 1034, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417733.1" - ], - [ - "gene_synonym", - "b3267" - ], - [ - "gene_synonym", - "GeneID:947767" - ], - [ - "gene_synonym", - "EcoGene:EG12833" - ], - [ - "gene_synonym", - "ASAP:ABE-0010728" - ], - [ - "gene_synonym", - "ECK3254" - ], - [ - "gene_synonym", - "yhdV" - ], - [ - "gene_synonym", - "JW3235" - ], - [ - "gene_synonym", - "GI:16131155" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64622" - ] - ], - "dna_sequence": "ATGAAAAGATTAATTCCTGTGGCATTGCTCACCGCATTGCTGGCGGGCTGTGCTCACGATTCGCCCTGCGTTCCGGTTTATGACGATCAGGGTCGTCTGGTTCACACCAATACCTGTATGAAAGGCACGACTCAGGATAACTGGGAAACGGCTGGGGCTATTGCCGGCGGGGCAGCTGCTGTTGCTGGCCTGACGATGGGGATCATCGCTCTATCGAAATAA", - "dna_sequence_length": 222, - "functions": [ - "putative outer membrane protein" - ], - "id": "CDS_3212", - "location": [ - [ - "NC_000913", - 3418390, - "+", - 222 - ] - ], - "md5": "c6894cafa9068f849b58b01a946840a4", - "parent_gene": "", - "protein_md5": "8a1c0a537e4d96325b599a8f31971dc6", - "protein_translation": "MKRLIPVALLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAAVAGLTMGIIALSK", - "protein_translation_length": 73, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947766" - ], - [ - "gene_synonym", - "ASAP:ABE-0010731" - ], - [ - "gene_synonym", - "EcoGene:EG12834" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45766" - ], - [ - "gene_synonym", - "b3268" - ], - [ - "gene_synonym", - "yhdW" - ], - [ - "gene_synonym", - "ECK3255" - ], - [ - "gene_synonym", - "JW3236" - ] - ], - "dna_sequence": "ATGAAAAAGATGATGATAGCCACACTGGCTGCCGCCAGCGTGCTGCTTGCCGTTGCAAATCAGGCGGCTGCTGGCGCGACGCTTGATGCCGTTCAGAAAAAAGGTTTTGTGCAATGCGGGATCAGTGATGGATTACCTGGGTTCTCTTATGCCGATGCTGACGGTAAGTTTTCAGGTATTGATGTTGATATTTGTCGTGGTGTTGCCGCTGCTGTATTTGGTGACGACACGAAAGTGAAATATACCCCGCTCACTGCAAAAGAACGCTTCACCGCTTTACAGTCAGGGGAGGTGGATTTGCTCTCCCGTAATACGACCTGGACTTCATCTCGCGATGCCGGGATGGGAATGGCATTTACCGGCGTCACTTATTACGACGGCATTGGCTTCCTGACGCACGATAAAGCGGGGCTAAAAAGCGCGAAAGAACTGGATGGCGCTACCGTCTGTATTCAGGCGGGTACTGATACCGAACTCAACGTCGCCGACTACTTCAAGGCAAACAATATGAAGTACACACCGGTGACTTTCGATCGCTCTGACGAATCAGCGAAGGCACTGGAATCTGGTCGCTGCGATACGCTGGCCTCGGATCAATCACAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAA", - "dna_sequence_length": 1026, - "id": "CDS_3213", - "location": [ - [ - "NC_000913", - 3419042, - "+", - 66 - ], - [ - "NC_000913", - 3419107, - "+", - 960 - ] - ], - "md5": "7d641a9d0fe4360ee224f5968090587a", - "parent_gene": "", - "protein_md5": "3417c2ed076970fa0b84ae9d3b83cb68", - "protein_translation": "MKKMMIATLAAASVLLAVANQAAAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR", - "protein_translation_length": 341, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010733" - ], - [ - "gene_synonym", - "GeneID:947765" - ], - [ - "gene_synonym", - "EcoGene:EG12835" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45767" - ], - [ - "gene_synonym", - "JW5544" - ], - [ - "gene_synonym", - "b3269" - ], - [ - "gene_synonym", - "YP_026209.1" - ], - [ - "gene_synonym", - "ECK3256" - ], - [ - "gene_synonym", - "GI:49176333" - ], - [ - "gene_synonym", - "yhdX" - ] - ], - "dna_sequence": "ATGTCTCATCGCCGCTCAACCGTTAAAGGCTCACTCTCTTTTGCCAACCCTACGGTTCGCGCCTGGTTATTCCAGATCCTTGCCGTTGTTGCTGTTGTCGGCATTGTTGGTTGGTTATTTCACAACACTGTAACGAATCTCAATAATCGTGGCATTACTTCAGGTTTTGCCTTTCTGGATCGCGGCGCTGGCTTCGGTATTGTCCAGCATTTGATCGATTACCAGCAGGGCGACACCTACGGACGCGTTTTTATTGTCGGCTTACTCAATACGCTACTGGTTTCTGCATTGTGTATTGTGTTCGCTTCTGTTTTGGGCTTCTTTATCGGTCTGGCGAGACTTTCGGATAACTGGCTGCTACGAAAGCTTTCCACAATTTATATTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTGGGAGACGGATTTATTGCGTTTATCCTGGCTGTTGTTATGGCTATAGTCCTTTCTGTTGGGCTATTCCGCTTTAATAAAACATACCAGATAAAGACCGGACAACTGCGCCGCACCTGGCCGATCGCCGCAGTGTTGATCATTGGTTTGCCTTTACTGGCGCAATGGCTTTTTGGCGCAGCACTACACTGGGATGTCCCAGCCCTACGAGGCTTTAACTTCCGCGGCGGGATGGTTTTAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCAGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCATTGCGGGTGATTATTCCACCGTTAACCAGCCAGTATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCATCGCGATCGTTGAACGCTAA", - "dna_sequence_length": 1182, - "functions": [ - "putative amino acid ABC transporter permease" - ], - "id": "CDS_3214", - "location": [ - [ - "NC_000913", - 3420134, - "+", - 1182 - ] - ], - "md5": "5cfa1d7eace7b8b3a3ab09428c010c3b", - "parent_gene": "", - "protein_md5": "d5fcfc167d949c2649ded980735916c2", - "protein_translation": "MSHRRSTVKGSLSFANPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRIAIVER", - "protein_translation_length": 393, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010736" - ], - [ - "gene_synonym", - "GI:90111567" - ], - [ - "gene_synonym", - "GeneID:947764" - ], - [ - "gene_synonym", - "b3270" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45768" - ], - [ - "gene_synonym", - "JW5545" - ], - [ - "gene_synonym", - "NP_417736.2" - ], - [ - "gene_synonym", - "ECK3257" - ], - [ - "gene_synonym", - "yhdY" - ], - [ - "gene_synonym", - "EcoGene:EG12836" - ] - ], - "dna_sequence": "ATGACAAAAGTATTGCTGTCTCATCCCCCGCGCCCGGCGAGCCATAACTCAAGCCGCGCGATGGTGTGGGTGCGAAAAAATCTGTTCTCCAGCTGGAGCAATAGCCTGCTGACTATTGGCTGCATATGGTTGATGTGGGAACTGATCCCACCGTTGCTGAACTGGGCATTTTTGCAGGCTAACTGGGTTGGCTCAACGCGTGCCGACTGCACAAAAGCCGGTGCCTGTTGGGTCTTCATCCACGAACGATTTGGTCAGTTTATGTATGGGCTTTACCCACACGACCAACGCTGGCGAATTAACCTCGCATTACTGATTGGGCTTGTGTCGATCGCACCAATGTTCTGGAAAATACTCCCGCATCGCGGTCGCTATATTGCGGCCTGGGCGGTGATTTACCCACTGATTGTCTGGTGGCTGATGTATGGCGGTTTTTTTGCTCTTGAGCGGGTTGAAACCCGGCAATGGGGCGGGCTGACGCTAACTTTAATTATTGCATCAGTTGGGATTGCGGGGGCGCTACCGTGGGGGATCTTACTGGCGTTAGGTCGCCGCTCCCATATGCCGATTGTGCGTATCTTATCGGTCATTTTTATCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGCGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAACTCAGGGGCTGGTTATTCTGCCACAGGCGTTGAAGCTGGTAATTCCTGGGCTGGTAAATACCATCATCGCACTCTTCAAAGATACCAGCCTGGTGATCATTATCGGGTTGTTCGATCTTTTCAGTAGCGTTCAGCAGGCAACCGTTGATCCCGCCTGGTTGGGTATGTCGACGGAAGGGTATGTTTTCGCCGCGCTGATCTACTGGATCTTCTGTTTCAGCATGTCGCGCTATAGCCAGTATCTGGAAAAACGTTTTAACACCGGGCGTACACCGCATTGA", - "dna_sequence_length": 1104, - "functions": [ - "putative amino acid ABC transporter permease" - ], - "id": "CDS_3215", - "location": [ - [ - "NC_000913", - 3421325, - "+", - 1104 - ] - ], - "md5": "e9e75744dd18091bdd7914b968442a1c", - "parent_gene": "", - "protein_md5": "de5bdeed68994facad6ccc8ba26eacd1", - "protein_translation": "MTKVLLSHPPRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWLMWELIPPLLNWAFLQANWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINLALLIGLVSIAPMFWKILPHRGRYIAAWAVIYPLIVWWLMYGGFFALERVETRQWGGLTLTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEGYVFAALIYWIFCFSMSRYSQYLEKRFNTGRTPH", - "protein_translation_length": 367, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947763" - ], - [ - "gene_synonym", - "b3271" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45769" - ], - [ - "gene_synonym", - "GI:16131159" - ], - [ - "gene_synonym", - "NP_417737.1" - ], - [ - "gene_synonym", - "EcoGene:EG12837" - ], - [ - "gene_synonym", - "ASAP:ABE-0010738" - ], - [ - "gene_synonym", - "JW3239" - ], - [ - "gene_synonym", - "ECK3258" - ], - [ - "gene_synonym", - "yhdZ" - ] - ], - "dna_sequence": "ATGAGCCAAATTTTACTGCAACCTGCTAACGCGATGATTACGCTGGAAAACGTCAATAAATGGTATGGACAATTCCATGTTTTGAAAAATATAAATTTAACCGTGCAACCGGGAGAACGGATCGTTCTGTGTGGCCCTTCAGGTTCCGGTAAATCGACAACCATTCGTTGTATTAATCATCTGGAAGAACATCAACAGGGACGGATCGTGGTAGATGGCATCGAACTTAATGAAGATATCCGCAATATTGAGCGCGTCAGGCAGGAAGTGGGAATGGTCTTTCAGCATTTCAATCTCTTCCCTCATCTGACCGTTTTACAGAACTGTACCCTGGCACCGATTTGGGTACGCAAGATGCCTAAGAAAGAGGCTGAAGATCTGGCGGTGCATTACCTAGAGCGGGTGAGAATTGCCGAACATGCGCATAAGTTTCCCGGACAGATTTCAGGTGGTCAGCAGCAACGCGTTGCCATTGCGCGTTCGCTGTGTATGAAGCCGAAAATTATGTTGTTTGATGAGCCAACGTCGGCGCTCGATCCTGAGATGGTGAAAGAGGTGCTGGATACGATGATTGGGCTGGCGCAGTCGGGTATGACAATGTTGTGTGTAACACATGAGATGGGGTTTGCACGAACCGTCGCTGACCGGGTAATTTTTATGGATCGTGGGGAAATAGTGGAGCAAGCTGCACCTGATGAATTTTTTGCGCATCCTAAATCAGAGCGTACGAGGGCATTTTTATCGCAGGTAATCCATTAA", - "dna_sequence_length": 759, - "functions": [ - "putative amino acid ABC transporter ATPase" - ], - "id": "CDS_3216", - "location": [ - [ - "NC_000913", - 3422436, - "+", - 759 - ] - ], - "md5": "f47e7134a5a96e1e30a44aa1e2d0db98", - "parent_gene": "", - "protein_md5": "ad63e3236acfbfa00af77ac3b4b38c45", - "protein_translation": "MSQILLQPANAMITLENVNKWYGQFHVLKNINLTVQPGERIVLCGPSGSGKSTTIRCINHLEEHQQGRIVVDGIELNEDIRNIERVRQEVGMVFQHFNLFPHLTVLQNCTLAPIWVRKMPKKEAEDLAVHYLERVRIAEHAHKFPGQISGGQQQRVAIARSLCMKPKIMLFDEPTSALDPEMVKEVLDTMIGLAQSGMTMLCVTHEMGFARTVADRVIFMDRGEIVEQAAPDEFFAHPKSERTRAFLSQVIH", - "protein_translation_length": 252, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417738.4" - ], - [ - "gene_synonym", - "JW5710" - ], - [ - "gene_synonym", - "yrdA" - ], - [ - "gene_synonym", - "GI:90111568" - ], - [ - "gene_synonym", - "EcoGene:EG12838" - ], - [ - "gene_synonym", - "b3279" - ], - [ - "gene_synonym", - "GeneID:947775" - ], - [ - "gene_synonym", - "ASAP:ABE-0010759" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9W9" - ], - [ - "gene_synonym", - "ECK3266" - ] - ], - "dna_sequence": "ATGTCTGATGTTTTACGCCCATACCGCGATCTTTTTCCACAAATCGGTCAGCGCGTAATGATCGACGATAGCAGTGTCGTGATTGGTGACGTTCGTCTGGCTGATGATGTGGGGATCTGGCCGCTCGTTGTGATTCGTGGAGATGTACATTATGTACAGATCGGAGCACGCACCAATATCCAGGATGGCAGTATGTTGCATGTCACTCATAAATCCTCGTACAACCCAGATGGCAACCCATTAACCATTGGCGAAGATGTCACTGTTGGTCACAAGGTGATGCTCCACGGCTGCACCATTGGCAATCGAGTTTTGGTTGGGATGGGCTCAATTTTACTTGATGGCGCAATAGTAGAAGATGATGTGATGATTGGTGCGGGTAGTCTGGTCCCACAAAATAAACGGCTGGAGAGCGGATATCTGTATCTCGGTAGCCCCGTCAAACAGATCCGCCCGTTAAGTGATGAAGAGAAGGCTGGGTTACGCTATTCCGCGAATAATTACGTGAAATGGAAGGACGAATATCTGGATCAGGGTAACCAGACCCAGCCTTGA", - "dna_sequence_length": 555, - "functions": [ - "bacterial transferase hexapeptide domain protein" - ], - "id": "CDS_3217", - "location": [ - [ - "NC_000913", - 3429236, - "+", - 555 - ] - ], - "md5": "208214c58b3ce26d2c2df7902a589d2a", - "parent_gene": "", - "protein_md5": "7a67a861e23485adf7cdf01e617b1dfa", - "protein_translation": "MSDVLRPYRDLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAGLRYSANNYVKWKDEYLDQGNQTQP", - "protein_translation_length": 184, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131161" - ], - [ - "gene_synonym", - "GeneID:947774" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45795" - ], - [ - "gene_synonym", - "b3280" - ], - [ - "gene_synonym", - "JW3241" - ], - [ - "gene_synonym", - "EcoGene:EG12839" - ], - [ - "gene_synonym", - "yrdB" - ], - [ - "gene_synonym", - "ASAP:ABE-0010761" - ], - [ - "gene_synonym", - "ECK3267" - ], - [ - "gene_synonym", - "NP_417739.1" - ] - ], - "dna_sequence": "GTGAATCAGGCCATCCAGTTTCCGGACAGGGAAGAGTGGGACGAGAATAAAAAATGTGTATGTTTTCCCGCTCTCGTGAATGGTATGCAACTGACATGCGCGATCTCTGGCGAGAGTCTGGCGTATCGCTTTACTGGAGATACGCCAGAACAGTGGTTAGCGAGTTTTCGTCAGCATCGCTGGGACCTGGAAGAAGAAGCGGAAAACTTAATTCAGGAACAAAGTGAAGATGATCAAGGCTGGGTCTGGTTACCCTGA", - "dna_sequence_length": 258, - "functions": [ - "DUF1488 family protein" - ], - "id": "CDS_3218", - "location": [ - [ - "NC_000913", - 3430023, - "-", - 258 - ] - ], - "md5": "c040cb381e3e4d15876616a6c7db9bf8", - "parent_gene": "", - "protein_md5": "a4cace8ccd1970b7fd2f6065f3c8780b", - "protein_translation": "MNQAIQFPDREEWDENKKCVCFPALVNGMQLTCAISGESLAYRFTGDTPEQWLASFRQHRWDLEEEAENLIQEQSEDDQGWVWLP", - "protein_translation_length": 85, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947776" - ], - [ - "gene_synonym", - "NP_417740.1" - ], - [ - "gene_synonym", - "EcoGene:EG10077" - ], - [ - "gene_synonym", - "b3281" - ], - [ - "gene_synonym", - "JW3242" - ], - [ - "gene_synonym", - "GI:16131162" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15770" - ], - [ - "gene_synonym", - "aroE" - ], - [ - "gene_synonym", - "ASAP:ABE-0010763" - ], - [ - "gene_synonym", - "ECK3268" - ] - ], - "dna_sequence": "ATGGAAACCTATGCTGTTTTTGGTAATCCGATAGCCCACAGCAAATCGCCATTCATTCATCAGCAATTTGCTCAGCAACTGAATATTGAACATCCCTATGGGCGCGTGTTGGCACCCATCAATGATTTCATCAACACACTGAACGCTTTCTTTAGTGCTGGTGGTAAAGGTGCGAATGTGACGGTGCCTTTTAAAGAAGAGGCTTTTGCCAGAGCGGATGAGCTTACTGAACGGGCAGCGTTGGCTGGTGCTGTTAATACCCTCATGCGGTTAGAAGATGGACGCCTGCTGGGTGACAATACCGATGGTGTAGGCTTGTTAAGCGATCTGGAACGTCTGTCTTTTATCCGCCCTGGTTTACGTATTCTGCTTATCGGCGCTGGTGGAGCATCTCGCGGCGTACTACTGCCACTCCTTTCCCTGGACTGTGCGGTGACAATAACTAATCGGACGGTATCCCGCGCGGAAGAGTTGGCTAAATTGTTTGCGCACACTGGCAGTATTCAGGCGTTGAGTATGGACGAACTGGAAGGTCATGAGTTTGATCTCATTATTAATGCAACATCCAGTGGCATCAGTGGTGATATTCCGGCGATCCCGTCATCGCTCATTCATCCAGGCATTTATTGCTATGACATGTTCTATCAGAAAGGAAAAACTCCTTTTCTGGCATGGTGTGAGCAGCGAGGCTCAAAGCGTAATGCTGATGGTTTAGGAATGCTGGTGGCACAGGCGGCTCATGCCTTTCTTCTCTGGCACGGTGTTCTGCCTGACGTAGAACCAGTTATAAAGCAATTGCAGGAGGAATTGTCCGCGTGA", - "dna_sequence_length": 819, - "functions": [ - "dehydroshikimate reductase, NAD(P)-binding" - ], - "id": "CDS_3219", - "location": [ - [ - "NC_000913", - 3430838, - "-", - 819 - ] - ], - "md5": "53ff7256441cb875571b9663be9dc74d", - "parent_gene": "", - "protein_md5": "21789729ea9a46ac1229042bf1736709", - "protein_translation": "METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVTVPFKEEAFARADELTERAALAGAVNTLMRLEDGRLLGDNTDGVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPVIKQLQEELSA", - "protein_translation_length": 272, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tsaC" - ], - [ - "gene_synonym", - "EcoGene:EG12840" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45748" - ], - [ - "gene_synonym", - "b3282" - ], - [ - "gene_synonym", - "JW3243" - ], - [ - "gene_synonym", - "GeneID:947783" - ], - [ - "gene_synonym", - "NP_417741.1" - ], - [ - "gene_synonym", - "GI:16131163" - ], - [ - "gene_synonym", - "ECK3269" - ], - [ - "gene_synonym", - "rimN" - ], - [ - "gene_synonym", - "yrdC" - ], - [ - "gene_synonym", - "ASAP:ABE-0010766" - ] - ], - "dna_sequence": "GTGAATAATAACCTGCAAAGAGACGCTATCGCAGCTGCGATAGATGTTCTCAATGAAGAACGTGTCATCGCCTATCCAACGGAAGCCGTTTTCGGTGTTGGGTGCGATCCTGATAGCGAAACAGCAGTGATGCGACTGTTGGAGTTAAAACAGCGTCCGGTTGATAAGGGGCTGATTTTAATCGCAGCAAATTACGAGCAGCTTAAACCCTATATTGATGACACCATGTTGACTGACGTGCAGCGTGAAACCATTTTTTCCCGCTGGCCAGGTCCTGTCACCTTTGTCTTTCCCGCGCCTGCGACAACACCGCGCTGGTTGACGGGCCGCTTTGATTCGCTTGCTGTACGAGTCACCGACCATCCGTTGGTGGTTGCTTTGTGCCAGGCTTATGGTAAACCGCTGGTTTCTACCAGTGCCAACTTGAGTGGATTGCCACCTTGTCGAACAGTAGACGAAGTTCGCGCACAATTTGGCGCGGCGTTCCCGGTTGTGCCTGGTGAAACGGGGGGGCGTTTAAATCCTTCAGAAATCCGCGATGCCCTGACGGGTGAACTGTTTCGACAGGGGTAA", - "dna_sequence_length": 573, - "functions": [ - "tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein, threonine-dependent ADP-forming ATPase" - ], - "id": "CDS_3220", - "location": [ - [ - "NC_000913", - 3431415, - "-", - 573 - ] - ], - "md5": "5ceb6f3f05c11bba06dad03c0acbb288", - "parent_gene": "", - "protein_md5": "c77abacf02d2fb3134205727daa19224", - "protein_translation": "MNNNLQRDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDVQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFPVVPGETGGRLNPSEIRDALTGELFRQG", - "protein_translation_length": 190, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12841" - ], - [ - "gene_synonym", - "b3283" - ], - [ - "gene_synonym", - "GeneID:947782" - ], - [ - "gene_synonym", - "yrdD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45771" - ], - [ - "gene_synonym", - "ASAP:ABE-0010768" - ], - [ - "gene_synonym", - "GI:49176335" - ], - [ - "gene_synonym", - "JW5949" - ], - [ - "gene_synonym", - "ECK3270" - ], - [ - "gene_synonym", - "YP_026210.1" - ] - ], - "dna_sequence": "ATGGCGAAATCAGCACTGTTCACGGTGCGTAATAATGAGTCCTGCCCAAAGTGCGGGGCTGAACTGGTTATTCGATCCGGGAAACACGGTCCGTTTCTTGGATGCTCACAGTATCCGGCGTGTGACTACGTCCGTCCTCTGAAATCTTCAGCGGATGGACATATCGTCAAAGTTCTGGAGGGGCAGGTTTGCCCTGCATGTGGCGCAAATCTGGTATTACGCCAGGGACGCTTTGGTATGTTTATTGGTTGCATTAACTACCCTGAATGCGAACATACCGAACTTATCGATAAACCGGACGAAACAGCAATTACATGCCCCCAATGTCGGACGGGCCATCTGGTCCAGCGCCGCTCCCGTTATGGCAAAACATTTCACTCTTGTGATCGCTACCCGGAGTGTCAATTTGCCATTAACTTCAAACCCATAGCTGGAGAATGCCCTGAGTGTCATTATCCGCTACTCATCGAAAAGAAAACCGCGCAGGGTGTAAAACACTTTTGTGCCAGTAAACAATGTGGAAAGCCGGTTTCGGCGGAATAA", - "dna_sequence_length": 543, - "functions": [ - "ssDNA-binding protein, function unknown" - ], - "id": "CDS_3221", - "location": [ - [ - "NC_000913", - 3431962, - "-", - 543 - ] - ], - "md5": "9e6cb955daf74403dd49d8337cfc912c", - "parent_gene": "", - "protein_md5": "061f2c854f71fb2933858f32bac9bd55", - "protein_translation": "MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYVRPLKSSADGHIVKVLEGQVCPACGANLVLRQGRFGMFIGCINYPECEHTELIDKPDETAITCPQCRTGHLVQRRSRYGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKTAQGVKHFCASKQCGKPVSAE", - "protein_translation_length": 180, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A828" - ], - [ - "gene_synonym", - "EcoGene:EG11605" - ], - [ - "gene_synonym", - "ASAP:ABE-0010770" - ], - [ - "gene_synonym", - "GI:16131165" - ], - [ - "gene_synonym", - "b3284" - ], - [ - "gene_synonym", - "JW3245" - ], - [ - "gene_synonym", - "GeneID:947781" - ], - [ - "gene_synonym", - "smg" - ], - [ - "gene_synonym", - "ECK3271" - ], - [ - "gene_synonym", - "NP_417743.1" - ] - ], - "dna_sequence": "ATGTTCGACGTACTAATGTATTTGTTTGAAACCTATATTCACACAGAAGCTGAGTTGCGTGTGGATCAAGACAAACTTGAACAGGATCTTACCGACGCAGGTTTTGAGCGAGAAGATATCTACAATGCCCTGCTATGGCTGGAAAAACTTGCTGATTATCAGGAAGGGTTGGCAGAACCGATGCAACTGGCCTCGGATCCTCTCTCCATGCGTATTTATACACCGGAAGAGTGTGAACGACTGGATGCCAGCTGCCGTGGGTTTCTGCTTTTCCTTGAGCAGATTCAGGTGCTCAACCTTGAAACTCGTGAAATGGTGATAGAGCGAGTGCTCGCGCTGGATAACGCAGAGTTCGAACTGGATGATCTGAAATGGGTGATCCTGATGGTGTTGTTCAATATTCCGGGCTGCGAAAATGCGTACCAGCAAATGGAAGAATTACTCTTTGAAGTGAATGAAGGTATGCTGCATTAA", - "dna_sequence_length": 474, - "functions": [ - "DUF494 family putative periplasmic protein" - ], - "id": "CDS_3222", - "location": [ - [ - "NC_000913", - 3432464, - "-", - 474 - ] - ], - "md5": "3ef7b1d6e7c36e0f98f9e693553b699b", - "parent_gene": "", - "protein_md5": "b04c6c392fe494e9a01eddae341e7995", - "protein_translation": "MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFEREDIYNALLWLEKLADYQEGLAEPMQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLETREMVIERVLALDNAEFELDDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH", - "protein_translation_length": 157, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11604" - ], - [ - "gene_synonym", - "b4473" - ], - [ - "gene_synonym", - "ASAP:ABE-0174103" - ], - [ - "gene_synonym", - "JW5708" - ], - [ - "gene_synonym", - "GeneID:2847708" - ], - [ - "gene_synonym", - "GI:49176336" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30852" - ], - [ - "gene_synonym", - "ECK3272" - ], - [ - "gene_synonym", - "smf" - ], - [ - "gene_synonym", - "YP_026211.1" - ] - ], - "dna_sequence": "ATGGTCGATACAGAAATTTGGCTGCGTTTAATGAGTATCAGCAGCTTGTACGGCGATGATATGGTCCGTATCGCTCACTGGGTGGCAAAACAGTCGCATATTGATGCGGTTGTATTGCAGCAAACAGGGCTTACATTGCGGCAGGCACAACGCTTTCTTTCATTTCCACGAAAGAGTATCGAAAGCTCACTTTGTTGGTTGGAGCAACCCAACCATCATTTAATTCCTGCGGACAGCGAATTTTATCCTCCTCAACTTCTGGCGACGACAGATTACCCCGGCGCACTGTTTGTTGAAGGAGAACTGCACGCGCTGCATTCATTTCAGCTTGCCGTAGTGGGGAGTCGGGCGCATTCATGGTATGGCGAGCGATGGGGACGATTATTTTGCGAAACTCTGGCGACGCGTGGAGTGACAATTACGAGTGGACTGGCGCGTGGAATCGATGGTGTAGCGCATAAAGCAGCCTTACAGGTAAATGGCGTCAGCATTGCTGTATTGGGGAATGGACTTAATACCATTCATCCCCGCCGTCATGCCCGACTGGCTGCCAGTCTGCTTGAACAGGGGGGCGCTCTCGTCTCGGAATTTCCCCTCGATGTTCCACCCCTTGCTTACAATTTCCCACGAAGAAATCGCATTATCAGTGGTCTAAGTAAAGGTGTACTGGTGGTGGAAGCGGCTTTGCGTAGTGGTTCGCTGGTGACAGCACGTTGTGCGCTTGAGCAGGGGCGAGAAGTTTTTGCCTTGCCAGGTCCAATAGGGAATCCGGGAAGCGAAGGGCCTCACTGGTTAATAAAACAAGGTGCGATTCTTGTGACGGAACCGGAAGAAATTCTGGAAAACTTGCAATTTGGATTGCACTGGTTGCCAGACGCCCCTGAAAATTCATTTTATTCACCAGATCAGCAAGACGTGGCATTGCCATTTCCTGAGCTCCTGGCTAACGTAGGAGATGAGGTAACACCTGTTGACGTCGTCGCTGAACGTGCCGGCCAACCTGTGCCAGAGGTAGTTACTCAACTACTCGAACTGGAGTTAGCAGGATGGATCGCAGCTGTACCCGGCGGCTATGTCCGATTGAGGAGGGCATGCCATGTTCGACGTACTAATGTATTTGTTTGA", 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"NP_417745.1" - ], - [ - "gene_synonym", - "fms" - ], - [ - "gene_synonym", - "GeneID:947780" - ], - [ - "gene_synonym", - "b3287" - ], - [ - "gene_synonym", - "ASAP:ABE-0010779" - ], - [ - "gene_synonym", - "ECK3273" - ], - [ - "gene_synonym", - "def" - ] - ], - "dna_sequence": "ATGTCAGTTTTGCAAGTGTTACATATTCCGGACGAGCGGCTTCGCAAAGTTGCTAAACCGGTAGAAGAAGTGAATGCAGAAATTCAGCGTATCGTCGATGATATGTTCGAGACGATGTACGCAGAAGAAGGTATTGGCCTGGCGGCAACCCAGGTTGATATCCATCAACGTATCATTGTTATTGATGTTTCGGAAAACCGTGACGAACGGCTAGTGTTAATCAATCCAGAGCTTTTAGAAAAAAGCGGCGAAACAGGCATTGAAGAAGGTTGCCTGTCGATCCCTGAACAACGTGCTTTAGTGCCGCGCGCAGAGAAAGTTAAAATTCGCGCCCTTGACCGCGACGGTAAACCATTTGAACTGGAAGCAGACGGTCTGTTAGCCATCTGTATTCAGCATGAGATGGATCACCTGGTCGGCAAACTGTTTATGGATTATCTGTCACCGCTGAAACAACAACGTATTCGTCAGAAAGTTGAAAAACTGGATCGTCTGAAAGCCCGGGCTTAA", - "dna_sequence_length": 510, - "functions": [ - "peptide deformylase" - ], - "id": "CDS_3224", - "location": [ - [ - "NC_000913", - 3433690, - "+", - 510 - ] - ], - "md5": "cd0f41c439f42713866e18f9c364a00c", - "parent_gene": "", - "protein_md5": "6edaccfd0cf997a74924ac8da9f6b01f", - "protein_translation": "MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA", - "protein_translation_length": 169, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3288" - ], - [ - "gene_synonym", - "JW3249" - ], - [ - "gene_synonym", - "EcoGene:EG11268" - ], - [ - "gene_synonym", - "yhdD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23882" - ], - [ - "gene_synonym", - "fmt" - ], - [ - "gene_synonym", - "GI:16131167" - ], - [ - "gene_synonym", - "GeneID:947779" - ], - [ - "gene_synonym", - "ASAP:ABE-0010781" - ], - [ - "gene_synonym", - "NP_417746.1" - ], - [ - "gene_synonym", - "ECK3274" - ] - ], - "dna_sequence": "GTGTCAGAATCACTACGTATTATTTTTGCGGGTACACCTGACTTTGCAGCGCGTCATCTCGACGCGCTGTTGTCTTCTGGTCATAACGTCGTTGGCGTGTTCACCCAGCCAGACCGACCGGCAGGACGCGGTAAAAAACTGATGCCCAGCCCGGTTAAAGTTCTGGCTGAGGAAAAAGGTCTGCCCGTTTTTCAACCTGTTTCCCTGCGTCCACAAGAAAACCAGCAACTGGTCGCCGAACTGCAGGCTGATGTTATGGTCGTCGTCGCCTATGGTTTAATTCTGCCGAAAGCAGTGCTGGAGATGCCGCGTCTTGGCTGTATCAACGTTCATGGTTCACTGCTGCCACGCTGGCGCGGTGCTGCACCAATCCAACGCTCACTATGGGCGGGTGATGCAGAAACTGGTGTGACCATTATGCAAATGGATGTCGGTTTAGACACCGGTGATATGCTCTATAAGCTCTCCTGCCCGATTACTGCAGAAGATACCAGTGGTACGCTGTACGACAAGCTGGCAGAGCTTGGCCCACAAGGGCTTATCACCACGTTGAAACAACTGGCAGACGGCACGGCGAAACCAGAAGTTCAGGACGAAACTCTTGTCACTTACGCCGAGAAGTTGAGTAAAGAAGAAGCGCGTATTGACTGGTCACTTTCGGCAGCACAGCTTGAACGCTGCATTCGCGCTTTCAATCCATGGCCAATGAGCTGGCTGGAAATTGAAGGACAGCCGGTTAAAGTCTGGAAAGCATCGGTCATTGATACGGCAACCAACGCTGCACCAGGAACGATCCTTGAAGCCAACAAACAAGGCATTCAGGTTGCGACTGGTGATGGCATCCTGAACCTGCTCTCGTTACAACCTGCGGGTAAGAAAGCGATGAGCGCGCAAGACCTCCTGAACTCTCGTCGGGAATGGTTTGTTCCGGGCAACCGTCTGGTCTGA", - "dna_sequence_length": 948, - "functions": [ - "10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase" - ], - "id": "CDS_3225", - "location": [ - [ - "NC_000913", - 3434214, - "+", - 948 - ] - ], - "md5": "f40d306846d2428880566f87627108f2", - "parent_gene": "", - "protein_md5": "9e9ed0b171c702bc32b87b9fa84028bb", - "protein_translation": "MSESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIEGQPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGNRLV", - "protein_translation_length": 315, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rsmB" - ], - [ - "gene_synonym", - "b3289" - ], - [ - "gene_synonym", - "ASAP:ABE-0010785" - ], - [ - "gene_synonym", - "GeneID:947789" - ], - [ - "gene_synonym", - "rrmB" - ], - [ - "gene_synonym", - "yhdB" - ], - [ - "gene_synonym", - "fmv" - ], - [ - "gene_synonym", - "sun" - ], - [ - "gene_synonym", - "fmu" - ], - [ - "gene_synonym", - "GI:16131168" - ], - [ - "gene_synonym", - "EcoGene:EG12163" - ], - [ - "gene_synonym", - "JW3250" - ], - [ - "gene_synonym", - "NP_417747.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36929" - ], - [ - "gene_synonym", - "ECK3275" - ] - ], - "dna_sequence": "ATGAAAAAACAACGTAATTTACGTAGCATGGCGGCCCAGGCCGTTGAACAAGTCGTCGAGCAAGGGCAATCATTAAGCAACATTCTGCCACCGCTCCAGCAAAAAGTTTCCGATAAAGACAAAGCACTTCTTCAAGAGTTGTGCTTTGGCGTACTGCGTACGCTTTCGCAGTTAGACTGGCTGATTAATAAGTTAATGGCCCGTCCGATGACCGGCAAACAGCGGACCGTGCATTACCTGATTATGGTTGGTTTGTATCAACTGCTTTATACCCGCATTCCACCTCATGCTGCGCTGGCTGAAACGGTTGAAGGCGCTATCGCAATTAAGCGTCCGCAACTTAAAGGGTTGATAAACGGTGTATTACGCCAGTTCCAGCGTCAGCAAGAAGAGTTATTAGCCGAGTTTAATGCCAGTGATGCACGTTATCTGCATCCTTCCTGGTTGCTGAAGCGTCTGCAAAAAGCGTATCCAGAGCAGTGGCAATCCATCGTCGAAGCCAATAACCAGCGTCCGCCAATGTGGCTGCGTATTAATCGTACGCATCATTCCCGCGACAGCTGGCTTGCATTGCTGGATGAAGCAGGAATGAAAGGTTTCCCGCATGCGGATTACCCTGATGCTGTACGTCTGGAAACACCTGCACCTGTTCATGCGCTACCTGGTTTTGAAGACGGATGGGTTACCGTTCAGGATGCATCAGCACAAGGTTGCATGACCTGGCTTGCGCCACAAAACGGTGAACACATTTTGGATCTTTGTGCCGCCCCCGGCGGTAAAACAACGCATATCCTTGAGGTGGCACCAGAAGCGCAGGTTGTTGCGGTTGATATCGACGAACAGCGCCTCTCTCGGGTTTACGACAATTTAAAACGCCTTGGTATGAAGGCGACCGTGAAACAAGGTGATGGCCGTTACCCTTCTCAATGGTGTGGCGAGCAACAGTTTGATCGCATTTTATTAGATGCGCCTTGTTCAGCAACCGGTGTGATTCGTCGCCATCCAGATATTAAATGGTTACGTCGCGATCGCGATATCCCGGAACTCGCGCAATTGCAGTCTGAAATTCTCGACGCCATTTGGCCGCATTTAAAAACCGGTGGAACTCTGGTCTATGCCACCTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCAGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGA", 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"NP_417748.1" - ], - [ - "gene_synonym", - "sapG" - ], - [ - "gene_synonym", - "b3290" - ], - [ - "gene_synonym", - "ASAP:ABE-0010787" - ], - [ - "gene_synonym", - "JW3251" - ], - [ - "gene_synonym", - "EcoGene:EG11019" - ], - [ - "gene_synonym", - "ECK3276" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGI8" - ] - ], - "dna_sequence": "ATGAAAATTATCATTCTGGGTGCCGGCCAGGTTGGCGGCACACTGGCGGAAAACCTGGTTGGCGAGAACAACGATATTACTGTTGTCGATACCAACGGTGAGCGTCTGCGGACCTTACAGGATAAATTTGACCTGCGGGTCGTGCAGGGGCATGGCTCTCATCCACGCGTATTGCGGGAGGCAGGTGCCGACGACGCCGATATGCTGGTTGCTGTAACCAGTTCAGATGAAACCAATATGGTTGCCTGCCAGGTAGCCTACTCACTTTTCAACACCCCTAATCGCATCGCTCGTATCCGCTCACCAGACTACGTGCGCGATGCCGATAAGCTATTTCATTCAGATGCTGTGCCGATTGATCATCTGATCGCACCAGAGCAGTTGGTTATCGATAATATTTACCGACTGATTGAGTATCCCGGCGCATTGCAGGTGGTGAACTTCGCTGAGGGTAAAGTCAGCCTGGCTGTGGTTAAAGCCTATTATGGCGGCCCGCTGATTGGTAATGCACTTTCGACCATGCGCGAACATATGCCACATATCGATACTCGTGTGGCAGCAATTTTCCGCCACGATCGCCCCATTCGTCCGCAAGGTTCGACCATTGTTGAAGCTGGTGATGAAGTGTTCTTTATTGCCGCTTCACAGCATATCCGCGCGGTGATGAGTGAATTACAGCGACTGGAAAAACCGTATAAGCGGATCATGCTGGTTGGTGGCGGTAATATCGGTGCAGGGCTGGCGCGTCGTCTGGAAAAAGATTACAGCGTTAAACTCATCGAACGTAATCAGCAGCGCGCTGCCGAACTGGCGGAAAAGTTACAGAATACGATCGTCTTTTTTGGTGATGCGTCGGATCAAGAACTACTGGCCGAAGAACATATCGATCAAGTTGATCTGTTTATTGCCGTCACCAACGATGACGAGGCCAATATCATGTCCGCCATGCTTGCCAAACGTATGGGTGCGAAAAAGGTGATGGTATTGATCCAGCGTCGCGCTTATGTGGATCTGGTTCAGGGGAGCGTTATCGATATTGCGATTTCACCACAACAAGCAACTATTTCTGCGTTGCTTAGCCATGTGCGAAAAGCAGATATTGTTGGTGTTTCCTCATTGCGCCGCGGCGTAGCAGAAGCTATTGAAGCCGTTGCTCACGGTGATGAAAGCACCTCACGCGTTGTCGGCAGAGTCATTGACGAAATCAAGCTACCGCCAGGAACGATTATTGGAGCGGTGGTACGTGGAAACGACGTGATGATTGCCAATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCCTCACAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAA", 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"gene_synonym", - "GeneID:947787" - ], - [ - "gene_synonym", - "b3291" - ], - [ - "gene_synonym", - "EcoGene:EG11180" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A742" - ], - [ - "gene_synonym", - "JW3252" - ], - [ - "gene_synonym", - "NP_417749.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010790" - ], - [ - "gene_synonym", - "ECK3277" - ], - [ - "gene_synonym", - "mscL" - ] - ], - "dna_sequence": "ATGAGCATTATTAAAGAATTTCGCGAATTTGCGATGCGCGGGAACGTGGTGGATTTGGCGGTGGGTGTCATTATCGGTGCGGCATTCGGGAAGATTGTCTCTTCACTGGTTGCCGATATCATCATGCCTCCTCTGGGCTTATTAATTGGCGGGATCGATTTTAAACAGTTTGCTGTCACGCTACGCGATGCGCAGGGGGATATCCCTGCTGTTGTGATGCATTACGGTGTCTTCATTCAAAACGTCTTTGATTTTCTGATTGTGGCCTTTGCCATCTTTATGGCGATTAAGCTAATCAACAAACTGAATCGGAAAAAAGAAGAACCAGCAGCCGCACCTGCACCAACTAAAGAAGAAGTATTACTGACAGAAATTCGTGATTTGCTGAAAGAGCAGAATAACCGCTCTTAA", - "dna_sequence_length": 411, - "functions": [ - "mechanosensitive channel protein, high conductance" - ], - "id": "CDS_3228", - "location": [ - [ - "NC_000913", - 3438024, - "+", - 411 - ] - ], - "md5": "f56713f4ec5032acd55d5177e0e3b3d4", - "parent_gene": "", - "protein_md5": "9a0b9a6c80c111b01765f49bf696bf99", - "protein_translation": "MSIIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPPLGLLIGGIDFKQFAVTLRDAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKLNRKKEEPAAAPAPTKEEVLLTEIRDLLKEQNNRS", - "protein_translation_length": 136, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4550" - ], - [ - "gene_synonym", - "ASAP:ABE-0285071" - ], - [ - "gene_synonym", - "YP_588467.1" - ], - [ - "gene_synonym", - "GeneID:1450289" - ], - [ - "gene_synonym", - "EcoGene:EG11968" - ], - [ - "gene_synonym", - "yhdL" - ], - [ - "gene_synonym", - "ECK3278" - ], - [ - "gene_synonym", - "JW3253" - ], - [ - "gene_synonym", - "GI:94541124" - ], - [ - "gene_synonym", - "arfA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36675" - ] - ], - "dna_sequence": "ATGAGTCGATATCAGCATACTAAAGGGCAGATAAAGGATAATGCGATAGAAGCATTACTACATGATCCCTTATTCCGACAGCGCGTAGAGAAAAATAAGAAGGGGAAAGGCAGTTACATGCGAAAAGGAAAACATGGCAATCGGGGGAACTGGGAGGCCAGTGGCAAGAAAGTAAATCACTTTTTTACCACTGGTCTTCTGCTTTCAGGCGCTTGTTAA", - "dna_sequence_length": 219, - "functions": [ - "alternate ribosome-rescue factor A" - ], - "id": "CDS_3229", - "location": [ - [ - "NC_000913", - 3438649, - "-", - 219 - ] - ], - "md5": "e7e2af34c56ac8c9b7c39041247d65d4", - "parent_gene": "", - "protein_md5": "042540b999f41ce72ccf06399fb32492", - "protein_translation": "MSRYQHTKGQIKDNAIEALLHDPLFRQRVEKNKKGKGSYMRKGKHGNRGNWEASGKKVNHFFTTGLLLSGAC", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131171" - ], - [ - "gene_synonym", - "GeneID:947786" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACS5" - ], - [ - "gene_synonym", - "zntR" - ], - [ - "gene_synonym", - "b3292" - ], - [ - "gene_synonym", - "yhdM" - ], - [ - "gene_synonym", - "EcoGene:EG11969" - ], - [ - "gene_synonym", - "ECK3279" - ], - [ - "gene_synonym", - "ASAP:ABE-0010793" - ], - [ - "gene_synonym", - "NP_417751.1" - ], - [ - "gene_synonym", - "JW3254" - ] - ], - "dna_sequence": "ATGTATCGCATTGGTGAGCTGGCAAAAATGGCGGAAGTAACACCCGACACGATTCGTTATTACGAAAAACAGCAGATGATGGAGCATGAAGTGCGTACTGAAGGTGGGTTTCGCCTATATACCGAAAGCGATCTCCAGCGATTGAAATTTATCCGCCATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACGGATAGCCGAGTTGCAGAGTATGCAGCGTTCCTTGCAACGCCTTAACGATGCCTGTTGTGGGACTGCTCATAGCAGTGTTTATTGTTCGATTCTTGAAGCTCTTGAACAAGGGGCGAGTGGCGTTAAGAGTGGTTGTTGA", - "dna_sequence_length": 426, - "functions": [ - "zntA gene transcriptional activator" - ], - "id": "CDS_3230", - "location": [ - [ - "NC_000913", - 3439130, - "-", - 426 - ] - ], - "md5": "a9fb85f8e2c444b6881329fcb303ab96", - "parent_gene": "", - "protein_md5": "e97ebe0750cea743d147d9f5f771bfc2", - "protein_translation": "MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESDLQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQSMQRSLQRLNDACCGTAHSSVYCSILEALEQGASGVKSGC", - "protein_translation_length": 141, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131172" - ], - [ - "gene_synonym", - "GeneID:947785" - ], - [ - "gene_synonym", - "EcoGene:EG11970" - ], - [ - "gene_synonym", - "NP_417752.1" - ], - [ - "gene_synonym", - "b3293" - ], - [ - "gene_synonym", - "yhdN" - ], - [ - "gene_synonym", - "ASAP:ABE-0010795" - ], - [ - "gene_synonym", - "JW3255" - ], - [ - "gene_synonym", - "ECK3280" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36677" - ] - ], - "dna_sequence": "ATGTGGTTACTTGACCAGTGGGCAGAGCGCCATATAGCAGAAGCGCAAGCGAAAGGTGAGTTTGATAACCTGGCAGGTAGCGGCGAACCATTGATACTGGATGATGATTCTCACGTGCCACCGGAATTACGTGCGGGGTATCGCTTGCTGAAGAATGCCGGTTGCTTACCGCCAGAACTTGAGCAACGGAGAGAAGCAATTCAGCTTCTGGATATTCTCAAAGGTATCCGTCACGATGATCCGCAATATCAAGAGGTTAGCCGTCGATTGTCATTACTGGAATTGAAGCTGCGACAAGCTGGATTGAGTACCGATTTTTTACGCGGCGATTATGCTGACAAGTTGTTGGACAAAATCAACGATAACTAG", - "dna_sequence_length": 369, - "functions": [ - "DUF1992 family protein" - ], - "id": "CDS_3231", - "location": [ - [ - "NC_000913", - 3439509, - "-", - 369 - ] - ], - "md5": "1949cd584003ff90ecdb9709ee058d90", - "parent_gene": "", - "protein_md5": "1d203ab277962fd871b609851310cbe3", - "protein_translation": "MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDDPQYQEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKINDN", - "protein_translation_length": 122, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131173" - ], - [ - "gene_synonym", - "EcoGene:EG10878" - ], - [ - "gene_synonym", - "GeneID:947784" - ], - [ - "gene_synonym", - "b3294" - ], - [ - "gene_synonym", - "NP_417753.1" - ], - [ - "gene_synonym", - "rplQ" - ], - [ - "gene_synonym", - "JW3256" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG44" - ], - [ - "gene_synonym", - "ECK3281" - ], - [ - "gene_synonym", - "ASAP:ABE-0010799" - ] - ], - "dna_sequence": "ATGCGCCATCGTAAGAGTGGTCGTCAACTGAACCGCAACAGCAGCCATCGCCAGGCTATGTTCCGCAATATGGCAGGTTCACTGGTTCGTCATGAAATCATCAAGACGACTCTGCCTAAAGCGAAAGAGCTGCGCCGCGTAGTTGAGCCGCTGATTACTCTTGCCAAGACTGATAGCGTTGCTAATCGTCGTCTGGCATTCGCCCGTACTCGTGATAACGAGATCGTGGCAAAACTGTTTAACGAACTGGGCCCGCGTTTCGCGAGCCGTGCCGGTGGTTACACTCGTATTCTGAAGTGTGGCTTCCGTGCAGGCGACAACGCGCCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAA", - "dna_sequence_length": 384, - "functions": [ - "50S ribosomal subunit protein L17" - ], - "id": "CDS_3232", - "location": [ - [ - "NC_000913", - 3439999, - "-", - 384 - ] - ], - "md5": "a42316f7477db498de4703362f4333f9", - "parent_gene": "", - "protein_md5": "4363326f335edc2987d8e609b33aa633", - "protein_translation": "MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEKAEAAAE", - "protein_translation_length": 127, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "pez" - ], - [ - "gene_synonym", - "GI:16131174" - ], - [ - "gene_synonym", - "EcoGene:EG10893" - ], - [ - "gene_synonym", - "GeneID:947794" - ], - [ - "gene_synonym", - "b3295" - ], - [ - "gene_synonym", - "sez" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7Z4" - ], - [ - "gene_synonym", - "JW3257" - ], - [ - "gene_synonym", - "rpoA" - ], - [ - "gene_synonym", - "ECK3282" - ], - [ - "gene_synonym", - "phs" - ], - [ - "gene_synonym", - "NP_417754.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010802" - ] - ], - "dna_sequence": 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"gene_synonym", - "NP_417755.1" - ], - [ - "gene_synonym", - "sud" - ], - [ - "gene_synonym", - "ECK3283" - ], - [ - "gene_synonym", - "ASAP:ABE-0010805" - ], - [ - "gene_synonym", - "ramA" - ], - [ - "gene_synonym", - "JW3258" - ] - ], - "dna_sequence": "ATGGCAAGATATTTGGGTCCTAAGCTCAAGCTGAGCCGTCGTGAGGGCACCGACTTATTCCTTAAGTCTGGCGTTCGCGCGATCGATACCAAGTGTAAAATTGAACAAGCTCCTGGCCAGCACGGTGCGCGTAAACCGCGTCTGTCTGACTATGGTGTGCAGTTGCGTGAAAAGCAAAAAGTTCGCCGTATCTATGGTGTGCTGGAGCGTCAGTTCCGTAACTACTACAAAGAAGCAGCACGTCTGAAAGGCAACACCGGTGAAAACCTGTTGGCTCTGCTGGAAGGTCGTCTGGACAACGTTGTATACCGTATGGGCTTCGGTGCCACTCGTGCAGAAGCACGTCAGCTGGTTAGCCATAAAGCAATTATGGTAAACGGTCGTGTTGTTAACATCGCTTCTTATCAGGTTAGTCCGAATGACGTTGTAAGCATTCGTGAGAAAGCGAAGAAGCAGTCTCGCGTGAAAGCCGCTCTGGAGCTGGCTGAGCAGCGTGAAAAGCCAACCTGGCTGGAAGTTGATGCTGGCAAGATGGAAGGTACGTTTAAGCGTAAGCCGGAGCGTTCTGATCTGTCTGCGGACATTAACGAACACCTGATCGTCGAGCTTTACTCCAAGTAA", - "dna_sequence_length": 621, - "functions": [ - "30S ribosomal subunit protein S4" - ], - "id": "CDS_3234", - 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"GI:16131177" - ], - [ - "gene_synonym", - "b3298" - ], - [ - "gene_synonym", - "rpsM" - ], - [ - "gene_synonym", - "GeneID:947791" - ], - [ - "gene_synonym", - "JW3260" - ], - [ - "gene_synonym", - "ECK3285" - ], - [ - "gene_synonym", - "ASAP:ABE-0010809" - ], - [ - "gene_synonym", - "EcoGene:EG10912" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7S9" - ] - ], - "dna_sequence": "GTGGCCCGTATAGCAGGCATTAACATTCCTGATCATAAGCATGCCGTAATCGCATTAACTTCGATTTATGGCGTCGGCAAGACCCGTTCTAAAGCCATCCTGGCTGCAGCGGGTATCGCTGAAGATGTTAAGATCAGTGAGCTGTCTGAAGGACAAATCGACACGCTGCGTGACGAAGTTGCCAAATTTGTCGTTGAAGGTGATCTGCGCCGTGAAATCAGCATGAGCATCAAGCGCCTGATGGATCTTGGTTGCTATCGCGGTTTGCGTCATCGTCGTGGTCTCCCGGTTCGCGGTCAGCGTACCAAGACCAACGCACGTACCCGTAAGGGTCCGCGCAAACCGATCAAGAAATAA", - "dna_sequence_length": 357, - "functions": [ - "30S ribosomal subunit protein S13" - ], - "id": "CDS_3236", - "location": [ - [ - "NC_000913", - 3442471, - "-", - 357 - ] - ], - "md5": "ce4e7f56375739e0ad6494db9e855211", - "parent_gene": "", - 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"location": [ - [ - "NC_000913", - 3442734, - "-", - 117 - ] - ], - "md5": "b3e734790f750ba1749d9d80b3d4c05c", - "parent_gene": "", - "protein_md5": "1d39cb39316a9c2998ec292730c96ef2", - "protein_translation": "MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG", - "protein_translation_length": 38, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10766" - ], - [ - "gene_synonym", - "NP_417759.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGA2" - ], - [ - "gene_synonym", - "b3300" - ], - [ - "gene_synonym", - "GI:16131179" - ], - [ - "gene_synonym", - "JW3262" - ], - [ - "gene_synonym", - "ECK3287" - ], - [ - "gene_synonym", - "secY" - ], - [ - "gene_synonym", - "GeneID:947799" - ], - [ - "gene_synonym", - "prlA" - ], - [ - "gene_synonym", - "ASAP:ABE-0010814" - ] - ], - "dna_sequence": "ATGGCTAAACAACCGGGATTAGATTTTCAAAGTGCCAAAGGTGGCTTAGGCGAGCTGAAACGCAGACTGCTGTTTGTTATCGGTGCGCTGATTGTGTTCCGTATTGGCTCTTTTATTCCGATCCCTGGTATTGATGCCGCTGTACTTGCCAAACTGCTTGAGCAACAGCGAGGCACCATCATTGAGATGTTTAACATGTTCTCTGGTGGTGCTCTCAGCCGTGCTTCTATCTTTGCTCTGGGGATCATGCCGTATATTTCGGCGTCGATCATTATCCAGCTGCTGACGGTGGTTCACCCAACGTTGGCAGAAATTAAGAAAGAAGGGGAGTCTGGTCGTCGTAAGATCAGCCAGTACACCCGCTACGGTACTCTGGTGCTGGCAATATTCCAGTCGATCGGTATTGCTACCGGTCTGCCGAATATGCCTGGTATGCAAGGCCTGGTGATTAACCCGGGCTTTGCATTCTACTTCACCGCTGTTGTAAGTCTGGTCACAGGAACCATGTTCCTGATGTGGTTGGGCGAACAGATTACTGAACGAGGTATCGGCAACGGTATTTCAATCATTATCTTCGCCGGTATTGTCGCGGGACTCCCGCCAGCCATTGCCCATACTATCGAGCAAGCGCGTCAAGGCGACCTGCACTTCCTCGTGTTGCTGTTGGTTGCAGTATTAGTATTTGCAGTGACGTTCTTTGTTGTATTTGTTGAGCGTGGTCAACGCCGCATTGTGGTAAACTACGCGAAACGTCAGCAAGGTCGTCGTGTCTATGCTGCACAGAGCACACATTTACCGCTGAAAGTGAATATGGCGGGGGTAATCCCGGCAATCTTCGCTTCCAGTATTATTCTGTTCCCGGCGACCATCGCGTCATGGTTCGGGGGCGGTACTGGTTGGAACTGGCTGACAACAATTTCGCTGTATTTGCAGCCTGGGCAACCGCTTTATGTGTTACTCTATGCGTCTGCAATCATCTTCTTCTGTTTCTTCTACACGGCGTTGGTTTTCAACCCGCGTGAAACAGCAGATAACCTGAAGAAGTCCGGTGCATTTGTACCAGGAATTCGTCCGGGAGAGCAAACGGCGAAGTATATCGATAAAGTAATGACCCGCCTGACCCTGGTTGGTGCGCTGTATATTACCTTTATCTGCCTGATCCCGGAGTTCATGCGTGATGCAATGAAAGTACCGTTCTACTTCGGTGGGACCTCACTGCTTATCGTTGTTGTCGTGATTATGGACTTTATGGCTCAAGTGCAAACTCTGATGATGTCCAGTCAGTATGAGTCTGCATTGAAGAAGGCGAACCTGAAAGGCTACGGCCGATAA", 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"GI:16131180" - ], - [ - "gene_synonym", - "EcoGene:EG10876" - ], - [ - "gene_synonym", - "rplO" - ], - [ - "gene_synonym", - "ASAP:ABE-0010819" - ], - [ - "gene_synonym", - "NP_417760.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02413" - ], - [ - "gene_synonym", - "ECK3288" - ] - ], - "dna_sequence": "ATGCGTTTAAATACTCTGTCTCCGGCCGAAGGCTCCAAAAAGGCGGGTAAACGCCTGGGTCGTGGTATCGGTTCTGGCCTCGGTAAAACCGGTGGTCGTGGTCACAAAGGTCAGAAGTCTCGTTCTGGCGGTGGCGTACGTCGCGGTTTCGAGGGTGGTCAGATGCCTCTGTACCGTCGTCTGCCGAAATTCGGCTTCACTTCTCGTAAAGCAGCGATTACAGCCGAAATTCGTCTGTCTGACCTGGCTAAAGTAGAAGGCGGTGTAGTAGACCTGAACACGCTGAAAGCGGCTAACATTATCGGTATCCAGATCGAGTTCGCGAAAGTGATCCTGGCTGGCGAAGTAACGACTCCGGTAACTGTTCGTGGCCTGCGTGTTACTAAAGGCGCTCGTGCTGCTATCGAAGCTGCTGGCGGTAAAATCGAGGAATAA", - "dna_sequence_length": 435, - "functions": [ - "50S ribosomal subunit protein L15" - ], - "id": "CDS_3239", - "location": [ - [ - "NC_000913", - 3444539, - "-", - 435 - ] - ], - "md5": "00bb6233a330a55387427543d3bdd1c9", - "parent_gene": "", - "protein_md5": "dbe6bebee8554c803fd1f9fd03723cdc", - "protein_translation": "MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEIRLSDLAKVEGGVVDLNTLKAANIIGIQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE", - "protein_translation_length": 144, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10888" - ], - [ - "gene_synonym", - "JW3264" - ], - [ - "gene_synonym", - "b3302" - ], - [ - "gene_synonym", - "GI:16131181" - ], - [ - "gene_synonym", - "NP_417761.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010821" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG51" - ], - [ - "gene_synonym", - "GeneID:947797" - ], - [ - "gene_synonym", - "rpmD" - ], - [ - "gene_synonym", - "ECK3289" - ] - ], - "dna_sequence": "ATGGCAAAGACTATTAAAATTACTCAAACCCGCAGTGCAATCGGTCGTCTGCCGAAACACAAGGCAACGCTGCTTGGCCTGGGTCTGCGTCGTATTGGTCACACCGTAGAGCGCGAGGATACTCCTGCTATTCGCGGTATGATCAACGCGGTTTCCTTCATGGTTAAAGTTGAGGAGTAA", - "dna_sequence_length": 180, - "functions": [ - "50S ribosomal subunit protein L30" - ], - "id": "CDS_3240", - "location": [ - [ - "NC_000913", - 3444722, - "-", - 180 - ] - ], - "md5": "1c9ccb162d82cc7821d505bb50b080e8", - "parent_gene": "", - "protein_md5": "f3f9af9f0f3baa9ec3319b1573a90dfc", - "protein_translation": "MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAIRGMINAVSFMVKVEE", - "protein_translation_length": 59, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rpsE" - ], - [ - "gene_synonym", - "NP_417762.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7W1" - ], - [ - "gene_synonym", - "b3303" - ], - [ - "gene_synonym", - "JW3265" - ], - [ - "gene_synonym", - "GI:16131182" - ], - [ - "gene_synonym", - "eps" - ], - [ - "gene_synonym", - "spcA" - ], - [ - "gene_synonym", - "GeneID:947795" - ], - [ - "gene_synonym", - "EcoGene:EG10904" - ], - [ - "gene_synonym", - "ECK3290" - ], - [ - "gene_synonym", - "ASAP:ABE-0010823" - ], - [ - "gene_synonym", - "spc" - ] - ], - "dna_sequence": "ATGGCTCACATCGAAAAACAAGCTGGCGAACTGCAGGAAAAGCTGATCGCGGTAAACCGCGTATCTAAAACCGTTAAAGGTGGTCGTATTTTCTCCTTCACAGCTCTGACTGTAGTTGGCGATGGTAACGGTCGCGTTGGTTTTGGTTACGGTAAAGCGCGTGAAGTTCCAGCAGCGATCCAGAAAGCGATGGAAAAAGCCCGTCGCAATATGATTAACGTCGCGCTGAATAACGGCACTCTGCAACACCCTGTTAAAGGTGTTCACACGGGTTCTCGCGTATTCATGCAGCCGGCTTCCGAAGGTACCGGTATCATCGCCGGTGGTGCAATGCGCGCCGTTCTGGAAGTCGCTGGGGTTCATAACGTTCTGGCTAAAGCCTATGGTTCCACCAACCCGATCAACGTGGTTCGTGCAACTATTGATGGCCTGGAAAATATGAATTCTCCAGAAATGGTCGCTGCCAAGCGTGGTAAATCCGTTGAAGAAATTCTGGGGAAATAA", - "dna_sequence_length": 504, - "functions": [ - "30S ribosomal subunit protein S5" - ], - "id": "CDS_3241", - "location": [ - [ - "NC_000913", - 3445229, - "-", - 504 - ] - ], - "md5": "1108c02ba1f562b362d1c47916347aa6", - "parent_gene": "", - "protein_md5": "5e26b9261841fedfc3f886e196ad600b", - "protein_translation": "MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEEILGK", 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"CDS_3242", - "location": [ - [ - "NC_000913", - 3445597, - "-", - 354 - ] - ], - "md5": "d7d1ebb69eebee8be64b59f59f002e97", - "parent_gene": "", - "protein_md5": "56aa23d4e137982cf428a6ee5372d2cc", - "protein_translation": "MDKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNGSEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGRVQALADAAREAGLQF", - "protein_translation_length": 117, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947803" - ], - [ - "gene_synonym", - "NP_417764.1" - ], - [ - "gene_synonym", - "JW3267" - ], - [ - "gene_synonym", - "GI:16131184" - ], - [ - "gene_synonym", - "b3305" - ], - [ - "gene_synonym", - "EcoGene:EG10869" - ], - [ - "gene_synonym", - "ASAP:ABE-0010827" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG55" - ], - [ - "gene_synonym", - "ECK3292" - ], - [ - "gene_synonym", - "rplF" - ] - ], - "dna_sequence": "ATGTCTCGTGTTGCTAAAGCACCGGTCGTTGTTCCTGCCGGCGTTGACGTAAAAATCAACGGTCAGGTTATTACGATCAAAGGTAAAAACGGCGAGCTGACTCGTACTCTCAACGATGCTGTTGAAGTTAAACATGCAGATAATACCCTGACCTTCGGTCCGCGTGATGGTTACGCAGACGGTTGGGCACAGGCTGGTACCGCGCGTGCCCTGCTGAACTCAATGGTTATCGGTGTTACCGAAGGCTTCACTAAGAAGCTGCAGCTGGTTGGTGTAGGTTACCGTGCAGCGGTTAAAGGCAATGTGATTAACCTGTCTCTGGGTTTCTCTCATCCTGTTGACCATCAGCTGCCTGCGGGTATCACTGCTGAATGTCCGACTCAGACTGAAATCGTGCTGAAAGGCGCTGATAAGCAGGTGATCGGCCAGGTTGCAGCGGATCTGCGCGCCTACCGTCGTCCTGAGCCTTATAAAGGCAAGGGTGTTCGTTACGCCGACGAAGTCGTGCGTACCAAAGAGGCTAAGAAGAAGTAA", - "dna_sequence_length": 534, - "functions": [ - "50S ribosomal subunit protein L6" - ], - "id": "CDS_3243", - "location": [ - [ - "NC_000913", - 3446140, - "-", - 534 - ] - ], - "md5": "c346388739fb20934a94c2202a9a3508", - "parent_gene": "", - "protein_md5": "fca3d6d18d398b02d8ecfea1adc85eee", - "protein_translation": "MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNVINLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGKGVRYADEVVRTKEAKKK", - "protein_translation_length": 177, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7W7" - ], - [ - "gene_synonym", - "JW3268" - ], - [ - "gene_synonym", - "GI:16131185" - ], - [ - "gene_synonym", - "EcoGene:EG10907" - ], - [ - "gene_synonym", - "b3306" - ], - [ - "gene_synonym", - "GeneID:947802" - ], - [ - "gene_synonym", - "NP_417765.1" - ], - [ - "gene_synonym", - "ECK3293" - ], - [ - "gene_synonym", - "rpsH" - ], - [ - "gene_synonym", - "ASAP:ABE-0010829" - ] - ], - "dna_sequence": "ATGAGCATGCAAGATCCGATCGCGGATATGCTGACCCGTATCCGTAACGGTCAGGCCGCGAACAAAGCTGCGGTCACCATGCCTTCCTCCAAGCTGAAAGTGGCAATCGCCAACGTGCTGAAGGAAGAAGGTTTTATTGAAGATTTTAAAGTTGAAGGCGACACCAAGCCTGAACTGGAACTTACTCTGAAGTATTTCCAGGGCAAAGCTGTTGTAGAAAGCATTCAGCGTGTCAGCCGCCCAGGTCTGCGCATCTATAAACGTAAAGATGAGCTGCCGAAAGTTATGGCGGGTCTGGGTATCGCAGTTGTTTCTACCTCTAAAGGTGTTATGACTGATCGTGCAGCGCGCCAGGCTGGTCTTGGTGGCGAAATTATCTGCTACGTAGCCTAA", - "dna_sequence_length": 393, - "functions": [ - "30S ribosomal subunit protein S8" - ], - "id": "CDS_3244", - "location": [ - [ - "NC_000913", - 3446545, - "-", - 393 - ] - ], - "md5": "c1aae242b2cde493649ffb4fbc82f729", - "parent_gene": "", - "protein_md5": "98f615537815942b22a86925403a8f47", - "protein_translation": "MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA", - "protein_translation_length": 130, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947801" - ], - [ - "gene_synonym", - "EcoGene:EG10913" - ], - [ - "gene_synonym", - "JW3269" - ], - [ - "gene_synonym", - "GI:16131186" - ], - [ - "gene_synonym", - "rpsN" - ], - [ - "gene_synonym", - "b3307" - ], - [ - "gene_synonym", - "ECK3294" - ], - [ - "gene_synonym", - "ASAP:ABE-0010831" - ], - [ - "gene_synonym", - "NP_417766.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG59" - ] - ], - "dna_sequence": "ATGGCTAAGCAATCAATGAAAGCACGCGAAGTAAAACGCGTAGCTTTAGCTGATAAATACTTCGCGAAACGCGCTGAACTGAAAGCGATCATCTCTGATGTGAACGCTTCCGACGAAGATCGTTGGAACGCTGTTCTCAAGCTGCAGACTCTGCCGCGTGATTCCAGCCCGTCTCGTCAGCGTAACCGCTGCCGTCAAACAGGTCGTCCGCATGGTTTCCTGCGGAAGTTCGGGTTGAGCCGTATTAAGGTCCGTGAAGCCGCTATGCGCGGTGAAATCCCGGGTCTGAAAAAGGCTAGCTGGTAA", - "dna_sequence_length": 306, - "functions": [ - "30S ribosomal subunit protein S14" - ], - "id": "CDS_3245", - "location": [ - [ - "NC_000913", - 3446884, - "-", - 306 - ] - ], - "md5": "c6968d3cdecb6fa7ddfc86ef7372c7c9", - "parent_gene": "", - "protein_md5": "7db5f0a9ed08d687fd023064e70bb876", - 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"ATGGCGAAACTGCATGATTACTACAAAGACGAAGTAGTTAAAAAACTCATGACTGAGTTTAACTACAATTCTGTCATGCAAGTCCCTCGGGTCGAGAAGATCACCCTGAACATGGGTGTTGGTGAAGCGATCGCTGACAAAAAACTGCTGGATAACGCAGCAGCAGACCTGGCAGCAATCTCCGGTCAAAAACCGCTGATCACCAAAGCACGCAAATCTGTTGCAGGCTTCAAAATCCGTCAGGGCTATCCGATCGGCTGTAAAGTAACTCTGCGTGGCGAACGCATGTGGGAGTTCTTTGAGCGCCTGATCACTATTGCTGTACCTCGTATCCGTGACTTCCGTGGCCTGTCCGCTAAGTCTTTCGACGGTCGTGGTAACTACAGCATGGGTGTCCGTGAGCAGATCATCTTCCCAGAAATCGACTACGATAAAGTCGACCGCGTTCGTGGTTTGGATATTACCATTACCACTACTGCGAAATCTGACGAAGAAGGCCGCGCTCTGCTGGCTGCCTTTGACTTCCCGTTCCGCAAGTAA", - "dna_sequence_length": 540, - "functions": [ - "50S ribosomal subunit protein L5" - ], - "id": "CDS_3246", - "location": [ - [ - "NC_000913", - 3447438, - "-", - 540 - ] - ], - "md5": "724484d563441e7b8b6ed725a2ee8549", - "parent_gene": "", - "protein_md5": "1a6377b3ef5b5fc6796affa39279224a", - "protein_translation": "MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFRK", - "protein_translation_length": 179, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3309" - ], - [ - "gene_synonym", - "GeneID:947810" - ], - [ - "gene_synonym", - "rplX" - ], - [ - "gene_synonym", - "GI:16131188" - ], - [ - "gene_synonym", - "JW3271" - ], - [ - "gene_synonym", - "NP_417768.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010835" - ], - [ - "gene_synonym", - "ECK3296" - ], - [ - "gene_synonym", - "EcoGene:EG10884" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60624" - ] - ], - "dna_sequence": "ATGGCAGCGAAAATCCGTCGTGATGACGAAGTTATCGTGTTAACCGGTAAAGATAAAGGTAAACGCGGTAAAGTTAAGAATGTCCTGTCTTCCGGCAAGGTCATTGTTGAAGGTATCAACCTGGTTAAGAAACATCAGAAGCCGGTTCCGGCCCTGAACCAACCGGGTGGCATCGTTGAAAAAGAAGCCGCTATTCAGGTTTCCAACGTAGCAATCTTCAATGCGGCAACCGGCAAGGCTGACCGTGTAGGCTTTAGATTCGAAGACGGTAAAAAAGTCCGTTTCTTCAAGTCTAACAGCGAAACTATCAAGTAA", - "dna_sequence_length": 315, - "functions": [ - "50S ribosomal subunit protein L24" - ], - "id": "CDS_3247", - "location": [ - [ - "NC_000913", - 3447767, - "-", - 315 - ] - ], - "md5": "d716bcb77e0fa34484c4dd121a2af762", - "parent_gene": "", - "protein_md5": "17619cacd8795734f1e7bcc936a920d2", - "protein_translation": "MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKKHQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSETIK", - "protein_translation_length": 104, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10875" - ], - [ - "gene_synonym", - "GI:16131189" - ], - [ - "gene_synonym", - "GeneID:947809" - ], - [ - "gene_synonym", - "NP_417769.1" - 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"MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEVL", - "protein_translation_length": 123, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10916" - ], - [ - "gene_synonym", - "neaA" - ], - [ - "gene_synonym", - "NP_417770.1" - ], - [ - "gene_synonym", - "GI:16131190" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG63" - ], - [ - "gene_synonym", - "b3311" - ], - [ - "gene_synonym", - "JW3273" - ], - [ - "gene_synonym", - "ASAP:ABE-0010840" - ], - [ - "gene_synonym", - "rpsQ" - ], - [ - "gene_synonym", - "GeneID:947808" - ], - [ - "gene_synonym", - "ECK3298" - ] - ], - "dna_sequence": "ATGACCGATAAAATCCGTACTCTGCAAGGTCGCGTTGTTAGCGACAAAATGGAGAAATCCATTGTTGTTGCTATCGAACGTTTTGTGAAACACCCGATCTACGGTAAATTCATCAAGCGTACGACCAAACTGCACGTACATGACGAGAACAACGAATGCGGTATCGGTGACGTGGTTGAAATCCGCGAATGCCGTCCGCTGTCCAAGACTAAATCCTGGACGCTGGTTCGCGTTGTAGAGAAAGCGGTTCTGTAA", - "dna_sequence_length": 255, - "functions": [ - "30S ribosomal subunit protein S17" - ], - "id": "CDS_3249", - "location": [ - [ - "NC_000913", - 3448568, - "-", - 255 - ] - ], - "md5": "c10b20d7fc727993b5c0ba649a0c98a5", - "parent_gene": "", - "protein_md5": "269efc68924760e54d96bb26e1d8210a", - "protein_translation": "MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL", - "protein_translation_length": 84, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947807" - ], - [ - "gene_synonym", - "NP_417771.1" - ], - [ - "gene_synonym", - "b3312" - ], - [ - "gene_synonym", - "JW3274" - ], - [ - "gene_synonym", - "EcoGene:EG10887" - ], - [ - "gene_synonym", - "GI:16131191" - ], - [ - "gene_synonym", - "ASAP:ABE-0010842" - ], - [ - "gene_synonym", - "rpmC" - ], - [ - "gene_synonym", - "ECK3299" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7M6" - ] - ], - "dna_sequence": "ATGAAAGCAAAAGAGCTGCGTGAGAAGAGCGTTGAAGAGCTGAACACCGAGCTGCTGAACCTGCTGCGTGAGCAGTTCAACCTGCGTATGCAGGCTGCAAGTGGCCAGCTGCAACAGTCTCACCTGTTGAAGCAAGTGCGTCGCGATGTCGCACGCGTTAAGACTTTACTGAACGAGAAGGCGGGTGCGTAA", - "dna_sequence_length": 192, - "functions": [ - "50S ribosomal subunit protein L29" - ], - "id": "CDS_3250", - "location": [ - [ - "NC_000913", - 3448759, - "-", - 192 - ] - ], - "md5": "2408f6d046d8b0b3efd41773856ce91b", - "parent_gene": "", - "protein_md5": "a7d6f728c27ff151616ca9b508e75108", - "protein_translation": "MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEKAGA", - "protein_translation_length": 63, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADY7" - ], - [ - "gene_synonym", - "GeneID:947806" - ], - [ - "gene_synonym", - "JW3275" - ], - [ - "gene_synonym", - "b3313" - ], - [ - "gene_synonym", - "GI:16131192" - ], - [ - "gene_synonym", - "rplP" - ], - [ - "gene_synonym", - "NP_417772.1" - ], - [ - "gene_synonym", - "EcoGene:EG10877" - ], - [ - "gene_synonym", - "ECK3300" - ], - [ - "gene_synonym", - "ASAP:ABE-0010846" - ] - ], - "dna_sequence": "ATGTTACAACCAAAGCGTACAAAATTCCGTAAAATGCACAAAGGCCGTAACCGCGGTCTGGCGCAGGGTACGGATGTTAGCTTCGGCAGCTTCGGTCTGAAAGCTGTTGGCCGTGGTCGTCTGACTGCCCGTCAGATCGAAGCAGCACGTCGTGCTATGACCCGTGCAGTTAAGCGTCAAGGTAAGATCTGGATCCGTGTGTTCCCGGACAAACCGATCACTGAAAAGCCGCTGGCAGTGCGTATGGGTAAAGGTAAAGGTAACGTGGAGTATTGGGTTGCCTTGATTCAGCCGGGTAAAGTCCTGTATGAAATGGACGGTGTTCCGGAAGAGCTGGCCCGTGAAGCATTCAAGCTGGCAGCAGCGAAACTGCCGATTAAAACCACCTTTGTAACTAAGACGGTGATGTAA", - "dna_sequence_length": 411, - "functions": [ - "50S ribosomal subunit protein L16" - ], - "id": "CDS_3251", - "location": [ - [ - "NC_000913", - 3449169, - "-", - 411 - ] - ], - "md5": "609f566d9580bd0618e508cfd930f0ca", - "parent_gene": "", - "protein_md5": "159e6ede332e7763b3b56f0b925339f5", - "protein_translation": "MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM", - "protein_translation_length": 136, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10902" - ], - [ - "gene_synonym", - "rpsC" - ], - [ - "gene_synonym", - "GeneID:947814" - ], - [ - "gene_synonym", - "GI:16131193" - ], - [ - "gene_synonym", - "JW3276" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7V3" - ], - [ - "gene_synonym", - "b3314" - ], - [ - "gene_synonym", - "NP_417773.1" - ], - [ - "gene_synonym", - "ECK3301" - ], - [ - "gene_synonym", - "ASAP:ABE-0010848" - ] - ], - "dna_sequence": "ATGGGTCAGAAAGTACATCCTAATGGTATTCGCCTGGGTATTGTAAAACCATGGAACTCTACCTGGTTTGCGAACACCAAAGAATTCGCTGACAACCTGGACAGCGATTTTAAAGTACGTCAGTACCTGACTAAGGAACTGGCTAAAGCGTCCGTATCTCGTATCGTTATCGAGCGTCCGGCTAAGAGCATCCGTGTAACCATTCACACTGCTCGCCCGGGTATCGTTATCGGTAAAAAAGGTGAAGACGTAGAAAAACTGCGTAAGGTCGTAGCGGACATCGCTGGCGTTCCTGCACAGATCAACATCGCCGAAGTTCGTAAGCCTGAACTGGACGCAAAACTGGTTGCTGACAGCATCACTTCTCAGCTGGAACGTCGCGTTATGTTCCGTCGTGCTATGAAGCGTGCTGTACAGAACGCAATGCGTCTGGGCGCTAAAGGTATTAAAGTTGAAGTTAGCGGCCGTCTGGGCGGCGCGGAAATCGCACGTACCGAATGGTACCGCGAAGGTCGCGTACCGCTGCACACTCTGCGTGCTGACATCGACTACAACACCTCTGAAGCGCACACCACTTACGGTGTAATCGGCGTTAAAGTGTGGATCTTCAAAGGCGAGATCCTGGGTGGTATGGCTGCTGTTGAACAACCGGAAAAACCGGCTGCTCAGCCTAAAAAGCAGCAGCGTAAAGGCCGTAAATAA", - "dna_sequence_length": 702, - "functions": [ - "30S ribosomal subunit protein S3" - ], - "id": "CDS_3252", - "location": [ - [ - "NC_000913", - 3449883, - "-", - 702 - ] - ], - "md5": "49b7d928e57e8a9ff17e085eda72bfe6", - "parent_gene": "", - "protein_md5": "015d00c9b7f7f2897a9ebd700c9a9d69", - "protein_translation": "MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK", - "protein_translation_length": 233, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947813" - ], - [ - "gene_synonym", - "NP_417774.1" - ], - [ - "gene_synonym", - "rplV" - ], - [ - "gene_synonym", - "JW3277" - ], - [ - "gene_synonym", - "eryB" - ], - [ - "gene_synonym", - "GI:16131194" - ], - [ - "gene_synonym", - "ASAP:ABE-0010850" - ], - [ - "gene_synonym", - "b3315" - ], - [ - "gene_synonym", - "ECK3302" - ], - [ - "gene_synonym", - "EcoGene:EG10882" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P61175" - ] - ], - "dna_sequence": "ATGGAAACTATCGCTAAACATCGCCATGCTCGTTCTTCTGCTCAGAAGGTTCGCCTTGTTGCTGACCTGATTCGCGGTAAGAAAGTGTCGCAGGCTCTGGATATTTTGACCTACACCAACAAGAAAGCGGCTGTACTGGTCAAGAAAGTTCTGGAATCTGCCATTGCTAACGCTGAACACAACGATGGCGCTGACATTGACGATCTGAAAGTTACGAAAATTTTCGTAGACGAAGGCCCGAGCATGAAGCGCATTATGCCGCGTGCAAAAGGTCGTGCAGATCGCATCCTGAAGCGCACCAGCCACATCACTGTGGTTGTGTCCGATCGCTGA", - "dna_sequence_length": 333, - "functions": [ - "50S ribosomal subunit protein L22" - ], - "id": "CDS_3253", - "location": [ - [ - "NC_000913", - 3450233, - "-", - 333 - ] - ], - "md5": "88b5f3dac5278253a6d88026245262d3", - "parent_gene": "", - "protein_md5": "d44845a02f8ee59d1e9b327b0534f8f6", - "protein_translation": "METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSDR", - "protein_translation_length": 110, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947811" - ], - [ - "gene_synonym", - "JW3278" - ], - [ - "gene_synonym", - "b3316" - ], - [ - "gene_synonym", - "GI:16131195" - ], - [ - "gene_synonym", - "EcoGene:EG10918" - ], - [ - "gene_synonym", - "rpsS" - ], - [ - "gene_synonym", - "ECK3303" - ], - [ - "gene_synonym", - "NP_417775.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010852" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7U3" - ] - ], - "dna_sequence": "ATGCCACGTTCTCTCAAGAAAGGTCCTTTTATTGACCTGCACTTGCTGAAGAAGGTAGAGAAAGCGGTGGAAAGCGGAGACAAGAAGCCCCTGCGCACTTGGTCCCGTCGTTCAACGATCTTTCCTAACATGATCGGTTTGACCATCGCTGTCCATAATGGTCGTCAGCACGTTCCGGTATTTGTAACCGACGAAATGGTTGGTCACAAACTGGGTGAATTCGCACCGACTCGTACTTATCGCGGCCACGCTGCTGATAAAAAAGCGAAGAAGAAATAA", - "dna_sequence_length": 279, - "functions": [ - "30S ribosomal subunit protein S19" - ], - "id": "CDS_3254", - "location": [ - [ - "NC_000913", - 3450526, - "-", - 279 - ] - ], - "md5": "983b20ae350f5ef5a1a948833eb99b3e", - "parent_gene": "", - "protein_md5": "75dc389130382ce3a8c6078ff4f868d1", - "protein_translation": "MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK", - "protein_translation_length": 92, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60422" - ], - [ - "gene_synonym", - "JW3279" - ], - [ - "gene_synonym", - "ASAP:ABE-0010854" - ], - [ - "gene_synonym", - "b3317" - ], - [ - "gene_synonym", - "GI:16131196" - ], - [ - "gene_synonym", - "ECK3304" - ], - [ - "gene_synonym", - "EcoGene:EG10865" - ], - [ - "gene_synonym", - "NP_417776.1" - ], - [ - "gene_synonym", - "rplB" - ], - [ - "gene_synonym", - "GeneID:947820" - ] - ], - "dna_sequence": "ATGGCAGTTGTTAAATGTAAACCGACATCTCCGGGTCGTCGCCACGTAGTTAAAGTGGTTAACCCTGAGCTGCACAAGGGCAAACCTTTTGCTCCGTTGCTGGAAAAAAACAGCAAATCCGGTGGTCGTAACAACAATGGCCGTATCACCACTCGTCATATCGGTGGTGGCCACAAGCAGGCTTACCGTATTGTTGACTTCAAACGCAACAAAGACGGTATCCCGGCAGTTGTTGAACGTCTTGAGTACGATCCGAACCGTTCCGCGAACATCGCGCTGGTTCTGTACAAAGACGGTGAACGCCGTTACATCCTGGCCCCTAAAGGCCTGAAAGCTGGCGACCAGATTCAGTCTGGCGTTGATGCTGCAATCAAACCAGGTAACACCCTGCCGATGCGCAACATCCCGGTTGGTTCTACTGTTCATAACGTAGAAATGAAACCAGGTAAAGGCGGTCAGCTGGCACGTTCCGCTGGTACTTACGTTCAGATCGTTGCTCGTGATGGTGCTTATGTCACCCTGCGTCTGCGTTCTGGTGAAATGCGTAAAGTAGAAGCAGACTGCCGTGCAACTCTGGGCGAAGTTGGCAATGCTGAGCATATGCTGCGCGTTCTGGGTAAAGCAGGTGCTGCACGCTGGCGTGGTGTTCGTCCGACCGTTCGCGGTACCGCGATGAACCCGGTAGACCACCCACATGGTGGTGGTGAAGGTCGTAACTTTGGTAAGCACCCGGTAACTCCGTGGGGCGTTCAGACCAAAGGTAAGAAGACCCGCAGCAACAAGCGTACTGATAAATTCATCGTACGTCGCCGTAGCAAATAA", - "dna_sequence_length": 822, - "functions": [ - "50S ribosomal subunit protein L2" - ], - "id": "CDS_3255", - "location": [ - [ - "NC_000913", - 3451364, - "-", - 822 - ] - ], - "md5": "3ab1d3f4770a511c0c8d648d007fd115", - "parent_gene": "", - "protein_md5": "b8dda3d5223018c567ea5f3ca22e9fbc", - "protein_translation": "MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK", - "protein_translation_length": 273, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3318" - ], - [ - "gene_synonym", - "GeneID:947819" - ], - [ - "gene_synonym", - "JW3280" - ], - [ - "gene_synonym", - "NP_417777.1" - ], - [ - "gene_synonym", - "rplW" - ], - [ - "gene_synonym", - "EcoGene:EG10883" - ], - [ - "gene_synonym", - "GI:16131197" - ], - [ - "gene_synonym", - "ASAP:ABE-0010856" - ], - [ - "gene_synonym", - "ECK3305" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADZ0" - ] - ], - "dna_sequence": "ATGATTCGTGAAGAACGTCTGCTGAAGGTGCTGCGTGCACCGCACGTTTCTGAAAAAGCGTCTACTGCGATGGAAAAATCCAACACCATCGTACTCAAAGTTGCTAAAGACGCGACCAAAGCAGAAATCAAAGCTGCTGTGCAGAAACTGTTTGAAGTCGAAGTCGAAGTCGTTAACACCCTGGTAGTTAAAGGGAAAGTTAAACGTCACGGACAGCGTATCGGTCGTCGTAGCGACTGGAAAAAAGCTTACGTCACCCTGAAAGAAGGCCAGAATCTGGACTTCGTTGGCGGCGCTGAGTAA", - "dna_sequence_length": 303, - "functions": [ - "50S ribosomal subunit protein L23" - ], - "id": "CDS_3256", - "location": [ - [ - "NC_000913", - 3451684, - "-", - 303 - ] - ], - "md5": "dc629749dce53edc9302a34708a8e2d1", - "parent_gene": "", - "protein_md5": "a9eb05a116a704d31881e542cf92b1be", - "protein_translation": "MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE", - "protein_translation_length": 100, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131198" - ], - [ - "gene_synonym", - "b3319" - ], - [ - "gene_synonym", - "JW3281" - ], - [ - "gene_synonym", - "ASAP:ABE-0010858" - ], - [ - "gene_synonym", - "EcoGene:EG10867" - ], - [ - "gene_synonym", - "GeneID:947818" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60723" - ], - [ - "gene_synonym", - "eryA" - ], - [ - "gene_synonym", - "ECK3306" - ], - [ - "gene_synonym", - "rplD" - ], - [ - "gene_synonym", - "NP_417778.1" - ] - ], - "dna_sequence": "ATGGAATTAGTATTGAAAGACGCGCAGAGCGCGCTGACTGTTTCCGAAACTACCTTCGGTCGTGATTTCAACGAAGCGCTGGTTCACCAGGTTGTTGTTGCTTATGCAGCTGGTGCTCGTCAGGGTACTCGTGCTCAGAAGACTCGTGCTGAAGTAACTGGTTCCGGTAAAAAACCGTGGCGCCAGAAAGGCACCGGCCGTGCGCGTTCTGGTTCTATCAAGAGCCCGATCTGGCGTTCTGGTGGCGTGACCTTTGCTGCTCGTCCGCAGGACCACAGTCAAAAAGTTAACAAGAAGATGTACCGCGGCGCGCTGAAAAGCATCCTGTCCGAACTGGTACGTCAGGATCGTCTGATCGTTGTCGAGAAGTTCTCTGTAGAAGCGCCGAAAACTAAGCTGCTGGCACAGAAACTGAAAGACATGGCTCTGGAAGATGTGCTGATCATCACCGGTGAGCTGGACGAAAACCTGTTCCTGGCTGCGCGCAACCTGCACAAGGTTGACGTACGCGATGCAACTGGTATCGACCCGGTTAGCCTGATCGCCTTCGACAAAGTCGTAATGACTGCTGATGCTGTTAAGCAAGTTGAGGAGATGCTGGCATGA", - "dna_sequence_length": 606, - "functions": [ - "50S ribosomal subunit protein L4" - ], - "id": "CDS_3257", - "location": [ - [ - "NC_000913", - 3452286, - "-", - 606 - ] - ], - "md5": "3415db91209c9cee9e3ea62e4771f244", - "parent_gene": "", - "protein_md5": "af999efcbd0a2375432bf21906bd585c", - "protein_translation": "MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYRGALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLAARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA", - "protein_translation_length": 201, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131199" - ], - [ - "gene_synonym", - "EcoGene:EG10866" - ], - [ - "gene_synonym", - "GeneID:947817" - ], - [ - "gene_synonym", - "JW3282" - ], - [ - "gene_synonym", - "ASAP:ABE-0010860" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60438" - ], - [ - "gene_synonym", - "ECK3307" - ], - [ - "gene_synonym", - "b3320" - ], - [ - "gene_synonym", - "rplC" - ], - [ - "gene_synonym", - "NP_417779.1" - ] - ], - "dna_sequence": "ATGATTGGTTTAGTCGGTAAAAAAGTGGGTATGACCCGTATCTTCACAGAAGACGGCGTTTCTATCCCAGTAACCGTAATCGAAGTTGAAGCAAACCGCGTTACTCAGGTTAAAGACCTGGCTAACGATGGCTACCGTGCTATTCAGGTGACCACCGGTGCTAAAAAAGCTAACCGTGTGACCAAGCCTGAAGCTGGCCACTTCGCTAAAGCTGGCGTAGAAGCTGGCCGTGGTCTGTGGGAATTCCGCCTGGCTGAAGGCGAAGAGTTCACTGTAGGTCAGAGCATTAGCGTTGAACTGTTTGCTGACGTTAAAAAAGTTGACGTAACTGGCACCTCTAAAGGTAAAGGTTTCGCAGGTACCGTTAAGCGCTGGAACTTCCGTACCCAGGACGCTACTCACGGTAACTCCTTGTCTCACCGCGTTCCGGGTTCTATCGGTCAGAACCAGACTCCGGGCAAAGTGTTCAAAGGCAAGAAAATGGCAGGTCAGATGGGTAACGAACGTGTAACCGTTCAGAGCCTTGACGTAGTACGCGTTGACGCTGAGCGCAACCTGCTGCTGGTTAAAGGTGCTGTCCCGGGTGCAACCGGTAGCGACCTGATCGTTAAACCAGCTGTGAAGGCGTAA", - "dna_sequence_length": 630, - "functions": [ - "50S ribosomal subunit protein L3" - ], - "id": "CDS_3258", - "location": [ - [ - "NC_000913", - 3452926, - "-", - 630 - ] - ], - "md5": "659c411d3df825e0bbbdd2bc2216ba7b", - "parent_gene": "", - "protein_md5": "4c31ca787dff2e8979a12d5731b91705", - "protein_translation": "MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA", - "protein_translation_length": 209, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10909" - ], - [ - "gene_synonym", - "GeneID:947816" - ], - [ - "gene_synonym", - "b3321" - ], - [ - "gene_synonym", - "JW3283" - ], - [ - "gene_synonym", - "ASAP:ABE-0010862" - ], - [ - "gene_synonym", - "nusE" - ], - [ - "gene_synonym", - "rpsJ" - ], - [ - "gene_synonym", - "GI:16131200" - ], - [ - "gene_synonym", - "NP_417780.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7R5" - ], - [ - "gene_synonym", - "ECK3308" - ] - ], - "dna_sequence": "ATGCAGAACCAAAGAATCCGTATCCGCCTGAAAGCGTTTGATCATCGTCTGATCGATCAAGCAACCGCGGAAATCGTCGAGACTGCCAAGCGCACTGGTGCGCAGGTCCGTGGTCCGATCCCGCTGCCGACACGCAAAGAGCGCTTCACTGTTCTGATCTCCCCGCACGTCAACAAAGACGCGCGCGATCAGTACGAAATCCGTACTCACTTGCGTCTGGTTGACATCGTTGAGCCAACCGAGAAAACCGTTGATGCTCTGATGCGTCTGGATCTGGCTGCCGGTGTAGACGTGCAGATCAGCCTGGGTTAA", - "dna_sequence_length": 312, - "functions": [ - "30S ribosomal subunit protein S10" - ], - "id": "CDS_3259", - "location": [ - [ - "NC_000913", - 3453270, - "-", - 312 - ] - ], - "md5": "9c0e9f924b5b95e95d43f2eddb4bb67b", - "parent_gene": "", - "protein_md5": "9d6129626f9f807a8ce60eb3fa40b527", - "protein_translation": "MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG", - "protein_translation_length": 103, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "gspB" - ], - [ - "gene_synonym", - "JW3284" - ], - [ - "gene_synonym", - "pinO" - ], - [ - "gene_synonym", - "pioO" - ], - [ - "gene_synonym", - "GI:16131201" - ], - [ - "gene_synonym", - "ASAP:ABE-0010865" - ], - [ - "gene_synonym", - "NP_417781.1" - ], - [ - "gene_synonym", - "b3322" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03825" - ], - [ - "gene_synonym", - "EcoGene:EG11263" - ], - [ - "gene_synonym", - "GeneID:947826" - ], - [ - "gene_synonym", - "ECK3309" - ] - ], - "dna_sequence": "ATGTTTGAATTCTATATCGCCGCGCGTGAGCAGAAAGAAACAGGTCACCCTGGTATCTTCTCCCGACAAAAACACAGCACCATAATATATGTAATTTGTTTATTACTGATTTGCCTGTGGTTTGCAGGAATGGTGCTGGTTGGTGGGTATGCCAGGCAGCTATGGGTGCTTTGGATAGTAAAAGCCGAAGTCACTGTAGAGGCTGAAACGCCCGCTTTTAAACAATCAACACAACACTATTTCTTCAAAAAACAGCCACTCCCCGTCGTCGAATCCGTCGAGGAGGAAGATGACCCAGGCGTCGCGGTTGAGAATGCCCCCTCTTCTTCTGAAGACGAAGAAAATACTGTGGAAGAAAGCGAAGAGAAAGCCGGTTTAAGAGAGCGTGTCAAAAATGCACTGAACGAACTTGAGAGATAA", - "dna_sequence_length": 420, - "functions": [ - "part of gsp divergon involved in type II protein secretion" - ], - "id": "CDS_3260", - "location": [ - [ - "NC_000913", - 3453927, - "-", - 420 - ] - ], - "md5": "2427fa926b1ea8d625f1f3117e0d9721", - "parent_gene": "", - "protein_md5": "b6987b79a52b79d39ea0a6d578485e58", - "protein_translation": "MFEFYIAAREQKETGHPGIFSRQKHSTIIYVICLLLICLWFAGMVLVGGYARQLWVLWIVKAEVTVEAETPAFKQSTQHYFFKKQPLPVVESVEEEDDPGVAVENAPSSSEDEENTVEESEEKAGLRERVKNALNELER", - "protein_translation_length": 139, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45756" - ], - [ - "gene_synonym", - "JW3285" - ], - [ - "gene_synonym", - "gspA" - ], - [ - "gene_synonym", - "yheD" - ], - [ - "gene_synonym", - "ECK3310" - ], - [ - "gene_synonym", - "EcoGene:EG12888" - ], - [ - "gene_synonym", - "ASAP:ABE-0010867" - ], - [ - "gene_synonym", - "GI:16131202" - ], - [ - "gene_synonym", - "b3323" - ], - [ - "gene_synonym", - "NP_417782.1" - ], - [ - "gene_synonym", - "GeneID:947825" - ] - ], - "dna_sequence": "ATGTCTACGAGAAGAGAAGTTATTCTTTCCTGGTTGTGTGAGAAACGTCAAACCTGGCGTCTATGCTATTTGTTGGGTGAGGCTGGAAGTGGAAAAACCTGGCTGGCGCAGCAACTGCAAAAAGATAAACATCGCCGTGTGATTACTTTAAGCCTCGTTGTTTCCTGGCAAGGTAAGGCCGCATGGATCGTTACCGACGATAACGCGGCTGAACAGGGCTGCCGTGACAGCGCCTGGACGCGAGATGAGATGGCGGGGCAATTACTGCATGCGCTTCATCGAACTGATAGTCGCTGCCCTCTTATTATTATTGAAAATGCTCACCTGAATCACCGCCGCATACTTGATGATCTCCAACGCGCAATATCTCTTATTCCTGACGGTCAATTTTTGCTGATCGGCAGACCCGATCGAAAAGTCGAACGTGATTTTAAAAAACAGGGCATTGAACTTGTCTCGATAGGACGTCTGACGGAGCACGAACTTAAGGCAAGCATCCTTGAAGGTCAGAATATTGACCAACCCGATCTCCTTTTAACCGCCAGAGTTCTGAAACGGATAGCTTTATTATGTCGGGGCGATCGCAGAAAGCTGGCGCTTGCCGGCGAAACAATTCGCTTATTACAGCAAGCCGAGCAGACCAGCGTTTTCACAGCAAAACAATGGCGAATGATTTACCGCATATTGGGTGATAACCGCCCCCGGAAAATGCAGCTTGCCGTGGTGATGAGTGGAACCATTATCGCTCTTACCTGTGGTTGGCTACTGCTGTCCTCTTTTACAGCTACGTTACCCGTTCCTGCGTGGCTGATACCCGTAACGCCAGTAGTTAAACAAGATATGACTAAGGATATTGCTCATGTGGTGATGCGCGATAGTGAGGCGCTAAGCGTGTTATACGGCGTATGGGGGTACGAGGTCCCAGCTGATTCGGCCTGGTGCGATCAGGCAGTAAGAGCGGGGCTGGCATGTAAAAGTGGGAATGCTTCTTTACAAACATTGGTAGATCAGAATTTGCCCTGGATCGCATCGCTTAAAGTCGGGGACAAAAAATTGCCTGTTGTGGTCGTTCGCGTCGGTGAGGCTAGCGTTGATGTCCTCGTAGGTCAGCAAACGTGGACGCTGACACATAAATGGTTTGAGTCGGTATGGACGGGTGATTATCTTCTGTTGTGGAAAATGTCGCCGGAAGGGGAGAGTACCATTACGCGTGATAGCAGCGAGGAAGAGATTCTCTGGCTGGAAACGATGTTAAACCGCGCATTGCATATTTCGACAGAACCTTCGGCGGAGTGGCGTCCCTTGTTGGTAGAAAAAATAAAGCAATTTCAAAAAAGCCACCACTTGAAAACTGACGGTGTTGTTGGCTTTTCAACGTTAGTACATCTCTGGCAGGTGGCAGGGGAGAGTGCCTACTTATATCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGA", - "dna_sequence_length": 1470, - "functions": [ - "general secretory pathway component, cryptic" - ], - "id": "CDS_3261", - "location": [ - [ - "NC_000913", - 3455398, - "-", - 1470 - ] - ], - "md5": "b9e00e308a75a729c7caf4298a227f52", - "parent_gene": "", - "protein_md5": "4debf81d3296fd0f9a89452fce84c603", - "protein_translation": "MSTRREVILSWLCEKRQTWRLCYLLGEAGSGKTWLAQQLQKDKHRRVITLSLVVSWQGKAAWIVTDDNAAEQGCRDSAWTRDEMAGQLLHALHRTDSRCPLIIIENAHLNHRRILDDLQRAISLIPDGQFLLIGRPDRKVERDFKKQGIELVSIGRLTEHELKASILEGQNIDQPDLLLTARVLKRIALLCRGDRRKLALAGETIRLLQQAEQTSVFTAKQWRMIYRILGDNRPRKMQLAVVMSGTIIALTCGWLLLSSFTATLPVPAWLIPVTPVVKQDMTKDIAHVVMRDSEALSVLYGVWGYEVPADSAWCDQAVRAGLACKSGNASLQTLVDQNLPWIASLKVGDKKLPVVVVRVGEASVDVLVGQQTWTLTHKWFESVWTGDYLLLWKMSPEGESTITRDSSEEEILWLETMLNRALHISTEPSAEWRPLLVEKIKQFQKSHHLKTDGVVGFSTLVHLWQVAGESAYLYRDEANISPETTVKGK", - "protein_translation_length": 489, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "gspC" - ], - [ - "gene_synonym", - "JW3286" - ], - [ - "gene_synonym", - "yheE" - ], - [ - "gene_synonym", - "NP_417783.1" - ], - [ - "gene_synonym", - "ECK3311" - ], - [ - "gene_synonym", - "EcoGene:EG12889" - ], - [ - "gene_synonym", - "GI:16131203" - ], - [ - "gene_synonym", - "ASAP:ABE-0010877" - ], - [ - "gene_synonym", - "b3324" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45757" - ], - [ - "gene_synonym", - "GeneID:947824" - ] - ], - "dna_sequence": "GTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATCAACCAACAAACGCATTTCAGTCTGATTTCAGCCTTGCCGCTTTATGGCGTAACGAAAATCATGCTGGGGTAAAAGATGCAAATCCCGTGGCAGTTAATCAGGAAACACCTAAGCTCTCTATAGCGCTTAATGGCATTGTACTCACATCGAATGATGAGACTTCTTTTGTCTTAATTAATGAGGGGAGCGAACAAAAGCGATACTCCCTCAACGAAGCCCTTGAGTCAGCGCCGGGAACGTTTATTAGAAAAATAAATAAAACCAGCGTTGTGTTTGAAACTCACGGGCATTACGAAAAAGTAACTCTCCATCCAGGGCTACCTGACATCATCAAGCAGCCTGATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTACAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCGCTTGATAAATGTTTCCGTCGGGGAACTTACAGGAATGAATGGACTGCGTCATGAAAGGACTCAATAA", - "dna_sequence_length": 816, - "functions": [ - "general secretory pathway component, cryptic" - ], - "id": "CDS_3262", - "location": [ - [ - "NC_000913", - 3455578, - "+", - 816 - ] - ], - "md5": "cee22b4ab9bf5625d7bdacf91710938d", - "parent_gene": "", - "protein_md5": "42162f0c84c57dcfcf08fa7fe1e0dfd8", - "protein_translation": "MPTLRFPFHLANHNKDAAINILIIFISIGSIIFNVNYFHTTIVKNGQIINQPTNAFQSDFSLAALWRNENHAGVKDANPVAVNQETPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSLNEALESAPGTFIRKINKTSVVFETHGHYEKVTLHPGLPDIIKQPDSESQNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALRINNLSLTHPDEVSQALSLLLTQQSAQFTIRRNGVPRLINVSVGELTGMNGLRHERTQ", - "protein_translation_length": 271, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010879" - ], - [ - "gene_synonym", - "JW5707" - ], - [ - "gene_synonym", - "gspD" - ], - [ - "gene_synonym", - "yheF" - ], - [ - "gene_synonym", - "ECK3312" - ], - [ - "gene_synonym", - "GI:90111569" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45758" - ], - [ - "gene_synonym", - "NP_417784.4" - ], - [ - "gene_synonym", - "b3325" - ], - [ - "gene_synonym", - "GeneID:947822" - ], - [ - "gene_synonym", - "EcoGene:EG12890" - ] - ], - "dna_sequence": "ATGAAAGGACTCAATAAAATCACCTGCTGCTTGCTGGCAGCACTACTCATGCCTTGTGCAGGACACGCTGAGAACGAACAATACGGCGCGAACTTCAATAACGCCGATATCCGCCAGTTCGTGGAAATAGTGGGTCAGCATCTTGGCAAAACGATCCTGATCGACCCTTCGGTACAGGGAACCATTTCCGTACGCAGTAATGATACGTTTAGCCAACAGGAGTACTACCAGTTCTTTTTAAGTATTCTTGATCTTTACGGTTATTCCGTGATCACGCTGGACAATGGTTTTCTGAAAGTGGTTCGCTCAGCTAATGTAAAAACATCGCCAGGGATGATTGCTGACAGTTCTCGTCCAGGCGTAGGTGATGAGTTGGTCACCCGAATTGTACCGCTTGAGAACGTTCCTGCTCGTGACCTGGCCCCCCTGCTCCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTCGCCGAGATTCTTAATCAATTAATCAGCGAAAGCCACGGTAAAAGCCAGATGCCAGCCCTCCTCTCCGCGAAGATTGTGGCGGATAAGCGAACCAACTCTCTTATCATCAGTGGACCGGAAAAAGCACGCCAGCGCATCACTTCATTACTGAAAAGCCTTGATGTCGAAGAGAGCGAGGAAGGAAATACCCGGGTTTATTACCTGAAATATGCTAAAGCCACGAATCTGGTGGAAGTGCTAACCGGTGTTTCCGAAAAGCTGAAAGATGAAAAAGGGAATGCGCGTAAGCCCTCCTCTTCTGGCGCGATGGATAACGTCGCCATTACCGCCGATGAACAGACTAACTCTCTGGTCATTACCGCTGACCAGTCCGTCCAGGAAAAACTCGCCACGGTAATTGCGCGTCTGGACATTCGCCGTGCACAGGTGCTGGTTGAGGCAATCATCGTTGAAGTTCAGGATGGAAATGGACTAAACCTCGGCGTGCAATGGGCGAATAAAAACGTTGGCGCACAGCAATTTACCAATACCGGATTACCGATTTTTAACGCTGCGCAAGGTGTGGCTGATTATAAAAAGAATGGTGGGATCACCAGCGCGAATCCTGCCTGGGATATGTTTAGCGCCTACAATGGCATGGCCGCAGGCTTCTTCAATGGCGACTGGGGAGTACTGCTTACCGCGCTGGCCAGTAACAATAAAAATGACATCCTCGCCACCCCAAGCATCGTAACGCTGGATAATAAACTCGCGTCCTTCAACGTGGGGCAGGATGTGCCGGTGCTATCCGGGTCACAGACCACTTCAGGGGATAACGTCTTTAATACCGTCGAACGCAAAACGGTGGGGACAAAACTCAAAGTTACTCCGCAGGTCAATGAAGGCGACGCGGTGTTGCTCGAAATAGAGCAGGAAGTCTCCAGCGTTGACTCTTCCTCTAACTCGACGCTCGGCCCGACGTTTAATACCCGTACTATTCAAAACGCCGTGCTGGTCAAAACCGGTGAAACGGTGGTCCTGGGCGGATTGCTGGATGATTTTTCTAAAGAGCAAGTGTCAAAGGTTCCTCTGCTTGGCGATATTCCTTTAGTGGGGCAACTCTTCCGCTATACCTCCACCGAGCGCGCTAAACGCAACCTGATGGTATTTATCCGTCCGACGATTATCCGTGACGATGATGTTTATCGCTCACTGTCAAAAGAGAAATACACCCGTTACCGTCAGGAGCAACAACAGCGGATCGACGGGAAATCAAAAGCGCTGGTTGGCTCGGAAGATTTGCCGGTGCTGGATGAAAACACGTTCAACAGTCACGCCCCTGCGCCATCGTCACGGTGA", 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"protein_translation_length": 650, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010881" - ], - [ - "gene_synonym", - "yheG" - ], - [ - "gene_synonym", - "GI:16131205" - ], - [ - "gene_synonym", - "ECK3313" - ], - [ - "gene_synonym", - "gspE" - ], - [ - "gene_synonym", - "JW3288" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45759" - ], - [ - "gene_synonym", - "b3326" - ], - [ - "gene_synonym", - "NP_417785.1" - ], - [ - "gene_synonym", - "EcoGene:EG12891" - ], - [ - "gene_synonym", - "GeneID:947823" - ] - ], - "dna_sequence": "ATGAGAATTCACTCACCGTACCCCGCCAGTTGGGCGCTGGCACAACGAATTGGTTATCTCTATTCAGAGGGCGAGATTATTTATCTCGCCGATACGCCATTCGAGCGGTTACTCGATATTCAACGTCAGGTTGGCCAGTGCCAGACCATGACCAGCTTGTCACAGGCTGATTTTGAAGCTCGGCTGGAAGCGGTATTCCATCAGAATACCGGTGAGTCGCAACAGATTGCGCAGGATATCGATCAATCCGTCGATCTTCTCTCGCTTTCGGAAGAGATGCCCGCAAATGAAGATCTCCTGAATGAAGATTCAGCGGCACCGGTTATCCGCTTGATCAATGCGATTTTGAGTGAGGCCATCAAAGAAACCGCCTCTGATATCCACATTGAAACCTATGAAAAAACAATGTCGATCCGTTTTCGCATCGACGGCGTTTTGCGGACAATTTTACAGCCAAACAAAAAACTGGCGGCACTGCTTATCTCCCGAATTAAGGTCATGGCTCGTCTTGATATCGCCGAAAAACGTATTCCACAGGATGGAAGAATTAGTTTGCGTATCGGGCGACGTAACATAGATGTCCGCGTATCCACACTGCCGTCCATCTATGGTGAACGCGCCGTACTCCGCCTGCTGGATAAAAACAGCCTCCAGCTTTCATTGAACAACCTGGGGATGACGGCAGCGGATAAGCAGGATTTAGAAAATCTCATTCAGCTTCCGCACGGTATTATCCTGGTGACAGGGCCGACAGGCTCCGGTAAAAGCACCACGCTCTACGCCATCCTTTCGGCGCTGAATACTCCCGGCCGCAATATTCTGACGGTAGAAGATCCCGTGGAATATGAGCTGGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCATCAGGCGCAGTGACCCGGCTCCGCGACATGGGCGTCGAATCATTCCTGCTTTCGTCTTCCCTGGCAGGGATTATCGCGCAACGTCTGGTTCGTCGCCTGTGTCCGCAATGCCGACAATTCACGCCCGTATCACCCCAACAAGCGCAGATGTTTAAATATCATCAGCTCGCGGTGACAACAATTGGCACTCCCGTAGGCTGCCCTCATTGCCATCAATCCGGCTATCAGGGGCGCATGGCGATCCACGAAATGATGGTGGTGACGCCGGAATTACGGGCCGCTATTCATGAAAATGTGGATGAACAAGCACTGGAGCGACTAGTCCGGCAACAACACAAGGCCTTAATCAAAAATGGCCTGCAAAAAGTGATAAGCGGTGACACCTCCTGGGATGAGGTTATGCGCGTCGCCAGTGCCACGCTGGAGAGCGAAGCATGA", - "dna_sequence_length": 1482, - "functions": [ - "general secretory pathway component, cryptic" - ], - "id": "CDS_3264", - "location": [ - [ - "NC_000913", - 3458339, - "+", - 1482 - ] - ], - "md5": "5b2594d876f6e2a880eb00a1c4f6dbed", - "parent_gene": "", - "protein_md5": "c25c5cdc75b23e024b013a0adda4365b", - "protein_translation": "MRIHSPYPASWALAQRIGYLYSEGEIIYLADTPFERLLDIQRQVGQCQTMTSLSQADFEARLEAVFHQNTGESQQIAQDIDQSVDLLSLSEEMPANEDLLNEDSAAPVIRLINAILSEAIKETASDIHIETYEKTMSIRFRIDGVLRTILQPNKKLAALLISRIKVMARLDIAEKRIPQDGRISLRIGRRNIDVRVSTLPSIYGERAVLRLLDKNSLQLSLNNLGMTAADKQDLENLIQLPHGIILVTGPTGSGKSTTLYAILSALNTPGRNILTVEDPVEYELEGIGQTQVNTRVDMSFARGLRAILRQDPDVVMVGEIRDTETAQIAVQASLTGHLVLSTLHTNSASGAVTRLRDMGVESFLLSSSLAGIIAQRLVRRLCPQCRQFTPVSPQQAQMFKYHQLAVTTIGTPVGCPHCHQSGYQGRMAIHEMMVVTPELRAAIHENVDEQALERLVRQQHKALIKNGLQKVISGDTSWDEVMRVASATLESEA", - "protein_translation_length": 493, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131206" - ], - [ - "gene_synonym", - "gspF" - ], - [ - "gene_synonym", - "ASAP:ABE-0010883" - ], - [ - "gene_synonym", - "EcoGene:EG12885" - ], - [ - "gene_synonym", - "hofF" - ], - [ - "gene_synonym", - "ECK3314" - ], - [ - "gene_synonym", - "JW3289" - ], - [ - "gene_synonym", - "b3327" - ], - [ - "gene_synonym", - "GeneID:947829" - ], - [ - "gene_synonym", - "NP_417786.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P41441" - ], - [ - "gene_synonym", - "hopF" - ] - ], - "dna_sequence": "ATGAATTATCGCTATCGCGCCATGACCCAGGATGGTCAAAAATTGCAAGGGATCATTGATGCTAACGATGAACGTCAGGCACGACTGCGGCTGCGTGAAGAAGGGCTTTTCCTGCTGGATATTCGCCCCCAAAAAAGTTCGGGAGTAAAAACACGTCGCCCGAGGATCAGCCATAGTGAACTGACGCTTTTCACCCGGCAGTTGGCAACCTTAAGCGCAGCGGCATTACCCCTGGAAGAGAGCCTTGCCGTAATCGGTCAACAAAGCAGTAATAAACGACTGGGTGACGTGTTAAATCAGGTACGCAGCGCCATCCTTGAAGGGCATCCCCTTTCCGATGCATTACAGCATTTTCCCACGCTTTTCGATTCGCTCTATCGTACCCTGGTAAAAGCGGGCGAAAAGAGCGGGCTGCTGGCCCCGGTGTTGGAAAAGCTGGCTGATTACAATGAAAACCGGCAGAAAATCCGCAGCAAGCTCATTCAGTCACTGATCTACCCCTGTATGCTCACTACGGTGGCGATTGGGGTCGTGATTATTCTCCTCACTGCTGTCGTGCCCAAAATTACCGAACAGTTCGTGCATATGAAGCAGCAACTGCCGCTGAGTACACGCATTCTTTTAGGTCTGAGCGACACGTTGCAACGTACCGGCCCGACATTATTAGCGACAGTGTTTATTGTCGCTGTAGGTTTCTGGCTCTGGTTAAAACGCGGCAATAACCGCCACCGTTTTCATGCCATGTTGCTGCGCGTTGCGCTCATCGGCCCGCTGATTTGCGCCATTAACAGCGCACGCTATCTCCGCACTTTAAGTATTTTGCAATCCAGCGGCGTCCCTCTGCTGGATGGGATGAATTTGTCCACCGAAAGCCTCAACAACCTCGAAATTCGCCAGCGTCTGGCAAATGCGGCAGAGAACGTTCGCCAGGGTAACAGCATTCATCTTTCGCTGGAACAAACCGCAATTTTCCCGCCGATGATGCTCTACATGGTGGCCTCTGGCGAAAAAAGCGGGCAGCTCGGCACATTAATGGTCAGAGCCGCAGATAACCAGGAGACACTCCAACAAAATCGGATCGCCTTAACGCTCTCCATCTTCGAGCCAGCACTCATTATTACGATGGCACTGATCGTCCTGTTTATTGTCGTGTCGGTACTCCAACCTCTTCTTCAACTTAACTCAATGATTAATTAA", - "dna_sequence_length": 1197, - "functions": [ - "general secretory pathway component, cryptic" - ], - "id": "CDS_3265", - "location": [ - [ - "NC_000913", - 3459817, - "+", - 1197 - ] - ], - "md5": "9cded691a74d245c6c48e47807c515da", - "parent_gene": "", - "protein_md5": "4cee4712a4c52a881886d4ad48ab1cde", - "protein_translation": "MNYRYRAMTQDGQKLQGIIDANDERQARLRLREEGLFLLDIRPQKSSGVKTRRPRISHSELTLFTRQLATLSAAALPLEESLAVIGQQSSNKRLGDVLNQVRSAILEGHPLSDALQHFPTLFDSLYRTLVKAGEKSGLLAPVLEKLADYNENRQKIRSKLIQSLIYPCMLTTVAIGVVIILLTAVVPKITEQFVHMKQQLPLSTRILLGLSDTLQRTGPTLLATVFIVAVGFWLWLKRGNNRHRFHAMLLRVALIGPLICAINSARYLRTLSILQSSGVPLLDGMNLSTESLNNLEIRQRLANAAENVRQGNSIHLSLEQTAIFPPMMLYMVASGEKSGQLGTLMVRAADNQETLQQNRIALTLSIFEPALIITMALIVLFIVVSVLQPLLQLNSMIN", - "protein_translation_length": 398, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010885" - ], - [ - "gene_synonym", - "NP_417787.1" - ], - [ - "gene_synonym", - "JW3290" - ], - [ - "gene_synonym", - "EcoGene:EG12886" - ], - [ - "gene_synonym", - "gspG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P41442" - ], - [ - "gene_synonym", - "hofG" - ], - [ - "gene_synonym", - "ECK3315" - ], - [ - "gene_synonym", - "GeneID:947827" - ], - [ - "gene_synonym", - "hopG" - ], - [ - "gene_synonym", - "GI:16131207" - ], - [ - "gene_synonym", - "b3328" - ] - ], - "dna_sequence": "ATGCGCGCAACGGATAAGCAACGCGGTTTTACATTACTGGAAATTATGGTGGTGATCGTCATTATCGGCGTACTTGCCAGCCTGGTGGTTCCTAACCTAATGGGCAATAAAGAAAAGGCGGATAAGCAAAAAGCCGTCAGCGATATTGTGGCGCTGGAAAACGCCCTTGATATGTACAAACTCGACAATCATCACTATCCAACCACAAATCAGGGGCTTGAATCCTTAGTAGAAGCGCCGACACTGCCACCGCTGGCCGCAAACTATAACAAGGAAGGTTATATCAAGCGTCTGCCTGCCGATCCCTGGGGCAATGATTATGTCCTCGTTAATCCTGGTGAACATGGTGCATACGATCTGCTTTCAGCAGGGCCCGATGGTGAAATGGGAACCGAGGACGACATCACCAACTGGGGTTTGAGCAAGAAGAAAAAGTAA", - "dna_sequence_length": 438, - "functions": [ - "pseudopilin, cryptic, general secretion pathway" - ], - "id": "CDS_3266", - "location": [ - [ - "NC_000913", - 3461023, - "+", - 438 - ] - ], - "md5": "f00201e29f9197dbc3190e012c90cd43", - "parent_gene": "", - "protein_md5": "c23d95a028b95cb251542d6b0d4378e5", - "protein_translation": "MRATDKQRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKAVSDIVALENALDMYKLDNHHYPTTNQGLESLVEAPTLPPLAANYNKEGYIKRLPADPWGNDYVLVNPGEHGAYDLLSAGPDGEMGTEDDITNWGLSKKKK", - "protein_translation_length": 145, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3291" - ], - [ - "gene_synonym", - "hofH" - ], - [ - "gene_synonym", - "EcoGene:EG12887" - ], - [ - "gene_synonym", - "gspH" - ], - [ - "gene_synonym", - "ASAP:ABE-0010888" - ], - [ - "gene_synonym", - "NP_417788.1" - ], - [ - "gene_synonym", - "ECK3316" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P41443" - ], - [ - "gene_synonym", - "hopH" - ], - [ - "gene_synonym", - "GeneID:947834" - ], - [ - "gene_synonym", - "b3329" - ], - [ - "gene_synonym", - "GI:16131208" - ] - ], - "dna_sequence": "ATGAATCAGCAACGCGGGTTTACCCTGCTGGAGATGATGCTGGTGCTGGCGCTGGTCGCTATCACGGCAAGCGTGGTGCTCTTCACATATGGCCGGGAGGATGTCGCCAGCACTCGTGCGCGCGAAACAGCGGCGCGGTTTACCGCTGCACTTGAATTAGCCATCGACCGCGCCACGCTCAGTGGTCAGCCTGTCGGTATCCATTTCTCTGATTCAGCATGGCGCATTATGGTACCGGGCAAAACACCATCAGCCTGGCGCTGGGTTCCATTACAAGAAGATGCCGCAGACGAGAGCCAAAATGACTGGGATGAAGAACTCTCAATTCATCTTCAGCCATTTAAACCTGATGACAGCAACCAGCCACAGGTTGTGATTCTGGCCGACGGACAAATCACGCCCTTCTCTTTGTTGATGGCTAACGCCGGGACCGGTGAGCCGCTCCTGACGTTAGTCTGTTCAGGCTCATGGCCCCTGGATCAAACGCTCGCCAGAGATACCCGCCCATGA", - "dna_sequence_length": 510, - "functions": [ - "putative general secretory pathway component, cryptic" - ], - "id": "CDS_3267", - "location": [ - [ - "NC_000913", - 3461468, - "+", - 510 - ] - ], - "md5": "fc18a75e1f3abab8fc77d0f1b1e41ef6", - "parent_gene": "", - "protein_md5": "268043c9390086e3cf73d8f78f697432", - "protein_translation": "MNQQRGFTLLEMMLVLALVAITASVVLFTYGREDVASTRARETAARFTAALELAIDRATLSGQPVGIHFSDSAWRIMVPGKTPSAWRWVPLQEDAADESQNDWDEELSIHLQPFKPDDSNQPQVVILADGQITPFSLLMANAGTGEPLLTLVCSGSWPLDQTLARDTRP", - "protein_translation_length": 169, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010890" - ], - [ - "gene_synonym", - "JW5706" - ], - [ - "gene_synonym", - "GI:90111570" - ], - [ - "gene_synonym", - "yheH" - ], - [ - "gene_synonym", - "gspI" - ], - [ - "gene_synonym", - "NP_417789.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45760" - ], - [ - "gene_synonym", - "b3330" - ], - [ - "gene_synonym", - "ECK3317" - ], - [ - "gene_synonym", - "EcoGene:EG12892" - ], - [ - "gene_synonym", - "GeneID:947833" - ] - ], - "dna_sequence": "ATGAACAAACAATCAGGGATGACACTGCTTGAAGTCTTACTGGCGATGAGTATTTTCACCGCTGTTGCTCTGACTTTAATGAGCAGTATGCAAGGGCAACGAAATGCCATCGAGCGAATGCGTAACGAGACGCTGGCATTGTGGATAGCGGATAACCAGCTTCAGTCACAAGATTCATTCGGCGAGGAAAACACGTCCAGTTCTGGCAAAGAGTTAATAAATGGCGAAGAGTGGAACTGGCGCAGCGATATCCACTCAAGCAAAGACGGCACGCTTCTGGAACGCACCATAACGGTGACATTACCCAGCGGTCAGACAACCTCGCTTACGCGTTATCAAAGCATCGATAATAAATCCGGGCAGGCACAAGATGATTAA", - "dna_sequence_length": 378, - "functions": [ - "general secretory pathway component, cryptic" - ], - "id": "CDS_3268", - "location": [ - [ - "NC_000913", - 3461974, - "+", - 378 - ] - ], - "md5": "89e946505c7da8e24833a0167e4e2def", - "parent_gene": "", - "protein_md5": "cf609f9af98bf77b57a32eda6a2cb6ec", - "protein_translation": "MNKQSGMTLLEVLLAMSIFTAVALTLMSSMQGQRNAIERMRNETLALWIADNQLQSQDSFGEENTSSSGKELINGEEWNWRSDIHSSKDGTLLERTITVTLPSGQTTSLTRYQSIDNKSGQAQDD", - "protein_translation_length": 125, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3293" - ], - [ - "gene_synonym", - "ECK3318" - ], - [ - "gene_synonym", - "GI:16131210" - ], - [ - "gene_synonym", - "ASAP:ABE-0010892" - ], - [ - "gene_synonym", - "EcoGene:EG12893" - ], - [ - "gene_synonym", - "gspJ" - ], - [ - "gene_synonym", - "yheI" - ], - [ - "gene_synonym", - "NP_417790.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45761" - ], - [ - "gene_synonym", - "b3331" - ], - [ - "gene_synonym", - "GeneID:947832" - ] - ], - "dna_sequence": "ATGATTAATCGCCAGCAGGGTTTCACATTGCTGGAGGTCATGGCGGCGCTGGCGATTTTCTCAATGCTTAGCGTGCTGGCGTTTATGATTTTTTCGCAAGCTTCCGAGTTGCATCAACGCTCACAGAAAGAAATCCAGCAGTTCAATCAGCTACAGCGCACCATCACCATTCTTGATAACGATCTCCTGCAACTGGTCGCCCGGAGGAATCGGAGTACGGACAAAATCATGGTGTTGGGTGAAGAAGCTATTTTTACCACGCAAAGTCGCGATCCGCTGGCTCCTCTCAGTGAAGCACAAACCTTACTCACTGTTCACTGGTATCTGCGAAATCATACGCTCTACCGTGCTGTTCGTACTTCTGTGGATGGCAGGAAGGATCAACCCGCCCAGGCGATGCTGGAACATGTCGAGAGCTTTCTTCTGGAAAGTAACAGCGGGGAAAGCCAGGAACTTCCTCTCTCAGTCACGTTACATCTGCAGACTCAGCAATATGGGGGGTTACAGCGCCGTTTTGCATTACCTGAGCAGTTAGCGAGAGAAGAGTCGCCAGCTCAGACGCAGGCCGGGAATAATAACCATGAATAA", - "dna_sequence_length": 588, - "functions": [ - "putative general secretory pathway component, cryptic" - ], - "id": "CDS_3269", - "location": [ - [ - "NC_000913", - 3462344, - "+", - 588 - ] - ], - "md5": "66c252201038ef3067a2c34a47338479", - "parent_gene": "", - "protein_md5": "a2ec8e0d0f617aaedd14a57a2e74a2af", - "protein_translation": "MINRQQGFTLLEVMAALAIFSMLSVLAFMIFSQASELHQRSQKEIQQFNQLQRTITILDNDLLQLVARRNRSTDKIMVLGEEAIFTTQSRDPLAPLSEAQTLLTVHWYLRNHTLYRAVRTSVDGRKDQPAQAMLEHVESFLLESNSGESQELPLSVTLHLQTQQYGGLQRRFALPEQLAREESPAQTQAGNNNHE", - "protein_translation_length": 195, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3319" - ], - [ - "gene_synonym", - "NP_417791.1" - ], - [ - "gene_synonym", - "GI:16131211" - ], - [ - "gene_synonym", - "ASAP:ABE-0010894" - ], - [ - "gene_synonym", - "JW3294" - ], - [ - "gene_synonym", - "gspK" - ], - [ - "gene_synonym", - "yheJ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45762" - ], - [ - "gene_synonym", - "b3332" - ], - [ - "gene_synonym", - "GeneID:947831" - ], - [ - "gene_synonym", - "EcoGene:EG12894" - ] - ], - "dna_sequence": "ATGAATAATGAACAACGCGGCGTCGCGCTGCTCATTGTACTCATGTTACTGGCGCTCATGGCTGCTCTGGCAGCAGACATGACGCTCAGTTTTCACAGCCAGCTTCAGCGAACCCGCCAGGTAAACCATCATCTGCAACGGCAATATGATATTGAACTGGCGGAGAAACTTGCGCTTGCCAGCCTCACCCAGGACGTTAAAGATAACGACAGACAGACCACGTTGCAGCAGTACTGGGCACAGCCACAACAGTTGCAGCTGGAAGATGGCAATACAGTGAAGTGGCAGTTACGCGATGCCCAGCACTGTTTTAATCTCAATGCGTTAGCAAAAATCTCTGACGACCCGCTGGCTTCCCCTGATTTCCCCGCCCAGGTATTCAGTGCGCTGCTGATTAACGCCGGTATCGATCGCGGAAACACCGATGAGATCGTGCAATCAATCGCTGACTATATTGATGTCGATGACTCACCACGCTTTCACGGCGCAGAAGATAGCTTTTACCAAAGCCAGACGCCGCCCCGGCATAGTGCCAATCAGATGCTTTTTCTGACTGGCGAATTACGTCAGATAAAAGGCATAACCGAAAACATCTATCAGCGGCTTATCCCGTATGTCTGCGTTCTCCCGACCACGGAACTTAGCATCAATCTTAATATGCTAACGGAGAACGATATTCCGCTCTTCAGAGCGTTATTCCTCAATAACATCACGGATGCTGACGCTCGGGTCTTATTGCAAAAAAGGCCGAGGGAAGGCTGGCTAACCACGGATGCATTTCTTTACTGGGCGCAGCAGGATTTCTCCGGTGTGAAGCCACTGGTTGCTCAGGTGAAAAGGCATCTCTTTCCCTATAGCCGCTATTTTACGCTGAGTACGGAAAGTATCAGCGACGAACAATCCCAGGGATGGCAAAGCCATATTTTTTTCAACCGTAAACAGCAGAGCGCCCAAATCTATCGGCGTACGCTGCAACTCTACTAA", - "dna_sequence_length": 984, - "functions": [ - "general secretory pathway component, cryptic" - ], - "id": "CDS_3270", - "location": [ - [ - "NC_000913", - 3462924, - "+", - 984 - ] - ], - "md5": "a83bb5d7a8ba2d40d0fda5b761789d4d", - "parent_gene": "", - "protein_md5": "37ea5be6c58fc9d5adc2e50992d58182", - "protein_translation": "MNNEQRGVALLIVLMLLALMAALAADMTLSFHSQLQRTRQVNHHLQRQYDIELAEKLALASLTQDVKDNDRQTTLQQYWAQPQQLQLEDGNTVKWQLRDAQHCFNLNALAKISDDPLASPDFPAQVFSALLINAGIDRGNTDEIVQSIADYIDVDDSPRFHGAEDSFYQSQTPPRHSANQMLFLTGELRQIKGITENIYQRLIPYVCVLPTTELSINLNMLTENDIPLFRALFLNNITDADARVLLQKRPREGWLTTDAFLYWAQQDFSGVKPLVAQVKRHLFPYSRYFTLSTESISDEQSQGWQSHIFFNRKQQSAQIYRRTLQLY", - "protein_translation_length": 327, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12895" - ], - [ - "gene_synonym", - "ASAP:ABE-0010896" - ], - [ - "gene_synonym", - "GI:90111571" - ], - [ - "gene_synonym", - "JW5705" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45763" - ], - [ - "gene_synonym", - "yheK" - ], - [ - "gene_synonym", - "ECK3320" - ], - [ - "gene_synonym", - "gspL" - ], - [ - "gene_synonym", - "GeneID:947842" - ], - [ - "gene_synonym", - "b3333" - ], - [ - "gene_synonym", - "NP_417792.2" - ] - ], - "dna_sequence": "ATGCCTGAATCGTTGATGGTCATACGTTCTTCCTCGACGCTGCGTAAGCATTGGGAATGGATGACGTTCTCCGCAGATAGCGTATCTTCGGTACATACGCTCACGGACGATCTTCCGCTGGAGTCGCTGGCCGATCAGCCCGGTGCCGGAAATGTTCATCTTTTGATCCCACCAGAGGGCCTTTTATATCGTTCCCTCACGCTGCCCAACGCCAAATACAAACTCACCGCACAAACATTACAATGGCTGGCAGAGGAGACGTTACCCGACAACACCCAGGACTGGCACTGGACGGTTGTCGATAAACAAAACGAAAGTGTCGAGGTGATAGGCATTCAGTCGGAGAAACTCAGTCGCTATCTTGAGCGTTTACATACTGCCGGACTCAACGTGACGCGGGTTTTGCCAGATGGCTGCTATCTTCCCTGGGAAGTAGATAGCTGGACTCTGGTTAACCAGCAAACAAGCTGGCTCATTCGCAGTGCCGCACATGCCTTCAACGAACTGGATGAACACTGGTTACAGCATCTTGCTGCCCAGTTTCCGCCTGAGAATATGCTTTGTTATGGTGTAGTACCTCACGGCGTTGCAGCGGCCAATCCACTTATCCAGCATCCTGAAATACCATCACTGAGTTTGTATTCTGCCGATATTGCATTCCAGCGCTATGACATGCTGCATGGTATTTTTCGTAAACAGAAAACTGTAAGCAAATCGGGAAAATGGCTCGCCCGCCTGGCAGTAAGCTGTCTCGTTCTCGCCATTCTTTCTTTTGTTGGCAGCCGGAGCATCGCGCTCTGGCATACGCTTAAGATTGAAGATCAACTTCAGCAACAACAGCAAGAAACCTGGCAACGTTATTTCCCGCAGATCAAACGCACCCACAATTTTCGTTTTTACTTTAAGCAGCAACTCGCTCAGCAATATCCTGAAGCTGTGCCGTTGCTCTATCATTTACAAACACTTCTGCTGGAACACCCTGAACTGCAGTTAATGGAGGCGAACTATAGCCAGAAGCAAAAGTCGCTGACCTTAAAAATGAGTGCTAAGAGTGAAGCTAATATCGATCGTTTCTGTGAGTTAACACAGTCCTGGCTTCCGATGGAAAAAACAGAAAAAGATCCGGTCAGTGGTGTATGGACAGTAAGGAACTCAGGGAAATGA", - "dna_sequence_length": 1164, - "functions": [ - "general secretory pathway component, cryptic" - ], - "id": "CDS_3271", - "location": [ - [ - "NC_000913", - 3463922, - "+", - 1164 - ] - ], - "md5": "774d693824fc33515d647a66e5b95ca8", - "parent_gene": "", - "protein_md5": "bc63cb993d4fc125cf0565bfe89f0a2e", - "protein_translation": "MPESLMVIRSSSTLRKHWEWMTFSADSVSSVHTLTDDLPLESLADQPGAGNVHLLIPPEGLLYRSLTLPNAKYKLTAQTLQWLAEETLPDNTQDWHWTVVDKQNESVEVIGIQSEKLSRYLERLHTAGLNVTRVLPDGCYLPWEVDSWTLVNQQTSWLIRSAAHAFNELDEHWLQHLAAQFPPENMLCYGVVPHGVAAANPLIQHPEIPSLSLYSADIAFQRYDMLHGIFRKQKTVSKSGKWLARLAVSCLVLAILSFVGSRSIALWHTLKIEDQLQQQQQETWQRYFPQIKRTHNFRFYFKQQLAQQYPEAVPLLYHLQTLLLEHPELQLMEANYSQKQKSLTLKMSAKSEANIDRFCELTQSWLPMEKTEKDPVSGVWTVRNSGK", - "protein_translation_length": 387, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hopZ" - ], - [ - "gene_synonym", - "GI:90111572" - ], - [ - "gene_synonym", - "JW5704" - ], - [ - "gene_synonym", - "pshM" - ], - [ - "gene_synonym", - "EcoGene:EG12173" - ], - [ - "gene_synonym", - "GeneID:947841" - ], - [ - "gene_synonym", - "ECK3321" - ], - [ - "gene_synonym", - "gspM" - ], - [ - "gene_synonym", - "NP_417793.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36678" - ], - [ - "gene_synonym", - "b3334" - ], - [ - "gene_synonym", - "ASAP:ABE-0010898" - ] - ], - "dna_sequence": "ATGATTAAATCATGGTGGGCAGAAAAATCCACATCGGAAAAACAGATCGTTGCGGCACTGGCGGTTCTCTCGCTCGGCGTTTTTTGTTGGCTTGGGGTGATAAAACCGATAGATACCTACATTGCAGAGCATCAGTCCCACGCGCAAAAAATTAAGAAGGACATCAAATGGATGCAGGATCAAGCGAGCACCCATGGTTTACTCGGTCATCCTGCGCTTACGCAGCCCATCAAAAATATCCTTCTCGAGGAAGCAAAACGTGAGAATTTGGCTATCACGCTGGAAAACGGCCCGGACAATACTCTGACAATTCATCCTGTCACAGCTCCCCTCGAAAACGTCTCCCGCTGGCTCACTACGGCACAGGTAACATACGGTATTGTTATTGAAGACCTTCAGTTTACTCTTGCCGGAAACGAAGAGATCACCCTCAGGCATTTGTCCTTCAGGGAGCAACAATAA", - "dna_sequence_length": 462, - "functions": [ - "general secretory pathway component, cryptic" - ], - "id": "CDS_3272", - "location": [ - [ - "NC_000913", - 3465082, - "+", - 462 - ] - ], - "md5": "c4c097985c226b1641f6d8a26fed678e", - "parent_gene": "", - "protein_md5": "e0cfeb5e390632c70f5684527b5f0475", - "protein_translation": "MIKSWWAEKSTSEKQIVAALAVLSLGVFCWLGVIKPIDTYIAEHQSHAQKIKKDIKWMQDQASTHGLLGHPALTQPIKNILLEEAKRENLAITLENGPDNTLTIHPVTAPLENVSRWLTTAQVTYGIVIEDLQFTLAGNEEITLRHLSFREQQ", - "protein_translation_length": 153, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yheC" - ], - [ - "gene_synonym", - "JW3297" - ], - [ - "gene_synonym", - "GI:16131214" - ], - [ - "gene_synonym", - "hofD" - ], - [ - "gene_synonym", - "gspO" - ], - [ - "gene_synonym", - "ECK3322" - ], - [ - "gene_synonym", - "GeneID:947840" - ], - [ - "gene_synonym", - "ASAP:ABE-0010901" - ], - [ - "gene_synonym", - "hopO" - ], - [ - "gene_synonym", - "b3335" - ], - [ - "gene_synonym", - "EcoGene:EG11359" - ], - [ - "gene_synonym", - "NP_417794.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25960" - ], - [ - "gene_synonym", - "hopD" - ] - ], - "dna_sequence": "ATGACAATGCTACTGCCGCTCTTCATTCTGGTTGGTTTTATTGCAGATTATTTTGTTAATGCCATCGCCTATCACCTCTCGCCGTTGGAGGATAAAACGGCGTTAACGTTTCGCCAGGTATTGGTTCATTTCAGGCAAAAAAAATATGCCTGGCATGATACAGTGCCCCTGATACTTTGTGTTGCTGCTGCTATCGCCTGCGCCCTGGCACCTTTCACGCCCATCGTGACTGGCGCACTCTTTCTCTATTTCTGTTTCGTACTCACGCTCAGTGTTATTGATTTTCGCACTCAGCTCCTGCCCGACAAACTCACCTTACCGCTGCTCTGGCTTGGCTTGGTATTTAATGCGCAGTATGGATTAATTGATTTACATGATGCGGTTTACGGCGCGGTAGCGGGCTATGGGGTGCTGTGGTGTGTTTACTGGGGCGTCTGGTTAGTTTGTCACAAAGAGGGATTGGGCTACGGTGATTTCAAGCTACTGGCCGCTGCAGGCGCATGGTGTGGCTGGCAAACGTTGCCAATGATACTGCTGATTGCCTCGCTGGGTGGCATTGGTTACGCCATCGTTTCACAACTTCTGCAACGCCGGACTATAACCACTATCGCATTCGGCCCGTGGCTTGCGCTCGGCAGCATGATAAACCTGGGGTATCTGGCCTGGATCTCTTATTAA", - "dna_sequence_length": 678, - "functions": [ - "bifunctional prepilin leader peptidase/ methylase" - ], - "id": "CDS_3273", - "location": [ - [ - "NC_000913", - 3465543, - "+", - 678 - ] - ], - "md5": "403fcc3b8ceda2226144cb549a53494f", - "parent_gene": "", - "protein_md5": "160cb216dbef65beca93c87be384bc60", - "protein_translation": "MTMLLPLFILVGFIADYFVNAIAYHLSPLEDKTALTFRQVLVHFRQKKYAWHDTVPLILCVAAAIACALAPFTPIVTGALFLYFCFVLTLSVIDFRTQLLPDKLTLPLLWLGLVFNAQYGLIDLHDAVYGAVAGYGVLWCVYWGVWLVCHKEGLGYGDFKLLAAAGAWCGWQTLPMILLIASLGGIGYAIVSQLLQRRTITTIAFGPWLALGSMINLGYLAWISY", - "protein_translation_length": 225, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131215" - ], - [ - "gene_synonym", - "JW3298" - ], - [ - "gene_synonym", - "NP_417795.1" - ], - [ - "gene_synonym", - "GeneID:947839" - ], - [ - "gene_synonym", - "ECK3323" - ], - [ - "gene_synonym", - "bfr" - ], - [ - "gene_synonym", - "b3336" - ], - [ - "gene_synonym", - "ASAP:ABE-0010903" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABD3" - ], - [ - "gene_synonym", - "EcoGene:EG10113" - ] - ], - "dna_sequence": "ATGAAAGGTGATACTAAAGTTATAAATTATCTCAACAAACTGTTGGGAAATGAGCTTGTCGCAATCAATCAGTACTTTCTCCATGCCCGAATGTTTAAAAACTGGGGTCTCAAACGTCTCAATGATGTGGAGTATCATGAATCCATTGATGAGATGAAACACGCCGATCGTTATATTGAGCGCATTCTTTTTCTGGAAGGTCTTCCAAACTTACAGGACCTGGGCAAACTGAACATTGGTGAAGATGTTGAGGAAATGCTGCGTTCTGATCTGGCACTTGAGCTGGATGGCGCGAAGAATTTGCGTGAGGCAATTGGTTATGCCGATAGCGTTCATGATTACGTCAGCCGCGATATGATGATAGAAATTTTGCGTGATGAAGAAGGCCATATCGACTGGCTGGAAACGGAACTTGATCTGATTCAGAAGATGGGCCTGCAAAATTATCTGCAAGCACAGATCCGCGAAGAAGGTTGA", - "dna_sequence_length": 477, - "functions": [ - "bacterioferritin, iron storage and detoxification protein" - ], - "id": "CDS_3274", - "location": [ - [ - "NC_000913", - 3466725, - "-", - 477 - ] - ], - "md5": "b6840aca2665190a8f38b652b7becf0a", - "parent_gene": "", - "protein_md5": "41794e2f15274aa8e594ce47f97a857d", - "protein_translation": "MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMGLQNYLQAQIREEG", - "protein_translation_length": 158, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yheA" - ], - [ - "gene_synonym", - "GI:16131216" - ], - [ - "gene_synonym", - "bfd" - ], - [ - "gene_synonym", - "ECK3324" - ], - [ - "gene_synonym", - "JW3299" - ], - [ - "gene_synonym", - "ASAP:ABE-0010906" - ], - [ - "gene_synonym", - "EcoGene:EG11181" - ], - [ - "gene_synonym", - "GeneID:947836" - ], - [ - "gene_synonym", - "b3337" - ], - [ - "gene_synonym", - "NP_417796.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE56" - ] - ], - "dna_sequence": "ATGTACGTTTGTCTTTGTAATGGTATCAGCGATAAAAAAATTCGTCAGGCTGTGCGCCAGTTTTCCCCTCACTCGTTCCAGCAATTAAAAAAATTTATTCCGGTCGGCAATCAGTGCGGTAAATGTGTCCGGGCCGCGCGTGAAGTGATGGAGGATGAATTAATGCAGCTGCCGGAGTTTAAGGAGTCCGCATAA", - "dna_sequence_length": 195, - "functions": [ - "bacterioferritin-associated ferredoxin" - ], - "id": "CDS_3275", - "location": [ - [ - "NC_000913", - 3466991, - "-", - 195 - ] - ], - "md5": "541f02820c779ec2f478fe185cacd1b0", - "parent_gene": "", - "protein_md5": "f7eedf512dcd2ecef19d0652fbafd476", - "protein_translation": "MYVCLCNGISDKKIRQAVRQFSPHSFQQLKKFIPVGNQCGKCVRAAREVMEDELMQLPEFKESA", - "protein_translation_length": 64, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yheB" - ], - [ - "gene_synonym", - "EcoGene:EG11237" - ], - [ - "gene_synonym", - "JW3300" - ], - [ - "gene_synonym", - "ECK3325" - ], - [ - "gene_synonym", - "GeneID:947837" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P13656" - ], - [ - "gene_synonym", - "b3338" - ], - [ - "gene_synonym", - "chiA" - ], - [ - "gene_synonym", - "ASAP:ABE-0010909" - ], - [ - "gene_synonym", - "NP_417797.1" - ], - [ - "gene_synonym", - "GI:16131217" - ] - ], - "dna_sequence": "ATGAAATTAAATATATTTACTAAATCTATGATTGGTATGGGGCTGGTGTGTTCCGCTCTGCCAGCATTGGCAATGGAAGCATGGAATAACCAACAAGGTGGTAATAAATATCAGGTTATTTTCGATGGCAAAATTTATGAAAATGCCTGGTGGGTTTCTTCTACAAATTGCCCGGGAAAAGCGAAAGCAAATGATGCAACTAACCCGTGGCGTTTAAAGCGTACCGCAACAGCTGCTGAAATTAGTCAGTTTGGCAATACACTTTCCTGCGAAAAGAGCGGCAGCTCATCTTCTTCAAATTCAAATACGCCTGCATCCAATACGCCGGCTAATGGCGGTTCGGCTACACCAGCACAGGGCACTGTTCCGTCTAATTCTTCTGTAGTTGCCTGGAATAAACAGCAGGGCGGTCAGACCTGGTATGTCGTCTTTAATGGTGCGGTATATAAAAATGCCTGGTGGGTAGCCTCTTCTAACTGTCCGGGTGATGCGAAAAGCAATGATGCCAGCAACCCATGGCGTTATGTTCGTGCCGCTACGGCAACGGAAATCTCAGAAACCAGTAATCCACAGTCCTGTACTTCAGCACCACAGCCTTCACCGGATGTGAAACCGGCACCGGACGTTAAACCGGCTCCTGATGTTCAGCCAGCCCCAGCTGATAAGTCAAACGACAACTATGCTGTAGTAGCCTGGAAAGGTCAGGAAGGTTCTTCTACATGGTACGTTATCTATAACGGCGGCATTTATAAGAACGCCTGGTGGGTAGGCGCGGCAAATTGCCCAGGCGATGCGAAAGAAAACGATGCCAGTAACCCATGGCGTTATGTTCGCGCGGCAACGGCAACAGAAATCAGCCAGTATGGTAACCCTGGCTCCTGTTCCGTTAAGCCGGATAATAATGGCGGTGCTGTGACTCCGGTTGATCCAACTCCGGAAACACCGGTGACCCCAACTCCGGATAACAGCGAGCCATCAACACCAGCGGATAGCGTTAACGATTACTCATTGCAAGCGTGGAGCGGCCAGGAAGGTAGCGAAATTTACCATGTTATTTTCAATGGTAATGTTTACAAGAACGCCTGGTGGGTTGGGTCTAAAGATTGCCCACGGGGTACCAGCGCTGAAAACTCCAATAACCCATGGCGTCTCGAGCGTACAGCTACCGCTGCGGAATTGAGTCAGTACGGTAACCCGACTACCTGTGAAATTGATAACGGCGGCGTCATTGTTGCGGATGGTTTCCAGGCCAGCAAAGCGTACAGCGCGGACAGCATCGTAGATTATAACGATGCACATTATAAAACTTCTGTCGATCAAGACGCATGGGGCTTTGTCCCGGGCGGCGATAACCCGTGGAAGAAATACGAACCGGCGAAAGCATGGTCCGCATCCACTGTGTACGTGAAAGGTGATCGCGTTGTTGTTGATGGGCAGGCTTATGAAGCGCTGTTCTGGACGCAAAGTGACAACCCTGCTCTGGTGGCGAACCAAAACGCCACCGGTAGCAATAGCCGCCCGTGGAAGCCGTTAGGTAAGGCTCAGAGCTATAGCAACGAAGAGCTGAATAATGCGCCGCAGTTTAATCCAGAAACGCTTTATGCCAGCGATACGCTGATTCGCTTTAACGGTGTGAACTACATTTCTCAGAGTAAAGTGCAGAAAGTTTCTCCTTCTGACAGCAACCCGTGGCGTGTTTTTGTTGACTGGACCGGAACCAAAGAGCGCGTAGGTACGCCGAAGAAAGCGTGGCCGAAACACGTTTATGCACCGTATGTCGACTTTACGCTGAATACGATCCCGGATCTGGCTGCGCTGGCTAAGAATCATAACGTCAACCACTTCACGCTGGCGTTTGTGGTGAGTAAAGATGCGAACACCTGTCTGCCGACATGGGGTACCGCTTACGGTATGCAGAATTACGCTCAGTACAGCAAAATCAAAGCTCTGCGTGAGGCTGGCGGCGATGTGATGCTGTCTATCGGTGGTGCTAACAACGCTCCGCTGGCTGCTTCCTGTAAGAACGTAGACGATCTGATGCAGCATTATTATGACATCGTTGATAACCTGAACCTCAAAGTCCTGGACTTCGATATCGAAGGCACCTGGGTTGCGGATCAGGCATCTATTGAACGTCGTAACCTTGCTGTGAAGAAAGTGCAGGATAAATGGAAGTCAGAAGGCAAAGATATTGCTATCTGGTACACCTTGCCAATTCTGCCGACTGGCCTGACGCCGGAAGGGATGAATGTCCTGAGCGATGCCAAAGCGAAAGGTGTTGAGCTGGCGGGTGTGAACGTGATGACAATGGACTACGGTAACGCGATTTGTCAGTCTGCAAATACCGAAGGCCAGAACATTCACGGTAAGTGTGCAACGTCTGCGATTGCCAACCTGCATTCACAATTGAAAGGCCTCCATCCCAATAAGAGCGATGCAGAAATTGACGCTATGATGGGTACCACGCCGATGGTTGGCGTGAACGACGTTCAGGGCGAGGTGTTCTATCTCTCTGATGCTCGTCTGGTCATGCAGGATGCGCAGAAGCGTAATCTCGGTATGGTTGGTATCTGGTCAATCGCGCGCGACCTGCCGGGCGGCACTAACCTGTCTCCGGAATTCCACGGCCTGACTAAAGAACAGGCACCGAAGTACGCATTTAGCGAAATCTTCGCGCCGTTTACTAAGCAATAA", - "dna_sequence_length": 2694, - "functions": [ - "periplasmic endochitinase" - ], - "id": "CDS_3276", - "location": [ - [ - "NC_000913", - 3469853, - "-", - 2694 - ] - ], - "md5": "7aaca0980c6e9410caac7a927c5ccf43", - "parent_gene": "", - "protein_md5": "f70fafe912a9c7b1d8b014bc14d588e1", - "protein_translation": "MKLNIFTKSMIGMGLVCSALPALAMEAWNNQQGGNKYQVIFDGKIYENAWWVSSTNCPGKAKANDATNPWRLKRTATAAEISQFGNTLSCEKSGSSSSSNSNTPASNTPANGGSATPAQGTVPSNSSVVAWNKQQGGQTWYVVFNGAVYKNAWWVASSNCPGDAKSNDASNPWRYVRAATATEISETSNPQSCTSAPQPSPDVKPAPDVKPAPDVQPAPADKSNDNYAVVAWKGQEGSSTWYVIYNGGIYKNAWWVGAANCPGDAKENDASNPWRYVRAATATEISQYGNPGSCSVKPDNNGGAVTPVDPTPETPVTPTPDNSEPSTPADSVNDYSLQAWSGQEGSEIYHVIFNGNVYKNAWWVGSKDCPRGTSAENSNNPWRLERTATAAELSQYGNPTTCEIDNGGVIVADGFQASKAYSADSIVDYNDAHYKTSVDQDAWGFVPGGDNPWKKYEPAKAWSASTVYVKGDRVVVDGQAYEALFWTQSDNPALVANQNATGSNSRPWKPLGKAQSYSNEELNNAPQFNPETLYASDTLIRFNGVNYISQSKVQKVSPSDSNPWRVFVDWTGTKERVGTPKKAWPKHVYAPYVDFTLNTIPDLAALAKNHNVNHFTLAFVVSKDANTCLPTWGTAYGMQNYAQYSKIKALREAGGDVMLSIGGANNAPLAASCKNVDDLMQHYYDIVDNLNLKVLDFDIEGTWVADQASIERRNLAVKKVQDKWKSEGKDIAIWYTLPILPTGLTPEGMNVLSDAKAKGVELAGVNVMTMDYGNAICQSANTEGQNIHGKCATSAIANLHSQLKGLHPNKSDAEIDAMMGTTPMVGVNDVQGEVFYLSDARLVMQDAQKRNLGMVGIWSIARDLPGGTNLSPEFHGLTKEQAPKYAFSEIFAPFTKQ", - "protein_translation_length": 897, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3301" - ], - [ - "gene_synonym", - "ECK3326" - ], - [ - "gene_synonym", - "EcoGene:EG11036" - ], - [ - "gene_synonym", - "kirT" - ], - [ - "gene_synonym", - "GeneID:947838" - ], - [ - "gene_synonym", - "tufA" - ], - [ - "gene_synonym", - "NP_417798.1" - ], - [ - "gene_synonym", - "pulT" - ], - [ - "gene_synonym", - "b3339" - ], - [ - "gene_synonym", - "GI:16131218" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CE47" - ], - [ - "gene_synonym", - "ASAP:ABE-0010912" - ] - ], - "dna_sequence": "GTGTCTAAAGAAAAATTTGAACGTACAAAACCGCACGTTAACGTTGGTACTATCGGCCACGTTGACCACGGTAAAACTACTCTGACCGCTGCAATCACCACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGTGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCTCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCGTGTTCCTGAACAAATGCGACATGGTTGATGACGAAGAGCTGCTGGAACTGGTTGAAATGGAAGTTCGTGAACTTCTGTCTCAGTACGACTTCCCGGGCGACGACACTCCGATCGTTCGTGGTTCTGCTCTGAAAGCGCTGGAAGGCGACGCAGAGTGGGAAGCGAAAATCCTGGAACTGGCTGGCTTCCTGGATTCTTATATTCCGGAACCAGAGCGTGCGATTGACAAGCCGTTCCTGCTGCCGATCGAAGACGTATTCTCCATCTCCGGTCGTGGTACCGTTGTTACCGGTCGTGTAGAACGCGGTATCATCAAAGTTGGTGAAGAAGTTGAAATCGTTGGTATCAAAGAGACTCAGAAGTCTACCTGTACTGGCGTTGAAATGTTCCGCAAACTGCTGGACGAAGGCCGTGCTGGTGAGAACGTAGGTGTTCTGCTGCGTGGTATCAAACGTGAAGAAATCGAACGTGGTCAGGTACTGGCTAAGCCGGGCACCATCAAGCCGCACACCAAGTTCGAATCTGAAGTGTACATTCTGTCCAAAGATGAAGGCGGCCGTCATACTCCGTTCTTCAAAGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGATCGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTTGCTAAAGTTCTGGGCTAA", 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[ - "gene_synonym", - "ECK3327" - ], - [ - "gene_synonym", - "NP_417799.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010914" - ], - [ - "gene_synonym", - "fusA" - ], - [ - "gene_synonym", - "EcoGene:EG10360" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6M8" - ], - [ - "gene_synonym", - "b3340" - ] - ], - "dna_sequence": "ATGGCTCGTACAACACCCATCGCACGCTACCGTAACATCGGTATCAGTGCGCACATCGACGCCGGTAAAACCACTACTACCGAACGTATTCTGTTCTACACCGGTGTAAACCATAAAATCGGTGAAGTTCATGACGGCGCTGCAACCATGGACTGGATGGAGCAGGAGCAGGAACGTGGTATTACCATCACTTCCGCTGCGACTACTGCATTCTGGTCTGGTATGGCTAAGCAGTATGAGCCGCATCGCATCAACATCATCGACACCCCGGGGCACGTTGACTTCACAATCGAAGTAGAACGTTCCATGCGTGTTCTCGATGGTGCGGTAATGGTTTACTGCGCAGTTGGTGGTGTTCAGCCGCAGTCTGAAACCGTATGGCGTCAGGCAAACAAATATAAAGTTCCGCGCATTGCGTTCGTTAACAAAATGGACCGCATGGGTGCGAACTTCCTGAAAGTTGTTAACCAGATCAAAACCCGTCTGGGCGCGAACCCGGTTCCGCTGCAGCTGGCGATTGGTGCTGAAGAACATTTCACCGGTGTTGTTGACCTGGTGAAAATGAAAGCTATCAACTGGAACGACGCTGACCAGGGCGTAACCTTCGAATACGAAGATATCCCGGCAGACATGGTTGAACTGGCTAACGAATGGCACCAGAACCTGATCGAATCCGCAGCTGAAGCTTCTGAAGAGCTGATGGAAAAATACCTGGGTGGTGAAGAACTGACTGAAGCAGAAATCAAAGGTGCTCTGCGTCAGCGCGTTCTGAACAACGAAATCATCCTGGTAACCTGTGGTTCTGCGTTCAAGAACAAAGGTGTTCAGGCGATGCTGGATGCGGTAATTGATTACCTGCCATCCCCGGTTGACGTACCTGCGATCAACGGTATCCTGGACGACGGTAAAGACACTCCGGCTGAACGTCACGCAAGTGATGACGAGCCGTTCTCTGCACTGGCGTTCAAAATCGCTACCGACCCGTTTGTTGGTAACCTGACCTTCTTCCGTGTTTACTCCGGTGTGGTTAACTCTGGTGATACCGTACTGAACTCCGTGAAAGCTGCACGTGAGCGTTTCGGTCGTATCGTTCAGATGCACGCTAACAAACGTGAAGAGATCAAAGAAGTTCGCGCGGGCGACATCGCTGCTGCTATCGGTCTGAAAGACGTAACCACTGGTGACACCCTGTGTGACCCGGATGCGCCGATCATTCTGGAACGTATGGAATTCCCTGAGCCGGTAATCTCCATCGCAGTTGAACCGAAAACCAAAGCTGACCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCTAAAGAAGACCCGTCTTTCCGTGTATGGACTGACGAAGAATCTAACCAGACCATCATCGCGGGTATGGGCGAACTGCACCTCGACATCATCGTTGACCGTATGAAGCGTGAATTCAACGTTGAAGCGAACGTAGGTAAACCGCAGGTTGCTTACCGTGAAACTATCCGCCAGAAAGTTACCGATGTTGAAGGTAAACACGCGAAACAGTCTGGTGGTCGTGGTCAGTATGGTCATGTTGTTATCGACATGTACCCGCTGGAGCCGGGTTCAAACCCGAAAGGCTACGAGTTCATCAACGACATTAAAGGTGGTGTAATCCCTGGCGAATACATCCCGGCCGTTGATAAAGGTATCCAGGAACAGCTGAAAGCAGGTCCGCTGGCAGGCTACCCGGTAGTAGACATGGGTATTCGTCTGCACTTCGGTTCTTACCATGACGTTGACTCCTCTGAACTGGCGTTTAAACTGGCTGCTTCTATCGCCTTTAAAGAAGGCTTTAAGAAAGCGAAACCAGTTCTGCTTGAGCCGATCATGAAGGTTGAAGTAGAAACTCCGGAAGAGAACACCGGTGACGTTATCGGTGACTTGAGCCGTCGTCGTGGTATGCTCAAAGGTCAGGAATCTGAAGTTACTGGCGTTAAGATCCACGCTGAAGTACCGCTGTCTGAAATGTTCGGATACGCAACTCAGCTGCGTTCTCTGACCAAAGGTCGTGCATCATACACTATGGAATTCCTGAAGTATGATGAAGCGCCGAGTAACGTTGCTCAGGCCGTAATTGAAGCCCGTGGTAAATAA", 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"MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKTRLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPLAGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLKYDEAPSNVAQAVIEARGK", - "protein_translation_length": 704, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rpsG" - ], - [ - "gene_synonym", - "GeneID:947846" - ], - [ - "gene_synonym", - "ECK3328" - ], - [ - "gene_synonym", - "JW3303" - ], - [ - "gene_synonym", - "GI:16131220" - ], - [ - "gene_synonym", - "NP_417800.1" - ], - [ - "gene_synonym", - "EcoGene:EG10906" - ], - [ - "gene_synonym", - "ASAP:ABE-0010917" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02359" - ], - [ - "gene_synonym", - "b3341" - ] - ], - "dna_sequence": "ATGCCACGTCGTCGCGTCATTGGTCAGCGTAAAATTCTGCCGGATCCGAAGTTCGGATCAGAACTGCTGGCTAAATTTGTAAATATCCTGATGGTAGATGGTAAAAAATCTACTGCTGAATCTATCGTATACAGCGCGCTGGAGACCCTGGCTCAGCGCTCTGGTAAATCTGAACTGGAAGCATTCGAAGTAGCTCTCGAAAACGTGCGCCCGACTGTAGAAGTTAAGTCTCGCCGCGTTGGTGGTTCTACTTATCAGGTACCAGTTGAAGTCCGTCCGGTTCGTCGTAATGCTCTGGCAATGCGTTGGATCGTTGAAGCTGCTCGTAAACGCGGTGATAAATCCATGGCTCTGCGCCTGGCGAACGAACTTTCTGATGCTGCAGAAAACAAAGGTACTGCAGTTAAGAAACGTGAAGACGTTCACCGTATGGCCGAAGCCAACAAGGCGTTCGCACACTACCGTTGGTTATCCCTTCGGAGTTTTAGTCACCAGGCGGGCGCTTCCAGTAAGCAGCCCGCTTTGGGCTACTTAAATTGA", - "dna_sequence_length": 540, - "functions": [ - "30S ribosomal subunit protein S7" - ], - "id": "CDS_3279", - "location": [ - [ - "NC_000913", - 3474081, - "-", - 540 - ] - ], - "md5": "50f324d9a9b2096853f52b067a66a9d8", - "parent_gene": "", - "protein_md5": "e6c4cdddb12f6fb632e0d7a24acabdd7", - "protein_translation": "MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRWLSLRSFSHQAGASSKQPALGYLN", - "protein_translation_length": 179, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417801.1" - ], - [ - "gene_synonym", - "JW3304" - ], - [ - "gene_synonym", - "ECK3329" - ], - [ - "gene_synonym", - "b3342" - ], - [ - "gene_synonym", - "GeneID:947845" - ], - [ - "gene_synonym", - "asuB" - ], - [ - "gene_synonym", - "GI:16131221" - ], - [ - "gene_synonym", - "rpsL" - ], - [ - "gene_synonym", - "EcoGene:EG10911" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7S3" - ], - [ - "gene_synonym", - "strA" - ], - [ - "gene_synonym", - "ASAP:ABE-0010919" - ] - ], - "dna_sequence": "ATGGCAACAGTTAACCAGCTGGTACGCAAACCACGTGCTCGCAAAGTTGCGAAAAGCAACGTGCCTGCGCTGGAAGCATGCCCGCAAAAACGTGGCGTATGTACTCGTGTATATACTACCACTCCTAAAAAACCGAACTCCGCGCTGCGTAAAGTATGCCGTGTTCGTCTGACTAACGGTTTCGAAGTGACTTCCTACATCGGTGGTGAAGGTCACAACCTGCAGGAGCACTCCGTGATCCTGATCCGTGGCGGTCGTGTTAAAGACCTCCCGGGTGTTCGTTACCACACCGTACGTGGTGCGCTTGACTGCTCCGGCGTTAAAGACCGTAAGCAGGCTCGTTCCAAGTATGGCGTGAAGCGTCCTAAGGCTTAA", - "dna_sequence_length": 375, - "functions": [ - "30S ribosomal subunit protein S12" - ], - "id": "CDS_3280", - "location": [ - [ - "NC_000913", - 3474552, - "-", - 375 - ] - ], - "md5": "2aa2ce4796cec2aed2290a51ccd84e07", - "parent_gene": "", - "protein_md5": "29495e0d2573e3eb61572cc610d4e48b", - "protein_translation": "MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA", - "protein_translation_length": 124, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3305" - ], - [ - "gene_synonym", - "EcoGene:EG12896" - ], - [ - "gene_synonym", - "b3343" - ], - [ - "gene_synonym", - "GI:16131222" - ], - [ - "gene_synonym", - "yheL" - ], - [ - "gene_synonym", - "ECK3330" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45530" - ], - [ - "gene_synonym", - "GeneID:947844" - ], - [ - "gene_synonym", - "ASAP:ABE-0010922" - ], - [ - "gene_synonym", - "tusB" - ], - [ - "gene_synonym", - "NP_417802.1" - ] - ], - "dna_sequence": "ATGCTGCACACATTACATCGCTCACCCTGGCTGACGGATTTTGCTGCGCTGCTGCGTCTGCTCAGTGAAGGAGACGAACTGCTATTATTGCAAGATGGCGTAACTGCCGCAGTTGACGGTAACCGCTACCTTGAAAGTCTGCGTAATGCCCCCATTAAGGTCTATGCCCTGAACGAAGACCTTATTGCCCGCGGTTTGACTGGTCAAATTTCGAACGACATCATTCTCATTGACTATACTGATTTCGTCAGACTTACGGTTAAGCACCCCAGCCAGATGGCCTGGTGA", - "dna_sequence_length": 288, - "functions": [ - "mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein" - ], - "id": "CDS_3281", - "location": [ - [ - "NC_000913", - 3474965, - "-", - 288 - ] - ], - "md5": "3cfbf995b4538e7192244868811243a3", - "parent_gene": "", - "protein_md5": "8d6026b6d86adee3567a335247e6539d", - "protein_translation": "MLHTLHRSPWLTDFAALLRLLSEGDELLLLQDGVTAAVDGNRYLESLRNAPIKVYALNEDLIARGLTGQISNDIILIDYTDFVRLTVKHPSQMAW", - "protein_translation_length": 95, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3344" - ], - [ - "gene_synonym", - "EcoGene:EG12897" - ], - [ - "gene_synonym", - "JW3306" - ], - [ - "gene_synonym", - "GI:16131223" - ], - [ - "gene_synonym", - "yheM" - ], - [ - "gene_synonym", - "ECK3331" - ], - [ - "gene_synonym", - "GeneID:947853" - ], - [ - "gene_synonym", - "NP_417803.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0010928" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45531" - ], - [ - "gene_synonym", - "tusC" - ] - ], - "dna_sequence": "ATGAAACGAATTGCGTTTGTTTTTTCTACTGCACCTCATGGTACAGCCGCAGGCCGGGAAGGTTTAGATGCTTTACTGGCAACTTCCGCATTAACTGACGATCTGGCTGTCTTCTTTATAGCTGATGGCGTTTTTCAGCTGCTGCCAGGACAAAAGCCCGATGCAGTGCTGGCGCGTGATTACATTGCCACTTTTAAATTGTTGGGTCTGTACGACATTGAACAGTGCTGGGTTTGTGCGGCTTCACTGCGCGAACGCGGGTTAGATCCGCAGACACCCTTTGTTGTCGAAGCCACGCCGCTCGAAGCAGATGCCTTACGCCGCGAACTCGCCAACTACGATGTTATTTTGAGGTTTTGA", - "dna_sequence_length": 360, - "functions": [ - "mnm(5)-s(2)U34-tRNA synthesis 2-thiolation protein" - ], - "id": "CDS_3282", - "location": [ - [ - "NC_000913", - 3475332, - "-", - 360 - ] - ], - "md5": "eac6e9c813a3508329d2e5db80208a57", - "parent_gene": "", - "protein_md5": "b9e7f5387777af7bb242027636c4dd41", - "protein_translation": "MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVFQLLPGQKPDAVLARDYIATFKLLGLYDIEQCWVCAASLRERGLDPQTPFVVEATPLEADALRRELANYDVILRF", - "protein_translation_length": 119, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3345" - ], - [ - "gene_synonym", - "JW3307" - ], - [ - "gene_synonym", - "NP_417804.1" - ], - [ - "gene_synonym", - "EcoGene:EG12898" - ], - [ - "gene_synonym", - "GeneID:947852" - ], - [ - "gene_synonym", - "ECK3332" - ], - [ - "gene_synonym", - "yheN" - ], - [ - "gene_synonym", - "GI:16131224" - ], - [ - "gene_synonym", - "tusD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45532" - ], - [ - "gene_synonym", - "ASAP:ABE-0010933" - ] - ], - "dna_sequence": "ATGCGTTTTGCCATCGTGGTGACCGGGCCAGCATACGGTACGCAACAGGCGAGTAGTGCTTTTCAGTTTGCGCAGGCGCTGATAGCAGATGGCCATGAGTTAAGCAGCGTCTTTTTCTATCGGGAAGGGGTCTATAACGCTAACCAATTGACCTCTCCGGCAAGTGACGAATTTGACCTCGTACGGGCCTGGCAACAACTGAATGCGCAACATGGTGTGGCGCTGAATATCTGCGTAGCGGCAGCATTACGCCGTGGCGTTGTTGATGAAACGGAGGCCGGAAGACTGGGGCTGGCTTCGTCAAACCTTCAGCAGGGATTTACCTTAAGCGGACTTGGGGCGCTGGCGGAAGCCTCGCTGACCTGTGACAGGGTGGTACAGTTCTGA", - "dna_sequence_length": 387, - "functions": [ - "sulfurtransferase for 2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis" - ], - "id": "CDS_3283", - "location": [ - [ - "NC_000913", - 3475718, - "-", - 387 - ] - ], - "md5": "f35d205b78cf12ff6aba1ec2f0a7366a", - "parent_gene": "", - "protein_md5": "832ff651a910cda1590a0fc26ef4aba5", - "protein_translation": "MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVYNANQLTSPASDEFDLVRAWQQLNAQHGVALNICVAAALRRGVVDETEAGRLGLASSNLQQGFTLSGLGALAEASLTCDRVVQF", - "protein_translation_length": 128, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5703" - ], - [ - "gene_synonym", - "GeneID:947851" - ], - [ - "gene_synonym", - "b3346" - ], - [ - "gene_synonym", - "GI:90111573" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64624" - ], - [ - "gene_synonym", - "NP_417805.4" - ], - [ - "gene_synonym", - "ECK3333" - ], - [ - "gene_synonym", - "yheO" - ], - [ - "gene_synonym", - "EcoGene:EG12899" - ], - [ - "gene_synonym", - "ASAP:ABE-0010936" - ] - ], - "dna_sequence": "ATGTCCAGGTCGCTTTTAACCAACGAAACCAGTGAGTTGGATTTACTGGATCAACGTCCTTTCGACCAGACCGATTTTGATATTCTGAAATCCTACGAAGCGGTGGTGGACGGGTTAGCGATGCTTATTGGCTCCCACTGTGAAATCGTTTTGCACTCTTTGCAGGATCTAAAATGTTCAGCCATTCGCATTGCTAACGGTGAACATACAGGCCGGAAGATTGGTTCGCCAATTACTGACCTGGCGCTACGTATGCTGCACGATATGACGGGAGCGGATAGCAGCGTTTCTAAATGCTACTTTACTCGCGCCAAAAGCGGCGTATTAATGAAGTCCCTGACTATCGCGATTCGTAACCGCGAACAGCGTGTAATTGGTCTGCTGTGCATCAATATGAATCTTGATGTTCCCTTCTCGCAGATTATGAGCACCTTTGTGCCGCCAGAAACCCCGGATGTCGGTTCAAGCGTCAACTTTGCCTCTTCTGTTGAAGATCTGGTTACCCAAACGCTGGAGTTCACCATCGAAGAAGTGAATGCCGATCGCAATGTTTCTAATAACGCCAAAAATCGTCAGATCGTGCTGAATCTCTACGAGAAAGGGATCTTCGATATTAAAGATGCGATCAACCAGGTTGCTGACCGCCTGAACATCTCCAAACACACTGTCTATCTCTACATCCGCCAGTTCAAGAGCGGTGATTTCCAGGGGCAAGATAAGTAA", - "dna_sequence_length": 723, - "functions": [ - "putative PAS domain-containing DNA-binding transcriptional regulator" - ], - "id": "CDS_3284", - "location": [ - [ - "NC_000913", - 3476440, - "-", - 723 - ] - ], - "md5": "2fc905f490aa545561a6ea2e74b3fad2", - "parent_gene": "", - "protein_md5": "ef1fc8010739057d521c2c08f6fa32f9", - "protein_translation": "MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIGSHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFTRAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFASSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKSGDFQGQDK", - "protein_translation_length": 240, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3347" - ], - [ - "gene_synonym", - "EcoGene:EG12900" - ], - [ - "gene_synonym", - "JW3309" - ], - [ - "gene_synonym", - "ECK3334" - ], - [ - "gene_synonym", - "yzzS" - ], - [ - "gene_synonym", - "GI:16131226" - ], - [ - "gene_synonym", - "GeneID:947850" - ], - [ - "gene_synonym", - "fkpA" - ], - [ - "gene_synonym", - "ASAP:ABE-0010938" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45523" - ], - [ - "gene_synonym", - "NP_417806.1" - ] - ], - "dna_sequence": "ATGAAATCACTGTTTAAAGTAACGCTGCTGGCGACCACAATGGCCGTTGCCCTGCATGCACCAATCACTTTTGCTGCTGAAGCTGCAAAACCTGCTACAGCTGCTGACAGCAAAGCAGCGTTCAAAAATGACGATCAGAAATCAGCTTATGCACTGGGTGCCTCGCTGGGTCGTTACATGGAAAACTCTCTAAAAGAACAAGAAAAACTGGGCATCAAACTGGATAAAGATCAGCTGATCGCTGGTGTTCAGGATGCATTTGCTGATAAGAGCAAACTCTCCGACCAAGAGATCGAACAGACTCTACAAGCATTCGAAGCTCGCGTGAAGTCTTCTGCTCAGGCGAAGATGGAAAAAGACGCGGCTGATAACGAAGCAAAAGGTAAAGAGTACCGCGAGAAATTTGCCAAAGAGAAAGGTGTGAAAACCTCTTCAACTGGTCTGGTTTATCAGGTAGTAGAAGCCGGTAAAGGCGAAGCACCGAAAGACAGCGATACTGTTGTAGTGAACTACAAAGGTACGCTGATCGACGGTAAAGAGTTCGACAACTCTTACACCCGTGGTGAACCGCTTTCTTTCCGTCTGGACGGTGTTATCCCGGGTTGGACAGAAGGTCTGAAGAACATCAAGAAAGGCGGTAAGATCAAACTGGTTATTCCACCAGAACTGGCTTACGGCAAAGCGGGTGTTCCGGGGATCCCACCGAATTCTACCCTGGTGTTTGACGTAGAGCTGCTGGATGTGAAACCAGCGCCGAAGGCTGATGCAAAGCCGGAAGCTGATGCGAAAGCCGCAGATTCTGCTAAAAAATAA", - "dna_sequence_length": 813, - "functions": [ - "FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)" - ], - "id": "CDS_3285", - "location": [ - [ - "NC_000913", - 3477419, - "-", - 813 - ] - ], - "md5": "d759cf9123b3a0b8f6b7495860fc5601", - "parent_gene": "", - "protein_md5": "806279ae507c35c6fffa477f138c7919", - "protein_translation": "MKSLFKVTLLATTMAVALHAPITFAAEAAKPATAADSKAAFKNDDQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTLQAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAPKADAKPEADAKAADSAKK", - "protein_translation_length": 270, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947849" - ], - [ - "gene_synonym", - "JW3310" - ], - [ - "gene_synonym", - "ASAP:ABE-0010944" - ], - [ - "gene_synonym", - "ECK3335" - ], - [ - "gene_synonym", - "GI:16131227" - ], - [ - "gene_synonym", - "b3348" - ], - [ - "gene_synonym", - "slyX" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8R4" - ], - [ - "gene_synonym", - "EcoGene:EG11664" - ], - [ - "gene_synonym", - "NP_417807.1" - ] - ], - "dna_sequence": "ATGCAGGATTTATCATTGGAAGCACGCCTGGCAGAGCTGGAGAGCCGACTGGCTTTTCAGGAAATCACCATTGAAGAACTGAACGTCACGGTGACCGCTCATGAAATGGAGATGGCGAAACTGCGCGATCATCTGCGTCTGCTGACCGAGAAGTTAAAAGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGA", - "dna_sequence_length": 219, - "functions": [ - "phi X174 lysis protein" - ], - "id": "CDS_3286", - "location": [ - [ - "NC_000913", - 3477640, - "+", - 219 - ] - ], - "md5": "fc566ba541025f2ce5f086d0e80e89e1", - "parent_gene": "", - "protein_md5": "00bc8ba7a63c1b8b0b2f031a6c496b49", - "protein_translation": "MQDLSLEARLAELESRLAFQEITIEELNVTVTAHEMEMAKLRDHLRLLTEKLKASQPSNIASQAEETPPPHY", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131228" - ], - [ - "gene_synonym", - "JW3311" - ], - [ - "gene_synonym", - "ECK3336" - ], - [ - "gene_synonym", - "GeneID:947859" - ], - [ - "gene_synonym", - "b3349" - ], - [ - "gene_synonym", - "ASAP:ABE-0010946" - ], - [ - "gene_synonym", - "slyD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9K9" - ], - [ - "gene_synonym", - "EcoGene:EG11663" - ], - [ - "gene_synonym", - "NP_417808.1" - ] - ], - "dna_sequence": "ATGAAAGTAGCAAAAGACCTGGTGGTCAGCCTGGCCTATCAGGTACGTACAGAAGACGGTGTGTTGGTTGATGAGTCTCCGGTGAGTGCGCCGCTGGACTACCTGCATGGTCACGGTTCCCTGATCTCTGGCCTGGAAACGGCGCTGGAAGGTCATGAAGTTGGCGACAAATTTGATGTCGCTGTTGGCGCGAACGACGCTTACGGTCAGTACGACGAAAACCTGGTGCAACGTGTTCCTAAAGACGTATTTATGGGCGTTGATGAACTGCAGGTAGGTATGCGTTTCCTGGCTGAAACCGACCAGGGTCCGGTACCGGTTGAAATCACTGCGGTTGAAGACGATCACGTCGTGGTTGATGGTAACCACATGCTGGCCGGTCAGAACCTGAAATTCAACGTTGAAGTTGTGGCGATTCGCGAAGCGACTGAAGAAGAACTGGCTCATGGTCACGTTCACGGCGCGCACGATCACCACCACGATCACGACCACGACGGTTGCTGCGGCGGTCATGGCCACGATCACGGTCATGAACACGGTGGCGAAGGCTGCTGTGGCGGTAAAGGCAACGGCGGTTGCGGTTGCCACTAA", - "dna_sequence_length": 591, - "functions": [ - "FKBP-type peptidyl prolyl cis-trans isomerase (rotamase)" - ], - "id": "CDS_3287", - "location": [ - [ - "NC_000913", - 3478497, - "-", - 591 - ] - ], - "md5": "fe7006a5cc0faf16547666459c61223e", - "parent_gene": "", - "protein_md5": "d846b3446c74769630da84764ee91886", - "protein_translation": "MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHHDHDHDGCCGGHGHDHGHEHGGEGCCGGKGNGGCGCH", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4551" - ], - [ - "gene_synonym", - "GeneID:1450290" - ], - [ - "gene_synonym", - "JW3312" - ], - [ - "gene_synonym", - "ASAP:ABE-0285072" - ], - [ - "gene_synonym", - "ECK3337" - ], - [ - "gene_synonym", - "EcoGene:EG14364" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADW8" - ], - [ - "gene_synonym", - "GI:94541125" - ], - [ - "gene_synonym", - "yheV" - ], - [ - "gene_synonym", - "YP_588468.1" - ] - ], - "dna_sequence": "ATGGCAATCCGAAAACGTTTTATTGCGGGCGCAAAATGCCCGGCCTGTCAGGCGCAGGATTCAATGGCGATGTGGCGCGAAAATAATATTGATATTGTTGAATGTGTTAAGTGCGGACATCAGATGCGAGAAGCAGACAAAGAAGCCCGCGATCACGTTCGCAAAGATGAGCAAGTGATCGGGATTTTTCATCCGGACTAG", - "dna_sequence_length": 201, - "functions": [ - "DUF2387 family putative metal-binding protein" - ], - "id": "CDS_3288", - "location": [ - [ - "NC_000913", - 3478792, - "-", - 201 - ] - ], - "md5": "815126b1228be48692d6f9228bb19c9d", - "parent_gene": "", - "protein_md5": "04826ee02de2e8ea82315341ca3f5b4e", - "protein_translation": "MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMREADKEARDHVRKDEQVIGIFHPD", - "protein_translation_length": 66, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0010949" - ], - [ - "gene_synonym", - "GI:16131229" - ], - [ - "gene_synonym", - "trkB" - ], - [ - "gene_synonym", - "b3350" - ], - [ - "gene_synonym", - "ECK3338" - ], - [ - "gene_synonym", - "NP_417809.1" - ], - [ - "gene_synonym", - "EcoGene:EG20110" - ], - [ - "gene_synonym", - "GeneID:947858" - ], - [ - "gene_synonym", - "kefB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45522" - ], - [ - "gene_synonym", - "JW3313" - ] - ], - "dna_sequence": "ATGGAAGGTTCCGATTTTTTACTCGCAGGAGTGCTGTTTCTCTTCGCGGCGGTGGCTGCGGTGCCGCTGGCATCGCGGCTGGGTATTGGCGCTGTGTTGGGATATTTGCTGGCAGGGATTGCAATTGGCCCGTGGGGGCTGGGGTTTATTAGCGACGTCGATGAGATCCTCCACTTTTCGGAACTCGGCGTGGTATTCCTGATGTTTATCATCGGCCTTGAGTTGAATCCCTCCAAACTTTGGCAACTGCGGCGTTCGATTTTTGGCGTAGGCGCGGCACAGGTGCTGTTAAGCGCGGCGTTGCTGGCGGGATTATTGATGCTGACGGATTTCGCCTGGCAGGCGGCGGTGGTCGGTGGCATTGGCCTTGCGATGTCTTCAACTGCAATGGCGTTGCAATTGATGCGTGAGAAAGGGATGAATCGCAGCGAATCCGGCCAGCTCGGGTTTTCGGTTCTGCTGTTTCAGGATCTGGCAGTAATCCCAGCACTGGCGTTAGTGCCGTTGTTGGCGGGGTCGGCAGACGAACATTTCGACTGGATGAAGGTCGGCATGAAGGTGCTGGCGTTTGTCGGCATGCTGATTGGTGGGCGCTATTTACTGCGTCCGGTATTCCGCTTTATTGCAGCTTCTGGCGTGCGGGAAGTGTTCACCGCCGCGACGCTGCTGCTGGTGTTGGGTTCCGCATTGTTTATGGATGCGCTGGGGCTGTCGATGGCGCTCGGTACATTTATTGCGGGCGTGCTGCTGGCGGAAAGTGAATATCGCCATGAACTGGAAACGGCTATCGATCCCTTCAAAGGCTTGCTGCTCGGTTTGTTCTTTATCTCTGTCGGCATGTCACTCAACCTCGGGGTGCTTTATACCCATCTGTTGTGGGTAGTGATAAGCGTGGTTGTGCTGGTGGCGGTGAAAATTCTCGTGCTGTATCTGCTGGCGCGATTGTATGGCGTGCGTAGCTCAGAGCGGATGCAGTTTGCTGGCGTGTTGAGTCAGGGTGGTGAGTTTGCCTTTGTCCTCTTTTCTACCGCTTCTTCACAACGCTTATTCCAGGGCGACCAGATGGCGTTGTTGCTGGTGACGGTGACGCTTTCCATGATGACCACGCCGTTGCTGATGAAGCTGGTGGATAAATGGCTATCCCGCCAGTTTAACGGACCGGAAGAAGAAGACGAAAAACCGTGGGTCAACGATGATAAACCCCAGGTCATTGTCGTGGGCTTCGGGCGTTTTGGTCAGGTGATTGGTCGTTTGCTGATGGCAAATAAAATGCGCATTACCGTGCTGGAGCGGGATATCAGCGCCGTTAACCTGATGCGTAAATACGGCTACAAAGTTTATTACGGCGACGCCACGCAGGTCGATCTTTTACGTTCTGCGGGTGCAGAGGCCGCTGAGTCTATCGTCATTACCTGTAACGAGCCGGAAGACACCATGAAGCTGGTGGAAATATGCCAACAGCACTTTCCGCATTTGCATATTCTTGCGCGAGCGCGCGGACGTGTGGAAGCGCATGAGTTATTACAGGCAGGGGTGACGCAGTTTTCCCGTGAAACATTCTCCAGTGCGTTAGAGCTGGGGCGCAAGACGCTGGTCACGCTTGGCATGCATCCGCATCAGGCACAGCGAGCGCAACTGCATTTTCGCCGCCTGGATATGCGGATGCTGCGAGAGCTCATCCCAATGCATGCCGATACCGTACAAATTTCTCGCGCCAGGGAAGCCCGACGCGAACTGGAAGAGATTTTCCAGCGTGAAATGCAACAAGAACGACGCCAGCTGGACGGCTGGGATGAATTTGAGTAG", - "dna_sequence_length": 1806, - "functions": [ - "potassium:proton antiporter" - ], - "id": "CDS_3289", - "location": [ - [ - "NC_000913", - 3480607, - "-", - 1806 - ] - ], - "md5": "1f671571864e11a93fe1be8b92023713", - "parent_gene": "", - "protein_md5": "32748b567785b5ea6d93880ce1dcba04", - "protein_translation": "MEGSDFLLAGVLFLFAAVAAVPLASRLGIGAVLGYLLAGIAIGPWGLGFISDVDEILHFSELGVVFLMFIIGLELNPSKLWQLRRSIFGVGAAQVLLSAALLAGLLMLTDFAWQAAVVGGIGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAVIPALALVPLLAGSADEHFDWMKVGMKVLAFVGMLIGGRYLLRPVFRFIAASGVREVFTAATLLLVLGSALFMDALGLSMALGTFIAGVLLAESEYRHELETAIDPFKGLLLGLFFISVGMSLNLGVLYTHLLWVVISVVVLVAVKILVLYLLARLYGVRSSERMQFAGVLSQGGEFAFVLFSTASSQRLFQGDQMALLLVTVTLSMMTTPLLMKLVDKWLSRQFNGPEEEDEKPWVNDDKPQVIVVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQVDLLRSAGAEAAESIVITCNEPEDTMKLVEICQQHFPHLHILARARGRVEAHELLQAGVTQFSRETFSSALELGRKTLVTLGMHPHQAQRAQLHFRRLDMRMLRELIPMHADTVQISRAREARRELEEIFQREMQQERRQLDGWDEFE", - "protein_translation_length": 601, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A756" - ], - [ - "gene_synonym", - "EcoGene:EG12902" - ], - [ - "gene_synonym", - "JW3314" - ], - [ - "gene_synonym", - "ECK3339" - ], - [ - "gene_synonym", - "b3351" - ], - [ - "gene_synonym", - "GI:16131230" - ], - [ - "gene_synonym", - "GeneID:947857" - ], - [ - "gene_synonym", - "ASAP:ABE-0010951" - ], - [ - "gene_synonym", - "yheR" - ], - [ - "gene_synonym", - "NP_417810.1" - ], - [ - "gene_synonym", - "kefG" - ] - ], - "dna_sequence": "ATGATGTCTCAGCCAGCGAAAGTTTTGCTGCTGTATGCCCATCCGGAATCTCAGGACTCGGTGGCAAACCGGGTACTGCTTAAACCGGCCACGCAGCTCAGCAATGTTACCGTGCACGACCTTTACGCGCACTATCCCGATTTTTTTATTGATATCCCCCGTGAGCAGGCATTACTGCGCGAGCACGAGGTGATTGTCTTTCAGCATCCTCTTTATACCTATAGCTGCCCGGCGCTACTGAAAGAGTGGCTGGACCGGGTATTAAGTCGTGGTTTTGCCAGCGGGCCGGGAGGAAACCAACTGGCGGGAAAGTACTGGCGTAGCGTGATTACCACCGGCGAGCCGGAAAGTGCTTACCGTTATGACGCGCTGAATCGCTACCCGATGAGCGATGTGCTGCGCCCCTTTGAACTGGCGGCGGGCATGTGCCGGATGCATTGGTTAAGTCCCATCATTATTTACTGGGCGAGACGGCAAAGCGCACAGGAGCTGGCGAGCCACGCCAGAGCCTACGGTGACTGGCTGGCAAATCCGCTGTCTCCAGGAGGCCGCTGA", - "dna_sequence_length": 555, - "functions": [ - "potassium-efflux system ancillary protein for KefB, glutathione-regulated" - ], - "id": "CDS_3290", - "location": [ - [ - "NC_000913", - 3481161, - "-", - 555 - ] - ], - "md5": "65989c0e39d9ca269910540b8c3b0ea7", - "parent_gene": "", - "protein_md5": "62ab7da6ee5eada79ce79cadab54074f", - "protein_translation": "MMSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHYPDFFIDIPREQALLREHEVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAGKYWRSVITTGEPESAYRYDALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSAQELASHARAYGDWLANPLSPGGR", - "protein_translation_length": 184, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63389" - ], - [ - "gene_synonym", - "EcoGene:EG12903" - ], - [ - "gene_synonym", - "JW3315" - ], - [ - "gene_synonym", - "b3352" - ], - [ - "gene_synonym", - "GeneID:947856" - ], - [ - "gene_synonym", - "GI:16131231" - ], - [ - "gene_synonym", - "NP_417811.1" - ], - [ - "gene_synonym", - "yheS" - ], - [ - "gene_synonym", - "ASAP:ABE-0010955" - ], - [ - "gene_synonym", - "ECK3340" - ] - ], - "dna_sequence": "ATGATTGTTTTCTCCTCGTTACAAATTCGTCGCGGCGTGCGCGTCCTGCTGGATAATGCCACCGCCACCATCAACCCTGGGCAGAAAGTCGGCCTGGTGGGTAAAAACGGCTGTGGTAAATCTACCCTGCTGGCATTGCTGAAAAATGAAATCAGCGCCGACGGCGGCAGCTACACCTTTCCGGGAAGCTGGCAACTGGCGTGGGTGAATCAGGAAACGCCGGCGTTACCGCAAGCGGCGCTGGAATATGTCATTGACGGCGACCGTGAATATCGTCAACTAGAAGCGCAGCTACACGACGCCAACGAACGTAACGACGGGCACGCCATTGCGACCATTCATGGCAAGCTGGATGCTATTGACGCATGGAGTATTCGCTCCCGTGCTGCCAGCCTGCTGCACGGCCTCGGTTTCAGCAATGAACAACTGGAGCGCCCGGTAAGTGATTTTTCCGGGGGCTGGCGTATGCGTCTTAACCTTGCCCAGGCGCTGATTTGCCGTTCAGACTTGCTGCTGCTCGACGAACCGACTAACCACCTCGATCTCGATGCCGTTATCTGGCTGGAAAAATGGCTGAAGAGCTATCAGGGCACGCTGATCCTGATCTCTCACGACCGCGACTTCCTCGATCCGATCGTCGATAAAATTATTCATATCGAACAACAAAGCATGTTCGAGTACACCGGCAACTACAGTTCGTTTGAAGTACAGCGCGCCACCCGTCTGGCGCAGCAACAAGCGATGTACGAAAGCCAGCAGGAACGCGTAGCGCATCTGCAAAGTTATATCGACCGTTTCCGTGCCAAAGCCACCAAAGCGAAGCAGGCCCAGAGCCGCATTAAGATGCTCGAGCGTATGGAGCTAATTGCCCCCGCGCACGTCGACAACCCGTTCCGCTTTAGCTTCCGCGCGCCGGAAAGCCTGCCAAATCCGTTACTGAAGATGGAAAAAGTCAGCGCGGGCTATGGCGATCGCATTATTCTCGACTCGATTAAACTGAACCTGGTGCCCGGCTCGCGTATTGGTCTGTTAGGCCGCAATGGCGCGGGTAAATCGACATTAATCAAACTGTTAGCCGGTGAACTTGCGCCAGTCAGCGGTGAAATTGGTCTGGCGAAAGGGATCAAACTCGGCTACTTCGCCCAGCATCAACTTGAATACCTGCGCGCCGACGAATCACCTATTCAACATCTGGCACGTTTAGCGCCGCAGGAGCTGGAACAAAAACTGCGTGACTACCTCGGCGGCTTTGGTTTCCAGGGCGATAAAGTAACCGAAGAAACGCGCCGCTTCTCCGGTGGGGAAAAAGCCCGCCTGGTGCTGGCATTAATTGTCTGGCAGCGGCCGAATCTGCTGCTGCTCGACGAACCGACTAACCACCTTGACCTCGACATGCGTCAGGCACTCACCGAAGCATTAATCGAGTTTGAAGGCGCGCTGGTTGTCGTTTCGCACGACCGTCATTTGCTGCGTTCCACCACTGACGATCTCTACCTGGTTCACGATCGTAAAGTCGAACCGTTCGACGGCGATCTGGAAGATTATCAACAGTGGTTGAGCGACGTACAAAAGCAGGAAAACCAGACCGACGAAGCGCCAAAAGAGAATGCGAACAGCGCCCAGGCACGTAAAGATCAGAAGCGTCGGGAAGCTGAGCTGCGTGCGCAAACCCAGCCACTGCGTAAAGAGATTGCCCGTCTGGAAAAAGAGATGGAGAAGCTGAACGCGCAACTGGCGCAGGCGGAAGAGAAACTCGGCGACAGCGAACTGTATGACCAGAGCCGTAAAGCGGAGTTGACCGCCTGCCTGCAACAGCAAGCCAGCGCCAAATCCGGCCTGGAAGAGTGCGAAATGGCATGGCTGGAAGCCCAGGAGCAGCTTGAGCAGATGCTGCTGGAAGGCCAAAGCAACTGA", - "dna_sequence_length": 1914, - "functions": [ - "ABC-F family protein predicted regulatory ATPase" - ], - "id": "CDS_3291", - "location": [ - [ - "NC_000913", - 3481289, - "+", - 1914 - ] - ], - "md5": "18f8300c6208c9bc20cb25cfb0a36b56", - "parent_gene": "", - "protein_md5": "ba5c462cef0b296fac2ec3a842557184", - "protein_translation": "MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGSWQLAWVNQETPALPQAALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSMFEYTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNPLLKMEKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSHDRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPLRKEIARLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQEQLEQMLLEGQSN", - "protein_translation_length": 637, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3316" - ], - [ - "gene_synonym", - "NP_417812.1" - ], - [ - "gene_synonym", - "b3353" - ], - [ - "gene_synonym", - "EcoGene:EG12904" - ], - [ - "gene_synonym", - "GI:16131232" - ], - [ - "gene_synonym", - "GeneID:947855" - ], - [ - "gene_synonym", - "ASAP:ABE-0010957" - ], - [ - "gene_synonym", - "yheT" - ], - [ - "gene_synonym", - "ECK3341" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45524" - ] - ], - "dna_sequence": "ATGGCGCAGATAACGACGACCGATGCCAATGAATTCAGCAGCAGTGCTGAATTCATCCCCATGCGCGGCTTTAGCAATTGTCATCTGCAAACCATGCTGCCGCGTCTGTTTCGTCGTCAGGTGAAATTCACCCCGTACTGGCAGCGGCTGGAGTTGCCCGACGGCGATTTTGTCGATCTTGCGTGGAGTGAAAACCCTGCACAGGCGCAACATAAACCTCGTCTGGTGGTGTTTCACGGGCTGGAAGGCAGTCTCAACAGCCCTTACGCCCACGGTCTGGTTGAGGCGGCGCAAAAGCGCGGCTGGCTGGGCGTGGTGATGCATTTTCGCGGATGCAGCGGTGAACCAAACCGTATGCACCGCATTTACCATTCGGGCGAAACCGAAGACGCCAGTTGGTTTTTACGCTGGCTGCAACGCGAATTTGGTCATGCGCCAACGGCTGCCGTCGGCTATTCGCTCGGCGGTAATATGCTGGCCTGTTTGCTGGCAAAGGAAGGCAATGATCTCCCGGTTGATGCGGCGGTGATTGTCTCTGCGCCGTTTATGCTGGAAGCCTGTAGCTATCATATGGAAAAGGGCTTTTCCCGCGTTTATCAGCGTTACTTGCTGAACCTGTTAAAAGCCAATGCCGCGCGCAAGCTGGCAGCCTACCCCGGAACGCTGCCGATTAATCTCGCGCAGTTAAAATCGGTACGTCGCATCCGTGAATTTGACGATCTCATCACCGCCAGAATTCACGGCTACGCCGACGCTATCGACTATTATCGTCAGTGTAGCGCCATGCCGATGCTGAACCGGATCGCCAAACCGACGCTGATTATTCACGCCAAAGACGATCCGTTTATGGATCATCAGGTGATCCCGAAACCGGAAAGTCTCCCCCCGCAGGTGGAGTATCAACTGACTGAACATGGCGGTCATGTTGGCTTTATTGGCGGTACATTACTTCATCCGCAAATGTGGCTGGAGTCACGCATTCCTGACTGGTTAACAACGTATCTGGAGGCGAAATCATGTTGA", - "dna_sequence_length": 1023, - "functions": [ - "UPF0017 family putative hydrolase" - ], - "id": "CDS_3292", - "location": [ - [ - "NC_000913", - 3483202, - "+", - 1023 - ] - ], - "md5": "747fb18231d2b31a2e17f9f326da6d8d", - "parent_gene": "", - "protein_md5": "4e07c56169587996d0a84a2c24141d5d", - "protein_translation": "MAQITTTDANEFSSSAEFIPMRGFSNCHLQTMLPRLFRRQVKFTPYWQRLELPDGDFVDLAWSENPAQAQHKPRLVVFHGLEGSLNSPYAHGLVEAAQKRGWLGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLACLLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIHAKDDPFMDHQVIPKPESLPPQVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTYLEAKSC", - "protein_translation_length": 340, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3317" - ], - [ - "gene_synonym", - "b3354" - ], - [ - "gene_synonym", - "EcoGene:EG12905" - ], - [ - "gene_synonym", - "NP_417813.1" - ], - [ - "gene_synonym", - "GeneID:947863" - ], - [ - "gene_synonym", - "GI:16131233" - ], - [ - "gene_synonym", - "ASAP:ABE-0010959" - ], - [ - "gene_synonym", - "yheU" - ], - [ - "gene_synonym", - "ECK3342" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67624" - ] - ], - "dna_sequence": "ATGTTGATTCCGTGGCAAGACCTCTCCCCCGAAACGCTGGAAAATTTAATTGAAAGCTTTGTGTTACGTGAAGGCACCGATTATGGTGAACATGAGCGTACACTTGAACAGAAAGTCGCCGACGTCAAACGCCAGCTACAGTGCGGAGAAGCGGTGCTGGTATGGTCGGAGCTGCACGAAACGGTCAATATTATGCCGCGCAGTCAGTTTCGCGAATAA", - "dna_sequence_length": 219, - "functions": [ - "UPF0270 family protein" - ], - "id": "CDS_3293", - "location": [ - [ - "NC_000913", - 3484218, - "+", - 219 - ] - ], - "md5": "9991114176eb0b596f658a38208156ca", - "parent_gene": "", - "protein_md5": "7033524c6835105f1e9a884500a6b723", - "protein_translation": "MLIPWQDLSPETLENLIESFVLREGTDYGEHERTLEQKVADVKRQLQCGEAVLVWSELHETVNIMPRSQFRE", - "protein_translation_length": 72, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "prkB" - ], - [ - "gene_synonym", - "b3355" - ], - [ - "gene_synonym", - "ASAP:ABE-0010962" - ], - [ - "gene_synonym", - "NP_417814.1" - ], - [ - "gene_synonym", - "GI:16131234" - ], - [ - "gene_synonym", - "JW3318" - ], - [ - "gene_synonym", - "yhfF" - ], - [ - "gene_synonym", - "EcoGene:EG12365" - ], - [ - "gene_synonym", - "GeneID:947862" - ], - [ - "gene_synonym", - "ECK3343" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEX5" - ], - [ - "gene_synonym", - "prk?" - ] - ], - "dna_sequence": "ATGTCTGCCAAACATCCGGTCATTGCGGTAACAGGATCCAGCGGCGCGGGGACCACCACCACCAGCCTCGCGTTTCGTAAAATATTCGCGCAGTTAAATCTGCATGCAGCTGAGGTGGAAGGCGACAGTTTTCACCGTTACACCCGCCCGGAAATGGACATGGCGATCCGCAAAGCGCGCGACGCCGGGCGGCATATCAGCTACTTCGGCCCCGAGGCTAACGACTTCGGCCTGCTGGAACAAACCTTCATTGAATACGGTCAGAGCGGCAAAGGGAAATCTCGCAAATATCTGCATACCTACGACGAAGCCGTACCGTGGAATCAGGTACCGGGGACATTCACCCCCTGGCAACCTTTACCGGAACCCACTGATGTACTGTTTTATGAAGGTTTACACGGCGGCGTAGTCACGCCACAGCATAACGTTGCGCAGCATGTGGACTTACTGGTCGGCGTGGTGCCTATCGTTAACCTTGAGTGGATTCAAAAACTGATCCGCGACACCAGCGAGCGCGGGCACTCACGAGAAGCAGTGATGGACTCAGTAGTGCGTTCAATGGAAGACTATATCAACTACATCACACCGCAGTTTTCCCGCACCCATCTTAACTTCCAGCGCGTTCCCACCGTCGACACTTCAAACCCGTTCGCGGCAAAAGGTATCCCGTCGCTCGATGAAAGCTTTGTGGTGATCCATTTTCGTAATCTGGAAGGGATCGATTTCCCCTGGCTGCTGGCGATGTTGCAAGGCTCATTCATTTCCCACATCAATACGTTAGTGGTACCGGGCGGCAAAATGGGTCTGGCAATGGAATTAATTATGCTGCCGCTGGTGCAACGATTGATGGAAGGAAAGAAAATCGAGTAA", - "dna_sequence_length": 870, - "functions": [ - "putative phosphoribulokinase" - ], - "id": "CDS_3294", - "location": [ - [ - "NC_000913", - 3484490, - "+", - 870 - ] - ], - "md5": "833f9e8959db6d6609956785b15edbdd", - "parent_gene": "", - "protein_md5": "d96b7e35e3d96f59c5fb9bfa13343bdb", - "protein_translation": "MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSFHRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYDEAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPQHNVAQHVDLLVGVVPIVNLEWIQKLIRDTSERGHSREAVMDSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFAAKGIPSLDESFVVIHFRNLEGIDFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIMLPLVQRLMEGKKIE", - "protein_translation_length": 289, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3356" - ], - [ - "gene_synonym", - "GeneID:947860" - ], - [ - "gene_synonym", - "yhfA" - ], - [ - "gene_synonym", - "ASAP:ABE-0010964" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADX1" - ], - [ - "gene_synonym", - "GI:16131235" - ], - [ - "gene_synonym", - "JW3319" - ], - [ - "gene_synonym", - "EcoGene:EG11182" - ], - [ - "gene_synonym", - "NP_417815.1" - ], - [ - "gene_synonym", - "ECK3344" - ] - ], - "dna_sequence": "ATGCAAGCGCGAGTGAAGTGGGTCGAAGGGTTAACTTTTCTGGGCGAATCCGCCTCTGGTCATCAGATTTTAATGGACGGCAACTCAGGCGATAAAGCACCAAGTCCGATGGAAATGGTGTTGATGGCGGCGGGTGGTTGCAGTGCCATCGATGTGGTTTCGATCCTGCAAAAAGGGCGTCAGGATGTGGTCGATTGTGAAGTAAAATTGACCTCTGAACGCCGCGAAGAGGCACCACGCCTGTTTACGCACATTAATCTGCATTTTATCGTCACCGGTCGCGACCTGAAAGACGCAGCGGTTGCGCGTGCGGTTGATCTCTCTGCCGAGAAATATTGTTCAGTGGCGTTGATGCTGGAAAAAGCGGTGAATATTACTCACTCGTATGAAGTGGTTGCCGCGTGA", - "dna_sequence_length": 405, - "functions": [ - "OsmC family protein" - ], - "id": "CDS_3295", - "location": [ - [ - "NC_000913", - 3485818, - "-", - 405 - ] - ], - "md5": "8dda6a4ba62daa4d08f824aa57f32e54", - "parent_gene": "", - "protein_md5": "6dec421aecff53c08f79dd15432e59cb", - "protein_translation": "MQARVKWVEGLTFLGESASGHQILMDGNSGDKAPSPMEMVLMAAGGCSAIDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA", - "protein_translation_length": 134, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "csm" - ], - [ - "gene_synonym", - "b3357" - ], - [ - "gene_synonym", - "crp" - ], - [ - "gene_synonym", - "JW5702" - ], - [ - "gene_synonym", - "cap" - ], - [ - "gene_synonym", - "GeneID:947867" - ], - [ - "gene_synonym", - "GI:16131236" - ], - [ - "gene_synonym", - "ASAP:ABE-0010970" - ], - [ - "gene_synonym", - "EcoGene:EG10164" - ], - [ - "gene_synonym", - "NP_417816.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACJ8" - ], - [ - "gene_synonym", - "ECK3345" - ] - ], - "dna_sequence": "ATGGTGCTTGGCAAACCGCAAACAGACCCGACTCTCGAATGGTTCTTGTCTCATTGCCACATTCATAAGTACCCATCCAAGAGCACGCTTATTCACCAGGGTGAAAAAGCGGAAACGCTGTACTACATCGTTAAAGGCTCTGTGGCAGTGCTGATCAAAGACGAAGAGGGTAAAGAAATGATCCTCTCCTATCTGAATCAGGGTGATTTTATTGGCGAACTGGGCCTGTTTGAAGAGGGCCAGGAACGTAGCGCATGGGTACGTGCGAAAACCGCCTGTGAAGTGGCTGAAATTTCGTACAAAAAATTTCGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACACGGTAAAACCATCGTCGTTTACGGCACTCGTTAA", - "dna_sequence_length": 633, - "functions": [ - "cAMP-activated global transcription factor, mediator of catabolite repression" - ], - "id": "CDS_3296", - "location": [ - [ - "NC_000913", - 3486120, - "+", - 633 - ] - ], - "md5": "4b0a7b92e9ef21c8818d12acc3644f22", - "parent_gene": "", - "protein_md5": "9a58754a5c561c0784b75360a962f090", - "protein_translation": "MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR", - "protein_translation_length": 210, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yhfK" - ], - [ - "gene_synonym", - "GI:90111574" - ], - [ - "gene_synonym", - "EcoGene:EG12906" - ], - [ - "gene_synonym", - "NP_417817.2" - ], - [ - "gene_synonym", - "JW5701" - ], - [ - "gene_synonym", - "b3358" - ], - [ - "gene_synonym", - "GeneID:947866" - ], - [ - "gene_synonym", - "ASAP:ABE-0010974" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45537" - ], - [ - "gene_synonym", - "ECK3346" - ] - ], - "dna_sequence": "TTGTTTCCCCCGATGTGGCGCAGACTGATTTATCACCCCGATATCAACTATGCACTTCGACAAACGCTGGTGCTATGTTTGCCCGTGGCCGTTGGGTTAATGCTTGGCGAATTACGATTCGGTCTGCTCTTCTCCCTCGTTCCTGCCTGTTGCAATATTGCGGGCCTTGATACGCCTCATAAACGTTTTTTCAAACGCTTAATCATTGGTGCGTCGCTGTTTGCCACCTGTAGCTTGCTGACACAGCTACTACTGGCAAAAGATGTTCCCCTGCCCTTTTTGCTGACCGGATTAACGCTGGTACTTGGCGTCACTGCTGAGCTGGGGCCATTGCACGCAAAATTGCTTCCTGCATCGCTGCTCGCCGCCATTTTTACCCTCAGTTTGGCGGGATACATGCCGGTCTGGGAACCGTTGCTCATCTATGCGTTGGGCACTCTCTGGTACGGATTGTTTAACTGGTTTTGGTTCTGGATCTGGCGCGAACAACCGCTGCGCGAGTCACTAAGTCTGCTGTACCGTGAACTGGCAGATTATTGTGAAGCCAAATACAGCCTGCTTACCCAGCACACCGACCCTGAAAAAGCGCTGCCGCCGCTGCTGGTGCGCCAGCAAAAAGCGGTCGATCTAATTACCCAGTGCTATCAGCAAATGCATATGCTTTCCGCGCAAAATAATACTGACTACAAGCGGATGCTGCGTATTTTCCAGGAGGCGCTGGATTTACAGGAACATATTTCGGTCAGTTTGCATCAGCCGGAAGAGGTGCAAAAGCTGGTCGAGCGTAGCCATGCGGAAGAAGTTATCCGCTGGAATGCGCAAACCGTCGCCGCTCGCCTGCGCGTGCTGGCTGATGACATTCTTTACCATCGCCTGCCAACGCGTTTTACGATGGAAAAGCAAATTGGCGCACTGGAAAAAATCGCCCGCCAGCATCCGGATAATCCGGTTGGGCAATTCTGCTACTGGCATTTCAGCCGCATCGCCCGCGTGCTGCGCACCCAAAAACCGCTCTATGCCCGTGACTTACTGGCCGATAAACAGCGGCGAATGCCATTACTTCCGGCGCTGAAAAGTTATCTGTCACTAAAGTCTCCGGCGCTACGCAATGCCGGACGACTCAGTGTGATGTTAAGCGTTGCCAGCCTGATGGGCACCGCGCTGCATCTGCCGAAGTCGTACTGGATCCTGATGACGGTATTGCTGGTGACACAAAATGGCTATGGCGCAACCCGTCTGAGGATTGTGAATCGCTCCGTGGGAACCGTGGTCGGGTTAATCATTGCGGGCGTGGCGCTGCACTTTAAAATTCCCGAAGGTTACACCCTGACGTTGATGCTGATTACCACCCTCGCCAGCTACCTGATATTGCGCAAAAACTACGGCTGGGCGACGGTCGGTTTTACTATTACCGCAGTGTATACCCTGCAACTATTGTGGTTGAACGGCGAGCAATACATCCTTCCGCGTCTTATCGATACCATTATTGGTTGTTTAATTGCTTTCGGCGGTACTGTCTGGCTGTGGCCGCAGTGGCAGAGCGGGTTATTGCGTAAAAACGCCCATGATGCTTTAGAAGCCTATCAGGAAGCGATTCGCTTGATTCTTAGCGAGGATCCGCAACCTACGCCACTGGCCTGGCAGCGAATGCGGGTAAATCAGGCACATAACACTCTGTATAACTCATTGAATCAGGCGATGCAGGAACCGGCGTTTAACAGCCATTATCTGGCAGATATGAAACTGTGGGTAACGCACAGCCAGTTTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGTATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGCACACCATTTCGTCGATGGCATGGCGTCAGCGACCGCATCACGGGATTTGGCTGAGTCGCAAGTTGCGGGATTCGAAGGCGTAA", 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"MFPPMWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLFSLVPACCNIAGLDTPHKRFFKRLIIGASLFATCSLLTQLLLAKDVPLPFLLTGLTLVLGVTAELGPLHAKLLPASLLAAIFTLSLAGYMPVWEPLLIYALGTLWYGLFNWFWFWIWREQPLRESLSLLYRELADYCEAKYSLLTQHTDPEKALPPLLVRQQKAVDLITQCYQQMHMLSAQNNTDYKRMLRIFQEALDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARLRVLADDILYHRLPTRFTMEKQIGALEKIARQHPDNPVGQFCYWHFSRIARVLRTQKPLYARDLLADKQRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPKSYWILMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTLTLMLITTLASYLILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFGGTVWLWPQWQSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSLNQAMQEPAFNSHYLADMKLWVTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAIQRCQQRLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQRVIGHLNTMHTISSMAWRQRPHHGIWLSRKLRDSKA", - "protein_translation_length": 700, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131238" - ], - [ - "gene_synonym", - "alaB" - ], - [ - "gene_synonym", - "Arg1" - ], - [ - "gene_synonym", - "JW3322" - ], - [ - "gene_synonym", - "dapC" - ], - [ - "gene_synonym", - "NP_417818.1" - ], - [ - "gene_synonym", - "b3359" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P18335" - ], - [ - "gene_synonym", - "ASAP:ABE-0010976" - ], - [ - "gene_synonym", - "EcoGene:EG10066" - ], - [ - "gene_synonym", - "GeneID:947864" - ], - [ - "gene_synonym", - "argD" - ], - [ - "gene_synonym", - "ECK3347" - ], - [ - "gene_synonym", - "dtu" - ], - [ - "gene_synonym", - "argG" - ] - ], - "dna_sequence": "ATGGCAATTGAACAAACAGCAATTACACGCGCGACTTTCGATGAAGTGATCCTGCCGATTTATGCTCCGGCAGAGTTTATTCCGGTAAAAGGTCAGGGCAGCCGAATCTGGGATCAGCAAGGCAAGGAGTATGTCGATTTCGCGGGTGGCATTGCAGTTACGGCGTTGGGCCATTGCCATCCTGCGCTGGTGAACGCGTTAAAAACCCAGGGCGAAACTCTGTGGCATATCAGTAACGTTTTCACCAATGAACCGGCGCTGCGTCTTGGGCGTAAACTGATTGAGGCAACGTTTGCCGAACGCGTGGTGTTTATGAACTCCGGCACGGAAGCTAACGAAACCGCCTTTAAACTGGCACGCCATTACGCCTGTGTGCGTCATAGCCCGTTCAAAACCAAAATTATTGCCTTCCATAACGCTTTTCATGGTCGCTCGCTGTTTACCGTTTCGGTGGGTGGGCAGCCAAAATATTCCGACGGCTTTGGGCCGAAACCGGCAGACATCATCCACGTTCCCTTTAACGATCTCCATGCAGTGAAAGCGGTGATGGATGATCACACCTGTGCGGTGGTGGTTGAGCCGATCCAGGGCGAGGGCGGTGTGACGGCAGCGACGCCAGAGTTTTTGCAGGGCTTGCGCGAGCTGTGCGATCAACATCAGGCATTATTGGTGTTTGATGAAGTGCAGTGCGGGATGGGGCGGACCGGCGATTTGTTTGCTTACATGCACTACGGCGTTACGCCGGATATTCTGACCTCTGCGAAAGCGTTAGGCGGCGGCTTCCCGATTAGCGCCATGCTGACCACGGCGGAAATTGCTTCTGCGTTTCATCCTGGTTCTCACGGTTCCACCTACGGCGGTAATCCTCTGGCCTGTGCAGTAGCGGGGGCGGCGTTTGATATCATCAATACCCCTGAAGTGCTGGAAGGCATTCAGGCGAAACGCCAGCGTTTTGTTGACCATCTGCAGAAGATCGATCAGCAGTACGATGTATTTAGCGATATTCGCGGTATGGGGCTGTTGATTGGCGCAGAGCTGAAACCACAGTACAAAGGTCGGGCGCGTGATTTCCTGTATGCGGGCGCAGAGGCTGGCGTAATGGTGCTGAATGCCGGACCGGATGTGATGCGTTTTGCACCGTCGCTGGTGGTGGAAGATGCGGATATCGATGAAGGGATGCAACGTTTCGCCCACGCGGTGGCGAAGGTGGTTGGGGCGTAA", 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"gene_synonym", - "GeneID:947873" - ], - [ - "gene_synonym", - "NP_417819.1" - ], - [ - "gene_synonym", - "JW3323" - ], - [ - "gene_synonym", - "ECK3348" - ], - [ - "gene_synonym", - "pabA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00903" - ], - [ - "gene_synonym", - "ASAP:ABE-0010983" - ] - ], - "dna_sequence": "ATGATCCTGCTTATAGATAACTACGATTCTTTTACCTGGAACCTCTACCAGTACTTTTGTGAACTGGGGGCGGATGTGCTGGTTAAGCGCAACGATGCGTTGACGCTGGCGGATATCGACGCCCTTAAACCACAAAAAATTGTCATCTCACCTGGCCCCTGTACGCCAGATGAAGCCGGGATCTCCCTTGACGTTATTCGCCACTATGCCGGGCGCTTGCCGATTCTTGGCGTCTGCCTCGGTCATCAGGCAATGGCGCAGGCATTTGGCGGTAAAGTTGTGCGCGCCGCAAAGGTCATGCACGGCAAAACCTCGCCGATTACACATAACGGTGAGGGCGTATTTCGGGGGCTGGCAAATCCACTTACCGTGACACGCTACCATTCGCTGGTGGTGGAACCTGACTCATTACCAGCGTGCTTTGACGTGACGGCCTGGAGCGAAACCCGAGAGATTATGGGGATTCGCCATCGCCAGTGGGATCTGGAAGGTGTGCAGTTCCATCCAGAAAGTATTCTTAGCGAACAAGGACATCAACTGCTGGCTAATTTCCTGCATCGCTGA", - "dna_sequence_length": 564, - "functions": [ - "aminodeoxychorismate synthase, subunit II" - ], - "id": "CDS_3299", - "location": [ - [ - "NC_000913", - 3490829, - "-", - 564 - ] - ], - "md5": "e0d1a814c761c5c1c1a4bd3b5aa79433", - "parent_gene": "", - "protein_md5": "561642d7f46dcb3b4b9a787724e0baaa", - "protein_translation": "MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHGKTSPITHNGEGVFRGLANPLTVTRYHSLVVEPDSLPACFDVTAWSETREIMGIRHRQWDLEGVQFHPESILSEQGHQLLANFLHR", - "protein_translation_length": 187, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3361" - ], - [ - "gene_synonym", - "GeneID:947872" - ], - [ - "gene_synonym", - "JW3324" - ], - [ - "gene_synonym", - "fic" - ], - [ - "gene_synonym", - "ECK3349" - ], - [ - "gene_synonym", - "EcoGene:EG10307" - ], - [ - "gene_synonym", - "NP_417820.1" - ], - [ - "gene_synonym", - "GI:16131240" - ], - [ - "gene_synonym", - "vhpT" - ], - [ - "gene_synonym", - "ASAP:ABE-0010987" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P20605" - ] - ], - "dna_sequence": "ATGAGCGATAAATTCGGCGAAGGGCGCGATCCGTATCTTTATCCAGGCCTTGATATCATGCGTAACCGGCTGAACATCCGCCAGCAGCAGCGGCTGGAACAGGCCGCTTACGAAATGACGGCGCTGCGTGCTGCGACCATTGAGCTTGGTCCGCTGGTGCGCGGTTTACCGCATTTGCGAACTATCCATCGCCAGCTGTATCAGGATATTTTCGACTGGGCAGGGCAACTGCGTGAAGTTGATATTTATCAGGGTGATACGCCGTTCTGCCACTTTGCTTATATCGAAAAAGAGGGCAATGCCCTGATGCAGGATCTGGAGGAAGAAGGTTATCTGGTTGGCCTGGAGAAAGCGAAGTTCGTCGAGCGGCTGGCGCATTACTATTGTGAAATCAACGTGCTGCATCCCTTCCGGGTGGGAAGTGGTCTGGCACAGCGGATCTTCTTCGAGCAACTGGCGATTCATGCCGGATATCAACTGAGCTGGCAGGGTATCGAAAAAGAGGCCTGGAATCAGGCAAATCAGAGTGGGGCAATGGGGGATCTCACCGCACTGCAGATGATATTTAGCAAAGTGGTAAGCGAAGCCGGGGAATCTGAGTAA", - "dna_sequence_length": 603, - "functions": [ - "stationary phase-induced protein, putative toxin" - ], - "id": "CDS_3300", - "location": [ - [ - "NC_000913", - 3491463, - "-", - 603 - ] - ], - "md5": "49fbed09e39a8fdaa083ed0a07a390b9", - "parent_gene": "", - "protein_md5": "aee8e5d8a562867c6ef59667b804c2ed", - "protein_translation": 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"putative antitoxin for Fic" - ], - "id": "CDS_3301", - "location": [ - [ - "NC_000913", - 3491620, - "-", - 168 - ] - ], - "md5": "68e533fcc9d85c286caf82ec6050ee8a", - "parent_gene": "", - "protein_md5": "6aa8dfa0cc24636775eed62d25a0028f", - "protein_translation": "MKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTAAEALARLEELRSHYER", - "protein_translation_length": 55, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3363" - ], - [ - "gene_synonym", - "GeneID:947870" - ], - [ - "gene_synonym", - "NP_417822.1" - ], - [ - "gene_synonym", - "JW3326" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFL3" - ], - [ - "gene_synonym", - "rot" - ], - [ - "gene_synonym", - "EcoGene:EG10757" - ], - [ - "gene_synonym", - "rotA" - ], - [ - "gene_synonym", - "GI:16131242" - ], - [ - "gene_synonym", - "ECK3351" - ], - [ - "gene_synonym", - "ASAP:ABE-0010992" - ], - [ - "gene_synonym", - "ppiA" - ] - ], - "dna_sequence": "ATGTTCAAATCGACCCTGGCGGCGATGGCTGCTGTTTTCGCTCTTTCTGCTCTTTCTCCCGCAGCAATGGCAGCGAAAGGGGACCCGCACGTATTGTTGACAACCTCAGCTGGTAACATCGAACTGGAGCTGGATAAACAAAAAGCGCCAGTGTCTGTGCAAAACTTTGTCGATTATGTGAACAGCGGTTTTTATAACAACACTACCTTTCACCGCGTCATTCCTGGCTTTATGATTCAGGGCGGCGGTTTCACCGAGCAGATGCAGCAGAAAAAACCAAACCCGCCAATCAAAAATGAAGCCGATAACGGCCTGCGCAACACGCGTGGCACCATCGCGATGGCACGTACCGCTGACAAAGACAGCGCCACCAGCCAGTTCTTTATCAACGTTGCCGATAACGCCTTCCTTGACCATGGTCAGCGTGATTTCGGTTACGCGGTATTTGGTAAAGTGGTGAAAGGCATGGACGTTGCCGATAAGATTTCCCAGGTGCCGACTCATGACGTTGGTCCGTACCAGAATGTGCCGTCAAAACCGGTAGTTATCCTTTCCGCTAAAGTCCTGCCGTAA", - "dna_sequence_length": 573, - "functions": [ - "peptidyl-prolyl cis-trans isomerase A (rotamase A)" - ], - "id": "CDS_3302", - "location": [ - [ - "NC_000913", - 3492297, - "-", - 573 - ] - ], - "md5": "6ec746748b84990811ce73bb650a33ac", - "parent_gene": "", - "protein_md5": "6ed557e63f9430a407a0ba7bc8dff3e8", - "protein_translation": "MFKSTLAAMAAVFALSALSPAAMAAKGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILSAKVLP", - "protein_translation_length": 190, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yhfH" - ], - [ - "gene_synonym", - "GeneID:947869" - ], - [ - "gene_synonym", - "b3364" - ], - [ - "gene_synonym", - "JW3327" - ], - [ - "gene_synonym", - "yhfC" - ], - [ - "gene_synonym", - "gutS" - ], - [ - "gene_synonym", - "ASAP:ABE-0010997" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60778" - ], - [ - "gene_synonym", - "NP_417823.1" - ], - [ - "gene_synonym", - "EcoGene:EG11262" - ], - [ - "gene_synonym", - "GI:16131243" - ], - [ - "gene_synonym", - "tsgA" - ], - [ - "gene_synonym", - "ECK3352" - ] - ], - "dna_sequence": "ATGACTAACAGCAATCGCATCAAGCTCACATGGATTAGCTTTCTCTCCTACGCACTGACTGGTGCGTTGGTTATTGTCACCGGGATGGTGATGGGAAATATCGCCGATTATTTCAATCTGCCTGTTTCCAGTATGAGTAATACCTTCACCTTCCTCAACGCCGGCATTTTAATCTCTATCTTCCTCAACGCCTGGCTGATGGAAATCGTCCCGTTGAAAACGCAGTTACGTTTTGGCTTTCTCCTGATGGTGCTGGCGGTTGCCGGTTTGATGTTCAGCCACAGCCTGGCGCTGTTCTCGGCGGCGATGTTCATTCTCGGGGTGGTCAGCGGCATCACCATGTCGATTGGTACATTCCTGGTAACACAAATGTATGAAGGGCGTCAGCGCGGTTCCCGCCTGTTATTTACCGACTCCTTCTTCAGTATGGCTGGGATGATTTTCCCAATGATCGCCGCGTTTCTACTGGCGCGCAGCATTGAGTGGTACTGGGTTTATGCCTGCATCGGGCTGGTGTATGTCGCTATTTTTATTCTGACCTTCGGCTGTGAGTTCCCGGCGCTGGGCAAACATGCGCCAAAAACGGATGCTCCGGTAGAGAAAGAAAAGTGGGGGATCGGCGTACTGTTTCTCTCTGTTGCGGCGTTGTGCTACATCCTCGGTCAGTTAGGTTTTATCTCCTGGGTGCCTGAGTATGCCAAAGGCCTGGGCATGAGCCTGAACGACGCGGGCACGCTGGTGAGTAACTTCTGGATGTCATACATGGTCGGCATGTGGGCGTTCAGCTTTATTCTTCGCTTCTTTGATTTGCAACGCATTCTGACCGTACTGGCTGGTCTGGCTGCGATTCTGATGTACGTCTTTAACACCGGAACACCAGCACATATGGCGTGGTCAATTCTCGCTCTGGGCTTCTTCTCCAGCGCGATCTATACCACCATCATCACCCTGGGTTCACAGCAGACCAAAGTACCGTCGCCAAAACTGGTTAACTTTGTCCTGACCTGCGGAACCATCGGTACTATGTTGACCTTTGTGGTTACCGGCCCGATCGTTGAACATAGCGGTCCGCAGGCGGCACTGCTTACAGCAAACGGTCTGTACGCTGTCGTCTTTGTGATGTGCTTCCTGTTAGGTTTCGTCAGCCGTCACCGTCAGCATAACACCCTGACCTCTCATTAA", 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"ASAP:ABE-0011003" - ], - [ - "gene_synonym", - "NP_417824.1" - ], - [ - "gene_synonym", - "nirB" - ], - [ - "gene_synonym", - "GI:16131244" - ], - [ - "gene_synonym", - "ECK3353" - ], - [ - "gene_synonym", - "EcoGene:EG10653" - ] - ], - "dna_sequence": "ATGAGCAAAGTCAGACTCGCAATTATCGGTAACGGTATGGTCGGCCATCGCTTTATCGAAGATCTTCTTGATAAATCTGATGCGGCCAACTTTGATATTACCGTTTTCTGTGAAGAACCGCGCATCGCTTATGACCGCGTACACCTCTCGTCTTACTTCTCTCACCACACCGCCGAAGAGCTGTCGCTGGTGCGCGAAGGCTTCTACGAGAAACACGGCATCAAAGTTCTGGTCGGCGAACGCGCTATCACCATCAACCGTCAGGAGAAGGTGATTCACTCCAGCGCCGGACGTACCGTTTTTTATGACAAGCTGATCATGGCAACCGGTTCCTACCCGTGGATCCCGCCAATCAAAGGTTCTGATACTCAGGACTGCTTTGTCTATCGCACTATTGAAGACCTCAACGCCATTGAATCCTGCGCCCGTCGCAGCAAACGCGGTGCCGTTGTTGGTGGCGGCCTGTTAGGTCTGGAAGCCGCAGGCGCGCTGAAAAACTTAGGTATTGAAACCCACGTTATCGAATTTGCCCCTATGCTGATGGCAGAACAGCTTGATCAGATGGGCGGCGAGCAGCTGCGTCGCAAAATCGAAAGTATGGGCGTGCGCGTTCACACCAGCAAAAACACCCTTGAGATTGTGCAGGAAGGTGTTGAAGCGCGTAAAACCATGCGTTTTGCCGACGGCAGCGAACTGGAAGTCGACTTTATCGTCTTCTCTACCGGTATCCGTCCGCGCGATAAGCTGGCAACCCAGTGTGGTCTGGACGTTGCTCCGCGTGGGGGTATTGTCATTAATGATTCCTGCCAGACTTCCGATCCGGATATCTACGCCATCGGTGAATGCGCAAGCTGGAACAACCGTGTATTTGGTCTGGTAGCACCTGGCTACAAAATGGCGCAGGTCGCCGTTGACCATATTCTCGGTAGCGAAAACGCCTTTGAAGGTGCTGACCTTAGCGCCAAGCTGAAACTGCTGGGCGTAGACGTAGGCGGTATTGGTGATGCGCACGGTCGCACGCCTGGCGCACGTAGCTACGTTTACCTCGACGAAAGTAAAGAGATCTACAAACGCCTGATTGTCAGCGAAGACAACAAAACCCTGCTCGGTGCGGTACTGGTGGGCGATACCAGCGACTACGGTAACCTGCTGCAACTGGTGCTGAACGCTATCGAACTGCCGGAAAACCCGGATTCCCTGATCCTGCCAGCACACTCGGGTAGCGGCAAGCCGTCTATCGGTGTTGATAAACTGCCGGACAGCGCGCAAATCTGCTCCTGCTTCGACGTCACCAAAGGTGATCTGATTGCTGCCATCAACAAAGGCTGCCACACAGTTGCGGCGCTGAAAGCTGAAACCAAAGCGGGTACTGGCTGCGGTGGCTGTATCCCGCTGGTCACTCAGGTACTGAACGCGGAACTGGCGAAACAGGGCATCGAAGTTAACAACAACCTGTGCGAACACTTTGCTTATTCGCGTCAGGAACTGTTCCATTTGATCCGCGTTGAAGGCATTAAAACCTTCGAAGAACTGCTGGCGAAACACGGCAAAGGCTACGGTTGTGAAGTTTGTAAACCAACCGTCGGTTCGCTGCTGGCCTCCTGCTGGAACGAATACATTCTGAAGCCGGAACATACTCCGCTGCAGGATTCTAACGACAACTTCCTCGCTAACATCCAGAAAGACGGCACCTACTCGGTGATCCCGCGTTCTCCGGGCGGTGAAATCACCCCGGAAGGGCTGATGGCGGTAGGTCGTATCGCGCGTGAATTTAATCTCTACACCAAGATCACTGGCTCCCAGCGTCTGGCGATGTTTGGCGCACAGAAAGACGATCTGCCGGAGATCTGGCGTCAGCTGATTGAAGCCGGCTTCGAAACCGGTCATGCCTATGCGAAAGCACTGCGTATGGCGAAAACCTGCGTGGGTAGCACCTGGTGCCGCTACGGCGTTGGCGACAGCGTCGGCCTCGGCGTGGAACTGGAAAACCGCTACAAAGGCATCCGTACGCCGCACAAAATGAAGTTCGGTGTCTCCGGCTGTACCCGTGAATGTTCAGAAGCTCAGGGTAAAGACGTGGGTATTATCGCCACTGAAAAAGGCTGGAACCTGTATGTTTGCGGTAACGGCGGCATGAAACCGCGTCATGCGGATCTGCTGGCGGCGGATATCGATCGCGAAACGCTGATCAAATATCTCGACCGCTTCATGATGTTCTACATCCGTACTGCCGACAAACTGACGCGTACCGCACCGTGGTTAGAAAACCTCGAAGGCGGCATCGATTACCTGAAAGCAGTGATCATTGACGACAAACTGGGGCTGAACGCACATCTGGAAGAAGAGATGGCGCGCCTGCGTGAAGCGGTACTGTGTGAGTGGACTGAAACGGTCAATACGCCGTCTGCGCAGACTCGCTTCAAACACTTCATCAACAGCGACAAGCGTGACCCGAACGTGCAGATGGTGCCAGAGCGCGAACAGCACCGTCCGGCAACGCCGTATGAACGTATCCCAGTAACTCTGGTGGAGGACAACGCATGA", 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"MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAYDRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFYDKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEAAGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGVEARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDIYAIGECASWNNRVFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIGDAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIELPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALKAETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTFEELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYSVIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAGFETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCTRECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADIDRETLIKYLDRFMMFYIRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVLCEWTETVNTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA", - "protein_translation_length": 847, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10655" - ], - [ - "gene_synonym", - "b3366" - ], - [ - "gene_synonym", - "JW3329" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9I8" - ], - [ - "gene_synonym", - "ASAP:ABE-0011005" - ], - [ - "gene_synonym", - "nirD" - ], - [ - "gene_synonym", - "GeneID:947881" - ], - [ - "gene_synonym", - "NP_417825.1" - ], - [ - "gene_synonym", - "ECK3354" - ], - [ - "gene_synonym", - "GI:16131245" - ] - ], - "dna_sequence": "ATGAGCCAGTGGAAAGACATCTGCAAAATCGATGACATCCTGCCTGAAACCGGCGTCTGCGCGCTGTTAGGTGACGAGCAGGTCGCGATTTTCCGCCCGTATCACAGCGATCAGGTGTTTGCGATCAGCAACATCGACCCGTTCTTCGAGTCCAGCGTGCTGTCACGCGGACTGATTGCGGAACACCAGGGCGAGCTGTGGGTCGCCAGCCCGCTGAAAAAACAGCGTTTTCGCTTAAGCGACGGCTTGTGCATGGAAGACGAACAGTTTTCCGTCAAACATTACGAAGCGCGAGTGAAAGACGGCGTGGTGCAGCTGCGCGGTTAA", - "dna_sequence_length": 327, - "functions": [ - "nitrite reductase (NADH) small subunit" - ], - "id": "CDS_3305", - "location": [ - [ - "NC_000913", - 3496551, - "+", - 327 - ] - ], - "md5": "5172060a19fabfc08c62a31b735ba292", - "parent_gene": "", - "protein_md5": "29e426187f3b2d75f464f93349cae78b", - "protein_translation": "MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISNIDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDGVVQLRG", - "protein_translation_length": 108, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3330" - ], - [ - "gene_synonym", - "EcoGene:EG10654" - ], - [ - "gene_synonym", - "GI:90111575" - ], - [ - "gene_synonym", - "b3367" - ], - [ - "gene_synonym", - "GeneID:2847757" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC26" - ], - [ - "gene_synonym", - "YP_026212.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0011008" - ], - [ - "gene_synonym", - "nirC" - ], - [ - "gene_synonym", - "ECK3355" - ] - ], - "dna_sequence": "ATGTTTACAGACACTATTAATAAGTGTGCGGCTAACGCTGCGCGCATTGCACGCCTGTCGGCAAATAACCCGCTCGGCTTTTGGGTCAGCTCCGCCATGGCGGGCGCGTATGTGGGTCTTGGGATCATCCTGATTTTCACGCTCGGTAATTTGCTCGATCCATCCGTACGCCCTTTGGTGATGGGCGCGACCTTTGGTATCGCCTTAACGCTGGTGATTATCGCCGGTTCTGAACTGTTCACCGGACACACCATGTTCCTCACCTTTGGGGTAAAAGCGGGCAGCATCAGCCACGGGCAAATGTGGGCAATCCTGCCGCAAACCTGGCTGGGTAACCTGGTCGGTTCCGTCTTCGTTGCCATGCTCTATAGCTGGGGCGGCGGTAGCCTGCTGCCGGTAGATACCAGCATCGTTCACTCCGTCGCGCTGGCTAAAACCACTGCACCGGCAATGGTACTCTTCTTCAAAGGTGCATTGTGTAACTGGCTGGTTTGCCTGGCAATCTGGATGGCGCTGCGCACTGAAGGGGCGGCGAAATTTATCGCTATCTGGTGGTGTCTGCTGGCATTTATCGCGTCCGGCTACGAGCACTCTATCGCTAACATGACGCTGTTCGCGCTCTCCTGGTTCGGCAACCACAGCGAAGCCTACACGCTGGCGGGTATTGGTCATAACCTGCTGTGGGTGACGCTGGGTAATACTTTATCAGGTGCCGTATTCATGGGATTGGGTTATTGGTATGCTACGCCGAAAGCGAATCGTCCGGTTGCGGACAAATTTAATCAAACTGAAACGGCTGCCGGTTAA", - "dna_sequence_length": 807, - "functions": [ - "nitrite transporter" - ], - "id": "CDS_3306", - "location": [ - [ - "NC_000913", - 3497003, - "+", - 807 - ] - ], - "md5": "e41a37acae5d687764b3d0d0df815ad1", - "parent_gene": "", - "protein_md5": "60cc16d3867fddc59ceac02648228f66", - "protein_translation": "MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMWAILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALCNWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYTLAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKANRPVADKFNQTETAAG", - "protein_translation_length": 268, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3331" - ], - [ - "gene_synonym", - "NP_417827.1" - ], - [ - "gene_synonym", - "GeneID:947880" - ], - [ - "gene_synonym", - "cysG" - ], - [ - "gene_synonym", - "b3368" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEA8" - ], - [ - "gene_synonym", - "ASAP:ABE-0011010" - ], - [ - "gene_synonym", - "EcoGene:EG10188" - ], - [ - "gene_synonym", - "ECK3356" - ], - [ - "gene_synonym", - "GI:16131246" - ] - ], - "dna_sequence": "GTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCGCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTGCTGGCTGGCGATTGCAGCGACGGATGATGACGCGCTTAACCAGCGCGTCAGCGAAGCCGCTGAAGCTCGTCGCATCTTCTGTAACGTGGTCGATGCGCCGAAAGCCGCCAGCTTTATTATGCCGTCGATTATTGACCGCTCACCGCTCATGGTAGCGGTCTCCTCTGGCGGCACCTCTCCGGTTCTGGCACGCCTGTTGCGCGAAAAACTTGAATCACTGCTGCCGTTACATCTGGGCCAGGTAGCGAAATACGCCGGGCAATTACGCGGGCGAGTGAAACAACAGTTCGCCACGATGGGTGAGCGTCGCCGTTTCTGGGAGAAATTGTTCGTTAACGACCGCCTGGCGCAGTCGCTGGCAAACAACGATCAGAAAGCCATTACTGAAACGACCGAACAGTTAATCAACGAACCGCTCGACCATCGCGGTGAAGTGGTGCTGGTTGGTGCAGGTCCGGGCGATGCCGGGCTGCTGACACTGAAAGGACTGCAACAAATTCAGCAGGCAGATGTGGTGGTCTACGACCGTCTGGTTTCTGACGATATTATGAATCTGGTACGCCGCGATGCGGACCGTGTTTTCGTCGGCAAACGCGCGGGATACCACTGCGTACCCCAGGAAGAGATTAACCAGATCCTGCTGCGGGAAGCGCAAAAAGGCAAACGCGTGGTGCGGCTGAAAGGTGGCGATCCGTTTATTTTTGGCCGTGGTGGCGAAGAGCTGGAAACACTGTGCAACGCGGGTATTCCGTTCTCGGTGGTTCCGGGTATTACCGCAGCTTCTGGTTGCTCTGCCTATTCGGGTATTCCACTCACGCATCGCGATTATGCCCAGAGCGTACGCTTAATTACCGGACACTTAAAAACCGGTGGCGAGCTGGACTGGGAAAACCTGGCGGCAGAAAAACAGACGCTGGTGTTCTATATGGGGTTGAATCAGGCCGCGACTATTCAGCAAAAGCTGATTGAACACGGAATGCCAGGCGAAATGCCGGTGGCAATTGTCGAAAACGGTACGGCAGTCACGCAGCGCGTGATTGACGGTACGCTCACACAGCTGGGAGAACTGGCGCAGCAAATGAACAGTCCATCGCTAATTATTATTGGTCGGGTTGTTGGCCTGCGCGATAAACTGAACTGGTTCTCCAACCATTAA", - "dna_sequence_length": 1374, - "functions": [ - "fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferase" - ], - "id": "CDS_3307", - "location": [ - [ - "NC_000913", - 3497828, - "+", - 1374 - ] - ], - "md5": "811c6e422ab9ff98407fa918fa31e909", - "parent_gene": "", - "protein_md5": "bcb8e161f48f6e3676da4c08055496db", - "protein_translation": "MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDALNQRVSEAAEARRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQLRGRVKQQFATMGERRRFWEKLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEVVLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHCVPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAASGCSAYSGIPLTHRDYAQSVRLITGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQQKLIEHGMPGEMPVAIVENGTAVTQRVIDGTLTQLGELAQQMNSPSLIIIGRVVGLRDKLNWFSNH", - "protein_translation_length": 457, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3332" - ], - [ - "gene_synonym", - "EcoGene:EG12907" - ], - [ - "gene_synonym", - "yhfL" - ], - [ - "gene_synonym", - "b3369" - ], - [ - "gene_synonym", - "ASAP:ABE-0011016" - ], - [ - "gene_synonym", - "GeneID:947879" - ], - [ - "gene_synonym", - "NP_417828.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64627" - ], - [ - "gene_synonym", - "ECK3357" - ], - [ - "gene_synonym", - "GI:16131247" - ] - ], - "dna_sequence": "ATGAACAAATTTATTAAAGTTGCACTGGTAGGTGCAGTACTGGCTACGTTAACTGCATGTACTGGTCATATTGAAAACCGTGATAAGAACTGCTCTTACGACTACCTGCTGCACCCGGCAATTTCTATTTCTAAAATCATTGGCGGTTGCGGTCCTACTGCACAGTAA", - "dna_sequence_length": 168, - "functions": [ - "small lipoprotein" - ], - "id": "CDS_3308", - "location": [ - [ - "NC_000913", - 3499448, - "+", - 168 - ] - ], - "md5": "a09c0db006cf2bf786abe001a55f0b44", - "parent_gene": "", - "protein_md5": "76ba5d1213b18a531b417abd1f61de8f", - "protein_translation": "MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISISKIIGGCGPTAQ", - "protein_translation_length": 55, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "frlA" - ], - [ - "gene_synonym", - "JW3333" - ], - [ - "gene_synonym", - "yhfM" - ], - [ - "gene_synonym", - "NP_417829.2" - ], - [ - "gene_synonym", - "GeneID:947878" - ], - [ - "gene_synonym", - "EcoGene:EG12908" - ], - [ - "gene_synonym", - "b3370" - ], - [ - "gene_synonym", - "GI:90111576" - ], - [ - "gene_synonym", - "ECK3358" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45539" - ], - [ - "gene_synonym", - "ASAP:ABE-0011019" - ] - ], - "dna_sequence": "ATGGGAAGCCAGGAACTCCAACGCAAGCTCGGATTTTGGGCCGTTCTTGCAATCGCCGTCGGGACAACCGTCGGCTCCGGTATTTTTGTATCTGTGGGTGAAGTGGCAAAAGCAGCGGGCACGCCGTGGCTTACGGTGCTCGCGTTTGTCATTGGCGGGTTAATTGTGATCCCGCAAATGTGCGTCTATGCGGAACTATCCACCGCTTATCCGGAAAATGGCGCAGATTATGTTTATCTGAAAAATGCCGGAAGCCGACCGCTGGCTTTCCTCTCCGGCTGGGCCAGCTTCTGGGCCAACGATGCGCCGTCATTGTCGATTATGGCGCTGGCGATTGTCAGCAATCTTGGCTTTTTAACGCCTATCGATCCGTTGCTCGGTAAATTTATCGCCGCCGGATTAATTATCGCCTTTATGTTGCTACACCTGCGCTCCGTTGAAGGCGGCGCAGCGTTTCAGACGCTAATTACCATCGCCAAAATTATCCCGTTCACTATCGTCATTGGCCTTGGGATCTTCTGGTTTAAAGCGGAGAATTTTGCCGCCCCTACCACCACTGCGATTGGCGCAACGGGCAGCTTTATGGCGCTGCTGGCGGGGATCTCTGCCACCAGTTGGTCGTATACCGGCATGGCCTCTATCTGTTATATGACCGGCGAAATTAAAAACCCCGGAAAAACCATGCCACGAGCGCTGATTGGTTCCTGTCTGCTGGTTCTGGTGCTCTACACCCTGCTGGCGCTGGTGATTTCCGGCCTGATGCCCTTCGACAAACTCGCCAATTCTGAAACGCCGATTTCCGACGCCCTGACCTGGATCCCCGCACTCGGCAGCACCGCTGGGATCTTTGTTGCCATCACGGCGATGATCGTCATTCTTGGTTCGCTTTCCAGCTGCGTGATGTACCAGCCGCGGCTGGAATACGCGATGGCGAAAGACAACCTGTTCTTTAAATGCTTCGGCCATGTGCATCCGAAATACAACACGCCGGATGTCTCCATCATCCTGCAAGGGGCGCTGGGGATCTTCTTCATCTTCGTTTCCGATCTCACCAGCCTGCTGGGTTATTTCACCCTGGTGATGTGTTTCAAAAATACCCTCACCTTCGGCTCCATCATCTGGTGTCGTAAACGCGACGATTACAAACCGCTGTGGCGTACTCCGGCTTTCGGGCTGATGACCACCCTCGCCATTGCGTCAAGCCTCATTCTGGTCGCCTCAACCTTTGTCTGGGCACCGATTCCCGGCCTTATCTGCGCCGTCATCGTTATTGCTACTGGTCTGCCTGCTTACGCCTTCTGGGCGAAGCGTAGCCGCCAGCTCAACGCTTTGTCGTAA", - "dna_sequence_length": 1338, - "functions": [ - "putative fructoselysine transporter" - ], - "id": "CDS_3309", - "location": [ - [ - "NC_000913", - 3499910, - "+", - 1338 - ] - ], - "md5": "c2b61afa66ab1b63fd408b16f302d593", - "parent_gene": "", - "protein_md5": "821cb6f8ab1ad95db1f740e57c0d4cc3", - "protein_translation": "MGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKRDDYKPLWRTPAFGLMTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAFWAKRSRQLNALS", - "protein_translation_length": 445, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC00" - ], - [ - "gene_synonym", - "frlB" - ], - [ - "gene_synonym", - "JW5700" - ], - [ - "gene_synonym", - "ASAP:ABE-0011021" - ], - [ - "gene_synonym", - "yhfN" - ], - [ - "gene_synonym", - "GeneID:947875" - ], - [ - "gene_synonym", - "EcoGene:EG12909" - ], - [ - "gene_synonym", - "GI:162135909" - ], - [ - "gene_synonym", - "b3371" - ], - [ - "gene_synonym", - "ECK3359" - ], - [ - "gene_synonym", - "NP_417830.4" - ] - ], - "dna_sequence": "ATGTTGGATATTGATAAAAGCACCGTGGACTTTCTGGTCACCGAAAATATGGTTCAGGAAGTGGAAAAAGTTCTCAGCCATGACGTTCCGCTGGTGCACGCCATCGTGGAAGAGATGGTGAAGCGCGACATTGATCGTATTTATTTCGTTGCCTGCGGATCGCCACTCAACGCGGCGCAAACGGCGAAACATCTGGCGGATCGCTTTTCCGATCTTCAGGTCTACGCCATTTCCGGCTGGGAGTTCTGCGATAACACCCCGTATCGCCTCGACGATCGTTGCGCAGTAATTGGCGTTTCTGACTACGGTAAAACCGAAGAGGTAATCAAAGCGCTGGAGCTGGGCCGGGCCTGCGGCGCACTCACTGCGGCGTTCACCAAACGCGCGGATAGCCCGATTACCTCGGCGGCGGAATTTAGCATTGATTATCAGGCCGACTGTATCTGGGAAATTCACCTGCTGCTCTGCTACAGCGTGGTGCTGGAGATGATCACCCGCCTCGCGCCGAACGCGGAAATCGGCAAGATCAAAAACGATCTCAAGCAGTTGCCGAATGCGCTCGGTCATCTGGTACGCACCTGGGAAGAAAAAGGCCGCCAGCTTGGTGAACTGGCCAGCCAGTGGCCGATGATTTATACCGTTGCTGCGGGTCCGCTGCGTCCGCTGGGTTACAAAGAAGGCATTGTAACGCTGATGGAATTTACCTGGACGCACGGCTGCGTGATTGAGAGCGGAGAGTTCCGCCATGGCCCGCTGGAGATTGTCGAACCGGGCGTTCCGTTCCTGTTCCTGCTCGGCAATGATGAAAGTCGCCACACCACCGAACGCGCCATTAACTTTGTTAAACAGCGTACTGACAACGTGATCGTCATCGATTACGCCGAAATTTCGCAAGGGCTGCACCCGTGGCTGGCACCGTTCCTGATGTTCGTGCCAATGGAGTGGCTCTGCTACTACCTGTCTATTTACAAAGATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P45541" - ], - [ - "gene_synonym", - "YP_026213.1" - ], - [ - "gene_synonym", - "ECK3360" - ], - [ - "gene_synonym", - "JW5699" - ], - [ - "gene_synonym", - "yhfP" - ], - [ - "gene_synonym", - "GI:49176341" - ] - ], - "dna_sequence": "ATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAACACGCATTTCGTGATGCAAGCGAGCTGGGTTACGACGGCATCGAAATTTGGGGCGGTCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGGCGCTGGCGCAGACGTATCAGATGCCGATTATCGGCTATACGCCAGAAACCAACGGCTATCCGTATAACATGATGCTGGGCGATGAACATATGCGTCGCGAAAGCCTCGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATACGCTGATTTCCGCGGCCCACGCGGGCTATCTCACGCCACCTAATGTTATCTGGGGACGGCTGGCAGAGAACCTAAGCGAACTGTGTGAGTACGCGGAAAACATCGGCATGGATCTAATCCTCGAACCGTTAACGCCGTATGAATCGAACGTCGTGTGTAATGCTAATGATGTGCTTCATGCGCTGGCGCTGGTGCCTTCGCCGCGCCTGTTCAGCATGGTCGACATTTGCGCGCCGTATGTCCAGGCGGAACCGGTGATGAGTTATTTCGACAAACTGGGCGATAAATTACGTCATCTGCATATTGTCGACAGCGACGGGGCCAGCGACACGCATTACATTCCTGGAGAAGGCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGA", - "dna_sequence_length": 831, - "functions": [ - "fructoselysine 3-epimerase" - ], - "id": "CDS_3311", - "location": [ - [ - "NC_000913", - 3502340, - "+", - 831 - ] - ], - "md5": "c0510bd599fe42533799a7a2c0372119", - "parent_gene": "", - "protein_md5": "530cdc602134d988bdb3b09cabeab7ba", - "protein_translation": "MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLGDEHMRRESLDMIKLAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVCNANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTHYIPGEGKMPLRELMRDIIERGYEGYCTVELVTMYMNEPRLYARQALERFRALLPEDER", - "protein_translation_length": 276, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12912" - ], - [ - "gene_synonym", - "frlD" - ], - [ - "gene_synonym", - "JW3337" - ], - [ - "gene_synonym", - "b3374" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45543" - ], - [ - "gene_synonym", - "ASAP:ABE-0011029" - ], - [ - "gene_synonym", - "GeneID:947886" - ], - [ - "gene_synonym", - "ECK3361" - ], - [ - "gene_synonym", - "NP_417833.1" - ], - [ - "gene_synonym", - "yhfQ" - ], - [ - "gene_synonym", - "GI:16131252" - ] - ], - "dna_sequence": "ATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAATGTGGCGGTGTACTGCACTCGCTACGGCATACAGCCGGGATGCATTACCTGGGTGGGTGACGATGACTACGGCACAAAGCTGAAGCAGGATCTCGCCCGCATGGGCGTCGATATCAGCCATGTCCATACGAAACACGGCGTTACCGCACAAACTCAGGTGGAACTGCACGACAATGATCGCGTTTTTGGCGACTACACCGAAGGCGTGATGGCCGACTTTGCCCTGAGTGAAGAGGATTACGCCTGGCTGGCGCAGTATGACATTGTGCACGCGGCAATCTGGGGACATGCGGAAGACGCATTCCCACAGCTGCACGCTGCGGGCAAACTTACCGCTTTCGACTTCTCCGACAAGTGGGACAGCCCGCTCTGGCAGACACTGGTGCCGCATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGGATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGCAGGGAACGGCGTGCGCGGCGAAAACCATTCAGTACCACGGTGCCTGGTAG", - "dna_sequence_length": 786, - "functions": [ - "fructoselysine 6-kinase" - ], - "id": "CDS_3312", - "location": [ - [ - "NC_000913", - 3503167, - "+", - 786 - ] - ], - "md5": "eae05a568e4ccd6746bb18e67da3a783", - "parent_gene": "", - "protein_md5": "5f5d0186ba0c998b0b1dc84397271212", - "protein_translation": "MKTLATIGDNCVDIYPQLNKAFSGGNAVNVAVYCTRYGIQPGCITWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELHDNDRVFGDYTEGVMADFALSEEDYAWLAQYDIVHAAIWGHAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHLDFAFASAPQEDETLRLKMKAIVARGAGTVIVTLGENGSIAWDGAQFWRQAPEPVTVIDTMGAGDSFIAGFLCGWSAGMTLPQAIAQGTACAAKTIQYHGAW", - "protein_translation_length": 261, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417834.6" - ], - [ - "gene_synonym", - "ASAP:ABE-0011031" - ], - [ - "gene_synonym", - "b3375" - ], - [ - "gene_synonym", - "GI:162135910" - ], - [ - "gene_synonym", - "GeneID:947885" - ], - [ - "gene_synonym", - "ECK3362" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45544" - ], - [ - "gene_synonym", - "frlR" - ], - [ - "gene_synonym", - "EcoGene:EG12913" - ], - [ - "gene_synonym", - "JW5698" - ], - [ - "gene_synonym", - "yhfR" - ] - ], - "dna_sequence": "ATGTCAGCTACGGACCGCTACTCTCATCAACTCCTCTACGCTACCGTCCGCCAGCGACTGCTGGATGATATCGCGCAGGGGGTTTACCAGGCCGGGCAACAGATCCCTACCGAAAACGAGCTTTGTACACAATATAACGTCAGCCGCATTACCATTCGCAAAGCCATCAGCGACTTAGTGGCAGACGGCGTACTGATCCGCTGGCAGGGAAAAGGCACCTTTGTACAAAGCCAGAAAGTTGAAAACGCCCTGCTTACTGTCAGTGGTTTTACCGATTTTGGCGTCTCACAAGGCAAGGCGACGAAAGAGAAAGTGATCGAACAGGAACGGGTCAGCGCCGCGCCGTTTTGCGAAAAGCTGAACATCCCCGGAAACAGCGAAGTGTTCCATCTCTGCCGGGTGATGTATCTCGATAAAGAGCCGCTGTTTATTGATAGTTCATGGATCCCGCTGTCGCGTTATCCTGACTTTGATGAGATTTACGTCGAAGGAAGCTCCACCTATCAGTTATTTCAGGAGCGTTTTGACACGCGAGTGGTCAGCGACAAAAAGACCATCGATATCTTTGCCGCCACCCGCCCGCAGGCAAAATGGCTGAAATGCGAACTGGGCGAACCGTTGTTTCGCATCAGCAAAATCGCCTTTGATCAGAATGACAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAA", - "dna_sequence_length": 732, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_3313", - "location": [ - [ - "NC_000913", - 3504052, - "+", - 732 - ] - ], - "md5": "bd550da243ad1f4c8bc24280fd8afb6d", - "parent_gene": "", - "protein_md5": "d12522e698b144b338e9a7eb3c211fed", - "protein_translation": "MSATDRYSHQLLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQYNVSRITIRKAISDLVADGVLIRWQGKGTFVQSQKVENALLTVSGFTDFGVSQGKATKEKVIEQERVSAAPFCEKLNIPGNSEVFHLCRVMYLDKEPLFIDSSWIPLSRYPDFDEIYVEGSSTYQLFQERFDTRVVSDKKTIDIFAATRPQAKWLKCELGEPLFRISKIAFDQNDKPVHVSELFCRANRITLTIDNKRH", - "protein_translation_length": 243, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417835.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011035" - ], - [ - "gene_synonym", - "EcoGene:EG12914" - ], - [ - "gene_synonym", - "JW3339" - ], - [ - "gene_synonym", - "b3376" - ], - [ - "gene_synonym", - "GeneID:947884" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45545" - ], - [ - "gene_synonym", - "ECK3363" - ], - [ - "gene_synonym", - "yhfS" - ], - [ - "gene_synonym", - "GI:16131254" - ] - ], - "dna_sequence": "ATGAAGACGTTTCCTCTGCAAAGCCTGACGATTATTGAGGCGCAGCAAAAGCAGTTTGCGCTGGTGGATAGCATTTGTCGCCATTTCCCCGGCAGCGAGTTTCTTACTGGCGGTGATTTAGGCTTAACGCCAGGACTGAATCAACCGCGCGTTACCCAGCGTGTGGAACAGGTGCTGGCTGATGCATTTCACGCACAGGCTGCGGCGCTGGTGCAGGGCGCGGGGACTGGCGCGATTCGCGCCGGGCTGGCGGCTTTGCTCAAACCGGGGCAGCGTCTTCTGGTGCATGACGCGCCTGTTTACCCGACGACACGGGTTATTATTGAGCAGATGGGGCTGACGCTTATTACTGTTGATTTCAATGACCTGTCGGCACTGAAGCAGGTCGTCGACGAGCAACAACCGGATGCGGCGCTGGTGCAGCATACGCGCCAGCAGCCGCAGGACAGCTACGTGCTGGCAGATGTGCTGGCAACGTTGCGCGCGGCAGGTGTTCCAGCGTTAACCGATGACAACTATGCGGTGATGAAGGTGGCTCGAATCGGCTGTGAATGCGGCGCGAATGTCTCGACATTTTCCTGCTTCAAGCTATTTGGGCCAGAGGGTGTTGGTGCAGTGGTCGGCGATGCTGATGTTATCAACCGTATTCGCGCCACGCTTTACTCCGGCGGTAGCCAGATCCAGGGCGCACAGGCGCTGGAAGTATTGCGTGGTCTGGTGTTTGCGCCAGTGATGCACGCGGTGCAGGCAGGGGTATCTGAACGGTTGCTGGCTTTGCTTAACGGTGGTGCGGTGCCGGAAGTGAAAAGCGCGGTGATTGCTAATGCGCAGTCGAAGGTGTTGATTGTCGAGTTTCATCAGCCGATTGCCGCCAGAGTGCTGGAAGAGGCGCAAAAGCGCGGTGCCTTGCCTTACCCGGTGGGTGCAGAGTCGAAATATGAAATCCCGCCGCTCTTTTATCGCCTTTCCGGAACGTTTCGCCAGGCGAATCCACAATCAGAACATTGTGCGATTCGCATTAACCCGAATCGCAGCGGTGAAGAGACGGTGCTGCGGATTTTGCGTGAGAGTATTGCCAGTATTTAA", 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"gene_synonym", - "b3377" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45546" - ], - [ - "gene_synonym", - "ECK3364" - ], - [ - "gene_synonym", - "NP_417836.1" - ], - [ - "gene_synonym", - "GI:16131255" - ], - [ - "gene_synonym", - "yhfT" - ] - ], - "dna_sequence": "ATGGATCTGTATATTCAGATTATCGTGGTGGCGTGCCTGACGGGTATGACATCGCTTCTGGCGCATCGCTCGGCGGCTGTTTTTCATGACGGCATCCGCCCGATCCTGCCGCAACTGATTGAAGGCTATATGAACCGTCGCGAGGCGGGGAGTATCGCTTTTGGTCTGAGCATTGGTTTTGTGGCCTCGGTGGGGATCTCTTTTACCCTGAAAACCGGGCTGCTCAACGCATGGTTACTCTTTCTTCCTACCGATATCCTCGGCGTCCTGGCGATAAACAGCCTGATGGCGTTTGGTCTTGGCGCTATCTGGGGCGTGTTGATCCTTACTTGCCTGTTGCCAGTAAACCAGCTGCTGACCGCGCTGCCGGTGGATGTATTAGGTAGCCTGGGGGAATTAAGCTCGCCGGTGGTTTCAGCTTTTGCACTGTTCCCGCTGGTGGCGATTTTCTACCAGTTTGGCTGGAAGCAAAGTCTGATCGCCGCCGTGGTGGTACTGATGACCCGTGTGGTAGTCGTGCGCTATTTCCCACATCTTAACCCTGAATCCATCGAAATCTTTATTGGCATGGTGATGCTGCTGGGGATCGCGATAACTCACGACCTGCGTCATCGTGATGAAAATGACATTGATGCCAGCGGGCTTTCGGTGTTTGAAGAACGCACGTCACGGATTATCAAAAACTTACCCTATATCGCCATCGTGGGAGCATTGATTGCCGCCGTTGCCAGCATGAAGATTTTTGCTGGCAGTGAAGTGTCGATCTTCACACTGGAGAAAGCATATTCCGCAGGCGTAACGCCGGAACAATCGCAAACGCTGATTAATCAGGCGGCTCTGGCAGAATTTATGCGCGGACTGGGGTTTGTGCCGTTGATTGCCACCACCGCGTTAGCAACGGGTGTGTATGCAGTTGCGGGCTTTACCTTTGTTTATGCGGTGGACTATCTCTCGCCGAATCCGATGGTTGCAGCGGTATTAGGCGCAGTGGTTATTTCGGCGGAAGTCTTGCTGCTTCGTTCGATCGGCAAATGGCTGGGACGCTACCCGTCGGTGCGTAATGCGTCGGATAACATCCGTAACGCCATGAATATGCTGATGGAAGTGGCGCTGCTGGTCGGTTCGATTTTCGCAGCAATTAAGATGGCGGGTTATACCGGATTCTCTATCGCGGTTGCCATTTACTTCCTCAACGAATCCCTGGGCCGTCCGGTACAGAAAATGGCGGCACCGGTCGTGGCAGTAATGATCACCGGTATTCTGCTGAATGTTCTTTACTGGCTTGGCCTGTTCGTTCCGGCTTAA", 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- [ - "gene_synonym", - "NP_417837.2" - ], - [ - "gene_synonym", - "ECK3365" - ], - [ - "gene_synonym", - "JW5697" - ], - [ - "gene_synonym", - "yhfU" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64631" - ], - [ - "gene_synonym", - "ASAP:ABE-0011041" - ] - ], - "dna_sequence": "ATGAAAAAGATTGGCGTTGCAGGCTTACAGCGTGAGCAGATTAAAAAAACTATTGAAGCGACGGCTCCTGGCTGTTTTGAAGTTTTCATTCACAACGACATGGAAGCGGCAATGAAGGTGAAATCCGGGCAACTGGATTATTACATCGGCGCGTGTAATACCGGTGCGGGCGCGGCATTGTCGATTGCCATCGCGGTGATAGGCTATAACAAAAGTTGCACCATTGCCAAACCAGGCATTAAAGCGAAAGACGAGCATATCGCCAAAATGATCGCTGAAGGAAAAGTGGCGTTTGGCCTTTCCGTTGAGCACGTCGAACACGCGATTCCGATGCTGATTAACCATCTGAAATAA", - "dna_sequence_length": 354, - "functions": [ - "DUF2620 family protein" - ], - "id": "CDS_3316", - "location": [ - [ - "NC_000913", - 3507701, - "-", - 354 - ] - ], - "md5": "adf29542b3abb31e5f69988bfbd81fb2", - "parent_gene": "", - "protein_md5": "1e11ef72011f96bc70cbc16ae9f712a8", - "protein_translation": "MKKIGVAGLQREQIKKTIEATAPGCFEVFIHNDMEAAMKVKSGQLDYYIGACNTGAGAALSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSVEHVEHAIPMLINHLK", - "protein_translation_length": 117, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45548" - ], - [ - "gene_synonym", - "b3379" - ], - [ - "gene_synonym", - "EcoGene:EG12917" - ], - [ - "gene_synonym", - "GeneID:947891" - ], - [ - "gene_synonym", - "JW3342" - ], - [ - "gene_synonym", - "NP_417838.1" - ], - [ - "gene_synonym", - "ECK3366" - ], - [ - "gene_synonym", - "GI:16131257" - ], - [ - "gene_synonym", - "ASAP:ABE-0011044" - ], - [ - "gene_synonym", - "php" - ], - [ - "gene_synonym", - "yhfV" - ] - ], - "dna_sequence": "ATGAGTTTTGATCCGACGGGTTACACCCTCGCCCATGAGCATCTGCATATTGATCTCTCCGGCTTTAAAAACAACGTGGACTGCCGCCTTGATCAGTATGCGTTCATTTGCCAGGAGATGAACGACCTGATGACCCGGGGCGTGCGTAATGTGATTGAGATGACCAACCGTTACATGGGGCGCAATGCGCAATTTATGCTTGATGTAATGCGCGAGACGGGGATCAACGTGGTGGCCTGTACCGGTTATTACCAGGACGCGTTTTTCCCGGAACATGTGGCGACCCGCAGCGTGCAGGAACTGGCGCAGGAGATGGTCGATGAAATTGAACAGGGTATCGATGGCACGGAGCTGAAAGCCGGGATCATCGCGGAGATCGGCACCAGCGAAGGAAAGATTACGCCGCTGGAAGAGAAGGTATTTATTGCCGCTGCGCTGGCGCATAACCAGACCGGACGCCCGATCTCCACGCATACGTCGTTCAGCACGATGGGGCTGGAGCAACTGGCGTTGCTACAAGCCCACGGGGTTGATCTTTCGCGCGTCACCGTTGGTCACTGCGATCTGAAAGACAACCTCGACAACATTTTGAAGATGATCGATCTCGGCGCGTACGTGCAGTTCGACACCATCGGCAAGAACAGTTACTACCCGGACGAAAAGCGTATTGCGATGCTTCATGCGCTACGCGACCGTGGGTTGCTGAACCGCGTCATGCTGTCGATGGATATTACGCGCCGCTCCCATTTAAAAGCCAACGGTGGTTATGGCTATGACTATTTACTAACCACCTTTATTCCGCAATTGCGCCAGTCAGGATTCAGTCAGGCCGATGTGGATGTGATGTTACGTGAAAATCCCTCTCAATTTTTCCAATAA", - "dna_sequence_length": 879, - "functions": [ - "phosphotriesterase homology protein" - ], - "id": "CDS_3317", - "location": [ - [ - "NC_000913", - 3508590, - "-", - 879 - ] - ], - "md5": "a308bd2341eb356a5970d248dd36579b", - "parent_gene": "", - "protein_md5": "a8ef44a29f44685332f14f72e4cdc24b", - "protein_translation": "MSFDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ", - "protein_translation_length": 292, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3380" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45549" - ], - [ - "gene_synonym", - "GeneID:947890" - ], - [ - "gene_synonym", - "EcoGene:EG12918" - ], - [ - "gene_synonym", - "JW3343" - ], - [ - "gene_synonym", - "GI:16131258" - ], - [ - "gene_synonym", - "ECK3367" - ], - [ - "gene_synonym", - "ASAP:ABE-0011046" - ], - [ - "gene_synonym", - "NP_417839.1" - ], - [ - "gene_synonym", - "yhfW" - ] - ], - "dna_sequence": "ATGGCGCGATTTGTGGTGTTAGTGATTGATAGCTTTGGCGTAGGGGCAATGAAAGATGTCACGCTGGTGCGTCCGCAAGATGCGGGAGCGAATACATGTGGTCACATCCTGAGCCAGTTGCCGCATTTGCAGCTACCAACGCTGGAGACGCTGGGGCTAATCAACGCATTGGGTTATGCGCCAGGCGATATGCAGCCGTCAGATTCCGCAACCTGGGGCGTGGCAGAGCTGCAACATGAAGGTGGCGATACCTTTATGGGGCATCAGGAAATTTTAGGCACGCGCCCGTTACCGCCGCTGCGGATGCCTTTTCGCGATGTGATTGACCGTGTTGAGCAGGCATTAGTTTCCGCTGGCTGGCAGGTGGAGCGCCGTGGCGATGATCTGCAATTTCTGTGGGTCAATCAGGCGGTTGCGATTGGCGATAATCTCGAGGCGGATTTAGGCCAGGTCTATAACATTACCGCCAATCTCTCTGTGATCTCTTTTGACGACGCAATCAAAATTGGTCGTATCGTGCGTGAGCAGGTACAGGTCGGTCGGGTCATTACATTTGGTGGCCTGTTAACCGACAGTCAACGCATTCTCGATGCCGCAGAAAGCAAAGAAGGGCGCTTTATTGGTATCAATGCGCCGCGTTCTGGCGCTTATGACAACGGTTTCCAGGTCGTGCATATGGGCTATGGCGTCGATGAAAAAGTGCAGGTGCCACAAAAACTGTATGAAGCAGGCGTGCCAACCGTGCTGGTGGGTAAGGTGGCAGATATCGTCAACAATCCTTATGGCGTGAGCTGGCAAAATCTGGTGGATAGCCAGCGGATTATGGATATCACCCTCAACGAATTTAACACCCATCCGACGGCGTTTATTTGCACCAACATTCAGGAAACCGACCTCGCTGGTCATGCAGAAGACGTCGCACGTTATGCCGAACGTTTGCAGGTCGTTGACCGTAACCTTGCCCGGCTTGTTGAGGCGATGCAGCCAGATGATTGCCTGGTCGTGATGGCGGATCACGGCAACGATCCGACCATTGGTCACAGCCACCATACCCGCGAAGTGGTGCCAGTGCTGGTTTATCAGCAAGGGATGATCGCTACGCAGCTCGGTGTGCGCACCACGCTTTCTGATGTGGGGGCTACCGTGTGTGAATTTTTCCGCGCGCCACCGCCACAAAATGGTCGCTCTTTTCTTTCCTCCCTCCGGTTTGCAGGAGACACCCTATGA", - "dna_sequence_length": 1227, - "functions": [ - "phosphopentomutase-related metalloenzyme superfamily protein" - ], - "id": "CDS_3318", - "location": [ - [ - "NC_000913", - 3509813, - "-", - 1227 - ] - ], - "md5": "38546a3bcaecd2606a1f5d50ae3ab5d6", - "parent_gene": "", - "protein_md5": "7e7747d1b67a6c3ab2239cc864517c55", - "protein_translation": "MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQLPTLETLGLINALGYAPGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRMPFRDVIDRVEQALVSAGWQVERRGDDLQFLWVNQAVAIGDNLEADLGQVYNITANLSVISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYDNGFQVVHMGYGVDEKVQVPQKLYEAGVPTVLVGKVADIVNNPYGVSWQNLVDSQRIMDITLNEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLARLVEAMQPDDCLVVMADHGNDPTIGHSHHTREVVPVLVYQQGMIATQLGVRTTLSDVGATVCEFFRAPPPQNGRSFLSSLRFAGDTL", - "protein_translation_length": 408, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3381" - ], - [ - "gene_synonym", - "GeneID:947889" - ], - [ - "gene_synonym", - "NP_417840.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45550" - ], - [ - "gene_synonym", - "EcoGene:EG12919" - ], - [ - "gene_synonym", - "JW3344" - ], - [ - "gene_synonym", - "yhfX" - ], - [ - "gene_synonym", - "ASAP:ABE-0011048" - ], - [ - "gene_synonym", - "GI:16131259" - ], - [ - "gene_synonym", - "ECK3368" - ] - ], - "dna_sequence": "ATGTTTGTAGAAGCATTGAAACGCCAGAACCCGGCGCTGATTTCCGCCGCACTAAGCCTGTGGCAGCAGGGCAAGATCGCCCCGGACAGCTGGGTGATCGACGTGGATCAGATACTGGAAAACGGTAAGCGGCTGATTGAGACGGCGCGGCTTTACGGCATTGAACTGTATCTGATGACCAAGCAGTTTGGTCGTAATCCGTGGCTGGCGGAAAAATTGCTGGCATTAGGCTACAGCGGCATTGTGGCGGTGGATTACAAAGAGGCGCGAGTCATGCGCCGCGCTGGTTTGCCTGTGGCGCATCAGGGGCATCTGGTACAAATCCCTTGTCATCAGGTTGCTGACGCCGTTGAACAGGGCACCGACGTCATCACCGTGTTTACTCTCGACAAAGCGCGGGAAGTTTCTGCGGCGGCGGTGAAGGCCGGGCGAATCCAGTCTGTGCTGCTTAAAGTTTATAGCGACGATGATTTTCTTTATCCGGGCCAGGAGAGCGGTTTTGCCCTCAAGGTGTTGCCGGAGATTGTCGCCGAAATCCAGAATCTGCCAGGGCTGCATTTAGCCGGACTTACCCATTTCCCTTGCCTGCTTTGGGATGAGGCTGTCGGAAAAGTTTTGCCGACACCGAATCTTCACACGCTGATACAGGCACGGGATCAACTGGCGAAATCTGGTATTGCACTTGAGCAACTGAACGCGCCTTCAGCGACCAGCTGCACTTCGCTGCCATTACTGGCGCAATACGGTGTGACTCATGCCGAACCCGGTCATGCGCTGACGGGCACTATTCCGGCAAACCAGCAGGGCGATCAGCCTGAACGTATCGCGATGCTCTGGTTAAGTGAAATCTCCCATCATTTCCGTGGCGACAGCTACTGCTACGGCGGCGGTTACTATCGTCGTGGTCATGCGCAACATGCGTTGGTGTTTACGCCAGAAAATCAAAAGATTACTGAAACCAATCTCAAAACTGTGGATGACAGCAGTATCGACTACACCCTGCCGCTGGCAGGCGAGTTTCCGGTAAGCAGTGCAGTGGTGCTCTGTTTTCGCACGCAGATTTTTGTCACCCGTAGCGATGTGGTGCTGGTGTCCGGTATTCATCGTGGCGAACCGGAAATCGTCGGTCGTTATGACAGTCTTGGAAACTCTCTGGGGGCGTAA", - "dna_sequence_length": 1164, - "functions": [ - "putative pyridoxal 5'-phosphate binding protein" - ], - "id": "CDS_3319", - "location": [ - [ - "NC_000913", - 3510976, - "-", - 1164 - ] - ], - "md5": "d04c4faf1f2d484ff03daa10cbebc40a", - "parent_gene": "", - "protein_md5": "44274bafa774968da5ecadb8fefff603", - "protein_translation": "MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQILENGKRLIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLPVAHQGHLVQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRIQSVLLKVYSDDDFLYPGQESGFALKVLPEIVAEIQNLPGLHLAGLTHFPCLLWDEAVGKVLPTPNLHTLIQARDQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALTGTIPANQQGDQPERIAMLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTLPLAGEFPVSSAVVLCFRTQIFVTRSDVVLVSGIHRGEPEIVGRYDSLGNSLGA", - "protein_translation_length": 387, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011050" - ], - [ - "gene_synonym", - "b3382" - ], - [ - "gene_synonym", - "GeneID:947888" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45551" - ], - [ - "gene_synonym", - "GI:90111580" - ], - [ - "gene_synonym", - "JW5696" - ], - [ - "gene_synonym", - "yhfY" - ], - [ - "gene_synonym", - "NP_417841.2" - ], - [ - "gene_synonym", - "ECK3369" - ], - [ - "gene_synonym", - "EcoGene:EG12920" - ] - ], - "dna_sequence": "ATGGAAACCAGACTCAACCTGCTTTGCGAGGCAGGCGTTATTGATAAGGACATCTGCAAAGGCATGATGCAGGTCGTCAACGTACTGGAAACAGAGTGCCATCTGCCGGTGCGCAGTGAGCAAGGAACGATGGCGATGACACATATGGCGAGTGCACTGATGCGCAGTCGCCGTGGTGAAGAAATAGAGCCGCTGGATAACGAGTTGCTGGCAGAACTGGCGCAATCCAGCCACTGGCAAGCCGTTGTGCAATTGCATCAGGTGTTGTTGAAGGAATTCGCACTGGAAGTTAACCCGTGTGAAGAAGGCTATTTGCTGGCCAACCTTTATGGATTATGGATGGCTGCTAACGAAGAGGTTTGA", - "dna_sequence_length": 363, - "functions": [ - "PRD domain protein" - ], - "id": "CDS_3320", - "location": [ - [ - "NC_000913", - 3511422, - "-", - 363 - ] - ], - "md5": "2f76b63ba6ea59a3af36e3d4bda6eccf", - "parent_gene": "", - "protein_md5": "6a08bdde1ce1a7aea4f29bc619d2f285", - "protein_translation": "METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTMAMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEEGYLLANLYGLWMAANEEV", - "protein_translation_length": 120, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3383" - ], - [ - "gene_synonym", - "ASAP:ABE-0011052" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45552" - ], - [ - "gene_synonym", - "GeneID:947897" - ], - [ - "gene_synonym", - "ECK3370" - ], - [ - "gene_synonym", - "GI:49176343" - ], - [ - "gene_synonym", - "JW5948" - ], - [ - "gene_synonym", - "EcoGene:EG12921" - ], - [ - "gene_synonym", - "yhfZ" - ], - [ - "gene_synonym", - "YP_026214.1" - ] - ], - "dna_sequence": "ATGCGTCGAACGTTTATCAAAAAAGAAGGCGTCGTCATCACGACGCTGGCCCGTTATTTGTTGGGTGAAAAGTGCGGTAATCGATTGAAAACCATAGATGAGCTGGCAAATGAATGCCGTTCATCCGTTGGCCTGACGCAGGCCGCGTTGAAAACGCTGGAATCAAGCGGAGCGATACGGATTGAACGCCGTGGGCGCAATGGCAGTTATCTGGTCGAGATGGATAACAAAGCATTGCTGACTCATGTGGATATCAACAACGTGGTATGTGCAATGCCCTTGCCCTATACCCGTTTGTACGAAGGCCTGGCGAGCGGATTGAAAGCCCAGTTTGATGGCATTCCTTTTTACTATGCGCACATGCGTGGCGCGGATATTCGCGTGGAGTGTCTGCTTAATGGCGTGTATGACATGGCGGTGGTTTCGCGACTAGCGGCGGAAAGTTATCTCACGCAAAAAGGCTTATGCCTCGCGCTGGAGTTGGGGCCGCACACCTACGTTGGCGAGCACCAGTTGATTTGCCGTAAAGGCGAGTCCGCAAACGTGAAGCGCGTGGGGCTGGATAACCGTTCGGCGGATCAGAAAATCATGACCGATGTTTTTTTTGGCGGTAGTGATGTGGAACGAGTCGATCTCTCTTATCACGAGAGTTTACAACGCATTGTTAAAGGCGATGTCGATGCGGTGATCTGGAACGTGGTGGCGGAAAACGAACTGACCATGCTGGGATTAGAGGCGACGCCGCTCACAGACGATCCGCGATTTTTACAGGCCACCGAAGCCGTGGTCCTGACGCGAGTCGATGATTACCCAATGCAACAACTGCTGCGTGCCGTTGTAGATAAACACGCCCTGCTCGCCCATCAACAACGGGTAGTGAGTGGGGAACAGGAACCGAGTTATTAA", - "dna_sequence_length": 906, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_3321", - "location": [ - [ - "NC_000913", - 3512344, - "-", - 906 - ] - ], - "md5": "7ee76cf279ea8d4eb34de9dd7f6dc9f2", - "parent_gene": "", - "protein_md5": "f4f0bd0fc18755dfb4b9f1720de8b0b1", - "protein_translation": "MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELANECRSSVGLTQAALKTLESSGAIRIERRGRNGSYLVEMDNKALLTHVDINNVVCAMPLPYTRLYEGLASGLKAQFDGIPFYYAHMRGADIRVECLLNGVYDMAVVSRLAAESYLTQKGLCLALELGPHTYVGEHQLICRKGESANVKRVGLDNRSADQKIMTDVFFGGSDVERVDLSYHESLQRIVKGDVDAVIWNVVAENELTMLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLLRAVVDKHALLAHQQRVVSGEQEPSY", - "protein_translation_length": 301, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3384" - ], - [ - "gene_synonym", - "NP_417843.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011056" - ], - [ - "gene_synonym", - "EcoGene:EG11030" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00954" - ], - [ - "gene_synonym", - "JW3347" - ], - [ - "gene_synonym", - "ECK3371" - ], - [ - "gene_synonym", - "GeneID:947894" - ], - [ - "gene_synonym", - "trpS" - ], - [ - "gene_synonym", - "GI:16131262" - ] - ], - "dna_sequence": "ATGACTAAGCCCATCGTTTTTAGTGGCGCACAGCCCTCAGGTGAATTGACCATTGGTAACTACATGGGTGCGCTGCGTCAGTGGGTAAACATGCAGGATGACTACCATTGCATTTACTGTATCGTTGACCAACACGCGATCACCGTGCGCCAGGATGCACAGAAGCTGCGTAAAGCGACGCTGGATACGCTGGCCTTGTATCTGGCTTGTGGTATCGATCCTGAGAAAAGCACCATTTTTGTTCAGTCCCACGTGCCGGAACATGCACAGTTAGGCTGGGCACTGAACTGCTATACCTACTTCGGCGAACTGAGTCGCATGACGCAGTTTAAAGATAAATCTGCGCGTTATGCCGAGAACATCAACGCTGGTCTGTTTGACTATCCGGTGCTGATGGCAGCGGACATCCTGCTGTATCAAACTAATCTGGTACCGGTGGGTGAAGACCAGAAACAGCACCTCGAACTGAGCCGCGATATTGCCCAGCGTTTCAACGCGCTGTATGGCGAGATCTTTAAGGTGCCGGAGCCGTTTATTCCGAAATCTGGCGCGCGCGTAATGTCGCTGCTGGAGCCGACCAAGAAGATGTCCAAGTCTGACGATAATCGCAATAACGTTATCGGCCTGCTGGAAGATCCGAAATCGGTAGTGAAGAAAATCAAACGTGCGGTCACTGACTCCGACGAGCCGCCGGTAGTTCGCTACGATGTGCAGAACAAAGCGGGCGTTTCCAACCTGTTGGATATCCTTTCAGCGGTAACGGGCCAGAGCATCCCAGAACTGGAAAAACAGTTCGAAGGCAAGATGTATGGTCATCTGAAAGGTGAAGTGGCTGATGCCGTTTCCGGTATGCTGACTGAATTGCAGGAACGCTATCACCGTTTCCGCAACGATGAAGCCTTCCTGCAACAGGTGATGAAAGATGGCGCGGAAAAAGCCAGCGCGCACGCTTCCCGTACGCTAAAAGCGGTGTACGAAGCGATTGGTTTTGTGGCGAAGCCGTAA", - "dna_sequence_length": 1005, - "functions": [ - "tryptophanyl-tRNA synthetase" - ], - "id": "CDS_3322", - "location": [ - [ - "NC_000913", - 3513638, - "-", - 1005 - ] - ], - "md5": "6deb3ddf48e86c11a5be29bbea920c8a", - "parent_gene": "", - "protein_md5": "96efecbb175fa71e17b4badca3f602a9", - "protein_translation": "MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQHAITVRQDAQKLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFGELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDIAQRFNALYGEIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVKKIKRAVTDSDEPPVVRYDVQNKAGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGEVADAVSGMLTELQERYHRFRNDEAFLQQVMKDGAEKASAHASRTLKAVYEAIGFVAKP", - "protein_translation_length": 334, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131263" - ], - [ - "gene_synonym", - "JW3348" - ], - [ - "gene_synonym", - "b3385" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32662" - ], - [ - "gene_synonym", - "ASAP:ABE-0011058" - ], - [ - "gene_synonym", - "yhfE" - ], - [ - "gene_synonym", - "GeneID:947895" - ], - [ - "gene_synonym", - "ECK3372" - ], - [ - "gene_synonym", - "NP_417844.1" - ], - [ - "gene_synonym", - "gph" - ], - [ - "gene_synonym", - "EcoGene:EG11871" - ] - ], - "dna_sequence": "ATGAATAAGTTTGAAGATATTCGCGGCGTCGCTTTTGATCTTGATGGTACGCTGGTCGACAGTGCTCCTGGTCTTGCTGCTGCGGTAGATATGGCGCTGTATGCGCTGGAGTTGCCCGTCGCAGGTGAAGAACGCGTTATTACCTGGATTGGTAACGGCGCAGATGTTCTGATGGAGCGCGCATTGACCTGGGCGCGTCAGGAACGTGCGACTCAGCGTAAAACAATGGGTAAACCGCCCGTTGATGACGACATTCCGGCAGAAGAACAGGTACGTATTCTGCGTAAACTGTTCGATCGCTACTATGGCGAGGTTGCCGAAGAGGGGACGTTTTTGTTCCCGCACGTTGCCGATACGTTGGGCGCGTTGCAGGCTAAAGGCCTGCCGCTAGGCCTGGTCACCAACAAACCGACGCCGTTCGTCGCGCCGCTGCTCGAAGCCTTAGATATCGCCAAATACTTCAGCGTGGTGATTGGTGGTGATGATGTGCAAAACAAAAAACCGCATCCGGACCCGCTGTTACTGGTGGCTGAGCGGATGGGAATTGCCCCACAACAGATGCTGTTTGTCGGCGACTCACGCAATGATATTCAGGCGGCAAAAGCGGCAGGTTGCCCATCAGTTGGCTTAACCTACGGATATAACTACGGCGAGGCTATCGATCTCAGCCAGCCTGATGTAATTTATCAGTCTATAAATGACCTTCTGCCCGCATTAGGGCTTCCGCATAGCGAAAATCAGGAATCGAAAAATGACTAA", - "dna_sequence_length": 759, - "functions": [ - "phosphoglycolate phosphatase" - ], - "id": "CDS_3323", - "location": [ - [ - "NC_000913", - 3514389, - "-", - 759 - ] - ], - "md5": "915f157a0db9b01d07cc68ca4d1b08ee", - "parent_gene": "", - "protein_md5": "ef67ea99c525d497a3fe15ec7457e0af", - "protein_translation": "MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEERVITWIGNGADVLMERALTWARQERATQRKTMGKPPVDDDIPAEEQVRILRKLFDRYYGEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGEAIDLSQPDVIYQSINDLLPALGLPHSENQESKND", - "protein_translation_length": 252, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3349" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG07" - ], - [ - "gene_synonym", - "GI:16131264" - ], - [ - "gene_synonym", - "EcoGene:EG11960" - ], - [ - "gene_synonym", - "b3386" - ], - [ - "gene_synonym", - "NP_417845.1" - ], - [ - "gene_synonym", - "GeneID:947896" - ], - [ - "gene_synonym", - "yhfD" - ], - [ - "gene_synonym", - "dod" - ], - [ - "gene_synonym", - "ECK3373" - ], - [ - "gene_synonym", - "rpe" - ], - [ - "gene_synonym", - "ASAP:ABE-0011061" - ] - ], - "dna_sequence": "ATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTGCCCGCCTGGGTGAAGATACCGCAAAAGCCCTGGCAGCTGGCGCTGATGTCGTGCATTTTGACGTCATGGATAACCACTATGTTCCCAATCTGACGATTGGGCCAATGGTGCTGAAATCCTTGCGTAACTATGGCATTACCGCCCCTATCGACGTACACCTGATGGTGAAACCCGTCGATCGCATTGTGCCTGATTTCGCTGCCGCTGGTGCCAGCATCATTACCTTTCATCCAGAAGCCTCCGAGCATGTTGACCGCACGCTGCAACTGATTAAAGAAAATGGCTGTAAAGCGGGTCTGGTATTTAACCCGGCGACACCTCTGAGCTATCTGGATTACGTGATGGATAAGCTGGATGTGATCCTGCTGATGTCCGTCAACCCTGGTTTCGGCGGTCAGTCTTTCATTCCTCAAACACTGGATAAACTGCGCGAAGTACGTCGCCGTATCGACGAGTCTGGCTTTGACATTCGACTAGAAGTGGACGGTGGCGTGAAGGTGAACAACATTGGCGAAATCGCTGCGGCGGGCGCGGATATGTTCGTCGCCGGTTCGGCAATCTTCGACCAGCCAGACTACAAAAAAGTCATTGATGAAATGCGCAGTGAACTGGCAAAGGTAAGTCATGAATAA", - "dna_sequence_length": 678, - "functions": [ - "D-ribulose-5-phosphate 3-epimerase" - ], - "id": "CDS_3324", - "location": [ - [ - "NC_000913", - 3515059, - "-", - 678 - ] - ], - "md5": "9a9e1e17fbf2f0a7c4386e12c58c3716", - "parent_gene": "", - "protein_md5": "ad64cec4eb7f19a532f05cb4e3f501d8", - "protein_translation": "MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLREVRRRIDESGFDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSELAKVSHE", - "protein_translation_length": 225, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEE8" - ], - [ - "gene_synonym", - "GI:16131265" - ], - [ - "gene_synonym", - "b3387" - ], - [ - "gene_synonym", - "NP_417846.1" - ], - [ - "gene_synonym", - "dam" - ], - [ - "gene_synonym", - "JW3350" - ], - [ - "gene_synonym", - "EcoGene:EG10204" - ], - [ - "gene_synonym", - "GeneID:947893" - ], - [ - "gene_synonym", - "ECK3374" - ], - [ - "gene_synonym", - "ASAP:ABE-0011063" - ] - ], - "dna_sequence": "ATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACGGCATTTGCCCAAGGGCGAATGTCTGGTTGAGCCTTTTGTAGGTGCCGGGTCGGTGTTTCTCAACACCGACTTTTCTCGTTATATCCTTGCCGATATCAATAGCGACCTGATCAGTCTCTATAACATTGTGAAGATGCGTACTGATGAGTACGTACAGGCCGCACGCGAGCTGTTTGTTCCCGAAACAAATTGCGCCGAGGTTTACTATCAGTTCCGCGAAGAGTTCAACAAAAGCCAGGATCCGTTCCGTCGGGCGGTACTGTTTTTATATTTGAACCGCTACGGTTACAACGGCCTGTGTCGTTACAATCTGCGCGGTGAGTTTAACGTGCCGTTCGGCCGCTACAAAAAACCCTATTTCCCGGAAGCAGAGTTGTATCACTTCGCTGAAAAAGCGCAGAATGCCTTTTTCTATTGTGAGTCTTACGCCGATAGCATGGCGCGCGCAGATGATGCATCCGTCGTCTATTGCGATCCGCCTTATGCACCGCTGTCTGCGACCGCCAACTTTACGGCGTATCACACAAACAGTTTTACGCTTGAACAACAAGCGCATCTGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTGCTGATCTCCAATCACGATACGATGTTAACGCGTGAGTGGTATCAGCGCGCAAAATTGCATGTCGTCAAAGTTCGACGCAGTATAAGCAGCAACGGCGGCACACGTAAAAAGGTGGACGAACTGCTGGCTTTGTACAAACCAGGAGTCGTTTCACCCGCGAAAAAATAA", - "dna_sequence_length": 837, - "functions": [ - "DNA adenine methyltransferase" - ], - "id": "CDS_3325", - "location": [ - [ - "NC_000913", - 3515913, - "-", - 837 - ] - ], - "md5": "7cf6f8730736011e765cb1032bc7caff", - "parent_gene": "", - "protein_md5": "9d29e4d27cde298dc7ac3ca3090bf9f1", - "protein_translation": "MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLNTDFSRYILADINSDLISLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQDPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFFYCESYADSMARADDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVERHIPVLISNHDTMLTREWYQRAKLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPAKK", - "protein_translation_length": 278, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131266" - ], - [ - "gene_synonym", - "damX" - ], - [ - "gene_synonym", - "yhfB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11557" - ], - [ - "gene_synonym", - "GeneID:947930" - ], - [ - "gene_synonym", - "b3388" - ], - [ - "gene_synonym", - "JW3351" - ], - [ - "gene_synonym", - "EcoGene:EG11183" - ], - [ - "gene_synonym", - "ECK3375" - ], - [ - "gene_synonym", - "NP_417847.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011065" - ] - ], - "dna_sequence": "ATGGATGAATTCAAACCAGAAGACGAGCTGAAACCCGATCCCAGCGATCGTCGTACTGGTCGTTCTCGTCAATCTTCTGAACGTTCTGAGCGTACTGAACGTGGCGAACCGCAGATCAATTTTGATGATATTGAACTTGATGACACTGACGATCGCCGTCCGACTCGTGCGCAAAAAGAGCGCAATGAGGAACCGGAAATCGAAGAAGAAATTGACGAATCCGAAGATGAAACCGTGGATGAAGAGCGCGTAGAGCGTCGTCCGCGTAAGCGCAAAAAAGCAGCCAGTAAACCCGCTTCTCGTCAGTATATGATGATGGGCGTCGGCATTCTGGTTCTACTGCTGTTGATCATCGGTATCGGTTCTGCGCTAAAAGCCCCCTCGACCACTTCCAGCGATCAAACCGCGTCTGGCGAGAAGAGTATTGATCTTGCTGGCAATGCGACCGATCAGGCGAATGGCGTGCAGCCAGCGCCGGGAACCACGTCTGCGGAAAATACTCAGCAGGATGTTTCTCTGCCACCGATCTCTTCTACGCCGACTCAAGGGCAAACCCCGGTGGCAACGGATGGTCAACAACGTGTTGAAGTGCAGGGTGACCTGAACAATGCGCTGACCCAGCCACAAAATCAGCAACAGCTGAACAATGTGGCGGTCAATTCCACGTTGCCGACTGAACCCGCAACGGTTGCGCCTGTTCGCAATGGCAATGCATCGCGTGACACGGCGAAAACGCAAACCGCTGAACGTCCGTCCACTACGCGCCCAGCTCGTCAGCAGGCGGTGATTGAACCGAAAAAACCGCAAGCAACCGTGAAAACGGAGCCGAAGCCGGTAGCACAGACGCCGAAGCGTACTGAACCAGCTGCCCCTGTGGCGAGCACGAAGGCACCGGCTGCGACTTCTACGCCAGCACCAAAAGAGACGGCGACTACGGCTCCAGTACAGACGGCATCCCCGGCGCAAACCACAGCAACACCCGCTGCTGGGGCGAAGACCGCAGGTAATGTTGGTTCGTTGAAATCGGCACCGTCCAGCCATTACACTCTGCAGCTGAGCAGTTCCTCTAACTACGACAACCTGAACGGTTGGGCGAAGAAAGAGAATCTGAAAAACTACGTTGTCTATGAAACGACGCGTAATGGTCAGCCGTGGTATGTCCTGGTTTCTGGCGTGTACGCTTCGAAAGAAGAGGCGAAAAAAGCGGTATCTACATTGCCAGCAGATGTCCAGGCCAAAAACCCGTGGGCGAAACCGCTGCGTCAGGTACAGGCCGATCTGAAGTAA", - "dna_sequence_length": 1287, - "functions": [ - "cell division protein that binds to the septal ring" - ], - "id": "CDS_3326", - "location": [ - [ - "NC_000913", - 3517306, - "-", - 1287 - ] - ], - "md5": "a8f406492b51dd02c1fb60718b786360", - "parent_gene": "", - "protein_md5": "b4e24f47ea8dd6b1589dddecec02e9b2", - "protein_translation": "MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDIELDDTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQYMMMGVGILVLLLLIIGIGSALKAPSTTSSDQTASGEKSIDLAGNATDQANGVQPAPGTTSAENTQQDVSLPPISSTPTQGQTPVATDGQQRVEVQGDLNNALTQPQNQQQLNNVAVNSTLPTEPATVAPVRNGNASRDTAKTQTAERPSTTRPARQQAVIEPKKPQATVKTEPKPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGAKTAGNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGVYASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK", - "protein_translation_length": 428, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131267" - ], - [ - "gene_synonym", - "EcoGene:EG10074" - ], - [ - "gene_synonym", - "b3389" - ], - [ - "gene_synonym", - "NP_417848.1" - ], - [ - "gene_synonym", - "JW3352" - ], - [ - "gene_synonym", - "aroB" - ], - [ - "gene_synonym", - "GeneID:947927" - ], - [ - "gene_synonym", - "ECK3376" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07639" - ], - [ - "gene_synonym", - "ASAP:ABE-0011067" - ] - ], - "dna_sequence": "ATGGAGAGGATTGTCGTTACTCTCGGGGAACGTAGTTACCCAATTACCATCGCATCTGGTTTGTTTAATGAACCAGCTTCATTCTTACCGCTGAAATCGGGCGAGCAGGTCATGTTGGTCACCAACGAAACCCTGGCTCCTCTGTATCTCGATAAGGTCCGCGGCGTACTTGAACAGGCGGGTGTTAACGTCGATAGCGTTATCCTCCCTGACGGCGAGCAGTATAAAAGCCTGGCTGTACTCGATACCGTCTTTACGGCGTTGTTACAAAAACCGCATGGTCGCGATACTACGCTGGTGGCGCTTGGCGGCGGCGTAGTGGGCGATCTGACCGGCTTCGCGGCGGCGAGTTATCAGCGCGGTGTCCGTTTCATTCAAGTCCCGACGACGTTACTGTCGCAGGTCGATTCCTCCGTTGGCGGCAAAACTGCGGTCAACCATCCCCTCGGTAAAAACATGATTGGCGCGTTCTACCAACCTGCTTCAGTGGTGGTGGATCTCGACTGTCTGAAAACGCTTCCCCCGCGTGAGTTAGCGTCGGGGCTGGCAGAAGTCATCAAATACGGCATTATTCTTGACGGTGCGTTTTTTAACTGGCTGGAAGAGAATCTGGATGCGTTGTTGCGTCTGGACGGTCCGGCAATGGCGTACTGTATTCGCCGTTGTTGTGAACTGAAGGCAGAAGTTGTCGCCGCCGACGAGCGCGAAACCGGGTTACGTGCTTTACTGAATCTGGGACACACCTTTGGTCATGCCATTGAAGCTGAAATGGGGTATGGCAATTGGTTACATGGTGAAGCGGTCGCTGCGGGTATGGTGATGGCGGCGCGGACGTCGGAACGTCTCGGGCAGTTTAGTTCTGCCGAAACGCAGCGTATTATAACCCTGCTCAAGCGGGCTGGGTTACCGGTCAATGGGCCGCGCGAAATGTCCGCGCAGGCGTATTTACCGCATATGCTGCGTGACAAGAAAGTCCTTGCGGGAGAGATGCGCTTAATTCTTCCGTTGGCAATTGGTAAGAGTGAAGTTCGCAGCGGCGTTTCGCACGAGCTTGTTCTTAACGCCATTGCCGATTGTCAATCAGCGTAA", - "dna_sequence_length": 1089, - "functions": [ - "3-dehydroquinate synthase" - ], - "id": "CDS_3327", - "location": [ - [ - "NC_000913", - 3518486, - "-", - 1089 - ] - ], - "md5": "493560571773d2cc25c1e7a94bc72e67", - "parent_gene": "", - "protein_md5": "ef90ba8d7bb1086d2c406e3764fb4b2d", - "protein_translation": "MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNETLAPLYLDKVRGVLEQAGVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVALGGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVVDLDCLKTLPPRELASGLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYCIRRCCELKAEVVAADERETGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAARTSERLGQFSSAETQRIITLLKRAGLPVNGPREMSAQAYLPHMLRDKKVLAGEMRLILPLAIGKSEVRSGVSHELVLNAIADCQSA", - "protein_translation_length": 362, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3390" - ], - [ - "gene_synonym", - "GeneID:2847759" - ], - [ - "gene_synonym", - "ASAP:ABE-0011069" - ], - [ - "gene_synonym", - "EcoGene:EG10081" - ], - [ - "gene_synonym", - "GI:90111581" - ], - [ - "gene_synonym", - "YP_026215.2" - ], - [ - "gene_synonym", - "ECK3377" - ], - [ - "gene_synonym", - "JW5947" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6D7" - ], - [ - "gene_synonym", - "aroK" - ] - ], - "dna_sequence": "ATGGCAGAGAAACGCAATATCTTTCTGGTTGGGCCTATGGGTGCCGGAAAAAGCACTATTGGGCGCCAGTTAGCTCAACAACTCAATATGGAATTTTACGATTCCGATCAAGAGATTGAGAAACGAACCGGAGCTGATGTGGGCTGGGTTTTCGATTTAGAAGGCGAAGAAGGCTTCCGCGATCGCGAAGAAAAGGTCATCAATGAGTTGACCGAGAAACAGGGTATTGTGCTGGCTACTGGCGGCGGCTCTGTGAAATCCCGTGAAACGCGTAACCGTCTTTCCGCTCGTGGCGTTGTCGTTTATCTTGAAACGACCATCGAAAAGCAACTTGCACGCACGCAGCGTGATAAAAAACGCCCGTTGCTGCACGTTGAAACACCGCCGCGTGAAGTTCTGGAAGCGTTGGCCAATGAACGCAATCCGCTGTATGAAGAGATTGCCGACGTGACCATTCGTACTGATGATCAAAGCGCTAAAGTGGTTGCAAACCAGATTATTCACATGCTGGAAAGCAACTAA", - "dna_sequence_length": 522, - "functions": [ - "shikimate kinase I" - ], - "id": "CDS_3328", - "location": [ - [ - "NC_000913", - 3519064, - "-", - 522 - ] - ], - "md5": "2f02e69c196caeac668f77a56135ac5e", - "parent_gene": "", - "protein_md5": "dee49c32c984d17a3904a2dc6dbfef34", - "protein_translation": "MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN", - "protein_translation_length": 173, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P34749" - ], - [ - "gene_synonym", - "b3391" - ], - [ - "gene_synonym", - "hopQ" - ], - [ - "gene_synonym", - "EcoGene:EG12113" - ], - [ - "gene_synonym", - "JW3354" - ], - [ - "gene_synonym", - "GI:16131268" - ], - [ - "gene_synonym", - "GeneID:947901" - ], - [ - "gene_synonym", - "NP_417850.1" - ], - [ - "gene_synonym", - "ECK3378" - ], - [ - "gene_synonym", - "hofQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0011071" - ] - ], - "dna_sequence": "ATGAAGCAATGGATAGCCGCACTACTGTTGATGCTGATACCCGGCGTACAGGCGGCAAAGCCGCAAAAAGTGACGCTGATGGTGGATGACGTTCCGGTAGCTCAGGTGTTGCAGGCGCTGGCTGAACAGGAGAAGTTGAACCTGGTCGTGTCGCCAGACGTCAGCGGTACGGTGTCGTTACATCTAACAGATGTTCCCTGGAAGCAGGCACTACAAACTGTAGTGAAAAGCGCCGGACTGATAACGCGGCAGGAAGGCAACATTCTCTCAGTGCATTCCATTGCCTGGCAGAATAACAATATCGCCCGCCAGGAGGCGGAGCAGGCGCGGGCGCAGGCAAATCTGCCGCTGGAAAATCGCAGTATAACCCTGCAATACGCCGACGCGGGAGAACTGGCGAAAGCGGGGGAGAAGCTACTGAGTGCCAAAGGGAGTATGACCGTCGATAAACGCACCAATCGCCTTTTGCTACGAGATAACAAAACGGCGTTAAGCGCGCTTGAACAGTGGGTAGCGCAAATGGATCTGCCGGTCGGGCAGGTTGAGCTGTCGGCGCATATTGTCACCATTAATGAAAAAAGTTTGCGTGAGTTAGGCGTGAAATGGACGCTGGCCGATGCGCAACACGCTGGTGGCGTTGGGCAAGTCACCACGCTTGGTAGCGACCTCTCCGTAGCGACGGCGACAACGCATGTCGGTTTTAACATTGGGCGCATCAACGGACGCTTGCTGGATCTTGAGCTTTCCGCGCTCGAACAAAAACAGCAGCTGGATATTATCGCCAGTCCGCGTCTGCTGGCCTCACATCTTCAGCCTGCCAGCATTAAACAGGGGAGCGAAATTCCATATCAGGTTTCCAGCGGGGAAAGTGGCGCGACGTCGGTGGAATTTAAAGAGGCCGTCCTGGGGATGGAGGTCACGCCCACGGTGTTACAAAAAGGTCGCATCCGGCTGAAATTACACATCAGCCAGAACGTTCCGGGGCAGGTGCTACAGCAGGCCGATGGCGAAGTGCTGGCGATTGATAAGCAGGAGATCGAAACGCAGGTCGAGGTCAAAAGCGGAGAAACGTTGGCGCTGGGCGGCATTTTTACCCGTAAAAATAAATCGGGTCAGGATAGCGTACCGTTGCTTGGCGACATTCCCTGGTTCGGGCAATTATTTCGTCATGACGGAAAAGAAGATGAACGACGCGAGTTAGTGGTGTTTATCACGCCACGACTGGTTTCCAGTGAGTAA", 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"GI:90111582" - ], - [ - "gene_synonym", - "yrfA" - ], - [ - "gene_synonym", - "GeneID:947900" - ], - [ - "gene_synonym", - "JW5694" - ], - [ - "gene_synonym", - "ASAP:ABE-0011073" - ], - [ - "gene_synonym", - "ECK3379" - ], - [ - "gene_synonym", - "hofP" - ], - [ - "gene_synonym", - "EcoGene:EG12922" - ] - ], - "dna_sequence": "ATGAGGGTTAAACGCTGGTTGTTGGCAGGTATTGCATTGTGCCTTTTAACCGGTATGCGTGACCCTTTTAAACCGCCGGAAGATCTATGCCGGATTAGCGAACTTAGCCAGTGGCGCTATCAGGGGATGGTAGGGCGAGGCGAGCGCATCATCGGTGTAATAAAAGACGGGCAAAAGAAATGGCGACGGGTGCAGCAAAACGATGTGCTGGAAAACGGCTGGACAATTTTACAGCTGACGCCAGACGTACTAACGCTGGGTACCGGGACAAACTGCGAACCGCCACAATGGTTGTGGCAACGGCAAGGAGATACAAATGAAGCAATGGATAGCCGCACTACTGTTGATGCTGATACCCGGCGTACAGGCGGCAAAGCCGCAAAAAGTGACGCTGATGGTGGATGA", - "dna_sequence_length": 405, - "functions": [ - "DNA catabolic protein" - ], - "id": "CDS_3330", - "location": [ - [ - "NC_000913", - 3521019, - "-", - 405 - ] - ], - "md5": "4b8044aba2c0d96277861463d74d506c", - "parent_gene": "", - "protein_md5": "86f73b1fba638fb86a227b2c13d9130b", - "protein_translation": "MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMVGRGERIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQGDTNEAMDSRTTVDADTRRTGGKAAKSDADGG", - "protein_translation_length": 134, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3393" - ], - [ - "gene_synonym", - "hofO" - ], - [ - "gene_synonym", - "GeneID:947899" - ], - [ - "gene_synonym", - "GI:16131270" - ], - [ - "gene_synonym", - "EcoGene:EG12923" - ], - [ - "gene_synonym", - "yrfB" - ], - [ - "gene_synonym", - "NP_417852.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45751" - ], - [ - "gene_synonym", - "JW3356" - ], - [ - "gene_synonym", - "ASAP:ABE-0011075" - ], - [ - "gene_synonym", - "ECK3380" - ] - ], - "dna_sequence": "ATGAACATGTTCTTTGACTGGTGGTTCGCCACATCACCCCGCCTCCGCCAGCTTTGCTGGGCATTCTGGTTGCTGATGTTAGTTACGCTCATTTTTCTGTCATCGACACACCATGAAGAGCGCGACGCATTAATTCGACTACGGGCAAGTCATCACCAGCAGTGGGCCGCACTGTATCGCCTGGTAGACACCGCTCCCTTCAGCGAGGAAAAAACGCTGCCCTTTTCGCCACTGGATTTTCAGTTATCCGGCGCGCAACTGGTTTCCTGGCATCCATCCGCGCAGGGAGGCGAGTTGGCGTTGAAAACGCTGTGGGAAGCAGTGCCGTCGGCATTTACACGGCTGGCAGAGCGCAACGTCAGCGTGAGCCGTTTTTCGTTAAGCGTGGAAGGTGATGATCTTTTGTTCACGCTACAACTGGAGACGCCGCATGAGGGTTAA", - "dna_sequence_length": 441, - "functions": [ - "DNA catabolic protein" - ], - "id": "CDS_3331", - "location": [ - [ - "NC_000913", - 3521449, - "-", - 441 - ] - ], - "md5": "c9c27e412c09b4176ce13b5acf2d976b", - "parent_gene": "", - "protein_md5": "e96dd3d4a0a611128fc1f6167f9b8534", - "protein_translation": "MNMFFDWWFATSPRLRQLCWAFWLLMLVTLIFLSSTHHEERDALIRLRASHHQQWAALYRLVDTAPFSEEKTLPFSPLDFQLSGAQLVSWHPSAQGGELALKTLWEAVPSAFTRLAERNVSVSRFSLSVEGDDLLFTLQLETPHEG", - "protein_translation_length": 146, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yrfC" - ], - [ - "gene_synonym", - "GeneID:947898" - ], - [ - "gene_synonym", - "hofN" - ], - [ - "gene_synonym", - "GI:16131271" - ], - [ - "gene_synonym", - "b3394" - ], - [ - "gene_synonym", - "JW3357" - ], - [ - "gene_synonym", - "NP_417853.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64634" - ], - [ - "gene_synonym", - "EcoGene:EG12924" - ], - [ - "gene_synonym", - "ASAP:ABE-0011077" - ], - [ - "gene_synonym", - "ECK3381" - ] - ], - "dna_sequence": 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"MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTGSAEARIDAVLLQAEQQLARSLQITKPRLLEQQQLREQRSQRQRQRQFTRDWQSALEALAALLPEHAWLTTISWQQGTLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQGRWQFEYQLTRKVSDEHVL", - "protein_translation_length": 179, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hofM" - ], - [ - "gene_synonym", - "NP_417854.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45753" - ], - [ - "gene_synonym", - "yrfD" - ], - [ - "gene_synonym", - "GI:90111583" - ], - [ - "gene_synonym", - "b3395" - ], - [ - "gene_synonym", - "ASAP:ABE-0011079" - ], - [ - "gene_synonym", - "GeneID:947908" - ], - [ - "gene_synonym", - "JW5693" - ], - [ - "gene_synonym", - "EcoGene:EG12925" - ], - [ - "gene_synonym", - "ECK3382" - ] - ], - "dna_sequence": "ATGGCATTTAAGATCTGGCAAATTGGTTTGCATTTACAACAGCAAGAAGCGGTAGCGGTTGCGATCGTGCGGGGCGCAAAAGAATGCTTTTTGCAACGCTGGTGGCGGTTGCCGCTGGAGAACGACATTATCAAAGATGGGCGGATTGTTGATGCGCAGCAGCTGGCTAAAACGTTGTTACCGTGGAGTCGCGAACTGCCGCAGCGTCATCACATTATGTTGGCGTTTCCCGCCAGTCGCACATTACAGCGGTCATTTCCGCGCCCGTCGATGTCCCTTGGTGAGCGGGAGCAAACGGCCTGGCTGTCAGGGACGATGGCCCGCGAGCTGGATATGGATCCGGACTCCCTGCGCTTCGATTACAGCGAAGACTCACTCAGTCCCGCCTATAACGTGACTGCCGCGCAAAGCAAAGAGCTGGCAACGCTGCTTACTCTGGCAGAAAGGTTGCGTGTTCATGTGAGCGCGATCACCCCGGATGCCAGTGCATTACAGCGATTCCTGCCTTTTTTACCTTCTCATCAGCAATGTCTGGCCTGGCGTGATAACGAACAGTGGCTGTGGGCGACGCGCTATAGCTGGGGGCGCAAACTGGCGGTGGGGATGACTAGCGCGAAGGAGCTGGCGGCAGCGTTATCCGTTGATCCCGAAAGCGTCGCGATATGTGGCGAAGGCGGATTTGATCCCTGGGAGGCCGTTTCTGTTCGTCAGCCGCCGCTACCGCCGCCAGGTGGAGACTTTGCCATCGCGCTGGGGCTGGCGCTTGGGAAGGCGTACTGA", - "dna_sequence_length": 780, - "functions": [ - "DNA catabolic putative pilus assembly protein" - ], - "id": "CDS_3333", - "location": [ - [ - "NC_000913", - 3522751, - "-", - 780 - ] - ], - "md5": "9ae456c9e036ae1a2ceea2dcafefe2d8", - "parent_gene": "", - "protein_md5": "97f5eef863ffe960d3e1542d8ec96b7f", - "protein_translation": "MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDIIKDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWLSGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPDASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALSVDPESVAICGEGGFDPWEAVSVRQPPLPPPGGDFAIALGLALGKAY", - "protein_translation_length": 259, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3359" - ], - [ - "gene_synonym", - "b3396" - ], - [ - "gene_synonym", - "NP_417855.4" - ], - [ - "gene_synonym", - "GI:162135911" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02918" - ], - [ - "gene_synonym", - "ASAP:ABE-0011082" - ], - [ - "gene_synonym", - "mrcA" - ], - [ - "gene_synonym", - "EcoGene:EG10748" - ], - [ - "gene_synonym", - "ponA" - ], - [ - "gene_synonym", - "ECK3383" - ], - [ - "gene_synonym", - "GeneID:947907" - ] - ], - "dna_sequence": "GTGAAGTTCGTAAAGTATTTTTTGATCCTTGCAGTCTGTTGCATTCTGCTGGGAGCAGGCTCGATTTATGGCCTATACCGCTACATCGAGCCACAACTGCCGGATGTGGCGACATTAAAAGATGTTCGCCTGCAAATTCCGATGCAGATTTACAGCGCCGATGGCGAGCTGATTGCTCAATACGGTGAGAAACGTCGTATTCCGGTTACGTTGGATCAAATCCCACCGGAGATGGTGAAAGCCTTTATCGCGACAGAAGACAGCCGCTTCTACGAGCATCACGGCGTTGACCCGGTGGGGATCTTCCGTGCAGCAAGCGTGGCGCTGTTCTCCGGTCACGCGTCACAAGGGGCAAGTACCATTACCCAGCAGCTGGCGAGAAACTTCTTCCTCAGTCCAGAACGCACGCTGATGCGTAAGATTAAGGAAGTCTTCCTCGCGATTCGCATTGAACAGCTGCTGACGAAAGACGAGATCCTCGAGCTTTATCTGAACAAGATTTACCTTGGTTACCGCGCCTATGGTGTCGGTGCTGCGGCACAAGTCTATTTCGGAAAAACGGTCGACCAACTGACGCTGAACGAAATGGCGGTGATAGCCGGGCTGCCGAAAGCGCCTTCCACCTTCAACCCGCTCTACTCGATGGATCGTGCCGTCGCGCGGCGTAACGTCGTGCTGTCGCGGATGCTGGATGAAGGGTATATCACCCAACAACAGTTCGATCAGACACGCACTGAGGCGATTAACGCTAACTATCACGCGCCGGAGATTGCTTTCTCTGCGCCGTACCTGAGCGAAATGGTGCGCCAGGAGATGTATAACCGTTATGGCGAAAGTGCCTATGAAGACGGTTATCGCATTTACACCACCATCACCCGCAAAGTGCAGCAGGCCGCGCAGCAGGCGGTACGTAATAACGTGCTGGACTACGACATGCGCCACGGCTATCGCGGCCCGGCAAATGTGCTGTGGAAAGTGGGCGAGTCGGCGTGGGATAACAACAAGATTACCGATACGCTGAAGGCGCTGCCAACCTATGGTCCGCTGCTGCCTGCCGCAGTCACCAGCGCCAATCCTCAGCAAGCGACGGCGATGCTGGCGGACGGGTCGACCGTCGCATTGAGTATGGAAGGCGTTCGCTGGGCGCGTCCTTACCGTTCGGATACTCAGCAAGGACCGACGCCGCGTAAAGTGACCGATGTTCTGCAAACGGGTCAGCAAATCTGGGTTCGTCAGGTTGGCGATGCATGGTGGCTGGCACAAGTGCCGGAAGTGAACTCGGCGCTGGTGTCGATCAATCCGCAAAACGGTGCCGTTATGGCGCTGGTCGGTGGCTTTGATTTCAATCAGAGCAAGTTTAACCGCGCCACCCAGGCACTGCGTCAGGTGGGTTCCAACATCAAACCGTTCCTCTACACCGCGGCGATGGATAAAGGTCTGACGCTGGCAAGTATGTTGAACGATGTGCCAATTTCTCGCTGGGATGCAAGTGCCGGTTCTGACTGGCAGCCGAAGAACTCACCACCGCAGTATGCTGGTCCAATTCGCTTACGTCAGGGGCTGGGTCAGTCGAAAAACGTGGTGATGGTACGCGCAATGCGGGCGATGGGCGTCGACTACGCTGCAGAATATCTGCAACGCTTCGGCTTCCCGGCACAAAACATTGTCCACACCGAATCGCTGGCGCTGGGTTCAGCGTCCTTCACCCCAATGCAGGTGGCGCGCGGCTACGCGGTCATGGCGAACGGCGGCTTCCTGGTGGACCCGTGGTTTATCAGCAAAATTGAAAACGATCAGGGCGGCGTGATTTTCGAAGCGAAACCGAAAGTAGCCTGCCCGGAATGCGATATTCCGGTGATTTACGGTGATACGCAGAAATCGAACGTGCTGGAAAATAACGATGTTGAAGATGTCGCTATCTCCCGCGAGCAGCAGAATGTTTCTGTACCAATGCCGCAGCTGGAGCAGGCAAATCAGGCGTTAGTGGCGAAGACTGGCGCGCAGGAGTACGCACCGCACGTCATCAACACTCCGCTGGCATTCCTGATTAAGAGTGCTTTGAACACCAATATCTTTGGTGAGCCAGGCTGGCAGGGTACTGGCTGGCGTGCAGGTCGTGATTTGCAGCGTCGCGATATCGGCGGGAAAACCGGGACCACTAACAGTTCGAAAGATGCGTGGTTCTCGGGTTACGGTCCGGGCGTTGTGACCTCGGTCTGGATTGGCTTTGATGATCACCGTCGTAATCTCGGTCATACAACGGCTTCCGGAGCGATTAAAGATCAGATCTCAGGTTACGAAGGCGGTGCCAAGAGTGCCCAGCCTGCATGGGACGCTTATATGAAAGCCGTTCTTGAAGGTGTGCCGGAGCAGCCGCTGACGCCGCCACCGGGTATTGTGACGGTGAATATCGATCGCAGCACCGGGCAGTTAGCTAATGGTGGCAACAGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGA", 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"MKFVKYFLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRLQIPMQIYSADGELIAQYGEKRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIFRAASVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEILELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRAVARRNVVLSRMLDEGYITQQQFDQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRYGESAYEDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNNKITDTLKALPTYGPLLPAAVTSANPQQATAMLADGSTVALSMEGVRWARPYRSDTQQGPTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEVNSALVSINPQNGAVMALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDASAGSDWQPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSASFTPMQVARGYAVMANGGFLVDPWFISKIENDQGGVIFEAKPKVACPECDIPVIYGDTQKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQALVAKTGAQEYAPHVINTPLAFLIKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVWIGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTPPPGIVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGEAQELF", - "protein_translation_length": 850, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131274" - ], - [ - "gene_synonym", - "b3397" - ], - [ - "gene_synonym", - "yrfE" - ], - [ - "gene_synonym", - "nudE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45799" - ], - [ - "gene_synonym", - "JW3360" - ], - [ - "gene_synonym", - "NP_417856.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011086" - ], - [ - "gene_synonym", - "ECK3384" - ], - [ - "gene_synonym", - "EcoGene:EG12926" - ], - [ - "gene_synonym", - "GeneID:947906" - ] - ], - "dna_sequence": "ATGAGCAAATCATTACAAAAACCCACCATTCTGAATGTTGAAACTGTAGCCCGTTCCCGACTGTTTACCGTCGAGAGCGTGGATCTGGAGTTCAGCAATGGCGTGCGGCGTGTTTATGAACGAATGCGTCCAACCAACCGGGAAGCAGTGATGATTGTGCCGATTGTGGACGATCACCTGATCCTGATCCGCGAATACGCAGTGGGAACTGAATCCTACGAATTAGGTTTTTCGAAAGGATTAATTGATCCGGGTGAAAGCGTCTACGAAGCCGCTAACCGCGAGCTAAAAGAAGAGGTTGGATTTGGAGCGAACGATCTGACTTTTTTGAAGAAGCTCAGCATGGCACCGTCTTACTTTTCCAGCAAAATGAATATCGTGGTAGCGCAAGATCTCTACCCGGAATCACTGGAAGGCGATGAGCCAGAGCCGCTACCACAGGTGCGCTGGCCGCTGGCGCATATGATGGATTTGCTGGAAGACCCTGACTTCAATGAAGCGCGCAATGTCAGTGCGCTGTTCCTCGTGCGCGAATGGTTGAAAGGGCAGGGGCGAGTGTAA", - 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"ASAP:ABE-0011090" - ], - [ - "gene_synonym", - "mucM" - ], - [ - "gene_synonym", - "igaA" - ], - [ - "gene_synonym", - "ECK3385" - ], - [ - "gene_synonym", - "EcoGene:EG12927" - ] - ], - "dna_sequence": "ATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAGACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAAACGCGTAAACTCACACCTGAAGAACGTAGCGCCGTTGAAAATTATCTTGAGAGCCTGACGCAGGTATTACAGGTGCCTGGCCCAACGGGAGCCAGCGCGGCACCGATCTCTCTGGCGCTGAATGCCGAAAGCAACAACGTCATGATGCTGACACACGCTATCACGCGTTACGGCATCTCTACCGACGATCCGAATAAATGGCGTTACTACCTCGATTCGGTAGAAGTCCACCTGCCCCCTTTCTGGGAACAGTACATCAACGATGAGAATACCGTTGAACTGATTCATACCGATTCGCTGCCGCTGGTTATTTCACTCAACGGTCATACGCTGCAGGAGTACATGCAGGAAACTCGCAGCTATGCCTTGCAACCTGTTCCGTCAACGCAGGCGTCGATTCGCGGGGAAGAGAGTGAGCAAATCGAGCTACTCAATATTCGCAAAGAAACGCATGAAGAATATGCGCTGAGTCGTCCGCGCGGGCTGCGTGAAGCGTTGCTGATCGTCGCCTCCTTCCTGATGTTCTTTTTCTGCCTGATTACCCCGGATGTATTTGTTCCGTGGCTGGCAGGCGGCGCGTTACTGCTGCTGGGCGCAGGTCTGTGGGGGCTATTCGCGCCCCCGGCAAAATCCTCCCTGCGGGAAATTCATTGTCTGCGCGGTACACCCCGTCGTTGGGGATTGTTTGGCGAAAACGATCAGGAACAGATCAACAATATTTCACTCGGTATTATCGACCTGGTCTATCCCGCACACTGGCAGCCATACATTGCTCAGGATCTCGGTCAACAAACCGATATCGATATCTATCTCGACCGCCATGTAGTGCGTCAGGGACGATATCTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGCTGTTTATGCTGTTATTCTGGATCCCGCTGGATATGCCGCTGAAATTCACTCTCTCATGGATGAAAGGCGCGCAGACCATTGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTGTAATATTCGAACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCAGATCATCTGGAACGACGCCCGCTCATTGCCATTACCAGAATCTGAACTGGTCAACAAAGCGACGGCATTGACTGAAGCAGTTAATCGCCAGCTGCACCCTAAACCGGAAGATGAATCTCGCGTCAGTGCCTCATTACGTTCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGGATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCAATGGTACGCAGCATATTGGCCTTCATCCGATCCCGGATCGTTCCGGCCTGTGGCGCTATCTCAGCACCACATTGCTGCTACTGACGATGCTGGGTAGCGCCATTTACAATGGCGTACAGGCCTGGCGTCGTTACCAGCGTCATCGCACTCGCATGATGGAGATTCAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAA", 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"MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETRSYALQPVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQDLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRVGDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLIE", - "protein_translation_length": 711, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yrfG" - ], - [ - "gene_synonym", - "b3399" - ], - [ - "gene_synonym", - "GI:90111585" - ], - [ - "gene_synonym", - "ASAP:ABE-0011092" - ], - [ - "gene_synonym", - "JW5865" - ], - [ - "gene_synonym", - "EcoGene:EG12928" - ], - [ - "gene_synonym", - "NP_417858.4" - ], - [ - "gene_synonym", - "ECK3386" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64636" - ], - [ - "gene_synonym", - "GeneID:947904" - ] - ], - "dna_sequence": "ATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATGGGGCGCGAAAAACGGGGTTACGCCACAGGAAGCGATGGAATATATGCGCCAGCAATATCACGACGTACAGCATACGCTAAACTGGTACTGTCTTGATTACTGGAGTGAGCAACTGGGTCTGGATATCTGTGCGATGACCACCGAGATGGGACCGCGTGCCGTACTGCGTGAAGATACCATTCCGTTTCTTGAGGCACTGAAAGCCAGCGGTAAGCAGCGAATTTTGCTCACCAATGCGCATCCGCACAACCTGGCGGTAAAACTTGAGCATACCGGTCTGGACGCACACCTTGATTTATTACTTTCCACCCACACATTTGGTTATCCGAAAGAGGATCAGCGGTTATGGCATGCGGTGGCCGAAGCTACGGGTCTGAAAGCTGAAAGAACGCTGTTTATTGATGACAGCGAAGCGATTCTCGATGCTGCCGCGCAATTTGGTATTCGTTACTGCCTCGGCGTGACTAATCCTGATTCCGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGA", - "dna_sequence_length": 669, - "functions": [ - "GMP/IMP nucleotidase" - ], - "id": "CDS_3337", - "location": [ - [ - "NC_000913", - 3528669, - "+", - 669 - ] - ], - "md5": "eccf7d742af96426acd0b467e1abc711", - "parent_gene": "", - "protein_md5": "50de4a9acc2a2c50cf28b01e4ddd6a12", - "protein_translation": "MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGVTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFLEALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAEATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM", - "protein_translation_length": 222, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131277" - ], - [ - "gene_synonym", - "b3400" - ], - [ - "gene_synonym", - "ASAP:ABE-0011094" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACG8" - ], - [ - "gene_synonym", - "yrfH" - ], - [ - "gene_synonym", - "JW3363" - ], - [ - "gene_synonym", - "hslR" - ], - [ - "gene_synonym", - "EcoGene:EG12929" - ], - [ - "gene_synonym", - "ECK3387" - ], - [ - "gene_synonym", - "GeneID:947912" - ], - [ - "gene_synonym", - "NP_417859.1" - ] - ], - "dna_sequence": "ATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAGAGACTGCGGAAAGTGTAGAGAAACGCGAAAAAATGGCGCTGGCACGTAAACTTAATGCCTTAACCATGCCGCACCCGGACCGACGCCCGGACAAAAAAGAGCGCCGCGACCTGTTACGATTTAAACACGGCGACAGTGAATAA", - "dna_sequence_length": 402, - "functions": [ - "ribosome-associated heat shock protein Hsp15" - ], - "id": "CDS_3338", - "location": [ - [ - "NC_000913", - 3529348, - "+", - 402 - ] - ], - "md5": "0f8cc28ed1d04fbbe2675ae3a5129820", - "parent_gene": "", - "protein_md5": "ffd3ae488feb0a7b0ad90f4f5fa81c8d", - "protein_translation": "MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSKPSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMALARKLNALTMPHPDRRPDKKERRDLLRFKHGDSE", - "protein_translation_length": 133, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6Y5" - ], - [ - "gene_synonym", - "b3401" - ], - [ - "gene_synonym", - "GI:90111586" - ], - [ - "gene_synonym", - "yrfI" - ], - [ - "gene_synonym", - "hslO" - ], - [ - "gene_synonym", - "GeneID:947178" - ], - [ - "gene_synonym", - "JW5692" - ], - [ - "gene_synonym", - "ECK3388" - ], - [ - "gene_synonym", - "NP_417860.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0011096" - ], - [ - "gene_synonym", - "EcoGene:EG12930" - ] - ], - "dna_sequence": "ATGCCGCAACATGACCAATTACATCGCTATCTGTTTGAAAACTTTGCCGTGCGCGGCGAACTGGTAACCGTTTCGGAAACCCTGCAACAGATCCTTGAGAACCACGATTATCCGCAGCCCGTTAAAAACGTGCTGGCAGAACTGCTGGTTGCGACCAGCCTGTTAACCGCTACGCTGAAGTTTGATGGTGATATCACCGTACAGCTGCAGGGCGACGGTCCGATGAATCTGGCGGTTATTAACGGTAACAATAACCAGCAGATGCGCGGTGTGGCGCGCGTGCAGGGCGAAATTCCAGAAAATGCCGACCTGAAAACGCTGGTCGGCAATGGTTACGTGGTGATCACCATTACCCCGAGCGAAGGCGAACGCTATCAGGGCGTAGTTGGTCTGGAAGGTGATACCCTGGCGGCCTGCCTGGAAGATTACTTTATGCGTTCTGAACAGCTGCCGACGCGCCTGTTTATTCGCACCGGCGACGTAGACGGCAAACCGGCTGCAGGCGGTATGTTGTTGCAGGTAATGCCTGCGCAAAATGCCCAGCAGGACGACTTTGACCACCTGGCGACGCTAACCGAAACCATCAAAACCGAAGAACTGCTGACCTTACCGGCAAACGAAGTGTTGTGGCGTTTGTATCACGAAGAAGAGGTGACGGTTTACGATCCGCAGGATGTGGAGTTCAAATGCACCTGCTCGCGTGAACGTTGCGCCGATGCGCTGAAAACGCTGCCTGATGAAGAAGTTGATAGCATCCTGGCGGAAGATGGCGAAATTGACATGCATTGTGATTACTGCGGTAACCACTATCTGTTCAATGCGATGGATATTGCTGAAATCCGCAACAACGCGTCTCCGGCAGATCCGCAAGTTCATTAA", - "dna_sequence_length": 879, - "functions": [ - "heat shock protein Hsp33" - ], - "id": "CDS_3339", - "location": [ - [ - "NC_000913", - 3529774, - "+", - 879 - ] - ], - "md5": "cd79d387189aaf86c483f2717bfaa923", - "parent_gene": "", - "protein_md5": "318d18d3118b6b44e1aed873603a898a", - "protein_translation": "MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENADLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGDVDGKPAAGGMLLQVMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEVTVYDPQDVEFKCTCSRERCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMDIAEIRNNASPADPQVH", - "protein_translation_length": 292, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3402" - ], - [ - "gene_synonym", - "GeneID:947651" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P45804" - ], - [ - "gene_synonym", - "yhgE" - ], - [ - "gene_synonym", - "GI:16131279" - ], - [ - "gene_synonym", - "JW3365" - ], - [ - "gene_synonym", - "ECK3389" - ], - [ - "gene_synonym", - "EcoGene:EG12931" - ], - [ - "gene_synonym", - "ASAP:ABE-0011098" - ], - [ - "gene_synonym", - "NP_417861.1" - ] - ], - "dna_sequence": "ATGGATAACGTTGAACTTTCACCCGCAACACGCTGGGGGATGATTGCTACCGGATTACTTCAGGGTCTGGTTTGCTACCTGCTGATCGCCTGGCTTTCCGGAAAAAATCACAGTTGGATTGTTTATGGCGTGCCTGCGACCGTCGCGTTTTCATCCGTTTTACTCTTCTCCGTGATCTCTTTTAAACAGAAGCGCCTTTGGGGATGGCTGGCGCTAGTGTTTATTGCCACGCTGGGGATGAGCGGCTGGCTGAAGTGGCAAACTGATGGCATGAACCCCTGGAGAGCTGAAAAGGCGCTTTGGGATTTTGGTTGCTATCTGCTGTTGATGGCAATGTTGTTGCTACCGTGGATACAACAAAGCCTTCGCATCCGCAATGACAGTAGCCGCTATCGCTATTTTTACCAGTCAGTATGGCATAACGTACTTATATTACTGGTGATTTTTCTCGCCAATGGCTTGACGTGGCTGGTGCTTTTACTGTGGAGTGAGTTGTTTAAACTTGTTGGCATCACGTTTTTCAATACGCTCTTTTTTGCAACCGACTGGTTTATTTATCTCACGTTAGGTCTGGTTACCGCGCTGGCGGTGATCCTCGCGCGAACACAGTCACGTTTAATCGACTCTATTCAAAAGTTGTTCACGTTAATCGCCACGGGGTTGCTGCCGTTAGTATCATTGCTAACCCTGATGTTTATCATCACCCTGCCGTTTACGGGCCTGAGCGCGATTTCTCGCCACATCTCCGCCGCCGGGTTGCTGTTGACGCTGGCCTTTTTGCAATTGATCTTAATGGCTATTGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACAGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTCCGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGCGTGCTGGCGGTGCTGGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTCAGCATCGTCTGGCGTAAAGGGCAAAATCCCGTTGTTCTTCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGGACAGTATGCGCATTAGCGTGAACAGCCATATGGCGCGTTATCAGAGCGGCAAAAACACGTCAGACCAGGTAACTATCTACATGCTCGAGCAGAGCGGTCGCTATGGACGTGCTGCGCTTGAGTCGCTGAAAAGCGATGCCGGGTTTATGAAAGACCCGAAACGCGCGCGGGATCTGCTGATGGCGTTAGATGGAGAGCAACATCTTCAGCAACAGGTATCGGAAAAAGTATTAGCCGATAATGTGTTAATTGCCCCTGGTTCTGTTAAACCTGATGCGACATTCTGGTCGGCCTTAATCCAGGATCGCTATAACGTGATGACCTGTATTGAAAAAGACGCCTGCGTCCTGGTCGAGCAAGATCTGAATAGTGATGGTCAGGCGGAGCGGATCCTGTTTGCTTTTAATGATGACAGAGTCATTGTCTATGGCTTTGACTCAGACAGAAAAGAATGGGACGCGCTTGATATGAGTTTACTTCCGAACGAAATAACGAAAGAAAAATTACTCACAGCTGCGAAGGATGGAAAACTGGGGACGAAGCCTAAAGCGTGGCGCGATCTTGTAGTGGATGGTGAAAGGCTGAATGTGAATCTGAATGAGTGA", 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"gene_synonym", - "b3403" - ], - [ - "gene_synonym", - "ECK3390" - ], - [ - "gene_synonym", - "NP_417862.1" - ], - [ - "gene_synonym", - "GeneID:945667" - ], - [ - "gene_synonym", - "EcoGene:EG10688" - ], - [ - "gene_synonym", - "pck" - ], - [ - "gene_synonym", - "pckA" - ], - [ - "gene_synonym", - "JW3366" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P22259" - ], - [ - "gene_synonym", - "ASAP:ABE-0011106" - ], - [ - "gene_synonym", - "GI:16131280" - ] - ], - "dna_sequence": "ATGCGCGTTAACAATGGTTTGACCCCGCAAGAACTCGAGGCTTATGGTATCAGTGACGTACATGATATCGTTTACAACCCAAGCTACGACCTGCTGTATCAGGAAGAGCTCGATCCGAGCCTGACAGGTTATGAGCGCGGGGTGTTAACTAATCTGGGTGCCGTTGCCGTCGATACCGGGATCTTCACCGGTCGTTCACCAAAAGATAAGTATATCGTCCGTGACGATACCACTCGCGATACTTTCTGGTGGGCAGACAAAGGCAAAGGTAAGAACGACAACAAACCTCTCTCTCCGGAAACCTGGCAGCATCTGAAAGGCCTGGTGACCAGGCAGCTTTCCGGCAAACGTCTGTTCGTTGTCGACGCTTTCTGTGGTGCGAACCCGGATACTCGTCTTTCCGTCCGTTTCATCACCGAAGTGGCCTGGCAGGCGCATTTTGTCAAAAACATGTTTATTCGCCCGAGCGATGAAGAACTGGCAGGTTTCAAACCAGACTTTATCGTTATGAACGGCGCGAAGTGCACTAACCCGCAGTGGAAAGAACAGGGTCTCAACTCCGAAAACTTCGTGGCGTTTAACCTGACCGAGCGCATGCAGCTGATTGGCGGCACCTGGTACGGCGGCGAAATGAAGAAAGGGATGTTCTCGATGATGAACTACCTGCTGCCGCTGAAAGGTATCGCTTCTATGCACTGCTCCGCCAACGTTGGTGAGAAAGGCGATGTTGCGGTGTTCTTCGGCCTTTCCGGCACCGGTAAAACCACCCTTTCCACCGACCCGAAACGTCGCCTGATTGGCGATGACGAACACGGCTGGGACGATGACGGCGTGTTTAACTTCGAAGGCGGCTGCTACGCAAAAACTATCAAGCTGTCGAAAGAAGCGGAACCTGAAATCTACAACGCTATCCGTCGTGATGCGTTGCTGGAAAACGTCACCGTGCGTGAAGATGGCACTATCGACTTTGATGATGGTTCAAAAACCGAGAACACCCGCGTTTCTTATCCGATCTATCACATCGATAACATTGTTAAGCCGGTTTCCAAAGCGGGCCACGCGACTAAGGTTATCTTCCTGACTGCTGATGCTTTCGGCGTGTTGCCGCCGGTTTCTCGCCTGACTGCCGATCAAACCCAGTATCACTTCCTCTCTGGCTTCACCGCCAAACTGGCCGGTACTGAGCGTGGCATCACCGAACCGACGCCAACCTTCTCCGCTTGCTTCGGCGCGGCATTCCTGTCGCTGCACCCGACTCAGTACGCAGAAGTGCTGGTGAAACGTATGCAGGCGGCGGGCGCGCAGGCTTATCTGGTTAACACTGGCTGGAACGGCACTGGCAAACGTATCTCGATTAAAGATACCCGCGCCATTATCGACGCCATCCTCAACGGTTCGCTGGATAATGCAGAAACCTTCACTCTGCCGATGTTTAACCTGGCGATCCCAACCGAACTGCCGGGCGTAGACACGAAGATTCTCGATCCGCGTAACACCTACGCTTCTCCGGAACAGTGGCAGGAAAAAGCCGAAACCCTGGCGAAACTGTTTATCGACAACTTCGATAAATACACCGACACCCCTGCGGGTGCCGCGCTGGTAGCGGCTGGTCCGAAACTGTAA", 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"gene_synonym", - "b3404" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEJ4" - ], - [ - "gene_synonym", - "GeneID:947272" - ], - [ - "gene_synonym", - "tpo" - ], - [ - "gene_synonym", - "NP_417863.1" - ], - [ - "gene_synonym", - "perA" - ], - [ - "gene_synonym", - "ECK3391" - ], - [ - "gene_synonym", - "JW3367" - ], - [ - "gene_synonym", - "EcoGene:EG10269" - ], - [ - "gene_synonym", - "ompB" - ], - [ - "gene_synonym", - "GI:16131281" - ], - [ - "gene_synonym", - "cpr" - ], - [ - "gene_synonym", - "ASAP:ABE-0011108" - ] - ], - "dna_sequence": "ATGAGGCGATTGCGCTTCTCGCCACGAAGTTCATTTGCCCGTACGTTATTGCTCATCGTCACCTTGCTGTTCGCCAGCCTGGTGACGACTTATCTGGTGGTGCTGAACTTCGCGATTTTGCCGAGCCTCCAGCAGTTTAATAAAGTCCTCGCGTACGAAGTGCGTATGTTGATGACCGACAAACTGCAACTGGAGGACGGCACGCAGTTGGTTGTGCCTCCCGCTTTCCGTCGGGAGATCTACCGTGAGCTGGGGATCTCTCTCTACTCCAACGAGGCTGCCGAAGAGGCAGGTCTGCGTTGGGCGCAACACTATGAATTCTTAAGCCATCAGATGGCGCAGCAACTGGGCGGCCCGACGGAAGTGCGCGTTGAGGTCAACAAAAGTTCGCCTGTCGTCTGGCTGAAAACCTGGCTGTCGCCCAATATCTGGGTACGCGTGCCGCTGACCGAAATTCATCAGGGCGATTTCTCTCCGCTGTTCCGCTATACGCTGGCGATTATGCTATTGGCGATAGGCGGGGCGTGGCTGTTTATTCGTATCCAGAACCGACCGTTGGTCGATCTCGAACACGCAGCCTTGCAGGTTGGTAAAGGGATTATTCCGCCGCCGCTGCGTGAGTATGGCGCTTCGGAGGTGCGTTCCGTTACCCGTGCCTTTAACCATATGGCGGCTGGTGTTAAGCAACTGGCGGATGACCGCACGCTGCTGATGGCGGGGGTAAGTCACGACTTGCGCACGCCGCTGACGCGTATTCGCCTGGCGACTGAGATGATGAGCGAGCAGGATGGCTATCTGGCAGAATCGATCAATAAAGATATCGAAGAGTGCAACGCCATCATTGAGCAGTTTATCGACTACCTGCGCACCGGGCAGGAGATGCCGATGGAAATGGCGGATCTTAATGCAGTACTCGGTGAGGTGATTGCTGCCGAAAGTGGCTATGAGCGGGAAATTGAAACCGCGCTTTACCCCGGCAGCATTGAAGTGAAAATGCACCCGCTGTCGATCAAACGCGCGGTGGCGAATATGGTGGTCAACGCCGCCCGTTATGGCAATGGCTGGATCAAAGTCAGCAGCGGAACGGAGCCGAATCGCGCCTGGTTCCAGGTGGAAGATGACGGTCCGGGAATTGCGCCGGAACAACGTAAGCACCTGTTCCAGCCGTTTGTCCGCGGCGACAGTGCGCGCACCATTAGCGGCACGGGATTAGGGCTGGCAATTGTGCAGCGTATCGTGGATAACCATAACGGGATGCTGGAGCTTGGCACCAGCGAGCGGGGCGGGCTTTCCATTCGCGCCTGGCTGCCAGTGCCGGTAACGCGGGCGCAGGGCACGACAAAAGAAGGGTAA", 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"gene_synonym", - "ompR" - ], - [ - "gene_synonym", - "EcoGene:EG10672" - ], - [ - "gene_synonym", - "ASAP:ABE-0011110" - ], - [ - "gene_synonym", - "ECK3392" - ], - [ - "gene_synonym", - "kmt" - ], - [ - "gene_synonym", - "ompB" - ], - [ - "gene_synonym", - "GI:16131282" - ], - [ - "gene_synonym", - "JW3368" - ], - [ - "gene_synonym", - "GeneID:947913" - ], - [ - "gene_synonym", - "NP_417864.1" - ] - ], - "dna_sequence": "ATGCAAGAGAACTACAAGATTCTGGTGGTCGATGACGACATGCGCCTGCGTGCGCTGCTGGAACGTTATCTCACCGAACAAGGCTTCCAGGTTCGAAGCGTCGCTAATGCAGAACAGATGGATCGCCTGCTGACTCGTGAATCTTTCCATCTTATGGTACTGGATTTAATGTTACCTGGTGAAGATGGCTTGTCGATTTGCCGACGTCTTCGTAGTCAGAGCAACCCGATGCCGATCATTATGGTGACGGCGAAAGGGGAAGAAGTGGACCGTATCGTAGGCCTGGAGATTGGCGCTGACGACTACATTCCAAAACCGTTTAACCCGCGTGAACTGCTGGCCCGTATCCGTGCGGTGCTGCGTCGTCAGGCGAACGAACTGCCAGGCGCACCGTCACAGGAAGAGGCGGTAATTGCTTTCGGTAAGTTCAAACTTAACCTCGGTACGCGCGAAATGTTCCGCGAAGACGAGCCGATGCCGCTCACCAGCGGTGAGTTTGCGGTACTGAAGGCACTGGTCAGCCATCCGCGTGAGCCGCTCTCCCGCGATAAGCTGATGAACCTTGCCCGTGGTCGTGAATATTCCGCAATGGAACGCTCCATCGACGTGCAGATTTCGCGTCTGCGCCGCATGGTGGAAGAAGATCCAGCGCATCCGCGTTACATTCAGACCGTCTGGGGTCTGGGCTACGTCTTTGTACCGGACGGCTCTAAAGCATGA", - "dna_sequence_length": 720, - "functions": [ - "response regulator in two-component regulatory system with EnvZ" - ], - "id": "CDS_3343", - "location": [ - [ - "NC_000913", - 3536584, - "-", - 720 - ] - ], - "md5": "d6750888682a41dfa4f1eba4bdc6a5ce", - "parent_gene": "", - "protein_md5": "d8521a76d5088ea0467c0daab9e28465", - "protein_translation": "MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMPLTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGSKA", - "protein_translation_length": 239, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3406" - ], - [ - "gene_synonym", - "GeneID:2847706" - ], - [ - "gene_synonym", - "EcoGene:EG11578" - ], - [ - "gene_synonym", - "GI:90111587" - ], - [ - "gene_synonym", - "YP_026216.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30128" - ], - [ - "gene_synonym", - "ECK3393" - ], - [ - "gene_synonym", - "greB" - ], - [ - "gene_synonym", - "ASAP:ABE-0011117" - ], - [ - "gene_synonym", - "JW3369" - ] - ], - "dna_sequence": "ATGAAAACGCCCCTGGTTACCCGGGAAGGGTATGAAAAACTCAAACAAGAGCTTAATTATCTCTGGCGTGAAGAACGCCCGGAGGTCACAAAAAAGGTGACCTGGGCCGCAAGTCTGGGCGACCGCAGCGAAAATGCTGACTATCAGTATAATAAAAAGCGTCTGCGTGAAATCGACCGTCGCGTGCGCTATCTCACTAAATGCCTGGAAAATCTCAAAATCGTCGATTACTCCCCTCAGCAGGAAGGCAAAGTCTTTTTTGGCGCGTGGGTGGAGATTGAAAACGACGATGGCGTGACTCACCGTTTCCGTATTGTCGGCTACGATGAAATTTTTGGCCGTAAAGATTACATCTCTATCGATTCCCCGATGGCCCGCGCATTGCTGAAAAAAGAAGTCGGCGATCTGGCGGTGGTGAATACCCCTGCCGGGGAAGCGAGCTGGTATGTTAATGCTATCGAGTACGTGAAACCGTAA", - "dna_sequence_length": 477, - "functions": [ - "transcript cleavage factor" - ], - "id": "CDS_3344", - "location": [ - [ - "NC_000913", - 3536812, - "+", - 477 - ] - ], - "md5": "0d011deb95ad7bc8c8c623d385f5d211", - "parent_gene": "", - "protein_md5": "cbd1e46fcee8c2b1fdf04f2ed9e3dcd9", - "protein_translation": "MKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFGAWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASWYVNAIEYVKP", - "protein_translation_length": 158, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3407" - ], - [ - "gene_synonym", - "GI:90111588" - ], - [ - "gene_synonym", - "yhgF" - ], - [ - "gene_synonym", - "tex" - ], - [ - "gene_synonym", - "NP_417866.4" - ], - [ - "gene_synonym", - "JW3370" - ], - [ - "gene_synonym", - "ECK3394" - ], - [ - "gene_synonym", - "EcoGene:EG12932" - ], - [ - "gene_synonym", - "ASAP:ABE-0011120" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46837" - ], - [ - "gene_synonym", - "GeneID:947911" - ] - ], - "dna_sequence": "ATGATGAATGATTCGTTCTGCCGCATTATTGCGGGTGAAATTCAGGCGCGCCCGGAACAGGTTGACGCTGCCGTTCGCCTGCTTGACGAAGGGAATACCGTGCCGTTTATCGCACGTTATCGTAAGGAAATCACCGGCGGTCTGGATGACACGCAGCTGCGTAATCTGGAAACGCGTCTGAGCTATCTGCGCGAGCTGGAAGAGAGACGTCAGGCGATCCTCAAGTCCATTTCCGAGCAAGGCAAACTCACCGATGATCTGGCGAAGGCCATCAACGCCACCCTAAGCAAAACCGAACTCGAAGACCTCTACCTGCCCTACAAACCTAAACGCCGCACCCGCGGGCAAATCGCCATTGAAGCAGGGCTTGAGCCGTTGGCTGACCTGCTGTGGAGCGATCCGTCACACACGCCAGAAGTCGCCGCTGCACAATATGTTTATGCCGATAAAGGCGTGGCAGATACCAAAGCCGCGCTGGATGGCGCGCGCTATATCCTGATGGAACGGTTTGCCGAAGATGCCGCGCTGCTGGCGAAAGTGCGTGATTATCTGTGGAAGAACGCGCATTTGGTTTCTACGGTGGTGAGCGGTAAAGAAGAGGAAGGGGCGAAATTCCGCGACTATTTCGATCATCACGAACCGTTGTCCACGGTGCCTTCTCACCGCGCGCTGGCGATGTTCCGTGGGCGTAACGAAGGCGTACTTCAGCTTTCGCTGAATGCCGATCCACAGTTCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCATGGATCACCTTGGCCTGCGCCTGAACAATGCCCCGGCGGATAGCTGGCGCAAAGGCGTGGTGAGCTGGACGTGGCGCATCAAGGTGCTGATGCATCTGGAAACCGAACTGATGGGCACCGTGCGCGAACGTGCGGAAGATGAAGCAATCAACGTCTTTGCCCGTAACCTGCACGATCTGCTGATGGCGGCCCCTGCCGGACTGCGTGCAACGATGGGCCTCGATCCGGGTCTGCGTACTGGGGTAAAAGTGGCGGTGGTCGATGCCACTGGCAAACTGGTGGCGACCGACACCATTTACCCGCACACCGGACAGGCCGCAAAAGCAGCGATGACCGTTGCTGCGCTGTGTGAAAAACATAACGTTGAACTGGTAGCGATCGGTAACGGTACAGCTTCCCGCGAAACTGAGCGTTTCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAACTGGACGCAGTAGTAGAAGACTGCGTAAACGCCGTTGGCGTCGATCTCAACACTGCTTCTGTTCCGCTGTTAACCCGCGTGGCGGGCCTGACGCGCATGATGGCGCAAAACATCGTTGCCTGGCGCGATGAGAACGGTCAGTTCCAGAACCGTCAGCAACTGTTAAAAGTGAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGTGCGCGGGCTTCTTGCGCATTAACCACGGTGATAACCCGCTGGACGCGTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACTGAAAGATCTGATGGGTAACAGCAGCGAACTGCGTAACCTGAAAGCGTCTGACTTTACTGATGAGAAATTCGGTGTGCCGACGGTAACCGACATCATCAAAGAGCTGGAAAAACCGGGTCGCGATCCGCGTCCGGAATTTAAAACCGCTCAGTTTGCCGATGGCGTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCAGTGACCAACGTCACCAACTTTGGCGCGTTTGTCGATATTGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCGTGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCGCCTGGATGAGCAGCCTGGCGAAACCAACGCTCGTCGCGGCGGCGGTAATGAACGCCCGCAAAACAACCGCCCGGCAGCCAAACCACGCGGTCGTGAAGCGCAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAA", 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"MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR", - "protein_translation_length": 773, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417867.1" - ], - [ - "gene_synonym", - "GeneID:947909" - ], - [ - "gene_synonym", - "EcoGene:EG12101" - ], - [ - "gene_synonym", - "b3408" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEL3" - ], - [ - "gene_synonym", - "GI:16131284" - ], - [ - "gene_synonym", - "ECK3395" - ], - [ - "gene_synonym", - "JW3371" - ], - [ - "gene_synonym", - "feoA" - ], - [ - "gene_synonym", - "ASAP:ABE-0011124" - ] - ], - "dna_sequence": "ATGCAATACACTCCAGATACTGCGTGGAAAATCACTGGCTTTTCCCGTGAAATCAGCCCGGCATATCGCCAAAAACTGCTTTCTCTTGGCATGTTACCTGGCTCCTCTTTTAATGTGGTGCGCGTCGCTCCACTCGGCGACCCCATTCATATCGAAACCCGTCGTGTGAGCCTGGTATTACGCAAAAAAGATCTGGCCTTATTAGAAGTGGAAGCGGTTTCCTGTTAA", - "dna_sequence_length": 228, - "functions": [ - "ferrous iron transporter, protein A" - ], - "id": "CDS_3346", - "location": [ - [ - "NC_000913", - 3540163, - "+", - 228 - ] - ], - "md5": "61ceaa21629e14a1c6d3e738e80f3a2b", - "parent_gene": "", - "protein_md5": "b994f7e159789c2d72f9d9ecfbe6ddb1", - "protein_translation": "MQYTPDTAWKITGFSREISPAYRQKLLSLGMLPGSSFNVVRVAPLGDPIHIETRRVSLVLRKKDLALLEVEAVSC", - "protein_translation_length": 75, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33650" - ], - [ - "gene_synonym", - "NP_417868.1" - ], - [ - "gene_synonym", - "GeneID:947919" - ], - [ - "gene_synonym", - "EcoGene:EG12102" - ], - [ - "gene_synonym", - "b3409" - ], - [ - "gene_synonym", - "GI:16131285" - ], - [ - "gene_synonym", - "JW3372" - ], - [ - "gene_synonym", - "ECK3396" - ], - [ - "gene_synonym", - "feoB" - ], - [ - "gene_synonym", - "ASAP:ABE-0011126" - ] - ], - "dna_sequence": "ATGAAAAAATTAACCATTGGCTTAATTGGTAATCCAAATTCTGGCAAGACAACGTTATTTAACCAGCTCACTGGCTCACGTCAGCGTGTAGGTAACTGGGCTGGCGTTACCGTCGAACGTAAAGAAGGGCAATTCTCCACCACCGATCATCAGGTCACGCTGGTGGACCTGCCCGGCACCTATTCTCTGACCACCATCTCATCGCAGACCTCGCTCGATGAGCAAATCGCCTGTCACTACATTTTGAGTGGCGACGCCGACCTGCTGATTAACGTGGTGGATGCGTCTAACCTTGAGCGTAACCTGTACCTGACGCTACAACTGCTGGAACTCGGCATTCCCTGCATTGTGGCACTGAACATGCTCGACATTGCCGAGAAGCAAAATATTCGTATTGAAATTGATGCTCTGTCGGCGCGTCTGGGCTGTCCGGTGATCCCGCTGGTTTCAACCCGTGGTCGCGGTATTGAAGCGCTCAAGCTGGCGATTGATCGCTATAAAGCTAACGAGAATGTGGAACTGGTGCATTACGCACAGCCGCTGCTCAACGAAGCAGATTCACTGGCAAAAGTGATGCCTTCCGACATCCCGCTGAAACAACGTCGCTGGCTGGGCCTGCAAATGCTGGAAGGCGATATCTACAGCCGCGCCTACGCCGGTGAAGCGTCGCAGCATCTGGATGCCGCCCTCGCCCGTCTGCGTAATGAGATGGACGATCCGGCGCTGCACATTGCCGATGCGCGTTACCAGTGCATTGCTGCCATCTGTGATGTGGTAAGCAACACCCTGACGGCAGAACCCAGCCGTTTCACCACTGCGGTAGATAAAATCGTGCTCAACCGTTTCCTCGGTCTGCCGATTTTCCTCTTTGTGATGTACCTGATGTTCCTGCTGGCTATCAACATCGGCGGGGCGTTACAGCCGCTGTTTGACGTCGGCTCCGTGGCGCTATTTGTGCATGGTATTCAATGGATTGGCTACACGCTCCACTTCCCGGACTGGCTGACTATCTTCCTCGCCCAGGGCCTGGGTGGCGGCATTAACACCGTGCTGCCACTGGTGCCGCAGATTGGCATGATGTACCTGTTCCTCTCCTTCCTTGAGGACTCCGGGTATATGGCGCGTGCGGCGTTTGTGATGGACCGTCTGATGCAGGCGCTGGGCTTGCCGGGGAAATCCTTTGTGCCGCTGATCGTCGGTTTCGGTTGTAACGTACCGTCGGTAATGGGTGCACGTACGCTTGATGCACCGCGTGAACGTCTGATGACCATCATGATGGCACCGTTTATGTCCTGCGGCGCGCGTCTGGCTATCTTCGCAGTATTCGCGGCTGCCTTCTTCGGGCAGAACGGTGCGCTGGCGGTCTTCTCGCTGTATATGCTGGGTATTGTGATGGCGGTGCTGACTGGCCTGATGCTCAAGTACACCATCATGCGCGGTGAAGCGACGCCGTTTGTCATGGAGTTGCCGGTCTATCATGTACCACACGTTAAAAGCCTGATTATCCAGACCTGGCAGCGTCTGAAAGGCTTCGTTCTGCGTGCTGGTAAAGTGATCATCATCGTCAGCATTTTCCTGAGCGCTTTCAACAGCTTCTCGCTGAGCGGGAAAATCGTCGATAACATCAACGACTCGGCGCTGGCGTCCGTCAGCCGGGTGATCACCCCGGTCTTCAAGCCAATTGGCGTGCATGAAGATAACTGGCAGGCAACGGTTGGCCTGTTTACAGGTGCCATGGCGAAAGAAGTGGTAGTGGGTACGCTCAACACCCTCTACACCGCAGAAAATATTCAGGACGAAGAGTTCAATCCGGCAGAATTTAACCTCGGTGAAGAGCTGTTCAGTGCGATAGATGAAACCTGGCAGAGCCTGAAAGACACCTTCAGCCTTAGCGTACTGATGAACCCCATTGAAGCCAGCAAAGGCGACGGCGAAATGGGTACCGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGGGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAGCCTGGTGTGCATTCTGGCGGTTATCCTGTTTAACATCGTGGTTATCGGTCTGCTGCGCCGCGCGCGTAGCCGGGTGGATATCGAACTGCTGGCAACCCGCAAGTCGGTAAGCAGTTGCTGCGCAGCCAGCACCACCGGTGATTGCCATTAA", 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"MKKLTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNLYLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALKLAIDRYKANENVELVHYAQPLLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAYAGEASQHLDAALARLRNEMDDPALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDKIVLNRFLGLPIFLFVMYLMFLLAINIGGALQPLFDVGSVALFVHGIQWIGYTLHFPDWLTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGKSFVPLIVGFGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQNGALAVFSLYMLGIVMAVLTGLMLKYTIMRGEATPFVMELPVYHVPHVKSLIIQTWQRLKGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKPIGVHEDNWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDEEFNPAEFNLGEELFSAIDETWQSLKDTFSLSVLMNPIEASKGDGEMGTGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMGAIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQHPTYSLVCILAVILFNIVVIGLLRRARSRVDIELLATRKSVSSCCAASTTGDCH", - "protein_translation_length": 773, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12933" - ], - [ - "gene_synonym", - "b3410" - ], - [ - "gene_synonym", - "NP_417869.1" - ], - [ - "gene_synonym", - "yhgG" - ], - [ - "gene_synonym", - "GeneID:947918" - ], - [ - "gene_synonym", - "ASAP:ABE-0011130" - ], - [ - "gene_synonym", - "GI:16131286" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64638" - ], - [ - "gene_synonym", - "ECK3397" - ], - [ - "gene_synonym", - "JW3373" - ], - [ - "gene_synonym", - "feoC" - ] - ], - "dna_sequence": "ATGGCTTCACTTATTCAGGTGCGCGATTTGCTGGCGTTACGGGGCCGTATGGAAGCGGCCCAGATAAGCCAGACATTGAACACTCCACAGCCAATGATTAACGCCATGCTGCAACAACTGGAAAGTATGGGCAAAGCCGTGCGGATTCAGGAAGAACCTGACGGCTGCCTCTCTGGCAGTTGTAAAAGCTGCCCGGAAGGAAAAGCCTGTCTGCGCGAGTGGTGGGCGCTGCGTTAA", - "dna_sequence_length": 237, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_3348", - "location": [ - [ - "NC_000913", - 3542728, - "+", - 237 - ] - ], - "md5": "5b324f74f8e3f04be2d4649c1551f588", - "parent_gene": "", - "protein_md5": "a92cc032b8a01cb91bacd45a79b194b6", - "protein_translation": "MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR", - "protein_translation_length": 78, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3411" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31667" - ], - [ - "gene_synonym", - "NP_417870.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011134" - ], - [ - "gene_synonym", - "yhgA" - ], - [ - "gene_synonym", - "JW3374" - ], - [ - "gene_synonym", - "GI:16131287" - ], - [ - "gene_synonym", - "EcoGene:EG11750" - ], - [ - "gene_synonym", - "GeneID:947917" - ], - [ - "gene_synonym", - "ECK3398" - ] - ], - "dna_sequence": "ATGAGCAAAAAGCAGAGTTCCACCCCACACGATGCGCTGTTCAAACTCTTTTTACGCCAACCGGACACGGCTCGTGATTTTCTTGCGTTTCATTTACCGGCACCCATTCACGCGCTTTGTGATATGAAAACCCTCAAGCTGGAGTCGAGCAGCTTTATTGATGACGATCTGCGTGAAAGCTATTCCGATGTGCTGTGGTCGGTGAAAACGGAACAAGGACCAGGATACATCTATTGTCTGATTGAACATCAAAGCACCTCAAACAAACTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCTTGATGCTGGATACAAAACGTTGCCGATGGTGGTGCCATTGTTGTTTTACCACGGTATTGAAAGCCCCTATCCCTATTCGCTGTGTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACCGTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGGCGCTGCTGGAGTTAATTCAAAAACATATTCGTCAACGCGACCTGATGGGGCTGGTAGAGCAAATGGCCTGCTTATTAAGTAGTGGATACGCTAATGACAGACAAATCAAAGGGCTGTTTAATTACATACTGCAAACTGGCGACGCTGTACGTTTTAACGATTTTATCGACGGCGTTGCCGAACGTTCACCGAAACACAAGGAGAGTTTAATGACTATTGCGGAAAGATTGCGGCAGGAGGGGGAACAATCCAAAGCCCTGCATATAGCCAAAATAATGCTTGAATCCGGAGTTCCTCTTGCAGACATCATGCGCTTTACCGGGCTGTCAGAAGAAGAGTTGGCTGCGGCGAGTCAGTAA", - "dna_sequence_length": 879, - "functions": [ - "transposase_31 family protein" - ], - "id": "CDS_3349", - "location": [ - [ - "NC_000913", - 3543167, - "+", - 879 - ] - ], - "md5": "185c45c44d9df840f739dd37d0d2179a", - "parent_gene": "", - "protein_md5": "19b24c4eff6b087a6b23c2cc6f8a3767", - "protein_translation": "MSKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKTLKLESSSFIDDDLRESYSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMRYAIAAMQNHLDAGYKTLPMVVPLLFYHGIESPYPYSLCWLDCFADPKLARQLYASAFPLIDVTVMPDDEIMQHRRMALLELIQKHIRQRDLMGLVEQMACLLSSGYANDRQIKGLFNYILQTGDAVRFNDFIDGVAERSPKHKESLMTIAERLRQEGEQSKALHIAKIMLESGVPLADIMRFTGLSEEELAAASQ", - "protein_translation_length": 292, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "bioB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P13001" - ], - [ - "gene_synonym", - "EcoGene:EG10122" - ], - [ - "gene_synonym", - "b3412" - ], - [ - "gene_synonym", - "NP_417871.1" - ], - [ - "gene_synonym", - "bioH" - ], - [ - "gene_synonym", - "ASAP:ABE-0011136" - ], - [ - "gene_synonym", - "JW3375" - ], - [ - "gene_synonym", - "ECK3399" - ], - [ - "gene_synonym", - "GeneID:947916" - ], - [ - "gene_synonym", - "GI:16131288" - ] - ], - "dna_sequence": "ATGAATAACATCTGGTGGCAGACCAAAGGTCAGGGGAATGTTCATCTTGTGCTGCTGCACGGATGGGGACTGAATGCCGAAGTGTGGCGTTGCATTGACGAGGAACTTAGCTCGCATTTTACGCTGCACCTTGTTGACCTGCCCGGCTTCGGGCGTAGCCGGGGATTTGGTGCGCTGTCACTTGCTGATATGGCCGAAGCCGTGCTGCAACAGGCACCTGATAAAGCCATTTGGTTAGGCTGGAGTCTGGGCGGGCTGGTGGCAAGCCAGATTGCGTTAACCCATCCCGAGCGTGTTCAGGCGCTGGTCACCGTGGCGTCGTCACCTTGTTTTAGTGCTCGTGACGAGTGGCCGGGGATAAAACCGGACGTGCTGGCGGGATTTCAGCAGCAACTCAGTGATGATTTTCAGCGTACAGTGGAGCGGTTCCTGGCGTTACAAACCATGGGGACTGAAACGGCGCGCCAGGATGCGCGGGCGTTGAAGAAAACCGTTCTGGCGTTACCGATGCCGGAGGTTGACGTGCTTAATGGCGGGCTGGAAATCCTGAAAACGGTCGATCTCCGTCAGCCGCTGCAAAACGTGTCCATGCCGTTTTTGCGATTGTATGGCTATCTCGACGGTCTGGTGCCGCGCAAAGTGGTGCCGATGCTGGATAAACTTTGGCCTCACAGCGAATCATATATCTTCGCCAAAGCGGCCCATGCGCCATTTATTTCGCATCCGGCCGAGTTTTGTCACCTGCTGGTGGCGTTGAAGCAGAGGGTGTAG", - "dna_sequence_length": 771, - "functions": [ - "pimeloyl-ACP methyl ester carboxylesterase" - ], - "id": "CDS_3350", - "location": [ - [ - "NC_000913", - 3544844, - "-", - 771 - ] - ], - "md5": "b047c392388baec770ef32d7217012e8", - "parent_gene": "", - "protein_md5": "90dd4e3546b019c08092479057c66d2b", - "protein_translation": "MNNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQRV", - "protein_translation_length": 256, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111589" - ], - [ - "gene_synonym", - "b3413" - ], - [ - "gene_synonym", - "yhgH" - ], - [ - "gene_synonym", - "JW5691" - ], - [ - "gene_synonym", - "gntX" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46846" - ], - [ - "gene_synonym", - "ECK3400" - ], - [ - "gene_synonym", - "GeneID:947915" - ], - [ - "gene_synonym", - "NP_417872.2" - ], - [ - "gene_synonym", - "EcoGene:EG12934" - ], - [ - "gene_synonym", - "ASAP:ABE-0011139" - ] - 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"protein_translation": "MLTVPGLCWLCRMPLALGHWGICSVCSRATRTDKTLCPQCGLPATHSHLPCGRCLQKPPPWQRLVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVLHARRTTGLQLPDRIVSVPLWQRRHWRRGFNQSDLLCQPLSRWLHCQWDSEAVTRTRATATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAAAVQVWCLCRTL", - "protein_translation_length": 227, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63020" - ], - [ - "gene_synonym", - "b3414" - ], - [ - "gene_synonym", - "ASAP:ABE-0011144" - ], - [ - "gene_synonym", - "yhgI" - ], - [ - "gene_synonym", - "GI:16131290" - ], - [ - "gene_synonym", - "GeneID:947925" - ], - [ - "gene_synonym", - "gntY" - ], - [ - "gene_synonym", - "JW3377" - ], - [ - "gene_synonym", - "nfuA" - ], - [ - "gene_synonym", - "ECK3401" - ], - [ - "gene_synonym", - "NP_417873.1" - ], - [ - "gene_synonym", - "EcoGene:EG12935" - ] - ], - "dna_sequence": "ATGATCCGTATTTCCGATGCTGCACAAGCGCACTTTGCCAAACTGCTGGCAAATCAGGAAGAAGGGACACAAATCCGCGTATTTGTGATTAACCCTGGCACGCCTAACGCTGAATGTGGCGTTTCTTATTGTCCGCCGGACGCTGTGGAAGCCACCGACACAGCCCTGAAATTTGACCTGCTGACCGCGTATGTTGATGAGTTAAGCGCACCATACCTGGAAGATGCAGAGATCGATTTTGTTACCGACCAGTTGGGTTCCCAGTTAACGCTGAAAGCCCCGAACGCCAAAATGCGTAAAGTGGCAGACGATGCACCGCTGATGGAGCGCGTGGAGTATATGCTGCAGTCGCAGATCAACCCACAGCTTGCTGGTCACGGTGGTCGCGTTTCGCTGATGGAAATCACCGAAGACGGTTACGCCATTCTGCAATTTGGCGGCGGCTGTAACGGTTGTTCCATGGTCGATGTGACGCTGAAAGAAGGGATCGAGAAGCAGCTGCTGAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAA", - "dna_sequence_length": 576, - "functions": [ - "Fe/S biogenesis protein, putative scaffold/chaperone protein" - ], - "id": "CDS_3352", - "location": [ - [ - "NC_000913", - 3545624, - "+", - 576 - ] - ], - "md5": "fa52aa866c9d4aa37f54d0f85b2305b2", - "parent_gene": "", - "protein_md5": "8924b747df2ef2fc99fc59d93ddb35c8", - "protein_translation": "MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRDLTEHQRGEHSYY", - "protein_translation_length": 191, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3415" - ], - [ - "gene_synonym", - "YP_026217.1" - ], - [ - "gene_synonym", - "gntTalpha" - ], - [ - "gene_synonym", - "GeneID:947924" - ], - [ - "gene_synonym", - "gntM" - ], - [ - "gene_synonym", - "EcoGene:EG12380" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39835" - ], - [ - "gene_synonym", - "usgA" - ], - [ - "gene_synonym", - "yhgC" - ], - [ - "gene_synonym", - "JW5690" - ], - [ - "gene_synonym", - "GI:49176350" - ], - [ - "gene_synonym", - "ASAP:ABE-0011148" - ], - [ - "gene_synonym", - "ECK3402" - ], - [ - "gene_synonym", - "gntT" - ] - ], - "dna_sequence": "ATGCCATTAGTCATTGTTGCTATCGGTGTAATCTTGTTGTTGCTCCTGATGATCCGCTTCAAAATGAACGGCTTCATCGCTCTCGTCCTCGTGGCGCTTGCTGTTGGATTAATGCAAGGAATGCCGCTGGATAAAGTTATTGGCTCCATCAAAGCCGGTGTCGGCGGGACGCTCGGTAGCCTTGCCCTGATCATGGGTTTTGGCGCAATGCTGGGCAAAATGCTGGCAGACTGCGGTGGCGCACAACGTATCGCCACCACGCTGATTGCCAAATTTGGTAAAAAACACATCCAGTGGGCGGTGGTACTGACCGGTTTTACCGTTGGTTTTGCCCTGTTCTATGAAGTGGGCTTTGTGCTGATGCTGCCGCTGGTGTTTACCATCGCGGCTTCTGCGAATATTCCACTGCTGTATGTTGGTGTACCAATGGCGGCTGCACTGTCTGTGACCCACGGCTTCCTGCCACCGCATCCGGGTCCGACTGCGATTGCCACCATTTTCAATGCCGATATGGGTAAAACCCTGCTGTACGGTACTATTCTGGCAATCCCGACCGTGATTCTCGCCGGTCCGGTTTACGCTCGCGTGTTGAAAGGTATCGATAAGCCAATTCCGGAAGGTCTCTACAGCGCGAAAACCTTCAGCGAAGAAGAGATGCCGAGCTTTGGCGTCAGCGTCTGGACCTCTCTGGTGCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGTGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGACACGCTGGTTTCTTCCATCAAAATCATTGCGATGATGCTGTTGATCATCGGTGGTGGCGGTGCGTTCAAGCAGGTGCTGGTAGACAGCGGCGTGGACAAATACATTGCTTCCATGATGCACGAAACCAACATTTCTCCGCTGCTGATGGCCTGGTCGATTGCTGCCGTACTGCGTATCGCGCTGGGTTCCGCAACCGTTGCGGCAATCACTGCGGGTGGTATCGCGGCACCGCTGATTGCAACGACGGGTGTTAGCCCGGAGCTGATGGTTATTGCGGTTGGTTCCGGTAGTGTGATTTTCTCTCATGTGAACGATCCGGGCTTCTGGCTGTTCAAAGAGTACTTTAACCTGACTATCGGCGAGACCATCAAATCCTGGTCGATGCTGGAAACCATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGA", 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"gene_synonym", - "GI:16131292" - ], - [ - "gene_synonym", - "NP_417875.1" - ], - [ - "gene_synonym", - "malQ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15977" - ], - [ - "gene_synonym", - "EcoGene:EG10561" - ], - [ - "gene_synonym", - "ECK3403" - ], - [ - "gene_synonym", - "JW3379" - ], - [ - "gene_synonym", - "malA" - ] - ], - "dna_sequence": "ATGGAAAGCAAACGTCTGGATAATGCCGCGCTGGCGGCGGGGATTAGCCCCAATTACATCAATGCCCACGGTAAACCGCAGTCGATTAGCGCCGAAACCAAACGGCGTTTGCTTGACGCGATGCATCAACGTACCGCCACGAAAGTGGCGGTAACGCCAGTCCCGAATGTCATGGTTTATACCAGCGGCAAAAAAATGCCGATGGTGGTGGAGGGCAGCGGCGAATATAGCTGGCTGCTGACCACCGAAGAAGGAACGCAGTACAAAGGCCATGTAACGGGGGGCAAAGCGTTCAATCTACCGACGAAGCTGCCGGAAGGTTATCACACGCTGACACTCACCCAGGACGACCAGCGCGCGCATTGCCGGGTGATTGTCGCCCCGAAACGCTGTTACGAACCGCAGGCGTTGCTGAATAAACAAAAGCTGTGGGGTGCCTGCGTTCAGCTTTATACGCTGCGATCGGAAAAAAACTGGGGTATTGGGGATTTTGGCGATCTCAAAGCGATGCTGGTGGATGTGGCAAAACGTGGCGGGTCGTTCATTGGCCTGAACCCGATTCATGCGCTCTATCCGGCAAATCCGGAGAGCGCCAGCCCATACAGCCCGTCTTCTCGCCGTTGGCTGAATGTGATTTATATCGACGTTAACGCCGTTGAAGATTTCCATCTTAGCGAAGAGGCTCAGGCCTGGTGGCAGTTGCCGACCACGCAACAGACGCTGCAACAGGCGCGCGATGCCGACTGGGTCGATTACTCCACGGTTACCGCCCTAAAAATGACAGCATTACGAATGGCGTGGAAAGGTTTCGCGCAACGTGATGATGAGCAGATGGCCGCGTTTCGCCAGTTTGTTGCAGAGCAGGGCGACAGCCTGTTCTGGCAGGCAGCCTTTGATGCGCTACATGCCCAGCAAGTGAAAGAGGACGAAATGCGCTGGGGCTGGCCTGCATGGCCAGAGATGTATCAGAACGTGGATTCACCAGAAGTGCGTCAGTTCTGCGAAGAACATCGTGATGACGTCGATTTTTATCTCTGGTTGCAGTGGCTGGCTTACAGCCAGTTTGCCGCCTGCTGGGAGATAAGCCAGGGCTATGAAATGCCGATTGGCTTGTATCGTGATCTGGCGGTTGGCGTAGCGGAAGGTGGGGCGGAAACCTGGTGTGACCGTGAACTATATTGCCTGAAAGCATCGGTTGGCGCGCCGCCGGATATCCTCGGCCCGTTGGGGCAGAACTGGGGATTACCGCCAATGGACCCGCATATCATCACCGCGCGTGCCTATGAACCGTTTATCGAGCTGTTGCGTGCCAATATGCAAAACTGCGGCGCATTACGAATTGACCATGTGATGTCGATGCTGCGTTTGTGGTGGATACCGTATGGCGAGACGGCAGATCAGGGCGCGTATGTTCACTATCCGGTGGATGATCTGCTCTCGATTCTGGCACTCGAAAGTAAACGTCATCGCTGTATGGTGATTGGTGAAGATCTCGGTACCGTACCGGTAGAGATTGTCGGTAAGCTGCGCAGCAGCGGTGTGTACTCTTACAAAGTGCTCTATTTCGAAAACGACCACGAGAAGACGTTCCGTGCACCGAAAGCGTATCCGGAGCAGTCGATGGCGGTTGCGGCGACACATGACCTGCCAACGCTGCGCGGTTACTGGGAGTGCGGGGATCTAACGCTGGGCAAAACCCTGGGGCTGTATCCGGATGAAGTGGTACTGCGCGGTCTGTATCAGGATCGCGAACTGGCGAAGCAAGGGCTGCTGGATGCACTGCATAAATATGGTTGTCTGCCGAAACGTGCCGGGCATAAGGCATCGTTGATGTCGATGACGCCGACGCTGAACCGTGGTTTGCAGCGCTACATTGCCGACAGTAACAGTGCTCTGTTAGGACTACAGCCGGAAGACTGGCTGGATATGGCCGAACCGGTGAATATTCCTGGCACCAGTTACCAGTATAAAAACTGGCGACGCAAGCTTTCCGCAACGCTTGAGTCGATGTTTGCCGATGATGGCGTGAACAAGTTGCTGAAGGATTTGGACAGACGGCGCAGAGCTGCAGCGAAGAAGAAGTAG", 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"MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQRTATKVAVTPVPNVMVYTSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPTKLPEGYHTLTLTQDDQRAHCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWGIGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNAVEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDEQMAAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFCEEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDRELYCLKASVGAPPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHVMSMLRLWWIPYGETADQGAYVHYPVDDLLSILALESKRHRCMVIGEDLGTVPVEIVGKLRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWECGDLTLGKTLGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRYIADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLESMFADDGVNKLLKDLDRRRRAAAKKK", - "protein_translation_length": 694, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947922" - ], - [ - "gene_synonym", - "b3417" - ], - [ - "gene_synonym", - "YP_026218.1" - ], - [ - "gene_synonym", - "blu" - ], - [ - "gene_synonym", - "malP" - ], - [ - "gene_synonym", - "GI:49176351" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00490" - ], - [ - "gene_synonym", - "EcoGene:EG10560" - ], - [ - "gene_synonym", - "ASAP:ABE-0011154" - ], - [ - "gene_synonym", - "JW5689" - ], - [ - "gene_synonym", - "ECK3404" - ], - [ - "gene_synonym", - "malA" - ] - ], - "dna_sequence": "ATGTCACAACCTATTTTTAACGATAAGCAATTTCAGGAAGCGCTTTCACGTCAGTGGCAGCGTTATGGCTTAAATTCTGCGGCTGAAATGACTCCTCGCCAGTGGTGGCTAGCAGTGAGTGAAGCACTGGCCGAAATGCTGCGTGCTCAGCCATTCGCCAAGCCGGTGGCGAATCAGCGACATGTTAACTACATCTCAATGGAGTTTTTGATTGGTCGCCTGACGGGCAACAACCTGTTGAATCTCGGCTGGTATCAGGATGTACAGGATTCGTTGAAGGCTTATGACATCAATCTGACGGACCTGCTGGAAGAAGAGATCGACCCGGCGCTGGGTAACGGTGGTCTGGGACGTCTGGCGGCGTGCTTCCTCGACTCAATGGCAACTGTCGGTCAGTCTGCGACGGGTTACGGTCTGAACTATCAATATGGTTTGTTCCGCCAGTCTTTTGTCGATGGCAAACAGGTTGAAGCGCCGGATGACTGGCATCGCAGTAACTACCCGTGGTTCCGCCACAACGAAGCACTGGATGTGCAGGTAGGGATTGGCGGTAAAGTGACGAAAGACGGACGCTGGGAGCCGGAGTTTACCATTACCGGTCAAGCGTGGGATCTCCCCGTTGTCGGCTATCGTAATGGCGTGGCGCAGCCGCTGCGTCTGTGGCAGGCGACGCACGCGCATCCGTTTGATCTGACTAAATTTAACGACGGTGATTTCTTGCGTGCCGAACAGCAGGGCATCAATGCGGAAAAACTGACCAAAGTTCTCTATCCAAACGACAACCATACTGCCGGTAAAAAGCTGCGCCTGATGCAGCAATACTTCCAGTGTGCCTGTTCGGTAGCGGATATTTTGCGTCGCCATCATCTGGCGGGGCGTAAACTGCACGAACTGGCGGATTACGAAGTTATTCAGCTGAACGATACCCACCCAACTATCGCGATTCCAGAACTGCTGCGCGTGCTGATCGATGAGCACCAGATGAGCTGGGATGACGCCTGGGCCATTACCAGCAAAACTTTCGCTTACACCAACCATACCCTGATGCCAGAAGCGCTGGAACGCTGGGATGTGAAACTGGTGAAAGGCTTACTGCCGCGCCACATGCAGATTATTAACGAAATTAATACTCGCTTTAAAACGCTGGTAGAGAAAACCTGGCCGGGCGATGAAAAAGTGTGGGCCAAACTGGCGGTGGTGCACGACAAACAAGTGCATATGGCGAACCTGTGTGTGGTTGGCGGTTTCGCGGTGAACGGTGTTGCGGCGCTGCACTCGGATCTGGTGGTGAAAGATCTGTTCCCGGAATATCACCAGCTATGGCCGAACAAATTCCATAACGTCACCAACGGTATTACCCCACGTCGCTGGATCAAACAGTGCAACCCGGCACTGGCGGCTCTGTTGGATAAATCACTGCAAAAAGAGTGGGCTAACGATCTCGATCAGCTGATCAATCTGGAAAAATTCGCTGATGATGCGAAATTCCGTCAGCAATATCGCGAGATCAAGCAGGCGAATAAAGTCCGTCTGGCGGAGTTTGTGAAAGTTCGTACCGGTATTGAGATCAATCCACAGGCGATTTTCGATATTCAGATCAAACGTTTGCATGAGTACAAACGCCAGCACCTGAATCTGCTGCATATTCTGGCGTTGTACAAAGAAATTCGTGAAAACCCGCAGGCTGATCGCGTACCGCGCGTCTTCCTCTTCGGCGCGAAAGCGGCACCGGGCTACTACCTGGCGAAGAATATTATCTTTGCGATCAACAAAGTGGCTGACGTGATCAACAACGATCCGCTGGTTGGCGATAAGTTGAAGGTGGTGTTCCTGCCGGATTATTGCGTTTCGGCGGCGGAAAAACTGATCCCGGCGGCGGATATCTCCGAACAAATTTCGACTGCAGGTAAAGAAGCTTCCGGTACCGGCAATATGAAACTGGCGCTCAATGGTGCGCTTACTGTCGGTACGCTGGATGGGGCGAACGTTGAAATCGCCGAGAAAGTCGGTGAAGAAAATATCTTTATTTTTGGTCATACCGTGGAACAAGTGAAGGCAATTCTGGCCAAAGGCTACGACCCGGTGAAATGGCGGAAGAAAGATAAGGTGCTGGACGCAGTATTGAAAGAGCTGGAAAGCGGTAAATACAGCGACGGCGATAAGCATGCCTTCGACCAGATGCTGCACAGTATCGGCAAACAGGGCGGCGATCCGTATCTGGTGATGGCGGATTTCGCAGCCTATGTAGAGGCACAAAAGCAGGTGGATGTGCTGTACCGCGACCAGGAGGCCTGGACTCGCGCGGCGATCCTCAATACCGCCCGCTGCGGTATGTTTAGCTCGGATCGCTCTATTCGCGATTATCAGGCTCGTATCTGGCAGGCAAAACGCTAA", - "dna_sequence_length": 2394, - "functions": [ - "maltodextrin phosphorylase" - ], - "id": "CDS_3355", - "location": [ - [ - "NC_000913", - 3552473, - "-", - 2394 - ] - ], - "md5": "cfdf238a74279c4a179b44eff28eb0d0", - "parent_gene": "", - "protein_md5": "73f9cc844db1d636d0c25f1a7990353e", - "protein_translation": "MSQPIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPVANQRHVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR", - "protein_translation_length": 797, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947921" - ], - [ - "gene_synonym", - "ASAP:ABE-0011162" - ], - [ - "gene_synonym", - "ECK3405" - ], - [ - "gene_synonym", - "malT" - ], - [ - "gene_synonym", - "b3418" - ], - [ - "gene_synonym", - "GI:16131294" - ], - [ - "gene_synonym", - "EcoGene:EG10562" - ], - [ - "gene_synonym", - "malA" - ], - [ - "gene_synonym", - "JW3381" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06993" - ], - [ - "gene_synonym", - "NP_417877.1" - ] - ], - "dna_sequence": "ATGCTGATTCCGTCAAAACTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAGTGGGCGGCAGGCAAAAACGATATCGGCTGGTACTCGCTGGATGAAGGTGATAACCAGCAAGAGCGTTTCGCCAGCTATCTCATTGCCGCCGTGCAGCAGGCAACCAACGGTCACTGTGCGATATGTGAGACGATGGCGCAAAAACGGCAATATGCCAGCCTGACGTCACTCTTCGCCCAGCTTTTCATTGAGCTGGCGGAATGGCATAGCCCACTTTATCTGGTCATCGATGACTATCATCTGATCACTAATCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCAGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCCCTCATCACCCGTGTGACCGGCGAAGAAAACGGGCAAATGCGCCTCGAAGAGATTGAGCGTCAGGGGCTGTTTTTACAGCGGATGGATGATACCGGCGAGTGGTTCTGCTATCACCCGCTGTTTGGTAACTTCCTGCGCCAGCGCTGCCAGTGGGAACTGGCGGCGGAGCTGCCGGAAATCCACCGTGCCGCCGCAGAAAGCTGGATGGCCCAGGGATTTCCCAGCGAAGCAATTCATCATGCGCTGGCGGCAGGCGATGCGCTGATGCTGCGCGATATTCTGCTTAATCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGTTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGAGAAGACACCATGCACGCAGAATTTAACGCTCTGCGCGCCCAGGTGGCGATTAACGATGGTAATCCGGATGAAGCGGAACGGCTGGCAAAACTGGCACTGGAAGAGCTGCCGCCGGGCTGGTTCTATAGCCGCATTGTGGCAACCTCGGTGCTGGGTGAAGTGCTGCACTGCAAAGGCGAATTGACCCGCTCACTGGCGCTAATGCAGCAAACCGAACAGATGGCACGCCAGCACGATGTCTGGCACTACGCTTTGTGGAGTTTAATCCAGCAAAGTGAAATTCTGTTTGCCCAAGGGTTCCTGCAAACCGCGTGGGAAACGCAGGAAAAAGCATTCCAGCTGATCAACGAGCAGCATCTGGAACAGCTGCCAATGCATGAGTTTCTGGTGCGCATTCGTGCGCAGCTGTTATGGGCCTGGGCGCGGCTGGATGAAGCCGAAGCGTCGGCGCGTAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAAGTCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTTGATGAGCGATCTCAACCGTAACCTGTTGCTGCTTAATCAACTGTACTGGCAGGCCGGACGTAAAAGTGACGCCCAGCGCGTGTTGCTGGACGCATTAAAACTGGCGAATCGCACCGGATTTATCAGCCATTTTGTCATCGAAGGCGAAGCGATGGCGCAACAACTGCGTCAGCTGATTCAGCTTAATACGCTGCCGGAACTGGAACAGCATCGCGCGCAGCGTATTCTGCGAGAAATCAATCAACATCATCGGCATAAATTCGCCCATTTCGATGAGAATTTCGTTGAACGTCTGCTAAATCATCCTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAA", - "dna_sequence_length": 2706, - "functions": [ - "mal regulon transcriptional activator" - ], - "id": "CDS_3356", - "location": [ - [ - "NC_000913", - 3553085, - "+", - 2706 - ] - ], - "md5": "bfba302a0dda4eb32cab2c288034a7e0", - "parent_gene": "", - "protein_md5": "56b536cd02ed8a727acb9142344361a3", - "protein_translation": "MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYGKTTLISQWAAGKNDIGWYSLDEGDNQQERFASYLIAAVQQATNGHCAICETMAQKRQYASLTSLFAQLFIELAEWHSPLYLVIDDYHLITNPVIHESMRFFIRHQPENLTLVVLSRNLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRLSSPIEAAESSRICDDVSGWATALQLIALSARQNTHSAHKSARRLAGINASHLSDYLVDEVLDNVDLATRHFLLKSAILRSMNDALITRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFCYHPLFGNFLRQRCQWELAAELPEIHRAAAESWMAQGFPSEAIHHALAAGDALMLRDILLNHAWSLFNHSELSLLEESLKALPWDSLLENPQLVLLQAWLMQSQHRYGEVNTLLARAEHEIKDIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRILREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQREWQVLGLIYSGYSNEQIAGELEVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYGV", - "protein_translation_length": 901, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0174104" - ], - [ - "gene_synonym", - "b4475" - ], - [ - "gene_synonym", - "yhgJ" - ], - [ - "gene_synonym", - "yhgK" - ], - [ - "gene_synonym", - "YP_026219.1" - ], - [ - "gene_synonym", - "rtcA" - ], - [ - "gene_synonym", - "GI:49176352" - ], - [ - "gene_synonym", - "EcoGene:EG12938" - ], - [ - "gene_synonym", - "GeneID:2847707" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46849" - ], - [ - "gene_synonym", - "JW5688" - ], - [ - "gene_synonym", - "ECK3406" - ] - ], - "dna_sequence": "ATGAAAAGGATGATTGCGCTGGATGGCGCACAGGGCGAAGGTGGCGGGCAGATCCTGCGCTCGGCGCTGAGCCTGTCGATGATAACCGGCCAGCCATTTACCATCACCAGCATTCGTGCCGGGCGGGCGAAACCGGGGCTGTTGCGCCAGCATCTGACCGCGGTAAAGGCGGCGACGGAAATTTGCGGAGCAACCGTGGAAGGCGCGGAGCTGGGGTCGCAGCGTCTGCTCTTCCGGCCCGGCACCGTGCGCGGCGGCGATTACCGCTTTGCTATCGGTAGCGCCGGAAGTTGTACGCTGGTGCTGCAAACGGTGCTGCCCGCGCTGTGGTTTGCCGATGGACCTTCGCGTGTTGAAGTGAGCGGCGGCACCGATAACCCGTCGGCGCCGCCTGCGGATTTTATCCGCCGGGTGCTGGAGCCGCTGCTGGCGAAAATAGGAATTCATCAGCAAACCACGCTGTTACGCCACGGTTTTTACCCTGCCGGAGGCGGTGTGGTGGCAACGGAAGTCTCGCCCGTGGCATCGTTTAACACCTTGCAACTTGGCGAGCGCGGGAACATTGTGCAGATGCGTGGAGAAGTTCTATTAGCTGGTGTGCCGCGCCATGTTGCTGAGCGTGAAATCGCTACACTGGCGGGGAGTTTTTCCCTGCATGAACAGAATATTCATAACCTGCCGCGCGACCAGGGGCCGGGTAATACCGTCTCGCTTGAAGTCGAAAGTGAAAATATCACCGAACGCTTTTTTGTCGTCGGTGAAAAGCGCGTCAGTGCCGAGGTGGTTGCGGCACAGTTGGTGAAAGAGGTGAAACGCTACCTGGCAAGCACGGCGGCGGTGGGGGAATATCTTGCTGACCAACTGGTGCTACCGATGGCGCTGGCGGGCGCGGGGGAATTTACGGTCGCCCATCCCTCATGCCATCTGCTGACCAATATCGCGGTGGTGGAGCGTTTCTTGCCGGTGCGGTTTAGTTTGATAGAAACAGATGGCGTAACGCGGGTGAGCATTGAATGA", - "dna_sequence_length": 1017, - "functions": [ - "RNA 3'-terminal phosphate cyclase" - ], - "id": "CDS_3357", - "location": [ - [ - "NC_000913", - 3556849, - "-", - 1017 - ] - ], - "md5": "d250a328eb6f29cd4bf7b9ca2efcca85", - "parent_gene": "", - "protein_md5": "0022a6fb53681a7580a4d825014021f4", - "protein_translation": "MKRMIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIETDGVTRVSIE", - "protein_translation_length": 338, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011170" - ], - [ - "gene_synonym", - "yhgL" - ], - [ - "gene_synonym", - "rtcB" - ], - [ - "gene_synonym", - "GeneID:947929" - ], - [ - "gene_synonym", - "b3421" - ], - [ - "gene_synonym", - "GI:16131295" - ], - [ - "gene_synonym", - "NP_417879.1" - ], - [ - "gene_synonym", - "EcoGene:EG12939" - ], - [ - "gene_synonym", - "JW3384" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46850" - ], - [ - "gene_synonym", - "ECK3407" - ] - ], - "dna_sequence": "ATGAATTACGAATTACTGACCACTGAAAATGCCCCGGTAAAAATGTGGACCAAAGGCGTGCCGGTAGAGGCCGATGCGCGTCAGCAACTTATTAATACGGCGAAGATGCCGTTTATTTTCAAACATATTGCGGTAATGCCTGATGTACACCTGGGTAAAGGTTCCACCATTGGTAGCGTGATCCCGACCAAAGGGGCGATTATTCCGGCGGCGGTGGGCGTGGATATTGGCTGTGGAATGAACGCGCTGCGTACCGCGTTAACGGCGGAAGACCTGCCTGAAAACCTGGCAGAGCTGCGTCAGGCGATTGAAACGGCCGTGCCGCACGGGCGTACCACTGGCCGTTGTAAACGTGATAAAGGTGCCTGGGAAAATCCACCTGTTAACGTCGATGCTAAATGGGCTGAGCTTGAAGCCGGTTATCAGTGGTTAACGCAAAAATATCCCCGTTTCCTGAATACCAATAACTATAAACACCTGGGAACGCTGGGAACCGGTAACCACTTTATTGAAATCTGCCTTGATGAGTCGGACCAGGTGTGGATTATGCTGCACTCCGGTTCACGCGGAATTGGTAACGCCATCGGGACTTACTTTATCGATCTGGCACAAAAAGAGATGCAGGAAACGCTTGAGACGTTGCCGTCGCGTGATCTGGCGTACTTTATGGAAGGTACGGAATACTTTGATGATTACCTGAAAGCCGTGGCCTGGGCGCAGCTTTTTGCCAGCCTTAACCGCGATGCGATGATGGAAAACGTGGTAACGGCATTGCAGAGCATTACGCAGAAAACGGTCAGACAGCCACAAACGCTGGCGATGGAAGAGATCAACTGTCACCACAACTATGTGCAAAAAGAACAGCACTTTGGTGAAGAGATCTACGTGACGCGTAAAGGCGCGGTGTCTGCGCGTGCTGGTCAATATGGAATTATTCCCGGTTCGATGGGAGCAAAAAGCTTTATCGTCCGTGGGCTGGGAAATGAAGAGTCGTTCTGTTCGTGCAGCCACGGTGCCGGGCGGGTAATGAGCCGAACTAAAGCGAAAAAACTGTTCAGCGTGGAAGATCAAATTCGTGCCACCGCGCATGTGGAATGCCGTAAAGATGCCGAAGTGATCGACGAAATCCCGATGGCGTATAAAGATATTGATGCGGTGATGGCGGCACAAAGCGATCTGGTGGAAGTTATCTATACCCTGCGTCAGGTGGTGTGCGTAAAAGGATAA", - "dna_sequence_length": 1227, - "functions": [ - "RNA-splicing ligase" - ], - "id": "CDS_3358", - "location": [ - [ - "NC_000913", - 3558079, - "-", - 1227 - ] - ], - "md5": "6c67854dc9ab00fc4df4a83704af23eb", - "parent_gene": "", - "protein_md5": "8520236d05a6afc2774df1b44cc8a47f", - "protein_translation": "MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQAIETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQLFASLNRDAMMENVVTALQSITQKTVRQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMAAQSDLVEVIYTLRQVVCVKG", - "protein_translation_length": 408, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011174" - ], - [ - "gene_synonym", - "GI:16131296" - ], - [ - "gene_synonym", - "GeneID:947928" - ], - [ - "gene_synonym", - "yhgB" - ], - [ - "gene_synonym", - "b3422" - ], - [ - "gene_synonym", - "EcoGene:EG12356" - ], - [ - "gene_synonym", - "ECK3408" - ], - [ - "gene_synonym", - "NP_417880.1" - ], - [ - "gene_synonym", - "JW3385" - ], - [ - "gene_synonym", - "rtcR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P38035" - ] - ], - "dna_sequence": "ATGCGTAAAACAGTGGCTTTTGGCTTTGTCGGTACCGTACTGGATTATGCCGGGCGCGGCAGTCAGCGCTGGTCAAAATGGCGTCCGACACTCTGTTTATGCCAGCAAGAATCGTTGGTCATCGATCGACTGGAATTGTTGCACGACGCCCGCTCGCGCTCGCTATTTGAAACGCTTAAACGCGATATCGCCAGCGTTTCGCCAGAAACAGAAGTGGTGAGCGTTGAGATTGAACTGCATAACCCGTGGGATTTCGAAGAGGTCTACGCCTGCCTGCATGATTTCGCCCGTGGTTACGAGTTTCAGCCAGAAAAAGAAGACTATTTAATTCACATCACCACCGGTACCCACGTCGCGCAGATTTGCTGGTTTCTGCTGGCAGAAGCGCGTTACCTGCCCGCCCGGCTGATACAATCTTCACCTCCGCGCAAAAAAGAACAGCCGCGCGGCCCAGGTGAAGTAACGATTATCGATCTCGATTTAAGCCGTTATAACGCCATCGCCAGCCGCTTTGCCGAGGAACGCCAGCAAACGCTTGATTTTCTTAAGTCCGGCATTGCCACGCGTAACCCCCACTTCAACCGCATGATTGAGCAGATCGAAAAAGTGGCGATCAAATCCCGCGCGCCGATTCTGCTTAACGGTCCAACCGGCGCGGGCAAGTCATTTCTGGCGCGACGCATCTTAGAGTTAAAACAGGCGCGGCATCAGTTTAGCGGCGCGTTTGTGGAAGTGAACTGCGCCACCCTGCGCGGCGATACCGCCATGTCGACGCTGTTTGGTCATGTAAAAGGCGCGTTTACCGGGGCGCGGGAATCTCGTGAAGGTTTATTACGCAGCGCCAACGGCGGAATGTTGTTTCTTGATGAGATTGGCGAACTGGGCGCAGACGAACAGGCAATGCTGCTGAAAGCCATTGAAGAGAAAACCTTTTACCCGTTTGGCAGCGATCGCCAGGTGAGCAGTGATTTTCAGCTTATCGCCGGAACGGTGCGCGATTTGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCGCCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGCGGCGCGCCTGGTTGGCTTTTGCGACCTCTCCCCAGGCAACATGGCGCGGTAACTTTCGCGAACTTTCTGCCAGCGTCACGCGGATGGCCACCTTTGCCACTAGCGGACGCATCACTCTGGACGTGGTTGAAGATGAGATAAACCGTCTGCGCTATAACTGGCAGGAGAGCCGCCCCTCCGCGCTTACGGCGTTGCTGGGCGCAGAGGCAGAAAACATCGATCTCTTCGACCGTATGCAACTGGAACACGTTATCGCTATCTGCCGCCAGGCAAAGTCGCTTTCCGCAGCCGGACGCCAGCTTTTTGACGTTTCGCGCCAGGGCAAAGCCAGCGTCAATGACGCGGATCGGCTACGCAAATACCTGGCGCGTTTTGGTCTGACGTGGGAAGCCGTGCAGGATCAGCACAGCTCCAGTTGA", - "dna_sequence_length": 1599, - "functions": [ - "sigma 54-dependent transcriptional regulator of rtcBA expression" - ], - "id": "CDS_3359", - "location": [ - [ - "NC_000913", - 3558268, - "+", - 1599 - ] - ], - "md5": "10d3b76d2e130806b3e2c80b2a495e07", - "parent_gene": "", - "protein_md5": "fe2173d336f7a3424ce24c1189e1e031", - "protein_translation": "MRKTVAFGFVGTVLDYAGRGSQRWSKWRPTLCLCQQESLVIDRLELLHDARSRSLFETLKRDIASVSPETEVVSVEIELHNPWDFEEVYACLHDFARGYEFQPEKEDYLIHITTGTHVAQICWFLLAEARYLPARLIQSSPPRKKEQPRGPGEVTIIDLDLSRYNAIASRFAEERQQTLDFLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRILELKQARHQFSGAFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGKFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVTRMATFATSGRITLDVVEDEINRLRYNWQESRPSALTALLGAEAENIDLFDRMQLEHVIAICRQAKSLSAAGRQLFDVSRQGKASVNDADRLRKYLARFGLTWEAVQDQHSSS", - "protein_translation_length": 532, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011176" - ], - [ - "gene_synonym", - "glpR" - ], - [ - "gene_synonym", - "b3423" - ], - [ - "gene_synonym", - "ECK3409" - ], - [ - "gene_synonym", - "GeneID:947926" - ], - [ - "gene_synonym", - "JW3386" - ], - [ - "gene_synonym", - "EcoGene:EG10400" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACL0" - ] - ], - "dna_sequence": "ATGAAACAAACACAACGTCACAACGGTATTATCGAACTGGTTAAACAGCAGGGTTATGTCAGTACCGAAGAGCTGGTAGAGCATTTCTCCGTCAGCCCGCAGACTATTCGCCGCGACCTCAATGAGCTGGCGGAGCAAAACCTGATCCTGCATCATGGCGGTGCGGCGCTGCCTTCCAGTTCGGTTAACACGCCGTGGCACGATCGCAAGGCCACCCAGACCGAAGAAAAAGAGCGCATCGCCCGCAAAGTGGCGGAGCAAATCCCCAATGGCTCGACGCTGTTTATCGATATCGGCACCACGCCGGAAGCGGTAGCGCACGCACTGCTCAATCACAGCAATTTGCGCATTGTCACCAACAATCTCAACGTTGCTAACACGTTGATGGTAAAAGAAGATTTTCGCATCATTCTCGCCGGTGGCGAATTACGCAGCCGCGATGGCGGGATCATTGGCGAAGCGACGCTCGATTTTATCTCCCAGTTCCGCCTTGATTTCGGCATTCTGGGGATAAGCGGCATCGATAGCGACGGCTCGCTGCTGGAGTTCGATTACCACGAAGTTCGCACCAAACGCGCCATTATTGAGAACTCGCGCCACGTTATGCTGGTTGTCGATCACTCGAAATTTGGCCGTAACGCGATGGTCAATATGGGCAGCATCAGCATGGTAGATGCCGTCTACACCGACGCCCCGCCGCCAGTAAGCGTGATGCAGGTGCTGACGGACCACCATATTCAACTGGAGCTGTGCTGA", - "dna_sequence_length": 756, - "id": "CDS_3360", - "location": [ - [ - "NC_000913", - 3560605, - "-", - 150 - ], - [ - "NC_000913", - 3560453, - "-", - 606 - ] - ], - "md5": "1bc7573643b062180c838927ba8bc930", - "parent_gene": "", - "protein_md5": "b38c65d9713896d041c2ad3c1cc3b8c0", - "protein_translation": "MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELAEQNLILHHGGAALPSSSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTTPEAVAHALLNHSNLRIVTNNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFISQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVNMGSISMVDAVYTDAPPPVSVMQVLTDHHIQLELC", - "protein_translation_length": 251, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3410" - ], - [ - "gene_synonym", - "GeneID:947936" - ], - [ - "gene_synonym", - "b3424" - ], - [ - "gene_synonym", - "ASAP:ABE-0011179" - ], - [ - "gene_synonym", - "GI:49176353" - ], - [ - "gene_synonym", - "glpG" - ], - [ - "gene_synonym", - "JW5687" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09391" - ], - [ - "gene_synonym", - "YP_026220.1" - ], - [ - "gene_synonym", - "EcoGene:EG10397" - ] - ], - "dna_sequence": "ATGTTGATGATTACCTCTTTTGCTAACCCCCGCGTGGCGCAGGCGTTTGTTGATTACATGGCGACGCAGGGTGTTATCCTCACGATTCAACAACATAACCAAAGCGATGTCTGGCTGGCGGATGAGTCCCAGGCCGAGCGCGTACGGGCGGAGCTGGCGCGTTTTCTCGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGGTCCGGTAACCTGGGTGATGATGATCGCCTGCGTGGTGGTGTTTATTGCCATGCAAATTCTCGGCGATCAGGAAGTGATGTTATGGCTGGCCTGGCCATTCGATCCAACACTGAAATTTGAGTTCTGGCGTTACTTCACCCACGCGTTAATGCACTTCTCGCTGATGCATATCCTCTTTAACCTGCTCTGGTGGTGGTATCTCGGCGGTGCGGTGGAAAAACGCCTCGGTAGCGGTAAGCTAATTGTCATTACGCTTATCAGCGCCCTGTTAAGCGGCTATGTGCAGCAAAAATTCAGCGGGCCGTGGTTTGGCGGGCTTTCTGGCGTGGTGTATGCGCTGATGGGCTACGTCTGGCTACGTGGCGAACGCGATCCGCAAAGTGGCATTTACCTGCAACGTGGGTTAATTATCTTTGCGCTGATCTGGATTGTCGCCGGATGGTTTGATTTGTTTGGGATGTCGATGGCGAACGGAGCACACATCGCCGGGTTAGCCGTGGGTTTAGCGATGGCTTTTGTTGATTCGCTCAATGCGCGAAAACGAAAATAA", - "dna_sequence_length": 831, - "functions": [ - "rhomboid intramembrane serine protease" - ], - "id": "CDS_3361", - "location": [ - [ - "NC_000913", - 3561452, - "-", - 831 - ] - ], - "md5": "d6f547e7b538a5435324e52627ea7f23", - "parent_gene": "", - "protein_md5": "520074778e96358cf1772adade6b56c2", - "protein_translation": "MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDVWLADESQAERVRAELARFLENPADPRYLAASWQAGHTGSGLHYRRYPFFAALRERAGPVTWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK", - "protein_translation_length": 276, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131299" - ], - [ - "gene_synonym", - "GeneID:947935" - ], - [ - "gene_synonym", - "ECK3411" - ], - [ - "gene_synonym", - "b3425" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6V5" - ], - [ - "gene_synonym", - "glpE" - ], - [ - "gene_synonym", - "JW3388" - ], - [ - "gene_synonym", - "ASAP:ABE-0011182" - ], - [ - "gene_synonym", - "NP_417883.1" - ], - [ - "gene_synonym", - "EcoGene:EG10395" - ] - ], - "dna_sequence": "ATGGATCAGTTCGAATGTATTAACGTTGCCGACGCGCACCAGAAGTTGCAGGAAAAAGAGGCGGTGCTGGTCGATATTCGCGATCCACAGAGTTTCGCAATGGGACATGCGGTGCAGGCTTTCCATTTAACCAACGACACGCTGGGCGCTTTTATGCGTGATAACGACTTTGACACTCCGGTGATGGTGATGTGTTATCACGGCAATAGCAGCAAAGGCGCGGCGCAGTATCTGCTGCAACAGGGCTACGATGTGGTCTATAGCATTGACGGCGGCTTTGAAGCCTGGCAACGTCAGTTTCCCGCAGAGGTGGCGTACGGCGCGTAA", - "dna_sequence_length": 327, - "functions": [ - "thiosulfate:cyanide sulfurtransferase (rhodanese)" - ], - "id": "CDS_3362", - "location": [ - [ - "NC_000913", - 3561823, - "-", - 327 - ] - ], - "md5": "c5419d561b9baf7b46ff92adaf1c0ad5", - "parent_gene": "", - "protein_md5": "63e1eaf319be5966e65f1807faa39795", - "protein_translation": "MDQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPAEVAYGA", - "protein_translation_length": 108, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P13035" - ], - [ - "gene_synonym", - "ECK3412" - ], - [ - "gene_synonym", - "GeneID:947934" - ], - [ - "gene_synonym", - "NP_417884.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011191" - ], - [ - "gene_synonym", - "b3426" - ], - [ - "gene_synonym", - "glpD" - ], - [ - "gene_synonym", - "JW3389" - ], - [ - "gene_synonym", - "glyD" - ], - [ - "gene_synonym", - "GI:16131300" - ], - [ - "gene_synonym", - "EcoGene:EG10394" - ] - ], - "dna_sequence": "ATGGAAACCAAAGATCTGATTGTGATAGGGGGCGGCATCAATGGTGCTGGTATCGCGGCAGACGCCGCTGGACGCGGTTTATCCGTGCTGATGCTGGAGGCGCAGGATCTCGCTTGCGCGACCTCTTCCGCCAGTTCAAAACTCATTCACGGTGGCCTGCGCTACCTTGAGCACTATGAATTCCGCCTGGTCAGCGAGGCGCTGGCTGAACGTGAAGTGCTGCTGAAAATGGCCCCGCATATCGCCTTCCCGATGCGTTTTCGCCTGCCACATCGTCCGCATCTGCGCCCGGCGTGGATGATTCGCATTGGTCTGTTTATGTACGATCATCTGGGTAAACGCACCAGCTTGCCGGGATCAACTGGTTTGCGTTTTGGCGCAAATTCAGTGTTAAAACCGGAAATTAAGCGCGGATTCGAATATTCTGACTGTTGGGTAGACGACGCCCGTCTGGTACTCGCCAACGCCCAGATGGTGGTGCGTAAAGGCGGCGAAGTGCTTACTCGGACTCGCGCCACCTCTGCTCGCCGCGAAAACGGCCTGTGGATTGTGGAAGCGGAAGATATCGATACCGGCAAAAAATATAGCTGGCAAGCGCGCGGCTTGGTTAACGCCACCGGCCCGTGGGTGAAACAGTTCTTCGACGACGGGATGCATCTGCCTTCGCCTTATGGCATTCGCCTGATCAAAGGCAGCCATATTGTGGTGCCGCGCGTGCATACCCAGAAGCAAGCCTACATTCTGCAAAACGAAGATAAACGTATTGTGTTCGTGATCCCGTGGATGGACGAGTTTTCCATCATCGGCACTACCGATGTCGAGTACAAAGGCGATCCGAAAGCGGTGAAGATTGAAGAGAGTGAAATCAATTACCTGCTGAATGTGTATAACACGCACTTTAAAAAGCAGTTAAGCCGTGACGATATCGTCTGGACCTACTCCGGTGTGCGTCCGCTGTGTGATGATGAGTCCGACTCGCCGCAGGCTATTACCCGTGATTACACCCTTGATATTCATGATGAAAATGGCAAAGCACCGCTGCTGTCGGTATTCGGCGGTAAGCTGACCACCTACCGAAAACTGGCGGAACATGCGCTGGAAAAACTAACGCCGTATTATCAGGGTATTGGCCCGGCATGGACGAAAGAGAGTGTGCTACCGGGTGGCGCCATTGAAGGCGACCGCGACGATTATGCCGCTCGCCTGCGCCGCCGCTATCCGTTCCTGACTGAATCGCTGGCGCGTCATTACGCTCGCACTTACGGCAGCAACAGCGAGCTGCTGCTCGGCAATGCGGGAACGGTAAGCGATCTCGGGGAAGATTTCGGTCATGAGTTCTACGAAGCGGAGCTGAAATACCTGGTGGATCACGAATGGGTCCGCCGCGCCGACGACGCCCTGTGGCGTCGCACAAAACAAGGCATGTGGCTAAATGCGGATCAACAATCTCGTGTGAGTCAGTGGCTGGTGGAGTATACGCAGCAGAGGTTATCGCTGGCGTCGTAA", 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"gene_synonym", - "ECK3413" - ], - [ - "gene_synonym", - "b3427" - ], - [ - "gene_synonym", - "ASAP:ABE-0011194" - ], - [ - "gene_synonym", - "yzgL" - ], - [ - "gene_synonym", - "EcoGene:EG14434" - ], - [ - "gene_synonym", - "JW3390" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76692" - ] - ], - "dna_sequence": "ATGCAAAACAGAAAATGGATTTTGACCTCGCTGGTAATGACTTTTTTCGGCATCCCCATACTGGCGCAATTTTTGGCGGTGGTTATTGCCATGCTGGGTGTCGGACTTGCCGGTATTATTGAAGTTTGTAATATCCTTATCACGCCAACAATTTACCTTCTGCTCAAAATTTTTATGCTGGCGCTGGGCGCATTAATGCTATTTTTCTCGGGGCGAGTG", - "dna_sequence_length": 219, - "id": "CDS_3364", - "location": [ - [ - "NC_000913", - 3564005, - "-", - 219 - ] - ], - "md5": "68920371a37481a404dd03b233e55152", - "parent_gene": "", - "protein_md5": "3453b5d15210162f10ce19d01f779367", - "protein_translation": "MQNRKWILTSLVMTFFGIPILAQFLAVVIAMLGVGLAGIIEVCNILITPTIYLLLKIFMLALGALMLFFSGRV", - "protein_translation_length": 73, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011198" - ], - [ - "gene_synonym", - "GeneID:947931" - ], - [ - "gene_synonym", - "ECK3414" - ], - [ - "gene_synonym", - "NP_417886.1" - ], - [ - "gene_synonym", - "b3428" - ], - [ - "gene_synonym", - "GI:16131302" - ], - [ - "gene_synonym", - "glgP" - ], - [ - "gene_synonym", - "EcoGene:EG10380" - ], - [ - "gene_synonym", - "glgY" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC86" - ], - [ - "gene_synonym", - "JW3391" - ] - ], - "dna_sequence": "ATGAATGCTCCGTTTACATATTCATCGCCCACGCTTAGCGTAGAAGCTCTTAAGCACTCTATCGCTTACAAGCTGATGTTTACGATTGGAAAGGACCCGGTCGTCGCCAATAAACATGAATGGCTGAACGCAACGTTATTTGCTGTGCGCGATCGTCTCGTGGAGCGCTGGTTACGTTCAAACCGTGCCCAGTTGTCGCAAGAAACTCGTCAGGTTTACTACCTGTCGATGGAGTTTTTGATTGGCCGTACGCTCTCCAACGCCATGTTGTCGCTAGGAATTTACGAAGATGTACAGGGCGCACTGGAAGCGATGGGGTTAAATCTCGAAGAGCTGATTGATGAAGAAAATGACCCAGGCCTCGGTAACGGTGGCCTGGGACGTCTGGCGGCTTGCTTCCTTGATTCTCTGGCGACGTTAGGGTTGCCGGGGCGCGGTTACGGCATCCGCTATGACTACGGTATGTTCAAGCAGAACATCGTTAACGGTAGCCAGAAAGAGTCGCCAGACTACTGGCTGGAATACGGTAACCCGTGGGAATTCAAACGCCACAACACGCGCTATAAAGTCCGTTTTGGCGGTCGCATTCAGCAGGAAGGTAAAAAAACGCGCTGGATTGAAACCGAAGAGATTCTGGGAGTCGCTTACGATCAGATAATCCCTGGTTACGACACCGACGCGACCAACACGCTGCGTTTGTGGAGTGCGCAAGCCAGTAGCGAAATTAACCTCGGTAAATTCAACCAGGGTGACTACTTCGCGGCAGTGGAAGATAAAAACCACTCCGAGAACGTATCTCGCGTACTGTATCCGGATGACTCCACCTACTCCGGGCGTGAGCTGCGCCTGCGTCAGGAATACTTCCTGGTTTCCTCGACCATTCAGGACATTTTAAGCCGCCATTATCAGTTGCATAAAACCTACGATAACCTGGCGGATAAAATCGCGATTCATCTCAATGATACCCATCCGGTACTGTCGATTCCTGAGATGATGCGTCTGCTGATCGATGAGCACCAATTTAGCTGGGACGACGCGTTTGAGGTGTGTTGTCAGGTCTTCTCCTACACTAACCACACGCTGATGAGCGAGGCGCTGGAAACCTGGCCGGTTGATATGCTGGGTAAAATTCTGCCGCGTCACCTGCAGATCATCTTTGAAATCAACGACTATTTCCTGAAAACCTTGCAGGAACAGTATCCGAACGATACCGATCTGCTGGGACGGGCGTCGATCATTGATGAATCCAACGGTCGTCGTGTGCGTATGGCCTGGCTGGCGGTTGTTGTGAGCCACAAAGTTAACGGTGTATCGGAACTGCACTCTAATCTGATGGTGCAATCGTTGTTTGCCGACTTTGCGAAAATCTTCCCGGGTCGTTTCACCAACGTCACCAACGGTGTGACGCCGCGTCGCTGGCTGGCGGTAGCGAACCCATCGCTTTCAGCCGTGCTGGACGAACACCTGGGCCGTAACTGGCGCACCGACCTTAGCCTGCTTAATGAGCTGCAACAACACTGTGATTTCCCAATGGTTAATCACGCTGTGCATCAGGCGAAGCTGGAGAACAAAAAGCGTCTGGCAGAGTATATCGCCCAGCAGCTGAATGTGGTGGTGAATCCAAAGGCGTTGTTCGATGTACAAATCAAACGTATTCACGAATACAAACGTCAATTGATGAATGTGTTGCATGTGATTACCCGCTATAACCGCATCAAGGCCGACCCGGATGCGAAGTGGGTACCGCGCGTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCATTTGATCAATGACGTAGCGAAAGTGATCAACAACGATCCGCAGATTGGCGATAAGCTGAAAGTCGTGTTCATCCCGAACTACAGCGTTAGCCTGGCGCAGTTGATCATTCCGGCGGCAGATCTGTCTGAACAGATTTCGCTGGCAGGGACGGAAGCTTCCGGCACCAGTAACATGAAGTTTGCGCTTAACGGTGCGCTGACTATCGGTACGTTGGACGGTGCGAATGTCGAGATGCTGGATCATGTCGGTGCTGACAATATCTTTATTTTTGGTAACACAGCGGAAGAAGTGGAAGAACTGCGTCGTCAGGGCTACAAACCGCGTGAATACTACGAGAAAGATGAGGAGCTGCATCAGGTGCTGACGCAAATCGGCAGCGGTGTATTCAGTCCGGAAGATCCGGGTCGCTATCGCGATCTGGTTGATTCGCTGATCAACTTCGGCGATCACTACCAGGTACTGGCGGATTATCGCAGCTATGTCGATTGTCAGGATAAAGTCGATGAACTCTACGAGCTTCAGGAAGAGTGGACCGCAAAAGCGATGCTGAACATTGCCAATATGGGCTACTTCTCTTCTGACCGTACTATCAAAGAGTACGCCGATCATATCTGGCATATCGATCCGGTGAGATTGTAA", - "dna_sequence_length": 2448, - "functions": [ - "glycogen phosphorylase" - ], - "id": "CDS_3365", - "location": [ - [ - "NC_000913", - 3566581, - "-", - 2448 - ] - ], - "md5": "bbb22aeaabf2d40cf5251b242b62825c", - "parent_gene": "", - "protein_md5": "7db619436cc0d6bd65e97e46e4f5de58", - "protein_translation": "MNAPFTYSSPTLSVEALKHSIAYKLMFTIGKDPVVANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNAMLSLGIYEDVQGALEAMGLNLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGSQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILGVAYDQIIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSSTIQDILSRHYQLHKTYDNLADKIAIHLNDTHPVLSIPEMMRLLIDEHQFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFTNVTNGVTPRRWLAVANPSLSAVLDEHLGRNWRTDLSLLNELQQHCDFPMVNHAVHQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLDHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDRTIKEYADHIWHIDPVRL", - "protein_translation_length": 815, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "glgA" - ], - [ - "gene_synonym", - "ECK3415" - ], - [ - "gene_synonym", - "b3429" - ], - [ - "gene_synonym", - "NP_417887.1" - ], - [ - "gene_synonym", - "GI:16131303" - ], - [ - "gene_synonym", - "EcoGene:EG10377" - ], - [ - "gene_synonym", - "GeneID:947932" - ], - [ - "gene_synonym", - "ASAP:ABE-0011200" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6U8" - ], - [ - "gene_synonym", - "JW3392" - ] - ], - "dna_sequence": "ATGCAGGTTTTACATGTATGTTCAGAGATGTTCCCGCTGCTTAAAACCGGCGGTCTGGCTGATGTTATTGGGGCATTACCCGCAGCACAAATCGCAGACGGCGTTGACGCTCGCGTACTGTTGCCTGCATTTCCCGATATTCGCCGTGGCGTGACCGATGCGCAGGTAGTATCCCGTCGTGATACCTTCGCCGGACATATCACGCTGTTGTTCGGTCATTACAACGGGGTTGGCATTTACCTGATTGACGCGCCGCATCTCTATGATCGTCCGGGAAGCCCGTATCACGATACCAACTTATTTGCCTATACCGACAACGTATTGCGTTTTGCGCTGCTGGGGTGGGTTGGGGCAGAAATGGCCAGCGGGCTTGACCCATTCTGGCGTCCTGATGTGGTGCATGCGCACGACTGGCATGCAGGCCTTGCGCCTGCGTATCTGGCGGCGCGCGGGCGTCCGGCGAAGTCGGTGTTTACTGTGCACAACCTGGCCTATCAAGGCATGTTTTATGCACATCACATGAATGACATCCAATTGCCATGGTCATTCTTTAATATTCATGGGCTGGAATTCAACGGACAAATCTCTTTCCTGAAGGCCGGTCTGTACTATGCCGATCACATTACGGCGGTCAGTCCAACCTACGCTCGCGAGATCACCGAACCGCAGTTTGCCTACGGTATGGAAGGTCTGTTGCAACAGCGTCACCGTGAAGGGCGTCTTTCCGGCGTACTGAACGGCGTGGACGAGAAAATCTGGAGTCCAGAGACGGACTTACTGTTGGCCTCGCGTTACACCCGCGATACGTTGGAAGATAAAGCGGAAAATAAGCGCCAGTTACAAATCGCAATGGGGCTTAAGGTTGACGATAAAGTGCCGCTTTTTGCAGTGGTGAGCCGTCTGACCAGCCAGAAAGGTCTCGACCTGGTGCTGGAAGCCTTACCGGGTCTTCTGGAGCAGGGCGGGCAGCTGGCGCTACTCGGCGCGGGCGATCCGGTGCTGCAGGAAGGTTTCCTTGCGGCGGCAGCGGAATACCCCGGTCAGGTGGGCGTTCAGATTGGCTATCACGAAGCATTTTCGCATCGCATTATGGGCGGCGCGGACGTCATTCTGGTGCCCAGCCGTTTTGAACCGTGCGGCTTAACGCAACTTTATGGATTGAAGTACGGTACGCTGCCGTTAGTGCGGCGCACCGGTGGGCTTGCTGATACGGTTTCTGACTGTTCTCTTGAGAACCTTGCAGATGGCGTCGCCAGTGGGTTTGTCTTTGAAGATAGTAATGCCTGGTCGCTGTTACGGGCTATTCGACGTGCTTTTGTACTGTGGTCCCGTCCTTCACTGTGGCGGTTTGTGCAACGTCAGGCTATGGCAATGGATTTTAGCTGGCAGGTCGCGGCGAAGTCGTACCGTGAGCTTTACTATCGCTTGAAATAG", - "dna_sequence_length": 1434, - "functions": [ - "glycogen synthase" - ], - "id": "CDS_3366", - "location": [ - [ - "NC_000913", - 3568033, - "-", - 1434 - ] - ], - "md5": "d338653046b3873bccaacb7f289fc00b", - "parent_gene": "", - "protein_md5": "838205352281ee3792f39070eaba1e18", - "protein_translation": "MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK", - "protein_translation_length": 477, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3416" - ], - [ - "gene_synonym", - "GI:16131304" - ], - [ - "gene_synonym", - "glgC" - ], - [ - "gene_synonym", - "GeneID:947942" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6V1" - ], - [ - "gene_synonym", - "NP_417888.1" - ], - [ - "gene_synonym", - "b3430" - ], - [ - "gene_synonym", - "ASAP:ABE-0011204" - ], - [ - "gene_synonym", - "JW3393" - ], - [ - "gene_synonym", - "EcoGene:EG10379" - ] - ], - "dna_sequence": "ATGGTTAGTTTAGAGAAGAACGATCACTTAATGTTGGCGCGCCAGCTGCCATTGAAATCTGTTGCCCTGATACTGGCGGGAGGACGTGGTACCCGCCTGAAGGATTTAACCAATAAGCGAGCAAAACCGGCCGTACACTTCGGCGGTAAGTTCCGCATTATCGACTTTGCGCTGTCTAACTGCATCAACTCCGGGATCCGTCGTATGGGCGTGATCACCCAGTACCAGTCCCACACTCTGGTGCAGCACATTCAGCGCGGCTGGTCATTCTTCAATGAAGAAATGAACGAGTTTGTCGATCTGCTGCCAGCACAGCAGAGAATGAAAGGGGAAAACTGGTATCGCGGCACCGCAGATGCGGTCACCCAAAACCTCGACATTATCCGCCGTTATAAAGCGGAATACGTGGTGATCCTGGCGGGCGACCATATCTACAAGCAAGACTACTCGCGTATGCTTATCGATCACGTCGAAAAAGGCGCACGTTGCACCGTTGCTTGTATGCCAGTACCGATTGAAGAAGCCTCCGCATTTGGCGTTATGGCGGTTGATGAGAACGATAAAATTATCGAATTCGTTGAAAAACCTGCTAACCCGCCGTCAATGCCGAACGATCCGAGCAAATCTCTGGCGAGTATGGGTATCTACGTCTTTGACGCCGACTATCTGTATGAACTGCTGGAAGAAGACGATCGCGATGAGAACTCCAGCCACGACTTTGGCAAAGATTTGATTCCCAAGATCACCGAAGCCGGTCTGGCCTATGCGCACCCGTTCCCGCTCTCTTGCGTACAATCCGACCCGGATGCCGAGCCGTACTGGCGCGATGTGGGTACGCTGGAAGCTTACTGGAAAGCGAACCTCGATCTGGCCTCTGTGGTGCCGGAACTGGATATGTACGATCGCAATTGGCCAATTCGCACCTACAATGAATCATTACCGCCAGCGAAATTCGTGCAGGATCGCTCCGGTAGCCACGGGATGACCCTTAACTCACTGGTTTCCGGCGGTTGTGTGATCTCCGGTTCGGTGGTGGTGCAGTCCGTTCTGTTCTCGCGCGTTCGCGTGAATTCATTCTGCAACATTGATTCCGCCGTATTGTTACCGGAAGTATGGGTAGGTCGCTCGTGCCGTCTGCGCCGCTGCGTCATCGATCGTGCTTGTGTTATTCCGGAAGGCATGGTGATTGGTGAAAACGCAGAGGAAGATGCACGTCGTTTCTATCGTTCAGAAGAAGGCATCGTGCTGGTAACGCGCGAAATGCTACGGAAGTTAGGGCATAAACAGGAGCGATAA", - "dna_sequence_length": 1296, - "functions": [ - "glucose-1-phosphate adenylyltransferase" - ], - "id": "CDS_3367", - "location": [ - [ - "NC_000913", - 3569328, - "-", - 1296 - ] - ], - "md5": "a4f3862ec353572ac032e39e9d722da1", - "parent_gene": "", - "protein_md5": "f1dee98dc68e3f06069a54029dbd5aa2", - "protein_translation": "MVSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPPSMPNDPSKSLASMGIYVFDADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRDVGTLEAYWKANLDLASVVPELDMYDRNWPIRTYNESLPPAKFVQDRSGSHGMTLNSLVSGGCVISGSVVVQSVLFSRVRVNSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACVIPEGMVIGENAEEDARRFYRSEEGIVLVTREMLRKLGHKQER", - "protein_translation_length": 431, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417889.1" - ], - [ - "gene_synonym", - "ECK3417" - ], - [ - "gene_synonym", - "b3431" - ], - [ - "gene_synonym", - "GeneID:947941" - ], - [ - "gene_synonym", - "GI:16131305" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15067" - ], - [ - "gene_synonym", - "glgX" - ], - [ - "gene_synonym", - "JW3394" - ], - [ - "gene_synonym", - "EcoGene:EG10381" - ], - [ - "gene_synonym", - "ASAP:ABE-0011206" - ] - ], - "dna_sequence": "ATGACACAACTCGCCATTGGCAAACCCGCTCCCCTCGGCGCGCATTACGACGGTCAGGGCGTCAACTTCACACTTTTCTCCGCTCATGCCGAGCGGGTAGAACTGTGTGTCTTTGACGCCAATGGCCAGGAACATCGCTATGACTTGCCAGGGCACAGTGGCGACATTTGGCACGGTTATCTGCCGGATGCGCGCCCGGGTTTGCGTTATGGTTATCGCGTTCATGGCCCCTGGCAACCCGCCGAGGGGCATCGCTTTAACCCGGCGAAGTTGTTGATTGATCCTTGCGCGCGGCAAATTGACGGGGAGTTTAAAGATAACCCGCTGCTGCACGCCGGTCATAATGAACCTGACTATCGCGACAACGCCGCCATTGCGCCGAAATGCGTAGTGGTGGTTGATCACTATGACTGGGAAGATGATGCCCCGCCGCGCACGCCGTGGGGCAGCACCATCATTTATGAAGCCCATGTCAAAGGATTAACGTACTTGCACCCGGAGATCCCGGTCGAGATCCGTGGCACTTATAAAGCCCTCGGGCATCCGGTGATGATCAACTATTTGAAACAATTGGGCATTACCGCGCTGGAACTGCTGCCAGTGGCGCAGTTTGCCAGTGAACCACGTCTGCAACGCATGGGGCTAAGTAACTACTGGGGTTACAACCCGGTGGCGATGTTTGCGCTGCATCCGGCGTATGCCTGCTCGCCAGAAACGGCGCTGGATGAGTTTCGCGATGCAATCAAAGCACTGCATAAAGCGGGTATCGAAGTCATTCTTGATATCGTGCTCAACCATAGTGCGGAACTGGACCTCGACGGCCCGTTATTCTCGCTGCGTGGGATCGATAACCGTAGCTATTATTGGATAAGAGAAGACGGCGATTATCACAACTGGACCGGTTGCGGCAACACGCTCAATTTGAGTCATCCGGCGGTGGTGGATTATGCCAGCGCCTGCCTGCGTTATTGGGTAGAAACCTGCCACGTCGATGGTTTCCGCTTTGATCTGGCGGCAGTCATGGGCCGTACGCCAGAGTTCCGTCAGGATGCGCCGTTGTTTACCGCTATCCAGAACTGCCCGGTGCTCTCGCAGGTGAAGTTAATTGCTGAACCGTGGGATATCGCTCCTGGTGGTTATCAGGTGGGAAATTTCCCGCCGCTGTTTGCCGAGTGGAACGATCATTTCCGCGATGCTGCCCGTCGTTTCTGGCTACATTATGATTTGCCTCTGGGGGCGTTTGCCGGGCGTTTTGCTGCCTCCAGCGATGTTTTTAAACGTAATGGTCGTCTGCCGAGTGCCGCGATTAATCTCGTCACCGCGCATGACGGTTTTACGCTTCGCGACTGCGTTTGCTTCAACCATAAACACAATGAAGCAAACGGAGAAGAAAATCGCGACGGGACCAACAACAATTACAGTAACAATCATGGTAAAGAAGGGTTAGGCGGTTCTCTTGACCTGGTTGAACGGCGGCGCGACAGCATTCACGCCCTGTTAACAACGTTGTTGCTCTCCCAGGGTACGCCGATGTTACTGGCCGGTGACGAACATGGTCACAGCCAGCATGGCAATAACAATGCCTACTGTCAGGATAACCAATTAACCTGGTTGGACTGGTCGCAGGCAAGCAGTGGTTTAACCGCATTTACCGCCGCGTTAATCCATCTGCGCAAGCGCATTCCCGCTTTGGTGGAGAATCGCTGGTGGGAAGAAGGCGACGGCAATGTCCGTTGGCTAAATCGATATGCTCAACCTTTAAGCACGGATGAGTGGCAAAACGGGCCGAAACAGCTGCAAATTCTGCTCTCGGATCGCTTTTTGATCGCAATTAACGCCACGCTTGAGGTAACAGAGATTGTTTTACCTGCTGGGGAGTGGCACGCCATTCCCCCATTCGCTGGAGAGGATAACCCAGTGATTACGGCTGTCTGGCAGGGACCTGCACACGGATTGTGTGTGTTCCAGAGATGA", - "dna_sequence_length": 1974, - "functions": [ - "glycogen debranching enzyme" - ], - "id": "CDS_3368", - "location": [ - [ - "NC_000913", - 3571319, - "-", - 1974 - ] - ], - "md5": "4e984e6ac8d9b3f7874d20767cd45ead", - "parent_gene": "", - "protein_md5": "9200a015191de23ab4a1a9692e141366", - "protein_translation": "MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQEHRYDLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDGEFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKGLTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFRFDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEWNDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDCVCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQGTPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIVLPAGEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR", - "protein_translation_length": 657, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3432" - ], - [ - "gene_synonym", - "glgB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07762" - ], - [ - "gene_synonym", - "GeneID:947940" - ], - [ - "gene_synonym", - "GI:16131306" - ], - [ - "gene_synonym", - "ECK3418" - ], - [ - "gene_synonym", - "ASAP:ABE-0011209" - ], - [ - "gene_synonym", - "EcoGene:EG10378" - ], - [ - "gene_synonym", - "JW3395" - ], - [ - "gene_synonym", - "NP_417890.1" - ] - ], - "dna_sequence": "ATGTCCGATCGTATCGATAGAGACGTGATTAACGCGCTAATTGCAGGCCATTTTGCGGATCCTTTTTCCGTACTGGGAATGCATAAAACCACCGCGGGACTGGAAGTCCGTGCCCTTTTACCCGACGCTACCGATGTGTGGGTGATTGAACCGAAAACCGGGCGCAAACTCGCAAAACTGGAGTGTCTCGACTCACGGGGATTCTTTAGCGGCGTCATTCCGCGACGTAAGAATTTTTTCCGCTATCAGTTGGCTGTTGTCTGGCATGGTCAGCAAAACCTGATTGATGATCCTTACCGTTTTGGTCCGCTAATCCAGGAAATGGATGCCTGGCTATTATCTGAAGGTACTCACCTGCGCCCGTATGAAACCTTAGGCGCGCATGCAGATACTATGGATGGCGTCACAGGTACGCGTTTCTCTGTCTGGGCTCCAAACGCCCGTCGGGTCTCGGTGGTTGGGCAATTCAACTACTGGGACGGTCGCCGTCACCCGATGCGCCTGCGTAAAGAGAGCGGCATCTGGGAACTGTTTATCCCTGGGGCGCATAACGGTCAGCTCTATAAATACGAGATGATTGATGCCAATGGCAACTTGCGTCTGAAGTCCGACCCTTATGCCTTTGAAGCGCAAATGCGCCCGGAAACCGCGTCTCTTATTTGCGGGCTGCCGGAAAAGGTTGTACAGACTGAAGAGCGCAAAAAAGCGAATCAGTTTGATGCGCCAATCTCTATTTATGAAGTTCACCTGGGTTCCTGGCGTCGCCACACCGACAACAATTTCTGGTTGAGCTACCGCGAGCTGGCCGATCAACTGGTGCCTTATGCTAAATGGATGGGCTTTACCCACCTCGAACTACTGCCCATTAACGAGCATCCCTTCGATGGCAGTTGGGGTTATCAGCCAACCGGCCTGTATGCGCCAACCCGCCGTTTTGGTACTCGCGACGACTTCCGTTATTTCATTGATGCCGCACACGCAGCTGGTCTGAACGTGATTCTCGACTGGGTGCCAGGCCACTTCCCGACTGATGACTTTGCGCTTGCCGAATTTGATGGCACGAACTTGTATGAACACAGCGATCCGCGTGAAGGCTATCATCAGGACTGGAACACGCTGATCTACAACTATGGTCGCCGTGAAGTCAGTAACTTCCTCGTCGGTAACGCGCTTTACTGGATTGAACGTTTTGGTATTGATGCGCTGCGCGTCGATGCGGTGGCGTCAATGATTTATCGCGACTACAGCCGTAAAGAGGGGGAGTGGATCCCGAACGAATTTGGCGGGCGCGAGAATCTTGAAGCGATTGAATTCTTGCGTAATACCAACCGTATTCTTGGTGAGCAGGTTTCCGGTGCGGTGACAATGGCTGAGGAGTCTACCGATTTCCCTGGCGTTTCTCGTCCGCAGGATATGGGCGGTCTGGGCTTCTGGTACAAGTGGAACCTCGGCTGGATGCATGACACCCTGGACTACATGAAGCTCGACCCGGTTTATCGTCAGTATCATCACGATAAACTGACCTTCGGGATTCTCTACAACTACACTGAAAACTTCGTCCTGCCGTTGTCGCATGATGAAGTGGTCCACGGTAAAAAATCGATTCTCGACCGCATGCCGGGCGACGCATGGCAGAAATTCGCGAACCTGCGCGCCTACTATGGCTGGATGTGGGCATTCCCGGGCAAGAAACTACTGTTCATGGGTAACGAATTTGCCCAGGGCCGCGAGTGGAACCATGACGCCAGCCTCGACTGGCATCTGTTGGAAGGCGGCGATAACTGGCACCACGGTGTCCAGCGTCTGGTGCGCGATCTGAACCTCACCTACCGCCACCATAAAGCAATGCATGAACTGGATTTTGACCCGTACGGCTTTGAATGGCTGGTGGTGGATGACAAAGAACGCTCGGTGCTGATCTTTGTGCGTCGCGATAAAGAGGGTAACGAAATCATCGTTGCCAGTAACTTTACGCCGGTACCGCGTCATGATTATCGCTTCGGCATAAACCAGCCGGGCAAATGGCGTGAAATCCTCAATACCGATTCCATGCACTATCACGGCAGTAATGCAGGCAATGGCGGCACGGTACACAGCGATGAGATTGCCAGCCACGGTCGTCAGCATTCACTAAGCCTGACGCTACCACCGCTGGCCACTATCTGGCTGGTTCGGGAGGCAGAATGA", - "dna_sequence_length": 2187, - "functions": [ - "1,4-alpha-glucan branching enzyme" - ], - "id": "CDS_3369", - "location": [ - [ - "NC_000913", - 3573502, - "-", - 2187 - ] - ], - "md5": "59c5a3c967b2976ba897e034ae0ab43d", - "parent_gene": "", - "protein_md5": "e4686fc466af9047d254e77709e9fcd6", - "protein_translation": "MSDRIDRDVINALIAGHFADPFSVLGMHKTTAGLEVRALLPDATDVWVIEPKTGRKLAKLECLDSRGFFSGVIPRRKNFFRYQLAVVWHGQQNLIDDPYRFGPLIQEMDAWLLSEGTHLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPETASLICGLPEKVVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPYGFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTDSMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLATIWLVREAE", - "protein_translation_length": 728, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3433" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9Q9" - ], - [ - "gene_synonym", - "GI:16131307" - ], - [ - "gene_synonym", - "GeneID:947939" - ], - [ - "gene_synonym", - "hom" - ], - [ - "gene_synonym", - "ECK3419" - ], - [ - "gene_synonym", - "EcoGene:EG10088" - ], - [ - "gene_synonym", - "dap" - ], - [ - "gene_synonym", - "asd" - ], - [ - "gene_synonym", - "JW3396" - ], - [ - "gene_synonym", - "ASAP:ABE-0011211" - ], - [ - "gene_synonym", - "NP_417891.1" - ] - ], - "dna_sequence": "ATGAAAAATGTTGGTTTTATCGGCTGGCGCGGTATGGTCGGCTCCGTTCTCATGCAACGCATGGTTGAAGAGCGCGACTTCGACGCCATTCGCCCTGTCTTCTTTTCTACTTCTCAGCTTGGCCAGGCTGCGCCGTCTTTTGGCGGAACCACTGGCACACTTCAGGATGCCTTTGATCTGGAGGCGCTAAAGGCCCTCGATATCATTGTGACCTGTCAGGGCGGCGATTATACCAACGAAATCTATCCAAAGCTTCGTGAAAGCGGATGGCAAGGTTACTGGATTGACGCAGCATCGTCTCTGCGCATGAAAGATGACGCCATCATCATTCTTGACCCCGTCAATCAGGACGTCATTACCGACGGATTAAATAATGGCATCAGGACTTTTGTTGGCGGTAACTGTACCGTAAGCCTGATGTTGATGTCGTTGGGTGGTTTATTCGCCAATGATCTTGTTGATTGGGTGTCCGTTGCAACCTACCAGGCCGCTTCCGGCGGTGGTGCGCGACATATGCGTGAGTTATTAACCCAGATGGGCCATCTGTATGGCCATGTGGCAGATGAACTCGCGACCCCGTCCTCTGCTATTCTCGATATCGAACGCAAAGTCACAACCTTAACCCGTAGCGGTGAGCTGCCGGTGGATAACTTTGGCGTGCCGCTGGCGGGTAGCCTGATTCCGTGGATCGACAAACAGCTCGATAACGGTCAGAGCCGCGAAGAGTGGAAAGGGCAGGCGGAAACCAACAAGATCCTCAACACATCTTCCGTAATTCCGGTAGATGGTTTATGTGTGCGTGTCGGGGCATTGCGCTGCCACAGCCAGGCATTCACTATTAAATTGAAAAAAGATGTGTCTATTCCGACCGTGGAAGAACTGCTGGCTGCGCACAATCCGTGGGCGAAAGTCGTTCCGAACGATCGGGAAATCACTATGCGTGAGCTAACCCCAGCTGCCGTTACCGGCACGCTGACCACGCCGGTAGGCCGCCTGCGTAAGCTGAATATGGGACCAGAGTTCCTGTCAGCCTTTACCGTGGGCGACCAGCTGCTGTGGGGGGCCGCGGAGCCGCTGCGTCGGATGCTTCGTCAACTGGCGTAA", - "dna_sequence_length": 1104, - "functions": [ - "aspartate-semialdehyde dehydrogenase, NAD(P)-binding" - ], - "id": "CDS_3370", - "location": [ - [ - "NC_000913", - 3574878, - "-", - 1104 - ] - ], - "md5": "b3c2d7fe23eca6bf0c5db2c724ea7753", - "parent_gene": "", - "protein_md5": "6214d45ce9b8a0c398874acaee29688e", - "protein_translation": "MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIKLKKDVSIPTVEELLAAHNPWAKVVPNDREITMRELTPAAVTGTLTTPVGRLRKLNMGPEFLSAFTVGDQLLWGAAEPLRRMLRQLA", - "protein_translation_length": 367, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yhgN" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67143" - ], - [ - "gene_synonym", - "b3434" - ], - [ - "gene_synonym", - "NP_417892.1" - ], - [ - "gene_synonym", - "GI:16131308" - ], - [ - "gene_synonym", - "EcoGene:EG12941" - ], - [ - "gene_synonym", - "GeneID:947938" - ], - [ - "gene_synonym", - "JW3397" - ], - [ - "gene_synonym", - "ASAP:ABE-0011216" - ], - [ - "gene_synonym", - "ECK3420" - ] - ], - "dna_sequence": "ATGAATGAAATCATTTCTGCAGCAGTTTTATTGATCCTGATTATGGATCCGCTCGGAAACCTACCTATTTTCATGTCCGTACTGAAACATACTGAACCGAAAAGACGGCGGGCAATCATGGTGCGAGAGTTGCTTATTGCTCTCCTGGTGATGCTGGTGTTCCTGTTTGCGGGTGAGAAAATTCTGGCATTTCTTAGCCTACGAGCAGAAACCGTCTCCATTTCTGGCGGCATCATTCTGTTTCTGATCGCCATTAAAATGATTTTCCCCAGCGCTTCAGGAAATAGCAGCGGGCTTCCGGCAGGTGAAGAGCCATTTATCGTGCCGTTGGCAATTCCGTTAGTCGCCGGGCCGACTATTCTCGCCACGCTGATGTTGTTGTCTCATCAGTACCCGAATCAGATGGGGCATCTGGTGATTGCTCTGCTGCTGGCCTGGGGCGGCACCTTTGTCATCCTGCTACAGTCTTCGCTATTTTTACGTCTGCTGGGCGAGAAAGGGGTGAACGCACTTGAACGCCTGATGGGATTGATTCTGGTGATGATGGCAACCCAGATGTTCCTCGACGGCATTCGAATGTGGATGAAGGGGTAA", - "dna_sequence_length": 594, - "functions": [ - "UPF0056 family inner membrane protein" - ], - "id": "CDS_3371", - "location": [ - [ - "NC_000913", - 3575071, - "+", - 594 - ] - ], - "md5": "6f483b01c63cf4291e03531ceb7d1963", - "parent_gene": "", - "protein_md5": "ebb53170606a348b7e6b3f6c96c87a3b", - "protein_translation": "MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVRELLIALLVMLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAGEEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFLRLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG", - "protein_translation_length": 197, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4476" - ], - [ - "gene_synonym", - "ASAP:ABE-0174105" - ], - [ - "gene_synonym", - "YP_026221.1" - ], - [ - "gene_synonym", - "EcoGene:EG12631" - ], - [ - "gene_synonym", - "JW5686" - ], - [ - "gene_synonym", - "gntU" - ], - [ - "gene_synonym", - "GeneID:2847760" - ], - [ - "gene_synonym", - "GI:49176355" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC96" - ], - [ - "gene_synonym", - "ECK3421" - ] - ], - "dna_sequence": "GTGACTACATTAACGCTTGTTTTAACAGCAGTAGGGTCTGTTTTACTGCTGCTGTTTTTAGTCATGAAGGCGCGTATGCACGCTTTCCTGGCTTTAATGGTGGTGTCCATGGGGGCTGGCCTTTTTTCTGGTATGCCGCTCGATAAAATCGCAGCGACGATGGAAAAAGGGATGGGAGGCACCCTCGGCTTCCTGGCGGTGGTTGTCGCCCTGGGAGCTATGTTTGGCAAGATCTTACATGAAACCGGCGCAGTCGATCAGATTGCCGTCAAAATGCTCAAATCCTTCGGTCACAGCCGCGCGCATTATGCCATCGGCCTTGCGGGGCTGGTCTGTGCGCTACCGCTGTTCTTTGAAGTGGCGATAGTTCTGCTGATTAGCGTTGCTTTCTCAATGGCGCGCCACACCGGTACGAACCTGGTGAAGCTGGTAATCCCATTATTTGCAGGCGTGGCGGCAGCGGCGGCATTTCTGGTGCCTGGACCAGCGCCGATGCTGCTGGCATCGCAGATGAATGCCGACTTTGGCTGGATGATCCTGATTGGCCTGTGTGCGGCAATTCCGGGAATGATTATTGCCGGGCCGCTGTGGGGTAACTTCATCAGCCGTTACGTTGAGCTGCATATTCCTGACGACATCAGCGAACCGCATCTCGGCGAAGGCAAAATGCCATCTTTCGGATTCAGCCTGTCGCTGATCCTGCTGCCGCTGGTGCTGGTAGGGCTGAAAACCATTGCCGCGCGTTTTGTGCCGGAAGGATCAACTGCTTACGAATGGTTTGAGTTTATCGGTCATCCGTTTACCGCGATTCTGGTTGCTTGTCTGGTGGCGATTTACGGTCTGGCAATGCGTCAGGGCATGCCAAAAGACAAAGTGATGGAGATTTGCGGTCACGCGCTGCAACCGGCGGGGATCATTCTGCTGGTGATTGGTGCGGGCGGCGTGTTCAAACAGGTGCTGGTTGACTCTGGCGTAGGTCCGGCACTGGGCGAAGCGTTAACCGGCATGGGCCTGCCGATTGCTATCACCTGCTTCGTGCTGGCAGCTGCAGTGCGCATCATTCAGGGTTCTGCCACCGTAGCCTGTTTAACGGCGGTAGGACTGGTGATGCCGGTTATTGAACAACTGAACTACTCCGGTGCGCAAATGGCGGCGCTGTCGATTTGTATCGCTGGTGGTTCGATTGTTGTCAGCCACGTTAACGACGCCGGTTTCTGGTTGTTCGGTAAATTTACCGGCGCGACCGAAGCCGAAACGCTGAAAACCTGGACCATGATGGAAACCATCCTCGGCACTGTCGGTGCCATCGTTGGGATGATTGCGTTCCAGCTGTTGAGTTAA", - "dna_sequence_length": 1341, - "functions": [ - "gluconate transporter, low affinity GNT 1 system" - ], - "id": "CDS_3372", - "location": [ - [ - "NC_000913", - 3577061, - "-", - 1341 - ] - ], - "md5": "f7a75fee18bc2200fe704526bdc17971", - "parent_gene": "", - "protein_md5": "782dcc17f9410baf1c03624374d31c94", - "protein_translation": "MTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSGMPLDKIAATMEKGMGGTLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAHYAIGLAGLVCALPLFFEVAIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVPGPAPMLLASQMNADFGWMILIGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHLGEGKMPSFGFSLSLILLPLVLVGLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLVAIYGLAMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALTGMGLPIAITCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAGGSIVVSHVNDAGFWLFGKFTGATEAETLKTWTMMETILGTVGAIVGMIAFQLLS", - "protein_translation_length": 446, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "gntK" - ], - [ - "gene_synonym", - "b3437" - ], - [ - "gene_synonym", - "GeneID:947937" - ], - [ - "gene_synonym", - "EcoGene:EG12629" - ], - [ - "gene_synonym", - "JW3400" - ], - [ - "gene_synonym", - "NP_417894.2" - ], - [ - "gene_synonym", - "GI:90111591" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46859" - ], - [ - "gene_synonym", - "ASAP:ABE-0011224" - ], - [ - "gene_synonym", - "ECK3422" - ] - ], - "dna_sequence": "TTGAGCACGACTAACCATGATCACCACATTTACGTCTTGATGGGCGTATCGGGCAGCGGCAAATCTGCGGTCGCCAGTGAAGTGGCGCATCAACTTCATGCCGCGTTTCTTGATGGCGATTTCCTCCATCCACGGCGCAATATCGAAAAAATGGCGTCTGGCGAACCACTGAATGACGACGATCGCAAACCGTGGTTGCAGGCGCTGAACGACGCCGCGTTTGCTATGCAGCGCACTAATAAAGTGTCGCTGATCGTCTGTTCTGCATTGAAAAAACACTATCGCGACTTGCTGCGTGAAGGTAATCCGAATCTCTCTTTCATCTATTTGAAAGGCGATTTTGATGTGATTGAAAGCCGCCTGAAAGCGCGCAAAGGCCATTTCTTTAAAACCCAAATGTTGGTGACGCAGTTTGAAACGCTGCAGGAGCCGGGTGCGGACGAAACCGATGTACTGGTGGTGGATATCGATCAACCGCTGGAAGGTGTTGTGGCAAGCACCATTGAGGTTATTAAAAAAGGCAAATAA", - "dna_sequence_length": 528, - "functions": [ - "gluconate kinase 2" - ], - "id": "CDS_3373", - "location": [ - [ - "NC_000913", - 3577592, - "-", - 528 - ] - ], - "md5": "300c6777c15068b05b61eed62ef35da9", - "parent_gene": "", - "protein_md5": "e927716d011bc5440f5b1c440190fd30", - "protein_translation": "MSTTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPLEGVVASTIEVIKKGK", - "protein_translation_length": 175, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947946" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACP5" - ], - [ - "gene_synonym", - "YP_026222.1" - ], - [ - "gene_synonym", - "b3438" - ], - [ - "gene_synonym", - "EcoGene:EG12630" - ], - [ - "gene_synonym", - "GI:49176356" - ], - [ - "gene_synonym", - "JW5946" - ], - [ - "gene_synonym", - "ASAP:ABE-0011226" - ], - [ - "gene_synonym", - "gntR" - ], - [ - "gene_synonym", - "ECK3423" - ] - ], - "dna_sequence": "ATGAAAAAGAAAAGACCCGTACTTCAGGATGTGGCTGACCGTGTAGGCGTGACCAAAATGACGGTCAGCCGTTTTTTACGCAACCCGGAGCAGGTTTCCGTCGCTCTACGCGGCAAGATTGCCGCGGCTCTTGATGAACTGGGCTATATTCCCAATCGTGCGCCCGATATCCTCTCTAACGCCACCAGCCGGGCGATTGGCGTCCTGTTACCTTCTCTCACCAACCAGGTTTTCGCGGAAGTATTACGCGGAATCGAAAGCGTCACCGACGCGCACGGTTATCAGACCATGCTGGCGCACTACGGTTATAAACCGGAAATGGAGCAAGAACGCCTCGAATCCATGCTCTCCTGGAATATCGACGGCCTGATCCTCACCGAACGTACCCACACGCCGCGCACCTTAAAGATGATTGAAGTGGCGGGTATTCCCGTGGTGGAACTGATGGACAGCAAGTCGCCATGCCTTGATATCGCCGTCGGTTTTGATAACTTTGAAGCAGCACGCCAGATGACCACTGCCATTATTGCTCGCGGGCATCGCCACATTGCCTATCTCGGCGCACGTCTCGACGAACGTACTATCATCAAACAGAAGGGATACGAACAGGCGATGCTGGATGCAGGCCTGGTGCCATATAGCGTGATGGTTGAGCAATCTTCTTCTTACTCTTCCGGTATTGAACTGATTCGCCAGGCGCGGCGGGAATATCCGCAGCTGGATGGCGTGTTCTGTACGAATGATGACCTGGCGGTCGGCGCGGCGTTTGAATGTCAGCGTCTGGGGTTAAAAGTTCCTGACGATATGGCGATTGCCGGTTTCCACGGTCATGACATTGGTCAGGTGATGGAGCCACGACTTGCGAGCGTGCTGACGCCGCGTGAGCGGATGGGCAGTATTGGCGCTGAACGCCTGCTGGCGCGTATTCGTGGCGAATCTGTGACACCGAAAATGTTAGATTTAGGTTTCACCTTGTCACCGGGCGGATCTATTTAA", - "dna_sequence_length": 996, - "functions": [ - "d-gluconate inducible gluconate regulon transcriptional repressor" - ], - "id": "CDS_3374", - "location": [ - [ - "NC_000913", - 3578726, - "-", - 996 - ] - ], - "md5": "64edee9b7929fc70d25f19d5cab42456", - "parent_gene": "", - "protein_md5": "3bc30c6e0efeb551e706ffa51cd07ed6", - "protein_translation": "MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAALDELGYIPNRAPDILSNATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYGYKPEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGIPVVELMDSKSPCLDIAVGFDNFEAARQMTTAIIARGHRHIAYLGARLDERTIIKQKGYEQAMLDAGLVPYSVMVEQSSSYSSGIELIRQARREYPQLDGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGSIGAERLLARIRGESVTPKMLDLGFTLSPGGSI", - "protein_translation_length": 331, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417896.1" - ], - [ - "gene_synonym", - "GeneID:947945" - ], - [ - "gene_synonym", - "GI:16131311" - ], - [ - "gene_synonym", - "JW3402" - ], - [ - "gene_synonym", - "b3439" - ], - [ - "gene_synonym", - "EcoGene:EG12943" - ], - [ - "gene_synonym", - "yhhW" - ], - [ - "gene_synonym", - "ASAP:ABE-0011228" - ], - [ - "gene_synonym", - "ECK3424" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46852" - ] - ], - "dna_sequence": "ATGATCTACTTACGCAAAGCAAATGAACGTGGTCATGCAAATCATGGCTGGCTGGACTCCTGGCATACTTTCTCTTTTGCCAACTATTACGATCCGAACTTTATGGGCTTCTCCGCGCTGCGCGTGATTAACGACGACGTGATTGAAGCAGGGCAGGGCTTCGGCACTCACCCGCATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTTGAGCATCAGGACAGCATGGGCAATAAAGAGCAGGTTCCGGCGGGTGAGTTCCAGATTATGAGTGCTGGTACGGGTATTCGTCACTCAGAGTACAACCCAAGCAGCACCGAGCGTCTGCATCTGTATCAGATCTGGATCATGCCTGAAGAAAACGGTATTACGCCGCGTTATGAACAGCGTCGCTTCGATGCCGTACAGGGCAAACAGCTGGTGCTCTCGCCGGATGCGCGAGATGGTTCATTGAAAGTGCATCAGGATATGGAACTGTACCGCTGGGCGTTGCTGAAAGATGAGCAGTCGGTGCATCAGATTGCCGCTGAACGCCGCGTCTGGATCCAGGTGGTGAAAGGCAATGTCACCATTAACGGCGTGAAAGCCTCGACCAGCGATGGTCTGGCAATCTGGGATGAGCAGGCAATCTCCATCCATGCGGATAGCGACAGCGAAGTGTTACTGTTCGATCTGCCGCCGGTTTAA", - "dna_sequence_length": 696, - "functions": [ - "quercetinase activity in vitro" - ], - "id": "CDS_3375", - "location": [ - [ - "NC_000913", - 3579645, - "-", - 696 - ] - ], - "md5": "e1d98b4f006a5f9f766142bc5b84ec51", - "parent_gene": "", - "protein_md5": "3f062636bed0cf06fa22e81645b5893b", - "protein_translation": "MIYLRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVINDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWIMPEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTINGVKASTSDGLAIWDEQAISIHADSDSEVLLFDLPPV", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947944" - ], - [ - "gene_synonym", - "ASAP:ABE-0011232" - ], - [ - "gene_synonym", - "GI:16131312" - ], - [ - "gene_synonym", - "JW3403" - ], - [ - "gene_synonym", - "b3440" - ], - [ - "gene_synonym", - "EcoGene:EG12944" - ], - [ - "gene_synonym", - "NP_417897.1" - ], - [ - "gene_synonym", - "ECK3425" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46853" - ], - [ - "gene_synonym", - "yhhX" - ] - ], - "dna_sequence": "ATGGTCATCAACTGCGCCTTTATTGGCTTCGGCAAAAGCACCACCCGTTACCATCTGCCGTATGTACTTAACCGCAAGGATAGCTGGCATGTCGCGCATATTTTTCGTCGCCATGCGAAGCCGGAAGAACAGGCTCCCATTTATTCCCATATCCATTTCACCAGCGATCTCGACGAAGTACTAAACGATCCCGATGTTAAGCTGGTTGTTGTCTGCACCCACGCGGACAGCCATTTCGAGTACGCGAAACGCGCGCTGGAAGCCGGGAAAAATGTGCTGGTCGAAAAACCGTTCACTCCGACACTTGCGCAGGCGAAAGAGCTGTTTGCGTTGGCGAAAAGCAAAGGGCTGACCGTCACGCCGTATCAGAATCGTCGCTTTGACTCCTGCTTCCTGACAGCGAAAAAAGCGATTGAAAGTGGCAAGTTGGGAGAGATTGTTGAAGTGGAAAGCCATTTTGACTATTACCGCCCGGTGGCAGAAACCAAACCTGGGCTGCCGCAGGATGGCGCGTTTTATGGCCTTGGTGTGCATACGATGGACCAGATTATTTCTCTGTTCGGTCGCCCGGATCACGTCGCTTATGACATCCGCAGCCTGCGTAATAAAGCCAATCCTGACGACACCTTTGAAGCGCAACTGTTTTATGGCGACCTGAAAGCCATCGTCAAAACCAGCCATCTGGTGAAAATCGATTATCCGAAATTTATCGTTCACGGTAAGAAAGGTTCGTTTATTAAATACGGTATCGACCAGCAGGAAACCAGCCTGAAGGCTAATATTATGCCGGGCGAACCGGGATTCGCAGCGGATGATTCGGTCGGTGTGCTGGAGTATGTCAATGACGAGGGCGTGACGGTCAGAGAAGAGATGAAGCCGGAGATGGGCGATTACGGGCGCGTTTATGATGCGTTGTATCAAACCATCACCCACGGTGCGCCAAATTACGTCAAGGAATCTGAAGTTCTTACCAATCTGGAAATCCTTGAACGCGGATTTGAGCAAGCCTCTCCCTCCACAGTAACTCTCGCTAAGTAA", - "dna_sequence_length": 1038, - "functions": [ - "putative oxidoreductase" - ], - "id": "CDS_3376", - "location": [ - [ - "NC_000913", - 3580805, - "-", - 1038 - ] - ], - "md5": "d5a2a130bed2cbae4da6466b6bf2047e", - "parent_gene": "", - "protein_md5": "4a37b1205d96b07b9f0e47e33b8e4e86", - "protein_translation": "MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYYRPVAETKPGLPQDGAFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGDLKAIVKTSHLVKIDYPKFIVHGKKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGVLEYVNDEGVTVREEMKPEMGDYGRVYDALYQTITHGAPNYVKESEVLTNLEILERGFEQASPSTVTLAK", - "protein_translation_length": 345, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131313" - ], - [ - "gene_synonym", - "NP_417898.1" - ], - [ - "gene_synonym", - "GeneID:947943" - ], - [ - "gene_synonym", - "EcoGene:EG12945" - ], - [ - "gene_synonym", - "b3441" - ], - [ - "gene_synonym", - "JW3405" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46854" - ], - [ - "gene_synonym", - "ECK3427" - ], - [ - "gene_synonym", - "ASAP:ABE-0011240" - ], - [ - "gene_synonym", - "yhhY" - ] - ], - "dna_sequence": "ATGAGTGAGATAGTAATACGCCACGCAGAAACACGGGATTACGAGGCCATCAGGCAGATTCACGCCCAGCCGGAGGTGTATTGCAACACACTACAGGTGCCTCATCCTTCCGATCATATGTGGCAGGAGCGACTCGCCGATCGTCCCGGCATCAAGCAACTCGTCGCCTGTATTGATGGAGACGTCGTGGGCCATCTCACCATTGACGTGCAACAGCGCCCACGCCGCAGTCATGTTGCCGATTTTGGTATCTGTGTCGACTCTCGTTGGAAGAACCGCGGCGTCGCCAGCGCCCTGATGCGAGAGATGATTGAAATGTGCGACAACTGGTTGCGGGTAGATCGCATTGAACTAACCGTGTTTGTCGATAACGCCCCGGCAATTAAGGTCTATAAAAAATACGGCTTTGAAATTGAAGGGACTGGTAAGAAGTACGCATTGCGTAATGGTGAATATGTCGATGCATATTATATGGCGCGGGTGAAGTAA", - "dna_sequence_length": 489, - "functions": [ - "aminoacyl nucleotide detoxifying acetyltransferase" - ], - "id": "CDS_3377", - "location": [ - [ - "NC_000913", - 3581138, - "+", - 489 - ] - ], - "md5": "3b179446f75b42c9b4b3f3cbaaf9cb02", - "parent_gene": "", - "protein_md5": "5d8fd3de559e92be1c9ef0c239fa637b", - "protein_translation": "MSEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVADFGICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDAYYMARVK", - "protein_translation_length": 162, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011244" - ], - [ - "gene_synonym", - "GI:16131314" - ], - [ - "gene_synonym", - "b3442" - ], - [ - "gene_synonym", - "EcoGene:EG12946" - ], - [ - "gene_synonym", - "JW3406" - ], - [ - "gene_synonym", - "NP_417899.1" - ], - [ - "gene_synonym", - "GeneID:947952" - ], - [ - "gene_synonym", - "ECK3428" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46855" - ], - [ - "gene_synonym", - "yhhZ" - ] - ], - "dna_sequence": "ATGAGTAATATTGTTTACCTGACAGTAACGGGAGAACAACAAGGAAGCATCTCCGCAGGTTGTGGGACTTCTGAGTCTACAGGTAATCGTTGGCAGAGCGGGCATGAGGATGAAATATTTACATTCTCACTCTTAAATAATATTAATAATACGGGGCTTGGTTCACAGTTCCATGGTATAACATTTTGTAAATTAATTGATAAAAGCACTCCATTATTTATTAATTCCATTAACAATAATGAACAATTATTTATGGGATTTGACTTCTATCGAATAAATAGATTTGGTAGATTGGAAAAGTATTATTATATACAACTAAGAGGCGCTTTTTTATCGGCTATTCATCACCAGATCATTGAAAACCAACTGGATACAGAAACAATAACTATTAGTTATGAATTTATCCTCTGTCAACATCTTATCGCAAATACCGAGTTCAGCTATTTGGCACTCCCTGAAAATTATAACCGTTTGTTTTTACCAAATTCAAAAAACCAAACAAATAATCGTTTCAAAACGTTAAACAGCAAAGCTATTGGCAGGCTACTTGCTGCTGGTGGCGTATACAATGGGAACATTGAAGGATTCAGAGATACTGCGGAAAAACTGGGTGGAGATGCAATAAAAGGCTATGATCAAATACTAAATGAAAAAACAGCGGGCATAGCGATAGCAACAGCATCTATTCTTTTAACAAAGCGTTCTAATGTTGATACATATACAGAAATAAATAGTTACTTAGGCAAACTTAGAGGTCAACAAAAACTTCTTGATGGTATAGACATAATAGAAATAATATACATTAAGAGACCTTCAAAAGACTTAGCTAACTTACGAAAGGAGTTTAATAAAACTGTAAGAAAAAATTTTCTTATCAAACTTGCAAAAACCTCCGAAGCATCTGGAAGATTCAACGCCGAAGACCTTTTAAGAATGAGAAAGGGCAATGTTCCTCTAAATTATAATGTTCACCATAAACTATCTCTAGATGATGGTGGTACTAATGATTTCGAAAATTTAGTATTAATCGAAAACGAACCATATCATAAAGTTTTTACTAACATGCAATCACGAATAGCTAAGGGAATATTAGTAGGTGAAAGCAAAATCACTCCCTGGGCCATTCCATCTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGA", - "dna_sequence_length": 1179, - "functions": [ - "putative Hcp1 family polymorphic toxin protein", - "putative colicin-like DNase/tRNase activity" - ], - "id": "CDS_3378", - "location": [ - [ - "NC_000913", - 3581863, - "+", - 1179 - ] - ], - "md5": "460b349627b4e7c87be167ec449c0cf1", - "parent_gene": "", - "protein_md5": "2bbfd6cee16862bbce7d6cebf7225f77", - "protein_translation": "MSNIVYLTVTGEQQGSISAGCGTSESTGNRWQSGHEDEIFTFSLLNNINNTGLGSQFHGITFCKLIDKSTPLFINSINNNEQLFMGFDFYRINRFGRLEKYYYIQLRGAFLSAIHHQIIENQLDTETITISYEFILCQHLIANTEFSYLALPENYNRLFLPNSKNQTNNRFKTLNSKAIGRLLAAGGVYNGNIEGFRDTAEKLGGDAIKGYDQILNEKTAGIAIATASILLTKRSNVDTYTEINSYLGKLRGQQKLLDGIDIIEIIYIKRPSKDLANLRKEFNKTVRKNFLIKLAKTSEASGRFNAEDLLRMRKGNVPLNYNVHHKLSLDDGGTNDFENLVLIENEPYHKVFTNMQSRIAKGILVGESKITPWAIPSGSIYPPMKNIMDHTK", - "protein_translation_length": 392, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011246" - ], - [ - "gene_synonym", - "EcoGene:EG12947" - ], - [ - "gene_synonym", - "b3443" - ], - [ - "gene_synonym", - "GeneID:947951" - ], - [ - "gene_synonym", - "yrhA" - ], - [ - "gene_synonym", - "JW5864" - ], - [ - "gene_synonym", - "ECK3429" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46856" - ] - ], - "dna_sequence": "ATGATGACTAAAACCCAAATAAATAAATTAATAAAAATGATGAATGATTTAGACTATCCATTTGAAGCACCGCTCAAGGAATCATTTATTGAAAGTATAATCCAAATAGAATTTAATTCTAATTCAACTAATTGCCTGGAGAAGTTATGTAATGAAGTTAGTATTCTTTTTAAGAATCAACCTGATTATCTTACTTTTTTAAGAGCAATGGATGGATTCGAAGTTAATGGATTACGATTATTTAGCCTCTCGATTCCAGAACCTTCAGTTAAAAACCTTTTTGCCGTAAATGAATTTTATAGAAATAATGATGATTTCATAAACCCTGATCTACAAGAACGGTTAGTGATCGGGGATTATAGCATTTCAATATTTACTTATGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAA", - "dna_sequence_length": 495, - "id": "CDS_3379", - "location": [ - [ - "NC_000913", - 3583038, - "+", - 381 - ], - [ - "NC_000913", - 3584196, - "+", - 114 - ] - ], - "md5": "c5dc8b4b71e39c50242f276299604fdf", - "parent_gene": "", - "protein_md5": "58b0706f0cc20753f64c12a0daff17a6", - "protein_translation": "MMTKTQINKLIKMMNDLDYPFEAPLKESFIESIIQIEFNSNSTNCLEKLCNEVSILFKNQPDYLTFLRAMDGFEVNGLRLFSLSIPEPSVKNLFAVNEFYRNNDDFINPDLQERLVIGDYSISIFTYDIKSNFFEIRDNIGTENIFSSFSDFSSFLNEIMDSCS", - "protein_translation_length": 164, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "insA" - ], - [ - "gene_synonym", - "NP_417901.1" - ], - [ - "gene_synonym", - "GI:16131316" - ], - [ - "gene_synonym", - "GeneID:947950" - ], - [ - "gene_synonym", - "EcoGene:EG40001" - ], - [ - "gene_synonym", - "ASAP:ABE-0011249" - ], - [ - "gene_synonym", - "b3444" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF11" - ], - [ - "gene_synonym", - "ECK4556" - ] - ], - "dna_sequence": "GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA", - "dna_sequence_length": 276, - "functions": [ - "IS1 repressor TnpA" - ], - "id": "CDS_3380", - "location": [ - [ - "NC_000913", - 3583483, - "+", - 276 - ] - ], - "md5": "db0d756792984c1e534a2dad9bfdde5f", - "parent_gene": "", - "protein_md5": "edc4311bb7ac3cf8e138290b7630fdda", - "protein_translation": "MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR", - "protein_translation_length": 91, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0022" - ], - [ - "gene_synonym", - "GI:16131317" - ], - [ - "gene_synonym", - "insB1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011251" - ], - [ - "gene_synonym", - "NP_417902.1" - ], - [ - "gene_synonym", - "GeneID:947949" - ], - [ - "gene_synonym", - "b3445" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF28" - ], - [ - "gene_synonym", - "EcoGene:EG40002" - ] - ], - "dna_sequence": "ATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGTCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA", - "dna_sequence_length": 504, - "functions": [ - "IS1 transposase B" - ], - "id": "CDS_3381", - "location": [ - [ - "NC_000913", - 3583677, - "+", - 504 - ] - ], - "md5": "9b3b0a523236fbbb94e9a150e2349e7c", - "parent_gene": "", - "protein_md5": "a7ce8c3d73c6cbaea2dc673889ba240c", - "protein_translation": "MPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011255" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P46857" - ], - [ - "gene_synonym", - "EcoGene:EG12948" - ], - [ - "gene_synonym", - "JW3411" - ], - [ - "gene_synonym", - "GeneID:947948" - ], - [ - "gene_synonym", - "b3446" - ], - [ - "gene_synonym", - "GI:16131318" - ], - [ - "gene_synonym", - "NP_417903.1" - ], - [ - "gene_synonym", - "yrhB" - ], - [ - "gene_synonym", - "ECK3430" - ] - ], - "dna_sequence": "ATGATTACTTATCACGACGCATTCGCGAAAGCGAACCATTACCTTGATGATGCAGATCTCCCGGTCGTCATTACTCTACATGGACGCTTTAGCCAGGGCTGGTATTTCTGTTTCGAAGCACGAGAATTTCTCGAAACTGGAGATGAGGCCGCGCGCTTAGCTGGTAACGCACCTTTTATTATTGATAAAGACAGTGGTGAAATTCATTCTCTGGGAACGGCAAAACCGCTGGAAGAATATCTACAGGATTACGAAATAAAAAAGGCTACCTTCGGCTTGCCCTGA", - "dna_sequence_length": 285, - "functions": [ - "stable heat shock chaperone" - ], - "id": "CDS_3382", - "location": [ - [ - "NC_000913", - 3584759, - "+", - 285 - ] - ], - "md5": "84eef6c154ca3e1064bde7eccc7bc5f4", - "parent_gene": "", - "protein_md5": "32dda504b11ad96e8f1f2b64f9169ddd", - "protein_translation": "MITYHDAFAKANHYLDDADLPVVITLHGRFSQGWYFCFEAREFLETGDEAARLAGNAPFIIDKDSGEIHSLGTAKPLEEYLQDYEIKKATFGLP", - "protein_translation_length": 94, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011257" - ], - [ - "gene_synonym", - "ggt" - ], - [ - "gene_synonym", - "GeneID:947947" - ], - [ - "gene_synonym", - "NP_417904.1" - ], - [ - "gene_synonym", - "JW3412" - ], - [ - "gene_synonym", - "b3447" - ], - [ - "gene_synonym", - "GI:16131319" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P18956" - ], - [ - "gene_synonym", - "EcoGene:EG10374" - ], - [ - "gene_synonym", - "ECK3431" - ] - ], - "dna_sequence": "ATGATAAAACCGACGTTTTTACGCCGGGTGGCCATTGCTGCTCTGCTCTCAGGAAGTTGTTTTAGCGCCGCCGCCGCGCCTCCTGCGCCGCCCGTCTCGTATGGTGTGGAGGAAGATGTCTTCCACCCGGTACGCGCGAAACAGGGAATGGTAGCGTCTGTGGACGCCACTGCCACTCAGGTGGGGGTGGATATTCTCAAGGAGGGCGGGAATGCCGTTGATGCCGCCGTGGCGGTGGGCTACGCGCTGGCGGTAACGCATCCGCAGGCAGGGAATCTGGGCGGTGGTGGTTTTATGTTAATCCGCTCGAAAAATGGCAATACCACGGCTATCGATTTCCGCGAAATGGCACCCGCCAAAGCGACCCGCGATATGTTCCTCGATGATCAGGGCAACCCGGACAGCAAAAAATCACTCACTTCGCATCTGGCTTCCGGCACACCGGGTACGGTAGCAGGTTTCTCGCTGGCGCTGGATAAATACGGCACCATGCCGCTGAACAAAGTCGTGCAGCCCGCGTTTAAACTGGCACGCGATGGTTTTATCGTTAACGACGCGCTGGCTGACGATCTCAAAACCTACGGTAGCGAAGTGTTGCCGAATCACGAAAACAGTAAAGCTATCTTCTGGAAAGAGGGCGAGCCGCTGAAAAAGGGCGACACGCTGGTGCAGGCGAACCTGGCAAAGAGCCTGGAGATGATTGCTGAAAACGGCCCGGACGAATTCTATAAAGGCACGATTGCGGAACAGATCGCCCAGGAGATGCAGAAAAACGGTGGCTTGATCACTAAAGAAGATTTAGCAGCCTATAAAGCGGTCGAACGCACTCCGATAAGCGGCGATTATCGCGGGTATCAGGTTTACTCCATGCCACCGCCATCCTCCGGCGGGATCCATATCGTACAAATCCTCAATATTCTGGAAAACTTCGATATGAAGAAATACGGCTTTGGCAGCGCCGATGCGATGCAAATCATGGCAGAAGCGGAGAAATACGCCTACGCCGACCGCTCGGAATATCTTGGCGACCCGGATTTTGTCAAAGTACCGTGGCAGGCGCTGACCAATAAAGCCTATGCCAAATCTATTGCCGATCAAATTGATATCAATAAAGCGAAGCCATCCAGCGAAATTCGCCCCGGCAAGCTTGCGCCTTATGAGAGTAATCAAACTACCCATTACTCAGTGGTGGATAAAGATGGTAACGCGGTGGCGGTGACCTATACGCTGAACACCACCTTCGGTACGGGCATTGTCGCGGGCGAGAGCGGTATTCTGCTTAATAACCAGATGGATGATTTCTCCGCCAAACCGGGCGTACCGAACGTTTACGGGCTGGTGGGCGGTGATGCCAACGCCGTCGGGCCGAACAAACGCCCGCTGTCGTCGATGTCGCCGACCATTGTGGTGAAAGACGGTAAAACCTGGCTGGTTACCGGTAGCCCAGGCGGTAGCCGGATCATCACTACAGTGCTGCAAATGGTGGTGAATAGCATCGATTATGGCTTGAACGTCGCCGAAGCGACCAATGCGCCGCGTTTCCACCATCAGTGGTTGCCGGACGAGCTGCGTGTCGAAAAAGGGTTTAGCCCGGATACGCTCAAGCTGCTGGAAGCAAAAGGTCAGAAAGTGGCGCTGAAAGAGGCGATGGGCAGTACACAAAGCATTATGGTTGGGCCGGACGGTGAGTTGTACGGCGCATCCGACCCGCGCTCGGTGGATGATTTAACGGCGGGGTACTAA", 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"gene_synonym", - "NP_417905.1" - ], - [ - "gene_synonym", - "b3448" - ], - [ - "gene_synonym", - "yhhA" - ], - [ - "gene_synonym", - "ASAP:ABE-0011262" - ], - [ - "gene_synonym", - "JW3413" - ], - [ - "gene_synonym", - "GeneID:947956" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADX7" - ], - [ - "gene_synonym", - "ECK3432" - ], - [ - "gene_synonym", - "EcoGene:EG11184" - ], - [ - "gene_synonym", - "GI:16131320" - ] - ], - "dna_sequence": "ATGAAACGACTTCTGATTCTTACGGCACTCCTGCCGTTTGTCGGCTTTGCACAGCCCATTAATACTCTGAACAACCCTAACCAGCCGGGGTATCAGATACCCAGCCAGCAGCGGATGCAAACCCAGATGCAGACTCAGCAAATCCAGCAAAAAGGGATGCTGAATCAGCAACTGAAAACGCAAACTCAGTTGCAACAGCAGCATTTAGAAAACCAGATAAACAATAATTCTCAGCGGGTGTTGCAGTCACAGCCGGGGGAGCGAAATCCCGCCCGGCAGCAAATGCTGCCCAACACCAACGGCGGGATGTTAAACAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAA", - "dna_sequence_length": 441, - "functions": [ - "DUF2756 family protein" - ], - "id": "CDS_3384", - "location": [ - [ - "NC_000913", - 3586943, - "+", - 441 - ] - ], - "md5": "5f0165b8935689af6abfcb291bdf2e05", - "parent_gene": "", - "protein_md5": "73cf2129d481318202345c58426cbd8b", - "protein_translation": "MKRLLILTALLPFVGFAQPINTLNNPNQPGYQIPSQQRMQTQMQTQQIQQKGMLNQQLKTQTQLQQQHLENQINNNSQRVLQSQPGERNPARQQMLPNTNGGMLNSNRNPDSSLNQQHMLPERRNGDMLNQPSTPQPDIPLKTIGP", - "protein_translation_length": 146, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3449" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10908" - ], - [ - "gene_synonym", - "JW3414" - ], - [ - "gene_synonym", - "ASAP:ABE-0011264" - ], - [ - "gene_synonym", - "GeneID:947955" - ], - [ - "gene_synonym", - "NP_417906.1" - ], - [ - "gene_synonym", - "ECK3433" - ], - [ - "gene_synonym", - "EcoGene:EG11050" - ], - [ - "gene_synonym", - "ugpQ" - ], - [ - "gene_synonym", - "GI:16131321" - ] - ], - "dna_sequence": "ATGAGTAACTGGCCTTATCCCCGCATCGTCGCTCATCGTGGCGGCGGTAAGCTGGCCCCGGAAAACACCCTGGCGTCAATCGACGTCGGGGCAAAATACGGTCATAAGATGATCGAATTTGACGCGAAGTTATCGAAAGATGGCGAGATCTTCCTGCTCCATGACGACAATCTCGAACGTACCAGCAACGGCTGGGGCGTCGCGGGTGAACTGAACTGGCAGGATTTACTGCGCGTGGATGCGGGCAGTTGGTACAGCAAAATGTTTAAAGGTGAGCCGCTACCGTTGCTTTCGCAGGTGGCGGAACGTTGCCGCGAACACGGGATGATGGCGAATATCGAAATCAAACCCACCACCGGCACCGGGCCATTAACGGGCAAAATGGTGGCGCTGGCGGCACGCGAGCTGTGGGCCGGTATGACGCCGCCGCTGCTGTCATCGTTTGAGATTGATGCTTTAGAAGCTGCACAACAGGCGGCACCGGAACTGCCGCGCGGTTTGTTGCTGGATGAGTGGCGCGACGACTGGCGCGAACTGACCGCGCGGCTGGGCTGCGTCTCTATTCATCTCAATCATAAGTTACTCAATAAAGCGCGAGTGATGCAGTTGAAAGACGCCGGACTGCGGATTCTGGTTTATACCGTCAATAAACCCCAGCGCGCAGCAGAGTTGCTGCGCTGGGGTGTGGATTGCATCTGTACCGATGCGATTGACGTGATTGGTCCGAACTTTACGGCCCAATAG", - "dna_sequence_length": 744, - "functions": [ - "glycerophosphodiester phosphodiesterase, cytosolic" - ], - "id": "CDS_3385", - "location": [ - [ - "NC_000913", - 3588113, - "-", - 744 - ] - ], - "md5": "272005e04c1548f83cbb95f66f70a967", - "parent_gene": "", - "protein_md5": "176e7c3c071d87d4579f9055e91b7f23", - "protein_translation": "MSNWPYPRIVAHRGGGKLAPENTLASIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLERTSNGWGVAGELNWQDLLRVDAGSWYSKMFKGEPLPLLSQVAERCREHGMMANIEIKPTTGTGPLTGKMVALAARELWAGMTPPLLSSFEIDALEAAQQAAPELPRGLLLDEWRDDWRELTARLGCVSIHLNHKLLNKARVMQLKDAGLRILVYTVNKPQRAAELLRWGVDCICTDAIDVIGPNFTAQ", - "protein_translation_length": 247, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947953" - ], - [ - "gene_synonym", - "b3450" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10907" - ], - [ - "gene_synonym", - "JW3415" - ], - [ - "gene_synonym", - "ugpC" - ], - [ - "gene_synonym", - "NP_417907.2" - ], - [ - "gene_synonym", - "GI:90111593" - ], - [ - "gene_synonym", - "EcoGene:EG11048" - ], - [ - "gene_synonym", - "ECK3434" - ], - [ - "gene_synonym", - "ASAP:ABE-0011266" - ] - ], - "dna_sequence": "ATGGCAGGACTGAAATTACAGGCAGTAACCAAAAGCTGGGATGGTAAAACCCAGGTCATTAAACCGCTGACCCTTGATGTGGCGGATGGCGAATTTATCGTGATGGTCGGGCCGTCTGGCTGCGGGAAATCGACGCTGCTGCGCATGGTTGCCGGGCTGGAGCGGGTGACAGAAGGCGATATCTGGATCAACGACCAGCGCGTGACTGAAATGGAGCCAAAAGATCGCGGGATTGCGATGGTGTTCCAGAACTACGCGCTTTATCCGCATATGAGTGTCGAAGAAAACATGGCGTGGGGGCTGAAAATTCGCGGCATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCGATGCCAAGCTGCGCGTGCAGATGCGTCTTGAACTGCAACAGTTGCACCGTCGCCTGAAAACGACTTCACTCTACGTTACTCACGATCAGGTTGAAGCGATGACGCTCGCCCAGCGAGTAATGGTGATGAACGGCGGTGTTGCCGAACAGATTGGCACACCAGTTGAAGTCTACGAAAAGCCCGCCAGCCTGTTTGTAGCGAGTTTTATCGGCAGTCCGGCGATGAACCTGCTGACAGGCCGCGTGAATAACGAAGGCACGCATTTCGAACTGGACGGCGGTATTGAGCTGCCGCTAAACGGTGGCTACCGTCAGTATGCCGGGCGTAAAATGACTCTCGGCATTCGCCCGGAACATATTGCGCTAAGCTCGCAGGCAGAAGGCGGCGTACCGATGGTGATGGACACGCTGGAGATCCTCGGCGCAGATAACCTGGCGCACGGACGCTGGGGCGAGCAGAAGCTGGTGGTGCGACTGGCGCATCAGGAGCGCCCGACGGCAGGCAGCACGCTGTGGCTGCATCTGGCGGAAAATCAGCTGCATCTTTTTGATGGTGAAACAGGACAACGAGTATGA", 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[ - "gene_synonym", - "JW3416" - ], - [ - "gene_synonym", - "NP_417908.1" - ], - [ - "gene_synonym", - "EcoGene:EG11049" - ], - [ - "gene_synonym", - "ECK3435" - ], - [ - "gene_synonym", - "GI:16131323" - ] - ], - "dna_sequence": "ATGATTGAGAACCGTCCGTGGCTGACGATATTCAGCCATACCATGCTGATCCTCGGGATCGCGGTGATCCTCTTCCCGCTGTACGTGGCGTTTGTCGCGGCGACGCTGGATAAACAGGCCGTCTATGCCGCGCCGATGACGCTCATCCCCGGCACACATCTGCTGGAAAACATCCACAACATCTGGGTGAACGGGGTAGGCACGAATAGCGCGCCGTTCTGGCGGATGTTGCTTAACAGCTTTGTGATGGCGTTCAGCATTACGCTCGGCAAAATTACCGTCTCGATGCTCTCGGCATTTGCCATTGTCTGGTTTCGTTTTCCGCTACGTAACCTCTTCTTCTGGATGATTTTTATCACCCTGATGCTGCCGGTTGAAGTACGTATCTTCCCGACGGTGGAAGTCATCGCCAACCTGCAGATGCTCGACAGCTACGCCGGTTTAACGCTGCCGCTGATGGCCTCGGCGACCGCTACTTTCCTGTTCCGCCAGTTCTTTATGACGCTGCCGGATGAGCTGGTGGAAGCCGCGCGGATCGACGGCGCATCGCCAATGCGCTTCTTTTGCGACATCGTTTTTCCGCTCTCCAAAACTAATCTGGCGGCGCTGTTTGTGATCACCTTTATCTACGGCTGGAATCAGTATTTGTGGCCGTTGTTGATTATTACCGATGTGGATCTCGGCACCACCGTGGCAGGGATCAAAGGGATGATCGCTACAGGCGAAGGCACCACGGAATGGAACTCAGTGATGGTGGCGATGTTGTTAACGCTTATCCCTCCGGTGGTGATTGTTTTAGTGATGCAGCGTGCCTTCGTGCGCGGCCTGGTCGATAGTGAGAAATAA", - "dna_sequence_length": 846, - "functions": [ - "sn-glycerol-3-phosphate ABC transporter permease" - ], - "id": "CDS_3387", - "location": [ - [ - "NC_000913", - 3590027, - "-", - 846 - ] - ], - "md5": "7ffd9c2283553a0b97bbdc2d7f9114fe", - "parent_gene": "", - "protein_md5": "62251455de77a373c872739252af0cd6", - "protein_translation": "MIENRPWLTIFSHTMLILGIAVILFPLYVAFVAATLDKQAVYAAPMTLIPGTHLLENIHNIWVNGVGTNSAPFWRMLLNSFVMAFSITLGKITVSMLSAFAIVWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLQMLDSYAGLTLPLMASATATFLFRQFFMTLPDELVEAARIDGASPMRFFCDIVFPLSKTNLAALFVITFIYGWNQYLWPLLIITDVDLGTTVAGIKGMIATGEGTTEWNSVMVAMLLTLIPPVVIVLVMQRAFVRGLVDSEK", - "protein_translation_length": 281, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131324" - ], - [ - "gene_synonym", - "psiB" - ], - [ - "gene_synonym", - "psiC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10905" - ], - [ - "gene_synonym", - "b3452" - ], - [ - "gene_synonym", - "GeneID:947957" - ], - [ - "gene_synonym", - "ugpA" - ], - [ - "gene_synonym", - "JW3417" - ], - [ - "gene_synonym", - "ASAP:ABE-0011272" - ], - [ - "gene_synonym", - "EcoGene:EG11046" - ], - [ - "gene_synonym", - "ECK3436" - ], - [ - "gene_synonym", - "NP_417909.1" - ] - ], - "dna_sequence": "ATGTCATCATCCCGTCCGGTGTTCCGCTCGCGCTGGCTGCCTTATCTGCTGGTCGCGCCGCAGCTCATCATCACCGTTATCTTTTTTATCTGGCCTGCGGGCGAAGCGTTGTGGTACTCGCTACAAAGCGTCGATCCGTTTGGTTTCTCCAGCCAGTTTGTCGGCCTGGATAACTTCGTCACGCTGTTCCATGACAGCTACTATCTCGACTCCTTCTGGACGACGATAAAATTCAGCACCTTTGTCACCGTCAGCGGTTTGCTGGTATCGCTGTTCTTTGCGGCGCTGGTGGAGTACATCGTGCGCGGCAGCCGTTTCTATCAAACCTTAATGTTGCTGCCTTACGCCGTGGCTCCCGCCGTTGCCGCCGTATTGTGGATCTTCCTGTTTAACCCCGGTCGCGGGCTGATCACCCATTTTCTCGCGGAGTTCGGCTACGACTGGAACCACGCGCAAAACAGCGGTCAGGCAATGTTTCTGGTGGTGTTTGCCTCAGTATGGAAGCAAATCAGCTACAACTTCCTGTTCTTCTATGCCGCGCTGCAATCCATTCCCCGTTCGTTGATCGAAGCCGCAGCCATCGACGGTGCAGGGCCGATTCGCCGCTTCTTTAAGATTGCGCTGCCGCTTATCGCCCCGGTGAGTTTCTTCCTGCTGGTAGTGAACCTGGTGTATGCCTTCTTCGACACCTTCCCGGTGATCGACGCCGCCACGTCCGGCGGGCCGGTTCAGGCCACCACGACGCTGATTTATAAGATCTACCGCGAAGGTTTTACCGGACTGGATCTGGCTTCGTCTGCCGCACAGTCGGTGGTGTTGATGTTCCTCGTCATCGTGCTGACGGTGGTGCAGTTCCGCTATGTTGAAAGCAAGGTGCGTTACCAATGA", - "dna_sequence_length": 888, - "functions": [ - "sn-glycerol-3-phosphate ABC transporter permease" - ], - "id": "CDS_3388", - "location": [ - [ - "NC_000913", - 3590911, - "-", - 888 - ] - ], - "md5": "593e6b6dfdd4de4583a849ddfe2dee01", - "parent_gene": "", - "protein_md5": "ae4852e74e0ff9f9e525468243dc365b", - "protein_translation": "MSSSRPVFRSRWLPYLLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGLDNFVTLFHDSYYLDSFWTTIKFSTFVTVSGLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFYAALQSIPRSLIEAAAIDGAGPIRRFFKIALPLIAPVSFFLLVVNLVYAFFDTFPVIDAATSGGPVQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVVQFRYVESKVRYQ", - "protein_translation_length": 295, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3418" - ], - [ - "gene_synonym", - "GI:16131325" - ], - [ - "gene_synonym", - "psiB" - ], - [ - "gene_synonym", - "psiC" - ], - [ - "gene_synonym", - "ASAP:ABE-0011274" - ], - [ - "gene_synonym", - "b3453" - ], - [ - "gene_synonym", - "GeneID:947962" - ], - [ - "gene_synonym", - "ugpB" - ], - [ - "gene_synonym", - "NP_417910.1" - ], - [ - "gene_synonym", - "EcoGene:EG11047" - ], - [ - "gene_synonym", - "ECK3437" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG80" - ] - ], - "dna_sequence": "ATGAAACCGTTACATTATACAGCTTCAGCACTGGCGCTCGGACTGGCGTTAATGGGGAATGCACAGGCAGTGACGACCATTCCGTTCTGGCATTCTATGGAAGGGGAACTGGGTAAAGAGGTGGATTCTCTGGCCCAACGTTTTAACGCCGAAAACCCGGATTACAAAATTGTACCGACCTATAAAGGCAACTACGAACAGAATTTAAGCGCGGGGATTGCCGCATTTCGTACCGGCAACGCGCCGGCTATTTTGCAGGTTTATGAAGTTGGCACCGCCACCATGATGGCGTCGAAAGCCATTAAACCGGTGTATGACGTGTTTAAAGAGGCAGGGATTCAGTTCGATGAGTCGCAGTTTGTGCCGACGGTTTCAGGTTACTACTCCGACAGCAAAACGGGCCACTTACTCTCCCAGCCATTCAACAGCTCGACCCCCGTTCTCTATTACAACAAAGACGCCTTCAAGAAAGCAGGATTAGACCCGGAACAGCCGCCGAAAACCTGGCAGGATCTGGCGGACTATGCCGCGAAACTGAAAGCCTCCGGCATGAAGTGCGGCTACGCCAGCGGCTGGCAGGGCTGGATCCAACTGGAAAACTTTAGCGCCTGGAACGGTCTGCCGTTTGCCAGCAAAAACAACGGCTTTGACGGCACGGACGCGGTGCTGGAGTTCAATAAGCCGGAGCAGGTGAAACACATCGCCATGCTCGAGGAGATGAACAAGAAGGGCGACTTCAGCTACGTCGGTCGTAAGGATGAATCCACCGAGAAGTTCTATAACGGTGATTGCGCGATGACCACCGCCTCTTCCGGTTCTCTTGCCAACATTCGCGAGTACGCCAAATTTAACTACGGCGTAGGCATGATGCCTTACGACGCCGATGCGAAAGATGCGCCACAAAACGCCATTATCGGCGGAGCCAGCCTGTGGGTGATGCAGGGTAAAGATAAAGAAACGTATACCGGTGTGGCGAAGTTCCTCGATTTCCTCGCGAAGCCAGAAAACGCTGCCGAGTGGCATCAGAAAACCGGTTATCTGCCAATCACCAAAGCAGCGTATGACCTGACCCGTGAGCAGGGCTTTTATGAGAAAAACCCAGGGGCGGATACCGCGACGCGTCAGATGCTGAATAAGCCGCCGTTGCCGTTCACCAAAGGGCTGCGTCTGGGCAACATGCCGCAGATCCGCGTGATTGTGGATGAAGAGCTGGAGAGCGTGTGGACCGGTAAGAAGACACCACAGCAGGCACTGGATACCGCCGTTGAGCGTGGAAATCAGTTGCTGCGCCGCTTTGAGAAATCGACGAAGTCTTAA", - "dna_sequence_length": 1317, - "functions": [ - "sn-glycerol-3-phosphate ABC transporter periplasmic binding protein" - ], - "id": "CDS_3389", - "location": [ - [ - "NC_000913", - 3592325, - "-", - 1317 - ] - ], - "md5": "fda312b5ed7e1c0761e0c32f4727ab27", - "parent_gene": "", - "protein_md5": "c5814737bb4fe183c9ad6a7ea8e039b1", - "protein_translation": "MKPLHYTASALALGLALMGNAQAVTTIPFWHSMEGELGKEVDSLAQRFNAENPDYKIVPTYKGNYEQNLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIKPVYDVFKEAGIQFDESQFVPTVSGYYSDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQDLADYAAKLKASGMKCGYASGWQGWIQLENFSAWNGLPFASKNNGFDGTDAVLEFNKPEQVKHIAMLEEMNKKGDFSYVGRKDESTEKFYNGDCAMTTASSGSLANIREYAKFNYGVGMMPYDADAKDAPQNAIIGGASLWVMQGKDKETYTGVAKFLDFLAKPENAAEWHQKTGYLPITKAAYDLTREQGFYEKNPGADTATRQMLNKPPLPFTKGLRLGNMPQIRVIVDEELESVWTGKKTPQQALDTAVERGNQLLRRFEKSTKS", - "protein_translation_length": 438, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3419" - ], - [ - "gene_synonym", - "ASAP:ABE-0011282" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P22731" - ], - [ - "gene_synonym", - "GI:90111594" - ], - [ - "gene_synonym", - "b3454" - ], - [ - "gene_synonym", - "EcoGene:EG10536" - ], - [ - "gene_synonym", - "NP_417911.4" - ], - [ - "gene_synonym", - "livF" - ], - [ - "gene_synonym", - "ECK3438" - ], - [ - "gene_synonym", - "GeneID:947961" - ] - ], - "dna_sequence": "ATGGAAAAAGTCATGTTGTCCTTTGACAAAGTCAGCGCCCACTACGGCAAAATCCAGGCGCTGCATGAGGTGAGCCTGCATATCAATCAGGGCGAGATTGTCACGCTGATTGGCGCGAACGGGGCGGGGAAAACCACCTTGCTCGGCACGTTATGCGGCGATCCGCGTGCCACCAGCGGGCGAATTGTGTTTGATGATAAAGACATTACCGACTGGCAGACAGCGAAAATCATGCGCGAAGCGGTGGCGATTGTCCCGGAAGGGCGTCGCGTCTTCTCGCGGATGACGGTGGAAGAGAACCTGGCGATGGGCGGTTTTTTTGCTGAACGCGACCAGTTCCAGGAGCGCATAAAGTGGGTGTATGAGCTGTTTCCACGTCTGCATGAGCGCCGTATTCAGCGGGCGGGCACCATGTCCGGCGGTGAACAGCAGATGCTGGCGATTGGTCGTGCGCTGATGAGCAACCCGCGTTTGCTACTGCTTGATGAGCCATCGCTCGGTCTTGCGCCGATTATCATCCAGCAAATTTTCGACACCATCGAGCAGCTGCGCGAGCAGGGGATGACTATCTTTCTCGTCGAGCAGAACGCCAACCAGGCGCTAAAGCTGGCGGATCGCGGCTACGTGCTGGAAAACGGCCATGTAGTGCTTTCCGATACTGGTGATGCGCTGCTGGCGAATGAAGCGGTGAGAAGTGCGTATTTAGGCGGGTAA", - "dna_sequence_length": 714, - "functions": [ - "branched-chain amino acid ABC transporter ATPase" - ], - "id": "CDS_3390", - "location": [ - [ - "NC_000913", - 3593437, - "-", - 714 - ] - ], - "md5": "e534b9573947b33efa51c60b5385ff6d", - "parent_gene": "", - "protein_md5": "a75bb78a32959f18e323d79b169ab321", - "protein_translation": "MEKVMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDALLANEAVRSAYLGG", - "protein_translation_length": 237, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011284" - ], - [ - "gene_synonym", - "NP_417912.1" - ], - [ - "gene_synonym", - "GeneID:947967" - ], - [ - "gene_synonym", - "b3455" - ], - [ - "gene_synonym", - "EcoGene:EG10537" - ], - [ - "gene_synonym", - "livG" - ], - [ - "gene_synonym", - "hrbB" - ], - [ - "gene_synonym", - "hrbC" - ], - [ - "gene_synonym", - "hrbD" - ], - [ - "gene_synonym", - "ECK3439" - ], - [ - "gene_synonym", - "GI:16131327" - ], - [ - "gene_synonym", - "JW3420" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9S7" - ] - ], - "dna_sequence": "ATGAGTCAGCCATTATTATCTGTTAACGGCCTGATGATGCGCTTCGGCGGCCTGCTGGCGGTGAACAACGTCAATCTTGAACTGTACCCGCAGGAGATCGTCTCGTTAATCGGCCCTAACGGTGCCGGAAAAACCACGGTTTTTAACTGTCTGACCGGATTCTACAAACCCACCGGCGGCACCATTTTACTGCGCGATCAGCACCTGGAAGGTTTACCGGGGCAGCAAATTGCCCGCATGGGCGTGGTGCGCACCTTCCAGCATGTGCGTCTGTTCCGTGAAATGACGGTAATTGAAAACCTGCTGGTGGCGCAGCATCAGCAACTGAAAACCGGGCTGTTCTCTGGCCTGTTGAAAACGCCATCCTTCCGTCGCGCCCAGAGCGAAGCGCTCGACCGCGCCGCGACCTGGCTTGAGCGCATTGGTTTGCTGGAACACGCCAACCGTCAGGCGAGTAACCTGGCCTATGGTGACCAGCGCCGTCTTGAGATTGCCCGCTGCATGGTGACGCAGCCGGAGATTTTAATGCTCGACGAACCTGCGGCAGGTCTTAACCCGAAAGAGACGAAAGAGCTGGATGAGCTGATTGCCGAACTGCGCAATCATCACAACACCACTATCTTGTTGATTGAACACGATATGAAGCTGGTGATGGGAATTTCGGACCGAATTTACGTGGTCAATCAGGGGACGCCGCTGGCAAACGGTACGCCGGAGCAGATCCGTAATAACCCGGACGTGATCCGTGCCTATTTAGGTGAGGCATAA", - "dna_sequence_length": 768, - "functions": [ - "branched-chain amino acid ABC transporter ATPase" - ], - "id": "CDS_3391", - "location": [ - [ - "NC_000913", - 3594206, - "-", - 768 - ] - ], - "md5": "1adcaeec36cb140178f2da84e2b49360", - "parent_gene": "", - "protein_md5": "5ae0816c961f60a72196781e72d7205e", - "protein_translation": "MSQPLLSVNGLMMRFGGLLAVNNVNLELYPQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEQIRNNPDVIRAYLGEA", - "protein_translation_length": 255, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011287" - ], - [ - "gene_synonym", - "GeneID:947966" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P22729" - ], - [ - "gene_synonym", - "ECK3440" - ], - [ - "gene_synonym", - "b3456" - ], - [ - "gene_synonym", - "EcoGene:EG10541" - ], - [ - "gene_synonym", - "JW3421" - ], - [ - "gene_synonym", - "GI:16131328" - ], - [ - "gene_synonym", - "NP_417913.1" - ], - [ - "gene_synonym", - "livM" - ] - ], - "dna_sequence": "ATGAAACCGATGCATATTGCAATGGCGCTGCTCTCTGCCGCGATGTTCTTTGTGCTGGCGGGCGTCTTTATGGGCGTGCAACTGGAGCTGGATGGCACCAAACTGGTGGTCGACACGGCTTCGGATGTCCGTTGGCAGTGGGTGTTTATCGGCACGGCGGTGGTCTTTTTCTTCCAGCTTTTGCGACCGGCTTTCCAGAAAGGGTTGAAAAGCGTTTCCGGACCGAAGTTTATTCTGCCCGCCATTGATGGCTCCACGGTGAAGCAGAAACTGTTCCTCGTGGCGCTGTTGGTGCTTGCGGTGGCGTGGCCGTTTATGGTTTCACGCGGGACGGTGGATATTGCCACCCTGACCATGATCTACATTATCCTCGGTCTCGGGCTGAACGTGGTTGTTGGTCTTTCTGGTCTGCTGGTGCTGGGGTACGGCGGTTTTTACGCCATCGGCGCTTACACTTTTGCGCTGCTCAATCACTATTACGGCTTGGGCTTCTGGACCTGCCTGCCGATTGCTGGATTAATGGCAGCGGCGGCGGGCTTCCTGCTCGGTTTTCCGGTGCTGCGTTTGCGCGGTGACTATCTGGCGATCGTTACCCTCGGTTTCGGCGAAATTGTGCGCATATTGCTGCTCAATAACACCGAAATTACCGGCGGCCCGAACGGAATCAGTCAGATCCCGAAACCGACACTCTTCGGACTCGAGTTCAGCCGTACCGCTCGTGAAGGCGGCTGGGACACGTTCAGTAATTTCTTTGGCCTGAAATACGATCCCTCCGATCGTGTCATCTTCCTCTACCTGGTGGCGTTGCTGCTGGTGGTGCTAAGCCTGTTTGTCATTAACCGCCTGCTGCGGATGCCGCTGGGGCGTGCGTGGGAAGCGTTGCGTGAAGATGAAATCGCCTGCCGTTCGCTGGGCTTAAGCCCGCGTCGTATCAAGCTGACTGCCTTTACCATAAGTGCCGCGTTTGCCGGTTTTGCCGGAACGCTGTTTGCGGCGCGTCAGGGCTTTGTCAGCCCGGAATCCTTCACCTTTGCCGAATCGGCGTTTGTGCTGGCGATAGTGGTGCTCGGCGGTATGGGCTCGCAATTTGCGGTGATTCTGGCGGCAATTTTGCTGGTGGTGTCGCGCGAGTTGATGCGTGATTTCAACGAATACAGCATGTTAATGCTCGGTGGTTTGATGGTGCTGATGATGATCTGGCGTCCGCAGGGCTTGCTGCCCATGACGCGCCCGCAACTGAAGCTGAAAAACGGCGCAGCGAAAGGAGAGCAGGCATGA", - "dna_sequence_length": 1278, - "functions": [ - "branched-chain amino acid ABC transporter permease" - ], - "id": "CDS_3392", - "location": [ - [ - "NC_000913", - 3595480, - "-", - 1278 - ] - ], - "md5": "024844d11c27d19f4d7d33eda2fc9128", - "parent_gene": "", - "protein_md5": "7d13e3f23851d016af581d6dfed098b4", - "protein_translation": "MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDTASDVRWQWVFIGTAVVFFFQLLRPAFQKGLKSVSGPKFILPAIDGSTVKQKLFLVALLVLAVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLGFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGISQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSMLMLGGLMVLMMIWRPQGLLPMTRPQLKLKNGAAKGEQA", - "protein_translation_length": 425, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10538" - ], - [ - "gene_synonym", - "ASAP:ABE-0011290" - ], - [ - "gene_synonym", - "NP_417914.1" - ], - [ - "gene_synonym", - "ECK3441" - ], - [ - "gene_synonym", - "b3457" - ], - [ - "gene_synonym", - "hrbB" - ], - [ - "gene_synonym", - "hrbC" - ], - [ - "gene_synonym", - "hrbD" - ], - [ - "gene_synonym", - "GeneID:947965" - ], - [ - "gene_synonym", - "JW3422" - ], - [ - "gene_synonym", - "GI:16131329" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEX7" - ], - [ - "gene_synonym", - "livH" - ] - ], - "dna_sequence": "ATGTCTGAGCAGTTTTTGTATTTCTTGCAGCAGATGTTTAACGGCGTCACGCTGGGCAGTACCTACGCGCTGATAGCCATCGGCTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTACCGCCCGGTGCGTAACTCTAAGCGCCTGATTGCACTCATCTCTGCAATCGGTATGTCCATCTTCCTGCAAAACTACGTCAGCCTGACCGAAGGTTCGCGCGACGTGGCGCTGCCGAGCCTGTTTAACGGTCAGTGGGTGGTGGGGCATAGCGAAAACTTCTCTGCCTCTATTACCACCATGCAGGCGGTGATCTGGATTGTTACCTTCCTCGCCATGCTGGCGCTGACGATTTTCATTCGCTATTCCCGCATGGGTCGCGCGTGTCGTGCCTGCGCGGAAGATCTGAAAATGGCGAGTCTGCTTGGCATTAACACCGACCGGGTGATTGCGCTGACCTTTGTGATTGGCGCGGCGATGGCGGCGGTGGCGGGTGTGCTGCTCGGTCAGTTCTACGGCGTCATTAACCCCTACATCGGCTTTATGGCCGGGATGAAAGCCTTTACCGCGGCGGTGCTCGGTGGGATTGGCAGCATTCCGGGAGCGATGATTGGCGGCCTGATTCTGGGGATTGCGGAGGCGCTCTCTTCTGCCTATCTGAGTACGGAATATAAAGATGTGGTCTCATTCGCCCTGCTGATTCTGGTGCTGCTGGTGATGCCGACCGGTATTCTGGGTCGCCCGGAGGTAGAGAAAGTATGA", - "dna_sequence_length": 927, - "functions": [ - "branched-chain amino acid ABC transporter permease" - ], - "id": "CDS_3393", - "location": [ - [ - "NC_000913", - 3596403, - "-", - 927 - ] - ], - "md5": "810adac079d457a5883b3ff53e7f40b6", - "parent_gene": "", - "protein_md5": "f3b3126d27a413d02b5c6fee54c114c0", - "protein_translation": "MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWLLVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSFALLILVLLVMPTGILGRPEVEKV", - "protein_translation_length": 308, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3458" - ], - [ - "gene_synonym", - "ASAP:ABE-0011292" - ], - [ - "gene_synonym", - "GeneID:947964" - ], - [ - "gene_synonym", - "ECK3442" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04816" - ], - [ - "gene_synonym", - "EcoGene:EG10540" - ], - [ - "gene_synonym", - "hrbB" - ], - [ - "gene_synonym", - "hrbC" - ], - [ - "gene_synonym", - "hrbD" - ], - [ - "gene_synonym", - "NP_417915.1" - ], - [ - "gene_synonym", - "JW3423" - ], - [ - "gene_synonym", - "GI:16131330" - ], - [ - "gene_synonym", - "livK" - ] - ], - "dna_sequence": "ATGAAACGGAATGCGAAAACTATCATCGCAGGGATGATTGCACTGGCAATTTCACACACCGCTATGGCTGACGATATTAAAGTCGCCGTTGTCGGCGCGATGTCCGGCCCGATTGCCCAGTGGGGCGATATGGAATTTAACGGCGCGCGTCAGGCAATTAAAGACATTAATGCCAAAGGGGGAATTAAGGGCGATAAACTGGTTGGCGTGGAATATGACGACGCATGCGACCCGAAACAAGCCGTTGCGGTCGCCAACAAAATCGTTAATGACGGCATTAAATACGTTATTGGTCATCTGTGTTCTTCTTCTACCCAGCCTGCGTCAGATATCTATGAAGACGAAGGTATTCTGATGATCTCGCCGGGAGCGACCAACCCGGAGCTGACCCAACGCGGTTATCAACACATTATGCGTACTGCCGGGCTGGACTCTTCCCAGGGGCCAACGGCGGCAAAATACATTCTTGAGACGGTGAAGCCCCAGCGCATCGCCATCATTCACGACAAACAACAGTATGGCGAAGGGCTGGCGCGTTCGGTGCAGGACGGGCTGAAAGCGGCTAACGCCAACGTCGTCTTCTTCGACGGTATTACCGCCGGGGAGAAAGATTTCTCCGCGCTGATCGCCCGCCTGAAAAAAGAAAACATCGACTTCGTTTACTACGGCGGTTACTACCCGGAAATGGGGCAGATGCTGCGCCAGGCCCGTTCCGTTGGCCTGAAAACCCAGTTTATGGGGCCGGAAGGTGTGGGTAATGCGTCGTTGTCGAACATTGCCGGTGATGCCGCCGAAGGCATGTTGGTCACTATGCCAAAACGCTATGACCAGGATCCGGCAAACCAGGGCATCGTTGATGCGCTGAAAGCAGACAAGAAAGATCCGTCCGGGCCTTATGTCTGGATCACCTACGCGGCGGTGCAATCTCTGGCGACTGCCCTTGAGCGTACCGGCAGCGATGAGCCGCTGGCGCTGGTGAAAGATTTAAAAGCTAACGGTGCAAACACCGTGATTGGGCCGCTGAACTGGGATGAAAAAGGCGATCTTAAGGGATTTGATTTTGGTGTCTTCCAGTGGCACGCCGACGGTTCATCCACGGCAGCCAAGTGA", 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"GeneID:947963" - ], - [ - "gene_synonym", - "ECK3443" - ], - [ - "gene_synonym", - "JW3424" - ], - [ - "gene_synonym", - "EcoGene:EG12211" - ], - [ - "gene_synonym", - "GI:16131331" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37613" - ], - [ - "gene_synonym", - "livL" - ], - [ - "gene_synonym", - "panM" - ] - ], - "dna_sequence": "ATGAAGCTGACCATCATTCGATTAGAAAAATTTAGCGACCAAGACCGGATTGACCTGCAAAAGATCTGGCCGGAGTATTCCCCTTCCTCGTTACAGGTTGACGATAACCACCGTATCTACGCCGCGCGTTTTAACGAGCGCCTGCTCGCTGCCGTGCGGGTAACCTTAAGCGGCACCGAGGGAGCACTGGATTCCCTGCGCGTGCGGGAAGTCACCCGCCGTCGCGGTGTGGGGCAATATCTGCTGGAAGAGGTTTTGCGTAACAATCCTGGCGTTTCATGCTGGTGGATGGCGGATGCAGGCGTGGAAGATCGCGGTGTGATGACGGCGTTTATGCAGGCGCTGGGGTTTACGGCACAACAGGGCGGCTGGGAGAAGTGTTAA", - "dna_sequence_length": 384, - "functions": [ - "PanD autocleavage accelerator, panothenate synthesis" - ], - "id": "CDS_3395", - "location": [ - [ - "NC_000913", - 3597984, - "+", - 384 - ] - ], - "md5": "57c6611f3b186cc61c60e92e2fe19c60", - "parent_gene": "", - "protein_md5": "c6182ce9fafa6ca12a98731074ee9a10", - "protein_translation": "MKLTIIRLEKFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARFNERLLAAVRVTLSGTEGALDSLRVREVTRRRGVGQYLLEEVLRNNPGVSCWWMADAGVEDRGVMTAFMQALGFTAQQGGWEKC", - "protein_translation_length": 127, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10539" - ], - [ - "gene_synonym", - "ECK3444" - ], - [ - "gene_synonym", - "ASAP:ABE-0011299" - ], - [ - "gene_synonym", - "GeneID:947971" - ], - [ - "gene_synonym", - "b3460" - ], - [ - "gene_synonym", - "JW3425" - ], - [ - "gene_synonym", - "hrbB" - ], - [ - "gene_synonym", - "hrbC" - ], - [ - "gene_synonym", - "hrbD" - ], - [ - "gene_synonym", - "YP_026223.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD96" - ], - [ - "gene_synonym", - "GI:49176358" - ], - [ - "gene_synonym", - "livJ" - ] - ], - "dna_sequence": "ATGAACATAAAGGGTAAAGCGTTACTGGCAGGATGTATCGCGCTGGCATTCAGCAATATGGCTCTGGCAGAAGATATTAAAGTCGCGGTCGTGGGCGCAATGTCCGGTCCGGTTGCGCAGTACGGTGACCAGGAGTTTACCGGCGCAGAGCAGGCGGTTGCGGATATCAACGCTAAAGGCGGCATTAAAGGCAACAAACTGCAAATCGTAAAATATGACGATGCCTGTGACCCGAAACAGGCGGTTGCGGTGGCGAACAAAGTCGTTAACGACGGCATTAAATATGTGATTGGTCACCTCTGTTCTTCATCAACGCAGCCTGCGTCTGACATCTACGAAGACGAAGGCATTTTAATGATCACCCCAGCGGCAACCGCGCCGGAGCTGACCGCCCGTGGCTATCAGCTGATCCTGCGCACCACCGGCCTGGACTCCGACCAGGGGCCGACGGCGGCGAAATATATTCTTGAGAAAGTGAAACCGCAGCGTATTGCTATCGTTCACGACAAACAGCAATACGGCGAAGGTCTGGCGCGAGCGGTGCAGGACGGCCTGAAGAAAGGCAATGCAAACGTGGTGTTCTTTGATGGCATCACCGCCGGGGAAAAAGATTTCTCAACGCTGGTGGCGCGTCTGAAAAAAGAGAATATCGACTTCGTTTACTACGGCGGTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCAGTTTATGGGGCCGGAAGGTGTGGCTAACGTTTCGCTGTCTAACATTGCGGGCGAATCAGCGGAAGGGCTGCTGGTGACCAAGCCGAAGAACTACGATCAGGTTCCGGCGAACAAACCCATTGTTGACGCGATCAAAGCGAAAAAACAGGACCCAAGTGGCGCATTCGTTTGGACCACCTACGCCGCGCTGCAATCTTTGCAGGCGGGCCTGAATCAGTCTGACGATCCGGCTGAAATCGCCAAATACCTGAAAGCGAACTCCGTGGATACCGTAATGGGACCGCTGACCTGGGATGAGAAAGGCGATCTGAAAGGCTTTGAGTTCGGCGTATTTGACTGGCACGCCAACGGCACGGCGACCGATGCGAAGTAA", 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- "GeneID:947970" - ], - [ - "gene_synonym", - "NP_417918.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGB3" - ], - [ - "gene_synonym", - "b3461" - ], - [ - "gene_synonym", - "JW3426" - ], - [ - "gene_synonym", - "fam" - ], - [ - "gene_synonym", - "GI:16131333" - ], - [ - "gene_synonym", - "rpoH" - ], - [ - "gene_synonym", - "hin" - ] - ], - "dna_sequence": "ATGACTGACAAAATGCAAAGTTTAGCTTTAGCCCCAGTTGGCAACCTGGATTCCTACATCCGGGCAGCTAACGCGTGGCCGATGTTGTCGGCTGACGAGGAGCGGGCGCTGGCTGAAAAGCTGCATTACCATGGCGATCTGGAAGCAGCTAAAACGCTGATCCTGTCTCACCTGCGGTTTGTTGTTCATATTGCTCGTAATTATGCGGGCTATGGCCTGCCACAGGCGGATTTGATTCAGGAAGGTAACATCGGCCTGATGAAAGCAGTGCGCCGTTTCAACCCGGAAGTGGGTGTGCGCCTGGTCTCCTTCGCCGTTCACTGGATCAAAGCAGAGATCCACGAATACGTTCTGCGTAACTGGCGTATCGTCAAAGTTGCGACCACCAAAGCGCAGCGCAAACTGTTCTTCAACCTGCGTAAAACCAAGCAGCGTCTGGGCTGGTTTAACCAGGATGAAGTCGAAATGGTGGCCCGTGAACTGGGCGTAACCAGCAAAGACGTACGTGAGATGGAATCACGTATGGCGGCACAGGACATGACCTTTGACCTGTCTTCCGACGACGATTCCGACAGCCAGCCGATGGCTCCGGTGCTCTATCTGCAGGATAAATCATCTAACTTTGCCGACGGCATTGAAGATGATAACTGGGAAGAGCAGGCGGCAAACCGTCTGACCGACGCGATGCAGGGTCTGGACGAACGCAGCCAGGACATCATCCGTGCGCGCTGGCTGGACGAAGACAACAAGTCCACGTTGCAGGAACTGGCTGACCGTTACGGCGTTTCCGCTGAGCGTGTACGCCAGCTGGAAAAGAACGCGATGAAAAAATTGCGTGCTGCCATTGAAGCGTAA", - "dna_sequence_length": 855, - "functions": [ - "RNA polymerase, sigma 32 (sigma H) factor" - ], - "id": "CDS_3397", - "location": [ - [ - "NC_000913", - 3600783, - "-", - 855 - ] - ], - "md5": "f9e2da343c7b895ace8f5cd90c54df37", - "parent_gene": "", - "protein_md5": "80fc84758c6f971322646c5516b8915f", - "protein_translation": "MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA", - "protein_translation_length": 284, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417919.1" - ], - [ - "gene_synonym", - "GeneID:947969" - ], - [ - "gene_synonym", - "ECK3446" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC30" - ], - [ - "gene_synonym", - "b3462" - ], - [ - "gene_synonym", - "JW3427" - ], - [ - "gene_synonym", - "ftsS" - ], - [ - "gene_synonym", - "EcoGene:EG10345" - ], - [ - "gene_synonym", - "ASAP:ABE-0011311" - ], - [ - "gene_synonym", - "GI:16131334" - ], - [ - "gene_synonym", - "ftsX" - ] - ], - "dna_sequence": "ATGAATAAGCGCGATGCAATCAATCATATTCGGCAGTTTGGCGGGCGTCTTGATCGCTTCCGTAAATCGGTCGGCGGCTCAGGCGACGGCGGTCGTAACGCACCAAAACGCGCGAAATCCTCGCCAAAACCGGTAAATCGCAAAACCAACGTTTTCAACGAACAGGTGCGCTATGCCTTCCACGGCGCATTGCAGGATCTGAAAAGCAAACCGTTCGCCACGTTTTTAACGGTGATGGTTATCGCCATTTCTCTGACGCTGCCCAGCGTCTGTTATATGGTGTACAAAAACGTTAACCAGGCGGCGACGCAGTATTATCCGTCACCGCAAATCACTGTTTATCTGCAAAAAACGCTGGACGATGACGCTGCTGCGGGCGTGGTGGCACAGTTGCAGGCCGAGCAAGGCGTGGAGAAAGTGAACTATCTTTCTCGTGAAGACGCACTGGGTGAGTTCCGTAACTGGTCTGGTTTTGGTGGTGCGCTGGATATGCTGGAAGAAAACCCGCTTCCGGCAGTGGCGGTGGTGATCCCGAAACTCGATTTCCAGGGGACGGAATCACTGAATACGCTGCGTGATCGTATCACGCAGATTAACGGCATTGACGAAGTGCGGATGGATGACAGCTGGTTTGCCCGTCTGGCGGCGTTGACCGGGCTGGTCGGGCGCGTTTCGGCGATGATCGGCGTGTTGATGGTGGCGGCCGTGTTCCTCGTCATCGGTAACAGTGTGCGTCTGAGTATCTTTGCTCGCCGTGACTCCATTAACGTACAGAAACTGATTGGTGCGACAGATGGATTCATCCTGCGCCCGTTCCTGTATGGTGGCGCACTGCTGGGATTTTCTGGCGCATTGTTGTCATTAATTTTGTCAGAAATTCTGGTGCTGCGATTGTCATCGGCGGTTGCGGAAGTGGCACAGGTTTTCGGAACGAAGTTTGATATCAATGGCTTATCATTCGATGAATGCCTGCTATTGCTGCTGGTATGCTCGATGATTGGCTGGGTGGCAGCGTGGCTTGCCACGGTACAACATTTACGCCACTTTACGCCTGAATAA", 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"b3463" - ], - [ - "gene_synonym", - "NP_417920.1" - ], - [ - "gene_synonym", - "GI:16131335" - ], - [ - "gene_synonym", - "ASAP:ABE-0011313" - ], - [ - "gene_synonym", - "EcoGene:EG10340" - ] - ], - "dna_sequence": "ATGATTCGCTTTGAACATGTCAGCAAGGCTTATCTCGGTGGGAGACAGGCGCTGCAGGGCGTTACGTTCCATATGCAGCCGGGTGAGATGGCGTTTCTGACCGGTCATTCCGGCGCAGGGAAAAGTACCCTCCTGAAGCTGATCTGTGGGATTGAGCGGCCCAGCGCCGGGAAAATCTGGTTTAGCGGCCATGACATCACGCGTCTGAAAAACCGTGAAGTTCCGTTTCTGCGCCGCCAGATTGGCATGATTTTCCAGGATCACCATCTACTGATGGACCGTACTGTCTACGATAACGTGGCGATCCCGCTGATTATCGCCGGTGCCAGCGGTGACGATATTCGTCGCCGGGTGTCGGCGGCGCTGGATAAAGTCGGGCTACTGGACAAAGCGAAGAACTTCCCTATTCAGCTTTCGGGCGGTGAACAACAGCGTGTTGGCATTGCCCGCGCGGTGGTGAACAAGCCCGCGGTACTGCTGGCGGACGAACCGACTGGTAACCTGGACGACGCGCTGTCGGAAGGCATTTTACGTCTGTTTGAAGAGTTTAACCGCGTTGGGGTAACCGTATTGATGGCAACGCACGACATCAACCTGATCTCGCGGCGTTCCTATCGCATGCTCACCCTGAGCGATGGTCACTTGCATGGAGGCGTGGGCCATGAATAA", - "dna_sequence_length": 669, - "functions": [ - "cell division ATP-binding protein" - ], - "id": "CDS_3399", - "location": [ - [ - "NC_000913", - 3602747, - "-", - 669 - ] - ], - "md5": "f30b90a7dfc10676884a11c1b46c6c82", - "parent_gene": "", - "protein_md5": "37921dab3e2edc0b45927b528e3c125e", - "protein_translation": "MIRFEHVSKAYLGGRQALQGVTFHMQPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDINLISRRSYRMLTLSDGHLHGGVGHE", - "protein_translation_length": 222, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P10121" - ], - [ - "gene_synonym", - "ECK3448" - ], - [ - "gene_synonym", - "NP_417921.1" - ], - [ - "gene_synonym", - "b3464" - ], - [ - "gene_synonym", - "ASAP:ABE-0011318" - ], - [ - "gene_synonym", - "EcoGene:EG10346" - ], - [ - "gene_synonym", - "GeneID:947978" - ], - [ - "gene_synonym", - "JW3429" - ], - [ - "gene_synonym", - "ftsY" - ], - [ - "gene_synonym", - "GI:16131336" - ] - ], - "dna_sequence": "ATGGCGAAAGAAAAAAAACGTGGCTTTTTTTCCTGGCTGGGCTTTGGTCAAAAAGAGCAGACCCCGGAAAAAGAGACAGAAGTTCAGAATGAACAACCGGTTGTAGAAGAAATCGTTCAGGCGCAAGAGCCTGTGAAGGCCTCTGAACAAGCCGTTGAAGAGCAGCCGCAAGCGCATACTGAAGCCGAGGCGGAAACTTTTGCTGCCGACGTTGTGGAAGTCACTGAACAGGTTGCTGAAAGTGAAAAAGCGCAGCCTGAAGCGGAAGTCGTTGCACAGCCGGAACCGGTCGTAGAAGAAACGCCGGAGCCAGTGGCTATCGAACGTGAAGAGCTGCCGTTGCCGGAAGACGTCAACGCCGAAGCGGTTTCGCCAGAAGAGTGGCAGGCTGAAGCGGAAACCGTAGAGATTGTCGAAGCGGCGGAAGAAGAAGCGGCTAAAGAAGAAATTACCGACGAAGAGCTGGAAACGGCGCTGGCTGCCGAAGCGGCAGAAGAGGCGGTGATGGTGGTTCCTCCGGCAGAAGAAGAGCAGCCGGTGGAAGAAATCGCTCAGGAGCAGGAAAAACCGACCAAAGAAGGTTTTTTCGCGCGCCTGAAACGCAGCCTGTTAAAAACCAAAGAAAATCTCGGTTCCGGATTTATCAGCCTGTTCCGCGGTAAAAAAATCGACGATGATCTGTTTGAGGAGCTGGAAGAGCAGCTTTTGATCGCCGATGTGGGTGTGGAAACCACACGTAAAATTATCACCAATCTGACGGAAGGCGCATCCCGCAAGCAGCTTCGTGACGCCGAGGCGCTCTATGGCCTGCTGAAAGAAGAGATGGGCGAGATTCTGGCGAAAGTCGATGAGCCGCTGAATGTTGAAGGCAAAGCGCCGTTTGTGATCCTGATGGTGGGCGTCAACGGTGTGGGTAAAACCACGACGATTGGTAAGCTGGCGCGTCAGTTTGAGCAGCAGGGTAAATCGGTGATGCTGGCGGCGGGTGATACTTTCCGTGCAGCTGCGGTTGAACAGCTTCAGGTCTGGGGTCAGCGCAACAATATTCCGGTGATTGCCCAGCATACCGGGGCGGATTCCGCCTCTGTTATCTTCGACGCCATTCAGGCAGCTAAAGCGCGTAATATCGACGTCCTGATTGCCGATACAGCCGGACGCCTGCAGAACAAATCGCACCTGATGGAAGAGTTGAAGAAAATCGTCCGCGTGATGAAGAAACTCGACGTTGAAGCGCCGCATGAAGTTATGCTGACTATTGATGCCAGCACCGGGCAGAACGCGGTAAGCCAGGCCAAACTGTTCCATGAAGCCGTTGGCTTAACCGGCATCACGCTAACGAAACTGGACGGCACGGCGAAAGGCGGGGTAATTTTCTCGGTGGCTGACCAGTTTGGTATCCCTATCCGCTACATTGGTGTCGGCGAACGTATTGAGGATTTGCGTCCGTTTAAGGCGGACGACTTTATAGAGGCACTTTTTGCCCGAGAGGATTAA", 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"gene_synonym", - "rsmD" - ], - [ - "gene_synonym", - "GeneID:947977" - ], - [ - "gene_synonym", - "JW3430" - ], - [ - "gene_synonym", - "b3465" - ], - [ - "gene_synonym", - "NP_417922.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011321" - ], - [ - "gene_synonym", - "EcoGene:EG10343" - ], - [ - "gene_synonym", - "GI:16131337" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADX9" - ] - ], - "dna_sequence": "ATGAAAAAACCGAATCATTCCGGCAGCGGCCAAATCCGCATTATTGGCGGGCAGTGGCGAGGCCGTAAACTCCCGGTTCCTGATAGCCCAGGTCTGCGCCCCACCACCGACCGCGTACGCGAAACGTTGTTTAACTGGCTGGCTCCGGTCATTGTTGACGCCCAATGTCTGGATTGCTTCGCCGGGAGCGGCGCGCTGGGGCTGGAAGCGTTATCGCGCTACGCTGCGGGGGCAACGTTGATTGAGATGGATCGCGCGGTTTCTCAGCAGTTAATTAAGAATCTGGCGACACTAAAAGCAGGCAATGCACGCGTGGTGAACAGCAACGCGATGTCATTCCTGGCGCAAAAAGGTACACCGCATAATATCGTGTTTGTCGATCCACCGTTCCGCCGTGGCTTGTTAGAAGAGACGATAAATTTACTGGAAGATAACGGCTGGCTGGCTGACGAAGCCCTGATTTATGTCGAAAGCGAAGTCGAAAACGGTCTGCCCACTGTTCCAGCAAACTGGTCATTACATCGGGAAAAAGTGGCGGGTCAGGTGGCTTATCGGCTGTATCAACGCGAAGCACAAGGAGAAAGTGATGCTGATTAA", - "dna_sequence_length": 597, - "functions": [ - "16S rRNA m(2)G966 methyltransferase, SAM-dependent" - ], - "id": "CDS_3401", - "location": [ - [ - "NC_000913", - 3604393, - "+", - 597 - ] - ], - "md5": "517a025e21efb079e8af9cd37d3ebd4b", - "parent_gene": "", - "protein_md5": "6b217f4d5af8d85ecdd645e88f396cda", - "protein_translation": "MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD", - "protein_translation_length": 198, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417923.1" - ], - [ - "gene_synonym", - "GeneID:947976" - ], - [ - "gene_synonym", - "EcoGene:EG12212" - ], - [ - "gene_synonym", - "GI:16131338" - ], - [ - "gene_synonym", - "ECK3450" - ], - [ - "gene_synonym", - "yhhL" - ], - [ - "gene_synonym", - "JW5683" - ], - [ - "gene_synonym", - "b3466" - ], - [ - "gene_synonym", - "ASAP:ABE-0011323" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37614" - ] - ], - "dna_sequence": "ATGCTGATTAATATTGGTCGTTTGTTAATGCTCTGCGTTTGGGGATTTTTAATCCTCAACCTGGTGCATCCCTTCCCACGCCCGCTGAATATCTTCGTTAACGTGGCGCTGATTTTTACCGTGCTGATGCATGGTATGCAGCTGGCGCTATTGAAATCCACTTTACCGAAAGATGGCCCGCAGATGACCACCGCCGAAAAGGTACGGATTTTCCTTTTCGGCGTGTTTGAACTGCTGGCCTGGCAGAAGAAATTTAAAGTTAAAAAATAA", - "dna_sequence_length": 270, - "functions": [ - "DUF1145 family protein" - ], - "id": "CDS_3402", - "location": [ - [ - "NC_000913", - 3604979, - "+", - 270 - ] - ], - "md5": "01f5ac36241306c23f25291211f3478a", - "parent_gene": "", - "protein_md5": "731798065aac5c810116fb4002e87f6c", - "protein_translation": "MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMHGMQLALLKSTLPKDGPQMTTAEKVRIFLFGVFELLAWQKKFKVKK", - "protein_translation_length": 89, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12213" - ], - [ - "gene_synonym", - "GeneID:947975" - ], - [ - "gene_synonym", - "yhhM" - ], - [ - "gene_synonym", - "ECK3451" - ], - [ - "gene_synonym", - "GI:16131339" - ], - [ - "gene_synonym", - "JW3432" - ], - [ - "gene_synonym", - "b3467" - ], - [ - "gene_synonym", - "NP_417924.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011325" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37615" - ] - ], - "dna_sequence": "ATGAGCAAACCACCTCTTTTCTTTATTGTTATCATTGGCTTAATTGTCGTCGCCGCATCGTTTCGTTTTATGCAACAGCGACGGGAAAAAGCTGATAATGATATGGCTCCGCTCCAGCAAAAGCTGGTGGTGGTGAGCAACAAGCGGGAAAAACCGATTAACGATCGCCGTTCGCGCCAGCAGGAAGTGACTCCGGCAGGCACCAGTATACGCTATGAGGCAAGCTTCAAACCGCAAAGCGGAGGAATGGAGCAGACGTTTCGCCTCGACGCCCAGCAGTACCACGCCCTGACAGTGGGCGATAAAGGTACGCTGAGCTATAAAGGAACGCGCTTTGTCAGCTTTGTAGGCGAACAATAA", - "dna_sequence_length": 360, - "functions": [ - "DUF2500 family protein" - ], - "id": "CDS_3403", - "location": [ - [ - "NC_000913", - 3605610, - "-", - 360 - ] - ], - "md5": "ffec33194d417a6b44c7f1be9eae336c", - "parent_gene": "", - "protein_md5": "7cee527f7c119ddd36f97f62295d0fcb", - "protein_translation": "MSKPPLFFIVIIGLIVVAASFRFMQQRREKADNDMAPLQQKLVVVSNKREKPINDRRSRQQEVTPAGTSIRYEASFKPQSGGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVGEQ", - "protein_translation_length": 119, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131340" - ], - [ - "gene_synonym", - "yhhN" - ], - [ - "gene_synonym", - "EcoGene:EG12214" - ], - [ - "gene_synonym", - "GeneID:947973" - ], - [ - "gene_synonym", - "JW3433" - ], - [ - "gene_synonym", - "ECK3452" - ], - [ - "gene_synonym", - "ASAP:ABE-0011329" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADI9" - ], - [ - "gene_synonym", - "NP_417925.1" - ], - [ - "gene_synonym", - "b3468" - ] - ], - "dna_sequence": "ATGCTTTGGTCGTTTATCGCTGTCTGTCTTTCCGCATGGCTATCTGTGGATGCATCGTATCGTGGGCCAACCTGGCAACGCTGGGTGTTTAAACCGTTAACCCTTCTTCTCCTGCTGTTACTGGCCTGGCAAGCGCCGATGTTCGACGCCATTAGCTATCTGGTGCTGGCAGGGCTGTGCGCCTCACTGCTGGGCGATGCGCTAACCCTGTTGCCACGTCAACGTCTGATGTACGCCATCGGCGCGTTTTTCCTCTCGCACCTGCTGTACACCATCTATTTCGCCAGTCAGATGACGCTCTCTTTCTTCTGGCCTCTACCACTGGTGCTGCTGGTTCTGGGTGCGCTGTTACTGGCGATTATCTGGACGCGCCTGGAAGAGTACCGTTGGCCTATCTGCACGTTTATCGGCATGACGCTGGTGATGGTGTGGCTGGCAGGTGAACTGTGGTTCTTCCGTCCGACCGCTCCGGCGCTCTCTGCGTTTGTTGGCGCTTCGTTGCTGTTTATCAGTAACTTTGTCTGGCTGGGGAGCCACTATCGCCGACGCTTCCGTGCGGATAACGCGATTGCTGCGGCCTGCTACTTTGCCGGTCACTTCCTGATCGTCCGCTCGCTGTATCTCTGA", - "dna_sequence_length": 627, - "functions": [ - "TMEM86 family putative inner membrane protein" - ], - "id": "CDS_3404", - "location": [ - [ - "NC_000913", - 3605751, - "+", - 627 - ] - ], - "md5": "fe39fac51b1de72e616f48cb93540b2e", - "parent_gene": "", - "protein_md5": "5f7576ae25377f28389d220901852c51", - "protein_translation": "MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQAPMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSFFWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALSAFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYL", - "protein_translation_length": 208, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12215" - ], - [ - "gene_synonym", - "yhhO" - ], - [ - "gene_synonym", - "ECK3453" - ], - [ - "gene_synonym", - "b3469" - ], - [ - "gene_synonym", - "GeneID:947972" - ], - [ - "gene_synonym", - "GI:16131341" - ], - [ - "gene_synonym", - "JW3434" - ], - [ - "gene_synonym", - "NP_417926.1" - ], - [ - "gene_synonym", - "zntA" - ], - [ - "gene_synonym", - "ASAP:ABE-0011332" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37617" - ] - ], - "dna_sequence": "ATGTCGACTCCTGACAATCACGGCAAGAAAGCCCCTCAATTTGCTGCGTTCAAACCGCTAACCACGGTACAGAACGCCAACGACTGTTGCTGCGACGGCGCATGTTCCAGCACGCCAACTCTCTCTGAAAACGTCTCCGGCACCCGCTATAGCTGGAAAGTCAGCGGCATGGACTGCGCCGCCTGTGCGCGCAAGGTAGAAAATGCCGTGCGCCAGCTTGCAGGCGTGAATCAGGTGCAGGTGTTGTTCGCCACCGAAAAACTGGTGGTCGATGCCGACAATGACATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTATTGGTGCACTGTTTATTGGCGCAACGGCTGAAGCTGCGATGGTGTTGCTGCTGTTTTTGATTGGTGAACGACTGGAAGGCTGGGCCGCCAGCCGCGCGCGTCAGGGCGTTAGCGCGTTAATGGCGCTGAAACCAGAAACCGCCACGCGCCTGCGTAAGGGTGAGCGGGAAGAGGTGGCGATTAACAGCCTGCGCCCTGGCGATGTGATTGAAGTCGCCGCAGGTGGGCGTTTGCCTGCCGACGGTAAACTGCTCTCACCGTTTGCCAGTTTTGATGAAAGCGCCCTGACCGGCGAATCCATTCCGGTGGAGCGCGCAACGGGCGATAAAGTCCCTGCTGGTGCCACCAGCGTAGACCGTCTGGTGACGTTGGAAGTGCTGTCAGAACCGGGAGCCAGCGCCATTGACCGGATTCTGAAACTGATCGAAGAAGCCGAAGAGCGTCGCGCTCCCATTGAGCGGTTTATCGACCGTTTCAGCCGTATCTATACGCCCGCGATTATGGCCGTCGCTCTGCTGGTGACGCTGGTGCCACCGCTGCTGTTTGCCGCCAGCTGGCAGGAGTGGATTTATAAAGGGCTGACGCTGCTGCTGATTGGCTGCCCGTGTGCGTTAGTTATCTCAACGCCTGCGGCGATTACCTCCGGGCTGGCGGCGGCAGCGCGTCGTGGGGCGTTGATTAAAGGCGGAGCGGCGCTGGAACAGCTGGGTCGTGTTACTCAGGTGGCGTTTGATAAAACCGGTACGCTGACCGTCGGTAAACCGCGCGTTACCGCGATTCATCCGGCAACGGGTATTAGTGAATCTGAACTGCTGACACTGGCGGCGGCGGTCGAGCAAGGCGCGACGCATCCACTGGCGCAAGCCATCGTACGCGAAGCACAGGTTGCTGAACTCGCCATTCCCACCGCCGAATCACAGCGGGCGCTGGTCGGGTCTGGCATTGAAGCGCAGGTTAACGGTGAGCGCGTATTGATTTGCGCTGCCGGGAAACATCCCGCTGATGCATTTACTGGTTTAATTAACGAACTGGAAAGCGCCGGGCAAACGGTAGTGCTGGTAGTACGTAACGATGACGTGCTTGGTGTCATTGCGTTACAGGATACCCTGCGCGCCGATGCTGCAACTGCCATCAGTGAACTGAACGCGCTGGGCGTCAAAGGGGTGATCCTCACCGGCGATAATCCACGCGCAGCGGCGGCAATTGCCGGGGAGCTGGGGCTGGAGTTTAAAGCGGGCCTGTTGCCGGAAGATAAAGTCAAAGCGGTGACCGAGCTGAATCAACATGCGCCGCTGGCGATGGTCGGTGACGGTATTAACGACGCGCCAGCGATGAAAGCTGCCGCCATCGGGATTGCAATGGGTAGCGGCACAGACGTGGCGCTGGAAACCGCCGACGCAGCATTAACCCATAACCACCTGCGCGGCCTGGTGCAAATGATTGAACTGGCACGCGCCACTCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACAGCGAATGCGTTAAGATTGTTGCGCAGGAGATAA", 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"MSTPDNHGKKAPQFAAFKPLTTVQNANDCCCDGACSSTPTLSENVSGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDEQAAEEPQASRLKENLPLITLIVMMAISWGLEQFNHPFGQLAFIATTLVGLYPIARQALRLIKSGSYFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARQGVSALMALKPETATRLRKGEREEVAINSLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGESIPVERATGDKVPAGATSVDRLVTLEVLSEPGASAIDRILKLIEEAEERRAPIERFIDRFSRIYTPAIMAVALLVTLVPPLLFAASWQEWIYKGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTQVAFDKTGTLTVGKPRVTAIHPATGISESELLTLAAAVEQGATHPLAQAIVREAQVAELAIPTAESQRALVGSGIEAQVNGERVLICAAGKHPADAFTGLINELESAGQTVVLVVRNDDVLGVIALQDTLRADAATAISELNALGVKGVILTGDNPRAAAAIAGELGLEFKAGLLPEDKVKAVTELNQHAPLAMVGDGINDAPAMKAAAIGIAMGSGTDVALETADAALTHNHLRGLVQMIELARATHANIRQNITIALGLKGIFLVTTLLGMTGLWLAVLADTGATVLVTANALRLLRRR", - "protein_translation_length": 732, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "sirA" - ], - [ - "gene_synonym", - "NP_417927.1" - ], - [ - "gene_synonym", - "GeneID:947974" - ], - [ - "gene_synonym", - "GI:16131342" - ], - [ - "gene_synonym", - "b3470" - ], - [ - "gene_synonym", - "ECK3454" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A890" - ], - [ - "gene_synonym", - "JW3435" - ], - [ - "gene_synonym", - "yhhP" - ], - [ - "gene_synonym", - "tusA" - ], - [ - "gene_synonym", - "ASAP:ABE-0011336" - ], - [ - "gene_synonym", - "EcoGene:EG12216" - ] - ], - "dna_sequence": "ATGACCGATCTCTTTTCCAGCCCTGACCACACACTCGACGCGCTTGGCCTGCGCTGCCCGGAACCGGTGATGATGGTGCGCAAAACCGTGCGCAATATGCAGCCTGGCGAAACGTTGCTGATTATCGCCGACGATCCGGCCACTACCCGCGATATTCCTGGGTTTTGTACCTTTATGGAACACGAACTGGTTGCTAAAGAGACGGATGGACTGCCTTATCGTTATTTGATTCGTAAAGGCGGTTGA", - "dna_sequence_length": 246, - "functions": [ - "mnm(5)-s(2)U34-tRNA 2-thiolation sulfurtransferase" - ], - "id": "CDS_3406", - "location": [ - [ - "NC_000913", - 3608996, - "-", - 246 - ] - ], - "md5": "224df1f627c6f2345b61fd5b299e7875", - "parent_gene": "", - "protein_md5": "5a422db384aafff6e9de57f0759b81fb", - "protein_translation": "MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG", - "protein_translation_length": 81, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947984" - ], - [ - "gene_synonym", - "yhhQ" - ], - [ - "gene_synonym", - "GI:16131343" - ], - [ - "gene_synonym", - "ASAP:ABE-0011340" - ], - [ - "gene_synonym", - "NP_417928.1" - ], - [ - "gene_synonym", - "ECK3455" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37619" - ], - [ - "gene_synonym", - "EcoGene:EG12217" - ], - [ - "gene_synonym", - "JW3436" - ], - [ - "gene_synonym", - "b3471" - ] - ], - "dna_sequence": "ATGAACGTTTTCTCGCAAACTCAACGCTATAAGGCGTTGTTCTGGTTATCGTTATTTCATCTGCTGGTGATCACCTCCAGTAACTATCTGGTTCAGCTTCCCGTCTCCATTTTGGGTTTCCATACCACCTGGGGCGCGTTTAGCTTTCCGTTTATTTTTCTTGCTACCGACCTGACCGTGCGTATTTTTGGCGCACCGCTGGCCCGACGCATTATCTTCGCGGTAATGATCCCTGCGTTATTAATCTCCTACGTCATCTCGTCGCTATTCTATATGGGTTCCTGGCAGGGATTCGGCGCACTCGCCCACTTCAACCTGTTTGTCGCCCGTATCGCCACCGCCAGTTTCATGGCCTACGCGCTGGGGCAAATCCTCGACGTGCACGTTTTTAACCGCCTGCGTCAGAGTCGCCGCTGGTGGCTGGCACCGACAGCGTCCACACTGTTCGGTAACGTCAGCGACACGCTGGCCTTTTTCTTCATTGCCTTCTGGCGTAGCCCGGATGCCTTTATGGCTGAACACTGGATGGAAATCGCGCTGGTCGATTACTGTTTCAAAGTGTTAATCAGTATCGTTTTCTTCCTGCCAATGTATGGCGTATTACTCAATATGCTGTTGAAAAGACTGGCAGATAAATCCGAAATCAACGCTTTGCAGGCGAGTTAA", - "dna_sequence_length": 666, - "functions": [ - "DUF165 family inner membrane protein" - ], - "id": "CDS_3407", - "location": [ - [ - "NC_000913", - 3609217, - "+", - 666 - ] - ], - "md5": "b54047159a53072a81c7d0d62ecb4fcd", - "parent_gene": "", - "protein_md5": "1b834039054126a30266a06018e5a481", - "protein_translation": "MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSILGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALAHFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFFIAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINALQAS", - "protein_translation_length": 221, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111595" - ], - [ - "gene_synonym", - "EcoGene:EG12218" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEE1" - ], - [ - "gene_synonym", - "ECK3456" - ], - [ - "gene_synonym", - "NP_417929.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0011342" - ], - [ - "gene_synonym", - "JW5682" - ], - [ - "gene_synonym", - "GeneID:947983" - ], - [ - "gene_synonym", - "b3472" - ], - [ - "gene_synonym", - "dcrB" - ], - [ - "gene_synonym", - "yhhR" - ] - ], - "dna_sequence": "ATGCGCAATCTGGTTAAATATGTCGGAATTGGCCTGCTGGTTATGGGGCTTGCGGCCTGTGATGATAAAGACACTAACGCTACGGCGCAGGGTTCGGTCGCGGAAAGTAACGCTACCGGGAATCCCGTCAACCTGCTTGATGGCAAGTTAAGTTTCTCGCTGCCAGCGGATATGACCGACCAGAGCGGTAAGCTGGGAACGCAGGCCAATAACATGCATGTCTGGTCCGACGCCACCGGGCAGAAAGCAGTCATCGTCATCATGGGCGATGATCCGAAAGAAGATCTGGCGGTGCTGGCGAAGCGTCTGGAAGATCAGCAACGTAGCCGCGATCCGCAGCTGCAAGTGGTAACCAATAAAGCCATTGAGCTGAAAGGTCACAAAATGCAGCAGTTAGACAGTATTATCTCCGCGAAAGGCCAGACGGCGTACTCTTCCGTTATTCTGGGTAACGTGGGTAATCAACTGCTGACCATGCAAATTACGCTGCCCGCTGACGATCAGCAAAAAGCGCAGACCACCGCAGAAAACATCATTAATACGCTGGTTATTCAGTAA", - "dna_sequence_length": 558, - "functions": [ - "putative lipoprotein" - ], - "id": "CDS_3408", - "location": [ - [ - "NC_000913", - 3609955, - "+", - 558 - ] - ], - "md5": "d57a7cabb18a2fd74fc6e0da98f658f6", - "parent_gene": "", - "protein_md5": "2177f81e6b305ed683dc7fe8a2b8e1d5", - "protein_translation": "MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAESNATGNPVNLLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKRLEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQITLPADDQQKAQTTAENIINTLVIQ", - "protein_translation_length": 185, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37621" - ], - [ - "gene_synonym", - "ASAP:ABE-0011344" - ], - [ - "gene_synonym", - "ECK3457" - ], - [ - "gene_synonym", - "NP_417930.2" - ], - [ - "gene_synonym", - "GeneID:947982" - ], - [ - "gene_synonym", - "GI:90111596" - ], - [ - "gene_synonym", - "b3473" - ], - [ - "gene_synonym", - "JW5945" - ], - [ - "gene_synonym", - "EcoGene:EG12219" - ], - [ - "gene_synonym", - "yhhS" - ] - ], - "dna_sequence": "ATGCCCGAACCCGTAGCCGAACCCGCGCTAAACGGATTGCGCCTGAATTTGCGCATTGTCTCTATAGTCATGTTTAACTTCGCCAGCTACCTCACCATCGGGTTGCCGCTCGCTGTATTACCGGGCTATGTCCATGATGTGATGGGCTTTAGCGCCTTCTGGGCAGGATTGGTTATCAGCCTGCAATATTTCGCCACCTTGCTGAGCCGCCCTCATGCCGGACGTTACGCCGATTCGCTGGGACCCAAAAAGATTGTCGTCTTCGGTTTATGCGGCTGCTTTTTGAGCGGTCTGGGGTATCTGACGGCAGGATTAACCGCCAGTCTGCCTGTCATCAGCCTGTTATTACTTTGCCTGGGGCGCGTCATCCTTGGGATTGGGCAAAGTTTTGCCGGAACGGGATCGACCCTATGGGGCGTTGGCGTGGTTGGCTCGCTGCATATCGGGCGGGTGATTTCGTGGAACGGCATTGTCACTTACGGGGCGATGGCGATGGGTGCGCCGTTAGGCGTCGTGTTTTATCACTGGGGCGGCTTGCAGGCGTTAGCGTTAATCATTATGGGCGTGGCGCTGGTGGCCATTTTGTTGGCGATCCCGCGTCCGACGGTAAAAGCCAGTAAAGGCAAACCGCTGCCGTTTCGCGCGGTGCTTGGGCGCGTCTGGCTGTACGGTATGGCGCTGGCACTGGCTTCCGCCGGATTTGGCGTCATCGCCACCTTTATCACGCTGTTTTATGACGCTAAAGGTTGGGACGGTGCGGCTTTCGCGCTGACGCTGTTTAGCTGTGCGTTTGTCGGTACGCGTTTGTTATTCCCTAACGGCATTAACCGTATCGGTGGCTTAAACGTAGCGATGATTTGCTTTAGCGTTGAGATAATCGGCCTGCTACTGGTTGGCGTGGCGACTATGCCGTGGATGGCGAAAATCGGCGTCTTACTGGCGGGGGCCGGGTTTTCGCTGGTGTTCCCGGCATTGGGTGTAGTGGCGGTAAAAGCGGTTCCGCAGCAAAATCAGGGGGCGGCGCTGGCAACTTACACCGTATTTATGGATTTATCGCTTGGCGTGACTGGACCACTGGCTGGGCTGGTGATGAGCTGGGCGGGCGTACCGGTGATTTATCTGGCGGCGGCGGGACTGGTCGCAATCGCGTTATTACTGACGTGGCGATTAAAAAAACGGCCTCCGGAACACGTCCCTGAGGCCGCCTCATCATCTTAA", - "dna_sequence_length": 1218, - "functions": [ - "putative arabinose efflux transporter" - ], - "id": "CDS_3409", - "location": [ - [ - "NC_000913", - 3611733, - "-", - 1218 - ] - ], - "md5": "ee1491cce203a813d27697835efeb990", - "parent_gene": "", - "protein_md5": "0175a85ab238152866d13e1086a5a17d", - "protein_translation": "MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDVMGFSAFWAGLVISLQYFATLLSRPHAGRYADSLGPKKIVVFGLCGCFLSGLGYLTAGLTASLPVISLLLLCLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTYGAMAMGAPLGVVFYHWGGLQALALIIMGVALVAILLAIPRPTVKASKGKPLPFRAVLGRVWLYGMALALASAGFGVIATFITLFYDAKGWDGAAFALTLFSCAFVGTRLLFPNGINRIGGLNVAMICFSVEIIGLLLVGVATMPWMAKIGVLLAGAGFSLVFPALGVVAVKAVPQQNQGAALATYTVFMDLSLGVTGPLAGLVMSWAGVPVIYLAAAGLVAIALLLTWRLKKRPPEHVPEAASSS", - "protein_translation_length": 405, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947980" - ], - [ - "gene_synonym", - "ECK3458" - ], - [ - "gene_synonym", - "NP_417931.4" - ], - [ - "gene_synonym", - "b3474" - ], - [ - "gene_synonym", - "ASAP:ABE-0011347" - ], - [ - "gene_synonym", - "JW5680" - ], - [ - "gene_synonym", - "GI:90111597" - ], - [ - "gene_synonym", - "yhhT" - ], - [ - "gene_synonym", - "EcoGene:EG12220" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGM0" - ] - ], - "dna_sequence": "ATGGAAACCCCTCAACCCGATAAAACGGGCATGCACATTCTGCTCAAGCTGGCCTCGCTGGTAGTGATCCTCGCGGGCATTCACGCAGCGGCAGATATCATTGTGCAGCTGTTACTGGCGCTGTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTAGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTATGCTGCCGAAGTTTAATAAGGAGCTGACGCGCAAACTTTTTAAATTGCAGGAGATGTTGCCTTTTCTTAATTTGCATATGTCGCCGGAGCGAATGCTGCAGCGGATGGACTCGGAAAAAGTGGTTACCTTCACCACAGCGCTAATGACCGGGCTTTCCGGGGCAATGGCGAGCGTGCTTTTGCTGGTGATGACCGTAGTTTTTATGCTGTTTGAAGTGCGCCACGTCCCTTACAAAATGCGTTTTGCGCTGAATAATCCACAGATTCACATCGCGGGATTACACCGCGCACTTAAAGGCGTTTCGCACTATCTTGCATTGAAGACGCTACTCAGTTTATGGACAGGTGTCATCGTCTGGCTGGGGCTGGAGCTGATGGGGGTGCAGTTTGCGCTGATGTGGGCAGTACTGGCGTTTTTGCTCAACTACGTGCCCAATATCGGCGCGGTAATTTCCGCCGTACCGCCAATGATTCAGGTGCTGCTGTTTAATGGTGTTTACGAATGTATTCTGGTCGGCGCATTGTTTTTAGTGGTCCATATGGTCATCGGCAATATTTTAGAACCACGGATGATGGGCCATCGCCTGGGGATGTCCACCATGGTGGTATTTCTTTCATTGTTAATTTGGGGATGGCTGCTCGGCCCGGTAGGGATGCTACTTTCGGTGCCATTAACCAGCGTGTGTAAAATCTGGATGGAAACCACCAAAGGCGGTAGCAAACTGGCGATTTTACTGGGGCCGGGCAGACCGAAAAGTCGGTTACCGGGATGA", - "dna_sequence_length": 1050, - "functions": [ - "UPF0118 family putative transporter" - ], - "id": "CDS_3410", - "location": [ - [ - "NC_000913", - 3611865, - "+", - 1050 - ] - ], - "md5": "42b9bf9ab5a5eec020d8dfa6a127896b", - "parent_gene": "", - "protein_md5": "8331c8df7ca3a6355b182e261c86154c", - "protein_translation": "METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG", - "protein_translation_length": 349, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "acpT" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37623" - ], - [ - "gene_synonym", - "ECK3459" - ], - [ - "gene_synonym", - "GeneID:947979" - ], - [ - "gene_synonym", - "JW3440" - ], - [ - "gene_synonym", - "EcoGene:EG12221" - ], - [ - "gene_synonym", - "ASAP:ABE-0011351" - ], - [ - "gene_synonym", - "yhhU" - ], - [ - "gene_synonym", - "GI:16131347" - ], - [ - "gene_synonym", - "b3475" - ], - [ - "gene_synonym", - "NP_417932.1" - ] - ], - "dna_sequence": "ATGTATCGGATAGTTCTGGGGAAAGTTTCGACCTTAAGCGCAGCTCCACTGCCACCGGGTTTACGCGAGCAAGCACCGCAAGGTCCACGACGCGAACGCTGGCTGGCGGGGCGTGCATTGCTTTCGCACACGCTTTCCCCGCTACCGGAGATCATCTATGGCGAACAAGGCAAACCTGCATTTGCGCCGGAAATGCCGCTATGGTTCAACTTAAGCCATAGCGGTGACGATATCGCCCTGCTGTTGAGTGATGAAGGCGAAGTCGGCTGCGATATCGAAGTGATTCGCCCGCGCGCCAACTGGCGCTGGCTGGCGAACGCCGTATTCAGCCTCGGGGAACACGCTGAGATGGACGCCGTGCATCCTGATCAGCAACTGGAAATGTTCTGGCGCATCTGGACGCGCAAAGAAGCCATCGTTAAACAGCGTGGCGGCAGCGCCTGGCAAATCGTCAGCGTAGACAGCACCTATCACTCCTCGCTGTCAGTCAGCCATTGTCAGCTTGAAAATTTAAGCCTTGCGATCTGCACCCCTACTCCCTTTACGCTCACCGCCGACAGTGTGCAATGGATCGATTCAGTTAACTGA", - "dna_sequence_length": 588, - "functions": [ - "4'-phosphopantetheinyl transferase" - ], - "id": "CDS_3411", - "location": [ - [ - "NC_000913", - 3612969, - "+", - 588 - ] - ], - "md5": "053550baf0c52dadf86d84a853cb6641", - "parent_gene": "", - "protein_md5": "bf988953eba496afa2b4fe4ebd3ae75c", - "protein_translation": "MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHTLSPLPEIIYGEQGKPAFAPEMPLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWRWLANAVFSLGEHAEMDAVHPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSSLSVSHCQLENLSLAICTPTPFTLTADSVQWIDSVN", - "protein_translation_length": 195, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131348" - ], - [ - "gene_synonym", - "EcoGene:EG12075" - ], - [ - "gene_synonym", - "nikA" - ], - [ - "gene_synonym", - "JW3441" - ], - [ - "gene_synonym", - "NP_417933.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011354" - ], - [ - "gene_synonym", - "b3476" - ], - [ - "gene_synonym", - "hydC" - ], - [ - "gene_synonym", - "ECK3460" - ], - [ - "gene_synonym", - "hydD" - ], - [ - "gene_synonym", - "GeneID:947981" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33590" - ] - ], - "dna_sequence": "ATGCTCTCCACACTCCGCCGCACTCTATTTGCGCTGCTGGCTTGTGCGTCTTTTATCGTCCATGCCGCTGCACCAGATGAAATCACCACCGCCTGGCCGGTGAATGTCGGGCCACTAAACCCGCACCTTTACACGCCTAACCAGATGTTCGCCCAGAGCATGGTTTATGAACCATTGGTGAAATATCAGGCAGACGGTTCGGTGATCCCGTGGCTGGCAAAAAGCTGGACTCATTCAGAAGATGGTAAAACCTGGACCTTCACCCTGCGTGATGACGTGAAATTCTCCAACGGTGAACCGTTCGATGCCGAGGCGGCGGCAGAAAACTTCCGCGCAGTGCTCGATAACCGTCAACGTCACGCCTGGCTGGAGCTGGCAAACCAGATTGTTGATGTTAAAGCACTCAGTAAAACAGAGCTGCAAATTACCCTGAAAAGCGCCTACTATCCTTTCCTGCAAGAACTGGCCCTGCCCCGTCCTTTCCGTTTTATCGCTCCCTCGCAGTTTAAAAACCATGAAACCATGAACGGAATTAAAGCGCCGATTGGCACCGGACCGTGGATTTTGCAGGAATCGAAACTGAATCAGTACGATGTCTTCGTCCGTAACGAAAACTACTGGGGCGAAAAGCCAGCGATTAAAAAGATCACCTTTAACGTCATCCCGGACCCGACTACCCGCGCGGTGGCGTTTGAAACTGGCGATATCGACCTGCTGTACGGAAACGAAGGGTTATTACCGCTCGATACCTTCGCCCGCTTTAGCCAGAATCCGGCTTACCACACCCAACTGTCACAGCCGATCGAAACCGTGATGCTGGCGCTCAATACCGCCAAAGCCCCCACCAACGAGCTGGCAGTACGTGAAGCTCTTAATTACGCGGTAAACAAAAAATCGCTGATTGATAACGCGTTGTATGGCACCCAGCAGGTCGCCGACACCCTGTTTGCCCCTTCTGTGCCCTACGCCAACCTCGGCCTGAAACCGAGCCAGTACGATCCGCAAAAAGCGAAAGCGTTGCTGGAAAAAGCCGGTTGGACGCTGCCTGCGGGCAAAGACATCCGCGAGAAAAATGGTCAGCCGCTGCGCATTGAACTTTCGTTCATCGGCACCGATGCGTTAAGCAAATCGATGGCGGAAATCATTCAGGCTGATATGCGCCAGATTGGCGCAGATGTCTCGCTGATTGGCGAAGAAGAGAGCAGTATCTATGCTCGTCAGCGCGACGGTCGTTTTGGCATGATTTTCCACCGCACCTGGGGCGCGCCATATGATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCGACCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAATGATGGTGGTATCAAAACCGGAGCTGGGTAACATCCCCTACGCGCCGATCGCCACCGAAATTCCGTTCGAACAGATTAAACCGGTGAAACCTTAA", - "dna_sequence_length": 1575, - "functions": [ - "nickel/heme ABC transporter periplasmic binding protein" - ], - "id": "CDS_3412", - "location": [ - [ - "NC_000913", - 3613667, - "+", - 1575 - ] - ], - "md5": "60ea2c028caf05dee5ced30be1a127d2", - "parent_gene": "", - "protein_md5": "b46dc9d776715839552090d863e67590", - "protein_translation": "MLSTLRRTLFALLACASFIVHAAAPDEITTAWPVNVGPLNPHLYTPNQMFAQSMVYEPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKFSNGEPFDAEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRPFRFIAPSQFKNHETMNGIKAPIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITFNVIPDPTTRAVAFETGDIDLLYGNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALNTAKAPTNELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPSQYDPQKAKALLEKAGWTLPAGKDIREKNGQPLRIELSFIGTDALSKSMAEIIQADMRQIGADVSLIGEEESSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLADKPLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYAPIATEIPFEQIKPVKP", - "protein_translation_length": 524, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "nikB" - ], - [ - "gene_synonym", - "GI:16131349" - ], - [ - "gene_synonym", - "ECK3461" - ], - [ - "gene_synonym", - "JW3442" - ], - [ - "gene_synonym", - "GeneID:947986" - ], - [ - "gene_synonym", - "NP_417934.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011356" - ], - [ - "gene_synonym", - "b3477" - ], - [ - "gene_synonym", - "EcoGene:EG12076" - ], - [ - "gene_synonym", - "hydC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33591" - ], - [ - "gene_synonym", - "hydD" - ] - ], - "dna_sequence": "ATGTTGCGTTACGTATTACGCCGCTTTCTGCTGCTGATCCCGATGGTGCTCGCCGCCTCGGTGATCATTTTTCTGATGCTGCGCCTCGGTACCGGCGACCCGGCGCTCGATTATTTGCGTCTGTCTAACCTGCCGCCGACGCCGGAGATGCTGGCCTCTACCCGCACCATGCTGGGACTGGATCAGCCGCTGTACGTCCAGTACGGCACCTGGTTGTGGAAGGCGCTGCATCTTGACTTTGGTATCTCATTCGCCAGCCAACGCCCGGTACTGGACGATATGCTGAACTTCCTGCCCGCCACGCTGGAACTTGCAGGTGCGGCGCTGGTATTAATTCTGCTCACTTCCGTACCGCTCGGTATCTGGGCGGCGCGCCATCGCGACCGTCTGCCGGATTTCGCCGTACGTTTCATCGCGTTTCTTGGCGTGTCGATGCCTAACTTCTGGCTGGCGTTTTTACTGGTGATGGCGTTTTCGGTGTATCTGCAATGGCTACCCGCGATGGGTTACGGCGGCTGGCAGCACATCATTTTGCCTGCGGTTTCCATTGCCTTTATGTCGCTGGCGATTAACGCGCGTTTACTGCGCGCCAGTATGCTGGACGTCGCCGGTCAGCGTCACGTCACCTGGGCGCGTCTGCGCGGCCTGAACGACAAACAGACCGAACGTCGCCACATCCTGCGCAATGCCTCGCTGCCGATGATCACCGCCGTGGGGATGCATATCGGCGAACTGATTGGCGGGACGATGATTATCGAAAACATCTTTGCCTGGCCGGGCGTCGGGCGCTATGCGGTGTCGGCGATTTTTAACCGTGACTATCCGGTGATCCAGTGCTTTACGCTGATGATGGTGGTGGTTTTTGTGGTCTGTAATTTGATTGTCGATTTGCTCAACGCCGCGCTGGACCCGCGCATTCGTCGTCATGAAGGAGCGCACGCGTGA", - "dna_sequence_length": 945, - "functions": [ - "nickel ABC transporter permease" - ], - "id": "CDS_3413", - "location": [ - [ - "NC_000913", - 3615241, - "+", - 945 - ] - ], - "md5": "9567141b38c288924dd0bebd57dc0498", - "parent_gene": "", - "protein_md5": "35e173d071fe7b3a1f9fcc71f85b73bd", - "protein_translation": "MLRYVLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNLPPTPEMLASTRTMLGLDQPLYVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATLELAGAALVLILLTSVPLGIWAARHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSVYLQWLPAMGYGGWQHIILPAVSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLNDKQTERRHILRNASLPMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPVIQCFTLMMVVVFVVCNLIVDLLNAALDPRIRRHEGAHA", - "protein_translation_length": 314, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "nikC" - ], - [ - "gene_synonym", - "ASAP:ABE-0011358" - ], - [ - "gene_synonym", - "JW3443" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFA9" - ], - [ - "gene_synonym", - "ECK3462" - ], - [ - "gene_synonym", - "GI:16131350" - ], - [ - "gene_synonym", - "NP_417935.1" - ], - [ - "gene_synonym", - "EcoGene:EG12077" - ], - [ - "gene_synonym", - "hydC" - ], - [ - "gene_synonym", - "hydD" - ], - [ - "gene_synonym", - "GeneID:947990" - ], - [ - "gene_synonym", - "b3478" - ] - ], - "dna_sequence": "GTGAACTTTTTCCTCTCTTCCCGCTGGTCGGTACGCCTGGCGCTGATCATTATCGCCCTGCTGGCGCTGATTGCGCTCACCAGCCAGTGGTGGCTGCCGTATGACCCACAGGCGATTGATTTGCCGTCGCGCCTGCTTTCGCCGGATGCGCAGCACTGGCTGGGCACCGATCACTTAGGTCGCGATATTTTCTCGCGGCTGATGGCAGCGACCCGCGTGTCGCTCGGTTCGGTAATGGCCTGCCTGCTGCTGGTGCTGACATTAGGGCTGGTTATTGGCGGCAGCGCCGGGTTGATTGGCGGGCGCGTTGATCAGGCCACCATGCGCGTCGCCGATATGTTTATGACCTTCCCGACCTCGATTCTGTCGTTCTTTATGGTTGGCGTGCTCGGCACCGGGCTGACCAACGTAATTATCGCCATCGCCCTGTCGCACTGGGCGTGGTATGCACGCATGGTGCGCAGCCTGGTGATTTCACTACGCCAACGCGAGTTTGTGCTGGCGTCACGGCTTTCCGGTGCGGGCCATGTGCGGGTGTTTGTCGATCATCTGGCAGGCGCGGTGATCCCTTCGCTGCTGGTGCTGGCAACGCTGGATATCGGCCATATGATGCTGCACGTCGCGGGGATGTCTTTCCTTGGCCTCGGTGTGACCGCGCCGACCGCCGAATGGGGCGTGATGATTAACGACGCGCGCCAGTATATCTGGACCCAGCCGCTGCAAATGTTCTGGCCGGGGCTGGCGCTGTTTATCAGCGTGATGGCCTTTAACCTGGTGGGTGACGCACTGCGCGATCATCTGGACCCTCATCTGGTGACGGAGCACGCACACTAA", - "dna_sequence_length": 834, - "functions": [ - "nickel ABC transporter permease" - ], - "id": "CDS_3414", - "location": [ - [ - "NC_000913", - 3616182, - "+", - 834 - ] - ], - "md5": "6f6d4e61e730699aae4cfff2fcf5e3e5", - "parent_gene": "", - "protein_md5": "a83ef7fa5029f22dd900045c96542cdd", - "protein_translation": "MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSRLLSPDAQHWLGTDHLGRDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGRVDQATMRVADMFMTFPTSILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVFVDHLAGAVIPSLLVLATLDIGHMMLHVAGMSFLGLGVTAPTAEWGVMINDARQYIWTQPLQMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHAH", - "protein_translation_length": 277, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3463" - ], - [ - "gene_synonym", - "JW3444" - ], - [ - "gene_synonym", - "nikD" - ], - [ - "gene_synonym", - "ASAP:ABE-0011360" - ], - [ - "gene_synonym", - "GeneID:947989" - ], - [ - "gene_synonym", - "GI:16131351" - ], - [ - "gene_synonym", - "hydC" - ], - [ - "gene_synonym", - "hydD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33593" - ], - [ - "gene_synonym", - "NP_417936.1" - ], - [ - "gene_synonym", - "b3479" - ], - [ - "gene_synonym", - "EcoGene:EG12078" - ] - ], - "dna_sequence": "ATGCCGCAACAGATTGAACTACGTAATATCGCGCTACAGGCCGCGCAGCCGCTGGTACACGGTGTATCGTTAACCCTGCAACGCGGGCGCGTGCTGGCGTTAGTCGGCGGTAGCGGCAGCGGGAAATCATTAACCTGCGCCGCAACGCTGGGCATTTTGCCCGCTGGCGTTCGCCAGACGGCGGGGGAAATTTTAGCCGATGGCAAACCGGTTTCGCCTTGCGCCCTGCGCGGCATCAAAATTGCCACCATCATGCAGAACCCGCGCAGCGCCTTTAATCCACTGCACACCATGCACACCCACGCGCGGGAAACCTGCCTGGCGTTAGGGAAACCCGCCGATGACGCTACGCTTACCGCTGCCATAGAAGCGGTGGGGCTGGAAAACGCCGCGCGCGTGCTGAAGCTGTACCCGTTCGAGATGAGCGGCGGCATGTTGCAGCGCATGATGATTGCGATGGCGGTGCTGTGTGAATCACCGTTTATCATCGCCGATGAACCGACCACCGACCTTGACGTGGTAGCACAGGCGCGCATCCTCGATCTGCTGGAAAGCATTATGCAAAAACAAGCGCCGGGAATGCTGCTGGTGACCCATGATATGGGCGTTGTGGCGCGTCTGGCGGATGACGTGGCGGTGATGTCTGACGGTAAGATTGTCGAACAGGGCGATGTAGAAACGCTGTTTAACGCCCCCAAACATACAGTGACGCGCAGCCTGGTTTCCGCTCATCTCGCCCTCTACGGTATGGAGCTGGCATCATGA", - "dna_sequence_length": 765, - "functions": [ - "nickel ABC transporter ATPase" - ], - "id": "CDS_3415", - "location": [ - [ - "NC_000913", - 3617015, - "+", - 765 - ] - ], - "md5": "9ac607ed72bc8c80afb44920f743ed3b", - "parent_gene": "", - "protein_md5": "de7db2d0f9ab1a946d51bc7ec8d5ac64", - "protein_translation": "MPQQIELRNIALQAAQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPAGVRQTAGEILADGKPVSPCALRGIKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSDGKIVEQGDVETLFNAPKHTVTRSLVSAHLALYGMELAS", - "protein_translation_length": 254, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947987" - ], - [ - "gene_synonym", - "JW3445" - ], - [ - "gene_synonym", - "ASAP:ABE-0011362" - ], - [ - "gene_synonym", - "ECK3464" - ], - [ - "gene_synonym", - "GI:16131352" - ], - [ - "gene_synonym", - "EcoGene:EG12079" - ], - [ - "gene_synonym", - "nikE" - ], - [ - "gene_synonym", - "NP_417937.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33594" - ], - [ - "gene_synonym", - "hydC" - ], - [ - "gene_synonym", - "hydD" - ], - [ - "gene_synonym", - "b3480" - ] - ], - "dna_sequence": "ATGACTTTACTTAACATCTCCGGCCTTTCCCATCACTATGCGCACGGTGGATTTAACGGAAAACATCAACATCAGGCGGTGCTGAATAACGTTTCCCTGACCCTGAAAAGCGGCGAAACCGTCGCCCTGCTGGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGGCGCGCGCCAGCGAAATGCTGAAGGCGGTCGATCTCGATGACAGCGTTCTCGACAAACGCCCACCGCAGTTAAGCGGCGGCCAGCTCCAGCGCGTCTGCCTGGCTCGCGCGCTGGCGGTCGAACCGAAACTACTGATTCTGGATGAAGCCGTTTCTAACCTTGATCTCGTGTTACAGGCGGGTGTCATTCGCCTGCTGAAAAAGCTACAACAACAGTTTGGCACCGCCTGCCTGTTCATCACCCACGACTTACGCCTGGTAGAACGCTTTTGCCAGCGGGTAATGGTTATGGACAACGGACAAATCGTCGAAACCCAGGTGGTGGGAGAGAAATTAACCTTTTCCTCTGACGCCGGACGTGTGCTACAAAACGCGGTATTACCCGCATTCCCCGTGCGCCGTCGCACCACAGAAAAGGTTTAA", - "dna_sequence_length": 807, - "functions": [ - "nickel ABC transporter ATPase" - ], - "id": "CDS_3416", - "location": [ - [ - "NC_000913", - 3617776, - "+", - 807 - ] - ], - "md5": "76ce30475e96e4e611a3a662600ed543", - "parent_gene": "", - "protein_md5": "757c84b5cc916734d4a91092224de0ca", - "protein_translation": "MTLLNISGLSHHYAHGGFNGKHQHQAVLNNVSLTLKSGETVALLGRSGCGKSTLARLLVGLESPAQGNISWRGEPLAKLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREILREPMRHLLSLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQVVGEKLTFSSDAGRVLQNAVLPAFPVRRRTTEKV", - "protein_translation_length": 268, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3446" - ], - [ - "gene_synonym", - "yhhG" - ], - [ - "gene_synonym", - "GeneID:947995" - ], - [ - "gene_synonym", - "ECK3465" - ], - [ - "gene_synonym", - "ASAP:ABE-0011366" - ], - [ - "gene_synonym", - "GI:16131353" - ], - [ - "gene_synonym", - "nikR" - ], - [ - "gene_synonym", - "EcoGene:EG11519" - ], - [ - "gene_synonym", - "NP_417938.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6Z6" - ], - [ - "gene_synonym", - "b3481" - ] - ], - "dna_sequence": "ATGCAACGAGTCACCATCACGCTTGATGACGATTTACTGGAGACGCTGGACAGCCTGAGCCAGCGTCGTGGTTATAACAACCGTTCCGAAGCTATCCGCGACATTCTGCGTAGCGCCCTGGCGCAAGAGGCCACCCAGCAGCACGGCACGCAAGGTTTCGCGGTGCTGTCGTATGTGTATGAACACGAAAAACGCGACTTAGCCAGCCGCATTGTCTCCACCCAGCATCATCACCACGACCTCTCCGTCGCCACGCTGCATGTGCACATCAACCACGACGACTGTCTGGAAATCGCCGTGTTGAAAGGTGACATGGGTGACGTGCAGCATTTTGCCGATGACGTTATCGCCCAGCGCGGCGTGCGGCACGGGCATTTGCAGTGCTTGCCGAAGGAAGATTGA", - "dna_sequence_length": 402, - "functions": [ - "transcriptional repressor, Ni-binding" - ], - "id": "CDS_3417", - "location": [ - [ - "NC_000913", - 3618588, - "+", - 402 - ] - ], - "md5": "574d5c784aa00ce013ee9bc26529e69a", - "parent_gene": "", - "protein_md5": "6d977bb96b25187abc5348661bf9f009", - "protein_translation": "MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED", - "protein_translation_length": 133, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947994" - ], - [ - "gene_synonym", - "ECK3466" - ], - [ - "gene_synonym", - "YP_026224.1" - ], - [ - "gene_synonym", - "EcoGene:EG10847" - ], - [ - "gene_synonym", - "JW5679" - ], - [ - "gene_synonym", - "GI:49176361" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16917" - ], - [ - "gene_synonym", - "b3482" - ], - [ - "gene_synonym", - "rhsB" - ], - [ - "gene_synonym", - "ASAP:ABE-0011371" - ] - ], - "dna_sequence": "ATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCACCTGTTTCCCGGTGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCACCATCACCGACAGCCTGGACCGCCGTGAAGTGCTGCACACGCAGGGCGAAGCCGGGCTGAAGCGGGTGGTGAAAAAGGAACACGCGGACGGCAGCGTCACGCAGAGTCAGTTTGACGCCGTGGGCAGGCTCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCAGATGACGGCGGTGCACCGCGAGGAAGGGCTGAGTCAGTACCGCGCATACGACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGAACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACGATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTGTATGGATATCAATTGAATCCGATATCAGACATCGACCCCCTGGGTTTATCTATGTGGGAGGATGCAAAATCGGGGGCATGTACTAATGGTCTTTGCGGCACACTATCCGCTATGATAGGTCCAGATAAATTTGATTCTATAGATAGCACCGCATATGACGCCTTAAATAAAATAAATAGCCAATCTATTTGCGAAGATAAAGAGTTCGCTGGTTTAATATGTAAGGATAATAGTGGCAGATATTTCTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATACTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCAAGTCATTTTATTTAGGTACGCCCAGTGGTAATTTTAAAGCAATAGATAACCACGGGAAGGAAATAACAAACAGAAAAGGATTACCTAATGTCTGCAGAGTTCATGGTAATATGTAA", - "dna_sequence_length": 4236, - "functions": [ - "Rhs protein with DUF4329 family putative toxin domain", - "putative neighboring cell growth inhibitor" - ], - "id": "CDS_3418", - "location": [ - [ - "NC_000913", - 3619192, - "+", - 4236 - ] - ], - "md5": "e9bf47a72d6bf7468527eb17166648c0", - "parent_gene": "", - "protein_md5": "bb5349775b7aec8e396cc1219579c09f", - "protein_translation": "MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNPLLGAKVLPGETDIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDGAWRHFRLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRGELAVVYDRSGKQVRSFTYDDKYRGRMVAHRHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLDRREVLHTQGEAGLKRVVKKEHADGSVTQSQFDAVGRLRAQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFYYNHHNQLTSATGPDGLELRREYDELGRLIQETAPDGDITRYRYDNPHSDLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQMTAVHREEGLSQYRAYDSRGQLIAVKDTQGHETRYEYNIAGDLTAVIAPDGSRNGTQYDAWGKAVRTTQGGLTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVKGETAERWQYDERGWLTDISHISEGHRVAVHYRYDEKGRLTGERQTVHHPQTEALLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGYLAGMKLGDTPLVEYTRDRLHRETLRSFGRYELTTAYTPAGQLQSQHLNSLLSDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIPYATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYEEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRSRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNLYGYQLNPISDIDPLGLSMWEDAKSGACTNGLCGTLSAMIGPDKFDSIDSTAYDALNKINSQSICEDKEFAGLICKDNSGRYFSTAPNRGERKGSYPFNSPCPNGTEKVSAYHTHGADSHGEYWDEIFSGKDEKIVKSKDNNIKSFYLGTPSGNFKAIDNHGKEITNRKGLPNVCRVHGNM", - "protein_translation_length": 1411, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28911" - ], - [ - "gene_synonym", - "ECK3467" - ], - [ - "gene_synonym", - "yhhH" - ], - [ - "gene_synonym", - "ASAP:ABE-0011373" - ], - [ - "gene_synonym", - "b3483" - ], - [ - "gene_synonym", - "JW3449" - ], - [ - "gene_synonym", - "EcoGene:EG11520" - ], - [ - "gene_synonym", - "GeneID:947993" - ], - [ - "gene_synonym", - "NP_417940.2" - ], - [ - "gene_synonym", - "GI:90111598" - ] - ], - "dna_sequence": "ATGTCTGCAGAGTTCATGGTAATATGTAAAAAAATATTGTTTAGGAACTGTGTCATTGTATCTTTGTTTGTTTTTACATACAACACATGGGCGCAGTGTAATAATAATATTAAAATAATGCGCAAGTATGAAAGTGAAGGTAAATATACCGTTAGAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTACCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAA", - "dna_sequence_length": 384, - "functions": [ - "putative NTF2 fold immunity protein for polymorphic toxin RhsB" - ], - "id": "CDS_3419", - "location": [ - [ - "NC_000913", - 3623399, - "+", - 384 - ] - ], - "md5": "179df13dcd005e7c330e8ef91b38e675", - "parent_gene": "", - "protein_md5": "b63fb11714ba2af00abcadccf55dc08f", - "protein_translation": "MSAEFMVICKKILFRNCVIVSLFVFTYNTWAQCNNNIKIMRKYESEGKYTVRNLVKNKAIALELAEIYVKNRYGQDAAEEEKPYEITELTTSWVVEGTIHSDQIAGGVFIIEIGKNDGRILNFGHGK", - "protein_translation_length": 127, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:1450291" - ], - [ - "gene_synonym", - "b4552" - ], - [ - "gene_synonym", - "EcoGene:EG14369" - ], - [ - "gene_synonym", - "ASAP:ABE-0285073" - ], - [ - "gene_synonym", - "ECK3468" - ], - [ - "gene_synonym", - "yrhC" - ], - [ - "gene_synonym", - "JW5678" - ] - ], - "dna_sequence": "ATGTCAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATAAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACTTGATGATCGCAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGGGGGCAAGACGCTGTTAGATTGGCAATTGAATTCTGCACTGACAAAAATTATATCCGTAGAGATATCGGAGCATTTATACTCGGGCAAATATAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGTGCTTGCGTTCGAGCTACGGCAATCGAGTCAACGGCCAGG", - "dna_sequence_length": 351, - "id": "CDS_3420", - "location": [ - [ - "NC_000913", - 3623887, - "+", - 351 - ] - ], - "md5": "372f0882ee733a544abe87c35679f387", - "parent_gene": "", - "protein_md5": "6c702897ef8c9556ac210c1b8b619da7", - "protein_translation": "MSNTYQKRKASKEYGLYNKCKKLNDDELFRLLDDRNSLKRISSARVLQLRGGQDAVRLAIEFCTDKNYIRRDIGAFILGQI", - "protein_translation_length": 81, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011377" - ], - [ - "gene_synonym", - "JW3451" - ], - [ - "gene_synonym", - "GeneID:947992" - ], - [ - "gene_synonym", - "NP_417941.1" - ], - [ - "gene_synonym", - "ECK3469" - ], - [ - "gene_synonym", - "GI:16131356" - ], - [ - "gene_synonym", - "yhhI" - ], - [ - "gene_synonym", - "EcoGene:EG11525" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28912" - ], - [ - "gene_synonym", - "b3484" - ] - ], - "dna_sequence": "ATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTGGAACATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCAGAAGGTTGGGAAGATATAGAGGATTTTGGGGAAACACATCTCGATTTTTTGAAGCAATATGGTGATTTTGAAAATGGTATTCCTGTTCACGATACCATTGCCAGAGTTGTATCCTGTATCAGTCCTGCAAAATTTCACGAGTGCTTTATTAACTGGATGCGTGACTGCCATTCTTCAGATGATAAAGACGTCATTGCAATTGATGGAAAAACGCTCCGGCACTCTTATGACAAGAGTCGCCGCAGGGGAGCGATTCATGTCATTAGTGCGTTCTCAACAATGCACAGTCTGGTCATCGGACAGATCAAGACGGATGAGAAATCTAATGAGATTACAGCTATCCCAGAACTTCTTAACATGCTGGATATTAAAGGAAAAATCATCACAACTGATGCGATGGGTTGCCAGAAAGATATTGCAGAGAAGATACAAAAACAGGGAGGTGATTATTTATTCGCGGTAAAAGGAACCCAGGGGCGGCTAAATAAAGCCTTTGAGGAAAAATTTCCGCTGAAAGAATTAAATAATCCAGAGCATGACAGTTACGCAATCAGTGAAAAGAGTCACGGCAGAGAAGAAATCCGTCTTCATATTGTTTGCGATGTCCCTGATGAACTTATTGATTTCACGTTTGAATGGAAAGGGCTGAAGAAATTATGCGTGGCAGTCTCCTTTCGGTCCATAATAGCAGAACAAAAGAAAGAGCCAGAAATGACGGTCAGATATTATATCAGTTCTGCTGATTTAACCGCTGAGAAATTCGCCACAGCGATCCGAAATCACTGGCACGTGGAGAATAAGCTGCACTGGCGTCTGGACGTGGTAATGAATGAAGACGACTGCAAAATAAGAAGAGGAAATGCAGCAGAATTATTTTCAGGGATACGGCACATTGCTATTAATATTTTGACGAATGATAAGGTATTCAAGGCAGGGTTAAGACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAA", - "dna_sequence_length": 1137, - "functions": [ - "putative transposase" - ], - "id": "CDS_3421", - "location": [ - [ - "NC_000913", - 3624378, - "+", - 1137 - ] - ], - "md5": "6c188688fc3d21c45160dd8dc5bc1536", - "parent_gene": "", - "protein_md5": "a86d0c1ed049aa788670d814e60237c6", - "protein_translation": "MELKKLMEHISIIPDYRQTWKVEHKLSDILLLTICAVISGAEGWEDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSDDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDEKSNEITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGTQGRLNKAFEEKFPLKELNNPEHDSYAISEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKEPEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFSGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAGSGLS", - "protein_translation_length": 378, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3470" - ], - [ - "gene_synonym", - "EcoGene:EG11767" - ], - [ - "gene_synonym", - "GeneID:947991" - ], - [ - "gene_synonym", - "GI:226524752" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGH1" - ], - [ - "gene_synonym", - "yhhJ" - ], - [ - "gene_synonym", - "ASAP:ABE-0011379" - ], - [ - "gene_synonym", - "JW5677" - ], - [ - "gene_synonym", - "NP_417942.6" - ], - [ - "gene_synonym", - "b3485" - ] - ], - "dna_sequence": "ATGCGCCATTTACGCAATATTTTTAATCTGGGTATCAAAGAGTTGCGCAGTCTGCTCGGTGATAAAGCGATGCTGACGCTGATTGTCTTCTCGTTTACGGTGTCGGTGTATTCGTCAGCGACCGTTACGCCAGGATCGTTGAACCTCGCGCCGATCGCCATTGCCGATATGGATCAATCGCAGTTATCGAACCGGATCGTTAACAGCTTCTATCGTCCGTGGTTTTTGCCACCGGAGATGATCACCGCCGATGAGATGGATGCCGGACTGGACGCCGGACGCTATACCTTCGCGATAAATATTCCGCCTAATTTTCAGCGTGATGTCCTCGCCGGACGCCAGCCGGATATTCAGGTGAACGTCGATGCCACGCGCATGAGCCAGGCATTTACCGGCAATGGGTATATCCAGAATATTATCAACGGTGAAGTGAACAGCTTTGTCGCGCGCTACCGTGATAACAGCGAACCGTTGGTATCGCTGGAAACCCGGATGCGCTTTAACCCGAACCTCGATCCCGCGTGGTTTGGCGGGGTGATGGCGATCATCAACAACATTACCATGCTGGCGATTGTATTGACCGGATCGGCGCTGATCCGCGAGCGTGAACACGGCACGGTGGAACACTTACTGGTGATGCCGATAACGCCGTTTGAGATCATGATGGCGAAGATCTGGTCGATGGGGCTGGTGGTGCTGGTGGTATCGGGATTATCGCTGGTGCTGATGGTGAAAGGTGTACTGGGCGTACCGATTGAAGGCTCGATCCCGCTGTTTATGCTGGGCGTGGCGCTCAGTCTGTTTGCCACCACGTCAATCGGCATTTTTATGGGGACGATAGCGCGTTCAATGCCGCAACTGGGGCTGCTGGTGATTCTGGTGCTGCTGCCGCTGCAAATGCTTTCCGGTGGTTCCACGCCGCGCGAAAGTATGCCGCAGATGGTGCAGGACATTATGCTGACCATGCCGACGACACACTTTGTTAGCCTCGCGCAGGCCATCCTCTACCGGGGTGCCGGATTCGAAATCGTCTGGCCGCAGTTTCTGACGCTGATGGCAATTGGCGGCGCATTTTTCACCATTGCGCTGCTGCGATTCAGGAAGACGATTGGGACAATGGCGTAA", - "dna_sequence_length": 1125, - "functions": [ - "putative ABC transporter permease" - ], - "id": "CDS_3422", - "location": [ - [ - "NC_000913", - 3626803, - "-", - 1125 - ] - ], - "md5": "fc50bc0ff0c7b2814c262035781d262f", - "parent_gene": "", - "protein_md5": "1c91ed2264018ff0eebbbf36e224c475", - "protein_translation": "MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTPGSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIPPNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVSLETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPFEIMMAKIWSMGLVVLVVSGLSLVLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIFMGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAILYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA", - "protein_translation_length": 374, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3471" - ], - [ - "gene_synonym", - "yhiG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37624" - ], - [ - "gene_synonym", - "ASAP:ABE-0011381" - ], - [ - "gene_synonym", - "EcoGene:EG12223" - ], - [ - "gene_synonym", - "yhiH" - ], - [ - "gene_synonym", - "GeneID:947998" - ], - [ - "gene_synonym", - "GI:49176363" - ], - [ - "gene_synonym", - "YP_026225.1" - ], - [ - "gene_synonym", - "b3486" - ], - [ - "gene_synonym", - "JW5676" - ], - [ - "gene_synonym", - "rbbA" - ] - ], - "dna_sequence": "ATGACGCATCTGGAACTGGTTCCCGTCCCGCCTGTCGCGCAACTGGCGGGCGTGAGCCAGCATTATGGAAAAACCGTTGCGCTGAACAATATCACTCTCGATATTCCGGCCCGCTGTATGGTCGGGCTGATTGGCCCGGACGGCGTCGGGAAGTCGAGCTTGTTGTCGTTGATTTCCGGTGCCCGCGTCATTGAACAGGGCAATGTGATGGTGCTGGGCGGCGATATGCGCGACCCGAAGCATCGCCGCGACGTCTGCCCGCGCATCGCCTGGATGCCGCAGGGGCTGGGCAAAAACCTCTACCACACCTTGTCGGTGTATGAAAACGTCGATTTTTTCGCTCGCCTGTTCGGTCACGACAAAGCGGAGCGGGAAGTGCGAATCAATGAGCTGCTGACCAGCACCGGGTTAGCACCGTTTCGCGATCGTCCGGCAGGGAAACTCTCCGGCGGGATGAAGCAAAAACTTGGGCTGTGCTGCGCGTTAATCCACGACCCGGAACTGTTGATCCTTGATGAGCCAACAACGGGGGTTGACCCGCTCTCCCGCTCCCAGTTCTGGGATCTGATCGACAGTATTCGCCAGCGGCAGAGCAATATGAGCGTGCTGGTCGCCACCGCCTATATGGAAGAGGCCGAACGCTTCGACTGGCTGGTAGCGATGAATGCCGGAGAAGTGCTGGCAACTGGCAGCGCCGAAGAGCTACGGCAGCAAACGCAAAGCGCTACGCTGGAAGAAGCATTTATAAATCTGTTACCGCAAGCGCAACGCCAGGCGCATCAGGCGGTAGTGATCCCACCGTATCAACCTGAAAACGCAGAGATTGCCATCGAAGCGCGCGATCTGACCATGCGTTTTGGTTCCTTCGTTGCCGTTGATCACGTTAATTTCCGCATTCCACGCGGGGAGATTTTTGGTTTTCTTGGTTCGAACGGCTGCGGTAAATCCACCACCATGAAAATGCTCACCGGACTGCTGCCCGCCAGCGAAGGTGAGGCGTGGCTGTTCGGGCAACCGGTTGATCCAAAAGATATCGATACCCGCCGTCGGGTGGGCTATATGTCGCAGGCGTTTTCGCTCTATAACGAACTCACCGTGCGGCAAAACCTTGAGTTACATGCCCGTTTGTTTCACATCCCGGAAGCGGAAATTCCCGCAAGAGTGGCTGAAATGAGCGAGCGTTTTAAGCTCAACGACGTTGAAGATATTCTGCCGGAGTCATTGCCGCTCGGCATTCGCCAGCGGCTTTCGCTGGCGGTGGCGGTGATTCATCGCCCGGAGATGTTAATCCTCGATGAGCCTACTTCTGGTGTCGATCCGGTGGCGAGGGATATGTTCTGGCAGTTGATGGTCGATCTCTCGCGCCAGGACAAAGTGACTATCTTCATCTCCACCCACTTTATGAACGAAGCGGAACGTTGCGACCGCATCTCACTGATGCACGCCGGAAAAGTGCTTGCCAGCGGTACACCGCAGGAACTGGTTGAGAAACGCGGAGCCGCCAGTCTGGAAGAGGCATTTATCGCCTATTTGCAGGAAGCGGCAGGGCAGAGCAACGAAGCCGAAGCGCCGCCCGTGGTACACGACACCACCCACGCGCCGCGTCAGGGATTTAGCCTGCGCCGTCTGTTTAGCTACAGCCGCCGCGAAGCGCTGGAACTGCGACGCGATCCAGTACGTTCGACGCTGGCGCTGATGGGAACGGTGATCCTGATGCTGATAATGGGTTACGGCATCAGTATGGATGTGGAAAACCTGCGCTTTGCGGTGCTCGACCGCGACCAGACCGTCAGTAGCCAGGCGTGGACACTCAACCTCTCCGGTTCCCGTTACTTTATCGAACAGCCGCCGCTCACCAGTTATGACGAGCTTGATCGTCGGATGCGTGCGGGCGATATCACGGTGGCGATTGAGATCCCGCCCAATTTCGGGCGCGATATCGCGCGTGGTACGCCTGTGGAACTCGGCGTCTGGATCGACGGAGCGATGCCGAGCCGTGCTGAAACGGTAAAAGGTTACGTGCAGGCCATGCACCAGAGCTGGTTACAGGATGTGGCGAGCCGACAATCGACACCCGCCAGCCAAAGCGGGCTGATGAATATTGAGACGCGCTATCGCTATAACCCGGACGTAAAAAGCCTGCCAGCGATTGTTCCGGCGGTGATCCCGCTTCTGCTGATGATGATCCCGTCAATGCTAAGCGCCCTTAGCGTGGTGCGGGAAAAAGAGCTTGGGTCGATTATCAACCTTTACGTGACCCCCACCACGCGTAGTGAATTTTTGCTTGGTAAACAGTTGCCATACATCGCGCTGGGGATGCTGAACTTTTTCCTGCTCTGCGGCCTGTCGGTGTTTGTGTTTGGCGTACCGCATAAAGGCAGTTTCCTGACGCTCACCCTGGCGGCGCTGCTGTATATCATCATTGCCACCGGAATGGGGCTGCTGATCTCCACCTTTATGAAAAGCCAGATTGCCGCCATTTTCGGAACGGCGATTATCACGTTGATCCCGGCGACACAGTTTTCCGGGATGATCGATCCGGTAGCTTCGCTGGAAGGGCCTGGACGTTGGATCGGCGAGGTTTACCCGACCAGTCATTTTCTGACTATCGCCCGCGGGACGTTCTCGAAAGCGCTGGATCTGACTGATTTGTGGCAACTTTTTATCCCGTTACTGATAGCCATCCCGCTGGTGATGGGCTTAAGTATCCTGCTGCTGAAAAAACAGGAGGGATGA", - "dna_sequence_length": 2736, - "functions": [ - "ribosome-associated ATPase: ATP-binding protein/ATP-binding membrane protein" - ], - "id": "CDS_3423", - "location": [ - [ - "NC_000913", - 3629538, - "-", - 2736 - ] - ], - "md5": "b275fc9b5ac49a948a1f7a4120752dfe", - "parent_gene": "", - "protein_md5": "132f1ca6f631dd106ff535914a7e7db0", - "protein_translation": "MTHLELVPVPPVAQLAGVSQHYGKTVALNNITLDIPARCMVGLIGPDGVGKSSLLSLISGARVIEQGNVMVLGGDMRDPKHRRDVCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREVRINELLTSTGLAPFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLIDSIRQRQSNMSVLVATAYMEEAERFDWLVAMNAGEVLATGSAEELRQQTQSATLEEAFINLLPQAQRQAHQAVVIPPYQPENAEIAIEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERFKLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTPQELVEKRGAASLEEAFIAYLQEAAGQSNEAEAPPVVHDTTHAPRQGFSLRRLFSYSRREALELRRDPVRSTLALMGTVILMLIMGYGISMDVENLRFAVLDRDQTVSSQAWTLNLSGSRYFIEQPPLTSYDELDRRMRAGDITVAIEIPPNFGRDIARGTPVELGVWIDGAMPSRAETVKGYVQAMHQSWLQDVASRQSTPASQSGLMNIETRYRYNPDVKSLPAIVPAVIPLLLMMIPSMLSALSVVREKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFFLLCGLSVFVFGVPHKGSFLTLTLAALLYIIIATGMGLLISTFMKSQIAAIFGTAIITLIPATQFSGMIDPVASLEGPGRWIGEVYPTSHFLTIARGTFSKALDLTDLWQLFIPLLIAIPLVMGLSILLLKKQEG", - "protein_translation_length": 911, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417944.1" - ], - [ - "gene_synonym", - "JW3454" - ], - [ - "gene_synonym", - "ECK3472" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37626" - ], - [ - "gene_synonym", - "ASAP:ABE-0011385" - ], - [ - "gene_synonym", - "GI:16131359" - ], - [ - "gene_synonym", - "EcoGene:EG12224" - ], - [ - "gene_synonym", - "yhiI" - ], - [ - "gene_synonym", - "b3487" - ], - [ - "gene_synonym", - "GeneID:948003" - ] - ], - "dna_sequence": "ATGGATAAGAGTAAGCGCCATCTGGCGTGGTGGGTTGTCGGGTTACTGGCGGTGGCGGCTATCGTGGCGTGGTGGCTGTTGCGCCCGGCAGGTGTGCCGGAAGGCTTTGCTGTCAGTAATGGGCGCATTGAAGCGACGGAAGTGGATATTGCCAGCAAAATTGCCGGGCGTATCGACACCATTCTGGTGAAAGAAGGCAAGTTTGTTCGCGAAGGTGAAGTGCTGGCGAAGATGGATACTCGCGTGTTGCAGGAACAGCGACTGGAAGCCATCGCGCAAATCAAAGAGGCACAAAGCGCCGTTGCTGCCGCGCAGGCTTTGCTGGAGCAACGACAAAGCGAAACTCGTGCCGCACAGTCGCTGGTTAATCAACGCCAGGCAGAACTGGACTCCGTAGCAAAACGTCATACGCGTTCCCGTTCACTGGCCCAACGAGGGGCTATTTCTGCGCAACAGCTGGATGACGATCGCGCCGCCGCTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCGGCTATAGAAGCGGCACGCACCAATATCATTCAGGCGCAAACCCGCGTCGAAGCGGCACAAGCCACTGAACGGCGCATTGCCGCAGATATCGATGACAGCGAACTGAAAGCCCCGCGTGACGGACGCGTGCAGTATCGGGTTGCCGAGCCAGGCGAAGTGCTGGCGGCAGGCGGTCGGGTGCTGAATATGGTCGATCTCAGCGACGTCTATATGACTTTCTTCCTGCCAACCGAACAGGCGGGCACGCTGAAACTGGGCGGTGAAGCCCGGCTGATCCTCGATGCCGCGCCAGATCTGCGTATTCCTGCAACCATCAGTTTTGTCGCCAGTGTCGCCCAGTTCACGCCAAAAACCGTCGAAACCAGCGATGAACGGCTGAAACTGATGTTCCGCGTCAAAGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGACCTCGTGGTGAGGTTGCCGCAATGA", - "dna_sequence_length": 1068, - "functions": [ - "putative membrane fusion protein (MFP) of efflux pump" - ], - "id": "CDS_3424", - "location": [ - [ - "NC_000913", - 3630602, - "-", - 1068 - ] - ], - "md5": "537508ca7f4883420c2528de158dae2e", - "parent_gene": "", - "protein_md5": "82153059ab63f9337b8d2ec8e11a0775", - "protein_translation": "MDKSKRHLAWWVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATEVDIASKIAGRIDTILVKEGKFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISAQQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPRDGRVQYRVAEPGEVLAAGGRVLNMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNEELPWPDDLVVRLPQ", - "protein_translation_length": 355, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3455" - ], - [ - "gene_synonym", - "GI:16131360" - ], - [ - "gene_synonym", - "ECK3473" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37627" - ], - [ - "gene_synonym", - "NP_417945.1" - ], - [ - "gene_synonym", - "yhiJ" - ], - [ - "gene_synonym", - "EcoGene:EG12225" - ], - [ - "gene_synonym", - "ASAP:ABE-0011387" - ], - [ - "gene_synonym", - "b3488" - ], - [ - "gene_synonym", - "GeneID:948001" - ] - ], - "dna_sequence": "ATGAAAATTGGAACTGTGGCAGGCACTAACGACAGTACAACGACAATCGCAACAAATGATATGGTGCAAGAGCATGTTACCAACTTCACTAAAGAACTGTTTGGGTATATTGCAAATGGTATAGGTGATGATATATCAAGTATTGCCAGGACAATGCTCGGTGAGGTTGTGGAAAAAATAGATGATTGGCAAATAGAACGGTTCCAACAATCTATTCAAGATGACAAAATTTCATTTACCATACAAACGGATCATTCAGAAAAATATAGTATGCTATCGGGCATGCGTGCTCATATTCTACGTAGGAATAATAATTATCAGTTTATTGTGACAATTAATAGCAAAAATTACGGTTGCTCTCTTGATAATACCGATATTAATTGGTGCAGTATTGTTTATTTACTTAATAATATGACAGTAAATGATAATGCTAATGATGTTGCAGTTACTGAGTCGTACAAACCCATCTGGAACTGGAAAATATCGCAATATAATGTATCTGATATTAAATTCGAAACAATGATAAAACCCCAGTTCGCTGACAGAATCTATTTCTCCAATTGTTTACCCGTTGATCCCACAAGTACCAGACCAACCTATTTTGGTGATACCGATGGCTCAGTCGGTGCAGTTTTGTTCGCGCTTTTCGCAACGGGACATTTGGGAATCATGGCTGAAGGAGAAAATTTCCTTAGCCAGTTGCTTAATATAGAAGATGAAGTTCTCAACGTATTGCTAAGGGAGAACTTTAATGAGCAACTTAACACTAATGTTAATACAATAATCAGTATCCTGAACAGAAGAGACATTATTTTAGAAAGTCTTCAGCCTTATTTAGTTATTAATAAAGACGCTGTGACGCCATGTACGTTTCTGGGCGACCAAACCGGCGATCGATTTAGCAATATCTGTGGTGATCAATTTATCATCGATTTGTTAAAACGCATAATGAGTATCAATGAAAATGTTCATGTATTAGCTGGAAATCATGAAACGAATTGCAATGGTAACTATATGCAGAACTTCACGCGTATGAAACCACTCGATGAGGATACCTACTCTGGGATAAAAGATTATCCTGTATGTTTCTATGACCCCAAATACAAAATAATGGCAAATCATCATGGGATAACTTTTGATGATCAGCGAAAACGTTACATTATAGGACCGATAACAGTCTCTATTGATGAAATGACCAATGCTCTCGATCCGGTCGAATTAGCGGCAATTATCAATAAAAAGCATCATGCTATAATTAATGGCAAAAAGTTTAAAACTAGCCGGGCTATCTCTTGTCGATCCTTTAATCGTTATTTTTCTGTTTCGACAGATTACAGACCTAAACTTGAAGCACTATTAGCATGTTCACAAATGTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAACATGCTGGAAGAATGTTCAGCATGCATAATTGCCAAATTAACCCTGGTGCAGGGCCTGAGATAACCACTCCCTGGAAGTCTTACCAGCATGAAAAAAACAGAAATGGACTTATGCCTTTGATTAGAAGGCGCACAATGTTACAGCTCTGA", - "dna_sequence_length": 1623, - "functions": [ - "DUF4049 family protein" - ], - "id": "CDS_3425", - "location": [ - [ - "NC_000913", - 3632590, - "-", - 1623 - ] - ], - "md5": "9a6d557c3d69dfef9b35bdf10361f0a0", - "parent_gene": "", - "protein_md5": "aaf88a9e5ade16162b329639890e0f17", - "protein_translation": "MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDDISSIARTMLGEVVEKIDDWQIERFQQSIQDDKISFTIQTDHSEKYSMLSGMRAHILRRNNNYQFIVTINSKNYGCSLDNTDINWCSIVYLLNNMTVNDNANDVAVTESYKPIWNWKISQYNVSDIKFETMIKPQFADRIYFSNCLPVDPTSTRPTYFGDTDGSVGAVLFALFATGHLGIMAEGENFLSQLLNIEDEVLNVLLRENFNEQLNTNVNTIISILNRRDIILESLQPYLVINKDAVTPCTFLGDQTGDRFSNICGDQFIIDLLKRIMSINENVHVLAGNHETNCNGNYMQNFTRMKPLDEDTYSGIKDYPVCFYDPKYKIMANHHGITFDDQRKRYIIGPITVSIDEMTNALDPVELAAIINKKHHAIINGKKFKTSRAISCRSFNRYFSVSTDYRPKLEALLACSQMLGINQVVAHNGNGGRERIGETGTVLGLNARDSKHAGRMFSMHNCQINPGAGPEITTPWKSYQHEKNRNGLMPLIRRRTMLQL", - "protein_translation_length": 540, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3475" - ], - [ - "gene_synonym", - "ASAP:ABE-0011391" - ], - [ - "gene_synonym", - "yhiL" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37629" - ], - [ - "gene_synonym", - "EcoGene:EG12227" - ], - [ - "gene_synonym", - "GeneID:947999" - ], - [ - "gene_synonym", - "yhiK" - ], - [ - "gene_synonym", - "b4660" - ], - [ - "gene_synonym", - "JW5674" - ], - [ - "gene_synonym", - "ASAP:ABE-0011393" - ] - ], - "dna_sequence": "ATGAAAGCAATTGACAATCAGATTAGAAACATCTCTTCAAGCCATCAAGATAAGCATTCAGATAAAGTTAACAGTCATCAACACCATGGCAAGGTTGATAAAACACATCGTGCAAAGATAGTTGAATTTGATAAACTGGATAATGATTCGCAAATAGATAACGATTTTGGCCTGCATATCATCTATTTCCTGCAACATGGTCACTGGAAGGTAAATGATCGTAGTCACCAGATGGAGAAAGTATGGTTTTATAATAGTGAACCTTCTATAGATATTCAAGAATATAATAGATTCGCCGACAATACTACTGATACGTTTATCTTTACAATTATACCAGACAATAACCATGTGTTAAAATTATCGTCTCCCATTACCGTTACTGTTGAGTGTAAGGGCGGTTATTATTTTATTAATTCCTCTGGAGATAAATCAGATATAATTTATAAAGTTGATGGGCTTTCTATCATAGCGAGAAATTTCTTTACTCTTCTTAGTGGTAATTTCAAACCTGACTGGCGTTGGGATGTCTCTAAAGAGACGTTTACTAAGGAAAAGTTTGATAGCTATGTTAAATCTGTGTTTTCAAAAATAGACTTCTATAAACAGTGTGGTGTGATTAACCCACAAAATGCCAACACGGCTTATTTTGGCGATACAGATGGAAGAGTAGGCGCTGTACTTTATGCATTGCTCGTTTCAGGGCATATAGGCATCAGGGAAAAGGGTTGGAGTTTATTATGTGAATTATTAAAACACGAAGAGATGGCTTCATCTGCATACAAACATAAAAATAATAAAGTGCTCTACGATTTATTAAATACGAGAGACATGATCTTGAATGAGTTGCATCAACATGTTTTTTTAAAGGACGATGCGATAACCCCTTGTATCTTCCTTGGGGATCATACAGGCGATAGATTTAGTACTATTTTTGGTGATAAATATATCCTTACTTTGCTAAATTCTATGCGAAATATGGAGGGTAATAAAGATAGCCGTATTAATAAAAATGTCGTCGTTCTGGCTGGAAATCATGAAATCAATTTTAATGGTAACTATACTGCACGACTAGCAAATCATAAACTCTCTGCCGGTGATACGTATAACTTAATTAAAACGCTCGATGTTTGTAATTATGACTCAGAAAGGCAAGTTTTAACCAGTCATCACGGAATAATAAGAGATGAAGAAAAAAAATGTTATTGTCTCGGTGCTTTGCAGGTTCCATTTAATCAGATGAAAAATCCTACTGATCCTGAGGAATTAGCCAATATTTTTAATAAAAAACATAAAGAACACATGGATGATCCTCTATTCCATCTAATCCGAAGCAATACTTTGAAACCCACACCTGTATATGCTAATTATTTTGATAACACTACTGATTTCAGACCAGCACGTGAACGTATCTTCATATGTGGGGAGACACTCAAAGGTGAAGACCCCAGCAAATACATTAGACAAAAATATGGGCATCATGGGCCCGGGGTAGATCATAATCAACAATTTGATAATGGTATTATGGGGCTAAATTCCCTGAAGGAAGCACGTGATAAAAATAATAAAATAATTTATTCCTCAGGGCTTAGTTGTTTTCAACTACATTAA", - "dna_sequence_length": 1608, - "id": "CDS_3426", - "location": [ - [ - "NC_000913", - 3634458, - "-", - 1194 - ], - [ - "NC_000913", - 3633265, - "-", - 414 - ] - ], - "md5": "ae0d3024e3bafa29991c62e9f528c66f", - "parent_gene": "", - "protein_md5": "653d7bb047457f4eb3cf6097384379c2", - "protein_translation": "MKAIDNQIRNISSSHQDKHSDKVNSHQHHGKVDKTHRAKIVEFDKLDNDSQIDNDFGLHIIYFLQHGHWKVNDRSHQMEKVWFYNSEPSIDIQEYNRFADNTTDTFIFTIIPDNNHVLKLSSPITVTVECKGGYYFINSSGDKSDIIYKVDGLSIIARNFFTLLSGNFKPDWRWDVSKETFTKEKFDSYVKSVFSKIDFYKQCGVINPQNANTAYFGDTDGRVGAVLYALLVSGHIGIREKGWSLLCELLKHEEMASSAYKHKNNKVLYDLLNTRDMILNELHQHVFLKDDAITPCIFLGDHTGDRFSTIFGDKYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINFNGNYTARLANHKLSAGDTYNLIKTLDVCNYDSERQVLTSHHGIIRDEEKKCYCLGALQVPFNQMKNPTDPEELANIFNKKHKEHMDDPLFHLIRSNTLKPTPVYANYFDNTTDFRPARERIFICGETLKGEDPSKYIRQKYGHHGPGVDHNQQFDNGIMGLNSLKEARDKNNKIIYSSGLSCFQLH", - "protein_translation_length": 535, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37630" - ], - [ - "gene_synonym", - "GeneID:947997" - ], - [ - "gene_synonym", - "EcoGene:EG12228" - ], - [ - "gene_synonym", - "ECK3476" - ], - [ - "gene_synonym", - "yhiM" - ], - [ - "gene_synonym", - "GI:226524753" - ], - [ - "gene_synonym", - "ASAP:ABE-0011400" - ], - [ - "gene_synonym", - "NP_417948.4" - ], - [ - "gene_synonym", - "JW5944" - ], - [ - "gene_synonym", - "b3491" - ] - ], - "dna_sequence": "GTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAATACGTTTTACAATACATTGTTCCCCATTATTGGCTATGCGGGGTCAATTATCACCATGATATGGGGTTGGGCACTGTTAGCAGGCAATGATGTGATGGCAGACGAGTTTGTCGCCGGCCATGTTATTTTCGGCGTTGGTATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCATTAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTACGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTCGCGGGTCACGTATTGCTTGGGTTAACCGCAATCTGTGCCTGTCTAATTGGCCTTGTTGCCACAATTGTCCATCAAACACGTAATACGTTTTCAACTAAAGAACACTGGCTGTGGTGTTATTGGGTTATTTTTCTCGGCTCAATCACGGTACTGCAGGGGATATACGTCTTAGTCAGTTCCGATGCAAGCGCCCGACTGGCTCCCGGCATTATTCTTATTTGCCTCGGAATGATCTGTTACAGCATATTCTCAAAAGTCTGGCTACTGGCACTGGTATGGAGACGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGCCTTTTCCTGGCATCGTTTCTTGCGGAAATGGCGCAGACCGACATGGGATATTTTATTCCTTCGCGAGTTCTGGTCGGTTTGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAA", - "dna_sequence_length": 1053, - "functions": [ - "acid resistance protein, inner membrane" - ], - "id": "CDS_3427", - "location": [ - [ - "NC_000913", - 3634841, - "+", - 1053 - ] - ], - "md5": "5b717dff3f4ecb87175eeacdd02ced85", - "parent_gene": "", - "protein_md5": "060ec27a8983fb9df2fcb8faaf761b41", - "protein_translation": "MNIYIGWLFKLIPLIMGLICIALGGFVLESSGQSEYFVAGHVLISLAAICLALFTTAFIIISQLTRGVNTFYNTLFPIIGYAGSIITMIWGWALLAGNDVMADEFVAGHVIFGVGMIAACVSTVAASSGHFLLIPKNAAGSKSDGTPVQAYSSLIGNCLIAVPVLLTLLGFIWSITLLRSADITPHYVAGHVLLGLTAICACLIGLVATIVHQTRNTFSTKEHWLWCYWVIFLGSITVLQGIYVLVSSDASARLAPGIILICLGMICYSIFSKVWLLALVWRRTCSLANRIPMIPVFTCLFCLFLASFLAEMAQTDMGYFIPSRVLVGLGAVCFTLFSIVSILEAGSAKK", - "protein_translation_length": 350, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37631" - ], - [ - "gene_synonym", - "GeneID:947996" - ], - [ - "gene_synonym", - "EcoGene:EG12229" - ], - [ - "gene_synonym", - "GI:16131364" - ], - [ - "gene_synonym", - "ECK3477" - ], - [ - "gene_synonym", - "ASAP:ABE-0011402" - ], - [ - "gene_synonym", - "yhiN" - ], - [ - "gene_synonym", - "JW3459" - ], - [ - "gene_synonym", - "NP_417949.1" - ], - [ - "gene_synonym", - "b3492" - ] - ], - "dna_sequence": "GTGGAAAGGTTTGATGCCATTATTATAGGCGCTGGTGCGGCGGGTATGTTCTGTTCTGCGCTGGCAGGTCAGGCAGGACGCCGGGTTCTGCTGATCGATAATGGTAAAAAACCAGGGCGCAAAATCCTTATGTCTGGCGGTGGGCGCTGCAACTTTACCAACCTTTATGTCGAACCAGGCGCTTATCTGAGCCAGAATCCGCATTTTTGTAAGTCTGCACTCGCACGTTTTACCCAGTGGGATTTCATTGATCTGGTCAATAAACACGGCATCGCCTGGCACGAGAAAACGTTAGGGCAACTCTTCTGCGATGACTCCGCGCAGCAGATTGTCGACATGCTGGTGGATGAGTGCGAGAAGGGCAATGTGACCTTCAGATTGCGTAGCGAAGTGCTGAGTGTGGCGAAGGATGAAACAGGCTTCACGCTTGATCTGAACGGCATGACTGTCGGTTGCGAAAAGCTGGTCATCGCGACTGGTGGGCTGTCAATGCCGGGGCTGGGCGCGTCGCCGTTTGGTTATAAGATTGCCGAACAATTTGGCCTCAACGTGCTGCCGACCCGCGCGGGTCTGGTGCCATTCACTCTGCATAAACCGTTGCTCGAAGAGTTACAGGTGCTGGCGGGCGTGGCGGTGCCTTCCGTGATTACCGCTGAAAACGGCACCGTTTTCCGTGAGAACTTACTCTTCACCCACCGCGGCTTGTCTGGACCGGCGGTGTTGCAGATTTCAAGCTACTGGCAACCGGGGGAATTTGTCAGCATCAATCTGCTACCGGATGTGGACCTCGAAACCTTCCTGAATGAGCAGCGTAACGCACATCCGAATCAAAGCCTGAAAAACACACTGGCGGTTCATCTACCGAAGCGGTTGGTTGAACGCTTACAGCAACTCGGGCAAATCCCGGATGTTTCGCTAAAACAGCTCAACGTGCGTGACCAACAGGCACTGATTAGCACATTGACCGACTGGCGCGTACAACCCAACGGCACTGAAGGCTATCGCACTGCCGAAGTGACGCTCGGCGGCGTGGACACCAACGAACTCTCTTCACGGACGATGGAAGCGCGCAAAGTGCCTGGGCTGTACTTCATCGGCGAAGTGATGGACGTCACCGGCTGGCTGGGGGGCTATAACTTCCAGTGGGCGTGGTCGAGTGCGTGGGCTTGTGCGCAGGATTTGATTGCAGCAAAGTCGTCCTGA", - "dna_sequence_length": 1203, - "functions": [ - "putative oxidoreductase" - ], - "id": "CDS_3428", - "location": [ - [ - "NC_000913", - 3637410, - "-", - 1203 - ] - ], - "md5": "c5c91d2f08ec65a08b3f42c31cafc742", - "parent_gene": "", - "protein_md5": "4540c32d5ff8d502bb271f3a96f8c5d5", - "protein_translation": "MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLDLNGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSS", - "protein_translation_length": 400, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3460" - ], - [ - "gene_synonym", - "GI:16131365" - ], - [ - "gene_synonym", - "ECK3478" - ], - [ - "gene_synonym", - "ASAP:ABE-0011407" - ], - [ - "gene_synonym", - "EcoGene:EG12230" - ], - [ - "gene_synonym", - "GeneID:948009" - ], - [ - "gene_synonym", - "pitA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFJ7" - ], - [ - "gene_synonym", - "NP_417950.1" - ], - [ - "gene_synonym", - "pit" - ], - [ - "gene_synonym", - "b3493" - ] - ], - "dna_sequence": "ATGCTACATTTGTTTGCTGGCCTGGATTTGCATACCGGGCTGTTATTATTGCTTGCACTGGCTTTTGTGCTGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGCGGTATTCAACTTTTTGGGTGTTTTGCTGGGTGGTCTGAGTGTTGCCTATGCCATTGTGCATATGCTGCCGACGGATCTGCTGCTTAATATGGGATCGTCTCATGGCCTTGCCATGGTGTTCTCTATGTTGCTGGCGGCGATTATCTGGAACCTGGGTACCTGGTACTTTGGTTTACCTGCATCCAGCTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCAAGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCTTCGTGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAGCAGCATCCTGCGCTGCTCAAACAGGCTACCGGTGCTGATCAGTTAGTACCGGCTCCGGAAGCTGGCGCAACGCAACCTGCGGAGTTCCACTGCCATCCGTCGAATACCATTAACGCGCTCAACCGCCTGAAAGGTATGTTGACCACCGATGTGGAAAGCTACGACAAGCTGTCGCTTGATCAACGTAGCCAGATGCGCCGCATTATGCTGTGCGTTTCTGACACTATCGACAAAGTGGTGAAGATGCCTGGCGTGAGTGCTGACGATCAGCGCCTGTTGAAGAAACTGAAGTCCGACATGCTTAGCACCATCGAGTATGCACCGGTGTGGATCATCATGGCGGTCGCGCTGGCGTTAGGTATCGGTACGATGATTGGCTGGCGCCGTGTGGCAACGACTATCGGTGAGAAAATCGGTAAGAAAGGCATGACCTACGCTCAGGGGATGTCTGCCCAGATGACGGCGGCAGTGTCTATCGGCCTGGCGAGTTATACCGGGATGCCGGTTTCCACTACTCACGTACTCTCCTCTTCTGTCGCGGGGACGATGGTGGTAGATGGTGGCGGCTTACAGCGTAAAACCGTGACCAGCATTCTGATGGCCTGGGTGTTTACCCTTCCGGCTGCGGTACTGCTTTCCGGCGGGCTGTACTGGCTCTCCTTGCAGTTCCTGTAA", - "dna_sequence_length": 1500, - "functions": [ - "phosphate transporter, low-affinity", - "tellurite importer" - ], - "id": "CDS_3429", - "location": [ - [ - "NC_000913", - 3637642, - "+", - 1500 - ] - ], - "md5": "9361ece1680e0637b5909130c6764c2a", - "parent_gene": "", - "protein_md5": "14cfe6a3d3e68d767bd41c320f32a9b9", - "protein_translation": "MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIYTRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLLAAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLIVSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSAIGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQHPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSLDQRSQMRRIMLCVSDTIDKVVKMPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVALALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVLSSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL", - "protein_translation_length": 499, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3461" - ], - [ - "gene_synonym", - "GI:16131366" - ], - [ - "gene_synonym", - "ECK3479" - ], - [ - "gene_synonym", - "yhiO" - ], - [ - "gene_synonym", - "EcoGene:EG12231" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8S5" - ], - [ - "gene_synonym", - "ASAP:ABE-0011410" - ], - [ - "gene_synonym", - "GeneID:948008" - ], - [ - "gene_synonym", - "b3494" - ], - [ - "gene_synonym", - "uspB" - ], - [ - "gene_synonym", - "NP_417951.1" - ] - ], - "dna_sequence": "ATGATAAGCACCGTCGCATTATTTTGGGCTTTATGTGTCGTTTGCATTGTTAACATGGCGCGCTATTTCTCATCACTACGCGCGTTGTTAGTGGTACTGCGTAACTGCGATCCATTGCTCTATCAATATGTTGATGGAGGGGGCTTTTTTACCTCACATGGCCAACCCAACAAACAGGTGCGTCTCGTTTGGTATATCTATGCCCAACGTTATCGCGATCATCACGATGATGAATTTATTCGCCGCTGTGAGCGGGTGCGTCGGCAGTTTATTCTGACCAGCGCATTGTGTGGTCTGGTGGTGGTCAGCCTGATTGCATTGATGATTTGGCATTAA", - "dna_sequence_length": 336, - "functions": [ - "universal stress (ethanol tolerance) protein B" - ], - "id": "CDS_3430", - "location": [ - [ - "NC_000913", - 3639720, - "-", - 336 - ] - ], - "md5": "ec0719f1175f3664cd4623645bc5baff", - "parent_gene": "", - "protein_md5": "c2a2a507453813d4db15fd2112a4401d", - "protein_translation": "MISTVALFWALCVVCIVNMARYFSSLRALLVVLRNCDPLLYQYVDGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDEFIRRCERVRRQFILTSALCGLVVVSLIALMIWH", - "protein_translation_length": 111, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3480" - ], - [ - "gene_synonym", - "JW3462" - ], - [ - "gene_synonym", - "GI:16131367" - ], - [ - "gene_synonym", - "NP_417952.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AED0" - ], - [ - "gene_synonym", - "EcoGene:EG11390" - ], - [ - "gene_synonym", - "ASAP:ABE-0011414" - ], - [ - "gene_synonym", - "b3495" - ], - [ - "gene_synonym", - "uspA" - ], - [ - "gene_synonym", - "GeneID:948007" - ] - ], - "dna_sequence": "ATGGCTTATAAACACATTCTCATCGCGGTCGACCTCTCCCCGGAAAGCAAAGTTCTGGTAGAGAAAGCAGTCTCTATGGCTCGCCCCTACAATGCGAAAGTTTCTCTGATCCACGTAGATGTAAACTACTCTGACCTATACACCGGGCTTATTGATGTGAATCTGGGTGATATGCAGAAACGCATCTCTGAAGAGACACATCATGCACTGACCGAGCTTTCCACTAATGCAGGCTACCCAATCACTGAAACCCTGAGCGGCAGCGGCGACCTGGGCCAGGTTCTGGTCGATGCAATCAAGAAATACGATATGGATTTGGTGGTTTGTGGTCACCACCAGGACTTCTGGAGCAAACTGATGTCTTCCGCACGTCAGCTGATCAACACCGTTCACGTTGATATGCTGATTGTTCCGCTGCGCGACGAAGAAGAATAA", - "dna_sequence_length": 435, - "functions": [ - "universal stress global response regulator" - ], - "id": "CDS_3431", - "location": [ - [ - "NC_000913", - 3640111, - "+", - 435 - ] - ], - "md5": "508f777f8dbce9851a47bbe7d9eecffa", - "parent_gene": "", - "protein_md5": "5c3e9984919757f7cc69deb288ba224a", - "protein_translation": "MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQKRISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE", - "protein_translation_length": 144, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3481" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36837" - ], - [ - "gene_synonym", - "JW3463" - ], - [ - "gene_synonym", - "GI:16131368" - ], - [ - "gene_synonym", - "NP_417953.1" - ], - [ - "gene_synonym", - "dtpB" - ], - [ - "gene_synonym", - "EcoGene:EG12232" - ], - [ - "gene_synonym", - "yhiP" - ], - [ - "gene_synonym", - "ASAP:ABE-0011417" - ], - [ - "gene_synonym", - "GeneID:948006" - ], - [ - "gene_synonym", - "b3496" - ] - ], - "dna_sequence": "ATGAATACAACAACACCCATGGGGATGCTGCAGCAACCTCGCCCATTTTTCATGATCTTTTTTGTCGAGTTATGGGAGCGATTCGGCTACTACGGCGTGCAGGGCGTACTGGCGGTTTTCTTCGTTAAACAGCTTGGATTCTCGCAAGAGCAGGCTTTTGTCACTTTTGGTGCTTTTGCTGCGCTGGTCTATGGCCTCATTTCCATTGGCGGCTATGTCGGCGACCACCTGCTGGGGACCAAACGCACCATTGTTCTTGGAGCACTTGTGCTGGCGATTGGCTACTTCATGACCGGCATGTCGCTACTTAAGCCTGACCTGATTTTCATCGCCCTGGGGACTATCGCTGTCGGTAACGGCCTGTTTAAAGCTAACCCAGCCAGCTTGCTTTCGAAGTGCTATCCGCCGAAAGATCCGCGGCTTGATGGCGCATTCACCCTGTTCTATATGTCGATCAACATCGGCTCGTTGATAGCGTTATCGCTGGCCCCTGTGATCGCTGATAGATTCGGTTATTCAGTCACCTACAACCTGTGCGGGGCGGGGTTAATTATCGCATTACTGGTTTACATCGCCTGTCGTGGAATGGTGAAAGACATTGGTTCTGAACCCGACTTCCGGCCAATGAGCTTCAGCAAACTGTTGTACGTGTTACTTGGCAGCGTGGTGATGATCTTCGTATGCGCATGGCTGATGCACAACGTAGAAGTCGCCAATCTGGTGCTGATTGTTCTCTCCATCGTCGTCACCATCATCTTCTTTCGTCAGGCATTCAAGCTGGATAAAACCGGGCGCAATAAAATGTTTGTCGCCTTTGTCCTGATGCTCGAAGCGGTGGTGTTTTACATTCTCTACGCCCAGATGCCAACATCGCTGAACTTCTTTGCCATCAACAACGTGCATCATGAAATTCTCGGTTTTTCCATCAACCCGGTCAGCTTCCAGGCGCTTAACCCGTTCTGGGTGGTACTCGCCAGCCCAATACTGGCAGGCATTTACACGCATCTGGGTAACAAAGGCAAAGACCTCTCGATGCCGATGAAATTTACTCTCGGCATGTTTATGTGCTCACTGGGCTTTTTGACGGCGGCAGCTGCGGGAATGTGGTTTGCGGATGCACAAGGGCTGACATCGCCATGGTTTATCGTGCTGGTGTACTTATTCCAGAGCTTAGGTGAACTGTTTATTAGCGCCCTTGGCCTGGCGATGATTGCTGCCCTGGTGCCGCAGCATTTGATGGGCTTTATTCTCGGGATGTGGTTCCTGACGCAGGCTGCCGCGTTCTTGCTGGGCGGCTATGTGGCAACATTTACCGCGGTGCCGGACAACATTACCGATCCGCTTGAGACGTTGCCCGTCTATACCAACGTGTTTGGTAAGATTGGTCTGGTCACGCTGGGCGTTGCAGTAGTGATGCTGTTGATGGTGCCGTGGCTGAAACGCATGATTGCGACGCCGGAAAGCCATTAA", - "dna_sequence_length": 1470, - "functions": [ - "dipeptide and tripeptide permease B" - ], - "id": "CDS_3432", - "location": [ - [ - "NC_000913", - 3640862, - "+", - 1470 - ] - ], - "md5": "56841cac3d7df65d7f262843727624fa", - "parent_gene": "", - "protein_md5": "d21f567ec6a15c020f7adcc23a64e978", - "protein_translation": "MNTTTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQLGFSQEQAFVTFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIALSLAPVIADRFGYSVTYNLCGAGLIIALLVYIACRGMVKDIGSEPDFRPMSFSKLLYVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFRQAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVLASPILAGIYTHLGNKGKDLSMPMKFTLGMFMCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMLLMVPWLKRMIATPESH", - "protein_translation_length": 489, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3482" - ], - [ - "gene_synonym", - "rsmJ" - ], - [ - "gene_synonym", - "GI:16131369" - ], - [ - "gene_synonym", - "EcoGene:EG12233" - ], - [ - "gene_synonym", - "yhiQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0011419" - ], - [ - "gene_synonym", - "GeneID:948005" - ], - [ - "gene_synonym", - "b3497" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68567" - ], - [ - "gene_synonym", - "JW5672" - ], - [ - "gene_synonym", - "NP_417954.1" - ] - ], - "dna_sequence": "GTGAAAATCTGCTTAATTGATGAAACAGGCACCGGAGACGGTGCCTTATCTGTTCTGGCGGCCCGCTGGGGGCTGGAGCACGATGAAGACAACCTGATGGCGCTGGTGTTAACGCCGGAACATCTGGAATTGCGCAAGCGTGATGAGCCAAAACTTGGCGGCATCTTTGTTGATTTTGTTGGCGGAGCGATGGCGCACCGACGCAAATTCGGCGGTGGTCGCGGTGAGGCGGTGGCGAAAGCGGTGGGCATTAAAGGCGATTATTTGCCGGATGTGGTGGATGCCACTGCAGGACTTGGGCGCGATGCCTTTGTACTGGCTTCAGTCGGCTGCCGCGTGCGGATGCTGGAGCGTAATCCAGTGGTTGCCGCGCTACTCGACGACGGCCTGGCGCGTGGTTATGCGGATGCGGAAATCGGCGGCTGGTTGCAGGAGCGGTTGCAGTTAATTCACGCCTCCAGCCTGACGGCGCTGACTGATATTACCCCGCGCCCGCAGGTGGTTTATCTCGACCCGATGTTCCCGCATAAGCAGAAAAGCGCGCTAGTGAAAAAAGAGATGCGTGTCTTTCAGTCGCTGGTGGGACCGGATCTTGATGCCGATGGATTACTGGAGCCTGCACGCTTGCTGGCGACCAAACGCGTGGTGGTAAAGCGCCCGGACTACGCGCCACCGCTGGCGAATGTCGCCACGCCAAACGCGGTAGTCACTAAAGGGCATCGCTTTGATATCTATGCAGGTACGCCAGTGTAA", - "dna_sequence_length": 753, - "functions": [ - "16S rRNA m(2)G1516 methyltransferase, SAM-dependent" - ], - "id": "CDS_3433", - "location": [ - [ - "NC_000913", - 3643132, - "-", - 753 - ] - ], - "md5": "316c9a07b0e57568b6a725414a03ca69", - "parent_gene": "", - "protein_md5": "9d09691ceae35d2290c48298e959323d", - "protein_translation": "MKICLIDETGTGDGALSVLAARWGLEHDEDNLMALVLTPEHLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGHRFDIYAGTPV", - "protein_translation_length": 250, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3483" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27298" - ], - [ - "gene_synonym", - "JW3465" - ], - [ - "gene_synonym", - "ASAP:ABE-0011421" - ], - [ - "gene_synonym", - "EcoGene:EG11441" - ], - [ - "gene_synonym", - "GI:16131370" - ], - [ - "gene_synonym", - "NP_417955.1" - ], - [ - "gene_synonym", - "b3498" - ], - [ - "gene_synonym", - "prlC" - ], - [ - "gene_synonym", - "opdA" - ], - [ - "gene_synonym", - "GeneID:948016" - ] - ], - "dna_sequence": "ATGACGAATCCGTTACTGACTCCCTTTGAATTGCCTCCGTTTTCTAAAATTCTCCCGGAACATGTCGTTCCAGCCGTGACTAAGGCATTGAACGACTGCCGCGAAAACGTGGAGCGCGTAGTAGCGCAAGGGGCACCGTACACCTGGGAAAATCTCTGCCAGCCGCTGGCGGAAGTGGACGATGTGTTGGGGCGTATCTTCTCCCCGGTCAGCCACCTGAACTCGGTGAAAAATAGCCCGGAACTGCGTGAAGCCTACGAACAAACCCTGCCGCTGCTGTCGGAATACAGCACCTGGGTAGGGCAACATGAAGGGCTGTATAAAGCGTATCGCGACCTGCGCGATGGCGATCATTACGCCACGCTGAACACGGCGCAGAAGAAAGCGGTTGATAACGCACTGCGCGACTTTGAACTCTCTGGCATAGGTCTGCCGAAAGAGAAACAGCAGCGTTACGGCGAAATTGCGACCCGTCTTTCTGAACTGGGCAACCAGTACAGCAACAACGTCCTCGATGCGACAATGGGCTGGACCAAACTCGTTACCGACGAAGCGGAGCTGGCGGGGATGCCAGAAAGCGCGCTGGCTGCGGCAAAAGCCCAGGCCGAAGCGAAAGAGCTGGAAGGTTATTTGCTGACGCTGGATATCCCAAGCTACTTGCCGGTAATGACCTACTGCGACAACCAGGCTCTGCGTGAAGAGATGTATCGCGCTTACAGCACCCGCGCCTCCGATCAAGGCCCAAACGCCGGTAAATGGGATAACAGCAAGGTGATGGAAGAGATCCTCGCGCTGCGTCACGAACTGGCGCAACTGCTGGGCTTTGAAAACTACGCCTTTAAATCCCTTGCCACTAAAATGGCAGAAAACCCGCAGCAGGTGCTGGATTTCTTAACCGATCTGGCAAAACGCGCGCGTCCACAAGGCGAAAAAGAGCTGGCGCAATTGCGTGCCTTTGCCAAAGCCGAATTTGGCGTCGATGAGTTGCAGCCGTGGGATATCGCTTACTACAGCGAAAAACAAAAACAGCACCTCTACAGCATCAGTGACGAACAGCTGCGTCCGTACTTCCCGGAAAACAAAGCGGTTAACGGCCTGTTTGAAGTGGTTAAGCGTATTTACGGCATCACCGCTAAAGAGCGTAAAGATGTTGATGTCTGGCATCCGGATGTACGTTTCTTCGAACTGTATGACGAAAATAACGAACTGCGCGGTAGCTTCTACCTCGATCTGTATGCCCGTGAAAACAAGCGCGGCGGGGCGTGGATGGATGACTGCGTAGGCCAGATGCGTAAAGCTGATGGTTCTTTGCAAAAACCGGTCGCGTATTTGACTTGTAACTTCAACCGCCCGGTAAATGGTAAACCGGCGCTGTTCACTCACGACGAAGTGATCACCCTCTTCCACGAGTTCGGTCACGGCCTGCACCATATGCTGACCCGCATCGAAACCGCTGGTGTTTCCGGTATCAGCGGTGTGCCGTGGGATGCGGTCGAACTGCCGAGTCAGTTTATGGAAAACTGGTGCTGGGAGCCGGAGGCGCTGGCGTTTATCTCTGGTCACTATGAAACCGGCGAACCGCTGCCGAAAGAGTTGCTGGATAAAATGCTGGCGGCGAAGAACTACCAGGCGGCGCTGTTTATTCTGCGTCAGCTGGAGTTCGGCCTGTTTGATTTCCGCCTTCATGCCGAGTTCCGCCCGGATCAGGGGGCAAAAATCCTCGAAACTCTGGCAGAAATCAAGAAACTGGTTGCCGTGGTGCCATCTCCGTCCTGGGGCCGTTTCCCGCACGCTTTCAGCCATATTTTCGCCGGTGGTTATGCCGCAGGTTACTACAGCTACCTGTGGGCTGACGTACTGGCGGCAGATGCTTTCTCGCGCTTTGAGGAAGAGGGCATTTTCAACCGTGAAACCGGGCAGTCGTTCCTCGACAACATTCTGAGCCGTGGCGGTTCAGAAGAGCCGATGGATCTGTTCAAACGCTTCCGTGGTCGTGAACCGCAGCTGGATGCGATGCTGGAGCATTACGGCATTAAGGGCTGA", - "dna_sequence_length": 2043, - "functions": [ - "oligopeptidase A" - ], - "id": "CDS_3434", - "location": [ - [ - "NC_000913", - 3645182, - "-", - 2043 - ] - ], - "md5": "260c409e7998cf9833311151d64495fd", - "parent_gene": "", - "protein_md5": "5a887edb44abee1a78c5115a9fa91f79", - "protein_translation": "MTNPLLTPFELPPFSKILPEHVVPAVTKALNDCRENVERVVAQGAPYTWENLCQPLAEVDDVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQHEGLYKAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLSELGNQYSNNVLDATMGWTKLVTDEAELAGMPESALAAAKAQAEAKELEGYLLTLDIPSYLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFENYAFKSLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVDELQPWDIAYYSEKQKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERKDVDVWHPDVRFFELYDENNELRGSFYLDLYARENKRGGAWMDDCVGQMRKADGSLQKPVAYLTCNFNRPVNGKPALFTHDEVITLFHEFGHGLHHMLTRIETAGVSGISGVPWDAVELPSQFMENWCWEPEALAFISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFRPDQGAKILETLAEIKKLVAVVPSPSWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADAFSRFEEEGIFNRETGQSFLDNILSRGGSEEPMDLFKRFRGREPQLDAMLEHYGIKG", - "protein_translation_length": 680, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011428" - ], - [ - "gene_synonym", - "GeneID:948012" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37634" - ], - [ - "gene_synonym", - "ECK3484" - ], - [ - "gene_synonym", - "JW3466" - ], - [ - "gene_synonym", - "rlmJ" - ], - [ - "gene_synonym", - "EcoGene:EG12234" - ], - [ - "gene_synonym", - "GI:16131371" - ], - [ - "gene_synonym", - "NP_417956.1" - ], - [ - "gene_synonym", - "b3499" - ], - [ - "gene_synonym", - "yhiR" - ] - ], - "dna_sequence": "ATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGCCGACGTCCTTAAACATACCGTTCAGAGCCTGATCATCGAGTCGCTGAAAGAGAAAGATAAACCGTTTCTCTATCTCGACACCCACGCAGGGGCCGGGCGTTATCAGTTAGGCAGCGAACATGCCGAGCGTACCGGCGAATATCTCGAAGGCATCGCCCGTATCTGGCAGCAGGACGATTTGCCCGCAGAACTGGAGGCGTACATCAATGTGGTAAAACACTTCAACCGTAGCGGTCAGTTGCGTTACTACCCCGGTTCGCCGTTGATTGCTCGCCTGCTACTGCGTGAACAGGACAGCCTGCAACTGACCGAACTGCACCCGAGCGATTACCCGTTGTTGCGTTCTGAATTTCAGAAAGATAGCCGTGCGCGTGTCGAAAAAGCCGACGGTTTCCAGCAGCTTAAGGCCAAACTGCCGCCGGTTTCCCGCCGTGGTTTAATCCTTATCGACCCGCCGTATGAAATGAAAACTGACTATCAAGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTTCGCCACTGGTATTTACGCACTGTGGTATCCGGTGGTGCTGCGTCAGCAAATTAAGCGCATGATCCACGATCTGGAAGCGACCGGTATTCGCAAAATTCTGCAAATTGAACTGGCGGTACTGCCAGACAGCGATCGCCGTGGCATGACCGCTTCCGGCATGATTGTGATTAACCCGCCGTGGAAACTGGAACAACAGATGAATAACGTGCTGCCGTGGCTGCACAGCAAACTGGTTCCGGCAGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCGGAGTAA", - "dna_sequence_length": 843, - "functions": [ - "23S rRNA m(6)A2030 methyltransferase, SAM-dependent" - ], - "id": "CDS_3435", - "location": [ - [ - "NC_000913", - 3645385, - "+", - 843 - ] - ], - "md5": "2ca8f7677ea091a9d41701abb2c81896", - "parent_gene": "", - "protein_md5": "84a56d8720671ad41ff950ee3ffc42e6", - "protein_translation": "MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARLLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGIAEGYKRFATGIYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE", - "protein_translation_length": 280, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417957.1" - ], - [ - "gene_synonym", - "ECK3485" - ], - [ - "gene_synonym", - "JW3467" - ], - [ - "gene_synonym", - "ASAP:ABE-0011432" - ], - [ - "gene_synonym", - "GeneID:948014" - ], - [ - "gene_synonym", - "GI:16131372" - ], - [ - "gene_synonym", - "gorA" - ], - [ - "gene_synonym", - "gor" - ], - [ - "gene_synonym", - "EcoGene:EG10412" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06715" - ], - [ - "gene_synonym", - "b3500" - ] - ], - "dna_sequence": "ATGACTAAACACTATGATTACATCGCCATCGGCGGCGGCAGCGGCGGTATCGCCTCCATCAACCGCGCGGCTATGTACGGCCAGAAATGTGCGCTGATTGAAGCCAAAGAGCTGGGCGGCACCTGCGTAAATGTTGGCTGTGTGCCGAAAAAAGTGATGTGGCACGCGGCGCAAATCCGTGAAGCGATCCATATGTACGGCCCGGATTATGGTTTTGATACCACTATCAATAAATTCAACTGGGAAACGTTGATCGCCAGCCGTACCGCCTATATCGACCGTATTCATACTTCCTATGAAAACGTGCTCGGTAAAAATAACGTTGATGTAATCAAAGGCTTTGCCCGCTTCGTTGATGCCAAAACGCTGGAGGTAAACGGCGAAACCATCACGGCCGATCATATTCTGATCGCCACAGGCGGTCGTCCGAGCCACCCGGATATTCCGGGCGTGGAATACGGTATTGATTCTGATGGCTTCTTCGCCCTTCCTGCTTTGCCAGAGCGCGTGGCGGTTGTTGGCGCGGGTTACATCGCCGTTGAGCTGGCGGGCGTGATTAACGGCCTCGGCGCGAAAACGCATCTGTTTGTGCGTAAACATGCGCCGCTGCGCAGCTTCGACCCGATGATTTCCGAAACGCTGGTCGAAGTGATGAACGCCGAAGGCCCGCAGCTGCACACCAACGCCATCCCGAAAGCGGTAGTGAAAAATACCGATGGTAGCCTGACGCTGGAGCTGGAAGATGGTCGCAGTGAAACGGTGGATTGCCTGATTTGGGCGATTGGTCGCGAGCCTGCCAATGACAACATCAACCTGGAAGCCGCTGGCGTTAAAACTAACGAAAAAGGCTATATCGTCGTCGATAAATATCAAAACACCAATATTGAAGGTATTTACGCGGTGGGCGATAACACGGGTGCAGTGGAGCTGACACCGGTGGCAGTTGCAGCGGGTCGCCGTCTCTCTGAACGCCTGTTTAATAACAAGCCGGATGAGCATCTGGATTACAGCAACATTCCGACCGTGGTCTTCAGCCATCCGCCGATTGGTACTGTTGGTTTAACGGAACCGCAGGCGCGCGAGCAGTATGGCGACGATCAGGTGAAAGTGTATAAATCCTCTTTCACCGCGATGTATACCGCCGTCACCACTCACCGCCAGCCGTGCCGCATGAAGCTGGTGTGCGTTGGATCGGAAGAGAAGATTGTCGGTATTCACGGCATTGGCTTTGGTATGGACGAAATGTTGCAGGGCTTCGCGGTGGCGCTGAAGATGGGGGCAACCAAAAAAGACTTCGACAATACCGTCGCCATTCACCCAACGGCGGCAGAAGAGTTCGTGACAATGCGTTAA", - "dna_sequence_length": 1353, - "functions": [ - "glutathione oxidoreductase" - ], - "id": "CDS_3436", - "location": [ - [ - "NC_000913", - 3646299, - "+", - 1353 - ] - ], - "md5": "19cb6208cc69855bc675047db5f33cb5", - "parent_gene": "", - "protein_md5": "89ded29143484f8dbe4356e42b9311d0", - "protein_translation": "MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGFFALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNNKPDEHLDYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR", - "protein_translation_length": 450, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:A5A624" - ], - [ - "gene_synonym", - "b4613" - ], - [ - "gene_synonym", - "GI:635341466" - ], - [ - "gene_synonym", - "GeneID:5061522" - ], - [ - "gene_synonym", - "YP_001165328.2" - ], - [ - "gene_synonym", - "dinQ" - ], - [ - "gene_synonym", - "ECK4422" - ], - [ - "gene_synonym", - "EcoGene:EG14431" - ] - ], - "dna_sequence": "GTGATTGATAAAGCAATCATCGTTCTAGGGGCGTTAATTGCGCTGCTGGAACTGATCCGCTTTCTGCTTCAGCTTCTGAACTGA", - "dna_sequence_length": 84, - "functions": [ - "UV-inducible membrane toxin, DinQ-AgrB type I toxin-antitoxin system" - ], - "id": "CDS_3437", - "location": [ - [ - "NC_000913", - 3647788, - "-", - 84 - ] - ], - "md5": "ffaaaf77873c183f6a1d5a1f13ceb8ae", - "parent_gene": "", - "protein_md5": "c6655d86ee13e6d8fd2bd0b0b54aef9d", - "protein_translation": "MIDKAIIVLGALIALLELIRFLLQLLN", - "protein_translation_length": 27, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948013" - ], - [ - "gene_synonym", - "arsE" - ], - [ - "gene_synonym", - "NP_417958.1" - ], - [ - "gene_synonym", - "ECK3486" - ], - [ - "gene_synonym", - "JW3468" - ], - [ - "gene_synonym", - "GI:16131373" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37309" - ], - [ - "gene_synonym", - "ASAP:ABE-0011435" - ], - [ - "gene_synonym", - "arsR" - ], - [ - "gene_synonym", - "EcoGene:EG12235" - ], - [ - "gene_synonym", - "b3501" - ] - ], - "dna_sequence": "ATGTCATTTCTGTTACCCATCCAATTGTTCAAAATTCTTGCTGATGAAACCCGTCTGGGCATCGTTTTACTGCTCAGCGAACTGGGAGAGTTATGCGTCTGCGATCTCTGCACTGCTCTCGACCAGTCGCAGCCCAAGATCTCCCGCCACCTGGCATTGCTGCGTGAAAGCGGGCTATTGCTGGACCGCAAGCAAGGTAAGTGGGTTCATTACCGCTTATCACCGCATATTCCAGCATGGGCGGCGAAAATTATTGATGAGGCCTGGCGATGTGAACAGGAAAAGGTTCAGGCGATTGTCCGCAACCTGGCTCGACAAAACTGTTCCGGGGACAGTAAGAACATTTGCAGTTAA", - "dna_sequence_length": 354, - "functions": [ - "arsenical resistance operon transcriptional repressor", - "autorepressor" - ], - "id": "CDS_3438", - "location": [ - [ - "NC_000913", - 3648528, - "+", - 354 - ] - ], - "md5": "d68b457349c1336f485c57ccadb55966", - "parent_gene": "", - "protein_md5": "5476ba71ab630fd81d8d88f6bc00a531", - "protein_translation": "MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKVQAIVRNLARQNCSGDSKNICS", - "protein_translation_length": 117, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB93" - ], - [ - "gene_synonym", - "arsF" - ], - [ - "gene_synonym", - "NP_417959.4" - ], - [ - "gene_synonym", - "arsB" - ], - [ - "gene_synonym", - "ECK3487" - ], - [ - "gene_synonym", - "JW3469" - ], - [ - "gene_synonym", - "EcoGene:EG12236" - ], - [ - "gene_synonym", - "ASAP:ABE-0011437" - ], - [ - "gene_synonym", - "GeneID:948011" - ], - [ - "gene_synonym", - "GI:90111602" - ], - [ - "gene_synonym", - "b3502" - ] - ], - "dna_sequence": "ATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATCGTATTGGTTATCTGGCAGCCGAAAGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCCGGGTGATATTCCGGTGGTGTGGAATATCGTCTGGAACGCGACGGCTGCGTTTATCGCCGTCATTATCATCAGCCTGCTGCTGGATGAGTCCGGCTTTTTTGAATGGGCGGCGCTGCACGTCTCACGCTGGGGTAATGGTCGTGGTCGCTTGCTGTTTACCTGGATTGTCCTGCTCGGTGCTGCCGTTGCCGCCCTGTTTGCCAATGATGGCGCGGCGCTTATTTTGACACCGATTGTCATCGCCATGCTGCTGGCTTTAGGGTTCAGTAAAGGCACTACGCTGGCGTTCGTGATGGCGGCCGGATTCATTGCCGATACCGCCAGCCTGCCGCTTATTGTCTCCAACCTGGTGAATATCGTTTCCGCTGATTTCTTTGGCCTCGGCTTTCGCGAATACGCCTCGGTGATGGTGCCGGTGGATATCGCCGCGATTGTTGCCACGCTGGTGATGTTACATCTCTATTTTCGCAAAGATATTCCGCAGAACTACGATATGGCGCTGCTGAAATCTCCCGCAGAAGCGATCAAAGATCCTGCTACGTTCAAAACTGGCTGGGTTGTTTTACTGCTTCTGCTGGTGGGATTTTTCGTCCTGGAACCGCTCGGCATTCCGGTGAGCGCCATTGCAGCTGTGGGCGCGCTGATATTATTTGTCGTCGCTAAACGCGGTCATGCGATTAATACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGTACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGTCCATTGATGGCAGCACGGCATCTGGCGTTATCAAAGAAGCGATGGTTTATGCCAATGTGATTGGCTGCGATTTGGGACCGAAAATTACCCCAATTGGTAGCCTGGCTACGCTACTCTGGCTGCACGTACTTTCGCAGAAGAATATGACTATCAGCTGGGGATATTACTTCCGTACAGGGATTATCATGACCCTGCCTGTGCTGTTTGTGACGCTGGCTGCGCTGGCGCTACGTCTCTCTTTCACTTTGTAA", 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"arsC" - ], - [ - "gene_synonym", - "GI:16131375" - ], - [ - "gene_synonym", - "ECK3488" - ], - [ - "gene_synonym", - "EcoGene:EG12237" - ], - [ - "gene_synonym", - "GeneID:948018" - ], - [ - "gene_synonym", - "JW3470" - ], - [ - "gene_synonym", - "NP_417960.1" - ], - [ - "gene_synonym", - "b3503" - ] - ], - "dna_sequence": "ATGAGCAACATTACCATTTATCACAACCCGGCCTGCGGCACGTCGCGTAATACGCTGGAGATGATCCGCAACAGCGGCACAGAACCGACTATTATCCATTATCTGGAAACTCCGCCAACGCGCGATGAACTGGTCAAACTCATTGCCGATATGGGGATTTCCGTACGCGCGCTGCTGCGTAAAAACGTCGAACCGTATGAGGAGCTGGGCCTTGCGGAAGATAAATTTACTGACGATCGGTTAATCGACTTTATGCTTCAGCACCCGATTCTGATTAATCGCCCGATTGTGGTGACGCCGCTGGGAACTCGCCTGTGCCGCCCTTCAGAAGTGGTGCTGGAAATTCTGCCAGATGCGCAAAAAGGCGCATTCTCCAAGGAAGATGGCGAGAAAGTGGTTGATGAAGCGGGTAAGCGCCTGAAATAA", - "dna_sequence_length": 426, - "functions": [ - "arsenate reductase" - ], - "id": "CDS_3440", - "location": [ - [ - "NC_000913", - 3650237, - "+", - 426 - ] - ], - "md5": "8710eb2ef46ea7771918edff7e67d853", - "parent_gene": "", - "protein_md5": "3b0fb4d862f55919da7d85a871902311", - "protein_translation": "MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIHYLETPPTRDELVKLIADMGISVRALLRKNVEPYEELGLAEDKFTDDRLIDFMLQHPILINRPIVVTPLGTRLCRPSEVVLEILPDAQKGAFSKEDGEKVVDEAGKRLK", - "protein_translation_length": 141, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948017" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37635" - ], - [ - "gene_synonym", - "ECK3489" - ], - [ - "gene_synonym", - "JW3471" - ], - [ - "gene_synonym", - "yhiS" - ], - [ - "gene_synonym", - "ASAP:ABE-0011443" - ], - [ - "gene_synonym", - "b3504" - ], - [ - "gene_synonym", - "EcoGene:EG12238" - ] - ], - "dna_sequence": "ATGTCAATTGACTTTACCCCAGGTATAATAAATACATATCACGGCGATATTTATAACTGCACAACAAATACCGATAATGCTAAAACGCCAGACACACCGAAGTGGCCTTGCGATAATTGGGAAGAACAACAACCCATTAATTCCACATTCTCTGGAGAAGGATATATCTCTGATCAATATGATTTAGCGCAACACCAACTTCAACAAATTAATGCGTGCCACACGAACACTACATATACAAATGCAGACTACTCAAAAGTTGTGGCTCAACTTGTAAGTCTTATTACTAACATTGAAACGATAAGTTCGACACAACTTACGCAACAGACACAATCAATACTTAATCAGATTAATAACATTAGATATGAAAAAAACAAAAGTGCTGAATGTCGAATCATTGTTATCGCTAATCCTAAACCCGACAAGGCAATCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGAAGTTATATATTGAGCACAGTGAAAATAAAAACAGGATGAAAGTCTTTGCCGGAACCAACTTTATTGATTTCAATATGACAGGACAGAACCTGTCCGGGTTCGTTCTAACCTTGTCAAGGTTTTATTTCGAAGATCTACTTAATATAAATTTCACTGACGCAAATTTAGGTGACACTATTTTTTTACATAAAGAACACCCTACCCCCAAATTATATAAAGATGGACAATATCTTGACAAACAAATCGAAGGTTTATTTTCAACATTATTAACCATTAATGACAACCTTTTACGAGCAAAAGCGGAAATTGCTTCGACAATAATTAAATTTTTAGAGGCCAGGATAACCAATCTTTCATACAATGACATATTAAAATATCAGCAAGAATTCCAAAGACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAAAATTCAAACATGGGCAGAAATGTCTGAATATCAATTCGAAGTATTTCAATACGAGACGCTTAACCCAAAAAAAATGTCACACACGCCTTATTTAAAGAGGCCACTGCCTAATGAAAAAGATATAAATTATGGGGTGGAAATAGAAATACCATCTGGTAAAAGAATTCGCTTATCAAATCATTACCAGAATATAATACCATAA", 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"insH1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CE58" - ], - [ - "gene_synonym", - "b3505" - ], - [ - "gene_synonym", - "ASAP:ABE-0011446" - ], - [ - "gene_synonym", - "ECK0261" - ] - ], - "dna_sequence": "ATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAGCCGTTTTACCCCAAGGCTGGTAATGGCCGGCGACCTTATCCGCTGGAAACCATGCTACGCATTCACTGCATGCAGCATTGGTACAACCTGAGCGATGGCGCGATGGAAGATGCTCTGTACGAAATCGCCTCCATGCGTCTGTTTGCCCGGTTATCCCTGGATAGCGCCTTGCCGGACCGCACCACCATCATGAATTTCCGCCACCTGCTGGAGCAGCATCAACTGGCCCGCCAATTGTTCAAGACCATCAATCGCTGGCTGGCCGAAGCAGGCGTCATGATGACTCAAGGCACCTTGGTCGATGCCACCATCATTGAGGCACCCAGCTCGACCAAGAACAAAGAGCAGCAACGCGATCCGGAGATGCATCAGACCAAGAAAGGCAATCAGTGGCACTTTGGCATGAAGGCCCACATTGGTGTCGATGCCAAGAGTGGCCTGACCCACAGCCTGGTCACCACCGCGGCCAACGAGCATGACCTCAATCAGCTGGGTAATCTGCTGCATGGAGAGGAGCAATTTGTCTCAGCCGATGCCGGCTACCAAGGGGCGCCACAGCGCGAGGAGCTGGCCGAGGTGGATGTGGACTGGCTGATCGCCGAGCGCCCCGGCAAGGTAAGAACCTTGAAACAGCATCCACGCAAGAACAAAACGGCCATCAACATCGAATACATGAAAGCCAGCATCCGGGCCAGGGTGGAGCACCCATTTCGCATCATCAAGCGACAGTTCGGCTTCGTGAAAGCCAGATACAAGGGGTTGCTGAAAAACGATAACCAACTGGCGATGTTATTCACGCTGGCCAACCTGTTTCGGGCGGACCAAATGATACGTCAGTGGGAGAGATCTCACTAA", 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"ECK3490" - ], - [ - "gene_synonym", - "NP_417963.4" - ], - [ - "gene_synonym", - "b3506" - ], - [ - "gene_synonym", - "GI:90111603" - ], - [ - "gene_synonym", - "ASAP:ABE-0011451" - ] - ], - "dna_sequence": "ATGAACATGACAAAAGGTGCACTCATCCTCAGCCTTTCATTTTTGCTTGCCGCATGTAGTTCAATTCCGCAAAATATCAAAGGCAATAACCAACCTGATATTCAAAAAAGTTTTGTTGCTGTTCATAACCAGCCGGGGTTATATGTTGGTCAACAAGCGCGCTTTGGTGGGAAGGTTATCAACGTTATCAATGGCAAAACGGATACGTTGTTAGAAATCTCTGTATTACCGTTGGATAGCTATGCGAAGCCTGATATTGAAGCCAACTATCAGGGCCGACTGCTCGCCAGACAAAGCGGCTTCCTTGATCCAGTGAACTATCGTAATCACTTTGTTACCATCCTCGGCACCATTCAGGGTGAACAACCTGGCTTTATCAATAAAGTCCCGTATAACTTCCTGGAAGTGAATATGCAGGGCATCCAGGTGTGGCATTTGAGAGAAGTGGTTAATACCACCTATAACCTGTGGGATTACGGCTATGGTGCATTCTGGCCGGAACCGGGCTGGGGTGCGCCTTACTACACCAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAA", - "dna_sequence_length": 567, - "functions": [ - "outer membrane lipoprotein" - ], - "id": "CDS_3443", - "location": [ - [ - "NC_000913", - 3653961, - "+", - 567 - ] - ], - "md5": "53411361fa2112f127a8c2334a9a0ecc", - 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"ATGTTTCTTATAATTACCAGGGATACGATGTTCTTCACCGCGATGAAAAACATTCTGAGTAAAGGTAATGTCGTTCATATACAGAACGAAGAAGAGATCGACGTAATGTTGCATCAGAATGCCTTCGTCATTATTGATACATTAATGAATAATGTATTTCATTCTAATTTTCTCACTCAAATTGAACGATTAAAACCTGTCCATGTCATTATTTTCTCCCCCTTTAATATTAAACGCTGCCTGGGGAAAGTGCCGGTGACCTTTGTTCCGCGGACTATCACTATCATTGATTTTGTCGCACTCATCAATGGCAGTTACTGCTCTGTGCCTGAAGCGGCTGTGTCACTTTCGCGCAAGCAACATCAGGTTCTGAGCTGCATTGCGAATCAAATGACAACGGAAGATATTCTGGAGAAACTGAAAATATCGCTAAAAACGTTCTACTGCCATAAACACAATATCATGATGATCCTCAATCTTAAGCGGATCAATGAGCTGGTACGCCATCAGCATATTGATTATCTGGTGTGA", - "dna_sequence_length": 531, - "functions": [ - "Putative LuxR family repressor for dicarboxylate transport" - ], - "id": "CDS_3444", - "location": [ - [ - "NC_000913", - 3654683, - "+", - 531 - ] - ], - "md5": "60b69e2db7f852d0ff29ff51d53a3621", - "parent_gene": "", - "protein_md5": "789c1488e68dfefde0f2caf41c3e34bd", - "protein_translation": "MFLIITRDTMFFTAMKNILSKGNVVHIQNEEEIDVMLHQNAFVIIDTLMNNVFHSNFLTQIERLKPVHVIIFSPFNIKRCLGKVPVTFVPRTITIIDFVALINGSYCSVPEAAVSLSRKQHQVLSCIANQMTTEDILEKLKISLKTFYCHKHNIMMILNLKRINELVRHQHIDYLV", - "protein_translation_length": 176, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yhiD" - ], - [ - "gene_synonym", - "yhhE" - ], - [ - "gene_synonym", - "NP_417965.1" - ], - [ - "gene_synonym", - "GI:16131380" - ], - [ - "gene_synonym", - "GeneID:948019" - ], - [ - "gene_synonym", - "EcoGene:EG11400" - ], - [ - "gene_synonym", - "ECK3492" - ], - [ - "gene_synonym", - "b3508" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFV2" - ], - [ - "gene_synonym", - "ASAP:ABE-0011456" - ], - [ - "gene_synonym", - "JW5670" - ] - ], - "dna_sequence": "ATGACAGCAGAATTTATTATACGTCTTATACTCGCGGCAATTGCCTGTGGCGCTATTGGCATGGAAAGGCAAATGCGCGGCAAAGGAGCAGGGTTACGCACACATGTATTAATTGGCATGGGAAGCGCCCTGTTTATGATTGTTTCGAAATATGGTTTTGCTGACGTGCTGTCTTTAGATCACGTCGGACTCGACCCCAGCCGTATTGCTGCTCAGGTGGTGACGGGCGTCGGGTTTATCGGTGCAGGTAACATTCTCGTTCGTAACCAAAATATTGTAGGTCTGACGACGGCAGCGGATATCTGGGTGACCGCCGCCATAGGTATGGTTATTGGCAGCGGTATGTACGAACTGGGTATTTATGGTTCAGTGATGACCTTGTTGGTGCTGGAAGTCTTCCATCAATTAACCTTCCGCCTGATGAACAAAAATTACCATTTACAGCTGACATTAGTGAACGGTAATACGGTATCAATGCTCGACTGGTTTAAGCAGCAAAAAATAAAAACTGATTTAGTTTCGTTGCAGGAAAATGAAGATCATGAAGTGGTCGCCATTGATATCCAGCTTCATGCCACAACGTCGATAGAAGACCTGTTGCGATTATTAAAAGGTATGGCAGGGGTGAAAGGCGTTTCAATTAGCTAA", - "dna_sequence_length": 648, - "functions": [ - "putative Mg(2+) transport ATPase, inner membrane protein" - ], - "id": "CDS_3445", - "location": [ - [ - "NC_000913", - 3655902, - "-", - 648 - ] - ], - "md5": "be2da3ad494f8f909ef4f92a77526588", - "parent_gene": "", - "protein_md5": "61db44ead7d92cfa989ac478e06fc1d5", - "protein_translation": "MTAEFIIRLILAAIACGAIGMERQMRGKGAGLRTHVLIGMGSALFMIVSKYGFADVLSLDHVGLDPSRIAAQVVTGVGFIGAGNILVRNQNIVGLTTAADIWVTAAIGMVIGSGMYELGIYGSVMTLLVLEVFHQLTFRLMNKNYHLQLTLVNGNTVSMLDWFKQQKIKTDLVSLQENEDHEVVAIDIQLHATTSIEDLLRLLKGMAGVKGVSIS", - "protein_translation_length": 215, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948026" - ], - [ - "gene_synonym", - "yhhD" - ], - [ - "gene_synonym", - "yhiC" - ], - [ - "gene_synonym", - "GI:162135912" - ], - [ - "gene_synonym", - "ECK3493" - ], - [ - "gene_synonym", - "NP_417966.4" - ], - [ - "gene_synonym", - "hdeB" - ], - [ - "gene_synonym", - "b3509" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AET2" - ], - [ - "gene_synonym", - "JW5669" - ], - [ - "gene_synonym", - "EcoGene:EG11399" - ], - [ - "gene_synonym", - "ASAP:ABE-0011458" - ] - ], - "dna_sequence": "ATGAATATTTCATCTCTCCGTAAAGCGTTTATTTTTATGGGCGCTGTAGCGGCTTTGTCACTGGTGAACGCACAATCTGCGTTGGCAGCCAATGAATCCGCTAAAGATATGACCTGCCAGGAATTTATTGATCTGAATCCAAAAGCAATGACCCCGGTTGCATGGTGGATGCTGCATGAAGAAACAGTATATAAAGGTGGCGATACCGTTACTTTAAATGAAACCGATCTCACTCAAATTCCTAAAGTGATCGAATACTGTAAGAAAAACCCGCAGAAAAATTTGTATACCTTCAAAAATCAAGCATCTAATGACTTGCCGAATTAA", - "dna_sequence_length": 327, - "functions": [ - "acid-resistance protein" - ], - "id": "CDS_3446", - "location": [ - [ - "NC_000913", - 3656292, - "-", - 327 - ] - ], - "md5": "26b7e6f969840011d4ebae553f30286c", - "parent_gene": "", - "protein_md5": "d2a66d40466d5cd7424eb1c172bed1e1", - "protein_translation": "MNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFIDLNPKAMTPVAWWMLHEETVYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLYTFKNQASNDLPN", - "protein_translation_length": 108, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948025" - ], - [ - "gene_synonym", - "yhhC" - ], - [ - "gene_synonym", - "yhiB" - ], - [ - "gene_synonym", - "JW3478" - ], - [ - "gene_synonym", - "ECK3494" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AES9" - ], - [ - "gene_synonym", - "GI:16131382" - ], - [ - "gene_synonym", - "ASAP:ABE-0011464" - ], - [ - "gene_synonym", - "NP_417967.1" - ], - [ - "gene_synonym", - "hdeA" - ], - [ - "gene_synonym", - "b3510" - ], - [ - "gene_synonym", - "EcoGene:EG11398" - ] - ], - "dna_sequence": "ATGAAAAAAGTATTAGGCGTTATTCTTGGTGGTCTGCTTCTTCTGCCAGTTGTGAGCAATGCAGCGGATGCGCAAAAAGCAGCTGATAACAAAAAACCGGTCAACTCCTGGACCTGTGAAGATTTCCTGGCTGTGGACGAATCCTTCCAGCCAACTGCAGTTGGTTTTGCTGAAGCGCTGAACAACAAAGATAAACCAGAAGATGCGGTTTTAGATGTTCAGGGTATTGCAACCGTAACCCCAGCTATCGTTCAGGCTTGTACTCAGGATAAACAAGCCAACTTTAAAGATAAAGTTAAAGGCGAATGGGACAAAATTAAGAAAGATATGTAA", - "dna_sequence_length": 333, - "functions": [ - "stress response protein acid-resistance protein" - ], - "id": "CDS_3447", - "location": [ - [ - "NC_000913", - 3656740, - "-", - 333 - ] - ], - "md5": "475e1e4ff8374ebd65fd9e05843b9eb7", - "parent_gene": "", - "protein_md5": "3ebfa9baa4ef7004cb2d24c105fbd7db", - "protein_translation": "MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLAVDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGEWDKIKKDM", - "protein_translation_length": 110, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948024" - ], - [ - "gene_synonym", - "yhiA" - ], - [ - "gene_synonym", - "JW3479" - ], - [ - "gene_synonym", - "EcoGene:EG11495" - ], - [ - "gene_synonym", - "ECK3495" - ], - [ - "gene_synonym", - "ASAP:ABE-0011467" - ], - [ - "gene_synonym", - "GI:16131383" - ], - [ - "gene_synonym", - "NP_417968.1" - ], - [ - "gene_synonym", - "hdeD" - ], - [ - "gene_synonym", - "b3511" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AET5" - ] - ], - "dna_sequence": "ATGTTATATATAGATAAGGCAACAATTTTGAAGTTTGATCTGGAGATGCTTAAAAAACATCGCAGAGCAATCCAGTTTATTGCCGTGCTGCTGTTTATCGTCGGGTTGCTGTGTATCAGTTTCCCGTTCGTCTCTGGCGATATTTTAAGCACAGTAGTGGGTGCATTATTAATCTGCTCGGGTATTGCGCTTATTGTCGGGTTATTCAGCAACCGCAGTCATAATTTCTGGCCGGTATTATCCGGTTTCCTCGTCGCAGTCGCCTATTTATTGATCGGCTATTTCTTCATCCGCGCACCGGAGCTGGGCATTTTTGCCATTGCGGCATTTATTGCCGGTTTGTTCTGTGTTGCAGGGGTTATTCGCCTGATGAGTTGGTATCGTCAGCGTTCAATGAAAGGCAGCTGGCTACAGCTCGTTATTGGTGTGCTGGATATCGTCATTGCCTGGATATTCCTTGGTGCAACGCCGATGGTGTCTGTAACGCTGGTTTCCACACTGGTGGGAATTGAACTGATATTTAGCGCCGCCAGCCTGTTCAGCTTCGCCAGTTTGTTCGTTAAGCAGCAATAA", - "dna_sequence_length": 573, - "functions": [ - "acid-resistance membrane protein" - ], - "id": "CDS_3448", - "location": [ - [ - "NC_000913", - 3656995, - "+", - 573 - ] - ], - "md5": "7a077e5f1fe83ba4bf55f38937655bee", - "parent_gene": "", - "protein_md5": "67a5dda29807a1312cc7bc73846e624e", - "protein_translation": "MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFVSGDILSTVVGALLICSGIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPELGIFAIAAFIAGLFCVAGVIRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVSVTLVSTLVGIELIFSAASLFSFASLFVKQQ", - "protein_translation_length": 190, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yhiE" - ], - [ - "gene_synonym", - "JW3480" - ], - [ - "gene_synonym", - "GeneID:948023" - ], - [ - "gene_synonym", - "EcoGene:EG11544" - ], - [ - "gene_synonym", - "ECK3496" - ], - [ - "gene_synonym", - "gadE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63204" - ], - [ - "gene_synonym", - "yhiT" - ], - [ - "gene_synonym", - "GI:16131384" - ], - [ - "gene_synonym", - "ASAP:ABE-0011475" - ], - [ - "gene_synonym", - "b3512" - ], - [ - "gene_synonym", - "NP_417969.1" - ] - ], - "dna_sequence": "ATGATTTTTCTCATGACGAAAGATTCTTTTCTTTTACAGGGCTTTTGGCAGTTGAAAGATAATCACGAAATGATAAAAATCAATTCCCTGTCAGAGATCAAAAAAGTAGGCAATAAACCCTTCAAGGTTATCATTGATACCTATCACAATCATATCCTTGATGAAGAAGCGATTAAATTTCTGGAGAAATTAGATGCCGAGAGAATTATTGTTTTGGCACCTTATCACATCAGTAAACTAAAAGCTAAAGCGCCTATTTATTTTGTTAGCCGCAAAGAAAGTATCAAAAATCTTCTTGAGATTACTTATGGTAAACACTTGCCCCATAAGAATTCACAATTATGTTTTTCACATAATCAGTTCAAAATTATGCAACTGATTCTGAAAAATAAAAATGAAAGCAATATCACGTCGACGCTCAATATTTCGCAACAAACATTAAAGATTCAGAAATTCAACATTATGTACAAGCTGAAACTAAGACGTATGAGCGACATCGTCACCCTGGGTATCACATCTTATTTTTAG", - "dna_sequence_length": 528, - "functions": [ - "gad regulon transcriptional activator" - ], - "id": "CDS_3449", - "location": [ - [ - "NC_000913", - 3658366, - "+", - 528 - ] - ], - "md5": "edff17cc7cd3b5e55ffb66cad3248e7a", - "parent_gene": "", - "protein_md5": "df9b74708cc1a3803391984b0597a232", - "protein_translation": "MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGITSYF", - "protein_translation_length": 175, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3481" - ], - [ - "gene_synonym", - "GeneID:948031" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37636" - ], - [ - "gene_synonym", - "yhiU" - ], - [ - "gene_synonym", - "ECK3497" - ], - [ - "gene_synonym", - "NP_417970.1" - ], - [ - "gene_synonym", - "mdtE" - ], - [ - "gene_synonym", - "GI:16131385" - ], - [ - "gene_synonym", - "b3513" - ], - [ - "gene_synonym", - "EcoGene:EG12240" - ], - [ - "gene_synonym", - "ASAP:ABE-0011478" - ] - ], - "dna_sequence": "ATGAACAGAAGAAGAAAGCTGTTAATACCGTTGTTATTCTGCGGCGCGATGCTCACCGCCTGCGATGACAAATCGGCGGAAAACGCCGCCGCCATGACGCCTGAGGTCGGTGTCGTCACACTCTCCCCCGGTTCGGTCAATGTGTTGAGCGAATTGCCCGGTAGAACCGTTCCTTATGAAGTTGCCGAGATACGTCCCCAGGTGGGCGGTATTATCATTAAACGCAACTTTATCGAAGGCGATAAAGTGAACCAGGGCGATTCGCTGTATCAGATTGATCCTGCACCTTTACAGGCCGAGCTAAACTCCGCCAAAGGCTCGCTGGCGAAAGCGCTCTCTACCGCCAGCAATGCCCGCATCACCTTTAACCGCCAGGCATCGTTGCTGAAGACCAACTACGTTAGCCGTCAGGATTACGACACCGCGCGCACCCAGTTGAATGAAGCAGAAGCCAATGTCACCGTCGCCAAAGCGGCTGTTGAACAGGCGACGATCAATCTGCAATACGCGAATGTCACCTCGCCGATTACGGGCGTCAGCGGGAAATCGTCGGTGACCGTCGGCGCACTCGTTACCGCTAATCAGGCAGATTCGCTGGTTACCGTACAACGTCTGGACCCGATTTATGTCGATCTCACGCAGTCGGTGCAAGATTTCTTACGCATGAAAGAAGAGGTCGCCAGTGGGCAAATCAAACAGGTTCAGGGCAGTACGCCAGTACAGCTCAATCTGGAAAATGGTAAACGCTACAGCCAGACCGGCACGCTGAAATTCTCCGACCCGACAGTGGATGAAACCACGGGCTCCGTGACGTTACGGGCGATTTTCCCCAACCCAAATGGTGACTTGCTGCCTGGCATGTACGTCACGGCATTAGTGGATGAAGGTAGCCGCCAGAATGTATTACTGGTGCCGCAGGAAGGCGTCACCCACAACGCCCAGGGTAAAGCAACGGCGCTCATTCTGGATAAAGACGATGTCGTGCAGCTACGCGAAATTGAAGCCAGCAAAGCCATCGGCGACCAGTGGGTCGTCACCTCTGGCTTGCAGGCTGGCGATCGGGTGATCGTTTCCGGTTTGCAACGCATTCGTCCGGGTATCAAAGCACGAGCAATTTCCTCCAGCCAGGAAAACGCCAGCACCGAATCGAAACAATAA", 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"gene_synonym", - "GI:16131386" - ], - [ - "gene_synonym", - "yhiV" - ], - [ - "gene_synonym", - "NP_417971.1" - ], - [ - "gene_synonym", - "mdtF" - ], - [ - "gene_synonym", - "ASAP:ABE-0011480" - ], - [ - "gene_synonym", - "b3514" - ], - [ - "gene_synonym", - "EcoGene:EG12241" - ] - ], - "dna_sequence": "ATGGCTAACTATTTTATTGATCGCCCGGTTTTTGCCTGGGTACTTGCCATTATTATGATGCTTGCAGGTGGTCTGGCGATCATGAACTTACCGGTTGCGCAGTATCCGCAGATTGCGCCACCGACCATTACCGTCAGCGCTACCTATCCAGGTGCCGATGCGCAAACGGTAGAAGACTCGGTCACTCAGGTGATTGAGCAAAATATGAATGGGCTTGATGGCCTGATGTACATGTCTTCAACCAGTGATGCGGCGGGCAATGCCTCTATCACTCTGACCTTCGAGACTGGGACATCTCCTGATATCGCACAGGTTCAAGTGCAAAATAAACTGCAACTCGCTATGCCTTCATTACCTGAAGCAGTGCAGCAGCAGGGGATTAGCGTCGATAAGTCGAGCAGTAATATCCTGATGGTAGCGGCGTTTATTTCTGATAACGGCAGCCTCAACCAGTACGATATCGCGGACTATGTAGCGTCTAATATCAAAGACCCGCTAAGCCGTACCGCGGGCGTTGGTAGCGTACAACTCTTTGGTTCCGAGTATGCCATGCGTATCTGGCTGGACCCGCAAAAACTCAATAAATATAACCTGGTACCTTCCGATGTTATTTCCCAGATTAAGGTGCAAAACAACCAGATTTCCGGTGGTCAACTGGGTGGCATGCCACAGGCGGCAGACCAGCAGCTAAACGCCTCGATCATTGTGCAGACGCGTCTGCAAACGCCGGAAGAATTTGGCAAAATCCTGTTGAAAGTTCAGCAAGATGGTTCGCAAGTGCTGCTGCGTGATGTCGCTCGCGTCGAACTTGGGGCGGAAGATTATTCCACCGTGGCACGCTATAACGGCAAACCTGCTGCCGGGATCGCCATCAAACTGGCTGCCGGAGCAAACGCCCTGGATACCTCGCGGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACACCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGTATCTGTTTTTGCAGAATTTCCGTGCCACAATCATCCCGACGATTGCCGTACCGGTGGTTATTCTCGGGACGTTTGCGATCTTGTCGGCGGTCGGTTTCACCATCAACACGTTGACTATGTTCGGGATGGTGCTGGCGATAGGGTTACTGGTGGATGACGCCATCGTGGTGGTGGAGAACGTCGAGCGTGTCATTGCGGAAGATAAGCTACCGCCGAAGGAAGCGACGCATAAATCGATGGGGCAGATCCAACGTGCGCTGGTCGGTATTGCCGTTGTTCTTTCCGCAGTGTTTATGCCGATGGCCTTTATGAGCGGTGCAACCGGGGAGATCTACCGCCAGTTCTCCATCACGCTGATCTCCTCCATGCTGCTTTCAGTATTTGTGGCAATGAGCCTGACCCCTGCCCTGTGCGCCACCATTCTGAAAGCCGCGCCGGAAGGCGGTCACAAACCTAACGCCCTGTTCGCACGCTTCAACACGCTGTTTGAAAAATCAACTCAACACTATACCGATAGCACCCGCTCGCTGTTGCGTTGTACCGGTCGCTACATGGTGGTCTACCTGCTGATTTGCGCCGGGATGGCGGTGCTGTTCCTGCGCACGCCGACCTCTTTCTTACCAGAAGAGGATCAGGGGGTATTTATGACCACCGCGCAGTTACCTTCCGGTGCCACCATGGTTAACACCACGAAAGTGCTGCAACAGGTGACGGATTATTATCTGACTAAAGAGAAAGATAATGTCCAGTCGGTGTTTACCGTTGGCGGCTTTGGCTTCAGCGGTCAGGGGCAAAACAACGGCCTGGCGTTTATCAGTCTCAAGCCGTGGTCTGAACGTGTCGGTGAGGAAAACTCGGTTACCGCGATCATTCAGCGGGCAATGATTGCGTTAAGCAGTATCAATAAAGCCGTCGTCTTCCCGTTCAACTTACCCGCGGTGGCTGAACTGGGTACCGCGTCAGGTTTTGATATGGAACTGCTGGACAACGGTAACCTGGGGCACGAAAAACTAACCCAGGCGCGAAACGAGCTGTTATCACTGGCAGCGCAATCACCGAATCAGGTCACCGGGGTACGCCCGAACGGCCTGGAAGATACGCCGATGTTCAAAGTGAACGTCAACGCTGCGAAAGCTGAAGCGATGGGCGTGGCGCTGTCTGATATCAACCAGACAATTTCCACCGCCTTCGGCAGCAGCTACGTGAACGACTTCCTCAACCAGGGGCGGGTGAAAAAAGTGTATGTCCAGGCAGGCACGCCGTTCCGTATGTTGCCGGATAACATCAACCAATGGTATGTACGCAACGCCTCTGGCACGATGGCACCGCTTTCTGCCTACTCGTCTACCGAATGGACCTATGGTTCACCGCGACTGGAACGCTACAACGGCATCCCGTCAATGGAGATTTTAGGTGAAGCGGCGGCCGGGAAAAGTACCGGTGACGCCATGAAATTTATGGCAGACCTGGTCGCTAAACTTCCGGCAGGCGTCGGCTACTCATGGACCGGACTATCGTATCAGGAAGCGTTATCCTCAAATCAGGCTCCTGCGCTGTATGCGATTTCACTGGTCGTGGTGTTCCTCGCCCTCGCCGCACTCTATGAGAGCTGGTCAATTCCGTTCTCGGTGATGTTGGTTGTTCCGTTAGGCGTCGTTGGCGCATTACTGGCCACCGATCTGCGCGGCTTAAGTAATGACGTCTACTTCCAGGTTGGTTTGCTGACCACCATCGGGCTTTCCGCCAAAAACGCCATCCTGATTGTCGAATTTGCCGTTGAGATGATGCAGAAAGAAGGGAAAACGCCGATAGAGGCAATCATCGAAGCGGCGCGGATGCGTTTACGCCCAATCCTGATGACCTCTCTGGCCTTTATTCTCGGCGTGCTGCCGCTGGTTATCAGTCATGGTGCCGGTTCTGGCGCGCAAAACGCGGTAGGTACCGGCGTGATGGGCGGGATGTTTGCCGCAACAGTGCTGGCAATTTACTTCGTTCCGGTCTTTTTCGTTGTAGTGGAACATCTCTTTGCCCGCTTTAAAAAAGCGTAA", - "dna_sequence_length": 3114, - "functions": [ - "anaerobic multidrug efflux transporter, ArcA-regulated" - ], - "id": "CDS_3451", - "location": [ - [ - "NC_000913", - 3660414, - "+", - 3114 - ] - ], - "md5": "8c4b2389201d9ad7dec63c36956bc859", - "parent_gene": "", - "protein_md5": "e5d2cfe417caffa915a0fa6a830e5037", - "protein_translation": "MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTITVSATYPGADAQTVEDSVTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDIAQVQVQNKLQLAMPSLPEAVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVASNIKDPLSRTAGVGSVQLFGSEYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQLGGMPQAADQQLNASIIVQTRLQTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYSTVARYNGKPAAGIAIKLAAGANALDTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIEISIQEVFKTLVEAIILVFLVMYLFLQNFRATIIPTIAVPVVILGTFAILSAVGFTINTLTMFGMVLAIGLLVDDAIVVVENVERVIAEDKLPPKEATHKSMGQIQRALVGIAVVLSAVFMPMAFMSGATGEIYRQFSITLISSMLLSVFVAMSLTPALCATILKAAPEGGHKPNALFARFNTLFEKSTQHYTDSTRSLLRCTGRYMVVYLLICAGMAVLFLRTPTSFLPEEDQGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKEKDNVQSVFTVGGFGFSGQGQNNGLAFISLKPWSERVGEENSVTAIIQRAMIALSSINKAVVFPFNLPAVAELGTASGFDMELLDNGNLGHEKLTQARNELLSLAAQSPNQVTGVRPNGLEDTPMFKVNVNAAKAEAMGVALSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRMLPDNINQWYVRNASGTMAPLSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMKFMADLVAKLPAGVGYSWTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVMLVVPLGVVGALLATDLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPIEAIIEAARMRLRPILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFVPVFFVVVEHLFARFKKA", - "protein_translation_length": 1037, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3483" - ], - [ - "gene_synonym", - "NP_417972.1" - ], - [ - "gene_synonym", - "ECK3499" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63201" - ], - [ - "gene_synonym", - "GI:16131387" - ], - [ - "gene_synonym", - "GeneID:948029" - ], - [ - "gene_synonym", - "yhiW" - ], - [ - "gene_synonym", - "ASAP:ABE-0011482" - ], - [ - "gene_synonym", - "gadW" - ], - [ - "gene_synonym", - "b3515" - ], - [ - "gene_synonym", - "EcoGene:EG12242" - ] - ], - "dna_sequence": "ATGACTCATGTCTGCTCGGTGATCCTCATTCGTCGTTCATTCGATATTTATCATGAACAGCAAAAAATATCGCTGCATAACGAGAGTATTCTGCTGCTGGAGAAAAATTTGGCAGACGATTTTGCGTTTTGTTCACCGGATACGCGACGACTGGATATCGATGAGCTGACAGTTTGCCATTACTTACAAAATATTCGTCAGCTACCACGCAATTTAGGGTTACACAGCAAAGACCGTTTGTTAATTAACCAGTCACCCCCCATGCCGCTGGTGACGGCGATTTTTGATAGCTTCAATGAATCCGGGGTAAATTCACCGATACTGAGCAATATGCTCTACCTTTCCTGTTTATCGATGTTTTCTCATAAGAAAGAACTGATCCCCTTACTTTTCAATAGCATCAGCACTGTTTCAGGAAAAGTTGAACGCCTTATTAGCTTTGATATCGCCAAACGTTGGTATCTGCGCGATATCGCGGAAAGAATGTATACCAGCGAGAGTCTAATCAAAAAAAAGTTGCAGGATGAAAATACCTGTTTCAGTAAAATATTACTCGCCTCCAGGATGTCGATGGCCAGACGATTACTCGAGTTACGTCAAATTCCTCTGCATACTATTGCGGAAAAATGTGGCTATAGCAGTACATCGTACTTTATAAACACATTTCGACAATATTATGGTGTAACGCCACATCAGTTTGCGCAACATTCGCCAGGTACCTTTTCCTGA", - "dna_sequence_length": 729, - "functions": [ - "transcriptional activator of gadA and gadBC", - "repressor of gadX" - ], - "id": "CDS_3452", - "location": [ - [ - "NC_000913", - 3664618, - "-", - 729 - ] - ], - "md5": "4aa9fd4a7f23066e91bf6aa512e0f0d0", - "parent_gene": "", - "protein_md5": "2d0584b36a0ac81361ae76d80a82fcf4", - "protein_translation": "MTHVCSVILIRRSFDIYHEQQKISLHNESILLLEKNLADDFAFCSPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGTFS", - "protein_translation_length": 242, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3501" - ], - [ - "gene_synonym", - "GI:16131388" - ], - [ - "gene_synonym", - "NP_417973.1" - ], - [ - "gene_synonym", - "JW3484" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37639" - ], - [ - "gene_synonym", - "GeneID:948028" - ], - [ - "gene_synonym", - "ASAP:ABE-0011487" - ], - [ - "gene_synonym", - "gadX" - ], - [ - "gene_synonym", - "yhiX" - ], - [ - "gene_synonym", - "b3516" - ], - [ - "gene_synonym", - "EcoGene:EG12243" - ] - ], - "dna_sequence": "ATGCAATCACTACATGGGAATTGTCTAATTGCGTATGCAAGACATAAATATATTCTCACCATGGTTAATGGTGAATATCGCTATTTTAATGGCGGTGACCTGGTTTTTGCGGATGCAAGCCAAATTCGAGTAGATAAGTGTGTTGAAAATTTTGTATTCGTGTCAAGGGACACGCTTTCATTATTTCTCCCGATGCTCAAGGAGGAGGCATTAAATCTTCATGCACATAAAAAAGTTTCTTCATTACTCGTTCATCACTGTAGTAGAGATATTCCTGTTTTTCAGGAAGTTGCGCAACTATCGCAGAATAAGAATCTTCGCTATGCAGAAATGCTACGTAAAAGAGCATTAATCTTTGCGTTGTTATCTGTTTTTCTTGAGGATGAGCACTTTATACCGCTGCTTCTGAACGTTTTACAACCGAACATGCGAACACGAGTTTGTACGGTTATCAATAATAATATCGCCCATGAGTGGACACTAGCCCGAATCGCCAGCGAGCTGTTGATGAGTCCAAGTCTGTTAAAGAAAAAATTGCGCGAAGAAGAGACATCATATTCACAGTTGCTTACTGAGTGTAGAATGCAACGTGCTTTGCAACTTATTGTTATACATGGTTTTTCAATTAAGCGAGTTGCAGTATCCTGTGGATATCACAGCGTGTCGTATTTCATTTACGTCTTTCGAAATTATTATGGGATGACGCCCACAGAGTATCAGGAGCGATCGGCGCAGAGATTGTCGAACCGTGACTCGGCGGCAAGTATTGTTGCGCAAGGGAATTTTTACGGCACTGACCGTTCTGCGGAAGGAATAAGATTATAG", - "dna_sequence_length": 825, - "functions": [ - "acid resistance regulon transcriptional activator", - "autoactivator" - ], - "id": "CDS_3453", - "location": [ - [ - "NC_000913", - 3665810, - "-", - 825 - ] - ], - "md5": "17641557eb2755f182f461cef847e618", - "parent_gene": "", - "protein_md5": "231dd8666a5a46d071509482027df3cd", - "protein_translation": "MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL", - "protein_translation_length": 274, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69908" - ], - [ - "gene_synonym", - "ECK3502" - ], - [ - "gene_synonym", - "EcoGene:EG50009" - ], - [ - "gene_synonym", - "GI:16131389" - ], - [ - "gene_synonym", - "JW3485" - ], - [ - "gene_synonym", - "GeneID:948027" - ], - [ - "gene_synonym", - "gadA" - ], - [ - "gene_synonym", - "NP_417974.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011490" - ], - [ - "gene_synonym", - "b3517" - ], - [ - "gene_synonym", - "gadS" - ] - ], - "dna_sequence": "ATGGACCAGAAGCTGTTAACGGATTTCCGCTCAGAACTACTCGATTCACGTTTTGGCGCAAAGGCCATTTCTACTATCGCGGAGTCAAAACGATTTCCGCTGCACGAAATGCGCGATGATGTCGCATTTCAGATTATCAATGATGAATTATATCTTGATGGCAACGCTCGTCAGAACCTGGCCACTTTCTGCCAGACCTGGGACGACGAAAACGTCCATAAATTGATGGATTTGTCGATCAATAAAAACTGGATCGACAAAGAAGAATATCCGCAATCCGCAGCCATCGACCTGCGTTGCGTAAATATGGTTGCCGATCTGTGGCATGCGCCTGCGCCGAAAAATGGTCAGGCCGTTGGCACCAACACCATTGGTTCTTCCGAGGCCTGTATGCTCGGCGGGATGGCGATGAAATGGCGTTGGCGCAAGCGTATGGAAGCTGCAGGCAAACCAACGGATAAACCAAACCTGGTGTGCGGTCCGGTACAAATCTGCTGGCATAAATTCGCCCGCTACTGGGATGTGGAGCTGCGTGAGATCCCTATGCGCCCCGGTCAGTTGTTTATGGACCCGAAACGCATGATTGAAGCCTGTGACGAAAACACCATCGGCGTGGTGCCGACTTTCGGCGTGACCTACACCGGTAACTATGAGTTCCCACAACCGCTGCACGATGCGCTGGATAAATTCCAGGCCGACACCGGTATCGACATCGACATGCACATCGACGCTGCCAGCGGTGGCTTCCTGGCACCGTTCGTCGCCCCGGATATCGTCTGGGACTTCCGCCTGCCGCGTGTGAAATCGATCAGTGCTTCAGGCCATAAATTCGGTCTGGCTCCGCTGGGCTGCGGCTGGGTTATCTGGCGTGACGAAGAAGCGCTGCCGCAGGAACTGGTGTTCAACGTTGACTACCTGGGTGGTCAAATTGGTACTTTTGCCATCAACTTCTCCCGCCCGGCGGGTCAGGTAATTGCACAGTACTATGAATTCCTGCGCCTCGGTCGTGAAGGCTATACCAAAGTACAGAACGCCTCTTACCAGGTTGCCGCTTATCTGGCGGATGAAATCGCCAAACTGGGGCCGTATGAGTTCATCTGTACGGGTCGCCCGGACGAAGGCATCCCGGCGGTTTGCTTCAAACTGAAAGATGGTGAAGATCCGGGATACACCCTGTACGACCTCTCTGAACGTCTGCGTCTGCGCGGCTGGCAGGTTCCGGCCTTCACTCTCGGCGGTGAAGCCACCGACATCGTGGTGATGCGCATTATGTGTCGTCGCGGCTTCGAAATGGACTTTGCTGAACTGTTGCTGGAAGACTACAAAGCCTCCCTGAAATATCTCAGCGATCACCCGAAACTGCAGGGTATTGCCCAGCAGAACAGCTTTAAACACACCTGA", - "dna_sequence_length": 1401, - "functions": [ - "glutamate decarboxylase A, PLP-dependent" - ], - "id": "CDS_3454", - "location": [ - [ - "NC_000913", - 3667580, - "-", - 1401 - ] - ], - "md5": "7bf65bf9be53f1737044cc9194bf7831", - "parent_gene": "", - "protein_md5": "2b4f5dc375d165b36bcd059ce2986a5b", - "protein_translation": "MDQKLLTDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHPKLQGIAQQNSFKHT", - "protein_translation_length": 466, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3503" - ], - [ - "gene_synonym", - "JW3486" - ], - [ - "gene_synonym", - "NP_417975.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37197" - ], - [ - "gene_synonym", - "yhjA" - ], - [ - "gene_synonym", - "GeneID:948038" - ], - [ - "gene_synonym", - "GI:16131390" - ], - [ - "gene_synonym", - "b3518" - ], - [ - "gene_synonym", - "EcoGene:EG12244" - ], - [ - "gene_synonym", - "ASAP:ABE-0011493" - ] - ], - "dna_sequence": "ATGAAAATGGTCTCACGTATTACCGCGATCGGCCTGGCTGGCGTCGCGATTTGCTATTTAGGGTTATCTGGTTATGTGTGGTACCACGATAATAAACGCAGTAAACAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGAAAAAGGATGCGACTATTGCCACACGCCTTCGGCAGAATTACCCGCCTATTATTATATTCCTGGCGCGAAACAGTTGATGGATTACGACATTAAGCTTGGATATAAATCTTTTAACCTTGAGGCCGTGCGTGCGGCACTGCTGGCTGATAAACCCGTTTCGCAAAGCGATTTGAATAAGATTGAATGGGTGATGCAGTATGAAACTATGCCACCAACGCGTTATACCGCGCTACACTGGGCGGGTAAGGTGAGTGATGAAGAGCGGGCGGAAATACTGGCCTGGATTGCAAAACAGCGCGCGGAATATTACGCCAGCAATGATACTGCTCCGGAACATCGCAATGAACCGGTGCAGCCCATCCCGCAAAAACTGCCTACCGATGCGCAAAAAGTGGCGTTGGGTTTTGCGCTGTATCACGATCCCCGTTTATCGGCTGATAGCACCATTTCATGCGCTCATTGCCATGCGTTGAATGCGGGGGGCGTCGATGGCAGAAAAACATCGATTGGTGTTGGTGGCGCAGTTGGGCCGATTAACGCGCCGACGGTATTTAACTCAGTATTTAACGTTGAGCAGTTCTGGGATGGTCGTGCGGCAACATTGCAGGATCAGGCTGGTGGACCGCCGTTGAACCCGATTGAAATGGCGTCGAAATCCTGGGACGAAATTATTGCTAAGCTGGAAAAAGATCCGCAGCTTAAAACGCAGTTCCTCGAAGTCTATCCGCAAGGTTTCAGTGGCGAAAATATTACTGATGCCATTGCTGAATTTGAGAAAACATTAATTACGCCGGATTCCCCATTTGATAAATGGTTGCGCGGAGATGAAAATGCGCTGACGGCGCAACAGAAAAAAGGCTATCAATTATTTAAAGATAATAAATGTGCAACTTGTCATGGTGGTATTATTCTCGGCGGACGTTCCTTTGAACCGTTGGGGCTGAAAAAAGACTTTAACTTTGGGGAAATTACGGCGGCGGATATTGGTCGTATGAATGTGACTAAAGAAGAGCGTGATAAATTGCGTCAGAAAGTACCCGGTTTACGTAACGTTGCTTTAACGGCACCGTACTTCCATCGCGGTGACGTGCCGACGCTGGACGGGGCGGTGAAACTGATGCTGCGCTATCAGGTAGGCAAAGAGCTGCCGCAGGAGGATGTGGATGATATCGTAGCTTTCCTGCACAGTCTGAACGGGGTGTACACGCCGTATATGCAGGATAAACAATAA", - "dna_sequence_length": 1398, - "functions": [ - "putative cytochrome C peroxidase" - ], - "id": "CDS_3455", - "location": [ - [ - "NC_000913", - 3669188, - "-", - 1398 - ] - ], - "md5": "fd659a9947c5c2107d20b6353fae23f9", - "parent_gene": "", - "protein_md5": "95804d582c3fa91c2361e84073f42252", - "protein_translation": "MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAVSENNKVLGFLREKGCDYCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAALLADKPVSQSDLNKIEWVMQYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYASNDTAPEHRNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVFNSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSWDEIIAKLEKDPQLKTQFLEVYPQGFSGENITDAIAEFEKTLITPDSPFDKWLRGDENALTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQKVPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFLHSLNGVYTPYMQDKQ", - "protein_translation_length": 465, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948037" - ], - [ - "gene_synonym", - "ECK3504" - ], - [ - "gene_synonym", - "JW3487" - ], - [ - "gene_synonym", - "NP_417976.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P62601" - ], - [ - "gene_synonym", - "GI:16131391" - ], - [ - "gene_synonym", - "treF" - ], - [ - "gene_synonym", - "b3519" - ], - [ - "gene_synonym", - "EcoGene:EG12245" - ], - [ - "gene_synonym", - "ASAP:ABE-0011497" - ] - ], - "dna_sequence": "ATGCTCAATCAGAAAATTCAAAACCCTAATCCAGACGAACTGATGATCGAAGTCGATCTCTGCTATGAGCTGGACCCGTATGAATTAAAACTGGATGAGATGATCGAGGCAGAACCGGAACCCGAGATGATTGAAGGGCTGCCTGCCTCTGATGCGCTGACGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCGACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGTTTGTTGAAAACCACTTCTGGCTGCCGGAGGTCTACTCCAGCGAGTATGTATCGGACCCGCAAAATTCCCTGAAAGAGCATATCGACCAGCTGTGGCCGGTGCTAACCCGCGAACCACAGGATCACATTCCGTGGTCTTCTCTGCTGGCGCTGCCGCAGTCATATATTGTCCCGGGCGGCCGTTTTAGCGAAACCTACTATTGGGATTCCTATTTCACCATGCTGGGGCTGGCGGAAAGTGGTCGGGAAGATTTGCTGAAATGCATGGCCGATAACTTCGCCTGGATGATCGAAAACTACGGTCACATCCCCAACGGCAACCGCACCTATTATTTGAGCCGCTCGCAACCACCGGTTTTTGCGCTGATGGTGGAGTTGTTTGAAGAAGATGGTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGATTACTCTTCCCGTTGGCTGCGTGATACTGGTCGTCTGGCGAGCATTCGTACCACCCAGTTCATCCCCATCGATCTGAATGCCTTCCTGTTTAAACTGGAGAGCGCCATCGCCAACATCTCGGCGCTGAAAGGCGAGAAAGAGACAGAAGCACTGTTCCGCCAGAAAGCCAGTGCCCGTCGCGATGCGGTAAACCGTTACCTCTGGGATGATGAAAACGGCATCTACCGCGATTACGACTGGCGACGCGAACAACTGGCGCTGTTTTCCGCTGCCGCCATTGTGCCACTCTATGTCGGTATGGCGAACCATGAACAGGCCGATCGTCTGGCAAACGCCGTGCGCAGTCGGTTACTGACACCTGGCGGGATTCTGGCAAGCGAGTACGAAACCGGTGAACAGTGGGATAAACCCAACGGCTGGGCACCGTTACAATGGATGGCGATTCAGGGATTTAAAATGTACGGCGATGACCTTCTGGGTGATGAAATCGCGCGAAGCTGGCTGAAGACGGTGAATCAGTTCTATCTGGAACAGCACAAACTGATCGAAAAATACCATATTGCCGATGGTGTTCCCCGCGAAGGCGGCGGTGGCGAGTATCCGTTGCAGGATGGGTTTGGCTGGACTAACGGTGTGGTACGCCGTTTAATTGGTTTGTACGGCGAACCATAA", 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"gene_synonym", - "ECK3505" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37640" - ], - [ - "gene_synonym", - "JW3488" - ], - [ - "gene_synonym", - "GI:16131392" - ], - [ - "gene_synonym", - "yhjB" - ], - [ - "gene_synonym", - "ASAP:ABE-0011499" - ], - [ - "gene_synonym", - "b3520" - ], - [ - "gene_synonym", - "NP_417977.1" - ], - [ - "gene_synonym", - "EcoGene:EG12246" - ] - ], - "dna_sequence": "ATGCAAATAGTCATGTTTGACAGGCAGTCAATATTTATTCATGGAATGAAAATCAGTTTACAGCAGCGTATTCCAGGAGTGAGTATTCAGGGGGCCAGTCAGGCAGACGAGTTATGGCAAAAGCTGGAAAGTTACCCTGAAGCCTTAGTTATGCTCGATGGCGATCAGGATGGTGAGTTTTGCTACTGGTTGCTGCAAAAAACCGTGGTGCAATTTCCTGAGGTTAAGGTGTTAATTACGGCGACGGATTGCAATAAACGGTGGTTACAGGAAGTTATCCATTTTAATGTGCTGGCCATTGTGCCTCGTGATTCAACCGTCGAGACATTTGCGTTGGCGGTAAATAGTGCGGCGATGGGGATGATGTTTCTGCCTGGAGACTGGCGGACGACGCCGGAAAAGGACATTAAAGATCTCAAATCGTTAAGCGCCCGCCAGCGGGAGATTTTAACCATGTTAGCGGCGGGCGAATCAAATAAGGAGATCGGCAGAGCGCTGAATATCAGTACCGGAACGGTAAAAGCGCATCTGGAATCCCTGTATCGCCGTCTGGAAGTGAAAAATCGCACCCAGGCGGCAATGATGTTAAATATCTCCTCCTGA", - "dna_sequence_length": 603, - "functions": [ - "putative DNA-binding transcriptional response regulator" - ], - "id": "CDS_3457", - "location": [ - [ - "NC_000913", - 3671894, - "-", - 603 - ] - ], - "md5": "44e5cdd5bb601a107b9de8d4ea0e1b83", - "parent_gene": "", - "protein_md5": "ac797bbc1012fe9e3a1d90be39c0f000", - "protein_translation": "MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNISS", - "protein_translation_length": 200, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948035" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37641" - ], - [ - "gene_synonym", - "ECK3506" - ], - [ - "gene_synonym", - "NP_417978.2" - ], - [ - "gene_synonym", - "JW3489" - ], - [ - "gene_synonym", - "yhjC" - ], - [ - "gene_synonym", - "b3521" - ], - [ - "gene_synonym", - "GI:145698322" - ], - [ - "gene_synonym", - "ASAP:ABE-0011503" - ], - [ - "gene_synonym", - "EcoGene:EG12247" - ] - ], - "dna_sequence": "ATGGATAAAATTCACGCAATGCAGTTGTTCATCAAAGTCGCGGAGCTGGAAAGTTTTTCCCGCGCAGCGGATTTCTTTGCTTTGCCAAAGGGAAGTGTTTCGCGCCAGATACAGGCACTGGAACATCAACTTGGCACCCAGCTTCTCCAGCGCACCACGCGACGGGTCAAACTCACGCCAGAAGGCATGACCTATTATCAACGAGCAAAAGATGTGTTGAGTAATCTCAGCGAACTGGACGGTCTGTTTCAACAGGATGCCACCAGTATCAGCGGTAAATTACGCATCGACATCCCGCCAGGAATCGCGAAAAGCCTGTTACTGCCGCGCCTGTCGGAATTTCTCTATCTGCATCCGGGAATTGAGCTGGAACTGAGTAGCCATGACCGTCCGGTAGATATTCTTCATGATGGTTTTGATTGCGTGATACGCACTGGCGCGTTACCGGAAGATGGCGTTATCGCCCGTCCCCTCGGCAAACTGACCATGGTCAACTGTGCCAGTCCGCACTATCTGACGCGCTTTGGTTATCCGCAAAGCCCCGATGATCTGACTTCACACGCAATAGTGCGTTATACACCGCACCTGGGTGTACATCCGTTAGGTTTTGAGGTTGCCAGCGTTAATGGCGTCCAGTGGTTTAAGTCTGGCGGCATGTTGACGGTAAACAGTAGCGAAAACTATCTCACCGCCGGTCTTGCCGGTCTGGGGATTATTCAGATCCCGCGCATTGCCGTGCGCGAAGCCCTGCGTGCCGGGCGGCTTATTGAAGTATTACCTGGCTACCGTGCCGAGCCGCTCTCCCTTTCGCTGGTTTATCCGCAGCGTCGGGAGCTTTCCCGGCGTGTAAACCTGTTTATGCAGTGGCTGGCTGGCGTAATGAAAGAGTACCTGGACTGA", - "dna_sequence_length": 900, - "functions": [ - "LysR family putative transcriptional regulator" - ], - "id": "CDS_3458", - "location": [ - [ - "NC_000913", - 3672414, - "+", - 900 - ] - ], - "md5": "96717ecb53670c877b71a7cd0aacb3f1", - "parent_gene": "", - "protein_md5": "665b1496a8dda2ff4cab136ee69e47cd", - "protein_translation": "MDKIHAMQLFIKVAELESFSRAADFFALPKGSVSRQIQALEHQLGTQLLQRTTRRVKLTPEGMTYYQRAKDVLSNLSELDGLFQQDATSISGKLRIDIPPGIAKSLLLPRLSEFLYLHPGIELELSSHDRPVDILHDGFDCVIRTGALPEDGVIARPLGKLTMVNCASPHYLTRFGYPQSPDDLTSHAIVRYTPHLGVHPLGFEVASVNGVQWFKSGGMLTVNSSENYLTAGLAGLGIIQIPRIAVREALRAGRLIEVLPGYRAEPLSLSLVYPQRRELSRRVNLFMQWLAGVMKEYLD", - "protein_translation_length": 299, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3490" - ], - [ - "gene_synonym", - "GeneID:948033" - ], - [ - "gene_synonym", - "ECK3507" - ], - [ - "gene_synonym", - "yhjD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37642" - ], - [ - "gene_synonym", - "GI:16131394" - ], - [ - "gene_synonym", - "NP_417979.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011505" - ], - [ - "gene_synonym", - "b3522" - ], - [ - "gene_synonym", - "EcoGene:EG12248" - ] - ], - "dna_sequence": "ATGACGCAGGAAAACGAGATCAAACGTCCCATCCAGGATCTGGAGCACGAGCCGATTAAGCCGTTGGATAATAGCGAGAAAGGCAGCAAAGTTAGCCAGGCGCTGGAAACCGTCACCACCACTGCCGAAAAAGTCCAACGCCAACCGGTTATTGCGCACCTGATTCGCGCGACAGAACGCTTTAACGATCGGCTGGGTAACCAGTTTGGTGCGGCTATCACCTATTTCTCATTTTTGTCGATGATACCAATTTTGATGGTGTCGTTTGCCGCAGGGGGCTTTGTGCTGGCCTCCCATCCGATGTTGCTACAGGATATCTTCGACAAAATTCTGCAAAACATCAGCGATCCGACGCTAGCCGCCACGTTGAAAAACACCATCAACACCGCCGTTCAGCAGCGTACGACTGTAGGGCTTGTCGGCCTGGCGGTGGCACTTTATTCCGGCATCAACTGGATGGGTAACCTGCGTGAAGCGATTCGTGCCCAGTCGCGCGATGTCTGGGAACGCTCGCCGCAAGATCAGGAGAAGTTCTGGGTAAAATATCTGCGAGATTTTATTTCGCTGATTGGTTTGTTGATTGCGCTGATTGTGACGCTTTCGATCACCTCGGTTGCCGGTTCGGCGCAGCAAATGATTATTAGCGCCCTGCACCTGAACAGCATTGAGTGGCTGAAACCGACGTGGCGATTGATTGGCCTGGCGATTTCCATCTTCGCCAACTATCTGCTTTTCTTCTGGATCTTCTGGCGGTTGCCGCGCCACCGTCCGCGCAAAAAAGCCCTGATTCGCGGAACATTTCTGGCTGCTATTGGTTTTGAAGTGATTAAAATCGTGATGACCTACACCCTGCCATCGTTGATGAAATCCCCCTCTGGCGCAGCATTTGGTTCCGTGCTGGGGCTGATGGCATTTTTCTACTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAA", - "dna_sequence_length": 1014, - "functions": [ - "inner membrane putative BrbK family alternate lipid exporter" - ], - "id": "CDS_3459", - "location": [ - [ - "NC_000913", - 3673362, - "+", - 1014 - ] - ], - "md5": "1331679e905ce2d1f1d82f8a2d48de47", - "parent_gene": "", - "protein_md5": "3e1737b4d0fa1a6a841588f94205858e", - "protein_translation": "MTQENEIKRPIQDLEHEPIKPLDNSEKGSKVSQALETVTTTAEKVQRQPVIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDKILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMKSPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMPGKTQP", - "protein_translation_length": 337, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3491" - ], - [ - "gene_synonym", - "NP_417980.1" - ], - [ - "gene_synonym", - "GeneID:948032" - ], - [ - "gene_synonym", - "yhjE" - ], - [ - "gene_synonym", - "GI:16131395" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37643" - ], - [ - "gene_synonym", - "ECK3508" - ], - [ - "gene_synonym", - "b3523" - ], - [ - "gene_synonym", - "EcoGene:EG12249" - ], - [ - "gene_synonym", - "ASAP:ABE-0011509" - ] - ], - "dna_sequence": "ATGCAAGCAACAGCCACAACACTCGACCACGAGCAAGAATACACGCCGATCAACTCGCGTAATAAAGTCCTTGTCGCCTCTCTCATTGGCACAGCCATTGAGTTCTTCGACTTTTACATTTACGCCACTGCGGCCGTTATTGTGTTTCCGCATATCTTCTTCCCGCAGGGCGATCCTACGGCAGCAACGCTACAGTCGCTCGCCACCTTCGCCATCGCCTTCGTCGCGCGCCCCATTGGCTCTGCCGTTTTTGGTCATTTTGGCGATCGCGTTGGGCGTAAAGCGACGCTGGTCGCCTCGTTGCTAACGATGGGGATTTCGACCGTGGTGATTGGTCTGCTGCCGGGCTATGCCACGATTGGTATTTTCGCCCCGCTGCTGCTGGCGCTGGCTCGATTTGGTCAGGGTCTGGGCTTAGGCGGTGAATGGGGCGGCGCGGCGCTGCTGGCGACTGAAAACGCCCCACCGCGCAAACGTGCACTGTATGGCTCCTTTCCGCAGCTGGGCGCACCGATTGGCTTCTTCTTTGCCAATGGCACTTTCTTGCTGCTTTCCTGGCTACTGACCGACGAGCAGTTTATGAGCTGGGGCTGGCGTGTGCCATTTATCTTCTCGGCGGTGCTGGTCATTATCGGCCTGTATGTTCGCGTGTCGCTGCATGAGTCGCCGGTGTTTGAGAAAGTCGCTAAAGCGAAAAAACAGGTGAAGATCCCGCTGGGTACGCTGCTGACCAAACATGTTCGCGTAACCGTACTGGGTACGTTCATTATGCTGGCAACCTATACGCTGTTTTACATCATGACGGTCTACTCTATGACCTTTAGTACCGCCGCCGCGCCAGTTGGGCTTGGCCTGCCGCGTAACGAAGTGTTGTGGATGTTGATGATGGCAGTTATTGGTTTTGGCGTGATGGTGCCAGTCGCTGGATTACTGGCTGATGCCTTTGGTCGCCGTAAAAGCATGGTAATCATCACCACGCTGATCATCCTGTTCGCGCTGTTCGCCTTTAACCCACTGCTCGGTTCTGGCAACCCGATTCTGGTTTTTGCCTTCCTGCTGCTGGGGTTAAGTCTGATGGGTCTGACCTTCGGGCCAATGGGTGCGCTGTTACCAGAGCTGTTTCCGACAGAAGTGCGTTACACCGGAGCATCGTTCTCTTACAACGTAGCGTCGATTCTCGGGGCTTCCGTTGCGCCATATATCGCAGCCTGGTTGCAGACTAACTACGGGCTAGGTGCGGTGGGGTTATATCTGGCGGCGATGGCTGGCTTGACGTTAATCGCCCTGCTGCTGACCCATGAGACGCGACATCAGTCGTTGTAA", - "dna_sequence_length": 1323, - "functions": [ - "putative MFS transporter", - "membrane protein" - ], - "id": "CDS_3460", - "location": [ - [ - "NC_000913", - 3674786, - "+", - 1323 - ] - ], - "md5": "94341cd9633a2471a5ffdfaa2f5e2bb8", - "parent_gene": "", - "protein_md5": "21e767f9db07c80048f10d7a0187a4b3", - "protein_translation": "MQATATTLDHEQEYTPINSRNKVLVASLIGTAIEFFDFYIYATAAVIVFPHIFFPQGDPTAATLQSLATFAIAFVARPIGSAVFGHFGDRVGRKATLVASLLTMGISTVVIGLLPGYATIGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRALYGSFPQLGAPIGFFFANGTFLLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVSLHESPVFEKVAKAKKQVKIPLGTLLTKHVRVTVLGTFIMLATYTLFYIMTVYSMTFSTAAAPVGLGLPRNEVLWMLMMAVIGFGVMVPVAGLLADAFGRRKSMVIITTLIILFALFAFNPLLGSGNPILVFAFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVASILGASVAPYIAAWLQTNYGLGAVGLYLAAMAGLTLIALLLTHETRHQSL", - "protein_translation_length": 440, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3492" - ], - [ - "gene_synonym", - "ECK3509" - ], - [ - "gene_synonym", - "yhjG" - ], - [ - "gene_synonym", - "yhjF" - ], - [ - "gene_synonym", - "GI:226524754" - ], - [ - "gene_synonym", - "NP_417981.2" - ], - [ - "gene_synonym", - "GeneID:948043" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37645" - ], - [ - "gene_synonym", - "b3524" - ], - [ - "gene_synonym", - "ASAP:ABE-0011512" - ], - [ - "gene_synonym", - "EcoGene:EG12251" - ] - ], - "dna_sequence": "ATGAGCAAGGCAGGCAAAATAACCGCTGCGATTTCAGGGGCTTTCTTGTTGTTGATTGTCGTGGCGATCATTTTGATTGCAACTTTTGACTGGAATCGACTCAAACCGACTATCAACCAGAAAGTCTCTGCGGAGTTGAATCGTCCGTTCGCTATCCGTGGCGATCTGGGCGTGGTGTGGGAGCGGCAAAAACAAGAAACTGGCTGGCGCAGCTGGGTGCCGTGGCCCCATGTACACGCGGAAGACATCATTCTTGGCAATCCACCGGATATTCCCGAAGTCACGATGGTGCATTTGCCACGCGTAGAGGCAACGCTGGCCCCGCTGGCGCTGCTGACCAAAACGGTCTGGCTGCCGTGGATCAAGCTCGAAAAGCCCGACGCGCGCCTGATTCGCCTCTCTGAAAAGAACAATAACTGGACGTTTAATCTTGCCAACGATGATAACAAAGACGCGAATGCAAAGCCGTCGGCATGGTCGTTTCGGCTGGATAATATTCTTTTCGATCAAGGGCGGATCGCCATTGATGACAAAGTAAGCAAAGCGGATCTGGAGATTTTTGTTGATCCCTTAGGCAAGCCGCTGCCGTTCAGCGAAGTTACTGGATCGAAAGGTAAAGCGGATAAAGAAAAGGTGGGCGATTACGTTTTTGGCCTGAAGGCGCAGGGACGATATAACGGTGAACCGCTCACGGGTACGGGAAAAATAGGCGGTATGCTGGCGCTGCGTGGCGAAGGGACGCCGTTTCCGGTACAGGCTGATTTCCGCTCTGGTAACACCCGTGTTGCTTTTGATGGCGTCGTGAATGACCCAATGAAGATGGGCGGTGTCGATTTACGGCTTAAATTTTCTGGCGATTCACTGGGTGATCTCTATGAACTGACGGGCGTTCTGCTGCCCGATACCCCGCCGTTTGAAACGGATGGTCGGCTGGTAGCGAAAATCGACACTGAAAAATCGTCGGTCTTTGATTATCGCGGTTTTAATGGGCGAATTGGTGATAGCGATATCCACGGTTCTCTGGTCTACACCACCGGAAAGCCACGACCAAAACTGGAAGGTGATGTCGAGTCGCGGCAATTGCGGCTGGCGGACCTGGGACCGTTGATTGGCGTTGATTCCGGGAAAGGGGCAGAAAAGTCGAAACGGTCTGAACAGAAGAAGGGCGAAAAAAGCGTTCAGCCTGCGGGCAAAGTGCTGCCTTATGACCGCTTCGAAACCGATAAATGGGACGTTATGGATGCCGATGTTCGCTTCAAAGGGCGGCGCATTGAGCATGGCAGTAGCCTGCCGATTAGCGATCTTTCTACTCATATCATCCTCAAAAATGCTGACCTGCGCCTGCAACCGCTGAAATTTGGCATGGCGGGCGGCAGCATTGCGGCGAATATTCATCTGGAAGGCGATAAAAAGCCGATGCAGGGGCGGGCAGATATTCAGGCTCGTCGACTGAAACTGAAAGAACTGATGCCCGATGTGGAACTGATGCAGAAGACGCTGGGGGAAATGAACGGTGACGCGGAACTACGCGGTAGCGGTAACTCGGTGGCGGCACTTTTAGGCAACAGTAACGGCAACCTGAAACTGTTGATGAATGACGGGCTGGTGAGCCGCAACCTGATGGAGATTGTTGGGCTGAATGTCGGCAACTACATTGTCGGTGCGATATTTGGTGATGATGAGGTGCGGGTGAACTGCGCGGCGGCGAATCTGAATATTGCCAACGGCGTGGCGCGCCCGCAGATTTTTGCTTTCGATACTGAGAACGCGTTGATTAATGTTACCGGCACGGCAAGTTTTGCTTCGGAACAGCTGGATTTGACTATTGATCCGGAGAGTAAAGGAATTCGGATTATCACACTGCGTTCGCCGCTGTATGTGCGGGGGACGTTTAAAAATCCGCAGGCTGGGGTGAAAGCCGGACCGCTGATTGCCCGTGGTGCTGTTGCTGCGGCACTGGCAACGCTGGTAACACCGGCGGCGGCGTTACTGGCACTGATCTCACCTTCCGAAGGGGAGGCTAATCAGTGTCGGACGATTTTGTCGCAGATGAAGAAGTGA", - "dna_sequence_length": 2061, - "functions": [ - "putative inner membrane-anchored periplasmic AsmA family protein" - ], - "id": "CDS_3461", - "location": [ - [ - "NC_000913", - 3678350, - "-", - 2061 - ] - ], - "md5": "1cf022e6287645d6bb39baa228d3395c", - "parent_gene": "", - "protein_md5": "4294920d88d2db92cb19badef5b2ded4", - "protein_translation": "MSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRVEATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWSFRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFGLKAQGRYNGEPLTGTGKIGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGGVDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGDSDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKSVQPAGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQPLKFGMAGGSIAANIHLEGDKKPMQGRADIQARRLKLKELMPDVELMQKTLGEMNGDAELRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGAIFGDDEVRVNCAAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSPLYVRGTFKNPQAGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILSQMKK", - "protein_translation_length": 686, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3493" - ], - [ - "gene_synonym", - "ECK3510" - ], - [ - "gene_synonym", - "yhjH" - ], - [ - "gene_synonym", - "ASAP:ABE-0011515" - ], - [ - "gene_synonym", - "NP_417982.2" - ], - [ - "gene_synonym", - "GeneID:948042" - ], - [ - "gene_synonym", - "b3525" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37646" - ], - [ - "gene_synonym", - "GI:90111605" - ], - [ - "gene_synonym", - "EcoGene:EG12252" - ] - ], - "dna_sequence": "ATGATAAGGCAGGTTATCCAGCGAATAAGCAACCCTGAAGCAAGCATCGAGAGCTTGCAGGAACGGCGTTTTTGGTTGCAGTGTGAGCGTGCTTACACCTGGCAGCCGATCTATCAAACATGCGGGCGGTTAATGGCCGTGGAGCTATTAACGGTGGTCACGCATCCCTTGAACCCTTCGCAACGCCTGCCGCCGGATCGCTATTTTACTGAAATCACCGTCAGCCATCGGATGGAGGTTGTGAAAGAGCAGATTGATTTGCTGGCGCAAAAAGCCGACTTCTTTATAGAGCACGGCCTGCTGGCATCGGTCAATATTGATGGCCCTACGCTCATCGCCCTGCGTCAGCAACCAAAAATCCTGCGCCAGATTGAGCGTCTTCCCTGGCTGCGTTTCGAACTGGTGGAGCATATCCGTCTGCCGAAAGATTCAACCTTTGCCTCGATGTGTGAATTTGGCCCGCTGTGGCTGGATGATTTTGGTACCGGGATGGCAAATTTCTCTGCGCTAAGTGAAGTGCGTTATGACTACATCAAAATCGCGCGAGAACTGTTTGTGATGCTGCGTCAGTCGCCGGAAGGACGCACACTCTTTTCTCAGCTTTTACATCTAATGAATCGCTATTGTCGCGGGGTGATTGTCGAGGGCGTAGAAACGCCGGAAGAGTGGCGTGATGTTCAGAACTCGCCCGCATTCGCCGCACAAGGCTGGTTTCTTTCACGCCCGGCACCGATAGAAACGCTGAATACGGCGGTTCTGGCGCTATAA", - "dna_sequence_length": 768, - "functions": [ - "cyclic-di-GMP phosphodiesterase, FlhDC-regulated" - ], - "id": "CDS_3462", - "location": [ - [ - "NC_000913", - 3679187, - "-", - 768 - ] - ], - "md5": "4694dec07ce44ab998a0ffe2aa1a7ba6", - "parent_gene": "", - "protein_md5": "c38a51b02bc41e134984cdbaa5aa2a34", - "protein_translation": "MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRLMAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLASVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLDDFGTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVETPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL", - "protein_translation_length": 255, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3511" - ], - [ - "gene_synonym", - "yhjI" - ], - [ - "gene_synonym", - "EcoGene:EG12253" - ], - [ - "gene_synonym", - "kdgK" - ], - [ - "gene_synonym", - "GeneID:948041" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37647" - ], - [ - "gene_synonym", - "b3526" - ], - [ - "gene_synonym", - "JW5668" - ], - [ - "gene_synonym", - "NP_417983.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0011519" - ], - [ - "gene_synonym", - "GI:90111606" - ] - ], - "dna_sequence": "ATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTACATTGAAACCGACAGCACCGGCGAGCGTACGTTCTACTACTGGCGGAACGAAGCCGCCGCCAAATTCTGGCTGGAGAGTGAGCAGTCTGCGGCGATTTGCGAAGAGCTGGCGAATTTCGATTATCTCTACCTGAGCGGGATTAGCCTGGCGATCTTAAGCCCGACCAGCCGCGAAAAGCTGCTTTCCCTGCTGCGCGAATGCCGCGCCAACGGCGGAAAAGTGATTTTCGACAATAACTATCGTCCGCGCCTGTGGGCCAGCAAAGAAGAGACACAGCAGGTGTACCAACAAATGCTGGAATGCACGGATATCGCCTTCCTGACGCTGGACGACGAAGACGCGCTGTGGGGTCAACAGCCGGTGGAAGACGTCATTGCGCGCACCCATAACGCGGGCGTGAAAGAAGTGGTGGTGAAACGCGGGGCGGATTCTTGCCTGGTGTCCATTGCTGGCGAAGGGTTAGTGGATGTTCCGGCGGTGAAACTGCCGAAAGAAAAAGTGATCGATACCACCGCAGCTGGCGACTCTTTCAGTGCCGGTTATCTGGCGGTACGTCTGACAGGCGGCAGCGCGGAAGACGCGGCGAAACGTGGGCACCTGACCGCAAGTACCGTTATTCAGTATCGCGGCGCGATTATCCCGCGTGAGGCGATGCCAGCGTAA", - "dna_sequence_length": 930, - "functions": [ - "2-dehydro-3-deoxygluconokinase" - ], - "id": "CDS_3463", - "location": [ - [ - "NC_000913", - 3679419, - "+", - 930 - ] - ], - "md5": "0617e06b8483f3d8b0e8889005ef3dff", - "parent_gene": "", - "protein_md5": "d1b9a14cf123ec8d34db0242ae100040", - "protein_translation": "MSKKIAVIGECMIELSEKGADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLESEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLRECRANGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAGEGLVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAEDAAKRGHLTASTVIQYRGAIIPREAMPA", - "protein_translation_length": 309, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3512" - ], - [ - "gene_synonym", - "JW3495" - ], - [ - "gene_synonym", - "GI:16131399" - ], - [ - "gene_synonym", - "yhjJ" - ], - [ - "gene_synonym", - "NP_417984.1" - ], - [ - "gene_synonym", - "GeneID:948040" - ], - [ - "gene_synonym", - "b3527" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37648" - ], - [ - "gene_synonym", - "ASAP:ABE-0011524" - ], - [ - "gene_synonym", - "EcoGene:EG12254" - ] - ], - "dna_sequence": "ATGCAGGGCACAAAAATTCGACTTTTAGCGGGCGGTTTGCTGATGATGGCCACTGCTGGCTATGTGCAGGCAGATGCGCTCCAGCCTGATCCAGCATGGCAACAGGGGACGCTTTCCAACGGTTTACAGTGGCAAGTGCTGACCACCCCCCAGCGTCCCAGCGATCGTGTTGAAATTCGCCTGCTGGTTAATACCGGTTCGCTCGCCGAAAGTACACAACAGAGCGGTTACAGTCACGCCATCCCTCGTATTGCGCTAACGCAAAGCGGTGGCCTTGACGCAGCACAGGCGCGTTCATTGTGGCAGCAGGGGATCGACCCTAAACGCCCGATGCCGCCGGTAATTGTCTCTTATGACACCACGCTGTTTAATCTGAGTTTGCCCAATAACCGTAACGATTTGCTGAAAGAAGCGCTCTCTTATCTGGCAAATGCCACTGGCAAATTGACCATCACACCAGAAACCATCAACCACGCGCTGCAAAGTCAGGACATGGTGGCAACCTGGCCTGCCGATACTAAAGAGGGCTGGTGGCGCTATCGTCTGAAAGGGTCAACCTTGTTAGGTCACGATCCTGCCGATCCGCTGAAACAACCCGTTGAAGCGGAAAAAATTAAAGATTTCTATCAGAAATGGTACACCCCGGATGCAATGACGCTACTGGTGGTGGGAAACGTGGATGCGCGCTCGGTTGTCGACCAAATAAACAAAACGTTTGGCGAACTGAAAGGCAAACGTGAAACGCCAGCTCCGGTGCCGACGCTTTCTCCGCTGCGTGCGGAAGCGGTGAGTATTATGACTGACGCGGTGCGTCAGGACCGGTTATCTATCATGTGGGATACGCCGTGGCAGCCGATTCGTGAATCAGCCGCACTGCTGCGCTACTGGCGTGCGGACCTGGCCCGCGAGGCGCTGTTCTGGCATGTTCAGCAAGCGTTAAGTGCCAGTAACAGCAAAGACATCGGTCTTGGATTTGACTGCCGTGTGCTGTATCTGCGTGCGCAGTGTGCCATCAACATCGAATCACCAAACGACAAGCTGAACAGCAACCTTAATCTGGTGGCGCGTGAACTGGCGAAGGTTCGCGATAAAGGTCTGCCGGAAGAAGAGTTCAATGCGTTAGTGGCGCAAAAGAAACTGGAGCTGCAGAAACTGTTTGCCGCCTATGCACGAGCTGATACCGATATTCTGATGGGTCAGCGGATGCGTTCGTTGCAAAATCAGGTTGTCGATATCGCGCCGGAGCAATATCAGAAACTGCGGCAGGATTTCCTTAATAGCCTGACGGTAGAGATGTTAAATCAGGATCTGCGTCAACAGTTGTCGAATGATATGGCGTTAATACTGCTGCAGCCGAAAGGCGAGCCGGAATTTAACATGAAAGCGTTGCAGGCGGTCTGGGATCAAATCATGGCCCCATCTACCGCCGCTGCGACCACCTCTGTCGCCACGGATGACGTACATCCTGAAGTGACGGATATTCCACCTGCACAGTAA", - "dna_sequence_length": 1497, - "functions": [ - "putative periplasmic M16 family chaperone" - ], - "id": "CDS_3464", - "location": [ - [ - "NC_000913", - 3681940, - "-", - 1497 - ] - ], - "md5": "fc42678586442665fbaba3b21f652760", - "parent_gene": "", - "protein_md5": "591b84a30cf87f265aca74e16f774d89", - "protein_translation": "MQGTKIRLLAGGLLMMATAGYVQADALQPDPAWQQGTLSNGLQWQVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAAQARSLWQQGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPETINHALQSQDMVATWPADTKEGWWRYRLKGSTLLGHDPADPLKQPVEAEKIKDFYQKWYTPDAMTLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPTLSPLRAEAVSIMTDAVRQDRLSIMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALSASNSKDIGLGFDCRVLYLRAQCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNALVAQKKLELQKLFAAYARADTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSNDMALILLQPKGEPEFNMKALQAVWDQIMAPSTAAATTSVATDDVHPEVTDIPPAQ", - "protein_translation_length": 498, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3513" - ], - [ - "gene_synonym", - "JW3496" - ], - [ - "gene_synonym", - "NP_417985.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A830" - ], - [ - "gene_synonym", - "GeneID:948039" - ], - [ - "gene_synonym", - "dctA" - ], - [ - "gene_synonym", - "EcoGene:EG20044" - ], - [ - "gene_synonym", - "b3528" - ], - [ - "gene_synonym", - "ASAP:ABE-0011527" - ], - [ - "gene_synonym", - "GI:16131400" - ], - [ - "gene_synonym", - "out" - ] - ], - "dna_sequence": "ATGAAAACCTCTCTGTTTAAAAGCCTTTACTTTCAGGTCCTGACAGCGATAGCCATTGGTATTCTCCTTGGCCATTTCTATCCTGAAATAGGCGAGCAAATGAAACCGCTTGGCGACGGCTTCGTTAAGCTCATTAAGATGATCATCGCTCCTGTCATCTTTTGTACCGTCGTAACGGGCATTGCGGGCATGGAAAGCATGAAGGCGGTCGGTCGTACCGGCGCAGTCGCACTGCTTTACTTTGAAATTGTCAGTACCATCGCGCTGATTATTGGTCTTATCATCGTTAACGTCGTGCAGCCTGGTGCCGGAATGAACGTCGATCCGGCAACGCTTGATGCGAAAGCGGTAGCGGTTTACGCCGATCAGGCGAAAGACCAGGGCATTGTCGCCTTCATTATGGATGTCATCCCGGCGAGCGTCATTGGCGCATTTGCCAGCGGTAACATTCTGCAGGTGCTGCTGTTTGCCGTACTGTTTGGTTTTGCGCTCCACCGTCTGGGCAGCAAAGGCCAACTGATTTTTAACGTCATCGAAAGTTTCTCGCAGGTCATCTTCGGCATCATCAATATGATCATGCGTCTGGCACCTATTGGTGCGTTCGGGGCAATGGCGTTTACCATCGGTAAATACGGCGTCGGCACACTGGTGCAACTGGGGCAGCTGATTATCTGTTTCTACATTACCTGTATCCTGTTTGTGGTGCTGGTATTGGGTTCAATCGCTAAAGCGACTGGTTTCAGTATCTTCAAATTTATCCGCTACATCCGTGAAGAACTGCTGATTGTACTGGGGACTTCATCTTCCGAGTCGGCGCTGCCGCGTATGCTCGACAAGATGGAGAAACTCGGCTGCCGTAAATCGGTGGTGGGGCTGGTCATCCCGACAGGCTACTCGTTTAACCTTGATGGCACATCGATATACCTGACAATGGCGGCGGTGTTTATCGCCCAGGCCACTAACAGTCAGATGGATATCGTCCACCAAATCACGCTGTTAATCGTGTTGCTGCTTTCTTCTAAAGGGGCGGCAGGGGTAACGGGTAGTGGCTTTATCGTGCTGGCGGCGACGCTCTCTGCGGTGGGCCATTTGCCGGTAGCGGGTCTGGCGCTGATCCTCGGTATCGACCGCTTTATGTCAGAAGCTCGTGCGCTGACTAACCTGGTCGGTAACGGCGTAGCGACCATTGTCGTTGCTAAGTGGGTGAAAGAACTGGACCACAAAAAACTGGACGATGTGCTGAATAATCGTGCGCCGGATGGCAAAACGCACGAATTATCCTCTTAA", - "dna_sequence_length": 1287, - "functions": [ - "C4-dicarboxylic acid, orotate and citrate transporter" - ], - "id": "CDS_3465", - "location": [ - [ - "NC_000913", - 3683447, - "-", - 1287 - ] - ], - "md5": "94d546909afbf89bc4ad52875b89dd65", - "parent_gene": "", - "protein_md5": "db885011d46d91b8651a954e01f487be", - "protein_translation": "MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKLIKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPGAGMNVDPATLDAKAVAVYADQAKDQGIVAFIMDVIPASVIGAFASGNILQVLLFAVLFGFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQLGQLIICFYITCILFVVLVLGSIAKATGFSIFKFIRYIREELLIVLGTSSSESALPRMLDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLIVLLLSSKGAAGVTGSGFIVLAATLSAVGHLPVAGLALILGIDRFMSEARALTNLVGNGVATIVVAKWVKELDHKKLDDVLNNRAPDGKTHELSS", - "protein_translation_length": 428, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yhjK" - ], - [ - "gene_synonym", - "ECK3514" - ], - [ - "gene_synonym", - "GI:226524755" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37649" - ], - [ - "gene_synonym", - "JW5943" - ], - [ - "gene_synonym", - "EcoGene:EG12256" - ], - [ - "gene_synonym", - "b3529" - ], - [ - "gene_synonym", - "ASAP:ABE-0011533" - ], - [ - "gene_synonym", - "NP_417986.4" - ], - [ - "gene_synonym", - "GeneID:948048" - ] - ], - "dna_sequence": "TTGCGCGTAAGTCGCTCGTTAACAATCAAGCAGATGGCAATGGTGGCAGCCGTTGTCCTGGTGTTCGTTTTTATTTTTTGCACCGTTTTGCTGTTCCATCTGGTCCAGCAGAATCGCTATAACACGGCTACGCAACTGGAAAGCATTGCTCGCTCTGTCCGCGAACCCTTATCTTCAGCTATTTTGAAAGGCGATATTCCCGAAGCGGAAGCTATTCTTGCCAGCATTAAACCGGCAGGCGTGGTCAGCCGTGCCGATGTAGTGCTGCCTAACCAGTTCCAGGCGCTGCGTAAAAGTTTTATTCCAGAGCGCCCGGTGCCGGTAATGGTTACTCGCCTGTTTGAGCTACCGGTTCAAATCTCGCTGGGCGTTTACTCGCTCGAACGTCCGGCAAACCCGCAGCCAATTGCCTATCTGGTACTACAGGCGGATTCCTTCCGTATGTATAAGTTCGTGATGAGCACCCTCTCAACGTTAGTGACCATTTACTTACTTTTGTCGCTTATCCTGACCGTCGCCATCAGCTGGTGCATTAACCGCCTGATTTTGCATCCGTTACGCAATATTGCTCGCGAACTTAACGCCATCCCAGCCAAGGAGCTTGTTGGTCACCAACTGGCATTACCGCGTCTGCATCAGGACGATGAAATCGGTATGTTGGTGCGCAGTTACAACCTCAACCAGCAATTGCTGCAGCGCCATTATGAAGAACAGAACGAAAATGCGATGCGCTTCCCGGTGTCGGATTTGCCGAACAAAGCCTTGCTGATGGAGATGCTGGAGCAGGTTGTCGCGCGTAAACAAACCACCGCGCTGATGATCATCACCTGTGAAACCCTGCGTGATACTGCGGGCGTGCTGAAAGAGGCGCAACGAGAAATTCTGCTGCTGACGCTGGTGGAAAAACTCAAATCGGTACTGTCGCCACGTATGATCCTCGCGCAGATTAGCGGTTATGACTTTGCTGTCATTGCCAACGGTGTACAGGAACCGTGGCACGCAATCACCTTAGGTCAGCAAGTGCTCACTATCATGAGCGAGCGCCTGCCGATTGAACGTATTCAACTCCGTCCGCACTGTAGCATTGGCGTGGCGATGTTCTACGGCGATCTCACCGCCGAACAGCTTTACAGTCGCGCTATTTCTGCGGCATTTACCGCTCGCCATAAAGGCAAGAATCAGATTCAGTTCTTTGATCCGCAGCAGATGGAAGCCGCCCAGAAGCGGTTGACGGAAGAGAGCGATATCCTTAATGCACTGGAAAATCATCAGTTTGCTATTTGGTTACAGCCACAGGTCGAGATGACCAGCGGTAAACTGGTCAGTGCGGAAGTGTTACTGCGTATCCAGCAACCGGATGGCAGTTGGGACCTGCCGGATGGCTTAATCGATCGCATTGAGTGCTGTGGGCTGATGGTTACCGTCGGTCACTGGGTGCTGGAAGAGTCCTGTCGATTGCTTGCAGCCTGGCAAGAGCGCGGCATTATGCTGCCCTTGTCGGTAAACCTCTCTGCGCTGCAACTGATGCACCCGAATATGGTGGCGGATATGCTGGAACTGTTAACCCGCTATCGCATTCAGCCGGGAACACTGATTCTGGAAGTGACAGAAAGCCGACGTATTGACGACCCTCATGCTGCGGTGGCAATCCTCCGTCCGCTGCGCAATGCCGGAGTTCGGGTGGCGCTGGATGATTTCGGCATGGGCTACGCAGGGCTGCGTCAGCTGCAGCATATGAAATCGTTGCCAATCGACGTACTGAAAATCGACAAAATGTTTGTTGAAGGCTTGCCGGGAGATAGCAGCATGATTGCTGCAATTATCATGCTGGCGCAGAGCCTGAACTTACAAATGATTGCCGAAGGCGTGGAGACTGAAGCACAACGCGACTGGCTGGCAAAAGCGGGCGTTGGTATTGCCCAGGGCTTCCTTTTTGCTCGCCCACTCCCTATTGAAATCTTCGAAGAGAGTTACCTGGAAGAAAAGTAG", - "dna_sequence_length": 1989, - "functions": [ - "cyclic-di-GMP phosphodiesterase" - ], - "id": "CDS_3466", - "location": [ - [ - "NC_000913", - 3685618, - "-", - 1989 - ] - ], - "md5": "4c85e1799f95c2b1c874124f3bcdca60", - "parent_gene": "", - "protein_md5": "f5656441168bce83484e9f284069b027", - "protein_translation": "MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIPERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAKELVGHQLALPRLHQDDEIGMLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHAITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK", - "protein_translation_length": 662, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yhjL" - ], - [ - "gene_synonym", - "ECK3515" - ], - [ - "gene_synonym", - "ASAP:ABE-0011538" - ], - [ - "gene_synonym", - "GI:226524756" - ], - [ - "gene_synonym", - "YP_026226.4" - ], - [ - "gene_synonym", - "b3530" - ], - [ - "gene_synonym", - "bcsC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37650" - ], - [ - "gene_synonym", - "GeneID:948047" - ], - [ - "gene_synonym", - "EcoGene:EG12257" - ], - [ - "gene_synonym", - "JW5942" - ] - ], - "dna_sequence": "ATGCGCAAATTCACACTAAACATATTCACGCTTTCCCTCGGTCTGGCCGTCATGCCGATGGTCGAGGCAGCACCAACCGCTCAGCAACAGTTGCTGGAGCAAGTTCGGTTAGGCGAAGCGACCCATCGTGAAGATCTGGTGCAACAGTCGTTATATCGGCTGGAACTTATTGATCCGAATAACCCGGACGTCGTTGCCGCCCGTTTCCGTTCTTTGTTACGTCAGGGCGATATTGATGGCGCGCAAAAACAGCTCGATCGGCTGTCGCAGTTAGCGCCGAGTTCAAATGCGTATAAATCGTCGCGGACTACGATGCTACTTTCCACGCCGGATGGTCGTCAGGCACTGCAACAGGCACGATTGCAGGCGACGACCGGTCATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATTAATCAGTTAAAACGCATCAATGCGGATGCACCGGGCAATACGGGCCTGCAAAACAATCTGGCGCTATTGCTGTTTAGTAGCGATCGCCGTGACGAAGGTTTTGCCGTCCTGGAACAGATGGCAAAATCGAACGCCGGGCGCGAAGGGGCCTCTAAAATCTGGTACGGGCAGATTAAAGACATGCCCGTCAGTGATGCCAGTGTGTCGGCGCTGAAAAAATATCTCTCGATCTTTAGTGATGGCGATAGCGTGGCGGCTGCGCAATCGCAACTGGCAGAACAGCAAAAACAGCTGGCCGATCCTGCTTTCCGCGCTCGTGCGCAAGGTTTAGCGGCGGTGGACTCTGGTATGGCGGGTAAAGCCATTCCCGAACTACAACAGGCGGTGCGGGCGAACCCGAAAGACAGTGAAGCTCTGGGGGCGCTGGGCCAGGCGTATTCTCAGAAAGGCGATCGCGCCAATGCAGTGGCGAATCTGGAAAAAGCCCTCGCACTGGACCCGCACAGCAGCAACAACGACAAATGGAACAGTCTGCTGAAAGTAAACCGCTACTGGCTGGCGATCCAGCAGGGCGATGCTGCGCTGAAAGCCAATAATCCTGACCGGGCAGAACGCCTGTTCCAGCAGGCGCGTAATGTCGATAACACCGACAGTTATGCAGTGCTGGGGCTGGGCGATGTGGCGATGGCGCGAAAAGATTATCCCGCCGCCGAACGTTATTATCAGCAGACCTTGCGTATGGACAGCGGCAACACTAACGCCGTGCGCGGGCTGGCAAATATTTACCGCCAGCAATCGCCAGAAAAAGCTGAAGCGTTTATCGCCTCGCTCTCTGCCAGTCAGCGGCGTAGCATTGATGATATCGAACGCAGCCTGCAAAACGACCGTCTGGCACAGCAGGCAGAGGCACTGGAAAACCAGGGCAAATGGGCGCAGGCGGCAGCACTTCAGCGGCAACGACTGGCGCTGGACCCCGGCAGCGTATGGATTACTTACCGACTTTCGCAGGATCTCTGGCAGGCCGGACAACGCAGCCAGGCCGATACGTTAATGCGCAATCTGGCGCAGCAGAAGTCGAACGACCCGGAGCAGGTTTACGCTTACGGGCTGTACCTCTCTGGTCATGACCAGGACAGAGCGGCGCTGGCGCATATCAATAGCCTGCCGCGTGCGCAGTGGAACAGCAATATTCAGGAGCTGGTTAATCGACTGCAAAGCGATCAGGTGCTGGAAACCGCTAACCGCCTGCGAGAAAGCGGCAAAGAGGCAGAAGCGGAAGCGATGCTGCGCCAGCAACCACCTTCCACGCGTATTGACCTCACGCTGGCTGACTGGGCGCAACAACGACGTGATTACACCGCCGCCCGCGCTGCATATCAGAATGTCCTGACGCGGGAGCCAGCTAACGCCGACGCCATTCTTGGTCTGACGGAAGTGGATATTGCTGCCGGTGACAAAGCGGCGGCACGTAGCCAGCTGGCGAAACTGCCCGCTACCGATAACGCCTCGCTGAACACACAGCGGCGCGTGGCGCTGGCACAGGCGCAGCTTGGCGATACCGCAGCAGCGCAGCGGACGTTTAATAAGTTGATCCCGCAGGCAAAATCTCAGCCACCGTCGATGGAAAGCGCGATGGTGCTGCGTGATGGTGCGAAGTTTGAAGCGCAGGCGGGCGATCCAACGCAGGCGCTGGAAACCTACAAAGACGCCATGGTCGCATCCGGTGTGACTACGACGCGTCCGCAGGATAACGACACCTTTACCCGACTGACCCGTAACGACGAGAAAGATGACTGGCTGAAACGTGGCGTGCGCAGCGATGCGGCGGACCTCTATCGCCAGCAGGATCTTAACGTCACCCTTGAGCACGATTACTGGGGTTCGAGCGGCACCGGTGGTTACTCCGATCTGAAAGCGCACACTACCATGTTGCAGGTGGATGCGCCGTATTCTGACGGGCGGATGTTCTTTCGCAGTGATTTCGTCAATATGAACGTCGGCAGTTTCTCCACTAATGCCGATGGCAAATGGGATGACAACTGGGGCACCTGTACATTACAGGACTGTAGCGGCAACCGCAGCCAGTCGGATTCCGGTGCCAGCGTGGCGGTCGGCTGGCGAAATGACGTCTGGAGCTGGGATATCGGTACCACGCCGATGGGCTTCAACGTGGTGGATGTGGTCGGCGGCATCAGTTACAGCGATGATATCGGGCCGCTGGGTTACACCGTTAACGCCCACCGTCGGCCCATCTCCAGTTCTTTGCTGGCCTTTGGTGGGCAAAAAGACTCCCCGAGCAATACCGGGAAAAAATGGGGTGGCGTACGTGCCGACGGTGTGGGGCTAAGTCTGAGCTACGATAAAGGTGAAGCAAACGGCGTCTGGGCATCGCTTAGTGGCGACCAGTTAACCGGTAAAAATGTCGAAGATAACTGGCGCGTGCGCTGGATGACGGGCTATTACTATAAGGTCATTAACCAGAACAATCGCCGCGTCACAATCGGCCTGAACAACATGATCTGGCATTACGACAAAGATCTGAGTGGCTACTCACTCGGTCAGGGCGGTTACTACAGTCCGCAGGAATACCTGTCGTTTGCCATACCGGTGATGTGGCGGGAGCGCACGGAAAACTGGTCGTGGGAGCTGGGTGCGTCTGGCTCGTGGTCGCATTCACGCACCAAAACCATGCCGCGTTATCCGCTGATGAATCTGATCCCGACCGACTGGCAGGAAGAAGCTGCGCGGCAATCCAACGATGGCGGCAGCAGTCAGGGCTTCGGCTACACGGCGCGGGCATTACTTGAACGACGTGTTACTTCCAACTGGTTTGTTGGCACGGCAATTGATATCCAGCAGGCGAAAGATTACGCACCCAGCCATTTCCTGCTCTACGTACGTTATTCCGCCGCCGGATGGCAGGGTGACATGGATTTACCGCCGCAGCCGCTGATACCTTACGCCGACTGGTAA", - "dna_sequence_length": 3474, - "functions": [ - "cellulose synthase subunit" - ], - "id": "CDS_3467", - "location": [ - [ - "NC_000913", - 3689173, - "-", - 3474 - ] - ], - "md5": "11c5590384eb8f5a83557ea0f00ff915", - "parent_gene": "", - "protein_md5": "a2cf4e51ab284c2df5700a6623076f93", - "protein_translation": "MRKFTLNIFTLSLGLAVMPMVEAAPTAQQQLLEQVRLGEATHREDLVQQSLYRLELIDPNNPDVVAARFRSLLRQGDIDGAQKQLDRLSQLAPSSNAYKSSRTTMLLSTPDGRQALQQARLQATTGHAEEAVASYNKLFNGAPPEGDIAVEYWSTVAKIPARRGEAINQLKRINADAPGNTGLQNNLALLLFSSDRRDEGFAVLEQMAKSNAGREGASKIWYGQIKDMPVSDASVSALKKYLSIFSDGDSVAAAQSQLAEQQKQLADPAFRARAQGLAAVDSGMAGKAIPELQQAVRANPKDSEALGALGQAYSQKGDRANAVANLEKALALDPHSSNNDKWNSLLKVNRYWLAIQQGDAALKANNPDRAERLFQQARNVDNTDSYAVLGLGDVAMARKDYPAAERYYQQTLRMDSGNTNAVRGLANIYRQQSPEKAEAFIASLSASQRRSIDDIERSLQNDRLAQQAEALENQGKWAQAAALQRQRLALDPGSVWITYRLSQDLWQAGQRSQADTLMRNLAQQKSNDPEQVYAYGLYLSGHDQDRAALAHINSLPRAQWNSNIQELVNRLQSDQVLETANRLRESGKEAEAEAMLRQQPPSTRIDLTLADWAQQRRDYTAARAAYQNVLTREPANADAILGLTEVDIAAGDKAAARSQLAKLPATDNASLNTQRRVALAQAQLGDTAAAQRTFNKLIPQAKSQPPSMESAMVLRDGAKFEAQAGDPTQALETYKDAMVASGVTTTRPQDNDTFTRLTRNDEKDDWLKRGVRSDAADLYRQQDLNVTLEHDYWGSSGTGGYSDLKAHTTMLQVDAPYSDGRMFFRSDFVNMNVGSFSTNADGKWDDNWGTCTLQDCSGNRSQSDSGASVAVGWRNDVWSWDIGTTPMGFNVVDVVGGISYSDDIGPLGYTVNAHRRPISSSLLAFGGQKDSPSNTGKKWGGVRADGVGLSLSYDKGEANGVWASLSGDQLTGKNVEDNWRVRWMTGYYYKVINQNNRRVTIGLNNMIWHYDKDLSGYSLGQGGYYSPQEYLSFAIPVMWRERTENWSWELGASGSWSHSRTKTMPRYPLMNLIPTDWQEEAARQSNDGGSSQGFGYTARALLERRVTSNWFVGTAIDIQQAKDYAPSHFLLYVRYSAAGWQGDMDLPPQPLIPYADW", - "protein_translation_length": 1157, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yhjM" - ], - [ - "gene_synonym", - "ECK3516" - ], - [ - "gene_synonym", - "JW3499" - ], - [ - "gene_synonym", - "bcsZ" - ], - [ - "gene_synonym", - "EcoGene:EG12258" - ], - [ - "gene_synonym", - "NP_417988.1" - ], - [ - "gene_synonym", - "b3531" - ], - [ - "gene_synonym", - "bcsC" - ], - [ - "gene_synonym", - "GeneID:948046" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37651" - ], - [ - "gene_synonym", - "GI:16131403" - ], - [ - "gene_synonym", - "ASAP:ABE-0011541" - ] - ], - "dna_sequence": "ATGAATGTGTTGCGTAGTGGAATCGTGACGATGCTGCTGCTGGCTGCCTTTAGTGTTCAGGCAGCCTGTACCTGGCCTGCCTGGGAGCAGTTTAAAAAGGATTACATCAGTCAGGAAGGGCGCGTCATCGACCCCAGCGACGCGCGCAAAATCACCACCTCCGAAGGGCAAAGTTACGGCATGTTCTCTGCCCTGGCGGCTAACGACCGTGCAGCTTTCGATAATATTCTCGACTGGACGCAGAACAATCTCGCTCAGGGTTCTTTAAAAGAACGTTTGCCCGCCTGGCTGTGGGGCAAGAAAGAGAACAGTAAGTGGGAAGTGCTGGACAGCAATTCGGCCTCCGATGGTGATGTCTGGATGGCCTGGTCGTTGCTGGAGGCGGGGCGTTTGTGGAAAGAGCAGCGTTATACCGACATCGGCAGCGCGTTGCTAAAACGTATCGCGCGGGAGGAAGTGGTGACGGTGCCTGGGCTGGGTTCCATGTTGTTACCGGGCAAAGTGGGTTTTGCTGAGGATAACAGCTGGCGTTTTAACCCCAGCTACCTGCCGCCGACGCTGGCGCAGTATTTCACCCGCTTTGGCGCGCCGTGGACCACGCTGCGCGAAACCAATCAACGTTTATTGCTGGAAACCGCCCCGAAAGGTTTTTCGCCAGACTGGGTGCGCTATGAGAAAGACAAAGGCTGGCAGCTAAAAGCCGAAAAAACATTGATCAGCAGCTACGACGCTATCCGCGTTTACATGTGGGTAGGCATGATGCCTGACAGCGATCCGCAAAAAGCGCGGATGCTCAACCGGTTTAAACCGATGGCGACATTCACTGAGAAAAACGGTTATCCGCCGGAAAAAGTGGATGTGGCTACGGGGAAAGCGCAGGGTAAAGGACCAGTCGGTTTTTCTGCCGCCATGCTGCCCTTTTTACAAAACCGCGATGCGCAGGCCGTTCAGCGCCAGCGCGTGGCCGATAACTTTCCCGGCAGCGATGCCTATTACAACTATGTGCTGACCCTGTTTGGACAAGGCTGGGATCAACACCGTTTCCGCTTCTCGACAAAAGGTGAGTTATTACCTGACTGGGGCCAGGAATGCGCAAATTCACACTAA", - "dna_sequence_length": 1107, - "functions": [ - "endo-1,4-D-glucanase" - ], - "id": "CDS_3468", - "location": [ - [ - "NC_000913", - 3690261, - "-", - 1107 - ] - ], - "md5": "d8793093ea7609ff15bf5f9476e9deec", - "parent_gene": "", - "protein_md5": "7eb98f05ae6512139ad72350ab25dbdf", - "protein_translation": "MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYGMFSALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH", - "protein_translation_length": 368, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yhjN" - ], - [ - "gene_synonym", - "ECK3517" - ], - [ - "gene_synonym", - "GeneID:948045" - ], - [ - "gene_synonym", - "ASAP:ABE-0011545" - ], - [ - "gene_synonym", - "b3532" - ], - [ - "gene_synonym", - "bcsB" - ], - [ - "gene_synonym", - "JW3500" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37652" - ], - [ - "gene_synonym", - "NP_417989.1" - ], - [ - "gene_synonym", - "EcoGene:EG12259" - ], - [ - "gene_synonym", - "GI:16131404" - ] - ], - "dna_sequence": "ATGAAAAGAAAACTATTCTGGATTTGTGCAGTGGCTATGGGGATGAGTGCGTTCCCCTCTTTCATGACGCAGGCGACGCCAGCAACGCAACCACTGATCAATGCTGAGCCAGCTGTAGCCGCCCAGACGGAACAAAATCCGCAGGTGGGGCAAGTGATGCCGGGCGTGCAGGGCGCTGATGCGCCAGTCGTGGCGCAGAACGGTCCTTCGCGTGATGTGAAGCTGACCTTTGCGCAAATTGCACCGCCGCCGGGCAGCATGGTGCTACGTGGCATTAACCCGAACGGCAGCATTGAGTTTGGTATGCGCAGCGATGAAGTGGTGACGAAGGCGATGCTCAACCTCGAATACACCCCATCGCCATCGTTACTGCCTGTCCAGTCGCAGTTAAAGGTTTATCTCAATGATGAACTGATGGGCGTGCTGCCAGTGACCAAAGAACAGTTGGGTAAAAAAACGCTGGCGCAAATGCCCATTAACCCACTGTTTATTAGCGACTTCAACCGTGTACGGCTGGAGTTTGTCGGCCATTATCAGGACGTGTGCGAAAAACCGGCCAGCACCACGCTTTGGCTGGATGTTGGGCGGAGCAGTGGACTGGATCTGACCTATCAGACCCTGAATGTGAAGAATGACCTGTCACACTTCCCGGTGCCATTCTTTGACCCGAGCGATAACCGCACCAACACCTTGCCGATGGTCTTTGCGGGTGCGCCGGATGTTGGGCTGCAACAAGCCTCTGCCATTGTCGCCTCGTGGTTTGGTTCGCGTTCTGGCTGGCGTGGGCAGAACTTCCCGGTACTCTATAACCAACTGCCGGATCGCAATGCCATTGTCTTTGCAACCAACGACAAACGGCCGGACTTCCTGCGCGATCATCCGGCGGTAAAAGCCCCGGTGATTGAGATGATTAACCATCCGCAGAATCCTTACGTCAAACTGCTGGTGGTGTTTGGTCGTGACGACAAAGACCTGTTGCAGGCAGCGAAAGGTATCGCTCAGGGTAACATTCTGTTCCGTGGTGAAAGCGTGGTAGTGAATGAAGTGAAACCGCTGCTACCGCGTAAGCCGTACGATGCGCCGAACTGGGTACGTACCGATCGTCCGGTCACATTTGGCGAACTGAAAACCTATGAAGAACAGTTACAATCCAGCGGTCTTGAGCCAGCAGCGATTAACGTTTCGCTAAACCTGCCGCCGGATCTCTACCTGATGCGCAGTACCGGCATTGATATGGATATTAATTACCGCTACACCATGCCGCCGGTGAAAGACAGTTCGCGGATGGATATCAGCCTGAATAACCAGTTCCTGCAATCCTTCAACCTGAGCAGCAAACAGGAGGCGAACCGCCTGCTGCTGCGGATTCCGGTATTACAAGGTTTGCTGGATGGCAAAACAGATGTCTCTATTCCGGCGCTGAAACTGGGCGCGACCAACCAGCTGCGCTTCGACTTTGAGTATATGAACCCGATGCCGGGCGGTTCGGTGGATAACTGTATTACCTTCCAGCCGGTGCAGAATCATGTGGTGATTGGTGACGACTCCACCATCGACTTCTCGAAGTATTACCACTTCATCCCGATGCCGGATCTACGCGCCTTTGCTAACGCGGGCTTCCCATTCAGCCGGATGGCGGATCTGTCGCAAACCATCACCGTGATGCCGAAAGCGCCTAACGAAGCACAGATGGAAACGTTGCTGAATACTGTTGGTTTTATCGGCGCACAGACGGGCTTCCCGGCGATTAATCTGACGGTGACCGATGATGGCAGCACCATTCAGGGCAAAGATGCCGACATCATGATCATCGGTGGTATCCCGGACAAACTGAAAGACGATAAGCAGATCGACCTATTGGTGCAGGCGACCGAAAGCTGGGTGAAAACACCGATGCGCCAGACCCCGTTCCCCGGCATTGTGCCGGACGAGAGCGATCGCGCGGCAGAAACCCGGTCAACGCTGACCTCTTCCGGTGCGATGGCGGCGGTGATTGGCTTCCAGTCGCCGTATAACGACCAGCGCAGCGTGATTGCGCTGTTGGCAGATAGCCCACGCGGTTATGAAATGCTTAACGATGCGGTGAACGATAGCGGCAAACGCGCCACCATGTTCGGTTCGGTCGCGGTGATCCGCGAGTCCGGTATCAACAGCCTACGTGTTGGCGACGTTTATTACGTAGGTCATCTGCCGTGGTTCGAGCGCGTGTGGTATGCGCTGGCAAACCATCCGATTCTGCTGGCGGTGCTGGCGGCTATCAGTGTGATATTGCTGGCATGGGTACTGTGGCGTCTGCTGCGAATTATTAGTCGTCGTCGTCTTAACCCGGATAACGAGTAA", - "dna_sequence_length": 2340, - "functions": [ - "regulator of cellulose synthase, cyclic di-GMP binding" - ], - "id": "CDS_3469", - "location": [ - [ - "NC_000913", - 3692607, - "-", - 2340 - ] - ], - "md5": "1b75c0623039eefd1160a82e1de315b8", - "parent_gene": "", - "protein_md5": "f2a31ba4537d45216285d2c08005814a", - "protein_translation": "MKRKLFWICAVAMGMSAFPSFMTQATPATQPLINAEPAVAAQTEQNPQVGQVMPGVQGADAPVVAQNGPSRDVKLTFAQIAPPPGSMVLRGINPNGSIEFGMRSDEVVTKAMLNLEYTPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQMPINPLFISDFNRVRLEFVGHYQDVCEKPASTTLWLDVGRSSGLDLTYQTLNVKNDLSHFPVPFFDPSDNRTNTLPMVFAGAPDVGLQQASAIVASWFGSRSGWRGQNFPVLYNQLPDRNAIVFATNDKRPDFLRDHPAVKAPVIEMINHPQNPYVKLLVVFGRDDKDLLQAAKGIAQGNILFRGESVVVNEVKPLLPRKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAAINVSLNLPPDLYLMRSTGIDMDINYRYTMPPVKDSSRMDISLNNQFLQSFNLSSKQEANRLLLRIPVLQGLLDGKTDVSIPALKLGATNQLRFDFEYMNPMPGGSVDNCITFQPVQNHVVIGDDSTIDFSKYYHFIPMPDLRAFANAGFPFSRMADLSQTITVMPKAPNEAQMETLLNTVGFIGAQTGFPAINLTVTDDGSTIQGKDADIMIIGGIPDKLKDDKQIDLLVQATESWVKTPMRQTPFPGIVPDESDRAAETRSTLTSSGAMAAVIGFQSPYNDQRSVIALLADSPRGYEMLNDAVNDSGKRATMFGSVAVIRESGINSLRVGDVYYVGHLPWFERVWYALANHPILLAVLAAISVILLAWVLWRLLRIISRRRLNPDNE", - "protein_translation_length": 779, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yhjO" - ], - [ - "gene_synonym", - "b3533" - ], - [ - "gene_synonym", - "ECK3518" - ], - [ - "gene_synonym", - "ASAP:ABE-0011547" - ], - [ - "gene_synonym", - "GI:90111609" - ], - [ - "gene_synonym", - "bcsA" - ], - [ - "gene_synonym", - "GeneID:948053" - ], - [ - "gene_synonym", - "JW5665" - ], - [ - "gene_synonym", - "EcoGene:EG12260" - ], - [ - "gene_synonym", - "NP_417990.4" - ], - [ - "gene_synonym", - "yhjP" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37653" - ] - ], - "dna_sequence": "ATGAGTATCCTGACCCGGTGGTTGCTTATCCCGCCGGTCAACGCGCGGCTTATCGGGCGTTATCGCGATTATCGTCGTCACGGTGCGTCGGCTTTCAGCGCGACGCTCGGCTGTTTCTGGATGATCCTGGCCTGGATTTTTATTCCGCTGGAGCACCCGCGCTGGCAGCGTATTCGCGCAGAACATAAAAACCTGTATCCGCATATCAACGCCTCGCGTCCGCGTCCGCTGGACCCGGTCCGTTATCTCATTCAAACATGCTGGTTATTGATCGGTGCATCGCGCAAAGAAACGCCGAAACCGCGCAGGCGGGCATTTTCAGGTCTGCAAAATATTCGTGGACGTTACCATCAATGGATGAACGAGCTGCCTGAGCGCGTTAGCCATAAAACACAGCATCTGGATGAGAAAAAAGAGCTCGGTCATTTGAGTGCCGGGGCGCGGCGGTTGATCCTCGGTATCATCGTCACCTTCTCGCTGATTCTGGCGTTAATCTGCGTTACTCAGCCGTTTAACCCGCTGGCGCAGTTTATCTTCCTGATGCTGCTGTGGGGGGTAGCGCTGATCGTACGGCGGATGCCGGGGCGCTTCTCGGCGCTAATGTTGATTGTGCTGTCGCTGACCGTTTCTTGCCGTTATATCTGGTGGCGTTACACCTCTACGCTGAACTGGGACGATCCGGTCAGCCTGGTGTGCGGGCTTATTCTGCTCTTCGCTGAAACGTACGCGTGGATTGTGCTGGTGCTCGGCTACTTCCAGGTAGTATGGCCGCTGAATCGTCAGCCGGTGCCATTGCCGAAAGATATGTCGCTGTGGCCGTCGGTGGATATCTTTGTCCCGACTTACAACGAAGATCTCAACGTGGTGAAAAATACCATTTACGCCTCGCTGGGTATCGACTGGCCGAAAGATAAGCTGAATATCTGGATCCTTGATGACGGCGGCAGGGAAGAGTTTCGCCAGTTTGCGCAAAACGTGGGGGTGAAATATATCGCCCGCACCACTCATGAACATGCGAAAGCAGGCAACATCAACAATGCGCTGAAATATGCCAAAGGCGAGTTCGTGTCGATTTTCGACTGCGACCACGTACCAACGCGATCGTTCTTGCAAATGACCATGGGCTGGTTCCTGAAAGAAAAACAGCTGGCGATGATGCAGACGCCGCACCACTTCTTCTCACCGGACCCGTTTGAACGCAACCTGGGGCGTTTCCGTAAAACGCCGAACGAAGGCACGCTGTTCTATGGTCTGGTGCAGGATGGCAACGATATGTGGGACGCCACTTTCTTCTGCGGTTCCTGTGCGGTGATTCGTCGTAAGCCGCTGGATGAAATTGGCGGCATTGCTGTCGAAACCGTGACTGAAGATGCGCATACTTCTCTGCGGTTGCACCGTCGTGGCTATACCTCCGCGTATATGCGTATTCCGCAGGCGGCGGGGCTGGCGACCGAAAGTCTGTCGGCGCATATCGGTCAGCGTATTCGCTGGGCGCGCGGGATGGTACAAATCTTCCGTCTCGATAACCCGCTCACCGGTAAAGGGCTGAAGTTTGCTCAGCGGCTATGTTACGTCAACGCCATGTTCCACTTCTTGTCGGGCATTCCACGGCTGATCTTCCTGACTGCGCCGCTGGCGTTCCTGCTGCTTCATGCCTACATCATCTATGCGCCAGCGTTGATGATCGCCCTATTCGTGCTGCCGCATATGATCCATGCCAGCCTGACCAACTCCAAGATCCAGGGCAAATATCGCCACTCTTTCTGGAGTGAAATCTACGAAACGGTGCTGGCGTGGTATATCGCACCACCGACGCTGGTGGCGCTGATTAACCCGCACAAAGGCAAATTTAACGTCACCGCCAAAGGTGGACTGGTGGAAGAAGAGTACGTCGACTGGGTGATCTCGCGGCCCTACATCTTCCTTGTCCTGCTCAACCTGGTGGGCGTTGCGGTAGGCATCTGGCGCTACTTCTATGGCCCGCCAACCGAGATGCTCACCGTGGTCGTCAGTATGGTGTGGGTGTTCTACAACCTGATTGTTCTTGGCGGCGCAGTTGCGGTATCGGTAGAAAGCAAACAGGTACGCCGATCGCACCGCGTGGAGATGACGATGCCCGCGGCAATTGCCCGCGAAGATGGTCACCTCTTCTCGTGTACCGTTCAGGATTTCTCCGACGGTGGTTTGGGGATCAAGATCAACGGTCAGGCGCAGATTCTGGAAGGGCAGAAAGTGAATCTGTTGCTTAAACGCGGTCAGCAGGAATACGTCTTCCCGACCCAGGTGGCGCGCGTGATGGGTAATGAAGTTGGGCTGAAATTAATGCCGCTCACCACCCAGCAACATATCGATTTTGTGCAGTGTACGTTTGCCCGTGCGGATACATGGGCGCTCTGGCAGGACAGCTACCCGGAAGATAAGCCGCTGGAAAGTCTGCTGGATATTCTGAAGCTCGGCTTCCGTGGCTACCGCCATCTGGCGGAGTTTGCGCCTTCTTCGGTGAAGGGCATATTCCGTGTGCTGACTTCTCTGGTTTCCTGGGTTGTATCGTTTATTCCGCGCCGCCCGGAGCGGAGCGAAACGGCACAACCATCGGATCAGGCTTTGGCTCAACAATGA", - "dna_sequence_length": 2619, - "functions": [ - "cellulose synthase, catalytic subunit" - ], - "id": "CDS_3470", - "location": [ - [ - "NC_000913", - 3695236, - "-", - 2619 - ] - ], - "md5": "838ddc2c43eb35e22461afb85eafee5c", - "parent_gene": "", - "protein_md5": "3a933a9a1983667b0c9aa7ab83f83c9b", - "protein_translation": "MSILTRWLLIPPVNARLIGRYRDYRRHGASAFSATLGCFWMILAWIFIPLEHPRWQRIRAEHKNLYPHINASRPRPLDPVRYLIQTCWLLIGASRKETPKPRRRAFSGLQNIRGRYHQWMNELPERVSHKTQHLDEKKELGHLSAGARRLILGIIVTFSLILALICVTQPFNPLAQFIFLMLLWGVALIVRRMPGRFSALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVPLPKDMSLWPSVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQNVGVKYIARTTHEHAKAGNINNALKYAKGEFVSIFDCDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIAVETVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIRWARGMVQIFRLDNPLTGKGLKFAQRLCYVNAMFHFLSGIPRLIFLTAPLAFLLLHAYIIYAPALMIALFVLPHMIHASLTNSKIQGKYRHSFWSEIYETVLAWYIAPPTLVALINPHKGKFNVTAKGGLVEEEYVDWVISRPYIFLVLLNLVGVAVGIWRYFYGPPTEMLTVVVSMVWVFYNLIVLGGAVAVSVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEGQKVNLLLKRGQQEYVFPTQVARVMGNEVGLKLMPLTTQQHIDFVQCTFARADTWALWQDSYPEDKPLESLLDILKLGFRGYRHLAEFAPSSVKGIFRVLTSLVSWVVSFIPRRPERSETAQPSDQALAQQ", - "protein_translation_length": 872, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "bcsQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0011549" - ], - [ - "gene_synonym", - "ECK3519" - ], - [ - "gene_synonym", - "JW5941" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37655" - ], - [ - "gene_synonym", - "GeneID:948052" - ], - [ - "gene_synonym", - "b3534" - ], - [ - "gene_synonym", - "EcoGene:EG12261" - ], - [ - "gene_synonym", - "yhjQ" - ] - ], - "dna_sequence": "ATGGCCGTACTGGGATAGCAGGGGGTGCGGGGAGGCGTGGGGACAACAACCATCACCGCCGCATTAGCCTGGTCATTACAAATGTTGGGAGAAAATGTCCTGGTGGTCGATGCCTGCCCGGACAACTTGTTGCGCCTGTCATTTAATGTTGATTTTACCCACCGTCAGGGCTGGGCCAGAGCGATGCTGGATGGCCAGGACTGGCGTGACGCTGGGTTGCGCTACACCTCGCAGCTCGATTTGCTGCCTTTTGGTCAGTTATCCATTGAAGAACAAGAAAATCCACAGCACTGGCAAACCCGGCTGAGCGATATTTGCTCCGGCTTACAGCAACTAAAAGCCAGCGGGCGTTACCAGTGGATTTTAATCGACTTACCGCGTGATGCCTCGCAGATAACCCACCAGCTGCTGAGTTTGTGCGATCACTCGCTGGCAATCGTCAATGTGGATGCCAACTGCCATATCCGACTGCATCAGCAAGCGCTGCCGGATGGCGCACATATTTTGATTAATGACTTCCGTATTGGCAGTCAGGTTCAGGACGATATTTACCAGCTTTGGTTGCAAAGCCAGCGCCGATTACTGCCGATGCTCATTCATCGTGATGAAGCGATGGCTGAATGCCTGGCGGCTAAGCAACCAGTAGGTGAATATCGCAGTGATGCGCTGGCGGCTGAAGAGATACTGACGCTGGCGAACTGGTGCCTGTTGAACTACTCCGGGCTGAAAACGCCAGTCGGGAGTGCATCATGA", - "dna_sequence_length": 753, - "id": "CDS_3471", - "location": [ - [ - "NC_000913", - 3695985, - "-", - 753 - ] - ], - "md5": "4d04dd3d8567e2f48340336f6252dd32", - "parent_gene": "", - "protein_md5": "1d6bea9395764fe5347127a1d64541c2", - "protein_translation": "MAVLG", - "protein_translation_length": 5, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011551" - ], - [ - "gene_synonym", - "ECK3520" - ], - [ - "gene_synonym", - "NP_417992.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADJ3" - ], - [ - "gene_synonym", - "JW3503" - ], - [ - "gene_synonym", - "EcoGene:EG12262" - ], - [ - "gene_synonym", - "GeneID:948051" - ], - [ - "gene_synonym", - "b3535" - ], - [ - "gene_synonym", - "GI:16131407" - ], - [ - "gene_synonym", - "yhjR" - ] - ], - "dna_sequence": "ATGAATAACAATGAACCAGATACTCTGCCTGATCCCGCGATAGGCTATATCTTCCAGAATGATATTGTGGCGTTAAAGCAGGCATTTTCACTGCCTGATATTGATTATGCCGATATTTCCCAACGCGAACAGTTGGCCGCGGCATTAAAACGCTGGCCGTTGCTGGCAGAGTTTGCGCAACAAAAGTAG", - "dna_sequence_length": 189, - "functions": [ - "DUF2629 family protein" - ], - "id": "CDS_3472", - "location": [ - [ - "NC_000913", - 3696185, - "-", - 189 - ] - ], - "md5": "c41717518bb9ab73e04d18ccdf71af67", - "parent_gene": "", - "protein_md5": "3182779ec3aa941370f3cd412da99001", - "protein_translation": "MNNNEPDTLPDPAIGYIFQNDIVALKQAFSLPDIDYADISQREQLAAALKRWPLLAEFAQQK", - "protein_translation_length": 62, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_417993.1" - ], - [ - "gene_synonym", - "ECK3521" - ], - [ - "gene_synonym", - "ASAP:ABE-0011554" - ], - [ - "gene_synonym", - "GeneID:948050" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37657" - ], - [ - "gene_synonym", - "GI:16131408" - ], - [ - "gene_synonym", - "b3536" - ], - [ - "gene_synonym", - "bcsE" - ], - [ - "gene_synonym", - "JW3504" - ], - [ - "gene_synonym", - "yhjS" - ], - [ - "gene_synonym", - "EcoGene:EG12263" - ] - ], - "dna_sequence": "ATGAGGGACATTGTGGACCCTGTATTCTCTATCGGTATCTCATCATTATGGGATGAGCTGCGACATATGCCAGCAGGCGGCGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCGCACACGTCGCGGTCATTAGCATGGACAGCGATCCGGCGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGGAAAAAATAAAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGACCCGTGATTTGCAGTGTTCTATTGATCCCCATAATTACCTTTTTATTCTTGTTTGCGCAAATAACGCATGGCAAAACATTCCTGCCGAGCGGCTTCGCTCATGGTTGGATAAAATGAATAAATGGAGCAGGTTAAACCATTGTTCGCTTTTGGTAATTAATCCCGGAAATAATAACGATAAACAATTTTCATTGTTGCTTGAGGAATACCGTTCACTTTTTGGTCTTGCCAGTTTGCGTTTTCAGGGTGACCAACATTTGCTGGATATTGCCTTCTGGTGCAACGAAAAAGGGGTCAGCGCCCGTCAGCAGCTTAGCGTTCAGCAACAAAATGGTATCTGGACATTAGTTCAAAGCGAAGAGGCGGAGATCCAACCACGCAGCGACGAAAAACGCATTCTGAGTAATGTTGCTGTACTGGAAGGTGCGCCGCCGCTATCGGAACACTGGCAACTGTTCAACAATAACGAAGTCCTGTTCAATGAAGCCCGTACCGCTCAGGCGGCGACGGTGGTCTTTTCTTTACAGCAAAATGCGCAAATCGAGCCACTGGCCCGCAGCATTCATACCCTGCGTCGCCAGCGCGGTAGTGCGATGAAAATCCTCGTGCGGGAAAATACCGCTAGCCTGCGCGCCACCGATGAACGTTTGTTATTGGCCTGCGGTGCAAATATGGTTATTCCGTGGAATGCGCCACTCTCCCGTTGTCTGACGATGATCGAAAGCGTGCAAGGGCAGAAGTTTAGTCGCTATGTGCCGGAAGATATCACTACCTTGCTGTCAATGACCCAGCCGCTCAAACTGCGTGGTTTCCAGAAGTGGGATGTGTTCTGTAATGCCGTCAACAACATGATGAATAACCCTCTATTACCTGCCCACGGTAAAGGCGTTCTGGTTGCCCTACGTCCGGTACCGGGTATCCGCGTTGAACAAGCCCTGACGCTGTGTCGCCCTAACCGTACCGGCGATATCATGACCATTGGCGGTAATCGGCTGGTGCTGTTTCTCTCATTCTGTCGGATTAACGATCTGGATACCGCGTTGAATCATATTTTCCCATTGCCTACTGGCGACATTTTCTCAAACCGTATGGTCTGGTTTGAAGATGATCAAATCAGTGCCGAGCTGGTGCAGATGCGCTTGCTTGCCCCAGAACAATGGGGCATGCCGCTGCCTTTAACGCAAAGTTCTAAACCGGTCATCAATGCCGAGCACGATGGTCGCCACTGGCGACGAATACCAGAACCCATGCGACTGTTAGATGATGCTGTGGAGCGCTCATCATGA", - "dna_sequence_length": 1572, - "functions": [ - "cellulose production protein" - ], - "id": "CDS_3473", - "location": [ - [ - "NC_000913", - 3696458, - "+", - 1572 - ] - ], - "md5": "2c1073f3f04e1f33266c486ba23eb4c9", - "parent_gene": "", - "protein_md5": "e6e290341d850c93d35ca225f5dbd8b2", - "protein_translation": "MRDIVDPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLANQTIASQAETAHVAVISMDSDPAKIFQLDDSQGPEKIKLFSMLNHEKGLYYLTRDLQCSIDPHNYLFILVCANNAWQNIPAERLRSWLDKMNKWSRLNHCSLLVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANMVIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS", - "protein_translation_length": 523, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948059" - ], - [ - "gene_synonym", - "ECK3522" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADJ5" - ], - [ - "gene_synonym", - "ASAP:ABE-0011556" - ], - [ - "gene_synonym", - "EcoGene:EG12264" - ], - [ - "gene_synonym", - "JW5663" - ], - [ - "gene_synonym", - "b3537" - ], - [ - "gene_synonym", - "bcsF" - ], - [ - "gene_synonym", - "NP_417994.2" - ], - [ - "gene_synonym", - "yhjT" - ], - [ - "gene_synonym", - "GI:90111610" - ] - ], - "dna_sequence": "ATGATGACCATCAGCGATATCATTGAAATTATTGTCGTTTGCGCACTGATATTTTTCCCGCTGGGCTATCTGGCGCGGCACTCTTTGCGACGCATTCGCGACACCTTACGTTTGTTCTTTGCTAAACCTCGTTATGTTAAACCGGCCGGGACGTTACGCCGCACGGAAAAAGCCAGGGCAACCAAAAAATGA", - "dna_sequence_length": 192, - "functions": [ - "DUF2636 family cellulose production small membrane protein" - ], - "id": "CDS_3474", - "location": [ - [ - "NC_000913", - 3698026, - "+", - 192 - ] - ], - "md5": "a58b47d10a58c9618e4195c7070d564d", - "parent_gene": "", - "protein_md5": "2e6477a5828faa4bb31e32492e007a94", - "protein_translation": "MMTISDIIEIIVVCALIFFPLGYLARHSLRRIRDTLRLFFAKPRYVKPAGTLRRTEKARATKK", - "protein_translation_length": 63, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011558" - ], - [ - "gene_synonym", - "ECK3523" - ], - [ - "gene_synonym", - "GI:16131410" - ], - [ - "gene_synonym", - "EcoGene:EG12265" - ], - [ - "gene_synonym", - "JW3506" - ], - [ - "gene_synonym", - "bcsG" - ], - [ - "gene_synonym", - "yhjU" - ], - [ - "gene_synonym", - "b3538" - ], - [ - "gene_synonym", - "GeneID:948058" - ], - [ - "gene_synonym", - "NP_417995.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37659" - ] - ], - "dna_sequence": "ATGACTCAATTTACGCAAAATACCGCCATGCCTTCTTCCCTCTGGCAATACTGGCGCGGCCTTTCCGGCTGGAACTTCTATTTTCTGGTTAAGTTCGGCCTGTTGTGGGCGGGATATCTTAACTTCCATCCGCTCCTCAATTTGGTGTTTGCCGCGTTTCTGCTGATGCCCCTTCCGCGCTACAGCCTGCATCGCTTGCGCCACTGGATTGCCCTGCCGATCGGCTTTGCTTTGTTCTGGCATGACACCTGGTTGCCTGGCCCGGAAAGCATAATGAGCCAGGGTTCGCAGGTGGCGGGGTTCAGTACCGATTATTTAATCGACCTTGTCACACGCTTTATTAACTGGCAGATGATTGGGGCCATTTTTGTTTTATTAGTGGCCTGGTTATTCCTGTCACAATGGATTCGCATTACCGTTTTTGTGGTTGCCATACTGCTATGGCTGAACGTACTTACCCTGGCGGGACCAAGTTTCTCCTTGTGGCCAGCCGGACAACCGACGACCACTGTAACAACGACGGGTGGTAACGCAGCGGCAACCGTTGCGGCGACGGGTGGCGCACCGGTAGTGGGTGATATGCCCGCACAAACTGCACCGCCAACAACGGCGAACCTTAACGCCTGGCTGAATAATTTCTATAACGCGGAGGCGAAACGTAAATCGACCTTCCCGTCTTCGCTGCCCGCTGATGCTCAGCCATTTGAACTACTGGTGATTAACATCTGTTCGCTTTCCTGGTCGGATATAGAAGCCGCCGGGTTGATGTCGCATCCACTGTGGTCGCATTTCGATATTGAGTTCAAGAACTTTAACTCCGCCACCTCCTACAGTGGCCCGGCGGCGATCCGTTTACTGCGCGCCAGCTGCGGGCAGACTTCGCACACTAATCTGTATCAACCGGCAAATAACGACTGCTATCTGTTTGATAACCTTTCGAAACTGGGCTTTACCCAGCACCTGATGATGGGACATAACGGCCAGTTCGGCGGTTTTTTGAAAGAAGTTCGCGAAAATGGCGGCATGCAGAGCGAATTGATGGATCAAACAAATCTGCCGGTTATTTTGCTGGGCTTTGATGGTTCGCCGGTTTATGACGATACCGCTGTGCTTAACCGCTGGCTGGACGTTACCGAAAAAGATAAAAACAGCCGTAGTGCCACGTTCTACAACACGCTTCCACTGCATGACGGCAACCATTATCCGGGGGTCAGCAAAACAGCGGATTACAAAGCGCGGGCGCAGAAATTCTTTGATGAACTGGACGCCTTCTTTACTGAACTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTCACCAGTGGGTTGCCACAAACAGCACCGGTCTCCGAGAACTCAAATGCAGTAGTTATTCAATACCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAA", - "dna_sequence_length": 1680, - "functions": [ - "DUF3260 family cellulose production inner membrane protein" - ], - "id": "CDS_3475", - "location": [ - [ - "NC_000913", - 3698214, - "+", - 1680 - ] - ], - "md5": "369809cf1a3fe2476081de301f11e1c3", - "parent_gene": "", - "protein_md5": "3d8b03e439b3927ee39c8eee7feb29ea", - "protein_translation": "MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHPLLNLVFAAFLLMPLPRYSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFSTDYLIDLVTRFINWQMIGAIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFSLWPAGQPTTTVTTTGGNAAATVAATGGAPVVGDMPAQTAPPTTANLNAWLNNFYNAEAKRKSTFPSSLPADAQPFELLVINICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATSYSGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLKEVRENGGMQSELMDQTNLPVILLGFDGSPVYDDTAVLNRWLDVTEKDKNSRSATFYNTLPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGDRMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIEQPSSFLAISDLVVRVLDGKIFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ", - "protein_translation_length": 559, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0047284" - ], - [ - "gene_synonym", - "EcoGene:EG14406" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q6BF25" - ], - [ - "gene_synonym", - "GeneID:2847730" - ], - [ - "gene_synonym", - "ECK3524" - ], - [ - "gene_synonym", - "b4453" - ], - [ - "gene_synonym", - "YP_026227.1" - ], - [ - "gene_synonym", - "GI:49176368" - ], - [ - "gene_synonym", - "ldrD" - ], - [ - "gene_synonym", - "JW5966" - ] - ], - "dna_sequence": "ATGACGTTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGCGGCTCCGGTCATTGCTGGCATTCTTGCCAGTATGATCGTGAACTGGCTGAACAAGCGGAAGTAA", - "dna_sequence_length": 108, - "functions": [ - "toxic polypeptide, small" - ], - "id": "CDS_3476", - "location": [ - [ - "NC_000913", - 3700087, - "-", - 108 - ] - ], - "md5": "38c3f12deb4a5718479ab485a05c30b2", - "parent_gene": "", - "protein_md5": "311aecf1c44bf620420d5934951323ee", - "protein_translation": "MTFAELGMAFWHDLAAPVIAGILASMIVNWLNKRK", - "protein_translation_length": 35, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948057" - ], - [ - "gene_synonym", - "yhjV" - ], - [ - "gene_synonym", - "JW3508" - ], - [ - "gene_synonym", - "NP_417996.1" - ], - [ - "gene_synonym", - "ECK3526" - ], - [ - "gene_synonym", - "EcoGene:EG12266" - ], - [ - "gene_synonym", - "ASAP:ABE-0011562" - ], - [ - "gene_synonym", - "GI:16131411" - ], - [ - "gene_synonym", - "b3539" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37660" - ] - ], - "dna_sequence": "ATGCAGCACAACACACTATCGAAACACAATCAGAAATTGCCGTTTACACGCTACGACTTCGGCTGGGTTTTATTATGCATAGGCATGGCGATTGGTGCCGGAACCGTGCTGATGCCAGTACAAATTGGCTTGAAGGGAATTTGGGTATTTATTACCGCAGCGATCATTGCTTATCCTGCCACCTGGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAACTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGCGCCTCGTACCTGAAAACCTTCGGTTTAACCGATGCCGATCTTTCACAATCTCTACTTTATAAAGTCGCTATTTTCGCCGTACTGGTGGCGATTGCGTCTGGTGGTGAACGATTACTGTTTAAGATTTCCGGGCCAATGGTGGTGGTCAAAGTAGGGATTATTGTCGTGTTCGGTTTTGCGATGATCCCGCACTGGAATTTCGCCAATATAACCGCCTTCCCGCAAGCCTCCGTCTTTTTCCGCGATGTCTTGCTTACCATTCCATTTTGCTTCTTTTCTGCAGTATTTATTCAGGTACTTAACCCAATGAATATTGCCTATCGTAAACGGGAAGCGGATAAAGTACTGGCAACCCGGCTCGCGCTGCGTACCCACCGAATTAGTTATATCACGCTCATCGCGGTGATCCTGTTTTTTGCCTTTTCGTTTACCTTCTCAATTAGCCACGAAGAAGCCGTTTCTGCCTTTGAACAAAATATCTCAGCACTGGCGCTGGCCGCGCAGGTGATCCCTGGGCATATCATTCATATCACCTCTACGGTGCTTAATATCTTTGCCGTACTGACCGCATTCTTTGGCATTTATCTCGGTTTCCACGAGGCCATTAAAGGCATTATTCTCAATCTGTTAAGCCGAATTATTGATACCAAGAAAATTAACTCACGCGTGCTGACTCTGGCGATCTGCGCTTTTATCGTCATTACGTTGACGATTTGGGTTTCGTTTCGTGTATCGGTGCTGGTGTTCTTTCAGTTGGGAAGCCCGTTATATGGTATTGTGTCGTGCCTCATTCCGTTTTTCCTGATCTATAAAGTCGCACAACTGGAAAAACTTCGCGGATTTAAAGCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAA", - "dna_sequence_length": 1272, - "functions": [ - "putative transporter" - ], - "id": "CDS_3477", - "location": [ - [ - "NC_000913", - 3700563, - "+", - 1272 - ] - ], - "md5": "34aacb7f2ca4c5dded6d3b20e4a6205b", - "parent_gene": "", - "protein_md5": "5156e2693333cb24f42b9d8757472f75", - "protein_translation": "MQHNTLSKHNQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGLKGIWVFITAAIIAYPATWVVQDIYLKTLSESDSCNDYTDIISHYLGKNWGIFLGVIYFLMIIHGIFIYSLSVVFDSASYLKTFGLTDADLSQSLLYKVAIFAVLVAIASGGERLLFKISGPMVVVKVGIIVVFGFAMIPHWNFANITAFPQASVFFRDVLLTIPFCFFSAVFIQVLNPMNIAYRKREADKVLATRLALRTHRISYITLIAVILFFAFSFTFSISHEEAVSAFEQNISALALAAQVIPGHIIHITSTVLNIFAVLTAFFGIYLGFHEAIKGIILNLLSRIIDTKKINSRVLTLAICAFIVITLTIWVSFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKVAQLEKLRGFKAWLILLYGILLCLSPLLKLIE", - "protein_translation_length": 423, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12628" - ], - [ - "gene_synonym", - "b3540" - ], - [ - "gene_synonym", - "NP_417997.1" - ], - [ - "gene_synonym", - "ECK3527" - ], - [ - "gene_synonym", - "dppF" - ], - [ - "gene_synonym", - "GeneID:948056" - ], - [ - "gene_synonym", - "ASAP:ABE-0011564" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37313" - ], - [ - "gene_synonym", - "GI:16131412" - ], - [ - "gene_synonym", - "JW3509" - ] - ], - "dna_sequence": "ATGAGTACGCAAGAGGCCACCCTGCAACAACCGCTGTTGCAGGCTATCGACCTGAAAAAACATTATCCGGTGAAGAAAGGCATGTTCGCGCCGGAACGTCTGGTTAAAGCGCTGGATGGCGTTTCGTTTAACCTTGAACGTGGCAAAACGCTGGCAGTAGTGGGCGAATCTGGCTGCGGTAAATCGACCCTCGGTCGGTTGCTGACGATGATTGAAATGCCCACCGGTGGCGAGCTGTATTACCAGGGGCAGGATCTGCTTAAGCACGATCCGCAGGCGCAGAAGCTGCGTCGGCAGAAAATCCAGATCGTCTTCCAGAACCCTTACGGTTCGCTGAATCCGCGTAAAAAAGTCGGGCAAATTCTTGAAGAGCCGCTGCTGATCAACACCAGCTTAAGCAAAGAACAGCGTCGGGAAAAAGCCCTGTCGATGATGGCGAAAGTCGGCCTGAAAACCGAGCACTATGACCGCTATCCGCATATGTTCTCCGGCGGTCAGCGTCAGCGTATCGCCATCGCCCGTGGTCTGATGCTCGACCCGGATGTGGTGATTGCCGATGAACCGGTTTCCGCGCTGGATGTTTCAGTGCGCGCGCAGGTGCTGAATCTGATGATGGATTTGCAGCAGGAGTTGGGGCTGTCTTATGTCTTTATCTCCCACGACCTGTCGGTGGTGGAGCACATTGCTGATGAAGTGATGGTGATGTACCTGGGCCGCTGCGTGGAGAAGGGAACGAAAGACCAAATCTTCAATAACCCGCGCCATCCGTACACTCAGGCGCTACTTTCCGCGACGCCGCGCCTGAACCCGGACGATCGCCGCGAGCGCATCAAGCTCAGCGGTGAACTACCAAGCCCACTGAATCCACCGCCGGGTTGCGCCTTCAACGCCCGCTGTCGTCGGCGCTTCGGCCCCTGCACCCAGTTGCAGCCGCAGCTAAAAGACTACGGCGGTCAACTGGTAGCTTGTTTTGCTGTTGATCAGGATGAAAATCCGCAGCGTTAA", - "dna_sequence_length": 1005, - "functions": [ - "dipeptide/heme ABC transporter ATPas" - ], - "id": "CDS_3478", - "location": [ - [ - "NC_000913", - 3702868, - "-", - 1005 - ] - ], - "md5": "b9d5adab80063e63d93da4e68853dc64", - "parent_gene": "", - "protein_md5": "0c125115795bae7a1e6e7b32d8334b76", - "protein_translation": "MSTQEATLQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLTMIEMPTGGELYYQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRERIKLSGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYGGQLVACFAVDQDENPQR", - "protein_translation_length": 334, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3528" - ], - [ - "gene_synonym", - "NP_417998.1" - ], - [ - "gene_synonym", - "EcoGene:EG12627" - ], - [ - "gene_synonym", - "b3541" - ], - [ - "gene_synonym", - "dppD" - ], - [ - "gene_synonym", - "JW3510" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAG0" - ], - [ - "gene_synonym", - "ASAP:ABE-0011566" - ], - [ - "gene_synonym", - "GI:16131413" - ], - [ - "gene_synonym", - "GeneID:948065" - ] - ], - "dna_sequence": "ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAGCTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTATGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAAAAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACACCGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACCTGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAGCGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGACCATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACCTGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCCATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCTGGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCACTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGATGATGCCGGGAGGCCGACACTATGA", - "dna_sequence_length": 984, - "functions": [ - "dipeptide/heme ABC transporter ATPas" - ], - "id": "CDS_3479", - "location": [ - [ - "NC_000913", - 3703848, - "-", - 984 - ] - ], - "md5": "0e4d2201de5a676abeab048122f7e572", - "parent_gene": "", - "protein_md5": "d03839ac745ddbaf94d5a9a460a0aa79", - "protein_translation": "MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHAIFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLDDAGRPTL", - "protein_translation_length": 327, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3529" - ], - [ - "gene_synonym", - "EcoGene:EG12626" - ], - [ - "gene_synonym", - "b3542" - ], - [ - "gene_synonym", - "dppC" - ], - [ - "gene_synonym", - "ASAP:ABE-0011570" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEG1" - ], - [ - "gene_synonym", - "JW3511" - ], - [ - "gene_synonym", - "NP_417999.1" - ], - [ - "gene_synonym", - "GI:16131414" - ], - [ - "gene_synonym", - "GeneID:948064" - ] - ], - "dna_sequence": "ATGTCACAGGTTACTGAAAATAAAGTGATTAGCGCACCGGTGCCGATGACCCCGTTACAGGAGTTCTGGCACTATTTTAAACGCAACAAAGGCGCGGTCGTCGGGCTGGTTTACGTCGTCATCGTGCTGTTCATCGCGATCTTTGCCAACTGGATTGCACCCTATAACCCGGCGGAACAGTTCCGCGATGCACTGCTCGCCCCGCCAGCCTGGCAGGAAGGCGGCAGCATGGCGCACTTGCTGGGCACCGATGACGTAGGCCGTGATGTGCTGTCGCGCCTGATGTACGGTGCGCGCCTGTCGCTGCTGGTTGGCTGTCTGGTAGTTGTGTTATCGCTGATTATGGGCGTTATTCTCGGCCTGATCGCCGGTTACTTTGGCGGCCTGGTCGATAACATCATTATGCGCGTGGTCGATATCATGCTGGCGCTGCCAAGTCTGCTGCTGGCGCTGGTGCTGGTGGCAATTTTCGGCCCGTCGATTGGTAACGCCGCGCTGGCACTGACCTTCGTTGCCTTGCCGCACTATGTGCGCTTAACCCGCGCCGCCGTGCTGGTGGAAGTTAACCGCGATTACGTCACCGCGTCTCGCGTGGCGGGTGCCGGGGCGATGCGTCAGATGTTTATTAACATCTTCCCGAACTGCCTTGCGCCGCTGATTGTTCAGGCGTCGCTCGGTTTCTCTAACGCCATTCTCGATATGGCTGCTCTTGGTTTCCTCGGCATGGGGGCACAGCCGCCAACGCCTGAGTGGGGCACCATGCTCTCCGACGTGTTGCAGTTCGCGCAAAGCGCCTGGTGGGTCGTGACCTTCCCGGGTCTGGCGATCCTGCTGACGGTGCTGGCATTTAACCTGATGGGTGACGGTCTGCGTGACGCGCTCGATCCCAAACTGAAGCAGTAA", - "dna_sequence_length": 903, - "functions": [ - "dipeptide/heme ABC transporter permease" - ], - "id": "CDS_3480", - "location": [ - [ - "NC_000913", - 3704761, - "-", - 903 - ] - ], - "md5": "aa72038a7b3a1180d3360771b73d223b", - "parent_gene": "", - "protein_md5": "462381d1f9177a9af316dab6fb71b1f4", - "protein_translation": "MSQVTENKVISAPVPMTPLQEFWHYFKRNKGAVVGLVYVVIVLFIAIFANWIAPYNPAEQFRDALLAPPAWQEGGSMAHLLGTDDVGRDVLSRLMYGARLSLLVGCLVVVLSLIMGVILGLIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPSIGNAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPKLKQ", - "protein_translation_length": 300, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418000.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEF8" - ], - [ - "gene_synonym", - "b3543" - ], - [ - "gene_synonym", - "dppB" - ], - [ - "gene_synonym", - "EcoGene:EG12625" - ], - [ - "gene_synonym", - "ASAP:ABE-0011572" - ], - [ - "gene_synonym", - "ECK3530" - ], - [ - "gene_synonym", - "JW3512" - ], - [ - "gene_synonym", - "GeneID:948063" - ], - [ - "gene_synonym", - "GI:16131415" - ] - ], - "dna_sequence": "ATGTTGCAGTTTATTCTCCGACGTTTGGGACTCGTCATCCCCACGTTTATCGGTATTACCCTTCTCACATTTGCCTTTGTCCACATGATCCCGGGCGATCCGGTGATGATCATGGCGGGCGAACGTGGGATCTCCCCAGAGCGTCACGCGCAGCTGCTGGCTGAACTCGGCTTAGATAAACCGATGTGGCAGCAGTATCTCCATTACATTTGGGGCGTTATGCATGGCGATCTAGGCATTTCAATGAAAAGCCGCATCCCGGTTTGGGAAGAGTTCGTGCCGCGCTTCCAGGCCACGCTGGAACTTGGCGTCTGCGCGATGATTTTTGCTACGGCAGTCGGTATTCCGGTCGGCGTGCTGGCTGCGGTTAAACGCGGTTCCATTTTCGATCACACAGCGGTTGGCCTGGCGCTGACAGGTTATTCAATGCCTATCTTCTGGTGGGGCATGATGCTGATCATGCTGGTTTCGGTGCACTGGAACCTGACGCCCGTCTCCGGTCGCGTGAGCGATATGGTGTTCCTCGATGACTCCAATCCGTTAACCGGTTTTATGCTAATCGACACCGCCATCTGGGGTGAAGACGGCAACTTTATCGATGCCGTCGCCCATATGATCTTGCCTGCCATTGTGCTGGGTACTATTCCGCTGGCGGTCATTGTGCGTATGACACGCTCCTCGATGCTGGAAGTGCTGGGCGAGGATTACATCCGCACCGCGCGCGCCAAAGGGCTAACCCGCATGCGGGTGATTATCGTCCATGCGCTGCGTAACGCGATGCTGCCGGTGGTGACCGTTATCGGCCTGCAGGTGGGAACATTGCTGGCGGGGGCGATTCTGACCGAAACCATCTTCTCGTGGCCCGGTCTGGGACGCTGGTTGATTGACGCACTGCAACGCCGCGACTATCCGGTAGTGCAGGGCGGCGTATTGCTGGTGGCGACGATGATTATCCTCGTCAACTTGCTGGTCGATCTGCTGTACGGCGTGGTGAACCCGCGTATTCGTCATAAGAAGTAA", - "dna_sequence_length": 1020, - "functions": [ - "dipeptide/heme ABC transporter permease" - ], - "id": "CDS_3481", - "location": [ - [ - "NC_000913", - 3705790, - "-", - 1020 - ] - ], - "md5": "4670cdb04bb4502a929943ad4ab03bec", - "parent_gene": "", - "protein_md5": "5564ce4abd1598e41a94c30ac6f888ed", - "protein_translation": "MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRHKK", - "protein_translation_length": 339, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418001.1" - ], - [ - "gene_synonym", - "dpp" - ], - [ - "gene_synonym", - "ASAP:ABE-0011576" - ], - [ - "gene_synonym", - "dppA" - ], - [ - "gene_synonym", - "ECK3531" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23847" - ], - [ - "gene_synonym", - "b3544" - ], - [ - "gene_synonym", - "fpp" - ], - [ - "gene_synonym", - "JW3513" - ], - [ - "gene_synonym", - "GeneID:948062" - ], - [ - "gene_synonym", - "alu" - ], - [ - "gene_synonym", - "GI:16131416" - ], - [ - "gene_synonym", - "EcoGene:EG10248" - ] - ], - "dna_sequence": "ATGCGTATTTCCTTGAAAAAGTCAGGGATGCTGAAGCTTGGTCTCAGCCTGGTGGCTATGACCGTCGCAGCAAGTGTTCAGGCTAAAACTCTGGTTTATTGCTCAGAAGGATCTCCGGAAGGGTTTAACCCGCAGCTGTTTACCTCCGGCACCACCTATGACGCCTCTTCCGTCCCGCTTTATAACCGTCTGGTTGAATTTAAAATCGGCACCACCGAAGTGATCCCGGGCCTCGCTGAAAAGTGGGAAGTCAGCGAAGACGGTAAAACCTATACCTTCCATCTGCGTAAAGGTGTGAAGTGGCACGACAATAAAGAATTCAAACCGACGCGTGAACTGAACGCCGATGATGTGGTGTTCTCGTTCGATCGTCAGAAAAACGCGCAAAACCCGTACCATAAAGTTTCTGGCGGCAGCTACGAATACTTCGAAGGCATGGGCTTGCCAGAGCTGATCAGTGAAGTGAAAAAGGTGGACGACAACACCGTTCAGTTTGTGCTGACTCGCCCGGAAGCGCCGTTCCTCGCTGACCTGGCAATGGACTTCGCCTCTATTCTGTCAAAAGAATATGCTGATGCGATGATGAAAGCCGGTACACCGGAAAAACTGGACCTCAACCCAATCGGAACCGGTCCGTTCCAGTTACAGCAGTATCAAAAAGATTCCCGTATCCGCTACAAAGCGTTTGATGGCTACTGGGGCACCAAACCGCAGATCGATACGCTGGTTTTCTCTATTACCCCTGACGCTTCCGTGCGTTACGCGAAATTGCAGAAGAATGAATGCCAGGTGATGCCGTACCCGAACCCGGCAGATATCGCTCGCATGAAGCAGGATAAATCCATCAATCTGATGGAAATGCCGGGGCTGAACGTCGGTTATCTCTCGTATAACGTGCAGAAAAAACCACTCGATGACGTGAAAGTTCGCCAGGCTCTGACCTACGCGGTGAACAAAGACGCGATCATCAAAGCGGTTTATCAGGGCGCGGGCGTATCAGCGAAAAACCTGATCCCGCCAACCATGTGGGGCTATAACGACGACGTTCAGGACTACACCTACGATCCTGAAAAAGCGAAAGCCTTGCTGAAAGAAGCGGGTCTGGAAAAAGGTTTCTCCATCGACCTGTGGGCGATGCCGGTACAACGTCCGTATAACCCGAACGCTCGCCGCATGGCGGAGATGATTCAGGCAGACTGGGCGAAAGTCGGCGTGCAGGCCAAAATTGTCACCTACGAATGGGGTGAGTACCTCAAGCGTGCGAAAGATGGCGAGCACCAGACGGTAATGATGGGCTGGACTGGCGATAACGGGGATCCGGATAACTTCTTCGCCACCCTGTTCAGCTGCGCCGCCTCTGAACAAGGCTCCAACTACTCAAAATGGTGCTACAAACCGTTTGAAGATCTGATTCAACCGGCGCGTGCTACCGACGACCACAATAAACGCGTTGAACTGTACAAACAAGCGCAGGTGGTGATGCACGATCAGGCTCCGGCACTGATCATCGCTCACTCCACCGTGTTTGAACCGGTACGTAAAGAAGTTAAAGGCTATGTGGTTGATCCATTAGGCAAACATCACTTCGAAAACGTCTCTATCGAATAA", - "dna_sequence_length": 1608, - "functions": [ - "dipeptide/heme ABC transporter periplasmic binding protein", - "dipeptide chemotaxis receptor" - ], - "id": "CDS_3482", - "location": [ - [ - "NC_000913", - 3707705, - "-", - 1608 - ] - ], - "md5": "5b3f78837b5ea9759e10a1b6cf4b6d85", - "parent_gene": "", - "protein_md5": "d1cdacd5d00da33b7dba0df200229b25", - "protein_translation": "MRISLKKSGMLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPLYNRLVEFKIGTTEVIPGLAEKWEVSEDGKTYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFDRQKNAQNPYHKVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYADAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQIDTLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDVKVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAKALLKEAGLEKGFSIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRAKDGEHQTVMMGWTGDNGDPDNFFATLFSCAASEQGSNYSKWCYKPFEDLIQPARATDDHNKRVELYKQAQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENVSIE", - "protein_translation_length": 535, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3546" - ], - [ - "gene_synonym", - "ECK3533" - ], - [ - "gene_synonym", - "JW5660" - ], - [ - "gene_synonym", - "EcoGene:EG12267" - ], - [ - "gene_synonym", - "GeneID:948068" - ], - [ - "gene_synonym", - "NP_418002.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37661" - ], - [ - "gene_synonym", - "yhjW" - ], - [ - "gene_synonym", - "pagC" - ], - [ - "gene_synonym", - "eptB" - ], - [ - "gene_synonym", - "ASAP:ABE-0011581" - ], - [ - "gene_synonym", - "GI:90111611" - ] - ], - "dna_sequence": "ATGAGATACATCAAATCGATTACACAGCAGAAGCTGAGCTTTTTGCTTGCAATCTATATTGGCCTTTTTATGAATGGCGCGGTTTTTTACCGCCGCTTCGGCAGCTATGCGCACGATTTTACCGTCTGGAAAGGCATTTCTGCTGTTGTTGAACTGGCCGCCACCGTACTGGTGACCTTCTTTTTACTACGTCTTCTTTCGCTGTTTGGCCGCCGCAGCTGGCGTATTCTGGCATCGCTGGTGGTGCTCTTTTCCGCAGGTGCCAGCTATTACATGACCTTCCTTAATGTGGTCATTGGTTATGGCATCATCGCTTCCGTCATGACCACCGATATCGACCTGTCAAAAGAAGTTGTTGGTCTGAACTTTATTCTCTGGTTAATCGCCGTTAGTGCATTGCCTCTTATCCTTATCTGGAATAACCGCTGTCGCTACACCTTGCTCCGACAACTGCGAACCCCAGGGCAGCGTATTCGCAGCCTGGCGGTCGTCGTACTGGCGGGTATTATGGTTTGGGCACCGATTCGTTTGCTGGATATCCAGCAGAAGAAAGTGGAGAGGGCGACCGGCGTTGATTTGCCGAGTTATGGCGGTGTCGTAGCGAACTCTTATCTGCCATCAAACTGGCTTTCTGCGTTGGGGCTGTATGCCTGGGCGCGGGTCGATGAATCTTCCGATAATAATTCATTGCTTAATCCGGCGAAGAAATTCACTTATCAGGCACCGCAAAACGTTGATGACACTTATGTCGTGTTTATCATCGGTGAAACCACGCGTTGGGACCATATGGGTATTTTCGGCTATGAGCGTAATACCACGCCGAAACTGGCCCAGGAGAAAAATCTGGCGGCGTTCCGTGGTTACTCCTGTGATACCGCAACCAAACTCTCACTGCGTTGCATGTTTGTACGTCAGGGGGGCGCGGAAGATAATCCGCAGCGCACATTAAAAGAACAGAACATTTTCGCGGTTCTGAAGCAGTTAGGATTCAGTTCTGACCTCTACGCTATGCAGAGCGAAATGTGGTTCTACAGCAACACGATGGCGGACAACATTGCTTATCGTGAGCAGATTGGTGCGGAGCCACGTAATCGTGGCAAGCCGGTAGATGATATGTTGCTGGTAGACGAAATGCAGCAATCGCTAGGGCGCAACCCGGATGGTAAGCATCTGATCATTCTGCATACCAAAGGTTCGCATTTTAACTACACCCAGCGTTATCCGCGTAGCTTCGCGCAGTGGAAGCCGGAATGTATTGGTGTTGATAGCGGCTGTACCAAAGCGCAGATGATCAACTCCTATGACAACTCGGTGACCTATGTGGATCACTTTATCTCCAGCGTGATTGATCAGGTTCGCGATAAGAAAGCGATTGTGTTCTACGCAGCTGACCACGGTGAGTCAATTAATGAACGCGAGCACCTGCACGGCACGCCGCGTGAACTGGCACCGCCGGAGCAGTTCCGCGTACCGATGATGGTCTGGATGTCAGATAAATATCTGGAAAATCCGGCCAATGCGCAGGCGTTTGCGCAGCTGAAAAAAGAAGCCGACATGAAAGTGCCACGCCGTCACGTAGAGCTGTACGATACCATCATGGGTTGTCTTGGCTATACTTCACCGGATGGTGGAATTAACGAAAACAACAACTGGTGTCACATCCCGCAGGCAAAAGAGGCAGCGGCTAACTAA", - "dna_sequence_length": 1692, - "functions": [ - "KDO phosphoethanolamine transferase, Ca(2+)-inducible" - ], - "id": "CDS_3483", - "location": [ - [ - "NC_000913", - 3710475, - "-", - 1692 - ] - ], - "md5": "c408715f35d31db017a012cf5c11baef", - "parent_gene": "", - "protein_md5": "df841a9ecb8bd49056c65c4ec0caa48d", - "protein_translation": "MRYIKSITQQKLSFLLAIYIGLFMNGAVFYRRFGSYAHDFTVWKGISAVVELAATVLVTFFLLRLLSLFGRRSWRILASLVVLFSAGASYYMTFLNVVIGYGIIASVMTTDIDLSKEVVGLNFILWLIAVSALPLILIWNNRCRYTLLRQLRTPGQRIRSLAVVVLAGIMVWAPIRLLDIQQKKVERATGVDLPSYGGVVANSYLPSNWLSALGLYAWARVDESSDNNSLLNPAKKFTYQAPQNVDDTYVVFIIGETTRWDHMGIFGYERNTTPKLAQEKNLAAFRGYSCDTATKLSLRCMFVRQGGAEDNPQRTLKEQNIFAVLKQLGFSSDLYAMQSEMWFYSNTMADNIAYREQIGAEPRNRGKPVDDMLLVDEMQQSLGRNPDGKHLIILHTKGSHFNYTQRYPRSFAQWKPECIGVDSGCTKAQMINSYDNSVTYVDHFISSVIDQVRDKKAIVFYAADHGESINEREHLHGTPRELAPPEQFRVPMMVWMSDKYLENPANAQAFAQLKKEADMKVPRRHVELYDTIMGCLGYTSPDGGINENNNWCHIPQAKEAAAN", - "protein_translation_length": 563, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3534" - ], - [ - "gene_synonym", - "b3547" - ], - [ - "gene_synonym", - "GI:16131418" - ], - [ - "gene_synonym", - "JW3516" - ], - [ - "gene_synonym", - "NP_418003.1" - ], - [ - "gene_synonym", - "yhjX" - ], - [ - "gene_synonym", - "oxlT" - ], - [ - "gene_synonym", - "ASAP:ABE-0011586" - ], - [ - "gene_synonym", - "GeneID:948066" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37662" - ], - [ - "gene_synonym", - "EcoGene:EG12268" - ] - ], - "dna_sequence": "ATGACACCTTCAAATTATCAGCGTACCCGCTGGCTGACACTCATCGGTACTATCATTACCCAGTTTGCGCTGGGGTCGGTTTATACCTGGAGCCTGTTTAATGGCGCGCTTTCCGCCAAGCTGGATGCGCCGGTAAGCCAGGTCGCTTTCTCTTTCGGCTTGTTAAGTCTGGGGCTGGCAATTTCGTCTTCTGTTGCGGGCAAATTACAGGAACGTTTTGGCGTTAAACGCGTCACCATGGCTTCCGGCATTTTGCTGGGATTAGGCTTCTTCCTGACAGCGCATTCTGACAACCTGATGATGCTGTGGTTAAGCGCCGGTGTGCTGGTGGGACTGGCAGATGGCGCGGGTTATCTGCTGACGCTCTCTAACTGTGTGAAGTGGTTCCCGGAGCGTAAAGGTCTGATCTCCGCGTTCGCTATCGGTTCTTATGGTCTGGGTAGCCTGGGTTTCAAATTTATCGACACGCAGCTGCTGGAAACGGTCGGTCTGGAAAAAACCTTTGTGATTTGGGGAGCGATTGCGCTGTTGATGATTGTTTTCGGCGCAACGTTAATGAAAGACGCACCAAAACAGGAAGTGAAAACCAGCAATGGTGTGGTGGAGAAAGATTACACGCTGGCAGAGTCGATGCGTAAACCGCAGTACTGGATGTTAGCGGTAATGTTCCTGACCGCCTGCATGAGCGGCCTGTACGTGATTGGGGTAGCGAAAGATATCGCCCAAAGTCTGGCACACCTTGATGTGGTTTCCGCAGCCAATGCAGTCACTGTTATTTCCATCGCCAACCTTTCAGGTCGTCTGGTGCTGGGTATTCTGTCTGACAAAATCGCCCGTATCCGTGTTATTACCATTGGTCAGGTGATATCGCTGGTGGGTATGGCGGCCCTGCTGTTTGCACCATTGAATGCAGTGACGTTCTTTGCAGCGATTGCCTGCGTGGCATTTAACTTTGGCGGCACTATTACCGTCTTTCCGTCACTGGTCAGTGAGTTCTTTGGCCTCAATAACCTGGCGAAAAACTACGGTGTGATTTATCTCGGTTTCGGTATCGGTAGCATTTGTGGTTCGATTATCGCCTCACTGTTTGGCGGCTTCTATGTGACCTTCTACGTGATTTTCGCCCTGCTGATTCTGTCATTGGCGCTTTCTACGACGATTCGTCAGCCAGAGCAGAAAATGTTGCGTGAGGCGCATGGCTCCCTTTAA", - "dna_sequence_length": 1209, - "functions": [ - "pyruvate-inducible inner membrane protein, putative transporter" - ], - "id": "CDS_3484", - "location": [ - [ - "NC_000913", - 3712007, - "-", - 1209 - ] - ], - "md5": "d8eff52f69ab19ff0b51f12c9dca0624", - "parent_gene": "", - "protein_md5": "29c6399dfa9cae69ed84165c8b924865", - "protein_translation": "MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAPVSQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSDNLMMLWLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLETVGLEKTFVIWGAIALLMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDKIARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSICGSIIASLFGGFYVTFYVIFALLILSLALSTTIRQPEQKMLREAHGSL", - "protein_translation_length": 402, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3548" - ], - [ - "gene_synonym", - "ECK3535" - ], - [ - "gene_synonym", - "GI:90111612" - ], - [ - "gene_synonym", - "yhjY" - ], - [ - "gene_synonym", - "ASAP:ABE-0011589" - ], - [ - "gene_synonym", - "GeneID:948073" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37663" - ], - [ - "gene_synonym", - "JW5659" - ], - [ - "gene_synonym", - "NP_418004.4" - ], - [ - "gene_synonym", - "EcoGene:EG12269" - ] - ], - "dna_sequence": "ATGATCATAAAAAAAAGCGGTGGTCGCTGGCAGCTAAGCCTGCTGGCGAGCGTGGTAATCAGTGCCTTTTTTCTCAACACAGCTTACGCCTGGCAACAAGAATATATCGTTGATACGCAACCCGGACTTTCCACAGAGCGTTACACCTGGGATAGTGATCATCAACCTGATTACAACGATATTTTGTCGCAACGTATTCAAAGTAGCCAAAGGGCGCTGGGACTGGAAGTCAATCTGGCGGAAGAAACCCCTGTGGATGTGACCAGCAGTATGAGTATGGGCTGGAATTTTCCTTTATATGAACAGGTTACAACCGGCCCGGTCGCGGCATTACATTACGATGGCACAACCACCTCGATGTATAACGAGTTTGGCGACAGTACTACCACGCTGACCGATCCGTTATGGCATGCCAGCGTGAGTACCTTAGGCTGGCGTGTTGACTCCCGGCTTGGCGATCTCCGACCCTGGGCGCAAATCAGCTATAACCAGCAATTTGGCGAGAATATCTGGAAGGCGCAATCAGGCCTGAGCCGGATGACGGCGACAAACCAGAACGGCAACTGGCTGGATGTCACCGTAGGCGCTGATATGTTGCTCAATCAAAATATTGCCGCCTATGCCGCGCTAACTCAGGCAGAAAATACCACTAATAATAGCGACTATCTGTATACGATGGGGGTTAGCGCCAGATTTTAA", - 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"JW3518" - ], - [ - "gene_synonym", - "GI:16131420" - ], - [ - "gene_synonym", - "ASAP:ABE-0011593" - ] - ], - "dna_sequence": "ATGGAACGTTGCGGCTGGGTGAGTCAGGACCCGCTTTATATTGCCTACCATGATAATGAGTGGGGCGTGCCTGAAACTGACAGTAAAAAACTGTTCGAAATGATCTGCCTTGAAGGGCAGCAGGCTGGATTATCGTGGATCACCGTCCTCAAAAAACGCGAAAACTATCGCGCCTGCTTTCATCAGTTCGATCCGGTGAAGGTCGCAGCAATGCAGGAAGAGGATGTCGAAAGACTGGTACAGGACGCCGGGATTATCCGCCATCGAGGGAAAATTCAGGCAATTATTGGTAATGCGCGGGCGTACCTGCAAATGGAACAGAACGGCGAACCGTTTGTCGACTTTGTCTGGTCGTTTGTAAATCATCAGCCACAGGTGACACAAGCCACAACGTTGAGCGAAATTCCCACATCTACGTCCGCCTCCGACGCCCTATCTAAGGCACTGAAAAAACGTGGTTTTAAGTTTGTCGGCACCACAATCTGTTACTCCTTTATGCAGGCATGTGGGCTGGTGAATGATCATGTGGTTGGCTGCTGTTGCTATCCGGGAAATAAACCATGA", - "dna_sequence_length": 564, - "functions": [ - "3-methyl-adenine DNA glycosylase I, constitutive" - ], - "id": "CDS_3486", - "location": [ - [ - "NC_000913", - 3713092, - "+", - 564 - ] - ], - "md5": "bbdbd9176a5b4d0c5090f6536fc60387", - "parent_gene": "", - "protein_md5": "066f7bd100a8dcf0ad4f7e37517c0e12", - "protein_translation": "MERCGWVSQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFVDFVWSFVNHQPQVTQATTLSEIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGCCCYPGNKP", - "protein_translation_length": 187, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946460" - ], - [ - "gene_synonym", - "NP_418006.1" - ], - [ - "gene_synonym", - "JW3519" - ], - [ - "gene_synonym", - "yiaC" - ], - [ - "gene_synonym", - "b3550" - ], - [ - "gene_synonym", - "EcoGene:EG12270" - ], - [ - "gene_synonym", - "ASAP:ABE-0011595" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37664" - ], - [ - "gene_synonym", - "GI:16131421" - ], - [ - "gene_synonym", - "ECK3537" - ] - ], - "dna_sequence": "ATGATTCGGGAAGCGCAACGTTCAGAACTCCCCGCGATCCTCGAACTGTGGCTGGAAAGTACAACCTGGGGGCATCCCTTTATAAAAGCGAATTACTGGCGTGACTGCATTCCGCTGGTGCGGGATGCCTATCTTGCCAACGCGCAAAACTGGGTCTGGGAAGAAGACGGTAAGCTTCTCGGTTTTGTCAGCATTATGGAAGGCCGATTTCTGGCAGCGATGTTTGTCGCACCGAAGGCCGTCAGGCGCGGTATTGGTAAGGCGCTGATGCAGTATGTGCAGCAGCGCCATCCCCACCTGATGCTGGAGGTTTATCAAAAAAATCAACCGGCGATAAATTTTTACCAGGCACAGGGTTTTCACATTGTCGATTGCGCATGGCAGGATGAAACCCAACTACCCACATGGATTATGAGCTGGCCGGTGGTTCAAACGCTGTAA", - "dna_sequence_length": 441, - "functions": [ - "GNAT family putative N-acetyltransferase" - ], - "id": "CDS_3487", - "location": [ - [ - "NC_000913", - 3713652, - "+", - 441 - ] - ], - "md5": "3ad512f77e67dc5b1a86e2054e062179", - "parent_gene": "", - "protein_md5": "2c2f7ff8626da4cb8f627a99be8d0d61", - "protein_translation": "MIREAQRSELPAILELWLESTTWGHPFIKANYWRDCIPLVRDAYLANAQNWVWEEDGKLLGFVSIMEGRFLAAMFVAPKAVRRGIGKALMQYVQQRHPHLMLEVYQKNQPAINFYQAQGFHIVDCAWQDETQLPTWIMSWPVVQTL", - "protein_translation_length": 146, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10124" - ], - [ - "gene_synonym", - "ECK3538" - ], - [ - "gene_synonym", - "b3551" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P20099" - ], - [ - "gene_synonym", - "JW5940" - ], - [ - "gene_synonym", - "NP_418007.3" - ], - [ - "gene_synonym", - "GeneID:946915" - ], - [ - "gene_synonym", - "ASAP:ABE-0011597" - ], - [ - "gene_synonym", - "bisC" - ], - [ - "gene_synonym", - "GI:145698325" - ] - ], - "dna_sequence": "TTGGCCAACTCATCCTCACGATATTCCGTTCTGACTGCCGCCCATTGGGGGCCCATGCTGGTTGAAACCGACGGCGAAACCGTGTTTAGCTCGCGTGGCGCGTTAGCCACAGGAATGGAAAACTCCTTGCAGAGCGCGGTTCGCGACCAGGTTCACAGCAATACGCGGGTACGATTTCCAATGGTGCGAAAAGGCTTTCTTGCGTCACCGGAAAACCCGCAAGGCATTCGTGGGCAGGATGAATTTGTTCGCGTGAGTTGGGATGAGGCGCTGGATCTTATTCACCAACAACATAAACGCATTCGTGAGGCTTATGGTCCGGCATCGATTTTTGCTGGTTCCTACGGCTGGCGTTCAAACGGCGTGCTGCATAAGGCCTCGACATTATTACAACGCTATATGGCGCTGGCAGGCGGTTATACCGGGCATCTGGGGGATTATTCGACCGGCGCGGCACAGGCGATCATGCCGTATGTCGTGGGTGGTAGTGAAGTTTATCAACAGCAGACCAGTTGGCCGCTGGTGCTGGAACATAGCGATGTCGTGGTGCTGTGGAGTGCTAACCCACTCAATACGCTGAAAATTGCGTGGAATGCATCCGATGAGCAGGGGCTTTCTTACTTTTCTGCACTGCGTGACAGCGGGAAAAAGCTGATCTGCATTGATCCAATGCGATCGGAAACCGTCGATTTCTTTGGCGATAAAATGGAGTGGGTGGCACCGCACATGGGCACCGATGTTGCGCTGATGCTGGGGATCGCCCATACGCTGGTGGAAAATGGTTGGCACGACGAAGCGTTTCTGGCGCGTTGCACCACAGGTTATGCCGTCTTCGCCTCTTATTTGCTGGGCGAGAGTGACGGAATAGCGAAAACCGCCGAATGGGCAGCAGAGATTTGTGGTGTTGGCGCAGCGAAAATCCGCGAGCTGGCGGCTATTTTCCACCAAAATACCACCATGCTGATGGCAGGCTGGGGAATGCAGCGCCAACAGTTTGGTGAGCAAAAACACTGGATGATCGTCACGCTGGCAGCAATGTTGGGGCAAATCGGCACACCCGGCGGCGGTTTTGGTCTTTCTTACCATTTTGCCAATGGTGGTAACCCCACGCGGCGTTCTGCGGTGCTCTCTTCCATGCAGGGCAGCTTGCCGGGTGGCTGCGATGCGGTGGATAAAATCCCTGTTGCCCGCATTGTTGAAGCACTGGAAAACCCTGGTGGCGCATATCAACACAACGGTATGAACCGACATTTCCCGGATATTCGTTTTATCTGGTGGGCGGGCGGTGCCAACTTTACTCATCATCAGGATACCAATCGCCTGATCCGTGCCTGGCAAAAACCGGAGCTGGTGGTGATCTCTGAATGCTTCTGGACGGCGGCGGCAAAACACGCGGATATCGTTCTGCCTGCGACTACCTCTTTTGAGCGTAATGATCTCACCATGACCGGTGATTACAGTAATCAGCATCTGGTGCCGATGAAGCAAGTGGTGCCGCCACGCTATGAAGCGCGTAATGATTTTGATGTTTTTGCCGAGTTAAGTGAACGCTGGGAGAAGGGCGGTTATGCACGTTTTACGGAAGGAAAAAGTGAGCTGCAATGGCTGGAAACGTTTTATAACGTTGCCCGACAGCGCGGGGCAAGCCAGCAGGTTGAATTGCCGCCATTTGCTGAGTTCTGGCAAGCCAACCAGTTAATTGAGATGCCGGAAAACCCGGACAGCGAGCGGTTTATTCGCTTCGCTGATTTTTGCCGCGATCCGCTGGCGCATCCGTTAAAAACCGCCAGCGGCAAGATTGAAATCTTCTCACAGCGTATTGCCGATTACGGTTACCCGGATTGCCCTGGGCATCCAATGTGGCTGGAGCCGGACGAATGGCAGGGCAATGCCGAACCAGAACAGTTGCAGGTACTTTCTGCCCATCCGGCGCACCGCCTGCACAGCCAGCTGAATTACAGTTCTCTGCGCGAATTGTACGCGGTGGCAAATCGTGAGCCTGTCACCATTCATCCTGACGATGCCCAGGAGCGCGGCATACAAGATGGCGATACTGTTCGGTTGTGGAACGCACGCGGGCAAATTCTTGCCGGAGCGGTCATTAGCGAGGGAATTAAACCTGGCGTGATTTGCATTCACGAAGGGGCATGGCCGGATCTGGATTTAACCGCTGACGGTATTTGTAAAAACGGCGCAGTGAACGTGCTGACCAAAGATCTCCCCAGCTCGCGGCTGGGGAATGGCTGTGCGGGTAATACGGCGCTGGCATGGCTGGAAAAATACAACGGTCCGGAACTGACACTTACAGCGTTTGAACCACCGGCCAGCTCATAA", 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"MANSSSRYSVLTAAHWGPMLVETDGETVFSSRGALATGMENSLQSAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVRVSWDEALDLIHQQHKRIREAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVVGGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKLICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLVENGWHDEAFLARCTTGYAVFASYLLGESDGIAKTAEWAAEICGVGAAKIRELAAIFHQNTTMLMAGWGMQRQQFGEQKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRRSAVLSSMQGSLPGGCDAVDKIPVARIVEALENPGGAYQHNGMNRHFPDIRFIWWAGGANFTHHQDTNRLIRAWQKPELVVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVVPPRYEARNDFDVFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWQANQLIEMPENPDSERFIRFADFCRDPLAHPLKTASGKIEIFSQRIADYGYPDCPGHPMWLEPDEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDAQERGIQDGDTVRLWNARGQILAGAVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTKDLPSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS", - "protein_translation_length": 777, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3539" - ], - [ - "gene_synonym", - "YP_026228.1" - ], - [ - "gene_synonym", - "EcoGene:EG12271" - ], - [ - "gene_synonym", - "JW5657" - ], - [ - "gene_synonym", - "yiaD" - ], - [ - "gene_synonym", - "b3552" - ], - [ - "gene_synonym", - "GI:49176370" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37665" - ], - [ - "gene_synonym", - "GeneID:948075" - ], - [ - "gene_synonym", - "ASAP:ABE-0011601" - ] - ], - "dna_sequence": "ATGAAGAAACGTGTTTATCTTATTGCCGCCGTAGTGAGTGGCGCTCTGGCGGTATCTGGCTGCACAACTAACCCTTACACCGGCGAACGCGAAGCAGGTAAATCTGCTATCGGCGCAGGTCTGGGCTCTCTCGTGGGCGCGGGTATTGGTGCGCTCTCTTCTTCGAAGAAAGATCGCGGTAAAGGCGCGCTGATTGGCGCAGCAGCAGGCGCAGCTCTGGGCGGCGGCGTTGGTTATTACATGGATGTGCAGGAAGCGAAGCTGCGCGACAAAATGCGCGGCACTGGTGTTAGCGTAACCCGCAGCGGGGATAACATTATCCTCAATATGCCGAACAATGTGACCTTCGACAGCAGCAGCGCGACCCTGAAACCGGCGGGCGCTAACACCCTGACCGGCGTGGCAATGGTACTGAAAGAGTATCCGAAAACGGCGGTTAACGTGATTGGTTATACCGACAGCACGGGTGGTCACGACCTGAACATGCGTCTCTCCCAGCAACGTGCGGATTCCGTTGCCAGCGCGTTGATCACCCAGGGCGTGGACGCCAGCCGCATCCGTACTCAGGGCCTTGGCCCGGCTAACCCAATCGCCAGCAACAGCACCGCAGAAGGTAAGGCGCAAAACCGCCGTGTAGAAATTACCTTAAGCCCGCTGTAA", - "dna_sequence_length": 660, - "functions": [ - "multicopy suppressor of bamB", - "outer membrane lipoprotein" - ], - "id": "CDS_3489", - "location": [ - [ - "NC_000913", - 3716547, - "+", - 660 - ] - ], - "md5": "e83f1f1c5661a16e6b598ede438799a4", - "parent_gene": "", - "protein_md5": "73fda5c9064dcaf9e2ab74e80353758c", - "protein_translation": "MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLGSLVGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tkrA" - ], - [ - "gene_synonym", - "ghrB" - ], - [ - "gene_synonym", - "GeneID:948074" - ], - [ - "gene_synonym", - "JW5656" - ], - [ - "gene_synonym", - "yiaE" - ], - [ - "gene_synonym", - "b3553" - ], - [ - "gene_synonym", - "ASAP:ABE-0011604" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37666" - ], - [ - "gene_synonym", - "NP_418009.2" - ], - [ - "gene_synonym", - "EcoGene:EG12272" - ], - [ - "gene_synonym", - "ECK3540" - ], - [ - "gene_synonym", - "GI:90111614" - ] - ], - "dna_sequence": "ATGAAGCCGTCCGTTATCCTCTACAAAGCCTTACCTGATGATTTACTGCAACGCCTGCAAGAGCATTTCACCGTTCACCAGGTGGCAAACCTCAGCCCACAAACCGTCGAACAAAATGCAGCAATTTTTGCCGAAGCTGAAGGTTTACTGGGTTCAAACGAGAATGTAAATGCCGCATTGCTGGAAAAAATGCCGAAACTGCGTGCCACATCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGATCGGCATGGCGCTGGCACAACGTGCGCACTTTGGCTTCAACATGCCCATCCTCTATAACGCGCGCCGCCACCATAAAGAAGCAGAAGAACGCTTCAACGCCCGCTACTGCGATTTGGATACTCTGTTACAAGAGTCAGATTTCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCGTTATGGCATGGCCGCCTGTGCCGTGGATAATTTGATTGATGCGTTACAAGGAAAGGTTGAGAAGAACTGTGTGAATCCGCACGTCGCGGACTAA", - 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[ - "gene_synonym", - "yiaF" - ], - [ - "gene_synonym", - "ASAP:ABE-0011606" - ], - [ - "gene_synonym", - "GI:90111615" - ], - [ - "gene_synonym", - "ECK3541" - ] - ], - "dna_sequence": "ATGGCGACAGGAAAGTCCTGCTCTCGCTGGTTTGCGCCTCTTGCGGCGTTATTAATGGTAGTTAGCCTGAGTGGGTGTTTTGATAAAGAAGGCGATCAGCGTAAAGCGTTTATCGACTTCCTGCAGAATACAGTGATGCGTAGCGGTGAACGTCTACCAACCCTGACTGCCGATCAGAAAAAACAGTTTGGTCCTTTTGTCTCTGATTACGCGATTCTGTATGGTTATTCTCAGCAGGTGAATCAGGCGATGGATTCCGGTCTGCGCCCGGTTGTAGACAGCGTTAACGCAATTCGCGTACCGCAGGATTACGTTACGCAAAGCGGTCCGCTGCGTGAAATGAACGGTTCGCTGGGTGTGCTGGCGCAACAACTGCAAAATGCGAAGTTGCAGGCCGATGCTGCGCACTCTGCGCTAAAACAGAGCGATGATTTGAAACCGGTCTTTGATCAGGCATTCACCAAAGTGGTAACGACGCCAGCTGATGCATTGCAACCGTTGATTCCGGCGGCACAAACTTTCACGCAACAACTGGTGATGGTTGGAGACTACATTGCTCAGCAAGGTACTCAGGTGAGCTTTGTCGCAAATGGCATCCAGTTCCCGACTTCACAGCAGGCAAGTGAATATAACAAACTGATTGCGCCATTACCGGCACAGCATCAGGCGTTTAATCAGGCCTGGACTACAGCAGTTACTGCAACCCAATAA", - "dna_sequence_length": 711, - "functions": [ - "barrier effect co-colonization resistance 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"gene_synonym", - "ECK3542" - ] - ], - "dna_sequence": "ATGGAATATAAAGATCCAATGCATGAGCTGTTGAGCAGCCTGGAACAGATTGTTTTTAAAGATGAAACGCAGAAAATTACCCTGACGCACAGAACAACGTCCTGTACCGAAATTGAGCAGTTACGAAAAGGGACAGGATTAAAAATCGATGATTTCGCCCGGGTTTTGGGCGTATCAGTCGCCATGGTAAAGGAATGGGAATCCAGACGCGTGAAGCCTTCAAGTGCCGAACTAAAATTGATGCGTTTGATTCAAGCCAACCCGGCATTAAGTAAGCAGTTGATGGAATAG", - "dna_sequence_length": 291, - "functions": [ - "HTH_CROC1 family putative transcriptional regulator" - ], - "id": "CDS_3492", - "location": [ - [ - "NC_000913", - 3719478, - "+", - 291 - ] - ], - "md5": "c335fbca49676583d146ca2e03caf2e8", - "parent_gene": "", - "protein_md5": "f482944325ae85c7e9a4624ec771d036", - "protein_translation": "MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME", - "protein_translation_length": 96, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418012.1" - ], - [ - "gene_synonym", - "JW3525" - ], - [ - "gene_synonym", - "EcoGene:EG10166" - ], - [ - "gene_synonym", - "b3556" - ], - [ - "gene_synonym", - "GeneID:948070" - ], - [ - "gene_synonym", - "ASAP:ABE-0011616" - ], - [ - "gene_synonym", - "GI:16131427" - ], - [ - "gene_synonym", - "cspA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9X9" - ], - [ - "gene_synonym", - "ECK3543" - ] - ], - "dna_sequence": "ATGTCCGGTAAAATGACTGGTATCGTAAAATGGTTCAACGCTGACAAAGGCTTCGGCTTCATCACTCCTGACGATGGCTCTAAAGATGTGTTCGTACACTTCTCTGCTATCCAGAACGATGGTTACAAATCTCTGGACGAAGGTCAGAAAGTGTCCTTCACCATCGAAAGCGGCGCTAAAGGCCCGGCAGCTGGTAACGTAACCAGCCTGTAA", - "dna_sequence_length": 213, - "functions": [ - "RNA chaperone and antiterminator, cold-inducible" - ], - "id": "CDS_3493", - "location": [ - [ - "NC_000913", - 3720049, - "+", - 213 - ] - ], - "md5": "feb1dd1c0e17d9471041d15e82447327", - "parent_gene": "", - "protein_md5": "40785a8282413070fe126dfd41e458ff", - "protein_translation": "MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL", - "protein_translation_length": 70, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4448" - ], - [ - "gene_synonym", - "EcoGene:EG14436" - ], - [ - "gene_synonym", - "mokA" - ], - [ - "gene_synonym", - "GeneID:5625573" - ], - [ - "gene_synonym", - "b4647" - ] - ], - "dna_sequence": "TACTCGTTGGAAATCAACACAGGAGGCTGGGAATGCCGCAGAAATATAGATTACTTTCTTTAATAGTGATTTGTTTCACGCTTTTATTTTTCACCTGGATGATAAGAGATTCACTGTGTGAATTGCATATTAAACAGGAGAGTTATGAGCTGGCGGCGTTTTTAGCCTGCAAATTGAAAGAGTAA", - "dna_sequence_length": 185, - "id": "CDS_3494", - "location": [ - [ - "NC_000913", - 3720632, - "-", - 185 - ] - ], - "md5": "71bbb3a648f31e58c3f635bab578467c", - "parent_gene": "", - "protein_md5": "d12b8c3799576fa0f6882a3b264a3583", - "protein_translation": "YSLEINTGGWECRRNIDYFL", - "protein_translation_length": 20, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12346" - ], - [ - "gene_synonym", - "GeneID:2847732" - ], - [ - "gene_synonym", - "b4455" - ], - [ - "gene_synonym", - "yiaZ" - ], - [ - "gene_synonym", - "JW3526" - ], - [ - "gene_synonym", - "ASAP:ABE-0047285" - ], - [ - "gene_synonym", - "ECK3544" - ], - [ - "gene_synonym", - "GI:49176371" - ], - [ - "gene_synonym", - "hokA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37305" - ], - [ - "gene_synonym", - "YP_026229.1" - ] - ], - "dna_sequence": "ATGCCGCAGAAATATAGATTACTTTCTTTAATAGTGATTTGTTTCACGCTTTTATTTTTCACCTGGATGATAAGAGATTCACTGTGTGAATTGCATATTAAACAGGAGAGTTATGAGCTGGCGGCGTTTTTAGCCTGCAAATTGAAAGAGTAA", - "dna_sequence_length": 153, - "functions": [ - "toxic polypeptide, small" - ], - "id": "CDS_3495", - "location": [ - [ - "NC_000913", - 3720600, - "-", - 153 - ] - ], - "md5": "37f179e0889cd15c7c9f7ca70c466c56", - "parent_gene": "", - "protein_md5": "675678ed15c3e500584ca420074d8870", - "protein_translation": "MPQKYRLLSLIVICFTLLFFTWMIRDSLCELHIKQESYELAAFLACKLKE", - "protein_translation_length": 50, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011620" - ], - [ - "gene_synonym", - "insJ" - ], - [ - "gene_synonym", - "b3557" - ], - [ - "gene_synonym", - "GI:16131428" - ], - [ - "gene_synonym", - "GeneID:948082" - ], - [ - "gene_synonym", - "NP_418014.1" - ], - [ - "gene_synonym", - "ECK3545" - ], - [ - "gene_synonym", - "EcoGene:EG40010" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P19768" - ] - ], - "dna_sequence": "ATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGCACGTTTTGGTGTCCCCCGAACCCAGGTCAGGACATGGGTTGCCCTCTATGAAAAACATGGAGAAAAAGGTTTAATTCCCAAACCTAAAGGCGTTAGTGCTGATCCAGAGTTGCGTATTAAGGTCGTGAAAGCTGTGATCGAGCAGCACATGTCCCTTAATCAGGCTGCTGCTCACTTTATGCTTGCTGGTAGTGGTTCTGTAGCCAGGTGGCTGAAGGTCTATGAAGAGCGCGGAGAAGCTGGTTTACGCGCGCTCAAGATTGGCACCAAAAGAAACATTGCAATATCAGTTGATCCAGAAAAAGCGGCATCAGCATTGGAGCTGTCAAAAGACCGACGCATTGAGGATCTTGAAAGGCAAGTTCGATTTCTTGAAACGCGGCTTATGTATCTAAAAAAGCTGAAAGCCTTAGCTCATCCCACGAAAAAGTGA", - "dna_sequence_length": 522, - "functions": [ - "IS150 transposase A" - ], - "id": "CDS_3496", - "location": [ - [ - "NC_000913", - 3720680, - "+", - 522 - ] - ], - "md5": "909f4d0ded7e31bcf20a657ad46ef4aa", - "parent_gene": "", - "protein_md5": "6b5dab8665664d9033bada6077f9f47a", - "protein_translation": "MSKPKYPFEKRLEVVNHYFTTDDGYRIISARFGVPRTQVRTWVALYEKHGEKGLIPKPKGVSADPELRIKVVKAVIEQHMSLNQAAAHFMLAGSGSVARWLKVYEERGEAGLRALKIGTKRNIAISVDPEKAASALELSKDRRIEDLERQVRFLETRLMYLKKLKALAHPTKK", - "protein_translation_length": 173, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011622" - ], - [ - "gene_synonym", - "EcoGene:EG40011" - ], - [ - "gene_synonym", - "NP_418015.1" - ], - [ - "gene_synonym", - "insK" - ], - [ - "gene_synonym", - "dinS" - ], - [ - "gene_synonym", - "GeneID:948081" - ], - [ - "gene_synonym", - "GI:16131429" - ], - [ - "gene_synonym", - "ECK3546" - ], - [ - "gene_synonym", - "b3558" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P19769" - ] - ], - "dna_sequence": "GTGAAAGTACTCAACGAGCTAAGGCAGTTTTATCCTCTTGATGAGCTTCTCAGGGCTGCGGAGATACCGCGCAGTACGTTTTATTATCATCTAAAGGCTCTCAGCAAGCCTGACAAGTATGCGGACGTTAAAAAGCGTATTAGTGAGATTTATCACGAGAATAGAGGCCGATACGGATACCGTAGGGTAACGCTGTCTCTTCATCGAGAAGGGAAACAGATTAACCATAAAGCTGTTCAGCGCCTGATGGGAACCCTCTCACTTAAAGCAGCGATTAAGGTCAAGCGATACCGCTCTTACAGAGGAGAGGTAGGGCAAACCGCCCCTAATGTTCTCCAAAGAGATTTCAAGGCTACGCGGCCAAACGAGAAGTGGGTTACCGATGTTACTGAATTTGCAGTCAATGGGCGCAAGCTGTATTTGTCTCCAGTAATAGATCTCTTCAACAACGAAGTTATTTCTTACAGCCTTTCGGAAAGACCAGTGATGAACATGGTTGAGAATATGCTCGATCAGGCATTCAAAAAGCTTAATCCTCACGAGCATCCTGTTCTGCACTCTGACCAGGGATGGCAGTATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAA", - "dna_sequence_length": 852, - "functions": [ - "IS150 transposase B" - ], - "id": "CDS_3497", - "location": [ - [ - "NC_000913", - 3721198, - "+", - 852 - ] - ], - "md5": "c902c3cab800012fc62b727383726630", - "parent_gene": "", - "protein_md5": "9578529d28e8fa506eb04349ac75f63f", - "protein_translation": "MKVLNELRQFYPLDELLRAAEIPRSTFYYHLKALSKPDKYADVKKRISEIYHENRGRYGYRRVTLSLHREGKQINHKAVQRLMGTLSLKAAIKVKRYRSYRGEVGQTAPNVLQRDFKATRPNEKWVTDVTEFAVNGRKLYLSPVIDLFNNEVISYSLSERPVMNMVENMLDQAFKKLNPHEHPVLHSDQGWQYRMRRYQNILKEHGIKQSMSRKGNCLDNAVVECFFGTLKSECFYLDEFSNISELKDAVTEYIEYYNSRRISLKLKGLTPIEYRNQTYMPRV", - "protein_translation_length": 283, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "glyS" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00961" - ], - [ - "gene_synonym", - "NP_418016.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011624" - ], - [ - "gene_synonym", - "JW3530" - ], - [ - "gene_synonym", - "b3559" - ], - [ - "gene_synonym", - "GI:16131430" - ], - [ - "gene_synonym", - "GeneID:948080" - ], - [ - "gene_synonym", - "ECK3547" - ], - [ - "gene_synonym", - "gly-act" - ], - [ - "gene_synonym", - "EcoGene:EG10410" - ] - ], - "dna_sequence": "ATGTCTGAGAAAACTTTTCTGGTGGAAATCGGCACTGAAGAGCTGCCACCAAAAGCACTGCGCAGCCTGGCTGAGTCCTTTGCTGCGAACTTTACTGCGGAGCTGGATAACGCTGGCCTCGCACACGGCACCGTTCAATGGTTTGCTGCTCCGCGTCGTCTGGCGCTGAAAGTAGCTAACCTGGCGGAAGCGCAACCGGATCGTGAAATCGAAAAACGCGGCCCGGCGATTGCCCAGGCGTTCGACGCTGAAGGCAAACCGAGCAAAGCGGCAGAAGGTTGGGCGCGTGGTTGCGGTATTACCGTTGACCAGGCTGAGCGTCTGACTACCGATAAAGGCGAATGGCTGCTGTATCGCGCCCATGTGAAGGGCGAAAGCACCGAAGCACTGCTGCCGAATATGGTTGCGACTTCTCTGGCGAAACTGCCGATCCCGAAACTGATGCGTTGGGGCGCAAGCGACGTGCACTTCGTGCGTCCGGTGCACACCGTGACCCTGCTGCTGGGCGACAAAGTCATTCCGGCAACCATTCTGGGCATTCAGTCCGATCGCGTGATTCGCGGCCACCGCTTTATGGGCGAGCCGGAATTCACCATCGATAACGCCGATCAGTATCCGGAAATTCTGCGTGAGCGTGGGAAAGTCATCGCCGATTACGAAGAACGTAAGGCGAAGATTAAAGCCGATGCCGAAGAAGCAGCGCGTAAGATTGGCGGTAACGCTGACTTAAGCGAAAGCCTGCTGGAAGAAGTGGCTTCGCTGGTGGAGTGGCCGGTCGTTCTGACCGCAAAATTCGAAGAGAAATTCCTCGCGGTGCCGGCTGAAGCGCTGGTTTACACCATGAAAGGTGACCAGAAATACTTCCCGGTGTATGCGAACGACGGCAAACTGCTGCCGAACTTTATCTTCGTTGCCAACATCGAATCGAAAGATCCGCAGCAGATTATCTCCGGTAACGAGAAAGTCGTTCGTCCGCGTCTGGCGGATGCCGAGTTCTTCTTCAACACCGACCGTAAAAAACGTCTTGAAGATAACCTGCCGCGCCTGCAAACCGTGTTGTTCCAGCAACAGTTGGGGACGCTGCGCGACAAAACTGACCGCATCCAGGCGCTGGCTGGCTGGATTGCTGAACAGATTGGCGCTGACGTTAACCACGCTACCCGTGCGGGTCTGCTGTCTAAGTGCGACCTGATGACCAACATGGTCTTCGAGTTCACCGACACCCAGGGCGTTATGGGGATGCACTATGCGCGTCACGATGGCGAAGCGGAAGATGTCGCGGTGGCGCTGAATGAGCAGTATCAGCCGCGTTTTGCTGGTGATGACCTGCCGTCCAACCCAGTAGCTTGTGCGCTGGCGATTGCTGACAAGATGGATACCCTGGCGGGTATCTTCGGTATCGGTCAGCATCCGAAAGGCGACAAAGACCCGTTTGCGCTGCGTCGTGCCGCGCTTGGCGTGCTGCGAATTATCGTTGAGAAGAACCTCAACCTTGATCTGCAAACGCTGACCGAAGAAGCGGTGCGTCTGTATGGCGATAAGCTGACTAATGCCAACGTAGTTGATGATGTTATCGACTTTATGCTCGGTCGCTTCCGCGCCTGGTATCAGGACGAAGGTTATACCGTTGACACCATCCAGGCGGTACTGGCGCGTCGTCCGACTCGTCCGGCTGATTTCGATGCCCGTATGAAAGCGGTATCGCATTTCCGTACCCTGGATGCAGCTGCTGCACTGGCGGCGGCGAACAAACGTGTATCTAACATTCTGGCGAAATCTGACGAAGTGCTGAGCGACCGCGTGAATGCCTCTACCCTGAAAGAGCCGGAAGAAATTAAACTGGCGATGCAGGTTGTGGTGCTACGTGACAAGCTGGAGCCGTACTTTACGGAAGGTCGTTACCAGGATGCGCTGGTCGAACTGGCTGAGCTGCGTGAACCGGTTGATGCTTTCTTCGATAAAGTGATGGTCATGGTTGATGACAAAGAATTGCGTATCAACCGTCTGACCATGCTGGAGAAACTGCGCGAACTGTTCCTGCGCGTTGCGGATATTTCGCTGTTGCAATAA", 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"MSEKTFLVEIGTEELPPKALRSLAESFAANFTAELDNAGLAHGTVQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITVDQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRPVHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIADYEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEALVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFFNTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVACALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAVRLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKAVSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDKLEPYFTEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRINRLTMLEKLRELFLRVADISLLQ", - "protein_translation_length": 689, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "glyS" - ], - [ - "gene_synonym", - "glyQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0011626" - ], - [ - "gene_synonym", - "JW3531" - ], - [ - "gene_synonym", - "b3560" - ], - [ - "gene_synonym", - "cfcA" - ], - [ - "gene_synonym", - "GeneID:948079" - ], - [ - "gene_synonym", - "GI:16131431" - ], - [ - "gene_synonym", - "ECK3548" - ], - [ - "gene_synonym", - "EcoGene:EG10409" - ], - [ - "gene_synonym", - "NP_418017.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00960" - ] - ], - "dna_sequence": "ATGCAAAAGTTTGATACCAGGACCTTCCAGGGCTTGATCCTGACCTTACAGGATTACTGGGCTCGCCAGGGCTGCACCATTGTTCAACCATTGGACATGGAAGTCGGCGCGGGAACCTCTCACCCAATGACCTGTCTGCGCGAGCTGGGGCCAGAACCGATGGCGGCTGCTTATGTTCAGCCTTCTCGTCGCCCGACCGATGGTCGCTACGGCGAAAACCCCAACCGTTTACAGCACTACTATCAGTTCCAGGTGGTCATTAAGCCATCGCCGGACAATATTCAGGAGCTGTACCTCGGTTCTCTGAAAGAGCTGGGCATGGACCCGACTATTCACGACATCCGTTTCGTGGAAGATAACTGGGAAAACCCGACGCTGGGTGCCTGGGGACTGGGCTGGGAAGTGTGGCTGAACGGCATGGAAGTGACGCAGTTCACTTACTTCCAGCAGGTTGGTGGTCTGGAGTGTAAACCGGTTACCGGCGAGATCACCTACGGTCTGGAACGTCTGGCCATGTACATTCAGGGCGTAGACAGCGTTTACGACCTGGTCTGGAGCGACGGCCCGCTGGGTAAAACCACCTACGGCGACGTGTTCCATCAGAACGAAGTGGAGCAGTCCACTTACAACTTCGAATACGCGGATGTGGACTTCCTGTTCACCTGCTTCGAGCAGTACGAGAAAGAAGCGCAGCAGCTGCTGGCGCTGGAAAATCCGCTGCCGCTGCCAGCCTACGAGCGTATTCTGAAAGCCGCCCACAGCTTCAACCTGCTGGATGCGCGTAAAGCCATCTCCGTCACCGAGCGTCAGCGCTACATTCTGCGCATTCGCACCCTGACCAAAGCAGTGGCAGAAGCATACTACGCTTCCCGTGAAGCCCTCGGCTTCCCGATGTGCAACAAAGATAAGTAA", - "dna_sequence_length": 912, - "functions": [ - "glycine tRNA synthetase, alpha subunit" - ], - "id": "CDS_3499", - "location": [ - [ - "NC_000913", - 3725318, - "-", - 912 - ] - ], - "md5": "9d1976e1f8a0243d8dc6e99d6c831fb1", - "parent_gene": "", - "protein_md5": "4f3be65d3506acd42538ea72f62baa95", - "protein_translation": "MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRELGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSLKELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCNKDK", - "protein_translation_length": 303, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0285074" - ], - [ - "gene_synonym", - "EcoGene:EG14400" - ], - [ - "gene_synonym", - "b4553" - ], - [ - "gene_synonym", - "GeneID:1450292" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q2M7M3" - ], - [ - "gene_synonym", - "JW3532" - ], - [ - "gene_synonym", - "ECK3549" - ], - [ - "gene_synonym", - "GI:94541126" - ], - [ - "gene_synonym", - "ysaB" - ], - [ - "gene_synonym", - "YP_588469.1" - ] - ], - "dna_sequence": "ATGATGATGAACGCTTTCTTTCCGGCAATGGCGCTTATGGTGCTAGTGGGTTGTTCTATACCGTCACCCGTGCAGAAAGCACAACGGGTAAAGGTTGATCCTCTGCGTTCGTTGAATATGGAAGCGTTATGCAAGGATCAGGCGGCAAAACGTTATAACACCGGCGAGCAAAAAATCGACGTCACCGCCTTCGAACAGTTCCAGGGAAGCTATGAAATGCGCGGTTATACCTTCCGTAAAGAGCAGTTTGTCTGTTCTTTTGACGCGGATGGCCATTTTTTGCATCTTTCCATGCGTTAA", - "dna_sequence_length": 300, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_3500", - "location": [ - [ - "NC_000913", - 3725712, - "-", - 300 - ] - ], - "md5": "b937f1b2d0983c6c3743b82dde001903", - "parent_gene": "", - "protein_md5": "92010e6a65242879d952d15f1a9a47f3", - "protein_translation": "MMMNAFFPAMALMVLVGCSIPSPVQKAQRVKVDPLRSLNMEALCKDQAAKRYNTGEQKIDVTAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR", - "protein_translation_length": 99, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011630" - ], - [ - "gene_synonym", - "wecH" - ], - [ - "gene_synonym", - "JW3533" - ], - [ - "gene_synonym", - "NP_418018.1" - ], - [ - "gene_synonym", - "b3561" - ], - [ - "gene_synonym", - "GI:16131432" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37669" - ], - [ - "gene_synonym", - "yiaH" - ], - [ - "gene_synonym", - "EcoGene:EG12274" - ], - [ - "gene_synonym", - "GeneID:948077" - ], - [ - "gene_synonym", - "ECK3550" - ] - ], - "dna_sequence": "ATGCAGCCCAAAATTTACTGGATTGATAACCTGCGAGGGATAGCGTGTTTAATGGTGGTGATGATTCACACCACTACCTGGTATGTGACCAATGCTCATAGTGTTAGCCCCGTCACATGGGATATCGCCAATGTTCTGAATTCTGCCTCTCGTGTCAGCGTGCCGCTATTTTTCATGATTTCCGGCTATCTCTTTTTTGGCGAACGCAGCGCCCAGCCGCGCCATTTCTTGCGTATCGGCTTATGTCTGATTTTTTATAGCGCAATCGCACTGCTCTACATTGCGCTGTTTACCTCCATCAATATGGAGTTAGCGCTGAAAAACCTGCTGCAAAAGCCAGTGTTTTACCACTTGTGGTTTTTCTTCGCGATTGCGGTGATTTATCTGGTTTCACCGCTGATTCAGGTGAAGAACGTCGGCGGAAAAATGTTGCTGGTGCTAATGGCGGTGATTGGCATTATCGCTAACCCAAACACAGTGCCGCAGAAAATTGACGGTTTTGAATGGCTGCCAATTAACTTATATATCAATGGCGATACTTTTTACTACATTCTGTATGGCATGTTGGGCCGCGCTATAGGGATGATGGACACACAGCATAAAGCACTGTCGTGGGTGAGCGCCGCGCTGTTTGCGACGGGGGTTTTTATTATCTCTCGCGGGACATTATATGAATTGCAGTGGCGCGGAAATTTTGCCGATACCTGGTATCTTTACTGTGGGCCGATGGTTTTTATCTGCGCAATCGCGCTATTGACTCTGGTTAAAAACACGCTGGATACGCGTACCATTCGCGGACTTGGCTTAATCTCCCGCCATTCATTGGGTATATACGGATTCCACGCCTTGATTATCCATGCGCTGCGCACCCGGGGAATTGAGCTTAAAAATTGGCCAATACTGGATATTATTTGGATCTTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAA", - "dna_sequence_length": 996, - "functions": [ - "O-acetyltransferase for enterobacterial common antigen (ECA)" - ], - "id": "CDS_3501", - "location": [ - [ - "NC_000913", - 3725887, - "+", - 996 - ] - ], - "md5": "5105c868c49fd9244dd812fad5faeecd", - "parent_gene": "", - "protein_md5": "24a9a6f693fb27ea4dd299486ff6398b", - "protein_translation": "MQPKIYWIDNLRGIACLMVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMISGYLFFGERSAQPRHFLRIGLCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLWFFFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNTVPQKIDGFEWLPINLYINGDTFYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADTWYLYCGPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGIELKNWPILDIIWIFCATLAASLLLSMLVQRIDRNRLVS", - "protein_translation_length": 331, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADJ8" - ], - [ - "gene_synonym", - "ASAP:ABE-0011632" - ], - [ - "gene_synonym", - "NP_418019.4" - ], - [ - "gene_synonym", - "JW3534" - ], - [ - "gene_synonym", - "b3562" - ], - [ - "gene_synonym", - "yiaA" - ], - [ - "gene_synonym", - "GeneID:948078" - ], - [ - "gene_synonym", - "EcoGene:EG11186" - ], - [ - "gene_synonym", - "GI:90111616" - ], - [ - "gene_synonym", - "ECK3551" - ] - ], - "dna_sequence": "ATGGACAACAAAATATCAACCTATTCACCGGCCTTTAGTATTGTGTCATGGATAGCTCTCGTTGGTGGTATCGTTACCTATCTGTTAGGGCTATGGAATGCAGAGATGCAGTTAAATGAAAAAGGATATTATTTTGCCGTACTGGTATTAGGACTGTTTTCTGCGGCGTCTTATCAAAAGACCGTTCGGGACAAGTATGAAGGCATACCGACCACTTCCATTTATTATATGACCTGCCTGACTGTCTTTATTATCTCTGTTGCATTACTGATGGTAGGTCTGTGGAATGCGACATTATTACTCAGCGAAAAAGGTTTTTATGGACTGGCTTTCTTCTTAAGCTTGTTTGGTGCAGTAGCGGTGCAGAAAAATATTCGTGATGCCGGAATAAACCCACCAAAAGAAACACAGGTTACCCAGGAAGAATACAGCGAATAA", - "dna_sequence_length": 438, - "functions": [ - "YiaAB family inner membrane protein, tandem domains" - ], - "id": "CDS_3502", - "location": [ - [ - "NC_000913", - 3727361, - "-", - 438 - ] - ], - "md5": "7328da6b1107d9cd5ebf7780281923dd", - "parent_gene": "", - "protein_md5": "442cacac4b05bd9bbbd47ce5e97f840e", - "protein_translation": "MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE", - "protein_translation_length": 145, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011634" - ], - [ - "gene_synonym", - "NP_418020.2" - ], - [ - "gene_synonym", - "b3563" - ], - [ - "gene_synonym", - "JW5654" - ], - [ - "gene_synonym", - "yiaB" - ], - [ - "gene_synonym", - "GeneID:948152" - ], - [ - "gene_synonym", - "GI:90111617" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11286" - ], - [ - "gene_synonym", - "EcoGene:EG11267" - ], - [ - "gene_synonym", - "ECK3552" - ] - ], - "dna_sequence": "ATGAAAACCTCAAAGACTGTGGCAAAACTATTATTTGTTGTCGGGGCGCTGGTTTATCTGGTTGGGCTATGGATCTCATGCCCATTGTTAAGTGGAAAAGGCTATTTTCTTGGCGTGTTAATGACAGCAACTTTTGGCAACTATGCATATCTTCGCGCAGAAAAACTCGGGCAACTGGATGATTTTTTTACCCATATCTGCCAGTTAGTTGCGTTAATCACTATCGGTCTCTTGTTTATCGGTGTTTTAAACGCACCTATCAATACTTATGAAATGGTGATCTATCCCATCGCCTTTTTTGTCTGCTTGTTTGGTCAAATGCGTTTGTTTCGCTCGGCATGA", - "dna_sequence_length": 342, - "functions": [ - "YiaAB family inner membrane protein" - ], - "id": "CDS_3503", - "location": [ - [ - "NC_000913", - 3727748, - "-", - 342 - ] - ], - "md5": "22f13afe33fa163db21807b9b80bec88", - "parent_gene": "", - "protein_md5": "b35b745ff72ec9fc3114a4af1c25c91f", - "protein_translation": "MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTATFGNYAYLRAEKLGQLDDFFTHICQLVALITIGLLFIGVLNAPINTYEMVIYPIAFFVCLFGQMRLFRSA", - "protein_translation_length": 113, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011637" - ], - [ - "gene_synonym", - "b3564" - ], - [ - "gene_synonym", - "JW3536" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09099" - ], - [ - "gene_synonym", - "GeneID:948133" - ], - [ - "gene_synonym", - "EcoGene:EG11075" - ], - [ - "gene_synonym", - "GI:16131435" - ], - [ - "gene_synonym", - "xylB" - ], - [ - "gene_synonym", - "ECK3553" - ], - [ - "gene_synonym", - "NP_418021.1" - ] - ], - "dna_sequence": "ATGTATATCGGGATAGATCTTGGCACCTCGGGCGTAAAAGTTATTTTGCTCAACGAGCAGGGTGAGGTGGTTGCTGCGCAAACGGAAAAGCTGACCGTTTCGCGCCCGCATCCACTCTGGTCGGAACAAGACCCGGAACAGTGGTGGCAGGCAACTGATCGCGCAATGAAAGCTCTGGGCGATCAGCATTCTCTGCAGGACGTTAAAGCATTGGGTATTGCCGGCCAGATGCACGGAGCAACCTTGCTGGATGCTCAGCAACGGGTGTTACGCCCTGCCATTTTGTGGAACGACGGGCGCTGTGCGCAAGAGTGCACTTTGCTGGAAGCGCGAGTTCCGCAATCGCGGGTGATTACCGGCAACCTGATGATGCCCGGATTTACTGCGCCTAAATTGCTATGGGTTCAGCGGCATGAGCCGGAGATATTCCGTCAAATCGACAAAGTATTATTACCGAAAGATTACTTGCGTCTGCGTATGACGGGGGAGTTTGCCAGCGATATGTCTGACGCAGCTGGCACCATGTGGCTGGATGTCGCAAAGCGTGACTGGAGTGACGTCATGCTGCAGGCTTGCGACTTATCTCGTGACCAGATGCCCGCATTATACGAAGGCAGCGAAATTACTGGTGCTTTGTTACCTGAAGTTGCGAAAGCGTGGGGTATGGCGACGGTGCCAGTTGTCGCAGGCGGTGGCGACAATGCAGCTGGTGCAGTTGGTGTGGGAATGGTTGATGCTAATCAGGCAATGTTATCGCTGGGGACGTCGGGGGTCTATTTTGCTGTCAGCGAAGGGTTCTTAAGCAAGCCAGAAAGCGCCGTACATAGCTTTTGCCATGCGCTACCGCAACGTTGGCATTTAATGTCTGTGATGCTGAGTGCAGCGTCGTGTCTGGATTGGGCCGCGAAATTAACCGGCCTGAGCAATGTCCCAGCTTTAATCGCTGCAGCTCAACAGGCTGATGAAAGTGCCGAGCCAGTTTGGTTTCTGCCTTATCTTTCCGGCGAGCGTACGCCACACAATAATCCCCAGGCGAAGGGGGTTTTCTTTGGTTTGACTCATCAACATGGCCCCAATGAACTGGCGCGAGCAGTGCTGGAAGGCGTGGGTTATGCGCTGGCAGATGGCATGGATGTCGTGCATGCCTGCGGTATTAAACCGCAAAGTGTTACGTTGATTGGGGGCGGGGCGCGTAGTGAGTACTGGCGTCAGATGCTGGCGGATATCAGCGGTCAGCAGCTCGATTACCGTACGGGGGGGGATGTGGGGCCAGCACTGGGCGCAGCAAGGCTGGCGCAGATCGCGGCGAATCCAGAGAAATCGCTCATTGAATTGTTGCCGCAACTACCGTTAGAACAGTCGCATCTACCAGATGCGCAGCGTTATGCCGCTTATCAGCCACGACGAGAAACGTTCCGTCGCCTCTATCAGCAACTTCTGCCATTAATGGCGTAA", - "dna_sequence_length": 1455, - "functions": [ - "xylulokinase" - ], - "id": "CDS_3504", - "location": [ - [ - "NC_000913", - 3729371, - "-", - 1455 - ] - ], - "md5": "3766c3ff7ef012185ec9e9b3b5717335", - "parent_gene": "", - "protein_md5": "4f9001d2fe0e53e02c47bc828b59a67f", - "protein_translation": "MYIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRMTGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGLSNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAYQPRRETFRRLYQQLLPLMA", - "protein_translation_length": 484, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418022.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00944" - ], - [ - "gene_synonym", - "b3565" - ], - [ - "gene_synonym", - "ASAP:ABE-0011639" - ], - [ - "gene_synonym", - "JW3537" - ], - [ - "gene_synonym", - "GeneID:948141" - ], - [ - "gene_synonym", - "EcoGene:EG11074" - ], - [ - "gene_synonym", - "GI:16131436" - ], - [ - "gene_synonym", - "xylA" - ], - [ - "gene_synonym", - "ECK3554" - ] - ], - "dna_sequence": "ATGCAAGCCTATTTTGACCAGCTCGATCGCGTTCGTTATGAAGGCTCAAAATCCTCAAACCCGTTAGCATTCCGTCACTACAATCCCGACGAACTGGTGTTGGGTAAGCGTATGGAAGAGCACTTGCGTTTTGCCGCCTGCTACTGGCACACCTTCTGCTGGAACGGGGCGGATATGTTTGGTGTGGGGGCGTTTAATCGTCCGTGGCAGCAGCCTGGTGAGGCACTGGCGTTGGCGAAGCGTAAAGCAGATGTCGCATTTGAGTTTTTCCACAAGTTACATGTGCCATTTTATTGCTTCCACGATGTGGATGTTTCCCCTGAGGGCGCGTCGTTAAAAGAGTACATCAATAATTTTGCGCAAATGGTTGATGTCCTGGCAGGCAAGCAAGAAGAGAGCGGCGTGAAGCTGCTGTGGGGAACGGCCAACTGCTTTACAAACCCTCGCTACGGCGCGGGTGCGGCGACGAACCCAGATCCTGAAGTCTTCAGCTGGGCGGCAACGCAAGTTGTTACAGCGATGGAAGCAACCCATAAATTGGGCGGTGAAAACTATGTCCTGTGGGGCGGTCGTGAAGGTTACGAAACGCTGTTAAATACCGACTTGCGTCAGGAGCGTGAACAACTGGGCCGCTTTATGCAGATGGTGGTTGAGCATAAACATAAAATCGGTTTCCAGGGCACGTTGCTTATCGAACCGAAACCGCAAGAACCGACCAAACATCAATATGATTACGATGCCGCGACGGTCTATGGCTTCCTGAAACAGTTTGGTCTGGAAAAAGAGATTAAACTGAACATTGAAGCTAACCACGCGACGCTGGCAGGTCACTCTTTCCATCATGAAATAGCCACCGCCATTGCGCTTGGCCTGTTCGGTTCTGTCGACGCCAACCGTGGCGATGCGCAACTGGGCTGGGACACCGACCAGTTCCCGAACAGTGTGGAAGAGAATGCGCTGGTGATGTATGAAATTCTCAAAGCAGGCGGTTTCACCACCGGTGGTCTGAACTTCGATGCCAAAGTACGTCGTCAAAGTACTGATAAATATGATCTGTTTTACGGTCATATCGGCGCGATGGATACGATGGCACTGGCGCTGAAAATTGCAGCGCGCATGATTGAAGATGGCGAGCTGGATAAACGCATCGCGCAGCGTTATTCCGGCTGGAATAGCGAATTGGGCCAGCAAATCCTGAAAGGCCAAATGTCACTGGCAGATTTAGCCAAATATGCTCAGGAACATCATTTGTCTCCGGTGCATCAGAGTGGTCGCCAGGAACAACTGGAAAATCTGGTAAACCATTATCTGTTCGACAAATAA", - "dna_sequence_length": 1323, - "functions": [ - "D-xylose isomerase" - ], - "id": "CDS_3505", - "location": [ - [ - "NC_000913", - 3730765, - "-", - 1323 - ] - ], - "md5": "8f792077f78fea52811e2cb619fcfd55", - "parent_gene": "", - "protein_md5": "547b8ae97de5f7bdf88ee5887850c66e", - "protein_translation": "MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRFAACYWHTFCWNGADMFGVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHDVDVSPEGASLKEYINNFAQMVDVLAGKQEESGVKLLWGTANCFTNPRYGAGAATNPDPEVFSWAATQVVTAMEATHKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTKHQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAGHSFHHEIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAARMIEDGELDKRIAQRYSGWNSELGQQILKGQMSLADLAKYAQEHHLSPVHQSGRQEQLENLVNHYLFDK", - "protein_translation_length": 440, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3538" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37387" - ], - [ - "gene_synonym", - "EcoGene:EG20252" - ], - [ - "gene_synonym", - "b3566" - ], - [ - "gene_synonym", - "NP_418023.1" - ], - [ - "gene_synonym", - "xylT" - ], - [ - "gene_synonym", - "GI:16131437" - ], - [ - "gene_synonym", - "ASAP:ABE-0011646" - ], - [ - "gene_synonym", - "ECK3555" - ], - [ - "gene_synonym", - "GeneID:948090" - ], - [ - "gene_synonym", - "xylF" - ] - ], - "dna_sequence": "ATGAAAATAAAGAACATTCTACTCACCCTTTGCACCTCACTCCTGCTTACCAACGTTGCTGCACACGCCAAAGAAGTCAAAATAGGTATGGCGATTGATGATCTCCGTCTTGAACGCTGGCAAAAAGATCGAGATATCTTTGTGAAAAAGGCAGAATCTCTCGGCGCGAAAGTATTTGTACAGTCTGCAAATGGCAATGAAGAAACACAAATGTCGCAGATTGAAAACATGATAAACCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCGCGCCGGACAAATGAAAGTGTTAAAACCTTACGTTGATTCCGGAAAAATTAAAGTCGTTGGTGACCAATGGGTTGATGGCTGGTTACCGGAAAACGCATTGAAAATTATGGAAAACGCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAA", - "dna_sequence_length": 993, - "functions": [ - "D-xylose transporter subunit" - ], - "id": "CDS_3506", - "location": [ - [ - "NC_000913", - 3731131, - "+", - 993 - ] - ], - "md5": "18ba9bfeeee1c6131ebffb1277e7103d", - "parent_gene": "", - "protein_md5": "9e37d82f87e534925975eadfe2674218", - "protein_translation": "MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL", - "protein_translation_length": 330, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3539" - ], - [ - "gene_synonym", - "GeneID:948127" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37388" - ], - [ - "gene_synonym", - "b3567" - ], - [ - "gene_synonym", - "xylG" - ], - [ - "gene_synonym", - "ASAP:ABE-0011648" - ], - [ - "gene_synonym", - "ECK3556" - ], - [ - "gene_synonym", - "GI:16131438" - ], - [ - "gene_synonym", - "EcoGene:EG12275" - ], - [ - "gene_synonym", - "NP_418024.1" - ] - ], - "dna_sequence": "ATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACGCTGTCAGAAGCTGCTCGCACAGGTCAGTTTATCCATTTCACCTGATACCCGCGTTGGCGATTTAGGGCTTGGGCAACAACAACTGGTTGAAATTGCCAAGGCACTTAATAAACAGGTGCGCTTGTTAATTCTCGATGAACCGACAGCCTCATTAACTGAGCAGGAAACGTCGATTTTACTGGATATTATTCGCGATCTACAACAGCACGGTATCGCCTGTATTTATATTTCGCACAAACTCAACGAAGTCAAAGCGATTTCCGATACGATTTGCGTTATTCGCGACGGACAGCACATTGGTACGCGTGATGCTGCCGGAATGAGTGAAGACGATATTATCACCATGATGGTCGGGCGAGAGTTAACCGCGCTTTACCCTAATGAACCACATACCACCGGAGATGAAATATTACGTATTGAACATCTGACGGCATGGCATCCGGTTAATCGTCATATTAAACGAGTTAATGATGTCTCGTTTTCCCTGAAACGTGGCGAAATATTGGGTATTGCCGGACTCGTTGGTGCCGGACGTACCGAGACCATTCAGTGCCTGTTTGGTGTGTGGCCCGGACAATGGGAAGGAAAAATTTATATTGATGGCAAACAGGTAGATATTCGTAACTGTCAGCAAGCCATCGCCCAGGGGATTGCGATGGTCCCCGAAGACAGAAAGCGCGACGGCATCGTTCCGGTAATGGCGGTTGGTAAAAATATTACCCTCGCCGCACTCAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACCAACTCGTCCAGCAGGGTATTGCCGTTATTGTCATCTCTTCCGAATTACCTGAAGTGCTCGGCCTTAGCGATCGTGTACTGGTGATGCATGAAGGGAAACTAAAAGCCAACCTGATAAATCATAACCTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGA", - "dna_sequence_length": 1542, - "functions": [ - "D-xylose ABC transporter dual domain ATPase" - ], - "id": "CDS_3507", - "location": [ - [ - "NC_000913", - 3732201, - "+", - 1542 - ] - ], - "md5": "bd7d578ec7d3196fab88ab95cb0eec01", - "parent_gene": "", - "protein_md5": "6992519dd8bb5850146e8a3e96a2aba8", - "protein_translation": "MPYLLEMKNITKTFGSVKAIDNVCLRLNAGEIVSLCGENGSGKSTLMKVLCGIYPHGSYEGEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENIFLGNEITHNGIMDYDLMTLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETSILLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDGQHIGTRDAAGMSEDDIITMMVGRELTALYPNEPHTTGDEILRIEHLTAWHPVNRHIKRVNDVSFSLKRGEILGIAGLVGAGRTETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQAIAQGIAMVPEDRKRDGIVPVMAVGKNITLAALNKFTGGISQLDDAAEQKCILESIQQLKVKTSSPDLAIGRLSGGNQQKAILARCLLLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQGIAVIVISSELPEVLGLSDRVLVMHEGKLKANLINHNLTQEQVMEAALRSEHHVEKQSV", - "protein_translation_length": 513, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131439" - ], - [ - "gene_synonym", - "b3568" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGI4" - ], - [ - "gene_synonym", - "JW3540" - ], - [ - "gene_synonym", - "xylH" - ], - [ - "gene_synonym", - "ASAP:ABE-0011650" - ], - [ - "gene_synonym", - "GeneID:948083" - ], - [ - "gene_synonym", - "ECK3557" - ], - [ - "gene_synonym", - "NP_418025.1" - ], - [ - "gene_synonym", - "EcoGene:EG12276" - ] - ], - "dna_sequence": "ATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGTACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTCTGGGACTGCTTCTCGGTGCCTGGAACGGATGGTGGGTCGCGTACCGTAAAGTCCCTTCATTTATTGTCACCCTCGCGGGCATGTTGGCATTTCGCGGCATACTCATTGGCATCACCAACGGCACGACTGTATCCCCCACCAGCGCCGCGATGTCACAAATTGGGCAAAGCTATCTCCCCGCCAGTACCGGCTTCATCATTGGCGCGCTTGGCTTAATGGCTTTTGTTGGTTGGCAATGGCGCGGAAGAATGCGCCGTCAGGCTTTGGGTTTACAGTCTCCGGCCTCTACCGCAGTAGTCGGTCGCCAGGCTTTAACCGCTATCATCGTATTAGGCGCAATCTGGCTGTTGAATGATTACCGTGGCGTTCCCACTCCTGTTCTGCTGCTGACGTTGCTGTTACTCGGCGGAATGTTTATGGCAACGCGGACGGCATTTGGACGACGCATTTATGCCATCGGCGGCAATCTGGAAGCAGCACGTCTCTCCGGGATTAACGTTGAACGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGACGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTACCGACCTTCTGGCAGTATATCGTTAAAGGTGCGATTCTGTTGCTGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGA", - "dna_sequence_length": 1182, - "functions": [ - "D-xylose ABC transporter permease" - ], - "id": "CDS_3508", - "location": [ - [ - "NC_000913", - 3733720, - "+", - 1182 - ] - ], - "md5": "d27999ce979f472c96091197173cfb50", - "parent_gene": "", - "protein_md5": "4f7ef4f0d7fc188abb5ab29c6fbe5bc0", - "protein_translation": "MSKSNPSEVKLAVPTSGGFSGLKSLNLQVFVMIAAIIAIMLFFTWTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAICDVWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGTTVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQSPASTAVVGRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYAIGGNLEAARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAACVIGGTSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWMDSATKRRS", - "protein_translation_length": 393, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3569" - ], - [ - "gene_synonym", - "EcoGene:EG20253" - ], - [ - "gene_synonym", - "xylR" - ], - [ - "gene_synonym", - "NP_418026.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACI3" - ], - [ - "gene_synonym", - "JW3541" - ], - [ - "gene_synonym", - "ASAP:ABE-0011652" - ], - [ - "gene_synonym", - "GeneID:948086" - ], - [ - "gene_synonym", - "ECK3558" - ], - [ - "gene_synonym", - "GI:16131440" - ] - ], - "dna_sequence": "ATGTTTACTAAACGTCACCGCATCACATTACTGTTCAATGCCAATAAAGCCTATGACCGGCAGGTAGTAGAAGGCGTAGGGGAATATTTACAGGCGTCACAATCGGAATGGGATATTTTCATTGAAGAAGATTTCCGCGCCCGCATTGATAAAATCAAGGACTGGTTAGGAGATGGCGTCATTGCCGACTTCGACGACAAACAGATCGAGCAAGCGCTGGCTGATGTCGACGTCCCCATTGTTGGGGTTGGCGGCTCGTATCACCTTGCAGAAAGTTACCCACCCGTTCATTACATTGCCACCGATAACTATGCGCTGGTTGAAAGCGCATTTTTGCATTTAAAAGAGAAAGGCGTTAACCGCTTTGCTTTTTATGGTCTTCCGGAATCAAGCGGCAAACGTTGGGCCACTGAGCGCGAATATGCATTTCGTCAGCTTGTCGCCGAAGAAAAGTATCGCGGAGTGGTTTATCAGGGGTTAGAAACCGCGCCAGAGAACTGGCAACACGCGCAAAATCGGCTGGCAGACTGGCTACAAACGCTACCACCGCAAACCGGGATTATTGCCGTTACTGACGCCCGAGCGCGGCATATTCTGCAAGTATGTGAACATCTACATATTCCCGTACCGGAAAAATTATGCGTGATTGGCATCGATAACGAAGAACTGACCCGCTATCTGTCGCGTGTCGCCCTTTCTTCGGTCGCTCAGGGCGCGCGGCAAATGGGCTATCAGGCGGCAAAACTGTTGCATCGATTATTAGATAAAGAAGAAATGCCGCTACAGCGAATTTTGGTCCCACCAGTTCGCGTCATTGAACGGCGCTCAACAGATTATCGCTCGCTGACCGATCCCGCCGTTATTCAGGCCATGCATTACATTCGTAATCACGCCTGTAAAGGGATTAAAGTGGATCAGGTACTGGATGCGGTCGGGATCTCGCGCTCCAATCTTGAGAAGCGTTTTAAAGAAGAGGTGGGTGAAACCATCCATGCCATGATTCATGCCGAGAAGCTGGAGAAAGCGCGCAGTCTGCTGATTTCAACCACCTTGTCGATCAATGAGATATCGCAAATGTGCGGTTATCCATCGCTGCAATATTTCTACTCTGTTTTTAAAAAAGCATATGACACGACGCCAAAAGAGTATCGCGATGTAAATAGCGAGGTCATGTTGTAG", - "dna_sequence_length": 1179, - "functions": [ - "xylose divergent operon transcriptional activator" - ], - "id": "CDS_3509", - "location": [ - [ - "NC_000913", - 3734979, - "+", - 1179 - ] - ], - "md5": "f277b80ebe913826887a1015cdfcbaaf", - "parent_gene": "", - "protein_md5": "00a82d6c6e0d7f1ab456ff684a37cabf", - "protein_translation": "MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML", - "protein_translation_length": 392, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3559" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27297" - ], - [ - "gene_synonym", - "b3570" - ], - [ - "gene_synonym", - "YP_026230.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011655" - ], - [ - "gene_synonym", - "bax" - ], - [ - "gene_synonym", - "JW5653" - ], - [ - "gene_synonym", - "GI:49176373" - ], - [ - "gene_synonym", - "GeneID:948089" - ], - [ - "gene_synonym", - "EcoGene:EG11360" - ] - ], - "dna_sequence": "ATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCAAAAGTCCCACTTAACTAAAGCTAGTAATAAACAGGTAAGCAGTAAACAAGAGTATTCTCGCAATAGTGCAAAGAGTAGTTCACTTCCTGATTTGCGAAAATACCCTTCCGGAACACCAAGGAAAAAGGCGTTTCTCCGGACCGTAATGCCTTACATTACCAGCCAAAATGCGGCCATTACTGCGGAACGTAACTGGCTCATTTCAAAACAGTATCAGGGCCAATGGTCACCTGCTGAGCGTGCGCGTCTGAAAGACATCGCCAAACGCTACAAGGTGAAGTGGTCCGGTAATACGCGAAAAATCCCGTGGAATACCTTGCTTGAACGCGTAGACATTATCCCCACCAGTATGGTGGCGACGATGGCTGCAGCAGAAAGCGGTTGGGGAACGTCGAAGCTGGCGCGCAACAACAACAACCTGTTCGGCATGAAATGCATGAAAGGACGTTGTACCAATGCGCCAGGTAAAGTGAAAGGGTACTCACAGTTTAGTTCTGTCAAAGAATCGGTGAGCGCCTATGTCACTAACCTGAATACGCACCCGGCTTACTCTTCGTTCCGTAAATCGCGTGCGCAGCTGCGTAAAGCGGATCAGGAAGTGACTGCCACAGCGATGATTCACAAGCTGAAGGGCTACTCGACCAAAGGGAAGAGTTATAACAACTACCTGTTCGCAATGTACCAGGATAACCAACGGTTAATCGCGGCGCATATGTAA", - "dna_sequence_length": 825, - "functions": [ - "putative glucosaminidase" - ], - "id": "CDS_3510", - "location": [ - [ - "NC_000913", - 3737177, - "-", - 825 - ] - ], - "md5": "eb1f8dc2799f4e1f6b5db0fe06f31926", - "parent_gene": "", - "protein_md5": "569cf1feac98281f8232aeb1a75b1cc6", - "protein_translation": "MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKASNKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITAERNWLISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAAESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPAYSSFRKSRAQLRKADQEVTATAMIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM", - "protein_translation_length": 274, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3560" - ], - [ - "gene_synonym", - "GeneID:948088" - ], - [ - "gene_synonym", - "JW3543" - ], - [ - "gene_synonym", - "malS" - ], - [ - "gene_synonym", - "b3571" - ], - [ - "gene_synonym", - "GI:16131442" - ], - [ - "gene_synonym", - "NP_418028.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25718" - ], - [ - "gene_synonym", - "EcoGene:EG11316" - ], - [ - "gene_synonym", - "ASAP:ABE-0011668" - ] - ], - "dna_sequence": "ATGAAACTCGCCGCCTGTTTTCTGACACTCCTTCCTGGCTTCGCCGTTGCCGCCAGCTGGACTTCTCCGGGGTTTCCCGCCTTTAGCGAACAGGGGACAGGAACATTTGTCAGCCACGCGCAGTTGCCCAAAGGTACGCGTCCACTAACGCTAAATTTTGACCAACAGTGCTGGCAGCCTGCGGATGCGATAAAACTCAATCAGATGCTTTCCCTGCAACCTTGTAGCAACACGCCGCCTCAATGGCGATTGTTCAGGGACGGCGAATATACGCTGCAAATAGACACCCGCTCCGGTACGCCAACATTGATGATTTCCATCCAGAACGCCGCCGAACCGGTAGCAAGCCTGGTCCGTGAATGCCCGAAATGGGATGGATTACCGCTCACAGTGGATGTCAGCGCCACTTTCCCGGAAGGAGCCGCCGTACGGGATTATTACAGCCAGCAAATTGCGATAGTGAAGAACGGTCAAATAATGTTACAACCCGCTGCCACCAGCAACGGTTTACTCCTGCTGGAACGGGCAGAAACTGACACATCCGCCCCTTTCGACTGGCATAACGCCACGGTTTACTTTGTGCTGACAGATCGTTTCGAAAACGGCGATCCCAGTAATGACCAGAGTTACGGACGTCATAAAGACGGTATGGCGGAAATTGGCACTTTTCACGGCGGCGATTTACGCGGCCTGACCAACAAACTGGATTACCTCCAGCAGTTGGGCGTTAATGCTTTATGGATAAGCGCCCCATTTGAGCAAATTCACGGCTGGGTCGGCGGCGGTACAAAAGGCGATTTCCCGCATTATGCCTACCACGGTTATTACACACAGGACTGGACGAATCTTGATGCCAATATGGGCAACGAAGCCGATCTACGGACGCTGGTTGATAGCGCACATCAGCGCGGTATTCGTATTCTCTTTGATGTCGTGATGAACCACACCGGCTATGCCACGCTGGCGGATATGCAGGAGTATCAGTTTGGCGCGTTATATCTTTCTGGTGACGAAGTGAAAAAATCGCTGGGTGAACGCTGGAGCGACTGGAAACCTGCCGCCGGGCAAACCTGGCATAGCTTTAACGATTACATTAATTTCAGCGACAAAACAGGCTGGGATAAATGGTGGGGAAAAAACTGGATCAGAACGGATATCGGCGATTACGACAATCCTGGATTCGACGATCTCACTATGTCGCTAGCCTTTTTGCCGGATATCAAAACCGAATCAACTACCGCTTCTGGTCTGCCGGTGTTCTATAAAAACAAAATGGATACCCACGCCAAAGCCATTGACGGCTATACGCCGCGCGATTACTTAACCCACTGGTTAAGTCAGTGGGTCCGCGACTATGGGATTGATGGTTTTCGGGTCGATACCGCCAAACATGTTGAGTTGCCCGCCTGGCAGCAACTGAAAACCGAAGCCAGCGCCGCGCTTCGCGAATGGAAAAAAGCTAACCCCGACAAAGCATTAGATGACAAACCTTTCTGGATGACCGGTGAAGCCTGGGGCCACGGCGTGATGCAAAGTGACTACTATCGCCACGGCTTCGATGCGATGATCAATTTCGATTATCAGGAGCAGGCGGCGAAAGCAGTCGACTGTCTGGCGCAGATGGATACGACCTGGCAGCAAATGGCGGAGAAATTGCAGGGTTTCAACGTGTTGAGCTACCTCTCGTCGCATGATACCCGCCTGTTCCGTGAAGGGGGCGACAAAGCAGCAGAGTTATTACTATTAGCGCCAGGCGCGGTACAAATCTTTTATGGTGATGAATCCTCGCGTCCGTTCGGTCCTACAGGTTCTGATCCGCTGCAAGGTACACGTTCGGATATGAACTGGCAGGATGTTAGCGGTAAATCTGCCGCCAGCGTCGCGCACTGGCAGAAAATCAGCCAGTTCCGCGCCCGCCATCCCGCAATTGGCGCGGGCAAACAAACGACACTTTTGCTGAAGCAGGGCTACGGCTTTGTTCGTGAGCATGGCGACGATAAAGTGCTGGTCGTCTGGGCAGGGCAACAGTAA", - "dna_sequence_length": 2031, - "functions": [ - "alpha-amylase" - ], - "id": "CDS_3511", - "location": [ - [ - "NC_000913", - 3737497, - "+", - 2031 - ] - ], - "md5": "26bf61f226fd6d477c902503731ae563", - "parent_gene": "", - "protein_md5": "84f8a9ad5a4078cb37492e738061879f", - "protein_translation": "MKLAACFLTLLPGFAVAASWTSPGFPAFSEQGTGTFVSHAQLPKGTRPLTLNFDQQCWQPADAIKLNQMLSLQPCSNTPPQWRLFRDGEYTLQIDTRSGTPTLMISIQNAAEPVASLVRECPKWDGLPLTVDVSATFPEGAAVRDYYSQQIAIVKNGQIMLQPAATSNGLLLLERAETDTSAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMAEIGTFHGGDLRGLTNKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYYTQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYLSGDEVKKSLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNPGFDDLTMSLAFLPDIKTESTTASGLPVFYKNKMDTHAKAIDGYTPRDYLTHWLSQWVRDYGIDGFRVDTAKHVELPAWQQLKTEASAALREWKKANPDKALDDKPFWMTGEAWGHGVMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQMDTTWQQMAEKLQGFNVLSYLSSHDTRLFREGGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSAASVAHWQKISQFRARHPAIGAGKQTTLLLKQGYGFVREHGDDKVLVVWAGQQ", - "protein_translation_length": 676, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "avtA" - ], - [ - "gene_synonym", - "EcoGene:EG10107" - ], - [ - "gene_synonym", - "ECK3561" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09053" - ], - [ - "gene_synonym", - "b3572" - ], - [ - "gene_synonym", - "GeneID:948087" - ], - [ - "gene_synonym", - "YP_026231.1" - ], - [ - "gene_synonym", - "JW5652" - ], - [ - "gene_synonym", - "ASAP:ABE-0011671" - ], - [ - "gene_synonym", - "GI:49176374" - ] - ], - "dna_sequence": "ATGACATTCTCCCTTTTTGGTGACAAATTTACCCGCCACTCCGGCATTACGCTGTTGATGGAAGATCTGAACGACGGTTTACGCACGCCTGGCGCGATTATGCTCGGCGGCGGTAATCCGGCGCAGATCCCGGAAATGCAGGACTACTTCCAGACGCTACTGACCGACATGCTGGAAAGTGGCAAAGCGACTGATGCACTGTGTAACTACGACGGTCCACAGGGGAAAACGGAGCTACTCACACTGCTTGCCGGAATGCTGCGCGAGAAGTTGGGTTGGGATATCGAACCACAGAATATTGCACTAACAAACGGCAGCCAGAGCGCGTTTTTCTACTTATTTAACCTGTTTGCCGGACGCCGTGCCGATGGTCGGGTCAAAAAAGTGCTGTTCCCGCTTGCACCGGAATACATTGGCTATGCTGACGCCGGACTGGAAGAAGATCTGTTTGTCTCTGCGCGTCCGAATATTGAACTGCTGCCGGAAGGCCAGTTTAAATACCACGTCGATTTTGAGCATCTGCATATTGGCGAAGAAACCGGGATGATTTGCGTCTCCCGGCCGACGAATCCAACAGGCAATGTGATTACTGACGAAGAGTTGCTGAAGCTTGACGCGCTGGCGAATCAACACGGCATTCCGCTGGTGATTGATAACGCTTATGGCGTCCCGTTCCCGGGTATCATCTTCAGTGAAGCGCGCCCGCTATGGAATCCGAATATCGTGCTGTGCATGAGTCTTTCCAAGCTGGGTCTACCTGGCTCCCGCTGCGGCATTATCATCGCCAATGAAAAAATCATCACCGCCATCACCAATATGAACGGCATTATCAGCCTGGCACCTGGCGGTATTGGTCCGGCGATGATGTGTGAAATGATTAAGCGTAACGATCTGCTGCGCCTGTCTGAAACAGTCATCAAACCGTTTTACTACCAGCGTGTTCAGGAAACTATCGCCATCATTCGCCGCTATTTACCGGAAAATCGCTGCCTGATTCATAAACCGGAAGGAGCCATTTTCCTCTGGCTATGGTTTAAGGATTTGCCCATTACGACCAAGCAGCTCTATCAGCGCCTGAAAGCACGCGGCGTGCTGATGGTGCCGGGGCACAACTTCTTCCCAGGGCTGGATAAACCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAGAAAGAGCCTGGGCTGAAAGTCACTAA", - "dna_sequence_length": 1254, - "functions": [ - "valine-pyruvate aminotransferase", - "transaminase C", - "alanine-valine transaminase" - ], - "id": "CDS_3512", - "location": [ - [ - "NC_000913", - 3739705, - "+", - 1254 - ] - ], - "md5": "d24444dd3832da79fd12084d1961f08e", - "parent_gene": "", - "protein_md5": "c95811e8027558cca647df885ac11204", - "protein_translation": "MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIPEMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGIISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHKPEGAIFLWLWFKDLPITTKQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYVPEPEKIEAGVKILAEEIERAWAESH", - "protein_translation_length": 417, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3562" - ], - [ - "gene_synonym", - "NP_418030.1" - ], - [ - "gene_synonym", - "JW3545" - ], - [ - "gene_synonym", - "b3573" - ], - [ - "gene_synonym", - "GeneID:948085" - ], - [ - "gene_synonym", - "GI:16131444" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P56256" - ], - [ - "gene_synonym", - "ASAP:ABE-0011674" - ], - [ - "gene_synonym", - "ysaA" - ], - [ - "gene_synonym", - "EcoGene:EG14319" - ] - ], - "dna_sequence": "ATGAACCGGTTTATTATTGCGGATGCGACGAAATGTATCGGTTGCCGTACCTGTGAAGTGGCTTGCGCAGTGTCGCATCATGAGAATCAGGATTGCGCTGCGTTGTCACCAGACGAGTTTATTTCCCGTATTCGTGTCATTAAAGACCACTGCTGGACCACGGCAGTAGCCTGTCATCAGTGTGAAGATGCACCGTGCGCGAATGTCTGCCCTGTTGACGCGATAAGCCGCGAACATGGGCATATTTTCGTTGAACAAACACGTTGCATTGGCTGTAAAAGCTGTATGCTGGCTTGCCCGTTTGGTGCGATGGAGGTCGTTTCTTCGCGCAAAAAGGCGAGGGCGATTAAGTGCGATCTGTGCTGGCATCGGGAGACGGGACCGGCCTGTGTTGAAGCCTGCCCGACAAAGGCGTTGCAGTGCATGGATGTCGAGAAAGTGCAGCGGCATCGGCTACGGCAGCAGCCTGTTTGA", - "dna_sequence_length": 474, - "functions": [ - "putative hydrogenase, 4Fe-4S ferredoxin-type component" - ], - "id": "CDS_3513", - "location": [ - [ - "NC_000913", - 3741582, - "-", - 474 - ] - ], - "md5": "1fbdc7f3514979748fe30dfa7be36be8", - "parent_gene": "", - "protein_md5": "b21a15f1751161e95d1823853b8ce530", - "protein_translation": "MNRFIIADATKCIGCRTCEVACAVSHHENQDCAALSPDEFISRIRVIKDHCWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFGAMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV", - "protein_translation_length": 157, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3563" - ], - [ - "gene_synonym", - "JW3546" - ], - [ - "gene_synonym", - "b3574" - ], - [ - "gene_synonym", - "NP_418031.1" - ], - [ - "gene_synonym", - "GeneID:948084" - ], - [ - "gene_synonym", - "EcoGene:EG12278" - ], - [ - "gene_synonym", - "GI:16131445" - ], - [ - "gene_synonym", - "yiaJ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37671" - ], - [ - "gene_synonym", - "ASAP:ABE-0011677" - ] - ], - "dna_sequence": "ATGGGGAAAGAAGTGATGGGAAAAAAAGAGAACGAGATGGCGCAGGAAAAAGAGCGTCCAGCCGGAAGCCAGAGTCTGTTTCGCGGGTTGATGCTGATTGAGATTTTGAGCAACTATCCAAACGGTTGTCCGTTGGCGCATCTTTCGGAGCTGGCTGGTTTAAATAAGAGTACCGTCCATCGCTTATTGCAGGGATTACAGTCCTGCGGCTATGTGACCACCGCGCCTGCCGCAGGGAGTTATCGCCTGACCACCAAATTTATTGCCGTCGGGCAGAAGGCGCTGTCTTCGCTGAATATCATTCATATCGCCGCTCCGCATCTTGAGGCACTGAACATCGCCACTGGTGAAACCATTAACTTCTCCAGCCGCGAAGACGATCACGCTATTTTGATTTATAAGCTGGAACCCACAACCGGGATGCTGCGAACCCGTGCCTATATTGGCCAGCATATGCCGCTCTACTGTTCCGCAATGGGCAAGATCTACATGGCGTTTGGTCACCCGGACTACGTGAAGTCATACTGGGAAAGCCATCAGCATGAGATCCAGCCGTTAACCCGCAATACCATTACCGAGCTGCCCGCGATGTTCGACGAACTGGCGCACATTCGTGAAAGCGGAGCGGCGATGGACAGAGAAGAAAACGAACTCGGCGTCTCCTGTATTGCTGTTCCGGTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCACTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAA", - "dna_sequence_length": 849, - "functions": [ - "transcriptional repressor for the yiaKLMNO-lyxK-sgbHUE operon" - ], - "id": "CDS_3514", - "location": [ - [ - "NC_000913", - 3742532, - "-", - 849 - ] - ], - "md5": "fddfcea9ac375994749a057c4305430d", - "parent_gene": "", - "protein_md5": "4f8e22a41df9a885a8f3de9ccf4c4266", - "protein_translation": "MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCPLAHLSELAGLNKSTVHRLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIHIAAPHLEALNIATGETINFSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMGKIYMAFGHPDYVKSYWESHQHEIQPLTRNTITELPAMFDELAHIRESGAAMDREENELGVSCIAVPVFDIHGRVPYAVSISLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRDDLGAIT", - "protein_translation_length": 282, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3564" - ], - [ - "gene_synonym", - "JW3547" - ], - [ - "gene_synonym", - "b3575" - ], - [ - "gene_synonym", - "EcoGene:EG12279" - ], - [ - "gene_synonym", - "GI:16131446" - ], - [ - "gene_synonym", - "ASAP:ABE-0011682" - ], - [ - "gene_synonym", - "yiaK" - ], - [ - "gene_synonym", - "NP_418032.1" - ], - [ - "gene_synonym", - "GeneID:948096" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37672" - ] - ], - "dna_sequence": "ATGAAAGTGACATTTGAGCAGTTAAAAGCAGCCTTTAATCGGGTCTTAATTTCACGCGGCGTTGACAGCGAAACGGCTGACGCCTGTGCAGAGATGTTCGCCCGCACCACCGAATCCGGCGTTTATTCTCACGGCGTTAATCGTTTCCCTCGTTTCATTCAACAACTGGAAAACGGCGATATCATTCCTGATGCCCAACCCAAACGTATAACCAGCCTCGGCGCAATTGAACAGTGGGACGCCCAGCGTTCGATCGGTAACCTGACAGCGAAAAAGATGATGGATCGCGCCATTGAACTGGCTGCCGATCACGGTATTGGTCTGGTGGCACTACGTAATGCCAACCACTGGATGCGCGGCGGCAGCTACGGCTGGCAGGCGGCGGAAAAAGGCTATATTGGCATTTGCTGGACCAACTCCATCGCCGTAATGCCGCCGTGGGGCGCAAAAGAGTGTCGCATAGGCACTAACCCGCTGATCGTCGCCATTCCTTCCACGCCGATCACCATGGTCGATATGTCGATGTCGATGTTCTCTTACGGCATGTTAGAAGTTAACCGTCTGGCAGGTCGTCAGCTCCCGGTCGATGGTGGCTTTGATGATGAGGGCAATTTGACCAAAGAACCTGGCGTTATCGAGAAGAATCGCCGCATTTTGCCGATGGGCTACTGGAAAGGTTCTGGCATGTCGATTGTGCTGGATATGATCGCTACTCTCCTTTCCGACGGCGCATCCGTTGCCGAAGTCACCCAGGACAACAGCGACGAATACGGCATTTCACAAATTTTTATTGCCATTGAAGTGGACAAGCTTATCGACGGTCCCACCCGCGATGCCAAGCTGCAACGCATCATGGATTACGTTACTAGTGCCGAGCGTGCTGACGAAAATCAGGCCATTCGCTTACCCGGCCATGAATTTACTACCCTGCTGGCCGAAAACCGCCGTAACGGCATCACTGTTGATGACAGCGTGTGGGCCAAAATCCAGGCGTTATGA", - "dna_sequence_length": 999, - "functions": [ - "2,3-diketo-L-gulonate reductase, NADH-dependent" - ], - "id": "CDS_3515", - "location": [ - [ - "NC_000913", - 3742733, - "+", - 999 - ] - ], - "md5": "b431dc2448215997052835f03620e818", - "parent_gene": "", - "protein_md5": "370d94848809cf71d304db4e5a11c8b3", - "protein_translation": "MKVTFEQLKAAFNRVLISRGVDSETADACAEMFARTTESGVYSHGVNRFPRFIQQLENGDIIPDAQPKRITSLGAIEQWDAQRSIGNLTAKKMMDRAIELAADHGIGLVALRNANHWMRGGSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLIVAIPSTPITMVDMSMSMFSYGMLEVNRLAGRQLPVDGGFDDEGNLTKEPGVIEKNRRILPMGYWKGSGMSIVLDMIATLLSDGASVAEVTQDNSDEYGISQIFIAIEVDKLIDGPTRDAKLQRIMDYVTSAERADENQAIRLPGHEFTTLLAENRRNGITVDDSVWAKIQAL", - "protein_translation_length": 332, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011684" - ], - [ - "gene_synonym", - "ECK3565" - ], - [ - "gene_synonym", - "JW3548" - ], - [ - "gene_synonym", - "b3576" - ], - [ - "gene_synonym", - "GI:16131447" - ], - [ - "gene_synonym", - "EcoGene:EG12280" - ], - [ - "gene_synonym", - "GeneID:948094" - ], - [ - "gene_synonym", - "yiaL" - ], - [ - "gene_synonym", - "NP_418033.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37673" - ] - ], - "dna_sequence": "ATGATTTTTGGACATATCGCGCAGCCCAATCCGTGCCGTTTGCCCGCCGCCATTGAAAAGGCGCTCGATTTTCTGCGCGCTACCGATTTCAACGCCCTGGAGCCGGGCGTTGTCGAAATCGACGGCAAAAATATTTATACGCAAATTATCGATTTAACCACACGCGAAGCGGTGGTAAACCGTCCGGAAGTGCATCGTCGGTATATCGATATTCAGTTTCTGGCGTGGGGCGAAGAGAAAATCGGCATTGCTATTGATACGGGAAATAATAAAGTCAGCGAATCACTATTAGAGCAGCGCAATATTATTTTTTATCACGACAGTGAACATGAATCATTTATAGAAATGATACCGGGCAGCTACGCAATTTTCTTTCCGCAGGATGTTCACCGACCAGGTTGTATTATGCAAACAGCCTCTGAGATACGAAAAATTGTGGTTAAAGTCGCATTAACGGCGCTGAATTAA", - "dna_sequence_length": 468, - "functions": [ - "DUF386 family protein" - ], - "id": "CDS_3516", - "location": [ - [ - "NC_000913", - 3743743, - "+", - 468 - ] - ], - "md5": "507fb93bff125ddf80cad7666c806c7a", - "parent_gene": "", - "protein_md5": "da354cf16538711e0089dc72b6ab149d", - "protein_translation": "MIFGHIAQPNPCRLPAAIEKALDFLRATDFNALEPGVVEIDGKNIYTQIIDLTTREAVVNRPEVHRRYIDIQFLAWGEEKIGIAIDTGNNKVSESLLEQRNIIFYHDSEHESFIEMIPGSYAIFFPQDVHRPGCIMQTASEIRKIVVKVALTALN", - "protein_translation_length": 155, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3566" - ], - [ - "gene_synonym", - "JW3549" - ], - [ - "gene_synonym", - "b3577" - ], - [ - "gene_synonym", - "NP_418034.1" - ], - [ - "gene_synonym", - "GeneID:948093" - ], - [ - "gene_synonym", - "ASAP:ABE-0011690" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37674" - ], - [ - "gene_synonym", - "EcoGene:EG12281" - ], - [ - "gene_synonym", - "yiaM" - ], - [ - "gene_synonym", - "GI:16131448" - ] - ], - "dna_sequence": "ATGAAAAAAATACTCGAAGCAATACTGGCGATTAATCTCGCCGTACTTTCCTGTATTGTATTTATAAACATTATTTTAAGATATGGTTTTCAGACAAGCATTTTATCTGTTGATGAATTGTCACGTTATTTATTTGTCTGGTTAACGTTTATTGGCGCGATTGTAGCTTTTATGGATAACGCCCACGTTCAGGTCACCTTTCTGGTGGAGAAACTCTCCCCCGCATGGCAGCGACGAGTCGCTCTGGTTACCCATTCCTTAATCTTATTTATTTGTGGCGCACTGGCCTGGGGCGCAACGCTAAAAACAATTCAGGACTGGAGCGATTATTCACCGATCCTCGGTTTACCCATCGGCCTGATGTATGCCGCTTGTCTGCCCACCAGCCTCGTTATCGCATTCTTTGAACTGCGTCATTTATATCAACTCATCACGCGTAGCAATTCTCTAACGTCGCCACCGCAAGGAGCTTAA", - "dna_sequence_length": 474, - "functions": [ - "2,3-diketo-L-gulonate TRAP transporter small permease protein" - ], - "id": "CDS_3517", - "location": [ - [ - "NC_000913", - 3744328, - "+", - 474 - ] - ], - "md5": "e31c4bfb5a3f53a03b6ef4e92f4a3f7d", - "parent_gene": "", - "protein_md5": "01f108b0405c572f66ecda6a8d48c448", - "protein_translation": "MKKILEAILAINLAVLSCIVFINIILRYGFQTSILSVDELSRYLFVWLTFIGAIVAFMDNAHVQVTFLVEKLSPAWQRRVALVTHSLILFICGALAWGATLKTIQDWSDYSPILGLPIGLMYAACLPTSLVIAFFELRHLYQLITRSNSLTSPPQGA", - "protein_translation_length": 157, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3567" - ], - [ - "gene_synonym", - "YP_026232.1" - ], - [ - "gene_synonym", - "b3578" - ], - [ - "gene_synonym", - "JW5651" - ], - [ - "gene_synonym", - "ASAP:ABE-0011692" - ], - [ - "gene_synonym", - "GeneID:948092" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37675" - ], - [ - "gene_synonym", - "EcoGene:EG12282" - ], - [ - "gene_synonym", - "GI:49176375" - ], - [ - "gene_synonym", - "yiaN" - ] - ], - "dna_sequence": "ATGGCTGTGCTGATTTTTCTGGGCTGTCTGTTGGGTGGTATTGCTATCGGTTTGCCTATTGCCTGGGCACTGTTGTTGTGCGGGGCGGCGTTAATGTTCTGGCTGGACATGTTTGATGTCCAGATCATGGCACAAACGCTGGTGAACGGAGCCGATAGCTTCTCCCTGCTGGCGATTCCGTTCTTTGTGCTGGCGGGTGAAATCATGAATGCGGGCGGCTTGTCAAAACGCATTGTTGACCTGCCGATGAAACTGGTGGGGCATAAACCAGGCGGGCTGGGCTACGTCGGCGTGCTGGCAGCTATGATTATGGCGAGCCTTTCTGGTTCTGCCGTTGCGGATACCGCCGCCGTTGCCGCTCTACTGGTGCCGATGATGCGCAGCGCCAACTATCCGGTCAACCGGGCGGCGGGGCTGATTGCCTCTGGCGGCATTATCGCGCCAATTATTCCCCCTTCCATTCCGTTTATTATCTTCGGCGTTTCCAGCGGATTATCCATCAGTAAGCTGTTTATGGCGGGCATTGCCCCTGGCATGATGATGGGCGCAACGCTGATGCTTACCTGGTGGTGGCAGGCCAGTCGCCTTAATTTACCCCGCCAGCAAAAAGCAACGATGCAGGAAATCTGGCACTCTTTTGTCTCCGGTATCTGGGCGCTGTTTCTTCCAGTCATCATTATTGGCGGGTTTCGCTCCGGCCTGTTTACCCCTACCGAAGCCGGGGCCGTTGCTGCTTTCTATGCGCTGTTTGTCGCCACAGTTATTTACCGTGAAATGACCTTCGCCACACTTTGGCATGTACTCATTGGCGCGGCGAAAACCACCTCAGTGGTTATGTTTCTGGTGGCCTCGGCACAAGTTTCCGCCTGGCTGATTACCATTGCTGAACTGCCGATGATGGTTTCTGATTTACTGCAACCGTTGGTCGATTCACCGCGTCTGCTGTTTATCGTCATTATGGTGGCTATCCTGATTGTCGGCATGGTCATGGATTTAACGCCGACGGTATTAATTCTTACCCCGGTATTAATGCCTTTAGTTAAAGAGGCAGGAATCGATCCGATTTATTTCGGTGTCATGTTTATCATTAACTGCTCAATCGGCTTAATTACACCGCCTATCGGTAATGTACTTAACGTTATTTCAGGGGTGGCAAAACTCAAATTCGATGATGCAGTCAGAGGCGTTTTCCCTTACGTCCTGGTTTTATATTCATTATTAGTCGTATTTGTTTTTATTCCCGATCTCATCATCCTCCCTTTGAAATGGATTAATTAA", 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"ASAP:ABE-0011694" - ], - [ - "gene_synonym", - "GI:16131450" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37676" - ], - [ - "gene_synonym", - "EcoGene:EG12283" - ], - [ - "gene_synonym", - "GeneID:948091" - ], - [ - "gene_synonym", - "yiaO" - ], - [ - "gene_synonym", - "NP_418036.1" - ] - ], - "dna_sequence": "ATGAAATTACGCTCTGTAACCTACGCATTATTCATTGCTGGCCTGGCTGCATTCAGCACATCTTCTCTGGCGGCACAATCTTTACGTTTCGGTTATGAAACATCACAAACCGACTCGCAACATATTGCGGCGAAAAAATTCAATGATTTATTGCAGGAGAGAACCAAAGGCGAGCTGAAATTAAAACTGTTCCCGGACAGCACTCTCGGTAACGCGCAGGCGATGATCAGCGGCGTACGTGGCGGCACCATCGATATGGAAATGTCCGGCTCGAATAACTTTGCCGGGTTATCACCAGTGATGAACTTGCTTGATGTCCCTTTCCTGTTCCGCGATACCGCTCACGCGCATAAAACGCTCGACGGCAAAGTCGGTGATGATCTGAAAGCCTCACTTGAAGGTAAAGGACTGAAAGTACTGGCCTACTGGGAAAACGGCTGGCGCGATGTCACCAACTCGCGCGCACCGGTTAAAACCCCCGCCGACCTGAAAGGGCTGAAAATCCGCACCAACAATAGCCCGATGAATATCGCCGCATTCAAAGTCTTTGGCGCTAACCCGATCCCGATGCCGTTTGCCGAAGTCTATACCGGGCTGGAAACCCGCACTATCGACGCTCAGGAACACCCGATCAACGTCGTCTGGTCAGCAAAATTTTTCGAAGTGCAGAAGTTCCTTTCTCTGACGCACCACGCCTATTCCCCGCTTCTGGTGGTGATCAACAAAGCGAAGTTTGATGGCTTAAGTCCGGAGTTCCAGCAGGCGCTAGTTTCATCTGCACAAGAAGCGGGTAACTATCAGCGCAAACTGGTTGCTGAAGATCAGCAAAAAATCATCGACGGCATGAAAGAAGCGGGCGTGGAAGTCATCACCGATCTCGACCGCAAAGCCTTTAGCGACGCACTGGGGAATCAGGTTCGCGACATGTTTGTTAAAGATGTGCCGCAGGGAGCTGATCTGCTGAAAGCCGTGGATGAGGTGCAATAA", - "dna_sequence_length": 987, - "functions": [ - "2,3-diketo-L-gulonate-binding periplasmic protein" - ], - "id": "CDS_3519", - "location": [ - [ - "NC_000913", - 3746094, - "+", - 987 - ] - ], - "md5": "cf6efb40bc65ef05025eb5941c29f405", - "parent_gene": "", - "protein_md5": "1f5d91a0d4e75949debe411584efbf38", - "protein_translation": "MKLRSVTYALFIAGLAAFSTSSLAAQSLRFGYETSQTDSQHIAAKKFNDLLQERTKGELKLKLFPDSTLGNAQAMISGVRGGTIDMEMSGSNNFAGLSPVMNLLDVPFLFRDTAHAHKTLDGKVGDDLKASLEGKGLKVLAYWENGWRDVTNSRAPVKTPADLKGLKIRTNNSPMNIAAFKVFGANPIPMPFAEVYTGLETRTIDAQEHPINVVWSAKFFEVQKFLSLTHHAYSPLLVVINKAKFDGLSPEFQQALVSSAQEAGNYQRKLVAEDQQKIIDGMKEAGVEVITDLDRKAFSDALGNQVRDMFVKDVPQGADLLKAVDEVQ", - "protein_translation_length": 328, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yiaP" - ], - [ - "gene_synonym", - "lyxK" - ], - [ - "gene_synonym", - "GeneID:948101" - ], - [ - "gene_synonym", - "b3580" - ], - [ - "gene_synonym", - "lyx" - ], - [ - "gene_synonym", - "JW3552" - ], - [ - "gene_synonym", - "ECK3569" - ], - [ - "gene_synonym", - "ASAP:ABE-0011696" - ], - [ - "gene_synonym", - "xylK" - ], - [ - "gene_synonym", - "GI:16131451" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37677" - ], - [ - "gene_synonym", - "EcoGene:EG12284" - ], - [ - "gene_synonym", - "NP_418037.1" - ] - ], - "dna_sequence": "ATGACGCAATACTGGCTGGGGTTAGATTGTGGCGGTAGCTGGCTGAAAGCCGGGCTGTATGACCGCGAAGGCCGGGAGGCAGGCGTGCAGCGCCTGCCGCTGTGCGCATTAAGCCCGCAGCCAGGCTGGGCAGAGCGCGATATGGCAGAACTGTGGCAATGCTGCATGGCTGTCATTCGCGCCCTGCTTACTCATTCTGGTGTTAGCGGGGAACAAATTGTCGGTATCGGCATCTCCGCACAGGGAAAGGGCTTGTTTTTGCTGGATAAAAACGACAAACCGCTCGGGAATGCTATTTTGTCCTCGGACCGCCGGGCGATGGAAATCGTTCGTCGCTGGCAGGAAGATGGCATCCCGGAAAAACTCTACCCGCTGACCCGACAAACCTTGTGGACCGGGCATCCGGTGTCGCTGTTACGCTGGCTGAAAGAGCACGAACCAGAACGCTACGCGCAAATTGGCTGCGTGATGATGACGCACGACTACCTGCGCTGGTGTTTAACTGGCGTCAAAGGCTGTGAAGAGAGCAATATTTCCGAGTCCAACCTCTACAACATGAGTCTTGGGGAATATGACCCGTGCCTCACCGACTGGCTGGGGATCGCTGAAATCAATCACGCCCTGCCGCCTGTTGTCGGATCTGCCGAAATCTGCGGGGAGATCACCGCTCAGACAGCCGCCCTGACCGGTCTGAAAGCGGGTACGCCCGTTGTTGGCGGCCTGTTTGATGTGGTTTCCACCGCACTCTGCGCCGGGATCGAAGACGAATTTACCCTCAATGCGGTGATGGGGACCTGGGCGGTGACCAGCGGCATAACCCGCGGTTTACGTGACGGTGAAGCGCATCCGTATGTCTATGGTCGCTACGTTAACGATGGTGAATTTATCGTTCACGAAGCCAGCCCTACCTCTTCCGGCAACCTCGAATGGTTTACCGCACAGTGGGGAGAAATCTCGTTTGATGAGATCAATCAGGCCGTTGCCAGCTTGCCGAAGGCTGGGGGCGATCTCTTTTTCCTGCCGTTCCTGTACGGCAGCAACGCCGGACTCGAGATGACCAGTGGTTTCTACGGGATGCAGGCCATTCACACCCGCGCGCACCTGTTGCAGGCCATCTATGAAGGGGTGGTGTTCAGCCATATGACCCACCTCAACCGAATGCGCGAACGTTTTACTGATGTTCACACCCTACGCGTCACTGGCGGCCCGGCGCACTCCGATGTCTGGATGCAAATGCTGGCGGACGTCAGCGGTCTGCGTATCGAGCTGCCGCAGGTGGAAGAAACCGGCTGCTTTGGTGCGGCCCTTGCCGCCCGCGTCGGCACCGGGGTTTATCACAACTTCAGCGAAGCCCAACGTGACTTGCGACACCCGGTGCGCACCCTGCTGCCAGATATGACCGCCCATCAGCTTTACCAAAAAAAATATCAACGTTATCAGCATCTCATTGCCGCACTTCAGGGCTTTCACGCCCGCATTAAGGAGCACACATTATGA", 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- "gene_synonym", - "b3581" - ], - [ - "gene_synonym", - "NP_418038.1" - ], - [ - "gene_synonym", - "GeneID:948098" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37678" - ], - [ - "gene_synonym", - "GI:16131452" - ], - [ - "gene_synonym", - "ECK3570" - ], - [ - "gene_synonym", - "EcoGene:EG12285" - ], - [ - "gene_synonym", - "ASAP:ABE-0011698" - ] - ], - "dna_sequence": "ATGAGCCGACCACTTCTGCAACTGGCCCTCGACCACTCATCACTTGAAGCCGCGCAGCGCGACGTGACGCTGTTAAAAGACAGCGTCGATATCGTCGAAGCGGGCACCATTCTCTGTTTAAACGAAGGGCTTGGCGCGGTGAAAGCCTTGCGCGAACAGTGCCCGGACAAAATCATCGTTGCTGACTGGAAGGTCGCCGACGCTGGTGAAACGCTCGCGCAACAGGCGTTTGGCGCAGGCGCTAACTGGATGACCATCATCTGCGCCGCGCCGCTCGCGACGGTAGAAAAAGGCCACGCAATGGCACAACGCTGCGGGGGTGAAATTCAGATAGAGCTGTTCGGTAACTGGACGCTGGACGACGCCCGCGACTGGCATCGTATTGGCGTGCGGCAGGCCATTTATCATCGCGGTCGTGATGCACAGGCCAGCGGGCAACAGTGGGGCGAAGCCGATCTGGCACGCATGAAGGCGCTTTCAGATATCGGCCTTGAGCTTTCCATTACTGGCGGGATTACCCCTGCTGACCTGCCGCTGTTTAAAGATATCCGCGTGAAAGCGTTTATTGCCGGGCGGGCACTGGCAGGCGCGGCAAATCCGGCGCAAGTGGCTGGCGATTTCCATGCGCAAATCGACGCTATCTGGGGAGGTGCGCGTGCGTAA", - "dna_sequence_length": 663, - "functions": [ - "3-keto-L-gulonate 6-phosphate decarboxylase" - ], - "id": "CDS_3521", - "location": [ - [ - "NC_000913", - 3748577, - "+", - 663 - ] - ], - "md5": "066187abf791e3f002b9f17b7fbae4f3", - "parent_gene": "", - "protein_md5": "72dd56e2135778c01fe4d8bf7d090575", - "protein_translation": "MSRPLLQLALDHSSLEAAQRDVTLLKDSVDIVEAGTILCLNEGLGAVKALREQCPDKIIVADWKVADAGETLAQQAFGAGANWMTIICAAPLATVEKGHAMAQRCGGEIQIELFGNWTLDDARDWHRIGVRQAIYHRGRDAQASGQQWGEADLARMKALSDIGLELSITGGITPADLPLFKDIRVKAFIAGRALAGAANPAQVAGDFHAQIDAIWGGARA", - "protein_translation_length": 220, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yiaR" - ], - [ - "gene_synonym", - "b3582" - ], - [ - "gene_synonym", - "GeneID:948100" - ], - [ - "gene_synonym", - "JW5650" - ], - [ - "gene_synonym", - "GI:90111618" - ], - [ - "gene_synonym", - "NP_418039.2" - ], - [ - "gene_synonym", - "ECK3571" - ], - [ - "gene_synonym", - "sgbU" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37679" - ], - [ - "gene_synonym", - "EcoGene:EG12286" - ], - [ - "gene_synonym", - "ASAP:ABE-0011700" - ] - ], - "dna_sequence": "GTGCGTAATCATCAGTTAGGGATTTATGAAAAAGCGCTGGCGAAAGATCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGCGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACGAACGGCTCTCACGTCTTGACTGGAGCGCCGCACAAAGGACTTCGCTGGTTGCCGCGATGATCGAAACAGGTGTTGGGATCCCGTCGATGTGCCTGTCCGCACATCGTCGCTTTCCCTTTGGTAGCCGTGACGAGGCAGTGCGCGAACGGGCGCGGGAAATCATGAGTAAAGCGATTCGCCTGGCGCGCGATCTCGGCATTCGCACCATCCAGCTGGCAGGTTATGACGTCTATTACGAAGACCACGACGAAGGCACCCGGCAACGTTTTGCTGAAGGGCTGGCGTGGGCAGTCGAACAGGCGGCGGCATCACAAGTAATGCTGGCGGTGGAGATTATGGATACCGCGTTTATGAACTCCATCAGCAAATGGAAAAAATGGGACGAGATGCTCGCCTCACCGTGGTTCACCGTCTACCCGGACGTCGGCAACCTCAGCGCCTGGGGCAATGATGTTCCCGCCGAACTGAAACTGGGCATTGACCGTATCGCCGCGATCCACCTGAAAGACACCCAGCCAGTCACCGGGCAAAGTCCCGGACAGTTCCGCGACGTGCCGTTTGGCGAAGGCTGCGTCGATTTCGTTGGCATCTTCAAAACGCTGCATAAACTGAACTATCGCGGTTCTTTCCTGATTGAGATGTGGACCGAAAAAGCCAAAGAGCCGGTGCTGGAGATTATTCAGGCGCGGCGTTGGATTGAAGCGCGTATGCAGGAGGCTGGATTTATATGTTAG", - "dna_sequence_length": 861, - "functions": [ - "putative L-xylulose 5-phosphate 3-epimerase" - ], - "id": "CDS_3522", - "location": [ - [ - "NC_000913", - 3749232, - "+", - 861 - ] - ], - "md5": "931588070e60a169ddc784c5dbcaefe6", - "parent_gene": "", - "protein_md5": "1964d352085c4e5813b05f1c3c40e387", - "protein_translation": "MRNHQLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRTSLVAAMIETGVGIPSMCLSAHRRFPFGSRDEAVRERAREIMSKAIRLARDLGIRTIQLAGYDVYYEDHDEGTRQRFAEGLAWAVEQAAASQVMLAVEIMDTAFMNSISKWKKWDEMLASPWFTVYPDVGNLSAWGNDVPAELKLGIDRIAAIHLKDTQPVTGQSPGQFRDVPFGEGCVDFVGIFKTLHKLNYRGSFLIEMWTEKAKEPVLEIIQARRWIEARMQEAGFIC", - "protein_translation_length": 286, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131454" - ], - [ - "gene_synonym", - "yiaS" - ], - [ - "gene_synonym", - "b3583" - ], - [ - "gene_synonym", - "JW3555" - ], - [ - "gene_synonym", - "ASAP:ABE-0011702" - ], - [ - "gene_synonym", - "sgbE" - ], - [ - "gene_synonym", - "NP_418040.1" - ], - [ - "gene_synonym", - "GeneID:948099" - ], - [ - "gene_synonym", - "ECK3572" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37680" - ], - [ - "gene_synonym", - "EcoGene:EG12287" - ] - ], - "dna_sequence": "ATGTTAGAGCAACTGAAAGCCGACGTGCTGGCGGCGAATCTGGCGCTTCCCGCTCACCATCTGGTGACGTTCACCTGGGGCAATGTCAGCGCGGTAGACGAAACGCGGCAATGGATGGTAATCAAACCTTCCGGCGTCGAGTACGACGTGATGACCGCCGACGATATGGTGGTGGTTGAGATAGCCAGCGGTAAGGTGGTGGAAGGCAGCAAAAAACCCTCTTCCGATACACCAACGCATCTGGCGCTCTACCGTCGCTATGCCGAAATTGGCGGTATTGTGCATACCCACTCGCGCCACGCCACCATCTGGTCACAGGCCGGGCTGGATCTCCCCGCCTGGGGCACCACCCACGCCGATTATTTTTACGGTGCCATCCCCTGCACGCGACAGATGACCGCAGAGGAGATTAACGGCGAATATGAATATCAGACCGGCGAAGTGATCATTGAAACCTTCGAAGAACGTGGCAGGAGTCCGGCACAAATCCCGGCGGTGCTGGTGCATTCTCACGGCCCGTTCGCATGGGGTAAAAACGCCGCCGATGCCGTGCATAACGCCGTAGTACTCGAAGAATGCGCCTATATGGGTCTATTCTCGCGCCAGCTTGCGCCGCAGCTCCCTGCGATGCAAAACGAACTGCTGGATAAGCACTACCTGCGTAAGCATGGGGCCAATGCCTATTACGGGCAGTAA", - "dna_sequence_length": 696, - "functions": [ - "L-ribulose-5-phosphate 4-epimerase" - ], - "id": "CDS_3523", - "location": [ - [ - "NC_000913", - 3750086, - "+", - 696 - ] - ], - "md5": "d7ca35c01cb5384601780326e0222500", - "parent_gene": "", - "protein_md5": "b5032ec5df07d240b23ec00a06d7d92f", - "protein_translation": "MLEQLKADVLAANLALPAHHLVTFTWGNVSAVDETRQWMVIKPSGVEYDVMTADDMVVVEIASGKVVEGSKKPSSDTPTHLALYRRYAEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGAIPCTRQMTAEEINGEYEYQTGEVIIETFEERGRSPAQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELLDKHYLRKHGANAYYGQ", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4648" - ], - [ - "gene_synonym", - "EcoGene:EG14455" - ], - [ - "gene_synonym", - "ysaC" - ], - [ - "gene_synonym", - "GeneID:5625574" - ], - [ - "gene_synonym", - "ECK4459" - ] - ], - "dna_sequence": "TTTAATGACGTTGGCTATTTCCGGCAGATTTTTCAGAAACATACTGGTTTAACGCCAGCAGCGTGGAAGCGGCGTTACAGCAAGGAACATATCAATTCGTAG", - "dna_sequence_length": 102, - "id": "CDS_3524", - "location": [ - [ - "NC_000913", - 3750914, - "-", - 102 - ] - ], - "md5": "273631981ae5f42d51a3648087f4230b", - "parent_gene": "", - "protein_md5": "d162917896972fa1b1b9127b68113a89", - "protein_translation": "FNDVGYFRQIFQKHTGLTPAAWKRRYSKEHINS", - "protein_translation_length": 33, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4649" - ], - [ - "gene_synonym", - "EcoGene:EG14456" - ], - [ - "gene_synonym", - "ysaD" - ], - [ - "gene_synonym", - "GeneID:5625575" - ], - [ - "gene_synonym", - "ECK4460" - ] - ], - "dna_sequence": "TATTGCATGGAGCAGGCCGACAACGTCGAGTCACTGCATAACCTGTTGCTGCCCGCCGATGCGCCATTTACGACATTTGAAGGCAAGGGATTGTTCAGCCATAAGATCCTGATTCAGACGCCAGGTTCCCGGTATGAACAGAGCAATCCAGAGCAACAACCTTTGTGGCATTACGACGGAGCACCAGCCGCA", - "dna_sequence_length": 192, - "id": "CDS_3525", - "location": [ - [ - "NC_000913", - 3750918, - "+", - 192 - ] - ], - "md5": "2e0209278bdd0f7e98a59f807d630b72", - "parent_gene": "", - "protein_md5": "1488a64af633bd035cc2a2b56e1c8a16", - "protein_translation": "YCMEQADNVESLHNLLLPADAPFTTFEGKGLFSHKILIQTPGSRYEQSNPEQQPLWHYDGAPAA", - "protein_translation_length": 64, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011704" - ], - [ - "gene_synonym", - "b3584" - ], - [ - "gene_synonym", - "yiaT" - ], - [ - "gene_synonym", - "JW3556" - ], - [ - "gene_synonym", - "GeneID:948097" - ], - [ - "gene_synonym", - "EcoGene:EG12288" - ], - [ - "gene_synonym", - "GI:16131455" - ], - [ - "gene_synonym", - "ECK3573" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37681" - ], - [ - "gene_synonym", - "NP_418041.1" - ] - ], - "dna_sequence": "ATGTTAATTAATCGCAATATTGTGGCGTTATTTGCGTTGCCTTTTATGGCAAGCGCAACTGCTTCTGAATTATCCATTGGTGCTGGTGCGGCTTATAATGAATCGCCTTATCGCGGTTATAATGAAAATACGAAGGCAATTCCGCTGATTAGTTATGAAGGTGATACTTTTTATGTTCGTCAGACCACGTTAGGTTTTATTCTGTCGCAAAGTGAAAAAAATGAACTTAGCCTGACCGCATCCTGGATGCCGCTGGAATTTGACCCTACCGATAATGACGATTATGCCATGCAACAGCTTGATAAGCGTGATAGTACGGCTATGGCGGGGGTTGCCTGGTATCACCACGAGCGTTGGGGAACCGTGAAAGCCTCTGCAGCTGCGGACGTTCTGGATAACAGCAACGGCTGGGTGGGGGAGCTATCGGTATTCCACAAAATGCAGATAGGTCGTCTGTCGCTGACACCTGCGCTGGGCGTTCTCTATTATGACGAGAATTTCAGTGACTATTACTATGGCATTTCAGAGAGTGAGTCCCGTCGTAGCGGTCTGGCAAGTTATTCCGCGCAGGATGCCTGGGTGCCCTATGTCAGCCTGACGGCAAAATACCCGATAGGAGAGCACGTCGTATTGATGGCGAGCGCAGGATACAGCGAGCTGCCGGAAGAGATTACCGACAGCCCGATGATTGATCGTAATGAGAGTTTTACCTTTGTCACCGGGGTGAGCTGGCGTTTTTAA", - "dna_sequence_length": 741, - "functions": [ - "putative outer membrane protein" - ], - "id": "CDS_3526", - "location": [ - [ - "NC_000913", - 3751868, - "-", - 741 - ] - ], - "md5": "560611f2e857c42a4dba6fcc31dfe68d", - "parent_gene": "", - "protein_md5": "dc4bad519aca1386f55dcc159cc9739f", - "protein_translation": "MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNENTKAIPLISYEGDTFYVRQTTLGFILSQSEKNELSLTASWMPLEFDPTDNDDYAMQQLDKRDSTAMAGVAWYHHERWGTVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGVLYYDENFSDYYYGISESESRRSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGYSELPEEITDSPMIDRNESFTFVTGVSWRF", - "protein_translation_length": 246, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3585" - ], - [ - "gene_synonym", - "yiaU" - ], - [ - "gene_synonym", - "ASAP:ABE-0011710" - ], - [ - "gene_synonym", - "JW3557" - ], - [ - "gene_synonym", - "NP_418042.1" - ], - [ - "gene_synonym", - "EcoGene:EG12289" - ], - [ - "gene_synonym", - "GI:16131456" - ], - [ - "gene_synonym", - "GeneID:948107" - ], - [ - "gene_synonym", - "ECK3574" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37682" - ] - ], - "dna_sequence": "ATGACAAAATTACAACTTAAGTACCGGGAGTTAAAAATTATCTCGGTAATCGCTGCCAGTGAAAATATCAGCCATGCCGCGACTGTACTTGGCATCGCACAGGCCAACGTCAGCAAATATCTTGCTGATTTTGAATCAAAAGTGGGTTTAAAAGTCTTTGACCGAACCACCCGGCAGCTGATGCTCACACCTTTTGGCACCGCGCTGTTACCGTACATCAACGACATGCTGGACAGAAACGAGCAACTTAATAATTTTATTGCAGATTATAAGCATGAGAAACGTGGTCGGGTCACCATCTACGCCCCAACCGGCATAATTACCTATTTATCCAAACATGTAATCGATAAAATTAAAGATATCGGTGATATCACCTTATCGCTAAAAACCTGCAATCTTGAGCGTAATGCCTTTTATGAAGGCGTCGAATTTCCTGATGATTGTGATGTTTTAATCAGCTACGCTCCACCAAAAGATGAATCGCTGGTTGCCAGTTTTATTACCCAATATGCCGTAACCGCTTATGCCAGCCAGCGCTATCTTGAGAAACATCCCATTAGCCGTCCTGACGAACTCGAACATCACTCCTGTATTTTGATCGACTCGATGATGATCGACGACGCGAATATCTGGCGCTTCAACGTCGCCGGGAGTAAAGAGGTGCGGGATTATCGCGTGAAGGGAAATTACGTTTGCGACAACACGCAATCTGCGCTGGAGCTGGCACGAAATCACCTGGGGATTGTGTTTGCGCCAGACAAAAGTGTGCAGAGCGACCTGCAAGACGGCACGCTGGTGCCCTGCTTTCAGCAACCCTATGAATGGTGGCTGGATCTGGTGGCTATCTTCCGTAAACGGGAATACCAGCCCTGGCGGGTCCAGTATGTGCTGGATGAAATGCTGCGTGAAATTCGCCACCAGCTTGCTCAGTCGCAGCAACTGCGGCCTGAACAAGCGGCGGAAAGCGAAGATTAA", - "dna_sequence_length": 975, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_3527", - "location": [ - [ - "NC_000913", - 3751992, - "+", - 975 - ] - ], - "md5": "f21160d04a5bd2c569c1858b37cf327c", - "parent_gene": "", - "protein_md5": "7da09c1ecc2f77674543180e545c8ff4", - "protein_translation": "MTKLQLKYRELKIISVIAASENISHAATVLGIAQANVSKYLADFESKVGLKVFDRTTRQLMLTPFGTALLPYINDMLDRNEQLNNFIADYKHEKRGRVTIYAPTGIITYLSKHVIDKIKDIGDITLSLKTCNLERNAFYEGVEFPDDCDVLISYAPPKDESLVASFITQYAVTAYASQRYLEKHPISRPDELEHHSCILIDSMMIDDANIWRFNVAGSKEVRDYRVKGNYVCDNTQSALELARNHLGIVFAPDKSVQSDLQDGTLVPCFQQPYEWWLDLVAIFRKREYQPWRVQYVLDEMLREIRHQLAQSQQLRPEQAAESED", - "protein_translation_length": 324, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011712" - ], - [ - "gene_synonym", - "b3586" - ], - [ - "gene_synonym", - "GeneID:948106" - ], - [ - "gene_synonym", - "yiaV" - ], - [ - "gene_synonym", - "JW3558" - ], - [ - "gene_synonym", - "NP_418043.1" - ], - [ - "gene_synonym", - "GI:16131457" - ], - [ - "gene_synonym", - "EcoGene:EG12290" - ], - [ - "gene_synonym", - "ECK3575" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37683" - ] - ], - "dna_sequence": "ATGGATTTACTGATTATTTTGACCTATGTGGCTTTTGCATGGGCAATGTTTAAGATCTTCAAAATTCCCGTAAATAAATGGACCATTCCCACAGCGGCCCTGGGTGGAATATTTATTGTCAGCGGTCTAATTCTGTTAATGAACTATAACCATCCGTATACCTTTAAAGCGCAAAAAGCGGTTATTTCTATTCCTGTTGTCCCACAGGTGACTGGTGTGGTGATTGAAGTGACGGATAAGAAAAATACGCTGATTAAAAAAGGTGAGGTGCTATTTCGACTGGACCCGACGCGTTATCAGGCGCGGGTGGATCGGCTGATGGCGGATATCGTTACCGCAGAACATAAACAGCGGGCGTTGGGCGCAGAGTTAGATGAGATGGCGGCGAATACTCAGCAGGCAAAGGCCACGCGGGATAAATTCGCTAAAGAGTATCAGCGTTACGCACGTGGCAGCCAGGCGAAAGTAAACCCGTTTTCAGAACGCGATATCGATGTGGCGCGGCAAAATTATCTGGCGCAGGAAGCCTCCGTGAAGTCATCGGCGGCGGAACAAAAACAGATCCAGAGCCAGCTGGATAGCCTGGTGTTGGGTGAACATTCTCAAATCGCCAGCCTGAAAGCACAGCTCGCGGAAGCAAAATATAACCTTGAGCAGACGATAGTGCGTGCGCCGAGCGATGGTTATGTGACCCAGGTACTGATTCGTCCGGGTACCTATGCCGCGTCGCTGCCGCTACGTCCGGTGATGGTGTTTATACCCGATCAGAAACGACAAATCGTGGCGCAGTTCCGTCAGAACTCCTTGCTGCGACTGGCTCCTGGCGACGATGCGGAAGTGGTGTTTAATGCTCTGCCAGGTAAGGTATTCAGCGGTAAGCTGGCAGCCATTAGTCCAGCCGTTCCCGGCGGAGCTTATCAGTCGACCGGCACCTTACAGACGTTAAACACAGCGCCGGGTTCAGATGGCGTTATCGCGACCATTGAACTGGATGAGCACACTGATTTGAGCGCTTTACCAGACGGTATTTACGCCCAGGTGGCGGTTTACTCTGATCATTTCAGCCATGTCTCGGTGATGCGCAAAGTGCTATTACGCATGACCAGCTGGGTGCATTACCTTTATCTCGATCATTAA", 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"gene_synonym", - "JW3559" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADK4" - ], - [ - "gene_synonym", - "EcoGene:EG12291" - ], - [ - "gene_synonym", - "GeneID:948105" - ], - [ - "gene_synonym", - "GI:16131458" - ], - [ - "gene_synonym", - "ECK3576" - ] - ], - "dna_sequence": "ATGTTCCTGGACTATTTTGCACTGGGAGTGCTTATTTTTGTATTTCTGGTGATCTTCTATGGGATCATTATTTTACATGATATTCCCTACCTGATTGCCAAAAAACGTAATCATCCTCATGCCGACGCCATTCATGTTGCTGGTTGGGTGAGTCTTTTTACGTTACATGTTATCTGGCCGTTTTTGTGGATTTGGGCCACGCTTTACCGCCCGGAGCGGGGATGGGGAATGCAAAGCCATGATTCATCCGTTATGCAACTGCAACAGCGCATTGCCGGGCTGGAGAAACAGCTCGCCGACATCAAATCCTCTTCTGCCGAGTAA", - "dna_sequence_length": 324, - "functions": [ - "DUF3302 family inner membrane protein" - ], - "id": "CDS_3529", - "location": [ - [ - "NC_000913", - 3754428, - "-", - 324 - ] - ], - "md5": "e15b69769fcb91a8f21f07aec0059960", - "parent_gene": "", - "protein_md5": "03a5722e1ec4e7ab4e3ea0042c06e0fa", - "protein_translation": "MFLDYFALGVLIFVFLVIFYGIIILHDIPYLIAKKRNHPHADAIHVAGWVSLFTLHVIWPFLWIWATLYRPERGWGMQSHDSSVMQLQQRIAGLEKQLADIKSSSAE", - "protein_translation_length": 107, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948104" - ], - [ - "gene_synonym", - "JW3561" - ], - [ - "gene_synonym", - "yiaX" - ], - [ - "gene_synonym", - "ASAP:ABE-0011718" - ], - [ - "gene_synonym", - "b3588" - ], - [ - "gene_synonym", - "GI:90111619" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37685" - ], - [ - "gene_synonym", - "EcoGene:EG12292" - ], - [ - "gene_synonym", - "NP_418045.4" - ], - [ - "gene_synonym", - "aldB" - ], - [ - "gene_synonym", - "ECK3577" - ] - ], - "dna_sequence": "ATGACCAATAATCCCCCTTCAGCACAGATTAAGCCCGGCGAGTATGGTTTCCCCCTCAAGTTAAAAGCCCGCTATGACAACTTTATTGGCGGCGAATGGGTAGCCCCTGCCGACGGCGAGTATTACCAGAATCTGACGCCGGTGACCGGGCAGCTGCTGTGCGAAGTGGCGTCTTCGGGCAAACGAGACATCGATCTGGCGCTGGATGCTGCGCACAAAGTGAAAGATAAATGGGCGCACACCTCGGTGCAGGATCGTGCGGCGATTCTGTTTAAGATTGCCGATCGAATGGAACAAAACCTCGAGCTGTTAGCGACAGCTGAAACCTGGGATAACGGCAAACCCATTCGCGAAACCAGTGCTGCGGATGTACCGCTGGCGATTGACCATTTCCGCTATTTCGCCTCGTGTATTCGGGCGCAGGAAGGTGGGATCAGTGAAGTTGATAGCGAAACCGTGGCCTATCATTTCCATGAACCGTTAGGCGTGGTGGGGCAGATTATCCCGTGGAACTTCCCGCTGCTGATGGCGAGCTGGAAAATGGCTCCCGCGCTGGCGGCGGGCAACTGTGTGGTGCTGAAACCCGCACGTCTTACCCCGCTTTCTGTACTGCTGCTAATGGAAATTGTCGGTGATTTACTGCCGCCGGGCGTGGTGAACGTGGTCAATGGCGCAGGTGGGGTAATTGGCGAATATCTGGCGACCTCGAAACGCATCGCCAAAGTGGCGTTTACCGGCTCAACGGAAGTGGGCCAACAAATTATGCAATACGCAACGCAAAACATTATTCCGGTGACGCTGGAGTTGGGCGGTAAGTCGCCAAATATCTTCTTTGCTGATGTGATGGATGAAGAAGATGCCTTTTTCGATAAAGCGCTGGAAGGCTTTGCACTGTTTGCCTTTAACCAGGGCGAAGTTTGCACCTGTCCGAGTCGTGCTTTAGTGCAGGAATCTATCTACGAACGCTTTATGGAACGCGCCATCCGCCGTGTCGAAAGCATTCGTAGCGGTAACCCGCTCGACAGCGTGACGCAAATGGGCGCGCAGGTTTCTCACGGGCAACTGGAAACCATCCTCAACTACATTGATATCGGTAAAAAAGAGGGCGCTGACGTGCTCACAGGCGGGCGGCGCAAGCTGCTGGAAGGTGAACTGAAAGACGGCTACTACCTCGAACCGACGATTCTGTTTGGTCAGAACAATATGCGGGTGTTCCAGGAGGAGATTTTTGGCCCGGTGCTGGCGGTGACCACCTTCAAAACGATGGAAGAAGCGCTGGAGCTGGCGAACGATACGCAATATGGCCTGGGCGCGGGCGTCTGGAGCCGCAACGGTAATCTGGCCTATAAGATGGGGCGCGGCATACAGGCTGGGCGCGTGTGGACCAACTGTTATCACGCTTACCCGGCACATGCGGCGTTTGGTGGCTACAAACAATCAGGTATCGGTCGCGAAACCCACAAGATGATGCTGGAGCATTACCAGCAAACCAAGTGCCTGCTGGTGAGCTACTCGGATAAACCGTTGGGGCTGTTCTGA", - "dna_sequence_length": 1539, - "functions": [ - "aldehyde dehydrogenase B" - ], - "id": "CDS_3530", - "location": [ - [ - "NC_000913", - 3756511, - "-", - 1539 - ] - ], - "md5": "6fe5ecfb71e6cad5a428c90ac7933080", - "parent_gene": "", - "protein_md5": "f322a8aeec9a39529737150d950df3d6", - "protein_translation": "MTNNPPSAQIKPGEYGFPLKLKARYDNFIGGEWVAPADGEYYQNLTPVTGQLLCEVASSGKRDIDLALDAAHKVKDKWAHTSVQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEPLGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGVVNVVNGAGGVIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYERFMERAIRRVESIRSGNPLDSVTQMGAQVSHGQLETILNYIDIGKKEGADVLTGGRRKLLEGELKDGYYLEPTILFGQNNMRVFQEEIFGPVLAVTTFKTMEEALELANDTQYGLGAGVWSRNGNLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMMLEHYQQTKCLLVSYSDKPLGLF", - "protein_translation_length": 512, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_026233.1" - ], - [ - "gene_synonym", - "GeneID:948102" - ], - [ - "gene_synonym", - "yiaY" - ], - [ - "gene_synonym", - "b3589" - ], - [ - "gene_synonym", - "ECK3578" - ], - [ - "gene_synonym", - "EcoGene:EG12293" - ], - [ - "gene_synonym", - "ASAP:ABE-0011725" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37686" - ], - [ - "gene_synonym", - "JW5648" - ], - [ - "gene_synonym", - "GI:49176377" - ] - ], - "dna_sequence": "ATGGCAGCTTCAACGTTCTTTATTCCTTCTGTGAATGTCATCGGCGCTGATTCATTGACTGATGCAATGAATATGATGGCAGATTATGGATTTACCCGTACCTTAATTGTCACTGACAATATGTTAACGAAATTAGGTATGGCGGGCGATGTGCAAAAAGCACTGGAAGAACGCAATATTTTTAGCGTTATTTATGATGGCACCCAACCTAACCCCACCACGGAAAACGTCGCCGCAGGTTTGAAATTACTTAAAGAGAATAATTGCGATAGCGTGATCTCCTTAGGCGGTGGTTCTCCACACGACTGCGCAAAAGGTATTGCGCTGGTGGCAGCCAATGGCGGCGATATTCGCGATTACGAAGGCGTTGACCGCTCTGCAAAACCGCAGCTGCCGATGATCGCCATCAATACCACGGCGGGTACGGCCTCTGAAATGACCCGTTTCTGCATCATCACTGACGAAGCGCGTCATATCAAAATGGCGATTGTTGATAAACATGTCACTCCGCTGCTTTCTGTCAATGACTCCTCTCTGATGATTGGTATGCCGAAGTCACTGACCGCCGCAACGGGTATGGATGCCTTAACGCACGCTATCGAAGCATATGTTTCTATTGCCGCCACGCCGATCACTGACGCTTGTGCACTGAAAGCCGTGACCATGATTGCCGAAAACCTGCCGTTAGCCGTTGAAGATGGCAGTAATGCGAAAGCGCGTGAAGCAATGGCTTATGCCCAGTTCCTCGCCGGTATGGCGTTCAATAATGCTTCTCTGGGTTATGTTCATGCGATGGCGCACCAGCTGGGCGGTTTCTACAACCTGCCACACGGTGTATGTAACGCCGTTTTGCTGCCGCACGTTCAGGTATTCAACAGCAAAGTCGCCGCTGCACGTCTGCGTGACTGTGCCGCTGCAATGGGCGTGAACGTGACAGGTAAAAACGACGCGGAAGGTGCTGAAGCCTGCATTAACGCCATCCGTGAACTGGCGAAGAAAGTGGATATCCCGGCAGGCCTACGCGACCTGAACGTGAAAGAAGAAGATTTCGCGGTATTGGCGACTAATGCCCTGAAAGATGCCTGTGGCTTTACTAACCCGATCCAGGCAACTCACGAAGAAATTGTGGCGATTTATCGCGCAGCGATGTAA", - "dna_sequence_length": 1152, - "functions": [ - "L-threonine dehydrogenase" - ], - "id": "CDS_3531", - "location": [ - [ - "NC_000913", - 3757827, - "-", - 1152 - ] - ], - "md5": "8c53bf23b04260e1682b5222a028c0e9", - "parent_gene": "", - "protein_md5": "c5954c33b06d050367dfd04212fa7006", - "protein_translation": "MAASTFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDNMLTKLGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGLKLLKENNCDSVISLGGGSPHDCAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCIITDEARHIKMAIVDKHVTPLLSVNDSSLMIGMPKSLTAATGMDALTHAIEAYVSIAATPITDACALKAVTMIAENLPLAVEDGSNAKAREAMAYAQFLAGMAFNNASLGYVHAMAHQLGGFYNLPHGVCNAVLLPHVQVFNSKVAAARLRDCAAAMGVNVTGKNDAEGAEACINAIRELAKKVDIPAGLRDLNVKEEDFAVLATNALKDACGFTNPIQATHEEIVAIYRAAM", - "protein_translation_length": 383, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3590" - ], - [ - "gene_synonym", - "GeneID:948103" - ], - [ - "gene_synonym", - "JW3563" - ], - [ - "gene_synonym", - "GI:16131461" - ], - [ - "gene_synonym", - "NP_418047.1" - ], - [ - "gene_synonym", - "selB" - ], - [ - "gene_synonym", - "ECK3579" - ], - [ - "gene_synonym", - "ASAP:ABE-0011729" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P14081" - ], - [ - "gene_synonym", - "fdhA" - ], - [ - "gene_synonym", - "EcoGene:EG10942" - ] - ], - "dna_sequence": "ATGATTATTGCGACTGCCGGACACGTTGACCACGGCAAAACAACCTTATTGCAGGCGATTACTGGCGTAAATGCTGACCGTCTGCCGGAAGAAAAAAAGCGCGGCATGACCATCGATCTCGGCTATGCCTACTGGCCGCAGCCGGATGGTCGCGTGCCTGGTTTTATCGACGTTCCCGGTCATGAAAAGTTTCTTTCCAACATGCTGGCGGGCGTTGGTGGTATCGATCACGCGCTGTTGGTGGTGGCGTGCGATGACGGCGTGATGGCACAGACCCGTGAGCATCTGGCGATTTTGCAGCTGACCGGTAACCCGATGCTGACAGTGGCGCTGACCAAAGCCGATCGCGTGGACGAAGCGCGTGTTGATGAGGTTGAACGCCAGGTAAAGGAGGTTCTGCGGGAATACGGTTTTGCTGAGGCAAAACTGTTTATCACCGCAGCAACCGAAGGTCGGGGAATGGATGCCCTGCGCGAGCATCTGCTTCAGTTGCCGGAACGCGAGCACGCCAGCCAACATAGTTTCCGCCTCGCGATTGACCGCGCATTTACCGTAAAAGGTGCCGGGCTGGTCGTCACCGGTACGGCGTTAAGCGGGGAAGTGAAGGTAGGCGATTCACTCTGGCTGACTGGTGTAAATAAACCGATGCGTGTACGTGCGCTGCATGCGCAAAACCAGCCAACAGAAACCGCCAATGCCGGGCAGCGTATCGCGCTTAACATCGCGGGTGATGCGGAAAAAGAGCAGATTAACCGTGGCGACTGGCTGCTTGCCGATGTGCCGCCAGAGCCGTTCACACGGGTGATTGTCGAGCTTCAAACCCATACACCGCTGACCCAGTGGCAGCCGCTGCATATTCACCACGCCGCCAGCCACGTCACGGGACGCGTTTCACTGCTGGAAGATAACCTTGCTGAACTGGTCTTCGACACCCCGTTATGGCTGGCAGATAACGACCGCCTGGTATTGCGCGATATCTCTGCCCGCAACACGCTGGCCGGAGCGCGCGTCGTGATGCTTAACCCGCCGCGTCGCGGTAAACGTAAGCCGGAATATCTGCAATGGCTGGCGTCTCTTGCACGGGCGCAGAGCGATGCCGATGCGTTATCTGTTCATCTGGAACGCGGCGCGGTTAACCTTGCGGATTTCGCCTGGGCGCGCCAGCTCAACGGCGAAGGGATGCGCGAATTGCTGCAACAGCCTGGTTATATTCAGGCTGGTTATAGCTTGTTGAATGCGCCGGTTGCCGCCCGCTGGCAGCGGAAAATTCTCGACACATTAGCGACTTATCATGAGCAACATCGCGATGAACCTGGCCCTGGGCGCGAACGTCTGCGACGTATGGCGTTGCCAATGGAAGATGAAGCGCTGGTACTGTTGCTGATTGAAAAGATGCGCGAAAGCGGCGACATCCACAGCCATCACGGCTGGCTGCATCTGCCAGATCACAAAGCGGGCTTCAGCGAAGAGCAGCAGGCCATCTGGCAAAAAGCAGAGCCACTGTTTGGTGACGAACCGTGGTGGGTGCGTGACCTGGCAAAAGAGACGGGAACCGACGAGCAGGCAATGCGCCTGACTCTACGCCAGGCGGCGCAGCAAGGAATAATTACCGCGATCGTTAAAGATCGTTATTACCGTAACGATCGGATTGTCGAGTTTGCCAATATGATCCGCGATCTCGATCAGGAGTGTGGTTCAACCTGCGCGGCGGATTTCCGCGATCGCTTAGGCGTAGGCCGAAAGCTGGCAATTCAGATTCTGGAATATTTTGACCGCATTGGCTTTACGCGTCGTCGTGGAAATGATCATTTATTGCGCGACGCATTATTATTTCCGGAAAAATAA", - "dna_sequence_length": 1845, - "functions": [ - "selenocysteinyl-tRNA-specific translation factor" - ], - "id": "CDS_3532", - "location": [ - [ - "NC_000913", - 3759861, - "-", - 1845 - ] - ], - "md5": "8143b04930561228cdce017983b19bd8", - "parent_gene": "", - "protein_md5": "4b2fc7c4ace87fe8f692990849e0bbe4", - "protein_translation": "MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGMDALREHLLQLPEREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRVRALHAQNQPTETANAGQRIALNIAGDAEKEQINRGDWLLADVPPEPFTRVIVELQTHTPLTQWQPLHIHHAASHVTGRVSLLEDNLAELVFDTPLWLADNDRLVLRDISARNTLAGARVVMLNPPRRGKRKPEYLQWLASLARAQSDADALSVHLERGAVNLADFAWARQLNGEGMRELLQQPGYIQAGYSLLNAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMALPMEDEALVLLLIEKMRESGDIHSHHGWLHLPDHKAGFSEEQQAIWQKAEPLFGDEPWWVRDLAKETGTDEQAMRLTLRQAAQQGIITAIVKDRYYRNDRIVEFANMIRDLDQECGSTCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPEK", - "protein_translation_length": 614, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3591" - ], - [ - "gene_synonym", - "JW3564" - ], - [ - "gene_synonym", - "ECK3580" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A821" - ], - [ - "gene_synonym", - "GI:16131462" - ], - [ - "gene_synonym", - "selA" - ], - [ - "gene_synonym", - "GeneID:948124" - ], - [ - "gene_synonym", - "NP_418048.1" - ], - [ - "gene_synonym", - "fdhA" - ], - [ - "gene_synonym", - "EcoGene:EG10941" - ], - [ - "gene_synonym", - "ASAP:ABE-0011731" - ] - ], - "dna_sequence": "ATGACAACCGAAACGCGTTCCCTCTATAGTCAACTTCCGGCTATTGATCGCTTATTGCGCGATAGCTCCTTCCTTTCTTTGCGTGATACTTATGGTCACACCCGCGTGGTGGAATTGTTGCGTCAGATGCTCGACGAAGCGCGAGAAGTGATTCGTGGCAGCCAGACGCTGCCTGCGTGGTGTGAAAACTGGGCGCAAGAAGTCGATGCCCGGTTGACGAAAGAAGCGCAGAGCGCGCTGCGTCCGGTGATCAACCTGACGGGAACCGTGCTGCATACCAACCTTGGGCGAGCTTTACAGGCGGAAGCCGCGGTGGAAGCCGTTGCGCAGGCTATGCGTTCGCCAGTGACCCTCGAGTATGATCTGGACGACGCCGGACGCGGACATCGCGATCGGGCGCTGGCGCAGCTGCTGTGCCGTATTACGGGGGCGGAAGATGCCTGTATCGTCAATAACAATGCGGCGGCGGTGTTATTGATGTTGGCGGCCACTGCCAGCGGAAAAGAGGTGGTGGTATCTCGCGGCGAACTGGTGGAGATTGGCGGCGCGTTTCGTATTCCCGATGTTATGCGTCAGGCAGGCTGCACCCTACACGAAGTAGGGACCACCAACCGCACGCACGCGAATGATTATCGTCAGGCGGTGAATGAAAATACCGCACTGTTGATGAAAGTACATACCAGTAACTACAGCATTCAGGGGTTCACCAAAGCGATAGATGAAGCGGAACTGGTGGCGCTCGGCAAAGAGCTGGATGTTCCCGTAGTGACTGATTTAGGCAGTGGCTCGCTGGTCGATCTTAGCCAGTACGGTTTGCCGAAAGAGCCAATGCCGCAGGAGTTGATTGCGGCGGGCGTCAGTCTGGTGAGTTTCTCCGGCGACAAGTTGTTAGGCGGGCCGCAGGCAGGAATTATTGTTGGTAAAAAAGAGATGATCGCCCGCCTGCAAAGCCACCCGCTGAAGCGTGCATTACGCGCGGATAAAATGACCCTCGCGGCGCTGGAAGCCACGTTGCGTCTTTATTTACACCCTGAAGCTCTGAGTGAAAAATTACCGACCCTGCGCCTGCTTACCCGCAGCGCAGAGGTCATTCAAATCCAGGCACAACGTTTACAGGCCCCCCTTGCCGCACATTACGGCGCGGAGTTTGCGGTACAGGTTATGCCATGTCTTTCGCAGATTGGCAGTGGTTCGCTGCCGGTTGATCGCCTGCCGAGCGCGGCATTAACGTTTACACCCCATGATGGACGCGGTAGCCACCTTGAGTCATTAGCCGCCCGCTGGCGTGAATTGCCAGTGCCGGTGATTGGTCGTATTTATGACGGACGATTGTGGCTGGATTTACGCTGCCTTGAAGATGAGCAACGGTTTTTGGAGATGTTGTTGAAATGA", - "dna_sequence_length": 1392, - "functions": [ - "selenocysteine synthase" - ], - "id": "CDS_3533", - "location": [ - [ - "NC_000913", - 3761249, - "-", - 1392 - ] - ], - "md5": "48a25442b99d7019836fa02b86c6084d", - "parent_gene": "", - "protein_md5": "46878df06908678544228c509871d19f", - "protein_translation": "MTTETRSLYSQLPAIDRLLRDSSFLSLRDTYGHTRVVELLRQMLDEAREVIRGSQTLPAWCENWAQEVDARLTKEAQSALRPVINLTGTVLHTNLGRALQAEAAVEAVAQAMRSPVTLEYDLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLMLAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNENTALLMKVHTSNYSIQGFTKAIDEAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEPMPQELIAAGVSLVSFSGDKLLGGPQAGIIVGKKEMIARLQSHPLKRALRADKMTLAALEATLRLYLHPEALSEKLPTLRLLTRSAEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLSQIGSGSLPVDRLPSAALTFTPHDGRGSHLESLAARWRELPVPVIGRIYDGRLWLDLRCLEDEQRFLEMLLK", - "protein_translation_length": 463, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3565" - ], - [ - "gene_synonym", - "b3592" - ], - [ - "gene_synonym", - "NP_418049.1" - ], - [ - "gene_synonym", - "EcoGene:EG11762" - ], - [ - "gene_synonym", - "ECK3581" - ], - [ - "gene_synonym", - "GI:16131463" - ], - [ - "gene_synonym", - "yibF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACA1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011736" - ], - [ - "gene_synonym", - "GeneID:948113" - ] - ], - "dna_sequence": "ATGAAACTCGTCGGTAGCTACACCAGCCCGTTTGTACGCAAACTTTCTATTCTGTTGTTAGAAAAGGGCATAACTTTCGAATTTATTAATGAACTGCCCTATAACGCGGACAACGGCGTGGCGCAATTTAACCCGTTAGGAAAAGTGCCGGTGCTGGTGACCGAAGAGGGCGAATGCTGGTTTGATTCGCCGATCATCGCTGAATATATTGAATTAATGAATGTCGCTCCGGCGATGTTGCCGCGCGATCCGCTGGAGTCGTTGCGGGTGCGCAAAATTGAGGCACTGGCGGATGGCATTATGGATGCCGGGCTGGTATCGGTGCGTGAACAGGCGCGTCCAGCGGCGCAGCAGTCTGAAGATGAATTGTTACGCCAGCGGGAGAAAATCAACCGCAGTCTGGATGTGCTGGAAGGATATCTGGTCGATGGCACACTCAAAACCGATACGGTCAATCTGGCGACTATCGCCATTGCCTGTGCCGTCGGATATCTCAATTTCCGCCGCGTTGCGCCAGGTTGGTGTGTCGACCGCCCACACTTAGTCAAACTGGTCGAAAACCTGTTTAGCCGCGAAAGTTTTGCTCGCACCGAACCGCCAAAGGCTTGA", - "dna_sequence_length": 609, - "functions": [ - "glutathione S-transferase homolog" - ], - "id": "CDS_3534", - "location": [ - [ - "NC_000913", - 3761955, - "-", - 609 - ] - ], - "md5": "92ac3e61822c340a23fec01503510701", - "parent_gene": "", - "protein_md5": "bdf43d94844e8e1113c69c49f67c0e25", - "protein_translation": "MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMDAGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFSRESFARTEPPKA", - "protein_translation_length": 202, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3566" - ], - [ - "gene_synonym", - "ECK3582" - ], - [ - "gene_synonym", - "GI:16131464" - ], - [ - "gene_synonym", - "NP_418050.1" - ], - [ - "gene_synonym", - "b3593" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16916" - ], - [ - "gene_synonym", - "GeneID:948120" - ], - [ - "gene_synonym", - "ASAP:ABE-0011742" - ], - [ - "gene_synonym", - "EcoGene:EG10846" - ], - [ - "gene_synonym", - "rhsA" - ] - ], - "dna_sequence": "ATGAGCGGAAAACCGGCAGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTGCGCATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCACCTGTTTCCCGGTGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCACCATCACCGACAGCCTGGACCGCCGTGAAGTGCTGCACACGCAGGGCGAAGCCGGGCTGAAGCGGGTGGTGAAAAAGGAACACGCGGACGGCAGCGTCACGCAGAGTCAGTTTGACGCCGTGGGCAGGCTCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCAGATGACGGCGGTGCACCGCGAGGAAGGGCTGAGTCAGTACCGCGCATACGACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTAACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGAACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACAATACAGAACGACAGAACCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGAGTTGAAACCGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCGCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCCCTTATCAGCAAGGAAGGGACAACAGAATGGTGCGCAGAATACGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGCCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCAGTTACGAATACAGATCCTCTGGGGTTAGAAGTTTTTCCTAGACCATTCCCCTTGCCAATTCCATGGCCCAAAAGCCCTGCACAGCAGCAAGCAGATGATAATGCTGCAAAAGCATTGACAAAATGGTGGAACGATACAGCATCACAAAGAATATTTGACTCTCTAATATTGAATAATCCGGGACTAGCATTAGATATAACAATGATAGCTTCTCGTGGAAATGTTGCAGACACAGGGATAACTGATCGTGTCAATGACATAATAAATGACAGATTCTGGAGTGATGGGAAAAAACCCGACAGATGTGACGTACTTCAGGAACTAATTGATTGTGGTGATATTAGTGCTAAAGATGCAAAAAGCACACAGAAAGCCTGGAATTGTCGTCACTCCAGACAGTCAAACGATAAAAAAAGATAG", - "dna_sequence_length": 4134, - "functions": [ - "Rhs protein with putative toxin 55 domain", - "putative polysaccharide synthesis/export protein", - "putative neighboring cell growth inhibitor" - ], - "id": "CDS_3535", - "location": [ - [ - "NC_000913", - 3762183, - "+", - 4134 - ] - ], - "md5": "a84b7ee47ac8c45d3bfb6ed88e5f960b", - "parent_gene": "", - "protein_md5": "3b8768179878175baeb9ee0184e024b6", - "protein_translation": "MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNPLLGAKVLPGETDIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDGAWRHFRLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRGELAVVYDRSGKQVRSFTYDDKYRGRMVAHRHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLDRREVLHTQGEAGLKRVVKKEHADGSVTQSQFDAVGRLRAQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFYYNHHNQLTSATGPDGLELRREYDELGRLIQETAPDGDITRYRYDNPHSDLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQMTAVHREEGLSQYRAYDSRGQLIAVKDTQGHETRYEYNIAGDLTAVIAPDGSRNGTQYDAWGKAVRTTQGGLTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVKGETAERWQYDERGWLTDISHISEGHRVAVHYRYDEKGRLTGERQTVHHPQTEALLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGYLAGMKLGDTPLVEYTRDRLHRETLRSFGRYELTTAYTPAGQLQSQHLNSLLSDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIPYATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYEEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRTRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALISKEGTTEWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVTNTDPLGLEVFPRPFPLPIPWPKSPAQQQADDNAAKALTKWWNDTASQRIFDSLILNNPGLALDITMIASRGNVADTGITDRVNDIINDRFWSDGKKPDRCDVLQELIDCGDISAKDAKSTQKAWNCRHSRQSNDKKR", - "protein_translation_length": 1377, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418051.1" - ], - [ - "gene_synonym", - "b3594" - ], - [ - "gene_synonym", - "yibA" - ], - [ - "gene_synonym", - "ECK3583" - ], - [ - "gene_synonym", - "GI:16131465" - ], - [ - "gene_synonym", - "JW3568" - ], - [ - "gene_synonym", - "GeneID:948108" - ], - [ - "gene_synonym", - "EcoGene:EG11187" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADK6" - ], - [ - "gene_synonym", - "ASAP:ABE-0011744" - ] - ], - "dna_sequence": "ATGTCAAATACATACCAGAAAAGAAAGGCAAGTAAAGAGTATGGTTTATATAATCAATGTAAGAAACTAAATGATGATGAATTATTTCGCTTACTTGATGATCACAATTCCTTGAAAAGGATTTCATCTGCCAGAGTATTACAGTTAAGAGGTGGGCAAGACGCTGTTAGATTGGCAATTGAGTTCTGCTCTGATAAAAATTATATCCGTAGAGATATCGGAGCATTTATACTCGGGCAAATAAAAATTTGCAAAAAATGCGAAGATAATGTTTTTAATATTTTGAACAATATGGCATTGAATGATAAGAGCGCTTGCGTTCGAGCTACGGCAATCGAGTCAACGGCTCAGCGATGCAAGAAAAACCCAATTTATTCACCTAAAATAGTAGAACAATCTCAAATTACTGCTTTTGATAAATCGACTAATGTCAGACGTGCTACAGCATTTGCTATTTCTGTTATCAATGATAAAGCAACAATTCCACTATTGATTAATCTGTTAAAAGATCCAAATGGAGATGTCAGAAACTGGGCCGCATTTGCAATAAATATCAATAAATATGATAATAGTGATATTAGGGATTGTTTTGTGGAGATGCTTCAGGATAAAAATGAGGAAGTCCGTATTGAAGCAATAATCGGACTTTCCTACAGAAAAGATAAAAGGGTTTTATCTGTTTTATGCGATGAGTTAAAAAAAAATACTGTTTATGATGATATCATTGAAGCTGCGGGTGAATTAGGTGATAAAACGCTACTTCCTGTTTTAGATACTATGTTGTACAAGTTTGATGACAATGAAATTATAACTTCCGCTATTGATAAGCTGAAGCGTTCATAG", - "dna_sequence_length": 843, - "functions": [ - "putative immunity protein for polymorphic toxin RhsA", - "HEAT-domain protein", - "lethality reduction protein" - ], - "id": "CDS_3536", - "location": [ - [ - "NC_000913", - 3766337, - "+", - 843 - ] - ], - "md5": "c6e61b277393c7908e3c9b126e0d208e", - "parent_gene": "", - "protein_md5": "d18afbf78dee68b5e81f6540cfe98193", - "protein_translation": "MSNTYQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTMLYKFDDNEIITSAIDKLKRS", - "protein_translation_length": 280, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yibJ" - ], - [ - "gene_synonym", - "GeneID:948112" - ], - [ - "gene_synonym", - "b3595" - ], - [ - "gene_synonym", - "EcoGene:EG11766" - ], - [ - "gene_synonym", - "ECK3584" - ], - [ - "gene_synonym", - "JW5647" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32109" - ], - [ - "gene_synonym", - "rhsJ" - ], - [ - "gene_synonym", - "ASAP:ABE-0011746" - ] - ], - "dna_sequence": "GTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGAAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAGTGATGAGAACCCGCATCATCTGCAGCAGCTCATTCGCCTGCCGGGTCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGAAAGTGATCTTATCCATTCTGTAGCTGATGAGATTAATATCCCAGGCGTTTTCACAATCGGGGGGCATGGTACCCCCACATCTATTGAATCCGCAACGCGCAGTATCATGACAGCTAAAGATCTAGCATATCTAATTAAATTTGATGGGAATTATAAAGATGGGATGACAGTTTGGTTATTTTCTTGTAATACAGGTAAAGGACAAAATTCATTTGCTAGCTAATTAGCTAAAGAGTTACATACAAATGTAATAGGACCTGACACGCTATGGACGTGGTGGGGGCGAGGAACTAATGGTAAGTTAAAAATGGATACAGTGCTAACAGCACCAACGAACCTTAATTCAAATAAGGATCTAATGGCTATAACAACAAAAGACCTTGGTAATTGGATAACATATGGGCCATCTGGGCACCCCATTTCTAATATGCAAGGTACGCCAGAAAAACCCAGTGATATAAGATAG", - "dna_sequence_length": 945, - "id": "CDS_3537", - "location": [ - [ - "NC_000913", - 3767221, - "+", - 945 - ] - ], - "md5": "205b98c071c2317744aba7fbebe7887a", - "parent_gene": "", - "protein_md5": "e8b865487f9e172870c79a95e7b4dce5", - "protein_translation": "VQMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLLGRYITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPESDLIHSVADEINIPGVFTIGGHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTGKGQNSFAS", - "protein_translation_length": 233, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3596" - ], - [ - "gene_synonym", - "JW3570" - ], - [ - "gene_synonym", - "GeneID:948111" - ], - [ - "gene_synonym", - "EcoGene:EG11763" - ], - [ - "gene_synonym", - "ECK3585" - ], - [ - "gene_synonym", - "GI:16131467" - ], - [ - "gene_synonym", - "yibG" - ], - [ - "gene_synonym", - "NP_418053.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011750" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32106" - ] - ], - "dna_sequence": "ATGAAAGCATGCTTGTTACTATTTTTTTATTTCTCTTTTATTTGTCAATTGCATGGTGCTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATCATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATGGGGTCTTTTTATCAGATACAAATCCAACATTATCAGAATATTATAATTTGAATAGAGCTATTTATTGGATGGAATTCGCTGTAAATAACGGTAATATTGATGCAAAGAGCAAACTTCAAGAGCTCAAAAAGCTAAAGCGAATGGATAGAAGGAAGAATAAGGAGAATCCGTAA", - "dna_sequence_length": 462, - "functions": [ - "TPR-like repeat protein" - ], - "id": "CDS_3538", - "location": [ - [ - "NC_000913", - 3768177, - "+", - 462 - ] - ], - "md5": "35dc9d1812b29c35ee8584dc436b5778", - "parent_gene": "", - "protein_md5": "30109b9477ccfa4741d9b7bd0fac24bd", - "protein_translation": "MKACLLLFFYFSFICQLHGADVKIKQNESMMGSTAMTYDLSEEKLMKLKYKSQHGDSEASFRLYQYYCFTKNNIYKQLRFLERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWMEFAVNNGNIDAKSKLQELKKLKRMDRRKNKENP", - "protein_translation_length": 153, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:5625576" - ], - [ - "gene_synonym", - "b4650" - ], - [ - "gene_synonym", - "yibS" - ], - [ - "gene_synonym", - "ECK4440" - ], - [ - "gene_synonym", - "EcoGene:EG14348" - ] - ], - "dna_sequence": "AAGCAATAGTTCATCAGACTGCCGCAGCAGTAGTATGATGATGAATCAGGGCTGTACTATAACTATTATCGGTAACATTAACCGCAGCAGGGGCGGTATAACACTCAGGCTCCGATTGGGCTGGAAGGTAGGTGGAATTTTTATCAGTATCCGTTGAACCCGATTTCTGGAATCGATCCCCTTGGGATTAGCCACCTGTTTATACAGCATAACTTTAGGTATGCTTTCGTGTGTTTCAGATATACCATGTGA", - "dna_sequence_length": 252, - "id": "CDS_3539", - "location": [ - [ - "NC_000913", - 3768639, - "+", - 252 - ] - ], - "md5": "2cb15ea58b376dd04db37c3648c06771", - "parent_gene": "", - "protein_md5": "e7d06e530ab8792d58c0ebef4e0b36a4", - "protein_translation": "KQ", - "protein_translation_length": 2, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:5625577" - ], - [ - "gene_synonym", - "b4651" - ], - [ - "gene_synonym", - "EcoGene:EG14439" - ], - [ - "gene_synonym", - "ECK4450" - ], - [ - "gene_synonym", - "yibW" - ] - ], - "dna_sequence": "GATAATTTTTATGATGTGCTTAGTATTCCAGTCGCTTCTGGTAATAATATGCAATGTAAAAATAATCCCCGTTGTACACATTTAATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTAAATGAGTTAATATTTTCAGAGCCAGATAGCACATTAACAGTTACGGACTAA", - "dna_sequence_length": 366, - "id": "CDS_3540", - "location": [ - [ - "NC_000913", - 3768892, - "+", - 84 - ], - [ - "NC_000913", - 3768975, - "+", - 282 - ] - ], - "md5": "b30524cea59e1f9a3a393571ea71c6de", - "parent_gene": "", - "protein_md5": "5194423c7420509391cd7c8759e7eca2", - "protein_translation": "DNFYDVLSIPVASGNNMQCKNNPRCTHLINRWPIPQGLWSWNVNDPGASNRKPDGIRLVPSVNTGTYNRNGFSIHSCLNAFGPSLGPRFCSEGCITGLSNDMQKLNELIFSEPDSTLTVTD", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4615" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:A5A625" - ], - [ - "gene_synonym", - "GeneID:5061524" - ], - [ - "gene_synonym", - "EcoGene:EG14438" - ], - [ - "gene_synonym", - "yibV" - ], - [ - "gene_synonym", - "ECK4424" - ] - ], - "dna_sequence": "TTGGCAGACAAAGCAATATTATGGGCACTAATATCAGCCAGTACTAAAGAGGGACGAAAAGCGTGTTCACTAAGCTATTTTGCCTGTAAGGCCGCAGAGGCTGAACTCGGACTGGCATATATGGCTGCGAATGATAACAAGGAATTTCTCACATCCTTATCTAATATAATGAGGTACAAAATAGATGCTGGACTTTCCGAATCCTATACATGCTATTTATTAAGTAAGGGAAAGATCATAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATAAAATTGAGAGTTAATAGTACTATTATGGCCATTGATGATTCTATAAAGTGCATCGATGAATGA", - "dna_sequence_length": 438, - "id": "CDS_3541", - "location": [ - [ - "NC_000913", - 3769345, - "+", - 327 - ], - [ - "NC_000913", - 3769673, - "+", - 111 - ] - ], - "md5": "44f44016c461bb4f3f2cd412151ac46f", - "parent_gene": "", - "protein_md5": "00a5e0d1afca1498744384a0e97aa721", - "protein_translation": "LADKAILWALISASTKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYKIDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNKIKDKNKKIIDINSVNICSDDKNIKLRVNSTIMAIDDSIKCIDE", - "protein_translation_length": 145, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4652" - ], - [ - "gene_synonym", - "EcoGene:EG14437" - ], - [ - "gene_synonym", - "yibU" - ], - [ - "gene_synonym", - "GeneID:5625578" - ], - [ - "gene_synonym", - "ECK4449" - ] - ], - "dna_sequence": "GACTGTCATCCTTCAGATAATAAAGCCATCATCGCAATAGATGGAAAAGCACTCCTGCTCTTTTTTGATTAGAGCCGTCGCAGGAGGGGAACAACTCATATCATCATTGCGATCTCGACGATGTATAGTCTCATCCTGCGGCAGAACAAGACGGATAAAAAATCCAATGAGAGCACACTCATCCAGAACTTATTAACATAA", - "dna_sequence_length": 201, - "id": "CDS_3542", - "location": [ - [ - "NC_000913", - 3769948, - "+", - 87 - ], - [ - "NC_000913", - 3770033, - "+", - 114 - ] - ], - "md5": "2c04b9b800fc9b27a60626ad8838f6de", - "parent_gene": "", - "protein_md5": "9b0bbee01fd2cc2f2cb6c3447a493e14", - "protein_translation": "DCHPSDNKAIIAIDGKALLLFFD", - "protein_translation_length": 23, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yibH" - ], - [ - "gene_synonym", - "GI:16131468" - ], - [ - "gene_synonym", - "GeneID:948110" - ], - [ - "gene_synonym", - "JW3571" - ], - [ - "gene_synonym", - "NP_418054.1" - ], - [ - "gene_synonym", - "ECK3586" - ], - [ - "gene_synonym", - "ASAP:ABE-0011752" - ], - [ - "gene_synonym", - "EcoGene:EG11764" - ], - [ - "gene_synonym", - "b3597" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFV0" - ] - ], - "dna_sequence": "ATGGATCTATTGATTGTTTTAACTTACGTGGCGCTGGCGTGGGCGGTCTTTAAAATCTTCCGCATTCCGGTAAATCAGTGGACGCTGGCGACGGCGGCGCTGGGAGGCGTGTTTCTGGTGAGTGGTTTGATTTTGTTGATGAACTACAACCACCCTTACACTTTTACCGCGCAAAAGGCAGTGATAGCGATCCCTATCACGCCACAGGTGACGGGAATTGTTACTGAAGTCACTGACAAGAATAATCAGCTTATTCAAAAGGGCGAGGTGCTTTTTAAGCTCGACCCGGTTCGTTACCAGGCGCGAGTTGACAGACTTCAGGCTGACCTGATGACGGCGACGCATAATATAAAGACGCTGCGTGCGCAGCTCACTGAAGCGCAGGCCAACACCACCCAGGTTTCAGCGGAGCGCGACCGTCTGTTTAAAAATTATCAACGTTACTTGAAAGGCAGCCAGGCGGCGGTGAATCCGTTCTCGGAACGTGACATCGACGATGCGCGGCAAAATTTCCTCGCGCAGGATGCGCTGGTGAAAGGCTCGGTGGCGGAGCAGGCGCAGATCCAGAGCCAGCTCGACAGTATGGTTAACGGCGAGCAATCGCAGATTGTGAGCTTAAGAGCGCAACTTACTGAAGCAAAATATAACCTTGAGCAGACTGTCATTCGCGCGCCGAGCAATGGCTACGTTACTCAGGTACTGATCCGCCCAGGTACATACGCAGCTGCCTTGCCGCTGCGTCCGGTGATGGTCTTCATCCCCGAGCAAAAACGGCAAATTGTCGCCCAATTTCGGCAAAACTCGCTGTTACGTCTGAAACCTGGCGATGATGCGGAAGTGGTGTTTAACGCGCTACCTGGGCAGGTGTTTCACGGCAAACTGACTAGTATTTTACCTGTCGTGCCAGGCGGTTCTTATCAGGCGCAGGGGGTATTGCAATCATTAACGGTCGTGCCCGGCACGGACGGTGTGCTGGGAACCATTGAACTGGACCCTAACGATGATATCGATGCCTTACCCGACGGCATCTACGCCCAGGTGGCGGTTTACTCCGACCATTTCAGCCATGTTTCGGTGATGCGGAAAGTGCTGCTAAGAATGACCAGCTGGATGCATTATCTTTATTTGGATCATTGA", 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"GeneID:948109" - ], - [ - "gene_synonym", - "NP_418055.1" - ], - [ - "gene_synonym", - "ECK3587" - ], - [ - "gene_synonym", - "ASAP:ABE-0011754" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32108" - ], - [ - "gene_synonym", - "EcoGene:EG11765" - ] - ], - "dna_sequence": "ATGTTTCTAAACTATTTCGCGTTGGGAGTGCTGATCTTCGTCTTTCTGGTGATTTTTTATGGAATCATCGCGATACATGACATCCCTTATCTGATTGCCAAAAAGCGCAACCATCCCCATGCCGACGCTATTCATACGGCGGGCTGGGTGAGCCTGTTTACTCTGCATGTTATCTGGCCGTTTCTGTGGATCTGGGCGACGCTCTATCAACCGGAGCGTGGCTGGGGTATGCAGTCACATGTTGCGTCGCAGGAGAAAGCGACTGACCCGGAAATCGCCGCACTTTCTGACCGAATTTCCCGGCTGGAGCATCAACTCGCCGCCGAGAAAAAGACTGACTATTCCACGTTCCCGGAGATCTAA", - "dna_sequence_length": 363, - "functions": [ - "DUF3302 family inner membrane protein" - ], - "id": "CDS_3544", - "location": [ - [ - "NC_000913", - 3771744, - "-", - 363 - ] - ], - "md5": "6e643eea357a1441e6fb14c75c6e6e82", - "parent_gene": "", - "protein_md5": "76ef4b0973c993f7f7c8a2ef5491fffa", - "protein_translation": "MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAIHTAGWVSLFTLHVIWPFLWIWATLYQPERGWGMQSHVASQEKATDPEIAALSDRISRLEHQLAAEKKTDYSTFPEI", - "protein_translation_length": 120, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3588" - ], - [ - "gene_synonym", - "JW3573" - ], - [ - "gene_synonym", - "b3599" - ], - [ - "gene_synonym", - "GI:16131470" - ], - [ - "gene_synonym", - "ASAP:ABE-0011761" - ], - [ - "gene_synonym", - "EcoGene:EG10615" - ], - [ - "gene_synonym", - "GeneID:948118" - ], - [ - "gene_synonym", - "mtlC" - ], - [ - "gene_synonym", - "NP_418056.1" - ], - [ - "gene_synonym", - "mtlA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00550" - ] - ], - "dna_sequence": "ATGTCATCCGATATTAAGATCAAAGTGCAAAGCTTTGGTCGTTTCCTCAGCAACATGGTGATGCCAAATATCGGCGCGTTTATCGCGTGGGGTATCATCACCGCGTTATTTATTCCAACAGGGTGGTTACCGAACGAGACGCTGGCGAAGCTGGTCGGGCCGATGATCACTTATCTCCTGCCGCTGCTGATCGGTTATACCGGTGGTAAGCTGGTAGGCGGCGAACGTGGCGGCGTAGTCGGTGCCATCACCACCATGGGCGTTATCGTCGGCGCAGACATGCCGATGTTCCTCGGTTCTATGATTGCAGGTCCGCTGGGCGGCTGGTGCATTAAGCACTTCGACCGCTGGGTAGACGGTAAGATCAAATCCGGTTTTGAGATGCTGGTGAATAACTTCTCCGCAGGCATCATCGGGATGATCCTCGCTATTCTGGCATTCCTCGGCATTGGCCCGATTGTTGAAGCCCTGTCCAAAATGCTGGCTGCGGGCGTTAACTTCATGGTTGTCCATGACATGCTGCCGCTGGCGTCTATCTTTGTTGAACCGGCGAAAATCCTGTTCCTCAACAACGCCATTAACCACGGTATCTTCTCGCCGCTGGGTATTCAGCAGTCCCATGAACTGGGTAAATCAATCTTCTTCCTGATTGAAGCTAACCCAGGTCCAGGTATGGGCGTGCTGCTGGCGTACATGTTCTTTGGTCGTGGTAGCGCTAAACAGTCTGCGGGCGGTGCGGCAATCATCCACTTCCTGGGGGGTATCCACGAAATCTACTTCCCGTATGTGCTGATGAATCCGCGTCTGATCCTCGCAGTCATCCTCGGCGGTATGACTGGCGTGTTCACGCTGACTATCCTGGGCGGTGGTCTGGTTTCTCCGGCATCTCCGGGTTCTATCCTTGCTGTACTGGCGATGACACCAAAAGGTGCTTACTTCGCTAACATCGCGGGTGTGTGTGCGGCGATGGCTGTCTCCTTCGTTGTCTCTGCTATTTTGCTGAAAACCAGCAAAGTGAAAGAAGAAGATGATATTGAAGCAGCAACTCGTCGTATGCAGGACATGAAAGCTGAGTCTAAAGGCGCATCTCCGCTGTCTGCTGGCGATGTGACTAACGACCTGAGCCACGTACGTAAAATCATCGTTGCCTGTGACGCCGGTATGGGTTCCAGTGCGATGGGCGCAGGCGTTCTGCGTAAGAAAATTCAGGATGCAGGTCTGTCGCAGATTTCTGTTACTAACAGCGCGATCAACAACCTGCCGCCAGATGTGGACCTCGTCATCACTCACCGTGACCTGACCGAACGCGCTATGCGCCAGGTTCCGCAGGCACAGCATATTTCGCTGACCAACTTCCTCGACAGCGGCCTGTACACCAGCCTGACCGAACGTCTGGTTGCTGCCCAACGCCACACGGCAAACGAAGAGAAAGTAAAAGACAGCCTGAAAGACAGCTTTGACGATTCCAGTGCTAACCTGTTCAAGCTAGGCGCGGAGAACATCTTCCTCGGTCGCAAAGCGGCAACCAAAGAAGAAGCGATTCGTTTTGCTGGCGAGCAGCTGGTGAAAGGCGGTTACGTTGAGCCGGAATACGTTCAGGCGATGCTGGATCGTGAAAAACTGACCCCGACTTATCTGGGTGAGTCTATCGCGGTGCCACACGGTACGGTTGAAGCGAAAGATCGCGTACTGAAAACGGGCGTCGTGTTCTGCCAGTACCCGGAAGGCGTGCGCTTCGGTGAAGAAGAAGATGACATTGCCCGTCTGGTGATTGGTATTGCTGCCCGTAACAACGAGCACATTCAGGTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAA", 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"protein_translation_length": 637, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3589" - ], - [ - "gene_synonym", - "JW3574" - ], - [ - "gene_synonym", - "GeneID:948117" - ], - [ - "gene_synonym", - "GI:16131471" - ], - [ - "gene_synonym", - "b3600" - ], - [ - "gene_synonym", - "EcoGene:EG10616" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09424" - ], - [ - "gene_synonym", - "ASAP:ABE-0011767" - ], - [ - "gene_synonym", - "NP_418057.1" - ], - [ - "gene_synonym", - "mtlD" - ] - ], - "dna_sequence": "ATGAAAGCATTACATTTTGGCGCAGGTAATATCGGTCGTGGCTTTATCGGTAAACTGCTGGCAGACGCGGGTATCCAACTGACGTTTGCCGATGTCAATCAGGTGGTACTTGATGCCCTGAATGCCCGTCATAGCTATCAGGTACATGTGGTTGGTGAAACCGAGCAGGTAGATACCGTTTCCGGCGTCAATGCTGTCAGCAGCATTGGTGATGATGTCGTTGATCTGATTGCTCAGGTTGATTTAGTCACTACCGCCGTTGGCCCGGTTGTGCTGGAACGTATTGCTCCGGCAATCGCCAAAGGGCAGGTGAAACGTAAAGAACAAGGTAATGAATCCCCGCTGAACATCATCGCCTGTGAAAACATGGTACGCGGTACCACGCAGCTGAAAGGCCATGTGATGAACGCCCTGCCGGAAGACGCCAAAGCGTGGGTAGAAGAACACGTTGGCTTTGTCGATTCCGCCGTTGACCGCATCGTACCGCCTTCGGCTTCGGCAACTAACGATCCGCTGGAAGTGACGGTAGAAACCTTCAGCGAATGGATTGTCGATAAAACGCAGTTCAAAGGCGCACTGCCGAACATCCCAGGCATGGAGTTAACCGACAACCTGATGGCATTTGTCGAACGTAAACTCTTCACCCTGAACACGGGTCATGCTATAACCGCGTACCTCGGAAAACTGGCCGGTCATCAGACCATTCGTGACGCGATTCTCGACGAGAAAATCCGCGCGGTGGTAAAAGGTGCGATGGAAGAAAGTGGTGCAGTATTGATCAAGCGCTACGGCTTTGACGCTGACAAGCATGCGGCGTACATCCAGAAAATTCTCGGCCGTTTTGAGAACCCGTATCTGAAAGATGATGTAGAGCGCGTAGGCCGTCAGCCACTGCGTAAACTGAGTGCTGGCGACCGTCTGATCAAGCCACTGCTCGGTACGCTGGAATATGGTCTGCCACATAAAAACCTGATTGAAGGTATTGCCGCTGCAATGCACTTCCGCAGTGAAGATGATCCGCAGGCTCAGGAACTGGCAGCACTGATCGCTGACAAAGGTCCGCAGGCGGCGCTGGCACAGATTTCCGGTCTTGATGCCAACAGCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAA", 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"ECK3590" - ], - [ - "gene_synonym", - "GI:16131472" - ], - [ - "gene_synonym", - "b3601" - ], - [ - "gene_synonym", - "NP_418058.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011769" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF10" - ] - ], - "dna_sequence": "ATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTAAAACTCATTTACGGGTTGGGCGTCATTAACCGCCAGGAATACGAAGATGCGGAACTGCTGATGGCATTGCGTGAAGAGCTAAATCACGACGGCAACGAGTACGCCTTTACCGACGACGAAATCCTTGGACCCTTTGGTGAACTGCACTGCGTGGCGGCGTTACCACCGCCGCCACAGTTTGAACCAGCAGACTCCAGTTTGTATGCAATGCAAATTCAGCGCTATCAACAGGCTGTGCGATCAACAATGGTCCTTTCACTGACTGAGCTGATTTCCAAAATCAGCTTAAAAAAAGCCTTTCAAAAGTAA", - "dna_sequence_length": 588, - "functions": [ - "mannitol operon repressor" - ], - "id": "CDS_3547", - "location": [ - [ - "NC_000913", - 3775572, - "+", - 588 - ] - ], - "md5": "eb3e96881fd453f78f855172940903c9", - "parent_gene": "", - "protein_md5": "c6deb7847a6f01c74734deeba375556a", - "protein_translation": "MVDQAQDTLRPNNRLSDMQATMEQTQAFENRVLERLNAGKTVRSFLITAVELLTEAVNLLVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVINRQEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVAALPPPPQFEPADSSLYAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK", - "protein_translation_length": 195, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3576" - ], - [ - "gene_synonym", - "ASAP:ABE-0285075" - ], - [ - "gene_synonym", - "EcoGene:EG14397" - ], - [ - "gene_synonym", - "b4554" - ], - [ - "gene_synonym", - "GeneID:1450299" - ], - [ - "gene_synonym", - "ECK3591" - ], - [ - "gene_synonym", - "YP_588470.1" - ], - [ - "gene_synonym", - "GI:94541127" - ], - [ - "gene_synonym", - "yibT" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q2M7R5" - ] - ], - "dna_sequence": "ATGGGCAAATTAGGTGAAAACGTTCCGCTTCTTATCGATAAAGCCGTAGATTTCATGGCATCAAGCCAGGCGTTCCGGGAGTATCTGAAAAAACTTCCTCCCCGTAACGCGATTCCGTCCGGAATACCCGATGAAAGCGTGCCGTTATATCTACAACGTCTGGAGTATTATCGTCGGCTTTATCGGCCGAAGCAGGTAGAGGGGCAGTAA", - "dna_sequence_length": 210, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_3548", - "location": [ - [ - "NC_000913", - 3776380, - "-", - 210 - ] - ], - "md5": "947e70685996e539fe6fe97f99f9170f", - "parent_gene": "", - "protein_md5": "9e0251c1867e1ba3e9df366e7925c3bc", - "protein_translation": "MGKLGENVPLLIDKAVDFMASSQAFREYLKKLPPRNAIPSGIPDESVPLYLQRLEYYRRLYRPKQVEGQ", - "protein_translation_length": 69, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11964" - ], - [ - "gene_synonym", - "JW3577" - ], - [ - "gene_synonym", - "GeneID:948115" - ], - [ - "gene_synonym", - "yibL" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADK8" - ], - [ - "gene_synonym", - "ECK3592" - ], - [ - "gene_synonym", - "NP_418059.1" - ], - [ - "gene_synonym", - "GI:16131473" - ], - [ - "gene_synonym", - "ASAP:ABE-0011773" - ], - [ - "gene_synonym", - "b3602" - ] - ], - "dna_sequence": "ATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTGAAGCCGCAGACAAATATGCCGAGCTGGAAAAAGAGAAAGCCACGCTGGAAGCAGAAATTGCTCGCCTGCGTGAAGTTCATAGCCAAAAACTGAGTAAAGAAGCACAGAAGCTGATGAAGATGCCATTCCAGCGCGCAATTACCAAAAAAGAGCAGGCTGATATGGGCAAGCTGAAGAAAAGTGTTCGCGGACTGGTCGTTGTGCACCCAATGACCGCACTGGGCCGCGAAATGGGCCTGCAGGAGATGACTGGGTTTTCAAAGACCGCGTTTTAA", - "dna_sequence_length": 363, - "functions": [ - "ribosome-associated DUF2810 family protein" - ], - "id": "CDS_3549", - "location": [ - [ - "NC_000913", - 3776665, - "+", - 363 - ] - ], - "md5": "a263ac032c2714cfb1909807c3a4af0d", - "parent_gene": "", - "protein_md5": "acf1c175b982a03ecd877fb3c8e5bb5b", - "protein_translation": "MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQKLSKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTALGREMGLQEMTGFSKTAF", - "protein_translation_length": 120, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "lldP" - ], - [ - "gene_synonym", - "lct" - ], - [ - "gene_synonym", - "EcoGene:EG11961" - ], - [ - "gene_synonym", - "ECK3593" - ], - [ - "gene_synonym", - "GI:16131474" - ], - [ - "gene_synonym", - "b3603" - ], - [ - "gene_synonym", - "GeneID:948114" - ], - [ - "gene_synonym", - "JW3578" - ], - [ - "gene_synonym", - "ASAP:ABE-0011777" - ], - [ - "gene_synonym", - "NP_418060.1" - ], - [ - "gene_synonym", - "lctP" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33231" - ] - ], - "dna_sequence": "ATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAAGGATACGTCGCCGCCTCGTGGACGGTGGCAATCGCCCTTGCCGTGGCTTTGCTGTTCTATAAAATGCCGGTCGCTAACGCGCTGGCCTCGGTGGTTTATGGTTTCTTCTACGGGTTGTGGCCCATCGCGTGGATCATTATTGCAGCGGTGTTCGTCTATAAGATCTCGGTGAAAACCGGGCAGTTTGACATCATTCGCTCGTCTATTCTTTCGATAACCCCTGACCAGCGTCTGCAAATGCTGATCGTCGGTTTCTGTTTCGGCGCGTTCCTTGAAGGAGCCGCAGGCTTTGGCGCACCGGTAGCAATTACCGCCGCATTGCTGGTCGGCCTGGGTTTTAAACCGCTGTACGCCGCCGGGCTGTGCCTGATTGTTAACACCGCGCCAGTGGCATTTGGTGCGATGGGCATTCCAATCCTGGTTGCCGGACAGGTAACAGGTATCGACAGCTTTGAGATTGGTCAGATGGTGGGGCGGCAGCTACCGTTTATGACCATTATCGTGCTGTTCTGGATCATGGCGATTATGGACGGCTGGCGCGGTATCAAAGAGACGTGGCCTGCGGTCGTGGTTGCGGGCGGCTCGTTTGCCATCGCTCAGTACCTTAGCTCTAACTTCATTGGGCCGGAGCTGCCGGACATTATCTCTTCGCTGGTATCACTGCTCTGCCTGACGCTGTTCCTCAAACGCTGGCAGCCAGTGCGTGTATTCCGTTTTGGTGATTTGGGGGCGTCACAGGTTGATATGACGCTGGCCCACACCGGTTACACTGCGGGTCAGGTGTTACGTGCCTGGACACCGTTCCTGTTCCTGACAGCTACCGTAACACTGTGGAGTATCCCGCCGTTTAAAGCCCTGTTCGCATCGGGTGGCGCGCTGTATGAGTGGGTGATCAATATTCCGGTGCCGTACCTCGATAAACTGGTTGCCCGTATGCCGCCAGTGGTCAGCGAGGCTACAGCCTATGCCGCCGTGTTTAAGTTTGACTGGTTCTCTGCCACCGGCACCGCCATTCTGTTTGCTGCACTGCTCTCGATTGTCTGGCTGAAGATGAAACCGTCTGACGCTATCAGCACCTTCGGCAGCACGCTGAAAGAACTGGCTCTGCCCATCTACTCCATCGGTATGGTGCTGGCATTCGCCTTTATTTCGAACTATTCCGGACTGTCATCAACACTGGCGCTGGCACTGGCGCACACCGGTCATGCATTCACCTTCTTCTCGCCGTTCCTCGGCTGGCTGGGGGTATTCCTGACCGGGTCGGATACCTCATCTAACGCCCTGTTCGCCGCGCTGCAAGCCACCGCAGCACAACAAATTGGCGTCTCTGATCTGTTGCTGGTTGCCGCCAATACCACCGGTGGCGTCACCGGTAAGATGATCTCCCCGCAATCTATCGCTATCGCCTGTGCGGCGGTAGGCCTGGTGGGCAAAGAGTCTGATTTGTTCCGCTTTACTGTCAAACACAGCCTGATCTTCACCTGTATAGTGGGCGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAA", 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"gene_synonym", - "lldR" - ], - [ - "gene_synonym", - "GI:16131475" - ], - [ - "gene_synonym", - "EcoGene:EG11962" - ], - [ - "gene_synonym", - "NP_418061.1" - ], - [ - "gene_synonym", - "lct" - ], - [ - "gene_synonym", - "JW3579" - ], - [ - "gene_synonym", - "b3604" - ], - [ - "gene_synonym", - "lctR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACL7" - ], - [ - "gene_synonym", - "ECK3594" - ], - [ - "gene_synonym", - "ASAP:ABE-0011782" - ] - ], - "dna_sequence": "ATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCAGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATTGCCGAAGCCTCACATAACATCGTGCTGCTGCAAACCATGCGCGGTTTCTTCGATGTCCTGCAATCCTCAGTGAAGCATAGCCGTCAGCGGATGTATCTGGTGCCACCGGTTTTTTCACAACTGACCGAACAACATCAGGCTGTCATTGACGCCATTTTTGCCGGTGATGCTGACGGGGCGCGTAAAGCAATGATGGCGCACCTTAGTTTTGTTCACACCACCATGAAACGATTCGATGAAGATCAGGCTCGCCACGCACGGATTACCCGCCTGCCCGGTGAGCATAATGAGCATTCGAGGGAGAAAAACGCATGA", - "dna_sequence_length": 777, - "functions": [ - "dual role activator/repressor for lldPRD operon" - ], - "id": "CDS_3551", - "location": [ - [ - "NC_000913", - 3779054, - "+", - 777 - ] - ], - "md5": "0f5dd1abced6cf342f53be3e849874b9", - "parent_gene": "", - "protein_md5": "ea9fc0943b77b21ed777b870e6597352", - "protein_translation": "MIVLPRRLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGVLLSRRGGGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFDILEARYAIEASTAWHAAMRATPGDKEKIQLCFEATLSEDPDIASQADVRFHLAIAEASHNIVLLQTMRGFFDVLQSSVKHSRQRMYLVPPVFSQLTEQHQAVIDAIFAGDADGARKAMMAHLSFVHTTMKRFDEDQARHARITRLPGEHNEHSREKNA", - "protein_translation_length": 258, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "lct" - ], - [ - "gene_synonym", - "lctD" - ], - [ - "gene_synonym", - "EcoGene:EG11963" - ], - [ - "gene_synonym", - "GI:16131476" - ], - [ - "gene_synonym", - "JW3580" - ], - [ - "gene_synonym", - "GeneID:948121" - ], - [ - "gene_synonym", - "ECK3595" - ], - [ - "gene_synonym", - "b3605" - ], - [ - "gene_synonym", - "lldD" - ], - [ - "gene_synonym", - "ASAP:ABE-0011784" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33232" - ], - [ - "gene_synonym", - "NP_418062.1" - ] - ], - "dna_sequence": "ATGATTATTTCCGCAGCCAGCGATTATCGCGCCGCAGCGCAACGCATTCTGCCGCCGTTCCTGTTCCACTATATGGATGGTGGTGCATATTCTGAATACACGCTGCGCCGCAACGTGGAAGATTTGTCAGAAGTGGCGCTGCGCCAGCGTATTCTGAAAAACATGTCCGACTTAAGCCTGGAAACGACGCTGTTTAATGAGAAATTGTCGATGCCGGTGGCACTGGCTCCGGTGGGTTTGTGTGGCATGTATGCGCGTCGTGGCGAAGTTCAGGCAGCCAAAGCGGCGGACGCGCATGGTATTCCGTTTACTCTCTCGACGGTTTCCGTTTGCCCGATTGAAGAAGTCGCGCCAGCCATCAAGCGCCCAATGTGGTTCCAGCTTTATGTACTGCGCGATCGCGGCTTTATGCGTAACGCGCTGGAGCGAGCAAAAGCAGCGGGTTGTTCGACGCTGGTTTTCACCGTGGATATGCCGACACCGGGCGCACGCTACCGTGATGCGCATTCAGGTATGAGCGGCCCGAACGCGGCAATGCGCCGCTACTTGCAAGCGGTGACACATCCGCAATGGGCGTGGGATGTGGGCCTGAACGGTCGTCCACATGATTTAGGTAATATCTCAGCTTATCTCGGCAAACCGACCGGACTGGAAGATTACATCGGCTGGCTGGGGAATAACTTCGATCCGTCCATCTCATGGAAAGACCTTGAATGGATCCGCGATTTCTGGGATGGCCCGATGGTGATCAAAGGGATCCTCGATCCGGAAGATGCGCGCGATGCAGTACGTTTTGGTGCTGATGGAATTGTGGTTTCTAACCACGGTGGCCGCCAGCTGGACGGTGTACTCTCTTCCGCCCGTGCACTGCCTGCTATTGCAGATGCGGTGAAAGGTGATATAGCCATTCTGGCGGATAGCGGAATTCGTAACGGGCTTGATGTCGTGCGTATGATTGCGCTCGGTGCCGACACCGTACTGCTGGGTCGTGCTTTCTTGTATGCGCTGGCAACAGCGGGCCAGGCGGGTGTAGCTAACCTGCTAAATCTGATCGAAAAAGAGATGAAAGTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAG", - "dna_sequence_length": 1191, - "functions": [ - "L-lactate dehydrogenase, FMN-linked" - ], - "id": "CDS_3552", - "location": [ - [ - "NC_000913", - 3779827, - "+", - 1191 - ] - ], - "md5": "3111c75769d71f4305329bcc31dccadb", - "parent_gene": "", - "protein_md5": "3c610efa1616d180507e6fc253961e25", - "protein_translation": "MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELPAALAPMAKGNAA", - "protein_translation_length": 396, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yibK" - ], - [ - "gene_synonym", - "GI:16131477" - ], - [ - "gene_synonym", - "JW3581" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGJ7" - ], - [ - "gene_synonym", - "ECK3596" - ], - [ - "gene_synonym", - "GeneID:948119" - ], - [ - "gene_synonym", - "b3606" - ], - [ - "gene_synonym", - "NP_418063.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011790" - ], - [ - "gene_synonym", - "EcoGene:EG11888" - ], - [ - "gene_synonym", - "trmL" - ] - ], - "dna_sequence": "ATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATCATCGAACCGATGGGATTTGCCTGGGACGATAAGCGCCTGCGCCGCGCGGGGCTGGACTATCACGAGTTTACCGCCGTTACGCGTCATCATGACTATCGCGCGTTCCTCGAAGCAGAAAATCCCCAGCGCCTGTTCGCCCTCACCACGAAAGGTACACCTGCTCACAGCGCCGTAAGCTATCAGGATGGCGATTATCTGATGTTCGGCCCGGAAACACGCGGCCTGCCAGCGAGCATTCTTGATGCCCTGCCCGCTGAACAAAAAATTCGCATTCCGATGGTGCCGGACAGCCGCAGCATGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAG", - "dna_sequence_length": 474, - "functions": [ - "tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent" - ], - "id": "CDS_3553", - "location": [ - [ - "NC_000913", - 3781215, - "+", - 474 - ] - ], - "md5": "04737e5628adc16042ead6aa532cf23c", - "parent_gene": "", - "protein_md5": "252fd291be7ca9643cd0014f9def70e3", - "protein_translation": "MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRLRRAGLDYHEFTAVTRHHDYRAFLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPETRGLPASILDALPAEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGAVLRD", - "protein_translation_length": 157, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418064.1" - ], - [ - "gene_synonym", - "GeneID:948126" - ], - [ - "gene_synonym", - "GI:16131478" - ], - [ - "gene_synonym", - "cysE" - ], - [ - "gene_synonym", - "JW3582" - ], - [ - "gene_synonym", - "ECK3597" - ], - [ - "gene_synonym", - "b3607" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9D4" - ], - [ - "gene_synonym", - "ASAP:ABE-0011793" - ], - [ - "gene_synonym", - "EcoGene:EG10187" - ] - ], - "dna_sequence": "ATGTCGTGTGAAGAACTGGAAATTGTCTGGAACAATATTAAAGCCGAAGCCAGAACGCTGGCGGACTGTGAGCCAATGCTGGCCAGTTTTTACCACGCGACGCTACTCAAGCACGAAAACCTTGGCAGTGCACTGAGCTACATGCTGGCGAACAAGCTGTCATCGCCAATTATGCCTGCTATTGCTATCCGTGAAGTGGTGGAAGAAGCCTACGCCGCTGACCCGGAAATGATCGCCTCTGCGGCCTGTGATATTCAGGCGGTGCGTACCCGCGACCCGGCAGTCGATAAATACTCAACCCCGTTGTTATACCTGAAGGGTTTTCATGCCTTGCAGGCCTATCGCATCGGTCACTGGTTGTGGAATCAGGGGCGTCGCGCACTGGCAATCTTTCTGCAAAACCAGGTTTCTGTGACGTTCCAGGTCGATATTCACCCGGCAGCAAAAATTGGTCGCGGTATCATGCTTGACCACGCGACAGGCATCGTCGTTGGTGAAACGGCGGTGATTGAAAACGACGTATCGATTCTGCAATCTGTGACGCTTGGCGGTACGGGTAAATCTGGTGGTGACCGTCACCCGAAAATTCGTGAAGGTGTGATGATTGGCGCGGGCGCGAAAATCCTCGGCAATATTGAAGTTGGGCGCGGCGCGAAGATTGGCGCAGGTTCCGTGGTGCTGCAACCGGTGCCGCCGCATACCACCGCCGCTGGCGTTCCGGCTCGTATTGTCGGTAAACCAGACAGCGATAAGCCATCAATGGATATGGACCAGCATTTCAACGGTATTAACCATACATTTGAGTATGGGGATGGGATCTAA", - "dna_sequence_length": 822, - "functions": [ - "serine acetyltransferase" - ], - "id": "CDS_3554", - "location": [ - [ - "NC_000913", - 3782562, - "-", - 822 - ] - ], - "md5": "b6a8b1a9c595a01f41e73aafe036e7d6", - "parent_gene": "", - "protein_md5": "dbf5255db46feff6ef72b63754671791", - "protein_translation": "MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSALSYMLANKLSSPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI", - "protein_translation_length": 273, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG20091" - ], - [ - "gene_synonym", - "ECK3598" - ], - [ - "gene_synonym", - "GeneID:948125" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6S7" - ], - [ - "gene_synonym", - "GI:16131479" - ], - [ - "gene_synonym", - "JW3583" - ], - [ - "gene_synonym", - "NP_418065.1" - ], - [ - "gene_synonym", - "gpsA" - ], - [ - "gene_synonym", - "b3608" - ], - [ - "gene_synonym", - "ASAP:ABE-0011795" - ] - ], - "dna_sequence": "ATGAACCAACGTAATGCTTCAATGACTGTGATCGGTGCCGGCTCGTACGGCACCGCTCTTGCCATCACCCTGGCAAGAAATGGCCACGAGGTTGTCCTCTGGGGCCATGACCCTGAACATATCGCAACGCTTGAACGCGACCGCTGTAACGCCGCGTTTCTCCCCGATGTGCCTTTTCCCGATACGCTCCATCTTGAAAGCGATCTCGCCACTGCGCTGGCAGCCAGCCGTAATATTCTCGTCGTCGTACCCAGCCATGTCTTTGGTGAAGTGCTGCGCCAGATTAAACCACTGATGCGTCCTGATGCGCGTCTGGTGTGGGCGACCAAAGGGCTGGAAGCGGAAACCGGACGTCTGTTACAGGACGTGGCGCGTGAGGCCTTAGGCGATCAAATTCCGCTGGCGGTTATCTCTGGCCCAACGTTTGCGAAAGAACTGGCGGCAGGTTTACCGACAGCTATTTCGCTGGCCTCGACCGATCAGACCTTTGCCGATGATCTCCAGCAGCTGCTGCACTGCGGCAAAAGTTTCCGCGTTTACAGCAATCCGGATTTCATTGGCGTGCAGCTTGGCGGCGCGGTGAAAAACGTTATTGCCATTGGTGCGGGGATGTCCGACGGTATCGGTTTTGGTGCGAATGCGCGTACGGCGCTGATCACCCGTGGGCTGGCTGAAATGTCGCGTCTTGGTGCGGCGCTGGGTGCCGACCCTGCCACCTTTATGGGCATGGCGGGGCTTGGCGATCTGGTGCTTACCTGTACCGACAACCAGTCGCGTAACCGCCGTTTTGGCATGATGCTCGGTCAGGGCATGGATGTACAAAGCGCGCAGGAGAAGATTGGTCAGGTGGTGGAAGGCTACCGCAATACGAAAGAAGTCCGCGAACTGGCGCATCGCTTCGGCGTTGAAATGCCAATAACCGAGGAAATTTATCAAGTATTATATTGCGGAAAAAACGCGCGCGAGGCAGCATTGACTTTACTAGGTCGTGCACGCAAGGACGAGCGCAGCAGCCACTAA", - "dna_sequence_length": 1020, - "functions": [ - "glycerol-3-phosphate dehydrogenase (NAD+)" - ], - "id": "CDS_3555", - "location": [ - [ - "NC_000913", - 3783661, - "-", - 1020 - ] - ], - "md5": "56ffc9f309382f063048e900c11e8f6a", - "parent_gene": "", - "protein_md5": "1a8711b9d137a136af7ca5a23ee78b64", - "protein_translation": "MNQRNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATLERDRCNAAFLPDVPFPDTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMRPDARLVWATKGLEAETGRLLQDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTDQTFADDLQQLLHCGKSFRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMSRLGAALGADPATFMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSAQEKIGQVVEGYRNTKEVRELAHRFGVEMPITEEIYQVLYCGKNAREAALTLLGRARKDERSSH", - "protein_translation_length": 339, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948123" - ], - [ - "gene_synonym", - "ECK3599" - ], - [ - "gene_synonym", - "secB" - ], - [ - "gene_synonym", - "EcoGene:EG10937" - ], - [ - "gene_synonym", - "JW3584" - ], - [ - "gene_synonym", - "NP_418066.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011798" - ], - [ - "gene_synonym", - "GI:16131480" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG86" - ], - [ - "gene_synonym", - "b3609" - ] - ], - "dna_sequence": "ATGTCAGAACAAAACAACACTGAAATGACTTTCCAGATCCAACGTATTTATACCAAGGATATCTCTTTCGAAGCGCCGAACGCGCCGCACGTTTTCCAGAAAGATTGGCAACCAGAAGTTAAACTTGATCTGGATACGGCATCTTCCCAACTGGCAGATGACGTATACGAAGTGGTACTGCGTGTTACCGTAACGGCCTCTTTGGGCGAAGAAACCGCGTTCCTGTGTGAAGTTCAGCAGGGCGGTATTTTCTCCATCGCGGGTATCGAAGGCACCCAGATGGCGCATTGCCTGGGAGCATACTGCCCGAACATTCTGTTCCCGTATGCTCGTGAGTGCATCACCAGCATGGTATCCCGCGGTACATTCCCGCAACTGAACCTTGCGCCGGTTAACTTCGATGCGCTGTTCATGAACTATTTGCAGCAGCAGGCTGGCGAAGGTACTGAAGAACATCAGGATGCCTGA", - "dna_sequence_length": 468, - "functions": [ - "protein export chaperone" - ], - "id": "CDS_3556", - "location": [ - [ - "NC_000913", - 3784128, - "-", - 468 - ] - ], - "md5": "8f660245f910953dea96cda1c3d5d1a0", - "parent_gene": "", - "protein_md5": "cdf158db6f741adec4ab6e18b09bab2a", - "protein_translation": "MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDLDTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYCPNILFPYARECITSMVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA", - "protein_translation_length": 155, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "grxC" - ], - [ - "gene_synonym", - "GI:16131481" - ], - [ - "gene_synonym", - "ECK3600" - ], - [ - "gene_synonym", - "yibM" - ], - [ - "gene_synonym", - "b3610" - ], - [ - "gene_synonym", - "JW3585" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC62" - ], - [ - "gene_synonym", - "ASAP:ABE-0011801" - ], - [ - "gene_synonym", - "NP_418067.1" - ], - [ - "gene_synonym", - "GeneID:948132" - ], - [ - "gene_synonym", - "EcoGene:EG12294" - ] - ], - "dna_sequence": "ATGGCCAATGTTGAAATCTATACCAAAGAAACCTGCCCGTATTGCCATCGTGCAAAAGCACTGCTGAGCAGCAAGGGCGTGAGTTTCCAGGAGCTGCCGATCGATGGCAACGCCGCCAAGCGTGAAGAGATGATCAAACGCAGCGGTCGCACCACGGTTCCCCAGATTTTTATTGACGCACAGCACATTGGCGGCTGTGATGACTTGTATGCATTGGATGCACGTGGTGGACTGGATCCCCTGCTGAAATAA", - "dna_sequence_length": 252, - "functions": [ - "glutaredoxin 3" - ], - "id": "CDS_3557", - "location": [ - [ - "NC_000913", - 3784442, - "-", - 252 - ] - ], - "md5": "65bc2eba99b5a27e5446e459f1c36ffc", - "parent_gene": "", - "protein_md5": "e8c576ae9b777b43591ed7dca04bcfd9", - "protein_translation": "MANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALDARGGLDPLLK", - "protein_translation_length": 83, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131482" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG27" - ], - [ - "gene_synonym", - "yibN" - ], - [ - "gene_synonym", - "ASAP:ABE-0011805" - ], - [ - "gene_synonym", - "b3611" - ], - [ - "gene_synonym", - "JW3586" - ], - [ - "gene_synonym", - "GeneID:948131" - ], - [ - "gene_synonym", - "NP_418068.1" - ], - [ - "gene_synonym", - "ECK3601" - ], - [ - "gene_synonym", - "EcoGene:EG12295" - ] - ], - "dna_sequence": "ATGCAAGAAATTATGCAATTTGTTGGCCGTCATCCCATACTGAGTATCGCCTGGATCGCGTTACTGGTGGCGGTTCTTGTGACTACGTTTAAGAGCCTGACCTCGAAAGTGAAGGTGATTACTCGTGGTGAAGCTACGCGTCTGATCAACAAAGAAGACGCTGTGGTTGTGGATTTACGTCAGCGTGATGACTTCCGTAAAGGCCATATCGCAGGTTCTATTAATCTGTTGCCGAGCGAAATCAAAGCCAACAATGTTGGTGAGCTTGAGAAGCACAAAGACAAACCGGTTATCGTGGTAGACGGTTCTGGCATGCAGTGCCAGGAGCCTGCAAACGCACTGACGAAAGCTGGTTTTGCGCAAGTATTCGTGCTGAAAGAAGGCGTCGCTGGCTGGGCTGGCGAAAACTTGCCTTTGGTGCGCGGCAAATAA", - "dna_sequence_length": 432, - "functions": [ - "putative rhodanese-related sulfurtransferase" - ], - "id": "CDS_3558", - "location": [ - [ - "NC_000913", - 3785015, - "-", - 432 - ] - ], - "md5": "3585b942fee284102f9d8b39c68e8502", - "parent_gene": "", - "protein_md5": "f93f64fdf3f900b3f6a70f31ea436868", - "protein_translation": "MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGEATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDGSGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK", - "protein_translation_length": 143, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131483" - ], - [ - "gene_synonym", - "gpmC" - ], - [ - "gene_synonym", - "yibO" - ], - [ - "gene_synonym", - "b3612" - ], - [ - "gene_synonym", - "gpmI" - ], - [ - "gene_synonym", - "JW3587" - ], - [ - "gene_synonym", - "ASAP:ABE-0011818" - ], - [ - "gene_synonym", - "gpmM" - ], - [ - "gene_synonym", - "NP_418069.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37689" - ], - [ - "gene_synonym", - "pgmI" - ], - [ - "gene_synonym", - "ECK3602" - ], - [ - "gene_synonym", - "GeneID:948130" - ], - [ - "gene_synonym", - "EcoGene:EG12296" - ] - ], - "dna_sequence": "ATGTTGGTTTCTAAAAAACCTATGGTACTGGTGATTCTGGATGGCTATGGCTATCGCGAAGAACAGCAGGATAACGCCATTTTTAGTGCTAAAACCCCGGTAATGGATGCACTGTGGGCCAATCGTCCGCATACCCTAATCGACGCTTCCGGTCTGGAAGTCGGTCTGCCTGACCGTCAGATGGGTAACTCCGAAGTAGGCCACGTTAACCTGGGTGCCGGCCGCATCGTGTATCAGGACCTGACTCGTCTGGACGTTGAAATCAAAGATCGCGCTTTCTTTGCTAATCCGGTGCTGACTGGCGCGGTAGATAAAGCGAAAAACGCAGGCAAAGCGGTACACATTATGGGTCTGCTCTCCGCAGGCGGCGTACACAGCCACGAAGATCACATCATGGCGATGGTAGAACTGGCAGCTGAACGCGGCGCAGAAAAAATCTACCTGCACGCATTCCTTGACGGTCGCGACACTCCGCCGCGCAGTGCTGAATCCTCGCTGAAAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATGGACCGCGATAACCGTTGGGATCGCGTAGAAAAAGCTTATGACCTGCTGACTCTGGCGCAGGGCGAGTTCCAGGCCGATACCGCCGTTGCTGGTTTGCAGGCTGCTTATGCTCGCGACGAAAATGATGAATTCGTGAAAGCGACCGTTATCCGTGCTGAAGGTCAGCCAGACGCGGCAATGGAAGACGGCGATGCACTGATTTTCATGAACTTCCGTGCTGACCGCGCGCGTGAAATCACTCGTGCTTTCGTGAACGCTGATTTCGATGGCTTCGCGCGTAAGAAAGTGGTTAACGTCGATTTCGTGATGCTGACCGAATACGCCGCTGACATCAAAACTGCGGTTGCTTACCCACCCGCTTCCCTGGTTAACACCTTCGGCGAGTGGATGGCGAAAAACGACAAAACTCAGTTGCGTATTTCCGAAACCGAAAAATATGCCCACGTTACTTTCTTCTTCAACGGTGGCGTAGAAGAGTCGTTCAAAGGCGAAGATCGCATTCTGATCAACTCACCGAAAGTGGCTACCTACGATCTGCAACCGGAAATGAGCTCCGCAGAGCTGACCGAAAAACTGGTTGCGGCCATCAAGAGCGGCAAATACGACACCATCATCTGTAACTATCCGAACGGCGACATGGTAGGTCACACCGGGGTGATGGAAGCGGCGGTTAAAGCGGTTGAAGCGCTGGATCACTGCGTGGAAGAAGTCGCGAAAGCGGTTGAGTCCGTGGGTGGACAACTGCTGATCACCGCTGACCACGGTAACGCTGAGCAGATGCGCGATCCGGCAACGGGTCAGGCACACACGGCACACACCAACCTGCCAGTTCCGCTGATTTACGTTGGTGATAAGAACGTGAAAGCGGTTGAAGGCGGCAAACTTTCTGACATCGCGCCGACCATGTTGTCGCTGATGGGTATGGAAATCCCGCAAGAGATGACTGGTAAGCCGCTGTTCATCGTGGAATAA", 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"NP_418070.6" - ], - [ - "gene_synonym", - "yibP" - ], - [ - "gene_synonym", - "b3613" - ], - [ - "gene_synonym", - "GI:162135913" - ], - [ - "gene_synonym", - "GeneID:948129" - ], - [ - "gene_synonym", - "JW5646" - ], - [ - "gene_synonym", - "ECK3603" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37690" - ], - [ - "gene_synonym", - "envC" - ], - [ - "gene_synonym", - "ASAP:ABE-0011820" - ], - [ - "gene_synonym", - "EcoGene:EG12297" - ] - ], - "dna_sequence": "ATGACACGGGCCGTGAAACCGCGCAGGTTTGCAATCAGGCCCATCATCTACGCCAGCGTTCTTAGCGCTGGCGTATTGTTGTGCGCCTTTTCCGCCCACGCGGATGAGCGTGACCAACTCAAATCTATTCAGGCTGACATCGCCGCAAAAGAGCGCGCGGTACGCCAAAAGCAACAACAACGCGCAAGCCTGCTCGCACAATTGAAAAAGCAGGAAGAAGCGATCTCTGAAGCCACCCGTAAGCTGCGCGAAACGCAAAACACGCTCAATCAACTCAATAAACAGATTGATGAGATGAACGCGTCGATTGCCAAACTGGAGCAGCAAAAAGCCGCCCAGGAGCGCAGCCTCGCCGCACAACTGGATGCCGCATTCCGTCAGGGCGAGCATACCGGTATTCAGCTGATTCTCAGCGGTGAAGAAAGCCAGCGTGGACAGCGTTTACAGGCTTATTTCGGCTATCTCAACCAGGCGCGACAAGAAACCATTGCCCAGTTGAAGCAAACGCGTGAAGAAGTCGCCATGCAGCGTGCTGAACTGGAAGAGAAACAGAGCGAGCAACAAACGCTGTTATATGAGCAGCGCGCCCAACAGGCGAAACTGACTCAGGCGCTGAACGAGCGTAAAAAGACGCTGGCAGGGCTGGAGTCTTCCATCCAGCAAGGTCAGCAACAGTTGAGCGAGCTGCGCGCCAACGAATCCCGTCTGCGTAACAGCATTGCCCGTGCGGAAGCCGCGGCGAAAGCGCGTGCAGAACGAGAAGCACGTGAGGCCCAGGCGGTTCGCGACCGCCAGAAAGAAGCGACGCGCAAAGGCACCACCTACAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACGCTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGATTGCCGACGGTCGGGTGATTCTGGCTGACTGGCTGCAAGGCTACGGTCTGGTGGTGGTGGTTGAGCATGGTAAAGGCGACATGAGTCTTTACGGCTATAATCAGAGCGCACTGGTGAGCGTTGGTTCGCAGGTTCGCGCGGGCCAGCCGATTGCACTGGTGGGCAGCAGTGGCGGTCAGGGTCGGCCTTCACTCTATTTCGAAATTCGCCGCCAGGGTCAGGCGGTCAATCCACAGCCGTGGTTGGGAAGATAA", - "dna_sequence_length": 1260, - "functions": [ - "activator of AmiB,C murein hydrolases, septal ring factor" - ], - "id": "CDS_3560", - "location": [ - [ - "NC_000913", - 3786838, - "+", - 1260 - ] - ], - "md5": "ddd666ab573a0d18535f3000e7b72505", - "parent_gene": "", - "protein_md5": "17b0e09e68d23fd9b8cfcac95bda5fe2", - "protein_translation": "MTRAVKPRRFAIRPIIYASVLSAGVLLCAFSAHADERDQLKSIQADIAAKERAVRQKQQQRASLLAQLKKQEEAISEATRKLRETQNTLNQLNKQIDEMNASIAKLEQQKAAQERSLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYFGYLNQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKKTLAGLESSIQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAREAQAVRDRQKEATRKGTTYKPTESEKSLMSRTGGLGAPRGQAFWPVRGPTLHRYGEQLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGSQVRAGQPIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR", - "protein_translation_length": 419, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111621" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37691" - ], - [ - "gene_synonym", - "GeneID:948128" - ], - [ - "gene_synonym", - "ECK3604" - ], - [ - "gene_synonym", - "EcoGene:EG12298" - ], - [ - "gene_synonym", - "JW5645" - ], - [ - "gene_synonym", - "ASAP:ABE-0011824" - ], - [ - "gene_synonym", - "yibQ" - ], - [ - "gene_synonym", - "b3614" - ], - [ - "gene_synonym", - "NP_418071.4" - ] - ], - "dna_sequence": "TTGTTTCCATTTCGTCGTAACGTTCTTGCATTTGCCGCTCTGTTGGCGCTCTCCTCCCCCGTACTTGCTGGCAAACTTGCCATCGTCATTGATGATTTTGGGTATCGCCCGCACAACGAAAACCAGGTGCTGGCGATGCCTTCCGCTATCTCCGTCGCTGTATTACCCGATTCACCGCACGCCAGAGAGATGGCGACCAAAGCGCATAACAGCGGGCACGAAGTGTTGATTCATCTCCCGATGGCACCGTTGAGTAAACAGCCGCTGGAGAAAAATACGCTACGCCCGGAGATGAGCAGCGACGAAATTGAGCGCATTATTCGTAGTGCGGTCAATAACGTGCCCTATGCCGTGGGGATCAACAACCACATGGGCAGCAAGATGACCTCTAACCTGTTTGGTATGCAGAAAGTGATGCAGGCGCTGGAGCGTTACAATCTTTACTTCCTCGACAGCGTAACCATCGGTAATACCCAGGCGATGCGCGCCGCGCAAGGCACTGGCGTGAAGGTGATCAAACGGAAGGTATTCCTCGACGATTCGCAAAATGAAGCGGACATCCGTGTGCAATTTAATCGCGCAATTGACCTGGCGCGTCGCAACGGTTCGACCATTGCCATTGGGCATCCTCACCCTGCAACGGTACGCGTGTTGCAACAGATGGTTTATAACCTGCCGCCAGACATTACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGCAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATGCACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGCTTCTTTGAAGTATTAAGCGAAAGCATCAGCCAGAGCACGCTGATCGTTTACTTCCAGCATCAGTGGCAAGGCTGGGGCAAACAGCCCGAAGCGGCGAAGTTTAACGCTAGCGCAAATTAA", - "dna_sequence_length": 960, - "functions": [ - "putative polysaccharide deacetylase" - ], - "id": "CDS_3561", - "location": [ - [ - "NC_000913", - 3788101, - "+", - 960 - ] - ], - "md5": "0acf89485752989046b4ed298384c5b6", - "parent_gene": "", - "protein_md5": "f6b373a1f343429f4ab9a7b3b3e187a2", - "protein_translation": "MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPATVRVLQQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPVYANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN", - "protein_translation_length": 319, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131486" - ], - [ - "gene_synonym", - "JW3590" - ], - [ - "gene_synonym", - "waaH" - ], - [ - "gene_synonym", - "yibD" - ], - [ - "gene_synonym", - "ECK3605" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11290" - ], - [ - "gene_synonym", - "b3615" - ], - [ - "gene_synonym", - "NP_418072.1" - ], - [ - "gene_synonym", - "GeneID:948140" - ], - [ - "gene_synonym", - "ASAP:ABE-0011826" - ], - [ - "gene_synonym", - "EcoGene:EG11266" - ] - ], - "dna_sequence": "ATGATGAACAGCACCAATAAACTTAGTGTTATTATTCCGTTATATAATGCGGGCGATGATTTCCGCACTTGTATGGAATCTTTAATTACGCAAACCTGGACTGCTCTGGAAATCATTATTATTAACGATGGTTCAACGGATAATTCTGTTGAAATAGCAAAGTATTACGCAGAAAACTATCCGCACGTTCGTTTGTTGCATCAGGCGAATGCTGGCGCATCGGTGGCGCGTAATCGTGGGATTGAAGTGGCAACGGGCAAATATGTCGCTTTTGTCGATGCTGACGATGAAGTCTATCCCACCATGTACGAAACGCTGATGACCATGGCGTTAGAGGACGACCTCGACGTGGCGCAGTGCAACGCTGACTGGTGTTTTCGTGAAACGGGAGAAACCTGGCAATCCATCCCCACCGATCGCCTTCGCTCAACCGGCGTATTAACCGGCCCGGACTGGCTGCGGATGGGGCTTTCTTCGCGCCGTTGGACTCACGTTGTCTGGATGGGGGTTTATCGCCGTGATGTTATTGTTAAAAATAACATTAAATTTATTGCCGGATTACATCATCAGGATATTGTCTGGACAACAGAATTCATGTTTAACGCGCTGCGTGCGCGATATACCGAGCAATCATTATATAAATATTATCTGCATAATACGTCAGTGAGTCGGTTGCATAGACAAGGGAATAAAAACCTTAATTATCAACGTCACTATATTAAGATTACCCGCCTGCTGGAGAAATTAAATCGAAATTATGCCGACAAAATTATGATTTATCCGGAATTTCATCAGCAAATAACTTACGAGGCATTGCGTGTTTGCCATGCGGTGCGCAAAGAGCCGGATATTCTTACCCGCCAACGGATGATTGCCGAGATATTTACTTCCGGTATGTATAAGCGCCTGATTACCAATGTGCGCAGCGTGAAGGTCGGTTACCAGGCGTTACTGTGGTCTTTCCGCTTATGGCAATGGCGCGACAAAACGCGGTCGCACCATCGCATTACGCGTAGCGCCTTTAATTTGCGCTAG", - "dna_sequence_length": 1035, - "functions": [ - "LPS(HepIII)-glucuronic acid glycosyltransferase" - ], - "id": "CDS_3562", - "location": [ - [ - "NC_000913", - 3790081, - "-", - 1035 - ] - ], - "md5": "aef27157d810cec8d4f7cd714e718af0", - "parent_gene": "", - "protein_md5": "1e3e4c86db4c77c02d00ccbbb709a1de", - "protein_translation": "MMNSTNKLSVIIPLYNAGDDFRTCMESLITQTWTALEIIIINDGSTDNSVEIAKYYAENYPHVRLLHQANAGASVARNRGIEVATGKYVAFVDADDEVYPTMYETLMTMALEDDLDVAQCNADWCFRETGETWQSIPTDRLRSTGVLTGPDWLRMGLSSRRWTHVVWMGVYRRDVIVKNNIKFIAGLHHQDIVWTTEFMFNALRARYTEQSLYKYYLHNTSVSRLHRQGNKNLNYQRHYIKITRLLEKLNRNYADKIMIYPEFHQQITYEALRVCHAVRKEPDILTRQRMIAEIFTSGMYKRLITNVRSVKVGYQALLWSFRLWQWRDKTRSHHRITRSAFNLR", - "protein_translation_length": 344, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07913" - ], - [ - "gene_synonym", - "tdh" - ], - [ - "gene_synonym", - "GI:16131487" - ], - [ - "gene_synonym", - "NP_418073.1" - ], - [ - "gene_synonym", - "JW3591" - ], - [ - "gene_synonym", - "b3616" - ], - [ - "gene_synonym", - "GeneID:948139" - ], - [ - "gene_synonym", - "EcoGene:EG10993" - ], - [ - "gene_synonym", - "ECK3606" - ], - [ - "gene_synonym", - "ASAP:ABE-0011830" - ] - ], - "dna_sequence": "ATGAAAGCGTTATCCAAACTGAAAGCGGAAGAGGGCATCTGGATGACCGACGTTCCTGTACCGGAACTCGGGCATAACGATCTGCTGATTAAAATCCGTAAAACAGCCATCTGCGGGACTGACGTTCACATCTATAACTGGGATGAGTGGTCGCAAAAAACCATCCCGGTGCCGATGGTCGTGGGCCATGAATATGTCGGTGAAGTGGTAGGTATTGGTCAGGAAGTGAAAGGCTTCAAGATCGGCGATCGCGTTTCTGGCGAAGGCCATATCACCTGTGGTCATTGCCGCAACTGTCGTGGTGGTCGTACCCATTTGTGCCGCAACACGATAGGCGTTGGTGTTAATCGCCCGGGCTGCTTTGCCGAATATCTGGTGATCCCGGCATTCAACGCCTTCAAAATCCCCGACAATATTTCCGATGACTTAGCCGCAATTTTTGATCCCTTCGGTAACGCCGTGCATACCGCGCTGTCGTTTGATCTGGTGGGCGAAGATGTGCTGGTTTCTGGTGCAGGCCCGATTGGTATTATGGCAGCGGCGGTGGCGAAACACGTTGGTGCACGCAATGTGGTGATCACTGATGTTAACGAATACCGCCTTGAGCTGGCGCGTAAAATGGGTATCACCCGTGCGGTTAACGTCGCCAAAGAAAATCTCAATGACGTGATGGCGGAGTTAGGCATGACCGAAGGTTTTGATGTCGGTCTGGAAATGTCCGGTGCGCCGCCAGCGTTTCGTACCATGCTTGACACCATGAATCACGGCGGCCGTATTGCGATGCTGGGTATTCCGCCGTCTGATATGTCTATCGACTGGACCAAAGTGATCTTTAAAGGCTTGTTCATTAAAGGTATTTACGGTCGTGAGATGTTTGAAACCTGGTACAAGATGGCGGCGCTGATTCAGTCTGGCCTCGATCTTTCGCCGATCATTACCCATCGTTTCTCTATCGATGATTTCCAGAAGGGCTTTGACGCTATGCGTTCGGGCCAGTCCGGGAAAGTTATTCTGAGCTGGGATTAA", - "dna_sequence_length": 1026, - "functions": [ - "L-threonine 3-dehydrogenase, NAD(P)-binding" - ], - "id": "CDS_3563", - "location": [ - [ - "NC_000913", - 3791345, - "-", - 1026 - ] - ], - "md5": "ddcf07e8ad09a18bb852d33049443c0b", - "parent_gene": "", - "protein_md5": "12d3d05862c436a455609c62328231ec", - "protein_translation": "MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGGRTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLAAIFDPFGNAVHTALSFDLVGEDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKENLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKVIFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSGKVILSWD", - "protein_translation_length": 341, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10512" - ], - [ - "gene_synonym", - "NP_418074.1" - ], - [ - "gene_synonym", - "kbl" - ], - [ - "gene_synonym", - "b3617" - ], - [ - "gene_synonym", - "GI:16131488" - ], - [ - "gene_synonym", - "ECK3607" - ], - [ - "gene_synonym", - "JW3592" - ], - [ - "gene_synonym", - "GeneID:948138" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB77" - ], - [ - "gene_synonym", - "ASAP:ABE-0011832" - ] - ], - "dna_sequence": "ATGCGTGGAGAATTTTATCAGCAGTTAACCAACGATCTGGAAACCGCACGGGCGGAAGGGTTGTTTAAAGAAGAGCGCATTATTACGTCTGCGCAGCAAGCAGATATCACTGTGGCTGATGGAAGCCACGTCATTAACTTTTGTGCCAACAACTATCTCGGGCTGGCGAATCATCCTGATCTGATTGCGGCGGCAAAGGCGGGAATGGATTCTCACGGTTTCGGCATGGCTTCGGTGCGTTTTATTTGCGGCACTCAGGACAGCCATAAAGAGCTTGAACAAAAACTGGCGGCCTTCCTGGGGATGGAAGATGCGATTCTCTACTCTTCCTGCTTTGATGCTAACGGTGGCCTGTTTGAAACGCTTCTGGGTGCGGAAGACGCCATTATCTCCGACGCACTGAACCACGCGTCTATTATTGATGGTGTGCGTCTGTGCAAAGCTAAACGCTATCGCTATGCCAACAACGATATGCAGGAGCTGGAAGCACGTCTGAAAGAAGCGCGTGAAGCCGGTGCGCGTCATGTGCTGATCGCCACCGATGGTGTGTTCTCAATGGACGGCGTGATTGCCAACCTGAAGGGCGTTTGCGATCTGGCAGATAAATATGATGCCCTGGTGATGGTAGACGACTCCCACGCGGTCGGTTTTGTCGGTGAAAATGGTCGTGGTTCCCATGAATACTGCGATGTGATGGGCCGGGTCGATATTATCACCGGTACGCTTGGTAAAGCGCTGGGCGGGGCTTCTGGTGGTTATACCGCGGCGCGCAAAGAAGTGGTTGAGTGGCTGCGCCAGCGTTCTCGTCCGTACCTGTTCTCCAACTCGCTGGCACCGGCCATTGTTGCCGCGTCCATCAAAGTACTGGAGATGGTCGAAGCGGGCAGCGAACTGCGTGACCGTCTGTGGGCGAACGCGCGTCAGTTCCGTGAGCAAATGTCGGCGGCGGGCTTTACCCTGGCGGGAGCCGATCACGCCATTATTCCGGTCATGCTTGGTGATGCGGTAGTGGCGCAGAAATTTGCCCGTGAGCTGCAAAAAGAGGGCATTTACGTTACCGGTTTCTTCTATCCGGTCGTTCCGAAAGGTCAGGCGCGTATTCGTACCCAGATGTCTGCGGCGCATACCCCTGAGCAAATTACGCGTGCAGTAGAAGCATTTACGCGTATTGGTAAACAACTGGGCGTTATCGCCTGA", - "dna_sequence_length": 1197, - "functions": [ - "glycine C-acetyltransferase" - ], - "id": "CDS_3564", - "location": [ - [ - "NC_000913", - 3792551, - "-", - 1197 - ] - ], - "md5": "ab9a426a978a07ee51c6a0f475af6fe2", - "parent_gene": "", - "protein_md5": "05afc641074561bb7c3cff9689e350ff", - "protein_translation": "MRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFTLAGADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLGVIA", - "protein_translation_length": 398, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3618" - ], - [ - "gene_synonym", - "GI:90111622" - ], - [ - "gene_synonym", - "NP_418075.2" - ], - [ - "gene_synonym", - "yibB" - ], - [ - "gene_synonym", - "JW5644" - ], - [ - "gene_synonym", - "ECK3608" - ], - [ - "gene_synonym", - "ASAP:ABE-0011838" - ], - [ - "gene_synonym", - "EcoGene:EG11188" - ], - [ - "gene_synonym", - "GeneID:948137" - ], - [ - "gene_synonym", - "htrL" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25666" - ] - ], - "dna_sequence": "ATGAAATCATCCACCACAATTATCACTGCATATTTTGACATTGGTAGAGGGGATTGGACTGCTAATAAAGGGTTCCGTGAAAAACTAGCTCGTTCAGTTGATGTTTATTTTAGTTACTTTGAGCGTCTGGCCGCACTTGAAAATGAGATGATTATTTTCACTTCTCCCGATTTGAAACCAAGGGTTGAAGCGATTCGCAACGGAAAACCAACAACGGTTATCGTTATCGATATAAAAAAGAAATTTAGATATATCAGAAGTCGTATCGAAAAAATTCAAAAAGATGAGTCGTTTACAAATAGACTTGAGCCTCGACAATTAAAAAACCCAGAGTACTGGTCACCAGAGTATGTTTTGGTATGTAACCTTAAGGCCTATTTTGTAAATAAAGCTATCAACATGGGCTTAGTGAAAACGCCTCTTGTTGCGTGGATAGATTTTGGCTATTGCCATAAGCCAAATGTAACTCGAGGATTGAAAATTTGGGATTTCCCATTTGATGAAAGTAAGATGCATCTTTTCACTATAAAAAAAGGGCTTACTGTCACATCTCAACAACAGGTTTTTGATTTCATGATTGGCAATCATGTATATATTATTGGGGGCGCAATTGTTGGTTCACAGCATAAATGGAAAGAATTCTATAAATTAGTTCTGGAAAGTCAAAAAATAACACTAAATAATAACATTGTGGACGATGACCAGGGCATTTTTGTCATGTGCTATTACAAACGCCCCGATCTCTTCAACCTAAACTATCTGGGGAGAGGAAAATGGTTCGATTTGTTTCGCTGCTTCAGGAGTAACACTTTAGGGGCAAAAATGCAGGCGCTGAGAATTTTCCTTTCAAGAAAATAG", - "dna_sequence_length": 858, - "functions": [ - "YibB family protein, function unknown" - ], - "id": "CDS_3565", - "location": [ - [ - "NC_000913", - 3793683, - "-", - 858 - ] - ], - "md5": "5e5a734fcb97fcd84e7d4a96d6614e08", - "parent_gene": "", - "protein_md5": "cf898b0287c333eeef482cb77870fe8c", - "protein_translation": "MKSSTTIITAYFDIGRGDWTANKGFREKLARSVDVYFSYFERLAALENEMIIFTSPDLKPRVEAIRNGKPTTVIVIDIKKKFRYIRSRIEKIQKDESFTNRLEPRQLKNPEYWSPEYVLVCNLKAYFVNKAINMGLVKTPLVAWIDFGYCHKPNVTRGLKIWDFPFDESKMHLFTIKKGLTVTSQQQVFDFMIGNHVYIIGGAIVGSQHKWKEFYKLVLESQKITLNNNIVDDDQGIFVMCYYKRPDLFNLNYLGRGKWFDLFRCFRSNTLGAKMQALRIFLSRK", - "protein_translation_length": 285, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "gmhD" - ], - [ - "gene_synonym", - "GI:16131490" - ], - [ - "gene_synonym", - "b3619" - ], - [ - "gene_synonym", - "NP_418076.1" - ], - [ - "gene_synonym", - "nbsB" - ], - [ - "gene_synonym", - "hldD" - ], - [ - "gene_synonym", - "htrM" - ], - [ - "gene_synonym", - "waaD" - ], - [ - "gene_synonym", - "ECK3609" - ], - [ - "gene_synonym", - "JW3594" - ], - [ - "gene_synonym", - "rfaD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P67910" - ], - [ - "gene_synonym", - "ASAP:ABE-0011843" - ], - [ - "gene_synonym", - "GeneID:948134" - ], - [ - "gene_synonym", - "EcoGene:EG10838" - ] - ], - "dna_sequence": "ATGATCATCGTTACCGGCGGCGCGGGCTTTATCGGCAGCAACATCGTTAAAGCCCTGAATGATAAAGGCATCACCGATATTCTGGTGGTGGACAACCTGAAAGACGGCACCAAGTTTGTGAACCTGGTGGATCTGAATATCGCAGACTATATGGATAAGGAAGACTTCCTGATCCAGATTATGGCTGGCGAAGAGTTCGGCGATGTCGAAGCGATTTTCCACGAAGGCGCGTGCTCTTCCACCACCGAGTGGGACGGCAAGTATATGATGGATAACAACTATCAATACTCCAAGGAGCTGCTGCACTACTGCCTGGAGCGTGAAATCCCGTTCCTGTACGCTTCTTCCGCAGCCACCTACGGCGGACGCACCTCCGACTTTATTGAATCCCGCGAGTACGAAAAACCGTTGAACGTCTACGGTTACTCAAAATTCCTGTTTGATGAATATGTTCGTCAAATCCTGCCTGAAGCGAACTCGCAGATTGTTGGCTTCCGTTATTTCAACGTTTATGGACCGCGTGAAGGCCATAAAGGCAGCATGGCGAGCGTCGCTTTCCATCTCAACACCCAGCTTAACAACGGTGAATCACCGAAGCTGTTTGAAGGTAGCGAGAACTTCAAACGCGACTTCGTCTATGTGGGCGACGTGGCTGATGTGAATCTGTGGTTCCTGGAAAATGGCGTTTCCGGCATCTTCAATCTCGGTACTGGTCGTGCGGAATCCTTCCAGGCGGTAGCTGATGCTACGCTGGCTTATCACAAGAAAGGCCAGATCGAATACATTCCGTTCCCGGATAAACTGAAAGGCCGCTATCAGGCGTTCACTCAGGCAGATCTGACAAATCTGCGCGCGGCGGGTTACGACAAACCGTTCAAAACCGTTGCTGAAGGTGTAACGGAATACATGGCCTGGCTGAATCGCGACGCATAA", - "dna_sequence_length": 933, - "functions": [ - "ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding" - ], - "id": "CDS_3566", - "location": [ - [ - "NC_000913", - 3793987, - "+", - 933 - ] - ], - "md5": "ffb4a7a8516abb3ecdece2ba9ff71873", - "parent_gene": "", - "protein_md5": "d42624d49e07b165ca8ce2c4357ecf2d", - "protein_translation": "MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA", - "protein_translation_length": 310, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131491" - ], - [ - "gene_synonym", - "EcoGene:EG12210" - ], - [ - "gene_synonym", - "waaF" - ], - [ - "gene_synonym", - "ECK3610" - ], - [ - "gene_synonym", - "JW3595" - ], - [ - "gene_synonym", - "b3620" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37692" - ], - [ - "gene_synonym", - "rfaF" - ], - [ - "gene_synonym", - "ASAP:ABE-0011845" - ], - [ - "gene_synonym", - "NP_418077.1" - ], - [ - "gene_synonym", - "GeneID:948135" - ] - ], - "dna_sequence": "ATGAAAATACTGGTGATCGGCCCGTCTTGGGTTGGCGACATGATGATGTCGCAAAGTCTCTATCGCACGCTCCAGGCGCGCTATCCCCAGGCGATAATCGATGTGATGGCACCGGCATGGTGCCGTCCATTATTATCGCGGATGCCGGAAGTTAACGAAGCTATTCCTATGCCTCTCGGTCACGGAGCGCTGGAAATCGGCGAACGCCGCAAACTGGGTCATAGCCTGCGTGAAAAGCGCTACGACCGCGCCTACGTCTTACCCAACTCCTTCAAATCTGCATTAGTGCCTTTCTTCGCGGGTATTCCTCATCGCACCGGCTGGCGCGGCGAGATGCGCTACGGTTTACTCAACGATGTACGCGTGCTCGATAAAGAAGCCTGGCCGCTAATGGTGGAACGCTATATAGCGCTGGCCTATGACAAAGGCATTATGCGCACAGCACAAGATCTGCCGCAGCCATTGTTATGGCCGCAGTTGCAGGTGAGCGAAGGTGAAAAATCATATACCTGTAATCAATTTTCGCTTTCATCAGAACGTCCGATGATTGGTTTTTGCCCGGGTGCGGAGTTTGGTCCGGCAAAACGCTGGCCACACTACCACTATGCGGAGCTGGCAAAGCAGCTGATTGATGAAGGTTATCAGGTGGTTCTGTTTGGCTCGGCGAAAGATCATGAAGCGGGCAATGAGATTCTTGCCGCTTTGAATACCGAGCAGCAGGCATGGTGTCGGAACCTGGCGGGGGAAACACAGCTTGATCAAGCGGTTATCCTGATTGCAGCCTGTAAAGCCATTGTCACTAACGATTCTGGCCTGATGCATGTTGCGGCGGCGCTCAATCGTCCGCTGGTTGCCCTGTATGGTCCGAGTAGCCCGGACTTCACACCGCCGCTATCCCATAAAGCGCGCGTGATCCGTTTGATTACCGGCTATCACAAAGTGCGTAAAGGTGACGCTGCGGAGGGTTATCACCAGAGCTTAATCGACATTACTCCCCAGCGCGTACTGGAAGAACTCAACGCGCTATTGTTACAAGAGGAAGCCTGA", - "dna_sequence_length": 1047, - "functions": [ - "ADP-heptose:LPS heptosyltransferase II" - ], - "id": "CDS_3567", - "location": [ - [ - "NC_000913", - 3794929, - "+", - 1047 - ] - ], - "md5": "d1e8614854396b9fdcd94f150b095df7", - "parent_gene": "", - "protein_md5": "c06eb074ad8381e36e1846f5c56d7b2c", - "protein_translation": "MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLGHGALEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGIPHRTGWRGEMRYGLLNDVRVLDKEAWPLMVERYIALAYDKGIMRTAQDLPQPLLWPQLQVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVAAALNRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAAEGYHQSLIDITPQRVLEELNALLLQEEA", - "protein_translation_length": 348, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "waaC" - ], - [ - "gene_synonym", - "GI:16131492" - ], - [ - "gene_synonym", - "ECK3611" - ], - [ - "gene_synonym", - "JW3596" - ], - [ - "gene_synonym", - "yibC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24173" - ], - [ - "gene_synonym", - "b3621" - ], - [ - "gene_synonym", - "ASAP:ABE-0011847" - ], - [ - "gene_synonym", - "rfaC" - ], - [ - "gene_synonym", - "GeneID:948136" - ], - [ - "gene_synonym", - "EcoGene:EG11189" - ], - [ - "gene_synonym", - "NP_418078.1" - ] - ], - "dna_sequence": "ATGCGGGTTTTGATCGTTAAAACATCGTCGATGGGCGATGTTCTCCATACGTTGCCCGCACTCACTGATGCCCAGCAGGCAATCCCAGGGATTAAGTTTGACTGGGTGGTGGAAGAAGGGTTCGCACAGATTCCTTCCTGGCACGCTGCCGTTGAGCGAGTTATTCCTGTGGCAATACGTCGCTGGCGTAAAGCCTGGTTCTCGGCCCCCATAAAAGCGGAACGCAAAGCGTTTCGTGAAGCGCTACAAGCAGAGAACTATGACGCAGTTATCGACGCTCAGGGGCTGGTAAAAAGCGCGGCGCTGGTGACGCGTCTGGCGCATGGCGTAAAGCATGGCATGGACTGGCAAACCGCTCGCGAACCTTTAGCCAGCCTGTTTTACAATCGTAAGCATCATATTGCAAAACAGCAGCACGCCGTAGAACGCACCCGCGAACTGTTTGCCAAAAGTTTGGGCTATAGCAAACCGCAAACCCAGGGCGATTATGCTATCGCACAGCATTTTCTGACGAACCTGCCTACAGATGCTGGCGAATATGCCGTATTTCTTCATGCGACGACCCGTGATGATAAACACTGGCCGGAAGAACACTGGCGAGAATTGATTGGTTTACTGGCTGATTCAGGAATACGGATTAAACTTCCGTGGGGCGCGCCGCATGAGGAAGAACGGGCGAAACGACTGGCGGAAGGATTTGCTTATGTTGAAGTATTGCCGAAGATGAGTCTGGAAGGCGTTGCCCGCGTGCTGGCCGGGGCTAAATTTGTAGTGTCGGTGGATACGGGGTTAAGCCATTTAACGGCGGCACTGGATAGACCCAATATCACGGTTTATGGACCAACCGATCCGGGATTAATTGGTGGGTATGGGAAGAATCAGATGGTATGTAGGGCTCCAAGAGAAAATTTAATTAACCTCAACAGTCAAGCAGTTTTGGAAAAGTTATCATCATTATAA", - "dna_sequence_length": 960, - "functions": [ - "ADP-heptose:LPS heptosyl transferase I" - ], - "id": "CDS_3568", - "location": [ - [ - "NC_000913", - 3795979, - "+", - 960 - ] - ], - "md5": "daecfe184a664452c6424420c92f198a", - "parent_gene": "", - "protein_md5": "2bf83ea01d6f83c16c0aaced1463fed0", - "protein_translation": "MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPVAIRRWRKAWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAALVTRLAHGVKHGMDWQTAREPLASLFYNRKHHIAKQQHAVERTRELFAKSLGYSKPQTQGDYAIAQHFLTNLPTDAGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPRENLINLNSQAVLEKLSSL", - "protein_translation_length": 319, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131493" - ], - [ - "gene_synonym", - "ECK3612" - ], - [ - "gene_synonym", - "JW3597" - ], - [ - "gene_synonym", - "b3622" - ], - [ - "gene_synonym", - "waaL" - ], - [ - "gene_synonym", - "NP_418079.1" - ], - [ - "gene_synonym", - "GeneID:948148" - ], - [ - "gene_synonym", - "EcoGene:EG11424" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27243" - ], - [ - "gene_synonym", - "rfaL" - ], - [ - "gene_synonym", - "ASAP:ABE-0011849" - ] - ], - "dna_sequence": "ATGCTAACATCCTTTAAACTTCATTCATTGAAACCTTACACTCTGAAATCATCAATGATTTTAGAGATAATAACTTATATATTATGTTTTTTTTCAATGATAATTGCATTCGTCGATAATACTTTCAGCATAAAAATATATAATATCACTGCTATAGTTTGCTTATTGTCACTAATTTTACGTGGCAGACAAGAAAATTATAATATAAAAAACCTTATTCTTCCCCTTTCTATATTTTTAATAGGCTTGCTTGATTTAATTTGGTATTCTGCGTTTAAAGTAGATAATTCGCCATTTCGTGCTACTTACCATAGTTATTTAAATACTGCCAAAATATTTATATTTGGTTCTTTTATTGTTTTCTTGACACTAACTAGCCAGCTAAAATCAAAAAAAGAGAGTGTATTATACACTTTGTATTCTCTGTCATTTCTAATTGCTGGATATGCAATGTATATTAATAGCATTCATGAAAATGACCGCATTTCTTTTGGTGTAGGAACGGCAACAGGAGCAGCATATTCAACAATGCTAATAGGGATAGTTAGTGGCGTTGCGATTCTTTATACTAAGAAAAATCATCCTTTTTTATTTTTATTAAATAGTTGCGCGGTACTTTATGTTCTGGCGCTAACACAAACCAGAGCAACCCTACTCCTGTTCCCTATAATTTGTGTTGCTGCATTAATAGCTTATTATAATAAATCACCCAAGAAATTCACTTCCTCTATTGTTCTACTAATTGCTATATTAGCTAGCATTGTTATTATATTTAATAAACCAATACAGAATCGCTATAATGAAGCATTAAATGACTTAAACAGTTATACCAATGCTAATAGTGTTACTTCCCTAGGTGCAAGACTGGCAATGTACGAAATTGGTTTAAATATATTCATAAAGTCACCTTTTTCATTTAGATCAGCAGAGTCACGCGCTGAAAGTATGAATTTGTTAGTTGCAGAACACAATAGGCTAAGAGGGGCATTGGAGTTTTCTAACGTACATCTACATAATGAGATAATTGAAGCAGGGTCACTGAAAGGTCTGATGGGAATTTTTTCCACACTTTTCCTCTATTTTTCACTATTTTATATAGCATATAAAAAACGAGCTTTGGGTTTGTTGATATTAACGCTTGGCATTGTGGGGATTGGACTCAGTGATGTGATCATATGGGCACGCAGCATTCCAATTATCATTATATCCGCTATAGTCCTCTTACTCGTCATTAATAATCGTAACAATACAATTAATTAA", - "dna_sequence_length": 1260, - "functions": [ - "O-antigen ligase" - ], - "id": "CDS_3569", - "location": [ - [ - "NC_000913", - 3796948, - "+", - 1260 - ] - ], - "md5": "843b6dae3952e7817e65a46a721806ff", - "parent_gene": "", - "protein_md5": "92583900408b902431a8b1e8cbc84e5f", - "protein_translation": "MLTSFKLHSLKPYTLKSSMILEIITYILCFFSMIIAFVDNTFSIKIYNITAIVCLLSLILRGRQENYNIKNLILPLSIFLIGLLDLIWYSAFKVDNSPFRATYHSYLNTAKIFIFGSFIVFLTLTSQLKSKKESVLYTLYSLSFLIAGYAMYINSIHENDRISFGVGTATGAAYSTMLIGIVSGVAILYTKKNHPFLFLLNSCAVLYVLALTQTRATLLLFPIICVAALIAYYNKSPKKFTSSIVLLIAILASIVIIFNKPIQNRYNEALNDLNSYTNANSVTSLGARLAMYEIGLNIFIKSPFSFRSAESRAESMNLLVAEHNRLRGALEFSNVHLHNEIIEAGSLKGLMGIFSTLFLYFSLFYIAYKKRALGLLILTLGIVGIGLSDVIIWARSIPIIIISAIVLLLVINNRNNTIN", - "protein_translation_length": 419, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3598" - ], - [ - "gene_synonym", - "waaK" - ], - [ - "gene_synonym", - "NP_418080.1" - ], - [ - "gene_synonym", - "ECK3613" - ], - [ - "gene_synonym", - "b3623" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27242" - ], - [ - "gene_synonym", - "EcoGene:EG11423" - ], - [ - "gene_synonym", - "waaU" - ], - [ - "gene_synonym", - "ASAP:ABE-0011851" - ], - [ - "gene_synonym", - "GI:16131494" - ], - [ - "gene_synonym", - "rfaK" - ], - [ - "gene_synonym", - "GeneID:948147" - ] - ], - "dna_sequence": "ATGCGCTTAGGAACTTTTCACAAAAAGAAAAGATTTTATATAAACAAAATCAAGATTAATTTCCTTTCTTTTTTATTTCGTAATAAAATAAATAATCAAATTACAGATCCAGCACAAGTTAAATCATGCCTTATTATTCATGATAATAATAAACTTGGTGATCTAATTGTATTAAGTTCGATTTATCGTGAACTTTATAGTAAAGGGGTTAAAATAACTCTTCTCACAAATAGAAAGGGTGGGGAATTTCTCTCTAATAATAAAAATATATTTGAGTTCTGTATTAAAGAATCAACCGGTTTTCTTGAAATGCTTACTCTATGTAAGCATCTGCGGGATTTACAGTTCGATATTGTATTAGACCCCTTTGAAACTATGCCCTCATTTAAGCATAGCTTAATATTATCAAGTTTAAAAGATTCTTACATTCTGGGTTTTGATCATTGGTATAAGCGTTACTATTCATTTTACCATCCCCACGATGAATGTTTAAAAGAACATATGAGTACACGAGCAATAGAAATACTGAAGCATATTTATGGTGAGGGTAAATTTTCCACCAACTACGACTTGCATTTACCAGTAGATGTTGAAGATAAAATAAAAGAATTTATTGGAGATACAAGAATAGTCATTATTAATCCATTAGGTGCAAAAAAAATATGCCGTCTTACGTTTGAGCAAATAAAAGTTATATATCAAGAAGTGAAAACACACTTTGAAAATTATCGGATTATATTTACCGGGTTACCGCAAGATTTATTGACAATACCAATACTTGAAATCGAAACACTACCATTTGATGAGTTTATTTATACCGTTGCGTTGACCAAGTATAGTGATTTTGTCATTTCTGTTGATACAGCTCTTGTTCATATCGCTGCGGCTTATCATAAACCAACGCTTGCATTTTACCCTAATTCACGTACTCCGGAATATCCCTCGCATTTAATTTGGTCCCCGAATCATCATAAATCTATACAAATAGTATCCCCAACATATACGGTAAAAGATATCGATACTGAAACTTTAACTAATTCAGTAAAGAGATTAAGTTGTATAGATAAGAAGTGA", - "dna_sequence_length": 1074, - "functions": [ - "lipopolysaccharide core biosynthesis" - ], - "id": "CDS_3570", - "location": [ - [ - "NC_000913", - 3799312, - "-", - 1074 - ] - ], - "md5": "8cddbcc1b5f95b69513e6a3c056ce146", - "parent_gene": "", - "protein_md5": "abfb562220e95ca85a1426aeaa09317d", - "protein_translation": "MRLGTFHKKKRFYINKIKINFLSFLFRNKINNQITDPAQVKSCLIIHDNNKLGDLIVLSSIYRELYSKGVKITLLTNRKGGEFLSNNKNIFEFCIKESTGFLEMLTLCKHLRDLQFDIVLDPFETMPSFKHSLILSSLKDSYILGFDHWYKRYYSFYHPHDECLKEHMSTRAIEILKHIYGEGKFSTNYDLHLPVDVEDKIKEFIGDTRIVIINPLGAKKICRLTFEQIKVIYQEVKTHFENYRIIFTGLPQDLLTIPILEIETLPFDEFIYTVALTKYSDFVISVDTALVHIAAAYHKPTLAFYPNSRTPEYPSHLIWSPNHHKSIQIVSPTYTVKDIDTETLTNSVKRLSCIDKK", - "protein_translation_length": 357, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3599" - ], - [ - "gene_synonym", - "b3624" - ], - [ - "gene_synonym", - "EcoGene:EG11426" - ], - [ - "gene_synonym", - "ECK3614" - ], - [ - "gene_synonym", - "rfaZ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27241" - ], - [ - "gene_synonym", - "NP_418081.1" - ], - [ - "gene_synonym", - "waaZ" - ], - [ - "gene_synonym", - "GeneID:948146" - ], - [ - "gene_synonym", - "ASAP:ABE-0011854" - ], - [ - "gene_synonym", - "GI:16131495" - ] - ], - "dna_sequence": "ATGAAGAATATTAGATACATTGACAAAAAAGATGTTGAAAACCTGATTGAAAATAAAATATCTGATGATGTTATTATTTTTCTTTCGGGCCCTACATCGCAAAAAACACCTTTGTCAGTATTACGAACAAAGGATATTATTGCTGTCAATGGTTCTGCGCAATATCTGTTAAGTAATAATATCGTTCCTTTTATATATGTACTTACAGATGTCCGATTTTTACATCAGCGTCGTGATGATTTTTATAAATTTAGCCAGAGAAGTCGTTATACCATAGTAAACGTTGACGTTTATGAACACGCTTCCAAAGAAGATAAACTTTATATCCTCCAGAACTGCCTCGTATTACGGTCCTTTTACCGTCGGGAAAAAGGTGGTTTTATAAAGAAGATTAAATTTAATATTTTGAGACAGATTCACAAAGAACTGCTGATCTCTGTACCGTTGTCTAAAAAAGGTCGTCTGGTTGGATTTTGCAAGGACATTAGTCTTGGTTATTGCTCATGCCATACTATTGCCTTTGCTGCAATTCAAATCGCATATTCACTTAAGTATGCGCGGATTATTTGTTCTGGTCTTGATTTAACGGGTAGCTGTTCTCGTTTCTATGATGAGAATAAAAATCCCATGCCCTCGGAATTAAGTAGGGATTTATTCAAAATATTGCCATTTTTTCGTTTTATGCATGATAATGTAAAAGATATTAATATTTATAATTTATCAGATGATACAGCTATTTCTTACGATGTAATTCCATTTATTAAACTTCAAGACATCAGTGCAGAAGAATCAAAAGATATGACAAGAAAAAAAATGCAATATAGAACTTCAACCGATTCTTATGCTAATTAA", - "dna_sequence_length": 852, - "functions": [ - "lipopolysaccharide KdoIII transferase", - "lipopolysaccharide core biosynthesis protein" - ], - "id": "CDS_3571", - "location": [ - [ - "NC_000913", - 3800196, - "-", - 852 - ] - ], - "md5": "b529b0d8d4bdb7113a538436f7f7c79a", - "parent_gene": "", - "protein_md5": "8ecc5c70e58b0824fc6a89679d6774cf", - "protein_translation": "MKNIRYIDKKDVENLIENKISDDVIIFLSGPTSQKTPLSVLRTKDIIAVNGSAQYLLSNNIVPFIYVLTDVRFLHQRRDDFYKFSQRSRYTIVNVDVYEHASKEDKLYILQNCLVLRSFYRREKGGFIKKIKFNILRQIHKELLISVPLSKKGRLVGFCKDISLGYCSCHTIAFAAIQIAYSLKYARIICSGLDLTGSCSRFYDENKNPMPSELSRDLFKILPFFRFMHDNVKDINIYNLSDDTAISYDVIPFIKLQDISAEESKDMTRKKMQYRTSTDSYAN", - "protein_translation_length": 283, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131496" - ], - [ - "gene_synonym", - "b3625" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27240" - ], - [ - "gene_synonym", - "ECK3615" - ], - [ - "gene_synonym", - "NP_418082.1" - ], - [ - "gene_synonym", - "EcoGene:EG11425" - ], - [ - "gene_synonym", - "rfaY" - ], - [ - "gene_synonym", - "JW3600" - ], - [ - "gene_synonym", - "waaY" - ], - [ - "gene_synonym", - "GeneID:948145" - ], - [ - "gene_synonym", - "ASAP:ABE-0011856" - ] - ], - "dna_sequence": "ATGATTCAGAAGAGCAAGATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATGACTTCTTGTCTTATAATATAAATATCATCAAGGTTTTTCGTTCTATTGATGATACAAAAGTTATGCTTATTGATACCGATTACGGTAAATTGATTCTTAAGGTTTTTTCTCCGAAAGTTAAGCGTAACGAACGTTTCTTTAAGTCTCTGTTAAAAGGTGATTATTACGAACGCCTTTTTGAGCAAACCCAAAAAGTACGAAATGAAGGGTTAAATACACTCAATGACTTTTATTTATTGGCTGAACGGAAAACCTTACGTTTTGTCCATACTTATATCATGATCATCGAGTATATTGATGGCATAGAGTTGTGTGATATGCCCGATATTGATGATGCGCTAAAAAATAAAATTCAGCAATCAATTAATGCCTTACATCAACATGGCATGGTTTCTGGCGACCCCCATCGTGGTAACTTCATTATAAAAAATGGTGAGGTTCGAATTATCGATCTCTCCGGAAAGCGTGCTTCAGCGCAGCGTAAAGCGAAAGATCGTATTGACTTAGAGCGTCATTACGGTATTAAAAATGAGATTAGAGATCTAGGCTATTATCTTTTAGTATATCGTAAAAAAATGCGCAATTTTATGCGGCGTTTGAAAGGGAAACCAGCGCGCTAA", - "dna_sequence_length": 699, - "functions": [ - "lipopolysaccharide core biosynthesis protein" - ], - "id": "CDS_3572", - "location": [ - [ - "NC_000913", - 3800965, - "-", - 699 - ] - ], - "md5": "25719ec2d92e5dae0a81a834cf1d78d3", - "parent_gene": "", - "protein_md5": "11985a3d246f43ca04a18adbe64c7d7a", - "protein_translation": "MIQKSKIKDLVVFTDENNSKYLNVLNDFLSYNINIIKVFRSIDDTKVMLIDTDYGKLILKVFSPKVKRNERFFKSLLKGDYYERLFEQTQKVRNEGLNTLNDFYLLAERKTLRFVHTYIMIIEYIDGIELCDMPDIDDALKNKIQQSINALHQHGMVSGDPHRGNFIIKNGEVRIIDLSGKRASAQRKAKDRIDLERHYGIKNEIRDLGYYLLVYRKKMRNFMRRLKGKPAR", - "protein_translation_length": 232, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27129" - ], - [ - "gene_synonym", - "ASAP:ABE-0011858" - ], - [ - "gene_synonym", - "GI:16131497" - ], - [ - "gene_synonym", - "b3626" - ], - [ - "gene_synonym", - "waaJ" - ], - [ - "gene_synonym", - "NP_418083.1" - ], - [ - "gene_synonym", - "ECK3616" - ], - [ - "gene_synonym", - "waaR" - ], - [ - "gene_synonym", - "JW3601" - ], - [ - "gene_synonym", - "EcoGene:EG11353" - ], - [ - "gene_synonym", - "rfaN" - ], - [ - "gene_synonym", - "GeneID:948142" - ], - [ - "gene_synonym", - "rfaJ" - ] - ], - "dna_sequence": "GTGGACTCATTTCCTGCCATAGAGATAGATAAAGTTAAAGCCTGGGATTTTCGGCTAGCTAATATAAATACTTCTGAATGTTTAAATGTTGCCTATGGTGTCGATGCTAATTATCTTGATGGTGTAGGTGTTTCCATCACATCAATTGTCCTAAATAATCGACATATTAATCTTGATTTTTATATTATTGCTGATGTTTATAATGATGGTTTTTTTCAAAAAATTGCAAAGCTTGCAGAGCAAAACCAATTAAGAATCACGTTATATAGAATTAACACTGATAAGCTCCAGTGCTTGCCTTGTACACAGGTCTGGTCAAGAGCAATGTACTTCCGTTTATTTGCATTTCAATTATTGGGTTTAACGCTTGATCGTTTGCTTTATCTTGATGCAGATGTTGTTTGTAAAGGCGATATTAGCCAACTATTACATCTGGGTTTAAATGGAGCGGTTGCTGCTGTTGTTAAAGATGTTGAGCCAATGCAAGAAAAGGCGGTATCCAGGTTGTCTGATCCTGAATTACTTGGGCAGTACTTTAATTCCGGTGTCGTTTATTTAGACTTAAAAAAATGGGCTGACGCAAAACTAACAGAAAAAGCGTTGTCTATTCTTATGAGTAAAGATAATGTTTATAAATACCCTGATCAGGATGTTATGAATGTCTTACTGAAAGGGATGACATTATTTTTGCCTCGTGAGTACAATACAATTTATACAATTAAAAGTGAATTAAAAGACAAAACACATCAAAACTATAAAAAGCTGATTACAGAAAGTACTCTTCTTATTCATTATACAGGTGCAACTAAACCGTGGCACAAATGGGCAATTTATCCATCGGTAAAATACTATAAAATAGCTTTAGAAAATTCCCCCTGGAAAGATGACTCTCCACGAGATGCGAAATCAATTATTGAATTTAAAAAAAGATATAAACATCTTTTAGTGCAACATCATTATATCTCAGGAATTATAGCAGGAGTCTGTTATCTTTGCCGAAAATATTACCGTAAATAA", - "dna_sequence_length": 1017, - "functions": [ - "lipopolysaccharide 1,2-glucosyltransferase", - "UDP-glucose:(glucosyl)LPS alpha-1,2-glucosyltransferase" - ], - "id": "CDS_3573", - "location": [ - [ - "NC_000913", - 3801999, - "-", - 1017 - ] - ], - "md5": "2ce5a5b0343df0912bf1afcfb3cb97f8", - "parent_gene": "", - "protein_md5": "9c3cb14e49d97c36a43a3815806503bc", - "protein_translation": "MDSFPAIEIDKVKAWDFRLANINTSECLNVAYGVDANYLDGVGVSITSIVLNNRHINLDFYIIADVYNDGFFQKIAKLAEQNQLRITLYRINTDKLQCLPCTQVWSRAMYFRLFAFQLLGLTLDRLLYLDADVVCKGDISQLLHLGLNGAVAAVVKDVEPMQEKAVSRLSDPELLGQYFNSGVVYLDLKKWADAKLTEKALSILMSKDNVYKYPDQDVMNVLLKGMTLFLPREYNTIYTIKSELKDKTHQNYKKLITESTLLIHYTGATKPWHKWAIYPSVKYYKIALENSPWKDDSPRDAKSIIEFKKRYKHLLVQHHYISGIIAGVCYLCRKYYRK", - "protein_translation_length": 338, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011860" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27128" - ], - [ - "gene_synonym", - "GI:16131498" - ], - [ - "gene_synonym", - "b3627" - ], - [ - "gene_synonym", - "waaI" - ], - [ - "gene_synonym", - "waaO" - ], - [ - "gene_synonym", - "GeneID:948143" - ], - [ - "gene_synonym", - "ECK3617" - ], - [ - "gene_synonym", - "NP_418084.1" - ], - [ - "gene_synonym", - "JW3602" - ], - [ - "gene_synonym", - "rfaM" - ], - [ - "gene_synonym", - "rfaI" - ], - [ - "gene_synonym", - "EcoGene:EG11352" - ] - ], - "dna_sequence": "ATGCAGCAGGTGTTTTTCCAGGAAACTGAGTTTCTTAATTCAGTTATTGATTATGATCATAAAGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTGGTTGCGGAATTTCGATTGCTTCAATATTAAAATATAATGAAGGAAGTCGATTGTGTTTCCATATTTTTACTGATTATTTTGGTGATGATGATCGTAAGTATTTTGATGCCCTGGCGTTGCAGTATAAAACCAGAATTAAAATATATCTGATTAATGGTGATCGACTGCGCTCATTGCCTAGCACTAAGAATTGGACTCATGCAATATATTTTCGTTTTGTTATTGCAGATTACTTTATTAATAAGGCGCCTAAAGTCCTTTATCTGGATGCAGATATCATTTGTCAGGGGACTATTGAGCCACTAATTAATTTCTCATTTCCTGACGATAAAGTCGCAATGGTTGTTACAGAAGGGCAAGCTGACTGGTGGGAAAAACGCGCCCATTCGTTAGGTGTTGCGGGAATTGCTAAAGGTTACTTTAACTCCGGTTTTTTATTGATTAATACTGCCCAATGGGCGGCTCAGCAGGTTTCTGCACGAGCTATTGCAATGCTAAATGAGCCAGAAATAATCAAAAAAATAACACATCCTGATCAGGATGTGTTAAATATGTTGCTGGCGGATAAACTTATTTTCGCTGATATTAAATATAACACCCAGTTCAGCTTAAATTATCAACTCAAAGAAAGCTTTATAAACCCAGTAACCAACGATACTATTTTTATCCATTATATCGGGCCAACCAAGCCCTGGCATGATTGGGCCTGGGATTATCCTGTATCACAAGCCTTTATGGAGGCAAAAAATGCTTCGCCATGGAAGAATACGGCGTTGCTGAAACCGAACAATAGCAATCAATTAAGATATAGCGCAAAACATATGCTTAAAAAGCATAGATATCTAAAAGGATTTAGCAACTATCTTTTTTATTTTATTGAAAAGATAAAGCATTAA", - "dna_sequence_length": 1020, - "functions": [ - "UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase" - ], - "id": "CDS_3574", - "location": [ - [ - "NC_000913", - 3803058, - "-", - 1020 - ] - ], - "md5": "b02cbe077596f5626d29e42dd7e6da29", - "parent_gene": "", - "protein_md5": "af9a3a3b8c616d6e1929a36575937325", - "protein_translation": "MQQVFFQETEFLNSVIDYDHKVETENLCLDIAYGTDKNFLFGCGISIASILKYNEGSRLCFHIFTDYFGDDDRKYFDALALQYKTRIKIYLINGDRLRSLPSTKNWTHAIYFRFVIADYFINKAPKVLYLDADIICQGTIEPLINFSFPDDKVAMVVTEGQADWWEKRAHSLGVAGIAKGYFNSGFLLINTAQWAAQQVSARAIAMLNEPEIIKKITHPDQDVLNMLLADKLIFADIKYNTQFSLNYQLKESFINPVTNDTIFIHYIGPTKPWHDWAWDYPVSQAFMEAKNASPWKNTALLKPNNSNQLRYSAKHMLKKHRYLKGFSNYLFYFIEKIKH", - "protein_translation_length": 339, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3618" - ], - [ - "gene_synonym", - "waaB" - ], - [ - "gene_synonym", - "syn*" - ], - [ - "gene_synonym", - "EcoGene:EG11351" - ], - [ - "gene_synonym", - "b3628" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27127" - ], - [ - "gene_synonym", - "lps" - ], - [ - "gene_synonym", - "GI:226524757" - ], - [ - "gene_synonym", - "ASAP:ABE-0011862" - ], - [ - "gene_synonym", - "rfaB" - ], - [ - "gene_synonym", - "NP_418085.2" - ], - [ - "gene_synonym", - "JW3603" - ], - [ - "gene_synonym", - "GeneID:948144" - ], - [ - "gene_synonym", - "phx*" - ] - ], - "dna_sequence": "ATGAAAATAGCGTTTATCGGCGAAGCTGTTTCTGGATTTGGCGGCATGGAAACTGTCATCCGTGATGTTATTACTACCTTCAGGCAACAACATATCCAAAGTGAAATGTTTTTCTTTTGTCGTAATGACAAAATGGATAAGGGATGGCTGGAAGGTATTAAATACTCATGTTCATTTTCCAATATTCGTTTAGGTTTTTTGCGTCGGGCGAAACATATTCATGCTCTAAGTAAATGGCTTCAGGAGTACCAACCAGATATCGTTATTTGTATTGATGTGATCTCCTGCCTGTTTGCCGCAAAAGCACGTAAAAAATCAGGAATTGATATGCCAGTATTTTCATGGCCACATTTTTCTTTAGATCACAAAAAACATGCTGAATATATCACCTGTGCCGACTATCATTTAGCAATCAGCTCTGGCATTAAACAGCAAATGATTAATCGAGGTGTAGCAGAATCGACGATAAATGTTATTTTTAATCCCGTCGAAACTAAAGACTCAGTCATTCCCGCGCCCGAGGAAGGTGAAACGGCAACGTTTATTTATGTTGGGCGTATGAAATTTGAAGGCCAGAAAAGAGTTAAAGACCTGCTTGATGGCTTATCACAAGCGAAAGGTAACTGGAAACTCCATGTATTGGGTGATGGCTCCGATTTCGAAAAATGCCAGGCTTATGGTAGAGAATTAAATATTGATGATCGAATTGTCTGGTATGGTTGGCAACAATATCCCTGGGAATTGGTCCAGCAAGATATTGAAAAAGTGAGTGCGTTATTGCTCACGTCATCTTTTGAAGGTTTCCCAATGACCCTACTTGAAGCCTTGTCGTGGGGGATTCCTTGTATCAGTGCCGATTGTGTCTCCGGGCCTGCTGACATTATTCAACCTGATGTCAATGGCCATCTGTATCAACCGGGAGATATTGCTGGTTTTGTAACTCTTCTAAATAAATATATAGCAGGTGAAATTCATATCGAACATGAAAAAATTCCTGCGTCGATCGATGAATTTTACCAATCGAAGTATTACGATAGATTACATAAGGTAATTATTTCTGCTATTTCCCGGAGGAAATAA", - "dna_sequence_length": 1080, - "functions": [ - "lipopolysaccharide 1,6-galactosyltransferase", - "UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase" - ], - "id": "CDS_3575", - "location": [ - [ - "NC_000913", - 3804137, - "-", - 1080 - ] - ], - "md5": "0eea0eb816eaf72d3cf1174467f27390", - "parent_gene": "", - "protein_md5": "11369b91dbae38e8c7c6eea7a7b4121e", - "protein_translation": "MKIAFIGEAVSGFGGMETVIRDVITTFRQQHIQSEMFFFCRNDKMDKGWLEGIKYSCSFSNIRLGFLRRAKHIHALSKWLQEYQPDIVICIDVISCLFAAKARKKSGIDMPVFSWPHFSLDHKKHAEYITCADYHLAISSGIKQQMINRGVAESTINVIFNPVETKDSVIPAPEEGETATFIYVGRMKFEGQKRVKDLLDGLSQAKGNWKLHVLGDGSDFEKCQAYGRELNIDDRIVWYGWQQYPWELVQQDIEKVSALLLTSSFEGFPMTLLEALSWGIPCISADCVSGPADIIQPDVNGHLYQPGDIAGFVTLLNKYIAGEIHIEHEKIPASIDEFYQSKYYDRLHKVIISAISRRK", - "protein_translation_length": 359, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3619" - ], - [ - "gene_synonym", - "NP_418086.1" - ], - [ - "gene_synonym", - "rfaS" - ], - [ - "gene_synonym", - "b3629" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27126" - ], - [ - "gene_synonym", - "waaS" - ], - [ - "gene_synonym", - "EcoGene:EG11350" - ], - [ - "gene_synonym", - "GI:16131500" - ], - [ - "gene_synonym", - "ASAP:ABE-0011864" - ], - [ - "gene_synonym", - "GeneID:948151" - ], - [ - "gene_synonym", - "JW3604" - ] - ], - "dna_sequence": "ATGACTATTTATTTTATAAATTGGGTTGCAGATTATGAATTAAAAATGATTCAGTACCTGAAAAAAAAGTACAAGATAAAAAATATAACAACACCAAAAAAATATAACTGGATTAATAAAAAAATATCAAAAATAGGGATGGATAATGCATGGCTGGGGCGATTATTCATCAAGCATTACCTCAATGATATTAAAAAAGATGACATAATTATCATTAATGACAGTGTTGTTAATAAAGGTATCAATAAACAAATATTAAAAAATATTAACTGTCATAAAGTTTTGCTTCTAAGAAATACTGTTGGCGAAGATTTTATTCTTGATAACGCGAATTATTTCGATATTATATATGATTTTGAGCATAGATTTATAGGGAATGAAAAGATCAAGGCAATAGAACAATTTTTTCCTATAGGAATGGATGAAATTAGAAATTATAGTTTATCTGACAAAAATAACAGCCAGCCAATATGTTTTTTCCTTGGTCGTGATAAAGGGCGTCTTCAAATAATTAATGAGTTAGCCGAGAGATTAACAACACTAGGATGTAAGCTAGATTTTAATGTTGTCAAAGATAAGACATCATCTACGACTTCAAAGTATTTGATTGAAAAACAAATATCTTATGAAGAGAATATTAGAAGAACATTAAATGCTAATATAATTGTTGATATAACCAAAGAAAACCAATCTGGCTGGACTCTTCGTATACTTGAGGCACTATTTTTCAATAAAAAATTAATTACTAATAATATAAATGTATTTGGTTCAGAAATCTATAGTGAATCTCGCTTTTTTATAATAGGTCATGATGATTGGGATAAGTTAGAGTATTTTATTAACTCATCTGTTAAACCAATGGATTATGATAGTTTATATAAATTCAGTCCAGATAAAATGATGTCAACGATTGTTTCTGATTTTATAGACAAATAA", - "dna_sequence_length": 936, - "functions": [ - "lipopolysaccharide rhamnose:KdoIII transferase", - "lipopolysaccharide core biosynthesis protein" - ], - "id": "CDS_3576", - "location": [ - [ - "NC_000913", - 3805116, - "-", - 936 - ] - ], - "md5": "8d5a292697a0db3ddcb7e1815ed1148e", - "parent_gene": "", - "protein_md5": "144003c1c98ec31b8db4e4303efb5bb5", - "protein_translation": "MTIYFINWVADYELKMIQYLKKKYKIKNITTPKKYNWINKKISKIGMDNAWLGRLFIKHYLNDIKKDDIIIINDSVVNKGINKQILKNINCHKVLLLRNTVGEDFILDNANYFDIIYDFEHRFIGNEKIKAIEQFFPIGMDEIRNYSLSDKNNSQPICFFLGRDKGRLQIINELAERLTTLGCKLDFNVVKDKTSSTTSKYLIEKQISYEENIRRTLNANIIVDITKENQSGWTLRILEALFFNKKLITNNINVFGSEIYSESRFFIIGHDDWDKLEYFINSSVKPMDYDSLYKFSPDKMMSTIVSDFIDK", - "protein_translation_length": 311, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948150" - ], - [ - "gene_synonym", - "GI:16131501" - ], - [ - "gene_synonym", - "rfaP" - ], - [ - "gene_synonym", - "b3630" - ], - [ - "gene_synonym", - "NP_418087.1" - ], - [ - "gene_synonym", - "waaP" - ], - [ - "gene_synonym", - "ECK3620" - ], - [ - "gene_synonym", - "ASAP:ABE-0011866" - ], - [ - "gene_synonym", - "EcoGene:EG11340" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25741" - ], - [ - "gene_synonym", - "JW3605" - ] - ], - "dna_sequence": "ATGGTTGAATTAAAAGAGCCGCTTGCCACACTTTGGCGTGGTAAAGATGCTTTTGCAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGCTTTGAACTGTCCGGGAAAAGCTATTTTCTTAAATGGCACAAGGGGACGACATTAAAAGAGATTATAAAAAATCTACTCTCATTGCGGATGCCCGTTTTGGGCGCAGACAGAGAGTGGCACGCTATTCATCGCCTGAGTGATGTTGGCGTTGATACAATGAAGGGCATTGGGTTTGGCGAAAAAGGGTTAAATCCATTAACTCGCGCATCATTTATTATTACCGAAGATCTCACTCCCACAATTAGCCTTGAAGATTATTGTGCCGATTGGGCAGTCAACCCGCCTGATATACGTGTTAAGCGTATGCTGATCGCACGTGTAGCAACTATGGTGCGTAAAATGCATACTGCAGGGATAAATCACCGCGACTGTTACATTTGCCACTTTTTGCTTCATTTGCCATTTACTGGCCGGGAAGATGAATTAAAAATTTCAGTTATCGATCTGCATCGGGCACAGATACGTGCAAAAGTACCGCGCCGCTGGCGCGATAAAGACCTGATTGGTTTATATTTCTCATCAATGAATATTGGCCTGACGCAAAGAGATATCTGGCGATTTATGAAGGTTTATTTTGGGATGCCTTTACGCAAAATATTGTCTCTTGAACAGAATTTATTGAACATGGCAAGCGTTAAGGCCGAGCGTATTAAAGAGCGAACACAACGCAAAGGATTATAA", - "dna_sequence_length": 798, - "functions": [ - "kinase that phosphorylates core heptose of lipopolysaccharide" - ], - "id": "CDS_3577", - "location": [ - [ - "NC_000913", - 3805950, - "-", - 798 - ] - ], - "md5": "b8f989554d953e48c90391fc5bf2a15a", - "parent_gene": "", - "protein_md5": "d81661e1b38bb1dd15d6ed2325b21225", - "protein_translation": "MVELKEPLATLWRGKDAFAEVKKLNGEVFRELETRRTLRFELSGKSYFLKWHKGTTLKEIIKNLLSLRMPVLGADREWHAIHRLSDVGVDTMKGIGFGEKGLNPLTRASFIITEDLTPTISLEDYCADWAVNPPDIRVKRMLIARVATMVRKMHTAGINHRDCYICHFLLHLPFTGREDELKISVIDLHRAQIRAKVPRRWRDKDLIGLYFSSMNIGLTQRDIWRFMKVYFGMPLRKILSLEQNLLNMASVKAERIKERTQRKGL", - "protein_translation_length": 265, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131502" - ], - [ - "gene_synonym", - "GeneID:948149" - ], - [ - "gene_synonym", - "waaG" - ], - [ - "gene_synonym", - "b3631" - ], - [ - "gene_synonym", - "rfaG" - ], - [ - "gene_synonym", - "ECK3621" - ], - [ - "gene_synonym", - "ASAP:ABE-0011868" - ], - [ - "gene_synonym", - "NP_418088.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25740" - ], - [ - "gene_synonym", - "EcoGene:EG11339" - ], - [ - "gene_synonym", - "JW3606" - ] - ], - "dna_sequence": "ATGATCGTGGCGTTTTGTTTATATAAATATTTTCCATTTGGTGGGCTTCAACGTGACTTTATGCGCATTGCATCAACAGTTGCCGCACGGGGCCACCATGTTCGGGTATATACACAGTCGTGGGAAGGCGATTGCCCGAAAGCATTTGAGCTTATTCAGGTGCCAGTTAAGTCCCATACCAACCATGGACGCAATGCAGAATATTATGCCTGGGTACAAAATCATCTCAAAGAGCATCCCGCAGATCGCGTTGTTGGGTTTAATAAGATGCCTGGCCTGGATGTTTATTTTGCCGCTGATGTTTGTTACGCCGAGAAAGTTGCGCAAGAAAAAGGTTTTTTATATCGTTTAACATCACGATATCGCCATTATGCCGCATTTGAGCGAGCGACTTTCGAGCAGGGTAAATCGACGAAACTTATGATGCTGACCGATAAGCAAATCGCCGATTTCCAGAAGCATTATCAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACAGTGAGCAAATCCCAAACAGCCGTGAAATTTATCGCCAGAAAAATGGCATAAAAGAGCAACAAAACTTATTACTGCAGGTTGGATCAGATTTTGGCCGTAAAGGTGTAGATCGCTCAATTGAAGCTTTGGCATCGTTACCGGAATCATTACGTCACAATACGCTTTTATTTGTTGTTGGTCAGGATAAGCCGCGAAAATTTGAAGCGCTGGCAGAAAAACTCGGCGTGCGGAGCAATGTGCATTTCTTCTCCGGTCGCAATGATGTGTCAGAATTAATGGCAGCCGCTGATTTATTACTGCATCCCGCTTATCAGGAAGCCGCGGGTATCGTTCTTCTAGAAGCGATCACTGCTGGGTTACCTGTTTTAACAACAGCGGTATGTGGGTACGCGCATTATATTGCGGATGCCAATTGTGGAACGGTCATCGCTGAACCTTTCTCTCAGGAACAATTAAATGAAGTTTTACGTAAAGCGTTAACTCAGTCGCCATTGCGAATGGCCTGGGCGGAGAATGCTCGCCATTATGCCGATACTCAGGATTTGTATAGCTTGCCAGAAAAAGCCGCGGATATCATTACAGGTGGTTTAGATGGTTGA", - "dna_sequence_length": 1125, - "functions": [ - "UDP-glucose:(heptosyl)lipopolysaccharide alpha-1,3-glucosyltransferase", - "lipopolysaccharide core biosynthesis protein", - "lipopolysaccharide glucosyltransferase I" - ], - "id": "CDS_3578", - "location": [ - [ - "NC_000913", - 3807067, - "-", - 1125 - ] - ], - "md5": "133ed6afd9007068bbda3580f9b08787", - "parent_gene": "", - "protein_md5": "d5cbc44eff39aec46a54237c7b272acb", - "protein_translation": "MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIITGGLDG", - "protein_translation_length": 374, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418089.1" - ], - [ - "gene_synonym", - "EcoGene:EG11341" - ], - [ - "gene_synonym", - "rfaQ" - ], - [ - "gene_synonym", - "b3632" - ], - [ - "gene_synonym", - "GI:16131503" - ], - [ - "gene_synonym", - "waaQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0011870" - ], - [ - "gene_synonym", - "ECK3622" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25742" - ], - [ - "gene_synonym", - "GeneID:948155" - ], - [ - "gene_synonym", - "JW3607" - ] - ], - "dna_sequence": "ATGCGATATCATGGGGATATGTTATTAACTACTCCTGTCATCAGTACGCTCAAGCAGAATTATCCTGATGCAAAAATCGATATGCTGCTTTATCAGGACACCATCCCTATTTTGTCTGAAAACCCGGAAATTAATGCGCTCTATGGGATAAGCAATAAAGGTGCGGGAACTTTCGATAAAATTAAAAATGTGCTTTCGTTGATAAAAACTCTGCGTGCGAATAATTATGACCTGGTCATTAATCTTACGGATCAGTGGATGGTGGCGCTGCTGGTACGTTGTTTACCTGCACGGATGAAAATATCGCAACTTTATGGTCATCGGCAGCATGGTATTTGGAAAAAAAGCTTCACACACTTAGCGCCAATACACGGTACACATATTGTTGAGCGTAATTTATCGGTCCTTGAGCCATTAGGTATTACCGATTTCTACACCGACACAACAATGAGTTACGCCGAAGATTGCTGGAAGAAGATGCGCCGGGAATTAGATGCCCTGGGCGTAAAAGATCATTATGTTGTCATCCAACCGACAGCGCGTCAGATATTTAAGTGTTGGGATAACGATAAATTTTCTAAGGTTATCGATGCGCTGCAACAGCGAGGCTATCAGGTTGTGCTAACCTGTGGGCCCTCGGCAGATGATCTCGCTTGTGTAGATGAGATTGCACGAGGTTGCGAAACAAAACCCATTACTGGCCTTGCAGGTAAAACACGTTTTCCTGAACTGGGTGCATTAATTGATCATGCAGTGCTTTTTATTGGTGTGGATTCTGCGCCGGGACATATTGCAGCGGCAGTGAAAACGCCAGTCATTAGTCTATTTGGTGCAACGGATCACGTATTCTGGCGTCCCTGGACCGAGAATATTATTCAATTCTGGGCGGGGAATTATCAGAAAATGCCGACCCGGCATGAACTTGACCGCAACAAAAAATATCTTTCTGTTATCCCAGCGGAGGATGTGATCGCCGCTACGGAAAAGCTGTTGCCAGAAGATGCCCCTTCAGCTGACAGGAATGCACAATTATGA", 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"ATGCTCGAATTGCTTTACACCGCCCTTCTCTACCTTATTCAGCCGCTGATCTGGATACGGCTCTGGGTGCGCGGACGTAAGGCTCCGGCCTATCGAAAACGCTGGGGTGAACGTTACGGTTTTTACCGCCATCCGCTAAAACCAGGCGGCATTATGCTGCACTCCGTCTCCGTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACGCCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCGTTTCCTGAATAAAGTCGACCCTAAACTGGTGTTGATTATGGAAACCGAACTATGGCCTAACCTGATTGCGGCGCTACATAAACGTAAAATTCCGCTGGTGATCGCTAACGCGCGACTCTCTGCCCGCTCGGCCGCAGGTTATGCCAAACTGGGTAAATTCGTCCGTCGCTTGCTGCGTCGTATTACGCTGATTGCTGCGCAAAATGAAGAAGATGGTGCACGTTTTGTGGCGCTGGGCGCAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCCGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTACAGCAATTCCCGAATTTATTGCTCATCCTGGTACCCCGTCATCCGGAACGCTTCCCGGATGCGATTAACCTTGTCCGCCAGGCTGGACTAAGCTATATCACACGCTCTTCAGGGGAAGTCCCCTCCACCAGCACGCAGGTTGTGGTTGGCGATACGATGGGCGAGTTGATGTTACTGTATGGCATTGCCGATCTCGCCTTTGTTGGCGGTTCACTGGTTGAACGTGGTGGGCATAATCCGCTGGAAGCTGCCGCACACGCTATTCCGGTATTGATGGGGCCGCATACTTTTAACTTTAAAGACATTTGCGCGCGGCTGGAGCAGGCAAGCGGGCTGATTACCGTTACCGATGCCACTACGCTTGCAAAAGAGGTTTCCTCTTTACTCACCGACGCCGATTACCGTAGTTTCTATGGCCGTCATGCCGTTGAAGTACTGTATCAAAACCAGGGCGCGCTACAGCGTCTGCTTCAACTGCTGGAACCTTACCTGCCACCGAAAACGCATTGA", 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"gene_synonym", - "yicA" - ], - [ - "gene_synonym", - "GI:16131505" - ], - [ - "gene_synonym", - "NP_418091.1" - ], - [ - "gene_synonym", - "ECK3624" - ], - [ - "gene_synonym", - "EcoGene:EG11190" - ], - [ - "gene_synonym", - "ASAP:ABE-0011875" - ], - [ - "gene_synonym", - "kdtB" - ], - [ - "gene_synonym", - "coaD" - ], - [ - "gene_synonym", - "GeneID:947386" - ] - ], - "dna_sequence": "ATGCAAAAACGGGCGATTTATCCGGGTACTTTCGATCCCATTACCAATGGTCATATCGATATCGTGACGCGCGCCACGCAGATGTTCGATCACGTTATTCTGGCGATTGCCGCCAGCCCCAGTAAAAAACCGATGTTTACCCTGGAAGAGCGTGTGGCACTGGCACAGCAGGCAACCGCGCATCTGGGGAACGTGGAAGTGGTCGGGTTTAGTGATTTAATGGCGAACTTCGCCCGTAATCAACACGCTACGGTGCTGATTCGTGGCCTGCGTGCGGTGGCAGATTTTGAATATGAAATGCAGCTGGCGCATATGAATCGCCACTTAATGCCGGAACTGGAAAGTGTGTTTCTGATGCCGTCGAAAGAGTGGTCGTTTATCTCTTCATCGTTGGTGAAAGAGGTGGCGCGCCATCAGGGCGATGTCACCCATTTCCTGCCGGAGAATGTCCATCAGGCGCTGATGGCGAAGTTAGCGTAG", - "dna_sequence_length": 480, - "functions": [ - "pantetheine-phosphate adenylyltransferase" - ], - "id": "CDS_3581", - "location": [ - [ - "NC_000913", - 3809825, - "+", - 480 - ] - ], - "md5": "d7013f6d657bcecbfe471eb2c17a2f15", - "parent_gene": "", - "protein_md5": "8e1971e3a4b5e90c16262507a38f99e8", - "protein_translation": "MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA", - "protein_translation_length": 159, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "fpg" - ], - [ - "gene_synonym", - "EcoGene:EG10329" - ], - [ - "gene_synonym", - "JW3610" - ], - [ - "gene_synonym", - "b3635" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05523" - ], - [ - "gene_synonym", - "mutM" - ], - [ - "gene_synonym", - "ECK3625" - ], - [ - "gene_synonym", - "GI:16131506" - ], - [ - "gene_synonym", - "NP_418092.1" - ], - [ - "gene_synonym", - "GeneID:946765" - ], - [ - "gene_synonym", - "ASAP:ABE-0011877" - ] - ], - "dna_sequence": "ATGCCTGAATTACCCGAAGTTGAAACCAGCCGCCGCGGCATAGAACCGCATCTCGTTGGTGCAACCATTCTTCATGCAGTGGTGCGCAACGGACGCTTGCGCTGGCCGGTTTCAGAAGAGATCTACCGTTTAAGCGACCAACCAGTGCTTAGCGTGCAGCGGCGGGCTAAATATCTGCTGCTGGAGCTGCCTGAGGGCTGGATTATCATTCATTTAGGGATGTCTGGCAGCCTGCGCATCCTTCCAGAAGAACTTCCCCCTGAAAAGCATGACCATGTGGATTTGGTGATGAGCAACGGCAAAGTGCTGCGCTACACCGATCCGCGCCGCTTTGGTGCCTGGCTGTGGACCAAAGAGCTGGAAGGGCATAATGTGCTGACCCATCTTGGACCGGAGCCGCTTAGCGACGATTTCAATGGTGAGTATCTGCATCAGAAGTGCGCGAAGAAAAAAACGGCGATTAAACCGTGGCTGATGGATAACAAGCTGGTGGTAGGGGTAGGGAATATCTATGCCAGCGAATCACTGTTTGCGGCGGGGATCCATCCGGATCGGCTGGCGTCATCACTGTCGCTGGCAGAGTGTGAATTGTTAGCTCGGGTGATTAAAGCGGTGTTGCTGCGTTCGATTGAGCAGGGTGGTACAACGCTGAAAGATTTTCTGCAAAGTGATGGTAAACCGGGCTATTTCGCTCAGGAATTGCAGGTTTACGGGCGAAAAGGTGAGCCGTGTCGGGTGTGCGGTACGCCGATTGTGGCGACTAAACATGCGCAGCGGGCAACGTTTTATTGTCGGCAGTGCCAGAAGTAA", - "dna_sequence_length": 810, - "functions": [ - "formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase" - ], - "id": "CDS_3582", - "location": [ - [ - "NC_000913", - 3811152, - "-", - 810 - ] - ], - "md5": "645b1c1a75e8dd75ecd0fc7481f59cbf", - "parent_gene": "", - "protein_md5": "b2bfeb000b2a24507f3b227728727ebf", - "protein_translation": "MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDQPVLSVQRRAKYLLLELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKELEGHNVLTHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK", - "protein_translation_length": 269, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:946318" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7N9" - ], - [ - "gene_synonym", - "JW3611" - ], - [ - "gene_synonym", - "EcoGene:EG10891" - ], - [ - "gene_synonym", - "b3636" - ], - [ - "gene_synonym", - "ECK3626" - ], - [ - "gene_synonym", - "GI:16131507" - ], - [ - "gene_synonym", - "ASAP:ABE-0011883" - ], - [ - "gene_synonym", - "NP_418093.1" - ], - [ - "gene_synonym", - "rpmG" - ] - ], - "dna_sequence": "ATGGCTAAAGGTATTCGTGAGAAAATCAAGCTGGTTTCTTCTGCTGGTACTGGTCACTTCTATACCACTACGAAGAACAAACGTACTAAGCCGGAAAAACTGGAACTGAAAAAATTCGATCCAGTTGTTCGCCAGCACGTGATCTACAAAGAAGCGAAAATCAAATAA", - "dna_sequence_length": 168, - "functions": [ - "50S ribosomal subunit protein L33" - ], - "id": "CDS_3583", - "location": [ - [ - "NC_000913", - 3811417, - "-", - 168 - ] - ], - "md5": "2f877183b0fe732ed4242bc2e69e2de3", - "parent_gene": "", - "protein_md5": "527e433349d66445e6c1224986f9ef24", - "protein_translation": "MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK", - "protein_translation_length": 55, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3612" - ], - [ - "gene_synonym", - "GeneID:946941" - ], - [ - "gene_synonym", - "b3637" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7M2" - ], - [ - "gene_synonym", - "EcoGene:EG10886" - ], - [ - "gene_synonym", - "NP_418094.1" - ], - [ - "gene_synonym", - "ECK3627" - ], - [ - "gene_synonym", - "GI:16131508" - ], - [ - "gene_synonym", - "rpmB" - ], - [ - "gene_synonym", - "ASAP:ABE-0011885" - ] - ], - "dna_sequence": "ATGTCCCGAGTCTGCCAAGTTACTGGCAAGCGTCCGGTGACCGGTAACAACCGTTCCCACGCACTGAACGCGACTAAACGCCGTTTCCTGCCGAACCTGCACTCTCACCGTTTCTGGGTTGAGAGCGAGAAGCGTTTTGTCACCCTGCGCGTATCTGCTAAAGGTATGCGTGTAATCGATAAAAAAGGCATCGATACAGTTCTGGCTGAACTGCGTGCCCGTGGCGAAAAGTACTAA", - "dna_sequence_length": 237, - "functions": [ - "50S ribosomal subunit protein L28" - ], - "id": "CDS_3584", - "location": [ - [ - "NC_000913", - 3811674, - "-", - 237 - ] - ], - "md5": "628e438020c46a820794a17c2b4350d0", - "parent_gene": "", - "protein_md5": "79ee4cfd255906487645a5993f85b1d1", - "protein_translation": "MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKGIDTVLAELRARGEKY", - "protein_translation_length": 78, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25531" - ], - [ - "gene_synonym", - "radC" - ], - [ - "gene_synonym", - "b3638" - ], - [ - "gene_synonym", - "NP_418095.4" - ], - [ - "gene_synonym", - "GeneID:948968" - ], - [ - "gene_synonym", - "GI:162135914" - ], - [ - "gene_synonym", - "ASAP:ABE-0011889" - ], - [ - "gene_synonym", - "JW5643" - ], - [ - "gene_synonym", - "EcoGene:EG11312" - ], - [ - "gene_synonym", - "yicR" - ], - [ - "gene_synonym", - "ECK3628" - ] - ], - "dna_sequence": "GTGAAAAACAATTCACAGCTGTTGATGCCGCGCGAAAAAATGCTGAAGTTTGGTATTAGCGCCTTAACGGATGTCGAGCTGCTGGCGCTATTTCTGCGTACCGGAACGCGCGGTAAAGATGTATTAACCCTGGCAAAAGAGATGCTGGAGAATTTCGGCTCTCTTTATGGCTTGTTAACCTCTGAATATGAACAATTTAGTGGCGTTCATGGAATTGGCGTGGCGAAATTTGCCCAGTTAAAGGGGATTGCTGAACTGGCGCGGCGTTACTACAACGTGCGGATGCGTGAAGAAAGCCCTTTACTCAGCCCGGAGATGACGAGGGAATTTTTACAAAGCCAGCTCACGGGTGAGGAGCGGGAGATCTTTATGGTGATCTTTCTCGACTCCCAACACCGGGTTATAACGCATAGGCGTCTTTTTTCCGGCACGCTAAACCATGTTGAAGTCCATCCTCGGGAAATTATCCGCGAAGCGATAAAAATAAACGCCTCGGCGCTGATCCTTGCACATAATCACCCTTCGGGTTGTGCTGAACCCAGTAAAGCGGATAAACTCATTACTGAACGGATAATAAAGAGTTGTCAGTTCATGGATTTACGCGTGCTCGACCATATCGTGATTGGGCGTGGAGAGTATGTTTCTTTTGCCGAACGCGGCTGGATTTAA", - "dna_sequence_length": 669, - "functions": [ - "UPF0758 family protein" - ], - "id": "CDS_3585", - "location": [ - [ - "NC_000913", - 3812559, - "-", - 669 - ] - ], - "md5": "2018344e375bd8635c2574697938816c", - "parent_gene": "", - "protein_md5": "6107f1bd6a2a80989b9837f57677afec", - "protein_translation": "MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTLAKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLLSPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHRRLFSGTLNHVEVHPREIIREAIKINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAERGWI", - "protein_translation_length": 222, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111624" - ], - [ - "gene_synonym", - "b3639" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABQ0" - ], - [ - "gene_synonym", - "EcoGene:EG10004" - ], - [ - "gene_synonym", - "dfp" - ], - [ - "gene_synonym", - "GeneID:949047" - ], - [ - "gene_synonym", - "JW5642" - ], - [ - "gene_synonym", - "coaBC" - ], - [ - "gene_synonym", - "NP_418096.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0011896" - ], - [ - "gene_synonym", - "ECK3629" - ] - ], - "dna_sequence": "ATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGCAGGCGGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAGCCGCTATGGGCCATATTGAGCTGGGTAAATGGGCTGATTTAGTGATTCTCGCCCCTGCCACGGCAGATTTGATTGCCCGTGTTGCTGCCGGAATGGCGAATGACCTGGTATCGACGATTTGTCTGGCTACACCTGCGCCTGTAGCCGTGCTCCCCGCCATGAACCAGCAGATGTACCGTGCCGCTGCCACGCAGCATAATTTAGAGGTGCTTGCTTCCCGTGGTTTGCTCATCTGGGGGCCAGACAGTGGCAGTCAGGCTTGTGGTGATATCGGTCCTGGGCGAATGCTCGATCCGTTAACCATTGTGGATATGGCGGTAGCGCATTTTTCGCCCGTCAACGACCTGAAACATCTGAACATTATGATTACCGCCGGCCCGACGCGTGAACCGCTCGATCCGGTGCGTTATATCTCTAATCACAGCTCCGGCAAGATGGGTTTTGCTATCGCCGCCGCCGCTGCCCGTCGTGGCGCGAACGTCACGCTGGTATCAGGTCCGGTTTCACTACCGACGCCACCGTTTGTTAAACGTGTTGATGTGATGACCGCGCTGGAAATGGAAGCCGCCGTGAATGCTTCTGTACAGCAGCAAAATATTTTTATCGGCTGCGCCGCCGTGGCGGATTATCGCGCAGCTACCGTGGCCCCAGAGAAAATCAAAAAGCAGGCCACGCAGGGTGATGAATTAACAATAAAAATGGTTAAAAACCCCGATATCGTCGCAGGCGTTGCCGCACTAAAAGACCATCGACCCTACGTCGTTGGATTTGCCGCCGAAACAAATAATGTGGAAGAATACGCCCGGCAAAAACGTATCCGTAAAAACCTTGATCTGATCTGCGCGAACGATGTTTCCCAGCCAACTCAAGGATTTAACAGCGACAACAACGCATTACACCTTTTCTGGCAGGACGGAGATAAAGTCTTACCGCTTGAGCGCAAAGAGCTCCTTGGCCAATTATTACTCGACGAGATCGTGACCCGTTATGATGAAAAAAATCGACGTTAA", 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"UniProtKB/Swiss-Prot:P06968" - ], - [ - "gene_synonym", - "GI:16131511" - ], - [ - "gene_synonym", - "JW3615" - ], - [ - "gene_synonym", - "GeneID:948607" - ], - [ - "gene_synonym", - "NP_418097.1" - ], - [ - "gene_synonym", - "EcoGene:EG10251" - ], - [ - "gene_synonym", - "ECK3630" - ], - [ - "gene_synonym", - "ASAP:ABE-0011899" - ], - [ - "gene_synonym", - "b3640" - ], - [ - "gene_synonym", - "dut" - ] - ], - "dna_sequence": "ATGAAAAAAATCGACGTTAAGATTCTGGACCCGCGCGTTGGGAAGGAATTTCCGCTCCCGACTTATGCCACCTCTGGCTCTGCCGGACTTGACCTGCGTGCCTGTCTCAACGACGCCGTAGAACTGGCTCCGGGTGACACTACGCTGGTTCCGACCGGGCTGGCGATTCATATTGCCGATCCTTCACTGGCGGCAATGATGCTGCCGCGCTCCGGATTGGGACATAAGCACGGTATCGTGCTTGGTAACCTGGTAGGATTGATCGATTCTGACTATCAGGGCCAGTTGATGATTTCCGTGTGGAACCGTGGTCAGGACAGCTTCACCATTCAACCTGGCGAACGCATCGCCCAGATGATTTTTGTTCCGGTAGTACAGGCTGAATTTAATCTGGTGGAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAA", - "dna_sequence_length": 456, - "functions": [ - "deoxyuridinetriphosphatase" - ], - "id": "CDS_3587", - 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"ATGGCAGAAAAACAAACTGCGAAAAGGAACCGTCGCGAGGAAATACTTCAGTCTCTGGCGCTGATGCTGGAATCCAGCGATGGAAGCCAACGTATCACGACGGCAAAACTGGCCGCCTCTGTCGGCGTTTCCGAAGCGGCACTGTATCGCCACTTCCCCAGTAAGACCCGCATGTTCGATAGCCTGATTGAGTTTATCGAAGATAGCCTGATTACTCGCATCAACCTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGTAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCGTATTGAAGCGCAGCTGCGCCAGGTATTGCGTGAAAAGAGAATGCGTGAGGGTGAAGGTTACACCACCGATGAAACCCTGCTGGCAAGCCAGATCCTGGCCTTCTGTGAAGGTATGCTGTCACGTTTTGTCCGCAGCGAATTTAAATACCGCCCGACGGATGATTTTGACGCCCGCTGGCCGCTAATTGCGGCACAGTTGCAGTAA", - "dna_sequence_length": 597, - "functions": [ - "nucleoid occlusion factor, anti-FtsZ division inhibitor" - ], - "id": "CDS_3588", - "location": [ - [ - "NC_000913", - 3814494, - "+", - 597 - ] - ], - "md5": "c8f3b253ec6419398a34a700214e44e4", - "parent_gene": "", - "protein_md5": "103142c372162775cb3f2bc874806e02", - "protein_translation": "MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVSEAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERNPGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLASQILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ", - "protein_translation_length": 198, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3617" - ], - [ - "gene_synonym", - "EcoGene:EG10808" - ], - [ - "gene_synonym", - "GeneID:948157" - ], - [ - "gene_synonym", - "ASAP:ABE-0011904" - ], - [ - "gene_synonym", - "ECK3632" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7E3" - ], - [ - "gene_synonym", - "NP_418099.1" - ], - [ - "gene_synonym", - "pyrE" - ], - [ - "gene_synonym", - "b3642" - ], - [ - "gene_synonym", - "GI:16131513" - ] - ], - "dna_sequence": "ATGAAACCATATCAGCGCCAGTTTATTGAATTTGCGCTTAGCAAGCAGGTGTTAAAGTTTGGCGAGTTTACGCTGAAATCCGGGCGCAAAAGCCCCTATTTCTTCAACGCCGGGCTGTTTAATACCGGGCGCGATCTGGCACTGTTAGGCCGTTTTTACGCTGAAGCGTTGGTGGATTCCGGCATTGAGTTCGATCTGCTGTTTGGCCCTGCTTACAAAGGGATCCCGATTGCCACCACAACCGCTGTGGCACTGGCGGAGCATCACGACCTGGACCTGCCGTACTGCTTTAACCGCAAAGAAGCAAAAGACCACGGTGAAGGCGGCAATCTGGTTGGTAGCGCGTTACAAGGACGCGTAATGCTGGTAGATGATGTGATCACCGCCGGAACGGCGATTCGCGAGTCGATGGAGATTATTCAGGCCAATGGCGCGACGCTTGCTGGCGTGTTGATTTCGCTCGATCGTCAGGAACGCGGGCGCGGCGAGATTTCGGCGATTCAGGAAGTTGAGCGTGATTACAACTGCAAAGTGATCTCTATCATCACCCTGAAAGACCTGATTGCTTACCTGGAAGAGAAGCCGGAAATGGCGGAACATCTGGCGGCGGTTAAGGCCTATCGCGAAGAGTTTGGCGTTTAA", - "dna_sequence_length": 642, - "functions": [ - "orotate phosphoribosyltransferase" - ], - "id": "CDS_3589", - "location": [ - [ - "NC_000913", - 3815768, - "-", - 642 - ] - ], - "md5": "7c43bf3c94a677a65d34b6fbbf1296b7", - "parent_gene": "", - "protein_md5": "2c13089ccc8ac8947d75994bef52960e", - "protein_translation": "MKPYQRQFIEFALSKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKEAKDHGEGGNLVGSALQGRVMLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERGRGEISAIQEVERDYNCKVISIITLKDLIAYLEEKPEMAEHLAAVKAYREEFGV", - "protein_translation_length": 213, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011909" - ], - [ - "gene_synonym", - "EcoGene:EG10863" - ], - [ - "gene_synonym", - "JW3618" - ], - [ - "gene_synonym", - "orfE" - ], - [ - "gene_synonym", - "ECK3633" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CG19" - ], - [ - "gene_synonym", - "rph" - ], - [ - "gene_synonym", - "b3643" - ], - [ - "gene_synonym", - "GeneID:948156" - ] - ], - "dna_sequence": "ATGCGTCCAGCAGGCCGTAGCAATAATCAGGTGCGTCCCGTTACCCTGACTCGTAACTATACAAAACATGCAGAAGGCTCGGTGCTGGTCGAATTTGGCGATACCAAAGTGTTGTGTACCGCCTCTATTGAAGAAGGCGTGCCGCGCTTCCTGAAAGGTCAGGGCCAGGGCTGGATCACCGCAGAGTACGGCATGCTGCCACGTTCTACCCACACCCGTAACGCTCGTGAAGCGGCGAAAGGTAAGCAGGGTGGACGCACAATGGAAATCCAGCGTCTGATCGCCCGTGCTCTTCGCGCGGCAGTAGATTTGAAAGCGCTGGGTGAGTTCACCATTACGCTGGACTGCGACGTGCTTCAGGCTGATGGTGGCACGCGTACCGCGTCGATTACGGGTGCCTGCGTGGCGCTGGTAGATGCGCTACAGAAGCTGGTGGAAAACGGCAAGCTGAAAACCAATCCGATGAAAGGGATGGTAGCCGCAGTTTCTGTCGGAATTGTGAACGGCGAAGCGGTTTGCGATCTGGAATACGTTGAAGACTCTGCCGCAGAGACCGACATGAACGTAGTGATGACCGAAGACGGGCGCATCATTGAAGTGCAGGGGACGGCAGAAGGCGAGCCGTTCACCCATGAAGAGCTACTCATCTTGTTGGCTCTGGCCCGAGGGGGAATCGAATCCATTGTAGCGACGCAGAAGGCGGCGCTGGCAAACTGA", - "dna_sequence_length": 717, - "id": "CDS_3590", - "location": [ - [ - "NC_000913", - 3816549, - "-", - 669 - ], - [ - "NC_000913", - 3815881, - "-", - 48 - ] - ], - "md5": "fd773addd7698448ea4d5c9a2863dcff", - "parent_gene": "", - "protein_md5": "d919dde298c1e7122071e92d07448352", - "protein_translation": "MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWITAEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAVDLKALGEFTITLDCDVLQADGGTRTASITGACVALVDALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAVCDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLILLALARGGIESIVATQKAALAN", - "protein_translation_length": 238, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23839" - ], - [ - "gene_synonym", - "yicC" - ], - [ - "gene_synonym", - "ASAP:ABE-0011913" - ], - [ - "gene_synonym", - "NP_418101.1" - ], - [ - "gene_synonym", - "orfX" - ], - [ - "gene_synonym", - "JW3619" - ], - [ - "gene_synonym", - "ECK3634" - ], - [ - "gene_synonym", - "EcoGene:EG11192" - ], - [ - "gene_synonym", - "GI:16131515" - ], - [ - "gene_synonym", - "b3644" - ], - [ - "gene_synonym", - "GeneID:948154" - ] - ], - "dna_sequence": "ATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAATGGGGGAGCGCAACCTGGGAAATGCGCTCGGTAAACCAGCGTTATCTGGAAACTTACTTTCGTCTGCCGGAGCAGTTCCGTAGCCTTGAACCTGTCGTTCGCGAGCGTATTCGTTCTCGCCTGACGCGCGGTAAAGTGGAATGTACCCTGCGCTATGAGCCAGATGTTAGCGCGCAAGGTGAGCTGATCCTCAACGAAAAACTGGCTAAACAGCTGGTAACTGCCGCGAACTGGGTAAAAATGCAGAGTGACGAAGGGGAAATCAACCCGGTTGATATTCTACGCTGGCCGGGCGTGATGGCAGCCCAGGAGCAGGATCTTGACGCCATTGCCGCTGAAATTCTCGCGGCGCTGGATGGTACGCTGGACGACTTTATTGTCGCGCGCGAAACCGAAGGTCAGGCACTGAAAGCATTGATCGAGCAGCGTCTGGAAGGCGTCACCGCCGAAGTGGTCAAAGTCCGCTCCCATATGCCGGAAATCCTGCAATGGCAGCGTGAGCGTCTGGTCGCGAAGCTGGAAGATGCTCAGGTGCAACTGGAAAACAACCGTCTGGAGCAGGAACTGGTTCTGCTGGCACAACGAATTGACGTTGCCGAAGAACTGGATCGCCTCGAAGCGCATGTCAAAGAGACCTACAACATTCTGAAGAAAAAAGAAGCGGTTGGTCGTCGTCTGGATTTTATGATGCAGGAGTTCAACCGCGAGTCGAACACTCTTGCGTCGAAGTCTATCAATGCCGAAGTGACAAACTCCGCCATCGAGCTGAAAGTGTTGATTGAGCAGATGCGCGAGCAGATTCAGAACATCGAATAA", - "dna_sequence_length": 864, - "functions": [ - "UPF0701 family protein" - ], - "id": "CDS_3591", - "location": [ - [ - "NC_000913", - 3816676, - "+", - 864 - ] - ], - "md5": "e3e928b75d7278f5423080e1ea47f25f", - "parent_gene": "", - "protein_md5": "10ad4b48fceee46064d5710b2cf281c5", - "protein_translation": "MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRSLEPVVRERIRSRLTRGKVECTLRYEPDVSAQGELILNEKLAKQLVTAANWVKMQSDEGEINPVDILRWPGVMAAQEQDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRLEGVTAEVVKVRSHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVLLAQRIDVAEELDRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLIEQMREQIQNIE", - "protein_translation_length": 287, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011918" - ], - [ - "gene_synonym", - "GI:90111626" - ], - [ - "gene_synonym", - "dinD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23840" - ], - [ - "gene_synonym", - "orfY" - ], - [ - "gene_synonym", - "yicD" - ], - [ - "gene_synonym", - "EcoGene:EG11193" - ], - [ - "gene_synonym", - "ECK3635" - ], - [ - "gene_synonym", - "NP_418102.2" - ], - [ - "gene_synonym", - "GeneID:948153" - ], - [ - "gene_synonym", - "pcsA" - ], - [ - "gene_synonym", - "b3645" - ], - [ - "gene_synonym", - "JW3620" - ] - ], - "dna_sequence": "ATGAACGAACATCATCAACCTTTTGAAGAGATAAAACTGATTAATGCAAACGGAGCAGAACAATGGTCAGCAAGACAACTTGGGAAACTACTGGGTTATTCAGAGTATCGTCACTTTATACCTGTATTAACGCGCGCCAAAGAAGCCTGTGAGAACAGTGGTCACACAATTGATGACCATTTCGAGGAGATCCTCGATATGGTCAAAATTGGCTCAAATGCCAAAAGAGCATTAAAAGACATCGTACTCTCCCGCTATGCCTGTTACCTGGTAGTACAAAACGGCGACCCTGCGAAACCGGTCATTGCGGCAGGGCAGACTTATTTTGCTATCCAGACCCGACGGCAGGAGCTTGCTGACGATGAAGCATTTAAGCAACTTCGTGAAGACGAAAAGCGTCTGTTTCTGAGAAATGAGTTGAAAGAACATAACAAACAATTGGTTGAGGCAGCACAGCAAGCTGGGGTAGCGACAGCTACTGATTTCGCCATATTTCAGAATCATGGTTACCAGGGGCTGTATGGTGGATTAGATCAGAAAGCTATTCATCAGCGGAAGGGGCTGAAAAAGAATCAGAAGATCCTGGATCATATGGGTTCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAGAAGAAAAACTCAAGCGGGATGGCGTGAATTCAAAACAGCAAGCAAACACCACACACTTTGACGTGGGTCGCAAGGTGAGGCAAACCATTCAGGAACTTGGCGGAACCATGCCTGAGGAGTTGCCGACCCCGCAGGTCAGCATCAAGCAGTTGGAAAACAGTGTAAAAATTACAGAGAAGAAATAG", - "dna_sequence_length": 825, - "functions": [ - "DNA damage-inducible protein" - ], - "id": "CDS_3592", - "location": [ - [ - "NC_000913", - 3817760, - "+", - 825 - ] - ], - "md5": "c9149be218e6a000a26d93b179f924a4", - "parent_gene": "", - "protein_md5": "48a464c75fdda7178a0dfb7ffd2d4f65", - "protein_translation": "MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK", - "protein_translation_length": 274, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111627" - ], - [ - "gene_synonym", - "yicG" - ], - [ - "gene_synonym", - "ASAP:ABE-0011921" - ], - [ - "gene_synonym", - "GeneID:948165" - ], - [ - "gene_synonym", - "ECK3636" - ], - [ - "gene_synonym", - "EcoGene:EG11683" - ], - [ - "gene_synonym", - "NP_418103.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGM2" - ], - [ - "gene_synonym", - "b3646" - ], - [ - "gene_synonym", - "JW3621" - ] - ], - "dna_sequence": "ATGCTGTTACACATTTTGTATTTGGTTGGCATTACTGCCGAAGCCATGACGGGGGCGCTGGCGGCCGGACGACGGCGCATGGATACATTTGGCGTAATTATTATTGCGACCGCCACCGCAATTGGCGGAGGGTCAGTGCGCGATATTCTGCTGGGCCACTATCCGCTCGGCTGGGTCAAACACCCGGAATATGTGATTATCGTCGCTACCGCCGCAGTACTCACCACTATCGTTGCTCCTGTAATGCCTTACCTGCGCAAAGTGTTTCTGGTGCTCGATGCGCTCGGACTGGTGGTCTTTTCTATCATCGGGGCACAGGTTGCACTGGATATGGGGCACGGCCCAATTATTGCCGTTGTCGCGGCGGTAACCACCGGCGTGTTTGGCGGCGTTTTGCGCGATATGTTCTGTAAACGTATCCCACTGGTATTCCAGAAAGAGTTGTATGCCGGTGTCTCATTTGCCTCCGCCGTGCTGTACATCGCGCTGCAACACTATGTTTCTAACCATGATGTGGTAATTATCTCCACCCTGGTATTCGGCTTTTTTGCCCGCTTACTGGCGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAA", - "dna_sequence_length": 618, - "functions": [ - "UPF0126 family inner membrane protein" - ], - "id": "CDS_3593", - "location": [ - [ - "NC_000913", - 3818874, - "+", - 618 - ] - ], - "md5": "6fb4c9c35fd7f8a0a405bc7fb336a933", - "parent_gene": "", - "protein_md5": "65fb447cec3050795b513dd9a2f962e2", - "protein_translation": "MLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVKHPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSIIGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLYIALQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH", - "protein_translation_length": 205, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ligB" - ], - [ - "gene_synonym", - "yicF" - ], - [ - "gene_synonym", - "NP_418104.2" - ], - [ - "gene_synonym", - "GI:90111628" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25772" - ], - [ - "gene_synonym", - "EcoGene:EG11334" - ], - [ - "gene_synonym", - "ASAP:ABE-0011923" - ], - [ - "gene_synonym", - "GeneID:948164" - ], - [ - "gene_synonym", - "ECK3637" - ], - [ - "gene_synonym", - "JW3622" - ], - [ - "gene_synonym", - "b3647" - ] - ], - "dna_sequence": "ATGAAAGTATGGATGGCGATATTAATAGGTATCTTGTGCTGGCAATCATCTGTGTGGGCGGTCTGTCCGGCCTGGTCGCCAGCCAGAGCACAGGAAGAAATTTCCCGCCTGCAACAGCAAATAAAACAGTGGGACGATGACTACTGGAAGGAAGGAAAAAGTGAGGTGGAAGACGGTGTTTACGATCAGTTAAGCGCCCGTCTTACGCAGTGGCAACGCTGCTTTGGGAGCGAGCCCCGCGACGTGATGATGCCGCCTTTAAATGGTGCGGTTATGCATCCGGTTGCCCATACGGGTGTACGCAAAATGGTGGATAAAAACGCATTAAGTCTGTGGATGCGAGAACGTAGCGATCTTTGGGTGCAGCCAAAAGTTGATGGCGTTGCGGTAACCCTGGTTTATCGGGACGGGAAACTGAACAAAGCAATCAGTCGCGGTAATGGCCTGAAAGGCGAGGACTGGACGCAGAAAGTTAGCTTAATTTCCGCTGTGCCGCAAACCGTTAGCGGGCCTTTAGCCAACAGTACGCTTCAGGGGGAAATATTTCTCCAGCGCGAGGGGCATATCCAACAACAAATGGGGGGAATAAATGCCCGCGCAAAAGTTGCTGGCTTGATGATGCGCCAGGACGATAGCGACACGCTGAATTCTCTGGGCGTTTTTGTCTGGGCATGGCCGGATGGACCGCAGTTAATGTCTGATCGTTTAAAAGAGCTGGCTACCGCAGGTTTTACTCTAACGCAGACGTATACCCGTGCGGTGAAAAATGCTGATGAAGTTGCGCGCGTACGCAATGAGTGGTGGAAAGCGGAATTACCCTTCGTCACCGATGGCGTAGTTGTACGAGCGGCGAAAGAGCCAGAATCCCGCCATTGGCTACCGGGCCAGGCAGAGTGGCTGGTGGCCTGGAAATATCAACCTGTAGCTCAGGTTGCCGAAGTGAAGGCAATTCAGTTTGCGGTGGGTAAGAGCGGTAAAATATCGGTGGTTGCGTCACTCGCACCTGTCATGCTGGATGATAAAAAAGTCCAGCGGGTGAATATTGGTTCCGTCAGGCGCTGGCAGGAGTGGGATATTGCGCCTGGTGATCAGATTCTCGTCAGCCTTGCCGGTCAGGGTATTCCTCGCATTGATGATGTGGTGTGGCGCGGTGCAGAACGTACAAAACCGACACCGCCAGAAAACCGCTTTAACTCGTTGACCTGCTACTTTGCTTCTGATGTTTGTCAGGAACAGTTCATTTCACGCTTAGTCTGGCTGGGGGCAAAACAGGTTCTTGGGCTGGATGGCATTGGTGAGGCCGGTTGGCGCGCGCTGCATCAGACTCATCGCTTTGAACATATCTTTTCCTGGCTTTTATTAACGCCAGAGCAATTACAGAACACGCCGGGGATCGCGAAAAGTAAAAGTGCGCAGCTATGGCATCAGTTTAATCTGGCTCGTAAGCAGCCTTTTACTCGCTGGGTGATGGCAATGGGAATACCGCTAACCCGGGCGGCGCTTAATGCCAGTGATGAACGGTCCTGGTCGCAACTTTTATTTAGCACGGAGCAGTTCTGGCAGCAGCTGCCGGGGACTGGATCGGGACGCGCCAGACAGGTTATTGAATGGAAGGAAAATGCGCAAATCAAGAAGCTGGGCAGTTGGCTGGCTGCCCAGCAGATCACAGGTTTTGAACCTTAG", 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"gene_synonym", - "NP_418105.1" - ], - [ - "gene_synonym", - "EcoGene:EG10965" - ], - [ - "gene_synonym", - "spoR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60546" - ], - [ - "gene_synonym", - "ASAP:ABE-0011930" - ], - [ - "gene_synonym", - "b3648" - ], - [ - "gene_synonym", - "GI:16131519" - ], - [ - "gene_synonym", - "GeneID:948163" - ], - [ - "gene_synonym", - "ECK3638" - ], - [ - "gene_synonym", - "JW3623" - ] - ], - "dna_sequence": "ATGGCTCAAGGCACGCTTTATATTGTTTCTGCCCCCAGTGGCGCGGGTAAATCCAGCCTGATTCAGGCTTTATTAAAAACCCAACCGTTGTATGACACCCAGGTTTCTGTTTCACACACCACACGCCAACCGCGTCCTGGTGAAGTCCACGGTGAACATTATTTCTTTGTTAATCATGATGAATTTAAAGAAATGATTAGCAGAGATGCGTTCCTCGAACACGCAGAAGTTTTTGGTAATTACTATGGCACTTCGCGTGAGGCCATTGAGCAAGTACTGGCGACCGGTGTCGATGTTTTTCTCGATATCGACTGGCAGGGCGCGCAGCAAATTCGCCAGAAGATGCCGCACGCGCGGAGTATCTTTATTTTACCGCCGTCCAAAATTGAACTGGACCGCCGTCTACGCGGTCGCGGTCAGGACAGCGAAGAGGTCATTGCAAAGCGTATGGCGCAAGCTGTTGCAGAAATGAGCCATTACGCCGAATATGATTATCTGATTGTGAATGATGACTTCGATACCGCGTTGACCGATTTGAAGACCATTATTCGCGCCGAACGTCTGCGCATGAGCCGCCAAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTTGGCAGACTGA", - "dna_sequence_length": 624, - "functions": [ - "guanylate kinase" - ], - "id": "CDS_3595", - "location": [ - [ - "NC_000913", - 3821428, - "+", - 624 - ] - ], - "md5": "6f0bdd852497044d5b3a5b45a7bdd7f7", - "parent_gene": "", - "protein_md5": "00a2e230767a7aebb667ea11577dad4b", - "protein_translation": "MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQKQRHDALISKLLAD", - "protein_translation_length": 207, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A800" - ], - [ - "gene_synonym", - "rpoZ" - ], - [ - "gene_synonym", - "spoS" - ], - [ - "gene_synonym", - "ASAP:ABE-0011933" - ], - [ - "gene_synonym", - "b3649" - ], - [ - "gene_synonym", - "GeneID:948160" - ], - [ - "gene_synonym", - "EcoGene:EG10899" - ], - [ - "gene_synonym", - "GI:16131520" - ], - [ - "gene_synonym", - "JW3624" - ], - [ - "gene_synonym", - "ECK3639" - ], - [ - "gene_synonym", - "NP_418106.1" - ] - ], - "dna_sequence": "ATGGCACGCGTAACTGTTCAGGACGCTGTAGAGAAAATTGGTAACCGTTTTGACCTGGTACTGGTCGCCGCGCGTCGCGCTCGTCAGATGCAGGTAGGCGGAAAGGATCCGCTGGTACCGGAAGAAAACGATAAAACCACTGTAATCGCGCTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAGGAACAGCAAGAGCAGGAAGCCGCTGAATTACAAGCCGTTACCGCTATTGCTGAAGGTCGTCGTTAA", - "dna_sequence_length": 276, - "functions": [ - "RNA polymerase, omega subunit" - ], - "id": "CDS_3596", - "location": [ - [ - "NC_000913", - 3822106, - "+", - 276 - ] - ], - "md5": "cf177e580672bab71e898337f4cb2549", - "parent_gene": "", - "protein_md5": "4181cf83cf26ea2fecc18adef347d76c", - "protein_translation": "MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR", - "protein_translation_length": 91, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10966" - ], - [ - "gene_synonym", - "ECK3640" - ], - [ - "gene_synonym", - "ASAP:ABE-0011935" - ], - [ - "gene_synonym", - "spoT" - ], - [ - "gene_synonym", - "GeneID:948159" - ], - [ - "gene_synonym", - "NP_418107.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG24" - ], - [ - "gene_synonym", - "GI:16131521" - ], - [ - "gene_synonym", - "JW3625" - ], - [ - "gene_synonym", - "b3650" - ] - ], - "dna_sequence": "TTGTATCTGTTTGAAAGCCTGAATCAACTGATTCAAACCTACCTGCCGGAAGACCAAATCAAGCGTCTGCGGCAGGCGTATCTCGTTGCACGTGATGCTCACGAGGGGCAAACACGTTCAAGCGGTGAACCCTATATCACGCACCCGGTAGCGGTTGCCTGCATTCTGGCCGAGATGAAACTCGACTATGAAACGCTGATGGCGGCGCTGCTGCATGACGTGATTGAAGATACTCCCGCCACCTACCAGGATATGGAACAGCTTTTTGGTAAAAGCGTCGCCGAGCTGGTAGAGGGGGTGTCGAAACTTGATAAACTCAAGTTCCGCGATAAGAAAGAGGCGCAGGCCGAAAACTTTCGCAAGATGATTATGGCGATGGTGCAGGATATCCGCGTCATCCTCATCAAACTTGCCGACCGTACCCACAACATGCGCACGCTGGGCTCACTTCGCCCGGACAAACGTCGCCGCATCGCCCGTGAAACTCTCGAAATTTATAGCCCGCTGGCGCACCGTTTAGGTATCCACCACATTAAAACCGAACTCGAAGAGCTGGGTTTTGAGGCGCTGTATCCCAACCGTTATCGCGTAATCAAAGAAGTGGTGAAAGCCGCGCGCGGCAACCGTAAAGAGATGATCCAGAAGATTCTTTCTGAAATCGAAGGGCGTTTGCAGGAAGCGGGAATACCGTGCCGCGTCAGTGGTCGCGAGAAGCATCTTTATTCGATTTACTGCAAAATGGTGCTCAAAGAGCAGCGTTTTCACTCGATCATGGACATCTACGCTTTCCGCGTGATCGTCAATGATTCTGACACCTGTTATCGCGTGCTGGGCCAGATGCACAGCCTGTACAAGCCGCGTCCGGGCCGCGTGAAAGACTATATCGCCATTCCAAAAGCGAACGGCTATCAGTCTTTGCACACCTCGATGATCGGCCCGCACGGTGTGCCGGTTGAGGTCCAGATCCGTACCGAAGATATGGACCAGATGGCGGAGATGGGTGTTGCCGCGCACTGGGCTTATAAAGAGCACGGCGAAACCAGTACTACCGCACAAATCCGCGCCCAGCGCTGGATGCAAAGCCTGCTGGAGCTGCAACAGAGCGCCGGTAGTTCGTTTGAATTTATCGAGAGCGTTAAATCCGATCTCTTCCCGGATGAGATTTACGTTTTCACACCGGAAGGGCGCATTGTCGAGCTGCCTGCCGGTGCAACGCCCGTCGACTTCGCTTATGCAGTGCATACCGATATCGGTCATGCCTGCGTGGGCGCACGCGTTGACCGCCAGCCTTACCCGCTGTCGCAGCCGCTTACCAGCGGTCAAACCGTTGAAATCATTACCGCTCCGGGCGCTCGCCCGAATGCCGCTTGGCTGAACTTTGTCGTTAGCTCGAAAGCGCGCGCCAAAATTCGTCAGTTGCTGAAAAACCTCAAGCGTGATGATTCTGTAAGCCTGGGCCGTCGTCTGCTCAACCATGCTTTGGGTGGTAGCCGTAAGCTGAATGAAATCCCGCAGGAAAATATTCAGCGCGAGCTGGATCGCATGAAGCTGGCAACGCTTGACGATCTGCTGGCAGAAATCGGACTTGGTAACGCAATGAGCGTGGTGGTCGCGAAAAATCTGCAACATGGGGACGCCTCCATTCCACCGGCAACCCAAAGCCACGGACATCTGCCCATTAAAGGTGCCGATGGCGTGCTGATCACCTTTGCGAAATGCTGCCGCCCTATTCCTGGCGACCCGATTATCGCCCACGTCAGCCCCGGTAAAGGTCTGGTGATCCACCATGAATCCTGCCGTAATATCCGTGGCTACCAGAAAGAGCCAGAGAAGTTTATGGCTGTGGAATGGGATAAAGAGACGGCGCAGGAGTTCATCACCGAAATCAAGGTGGAGATGTTCAATCATCAGGGTGCGCTGGCAAACCTGACGGCGGCAATTAACACCACGACTTCGAATATTCAAAGTTTGAATACGGAAGAGAAAGATGGTCGCGTCTACAGCGCCTTTATTCGTCTGACCGCTCGTGACCGTGTGCATCTGGCGAATATCATGCGCAAAATCCGCGTGATGCCAGACGTGATTAAAGTCACCCGAAACCGAAATTAA", 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"MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPGARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLNEIPQENIQRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQHGDASIPPATQSHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETAQEFITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTEEKDGRVYSAFIRLTARDRVHLANIMRKIRVMPDVIKVTRNRN", - "protein_translation_length": 702, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10967" - ], - [ - "gene_synonym", - "ECK3641" - ], - [ - "gene_synonym", - "ASAP:ABE-0011937" - ], - [ - "gene_synonym", - "spoU" - ], - [ - "gene_synonym", - "NP_418108.1" - ], - [ - "gene_synonym", - "GeneID:948161" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGJ2" - ], - [ - "gene_synonym", - "JW3626" - ], - [ - "gene_synonym", - "trmH" - ], - [ - "gene_synonym", - "GI:16131522" - ], - [ - "gene_synonym", - "b3651" - ] - ], - "dna_sequence": "ATGAACCCAACACGTTATGCACGCATCTGCGAAATGCTCGCCAGGCGGCAGCCTGATCTGACCGTCTGCATGGAGCAGGTCCACAAACCTCATAACGTTTCTGCGATTATTCGTACCGCAGATGCCGTTGGCGTACATGAAGTTCACGCCGTCTGGCCTGGTAGCCGCATGCGCACCATGGCTTCGGCAGCGGCGGGTAGTAACAGCTGGGTACAGGTGAAAACACACCGCACCATTGGCGATGCCGTCGCTCATCTCAAAGGCCAGGGCATGCAGATTCTGGCAACCCATCTTTCTGATAACGCTGTCGATTTCCGCGAAATTGATTACACTCGCCCGACCTGCATTTTGATGGGACAGGAGAAAACGGGCATCACGCAGGAAGCATTGGCCCTGGCGGATCAGGACATCATCATTCCGATGATCGGCATGGTGCAGTCGCTGAATGTTTCCGTTGCCTCAGCCCTCATTCTTTACGAAGCCCAGCGTCAGCGGCAAAATGCAGGCATGTACCTGCGTGAAAACAGCATGTTGCCGGAAGCAGAGCAACAACGCCTGTTGTTTGAAGGCGGCTATCCGGTGCTGGCGAAAGTCGCAAAACGCAAAGGCCTGCCTTATCCCCACGTCAATCAGCAAGGCGAGATCGAAGCTGATGCCGACTGGTGGGCTACTATGCAGGCTGCAGGGTAA", - "dna_sequence_length": 690, - "functions": [ - "tRNA mG18-2'-O-methyltransferase, SAM-dependent" - ], - "id": "CDS_3598", - "location": [ - [ - "NC_000913", - 3824515, - "+", - 690 - ] - ], - "md5": "c1133a91f29edc50cb2d82a40a112644", - "parent_gene": "", - "protein_md5": "4adc569f0aefe88b64aeed76bccea176", - "protein_translation": "MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYEAQRQRQNAGMYLRENSMLPEAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEADADWWATMQAAG", - "protein_translation_length": 229, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "radC" - ], - [ - "gene_synonym", - "ECK3642" - ], - [ - "gene_synonym", - "ASAP:ABE-0011939" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24230" - ], - [ - "gene_synonym", - "recG" - ], - [ - "gene_synonym", - "spoV" - ], - [ - "gene_synonym", - "EcoGene:EG10829" - ], - [ - "gene_synonym", - "NP_418109.1" - ], - [ - "gene_synonym", - "GeneID:948162" - ], - [ - "gene_synonym", - "JW3627" - ], - [ - "gene_synonym", - "GI:16131523" - ], - [ - "gene_synonym", - "b3652" - ] - ], - "dna_sequence": "ATGAAAGGTCGCCTGTTAGATGCTGTCCCACTCAGTTCCCTAACGGGCGTTGGCGCAGCACTTAGTAACAAACTGGCGAAAATCAACCTGCATACCGTGCAGGATCTACTCTTACACCTTCCCCTGCGCTACGAAGATCGCACCCATCTCTACCCCATCGGAGAACTACTGCCGGGCGTTTATGCCACGGTGGAAGGCGAAGTGCTGAACTGCAATATCTCCTTCGGCGGTCGGCGGATGATGACCTGCCAGATCAGCGACGGTTCCGGCATCCTCACCATGCGCTTTTTCAATTTCAGCGCGGCAATGAAAAATAGCCTGGCGGCGGGCCGCCGTGTACTGGCTTATGGCGAAGCAAAGCGCGGTAAATATGGTGCGGAGATGATCCACCCGGAATACCGCGTGCAGGGCGATCTCAGCACGCCAGAATTACAGGAAACGCTCACGCCGGTTTATCCAACAACGGAAGGCGTAAAGCAGGCCACGCTGCGTAAATTAACCGACCAGGCGCTGGATCTGCTCGACACCTGCGCCATTGAAGAACTCCTGCCGCCGGAACTGTCACAAGGAATGATGACGCTACCGGAAGCGTTGCGCACTTTGCACCGCCCGCCACCGACGCTACAGCTTAGCGATCTGGAAACCGGGCAGCATCCGGCGCAACGTCGTCTGATTCTGGAAGAACTGCTGGCGCACAACCTCAGCATGTTAGCCTTACGTGCCGGAGCACAGCGTTTTCATGCCCAGCCGCTGAGCGCCAATGACACGCTGAAAAATAAACTCCTCGCCGCCTTACCGTTCAAGCCAACGGGCGCACAGGCACGCGTAGTGGCGGAGATCGAGCGCGATATGGCGCTGGATGTGCCGATGATGCGTCTGGTGCAGGGCGATGTAGGTTCCGGTAAAACGCTGGTCGCCGCCCTCGCCGCGTTGCGTGCGATTGCCCACGGCAAACAGGTAGCATTGATGGCACCAACCGAATTACTCGCCGAGCAGCACGCCAATAACTTCCGCAACTGGTTTGCACCGCTCGGTATCGAAGTGGGCTGGCTCGCCGGTAAGCAGAAAGGTAAAGCACGGCTGGCACAGCAGGAAGCCATCGCCAGCGGTCAGGTGCAGATGATTGTCGGTACACACGCCATCTTCCAGGAACAGGTGCAGTTTAACGGCCTGGCGCTGGTGATTATCGACGAACAGCATCGTTTTGGCGTGCATCAGCGTCTGGCATTGTGGGAGAAAGGCCAGCAGCAGGGCTTCCATCCGCATCAGTTGATCATGACCGCCACGCCGATCCCCCGCACGCTGGCAATGACTGCGTATGCCGATCTCGATACCTCGGTGATAGATGAGCTGCCGCCAGGCCGCACGCCAGTGACTACGGTCGCTATTCCTGATACCCGCCGTACCGACATCATTGACCGCGTGCACCACGCCTGCATAACTGAAGGTCGTCAGGCATACTGGGTTTGTACGTTGATTGAAGAGTCGGAATTGCTGGAAGCGCAGGCGGCGGAAGCTACCTGGGAAGAGTTGAAACTGGCGCTACCAGAGTTGAACGTTGGCCTGGTACACGGGCGGATGAAACCTGCCGAGAAACAGGCGGTGATGGCGTCGTTTAAACAAGGTGAGCTACACCTGCTGGTTGCCACAACCGTTATTGAAGTCGGCGTTGATGTGCCTAACGCCAGTCTGATGATTATCGAAAACCCGGAGCGTCTGGGTCTGGCGCAGTTACACCAGCTGCGCGGGCGCGTAGGTCGTGGCGCGGTGGCTTCTCACTGCGTGCTGCTCTACAAAACGCCGCTTTCTAAAACGGCGCAAATTCGCCTGCAAGTGCTGCGCGACAGTAACGACGGTTTTGTGATTGCGCAAAAAGATCTGGAGATTCGCGGCCCTGGCGAATTGTTAGGCACGCGTCAGACGGGTAATGCTGAATTTAAAGTGGCGGATTTACTGCGCGATCAGGCGATGATCCCGGAAGTTCAGCGCCTGGCACGCCATATTCACGAACGTTACCCACAACAGGCAAAAGCCCTGATAGAACGCTGGATGCCGGAGACGGAACGTTACTCGAATGCGTAA", - "dna_sequence_length": 2082, - "functions": [ - "ATP-dependent DNA helicase" - ], - "id": "CDS_3599", - "location": [ - [ - "NC_000913", - 3825210, - "+", - 2082 - ] - ], - "md5": "62b6749a0f5686060ede43d537a5d23f", - "parent_gene": "", - "protein_md5": "011bb79012a0068ffc132a68870f32da", - "protein_translation": "MKGRLLDAVPLSSLTGVGAALSNKLAKINLHTVQDLLLHLPLRYEDRTHLYPIGELLPGVYATVEGEVLNCNISFGGRRMMTCQISDGSGILTMRFFNFSAAMKNSLAAGRRVLAYGEAKRGKYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGVKQATLRKLTDQALDLLDTCAIEELLPPELSQGMMTLPEALRTLHRPPPTLQLSDLETGQHPAQRRLILEELLAHNLSMLALRAGAQRFHAQPLSANDTLKNKLLAALPFKPTGAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFAPLGIEVGWLAGKQKGKARLAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRTDIIDRVHHACITEGRQAYWVCTLIEESELLEAQAAEATWEELKLALPELNVGLVHGRMKPAEKQAVMASFKQGELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPLSKTAQIRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPEVQRLARHIHERYPQQAKALIERWMPETERYSNA", - "protein_translation_length": 693, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AER8" - ], - [ - "gene_synonym", - "ECK3643" - ], - [ - "gene_synonym", - "ASAP:ABE-0011941" - ], - [ - "gene_synonym", - "GI:16131524" - ], - [ - "gene_synonym", - "gltS" - ], - [ - "gene_synonym", - "GeneID:948166" - ], - [ - "gene_synonym", - "NP_418110.1" - ], - [ - "gene_synonym", - "JW3628" - ], - [ - "gene_synonym", - "gltC" - ], - [ - "gene_synonym", - "b3653" - ], - [ - "gene_synonym", - "EcoGene:EG10406" - ] - ], - "dna_sequence": "ATGTTTCATCTCGATACTTTAGCAACGCTTGTTGCCGCAACGCTGACGTTGCTGCTCGGGCGTAAGTTGGTCCATTCCGTCTCCTTTTTGAAGAAATACACCATACCGGAACCTGTTGCGGGTGGTTTGTTGGTGGCGCTGGCGCTACTAGTACTGAAAAAAAGCATGGGCTGGGAAGTCAACTTTGATATGTCCCTGCGCGATCCGTTAATGCTGGCTTTCTTCGCCACCATTGGCCTGAACGCCAACATTGCCAGTTTGCGTGCCGGTGGGCGTGTGGTTGGCATCTTCTTGATTGTGGTTGTTGGTCTGTTGGTGATGCAAAATGCCATTGGCATTGGTATGGCTAGCTTGTTAGGGCTTGATCCGCTGATGGGGCTGTTGGCCGGTTCTATTACTCTTTCCGGCGGTCACGGTACGGGCGCTGCGTGGAGTAAATTGTTCATTGAACGTTATGGCTTCACCAATGCGACGGAAGTGGCGATGGCCTGTGCAACGTTCGGTCTGGTGCTGGGCGGCTTGATTGGCGGTCCGGTGGCGCGCTATCTGGTGAAACACTCCACCACGCCGAACGGTATTCCGGATGACCAGGAAGTCCCGACGGCGTTTGAAAAGCCGGATGTGGGACGCATGATCACCTCGTTGGTGCTGATTGAAACTATCGCGCTGATTGCTATCTGCCTGACGGTGGGGAAAATTGTTGCGCAACTTTTGGCTGGCACTGCTTTTGAACTGCCGACCTTCGTCTGTGTACTGTTTGTTGGCGTGATTCTGAGCAACGGTCTGTCAATAATGGGCTTTTACCGCGTCTTTGAGCGTGCGGTATCCGTGCTGGGTAACGTAAGCTTGTCGTTGTTCCTGGCGATGGCGTTGATGGGGCTGAAACTGTGGGAGCTGGCTTCGCTGGCGCTGCCGATGCTGGCGATTCTGGTGGTACAGACCATCTTCATGGCGTTGTATGCCATCTTCGTTACCTGGCGCATGATGGGCAAAAACTACGATGCGGCAGTGCTGGCTGCGGGTCACTGTGGTTTTGGCCTCGGTGCAACGCCAACGGCAATCGCCAACATGCAGGCGATCACTGAACGCTTTGGCCCGTCGCACATGGCGTTTTTGGTGGTGCCGATGGTCGGTGCGTTCTTTATCGATATCGTCAATGCGCTGGTAATTAAGTTGTATTTGATGTTGCCGATTTTTGCCGGTTAA", - "dna_sequence_length": 1206, - "functions": [ - "glutamate transporter" - ], - "id": "CDS_3600", - "location": [ - [ - "NC_000913", - 3828665, - "-", - 1206 - ] - ], - "md5": "16329b7e4a987138512e5e7e2224cdd8", - "parent_gene": "", - "protein_md5": "624a1afab8fd261af2b7b3a7832b27f8", - "protein_translation": "MFHLDTLATLVAATLTLLLGRKLVHSVSFLKKYTIPEPVAGGLLVALALLVLKKSMGWEVNFDMSLRDPLMLAFFATIGLNANIASLRAGGRVVGIFLIVVVGLLVMQNAIGIGMASLLGLDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFTNATEVAMACATFGLVLGGLIGGPVARYLVKHSTTPNGIPDDQEVPTAFEKPDVGRMITSLVLIETIALIAICLTVGKIVAQLLAGTAFELPTFVCVLFVGVILSNGLSIMGFYRVFERAVSVLGNVSLSLFLAMALMGLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYDAAVLAAGHCGFGLGATPTAIANMQAITERFGPSHMAFLVVPMVGAFFIDIVNALVIKLYLMLPIFAG", - "protein_translation_length": 401, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGM9" - ], - [ - "gene_synonym", - "ECK3644" - ], - [ - "gene_synonym", - "EcoGene:EG11194" - ], - [ - "gene_synonym", - "xanP" - ], - [ - "gene_synonym", - "yicE" - ], - [ - "gene_synonym", - "ASAP:ABE-0011946" - ], - [ - "gene_synonym", - "GeneID:948172" - ], - [ - "gene_synonym", - "JW3629" - ], - [ - "gene_synonym", - "b3654" - ], - [ - "gene_synonym", - "GI:16131525" - ], - [ - "gene_synonym", - "NP_418111.1" - ] - ], - "dna_sequence": "ATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGGGTTTACCGGCACAAGACACGCAACACATTATTAGTATGTCGCTGTTTGCCTCCGGTGTGGCATCGATTATTCAAATTAAGGCCTGGGGTCCGGTTGGCTCCGGGCTGTTGTCTATTCAGGGCACCAGCTTCAACTTTGTTGCCCCGCTGATTATGGGCGGTACCGCGCTGAAAACCGGTGGTGCTGATGTTCCTACCATGATGGCGGCTTTGTTCGGCACGTTGATGCTGGCAAGTTGCACCGAGATGGTGATCTCCCGCGTTCTGCATCTGGCGCGCCGCATTATTACGCCGCTGGTTTCTGGCGTTGTGGTGATGATTATCGGCCTGTCGCTAATTCAGGTTGGGTTAACGTCCATTGGCGGCGGTTACGCAGCCATGAGCGATAACACCTTCGGCGCACCGAAAAATCTGCTGCTGGCAGGCGTGGTCTTAGCCTTAATTATCCTGCTTAACCGTCAACGTAACCCTTACTTACGCGTGGCCTCACTGGTAATTGCGATGGCGGCCGGATATGCGCTGGCGTGGTTTATGGGCATGTTGCCAGAAAGCAACGAACCTATGACGCAAGAACTGATTATGGTGCCAACGCCGCTCTATTACGGTCTTGGCATTGAATGGAGTCTGCTGCTGCCGCTGATGCTGGTCTTTATGATCACTTCGCTGGAAACCATTGGCGATATCACGGCGACCTCTGACGTTTCCGAACAGCCAGTGTCCGGTCCGCTGTACATGAAACGCCTGAAAGGCGGCGTGCTGGCAAACGGCCTGAACTCGTTTGTTTCGGCGGTGTTTAACACCTTCCCGAACTCCTGCTTCGGGCAAAACAACGGAGTGATCCAGTTGACTGGTGTTGCCAGCCGCTATGTCGGTTTTGTCGTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGGCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCCTGAATGGCTGAAAAACCTGCTCTCCTCCGGGATCGCCGCGGGCGGTATTACTGCCATCGTGCTGAATCTGATTTTCCCACCAGAAAAACAGTAA", - "dna_sequence_length": 1392, - "functions": [ - "xanthine permease" - ], - "id": "CDS_3601", - "location": [ - [ - "NC_000913", - 3828945, - "+", - 1392 - ] - ], - "md5": "e997b017415638f1414220e786873124", - "parent_gene": "", - "protein_md5": "3ff4cae3eab8617935adc1d51c352d85", - "protein_translation": "MSVSTLESENAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLLAMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKAWGPVGSGLLSIQGTSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVISRVLHLARRIITPLVSGVVVMIIGLSLIQVGLTSIGGGYAAMSDNTFGAPKNLLLAGVVLALIILLNRQRNPYLRVASLVIAMAAGYALAWFMGMLPESNEPMTQELIMVPTPLYYGLGIEWSLLLPLMLVFMITSLETIGDITATSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCFGQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATLVMFGTIAASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPLILQFAPEWLKNLLSSGIAAGGITAIVLNLIFPPEKQ", - "protein_translation_length": 463, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418112.1" - ], - [ - "gene_synonym", - "ECK3645" - ], - [ - "gene_synonym", - "yicH" - ], - [ - "gene_synonym", - "GeneID:948171" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31433" - ], - [ - "gene_synonym", - "ASAP:ABE-0011949" - ], - [ - "gene_synonym", - "EcoGene:EG11684" - ], - [ - "gene_synonym", - "b3655" - ], - [ - "gene_synonym", - "JW3630" - ], - [ - "gene_synonym", - "GI:16131526" - ] - ], - "dna_sequence": "ATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGCGATCGCTGGCCTCTATTTTCTTCTGCAAACCCGCTGGGGAGCAGAACATATCAGCGCATGGGTTTCCGAGAATAGCGACTATCATCTGGCCTTCGGGGCGATGGATCACCGTTTTTCCGCGCCATCTCATATCGTGCTGGAGAACGTCACGTTTGGTCGTGATGGCCAGCCCGCGACCCTGGTGGCCAAAAGTGTCGACATTGCGCTAAGCAGTCGGCAACTGACCGAACCACGCCATGTCGATACCATCCTGCTGGAAAACGGGACGCTGAATCTCACCGACCAGACCGCGCCGCTACCGTTCAAAGCCGATCGTCTGCAACTGCGTGATATGGCGTTTAATAGCCCGAATAGCGAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCGTAGTTCCGTGGTCACCAAAAGCCGGTAAAGTGCTGGGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCATGGCGGATATACGTCTACAAAGCGAAAAATCGCTAACCGACTTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAAGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTATGGTCAGAACGTCAGGGAACTGGCTGCGTGACGGGAAAACGTTGATCCTTGATGATGCGGCAATTGCCGGGCTGGAATATACCTTGCCGAAAAACTGGCAACAGTTGTGGATGGAAACGACACCCGGTTGGTTAAACAGCCTGCAACTGAAGAGATTTAGCGCCAGCCGCAATCTGATCATTGATATCGACCCTGACTTCCCGTGGCAGCTCACCGCGCTCGATGGTTACGGTGCCAACCTGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAGTGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTCGCCCGTCGCTGGCGCTGACCGCCAACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCCAGTGTTTCACAAACGCCACAACGTCAGACACATATCAGCCTGAATGGACGCGGTGTGCCGGTGAATATTTTGCAACAGTGGGGATGGCCTGAATTACCGTTGACTGGCGACGGCAATATTCAGCTTACCGCCAGTGGCGATATTCAGGCCAATGTCCCGTTGAAACCTACGGTTAGCGGGCAATTGCATGCCGTGAACGCCGCAAAGCAGCAAGTGACTCAAACCATGAATGCTGGCATCGTTTCCAGCGGTGAAGTTACATCGACGGAGCCGGTGCGGTAA", - "dna_sequence_length": 1710, - "functions": [ - "putative inner membrane-anchored periplasmic AsmA family protein" - ], - "id": "CDS_3602", - "location": [ - [ - "NC_000913", - 3830457, - "+", - 1710 - ] - ], - "md5": "dfc790f7fd5fc89b4c21d80b60f61ac3", - "parent_gene": "", - "protein_md5": "f54b4ac02d6862e1b67a49108a92661b", - "protein_translation": "MKFIGKLLLYILIALLVAIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVLGTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINTEFSPQGVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPELPLTGDGNIQLTASGDIQANVPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSTEPVR", - "protein_translation_length": 569, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3646" - ], - [ - "gene_synonym", - "yicI" - ], - [ - "gene_synonym", - "NP_418113.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31434" - ], - [ - "gene_synonym", - "ASAP:ABE-0011951" - ], - [ - "gene_synonym", - "EcoGene:EG11685" - ], - [ - "gene_synonym", - "b3656" - ], - [ - "gene_synonym", - "JW3631" - ], - [ - "gene_synonym", - "GeneID:948169" - ], - [ - "gene_synonym", - "GI:16131527" - ] - ], - "dna_sequence": "ATGAAAATTAGCGATGGAAACTGGTTGATTCAACCTGGCCTCAATTTGATTCACCCGCTTCAGGTGTTCGAGGTTGAACAGCAGGATAATGAAATGGTGGTCTATGCTGCCCCCCGTGATGTGCGTGAACGTACCTGGCAGCTTGATACGCCTTTATTTACGTTGCGCTTTTTCTCCCCACAGGAAGGTATTGTCGGTGTGCGGATTGAGCATTTTCAGGGGGCGCTGAATAACGGTCCTCATTATCCGCTCAATATTTTGCAGGACGTGAAGGTCACAATCGAAAACACAGAACGTTATGCTGAGTTTAAAAGTGGCAACTTAAGCGCGCGTGTCAGCAAAGGTGAGTTCTGGTCACTGGATTTTCTGCGCAACGGCGAACGTATTACCGGTAGTCAGGTGAAAAATAATGGCTACGTGCAGGACACGAATAATCAACGCAATTATATGTTTGAGCGGCTTGATCTTGGCGTTGGCGAAACAGTTTACGGTCTGGGAGAGCGCTTTACTGCCCTGGTGCGCAATGGCCAGACGGTAGAGACCTGGAACCGGGACGGCGGCACAAGTACTGAACAGGCGTATAAAAATATCCCGTTCTACATGACTAACCGTGGTTATGGGGTACTGGTCAATCATCCCCAGTGTGTCTCTTTTGAAGTGGGATCGGAGAAAGTCTCCAAAGTGCAGTTCAGCGTTGAGAGTGAATATCTCGAATACTTTGTTATCGACGGCCCGACGCCGAAAGCGGTACTTGATCGTTATACCCGCTTTACTGGTCGTCCGGCGCTGCCGCCCGCGTGGTCCTTCGGCCTGTGGCTAACCACTTCATTTACCACCAACTACGACGAAGCGACGGTAAACAGCTTTATCGATGGTATGGCGGAACGCAATCTGCCGCTGCATGTTTTCCACTTTGACTGTTTCTGGATGAAAGCCTTCCAGTGGTGCGATTTTGAGTGGGACCCGCTGACTTTCCCTGACCCGGAAGGGATGATCCGCCGCCTGAAAGCGAAAGGACTGAAAATCTGCGTCTGGATTAACCCCTATATCGGTCAAAAATCCCCCGTCTTTAAAGAGTTACAAGAGAAAGGCTATTTACTCAAACGCCCGGACGGTTCGCTATGGCAGTGGGATAAATGGCAGCCAGGTCTGGCGATTTATGACTTTACCAATCCGGATGCCTGCAAATGGTACGCCGACAAACTGAAAGGTCTGGTCGCGATGGGCGTTGATTGCTTTAAGACCGACTTTGGCGAACGTATCCCAACTGATGTTCAGTGGTTTGACGGTTCCGATCCGCAGAAAATGCATAACCATTATGCGTACATCTACAACGAACTGGTGTGGAACGTGCTCAAGGACACCGTTGGTGAGGAAGAAGCTGTCTTGTTTGCCCGCTCGGCCTCCGTCGGTGCGCAGAAATTCCCGGTACACTGGGGTGGCGATTGTTACGCTAACTACGAATCAATGGCGGAAAGCCTGCGCGGTGGTTTGTCTATTGGCCTTTCAGGTTTTGGCTTCTGGAGCCACGATATCGGCGGCTTTGAAAATACCGCTCCGGCGCACGTTTACAAACGCTGGTGCGCGTTTGGTTTGCTCTCCAGCCATAGCCGTTTACACGGTAGCAAATCTTATCGTGTGCCGTGGGCCTACGATGATGAGTCCTGTGATGTGGTGCGCTTCTTCACGCAACTGAAATGCCGCATGATGCCGTATCTGTATCGTGAAGCTGCGCGTGCGAACGCGCGGGGTACGCCGATGATGCGGGCCATGATGATGGAGTTCCCGGACGATCCGGCTTGTGATTACCTTGACCGTCAATACATGTTAGGCGACAACGTGATGGTTGCGCCGGTGTTCACTGAAGCGGGCGATGTGCAGTTCTACCTGCCGGAAGGTCGCTGGACACACCTGTGGCACAACGATGAACTCGACGGTAGTCGCTGGCATAAACAGCAGCACGGCTTCCTGAGTCTGCCCGTTTATGTGCGTGATAACACTCTACTGGCGCTGGGCAACAACGATCAACGTCCCGATTACGTGTGGCACGAAGGCACGGCATTCCACCTCTTCAATCTGCAAGACGGGCATGAAGCCGTCTGTGAAGTGCCCGCTGCTGACGGATCGGTGATCTTTACTTTAAAAGCAGCACGTACTGGCAACACGATTACTGTGACTGGTGCGGGCGAGGCGAAGAACTGGACACTGTGCCTGCGCAATGTTGTGAAAGTAAATGGTCTGCAAGACGGTTCGCAGGCTGAAAGTGAGCAGGGGCTGGTGGTGAAGCCTCAAGGGAATGCGCTGACAATTACGTTGTAA", - "dna_sequence_length": 2319, - "functions": [ - "putative alpha-glucosidase" - ], - "id": "CDS_3603", - "location": [ - [ - "NC_000913", - 3834537, - "-", - 2319 - ] - ], - "md5": "a5f9ab8e97056d493e615a84b120ce3d", - "parent_gene": "", - "protein_md5": "1b6d2d7e1bca3eaf1ef7acb492e59839", - "protein_translation": "MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQDTNNQRNYMFERLDLGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL", - "protein_translation_length": 772, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3647" - ], - [ - "gene_synonym", - "yicJ" - ], - [ - "gene_synonym", - "EcoGene:EG11686" - ], - [ - "gene_synonym", - "JW5939" - ], - [ - "gene_synonym", - "GI:90111629" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31435" - ], - [ - "gene_synonym", - "ASAP:ABE-0011953" - ], - [ - "gene_synonym", - "b3657" - ], - [ - "gene_synonym", - "NP_418114.4" - ], - [ - "gene_synonym", - "GeneID:948168" - ] - ], - "dna_sequence": "ATGAAGAGTGAAGTGTTGTCCGTTAAAGAGAAAATTGGTTATGGCATGGGAGACGCCGCCAGCCACATTATTTTCGATAACGTAATGTTATATATGATGTTCTTTTATACCGATATTTTTGGCATTCCTGCCGGTTTTGTCGGAACCATGTTTTTGGTCGCTCGTGCACTGGATGCGATTTCCGATCCTTGCATGGGGTTGTTGGCCGATCGAACGCGCTCTCGCTGGGGTAAATTTCGTCCGTGGGTACTGTTTGGCGCACTGCCATTCGGGATCGTCTGTGTACTGGCCTATAGCACGCCAGATCTCAGTATGAACGGCAAAATGATCTATGCAGCAATTACTTACACCCTACTTACCTTACTTTATACCGTCGTCAATATCCCTTACTGCGCATTGGGTGGTGTAATCACCAATGACCCGACTCAGCGTATCTCGCTGCAATCCTGGCGTTTTGTGCTGGCGACCGCGGGAGGCATGCTTTCTACTGTTCTGATGATGCCACTGGTTAATTTAATTGGCGGTGATAATAAACCACTCGGTTTCCAGGGCGGTATCGCGGTCCTTTCCGTGGTGGCATTCATGATGCTGGCATTTTGTTTCTTCACCACTAAAGAACGCGTTGAAGCACCACCTACAACAACGTCTATGCGGGAAGATTTACGTGATATCTGGCAAAACGACCAGTGGCGGATTGTCGGTTTACTAACCATTTTCAATATCCTGGCGGTGTGCGTACGCGGTGGGGCGATGATGTATTACGTCACATGGATTTTGGGCACGCCGGAAGTGTTTGTCGCTTTTCTCACCACTTATTGCGTGGGTAACCTGATTGGTTCCGCACTGGCAAAACCTCTGACCGACTGGAAATGTAAAGTCACTATCTTCTGGTGGACGAACGCCCTGCTGGCAGTGATTAGCCTCGCGATGTTCTTTGTTCCCATGCAGGCCAGCATCACTATGTTTGTCTTCATCTTCGTGATTGGTGTGTTGCATCAACTGGTGACACCTATCCAGTGGGTAATGATGTCCGATACCGTCGACTACGGCGAGTGGTGCAATGGTAAACGCCTGACCGGGATCAGTTTTGCTGGCACGCTGTTTGTGCTCAAACTGGGGTTGGCCTTCGGCGGCGCTCTTATCGGCTGGATGCTGGCTTATGGCGGATATGATGCGGCAGAAAAAGCGCAGAACAGCGCCACGATTAGCATCATTATTGCGCTATTCACGATTGTTCCGGCGATCTGTTATTTGCTGAGCGCGATTATCGCTAAACGCTACTACTCACTCACGACGCACAATCTGAAAACCGTTATGGAACAGCTGGCTCAGGGTAAACGCCGTTGCCAGCAACAATTCACCTCTCAAGAAGTGCAGAACTAA", - "dna_sequence_length": 1383, - "functions": [ - "putative transporter" - ], - "id": "CDS_3604", - "location": [ - [ - "NC_000913", - 3835929, - "-", - 1383 - ] - ], - "md5": "3077a130d540a9cbe92da2ce58e25ce3", - "parent_gene": "", - "protein_md5": "28b70be0d43a17f9e463f1a3743b00b1", - "protein_translation": "MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDAAEKAQNSATISIIIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQGKRRCQQQFTSQEVQN", - "protein_translation_length": 460, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rhuM" - ], - [ - "gene_synonym", - "b4653" - ], - [ - "gene_synonym", - "GeneID:5625579" - ], - [ - "gene_synonym", - "erhM" - ], - [ - "gene_synonym", - "ECK4456" - ], - [ - "gene_synonym", - "EcoGene:EG14448" - ], - [ - "gene_synonym", - "yicT" - ] - ], - "dna_sequence": "ATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTA", - "dna_sequence_length": 132, - "id": "CDS_3605", - "location": [ - [ - "NC_000913", - 3836425, - "+", - 132 - ] - ], - "md5": "dff1a5e4ef3be24553ac10cd306bc31e", - "parent_gene": "", - "protein_md5": "d65df6b24ac2c6b544dd539b5fdb483a", - "protein_translation": "MDDERLKNPPVGSSVLERIRDIHASMRRVYLQVICPPADSQPTV", - "protein_translation_length": 44, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yicK" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31436" - ], - [ - "gene_synonym", - "setC" - ], - [ - "gene_synonym", - "ECK3649" - ], - [ - "gene_synonym", - "GI:16131529" - ], - [ - "gene_synonym", - "b3659" - ], - [ - "gene_synonym", - "GeneID:948177" - ], - [ - "gene_synonym", - "EcoGene:EG11687" - ], - [ - "gene_synonym", - "NP_418115.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011959" - ], - [ - "gene_synonym", - "JW3633" - ] - ], - "dna_sequence": "ATGCAAAAAACGGCTACCACTCCATCAAAAATACTTGATCTCACTGCCGCGGCATTTTTACTTGTCGCCTTTCTGACGGGTATTGCGGGCGCTCTTCAGACTCCTACCCTAAGTATATTCCTCGCAGATGAACTGAAAGCCCGTCCTATAATGGTAGGTTTTTTCTTCACCGGTAGCGCTATTATGGGAATTCTGGTCAGTCAATTTCTGGCAAGGCACTCCGATAAACAAGGCGACCGTAAATTACTGATTCTGCTATGTTGCTTATTTGGAGTGCTGGCCTGCACGCTTTTTGCGTGGAATCGCAACTACTTCATTCTCCTCTCAACGGGCGTACTTCTGAGTAGTTTTGCTTCCACCGCAAACCCGCAAATGTTCGCCCTCGCCCGTGAACACGCCGACAGAACAGGCCGTGAGACGGTCATGTTCAGTACATTTTTACGTGCTCAGATCTCGCTTGCCTGGGTTATCGGGCCACCGCTCGCTTATGAACTGGCAATGGGATTTAGTTTTAAAGTGATGTATCTCACCGCTGCCATCGCATTTGTTGTTTGCGGACTGATAGTCTGGTTGTTTTTGCCATCAATACAAAGAAATATTCCTGTCGTTACCCAACCCGTAGAAATTTTACCCTCCACCCACAGGAAGCGGGATACGCGGCTACTTTTTGTGGTCTGTTCAATGATGTGGGCGGCGAATAATCTCTACATGATAAATATGCCGCTATTTATTATTGATGAACTGCATCTAACCGATAAACTGACTGGAGAAATGATTGGTATCGCTGCCGGTCTGGAAATTCCGATGATGTTAATCGCAGGCTATTACATGAAACGTATTGGCAAGCGACTATTAATGCTCATTGCTATCGTGAGTGGAATGTGTTTTTACGCCAGCGTACTCATGGCGACGACTCCGGCGGTTGAGCTGGAATTGCAAATTCTTAATGCCATCTTCCTTGGTATTCTCTGTGGTATCGGCATGCTTTATTTTCAGGACTTGATGCCTGAAAAAATAGGCTCTGCGACAACGTTATATGCAAATACTTCACGCGTCGGCTGGATTATCGCCGGCTCTGTTGACGGAATTATGGTTGAAATCTGGAGCTACCATGCGTTGTTCTGGCTGGCGATAGGGATGTTGGGTATTGCGATGATTTGCCTGCTGTTTATTAAAGATATTTAG", - "dna_sequence_length": 1185, - "functions": [ - "putative arabinose efflux transporter" - ], - "id": "CDS_3606", - "location": [ - [ - "NC_000913", - 3836953, - "+", - 1185 - ] - ], - "md5": "4478275a131eca3a1a4cf09ba55f60f4", - "parent_gene": "", - "protein_md5": "26e6c4258efce29f95fde20ccbf80368", - "protein_translation": "MQKTATTPSKILDLTAAAFLLVAFLTGIAGALQTPTLSIFLADELKARPIMVGFFFTGSAIMGILVSQFLARHSDKQGDRKLLILLCCLFGVLACTLFAWNRNYFILLSTGVLLSSFASTANPQMFALAREHADRTGRETVMFSTFLRAQISLAWVIGPPLAYELAMGFSFKVMYLTAAIAFVVCGLIVWLFLPSIQRNIPVVTQPVEILPSTHRKRDTRLLFVVCSMMWAANNLYMINMPLFIIDELHLTDKLTGEMIGIAAGLEIPMMLIAGYYMKRIGKRLLMLIAIVSGMCFYASVLMATTPAVELELQILNAIFLGILCGIGMLYFQDLMPEKIGSATTLYANTSRVGWIIAGSVDGIMVEIWSYHALFWLAIGMLGIAMICLLFIKDI", - "protein_translation_length": 394, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3650" - ], - [ - "gene_synonym", - "yicL" - ], - [ - "gene_synonym", - "NP_418116.1" - ], - [ - "gene_synonym", - "b3660" - ], - [ - "gene_synonym", - "EcoGene:EG11688" - ], - [ - "gene_synonym", - "GeneID:948176" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31437" - ], - [ - "gene_synonym", - "JW3634" - ], - [ - "gene_synonym", - "GI:16131530" - ], - [ - "gene_synonym", - "ASAP:ABE-0011962" - ] - ], - "dna_sequence": "ATGGGTTCCACCAGAAAGGGGATGCTGAACGTTCTGATTGCCGCCGTGTTGTGGGGAAGTTCAGGGGTCTGCGCGCAATACATCATGGAGCAAAGCCAGATGTCGTCGCAGTTTTTGACTATGACGCGTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCGGGCATTCTGGTTTTCTGCGCTATTTTGACATCGCTGGTCGGGACTTTTTTATTGGTGACACACGGTAATCCGACGTCATTATCGATCTCTCCTGCCGCGTTGTTCTGGGGCATTGCCTCGGCATTTGCTGCTGCATTCTATACCACCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGCGGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAACTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTTGGTGGTCATTGGTACGTCCCTGACATTTAGTCTGTACCTGAAAGGAGCACAATTAATTGGCGGTCCAAAAGCCAGCATTTTGAGCTGTGCAGAACCATTAAGTAGCGCGCTACTCTCTTTGCTGTTGCTGGGGATCACGTTCACATTACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGA", - "dna_sequence_length": 924, - "functions": [ - "EamA family inner 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- [ - "gene_synonym", - "ASAP:ABE-0011964" - ], - [ - "gene_synonym", - "GI:16131531" - ] - ], - "dna_sequence": "ATGAAACTGACAACACATCATCTACGGACAGGGGCCGCATTATTGCTGGCCGGAATTCTGCTGGCAGGTTGCGACCAGAGTAGCAGCGATGCAAAACACATTAAAGTTGGCGTTATAAATGGCGCAGAACAAGATGTCGCGGAAGTCGCTAAAAAGGTGGCAAAAGAGAAATATGGCCTCGATGTTGAACTGGTAGGATTTAGCGGTTCGTTGCTACCGAACGATGCGACAAATCATGGCGAACTTGATGCGAATGTCTTCCAGCATCGACCCTTTCTTGAACAAGATAATCAGGCGCATGGTTATAAACTGGTAGCGGTGGGAAATACGTTTGTCTTCCCTATGGCGGGTTATTCCAAAAAAATCAAAACCGTGGCGCAAATAAAAGAAGGCGCGACAGTGGCGATCCCCAACGACCCGACCAACCTTGGTCGCGCACTTTTACTGTTGCAAAAAGAGAAGCTAATTACTCTGAAAGAGGGAAAAGGGTTATTACCTACCGCGCTGGATATAACCGATAATCCTCGTCATTTGCAGATTATGGAACTCGAGGGGGCGCAGCTCCCGCGCGTACTGGATGATCCCAAAGTTGATGTAGCGATTATCAGCACCACTTACATTCAGCAGACCGGGCTTTCTCCGGTGCACGACAGCGTATTTATTGAAGATAAGAATTCGCCGTATGTGAATATTTTGGTGGCACGGGAAGATAATAAGAATGCAGAAAACGTGAAGGAATTTCTGCAATCTTATCAATCACCCGAAGTCGCTAAAGCGGCAGAAACCATTTTTAACGGTGGCGCGGTGCCTGGCTGGTAA", - "dna_sequence_length": 819, - "functions": [ - "cytoplasmic membrane lipoprotein-28" - ], - "id": "CDS_3608", - "location": [ - [ - "NC_000913", - 3839993, - "-", - 819 - ] - ], - "md5": "8358c3cda5246781d48378cf6a2d3bc8", - "parent_gene": "", - "protein_md5": "a4d4ea3ad968ca25c78b95d2bd8c0bc2", - "protein_translation": "MKLTTHHLRTGAALLLAGILLAGCDQSSSDAKHIKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGYKLVAVGNTFVFPMAGYSKKIKTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKEGKGLLPTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDSVFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPGW", - "protein_translation_length": 272, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0285076" - ], - [ - "gene_synonym", - "GeneID:1450300" - ], - [ - "gene_synonym", - "b4555" - ], - [ - "gene_synonym", - "ECK3652" - ], - [ - "gene_synonym", - "YP_588471.1" - ], - [ - "gene_synonym", - "EcoGene:EG14429" - ], - [ - "gene_synonym", - "yicS" - ], - [ - "gene_synonym", - "GI:94541128" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q2M7X4" - ], - [ - "gene_synonym", - "JW5965" - ] - ], - "dna_sequence": "ATGAAACCAACGACACTACTGCTTATTTTCACTTTTTTCGCTATGCCAGGCATCGTATACGCCGAGTCGCCTTTTAGCTCACTGCAGTCCGCAAAAGAGAAAACCACGGTATTACAAGATTTACGTAAAATTTGCACGCCACAGGCGTCATTATCAGATGAAGCGTGGGAAAAGTTAATGTTGTCAGATGAAAACAATAAACAACATATACGCGAGGCCATCGTGGCGATGGAACGTAATAATCAGAGCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAA", - "dna_sequence_length": 294, - "functions": [ - "putative periplasmic protein" - ], - "id": "CDS_3609", - "location": [ - [ - "NC_000913", - 3840215, - "+", - 294 - ] - ], - "md5": "02353a9c42d6ff56a5d2aa59f12fb58c", - "parent_gene": "", - "protein_md5": "e8cf46436da140db9d3c2c5b52c007d6", - "protein_translation": "MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKICTPQASLSDEAWEKLMLSDENNKQHIREAIVAMERNNQSNYWEALGKVECPDM", - "protein_translation_length": 97, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5938" - ], - [ - "gene_synonym", - "ASAP:ABE-0011967" - ], - [ - "gene_synonym", - "yicM" - ], - [ - "gene_synonym", - "ECK3653" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADL1" - ], - [ - "gene_synonym", - "GeneID:948213" - ], - [ - "gene_synonym", - "b3662" - ], - [ - "gene_synonym", - "EcoGene:EG11689" - ], - [ - "gene_synonym", - "GI:145698327" - ], - [ - "gene_synonym", - "NP_418118.2" - ], - [ - "gene_synonym", - "nepI" - ], - [ - "gene_synonym", - "gaiA" - ] - ], - "dna_sequence": "ATGAGTGAATTTATTGCCGAAAACCGCGGCGCGGATGCCATCACCCGACCGAACTGGTCAGCCGTTTTCTCGGTGGCGTTTTGTGTCGCCTGTCTGATTATCGTTGAGTTTTTGCCCGTCAGTTTGTTGACGCCAATGGCCCAGGATTTAGGCATTTCGGAAGGGGTTGCCGGGCAATCGGTGACCGTGACCGCCTTTGTGGCAATGTTTGCCAGTTTGTTTATTACCCAGACAATTCAGGCTACTGACCGCCGCTACGTTGTTATTTTGTTTGCCGTTTTGCTGACGCTCTCCTGCTTGCTGGTTTCCTTTGCTAACTCATTCAGTTTGCTTTTAATCGGTCGTGCCTGTCTGGGGCTGGCGCTGGGCGGGTTCTGGGCGATGTCGGCGTCGCTGACCATGCGTCTGGTGCCGCCGCGTACGGTGCCGAAGGCGCTGTCGGTGATCTTCGGCGCGGTTTCTATTGCGCTGGTGATTGCCGCGCCGTTGGGCAGTTTTTTAGGCGAGCTTATCGGTTGGCGCAATGTCTTTAATGCGGCGGCGGTGATGGGCGTGCTGTGTATTTTCTGGATTATCAAATCATTGCCTTCACTGCCAGGCGAACCCTCGCATCAGAAACAAAATACTTTCCGCTTATTACAACGTCCGGGTGTGATGGCAGGGATGATCGCCATCTTCATGTCTTTCGCCGGGCAGTTTGCTTTCTTCACGTATATTCGCCCGGTGTATATGAACCTGGCGGGATTCGGCGTGGATGGCTTAACGCTGGTGCTGTTGAGTTTTGGTATCGCCAGCTTTATTGGTACGTCGCTTTCGTCGTTCATTCTTAAACGTTCGGTAAAACTGGCCTTAGCAGGCGCGCCGTTAATACTGGCTGTGAGTGCGTTGGTACTGACGTTGTGGGGAAGCGATAAAATCGTTGCTACCGGCGTGGCGATTATCTGGGGGCTAACTTTTGCATTGGTTCCCGTCGGCTGGTCAACGTGGATCACCCGCTCGCTGGCCGATCAGGCAGAAAAAGCCGGGTCTATTCAGGTGGCGGTTATTCAGCTTGCTAATACCTGTGGCGCGGCAATCGGCGGTTATGCGCTGGATAATATTGGTCTGACTTCGCCGTTGATGTTGTCCGGCACATTGATGTTGCTGACTGCATTGTTGGTTACTGCAAAGGTGAAAATGAAGAAATCCTGA", - "dna_sequence_length": 1191, - "functions": [ - "putative transporter" - ], - "id": "CDS_3610", - "location": [ - [ - "NC_000913", - 3841739, - "-", - 1191 - ] - ], - "md5": "37230e595d380800ff79378a6cad98b1", - "parent_gene": "", - "protein_md5": "fca3ea0f99b22a857e731e9a4b27558e", - "protein_translation": "MSEFIAENRGADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFILKRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLVTAKVKMKKS", - "protein_translation_length": 396, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3654" - ], - [ - "gene_synonym", - "NP_418119.2" - ], - [ - "gene_synonym", - "yicN" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADL3" - ], - [ - "gene_synonym", - "b3663" - ], - [ - "gene_synonym", - "GeneID:948173" - ], - [ - "gene_synonym", - "GI:90111630" - ], - [ - "gene_synonym", - "ASAP:ABE-0011972" - ], - [ - "gene_synonym", - "JW5637" - ], - [ - "gene_synonym", - "EcoGene:EG11690" - ] - ], - "dna_sequence": "ATGATCTGGATAATGCTCGCCACGCTGGCGGTAGTGTTTGTGGTTGGTTTTCGGGTGCTGACATCCGGGGCCAGAAAAGCGATTCGCCGTCTCAGCGATCGGCTGAACATCGATGTCGTACCCGTGGAGTCGATGGTCGATCAAATGGGAAAGTCAGCTGGTGACGAATTTTTACGTTATTTGCATCGTCCGGATGAGTCGCACCTGCAAAACGCCGCGCAGGTGTTGCTCATCTGGCAAATTGTCATTGTCGATGGTAGCGAACAGAACCTGCTGCAATGGCATCGGATTTTACAAAAAGCTCGCCTCGCCGCGCCGATTACCGACGCTCAGGTCAGGCTGGCGCTAGGTTTTCTGCGCGAAACCGAACCTGAAATGCAGGATATTAATGCTTTTCAGATGCGCTATAACGCGTTCTTTCAGCCTGCCGAGGGCGTTCACTGGTTGCATTGA", - "dna_sequence_length": 453, - "functions": [ - "DUF1198 family protein" - ], - "id": "CDS_3611", - "location": [ - [ - "NC_000913", - 3842402, - "-", - 453 - ] - ], - "md5": "a93b825d18d43a6a9c395061190bcc0a", - "parent_gene": "", - "protein_md5": "f3b16c26d8b8718a1f5f2fd3d3d5fb58", - "protein_translation": "MIWIMLATLAVVFVVGFRVLTSGARKAIRRLSDRLNIDVVPVESMVDQMGKSAGDEFLRYLHRPDESHLQNAAQVLLIWQIVIVDGSEQNLLQWHRILQKARLAAPITDAQVRLALGFLRETEPEMQDINAFQMRYNAFFQPAEGVHWLH", - "protein_translation_length": 150, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3655" - ], - [ - "gene_synonym", - "EcoGene:EG11691" - ], - [ - "gene_synonym", - "yicO" - ], - [ - "gene_synonym", - "adeQ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31440" - ], - [ - "gene_synonym", - "pbuA" - ], - [ - "gene_synonym", - "NP_418120.2" - ], - [ - "gene_synonym", - "GI:90111631" - ], - [ - "gene_synonym", - "GeneID:948174" - ], - [ - "gene_synonym", - "b3664" - ], - [ - "gene_synonym", - "ASAP:ABE-0011975" - ], - [ - "gene_synonym", - "JW5636" - ] - ], - "dna_sequence": "ATGAATAATGACAATACCGATTACGTGAGTAATGAATCAGGGACGCTTTCGCGATTATTTAAACTACCTCAGCATGGGACCACCGTCCGCACAGAATTGATTGCGGGGATGACCACTTTTTTAACCATGGTGTACATCGTTTTTGTGAACCCGCAAATCCTCGGCGCGGCACAAATGGACCCGAAAGTGGTGTTTGTTACCACCTGTTTGATTGCCGGTATCGGCAGTATTGCGATGGGGATATTTGCTAACTTACCCGTGGCGCTGGCTCCGGCAATGGGGCTGAACGCCTTCTTTGCCTTCGTGGTCGTGGGGGCGATGGGCATCTCCTGGCAGACCGGGATGGGCGCAATATTCTGGGGCGCAGTTGGACTATTTTTGCTCACGCTGTTTCGTATCCGGTACTGGATGATCTCCAACATTCCCTTAAGTTTACGTATTGGTATCACCAGCGGAATTGGATTATTTATCGCCTTAATGGGATTAAAAAATACTGGCGTTATTGTCGCCAATAAAGACACGCTGGTGATGATTGGCGATTTAAGTTCTCACGGCGTGTTGTTAGGTATTTTAGGGTTTTTTATTATAACCGTGTTGTCATCACGTCATTTTCATGCCGCGGTGCTGGTTTCTATTGTGGTGACGTCTTGCTGTGGATTATTTTTCGGTGATGTTCATTTTAGCGGCGTCTATTCCATTCCGCCTGATATTAGCGGCGTCATTGGTGAAGTAGATTTGAGCGGCGCGTTAACACTTGAACTCGCCGGTATCATTTTCTCCTTTATGCTGATCAACCTATTTGATTCATCAGGAACATTAATTGGTGTAACTGATAAAGCGGGCTTAATAGATGGTAACGGTAAATTCCCCAATATGAATAAGGCGCTGTATGTTGATAGCGTCAGTTCGGTGGCGGGTGCGTTTATCGGCACCTCGTCTGTTACTGCCTATATTGAAAGTACTTCTGGTGTGGCAGTCGGTGGCCGCACGGGGCTGACTGCGGTTGTGGTTGGCGTTATGTTCCTGTTGGTTATGTTCTTCTCACCGCTGGTGGCGATAGTTCCTCCTTACGCAACCGCCGGAGCGTTAATCTTTGTTGGCGTGCTGATGACTTCGAGCCTGGCGCGCGTTAACTGGGATGATTTTACCGAATCGGTGCCTGCGTTTATTACCACGGTGATGATGCCCTTTACTTTCTCGATCACCGAAGGGATTGCACTCGGCTTTATGTCGTACTGCATCATGAAAGTATGCACCGGGCGCTGGCGCGATCTGAACCTGTGTGTGGTGGTGGTCGCAGCTCTGTTTGCACTGAAGATTATTCTGGTGGATTAG", - "dna_sequence_length": 1335, - "functions": [ - "adenine permease, high affinity", - "adenine:H+ symporter" - ], - "id": "CDS_3612", - "location": [ - [ - "NC_000913", - 3843789, - "-", - 1335 - ] - ], - "md5": "20fc07deed2bb184d6af104aa4b6bcbc", - "parent_gene": "", - "protein_md5": "3c9bacd07595e0776ad06cca96c29783", - "protein_translation": "MNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRYWMISNIPLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPDISGVIGEVDLSGALTLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDGNGKFPNMNKALYVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAIVPPYATAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVAALFALKIILVD", - "protein_translation_length": 444, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0011979" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31441" - ], - [ - "gene_synonym", - "ECK3656" - ], - [ - "gene_synonym", - "adu" - ], - [ - "gene_synonym", - "b3665" - ], - [ - "gene_synonym", - "JW3640" - ], - [ - "gene_synonym", - "GeneID:948210" - ], - [ - "gene_synonym", - "adeD" - ], - [ - "gene_synonym", - "ade" - ], - [ - "gene_synonym", - "NP_418121.1" - ], - [ - "gene_synonym", - "adeC" - ], - [ - "gene_synonym", - "EcoGene:EG11692" - ], - [ - "gene_synonym", - "yicP" - ], - [ - "gene_synonym", - "GI:16131535" - ] - ], - "dna_sequence": "ATGAATAATTCTATTAACCATAAATTTCATCACATTAGCCGGGCTGAATACCAGGAATTGTTAGCCGTTTCCCGTGGCGACGCTGTTGCCGATTATATTATTGATAATGTCTCTATTCTCGACCTGATCAATGGCGGAGAAATTTCCGGCCCAATTGTGATTAAAGGACGTTACATTGCCGGTGTTGGCGCAGAATACACTGATGCTCCGGCTTTGCAGCGGATTGATGCTCGCGGCGCAACGGCGGTGCCAGGGTTTATTGATGCTCACCTGCATATTGAATCCAGCATGATGACGCCGGTCACTTTTGAAACCGCTACCCTGCCGCGCGGCCTGACGACCGTTATTTGCGACCCTCATGAAATCGTCAACGTGATGGGCGAAGCCGGATTCGCCTGGTTTGCCCGCTGTGCCGAACAGGCAAGGCAAAACCAGTACTTACAGGTCAGCTCTTGCGTACCCGCCCTGGAAGGCTGCGATGTTAACGGTGCCAGTTTTACCCTTGAACAGATGCTCGCCTGGCGGGACCATCCGCAGGTTACCGGCCTTGCAGAAATGATGGACTACCCTGGCGTAATTAGCGGGCAGAATGCGCTGCTCGATAAACTGGATGCATTTCGCCACCTGACGCTGGACGGTCACTGCCCGGGTTTGGGTGGTAAAGAACTTAACGCCTATATTACTGCGGGTATTGAAAACTGCCACGAAAGTTATCAGCTGGAAGAAGGACGCCGGAAATTACAACTCGGCATGTCGTTGATGATCCGCGAAGGGTCCGCTGCCCGCAATCTCAACGCGCTGGCACCGTTGATCAACGAATTTAACAGCCCGCAATGCATGCTCTGTACCGATGACCGTAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGCATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAGCAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGCGCAAACCTTACAGGCGGAAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAGTTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATTACGCACTCCCACTCCAGCGTCTACAGCGAAAATGGTTTTGATCGCGATGATGTGAGCTTTATTGCCGTACTTGAGCGTTACGGGCAACGGCTGGCTCCGGCTTGTGGTTTGCTTGGCGGCTTTGGACTGAATGAAGGTGCGCTGGCTGCGACGGTCAGCCATGACAGCCATAATATTGTGGTGATCGGTCGCAGTGCCGAAGAGATGGCGCTGGCGGTCAATCAGGTGATTCAGGATGGCGGCGGGCTGTGCGTGGTACGTAACGGCCAGGTACAAAGTCATCTGCCGTTACCCATTGCCGGGCTGATGAGCACCGACACGGCGCAGTCGCTGGCGGAACAAATTGACGCCTTGAAAGCCGCCGCCCGTGAATGCGGTCCGTTACCCGATGAGCCGTTTATTCAGATGGCGTTTCTTTCTCTGCCAGTGATCCCCGCGCTAAAACTAACCAGTCAGGGGCTATTTGATGGCGAGAAGTTTGCCTTCACTACGCTGGAAGTCACGGAATAA", 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"gene_synonym", - "NP_418122.1" - ], - [ - "gene_synonym", - "ECK3657" - ], - [ - "gene_synonym", - "JW3641" - ], - [ - "gene_synonym", - "uhpT" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGC0" - ], - [ - "gene_synonym", - "ASAP:ABE-0011981" - ], - [ - "gene_synonym", - "b3666" - ], - [ - "gene_synonym", - "EcoGene:EG11054" - ], - [ - "gene_synonym", - "GeneID:948201" - ], - [ - "gene_synonym", - "GI:16131536" - ] - ], - "dna_sequence": "ATGCTGGCTTTCTTAAACCAGGTTCGCAAGCCGACCCTGGACCTTCCGCTCGAAGTGCGGCGCAAAATGTGGTTCAAACCGTTCATGCAATCCTACCTGGTGGTCTTTATCGGCTACCTGACGATGTACCTGATTCGCAAGAACTTTAACATCGCGCAGAACGATATGATTTCGACCTACGGGTTGAGCATGACGCAGCTGGGGATGATCGGCCTGGGTTTCTCCATCACTTATGGCGTGGGTAAAACGCTGGTTTCCTACTACGCCGACGGCAAAAACACCAAACAATTCCTGCCGTTCATGCTGATCCTCTCTGCTATTTGTATGCTGGGCTTCAGTGCCAGTATGGGCAGCGGCTCGGTTAGCCTGTTCCTGATGATTGCCTTCTACGCCTTAAGCGGCTTTTTCCAGAGTACCGGCGGTTCGTGCAGTTACTCCACCATCACCAAATGGACGCCGCGTCGTAAACGCGGGACATTCCTCGGTTTCTGGAATATTTCTCACAACCTTGGCGGTGCAGGCGCAGCAGGTGTGGCGCTGTTCGGGGCAAATTACCTGTTCGATGGCCATGTCATCGGCATGTTTATCTTCCCGTCGATTATCGCGCTGATTGTCGGTTTTATCGGCCTGCGTTACGGCAGCGACTCCCCGGAATCTTATGGCCTCGGCAAAGCTGAAGAACTGTTCGGCGAGGAGATCAGCGAAGAGGACAAAGAGACAGAATCTACCGATATGACCAAGTGGCAGATCTTTGTTGAGTATGTGCTGAAAAACAAAGTGATCTGGCTGCTGTGCTTCGCCAACATTTTCCTCTATGTGGTACGTATTGGTATCGACCAGTGGTCAACCGTATACGCGTTCCAGGAACTGAAACTCTCTAAAGCGGTGGCGATTCAGGGCTTTACGCTGTTTGAAGCTGGTGCGCTGGTCGGTACGCTGCTGTGGGGCTGGCTCTCTGACCTGGCGAACGGTCGCCGTGGCCTGGTGGCCTGCATCGCGCTGGCGCTGATTATCGCCACGCTCGGTGTGTATCAACATGCCAGTAACGAATATATCTATCTGGCTTCTCTCTTTGCGTTGGGTTTCCTGGTCTTTGGCCCGCAATTGTTGATTGGTGTGGCTGCTGTTGGCTTTGTACCTAAAAAAGCGATTGGCGCTGCCGATGGTATTAAAGGCACCTTTGCTTACCTGATTGGTGACAGCTTTGCCAAGTTAGGTCTGGGAATGATTGCCGATGGGACGCCGGTATTCGGCCTTACCGGCTGGGCAGGCACCTTCGCCGCGCTGGATATCGCCGCGATTGGTTGTATCTGCCTGATGGCGATAGTGGCGGTAATGGAAGAACGCAAAATCCGCCGCGAGAAAAAAATTCAGCAGTTGACAGTGGCATAA", 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"gene_synonym", - "JW3642" - ], - [ - "gene_synonym", - "ASAP:ABE-0011990" - ], - [ - "gene_synonym", - "b3667" - ], - [ - "gene_synonym", - "uhpC" - ], - [ - "gene_synonym", - "GeneID:948184" - ], - [ - "gene_synonym", - "EcoGene:EG11053" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09836" - ] - ], - "dna_sequence": "ATGTTGCCGTTTCTGAAAGCGCCTGCCGATGCGCCATTAATGACTGATAAATATGAAATTGATGCCCGCTATCGCTACTGGCGTCGGCATATTCTGCTGACCATCTGGCTGGGTTACGCGCTGTTTTACTTCACGCGGAAAAGTTTTAACGCCGCCGTACCAGAAATCCTTGCTAACGGCGTGCTCAGCCGTAGCGATATCGGCCTGTTAGCGACCCTGTTTTACATTACCTATGGCGTGTCGAAGTTTGTCTCCGGCATTGTCAGCGATCGCTCAAATGCCCGTTATTTTATGGGGATAGGGCTTATCGCCACGGGCATTATCAACATTCTGTTTGGCTTCTCGACGTCGCTATGGGCGTTTGCCGTGCTCTGGGTGCTGAACGCCTTTTTCCAGGGCTGGGGTTCACCGGTGTGTGCGCGTCTGTTAACGGCCTGGTATTCACGTACCGAGCGCGGCGGTTGGTGGGCATTATGGAACACGGCGCATAACGTCGGCGGCGCACTCATTCCCATTGTGATGGCAGCGGCTGCGCTGCATTACGGCTGGCGTGCCGGGATGATGATTGCTGGTTGTATGGCGATAGTCGTGGGGATTTTTCTCTGCTGGCGGCTACGCGATCGCCCGCAGGCGTTAGGTTTACCGGCGGTCGGTGAATGGCGACACGACGCGCTGGAAATTGCTCAACAACAAGAAGGGGCAGGGTTGACGCGTAAAGAGATCCTCACCAAATATGTGTTGCTGAATCCGTATATCTGGCTGCTTTCGTTTTGCTATGTGCTGGTCTATGTGGTCCGGGCGGCGATCAACGACTGGGGCAATTTGTATATGTCCGAGACACTGGGCGTCGATCTGGTCACGGCGAATACGGCAGTGACGATGTTTGAACTGGGCGGATTTATCGGTGCGCTGGTAGCCGGTTGGGGCTCGGACAAATTGTTTAACGGCAACCGAGGGCCGATGAATTTGATTTTCGCCGCCGGAATTTTGCTTTCAGTCGGCTCCCTGTGGCTGATGCCATTTGCCAGCTACGTGATGCAGGCAACCTGCTTCTTCACCATTGGTTTTTTTGTCTTTGGCCCACAGATGTTAATCGGTATGGCGGCGGCAGAGTGTTCCCACAAAGAGGCGGCAGGGGCGGCGACGGGGTTTGTCGGCTTGTTTGCTTATCTGGGGGCGTCGCTTGCTGGTTGGCCGCTGGCGAAAGTACTCGATACCTGGCACTGGAGCGGATTTTTTGTGGTTATCTCTATCGCCGCCGGGATTTCCGCACTGCTGTTACTGCCCTTTTTGAACGCCCAGACACCGCGCGAAGCGTGA", 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"NP_418124.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0011993" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09835" - ], - [ - "gene_synonym", - "uhpB" - ], - [ - "gene_synonym", - "b3668" - ], - [ - "gene_synonym", - "GeneID:948195" - ], - [ - "gene_synonym", - "EcoGene:EG11052" - ] - ], - "dna_sequence": "ATGAAGACGTTGTTCTCCCGCTTAATTACCGTTATTGCCTGCTTTTTTATCTTCTCTGCCGCATGGTTTTGCCTGTGGAGTATCAGCCTGCATCTGGTTGAGCGCCCTGATATGGCGGTGCTGTTATTTCCGTTTGGTCTGCGTCTGGGGCTAATGCTGCAATGCCCGCGCGGATACTGGCCCGTATTGCTGGGCGCGGAGTGGCTGCTGATTTACTGGCTAACGCAGGCGGTCGGTTTAACCCATTTTCCGTTATTGATGATCGGTAGTTTACTGACGTTACTGCCCGTAGCGCTGATCTCGCGCTATCGCCATCAGCGTGACTGGCGCACCTTGCTGTTACAGGGGGCGGCGTTAACGGCGGCGGCGTTGTTGCAGTCGCTGCCCTGGCTTTGGCACGGCAAAGAGTCGTGGAATGCGCTGTTGCTGACTTTAACTGGCGGCCTGACGCTGGCCCCGATATGTCTGGTGTTCTGGCACTATCTCGCCAATAACACCTGGCTGCCGCTCGGTCCGTCACTGGTTTCTCAGCCAATCAACTGGCGCGGGCGACATCTGGTCTGGTACTTGCTGCTGTTTGTTATCAGTCTCTGGCTCCAGTTGGGATTGCCGGACGAACTGTCGCGCTTTACGCCATTCTGTCTGGCGCTGCCGATTATCGCGCTGGCCTGGCACTATGGTTGGCAAGGGGCGCTGATTGCGACGTTGATGAACGCCATCGCGCTGATCGCCAGTCAAACCTGGCGCGATCATCCGGTGGATTTATTGCTCTCGCTGCTGGTGCAAAGTCTGACAGGGTTGTTGCTTGGCGCTGGCATCCAGCGGTTGCGTGAACTTAACCAGTCGCTGCAAAAGGAACTGGCGCGCAATCAGCATCTGGCTGAACGGTTGCTGGAAACCGAAGAGAGCGTGCGCCGTGATGTGGCGCGTGAGCTGCATGATGATATCGGTCAGACCATCACTGCTATTCGTACTCAGGCGGGCATTGTTCAGCGGCTGGCGGCAGATAACGCCAGCGTGAAGCAGAGCGGGCAGCTCATCGAACAACTATCGCTGGGCGTTTACGACGCGGTGCGCCGTTTGTTGGGTCGGTTACGTCCGCGCCAGTTGGATGATCTCACCCTGGAGCAGGCCATCCGCTCACTGATGCGGGAAATGGAGCTGGAAGGGCGCGGTATTGTCAGCCATCTCGAATGGCGAATCGATGAATCAGCGTTAAGCGAAAACCAGCGCGTGACGCTGTTTCGTGTCTGCCAGGAAGGGCTGAACAACATTGTGAAACATGCTGATGCCAGCGCGGTCACCCTGCAAGGCTGGCAGCAGGATGAACGGTTGATGCTGGTTATTGAAGACGATGGCAGCGGTTTGCCGCCGGGTTCCGGGCAACAAGGTTTTGGCCTCACCGGAATGCGCGAGCGCGTAACGGCGCTGGGTGGCACATTACACATTTCCTGTCTGCACGGCACGCGTGTCAGCGTTTCTCTACCTCAACGCTATGTCTAA", 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- "JW3644" - ], - [ - "gene_synonym", - "NP_418125.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGA6" - ], - [ - "gene_synonym", - "GI:16131539" - ], - [ - "gene_synonym", - "ASAP:ABE-0011995" - ], - [ - "gene_synonym", - "GeneID:948178" - ], - [ - "gene_synonym", - "uhpA" - ], - [ - "gene_synonym", - "b3669" - ], - [ - "gene_synonym", - "EcoGene:EG11051" - ] - ], - "dna_sequence": "ATGATCACCGTTGCCCTTATAGACGATCACCTCATCGTCCGCTCCGGCTTTGCGCAGCTGCTGGGGCTGGAACCTGATTTGCAGGTAGTTGCCGAGTTTGGTTCGGGGCGCGAGGCGCTGGCGGGGCTGCCGGGGCGCGGTGTGCAGGTGTGTATTTGCGATATCTCCATGCCCGATATCTCCGGTCTGGAGCTGCTAAGCCAGCTGCCGAAAGGTATGGCGACGATTATGCTCTCCGTTCACGACAGTCCTGCGCTGGTTGAGCAGGCGCTTAACGCGGGGGCACGCGGCTTTCTTTCCAAACGCTGTAGCCCGGATGAACTCATTGCTGCGGTGCATACGGTTGCCACGGGCGGCTGTTATCTGACGCCGGATATTGCCATTAAACTGGCATCCGGTCGTCAGGACCCGCTAACCAAACGTGAACGCCAGGTGGCGGAAAAACTGGCGCAAGGAATGGCGGTGAAAGAGATTGCCGCCGAACTGGGCTTGTCACCGAAAACGGTACACGTCCATCGCGCCAATCTGATGGAAAAACTGGGCGTCAGTAACGACGTAGAGCTGGCGCGCCGCATGTTTGATGGCTGGTGA", - "dna_sequence_length": 591, - "functions": [ - "response regulator in two-component regulatory system wtih UhpB" - ], - "id": "CDS_3617", - "location": [ - [ - "NC_000913", - 3850726, - "-", - 591 - ] - ], - "md5": "5c5d489121a121067274122c7068ebcc", - "parent_gene": "", - "protein_md5": "4aef5d5ffaa64bb81138a848c65b368b", - "protein_translation": "MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3661" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADF8" - ], - [ - "gene_synonym", - "NP_418126.1" - ], - [ - "gene_synonym", - "EcoGene:EG10502" - ], - [ - "gene_synonym", - "JW3645" - ], - [ - "gene_synonym", - "GI:16131540" - ], - [ - "gene_synonym", - "b3670" - ], - [ - "gene_synonym", - "ilvN" - ], - [ - "gene_synonym", - "ASAP:ABE-0011997" - ], - [ - "gene_synonym", - "GeneID:948183" - ] - ], - "dna_sequence": "ATGCAAAACACAACTCATGACAACGTAATTCTGGAGCTCACCGTTCGCAACCATCCGGGCGTAATGACCCACGTTTGTGGCCTTTTTGCCCGCCGCGCTTTTAACGTTGAAGGCATTCTTTGTCTGCCGATTCAGGACAGCGACAAAAGCCATATCTGGCTACTGGTCAATGACGACCAGCGTCTGGAGCAGATGATAAGCCAAATCGATAAGCTGGAAGATGTCGTGAAAGTGCAGCGTAATCAGTCCGATCCGACGATGTTTAACAAGATCGCGGTGTTTTTTCAGTAA", - "dna_sequence_length": 291, - "functions": [ - "acetolactate synthase 1 small subunit" - ], - "id": "CDS_3618", - "location": [ - [ - "NC_000913", - 3851092, - "-", - 291 - ] - ], - "md5": "12b9aa0b874b354f5f9d2f165c2616f4", - "parent_gene": "", - "protein_md5": "8ef52e4ae7b1adaf3a97b79e67a3d302", - "protein_translation": "MQNTTHDNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPIQDSDKSHIWLLVNDDQRLEQMISQIDKLEDVVKVQRNQSDPTMFNKIAVFFQ", - "protein_translation_length": 96, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3662" - ], - [ - "gene_synonym", - "JW3646" - ], - [ - "gene_synonym", - "GI:16131541" - ], - [ - "gene_synonym", - "b3671" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08142" - ], - [ - "gene_synonym", - "EcoGene:EG10494" - ], - [ - "gene_synonym", - "NP_418127.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0011999" - ], - [ - "gene_synonym", - "GeneID:948182" - ], - [ - "gene_synonym", - "ilvB" - ] - ], - "dna_sequence": "ATGGCAAGTTCGGGCACAACATCGACGCGTAAGCGCTTTACCGGCGCAGAATTTATCGTTCATTTCCTGGAACAGCAGGGCATTAAGATTGTGACAGGCATTCCGGGCGGTTCTATCCTGCCTGTTTACGATGCCTTAAGCCAAAGCACGCAAATCCGCCATATTCTGGCCCGTCATGAACAGGGCGCGGGCTTTATCGCTCAGGGAATGGCGCGCACCGACGGTAAACCGGCGGTCTGTATGGCCTGTAGCGGACCGGGTGCGACTAACCTGGTGACCGCCATTGCCGATGCGCGGCTGGACTCCATCCCGCTGATTTGCATCACTGGTCAGGTTCCCGCCTCGATGATCGGCACCGACGCCTTCCAGGAAGTGGACACCTACGGCATCTCTATCCCCATCACCAAACACAACTATCTGGTCAGACATATCGAAGAACTCCCGCAGGTCATGAGCGATGCCTTCCGCATTGCGCAATCAGGCCGCCCAGGCCCGGTGTGGATAGACATTCCTAAGGATGTGCAAACGGCAGTTTTTGAGATTGAAACACAGCCCGCTATGGCAGAAAAAGCCGCCGCCCCCGCCTTTAGCGAAGAAAGCATTCGTGACGCAGCGGCGATGATTAACGCTGCCAAACGCCCGGTGCTTTATCTGGGCGGCGGTGTGATCAATGCGCCCGCACGGGTGCGTGAACTGGCGGAGAAAGCGCAACTGCCTACCACCATGACTTTAATGGCGCTGGGCATGTTGCCAAAAGCGCATCCGTTGTCGCTGGGTATGCTGGGGATGCACGGCGTGCGCAGCACCAACTATATTTTGCAGGAGGCGGATTTGTTGATAGTGCTCGGTGCGCGTTTTGATGACCGGGCGATTGGCAAAACCGAGCAGTTCTGTCCGAATGCCAAAATCATTCATGTCGATATCGACCGTGCAGAGCTGGGTAAAATCAAGCAGCCGCACGTGGCGATTCAGGCGGATGTTGATGACGTGCTGGCGCAGTTGATCCCGCTGGTGGAAGCGCAACCGCGTGCAGAGTGGCACCAGTTGGTAGCGGATTTGCAGCGTGAGTTTCCGTGTCCAATCCCGAAAGCGTGCGATCCGTTAAGCCATTACGGCCTGATCAACGCCGTTGCCGCCTGTGTCGATGACAATGCAATTATCACCACCGACGTTGGTCAGCATCAGATGTGGACCGCGCAAGCTTATCCGCTCAATCGCCCACGCCAGTGGCTGACCTCCGGTGGGCTGGGCACGATGGGTTTTGGCCTGCCTGCGGCGATTGGCGCTGCGCTGGCGAACCCGGATCGCAAAGTGTTGTGTTTCTCCGGCGACGGCAGCCTGATGATGAATATTCAGGAGATGGCGACCGCCAGTGAAAATCAGCTGGATGTCAAAATCATTCTGATGAACAACGAAGCGCTGGGGCTGGTGCATCAGCAACAGAGTCTGTTCTACGAGCAAGGCGTTTTTGCCGCCACCTATCCGGGCAAAATCAACTTTATGCAGATTGCCGCCGGATTCGGCCTCGAAACCTGTGATTTGAATAACGAAGCCGATCCGCAGGCTTCATTGCAGGAAATCATCAATCGCCCTGGCCCGGCGCTGATCCATGTGCGCATTGATGCCGAAGAAAAAGTTTACCCGATGGTGCCGCCAGGTGCGGCGAATACTGAAATGGTGGGGGAATAA", 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"ECK3663" - ], - [ - "gene_synonym", - "JW3647" - ], - [ - "gene_synonym", - "ivbL" - ], - [ - "gene_synonym", - "NP_418128.1" - ], - [ - "gene_synonym", - "GI:16131542" - ], - [ - "gene_synonym", - "ASAP:ABE-0012002" - ], - [ - "gene_synonym", - "b3672" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03061" - ], - [ - "gene_synonym", - "GeneID:948181" - ], - [ - "gene_synonym", - "EcoGene:EG11275" - ] - ], - "dna_sequence": "ATGACTACTTCCATGCTCAACGCAAAACTACTACCAACTGCGCCATCCGCCGCAGTGGTCGTCGTGCGTGTGGTGGTGGTCGTCGGCAATGCGCCGTAG", - "dna_sequence_length": 99, - "functions": [ - "ilvB operon leader peptide" - ], - "id": "CDS_3620", - "location": [ - [ - "NC_000913", - 3852988, - "-", - 99 - ] - ], - "md5": "eb0dd11491798fbb66ca8750262d1d1d", - "parent_gene": "", - "protein_md5": "1c33a7a64691bb4ff675788cf927599d", - "protein_translation": "MTTSMLNAKLLPTAPSAAVVVVRVVVVVGNAP", - "protein_translation_length": 32, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ysdA" - ], - [ - "gene_synonym", - "ysdB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:A5A627" - ], - [ - "gene_synonym", - "GeneID:5061527" - ], - [ - "gene_synonym", - "tisB" - ], - [ - "gene_synonym", - "b4618" - ], - [ - "gene_synonym", - "YP_001165331.1" - ], - [ - "gene_synonym", - "GI:145698329" - ], - [ - "gene_synonym", - "ECK4427" - ], - [ - "gene_synonym", - "EcoGene:EG14402" - ] - ], - "dna_sequence": "ATGAACCTGGTGGATATCGCCATTCTTATCCTCAAACTCATTGTTGCAGCACTGCAACTGCTTGATGCTGTTCTGAAATACCTGAAGTAA", - "dna_sequence_length": 90, - "functions": [ - "toxic membrane persister formation peptide, LexA-regulated" - ], - "id": "CDS_3621", - "location": [ - [ - "NC_000913", - 3853553, - "+", - 90 - ] - ], - "md5": "7d2582399f37791dad4acefaff332eed", - "parent_gene": "", - "protein_md5": "fb22c8b18a20f8ac9ec813f92f30da37", - "protein_translation": "MNLVDIAILILKLIVAALQLLDAVLKYLK", - "protein_translation_length": 29, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111634" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31442" - ], - [ - "gene_synonym", - "ECK3664" - ], - [ - "gene_synonym", - "JW5634" - ], - [ - "gene_synonym", - "NP_418129.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0012011" - ], - [ - "gene_synonym", - "b3673" - ], - [ - "gene_synonym", - "EcoGene:EG11693" - ], - [ - "gene_synonym", - "yicQ" - ], - [ - "gene_synonym", - "emrD" - ], - [ - "gene_synonym", - "GeneID:948180" - ] - ], - "dna_sequence": "ATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTGGCCGTCGGTCAGATGGCGCAAACCATTTATATTCCAGCTATTGCCGATATGGCGCGCGATCTCAACGTCCGTGAAGGGGCGGTGCAGAGCGTAATGGGCGCTTATCTGCTGACTTACGGTGTCTCACAGCTGTTTTATGGCCCGATTTCCGACCGCGTGGGCCGCCGACCGGTGATCCTCGTCGGAATGTCCATTTTTATGCTGGCAACGCTGGTCGCGGTCACGACCTCCAGTTTGACGGTGTTGATTGCCGCCAGCGCGATGCAGGGGATGGGCACCGGCGTTGGCGGCGTAATGGCGCGTACTTTACCGCGAGATTTATATGAACGGACACAGTTGCGCCATGCTAACAGCCTGTTAAACATGGGGATTCTCGTCAGTCCGTTGCTCGCACCGCTAATCGGCGGTCTGCTGGATACGATGTGGAACTGGCGCGCCTGTTATCTCTTTTTGTTGGTTCTTTGTGCTGGTGTGACCTTCAGTATGGCCCGCTGGATGCCGGAAACGCGTCCGGTCGATGCACCGCGCACGCGCCTGCTTACCAGTTATAAAACGCTTTTCGGTAACAGCGGTTTTAACTGTTATTTGCTGATGCTGATTGGCGGTCTGGCCGGGATTGCCGCCTTTGAAGCCTGCTCCGGCGTGCTGATGGGCGCGGTGTTAGGGCTGAGCAGTATGACGGTCAGTATTTTGTTTATTCTGCCGATTCCGGCAGCGTTTTTTGGCGCATGGTTTGCCGGACGTCCCAATAAACGCTTCTCCACGTTAATGTGGCAGTCGGTTATCTGCTGCCTGCTGGCTGGCTTGCTGATGTGGATCCCCGACTGGTTTGGCGTGATGAATGTCTGGACGCTGCTCGTTCCCGCCGCGCTGTTCTTTTTCGGTGCCGGGATGCTGTTTCCGCTGGCGACCAGCGGCGCGATGGAGCCGTTCCCCTTCCTGGCGGGCACGGCTGGCGCGCTGGTCGGCGGTCTGCAAAACATTGGTTCCGGCGTGCTGGCGTCGCTCTCTGCGATGTTGCCGCAAACCGGTCAGGGCAGCCTGGGGTTGTTGATGACCTTAATGGGATTGTTGATCGTGCTGTGCTGGCTGCCGCTGGCGACGCGGATGTCGCATCAGGGGCAGCCCGTTTAA", - "dna_sequence_length": 1185, - "functions": [ - "multidrug efflux system protein" - ], - "id": "CDS_3622", - "location": [ - [ - "NC_000913", - 3853922, - "+", - 1185 - ] - ], - "md5": "e6189bd6b341bff41e0ad31c596d22f3", - "parent_gene": "", - "protein_md5": "433a8c5b0af0a8dcf80c06fdde693613", - "protein_translation": "MKRQRNVNLLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDAPRTRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTLMGLLIVLCWLPLATRMSHQGQPV", - "protein_translation_length": 394, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31443" - ], - [ - "gene_synonym", - "ECK3665" - ], - [ - "gene_synonym", - "NP_418130.1" - ], - [ - "gene_synonym", - "GI:16131544" - ], - [ - "gene_synonym", - "JW3650" - ], - [ - "gene_synonym", - "ASAP:ABE-0012013" - ], - [ - "gene_synonym", - "b3674" - ], - [ - "gene_synonym", - "GeneID:948179" - ], - [ - "gene_synonym", - "yidF" - ], - [ - "gene_synonym", - "EcoGene:EG11694" - ] - ], - "dna_sequence": "ATGACAGGAAGTCAGGTCATTGATGCTGAAGAGGACAGGCATAAACTGGTTGTAGAGTACAAGGATGCTCTGCAACCTGCCGATTTTTATCACAATTTCAAACAGCGGGGCATCCGCTCCGTACAGCTCATTCCCTATCTTGAATTTGATGACCGGGGCGATCTGACGGCCGCTTCGGTGACAGCAGAGCTGTGGGGGAAATTTTTAATTGCCCTGTTCGAGTGTTGGGTGCGGGCAGATATCAGTCGTATCTCGATTGAGCTTTTTGACGCCACCTTACAAAAATGGTGTGGCAGCGAAAACCCGCAACCGCGCTGTGACTGCCAGGCGTGCGACTGGCATCGCCTGTGCCCGCACGCTCGGCAGGAGACGCCAGACAGCGTGCTTTGTGCGGGCTATCAGGCGTTTTATTCTTACTCCGCACCGCATATGCGGGTGATGCGTGATCTGATAAAGCAGCATCGTTCTCCCATGGAGCTGATGACGATGCTGCGGTGA", - "dna_sequence_length": 498, - "functions": [ - "putative Cys-type oxidative YidJ-maturating enzyme" - ], - "id": "CDS_3623", - "location": [ - [ - "NC_000913", - 3855611, - "-", - 498 - ] - ], - "md5": "86692e639c346426402d988aa095c4dc", - "parent_gene": "", - "protein_md5": "815d3e26f0732606ed252a69f9781385", - "protein_translation": "MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLIPYLEFDDRGDLTAASVTAELWGKFLIALFECWVRADISRISIELFDATLQKWCGSENPQPRCDCQACDWHRLCPHARQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMELMTMLR", - "protein_translation_length": 165, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418131.1" - ], - [ - "gene_synonym", - "yidG" - ], - [ - "gene_synonym", - "ECK3666" - ], - [ - "gene_synonym", - "ASAP:ABE-0012015" - ], - [ - "gene_synonym", - "JW3651" - ], - [ - "gene_synonym", - "GI:16131545" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADL6" - ], - [ - "gene_synonym", - "b3675" - ], - [ - "gene_synonym", - "GeneID:948191" - ], - [ - "gene_synonym", - "EcoGene:EG11695" - ] - ], - "dna_sequence": "ATGCCGGATAGCCGCAAAGCCAGACGCATTGCCGACCCAGGACTGCAGCCGGAGCGCACATCACTGGCGTGGTTTCGTACCATGCTGGGCTACGGCGCGTTGATGGCGTTGGCTATCAAACACAACTGGCACCAGGCGGGCATGTTATTCTGGATTTCGATTGGCATTCTCGCCATCGTGGCGCTGATCCTCTGGCACTACACCCGTAATCGCAATTTAATGGATGTCACGAATAGCGATTTTTCCCAATTTCACGTAGTCCGTGACAAATTTTTGATCTCCCTCGCGGTGTTATCTCTCGCAATACTGTTTGCTGTAACGCATATACATCAACTTATCGTATTTATTGAGAGAGTCGCATGA", - "dna_sequence_length": 363, - "functions": [ - "inner membrane protein" - ], - "id": "CDS_3624", - "location": [ - [ - "NC_000913", - 3855970, - "-", - 363 - ] - ], - "md5": "22fe33941389f892e3eb39b3232352d7", - "parent_gene": "", - "protein_md5": "14cc7c3a30d651857f5c0fbe80b7a9e9", - "protein_translation": "MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWHQAGMLFWISIGILAIVALILWHYTRNRNLMDVTNSDFSQFHVVRDKFLISLAVLSLAILFAVTHIHQLIVFIERVA", - "protein_translation_length": 120, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0012018" - ], - [ - "gene_synonym", - "ECK3667" - ], - [ - "gene_synonym", - "GI:16131546" - ], - [ - "gene_synonym", - "JW3652" - ], - [ - "gene_synonym", - "yidH" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADM0" - ], - [ - "gene_synonym", - "NP_418132.1" - ], - [ - "gene_synonym", - "b3676" - ], - [ - "gene_synonym", - "EcoGene:EG11696" - ], - [ - "gene_synonym", - "GeneID:948190" - ] - ], - "dna_sequence": "ATGAAAATTTCCCGCCTCGGAGAAGCGCCTGATTACCGCTTCTCGCTGGCTAATGAGCGTACTTTTCTGGCGTGGATCCGTACTGCACTAGGATTTCTGGCGGCGGGGGTTGGGCTTGATCAACTTGCGCCAGATTTCGCCACGCCCGTCATTCGCGAACTGCTGGCGTTGTTGTTGTGTCTGTTTTCCGGCGGGTTAGCGATGTATGGCTACTTGCGCTGGTTACGCAATGAAAAAGCGATGCGTCTGAAAGAGGACCTGCCCTACACCAACAGCTTATTAATCATTAGCTTAATATTGATGGTCGTGGCGGTGATCGTTATGGGACTGGTGTTGTATGCCGGATAG", - "dna_sequence_length": 348, - "functions": [ - "DUF202 family inner membrane protein" - ], - "id": "CDS_3625", - "location": [ - [ - "NC_000913", - 3856307, - "-", - 348 - ] - ], - "md5": "a203f6787511f25814afc8b61f5542d9", - "parent_gene": "", - "protein_md5": "ea3bb3b2b3d8f47b24456920edfefe29", - "protein_translation": "MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAPDFATPVIRELLALLLCLFSGGLAMYGYLRWLRNEKAMRLKEDLPYTNSLLIISLILMVVAVIVMGLVLYAG", - "protein_translation_length": 115, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31446" - ], - [ - "gene_synonym", - "JW3653" - ], - [ - "gene_synonym", - "ECK3668" - ], - [ - "gene_synonym", - "yidI" - ], - [ - "gene_synonym", - "ASAP:ABE-0012022" - ], - [ - "gene_synonym", - "NP_418133.1" - ], - [ - "gene_synonym", - "GeneID:948189" - ], - [ - "gene_synonym", - "b3677" - ], - [ - "gene_synonym", - "GI:16131547" - ], - [ - "gene_synonym", - "EcoGene:EG11697" - ] - ], - "dna_sequence": "ATGGGTATCATAGCTCAAAATAAAATCAGTTCATTGGGCATGCTGTTCGGTGCCATCGCTTTAATGATGGGGATTATCCACTTTTCATTCGGCCCTTTCTCCGCACCACCGCCAACGTTTGAAAGCATCGTGGCGGACAAAACGGCTGAAATTAAAAGAGGTCTTCTCGCCGGAATAAAAGGCGAAAAAATTACCACCGTGGAGAAAAAAGAGGACGTAGATGTCGATAAAATCCTCAATCAAAGCGGTATCGCACTGGCCATTGCTGCGCTACTTTGCGCATTTATTGGCGGTATGCGTAAGGAAAATCGCTGGGGCATTCGCGGCGCGCTGGTTTTTGGCGGCGGGACGCTGGCTTTCCATACCTTGCTTTTTGGTATCGGCATCGTGTGCAGCATTTTGCTGATATTCCTTATCTTTTCCTTCCTGACCGGCGGTTCACTGGTTTAA", - "dna_sequence_length": 450, - "functions": [ - "inner membrane protein" - ], - "id": "CDS_3626", - "location": [ - [ - "NC_000913", - 3856415, - "+", - 450 - ] - ], - "md5": "38c7e6527c6f379179dd1bd8f1d17f7c", - "parent_gene": "", - "protein_md5": "b2aac0f03eb34d4328fb96c850b370c9", - "protein_translation": "MGIIAQNKISSLGMLFGAIALMMGIIHFSFGPFSAPPPTFESIVADKTAEIKRGLLAGIKGEKITTVEKKEDVDVDKILNQSGIALAIAALLCAFIGGMRKENRWGIRGALVFGGGTLAFHTLLFGIGIVCSILLIFLIFSFLTGGSLV", - "protein_translation_length": 149, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31447" - ], - [ - "gene_synonym", - "GI:16131548" - ], - [ - "gene_synonym", - "ASAP:ABE-0012024" - ], - [ - "gene_synonym", - "yidJ" - ], - [ - "gene_synonym", - "JW3654" - ], - [ - "gene_synonym", - "ECK3669" - ], - [ - "gene_synonym", - "GeneID:948188" - ], - [ - "gene_synonym", - "EcoGene:EG11705" - ], - [ - "gene_synonym", - "NP_418134.1" - ], - [ - "gene_synonym", - "b3678" - ] - ], - "dna_sequence": "ATGAAACGCCCCAATTTTCTGTTCGTCATGACCGATACCCAGGCCACCAATATGGTCGGTTGCTATAGCGGTAAACCGCTGAATACGCAAAATATTGATAGTCTGGCGGCGGAAGGTATTCGCTTTAATTCCGCCTACACCTGTTCACCGGTTTGTACGCCTGCACGGGCCGGACTATTTACCGGTATCTACGCTAACCAGTCCGGCCCGTGGACCAACAACGTCGCGCCAGGCAAAAACATCTCCACTATGGGGCGCTACTTTAAGGATGCCGGCTATCACACCTGTTACATCGGCAAATGGCATCTCGACGGTCATGACTATTTCGGCACTGGCGAGTGTCCGCCGGAGTGGGACGCTGATTACTGGTTCGATGGGGCGAACTATCTTAGCGAACTGACGGAAAAAGAGATTAGCCTGTGGCGCAATGGCCTAAACAGCGTCGAAGATTTACAGGCGAACCATATCGACGAAACCTTCACCTGGGCGCATCGTATCAGCAATCGGGCGGTGGATTTTCTGCAACAGCCTGCGCGCGCAGACGAGCCTTTCCTGATGGTGGTTTCGTATGATGAGCCGCATCACCCGTTCACCTGTCCGGTGGAGTATTTAGAGAAATACGCTGATTTTTACTACGAGCTGGGCGAGAAAGCACAGGATGACCTGGCTAACAAACCGGAACATCACCGCTTATGGGCGCAGGCGATGCCATCGCCAGTCGGTGATGACGGGCTTTATCACCATCCGCTCTATTTTGCCTGTAATGACTTTGTTGATGACCAAATCGGACGGGTCATCAATGCCTTAACGCCAGAGCAACGTGAAAATACGTGGGTTATTTATACCTCCGATCACGGCGAAATGATGGGCGCACATAAGCTGATCAGTAAAGGGGCGGCGATGTATGACGACATCACCCGCATTCCGCTGATCATCCGTTCGCCGCAAGGGGAGCGGCGACAGGTCGATACGCCAGTCAGTCATATCGATTTACTGCCGACAATGATGGCGCTGGCAGATATTGAAAAACCAGAGATTCTGCCGGGGGAAAATATCCTTGCCGTGAAAGAGCCACGCGGCGTGATGGTGGAATTTAACCGCTACGAGATTGAGCATGACAGCTTTGGCGGTTTTATTCCGGTGCGTTGCTGGGTGACGGATGACTTTAAACTGGTACTCAACCTCTTCACCAGTGATGAACTTTACGATCGCCGTAATGACCCAAATGAAATGCATAACCTGATCGATGATATCCGTTTTGCAGACGTTCGCAGCAAAATGCATGACGCCTTATTGGATTACATGGACAAAATTCGCGATCCGTTCCGCAGTTACCAATGGAGTCTGCGTCCGTGGCGTAAAGATGCACGGCCGCGCTGGATGGGGGCGTTTCGTCCACGTCCACAAGATGGCTATTCGCCAGTTGTACGCGACTATGACACCGGCCTACCGACACAAGGGGTGAAGGTGGAGGAGAAAAAACAGAAGTTCTGA", - "dna_sequence_length": 1494, - "functions": [ - "sulfatase/phosphatase superfamily protein" - ], - "id": "CDS_3627", - "location": [ - [ - "NC_000913", - 3858404, - "-", - 1494 - ] - ], - "md5": "d1c6a877db0aac2c71a8916dbfb12f02", - "parent_gene": "", - "protein_md5": "f307558a86aefc0bfcb976cd0d5b8f60", - "protein_translation": "MKRPNFLFVMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLFTGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDADYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETFTWAHRISNRAVDFLQQPARADEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYELGEKAQDDLANKPEHHRLWAQAMPSPVGDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAAMYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRGVMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDELYDRRNDPNEMHNLIDDIRFADVRSKMHDALLDYMDKIRDPFRSYQWSLRPWRKDARPRWMGAFRPRPQDGYSPVVRDYDTGLPTQGVKVEEKKQKF", - "protein_translation_length": 497, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418135.1" - ], - [ - "gene_synonym", - "GI:16131549" - ], - [ - "gene_synonym", - "yidK" - ], - [ - "gene_synonym", - "JW3655" - ], - [ - "gene_synonym", - "GeneID:948185" - ], - [ - "gene_synonym", - "ASAP:ABE-0012026" - ], - [ - "gene_synonym", - "ECK3670" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31448" - ], - [ - "gene_synonym", - "b3679" - ], - [ - "gene_synonym", - "EcoGene:EG11706" - ] - ], - "dna_sequence": "ATGAATTCGTTACAAATCTTGAGTTTTGTCGGTTTTACGCTGCTGGTGGCGGTGATCACCTGGTGGAAGGTCCGCAAAACAGATACCGGATCGCAACAAGGCTATTTTCTTGCCGGACGTTCACTAAAAGCGCCGGTTATTGCCGCTTCGTTAATGCTAACCAACCTTTCCACGGAACAACTGGTCGGCCTTTCCGGGCAGGCCTACAAAAGCGGCATGTCGGTGATGGGCTGGGAAGTGACTTCAGCGGTGACGCTGATCTTCCTCGCGCTAATCTTTTTACCGCGCTATCTGAAGCGCGGCATTGCCACCATCCCCGATTTTCTGGAGGAACGTTATGATAAAACGACGCGTATTATCATCGACTTCTGCTTCCTAATTGCCACCGGCGTCTGCTTTCTGCCGATTGTTCTCTACTCCGGCGCGTTGGCGCTCAACAGCCTGTTTCACGTCGGGGAATCGCTACAGATTTCTCACGGTGCGGCTATCTGGCTACTGGTAATTTTGCTTGGTCTGGCGGGAATTTTGTATGCGGTGATCGGCGGACTGCGCGCAATGGCAGTGGCGGACTCCATCAACGGTATTGGGCTGGTTATCGGCGGGTTGATGGTGCCGGTATTTGGCCTAATCGCGATGGGCAAGGGCAGCTTTATGCAGGGCATTGAGCAACTCACCACCGTTCACGCCGAGAAATTAAACTCAATCGGTGGCCCGACCGATCCCTTGCCGATTGGCGCGGCATTTACCGGTTTGATTCTGGTGAACACCTTTTACTGGTGTACAAATCAGGGCATCGTGCAACGCACGCTGGCGTCAAAAAGCCTGGCGGAAGGGCAAAAGGGGGCGCTGTTAACGGCGGTGCTGAAAATGCTCGACCCGCTGGTACTGGTGCTGCCAGGGTTGATTGCGTTTCATCTGTATCAGGATTTACCGAAAGCCGACATGGCCTACCCGACGCTGGTCAATAACGTTCTGCCAGTGCCAATGGTGGGTTTCTTCGGCGCGGTGTTATTTGGTGCGGTGATCAGTACCTTCAACGGCTTTCTGAATAGCGCCAGTACGTTATTCAGTATGGGTATTTACCGTCGCATCATTAACCAGAATGCCGAGCCGCAGCAGCTGGTCACCGTCGGGCGCAAATTTGGTTTCTTTATCGCTATCGTTTCGGTGCTGGTCGCGCCGTGGATCGCCAACGCGCCGCAGGGGCTGTATAGCTGGATGAAACAGCTCAACGGCATTTACAACGTGCCGCTGGTTACCATCATCATTATGGGCTTTTTCTTCCCGCGCATCCCGGCGCTGGCGGCAAAAGTAGCGATGGGGATTGGCATAATCAGCTACATCACCATCAACTATCTGGTGAAGTTCGACTTCCATTTCCTCTATGTGCTGGCCTGTACGTTCTGCATCAACGTGGTCGTGATGCTGGTGATCGGTTTTATCAAACCGCGCGCCACGCCGTTCACCTTCAAAGATGCGTTTGCGGTGGACATGAAACCGTGGAAAAACGTCAAGATCGCGTCAATTGGCATCCTGTTCGCGATGATTGGCGTCTATGCCGGGCTGGCTGAATTCGGCGGCTACGGTACGCGCTGGTTAGCGATGATCAGTTATTTCATTGCCGCCGTAGTGATTGTCTACCTGATTTTTGACAGCTGGCGGCATCGTCACGACCCAGCCGTAACCTTTACTCCCGACGGGAAGGATAGCCTATGA", - "dna_sequence_length": 1716, - "functions": [ - "putative transporter" - ], - "id": "CDS_3628", - "location": [ - [ - "NC_000913", - 3860116, - "-", - 1716 - ] - ], - "md5": "29a4b93b37d34478d7331d32fe5f5f5e", - "parent_gene": "", - "protein_md5": "2f255d2b1caefd12af40e5ea13c5d380", - "protein_translation": "MNSLQILSFVGFTLLVAVITWWKVRKTDTGSQQGYFLAGRSLKAPVIAASLMLTNLSTEQLVGLSGQAYKSGMSVMGWEVTSAVTLIFLALIFLPRYLKRGIATIPDFLEERYDKTTRIIIDFCFLIATGVCFLPIVLYSGALALNSLFHVGESLQISHGAAIWLLVILLGLAGILYAVIGGLRAMAVADSINGIGLVIGGLMVPVFGLIAMGKGSFMQGIEQLTTVHAEKLNSIGGPTDPLPIGAAFTGLILVNTFYWCTNQGIVQRTLASKSLAEGQKGALLTAVLKMLDPLVLVLPGLIAFHLYQDLPKADMAYPTLVNNVLPVPMVGFFGAVLFGAVISTFNGFLNSASTLFSMGIYRRIINQNAEPQQLVTVGRKFGFFIAIVSVLVAPWIANAPQGLYSWMKQLNGIYNVPLVTIIIMGFFFPRIPALAAKVAMGIGIISYITINYLVKFDFHFLYVLACTFCINVVVMLVIGFIKPRATPFTFKDAFAVDMKPWKNVKIASIGILFAMIGVYAGLAEFGGYGTRWLAMISYFIAAVVIVYLIFDSWRHRHDPAVTFTPDGKDSL", - "protein_translation_length": 571, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:226524758" - ], - [ - "gene_synonym", - "GeneID:948186" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31449" - ], - [ - "gene_synonym", - "NP_418136.2" - ], - [ - "gene_synonym", - "JW3656" - ], - [ - "gene_synonym", - "yidL" - ], - [ - "gene_synonym", - "ECK3671" - ], - [ - "gene_synonym", - "ASAP:ABE-0012034" - ], - [ - "gene_synonym", - "EcoGene:EG11707" - ], - [ - "gene_synonym", - "b3680" - ] - ], - "dna_sequence": "ATGAATGGAAAATTGCAAAGTTCAGATGTAAAAAACGAAACTCCGTACAATATTCCCTTATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGCATTACCGGGTGATCTGGCCGCGGGACAAGAAGAAACCGCTTATCGCCAACTCATGGGTTGCGGTGTATACCGTACAAGGATGTGGGAAAATTCTTTTAAAGAATGGCGAACAAATAACACTGCATGGCAACTGTATTATATTCTTAAAGCCAATGGATATTCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCGTTGGTCAGCAAAGCGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCAGAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGTCTTATGTACGCAGATGGTAAAAAAGATCCACAACGGCGGCAAATTGAAAAATTAATTGCCACTTTACATGCCAGTCTGCAACAACGCTGGAGCGTAGCTGATATGGCTGCCACGATCCCCTGTAGCGAAGCCTGGTTGCGTCGTCTGTTTTTACGCTATACCGGCAAGACGCCGAAAGAATATTACCTCGATGCGCGTCTGGATCTGGCGCTATCGCTATTAAAGCAACAAGGAAACTCGGTTGGCGAAGTCGCTGATACGCTCAACTTCTTCGACTCCTTTCATTTCAGCAAAGCCTTTAAACATAAATTTGGTTATGCGCCGTCAGCCGTGCTAAAGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAA", - "dna_sequence_length": 894, - "functions": [ - "AraC family putative transcriptional regulator" - ], 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"gene_synonym", - "ASAP:ABE-0012036" - ], - [ - "gene_synonym", - "ASAP:ABE-0285077" - ] - ], - "dna_sequence": "ATGACCAAATTCTCAGTGGTTGTCGCAGGCGGTGGAAGCACCTTTACGCCAGGCATCGTGTTGATGCTCCTGGCGAATCAGGACCGTTTCCCGCTTCGTGCACTGAAATTTTATGATAACGATGGTGCGCGGCAGGAAGTGATTGCCGAAGCCTGTAAAGTCATCCTTAAAGAAAAAGCGCCGGACATTGCGTTTAGTTACACCACCGATCCTGAAGTGGCATTCAGCGACGTTGATTTTGTCATGGCGCACATCCGCGTCGGCAAATACCCGATGCGCGAACTGGATGAAAAAATCCCGCTGCGCCACGGCGTTGTTGGTCAGGAAACTTGCGGACCCGGCGGAATAGCGTACGGCATGCGTTCCATTGGCGGCGTCCTGGAACTGGTGGATTATATGGAAAAATATTCACCAAATGCCTGGATGCTCAACTACTCCAACCCGGCAGCCATTGTCGCAGAAGCCACGCGTCGTCTGCGCCCGAATGCGAAAATCCTCAACATCTGTGACATGCCAATCGGTATTGAAAGCCGGATGGCGCAAATTGTTGGGCTGCAAGATCGCAAACAGATGCGCGTGCGCTACTACGGCCTGAACCACTGGTGGTCGGCGATATCCCGCAGTTTCAGAAAGGGTTAATGAGTCAGCAAGTGGCGGTGGAAAAACTGGTCGTGGACGCCTGGGAACAGCGTTCATATCAGCACCTGTGGCAGGCGATTACGTTGTCGAAAACGGTACCGAGCGCCTCGGTCGCCAAAGCTATTCTGGATGAGTTGCTGGAGGCCAACAAAGCGTACTGGCCAGAGTTACGTTAA", - "dna_sequence_length": 815, - "id": "CDS_3630", - "location": [ - [ 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"ATGCTCAGTCAAATTCAACGCTTTGGCGGCGCGATGTTCACGCCAGTGCTGCTGTTTCCCTTCGCCGGGATTGTGGTGGGTCTTGCCATCTTGCTGCAAAACCCGATGTTTGTCGGGGAATCACTGACCGATCCGAACAGTTTATTCGCGCAAATCGTACACATTATTGAAGAGGGCGGTTGGACGGTATTCCGTAATATGCCGCTGATTTTTGCTGTCGGTTTACCCATTGGCCTTGCTAAGCAAGCGCAGGGGCGTGCTTGTCTGGCGGTGATGGTGAGTTTCCTGACCTGGAACTATTTCATCAACGCGATGGGAATGACCTGGGGAAGCTACTTCGGCGTCGATTTCACTCAGGACGCGGTGGCAGGTAGCGGTCTGACAATGATGGCCGGGATTAAAACCCTCGATACCAGCATTATCGGCGCAATTATCATTTCCGGCATTGTGACGGCGCTGCATAACCGTCTGTTCGATAAAAAACTGCCGGTTTTTCTCGGCATTTTCCAGGGGACGTCTTATGTGGTGATTATCGCCTTCCTGGTGATGATCCCCTGTGCCTGGCTGACGTTGCTCGGCTGGCCAAAAGTACAAATGGGGATTGAATCTCTGCAAGCGTTCCTGCGTTCGGCGGGTGCACTTGGGGTCTGGGTTTACACCTTCCTCGAACGTATTCTGATCCCAACCGGTTTACACCACTTCATCTACGGACAGTTTATCTTTGGTCCGGCAGCTGTTGAAGGCGGCATTCAGATGTACTGGGCGCAGCATCTGCAAGAGTTCAGTTTGAGCGCCGAGCCGCTGAAATCGTTGTTCCCGGAAGGCGGTTTTGCCCTGCACGGTAACTCAAAAATCTTTGGTGCCGTGGGCATTTCTTTAGCGATGTACTTCACTGCCGCACCGGAAAATCGGGTAAAAGTGGCGGGCTTGCTGATTCCCGCAACCTTAACCGCCATGCTGGTGGGAATTACCGAACCGCTGGAATTTACCTTCCTGTTCATTTCACCGTTGCTGTTTGCGGTACACGCCGTGCTGGCGGCCTCAATGTCGACCGTAATGTATCTCTTTGGTGTGGTGGGCAACATGGGCGGAGGTCTGATTGACTAGGTTTTACCGCAAAACTGGATCCCGATGTTCAGCAACCACGCGGATATGATGCTGACCCAAATCGCCATTGGGTTGTGCTTTACCCTGCTGTACTTCGTGGTTTTCCGCACACTGATTCTGCAGTTCAACATGTGCACGCCGGGACGTGAAGATGCGGAAGTGAAACTCTACTCAAAAGCCGAATACAAAGCCTCGCGAGGCCAAACCACCGCGGCAGAGCCAAAAAAAGAGCTGGATCAGGCTGCCGGTATCCTGCAAGCCCTGGGCGGGGTCGGCAATATCTCCAGCATTAACAATTGCGCGACGCGTTTACGTATTGCACTGCATGACATGTCACAAACGCTGGATGACGAAGTCTTTAAAAAGCTGGGAGCGCACGGCGTCTTCCGTAGTGGCGATGCCATTCAGGTGATCATTGGTCTGCATGTATCTCAGCTGCGTGAACAGCTCGATAGCTTAATTAATTCTCATCAATCAGCAGAAAATGTTGCCATTACGGAGGCAGTATAA", 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"b3684" - ], - [ - "gene_synonym", - "NP_418139.1" - ], - [ - "gene_synonym", - "GeneID:948194" - ], - [ - "gene_synonym", - "EcoGene:EG11711" - ] - ], - "dna_sequence": "ATGATCTACAAAAGCATTGCGGAGCGGTTAAGAATTCGACTTAACTCCGCAGATTTCACGCTAAACAGCCTTCTTCCCGGTGAAAAAAAGCTGGCGGAAGAGTTTGCGGTATCGCGGATGACCATCCGTAAAGCCATTGACCTGCTGGTAGCGTGGGGGCTGGTGGTCCGCCGCCACGGTAGTGGCACTTACCTGGTGCGCAAAGATGTACTGCATCAAACCGCCAGTCTGACCGGGCTGGTGGAGGTGTTAAAACGGCAGGGAAAAACGGTCACCAGCCAGGTGCTGATTTTTGAAATCATGCCTGCGCCTCCGGCCATTGCCAGCCAGTTACGGATTCAAATCAACGAGCAGATCTACTTCTCCCGTCGCGTTCGTTTTGTGGAAGGGAAACCGCTGATGCTGGAAGACAGCTATATGCCGGTAAAACTGTTCCGTAATCTTTCGCTGCAACATCTGGAAGGGTCGAAGTTTGAATATATTGAACAAGAGTGCGGGATTTTGATTGGCGGTAATTATGAAAGCCTGACGCCAGTGCTCGCCGATAGACTGCTGGCGCGGCAAATGAAGGTAGCGGAACACACGCCACTGCTGCGGATCACCTCGTTGTCATATAGCGAGAGCGGGGAGTTTTTGAATTATTCAGTGATGTTCAGAAATGCCAGCGAATACCAGGTGGAGTACCATTTACGGCGACTCCACCCGGAAAAGAGTTAA", - "dna_sequence_length": 717, - "functions": [ - "UTRA domain-containing GntR family putative transcriptional regulator" - ], - "id": "CDS_3632", - "location": [ - [ - "NC_000913", - 3863899, - "+", - 717 - ] - ], - "md5": "550fa76f235e9cff3208a5dec861c9df", - "parent_gene": "", - "protein_md5": "fcc0eb97f3b7f64b10af74d7f79c97a2", - "protein_translation": "MIYKSIAERLRIRLNSADFTLNSLLPGEKKLAEEFAVSRMTIRKAIDLLVAWGLVVRRHGSGTYLVRKDVLHQTASLTGLVEVLKRQGKTVTSQVLIFEIMPAPPAIASQLRIQINEQIYFSRRVRFVEGKPLMLEDSYMPVKLFRNLSLQHLEGSKFEYIEQECGILIGGNYESLTPVLADRLLARQMKVAEHTPLLRITSLSYSESGEFLNYSVMFRNASEYQVEYHLRRLHPEKS", - "protein_translation_length": 238, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418140.4" - ], - [ - "gene_synonym", - "JW3662" - ], - [ - "gene_synonym", - "GI:90111636" - ], - [ - "gene_synonym", - "yidE" - ], - [ - "gene_synonym", - "ECK3677" - ], - [ - "gene_synonym", - "yibE" - ], - [ - "gene_synonym", - "EcoGene:EG11536" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60872" - ], - [ - "gene_synonym", - "b3685" - ], - [ - "gene_synonym", - "ASAP:ABE-0012051" - ], - [ - "gene_synonym", - "GeneID:948193" - ] - ], - "dna_sequence": "ATGAGTGATATAGCATTAACGGTCAGTATTCTGGCTTTGGTGGCAGTCGTCGGTTTGTTTATCGGCAACGTCAAATTTCGCGGCATAGGATTAGGTATTGGCGGCGTGCTGTTTGGTGGGATCATCGTCGGCCATTTTGTTTCTCAGGCGGGGATGACATTAAGTAGCGATATGCTGCATGTTATTCAGGAATTTGGCCTGATCCTGTTCGTTTATACTATCGGGATTCAGGTAGGGCCGGGCTTCTTTGCCTCATTGCGCGTCTCCGGATTACGCCTCAACCTGTTTGCTGTTCTGATCGTCATCATCGGTGGTCTGGTTACCGCCATCCTGCATAAACTGTTTGATATTCCACTGCCGGTAGTGCTGGGGATTTTCTCCGGTGCGGTTACCAATACGCCAGCGCTGGGGGCAGGGCAGCAGATTTTGCGCGACCTGGGTACACCAATGGAAATGGTCGATCAGATGGGGATGAGTTACGCGATGGCGTATCCATTCGGCATTTGCGGGATTTTGTTCACCATGTGGATGTTGCGGGTTATTTTCCGCGTCAATGTCGAGACAGAAGCTCAGCAGCACGAGTCTTCACGCACCAATGGCGGCGCGCTGATCAAGACTATCAATATTCGCGTTGAGAACCCTAACCTGCATGATTTAGCCATTAAAGATGTACCGATTCTCAACGGCGACAAAATTATCTGCTCGCGTCTGAAACGCGAAGAAACCCTAAAAGTTCCTTCGCCAGATACCATTATCCAACTGGGCGATTTGCTGCATCTGGTGGGTCAGCCAGCGGATTTACATAATGCGCAACTGGTGATTGGTCAGGAGGTCGATACTTCGCTGTCCACGAAAGGCACTGATTTGCGCGTCGAGCGTGTGGTGGTCACCAATGAAAACGTGCTCGGAAAACGTATTCGCGACCTGCACTTTAAAGAACGCTATGACGTTGTTATCTCGCGCCTGAACCGTGCCGGGGTCGAACTGGTCGCCAGTGGCGATATCAGCCTGCAGTTCGGCGATATCCTCAATCTGGTGGGGCGTCCGTCCGCAATTGATGCCGTTGCCAATGTGCTGGGGAATGCGCAGCAAAAACTGCAACAGGTTCAGATGCTGCCAGTGTTTATTGGCATCGGGCTAGGCGTATTGTTAGGTTCTATTCCCGTCTTTGTGCCAGGATTCCCGGCCGCGTTGAAACTGGGGCTGGCGGGCGGACCGCTGATTATGGCGTTGATCCTCGGGCGTATCGGCAGTATCGGCAAGCTGTACTGGTTTATGCCGCCAAGCGCCAACCTCGCGCTGCGGGAGCTGGGGATCGTGCTGTTCCTCTCGGTCGTTGGTCTGAAATCTGGTGGGGATTTTGTGAATACCCTGGTCAATGGCGAAGGGCTAAGCTGGATTGGTTATGGTGCCCTGATCACCGCCGTTCCGCTGATTACTGTTGGCATTCTGGCGCGGATGTTAGCCAAAATGAATTACCTGACCATGTGCGGGATGCTGGCAGGTTCCATGACCGATCCTCCGGCGCTGGCGTTTGCTAATAATCTTCATCCAACCAGCGGTGCGGCGGCGCTCTCTTACGCCACTGTCTATCCGTTGGTAATGTTCCTGCGCATTATCACCCCCCAATTACTGGCGGTGCTCTTCTGGAGTATCGGTTAA", 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"gene_synonym", - "GI:90111637" - ], - [ - "gene_synonym", - "ASAP:ABE-0012054" - ], - [ - "gene_synonym", - "ECK3678" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C058" - ], - [ - "gene_synonym", - "hslS" - ], - [ - "gene_synonym", - "EcoGene:EG11535" - ], - [ - "gene_synonym", - "ibpB" - ], - [ - "gene_synonym", - "b3686" - ], - [ - "gene_synonym", - "NP_418141.2" - ], - [ - "gene_synonym", - "GeneID:948192" - ], - [ - "gene_synonym", - "htpE" - ] - ], - "dna_sequence": "ATGCGTAACTTCGATTTATCCCCACTGATGCGTCAATGGATCGGTTTTGACAAACTGGCCAACGCACTGCAAAACGCCGGTGAAAGCCAGAGCTTCCCGCCGTACAACATTGAGAAAAGCGACGATAACCACTACCGCATTACCCTTGCGCTGGCAGGTTTCCGTCAGGAAGATTTAGAGATTCAACTGGAAGGTACGCGCCTGAGCGTAAAAGGCACGCCGGAGCAGCCAAAAGAAGAGAAAAAATGGCTGCATCAAGGGCTTATGAATCAGCCATTTAGCCTGAGCTTTACGCTGGCTGAAAATATGGAAGTCTCTGGCGCAACCTTCGTAAACGGTTTACTGCATATTGATTTAATTCGTAATGAGCCTGAACCCATCGCAGCGCAGCGTATCGCTATCAGCGAACGTCCCGCGTTAAATAGCTAA", - "dna_sequence_length": 429, - "functions": [ - "heat shock chaperone" - ], - 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"ATGCGTAACTTTGATTTATCCCCGCTTTACCGTTCTGCTATTGGATTTGACCGTTTGTTTAACCACTTAGAAAACAACCAGAGCCAGAGTAATGGCGGCTACCCTCCGTATAACGTTGAACTGGTAGACGAAAACCATTACCGCATTGCTATCGCTGTGGCTGGTTTTGCTGAGAGCGAACTGGAAATTACCGCCCAGGATAATCTGCTGGTGGTGAAAGGTGCTCACGCCGACGAACAAAAAGAGCGCACCTATCTGTACCAGGGCATCGCTGAACGCAACTTTGAACGCAAATTCCAGTTAGCTGAGAACATTCATGTTCGTGGTGCTAACCTGGTAAATGGTTTGCTGTATATCGATCTCGAACGCGTGATTCCGGAAGCGAAAAAACCGCGCCGTATCGAAATCAACTAA", - "dna_sequence_length": 414, - "functions": [ - "heat shock chaperone" - ], - "id": "CDS_3635", - "location": [ - [ - "NC_000913", - 3867422, - "-", - 414 - ] - ], - "md5": "21942e4db460143b15c5e5d802453453", - "parent_gene": "", - "protein_md5": "6bb27f9960fa9182d82beeeeb4bc8a5c", - "protein_translation": "MRNFDLSPLYRSAIGFDRLFNHLENNQSQSNGGYPPYNVELVDENHYRIAIAVAGFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENIHVRGANLVNGLLYIDLERVIPEAKKPRRIEIN", - "protein_translation_length": 137, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5633" - ], - [ - "gene_synonym", - "ECK3680" - ], - [ - "gene_synonym", - "NP_418143.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0012063" - ], - [ - "gene_synonym", - "ecfI" - ], - [ - "gene_synonym", - "GI:90111638" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADM4" - ], - [ - "gene_synonym", - "yidQ" - ], - [ - "gene_synonym", - "b3688" - ], - [ - "gene_synonym", - "GeneID:948199" - ], - [ - "gene_synonym", - "EcoGene:EG11712" - ] - ], - "dna_sequence": "ATGATAAGAAATGTGTTGTTAGCGTTCATGATATGCAGCGGAATGACATTACTCGGAGGATGCTCCAGCGTGATGTCCCATACCGGAGGGAAAGAAGGAACGTATCCCGGCACCCGCGCCAGCGCAACCATGATTGGCGACGATGAAACCAACTGGGGCACTAAGTCGCTGGCGATTCTCGATATGCCGTTTACCGCTGTGATGGACACGCTTTTACTGCCGTGGGATGTGTTCCGCAAAGACAGCTCGGTGCGCTCGCGCGTTGAAAAAAGCGAAGCCAACGCGCAAGCCACCAATGCGGTTATTCCACCGGCCAGAATGCCTGATAACTGA", - "dna_sequence_length": 333, - "functions": [ - "DUF1375 family outer membrane protein" - ], - "id": "CDS_3636", - "location": [ - [ - "NC_000913", - 3867728, - "+", - 333 - ] - ], - "md5": "4fb41b22fc538e7420e6fccc1d7a2e6e", - "parent_gene": "", - "protein_md5": "4dd786d3f534a35c3fbd91e656d277f4", - "protein_translation": "MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRKDSSVRSRVEKSEANAQATNAVIPPARMPDN", - "protein_translation_length": 110, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3681" - ], - [ - "gene_synonym", - "NP_418144.3" - ], - [ - "gene_synonym", - "GeneID:948198" - ], - [ - "gene_synonym", - "GI:308209622" - ], - [ - "gene_synonym", - "ASAP:ABE-0012065" - ], - [ - "gene_synonym", - "yidR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31455" - ], - [ - "gene_synonym", - "b3689" - ], - [ - "gene_synonym", - "JW5860" - ], - [ - "gene_synonym", - "EcoGene:EG11713" - ] - ], - "dna_sequence": "ATGGCGGGACCCGTTTTGTATCAGGACCGCGCCATGAAACAGATAACCTTTGCTCCCCGTAATCACCTGCTCACCAATACCAATACCTGGACGCCCGACAGCCAGTGGCTGGTATTTGACGTGCGTCCTTCTGGCGCGTCGTTTACCGGCGAGACCATTGAGCGTGTGAATATCCATACCGGCGAGGTCGAGGTTATCTATCGCGCGTCACAGGGCGCACACGTCGGCGTGGTGACCGTTCATCCGAAGTCAGAGAAATATGTTTTCATCCACGGCCCGGAAAATCCTGATGAAACATGGCATTACGACTTCCATCATCGGCGCGGAGTGATTGTTGAAGGCGGCAAGATGAGTAACCTTGATGCGATGGATATTACCGCGCCGTATACGCCAGGAGTGCTGCGCGGCGGCAGCCATGTGCATGTCTTTAGCCCGAACGGTGAAAGGGTGAGCTTTACCTATAACGACCATGTAATGCATGAACTCGATCCGGCGCTGGATTTGCGAAACGTCGGTGTTGCTGCGCCGTTTGGCCCGGTCAACGTACAAAAGCAGCATCCGCGTGAATACAGCGGTAGCCACTGGTGCGTGCTGGTGAGCAAAACCACGCCCACGCCACAGCCTGGCAGTGATGAAATCAATCGTGCTTATGAAGAAGGATGGGTAGGAAATCACGCGCTGGCATTTATTGGCGACACACTTTCGCCAAAGGGCGAGAAAGTGCCGGAGCTGTTTATCGTTGAGTTACCGCAAGATGAAGCTGGCTGGAAAGCGGCAGGTGATGCGCCGTTAAGCGGAACGGAAACAACCCTGCCCGCGCCACCGCGTGGCGTCGTGCAGCGACGTTTAACCTTTACCCACCATCGGGCTTATCCGGGGTTAGTCAACGTCCCGCGCCACTGGGTGCGCTGTAATCCGCAGGGTACACAAATCGCGTTTTTAATGCGAGATGATAACGGCATTGTGCAACTGTGGCTTATCTCGCCACAGGGCGGCGAGCCGCGCCAGTTAACCCATAACAAAACGGATATTCAGTCTGCATTTAACTGGCATCCGTCAGGAGAATGGTTGGGCTTTGTGCTGGATAATCGAATTGCTTGTGCCCATGCGCAAAGCGGCGAGGTTGAGTATTTAACCGAACACCACGCCAATTCACCTTCTGCGGACGCCGTGGTCTTCTCGCCGGATGGTCAGTGGCTGGCGTGGATGGAAGGCGGCCAGCTGTGGATCACCGAAACTGATCGCTAA", 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"gene_synonym", - "GI:90111640" - ], - [ - "gene_synonym", - "yidS" - ], - [ - "gene_synonym", - "ASAP:ABE-0012068" - ], - [ - "gene_synonym", - "b3690" - ], - [ - "gene_synonym", - "GeneID:948197" - ], - [ - "gene_synonym", - "EcoGene:EG11714" - ], - [ - "gene_synonym", - "cbrA" - ] - ], - "dna_sequence": "ATGGAACATTTCGACGTGGCGATTATTGGCCTCGGCCCGGCAGGATCGGCGTTGGCACGAAAGTTAGCAGGCAAAATGCAGGTGATCGCGCTGGATAAAAAGCACCAGTGTGGTACTGAAGGTTTCAGCAAACCCTGCGGCGGTCTGCTGGCACCGGACGCGCAGCGATCTTTTATTCGCGATGGGCTGACGCTTCCTGTCGATGTGATCGCTAATCCGCAGATTTTCAGCGTCAAAACCGTCGACGTCGCCGCATCGCTCACGCGTAACTACCAGCGAAGCTATATCAATATTAATCGCCATGCTTTCGACTTGTGGATGAAATCGCTGATCCCCGCCAGCGTTGAGGTTTATCACGACAGCCTGTGCCGAAAAATCTGGCGTGAGGATGATAAATGGCATGTCATTTTTCGTGCAGACGGCTGGGAGCAACATATTACCGCCCGCTATCTGGTCGGTGCCGATGGCGCAAACTCGATGGTGCGGCGACATCTCTACCCGGATCATCAAATCCGTAAATATGTCGCTATCCAGCAGTGGTTCGCGGAGAAACATCCGGTGCCGTTCTACTCCTGCATCTTTGATAATTCGATAACTAACTGTTATTCATGGAGTATCAGCAAAGACGGTTATTTTATCTTTGGCGGTGCCTATCCAATGAAAGACGGTCAGACGCGTTTCACGACGCTGAAAGAGAAAATGAGCGCCTTTCAGTTCCAGTTTGGTAAGACGGTGAAAAGCGAAAAATGCACGGTGCTGTTTCCCTCGCGCTGGCAGGATTTTGTCTGCGGTAAGGACAACGCCTTTCTGATTGGTGAAGCGGCGGGATTTATCAGCGCCAGCTCGCTGGAGGGGATTAGCTATGCGCTGGATAGCACAGACATTCTGCGTTCGGTGTTACTGAAGCAGCCAGAGAAGCTCAATACCGCTTACTGGCGCGCCACCCGCAAACTGCGTTTAAAACTCTTCGGCAAGATAGTAAAAAGCCGATGCCTGACCGCACCGGCTTTAAGAAAGTGGATTATGCGCAGTGGTGTGGCACATATTCCACAGTTGAAGGATTAG", 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"gene_synonym", - "yidT" - ], - [ - "gene_synonym", - "GI:90111641" - ], - [ - "gene_synonym", - "b3691" - ], - [ - "gene_synonym", - "NP_418146.4" - ], - [ - "gene_synonym", - "GeneID:948196" - ], - [ - "gene_synonym", - "dgoT" - ], - [ - "gene_synonym", - "EcoGene:EG11715" - ] - ], - "dna_sequence": "ATGGATATTCCCGTTAATGCAGCAAAGCCGGGGCGTCGGCGTTATCTGACGCTGGTGATGATCTTTATTACGGTAGTCATTTGTTATGTCGACCGCGCCAACCTGGCCGTGGCTTCCGCCCATATTCAGGAAGAGTTCGGCATTACCAAAGCGGAAATGGGCTATGTATTTTCGGCCTTCGCCTGGCTTTATACGCTATGTCAGATCCCCGGCGGTTGGTTTTTAGATCGCGTAGGTTCTCGCGTGACTTATTTTATTGCGATATTTGGCTGGTCAGTGGCGACTTTATTCCAGGGCTTTGCCACGGGCTTAATGTCATTAATTGGTCTGCGCGCGATAACCGGTATTTTCGAAGCGCCTGCTTTCCCGACCAATAACCGGATGGTGACCAGCTGGTTCCCGGAACATGAACGCGCTTCTGCCGTTGGTTTTTATACGTCTGGTCAGTTTGTCGGTCTGGCGTTTCTGACGCCGCTGCTGATCTGGATTCAGGAGATGTTGAGCTGGCACTGGGTGTTCATTGTCACTGGTGGTATCGGCATTATCTGGTCGCTGATTTGGTTTAAGGTTTATCAGCCGCCGCGCCTGACCAAAGGTATCAGCAAAGCTGAACTGGATTACATTCGTGATGGCGGCGGTCTGGTGGATGGTGATGCGCCGGTGAAGAAAGAGGCGCGTCAGCCGTTAACAGCCAAAGACTGGAAACTGGTGTTCCATCGTAAACTGATCGGCGTTTATCTTGGGCAATTTGCGGTGGCTTCTACACTGTGGTTTTTCTTAACCTGGTTCCCGAACTATTTAACCCAGGAAAAAGGAATCACGGCGCTGAAAGCAGGCTTTATGACCACGGTGCCATTCCTCGCGGCGTTTGTCGGCGTCCTGCTCTCTGGCTGGGTAGCGGATCTGCTGGTACGTAAGGGCTTTTCACTGGGCTTTGCGCGTAAAACGCCGATTATCTGCGGCTTGCTGATCTCCACCTGCATTATGGGCGCTAACTACACTAACGATCCGATGATGATTATGTGCCTGATGGCGCTGGCATTCTTCGGTAACGGTTTTGCTTCGATTACCTGGTCGCTGGTTTCTTCTCTGGCACCGATGCGCCTGATTGGTTTAACCGGCGGCGTGTTTAACTTCGCCGGTGGTCTGGGCGGCATCACCGTTCCGCTGGTGGTGGGGTACCTGGCGCAGGGTTACGGTTTCGCACCTGCACTGGTTTATATCTCCGCCGTCGCGTTGATTGGCGCGCTCTCTTATATCCTGCTGGTGGGCGATGTGAAGCGCGTTGGCTAA", 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"UniProtKB/Swiss-Prot:Q6BF17" - ], - [ - "gene_synonym", - "JW5629" - ], - [ - "gene_synonym", - "b4478" - ], - [ - "gene_synonym", - "GeneID:2847765" - ], - [ - "gene_synonym", - "EcoGene:EG20050" - ], - [ - "gene_synonym", - "GI:49176390" - ], - [ - "gene_synonym", - "yidU" - ], - [ - "gene_synonym", - "YP_026237.1" - ] - ], - "dna_sequence": "ATGAAAATCACCAAAATTACCACGTATCGTTTACCTCCCCGCTGGATGTTCCTGAAAATTGAAACCGATGAAGGCGTGGTCGGTTGGGGCGAGCCCGTGATCGAAGGCCGCGCCCGTACGGTGGAAGCGGCAGTTCACGAGCTGGGTGACTATTTGATTGGTCAGGATCCATCGCGCATCAATGACTTATGGCAAGTGATGTATCGCGCCGGATTCTATCGCGGCGGTCCGATCCTGATGAGCGCCATCGCCGGGATTGACCAGGCGTTATGGGATATCAAAGGTAAAGTGCTGAATGCGCCGGTCTGGCAACTGATGGGCGGCCTGGTTCGCGACAAAATTAAAGCCTACAGTTGGGTTGGCGGCGATCGTCCGGCGGATGTTATCGACGGCATTAAAACGCTACGCGAAATCGGCTTCGATACCTTCAAACTGAACGGTTGTGAAGAACTGGGGCTAATTGATAACTCCCGCGCGGTAGATGCGGCGGTTAACACCGTGGCACAAATTCGTGAAGCTTTTGGCAATCAGATTGAGTTTGGTCTTGATTTCCACGGTCGCGTCAGCGCGCCGATGGCGAAAGTGCTGATTAAAGAACTGGAGCCGTATCGCCCGCTGTTTATTGAGGAGCCGGTGCTGGCGGAACAAGCCGAATACTACCCGAAACTGGCGGCACAAACGCATATTCCACTGGCGGCGGGTGAACGCATGTTCTCACGCTTCGATTTTAAACGCGTGCTGGAGGCAGGTGGTATTTCGATTCTGCAACCGGATCTCTCCCACGCGGGCGGTATTACCGAATGCTACAAAATCGCCGGAATGGCAGAAGCCTATGACGTGACCCTTGCGCCGCACTGTCCGCTCGGACCGATTGCACTGGCGGCTTGCCTGCATATCGACTTTGTTTCCTATAACGCCGTACTTCAGGAACAAAGTATGGGAATTCATTACAACAAAGGCGCGGAGTTACTCGACTTTGTGAAAAACAAAGAAGACTTCAGCATGGTCGGCGGCTTCTTTAAACCGTTAACGAAACCGGGCTTAGGCGTGGAAATCGACGAAGCTAAAGTGATTGAGTTCAGTAAAAATGCCCCGGACTGGCGTAATCCGCTCTGGCGTCATGAAGATAACAGCGTAGCAGAGTGGTAA", 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"gene_synonym", - "JW5628" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q6BF16" - ], - [ - "gene_synonym", - "dgoA" - ], - [ - "gene_synonym", - "GeneID:2847766" - ], - [ - "gene_synonym", - "yidU" - ], - [ - "gene_synonym", - "EcoGene:EG11716" - ] - ], - "dna_sequence": "ATGCAGTGGCAAACTAAACTCCCGCTGATCGCCATTTTGCGCGGTATTACGCCCGACGAGGCGCTGGCGCATGTTGGCGCGGTGATTGACGCCGGGTTCGACGCGGTTGAAATCCCGCTGAATTCCCCACAATGGGAGCAAAGCATTCCCGCCATCGTTGATGCGTACGGCGACAAGGCGTTGATTGGCGCAGGTACGGTACTGAAACCTGAACAGGTCGATGCGCTCGCCAGGATGGGCTGTCAGCTCATCGTTACGCCCAATATCCATAGTGAAGTGATCCGCCGTGCGGTGGGCTACGGCATGACCGTCTGCCCCGGCTGCGCGACGGCGACCGAAGCCTTTACCGCGCTCGAAGCGGGCGCGCAGGCGCTGAAAATATTTCCGTCATCGGCTTTTGGTCCGCAATACATCAAAGCGTTAAAAGCGGTATTGCCATCGGACATCGCAGTCTTTGCCGTTGGCGGCGTGACGCCAGAAAACCTGGCGCAGTGGATAGACGCAGGTTGTGCAGGGGCGGGCTTAGGCAGCGATCTCTATCGCGCCGGGCAATCCGTAGAGCGCACCGCGCAGCAGGCAGCAGCATTTGTTAAGGCGTATCGAGAGGCAGTGCAATGA", - "dna_sequence_length": 618, - "functions": [ - "2-oxo-3-deoxygalactonate 6-phosphate aldolase" - ], - "id": "CDS_3641", - "location": [ - [ - "NC_000913", - 3873612, - "-", - 618 - ] - ], - "md5": "afebc8d3c8bd57ffcdae913075ca89a7", - "parent_gene": "", - "protein_md5": "b1699e64fb45a8a9bf64c0c28e9319f2", - "protein_translation": "MQWQTKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALEAGAQALKIFPSSAFGPQYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYREAVQ", - "protein_translation_length": 205, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0012076" - ], - [ - "gene_synonym", - "JW3670" - ], - [ - "gene_synonym", - "dgoK" - ], - [ - "gene_synonym", - "GeneID:948207" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31459" - ], - [ - "gene_synonym", - "b3693" - ], - [ - "gene_synonym", - "yidV" - ], - [ - "gene_synonym", - "GI:16131561" - ], - [ - "gene_synonym", - "EcoGene:EG11717" - ], - [ - "gene_synonym", - "NP_418148.1" - ], - [ - "gene_synonym", - "ECK3686" - ] - ], - "dna_sequence": "ATGACAGCTCGCTACATCGCAATTGACTGGGGATCGACCAATCTGCGCGCCTGGCTTTATCAGGGCGACCACTGCCTGGAGAGCAGGCAATCAGAAGCAGGCGTCACGCGCCTGAACGGAAAATCTCCGGCTGCGGTGTTAGCAGAAGTCACGACCGACTGGCGTGAAGAGAAAACGCCAGTGGTAATGGCAGGAATGGTTGGCAGCAACGTCGGCTGGAAAGTTGCACCGTATTTATCTGTTCCTGCCTGTTTTTCGTCTATTGGCGAACAATTAACGTCAGTTGGCGACAATATCTGGATTATTCCCGGATTATGTGTCTCTCATGACGATAACCACAATGTGATGCGCGGCGAAGAAACACAATTGATCGGCGCGCGAGCTCTGGCTCCTTCCTCTCTTTATGTCATGCCCGGAACCCATTGCAAATGGGTGCAGGCCGATAGCCAGCAAATCAACGATTTTCGCACCGTGATGACCGGTGAATTACATCATTTACTGTTAAATCACTCATTGATTGGCGCAGGTTTGCCGCCGCAGGAAAACTCTGCCGATGCCTTCACAGCTGGCCTTGAGCGTGGTCTTAATACGCCCGCCATATTGCCGCAGCTTTTTGAAGTTCGCGCCTCGCATGTGCTGGGAACACTTCCCCGCGAACAGGTCAGCGAATTTCTCTCTGGTTTGTTGATTGGCGCAGAGGTCGCCAGTATGCGCGACTATGTGGCCCATCAACACGCCATCACCCTTGTCGCCGGAACATCGCTGACCGCGCGCTACCAGCAAGCCTTTCAGGCGATGGGTTGCGACGTGACGGCGGTGGCGGGCGACACGGCATTTCAGGCTGGTATAAGGAGCATCGCTCATGCAGTGGCAAACTAA", - "dna_sequence_length": 879, - "functions": [ - "2-oxo-3-deoxygalactonate kinase" - ], - "id": 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"UniProtKB/Swiss-Prot:P31460" - ], - [ - "gene_synonym", - "dgoR" - ] - ], - "dna_sequence": "ATGACTCTCAATAAAACCGATCGCATTGTCATTACGCTGGGTAAACAGATCGTTCACGGCAAATACGTGCCAGGCTCGCCGCTTCCGGCTGAGGCGGAACTCTGTGAGGAGTTTGCAACCTCGCGCAACATCATCCGTGAGGTGTTCCGTTCGCTGATGGCGAAGCGGCTGATTGAAATGAAACGTTATCGCGGGGCGTTTGTGGCACCGCGTAACCAGTGGAATTACCTCGACACTGACGTACTGCAATGGGTGCTGGAAAATGACTACGACCCACGGCTTATCAGTGCCATGAGCGAAGTGCGAAATCTGGTGGAACCGGCGATTGCCCGTTGGGCAGCAGAGCGCGCGACTTCCAGCGATCTGGCGCAGATTGAATCGGCGCTGAACGAGATGATTGCCAACAATCAGGACCGCGAAGCGTTTAACGAAGCGGATATTCGCTACCACGAGGCGGTGCTGCAGTCGGTGCATAACCCGGTGTTACAGCAACTTAGCATTGCGATCAGTTCGCTGCAGCGGGCGGTTTTTGAACGAACCTGGATGGGCGATGAGGCCAACATGCCGCAAACGCTCCAGGAACATAAGGCGCTGTTCGATGCGATACGACATCAGGACGGCGATGCGGCAGAGCAGGCGGCGCTTACCATGATCGCCAGCTCGACACGAAGGTTAAAGGAAATCACATGA", - "dna_sequence_length": 690, - "functions": [ - "D-galactonate catabolism operon transcriptional repressor" - ], - "id": "CDS_3643", - "location": [ - [ - "NC_000913", - 3875160, - "-", - 690 - ] - ], - "md5": "21c75389495ea65542f47e02a25b9547", - "parent_gene": "", - "protein_md5": "763f7017b7dc4d72eba1fdff27ead134", - "protein_translation": "MTLNKTDRIVITLGKQIVHGKYVPGSPLPAEAELCEEFATSRNIIREVFRSLMAKRLIEMKRYRGAFVAPRNQWNYLDTDVLQWVLENDYDPRLISAMSEVRNLVEPAIARWAAERATSSDLAQIESALNEMIANNQDREAFNEADIRYHEAVLQSVHNPVLQQLSIAISSLQRAVFERTWMGDEANMPQTLQEHKALFDAIRHQDGDAAEQAALTMIASSTRRLKEIT", - "protein_translation_length": 229, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0012084" - ], - [ - "gene_synonym", - "ECK3688" - ], - [ - "gene_synonym", - "GeneID:948202" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADM6" - ], - [ - "gene_synonym", - "b3696" - ], - [ - "gene_synonym", - "EcoGene:EG11719" - ], - [ - "gene_synonym", - "JW5858" - ], - [ - "gene_synonym", - "YP_026240.1" - ], - [ - "gene_synonym", - "yidX" - ], - [ - "gene_synonym", - "GI:49176393" - ] - ], - "dna_sequence": "ATGAAGTTGAATTTTAAGGGATTTTTTAAGGCTGCCGGTTTATTCCCACTGGCGCTGATGCTTTCAGGCTGTATCTCGTATGCTCTGGTTTCCCATACCGCAAAGGGTAGTTCAGGAAAGTATCAATCGCAGTCAGACACCATCACTGGGCTATCGCAGGCAAAAGATAGTAATGGAACAAAAGGCTATGTTTTTGTAGGGGAATCGCTGGATTACCTTATCACTGATGGTGCCGATGACATCGTTAAGATGCTCAATGATCCAGCACTTAACCGGCACAATATTCAGGTTGCCGATGACGCAAGATTTGTTTTAAATGCGGGGAAAAAGAAATTTACCGGCACAATATCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGTACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATTTAAAGTGCGATTTTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAA", - "dna_sequence_length": 657, - "functions": [ - "putative lipoprotein" - ], - "id": "CDS_3644", - "location": [ - [ - "NC_000913", - 3875438, - "+", - 657 - ] - ], - "md5": "a7e1913de989c70e63c8fc8146ea93ab", - "parent_gene": "", - "protein_md5": "3eb288760b77c59b1f530c4329ba989d", - "protein_translation": "MKLNFKGFFKAAGLFPLALMLSGCISYALVSHTAKGSSGKYQSQSDTITGLSQAKDSNGTKGYVFVGESLDYLITDGADDIVKMLNDPALNRHNIQVADDARFVLNAGKKKFTGTISLYYYWNNEEEKALATHYGFACGVQHCTRSLENLKGTIHEKNKNMDYSKVMAFYHPFKVRFYEYYSPRGIPDGVSAALLPVTVTLDIITAPLQFLVVYAVNQ", - "protein_translation_length": 218, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0012086" - ], - [ - "gene_synonym", - "yidA" - ], - [ - "gene_synonym", - "JW3674" - ], - [ - "gene_synonym", - "ECK3689" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8Y5" - ], - [ - "gene_synonym", - "GI:16131565" - ], - [ - "gene_synonym", - "b3697" - ], - [ - "gene_synonym", - "NP_418152.1" - ], - [ - "gene_synonym", - "GeneID:948204" - ], - [ - "gene_synonym", - "EcoGene:EG11195" - ] - ], - "dna_sequence": "ATGGCTATTAAACTCATTGCTATCGATATGGATGGCACCCTTCTGCTGCCCGATCACACCATTTCACCCGCCGTTAAAAATGCGATTGCCGCAGCTCGCGCCCGTGGCGTGAATGTCGTGCTAACGACGGGTCGCCCGTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCACCGTGGCGCAAACTGCTCTCAGCTATGACGACTATCGTTTCCTGGAAAAACTCTCTCGCGAAGTCGGTTCTCATTTCCACGCCCTGGACCGCACCACGCTGTACACCGCCAACCGTGATATCAGCTACTACACGGTGCATGAATCCTTCGTTGCCACCATTCCGCTGGTGTTCTGCGAAGCGGAGAAAATGGACCCCAATACCCAGTTCCTGAAAGTGATGATGATTGATGAACCCGCCATCCTCGACCAGGCTATCGCGCGTATTCCGCAGGAAGTGAAAGAGAAATATACCGTGCTGAAAAGTGCGCCGTACTTCCTCGAAATCCTCGATAAACGCGTTAACAAAGGTACGGGGGTGAAATCACTGGCCGACGTGTTAGGTATTAAACCGGAAGAAATCATGGCGATTGGCGATCAGGAAAACGATATCGCAATGATTGAATATGCAGGCGTCGGTGTGGCGATGGATAACGCTATTCCTTCAGTGAAAGAAGTGGCGAACTTTGTCACCAAATCTAACCTTGAAGATGGCGTGGCGTTTGCTATTGAGAAGTATGTGCTGAATTAA", - "dna_sequence_length": 813, - "functions": [ - "sugar phosphate phosphatase" - ], - "id": "CDS_3645", - "location": [ - [ - "NC_000913", - 3876952, - "-", - 813 - ] - ], - "md5": "8eefe61553ee095e7c52cb54c47433ec", - "parent_gene": "", - "protein_md5": "5ead7332b2e590892871a22450e06376", - "protein_translation": "MAIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAMDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVLN", - "protein_translation_length": 270, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yidB" - ], - [ - "gene_synonym", - "ECK3690" - ], - [ - "gene_synonym", - "JW3675" - ], - [ - "gene_synonym", - "ASAP:ABE-0012089" - ], - [ - "gene_synonym", - "GI:90111642" - ], - [ - "gene_synonym", - "EcoGene:EG11196" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09996" - ], - [ - "gene_synonym", - "GeneID:948212" - ], - [ - "gene_synonym", - "b3698" - ], - [ - "gene_synonym", - "NP_418153.4" - ] - ], - "dna_sequence": "ATGGGGCTTTTTGATGAAGTTGTCGGTGCCTTTCTGAAAGGCGATGCGGGGAAATATCAGGCTATTTTAAGTTGGGTTGAGGAGCAGGGCGGCATTCAGGTGCTGCTGGAAAAACTGCAAAGTGGCGGCTTAGGGGCCATTCTCTCAACCTGGCTGAGTAATCAACAGGGCAATCAATCGGTTAGTGGCGAGCAACTGGAATCGGCGCTCGGCACAAATGCGGTGTCCGATCTCGGGCAAAAACTTGGCGTGGATACCAGTACAGCTTCCAGTTTACTGGCAGAACAATTGCCGAAGATTATTGATGCGCTCTCACCGCAAGGTGAAGTGTCACCACAAGCCAATAACGATCTGCTTTCCGCAGGCATGGAACTGCTGAAAGGGAAACTCTTCCGCTAA", - "dna_sequence_length": 399, - "functions": [ - "DUF937 family protein" - ], - "id": "CDS_3646", - "location": [ - [ - "NC_000913", - 3877465, - "-", - 399 - ] - ], - "md5": "cc36b37414ec647f9881b1e0c06347c4", - "parent_gene": "", - "protein_md5": "aa99c7f0a081476fd12576321c53e5fe", - "protein_translation": "MGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQSGGLGAILSTWLSNQQGNQSVSGEQLESALGTNAVSDLGQKLGVDTSTASSLLAEQLPKIIDALSPQGEVSPQANNDLLSAGMELLKGKLFR", - "protein_translation_length": 132, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "nalC" - ], - [ - "gene_synonym", - "ECK3691" - ], - [ - "gene_synonym", - "Cou" - ], - [ - "gene_synonym", - "YP_026241.1" - ], - [ - "gene_synonym", - "parA" - ], - [ - "gene_synonym", - "JW5625" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AES6" - ], - [ - "gene_synonym", - "ASAP:ABE-0012093" - ], - [ - "gene_synonym", - "GeneID:948211" - ], - [ - "gene_synonym", - "acrB" - ], - [ - "gene_synonym", - "hisU" - ], - [ - "gene_synonym", - "EcoGene:EG10424" - ], - [ - "gene_synonym", - "GI:49176395" - ], - [ - "gene_synonym", - "pcbA" - ], - [ - "gene_synonym", - "gyrB" - ], - [ - "gene_synonym", - "b3699" - ], - [ - "gene_synonym", - "himB" - ], - [ - "gene_synonym", - "hopA" - ], - [ - "gene_synonym", - "pcpA" - ] - ], - "dna_sequence": "ATGTCGAATTCTTATGACTCCTCCAGTATCAAAGTCCTGAAAGGGCTGGATGCGGTGCGTAAGCGCCCGGGTATGTATATCGGCGACACGGATGACGGCACCGGTCTGCACCACATGGTATTCGAGGTGGTAGATAACGCTATCGACGAAGCGCTCGCGGGTCACTGTAAAGAAATTATCGTCACCATTCACGCCGATAACTCTGTCTCTGTACAGGATGACGGGCGCGGCATTCCGACCGGTATTCACCCGGAAGAGGGCGTATCGGCGGCGGAAGTGATCATGACCGTTCTGCACGCAGGCGGTAAATTTGACGATAACTCCTATAAAGTGTCCGGCGGTCTGCACGGCGTTGGTGTTTCGGTAGTAAACGCCCTGTCGCAAAAACTGGAGCTGGTTATCCAGCGCGAGGGTAAAATTCACCGTCAGATCTACGAACACGGTGTACCGCAGGCCCCGCTGGCGGTTACCGGCGAGACTGAAAAAACCGGCACCATGGTGCGTTTCTGGCCCAGCCTCGAAACCTTCACCAATGTGACCGAGTTCGAATATGAAATTCTGGCGAAACGTCTGCGTGAGTTGTCGTTCCTCAACTCCGGCGTTTCCATTCGTCTGCGCGACAAGCGCGACGGCAAAGAAGACCACTTCCACTATGAAGGCGGCATCAAGGCGTTCGTTGAATATCTGAACAAGAACAAAACGCCGATCCACCCGAATATCTTCTACTTCTCCACTGAAAAAGACGGTATTGGCGTCGAAGTGGCGTTGCAGTGGAACGATGGCTTCCAGGAAAACATCTACTGCTTTACCAACAACATTCCGCAGCGTGACGGCGGTACTCACCTGGCAGGCTTCCGTGCGGCGATGACCCGTACCCTGAACGCCTACATGGACAAAGAAGGCTACAGCAAAAAAGCCAAAGTCAGCGCCACCGGTGACGATGCGCGTGAAGGCCTGATTGCGGTCGTTTCCGTGAAAGTGCCGGACCCGAAATTCTCCTCCCAGACCAAAGACAAACTGGTTTCTTCTGAGGTGAAATCGGCGGTTGAACAGCAGATGAACGAACTGCTGGCAGAATACCTGCTGGAAAACCCAACCGACGCGAAAATCGTGGTTGGCAAAATTATCGATGCTGCCCGTGCCCGTGAAGCGGCGCGTCGCGCGCGTGAAATGACCCGCCGTAAAGGTGCGCTCGACTTAGCGGGCCTGCCGGGCAAACTGGCAGACTGCCAGGAACGCGATCCGGCGCTTTCCGAACTGTACCTGGTGGAAGGGGACTCCGCGGGCGGCTCTGCGAAGCAGGGGCGTAACCGCAAGAACCAGGCGATTCTGCCGCTGAAGGGTAAAATCCTCAACGTCGAGAAAGCGCGCTTCGATAAGATGCTCTCTTCTCAGGAAGTGGCGACGCTTATCACCGCGCTTGGCTGTGGTATCGGTCGTGACGAGTACAACCCGGACAAACTGCGTTATCACAGCATCATCATCATGACCGATGCGGACGTCGACGGCTCGCACATTCGTACGCTGCTGTTGACCTTCTTCTATCGTCAGATGCCGGAAATCGTTGAACGCGGTCACGTCTACATCGCTCAGCCGCCGCTGTACAAAGTGAAGAAAGGCAAGCAGGAACAGTACATTAAAGACGACGAAGCGATGGATCAGTACCAGATCTCTATCGCGCTGGACGGCGCAACGCTGCACACCAACGCCAGTGCACCGGCATTGGCTGGCGAAGCGTTAGAGAAACTGGTATCTGAGTACAACGCGACGCAGAAAATGATCAATCGTATGGAGCGTCGTTATCCGAAAGCAATGCTGAAAGAGCTTATCTATCAGCCGACGTTGACGGAAGCTGACCTTTCTGATGAGCAGACCGTTACCCGCTGGGTGAACGCGCTGGTCAGCGAACTGAACGACAAAGAACAGCACGGCAGCCAGTGGAAGTTTGATGTTCACACCAATGCTGAGCAAAACCTGTTCGAGCCGATTGTTCGCGTGCGTACCCACGGTGTGGATACTGACTATCCGCTGGATCACGAGTTTATCACCGGTGGCGAATATCGTCGTATCTGCACGCTGGGTGAGAAACTGCGTGGCTTGCTGGAAGAAGATGCGTTTATCGAACGTGGCGAGCGTCGTCAGCCGGTAGCCAGCTTCGAGCAGGCGCTGGACTGGCTGGTGAAAGAGTCCCGTCGCGGCCTCTCCATCCAGCGTTATAAAGGTCTGGGCGAGATGAACCCGGAACAGCTGTGGGAAACCACTATGGACCCGGAAAGTCGTCGTATGCTGCGCGTTACCGTTAAAGATGCGATTGCTGCCGACCAGTTGTTCACCACGCTGATGGGCGACGCCGTTGAACCGCGCCGTGCGTTTATTGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAA", - "dna_sequence_length": 2415, - "functions": [ - "DNA gyrase, subunit B" - ], - "id": "CDS_3647", - "location": [ - [ - "NC_000913", - 3880119, - "-", - 2415 - ] - ], - "md5": "14560374e6c4c040f4dbb174d4a14349", - "parent_gene": "", - "protein_md5": "162027c62ad186be3a31257d5026d55d", - "protein_translation": "MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMERRYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLFEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFEQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALKAANIDI", - "protein_translation_length": 804, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0012095" - ], - [ - "gene_synonym", - "ECK3692" - ], - [ - "gene_synonym", - "JW3677" - ], - [ - "gene_synonym", - "GeneID:948209" - ], - [ - "gene_synonym", - "recF" - ], - [ - "gene_synonym", - "b3700" - ], - [ - "gene_synonym", - "NP_418155.1" - ], - [ - "gene_synonym", - "EcoGene:EG10828" - ], - [ - "gene_synonym", - "uvrF" - ], - [ - "gene_synonym", - "GI:16131568" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7H0" - ] - ], - "dna_sequence": "ATGTCCCTCACCCGCTTGTTGATCCGCGATTTCCGCAACATTGAAACCGCGGATCTCGCCTTATCTCCCGGCTTTAACTTTCTGGTAGGTGCCAACGGCAGTGGCAAAACCAGCGTGCTGGAAGCCATCTATACGCTCGGCCATGGTCGGGCGTTTCGCAGTTTGCAGATTGGTCGCGTCATTCGCCATGAGCAGGAGGCGTTTGTTCTCCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAGGGCGACAGCAAAGTCCGCATCGACGGTACAGACGGGCATAAGGTCGCGGAACTGGCGCACCTGATGCCAATGCAGTTGATAACGCCAGAAGGGTTTACTTTACTCAACGGCGGCCCCAAATACAGAAGAGCATTCCTCGACTGGGGATGCTTTCACAACGAACCCGGATTTTTCACCGCCTGGAGCAATCTCAAGCGATTGCTCAAGCAGCGCAATGCGGCGCTGCGCCAGGTGACACGTTACGAACAGCTACGCCCGTGGGATAAAGAGCTGATCCCGCTGGCGGAGCAAATCAGCACCTGGCGCGCGGAGTATAGCGCCGGTATCGCGGCCGATATGGCTGATACCTGTAAGCAATTTCTCCCTGAGTTTTCTCTGACTTTCTCTTTCCAGCGCGGCTGGGAGAAAGAGACAGAATATGCTGAGGTGCTGGAACGTAATTTTGAACGCGATCGCCAGCTAACCTACACCGCGCACGGCCCGCACAAAGCGGACTTACGCATTCGCGCCGACGGTGCGCCGGTGGAAGATACCTTATCGCGTGGGCAGCTTAAGCTGTTGATGTGCGCCTTACGTCTGGCGCAAGGAGAGTTCCTCACCCGTGAAAGCGGGCGGCGGTGTCTCTACCTGATAGATGATTTTGCCTCTGAGCTTGATGATGAGCGTCGCGGGCTGCTTGCCAGCCGCTTAAAAGCGACGCAATCACAGGTCTTTGTCAGCGCGATCAGTGCTGAACACGTTATAGACATGTCGGACGAAAATTCGAAGATGTTTACCGTGGAAAAGGGTAAAATAACGGATTAA", - "dna_sequence_length": 1074, - "functions": [ - "gap repair protein" - ], - "id": "CDS_3648", - "location": [ - [ - "NC_000913", - 3881221, - "-", - 1074 - ] - ], - "md5": "24250f8d006e235de36f2c3890742db2", - "parent_gene": "", - "protein_md5": "173eedbbfd7d0508a102b28323e83932", - "protein_translation": "MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRVIRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTRYEQLRPWDKELIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTFSFQRGWEKETEYAEVLERNFERDRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYLIDDFASELDDERRGLLASRLKATQSQVFVSAISAEHVIDMSDENSKMFTVEKGKITD", - "protein_translation_length": 357, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0012098" - ], - [ - "gene_synonym", - "ECK3693" - ], - [ - "gene_synonym", - "GeneID:948218" - ], - [ - "gene_synonym", - "JW3678" - ], - [ - "gene_synonym", - "b3701" - ], - [ - "gene_synonym", - "NP_418156.1" - ], - [ - "gene_synonym", - "EcoGene:EG10242" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A988" - ], - [ - "gene_synonym", - "GI:16131569" - ], - [ - "gene_synonym", - "dnaN" - ] - ], - "dna_sequence": "ATGAAATTTACCGTAGAACGTGAGCATTTATTAAAACCGCTACAACAGGTGAGCGGTCCGTTAGGTGGTCGTCCTACGCTACCGATTCTCGGTAATCTGCTGTTACAGGTTGCTGACGGTACGTTGTCGCTGACCGGTACTGATCTCGAGATGGAAATGGTGGCACGTGTTGCGCTGGTTCAGCCACACGAGCCAGGAGCGACGACCGTTCCGGCGCGCAAATTCTTTGATATCTGCCGTGGTCTGCCTGAAGGCGCGGAAATTGCCGTGCAGCTGGAAGGTGAACGGATGCTGGTACGCTCCGGGCGTAGCCGTTTTTCGCTGTCTACCCTGCCAGCGGCGGATTTCCCGAACCTCGATGACTGGCAGAGTGAAGTCGAATTTACCCTGCCGCAGGCAACGATGAAGCGTCTGATTGAAGCGACCCAGTTTTCTATGGCGCATCAGGACGTTCGCTATTACTTAAATGGTATGCTGTTTGAAACCGAAGGTGAAGAACTGCGCACCGTGGCAACCGACGGCCACCGTCTGGCGGTCTGTTCAATGCCAATTGGTCAATCTTTGCCAAGCCATTCGGTGATCGTACCGCGTAAAGGCGTGATTGAACTGATGCGTATGCTCGACGGCGGCGACAATCCGCTGCGCGTACAGATTGGCAGCAACAACATTCGCGCCCACGTTGGCGACTTTATCTTCACCTCCAAACTGGTGGATGGTCGCTTCCCGGATTATCGCCGCGTTCTGCCGAAGAACCCGGACAAACATCTGGAAGCTGGCTGCGATCTGCTCAAGCAGGCGTTTGCTCGCGCGGCGATTCTCTCTAACGAGAAATTCCGCGGCGTACGTCTTTATGTCAGCGAAAACCAGCTGAAAATCACCGCCAACAACCCGGAACAGGAAGAAGCGGAAGAGATCCTCGACGTTACCTATAGCGGTGCGGAGATGGAAATCGGCTTCAACGTCAGTTATGTGCTGGATGTTCTGAACGCGCTGAAATGCGAAAACGTCCGCATGATGCTGACCGATTCGGTTTCCAGCGTGCAGATTGAAGATGCGGCCAGCCAGAGCGCGGCTTATGTTGTCATGCCAATGAGACTGTAA", - "dna_sequence_length": 1101, - "functions": [ - "DNA polymerase III, beta subunit" - ], - "id": "CDS_3649", - "location": [ - [ - "NC_000913", - 3882321, - "-", - 1101 - ] - ], - "md5": "a597756bc12f4a567a64a3981f926395", - "parent_gene": "", - "protein_md5": "b8c84d6f36a917c175c68a7edb9861d4", - "protein_translation": "MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSGRSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL", - "protein_translation_length": 366, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3694" - ], - [ - "gene_synonym", - "ASAP:ABE-0012103" - ], - [ - "gene_synonym", - "JW3679" - ], - [ - "gene_synonym", - "GeneID:948217" - ], - [ - "gene_synonym", - "hsm-2" - ], - [ - "gene_synonym", - "b3702" - ], - [ - "gene_synonym", - "dnaA" - ], - [ - "gene_synonym", - "EcoGene:EG10235" - ], - [ - "gene_synonym", - "GI:16131570" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03004" - ], - [ - "gene_synonym", - "NP_418157.1" - ] - ], - "dna_sequence": "GTGTCACTTTCGCTTTGGCAGCAGTGTCTTGCCCGATTGCAGGATGAGTTACCAGCCACAGAATTCAGTATGTGGATACGCCCATTGCAGGCGGAACTGAGCGATAACACGCTGGCCCTGTACGCGCCAAACCGTTTTGTCCTCGATTGGGTACGGGACAAGTACCTTAATAATATCAATGGACTGCTAACCAGTTTCTGCGGAGCGGATGCCCCACAGCTGCGTTTTGAAGTCGGCACCAAACCGGTGACGCAAACGCCACAAGCGGCAGTGACGAGCAACGTCGCGGCCCCTGCACAGGTGGCGCAAACGCAGCCGCAACGTGCTGCGCCTTCTACGCGCTCAGGTTGGGATAACGTCCCGGCCCCGGCAGAACCGACCTATCGTTCTAACGTAAACGTCAAACACACGTTTGATAACTTCGTTGAAGGTAAATCTAACCAACTGGCGCGCGCGGCGGCTCGCCAGGTGGCGGATAACCCTGGCGGTGCCTATAACCCGTTGTTCCTTTATGGCGGCACGGGTCTGGGTAAAACTCACCTGCTGCATGCGGTGGGTAACGGCATTATGGCGCGCAAGCCGAATGCCAAAGTGGTTTATATGCACTCCGAGCGCTTTGTTCAGGACATGGTTAAAGCCCTGCAAAACAACGCGATCGAAGAGTTTAAACGCTACTACCGTTCCGTAGATGCACTGCTGATCGACGATATTCAGTTTTTTGCTAATAAAGAACGATCTCAGGAAGAGTTTTTCCACACCTTCAACGCCCTGCTGGAAGGTAATCAACAGATCATTCTCACCTCGGATCGCTATCCGAAAGAGATCAACGGCGTTGAGGATCGTTTGAAATCCCGCTTCGGTTGGGGACTGACTGTGGCGATCGAACCGCCAGAGCTGGAAACCCGTGTGGCGATCCTGATGAAAAAGGCCGACGAAAACGACATTCGTTTGCCGGGCGAAGTGGCGTTCTTTATCGCCAAGCGTCTACGATCTAACGTACGTGAGCTGGAAGGGGCGCTGAACCGCGTCATTGCCAATGCCAACTTTACCGGACGGGCGATCACCATCGACTTCGTGCGTGAGGCGCTGCGCGACTTGCTGGCATTGCAGGAAAAACTGGTCACCATCGACAATATTCAGAAGACGGTGGCGGAGTACTACAAGATCAAAGTCGCGGATCTCCTTTCCAAGCGTCGATCCCGCTCGGTGGCGCGTCCGCGCCAGATGGCGATGGCGCTGGCGAAAGAGCTGACTAACCACAGTCTGCCGGAGATTGGCGATGCGTTTGGTGGCCGTGACCACACGACGGTGCTTCATGCCTGCCGTAAGATCGAGCAGTTGCGTGAAGAGAGCCACGATATCAAAGAAGATTTTTCAAATTTAATCAGAACATTGTCATCGTAA", 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"UniProtKB/Swiss-Prot:P0A7P5" - ], - [ - "gene_synonym", - "ECK3695" - ], - [ - "gene_synonym", - "EcoGene:EG10892" - ], - [ - "gene_synonym", - "GeneID:948216" - ], - [ - "gene_synonym", - "ASAP:ABE-0012115" - ], - [ - "gene_synonym", - "b3703" - ], - [ - "gene_synonym", - "GI:16131571" - ], - [ - "gene_synonym", - "rpmH" - ], - [ - "gene_synonym", - "rimA" - ], - [ - "gene_synonym", - "NP_418158.1" - ], - [ - "gene_synonym", - "ssaF" - ] - ], - "dna_sequence": "ATGAAACGCACTTTTCAACCGTCTGTACTGAAGCGCAACCGTTCTCACGGCTTCCGTGCTCGTATGGCTACTAAAAATGGTCGTCAGGTTCTGGCACGTCGTCGTGCTAAAGGCCGCGCTCGTCTGACCGTTTCTAAGTAA", - "dna_sequence_length": 141, - "functions": [ - "50S ribosomal subunit protein L34" - ], - "id": "CDS_3651", - "location": [ - [ - "NC_000913", - 3884336, - "+", - 141 - ] - ], - "md5": "a8dd07b7c699f4972c8b5864a235038e", - "parent_gene": "", - "protein_md5": "416a808f4fc13ba68768cf7d39153fcd", - "protein_translation": "MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK", - 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"CDS_3652", - "location": [ - [ - "NC_000913", - 3884493, - "+", - 360 - ] - ], - "md5": "4b84561c4cf24b2074b737be35812e3e", - "parent_gene": "", - "protein_md5": "050763380f55e07de0b31767905958a8", - "protein_translation": "MVKLAFPRELRLLTPSQFTFVFQQPQRAGTPQITILGRLNSLGHPRIGLTVAKKNVRRAHERNRIKRLTRESFRLRQHELPAMDFVVVAKKGVADLDNRALSEALEKLWRRHCRLARGS", - "protein_translation_length": 119, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:1450303" - ], - [ - "gene_synonym", - "JW3682" - ], - [ - "gene_synonym", - "b4557" - ], - [ - "gene_synonym", - "YP_588472.1" - ], - [ - "gene_synonym", - "yidD" - ], - [ - "gene_synonym", - "EcoGene:EG11348" - ], - [ - "gene_synonym", - "ECK3697" - ], - [ - "gene_synonym", - "ASAP:ABE-0285078" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8C8" - ], - [ - "gene_synonym", - "GI:94541129" - ] - ], - "dna_sequence": "ATGGCGCCGCCACTGTCGCCTGGCTCGCGGGTCCTGATAGCCCTCATTCGGGTCTATCAACGCCTGATTAGTCCGCTACTCGGGCCGCATTGTCGTTTCACTCCAACCTGTTCAAGCTACGGAATTGAGGCATTGCGCAGGTTTGGAGTGATAAAAGGCAGTTGGTTGACGGTGAAACGCGTATTAAAATGCCACCCTTTACACCCTGGTGGTGACGATCCCGTCCCGCCCGGACCATTTGATACCAGAGAACACTAA", - "dna_sequence_length": 258, - "functions": [ - "membrane protein insertion efficiency factor, UPF0161 family inner membrane protein" - ], - "id": "CDS_3653", - "location": [ - [ - "NC_000913", - 3884816, - "+", - 258 - ] - ], - "md5": "98d4cbaa7fe103bc46e998a63cb9fafa", - "parent_gene": "", - "protein_md5": "a8a802f0d44be64679e9db985d203e64", - "protein_translation": "MAPPLSPGSRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEALRRFGVIKGSWLTVKRVLKCHPLHPGGDDPVPPGPFDTREH", - "protein_translation_length": 85, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0012120" - ], - [ - "gene_synonym", - "yidC" - ], - [ - "gene_synonym", - "NP_418161.1" - ], - [ - "gene_synonym", - "JW3683" - ], - [ - "gene_synonym", - "b3705" - ], - [ - "gene_synonym", - "GeneID:948214" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25714" - ], - [ - "gene_synonym", - "ECK3698" - ], - [ - "gene_synonym", - "EcoGene:EG11197" - ], - [ - "gene_synonym", - "GI:16131573" - ] - ], - "dna_sequence": "ATGGATTCGCAACGCAATCTTTTAGTCATCGCTTTGCTGTTCGTGTCTTTCATGATCTGGCAAGCCTGGGAGCAGGATAAAAACCCGCAACCTCAGGCCCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCAACACCCGTGGTGGTGATGTTGAGCAAGCTCTGCTGCCTGCTTACCCGAAAGAGCTGAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGATAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGATGACGTATACCGACGCGGCAGGCAACACGTTTACCAAAACGTTTGTCCTGAAACGTGGTGATTACGCTGTCAACGTCAACTACAACGTGCAGAACGCTGGCGAGAAACCGCTGGAAATCTCCTCGTTTGGTCAGTTGAAGCAATCCATCACTCTGCCACCGCATCTCGATACCGGAAGCAGCAACTTCGCACTGCACACCTTCCGTGGCGCGGCGTACTCCACGCCTGACGAGAAGTATGAGAAATACAAGTTCGATACCATTGCCGATAACGAAAACCTGAACATCTCTTCGAAAGGTGGTTGGGTGGCGATGCTGCAACAGTATTTCGCGACGGCGTGGATCCCGCATAACGACGGTACCAACAACTTCTATACCGCTAATCTGGGTAACGGCATCGCCGCTATCGGCTATAAATCTCAGCCGGTACTGGTTCAGCCTGGTCAGACTGGCGCGATGAACAGCACCCTGTGGGTTGGCCCGGAAATCCAGGACAAAATGGCAGCTGTTGCTCCGCACCTGGATCTGACCGTTGATTACGGTTGGTTGTGGTTCATCTCTCAGCCGCTGTTCAAACTGCTGAAATGGATCCATAGCTTTGTGGGTAACTGGGGCTTCTCCATTATCATCATCACCTTTATCGTTCGTGGCATCATGTACCCGCTGACCAAAGCGCAGTACACCTCCATGGCGAAGATGCGTATGTTGCAGCCGAAGATTCAGGCAATGCGTGAGCGTCTGGGCGATGACAAACAGCGTATCAGCCAGGAAATGATGGCGCTGTACAAAGCTGAGAAGGTTAACCCGCTGGGCGGCTGCTTCCCGCTGCTGATCCAGATGCCAATCTTCCTGGCGTTGTACTACATGCTGATGGGTTCCGTTGAACTGCGTCAGGCACCGTTTGCACTGTGGATCCACGACCTGTCGGCACAGGACCCGTACTACATCCTGCCGATCCTGATGGGCGTAACGATGTTCTTCATTCAGAAGATGTCGCCGACCACAGTGACCGACCCGATGCAGCAGAAGATCATGACCTTTATGCCGGTCATCTTCACCGTGTTCTTCCTGTGGTTCCCGTCAGGTCTGGTGCTGTACTATATCGTCAGCAACCTGGTAACCATTATTCAGCAGCAGCTGATTTACCGTGGTCTGGAAAAACGTGGCCTGCATAGCCGCGAGAAGAAAAAATCCTGA", 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- ], - [ - "gene_synonym", - "ASAP:ABE-0012123" - ], - [ - "gene_synonym", - "mnmE" - ], - [ - "gene_synonym", - "JW3684" - ], - [ - "gene_synonym", - "GeneID:948222" - ], - [ - "gene_synonym", - "ECK3699" - ], - [ - "gene_synonym", - "thdF" - ], - [ - "gene_synonym", - "b3706" - ], - [ - "gene_synonym", - "GI:16131574" - ], - [ - "gene_synonym", - "trmE" - ], - [ - "gene_synonym", - "EcoGene:EG10997" - ], - [ - "gene_synonym", - "NP_418162.1" - ] - ], - "dna_sequence": "ATGAGCGATAATGACACTATCGTAGCCCAGGCCACGCCTCCGGGACGTGGCGGCGTTGGCATCCTGCGCATCTCCGGCTTCAAAGCCCGTGAAGTTGCCGAAACCGTGCTGGGTAAACTGCCTAAGCCGCGCTACGCCGATTATCTTCCGTTTAAAGACGCCGACGGCAGCGTGCTCGATCAGGGGATTGCGCTATGGTTCCCTGGCCCGAACTCGTTCACCGGCGAAGATGTGCTGGAACTGCAAGGTCATGGCGGTCCGGTGATCCTCGACCTGCTGTTAAAACGCATTCTGACCATTCCCGGCCTGCGGATTGCTCGCCCTGGTGAGTTTTCCGAACGCGCGTTTCTTAACGATAAACTTGACTTAGCCCAGGCCGAGGCGATTGCCGATCTTATCGACGCCAGTTCGGAACAGGCGGCCCGTTCGGCACTTAACTCGCTGCAAGGCGCATTCTCCGCACGGGTTAATCATCTGGTAGAAGCCCTCACCCACTTGCGCATTTACGTCGAAGCGGCAATTGATTTCCCCGATGAAGAGATCGATTTCCTCTCCGACGGAAAAATTGAAGCCCAGCTCAATGACGTTATTGCCGATCTTGATGCAGTGCGTGCTGAAGCACGTCAGGGTAGTTTGTTGCGCGAAGGGATGAAAGTGGTGATTGCCGGACGTCCTAACGCCGGTAAATCGAGCCTGTTAAACGCGCTGGCGGGGCGTGAAGCGGCAATCGTAACCGATATCGCCGGAACTACGCGTGACGTGCTGCGTGAGCATATCCACATTGACGGAATGCCGCTGCATATCATCGATACCGCCGGGCTACGTGAAGCCAGTGACGAAGTAGAACGTATTGGTATCGAGCGCGCGTGGCAGGAAATTGAACAGGCCGACCGCGTGCTGTTTATGGTCGATGGCACCACAACAGACGCCGTGGATCCGGCAGAGATCTGGCCGGAATTTATTGCCCGTCTGCCAGCGAAACTGCCGATCACCGTGGTGCGCAATAAAGCCGATATCACCGGCGAAACGCTGGGAATGAGTGAAGTGAACGGTCACGCGTTAATTCGTCTCTCGGCAAGGACTGGTGAAGGCGTGGACGTGCTGCGTAACCATCTCAAACAGAGCATGGGCTTTGACACCAACATGGAAGGCGGCTTCCTGGCGCGTCGTCGCCACCTACAGGCGCTGGAACAGGCAGCGGAACATCTACAACAGGGCAAAGCGCAACTGTTGGGAGCCTGGGCAGGTGAACTGCTGGCGGAAGAGTTGCGTCTGGCACAGCAGAACTTAAGCGAAATCACCGGGGAATTTACTTCAGACGACCTGCTGGGGCGGATTTTCTCCAGCTTCTGTATTGGTAAGTAA", 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"GeneID:948223" - ], - [ - "gene_synonym", - "ASAP:ABE-0012128" - ], - [ - "gene_synonym", - "b3707" - ], - [ - "gene_synonym", - "tnaL" - ], - [ - "gene_synonym", - "NP_418163.1" - ], - [ - "gene_synonym", - "ECK3700" - ], - [ - "gene_synonym", - "GI:16131575" - ], - [ - "gene_synonym", - "EcoGene:EG11276" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD89" - ] - ], - "dna_sequence": "ATGAATATCTTACATATATGTGTGACCTCAAAATGGTTCAATATTGACAACAAAATTGTCGATCACCGCCCTTGA", - "dna_sequence_length": 75, - "functions": [ - "tryptophanase leader peptide" - ], - "id": "CDS_3656", - "location": [ - [ - "NC_000913", - 3888435, - "+", - 75 - ] - ], - "md5": "0943c06abee7a985236a95ac961ff78e", - "parent_gene": "", - "protein_md5": "b30ce09bc7c4b1d35e8b7ca02a233192", - "protein_translation": "MNILHICVTSKWFNIDNKIVDHRP", - "protein_translation_length": 24, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tnaA" - ], - [ - "gene_synonym", - "ASAP:ABE-0012133" - ], - [ - "gene_synonym", - "b3708" - ], - [ - "gene_synonym", - "JW3686" - ], - [ - "gene_synonym", - "NP_418164.4" - ], - [ - "gene_synonym", - "ECK3701" - ], - [ - "gene_synonym", - "GI:90111643" - ], - [ - "gene_synonym", - "EcoGene:EG11005" - ], - [ - "gene_synonym", - "ind" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A853" - ], - [ - "gene_synonym", - "GeneID:948221" - ] - ], - "dna_sequence": "ATGGAAAACTTTAAACATCTCCCTGAACCGTTCCGCATTCGTGTTATTGAGCCAGTAAAACGTACCACTCGCGCTTATCGTGAAGAGGCAATTATTAAATCCGGTATGAACCCGTTCCTGCTGGATAGCGAAGATGTTTTTATCGATTTACTGACCGACAGCGGCACCGGGGCGGTGACGCAGAGCATGCAGGCTGCGATGATGCGCGGCGACGAAGCCTACAGCGGCAGTCGTAGCTACTATGCGTTAGCCGAGTCAGTGAAAAATATCTTTGGTTATCAATACACCATTCCGACTCACCAGGGCCGTGGCGCAGAGCAAATCTATATTCCGGTACTGATTAAAAAACGCGAGCAGGAAAAAGGCCTGGATCGCAGCAAAATGGTGGCGTTCTCTAACTATTTCTTTGATACCACGCAGGGCCATAGCCAGATCAACGGCTGTACCGTGCGTAACGTCTATATCAAAGAAGCCTTCGATACGGGCGTGCGTTACGACTTTAAAGGCAACTTTGACCTTGAGGGATTAGAACGCGGTATTGAAGAAGTTGGTCCGAATAACGTGCCGTATATCGTTGCAACCATCACCAGTAACTCTGCAGGTGGTCAGCCGGTTTCACTGGCAAACTTAAAAGCGATGTACAGCATCGCGAAGAAATACGATATTCCGGTGGTAATGGACTCCGCGCGCTTTGCTGAAAACGCCTATTTCATCAAGCAGCGTGAAGCAGAATACAAAGACTGGACCATCGAGCAGATCACCCGCGAAACCTACAAATATGCCGATATGCTGGCGATGTCCGCCAAGAAAGATGCGATGGTGCCGATGGGCGGCCTGCTGTGCATGAAAGACGACAGCTTCTTTGATGTGTACACCGAGTGCAGAACCCTTTGCGTGGTGCAGGAAGGCTTCCCGACATATGGCGGCCTGGAAGGCGGCGCGATGGAGCGTCTGGCGGTAGGTCTGTATGACGGCATGAATCTCGACTGGCTGGCTTATCGTATCGCGCAGGTACAGTATCTGGTCGATGGTCTGGAAGAGATTGGCGTTGTCTGCCAGCAGGCGGGCGGTCACGCGGCATTCGTTGATGCCGGTAAACTGTTGCCGCATATCCCGGCAGACCAGTTCCCGGCACAGGCGCTGGCCTGCGAGCTGTATAAAGTCGCCGGTATCCGTGCGGTAGAAATTGGCTCTTTCCTGTTAGGCCGCGATCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAA", 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"b3709" - ], - [ - "gene_synonym", - "ASAP:ABE-0012135" - ], - [ - "gene_synonym", - "JW5622" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23173" - ], - [ - "gene_synonym", - "NP_418165.1" - ], - [ - "gene_synonym", - "ECK3702" - ], - [ - "gene_synonym", - "tnaP" - ], - [ - "gene_synonym", - "EcoGene:EG11006" - ], - [ - "gene_synonym", - "GeneID:948220" - ], - [ - "gene_synonym", - "trpP" - ], - [ - "gene_synonym", - "GI:16131577" - ] - ], - "dna_sequence": "ATGACTGATCAAGCTGAAAAAAAGCACTCTGCATTTTGGGGTGTTATGGTTATAGCAGGTACAGTAATTGGTGGAGGTATGTTTGCTTTACCTGTTGATCTTGCCGGTGCCTGGTTTTTCTGGGGTGCCTTTATCCTTATCATTGCCTGGTTTTCAATGCTTCATTCCGGGTTATTGTTATTAGAAGCAAATTTAAATTATCCCGTCGGCTCCAGTTTTAACACCATCACCAAAGATTTAATCGGTAACACCTGGAACATTATCAGCGGTATTACCGTTGCCTTCGTTCTCTATATCCTCACTTATGCCTATATCTCTGCTAATGGTGCGATCATTAGTGAAACGATATCAATGAATTTGGGTTATCACGCTAATCCACGTATTGTCGGGATCTGCACAGCCATTTTCGTTGCCAGCGTATTGTGGTTAAGTTCGTTAGCCGCCAGTCGTATTACCTCATTGTTCCTCGGGCTGAAGATTATCTCCTTTGTGATCGTGTTTGGTTCTTTTTTCTTCCAGGTCGATTACTCCATTCTGCGCGACGCCACCAGCTCCACTGCGGGAACGTCTTACTTCCCGTATATCTTTATGGCTTTGCCGGTGTGTCTGGCGTCATTTGGTTTCCACGGCAATATTCCCAGCCTGATTATTTGCTATGGAAAACGCAAAGATAAGTTAATCAAAAGCGTGGTATTTGGTTCGCTGCTGGCGCTGGTGATTTATCTCTTCTGGCTCTATTGCACCATGGGGAATATTCCGCGAGAAAGCTTTAAGGCGATTATCTCCTCAGGCGGCAACGTTGATTCGCTGGTGAAATCGTTCCTCGGCACCAAACAGCACGGCATTATCGAGTTTTGCCTGCTGGTGTTCTCTAACTTAGCTGTTGCCAGTTCGTTCTTTGGTGTCACGCTGGGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCGTTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGTGCTTGCAATCAAAGCTCGCAAGAAGTTTCCCAATCAGATGTTCACGGTCTGGGGCGGCAATCTTATTCCGGCGATTGTCATTCTCTTTGGTATAACCGTGATTTTGTGCTGGTTCGGCAACGTCTTTAACGTGTTACCTAAATTTGGCTAA", 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"UniProtKB/Swiss-Prot:P31462" - ], - [ - "gene_synonym", - "b3710" - ], - [ - "gene_synonym", - "ECK3703" - ], - [ - "gene_synonym", - "EcoGene:EG11720" - ], - [ - "gene_synonym", - "NP_418166.1" - ], - [ - "gene_synonym", - "yidY" - ], - [ - "gene_synonym", - "GI:16131578" - ], - [ - "gene_synonym", - "mdtL" - ] - ], - "dna_sequence": "ATGTCCCGCTTTTTGATTTGTAGTTTTGCCCTGGTTTTACTTTATCCCGCCGGGATTGATATGTACCTCGTTGGTTTACCGCGCATCGCCGCCGATCTCAATGCCAGCGAAGCGCAGTTGCATATTGCGTTCTCCGTATATCTGGCGGGGATGGCAGCTGCGATGTTATTTGCCGGTAAAGTGGCCGATCGTTCAGGGAGAAAGCCGGTCGCCATACCCGGCGCGGCGCTATTTATTATTGCCTCGGTGTTCTGTTCACTGGCTGAAACCAGCACGTTATTTCTTGCAGGCCGATTTCTACAGGGGTTGGGCGCAGGCTGTTGTTACGTAGTGGCGTTCGCTATTTTGCGCGACACGCTGGATGATCGACGTCGGGCTAAAGTGCTGTCATTACTCAACGGTATTACCTGCATCATTCCGGTGTTAGCGCCAGTGCTCGGACATCTGATTATGCTTAAATTCCCGTGGCAGAGTCTGTTCTGGGCGATGGCAATGATGGGCATCGCGGTACTGATGTTGTCTTTGTTTATTTTAAAAGAAACGCGCCCAGCGGCCCCCGCAGCTTCGGATAAACCACGAGAAAATAGCGAGTCGCTGCTTAACCGTTTTTTCCTCAGCCGTGTTGTTATCACCACCCTCAGCGTTTCGGTGATCCTCACTTTCGTCAACACGTCACCGGTATTGCTGATGGAAATCATGGGGTTTGAGCGCGGTGAATACGCCACCATTATGGCGCTGACCGCTGGCGTCAGCATGACCGTTTCATTCTCCACGCCATTTGCGCTGGGAATTTTTAAGCCACGTACGTTGATGATCACCTCGCAGGTGTTATTCCTGGCGGCGGGGATCACTCTTGCCGTTTCACCTTCCCATGCGGTTTCTCTGTTTGGTATCACGCTGATTTGCGCCGGTTTCTCGGTAGGTTTTGGTGTGGCGATGAGTCAGGCGTTAGGGCCGTTTTCATTACGCGCGGGCGTAGCCAGCTCGACCTTAGGTATTGCGCAGGTTTGCGGTTCGTCACTGTGGATTTGGCTGGCAGCGGTGGTTGGTATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGA", - "dna_sequence_length": 1176, - "functions": [ - "multidrug efflux system protein" - ], - "id": "CDS_3659", - "location": [ - [ - "NC_000913", - 3891615, - "+", - 1176 - ] - ], - "md5": "1927daefec1a56c73478295f3fa9cef9", - "parent_gene": "", - "protein_md5": "3f21ff6cf1010b05b352686e724f547c", - "protein_translation": "MSRFLICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKVADRSGRKPVAIPGAALFIIASVFCSLAETSTLFLAGRFLQGLGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFWAMAMMGIAVLMLSLFILKETRPAAPAASDKPRENSESLLNRFFLSRVVITTLSVSVILTFVNTSPVLLMEIMGFERGEYATIMALTAGVSMTVSFSTPFALGIFKPRTLMITSQVLFLAAGITLAVSPSHAVSLFGITLICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVVGIGAWNMLIGILIACSIVSLLLIMFVAPGRPVAAHEEIHHHA", - "protein_translation_length": 391, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948227" - ], - [ - "gene_synonym", - "JW3689" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31463" - ], - [ - "gene_synonym", - "b3711" - ], - [ - "gene_synonym", - "ASAP:ABE-0012141" - ], - [ - "gene_synonym", - "ECK3704" - ], - [ - "gene_synonym", - "EcoGene:EG11721" - ], - [ - "gene_synonym", - "yidZ" - ], - [ - "gene_synonym", - "NP_418167.1" - ], - [ - "gene_synonym", - "GI:16131579" - ] - ], - "dna_sequence": "ATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGCGGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCTGGGTCTGTCGCCCACACCGCTGATGGTCAGCATGGAGCAAAATCTGGCGGAGTGGATGCAAATGAGCAACCTGCTGCTGGATAAACCGCACCACCAGACACCGCGCGGCCTGAAGTTTGAGCTGGCGGCGGAATCACCGCTGATGATGATCATGCTTAATGCGCTGTCGAAACAGATCTACCAACGTTACCCGCAGGCGACCATCAAATTACGTAACTGGGATTACGATTCCTTAGATGCCATTACTCGTGGTGAAGTGGATATCGGTTTTTCCGGTCGCGAAAGCCATCCTCGCTCGCGGGAGCTGTTAAGCTCGCTACCGTTAGCCATTGATTATGAAGTGCTGTTTAGTGATGTGCCCTGCGTCTGGTTACGCAAAGATCATCCGGCACTGCATCAAACGTGGAATCTGGACACCTTCTTACGTTATCCGCATATCAGCATTTGCTGGGAACAGAGCGATACCTGGGCGCTGGACAATGTGTTACAGGAGCTGGGACGCGAACGCACGATTGCTATGAGCCTGCCGGAATTCGAGCAGTCACTGTTTATGGCAGCGCAACCCGACAATCTGCTACTGGCGACCGCGCCGCGCTACTGTCAGTACTACAATCAACTCCATCAACTGCCGTTGGTTGCTCTTCCTCTCCCGTTTGACGAAAGCCAGCAAAAAAAGCTGGAAGTTCCTTTTACCCTGCTGTGGCATAAACGGAACAGCCATAATCCGAAGATCGTCTGGTTACGGGAAACCATTAAAAACCTTTACGCGTCGATGGCATAA", - "dna_sequence_length": 960, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_3660", - "location": [ - [ - "NC_000913", - 3892765, - "+", - 960 - ] - ], - "md5": "9ba0249aa257debdc588dfd34e449f2a", - "parent_gene": "", - "protein_md5": "50f91f29bb61437fe6b2e9c771da0216", - "protein_translation": "MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA", - "protein_translation_length": 319, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:226524759" - ], - [ - "gene_synonym", - "GeneID:948226" - ], - [ - "gene_synonym", - "yieE" - ], - [ - "gene_synonym", - "b3712" - ], - [ - "gene_synonym", - "JW3690" - ], - [ - "gene_synonym", - "NP_418168.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0012144" - ], - [ - "gene_synonym", - "ECK3705" - ], - [ - "gene_synonym", - "EcoGene:EG11722" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADM8" - ] - ], - "dna_sequence": "ATGGCGACTCACTTTGCCCGAGGGATTTTAACGGAAGGACATCTGATTTCTGTTCGTCTCCCCTCCCAGTGTCATCAAGAAGCCCGAAACATTCCCCCTCATCGTCAAAGCCGTTTTCTGGCGTCCAGAGGTTTACTCGCAGAACTGATGTTCATGCTGTATGGCATTGGCGAATTGCCGGAAATCGTCACCCTGCCGAAAGGTAAACCGGTTTTCAGTGATAAAAATTTGCCTTCGTTTTCCATTTCCTATGCCGGGAATATGGTTGGCGTGGCGTTAACAACCGAAGGTGAATGTGGCCTCGATATGGAACTACAGCGTGCGACGCGCGGGTTTCATAGCCCACACGCGCCCGATAACCACACCTTTTCCAGCAATGAATCGCTATGGATCAGTAAACAAAACGATCCTAACGAAGCGCGGGCGCAGCTCATCACGCTGCGCCGAAGCGTGCTAAAACTAACCGGTGATGTTTTGAATGACGATCCGCGCGATCTGCAGCTGCTGCCCATTGCCGGACGCCTGAAATGTGCTCATGTAAATCATGTAGAAGCGTTATGCGACGCGGAAGACGTGCTGGTGTGGTCCGTGGCGGTCACGCCCACGATTGAAAAGCTCAGTGTCTGGGAGTTAGATGGCAAACACGGCTGGAAAAGCCTGCCGGATATTCACAGCCGCGCCAACAATCCTACCAGCCGGATGATGCGTTTTGCCCAACTCTCTACCGTGAAGGCTTTTTCGCCAAATTGA", - "dna_sequence_length": 750, - "functions": [ - "phosphopantetheinyl transferase superfamily protein" - ], - "id": "CDS_3661", - "location": [ - [ - "NC_000913", - 3893881, - "+", - 750 - ] - ], - "md5": "f40b66b7934626e94972cab13a5d195a", - "parent_gene": "", - "protein_md5": "771aad9222bb4ada72854819b4f785b9", - "protein_translation": "MATHFARGILTEGHLISVRLPSQCHQEARNIPPHRQSRFLASRGLLAELMFMLYGIGELPEIVTLPKGKPVFSDKNLPSFSISYAGNMVGVALTTEGECGLDMELQRATRGFHSPHAPDNHTFSSNESLWISKQNDPNEARAQLITLRRSVLKLTGDVLNDDPRDLQLLPIAGRLKCAHVNHVEALCDAEDVLVWSVAVTPTIEKLSVWELDGKHGWKSLPDIHSRANNPTSRMMRFAQLSTVKAFSPN", - "protein_translation_length": 249, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGE6" - ], - [ - "gene_synonym", - "GeneID:948225" - ], - [ - "gene_synonym", - "chrR" - ], - [ - "gene_synonym", - "NP_418169.1" - ], - [ - "gene_synonym", - "yieF" - ], - [ - "gene_synonym", - "b3713" - ], - [ - "gene_synonym", - "JW3691" - ], - [ - "gene_synonym", - "ECK3706" - ], - [ - "gene_synonym", - "EcoGene:EG11723" - ], - [ - "gene_synonym", - "ASAP:ABE-0012146" - ], - [ - "gene_synonym", - "GI:16131581" - ] - ], - "dna_sequence": "ATGTCTGAAAAATTGCAGGTGGTTACGTTACTGGGGAGCCTGCGCAAAGGCTCATTTAATGGCATGGTTGCACGTACCCTGCCGAAAATTGCTCCGGCGAGCATGGAAGTCAATGCGTTACCATCCATTGCCGACATTCCCTTGTATGACGCTGACGTACAGCAGGAAGAAGGTTTTCCAGCAACGGTTGAAGCTCTGGCGGAACAGATCCGTCAGGCTGACGGTGTGGTGATCGTCACGCCGGAATATAACTACTCGGTACCGGGTGGGCTGAAAAATGCCATCGACTGGCTTTCCCGCCTGCCGGATCAACCGCTGGCCGGTAAACCGGTATTGATTCAGACCAGCTCAATGGGCGTGATTGGCGGCGCGCGCTGTCAGTATCACCTGCGCCAGATTCTGGTTTTCCTCGATGCAATGGTGATGAACAAGCCGGAATTTATGGGCGGCGTGATTCAGAACAAAGTTGATCCGCAAACCGGAGAAGTGATTGATCAGGGTACGCTGGACCACCTGACCGGGCAATTGACCGCATTTGGTGAGTTTATTCAGCGAGTTAAGATCTAA", - "dna_sequence_length": 567, - "functions": [ - "chromate reductase, Class I, flavoprotein" - ], - "id": "CDS_3662", - "location": [ - [ - "NC_000913", - 3894652, - "+", - 567 - ] - ], - "md5": "971e1134aa4110f621ddfac3023096d7", - "parent_gene": "", - "protein_md5": "ff9ecfec7cdf5b165f58df1393f56211", - "protein_translation": "MSEKLQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQTGEVIDQGTLDHLTGQLTAFGEFIQRVKI", - "protein_translation_length": 188, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948224" - ], - [ - "gene_synonym", - "purP" - ], - [ - "gene_synonym", - "adeP" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31466" - ], - [ - "gene_synonym", - "b3714" - ], - [ - "gene_synonym", - "JW3692" - ], - [ - "gene_synonym", - "NP_418170.1" - ], - [ - "gene_synonym", - "EcoGene:EG11724" - ], - [ - "gene_synonym", - "ECK3707" - ], - [ - "gene_synonym", - "GI:16131582" - ], - [ - "gene_synonym", - "ASAP:ABE-0012148" - ], - [ - "gene_synonym", - "yieG" - ] - ], - "dna_sequence": "ATGAGTCATCAACATACCACCCAGACTTCTGGTCAGGGGATGCTGGAACGCGTGTTTAAACTGCGCGAACATGGCACGACGGCACGGACCGAAGTGATCGCCGGTTTTACCACCTTCCTGACGATGGTTTACATCGTTTTTGTTAACCCGCAAATTCTTGGCGTTGCTGGCATGGATACCAGCGCCGTCTTCGTCACTACCTGTCTGATCGCTGCATTCGGCAGTATTATGATGGGACTGTTTGCTAACCTGCCAGTTGCACTGGCACCCGCTATGGGCCTGAATGCGTTCTTCGCTTTTGTCGTTGTACAGGCGATGGGCTTGCCGTGGCAGGTCGGGATGGGCGCAATCTTCTGGGGCGCGATAGGTCTGCTGTTACTGACGATTTTCCGCGTTCGCTACTGGATGATAGCCAACATTCCGGTGAGTCTGCGTGTGGGTATTACCAGCGGTATCGGTCTGTTCATTGGCATGATGGGGCTGAAAAACGCAGGTGTGATTGTCGCTAACCCGGAAACGCTGGTGAGCATCGGTAATCTGACTTCTCACAGCGTACTTCTGGGTATCCTCGGCTTCTTCATCATTGCTATTCTGGCCTCGCGCAACATTCACGCAGCGGTGCTGGTTTCTATCGTGGTGACGACGCTGCTGGGCTGGATGCTGGGTGATGTGCACTACAATGGCATCGTTTCTGCGCCGCCGAGCGTAATGACAGTTGTGGGTCATGTAGATTTAGCCGGGTCGTTTAACCTCGGGCTGGCAGGGGTGATTTTCTCTTTCATGTTGGTCAACTTGTTTGACTCCTCCGGTACGCTGATTGGCGTGACCGATAAAGCAGGTCTGGCGGATGAGAAGGGGAAATTCCCGCGCATGAAGCAGGCGCTGTATGTCGACAGTATCTCTTCCGTGACCGGTTCGTTTATCGGTACTTCTTCCGTTACGGCTTATATTGAGTCCTCTTCCGGCGTATCGGTTGGCGGTCGTACCGGTCTGACGGCAGTGGTTGTTGGTCTGCTGTTCCTGCTGGTTATCTTTCTGTCGCCGCTGGCGGGGATGGTGCCAGGCTACGCTGCAGCTGGTGCGCTGATTTACGTTGGCGTGCTGATGACTTCCAGTCTGGCACGCGTGAACTGGCAGGATCTTACTGAATCTGTTCCGGCGTTTATTACCGCCGTGATGATGCCGTTCAGCTTCTCGATTACCGAAGGTATCGCGCTGGGCTTTATCTCCTACTGCGTGATGAAAATCGGTACCGGACGTCTGCGTGATCTAAGCCCGTGCGTAATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTCTTTATCGACGCTCACTAA", 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"GeneID:948232" - ], - [ - "gene_synonym", - "b3715" - ], - [ - "gene_synonym", - "JW3693" - ], - [ - "gene_synonym", - "EcoGene:EG11725" - ], - [ - "gene_synonym", - "ASAP:ABE-0012153" - ], - [ - "gene_synonym", - "GI:16131583" - ], - [ - "gene_synonym", - "ECK3708" - ], - [ - "gene_synonym", - "NP_418171.1" - ] - ], - "dna_sequence": "ATGTCCCGGATAGAAGCGGTATTTTTCGACTGCGACGGTACGCTGGTCGACAGTGAAGTCATTTGCTCTCGCGCATATGTAACGATGTTTCAGGAATTTGGTATTACGCTCGATCCTGAAGAGGTATTCAAACGTTTCAAAGGTGTAAAACTGTACGAAATTATCGATATTGTTTCCCTTGAACATGGTGTTACGTTAGCGAAAACAGAAGCTGAACACGTTTACCGTGCAGAAGTCGCTCGGCTGTTCGATTCAGAACTGGAAGCCATCGAAGGGGCTGGAGCGCTCCTGTCAGCGATCACTGCGCCAATGTGTGTGGTATCTAACGGCCCAAATAACAAAATGCAGCATTCTATGGGCAAGCTGAATATGTTGCACTACTTCCCGGATAAACTGTTCAGCGGCTACGATATTCAGCGCTGGAAGCCAGACCCGGCGTTAATGTTCCATGCGGCAAAAGCGATGAATGTAAATGTAGAAAACTGCATTCTGGTTGATGACTCAGTTGCCGGTGCACAATCTGGTATCGACGCAGGTATGGAAGTGTTCTACTTCTGCGCCGACCCGCACAATAAGCCGATCGTTCACCCGAAAGTCACCACCTTTACCCATCTTTCGCAGTTACCTGAACTGTGGAAAGCGCGTGGTTGGGATATTACGGCATAG", - "dna_sequence_length": 666, - "functions": [ - "phosphoenolpyruvate and 6-phosphogluconate phosphatase" - ], - "id": "CDS_3664", - "location": [ - [ - "NC_000913", - 3896774, - "+", - 666 - ] - ], - "md5": "600d1d5776c87dd39ed11e6c2c7532b2", - "parent_gene": "", - "protein_md5": "3dcaef98017591f28c391689829fd5da", - "protein_translation": "MSRIEAVFFDCDGTLVDSEVICSRAYVTMFQEFGITLDPEEVFKRFKGVKLYEIIDIVSLEHGVTLAKTEAEHVYRAEVARLFDSELEAIEGAGALLSAITAPMCVVSNGPNNKMQHSMGKLNMLHYFPDKLFSGYDIQRWKPDPALMFHAAKAMNVNVENCILVDDSVAGAQSGIDAGMEVFYFCADPHNKPIVHPKVTTFTHLSQLPELWKARGWDITA", - "protein_translation_length": 221, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418172.1" - ], - [ - "gene_synonym", - "yieI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31468" - ], - [ - "gene_synonym", - "b3716" - ], - [ - "gene_synonym", - "GeneID:948231" - ], - [ - "gene_synonym", - "JW3694" - ], - [ - "gene_synonym", - "EcoGene:EG11726" - ], - [ - "gene_synonym", - "ASAP:ABE-0012156" - ], - [ - "gene_synonym", - "ECK3709" - ], - [ - "gene_synonym", - "GI:16131584" - ], - [ - "gene_synonym", - "cbrB" - ] - ], - "dna_sequence": "ATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCAGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGTCCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTGGGTGATAATACATCCAATTTTTCTCTTATTGTCGATAACTACGGGAGCTATTCCTGCGTTGTTAACCGGTGTAATGGTTGCCTGTCTGCCGGAAAAGATCGGGTCACAGAAACGTTATCGTTGTCTGGCTGGTGGCATAGGTGGCGTCGTTATCACCGAGATCTATTGTGCAGTTATTGTACATATTAAGGGCATGGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCATCATTCCTGCATTGCTGGCAGGTGTGGTGATGAGCAGAATCATTACCCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCTTTAAGTTAA", - "dna_sequence_length": 468, - "functions": [ - "PRK09823 family inner membrane protein, creBC regulon" - ], - "id": "CDS_3665", - "location": [ - [ - "NC_000913", - 3897506, - "+", - 468 - ] - ], - "md5": "41f08573e3ac98915beac5694f90f38d", - "parent_gene": "", - "protein_md5": "cc4c025526dd4ed554c2fe772486b49e", - "protein_translation": "MSVSRRVIHHGLYFAVLGPLIGVLFLVLYIFFAKEPLVLWVIIHPIFLLLSITTGAIPALLTGVMVACLPEKIGSQKRYRCLAGGIGGVVITEIYCAVIVHIKGMASSELFENILSGDSLVVRIIPALLAGVVMSRIITRLPGLDISCPETDSLS", - "protein_translation_length": 155, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31469" - ], - [ - "gene_synonym", - "yieJ" - ], - [ - "gene_synonym", - "b3717" - ], - [ - "gene_synonym", - "JW3695" - ], - [ - "gene_synonym", - "GeneID:948230" - ], - [ - "gene_synonym", - "NP_418173.1" - ], - [ - "gene_synonym", - "EcoGene:EG11727" - ], - [ - "gene_synonym", - "ECK3710" - ], - [ - "gene_synonym", - "ASAP:ABE-0012158" - ], - [ - "gene_synonym", - "cbrC" - ], - [ - "gene_synonym", - "GI:16131585" - ] - ], - "dna_sequence": "ATGACTCAAAATATCAGGCCGTTACCCCAATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAACAGGATAAAACCGTAGAGTGCGATTGCTGTGAACAACAGACGTCAGTTTATTACTCGGGTCCCTTTTATTGCGTTGATGAAGTTGAACATCTCTGTCCGTGGTGTATTGCGGACGGTTCTGCTGCTGAAAAGTTTGCAGGTAGTTTTCAGGATGATGCCAGCATAGAAGGTGTTGAATTTGAGTATGATGAAGAGGACGAATTTGCCGGTATTAAGAACACATATCCTGATGAAATGCTGAAAGAGTTGGTTGAACGCACGCCAGGTTATCATGGATGGCAGCAGGAATTCTGGCTCGCGCATTGTGGCGATTTCTGTGTTTTTATCGGCTATGTGGGCTGGAATGATATAAAAGATCGCCTCGATGAATTTGCCAACCTTGAAGAAGATTGTGAGAATTTCGGTATTAGAAATTCTGATCTAGCTAAATGCCTGCAAAAGGGTGGTCATTGTCAGGGTTATCTCTTCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAG", - "dna_sequence_length": 588, - "functions": [ - "UPF0167 family protein" - ], - "id": "CDS_3666", - "location": [ - [ - "NC_000913", - 3898022, - "+", - 588 - ] - ], - "md5": "27e09732e49735c42a1d12075bacf8a1", - "parent_gene": "", - "protein_md5": "f27f9784c59d8e932ddce32a6ca24d98", - "protein_translation": "MTQNIRPLPQFKYHPKPLETGAFEQDKTVECDCCEQQTSVYYSGPFYCVDEVEHLCPWCIADGSAAEKFAGSFQDDASIEGVEFEYDEEDEFAGIKNTYPDEMLKELVERTPGYHGWQQEFWLAHCGDFCVFIGYVGWNDIKDRLDEFANLEEDCENFGIRNSDLAKCLQKGGHCQGYLFRCLHCGKLRLWGDFS", - "protein_translation_length": 195, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yieK" - ], - [ - "gene_synonym", - "b3718" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31470" - ], - [ - "gene_synonym", - "YP_026242.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012160" - ], - [ - "gene_synonym", - "GeneID:948229" - ], - [ - "gene_synonym", - "GI:49176397" - ], - [ - "gene_synonym", - "ECK3711" - ], - [ - "gene_synonym", - "JW5613" - ], - [ - "gene_synonym", - "EcoGene:EG11728" - ] - ], - "dna_sequence": "ATGAAATTAATCATTACCGAAGATTACCAGGAAATGAGCCGTGTCGCGGCACACCATCTGCTTGGTTATATGTCGAAGACGCGTCGTGTTAACCTGGCAATTACCGCCGGTAGCACGCCCAAAGGCATGTATGAATACCTCACCACCCTGGTTAAAGGTAAGCCCTGGTACGATAACTGCTATTTCTATAATTTTGATGAAATTCCATTTCGCGGCAAAGAGGGAGAAGGCGTAACGATTACCAATCTGCGTAATCTGTTTTTCACCCCTGCGGGGATCAAAGAAGAGAATATCCAGAAGCTCACTATTGATAACTACCGCGAGCATGATCAGAAACTGGCGCGTGAAGGCGGACTGGATTTGGTGGTGCTGGGATTAGGTGCAGATGGTCATTTTTGTGGCAATTTGCCGAATACGACCCATTTCCATGAGCAAACCGTGGAGTTCCCGATCCAGGGAGAGATGGTTGATATTGTGGCGCATGGCGAGTTGGGCGGCGACTTTTCGTTAGTGCCTGACAGCTACGTGACGATGGGGCCGAAAAGCATCATGGCGGCGAAAAACTTGCTGATAATTGTCAGCGGCGCGGGTAAAGCGCAGGCACTGAAAAATGTTCTGCAAGGTCCGGTTACCGAAGATGTTCCAGCTTCCGTGTTGCAGCTGCATCCTTCGCTGATGGTAATCGCTGATAAAGCCGCTGCCGCAGAATTAGCACTCGGTTAA", - "dna_sequence_length": 723, - "functions": [ - "putative 6-phosphogluconolactonase" - ], - "id": "CDS_3667", - "location": [ - [ - "NC_000913", - 3899393, - "-", - 723 - ] - ], - "md5": "52d8c17bb6cf171498ccc529433f2da3", - "parent_gene": "", - "protein_md5": "cf25bdeb432fb5432f7962022fb5d0ab", - "protein_translation": "MKLIITEDYQEMSRVAAHHLLGYMSKTRRVNLAITAGSTPKGMYEYLTTLVKGKPWYDNCYFYNFDEIPFRGKEGEGVTITNLRNLFFTPAGIKEENIQKLTIDNYREHDQKLAREGGLDLVVLGLGADGHFCGNLPNTTHFHEQTVEFPIQGEMVDIVAHGELGGDFSLVPDSYVTMGPKSIMAAKNLLIIVSGAGKAQALKNVLQGPVTEDVPASVLQLHPSLMVIADKAAAAELALG", - "protein_translation_length": 240, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yieL" - ], - [ - "gene_synonym", - "NP_418175.3" - ], - [ - "gene_synonym", - "b3719" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31471" - ], - [ - "gene_synonym", - "ASAP:ABE-0012163" - ], - [ - "gene_synonym", - "GI:145698330" - ], - [ - "gene_synonym", - "ECK3712" - ], - [ - "gene_synonym", - "JW5612" - ], - [ - "gene_synonym", - "GeneID:948272" - ], - [ - "gene_synonym", - "EcoGene:EG11729" - ] - ], - "dna_sequence": "ATGAATATAAAAATTGCTGCTTTAACGCTGGCTATTGCCAGCGGTATTTCTGCTCAGTGGGCCATAGCAGCGGATATGCCAGCCAGCCCGGCACCCACTATCCCGGTGAAACAGTATGTGACTCAGGTCAATGCCGATAACAGCGTGACCTTTCGCTACTTTGCCCCTGGGGCAAAAAATGTCTCTGTAGTGGTGGGTGTTCCGGTTCCGGACAATATTCACCCGATGACCAAAGACGAAGCAGGAGTCTGGTCGTGGCGCACACCTATCCTGAAAGGCAACCTGTACGAGTATTTTTTCAATGTTGATGGTGTACGCAGCATTGATACAGGCACCGCAATGACTAATCCTCAGCGCCAGGTTAACTCCAGTATGATTCTGGTGCCAGGCAGTTATCTGGATACGCGTTCTGTTGCGCATGGTGATTTGATCGCCATAACTTACCACTCCAACGCATTGCAATCTGAACGTCAGATGTATGTCTGGACCCCGCCAGGATACACCGGCATGGGCGAGCCTTTGCCAGTGCTCTATTTCTATCACGGCTTTGGTGATACCGGACGTTCCGCTATCGATCAGGGGCGTATCCCGCAAATCATGGATAACCTGCTTGCTGAAGGGAAAATTAAACCGATGCTGGTGGTGATCCCGGATACAGAAACCGATGCGAAGGGCATTATTCCCGAAGATTTCGTGCCTCAGGAAAGACGTAAAGTCTTTTATCCGCTGAATGCTAAAGCGGCAGATCGCGAACTGATGAACGATATTATCCCGCTGATTAGCAAGCGTTTTAATGTCCGTAAAGATGCCGATGGCCGCGCGCTGGCAGGGCTTTCACAAGGCGGGTACCAGGCGCTGGTTTCCGGAATGAATCATCTGGAAAGCTTTGGCTGGCTGGCCACATTCAGTGGTGTTACCACGACAACCGTACCGGATGAAGGTGTCGCGGCCCGACTGAACGATCCGGCAGCTATCAACCAGCAACTACGTAATTTTACTGTGGTTGTGGGGGATAAAGATGTCGTAACCGGCAAGGATATCGCCGGGCTGAAAACTGAGCTTGAGCAGAAAAAAATTAACTTTGATTACCAGGAATATCCGGGTCTGAACCATGAAATGGATGTCTGGCGACCAGCCTATGCAGCCTTTGTACAGAAATTATTTAAATAA", - "dna_sequence_length": 1170, - "functions": [ - "putative xylanase" - ], - "id": "CDS_3668", - "location": [ - [ - "NC_000913", - 3900577, - "-", - 1170 - ] - ], - "md5": "572be87aaa1ef083dd73e240730834fb", - "parent_gene": "", - "protein_md5": "03f81822d1d4e3cfca9e61928503c5fc", - "protein_translation": "MNIKIAALTLAIASGISAQWAIAADMPASPAPTIPVKQYVTQVNADNSVTFRYFAPGAKNVSVVVGVPVPDNIHPMTKDEAGVWSWRTPILKGNLYEYFFNVDGVRSIDTGTAMTNPQRQVNSSMILVPGSYLDTRSVAHGDLIAITYHSNALQSERQMYVWTPPGYTGMGEPLPVLYFYHGFGDTGRSAIDQGRIPQIMDNLLAEGKIKPMLVVIPDTETDAKGIIPEDFVPQERRKVFYPLNAKAADRELMNDIIPLISKRFNVRKDADGRALAGLSQGGYQALVSGMNHLESFGWLATFSGVTTTTVPDEGVAARLNDPAAINQQLRNFTVVVGDKDVVTGKDIAGLKTELEQKKINFDYQEYPGLNHEMDVWRPAYAAFVQKLFK", - "protein_translation_length": 389, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "bglH" - ], - [ - "gene_synonym", - "JW3698" - ], - [ - "gene_synonym", - "ASAP:ABE-0012165" - ], - [ - "gene_synonym", - "b3720" - ], - [ - "gene_synonym", - "GeneID:948228" - ], - [ - "gene_synonym", - "NP_418176.1" - ], - [ - "gene_synonym", - "GI:16131588" - ], - [ - "gene_synonym", - "yieC" - ], - [ - "gene_synonym", - "ECK3713" - ], - [ - "gene_synonym", - "EcoGene:EG11364" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P26218" - ] - ], - "dna_sequence": "ATGTTTAGACGAAATCTTATTACCTCTGCCATCTTATTAATGGCACCGTTAGCCTTTTCTGCACAATCATTGGCTGAATCATTAACGGTGGAACAACGCCTTGAGTTATTAGAAAAGGCGTTAAGAGAAACGCAAAGCGAACTCAAAAAGTATAAAGATGAAGAGAAGAAAAAGTATACGCCAGCGACGGTGAATCGTAGCGTAAGTACGAATGATCAAGGGTATGCCGCCAATCCGTTCCCGACCAGTAGTGCCGCAAAACCTGATGCTGTACTGGTCAAAAATGAAGAGAAAAATGCCAGTGAGACAGGCTCGATTTATTCTTCCATGACTCTGAAAGATTTCAGTAAATTTGTGAAAGATGAAATTGGCTTTAGTTACAACGGCTATTACCGTTCTGGTTGGGGGACCGCCTCTCATGGTTCACCTAAATCATGGGCGATTGGTTCTCTGGGCCGCTTTGGTAACGAATACTCCGGCTGGTTTGATTTGCAGTTAAAACAACGTGTCTACAACGAAAACGGCAAACGGGTTGATGCCGTTGTGATGATGGATGGTAACGTTGGTCAGCAGTACTCTACCGGCTGGTTTGGCGATAACGCCGGTGGCGAGAACTATATGCAGTTCTCCGATATGTACGTTACCACCAAAGGTTTCCTGCCCTTTGCGCCAGAGGCTGATTTCTGGGTGGGTAAACACGGTGCGCCGAAAATTGAAATCCAGATGCTTGACTGGAAAACGCAGCGTACTGATGCCGCAGCGGGTGTAGGTCTGGAAAACTGGAAAGTCGGTCCGGGTAAAATTGATATCGCGCTGGTTCGCGAAGATGTCGATGATTACGATCGCAGCCTGCAAAACAAACAGCAGATTAATACCAATACCATTGATTTACGCTATAAAGATATCCCGTTATGGGATAAAGCCACCTTAATGGTAAGTGGTCGTTATGTCACGGCAAACGAAAGCGCATCGGAAAAAGATAATCAGGATAATAACGGGTATTATGACTGGAAAGATACCTGGATGTTTGGCACATCTTTAACGCAGAAATTTGATAAAGGTGGCTTCAACGAATTCTCCTTCCTGGTCGCGAATAACTCTATCGCCAGTAACTTTGGCCGTTATGCTGGCGCAAGTCCATTTACCACCTTTAATGGTCGTTATTATGGTGATCACACCGGCGGAACAGCGGTACGTCTGACTTCGCAGGGCGAAGCCTATATTGGCGATCATTTCATTGTAGCTAACGCGATTGTTTACTCCTTCGGTAACGATATATATAGCTACGAAACAGGCGCCCACTCTGATTTCGAATCTATTCGTGCGGTTGTTCGCCCGGCCTATATTTGGGACCAATATAACCAGACAGGTGTTGAACTGGGCTATTTCACCCAGCAAAACAAAGATGCGAATAGTAATAAATTTAATGAGTCTGGTTATAAAACCACGCTCTTCCATACCTTTAAAGTCAATACCAGTATGTTGACCTCGCGTCCGGAAATTCGTTTCTACGCCACGTATATCAAAGCCCTGGAAAACGAACTGGATGGCTTCACCTTTGAAGACAATAAAGACGACCAGTTTGCTGTCGGTGCCCAGGCTGAAATCTGGTGGTAA", - "dna_sequence_length": 1617, - "functions": [ - "carbohydrate-specific outer membrane porin, cryptic" - ], - "id": "CDS_3669", - "location": [ - [ - "NC_000913", - 3902220, - "-", - 1617 - ] - ], - "md5": "33786e398d76d5f6cf3502bbe4105903", - "parent_gene": "", - "protein_md5": "78e2581f6f02bddf54990bcb1e1e7f66", - "protein_translation": "MFRRNLITSAILLMAPLAFSAQSLAESLTVEQRLELLEKALRETQSELKKYKDEEKKKYTPATVNRSVSTNDQGYAANPFPTSSAAKPDAVLVKNEEKNASETGSIYSSMTLKDFSKFVKDEIGFSYNGYYRSGWGTASHGSPKSWAIGSLGRFGNEYSGWFDLQLKQRVYNENGKRVDAVVMMDGNVGQQYSTGWFGDNAGGENYMQFSDMYVTTKGFLPFAPEADFWVGKHGAPKIEIQMLDWKTQRTDAAAGVGLENWKVGPGKIDIALVREDVDDYDRSLQNKQQINTNTIDLRYKDIPLWDKATLMVSGRYVTANESASEKDNQDNNGYYDWKDTWMFGTSLTQKFDKGGFNEFSFLVANNSIASNFGRYAGASPFTTFNGRYYGDHTGGTAVRLTSQGEAYIGDHFIVANAIVYSFGNDIYSYETGAHSDFESIRAVVRPAYIWDQYNQTGVELGYFTQQNKDANSNKFNESGYKTTLFHTFKVNTSMLTSRPEIRFYATYIKALENELDGFTFEDNKDDQFAVGAQAEIWW", - "protein_translation_length": 538, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418177.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012169" - ], - [ - "gene_synonym", - "JW3699" - ], - [ - "gene_synonym", - "b3721" - ], - [ - "gene_synonym", - "bglB" - ], - [ - "gene_synonym", - "GeneID:948234" - ], - [ - "gene_synonym", - "ECK3714" - ], - [ - "gene_synonym", - "GI:16131589" - ], - [ - "gene_synonym", - "EcoGene:EG10114" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11988" - ] - ], - "dna_sequence": "ATGAAAGCATTTCCAGAAACATTTCTTTGGGGTGGCGCAACAGCTGCCAATCAGGTGGAAGGTGCCTGGCAGGAAGATGGCAAAGGGATCTCGACCTCAGATTTACAGCCTCATGGCGTAATGGGAAAAATGGAACCGCGCATCCTGGGGAAAGAGAATATCAAAGATGTCGCCATCGATTTTTATCACCGTTACCCGGAAGATATCGCGTTATTTGCCGAGATGGGCTTCACCTGTCTGCGTATTTCCATTGCCTGGGCGCGAATTTTCCCTCAGGGCGACGAAGTCGAACCGAATGAAGCGGGGTTAGCGTTTTACGATCGGCTGTTTGATGAAATGGCGCAGGCGGGGATCAAGCCGCTGGTAACGTTATCCCATTACGAAATGCCATATGGGCTGGTGAAAAACTACGGCGGTTGGGCTAATCGAGCGGTCATCGATCACTTCGAGCATTACGCCCGCACGGTCTTTACTCGCTACCAACATAAAGTGGCGTTATGGCTGACGTTTAATGAAATCAACATGTCGTTACACGCGCCATTCACGGGCGTGGGGCTGGCAGAAGAGAGTGGCGAGGCGGAAGTTTATCAGGCTATCCACCATCAACTGGTTGCCAGTGCGCGGGCAGTTAAAGCCTGTCATAGCCTGCTCCCCGAAGCGAAAATCGGCAATATGCTTCTCGGTGGGCTGGTTTACCCCCTCACCTGCCAGCCACAGGATATGTTGCAGGCCATGGAAGAGAACCGGCGCTGGATGTTCTTTGGTGATGTTCAGGCGCGTGGCCAGTATCCCGGCTATATGCAGCGTTTCTTCCGCGACCACAATATCACCATTGAGATGACTGAAAGTGACGCAGAAGATTTAAAACATACCGTCGATTTCATCTCTTTTAGTTATTACATGACTGGTTGTGTTTCCCACGACGAAAGCATTAATAAAAATGCGCAGGGCAACATACTGAATATGATCCCCAATCCGCATCTGAAAAGTTCAGAGTGGGGGTGGCAAATTGATCCGGTTGGATTACGGGTTCTGTTAAATACGCTTTGGGATCGTTATCAAAAACCGTTATTTATTGTCGAGAACGGATTAGGCGCAAAAGACAGCGTTGAAGCGGATGGTTCGATACAGGACGATTATCGAATTGCCTATTTAAACGATCACCTGGTACAGGTAAATGAAGCGATTGCCGATGGTGTGGATATTATGGGGTACACCAGTTGGGGGCCAATTGATTTAGTCAGTGCATCTCATTCACAAATGTCTAAGCGCTACGGCTTTATTTATGTGGATCGTGATGATAATGGCGAAGGAAGCCTCACAAGAACACGCAAGAAAAGCTTCGGATGGTATGCAGAGGTGATCAAGACGCGGGGGCTGTCATTAAAAAAAATAACCATTAAAGCACCTTAA", - "dna_sequence_length": 1413, - "functions": [ - "cryptic phospho-beta-glucosidase B" - ], - "id": "CDS_3670", - "location": [ - [ - "NC_000913", - 3903701, - "-", - 1413 - ] - ], - "md5": "04f74dda6dd43bcc16c2dbb681392aa8", - "parent_gene": "", - "protein_md5": "461baf9125b32f38e709a4fafa993169", - "protein_translation": "MKAFPETFLWGGATAANQVEGAWQEDGKGISTSDLQPHGVMGKMEPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCLRISIAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNYGGWANRAVIDHFEHYARTVFTRYQHKVALWLTFNEINMSLHAPFTGVGLAEESGEAEVYQAIHHQLVASARAVKACHSLLPEAKIGNMLLGGLVYPLTCQPQDMLQAMEENRRWMFFGDVQARGQYPGYMQRFFRDHNITIEMTESDAEDLKHTVDFISFSYYMTGCVSHDESINKNAQGNILNMIPNPHLKSSEWGWQIDPVGLRVLLNTLWDRYQKPLFIVENGLGAKDSVEADGSIQDDYRIAYLNDHLVQVNEAIADGVDIMGYTSWGPIDLVSASHSQMSKRYGFIYVDRDDNGEGSLTRTRKKSFGWYAEVIKTRGLSLKKITIKAP", - "protein_translation_length": 470, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3700" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08722" - ], - [ - "gene_synonym", - "GI:16131590" - ], - [ - "gene_synonym", - "b3722" - ], - [ - "gene_synonym", - "bglC" - ], - [ - "gene_synonym", - "GeneID:948236" - ], - [ - "gene_synonym", - "ASAP:ABE-0012171" - ], - [ - "gene_synonym", - "bglF" - ], - [ - "gene_synonym", - "ECK3715" - ], - [ - "gene_synonym", - "NP_418178.1" - ], - [ - "gene_synonym", - "bglS" - ], - [ - "gene_synonym", - "EcoGene:EG10115" - ] - ], - "dna_sequence": "ATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGAGTCTGATGCATTGCGCAACGCGATTACGTTTTAAATTAAAGGATGAAAGCAAAGCGCAAGCAGAGGTACTGAAAAAGACCCCCGGTATTATTATGGTGGTGGAAAGCGGTGGCCAGTTTCAGGTGGTCATAGGTAACCATGTGGCCGATGTCTTCCTGGCGGTTAACAGTGTGGCAGGCCTTGACGAAAAAGCGCAACAGGCACCGGAAAATGATGATAAAGGTAATCTGCTAAACCGCTTTGTTTATGTTATTTCAGGTATTTTTACGCCTCTGATCGGTTTGATGGCGGCAACCGGGATCTTGAAAGGTATGCTGGCTCTGGCGCTCACTTTTCAGTGGACGACCGAACAAAGTGGTACTTATTTAATTTTATTCAGCGCCAGTGATGCCTTGTTTTGGTTCTTCCCGATAATCCTGGGATACACCGCGGGGAAACGCTTCGGCGGTAATCCATTTACTGCCATGGTGATTGGTGGAGCGTTAGTGCATCCATTAATTCTGACTGCTTTCGAGAACGGGCAAAAAGCGGATGCGCTGGGGCTGGATTTCCTGGGTATTCCGGTCACATTGTTGAATTACTCGTCATCGGTTATTCCCATTATTTTTTCTGCCTGGTTGTGCAGCATTCTGGAACGCCGACTTAATGCGTGGTTACCGTCGGCAATCAAAAATTTCTTCACACCATTGCTATGTCTGATGGTTATCACACCCGTCACCTTTCTGCTGGTGGGGCCGCTATCAACCTGGATAAGCGAACTGATTGCCGCCGGTTATCTCTGGCTTTATCAGGCGGTTCCTGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGCCTGGTGCCGCTGTGTATCAATAACTTCACCGTGCTGGGCTACGACACCATGATCCCGCTGTTAATGCCCGCCATTATGGCGCAGGTCGGGGCGGCGCTCGGCGTCTTCCTCTGCGAACGCGATGCGCAGAAAAAAGTGGTGGCGGGATCAGCGGCGTTGACGAGTCTGTTTGGTATCACCGAACCAGCGGTATATGGCGTCAACCTGCCGCGTAAGTACCCCTTTGTTATCGCCTGTATCAGTGGGGCTTTGGGGGCCACCATTATTGGCTACGCGCAAACGAAAGTCTACTCCTTTGGTTTGCCAAGTATTTTCACCTTCATGCAAACCATCCCGTCAACGGGAATTGATTTCACCGTCTGGGCCAGCGTTATTGGCGGTGTCATTGCCATCGGTTGCGCATTTGTCGGTACGGTGATGCTTCATTTCATCACCGCTAAACGTCAGCCAGCGCAGGGTGCCCCGCAAGAGAAAACACCAGAGGTTATTACACCACCTGAGCAGGGCGGTATCTGTTCACCGATGACGGGAGAGATTGTGCCGCTCATTCACGTCGCTGATACCACGTTTGCCAGTGGCCTGTTGGGTAAAGGTATTGCCATTCTGCCCTCGGTTGGTGAAGTGCGTTCTCCGGTTGCGGGTCGAATTGCTTCGTTGTTCGCCACATTACACGCCATTGGCATTGAGTCAGATGATGGTGTGGAGATCCTGATTCATGTCGGTATCGACACCGTAAAACTGGACGGCAAATTCTTTTCCGCTCACGTCAACGTGGGTGACAAGGTCAATACAGGCGATCGGCTGATTTCTTTTGATATCCCTGCTATTCGCGAGGCCGGATTTGATCTGACGACGCCGGTATTAATCAGTAATAGCGATGATTTTACGGACGTATTACCCCACGGCACGGCGCAGATAAGCGCAGGTGAACCGCTGTTATCCATCATTCGCTAA", - "dna_sequence_length": 1878, - "functions": [ - "fused beta-glucoside-specific PTS enzymes: IIA component/IIB component/IIC component" - ], - "id": "CDS_3671", - "location": [ - [ - "NC_000913", - 3905597, - "-", - 1878 - ] - ], - "md5": "a3ec4127942af062367baebc6c1f75d9", - "parent_gene": "", - "protein_md5": "7bac339cb1d6460fd61e7f58ec0a9959", - "protein_translation": "MTELARKIVAGVGGADNIVSLMHCATRLRFKLKDESKAQAEVLKKTPGIIMVVESGGQFQVVIGNHVADVFLAVNSVAGLDEKAQQAPENDDKGNLLNRFVYVISGIFTPLIGLMAATGILKGMLALALTFQWTTEQSGTYLILFSASDALFWFFPIILGYTAGKRFGGNPFTAMVIGGALVHPLILTAFENGQKADALGLDFLGIPVTLLNYSSSVIPIIFSAWLCSILERRLNAWLPSAIKNFFTPLLCLMVITPVTFLLVGPLSTWISELIAAGYLWLYQAVPAFAGAVMGGFWQIFVMFGLHWGLVPLCINNFTVLGYDTMIPLLMPAIMAQVGAALGVFLCERDAQKKVVAGSAALTSLFGITEPAVYGVNLPRKYPFVIACISGALGATIIGYAQTKVYSFGLPSIFTFMQTIPSTGIDFTVWASVIGGVIAIGCAFVGTVMLHFITAKRQPAQGAPQEKTPEVITPPEQGGICSPMTGEIVPLIHVADTTFASGLLGKGIAILPSVGEVRSPVAGRIASLFATLHAIGIESDDGVEILIHVGIDTVKLDGKFFSAHVNVGDKVNTGDRLISFDIPAIREAGFDLTTPVLISNSDDFTDVLPHGTAQISAGEPLLSIIR", - "protein_translation_length": 625, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3701" - ], - [ - "gene_synonym", - "GI:16131591" - ], - [ - "gene_synonym", - "NP_418179.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11989" - ], - [ - "gene_synonym", - "b3723" - ], - [ - "gene_synonym", - "bglC" - ], - [ - "gene_synonym", - "ASAP:ABE-0012174" - ], - [ - "gene_synonym", - "bglG" - ], - [ - "gene_synonym", - "ECK3716" - ], - [ - "gene_synonym", - "GeneID:948235" - ], - [ - "gene_synonym", - "EcoGene:EG10116" - ], - [ - "gene_synonym", - "bglS" - ], - [ - "gene_synonym", - "bglR" - ] - ], - "dna_sequence": "ATGAACATGCAAATCACCAAAATTCTCAACAATAATGTTGTGGTGGTTATTGATGATCAACAGCGGGAAAAAGTCGTCATGGGGCGCGGAATTGGCTTTCAAAAACGCGCTGGCGAAAGAATTAACTCAAGTGGAATAGAAAAAGAGTATGCCTTGAGCAGTCATGAACTGAACGGGCGATTAAGCGAACTCTTAAGTCATATTCCTCTTGAGGTGATGGCAACCTGTGATCGTATTATCTCTTTAGCGCAGGAGCGCTTGGGAAAATTACAGGACAGTATTTATATCTCGCTAACTGACCATTGCCAGTTTGCGATTAAACGCTTTCAGCAAAACGTGTTGCTGCCCAACCCGTTGCTGTGGGATATCCAGCGGCTTTACCCGAAAGAGTTCCAGCTAGGGGAAGAAGCGTTAACCATTATTGATAAACGGTTGGGCGTGCAGTTACCGAAAGATGAAGTGGGCTTTATTGCCATGCATCTGGTCAGTGCCCAAATGAGCGGAAATATGGAGGATGTTGCAGGTGTCACGCAGTTAATGCGCGAAATGCTGCAATTAATAAAATTTCAGTTCAGCCTTAATTACCAGGAAGAAAGCTTGAGTTATCAGCGACTGGTTACACATCTGAAGTTTTTATCCTGGCGTATTCTTGAACATGCTTCAATTAACGATAGTGATGAATCATTACAACAAGCAGTAAAACAAAATTACCCGCAAGCATGGCAATGTGCGGAACGGATCGCCATTTTTATTGGTTTGCAGTATCAACGTAAAATTTCACCCGCAGAGATTATGTTTTTAGCCATAAATATAGAGCGCGTGCGCAAAGAACACTGA", - "dna_sequence_length": 837, - "functions": [ - "transcriptional antiterminator of the bgl operon" - ], - "id": "CDS_3672", - "location": [ - [ - "NC_000913", - 3906567, - "-", - 837 - ] - ], - "md5": "82ad703b98ef9da706a8ba16eb8cc472", - "parent_gene": "", - "protein_md5": "9cdb972cee1fdf6252a87c2d7e7c3719", - "protein_translation": "MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEYALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTDHCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLPKDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESLSYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIFIGLQYQRKISPAEIMFLAINIERVRKEH", - "protein_translation_length": 278, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418180.1" - ], - [ - "gene_synonym", - "JW3702" - ], - [ - "gene_synonym", - "phoU" - ], - [ - "gene_synonym", - "phoT" - ], - [ - "gene_synonym", - "GI:16131592" - ], - [ - "gene_synonym", - "ASAP:ABE-0012177" - ], - [ - "gene_synonym", - "EcoGene:EG10735" - ], - [ - "gene_synonym", - "b3724" - ], - [ - "gene_synonym", - "GeneID:948233" - ], - [ - "gene_synonym", - "ECK3717" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9K7" - ] - ], - "dna_sequence": "ATGGACAGTCTCAATCTTAATAAACATATTTCCGGCCAGTTCAACGCCGAACTGGAAAGTATCCGCACGCAGGTGATGACCATGGGCGGCATGGTGGAGCAGCAGCTTTCTGATGCAATCACCGCGATGCATAACCAGGACAGCGATCTGGCGAAGCGCGTCATCGAAGGCGACAAGAACGTCAACATGATGGAAGTGGCGATCGATGAAGCCTGCGTGCGCATTATCGCCAAACGTCAGCCGACGGCGAGCGACCTGCGACTGGTTATGGTGATCAGTAAAACCATTGCCGAGCTGGAGCGTATTGGCGACGTGGCGGACAAAATCTGCCGTACTGCGCTGGAGAAATTCTCCCAGCAGCATCAGCCGTTGCTGGTAAGTCTGGAGTCGCTGGGCCGTCATACCATCCAGATGCTGCACGACGTGCTGGACGCGTTCGCGCGGATGGACATTGACGAAGCGGTACGTATTTATCGTGAAGATAAAAAAGTCGATCAGGAATACGAAGGTATTGTTCGTCAACTGATGACCTACATGATGGAAGATTCGCGTACCATTCCGAGCGTACTTACTGCGCTGTTCTGCGCGCGTTCTATCGAACGTATTGGCGACCGCTGCCAGAATATTTGTGAGTTTATCTTCTACTACGTGAAGGGGCAGGATTTCCGTCACGTCGGTGGCGATGAGCTGGATAAACTGCTGGCGGGGAAAGATAGCGACAAATAA", - "dna_sequence_length": 726, - "functions": [ - "negative regulator of PhoR/PhoB two-component regulator" - ], - "id": "CDS_3673", - "location": [ - [ - "NC_000913", - 3907578, - "-", - 726 - ] - ], - "md5": "ac529d2827835829e87a91009ffee3d6", - "parent_gene": "", - "protein_md5": "c985a3c3e3ec4449c6414e751233c51d", - "protein_translation": "MDSLNLNKHISGQFNAELESIRTQVMTMGGMVEQQLSDAITAMHNQDSDLAKRVIEGDKNVNMMEVAIDEACVRIIAKRQPTASDLRLVMVISKTIAELERIGDVADKICRTALEKFSQQHQPLLVSLESLGRHTIQMLHDVLDAFARMDIDEAVRIYREDKKVDQEYEGIVRQLMTYMMEDSRTIPSVLTALFCARSIERIGDRCQNICEFIFYYVKGQDFRHVGGDELDKLLAGKDSDK", - "protein_translation_length": 241, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3703" - ], - [ - "gene_synonym", - "NP_418181.1" - ], - [ - "gene_synonym", - "phoT" - ], - [ - "gene_synonym", - "GI:16131593" - ], - [ - "gene_synonym", - "EcoGene:EG10783" - ], - [ - "gene_synonym", - "GeneID:948240" - ], - [ - "gene_synonym", - "b3725" - ], - [ - "gene_synonym", - "pstB" - ], - [ - "gene_synonym", - "ASAP:ABE-0012179" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAH0" - ], - [ - "gene_synonym", - "ECK3718" - ] - ], - "dna_sequence": "ATGAGTATGGTTGAAACTGCCCCGAGTAAAATTCAGGTTCGTAATTTGAACTTCTACTACGGCAAATTCCATGCCCTGAAAAACATCAACCTGGATATCGCTAAAAACCAGGTAACGGCGTTTATCGGGCCGTCCGGCTGCGGTAAATCGACGCTGCTGCGTACCTTCAACAAAATGTTTGAACTGTACCCGGAGCAGCGTGCGGAAGGTGAAATTCTGCTTGATGGCGACAACATCCTGACCAACTCTCAGGATATCGCACTGCTGCGTGCGAAAGTGGGCATGGTGTTCCAGAAACCGACGCCGTTTCCGATGTCCATCTACGACAACATCGCTTTTGGCGTTCGTCTGTTTGAGAAGCTCTCCCGTGCCGACATGGACGAGCGCGTGCAGTGGGCATTGACCAAAGCCGCATTGTGGAACGAAACCAAAGATAAATTGCACCAGAGCGGTTACTCTCTCTCTGGTGGTCAGCAACAGCGTCTGTGTATTGCGCGTGGTATCGCCATTCGCCCGGAAGTGCTGCTGCTCGACGAACCGTGTTCGGCGCTCGACCCTATCTCTACCGGGCGTATTGAAGAGCTGATCACCGAACTGAAGCAGGATTACACCGTGGTGATCGTCACCCACAACATGCAGCAGGCTGCGCGTTGTTCCGACCACACGGCGTTTATGTACCTGGGCGAATTGATTGAGTTCAGCAACACGGACGATCTGTTCACCAAGCCAGCGAAGAAACAAACAGAAGACTACATCACCGGTCGTTACGGTTGA", - "dna_sequence_length": 774, - "functions": [ - "phosphate ABC transporter ATPase" - ], - "id": "CDS_3674", - "location": [ - [ - "NC_000913", - 3908366, - "-", - 774 - ] - ], - "md5": "ca5d49c6a80d6b8e21eb47f0c733f13e", - "parent_gene": "", - "protein_md5": "89f4e395d961f21495741ae5f17800b1", - "protein_translation": "MSMVETAPSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMFELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDHTAFMYLGELIEFSNTDDLFTKPAKKQTEDYITGRYG", - "protein_translation_length": 257, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131594" - ], - [ - "gene_synonym", - "GeneID:948239" - ], - [ - "gene_synonym", - "phoT" - ], - [ - "gene_synonym", - "b3726" - ], - [ - "gene_synonym", - "EcoGene:EG10782" - ], - [ - "gene_synonym", - "phoR2b" - ], - [ - "gene_synonym", - "pstA" - ], - [ - "gene_synonym", - "NP_418182.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07654" - ], - [ - "gene_synonym", - "ASAP:ABE-0012184" - ], - [ - "gene_synonym", - "ECK3719" - ], - [ - "gene_synonym", - "R2pho" - ], - [ - "gene_synonym", - "JW3704" - ] - ], - "dna_sequence": "ATGGCTATGGTTGAAATGCAAACCACTGCGGCGCTGGCTGAATCTCGCCGCAAAATGCAGGCGCGTCGCCGCCTCAAAAACCGTATTGCGCTGACGCTCTCGATGGCGACGATGGCCTTCGGCCTGTTCTGGCTGATCTGGATTTTAATGTCCACCATCACTCGCGGTATCGACGGTATGTCGCTGGCGCTGTTCACTGAAATGACGCCGCCGCCCAATACGGAAGGTGGTGGTCTGGCGAACGCTCTGGCGGGTAGCGGGCTGTTAATTTTGTGGGCCACGGTATTCGGTACGCCGCTGGGCATTATGGCGGGGATTTATCTGGCGGAATATGGTCGTAAATCCTGGCTGGCAGAAGTGATTCGCTTCATTAACGACATTCTGCTCTCTGCGCCGTCGATTGTGGTTGGTCTGTTTGTTTACACCATTGTGGTGGCGCAGATGGAGCACTTCTCCGGCTGGGCGGGCGTGATTGCCCTGGCGTTGTTGCAGGTGCCGATTGTTATCCGCACCACCGAGAACATGCTGAAACTGGTGCCGTACAGCCTGCGTGAAGCGGCTTATGCGCTGGGTACACCGAAGTGGAAGATGATCTCTGCGATTACGCTGAAAGCGTCGGTGTCCGGGATTATGACCGGTATCCTGCTGGCGATTGCCCGTATTGCTGGTGAAACCGCGCCGCTGCTGTTTACCGCGCTCTCCAACCAGTTCTGGAGCACGGACATGATGCAGCCGATCGCCAACCTGCCGGTGACGATCTTTAAGTTTGCGATGAGCCCGTTTGCGGAATGGCAGCAATTGGCCTGGGCCGGGGTATTGATCATTACCCTGTGCGTACTGCTGCTGAACATTCTGGCGCGCGTTGTTTTTGCGAAGAATAAACACGGTTGA", - "dna_sequence_length": 891, - "functions": [ - "phosphate ABC transporter permease" - ], - "id": "CDS_3675", - "location": [ - [ - "NC_000913", - 3909439, - "-", - 891 - ] - ], - "md5": "c215d0a8002359370cda0c07278a3f1c", - "parent_gene": "", - "protein_md5": "c7c808e23ee95b56cd60bc41c96f9abb", - "protein_translation": "MAMVEMQTTAALAESRRKMQARRRLKNRIALTLSMATMAFGLFWLIWILMSTITRGIDGMSLALFTEMTPPPNTEGGGLANALAGSGLLILWATVFGTPLGIMAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIALALLQVPIVIRTTENMLKLVPYSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAIARIAGETAPLLFTALSNQFWSTDMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIITLCVLLLNILARVVFAKNKHG", - "protein_translation_length": 296, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131595" - ], - [ - "gene_synonym", - "GeneID:948238" - ], - [ - "gene_synonym", - "JW3705" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGH8" - ], - [ - "gene_synonym", - "phoW" - ], - [ - "gene_synonym", - "ECK3720" - ], - [ - "gene_synonym", - "EcoGene:EG10784" - ], - [ - "gene_synonym", - "b3727" - ], - [ - "gene_synonym", - "pstC" - ], - [ - "gene_synonym", - "NP_418183.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012186" - ] - ], - "dna_sequence": "ATGGCTGCAACCAAGCCTGCTTTTAACCCACCGGGTAAAAAGGGCGACATAATTTTCAGCGTGCTGGTAAAACTGGCGGCGCTGATTGTGCTATTGATGTTGGGTGGCATTATTGTCTCTCTGATCATCTCCTCCTGGCCGAGCATTCAGAAATTTGGTCTGGCTTTCCTATGGACCAAAGAGTGGGATGCACCGAACGATATCTACGGGGCGCTGGTGCCGATCTACGGTACGTTGGTGACTTCGTTTATCGCGCTGCTGATCGCCGTCCCGGTGAGTTTCGGTATCGCCCTGTTCCTGACTGAGCTTGCGCCTGGCTGGCTGAAACGCCCGCTGGGTATCGCCATTGAGCTGCTGGCAGCCATTCCAAGTATCGTTTACGGCATGTGGGGCCTGTTTATCTTTGCGCCGCTGTTCGCCGTTTACTTTCAGGAGCCGGTCGGCAATATCATGTCGAATATCCCGATTGTTGGCGCGCTGTTCTCTGGCCCCGCATTTGGTATCGGTATCCTCGCGGCAGGCGTGATCCTCGCCATCATGATTATTCCGTACATTGCGGCGGTAATGCGTGATGTGTTCGAACAAACCCCGGTGATGATGAAAGAGTCGGCCTACGGTATTGGCTGCACCACCTGGGAAGTTATCTGGCGTATCGTTCTTCCGTTCACCAAAAATGGTGTTATCGGCGGCATCATGCTGGGGCTGGGCCGCGCGCTCGGTGAAACCATGGCGGTGACCTTTATCATCGGTAACACCTACCAGCTCGACAGCGCCTCGCTGTATATGCCGGGCAACAGTATCACCTCTGCGCTGGCGAACGAATTTGCGGAAGCGGAATCCGGTCTGCACGTTGCCGCACTGATGGAACTGGGCCTGATCCTGTTTGTGATTACCTTCATCGTCCTCGCCGCATCGAAGTTTATGATTATGCGCCTGGCTAAGAATGAGGGGGCACGCTAA", - "dna_sequence_length": 960, - "functions": [ - "phosphate ABC transporter permease" - ], - "id": "CDS_3676", - "location": [ - [ - "NC_000913", - 3910398, - "-", - 960 - ] - ], - "md5": "d8f74dd1256066f64460eef249c48337", - "parent_gene": "", - "protein_md5": "35bab65849b37f27d224829abaa874fa", - "protein_translation": "MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIISSWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGALFSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGIMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFIVLAASKFMIMRLAKNEGAR", - "protein_translation_length": 319, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "pstS" - ], - [ - "gene_synonym", - "ASAP:ABE-0012190" - ], - [ - "gene_synonym", - "phoS" - ], - [ - "gene_synonym", - "b3728" - ], - [ - "gene_synonym", - "NP_418184.1" - ], - [ - "gene_synonym", - "JW3706" - ], - [ - "gene_synonym", - "ECK3721" - ], - [ - "gene_synonym", - "nmpA" - ], - [ - "gene_synonym", - "GeneID:948237" - ], - [ - "gene_synonym", - "phoR2a" - ], - [ - "gene_synonym", - "GI:16131596" - ], - [ - "gene_synonym", - "EcoGene:EG10734" - ], - [ - "gene_synonym", - "R2pho" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG82" - ] - ], - "dna_sequence": "ATGAAAGTTATGCGTACCACCGTCGCAACTGTTGTCGCCGCGACCTTATCGATGAGTGCTTTCTCTGTGTTTGCAGAAGCAAGCCTGACAGGTGCAGGTGCAACCTTCCCTGCGCCGGTGTATGCCAAATGGGCTGACACTTACCAGAAAGAAACCGGTAATAAAGTTAACTACCAGGGTATCGGTTCTTCCGGTGGCGTAAAACAGATTATCGCTAATACCGTTGATTTTGGTGCCTCTGACGCGCCGCTGTCTGACGAAAAACTGGCTCAGGAAGGTCTGTTCCAGTTCCCGACCGTGATTGGCGGCGTGGTGCTGGCGGTTAACATTCCAGGGCTGAAGTCTGGCGAACTGGTGCTGGATGGTAAAACCCTCGGCGACATCTACCTGGGCAAAATCAAGAAGTGGGATGATGAAGCCATCGCCAAACTGAATCCGGGTCTGAAACTGCCTTCACAAAACATTGCTGTAGTACGCCGCGCAGATGGCTCCGGGACTTCCTTCGTCTTCACCAGCTACCTGGCGAAAGTGAACGAAGAGTGGAAAAACAACGTTGGTACTGGCTCTACCGTAAAATGGCCGATCGGTCTGGGCGGTAAAGGTAACGACGGTATCGCCGCGTTCGTTCAGCGTCTGCCGGGTGCAATTGGTTATGTTGAATATGCTTACGCGAAGCAGAACAACCTGGCGTACACCAAACTGATCTCCGCTGATGGTAAACCGGTTAGTCCGACCGAAGAAAACTTCGCTAATGCAGCAAAAGGTGCAGACTGGAGCAAAACCTTCGCTCAGGATCTGACCAACCAGAAAGGCGAAGATGCATGGCCTATTACCTCTACCACGTTCATTCTGATCCACAAAGATCAGAAGAAACCAGAACAAGGCACAGAAGTGCTGAAATTCTTCGACTGGGCGTACAAAACCGGGGCTAAACAGGCGAACGACCTGGATTACGCCAGCCTGCCGGATAGTGTAGTTGAACAGGTTCGCGCTGCGTGGAAGACCAATATTAAAGACAGTAGCGGTAAGCCGCTGTACTAA", 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"ECK3722" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17169" - ], - [ - "gene_synonym", - "GI:16131597" - ], - [ - "gene_synonym", - "NP_418185.1" - ], - [ - "gene_synonym", - "EcoGene:EG10382" - ] - ], - "dna_sequence": "ATGTGTGGAATTGTTGGCGCGATCGCGCAACGTGATGTAGCAGAAATCCTTCTTGAAGGTTTACGTCGTCTGGAATACCGCGGATATGACTCTGCCGGTCTGGCCGTTGTTGATGCAGAAGGTCATATGACCCGCCTGCGTCGCCTCGGTAAAGTCCAGATGCTGGCACAGGCAGCGGAAGAACATCCTCTGCATGGCGGCACTGGTATTGCTCACACTCGCTGGGCGACCCACGGTGAACCTTCAGAAGTGAATGCGCATCCGCATGTTTCTGAACACATTGTGGTGGTGCATAACGGCATCATCGAAAACCATGAACCGCTGCGTGAAGAGCTAAAAGCGCGTGGCTATACCTTCGTTTCTGAAACCGACACCGAAGTGATTGCCCATCTGGTGAACTGGGAGCTGAAACAAGGCGGGACTCTGCGTGAGGCCGTTCTGCGTGCTATCCCGCAGCTGCGTGGTGCGTACGGTACAGTGATCATGGACTCCCGTCACCCGGATACCCTGCTGGCGGCACGTTCTGGTAGTCCGCTGGTGATTGGCCTGGGGATGGGCGAAAACTTTATCGCTTCTGACCAGCTGGCGCTGTTGCCGGTGACCCGTCGCTTTATCTTCCTTGAAGAGGGCGATATTGCGGAAATCACTCGCCGTTCGGTAAACATCTTCGATAAAACTGGCGCGGAAGTAAAACGTCAGGATATCGAATCCAATCTGCAATATGACGCGGGCGATAAAGGCATTTACCGTCACTACATGCAGAAAGAGATCTACGAACAGCCGAACGCGATCAAAAACACCCTTACCGGACGCATCAGCCACGGTCAGGTTGATTTAAGCGAGCTGGGACCGAACGCCGACGAACTGCTGTCGAAGGTTGAGCATATTCAGATCCTCGCCTGTGGTACTTCTTATAACTCCGGTATGGTTTCCCGCTACTGGTTTGAATCGCTAGCAGGTATTCCGTGCGACGTCGAAATCGCCTCTGAATTCCGCTATCGCAAATCTGCCGTGCGTCGTAACAGCCTGATGATCACCTTGTCACAGTCTGGCGAAACCGCGGATACCCTGGCTGGCCTGCGTCTGTCGAAAGAGCTGGGTTACCTTGGTTCACTGGCAATCTGTAACGTTCCGGGTTCTTCTCTGGTGCGCGAATCCGATCTGGCGCTAATGACCAACGCGGGTACAGAAATCGGCGTGGCATCCACTAAAGCATTCACCACTCAGTTAACTGTGCTGTTGATGCTGGTGGCGAAGCTGTCTCGCCTGAAAGGTCTGGATGCCTCCATTGAACATGACATCGTGCATGGTCTGCAGGCGCTGCCGAGCCGTATTGAGCAGATGCTGTCTCAGGACAAACGCATTGAAGCGCTGGCAGAAGATTTCTCTGACAAACATCACGCGCTGTTCCTGGGCCGTGGCGATCAGTACCCAATCGCGCTGGAAGGCGCATTGAAGTTGAAAGAGATCTCTTACATTCACGCTGAAGCCTACGCTGCTGGCGAACTGAAACACGGTCCGCTGGCGCTAATTGATGCCGATATGCCGGTTATTGTTGTTGCACCGAACAACGAATTGCTGGAAAAACTGAAATCCAACATTGAAGAAGTTCGCGCGCGTGGCGGTCAGTTGTATGTCTTCGCCGATCAGGATGCGGGTTTTGTAAGTAGCGATAACATGCACATCATCGAGATGCCGCATGTGGAAGAGGTGATTGCACCGATCTTCTACACCGTTCCGCTGCAGCTGCTGGCTTACCATGTCGCGCTGATCAAAGGCACCGACGTTGACCAGCCGCGTAACCTGGCAAAATCGGTTACGGTTGAGTAA", 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"type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "glmU" - ], - [ - "gene_synonym", - "GeneID:948246" - ], - [ - "gene_synonym", - "JW3708" - ], - [ - "gene_synonym", - "ECK3723" - ], - [ - "gene_synonym", - "yieA" - ], - [ - "gene_synonym", - "GI:16131598" - ], - [ - "gene_synonym", - "tms" - ], - [ - "gene_synonym", - "b3730" - ], - [ - "gene_synonym", - "NP_418186.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACC7" - ], - [ - "gene_synonym", - "ASAP:ABE-0012201" - ], - [ - "gene_synonym", - "EcoGene:EG11198" - ] - ], - "dna_sequence": "ATGTTGAATAATGCTATGAGCGTAGTGATCCTTGCCGCAGGCAAAGGCACGCGCATGTATTCCGATCTTCCGAAAGTGCTGCATACCCTTGCCGGGAAAGCGATGGTTCAGCATGTCATTGATGCTGCGAATGAATTAGGCGCAGCGCACGTTCACCTGGTGTACGGTCACGGCGGCGATCTGCTAAAACAGGCGCTGAAAGACGACAACCTTAACTGGGTGCTTCAGGCAGAGCAGCTGGGTACGGGTCATGCAATGCAGCAGGCCGCACCTTTCTTTGCCGATGATGAAGACATTTTAATGCTCTACGGCGACGTGCCGCTGATCTCTGTCGAAACACTCCAGCGTCTGCGTGATGCTAAACCGCAGGGTGGCATTGGTCTGCTGACGGTGAAACTGGATGATCCGACCGGTTATGGACGTATCACCCGTGAAAACGGCAAAGTTACCGGCATTGTTGAGCACAAAGATGCCACCGACGAGCAGCGTCAGATTCAGGAGATCAACACCGGCATTCTGATTGCCAACGGCGCAGATATGAAACGCTGGCTGGCGAAGCTGACCAACAATAATGCTCAGGGCGAATACTACATCACCGACATTATTGCGCTGGCGTATCAGGAAGGGCGTGAAATCGTCGCCGTTCATCCGCAACGTTTAAGCGAAGTAGAAGGCGTGAATAACCGCCTGCAACTCTCCCGTCTGGAGCGTGTTTATCAGTCCGAACAGGCTGAAAAACTGCTGTTAGCAGGCGTTATGCTGCGCGATCCAGCGCGTTTTGATCTGCGTGGTACGCTAACTCACGGGCGCGATGTTGAAATTGATACTAACGTTATCATCGAGGGCAACGTGACTCTCGGTCATCGCGTGAAAATTGGCACCGGTTGCGTGATTAAAAACAGCGTGATTGGCGATGATTGCGAAATCAGTCCGTATACCGTTGTGGAAGATGCGAATCTGGCAGCGGCCTGTACCATTGGCCCGTTTGCCCGTTTGCGTCCTGGTGCTGAGTTGCTGGAAGGTGCTCACGTCGGTAACTTCGTTGAGATGAAAAAAGCGCGTCTGGGTAAAGGCTCGAAAGCTGGTCATCTGACTTACCTGGGCGATGCGGAAATTGGCGATAACGTTAACATCGGCGCGGGAACCATTACCTGCAACTACGATGGTGCGAATAAATTTAAGACCATTATCGGCGACGATGTGTTTGTTGGTTCCGACACTCAGCTGGTGGCCCCGGTAACAGTAGGCAAAGGCGCGACCATTGCTGCGGGTACAACTGTGACGCGTAATGTCGGCGAAAATGCATTAGCTATCAGCCGTGTGCCGCAGACTCAGAAAGAAGGCTGGCGTCGTCCGGTAAAGAAAAAGTGA", - "dna_sequence_length": 1371, - "functions": [ - "fused N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase" - ], - "id": "CDS_3679", - "location": [ - [ - "NC_000913", - 3915200, - "-", - 1371 - ] - ], - "md5": "7de2b91c0dd30cfb5ca6d07d498ccf6c", - "parent_gene": "", - "protein_md5": "17be33986353f1d5490ae097345f8a99", - "protein_translation": "MLNNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILMLYGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATDEQRQIQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISRVPQTQKEGWRRPVKKK", - "protein_translation_length": 456, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10100" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6E6" - ], - [ - "gene_synonym", - "GeneID:948245" - ], - [ - "gene_synonym", - "JW3709" - ], - [ - "gene_synonym", - "GI:16131599" - ], - [ - "gene_synonym", - "papG" - ], - [ - "gene_synonym", - "ECK3724" - ], - [ - "gene_synonym", - "b3731" - ], - [ - "gene_synonym", - "uncC" - ], - [ - "gene_synonym", - "atpC" - ], - [ - "gene_synonym", - "ASAP:ABE-0012206" - ], - [ - "gene_synonym", - "NP_418187.1" - ] - ], - "dna_sequence": "ATGGCAATGACTTACCACCTGGACGTCGTCAGCGCAGAGCAACAAATGTTCTCTGGTCTGGTCGAGAAAATCCAGGTAACGGGTAGCGAAGGTGAACTGGGGATCTACCCTGGCCACGCACCGCTGCTCACCGCCATTAAGCCTGGTATGATTCGCATCGTGAAACAGCACGGTCACGAAGAGTTTATCTATCTGTCTGGCGGCATTCTTGAAGTGCAGCCTGGCAACGTGACCGTTCTGGCCGACACCGCAATTCGCGGCCAGGATCTCGACGAAGCGCGAGCCATGGAAGCGAAACGTAAGGCTGAAGAGCACATTAGCAGCTCTCACGGCGACGTAGATTACGCTCAGGCGTCTGCGGAACTGGCCAAAGCGATCGCGCAGCTGCGCGTTATCGAGTTGACCAAAAAAGCGATGTAA", - "dna_sequence_length": 420, - "functions": [ - "F1 sector of membrane-bound ATP synthase, epsilon subunit" - ], - "id": "CDS_3680", - "location": [ - [ - "NC_000913", - 3915972, - "-", - 420 - ] - ], - "md5": "37b35cb47f95439f3b84be4f2349dd81", - "parent_gene": "", - "protein_md5": "9697dece7ffc23f6ca461bc452f22532", - "protein_translation": "MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFIYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELAKAIAQLRVIELTKKAM", - "protein_translation_length": 139, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10101" - ], - [ - "gene_synonym", - "JW3710" - ], - [ - "gene_synonym", - "GeneID:948244" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABB4" - ], - [ - "gene_synonym", - "GI:16131600" - ], - [ - "gene_synonym", - "ECK3725" - ], - [ - "gene_synonym", - "papB" - ], - [ - "gene_synonym", - "uncD" - ], - [ - "gene_synonym", - "ASAP:ABE-0012208" - ], - [ - "gene_synonym", - "b3732" - ], - [ - "gene_synonym", - "NP_418188.1" - ], - [ - "gene_synonym", - "atpD" - ] - ], - "dna_sequence": "ATGGCTACTGGAAAGATTGTCCAGGTAATCGGCGCCGTAGTTGACGTCGAATTCCCTCAGGATGCCGTACCGCGCGTGTACGATGCTCTTGAGGTGCAAAATGGTAATGAGCGTCTGGTGCTGGAAGTTCAGCAGCAGCTCGGCGGCGGTATCGTACGTACCATCGCAATGGGTTCCTCCGACGGTCTGCGTCGCGGTCTGGATGTAAAAGACCTCGAACACCCGATTGAAGTCCCGGTAGGTAAAGCGACTCTGGGCCGTATCATGAACGTACTGGGTGAACCGGTCGACATGAAAGGCGAGATCGGTGAAGAAGAGCGTTGGGCGATTCACCGCGCAGCACCTTCCTACGAAGAGCTGTCAAACTCTCAGGAACTGCTGGAAACCGGTATCAAAGTTATCGACCTGATGTGTCCGTTCGCTAAGGGCGGTAAAGTTGGTCTGTTCGGTGGTGCGGGTGTAGGTAAAACCGTAAACATGATGGAGCTCATTCGTAACATCGCGATCGAGCACTCCGGTTACTCTGTGTTTGCGGGCGTAGGTGAACGTACTCGTGAGGGTAACGACTTCTACCACGAAATGACCGACTCCAACGTTATCGACAAAGTATCCCTGGTGTATGGCCAGATGAACGAGCCGCCGGGAAACCGTCTGCGCGTTGCTCTGACCGGTCTGACCATGGCTGAGAAATTCCGTGACGAAGGTCGTGACGTTCTGCTGTTCGTTGACAACATCTATCGTTACACCCTGGCCGGTACGGAAGTATCCGCACTGCTGGGCCGTATGCCTTCAGCGGTAGGTTATCAGCCGACCCTGGCGGAAGAGATGGGCGTTCTGCAGGAACGTATCACCTCCACCAAAACTGGTTCTATCACCTCCGTACAGGCAGTATACGTACCTGCGGATGACTTGACTGACCCGTCTCCGGCAACCACCTTTGCGCACCTTGACGCAACCGTGGTACTGAGCCGTCAGATCGCGTCTCTGGGTATCTACCCGGCCGTTGACCCGCTGGACTCCACCAGCCGTCAGCTGGACCCGCTGGTGGTTGGTCAGGAACACTACGACACCGCGCGTGGCGTTCAGTCCATCCTGCAACGTTATCAGGAACTGAAAGACATCATCGCCATCCTGGGTATGGATGAACTGTCTGAAGAAGACAAACTGGTGGTAGCGCGTGCTCGTAAGATCCAGCGCTTCCTGTCCCAGCCGTTCTTCGTGGCAGAAGTATTCACCGGTTCTCCGGGTAAATACGTCTCCCTGAAAGACACCATCCGTGGCTTTAAAGGCATCATGGAAGGCGAATACGATCACCTGCCGGAGCAGGCGTTCTACATGGTCGGTTCCATCGAAGAAGCTGTGGAAAAAGCCAAAAAACTTTAA", - "dna_sequence_length": 1383, - "functions": [ - "F1 sector of membrane-bound ATP synthase, beta subunit" - ], - "id": "CDS_3681", - "location": [ - [ - "NC_000913", - 3917375, - "-", - 1383 - ] - ], - "md5": "b0bc0597988acde73cabbddde1d928d6", - "parent_gene": "", - "protein_md5": "87a0407f808f3b21b2ac263219666221", - "protein_translation": "MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQQQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEEDKLVVARARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGIMEGEYDHLPEQAFYMVGSIEEAVEKAKKL", - "protein_translation_length": 460, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948243" - ], - [ - "gene_synonym", - "JW3711" - ], - [ - "gene_synonym", - "EcoGene:EG10104" - ], - [ - "gene_synonym", - "GI:16131601" - ], - [ - "gene_synonym", - "NP_418189.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABA6" - ], - [ - "gene_synonym", - "papC" - ], - [ - "gene_synonym", - "uncG" - ], - [ - "gene_synonym", - "ECK3726" - ], - [ - "gene_synonym", - "b3733" - ], - [ - "gene_synonym", - "ASAP:ABE-0012211" - ], - [ - "gene_synonym", - "atpG" - ] - ], - "dna_sequence": "ATGGCCGGCGCAAAAGAGATACGTAGTAAGATCGCAAGCGTCCAGAACACGCAAAAGATCACTAAAGCGATGGAGATGGTCGCCGCTTCCAAAATGCGTAAATCGCAGGATCGCATGGCGGCCAGCCGTCCTTATGCAGAAACCATGCGCAAAGTGATTGGTCACCTTGCACACGGTAATCTGGAATATAAGCACCCTTACCTGGAAGACCGCGACGTTAAACGCGTGGGCTACCTGGTGGTGTCGACCGACCGTGGTTTGTGCGGTGGTTTGAACATTAACCTGTTCAAAAAACTGCTGGCGGAAATGAAGACCTGGACCGACAAAGGCGTTCAATGCGACCTCGCAATGATCGGCTCGAAAGGCGTGTCGTTCTTCAACTCCGTGGGCGGCAATGTTGTTGCCCAGGTCACCGGCATGGGGGATAACCCTTCCCTGTCCGAACTGATCGGTCCGGTAAAAGTGATGTTGCAGGCCTACGACGAAGGCCGTCTGGACAAGCTTTACATTGTCAGCAACAAATTTATTAACACCATGTCTCAGGTTCCGACCATCAGCCAGCTGCTGCCGTTACCGGCATCAGATGATGATGATCTGAAACATAAATCCTGGGATTACCTGTACGAACCCGATCCGAAGGCGTTGCTGGATACCCTGCTGCGTCGTTATGTCGAATCTCAGGTTTATCAGGGCGTGGTTGAAAACCTGGCCAGCGAGCAGGCCGCCCGTATGGTGGCGATGAAAGCCGCGACCGACAATGGCGGCAGCCTGATTAAAGAGCTGCAGTTGGTATACAACAAAGCTCGTCAGGCCAGCATTACTCAGGAACTCACCGAGATCGTCTCGGGGGCCGCCGCGGTTTAA", - "dna_sequence_length": 864, - "functions": [ - "F1 sector of membrane-bound ATP synthase, gamma subunit" - ], - "id": "CDS_3682", - "location": [ - [ - "NC_000913", - 3918265, - "-", - 864 - ] - ], - "md5": "58fb640a39bfaa6a88ba5ec470af7399", - "parent_gene": "", - "protein_md5": "d21bdcc2f9fc8b3e07ce5eaed473d7bb", - "protein_translation": "MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV", - "protein_translation_length": 287, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3712" - ], - [ - "gene_synonym", - "GeneID:948242" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABB0" - ], - [ - "gene_synonym", - "NP_418190.1" - ], - [ - "gene_synonym", - "GI:16131602" - ], - [ - "gene_synonym", - "papA" - ], - [ - "gene_synonym", - "ECK3727" - ], - [ - "gene_synonym", - "b3734" - ], - [ - "gene_synonym", - "uncA" - ], - [ - "gene_synonym", - "ASAP:ABE-0012213" - ], - [ - "gene_synonym", - "atpA" - ], - [ - "gene_synonym", - "EcoGene:EG10098" - ] - ], - "dna_sequence": "ATGCAACTGAATTCCACCGAAATCAGCGAACTGATCAAGCAGCGCATTGCTCAGTTCAATGTTGTGAGTGAAGCTCACAACGAAGGTACTATTGTTTCTGTAAGTGACGGTGTTATCCGCATTCACGGCCTGGCCGATTGTATGCAGGGTGAAATGATCTCCCTGCCGGGTAACCGTTACGCTATCGCACTGAACCTCGAGCGCGACTCTGTAGGTGCGGTTGTTATGGGTCCGTACGCTGACCTTGCCGAAGGCATGAAAGTTAAGTGTACTGGCCGTATCCTGGAAGTTCCGGTTGGCCGTGGCCTGCTGGGCCGTGTGGTTAACACTCTGGGTGCACCAATCGACGGTAAAGGTCCGCTGGATCACGACGGCTTCTCTGCTGTAGAAGCAATCGCTCCGGGCGTTATCGAACGTCAGTCCGTAGATCAGCCGGTACAGACCGGTTATAAAGCCGTTGACTCCATGATCCCAATCGGTCGTGGTCAGCGTGAATTGATCATCGGTGACCGTCAGACAGGTAAAACCGCACTGGCTATCGATGCCATCATCAACCAGCGCGATTCCGGTATCAAATGTATCTATGTCGCTATCGGCCAGAAAGCGTCCACCATTTCTAACGTGGTACGTAAACTGGAAGAGCACGGCGCACTGGCTAACACCATCGTTGTGGTAGCAACCGCGTCTGAATCCGCTGCACTGCAATACCTGGCACCGTATGCCGGTTGCGCAATGGGCGAATACTTCCGTGACCGCGGTGAAGATGCGCTGATCATTTACGATGACCTGTCTAAACAGGCTGTTGCTTACCGTCAGATCTCCCTGCTGCTCCGTCGTCCGCCAGGACGTGAAGCATTCCCGGGCGACGTTTTCTACCTCCACTCTCGTCTGCTGGAGCGTGCTGCACGTGTTAACGCCGAATACGTTGAAGCCTTCACCAAAGGTGAAGTGAAAGGGAAAACCGGTTCTCTGACCGCACTGCCGATTATCGAAACTCAGGCGGGTGACGTTTCTGCGTTCGTTCCGACCAACGTAATCTCCATTACCGATGGTCAGATCTTCCTGGAAACCAACCTGTTCAACGCCGGTATTCGTCCTGCGGTTAACCCGGGTATTTCCGTATCCCGTGTTGGTGGTGCAGCACAGACCAAGATCATGAAAAAACTGTCCGGTGGTATCCGTACCGCTCTGGCACAGTATCGTGAACTGGCAGCGTTCTCTCAGTTTGCATCCGACCTTGACGATGCAACACGTAAGCAGCTTGACCACGGTCAGAAAGTGACCGAACTGCTGAAACAGAAACAGTATGCGCCGATGTCCGTTGCGCAGCAGTCTCTGGTTCTGTTCGCAGCAGAACGTGGTTACCTGGCGGATGTTGAACTGTCGAAAATTGGCAGCTTCGAAGCCGCTCTGCTGGCTTACGTCGACCGTGATCACGCTCCGTTGATGCAAGAGATCAACCAGACCGGTGGCTACAACGACGAAATCGAAGGCAAGCTGAAAGGCATCCTCGATTCCTTCAAAGCAACCCAATCCTGGTAA", 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- "JW3713" - ], - [ - "gene_synonym", - "EcoGene:EG10105" - ], - [ - "gene_synonym", - "GeneID:948254" - ], - [ - "gene_synonym", - "papE" - ], - [ - "gene_synonym", - "GI:16131603" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABA4" - ], - [ - "gene_synonym", - "b3735" - ], - [ - "gene_synonym", - "atpH" - ], - [ - "gene_synonym", - "NP_418191.1" - ], - [ - "gene_synonym", - "uncH" - ], - [ - "gene_synonym", - "ASAP:ABE-0012215" - ] - ], - "dna_sequence": "ATGTCTGAATTTATTACGGTAGCTCGCCCCTACGCCAAAGCAGCTTTTGACTTTGCCGTCGAACACCAAAGTGTAGAACGCTGGCAGGACATGCTGGCGTTTGCCGCCGAGGTAACCAAAAACGAACAAATGGCAGAGCTTCTCTCTGGCGCGCTTGCGCCAGAAACGCTCGCCGAGTCGTTTATCGCAGTTTGTGGTGAGCAACTGGACGAAAACGGTCAGAACCTGATTCGGGTTATGGCTGAAAATGGTCGTCTTAACGCGCTCCCGGATGTTCTGGAGCAGTTTATTCACCTGCGTGCCGTGAGTGAGGCTACCGCTGAGGTAGACGTCATTTCCGCTGCCGCACTGAGTGAACAACAGCTCGCGAAAATTTCTGCTGCGATGGAAAAACGTCTGTCACGCAAAGTTAAGCTGAATTGCAAAATCGATAAGTCTGTAATGGCAGGCGTTATCATCCGAGCGGGTGATATGGTCATTGATGGCAGCGTACGCGGTCGTCTTGAGCGCCTTGCAGACGTCTTGCAGTCTTAA", - "dna_sequence_length": 534, - "functions": [ - "F1 sector of membrane-bound ATP synthase, delta subunit" - ], - "id": "CDS_3684", - "location": [ - [ - "NC_000913", - 3920403, - "-", - 534 - ] - ], - "md5": "ed057073143da5515dfc3dc57eb3556d", - "parent_gene": "", - "protein_md5": "9493d28b2334a35fbf3a5971f94c0d6b", - "protein_translation": "MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVIDGSVRGRLERLADVLQS", - "protein_translation_length": 177, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3729" - ], - [ - "gene_synonym", - "EcoGene:EG10103" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABA0" - ], - [ - "gene_synonym", - "GeneID:948247" - ], - [ - "gene_synonym", - "JW3714" - ], - [ - "gene_synonym", - "papF" - ], - [ - "gene_synonym", - "uncF" - ], - [ - "gene_synonym", - "GI:16131604" - ], - [ - "gene_synonym", - "b3736" - ], - [ - "gene_synonym", - "ASAP:ABE-0012217" - ], - [ - "gene_synonym", - "NP_418192.1" - ], - [ - "gene_synonym", - "atpF" - ] - ], - "dna_sequence": "GTGAATCTTAACGCAACAATCCTCGGCCAGGCCATCGCGTTTGTCCTGTTCGTTCTGTTCTGCATGAAGTACGTATGGCCGCCATTAATGGCAGCCATCGAAAAACGTCAAAAAGAAATTGCTGACGGCCTTGCTTCCGCAGAACGAGCACATAAGGACCTTGACCTTGCAAAGGCCAGCGCGACCGACCAGCTGAAAAAAGCGAAAGCGGAAGCCCAGGTAATCATCGAGCAGGCGAACAAACGCCGCTCGCAGATTCTGGACGAAGCGAAAGCTGAGGCAGAACAGGAACGTACTAAAATCGTGGCCCAGGCGCAGGCGGAAATTGAAGCCGAGCGTAAACGTGCCCGTGAAGAGCTGCGTAAGCAAGTTGCTATCCTGGCTGTTGCTGGCGCCGAGAAGATCATCGAACGTTCCGTGGATGAAGCTGCTAACAGCGACATCGTGGATAAACTTGTCGCTGAACTGTAA", - "dna_sequence_length": 471, - "functions": [ - "F0 sector of membrane-bound ATP synthase, subunit b" - ], - "id": "CDS_3685", - "location": [ - [ - "NC_000913", - 3920888, - "-", - 471 - ] - ], - "md5": "85cb64a996600b20e6fadb0d05ee78b5", - "parent_gene": "", - "protein_md5": "e6ab163f9b7f7c6d5de86808c420762e", - "protein_translation": "MNLNATILGQAIAFVLFVLFCMKYVWPPLMAAIEKRQKEIADGLASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIVAQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL", - "protein_translation_length": 156, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948253" - ], - [ - "gene_synonym", - "EcoGene:EG10102" - ], - [ - "gene_synonym", - "papH" - ], - [ - "gene_synonym", - "JW3715" - ], - [ - "gene_synonym", - "ECK3730" - ], - [ - "gene_synonym", - "GI:16131605" - ], - [ - "gene_synonym", - "uncE" - ], - [ - "gene_synonym", - "b3737" - ], - [ - "gene_synonym", - "ASAP:ABE-0012220" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68699" - ], - [ - "gene_synonym", - "atpE" - ], - [ - "gene_synonym", - "NP_418193.1" - ] - ], - "dna_sequence": "ATGGAAAACCTGAATATGGATCTGCTGTACATGGCTGCCGCTGTGATGATGGGTCTGGCGGCAATCGGTGCTGCGATCGGTATCGGCATCCTCGGGGGTAAATTCCTGGAAGGCGCAGCGCGTCAACCTGATCTGATTCCTCTGCTGCGTACTCAGTTCTTTATCGTTATGGGTCTGGTGGATGCTATCCCGATGATCGCTGTAGGTCTGGGTCTGTACGTGATGTTCGCTGTCGCGTAG", - "dna_sequence_length": 240, - "functions": [ - "F0 sector of membrane-bound ATP synthase, subunit c" - ], - "id": "CDS_3686", - "location": [ - [ - "NC_000913", - 3921189, - "-", - 240 - ] - ], - "md5": "8cc236bb40451f64bfbc013493156030", - "parent_gene": "", - "protein_md5": "56b533cc370c1e28d908debdcf79489b", - "protein_translation": "MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA", - "protein_translation_length": 79, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948252" - ], - [ - "gene_synonym", - "JW3716" - ], - [ - "gene_synonym", - "NP_418194.1" - ], - [ - "gene_synonym", - "papD" - ], - [ - "gene_synonym", - "ECK3731" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB98" - ], - [ - "gene_synonym", - "GI:16131606" - ], - [ - "gene_synonym", - "ASAP:ABE-0012222" - ], - [ - "gene_synonym", - "uncB" - ], - [ - "gene_synonym", - "atpB" - ], - [ - "gene_synonym", - "EcoGene:EG10099" - ], - [ - "gene_synonym", - "b3738" - ] - ], - "dna_sequence": "ATGGCTTCAGAAAATATGACGCCGCAGGATTACATAGGACACCACCTGAATAACCTTCAGCTGGACCTGCGTACATTCTCGCTGGTGGATCCACAAAACCCCCCAGCCACCTTCTGGACAATCAATATTGACTCCATGTTCTTCTCGGTGGTGCTGGGTCTGTTGTTCCTGGTTTTATTCCGTAGCGTAGCCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTAATGGTAGCGTGAAAGACATGTACCATGGCAAAAGCAAGCTGATTGCTCCGCTGGCCCTGACGATCTTCGTCTGGGTATTCCTGATGAACCTGATGGATTTACTGCCTATCGACCTGCTGCCGTACATTGCTGAACATGTACTGGGTCTGCCTGCACTGCGTGTGGTTCCGTCTGCGGACGTGAACGTAACGCTGTCTATGGCACTGGGCGTATTTATCCTGATTCTGTTCTACAGCATCAAAATGAAAGGCATCGGCGGCTTCACGAAAGAGTTGACGCTGCAGCCGTTCAATCACTGGGCGTTCATTCCTGTCAACTTAATCCTTGAAGGGGTAAGCCTGCTGTCCAAACCAGTTTCACTCGGTTTGCGACTGTTCGGTAACATGTATGCCGGTGAGCTGATTTTCATTCTGATTGCTGGTCTGTTGCCGTGGTGGTCACAGTGGATCCTGAATGTGCCGTGGGCCATTTTCCACATCCTGATCATTACGCTGCAAGCCTTCATCTTCATGGTTCTGACGATCGTCTATCTGTCGATGGCGTCTGAAGAACATTAA", - "dna_sequence_length": 816, - "functions": [ - "F0 sector of membrane-bound ATP synthase, subunit a" - ], - "id": "CDS_3687", - "location": [ - [ - "NC_000913", - 3922051, - "-", - 816 - ] - ], - "md5": "84ceb80fd90d0d63997138586633a5b1", - "parent_gene": "", - "protein_md5": "cffe2ccf494694423271744bb8ba736c", - "protein_translation": "MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINIDSMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH", - "protein_translation_length": 271, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948251" - ], - [ - "gene_synonym", - "EcoGene:EG10106" - ], - [ - "gene_synonym", - "GI:90111645" - ], - [ - "gene_synonym", - "ECK3732" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABC0" - ], - [ - "gene_synonym", - "uncI" - ], - [ - "gene_synonym", - "NP_418195.2" - ], - [ - "gene_synonym", - "atpI" - ], - [ - "gene_synonym", - "ASAP:ABE-0012224" - ], - [ - "gene_synonym", - "JW5611" - ], - [ - "gene_synonym", - "b3739" - ] - ], - "dna_sequence": "ATGTCTGTGTCGCTCGTGAGTCGAAACGTTGCTCGGAAGCTTCTGCTCGTTCAGTTACTGGTGGTGATAGCAAGTGGATTGCTGTTCAGCCTCAAAGACCCCTTCTGGGGCGTCTCTGCAATAAGCGGGGGCCTGGCAGTCTTTCTGCCTAACGTTTTGTTTATGATATTTGCCTGGCGTCACCAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTGGCGAAGCTTTCAAAGTTCTGGCGATGTTGGTGTTACTGGTGGTGGCGTTGGCGGTTTTAAAGGCGGTATTCTTGCCGCTGATCGTTACGTGGGTTTTGGTGCTGGTGGTTCAGATACTGGCACCGGCTGTAATTAACAACAAAGGGTAA", - "dna_sequence_length": 381, - "functions": [ - "ATP synthase, membrane-bound accessory factor" - ], - "id": "CDS_3688", - "location": [ - [ - "NC_000913", - 3922440, - "-", - 381 - ] - ], - "md5": "7968e5d8e36288a5fc164d1e755ecadc", - "parent_gene": "", - "protein_md5": "e48c3498685547481d38ac4b6ecf0af5", - "protein_translation": "MSVSLVSRNVARKLLLVQLLVVIASGLLFSLKDPFWGVSAISGGLAVFLPNVLFMIFAWRHQAHTPAKGRVAWTFAFGEAFKVLAMLVLLVVALAVLKAVFLPLIVTWVLVLVVQILAPAVINNKG", - "protein_translation_length": 126, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131608" - ], - [ - "gene_synonym", - "NP_418196.1" - ], - [ - "gene_synonym", - "rsmG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6U5" - ], - [ - "gene_synonym", - "ECK3733" - ], - [ - "gene_synonym", - "JW3718" - ], - [ - "gene_synonym", - "EcoGene:EG10376" - ], - [ - "gene_synonym", - "b3740" - ], - [ - "gene_synonym", - "gidB" - ], - [ - "gene_synonym", - "GeneID:948250" - ], - [ - "gene_synonym", - "ASAP:ABE-0012229" - ] - ], - "dna_sequence": "GTGCTCAACAAACTCTCCTTACTGCTGAAAGACGCAGGTATTTCGCTTACCGATCACCAGAAAAACCAGCTTATTGCCTACGTGAATATGCTGCATAAATGGAACAAAGCGTACAACCTGACTTCGGTCCGCGATCCTAATGAGATGCTGGTACGCCATATTCTCGATAGCATTGTGGTGGCACCGTATCTGCAAGGTGAACGGTTTATCGATGTCGGCACCGGACCAGGACTGCCAGGCATTCCACTCTCTATCGTGCGTCCTGAAGCCCATTTCACTCTGTTGGATAGCCTTGGTAAACGCGTGCGTTTCCTTCGTCAGGTGCAACATGAGCTTAAACTGGAGAATATTGAACCAGTACAGAGCAGGGTAGAAGAGTTTCCTTCAGAGCCGCCATTTGATGGCGTAATTAGCCGCGCTTTTGCCTCTCTGAACGATATGGTGAGCTGGTGCCACCATCTTCCTGGTGAGCAAGGCCGTTTCTACGCGCTGAAAGGGCAAATGCCGGAAGATGAAATCGCTTTGTTGCCCGAAGAATATCAGGTCGAATCAGTGGTTAAACTTCAGGTTCCAGCCCTGGATGGCGAACGTCATCTGGTGGTGATTAAAGCAAATAAAATTTAA", - "dna_sequence_length": 624, - "functions": [ - "16S rRNA m(7)G527 methyltransferase, SAM-dependent", - "glucose-inhibited cell-division protein" - ], - "id": "CDS_3689", - "location": [ - [ - "NC_000913", - 3923680, - "-", - 624 - ] - ], - "md5": "c30425a24d12722a585d9bafd627a451", - "parent_gene": "", - "protein_md5": "724e9a4c8f60866ed92d24f2d93456d7", - "protein_translation": "MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRDPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKANKI", - "protein_translation_length": 207, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131609" - ], - [ - "gene_synonym", - "mnmG" - ], - [ - "gene_synonym", - "mnmB" - ], - [ - "gene_synonym", - "NP_418197.1" - ], - [ - "gene_synonym", - "GeneID:948248" - ], - [ - "gene_synonym", - "JW3719" - ], - [ - "gene_synonym", - "ECK3734" - ], - [ - "gene_synonym", - "b3741" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6U3" - ], - [ - "gene_synonym", - "gidA" - ], - [ - "gene_synonym", - "trmF" - ], - [ - "gene_synonym", - "EcoGene:EG10375" - ], - [ - "gene_synonym", - "ASAP:ABE-0012231" - ] - ], - "dna_sequence": "ATGTTTTATCCGGATCCTTTTGACGTCATCATCATTGGCGGGGGTCATGCAGGCACCGAGGCCGCGATGGCCGCGGCGCGTATGGGTCAACAGACTCTGCTTTTGACACACAATATCGACACTCTGGGGCAGATGAGCTGCAACCCGGCGATCGGCGGTATTGGGAAGGGACATCTGGTAAAAGAAGTGGATGCACTCGGCGGTCTGATGGCGAAAGCGATCGATCAGGCGGGTATCCAGTTTAGGATACTAAACGCAAGCAAAGGACCGGCGGTTCGCGCTACCCGAGCTCAGGCGGATCGTGTGCTCTACCGTCAGGCGGTACGTACGGCGCTGGAGAACCAACCGAACCTGATGATCTTCCAGCAGGCGGTTGAAGATCTTATTGTCGAAAACGATCGCGTGGTCGGTGCTGTTACCCAAATGGGACTGAAGTTCCGTGCCAAAGCCGTCGTGCTCACCGTTGGGACGTTCCTCGACGGTAAAATTCATATCGGTCTGGATAATTACAGCGGTGGCCGTGCTGGTGATCCGCCGTCCATTCCGCTTTCTCGCCGTTTGCGTGAACTGCCGCTGCGCGTTGGTCGTCTGAAAACCGGGACACCACCGCGTATTGATGCTCGAACCATCGACTTTAGCGTACTGGCGCAACAGCATGGCGATAACCCAATGCCGGTATTCTCGTTTATGGGCAATGCGTCCCAGCATCCCCAGCAGGTGCCGTGTTATATCACTCATACCAACGAGAAAACCCATGATGTGATCCGCAGTAACCTCGATCGTAGCCCAATGTACGCAGGGGTGATCGAAGGTGTCGGCCCACGCTACTGCCCGTCGATCGAAGACAAAGTCATGCGCTTCGCCGACAGAAATCAGCATCAGATCTTCCTTGAACCGGAAGGACTGACCTCTAATGAAATTTATCCGAACGGTATCTCCACCAGCCTGCCGTTCGATGTGCAGATGCAAATCGTCCGCTCTATGCAGGGGATGGAAAACGCGAAGATCGTGCGTCCGGGTTATGCCATTGAGTATGACTTCTTCGATCCTCGCGACCTGAAACCGACGCTGGAGAGCAAGTTTATCCAGGGGCTGTTCTTTGCTGGTCAGATTAACGGCACTACCGGTTACGAAGAAGCCGCTGCGCAAGGTTTGCTGGCCGGTCTTAACGCTGCCCGTCTGTCTGCTGACAAAGAAGGTTGGGCTCCGGCACGTTCTCAGGCGTATCTCGGCGTACTAGTTGATGACCTGTGCACTTTAGGAACCAAAGAACCGTATCGTATGTTTACTTCGCGCGCAGAATATCGTCTGATGCTACGCGAAGATAATGCGGATCTGCGTTTGACTGAAATCGGTCGTGAACTGGGCCTGGTGGATGACGAACGTTGGGCGCGCTTTAACGAGAAACTTGAGAATATCGAGCGTGAGCGTCAGCGTCTGAAATCGACCTGGGTAACCCCGTCGGCGGAAGCTGCAGCCGAAGTGAATGCTCACCTGACTGCGCCGCTTTCCCGTGAAGCCAGTGGTGAAGATCTGCTGCGTCGTCCGGAAATGACTTATGAAAAATTAACCACGCTGACGCCGTTTGCCCCTGCGTTGACAGACGAACAGGCGGCGGAACAGGTTGAGATTCAGGTTAAATACGAAGGTTATATCGCGCGCCAGCAAGATGAGATCGAAAAGCAGCTGCGTAACGAGAACACCCTGCTACCCGCGACACTGGATTACCGCCAGGTATCCGGTCTTTCTAACGAAGTGATCGCCAAACTTAACGATCACAAACCAGCCTCTATCGGCCAAGCTTCGCGTATTTCTGGCGTCACGCCTGCGGCCATCTCCATTCTGCTGGTGTGGCTGAAAAAACAGGGTATGCTGCGTCGTAGCGCATAA", 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"protein_translation_length": 629, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418198.1" - ], - [ - "gene_synonym", - "GeneID:948249" - ], - [ - "gene_synonym", - "mioC" - ], - [ - "gene_synonym", - "EcoGene:EG11199" - ], - [ - "gene_synonym", - "JW3720" - ], - [ - "gene_synonym", - "ECK3736" - ], - [ - "gene_synonym", - "GI:16131610" - ], - [ - "gene_synonym", - "yieB" - ], - [ - "gene_synonym", - "ASAP:ABE-0012235" - ], - [ - "gene_synonym", - "b3742" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03817" - ] - ], - "dna_sequence": "ATGGCAGATATCACTCTTATCAGCGGCAGCACCCTCGGCGGTGCCGAATATGTAGCAGAACACCTGGCTGAAAAGCTGGAAGAGGCGGGTTTTACCACCGAAACGCTGCACGGTCCGCTGTTAGAAGATTTACCTGCCTCAGGGATCTGGCTGGTTATCAGCTCCACCCACGGTGCCGGAGATATTCCGGACAACCTTTCTCCTTTCTATGAAGCATTGCAGGAACAGAAGCCCGATCTTTCTGCAGTCCGCTTTGGCGCAATCGGTATTGGCAGTCGTGAATATGACACCTTTTGTGGGGCTATCGATAAACTCGAGGCAGAACTCAAAAATTCCGGTGCAAAACAGACAGGCGAAACACTGAAGATCAACATTCTTGATCACGACATTCCGGAAGATCCGGCAGAAGAATGGCTGGGATCGTGGGTTAATTTACTCAAATAA", - "dna_sequence_length": 444, - "functions": [ - "FMN-binding protein MioC" - ], - "id": "CDS_3691", - "location": [ - [ - "NC_000913", - 3926455, - "-", - 444 - ] - ], - "md5": "9cf2c8b20e1b692c8ecb830ec347b0ff", - "parent_gene": "", - "protein_md5": "4bfc2ed15c60bb6bf4d68fc54f668b53", - "protein_translation": "MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDLPASGIWLVISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAIDKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWVNLLK", - "protein_translation_length": 147, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACI6" - ], - [ - "gene_synonym", - "JW3721" - ], - [ - "gene_synonym", - "ECK3737" - ], - [ - "gene_synonym", - "GI:16131611" - ], - [ - "gene_synonym", - "EcoGene:EG10093" - ], - [ - "gene_synonym", - "GeneID:948259" - ], - [ - "gene_synonym", - "b3743" - ], - [ - "gene_synonym", - "ASAP:ABE-0012237" - ], - [ - "gene_synonym", - "NP_418199.1" - ], - [ - "gene_synonym", - "asnC" - ] - ], - "dna_sequence": "ATGGAAAATTATCTGATCGACAATCTGGACCGTGGCATCCTGGAAGCATTAATGGGCAATGCGCGCACCGCTTACGCCGAACTGGCGAAACAATTTGGCGTCAGTCCGGGGACGATTCACGTTCGAGTAGAGAAAATGAAGCAGGCGGGGATCATTACCGGGGCGCGTATTGATGTCAGCCCGAAGCAGCTCGGTTATGACGTAGGCTGCTTTATCGGCATTATATTAAAGAGCGCCAAAGACTACCCTTCCGCGCTGGCAAAGCTGGAAAGCCTTGATGAAGTCACTGAAGCCTATTACACAACCGGCCACTACAGCATCTTTATAAAAGTGATGTGCCGTTCGATCGACGCTCTCCAGCATGTACTTATCAACAAGATCCAAACAATTGATGAAATTCAGTCCACCGAGACATTGATCGTCCTGCAAAACCCGATCATGCGTACCATCAAGCCCTGA", - "dna_sequence_length": 459, - "functions": [ - "transcriptional activator of asnA", - "autorepressor" - ], - "id": "CDS_3692", - "location": [ - [ - "NC_000913", - 3927003, - "-", - 459 - ] - ], - "md5": "f054e6beee48ecf4e320df6bf8e0a908", - "parent_gene": "", - "protein_md5": "8aa5523875d6f43ba583137b1e8cb515", - "protein_translation": "MENYLIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVEKMKQAGIITGARIDVSPKQLGYDVGCFIGIILKSAKDYPSALAKLESLDEVTEAYYTTGHYSIFIKVMCRSIDALQHVLINKIQTIDEIQSTETLIVLQNPIMRTIKP", - "protein_translation_length": 152, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3738" - ], - [ - "gene_synonym", - "NP_418200.1" - ], - [ - "gene_synonym", - "JW3722" - ], - [ - "gene_synonym", - "GI:16131612" - ], - [ - "gene_synonym", - "EcoGene:EG10091" - ], - [ - "gene_synonym", - "ASAP:ABE-0012242" - ], - [ - "gene_synonym", - "b3744" - ], - [ - "gene_synonym", - "GeneID:948258" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00963" - ], - [ - "gene_synonym", - "asnA" - ] - ], - "dna_sequence": "ATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGCAGGTAAAAGTGAAAGCTCTGCCTGATGCCCAGTTCGAAGTGGTTCATTCACTGGCGAAGTGGAAACGTCAGACCTTAGGGCAACACGACTTCAGCGCGGGCGAAGGGCTGTACACGCACATGAAAGCCCTTCGCCCCGATGAAGACCGTCTTTCTCCGTTGCACTCGGTCTATGTTGACCAGTGGGACTGGGAACGCGTAATGGGCGACGGTGAGCGTCAATTCTCGACTCTGAAAAGCACGGTAGAGGCGATCTGGGCGGGAATTAAAGCAACCGAAGCTGCGGTTAGCGAAGAGTTTGGCCTGGCACCGTTCCTGCCGGATCAGATCCACTTCGTACACAGCCAGGAGTTACTGTCTCGTTATCCGGATCTTGATGCCAAAGGGCGTGAGCGGGCGATAGCGAAAGATCTTGGCGCGGTATTCCTTGTCGGGATTGGCGGCAAGCTGAGCGATGGTCATCGCCACGACGTGCGCGCACCGGATTATGATGACTGGAGCACCCCGTCAGAGCTGGGCCATGCGGGTCTGAACGGCGATATTCTGGTGTGGAACCCGGTACTGGAAGATGCGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAA", - "dna_sequence_length": 993, - "functions": [ - "asparagine synthetase A" - ], - "id": "CDS_3693", - "location": [ - [ - "NC_000913", - 3927155, - "+", - 993 - ] - ], - "md5": "ffd86e3163f26565b24e11e03d686b37", - "parent_gene": "", - "protein_md5": "dfc2b4a3f3b43c8ba9564d8a53e155e1", - "protein_translation": "MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEEFGLAPFLPDQIHFVHSQELLSRYPDLDAKGRERAIAKDLGAVFLVGIGGKLSDGHRHDVRAPDYDDWSTPSELGHAGLNGDILVWNPVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLELEWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQCGVWPAAVRESVPSLL", - "protein_translation_length": 330, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yieM" - ], - [ - "gene_synonym", - "ECK3739" - ], - [ - "gene_synonym", - "viaA" - ], - [ - "gene_synonym", - "GeneID:948257" - ], - [ - "gene_synonym", - "yieD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADN0" - ], - [ - "gene_synonym", - "b3745" - ], - [ - "gene_synonym", - "ASAP:ABE-0012244" - ], - [ - "gene_synonym", - "YP_026243.1" - ], - [ - "gene_synonym", - "EcoGene:EG11730" - ], - [ - "gene_synonym", - "JW5610" - ], - [ - "gene_synonym", - "GI:49176398" - ] - ], - "dna_sequence": "ATGCTAACGCTGGATACGCTTAATGTGATGCTGGCCGTCAGCGAAGAGGGATTGATCGAAGAGATGATCATCGCACTGCTGGCCTCACCGCAGCTGGCGGTCTTCTTTGAAAAATTCCCACGCCTGAAGGCGGCAATCACTGATGATGTTCCCCGCTGGCGTGAAGCGCTGCGCAGTCGGCTGAAAGATGCCCGAGTCCCGCCGGAACTCACCGAAGAGGTGATGTGCTATCAGCAAAGCCAGCTCCTCTCCACGCCACAGTTTATTGTGCAGCTACCACAGATCCTGGACTTACTGCATCGTCTGAATTCTCCATGGGCAGAACAAGCCCGACAGTTGGTTGATGCTAACAGCACGATCACTTCAGCGTTACACACGCTTTTTCTCCAGCGTTGGCGTTTAAGTCTGATCGTGCAAGCAACGACGTTAAATCAACAGCTATTAGAAGAAGAACGCGAACAACTGTTGAGTGAAGTTCAGGAACGCATGACGCTGAGCGGACAACTTGAACCGATTCTCGCAGATAACAATACTGCAGCTGGTCGTCTGTGGGATATGAGCGCCGGTCAGCTTAAACGTGGCGACTATCAGTTGATTGTGAAATACGGTGAATTTCTTAACGAACAGCCGGAACTGAAACGCCTGGCAGAGCAGCTGGGGCGTTCTCGGGAAGCCAAATCAATACCGCGCAACGATGCGCAGATGGAAACCTTCCGCACCATGGTGCGCGAACCGGCGACGGTTCCTGAGCAGGTTGATGGTCTGCAACAAAGCGATGATATTTTACGTCTCCTGCCGCCAGAACTGGCGACACTAGGGATAACGGAACTGGAGTATGAGTTTTACCGTCGGCTGGTGGAAAAACAGTTGCTCACCTATCGCCTGCACGGTGAGTCGTGGCGTGAAAAAGTGATCGAACGTCCGGTGGTACATAAAGATTACGATGAACAGCCGCGCGGGCCGTTTATTGTCTGTGTGGATACTTCCGGCTCAATGGGCGGCTTTAATGAACAGTGTGCGAAAGCGTTCTGCCTGGCCTTGATGCGCATTGCTCTCGCAGAAAACCGGCGCTGCTATATTATGCTATTTTCCACCGAGATCGTCCGTTATGAGCTTTCAGGCCCACAAGGCATCGAACAAGCAATCCGTTTTTTAAGCCAGCAGTTTCGTGGCGGCACCGATCTTGCCAGTTGTTTTCGCGCCATTATGGAACGCTTGCAAAGCAGGGAATGGTTTGATGCCGATGCGGTGGTGATTTCTGATTTTATCGCTCAGCGGTTGCCTGACGACGTGACGAGTAAAGTGAAAGAGCTGCAGCGGGTACATCAGCATCGCTTTCATGCCGTGGCGATGTCGGCACACGGCAAACCCGGCATCATGCGCATTTTCGATCATATCTGGCGCTTTGATACCGGGATGCGAAGCCGCCTGCTCAGACGCTGGCGGCGATAA", - "dna_sequence_length": 1452, - "functions": [ - "stimulator of RavA ATPase activity", - "von Willebrand factor domain protein" - ], - "id": "CDS_3694", - "location": [ - [ - "NC_000913", - 3929603, - "-", - 1452 - ] - ], - "md5": "2c65aab43035b82bd452293e832ef4f2", - "parent_gene": "", - "protein_md5": "3f68597921753db6de1a80dbcc936058", - "protein_translation": "MLTLDTLNVMLAVSEEGLIEEMIIALLASPQLAVFFEKFPRLKAAITDDVPRWREALRSRLKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILDLLHRLNSPWAEQARQLVDANSTITSALHTLFLQRWRLSLIVQATTLNQQLLEEEREQLLSEVQERMTLSGQLEPILADNNTAAGRLWDMSAGQLKRGDYQLIVKYGEFLNEQPELKRLAEQLGRSREAKSIPRNDAQMETFRTMVREPATVPEQVDGLQQSDDILRLLPPELATLGITELEYEFYRRLVEKQLLTYRLHGESWREKVIERPVVHKDYDEQPRGPFIVCVDTSGSMGGFNEQCAKAFCLALMRIALAENRRCYIMLFSTEIVRYELSGPQGIEQAIRFLSQQFRGGTDLASCFRAIMERLQSREWFDADAVVISDFIAQRLPDDVTSKVKELQRVHQHRFHAVAMSAHGKPGIMRIFDHIWRFDTGMRSRLLRRWRR", - "protein_translation_length": 483, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yieN" - ], - [ - "gene_synonym", - "GeneID:948256" - ], - [ - "gene_synonym", - "GI:90111646" - ], - [ - "gene_synonym", - "JW3725" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31473" - ], - [ - "gene_synonym", - "NP_418202.4" - ], - [ - "gene_synonym", - "ECK3740" - ], - [ - "gene_synonym", - "ASAP:ABE-0012247" - ], - [ - "gene_synonym", - "b3746" - ], - [ - "gene_synonym", - "EcoGene:EG11731" - ], - [ - "gene_synonym", - "ravA" - ] - ], - "dna_sequence": "ATGGCTCACCCTCATTTATTAGCGGAAAGAATTTCCCGCCTGAGCAGTTCGTTGGAAAAGGGGCTTTATGAACGTAGCCACGCCATCCGCTTGTGTTTATTAGCGGCATTAAGTGGTGAAAGTGTGTTCCTCCTTGGCCCGCCAGGTATTGCCAAAAGTTTGATCGCCCGGCGCTTAAAATTCGCCTTTCAGAATGCCCGCGCGTTTGAATATCTGATGACCCGCTTCTCCACGCCGGAAGAAGTTTTTGGTCCCCTTTCTATTCAGGCGCTAAAAGATGAAGGGCGCTATGAACGTTTAACCAGCGGTTACCTGCCGGAAGCAGAAATTGTCTTTCTGGATGAGATCTGGAAAGCGGGCCCGGCAATTCTTAATACCTTGCTCACCGCCATTAACGAGCGCCAGTTCCGCAACGGTGCACACGTAGAAAAAATCCCGATGCGTCTGCTGGTGGCGGCCTCCAACGAGCTGCCGGAAGCAGACAGCAGTCTGGAAGCGTTATATGACCGCATGCTGATTCGTCTGTGGTTAGATAAAGTGCAGGATAAAGCGAATTTCCGCTCCATGCTGACCAGTCAACAGGATGAAAACGACAATCCGGTTCCTGATGCCTTGCAGGTCACAGATGAAGAATATGAACGCTGGCAGAAAGAGATTGGTGAAATTACGCTGCCCGATCATGTATTTGAGCTGATTTTTATGCTGCGCCAGCAACTGGATAAATTACCGGATGCGCCTTATGTCTCGGATCGTCGCTGGAAAAAAGCGATCCGATTATTGCAGGCCAGCGCCTTTTTTAGCGGTCGCAGTGCTGTTGCCCCGGTAGATCTCATTTTGCTGAAAGATTGCCTGTGGTATGACGCGCAAAGCCTGAATTTGATACAACAACAAATTGATGTATTGATGACCGGTCACGCCTGGCAACAGCAAGGGATGTTGACTCGCCTTGGCGCGATTGTGCAACGTCACCTGCAACTCCAGCAGCAACAAAGCGATAAAACAGCCTTAACGGTAATTCGTCTGGGCGGCATTTTCAGCCGTCGTCAGCAGTATCAACTTCCTGTTAACGTTACTGCTTCCACTCTGACTCTACTGCTGCAAAAACCGTTAAAACTGCATGATATGGAAGTGGTTCATATCTCCTTTGAGCGTAGCGCGCTGGAACAGTGGCTGAGCAAAGGTGGTGAAATTCGCGGTAAACTGAACGGTATCGGCTTTGCCCAGAAACTGAATCTGGAAGTTGATAGCGCCCAACATCTTGTCGTTCGCGATGTAAGTTTACAAGGCAGTACGCTGGCACTTCCCGGTTCATCGGCTGAAGGTCTGCCTGGTGAAATAAAACAACAACTGGAAGAGCTTGAAAGCGACTGGCGCAAGCAACACGCTTTATTCAGCGAACAGCAAAAATGTCTGTTTATCCCTGGCGACTGGTTAGGTCGCATTGAAGCCAGCCTACAGGATGTCGGTGCACAGATTCGCCAGGCACAACAATGCTAA", - "dna_sequence_length": 1497, - "functions": [ - "hexameric AAA+ MoxR family ATPase, putative molecular chaperone" - ], - "id": "CDS_3695", - "location": [ - [ - "NC_000913", - 3931093, - "-", - 1497 - ] - ], - "md5": "ecf9fa3c0e207a555a4a5edd97681b1e", - "parent_gene": "", - "protein_md5": "301f47abd1f028ba65c3bac5d439af81", - "protein_translation": "MAHPHLLAERISRLSSSLEKGLYERSHAIRLCLLAALSGESVFLLGPPGIAKSLIARRLKFAFQNARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTSGYLPEAEIVFLDEIWKAGPAILNTLLTAINERQFRNGAHVEKIPMRLLVAASNELPEADSSLEALYDRMLIRLWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKEIGEITLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVDLILLKDCLWYDAQSLNLIQQQIDVLMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKTALTVIRLGGIFSRRQQYQLPVNVTASTLTLLLQKPLKLHDMEVVHISFERSALEQWLSKGGEIRGKLNGIGFAQKLNLEVDSAQHLVVRDVSLQGSTLALPGSSAEGLPGEIKQQLEELESDWRKQHALFSEQQKCLFIPGDWLGRIEASLQDVGAQIRQAQQC", - "protein_translation_length": 498, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "trkD" - ], - [ - "gene_synonym", - "YP_026244.1" - ], - [ - "gene_synonym", - "GI:49176400" - ], - [ - "gene_synonym", - "ASAP:ABE-0012251" - ], - [ - "gene_synonym", - "ECK3741" - ], - [ - "gene_synonym", - "JW5609" - ], - [ - "gene_synonym", - "EcoGene:EG11541" - ], - [ - "gene_synonym", - "b3747" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63183" - ], - [ - "gene_synonym", - "GeneID:948255" - ], - [ - "gene_synonym", - "kup" - ] - ], - "dna_sequence": "ATGAGCACTGATAATAAGCAATCATTGCCCGCGATTACCCTCGCGGCGATTGGAGTTGTCTACGGCGATATTGGTACCAGCCCGTTATATACACTTCGTGAATGTTTGTCCGGCCAGTTTGGTTTTGGCGTTGAACGCGATGCCGTGTTTGGCTTTTTATCGCTGATCTTCTGGCTGCTAATCTTTGTGGTTTCCATTAAATATCTCACCTTCGTGATGCGGGCAGATAACGCCGGTGAGGGGGGGATCCTGACGTTGATGTCGCTTGCCGGGCGTAATACGTCGGCGCGAACCACATCAATGCTGGTGATTATGGGGCTAATCGGCGGCAGCTTTTTCTATGGTGAAGTCGTCATAACACCCGCTATTTCGGTGATGTCAGCCATTGAAGGTCTGGAAATCGTCGCCCCGCAGCTGGATACCTGGATAGTTCCCCTCTCAATTATCGTTCTCACTTTATTATTTATGATTCAAAAACATGGCACGGCTATGGTCGGTAAGCTGTTTGCGCCGATCATGCTGACCTGGTTTTTGATTCTGGCAGGACTGGGGTTACGTAGCATTATTGCTAACCCGGAAGTGCTGCATGCGCTGAATCCAATGTGGGCGGTGCATTTCTTCCTTGAATACAAAACGGTTTCTTTTATTGCATTAGGGGCAGTGGTGTTGTCGATTACGGGGGTCGAGGCGCTGTATGCTGATATGGGGCACTTTGGTAAGTTCCCTATTCGCCTGGCGTGGTTCACCGTCGTATTACCTTCCTTGACCCTTAATTACTTCGGTCAGGGAGCGCTGTTGTTAAAGAACCCGGAAGCGATTAAGAACCCGTTCTTCCTGTTGGCACCGGACTGGGCGCTGATCCCGCTGCTGATCATCGCCGCACTGGCGACGGTAATTGCCTCGCAGGCGGTTATCTCTGGCGTCTTCTCATTGACGCGTCAGGCGGTACGTCTGGGATATTTGTCGCCGATGCGCATTATTCACACCTCCGAAATGGAGTCAGGGCAAATCTATATTCCGTTTGTGAACTGGATGCTCTATGTCGCGGTCGTGATTGTGATTGTCAGCTTTGAGCACTCCAGCAACCTGGCGGCGGCGTACGGGATTGCGGTGACCGGAACCATGGTGCTGACGTCTATTCTCTCGACTACCGTGGCACGTCAGAACTGGCACTGGAATAAGTATTTTGTTGCGCTGATCCTGATTGCTTTCCTTTGTGTCGATATTCCATTGTTCACCGCTAACCTCGATAAACTGCTCTCCGGCGGCTGGTTGCCATTGAGCCTCGGTACTGTGATGTTTATCGTGATGACCACCTGGAAGAGCGAGCGTTTCCGCTTGCTGCGGCGGATGCATGAACATGGTAACTCTCTGGAAGCGATGATTGCTTCGCTGGAGAAATCACCGCCTGTTCGCGTGCCCGGGACCGCGGTGTATATGTCGCGTGCAATCAACGTCATTCCCTTTGCGCTGATGCATAACCTTAAACATAACAAGGTATTGCATGAGCGGGTGATTCTGTTAACTCTGCGCACCGAAGACGCTCCATATGTCCATAACGTCCGTCGGGTACAGATTGAACAACTGTCGCCCACTTTCTGGCGCGTGGTGGCAAGTTATGGTTGGCGAGAAACGCCAAACGTAGAAGAAGTTTTCCACCGCTGCGGTCTGGAAGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTATGTCGCATGAGTCGTTGATCCTCGGCAAACGCCCGTGGTATTTGCGTCTGCGCGGCAAGCTGTACTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAA", - "dna_sequence_length": 1869, - "functions": [ - "potassium transporter" - ], - "id": "CDS_3696", - "location": [ - [ - "NC_000913", - 3931316, - "+", - 1869 - ] - ], - "md5": "ca30747a3ea532f3d8bb5b14a9a32458", - "parent_gene": "", - "protein_md5": "a2ea77af70193144cfef5c74f92f70d7", - "protein_translation": "MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLIFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKHGTAMVGKLFAPIMLTWFLILAGLGLRSIIANPEVLHALNPMWAVHFFLEYKTVSFIALGAVVLSITGVEALYADMGHFGKFPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLIIAALATVIASQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMESGQIYIPFVNWMLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARQNWHWNKYFVALILIAFLCVDIPLFTANLDKLLSGGWLPLSLGTVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALMHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSPTFWRVVASYGWRETPNVEEVFHRCGLEGLSCRMMETSFFMSHESLILGKRPWYLRLRGKLYLLLQRNALRAPDQFEIPPNRVIELGTQVEI", - "protein_translation_length": 622, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10817" - ], - [ - "gene_synonym", - "rbsP" - ], - [ - "gene_synonym", - "ASAP:ABE-0012256" - ], - [ - "gene_synonym", - "GI:90111647" - ], - [ - "gene_synonym", - "ECK3742" - ], - [ - "gene_synonym", - "rbsD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04982" - ], - [ - "gene_synonym", - "NP_418204.2" - ], - [ - "gene_synonym", - "JW5857" - ], - [ - "gene_synonym", - "b3748" - ], - [ - "gene_synonym", - "GeneID:948267" - ] - ], - "dna_sequence": "ATGAAAAAAGGCACCGTTCTTAATTCTGATATTTCATCGGTGATCTCCCGTCTGGGACATACCGATACGCTGGTGGTGTGTGATGCTGGTTTACCCATCCCCAAAAGTACAACGCGTATCGATATGGCATTAACCCAGGGTGTACCTTCTTTTATGCAGGTGCTGGGCGTCGTCACAAATGAAATGCAGGTCGAGGCGGCCATTATCGCGGAAGAGATCAAACACCATAATCCGCAACTCCACGAAACGTTGCTCACTCACCTTGAGCAGCTGCAAAAACACCAGGGAAATACCATTGAAATTCGTTACACCACGCATGAACAATTCAAACAACAAACCGCAGAAAGTCAGGCGGTAATTCGCAGCGGAGAATGTTCTCCGTATGCGAATATCATTCTCTGTGCTGGCGTGACGTTCTGA", - "dna_sequence_length": 420, - "functions": [ - "D-ribose pyranase" - ], - "id": "CDS_3697", - "location": [ - [ - "NC_000913", - 3933351, - "+", - 420 - ] - ], - "md5": "24ca0877ed69f06c87c48c48b760053e", - "parent_gene": "", - "protein_md5": "224c9b5cddbe7cce94d4b0d9efb673f8", - "protein_translation": "MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGVPSFMQVLGVVTNEMQVEAAIIAEEIKHHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVTF", - "protein_translation_length": 139, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3728" - ], - [ - "gene_synonym", - "NP_418205.1" - ], - [ - "gene_synonym", - "rbsA" - ], - [ - "gene_synonym", - "GI:16131617" - ], - [ - "gene_synonym", - "ASAP:ABE-0012259" - ], - [ - "gene_synonym", - "ECK3743" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04983" - ], - [ - "gene_synonym", - "b3749" - ], - [ - "gene_synonym", - "rbsP" - ], - [ - "gene_synonym", - "EcoGene:EG10814" - ], - [ - "gene_synonym", - "GeneID:948264" - ], - [ - "gene_synonym", - "rbsT" - ] - ], - "dna_sequence": "ATGGAAGCATTACTTCAGCTTAAAGGCATCGATAAAGCCTTCCCGGGCGTAAAAGCCCTCTCGGGCGCAGCGTTAAATGTCTATCCGGGCCGCGTGATGGCGCTGGTGGGCGAAAACGGCGCGGGTAAATCCACCATGATGAAAGTGCTTACTGGCATCTATACTCGCGATGCCGGTACGCTTTTATGGCTGGGGAAAGAAACGACATTTACCGGGCCAAAATCTTCCCAGGAAGCCGGGATTGGGATTATCCATCAGGAACTGAACCTGATCCCGCAGTTGACCATTGCCGAAAACATTTTCCTCGGTCGTGAGTTTGTTAATCGCTTTGGCAAAATTGACTGGAAAACCATGTATGCCGAAGCGGATAAATTGCTGGCTAAACTTAACCTGCGCTTTAAAAGCGACAAGCTGGTGGGCGATCTTTCCATCGGTGACCAGCAAATGGTTGAAATCGCCAAAGTGCTGAGCTTTGAGTCGAAAGTCATCATTATGGATGAACCGACCGATGCGCTGACCGATACCGAAACCGAATCCCTGTTCCGCGTCATCCGCGAGCTGAAATCGCAAGGCCGCGGTATTGTCTATATCTCCCACCGCATGAAAGAAATCTTCGAGATTTGCGATGACGTTACCGTTTTTCGTGATGGGCAATTTATTGCTGAGCGCGAAGTGGCATCACTGACCGAAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCGAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATGGCCTGGCAAACGGCATTGTGTATATCTCCGAAGACCGTAAACGTGACGGTTTAGTGTTGGGCATGTCAGTAAAAGAGAACATGTCGCTGACAGCGCTGCGCTACTTCAGCCGCGCTGGCGGCAGTTTGAAGCATGCCGATGAACAGCAGGCTGTGAGTGATTTCATTCGTCTGTTTAATGTGAAAACTCCGTCGATGGAACAGGCAATTGGTCTGCTTTCCGGTGGCAATCAGCAAAAAGTGGCGATTGCCCGCGGTCTGATGACACGCCCCAAAGTGTTGATCCTTGATGAACCTACCCGTGGCGTAGATGTCGGCGCGAAAAAAGAGATCTATCAACTGATTAACCAGTTCAAAGCCGATGGCTTGAGCATCATTCTGGTGTCATCGGAGATGCCAGAAGTATTAGGCATGAGCGATCGCATCATCGTCATGCATGAAGGGCATCTCAGCGGGGAATTTACTCGTGAGCAGGCCACCCAGGAAGTGTTAATGGCTGCCGCTGTGGGCAAGCTTAATCGCGTGAATCAGGAGTAA", - "dna_sequence_length": 1506, - "functions": [ - "D-ribose ABC transporter ATPase" - ], - "id": "CDS_3698", - "location": [ - [ - "NC_000913", - 3933778, - "+", - 1506 - ] - ], - "md5": "da9c555b70b5b8dc27c17325d2dd0652", - "parent_gene": "", - "protein_md5": "23707f97023e8f1b82c6afef143a8cb8", - "protein_translation": "MEALLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTLLWLGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAEADKLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGRKLEDQYPHLDKAPGDIRLKVDNLCGPGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQATQEVLMAAAVGKLNRVNQE", - "protein_translation_length": 501, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3729" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGI1" - ], - [ - "gene_synonym", - "EcoGene:EG10816" - ], - [ - "gene_synonym", - "GI:16131618" - ], - [ - "gene_synonym", - "NP_418206.1" - ], - [ - "gene_synonym", - "rbsC" - ], - [ - "gene_synonym", - "rbsT" - ], - [ - "gene_synonym", - "b3750" - ], - [ - "gene_synonym", - "ASAP:ABE-0012261" - ], - [ - "gene_synonym", - "rbsP" - ], - [ - "gene_synonym", - "GeneID:948262" - ], - [ - "gene_synonym", - "ECK3744" - ] - ], - "dna_sequence": "ATGACAACCCAGACTGTCTCTGGTCGCCGTTATTTCACGAAAGCGTGGCTGATGGAGCAGAAATCGCTTATCGCTCTGCTGGTGCTGATCGCGATTGTCTCGACGTTAAGCCCGAACTTTTTCACCATCAATAACTTATTCAATATTCTCCAGCAAACCTCAGTGAACGCCATTATGGCGGTCGGGATGACGCTGGTGATCCTGACGTCGGGCATCGACTTATCGGTAGGTTCTCTGTTGGCGCTGACCGGCGCAGTTGCTGCATCTATCGTCGGCATTGAAGTCAATGCGCTGGTGGCTGTCGCTGCTGCTCTCGCGTTAGGTGCCGCAATTGGTGCGGTAACCGGGGTGATTGTAGCGAAAGGTCGCGTCCAGGCGTTTATCGCTACGCTGGTTATGATGCTTTTACTGCGCGGCGTGACCATGGTTTATACCAACGGTAGCCCAGTGAATACCGGCTTTACTGAGAACGCCGATCTGTTTGGCTGGTTTGGTATTGGTCGTCCGCTGGGCGTACCGACGCCAGTCTGGATCATGGGGATTGTCTTCCTCGCGGCCTGGTACATGCTGCATCACACGCGTCTGGGGCGTTACATCTACGCGCTGGGCGGCAACGAAGCGGCAACGCGTCTTTCTGGTATCAACGTCAATAAAATCAAAATCATCGTCTATTCTCTTTGTGGTCTGCTGGCATCGCTGGCCGGGATCATTGAAGTGGCGCGTCTCTCCTCCGCACAACCCACGGCGGGGACTGGCTATGAGCTGGATGCTATTGCTGCGGTGGTTCTGGGCGGTACGAGTCTGGCGGGCGGAAAAGGTCGCATTGTTGGGACGTTGATCGGCGCATTAATTCTTGGCTTCCTTAATAATGGATTGAATTTGTTAGGTGTTTCCTCCTATTACCAGATGATCGTCAAAGCGGTGGTGATTTTGCTGGCGGTGCTGGTAGACAACAAAAAGCAGTAA", - "dna_sequence_length": 966, - "functions": [ - "D-ribose ABC transporter permease" - ], - "id": "CDS_3699", - "location": [ - [ - "NC_000913", - 3935288, - "+", - 966 - ] - ], - "md5": "b161b0ddd9be046fe53ce0f6f7ca5e53", - "parent_gene": "", - "protein_md5": "9f0be77d9917763c8c42a8459a9228f5", - "protein_translation": "MTTQTVSGRRYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALTGAVAASIVGIEVNALVAVAAALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVWIMGIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKKQ", - "protein_translation_length": 321, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rbsB" - ], - [ - "gene_synonym", - "EcoGene:EG10815" - ], - [ - "gene_synonym", - "GI:16131619" - ], - [ - "gene_synonym", - "ECK3745" - ], - [ - "gene_synonym", - "JW3730" - ], - [ - "gene_synonym", - "ASAP:ABE-0012264" - ], - [ - "gene_synonym", - "b3751" - ], - [ - "gene_synonym", - "NP_418207.1" - ], - [ - "gene_synonym", - "GeneID:948261" - ], - [ - "gene_synonym", - "prlB" - ], - [ - "gene_synonym", - "rbsP" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02925" - ] - ], - "dna_sequence": "ATGAACATGAAAAAACTGGCTACCCTGGTTTCCGCTGTTGCGCTAAGCGCCACCGTCAGTGCGAATGCGATGGCAAAAGACACCATCGCGCTGGTGGTCTCCACGCTTAACAACCCGTTCTTTGTATCGCTGAAAGATGGCGCGCAGAAAGAGGCGGATAAACTTGGCTATAACCTGGTGGTGCTGGACTCCCAGAACAACCCGGCGAAAGAGCTGGCGAACGTGCAGGACTTAACCGTTCGCGGCACAAAAATTCTGCTGATTAACCCGACCGACTCCGACGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCAAGGCATTGCTGGTACATCCGCAGCCCGTGAACGTGGCGAAGGCTTCCAGCAGGCCGTTGCTGCTCACAAGTTTAATGTTCTTGCCAGCCAGCCAGCAGATTTTGATCGCATTAAAGGTTTGAACGTAATGCAGAACCTGTTGACCGCTCATCCGGATGTTCAGGCTGTATTCGCGCAGAATGATGAAATGGCGCTGGGCGCGCTGCGCGCACTGCAAACTGCCGGTAAATCGGATGTGATGGTCGTCGGATTTGACGGTACACCGGATGGCGAAAAAGCGGTGAATGATGGCAAACTAGCAGCGACTATCGCTCAGCTACCCGATCAGATTGGCGCGAAAGGCGTCGAAACCGCAGATAAAGTGCTGAAAGGCGAGAAAGTTCAGGCTAAGTATCCGGTTGATCTGAAACTGGTTGTTAAGCAGTAG", - "dna_sequence_length": 891, - "functions": [ - "D-ribose ABC transporter periplasmic binding protein", - "ribose chemotaxis receptor" - ], - "id": "CDS_3700", - "location": [ - [ - "NC_000913", - 3936278, - "+", - 891 - ] - ], - "md5": "9eda04ccefa1493768923cc3539ce461", - "parent_gene": "", - "protein_md5": "c907cf8fadfa1c36047887a02c27fd25", - "protein_translation": "MNMKKLATLVSAVALSATVSANAMAKDTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQATKGEVVSHIASDNVLGGKIAGDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAAHKFNVLASQPADFDRIKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQTAGKSDVMVVGFDGTPDGEKAVNDGKLAATIAQLPDQIGAKGVETADKVLKGEKVQAKYPVDLKLVVKQ", - "protein_translation_length": 296, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rbsK" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9J6" - ], - [ - "gene_synonym", - "ECK3746" - ], - [ - "gene_synonym", - "EcoGene:EG10818" - ], - [ - "gene_synonym", - "JW3731" - ], - [ - "gene_synonym", - "ASAP:ABE-0012266" - ], - [ - "gene_synonym", - "b3752" - ], - [ - "gene_synonym", - "GI:16131620" - ], - [ - "gene_synonym", - "GeneID:948260" - ], - [ - "gene_synonym", - "NP_418208.1" - ] - ], - "dna_sequence": "ATGCAAAACGCAGGCAGCCTCGTTGTTCTTGGCAGCATTAATGCTGACCACATTCTTAATCTTCAATCTTTTCCTACTCCAGGCGAAACCGTAACCGGTAACCACTATCAGGTTGCATTTGGCGGCAAAGGCGCGAATCAGGCTGTGGCTGCTGGGCGTAGCGGTGCGAATATCGCGTTTATTGCCTGTACGGGTGATGACAGCATTGGTGAGAGCGTTCGCCAGCAGCTCGCCACTGATAACATTGATATTACTCCGGTCAGCGTGATCAAAGGCGAATCAACAGGTGTGGCGCTGATTTTTGTTAATGGCGAAGGTGAGAATGTCATCGGTATTCATGCCGGCGCTAATGCTGCCCTTTCCCCGGCGCTGGTGGAAGCGCAACGTGAGCGTATTGCCAACGCGTCAGCATTATTAATGCAGCTGGAATCACCACTCGAAAGTGTGATGGCAGCGGCGAAAATCGCCCATCAAAATAAGACTATCGTTGCGCTTAACCCGGCTCCGGCTCGCGAACTTCCTGACGAACTGCTGGCGCTGGTGGACATTATTACGCCAAACGAAACGGAAGCAGAAAAGCTCACCGGTATTCGTGTTGAAAATGATGAAGATGCAGCGAAGGCGGCGCAGGTACTGCATGAAAAAGGTATCCGTACTGTACTGATTACTTTAGGAAGTCGTGGTGTATGGGCTAGCGTGAATGGTGAAGGTCAGCGCGTTCCTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAACCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCGTACCGTGGCGTGAAGAGATCGACGCATTTTTAGACAGGCAGAGGTGA", - "dna_sequence_length": 930, - "functions": [ - "ribokinase" - ], - "id": "CDS_3701", - "location": [ - [ - "NC_000913", - 3937294, - "+", - 930 - ] - ], - "md5": "c20f73b11e9d91a6306bd28338615aa9", - "parent_gene": "", - "protein_md5": "41d734846aafe532ef6a0c049f152afd", - "protein_translation": "MQNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFLDRQR", - "protein_translation_length": 309, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rbsR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACQ0" - ], - [ - "gene_synonym", - "ECK3747" - ], - [ - "gene_synonym", - "EcoGene:EG10819" - ], - [ - "gene_synonym", - "JW3732" - ], - [ - "gene_synonym", - "b3753" - ], - [ - "gene_synonym", - "GI:16131621" - ], - [ - "gene_synonym", - "ASAP:ABE-0012271" - ], - [ - "gene_synonym", - "NP_418209.1" - ], - [ - "gene_synonym", - "GeneID:948266" - ] - ], - "dna_sequence": "TTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGAACGCGGTTCGGCTTAG", - "dna_sequence_length": 993, - "functions": [ - "transcriptional repressor of ribose metabolism" - ], - "id": "CDS_3702", - "location": [ - [ - "NC_000913", - 3938227, - "+", - 993 - ] - ], - "md5": "29d1f57b3d4ad31089a313f77bf2d3fb", - "parent_gene": "", - "protein_md5": "dc1e91f836209d60e254769b84a92a0f", - "protein_translation": "MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTHTIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLIDKGHTRIACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLLSHPLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELGELAIDVLIHRITQPTLQQQRLQLTPILMERGSA", - "protein_translation_length": 330, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yieO" - ], - [ - "gene_synonym", - "ECK3748" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31474" - ], - [ - "gene_synonym", - "ASAP:ABE-0012273" - ], - [ - "gene_synonym", - "JW3733" - ], - [ - "gene_synonym", - "GI:16131622" - ], - [ - "gene_synonym", - "b3754" - ], - [ - "gene_synonym", - "GeneID:948265" - ], - [ - "gene_synonym", - "EcoGene:EG11732" - ], - [ - "gene_synonym", - "hsrA" - ], - [ - "gene_synonym", - "NP_418210.1" - ] - ], - "dna_sequence": "ATGAGCGATAAAAAGAAGCGCAGTATGGCGGGTTTGCCGTGGATCGCGGCGATGGCCTTCTTCATGCAGGCACTTGATGCCACTATTCTTAATACCGCCTTACCCGCAATCGCTCATAGCCTTAATCGTTCTCCTCTCGCGATGCAATCAGCCATCATCAGTTATACGCTGACGGTGGCGATGCTTATTCCGGTAAGCGGATGGCTAGCCGATCGCTTCGGTACGCGTCGCATTTTTACCCTTGCCGTGAGTCTGTTCACATTGGGTTCTCTGGCCTGCGCACTTTCTAATTCGCTACCACAGCTGGTTGTCTTCCGGGTTATTCAGGGGATAGGCGGCGCAATGATGATGCCTGTTGCTCGGCTGGCCTTACTGCGCGCTTATCCTCGTAATGAACTTCTTCCAGTATTGAATTTTGTCGCCATGCCGGGTCTGGTGGGGCCAATTTTAGGCCCCGTTCTTGGCGGCGTGCTGGTCACCTGGGCAACCTGGCACTGGATATTTTTAATCAATATCCCCATAGGTATTGCGGGCCTTCTTTACGCGCGCAAACATATGCCCAATTTCACCACCGCACGACGCAGATTCGATATCACTGGCTTTTTGCTGTTTGGCCTCAGCCTTGTTCTCTTCTCAAGCGGAATAGAGCTATTCGGGGAAAAGATTGTCGCCAGCTGGATTGCCTTGACGGTAATTGTCACCAGCATCGGGTTACTGCTTCTCTATATTCTCCATGCACGACGCACGCCAAACCCATTAATTTCATTAGATTTATTTAAAACCCGCACTTTCTCGATCGGTATCGTAGGCAATATTGCAACCCGTCTGGGGACCGGCTGTGTACCGTTCCTTATGCCATTGATGTTACAGGTAGGATTTGGTTATCAGGCGTTTATTGCTGGCTGTATGATGGCACCGACAGCGTTAGGTTCCATTATTGCAAAATCGATGGTTACCCAAGTCTTACGTCGTCTGGGCTATCGCCATACGTTAGTGGGGATCACGGTGATTATTGGGCTAATGATCGCTCAGTTCTCTTTGCAATCACCAGCAATGGCTATATGGATGCTGATCTTGCCGTTGTTTATATTAGGGATGGCTATGTCGACGCAGTTTACCGCGATGAATACCATCACACTTGCCGATCTGACCGATGACAATGCCAGCAGCGGTAACAGTGTTCTGGCGGTCACGCAGCAACTGTCGATTAGTTTAGGCGTTGCTGTAAGTGCGGCCGTCCTTCGCGTTTATGAAGGAATGGAAGGCACAACGACTGTCGAACAATTCCACTATACGTTTATCACAATGGGCATTATTACTGTTGCTTCAGCAGCAATGTTCATGCTTCTGAAAACAACCGATGGTAATAATTTGATCAAAAGACAGCGTAAATCTAAGCCGAACCGCGTTCCATCAGAATCGGAGTAA", - "dna_sequence_length": 1428, - "functions": [ - "putative multidrug or homocysteine efflux system" - ], - "id": "CDS_3703", - "location": [ - [ - "NC_000913", - 3940612, - "-", - 1428 - ] - ], - "md5": "5daa1bf28c769984d0b1c24708f93eb1", - "parent_gene": "", - "protein_md5": "8e167920944e158f7908af8ca01732bf", - "protein_translation": "MSDKKKRSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRSPLAMQSAIISYTLTVAMLIPVSGWLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQLVVFRVIQGIGGAMMMPVARLALLRAYPRNELLPVLNFVAMPGLVGPILGPVLGGVLVTWATWHWIFLINIPIGIAGLLYARKHMPNFTTARRRFDITGFLLFGLSLVLFSSGIELFGEKIVASWIALTVIVTSIGLLLLYILHARRTPNPLISLDLFKTRTFSIGIVGNIATRLGTGCVPFLMPLMLQVGFGYQAFIAGCMMAPTALGSIIAKSMVTQVLRRLGYRHTLVGITVIIGLMIAQFSLQSPAMAIWMLILPLFILGMAMSTQFTAMNTITLADLTDDNASSGNSVLAVTQQLSISLGVAVSAAVLRVYEGMEGTTTVEQFHYTFITMGIITVASAAMFMLLKTTDGNNLIKRQRKSKPNRVPSESE", - "protein_translation_length": 475, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_026245.1" - ], - [ - "gene_synonym", - "ECK3749" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31475" - ], - [ - "gene_synonym", - "b3755" - ], - [ - "gene_synonym", - "ASAP:ABE-0012275" - ], - [ - "gene_synonym", - "JW5608" - ], - [ - "gene_synonym", - "GI:49176401" - ], - [ - "gene_synonym", - "EcoGene:EG11733" - ], - [ - "gene_synonym", - "GeneID:948263" - ], - [ - "gene_synonym", - "yieP" - ] - ], - "dna_sequence": "ATGCCTTTAAGCGCACAACAGTTAGCTGCACAGAAAAACCTTTCGTATGTTCTGGCTGAGAAGCTGGCGCAACGGATCTTAAAAGGTGAATATGAACCCGGCACCATTTTGCCCGGTGAGATTGAGCTGGGCGAGCAATTTGGAGTGAGTCGTACAGCGGTACGCGAAGCGGTCAAAACGTTAACGGCAAAAGGGATGGTTTTACCGCGACCGCGAATTGGTACTCGGGTCATGCCACAATCGAACTGGAATTTTCTTGATCAGGAATTGCTTACCTGGTGGATGACAGAAGAGAACTTTCATCAGGTCATCGATCACTTTCTGGTTATGCGTATCTGTCTGGAGCCGCAAGCCTGCCTACTGGCAGCAACGGTTGGCACCGCGGAACAGAAAGCGCATCTCAATACGTTAATGGCCGAAATGGCGGCATTAAAAGAGAACTTTCGCCGTGAACGCTGGATCGAAGTCGATATGGCCTGGCATGAGCATATCTATGAAATGAGCGCCAATCCGTTTTTGACCTCATTCGCCTCGCTATTCCATTCGGTTTATCACACTTACTTCACGTCAATTACCAGCGACACAGTGATAAAGCTGGATCTGCATCAGGCGATTGTCGATGCGATTATCCAAAGCGATGGCGACGCGGCATTTAAAGCTTGTCAGGCGCTGCTACGCTCACCTGATAAGTGA", - "dna_sequence_length": 693, - "functions": [ - "putative transcriptional regulator" - ], - "id": "CDS_3704", - "location": [ - [ - "NC_000913", - 3941327, - "-", - 693 - ] - ], - "md5": "3a7a1fe52591822c7aa8898829c5d857", - "parent_gene": "", - "protein_md5": "a5ae3776a8b5c14e52624dd28e568860", - "protein_translation": "MPLSAQQLAAQKNLSYVLAEKLAQRILKGEYEPGTILPGEIELGEQFGVSRTAVREAVKTLTAKGMVLPRPRIGTRVMPQSNWNFLDQELLTWWMTEENFHQVIDHFLVMRICLEPQACLLAATVGTAEQKAHLNTLMAEMAALKENFRRERWIEVDMAWHEHIYEMSANPFLTSFASLFHSVYHTYFTSITSDTVIKLDLHQAIVDAIIQSDGDAAFKACQALLRSPDK", - "protein_translation_length": 230, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hdfR" - ], - [ - "gene_synonym", - "yifD" - ], - [ - "gene_synonym", - "EcoGene:EG11449" - ], - [ - "gene_synonym", - "yifA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8R9" - ], - [ - "gene_synonym", - "ECK3756" - ], - [ - "gene_synonym", - "apeR?" - ], - [ - "gene_synonym", - "ASAP:ABE-0174109" - ], - [ - "gene_synonym", - "GeneID:2847698" - ], - [ - "gene_synonym", - "b4480" - ], - [ - "gene_synonym", - "GI:49176402" - ], - [ - "gene_synonym", - "YP_026246.1" - ], - [ - "gene_synonym", - "JW5607" - ] - ], - "dna_sequence": "GTGGATACGGAATTGTTAAAAACTTTCCTGGAAGTTAGCCGAACGCGTCACTTTGGTCGAGCGGCTGAATCGCTCTATCTGACCCAGTCAGCAGTGAGCTTTCGAATCAGACAACTGGAAAATCAACTGGGTGTGAACCTTTTCACCCGCCACAGAAACAATATCCGTTTAACCGCTGCCGGTGAAAAACTACTGCCTTATGCAGAAACGCTCATGAGCACCTGGCAGGCCGCCCGTAAGGAGGTGGCGCATACCTCACGACATAACGAGTTTTCTATCGGTGCCAGCGCCTCGTTGTGGGAATGTATGCTTAATCAGTGGCTGGGACGCTTGTATCAAAATCAGGATGCCCATACAGGCTTACAGTTCGAAGCGCGAATTGCCCAACGGCAGTCTCTGGTAAAACAGCTGCATGAACGCCAGCTTGATCTTCTTATTACCACTGAAGCGCCCAAAATGGACGAATTTAGTAGTCAGTTGCTGGGATATTTCACTTTAGCGCTTTATACCAGTGCCCCTTCAAAACTAAAGGGAGATCTTAATTATCTGCGACTTGAGTGGGGGCCAGATTTTCAACAGCATGAGGCAGGTTTGATCGGTGCTGACGAAGTGCCCATTCTGACAACCAGTTCTGCTGAACTGGCACAGCAACAGATTGCGATGCTTAATGGTTGCACCTGGCTACCCGTCAGCTGGGCGCGTAAAAAAGGCGGCCTGCATACCGTTGTCGATAGCACAACACTTTCACGGCCGCTTTATGCCATATGGCTGCAAAATAGCGATAAAAATGCGTTGATTCGCGATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAA", - "dna_sequence_length": 840, - "functions": [ - "flhDC operon transcriptional repressor" - ], - "id": "CDS_3705", - "location": [ - [ - "NC_000913", - 3947967, - "-", - 840 - ] - ], - "md5": "ae5b50f83fad1332f630c3bfc2c86df7", - "parent_gene": "", - "protein_md5": "389f3509dc3f8a27217aaa42c7c4cc36", - "protein_translation": "MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQLLGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLDEVY", - "protein_translation_length": 279, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yifE" - ], - [ - "gene_synonym", - "NP_418213.1" - ], - [ - "gene_synonym", - "GeneID:948274" - ], - [ - "gene_synonym", - "ECK3757" - ], - [ - "gene_synonym", - "EcoGene:EG11450" - ], - [ - "gene_synonym", - "ASAP:ABE-0012298" - ], - [ - "gene_synonym", - "JW3737" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADN2" - ], - [ - "gene_synonym", - "GI:16131624" - ], - [ - "gene_synonym", - "b3764" - ] - ], - "dna_sequence": "ATGGCGGAAAGCTTTACGACGACTAATCGATATTTCGACAATAAACATTATCCACGTGGATTCTCTCGTCATGGTGATTTCACCATCAAAGAGGCACAACTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTACCGAGGAAGAGAAACTCTTCGTAGCAGTATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAGTATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTACACCGATTCTGACGATTAA", - "dna_sequence_length": 339, - "functions": [ - "UPF0438 family protein" - ], - "id": "CDS_3706", - "location": [ - [ - "NC_000913", - 3948086, - "+", - 339 - ] - ], - "md5": "bb02cde15b63ccf78d9e2ab526d26f9d", - "parent_gene": "", - "protein_md5": "e9f588040b00f0a765a09edb29d4dc3c", - "protein_translation": "MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDLGKREPVTEEEKLFVAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVEGAEDYTDSDD", - "protein_translation_length": 112, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P22787" - ], - [ - "gene_synonym", - "JW3738" - ], - [ - "gene_synonym", - "yifB" - ], - [ - "gene_synonym", - "ECK3758" - ], - [ - "gene_synonym", - "GI:145698331" - ], - [ - "gene_synonym", - "ASAP:ABE-0012300" - ], - [ - "gene_synonym", - "GeneID:948282" - ], - [ - "gene_synonym", - "b3765" - ], - [ - "gene_synonym", - "EcoGene:EG11260" - ], - [ - "gene_synonym", - "NP_418214.2" - ] - ], - "dna_sequence": "ATGTCACTGTCAATTGTTCATACCCGCGCAGCCCTGGGAGTAAATGCGCCCCCGATCACTGTTGAGGTACATATCAGTAAAGGTCTACCCGGCTTAACGATGGTGGGCTTACCAGAAACAACGGTAAAAGAAGCTCGCGATCGCGTGCGCAGCGCCATTATCAATAGCGGATATGAATATCCGGCGAAAAAAATCACCATCAACCTGGCTCCAGCTGATCTGCCAAAAGAAGGGGGACGATATGATTTACCTATCGCCATTGCGTTGCTGGCGGCCTCAGAACAGCTTACAGCCAATAAGTTAGATGAATATGAATTAGTCGGAGAACTGGCGCTTACAGGCGCTCTGCGTGGCGTTCCCGGCGCAATCTCCAGTGCAACTGAAGCTATTAAGTCGGGCAGAAAAATTATCGTCGCGAAAGATAACGAAGATGAAGTGGGGCTAATTAACGGTGAAGGATGCCTGATAGCCGATCATCTGCAAGCTGTCTGTGCGTTTCTGGAAGGTAAGCACGCTCTCGAACGCCCGAAACCAACTGATGCAGTATCCCGGGCGCTACAACATGATCTCAGTGATGTTATCGGTCAGGAACAAGGAAAGCGAGGACTGGAAATTACCGCTGCTGGCGGGCACAACCTTTTACTGATTGGGCCGCCGGGAACAGGTAAAACAATGCTCGCCAGCCGTATTAATGGCCTGTTGCCAGATTTAAGCAATGAAGAGGCACTGGAGAGTGCTGCGATATTAAGTCTGGTAAATGCTGAATCAGTACAAAAACAATGGCGGCAGCGCCCGTTCCGCTCACCTCATCACAGTGCATCGTTAACTGCGATGGTAGGCGGTGGCGCAATTCCAGGGCCCGGTGAAATTTCGCTGGCGCATAACGGCGTGCTTTTTCTTGATGAGCTACCTGAATTTGAACGGCGTACACTGGATGCCTTGCGAGAGCCGATTGAATCCGGGCAGATCCATCTTTCACGCACACGAGCAAAAATAACCTATCCAGCCCGTTTCCAGCTTGTTGCGGCGATGAATCCCAGCCCTACCGGACATTATCAGGGAAACCATAACCGCTGCACGCCAGAACAGACATTACGTTATCTCAACCGGCTCTCGGGGCCCTTTCTCGACCGCTTCGATCTCTCACTGGAGATCCCATTACCACCCCCCGGCATTTTGAGTAAAACGGTAGTGCCGGGAGAAAGCAGCGCCACCGTTAAACAACGCGTAATGGCCGCCAGAGAGCGCCAATTTAAGCGGCAGAATAAACTGAATGCCTGGCTGGATAGTCCGGAAATACGCCAATTCTGCAAACTTGAGAGCGAAGATGCGATGTGGTTGGAAGGAACACTGATCCATCTGGGGTTATCGATTCGTGCCTGGCAGCGGTTATTGAAAGTTGCACGAACCATTGCTGATATTGATCAGTCTGACATTATCACACGTCAGCATTTGCAGGAGGCAGTTAGCTATCGAGCGATTGACCGTTTGCTCATCCATCTGCAGAAACTACTGACATAA", - "dna_sequence_length": 1521, - "functions": [ - "magnesium chelatase family protein and putative transcriptional regulator" - ], - "id": "CDS_3707", - "location": [ - [ - "NC_000913", - 3949969, - "-", - 1521 - ] - ], - "md5": "ec32bfbc41aee3de83eaf23a907068aa", - "parent_gene": "", - "protein_md5": "a05c0a7c588cb3e3f60c9530c5aa4e64", - "protein_translation": "MSLSIVHTRAALGVNAPPITVEVHISKGLPGLTMVGLPETTVKEARDRVRSAIINSGYEYPAKKITINLAPADLPKEGGRYDLPIAIALLAASEQLTANKLDEYELVGELALTGALRGVPGAISSATEAIKSGRKIIVAKDNEDEVGLINGEGCLIADHLQAVCAFLEGKHALERPKPTDAVSRALQHDLSDVIGQEQGKRGLEITAAGGHNLLLIGPPGTGKTMLASRINGLLPDLSNEEALESAAILSLVNAESVQKQWRQRPFRSPHHSASLTAMVGGGAIPGPGEISLAHNGVLFLDELPEFERRTLDALREPIESGQIHLSRTRAKITYPARFQLVAAMNPSPTGHYQGNHNRCTPEQTLRYLNRLSGPFLDRFDLSLEIPLPPPGILSKTVVPGESSATVKQRVMAARERQFKRQNKLNAWLDSPEIRQFCKLESEDAMWLEGTLIHLGLSIRAWQRLLKVARTIADIDQSDIITRQHLQEAVSYRAIDRLLIHLQKLLT", - "protein_translation_length": 506, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3739" - ], - [ - "gene_synonym", - "GI:16131626" - ], - [ - "gene_synonym", - "ECK3759" - ], - [ - "gene_synonym", - "ilvL" - ], - [ - "gene_synonym", - "ASAP:ABE-0012307" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P62522" - ], - [ - "gene_synonym", - "GeneID:948283" - ], - [ - "gene_synonym", - "EcoGene:EG11270" - ], - [ - "gene_synonym", - "b3766" - ], - [ - "gene_synonym", - "NP_418215.1" - ] - ], - "dna_sequence": "ATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAG", - "dna_sequence_length": 99, - "functions": [ - "ilvG operon leader peptide" - ], - "id": "CDS_3708", - "location": [ - [ - "NC_000913", - 3950322, - "+", - 99 - ] - ], - "md5": "bf86766fd4e0d3ac30ca88ec9104641f", - "parent_gene": "", - "protein_md5": "a4c4ff7d036b31794f438746bc460e3d", - "protein_translation": "MTALLRVISLVVISVVVIIIPPCGAALGRGKA", - "protein_translation_length": 32, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ilvX" - ], - [ - "gene_synonym", - "EcoGene:EG14474" - ], - [ - "gene_synonym", - "YP_002791259.1" - ], - [ - "gene_synonym", - "GI:226524760" - ], - [ - "gene_synonym", - "GeneID:7751639" - ], - [ - "gene_synonym", - "ECK4484" - ], - [ - "gene_synonym", - "b4669" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P619" - ] - ], - "dna_sequence": "ATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAA", - "dna_sequence_length": 51, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_3709", - "location": [ - [ - "NC_000913", - 3950507, - "+", - 51 - ] - ], - "md5": "44028cea3369f75213f9c47d7c93c9fe", - "parent_gene": "", - "protein_md5": "b4ff8754ddd5cb345c036c16fef620d6", - "protein_translation": "MNNSTKFCFSRFRTGN", - "protein_translation_length": 16, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3760" - ], - [ - "gene_synonym", - "b4488" - ], - [ - "gene_synonym", - "ASAP:ABE-0174552" - ], - [ - "gene_synonym", - "ASAP:ABE-0012309" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00892" - ], - [ - "gene_synonym", - "ilvO" - ], - [ - "gene_synonym", - "ASAP:ABE-0012311" - ], - [ - "gene_synonym", - "GeneID:2847699" - ], - [ - "gene_synonym", - "ilvG" - ], - [ - "gene_synonym", - "EcoGene:EG10498" - ], - [ - "gene_synonym", - "JW3741" - ], - [ - "gene_synonym", - "JW3740" - ] - ], - "dna_sequence": "ATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTATGCCGACATGAGCAGGGTGCGGCAATGGCGGCTATCGGTTATGCTCGTGCTACCGGCAAAACTGGCGTATGTATCGCCACGTCTGGTCCGGGCGCAACCAACCTGATAACCGGGCTTGCGGACGCACTGTTAGATTCCATCCCTGTTGTTGCCATCACCGGTCAAGTGTCCGCACCGTTTATCGGCACTGACGCATTTCAGGAAGTGGATGTCCTGGGATTGTCGTTAGCCTGTACCAAGCACAGCTTTCTGGTGCAGTCGCTGGAAGAGTTGCCGCGCATCATGGCTGAAGCATTCGACGTTGCCTGCTCAGGTCGTCCTGGTCCGGTTCTGGTCGATATCCCAAAAGATATCCAGTTAGCCAGCGGTGACCTGGAACCGTGGTTCACCACCGTTGAAAACGAAGTGACTTTCCCACATGCCGAAGTTGAGCAAGCGCGCCAGATGCTGGCAAAAGCGCAAAAACCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCACCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAACTTCGCGGTGCAGGAGTGTGACCTGCTGATCGCCGTGGGCGCACGTTTTGATGACCGGGTGACCGGCAAACTGAACACCTTCGCGCCACACGCCAGTGTTATCCATATGGATATCGACCCGGCAGAAATGAACAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGAGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGTTTAGGTACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCACAAGTCGCGCGACCGAACGATACCGTTGTCTGTATCTCCGGTGACGGCTCTTTCATGATGAATGTGCAAGAGCTGGGCACCGTAAAACGCAAGCAGTTACCGTTGAAAATCGTCTTACTCGATAACCAACGGTTAGGGATGGTTCGACAATGGCAGCAACTGTTTTTTCAGGAACGATACAGCGAAACCACCCTTACTGATAACCCCGATTTCCTCATGTTAGCCAGCGCCTTCGGCATCCATGGCCAACACATCACCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGAACGTCTGGCCGCTGGTGCCGCCTGGCGCCAGTAATTCAGAAATGTTGGAGAAATTATCATGA", - "dna_sequence_length": 1647, - "id": "CDS_3710", - "location": [ - [ - "NC_000913", - 3950560, - "+", - 984 - ], - [ - "NC_000913", - 3951542, - "+", - 663 - ] - ], - "md5": "681cbd30cd41706a782bc0a75984ed2e", - "parent_gene": "", - "protein_md5": "83a52502a4f22bc4a31e0c4bd3d8bf79", - "protein_translation": "MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLCRHEQGAAMAAIGYARATGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAPFIGTDAFQEVDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVACSGRPGPVLVDIPKDIQLASGDLEPWFTTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALREFLAATKMPATCTLKGLGAVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDRVTGKLNTFAPHASVIHMDIDPAEMNKLRQAHVALQGDLNALLPALQQPLNQ", - "protein_translation_length": 327, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948279" - ], - [ - "gene_synonym", - "GI:16131627" - ], - [ - "gene_synonym", - "EcoGene:EG10501" - ], - [ - "gene_synonym", - "ECK3761" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADG1" - ], - [ - "gene_synonym", - "NP_418217.1" - ], - [ - "gene_synonym", - "ilvM" - ], - [ - "gene_synonym", - "ASAP:ABE-0012313" - ], - [ - "gene_synonym", - "b3769" - ], - [ - "gene_synonym", - "JW3742" - ] - ], - "dna_sequence": "ATGATGCAACATCAGGTCAATGTATCGGCTCGCTTCAATCCAGAAACCTTAGAACGTGTTTTACGCGTGGTGCGTCATCGTGGTTTCCACGTCTGCTCAATGAATATGGCCGCCGCCAGCGATGCACAAAATATAAATATCGAATTGACCGTTGCCAGCCCACGGTCGGTCGACTTACTGTTTAGTCAGTTAAATAAACTGGTGGACGTCGCACACGTTGCCATCTGCCAGAGCACAACCACATCACAACAAATCCGCGCCTGA", - "dna_sequence_length": 264, - "functions": [ - "acetolactate synthase 2 small subunit" - ], - "id": "CDS_3711", - "location": [ - [ - "NC_000913", - 3952201, - "+", - 264 - ] - ], - "md5": "3b9ecde7ed6c08fa8b9156b568e01c66", - "parent_gene": "", - "protein_md5": "a1d7a82621861acf64f75e6389f719d2", - "protein_translation": "MMQHQVNVSARFNPETLERVLRVVRHRGFHVCSMNMAAASDAQNINIELTVASPRSVDLLFSQLNKLVDVAHVAICQSTTTSQQIRA", - "protein_translation_length": 87, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AB80" - ], - [ - "gene_synonym", - "EcoGene:EG10497" - ], - [ - "gene_synonym", - "ECK3762" - ], - [ - "gene_synonym", - "ASAP:ABE-0012316" - ], - [ - "gene_synonym", - "b3770" - ], - [ - "gene_synonym", - "YP_026247.1" - ], - [ - "gene_synonym", - "GI:49176403" - ], - [ - "gene_synonym", - "GeneID:948278" - ], - [ - "gene_synonym", - "ilvE" - ], - [ - "gene_synonym", - "JW5606" - ] - ], - "dna_sequence": "ATGACCACGAAGAAAGCTGATTACATTTGGTTCAATGGGGAGATGGTTCGCTGGGAAGACGCGAAGGTGCATGTGATGTCGCACGCGCTGCACTATGGCACTTCGGTTTTTGAAGGCATCCGTTGCTACGACTCGCACAAAGGACCGGTTGTATTCCGCCATCGTGAGCATATGCAGCGTCTGCATGACTCCGCCAAAATCTATCGCTTCCCGGTTTCGCAGAGCATTGATGAGCTGATGGAAGCTTGTCGTGACGTGATCCGCAAAAACAATCTCACCAGCGCCTATATCCGTCCGCTGATCTTCGTCGGTGATGTTGGCATGGGAGTAAACCCGCCAGCGGGATACTCAACCGACGTGATTATCGCTGCTTTCCCGTGGGGAGCGTATCTGGGCGCAGAAGCGCTGGAGCAGGGGATCGATGCGATGGTTTCCTCCTGGAACCGCGCAGCACCAAACACCATCCCGACGGCGGCAAAAGCCGGTGGTAACTACCTCTCTTCCCTGCTGGTGGGTAGCGAAGCGCGCCGCCACGGTTATCAGGAAGGTATCGCGCTGGATGTGAACGGTTATATCTCTGAAGGCGCAGGCGAAAACCTGTTTGAAGTGAAAGATGGTGTGCTGTTCACCCCACCGTTCACCTCCTCCGCGCTGCCGGGTATTACCCGTGATGCCATCATCAAACTGGCGAAAGAGCTGGGAATTGAAGTACGTGAGCAGGTGCTGTCGCGCGAATCCCTGTACCTGGCGGATGAAGTGTTTATGTCCGGTACGGCGGCAGAAATCACGCCAGTGCGCAGCGTAGACGGTATTCAGGTTGGCGAAGGCCGTTGTGGCCCGGTTACCAAACGCATTCAGCAAGCCTTCTTCGGCCTCTTCACTGGCGAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAA", - "dna_sequence_length": 930, - "functions": [ - "branched-chain amino acid aminotransferase" - ], - "id": "CDS_3712", - "location": [ - [ - "NC_000913", - 3952484, - "+", - 930 - ] - ], - "md5": "309a4d1b88c70e3effdfcbce8aedda80", - "parent_gene": "", - "protein_md5": "1d3a670d1bfad1175025fba33bbc4a4c", - "protein_translation": "MTTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVNQ", - "protein_translation_length": 309, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10496" - ], - [ - "gene_synonym", - "ECK3763" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05791" - ], - [ - "gene_synonym", - "YP_026248.1" - ], - [ - "gene_synonym", - "GI:49176404" - ], - [ - "gene_synonym", - "b3771" - ], - [ - "gene_synonym", - "GeneID:948277" - ], - [ - "gene_synonym", - "ilvD" - ], - [ - "gene_synonym", - "ASAP:ABE-0012318" - ], - [ - "gene_synonym", - "JW5605" - ] - ], - "dna_sequence": "ATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGTGGCGCGCCACCGGAATGACCGACGCCGATTTCGGTAAGCCGATTATCGCGGTTGTGAACTCGTTCACCCAATTTGTACCGGGTCACGTCCATCTGCGCGATCTCGGTAAACTGGTCGCCGAACAAATTGAAGCGGCTGGCGGCGTTGCCAAAGAGTTCAACACCATTGCGGTGGATGATGGGATTGCCATGGGCCACGGGGGGATGCTTTATTCACTGCCATCTCGCGAACTGATCGCTGATTCCGTTGAGTATATGGTCAACGCCCACTGCGCCGACGCCATGGTCTGCATCTCTAACTGCGACAAAATCACCCCGGGGATGCTGATGGCTTCCCTGCGCCTGAATATTCCGGTGATCTTTGTTTCCGGCGGCCCGATGGAGGCCGGGAAAACCAAACTTTCCGATCAGATCATCAAGCTCGATCTGGTTGATGCGATGATCCAGGGCGCAGACCCGAAAGTATCTGACTCCCAGAGCGATCAGGTTGAACGTTCCGCGTGTCCGACCTGCGGTTCCTGCTCCGGGATGTTTACCGCTAACTCAATGAACTGCCTGACCGAAGCGCTGGGCCTGTCGCAGCCGGGCAACGGCTCGCTGCTGGCAACCCACGCCGACCGTAAGCAGCTGTTCCTTAATGCTGGTAAACGCATTGTTGAATTGACCAAACGTTATTACGAGCAAAACGACGAAAGTGCACTGCCGCGTAATATCGCCAGTAAGGCGGCGTTTGAAAACGCCATGACGCTGGATATCGCGATGGGTGGATCGACTAACACCGTACTTCACCTGCTGGCGGCGGCGCAGGAAGCGGAAATCGACTTCACCATGAGTGATATCGATAAGCTTTCCCGCAAGGTTCCACAGCTGTGTAAAGTTGCGCCGAGCACCCAGAAATACCATATGGAAGATGTTCACCGTGCTGGTGGTGTTATCGGTATTCTCGGCGAACTGGATCGCGCGGGGTTACTGAACCGTGATGTGAAAAACGTACTTGGCCTGACGTTGCCGCAAACGCTGGAACAATACGACGTTATGCTGACCCAGGATGACGCGGTAAAAAATATGTTCCGCGCAGGTCCTGCAGGCATTCGTACCACACAGGCATTCTCGCAAGATTGCCGTTGGGATACGCTGGACGACGATCGCGCCAATGGCTGTATCCGCTCGCTGGAACACGCCTACAGCAAAGACGGCGGCCTGGCGGTGCTCTACGGTAACTTTGCGGAAAACGGCTGCATCGTGAAAACGGCAGGCGTCGATGACAGCATCCTCAAATTCACCGGCCCGGCGAAAGTGTACGAAAGCCAGGACGATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGATGGTGACCTGATCGCTATCGACATCCCGAACCGTGGCATTCAGTTACAGGTAAGCGATGCCGAACTGGCGGCGCGTCGTGAAGCGCAGGACGCTCGAGGTGACAAAGCCTGGACGCCGAAAAATCGTGAACGTCAGGTCTCCTTTGCCCTGCGTGCTTATGCCAGCCTGGCAACCAGCGCCGACAAAGGCGCGGTGCGCGATAAATCGAAACTGGGGGGTTAA", - "dna_sequence_length": 1851, - "functions": [ - "dihydroxyacid dehydratase" - ], - "id": "CDS_3713", - "location": [ - [ - "NC_000913", - 3953478, - "+", - 1851 - ] - ], - "md5": "6a64ff8f4c4671507946170b651e1d5c", - "parent_gene": "", - "protein_md5": "84a0a843d8345d29dbe7cf03877f5f44", - "protein_translation": "MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQIIKLDLVDAMIQGADPKVSDSQSDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKQLFLNAGKRIVELTKRYYEQNDESALPRNIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVIGILGELDRAGLLNRDVKNVLGLTLPQTLEQYDVMLTQDDAVKNMFRAGPAGIRTTQAFSQDCRWDTLDDDRANGCIRSLEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTGPAKVYESQDDAVEAILGGKVVAGDVVVIRYEGPKGGPGMQEMLYPTSFLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAASGGSIGLIEDGDLIAIDIPNRGIQLQVSDAELAARREAQDARGDKAWTPKNRERQVSFALRAYASLATSADKGAVRDKSKLGG", - "protein_translation_length": 616, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3764" - ], - [ - "gene_synonym", - "EcoGene:EG10493" - ], - [ - "gene_synonym", - "NP_418220.1" - ], - [ - "gene_synonym", - "GeneID:948287" - ], - [ - "gene_synonym", - "GI:16131630" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04968" - ], - [ - "gene_synonym", - "JW3745" - ], - [ - "gene_synonym", - "b3772" - ], - [ - "gene_synonym", - "ASAP:ABE-0012321" - ], - [ - "gene_synonym", - "ilvA" - ] - ], - "dna_sequence": "ATGGCTGACTCGCAACCCCTGTCCGGTGCTCCGGAAGGTGCCGAATATTTAAGAGCAGTGCTGCGCGCGCCGGTTTACGAGGCGGCGCAGGTTACGCCGCTACAAAAAATGGAAAAACTGTCGTCGCGTCTTGATAACGTCATTCTGGTGAAGCGCGAAGATCGCCAGCCAGTGCACAGCTTTAAGCTGCGCGGCGCATACGCCATGATGGCGGGCCTGACGGAAGAACAGAAAGCGCACGGCGTGATCACTGCTTCTGCGGGTAACCACGCGCAGGGCGTCGCGTTTTCTTCTGCGCGGTTAGGCGTGAAGGCCCTGATCGTTATGCCAACCGCCACCGCCGACATCAAAGTCGACGCGGTGCGCGGCTTCGGCGGCGAAGTGCTGCTCCACGGCGCGAACTTTGATGAAGCGAAAGCCAAAGCGATCGAACTGTCACAGCAGCAGGGGTTCACCTGGGTGCCGCCGTTCGACCATCCGATGGTGATTGCCGGGCAAGGCACGCTGGCGCTGGAACTGCTCCAGCAGGACGCCCATCTCGACCGCGTATTTGTGCCAGTCGGCGGCGGCGGTCTGGCTGCTGGCGTGGCGGTGCTGATCAAACAACTGATGCCGCAAATCAAAGTGATCGCCGTAGAAGCGGAAGACTCCGCCTGCCTGAAAGCAGCGCTGGATGCGGGTCATCCGGTTGATCTGCCGCGCGTAGGGCTATTTGCTGAAGGCGTAGCGGTAAAACGCATCGGTGACGAAACCTTCCGTTTATGCCAGGAGTATCTCGACGACATCATCACCGTCGATAGCGATGCGATCTGTGCGGCGATGAAGGATTTATTCGAAGATGTGCGCGCGGTGGCGGAACCCTCTGGCGCGCTGGCGCTGGCGGGAATGAAAAAATATATCGCCCTGCACAACATTCGCGGCGAACGGCTGGCGCATATTCTTTCCGGTGCCAACGTGAACTTCCACGGCCTGCGCTACGTCTCAGAACGCTGCGAACTGGGCGAACAGCGTGAAGCGTTGTTGGCGGTGACCATTCCGGAAGAAAAAGGCAGCTTCCTCAAATTCTGCCAACTGCTTGGCGGGCGTTCGGTCACCGAGTTCAACTACCGTTTTGCCGATGCCAAAAACGCCTGCATCTTTGTCGGTGTGCGCCTGAGCCGCGGCCTCGAAGAGCGCAAAGAAATTTTGCAGATGCTCAACGACGGCGGCTACAGCGTGGTTGATCTCTCCGACGACGAAATGGCGAAGCTACACGTGCGCTATATGGTCGGCGGACGTCCATCGCATCCGTTGCAGGAACGCCTCTACAGCTTCGAATTCCCGGAATCACCGGGCGCGCTGCTGCGCTTCCTCAACACGCTGGGTACGTACTGGAACATTTCTTTGTTCCACTATCGCAGCCATGGCACCGACTACGGGCGCGTACTGGCGGCGTTCGAACTTGGCGACCATGAACCGGATTTCGAAACCCGGCTGAATGAGCTGGGCTACGATTGCCACGACGAAACCAATAACCCGGCGTTCAGGTTCTTTTTGGCGGGTTAG", 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- [ - "gene_synonym", - "JW3746" - ], - [ - "gene_synonym", - "ilvY" - ], - [ - "gene_synonym", - "EcoGene:EG10503" - ], - [ - "gene_synonym", - "GeneID:948284" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05827" - ], - [ - "gene_synonym", - "GI:16131631" - ], - [ - "gene_synonym", - "ASAP:ABE-0012323" - ], - [ - "gene_synonym", - "b3773" - ], - [ - "gene_synonym", - "NP_418221.1" - ] - ], - "dna_sequence": "GTGGATTTACGCGATCTGAAAACCTTCCTGCATCTGGCGGAAAGCCGCCATTTTGGCCGCAGCGCGCGGGCGATGCACGTTAGCCCATCCACGCTCTCACGGCAGATTCAGCGCCTGGAAGAAGATCTCGGTCAGCCGCTGTTTGTGCGCGATAACCGCACGGTGACGCTGACTGAAGCGGGCGAAGAGCTGCGCGTTTTCGCCCAGCAAACGCTGTTGCAGTATCAGCAGTTGCGCCACACCATCGATCAGCAAGGGCCGTCGCTCTCTGGCGAATTACATATCTTCTGCTCGGTGACCGCTGCCTACAGCCATCTGCCGCCGATTCTGGATCGCTTCCGCGCGGAACACCCGTCGGTGGAGATTAAACTTACTACTGGTGATGCGGCAGATGCGATGGAAAAGGTGGTCACTGGTGAAGCGGATCTGGCGATTGCGGGTAAACCGGAAACCTTGCCCGGCGCAGTGGCGTTTTCGATGCTGGAGAATCTGGCAGTAGTGCTGATTGCCCCCGCGCTGCCCTGCCCGGTGCGTAATCAGGTGTCGGTAGAGAAGCCGGACTGGTCAACGGTGCCGTTTATTATGGCCGATCAGGGGCCGGTACGCCGCCGCATTGAACTGTGGTTTCGACGCAATAAAATCAGTAACCCGATGATTTACGCCACGGTTGGCGGGCATGAAGCGATGGTATCGATGGTGGCACTCGGCTGTGGCGTGGCATTGTTGCCGGAAGTGGTGCTGGAAAACAGCCCCGAACCGGTGCGTAACCGCGTGATGATTTTAGAGCGCAGCGATGAGAAAACGCCGTTTGAGCTGGGCGTGTGTGCGCAGAAAAAGCGGCTACATGAGCCGCTAATTGAGGCATTCTGGAAGATTTTGCCGAACCACAAATGA", - "dna_sequence_length": 894, - "functions": [ - "transcriptional activator of ilvC", - "autorepressor" - ], - "id": "CDS_3715", - "location": [ - [ - "NC_000913", - 3957820, - "-", - 894 - ] - ], - "md5": "94cf9f51f721ecd98edd368b061d87f8", - "parent_gene": "", - "protein_md5": "06ca4eea8ba87c5d3718a5b9e34adfe7", - "protein_translation": "MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLGQPLFVRDNRTVTLTEAGEELRVFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAAYSHLPPILDRFRAEHPSVEIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSMLENLAVVLIAPALPCPVRNQVSVEKPDWSTVPFIMADQGPVRRRIELWFRRNKISNPMIYATVGGHEAMVSMVALGCGVALLPEVVLENSPEPVRNRVMILERSDEKTPFELGVCAQKKRLHEPLIEAFWKILPNHK", - "protein_translation_length": 297, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3766" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P05793" - ], - [ - "gene_synonym", - "ASAP:ABE-0012331" - ], - [ - "gene_synonym", - "EcoGene:EG10495" - ], - [ - "gene_synonym", - "GeneID:948286" - ], - [ - "gene_synonym", - "GI:16131632" - ], - [ - "gene_synonym", - "JW3747" - ], - [ - "gene_synonym", - "b3774" - ], - [ - "gene_synonym", - "NP_418222.1" - ], - [ - "gene_synonym", - "ilvC" - ] - ], - "dna_sequence": "ATGGCTAACTACTTCAATACACTGAATCTGCGCCAGCAGCTGGCACAGCTGGGCAAATGTCGCTTTATGGGCCGCGATGAATTCGCCGATGGCGCGAGCTACCTTCAGGGTAAAAAAGTAGTCATCGTCGGCTGTGGCGCACAGGGTCTGAACCAGGGCCTGAACATGCGTGATTCTGGTCTCGATATCTCCTACGCTCTGCGTAAAGAAGCGATTGCCGAGAAGCGCGCGTCCTGGCGTAAAGCGACCGAAAATGGTTTTAAAGTGGGTACTTACGAAGAACTGATCCCACAGGCGGATCTGGTGATTAACCTGACGCCGGACAAGCAGCACTCTGATGTAGTGCGCACCGTACAGCCACTGATGAAAGACGGCGCGGCGCTGGGCTACTCGCACGGTTTCAACATCGTCGAAGTGGGCGAGCAGATCCGTAAAGATATCACCGTAGTGATGGTTGCGCCGAAATGCCCAGGCACCGAAGTGCGTGAAGAGTACAAACGTGGGTTCGGCGTACCGACGCTGATTGCCGTTCACCCGGAAAACGATCCGAAAGGCGAAGGCATGGCGATTGCCAAAGCCTGGGCGGCTGCAACCGGTGGTCACCGTGCGGGTGTGCTGGAATCGTCCTTCGTTGCGGAAGTGAAATCTGACCTGATGGGCGAGCAAACCATCCTGTGCGGTATGTTGCAGGCTGGCTCTCTGCTGTGCTTCGACAAGCTGGTGGAAGAAGGTACCGATCCAGCATACGCAGAAAAACTGATTCAGTTCGGTTGGGAAACCATCACCGAAGCACTGAAACAGGGCGGCATCACCCTGATGATGGACCGTCTCTCTAACCCGGCGAAACTGCGTGCTTATGCGCTTTCTGAACAGCTGAAAGAGATCATGGCACCCCTGTTCCAGAAACATATGGACGACATCATCTCCGGCGAATTCTCTTCCGGTATGATGGCGGACTGGGCCAACGATGATAAGAAACTGCTGACCTGGCGTGAAGAGACCGGCAAAACCGCGTTTGAAACCGCGCCGCAGTATGAAGGCAAAATCGGCGAGCAGGAGTACTTCGATAAAGGCGTACTGATGATTGCGATGGTGAAAGCGGGCGTTGAACTGGCGTTCGAAACCATGGTCGATTCCGGCATCATTGAAGAGTCTGCATATTATGAATCACTGCACGAGCTGCCGCTGATTGCCAACACCATCGCCCGTAAGCGTCTGTACGAAATGAACGTGGTTATCTCTGATACCGCTGAGTACGGTAACTATCTGTTCTCTTACGCTTGTGTGCCGTTGCTGAAACCGTTTATGGCAGAGCTGCAACCGGGCGACCTGGGTAAAGCTATTCCGGAAGGCGCGGTAGATAACGGGCAACTGCGTGATGTGAACGAAGCGATTCGCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAA", - "dna_sequence_length": 1476, - "functions": [ - "ketol-acid reductoisomerase, NAD(P)-binding" - ], - "id": "CDS_3716", - "location": [ - [ - "NC_000913", - 3957970, - "+", - 1476 - ] - ], - "md5": "0b7feaded0ceb0ee1dc0afff4de16a5e", - "parent_gene": "", - "protein_md5": "c9a3ff3d57da59c58e00846dfb3dcc5c", - "protein_translation": "MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDRLSNPAKLRAYALSEQLKEIMAPLFQKHMDDIISGEFSSGMMADWANDDKKLLTWREETGKTAFETAPQYEGKIGEQEYFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYGNYLFSYACVPLLKPFMAELQPGDLGKAIPEGAVDNGQLRDVNEAIRSHAIEQVGKKLRGYMTDMKRIAVAG", - "protein_translation_length": 491, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3767" - ], - [ - "gene_synonym", - "NP_418223.1" - ], - [ - "gene_synonym", - "EcoGene:EG12352" - ], - [ - "gene_synonym", - "GeneID:948285" - ], - [ - "gene_synonym", - "JW3748" - ], - [ - "gene_synonym", - "GI:16131633" - ], - [ - "gene_synonym", - "ASAP:ABE-0012334" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9L5" - ], - [ - "gene_synonym", - "parvA" - ], - [ - "gene_synonym", - "ppiC" - ], - [ - "gene_synonym", - "b3775" - ] - ], - "dna_sequence": "ATGGCAAAAACAGCAGCAGCACTGCATATCCTTGTAAAAGAAGAGAAACTGGCTCTGGATCTTCTCGAGCAGATTAAGAACGGGGCCGATTTCGGCAAGCTGGCGAAGAAACACTCCATTTGCCCATCAGGCAAACGCGGCGGTGATTTAGGTGAATTCCGCCAGGGTCAGATGGTTCCGGCGTTCGATAAAGTGGTTTTCTCTTGTCCGGTACTGGAGCCGACCGGCCCGCTGCACACCCAGTTCGGATATCACATCATTAAGGTGCTGTACCGCAACTAA", - "dna_sequence_length": 282, - "functions": [ - "peptidyl-prolyl cis-trans isomerase C (rotamase C)" - ], - "id": "CDS_3717", - "location": [ - [ - "NC_000913", - 3959813, - "-", - 282 - ] - ], - "md5": "a9bf5b45cb9c2117959fb1494fbf337f", - "parent_gene": "", - "protein_md5": "f9de714674d1b64ac6831b260f357baa", - "protein_translation": "MAKTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKVLYRN", - "protein_translation_length": 93, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0012340" - ], - [ - "gene_synonym", - "yifN" - ], - [ - "gene_synonym", - "yifO" - ], - [ - "gene_synonym", - "ECK3768" - ], - [ - "gene_synonym", - "JW3749" - ], - [ - "gene_synonym", - "ASAP:ABE-0012338" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P56259" - ], - [ - "gene_synonym", - "EcoGene:EG14339" - ], - [ - "gene_synonym", - "GeneID:2847676" - ], - [ - "gene_synonym", - "b3777" - ] - ], - "dna_sequence": "GTGGCGATTAATTTCAGCCCTAAGGTTGGTGAAATACTGGAATGCAACTTTGGTAACTATCCTGTTAGCCAAAATGGACCGTTCAGCACGACGTATTACGATGGCCGCATTCCTCCTGAAATGATAAAAAACAGGTTAGTTGTCGTGCTCAACGGAAAAATTAATGGCAACGCATGCATCGTCGTTCCATTATCAACCACTCGCGACCCAGACAAGTTAAAACGTGGAATGCATGTTGAAATAGCCAGTAATGTTATCAATGACCTGCAATTCTTTGATCAGCAGATTCGTTGGGCCAAAGCCGACCTGGTACAACAAGTCAGTCGAAACAGATTAAACAGAGCAAGGACTTACAGAGGGTATCTTAATCAATGTTTGCCACATGAGTTGGTTGCAGACATACAGAGGGCGGTCATCAAGTCAATCAATGCCATATCGCTCATAAATTGA", - "dna_sequence_length": 450, - "id": "CDS_3718", - "location": [ - [ - "NC_000913", - 3960460, - "-", - 207 - ], - [ - "NC_000913", - 3960254, - "-", - 243 - ] - ], - "md5": "a80fdd62e350772f92ca485affadf209", - "parent_gene": "", - "protein_md5": "65918b95b9cb1060104578ceb6f12550", - "protein_translation": "VAINFSPKVGEILECNFGNYPVSQNGPFSTTYYDGRIPPEMIKNRLVVVLNGKINGNACIVVPLSTTRDPDKLKRGMHVEIASNVINDLQFFDQQIRWAKADLVQQVSRNRLNRARTYRGYLNQCLPHELVADIQRAVIKSINAISLIN", - "protein_translation_length": 149, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3770" - ], - [ - "gene_synonym", - "rep" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09980" - ], - [ - "gene_synonym", - "ASAP:ABE-0012344" - ], - [ - "gene_synonym", - "b3778" - ], - [ - "gene_synonym", - "GI:49176407" - ], - [ - "gene_synonym", - "mbrA" - ], - [ - "gene_synonym", - "mmrA?" - ], - [ - "gene_synonym", - "GeneID:948292" - ], - [ - "gene_synonym", - "EcoGene:EG10837" - ], - [ - "gene_synonym", - "dasC" - ], - [ - "gene_synonym", - "YP_026251.1" - ], - [ - "gene_synonym", - "JW5604" - ] - ], - "dna_sequence": "ATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGCTGGCGGGCGCGGGTTCCGGTAAAACTCGTGTTATCACCAATAAAATCGCCCATCTGATCCGCGGTTGCGGTTATCAGGCGCGGCACATTGCGGCGGTGACCTTTACTAATAAAGCAGCGCGCGAGATGAAAGAGCGTGTAGGGCAGACGCTGGGGCGCAAAGAGGCGCGTGGGCTGATGATCTCCACTTTCCATACGTTGGGGCTGGATATCATCAAACGCGAGTATGCGGCGCTTGGGATGAAAGCGAACTTCTCGTTGTTTGACGATACCGATCAGCTTGCTTTGCTTAAAGAGTTGACCGAGGGGCTGATTGAAGATGACAAAGTTCTCCTGCAACAACTGATTTCGACCATCTCTAACTGGAAGAATGATCTCAAAACACCGTCCCAGGCGGCAGCAAGTGCGATTGGCGAGCGGGACCGTATTTTTGCCCATTGTTATGGGCTGTATGATGCACACCTGAAAGCCTGTAACGTTCTCGACTTCGATGATCTGATTTTATTGCCGACGTTGCTGCTGCAACGCAATGAAGAAGTCCGCAAGCGCTGGCAGAACAAAATTCGCTATCTGCTGGTGGATGAGTATCAGGACACCAACACCAGCCAGTATGAGCTGGTGAAACTGCTGGTGGGCAGCCGCGCGCGCTTTACCGTGGTGGGTGACGATGACCAGTCGATCTACTCCTGGCGCGGTGCACGTCCGCAAAACCTGGTGCTGCTGAGTCAGGATTTTCCGGCGCTGAAGGTGATTAAGCTTGAGCAGAACTATCGCTCTTCCGGGCGTATTCTGAAAGCGGCGAACATCCTGATCGCCAATAACCCGCACGTCTTTGAAAAGCGTCTGTTCTCCGAACTGGGTTATGGCGCGGAGCTAAAAGTATTAAGCGCGAATAACGAAGAACATGAGGCTGAGCGCGTTACTGGCGAGCTGATCGCCCATCACTTCGTCAATAAAACGCAGTACAAAGATTACGCCATTCTTTATCGCGGTAACCATCAGTCGCGGGTGTTTGAAAAATTCCTGATGCAAAACCGCATCCCGTACAAAATATCTGGTGGTACGTCGTTTTTCTCTCGTCCTGAAATCAAGGACTTGCTGGCTTATCTGCGCGTGCTGACTAACCCGGACGATGACAGCGCATTTCTGCGTATCGTTAACACGCCGAAGCGAGAGATTGGCCCGGCTACGCTGAAAAAGCTGGGTGAGTGGGCGATGACGCGCAATAAAAGCATGTTTACCGCCAGCTTTGATATGGGCCTGAGTCAGACGCTTAGCGGACGTGGTTATGAAGCATTGACCCGCTTCACTCACTGGTTGGCAGAAATCCAGCGTCTGGCGGAGCGGGAGCCGATTGCCGCGGTGCGTGATCTGATCCATGGCATGGATTATGAATCCTGGCTGTACGAAACATCGCCCAGCCCGAAAGCCGCCGAAATGCGCATGAAGAACGTCAACCAACTGTTTAGCTGGATGACGGAGATGCTGGAAGGCAGTGAACTGGATGAGCCGATGACGCTCACCCAGGTGGTGACGCGCTTTACTTTGCGCGACATGATGGAGCGTGGTGAGAGTGAAGAAGAGCTGGATCAGGTGCAACTGATGACTCTCCACGCGTCGAAAGGGCTGGAGTTTCCTTATGTCTACATGGTCGGTATGGAAGAAGGGTTTTTGCCGCACCAGAGCAGCATCGATGAAGATAATATCGATGAGGAGCGGCGGCTGGCCTATGTCGGCATTACCCGCGCCCAGAAGGAATTGACCTTTACGCTGTGTAAAGAACGCCGTCAGTACGGCGAACTGGTGCGCCCGGAGCCGAGCCGCTTTTTGCTGGAGCTGCCGCAGGATGATCTGATTTGGGAACAGGAGCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAA", - "dna_sequence_length": 2022, - "functions": [ - "DNA helicase and single-stranded DNA-dependent ATPase" - ], - "id": "CDS_3719", - "location": [ - [ - "NC_000913", - 3960677, - "+", - 2022 - ] - ], - "md5": "67805296875cd59476705d009ae78593", - "parent_gene": "", - "protein_md5": "d2145fa047ad8790ce7e449216c33243", - "protein_translation": "MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALLKELTEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAASAIGERDRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQRNEEVRKRWQNKIRYLLVDEYQDTNTSQYELVKLLVGSRARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQNYRSSGRILKAANILIANNPHVFEKRLFSELGYGAELKVLSANNEEHEAERVTGELIAHHFVNKTQYKDYAILYRGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLKKLGEWAMTRNKSMFTASFDMGLSQTLSGRGYEALTRFTHWLAEIQRLAEREPIAAVRDLIHGMDYESWLYETSPSPKAAEMRMKNVNQLFSWMTEMLEGSELDEPMTLTQVVTRFTLRDMMERGESEEELDQVQLMTLHASKGLEFPYVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGITRAQKELTFTLCKERRQYGELVRPEPSRFLLELPQDDLIWEQERKVVSAEERMQKGQSHLANLKAMMAAKRGK", - "protein_translation_length": 673, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_026252.1" - ], - [ - "gene_synonym", - "ECK3771" - ], - [ - "gene_synonym", - "EcoGene:EG10413" - ], - [ - "gene_synonym", - "GeneID:948291" - ], - [ - "gene_synonym", - "ASAP:ABE-0012347" - ], - [ - "gene_synonym", - "b3779" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25552" - ], - [ - "gene_synonym", - "gppA" - ], - [ - "gene_synonym", - "JW5603" - ], - [ - "gene_synonym", - "gpp" - ], - [ - "gene_synonym", - "GI:49176408" - ] - ], - "dna_sequence": "ATGGGTTCCACCTCGTCGCTGTATGCAGCCATTGATCTCGGTTCGAATAGTTTTCATATGCTGGTTGTGCGCGAGGTGGCTGGAAGCATCCAGACGCTGACGCGAATAAAACGCAAAGTGCGTCTGGCTGCTGGCCTGAATAGCGAAAATGCCCTCTCCAATGAAGCAATGGAGCGCGGTTGGCAATGTTTGCGCCTGTTTGCTGAACGTCTGCAAGATATTCCTCCCTCGCAAATTCGCGTTGTCGCTACGGCGACGTTACGCCTTGCCGTCAATGCGGGTGATTTTATTGCCAAAGCGCAGGAAATTCTCGGTTGTCCGGTACAGGTGATCAGCGGTGAAGAGGAAGCACGTCTGATTTATCAGGGCGTTGCTCACACCACTGGTGGTGCCGATCAGCGCCTGGTGGTGGATATAGGCGGAGCCAGTACTGAACTGGTAACCGGCACGGGTGCACAAACCACCTCGTTGTTCAGCCTGTCGATGGGCTGCGTCACCTGGCTGGAACGCTATTTTGCCGATCGTAATCTGGGGCAGGAAAATTTTGATGCTGCAGAAAAAGCGGCACGCGAAGTGTTACGTCCGGTTGCCGATGAATTACGGTATCACGGCTGGAAAGTGTGCGTTGGTGCTTCCGGCACCGTGCAGGCGTTACAGGAAATCATGATGGCACAGGGGATGGATGAACGCATTACCCTGGAAAAGTTGCAGCAATTGAAACAGCGAGCCATTCATTGCGGTCGGCTGGAGGAACTGGAGATTGACGGGCTGACGCTGGAACGTGCGTTAGTGTTCCCGAGTGGTCTGGCGATCCTGATCGCCATTTTTACCGAACTGAATATTCAGTGTATGACCCTGGCGGGCGGTGCGCTGCGTGAAGGCCTGGTCTACGGCATGTTGCATCTGGCCGTCGAGCAGGATATTCGCAGCCGTACGCTGCGTAATATTCAACGCCGCTTTATGATCGATATTGATCAGGCACAGCGCGTAGCCAAAGTTGCGGCTAACTTCTTCGATCAGGTGGAAAACGAATGGCATCTTGAAGCAATAAGCCGCGATTTGCTCATCAGCGCCTGTCAGCTTCATGAAATCGGCCTGAGCGTTGACTTCAAACAAGCGCCGCAACACGCTGCTTATCTGGTGCGTAATCTGGATCTTCCCGGTTTTACCCCCGCACAGAAAAAATTGCTGGCGACGCTACTGCTCAACCAGACTAATCCGGTCGATCTCTCATCGCTGCATCAGCAAAATGCCGTACCGCCGCGCGTCGCAGAACAACTCTGCCGTTTACTACGCCTGGCCATCATTTTTGCCAGCCGTCGCCGTGACGATCTCGTGCCAGAGATGACATTACAGGCTAACCATGAACTGTTGACCTTGACGCTTCCGCAAGGTTGGCTAACCCAACATCCGCTGGGTAAAGAGATTATTGCTCAGGAAAGCCAGTGGCAGAGCTATGTCCACTGGCCGCTGGAAGTGCATTAA", 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"gene_synonym", - "ECK3772" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8J8" - ], - [ - "gene_synonym", - "ASAP:ABE-0012351" - ], - [ - "gene_synonym", - "EcoGene:EG10844" - ], - [ - "gene_synonym", - "GI:16131636" - ], - [ - "gene_synonym", - "mmrA?" - ], - [ - "gene_synonym", - "GeneID:948290" - ], - [ - "gene_synonym", - "JW3753" - ], - [ - "gene_synonym", - "b3780" - ] - ], - "dna_sequence": "ATGAGCAAAACACATTTAACAGAACAGAAGTTTTCCGACTTCGCCCTGCATCCGAAGGTTGTAGAAGCCCTTGAAAAAAAAGGGTTTCATAACTGTACGCCCATTCAGGCACTGGCCCTTCCGCTGACGCTGGCGGGTCGTGACGTAGCCGGGCAGGCGCAAACCGGTACCGGGAAAACGATGGCGTTTCTTACGTCAACGTTTCATTATCTTCTCTCTCATCCTGCGATTGCCGATCGCAAGGTGAATCAGCCGCGTGCCTTAATTATGGCACCGACGCGTGAACTTGCCGTGCAGATCCATGCCGACGCAGAACCGCTGGCGGAAGCTACTGGCCTGAAGCTGGGTCTGGCTTACGGTGGTGATGGCTACGACAAACAGCTGAAAGTGCTGGAAAGCGGCGTTGACATTCTGATTGGCACCACGGGGCGTTTAATTGACTACGCCAAGCAGAACCACATTAACCTCGGTGCCATTCAGGTGGTGGTACTGGACGAAGCCGATCGCATGTACGATCTGGGCTTTATTAAAGATATCCGCTGGCTGTTCCGCCGTATGCCGCCTGCAAACCAGCGCCTCAACATGCTGTTCTCCGCCACGCTTTCGTACCGGGTACGTGAACTGGCGTTCGAGCAGATGAACAATGCCGAATATATTGAAGTGGAACCGGAACAGAAAACGGGCCACCGTATTAAAGAAGAGCTTTTCTACCCTTCTAACGAAGAAAAAATGCGTTTGCTGCAAACGCTGATCGAAGAAGAGTGGCCAGACAGAGCGATTATTTTCGCCAACACCAAACACCGTTGTGAAGAGATCTGGGGCCACCTGGCAGCAGATGGTCATCGTGTCGGTTTATTGACAGGCGATGTCGCGCAGAAAAAACGTCTGCGTATTCTTGATGAATTTACCCGTGGCGATCTGGATATTCTGGTTGCCACCGACGTTGCCGCGCGTGGTTTGCATATTCCGGCAGTGACGCACGTCTTTAACTACGATTTACCCGATGACTGTGAAGATTACGTTCACCGTATTGGTCGTACAGGTCGCGCAGGCGCAAGCGGTCACTCTATCAGCCTGGCGTGTGAAGAGTATGCATTGAATTTGCCTGCTATTGAGACCTATATTGGTCACTCAATTCCGGTAAGCAAATACAATCCGGACGCATTGATGACCGATCTGCCAAAACCGCTGCGCCTCACGCGCCCGCGCACAGGCAATGGTCCGCGTCGTACTGGCGCTCCGCGTAATCGTCGTCGTTCAGGTTAA", - "dna_sequence_length": 1266, - "functions": [ - "ATP-dependent RNA helicase" - ], - "id": "CDS_3721", - "location": [ - [ - "NC_000913", - 3965630, - "-", - 1266 - ] - ], - "md5": "b90e8dfb70a592cfe5d43a15828bfc98", - "parent_gene": "", - "protein_md5": "9e62102c3fed86ead29103fc484a13af", - "protein_translation": "MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG", - "protein_translation_length": 421, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "fip" - ], - [ - "gene_synonym", - "NP_418228.2" - ], - [ - "gene_synonym", - "ECK3773" - ], - [ - "gene_synonym", - "GI:67005950" - ], - [ - "gene_synonym", - "fipA" - ], - [ - "gene_synonym", - "EcoGene:EG11031" - ], - [ - "gene_synonym", - "ASAP:ABE-0012357" - ], - [ - "gene_synonym", - "tsnC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AA25" - ], - [ - "gene_synonym", - "trxA" - ], - [ - "gene_synonym", - "b3781" - ], - [ - "gene_synonym", - "JW5856" - ], - [ - "gene_synonym", - "dasC" - ], - [ - "gene_synonym", - "GeneID:948289" - ] - ], - "dna_sequence": "ATGAGCGATAAAATTATTCACCTGACTGACGACAGTTTTGACACGGATGTACTCAAAGCGGACGGGGCGATCCTCGTCGATTTCTGGGCAGAGTGGTGCGGTCCGTGCAAAATGATCGCCCCGATTCTGGATGAAATCGCTGACGAATATCAGGGCAAACTGACCGTTGCAAAACTGAACATCGATCAAAACCCTGGCACTGCGCCGAAATATGGCATCCGTGGTATCCCGACTCTGCTGCTGTTCAAAAACGGTGAAGTGGCGGCAACCAAAGTGGGTGCACTGTCTAAAGGTCAGTTGAAAGAGTTCCTCGACGCTAACCTGGCGTAA", - "dna_sequence_length": 330, - "functions": [ - "thioredoxin 1" - ], - "id": "CDS_3722", - "location": [ - [ - "NC_000913", - 3965761, - "+", - 330 - ] - ], - "md5": "a7a8587848df43a538e10224d95f3da6", - "parent_gene": "", - "protein_md5": "850143d49315e8891aad60bd107000ef", - "protein_translation": "MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG30" - ], - [ - "gene_synonym", - "ECK3775" - ], - [ - "gene_synonym", - "rho" - ], - [ - "gene_synonym", - "psuA" - ], - [ - "gene_synonym", - "sun" - ], - [ - "gene_synonym", - "nusD" - ], - [ - "gene_synonym", - "NP_418230.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012362" - ], - [ - "gene_synonym", - "GeneID:948297" - ], - [ - "gene_synonym", - "rnsC" - ], - [ - "gene_synonym", - "hdf" - ], - [ - "gene_synonym", - "nitA" - ], - [ - "gene_synonym", - "tabC" - ], - [ - "gene_synonym", - "sbaA" - ], - [ - "gene_synonym", - "b3783" - ], - [ - "gene_synonym", - "EcoGene:EG10845" - ], - [ - "gene_synonym", - "JW3756" - ], - [ - "gene_synonym", - "tsu" - ], - [ - "gene_synonym", - "GI:16131639" - ] - ], - "dna_sequence": "ATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCATCCTGAAGCAGCACGCAAAGAGTGGCGAAGATATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACCATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAAAGTTAACGAAGTTAACTTCGACAAACCTGAAAACGCCCGCAACAAAATCCTCTTTGAGAACTTAACCCCGCTGCACGCAAACTCTCGTCTGCGTATGGAACGTGGTAACGGTTCTACTGAAGATTTAACTGCTCGCGTACTGGATCTGGCATCACCTATCGGTCGTGGTCAGCGTGGTCTGATTGTGGCACCGCCGAAAGCCGGTAAAACCATGCTGCTGCAGAACATTGCTCAGAGCATTGCTTACAACCACCCGGATTGTGTGCTGATGGTTCTGCTGATCGACGAACGTCCGGAAGAAGTAACCGAGATGCAGCGTCTGGTAAAAGGTGAAGTTGTTGCTTCTACCTTTGACGAACCCGCATCTCGCCACGTTCAGGTTGCGGAAATGGTGATCGAGAAGGCCAAACGCCTGGTTGAGCACAAGAAAGACGTTATCATTCTGCTCGACTCCATCACTCGTCTGGCGCGCGCTTACAACACCGTTGTTCCGGCGTCAGGTAAAGTGTTGACCGGTGGTGTGGATGCCAACGCCCTGCATCGTCCGAAACGCTTCTTTGGTGCGGCGCGTAACGTGGAAGAGGGCGGCAGCCTGACCATTATCGCGACGGCGCTTATCGATACCGGTTCTAAAATGGACGAAGTTATCTACGAAGAGTTTAAAGGTACAGGCAACATGGAACTGCACCTCTCTCGTAAGATCGCTGAAAAACGCGTCTTCCCGGCTATCGACTACAACCGTTCTGGTACCCGTAAAGAAGAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAA", - "dna_sequence_length": 1260, - "functions": [ - "transcription termination factor" - ], - "id": "CDS_3723", - "location": [ - [ - "NC_000913", - 3966417, - "+", - 1260 - ] - ], - "md5": "3c51ec2383d1feff8fda748972571467", - "parent_gene": "", - "protein_md5": "e130092e41361244e8362f098cdd0a85", - "protein_translation": "MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMKRS", - "protein_translation_length": 419, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3776" - ], - [ - "gene_synonym", - "GeneID:948789" - ], - [ - "gene_synonym", - "JW3758" - ], - [ - "gene_synonym", - "ASAP:ABE-0012366" - ], - [ - "gene_synonym", - "EcoGene:EG10840" - ], - [ - "gene_synonym", - "wecA" - ], - [ - "gene_synonym", - "b3784" - ], - [ - "gene_synonym", - "rfe" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC78" - ], - [ - "gene_synonym", - "NP_418231.1" - ], - [ - "gene_synonym", - "GI:16131640" - ] - ], - "dna_sequence": "GTGAATTTACTGACAGTGAGTACTGATCTCATCAGTATTTTTTTATTCACGACACTGTTTCTGTTTTTTGCCCGTAAGGTGGCAAAAAAAGTCGGTTTAGTGGATAAACCAAACTTCCGCAAACGTCACCAGGGATTGATACCTCTCGTTGGGGGGATTTCGGTTTACGCAGGGATTTGCTTCACGTTCGGAATTGTCGATTACTATATTCCGCATGCATCTCTCTATCTCGCTTGTGCCGGTGTGCTTGTTTTCATTGGCGCGCTGGATGACCGTTTTGATATCAGCGTAAAAATCCGTGCCACCATACAGGCCGCTGTTGGCATTGTTATGATGGTGTTCGGCAAGCTTTATCTCAGTAGCCTGGGTTATATCTTTGGCTCCTGGGAGATGGTGCTCGGACCGTTTGGTTACTTCCTGACGCTATTTGCCGTCTGGGCGGCCATTAATGCGTTCAACATGGTTGATGGCATTGATGGCTTGCTGGGCGGGTTGTCCTGCGTCTCGTTTGCAGCAATCGGTATGATTTTGTGGTTCGACGGGCAAACCAGCCTCGCAATCTGGTGCTTTGCGATGATCGCCGCCATCCTGCCATACATCATGCTTAACCTTGGTATCCTGGGTCGCCGCTACAAAGTCTTTATGGGTGATGCGGGCAGTACGCTGATTGGTTTTACCGTTATCTGGATCCTGCTCGAAACGACCCAGGGCAAAACCCATCCCATCAGCCCGGTTACCGCTTTGTGGATAATCGCCATTCCGCTAATGGATATGGTGGCGATTATGTACCGTCGCCTGCGTAAAGGCATGAGCCCATTCTCTCCTGACCGTCAGCATATTCACCATTTGATCATGCGTGCCGGGTTTACTTCCCGTCAGGCGTTTGTGCTGATTACCCTTGCCGCAGCACTGCTCGCTTCCATTGGCGTGCTGGCAGAATATTCTCATTTTGTCCCGGAGTGGGTCATGCTGGTGCTCTTTTTGCTAGCATTCTTCCTCTATGGATATTGCATTAAGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTAACCAAATAA", - "dna_sequence_length": 1104, - "functions": [ - "UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase" - ], - "id": "CDS_3724", - "location": [ - [ - "NC_000913", - 3967916, - "+", - 1104 - ] - ], - "md5": "84988a4fb8fc76c9d49679aaee1eb092", - "parent_gene": "", - "protein_md5": "e1e642cbdc86703a50e4621a3665c6b8", - "protein_translation": "MNLLTVSTDLISIFLFTTLFLFFARKVAKKVGLVDKPNFRKRHQGLIPLVGGISVYAGICFTFGIVDYYIPHASLYLACAGVLVFIGALDDRFDISVKIRATIQAAVGIVMMVFGKLYLSSLGYIFGSWEMVLGPFGYFLTLFAVWAAINAFNMVDGIDGLLGGLSCVSFAAIGMILWFDGQTSLAIWCFAMIAAILPYIMLNLGILGRRYKVFMGDAGSTLIGFTVIWILLETTQGKTHPISPVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPDRQHIHHLIMRAGFTSRQAFVLITLAAALLASIGVLAEYSHFVPEWVMLVLFLLAFFLYGYCIKRAWKVARFIKRVKRRLRRNRGGSPNLTK", - "protein_translation_length": 367, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3777" - ], - [ - "gene_synonym", - "GeneID:944815" - ], - [ - "gene_synonym", - "metNSt" - ], - [ - "gene_synonym", - "wzz" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG00" - ], - [ - "gene_synonym", - "yifC" - ], - [ - "gene_synonym", - "b3785" - ], - [ - "gene_synonym", - "ASAP:ABE-0012370" - ], - [ - "gene_synonym", - "EcoGene:EG11295" - ], - [ - "gene_synonym", - "wzzE" - ], - [ - "gene_synonym", - "NP_418232.2" - ], - [ - "gene_synonym", - "GI:90111649" - ], - [ - "gene_synonym", - "JW5601" - ] - ], - "dna_sequence": "ATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGTGGGTTGTTTCGTACCTTGTGGGCTGGGAAGCTATGGATTATTGGCATGGGGCTGGCGTTTGCGTTAATCGCGCTGGCGTATACGTTTTTTGCTCGTCAGGAGTGGAGCTCGACGGCGATTACCGATCGTCCAACGGTGAATATGCTGGGGGGATATTACTCGCAGCAGCAATTTTTGCGTAACCTGGATGTCCGTTCAAACATGGCTTCTGCCGACCAACCATCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCAACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTACAAACAGCGGATGGTGGGCAACAGCAAAGCCGATGCGGCGTTGCTGGATGAAATGATTAACAACATCCAGTTTATCCCCGGAGACTTTACCCGCGCGGTCAATGACAGCGTGAAGCTTATTGCCGAAACCGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGCCAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGGCGCGTACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAGAGGTGGCGAAAGCCATCTACGACCGCCGGATGAACAGCATTGAGCAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCGCGCAGTGCGACAGATGTACCTGCCGAGGAATTACCTGATTCAGAAATGTTCCTGCTTGGGCGTCCAATGCTTCAGGCTCGACTGGAAAATTTACAGGCCGTCGGTCCGGCCTTTGATCTCGACTATGATCAGAATCGGGCCATGTTAAACACCCTGAATGTTGGTCCAACCCTGGATCCGCGTTTTCAGACCTATCGCTATTTGCGTACGCCGGAAGAACCGGTAAAACGCGATAGCCCACGTCGTGCCTTCCTGATGATTATGTGGGGCATTGTCGGGGGGCTGATCGGGGCTGGTGTCGCATTAACCCGCCGTTGCTCGAAATAG", 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"UniProtKB/Swiss-Prot:P27828" - ], - [ - "gene_synonym", - "EcoGene:EG11451" - ], - [ - "gene_synonym", - "ECK3778" - ], - [ - "gene_synonym", - "b3786" - ], - [ - "gene_synonym", - "YP_026253.1" - ], - [ - "gene_synonym", - "JW5600" - ], - [ - "gene_synonym", - "wecB" - ], - [ - "gene_synonym", - "ASAP:ABE-0012372" - ], - [ - "gene_synonym", - "GI:49176409" - ] - ], - "dna_sequence": "GTGAAAGTACTGACTGTATTTGGTACGCGCCCGGAAGCCATCAAGATGGCGCCGTTGGTGCATGCGTTGGCAAAAGATCCTTTTTTTGAGGCTAAAGTTTGCGTCACTGCGCAGCATCGGGAGATGCTCGATCAGGTGCTGAAACTCTTTTCCATTGTACCTGACTACGATCTCAACATAATGCAGCCAGGACAGGGCCTGACAGAGATAACCTGTCGGATTCTGGAAGGGCTAAAACCTATTCTTGCCGAGTTCAAACCAGACGTCGTGCTGGTTCACGGCGATACGACGACGACGCTGGCAACCAGCCTGGCGGCGTTTTATCAGCGTATTCCTGTTGGTCACGTTGAGGCTGGTCTGCGCACGGGCGATCTCTATTCGCCGTGGCCGGAAGAGGCTAACCGTACATTGACCGGGCATCTGGCGATGTATCACTTCTCTCCAACCGAAACTTCCCGGCAAAACTTGCTGCGTGAAAACGTTGCGGATAGCCGAATCTTCATTACCGGTAATACAGTCATTGATGCACTGTTATGGGTGCGTGACCAGGTGATGAGCAGCGACAAGCTGCGTTCAGAACTGGCGGCAAATTACCCGTTTATCGACCCCGATAAAAAGATGATTCTGGTGACCGGTCACAGGCGTGAGAGTTTCGGTCGTGGCTTTGAAGAAATCTGCCACGCGCTGGCAGACATCGCCACCACGCACCAGGACATCCAGATTGTCTATCCGGTGCATCTCAACCCGAACGTCAGAGAACCGGTCAATCGCATTCTGGGGCATGTGAAAAATGTCATTCTGATCGATCCCCAGGAGTATTTACCGTTTGTCTGGCTGATGAACCACGCCTGGCTGATTTTGACCGACTCAGGCGGCATTCAGGAAGAAGCGCCTTCGCTGGGGAAACCTGTGCTGGTGATGCGCGATACCACTGAGCGTCCGGAAGCGGTGACGGCGGGTACGGTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGA", 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"gene_synonym", - "b3787" - ], - [ - "gene_synonym", - "JW5599" - ], - [ - "gene_synonym", - "wecC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27829" - ], - [ - "gene_synonym", - "ASAP:ABE-0012374" - ], - [ - "gene_synonym", - "GeneID:948977" - ], - [ - "gene_synonym", - "rff" - ] - ], - "dna_sequence": "ATGAGTTTTGCGACCATTTCTGTTATCGGACTGGGTTATATCGGGCTGCCAACGGCAGCAGCGTTTGCCTCACGGCAAAAACAGGTAATTGGTGTCGATATCAACCAACATGCGGTTGATACCATCAATCGTGGCGAAATCCATATCGTCGAACCTGATTTGGCGAGTGTAGTAAAAACTGCCGTAGAAGGCGGTTTTTTACGAGCGAGCACGACGCCAGTTGAAGCGGATGCCTGGCTGATTGCTGTACCCACGCCGTTTAAGGGCGATCATGAGCCAGATATGACCTACGTTGAATCGGCTGCTCGCTCCATTGCGCCAGTGCTGAAAAAAGGCGCGCTGGTGATCCTTGAATCCACCTCGCCGGTGGGGTCAACCGAGAAGATGGCAGAATGGTTAGCAGAGATGCGTCCGGATCTCACTTTCCCGCAGCAGGTGGGCGAGCAGGCGGACGTCAACATTGCTTACTGCCCGGAACGCGTGTTACCAGGACAGGTAATGGTCGAGCTGATTAAAAACGATCGCGTGATTGGTGGTATGACGCCGGTTTGTTCGGCCCGCGCCAGCGAACTGTACAAAATTTTCCTCGAAGGTGAGTGTGTCGTCACTAACTCGCGGACGGCGGAAATGTGTAAGCTCACCGAAAACAGCTTCCGCGATGTGAATATCGCTTTTGCTAATGAATTGTCGCTGATTTGTGCCGATCAGGGGATTAACGTCTGGGAACTGATTCGCCTGGCGAATCGTCACCCTCGCGTTAATATTCTTCAGCCTGGCCCTGGCGTGGGCGGTCACTGCATTGCTGTTGATCCGTGGTTTATCGTGGCACAGAACCCCCAGCAGGCGCGGCTTATCCGTACCGCGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACTGAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGACCGGGCTTTGTACTCTGGCGCAGCTTGACGAGGCGCTGGCAACGGCAGACGTGCTGGTGATGCTGGTCGATCATAGTCAGTTCAAAGTTATCAATGGCGACAATGTCCATCAGCAGTATGTCGTCGATGCCAAAGGAGTCTGGCGCTGA", - "dna_sequence_length": 1263, - "functions": [ - "UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase" - ], - "id": "CDS_3727", - "location": [ - [ - "NC_000913", - 3971260, - "+", - 1263 - ] - ], - "md5": "0dd10e5610e7cf5a01d2b88a9ea575a6", - "parent_gene": "", - "protein_md5": "b537b28dee348e1b4fa837926fcf6501", - "protein_translation": "MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLASVVKTAVEGGFLRASTTPVEADAWLIAVPTPFKGDHEPDMTYVESAARSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPERVLPGQVMVELIKNDRVIGGMTPVCSARASELYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINVWELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVAQNPQQARLIRTAREVNDHKPFWVIDQVKAAVADCLAATDKRASELKIACFGLAFKPNIDDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLTGLCTLAQLDEALATADVLVMLVDHSQFKVINGDNVHQQYVVDAKGVWR", - "protein_translation_length": 420, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rffG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27830" - ], - [ - "gene_synonym", - "GeneID:948300" - ], - [ - "gene_synonym", - "ECK3780" - ], - [ - "gene_synonym", - "EcoGene:EG11453" - ], - [ - "gene_synonym", - "GI:49176411" - ], - [ - "gene_synonym", - "JW5598" - ], - [ - "gene_synonym", - "rff" - ], - [ - "gene_synonym", - "YP_026255.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012376" - ], - [ - "gene_synonym", - "b3788" - ] - ], - "dna_sequence": "ATGAGAAAAATTCTGATAACAGGTGGTGCCGGGTTTATTGGCTCGGCGCTGGTGCGTTATATCATCAACGAAACGAGCGACGCGGTGGTAGTGGTCGATAAGCTGACCTACGCCGGAAACCTGATGTCGCTGGCACCGGTCGCGCAAAGCGAGCGCTTTGCCTTTGAGAAAGTTGATATCTGCGATCGGGCAGAACTGGCACGCGTATTCACTGAGCATCAGCCAGACTGTGTCATGCATCTGGCAGCCGAAAGCCATGTTGACCGTTCTATTGACGGCCCGGCAGCGTTTATTGAAACCAACATTGTCGGGACTTATACATTGCTTGAAGCGGCGCGGGCTTACTGGAATGCGCTGACGGAAGATAAAAAATCAGCGTTCCGTTTTCATCATATCTCCACTGACGAAGTATATGGTGACCTGCACTCGACGGATGATTTCTTCACCGAAACCACGCCGTATGCGCCGAGCAGCCCTTATTCCGCGTCAAAAGCCAGCAGCGACCATCTGGTGCGCGCCTGGCTGCGGACCTATGGTCTGCCGACGCTTATCACCAACTGCTCGAATAACTACGGCCCTTACCACTTTCCGGAAAAACTGATCCCGCTGATGATCCTCAACGCGCTGGCGGGTAAATCGCTGCCGGTATATGGCAACGGGCAGCAAATCCGTGACTGGCTGTATGTGGAAGATCACGCCCGCGCGCTGTATTGCGTGGCGACCACCGGGAAAGTCGGTGAAACCTATAATATTGGTGGTCACAACGAGCGTAAGAATCTCGATGTTGTGGAAACCATTTGCGAGCTGCTGGAAGAACTGGCTCCGAACAAGCCGCACGGCGTGGCGCACTATCGTGACCTGATCACCTTTGTCGCTGACCGTCCGGGGCATGATCTGCGTTATGCCATTGATGCTTCGAAAATTGCCCGTGAACTTGGCTGGCTGCCGCAGGAAACCTTTGAAAGTGGAATGCGTAAAACGGTTCAGTGGTATCTGGCTAATGAAAGCTGGTGGAAGCAGGTGCAGGACGGCAGCTATCAGGGCGAGCGTTTAGGTCTGAAAGGCTAA", - "dna_sequence_length": 1068, - "functions": [ - "dTDP-glucose 4,6-dehydratase" - ], - "id": "CDS_3728", - "location": [ - [ - "NC_000913", - 3972522, - "+", - 1068 - ] - ], - "md5": "145fc1573073868884765bc4bfb87629", - "parent_gene": "", - "protein_md5": "32a2f8e77bb8b999859069771986b659", - "protein_translation": "MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANESWWKQVQDGSYQGERLGLKG", - "protein_translation_length": 355, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yifG" - ], - [ - "gene_synonym", - "JW3763" - ], - [ - "gene_synonym", - "GeneID:948299" - ], - [ - "gene_synonym", - "ECK3781" - ], - [ - "gene_synonym", - "EcoGene:EG11454" - ], - [ - "gene_synonym", - "rffH" - ], - [ - "gene_synonym", - "NP_418236.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012379" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P61887" - ], - [ - "gene_synonym", - "GI:16131645" - ], - [ - "gene_synonym", - "b3789" - ] - ], - "dna_sequence": "ATGAAAGGTATTATCCTGGCGGGCGGTTCCGGCACCCGATTGCATCCGATTACGCGCGGCGTATCGAAGCAACTGTTGCCGATTTACGATAAGCCAATGATTTACTATCCGCTGTCGGTGCTGATGCTGGCCGGTATCCGCGAAATTCTCATCATCACTACGCCGGAAGATAAAGGTTATTTCCAGCGCCTGCTGGGCGATGGTAGTGAGTTCGGTATCCAGCTGGAATATGCCGAACAGCCCAGCCCGGACGGTCTGGCGCAGGCCTTTATCATCGGTGAAACCTTCCTTAATGGTGAACCTTCTTGTCTGGTGCTGGGCGATAACATCTTCTTCGGTCAGGGCTTCAGTCCGAAGCTGCGTCATGTTGCGGCGCGCACCGAAGGGGCGACGGTTTTTGGCTATCAGGTGATGGACCCGGAACGCTTTGGCGTGGTGGAGTTTGACGACAATTTCCGCGCTATCTCGCTGGAAGAAAAGCCAAAACAGCCGAAGTCAAACTGGGCGGTGACCGGGCTTTATTTCTACGACAGTAAAGTCGTGGAGTACGCAAAGCAGGTGAAGCCGTCGGAGCGTGGTGAACTGGAGATTACCTCCATCAACCAGATGTACCTCGAGGCGGGCAACCTGACCGTTGAACTGCTCGGGCGCGGATTTGCCTGGCTGGATACCGGCACTCACGACAGCCTGATTGAAGCCAGCACCTTTGTACAGACGGTGGAAAAACGCCAGGGCTTTAAGATTGCCTGCCTGGAAGAGATTGCCTGGCGTAACGGCTGGCTCGATGACGAGGGTGTGAAGCGTGCTGCCAGTTCATTAGCGAAAACTGGCTACGGCCAATATCTGCTGGAGTTACTTCGTGCCCGTCCGCGCCAGTATTGA", - "dna_sequence_length": 882, - "functions": [ - "glucose-1-phosphate thymidylyltransferase" - ], - "id": "CDS_3729", - "location": [ - [ - "NC_000913", - 3973608, - "+", - 882 - ] - ], - "md5": "57f409aaacdf7385ae9732b1c1b9bac3", - "parent_gene": "", - "protein_md5": "b7d76c77f5a577c36c796f4a525396a0", - "protein_translation": "MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGDGSEFGIQLEYAEQPSPDGLAQAFIIGETFLNGEPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMDPERFGVVEFDDNFRAISLEEKPKQPKSNWAVTGLYFYDSKVVEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRGFAWLDTGTHDSLIEASTFVQTVEKRQGFKIACLEEIAWRNGWLDDEGVKRAASSLAKTGYGQYLLELLRARPRQY", - "protein_translation_length": 293, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27832" - ], - [ - "gene_synonym", - "YP_026256.2" - ], - [ - "gene_synonym", - "rffC" - ], - [ - "gene_synonym", - "ECK3782" - ], - [ - "gene_synonym", - "wecD" - ], - [ - "gene_synonym", - "yifH" - ], - [ - "gene_synonym", - "EcoGene:EG11455" - ], - [ - "gene_synonym", - "GeneID:948298" - ], - [ - "gene_synonym", - "GI:145698332" - ], - [ - "gene_synonym", - "rff" - ], - [ - "gene_synonym", - "b3790" - ], - [ - "gene_synonym", - "JW5597" - ], - [ - "gene_synonym", - "ASAP:ABE-0012382" - ] - ], - "dna_sequence": "GTGCCCGTCCGCGCCAGTATTGAGCCACTAACCTGGGAAAACGCCTTCTTTGGTGTTAACAGCGCCATCGTGCGCATTACGTCTGAAGCACCGCTCCTGACGCCAGACGCGTTAGCGCCGTGGTCACGGGTGCAGGCCAAAATTGCGGCATCAAATACGGGTGAACTGGATGCCCTGCAACAGCTGGGATTCTCCCTGGTAGAAGGTGAAGTTGATTTGGCGCTACCCGTGAACAATGCCAGTGATAGCGGTGCTGTAGTGGCACAAGAGACCGATATTCCCGCATTACGTCAGTTAGCCAGCGCCGCATTTGCGCAAAGCCGTTTTCGTGCGCCGTGGTATGCGCCTGACGCCAGCAGTCGCTTTTATGCACAGTGGATTGAAAATGCCGTGCGCGGCACCTTTGATCATCAATGTCTGATTTTACGTGCGGCGTCCGGCGATATTCGCGGCTATGTCTCTTTACGGGAACTCAATGCGACAGATGCGCGAATTGGCCTGCTGGCTGGACGCGGTGCAGGTGCTGAGCTGATGCAAACGGCGCTAAACTGGGCGTATGCTCGCGGTAAAACAACTTTGCGGGTGGCGACCCAAATGGGCAACACCGCCGCGCTTAAACGATACATACAAAGTGGTGCGAATGTAGAAAGCACCGCGTACTGGTTATACAGGTGA", - "dna_sequence_length": 675, - "functions": [ - "TDP-fucosamine acetyltransferase" - ], - "id": "CDS_3730", - "location": [ - [ - "NC_000913", - 3974467, - "+", - 675 - ] - ], - "md5": "da13241ad109fbcf8cbd717557534dc4", - "parent_gene": "", - "protein_md5": "d8d640ee974e4931916308812d82ca8e", - "protein_translation": "MPVRASIEPLTWENAFFGVNSAIVRITSEAPLLTPDALAPWSRVQAKIAASNTGELDALQQLGFSLVEGEVDLALPVNNASDSGAVVAQETDIPALRQLASAAFAQSRFRAPWYAPDASSRFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELNATDARIGLLAGRGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVESTAYWLYR", - "protein_translation_length": 224, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27833" - ], - [ - "gene_synonym", - "JW3765" - ], - [ - "gene_synonym", - "rffA" - ], - [ - "gene_synonym", - "wecE" - ], - [ - "gene_synonym", - "ECK3783" - ], - [ - "gene_synonym", - "yifI" - ], - [ - "gene_synonym", - "EcoGene:EG11456" - ], - [ - "gene_synonym", - "GeneID:948296" - ], - [ - "gene_synonym", - "rff" - ], - [ - "gene_synonym", - "b3791" - ], - [ - "gene_synonym", - "ASAP:ABE-0012384" - ], - [ - "gene_synonym", - "GI:16131647" - ], - [ - "gene_synonym", - "NP_418238.1" - ] - ], - "dna_sequence": "ATGATTCCATTTAACGCACCGCCGGTGGTGGGAACCGAACTCGACTATATGCAGTCGGCAATGGGTAGCGGCAAACTGTGTGGCGATGGCGGTTTTACCCGTCGCTGCCAGCAGTGGCTGGAGCAACGTTTTGGCAGCGCCAAAGTGTTACTGACGCCGTCCTGCACCGCTTCGCTGGAGATGGCGGCGCTGCTGCTCGATATCCAGCCTGGCGATGAAGTGATCATGCCGAGCTACACCTTTGTCTCCACCGCCAATGCCTTTGTGCTGCGTGGCGCAAAAATCGTTTTTGTGGATGTTCGCCCGGACACCATGAACATCGACGAAACGCTGATTGAAGCGGCGATCACCGACAAAACGCGCGTTATCGTGCCGGTCCATTACGCGGGTGTGGCCTGCGAAATGGACACCATTATGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAGGTCGATAAATATACCTGGCGCGATATTGGCTCCAGCTATTTGATGTCCGATCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCGAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAATCATGGCGGTGTTTCATTACATTCCGCTGCACGGTTGCCCTGCGGGGGAACACTTTGGTGAGTTCCACGGTGAAGATCGCTACACCACCAAAGAGAGCGAGCGCCTGCTGCGCCTGCCGCTGTTCTACAACCTGTCGCCCGTCAATCAGCGTACGGTAATTGCGACTTTGTTGAACTACTTTTCCTGA", 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"gene_synonym", - "GeneID:948294" - ], - [ - "gene_synonym", - "NP_418239.1" - ], - [ - "gene_synonym", - "b3792" - ], - [ - "gene_synonym", - "ECK3784" - ], - [ - "gene_synonym", - "EcoGene:EG11486" - ], - [ - "gene_synonym", - "ASAP:ABE-0012386" - ], - [ - "gene_synonym", - "GI:16131648" - ] - ], - "dna_sequence": "ATGTCGTTGGCAAAAGCGTCCTTGTGGACGGCGGCCAGTACACTGGTCAAGATTGGTGCCGGGTTACTGGTCGGTAAGTTGCTGGCGGTGTCATTTGGTCCGGCGGGGCTTGGGCTGGCGGCAAATTTCCGCCAGTTGATTACCGTGCTCGGCGTGCTTGCCGGGGCTGGCATCTTTAACGGTGTAACCAAATACGTTGCCCAGTACCATGATAATCCGCAACAGCTGCGCCGCGTGGTCGGCACTTCATCAGCGATGGTACTTGGTTTCTCTACGCTGATGGCGCTGGTTTTTGTGCTGGCAGCTGCGCCAATCAGCCAGGGATTGTTTGGTAATACCGACTATCAGGGGCTGGTGCGTTTAGTGGCGCTGGTGCAAATGGGGATCGCCTGGGGCAACCTGTTACTGGCGCTGATGAAAGGCTTTCGCGATGCCGCAGGTAATGCGTTATCGCTGATTGTCGGCAGCTTGATTGGCGTTCTCGCGTACTACGTCAGTTACCGTTTGGGCGGTTATGAAGGGGCGTTGCTGGGTCTGGCGCTGATTCCCGCGCTGGTGGTAATTCCTGCCGCCATCATGTTGATCAAACGTGGTGTCATCCCGTTAAGCTATCTGAAACCCAGCTGGGATAACGGTCTGGCAGGGCAGTTGAGCAAATTTACGCTCATGGCGTTGATTACGTCGGTGACCTTGCCTGTTGCTTACATCATGATGCGTAAACTGCTGGCGGCGCAGTATAGCTGGGATGAGGTGGGGATCTGGCAAGGGGTGAGCAGTATTTCCGATGCCTACCTGCAATTTATTACGGCATCGTTCAGCGTATATTTGCTGCCCACGTTGTCGCGGCTAACGGAAAAGCGCGATATCACCCGGGAAGTGGTTAAATCGCTGAAATTCGTCTTACCGGCAGTGGCGGCGGCGAGTTTTACCGTCTGGCTGCTGCGTGATTTTGCTATCTGGCTGCTGTTGTCGAATAAATTTACCGCTATGCGCGATCTCTTTGCCTGGCAGTTAGTGGGTGATGTGTTAAAAGTGGGCGCTTATGTCTTTGGTTATCTGGTGATCGCCAAAGCGTCACTGCGGTTTTATATTCTGGCGGAAGTCAGCCAGTTCACTTTATTGATGGTATTTGCCCACTGGCTAATCCCTGCGCATGGTGCACTGGGCGCGGCGCAGGCATATATGGCAACTTATATCGTCTATTTTTCTCTTTGTTGTGGCGTGTTTTTACTCTGGCGTAGGCGGGCATGA", - "dna_sequence_length": 1251, - "functions": [ - "O-antigen translocase" - ], - "id": "CDS_3732", - "location": [ - [ - "NC_000913", - 3976278, - "+", - 1251 - ] - ], - "md5": "3c8bc8b70d1a4954b523132bed324842", - "parent_gene": "", - "protein_md5": "5e48f84aa5ae7f1793eb12dc593c0fcd", - "protein_translation": "MSLAKASLWTAASTLVKIGAGLLVGKLLAVSFGPAGLGLAANFRQLITVLGVLAGAGIFNGVTKYVAQYHDNPQQLRRVVGTSSAMVLGFSTLMALVFVLAAAPISQGLFGNTDYQGLVRLVALVQMGIAWGNLLLALMKGFRDAAGNALSLIVGSLIGVLAYYVSYRLGGYEGALLGLALIPALVVIPAAIMLIKRGVIPLSYLKPSWDNGLAGQLSKFTLMALITSVTLPVAYIMMRKLLAAQYSWDEVGIWQGVSSISDAYLQFITASFSVYLLPTLSRLTEKRDITREVVKSLKFVLPAVAAASFTVWLLRDFAIWLLLSNKFTAMRDLFAWQLVGDVLKVGAYVFGYLVIAKASLRFYILAEVSQFTLLMVFAHWLIPAHGALGAAQAYMATYIVYFSLCCGVFLLWRRRA", - "protein_translation_length": 416, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:2847677" - ], - [ - "gene_synonym", - "YP_026257.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0174115" - ], - [ - "gene_synonym", - "yifM" - ], - [ - "gene_synonym", - "wecF" - ], - [ - "gene_synonym", - "GI:49176413" - ], - [ - "gene_synonym", - "b4481" - ], - [ - "gene_synonym", - "ECK3785" - ], - [ - "gene_synonym", - "rffT" - ], - [ - "gene_synonym", - "rff" - ], - [ - "gene_synonym", - "EcoGene:EG14320" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P56258" - ], - [ - "gene_synonym", - "JW5596" - ] - ], - "dna_sequence": "ATGACTGTACTGATTCACGTACTGGGATCGGATATCCCTCACCATAACCGAACCGTTTTGCGGTTTTTCAATGACGCGCTGGCCGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACACTGTGGCTGGCTCTGCTGAGTGGTGGCATTAAGCCCAGCCAGTTTTTCTGGCATATCTGGGGGGCAGACCTGTATGAGCTTTCCAGTGGCTTGAGATATAAGCTTTTTTACCCACTACGTCGCCTGGCGCAAAAGCGAGTCGGCTGTGTATTTGCCACCCGCGGCGATTTGAGCTTTTTTGCCAAAACGCACCCAAAGGTGCGGGGCGAACTGCTGTTCTTCCCGACGCGGATGGACCCTTCGCTCAATACGATGGCGAACGATCGGCAACGTGAAGGGAAAATGACCATTCTGGTGGGGAACTCCGGCGACCGCAGCAATGAGCATATTGCTGCCTTGCGCGCCGTTCATCAGCAATTTGGCGATACGGTAAAAGTGGTGGTGCCGATGGGATATCCGCCTAATAACGAAGCGTACATTGAGGAAGTTCGTCAGGCGGGGCTGGAGTTATTCAGCGAAGAAAATCTACAAATTCTGAGCGAAAAACTGGAATTTGACGCCTATCTGGCGCTACTTCGTCAGTGCGATCTTGGTTACTTTATTTTTGCCCGCCAGCAGGGCATTGGTACGCTGTGCTTACTGATTCAGGCGGGCATTCCTTGTGTGCTTAACCGGGAAAATCCGTTCTGGCAGGATATGACGGAACAACATTTGCCGGTGCTGTTTACTACCGACGATCTCAACGAGGATATTGTGCGTGAAGCGCAGCGCCAGTTGGCGTCGGTGGATAAAAACACCATTGCCTTCTTTAGCCCTAACTATCTACAAGGCTGGCAGCGGGCGTTGGCGATTGCCGCCAGGGAGGTCGCATGA", - "dna_sequence_length": 1080, - "functions": [ - "TDP-Fuc4NAc:lipidIIFuc4NAc transferase" - ], - "id": "CDS_3733", - "location": [ - [ - "NC_000913", - 3977525, - "+", - 1080 - ] - ], - "md5": "f804416b6b8357c74d6cfe2c44174e9e", - "parent_gene": "", - "protein_md5": "6bf932ff6fa023d3d29007ab797a95fb", - "protein_translation": "MTVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDDGLSDSCPALSVQFFPGKKSLAEAVIAKAKANRQQRFFFHGQFNPTLWLALLSGGIKPSQFFWHIWGADLYELSSGLRYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGELLFFPTRMDPSLNTMANDRQREGKMTILVGNSGDRSNEHIAALRAVHQQFGDTVKVVVPMGYPPNNEAYIEEVRQAGLELFSEENLQILSEKLEFDAYLALLRQCDLGYFIFARQQGIGTLCLLIQAGIPCVLNRENPFWQDMTEQHLPVLFTTDDLNEDIVREAQRQLASVDKNTIAFFSPNYLQGWQRALAIAAREVA", - "protein_translation_length": 359, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27835" - ], - [ - "gene_synonym", - "ECK3786" - ], - [ - "gene_synonym", - "wzyE" - ], - [ - "gene_synonym", - "JW3769" - ], - [ - "gene_synonym", - "EcoGene:EG11457" - ], - [ - "gene_synonym", - "rffT" - ], - [ - "gene_synonym", - "GI:16131649" - ], - [ - "gene_synonym", - "b3793" - ], - [ - "gene_synonym", - "GeneID:948293" - ], - [ - "gene_synonym", - "NP_418241.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012392" - ] - ], - "dna_sequence": "ATGAGTCTGCTGCAATTCAGTGGCCTGTTTGTTGTCTGGCTGCTCTGCACGCTGTTTATTGCCACGCTGACCTGGTTTGAGTTTCGCCGTGTGCGCTTTAACTTCAATGTCTTCTTTTCATTGCTGTTTTTGCTCACCTTTTTCTTCGGCTTCCCGCTGACCAGCGTGCTGGTATTTCGCTTTGATGTTGGTGTCGCGCCGCCAGAAATCTTGTTGCAGGCGTTGCTTTCTGCGGGCTGCTTCTACGCGGTTTACTATGTCACCTACAAAACCCGCCTACGCAAACGCGTTGCTGATGTACCGCGCCGTCCGCTGTTTACCATGAACCGCGTGGAGACCAATCTTACGTGGGTGATCCTGATGGGTATCGCGCTGGTAAGCGTCGGCATCTTCTTCATGCACAACGGCTTTTTGCTGTTCCGGCTTAACTCCTACAGTCAGATCTTTTCCAGTGAAGTCTCCGGCGTGGCGTTAAAACGCTTCTTTTACTTTTTCATCCCGGCGATGCTGGTGGTCTACTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTCGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAGCGGCGATGAAGCGTTCTATACGTTTCTCTATCTCACTCGCGACACCTTCTCGCCGTGGGAGAATCTGGCGTTGCTGTTGCAGAACTACGACAACATCGACTTCCAGGGCCTGGCTCCAATTGTCCGCGATTTCTATGTCTTTATCCCTTCCTGGCTGTGGCCGGGTCGCCCGAGTATGGTGCTGAACTCAGCCAACTACTTTACCTGGGAAGTGCTGAATAACCACTCCGGACTGGCGATCTCGCCTACGCTTATAGGCTCACTGGTGGTGATGGGCGGCGCGTTGTTCATCCCGCTCGGGGCGATCGTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACAGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTGGTCTTCGGCGCATGTCTGATGATCGCAAAACTGTTGTACTGGCTTTTTGAAAGCGCCGGACTCATTCATAAACGTACAAAATCATCGCTCCGGACGCAGGTTGAAGGATAA", - "dna_sequence_length": 1353, - "functions": [ - "putative ECA polysaccharide chain elongation protein" - ], - "id": "CDS_3734", - "location": [ - [ - "NC_000913", - 3978601, - "+", - 1353 - ] - ], - "md5": "2eae9cf524421160ae21e586006fa816", - "parent_gene": "", - "protein_md5": "57545119ea045da1671ae8663a816de5", - "protein_translation": "MSLLQFSGLFVVWLLCTLFIATLTWFEFRRVRFNFNVFFSLLFLLTFFFGFPLTSVLVFRFDVGVAPPEILLQALLSAGCFYAVYYVTYKTRLRKRVADVPRRPLFTMNRVETNLTWVILMGIALVSVGIFFMHNGFLLFRLNSYSQIFSSEVSGVALKRFFYFFIPAMLVVYFLRQDSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIGIIRGWISLWMLAAAGVLGIVGMFWLALKRYGMNVSGDEAFYTFLYLTRDTFSPWENLALLLQNYDNIDFQGLAPIVRDFYVFIPSWLWPGRPSMVLNSANYFTWEVLNNHSGLAISPTLIGSLVVMGGALFIPLGAIVVGLIIKWFDWLYELGNREPNRYKAAILHSFCFGAIFNMIVLAREGLDSFVSRVVFFIVVFGACLMIAKLLYWLFESAGLIHKRTKSSLRTQVEG", - "protein_translation_length": 450, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11458" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27836" - ], - [ - "gene_synonym", - "wecG" - ], - [ - "gene_synonym", - "rffM" - ], - [ - "gene_synonym", - "ECK3787" - ], - [ - "gene_synonym", - "NP_418242.1" - ], - [ - "gene_synonym", - "b3794" - ], - [ - "gene_synonym", - "rff" - ], - [ - "gene_synonym", - "GeneID:948301" - ], - [ - "gene_synonym", - "JW3770" - ], - [ - "gene_synonym", - "ASAP:ABE-0012394" - ], - [ - "gene_synonym", - "GI:16131650" - ] - ], - "dna_sequence": "ATGAATAACAACACCACGGCACCAACCTATACGCTGCGTGGCTTACAGTTGATTGGTTGGCGTGATATGCAGCACGCCCTCGATTATCTGTTTGCTGACGGGCAGCTTAAGCAGGGAACGCTGGTTGCCATTAATGCTGAAAAAATGCTGACTATTGAAGATAACGCCGAGGTCAGGGAGTTAATTAACGCTGCCGAATTTAAATATGCGGATGGCATCAGCGTTGTACGTTCAGTACGTAAAAAGTACCCGCAGGCGCAGGTTTCCCGCGTTGCCGGTGCCGATCTCTGGGAAGAGCTGATGGCGCGCGCAGGCAAAGAAGGGACGCCGGTATTTCTTGTGGGCGGTAAACCTGAAGTGCTGGCGCAAACTGAAGCTAAACTGCGCAACCAGTGGAATGTGAATATCGTTGGCAGTCAGGATGGTTATTTTAAACCCGAGCAGCGTCAGGCGCTGTTTGAACGCATTCATGCCAGCGGTGCGCAAATCGTCACCGTTGCGATGGGATCGCCAAAGCAGGAGATCATCATGCGCGACTGCCGTCTGGTACATCCAGATGCGCTGTATATGGGCGTTGGCGGGACTTACGATGTTTTCACCGGTCACGTAAAACGCGCACCGAAAATCTGGCAAACGCTGGGGCTGGAGTGGCTCTACCGCCTGCTTTCGCAGCCGAGCCGCATTAAGCGTCAGCTTCGTTTGCTGCGTTATTTACGCTGGCACTACACCGGCAACCTATGA", - "dna_sequence_length": 741, - "functions": [ - "UDP-N-acetyl-D-mannosaminuronic acid transferase" - ], - "id": "CDS_3735", - "location": [ - [ - "NC_000913", - 3979956, - "+", - 741 - ] - ], - "md5": "d52e480112d19f15084d30d38c285523", - "parent_gene": "", - "protein_md5": "7bcb3ae05418b073014427bca8aecada", - "protein_translation": "MNNNTTAPTYTLRGLQLIGWRDMQHALDYLFADGQLKQGTLVAINAEKMLTIEDNAEVRELINAAEFKYADGISVVRSVRKKYPQAQVSRVAGADLWEELMARAGKEGTPVFLVGGKPEVLAQTEAKLRNQWNVNIVGSQDGYFKPEQRQALFERIHASGAQIVTVAMGSPKQEIIMRDCRLVHPDALYMGVGGTYDVFTGHVKRAPKIWQTLGLEWLYRLLSQPSRIKRQLRLLRYLRWHYTGNL", - "protein_translation_length": 246, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11459" - ], - [ - "gene_synonym", - "ECK3788" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27837" - ], - [ - "gene_synonym", - "GeneID:945400" - ], - [ - "gene_synonym", - "YP_026258.1" - ], - [ - "gene_synonym", - "b3795" - ], - [ - "gene_synonym", - "GI:49176414" - ], - [ - "gene_synonym", - "ASAP:ABE-0012397" - ], - [ - "gene_synonym", - "yifK" - ], - [ - "gene_synonym", - "JW5595" - ] - ], - "dna_sequence": "ATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGGGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAATGTTGTTCCTCGAACCGGTTACCGGTTCGTTCGCCGTTTATGCGCATCGTTATATGAGCCCGTTCTTTGGCTATCTCACCGCCTGGTCTTACTGGTTTATGTGGATGGCGGTGGGGATCTCTGAAATCACCGCCATTGGCGTTTATGTCCAGTTCTGGTTCCCGGAGATGGCGCAGTGGATACCCGCATTGATCGCAGTGGCGCTGGTGGCGTTGGCGAATCTGGCGGCGGTGCGGTTGTACGGCGAAATCGAGTTCTGGTTCGCGATGATCAAAGTCACCACGATTATCGTGATGATTGTCATTGGCCTGGGCGTGATTTTCTTTGGCTTTGGCAATGGCGGGCAGTCGATTGGTTTTAGCAATCTCACAGAGCATGGCGGTTTCTTTGCGGGTGGCTGGAAAGGGTTCCTGACCGCTCTGTGTATTGTGGTGGCGTCCTACCAGGGCGTGGAGCTGATTGGCATTACTGCCGGTGAAGCGAAGAATCCGCAGGTGACGCTGCGCAGTGCCGTAGGCAAGGTGCTGTGGCGGATCCTGATTTTCTACGTAGGCGCGATTTTCGTTATCGTCACCATCTTCCCGTGGAATGAAATAGGCAGCAACGGCAGCCCGTTCGTACTGACTTTTGCCAAAATCGGTATTACCGCAGCGGCGGGCATTATCAACTTTGTGGTGCTGACGGCTGCGCTCTCTGGCTGTAACAGCGGCATGTACAGTTGCGGACGTATGCTCTACGCACTGGCGAAAAACCGTCAGTTACCGGCGGCAATGGCGAAAGTTTCCCGTCACGGCGTACCGGTTGCGGGTGTGGCAGTATCTATTGCTATTCTGCTAATTGGCTCATGCCTGAACTACATCATTCCCAATCCGCAGCGTGTGTTTGTCTACGTCTACAGTGCCAGCGTGCTTCCGGGGATGGTGCCATGGTTTGTGATATTGATAAGCCAGCTGCGTTTTCGGCGTGCACATAAAGCGGCGATTGCCAGCCATCCGTTCCGCTCAATCCTGTTCCCGTGGGCCAATTACGTAACAATGGCATTCCTGATTTGCGTTTTGATCGGCATGTACTTTAATGAAGATACGCGTATGTCGCTGTTTGTTGGCATCATCTTTATGCTGGCGGTGACGGCGATTTATAAAGTTTTTGGCCTTAATCGCCACGGGAAAGCGCATAAACTGGAGGAATAA", - "dna_sequence_length": 1386, - "functions": [ - "putative APC family amino acid transporter" - ], - "id": "CDS_3736", - "location": [ - [ - "NC_000913", - 3980887, - "+", - 1386 - ] - ], - "md5": "d48bb65b8b84cdcc70d48141b1266158", - "parent_gene": "", - "protein_md5": "841c5204136ea32468432b62f37eaee1", - "protein_translation": "MADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVMIVIGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAMAKVSRHGVPVAGVAVSIAILLIGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAAIASHPFRSILFPWANYVTMAFLICVLIGMYFNEDTRMSLFVGIIFMLAVTAIYKVFGLNRHGKAHKLEE", - "protein_translation_length": 461, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_026259.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012408" - ], - [ - "gene_synonym", - "atsB" - ], - [ - "gene_synonym", - "ECK3793" - ], - [ - "gene_synonym", - "aslB" - ], - [ - "gene_synonym", - "EcoGene:EG10090" - ], - [ - "gene_synonym", - "GI:49176415" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25550" - ], - [ - "gene_synonym", - "GeneID:949013" - ], - [ - "gene_synonym", - "b3800" - ], - [ - "gene_synonym", - "gppB" - ], - [ - "gene_synonym", - "JW5594" - ] - ], - "dna_sequence": "ATGCTGCAACAGGTTCCAACGCGTGCTTTTCATGTGATGGCGAAACCGAGCGGTTCCGATTGTAATCTGAACTGTGACTACTGTTTTTATCTCGAAAAACAATCCCTTTACCGCGAAAAGCCAGTCACGCATATGGACGATGACACGCTGGAAGCGTATGTCCGTCACTATATCGCTGCCAGCGAACCGCAAAACGAAGTGGCTTTTACCTGGCAGGGCGGCGAACCAACGCTACTCGGGCTGGCGTTTTACCGCCGTGCCGTAGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACGCTCCTGCAAAAACATCATGTCGACTATAACGTGCTGGTCTGCGTTAATCGCACCAGCGCGCAGCAACCGTTGCAGGTATATGATTTTTTGTGCGATGCGGGAGTCGAATTCATCCAGTTTATTCCGGTGGTCGAGCGCCTGGCTGATGAAACAACTGCCCGCGATGGACTTAAGTTACATGCGCCTGGTGATATTCAGGGTGAGCTAACGGAATGGTCGGTGCGCCCCGAGGAGTTCGGTGAGTTTCTGGTGGCGATATTCGACCACTGGATCAAACGCGACGTCGGCAAGATTTTCGTGATGAATATCGAATGGGCGTTTGCCAATTTTGTCGGTGCGCCGGGTGCGGTTTGCCATCATCAGCCAACCTGTGGGCGCTCGGTGATTGTTGAGCACAACGGCGACGTTTACGCCTGTGATCACTATGTTTATCCGCAATATCGGCTGGGGAATATGCACCAGCAAACAATTGCAGAAATGATCGATTCCCCGCAACAGCAGGCGTTTGGTGAAGATAAATTTAAGCAGTTACCGGCGCAGTGTCGCAGTTGTAACGTGTTAAAAGCGTGCTGGGGAGGCTGCCCGAAACACCGCTTCATGCTCGATGCCAGCGGCAAACCGGGACTGAATTATTTGTGTGCCGGGTATCAGCGTTATTTCCGCCATCTACCGCCATATCTTAAAGCAATGGCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAG", - "dna_sequence_length": 1236, - "functions": [ - "putative AslA-specific sulfatase-maturating enzyme" - ], - "id": "CDS_3737", - "location": [ - [ - "NC_000913", - 3982958, - "+", - 1236 - ] - ], - "md5": "20cee5e5d0e3622f279ca3cc6412111e", - "parent_gene": "", - "protein_md5": "65f0340619ab4eb85faa86197b9a7c9f", - "protein_translation": "MLQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYREKPVTHMDDDTLEAYVRHYIAASEPQNEVAFTWQGGEPTLLGLAFYRRAVALQAKYGAGRKISNSFQTNGVLLDDEWCAFLAEHHFLVGLSLDGPPEIHNQYRVTKGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSAQQPLQVYDFLCDAGVEFIQFIPVVERLADETTARDGLKLHAPGDIQGELTEWSVRPEEFGEFLVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVCHHQPTCGRSVIVEHNGDVYACDHYVYPQYRLGNMHQQTIAEMIDSPQQQAFGEDKFKQLPAQCRSCNVLKACWGGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMADLLAHGRPASDIMHAHLLVVSK", - "protein_translation_length": 411, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:949015" - ], - [ - "gene_synonym", - "b3801" - ], - [ - "gene_synonym", - "gppB" - ], - [ - "gene_synonym", - "ECK3794" - ], - [ - "gene_synonym", - "atsA" - ], - [ - "gene_synonym", - "aslA" - ], - [ - "gene_synonym", - "NP_418245.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012411" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25549" - ], - [ - "gene_synonym", - "EcoGene:EG10089" - ], - [ - "gene_synonym", - "JW3773" - ], - [ - "gene_synonym", - "GI:16131653" - ] - ], - "dna_sequence": "ATGGAATTTTCGTTTTCACCCAAACGTCTTGTTGTTGCTGTCGCCGCCGCTCTTCCTCTCATGGCCAGCGCAGCAGATACCCCGTCAACTGCCACCGCACGCAAAGGCTTTGCCGGATACGATCACCCAAACCAGTATCTGGTTAAACCGGCGACCACTATTGCCGACAATATGATGCCAGTAATGCAGCATCCGGCGCAGGATAAAGAAACCCAGCAGAAGCTGGCAGAACTTGAGAAAAAAACCGGTAAGAAACCGAATGTGGTTGTTTTCTTGCTGGACGATGTGGGCTGGATGGACGTCGGTTTTAACGGTGGCGGCGTGGCGGTGGGTAACCCTACACCAGATATCGACGCCGTTGCCAGCCAGGGGCTGATTTTAACTTCGGCGTATTCTCAACCAAGCTCTTCCCCAACCCGCGCCACCATTCTCACCGGACAATACTCCATCCACCACGGCATTCTGATGCCGCCAATGTACGGGCAACCGGGCGGGCTGCAAGGGTTAACCACGCTGCCGCAGTTGCTGCACGATCAGGGCTACGTCACTCAGGCCATCGGAAAATGGCATATGGGGGAAAACAAAGAGTCGCAGCCGCAGAACGTTGGCTTTGATGATTTCCGTGGCTTTAACTCGGTGTCTGATATGTACACCGAATGGCGCGACGTTCACGTCAATCCGGAAGTGGCCCTGAGTCCGGACCGTTCTGAATACATCAAGCAATTACCGTTCAGCAAAGATGACGTTCATGCGGTGCGCGGCGGCGAACAACAGGCCATTGCCGACATTACGCCGAAATATATGGAAGATCTGGATCAACGCTGGATGGACTATGGCGTTAAGTTCCTCGACAAGATGGCGAAGAGCGATAAACCATTCTTCCTCTACTACGGCACTCGTGGCTGCCACTTCGATAACTACCCAAATGCGAAATATGCGGGTAGCTCTCCGGCACGCACCTCGTATGGCGACTGCATGGTGGAGATGAACGATGTGTTCGCTAATCTGTATAAAACACTGGAGAAAAACGGTCAGCTTGATAACACGCTGATCGTCTTTACCTCCGATAACGGACCGGAAGCCGAAGTACCGCCGCACGGACGCACCCCGTTCCGTGGTGCGAAAGGTTCGACCTGGGAAGGCGGCGTTCGCGTACCGACTTTCGTTTACTGGAAAGGGATGATCCAACCGCGTAAATCTGACGGTATTGTCGATCTGGCAGATCTCTTCCCTACCGCGCTGGATCTGGCAGGGCATCCTGGAGCGAAAGTGGCGAATTTAGTGCCGAAAACCACCTTTATCGATGGTGTGGACCAGACATCCTTCTTCCTGGGAACAAATGGTCAGTCTAACCGTAAGGCCGAGCACTACTTCCTCAACGGTAAACTCGCTGCTGTGCGTATGGATGAGTTCAAGTATCACGTCCTGATTCAGCAACCTTACGCTTATACCCAGAGCGGATATCAGGGTGGATTCACCGGCACAGTAATGCAAACGGCGGGATCGTCGGTGTTTAACCTCTACACCGATCCGCAGGAAAGCGACTCCATCGGCGTGCGCCATATTCCGATGGGTGTACCGCTACAGACCGAAATGCACGCGTATATGGAGATCCTGAAAAAATATCCACCACGCGCGCAGATTAAATCTGACTAA", - "dna_sequence_length": 1656, - "functions": [ - "putative Ser-type periplasmic non-aryl sulfatase" - ], - "id": "CDS_3738", - "location": [ - [ - "NC_000913", - 3986007, - "-", - 1656 - ] - ], - "md5": "0325c65c3d7ac44533fb5ffb0fa77c7f", - "parent_gene": "", - "protein_md5": "f9084b6015014fd7f1d4ebb2832ca225", - "protein_translation": "MEFSFSPKRLVVAVAAALPLMASAADTPSTATARKGFAGYDHPNQYLVKPATTIADNMMPVMQHPAQDKETQQKLAELEKKTGKKPNVVVFLLDDVGWMDVGFNGGGVAVGNPTPDIDAVASQGLILTSAYSQPSSSPTRATILTGQYSIHHGILMPPMYGQPGGLQGLTTLPQLLHDQGYVTQAIGKWHMGENKESQPQNVGFDDFRGFNSVSDMYTEWRDVHVNPEVALSPDRSEYIKQLPFSKDDVHAVRGGEQQAIADITPKYMEDLDQRWMDYGVKFLDKMAKSDKPFFLYYGTRGCHFDNYPNAKYAGSSPARTSYGDCMVEMNDVFANLYKTLEKNGQLDNTLIVFTSDNGPEAEVPPHGRTPFRGAKGSTWEGGVRVPTFVYWKGMIQPRKSDGIVDLADLFPTALDLAGHPGAKVANLVPKTTFIDGVDQTSFFLGTNGQSNRKAEHYFLNGKLAAVRMDEFKYHVLIQQPYAYTQSGYQGGFTGTVMQTAGSSVFNLYTDPQESDSIGVRHIPMGVPLQTEMHAYMEILKKYPPRAQIKSD", - "protein_translation_length": 551, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418246.1" - ], - [ - "gene_synonym", - "GeneID:948311" - ], - [ - "gene_synonym", - "ECK3796" - ], - [ - "gene_synonym", - "ASAP:ABE-0012417" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACB7" - ], - [ - "gene_synonym", - "hemY" - ], - [ - "gene_synonym", - "GI:16131654" - ], - [ - "gene_synonym", - "b3802" - ], - [ - "gene_synonym", - "JW3774" - ], - [ - "gene_synonym", - "EcoGene:EG10434" - ] - ], - "dna_sequence": "ATGCTAAAAGTGTTATTGCTCTTTGTGTTGCTGATTGCGGGGATCGTGGTTGGCCCGATGATTGCCGGCCATCAGGGTTATGTGCTGATCCAGACCGACAACTACAATATCGAAACCAGCGTCACGGGCCTGGCGATCATATTGATTCTGGCGATGGTAGTGCTGTTTGCCATTGAGTGGCTACTGCGGCGGATCTTCCGCACTGGCGCGCACACCCGTGGGTGGTTTGTCGGACGTAAGCGTCGCCGTGCACGTAAGCAGACCGAACAGGCGCTGCTGAAACTGGCGGAAGGCGATTATCAGCAAGTTGAAAAGCTGATGGCGAAAAATGCCGATCACGCGGAACAACCGGTGGTGAACTATCTACTGGCTGCCGAAGCCGCGCAACAACGTGGTGATGAAGCACGCGCCAACCAACATCTGGAACGCGCAGCGGAGCTGGCCGGCAACGACACCATTCCGGTAGAAATCACCCGCGTACGTCTGCAACTGGCCCGTAATGAAAACCATGCTGCACGCCACGGCGTGGATAAGCTGCTGGAAGTTACGCCACGCCATCCGGAAGTATTACGTCTGGCGGAACAGGCGTATATCCGCACAGGTGCATGGAGTTCGCTGCTGGATATTATCCCATCAATGGCGAAAGCCCATGTTGGTGATGAAGAACATCGTGCAATGCTGGAACAACAGGCATGGATTGGCCTGATGGATCAGGCGCGTGCCGATAACGGTAGCGAAGGTTTGCGTAACTGGTGGAAAAACCAAAGCCGGAAAACGCGTCATCAGGTAGCGTTGCAGGTGGCAATGGCGGAACATCTTATTGAATGTGACGATCATGATACTGCCCAGCAAATTATCATCGATGGCCTGAAACGCCAGTACGACGATCGCCTACTGCTGCCGATTCCTCGACTGAAAACAAACAATCCGGAACAGCTGGAAAAAGTGCTGCGCCAGCAAATCAAAAACGTCGGCGATCGCCCGCTGTTGTGGAGCACACTGGGCCAGTCACTGATGAAGCACGGAGAATGGCAGGAAGCATCGCTCGCCTTCCGCGCAGCGCTGAAACAACGTCCGGACGCCTACGATTACGCATGGCTTGCCGACGCGCTGGACAGACTGCACAAGCCGGAAGAAGCTGCAGCTATGCGTCGCGACGGTTTGATGTTAACGTTGCAGAATAACCCGCCACAGTAG", - "dna_sequence_length": 1197, - "functions": [ - "putative protoheme IX synthesis protein" - ], - "id": "CDS_3739", - "location": [ - [ - "NC_000913", - 3987882, - "-", - 1197 - ] - ], - "md5": "72603bbaf289a0bb1ea6ce4940036ad6", - "parent_gene": "", - "protein_md5": "149fb7a87508140bd49dfb75a2489068", - "protein_translation": "MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDNYNIETSVTGLAIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQVEKLMAKNADHAEQPVVNYLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRVRLQLARNENHAARHGVDKLLEVTPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHVGDEEHRAMLEQQAWIGLMDQARADNGSEGLRNWWKNQSRKTRHQVALQVAMAEHLIECDDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPEQLEKVLRQQIKNVGDRPLLWSTLGQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADALDRLHKPEEAAAMRRDGLMLTLQNNPPQ", - "protein_translation_length": 398, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418247.1" - ], - [ - "gene_synonym", - "GeneID:948446" - ], - [ - "gene_synonym", - "ASAP:ABE-0012419" - ], - [ - "gene_synonym", - "EcoGene:EG10433" - ], - [ - "gene_synonym", - "ECK3797" - ], - [ - "gene_synonym", - "hemX" - ], - [ - "gene_synonym", - "GI:16131655" - ], - [ - "gene_synonym", - "b3803" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09127" - ], - [ - "gene_synonym", - "JW3775" - ] - ], - "dna_sequence": "ATGACGGAACAAGAAAAAACCTCCGCCGTGGTTGAAGAGACCAGGGAGGCCGTGGACACCACGTCACAACCTGTCGCAACAGAAAAAAAGAGTAAGAACAATACCGCATTGATTCTCAGCGCGGTGGCTATCGCTATTGCTCTGGCGGCGGGCATCGGTTTGTATGGCTGGGGTAAACAACAGGCCGTCAATCAGACCGCCACCAGCGATGCCCTGGCTAACCAACTGACGGCATTGCAAAAAGCCCAGGAGAGCCAAAAAGCCGAGCTGGAAGGCATTATTAAGCAACAAGCTGCACAACTTAAGCAGGCGAATCGTCAGCAAGAAACGCTGGCAAAACAGTTGGATGAAGTCCAACAAAAGGTCGCCACCATTTCCGGCAGCGATGCTAAAACCTGGCTGCTGGCTCAGGCCGATTTTCTGGTGAAACTCGCCGGACGGAAGCTGTGGAGCGATCAGGACGTCACGACCGCTGCAGCGTTGCTGAAAAGTGCAGACGCCAGCCTGGCGGATATGAATGACCCGAGTCTGATTACCGTTCGTCGGGCAATTACCGATGATATCGCCAGCCTTTCTGCAGTATCGCAGGTGGATTATGACGGCATCATCCTTAAGCTTAATCAGCTTTCAAATCAGGTAGATAACCTGCGTCTGGCCGATAATGACAGCGATGGTTCGCCGATGGATTCAGACGGTGAAGAGCTTTCCAGTTCCATCAGCGAATGGCGTATCAATCTGCAAAAAAGCTGGCAGAACTTTATGGACAACTTCATTACGATTCGCCGTCGTGATGACACCGCCGTACCGCTGTTAGCGCCAAATCAGGATATCTATCTGCGCGAAAATATTCGCTCTCGCCTGCTGGTCGCAGCACAAGCTGTACCGCGTCACCAGGAAGAGACTTATCGCCAGGCGCTGGAGAACGTCTCCACCTGGGTACGTGCTTACTACGATACTGATGATGCCACCACCAAAGCGTTCCTCGACGAGGTGGACCAGTTAAGCCAGCAAAATATCTCGATGGATCTTCCGGAAACCCTGCAAAGCCAGGCGATGCTGGAAAAACTGATGCAGACTCGCGTGCGTAACCTGCTGGCACAACCGGCAGCGGGGACAACGGAAGCTAAACCTGCACCTGCACCGCAAGCTGATACTCCGGCAGCCGCGCCGCAAGGAGAATAA", - "dna_sequence_length": 1182, - "functions": [ - "putative uroporphyrinogen III methyltransferase" - ], - "id": "CDS_3740", - "location": [ - [ - "NC_000913", - 3989066, - "-", - 1182 - ] - ], - "md5": "b495df143d68a03830e48468a6ac7daf", - "parent_gene": "", - "protein_md5": "ae73e0483e8bfc4a241ff6133c934787", - "protein_translation": "MTEQEKTSAVVEETREAVDTTSQPVATEKKSKNNTALILSAVAIAIALAAGIGLYGWGKQQAVNQTATSDALANQLTALQKAQESQKAELEGIIKQQAAQLKQANRQQETLAKQLDEVQQKVATISGSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAALLKSADASLADMNDPSLITVRRAITDDIASLSAVSQVDYDGIILKLNQLSNQVDNLRLADNDSDGSPMDSDGEELSSSISEWRINLQKSWQNFMDNFITIRRRDDTAVPLLAPNQDIYLRENIRSRLLVAAQAVPRHQEETYRQALENVSTWVRAYYDTDDATTKAFLDEVDQLSQQNISMDLPETLQSQAMLEKLMQTRVRNLLAQPAAGTTEAKPAPAPQADTPAAAPQGE", - "protein_translation_length": 393, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418248.1" - ], - [ - "gene_synonym", - "ECK3798" - ], - [ - "gene_synonym", - "GeneID:948587" - ], - [ - "gene_synonym", - "hemD" - ], - [ - "gene_synonym", - "GI:16131656" - ], - [ - "gene_synonym", - "b3804" - ], - [ - "gene_synonym", - "EcoGene:EG10430" - ], - [ - "gene_synonym", - "ASAP:ABE-0012425" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09126" - ], - [ - "gene_synonym", - "JW3776" - ] - ], - "dna_sequence": "ATGAGTATCCTTGTCACCCGCCCGTCTCCCGCTGGAGAAGAGTTAGTGAGCCGTCTGCGCACACTGGGGCAGGTGGCCTGGCATTTTCCGCTGATTGAGTTTTCTCCGGGTCAACAATTACCGCAACTTGCTGATCAACTGGCAGCGCTGGGGGAGAGCGATCTGTTGTTTGCCCTCTCGCAACACGCGGTTGCTTTTGCCCAATCACAGCTGCATCAGCAAGATCGTAAATGGCCCCGACTACCTGATTATTTCGCCATTGGACGCACCACCGCACTGGCACTACATACCGTAAGTGGACAGAAGATTCTCTACCCGCAGGATCGGGAAATCAGCGAAGTCTTGCTACAATTACCTGAATTACAAAATATTGCGGGCAAACGTGCGCTGATATTACGTGGCAATGGTGGTCGTGAGCTAATTGGGGATACCCTGACGGCGCGCGGTGCTGAGGTCACTTTTTGTGAATGTTATCAACGATGCGCAATCCATTACGATGGTGCAGAAGAAGCGATGCGCTGGCAAGCCCGCGAGGTGACGATGGTCGTTGTTACCAGCGGTGAAATGTTGCAGCAACTCTGGTCGCTGATCCCACAATGGTATCGTGAGCACTGGTTACTACACTGTCGACTATTGGTCGTCAGTGAGCGTTTGGCGAAACTCGCCCGGGAACTGGGCTGGCAAGACATTAAGGTCGCCGATAACGCTGACAACGATGCGCTTTTACGGGCATTACAATAA", - "dna_sequence_length": 741, - "functions": [ - "uroporphyrinogen III synthase" - ], - "id": "CDS_3741", - "location": [ - [ - "NC_000913", - 3989828, - "-", - 741 - ] - ], - "md5": "4b0ad72e5cffc05520f8d1b5b174761e", - "parent_gene": "", - "protein_md5": "2bdb56bd10d40c90391ee7b0246b6286", - "protein_translation": "MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPELQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQAREVTMVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDALLRALQ", - "protein_translation_length": 246, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:947759" - ], - [ - "gene_synonym", - "ECK3799" - ], - [ - "gene_synonym", - "ASAP:ABE-0012427" - ], - [ - "gene_synonym", - "popE" - ], - [ - "gene_synonym", - "hemC" - ], - [ - "gene_synonym", - "JW5932" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06983" - ], - [ - "gene_synonym", - "YP_026260.1" - ], - [ - "gene_synonym", - "GI:49176416" - ], - [ - "gene_synonym", - "EcoGene:EG10429" - ], - [ - "gene_synonym", - "b3805" - ] - ], - "dna_sequence": "ATGTTAGACAATGTTTTAAGAATTGCCACACGCCAAAGCCCACTTGCACTCTGGCAGGCACACTATGTCAAAGACAAGTTGATGGCGAGCCATCCGGGCCTGGTCGTTGAACTGGTACCGATGGTGACGCGCGGCGATGTGATTCTTGATACGCCGCTGGCGAAAGTAGGCGGAAAAGGCTTATTTGTAAAAGAGCTGGAAGTCGCGCTCCTCGAAAATCGCGCCGATATCGCCGTACACTCAATGAAAGATGTGCCGGTTGAATTCCCGCAAGGTCTGGGACTGGTCACTATTTGTGAGCGTGAAGATCCTCGCGATGCCTTTGTGTCCAATAACTATGACAGTCTGGATGCGTTACCGGCAGGCAGTATCGTCGGGACGTCCAGTTTACGTCGCCAGTGCCAACTGGCTGAACGCCGTCCGGATCTGATTATCCGCTCCCTGCGCGGCAACGTCGGCACTCGCCTGAGCAAACTGGATAACGGCGAATACGATGCCATCATTCTTGCCGTAGCCGGACTAAAACGTTTAGGTCTGGAGTCACGTATTCGCGCCGCGTTGCCACCCGAGATTTCTCTTCCGGCGGTAGGACAAGGTGCGGTGGGTATTGAATGCCGCCTTGATGATTCACGCACTCGCGAGCTGCTTGCCGCGCTGAATCACCACGAAACTGCACTGCGCGTTACCGCAGAACGCGCCATGAATACCCGTCTCGAAGGCGGATGTCAGGTGCCAATTGGTAGCTACGCCGAGCTTATTGATGGCGAAATCTGGCTGCGTGCGCTGGTCGGCGCGCCGGACGGTTCGCAGATTATTCGCGGTGAACGCCGCGGTGCGCCGCAAGATGCCGAACAAATGGGGATTTCGCTGGCAGAAGAGCTACTGAATAACGGCGCGCGCGAGATCCTCGCTGAAGTCTATAACGGAGACGCCCCGGCATGA", - "dna_sequence_length": 942, - "functions": [ - "hydroxymethylbilane synthase" - ], - "id": "CDS_3742", - "location": [ - [ - "NC_000913", - 3990766, - "-", - 942 - ] - ], - "md5": "61cecbc3b88eafef7e6e9d79dd6d5a06", - "parent_gene": "", - "protein_md5": "e821f2f40f67955d52f2418a6c928b16", - "protein_translation": "MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA", - "protein_translation_length": 313, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418250.1" - ], - [ - "gene_synonym", - "GeneID:947755" - ], - [ - "gene_synonym", - "ASAP:ABE-0012432" - ], - [ - "gene_synonym", - "JW3778" - ], - [ - "gene_synonym", - "cya" - ], - [ - "gene_synonym", - "ECK3800" - ], - [ - "gene_synonym", - "cyaA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00936" - ], - [ - "gene_synonym", - "EcoGene:EG10170" - ], - [ - "gene_synonym", - "GI:16131658" - ], - [ - "gene_synonym", - "b3806" - ] - ], - "dna_sequence": "TTGTACCTCTATATTGAGACTCTGAAACAGAGACTGGATGCCATAAATCAATTGCGTGTGGATCGCGCGCTTGCTGCTATGGGGCCTGCATTCCAACAGGTCTACAGTCTACTGCCGACATTGTTGCACTATCACCATCCGCTAATGCCGGGTTACCTTGATGGTAACGTTCCCAAAGGCATTTGCCTTTACACGCCTGATGAAACTCAACGCCACTACCTGAACGAGCTTGAACTGTATCGTGGAATGTCAGTACAGGATCCGCCGAAAGGTGAGCTTCCAATTACTGGTGTATACACCATGGGCAGCACCTCGTCCGTAGGGCAAAGTTGTTCCTCTGACCTGGATATCTGGGTCTGTCATCAATCCTGGCTCGATAGCGAAGAGCGCCAATTGCTACAACGTAAATGTAGCCTGCTGGAAAACTGGGCCGCCTCGCTGGGTGTGGAAGTCAGCTTCTTCCTGATTGATGAAAACCGCTTCCGTCATAATGAAAGCGGCAGCCTGGGGGGCGAAGATTGTGGCTCCACCCAGCATATACTGCTGCTTGACGAATTTTATCGTACCGCCGTGCGTCTCGCCGGTAAGCGTATTCTGTGGAATATGGTGCCGTGCGACGAAGAAGAGCATTACGACGACTATGTGATGACGCTTTACGCGCAGGGCGTGCTGACGCCAAATGAATGGCTGGATCTCGGTGGCTTAAGCTCGCTTTCTGCTGAAGAGTACTTTGGTGCCAGCCTTTGGCAGCTCTACAAGAGTATCGATTCCCCATACAAAGCGGTACTGAAAACACTGCTGCTGGAAGCCTATTCCTGGGAATACCCGAACCCACGTCTGCTGGCGAAAGATATCAAACAGCGTTTGCACGACGGCGAGATTGTATCGTTTGGTCTCGATCCATACTGCATGATGCTGGAGCGTGTTACTGAATACCTGACGGCGATTGAAGATTTTACCCGTCTGGATTTAGTACGTCGCTGCTTCTATTTAAAAGTGTGCGAAAAGCTCAGCCGTGAACGCGCCTGCGTAGGCTGGCGTCGCGCAGTGTTGAGCCAGTTAGTGAGCGAGTGGGGTTGGGACGAAGCTCGTCTGGCAATGCTCGATAACCGCGCTAACTGGAAGATTGATCAGGTGCGTGAGGCGCACAACGAGTTGCTCGACGCGATGATGCAGAGCTACCGTAATCTGATCCGCTTTGCGCGTCGCAATAACCTTAGCGTCTCCGCCAGTCCGCAGGATATCGGCGTGCTGACGCGTAAGCTGTATGCCGCGTTTGAAGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCACTTCAACGGCGAGCAATCGATGATCGAAGCCCTGAAAACTATTCTCGGCAAAATGCATCAGGACGCCGCACCGCCAGATAGCGTGGAAGTCTTCTGTTATAGCCAGCATCTGCGCGGCTTAATTCGTACTCGCGTGCAGCAACTGGTTTCTGAGTGTATTGAATTGCGTCTTTCCAGCACCCGCCAGGAAACCGGGCGTTTCAAGGCGCTGCGCGTTTCTGGTCAAACCTGGGGGTTGTTCTTCGAACGCCTGAATGTATCGGTACAGAAACTGGAAAACGCCATCGAGTTTTATGGCGCGATTTCGCATAACAAACTGCACGGCCTGTCAGTGCAGGTTGAAACCAATCACGTCAAATTACCGGCGGTGGTGGACGGCTTTGCCAGCGAAGGGATCATCCAGTTCTTTTTCGAAGAAACGCAAGACGAGAATGGCTTTAATATCTACATTCTCGACGAAAGCAACCGGGTTGAGGTATATCACCACTGCGAAGGCAGCAAAGAGGAGCTGGTACGTGACGTCAGTCGCTTCTACTCGTCATCGCATGACCGTTTTACCTACGGCTCAAGCTTCATCAACTTCAACCTGCCGCAGTTCTATCAGATTGTGAAGGTTGATGGTCGTGAACAGGTGATTCCGTTCCGCACAAAATCTATCGGTAACATGCCGCCTGCCAATCAGGATCACGATACGCCGCTATTACAGCAATATTTTTCGTGA", 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"MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHYHHPLMPGYLDGNVPKGICLYTPDETQRHYLNELELYRGMSVQDPPKGELPITGVYTMGSTSSVGQSCSSDLDIWVCHQSWLDSEERQLLQRKCSLLENWAASLGVEVSFFLIDENRFRHNESGSLGGEDCGSTQHILLLDEFYRTAVRLAGKRILWNMVPCDEEEHYDDYVMTLYAQGVLTPNEWLDLGGLSSLSAEEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYPNPRLLAKDIKQRLHDGEIVSFGLDPYCMMLERVTEYLTAIEDFTRLDLVRRCFYLKVCEKLSRERACVGWRRAVLSQLVSEWGWDEARLAMLDNRANWKIDQVREAHNELLDAMMQSYRNLIRFARRNNLSVSASPQDIGVLTRKLYAAFEALPGKVTLVNPQISPDLSEPNLTFIYVPPGRANRSGWYLYNRAPNIESIISHQPLEYNRYLNKLVAWAWFNGLLTSRTRLYIKGNGIVDLPKLQEMVADVSHHFPLRLPAPTPKALYSPCEIRHLAIIVNLEYDPTAAFRNQVVHFDFRKLDVFSFGENQNCLVGSVDLLYRNSWNEVRTLHFNGEQSMIEALKTILGKMHQDAAPPDSVEVFCYSQHLRGLIRTRVQQLVSECIELRLSSTRQETGRFKALRVSGQTWGLFFERLNVSVQKLENAIEFYGAISHNKLHGLSVQVETNHVKLPAVVDGFASEGIIQFFFEETQDENGFNIYILDESNRVEVYHHCEGSKEELVRDVSRFYSSSHDRFTYGSSFINFNLPQFYQIVKVDGREQVIPFRTKSIGNMPPANQDHDTPLLQQYFS", - "protein_translation_length": 848, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27838" - ], - [ - "gene_synonym", - "NP_418251.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012435" - ], - [ - "gene_synonym", - "EcoGene:EG11653" - ], - [ - "gene_synonym", - "cyaY" - ], - [ - "gene_synonym", - "GeneID:947754" - ], - [ - "gene_synonym", - "JW3779" - ], - [ - "gene_synonym", - "ECK3801" - ], - [ - "gene_synonym", - "GI:16131659" - ], - [ - "gene_synonym", - "b3807" - ] - ], - "dna_sequence": "ATGAACGACAGTGAATTTCATCGCCTGGCTGATCAACTCTGGCTGACCATTGAAGAACGCCTGGACGACTGGGATGGCGACAGCGATATCGACTGCGAAATCAACGGCGGCGTACTGACCATTACCTTTGAGAATGGCAGCAAAATCATTATCAACCGCCAGGAGCCGCTGCACCAGGTATGGCTGGCAACCAAACAGGGCGGCTACCATTTTGACCTGAAAGGCGATGAGTGGATTTGTGATCGCAGCGGCGAAACCTTCTGGGATTTGCTGGAACAGGCGGCGACGCAGCAGGCGGGTGAAACAGTCAGTTTCCGCTAA", - "dna_sequence_length": 321, - "functions": [ - "iron-dependent inhibitor of iron-sulfur cluster formation", - "frataxin", - "iron-binding and oxidizing protein" - ], - "id": "CDS_3744", - "location": [ - [ - "NC_000913", - 3994059, - "-", - 321 - ] - ], - "md5": "31aa247f48d5e5e831eff4abd0b82f13", - "parent_gene": "", - "protein_md5": "361a48ee9873e2216b08d9cc6b57f9e9", - "protein_translation": "MNDSEFHRLADQLWLTIEERLDDWDGDSDIDCEINGGVLTITFENGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGETVSFR", - "protein_translation_length": 106, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADN6" - ], - [ - "gene_synonym", - "YP_588473.1" - ], - [ - "gene_synonym", - "ECK3803" - ], - [ - "gene_synonym", - "GeneID:1450304" - ], - [ - "gene_synonym", - "yifL" - ], - [ - "gene_synonym", - "b4558" - ], - [ - "gene_synonym", - "ASAP:ABE-0285079" - ], - [ - "gene_synonym", - "JW3781" - ], - [ - "gene_synonym", - "GI:94541130" - ], - [ - "gene_synonym", - "EcoGene:EG12353" - ] - ], - "dna_sequence": "ATGAAAAACGTGTTTAAGGCACTCACTGTATTACTTACTCTCTTCAGCCTGACGGGCTGCGGTCTGAAAGGTCCGCTCTATTTCCCGCCTGCAGATAAAAACGCACCGCCGCCGACCAAACCGGTAGAGACGCAAACGCAATCCACGGTGCCGGATAAAAACGATCGCGCCACTGGCGATGGTCCATCCCAGGTGAATTACTAA", - "dna_sequence_length": 204, - "functions": [ - "putative lipoprotein" - ], - "id": "CDS_3745", - "location": [ - [ - "NC_000913", - 3994522, - "+", - 204 - ] - ], - "md5": "dd6dd9b7e4e5d200f26a59cf589e2b9d", - "parent_gene": "", - "protein_md5": "dc343b156af7733f266206c0e34d4d10", - "protein_translation": "MKNVFKALTVLLTLFSLTGCGLKGPLYFPPADKNAPPPTKPVETQTQSTVPDKNDRATGDGPSQVNY", - "protein_translation_length": 67, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948364" - ], - [ - "gene_synonym", - "GI:90111650" - ], - [ - "gene_synonym", - "EcoGene:EG10209" - ], - [ - "gene_synonym", - "NP_418254.2" - ], - [ - "gene_synonym", - "dapF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6K1" - ], - [ - "gene_synonym", - "ECK3804" - ], - [ - "gene_synonym", - "b3809" - ], - [ - "gene_synonym", - "ASAP:ABE-0012442" - ], - [ - "gene_synonym", - "JW5592" - ] - ], - "dna_sequence": "ATGCAGTTCTCGAAAATGCATGGCCTTGGCAACGATTTTATGGTCGTCGACGCGGTAACGCAGAATGTCTTTTTTTCACCGGAGCTGATTCGTCGCCTGGCTGATCGGCACCTGGGGGTAGGGTTTGACCAACTGCTGGTGGTTGAGCCGCCGTATGATCCTGAACTGGATTTTCACTATCGCATTTTCAATGCTGATGGCAGTGAAGTGGCGCAGTGCGGCAACGGTGCGCGCTGCTTTGCCCGTTTTGTGCGTCTGAAAGGACTGACCAATAAGCGTGATATCCGCGTCAGCACCGCCAACGGGCGGATGGTTCTGACCGTCACCGATGATGATCTGGTCCGCGTAAATATGGGCGAACCCAACTTCGAACCTTCCGCCGTGCCGTTTCGCGCTAACAAAGCGGAAAAGACCTATATTATGCGCGCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTACGCGTTTATGAGCGTGGGGCAGGAGAAACCCAGGCCTGCGGCAGCGGCGCGTGTGCGGCGGTTGCAGTAGGGATTCAGCAAGGTTTGCTGGCCGAAGAAGTACGCGTGGAACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGA", - "dna_sequence_length": 825, - "functions": [ - "diaminopimelate epimerase" - ], - "id": "CDS_3746", - "location": [ - [ - "NC_000913", - 3994762, - "+", - 825 - ] - ], - "md5": "324fc6fa972cde521c55f16a4e8924d5", - "parent_gene": "", - "protein_md5": "8a2d9e50c5c8f8c6aa8d3d35d6818e19", - "protein_translation": "MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL", - "protein_translation_length": 274, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11201" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23305" - ], - [ - "gene_synonym", - "yigA" - ], - [ - "gene_synonym", - "JW3783" - ], - [ - "gene_synonym", - "ECK3805" - ], - [ - "gene_synonym", - "ASAP:ABE-0012444" - ], - [ - "gene_synonym", - "GeneID:948359" - ], - [ - "gene_synonym", - "GI:16131662" - ], - [ - "gene_synonym", - "NP_418255.1" - ], - [ - "gene_synonym", - "b3810" - ] - ], - "dna_sequence": "ATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCGGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCACGTAATCATATTCATGTTCTGGAAGAGAACATGGCGCTGTTGATGGAACAGGCTATCGCCAACGAAGGCCTGTTTTATCGCCTACTCTACCTGCAGCGCAGTCTCACCGCCGCCAGCAGTCTCGACGATATGCTGATGCGCTTTCACCGCTGGGCGCGCGATCTCGGCCTGGCAGGTGCGAGTCTGCGCCTGTTTCCGGATCGCTGGCGCTTAGGTGCGCCGTCGAACCACACTCATCTGGCATTAAGCCGTCAGTCTTTCGAACCGCTGCGTATTCAGCGTTTGGGGCAGGAACAGCACTATCTTGGGCCGCTTAACGGACCAGAGCTGCTGGTGGTGCTACCGGAAGCGAAAGCGGTGGGATCGGTGGCGATGTCGATGCTGGGAAGCGATGCTGATTTGGGTGTCGTGCTGTTTACCAGTCGCGATGCCAGTCACTATCAACAAGGGCAAGGAACGCAGTTACTTCATGAAATTGCGCTGATGTTGCCGGAGCTTCTGGAGCGTTGGATTGAACGCGTATGA", - "dna_sequence_length": 708, - "functions": [ - "DUF484 family protein" - ], - "id": "CDS_3747", - "location": [ - [ - "NC_000913", - 3995583, - "+", - 708 - ] - ], - "md5": "3ed62d40d7612d141bf0f71ebd5b5033", - "parent_gene": "", - "protein_md5": "d218bc05c06dbbc0aa77508fc93792a1", - "protein_translation": "MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV", - "protein_translation_length": 235, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8P6" - ], - [ - "gene_synonym", - "JW3784" - ], - [ - "gene_synonym", - "EcoGene:EG11069" - ], - [ - "gene_synonym", - "b3811" - ], - [ - "gene_synonym", - "ECK3806" - ], - [ - "gene_synonym", - "NP_418256.1" - ], - [ - "gene_synonym", - "xerC" - ], - [ - "gene_synonym", - "GeneID:948355" - ], - [ - "gene_synonym", - "GI:16131663" - ], - [ - "gene_synonym", - "ASAP:ABE-0012448" - ] - ], - "dna_sequence": "ATGACCGATTTACACACCGATGTAGAACGCTACCTACGTTATCTGAGCGTGGAGCGCCAGCTTAGCCCGATAACCCTGCTTAACTACCAGCGTCAGCTTGAGGCGATCATCAATTTTGCCAGCGAAAACGGCCTGCAAAGCTGGCAGCAATGTGATGTGACGATGGTGCGCAATTTTGCTGTACGCAGTCGCCGTAAAGGGCTGGGAGCAGCAAGTCTGGCGTTACGGCTTTCTGCGCTACGTAGCTTTTTTGACTGGCTGGTCAGCCAGAACGAACTCAAAGCTAACCCGGCGAAAGGTGTTTCGGCACCGAAAGCGCCGCGTCATCTGCCGAAAAACATCGACGTCGACGATATGAATCGGCTGCTGGATATTGATATCAATGATCCCCTCGCTGTACGCGACCGTGCAATGCTGGAAGTGATGTACGGCGCGGGTCTGCGTCTTTCTGAGCTGGTGGGGCTGGATATTAAACACCTCGACCTGGAGTCTGGTGAAGTGTGGGTTATGGGGAAAGGCAGCAAAGAGCGCCGCCTGCCGATTGGTCGCAACGCTGTGGCGTGGATTGAGCACTGGCTTGATTTGCGCGACCTGTTTGGTAGCGAAGACGACGCGCTTTTTCTGTCGAAACTGGGCAAGCGTATCTCCGCGCGTAATGTGCAGAAACGCTTTGCCGAATGGGGCATAAAACAAGGGCTGAATAATCACGTTCATCCGCATAAATTACGTCACTCGTTCGCCACGCATATGCTGGAGTCGAGCGGCGATCTTCGTGGTGTGCAGGAGCTGCTGGGTCATGCCAACCTCTCCACCACGCAAATCTATACTCATCTTGATTTTCAACACCTTGCCTCGGTGTACGATGCGGCGCATCCACGCGCCAAACGGGGGAAATAA", - "dna_sequence_length": 897, - "functions": [ - "site-specific tyrosine recombinase" - ], - "id": "CDS_3748", - "location": [ - [ - "NC_000913", - 3996287, - "+", - 897 - ] - ], - "md5": "f6011e68172ffd6c6157161114bab5dc", - "parent_gene": "", - "protein_md5": "4b6949c8ccdfec49489082e4f8b4deb1", - "protein_translation": "MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIINFASENGLQSWQQCDVTMVRNFAVRSRRKGLGAASLALRLSALRSFFDWLVSQNELKANPAKGVSAPKAPRHLPKNIDVDDMNRLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHLDLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISARNVQKRFAEWGIKQGLNNHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKRGK", - "protein_translation_length": 298, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11202" - ], - [ - "gene_synonym", - "yigB" - ], - [ - "gene_synonym", - "GeneID:948357" - ], - [ - "gene_synonym", - "NP_418257.1" - ], - [ - "gene_synonym", - "JW3785" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADP0" - ], - [ - "gene_synonym", - "ECK3807" - ], - [ - "gene_synonym", - "ASAP:ABE-0012450" - ], - [ - "gene_synonym", - "b3812" - ], - [ - "gene_synonym", - "GI:16131664" - ] - ], - "dna_sequence": "ATGCGTTTTTACCGGCCTTTGGGGCGCATCTCGGCGCTCACCTTTGACCTGGATGATACCCTTTACGATAACCGTCCGGTGATTTTGCGCACCGAGCGAGAGGCGCTTACCTTTGTGCAAAATTATCATCCGGCGCTGCGCAGCTTCCAGAATGAAGATCTGCAACGCCTGCGCCAGGCGGTACGGGAAGCGGAACCCGAGATTTATCACGACGTGACGCGCTGGCGTTTTCGTTCGATTGAACAAGCGATGCTCGACGCCGGGCTGAGTGCCGAAGAAGCCAGTGCAGGCGCACACGCAGCAATGATCAACTTTGCCAAATGGCGCAGCCGAATCGACGTCCCGCAGCAAACTCACGACACCTTAAAACAGCTGGCGAAGAAATGGCCGCTGGTGGCGATCACCAACGGTAACGCCCAGCCGGAGCTGTTTGGTTTGGGGGATTATTTTGAGTTTGTGCTGCGCGCTGGCCCGCACGGGCGCTCAAAACCGTTCAGCGATATGTACTTTTTGGCTGCGGAAAAACTCAACGTGCCGATCGGCGAGATCTTACATGTTGGGGACGATCTCACCACTGACGTGGGTGGGGCAATTCGCAGCGGAATGCAGGCTTGTTGGATCAGACCGGAAAATGGCGATCTGATGCAAACCTGGGACAGCCGTTTACTGCCGCATCTGGAAATTTCCCGGTTGGCATCTCTGACCTCGCTGATATAA", - "dna_sequence_length": 717, - "functions": [ - "5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase", - "pyrimidine phosphatase", - "riboflavin synthesis" - ], - "id": "CDS_3749", - "location": [ - [ - "NC_000913", - 3997183, - "+", - 717 - ] - ], - "md5": "287b637dbd50b3c061215af57d692b95", - "parent_gene": "", - "protein_md5": "cd9da0cb6e8b5fa40b63fb915baf0b61", - "protein_translation": "MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHPALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAMINFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHGRSKPFSDMYFLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTWDSRLLPHLEISRLASLTSLI", - "protein_translation_length": 238, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "dar-2" - ], - [ - "gene_synonym", - "rad" - ], - [ - "gene_synonym", - "GeneID:948347" - ], - [ - "gene_synonym", - "recL" - ], - [ - "gene_synonym", - "ECK3808" - ], - [ - "gene_synonym", - "srjC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03018" - ], - [ - "gene_synonym", - "uvr502" - ], - [ - "gene_synonym", - "pdeB" - ], - [ - "gene_synonym", - "JW3786" - ], - [ - "gene_synonym", - "ASAP:ABE-0012455" - ], - [ - "gene_synonym", - "uvrE" - ], - [ - "gene_synonym", - "mutU" - ], - [ - "gene_synonym", - "NP_418258.1" - ], - [ - "gene_synonym", - "b3813" - ], - [ - "gene_synonym", - "uvrD" - ], - [ - "gene_synonym", - "EcoGene:EG11064" - ], - [ - "gene_synonym", - "dda" - ], - [ - "gene_synonym", - "GI:16131665" - ] - ], - "dna_sequence": "ATGGACGTTTCTTACCTGCTCGACAGCCTTAATGACAAACAGCGCGAAGCGGTGGCCGCGCCACGCAGCAACCTTCTGGTGCTGGCGGGCGCGGGCAGTGGTAAGACGCGCGTACTGGTGCATCGTATCGCCTGGTTGATGAGCGTGGAAAACTGCTCGCCATACTCGATTATGGCGGTGACGTTTACCAACAAAGCGGCGGCGGAGATGCGTCATCGTATCGGGCAACTGATGGGCACGAGCCAGGGCGGTATGTGGGTCGGCACCTTCCACGGGCTGGCGCACCGTTTGCTGCGTGCGCACCATATGGACGCCAATCTGCCGCAGGATTTCCAGATCCTCGACAGTGAAGACCAGCTACGCCTGCTTAAGCGTCTGATCAAAGCCATGAACCTCGACGAGAAGCAGTGGCCGCCGCGGCAGGCAATGTGGTACATCAACAGCCAGAAAGATGAAGGCCTGCGTCCGCATCATATTCAAAGCTACGGTAATCCGGTGGAGCAGACCTGGCAGAAGGTGTATCAGGCGTATCAGGAAGCGTGTGACCGCGCGGGCCTGGTGGACTTCGCCGAGCTGCTGCTGCGCGCTCACGAGTTGTGGCTTAACAAGCCGCATATCCTGCAACACTACCGCGAACGTTTTACCAATATCCTGGTGGACGAATTCCAGGATACCAACAACATTCAGTACGCGTGGATCCGCCTGCTGGCGGGCGACACCGGCAAAGTGATGATCGTCGGTGATGACGACCAGTCAATCTACGGCTGGCGCGGGGCGCAGGTGGAGAATATTCAGCGTTTCCTTAATGATTTCCCCGGTGCCGAAACTATTCGTCTGGAGCAAAACTACCGCTCTACCAGCAATATTCTGAGCGCCGCTAACGCCCTGATTGAAAACAATAACGGGCGTCTGGGTAAAAAACTGTGGACCGATGGCGCGGACGGTGAGCCTATTTCCCTCTATTGCGCTTTTAACGAACTCGATGAAGCGCGTTTTGTGGTTAACCGCATCAAAACCTGGCAGGACAACGGCGGAGCGCTTGCCGAGTGCGCCATTCTCTACCGCAGCAACGCCCAGTCGCGGGTGCTCGAAGAGGCGTTATTGCAGGCCAGTATGCCGTACCGTATTTACGGCGGGATGCGCTTCTTCGAACGCCAGGAAATCAAAGATGCGCTCTCGTATCTGCGCCTGATTGCCAACCGCAACGACGACGCGGCCTTTGAGCGTGTGGTGAATACGCCAACGCGGGGTATTGGTGACCGGACGCTGGACGTGGTACGTCAGACATCGCGCGATCGCCAGTTAACACTCTGGCAGGCATGTCGTGAGCTGTTGCAGGAAAAAGCCCTCGCCGGGCGAGCTGCCAGCGCCTTGCAGCGATTTATGGAATTAATCGACGCCTTAGCGCAGGAAACTGCCGATATGCCGCTGCATGTACAGACTGACCGGGTAATTAAAGACTCCGGCCTGCGTACCATGTATGAGCAGGAGAAGGGCGAAAAAGGTCAGACGCGTATCGAAAACTTAGAGGAACTGGTGACGGCAACGCGCCAGTTCAGCTACAACGAAGAAGACGAAGATTTAATGCCGCTGCAGGCGTTCCTCTCCCATGCGGCACTGGAAGCAGGTGAAGGGCAGGCGGATACCTGGCAGGATGCGGTGCAGTTGATGACGCTACACTCGGCGAAAGGCCTGGAGTTCCCGCAGGTGTTTATCGTTGGTATGGAAGAGGGCATGTTCCCAAGCCAGATGTCGCTGGATGAAGGCGGGCGTCTGGAAGAAGAACGCCGTCTGGCCTACGTTGGCGTAACCCGCGCGATGCAGAAACTGACGCTGACCTACGCGGAAACCCGCCGTCTGTATGGTAAAGAGGTTTACCATCGCCCGTCGCGCTTTATCGGCGAGCTGCCGGAAGAGTGTGTGGAAGAGGTGCGCCTGCGCGCCACGGTAAGCCGCCCGGTCAGCCATCAGCGGATGGGTACGCCGATGGTCGAGAACGACAGCGGCTACAAGCTCGGCCAGCGCGTACGCCACGCTAAGTTTGGTGAAGGCACCATTGTCAATATGGAAGGCAGCGGTGAGCATAGCCGTTTGCAGGTGGCATTTCAGGGCCAGGGTATTAAATGGCTGGTGGCGGCATACGCCCGGCTGGAGTCGGTGTAA", 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"MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV", - "protein_translation_length": 720, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yigE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27840" - ], - [ - "gene_synonym", - "EcoGene:EG11462" - ], - [ - "gene_synonym", - "b4482" - ], - [ - "gene_synonym", - "YP_026261.1" - ], - [ - "gene_synonym", - "GI:49176417" - ], - [ - "gene_synonym", - "ASAP:ABE-0174110" - ], - [ - "gene_synonym", - "JW5591" - ], - [ - "gene_synonym", - "ECK3809" - ], - [ - "gene_synonym", - "GeneID:2847679" - ] - ], - "dna_sequence": "ATGGCGCATCAGCTACTCATTGGTAAAGGAATGATCACCTTGAATCTCAAACGGATTTTTCTCGCCCTCACCTTACTTCCCTTGTTTGCTGTTGCCGCTGATGATTGCGCACTCTCAGATCCGACGCTGACCGTACAGGCGTATACCGTTAATCCTCAAACAGAGCGGGTGAAAATGTACTGGCAAAAAGCCAATGGCGAAGCGTGGGGAACGTTACATGCTCTGCTGGCGGATATTAATAGTCAGGGTCAGGTGCAGATGGCGATGAACGGCGGCATCTATGATGAAAGCTATGCGCCGCTCGGTTTGTACATCGAAAACGGTCAGCAGAAGGTGGCGTTAAATCTCGCTTCAGGTGAAGGGAATTTCTTTATCCGTCCTGGCGGCGTGTTTTATGTCGCGGGAGATAAAGTCGGCATCGTTCGTCTGGATGCCTTCAAAACCAGTAAAGAGATTCAGTTTGCGGTGCAGTCAGGGCCAATGTTGATGGAAAACGGTGTAATTAATCCGCGTATTCATCCCAACGTCGCCTCAAGCAAAATTCGTAACGGTGTTGGGATTAATAAACATGGGAACGCCGTGTTTTTGTTGAGCCAGCAGGCAACAAATTTTTATGATTTTGCCTGTTATGCCAAAGCGAAACTGAACGTTGAGCAGCTGCTTTATCTTGATGGCACGATTTCACATATGTATATGAAAGGCGGGGCAATCCCGTGGCAACGCTATCCTTTTGTCACCATGATTTCCGTCGAGCGGAAAGGTTAA", - "dna_sequence_length": 765, - "functions": [ - "DUF2233 family protein" - ], - "id": "CDS_3751", - "location": [ - [ - "NC_000913", - 4001056, - "-", - 765 - ] - ], - "md5": "cdd62435d10dc021f8407262887f9bd9", - "parent_gene": "", - "protein_md5": "4f1d2b86593d0827cac0b1892695e408", - "protein_translation": "MAHQLLIGKGMITLNLKRIFLALTLLPLFAVAADDCALSDPTLTVQAYTVNPQTERVKMYWQKANGEAWGTLHALLADINSQGQVQMAMNGGIYDESYAPLGLYIENGQQKVALNLASGEGNFFIRPGGVFYVAGDKVGIVRLDAFKTSKEIQFAVQSGPMLMENGVINPRIHPNVASSKIRNGVGINKHGNAVFLLSQQATNFYDFACYAKAKLNVEQLLYLDGTISHMYMKGGAIPWQRYPFVTMISVERKG", - "protein_translation_length": 254, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3789" - ], - [ - "gene_synonym", - "corA" - ], - [ - "gene_synonym", - "EcoGene:EG11463" - ], - [ - "gene_synonym", - "GeneID:948351" - ], - [ - "gene_synonym", - "ECK3810" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABI4" - ], - [ - "gene_synonym", - "ASAP:ABE-0012464" - ], - [ - "gene_synonym", - "NP_418260.1" - ], - [ - "gene_synonym", - "GI:16131666" - ], - [ - "gene_synonym", - "b3816" - ] - ], - "dna_sequence": "ATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGAAAATATCTATAGCGACCTGGAGCAGTTGAGCCGGGTGATTATGGAAGGGCATCAGGGCGATGAGTACGACGAGGCGCTCTCCACTCTGGCGGAACTGGAAGATATCGGCTGGAAAGTTCGCCTGTGTCTGATGGATACCCAGCGCGCGCTCAACTTCCTGGTGCGTAAAGCGCGTTTACCGGGTGGGCAACTGGAGCAGGCGCGTGAAATCCTGCGAGATATCGAATCCCTGCTGCCGCATAACGAATCCCTGTTCCAGAAGGTGAACTTCCTGATGCAGGCGGCAATGGGTTTTATCAACATCGAGCAGAACCGCATCATCAAAATCTTCTCGGTGGTATCCGTGGTATTCCTGCCGCCGACGCTCGTTGCTTCCAGCTATGGCATGAACTTTGAGTTTATGCCAGAACTGAAGTGGAGCTTCGGCTACCCTGGCGCGATTATCTTTATGATCCTCGCGGGCCTGGCACCGTATCTGTACTTTAAGCGGAAGAACTGGTTGTAA", - "dna_sequence_length": 951, - "functions": 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"gene_synonym", - "ASAP:ABE-0012466" - ], - [ - "gene_synonym", - "GI:16131667" - ], - [ - "gene_synonym", - "b3817" - ] - ], - "dna_sequence": "ATGAGTAAGGAATATATGAACGATGGTTCATTAAGTGAAAAATGGAAATACCGATTTAATTTTTATGATCAACATGGTTTTCCTGGATTCTGGGGGGCAACACCAGAATATAAAGCAGCATTTAAAGCATTAAAAGTAAGACAACGCTTAACTATTCAAATGAATTTCATTGCTTTCTTCTGTTCCTGGATATATTTATTTGTCCTGGGGTTATGGAAAAAAGCAATTATAGTTCTATTACTTGGTATTCTATCTCTATTTGTTGGTGCACTAATTGGCGTTAACATTCTGGGAATTGCCGTAGCAGCCTATGTTGCTGTTAACACGAACAAATGGTTCTATGAGAAAGAGGTAAAAGGGTTAAATACCTGGAGCCTTTGA", - "dna_sequence_length": 381, - "functions": [ - "DUF2628 family putative inner membrane protein" - ], - "id": "CDS_3753", - "location": [ - [ - "NC_000913", - 4002799, - "-", - 381 - ] - ], - "md5": "902422327310f749f65ed2a11e56fe88", - "parent_gene": "", - "protein_md5": "00114b18d6a5d476c5945aa918bf782a", - "protein_translation": "MSKEYMNDGSLSEKWKYRFNFYDQHGFPGFWGATPEYKAAFKALKVRQRLTIQMNFIAFFCSWIYLFVLGLWKKAIIVLLLGILSLFVGALIGVNILGIAVAAYVAVNTNKWFYEKEVKGLNTWSL", - "protein_translation_length": 126, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yigG" - ], - [ - "gene_synonym", - "EcoGene:EG11465" - ], - [ - "gene_synonym", - "GI:90111651" - ], - [ - "gene_synonym", - "GeneID:948344" - ], - [ - "gene_synonym", - "NP_418262.2" - ], - [ - "gene_synonym", - "ECK3812" - ], - [ - "gene_synonym", - "b3818" - ], - [ - "gene_synonym", - "ASAP:ABE-0012468" - ], - [ - "gene_synonym", - "JW5590" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27843" - ] - ], - "dna_sequence": "ATGTTACGTATATTTATCCCAACATCTAACGGTAAGATTTCCAGACGTCGTTATATATTTTCATTTATTTTAATAAATTTCATTTTTGCCTTTCTTATTATCTTTTTTAACGATGGAGAAGCAGGCTTTCTTGTTATAGTCTCTACCATCGTACTCCATTATCTCGTCATCAACATGAATTGCCAGCGACTCCGTGATAGTGGTTTCATCTATATAAAAACTTATGTTTTTGGTACATTAGCAGTATATATCATCTCTATCATCACAATGATAGCCGAAGATTTTGCCTGTTCAGGCAATGGTTCGATGATTTTTTTGATTTGTTATTTTTCCACTTTCAGTATGCTAATGCTTGCACCTACTGATTCATCAAAACAATAG", - "dna_sequence_length": 381, - "functions": [ - "PRK11371 family inner membrane protein" - ], - "id": "CDS_3754", - "location": [ - [ - "NC_000913", - 4003193, - "-", - 381 - ] - ], - "md5": "6bb5a07cfb6063f71c4cda33d14f8ae3", - "parent_gene": "", - "protein_md5": "931244c0057aac1af18044ca5999bf3a", - "protein_translation": "MLRIFIPTSNGKISRRRYIFSFILINFIFAFLIIFFNDGEAGFLVIVSTIVLHYLVINMNCQRLRDSGFIYIKTYVFGTLAVYIISIITMIAEDFACSGNGSMIFLICYFSTFSMLMLAPTDSSKQ", - "protein_translation_length": 126, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5589" - ], - [ - "gene_synonym", - "EcoGene:EG11466" - ], - [ - "gene_synonym", - "YP_026262.1" - ], - [ - "gene_synonym", - "rarD" - ], - [ - "gene_synonym", - "yigH" - ], - [ - "gene_synonym", - "b3819" - ], - [ - "gene_synonym", - "ECK3813" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27844" - ], - [ - "gene_synonym", - "ASAP:ABE-0012472" - ], - [ - "gene_synonym", - "GI:49176418" - ], - [ - "gene_synonym", - "GeneID:948330" - ] - ], - "dna_sequence": "ATGGATGCAAAACAAACGCGGCAGGGCGTATTACTCGCTCTTGCCGCTTATTTTATTTGGGGTATAGCGCCAGCGTACTTCAAGTTGATTTACTACGTGCCCGCCGATGAAATCCTGACGCATCGCGTGATCTGGTCGTTTTTCTTTATGGTGGTGCTGATGAGCATTTGCCGCCAGTGGTCCTATTTAAAAACGCTGATTCAGACGCCACAGAAAATTTTTATGCTGGCAGTCTCTGCCGTGCTGATTGGTGGCAACTGGCTACTGTTTATCTGGGCGGTGAACAATCACCATATGCTGGAAGCGAGCCTTGGTTACTTTATTAACCCGCTGGTGAACATTGTGCTGGGGATGATTTTCCTCGGCGAGCGATTCCGCCGGATGCAATGGCTGGCGGTGATTCTGGCGATATGTGGCGTGTTAGTCCAGCTGTGGACTTTTGGTTCGCTACCTATTATCGCGCTGGGACTGGCATTTAGTTTTGCCTTCTACGGTCTGGTACGCAAGAAGATTGCCGTTGAAGCGCAAACCGGCATGTTAATCGAAACCATGTGGCTGCTGCCCGTGGCGGCAATTTACCTGTTTGCTATTGCCGACAGCTCAACCAGCCATATGGGGCAAAACCCGATGTCGCTGAATTTACTGCTGATCGCCGCCGGTATTGTCACTACCGTACCGCTGTTGTGTTTTACCGCCGCTGCCACGCGCTTGCGTCTCTCAACGTTAGGCTTTTTCCAGTACATTGGCCCGACGCTGATGTTCCTGCTGGCTGTGACGTTTTATGGTGAAAAACCGGGTGCCGATAAGATGGTGACTTTCGCCTTTATTTGGGTGGCGCTGGCAATTTTTGTGATGGATGCGATTTATACGCAGCGTAGAACGTCCAAATAA", - "dna_sequence_length": 891, - "functions": [ - "putative chloramphenical resistance permease" - ], - "id": "CDS_3755", - "location": [ - [ - "NC_000913", - 4004178, - "-", - 891 - ] - ], - "md5": "75df8b825fe94e7107cdc603064b4231", - "parent_gene": "", - "protein_md5": "96b08e8d879df54df1aad668aa3ccad0", - "protein_translation": "MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQRRTSK", - "protein_translation_length": 296, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3820" - ], - [ - "gene_synonym", - "GI:90111652" - ], - [ - "gene_synonym", - "EcoGene:EG11467" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADP2" - ], - [ - "gene_synonym", - "yigI" - ], - [ - "gene_synonym", - "JW5588" - ], - [ - "gene_synonym", - "GeneID:948338" - ], - [ - "gene_synonym", - "NP_418264.4" - ], - [ - "gene_synonym", - "ECK3814" - ], - [ - "gene_synonym", - "ASAP:ABE-0012474" - ] - ], - "dna_sequence": "ATGTCTGCCGTACTGACCGCTGAACAAGCCCTGAAATTAGTGGGTGAGATGTTTGTTTATCACATGCCATTTAACCGCGCATTGGGGATGGAACTGGAGCGTTACGAAAAAGAGTTCGCACAGCTGGCCTTTAAAAATCAGCCAATGATGGTGGGCAACTGGGCGCAAAGCATTTTGCACGGCGGGGTCATTGCGTCGGCGCTGGATGTCGCCGCCGGTCTGGTGTGCGTGGGAAGTACCTTAACCCGCCACGAAACCATCAGTGAAGATGAACTACGCCAGCGGCTATCGCGGATGGGGACCATTGATCTTCGCGTTGATTATCTGCGCCCAGGCAGGGGCGAGCGTTTTACTGCTACTAGTAGCCTGTTGCGTGCAGGCAATAAAGTCGCCGTCGCCCGCGTTGAATTACACAATGAAGAACAGCTTTATATTGCCAGTGCCACCGCCACCTATATGGTAGGTTGA", - "dna_sequence_length": 468, - "functions": [ - "4HBT thioesterase family protein" - ], - "id": "CDS_3756", - "location": [ - [ - "NC_000913", - 4004697, - "-", - 468 - ] - ], - "md5": "30226e71990e1c174ac068033588e991", - "parent_gene": "", - "protein_md5": "7dd21fe7171c9e259c7ece19b5ba22f4", - "protein_translation": "MSAVLTAEQALKLVGEMFVYHMPFNRALGMELERYEKEFAQLAFKNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTIDLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIASATATYMVG", - "protein_translation_length": 155, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3821" - ], - [ - "gene_synonym", - "EcoGene:EG10738" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A921" - ], - [ - "gene_synonym", - "JW3794" - ], - [ - "gene_synonym", - "GeneID:948307" - ], - [ - "gene_synonym", - "ASAP:ABE-0012479" - ], - [ - "gene_synonym", - "pldA" - ], - [ - "gene_synonym", - "ECK3815" - ], - [ - "gene_synonym", - "GI:16131671" - ], - [ - "gene_synonym", - "NP_418265.1" - ] - ], - "dna_sequence": "ATGCGGACTCTGCAGGGCTGGTTGTTGCCGGTGTTTATGTTGCCTATGGCAGTATATGCACAAGAGGCAACGGTGAAAGAGGTGCATGACGCGCCAGCGGTGCGTGGCAGTATTATCGCCAATATGCTGCAGGAGCATGACAATCCGTTCACGCTCTATCCTTATGACACCAACTACCTCATTTACACCCAAACCAGCGATCTGAATAAAGAAGCGATTGCCAGTTACGACTGGGCGGAAAATGCGCGTAAGGATGAAGTAAAGTTTCAGTTGAGCCTGGCATTTCCGCTGTGGCGTGGGATTTTAGGCCCGAACTCGGTGTTGGGTGCGTCTTATACGCAAAAATCCTGGTGGCAACTGTCCAATAGCGAAGAGTCTTCACCGTTTCGTGAAACCAACTACGAACCGCAATTGTTCCTCGGTTTTGCCACCGATTACCGTTTTGCAGGTTGGACGCTGCGCGATGTGGAGATGGGGTATAACCACGACTCTAACGGGCGTTCCGACCCGACCTCCCGCAGCTGGAACCGCCTTTATACTCGCCTGATGGCAGAAAACGGTAACTGGCTGGTAGAAGTGAAGCCGTGGTATGTGGTGGGTAATACTGACGATAACCCGGATATCACCAAATATATGGGTTACTACCAGCTTAAAATCGGCTATCACCTCGGTGATGCGGTGCTCAGTGCGAAAGGACAGTACAACTGGAACACCGGCTACGGCGGCGCGGAGTTAGGCTTAAGTTACCCGATCACCAAACATGTGCGCCTTTATACTCAGGTTTACAGCGGCTATGGCGAATCGCTCATCGACTATAACTTCAACCAGACCCGTGTCGGTGTGGGGGTTATGCTAAACGATTTGTTTTGA", - "dna_sequence_length": 870, - "functions": [ - "outer membrane phospholipase A" - ], - "id": "CDS_3757", - "location": [ - [ - "NC_000913", - 4004862, - "+", - 870 - ] - ], - "md5": "da350be5e61e35725cdd8022569f3927", - "parent_gene": "", - "protein_md5": "3fe41c180d748b8b1949d7213bbc728e", - "protein_translation": "MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF", - "protein_translation_length": 289, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:162135918" - ], - [ - "gene_synonym", - "YP_026263.3" - ], - [ - "gene_synonym", - "b3822" - ], - [ - "gene_synonym", - "ASAP:ABE-0012483" - ], - [ - "gene_synonym", - "ECK3816" - ], - [ - "gene_synonym", - "GeneID:948318" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15043" - ], - [ - "gene_synonym", - "JW5855" - ], - [ - "gene_synonym", - "recQ" - ], - [ - "gene_synonym", - "EcoGene:EG10833" - ] - ], - "dna_sequence": "GTGGCGCAGGCGGAAGTGTTGAATCTGGAGTCCGGAGCTAAACAGGTTTTACAAGAAACCTTTGGCTACCAACAGTTTCGCCCCGGCCAGGAAGAAATTATCGACACTGTGCTTTCCGGCCGCGATTGCCTCGTCGTCATGCCCACTGGTGGCGGAAAATCCCTTTGCTATCAAATCCCTGCCTTATTGCTAAACGGCCTTACCGTGGTTGTTTCACCGCTGATTTCGTTGATGAAAGATCAGGTGGATCAACTGCAAGCCAACGGCGTGGCGGCGGCGTGCCTTAACTCGACGCAAACCCGCGAACAGCAACTTGAAGTGATGACAGGCTGCCGCACCGGGCAAATTCGTCTGCTTTATATCGCCCCGGAACGCCTGATGCTGGATAACTTTCTTGAGCATCTGGCGCACTGGAATCCGGTGTTATTAGCCGTTGATGAAGCGCACTGTATCTCCCAATGGGGCCACGATTTCCGCCCGGAATATGCCGCGCTCGGTCAGTTGCGCCAGCGGTTCCCGACGCTGCCGTTTATGGCGCTGACCGCCACAGCCGACGACACCACGCGCCAGGATATCGTGCGCCTGCTGGGGCTGAACGATCCGCTGATTCAAATCAGCAGTTTTGACCGTCCGAATATTCGCTACATGCTGATGGAGAAGTTCAAACCGCTCGATCAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCTGGAAAATAATGTTCGCGCCGATGTGCAGGAAAAATTCCAGCGCGATGACCTGCAAATTGTGGTGGCGACGGTGGCGTTCGGCATGGGCATCAATAAACCAAACGTTCGCTTCGTGGTCCACTTTGATATTCCGCGCAATATCGAATCCTATTATCAGGAAACCGGACGCGCCGGGCGTGATGGCCTGCCCGCGGAAGCGATGCTGTTTTACGATCCGGCTGATATGGCGTGGCTGCGCCGTTGTCTGGAAGAGAAGCCGCAGGGGCAGTTGCAGGATATCGAGCGCCACAAACTCAATGCGATGGGCGCGTTTGCCGAAGCGCAAACTTGCCGTCGTCTGGTATTGCTGAACTATTTTGGCGAAGGGCGTCAGGAGCCGTGCGGGAACTGCGATATCTGCCTCGATCCGCCGAAACAGTACGACGGTTCAACCGATGCTCAGATTGCCCTTTCCACCATTGGTCGTGTGAATCAGCGGTTTGGGATGGGTTATGTGGTGGAAGTGATTCGTGGTGCTAATAACCAGCGTATCCGCGACTATGGTCATGACAAACTGAAAGTCTATGGCATGGGCCGTGATAAAAGCCATGAACATTGGGTGAGCGTGATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCGAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAACTATGATCGCAAACTGTTCGCCAAATTACGCAAACTGCGTAAATCGATAGCCGATGAAAGTAATGTCCCGCCGTACGTGGTGTTTAACGACGCAACCTTGATTGAGATGGCTGAACAGATGCCGATCACCGCCAGCGAAATGCTCAGCGTTAACGGCGTTGGGATGCGCAAGCTGGAACGCTTTGGCAAACCGTTTATGGCGCTGATTCGTGCGCATGTTGATGGCGATGACGAAGAGTAG", - "dna_sequence_length": 1830, - "functions": [ - "ATP-dependent DNA helicase" - ], - "id": "CDS_3758", - "location": [ - [ - "NC_000913", - 4005864, - "+", - 1830 - ] - ], - "md5": "04b5e8b822d0fd79eab8866d1307eb0f", - "parent_gene": "", - "protein_md5": "9c33608832ee7ff8036517b028057c44", - "protein_translation": "MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAHVDGDDEE", - "protein_translation_length": 609, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3823" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG38" - ], - [ - "gene_synonym", - "YP_026264.1" - ], - [ - "gene_synonym", - "yigJ" - ], - [ - "gene_synonym", - "rhtC" - ], - [ - "gene_synonym", - "ASAP:ABE-0012487" - ], - [ - "gene_synonym", - "ECK3817" - ], - [ - "gene_synonym", - "GeneID:948317" - ], - [ - "gene_synonym", - "EcoGene:EG11468" - ], - [ - "gene_synonym", - "GI:49176421" - ], - [ - "gene_synonym", - "JW5586" - ] - ], - "dna_sequence": "ATGTTGATGTTATTTCTCACCGTCGCCATGGTGCACATTGTGGCGCTTATGAGCCCCGGTCCCGATTTCTTTTTTGTCTCTCAGACCGCTGTCAGTCGTTCCCGTAAAGAAGCGATGATGGGCGTGCTGGGCATTACCTGCGGCGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATTATGGTGGGCGGTGGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTGGCGAAAAGTGGGCGCAGTTTCCTGAAAGGTTTACTGACCAATCTCGCTAATCCGAAAGCGATTATCTACTTTGGCTCGGTGTTCTCATTGTTTGTCGGTGATAACGTTGGCACTACCGCGCGCTGGGGCATTTTTGCGCTGATCATTGTCGAAACGCTGGCGTGGTTTACCGTCGTTGCCAGCCTGTTTGCCCTGCCGCAAATGCGCCGTGGTTATCAACGTCTGGCGAAGTGGATTGATGGTTTTGCCGGGGCGTTATTTGCCGGATTTGGCATTCATTTGATTATTTCGCGGTGA", - "dna_sequence_length": 621, - "functions": [ - "threonine efflux pump" - ], - "id": "CDS_3759", - "location": [ - [ - "NC_000913", - 4007757, - "+", - 621 - ] - ], - "md5": "35d139b6192a32f384ce2f6b7f2e4e05", - "parent_gene": "", - "protein_md5": "f2045c7b67be2aa5ba327a83262764c1", - "protein_translation": "MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLGITCGVMVWAGIALLGLHLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVETLAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR", - "protein_translation_length": 206, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3824" - ], - [ - "gene_synonym", - "rhtB" - ], - [ - "gene_synonym", - "yigK" - ], - [ - "gene_synonym", - "ASAP:ABE-0012490" - ], - [ - "gene_synonym", - "GeneID:948316" - ], - [ - "gene_synonym", - "YP_026265.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG34" - ], - [ - "gene_synonym", - "ECK3818" - ], - [ - "gene_synonym", - "EcoGene:EG11469" - ], - [ - "gene_synonym", - "JW5585" - ], - [ - "gene_synonym", - "GI:49176422" - ] - ], - "dna_sequence": "ATGACCTTAGAATGGTGGTTTGCCTACCTGCTGACATCGATCATTTTAAGCCTGTCGCCAGGCTCTGGTGCAATCAACACTATGACCACCTCGCTCAACCACGGTTATCGCGGCGCGGTGGCGTCTATTGCTGGGCTTCAGACCGGACTGGCGATTCATATTGTGCTGGTTGGCGTGGGGTTGGGGACGCTATTTTCCCGCTCAGTGATTGCGTTTGAAGTGTTGAAGTGGGCAGGCGCGGCTTACTTGATTTGGCTGGGAATCCAGCAGTGGCGCGCCGCTGGTGCAATTGACCTTAAATCGCTGGCCTCTACTCAATCGCGTCGACATTTGTTCCAGCGCGCAGTTTTTGTGAATCTCACCAATCCCAAAAGTATTGTGTTTCTGGCGGCGCTATTTCCGCAATTCATCATGCCGCAACAGCCGCAACTGATGCAGTATATCGTGCTCGGCGTCACCACTATTGTGGTCGATATTATTGTGATGATCGGTTACGCCACCCTTGCTCAACGGATTGCTCTATGGATTAAAGGACCAAAGCAGATGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCGAGGCATGCGTGA", - "dna_sequence_length": 621, - "functions": [ - "homoserine, homoserine lactone and S-methyl-methionine efflux pump" - ], - "id": "CDS_3760", - "location": [ - [ - "NC_000913", - 4009059, - "-", - 621 - ] - ], - "md5": "33deb2087c7b78aadddfd89603d984fd", - "parent_gene": "", - "protein_md5": "38795d3facf63047ab028f62d0851ef1", - "protein_translation": "MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIAGLQTGLAIHIVLVGVGLGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSLASTQSRRHLFQRAVFVNLTNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDIIVMIGYATLAQRIALWIKGPKQMKALNKIFGSLFMLVGALLASARHA", - "protein_translation_length": 206, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3825" - ], - [ - "gene_synonym", - "EcoGene:EG10739" - ], - [ - "gene_synonym", - "ASAP:ABE-0012494" - ], - [ - "gene_synonym", - "pldB" - ], - [ - "gene_synonym", - "YP_026266.1" - ], - [ - "gene_synonym", - "GeneID:948314" - ], - [ - "gene_synonym", - "ECK3819" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07000" - ], - [ - "gene_synonym", - "JW5584" - ], - [ - "gene_synonym", - "GI:49176423" - ] - ], - "dna_sequence": "ATGTTTCAGCAGCAAAAAGACTGGGAAACAAGAGAAAACGCGTTTGCTGCTTTTACCATGGGACCGCTGACTGATTTCTGGCGTCAGCGTGATGAAGCAGAGTTTACTGGTGTGGATGACATTCCGGTGCGCTTTGTCCGTTTTCGCGCACAGCACCATGACCGGGTGGTAGTCATCTGCCCGGGGCGTATTGAGAGCTACGTAAAATATGCGGAACTGGCCTATGACCTGTTCCATTTGGGGTTTGATGTCTTAATCATCGACCATCGCGGGCAGGGACGTTCCGGTCGCCTGTTAGCCGATCCGCATCTCGGGCATGTTAATCGCTTTAATGATTATGTTGATGATCTGGCGGCATTCTGGCAGCAGGAGGTTCAGCCCGGTCCGTGGCGTAAACGCTATATACTGGCACATTCGATGGGCGGTGCGATCTCCACATTATTTCTGCAACGCCATCCAGGTGTATGTGACGCCATTGCGCTAACTGCGCCAATGTTTGGGATCGTGATTCGTATGCCGTCATTTATGGCACGGCAGATCCTCAACTGGGCCGAAGCGCATCCACGTTTCCGTGATGGCTATGCAATAGGCACCGGGCGCTGGCGCGCGTTGCCGTTTGCTATCAACGTACTGACCCACAGCAGACAGCGATATCGACGTAACTTACGCTTCTATGCTGATGACCCAACGATTCGCGTCGGTGGGCCGACCTACCATTGGGTACGCGAAAGTATTCTGGCTGGCGAACAGGTGTTAGCCGGTGCGGGTGATGACGCCACGCCAACGCTTCTCTTGCAGGCTGAAGAGGAACGCGTGGTGGATAACCGCATGCATGACCGTTTTTGTGAACTCCGCACCGCCGCGGGCCATCCTGTCGAAGGAGGACGGCCGTTGGTAATTAAAGGTGCTTACCATGAGATCCTTTTTGAAAAGGACGCAATGCGCTCAGTCGCGCTCCACGCCATCGTTGATTTTTTCAACAGGCATAACTCACCCAGCGGAAACCGCTCTACAGAGGTTTAA", - "dna_sequence_length": 1023, - "functions": [ - "lysophospholipase L2" - ], - "id": "CDS_3761", - "location": [ - [ - "NC_000913", - 4009170, - "+", - 1023 - ] - ], - "md5": "e8be626f89824159fd8431d020aa7441", - "parent_gene": "", - "protein_md5": "2ef8dae2082ae3650d2ffd19c7a7060f", - "protein_translation": "MFQQQKDWETRENAFAAFTMGPLTDFWRQRDEAEFTGVDDIPVRFVRFRAQHHDRVVVICPGRIESYVKYAELAYDLFHLGFDVLIIDHRGQGRSGRLLADPHLGHVNRFNDYVDDLAAFWQQEVQPGPWRKRYILAHSMGGAISTLFLQRHPGVCDAIALTAPMFGIVIRMPSFMARQILNWAEAHPRFRDGYAIGTGRWRALPFAINVLTHSRQRYRRNLRFYADDPTIRVGGPTYHWVRESILAGEQVLAGAGDDATPTLLLQAEEERVVDNRMHDRFCELRTAAGHPVEGGRPLVIKGAYHEILFEKDAMRSVALHAIVDFFNRHNSPSGNRSTEV", - "protein_translation_length": 340, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0012500" - ], - [ - "gene_synonym", - "ECK3820" - ], - [ - "gene_synonym", - "YP_026267.1" - ], - [ - "gene_synonym", - "b3826" - ], - [ - "gene_synonym", - "yigL" - ], - [ - "gene_synonym", - "EcoGene:EG11470" - ], - [ - "gene_synonym", - "GeneID:2847768" - ], - [ - "gene_synonym", - "GI:49176424" - ], - [ - "gene_synonym", - "JW5854" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27848" - ] - ], - "dna_sequence": "ATGTACCAGGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCAATGGTGCGCGCGTTCACGATCTGGATGGTAATCTGATTTTTGCTCATAACCTGGATCGCGACATTGCCAGCGATCTGTTTGGCGTAGTCAACGACAATCCGGACATCATTACTAACGTTTATCGCGACGACGAATGGTTTATGAATCGCCATCGCCCGGAAGAGATGCGCTTTTTTAAAGAAGCGGTGTTCCAATATGCGCTGTATGAGCCTGGATTACTGGAGCCGGAAGGCGTCAGCAAAGTGTTCTTCACCTGCGATTCCCATGAACAACTGCTGCCGCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAA", - "dna_sequence_length": 801, - "functions": [ - "pyridoxal phosphate phosphatase" - ], - "id": "CDS_3762", - "location": [ - [ - "NC_000913", - 4010200, - "+", - 801 - ] - ], - "md5": "dc89a75d9c269c970cd46d6e7c761879", - "parent_gene": "", - "protein_md5": "cfd47bf4d83dd1e7f47a19090b82f4dc", - "protein_translation": "MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFQYALYEPGLLEPEGVSKVFFTCDSHEQLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGSAHQRLKDLHPELEVIGTNADDAVPHYLRKLYLS", - "protein_translation_length": 266, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11471" - ], - [ - "gene_synonym", - "JW3803" - ], - [ - "gene_synonym", - "ASAP:ABE-0012504" - ], - [ - "gene_synonym", - "b3827" - ], - [ - "gene_synonym", - "yigM" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADP5" - ], - [ - "gene_synonym", - "NP_418271.1" - ], - [ - "gene_synonym", - "GeneID:948309" - ], - [ - "gene_synonym", - "ECK3821" - ], - [ - "gene_synonym", - "GI:16131676" - ] - ], - "dna_sequence": "GTGGCGCTACTTATCATCACCACGATTCTGTGGGCCTTCTCCTTTAGCTTTTATGGCGAGTACCTTGCGGGGCACGTCGATAGCTATTTTGCGGTGCTGGTGCGCGTTGGCCTGGCGGCACTCGTTTTTCTGCCGTTTCTGCGTACCCGTGGCAATAGCCTGAAAACGGTCGGCCTGTATATGCTGGTGGGCGCGATGCAGCTTGGCGTGATGTATATGCTGAGTTTCCGCGCTTATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCCGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGGACTGGCTTGCTGCTGGTGCAACTCTCCAATATCACTTTTGCCATTGGCATGGTGGGTTACAAACGCCTGATGGAAACTCGCCCGATGCCACAGCATAACGCCTTTGCGTGGTTCTATCTTGGCGCGTTTCTGGTGGCAGTGATTGCATGGTTCTTGCTGGGAAATGCGCAGAAAATGCCGCAAACCACGCTGCAATGGGGCATTCTGGTGTTTCTTGGCGTGGTGGCTTCCGGGATTGGCTACTTTATGTGGAACTACGGCGCGACGCAGGTGGACGCCGGAACGCTGGGCATTATGAATAATATGCACGTTCCGGCAGGGCTGCTGGTAAACCTGGCTATCTGGCACCAACAGCCGCACTGGCCAACGTTTATTACAGGCGCGCTGGTGATCCTGGCCTCACTGTGGGTGCATCGTAAGTGGGTCGCTCCGCGCTCTTCACAAACGGCAGATGATCGCAGGCGTGATTGCGCGCTGAGCGAATAA", - "dna_sequence_length": 900, - "functions": [ - "putative inner membrane EamA-like transporter" - ], - "id": "CDS_3763", - "location": [ - [ - "NC_000913", - 4011076, - "+", - 900 - ] - ], - "md5": "280c87bb9f5df2defe7e83911e22a9e6", - "parent_gene": "", - "protein_md5": "a1cf06d9ecab992806eb71f4d1c62d2d", - "protein_translation": "MALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFLPFLRTRGNSLKTVGLYMLVGAMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIYDIMSKRRLRWGYAFSALLAVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKRLMETRPMPQHNAFAWFYLGAFLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIGYFMWNYGATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPTFITGALVILASLWVHRKWVAPRSSQTADDRRRDCALSE", - "protein_translation_length": 299, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "metR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9F9" - ], - [ - "gene_synonym", - "JW3804" - ], - [ - "gene_synonym", - "ASAP:ABE-0012506" - ], - [ - "gene_synonym", - "b3828" - ], - [ - "gene_synonym", - "ECK3822" - ], - [ - "gene_synonym", - "GeneID:948310" - ], - [ - "gene_synonym", - "NP_418272.1" - ], - [ - "gene_synonym", - "EcoGene:EG10591" - ], - [ - "gene_synonym", - "GI:16131677" - ] - ], - "dna_sequence": "ATGATCGAAGTAAAACACCTGAAAACGCTACAAGCGTTGCGGAACTGCGGCTCGCTCGCAGCCGCTGCGGCGACGTTGCATCAGACGCAATCCGCCCTGTCTCACCAGTTTAGCGATCTGGAACAACGCCTTGGCTTCCGGCTATTTGTGCGTAAGAGCCAGCCGCTACGCTTTACACCGCAGGGAGAAATCCTGTTGCAACTGGCAAACCAGGTACTGCCGCAAATTAGCCAGGCCCTGCAAGCCTGCAATGAACCGCAGCAGACGCGTCTGCGCATTGCCATTGAGTGCCATAGCTGTATTCAGTGGCTGACACCCGCGTTAGAAAATTTCCATAAGAACTGGCCGCAGGTAGAGATGGATTTTAAATCGGGCGTGACATTTGACCCGCAGCCCGCCTTGCAACAGGGAGAGCTGGATCTGGTAATGACGTCCGATATTCTGCCGCGCAGTGGCCTGCATTATTCGCCGATGTTCGACTATGAAGTGCGTCTGGTGTTAGCACCTGACCATCCACTGGCGGCGAAAACGCGAATTACACCGGAAGATCTCGCCAGCGAGACGCTATTAATTTATCCGGTGCAGCGTAGTCGACTGGATGTCTGGCGGCATTTTCTTCAGCCGGCAGGCGTCAGCCCGTCACTGAAAAGCGTCGATAACACCTTATTGTTGATTCAGATGGTTGCCGCGCGGATGGGTATTGCCGCGCTACCGCATTGGGTAGTAGAGAGTTTTGAGCGCCAGGGTCTGGTGGTGACCAAAACCCTGGGCGAAGGCTTGTGGAGCCGACTGTACGCCGCCGTGCGCGATGGCGAGCAGCGTCAGCCAGTTACGGAAGCGTTTATTCGCTCAGCGCGCAATCACGCCTGCGATCATCTGCCGTTTGTGAAGAGCGCGGAGCGACCCACTTACGATGCACCCACAGTGAGGCCAGGATCACCAGCGCGCCTGTAA", - "dna_sequence_length": 954, - "functions": [ - "methionine biosynthesis regulon transcriptional regulator" - ], - "id": "CDS_3764", - "location": [ - [ - "NC_000913", - 4012816, - "-", - 954 - ] - ], - "md5": "ff4e7d25257a7363da01dd018013a224", - "parent_gene": "", - "protein_md5": "67d8c6fb034ee63a05d25161df201b8a", - "protein_translation": "MIEVKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRLGFRLFVRKSQPLRFTPQGEILLQLANQVLPQISQALQACNEPQQTRLRIAIECHSCIQWLTPALENFHKNWPQVEMDFKSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFDYEVRLVLAPDHPLAAKTRITPEDLASETLLIYPVQRSRLDVWRHFLQPAGVSPSLKSVDNTLLLIQMVAARMGIAALPHWVVESFERQGLVVTKTLGEGLWSRLYAAVRDGEQRQPVTEAFIRSARNHACDHLPFVKSAERPTYDAPTVRPGSPARL", - "protein_translation_length": 317, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3805" - ], - [ - "gene_synonym", - "ECK3823" - ], - [ - "gene_synonym", - "b3829" - ], - [ - "gene_synonym", - "GI:16131678" - ], - [ - "gene_synonym", - "metB12" - ], - [ - "gene_synonym", - "metE" - ], - [ - "gene_synonym", - "ASAP:ABE-0012520" - ], - [ - "gene_synonym", - "EcoGene:EG10584" - ], - [ - "gene_synonym", - "GeneID:948323" - ], - [ - "gene_synonym", - "NP_418273.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25665" - ] - ], - "dna_sequence": "ATGACAATATTGAATCACACCCTCGGTTTCCCTCGCGTTGGCCTGCGTCGCGAGCTGAAAAAAGCGCAAGAAAGTTATTGGGCGGGGAACTCCACGCGTGAAGAACTGCTGGCGGTAGGGCGTGAATTGCGTGCTCGTCACTGGGATCAACAAAAGCAAGCGGGTATCGACCTGCTGCCGGTGGGCGATTTTGCCTGGTACGATCATGTACTGACCACCAGTCTGCTGCTGGGTAACGTTCCGGCGCGTCATCAGAACAAAGATGGTTCGGTAGATATCGACACCCTGTTCCGTATTGGTCGTGGACGTGCGCCGACTGGCGAACCTGCGGCGGCAGCGGAAATGACCAAATGGTTTAACACCAACTATCACTACATGGTGCCGGAGTTCGTTAAAGGCCAACAGTTCAAACTGACCTGGACGCAGCTGCTGGACGAAGTGGACGAGGCGCTGGCGCTGGGCCACAAGGTGAAACCTGTGCTGCTGGGGCCGGTTACCTGGCTGTGGCTGGGGAAAGTGAAAGGTGAACAATTTGACCGCCTGAGCCTGCTGAACGACATTCTGCCGGTTTATCAGCAAGTGCTGGCAGAACTGGCGAAACGCGGCATCGAGTGGGTACAGATTGATGAACCCGCGCTGGTACTGGAACTACCACAGGCGTGGCTGGACGCATACAAACCCGCTTACGACGCGCTCCAGGGACAGGTGAAACTGCTGCTGACCACCTATTTTGAAGGCGTAACGCCAAATCTCGACACGATTACTGCGCTGCCTGTTCAGGGTCTGCATGTTGACCTCGTACATGGTAAAGATGACGTTGCTGAACTGCACAAGCGCCTGCCTTCTGACTGGTTGCTGTCTGCGGGTCTGATCAATGGTCGTAACGTCTGGCGCGCCGATCTTACCGAGAAATATGCGCAAATTAAGGACATTGTCGGCAAACGTGATTTGTGGGTGGCATCTTCCTGCTCGTTGCTGCACAGCCCCATCGACCTGAGCGTGGAAACGCGTCTTGATGCAGAAGTGAAAAGCTGGTTTGCCTTCGCCCTACAAAAATGCCATGAACTGGCACTGCTGCGCGATGCGCTGAACAGTGGTGACACGGCAGCTCTGGCAGAGTGGAGCGCCCCGATTCAGGCACGTCGTCACTCTACCCGCGTACATAATCCGGCGGTAGAAAAGCGTCTGGCGGCGATCACCGCCCAGGACAGCCAGCGTGCGAATGTCTATGAAGTGCGTGCTGAAGCCCAGCGTGCGCGTTTTAAACTGCCAGCGTGGCCGACCACCACGATTGGTTCCTTCCCGCAAACCACGGAAATTCGTACCCTGCGTCTGGATTTCAAAAAGGGCAATCTCGACGCCAACAACTACCGCACGGGCATTGCGGAACATATCAAGCAGGCCATTGTTGAGCAGGAACGTTTGGGACTGGATGTGCTGGTACATGGCGAGGCCGAGCGTAATGACATGGTGGAATACTTTGGCGAGCACCTCGACGGATTTGTCTTTACGCAAAACGGTTGGGTACAGAGCTACGGTTCCCGCTGCGTGAAGCCACCGATTGTCATTGGTGACATTAGCCGCCCGGCACCGATTACCGTGGAGTGGGCGAAGTATGCGCAATCGCTGACCGACAAACCGGTGAAAGGGATGCTGACGGGGCCGGTGACCATACTCTGCTGGTCGTTCCCGCGTGAAGATGTCAGCCGTGAAACCATCGCCAAACAGATTGCGCTGGCGCTGCGTGATGAAGTGGCCGATCTGGAAGCCGCTGGAATTGGCATCATCCAGATTGACGAACCGGCGCTGCGCGAAGGTTTACCGCTGCGTCGTAGCGACTGGGATGCGTATCTCCAGTGGGGCGTAGAGGCCTTCCGTATCAACGCCGCCGTGGCGAAAGATGACACACAAATCCACACTCACATGTGTTATTGCGAGTTCAACGACATCATGGATTCGATTGCGGCGCTGGACGCAGACGTCATCACCATCGAAACCTCGCGTTCCGACATGGAGTTGCTGGAGTCGTTTGAAGAGTTTGATTATCCAAATGAAATCGGTCCTGGCGTCTATGACATTCACTCGCCAAACGTACCGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAA", 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"MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRAPTGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLDEVDEALALGHKVKPVLLGPVTWLWLGKVKGEQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAYDALQGQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVAELHKRLPSDWLLSAGLINGRNVWRADLTEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSVETRLDAEVKSWFAFALQKCHELALLRDALNSGDTAALAEWSAPIQARRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLRRG", - "protein_translation_length": 753, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3830" - ], - [ - "gene_synonym", - "ysgA" - ], - [ - "gene_synonym", - "YP_026268.1" - ], - [ - "gene_synonym", - "ECK3824" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P56262" - ], - [ - "gene_synonym", - "GeneID:948320" - ], - [ - "gene_synonym", - "EcoGene:EG14321" - ], - [ - "gene_synonym", - "GI:49176425" - ], - [ - "gene_synonym", - "JW5853" - ], - [ - "gene_synonym", - "ASAP:ABE-0012522" - ] - ], - "dna_sequence": "ATGGCAACAACACAACAATCTGGATTTGCACCTGCTGCATCGCCTCTCGCTTCGACCATCGTTCAGACCCCGGACGACGCGATTGTGGCGGGCTTCACCTCTATCCCTTCACAAGGGGATAACATGCCTGCTTACCATGCCAGACCAAAGCAAAGCGATGGCCCACTGCCAGTGGTCATTGTAGTGCAGGAAATTTTTGGCGTGCATGAACATATCCGCGACATTTGTCGCCGTCTGGCGCTGGAGGGGTATCTGGCTATCGCACCTGAACTTTACTTCCGCGAAGGCGATCCGAATGATTTTGCCGATATCCCCACGTTGCTTAGCGGTCTGGTAGCAAAAGTGCCTGACTCGCAGGTGCTGGCCGATCTCGATCATGTCGCCAGTTGGGCTTCCCGCAACGGCGGCGATGTTCATCGTTTAATGATCACCGGATTCTGCTGGGGTGGACGTATCACCTGGCTGTATGCCGCGCATAATCCACAGCTAAAAGCCGCAGTGGCGTGGTACGGCAAACTGACGGGCGACAAGTCGCTGAATTCACCGAAACAACCTGTTGATATCGCAACCGATCTTAACGCGCCGATTCTCGGCTTATATGGTGGTCAGGATAACAGCATTCCGCAGGAGAGCGTTGAAACCATGCGCCAGGCGCTGCGGGCTGCTAATGCGAAAGCAGAGATTATCGTGTACCCGGACGCCGGGCATGCATTCAACGCTGATTATCGCCCGAGCTATCATGCCGCATCTGCAGAAGATGGCTGGCAGCGTATGCTGGAATGGTTTAAGCAGTATGGTGGGAAGAAGTCGCTGTAA", - "dna_sequence_length": 816, - "functions": [ - "putative carboxymethylenebutenolidase" - ], - "id": "CDS_3766", - "location": [ - [ - "NC_000913", - 4016169, - "-", - 816 - ] - ], - "md5": "b32b20875968cad010e5288c43c61e5b", - "parent_gene": "", - "protein_md5": "a7f8251c9e08cd2a2cd8cfd2e14c8b24", - "protein_translation": "MATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQGDNMPAYHARPKQSDGPLPVVIVVQEIFGVHEHIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAPILGLYGGQDNSIPQESVETMRQALRAANAKAEIIVYPDAGHAFNADYRPSYHAASAEDGWQRMLEWFKQYGGKKSL", - "protein_translation_length": 271, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "udp" - ], - [ - "gene_synonym", - "b3831" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P12758" - ], - [ - "gene_synonym", - "NP_418275.1" - ], - [ - "gene_synonym", - "ECK3825" - ], - [ - "gene_synonym", - "GI:16131680" - ], - [ - "gene_synonym", - "GeneID:948987" - ], - [ - "gene_synonym", - "ASAP:ABE-0012528" - ], - [ - "gene_synonym", - "JW3808" - ], - [ - "gene_synonym", - "EcoGene:EG11045" - ] - ], - "dna_sequence": "ATGTCCAAGTCTGATGTTTTTCATCTCGGCCTCACTAAAAACGATTTACAAGGGGCTACGCTTGCCATCGTCCCTGGCGACCCGGATCGTGTGGAAAAGATCGCCGCGCTGATGGATAAGCCGGTTAAGCTGGCATCTCACCGCGAATTCACTACCTGGCGTGCAGAGCTGGATGGTAAACCTGTTATCGTCTGCTCTACCGGTATCGGCGGCCCGTCTACCTCTATTGCTGTTGAAGAGCTGGCACAGCTGGGCATTCGCACCTTCCTGCGTATCGGTACAACGGGCGCTATTCAGCCGCATATTAATGTGGGTGATGTCCTGGTTACCACGGCGTCTGTCCGTCTGGATGGCGCGAGCCTGCACTTCGCACCGCTGGAATTCCCGGCTGTCGCTGATTTCGAATGTACGACTGCGCTGGTTGAAGCTGCGAAATCCATTGGCGCGACAACTCACGTTGGCGTGACAGCTTCTTCTGATACCTTCTACCCAGGTCAGGAACGTTACGATACTTACTCTGGTCGCGTAGTTCGTCACTTTAAAGGTTCTATGGAAGAGTGGCAGGCGATGGGCGTAATGAACTATGAAATGGAATCTGCAACCCTGCTGACCATGTGTGCAAGTCAGGGCCTGCGTGCCGGTATGGTAGCGGGTGTTATCGTTAACCGCACCCAGCAAGAGATCCCGAATGCTGAGACGATGAAACAAACCGAAAGCCATGCGGTGAAAATCGTGGTGGAAGCGGCGCGTCGTCTGCTGTAA", - "dna_sequence_length": 762, - "functions": [ - "uridine phosphorylase" - ], - "id": "CDS_3767", - "location": [ - [ - "NC_000913", - 4016431, - "+", - 762 - ] - ], - "md5": "5e442272df704d6c108067b5aabcd703", - "parent_gene": "", - "protein_md5": "ab622b9a421a3a5925feff745ba0d578", - "protein_translation": "MSKSDVFHLGLTKNDLQGATLAIVPGDPDRVEKIAALMDKPVKLASHREFTTWRAELDGKPVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHINVGDVLVTTASVRLDGASLHFAPLEFPAVADFECTTALVEAAKSIGATTHVGVTASSDTFYPGQERYDTYSGRVVRHFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAGVIVNRTQQEIPNAETMKQTESHAVKIVVEAARRLL", - "protein_translation_length": 253, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11472" - ], - [ - "gene_synonym", - "b3832" - ], - [ - "gene_synonym", - "yigN" - ], - [ - "gene_synonym", - "rmuC" - ], - [ - "gene_synonym", - "dinK" - ], - [ - "gene_synonym", - "ECK3826" - ], - [ - "gene_synonym", - "JW3809" - ], - [ - "gene_synonym", - "GI:16131681" - ], - [ - "gene_synonym", - "sosB" - ], - [ - "gene_synonym", - "GeneID:948966" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG71" - ], - [ - "gene_synonym", - "NP_418276.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012531" - ] - ], - "dna_sequence": "GTGGATTTCTCAATCATGGTTTACGCAGTTATTGCGTTGGTGGGTGTGGCAATTGGCTGGCTGTTTGCCAGTTATCAACATGCGCAGCAAAAAGCCGAGCAATTAGCTGAACGTGAAGAGATGGTCGCGGAGTTAAGCGCGGCAAAACAACAAATTACCCAAAGCGAGCACTGGCGTGCAGAGTGCGAGTTACTCAATAACGAAGTGCGCAGCCTGCAAAGTATTAACACCTCTCTGGAGGCCGATCTGCGTGAAGTAACCACGCGGATGGAAGCCGCACAGCAACATGCTGACGATAAAATTCGCCAGATGATTAACAGCGAGCAGCGCCTCAGTGAGCAGTTTGAAAACCTCGCCAACCGTATTTTTGAGCACAGCAATCGCCGGGTTGATGAGCAAAACCGTCAGAGTCTGAACAGCCTGTTGTCGCCGCTACGTGAACAACTGGACGGTTTCCGCCGTCAGGTTCAGGACAGCTTCGGTAAAGAAGCACAAGAACGCCATACCCTGACCCACGAAATTCGCAATCTCCAGCAACTCAACGCGCAAATGGCCCAGGAAGCGATCAACCTGACGCGCGCGCTGAAAGGCGACAATAAAACCCAGGGCAACTGGGGCGAGGTAGTATTGACGCGGGTGCTGGAGGCTTCCGGTCTGCGTGAAGGGTATGAATATGAAACCCAGGTCAGCATCGAAAATGACGCCCGCTCGCGGATGCAGCCGGATGTCATCGTGCGCCTGCCGCAGGGAAAAGATGTGGTGATCGACGCCAAAATGACGCTGGTCGCCTATGAACGCTATTTTAACGCCGAAGACGACTACACCCGCGAAAGCGCGCTACAGGAACATATCGCGTCGGTGCGTAACCATATCCGTTTGCTGGGACGCAAAGATTATCAACAGCTGCCGGGGCTGCGAACTCTGGATTACGTGCTGATGTTTATTCCCGTTGAACCCGCTTTTTTACTGGCGCTTGACCGCCAGCCGGAGCTGATCACCGAAGCGTTGAAAAACAACATCATGCTGGTTAGCCCGACTACGCTGCTGGTGGCGCTGCGCACTATCGCCAACCTGTGGCGTTATGAGCATCAAAGCCGCAACGCCCAGCAAATCGCCGATCGTGCCAGCAAGCTGTACGACAAGATGCGTTTGTTCATCGATGACATGTCCGCGATTGGTCAAAGTCTCGACAAAGCGCAGGATAATTATCGGCAGGCAATGAAAAAACTCTCTTCAGGGCGCGGAAATGTGCTGGCGCAGGCAGAAGCGTTTCGCGGTTTAGGAGTAGAAATTAAACGCGAGATTAATCCGGATTTGGCTGAACAGGCGGTGAGCCAGGATGAAGAGTATCGACTTCGGTCGGTTCCGGAGCAGCCGAATGATGAAGCTTATCAACGCGATGATGAATATAATCAGCAGTCGCGCTAG", - "dna_sequence_length": 1428, - "functions": [ - "DNA recombination protein" - ], - "id": "CDS_3768", - "location": [ - [ - "NC_000913", - 4017333, - "+", - 1428 - ] - ], - "md5": "f6a469ce4a2601bb29c1f135ea817718", - "parent_gene": "", - "protein_md5": "749a2ab6bf6ff9e4c701f8a100280e92", - "protein_translation": "MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR", - "protein_translation_length": 475, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11473" - ], - [ - "gene_synonym", - "ubiE" - ], - [ - "gene_synonym", - "b3833" - ], - [ - "gene_synonym", - "yigO" - ], - [ - "gene_synonym", - "YP_026269.1" - ], - [ - "gene_synonym", - "ECK3827" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A887" - ], - [ - "gene_synonym", - "GeneID:948926" - ], - [ - "gene_synonym", - "menH" - ], - [ - "gene_synonym", - "ASAP:ABE-0012534" - ], - [ - "gene_synonym", - "JW5581" - ], - [ - "gene_synonym", - "GI:49176426" - ], - [ - "gene_synonym", - "menG" - ] - ], - "dna_sequence": "ATGGTGGATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAATGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGGTCGGAGAAACTGGCAAAGTGGTCCTTGCTGATATCAATGAATCCATGCTCAAAATGGGCCGCGAGAAGCTGCGTAATATCGGTGTGATTGGCAACGTTGAGTATGTTCAGGCGAACGCTGAGGCGCTGCCGTTCCCGGATAACACCTTTGATTGCATCACCATTTCGTTTGGTCTGCGTAACGTCACCGACAAAGATAAAGCACTGCGTTCAATGTATCGCGTGCTGAAACCCGGCGGCCGCCTGCTGGTGCTTGAGTTCTCGAAGCCAATTATCGAGCCGCTGAGCAAAGCCTATGATGCATACTCCTTCCATGTGCTGCCGCGTATTGGCTCACTGGTCGCGAACGACGCCGACAGCTACCGTTATCTGGCAGAATCCATCCGTATGCATCCCGATCAGGATACCCTGAAAGCCATGATGCAGGATGCCGGATTCGAAAGTGTCGACTACTACAATCTGACGGCAGGGGTTGTGGCGCTGCATCGTGGTTATAAGTTCTGA", - "dna_sequence_length": 756, - "functions": [ - "bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase/ S-adenosylmethionine:2-DMK methyltransferase" - ], - "id": "CDS_3769", - "location": [ - [ - "NC_000913", - 4018855, - "+", - 756 - ] - ], - "md5": "a34533f2d661ffec6b1a9df678f949be", - "parent_gene": "", - "protein_md5": "2689b905d6a0de9bb235c08cee857bf8", - "protein_translation": "MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMSFGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLKMGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVLKPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQDTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF", - "protein_translation_length": 251, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3834" - ], - [ - "gene_synonym", - "JW3811" - ], - [ - "gene_synonym", - "EcoGene:EG11474" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADP7" - ], - [ - "gene_synonym", - "GeneID:948915" - ], - [ - "gene_synonym", - "ECK3828" - ], - [ - "gene_synonym", - "GI:16131683" - ], - [ - "gene_synonym", - "NP_418278.1" - ], - [ - "gene_synonym", - "ubiJ" - ], - [ - "gene_synonym", - "yigP" - ], - [ - "gene_synonym", - "ASAP:ABE-0012536" - ] - ], - "dna_sequence": "ATGCCTTTTAAACCTTTAGTGACGGCAGGAATTGAAAGTCTGCTCAACACCTTCCTGTATCGCTCACCCGCGCTGAAAACGGCCCGCTCGCGTCTGCTGGGTAAAGTATTGCGCGTGGAGGTAAAAGGCTTTTCGACGTCATTGATTCTGGTGTTCAGCGAACGCCAGGTTGATGTACTGGGCGAATGGGCAGGCGATGCTGACTGCACCGTTATCGCCTACGCCAGTGTGTTGCCGAAACTTCGCGATCGCCAGCAGCTTACCGCACTGATTCGCAGTGGTGAGCTGGAAGTGCAGGGCGATATTCAGGTGGTGCAAAACTTCGTTGCGCTGGCAGATCTGGCAGAGTTCGACCCTGCGGAACTGCTGGCCCCTTATACCGGTGATATCGCCGCTGAAGGAATCAGCAAAGCCATGCGCGGAGGCGCAAAGTTCCTGCATCACGGCATTAAGCGCCAGCAACGTTATGTGGCGGAAGCCATTACTGAAGAGTGGCGTATGGCACCCGGTCCGCTTGAAGTGGCCTGGTTTGCGGAAGAGACGGCTGCCGTCGAGCGTGCTGTTGATGCCCTGACCAAACGGCTGGAAAAACTGGAGGCTAAATGA", - "dna_sequence_length": 606, - "functions": [ - "aerobic ubiquinone synthesis protein, SCP2 family protein" - ], - "id": "CDS_3770", - "location": [ - [ - "NC_000913", - 4019624, - "+", - 606 - ] - ], - "md5": "01c5529172d70cce985c902d94a52062", - "parent_gene": "", - "protein_md5": "8f5dbbc9c3b11a9b12031fee80283b10", - "protein_translation": "MPFKPLVTAGIESLLNTFLYRSPALKTARSRLLGKVLRVEVKGFSTSLILVFSERQVDVLGEWAGDADCTVIAYASVLPKLRDRQQLTALIRSGELEVQGDIQVVQNFVALADLAEFDPAELLAPYTGDIAAEGISKAMRGGAKFLHHGIKRQQRYVAEAITEEWRMAPGPLEVAWFAEETAAVERAVDALTKRLEKLEAK", - "protein_translation_length": 201, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0012539" - ], - [ - "gene_synonym", - "b3835" - ], - [ - "gene_synonym", - "GeneID:948322" - ], - [ - "gene_synonym", - "EcoGene:EG11476" - ], - [ - "gene_synonym", - "NP_418279.1" - ], - [ - "gene_synonym", - "JW3812" - ], - [ - "gene_synonym", - "ECK3829" - ], - [ - "gene_synonym", - "yigS" - ], - [ - "gene_synonym", - "yigR" - ], - [ - "gene_synonym", - "yigQ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6A0" - ], - [ - "gene_synonym", - "ubiB" - ], - [ - "gene_synonym", - "aarF" - ], - [ - "gene_synonym", - "GI:16131684" - ] - ], - "dna_sequence": "ATGACGCCAGGTGAAGTACGGCGCCTATATTTCATCATTCGCACTTTTTTAAGCTACGGACTTGATGAACTGATCCCCAAAATGCGTATCACCCTGCCGCTACGGCTATGGCGATACTCATTATTCTGGATGCCAAATCGGCATAAAGACAAACTTTTAGGTGAGCGACTACGACTGGCCCTGCAAGAACTGGGGCCGGTTTGGATCAAGTTCGGGCAAATGTTATCAACCCGCCGCGATCTTTTTCCACCGCATATTGCCGATCAGCTGGCGTTATTGCAGGACAAAGTTGCTCCGTTTGATGGCAAGCTGGCGAAGCAGCAGATTGAAGCTGCAATGGGCGGCTTGCCGGTAGAAGCGTGGTTTGACGATTTTGAAATCAAGCCGCTGGCTTCTGCTTCTATCGCCCAGGTTCATACCGCGCGATTGAAATCGAATGGTAAAGAGGTGGTGATTAAAGTCATCCGCCCGGATATTTTGCCGGTTATTAAAGCGGATCTGAAACTTATCTACCGTCTGGCTCGCTGGGTGCCGCGTTTGCTGCCGGATGGTCGCCGTCTGCGCCCAACCGAAGTGGTGCGCGAGTACGAAAAGACATTGATTGATGAACTGAATTTGCTGCGGGAATCTGCCAACGCCATTCAGCTTCGGCGCAATTTTGAAGACAGCCCGATGCTCTACATCCCGGAAGTTTACCCTGACTATTGTAGTGAAGGGATGATGGTGATGGAGCGCATTTACGGCATTCCGGTGTCTGATGTTGCGGCGCTGGAGAAAAACGGCACTAACATGAAATTGCTGGCGGAACGCGGCGTGCAGGTGTTCTTCACTCAGGTCTTTCGCGACAGCTTTTTCCATGCCGATATGCACCCTGGCAACATCTTCGTAAGCTATGAACACCCGGAAAACCCGAAATATATCGGCATTGATTGCGGGATTGTTGGCTCGCTAAACAAAGAAGATAAACGCTATCTGGCAGAAAACTTTATCGCCTTCTTTAATCGCGACTATCGCAAAGTGGCAGAGCTACACGTCGATTCTGGCTGGGTGCCACCAGATACCAACGTTGAAGAGTTCGAATTTGCCATTCGTACGGTCTGTGAACCTATCTTTGAGAAACCGCTGGCCGAAATTTCGTTTGGACATGTACTGTTAAATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGCGCTGGTGAGAGCATTTAAAGAAAAAGCGCCGTTCTGGGTCGAAAAAATGCCAGAACTGCCTGAATTGGTTTACGACAGTTTGCGCCAGGGCAAGTATTTACAGCACAGTGTTGATAAGATTGCCCGCGAGCTTCAGTCAAATCATGTACGTCAGGGACAATCGCGTTATTTTCTCGGAATTGGCGCTACGTTAGTATTAAGTGGCACATTCTTGTTGGTCAGCCGACCTGAATGGGGGCTGATGCCCGGCTGGTTAATGGCAGGTGGTCTGATCGCCTGGTTTGTCGGTTGGCGCAAAACACGCTGA", 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"protein_translation_length": 546, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3836" - ], - [ - "gene_synonym", - "JW3813" - ], - [ - "gene_synonym", - "mttA1" - ], - [ - "gene_synonym", - "GI:90111653" - ], - [ - "gene_synonym", - "ECK3830" - ], - [ - "gene_synonym", - "EcoGene:EG11478" - ], - [ - "gene_synonym", - "NP_418280.4" - ], - [ - "gene_synonym", - "tatA" - ], - [ - "gene_synonym", - "yigT" - ], - [ - "gene_synonym", - "ASAP:ABE-0012541" - ], - [ - "gene_synonym", - "GeneID:948321" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69428" - ] - ], - "dna_sequence": "ATGGGTGGTATCAGTATTTGGCAGTTATTGATTATTGCCGTCATCGTTGTACTGCTTTTTGGCACCAAAAAGCTCGGCTCCATCGGTTCCGATCTTGGTGCGTCGATCAAAGGCTTTAAAAAAGCAATGAGCGATGATGAACCAAAGCAGGATAAAACCAGTCAGGATGCTGATTTTACTGCGAAAACTATCGCCGATAAGCAGGCGGATACGAATCAGGAACAGGCTAAAACAGAAGACGCGAAGCGCCACGATAAAGAGCAGGTGTAA", - "dna_sequence_length": 270, - "functions": [ - "TatABCE protein translocation system subunit" - ], - "id": "CDS_3772", - "location": [ - [ - "NC_000913", - 4021945, - "+", - 270 - ] - ], - "md5": "c44c2f8aaba3971a6de1a896051483cb", - "parent_gene": "", - "protein_md5": "ac2c9754009c0175b55045aa01e09970", - "protein_translation": "MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMSDDEPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDKEQV", - "protein_translation_length": 89, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14322" - ], - [ - "gene_synonym", - "mttA2" - ], - [ - "gene_synonym", - "ECK3831" - ], - [ - "gene_synonym", - "ysgB" - ], - [ - "gene_synonym", - "YP_026270.1" - ], - [ - "gene_synonym", - "b3838" - ], - [ - "gene_synonym", - "ASAP:ABE-0012545" - ], - [ - "gene_synonym", - "GI:49176428" - ], - [ - "gene_synonym", - "GeneID:948319" - ], - [ - "gene_synonym", - "JW5580" - ], - [ - "gene_synonym", - "tatB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69425" - ] - ], - "dna_sequence": "GTGTTTGATATCGGTTTTAGCGAACTGCTATTGGTGTTCATCATCGGCCTCGTCGTTCTGGGGCCGCAACGACTGCCTGTGGCGGTAAAAACGGTAGCGGGCTGGATTCGCGCGTTGCGTTCACTGGCGACAACGGTGCAGAACGAACTGACCCAGGAGTTAAAACTCCAGGAGTTTCAGGACAGTCTGAAAAAGGTTGAAAAGGCGAGCCTCACTAACCTGACGCCCGAACTGAAAGCGTCGATGGATGAACTACGCCAGGCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGGCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTTCGTCGAGTGATAAACCGTAA", - "dna_sequence_length": 516, - "functions": [ - "TatABCE protein translocation system subunit" - ], - "id": "CDS_3773", - "location": [ - [ - "NC_000913", - 4022218, - "+", - 516 - ] - ], - "md5": "bc9846e491817561f35a9b488b3ed3bf", - "parent_gene": "", - "protein_md5": "ad6fe68d5b34d08fd56a94be408e0e64", - "protein_translation": "MFDIGFSELLLVFIIGLVVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQDSLKKVEKASLTNLTPELKASMDELRQAAESMKRSYVANDPEKASDEAHTIHNPVVKDNEAAHEGVTPAAAQTQASSPEQKPETTPEPVVKPAADAEPKTAAPSPSSSDKP", - "protein_translation_length": 171, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3815" - ], - [ - "gene_synonym", - "mttB" - ], - [ - "gene_synonym", - "ASAP:ABE-0012547" - ], - [ - "gene_synonym", - "ECK3832" - ], - [ - "gene_synonym", - "EcoGene:EG11479" - ], - [ - "gene_synonym", - "GeneID:948328" - ], - [ - "gene_synonym", - "b3839" - ], - [ - "gene_synonym", - "yigV" - ], - [ - "gene_synonym", - "yigU" - ], - [ - "gene_synonym", - "tatC" - ], - [ - "gene_synonym", - "GI:16131687" - ], - [ - "gene_synonym", - "NP_418282.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69423" - ] - ], - "dna_sequence": "ATGTCTGTAGAAGATACTCAACCGCTTATCACGCATCTGATTGAGCTGCGTAAGCGTCTGCTGAACTGCATTATCGCGGTGATCGTGATATTCCTGTGTCTGGTCTATTTCGCCAATGACATCTATCACCTGGTATCCGCGCCATTGATCAAGCAGTTGCCGCAAGGTTCAACGATGATCGCCACCGACGTGGCCTCGCCGTTCTTTACGCCGATCAAGCTGACCTTTATGGTGTCGCTGATTCTGTCAGCGCCGGTGATTCTCTATCAGGTGTGGGCATTTATCGCCCCAGCGCTGTATAAGCATGAACGTCGCCTGGTGGTGCCGCTGCTGGTTTCCAGCTCTCTGCTGTTTTATATCGGCATGGCATTCGCCTACTTTGTGGTCTTTCCGCTGGCATTTGGCTTCCTTGCCAATACCGCGCCGGAAGGGGTGCAGGTATCCACCGACATCGCCAGCTATTTAAGCTTCGTTATGGCGCTGTTTATGGCGTTTGGTGTCTCCTTTGAAGTGCCGGTAGCAATTGTGCTGCTGTGCTGGATGGGGATTACCTCGCCAGAAGACTTACGCAAAAAACGCCCGTATGTGCTGGTTGGTGCATTCGTTGTCGGGATGTTGCTGACGCCGCCGGATGTCTTCTCGCAAACGCTGTTGGCGATCCCGATGTACTGTCTGTTTGAAATCGGTGTCTTCTTCTCACGCTTTTACGTTGGTAAAGGGCGAAATCGGGAAGAGGAAAACGACGCTGAAGCAGAAAGCGAAAAAACTGAAGAATAA", - "dna_sequence_length": 777, - "functions": [ - "TatABCE protein translocation system subunit" - ], - "id": "CDS_3774", - "location": [ - [ - "NC_000913", - 4022736, - "+", - 777 - ] - ], - "md5": "3b60bb2f7cd03ea1d44de2737b55686e", - "parent_gene": "", - "protein_md5": "d13b96f277bdc0e5fde0c1cb180b1c95", - "protein_translation": "MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHLVSAPLIKQLPQGSTMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKHERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMALFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLLAIPMYCLFEIGVFFSRFYVGKGRNREEENDAEAESEKTEE", - "protein_translation_length": 258, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "mttC" - ], - [ - "gene_synonym", - "YP_026271.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0174116" - ], - [ - "gene_synonym", - "tatD" - ], - [ - "gene_synonym", - "ECK3833" - ], - [ - "gene_synonym", - "b4483" - ], - [ - "gene_synonym", - "GeneID:2847752" - ], - [ - "gene_synonym", - "EcoGene:EG11481" - ], - [ - "gene_synonym", - "yigW" - ], - [ - "gene_synonym", - "GI:49176429" - ], - [ - "gene_synonym", - "JW5931" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27859" - ], - [ - "gene_synonym", - "yigX" - ] - ], - "dna_sequence": "ATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAGCCAGCAGGCGCAAAAGCTGGCGCGTCAGTATTCGTCCTGTTGGTCAACGGCGGGCGTACATCCTCACGACAGCAGCCAGTGGCAAGCTGCGACTGAAGAAGCGATTATTGAGCTGGCCGCGCAGCCAGAAGTGGTGGCGATTGGTGAATGTGGTCTCGACTTTAACCGCAACTTTTCGACGCCGGAAGAGCAGGAACGCGCTTTTGTTGCCCAGCTACGCATTGCCGCAGATTTAAACATGCCGGTATTTATGCACTGTCGCGATGCCCACGAGCGGTTTATGACATTGCTGGAGCCGTGGCTGGATAAACTGCCTGGTGCGGTTCTTCATTGCTTTACCGGCACACGCGAAGAGATGCAGGCGTGCGTGGCGCATGGAATTTATATCGGCATTACCGGTTGGGTTTGCGATGAACGACGCGGACTGGAGCTGCGGGAACTTTTGCCGTTGATTCCGGCGGAAAAATTACTGATCGAAACTGATGCGCCGTATCTGCTCCCTCGCGATCTCACGCCAAAGCCATCATCCCGGCGCAACGAGCCAGCCCATCTGCCCCATATTTTGCAACGTATTGCGCACTGGCGTGGAGAAGATGCCGCATGGCTGGCTGCCACCACGGATGCTAATGTCAAAACACTGTTTGGGATTGCGTTTTAG", - "dna_sequence_length": 783, - "functions": [ - "quality control of Tat-exported FeS proteins", - "Mg-dependent cytoplasmic DNase" - ], - "id": "CDS_3775", - "location": [ - [ - "NC_000913", - 4023554, - "+", - 783 - ] - ], - "md5": "fa27e9d33537d18b9f48d2f11bbb471e", - "parent_gene": "", - "protein_md5": "bc62515b3acdc2240a05383f5c222af8", - "protein_translation": "MFDIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGIAF", - "protein_translation_length": 260, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418284.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFW0" - ], - [ - "gene_synonym", - "EcoGene:EG10839" - ], - [ - "gene_synonym", - "sfrB" - ], - [ - "gene_synonym", - "ECK3834" - ], - [ - "gene_synonym", - "JW3818" - ], - [ - "gene_synonym", - "b3842" - ], - [ - "gene_synonym", - "GI:16131688" - ], - [ - "gene_synonym", - "ASAP:ABE-0012553" - ], - [ - "gene_synonym", - "rfaH" - ], - [ - "gene_synonym", - "GeneID:948327" - ], - [ - "gene_synonym", - "hlyT" - ] - ], - "dna_sequence": "ATGCAATCCTGGTATTTACTGTACTGCAAGCGCGGGCAACTTCAACGTGCCCAGGAACACCTCGAAAGACAGGCTGTGAATTGCCTGGCACCGATGATCACCCTGGAAAAAATCGTGCGTGGAAAACGTACTGCAGTCAGTGAGCCATTGTTCCCCAACTACCTGTTTGTGGAATTTGACCCAGAAGTGATTCATACCACGACTATCAACGCGACCCGCGGTGTCAGCCACTTCGTGCGCTTTGGCGCGTCGCCAGCGATAGTCCCATCGGCGGTTATTCATCAGCTATCGGTATATAAACCGAAAGACATTGTCGATCCGGCAACCCCTTATCCGGGTGATAAGGTGATTATTACCGAAGGCGCGTTCGAAGGCTTTCAGGCCATTTTCACCGAACCCGATGGTGAGGCTCGCTCCATGCTATTGCTTAATCTTATTAATAAAGAGATTAAGCACAGTGTGAAGAATACCGAGTTCCGCAAACTCTAA", - "dna_sequence_length": 489, - "functions": [ - "transcription antitermination protein" - ], - "id": "CDS_3776", - "location": [ - [ - "NC_000913", - 4024821, - "-", - 489 - ] - ], - "md5": "0262aa260fa23965ed0595c6d7e9ce9c", - "parent_gene": "", - "protein_md5": "715f6a36cd2c3556526a6e82f0038c29", - "protein_translation": "MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPKDIVDPATPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFRKL", - "protein_translation_length": 162, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAB4" - ], - [ - "gene_synonym", - "yigC" - ], - [ - "gene_synonym", - "ASAP:ABE-0012557" - ], - [ - "gene_synonym", - "JW3819" - ], - [ - "gene_synonym", - "ECK3835" - ], - [ - "gene_synonym", - "NP_418285.1" - ], - [ - "gene_synonym", - "b3843" - ], - [ - "gene_synonym", - "GI:16131689" - ], - [ - "gene_synonym", - "ubiD" - ], - [ - "gene_synonym", - "GeneID:948326" - ], - [ - "gene_synonym", - "yigY" - ], - [ - "gene_synonym", - "EcoGene:EG11396" - ] - ], - "dna_sequence": "ATGGACGCCATGAAATATAACGATTTACGCGACTTCTTGACGCTGCTTGAACAGCAGGGTGAGCTAAAACGTATCACGCTCCCGGTGGATCCGCATCTGGAAATCACTGAAATTGCTGACCGCACTTTGCGTGCCGGTGGGCCTGCGCTGTTGTTCGAAAACCCTAAAGGCTACTCAATGCCGGTGCTGTGCAACCTGTTCGGTACGCCAAAGCGCGTGGCGATGGGCATGGGGCAGGAAGATGTTTCGGCGCTGCGTGAAGTTGGTAAATTATTGGCGTTTCTGAAAGAGCCGGAGCCGCCAAAAGGTTTCCGCGACCTGTTTGATAAACTGCCGCAGTTTAAGCAAGTATTGAACATGCCGACAAAGCGGCTGCGTGGTGCGCCCTGCCAACAAAAAATCGTCTCTGGCGATGACGTCGATCTCAATCGCATTCCCATTATGACCTGCTGGCCGGAAGATGCCGCGCCGCTGATTACCTGGGGGCTGACAGTGACGCGCGGCCCACATAAAGAGCGGCAGAATCTGGGCATTTATCGCCAGCAGCTGATTGGTAAAAACAAACTGATTATGCGCTGGCTGTCGCATCGCGGCGGCGCGCTGGATTATCAGGAGTGGTGTGCGGCGCATCCGGGCGAACGTTTCCCGGTTTCTGTGGCGCTGGGTGCCGATCCCGCCACGATTCTCGGTGCAGTCACTCCCGTTCCGGATACGCTTTCAGAGTATGCGTTTGCCGGATTGCTACGTGGCACCAAGACCGAAGTGGTGAAGTGTATCTCCAATGATCTTGAAGTGCCCGCCAGTGCGGAGATTGTGCTGGAAGGGTATATCGAACAAGGCGAAACTGCGCCGGAAGGGCCGTATGGCGACCACACCGGTTACTATAATGAAGTCGATAGTTTCCCGGTATTTACCGTGACGCATATTACCCAGCGTGAAGATGCGATTTACCATTCCACCTATACCGGGCGTCCGCCAGATGAGCCCGCGGTGCTGGGTGTCGCACTGAACGAAGTGTTTGTGCCGATTCTGCAAAAACAGTTCCCGGAAATTGTCGATTTTTACCTGCCGCCGGAAGGCTGCTCTTATCGCCTGGCGGTAGTGACAATCAAAAAACAGTACGCCGGACACGCGAAGCGCGTCATGATGGGCGTCTGGTCGTTCTTACGCCAGTTTATGTACACTAAATTTGTGATCGTTTGCGATGATGACGTTAACGCACGCGACTGGAACGATGTGATTTGGGCGATTACCACCCGTATGGACCCGGCGCGGGATACTGTTCTGGTAGAAAATACGCCTATTGATTATCTGGATTTTGCCTCGCCTGTCTCCGGGCTGGGTTCAAAAATGGGGCTGGATGCCACGAATAAATGGCCGGGGGAAACCCAGCGTGAATGGGGACGTCCCATCAAAAAAGATCCAGATGTTGTCGCGCATATTGACGCCATCTGGGATGAACTGGCTATTTTTAACAACGGTAAAAGCGCCTGA", 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[ - "gene_synonym", - "fre" - ], - [ - "gene_synonym", - "hsm-6" - ], - [ - "gene_synonym", - "ECK3836" - ], - [ - "gene_synonym", - "NP_418286.1" - ], - [ - "gene_synonym", - "b3844" - ], - [ - "gene_synonym", - "fsrC" - ], - [ - "gene_synonym", - "EcoGene:EG10334" - ], - [ - "gene_synonym", - "GI:16131690" - ], - [ - "gene_synonym", - "flrD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEN1" - ], - [ - "gene_synonym", - "fadI" - ], - [ - "gene_synonym", - "GeneID:948325" - ] - ], - "dna_sequence": "ATGACAACCTTAAGCTGTAAAGTGACCTCGGTAGAAGCTATCACGGATACCGTATATCGTGTCCGCATCGTGCCAGACGCGGCCTTTTCTTTTCGTGCTGGTCAGTATTTGATGGTAGTGATGGATGAGCGCGACAAACGTCCGTTCTCAATGGCTTCGACGCCGGATGAAAAAGGGTTTATCGAGCTGCATATTGGCGCTTCTGAAATCAACCTTTACGCGAAAGCAGTCATGGACCGCATCCTCAAAGATCATCAAATCGTGGTCGACATTCCCCACGGAGAAGCGTGGCTGCGCGATGATGAAGAGCGTCCGATGATTTTGATTGCGGGCGGCACCGGGTTCTCTTATGCCCGCTCGATTTTGCTGACAGCGTTGGCGCGTAACCCAAACCGTGATATCACCATTTACTGGGGCGGGCGTGAAGAGCAGCATCTGTATGATCTCTGCGAGCTTGAGGCGCTTTCGTTGAAGCATCCTGGTCTGCAAGTGGTGCCGGTGGTTGAACAACCGGAAGCGGGCTGGCGTGGGCGTACTGGCACCGTGTTAACGGCGGTATTGCAGGATCACGGTACGCTGGCAGAGCATGATATCTATATTGCCGGACGTTTTGAGATGGCGAAAATTGCCCGCGATCTGTTTTGCAGTGAGCGTAATGCGCGGGAAGATCGCCTGTTTGGCGATGCGTTTGCATTTATCTGA", - "dna_sequence_length": 702, - "functions": [ - "NAD(P)H-flavin reductase" - ], - "id": "CDS_3778", - "location": [ - [ - "NC_000913", - 4026527, - "+", - 702 - ] - ], - "md5": "9d423042d07f4b888578c9a983743696", - "parent_gene": "", - "protein_md5": "b6cb369f06acaecc00322377c74e9f11", - "protein_translation": "MTTLSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDERDKRPFSMASTPDEKGFIELHIGASEINLYAKAVMDRILKDHQIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGREEQHLYDLCELEALSLKHPGLQVVPVVEQPEAGWRGRTGTVLTAVLQDHGTLAEHDIYIAGRFEMAKIARDLFCSERNAREDRLFGDAFAFI", - "protein_translation_length": 233, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5578" - ], - [ - "gene_synonym", - "ASAP:ABE-0012562" - ], - [ - "gene_synonym", - "ECK3837" - ], - [ - "gene_synonym", - "oldA" - ], - [ - "gene_synonym", - "fadA" - ], - [ - "gene_synonym", - "b3845" - ], - [ - "gene_synonym", - "GeneID:948324" - ], - [ - "gene_synonym", - "EcoGene:EG10278" - ], - [ - "gene_synonym", - "GI:49176430" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21151" - ], - [ - "gene_synonym", - "YP_026272.1" - ] - ], - "dna_sequence": "ATGGAACAGGTTGTCATTGTCGATGCAATTCGCACCCCGATGGGCCGTTCGAAGGGCGGTGCTTTTCGTAACGTGCGTGCAGAAGATCTCTCCGCTCATTTAATGCGTAGCCTGCTGGCGCGTAACCCGGCGCTGGAAGCGGCGGCCCTCGACGATATTTACTGGGGTTGTGTGCAGCAGACGCTGGAGCAGGGTTTTAATATCGCCCGTAACGCGGCGCTGCTGGCAGAAGTACCACACTCTGTCCCGGCGGTTACCGTTAATCGCTTGTGTGGTTCATCCATGCAGGCACTGCATGACGCAGCACGAATGATCATGACTGGCGATGCGCAGGCATGTCTGGTTGGCGGCGTGGAGCATATGGGCCATGTGCCGATGAGTCACGGCGTCGATTTTCACCCCGGCCTGAGCCGCAATGTCGCCAAAGCGGCGGGCATGATGGGCTTAACGGCAGAAATGCTGGCGCGTATGCACGGTATCAGCCGTGAAATGCAGGATGCCTTTGCCGCGCGGTCACACGCCCGCGCCTGGGCCGCCACGCAGTCGGCCGCATTTAAAAATGAAATCATCCCGACCGGTGGTCACGATGCCGACGGCGTCCTGAAGCAGTTTAATTACGACGAAGTGATTCGCCCGGAAACCACCGTGGAAGCCCTCGCCACGCTGCGTCCGGCGTTTGATCCAGTAAACGGTATGGTAACGGCGGGCACATCTTCTGCACTTTCCGATGGCGCAGCTGCCATGCTGGTGATGAGTGAAAGCCGCGCCCATGAATTAGGTCTTAAGCCGCGCGCTCGTGTGCGTTCGATGGCGGTCGTTGGTTGTGACCCATCGATTATGGGTTACGGCCCGGTTCCGGCCTCGAAACTGGCGCTGAAAAAAGCGGGGCTTTCTGCCAGCGATATCGGCGTGTTTGAAATGAACGAAGCCTTTGCCGCGCAGATCCTGCCATGTATTAAAGATCTGGGACTAATTGAGCAGATTGACGAGAAGATCAACCTCAACGGTGGCGCGATCGCGCTGGGTCATCCGCTGGGTTGTTCCGGTGCGCGTATCAGCACCACGCTGCTGAATCTGATGGAACGCAAAGACGTTCAGTTTGGTCTGGCGACGATGTGTATCGGTCTGGGTCAGGGTATTGCGACGGTGTTTGAGCGGGTTTAA", - "dna_sequence_length": 1164, - "functions": [ - "3-ketoacyl-CoA thiolase (thiolase I)" - ], - "id": "CDS_3779", - "location": [ - [ - "NC_000913", - 4028772, - "-", - 1164 - ] - ], - "md5": "d3efc864422c8d1b308b2d6232da04da", - "parent_gene": "", - "protein_md5": "4c1e921f643d6dd26bce3be0fd008021", - "protein_translation": "MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGISREMQDAFAARSHARAWAATQSAAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEALATLRPAFDPVNGMVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLIEQIDEKINLNGGAIALGHPLGCSGARISTTLLNLMERKDVQFGLATMCIGLGQGIATVFERV", - "protein_translation_length": 387, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3838" - ], - [ - "gene_synonym", - "JW3822" - ], - [ - "gene_synonym", - "EcoGene:EG10279" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21177" - ], - [ - "gene_synonym", - "b3846" - ], - [ - "gene_synonym", - "fadB" - ], - [ - "gene_synonym", - "oldB" - ], - [ - "gene_synonym", - "GI:16131692" - ], - [ - "gene_synonym", - "NP_418288.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012564" - ], - [ - "gene_synonym", - "GeneID:948336" - ] - ], - "dna_sequence": "ATGCTTTACAAAGGCGACACCCTGTACCTTGACTGGCTGGAAGATGGCATTGCCGAACTGGTATTTGATGCCCCAGGTTCAGTTAATAAACTCGACACTGCGACCGTCGCCAGCCTCGGCGAGGCCATCGGCGTGCTGGAACAGCAATCAGATCTAAAAGGGCTGCTGCTGCGTTCGAACAAAGCAGCCTTTATCGTCGGTGCTGATATCACCGAATTTTTGTCCCTGTTCCTCGTTCCTGAAGAACAGTTAAGTCAGTGGCTGCACTTTGCCAATAGCGTGTTTAATCGCCTGGAAGATCTGCCGGTGCCGACCATTGCTGCCGTCAATGGCTATGCGCTGGGCGGTGGCTGCGAATGCGTGCTGGCGACCGATTATCGTCTGGCGACGCCGGATCTGCGCATCGGTCTGCCGGAAACCAAACTGGGCATCATGCCTGGCTTTGGCGGTTCTGTACGTATGCCACGTATGCTGGGCGCTGACAGTGCGCTGGAAATCATTGCCGCCGGTAAAGATGTCGGCGCGGATCAGGCGCTGAAAATCGGTCTGGTGGATGGCGTAGTCAAAGCAGAAAAACTGGTTGAAGGCGCAAAGGCGGTTTTACGCCAGGCCATTAACGGCGACCTCGACTGGAAAGCAAAACGTCAGCCGAAGCTGGAACCACTAAAACTGAGCAAGATTGAAGCCACCATGAGCTTCACCATCGCTAAAGGGATGGTCGCACAAACAGCGGGGAAACATTATCCGGCCCCCATCACCGCAGTAAAAACCATTGAAGCTGCGGCCCGTTTTGGTCGTGAAGAAGCCTTAAACCTGGAAAACAAAAGTTTTGTCCCGCTGGCGCATACCAACGAAGCCCGCGCACTGGTCGGCATTTTCCTTAACGATCAATATGTAAAAGGCAAAGCGAAGAAACTCACCAAAGACGTTGAAACCCCGAAACAGGCCGCGGTGCTGGGTGCAGGCATTATGGGCGGCGGCATCGCTTACCAGTCTGCGTGGAAAGGCGTGCCGGTTGTCATGAAAGATATCAACGACAAGTCGTTAACCCTCGGCATGACCGAAGCCGCGAAACTGCTGAACAAGCAGCTTGAGCGCGGCAAGATCGATGGTCTGAAACTGGCTGGCGTGATCTCCACAATCCACCCAACGCTCGACTACGCCGGATTTGACCGCGTGGATATTGTGGTAGAAGCGGTTGTTGAAAACCCGAAAGTGAAAAAAGCCGTACTGGCAGAAACCGAACAAAAAGTACGCCAGGATACCGTGCTGGCGTCTAACACTTCAACCATTCCTATCAGCGAACTGGCCAACGCGCTGGAACGCCCGGAAAACTTCTGCGGGATGCACTTCTTTAACCCGGTCCACCGAATGCCGTTGGTAGAAATTATTCGCGGCGAGAAAAGCTCCGACGAAACCATCGCGAAAGTTGTCGCCTGGGCGAGCAAGATGGGCAAGACGCCGATTGTGGTTAACGACTGCCCCGGCTTCTTTGTTAACCGCGTGCTGTTCCCGTATTTCGCCGGTTTCAGCCAGCTGCTGCGCGACGGCGCGGATTTCCGCAAGATCGACAAAGTGATGGAAAAACAGTTTGGCTGGCCGATGGGCCCGGCATATCTGCTGGACGTTGTGGGCATTGATACCGCGCATCACGCTCAGGCTGTCATGGCAGCAGGCTTCCCGCAGCGGATGCAGAAAGATTACCGCGATGCCATCGACGCGCTGTTTGATGCCAACCGCTTTGGTCAGAAGAACGGCCTCGGTTTCTGGCGTTATAAAGAAGACAGCAAAGGTAAGCCGAAGAAAGAAGAAGACGCCGCCGTTGAAGACCTGCTGGCAGAAGTGAGCCAGCCGAAGCGCGATTTCAGCGAAGAAGAGATTATCGCCCGCATGATGATCCCGATGGTCAACGAAGTGGTGCGCTGTCTGGAGGAAGGCATTATCGCCACTCCGGCGGAAGCGGATATGGCGCTGGTCTACGGCCTGGGCTTCCCTCCGTTCCACGGCGGCGCGTTCCGCTGGCTGGACACCCTCGGTAGCGCAAAATACCTCGATATGGCACAGCAATATCAGCACCTCGGCCCGCTGTATGAAGTGCCGGAAGGTCTGCGTAATAAAGCGCGTCATAACGAACCGTACTATCCTCCGGTTGAGCCAGCCCGTCCGGTTGGCGACCTGAAAACGGCTTAA", - "dna_sequence_length": 2190, - "functions": [ - "fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase" - ], - "id": "CDS_3780", - "location": [ - [ - "NC_000913", - 4030971, - "-", - 2190 - ] - ], - "md5": "8690e3f1ceab4edb38d0bab6138a2a02", - "parent_gene": "", - "protein_md5": "691beae5474d0955d171086479b56197", - "protein_translation": "MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPKLEPLKLSKIEATMSFTIAKGMVAQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQYVKGKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDIVVEAVVENPKVKKAVLAETEQKVRQDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKPKKEEDAAVEDLLAEVSQPKRDFSEEEIIARMMIPMVNEVVRCLEEGIIATPAEADMALVYGLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPARPVGDLKTA", - "protein_translation_length": 729, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3839" - ], - [ - "gene_synonym", - "JW3823" - ], - [ - "gene_synonym", - "EcoGene:EG10698" - ], - [ - "gene_synonym", - "b3847" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21165" - ], - [ - "gene_synonym", - "NP_418289.1" - ], - [ - "gene_synonym", - "GI:16131693" - ], - [ - "gene_synonym", - "pepQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0012569" - ], - [ - "gene_synonym", - "GeneID:948335" - ] - ], - "dna_sequence": "ATGGAATCACTGGCCTCGCTCTATAAAAATCATATAGCTACCTTACAAGAACGGACTCGCGATGCGCTGGCGCGCTTCAAGCTGGATGCGTTACTTATTCACTCCGGCGAGCTGTTCAATGTTTTTCTCGACGATCATCCCTATCCGTTTAAAGTGAACCCGCAATTCAAAGCGTGGGTGCCGGTAACTCAGGTGCCAAACTGCTGGTTGCTGGTGGATGGCGTGAACAAGCCGAAACTGTGGTTCTATCTGCCGGTTGATTACTGGCACAACGTCGAACCGCTGCCGACCTCTTTCTGGACTGAAGATGTGGAAGTGATCGCGCTGCCGAAAGCCGATGGCATTGGTAGCCTGCTGCCTGCTGCGCGCGGCAATATCGGTTATATCGGTCCGGTGCCGGAACGTGCGCTGCAACTGGGTATTGAGGCCAGCAACATCAACCCGAAAGGGGTTATCGACTACCTGCATTACTATCGCTCCTTCAAAACTGAGTACGAACTGGCCTGTATGCGTGAAGCGCAGAAAATGGCGGTCAACGGTCACCGCGCGGCAGAAGAAGCGTTCCGTTCTGGCATGAGCGAGTTCGATATCAACATTGCCTATCTGACCGCGACCGGTCATCGTGATACCGACGTACCTTACAGCAACATTGTGGCGCTTAACGAACACGCTGCGGTACTGCATTACACCAAACTGGACCATCAGGCACCGGAAGAGATGCGCAGCTTCCTGCTGGATGCCGGGGCAGAATATAACGGCTATGCGGCTGACCTGACCCGTACCTGGTCGGCAAAAAGTGACAACGACTACGCGCAGCTGGTGAAGGACGTTAATGATGAACAACTGGCGCTGATCGCCACCATGAAAGCAGGCGTCAGCTATGTGGATTACCACATCCAGTTCCATCAGCGCATCGCCAAACTGCTGCGTAAACATCAAATCATCACCGATATGAGTGAAGAAGCGATGGTCGAAAACGATCTTACCGGGCCGTTTATGCCGCATGGTATCGGCCATCCGCTGGGCCTGCAGGTGCATGACGTCGCTGGTTTTATGCAGGATGATAGCGGTACGCACCTCGCGGCACCGGCAAAATATCCGTACCTGCGCTGCACCCGTATTCTCCAGCCGGGCATGGTGTTAACCATCGAACCGGGTATCTACTTCATCGAATCGCTACTGGCACCGTGGCGTGAAGGGCAGTTCAGCAAGCACTTCAACTGGCAGAAAATTGAAGCACTGAAACCGTTCGGCGGCATTCGTATCGAAGACAACGTGGTGATCCACGAAAACAACGTGGAAAACATGACCCGGGATCTGAAACTGGCGTGA", - "dna_sequence_length": 1332, - "functions": [ - "proline dipeptidase" - ], - "id": "CDS_3781", - "location": [ - [ - "NC_000913", - 4031161, - "+", - 1332 - ] - ], - "md5": "baa36ed002fea65e4efa30443b27bcc4", - "parent_gene": "", - "protein_md5": "65d5288c2db8222ece4e8f0eb59d4d79", - "protein_translation": "MESLASLYKNHIATLQERTRDALARFKLDALLIHSGELFNVFLDDHPYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTSFWTEDVEVIALPKADGIGSLLPAARGNIGYIGPVPERALQLGIEASNINPKGVIDYLHYYRSFKTEYELACMREAQKMAVNGHRAAEEAFRSGMSEFDINIAYLTATGHRDTDVPYSNIVALNEHAAVLHYTKLDHQAPEEMRSFLLDAGAEYNGYAADLTRTWSAKSDNDYAQLVKDVNDEQLALIATMKAGVSYVDYHIQFHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMPHGIGHPLGLQVHDVAGFMQDDSGTHLAAPAKYPYLRCTRILQPGMVLTIEPGIYFIESLLAPWREGQFSKHFNWQKIEALKPFGGIRIEDNVVIHENNVENMTRDLKLA", - "protein_translation_length": 443, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418290.4" - ], - [ - "gene_synonym", - "ECK3840" - ], - [ - "gene_synonym", - "GeneID:948334" - ], - [ - "gene_synonym", - "GI:90111654" - ], - [ - "gene_synonym", - "EcoGene:EG11484" - ], - [ - "gene_synonym", - "JW5577" - ], - [ - "gene_synonym", - "ASAP:ABE-0012571" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27862" - ], - [ - "gene_synonym", - "yigZ" - ], - [ - "gene_synonym", - "b3848" - ] - ], - "dna_sequence": "ATGGAAAGCTGGTTAATTCCTGCGGCACCGGTCACGGTCGTTGAAGAGATCAAAAAGAGCCGCTTCATAACGATGTTGGCGCATACCGATGGCGTTGAGGCGGCGAAAGCGTTTGTTGAATCGGTGCGGGCAGAACACCCCGATGCCCGGCACCATTGCGTGGCGTGGGTCGCGGGTGCGCCGGATGATTCTCAACAGCTGGGTTTCTCTGACGACGGGGAGCCGGCGGGAACGGCAGGTAAACCGATGCTCGCCCAGCTAATGGGCAGCGGCGTCGGGGAAATTACCGCTGTGGTAGTGCGCTACTACGGCGGCATATTGCTTGGCACCGGTGGGTTAGTGAAAGCGTATGGCGGCGGCGTGAATCAGGCGCTGCGCCAGCTAACGACCCAACGCAAGACGCCATTAACCGAATATACTTTGCAATGTGAATATCATCAGTTAACCGGCATTGAAGCGTTGCTGGGGCAGTGTGACGGCAAAATTATCAACAGTGATTATCAGGCATTCGTTCTGCTGCGGGTGGCGCTTCCGGCGGCGAAAGTGGCTGAATTTTCCGCAAAGCTGGCGGATTTTAGCCGTGGTTCATTGCAATTGTTAGCGATTGAAGAATAA", - "dna_sequence_length": 615, - "functions": [ - "UPF0029 family protein" - ], - "id": "CDS_3782", - "location": [ - [ - "NC_000913", - 4032492, - "+", - 615 - ] - ], - "md5": "d0b449c9bd625245e8b79bfb5bdc2843", - "parent_gene": "", - "protein_md5": "bcbf31653fee5b433fb3d87bcdbebe82", - "protein_translation": "MESWLIPAAPVTVVEEIKKSRFITMLAHTDGVEAAKAFVESVRAEHPDARHHCVAWVAGAPDDSQQLGFSDDGEPAGTAGKPMLAQLMGSGVGEITAVVVRYYGGILLGTGGLVKAYGGGVNQALRQLTTQRKTPLTEYTLQCEYHQLTGIEALLGQCDGKIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRGSLQLLAIEE", - "protein_translation_length": 204, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3841" - ], - [ - "gene_synonym", - "sapJ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFZ7" - ], - [ - "gene_synonym", - "EcoGene:EG11021" - ], - [ - "gene_synonym", - "JW5576" - ], - [ - "gene_synonym", - "trkH" - ], - [ - "gene_synonym", - "YP_026273.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012574" - ], - [ - "gene_synonym", - "GeneID:948333" - ], - [ - "gene_synonym", - "GI:49176432" - ], - [ - "gene_synonym", - "b3849" - ] - ], - "dna_sequence": "ATGCATTTTCGCGCCATTACCCGAATCGTTGGACTACTGGTCATCTTATTTTCAGGGACCATGATTATCCCTGGGCTGGTAGCACTCATCTACCGGGATGGAGCGGGCCGCGCTTTTACCCAGACCTTTTTTGTCGCCCTCGCCATTGGCTCTATGCTGTGGTGGCCGAACCGCAAAGAGAAAGGCGAACTTAAATCCCGTGAGGGGTTTCTGATAGTGGTGCTGTTCTGGACCGTGCTGGGTAGCGTCGGTGCGCTCCCTTTTATCTTCTCGGAAAGCCCGAACCTCACGATTACCGATGCGTTTTTTGAATCTTTCTCTGGCCTGACCACTACGGGAGCCACTACGCTGGTGGGGCTGGATTCGCTCCCTCACGCCATCCTCTTTTATCGCCAGATGCTGCAATGGTTTGGCGGGATGGGGATCATCGTGTTGGCGGTTGCGATACTGCCTATCCTCGGCGTGGGTGGGATGCAGCTCTATCGCGCAGAAATGCCCGGCCCGCTGAAAGATAACAAAATGCGCCCGCGAATTGCGGAAACGGCGAAAACCCTGTGGTTGATTTATGTCTTGCTGACCGTCGCCTGTGCGCTGGCGTTGTGGTTTGCCGGAATGGATGCCTTTGATGCCATCGGCCATAGCTTTGCGACTATCGCTATTGGCGGCTTCTCGACACATGATGCCAGTATCGGTTATTTCGATAGCCCGACTATTAACACTATCATTGCTATCTTCCTGCTGATCTCCGGCTGTAACTACGGTCTGCACTTTTCACTGTTAAGTGGGCGTAGTCTGAAGGTTTATTGGCGCGATCCGGAATTTCGCATGTTTATCGGCGTACAGTTTACGCTGGTGGTTATTTGTACCCTCGTACTGTGGTTTCATAATGTCTACAGTTCGGCGCTGATGACAATTAACCAGGCGTTTTTCCAGGTGGTGTCGATGGCGACAACCGCCGGGTTTACAACTGACAGCATTGCCCGCTGGCCGCTCTTTTTGCCGGTACTGCTTTTATGTTCAGCCTTTATCGGCGGTTGCGCCGGGTCAACGGGCGGTGGCCTGAAGGTGATCCGCATCCTGCTGCTGTTTAAGCAGGGGAACCGTGAGCTGAAACGACTGGTGCATCCGAACGCCGTCTATAGCATTAAGCTGGGGAATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATTGGTGTTTATTGTCAGTATGCTGGCGATTATCGCCACGGGCGTGGATGACTTTTCTGCCTTTGCGTCGGTTGTTGCGACATTGAATAACCTGGGGCCAGGGCTTGGCGTGGTTGCTGATAACTTTACCAGTATGAACCCGGTGGCTAAATGGATCCTGATTGCCAACATGCTGTTTGGTCGTCTCGAGGTCTTTACATTGCTGGTGCTCTTTACCCCGACTTTCTGGCGTGAATGA", 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[ - "gene_synonym", - "EcoGene:EG11485" - ], - [ - "gene_synonym", - "yihB" - ], - [ - "gene_synonym", - "hemG" - ], - [ - "gene_synonym", - "GI:16131696" - ], - [ - "gene_synonym", - "ASAP:ABE-0012577" - ], - [ - "gene_synonym", - "b3850" - ], - [ - "gene_synonym", - "NP_418292.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACB4" - ] - ], - "dna_sequence": "GTGAAAACATTAATTCTTTTCTCAACAAGGGACGGACAAACGCGCGAGATTGCCTCCTACCTGGCTTCGGAACTGAAAGAACTGGGGATCCAGGCGGATGTCGCCAATGTGCACCGCATTGAAGAACCACAGTGGGAAAACTATGACCGTGTGGTCATTGGTGCTTCTATTCGCTATGGTCACTACCATTCAGCGTTCCAGGAATTTGTCAAAAAACATGCGACGCGGCTGAATTCGATGCCGAGCGCCTTTTACTCCGTGAATCTGGTGGCGCGCAAACCGGAGAAGCGTACTCCACAGACCAACAGCTACGCGCGCAAGTTTCTGATGAACTCGCAATGGCGTCCCGATCGCTGCGCGGTCATTGCCGGGGCGCTGCGTTACCCACGTTATCGCTGGTACGACCGTTTTATGATCAAGCTGATTATGAAGATGTCAGGCGGTGAAACGGATACGCGCAAAGAAGTTGTCTATACCGATTGGGAGCAGGTGGCGAATTTCGCCCGAGAAATCGCCCATTTAACCGACAAACCGACGCTGAAATAA", - "dna_sequence_length": 546, - "functions": [ - "protoporphyrin oxidase, flavoprotein" - ], - "id": "CDS_3784", - "location": [ - [ - "NC_000913", - 4034608, - "+", - 546 - ] - ], - "md5": "d52cc241f8d79950616fa7d73086f930", - "parent_gene": "", - "protein_md5": "ad6248831722f542f9cdf5490e57ac85", - "protein_translation": "MKTLILFSTRDGQTREIASYLASELKELGIQADVANVHRIEEPQWENYDRVVIGASIRYGHYHSAFQEFVKKHATRLNSMPSAFYSVNLVARKPEKRTPQTNSYARKFLMNSQWRPDRCAVIAGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTDWEQVANFAREIAHLTDKPTLK", - "protein_translation_length": 181, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948343" - ], - [ - "gene_synonym", - "mobB" - ], - [ - "gene_synonym", - "ECK3848" - ], - [ - "gene_synonym", - "JW5575" - ], - [ - "gene_synonym", - "yihC" - ], - [ - "gene_synonym", - "GI:145698333" - ], - [ - "gene_synonym", - "b3856" - ], - [ - "gene_synonym", - "NP_418293.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0012591" - ], - [ - "gene_synonym", - "EcoGene:EG11828" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32125" - ] - ], - "dna_sequence": "ATGGCAGGAAAAACGATGATACCGTTACTCGCCTTTGCCGCGTGGAGTGGTACCGGAAAAACTACGCTTTTGAAAAAACTGATCCCGGCATTATGCGCCAGAGGGATCCGTCCAGGGCTGATTAAGCATACGCACCATGATATGGATGTTGATAAGCCAGGCAAAGATAGCTATGAGCTGCGCAAGGCTGGCGCGGCACAAACCATCGTTGCCAGCCAGCAACGATGGGCCTTGATGACGGAAACACCAGACGAAGAAGAGCTGGATCTACAGTTTCTCGCAAGTCGAATGGATACCTCAAAGCTGGATTTGATTCTGGTCGAAGGGTTTAAGCATGAAGAGATCGCAAAGATTGTGCTGTTTCGCGATGGAGCCGGACATCGACCTGAAGAATTAGTGATAGACAGGCATGTTATTGCTGTAGCCAGTGATGTGCCGCTTAATCTTGATGTCGCATTACTGGATATTAATGATGTTGAGGGGCTGGCTGATTTTGTGGTGGAGTGGATGCAAAAGCAGAACGGATAA", - "dna_sequence_length": 528, - "functions": [ - "molybdopterin-guanine dinucleotide biosynthesis protein B" - ], - "id": "CDS_3785", - "location": [ - [ - "NC_000913", - 4041433, - "-", - 528 - ] - ], - "md5": "258b373e370f5c36952585d089eb7b46", - "parent_gene": "", - "protein_md5": "6fef7098bf0d49adc0ce6c0e8a853640", - "protein_translation": "MAGKTMIPLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTIVASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDGAGHRPEELVIDRHVIAVASDVPLNLDVALLDINDVEGLADFVVEWMQKQNG", - "protein_translation_length": 175, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418294.1" - ], - [ - "gene_synonym", - "mobA" - ], - [ - "gene_synonym", - "ECK3849" - ], - [ - "gene_synonym", - "JW3829" - ], - [ - "gene_synonym", - "GeneID:948349" - ], - [ - "gene_synonym", - "chlB" - ], - [ - "gene_synonym", - "b3857" - ], - [ - "gene_synonym", - "ASAP:ABE-0012593" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32173" - ], - [ - "gene_synonym", - "mob" - ], - [ - "gene_synonym", - "EcoGene:EG11829" - ], - [ - "gene_synonym", - "GI:16131698" - ], - [ - "gene_synonym", - "narB" - ] - ], - "dna_sequence": "GTGAATCTGATGACGACGATAACAGGCGTTGTGCTGGCAGGCGGTAAAGCCAGACGAATGGGCGGCGTAGATAAAGGATTGCTTGAATTAAACGGCAAACCATTATGGCAACATGTCGCTGACGCGCTTATGACGCAGCTCTCTCACGTCGTGGTTAATGCTAATCGTCATCAGGAAATCTATCAGGCAAGCGGTCTGAAAGTGATTGAAGATTCACTGGCGGATTACCCAGGCCCTCTGGCAGGAATGCTTTCAGTAATGCAGCAGGAAGCTGGTGAGTGGTTTTTGTTTTGCCCGTGCGATACGCCTTACATTCCCCCTGATTTAGCAGCCAGGCTTAATCATCAGCGCAAAGATGCGCCTGTCGTGTGGGTCCATGACGGTGAACGCGATCACCCGACTATTGCTCTGGTAAACCGCGCTATTGAGCCTTTATTACTGGAATATCTGCAAGCAGGAGAACGCCGGGTAATGGTATTTATGCGTCTGGCTGGCGGTCATGCGGTTGATTTCAGCGATCATAAAGATGCATTTGTTAACGTGAATACGCCAGAGGAGCTTGCCCGATGGCAGGAAAAACGATGA", - "dna_sequence_length": 585, - "functions": [ - "molybdopterin-guanine dinucleotide synthase" - ], - "id": "CDS_3786", - "location": [ - [ - "NC_000913", - 4041999, - "-", - 585 - ] - ], - "md5": "cef3fe7bffae80da8bfff6c149d8c16e", - "parent_gene": "", - "protein_md5": "3e954503a010f3f318a4e4d35b716fb5", - "protein_translation": "MNLMTTITGVVLAGGKARRMGGVDKGLLELNGKPLWQHVADALMTQLSHVVVNANRHQEIYQASGLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQRKDAPVVWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMVFMRLAGGHAVDFSDHKDAFVNVNTPEELARWQEKR", - "protein_translation_length": 194, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418295.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADP9" - ], - [ - "gene_synonym", - "yihD" - ], - [ - "gene_synonym", - "GeneID:948348" - ], - [ - "gene_synonym", - "ECK3850" - ], - [ - "gene_synonym", - "JW3830" - ], - [ - "gene_synonym", - "EcoGene:EG11830" - ], - [ - "gene_synonym", - "ASAP:ABE-0012599" - ], - [ - "gene_synonym", - "b3858" - ], - [ - "gene_synonym", - "GI:16131699" - ] - ], - "dna_sequence": "ATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGATTTGACGGATGACATTCTGATCTATCACCTGAAAATGCGTGATTCCGCGAAAGATGCGGTGATCCCGGGTTTGCAGAAAGATTATGAAGAAGACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAA", - "dna_sequence_length": 270, - "functions": [ - "DUF1040 protein YihD" - ], - "id": "CDS_3787", - "location": [ - [ - "NC_000913", - 4042069, - "+", - 270 - ] - ], - "md5": "a65b05222b7d2a44126ce3721c3bc302", - "parent_gene": "", - "protein_md5": "45589e0d6140d039b9ea5e4c18478b35", - "protein_translation": "MKCKRLNEVIELLQPAWQKEPDLNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE", - "protein_translation_length": 89, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131700" - ], - [ - "gene_synonym", - "GeneID:948346" - ], - [ - "gene_synonym", - "EcoGene:EG11831" - ], - [ - "gene_synonym", - "yihE" - ], - [ - "gene_synonym", - "rdoA" - ], - [ - "gene_synonym", - "ECK3851" - ], - [ - "gene_synonym", - "NP_418296.1" - ], - [ - "gene_synonym", - "orfA" - ], - [ - "gene_synonym", - "JW3831" - ], - [ - "gene_synonym", - "srkA" - ], - [ - "gene_synonym", - "b3859" - ], - [ - "gene_synonym", - "ASAP:ABE-0012604" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C0K3" - ] - ], - "dna_sequence": "ATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGGACGCTCTGTTTGAGCATGGGATCCGGGTGGATTCCGGTCTTACCCCGCTTAACAGCTATGAAAACCGTGTCTATCAATTTCAGGACGAAGATCGTCGACGTTTTGTCGTCAAATTTTATCGCCCTGAACGTTGGACAGCCGATCAAATCCTCGAAGAACATCAATTTGCGTTGCAGCTGGTAAATGATGAAGTTCCGGTCGCAGCACCTGTGGCCTTTAACGGTCAGACTTTATTGAATCATCAGGGATTTTATTTCGCTGTTTTTCCAAGCGTCGGTGGTCGCCAGTTCGAAGCTGATAATATCGATCAGATGGAAGCGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCCGGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGATCCCGCGTTCCCGAAAAATTTCCCGTGGTTAACCGGGGAAGATTACTGGCTGCGACAGACGGCGACTTTTATAGAACAGGCAAAAGTTCTACAAGAACCCCCTTTGCAATTAACACCTATGTATTAA", - "dna_sequence_length": 987, - "functions": [ - "Cpx stress response Thr/Ser protein kinase", - "MazF antagonist protein" - ], - "id": "CDS_3788", - "location": [ - [ - "NC_000913", - 4042415, - "+", - 987 - ] - ], - "md5": "3f94437e31baae93d18cd4510a2245f1", - "parent_gene": "", - "protein_md5": "c807cf16dda9db235ed6b13ca07b8e45", - "protein_translation": "MNNSAFTFQTLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRDGPMFVDLDDARNGPAVQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEPPLQLTPMY", - "protein_translation_length": 328, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131701" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEG4" - ], - [ - "gene_synonym", - "iarA" - ], - [ - "gene_synonym", - "ECK3852" - ], - [ - "gene_synonym", - "JW3832" - ], - [ - "gene_synonym", - "dsf" - ], - [ - "gene_synonym", - "NP_418297.1" - ], - [ - "gene_synonym", - "ppfA" - ], - [ - "gene_synonym", - "dsbA" - ], - [ - "gene_synonym", - "GeneID:948353" - ], - [ - "gene_synonym", - "b3860" - ], - [ - "gene_synonym", - "EcoGene:EG11297" - ], - [ - "gene_synonym", - "ASAP:ABE-0012606" - ] - ], - "dna_sequence": "ATGAAAAAGATTTGGCTGGCGCTGGCTGGTTTAGTTTTAGCGTTTAGCGCATCGGCGGCGCAGTATGAAGATGGTAAACAGTACACTACCCTGGAAAAACCGGTAGCTGGCGCGCCGCAAGTGCTGGAGTTTTTCTCTTTCTTCTGCCCGCACTGCTATCAGTTTGAAGAAGTTCTGCATATTTCTGATAATGTGAAGAAAAAACTGCCGGAAGGCGTGAAGATGACTAAATACCACGTCAACTTCATGGGTGGTGACCTGGGCAAAGATCTGACTCAGGCATGGGCTGTGGCGATGGCGCTGGGCGTGGAAGACAAAGTGACTGTTCCGCTGTTTGAAGGCGTACAGAAAACCCAGACCATTCGTTCTGCTTCTGATATCCGCGATGTATTTATCAACGCAGGTATTAAAGGTGAAGAGTACGACGCGGCGTGGAACAGCTTCGTGGTGAAATCTCTGGTCGCTCAGCAGGAAAAAGCTGCAGCTGACGTGCAATTGCGTGGCGTTCCGGCGATGTTTGTTAACGGTAAATATCAGCTGAATCCGCAGGGTATGGATACCAGCAATATGGATGTTTTTGTTCAGCAGTATGCTGATACAGTGAAATATCTGTCCGAGAAAAAATAA", - "dna_sequence_length": 627, - "functions": [ - "periplasmic protein disulfide isomerase I" - ], - "id": "CDS_3789", - "location": [ - [ - "NC_000913", - 4043418, - "+", - 627 - ] - ], - "md5": "8e71577eec7df8fad7fdf3128c5b5d1f", - "parent_gene": "", - "protein_md5": "448e34c14fd2dd95f0789642f7347452", - "protein_translation": "MKKIWLALAGLVLAFSASAAQYEDGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALGVEDKVTVPLFEGVQKTQTIRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKAAADVQLRGVPAMFVNGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEKK", - "protein_translation_length": 208, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11832" - ], - [ - "gene_synonym", - "GI:90111655" - ], - [ - "gene_synonym", - "yihF" - ], - [ - "gene_synonym", - "JW5574" - ], - [ - "gene_synonym", - "ECK3853" - ], - [ - "gene_synonym", - "ASAP:ABE-0012609" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32128" - ], - [ - "gene_synonym", - "NP_418298.4" - ], - [ - "gene_synonym", - "b3861" - ], - [ - "gene_synonym", - "GeneID:948352" - ] - ], - "dna_sequence": "ATGATACGTAAGTCAGCTACAGGTGTTATTGTTGCGTTAGCCGTAATCTGGGGTGGTGGCACATGGTACACAGGTACGCAAATTCAGCCTGGTGTCGAAAAATTTATTAAAGATTTTAACGATGCTAAAAAGAAAGGTGAACATGCCTACGATATGACGTTAAGTTATCAAAATTTTGACAAAGGCTTTTTTAATTCCCGTTTTCAAATGCAAATGACATTCGATAACGGTGCACCCGATCTCAATATCAAGCCAGGCCAGAAAGTTGTATTTGATGTGGATGTTGAGCACGGTCCGTTGCCCATCACAATGTTAATGCATGGTAATGTCATCCCAGCACTGGCAGCGGCAAAAGTGAACTTAGTGAATAATGAACTGACACAACCGCTATTTATCGCCGCGAAAAATAAATCGCCCGTGGAAGCGACATTGCGATTCGCGTTTGGTGGCTCATTCTCTACGACATTAGATGTTGCCCCTGCAGAGTATGGAAAGTTTTCTTTTGGTGAGGGCCAGTTTACTTTTAATGGTGATGGTAGTTCATTGTCTAACCTGGATATTGAAGGCAAAGTCGAAGATATTGTTCTGCAATTATCACCAATGAACAAAGTAACGGCAAAAAGTTTTACCATTGATTCTCTGGCGCGATTAGAAGAAAAGAAATTTCCGGTTGGTGAAAGCGAGTCGAAATTTAATCAGATTAACATTATCAATCACGGGGAAGACGTTGCCCAAATCGATGCTTTCGTTGCAAAAACCAGGCTGGATCGCGTTAAAGACAAAGATTATATCAATGTCAATCTCACCTACGAACTTGATAAGTTAACAAAAGGGAATCAGCAACTCGGTAGTGGTGAGTGGTCATTGATTGCTGAATCTATTGATCCCTCAGCAGTGCGCCAATTTATCATCCAGTATAACATTGCGATGCAGAAGCAGCTTGCTGCACACCCTGAGTTAGCAAACGATGAAGTTGCTCTGCAAGAAGTGAATGCTGCATTGTTCAAAGAGTATTTACCGTTATTACAAAAAAGTGAGCCGACCATTAAACAACCGGTAAGATGGAAGAACGCACTCGGCGAACTAAATGCCAATCTGGATATCAGTATTGCCGACCCAGCCAAATCTTCATCATCCACAAACAAAGATATCAAATCGCTCAATTTTGATGTGAAGTTACCGCTTAATGTCGTCACAGAAACCGCAAAACAGCTTAATTTATCTGAAGGAATGGATGCGGAAAAAGCGCAAAAGCAGGCTGATAAACAAATCAGCGGGATGATGACATTAGGTCAGATGTTTCAGTTAATCACGATTGACAACAATACCGCCTCGCTGCAGCTGCGTTATACACCGGGTAAAGTTGTTTTTAACGGACAGGAGATGAGCGAAGAAGAATTTATGTCTCGTGCCGGACGTTTTGTTCATTAA", 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"gene_synonym", - "JW3834" - ], - [ - "gene_synonym", - "NP_418299.1" - ], - [ - "gene_synonym", - "EcoGene:EG11833" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32129" - ], - [ - "gene_synonym", - "ASAP:ABE-0012611" - ], - [ - "gene_synonym", - "GeneID:948350" - ], - [ - "gene_synonym", - "b3862" - ] - ], - "dna_sequence": "ATGGCTAACCTTTTGAATAAATTCATTATGACGAGAATACTCGCTGCGATAACCCTTTTGCTGAGTATCGTATTGACCATTTTGGTCACTATTTTTTGTTCCGTCCCGATCATCATTGCCGGGATTGTAAAACTATTGCTACCTGTGCCAGTCATTTGGCGAAAGGTTTCGCGTTTTTGTGATTTTATGATGTATTGCTGGTGTGAAGGTCTGGCGGTATTACTGCATCTGAACCCACACCTTCAATGGGAAGTTCACGGGCTGGAAGGGTTAAGTAAGAAGAACTGGTATCTGCTTATTTGTAACCACCGTAGTTGGGCAGATATTGTCGTACTGTGCGTGCTGTTTCGTAAGCACATTCCGATGAATAAATATTTCCTCAAGCAACAGCTGGCCTGGGTGCCATTTCTTGGCCTGGCGTGCTGGTCGCTGGATATGCCGTTTATGAAGCGTTATTCCCGCGCTTATTTATTACGTCATCCGGAGCGACGTGGTAAAGATGTTGAAACCACTCGGCGTTCTTGTGAAAAGTTTCGCCTGCATCCCACCACCATTGTCAATTTCGTTGAAGGCTCCCGTTTCACGCAAGAAAAACATCAGCAAACCCACTCCACTTTTCAAAACTTGTTGCCACCAAAGGCGGCAGGCATTGCGATGGCGCTAAATGTACTGGGTAAACAATTCGATAAACTGCTTAATGTTACGCTGTGTTATCCGGACAATAACCGTCAGCCGTTCTTCGATATGTTAAGCGGTAAACTGACGCGGATTGTCGTACATGTGGATTTACAGCCTATTGCCGATGAGTTACATGGCGACTACATCAATGACAAAAGCTTTAAGCGCCATTTTCAGCAATGGCTGAACTCATTGTGGCAGGAAAAAGACCGGCTTCTGACGTCTCTCATGTCATCACAGCGTCAGAATAAGTAA", - "dna_sequence_length": 933, - "functions": [ - "inner membrane protein, inner membrane acyltransferase" - ], - "id": "CDS_3791", - "location": [ - [ - "NC_000913", - 4046602, - "-", - 933 - ] - ], - "md5": "286eaa1439646be5567ba85e96f395dc", - "parent_gene": "", - "protein_md5": "2e6af8067c3570f99be06c87394bbcd2", - "protein_translation": "MANLLNKFIMTRILAAITLLLSIVLTILVTIFCSVPIIIAGIVKLLLPVPVIWRKVSRFCDFMMYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICNHRSWADIVVLCVLFRKHIPMNKYFLKQQLAWVPFLGLACWSLDMPFMKRYSRAYLLRHPERRGKDVETTRRSCEKFRLHPTTIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIAMALNVLGKQFDKLLNVTLCYPDNNRQPFFDMLSGKLTRIVVHVDLQPIADELHGDYINDKSFKRHFQQWLNSLWQEKDRLLTSLMSSQRQNK", - "protein_translation_length": 310, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3855" - ], - [ - "gene_synonym", - "GI:16131704" - ], - [ - "gene_synonym", - "JW3835" - ], - [ - "gene_synonym", - "NP_418300.1" - ], - [ - "gene_synonym", - "EcoGene:EG10746" - ], - [ - "gene_synonym", - "polA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00582" - ], - [ - "gene_synonym", - "resA" - ], - [ - "gene_synonym", - "GeneID:948356" - ], - [ - "gene_synonym", - "ASAP:ABE-0012618" - ], - [ - "gene_synonym", - "b3863" - ] - ], - "dna_sequence": "ATGGTTCAGATCCCCCAAAATCCACTTATCCTTGTAGATGGTTCATCTTATCTTTATCGCGCATATCACGCGTTTCCCCCGCTGACTAACAGCGCAGGCGAGCCGACCGGTGCGATGTATGGTGTCCTCAACATGCTGCGCAGTCTGATCATGCAATATAAACCGACGCATGCAGCGGTGGTCTTTGACGCCAAGGGAAAAACCTTTCGTGATGAACTGTTTGAACATTACAAATCACATCGCCCGCCAATGCCGGACGATCTGCGTGCACAAATCGAACCCTTGCACGCGATGGTTAAAGCGATGGGACTGCCGCTGCTGGCGGTTTCTGGCGTAGAAGCGGACGACGTTATCGGTACTCTGGCGCGCGAAGCCGAAAAAGCCGGGCGTCCGGTGCTGATCAGCACTGGCGATAAAGATATGGCGCAGCTGGTGACGCCAAATATTACGCTTATCAATACCATGACGAATACCATCCTCGGACCGGAAGAGGTGGTGAATAAGTACGGCGTGCCGCCAGAACTGATCATCGATTTCCTGGCGCTGATGGGTGACTCCTCTGATAACATTCCTGGCGTACCGGGCGTCGGTGAAAAAACCGCGCAGGCATTGCTGCAAGGTCTTGGCGGACTGGATACGCTGTATGCCGAGCCAGAAAAAATTGCTGGGTTGAGCTTCCGTGGCGCGAAAACAATGGCAGCGAAGCTCGAGCAAAACAAAGAAGTTGCTTATCTCTCATACCAGCTGGCGACGATTAAAACCGACGTTGAACTGGAGCTGACCTGTGAACAACTGGAAGTGCAGCAACCGGCAGCGGAAGAGTTGTTGGGGCTGTTCAAAAAGTATGAGTTCAAACGCTGGACTGCTGATGTCGAAGCGGGCAAATGGTTACAGGCCAAAGGGGCAAAACCAGCCGCGAAGCCACAGGAAACCAGTGTTGCAGACGAAGCACCAGAAGTGACGGCAACGGTGATTTCTTATGACAACTACGTCACCATCCTTGATGAAGAAACACTGAAAGCGTGGATTGCGAAGCTGGAAAAAGCGCCGGTATTTGCATTTGATACCGAAACCGACAGCCTTGATAACATCTCTGCTAACCTGGTCGGGCTTTCTTTTGCTATCGAGCCAGGCGTAGCGGCATATATTCCGGTTGCTCATGATTATCTTGATGCGCCCGATCAAATCTCTCGCGAGCGTGCACTCGAGTTGCTAAAACCGCTGCTGGAAGATGAAAAGGCGCTGAAGGTCGGGCAAAACCTGAAATACGATCGCGGTATTCTGGCGAACTACGGCATTGAACTGCGTGGGATTGCGTTTGATACCATGCTGGAGTCCTACATTCTCAATAGCGTTGCCGGGCGTCACGATATGGACAGCCTCGCGGAACGTTGGTTGAAGCACAAAACCATCACTTTTGAAGAGATTGCTGGTAAAGGCAAAAATCAACTGACCTTTAACCAGATTGCCCTCGAAGAAGCCGGACGTTACGCCGCCGAAGATGCAGATGTCACCTTGCAGTTGCATCTGAAAATGTGGCCGGATCTGCAAAAACACAAAGGGCCGTTGAACGTCTTCGAGAATATCGAAATGCCGCTGGTGCCGGTGCTTTCACGCATTGAACGTAACGGTGTGAAGATCGATCCGAAAGTGCTGCACAATCATTCTGAAGAGCTCACCCTTCGTCTGGCTGAGCTGGAAAAGAAAGCGCATGAAATTGCAGGTGAGGAATTTAACCTTTCTTCCACCAAGCAGTTACAAACCATTCTCTTTGAAAAACAGGGCATTAAACCGCTGAAGAAAACGCCGGGTGGCGCGCCGTCAACGTCGGAAGAGGTACTGGAAGAACTGGCGCTGGACTATCCGTTGCCAAAAGTGATTCTGGAGTATCGTGGTCTGGCGAAGCTGAAATCGACCTACACCGACAAGCTGCCGCTGATGATCAACCCGAAAACCGGGCGTGTGCATACCTCTTATCACCAGGCAGTAACTGCAACGGGACGTTTATCGTCAACCGATCCTAACCTGCAAAACATTCCGGTGCGTAACGAAGAAGGTCGTCGTATCCGCCAGGCGTTTATTGCGCCAGAGGATTATGTGATTGTCTCAGCGGACTACTCGCAGATTGAACTGCGCATTATGGCGCATCTTTCGCGTGACAAAGGCTTGCTGACCGCATTCGCGGAAGGAAAAGATATCCACCGGGCAACGGCGGCAGAAGTGTTTGGTTTGCCACTGGAAACCGTCACCAGCGAGCAACGCCGTAGCGCGAAAGCGATCAACTTTGGTCTGATTTATGGCATGAGTGCTTTCGGTCTGGCGCGGCAATTGAACATTCCACGTAAAGAAGCGCAGAAGTACATGGACCTTTACTTCGAACGCTACCCTGGCGTGCTGGAGTATATGGAACGCACCCGTGCTCAGGCGAAAGAGCAGGGCTACGTTGAAACGCTGGACGGACGCCGTCTGTATCTGCCGGATATCAAATCCAGCAATGGTGCTCGTCGTGCAGCGGCTGAACGTGCAGCCATTAACGCGCCAATGCAGGGAACCGCCGCCGACATTATCAAACGGGCGATGATTGCCGTTGATGCGTGGTTACAGGCTGAGCAACCGCGTGTACGTATGATCATGCAGGTACACGATGAACTGGTATTTGAAGTTCATAAAGATGATGTTGATGCCGTCGCGAAGCAGATTCATCAACTGATGGAAAACTGTACCCGTCTGGATGTGCCGTTGCTGGTGGAAGTGGGGAGTGGCGAAAACTGGGATCAGGCGCACTAA", 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"MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH", - "protein_translation_length": 928, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11203" - ], - [ - "gene_synonym", - "JW5930" - ], - [ - "gene_synonym", - "ECK3857" - ], - [ - "gene_synonym", - "engB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6P7" - ], - [ - "gene_synonym", - "NP_418301.3" - ], - [ - "gene_synonym", - "yihA" - ], - [ - "gene_synonym", - "ASAP:ABE-0012623" - ], - [ - "gene_synonym", - "GeneID:948358" - ], - [ - "gene_synonym", - "GI:145698334" - ], - [ - "gene_synonym", - "b3865" - ] - ], - "dna_sequence": "TTGACTAATTTGAATTATCAACAGACGCATTTTGTGATGAGTGCGCCTGATATTCGCCACCTACCTTCCGATACCGGAATTGAAGTGGCTTTTGCAGGCCGTTCCAACGCAGGTAAATCCAGCGCGCTGAACACGCTGACTAACCAGAAAAGCCTGGCTCGTACCTCAAAAACCCCAGGGCGCACCCAGCTTATCAACCTGTTTGAAGTGGCTGACGGCAAGCGTCTGGTTGACTTGCCTGGGTACGGTTATGCGGAAGTCCCGGAAGAGATGAAGCGCAAATGGCAGCGTGCGCTCGGCGAATACCTCGAAAAACGTCAGAGCCTGCAAGGTCTGGTGGTGCTAATGGATATTCGCCATCCGCTGAAAGATTTGGATCAGCAGATGATTGAGTGGGCGGTAGACAGCAATATCGCCGTTCTGGTGCTGCTGACCAAAGCGGACAAACTGGCAAGCGGCGCACGTAAAGCGCAATTGAATATGGTGCGTGAAGCTGTACTGGCGTTTAACGGTGATGTGCAGGTTGAAACGTTTTCTTCGTTGAAGAAACAAGGCGTGGACAAGCTGCGGCAGAAACTGGATACCTGGTTTAGCGAGATGCAGCCTGTAGAAGAAACGCAGGACGGCGAATAA", - "dna_sequence_length": 633, - "functions": [ - "cell division GTP-binding protein" - ], - "id": "CDS_3793", - "location": [ - [ - "NC_000913", - 4050765, - "-", - 633 - ] - ], - "md5": "06977426b7c41c31d5148e2431e88edf", - "parent_gene": "", - "protein_md5": "16598aaf584fa79e607258db285c63b6", - "protein_translation": "MTNLNYQQTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQPVEETQDGE", - "protein_translation_length": 210, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948363" - ], - [ - "gene_synonym", - "GI:16131706" - ], - [ - "gene_synonym", - "ECK3859" - ], - [ - "gene_synonym", - "JW3837" - ], - [ - "gene_synonym", - "yihI" - ], - [ - "gene_synonym", - "ASAP:ABE-0012626" - ], - [ - "gene_synonym", - "EcoGene:EG11835" - ], - [ - "gene_synonym", - "NP_418302.1" - ], - [ - "gene_synonym", - "b3866" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8H6" - ] - ], - "dna_sequence": "ATGAAACCATCATCTTCAAACTCACGCAGCAAAGGTCATGCAAAAGCGCGTCGAAAAACACGCGAGGAGCTGGATCAGGAAGCTCGTGATCGCAAGCGTCAGAAAAAACGTCGTGGTCATGCGCCGGGCAGCCGCGCAGCGGGCGGAAACACCACGTCAGGCAGCAAAGGCCAGAACGCACCAAAAGATCCACGTATTGGCAGTAAAACCCCTATTCCATTGGGCGTGACTGAAAAAGTCACCAAACAGCACAAACCGAAGAGTGAGAAACCTATGCTTTCACCGCAGGCGGAGTTGGAATTACTGGAAACGGATGAGCGTCTGGATGCGCTGCTGGAACGTCTGGAAGCAGGCGAAACCCTGAGTGCCGAAGAGCAATCCTGGGTGGATGCTAAACTGGATCGTATTGATGAGTTGATGCAGAAACTCGGCCTCTCTTATGACGATGACGAAGAAGAGGAAGAAGACGAGAAGCAAGAAGACATGATGCGTCTGCTGCGGGGCAACTAA", - "dna_sequence_length": 510, - "functions": [ - "activator of Der GTPase" - ], - "id": "CDS_3794", - "location": [ - [ - "NC_000913", - 4051347, - "+", - 510 - ] - ], - "md5": "df888de0e7f4caa2e863d3f2fbb1e35b", - "parent_gene": "", - "protein_md5": "d6d01f403ba2cc3896163106ecc766cc", - "protein_translation": "MKPSSSNSRSKGHAKARRKTREELDQEARDRKRQKKRRGHAPGSRAAGGNTTSGSKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELLETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQEDMMRLLRGN", - "protein_translation_length": 169, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948362" - ], - [ - "gene_synonym", - "yihJ" - ], - [ - "gene_synonym", - "GI:90111657" - ], - [ - "gene_synonym", - "JW3838" - ], - [ - "gene_synonym", - "ECK3860" - ], - [ - "gene_synonym", - "EcoGene:EG11836" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32131" - ], - [ - "gene_synonym", - "hemN" - ], - [ - "gene_synonym", - "ASAP:ABE-0012629" - ], - [ - "gene_synonym", - "b3867" - ], - [ - "gene_synonym", - "NP_418303.2" - ] - ], - "dna_sequence": "ATGTCTGTACAGCAAATCGACTGGGATCTGGCCCTGATCCAGAAATATAACTATTCCGGGCCACGATACACCTCGTACCCGACCGCGCTGGAGTTTTCAGAAGACTTCGGCGAACAGGCGTTTTTACAAGCCGTGGCGCGCTATCCTGAGCGTCCATTATCTCTCTACGTACATATCCCGTTCTGCCATAAGCTTTGTTACTTCTGCGGTTGCAATAAGATTGTTACTCGCCAGCAGCACAAGGCCGATCAGTATCTGGACGCGCTGGAGCAAGAAATCGTCCATCGTGCACCGCTGTTCGCCGGGCGTCACGTCAGCCAATTGCACTGGGGCGGCGGAACGCCGACGTATCTGAATAAAGCGCAAATCAGCCGCCTGATGAAGCTGCTGCGCGAAAACTTCCAGTTCAATGCCGATGCGGAGATTTCGATCGAAGTCGATCCGCGGGAAATCGAACTGGATGTACTCGATCATTTACGCGCCGAAGGCTTTAATCGCCTGAGCATGGGCGTGCAGGACTTCAACAAAGAAGTGCAACGTCTGGTTAACCGCGAGCAGGATGAAGAGTTCATCTTTGCACTGCTTAACCATGCGCGTGAGATTGGTTTTACCTCCACCAACATCGACCTGATTTACGGCCTGCCGAAACAGACGCCGGAGAGTTTCGCCTTTACCCTGAAACGTGTGGCGGAGCTGAACCCCGATCGTCTGAGTGTCTTTAACTACGCGCATCTGCCGACCATTTTTGCTGCTCAGCGCAAAATCAAAGATGCTGACCTGCCGAGTCCGCAGCAAAAACTCGATATCCTGCAGGAAACCATCGCCTTCCTGACGCAATCGGGCTATCAGTTTATCGGTATGGATCACTTTGCCCGTCCGGATGACGAGCTGGCGGTGGCCCAGCGTGAAGGCGTGCTGCATCGTAACTTCCAGGGCTACACCACTCAGGGCGATACCGATCTGCTGGGGATGGGCGTTTCCGCCATCAGCATGATTGGCGACTGCTACGCGCAGAACCAGAAAGAGTTGAAGCAGTACTATCAGCAAGTGGATGAACAAGGCAATGCGCTGTGGCGTGGTATTGCGCTAACGCGTGATGACTGTATTCGCCGCGATGTGATTAAGTCGCTCATCTGCAACTTCCGTCTGGATTACGCCCCTATTGAGAAACAGTGGGATTTGCACTTCGCTGATTACTTTGCGGAAGATCTCAAGCTGCTCGCCCCGTTAGCAAAAGATGGGCTGGTGGATGTGGATGAGAAGGGAATACAGGTGACGGCGAAAGGTCGCTTGCTGATCCGCAACATTTGCATGTGCTTTGATACCTATCTGCGCCAGAAAGCGCGGATGCAGCAGTTCTCTCGGGTGATTTAA", - "dna_sequence_length": 1374, - "functions": [ - "coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent" - ], - "id": "CDS_3795", - "location": [ - [ - "NC_000913", - 4052045, - "+", - 1374 - ] - ], - "md5": "c316f6ca3718a3f2150ee33066b5576d", - "parent_gene": "", - "protein_md5": "740de0cf66dad4cc29af44f7df31b4ef", - "protein_translation": "MSVQQIDWDLALIQKYNYSGPRYTSYPTALEFSEDFGEQAFLQAVARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYAQNQKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQWDLHFADYFAEDLKLLAPLAKDGLVDVDEKGIQVTAKGRLLIRNICMCFDTYLRQKARMQQFSRVI", - "protein_translation_length": 457, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P620" - ], - [ - "gene_synonym", - "yshB" - ], - [ - "gene_synonym", - "GeneID:7751621" - ], - [ - "gene_synonym", - "ECK4501" - ], - [ - "gene_synonym", - "EcoGene:EG14491" - ], - [ - "gene_synonym", - "GI:226524761" - ], - [ - "gene_synonym", - "YP_002791260.1" - ], - [ - "gene_synonym", - "b4686" - ] - ], - "dna_sequence": "ATGCTGGAATCAATAATTAATCTGGTATCGAGTGGCGCAGTTGACAGCCACACACCGCAAACTGCCGTTGCTGCCGTGCTGTGTGCCGCAATGATTGGGCTGTTTAGCTGA", - "dna_sequence_length": 111, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_3796", - "location": [ - [ - "NC_000913", - 4053757, - "-", - 111 - ] - ], - "md5": "795c8d77fef667c979e18443a71fbecf", - "parent_gene": "", - "protein_md5": "d1bb35837393037c15140abb2b2e8095", - "protein_translation": "MLESIINLVSSGAVDSHTPQTAVAAVLCAAMIGLFS", - "protein_translation_length": 36, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948361" - ], - [ - "gene_synonym", - "ECK3861" - ], - [ - "gene_synonym", - "JW3839" - ], - [ - "gene_synonym", - "GI:16131708" - ], - [ - "gene_synonym", - "glnG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFB8" - ], - [ - "gene_synonym", - "NP_418304.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012632" - ], - [ - "gene_synonym", - "b3868" - ], - [ - "gene_synonym", - "glnT" - ], - [ - "gene_synonym", - "EcoGene:EG10385" - ], - [ - "gene_synonym", - "ntrC" - ] - ], - "dna_sequence": "ATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTTGGGTGCTTGAACGTGCGCTCGCTGGGGCAGGTTTAACCTGTACGACGTTTGAGAACGGCGCAGAAGTGCTGGAGGCGCTGGCGAGCAAAACGCCGGATGTGCTGCTTTCAGATATCCGTATGCCGGGAATGGACGGGCTGGCGCTGCTCAAGCAGATTAAACAGCGCCATCCAATGCTTCCGGTCATCATTATGACCGCACATTCCGATCTGGATGCTGCCGTCAGCGCCTATCAACAAGGGGCGTTTGATTATCTGCCCAAACCGTTTGATATCGACGAAGCAGTGGCGCTGGTTGAGCGCGCTATCAGTCATTACCAGGAACAGCAGCAGCCGCGTAATGTTCAGCTTAACGGCCCAACGACCGATATCATCGGCGAAGCGCCAGCCATGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTGCTGATTAACGGCGAATCCGGCACCGGTAAAGAACTGGTCGCTCATGCCCTGCATCGCCACAGTCCGCGCGCCAAAGCGCCGTTTATCGCGCTGAATATGGCAGCTATCCCAAAAGATTTGATCGAATCAGAACTGTTTGGCCACGAGAAAGGCGCGTTTACTGGCGCGAATACCATTCGTCAGGGGCGTTTTGAACAGGCCGATGGCGGTACATTATTCCTCGACGAAATTGGTGATATGCCGCTGGATGTGCAGACGCGTTTGCTGCGCGTGCTGGCAGACGGTCAGTTTTACCGCGTTGGCGGCTATGCGCCGGTGAAAGTGGATGTGCGGATTATCGCTGCCACTCACCAGAATCTCGAACAGCGAGTGCAGGAAGGTAAGTTCCGTGAGGATCTGTTCCACCGCCTGAACGTTATCCGCGTTCATCTGCCGCCGCTGCGCGAACGTCGGGAAGATATTCCCCGTCTGGCGCGCCATTTTTTACAGGTTGCCGCGCGCGAACTGGGCGTAGAAGCGAAGTTACTGCATCCGGAAACCGAAGCTGCTCTGACGCGTCTGGCGTGGCCAGGCAACGTGCGCCAGCTGGAAAACACCTGCCGCTGGCTAACGGTGATGGCCGCCGGGCAGGAAGTGTTGATTCAGGATTTGCCCGGCGAACTGTTTGAATCAACGGTTGCGGAGAGTACTTCGCAAATGCAACCGGACAGCTGGGCGACGCTTCTTGCGCAGTGGGCAGACAGAGCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGCCAGAGCTGGAGCGGACGTTACTGACGACCGCGTTGCGACATACGCAGGGGCATAAACAGGAAGCGGCGCGGCTACTCGGCTGGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGATGGAGTGA", - "dna_sequence_length": 1410, - "functions": [ - "fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein" - ], - "id": "CDS_3797", - "location": [ - [ - "NC_000913", - 4055278, - "-", - 1410 - ] - ], - "md5": "e7350d491cc64b2e614c60805d009fde", - "parent_gene": "", - "protein_md5": "2e4923d18ec24bccc33a37b0a1ac41dd", - "protein_translation": "MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME", - "protein_translation_length": 469, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418305.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFB5" - ], - [ - "gene_synonym", - "ECK3862" - ], - [ - "gene_synonym", - "glnL" - ], - [ - "gene_synonym", - "GI:16131709" - ], - [ - "gene_synonym", - "JW3840" - ], - [ - "gene_synonym", - "ASAP:ABE-0012634" - ], - [ - "gene_synonym", - "b3869" - ], - [ - "gene_synonym", - "glnR" - ], - [ - "gene_synonym", - "EcoGene:EG10387" - ], - [ - "gene_synonym", - "ntrB" - ], - [ - "gene_synonym", - "GeneID:948360" - ] - ], - "dna_sequence": "ATGGCAACAGGCACGCAGCCCGATGCTGGGCAGATCCTCAACTCGCTGATTAACAGTATTTTGTTAATCGATGACAACCTGGCGATCCATTACGCCAACCCTGCCGCGCAACAACTGCTCGCCCAAAGCTCCCGCAAATTGTTTGGTACACCGTTACCGGAACTGTTGAGCTACTTCTCATTAAATATCGAGCTGATGCAAGAAAGTCTGGAGGCGGGGCAAGGTTTTACCGATAACGAAGTGACGCTGGTCATCGACGGGCGCTCGCATATCCTTTCTGTGACGGCCCAGCGTATGCCGGACGGCATGATCCTGCTGGAGATGGCTCCGATGGATAACCAGCGCCGCTTAAGTCAGGAACAGCTACAGCACGCCCAGCAGGTTGCTGCCCGTGATTTAGTGCGCGGCCTGGCACATGAGATTAAAAATCCGCTTGGCGGTTTACGTGGCGCGGCGCAGCTGCTCAGCAAAGCGTTACCTGACCCATCACTACTCGAATATACCAAAGTGATTATCGAACAGGCGGACCGGCTGCGAAATCTGGTCGACCGTCTGTTGGGGCCGCAGCTGCCCGGTACGCGCGTTACCGAAAGTATTCACAAAGTGGCTGAACGCGTGGTAACGCTGGTGTCGATGGAACTGCCGGACAACGTGCGGTTGATTCGTGATTACGATCCCAGCCTACCGGAACTGGCGCACGACCCGGATCAAATTGAACAGGTCTTGCTGAATATTGTGCGCAATGCGCTACAGGCGCTGGGGCCGGAAGGCGGTGAAATCATTCTGCGTACCCGCACCGCGTTTCAACTGACCTTACACGGCGAGCGCTACCGGCTGGCGGCGCGGATTGATGTGGAAGATAACGGGCCGGGCATTCCGCCTCATTTGCAGGATACGCTGTTTTACCCGATGGTCAGCGGCCGCGAAGGTGGCACCGGGCTTGGCTTATCCATCGCTCGTAATTTGATTGATCAGCATTCAGGCAAAATTGAATTTACCAGTTGGCCAGGGCATACCGAGTTCTCGGTTTACCTGCCTATCAGGAAATAA", - "dna_sequence_length": 1050, - "functions": [ - "sensory histidine kinase in two-component regulatory system with GlnG" - ], - "id": "CDS_3798", - "location": [ - [ - "NC_000913", - 4056339, - "-", - 1050 - ] - ], - "md5": "1fd12531baae3bc0f593c70ac592aa6d", - "parent_gene": "", - "protein_md5": "57bebe9c13da525f9cde187fb901cd5e", - "protein_translation": "MATGTQPDAGQILNSLINSILLIDDNLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFSLNIELMQESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMPDGMILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPSLLEYTKVIIEQADRLRNLVDRLLGPQLPGTRVTESIHKVAERVVTLVSMELPDNVRLIRDYDPSLPELAHDPDQIEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTLFYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLPIRK", - "protein_translation_length": 349, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131710" - ], - [ - "gene_synonym", - "ECK3863" - ], - [ - "gene_synonym", - "ASAP:ABE-0012640" - ], - [ - "gene_synonym", - "GeneID:948370" - ], - [ - "gene_synonym", - "glnA" - ], - [ - "gene_synonym", - "JW3841" - ], - [ - "gene_synonym", - "b3870" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9C5" - ], - [ - "gene_synonym", - "EcoGene:EG10383" - ], - [ - "gene_synonym", - "NP_418306.1" - ] - ], - "dna_sequence": "ATGTCCGCTGAACACGTACTGACGATGCTGAACGAGCACGAAGTGAAGTTTGTTGATTTGCGCTTCACCGATACTAAAGGTAAAGAACAGCACGTCACTATCCCTGCTCATCAGGTGAATGCTGAATTCTTCGAAGAAGGCAAAATGTTTGACGGCTCCTCGATTGGCGGCTGGAAAGGCATTAACGAGTCCGACATGGTGCTGATGCCAGACGCATCCACCGCAGTGATTGACCCGTTCTTCGCCGACTCCACCCTGATTATCCGTTGCGACATCCTTGAACCTGGCACCCTGCAAGGCTATGACCGTGACCCGCGCTCCATTGCGAAGCGCGCCGAAGATTACCTGCGTTCCACTGGCATTGCCGACACCGTACTGTTCGGGCCAGAACCTGAATTCTTCCTGTTCGATGACATCCGTTTCGGATCATCTATCTCCGGTTCCCACGTTGCTATCGACGATATCGAAGGCGCATGGAACTCCTCCACCCAATACGAAGGTGGTAACAAAGGTCACCGTCCGGCAGTGAAAGGCGGTTACTTCCCGGTTCCACCGGTAGACTCGGCTCAGGATATTCGTTCTGAAATGTGTCTGGTGATGGAACAGATGGGTCTGGTGGTTGAAGCCCATCACCACGAAGTAGCGACTGCTGGTCAGAACGAAGTGGCTACCCGCTTCAATACCATGACCAAAAAAGCTGACGAAATTCAGATCTACAAATATGTTGTGCACAACGTAGCGCACCGCTTCGGTAAAACCGCGACCTTTATGCCAAAACCGATGTTCGGTGATAACGGCTCCGGTATGCACTGCCACATGTCTCTGTCTAAAAACGGCGTTAACCTGTTCGCAGGCGACAAATACGCAGGTCTGTCTGAGCAGGCGCTGTACTACATTGGCGGCGTAATCAAACACGCTAAAGCGATTAACGCCCTGGCAAACCCGACCACCAACTCTTATAAGCGTCTGGTCCCGGGCTATGAAGCACCGGTAATGCTGGCTTACTCTGCGCGTAACCGTTCTGCGTCTATCCGTATTCCGGTGGTTTCTTCTCCGAAAGCACGTCGTATCGAAGTACGTTTCCCGGATCCGGCAGCTAACCCGTACCTGTGCTTTGCTGCCCTGCTGATGGCCGGTCTTGATGGTATCAAGAACAAGATCCATCCGGGCGAAGCCATGGACAAAAACCTGTATGACCTGCCGCCAGAAGAAGCGAAAGAGATCCCACAGGTTGCAGGCTCTCTGGAAGAAGCACTGAACGAACTGGATCTGGACCGCGAGTTCCTGAAAGCCGGTGGCGTGTTCACTGACGAAGCAATTGATGCGTACATCGCTCTGCGTCGCGAAGAAGATGACCGCGTGCGTATGACTCCGCATCCGGTAGAGTTTGAGCTGTACTACAGCGTCTAA", - "dna_sequence_length": 1410, - "functions": [ - "glutamine synthetase" - ], - "id": "CDS_3799", - "location": [ - [ - "NC_000913", - 4058034, - "-", - 1410 - ] - ], - "md5": "c478f524c220ae8ef97955ddc3e0e1c8", - "parent_gene": "", - "protein_md5": "db66e6214ba9e9524ecbc161094c8675", - "protein_translation": "MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWKGINESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLRSTGIADTVLFGPEPEFFLFDDIRFGSSISGSHVAIDDIEGAWNSSTQYEGGNKGHRPAVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLSKNGVNLFAGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVSSPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEAMDKNLYDLPPEEAKEIPQVAGSLEEALNELDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYSV", - "protein_translation_length": 469, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3864" - ], - [ - "gene_synonym", - "yihK" - ], - [ - "gene_synonym", - "JW5571" - ], - [ - "gene_synonym", - "GeneID:948369" - ], - [ - "gene_synonym", - "bipA" - ], - [ - "gene_synonym", - "ASAP:ABE-0012648" - ], - [ - "gene_synonym", - "b3871" - ], - [ - "gene_synonym", - "EcoGene:EG11837" - ], - [ - "gene_synonym", - "YP_026274.1" - ], - [ - "gene_synonym", - "typA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32132" - ], - [ - "gene_synonym", - "GI:49176434" - ] - ], - "dna_sequence": "GTGATCGAAAAATTGCGTAATATCGCCATCATCGCGCACGTAGACCATGGTAAAACCACCCTGGTAGACAAGCTGCTCCAACAATCCGGTACGTTCGACTCTCGTGCCGAAACCCAAGAGCGCGTGATGGACTCCAACGATTTGGAGAAAGAGCGTGGGATTACCATCCTCGCGAAAAACACCGCTATCAAATGGAATGATTACCGTATCAACATCGTTGATACCCCGGGGCACGCCGACTTCGGTGGTGAAGTTGAACGTGTAATGTCCATGGTAGACTCAGTGCTGCTGGTGGTTGACGCATTTGACGGCCCGATGCCGCAAACGCGCTTCGTAACCAAAAAAGCGTTTGCTTACGGCCTGAAGCCGATTGTTGTTATCAACAAAGTTGACCGCCCTGGCGCGCGTCCTGATTGGGTTGTGGATCAGGTATTCGATCTGTTCGTTAACCTCGACGCGACCGACGAGCAGCTGGACTTCCCGATCGTTTACGCTTCTGCGCTGAACGGTATCGCGGGTCTGGACCACGAAGATATGGCGGAAGACATGACCCCGCTGTACCAGGCGATTGTTGACCACGTTCCTGCGCCGGACGTTGACCTTGACGGTCCGTTCCAGATGCAGATTTCTCAGCTCGATTACAACAGCTATGTTGGCGTTATCGGCATTGGCCGCATCAAGCGCGGTAAAGTGAAGCCGAACCAGCAGGTCACTATCATCGATAGCGAAGGCAAAACCCGCAACGCGAAAGTCGGTAAAGTGCTGGGCCACCTCGGTCTGGAACGTATCGAAACCGATCTGGCGGAAGCTGGCGATATCGTTGCGATCACGGGCCTTGGCGAACTGAACATTTCTGACACCGTTTGCGACACGCAAAACGTTGAAGCGCTGCCGGCACTCTCCGTTGATGAGCCGACCGTTTCTATGTTCTTCTGCGTTAACACCTCGCCGTTCTGCGGTAAAGAAGGTAAGTTCGTAACGTCTCGTCAGATCCTGGATCGTCTGAACAAAGAACTGGTACACAACGTTGCGCTGCGCGTAGAAGAAACCGAAGACGCCGATGCGTTCCGCGTTTCTGGTCGTGGCGAACTGCACCTGTCTGTTCTGATCGAAAACATGCGTCGTGAAGGTTTCGAACTGGCGGTATCCCGTCCGAAAGTTATCTTCCGTGAAATCGACGGTCGTAAACAAGAGCCGTATGAAAACGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTGATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTCAGCGTCAGAACGGCGTACTGATCTCTAACGGTCAGGGTAAAGCGGTCGCGTTCGCGCTGTTCGGTCTGCAGGATCGCGGTAAGCTGTTCCTCGGTCACGGTGCAGAAGTTTACGAAGGTCAGATTATCGGTATTCATAGCCGCTCTAACGACCTGACTGTAAACTGCCTGACCGGTAAGAAACTGACCAACATGCGTGCTTCCGGTACTGACGAAGCCGTTGTTCTGGTTCCGCCTATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAA", - "dna_sequence_length": 1824, - "functions": [ - "GTP-binding protein" - ], - "id": "CDS_3800", - "location": [ - [ - "NC_000913", - 4058407, - "+", - 1824 - ] - ], - "md5": "aee4f604ff49acd4394a79c839fd26bc", - "parent_gene": "", - "protein_md5": "2807b230fcc1f2c9acd0e0d31cd3fcf3", - "protein_translation": "MIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDSEGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDVRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKLTNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRRANRAPKDD", - "protein_translation_length": 607, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131712" - ], - [ - "gene_synonym", - "yihL" - ], - [ - "gene_synonym", - "ASAP:ABE-0012651" - ], - [ - "gene_synonym", - "JW3843" - ], - [ - "gene_synonym", - "ECK3865" - ], - [ - "gene_synonym", - "GeneID:948368" - ], - [ - "gene_synonym", - "b3872" - ], - [ - "gene_synonym", - "NP_418308.1" - ], - [ - "gene_synonym", - "EcoGene:EG11838" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACM9" - ] - ], - "dna_sequence": "ATGGCGGAGAATCAATCCACCGTAGAAAATGCAAAAGAGAAACTGGATCGGTGGTTGAAAGATGGCATCACCACGCCGGGTGGAAAACTCCCTTCAGAAAGAGAGCTGGGAGAACTGCTGGGCATTAAACGTATGACGCTGCGCCAGGCGTTGTTGAACCTCGAGGCAGAATCCAAAATCTTCCGTAAGGATCGTAAGGGGTGGTTCGTGACCCAGCCGCGATTTAATTACAGTCCGGAGCTGTCGGCGAGCTTTCAGCGGGCCGCAATTGAGCAAGGGCGAGAGCCTTCCTGGGGGTTTACCGAGAAAAACCGTACCAGCGATATTCCCGAGACGCTCGCGCCACTGATTGCAGTGACGCCATCAACTGAACTCTATCGCATCACCGGCTGGGGGGCGCTGGAAGGACATAAAGTTTTCTATCACGAAACATATATTAATCCTGAAGTTGCTCCGGGCTTTATTGAACAACTTGAAAACCACTCATTTTCTGCAGTCTGGGAAAAGTGCTACCAAAAAGAGACGGTAGTAAAAAAATTGATTTTCAAACCCGTCAGAATGCCGGGCGATATCAGCAAGTATCTTGGCGGTTCTGCGGGTATGCCAGCGATCTTAATTGAAAAGCATCGCGCCGACCAGCAAGGCAATATTGTCCAAATAGATATTGAATATTGGCGATTTGAGGCCGTAGACCTCATCATTAATCTGTAG", - "dna_sequence_length": 711, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_3801", - "location": [ - [ - "NC_000913", - 4060447, - "+", - 711 - ] - ], - "md5": "5e90e6c2d1545fd8c809cfbd5bf896d1", - "parent_gene": "", - "protein_md5": "5001e585b1305abd33ffad482938cdf2", - "protein_translation": "MAENQSTVENAKEKLDRWLKDGITTPGGKLPSERELGELLGIKRMTLRQALLNLEAESKIFRKDRKGWFVTQPRFNYSPELSASFQRAAIEQGREPSWGFTEKNRTSDIPETLAPLIAVTPSTELYRITGWGALEGHKVFYHETYINPEVAPGFIEQLENHSFSAVWEKCYQKETVVKKLIFKPVRMPGDISKYLGGSAGMPAILIEKHRADQQGNIVQIDIEYWRFEAVDLIINL", - "protein_translation_length": 236, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131713" - ], - [ - "gene_synonym", - "ECK3866" - ], - [ - "gene_synonym", - "GeneID:948367" - ], - [ - "gene_synonym", - "yihM" - ], - [ - "gene_synonym", - "ASAP:ABE-0012653" - ], - [ - "gene_synonym", - "JW3844" - ], - [ - "gene_synonym", - "b3873" - ], - [ - "gene_synonym", - "NP_418309.1" - ], - [ - "gene_synonym", - "EcoGene:EG11839" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32134" - ] - ], - "dna_sequence": "ATGGTGACAATAAATAACGCAAGAAAGATTCTACAACGTGTCGACACTCTTCCTCTTTATTTACATGCTTATGCCTTTCATTTAAATATGCGGCTGGAAAGAGTGTTGCCTGCTGATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAATCCATGTTCTCGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGCCCGCCGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAAAACTGGGGCATCGTCCGTACGTTTTTATCCACGTTATGAAGGTAATTTGCGCGACGTATTATCGATTATCGCTAACGACATTGCCTATGTACGGGAAACGTATCAGGACAGCGGCCTGACTTTTACGATCGAGCAGCATGAAGATTTAAAAAGTCATGAGCTGGTGTCGCTGGTCAAAGAAAGTGAGATGGAATCTCTTTCCTTACTGTTTGATTTTGCGAACATGATCAATGCAAATGAGCATCCCATCGACGCTTTAAAAACGATGGCACCGCATATTACCCAGGTCCATATCAAAGATGCCTTGATCGTTAAAGAACCGGGTGGCCTGGGTCATAAAGCCTGTATTTCAGGTCAGGGTGATATGCCGTTCAAAGCGTTATTAACGCACCTTATCTGCCTGGGTGATGATGAGCCGCAGGTGACGGCATATGGCCTGGAAGAAGAGGTTGATTACTATGCGCCGGCGTTCCGCTTTGAAGACGAAGATGATAATCCGTGGATCCCTTATCGCCAGATGAGTGAAACACCATTGCCAGAAAATCATTTACTGGATGCGCGGTTACGTAAAGAAAAAGAAGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCAAACCATCTTCTGAACCACTAA", - "dna_sequence_length": 981, - "functions": [ - "putative sugar phosphate isomerase" - ], - "id": "CDS_3802", - "location": [ - [ - "NC_000913", - 4061165, - "+", - 981 - ] - ], - "md5": "b8715118c629bf654d4af6e514766a29", - "parent_gene": "", - "protein_md5": "bb3ff00a8814874d13f7e84d961e5e68", - "protein_translation": "MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGERFSLGNMDDKELSAFGDKARRLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYEGNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHEDLKSHELVSLVKESEMESLSLLFDFANMINANEHPIDALKTMAPHITQVHIKDALIVKEPGGLGHKACISGQGDMPFKALLTHLICLGDDEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPENHLLDARLRKEKEDAINQINHVRNVLQQIKQEANHLLNH", - "protein_translation_length": 326, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yihN" - ], - [ - "gene_synonym", - "ECK3867" - ], - [ - "gene_synonym", - "ASAP:ABE-0012656" - ], - [ - "gene_synonym", - "GI:16131714" - ], - [ - "gene_synonym", - "GeneID:948365" - ], - [ - "gene_synonym", - "EcoGene:EG11840" - ], - [ - "gene_synonym", - "JW3845" - ], - [ - "gene_synonym", - "b3874" - ], - [ - "gene_synonym", - "NP_418310.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32135" - ] - ], - "dna_sequence": "ATGCTCACGAAAAAGAAATGGGCGTTATTTAGTCTATTAACACTGTGTGGCGGTACAATTTATAAATTACCGTCGCTGAAAGATGCGTTTTATATCCCGATGCAGGAATATTTCCATTTGACCAATGGTCAAATTGGTAATGCTATGTCGGTAAACTCATTTGTCACCACAGTGGGCTTTTTTCTGTCTATTTATTTTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTATTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGGGCAATAGCGAACAACAAGGTCGGTTGTTTGGCTTCTTCGAAACAGGGCGTGGCATTGTCGATACCGTGGTGGCATTTTCTGCGTTGGCAGTATTTACCTGGTTTGGCAGTGGCTTATTAGGTTTTAAAGCAGGCATCTGGTTCTATTCCCTTATTGTGATTGCCGTAGGCATTATTATTTTCTTTGTCCTGAATGACAAAGAAGAGGCACCGTCCGTTGAGGTGAAAAAAGAAGACGGAGCATCGAAAAACACCAGTATGACCTCGGTGCTGAAAGACAAAACTATCTGGCTTATCGCTTTTAACGTCTTCTTCGTTTACGCGGTTTACTGTGGCCTGACATTCTTCATTCCATTCCTGAAAAACATCTATCTATTGCCCGTTGCGCTGGTGGGGGCTTACGGCATCATTAACCAATACTGTCTGAAAATGATTGGTGGACCGATTGGTGGCATGATTTCAGATAAGATCCTGAAATCGCCAAGTAAATATCTATGCTACACCTTTATCATTAGTACCGCTGCGCTCGTACTGTTGATTATGCTGCCGCACGAAAGTATGCCGGTCTATTTAGGGATGGCATGTACGCTGGGCTTTGGCGCGATAGTCTTTACACAGCGAGCCGTATTTTTTGCACCTATCGGCGAAGCAAAAATTGCTGAAAATAAAACAGGTGCGGCGATGGCGTTGGGTAGCTTTATTGGTTACGCTCCGGCGATGTTCTGCTTCAGTCTGTATGGCTACATTCTGGATTTAAATCCGGGGATTATTGGCTACAAAATCGTGTTTGGCATTATGGCCTGCTTCGCATTCAGTGGTGCGGTGGTTTCCGTAATGCTGGTTAAGCGTATTAGCCAACGTAAGAAAGAGATGCTGGCGGCTGAAGCTTAA", - "dna_sequence_length": 1266, - "functions": [ - "MFS transporter family protein" - ], - "id": "CDS_3803", - "location": [ - [ - "NC_000913", - 4062247, - "+", - 1266 - ] - ], - "md5": "7da45241369f410b799b424478fd640b", - "parent_gene": "", - "protein_md5": "e18d7354ad3b11036c819aa03d24cc9c", - "protein_translation": "MLTKKKWALFSLLTLCGGTIYKLPSLKDAFYIPMQEYFHLTNGQIGNAMSVNSFVTTVGFFLSIYFADKLPRRYTMSFSLIATGLLGVYLTTMPGYWGILFVWALFGVTCDMMNWPVLLKSVSRLGNSEQQGRLFGFFETGRGIVDTVVAFSALAVFTWFGSGLLGFKAGIWFYSLIVIAVGIIIFFVLNDKEEAPSVEVKKEDGASKNTSMTSVLKDKTIWLIAFNVFFVYAVYCGLTFFIPFLKNIYLLPVALVGAYGIINQYCLKMIGGPIGGMISDKILKSPSKYLCYTFIISTAALVLLIMLPHESMPVYLGMACTLGFGAIVFTQRAVFFAPIGEAKIAENKTGAAMALGSFIGYAPAMFCFSLYGYILDLNPGIIGYKIVFGIMACFAFSGAVVSVMLVKRISQRKKEMLAAEA", - "protein_translation_length": 421, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948366" - ], - [ - "gene_synonym", - "yshA" - ], - [ - "gene_synonym", - "GI:16131715" - ], - [ - "gene_synonym", - "EcoGene:EG13374" - ], - [ - "gene_synonym", - "ASAP:ABE-0012659" - ], - [ - "gene_synonym", - "JW3846" - ], - [ - "gene_synonym", - "ECK3868" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P76773" - ], - [ - "gene_synonym", - "b3875" - ], - [ - "gene_synonym", - "ompL" - ], - [ - "gene_synonym", - "NP_418311.1" - ] - ], - "dna_sequence": "ATGAAAAAGATTAATGCAATAATTTTATTATCTTCTCTGACCTCTGCCTCGGTATTTGCTGGCGCATACGTCGAAAACAGGGAGGCATATAATCTTGCCTCCGATCAGGGCGAGGTTATGCTACGTGTGGGTTATAACTTCGATATGGGCGCGGGTATTATGTTAACCAATACCTACAACTTTCAGCGAGAAGATGAACTAAAACATGGATATAACGAAATTGAAGGCTGGTATCCGTTATTTAAACCAACCGATAAATTAACCATCCAGCCCGGTGGCTTAATTAATGATAAGAGTATCGGTTCGGGTGGTGCAGTGTATCTGGACGTCAACTATAAATTTGTACCATGGTTTAATCTGACAGTACGAAATCGCTATAACCATAATAACTATAGTTCAACAGATTTGAGCGGGGAACTGGATAATAATGACACCTATGAAATTGGCACCTACTGGAATTTTAAAATCACCGATAAATTTTCCTATACATTTGAGCCACATTACTTCATGCGAGTGAATGACTTTAATAGTAGCAACGGGAAAGATCATCATTGGGAAATCACTAACACCTTCCGTTACCGTATTAATGAACACTGGCTCCCTTATTTCGAATTGCGCTGGTTAGACCGCAACGTCGAACCGTACCACCGCGAGCAAAACCAGATCCGTATCGGGACGAAGTATTTCTTCTGA", - "dna_sequence_length": 693, - "functions": [ - "outer membrane porin L", - "putative sulpholipid porin" - ], - "id": "CDS_3804", - "location": [ - [ - "NC_000913", - 4064295, - "-", - 693 - ] - ], - "md5": "fa68008fd664532ecd2008f7a04ca145", - "parent_gene": "", - "protein_md5": "56bb9020f9846dbe60628623abc4d00e", - "protein_translation": "MKKINAIILLSSLTSASVFAGAYVENREAYNLASDQGEVMLRVGYNFDMGAGIMLTNTYNFQREDELKHGYNEIEGWYPLFKPTDKLTIQPGGLINDKSIGSGGAVYLDVNYKFVPWFNLTVRNRYNHNNYSSTDLSGELDNNDTYEIGTYWNFKITDKFSYTFEPHYFMRVNDFNSSNGKDHHWEITNTFRYRINEHWLPYFELRWLDRNVEPYHREQNQIRIGTKYFF", - "protein_translation_length": 230, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yihO" - ], - [ - "gene_synonym", - "EcoGene:EG11841" - ], - [ - "gene_synonym", - "GeneID:948377" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32136" - ], - [ - "gene_synonym", - "squO" - ], - [ - "gene_synonym", - "YP_026275.1" - ], - [ - "gene_synonym", - "ECK3869" - ], - [ - "gene_synonym", - "b3876" - ], - [ - "gene_synonym", - "GI:49176435" - ], - [ - "gene_synonym", - "JW5852" - ], - [ - "gene_synonym", - "ASAP:ABE-0012661" - ] - ], - "dna_sequence": "ATGTCTGACCATAATCCACTGACATTAAAACTGAATCTGCGGGAAAAAATCGCCTATGGTATGGGCGACGTCGGTTCGAATTTAATGCTCTGCATCGGTACTCTGTATCTCCTCAAATTTTATACCGATGAATTAGGGATGCCTGCTTACTATGGCGGGATTATCTTTCTGGTGGCGAAGTTTTTTACCGCGTTTACCGATATGCTCACCGGATTTTTACTCGACTCGCGGAAAAATATTGGGCCTAAAGGCAAATTTCGTCCCTTTATTTTATATGCAGCGGTTCCGGCGGCGTTAATTGCAACGCTCCAGTTTATCGCCACCACCTTTTGTTTGCCGGTTAAAACGACGATTGCCACCGCGCTGTTTATGATGTTTGGACTTTCATACAGTCTGATGAACTGCTCGTATGGTGCGATGATCCCGGCAATTACCAAAAACCCGAATGAGCGCGCGCAGCTCGCGGCTTACCGCCAGGGTGGTGCAACCATAGGGCTATTGATTTGTACCGTGGCGTTTATTCCGTTGCAGTCGCTTTTTTCTGACTCAACCGTCGGTTATGCCTGTGCGGCACTTATGTTCTCCATTGGCGGCTTTATTTTTATGATGCTGTGCTACAGAGGCGTCAAAGAGCATTATGTGGACACAACGCCAACCGGACATAAAGCCAGTATTCTCAAATCATTTTGCGCGATATTTCGGAATCCGCCATTGCTGGTTTTATGCATTGCTAACTTGTGTACCCTGGCGGCATTTAATATCAAACTGGCGATTCAGGTCTATTACACCCAGTATGTGCTGAATGATATTAATTTATTGTCGTGGATGGGATTCTTCAGTATGGGATGCATCCTCATCGGCGTATTACTGGTGCCATTAACTGTAAAATGTTTTGGTAAAAAACAGGTTTATCTGGCTGGCATGGTGCTGTGGGCGGTGGGTGATATACTGAATTATTTCTGGGGAAGTAACTCTTTCACTTTCGTCATGTTCTCTTGTGTCGCCTTTTTTGGCACGGCCTTTGTAAACAGCCTGAACTGGGCACTGGTACCAGATACCGTAGATTACGGTGAATGGAAAACCGGTATTCGTGCCGAAGGTTCTGTTTATACCGGTTATACCTTCTTTCGTAAAATTTCTGCCGCACTTGCTGGCTTCTTGCCAGGCATTATGCTGACGCAAATTGGTTATGTTCCCAACATCGCGCAAAGCGATGCGACATTACAGGGTTTGCGTCAGCTCATTTTTATCTGGCCTTGTGCACTGGCAATTATTGCTGCATTGACGATGGGATTCTTTTACACACTCAATGAAAAACGGTTTGCATTGATTATTGAGGAAATCAACCAACGCAAAAATAAAGAGATGGCGACAGAAGAAAAAACGGCTTCCGTAACGTTATAA", - "dna_sequence_length": 1404, - "functions": [ - "putative sulphoquinovose importer" - ], - "id": "CDS_3805", - "location": [ - [ - "NC_000913", - 4065766, - "-", - 1404 - ] - ], - "md5": "f64eaeadf437895a552949bbecc2e798", - "parent_gene": "", - "protein_md5": "88a5d2b1978bfe72c6b521d901c6032a", - "protein_translation": "MSDHNPLTLKLNLREKIAYGMGDVGSNLMLCIGTLYLLKFYTDELGMPAYYGGIIFLVAKFFTAFTDMLTGFLLDSRKNIGPKGKFRPFILYAAVPAALIATLQFIATTFCLPVKTTIATALFMMFGLSYSLMNCSYGAMIPAITKNPNERAQLAAYRQGGATIGLLICTVAFIPLQSLFSDSTVGYACAALMFSIGGFIFMMLCYRGVKEHYVDTTPTGHKASILKSFCAIFRNPPLLVLCIANLCTLAAFNIKLAIQVYYTQYVLNDINLLSWMGFFSMGCILIGVLLVPLTVKCFGKKQVYLAGMVLWAVGDILNYFWGSNSFTFVMFSCVAFFGTAFVNSLNWALVPDTVDYGEWKTGIRAEGSVYTGYTFFRKISAALAGFLPGIMLTQIGYVPNIAQSDATLQGLRQLIFIWPCALAIIAALTMGFFYTLNEKRFALIIEEINQRKNKEMATEEKTASVTL", - "protein_translation_length": 467, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3848" - ], - [ - "gene_synonym", - "ECK3870" - ], - [ - "gene_synonym", - "EcoGene:EG11842" - ], - [ - "gene_synonym", - "GeneID:948371" - ], - [ - "gene_synonym", - "NP_418313.4" - ], - [ - "gene_synonym", - "squP" - ], - [ - "gene_synonym", - "b3877" - ], - [ - "gene_synonym", - "GI:145698335" - ], - [ - "gene_synonym", - "ASAP:ABE-0012664" - ], - [ - "gene_synonym", - "yihP" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32137" - ] - ], - "dna_sequence": "ATGAGTCACATCACAACGGAAGATCCAGCAACTTTACGCCTGCCCTTTAAAGAGAAACTCTCTTACGGTATTGGCGACCTGGCCTCTAACATCCTGCTGGATATCGGTACGCTTTATCTTTTGAAGTTTTATACCGACGTTCTGGGGCTGCCAGGCACCTATGGCGGCATTATCTTTTTGATTTCAAAATTCTTTACTGCGTTTACCGATATGGGTACCGGCATTATGTTGGATTCCCGACGCAAGATCGGTCCAAAAGGTAAGTTCCGTCCTTTTATTCTGTATGCGTCATTCCCGGTCACCTTACTGGCGATCGCCAACTTTGTCGGCACACCGTTTGATGTCACCGGTAAAACGGTGATGGCCACTATTCTGTTTATGCTTTACGGACTGTTTTTCAGCATGATGAACTGCTCCTACGGCGCAATGGTTCCCGCTATCACCAAAAACCCCAACGAACGCGCCTCACTGGCGGCATGGCGTCAGGGCGGCGCTACGCTGGGCCTGCTGCTGTGCACGGTGGGATTCGTGCCAGTTATGAATCTTATCGAAGGTAATCAGCAACTTGGCTATATCTTCGCCGCCACGCTGTTTTCACTGTTTGGCCTGCTGTTTATGTGGATCTGCTACTCGGGCGTGAAAGAGCGTTATGTCGAAACCCAGCCTGCTAATCCGGCGCAAAAGCCGGGCCTGCTGCAATCTTTCCGCGCAATTGCGGGTAACCGCCCGCTGTTCATTCTGTGCATTGCCAACCTCTGCACTTTAGGGGCGTTTAACGTCAAGCTCGCCATCCAGGTCTATTACACCCAGTACGTGCTTAACGATCCCATCCTGTTGTCGTATATGGGATTTTTCAGCATGGGCTGTATTTTCATCGGCGTATTCCTGATGCCTGCCTCAGTCAGACGTTTTGGCAAGAAGAAAGTTTATATCGGCGGCCTGCTGATTTGGGTGCTGGGCGATCTGCTCAACTATTTCTTCGGCGGCGGTTCGGTCAGCTTCGTGGCGTTCTCCTGCCTGGCGTTCTTTGGCTCAGCGTTTGTTAACAGCCTGAACTGGGCGCTGGTTTCCGACACCGTCGAGTACGGCGAGTGGCGCACCGGCGTGCGTTCGGAAGGAACGGTCTACACCGGTTTTACCTTCTTTCGCAAAGTGTCTCAGGCGCTGGCTGGTTTCTTCCCCGGCTGGATGCTGACGCAAATTGGCTATGTGCCGAACGTCGCACAGGCTGACCACACCATTGAAGGGTTACGCCAGTTGATCTTCATCTACCCAAGCGCACTGGCGGTAGTCACCATTGTGGCGATGGGTTGCTTCTACAGCCTGAACGAGAAGATGTATGTCCGCATTGTGGAAGAGATAGAAGCCCGTAAACGCACGGCGTAA", - "dna_sequence_length": 1386, - "functions": [ - "putative 2,3-dihydroxypropane-1-sulphonate exporter, membrane protein" - ], - "id": "CDS_3806", - "location": [ - [ - "NC_000913", - 4067194, - "-", - 1386 - ] - ], - "md5": "f8a15944a6ceff77a71979145432acda", - "parent_gene": "", - "protein_md5": "279189db22aff17993d99c30a3a90f63", - "protein_translation": "MSHITTEDPATLRLPFKEKLSYGIGDLASNILLDIGTLYLLKFYTDVLGLPGTYGGIIFLISKFFTAFTDMGTGIMLDSRRKIGPKGKFRPFILYASFPVTLLAIANFVGTPFDVTGKTVMATILFMLYGLFFSMMNCSYGAMVPAITKNPNERASLAAWRQGGATLGLLLCTVGFVPVMNLIEGNQQLGYIFAATLFSLFGLLFMWICYSGVKERYVETQPANPAQKPGLLQSFRAIAGNRPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSYMGFFSMGCIFIGVFLMPASVRRFGKKKVYIGGLLIWVLGDLLNYFFGGGSVSFVAFSCLAFFGSAFVNSLNWALVSDTVEYGEWRTGVRSEGTVYTGFTFFRKVSQALAGFFPGWMLTQIGYVPNVAQADHTIEGLRQLIFIYPSALAVVTIVAMGCFYSLNEKMYVRIVEEIEARKRTA", - "protein_translation_length": 461, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948376" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32138" - ], - [ - "gene_synonym", - "JW3849" - ], - [ - "gene_synonym", - "EcoGene:EG11843" - ], - [ - "gene_synonym", - "ECK3871" - ], - [ - "gene_synonym", - "GI:16131718" - ], - [ - "gene_synonym", - "NP_418314.1" - ], - [ - "gene_synonym", - "squQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0012666" - ], - [ - "gene_synonym", - "b3878" - ], - [ - "gene_synonym", - "yihQ" - ] - ], - "dna_sequence": "ATGGATACGCCACGTCCACAGTTATTAGATTTTCAATTTCATCAGAATAACGACAGTTTTACCCTACATTTTCAACAACGTCTTATTTTAACCCATAGCAAAGATAATCCTTGTTTATGGATTGGCTCAGGTATAGCGGATATCGATATGTTCCGCGGTAATTTCAGCATTAAAGATAAACTACAGGAGAAAATTGCGCTTACCGACGCCATCGTCAGCCAGTCACCGGATGGTTGGTTAATTCATTTCAGCCGTGGTTCTGACATTAGCGCCACGCTGAATATCTCTGCCGACGATCAGGGGCGTTTATTGCTGGAACTACAAAACGACAACCTTAACCACAACCGTATCTGGCTGCGCCTTGCCGCTCAACCAGAGGACCATATCTACGGCTGCGGCGAACAGTTTTCCTACTTCGATCTGCGTGGCAAACCGTTCCCGCTATGGACCAGTGAACAAGGCGTTGGTCGCAACAAACAAACCTATGTCACCTGGCAGGCCGACTGCAAAGAAAATGCGGGCGGCGACTATTACTGGACTTTCTTCCCACAGCCTACGTTTGTCAGCACGCAGAAGTATTACTGCCATGTTGATAACAGTTGCTATATGAACTTCGACTTTAGTGCCCCGGAATACCATGAACTGGCGCTGTGGGAAGACAAAGCAACGCTGCGTTTTGAATGTGCTGACACATACATTTCCCTGCTGGAAAAATTAACCGCCCTGCTGGGACGCCAGCCAGAACTGCCCGACTGGATTTATGACGGAGTAACGCTCGGCATTCAGGGCGGGACGGAAGTGTGCCAGAAGAAACTGGACACCATGCGTAACGCGGGCGTGAAGGTCAACGGCATCTGGGCGCAGGACTGGTCCGGTATTCGTATGACCTCTTTTGGCAAACGCGTGATGTGGAACTGGAAGTGGAACAGCGAAAACTACCCGCAACTGGATTCACGCATTAAGCAGTGGAATCAGGAGGGCGTGCAGTTCCTGGCCTATATCAACCCGTATGTTGCCAGCGATAAAGATCTCTGCGAAGAAGCGGCACAACACGGCTATCTGGCAAAAGATGCCTCTGGCGGTGACTATCTGGTGGAGTTTGGCGAGTTTTACGGCGGCGTTGTCGATCTCACTAATCCAGAAGCCTACGCCTGGTTCAAGGAAGTGATCAAAAAGAACATGATTGAACTCGGCTGCGGCGGCTGGATGGCTGACTTCGGCGAGTATCTGCCCACCGACACGTACTTGCATAACGGCGTCAGTGCCGAAATTATGCATAACGCCTGGCCTGCGCTGTGGGCGAAGTGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTTTTCTTTATGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTGGGCGGGCGACCAGAACGTCGACTGGAGTCTCGACGATGGCCTGGCGTCGGTTGTCCCGGCGGCGCTGTCGCTGGCAATGACCGGACATGGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTGGTGCGATTTCAGCGCCTTCACGCCGATGATGCGCACCCACGAAGGTAACCGTCCTGGCGACAACTGGCAGTTTGACGGCGACGCAGAAACCATCGCCCATTTCGCCCGTATGACCACCGTCTTCACCACCCTGAAACCTTACCTGAAAGAGGCCGTCGCGCTGAATGCGAAGTCCGGCCTGCCGGTTATGCGCCCGCTGTTCCTGCATTACGAAGACGATGCGCACACTTACACCCTGAAATATCAGTACCTGTTAGGTCGCGACATTCTGGTCGCTCCGGTGCATGAAGAAGGCCGTAGCGACTGGACGCTCTATCTGCCGGAGGATAACTGGGTCCACGCCTGGACGGGTGAAGCGTTCCGGGGCGGGGAAGTTACCGTTAATGCGCCCATCGGCAAGCCGCCGGTCTTTTATCGCGCCGATAGCGAATGGGCGGCACTGTTCGCGTCGTTAAAAAGCATCTAA", - "dna_sequence_length": 2037, - "functions": [ - "putative sulpholipid alpha-glucosidase", - "alpha-glucosyl fluoride glucosidase" - ], - "id": "CDS_3807", - "location": [ - [ - "NC_000913", - 4069276, - "-", - 2037 - ] - ], - "md5": "d3035616f60aea29e8a48e984b55f2dd", - "parent_gene": "", - "protein_md5": "d1c81df8e1d1f0037390b2b97eb175d7", - "protein_translation": "MDTPRPQLLDFQFHQNNDSFTLHFQQRLILTHSKDNPCLWIGSGIADIDMFRGNFSIKDKLQEKIALTDAIVSQSPDGWLIHFSRGSDISATLNISADDQGRLLLELQNDNLNHNRIWLRLAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQTYVTWQADCKENAGGDYYWTFFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALWEDKATLRFECADTYISLLEKLTALLGRQPELPDWIYDGVTLGIQGGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRMTSFGKRVMWNWKWNSENYPQLDSRIKQWNQEGVQFLAYINPYVASDKDLCEEAAQHGYLAKDASGGDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNMIELGCGGWMADFGEYLPTDTYLHNGVSAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGSTGSQKYSTMMWAGDQNVDWSLDDGLASVVPAALSLAMTGHGLHHSDIGGYTTLFEMKRSKELLLRWCDFSAFTPMMRTHEGNRPGDNWQFDGDAETIAHFARMTTVFTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAHTYTLKYQYLLGRDILVAPVHEEGRSDWTLYLPEDNWVHAWTGEAFRGGEVTVNAPIGKPPVFYRADSEWAALFASLKSI", - "protein_translation_length": 678, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11844" - ], - [ - "gene_synonym", - "ECK3872" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32139" - ], - [ - "gene_synonym", - "JW3850" - ], - [ - "gene_synonym", - "squR" - ], - [ - "gene_synonym", - "GeneID:948375" - ], - [ - "gene_synonym", - "ASAP:ABE-0012669" - ], - [ - "gene_synonym", - "GI:49176437" - ], - [ - "gene_synonym", - "b3879" - ], - [ - "gene_synonym", - "yihR" - ], - [ - "gene_synonym", - "NP_418315.3" - ] - ], - "dna_sequence": "ATGTCGTTAATTAAGGTGCCTTGTATGCAAATCACCAATATGCATTGCAGTGGACAGACCGTTTCACTTGCCGCGGGGGATTATCACGCGACCATTGTGACCGTCGGTGCTGGTCTGGCTGAATTAACCTTTCAGGGTTGTCATTTAGTCATCCCGCACAAACCCGAAGAGATGCCGCTGGCGCATCTGGGTAAAGTGCTTATTCCGTGGCCGAACCGGATCGCCAACGGCTGTTACCGCTATCAGGGGCAGGAATATCAGTTACCCATTAATGAACATAGTTCAAAAGCCGCTATTCACGGGCTGCTTGCCTGGCGAGACTGGCAAATTAGTGAATTAACCGCCACCAGCGTTACCCTGACAGCTTTTCTGCCGCCCAGTTACGGCTATCCGTTTATGCTGGCTTCACAAGTTGTTTATTCGCTCAACGCACACACGGGTCTTTCCGTTGAGATCGCAAGCCAGAATATCGGCACTGTCGCAGCGCCTTATGGCGTGGGTATTCATCCTTATTTAACCTGCAACTTAACATCTGTTGATGAATATCTGTTCCAGCTTCCGGCAAACCAGGTTTATGCCGTCGATGAGCACGCGAATCCGACAACGCTTCACCACGTTGATGAGCTGGATTTAAATTTCACGCAGGCGAAAAAAATAGCCGCGACAAAAATCGACCACACCTTTAAAACCGCTAATGATTTGTGGGAAATGACCATTACCCATCCACAGCAGGCGCTTTCGGTAAGCCTTTGTTCCGATCAACTCTGGGTGCAGGTTTATAGCGGTGAAAAATTACAGCGTCAGGGACTGGCAGTTGAACCTATGAGTTGCCCGCCTAACGCCTTTAATTCAGGTATCGACTTATTATTACTGGAATCAGGAAAACCGCACCGCCTGTTTTTTAATATTTACGGACAGAGAAAATAA", - "dna_sequence_length": 927, - "functions": [ - "putative sulphoquinovose mutarotase" - ], - "id": "CDS_3808", - "location": [ - [ - "NC_000913", - 4070401, - "-", - 927 - ] - ], - "md5": "fc61b1321beca015e4ed81788e24f5d9", - "parent_gene": "", - "protein_md5": "a48761ec0424bffbccb1f5fcda6e7a6d", - "protein_translation": "MSLIKVPCMQITNMHCSGQTVSLAAGDYHATIVTVGAGLAELTFQGCHLVIPHKPEEMPLAHLGKVLIPWPNRIANGCYRYQGQEYQLPINEHSSKAAIHGLLAWRDWQISELTATSVTLTAFLPPSYGYPFMLASQVVYSLNAHTGLSVEIASQNIGTVAAPYGVGIHPYLTCNLTSVDEYLFQLPANQVYAVDEHANPTTLHHVDELDLNFTQAKKIAATKIDHTFKTANDLWEMTITHPQQALSVSLCSDQLWVQVYSGEKLQRQGLAVEPMSCPPNAFNSGIDLLLLESGKPHRLFFNIYGQRK", - "protein_translation_length": 308, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11845" - ], - [ - "gene_synonym", - "ECK3873" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32140" - ], - [ - "gene_synonym", - "GI:90111658" - ], - [ - "gene_synonym", - "NP_418316.4" - ], - [ - "gene_synonym", - "GeneID:948374" - ], - [ - "gene_synonym", - "squS" - ], - [ - "gene_synonym", - "b3880" - ], - [ - "gene_synonym", - "ASAP:ABE-0012673" - ], - [ - "gene_synonym", - "yihS" - ], - [ - "gene_synonym", - "JW5569" - ], - [ - "gene_synonym", - "manC?" - ] - ], - "dna_sequence": "ATGAAATGGTTTAACACCCTAAGCCACAACCGTTGGCTGGAACAGGAAACCGACCGCATCTTTGATTTTGGTAAAAATTCCGTAGTGCCGACTGGTTTTGGCTGGTTAGGCAATAAAGGGCAAATCAAAGAAGAGATGGGCACCCATCTGTGGATCACCGCTCGTATGTTGCACGTTTATTCCGTTGCTGCGGCGATGGGTCGACCTGGCGCTTACTCGTTGGTTGATCACGGTATCAAAGCCATGAACGGCGCACTGCGTGATAAAAAATATGGCGGCTGGTATGCCTGCGTGAATGACGAGGGCGTGGTGGATGCCTCCAAACAGGGCTATCAACACTTCTTTGCTCTGCTGGGTGCCGCCAGCGCCGTCACAACGGGTCACCCGGAAGCGCGCAAGCTGCTCGATTACACCATTGAAATTATCGAGAAATATTTCTGGAGCGAAGAAGAGCAGATGTGCCTGGAATCCTGGGACGAAGCCTTCAGCAAAACCGAAGAGTACCGCGGCGGCAATGCCAATATGCACGCGGTGGAAGCTTTCTTGATTGTTTATGACGTCACTCACGACAAAAAATGGCTGGATCGCGCGATTCGCGTGGCTTCCGTGATTATCCACGACGTCGCCAGAAATAATCATTATCGCGTTAACGAACACTTCGATACCCAGTGGAATCCGCTGCCGGATTACAACAAAGATAACCCGGCGCATCGCTTCCGCGCGTTCGGAGGTACACCAGGCCACTGGATCGAATGGGGCCGTTTAATGCTGCACATCCATGCTGCCCTGGAAGCCCGTTGCGAACAACCACCAGCATGGCTGCTAGAAGATGCCAAAGGTCTGTTTAACGCCACCGTGCGCGATGCCTGGGCACCCGATGGCGCGGACGGGATTGTTTATACCGTTGACTGGGAAGGAAAACCGGTGGTCCGCGAACGTGTACGTTGGCCTATCGTCGAAGCAATGGGTACGGCCTACGCGCTCTACACCGTCACTGGCGATCGCCAGTATGAAACCTGGTATCAAACATGGTGGGAGTACTGCATTAAGTACCTGATGGACTATGAAAATGGTTCCTGGTGGCAGGAGCTGGATGCGGACAATAAGGTCACCACCAAAGTCTGGGACGGCAAACAGGATATTTATCACCTGCTGCATTGCCTGGTGATCCCGCGTATCCCGTTAGCGCCCGGCATGGCTCCAGCGGTTGCAGCGGGTCTGCTGGATATTAATGCGAAATAA", - "dna_sequence_length": 1242, - "functions": [ - "sulphoquinovose isomerase" - ], - "id": "CDS_3809", - "location": [ - [ - "NC_000913", - 4071756, - "-", - 1242 - ] - ], - "md5": "2ad8bced8bed8ecbae4b89e94350e45d", - "parent_gene": "", - "protein_md5": "0ba5f9fdc6b633ff40b7eae9da99ac0f", - "protein_translation": "MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAAAMGRPGAYSLVDHGIKAMNGALRDKKYGGWYACVNDEGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDEAFSKTEEYRGGNANMHAVEAFLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFRAFGGTPGHWIEWGRLMLHIHAALEARCEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIVEAMGTAYALYTVTGDRQYETWYQTWWEYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRIPLAPGMAPAVAAGLLDINAK", - "protein_translation_length": 413, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3874" - ], - [ - "gene_synonym", - "EcoGene:EG11846" - ], - [ - "gene_synonym", - "GeneID:948373" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32141" - ], - [ - "gene_synonym", - "JW3852" - ], - [ - "gene_synonym", - "NP_418317.1" - ], - [ - "gene_synonym", - "b3881" - ], - [ - "gene_synonym", - "squT" - ], - [ - "gene_synonym", - "ASAP:ABE-0012675" - ], - [ - "gene_synonym", - "yihT" - ], - [ - "gene_synonym", - "GI:16131721" - ] - ], - "dna_sequence": "ATGAATAAGTACACCATCAACGACATTACGCGCGCATCGGGCGGTTTTGCCATGCTGGCGGTCGATCAGCGCGAAGCCATGCGCATGATGTTTGCCGCGGCTGGGGCACCCGCTCCGGTAGCCGATAGCGTTTTAACTGATTTCAAAGTTAACGCTGCAAAGGCCCTCTCGCCTTATGCCTCGGCGATTCTGGTAGATCAACAATTCTGCTACCGCCAGGTGGTTGAGCAAAACGCGATTGCCAAAAGTTGCGCCATGATTGTCGCCGCCGATGAGTTCATTCCTGGCAACGGTATTCCGGTCGATAGCGTGGTTATTGACCGCAAAATCAATCCGCTACAGATCAAACAAGACGGTGGCAAAGCCTTAAAACTGCTGGTGCTGTGGCGTAGTGATGAAGATGCGCAGCAACGTCTGGATATGGTGAAAGAGTTCAACGAACTGTGCCACTCACACGGTCTGGTAAGCATCATTGAGCCAGTCGTCCGCCCACCGCGTCGTGGCGATAAATTCGATCGCGAACAAGCGATCATCGATGCCGCCAAAGAGCTGGGCGACAGTGGCGCTGACCTCTACAAAGTTGAAATGCCGCTTTATGGCAAAGGTCCGCAACAAGAGCTTCTCTGTGCTTCACAACGTCTGAATGACCATATCAATATGCCATGGGTGATCCTCTCTTCCGGTGTCGACGAAAAACTGTTCCCGCGTGCCGTACGCGTGGCAATGACGGCGGGCGCATCGGGATTCCTGGCAGGCCGTGCAGTCTGGGCATCGGTCGTCGGTTTACCAGACAACGAGCTGATGCTGCGTGACGTTTGCGCACCGAAATTACAACAACTTGGCGATATCGTCGACGAAATGATGGCTAAACGCCGCTAA", - "dna_sequence_length": 879, - "functions": [ - "6-deoxy-6-sulphofructose-1-phosphate aldolase" - ], - "id": "CDS_3810", - "location": [ - [ - "NC_000913", - 4072651, - "-", - 879 - ] - ], - "md5": "12ac7c38439183dec2d8cf515f341491", - "parent_gene": "", - "protein_md5": "bf15a1d99361bbe58dd8eebbc691370d", - "protein_translation": "MNKYTINDITRASGGFAMLAVDQREAMRMMFAAAGAPAPVADSVLTDFKVNAAKALSPYASAILVDQQFCYRQVVEQNAIAKSCAMIVAADEFIPGNGIPVDSVVIDRKINPLQIKQDGGKALKLLVLWRSDEDAQQRLDMVKEFNELCHSHGLVSIIEPVVRPPRRGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGPQQELLCASQRLNDHINMPWVILSSGVDEKLFPRAVRVAMTAGASGFLAGRAVWASVVGLPDNELMLRDVCAPKLQQLGDIVDEMMAKRR", - "protein_translation_length": 292, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11847" - ], - [ - "gene_synonym", - "ECK3875" - ], - [ - "gene_synonym", - "NP_418318.1" - ], - [ - "gene_synonym", - "JW3853" - ], - [ - "gene_synonym", - "b3882" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9V8" - ], - [ - "gene_synonym", - "ASAP:ABE-0012678" - ], - [ - "gene_synonym", - "squU" - ], - [ - "gene_synonym", - "GI:16131722" - ], - [ - "gene_synonym", - "GeneID:948372" - ], - [ - "gene_synonym", - "yihU" - ] - ], - "dna_sequence": "ATGGCAGCAATCGCGTTTATCGGTTTAGGACAAATGGGTTCGCCAATGGCGAGCAATTTATTGCAGCAAGGGCATCAACTTCGCGTCTTTGATGTGAACGCCGAAGCTGTGCGGCATCTGGTAGACAAAGGTGCGACTCCCGCCGCCAACCCGGCGCAGGCCGCTAAAGATGCCGAATTTATCATTACCATGTTGCCGAATGGCGATCTGGTGCGCAACGTGTTGTTCGGTGAAAACGGCGTTTGCGAAGGCTTATCTACCGATGCGCTGGTCATTGATATGTCCACCATCCATCCGCTGCAAACCGATAAATTGATTGCCGATATGCAAGCCAAAGGCTTCAGCATGATGGATGTTCCGGTAGGCCGTACTTCTGCAAATGCCATTACCGGTACTCTGTTACTGCTGGCTGGCGGCACCGCTGAACAAGTTGAACGTGCCACACCGATCCTGATGGCGATGGGCAGTGAGTTGATCAACGCTGGCGGTCCGGGCATGGGGATCCGCGTTAAGCTCATCAACAACTACATGAGCATCGCGCTCAATGCGCTTTCGGCAGAAGCCGCCGTTTTGTGCGAAGCCCTGAATCTTCCCTTCGATGTTGCCGTCAAAGTGATGAGCGGTACCGCCGCCGGTAAAGGTCACTTCACCACTTCCTGGCCAAACAAAGTCCTCAGCGGAGATCTTTCTCCCGCCTTCATGATCGATCTTGCCCATAAGGATCTTGGCATCGCCCTTGATGTCGCCAACCAGCTGCATGTGCCAATGCCGCTGGGGGCCGCCTCACGGGAGGTTTATAGCCAGGCGCGCGCAGCGGGTCGCGGTCGCCAGGACTGGTCCGCCATTCTGGAACAGGTCCGTGTCAGTGCCGGGATGACTGCCAAAGTAAAAATGTAA", - "dna_sequence_length": 897, - "functions": [ - "3-sulpholactaldehyde (SLA) reductase, NADH-dependent", - "gamma-hydroxybutyrate dehydrogenase, NADH-dependent" - ], - "id": "CDS_3811", - "location": [ - [ - "NC_000913", - 4073571, - "-", - 897 - ] - ], - "md5": "6f216d4d9d93ea9e1d9d2f4bfed483be", - "parent_gene": "", - "protein_md5": "679d405644fb92419f37416a17e37634", - "protein_translation": "MAAIAFIGLGQMGSPMASNLLQQGHQLRVFDVNAEAVRHLVDKGATPAANPAQAAKDAEFIITMLPNGDLVRNVLFGENGVCEGLSTDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSANAITGTLLLLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLINNYMSIALNALSAEAAVLCEALNLPFDVAVKVMSGTAAGKGHFTTSWPNKVLSGDLSPAFMIDLAHKDLGIALDVANQLHVPMPLGAASREVYSQARAAGRGRQDWSAILEQVRVSAGMTAKVKM", - "protein_translation_length": 298, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3876" - ], - [ - "gene_synonym", - "GeneID:948382" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32143" - ], - [ - "gene_synonym", - "GI:90111659" - ], - [ - "gene_synonym", - "NP_418319.2" - ], - [ - "gene_synonym", - "EcoGene:EG11848" - ], - [ - "gene_synonym", - "ASAP:ABE-0012681" - ], - [ - "gene_synonym", - "b3883" - ], - [ - "gene_synonym", - "squV" - ], - [ - "gene_synonym", - "yihV" - ], - [ - "gene_synonym", - "JW5568" - ] - ], - "dna_sequence": "ATGATTCGTGTTGCTTGTGTAGGTATAACCGTGATGGATCGCATCTATTACGTGGAAGGGTTACCGACGGAGAGCGGTAAATACGTGGCGAGAAATTATACGGAAGTTGGTGGCGGGCCAGCGGCGACGGCAGCGGTTGCGGCGGCAAGGCTGGGGGCGCAGGTCGATTTTATTGGTCGCGTAGGTGATGACGACACGGGCAACAGCCTGCTGGCAGAGCTGGAATCCTGGGGCGTTAACACCCGTTACACCAAACGGTATAACCAGGCGAAATCTTCGCAATCCGCCATCATGGTGGATACCAAAGGCGAGCGGATAATCATTAACTACCCCAGCCCGGATCTGCTGCCTGACGCAGAGTGGTTGGAGGAAATTGATTTCTCTCAGTGGGATGTTGTGCTGGCAGATGTACGCTGGCACGACGGCGCTAAAAAAGCCTTCACCCTGGCCCGTCAGGCGGGTGTGATGACCGTTCTGGACGGGGACATTACGCCGCAGGATATCAGTGAGCTGGTGGCATTAAGCGATCACGCGGCCTTTTCAGAACCGGGTCTGGCGCGCTTAACGGGCGTGAAAGAGATGGCCAGTGCGCTAAAACAGGCACAAACGCTCACAAATGGTCATGTCTATGTGACCCAGGGTAGCGCAGGCTGCGACTGGCTGGAAAATGGTGGGCGTCAGCATCAACCGGCCTTCAAAGTTGATGTGGTAGATACCACAGGTGCGGGTGATGTTTTTCACGGCGCTTTGGCGGTGGCGCTGGCAACAAGTGGGGATTTAGCGGAGTCAGTCCGCTTCGCCAGCGGTGTAGCGGCGTTAAAATGCACACGTCCCGGTGGACGAGCCGGGATCCCTGACTGTGATCAAACCCGATCTTTTTTGTCACTTTTTGTATAA", - "dna_sequence_length": 897, - "functions": [ - "6-deoxy-6-sulphofructose kinase" - ], - "id": 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"gene_synonym", - "b3885" - ] - ], - "dna_sequence": "ATGCTCTATATCTTTGATTTAGGTAATGTGATTGTCGATATCGACTTTAACCGTGTGCTGGGAGCCTGGAGCGATTTAACGCGTATTCCGCTGGCATCGCTTAAGAAGAGTTTTCATATGGGGGAGGCGTTTCATCAGCATGAGCGTGGGGAAATTAGCGACGAAGCGTTCGCAGAGGCGCTGTGTCATGAGATGGCTCTACCGCTAAGCTACGAGCAGTTCTCTCACGGCTGGCAGGCGGTGTTTGTTGCGCTGCGCCCGGAAGTGATCGCCATCATGCATAAACTGCGTGAGCAGGGGCATCGCGTGGTGGTGCTTTCCAATACCAACCGCCTGCATACCACCTTCTGGCCGGAAGAATACCCGGAAATTCGTGATGCTGCTGACCATATCTATCTGTCGCAAGATCTGGGGATGCGCAAACCTGAAGCACGAATTTACCAGCATGTTTTGCAGGCGGAAGGTTTTTCACCCAGCGATACGGTCTTTTTCGACGATAACGCCGATAATATAGAAGGAGCCAATCAGCTGGGCATTACCAGTATTCTGGTGAAAGATAAAACCACCATCCCGGACTATTTCGCGAAGGTGTTATGCTAA", - "dna_sequence_length": 600, - "functions": [ - "alpha-D-glucose-1-phosphate phosphatase, anomer-specific" - ], - "id": "CDS_3814", - "location": [ - [ - "NC_000913", - 4075553, - "+", - 600 - ] - ], - "md5": "a6275ff930afd4f76a76e9bf10bd2ea5", - "parent_gene": "", - "protein_md5": "321327a274d2aeebfd71273095e7e6dc", - "protein_translation": "MLYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDYFAKVLC", - "protein_translation_length": 199, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11851" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8K8" - ], - [ - "gene_synonym", - "ECK3879" - ], - [ - "gene_synonym", - "JW3857" - ], - [ - "gene_synonym", - "GeneID:948379" - ], - [ - "gene_synonym", - "rbn" - ], - [ - "gene_synonym", - "NP_418322.1" - ], - [ - "gene_synonym", - "b3886" - ], - [ - "gene_synonym", - "yihY" - ], - [ - "gene_synonym", - "ASAP:ABE-0012688" - ], - [ - "gene_synonym", - "GI:16131726" - ] - ], - "dna_sequence": "ATGCTAAAAACCATTCAGGACAAAGCCAGGCACCGTACCCGTCCACTATGGGCCTGGCTAAAACTACTCTGGCAACGCATTGATGAGGACAACATGACAACCCTGGCAGGTAACCTTGCCTATGTGTCGTTGCTCTCATTAGTGCCGCTGGTTGCCGTTGTTTTTGCGCTTTTCGCCGCTTTTCCCATGTTTTCCGACGTCAGCATTCAGTTACGTCACTTTATTTTTGCCAACTTTCTGCCTGCTACTGGCGATGTTATTCAGCGGTATATCGAACAATTTGTTGCCAATTCCAACAAGATGACCGCCGTTGGGGCGTGCGGGCTGATCGTCACCGCGTTATTGTTGATGTACTCCATCGATAGCGCGTTGAATACCATCTGGCGCAGTAAACGAGCGCGACCAAAAATTTACTCGTTCGCCGTGTACTGGATGATTTTAACGCTGGGGCCGCTGCTGGCAGGGGCCAGTCTGGCGATCAGTTCCTATTTGCTCTCCCTGCGCTGGGCGAGCGATCTCAATACTGTCATCGACAACGTGCTGCGTATTTTTCCGTTGCTGTTGTCGTGGATCTCCTTCTGGTTGCTGTACAGCATTGTTCCTACCATCCGCGTACCTAACCGCGACGCGATTGTCGGCGCGTTTGTCGCCGCACTCCTGTTCGAAGCAGGAAAGAAAGGTTTCGCGCTTTATATCACCATGTTCCCGTCATATCAGCTCATTTATGGTGTGCTGGCGGTGATCCCCATTCTCTTTGTTTGGGTCTACTGGACATGGTGTATCGTCTTGCTTGGCGCGGAAATTACTGTCACTCTCGGGGAATACCGCAAACTAAAACAAGCAGCTGAACAAGAAGAAGACGACGAACCATGA", - "dna_sequence_length": 873, - "functions": [ - "BrkB family putative transporter, inner membrane protein" - ], - "id": 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- ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6M4" - ] - ], - "dna_sequence": "ATGATTGCATTAATTCAACGCGTAACCCGTGCCAGCGTCACCGTGGAGGGAGAAGTGACGGGCGAAATTGGCGCGGGACTTTTGGTGTTATTGGGTGTCGAAAAGGATGACGACGAACAGAAAGCAAACCGTCTGTGCGAGCGTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCAGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACTATTTCGTCGAACGCTGCCGTCAGCAAGAGATGAACACGCAAACAGGACGCTTCGCTGCGGATATGCAGGTATCGCTGGTCAATGATGGCCCCGTGACATTCTGGTTGCAGGTATGA", - "dna_sequence_length": 438, - "functions": [ - "D-tyr-tRNA(Tyr) deacylase" - ], - "id": "CDS_3816", - "location": [ - [ - "NC_000913", - 4077015, - "+", - 438 - ] - ], - "md5": "8188a1b91116f09f0e74a7faff76de6c", - "parent_gene": "", - "protein_md5": "e0597917e9d119cfd9f41705c45f3e94", - "protein_translation": "MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRAEALYDYFVERCRQQEMNTQTGRFAADMQVSLVNDGPVTFWLQV", - "protein_translation_length": 145, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3859" - ], - [ - "gene_synonym", - "NP_418324.1" - ], - [ - "gene_synonym", - "EcoGene:EG11853" - ], - [ - "gene_synonym", - "GeneID:948387" - ], - [ - "gene_synonym", - "ASAP:ABE-0012692" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADQ2" - ], - [ - "gene_synonym", - "ECK3881" - ], - [ - "gene_synonym", - "yiiD" - ], - [ - "gene_synonym", - "GI:16131728" - ], - [ - "gene_synonym", - "b3888" - ] - ], - "dna_sequence": "ATGAGCCAGCTTCCAGGGTTGTCACGGGAAACAAGAGAGAGTATCGCTATGTATCACCTTCGGGTTCCACAAACAGAAGAAGAATTAGAGCGTTACTATCAGTTTCGCTGGGAAATGTTGCGTAAGCCCCTGCATCAACCAAAAGGTTCGGAACGCGACGCGTGGGATGCGATGGCGCATCACCAGATGGTCGTCGACGAGCAGGGTAATCTGGTGGCGGTAGGCCGACTGTATATTAATGCCGACAATGAAGCGTCCATTCGCTTTATGGCCGTTCATCCCGACGTGCAGGACAAAGGGTTAGGCACGCTGATGGCGATGACCCTGGAGTCGGTGGCGCGTCAGGAAGGCGTTAAGCGCGTGACCTGTAGCGCCCGTGAAGACGCGGTGGAGTTTTTCGCCAAGCTGGGGTTTGTTAATCAGGGAGAAATCACCACGCCAACCACCACGCCGATTCGCCATTTTTTGATGATTAAGCCCGTCGCCACTCTGGATGACATTCTGCATCGCGGCGACTGGTGCGCGCAGCTGCAACAGGCGTGGTACGAACATATCCCGCTTAGTGAAAAAATGGGCGTGCGCATTCAGCAATATACCGGGCAAAAATTTATCACTACCATGCCAGAAACCGGCAATCAGAATCCGCACCATACGCTGTTTGCCGGGAGTTTATTCTCACTGGCGACGCTCACTGGTTGGGGACTTATCTGGCTGATGCTGCGTGAACGCCACCTCGGCGGAACGATTATTCTTGCGGATGCGCATATCCGCTACAGCAAGCCGATTAGCGGTAAACCTCATGCGGTAGCCGACCTCGGTGCCTTAAGCGGCGATCTCGACCGTCTGGCGCGCGGACGAAAAGCACGGGTGCAGATGCAGGTCGAAATCTTTGGCGACGAGACGCCGGGTGCAGTGTTTGAAGGCACGTATATCGTTCTGCCCGCGAAGCCATTTGGCCCGTATGAAGAGGGCGGGAACGAAGAAGAGTAG", - 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"GI:145698336" - ], - [ - "gene_synonym", - "GeneID:948386" - ], - [ - "gene_synonym", - "NP_418325.3" - ], - [ - "gene_synonym", - "b3889" - ], - [ - "gene_synonym", - "JW5929" - ] - ], - "dna_sequence": "ATGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCTGAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTAGAGCAATATCTGGAACGTCAGCAATTCCCGGTGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAGGAATGA", - "dna_sequence_length": 213, - "functions": [ - "CopG family putative transcriptional regulator" - ], - "id": "CDS_3818", - "location": [ - [ - "NC_000913", - 4079297, - "+", - 213 - ] - ], - "md5": "dc202f0214af8ea0520102af428e287f", - "parent_gene": "", - "protein_md5": "447a4df39c936f98ab9973ec55c35d53", - "protein_translation": "MNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQKGEVVGVDDQCKEHKE", - "protein_translation_length": 70, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11855" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFU6" - ], - [ - "gene_synonym", - "GI:90111663" - ], - [ - "gene_synonym", - "GeneID:948385" - ], - [ - "gene_synonym", - "ECK3883" - ], - [ - "gene_synonym", - "yiiF" - ], - [ - "gene_synonym", - "ASAP:ABE-0012700" - ], - [ - "gene_synonym", - "b3890" - ], - [ - "gene_synonym", - "NP_418326.2" - ], - [ - "gene_synonym", - "JW5563" - ] - ], - "dna_sequence": "ATGGGCAGAATTTTACTCGATTTATCGAATGAGGTGATTAAGCAACTTGATGATCTCGAGGTGCAGCGTAATCTTCCTCGTGCGGACCTATTAAGGGAAGCGGTAGATCAATACCTGATAAATCAATCGCAAACAGCAAGAACCAGTGTTCCTGGCATCTGGCAAGGGTGTGAGGAAGATGGTGTCGAATATCAGCGTAAGCTGCGCGAGGAATGGTAA", - "dna_sequence_length": 219, - "functions": [ - "putative thymol sensitivity protein, CopG family putative transcriptional regulator" - ], - "id": "CDS_3819", - "location": [ - [ - "NC_000913", - 4079751, - "+", - 219 - ] - ], - "md5": "f95c197438d86d32d2e168780e679fa6", - "parent_gene": "", - "protein_md5": "313f4dd819e2ccf4f5568e43febdbc9e", - "protein_translation": 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"ATGAGTATTCGCATAATCCCGCAAGATGAGCTGGGTTCAAGCGAGAAACGTACGGCGGATATGATTCCGCCGTTATTGTTCCCTCGGCTCAAGAATTTATACAACCGCCGCGCCGAGCGTCTGCGCGAGCTGGCAGAAAATAATCCTCTGGGTGATTACCTGCGCTTTGCTGCGCTTATCGCCCACGCCCAGGAAGTGGTGCTGTACGACCATCCGCTGGAGATGGATCTGACTGCGCGCATTAAAGAAGCCAGCGCACAAGGCAAGCCCCCGCTGGATATTCACGTTCTGCCGCGTGATAAGCACTGGCAAAAGCTGCTGATGGCGCTGATTGCTGAGCTGAAACCTGAAATGAGCGGCCCGGCGCTGGCAGTGATTGAGAATCTGGAGAAGGCATCGACTCAGGAGCTGGAAGATATGGCCAGCGCGCTGTTTGCCTCTGATTTCTCGTCCGTCAGCAGCGATAAAGCGCCGTTTATCTGGGCTGCACTGTCGCTCTACTGGGCGCAGATGGCCAATCTGATCCCCGGCAAAGCCCGCGCTGAATACGGCGAGCAACGTCAATATTGCCCGGTTTGTGGTTCTATGCCGGTGTCCAGCATGGTGCAAATTGGCACCACTCAGGGGCTACGTTACCTGCACTGCAACCTGTGTGAAACTGAATGGCACGTAGTGCGCGTAAAATGCAGCAACTGCGAGCAGAGCGGCAAACTGCATTACTGGTCGCTGGATGACGAACAGGCCGCGATTAAAGCCGAAAGCTGCGATGACTGCGACACTTACCTGAAAATTCTCTATCAGGAAAAAGATCCAAAAATCGAAGCCGTAGCAGATGACCTCGCCTCTCTGGTACTGGACGCACGAATGGAGCAAGAAGGCTATGCCCGCAGTTCCATCAACCCGTTCCTGTTTCCGGGTGAAGGAGAGTAA", - "dna_sequence_length": 930, - "functions": [ - "formate dehydrogenase formation protein" - ], - "id": "CDS_3820", - "location": [ - [ - "NC_000913", - 4081228, - "-", - 930 - ] - ], - "md5": "9306e1f5af21fc224f3b9a1364abf6b5", - "parent_gene": "", - "protein_md5": "e14bec50261c6f00e21da4e69f9eee3b", - "protein_translation": "MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNLYNRRAERLRELAENNPLGDYLRFAALIAHAQEVVLYDHPLEMDLTARIKEASAQGKPPLDIHVLPRDKHWQKLLMALIAELKPEMSGPALAVIENLEKASTQELEDMASALFASDFSSVSSDKAPFIWAALSLYWAQMANLIPGKARAEYGEQRQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLCETEWHVVRVKCSNCEQSGKLHYWSLDDEQAAIKAESCDDCDTYLKILYQEKDPKIEAVADDLASLVLDARMEQEGYARSSINPFLFPGEGE", - "protein_translation_length": 309, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11856" - ], - [ - "gene_synonym", - "GI:16131732" - ], - [ - "gene_synonym", - "ECK3885" - ], - [ - "gene_synonym", - "fdoI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEL0" - ], - [ - "gene_synonym", - "GeneID:948383" - ], - [ - "gene_synonym", - "b3892" - ], - [ - "gene_synonym", - "ASAP:ABE-0012705" - ], - [ - "gene_synonym", - "JW3863" - ], - [ - "gene_synonym", - "NP_418328.1" - ] - ], - "dna_sequence": "ATGAAACGACGTGACACCATCGTGCGCTACACCGCGCCGGAACGTATCAACCACTGGATCACCGCCTTCTGCTTCATCCTGGCGGCGGTGAGCGGGCTGGGCTTTTTGTTCCCGTCCTTCAACTGGTTGATGCAAATCATGGGCACACCGCAGCTGGCGCGAATTCTGCACCCGTTTGTCGGCGTGGTTATGTTTGCCTCGTTCATCATCATGTTTTTCCGTTACTGGCATCACAACCTAATCAATCGGGATGATATCTTTTGGGCGAAGAATATTCGTAAGATCGTCGTCAACGAGGAAGTAGGTGACACCGGGCGTTATAACTTCGGTCAGAAATGCGTTTTCTGGGCGGCGATTATTTTCCTGGTTCTGCTGCTGGTGAGCGGCGTGATTATCTGGCGTCCTTATTTTGCGCCTGCTTTCTCAATCCCGGTGATCCGATTCGCGTTAATGCTGCATTCATTTGCCGCAGTGGCGTTAATTGTGGTTATCATGGTGCATATCTACGCCGCCCTTTGGGTGAAAGGCACGATTACCGCCATGGTGGAAGGATGGGTTACCAGCGCCTGGGCGAAGAAACATCACCCGCGCTGGTACCGTGAGGTCCGCAAGACAACGGAAAAGAAAGCTGAATGA", - "dna_sequence_length": 636, - "functions": [ - "formate dehydrogenase-O, cytochrome b556 subunit" - ], - "id": "CDS_3821", - "location": [ - [ - "NC_000913", - 4081860, - "-", - 636 - ] - ], - "md5": "90838caf8070bea2226dbb6383a94ca9", - "parent_gene": "", - "protein_md5": "ed29993cf859e7bc56aba9437df4de6f", - "protein_translation": "MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLMQIMGTPQLARILHPFVGVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVGDTGRYNFGQKCVFWAAIIFLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVALIVVIMVHIYAALWVKGTITAMVEGWVTSAWAKKHHPRWYREVRKTTEKKAE", - "protein_translation_length": 211, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3886" - ], - [ - "gene_synonym", - "GI:16131733" - ], - [ - "gene_synonym", - "fdoH" - ], - [ - "gene_synonym", - "GeneID:948395" - ], - [ - "gene_synonym", - "JW3864" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAJ5" - ], - [ - "gene_synonym", - "b3893" - ], - [ - "gene_synonym", - "EcoGene:EG11857" - ], - [ - "gene_synonym", - "ASAP:ABE-0012708" - ], - [ - "gene_synonym", - "NP_418329.1" - ] - ], - "dna_sequence": "ATGGCTTATCAATCTCAAGATATCATTCGTCGTTCCGCGACTAACGGTCTGACCCCCGCGCCTCAGGCGCGGGACTTCCAGGAAGAAGTGGCGAAACTCATCGACGTTACCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCAGAGTGGAACGACATTCGCGATACCGTCGGCAATAACATTGGGGTGTACGACAACCCCAATGATTTAAGCGCCAAATCGTGGACGGTAATGCGCTTCTCGGAAGTGGAGCAGAACGACAAACTGGAATGGCTGATCCGCAAAGACGGCTGTATGCACTGTTCCGATCCAGGCTGCCTGAAAGCGTGCCCGGCGGAAGGTGCAATTATTCAGTATGCCAACGGTATCGTCGACTTCCAGTCCGAGCAGTGCATTGGCTGCGGTTATTGCATTGCGGGCTGTCCGTTCGACATTCCGCGCCTCAACCCGGAAGACAACCGCGTCTACAAATGTACGCTGTGCGTTGACCGCGTGGTGGTTGGGCAAGAACCAGCCTGCGTGAAGACCTGCCCAACGGGCGCGATTCACTTCGGTACGAAAGAGTCGATGAAAACGCTGGCGAGCGAGCGCGTTGCTGAGCTGAAAACCCGCGGTTACGACAATGCGGGTCTGTACGATCCGGCAGGCGTCGGTGGTACACACGTCATGTACGTGCTGCACCATGCTGACAAGCCAAATCTGTATCATGGCTTGCCGGAGAACCCGGAAATCAGCGAAACCGTGAAATTCTGGAAAGGCATCTGGAAACCGCTCGCGGCTGTTGGCTTTGCGGCTACCTTTGCGGCCAGTATCTTCCACTACGTGGGTGTCGGTCCGAACCGTGCGGATGAGGAAGAGAATAATCTGCACGAAGAGAAAGACGAGGAGCGCAAATGA", - "dna_sequence_length": 903, - "functions": [ - "formate dehydrogenase-O, Fe-S subunit" - ], - "id": "CDS_3822", - "location": [ - [ - "NC_000913", - 4082759, - "-", - 903 - ] - ], - "md5": "d00b596a22cb8ec30f78528b5ea94727", - "parent_gene": "", - "protein_md5": "e5a904638cb9b4a8bcc407cc8b46856c", - "protein_translation": "MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKACQVACSEWNDIRDTVGNNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMHCSDPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPEDNRVYKCTLCVDRVVVGQEPACVKTCPTGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAGVGGTHVMYVLHHADKPNLYHGLPENPEISETVKFWKGIWKPLAAVGFAATFAASIFHYVGVGPNRADEEENNLHEEKDEERK", - "protein_translation_length": 300, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131734" - ], - [ - "gene_synonym", - "fdoG" - ], - [ - "gene_synonym", - "GeneID:948394" - ], - [ - "gene_synonym", - "ECK3887" - ], - [ - "gene_synonym", - "EcoGene:EG11858" - ], - [ - "gene_synonym", - "JW3865" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32176" - ], - [ - "gene_synonym", - "ASAP:ABE-0012710" - ], - [ - "gene_synonym", - "b3894" - ], - [ - "gene_synonym", - "NP_418330.1" - ] - ], - "dna_sequence": "ATGCAGGTCAGCAGAAGGCAGTTCTTTAAGATCTGCGCTGGCGGTATGGCAGGCACCACGGCAGCGGCACTGGGTTTTGCACCCAGCGTAGCACTCGCGGAAACCCGGCAGTATAAACTGCTGCGCACCCGCGAAACCCGTAATACCTGCACCTATTGTTCCGTAGGCTGTGGGCTGTTGATGTACAGCCTCGGTGACGGAGCAAAAAACGCCAAAGCATCTATCTTCCATATCGAAGGCGATCCGGATCACCCGGTCAACCGCGGTGCACTTTGTCCGAAAGGCGCTGGCCTGGTGGATTTCATCCACTCCGAAAGCCGTCTGAAGTTTCCGGAATACCGTGCGCCAGGTTCTGATAAATGGCAGCAAATCAGTTGGGAAGAGGCGTTTGATCGCATCGCCAAACTGATGAAAGAAGACCGCGATGCTAACTACATTGCGCAAAACGCCGAAGGCGTGACTGTTAACCGCTGGCTCTCCACCGGGATGCTGTGTGCTTCCGCGTCGAGTAACGAAACCGGCTATTTAACGCAAAAATTCTCCCGCGCGCTGGGTATGCTCGCGGTCGACAACCAGGCGCGTGTCTGACACGGACCAACGGTAGCAAGTCTTGCTCCAACATTTGGTCGCGGTGCGATGACCAACCACTGGGTCGACATCAAGAACGCCAACCTCGTCGTGGTGATGGGCGGTAACGCCGCTGAAGCTCACCCGGTCGGGTTCCGCTGGGCGATGGAAGCCAAAATTCACAACGGCGCGAAGCTGATTGTGATCGATCCTCGCTTTACGCGTACGGCGGCGGTAGCTGACTACTATGCCCCTATTCGTTCCGGTACTGACATTGCTTTCCTGTCAGGCGTATTGCTGTACCTGCTGAACAATGAAAAATTCAACCGCGAATACACCGAAGCCTATACCAACGCCAGCCTGATCGTGCGTGAGGATTACGGCTTTGAAGATGGCCTGTTCACCGGCTACGACGCGGAAAAACGCAAGTACGATAAATCCTCCTGGACTTATGAACTGGACGAAAACGGCTTCGCCAAACGCGATACCACGCTGCAACATCCGCGCTGCGTGTGGAACTTGCTGAAACAGCACGTTTCCCGCTACACGCCAGATGTGGTTGAAAACATCTGTGGTACGCCAAAAGACGCGTTCCTGAAAGTCTGCGAATACATCGCAGAAACCAGTGCTCACGATAAAACTGCCTCGTTCCTGTATGCCCTCGGCTGGACGCAACACTCCGTTGGTGCGCAAAACATTCGTACGATGGCGATGATCCAGCTGCTGCTCGGCAATATGGGGATGGCAGGCGGCGGCGTTAACGCCCTGCGCGGTCACTCCAATATTCAGGGGCTGACGGACCTGGGGCTGCTGTCGCAGAGCCTGCCAGGTTACATGACGCTGCCAAGCGAGAAGCAGACCGATCTGCAAACCTACCTTACCGCCAACACGCCAAAACCGCTGCTGGAAGGCCAGGTAAACTACTGGGGCAACTACCCGAAATTCTTCGTCTCTATGATGAAGGCCTTCTTTGGTGATAAAGCGACGGCGGAAAATAGCTGGGGCTTTGACTGGTTGCCGAAGTGGGATAAAGGCTACGACGTCCTGCAATACTTCGAGATGATGAAAGAGGGCAAGGTCAATGGCTATATCTGCCAGGGCTTTAACCCTGTTGCCTCATTCCCGAACAAAAACAAAGTGATCGGTTGTCTGTCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTAACTTCTGGCAGAACCACGGTGAGCTGAACGAAGTTGACTCGTCGAAGATCCAGACCGAAGTGTTCCGTCTGCCATCGACCTGCTTCGCGGAAGAGAACGGTTCTATCGTTAACTCAGGTCGCTGGTTACAGTGGCACTGGAAAGGTGCGGACGCCCCGGGGATTGCGCTGACTGACGGCGAGATCCTCTCCGGTATCTTCCTGCGCTTGCGCAAGATGTATGCCGAACAGGGTGGCGCGAACCCGGACCAGGTGCTGAACATGACATGGAACTACGCCATTCCGCATGAGCCATCTTCAGAAGAAGTGGCGATGGAGAGCAACGGTAAGGCGCTGGCCGATATTACCGATCCGGCAACCGGTGCGGTTATCGTCAAGAAAGGCCAACAACTTAGTTCGTTCGCCCAATTGCGCGATGACGGTACAACCTCCTGTGGCTGCTGGATTTTCGCCGGTAGCTGGACGCCGGAAGGCAACCAGATGGCACGCCGTGATAACGCCGATCCGTCTGGCCTCGGTAACACGCTGGGCTGGGCATGGGCATGGCCGCTTAACCGCCGCATTCTGTATAACCGCGCCTCCGCAGATCCGCAGGGTAACCCGTGGGATCCGAAGCGTCAGTTGCTGAAATGGGACGGCACTAAGTGGACCGGCTGGGATATTCCGGACTACAGCGCAGCGCCTCCGGGTAGCGGCGTCGGGCCGTTTATCATGCAGCAGGAAGGCATGGGGCGTCTGTTTGCCCTCGATAAGATGGCGGAAGGTCCGTTCCCGGAACACTACGAGCCGTTTGAAACGCCGCTGGGAACTAACCCGCTGCATCCAAACGTTATCTCGAACCCGGCTGCACGTATCTTTAAAGACGACGCCGAAGCATTGGGTAAAGCCGATAAGTTCCCGTATGTCGGAACCACCTATCGTCTGACCGAGCACTTCCACTACTGGACCAAACACGCGCTGTTGAACGCGATTTTGCAGCCAGAGCAGTTTGTGGAAATCGGGGAGTCGCTGGCGAATAAACTTGGCATTGCCCAGGGCGATACCGTGAAAGTCTCCTCCAACCGTGGCTATATCAAAGCCAAAGCGGTGGTGACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCGATTCACTGGGGCTATGAAGGCGTAGCTAAAAAAGGCTTTATTGCCAATACTTTAACGCCATTCGTTGGTGATGCGAACACGCAGACGCCGGAGTTTAAGTCCTTCCTTGTGAATGTGGAAAAGGTGTAA", - "dna_sequence_length": 3051, - "functions": [ - "formate dehydrogenase-O, large subunit" - ], - "id": "CDS_3823", - "location": [ - [ - "NC_000913", - 4085822, - "-", - 3051 - ] - ], - "md5": "c06b1c52c01456f7c7720fe44a9e539d", - "parent_gene": "", - "protein_md5": "6d7d7dac1a071da94f40bc7219025c02", - "protein_translation": "MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTRETRNTCTYCSVGCGLLMYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKFPEYRAPGSDKWQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLSTGMLCASASSNETGYLTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWVDIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVADYYAPIRSGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRKYDKSSWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCEYIAETSAHDKTASFLYALGWTQHSVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSMMKAFFGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKEGKVNGYICQGFNPVASFPNKNKVIGCLSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENGSIVNSGRWLQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNYAIPHEPSSEEVAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIFAGSWTPEGNQMARRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQLLKWDGTKWTGWDIPDYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFETPLGTNPLHPNVISNPAARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAILQPEQFVEIGESLANKLGIAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIGIPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV", - "protein_translation_length": 1016, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131735" - ], - [ - "gene_synonym", - "GeneID:948393" - ], - [ - "gene_synonym", - "ECK3888" - ], - [ - "gene_synonym", - "ASAP:ABE-0012714" - ], - [ - "gene_synonym", - "EcoGene:EG11859" - ], - [ - "gene_synonym", - "JW3866" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32177" - ], - [ - "gene_synonym", - "b3895" - ], - [ - "gene_synonym", - "NP_418331.1" - ], - [ - "gene_synonym", - "fdhD" - ] - ], - "dna_sequence": "GTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCATGTGGTGATGATGGCGTCGCCCAAAGACCTTGAGTACTTTGCGCTCGGTTTTTCGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTGTAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGAGCAACTTAATGACATCGGAAAACCGGTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAACTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGCGCTGGACAAACTGTTAGGCCGCCGGTCACAAGAAGGGGAAAGCTGGCAGCAAGGTGCGGTACTGGTTTCCAGTCGTGCCAGTTATGAAATGGTGCAAAAGTCGGCGATGTGCGGCGTAGAGATTTTGTTTGCGGTGTCTGCCGCGACCACGCTTGCTGTAGAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAA", - "dna_sequence_length": 834, - "functions": [ - "formate dehydrogenase formation protein" - ], - "id": "CDS_3824", - "location": [ - [ - "NC_000913", - 4086016, - "+", - 834 - ] - ], - "md5": "408be9c2bb29844fd02503000c9a2835", - "parent_gene": "", - "protein_md5": "32d6e505ebd2fa165e69c0a2e20b64be", - "protein_translation": "MKKTQRKEIENVTNITGVRQIELWRRDDLQHPRLDEVAEEVPVALVYNGISHVVMMASPKDLEYFALGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSSRRFMGLKERRRALAGRTGCGVCGVEQLNDIGKPVQPLPFTQTFDLNKLDDALRHLNDFQPVGQLTGCTHAAAWMLPSGELVGGHEDVGRHVALDKLLGRRSQEGESWQQGAVLVSSRASYEMVQKSAMCGVEILFAVSAATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLSN", - "protein_translation_length": 277, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11860" - ], - [ - "gene_synonym", - "GI:16131736" - ], - [ - "gene_synonym", - "ECK3889" - ], - [ - "gene_synonym", - "GeneID:948392" - ], - [ - "gene_synonym", - "yiiG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32151" - ], - [ - "gene_synonym", - "JW3867" - ], - [ - "gene_synonym", - "b3896" - ], - [ - "gene_synonym", - "NP_418332.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012718" - ] - ], - "dna_sequence": "ATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGTCTGACGGGTTGTGATGATAAAAAAGCCGAAACAGAAACGCTCCCGCCTGCCAATAGTCAACCTGCCGCACCAGCTCCTGAAGCGAAACCTACTGAAGCTCCCGTTGCAAAAGCAGAAGCTAAACCTGAAACACCTGCGCAACCGGTGGTCGATGAACAAGCGGTTTTCGACGAAAAAATGGATGTCTATATCAAGTGCTACAACAAGTTACAGATCCCGGTACAGCGCAGTCTGGCGCGTTATGCTGACTGGCTGAAAGATTTTAAACAGGGGCCTACCGGTGAAGAGCGTACTGTTTATGGCATCTACGGCATTAGTGAATCCAACCTCGCTGAGTGTGAAAAAGGCGTAAAAAGTGCTGTGGCGTTAACGCCTGCGCTGCAACCAATTGATGGCGTGGCGGTGAGTTATATCGATGCTGCCGTGGCGTTGGGTAATACCATTAACGAAATGGATAAATATTACACCCAGGAAAATTATAAAGACGATGCGTTTGCGAAAGGGAAAACGCTGCACCAGACATTCTTAAAAAATCTGGAAGCCTTTGAACCTGTAGCCGAATCTTATCATGCGGCGATTCAGGAAATTAATGATAAGCGTCAGCTTGCGGAACTGAAAAATATTGAAGAAAGAGAAGGGAAAACATTCCACTACTACTCTCTGGCAGTCATGATTTCAGCGAAACAAATTAATAACCTGATATCGCAAGATAAGTTTGATGCAGAAGCGGCAATGAAGAAAGTGTCTGAACTGGAAACGCTAGTGGCGCAGGCCAAAGAAGCGGATAAAGGCGGCATGAATTTCTCGTTTATTAATTCGGCAGGCCAGTATCAACTCGAGGCTAAAAAATACGTTCGCCGCATCAGAGATAAAGTCCCGTACTCTGACTGGGATAAAGAGCAACTTCAGGACGCAAACTCAAGCTGGATGGTCGAAGACTCTTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAA", - "dna_sequence_length": 1056, - "functions": [ - "DUF3829 family lipoprotein" - ], - "id": "CDS_3825", - "location": [ - [ - "NC_000913", - 4087002, - "+", - 1056 - ] - ], - "md5": "1935a4087a5638a901846bdb9447f3e9", - "parent_gene": "", - "protein_md5": "bca2e9e0d6165326dffaadbf8f70637f", - "protein_translation": "MKRNLLSSAIIVAIMSLGLTGCDDKKAETETLPPANSQPAAPAPEAKPTEAPVAKAEAKPETPAQPVVDEQAVFDEKMDVYIKCYNKLQIPVQRSLARYADWLKDFKQGPTGEERTVYGIYGISESNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNTINEMDKYYTQENYKDDAFAKGKTLHQTFLKNLEAFEPVAESYHAAIQEINDKRQLAELKNIEEREGKTFHYYSLAVMISAKQINNLISQDKFDAEAAMKKVSELETLVAQAKEADKGGMNFSFINSAGQYQLEAKKYVRRIRDKVPYSDWDKEQLQDANSSWMVEDSFPRALREYNEMVDDYNSLR", - "protein_translation_length": 351, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11861" - ], - [ - "gene_synonym", - "yiiH" - ], - [ - "gene_synonym", - "GI:16131737" - ], - [ - "gene_synonym", - "NP_418333.1" - ], - [ - "gene_synonym", - "GeneID:948389" - ], - [ - "gene_synonym", - "ECK3890" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32152" - ], - [ - "gene_synonym", - "frvR" - ], - [ - "gene_synonym", - "b3897" - ], - [ - "gene_synonym", - "JW3868" - ], - [ - "gene_synonym", - "ASAP:ABE-0012720" - ] - ], - "dna_sequence": "ATGCTAAACGAACGCCAGTTAAAGATTGTCGATCTGCTGGAGCAACAGCCGCGCACGCCTGGCGAGCTGGCGCAACAGACTGGCGTTTCAGGCAGGACCATCCTGCGTGATATTGACTATCTCAACTTCACCCTTAACGGCAAAGCCCGCATTTTCGCCAGTGGCAGTGCGGGCTATCAGCTGGAAATCTTCGAGCGCCGCAGCTTTTTTCAGTTGCTGCAAAAGCACGATAACGACGATCGGCTGCTGGCGCTGTTATTACTGAATACTTTCACTCCCCGTGCGCAACTCGCCTCGGCGCTTAATTTGCCAGAAACGTGGGTAGCAGAGCGTCTGCCCCGGTTAAAACAGCGTTATGAACGCACTTGTTGCCTGGCCAGCCGCCCTGGTTTGGGCCATTTCATTGATGAGACAGAAGAGAAACGCGTTATCTTGCTGGCGAACTTGCTGCGCAAAGATCCGTTTTTAATTCCGCTGGCGGGCATAACACGAGACAACCTTCAGCATTTATCCACGGCCTGCGACAACCAACACCGCTGGCCGCTCATGCAGGGTGATTATCTCTCCAGCCTGATTCTGGCGATTTACGCCCTGCGTAATCAACTGACCGATGAGTGGCCGCAATATCCCGGTGACGAGATAAAACAAATCGTTGAACATAGCGGTCTGTTTCTTGGTGATAACGCTGTAAGAACCCTGACGGGTTTGATAGAGAAACAGCATCAGCAAGCGCAGGTAATTTCAGCCGATAATGTGCAGGGGTTGCTGCAAAGGGTGCCGGGCATCGCGTCATTGAATATTATTGATGCGCAGCTGGTTGAGAATATTACCGGGCATTTATTACGTTGCCTTGCCGCACCAGTGTGGATTGCTGAGCACCGCCAGAGCAGCATGAATAACCTGAAAGCCGCCTGGCCTGCGGCCTTTGATATGAGTCTGCACTTTATTACGCTACTGCGTGAACAGCTCGATATTCCCCTTTTCGACAGCGATCTGATCGGTTTGTATTTTGCCTGTGCGCTGGAGCGGCATCAAAACGAACGCCAGCCGATCATTTTGCTCTCGGACCAGAACGCGATTGCCACTATTAATCAGCTCGCCATTGAGCGCGATGTTTTAAATTGTCGGGTAATTATTGCCCGTAGCTTAAGCGAACTTGTTGCCATTCGCGAAGAGATTGAGCCGTTATTGATCATTAACAACAGCCATTATTTACTGGATGACGCGGTAAATAATTACATCACCGTAAAAAATATCATTACGGCTGCCGGTATCGAACAAATAAAACATTTTCTGGCGACGGCATTTATTCGCCAACAGCCGGAGCGTTTTTTCTCTGCCCCCGGAAGTTTTCATTATTCGAATGTACGCGGTGAAAGCTGGCAACATATTACCCGGCAAATTTGTGCGCAATTAGTCGCACAACACCATATTACCGCCGATGAAGCACAACGCATCATCGCCCGCGAAGGCGAAGGTGAAAACCTGATTGTTAATCGCCTCGCCATCCCACATTGCTGGAGCGAACAGGAGCGACGTTTTCGTGGATTTTTTATTACCCTCGCCCAACCAGTTGAGGTGAATAACGAAGTCATTAACCATGTCTTGATCGCCTGCGCCGCCGCCGATGCGCGTCATGAGCTAAAAATATTTAGCTATCTGGCAAGCATATTGTGTCAGCATCCGGCGGAGATTATTGCCGGGTTAACAGGATATGAGGCATTTATGGAGTTACTTCACAAGGGGTGA", - "dna_sequence_length": 1749, - "functions": [ - "putative frv operon regulator", - "contains a PTS EIIA domain" - ], - "id": "CDS_3826", - "location": [ - [ - "NC_000913", - 4089855, - "-", - 1749 - ] - ], - "md5": "c01510c22c0238826206a2705e2d1830", - "parent_gene": "", - "protein_md5": "09b9af6f98f5885a2d95d0a7cb0e2ea8", - "protein_translation": "MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG", - "protein_translation_length": 582, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yiiI" - ], - [ - "gene_synonym", - "EcoGene:EG11862" - ], - [ - "gene_synonym", - "GeneID:948388" - ], - [ - "gene_synonym", - "ECK3891" - ], - [ - "gene_synonym", - "GI:16131738" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32153" - ], - [ - "gene_synonym", - "ASAP:ABE-0012722" - ], - [ - "gene_synonym", - "NP_418334.1" - ], - [ - "gene_synonym", - "b3898" - ], - [ - "gene_synonym", - "JW3869" - ], - [ - "gene_synonym", - "frvX" - ] - ], - "dna_sequence": "ATGAACATTGAGTTACTGCAACAGTTGTGCGAAGCCAGCGCCGTCAGCGGCGATGAACAGGAAGTTCGCGACATTCTGATAAACACGCTGGAACCTTGCGTGAATGAAATCACCTTCGATGGTCTGGGCAGCTTTGTTGCCCGTAAGGGGAATAAAGGTCCAAAAGTTGCCGTTGTCGGACATATGGATGAAGTCGGCTTTATGGTCACCCACATCGACGAGAGCGGTTTTCTGCGTTTTACCACCATTGGCGGCTGGTGGAATCAGTCGATGCTCAACCACCGGGTAACCATACGCACACACAAGGGAGTGAAAATCCCTGGTGTGATTGGTTCCGTCGCGCCTCATGCGTTAACGGAAAAGCAAAAGCAACAACCGCTGTCATTTGATGAGATGTTCATTGATATTGGCGCGAACAGTCGCGAAGAGGTGGAAAAGCGCGGCGTGGAAATTGGTAATTTTATTAGCCCGGAAGCCAATTTTGCCTGCTGGGGCGAAGATAAAGTGGTCGGCAAGGCGTTGGATAACCGCATCGGCTGCGCAATGATGGCTGAACTATTGCAGACGGTGAATAATCCCGAAATTACGCTGTATGGCGTTGGCAGTGTGGAAGAAGAAGTTGGGCTACGCGGGGCGCAAACCTCGGCGGAACACATTAAACCGGACGTCGTGATCGTGTTGGATACCGCCGTAGCGGGCGATGTTCCGGGCATTGATAACATTAAATACCCGCTGAAACTGGGCCAGGGGCCGGGGCTGATGCTGTTTGACAAGCGCTACTTCCCCAACCAGAAACTGGTAGCAGCGTTAAAAAGCTGTGCCGCACATAACGATTTACCGCTGCAATTTTCCACCATGAAAACCGGTGCGACGGATGGCGGGCGCTACAACGTGATGGGCGGCGGGCGTCCGGTTGTCGCGCTGTGTCTGCCAACTCGTTATCTGCACGCCAACAGCGGTATGATTTCAAAAGCCGATTACGAAGCTCTGCTCACGCTGATACGGGGTTTTCTGACGACCTTAACTGCGGAGAAAGTCAACGCGTTTAGCCAGTTCCGTCAGGTGGATTAA", - "dna_sequence_length": 1071, - "functions": [ - "putative peptidase" - ], - "id": "CDS_3827", - "location": [ - [ - "NC_000913", - 4090925, - "-", - 1071 - ] - ], - "md5": "564952f275e530b54430a6e5bc93f5c0", - "parent_gene": "", - "protein_md5": "f373348029ab4c9c94d3db5dd51e05ed", - "protein_translation": "MNIELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFDGLGSFVARKGNKGPKVAVVGHMDEVGFMVTHIDESGFLRFTTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGNFISPEANFACWGEDKVVGKALDNRIGCAMMAELLQTVNNPEITLYGVGSVEEEVGLRGAQTSAEHIKPDVVIVLDTAVAGDVPGIDNIKYPLKLGQGPGLMLFDKRYFPNQKLVAALKSCAAHNDLPLQFSTMKTGATDGGRYNVMGGGRPVVALCLPTRYLHANSGMISKADYEALLTLIRGFLTTLTAEKVNAFSQFRQVD", - "protein_translation_length": 356, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11863" - ], - [ - "gene_synonym", - "yiiJ" - ], - [ - "gene_synonym", - "frvB" - ], - [ - "gene_synonym", - "ECK3892" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32154" - ], - [ - "gene_synonym", - "GI:90111664" - ], - [ - "gene_synonym", - "GeneID:948390" - ], - [ - "gene_synonym", - "ASAP:ABE-0012725" - ], - [ - "gene_synonym", - "JW5562" - ], - [ - "gene_synonym", - "NP_418335.4" - ], - [ - "gene_synonym", - "b3899" - ] - ], - "dna_sequence": "ATGGAGTCATCCTTACGTATTGTCGCGATCACCAACTGCCCCGCCGGGATCGCTCACACCTACATGGTGGCGGAAGCCCTGGAACAGAAAGCCCGTTCTCTCGGTCATACCATAAAAGTGGAAACTCAAGGGTCCAGTGGCGTTGAAAACCGCTTATCCAGCGAAGAGATTGCCGCTGCCGATTACGTCATTCTCGCTACCGGGCGTGGCCTGAGCGGTGATGATCGCGCGCGGTTTGCCGGGAAGAAAGTTTATGAGATTGCCATCTCCCAGGCGTTGAAAAATATCGACCAGATTTTCAGCGAATTACCGACAAACTCGCAGCTTTTTGCCGCAGATAGCGGCGTGAAGCTTGGCAAACAGGAAGTGCAAAGCGGTAGCGTGATGAGCCACCTGATGGCGGGCGTCTCTGCGGCGCTGCCGTTTGTCATCGGCGGTGGTATCCTGGTGGCGCTTGCCAACATGCTGGTGCAGTTCGGTTTGCCGTATACCGATATGTCGAAAGGCGCGCCGTCGTTTACCTGGGTAGTTGAATCCATCGGTTACCTTGGCTTCACCTTTATGATCCCCATCATGGGCGCTTATATTGCCTCGTCGATTGCCGATAAACCGGCTTTCGCTCCGGCGTTTCTGGTTTGCTATCTGGCGAACGACAAAGCGCTGCTCGGCACCCAGTCGGGTGCGGGATTCCTCGGCGCGGTGGTGCTGGGGCTGGCGATTGGCTATTTCGTCTTCTGGTTCCGCAAAGTGCGCCTTGGCAAAGCATTACAACCGCTGCTCGGTTCAATGCTGATCCCGTTCGTTACTCTGCTGGTTTTCGGCGTGCTCACTTACTACGTTATCGGGCCGGTGATGTCCGACCTCATGGGCGGGCTGCTCCACTTCCTGAATACCATTCCTCCATCAATGAAGTTTGCGGCAGCGTTTCTGGTCGGTGCGATGCTGGCGTTCGATATGGGCGGCCCCATCAATAAAACCGCCTGGTTCTTCTGCTTCTCACTGCTGGAAAAACACATTTATGACTGGTACGCCATCGTCGGCGTTGTCGCGCTGATGCCGCCCGTCGCGGCGGGTCTTGCGACGTTCATTGCGCCCAAACTGTTTACCCGACAGGAAAAAGAGGCTGCCAGTAGTGCCATTGTGGTCGGTGCCACAGTCGCAACCGAACCGGCTATTCCTTACGCTCTGGCAGCTCCGTTGCCGATGATTACCGCCAATACGCTGGCGGGCGGCATTACCGGCGTGCTGGTGATCGCTTTCGGAATCAAACGTCTGGCACCTGGTTTGGGTATCTTTGACCCGCTGATCGGCCTGATGTCGCCGGTGGGTTCGTTTTATCTGGTGCTGGCGATTGGCCTCGCGCTGAACATTTCATTCATTATCGTCCTGAAAGGATTGTGGTTACGCCGCAAAGCGAAAGCCGCGCAACAGGAGCTTGTCCATGAACATTGA", - "dna_sequence_length": 1452, - "functions": [ - "putative PTS enzyme, IIB component/IIC component" - ], - "id": "CDS_3828", - "location": [ - [ - "NC_000913", - 4092366, - "-", - 1452 - ] - ], - "md5": "f956f5d32cfda20ea1aa36294efbad52", - "parent_gene": "", - "protein_md5": "2c163ba489b2be2474a547fc2c98b4ae", - "protein_translation": "MESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQGSSGVENRLSSEEIAAADYVILATGRGLSGDDRARFAGKKVYEIAISQALKNIDQIFSELPTNSQLFAADSGVKLGKQEVQSGSVMSHLMAGVSAALPFVIGGGILVALANMLVQFGLPYTDMSKGAPSFTWVVESIGYLGFTFMIPIMGAYIASSIADKPAFAPAFLVCYLANDKALLGTQSGAGFLGAVVLGLAIGYFVFWFRKVRLGKALQPLLGSMLIPFVTLLVFGVLTYYVIGPVMSDLMGGLLHFLNTIPPSMKFAAAFLVGAMLAFDMGGPINKTAWFFCFSLLEKHIYDWYAIVGVVALMPPVAAGLATFIAPKLFTRQEKEAASSAIVVGATVATEPAIPYALAAPLPMITANTLAGGITGVLVIAFGIKRLAPGLGIFDPLIGLMSPVGSFYLVLAIGLALNISFIIVLKGLWLRRKAKAAQQELVHEH", - "protein_translation_length": 483, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yiiK" - ], - [ - "gene_synonym", - "NP_418336.1" - ], - [ - "gene_synonym", - "EcoGene:EG11864" - ], - [ - "gene_synonym", - "frvA" - ], - [ - "gene_synonym", - "ECK3893" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32155" - ], - [ - "gene_synonym", - "ASAP:ABE-0012727" - ], - [ - "gene_synonym", - "JW3871" - ], - [ - "gene_synonym", - "b3900" - ], - [ - "gene_synonym", - "GeneID:948391" - ], - [ - "gene_synonym", - "GI:16131740" - ] - ], - "dna_sequence": "ATGGCAGCTCTTACTGCAAGCTGTATTGACCTGAATATTCAGGGCAATGGCGCTTATTCCGTTCTGAAGCAGTTGGCGACAATAGCGTTACAAAACGGTTTTATCACCGACTCACACCAGTTCCTGCAAACCCTGCTGCTGCGCGAAAAAATGCACTCTACTGGATTTGGTTCCGGTGTCGCCGTGCCGCACGGTAAAAGCGCCTGCGTTAAACAACCGTTCGTATTATTCGCCCGCAAAGCGCAGGCTATTGACTGGAAAGCCAGCGATGGCGAAGACGTCAATTGCTGGATCTGCCTCGGCGTGCCGCAAAGCGGCGAAGAGGATCAGGTCAAAATCATCGGCACACTGTGTCGCAAAATTATTCACAAGGAATTTATTCATCAACTGCAACAGGGCGATACCGACCAGGTGCTTGCCTTGTTAAATCAAACCCTCAGCTCATAA", - "dna_sequence_length": 447, - "functions": [ - "putative enzyme IIA component of PTS" - ], - "id": "CDS_3829", - "location": [ - [ - "NC_000913", - 4092823, - "-", - 447 - ] - ], - "md5": "a5e58f8d466cd41e7a80543623bcbab8", - "parent_gene": "", - "protein_md5": "c0e068ab23a6c7d07365f41705a9471c", - "protein_translation": "MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQTLLLREKMHSTGFGSGVAVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICLGVPQSGEEDQVKIIGTLCRKIIHKEFIHQLQQGDTDQVLALLNQTLSS", - "protein_translation_length": 148, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418337.1" - ], - [ - "gene_synonym", - "EcoGene:EG11865" - ], - [ - "gene_synonym", - "yiiL" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32156" - ], - [ - "gene_synonym", - "ECK3894" - ], - [ - "gene_synonym", - "JW3872" - ], - [ - "gene_synonym", - "b3901" - ], - [ - "gene_synonym", - "rhaM" - ], - [ - "gene_synonym", - "GeneID:948402" - ], - [ - "gene_synonym", - "GI:16131741" - ], - [ - "gene_synonym", - "ASAP:ABE-0012729" - ] - ], - "dna_sequence": "ATGATCCGCAAAGCCTTTGTCATGCAGGTAAACCCCGACGCCCACGAAGAGTATCAGCGTCGGCATAATCCCATCTGGCCAGAACTGGAAGCAGTGCTGAAATCTCACGGTGCGCATAACTACGCCATCTATCTCGACAAAGCGCGTAATCTGCTGTTTGCCATGGTAGAGATTGAATCTGAAGAACGCTGGAATGCGGTTGCCAGCACTGATGTTTGCCAACGTTGGTGGAAATATATGACCGATGTTATGCCCGCTAACCCGGATAACAGCCCGGTGAGTAGCGAGCTGCAAGAAGTGTTTTACCTGCCGTAA", - "dna_sequence_length": 315, - "functions": [ - "L-rhamnose mutarotase" - ], - "id": "CDS_3830", - "location": [ - [ - "NC_000913", - 4093438, - "-", - 315 - ] - ], - "md5": "79e0d4fb3301dc60cb8742003e1545f0", - "parent_gene": "", - "protein_md5": "57a2292d55fc3b2bb2b01c9726349348", - "protein_translation": "MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP", - "protein_translation_length": 104, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418338.1" - ], - [ - "gene_synonym", - "b3902" - ], - [ - "gene_synonym", - "EcoGene:EG11866" - ], - [ - "gene_synonym", - "ECK3895" - ], - [ - "gene_synonym", - "JW3873" - ], - [ - "gene_synonym", - "rhaD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32169" - ], - [ - "gene_synonym", - "ASAP:ABE-0012731" - ], - [ - "gene_synonym", - "GeneID:948401" - ], - [ - "gene_synonym", - "GI:16131742" - ] - ], - "dna_sequence": "ATGCAAAACATTACTCAGTCCTGGTTTGTCCAGGGAATGATCAAAGCCACCACCGACGCCTGGCTGAAAGGCTGGGATGAGCGCAACGGCGGCAACCTGACGCTACGCCTGGATGACGCCGATATCGCACCATATCACGACAATTTCCACCAACAACCGCGCTATATCCCGCTCAGCCAGCCCATGCCTTTACTGGCAAATACACCGTTTATTGTCACCGGCTCGGGCAAATTCTTCCGTAACGTCCAGCTTGATCCTGCGGCTAACTTAGGCATCGTAAAAGTCGACAGCGACGGCGCGGGCTACCACATTCTTTGGGGGTTAACCAACGAAGCCGTCCCCACTTCCGAACTTCCGGCTCACTTCCTTTCCCACTGCGAGCGCATTAAAGCCACCAACGGCAAAGATCGGGTGATCATGCACTGCCACGCCACCAACCTGATCGCCCTCACCTATGTACTTGAAAACGACACCGCGGTCTTCACTCGCCAACTGTGGGAAGGCAGCACCGAGTGTCTGGTGGTATTCCCGGATGGCGTTGGCATTTTGCCGTGGATGGTGCCCGGCACGGACGAAATCGGCCAGGCGACCGCACAAGAGATGCAAAAACATTCGCTGGTGTTGTGGCCCTTCCACGGCGTCTTCGGCAGCGGACCGACGCTGGATGAAACCTTCGGTTTAATCGACACCGCAGAAAAATCAGCACAAGTATTAGTGAAGGTTTATTCGATGGGCGGCATGAAACAGACCATCAGCCGTGAAGAGTTGATAGCGCTCGGCAAGCGTTTCGGCGTTACGCCACTCGCCAGTGCGCTGGCGCTGTAA", - "dna_sequence_length": 825, - "functions": [ - "rhamnulose-1-phosphate aldolase" - ], - "id": "CDS_3831", - "location": [ - [ - "NC_000913", - 4094272, - "-", - 825 - ] - ], - "md5": "a9b6323eb7defa8a951c861ed0216a50", - "parent_gene": "", - "protein_md5": "0fbb4e4327a0778f49df12c491039489", - "protein_translation": "MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGIVKVDSDGAGYHILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAVFTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL", - "protein_translation_length": 274, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:49176441" - ], - [ - "gene_synonym", - "EcoGene:EG11867" - ], - [ - "gene_synonym", - "ECK3896" - ], - [ - "gene_synonym", - "b3903" - ], - [ - "gene_synonym", - "rhaA" - ], - [ - "gene_synonym", - "JW5561" - ], - [ - "gene_synonym", - "GeneID:948400" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32170" - ], - [ - "gene_synonym", - "YP_026276.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012736" - ] - ], - "dna_sequence": "ATGACCACTCAACTGGAACAGGCCTGGGAGCTAGCGAAACAGCGTTTCGCGGCGGTGGGGATTGATGTCGAGGAGGCGCTGCGCCAACTTGATCGTTTACCCGTTTCAATGCACTGCTGGCAGGGCGATGATGTTTCCGGTTTTGAAAACCCGGAAGGTTCGCTGACCGGGGGGATTCAGGCCACAGGCAATTATCCGGGCAAAGCGCGTAATGCCAGTGAGCTACGTGCCGATCTGGAACAGGCTATGCGGCTGATTCCGGGGCCGAAACGGCTTAATTTACATGCCATCTATCTGGAATCAGATACGCCAGTCTCGCGCGACCAGATCAAACCAGAGCACTTCAAAAACTGGGTTGAATGGGCGAAAGCCAATCAGCTCGGTCTGGATTTTAACCCCTCCTGCTTTTCGCATCCGCTAAGCGCCGATGGCTTTACGCTTTCCCATGCCGACGACAGCATTCGCCAGTTCTGGATTGATCACTGCAAAGCCAGCCGTCGCGTTTCGGCCTATTTTGGCGAGCAACTCGGCACACCATCGGTGATGAACATCTGGATCCCGGATGGTATGAAAGATATCACCGTTGACCGTCTCGCCCCGCGTCAGCGTCTGCTGGCAGCACTGGATGAGGTGATCAGCGAGAAGCTAAACCCTGCGCACCATATCGACGCCGTTGAGAGCAAATTGTTTGGCATTGGCGCAGAGAGCTACACGGTTGGCTCCAATGAGTTTTACATGGGGTATGCCACCAGCCGCCAGACTGCGCTGTGCCTGGACGCCGGGCACTTCCACCCGACTGAAGTGATTTCCGACAAGATTTCCGCCGCCATGCTGTATGTGCCGCAGTTGCTGCTGCACGTCAGCCGTCCGGTTCGCTGGGACAGCGATCACGTAGTGCTGCTGGATGATGAAACCCAGGCAATTGCCAGTGAGATTGTGCGTCACGATCTGTTTGACCGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAACGTCACGATACGCCAGCAGGTAGCGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTGAGTCGCCGCGGGTAA", - "dna_sequence_length": 1260, - "functions": [ - "L-rhamnose isomerase" - ], - "id": "CDS_3832", - "location": [ - [ - "NC_000913", - 4095982, - "-", - 1260 - ] - ], - "md5": "caadc48affb4415a67c665d12a9bee35", - "parent_gene": "", - "protein_md5": "4da7bdbc2f96924f4a0bb1d28c4e1eb6", - "protein_translation": "MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDDVSGFENPEGSLTGGIQATGNYPGKARNASELRADLEQAMRLIPGPKRLNLHAIYLESDTPVSRDQIKPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWIDHCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLNPAHHIDAVESKLFGIGAESYTVGSNEFYMGYATSRQTALCLDAGHFHPTEVISDKISAAMLYVPQLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHDLFDRVHIGLDFFDASINRIAAWVIGTRNMKKALLRALLEPTAELRKLEAAGDYTARLALLEEQKSLPWQAVWEMYCQRHDTPAGSEWLESVRAYEKEILSRRG", - "protein_translation_length": 419, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948399" - ], - [ - "gene_synonym", - "NP_418340.1" - ], - [ - "gene_synonym", - "EcoGene:EG11868" - ], - [ - "gene_synonym", - "rhaB" - ], - [ - "gene_synonym", - "ECK3897" - ], - [ - "gene_synonym", - "ASAP:ABE-0012738" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32171" - ], - [ - "gene_synonym", - "JW3875" - ], - [ - "gene_synonym", - "b3904" - ], - [ - "gene_synonym", - "GI:16131744" - ] - ], - "dna_sequence": "ATGACCTTTCGCAATTGTGTCGCCGTCGATCTCGGCGCATCCAGTGGGCGCGTGATGCTGGCGCGTTACGAGCGTGAATGCCGCAGCCTGACGCTGCGCGAAATCCATCGTTTTAACAATGGGCTGCATAGTCAGAACGGCTATGTCACCTGGGATGTGGATAGCCTTGAAAGTGCCATTCGCCTTGGATTAAACAAGGTGTGCGAGGAAGGGATTCGTATCGATAGCATTGGGATTGATACCTGGGGCGTGGACTTTGTGCTGCTCGACCAACAGGGTCAGCGTGTGGGCCTGCCCGTTGCTTATCGCGATAGCCGCACCAATGGCCTAATGGCGCAGGCACAACAACAACTCGGCAAACGCGATATTTATCAACGTAGCGGCATCCAGTTTCTGCCCTTCAATACGCTTTATCAGTTGCGTGCGCTGACGGAGCAACAACCTGAACTTATTCCACACATTGCTCACGCTCTGCTGATGCCGGATTACTTCAGTTATCGCCTGACCGGCAAGATGAACTGGGAATATACCAACGCCACGACCACGCAACTGGTCAATATCAATAGCGACGACTGGGACGAGTCGCTACTGGCGTGGAGCGGGGCCAACAAAGCCTGGTTTGGTCGCCCGACGCATCCGGGTAATGTCATAGGTCACTGGATTTGCCCGCAGGGTAATGAGATTCCAGTGGTCGCCGTTGCCAGCCATGATACCGCCAGCGCGGTTATCGCCTCGCCGTTAAACGGCTCACGTGCTGCTTATCTCTCTTCTGGCACCTGGTCATTGATGGGCTTCGAAAGCCAGACGCCATTTACCAATGACACGGCACTGGCAGCCAACATCACCAATGAAGGCGGGGCGGAAGGTCGCTATCGGGTGCTGAAAAATATTATGGGCTTATGGCTGCTTCAGCGAGTGCTTCAGGAGCAGCAAATCAACGATCTTCCGGCGCTTATCTCCGCGACACAGGCACTTCCGGCTTGCCGCTTCATTATCAATCCCAATGACGATCGCTTTATTAATCCTGAGACGATGTGCAGCGAAATTCAGGCTGCGTGTCGGGAAACGGCGCAACCGATCCCGGAAAGTGATGCTGAACTGGCGCGCTGCATTTTCGACAGTCTGGCGCTGCTGTATGCCGATGTGTTGCATGAGCTGGCGCAGCTGCGCGGTGAAGATTTCTCGCAACTGCATATTGTCGGCGGAGGCTGCCAGAACACGCTGCTCAACCAGCTATGCGCCGATGCCTGCGGTATTCGGGTGATCGCCGGGCCTGTTGAAGCCTCGACGCTCGGCAATATCGGCATCCAGTTAATGACGCTGGATGAACTCAACAATGTGGATGATTTCCGTCAGGTCGTCAGCACCACCGCGAATCTGACCACCTTTACCCCTAATCCTGACAGTGAAATTGCCCACTATGTGGCGCAGATTCACTCTACACGACAGACAAAGGAGCTTTGCGCATGA", 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"gene_synonym", - "EcoGene:EG10843" - ], - [ - "gene_synonym", - "JW3876" - ], - [ - "gene_synonym", - "b3905" - ], - [ - "gene_synonym", - "ASAP:ABE-0012745" - ], - [ - "gene_synonym", - "GI:16131745" - ], - [ - "gene_synonym", - "NP_418341.1" - ], - [ - "gene_synonym", - "GeneID:948397" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09377" - ] - ], - "dna_sequence": "ATGACCGTATTACATAGTGTGGATTTTTTTCCGTCTGGTAACGCGTCCGTGGCGATAGAACCCCGGCTCCCGCAGGCGGATTTTCCTGAACATCATCATGATTTTCATGAAATTGTGATTGTCGAACATGGCACGGGTATTCATGTGTTTAATGGGCAGCCCTATACCATCACCGGTGGCACGGTCTGTTTCGTACGCGATCATGATCGGCATCTGTATGAACATACCGATAATCTGTGTCTGACCAATGTGCTGTATCGCTCGCCGGATCGATTTCAGTTTCTCGCCGGGCTGAATCAGTTGCTGCCACAAGAGCTGGATGGGCAGTATCCGTCTCACTGGCGCGTTAACCACAGCGTATTGCAGCAGGTGCGACAGCTGGTTGCACAGATGGAACAGCAGGAAGGGGAAAATGATTTACCCTCGACCGCCAGTCGCGAGATCTTGTTTATGCAATTACTGCTCTTGCTGCGTAAAAGCAGTTTGCAGGAGAACCTGGAAAACAGCGCATCACGTCTCAACTTGCTTCTGGCCTGGCTGGAGGACCATTTTGCCGATGAGGTGAATTGGGATGCCGTGGCGGATCAATTTTCTCTTTCACTGCGTACGCTACATCGGCAGCTTAAGCAGCAAACGGGACTGACGCCTCAGCGATACCTGAACCGCCTGCGACTGATGAAAGCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAA", - "dna_sequence_length": 837, - "functions": [ - "transcriptional activator of rhaBAD and rhaT" - ], - "id": "CDS_3834", - "location": [ - [ - "NC_000913", - 4097736, - "+", - 837 - ] - ], - "md5": "81e29e63d7631f9c93f8c61287b4e2b5", - "parent_gene": "", - "protein_md5": "3625995567cf62d5b6d1056aa156bfb8", - "protein_translation": "MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGGTVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSVLQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWLEDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVTDIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ", - "protein_translation_length": 278, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rhaC1" - ], - [ - "gene_synonym", - "ECK3899" - ], - [ - "gene_synonym", - "rhaR" - ], - [ - "gene_synonym", - "EcoGene:EG10842" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09378" - ], - [ - "gene_synonym", - "GI:171701684" - ], - [ - "gene_synonym", - "JW3877" - ], - [ - "gene_synonym", - "b3906" - ], - [ - "gene_synonym", - "NP_418342.2" - ], - [ - "gene_synonym", - "GeneID:948396" - ], - [ - "gene_synonym", - "ASAP:ABE-0012747" - ] - ], - "dna_sequence": "GTGGCGCATCAGTTAAAACTTCTCAAAGATGATTTTTTTGCCAGCGACCAGCAGGCAGTCGCTGTGGCTGACCGTTATCCGCAAGATGTCTTTGCTGAACATACACATGATTTTTGTGAGCTGGTGATTGTCTGGCGCGGTAATGGCCTGCATGTACTCAACGATCGCCCTTATCGCATTACCCGTGGCGATCTCTTTTACATTCATGCTGACGATAAACACTCCTACGCTTCCGTTAACGATCTGGTTTTGCAGAATATTATTTATTGCCCGGAGCGTCTGAAGCTGAATCTTGACTGGCAGGGGGCGATTCCGGGATTTAACGCCAGCGCAGGGCAACCACACTGGCGCTTAGGTAGCATGGGGATGGCGCAGGCGCGGCAGGTTATCGGTCAGCTTGAGCATGAAAGTAGTCAGCATGTGCCGTTTGCTAACGAAATGGCTGAGTTGCTGTTCGGGCAGTTGGTGATGTTGCTGAATCGCCATCGTTACACCAGTGATTCGTTGCCGCCAACATCCAGCGAAACGTTGCTGGATAAGCTGATTACCCGGCTGGCGGCTAGCCTGAAAAGTCCCTTTGCGCTGGATAAATTTTGTGATGAGGCATCGTGCAGTGAGCGCGTTTTGCGTCAGCAATTTCGCCAGCAGACTGGAATGACCATCAATCAATATCTGCGACAGGTCAGAGTGTGTCATGCGCAATATCTTCTCCAGCATAGCCGCCTGTTAATCAGTGATATTTCGACCGAATGTGGCTTTGAAGATAGTAACTATTTTTCGGTGGTGTTTACCCGGGAAACCGGGATGACGCCCAGCCAGTGGCGTCATCTCAATTCGCAGAAAGATTAA", - "dna_sequence_length": 849, - "functions": [ - "transcriptional activator of rhaSR" - ], - "id": "CDS_3835", - "location": [ - [ - "NC_000913", - 4098646, - "+", - 849 - ] - ], - "md5": "86ad17b5a27164ddbfc31ef1280948ec", - "parent_gene": "", - "protein_md5": "c1371aff9f64b961d6606a7d5ee2e825", - "protein_translation": "MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD", - "protein_translation_length": 282, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948398" - ], - [ - "gene_synonym", - "rhaT" - ], - [ - "gene_synonym", - "GI:16131747" - ], - [ - "gene_synonym", - "NP_418343.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27125" - ], - [ - "gene_synonym", - "b3907" - ], - [ - "gene_synonym", - "ASAP:ABE-0012749" - ], - [ - "gene_synonym", - "EcoGene:EG11313" - ], - [ - "gene_synonym", - "JW3878" - ], - [ - "gene_synonym", - "ECK3900" - ] - ], - "dna_sequence": "ATGAGTAACGCGATTACGATGGGGATATTTTGGCATTTGATCGGCGCGGCCAGTGCAGCCTGTTTTTACGCTCCGTTCAAAAAAGTAAAAAAATGGTCATGGGAAACCATGTGGTCAGTCGGTGGGATTGTTTCGTGGATTATTCTGCCGTGGGCCATCAGCGCCCTGTTACTACCGAATTTCTGGGCGTATTACAGCTCGTTTAGTCTCTCTACGCGACTGCCTGTTTTTCTGTTCGGCGCTATGTGGGGGATCGGTAATATCAACTACGGCCTGACCATGCGTTATCTCGGCATGTCGATGGGAATTGGCATCGCCATTGGCATTACGTTGATTGTCGGTACGCTGATGACGCCAATTATCAACGGCAATTTCGATGTGTTGATTAGCACCGAAGGCGGACGCATGACGTTGCTCGGCGTTCTGGTGGCGCTGATTGGCGTAGGGATTGTAACTCGCGCCGGGCAGTTGAAAGAGCGCAAGATGGGCATTAAAGCCGAAGAGTTCAATCTGAAAAAAGGGCTGGTGCTGGCGGTGATGTGCGGCATTTTCTCTGCCGGGATGTCCTTTGCGATGAACGCCGCAAAACCGATGCATGAAGCCGCTGCCGCACTTGGCGTCGATCCACTGTATGTCGCTCTGCCAAGCTATGTTGTCATCATGGGCGGCGGCGCGATCATTAACCTCGGTTTCTGTTTTATTCGTCTGGCAAAAGTGAAGGATTTGTCGCTAAAAGCCGACTTCTCGCTGGCAAAATCGCTGATCATTCACAATGTGTTACTCTCGACACTGGGCGGGTTGATGTGGTATCTGCAATTCTTTTTCTATGCCTGGGGCCACGCCCGCATTCCGGCGCAGTATGACTACATCAGTTGGATGCTGCATATGAGTTTCTATGTATTGTGCGGCGGTATCGTCGGGCTGGTGCTGAAAGAGTGGAACAATGCAGGACGCCGTCCGGTAACGGTGTTGAGCCTCGGTTGTGTGGTGATTATTGTCGCCGCTAACATCGTCGGCATCGGCATGGCGAATTAA", - "dna_sequence_length": 1035, - "functions": [ - "L-rhamnose:proton symporter" - ], - "id": "CDS_3836", - "location": [ - [ - "NC_000913", - 4100525, - "-", - 1035 - ] - ], - "md5": "3a82c8d624a43d80480ecbbb0a9587e6", - "parent_gene": "", - "protein_md5": "a298828f1be9b0f60afe4316519db292", - "protein_translation": "MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIVSWIILPWAISALLLPNFWAYYSSFSLSTRLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGNFDVLISTEGGRMTLLGVLVALIGVGIVTRAGQLKERKMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGAIINLGFCFIRLAKVKDLSLKADFSLAKSLIIHNVLLSTLGGLMWYLQFFFYAWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVAANIVGIGMAN", - "protein_translation_length": 344, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418344.3" - ], - [ - "gene_synonym", - "ASAP:ABE-0012761" - ], - [ - "gene_synonym", - "GeneID:948403" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00448" - ], - [ - "gene_synonym", - "sodA" - ], - [ - "gene_synonym", - "GI:49176442" - ], - [ - "gene_synonym", - "EcoGene:EG10953" - ], - [ - "gene_synonym", - "JW3879" - ], - [ - "gene_synonym", - "b3908" - ], - [ - "gene_synonym", - "ECK3901" - ] - ], - "dna_sequence": "ATGAGCTATACCCTGCCATCCCTGCCGTATGCTTACGATGCCCTGGAACCGCACTTCGATAAGCAGACCATGGAAATCCACCACACCAAACACCATCAGACCTACGTAAACAACGCCAACGCGGCGCTGGAAAGCCTGCCAGAATTTGCCAACCTGCCGGTTGAAGAGCTGATCACCAAACTGGACCAGCTGCCAGCAGACAAGAAAACCGTACTGCGCAACAACGCTGGCGGTCACGCTAACCACAGCCTGTTCTGGAAAGGTCTGAAAAAAGGCACCACCCTGCAGGGTGACCTGAAAGCGGCTATCGAACGTGACTTCGGCTCCGTTGATAACTTCAAAGCAGAATTTGAAAAAGCGGCAGCTTCCCGCTTTGGTTCCGGCTGGGCATGGCTGGTGCTGAAAGGCGATAAACTGGCGGTGGTTTCTACTGCTAACCAGGATTCTCCGCTGATGGGTGAAGCTATTTCTGGCGCTTCCGGCTTCCCGATTATGGGCCTGGATGTGTGGGAACATGCTTACTACCTGAAATTCCAGAACCGCCGTCCGGACTACATTAAAGAGTTCTGGAACGTGGTGAACTGGGACGAAGCAGCGGCACGTTTTGCGGCGAAAAAATAA", - "dna_sequence_length": 621, - "functions": [ - "superoxide dismutase, Mn" - ], - "id": "CDS_3837", - "location": [ - [ - "NC_000913", - 4100810, - "+", - 621 - ] - ], - "md5": "1c7452bb2c6608a98cc1effb74c76962", - "parent_gene": "", - "protein_md5": "8738a8053daf45e99fe4295483914470", - "protein_translation": "MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGASGFPIMGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK", - "protein_translation_length": 206, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11869" - ], - [ - "gene_synonym", - "NP_418345.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0012764" - ], - [ - "gene_synonym", - "kdgT" - ], - [ - "gene_synonym", - "GI:90111665" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A712" - ], - [ - "gene_synonym", - "JW5560" - ], - [ - "gene_synonym", - "b3909" - ], - [ - "gene_synonym", - "ECK3902" - ], - [ - "gene_synonym", - "GeneID:948407" - ] - ], - "dna_sequence": "ATGCAGATAAAACGCTCGATTGAGAAAATCCCGGGGGGGATGATGCTCGTCCCGCTATTCCTTGGCGCACTGTGCCACACCTTCTCGCCGGGGGCGGGGAAATATTTTGGATCATTCACCAACGGGATGATTACCGGTACGGTGCCCATTCTGGCGGTGTGGTTTTTTTGCATGGGGGCGTCAATAAAATTAAGCGCGACGGGAACGGTACTGCGTAAATCCGGTACGCTGGTGGTAACTAAAATTGCCGTCGCGTGGGTGGTTGCGGCAATTGCCTCGCGTATTATTCCGGAACATGGTGTTGAAGTTGGATTCTTTGCCGGACTTTCAACGCTGGCGCTGGTGGCGGCGATGGATATGACCAATGGCGGACTTTACGCTTCCATCATGCAGCAGTACGGCACAAAAGAAGAAGCTGGGGCATTTGTGTTGATGTCGTTGGAGTCCGGGCCGCTCATGACGATGATTATTCTGGGCACTGCCGGGATTGCCTCGTTTGAACCGCATGTTTTCGTCGGCGCAGTATTACCGTTCCTGGTGGGCTTTGCCCTGGGGAACCTTGACCCTGAATTGCGAGAATTTTTCAGCAAAGCGGTGCAAACGCTGATTCCATTCTTTGCCTTCGCGCTGGGCAATACCATTGATTTGACTGTGATTGCCCAGACTGGTTTGCTGGGGATCCTGTTGGGTGTGGCAGTAATTATCGTGACCGGTATTCCGTTGATTATCGCCGATAAATTGATTGGCGGTGGCGATGGCACTGCCGGAATTGCCGCTTCCAGTTCCGCAGGGGCCGCGGTAGCGACACCTGTGCTGATTGCAGAAATGGTGCCTGCGTTTAAACCGATGGCTCCGGCAGCAACTTCGCTGGTAGCGACGGCGGTCATTGTGACTTCGATTCTGGTGCCAATTCTTACCTCTATCTGGTCACGTAAAGTCAAAGCCAGAGCAGCGAAAATCGAAATTTTAGGTACGGTGAAATAA", - "dna_sequence_length": 984, - "functions": [ - "2-keto-3-deoxy-D-gluconate transporter" - ], - "id": "CDS_3838", - "location": [ - [ - "NC_000913", - 4101690, - "+", - 984 - ] - ], - "md5": "fe6b9f73c28f1d72ab1198d81b1b2ded", - "parent_gene": "", - "protein_md5": "c99947d21a1fb44906dc1d9055b5af56", - "protein_translation": "MQIKRSIEKIPGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMITGTVPILAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAGLSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASFEPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGLLGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEMVPAFKPMAPAATSLVATAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK", - "protein_translation_length": 327, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yiiM" - ], - [ - "gene_synonym", - "JW5559" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32157" - ], - [ - "gene_synonym", - "ASAP:ABE-0012769" - ], - [ - "gene_synonym", - "GI:90111666" - ], - [ - "gene_synonym", - "NP_418346.2" - ], - [ - "gene_synonym", - "GeneID:948406" - ], - [ - "gene_synonym", - "b3910" - ], - [ - "gene_synonym", - "EcoGene:EG11870" - ], - [ - "gene_synonym", - "ECK3903" - ] - ], - "dna_sequence": "ATGCGATATCCGGTTGATGTATACACAGGCAAGATTCAGGCTTATCCCGAAGGCAAACCCAGCGCAATTGCTAAAATCCAGGTTGATGGTGAGTTGATGCTGACGGAGCTGGGGCTGGAAGGTGACGAGCAGGCGGAGAAAAAGGTTCACGGCGGGCCAGACAGAGCGCTGTGTCATTATCCTCGTGAGCATTATCTCTACTGGGCGCGGGAATTTCCGGAACAGGCGGAGTTGTTTGTTGCGCCTGCGTTTGGTGAAAACCTCTCAACCGACGGCCTGACGGAAAGTAATGTTTATATGGGCGATATTTTCCGCTGGGGAGAGGCATTAATTCAGGTCAGCCAGCCGCGCTCGCCTTGCTATAAACTCAATTACCATTTTGATATCAGCGATATAGCGCAGTTGATGCAAAACACAGGTAAGGTGGGGTGGTTGTATAGCGTGATAGCGCCAGGGAAAGTGTCTGCGGACGCGCCGCTGGAGTTGGTTTCCCGTGTCAGCGATGTGACCGTGCAGGAGGCTGCCGCCATCGCATGGCATATGCCGTTTGATGACGATCAATATCACCGTTTACTCTCCGCTGCCGGGTTATCGAAAAGCTGGACGCGGACGATGCAAAAGCGCCGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAA", - "dna_sequence_length": 675, - "functions": [ - "6-N-hydroxylaminopurine resistance protein" - ], - "id": "CDS_3839", - "location": [ - [ - "NC_000913", - 4102822, - "+", - 675 - ] - ], - "md5": "95eb3799367df3ca633c900cb0026874", - "parent_gene": "", - "protein_md5": "8064773342d1f667eba1b471931772b8", - "protein_translation": "MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQAEKKVHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGDIFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPLELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFSRRLWGK", - "protein_translation_length": 224, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ecfB" - ], - [ - "gene_synonym", - "GeneID:948405" - ], - [ - "gene_synonym", - "ASAP:ABE-0012772" - ], - [ - "gene_synonym", - "cpxA" - ], - [ - "gene_synonym", - "eup" - ], - [ - "gene_synonym", - "EcoGene:EG10163" - ], - [ - "gene_synonym", - "NP_418347.1" - ], - [ - "gene_synonym", - "rssE" - ], - [ - "gene_synonym", - "ECK3904" - ], - [ - "gene_synonym", - "ssd" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE82" - ], - [ - "gene_synonym", - "JW3882" - ], - [ - "gene_synonym", - "b3911" - ], - [ - "gene_synonym", - "GI:16131751" - ] - ], - "dna_sequence": "ATGATAGGCAGCTTAACCGCGCGCATCTTCGCCATCTTCTGGCTGACGCTGGCGCTGGTGTTGATGTTGGTTTTGATGTTACCCAAGCTCGATTCACGCCAGATGACCGAGCTTCTGGATAGCGAACAGCGTCAGGGGCTGATGATTGAGCAGCATGTCGAAGCGGAGCTGGCGAACGATCCGCCCAACGATTTAATGTGGTGGCGGCGTCTGTTCCGGGCGATTGATAAGTGGGCACCGCCAGGACAGCGTTTGTTATTGGTGACCACCGAAGGCCGCGTGATCGGCGCTGAACGCAGCGAAATGCAGATCATTCGTAACTTTATTGGTCAGGCCGATAACGCCGATCATCCGCAGAAGAAAAAGTATGGCCGCGTGGAACTGGTCGGTCCGTTCTCCGTGCGTGATGGCGAAGATAATTACCAACTTTATCTGATTCGTCCGGCCAGCAGTTCTCAATCCGATTTCATTAACTTACTGTTTGACCGCCCGCTATTACTGCTGATTGTCACCATGTTGGTCAGTACGCCGCTGCTGTTGTGGTTGGCCTGGAGTCTGGCAAAACCGGCGCGTAAGCTGAAAAACGCTGCCGATGAAGTTGCCCAGGGAAACTTACGCCAGCACCCGGAACTGGAAGCGGGGCCACAGGAATTCCTTGCCGCAGGTGCCAGTTTTAACCAGATGGTCACCGCGCTGGAGCGCATGATGACCTCTCAGCAGCGTCTGCTTTCTGATATCTCTCACGAGCTGCGCACCCCGCTGACGCGTCTGCAACTGGGTACGGCGTTACTGCGCCGTCGTAGCGGTGAAAGCAAGGAACTGGAGCGTATTGAAACCGAAGCGCAACGTCTGGACAGCATGATCAACGATCTGTTGGTGATGTCACGTAATCAGCAAAAAAACGCGCTGGTTAGCGAAACCATCAAAGCCAACCAGTTGTGGAGTGAAGTGCTGGATAACGCGGCGTTCGAAGCCGAGCAAATGGGCAAGTCGTTGACAGTTAACTTCCCGCCTGGGCCGTGGCCGCTGTACGGCAATCCGAACGCCCTGGAAAGTGCGCTGGAAAACATTGTTCGTAATGCTCTGCGTTATTCCCATACGAAGATTGAAGTGGGCTTTGCGGTAGATAAAGACGGTATCACCATTACGGTGGACGACGATGGTCCTGGCGTTAGCCCGGAAGATCGCGAACAGATTTTCCGTCCGTTCTATCGTACCGATGAAGCACGCGATCGTGAATCTGGCGGTACAGGTTTGGGGCTGGCGATTGTTGAAACCGCCATTCAGCAGCATCGTGGCTGGGTGAAGGCAGAAGACAGCCCGCTGGGCGGTTTACGGCTGGTGATTTGGTTGCCGCTGTATAAGCGGAGTTAA", - "dna_sequence_length": 1374, - "functions": [ - "sensory histidine kinase in two-component regulatory system with CpxR" - ], - "id": "CDS_3840", - "location": [ - [ - "NC_000913", - 4104975, - "-", - 1374 - ] - ], - "md5": "2e6a67d04258286d9c4ae1e45a36d03d", - "parent_gene": "", - "protein_md5": "19c5ed765ae963a9382e13d89227355c", - "protein_translation": "MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQRQGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEMQIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLLFDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEFLAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYKRS", - "protein_translation_length": 457, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131752" - ], - [ - "gene_synonym", - "ASAP:ABE-0012774" - ], - [ - "gene_synonym", - "yiiA" - ], - [ - "gene_synonym", - "cpxR" - ], - [ - "gene_synonym", - "EcoGene:EG10020" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE88" - ], - [ - "gene_synonym", - "ECK3905" - ], - [ - "gene_synonym", - "GeneID:948404" - ], - [ - "gene_synonym", - "JW3883" - ], - [ - "gene_synonym", - "b3912" - ], - [ - "gene_synonym", - "NP_418348.1" - ] - ], - "dna_sequence": "ATGAATAAAATCCTGTTAGTTGATGATGACCGAGAGCTGACTTCCCTATTAAAGGAGCTGCTCGAGATGGAAGGCTTCAACGTGATTGTTGCCCACGATGGGGAACAGGCGCTTGATCTTCTGGACGACAGCATTGATTTACTTTTGCTTGACGTAATGATGCCGAAGAAAAATGGTATCGACACATTAAAAGCACTTCGCCAGACACACCAGACGCCTGTCATTATGTTGACGGCGCGCGGCAGTGAACTTGATCGCGTTCTCGGCCTTGAGCTGGGCGCAGATGACTATCTCCCGAAACCGTTTAATGATCGTGAGCTGGTGGCACGTATTCGCGCGATCCTGCGCCGTTCGCACTGGAGCGAGCAACAGCAAAACAACGACAACGGTTCACCGACACTGGAAGTTGATGCCTTAGTGCTGAATCCAGGCCGTCAGGAAGCCAGCTTCGACGGGCAAACGCTGGAGTTAACCGGTACTGAGTTTACCCTGCTCTATTTGCTGGCACAGCATCTGGGTCAGGTGGTTTCCCGTGAACATTTAAGCCAGGAAGTGTTGGGCAAACGCCTGACGCCTTTCGACCGCGCTATTGATATGCACATTTCCAACCTGCGTCGTAAACTGCCGGATCGTAAAGATGGTCACCCGTGGTTTAAAACCTTGCGTGGTCGCGGCTATCTGATGGTTTCTGCTTCATGA", - "dna_sequence_length": 699, - "functions": [ - "response regulator in two-component regulatory system with CpxA" - ], - "id": "CDS_3841", - "location": [ - [ - "NC_000913", - 4105670, - "-", - 699 - ] - ], - "md5": "c7cbb039bbd28ce78d22a586de26855a", - "parent_gene": "", - "protein_md5": "893a3274dc45ef91b256983a83c8b153", - "protein_translation": "MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDSIDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGTEFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWFKTLRGRGYLMVSAS", - "protein_translation_length": 232, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5558" - ], - [ - "gene_synonym", - "yiiO" - ], - [ - "gene_synonym", - "b4484" - ], - [ - "gene_synonym", - "cpxP" - ], - [ - "gene_synonym", - "GeneID:2847688" - ], - [ - "gene_synonym", - "GI:49176443" - ], - [ - "gene_synonym", - "ECK3906" - ], - [ - "gene_synonym", - "EcoGene:EG11872" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE85" - ], - [ - "gene_synonym", - "YP_026277.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0174117" - ] - ], - "dna_sequence": "ATGCGCATAGTTACCGCTGCCGTCATGGCCTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCAGTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAACAGCCTCCTGTTAATGTTAGCGAACTGGAGACAATGCATCGCCTTGTCACCGCAGAAAATTTTGATGAAAACGCTGTGCGCGCACAGGCAGAAAAAATGGCGAATGAGCAAATTGCTCGTCAGGTTGAGATGGCAAAAGTCCGCAACCAAATGTATCGCCTGTTAACGCCGGAGCAGCAAGCGGTTTTAAACGAGAAACATCAACAACGAATGGAGCAGTTGCGTGACGTGACGCAATGGCAAAAAAGTTCATCGTTGAAGCTATTGAGTAGTAGCAACTCACGTTCCCAGTAG", - "dna_sequence_length": 501, - "functions": [ - "inhibitor of the cpx response", - "periplasmic adaptor protein" - ], - "id": "CDS_3842", - "location": [ - [ - "NC_000913", - 4105820, - "+", - 501 - ] - ], - "md5": "1a8a570d6c5fd81f9767feff4eb646ea", - "parent_gene": "", - "protein_md5": "dfa9e01deeb9b70c1ffa4b789a91d914", - "protein_translation": "MRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQSHMFDGISLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQAEKMANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQWQKSSSLKLLSSSNSRSQ", - "protein_translation_length": 166, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418350.1" - ], - [ - "gene_synonym", - "GeneID:948413" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69380" - ], - [ - "gene_synonym", - "ASAP:ABE-0012786" - ], - [ - "gene_synonym", - "yiiP" - ], - [ - "gene_synonym", - "JW3886" - ], - [ - "gene_synonym", - "b3915" - ], - [ - "gene_synonym", - "ECK3907" - ], - [ - "gene_synonym", - "GI:16131753" - ], - [ - "gene_synonym", - "EcoGene:EG11873" - ], - [ - "gene_synonym", - "fieF" - ] - ], - "dna_sequence": "ATGAATCAATCTTATGGACGGCTGGTCAGTCGGGCGGCGATTGCTGCGACGGCGATGGCTTCGCTGCTATTGCTGATTAAAATTTTTGCATGGTGGTATACCGGGTCGGTGAGTATTCTCGCCGCGCTGGTGGATTCGCTGGTGGATATCGGCGCGTCGTTGACGAATTTATTGGTGGTGCGATATTCCCTGCAACCTGCCGACGATAATCACTCGTTTGGTCACGGTAAAGCTGAGTCCCTCGCGGCGCTGGCGCAAAGTATGTTTATCTCCGGTTCGGCACTATTCCTGTTTTTGACGGGTATTCAACATCTGATATCTCCAACACCGATGACAGATCCAGGCGTCGGGGTTATCGTGACAATTGTGGCGCTAATTTGTACGATTATCCTTGTCTCGTTTCAGCGTTGGGTGGTGCGGCGGACGCAAAGCCAGGCGGTGCGGGCTGATATGCTACATTACCAGTCTGATGTTATGATGAACGGCGCAATTCTGCTGGCGCTGGGGTTGTCCTGGTACGGCTGGCATCGCGCCGATGCTCTGTTTGCATTGGGAATCGGCATCTATATTTTATATAGCGCGTTACGCATGGGATATGAGGCGGTACAGTCATTACTGGATCGCGCATTGCCTGATGAGGAACGGCAAGAAATTATTGATATCGTGACTTCCTGGCCGGGTGTTAGCGGCGCTCACGATCTTCGCACGCGGCAGTCAGGGCCGACCCGCTTTATTCAGATTCATTTGGAAATGGAAGACTCTCTGCCTTTGGTTCAGGCACATATGGTGGCGGATCAGGTAGAGCAGGCTATTTTACGGCGTTTTCCGGGATCGGATGTAATTATCCATCAGGACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAA", - "dna_sequence_length": 903, - "functions": [ - "ferrous iron and zinc transporter" - ], - "id": "CDS_3843", - "location": [ - [ - "NC_000913", - 4106469, - "+", - 903 - ] - ], - "md5": "e9bd0c0b6041775910f8c28ac3a3f235", - "parent_gene": "", - "protein_md5": "cc4174eee4938d92c203544008c7e362", - "protein_translation": "MNQSYGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDPCSVVPREGKRSMLS", - "protein_translation_length": 300, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10699" - ], - [ - "gene_synonym", - "ASAP:ABE-0012789" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A796" - ], - [ - "gene_synonym", - "ECK3908" - ], - [ - "gene_synonym", - "NP_418351.1" - ], - [ - "gene_synonym", - "JW3887" - ], - [ - "gene_synonym", - "b3916" - ], - [ - "gene_synonym", - "GI:16131754" - ], - [ - "gene_synonym", - "GeneID:948412" - ], - [ - "gene_synonym", - "pfkA" - ] - ], - "dna_sequence": "ATGATTAAGAAAATCGGTGTGTTGACAAGCGGCGGTGATGCGCCAGGCATGAACGCCGCAATTCGCGGGGTTGTTCGTTCTGCGCTGACAGAAGGTCTGGAAGTAATGGGTATTTATGACGGCTATCTGGGTCTGTATGAAGACCGTATGGTACAGCTAGACCGTTACAGCGTGTCTGACATGATCAACCGTGGCGGTACGTTCCTCGGTTCTGCGCGTTTCCCGGAATTCCGCGACGAGAACATCCGCGCCGTGGCTATCGAAAACCTGAAAAAACGTGGTATCGACGCGCTGGTGGTTATCGGCGGTGACGGTTCCTACATGGGTGCAATGCGTCTGACCGAAATGGGCTTCCCGTGCATCGGTCTGCCGGGCACTATCGACAACGACATCAAAGGCACTGACTACACTATCGGTTTCTTCACTGCGCTGAGCACCGTTGTAGAAGCGATCGACCGTCTGCGTGACACCTCTTCTTCTCACCAGCGTATTTCCGTGGTGGAAGTGATGGGCCGTTATTGTGGAGATCTGACGTTGGCTGCGGCCATTGCCGGTGGCTGTGAATTCGTTGTGGTTCCGGAAGTTGAATTCAGCCGTGAAGACCTGGTAAACGAAATCAAAGCGGGTATCGCGAAAGGTAAAAAACACGCGATCGTGGCGATTACCGAACATATGTGTGATGTTGACGAACTGGCGCATTTCATCGAGAAAGAAACCGGTCGTGAAACCCGCGCAACTGTGCTGGGCCACATCCAGCGCGGTGGTTCTCCGGTGCCTTACGACCGTATTCTGGCTTCCCGTATGGGCGCTTACGCTATCGATCTGCTGCTGGCAGGTTACGGCGGTCGTTGTGTAGGTATCCAGAACGAACAGCTGGTTCACCACGACATCATCGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAA", - "dna_sequence_length": 963, - "functions": [ - "6-phosphofructokinase I" - ], - "id": "CDS_3844", - "location": [ - [ - "NC_000913", - 4107552, - "+", - 963 - ] - ], - "md5": "4b16d37c8982078f6918c193e21f8425", - "parent_gene": "", - "protein_md5": "9f6606c2e93c6ac75fdc60dff2f54955", - "protein_translation": "MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEMGFPCIGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSSHQRISVVEVMGRYCGDLTLAAAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAIVAITEHMCDVDELAHFIEKETGRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLLLAGYGGRCVGIQNEQLVHHDIIDAIENMKRPFKGDWLDCAKKLY", - "protein_translation_length": 320, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "sbp" - ], - [ - "gene_synonym", - "EcoGene:EG10929" - ], - [ - "gene_synonym", - "ASAP:ABE-0012794" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG78" - ], - [ - "gene_synonym", - "ECK3909" - ], - [ - "gene_synonym", - "JW3888" - ], - [ - "gene_synonym", - "NP_418352.1" - ], - [ - "gene_synonym", - "b3917" - ], - [ - "gene_synonym", - "GI:16131755" - ], - [ - "gene_synonym", - "GeneID:948411" - ] - ], - "dna_sequence": "ATGAACAAGTGGGGCGTAGGGTTAACATTTTTGCTGGCGGCAACCAGCGTTATGGCAAAGGATATTCAGCTTCTTAACGTTTCATATGATCCAACGCGCGAATTGTACGAACAGTACAACAAGGCATTCAGCGCCCACTGGAAACAGCAAACTGGTGATAACGTGGTGATTCGTCAGTCACACGGTGGCTCAGGTAAACAAGCGACGTCGGTAATCAACGGTATTGAAGCTGATGTTGTCACGCTGGCTCTGGCCTATGACGTGGACGCAATTGCGGAACGCGGGCGGATTGATAAAGAGTGGATCAAACGTCTGCCGGATAACTCCGCACCGTACACTTCCACCATTGTTTTCCTGGTACGTAAGGGAAATCCGAAGCAGATCCATGACTGGAACGATCTGATTAAACCGGGTGTTTCGGTGATCACGCCTAATCCGAAAAGCTCTGGTGGCGCGCGCTGGAACTACCTGGCAGCCTGGGGCTACGCGCTGCATCACAACAACAACGATCAGGCAAAAGCACAGGATTTTGTTCGGGCACTGTATAAAAACGTCGAAGTTCTGGATTCTGGCGCGCGTGGCTCCACTAACACTTTTGTCGAGCGCGGAATTGGCGATGTACTGATTGCCTGGGAAAACGAAGCTCTGCTGGCAGCGAATGAACTGGGGAAAGATAAATTCGAAATCGTCACGCCGAGTGAGTCTATCCTCGCAGAGCCAACCGTGTCGGTGGTCGATAAAGTGGTCGAGAAAAAAGGTACTAAAGAGGTGGCGGAAGCCTACCTGAAATATCTCTACTCGCCAGAAGGTCAGGAAATTGCCGCGAAAAACTACTACCGTCCGCGCGACGCTGAGGTGGCGAAAAAGTACGAAAATGCGTTTCCAAAGCTGAAGTTATTCACCATTGATGAAGAGTTCGGCGGCTGGACGAAAGCGCAAAAAGAGCATTTTGCTAACGGCGGTACGTTCGATCAGATCAGCAAACGCTGA", - "dna_sequence_length": 990, - "functions": [ - "sulfate transporter subunit" - ], - "id": "CDS_3845", - "location": [ - [ - "NC_000913", - 4108834, - "+", - 990 - ] - ], - "md5": "b7ea3613965b7f1b43c61cac03b3b857", - "parent_gene": "", - "protein_md5": "584800b59681e462425a4237fd481a99", - "protein_translation": "MNKWGVGLTFLLAATSVMAKDIQLLNVSYDPTRELYEQYNKAFSAHWKQQTGDNVVIRQSHGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKEWIKRLPDNSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNNNDQAKAQDFVRALYKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLAANELGKDKFEIVTPSESILAEPTVSVVDKVVEKKGTKEVAEAYLKYLYSPEGQEIAAKNYYRPRDAEVAKKYENAFPKLKLFTIDEEFGGWTKAQKEHFANGGTFDQISKR", - "protein_translation_length": 329, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ushB" - ], - [ - "gene_synonym", - "EcoGene:EG10138" - ], - [ - "gene_synonym", - "NP_418353.1" - ], - [ - "gene_synonym", - "pnuE" - ], - [ - "gene_synonym", - "cdh" - ], - [ - "gene_synonym", - "ASAP:ABE-0012797" - ], - [ - "gene_synonym", - "GeneID:948410" - ], - [ - "gene_synonym", - "b3918" - ], - [ - "gene_synonym", - "JW3889" - ], - [ - "gene_synonym", - "GI:16131756" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06282" - ], - [ - "gene_synonym", - "ECK3910" - ] - ], - "dna_sequence": "ATGAAAAAAGCGGGTCTTCTTTTTTTGGTGATGATAGTTATCGCCGTTGTGGCTGCCGGTATTGGTTACTGGAAATTAACCGGTGAAGAGTCGGATACATTACGTAAGATTGTCCTTGAGGAATGTTTGCCCAATCAGCAGCAAAATCAAAATCCTTCGCCATGTGCGGAAGTCAAACCCAATGCCGGATACGTGGTTTTAAAAGATCTTAATGGCCCACTGCAATATCTGTTGATGCCAACGTATCGTATTAACGGTACTGAAAGTCCTTTGTTGACCGATCCTTCAACGCCGAACTTCTTTTGGTTGGCTTGGCAGGCGCGTGATTTTATGAGCAAAAAATACGGCCAGCCGGTTCCCGATCGCGCGGTTTCTTTGGCGATCAACTCCCGCACCGGGCGTACGCAAAACCATTTTCATATTCATATCTCTTGTATTCGTCCTGATGTGCGCAAACAGCTGGATAACAATCTGGCGAACATCAGCAGCCGCTGGTTGCCACTGCCAGGTGGTTTGCGCGGGCATGAATACCTGGCGCGTCGGGTAACGGAAAGCGAACTGGTACAACGCAGCCCATTTATGATGCTGGCAGAAGAAGTACCTGAGGCGCGGGAACATATGGGACGCTACGGGCTGGCGATGGTACGGCAGAGTGATAACTCATTTGTATTGCTGGCGACACAACGAAATCTACTGACGCTTAACCGTGCTTCAGCCGAGGAAATTCAGGATCATCAGTGTGAGATTTTGCGTTAA", - "dna_sequence_length": 756, - "functions": [ - "CDP-diacylglycerol phosphotidylhydrolase" - ], - "id": "CDS_3846", - "location": [ - [ - "NC_000913", - 4109930, - "+", - 756 - ] - ], - "md5": "68f46594f77481f2cc8a338afd4115d3", - "parent_gene": "", - "protein_md5": "4f9f5141efd0d5b28af1bbe6ff6dcb73", - "protein_translation": "MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLPNQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVRKQLDNNLANISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGRYGLAMVRQSDNSFVLLATQRNLLTLNRASAEEIQDHQCEILR", - "protein_translation_length": 251, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "tpiA" - ], - [ - "gene_synonym", - "GeneID:948409" - ], - [ - "gene_synonym", - "ASAP:ABE-0012799" - ], - [ - "gene_synonym", - "tpi" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A858" - ], - [ - "gene_synonym", - "NP_418354.1" - ], - [ - "gene_synonym", - "b3919" - ], - [ - "gene_synonym", - "GI:16131757" - ], - [ - "gene_synonym", - "JW3890" - ], - [ - "gene_synonym", - "ECK3911" - ], - [ - "gene_synonym", - "EcoGene:EG11015" - ] - ], - "dna_sequence": "ATGCGACATCCTTTAGTGATGGGTAACTGGAAACTGAACGGCAGCCGCCACATGGTTCACGAGCTGGTTTCTAACCTGCGTAAAGAGCTGGCAGGTGTTGCTGGCTGTGCGGTTGCAATCGCACCACCGGAAATGTATATCGATATGGCGAAGCGCGAAGCTGAAGGCAGCCACATCATGCTGGGTGCGCAAAACGTGGACCTGAACCTGTCCGGCGCATTCACCGGTGAAACCTCTGCTGCTATGCTGAAAGACATCGGCGCACAGTACATCATCATCGGTCACTCTGAACGTCGTACTTACCACAAAGAATCTGACGAACTGATCGCGAAAAAATTCGCGGTGCTGAAAGAGCAGGGCCTGACTCCGGTTCTGTGCATCGGTGAAACCGAAGCTGAAAATGAAGCGGGCAAAACTGAAGAAGTTTGCGCACGTCAGATCGACGCGGTACTGAAAACTCAGGGTGCTGCGGCATTCGAAGGTGCGGTTATCGCTTACGAACCTGTATGGGCAATCGGTACTGGCAAATCTGCAACTCCGGCTCAGGCACAGGCTGTTCACAAATTCATCCGTGACCACATCGCTAAAGTTGACGCTAACATCGCTGAACAAGTGATCATTCAGTACGGCGGCTCTGTAAACGCGTCTAACGCTGCAGAACTGTTTGCTCAGCCGGATATCGACGGCGCGCTGGTTGGTGGTGCTTCTCTGAAAGCTGACGCCTTCGCAGTAATCGTTAAAGCTGCAGAAGCGGCTAAACAGGCTTAA", - "dna_sequence_length": 768, - "functions": [ - "triosephosphate isomerase" - ], - "id": "CDS_3847", - "location": [ - [ - "NC_000913", - 4111507, - "-", - 768 - ] - ], - "md5": "0e4ab330ea50809cf5b00f1de26503e4", - "parent_gene": "", - "protein_md5": "37cc44e310531f01ba4bb7cee5d65c85", - "protein_translation": "MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQA", - "protein_translation_length": 255, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32160" - ], - [ - "gene_synonym", - "GeneID:948408" - ], - [ - "gene_synonym", - "NP_418355.1" - ], - [ - "gene_synonym", - "b3920" - ], - [ - "gene_synonym", - "GI:16131758" - ], - [ - "gene_synonym", - "yiiQ" - ], - [ - "gene_synonym", - "EcoGene:EG11874" - ], - [ - "gene_synonym", - "JW3891" - ], - [ - "gene_synonym", - "ECK3912" - ], - [ - "gene_synonym", - "ASAP:ABE-0012802" - ] - ], - "dna_sequence": "ATGAAGCCAGGGTGTACGCTGTTTTTTCTCTTATGTTCTGCATTAACCGTTACAACAGAGGCGCATGCACAAACACCAGATACGGCAACGACCGCGCCTTATCTGCTGGCTGGAGCCCCTACTTTCGATCTCTCCATCAGCCAGTTTCGAGAAGACTTTAACAGCCAGAATCCCAGCCTGCCACTGAACGAATTTCGTGCCATCGACAGCAGTCCCGACAAAGCCAATCTCACTCGTGCTGCAAGTAAAATTAATGAGAACTTGTATGCTTCTACAGCGCTGGAGCGCGGTACCTTAAAAATCAAAAGCATTCAAATGACCTGGCTACCCATCCAGGGGCCAGAGCAAAAAGCCGCGAAAGCGAAAGCTCAGGAATACATGGCAGCGGTGATCCGCACACTCACCCCATTAATGACCAAAACACAAAGCCAGAAAAAACTGCAGTCGCTACTAACGGCGGGGAAAAACAAACGTTATTACACCGAGACAGAAGGTGCACTGCGTTATGTTGTCGCGGACAACGGCGAAAAGGGGCTGACCTTCGCTGTTGAACCGATTAAGCTGGCGCTATCTGAATCGCTTGAAGGTTTGAATAAATGA", - "dna_sequence_length": 600, - "functions": [ - "DUF1454 family putative periplasmic protein" - ], - "id": "CDS_3848", - "location": [ - [ - "NC_000913", - 4112214, - "-", - 600 - ] - ], - "md5": "fd0964295086388a79e39c2884096ac7", - "parent_gene": "", - "protein_md5": "1d30a08a1f959757a1607e72126a36a0", - "protein_translation": "MKPGCTLFFLLCSALTVTTEAHAQTPDTATTAPYLLAGAPTFDLSISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIKSIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYYTETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK", - "protein_translation_length": 199, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11875" - ], - [ - "gene_synonym", - "NP_418356.1" - ], - [ - "gene_synonym", - "b3921" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF34" - ], - [ - "gene_synonym", - "GI:16131759" - ], - [ - "gene_synonym", - "GeneID:948417" - ], - [ - "gene_synonym", - "yiiR" - ], - [ - "gene_synonym", - "ECK3913" - ], - [ - "gene_synonym", - "ASAP:ABE-0012809" - ], - [ - "gene_synonym", - "JW3892" - ] - ], - "dna_sequence": "ATGACCATACAGCAATGGTTATTCTCATTTAAAGGGCGTATTGGACGCCGTGATTTCTGGATTTGGATAGGCCTGTGGTTCGCAGGCATGCTGGTGCTTTTCTCACTGGCGGGTAAGAATCTACTCGATATTCAGACCGCGGCGTTTTGCCTTGTGTGCTTGCTCTGGCCAACAGCGGCAGTAACTGTTAAGCGCTTGCATGATCGCGGGCGTTCCGGCGCATGGGCATTTCTGATGATTGTGGCGTGGATGCTGCTGGCGGGTAACTGGGCGATTTTACCGGGTGTCTGGCAATGGGCGGTGGGGCGTTTTGTCCCGACGTTGATTCTGGTGATGATGCTTATCGATCTTGGTGCGTTTGTTGGCACACAAGGCGAAAATAAATATGGTAAAGATACTCAGGATGTGAAGTATAAAGCCGACAATAAATCAAGTAATTAA", - "dna_sequence_length": 441, - "functions": [ - "DUF805 family putative inner membrane protein" - ], - "id": "CDS_3849", - "location": [ - [ - "NC_000913", - 4112315, - "+", - 441 - ] - ], - "md5": "83a09d663a28623eda96acd9ddec6e1e", - "parent_gene": "", - "protein_md5": "2d0b7132078823aa49193912d70fce18", - "protein_translation": "MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLVLFSLAGKNLLDIQTAAFCLVCLLWPTAAVTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVGRFVPTLILVMMLIDLGAFVGTQGENKYGKDTQDVKYKADNKSSN", - "protein_translation_length": 146, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418357.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012813" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32162" - ], - [ - "gene_synonym", - "GI:16131760" - ], - [ - "gene_synonym", - "b3922" - ], - [ - "gene_synonym", - "EcoGene:EG11876" - ], - [ - "gene_synonym", - "GeneID:948416" - ], - [ - "gene_synonym", - "yiiS" - ], - [ - "gene_synonym", - "ECK3914" - ], - [ - "gene_synonym", - "JW3893" - ] - ], - "dna_sequence": "ATGAAAGATGTCGTAGATAAATGCAGTACTAAAGGATGTGCGATTGATATCGGTACGGTGATTGATAACGACAACTGTACCAGTAAGTTTTCGCGCTTTTTTGCCACCCGCGAAGAAGCAGAGTCTTTTATGACCAAACTGAAAGAGCTTGCCGCCGCTACATCCTCTGCAGATGAAGGGGCCAGCGTGGCCTATAAGATTAAGGATCTGGAGGGGCAAGTTGAGCTTGATGCGGCCTTCACTTTCTCATGCCAGGCCGAGATGATTATTTTTGAGTTATCACTGCGTTCGTTAGCTTGA", - "dna_sequence_length": 300, - "functions": [ - "UPF0381 family protein" - ], - "id": "CDS_3850", - "location": [ - [ - "NC_000913", - 4112967, - "+", - 300 - ] - ], - "md5": "ed37685b398f47e7b6ce6d047cadfa49", - "parent_gene": "", - "protein_md5": "f6c700aae0873675089d290443b8a219", - "protein_translation": "MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATSSADEGASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA", - "protein_translation_length": 99, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418358.1" - ], - [ - "gene_synonym", - "GeneID:948415" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAB8" - ], - [ - "gene_synonym", - "ASAP:ABE-0012816" - ], - [ - "gene_synonym", - "EcoGene:EG11877" - ], - [ - "gene_synonym", - "b3923" - ], - [ - "gene_synonym", - "GI:16131761" - ], - [ - "gene_synonym", - "JW3894" - ], - [ - "gene_synonym", - "ECK3915" - ], - [ - "gene_synonym", - "uspD" - ], - [ - "gene_synonym", - "yiiT" - ] - ], - "dna_sequence": "ATGGCTTATAAACACATTGGCGTGGCAATTTCCGGGAATGAAGAAGATGCCTTACTGGTGAATAAAGCCCTGGAGCTCGCCAGACATAATGACGCTCACCTGACGTTAATTCATATTGATGATGGCTTAAGCGAGTTGTATCCGGGTATCTACTTCCCTGCAACAGAAGATATTCTTCAATTGTTGAAGAATAAGTCGGATAACAAGCTGTATAAACTGACGAAAAATATTCAATGGCCGAAGACAAAACTGCGTATTGAACGCGGAGAAATGCCGGAAACACTGCTGGAAATTATGCAAAAAGAGCAGTGCGACCTCCTTGTCTGTGGTCATCATCACTCATTTATCAACCGTTTGATGCCGGCATATCGCGGGATGATCAATAAGATGAGTGCGGATTTGCTCATCGTGCCGTTTATCGATAAGTAA", - "dna_sequence_length": 429, - "functions": [ - "stress-induced protein" - ], - "id": "CDS_3851", - "location": [ - [ - "NC_000913", - 4113293, - "+", - 429 - ] - ], - "md5": "ddc5fe4019566cb2156c2654d9cd3fa5", - "parent_gene": "", - "protein_md5": "438a615829ba5eaaf7a6b39401811d6e", - "protein_translation": "MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKEQCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK", - "protein_translation_length": 142, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418359.1" - ], - [ - "gene_synonym", - "EcoGene:EG11518" - ], - [ - "gene_synonym", - "flxR" - ], - [ - "gene_synonym", - "b3924" - ], - [ - "gene_synonym", - "GI:16131762" - ], - [ - "gene_synonym", - "fpr" - ], - [ - "gene_synonym", - "JW3895" - ], - [ - "gene_synonym", - "ECK3916" - ], - [ - "gene_synonym", - "GeneID:948414" - ], - [ - "gene_synonym", - "ASAP:ABE-0012818" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28861" - ] - ], - "dna_sequence": "ATGGCTGATTGGGTAACAGGCAAAGTCACTAAAGTGCAGAACTGGACCGACGCCCTGTTTAGTCTCACCGTTCACGCCCCCGTGCTTCCGTTTACCGCCGGGCAATTTACCAAGCTTGGCCTTGAAATCGACGGCGAACGCGTCCAGCGCGCCTACTCCTATGTAAACTCGCCCGATAATCCCGATCTGGAGTTTTACCTGGTCACCGTCCCCGATGGCAAATTAAGCCCACGACTGGCGGCACTGAAACCAGGCGATGAAGTGCAGGTGGTTAGCGAAGCGGCAGGATTCTTTGTGCTCGATGAAGTGCCGCACTGCGAAACGCTATGGATGCTGGCAACCGGTACAGCGATTGGCCCTTATTTATCGATTCTGCAACTAGGTAAAGATTTAGATCGCTTCAAAAATCTGGTCCTGGTGCACGCCGCACGTTATGCCGCCGACTTAAGCTATTTGCCACTGATGCAGGAACTGGAAAAACGCTACGAAGGAAAACTGCGCATTCAGACGGTGGTCAGTCGGGAAACGGCAGCGGGGTCGCTCACCGGACGGATACCGGCATTAATTGAAAGTGGGGAACTGGAAAGCACGATTGGCCTGCCGATGAATAAAGAAACCAGCCATGTGATGCTGTGCGGCAATCCACAGATGGTGCGCGATACACAACAGTTGCTGAAAGAGACCCGGCAGATGACGAAACATTTACGTCGCCGACCGGGCCATATGACAGCGGAGCATTACTGGTAA", - "dna_sequence_length": 747, - "functions": [ - "ferredoxin-NADP reductase", - "flavodoxin reductase" - ], - "id": "CDS_3852", - "location": [ - [ - "NC_000913", - 4114472, - "-", - 747 - ] - ], - "md5": "82d34d4d81f7f44c1818be4d3f6e8fde", - "parent_gene": "", - "protein_md5": "24d4383590b10e541924f1108f82f3ab", - "protein_translation": "MADWVTGKVTKVQNWTDALFSLTVHAPVLPFTAGQFTKLGLEIDGERVQRAYSYVNSPDNPDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLDEVPHCETLWMLATGTAIGPYLSILQLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEKRYEGKLRIQTVVSRETAAGSLTGRIPALIESGELESTIGLPMNKETSHVMLCGNPQMVRDTQQLLKETRQMTKHLRRRPGHMTAEHYW", - "protein_translation_length": 248, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9C9" - ], - [ - "gene_synonym", - "GeneID:948424" - ], - [ - "gene_synonym", - "glpX" - ], - [ - "gene_synonym", - "b3925" - ], - [ - "gene_synonym", - "GI:16131763" - ], - [ - "gene_synonym", - "EcoGene:EG11517" - ], - [ - "gene_synonym", - "ECK3917" - ], - [ - "gene_synonym", - "JW3896" - ], - [ - "gene_synonym", - "ASAP:ABE-0012821" - ], - [ - "gene_synonym", - "NP_418360.1" - ] - ], - "dna_sequence": "ATGAGACGAGAACTTGCCATCGAATTTTCCCGCGTCACCGAATCAGCGGCGCTGGCTGGCTACAAATGGTTAGGACGCGGCGATAAAAACACCGCGGACGGCGCGGCGGTAAACGCCATGCGTATTATGCTCAACCAGGTCAACATTGACGGCACCATCGTCATTGGTGAAGGTGAAATCGACGAAGCACCGATGCTCTACATTGGTGAAAAAGTCGGTACTGGTCGCGGCGACGCGGTAGATATTGCTGTTGATCCGATTGAAGGCACGCGCATGACGGCGATGGGCCAGGCTAACGCGCTGGCGGTGCTGGCAGTAGGCGATAAAGGCTGCTTCCTCAATGCGCCGGATATGTATATGGAGAAGCTGATTGTCGGGCCGGGAGCCAAAGGCACCATTGATCTGAACCTGCCGCTGGCGGATAACCTGCGCAATGTAGCGGCGGCGCTCGGCAAACCGTTGAGCGAACTGACGGTAACGATTCTGGCTAAACCACGCCACGATGCCGTTATCGCTGAAATGCAGCAACTCGGCGTACGCGTATTTGCTATTCCGGACGGCGACGTTGCGGCCTCAATTCTCACCTGTATGCCAGACAGCGAAGTTGACGTGCTGTACGGTATTGGTGGCGCGCCGGAAGGCGTAGTTTCTGCGGCGGTGATCCGCGCATTAGATGGCGACATGAACGGTCGTCTGCTGGCGCGTCATGACGTCAAAGGCGACAACGAAGAGAATCGTCGCATTGGCGAGCAGGAGCTGGCACGCTGCAAAGCGATGGGCATCGAAGCCGGTAAAGTATTGCGCCTGGGCGATATGGCGCGCAGCGATAACGTCATCTTCTCTGCCACCGGTATTACCAAAGGCGATCTGCTGGAAGGCATTAGCCGCAAAGGCAATATCGCGACTACCGAAACGCTGCTGATCCGCGGCAAGTCACGCACCATTCGCCGCATTCAGTCCATCCACTATCTGGATCGCAAAGACCCGGAAATGCAGGTGCACATCCTCTGA", 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"gene_synonym", - "ASAP:ABE-0012825" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6F3" - ], - [ - "gene_synonym", - "JW3897" - ], - [ - "gene_synonym", - "glpK" - ] - ], - "dna_sequence": "ATGACTGAAAAAAAATATATCGTTGCGCTCGACCAGGGCACCACCAGCTCCCGCGCGGTCGTAATGGATCACGATGCCAATATCATTAGCGTGTCGCAGCGCGAATTTGAGCAAATCTACCCAAAACCAGGTTGGGTAGAACACGACCCAATGGAAATCTGGGCCACCCAAAGCTCCACGCTGGTAGAAGTGCTGGCGAAAGCCGATATCAGTTCCGATCAAATTGCAGCTATCGGTATTACGAACCAGCGTGAAACCACTATTGTCTGGGAAAAAGAAACCGGCAAGCCTATCTATAACGCCATTGTCTGGCAGTGCCGTCGTACCGCAGAAATCTGCGAGCATTTAAAACGTGACGGTTTAGAAGATTATATCCGCAGCAATACCGGTCTGGTGATTGACCCGTACTTTTCTGGCACCAAAGTGAAGTGGATCCTCGACCATGTGGAAGGCTCTCGCGAGCGTGCACGTCGTGGTGAATTGCTGTTTGGTACGGTTGATACGTGGCTTATCTGGAAAATGACTCAGGGCCGTGTCCATGTGACCGATTACACCAACGCCTCTCGTACCATGTTGTTCAACATCCATACCCTGGACTGGGACGACAAAATGCTGGAAGTGCTGGATATTCCGCGCGAGATGCTGCCAGAAGTGCGTCGTTCTTCCGAAGTATACGGTCAGACTAACATTGGCGGCAAAGGCGGCACGCGTATTCCAATCTCCGGGATCGCCGGTGACCAGCAGGCCGCGCTGTTTGGTCAGTTGTGCGTGAAAGAAGGGATGGCGAAGAACACCTATGGCACTGGCTGCTTTATGCTGATGAACACTGGCGAGAAAGCGGTGAAATCAGAAAACGGCCTGCTGACCACCATCGCCTGCGGCCCGACTGGCGAAGTGAACTATGCGTTGGAAGGTGCGGTGTTTATGGCAGGCGCATCCATTCAGTGGCTGCGCGATGAAATGAAGTTGATTAACGACGCCTACGATTCCGAATATTTCGCCACCAAAGTGCAAAACACCAATGGTGTGTATGTGGTTCCGGCATTTACCGGGCTGGGTGCGCCGTACTGGGACCCGTATGCGCGCGGGGCGATTTTCGGTCTGACTCGTGGGGTGAACGCTAACCACATTATACGCGCGACGCTGGAGTCTATTGCTTATCAGACGCGTGACGTGCTGGAAGCGATGCAGGCCGACTCTGGTATCCGTCTGCACGCCCTGCGCGTGGATGGTGGCGCAGTAGCAAACAATTTCCTGATGCAGTTCCAGTCCGATATTCTCGGCACCCGCGTTGAGCGCCCGGAAGTGCGCGAAGTCACCGCATTGGGTGCGGCCTATCTCGCAGGCCTGGCGGTTGGCTTCTGGCAGAACCTCGACGAGCTGCAAGAGAAAGCGGTGATTGAGCGCGAGTTCCGTCCAGGCATCGAAACCACTGAGCGTAATTACCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAA", - "dna_sequence_length": 1509, - "functions": [ - "glycerol kinase" - ], - "id": "CDS_3854", - "location": [ - [ - "NC_000913", - 4117222, - "-", - 1509 - ] - ], - "md5": "568949e04e5cf92d5947e72cc3f9e537", - "parent_gene": "", - "protein_md5": "5209eac880717d0df7e3e72045ac99b9", - "protein_translation": "MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEEHDE", - "protein_translation_length": 502, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948422" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AER0" - ], - [ - "gene_synonym", - "NP_418362.1" - ], - [ - "gene_synonym", - "b3927" - ], - [ - "gene_synonym", - "GI:16131765" - ], - [ - "gene_synonym", - "JW3898" - ], - [ - "gene_synonym", - "ECK3919" - ], - [ - "gene_synonym", - "ASAP:ABE-0012828" - ], - [ - "gene_synonym", - "EcoGene:EG10396" - ], - [ - "gene_synonym", - "glpF" - ] - ], - "dna_sequence": "ATGAGTCAAACATCAACCTTGAAAGGCCAGTGCATTGCTGAATTCCTCGGTACCGGGTTGTTGATTTTCTTCGGTGTGGGTTGCGTTGCAGCACTAAAAGTCGCTGGTGCGTCTTTTGGTCAGTGGGAAATCAGTGTCATTTGGGGACTGGGGGTGGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTATTCCTTTTATCGTTTCACAAGTTGCCGGCGCTTTCTGTGCTGCGGCTTTAGTTTACGGGCTTTACTACAATTTATTTTTCGACTTCGAGCAGACTCATCACATTGTTCGCGGCAGCGTTGAAAGTGTTGATCTGGCTGGCACTTTCTCTACTTACCCTAATCCTCATATCAATTTTGTGCAGGCTTTCGCAGTTGAGATGGTGATTACCGCTATTCTGATGGGGCTGATCCTGGCGTTAACGGACGATGGCAACGGTGTACCACGCGGCCCTTTGGCTCCCTTGCTGATTGGTCTACTGATTGCGGTCATTGGCGCATCTATGGGCCCATTGACAGGTTTTGCCATGAACCCAGCGCGTGACTTCGGTCCGAAAGTCTTTGCCTGGCTGGCGGGCTGGGGCAATGTCGCCTTTACCGGCGGCAGAGACATTCCTTACTTCCTGGTGCCGCTTTTCGGCCCTATCGTTGGCGCGATTGTAGGTGCATTTGCCTACCGCAAACTGATTGGTCGCCATTTGCCTTGCGATATCTGTGTTGTGGAAGAAAAGGAAACCACAACTCCTTCAGAACAAAAAGCTTCGCTGTAA", - "dna_sequence_length": 846, - "functions": [ - "glycerol facilitator" - ], - "id": "CDS_3855", - "location": [ - [ - "NC_000913", - 4118090, - "-", - 846 - ] - ], - "md5": "151d63d7aafbe1def2d95c40249f69ee", - "parent_gene": "", - "protein_md5": "68d36bdf68da9f1e979bef074c6ede8a", - "protein_translation": "MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHLPCDICVVEEKETTTPSEQKASL", - "protein_translation_length": 281, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418363.1" - ], - [ - "gene_synonym", - "ECK3920" - ], - [ - "gene_synonym", - "GeneID:948420" - ], - [ - "gene_synonym", - "GI:16131766" - ], - [ - "gene_synonym", - "zapB" - ], - [ - "gene_synonym", - "JW3899" - ], - [ - "gene_synonym", - "EcoGene:EG11878" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF36" - ], - [ - "gene_synonym", - "yiiU" - ], - [ - "gene_synonym", - "b3928" - ], - [ - "gene_synonym", - "ASAP:ABE-0012835" - ] - ], - "dna_sequence": "ATGACAATGTCATTAGAAGTGTTTGAGAAACTGGAAGCAAAAGTACAGCAGGCGATTGATACCATCACTCTGTTGCAGATGGAAATCGAAGAGCTGAAAGAAAAAAACAACTCACTGTCGCAGGAAGTTCAAAATGCCCAGCATCAGCGCGAAGAGCTGGAGCGTGAGAACAACCATCTGAAAGAACAGCAGAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGA", - "dna_sequence_length": 246, - "functions": [ - "FtsZ stabilizer, septal ring assembly factor, cell division stimulator" - ], - "id": "CDS_3856", - "location": [ - [ - "NC_000913", - 4118515, - "+", - 246 - ] - ], - "md5": "dab98a9ed088cb06d7b019e190e00fa1", - "parent_gene": "", - "protein_md5": "d08945678e24c1ed1ad25fc20c27125f", - "protein_translation": "MTMSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV", - "protein_translation_length": 81, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rraA" - ], - [ - "gene_synonym", - "ECK3921" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8R0" - ], - [ - "gene_synonym", - "JW3900" - ], - [ - "gene_synonym", - "GI:16131767" - ], - [ - "gene_synonym", - "GeneID:948419" - ], - [ - "gene_synonym", - "EcoGene:EG11879" - ], - [ - "gene_synonym", - "NP_418364.1" - ], - [ - "gene_synonym", - "menG" - ], - [ - "gene_synonym", - "b3929" - ], - [ - "gene_synonym", - "ASAP:ABE-0012837" - ], - [ - "gene_synonym", - "yiiV" - ] - ], - "dna_sequence": "ATGAAATACGATACTTCCGAGCTTTGTGACATCTATCAAGAAGATGTTAACGTCGTGGAACCGCTGTTCTCCAACTTTGGCGGACGGGCGTCGTTTGGCGGACAAATAATCACGGTAAAATGTTTCGAGGACAACGGGTTGCTGTACGATCTGCTCGAACAGAATGGCCGTGGTCGTGTTCTTGTCGTCGATGGCGGTGGTTCTGTTCGTCGCGCACTGGTCGATGCTGAACTGGCGCGTCTGGCAGTACAAAATGAATGGGAAGGTCTGGTCATTTACGGCGCGGTGCGTCAGGTAGATGACCTGGAAGAGTTGGATATCGGCATCCAGGCGATGGCGGCAATTCCGGTTGGTGCCGCTGGCGAAGGCATTGGCGAAAGCGATGTCCGCGTCAATTTTGGCGGTGTCACCTTCTTCTCCGGCGACCATCTTTATGCCGACAATACCGGGATTATTCTTTCAGAAGATCCGCTGGATATTGAATGA", - "dna_sequence_length": 486, - "functions": [ - "ribonuclease E (RNase E) inhibitor protein" - ], - "id": "CDS_3857", - "location": [ - [ - "NC_000913", - 4119330, - "-", - 486 - ] - ], - "md5": "3d12285a840a9a67f456c344aa0e1e35", - "parent_gene": "", - "protein_md5": "09de6da6b58575e022e59620ac8a4c4e", - "protein_translation": "MKYDTSELCDIYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDIE", - "protein_translation_length": 161, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3922" - ], - [ - "gene_synonym", - "ASAP:ABE-0012841" - ], - [ - "gene_synonym", - "JW3901" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32166" - ], - [ - "gene_synonym", - "EcoGene:EG11880" - ], - [ - "gene_synonym", - "GI:16131768" - ], - [ - "gene_synonym", - "b3930" - ], - [ - "gene_synonym", - "GeneID:948418" - ], - [ - "gene_synonym", - "NP_418365.1" - ], - [ - "gene_synonym", - "menA" - ], - [ - "gene_synonym", - "yiiW" - ] - ], - "dna_sequence": "ATGACTGAACAACAAATTAGCCGAACTCAGGCGTGGCTGGAAAGTTTACGACCTAAAACCCTCCCCCTCGCCTTTGCTGCAATTATCGTCGGGACAGCGCTGGCATGGTGGCAAGGTCACTTCGATCCGCTGGTCGCCCTGCTGGCACTAATTACCGCCGGGCTATTACAGATCCTTTCTAACCTCGCCAATGATTACGGCGATGCGGTAAAAGGCAGCGATAAACCTGACCGCATTGGGCCGCTACGCGGCATGCAAAAAGGGGTCATTACCCAGCAAGAGATGAAACGGGCGCTCATTATTACCGTCGTGCTCATCTGTCTCTCCGGGCTGGCACTGGTTGCAGTGGCATGCCATACGCTGGCCGATTTTGTCGGTTTCCTGATTCTTGGCGGGTTGTCGATCATTGCCGCTATCACCTACACCGTGGGCAATCGTCCTTATGGTTATATCGGTCTGGGTGATATTTCCGTACTGGTTTTCTTTGGCTGGTTGAGTGTCATGGGGAGCTGGTATTTACAGGCTCATACATTGATTCCGGCACTGATCCTTCCGGCGACCGCATGCGGCCTGCTGGCAACGGCAGTACTGAATATTAATAACCTGCGTGATATCAATAGCGACCGCGAAAATGGCAAAAACACGCTGGTGGTGCGCTTAGGTGAAGTGAACGCGCGTCGTTATCATGCCTGCCTGCTGATGGGCTCGCTGGTGTGTCTGGCGCTGTTTAATCTCTTTTCGCTGCATAGCCTGTGGGGCTGGCTGTTCCTGCTGGCGGCACCATTACTGGTGAAGCAAGCCCGTTATGTGATGCGGGAAATGGACCCGGTGGCGATGCGACCAATGCTGGAACGTACTGTCAAGGGAGCGTTACTGACTAACCTGCTGTTTGTTTTAGGGATATTCCTAAGCCAGTGGGCAGCATAA", - "dna_sequence_length": 927, - "functions": [ - "1,4-dihydroxy-2-naphthoate octaprenyltransferase" - ], - "id": "CDS_3858", - "location": [ - [ - "NC_000913", - 4120349, - "-", - 927 - ] - ], - "md5": "35ced9a22b360041910e05303675362d", - "parent_gene": "", - "protein_md5": "11479371a3ebfb9010278baf71307750", - "protein_translation": "MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPLVALLALITAGLLQILSNLANDYGDAVKGSDKPDRIGPLRGMQKGVITQQEMKRALIITVVLICLSGLALVAVACHTLADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLVFFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLVVRLGEVNARRYHACLLMGSLVCLALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDPVAMRPMLERTVKGALLTNLLFVLGIFLSQWAA", - "protein_translation_length": 308, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "clpY" - ], - [ - "gene_synonym", - "GeneID:948430" - ], - [ - "gene_synonym", - "ECK3923" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6H5" - ], - [ - "gene_synonym", - "ASAP:ABE-0012843" - ], - [ - "gene_synonym", - "NP_418366.1" - ], - [ - "gene_synonym", - "JW3902" - ], - [ - "gene_synonym", - "htpI" - ], - [ - "gene_synonym", - "EcoGene:EG11881" - ], - [ - "gene_synonym", - "hslU" - ], - [ - "gene_synonym", - "b3931" - ], - [ - "gene_synonym", - "GI:16131769" - ] - ], - "dna_sequence": "ATGTCTGAAATGACCCCACGCGAAATCGTCAGCGAACTGGATAAGCACATCATCGGCCAGGACAACGCCAAGCGTTCTGTGGCGATTGCTCTGCGTAACCGCTGGCGTCGCATGCAGCTCAACGAAGAGCTGCGCCATGAAGTGACCCCGAAAAATATCCTGATGATCGGCCCGACCGGTGTCGGTAAAACTGAAATCGCCCGTCGTCTGGCTAAGCTGGCGAATGCGCCGTTCATCAAAGTTGAAGCGACCAAATTCACCGAAGTGGGCTACGTCGGTAAGGAAGTGGATTCTATTATTCGCGATCTGACCGATGCCGCCGTGAAAATGGTACGCGTCCAGGCTATCGAGAAAAACCGTTATCGCGCTGAAGAACTGGCAGAAGAACGTATTCTCGACGTGCTGATCCCACCTGCTAAAAACAACTGGGGACAGACCGAACAGCAGCAGGAACCGTCCGCTGCTCGTCAGGCATTCCGCAAAAAACTGCGTGAAGGCCAGCTTGATGACAAAGAAATCGAGATCGATCTTGCCGCAGCACCGATGGGCGTTGAAATTATGGCTCCTCCGGGCATGGAAGAGATGACCAGCCAGCTGCAGTCCATGTTCCAGAACCTGGGCGGCCAGAAGCAAAAAGCGCGTAAGCTGAAAATCAAAGACGCCATGAAGCTGCTGATTGAAGAAGAAGCGGCGAAACTGGTGAACCCGGAAGAGCTGAAGCAAGACGCTATCGACGCTGTTGAGCAGCACGGGATCGTGTTTATCGACGAAATCGACAAAATCTGTAAGCGCGGCGAGTCTTCCGGTCCGGATGTTTCTCGTGAAGGCGTTCAGCGTGACCTGCTGCCGCTGGTAGAAGGTTGCACCGTTTCCACCAAACACGGGATGGTCAAAACTGACCACATTCTGTTTATCGCTTCTGGCGCGTTCCAGATTGCGAAACCGTCTGACCTGATCCCGGAACTGCAAGGTCGTCTGCCAATCCGCGTTGAACTGCAGGCGCTGACCACCAGCGACTTCGAGCGTATTCTGACCGAGCCGAATGCCTCTATCACCGTGCAGTACAAAGCACTGATGGCGACTGAAGGCGTAAATATCGAGTTTACCGACTCCGGTATTAAACGCATCGCGGAAGCGGCATGGCAGGTGAACGAATCTACCGAAAACATCGGTGCTCGTCGTTTACACACTGTTCTGGAGCGTTTAATGGAAGAGATTTCCTACGACGCCAGCGATTTAAGCGGTCAAAATATCACTATTGACGCAGATTATGTGAGCAAACATCTGGATGCGTTGGTGGCAGATGAAGATCTGAGCCGTTTTATCCTATAA", 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"gene_synonym", - "yiiC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7B8" - ], - [ - "gene_synonym", - "JW3903" - ], - [ - "gene_synonym", - "NP_418367.1" - ], - [ - "gene_synonym", - "GI:16131770" - ], - [ - "gene_synonym", - "EcoGene:EG11676" - ], - [ - "gene_synonym", - "b3932" - ], - [ - "gene_synonym", - "hslV" - ], - [ - "gene_synonym", - "htpO" - ], - [ - "gene_synonym", - "ASAP:ABE-0012845" - ] - ], - "dna_sequence": "GTGACAACTATAGTAAGCGTACGCCGTAACGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTGCGGGCGGTACTGCGGATGCTTTTACGCTGTTCGAACTGTTTGAACGTAAACTGGAAATGCATCAGGGCCATCTGGTCAAAGCCGCCGTTGAGCTGGCAAAAGACTGGCGTACCGATCGCATGCTGCGCAAACTTGAAGCACTGCTGGCAGTCGCGGATGAAACTGCATCGCTTATCATCACCGGTAACGGTGACGTGGTGCAGCCAGAAAACGATCTTATTGCTATCGGCTCCGGCGGCCCTTACGCCCAGGCTGCGGCGCGCGCGCTGTTAGAAAACACTGAACTTAGCGCCCGTGAAATTGCTGAAAAGGCGTTGGATATTGCAGGCGACATTTGCATCTATACCAACCATTTCCACACCATCGAAGAATTAAGCTACAAAGCGTAA", - "dna_sequence_length": 531, - "functions": [ - "peptidase component of the HslUV protease" - ], - "id": "CDS_3860", - "location": [ - [ - "NC_000913", - 4122287, - "-", - 531 - ] - ], - "md5": "5c7ef087b11ad4481233ebd71e7bb7f1", - "parent_gene": "", - "protein_md5": "bd628120a237ee4e5d7552d98e2ea191", - "protein_translation": "MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVIAGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDICIYTNHFHTIEELSYKA", - "protein_translation_length": 176, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3925" - ], - [ - "gene_synonym", - "NP_418368.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012850" - ], - [ - "gene_synonym", - "ftsN" - ], - [ - "gene_synonym", - "GeneID:948428" - ], - [ - "gene_synonym", - "JW3904" - ], - [ - "gene_synonym", - "GI:16131771" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P29131" - ], - [ - "gene_synonym", - "msgA" - ], - [ - "gene_synonym", - "b3933" - ], - [ - "gene_synonym", - "EcoGene:EG11529" - ] - ], - "dna_sequence": "GTGGCACAACGAGATTATGTACGCCGCAGCCAACCGGCACCTTCGCGGCGAAAAAAGAGCACCTCACGGAAAAAGCAACGAAATCTGCCTGCGGTTTCTCCCGCTATGGTCGCTATTGCTGCCGCCGTTCTTGTGACCTTTATCGGTGGTCTGTACTTCATTACGCATCACAAGAAAGAAGAGTCCGAGACGCTGCAAAGCCAGAAAGTGACCGGAAACGGACTACCACCAAAACCAGAAGAACGCTGGCGCTACATTAAAGAGCTGGAAAGTCGCCAGCCGGGAGTGCGTGCGCCCACAGAACCTTCTGCCGGTGGTGAAGTGAAAACGCCGGAGCAACTGACACCAGAACAACGTCAGCTTCTTGAACAAATGCAGGCTGATATGCGCCAGCAGCCAACGCAGCTGGTTGAAGTTCCGTGGAATGAACAGACGCCGGAACAGCGTCAGCAAACGCTACAGCGCCAACGTCAGGCGCAGCAATTAGCGGAACAGCAACGCCTGGCTCAGCAGTCGCGTACGACTGAACAAAGCTGGCAGCAGCAGACGCGTACGTCGCAAGCCGCACCGGTACAGGCGCAACCGCGCCAGTCTAAACCGGCTTCTTCTCAGCAGCCGTACCAGGATCTGCTGCAAACTCCTGCGCACACGACTGCGCAGTCGAAGCCGCAGCAAGCTGCGCCAGTTGCTCGTGCCGCTGACGCGCCAAAACCGACGGCGGAGAAAAAAGACGAACGCCGCTGGATGGTGCAGTGCGGTTCGTTCAGAGGCGCGGAACAGGCAGAGACGGTACGTGCTCAGCTGGCGTTCGAAGGCTTTGACTCGAAAATCACCACCAACAATGGCTGGAATCGTGTGGTCATTGGCCCGGTGAAAGGCAAAGAGAACGCAGACAGCACCCTCAATCGGTTGAAGATGGCGGGTCATACAAACTGCATTCGGCTCGCCGCCGGGGGTTGA", - "dna_sequence_length": 960, - "functions": [ - "essential cell division protein" - ], - "id": "CDS_3861", - "location": [ - [ - "NC_000913", - 4123339, - "-", - 960 - ] - ], - "md5": "6c0d15feb5826a3f5e5c6ab8ef170774", - "parent_gene": "", - "protein_md5": "670ff182e4602682eb9dd5ea2320b1ac", - "protein_translation": "MAQRDYVRRSQPAPSRRKKSTSRKKQRNLPAVSPAMVAIAAAVLVTFIGGLYFITHHKKEESETLQSQKVTGNGLPPKPEERWRYIKELESRQPGVRAPTEPSAGGEVKTPEQLTPEQRQLLEQMQADMRQQPTQLVEVPWNEQTPEQRQQTLQRQRQAQQLAEQQRLAQQSRTTEQSWQQQTRTSQAAPVQAQPRQSKPASSQQPYQDLLQTPAHTTAQSKPQQAAPVARAADAPKPTAEKKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG", - "protein_translation_length": 319, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3926" - ], - [ - "gene_synonym", - "GeneID:948427" - ], - [ - "gene_synonym", - "JW3905" - ], - [ - "gene_synonym", - "ASAP:ABE-0012853" - ], - [ - "gene_synonym", - "b3934" - ], - [ - "gene_synonym", - "GI:16131772" - ], - [ - "gene_synonym", - "NP_418369.1" - ], - [ - "gene_synonym", - "cytR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACN7" - ], - [ - "gene_synonym", - "EcoGene:EG10200" - ] - ], - "dna_sequence": "GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTCCCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATTTACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCCTTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCATCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGCTGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCGGCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTTGATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCAGGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGACAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTTGGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA", 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"gene_synonym", - "JW3906" - ], - [ - "gene_synonym", - "ASAP:ABE-0012860" - ], - [ - "gene_synonym", - "GI:16131773" - ], - [ - "gene_synonym", - "b3935" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P17888" - ], - [ - "gene_synonym", - "srgA" - ] - ], - "dna_sequence": "ATGCCCGTTGCCCACGTTGCCTTGCCCGTTCCGCTTCCTCGTACCTTTGACTATCTGCTGCCAGAAGGCATGACGGTTAAAGCTGGGTGTCGCGTGCGCGTGCCGTTTGGCAAACAGCAGGAGCGCATCGGGATTGTGGTATCAGTTAGCGATGCCAGCGAACTGCCGCTCAATGAGCTAAAAGCGGTAGTCGAAGTGCTGGATAGTGAGCCGGTGTTTACTCACTCCGTCTGGCGATTGCTGCTATGGGCGGCAGATTACTATCATCATCCGATTGGCGATGTGCTGTTTCATGCCTTGCCGATTTTACTACGCCAGGGGCGGCCTGCGGCGAACGCGCCGATGTGGTACTGGTTTGCCACTGAACAAGGCCAGGCGGTGGATCTGAACAGCCTGAAACGCTCCCCCAAGCAACAACAGGCGCTGGCGGCGTTACGGCAAGGCAAAATCTGGCGCGACCAGGTCGCCACGCTCGAATTTAATGATGCCGCGTTGCAGGCGCTACGCAAAAAAGGTCTGTGTGATTTAGCAAGTGAAACACCAGAGTTTAGCGACTGGCGAACGAACTATGCCGTTTCTGGTGAGCGGTTGCGATTGAATACCGAACAGGCCACCGCCGTTGGCGCAATTCATAGCGCGGCAGATACTTTTTCTGCCTGGCTGCTGGCGGGCGTTACCGGTTCCGGTAAAACGGAGGTTTATCTCAGCGTACTGGAAAACGTGCTCGCTCAGGGCAAACAGGCGCTGGTGATGGTGCCGGAAATCGGCCTGACACCGCAAACTATCGCCCGTTTTCGTGAACGTTTTAATGCCCCCGTGGAAGTTCTGCATTCCGGCCTGAACGACAGCGAGCGTCTTTCGGCGTGGCTGAAAGCGAAAAATGGTGAGGCGGCGATTGTGATCGGCACCCGCTCCGCGCTGTTTACGCCGTTTAAAAATCTCGGCGTGATTGTCATTGATGAAGAGCACGACAGCTCCTACAAGCAGCAGGAAGGCTGGCGCTATCATGCCCGCGACCTGGCGGTGTATCGTGCGCACAGCGAGCAAATCCCGATTATTCTTGGCTCCGCAACGCCCGCGCTGGAAACGTTATGCAACGTCCAGCAGAAAAAATACCGCCTGCTGCGCCTGACCCGTCGGGCAGGGAATGCGCGTCCGGCAATTCAACATGTGCTGGATTTAAAAGGTCAGAAGGTGCAGGCAGGTCTGGCTCCGGCGTTAATCACTCGTATGCGCCAGCATTTACAGGCTGATAACCAGGTCATTCTCTTTCTTAACCGCCGTGGCTTTGCGCCTGCACTGCTGTGCCACGACTGTGGCTGGATTGCCGAATGCCCACGTTGCGATCACTACTACACGCTGCATCAGGCGCAGCACCATCTGCGCTGCCACCACTGTGACAGTCAGCGTCCGGTGCCGCGCCAGTGCCCTTCCTGCGGTTCCACGCACCTGGTCCCCGTGGGGCTGGGCACCGAACAGCTTGAACAGACGCTCGCGCCGTTGTTCCCCGGCGTGCCCATTTCTCGTATCGACCGCGATACCACCAGCCGCAAAGGGGCGCTGGAACAGCAACTGGCAGAAGTACATCGCGGCGGCGCGCGGATTTTGATTGGTACACAAATGCTGGCGAAAGGTCACCATTTCCCGGATGTGACGCTGGTTGCATTACTGGACGTGGACGGCGCGCTGTTTTCTGCCGATTTTCGCTCGGCAGAGCGTTTCGCTCAGCTTTACACCCAGGTCGCCGGTCGTGCCGGGCGTGCGGGTAAACAGGGCGAAGTGGTGCTGCAAACGCACCATCCGGAACATCCTCTGTTGCAAACGTTGCTCTATAAAGGCTACGACGCCTTTGCCGAACAGGCGCTGGCTGAGCGGCGAATGATGCAGCTACCGCCGTGGACCAGCCATGTGATTGTGCGTGCGGAAGATCATAACAATCAGCACGCGCCATTGTTCCTGCAACAACTGCGTAATCTGATCCTCTCCAGCCCACTGGCAGACGAGAAACTGTGGGTTCTCGGTCCGGTTCCGGCTCTGGCACCTAAACGTGGCGGTCGCTGGCGCTGGCAGATATTGTTGCAGCACCCTTCCCGCGTGCGCTTGCAACACATCATTAACGGTACGCTGGCGCTCATCAATACAATACCGGATTCCCGTAAGGTGAAATGGGTGCTGGATGTTGATCCGATTGAGGGTTAA", 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"MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIEG", - "protein_translation_length": 732, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10889" - ], - [ - "gene_synonym", - "NP_418371.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7M9" - ], - [ - "gene_synonym", - "JW3907" - ], - [ - "gene_synonym", - "GeneID:948425" - ], - [ - "gene_synonym", - "ECK3928" - ], - [ - "gene_synonym", - "b3936" - ], - [ - "gene_synonym", - "GI:16131774" - ], - [ - "gene_synonym", - "ASAP:ABE-0012867" - ], - [ - "gene_synonym", - "rpmE" - ] - ], - "dna_sequence": "ATGAAAAAAGATATTCACCCGAAATACGAAGAAATTACTGCTAGCTGCTCTTGCGGTAACGTAATGAAAATCCGCTCCACCGTTGGTCATGACCTGAACCTCGACGTGTGCAGCAAGTGCCACCCGTTCTTCACTGGCAAACAGCGTGATGTTGCTACCGGTGGCCGTGTTGACCGCTTCAACAAGCGTTTCAACATCCCGGGCAGCAAATAA", - "dna_sequence_length": 213, - "functions": [ - "50S ribosomal subunit protein L31" - ], - "id": "CDS_3864", - "location": [ - [ - "NC_000913", - 4127013, - "+", - 213 - ] - ], - "md5": "b366f0c3b4c05cb02ee7dda56631c588", - "parent_gene": "", - "protein_md5": "091bb03c9d1e8734ac0da1ad6ed169e2", - "protein_translation": "MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK", - "protein_translation_length": 70, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3937" - ], - [ - "gene_synonym", - "EcoGene:EG11882" - ], - [ - "gene_synonym", - "JW3908" - ], - [ - "gene_synonym", - "GeneID:948436" - ], - [ - "gene_synonym", - "ECK3929" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32167" - ], - [ - "gene_synonym", - "yiiX" - ], - [ - "gene_synonym", - "NP_418372.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012869" - ], - [ - "gene_synonym", - "GI:16131775" - ] - ], - "dna_sequence": "ATGAAAAACAGGCTGCTGATCCTCAGCCTGCTGGTTTCTGTACCTGCCTTTGCCTGGCAGCCACAAACCGGCGACATCATCTTTCAGATCTCTCGCTCATCGCAAAGTAAAGCGATCCAACTGGCGACCCATACCGATTATAGCCACACCGGTATGCTGGTGATACGCAACAAAAAGCCCTACGTTTTTGAAGCAGTCGGCCCGGTGAAATACACCCCGCTCAAGCAGTGGATCGCCCATGGTGAAAAGGGCAAATACGTTGTTCGCCGCGTTGAAGGCGGACTGAGTGTTGAACAACAGCAAAAACTGGCGCAAACGGCAAAACGTTATCTCGGTAAACCGTATGATTTCAGCTTCTCATGGAGCGACGATCGCCAGTACTGTTCGGAAGTGGTGTGGAAGGTTTACCAGAACGCGCTGGGAATGCGCGTGGGCGAGCAGCAGAAGTTGAAAGAGTTCGACCTGAGCAGCCCACAAGTTCAGGCAAAGCTCAAAGAACGTTACGGCAAGAATATTCCGCTTGAGGAAACGGTGGTCTCGCCACAAGCCGTTTTCGATGCGCCACAACTCACCACGGTCGCCAAAGAATGGCCGCTGTTTTCGTGGTAA", - "dna_sequence_length": 609, - "functions": [ - "putative lipid binding hydrolase, DUF830 family protein" - ], - "id": "CDS_3865", - "location": [ - [ - "NC_000913", - 4127894, - "-", - 609 - ] - ], - "md5": "2da295556f45a87638539902fb967052", - "parent_gene": "", - "protein_md5": "0af7e31a18234f965060b62674d30a37", - "protein_translation": "MKNRLLILSLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATHTDYSHTGMLVIRNKKPYVFEAVGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSSPQVQAKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLFSW", - "protein_translation_length": 202, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948435" - ], - [ - "gene_synonym", - "JW3909" - ], - [ - "gene_synonym", - "ASAP:ABE-0012874" - ], - [ - "gene_synonym", - "NP_418373.1" - ], - [ - "gene_synonym", - "EcoGene:EG10588" - ], - [ - "gene_synonym", - "GI:16131776" - ], - [ - "gene_synonym", - "metJ" - ], - [ - "gene_synonym", - "ECK3930" - ], - [ - "gene_synonym", - "b3938" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8U6" - ] - ], - "dna_sequence": "ATGGCTGAATGGAGCGGCGAATATATCAGCCCATACGCTGAGCACGGCAAGAAGAGTGAACAAGTCAAAAAGATTACGGTTTCCATTCCTCTTAAGGTGTTAAAAATCCTCACCGATGAACGCACGCGTCGTCAGGTGAACAACCTGCGTCACGCTACCAACAGCGAGCTGCTGTGCGAAGCGTTTCTGCATGCCTTTACCGGGCAACCTTTGCCGGATGATGCCGATCTGCGTAAAGAGCGCAGCGACGAAATCCCGGAAGCGGCAAAAGAGATCATGCGTGAGATGGGGATTAACCCGGAGACGTGGGAATACTAA", - "dna_sequence_length": 318, - "functions": [ - "transcriptional repressor, S-adenosylmethionine-binding" - ], - "id": "CDS_3866", - "location": [ - [ - "NC_000913", - 4128395, - "-", - 318 - ] - ], - "md5": "e0df61c56f660f55dd971d77193c3827", - "parent_gene": "", - "protein_md5": "779729355b39f0a9064b8cd257dc0f03", - "protein_translation": "MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY", - "protein_translation_length": 105, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3910" - ], - [ - "gene_synonym", - "GeneID:948434" - ], - [ - "gene_synonym", - "met-1" - ], - [ - "gene_synonym", - "metB" - ], - [ - "gene_synonym", - "ASAP:ABE-0012887" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00935" - ], - [ - "gene_synonym", - "GI:16131777" - ], - [ - "gene_synonym", - "ECK3931" - ], - [ - "gene_synonym", - "NP_418374.1" - ], - [ - "gene_synonym", - "EcoGene:EG10582" - ], - [ - "gene_synonym", - "b3939" - ] - ], - "dna_sequence": "ATGACGCGTAAACAGGCCACCATCGCAGTGCGTAGCGGGTTAAATGACGACGAACAGTATGGTTGCGTTGTCCCACCGATCCATCTTTCCAGCACCTATAACTTTACCGGATTTAATGAACCGCGCGCGCATGATTACTCGCGTCGCGGCAACCCAACGCGCGATGTGGTTCAGCGTGCGCTGGCAGAACTGGAAGGTGGTGCTGGTGCAGTACTTACTAATACCGGCATGTCCGCGATTCACCTGGTAACGACCGTCTTTTTGAAACCTGGCGATCTGCTGGTTGCGCCGCACGACTGCTACGGCGGTAGCTATCGCCTGTTCGACAGTCTGGCGAAACGCGGTTGCTATCGCGTGTTGTTTGTTGATCAAGGCGATGAACAGGCATTACGGGCAGCGCTGGCAGAAAAACCCAAACTGGTACTGGTAGAAAGCCCAAGTAATCCATTGTTACGCGTCGTGGATATTGCGAAAATCTGCCATCTGGCAAGGGAAGTCGGGGCGGTGAGCGTGGTGGATAACACCTTCTTAAGCCCGGCATTACAAAATCCGCTGGCATTAGGTGCCGATCTGGTGTTGCATTCATGCACGAAATATCTGAACGGTCACTCAGACGTAGTGGCCGGCGTGGTGATTGCTAAAGACCCGGACGTTGTCACTGAACTGGCCTGGTGGGCAAACAATATTGGCGTGACGGGCGGCGCGTTTGACAGCTATCTGCTGCTACGTGGGTTGCGAACGCTGGTGCCGCGTATGGAGCTGGCGCAGCGCAACGCGCAGGCGATTGTGAAATACCTGCAAACCCAGCCGTTGGTGAAAAAACTGTATCACCCGTCGTTGCCGGAAAATCAGGGGCATGAAATTGCCGCGCGCCAGCAAAAAGGCTTTGGCGCAATGTTGAGTTTTGAACTGGATGGCGATGAGCAGACGCTGCGTCGTTTCCTGGGCGGGCTGTCGTTGTTTACGCTGGCGGAATCATTAGGGGGAGTGGAAAGTTTAATCTCTCACGCCGCAACCATGACACATGCAGGCATGGCACCAGAAGCGCGTGCTGCCGCCGGGATCTCCGAGACGCTGCTGCGTATCTCCACCGGTATTGAAGATGGCGAAGATTTAATTGCCGACCTGGAAAATGGCTTCCGGGCTGCAAACAAGGGGTAA", 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"UniProtKB/Swiss-Prot:P00562" - ], - [ - "gene_synonym", - "ASAP:ABE-0012889" - ], - [ - "gene_synonym", - "GI:16131778" - ], - [ - "gene_synonym", - "EcoGene:EG10590" - ], - [ - "gene_synonym", - "ECK3932" - ], - [ - "gene_synonym", - "metL" - ], - [ - "gene_synonym", - "metM" - ] - ], - "dna_sequence": "ATGAGTGTGATTGCGCAGGCAGGGGCGAAAGGTCGTCAGCTGCATAAATTTGGTGGCAGTAGTCTGGCTGATGTGAAGTGTTATTTGCGTGTCGCGGGCATTATGGCGGAGTACTCTCAGCCTGACGATATGATGGTGGTTTCCGCCGCCGGTAGCACCACTAACCAGTTGATTAACTGGTTGAAACTAAGCCAGACCGATCGTCTCTCTGCGCATCAGGTTCAACAAACGCTGCGTCGCTATCAGTGCGATCTGATTAGCGGTCTGCTACCCGCTGAAGAAGCCGATAGCCTCATTAGCGCTTTTGTCAGCGACCTTGAGCGCCTGGCGGCGCTGCTCGACAGCGGTATTAACGACGCAGTGTATGCGGAAGTGGTGGGCCACGGGGAAGTATGGTCGGCACGTCTGATGTCTGCGGTACTTAATCAACAAGGGCTGCCAGCGGCCTGGCTTGATGCCCGCGAGTTTTTACGCGCTGAACGCGCCGCACAACCGCAGGTTGATGAAGGGCTTTCTTACCCGTTGCTGCAACAGCTGCTGGTGCAACATCCGGGCAAACGTCTGGTGGTGACCGGATTTATCAGCCGCAACAACGCCGGTGAAACGGTGCTGCTGGGGCGTAACGGTTCCGACTATTCCGCGACACAAATCGGTGCGCTGGCGGGTGTTTCTCGCGTAACCATCTGGAGCGACGTCGCCGGGGTATACAGTGCCGACCCGCGTAAAGTGAAAGATGCCTGCCTGCTGCCGTTGCTGCGTCTGGATGAGGCCAGCGAACTGGCGCGCCTGGCGGCTCCCGTTCTTCACGCCCGTACTTTACAGCCGGTTTCTGGCAGCGAAATCGACCTGCAACTGCGCTGTAGCTACACGCCGGATCAAGGTTCCACGCGCATTGAACGCGTGCTGGCCTCCGGTACTGGTGCGCGTATTGTCACCAGCCACGATGATGTCTGTTTGATTGAGTTTCAGGTGCCCGCCAGTCAGGATTTCAAACTGGCGCATAAAGAGATCGACCAAATCCTGAAACGCGCGCAGGTACGCCCGCTGGCGGTTGGCGTACATAACGATCGCCAGTTGCTGCAATTTTGCTACACCTCAGAAGTGGCCGACAGTGCGCTGAAAATCCTCGACGAAGCGGGATTACCTGGCGAACTGCGCCTGCGTCAGGGGCTGGCGCTGGTGGCGATGGTCGGTGCAGGCGTCACCCGTAACCCGCTGCATTGCCACCGCTTCTGGCAGCAACTGAAAGGCCAGCCGGTCGAATTTACCTGGCAGTCCGATGACGGCATCAGCCTGGTGGCAGTACTGCGCACCGGCCCGACCGAAAGCCTGATTCAGGGGCTGCATCAGTCCGTCTTCCGCGCAGAAAAACGCATCGGCCTGGTATTGTTCGGTAAGGGCAATATCGGTTCCCGTTGGCTGGAACTGTTCGCCCGTGAGCAGAGCACGCTTTCGGCACGTACCGGCTTTGAGTTTGTGCTGGCAGGTGTGGTGGACAGCCGCCGCAGCCTGTTGAGCTATGACGGGCTGGACGCCAGCCGCGCGTTAGCCTTCTTCAACGATGAAGCGGTTGAGCAGGATGAAGAGTCGTTGTTCCTGTGGATGCGCGCCCATCCGTATGATGATTTAGTGGTGCTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCCACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGATCTTCTCCGGCACGCTCTCCTGGCTGTTCCTGCAATTCGACGGTAGCGTGCCGTTTACCGAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTACGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGTGCTGCGCTACGTGGCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGCGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAA", 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"MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDMMVVSAAGSTTNQLINWLKLSQTDRLSAHQVQQTLRRYQCDLISGLLPAEEADSLISAFVSDLERLAALLDSGINDAVYAEVVGHGEVWSARLMSAVLNQQGLPAAWLDAREFLRAERAAQPQVDEGLSYPLLQQLLVQHPGKRLVVTGFISRNNAGETVLLGRNGSDYSATQIGALAGVSRVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPVSGSEIDLQLRCSYTPDQGSTRIERVLASGTGARIVTSHDDVCLIEFQVPASQDFKLAHKEIDQILKRAQVRPLAVGVHNDRQLLQFCYTSEVADSALKILDEAGLPGELRLRQGLALVAMVGAGVTRNPLHCHRFWQQLKGQPVEFTWQSDDGISLVAVLRTGPTESLIQGLHQSVFRAEKRIGLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYDGLDASRALAFFNDEAVEQDEESLFLWMRAHPYDDLVVLDVTASQQLADQYLDFASHGFHVISANKLAGASDSNKYRQIHDAFEKTGRHWLYNATVGAGLPINHTVRDLIDSGDTILSISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLTEPDPRDDLSGKDVMRKLVILAREAGYNIEPDQVRVESLVPAHCEGGSIDHFFENGDELNEQMVQRLEAAREMGLVLRYVARFDANGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAIQSDINRLAQLL", - "protein_translation_length": 810, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3913" - ], - [ - "gene_synonym", - "b3941" - ], - [ - "gene_synonym", - "NP_418376.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEZ1" - ], - [ - "gene_synonym", - "EcoGene:EG10585" - ], - [ - "gene_synonym", - "GeneID:948432" - ], - [ - "gene_synonym", - "metF" - ], - [ - "gene_synonym", - "GI:16131779" - ], - [ - "gene_synonym", - "ECK3933" - ], - [ - "gene_synonym", - "ASAP:ABE-0012897" - ] - ], - "dna_sequence": "ATGAGCTTTTTTCACGCCAGCCAGCGGGATGCCCTGAATCAGAGCCTGGCAGAAGTCCAGGGGCAGATTAACGTTTCGTTCGAGTTTTTCCCGCCGCGTACCAGTGAAATGGAGCAGACCCTGTGGAACTCCATCGATCGCCTTAGCAGCCTGAAACCGAAGTTTGTATCGGTGACCTATGGCGCGAACTCCGGCGAGCGCGACCGTACGCACAGCATTATTAAAGGCATTAAAGATCGCACTGGTCTGGAAGCGGCACCGCATCTTACTTGCATTGATGCGACGCCCGACGAGCTGCGCACCATTGCACGCGACTACTGGAATAACGGTATTCGTCATATCGTGGCGCTGCGTGGCGATCTGCCGCCGGGAAGTGGTAAGCCAGAAATGTATGCTTCTGACCTGGTGACGCTGTTAAAAGAAGTGGCAGATTTCGATATCTCCGTGGCGGCGTATCCGGAAGTTCACCCGGAAGCAAAAAGCGCTCAGGCGGATTTGCTTAATCTGAAACGCAAAGTGGATGCCGGAGCCAACCGCGCGATTACTCAGTTCTTCTTCGATGTCGAAAGCTACCTGCGTTTTCGTGACCGCTGTGTATCGGCGGGCATTGATGTGGAAATTATTCCGGGAATTTTGCCGGTATCTAACTTTAAACAGGCGAAGAAATTTGCCGATATGACCAACGTGCGTATTCCGGCGTGGATGGCGCAAATGTTCGACGGTCTGGATGATGATGCCGAAACCCGCAAACTGGTTGGCGCGAATATTGCCATGGATATGGTGAAGATTTTAAGCCGTGAAGGAGTGAAAGATTTCCACTTCTATACGCTTAACCGTGCTGAAATGAGTTACGCGATTTGCCATACGCTGGGGGTTCGACCTGGTTTATAA", - "dna_sequence_length": 891, - "functions": [ - "5,10-methylenetetrahydrofolate reductase" - ], - "id": "CDS_3869", - "location": [ - [ - "NC_000913", - 4132616, - "+", - 891 - ] - ], - "md5": "6acc8f7bd7fd25bb42660ca1aa839048", - "parent_gene": "", - "protein_md5": "82423f46160b9ea3f63b799b4179fdac", - "protein_translation": "MSFFHASQRDALNQSLAEVQGQINVSFEFFPPRTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGVRPGL", - "protein_translation_length": 296, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948431" - ], - [ - "gene_synonym", - "EcoGene:EG10511" - ], - [ - "gene_synonym", - "JW3914" - ], - [ - "gene_synonym", - "b3942" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P13029" - ], - [ - "gene_synonym", - "ASAP:ABE-0012901" - ], - [ - "gene_synonym", - "NP_418377.1" - ], - [ - "gene_synonym", - "GI:16131780" - ], - [ - "gene_synonym", - "ECK3934" - ], - [ - "gene_synonym", - "katG" - ] - ], - "dna_sequence": "ATGAGCACGTCAGACGATATCCATAACACCACAGCCACTGGCAAATGCCCGTTCCATCAGGGCGGTCACGACCAGAGTGCGGGGGCGGGCACAACCACTCGCGACTGGTGGCCAAATCAACTTCGTGTTGACCTGTTAAACCAACATTCTAATCGTTCTAACCCACTGGGTGAGGACTTTGACTACCGCAAAGAATTCAGCAAATTAGATTACTACGGCCTGAAAAAAGATCTGAAAGCCCTGTTGACAGAATCTCAACCGTGGTGGCCAGCCGACTGGGGCAGTTACGCCGGTCTGTTTATTCGTATGGCCTGGCACGGCGCGGGGACTTACCGTTCAATCGATGGACGCGGTGGCGCGGGTCGTGGTCAGCAACGTTTTGCACCGCTGAACTCCTGGCCGGATAACGTAAGCCTCGATAAAGCGCGTCGCCTGTTGTGGCCAATCAAACAGAAATATGGTCAGAAAATCTCCTGGGCCGACCTGTTTATCCTCGCGGGTAACGTGGCGCTAGAAAACTCCGGCTTCCGTACCTTCGGTTTTGGTGCCGGTCGTGAAGACGTCTGGGAACCGGATCTGGATGTTAACTGGGGTGATGAAAAAGCCTGGCTGACTCACCGTCATCCGGAAGCGCTGGCGAAAGCACCGCTGGGTGCAACCGAGATGGGTCTGATTTACGTTAACCCGGAAGGCCCGGATCACAGCGGCGAACCGCTTTCTGCGGCAGCAGCTATCCGCGCGACCTTCGGCAACATGGGCATGAACGACGAAGAAACCGTGGCGCTGATTGCGGGTGGTCATACGCTGGGTAAAACCCACGGTGCCGGTCCGACATCAAATGTAGGTCCTGATCCAGAAGCTGCACCGATTGAAGAACAAGGTTTAGGTTGGGCGAGCACTTACGGCAGCGGCGTTGGCGCAGATGCCATTACCTCTGGTCTGGAAGTAGTCTGGACCCAGACGCCGACCCAGTGGAGCAACTATTTCTTCGAGAACCTGTTCAAGTATGAGTGGGTACAGACCCGCAGCCCGGCTGGCGCAATCCAGTTCGAAGCGGTAGACGCACCGGAAATTATCCCGGATCCGTTTGATCCGTCGAAGAAACGTAAACCGACAATGCTGGTGACCGACCTGACGCTGCGTTTTGATCCTGAGTTCGAGAAGATCTCTCGTCGTTTCCTCAACGATCCGCAGGCGTTCAACGAAGCCTTTGCCCGTGCCTGGTTCAAACTGACGCACAGGGATATGGGGCCGAAATCTCGCTACATCGGGCCGGAAGTGCCGAAAGAAGATCTGATCTGGCAAGATCCGCTGCCGCAGCCGATCTACAACCCGACCGAGCAGGACATTATCGATCTGAAATTCGCGATTGCGGATTCTGGTCTGTCTGTTAGTGAGCTGGTATCGGTGGCCTGGGCATCTGCTTCTACCTTCCGTGGTGGCGACAAACGCGGTGGTGCCAACGGTGCGCGTCTGGCATTAATGCCGCAGCGCGACTGGGATGTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAGTGCTGGCTGGTGTGGTTGGTGTTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAA", - "dna_sequence_length": 2181, - "functions": [ - "catalase-peroxidase HPI, heme b-containing" - ], - "id": "CDS_3870", - "location": [ - [ - "NC_000913", - 4133835, - "+", - 2181 - ] - ], - "md5": "c121a03892a997bbdae55173d9adcf00", - "parent_gene": "", - "protein_md5": "ebd5357d3ce128574f709ea93cbd420c", - "protein_translation": "MSTSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVDLLNQHSNRSNPLGEDFDYRKEFSKLDYYGLKKDLKALLTESQPWWPADWGSYAGLFIRMAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLGATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAGPTSNVGPDPEAAPIEEQGLGWASTYGSGVGADAITSGLEVVWTQTPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAFNEAFARAWFKLTHRDMGPKSRYIGPEVPKEDLIWQDPLPQPIYNPTEQDIIDLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLALMPQRDWDVNAAAVRALPVLEKIQKESGKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDIEMFELLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFDGSKNGVFTDRVGVLSNDFFVNLLDMRYEWKATDESKELFEGRDRETGEVKFTASRADLVFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNLDRFDLL", - "protein_translation_length": 726, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABT8" - ], - [ - "gene_synonym", - "GeneID:948445" - ], - [ - "gene_synonym", - "b3943" - ], - [ - "gene_synonym", - "yijE" - ], - [ - "gene_synonym", - "ASAP:ABE-0012906" - ], - [ - "gene_synonym", - "JW5557" - ], - [ - "gene_synonym", - "GI:90111667" - ], - [ - "gene_synonym", - "EcoGene:EG11902" - ], - [ - "gene_synonym", - "NP_418378.4" - ], - [ - "gene_synonym", - "ECK3935" - ] - ], - "dna_sequence": "ATGTCTGCCGCAGGAAAGAGCAACCCACTGGCAATCAGTGGCCTGGTTGTGCTCACACTTATCTGGAGTTATAGCTGGATTTTCATGAAGCAAGTCACCAGTTACATCGGTGCCTTCGACTTTACCGCCTTACGCTGCATTTTCGGCGCTCTCGTTTTATTCATCGTCCTTTTATTACGTGGTCGCGGAATGCGCCCGACACCGTTTAAATACACCTTAGCCATTGCCCTGTTACAAACCTGCGGGATGGTTGGTCTGGCGCAGTGGGCGTTGGTCAGCGGAGGTGCGGGGAAGGTGGCGATCCTGAGCTATACCATGCCGTTCTGGGTGGTGATTTTCGCCGCGTTGTTTCTCGGTGAACGCCTGCGACGTGGGCAATATTTCGCGATTCTGATTGCCGCTTTCGGCTTATTTTTGGTGTTGCAGCCGTGGCAACTCGATTTCTCTTCGATGAAAAGTGCCATGCTGGCAATCCTCTCCGGCGTCAGTTGGGGGGCGAGCGCGATTGTTGCTAAACGTCTGTATGCCCGTCATCCGCGCGTGGATTTATTGTCGTTAACATCCTGGCAGATGCTGTATGCGGCGCTGGTGATGAGTGTGGTCGCTTTACTGGTGCCGCAACGTGAAATTGACTGGCAGCCCACCGTGTTCTGGGCGCTGGCCTACAGTGCGATTCTGGCGACGGCACTGGCGTGGAGCTTATGGTTGTTTGTATTGAAAAACTTGCCTGCCAGTATTGCCAGCTTAAGCACACTGGCCGTTCCCGTTTGCGGCGTACTCTTTTCCTGGTGGCTGCTCGGCGAGAATCCGGGGGCCGTTGAAGGTAGCGGTATTGTGCTGATTGTGCTGGCACTGGCGCTGGTGAGCCGTAAGAAAAAAGAAGCCGTCAGTGTAAAAAGGATCTGA", - "dna_sequence_length": 906, - "functions": [ - "EamA-like transporter family protein" - ], - "id": "CDS_3871", - "location": [ - [ - "NC_000913", - 4136108, - "+", - 906 - ] - ], - "md5": "fa40e60c97dcc23abda3b3429eb0c05a", - "parent_gene": "", - "protein_md5": "ee33b1f96fbb9fc32c120416e947a427", - "protein_translation": "MSAAGKSNPLAISGLVVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRGMRPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVSRKKKEAVSVKRI", - "protein_translation_length": 301, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0012908" - ], - [ - "gene_synonym", - "b3944" - ], - [ - "gene_synonym", - "yijF" - ], - [ - "gene_synonym", - "JW3916" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32668" - ], - [ - "gene_synonym", - "GeneID:948441" - ], - [ - "gene_synonym", - "EcoGene:EG11903" - ], - [ - "gene_synonym", - "GI:16131782" - ], - [ - "gene_synonym", - "NP_418379.1" - ], - [ - "gene_synonym", - "ECK3936" - ] - ], - "dna_sequence": "ATGAAAGCTTCACTGGCGCTGCTCAGCCTGCTAACGGCATTTACCAGCCACTCCTTAAAATCTCCCGCCGTTCCACCAACCGTGGTACAAATCCAGGCCAATACCAACCTTGCCATCGCAGACGGTGCCAGACAGCAAATTGGCAGCACGCTATTTTACGATCCGGCGTATGTGCAGCTTACTTATCCTGGCGGTGATGTTCCGCAAGAACGCGGTGTATGTTCCGATGTGGTGATCCGCGCATTGCGCAGCCAGAAGGTCGATTTGCAGAAACTGGTTCACGAAGATATGGCGAAGAATTTTGCTGAGTACCCGCAAAAATGGAAGTTAAAGCGCCCGGACAGCAACATCGATCACCGTCGGGTGCCTAATCTGGAAACCTGGTTTAGCCGCCATGATAAAACACGCCCCACCAGCAAGAACCCCAGTGACTATCAAGCGGGCGATATTGTCTCCTGGCGACTGGATAACGGGCTGGCACATATTGGGGTGGTTTCAGATGGCTTCGCCCGCGACGGTACGCCGCTGGTGATACATAACATTGGCGCAGGCGCGCAGGAAGAAGATGTGCTGTTTAACTGGCGGATGGTGGGGCATTATCGTTATTTTGTTAAATAA", - "dna_sequence_length": 618, - "functions": [ - "DUF1287 family protein" - ], - "id": "CDS_3872", - "location": [ - [ - "NC_000913", - 4137657, - "-", - 618 - ] - ], - "md5": "e8c90d973ddc3ec03e828ada3e51ff5c", - "parent_gene": "", - "protein_md5": "6f01c581f6ee902a2694e4d2a8c90988", - "protein_translation": "MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYFVK", - "protein_translation_length": 205, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3945" - ], - [ - "gene_synonym", - "GI:90111668" - ], - [ - "gene_synonym", - "GeneID:948440" - ], - [ - "gene_synonym", - "EcoGene:EG11904" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9S5" - ], - [ - "gene_synonym", - "gldA" - ], - [ - "gene_synonym", - "JW5556" - ], - [ - "gene_synonym", - "ASAP:ABE-0012912" - ], - [ - "gene_synonym", - "NP_418380.4" - ], - [ - "gene_synonym", - "ECK3937" - ] - ], - "dna_sequence": "ATGGACCGCATTATTCAATCACCGGGTAAATACATCCAGGGCGCTGATGTGATTAATCGTCTGGGCGAATACCTGAAGCCGCTGGCAGAACGCTGGTTAGTGGTGGGTGACAAATTTGTTTTAGGTTTTGCTCAATCCACTGTCGAGAAAAGCTTTAAAGATGCTGGACTGGTAGTAGAAATTGCGCCGTTTGGCGGTGAATGTTCGCAAAATGAGATCGACCGTCTGCGTGGCATCGCGGAGACTGCGCAGTGTGGCGCAATTCTCGGTATCGGTGGCGGAAAAACCCTCGATACTGCCAAAGCACTGGCACATTTCATGGGTGTTCCGGTAGCGATCGCACCGACTATCGCCTCTACCGATGCACCGTGCAGCGCATTGTCTGTTATCTACACCGATGAGGGTGAGTTTGACCGCTATCTGCTGTTGCCAAATAACCCGAATATGGTCATTGTCGACACCAAAATCGTCGCTGGCGCACCTGCACGTCTGTTAGCGGCGGGTATCGGCGATGCGCTGGCAACCTGGTTTGAAGCGCGTGCCTGCTCTCGTAGCGGCGCGACCACCATGGCGGGCGGCAAGTGCACCCAGGCTGCGCTGGCACTGGCTGAACTGTGCTACAACACCCTGCTGGAAGAAGGCGAAAAAGCGATGCTTGCTGCCGAACAGCATGTAGTGACTCCGGCGCTGGAGCGCGTGATTGAAGCGAACACCTATTTGAGCGGTGTTGGTTTTGAAAGTGGTGGTCTGGCTGCGGCGCACGCAGTGCATAACGGCCTGACCGCTATCCCGGACGCGCATCACTATTATCACGGTGAAAAAGTGGCATTCGGTACGCTGACGCAGCTGGTTCTGGAAAATGCGCCGGTGGAGGAAATCGAAACCGTAGCTGCCCTTAGCCATGCGGTAGGTTTGCCAATAACTCTCGCTCAACTGGATATTAAAGAAGATGTCCCGGCGAAAATGCGAATTGTGGCAGAAGCGGCATGTGCAGAAGGTGAAACCATTCACAACATGCCTGGCGGCGCGACGCCAGATCAGGTTTACGCCGCTCTGCTGGTAGCCGACCAGTACGGTCAGCGTTTCCTGCAAGAGTGGGAATAA", - "dna_sequence_length": 1104, - "functions": [ - "glycerol dehydrogenase, NAD+ dependent", - "1,2-propanediol:NAD+ oxidoreductase" - ], - "id": "CDS_3873", - "location": [ - [ - "NC_000913", - 4139035, - "-", - 1104 - ] - ], - "md5": "d808ce58b58269e944b113c121453d3b", - "parent_gene": "", - "protein_md5": "41885b05530325e8f45cb8ae67bb2a19", - "protein_translation": "MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFAQSTVEKSFKDAGLVVEIAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKALAHFMGVPVAIAPTIASTDAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGAPARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAMLAAEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVAFGTLTQLVLENAPVEEIETVAALSHAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGETIHNMPGGATPDQVYAALLVADQYGQRFLQEWE", - "protein_translation_length": 367, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "fsaB" - ], - [ - "gene_synonym", - "b3946" - ], - [ - "gene_synonym", - "NP_418381.1" - ], - [ - "gene_synonym", - "yijG" - ], - [ - "gene_synonym", - "JW3918" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32669" - ], - [ - "gene_synonym", - "ECK3938" - ], - [ - "gene_synonym", - "ASAP:ABE-0012915" - ], - [ - "gene_synonym", - "talC" - ], - [ - "gene_synonym", - "EcoGene:EG11905" - ], - [ - "gene_synonym", - "GeneID:948439" - ], - [ - "gene_synonym", - "GI:16131784" - ] - ], - "dna_sequence": "ATGGAACTGTATCTGGACACCGCTAACGTCGCAGAAGTCGAACGTCTGGCACGCATATTCCCCATTGCCGGGGTGACAACTAACCCGAGCATTATCGCTGCCAGCAAGGAGTCCATATGGGAAGTGCTGCCGCGTCTGCAAAAAGCGATTGGTGATGAGGGCATTCTGTTTGCTCAGACCATGAGCCGCGACGCGCAGGGGATGGTGGAAGAAGCGAAGCGCCTGCGCGACGCTATTCCGGGTATTGTGGTGAAAATCCCGGTGACTTCCGAAGGTCTGGCAGCAATTAAAATACTGAAAAAAGAGGGTATTACTACACTTGGCACTGCTGTATATAGCGCCGCACAAGGGTTATTAGCCGCACTGGCAGGGGCAAAATACGTTGCTCCGTATGTTAACCGCGTAGATGCCCAGGGCGGAGACGGCATTCGTACGGTTCAGGAGCTGCAAACGCTGTTAGAAATGCACGCGCCAGAAAGCATGGTGCTGGCAGCCAGCTTTAAAACGCCGCGTCAGGCGCTGGACTGTTTACTGGCAGGATGTGAATCCATCACCCTGCCCTTAGATGTAGCGCAACAAATGCTCAACACCCCTGCGGTAGAGTCAGCTATAGAGAAGTTCGAACACGACTGGAATGCCGCATTTGGCACTACTCATCTCTAA", - "dna_sequence_length": 663, - "functions": [ - "fructose-6-phosphate aldolase 2" - ], - "id": "CDS_3874", - "location": [ - [ - "NC_000913", - 4139708, - "-", - 663 - ] - ], - "md5": "e37b82ccad182f45326d422587a51f6e", - "parent_gene": "", - "protein_md5": "bfabdd738cc4915d44ddb8814cf74056", - "protein_translation": "MELYLDTANVAEVERLARIFPIAGVTTNPSIIAASKESIWEVLPRLQKAIGDEGILFAQTMSRDAQGMVEEAKRLRDAIPGIVVKIPVTSEGLAAIKILKKEGITTLGTAVYSAAQGLLAALAGAKYVAPYVNRVDAQGGDGIRTVQELQTLLEMHAPESMVLAASFKTPRQALDCLLAGCESITLPLDVAQQMLNTPAVESAIEKFEHDWNAAFGTTHL", - "protein_translation_length": 220, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "frwA" - ], - [ - "gene_synonym", - "b3947" - ], - [ - "gene_synonym", - "GeneID:948437" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32670" - ], - [ - "gene_synonym", - "yijH" - ], - [ - "gene_synonym", - "JW5555" - ], - [ - "gene_synonym", - "ECK3939" - ], - [ - "gene_synonym", - "ASAP:ABE-0012920" - ], - [ - "gene_synonym", - "EcoGene:EG11906" - ], - [ - "gene_synonym", - "YP_026278.1" - ], - [ - "gene_synonym", - "ptsA" - ], - [ - "gene_synonym", - "GI:49176446" - ] - ], - "dna_sequence": "ATGGCCCTGATTGTGGAATTTATTTGTGAGCTACCTAACGGCGTACATGCGCGTCCGGCAAGCCACGTTGAAACGCTGTGTAATACTTTTTCATCACAAATTGAGTGGCATAACCTGCGCACTGACCGCAAGGGCAACGCCAAAAGCGCCCTTGCGCTGATTGGCACCGATACGCTGGCGGGCGATAACTGCCAGTTACTGATTTCCGGGGCCGACGAACAGGAAGCGCACCAGCGTTTAAGCCAATGGCTGCGCGATGAATTCCCCCACTGCGATGCGCCGCTGGCGGAAGTTAAATCTGACGAACTGGAACCACTGCCGGTTTCACTGACCAATCTGAATCCGCAAATTATCCGCGCCCGCACCGTGTGCAGCGGTAGTGCAGGCGGCATTCTGACGCCGATCTCTTCTTTAGATCTCAATGCGCTGGGTAATCTTCCCGCAGCCAAAGGCGTTGACGCCGAGCAATCCGCACTGGAAAACGGCCTGACGCTGGTACTGAAAAACATTGAGTTTCGTCTGCTGGATAGCGACGGTGCTACCAGCGCGATTCTGGAAGCTCACCGATCCCTGGCTGGCGATACTTCCCTGCGCGAACATTTACTGGCAGGCGTCAGCGCCGGATTAAGCTGCGCCGAAGCAATTGTTGCCAGCGCGAATCACTTTTGCGAAGAGTTTTCCCGTTCCAGCAGCAGCTACCTGCAAGAACGTGCCCTGGACGTACGCGACGTCTGCTTCCAGTTACTCCAGCAAATCTACGGTGAGCAACGCTTCCCGGCACCGGGCAAACTGACGCAGCCCGCCATTTGTATGGCTGATGAACTGACCCCCAGCCAGTTCCTCGAACTGGATAAAAATCACCTCAAAGGATTGTTGCTCAAAAGCGGCGGCACCACCTCACATACGGTGATCCTTGCCCGTTCGTTCAACATTCCAACGCTGGTTGGTGTGGATATTGATGCCCTTACTCCGTGGCAGCAACAAACGATTTATATCGACGGCAACGCCGGGGCGATTGTGGTTGAGCCAGGGGAAGCCGTAGCTCGTTATTATCAGCAAGAAGCCCGCGTACAGGACGCCCTGCGTGAGCAACAGCGTGTCTGGCTGACCCAACAAGCCCGTACCGCTGACGGTATCCGCATTGAAATTGCCGCTAACATCGCTCACTCCGTGGAAGCGCAGGCCGCATTCGGCAATGGTGCGGAAGGCGTTGGTTTGTTCCGCACTGAAATGCTCTATATGGATCGCACCAGCGCACCGGGCGAAAGCGAGTTGTACAACATTTTTTGTCAGGCGCTGGAATCCGCCAACGGACGCAGCATTATTGTGCGCACTATGGACATTGGCGGCGACAAACCCGTTGATTATCTGAACATTCCCGCAGAGGCAAACCCGTTCCTCGGTTATCGCGCCGTGCGTATTTATGAAGAGTACGCGTCGTTGTTTACCACGCAGCTACGGTCGATCCTCCGCGCCTCCGCTCACGGCAGCCTGAAAATCATGATCCCGATGATCTCCTCAATGGAAGAGATCTTATGGGTGAAAGAAAAACTGGCGGAAGCCAAACAGCAACTACGTAACGAACACATTCCGTTTGATGAGAAAATCCAGCTCGGCATCATGCTGGAAGTGCCGTCGGTGATGTTCATCATCGATCAATGCTGCGAAGAGATTGATTTCTTTAGTATTGGTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATCGCGATAACGCTAAGGTTACTCGTCACTACAACAGCCTGAATCCGGCATTCTTGCGGGCGCTCGATTACGCCGTGCAAGCGGTGCATCGCCAGGGCAAATGGATTGGTCTGTGCGGTGAGCTGGGAGCGAAAGGTTCCGTGCTGCCGTTGCTGGTCGGCTTAGGGCTGGATGAACTCAGCATGAGCGCACCATCAATTCCGGCGGCGAAAGCTCGGATGGCGCAACTTGATAGCCGTGAGTGCCGCAAGTTGCTCAACCAGGCAATGGCCTGCCGTACTTCGCTGGAAGTAGAACACCTGCTGGCGCAATTCCGCATGACCCAACAAGACGCACCGCTGGTCACCGCCGAGTGCATCACACTGGAAAGCGACTGGCGCAGCAAAGAAGAAGTGCTCAAAGGCATGACCGATAACCTGCTGCTGGCGGGCCGCTGCCGCTATCCGCGTAAACTGGAAGCCGACTTGTGGGCGCGCGAGGCCGTTTTCTCTACCGGTCTGGGCTTTAGTTTTGCCATTCCACACAGCAAATCAGAACACATTGAGCAATCCACCATCAGCGTGGCGCGTCTGCAAGCGCCGGTGCGCTGGGGCGATGATGAAGCGCAATTCATCATTATGTTAACCCTGAACAAACACGCTGCGGGCGATCAGCATATGCGCATTTTCTCGCGCCTCGCTCGCCGCATCATGCACGAAGAATTCCGTAACGCGCTGGTTAACGCCGCCTCTGCCGACGCTATCGCCAGCCTGCTGCAACATGAACTGGAACTGTAA", - "dna_sequence_length": 2502, - "functions": [ - "putative PTS enzyme: Hpr, enzyme I and II components" - ], - "id": "CDS_3875", - "location": [ - [ - "NC_000913", - 4142221, - "-", - 2502 - ] - ], - "md5": "ec8e4d0fcd7bfc110313e2facc3a13b4", - "parent_gene": "", - "protein_md5": "730816019363625b8f519d0774d7f3e3", - "protein_translation": "MALIVEFICELPNGVHARPASHVETLCNTFSSQIEWHNLRTDRKGNAKSALALIGTDTLAGDNCQLLISGADEQEAHQRLSQWLRDEFPHCDAPLAEVKSDELEPLPVSLTNLNPQIIRARTVCSGSAGGILTPISSLDLNALGNLPAAKGVDAEQSALENGLTLVLKNIEFRLLDSDGATSAILEAHRSLAGDTSLREHLLAGVSAGLSCAEAIVASANHFCEEFSRSSSSYLQERALDVRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELTPSQFLELDKNHLKGLLLKSGGTTSHTVILARSFNIPTLVGVDIDALTPWQQQTIYIDGNAGAIVVEPGEAVARYYQQEARVQDALREQQRVWLTQQARTADGIRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEMLYMDRTSAPGESELYNIFCQALESANGRSIIVRTMDIGGDKPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQLRSILRASAHGSLKIMIPMISSMEEILWVKEKLAEAKQQLRNEHIPFDEKIQLGIMLEVPSVMFIIDQCCEEIDFFSIGSNDLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQAVHRQGKWIGLCGELGAKGSVLPLLVGLGLDELSMSAPSIPAAKARMAQLDSRECRKLLNQAMACRTSLEVEHLLAQFRMTQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCRYPRKLEADLWAREAVFSTGLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFIIMLTLNKHAAGDQHMRIFSRLARRIMHEEFRNALVNAASADAIASLLQHELEL", - "protein_translation_length": 833, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3940" - ], - [ - "gene_synonym", - "ASAP:ABE-0012928" - ], - [ - "gene_synonym", - "frwC" - ], - [ - "gene_synonym", - "JW3921" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32672" - ], - [ - "gene_synonym", - "yijJ" - ], - [ - "gene_synonym", - "GeneID:948448" - ], - [ - "gene_synonym", - "b3949" - ], - [ - "gene_synonym", - "NP_418384.1" - ], - [ - "gene_synonym", - "EcoGene:EG11908" - ], - [ - "gene_synonym", - "GI:16131787" - ] - ], - "dna_sequence": "ATGAATGAGTTGGTGCAGATCCTGAAAAATACCCGTCAGCATTTAATGACGGGCGTTTCACACATGATTCCCTTCGTGGTATCGGGCGGTATTTTGCTGGCGGTTTCCGTCATGTTGTATGGCAAAGGCGCAGTGCCGGATGCCGTAGCCGATCCAAATCTGAAAAAACTGTTTGATATCGGCGTTGCGGGCTTGACGCTGATGGTGCCTTTCCTCGCAGCGTACATCGGTTATTCCATTGCAGAGCGTTCTGCGCTGGCTCCGTGCGCTATCGGTGCCTGGGTTGGTAACAGCTTTGGTGCGGGCTTCTTTGGTGCACTGATCGCCGGGATTATCGGCGGCATCGTGGTGCATTACCTGAAGAAAATTCCGGTGCATAAAGTTCTGCGCTCGGTGATGCCTATCTTCATTATTCCTATCGTCGGCACACTGATTACCGCAGGCATCATGATGTGGGGCTTGGGCGAGCCTGTAGGGGCGTTGACCAACAGCCTGACTCAGTGGCTTCAGGGGATGCAGCAGGGCAGCATTGTTATGCTGGCGGTGATCATGGGTCTGATGCTGGCGTTCGATATGGGCGGTCCGGTTAACAAAGTGGCCTATGCCTTCATGCTGATTTGCGTTGCTCAGGGTGTTTATACCGTGGTGGCCATCGCTGCCGTGGGTATTTGTATCCCGCCGCTGGGGATGGGGCTGGCGACGCTGATTGGTCGTAAAAATTTCTCCGCAGAAGAGCGCGAAACCGGCAAAGCGGCACTGGTGATGGGCTGTGTTGGCGTTACTGAAGGGGCGATTCCTTTCGCCGCTGCCGATCCGCTGCGTGTCATTCCTTCCATCATGGTCGGTTCAGTTTGTGGTGCAGTAACTGCGGCGCTGGTCGGTGCGCAGTGCTATGCAGGCTGGGGTGGTCTGATTGTGCTGCCGGTGGTTGAAGGCAAGCTGGGTTATATCGCAGCAGTGGCTGTCGGAGCAGTGGTGACGGCTGTTTGTGTGAACGTGCTGAAAAGTCTGGCGCGTAAAAATGGGTCTTCGACTGATGAAAAAGAAGACGACCTGGATTTGGATTTTGAAATTAATTAA", - "dna_sequence_length": 1080, - "functions": [ - "putative enzyme IIC component of PTS" - ], - "id": "CDS_3876", - "location": [ - [ - "NC_000913", - 4142530, - "+", - 1080 - ] - ], - "md5": "17c7a685c1ddc195bc2f32deac037984", - "parent_gene": "", - "protein_md5": "f86a7e80cdbf5542a6dee4efc45dc61d", - "protein_translation": "MNELVQILKNTRQHLMTGVSHMIPFVVSGGILLAVSVMLYGKGAVPDAVADPNLKKLFDIGVAGLTLMVPFLAAYIGYSIAERSALAPCAIGAWVGNSFGAGFFGALIAGIIGGIVVHYLKKIPVHKVLRSVMPIFIIPIVGTLITAGIMMWGLGEPVGALTNSLTQWLQGMQQGSIVMLAVIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTVVAIAAVGICIPPLGMGLATLIGRKNFSAEERETGKAALVMGCVGVTEGAIPFAAADPLRVIPSIMVGSVCGAVTAALVGAQCYAGWGGLIVLPVVEGKLGYIAAVAVGAVVTAVCVNVLKSLARKNGSSTDEKEDDLDLDFEIN", - "protein_translation_length": 359, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3950" - ], - [ - "gene_synonym", - "ECK3941" - ], - [ - "gene_synonym", - "frwB" - ], - [ - "gene_synonym", - "ASAP:ABE-0012930" - ], - [ - "gene_synonym", - "JW3922" - ], - [ - "gene_synonym", - "NP_418385.1" - ], - [ - "gene_synonym", - "yijK" - ], - [ - "gene_synonym", - "GI:16131788" - ], - [ - "gene_synonym", - "GeneID:948447" - ], - [ - "gene_synonym", - "EcoGene:EG11909" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69816" - ] - ], - "dna_sequence": "ATGACGAAAATTATTGCAGTAACCGCATGTCCTTCAGGTGTTGCCCATACCTATATGGCAGCAGAGGCGCTGGAAAGTGCCGCGAAAGCGAAAGGCTGGGAAGTGAAAGTAGAAACCCAGGGGTCAATTGGTCTGGAAAATGAACTGACTGCGGAAGATGTGGCGAGCGCTGATATGGTGATTCTGACCAAAGATATCGGCATCAAGTTTGAAGAGCGTTTTGCTGGCAAGACCATCGTGCGCGTCAACATCAGCGATGCAGTAAAACGTGCTGACGCCATTATGAGCAAAATTGAAGCTCACCTGGCGCAAACCGCTTAA", - "dna_sequence_length": 321, - "functions": [ - "putative enzyme IIB component of PTS" - ], - "id": "CDS_3877", - "location": [ - [ - "NC_000913", - 4143624, - "+", - 321 - ] - ], - "md5": "e135f90076320ca49cdf10723d6da074", - "parent_gene": "", - "protein_md5": "41c745e1144737d3a54930399d749fd8", - "protein_translation": "MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHLAQTA", - "protein_translation_length": 106, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3951" - ], - [ - "gene_synonym", - "ECK3942" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32674" - ], - [ - "gene_synonym", - "NP_418386.1" - ], - [ - "gene_synonym", - "JW3923" - ], - [ - "gene_synonym", - "pflD" - ], - [ - "gene_synonym", - "yijL" - ], - [ - "gene_synonym", - "ASAP:ABE-0012934" - ], - [ - "gene_synonym", - "GI:16131789" - ], - [ - "gene_synonym", - "EcoGene:EG11910" - ], - [ - "gene_synonym", - "GeneID:948454" - ] - ], - "dna_sequence": "ATGACGAATCGTATCTCTCGCCTCAAAACTGCACTGTTTGCCAATACCCGTGAAATCTCGCTGGAGCGGGCGCTGCTTTATACCGCCAGCCATCGGCAAACCGAAGGCGAACCGGTGATATTGCGCCGGGCGAAAGCAACAGCGTATATCCTTGAACATGTTGAAATTTCGATTCGTGATGAAGAACTGATTGCCGGTAACCGCACCGTAAAACCGCGCGCCGGGATTATGTCGCCGGAAATGGACCCTTACTGGCTGCTGAAAGAGCTGGATCAATTCCCGACGCGTCCGCAGGACCGCTTTGCTATCAGCGAAGAAGATAAACGTATCTACCGTGAAGAGTTGTTCCCGTACTGGGAAAAACGTTCGATGAAAGATTTCATCAACGGGCAGATGACAGATGAAGTAAAAGCCGCGACCAACACGCAGATTTTCAGCATCAACCAGACGGATAAAGGCCAGGGGCACATTATTATTGATTACCCACGCCTGTTGAATCACGGGCTGGGTGAGCTGGTGGCACAGATGCAGCAACATTGTCAGCAACAGCCGGAGAATCACTTTTATCAGGCCGCGTTGTTACTGCTGGAAGCCTCGCAGAAACACATTTTGCGTTACGCCGAACTGGCGGAAACGATGGCGGCAAACTGCACAGATGCCCAGCGTCGCGAAGAGCTGCTGACTATTGCAGAGATCTCCCGCCATAACGCGCAACATAAGCCGCAGACGTTCTGGCAGGCGTGCCAGTTATTCTGGTACATGAACATCATTCTGCAATACGAATCCAACGCCAGTTCGCTATCGTTGGGGCGCTTCGACCAGTATATGTTGCCGTTCTATCAGACATCATTAACCCAGGGCGAAGATGCGGCGTTCCTGAAAGAACTGCTCGAATCTTTATGGGTGAAATGCAACGACATCGTGCTGTTGCGCTCCACCAGTAGCGCGCGTTATTTCGCCGGTTTCCCGACCGGCTATACCGCACTGCTCGGCGGGTTAACCGAGAACGGACGTAGCGCGGTGAACGTGCTTTCGTTCCTTTGCCTTGACGCCTATCAAAGCGTGCAATTACCGCAACCGAACCTCGGCGTGCGCACTAACGCCTTGATCGACACGCCGTTCCTGATGAAAACCGCCGAAACCATTCGCTTCGGTACCGGTATTCCGCAAATCTTTAACGATGAAGTGGTGGTGCCAGCGTTCCTCAACCGTGGCGTTTCGCTGGAAGATGCGCGCGACTATTCCGTAGTGGGCTGTGTGGAATTATCTATTCCCGGCAGAACCTACGGCTTGCATGACATCGCGATGTTTAATCTGCTGAAAGTGATGGAAATCTGCCTGCATGAAAATGAAGGCAATGCTGCGCTGACTTATGAAGGTTTACTGGAGCAGATCCGCGCCAAGATCAGCCACTACATCACCCTGATGGTTGAGGGCAGCAATATTTGTGATATCGGCCATCGCGACTGGGCACCTGTACCGCTGCTCTCATCGTTTATCAGCGATTGTCTGGAAAAAGGCCGCGATATTACCGATGGCGGCGCGCGTTATAACTTCTCCGGCGTACAGGGGATCGGTATCGCCAACCTGAGCGATTCTCTCCATGCGTTGAAAGGGATGGTTTTTGAGCAACAGCGTTTAAGTTTTGACGAATTGCTGTCGGTATTAAAAGCCAACTTCGCAACGCCAGAAGGCGAAAAAGTCCGCGCTCGCTTAATTAACCGCTTCGAGAAATACGGTAACGATATCGACGAGGTGGATAACATCAGCGCCGAACTGTTGCGCCACTACTGCAAAGAAGTGGAAAAATACCAGAACCCGCGCGGCGGCTACTTCACGCCGGGATCGTATACCGTTTCTGCTCACGTCCCGTTGGGATCGGTGGTTGGCGCGACGCCAGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTACGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTGAACGCCGACACGTTGCGGGAAGCGCAACAGCGCCCACAAGATTATGCCGGGCTGGTGGTGCGCGTTGCCGGATACAGCGCCTTCTTTGTCGAACTGTCGAAGGAGATCCAGGATGACATCATCCGCCGGACAGCGCATCAGCTGTAA", 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"MTNRISRLKTALFANTREISLERALLYTASHRQTEGEPVILRRAKATAYILEHVEISIRDEELIAGNRTVKPRAGIMSPEMDPYWLLKELDQFPTRPQDRFAISEEDKRIYREELFPYWEKRSMKDFINGQMTDEVKAATNTQIFSINQTDKGQGHIIIDYPRLLNHGLGELVAQMQQHCQQQPENHFYQAALLLLEASQKHILRYAELAETMAANCTDAQRREELLTIAEISRHNAQHKPQTFWQACQLFWYMNIILQYESNASSLSLGRFDQYMLPFYQTSLTQGEDAAFLKELLESLWVKCNDIVLLRSTSSARYFAGFPTGYTALLGGLTENGRSAVNVLSFLCLDAYQSVQLPQPNLGVRTNALIDTPFLMKTAETIRFGTGIPQIFNDEVVVPAFLNRGVSLEDARDYSVVGCVELSIPGRTYGLHDIAMFNLLKVMEICLHENEGNAALTYEGLLEQIRAKISHYITLMVEGSNICDIGHRDWAPVPLLSSFISDCLEKGRDITDGGARYNFSGVQGIGIANLSDSLHALKGMVFEQQRLSFDELLSVLKANFATPEGEKVRARLINRFEKYGNDIDEVDNISAELLRHYCKEVEKYQNPRGGYFTPGSYTVSAHVPLGSVVGATPDGRFAGEQLADGGLSPMLGQDAQGPTAVLKSVSKLDNTLLSNGTLLNVKFTPATLEGEAGLRKLADFLRAFTQLKLQHIQFNVVNADTLREAQQRPQDYAGLVVRVAGYSAFFVELSKEIQDDIIRRTAHQL", - "protein_translation_length": 765, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3924" - ], - [ - "gene_synonym", - "b3952" - ], - [ - "gene_synonym", - "ECK3943" - ], - [ - "gene_synonym", - "GeneID:948453" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32675" - ], - [ - "gene_synonym", - "ASAP:ABE-0012937" - ], - [ - "gene_synonym", - "pflC" - ], - [ - "gene_synonym", - "yijM" - ], - [ - "gene_synonym", - "EcoGene:EG11911" - ], - [ - "gene_synonym", - "NP_418387.3" - ], - [ - "gene_synonym", - "GI:49176447" - ] - ], - "dna_sequence": "ATGACATCATCCGCCGGACAGCGCATCAGCTGTAACGTTGTGGAAACGCGCCGCGATGATGTGGCGCGCATTTTCAACATTCAGCGTTATTCACTGAATGACGGCGAGGGCATTCGTACGGTGGTCTTTTTTAAAGGCTGTCCGCATCTTTGCCCGTGGTGTGCTAATCCGGAGTCGATCTCCGGCAAAATCCAGACGGTACGCAGAGAGGCGAAATGTCTGCACTGTGCGAAATGTTTGCGTGATGCGGATGAATGCCCCTCCGGGGCGTTTGAACGGATTGGTCGCGATATCAGCCTTGACGCTCTGGAACGGGAAGTGATGAAAGATGACATTTTCTTTCGCACGTCCGGCGGCGGCGTCACGCTTTCTGGCGGCGAAGTGTTAATGCAGGCGGAGTTTGCTACCCGTTTTTTACAGCGACTGCGGCTGTGGGGTGTGTCATGCGCCATTGAAACTGCCGGAGACGCACCAGCCAGCAAGCTATTACCGCTGGCGAAATTGTGCGATGAAGTGTTGTTCGATTTAAAAATTATGGACGCGACTCAGGCGCGGGATGTGGTGAAGATGAACCTGCCACGCGTGCTGGAGAATCTGCGTTTGCTGGTGAGTGAGGGCGTCAACGTGATCCCGCGTTTACCGCTGATCCCTGGTTTCACGCTCAGCCGGGAGAATATGCAGCAGGCGCTGGATGTACTGATCCCGCTGAATATCAGGCAGATCCATCTGTTACCGTTTCATCAGTACGGCGAACCGAAATACCGCCTGCTGGGGAAAACATGGTCGATGAAAGAGGTGCCTGCGCCGTCGTCAGCTGATGTGGCAACGATGCGCGAAATGGCAGAACGGGCCGGACTTCAGGTTACCGTGGGAGGTTAA", - "dna_sequence_length": 879, - "functions": [ - "putative [formate-C-acetyltransferase 2]-activating enzyme", - "pyruvate formate-lyase 1-activating enzyme" - ], - "id": "CDS_3879", - "location": [ - [ - "NC_000913", - 4146258, - "+", - 879 - ] - ], - "md5": "212d4afa2ff74a422740c697917871d3", - "parent_gene": "", - "protein_md5": "0b40b05e678b3c68befc1c668fde691b", - "protein_translation": "MTSSAGQRISCNVVETRRDDVARIFNIQRYSLNDGEGIRTVVFFKGCPHLCPWCANPESISGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDALEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPGFTLSRENMQQALDVLIPLNIRQIHLLPFHQYGEPKYRLLGKTWSMKEVPAPSSADVATMREMAERAGLQVTVGG", - "protein_translation_length": 292, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3925" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32676" - ], - [ - "gene_synonym", - "b3953" - ], - [ - "gene_synonym", - "ECK3944" - ], - [ - "gene_synonym", - "frwD" - ], - [ - "gene_synonym", - "GeneID:948452" - ], - [ - "gene_synonym", - "NP_418388.1" - ], - [ - "gene_synonym", - "yijN" - ], - [ - "gene_synonym", - "EcoGene:EG11912" - ], - [ - "gene_synonym", - "GI:16131791" - ], - [ - "gene_synonym", - "ASAP:ABE-0012941" - ] - ], - "dna_sequence": "ATGGCATACCTGGTGGCAGTAACCGCCTGCGTAAGCGGCGTGGCGCATACTTATATGGCGGCGGAACGGCTGGAAAAGTTGTGCCTGTTAGAGAAGTGGGGAGTCAGCATTGAAACTCAGGGCGCGCTGGGAACGGAGAATCGTTTAGCGGATGAGGATATCCGCCGGGCGGATGTTGCTCTGTTGATTACGGATATCGAGCTTGCCGGTGCCGAGCGATTTGAACATTGCCGCTATGTGCAATGCAGCATCTACGCATTCCTGCGTGAGCCGCAGCGGGTAATGAGCGCGGTGCGCAAAGTGCTTTCTGCGCCGCAGCAAACCCATCTTATTCTGGAGTAG", - "dna_sequence_length": 342, - "functions": [ - "putative enzyme IIB component of PTS" - ], - "id": "CDS_3880", - "location": [ - [ - "NC_000913", - 4147138, - "+", - 342 - ] - ], - "md5": "bb45b84d8e4bfe08f2581bd507a9dcfa", - "parent_gene": "", - "protein_md5": "fe5507fb382a0fab75c7421b41d25e0e", - "protein_translation": "MAYLVAVTACVSGVAHTYMAAERLEKLCLLEKWGVSIETQGALGTENRLADEDIRRADVALLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVLSAPQQTHLILE", - "protein_translation_length": 113, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32677" - ], - [ - "gene_synonym", - "JW3926" - ], - [ - "gene_synonym", - "b3954" - ], - [ - "gene_synonym", - "ECK3945" - ], - [ - "gene_synonym", - "GeneID:948451" - ], - [ - "gene_synonym", - "NP_418389.1" - ], - [ - "gene_synonym", - "yijO" - ], - [ - "gene_synonym", - "EcoGene:EG11913" - ], - [ - "gene_synonym", - "ASAP:ABE-0012943" - ], - [ - "gene_synonym", - "GI:16131792" - ] - ], - "dna_sequence": "ATGTATCACGACGTCAGCTATCTGCTCTCCCGCCTGATCAACGGCCCGCTGTCCCTGCGCCAGATTTACTTTGCCAGCAGTAACGGCCCGGTGCCCGATCTTGCGTATCAGGTCGATTTTCCACGGCTGGAAATTGTGCTGGAAGGTGAGTTTGTTGATACCGGCGCTGGAGCAACGTTAGTTCCCGGCGATGTGCTGTACGTTCCTGCTGGTGGCTGGAATTTTCCACAATGGCAAGCCCCCGCTACTACCTTTAGCGTGCTGTTTGGCAAACAGCAACTCGGCTTCAGCGTCGTGCAATGGGATGGCAAACAATATCAAAATCTGGCGAAGCAACACGTCGCCCGACGCGGCCCACGCATAGGTTCTTTTCTGCTACAAACGCTCAATGAAATGCAAATGCAGCCGCAGGAGCAGCAAACGGCAAGGCTTATCGTCGCCAGCCTGCTTAGCCACTGCCGCGATTTGCTTGGCAGCCAAATCCAGACCGCCTCACGCAGCCAGGCACTATTTGAAGCTATTCGCGATTATATCGACGAACGCTATGCCTCCGCGCTTACCCGCGAATCTGTTGCACAGGCGTTTTATATTTCGCCAAATTACCTCTCGCACCTGTTTCAAAAAACGGGGGCCATTGGTTTTAACGAATACCTGAATCACACGCGACTGGAGCACGCTAAGACGTTATTGAAAGGCTATGACCTGAAGGTAAAAGAAGTGGCGCACGCCTGCGGCTTTGTCGACAGCAACTACTTCTGCCGTCTGTTTCGTAAAAACACCGAACGCTCGCCGTCGGAATATCGCCGGCAGTACCACAGCCAACTGACAGAAAAACCGACTACTCCAGAATAA", - "dna_sequence_length": 852, - "functions": [ - "AraC family putative transcriptional activator" - ], - "id": "CDS_3881", - "location": [ - [ - "NC_000913", - 4148317, - "-", - 852 - ] - ], - "md5": "46cf5ca659f102e675ab4bb88607b513", - "parent_gene": "", - "protein_md5": "72dc4284e0ec27f04b1861d61bb5e339", - "protein_translation": "MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE", - "protein_translation_length": 283, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3927" - ], - [ - "gene_synonym", - "GeneID:948458" - ], - [ - "gene_synonym", - "NP_418390.1" - ], - [ - "gene_synonym", - "b3955" - ], - [ - "gene_synonym", - "ECK3946" - ], - [ - "gene_synonym", - "EcoGene:EG11914" - ], - [ - "gene_synonym", - "yijP" - ], - [ - "gene_synonym", - "GI:16131793" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CB39" - ], - [ - "gene_synonym", - "cptA" - ], - [ - "gene_synonym", - "eptC" - ], - [ - "gene_synonym", - "ASAP:ABE-0012947" - ] - ], - "dna_sequence": "ATGCATTCCACAGAAGTCCAGGCTAAACCTCTTTTTAGCTGGAAAGCCCTGGGTTGGGCACTGCTCTACTTTTGGTTTTTCTCTACTCTGCTACAGGCCATTATTTACATCAGTGGTTATAGTGGCACTAACGGCATTCGCGACTCGCTGTTATTCAGTTCGCTGTGGTTGATCCCGGTATTCCTCTTTCCGAAGCGGATTAAAATTATTGCCGCAGTAATCGGCGTGGTGCTATGGGCGGCCTCTCTGGCGGCGCTGTGCTACTACGTCATCTACGGTCAGGAGTTCTCGCAGAGCGTTCTGTTTGTGATGTTCGAAACCAACACCAACGAAGCCAGCGAGTATTTAAGCCAGTATTTCAGCCTGAAAATTGTGCTTATCGCGCTGGCCTATACGGCGGTGGCAGTTCTGCTGTGGACACGCCTGCGCCCGGTCTATATTCCAAAGCCGTGGCGTTATGTTGTCTCTTTTGCCCTGCTTTATGGCTTGATTCTGCATCCGATCGCCATGAATACGTTTATCAAAAACAAGCCGTTTGAGAAAACGTTGGATAACCTGGCCTCGCGTATGGAGCCTGCCGCACCGTGGCAATTCCTGACCGGCTATTATCAGTATCGTCAGCAACTAAACTCGCTAACAAAGTTACTGAATGAAAATAATGCCTTGCCGCCACTGGCTAATTTCAAAGATGAATCGGGTAACGAACCGCGCACTTTAGTGCTGGTGATTGGCGAGTCGACCCAGCGCGGACGCATGAGTCTGTACGGTTATCCGCGTGAAACCACGCCGGAGCTGGATGCGCTGCATAAAACCGATCCGAATCTGACCGTGTTTAATAACGTAGTTACGTCTCGTCCGTACACCATTGAAATCCTGCAACAGGCGCTGACCTTTGCCAATGAAAAGAACCCGGATCTGTATCTGACGCAGCCGTCGCTGATGAACATGATGAAACAGGCGGGTTATAAAACCTTCTGGATCACCAACCAGCAGACGATGACCGCCCGCAATACCATGCTGACGGTATTTTCGCGCCAGACCGACAAGCAGTACTACATGAACCAGCAACGTACGCAGAGTGCGCGTGAATACGACACCAACGTGCTGAAGCCGTTCCAGGAAGTGCTGAATGACCCTGCGCCGAAGAAACTGATCATTGTTCATCTGCTGGGTACGCATATCAAATACAAATACCGCTACCCGGAAAATCAGGGCAAGTTTGATGGCAATACCGATCATGTTCCGCCGGGATTAAACGCGGAAGAGCTGGAGTCATATAACGATTATGACAACGCTAACCTGTATAACGATCATGTGGTTGCCAGCCTGATTAAAGACTTTAAAGCAGCAAACCCGAACGGTTTCCTGGTTTATTTCTCTGACCACGGTGAAGAGGTTTACGACACGCCGCCGCACAAAACTCAGGGGCGTAATGAGGACAACCCGACGCGTCATATGTACACCATTCCGTTCCTGCTGTGGACGTCAGAAAAATGGCAAGCGACTCATCCCCGTGATTTCTCGCAGGATGTTGATCGTAAATACAGCCTGGCGGAACTGATCCACACCTGGTCAGATTTGGCGGGCTTATCTTACGACGGTTACGATCCAACCCGTTCAGTGGTGAATCCGCAGTTCAAAGAAACTACCCGCTGGATTGGTAACCCGTATAAGAAAAACGCACTGATCGATTACGACACACTGCCCTATGGCGATCAGGTGGGTAATCAGTAA", - "dna_sequence_length": 1734, - "functions": [ - "LPS heptose I phosphoethanolamine transferase" - ], - "id": "CDS_3882", - "location": [ - [ - "NC_000913", - 4150265, - "-", - 1734 - ] - ], - "md5": "2bde36d574f9c70f8f44266e70c1b520", - "parent_gene": "", - "protein_md5": "9b0240ae4e2576655c91f9f764c43be2", - "protein_translation": "MHSTEVQAKPLFSWKALGWALLYFWFFSTLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVLWAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLLWTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIKNKPFEKTLDNLASRMEPAAPWQFLTGYYQYRQQLNSLTKLLNENNALPPLANFKDESGNEPRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPNLTVFNNVVTSRPYTIEILQQALTFANEKNPDLYLTQPSLMNMMKQAGYKTFWITNQQTMTARNTMLTVFSRQTDKQYYMNQQRTQSAREYDTNVLKPFQEVLNDPAPKKLIIVHLLGTHIKYKYRYPENQGKFDGNTDHVPPGLNAEELESYNDYDNANLYNDHVVASLIKDFKAANPNGFLVYFSDHGEEVYDTPPHKTQGRNEDNPTRHMYTIPFLLWTSEKWQATHPRDFSQDVDRKYSLAELIHTWSDLAGLSYDGYDPTRSVVNPQFKETTRWIGNPYKKNALIDYDTLPYGDQVGNQ", - "protein_translation_length": 577, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ppc" - ], - [ - "gene_synonym", - "NP_418391.1" - ], - [ - "gene_synonym", - "asp" - ], - [ - "gene_synonym", - "b3956" - ], - [ - "gene_synonym", - "ECK3947" - ], - [ - "gene_synonym", - "GeneID:948457" - ], - [ - "gene_synonym", - "JW3928" - ], - [ - "gene_synonym", - "EcoGene:EG10756" - ], - [ - "gene_synonym", - "ASAP:ABE-0012950" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00864" - ], - [ - "gene_synonym", - "glu" - ], - [ - "gene_synonym", - "GI:16131794" - ] - ], - "dna_sequence": "ATGAACGAACAATATTCCGCATTGCGTAGTAATGTCAGTATGCTCGGCAAAGTGCTGGGAGAAACCATCAAGGATGCGTTGGGAGAACACATTCTTGAACGCGTAGAAACTATCCGTAAGTTGTCGAAATCTTCACGCGCTGGCAATGATGCTAACCGCCAGGAGTTGCTCACCACCTTACAAAATTTGTCGAACGACGAGCTGCTGCCCGTTGCGCGTGCGTTTAGTCAGTTCCTGAACCTGGCCAACACCGCCGAGCAATACCACAGCATTTCGCCGAAAGGCGAAGCTGCCAGCAACCCGGAAGTGATCGCCCGCACCCTGCGTAAACTGAAAAACCAGCCGGAACTGAGCGAAGACACCATCAAAAAAGCAGTGGAATCGCTGTCGCTGGAACTGGTCCTCACGGCTCACCCAACCGAAATTACCCGTCGTACACTGATCCACAAAATGGTGGAAGTGAACGCCTGTTTAAAACAGCTCGATAACAAAGATATCGCTGACTACGAACACAACCAGCTGATGCGTCGCCTGCGCCAGTTGATCGCCCAGTCATGGCATACCGATGAAATCCGTAAGCTGCGTCCAAGCCCGGTAGATGAAGCCAAATGGGGCTTTGCCGTAGTGGAAAACAGCCTGTGGCAAGGCGTACCAAATTACCTGCGCGAACTGAACGAACAACTGGAAGAGAACCTCGGCTACAAACTGCCCGTCGAATTTGTTCCGGTCCGTTTTACTTCGTGGATGGGCGGCGACCGCGACGGCAACCCGAACGTCACTGCCGATATCACCCGCCACGTCCTGCTACTCAGCCGCTGGAAAGCCACCGATTTGTTCCTGAAAGATATTCAGGTGCTGGTTTCTGAACTGTCGATGGTTGAAGCGACCCCTGAACTGCTGGCGCTGGTTGGCGAAGAAGGTGCCGCAGAACCGTATCGCTATCTGATGAAAAACCTGCGTTCTCGCCTGATGGCGACACAGGCATGGCTGGAAGCGCGCCTGAAAGGCGAAGAACTGCCAAAACCAGAAGGCCTGCTGACACAAAACGAAGAACTGTGGGAACCGCTCTACGCTTGCTACCAGTCACTTCAGGCGTGTGGCATGGGTATTATCGCCAACGGCGATCTGCTCGACACCCTGCGCCGCGTGAAATGTTTCGGCGTACCGCTGGTCCGTATTGATATCCGTCAGGAGAGCACGCGTCATACCGAAGCGCTGGGCGAGCTGACCCGCTACCTCGGTATCGGCGACTACGAAAGCTGGTCAGAGGCCGACAAACAGGCGTTCCTGATCCGCGAACTGAACTCCAAACGTCCGCTTCTGCCGCGCAACTGGCAACCAAGCGCCGAAACGCGCGAAGTGCTCGATACCTGCCAGGTGATTGCCGAAGCACCGCAAGGCTCCATTGCCGCCTACGTGATCTCGATGGCGAAAACGCCGTCCGACGTACTGGCTGTCCACCTGCTGCTGAAAGAAGCGGGTATCGGGTTTGCGATGCCGGTTGCTCCGCTGTTTGAAACCCTCGATGATCTGAACAACGCCAACGATGTCATGACCCAGCTGCTCAATATTGACTGGTATCGTGGCCTGATTCAGGGCAAACAGATGGTGATGATTGGCTATTCCGACTCAGCAAAAGATGCGGGAGTGATGGCAGCTTCCTGGGCGCAATATCAGGCACAGGATGCATTAATCAAAACCTGCGAAAAAGCGGGTATTGAGCTGACGTTGTTCCACGGTCGCGGCGGTTCCATTGGTCGCGGCGGCGCACCTGCTCATGCGGCGCTGCTGTCACAACCGCCAGGAAGCCTGAAAGGCGGCCTGCGCGTAACCGAACAGGGCGAGATGATCCGCTTTAAATATGGTCTGCCAGAAATCACCGTCAGCAGCCTGTCGCTTTATACCGGGGCGATTCTGGAAGCCAACCTGCTGCCACCGCCGGAGCCGAAAGAGAGCTGGCGTCGCATTATGGATGAACTGTCAGTCATCTCCTGCGATGTCTACCGCGGCTACGTACGTGAAAACAAAGATTTTGTGCCTTACTTCCGCTCCGCTACGCCGGAACAAGAACTGGGCAAACTGCCGTTGGGTTCACGTCCGGCGAAACGTCGCCCAACCGGCGGCGTCGAGTCACTACGCGCCATTCCGTGGATCTTCGCCTGGACGCAAAACCGTCTGATGCTCCCCGCCTGGCTGGGTGCAGGTACGGCGCTGCAAAAAGTGGTCGAAGACGGCAAACAGAGCGAGCTGGAGGCTATGTGCCGCGATTGGCCATTCTTCTCGACGCGTCTCGGCATGCTGGAGATGGTCTTCGCCAAAGCAGACCTGTGGCTGGCGGAATACTATGACCAACGCCTGGTAGACAAAGCACTGTGGCCGTTAGGTAAAGAGTTACGCAACCTGCAAGAAGAAGACATCAAAGTGGTGCTGGCGATTGCCAACGATTCCCATCTGATGGCCGATCTGCCGTGGATTGCAGAGTCTATTCAGCTACGGAATATTTACACCGACCCGCTGAACGTATTGCAGGCCGAGTTGCTGCACCGCTCCCGCCAGGCAGAAAAAGAAGGCCAGGAACCGGATCCTCGCGTCGAACAAGCGTTAATGGTCACTATTGCCGGGATTGCGGCAGGTATGCGTAATACCGGCTAA", - "dna_sequence_length": 2652, - "functions": [ - "phosphoenolpyruvate carboxylase" - ], - "id": "CDS_3883", - "location": [ - [ - "NC_000913", - 4153098, - "-", - 2652 - ] - ], - "md5": "6faade0604faa6472193d7cf8e89ec90", - "parent_gene": "", - "protein_md5": "a75fa3e22c2a164e8d5632867b4e2dd8", - "protein_translation": "MNEQYSALRSNVSMLGKVLGETIKDALGEHILERVETIRKLSKSSRAGNDANRQELLTTLQNLSNDELLPVARAFSQFLNLANTAEQYHSISPKGEAASNPEVIARTLRKLKNQPELSEDTIKKAVESLSLELVLTAHPTEITRRTLIHKMVEVNACLKQLDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWQGVPNYLRELNEQLEENLGYKLPVEFVPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKATDLFLKDIQVLVSELSMVEATPELLALVGEEGAAEPYRYLMKNLRSRLMATQAWLEARLKGEELPKPEGLLTQNEELWEPLYACYQSLQACGMGIIANGDLLDTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLPEITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDVYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKELRNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQAEKEGQEPDPRVEQALMVTIAGIAAGMRNTG", - "protein_translation_length": 883, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3957" - ], - [ - "gene_synonym", - "ECK3948" - ], - [ - "gene_synonym", - "Arg4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23908" - ], - [ - "gene_synonym", - "JW3929" - ], - [ - "gene_synonym", - "GeneID:948456" - ], - [ - "gene_synonym", - "NP_418392.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0012955" - ], - [ - "gene_synonym", - "argA" - ], - [ - "gene_synonym", - "argE" - ], - [ - "gene_synonym", - "GI:16131795" - ], - [ - "gene_synonym", - "EcoGene:EG11286" - ] - ], - "dna_sequence": "ATGAAAAACAAATTACCGCCATTTATCGAGATTTACCGCGCTCTGATTGCCACACCTTCAATAAGCGCCACGGAAGAGGCACTCGATCAAAGCAATGCAGATTTAATCACTCTGCTGGCGGACTGGTTTAAAGATTTGGGCTTCAATGTGGAAGTGCAGCCTGTTCCAGGAACTCGCAACAAATTCAATATGCTGGCAAGTATCGGACAGGGGGCTGGCGGCTTGTTGCTGGCGGGGCATACCGATACGGTGCCATTTGATGACGGTCGCTGGACGCGCGATCCGTTTACACTGACGGAGCATGACGGCAAGCTTTACGGCTTAGGCACCGCCGACATGAAAGGCTTTTTTGCGTTTATCCTTGATGCGCTACGCGATGTCGACGTCACGAAACTGAAAAAACCGCTCTACATTCTGGCGACTGCTGATGAAGAAACCAGTATGGCCGGAGCGCGTTATTTTGCCGAAACTACCGCCCTGCGCCCGGATTGCGCCATCATTGGCGAACCGACGTCACTACAACCGGTACGCGCACATAAAGGTCATATCTCTAACGCCATCCGTATTCAGGGCCAGTCGGGGCACTCCAGCGATCCAGCACGCGGAGTTAACGCTATCGAACTAATGCACGACGCCATCGGGCATATTTTGCAATTGCGCGATAACCTGAAAGAACGTTATCACTACGAAGCGTTTACCGTGCCATACCCTACGCTCAACCTCGGGCATATTCACGGTGGCGACGCTTCTAACCGTATTTGCGCTTGCTGTGAGTTGCATATGGATATTCGTCCGCTGCCTGGCATGACACTCAATGAACTTAATGGTTTGCTCAACGATGCATTGGCTCCGGTGAGCGAACGCTGGCCGGGTCGTCTGACGGTCGACGAGCTGCATCCGCCGATCCCTGGCTATGAATGCCCACCGAATCATCAACTGGTTGAAGTGGTTGAGAAATTGCTCGGAGCAAAAACCGAAGTGGTGAACTACTGTACCGAAGCGCCGTTTATTCAAACGTTATGCCCGACGCTGGTGTTGGGGCCTGGCTCAATTAATCAGGCTCATCAACCTGATGAATATCTGGAAACACGGTTTATCAAGCCCACCCGCGAACTGATAACCCAGGTAATTCACCATTTTTGCTGGCATTAA", - "dna_sequence_length": 1152, - "functions": [ - "acetylornithine deacetylase" - ], - "id": "CDS_3884", - "location": [ - [ - "NC_000913", - 4154847, - "-", - 1152 - ] - ], - "md5": "10fb53ae3cfcc3050ca18ad91ca69eb8", - "parent_gene": "", - "protein_md5": "92a37e9240f942f7c12447ad1e114e82", - "protein_translation": "MKNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEVQPVPGTRNKFNMLASIGQGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILDALRDVDVTKLKKPLYILATADEETSMAGARYFAETTALRPDCAIIGEPTSLQPVRAHKGHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQLRDNLKERYHYEAFTVPYPTLNLGHIHGGDASNRICACCELHMDIRPLPGMTLNELNGLLNDALAPVSERWPGRLTVDELHPPIPGYECPPNHQLVEVVEKLLGAKTEVVNYCTEAPFIQTLCPTLVLGPGSINQAHQPDEYLETRFIKPTRELITQVIHHFCWH", - "protein_translation_length": 383, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0012964" - ], - [ - "gene_synonym", - "EcoGene:EG10065" - ], - [ - "gene_synonym", - "JW3930" - ], - [ - "gene_synonym", - "b3958" - ], - [ - "gene_synonym", - "ECK3949" - ], - [ - "gene_synonym", - "Arg2" - ], - [ - "gene_synonym", - "GeneID:948455" - ], - [ - "gene_synonym", - "argH" - ], - [ - "gene_synonym", - "NP_418393.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11446" - ], - [ - "gene_synonym", - "argC" - ], - [ - "gene_synonym", - "GI:16131796" - ] - ], - "dna_sequence": "ATGTTGAATACGCTGATTGTGGGTGCCAGCGGCTACGCTGGCGCAGAGCTAGTGACCTATGTAAATCGCCATCCGCATATGAACATAACCGCTTTGACTGTTTCAGCGCAAAGCAATGATGCGGGAAAGTTAATCTCCGATTTGCATCCGCAGCTAAAAGGCATCGTTGATCTGCCGTTGCAGCCGATGTCGGATATCAGCGAGTTTAGCCCAGGGGTGGACGTAGTGTTTCTCGCCACCGCCCATGAAGTTAGCCACGATTTAGCGCCGCAGTTTCTTGAAGCGGGCTGCGTGGTGTTCGACCTTTCCGGCGCGTTTCGTGTTAACGACGCCACCTTCTATGAAAAATATTACGGCTTTACCCATCAATACCCGGAACTGTTGGAACAGGCAGCCTACGGTCTGGCGGAGTGGTGCGGTAATAAATTAAAAGAAGCGAATTTGATTGCGGTGCCGGGCTGTTATCCGACGGCGGCACAGCTGGCGCTGAAACCGTTGATTGATGCCGATCTTCTTGACCTCAATCAGTGGCCGGTGATCAACGCCACCAGCGGCGTGAGCGGTGCAGGGCGTAAAGCGGCCATTTCAAACAGCTTTTGTGAAGTTAGCCTGCAACCGTATGGCGTCTTTACTCATCGCCATCAACCAGAGATCGCCACACACCTCGGTGCTGACGTTATCTTCACCCCACATCTGGGCAATTTCCCGCGCGGCATTCTCGAAACCATTACCTGCCGCCTGAAATCGGGTGTGACCCAGGCGCAAGTCGCGCAAGTGTTACAGCAGGCGTATGCCCATAAACCGCTGGTGCGGCTGTATGACAAAGGCGTTCCGGCGCTGAAAAATGTCGTTGGGCTGCCATTTTGCGATATCGGGTTTGCCGTTCAGGGCGAGCATCTGATTATTGTGGCGACCGAAGACAACTTACTGAAAGGCGCGGCGGCACAAGCGGTACAGTGCGCCAATATTCGTTTCGGCTATGCGGAAACGCAGTCTCTTATTTAA", - "dna_sequence_length": 1005, - "functions": [ - "N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding" - ], - "id": "CDS_3885", - "location": [ - [ - "NC_000913", - 4155001, - "+", - 1005 - ] - ], - "md5": "2d021485d83dae845f435026b8ae2371", - "parent_gene": "", - "protein_md5": "b76faea9356a1aac5ab1bb5cb8a75ff7", - "protein_translation": "MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEIATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQVLQQAYAHKPLVRLYDKGVPALKNVVGLPFCDIGFAVQGEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI", - "protein_translation_length": 334, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10064" - ], - [ - "gene_synonym", - "ECK3950" - ], - [ - "gene_synonym", - "b3959" - ], - [ - "gene_synonym", - "GeneID:948464" - ], - [ - "gene_synonym", - "JW5553" - ], - [ - "gene_synonym", - "ASAP:ABE-0012967" - ], - [ - "gene_synonym", - "GI:145698337" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6C8" - ], - [ - "gene_synonym", - "NP_418394.3" - ], - [ - "gene_synonym", - "argB" - ] - ], - "dna_sequence": "ATGATGAATCCATTAATTATCAAACTGGGCGGCGTACTGCTGGATAGTGAAGAGGCGCTGGAACGTCTGTTTAGCGCACTGGTGAATTATCGTGAGTCACATCAGCGTCCGCTGGTGATTGTGCACGGCGGCGGTTGCGTGGTGGATGAGCTGATGAAAGGGCTGAATCTGCCGGTGAAAAAGAAAAACGGCCTGCGGGTGACGCCTGCTGATCAGATAGACATTATCACCGGAGCACTGGCGGGAACGGCAAATAAAACCCTGTTGGCATGGGCGAAGAAACATCAGATTGCGGCCGTAGGTTTGTTTCTCGGTGACGGCGACAGCGTCAAAGTGACCCAGCTTGATGAAGAGTTAGGTCATGTTGGACTGGCGCAGCCAGGTTCGCCTAAGCTTATCAACTCCTTGCTGGAGAACGGTTATCTGCCGGTGGTCAGCTCCATTGGCGTAACAGACGAAGGGCAACTGATGAACGTCAATGCCGACCAGGCGGCAACGGCGCTGGCGGCAACGCTGGGCGCGGATCTGATTTTGCTCTCCGACGTCAGCGGCATTCTCGACGGCAAAGGGCAACGCATTGCCGAAATGACCGCCGCGAAAGCAGAACAACTGATTGAGCAGGGCATTATTACTGACGGCATGATAGTGAAAGTGAACGCGGCGCTGGATGCGGCCCGCACGCTGGGCCGTCCGGTAGATATCGCCTCCTGGCGTCATGCGGAGCAGCTTCCGGCACTGTTTAACGGTATGCCGATGGGTACGCGGATTTTAGCTTAA", - "dna_sequence_length": 777, - "functions": [ - "acetylglutamate kinase" - ], - "id": "CDS_3886", - "location": [ - [ - "NC_000913", - 4156013, - "+", - 777 - ] - ], - "md5": "83a7e7b75d6926d297e3b99e063579d6", - "parent_gene": "", - "protein_md5": "c286455726fee736ab7098a9f1cab5aa", - "protein_translation": "MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA", - "protein_translation_length": 258, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11223" - ], - [ - "gene_synonym", - "ECK3951" - ], - [ - "gene_synonym", - "JW3932" - ], - [ - "gene_synonym", - "NP_418395.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11447" - ], - [ - "gene_synonym", - "GeneID:948463" - ], - [ - "gene_synonym", - "argH" - ], - [ - "gene_synonym", - "GI:16131798" - ], - [ - "gene_synonym", - "b3960" - ], - [ - "gene_synonym", - "ASAP:ABE-0012969" - ] - ], - "dna_sequence": "ATGGCACTTTGGGGCGGGCGTTTTACCCAGGCAGCAGATCAACGGTTCAAACAATTCAACGACTCACTGCGCTTTGATTACCGTCTGGCGGAGCAGGATATTGTTGGCTCTGTGGCCTGGTCCAAAGCCCTGGTCACGGTAGGCGTGTTAACCGCAGAAGAGCAGGCGCAACTGGAAGAGGCGCTGAACGTGTTGCTGGAAGATGTTCGCGCCAGGCCACAACAAATCCTTGAAAGCGACGCCGAAGATATCCATAGCTGGGTGGAAGGCAAACTGATCGACAAAGTGGGCCAGTTAGGCAAAAAGCTGCATACCGGGCGTAGCCGTAATGATCAGGTAGCGACTGACCTGAAACTGTGGTGCAAAGATACCGTTAGCGAGTTACTGACGGCTAACCGGCAGCTGCAATCGGCGCTGGTGGAAACCGCACAAAACAATCAGGACGCGGTAATGCCAGGTTACACTCACCTGCAACGCGCCCAGCCGGTGACGTTCGCGCACTGGTGCCTGGCCTATGTTGAGATGCTGGCGCGTGATGAAAGCCGTTTGCAGGATGCGCTTAAGCGTCTGGATGTCAGCCCGCTAGGCTGTGGCGCGCTGGCGGGAACGGCCTATGAAATCGACCGTGAACAGTTAGCAGGCTGGCTGGGCTTTGCTTCGGCGACCCGTAACAGTCTCGACAGCGTTTCTGACCGTGACCATGTGTTGGAACTGCTTTCTGCTGCCGCTATCGGCATGGTGCATCTGTCGCGTTTTGCTGAAGATCTGATTTTCTTTAACACCGGCGAAGCGGGGTTTGTGGAGCTTTCTGACCGCGTGACTTCCGGTTCATCATTAATGCCGCAGAAGAAAAACCCGGATGCGCTGGAGCTGATTCGCGGTAAATGCGGCCGGGTGCAGGGGGCGTTAACCGGCATGATGATGACGCTGAAAGGTTTGCCGCTGGCTTACAACAAAGATATGCAGGAAGACAAAGAAGGTCTGTTCGACGCGCTCGATACCTGGCTGGACTGCCTGCATATGGCGGCGCTGGTGCTGGACGGCATTCAGGTGAAACGTCCACGTTGCCAGGAAGCGGCTCAGCAGGGTTACGCCAACGCCACCGAACTGGCGGATTATCTGGTGGCGAAAGGCGTACCGTTCCGCGAGGCGCACCATATTGTTGGTGAAGCGGTGGTGGAAGCCATTCGTCAGGGCAAACCGCTGGAAGATCTGCCGCTCAGTGAGTTGCAGAAATTCAGTCAGGTGATTGACGAAGATGTCTATCCGATTCTGTCGCTGCAATCGTGCCTCGACAAGCGTGCGGCAAAAGGCGGCGTCTCACCGCAGCAGGTGGCGCAGGCGATTGCTTTTGCGCAGGCTCGGTTAGGGTAA", - "dna_sequence_length": 1374, - "functions": [ - "argininosuccinate lyase" - ], - "id": "CDS_3887", - "location": [ - [ - "NC_000913", - 4156850, - "+", - 1374 - ] - ], - "md5": "95f848a225524f958378a6cc9856cf33", - "parent_gene": "", - "protein_md5": "7442579a7f9797c55678402dbb898539", - "protein_translation": "MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPLSELQKFSQVIDEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIAFAQARLG", - "protein_translation_length": 457, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3953" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACQ4" - ], - [ - "gene_synonym", - "oxyR" - ], - [ - "gene_synonym", - "JW3933" - ], - [ - "gene_synonym", - "EcoGene:EG10681" - ], - [ - "gene_synonym", - "mor" - ], - [ - "gene_synonym", - "NP_418396.1" - ], - [ - "gene_synonym", - "GeneID:948462" - ], - [ - "gene_synonym", - "GI:16131799" - ], - [ - "gene_synonym", - "ASAP:ABE-0012973" - ], - [ - "gene_synonym", - "momR" - ], - [ - "gene_synonym", - "b3961" - ] - ], - "dna_sequence": "ATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCGGGAATGCTGCTGGTGGATCAGGCGCGTACCGTGCTGCGTGAGGTGAAAGTCCTTAAAGAGATGGCAAGCCAGCAGGGCGAGACGATGTCCGGACCGCTGCACATTGGTTTGATTCCCACAGTTGGACCGTACCTGCTACCGCATATTATCCCTATGCTGCACCAGACCTTTCCAAAGCTGGAAATGTATCTGCATGAAGCACAGACCCACCAGTTACTGGCGCAACTGGACAGCGGCAAACTCGATTGCGTGATCCTCGCGCTGGTGAAAGAGAGCGAAGCATTCATTGAAGTGCCGTTGTTTGATGAGCCAATGTTGCTGGCTATCTATGAAGATCACCCGTGGGCGAACCGCGAATGCGTACCGATGGCCGATCTGGCAGGGGAAAAACTGCTGATGCTGGAAGATGGTCACTGTTTGCGCGATCAGGCAATGGGTTTCTGTTTTGAAGCCGGGGCGGATGAAGATACACACTTCCGCGCGACCAGCCTGGAAACTCTGCGCAACATGGTGGCGGCAGGTAGCGGGATCACTTTACTGCCAGCGCTGGCTGTGCCGCCGGAGCGCAAACGCGATGGGGTTGTTTATCTGCCGTGCATTAAGCCGGAACCACGCCGCACTATTGGCCTGGTTTATCGTCCTGGCTCACCGCTGCGCAGCCGCTATGAGCAGCTGGCAGAGGCCATCCGCGCAAGAATGGATGGCCATTTCGATAAAGTTTTAAAACAGGCGGTTTAA", - "dna_sequence_length": 918, - "functions": [ - "oxidative and nitrosative stress transcriptional regulator" - ], - "id": "CDS_3888", - "location": [ - [ - "NC_000913", - 4158490, - "+", - 918 - ] - ], - "md5": "6d88aaf9634c171d7d9e840892cde87f", - "parent_gene": "", - "protein_md5": "01f7ef453121c0bb818ead6a5da9a2b6", - "protein_translation": "MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAGMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANRECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLLPALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDGHFDKVLKQAV", - "protein_translation_length": 305, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3954" - ], - [ - "gene_synonym", - "sthA" - ], - [ - "gene_synonym", - "sth" - ], - [ - "gene_synonym", - "udhA" - ], - [ - "gene_synonym", - "JW5551" - ], - [ - "gene_synonym", - "GI:90111670" - ], - [ - "gene_synonym", - "ASAP:ABE-0012975" - ], - [ - "gene_synonym", - "NP_418397.2" - ], - [ - "gene_synonym", - "GeneID:948461" - ], - [ - "gene_synonym", - "EcoGene:EG11428" - ], - [ - "gene_synonym", - "b3962" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27306" - ] - ], - "dna_sequence": "ATGCCACATTCCTACGATTACGATGCCATAGTAATAGGTTCCGGCCCCGGCGGCGAAGGCGCTGCAATGGGCCTGGTTAAGCAAGGTGCGCGCGTCGCAGTTATCGAGCGTTATCAAAATGTTGGCGGCGGTTGCACCCACTGGGGCACCATCCCGTCGAAAGCTCTCCGTCACGCCGTCAGCCGCATTATAGAATTCAATCAAAACCCACTTTACAGCGACCATTCCCGACTGCTCCGCTCTTCTTTTGCCGATATCCTTAACCATGCCGATAACGTGATTAATCAACAAACGCGCATGCGTCAGGGATTTTACGAACGTAATCACTGTGAAATATTGCAGGGAAACGCTCGCTTTGTTGACGAGCATACGTTGGCGCTGGATTGCCCGGACGGCAGCGTTGAAACACTAACCGCTGAAAAATTTGTTATTGCCTGCGGCTCTCGTCCATATCATCCAACAGATGTTGATTTCACCCATCCACGCATTTACGACAGCGACTCAATTCTCAGCATGCACCACGAACCGCGCCATGTACTTATCTATGGTGCTGGAGTGATCGGCTGTGAATATGCGTCGATCTTCCGCGGTATGGATGTAAAAGTGGATCTGATCAACACCCGCGATCGCCTGCTGGCATTTCTCGATCAAGAGATGTCAGATTCTCTCTCCTATCACTTCTGGAACAGTGGCGTAGTGATTCGTCACAACGAAGAGTACGAGAAGATCGAAGGCTGTGACGATGGTGTGATCATGCATCTGAAGTCGGGTAAAAAACTGAAAGCTGACTGCCTGCTCTATGCCAACGGTCGCACCGGTAATACCGATTCGCTGGCGTTACAGAACATTGGGCTAGAAACTGACAGCCGCGGACAGCTGAAGGTCAACAGCATGTATCAGACCGCACAGCCACACGTTTACGCGGTGGGCGACGTGATTGGTTATCCGAGCCTGGCGTCGGCGGCCTATGACCAGGGGCGCATTGCCGCGCAGGCGCTGGTAAAAGGCGAAGCCACCGCACATCTGATTGAAGATATCCCTACCGGTATTTACACCATCCCGGAAATCAGCTCTGTGGGCAAAACCGAACAGCAGCTGACCGCAATGAAAGTGCCATATGAAGTGGGCCGCGCCCAGTTTAAACATCTGGCACGCGCACAAATCGTCGGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGTATTCACTGCTTTGGCGAGCGCGCTGCCGAAATTATTCATATCGGTCAGGCGATTATGGAACAGAAAGGTGGCGGCAACACTATTGAGTACTTCGTCAACACCACCTTTAACTACCCGACGATGGCGGAAGCCTATCGGGTAGCTGCGTTAAACGGTTTAAACCGCCTGTTTTAA", - "dna_sequence_length": 1401, - "functions": [ - "pyridine nucleotide transhydrogenase, soluble" - ], - "id": "CDS_3889", - "location": [ - [ - "NC_000913", - 4160790, - "-", - 1401 - ] - ], - "md5": "062604c19d5160122a86bae3f35a8d3a", - "parent_gene": "", - "protein_md5": "b41e72a4c433caa23623d4acc83b24c6", - "protein_translation": "MPHSYDYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGGCTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQGFYERNHCEILQGNARFVDEHTLALDCPDGSVETLTAEKFVIACGSRPYHPTDVDFTHPRIYDSDSILSMHHEPRHVLIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEYEKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTDSLALQNIGLETDSRGQLKVNSMYQTAQPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF", - "protein_translation_length": 466, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yijC" - ], - [ - "gene_synonym", - "ECK3955" - ], - [ - "gene_synonym", - "fabR" - ], - [ - "gene_synonym", - "GeneID:948460" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACU5" - ], - [ - "gene_synonym", - "JW3935" - ], - [ - "gene_synonym", - "EcoGene:EG11394" - ], - [ - "gene_synonym", - "b3963" - ], - [ - "gene_synonym", - "GI:145698338" - ], - [ - "gene_synonym", - "ASAP:ABE-0012979" - ], - [ - "gene_synonym", - "NP_418398.2" - ] - ], - "dna_sequence": "ATGGGCGTAAGAGCGCAACAAAAAGAAAAAACCCGCCGTTCGCTGGTGGAAGCCGCATTTAGCCAATTAAGTGCTGAACGCAGCTTCGCCAGCCTGAGTTTGCGTGAAGTGGCGCGTGAAGCGGGCATTGCTCCCACCTCTTTTTATCGGCATTTCCGCGACGTAGACGAACTGGGTCTGACCATGGTTGATGAGAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAATGGTGACAATTGTCTTCAGTGCGGGTGCCGAGGCGTTGGACGTCGGCGTCGAACAACGTCGGCAATTAGAAGAGCGACTGGTACTGCAACTGCGAATGATTTCGAAAGGGGCTTATTACTGGTATCGCCGTGAACAAGAGAAAACCGCAATTATTCCGGGAAATGTGAAGGACGAGTAA", - "dna_sequence_length": 648, - "functions": [ - "transcriptional repressor of fabA and fabB" - ], - "id": "CDS_3890", - "location": [ - [ - "NC_000913", - 4161124, - "+", - 648 - ] - ], - "md5": "c4374daf3af2f9cfce7362f14453c7f5", - "parent_gene": "", - "protein_md5": "9c884acd7dfaecc39e28e2c4116eac1d", - "protein_translation": "MGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGIAPTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGNNPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVTIVFSAGAEALDVGVEQRRQLEERLVLQLRMISKGAYYWYRREQEKTAIIPGNVKDE", - "protein_translation_length": 215, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3936" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF40" - ], - [ - "gene_synonym", - "GeneID:948459" - ], - [ - "gene_synonym", - "yijD" - ], - [ - "gene_synonym", - "ECK3956" - ], - [ - "gene_synonym", - "GI:16131802" - ], - [ - "gene_synonym", - "EcoGene:EG11395" - ], - [ - "gene_synonym", - "ASAP:ABE-0012981" - ], - [ - "gene_synonym", - "NP_418399.1" - ], - [ - "gene_synonym", - "b3964" - ] - ], - "dna_sequence": "ATGAAACAAGCAAATCAAGATAGAGGTACGCTGCTGCTGGCGTTAGTTGCTGGCTTATCGATTAATGGTACTTTCGCAGCGCTGTTTAGCTCCATTGTGCCATTTTCTGTATTCCCGATTATTTCCCTGGTGCTGACGGTTTACTGCCTGCATCAACGTTATCTTAATCGCACTATGCCGGTAGGCTTGCCGGGTCTGGCAGCTGCCTGTTTTATTCTCGGCGTACTGCTGTACAGCACGGTAGTTCGTGCGGAATATCCGGATATCGGCTCTAACTTCTTCCCGGCAGTACTCTCCGTCATTATGGTGTTCTGGATTGGCGCGAAGATGCGTAACCGTAAGCAGGAAGTTGCTGAGTAA", - "dna_sequence_length": 360, - "functions": [ - "DUF1422 family inner membrane protein" - ], - "id": "CDS_3891", - "location": [ - [ - "NC_000913", - 4161771, - "+", - 360 - ] - ], - "md5": "34dbf983352888e1154eb4dcba8e2f27", - "parent_gene": "", - "protein_md5": "2f6db36b7105d20f193c42038f4a3b07", - "protein_translation": "MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLVLTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIMVFWIGAKMRNRKQEVAE", - "protein_translation_length": 119, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3937" - ], - [ - "gene_synonym", - "ECK3957" - ], - [ - "gene_synonym", - "rumT" - ], - [ - "gene_synonym", - "EcoGene:EG11022" - ], - [ - "gene_synonym", - "trmA" - ], - [ - "gene_synonym", - "GI:16131803" - ], - [ - "gene_synonym", - "ASAP:ABE-0012983" - ], - [ - "gene_synonym", - "NP_418400.1" - ], - [ - "gene_synonym", - "GeneID:947143" - ], - [ - "gene_synonym", - "b3965" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23003" - ] - ], - "dna_sequence": "ATGACCCCCGAACACCTTCCAACAGAACAGTATGAAGCGCAGTTAGCCGAAAAAGTGGTACGTTTGCAAAGTATGATGGCACCGTTTTCTGACCTGGTTCCGGAAGTGTTTCGCTCGCCGGTCAGTCATTACCGGATGCGCGCGGAGTTCCGCATCTGGCACGATGGCGATGACCTGTATCACATCATTTTCGATCAACAAACCAAAAGCCGCATCCGCGTGGATAGCTTCCCCGCCGCCAGTGAACTTATCAACCAGTTGATGACGGCGATGATTGCGGGTGTGCGTAATAATCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCGGAGGCCCTGCGCGATGCACTGCGCGCGCAGAATCTGAATGTGCATCTGATTGGTCGGGCAACGAAAACCAAAATCGAGCTGGATCAGGATTACATCGATGAACGTCTGCCGGTCGCAGGGAAAGAGATGATCTACCGTCAGGTAGAAAACAGCTTTACCCAGCCGAACGCGGCGATGAATATTCAGATGCTGGAATGGGCGCTGGACGTAACCAAAGGCTCAAAAGGCGATTTACTGGAGCTGTACTGCGGCAACGGTAACTTTTCATTAGCGCTGGCGCGTAATTTTGATCGGGTATTAGCCACCGAAATCGCTAAGCCGTCGGTTGCTGCTGCGCAATACAACATCGCAGCTAACCATATTGATAACGTACAAATTATTCGTATGGCGGCAGAAGAATTTACTCAGGCGATGAATGGTGTGCGCGAGTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTATCCGCGTATTTTGTACATCTCCTGTAACCCGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGCTCTGTTTGATCAGTTCCCCTACACGCACCATATGGAGTGCGGCGTATTACTGACCGCGAAGTAA", - "dna_sequence_length": 1101, - "functions": [ - "tRNA m(5)U54 methyltransferase, SAM-dependent", - "tmRNA m(5)U341 methyltransferase" - ], - "id": "CDS_3892", - "location": [ - [ - "NC_000913", - 4163270, - "-", - 1101 - ] - ], - "md5": "42db6c32569c4cfed3cb31df7eb7fcc2", - "parent_gene": "", - "protein_md5": "4e283760d8ea01febd28a43dd22d064c", - "protein_translation": "MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHYRMRAEFRIWHDGDDLYHIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPVLRHKLFQIDYLTTLSNQAVVSLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTKIELDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLSQTHKVERLALFDQFPYTHHMECGVLLTAK", - "protein_translation_length": 366, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10126" - ], - [ - "gene_synonym", - "NP_418401.1" - ], - [ - "gene_synonym", - "bfe" - ], - [ - "gene_synonym", - "GeneID:948468" - ], - [ - "gene_synonym", - "ECK3958" - ], - [ - "gene_synonym", - "JW3938" - ], - [ - "gene_synonym", - "btuB" - ], - [ - "gene_synonym", - "ASAP:ABE-0012987" - ], - [ - "gene_synonym", - "GI:16131804" - ], - [ - "gene_synonym", - "cer" - ], - [ - "gene_synonym", - "dcrC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06129" - ], - [ - "gene_synonym", - "b3966" - ] - ], - "dna_sequence": "ATGATTAAAAAAGCTTCGCTGCTGACGGCGTGTTCCGTCACGGCATTTTCCGCTTGGGCACAGGATACCAGCCCGGATACTCTCGTCGTTACTGCTAACCGTTTTGAACAGCCGCGCAGCACTGTGCTTGCACCAACCACCGTTGTGACCCGTCAGGATATCGACCGCTGGCAGTCGACCTCGGTCAATGATGTGCTGCGCCGTCTTCCGGGCGTCGATATCACCCAAAACGGCGGTTCAGGTCAGCTCTCATCTATTTTTATTCGCGGTACAAATGCCAGTCATGTGTTGGTGTTAATTGATGGCGTACGCCTGAATCTGGCGGGGGTGAGTGGTTCTGCCGACCTTAGCCAGTTCCCTATTGCGCTTGTCCAGCGTGTTGAATATATCCGTGGGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGCAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGATTATGCCCATACTCATGGTTATGATGTTGTTGCCTATGGTAATACCGGAACGCAAGCGCAGACAGATAACGATGGTTTTTTAAGTAAAACGCTTTATGGCGCGCTGGAGCATAACTTTACTGATGCCTGGAGCGGCTTTGTGCGCGGCTATGGCTATGATAACCGTACCAATTATGACGCGTATTATTCTCCCGGTTCACCGTTGCTCGATACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTAGTATTGGTGCGGGTGTCGACTGGCAGAAACAGACTACGACGCCGGGTACAGGTTATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGCAGTGACGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGACATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGCGCGTTTGAAGGCTTAACCGCTGGGGTGAACTGGCGTATTTCCGGATATCGTAACGATGTCAGTGACTTGATCGATTATGATGATCACACCCTGAAATATTACAACGAAGGGAAAGCGCGGATTAAGGGCGTCGAGGCGACCGCCAATTTTGATACCGGACCACTGACGCATACTGTGAGTTATGATTATGTCGATGCGCGCAATGCGATTACCGACACGCCGTTGTTACGCCGTGCTAAACAGCAGGTGAAATACCAGCTCGACTGGCAGTTGTATGACTTCGACTGGGGTATTACTTATCAGTATTTAGGCACTCGCTATGATAAGGATTACTCATCTTATCCTTATCAAACCGTTAAAATGGGCGGTGTGAGCTTGTGGGATCTTGCGGTTGCGTATCCGGTCACCTCTCACCTGACAGTTCGTGGTAAAATAGCCAACCTGTTCGACAAAGATTATGAGACAGTCTATGGCTACCAAACTGCAGGACGGGAATACACCTTGTCTGGCAGCTACACCTTCTGA", 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"type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "murI" - ], - [ - "gene_synonym", - "dga" - ], - [ - "gene_synonym", - "EcoGene:EG11204" - ], - [ - "gene_synonym", - "yijA" - ], - [ - "gene_synonym", - "NP_418402.2" - ], - [ - "gene_synonym", - "ECK3959" - ], - [ - "gene_synonym", - "JW5550" - ], - [ - "gene_synonym", - "GeneID:948467" - ], - [ - "gene_synonym", - "GI:90111671" - ], - [ - "gene_synonym", - "glr" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P22634" - ], - [ - "gene_synonym", - "b3967" - ], - [ - "gene_synonym", - "ASAP:ABE-0012989" - ] - ], - "dna_sequence": "ATGGCTACCAAACTGCAGGACGGGAATACACCTTGTCTGGCAGCTACACCTTCTGAACCACGTCCCACCGTGCTGGTGTTTGACTCCGGCGTCGGTGGGTTGTCGGTCTATGACGAGATCCGGCATCTCTTACCGGATCTCCATTACATTTATGCTTTCGATAACGTCGCTTTCCCGTATGGCGAAAAAAGCGAAGCGTTTATTGTTGAGCGAGTGGTGGCAATTGTCACCGCGGTGCAAGAACGTTATCCCCTTGCGCTGGCTGTGGTCGCTTGCAACACTGCCAGTACCGTTTCACTTCCTGCATTACGCGAAAAGTTCGACTTCCCGGTTGTTGGTGTCGTGCCGGCGATTAAACCTGCTGCACGTCTGACGGCAAATGGCATTGTCGGATTACTGGCAACCCGCGGAACAGTTAAACGTTCTTATACTCATGAGCTGATCGCGCGTTTCGCTAATGAATGCCAGATAGAAATGCTGGGCTCGGCAGAGATGGTTGAGTTGGCTGAAGCGAAGCTACATGGCGAAGATGTTTCTCTGGATGCACTAAAACGTATCCTACGCCCGTGGTTAAGAATGAAAGAGCCGCCAGATACCGTTGTATTGGGTTGCACCCATTTCCCTCTACTACAAGAAGAACTGTTACAAGTGCTGCCAGAGGGAACCCGGCTGGTGGATTCTGGCGCAGCGATTGCTCGCCGAACGGCCTGGTTGTTAGAACATGAAGCCCCGGATGCAAAATCTGCCGATGCGAATATTGCCTTTTGTATGGCAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGA", - "dna_sequence_length": 858, - "functions": [ - "glutamate racemase" - ], - "id": "CDS_3894", - "location": [ - [ - "NC_000913", - 4165428, - "+", - 858 - ] - ], - "md5": "4608be4221a1508de52f850f9857b32a", - "parent_gene": "", - "protein_md5": "491082b44bf46a95668a6816713fc15d", - "protein_translation": "MATKLQDGNTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKFDFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPGAEQLLPVLQRYGFETLEKLAVLG", - "protein_translation_length": 285, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yijB" - ], - [ - "gene_synonym", - "EcoGene:EG11205" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08373" - ], - [ - "gene_synonym", - "murB" - ], - [ - "gene_synonym", - "GeneID:948470" - ], - [ - "gene_synonym", - "ECK3964" - ], - [ - "gene_synonym", - "ASAP:ABE-0012999" - ], - [ - "gene_synonym", - "GI:16131806" - ], - [ - "gene_synonym", - "JW3940" - ], - [ - "gene_synonym", - "NP_418403.1" - ], - [ - "gene_synonym", - "b3972" - ] - ], - "dna_sequence": "ATGAACCACTCCTTAAAACCCTGGAACACATTTGGCATTGATCATAATGCTCAGCACATTGTATGTGCCGAAGACGAACAACAATTACTCAATGCCTGGCAGTATGCAACCGCAGAAGGACAACCCGTTCTTATTCTGGGTGAAGGAAGTAATGTACTTTTTCTGGAGGACTATCGCGGCACGGTGATCATCAACCGGATCAAAGGTATCGAAATTCATGATGAACCTGATGCGTGGTATTTACATGTAGGAGCCGGAGAAAACTGGCATCGTCTGGTAAAATACACTTTGCAGGAAGGTATGCCTGGTCTGGAAAATCTGGCATTAATTCCTGGTTGTGTCGGCTCATCACCTATCCAGAATATTGGTGCTTATGGCGTAGAATTACAGCGAGTTTGCGCTTATGTTGATTCTGTTGAACTGGCGACAGGCAAGCAAGTGCGCTTAACTGCCAAAGAGTGCCGTTTTGGCTATCGCGACAGTATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAACTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGATCCAAAAGTGAATGGCAATGCCGGTAGTTTCTTCAAAAACCCTGTTGTATCTGCCGAAACGGCTAAAGCATTACTGTCACAATTTCCAACAGCACCAAATTACCCCCAGGCGGATGGTTCAGTAAAACTGGCAGCAGGTTGGCTTATCGATCAGTGCCAGCTAAAAGGGATGCAAATAGGTGGGGCTGCGGTGCACCGTCAACAGGCGTTAGTTCTCATTAATGAAGACAATGCAAAAAGCGAAGATGTTGTACAGCTGGCGCATCATGTAAGACAGAAAGTTGGTGAAAAATTTAATGTCTGGCTTGAGCCTGAAGTCCGCTTTATTGGTGCATCAGGTGAAGTGAGCGCAGTGGAGACAATTTCATGA", 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"gene_synonym", - "ECK3965" - ], - [ - "gene_synonym", - "bioR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06709" - ], - [ - "gene_synonym", - "JW3941" - ], - [ - "gene_synonym", - "ASAP:ABE-0013001" - ], - [ - "gene_synonym", - "birA" - ], - [ - "gene_synonym", - "b3973" - ] - ], - "dna_sequence": 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- "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6I3" - ], - [ - "gene_synonym", - "rts" - ], - [ - "gene_synonym", - "ASAP:ABE-0013003" - ], - [ - "gene_synonym", - "panK" - ], - [ - "gene_synonym", - "coaA" - ], - [ - "gene_synonym", - "ts-9" - ], - [ - "gene_synonym", - "b3974" - ], - [ - "gene_synonym", - "GI:16131808" - ] - ], - "dna_sequence": 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"ATGTCTAAAGAAAAGTTTGAACGTACAAAACCGCACGTTAACGTCGGTACTATCGGCCACGTTGACCATGGTAAAACAACGCTGACCGCTGCAATCACTACCGTACTGGCTAAAACCTACGGCGGTGCTGCTCGCGCATTCGACCAGATCGATAACGCGCCGGAAGAAAAAGCTCGTGGTATCACCATCAACACTTCTCACGTTGAATACGACACCCCGACCCGTCACTACGCACACGTAGACTGCCCGGGGCACGCCGACTATGTTAAAAACATGATCACCGGTGCTGCGCAGATGGACGGCGCGATCCTGGTAGTTGCTGCGACTGACGGCCCGATGCCGCAGACTCGTGAGCACATCCTGCTGGGTCGTCAGGTAGGCGTTCCGTACATCATCGTGTTCCTGAACAAATGCGACATGGTTGATGACGAAGAGCTGCTGGAACTGGTTGAAATGGAAGTTCGTGAACTTCTGTCTCAGTACGACTTCCCGGGCGACGACACTCCGATCGTTCGTGGTTCTGCTCTGAAAGCGCTGGAAGGCGACGCAGAGTGGGAAGCGAAAATCCTGGAACTGGCTGGCTTCCTGGATTCTTACATTCCGGAACCAGAGCGTGCGATTGACAAGCCGTTCCTGCTGCCGATCGAAGACGTATTCTCCATCTCCGGTCGTGGTACCGTTGTTACCGGTCGTGTAGAACGCGGTATCATCAAAGTTGGTGAAGAAGTTGAAATCGTTGGTATCAAAGAGACTCAGAAGTCTACCTGTACTGGCGTTGAAATGTTCCGCAAACTGCTGGACGAAGGCCGTGCTGGTGAGAACGTAGGTGTTCTGCTGCGTGGTATCAAACGTGAAGAAATCGAACGTGGTCAGGTACTGGCTAAGCCGGGCACCATCAAGCCGCACACCAAGTTCGAATCTGAAGTGTACATTCTGTCCAAAGATGAAGGCGGCCGTCATACTCCGTTCTTCAAAGGCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTAATGCCGGGCGACAACATCAAAATGGTTGTTACCCTGATCCACCCGATCGCGATGGACGACGGTCTGCGTTTCGCAATCCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAA", 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"b3981" - ], - [ - "gene_synonym", - "ECK3972" - ], - [ - "gene_synonym", - "mbrC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AG96" - ], - [ - "gene_synonym", - "GI:16131811" - ], - [ - "gene_synonym", - "JW3944" - ], - [ - "gene_synonym", - "ASAP:ABE-0013023" - ], - [ - "gene_synonym", - "prlG" - ] - ], - "dna_sequence": "ATGAGTGCGAATACCGAAGCTCAAGGAAGCGGGCGCGGCCTGGAAGCGATGAAGTGGGTCGTTGTGGTGGCATTGCTCCTGGTGGCGATTGTCGGCAACTATCTTTATCGCGACATTATGCTGCCGCTGCGTGCGCTGGCCGTAGTAATTCTGATTGCTGCAGCGGGTGGTGTCGCGCTGTTAACGACAAAAGGTAAAGCTACCGTTGCTTTTGCCCGTGAAGCGCGTACCGAAGTCCGTAAGGTCATTTGGCCGACTCGCCAGGAAACATTGCACACCACGCTGATTGTGGCTGCGGTTACCGCAGTAATGTCACTGATCCTGTGGGGACTGGATGGTATTCTGGTTCGCCTGGTATCCTTTATCACTGGCCTGAGGTTCTGA", - "dna_sequence_length": 384, - "functions": [ - "preprotein translocase membrane subunit" - ], - "id": "CDS_3899", - "location": [ - [ - "NC_000913", - 4177358, - "+", - 384 - ] - ], - "md5": "75e182f703103920b9e8808918cc3d15", - "parent_gene": "", - "protein_md5": "d7fac8c3b32b51f5695354313167117d", - "protein_translation": "MSANTEAQGSGRGLEAMKWVVVVALLLVAIVGNYLYRDIMLPLRALAVVILIAAAGGVALLTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVSFITGLRF", - "protein_translation_length": 127, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3945" - ], - [ - "gene_synonym", - "nusG" - ], - [ - "gene_synonym", - "ECK3973" - ], - [ - "gene_synonym", - "EcoGene:EG10667" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFG0" - ], - [ - "gene_synonym", - "GI:16131812" - ], - [ - "gene_synonym", - "b3982" - ], - [ - "gene_synonym", - "ASAP:ABE-0013026" - ], - [ - "gene_synonym", - "NP_418409.1" - ], - [ - "gene_synonym", - "GeneID:948485" - ] - ], - "dna_sequence": "ATGTCTGAAGCTCCTAAAAAGCGCTGGTACGTCGTTCAGGCGTTTTCCGGTTTTGAAGGCCGCGTAGCAACGTCGCTGCGTGAGCATATCAAATTACACAACATGGAAGATTTGTTTGGTGAAGTCATGGTACCAACCGAAGAAGTGGTTGAAATCCGTGGCGGTCAGCGTCGCAAAAGCGAACGTAAATTCTTCCCTGGCTACGTCCTCGTTCAGATGGTGATGAACGACGCGAGCTGGCACCTGGTGCGCAGCGTACCGCGTGTGATGGGCTTCATCGGCGGTACTTCCGATCGTCCTGCGCCAATCAGCGATAAAGAAGTCGATGCGATTATGAACCGCCTGCAGCAGGTTGGTGATAAGCCGCGTCCGAAAACGCTGTTTGAACCGGGTGAAATGGTCCGTGTTAATGATGGTCCGTTCGCTGACTTCAACGGTGTTGTTGAAGAAGTGGATTACGAGAAATCTCGTCTGAAAGTGTCTGTTTCTATCTTCGGTCGTGCGACCCCGGTAGAGCTGGACTTCAGCCAGGTTGAAAAAGCCTAA", - "dna_sequence_length": 546, - "functions": [ - "transcription termination factor" - ], - "id": "CDS_3900", - "location": [ - [ - "NC_000913", - 4177743, - "+", - 546 - ] - ], - "md5": "86ac44df8e726384f9c78f11c7645df0", - "parent_gene": "", - "protein_md5": "b5d2ac662405ed8122bc520d5bb79ca1", - "protein_translation": 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"ATGGCTAAGAAAGTACAAGCCTATGTCAAGCTGCAGGTTGCAGCTGGTATGGCTAACCCGAGTCCGCCAGTAGGTCCGGCTCTGGGTCAGCAGGGCGTAAACATCATGGAATTCTGCAAAGCGTTCAACGCAAAAACTGATTCCATCGAAAAAGGTCTGCCGATTCCGGTAGTAATCACCGTTTACGCTGACCGTTCTTTCACTTTCGTTACCAAGACCCCGCCGGCAGCAGTTCTGCTGAAAAAAGCGGCTGGTATCAAGTCTGGTTCCGGTAAGCCGAACAAAGACAAAGTGGGTAAAATTTCCCGCGCTCAGCTGCAGGAAATCGCGCAGACCAAAGCTGCCGACATGACTGGTGCCGACATTGAAGCGATGACTCGCTCCATCGAAGGTACTGCACGTTCCATGGGCCTGGTAGTGGAGGACTAA", - "dna_sequence_length": 429, - "functions": [ - "50S ribosomal subunit protein L11" - ], - "id": "CDS_3901", - "location": [ - [ - "NC_000913", - 4178447, - "+", - 429 - ] - ], - "md5": "15581a6c10bff04a6539463ae60ceb3e", - "parent_gene": "", - "protein_md5": "8db149aa24ca533fb58ad37447a8e174", - "protein_translation": "MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED", - "protein_translation_length": 142, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", 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"ATGGCTAAACTGACCAAGCGCATGCGTGTTATCCGCGAGAAAGTTGATGCAACCAAACAGTACGACATCAACGAAGCTATCGCACTGCTGAAAGAGCTGGCGACTGCTAAATTCGTAGAAAGCGTGGACGTAGCTGTTAACCTCGGCATCGACGCTCGTAAATCTGACCAGAACGTACGTGGTGCAACTGTACTGCCGCACGGTACTGGCCGTTCCGTTCGCGTAGCCGTATTTACCCAAGGTGCAAACGCTGAAGCTGCTAAAGCTGCAGGCGCAGAACTGGTAGGTATGGAAGATCTGGCTGACCAGATCAAGAAAGGCGAAATGAACTTTGACGTTGTTATTGCTTCTCCGGATGCAATGCGCGTTGTTGGCCAGCTGGGCCAGGTTCTGGGTCCGCGCGGCCTGATGCCAAACCCGAAAGTGGGTACTGTAACACCGAACGTTGCTGAAGCGGTTAAAAACGCTAAAGCTGGCCAGGTTCGTTACCGTAACGACAAAAACGGCATCATCCACACCACCATCGGTAAAGTGGACTTTGACGCTGACAAACTGAAAGAAAACCTGGAAGCTCTGCTGGTTGCGCTGAAAAAAGCAAAACCGACTCAGGCGAAAGGCGTGTACATCAAGAAAGTTAGCATCTCCACCACCATGGGTGCAGGTGTTGCAGTTGACCAGGCTGGCCTGAGCGCTTCTGTAAACTAA", - "dna_sequence_length": 705, - "functions": [ - "50S ribosomal subunit protein L1" - ], - "id": "CDS_3902", - "location": [ - [ - "NC_000913", - 4178879, - "+", - 705 - ] - ], - "md5": "c545f482ac23d93858d52f14dd1375f6", - "parent_gene": "", - "protein_md5": "aa221aaeffc9e9506e602943921ef46a", - "protein_translation": "MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVDQAGLSASVN", - "protein_translation_length": 234, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG10871" - ], - [ - "gene_synonym", - "NP_418412.1" - ], - [ - "gene_synonym", - "GeneID:948490" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7J3" - ], - [ - "gene_synonym", - "ECK3976" - ], - [ - "gene_synonym", - "b3985" - ], - [ - "gene_synonym", - "GI:16131815" - ], - [ - "gene_synonym", - "rplJ" - ], - [ - "gene_synonym", - "ASAP:ABE-0013035" - ], - [ - "gene_synonym", - "JW3948" - ] - ], - "dna_sequence": "ATGGCTTTAAATCTTCAAGACAAACAAGCGATTGTTGCTGAAGTCAGCGAAGTAGCCAAAGGCGCGCTGTCTGCAGTAGTTGCGGATTCCCGTGGCGTAACTGTAGATAAAATGACTGAACTGCGTAAAGCAGGTCGCGAAGCTGGCGTATACATGCGTGTTGTTCGTAACACCCTGCTGCGCCGTGCTGTTGAAGGTACTCCGTTCGAGTGCCTGAAAGACGCGTTTGTTGGTCCGACCCTGATTGCATACTCTATGGAACACCCGGGCGCTGCTGCTCGTCTGTTCAAAGAGTTCGCGAAAGCGAATGCAAAATTTGAGGTCAAAGCCGCTGCCTTTGAAGGTGAGCTGATCCCGGCGTCTCAGATCGACCGCCTGGCAACTCTGCCGACCTACGAAGAAGCAATTGCACGCCTGATGGCAACCATGAAAGAAGCTTCGGCTGGCAAACTGGTTCGTACTCTGGCTGCTGTACGCGATGCGAAAGAAGCTGCTTAA", - "dna_sequence_length": 498, - "functions": [ - "50S ribosomal subunit protein L10" - ], - "id": "CDS_3903", - "location": [ - [ - "NC_000913", - 4179996, - "+", - 498 - ] - ], - "md5": "f76d571657762e0dd2c384f27d676fa8", - "parent_gene": "", - "protein_md5": "bb3e0d7cf8c73e995b255695bc36b470", - "protein_translation": "MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAKANAKFEVKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRDAKEAA", - "protein_translation_length": 165, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948489" - ], - [ - "gene_synonym", - "ECK3977" - ], - [ - "gene_synonym", - "GI:16131816" - ], - [ - "gene_synonym", - "b3986" - ], - [ - "gene_synonym", - "EcoGene:EG10873" - ], - [ - "gene_synonym", - "rplL" - ], - [ - "gene_synonym", - "ASAP:ABE-0013038" - ], - [ - "gene_synonym", - "NP_418413.1" - ], - [ - "gene_synonym", - "JW3949" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7K2" - ] - ], - "dna_sequence": "ATGTCTATCACTAAAGATCAAATCATTGAAGCAGTTGCAGCTATGTCTGTAATGGACGTTGTAGAACTGATCTCTGCAATGGAAGAAAAATTCGGTGTTTCCGCTGCTGCTGCTGTAGCTGTAGCTGCTGGCCCGGTTGAAGCTGCTGAAGAAAAAACTGAATTCGACGTAATTCTGAAAGCTGCTGGCGCTAACAAAGTTGCTGTTATCAAAGCAGTACGTGGCGCAACTGGCCTGGGTCTGAAAGAAGCTAAAGACCTGGTAGAATCTGCACCGGCTGCTCTGAAAGAAGGCGTGAGCAAAGACGACGCAGAAGCACTGAAAAAAGCTCTGGAAGAAGCTGGCGCTGAAGTTGAAGTTAAATAA", - "dna_sequence_length": 366, - "functions": [ - "50S ribosomal subunit protein L7/L12" - ], - "id": "CDS_3904", - "location": [ - [ - "NC_000913", - 4180560, - "+", - 366 - ] - ], - "md5": "51cced02f30a52449d87e07825bef08a", - "parent_gene": "", - "protein_md5": "951984a24105ceca351709a149fd5e19", - "protein_translation": "MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAGPVEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEVK", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948488" - ], - [ - "gene_synonym", - "mbrD?" - ], - [ - "gene_synonym", - "groN" - ], - [ - "gene_synonym", - "ECK3978" - ], - [ - "gene_synonym", - "ron" - ], - [ - "gene_synonym", - "nitB" - ], - [ - "gene_synonym", - "stl" - ], - [ - "gene_synonym", - "ASAP:ABE-0013041" - ], - [ - "gene_synonym", - "b3987" - ], - [ - "gene_synonym", - "EcoGene:EG10894" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8V2" - ], - [ - "gene_synonym", - "rpoB" - ], - [ - "gene_synonym", - "stv" - ], - [ - "gene_synonym", - "NP_418414.1" - ], - [ - "gene_synonym", - "JW3950" - ], - [ - "gene_synonym", - "ftsR" - ], - [ - "gene_synonym", - "sdgB" - ], - [ - "gene_synonym", - "rif" - ], - [ - "gene_synonym", - "GI:16131817" - ], - [ - "gene_synonym", - "tabG" - ], - [ - "gene_synonym", - "tabD" - ] - ], - "dna_sequence": "ATGGTTTACTCCTATACCGAGAAAAAACGTATTCGTAAGGATTTTGGTAAACGTCCACAAGTTCTGGATGTACCTTATCTCCTTTCTATCCAGCTTGACTCGTTTCAGAAATTTATCGAGCAAGATCCTGAAGGGCAGTATGGTCTGGAAGCTGCTTTCCGTTCCGTATTCCCGATTCAGAGCTACAGCGGTAATTCCGAGCTGCAATACGTCAGCTACCGCCTTGGCGAACCGGTGTTTGACGTCCAGGAATGTCAAATCCGTGGCGTGACCTATTCCGCACCGCTGCGCGTTAAACTGCGTCTGGTGATCTATGAGCGCGAAGCGCCGGAAGGCACCGTAAAAGACATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGACAACGGTACCTTTGTTATCAACGGTACTGAGCGTGTTATCGTTTCCCAGCTGCACCGTAGTCCGGGCGTCTTCTTTGACTCCGACAAAGGTAAAACCCACTCTTCGGGTAAAGTGCTGTATAACGCGCGTATCATCCCTTACCGTGGTTCCTGGCTGGACTTCGAATTCGATCCGAAGGACAACCTGTTCGTACGTATCGACCGTCGCCGTAAACTGCCTGCGACCATCATTCTGCGCGCCCTGAACTACACCACAGAGCAGATCCTCGACCTGTTCTTTGAAAAAGTTATCTTTGAAATCCGTGATAACAAGCTGCAGATGGAACTGGTGCCGGAACGCCTGCGTGGTGAAACCGCATCTTTTGACATCGAAGCTAACGGTAAAGTGTACGTAGAAAAAGGCCGCCGTATCACTGCGCGCCACATTCGCCAGCTGGAAAAAGACGACGTCAAACTGATCGAAGTCCCGGTTGAGTACATCGCAGGTAAAGTGGTTGCTAAAGACTATATTGATGAGTCTACCGGCGAGCTGATCTGCGCAGCGAACATGGAGCTGAGCCTGGATCTGCTGGCTAAGCTGAGCCAGTCTGGTCACAAGCGTATCGAAACGCTGTTCACCAACGATCTGGATCACGGCCCATATATCTCTGAAACCTTACGTGTCGACCCAACTAACGACCGTCTGAGCGCACTGGTAGAAATCTACCGCATGATGCGCCCTGGCGAGCCGCCGACTCGTGAAGCAGCTGAAAGCCTGTTCGAGAACCTGTTCTTCTCCGAAGACCGTTATGACTTGTCTGCGGTTGGTCGTATGAAGTTCAACCGTTCTCTGCTGCGCGAAGAAATCGAAGGTTCCGGTATCCTGAGCAAAGACGACATCATTGATGTTATGAAAAAGCTCATCGATATCCGTAACGGTAAAGGCGAAGTCGATGATATCGACCACCTCGGCAACCGTCGTATCCGTTCCGTTGGCGAAATGGCGGAAAACCAGTTCCGCGTTGGCCTGGTACGTGTAGAGCGTGCGGTGAAAGAGCGTCTGTCTCTGGGCGATCTGGATACCCTGATGCCACAGGATATGATCAACGCCAAGCCGATTTCCGCAGCAGTGAAAGAGTTCTTCGGTTCCAGCCAGCTGTCTCAGTTTATGGACCAGAACAACCCGCTGTCTGAGATTACGCACAAACGTCGTATCTCCGCACTCGGCCCAGGCGGTCTGACCCGTGAACGTGCAGGCTTCGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCAATCGAAACCCCTGAAGGTCCGAACATCGGTCTGATCAACTCTCTGTCCGTGTACGCACAGACTAACGAATACGGCTTCCTTGAGACTCCGTATCGTAAAGTGACCGACGGTGTTGTAACTGACGAAATTCACTACCTGTCTGCTATCGAAGAAGGCAACTACGTTATCGCCCAGGCGAACTCCAACTTGGATGAAGAAGGCCACTTCGTAGAAGACCTGGTAACTTGCCGTAGCAAAGGCGAATCCAGCTTGTTCAGCCGCGACCAGGTTGACTACATGGACGTATCCACCCAGCAGGTGGTATCCGTCGGTGCGTCCCTGATCCCGTTCCTGGAACACGATGACGCCAACCGTGCATTGATGGGTGCGAACATGCAACGTCAGGCCGTTCCGACTCTGCGCGCTGATAAGCCGCTGGTTGGTACTGGTATGGAACGTGCTGTTGCCGTTGACTCCGGTGTAACTGCGGTAGCTAAACGTGGTGGTGTCGTTCAGTACGTGGATGCTTCCCGTATCGTTATCAAAGTTAACGAAGACGAGATGTATCCGGGTGAAGCAGGTATCGACATCTACAACCTGACCAAATACACCCGTTCTAACCAGAACACCTGTATCAACCAGATGCCGTGTGTGTCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCACCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTGGTAAGGTAACGCCGAAAGGTGAAACTCAGCTGACCCCAGAAGAAAAACTGCTGCGTGCGATCTTCGGTGAGAAAGCCTCTGACGTTAAAGACTCTTCTCTGCGCGTACCAAACGGTGTATCCGGTACGGTTATCGACGTTCAGGTCTTTACTCGCGATGGCGTAGAAAAAGACAAACGTGCGCTGGAAATCGAAGAAATGCAGCTCAAACAGGCGAAGAAAGACCTGTCTGAAGAACTGCAGATCCTCGAAGCGGGTCTGTTCAGCCGTATCCGTGCTGTGCTGGTAGCCGGTGGCGTTGAAGCTGAGAAGCTCGACAAACTGCCGCGCGATCGCTGGCTGGAGCTGGGCCTGACAGACGAAGAGAAACAAAATCAGCTGGAACAGCTGGCTGAGCAGTATGACGAACTGAAACACGAGTTCGAGAAGAAACTCGAAGCGAAACGCCGCAAAATCACCCAGGGCGACGATCTGGCACCGGGCGTGCTGAAGATTGTTAAGGTATATCTGGCGGTTAAACGCCGTATCCAGCCTGGTGACAAGATGGCAGGTCGTCACGGTAACAAGGGTGTAATTTCTAAGATCAACCCGATCGAAGATATGCCTTACGATGAAAACGGTACGCCGGTAGACATCGTACTGAACCCGCTGGGCGTACCGTCTCGTATGAACATCGGTCAGATCCTCGAAACCCACCTGGGTATGGCTGCGAAAGGTATCGGCGACAAGATCAACGCCATGCTGAAACAGCAGCAAGAAGTCGCGAAACTGCGCGAATTCATCCAGCGTGCGTACGATCTGGGCGCTGACGTTCGTCAGAAAGTTGACCTGAGTACCTTCAGCGATGAAGAAGTTATGCGTCTGGCTGAAAACCTGCGCAAAGGTATGCCAATCGCAACGCCGGTGTTCGACGGTGCGAAAGAAGCAGAAATTAAAGAGCTGCTGAAACTTGGCGACCTGCCGACTTCCGGTCAGATCCGCCTGTACGATGGTCGCACTGGTGAACAGTTCGAGCGTCCGGTAACCGTTGGTTACATGTACATGCTGAAACTGAACCACCTGGTCGACGACAAGATGCACGCGCGTTCCACCGGTTCTTACAGCCTGGTTACTCAGCAGCCGCTGGGTGGTAAGGCACAGTTCGGTGGTCAGCGTTTCGGGGAGATGGAAGTGTGGGCGCTGGAAGCATACGGCGCAGCATACACCCTGCAGGAAATGCTCACCGTTAAGTCTGATGACGTGAACGGTCGTACCAAGATGTATAAAAACATCGTGGACGGCAACCATCAGATGGAGCCGGGCATGCCAGAATCCTTCAACGTATTGTTGAAAGAGATTCGTTCGCTGGGTATCAACATCGAACTGGAAGACGAGTAA", - "dna_sequence_length": 4029, - "functions": [ - "RNA polymerase, beta subunit" - ], - "id": "CDS_3905", - "location": [ - [ - "NC_000913", - 4181245, - "+", - 4029 - ] - ], - "md5": "07be65b41d32156e9aa0110548b73ac0", - "parent_gene": "", - "protein_md5": "5a6db54270d33f1e4bfa723559a235e2", - "protein_translation": "MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVIFEIRDNKLQMELVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDVKLIEVPVEYIAGKVVAKDYIDESTGELICAANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETLRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLREEIEGSGILSKDDIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVTDEIHYLSAIEEGNYVIAQANSNLDEEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGGVVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSEELQILEAGLFSRIRAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQRAYDLGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLKLGDLPTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMPESFNVLLKEIRSLGINIELEDE", - "protein_translation_length": 1342, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b3988" - ], - [ - "gene_synonym", - "ECK3979" - ], - [ - "gene_synonym", - "GeneID:948487" - ], - [ - "gene_synonym", - "ASAP:ABE-0013043" - ], - [ - "gene_synonym", - "EcoGene:EG10895" - ], - [ - "gene_synonym", - "rpoC" - ], - [ - "gene_synonym", - "JW3951" - ], - [ - "gene_synonym", - "NP_418415.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8T7" - ], - [ - "gene_synonym", - "tabB" - ], - [ - "gene_synonym", - "GI:16131818" - ] - ], - "dna_sequence": "GTGAAAGATTTATTAAAGTTTCTGAAAGCGCAGACTAAAACCGAAGAGTTTGATGCGATCAAAATTGCTCTGGCTTCGCCAGACATGATCCGTTCATGGTCTTTCGGTGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACGTTCAAACCAGAACGTGACGGCCTTTTCTGCGCCCGTATCTTTGGGCCGGTAAAAGATTACGAGTGCCTGTGCGGTAAGTACAAGCGCCTGAAACACCGTGGCGTCATCTGTGAGAAGTGCGGCGTTGAAGTGACCCAGACTAAAGTACGCCGTGAGCGTATGGGCCACATCGAACTGGCTTCCCCGACTGCGCACATCTGGTTCCTGAAATCGCTGCCGTCCCGTATCGGTCTGCTGCTCGATATGCCGCTGCGCGATATCGAACGCGTACTGTACTTTGAATCCTATGTGGTTATCGAAGGCGGTATGACCAACCTGGAACGTCAGCAGATCCTGACTGAAGAGCAGTATCTGGACGCGCTGGAAGAGTTCGGTGACGAATTCGACGCGAAGATGGGGGCGGAAGCAATCCAGGCTCTGCTGAAGAGCATGGATCTGGAGCAAGAGTGCGAACAGCTGCGTGAAGAGCTGAACGAAACCAACTCCGAAACCAAGCGTAAAAAGCTGACCAAGCGTATCAAACTGCTGGAAGCGTTCGTTCAGTCTGGTAACAAACCAGAGTGGATGATCCTGACCGTTCTGCCGGTACTGCCGCCAGATCTGCGTCCGCTGGTTCCGCTGGATGGTGGTCGTTTCGCGACTTCTGACCTGAACGATCTGTATCGTCGCGTCATTAACCGTAACAACCGTCTGAAACGTCTGCTGGATCTGGCTGCGCCGGACATCATCGTACGTAACGAAAAACGTATGCTGCAGGAAGCGGTAGACGCCCTGCTGGATAACGGTCGTCGCGGTCGTGCGATCACCGGTTCTAACAAGCGTCCTCTGAAATCTTTGGCCGACATGATCAAAGGTAAACAGGGTCGTTTCCGTCAGAACCTGCTCGGTAAGCGTGTTGACTACTCCGGTCGTTCTGTAATCACCGTAGGTCCATACCTGCGTCTGCATCAGTGCGGTCTGCCGAAGAAAATGGCACTGGAGCTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGTCTTGCTACCACCATTAAAGCTGCGAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTTATCCGCGAACACCCGGTACTGCTGAACCGTGCACCGACTCTGCACCGTCTGGGTATCCAGGCATTTGAACCGGTACTGATCGAAGGTAAAGCTATCCAGCTGCACCCGCTGGTTTGTGCGGCATATAACGCCGACTTCGATGGTGACCAGATGGCTGTTCACGTACCGCTGACGCTGGAAGCCCAGCTGGAAGCGCGTGCGCTGATGATGTCTACCAACAACATCCTGTCCCCGGCGAACGGCGAACCAATCATCGTTCCGTCTCAGGACGTTGTACTGGGTCTGTACTACATGACCCGTGACTGTGTTAACGCCAAAGGCGAAGGCATGGTGCTGACTGGCCCGAAAGAAGCAGAACGTCTGTATCGCTCTGGTCTGGCTTCTCTGCATGCGCGCGTTAAAGTGCGTATCACCGAGTATGAAAAAGATGCTAACGGTGAATTAGTAGCGAAAACCAGCCTGAAAGACACGACTGTTGGCCGTGCCATTCTGTGGATGATTGTACCGAAAGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTAAAAAAGCAATCTCCAAAATGCTGAACACCTGCTACCGCATTCTCGGTCTGAAACCGACCGTTATTTTTGCGGACCAGATCATGTACACCGGCTTCGCCTATGCAGCGCGTTCTGGTGCATCTGTTGGTATCGATGACATGGTCATCCCGGAGAAGAAACACGAAATCATCTCCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACCCATGAAGGTATCATGATGACTCCGGTTATCGAGGGTGGTGACGTTAAAGAGCCGCTGCGCGATCGCGTACTGGGTCGTGTAACTGCTGAAGACGTTCTGAAGCCGGGTACTGCTGATATCCTCGTTCCGCGCAACACGCTGCTGCACGAACAGTGGTGTGACCTGCTGGAAGAGAACTCTGTCGACGCGGTTAAAGTACGTTCTGTTGTATCTTGTGACACCGACTTTGGTGTATGTGCGCACTGCTACGGTCGTGACCTGGCGCGTGGCCACATCATCAACAAGGGTGAAGCAATCGGTGTTATCGCGGCACAGTCCATCGGTGAACCGGGTACACAGCTGACCATGCGTACGTTCCACATCGGTGGTGCGGCATCTCGTGCGGCTGCTGAATCCAGCATCCAAGTGAAAAACAAAGGTAGCATCAAGCTCAGCAACGTGAAGTCGGTTGTGAACTCCAGCGGTAAACTGGTTATCACTTCCCGTAATACTGAACTGAAACTGATCGACGAATTCGGTCGTACTAAAGAAAGCTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAACCGTTGCAAACTGGGACCCGCACACCATGCCGGTTATCACCGAAGTAAGCGGTTTTGTACGCTTTACTGACATGATCGACGGCCAGACCATTACGCGTCAGACCGACGAACTGACCGGTCTGTCTTCGCTGGTGGTTCTGGATTCCGCAGAACGTACCGCAGGTGGTAAAGATCTGCGTCCGGCACTGAAAATCGTTGATGCTCAGGGTAACGACGTTCTGATCCCAGGTACCGATATGCCAGCGCAGTACTTCCTGCCGGGTAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGACGGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGACTTCCTGGAAGGCGAACAGGTTGAATACTCTCGCGTCAAGATCGCAAACCGCGAACTGGAAGCGAACGGCAAAGTGGGTGCAACTTACTCCCGCGATCTGCTGGGTATCACCAAAGCGTCTCTGGCAACCGAGTCCTTCATCTCCGCGGCATCGTTCCAGGAGACCACTCGCGTGCTGACCGAAGCAGCCGTTGCGGGCAAACGCGACGAACTGCGCGGCCTGAAAGAGAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCACCGCAGGTGACTGCAGAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAA", - "dna_sequence_length": 4224, - "functions": [ - "RNA polymerase, beta prime subunit" - ], - "id": "CDS_3906", - "location": [ - [ - "NC_000913", - 4185350, - "+", - 4224 - ] - ], - "md5": "fed09cc73800e64aacfd785f67792b56", - "parent_gene": "", - "protein_md5": "a30532fe425b21bf247cfa9b90939faa", - "protein_translation": "MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERLYRSGLASLHARVKVRITEYEKDANGELVAKTSLKDTTVGRAILWMIVPKGLPYSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGQEEKQVSFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADILVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKLSNVKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGAVLAKGDGEQVAGGETVANWDPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERVERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGATYSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEAPAAPQVTAEDASASLAELLNAGLGGSDNE", 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"ATGAAACAGGAAGTGGAAAAGTGGCGACCTTTTGGACATCCGGATGGTGATATTCGTGATTTATCATTTCTTGATGCTCATCAGGCTGTCTACGTTCAGCATCATGAGGGCAAAGAGCCTTTAGAGTATCGCTTTTGGGTTACCTACTCTCTTCACTGCTTCACAAAAGATTATGAACATCAGACGAACGAAGAAAAACAATCGTTAATGTACCACGCGCCTAAAGAATCTCGTCCCTTCTGCCAGCACCGTTATAACTTAGCGCGCACACACTTAAAAAGAACTATTTTGGCGCTGCCAGAAAGCAACGTTATTCATGCCGGGTATGGTAGCTATGCCGTGATTGAGGTGGACTTAGACGGAGGAGATAAGGCATTTTACTTTGTTGCGTTCAGGGCTTTCAGGGAAAAGAAAAAACTCCGTTTGCATGTAACTAGCGCTTATCCCATTTCTGAAAAACAGAAAGGTAAATCAGTGAAATTTTTCACCATTGCCTACAACTTATTGAGAAATAAGCAGCTTCCTCAGCCCTCAAAATAA", - "dna_sequence_length": 540, - "functions": [ - "stationary phase growth adaptation protein" - ], - "id": "CDS_3907", - "location": [ - [ - "NC_000913", - 4189786, - "+", - 540 - ] - ], - "md5": "cc64ac764afa7417488d52a889fe8a27", - "parent_gene": "", - "protein_md5": "8e4067112e91e9268e4e913e45dd9981", - "protein_translation": "MKQEVEKWRPFGHPDGDIRDLSFLDAHQAVYVQHHEGKEPLEYRFWVTYSLHCFTKDYEHQTNEEKQSLMYHAPKESRPFCQHRYNLARTHLKRTILALPESNVIHAGYGSYAVIEVDLDGGDKAFYFVAFRAFREKKKLRLHVTSAYPISEKQKGKSVKFFTIAYNLLRNKQLPQPSK", - "protein_translation_length": 179, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013048" - ], - [ - "gene_synonym", - "GeneID:948494" - ], - [ - "gene_synonym", - "NP_418417.1" - ], - [ - "gene_synonym", - "ECK3981" - ], - [ - "gene_synonym", - "GI:16131820" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30140" - ], - [ - "gene_synonym", - "thiH" - ], - [ - "gene_synonym", - "b3990" - ], - [ - "gene_synonym", - "JW3953" - ], - [ - "gene_synonym", - "thiB" - ], - [ - "gene_synonym", - "EcoGene:EG11590" - ] - ], - "dna_sequence": "ATGAAAACCTTCAGCGATCGCTGGCGACAACTGGACTGGGACGACATCCGCCTGCGTATCAACGGCAAAACGGCTGCTGACGTAGAGCGGGCGCTAAATGCCTCGCAACTCACCCGCGACGACATGATGGCGCTGTTATCGCCTGCCGCCAGTGGCTATCTGGAACAACTGGCCCAACGGGCGCAGCGTCTGACCCGTCAGCGATTTGGCAACACAGTTAGTTTCTACGTCCCGCTTTATCTTTCCAATCTTTGCGCTAACGACTGCACGTACTGTGGATTTTCCATGAGTAATCGCATCAAGCGCAAAACGCTGGATGAAGCGGATATTGCCAGGGAAAGTGCCGCTATACGGGAGATGGGCTTTGAACATCTGCTGTTAGTCACTGGTGAACATCAGGCGAAAGTGGGGATGGATTACTTTCGTCGTCATCTCCCTGCCCTTCGTGAACAGTTCTCTTCACTACAGATGGAAGTGCAACCGCTGGCGGAGACGGAATACGCCGAGTTAAAGCAACTTGGTCTGGATGGCGTGATGGTTTATCAGGAGACATATCACGAGGCGACTTATGCCCGCCATCATCTGAAAGGCAAAAAACAGGACTTCTTCTGGCGGCTGGAAACGCCGGATCGGCTGGGGCGTGCGGGGATTGATAAGATAGGCCTCGGCGCGCTAATTGGCCTTTCCGACAACTGGCGCGTTGACAGCTATATGGTTGCCGAACATTTGCTATGGCTGCAACAGCATTACTGGCAAAGCCGTTACTCTGTCTCCTTTCCGCGCCTGCGCCCGTGTACTGGCGGCATTGAGCCTGCGTCGATTATGGATGAACGCCAGTTAGTGCAAACCATCTGCGCCTTCCGACTGCTTGCACCGGAGATTGAACTGTCACTCTCCACGCGGGAATCACCGTGGTTTCGCGATCGCGTTATTCCGCTGGCGATCAATAACGTCAGCGCCTTCTCGAAAACGCAGCCAGGTGGCTATGCCGATAATCACCCCGAGTTGGAACAGTTCTCACCGCACGACGATCGCAGACCGGAAGCGGTTGCTGCCGCGTTAACCGCTCAGGGTTTGCAGCCGGTATGGAAAGACTGGGACAGCTATCTGGGACGCGCCTCGCAAAGACTATGA", - "dna_sequence_length": 1134, - "functions": [ - "tyrosine lyase, involved in thiamine-thiazole moiety synthesis" - ], - "id": "CDS_3908", - "location": [ - [ - "NC_000913", - 4191868, - "-", - 1134 - ] - ], - "md5": "b99a6e5851bba16ffcce2921f33b449a", - "parent_gene": "", - "protein_md5": "40613c31eea313212fb334ca96c6996d", - "protein_translation": "MKTFSDRWRQLDWDDIRLRINGKTAADVERALNASQLTRDDMMALLSPAASGYLEQLAQRAQRLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNRIKRKTLDEADIARESAAIREMGFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQPLAETEYAELKQLGLDGVMVYQETYHEATYARHHLKGKKQDFFWRLETPDRLGRAGIDKIGLGALIGLSDNWRVDSYMVAEHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMDERQLVQTICAFRLLAPEIELSLSTRESPWFRDRVIPLAINNVSAFSKTQPGGYADNHPELEQFSPHDDRRPEAVAAALTAQGLQPVWKDWDSYLGRASQRL", - "protein_translation_length": 377, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW5549" - ], - [ - "gene_synonym", - "ECK3982" - ], - [ - "gene_synonym", - "ASAP:ABE-0013050" - ], - [ - "gene_synonym", - "NP_418418.2" - ], - [ - "gene_synonym", - "EcoGene:EG11589" - ], - [ - "gene_synonym", - "b3991" - ], - [ - "gene_synonym", - "GeneID:948493" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30139" - ], - [ - "gene_synonym", - "thiB" - ], - [ - "gene_synonym", - "GI:33347812" - ], - [ - "gene_synonym", - "thiG" - ] - ], - "dna_sequence": "ATGTTACGTATTGCGGACAAAACGTTTGATTCACATCTGTTTACCGGCACAGGGAAATTCGCTTCTTCACAACTGATGGTGGAGGCGATCCGCGCTTCCGGCAGCCAGCTGGTGACACTGGCGATGAAACGTGTCGACTTGCGCCAGCACAACGACGCTATCCTCGAACCGCTTATCGCGGCGGGTGTGACCCTGCTGCCAAATACATCCGGGGCGAAAACAGCGGAAGAAGCCATTTTCGCCGCCCATCTGGCTCGTGAAGCGTTAGGCACAAACTGGTTAAAATTAGAGATTCACCCTGACGCCCGCTGGCTGTTGCCCGATCCCATCGAAACCCTGAAAGCCGCCGAAACGCTGGTACAACAGGGATTTGTCGTGCTGCCTTACTGCGGGGCCGATCCGGTATTGTGTAAACGTCTGGAAGAAGTCGGCTGTGCAGCGGTGATGCCGCTCGGCGCGCCGATTGGCTCGAATCAGGGACTGGAAACCCGCGCCATGCTGGAGATTATTATCCAGCAGGCCACAGTGCCGGTGGTTGTCGATGCTGGCATCGGCGTTCCCAGCCATGCCGCGCAGGCGCTGGAAATGGGGGCCGACGCGGTGTTAGTGAATACGGCGATTGCCGTCGCGGACGATCCCGTCAACATGGCGAAGGCATTTCGTCTGGCGGTAGAAGCAGGCCTACTGGCACGTCAGTCCGGACCGGGCAGCCGCAGTTATTTTGCTCATGCCACCAGCCCGCTGACCGGATTTCTGGAGGCATCGGCATGA", - "dna_sequence_length": 771, - "functions": [ - "thiamine biosynthesis ThiGH complex subunit" - ], - "id": "CDS_3909", - "location": [ - [ - "NC_000913", - 4192635, - "-", - 771 - ] - ], - "md5": "631ac76d71e9ef4147bbd87caf39678f", - "parent_gene": "", - "protein_md5": "696a63d9107a6a09a9347fc1818cc273", - "protein_translation": "MLRIADKTFDSHLFTGTGKFASSQLMVEAIRASGSQLVTLAMKRVDLRQHNDAILEPLIAAGVTLLPNTSGAKTAEEAIFAAHLAREALGTNWLKLEIHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGSNQGLETRAMLEIIIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADDPVNMAKAFRLAVEAGLLARQSGPGSRSYFAHATSPLTGFLEASA", - "protein_translation_length": 256, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:2847702" - ], - [ - "gene_synonym", - "ECK3983" - ], - [ - "gene_synonym", - "thiS" - ], - [ - "gene_synonym", - "EcoGene:EG14363" - ], - [ - "gene_synonym", - "ASAP:ABE-0023907" - ], - [ - "gene_synonym", - "b4407" - ], - [ - "gene_synonym", - "JW3955" - ], - [ - "gene_synonym", - "GI:49176448" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:O32583" - ], - [ - "gene_synonym", - "YP_026279.1" - ] - ], - "dna_sequence": "ATGCAGATCCTGTTTAACGATCAAGCGATGCAGTGCGCCGCCGGGCAAACTGTTCACGAACTACTGGAGCAACTCGACCAACGACAAGCGGGCGCGGCTCTGGCGATTAATCAGCAAATCGTCCCGCGTGAGCAGTGGGCGCAACATATCGTGCAGGATGGCGACCAGATCCTGCTTTTTCAGGTTATTGCAGGGGGTTGA", - "dna_sequence_length": 201, - "functions": [ - "immediate sulfur donor in thiazole formation" - ], - "id": "CDS_3910", - "location": [ - [ - "NC_000913", - 4192837, - "-", - 201 - ] - ], - "md5": "02bb16cf39905d7aa74c5bb96e31a700", - "parent_gene": "", - "protein_md5": "3d4d07c6d0201932400ae28cc925d661", - "protein_translation": "MQILFNDQAMQCAAGQTVHELLEQLDQRQAGAALAINQQIVPREQWAQHIVQDGDQILLFQVIAGG", - "protein_translation_length": 66, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3984" - ], - [ - "gene_synonym", - "EcoGene:EG11587" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30138" - ], - [ - "gene_synonym", - "GeneID:948500" - ], - [ - "gene_synonym", - "ASAP:ABE-0013053" - ], - [ - "gene_synonym", - "GI:90111672" - ], - [ - "gene_synonym", - "JW3956" - ], - [ - "gene_synonym", - "NP_418420.4" - ], - [ - "gene_synonym", - "b3992" - ], - [ - "gene_synonym", - "thiA" - ], - [ - "gene_synonym", - "thiF" - ] - ], - "dna_sequence": "ATGAATGACCGTGACTTTATGCGTTATAGCCGCCAAATCCTGCTCGACGATATCGCTCTGGACGGGCAGCAAAAACTGCTCGACAGCCAGGTGCTGATTATCGGTCTGGGCGGGCTGGGTACACCTGCTGCGCTGTACCTGGCGGGCGCTGGCGTCGGGACGCTGGTACTGGCAGATGACGACGATGTGCATTTAAGCAATCTGCAACGACAAATCCTCTTTACCACTGAAGATATCGATCGCCCGAAATCGCAGGTCAGCCAACAGCGACTGACACAGTTGAATCCCGACATTCAACTGACAGCATTACAACAACGGTTAACGGGTGAGGCGTTAAAAGATGCGGTTGCACGGGCCGATGTGGTGCTCGACTGTACCGACAATATGGCGACTCGCCAGGAGATTAATGCCGCCTGCGTGGCACTCAACACGCCGCTTATCACCGCCAGCGCGGTCGGATTTGGCGGTCAGTTGATGGTACTGACGCCGCCCTGGGAGCAGGGGTGTTACCGCTGCCTGTGGCCAGATAACCAGGAGCCAGAACGCAACTGCCGCACGGCGGGCGTGGTTGGCCCGGTGGTCGGGGTTATGGGCACTTTGCAGGCACTGGAAGCCATTAAGTTATTAAGCGGTATAGAGACACCTGCGGGAGAACTCCGACTGTTCGACGGTAAATCGAGCCAGTGGCGCAGCCTGGCGTTGCGCCGCGCCAGTGGTTGCCCGGTATGCGGAGGAAGCAATGCAGATCCTGTTTAA", - "dna_sequence_length": 756, - "functions": [ - "adenylyltransferase, modifies ThiS C-terminus" - ], - "id": "CDS_3911", - "location": [ - [ - "NC_000913", - 4193576, - "-", - 756 - ] - ], - "md5": "2981c9d7f909e503e800ae275792e3fd", - "parent_gene": "", - "protein_md5": "671c99f93c25609cc246c5d8ff3b74af", - "protein_translation": "MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWPDNQEPERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSSQWRSLALRRASGCPVCGGSNADPV", - "protein_translation_length": 251, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11586" - ], - [ - "gene_synonym", - "ECK3985" - ], - [ - "gene_synonym", - "GeneID:948491" - ], - [ - "gene_synonym", - "GI:16131823" - ], - [ - "gene_synonym", - "ASAP:ABE-0013055" - ], - [ - "gene_synonym", - "NP_418421.1" - ], - [ - "gene_synonym", - "thiE" - ], - [ - "gene_synonym", - "b3993" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30137" - ], - [ - "gene_synonym", - "thiA" - ], - [ - "gene_synonym", - "JW3957" - ] - ], - "dna_sequence": "ATGTATCAGCCTGATTTTCCTCCTGTACCTTTTCGTTCAGGACTGTACCCGGTGGTGGACAGCGTACAGTGGATCGAACGTCTGTTGGATGCAGGCGTACGTACTCTCCAGCTACGCATCAAAGATCGGCGCGATGAAGAGGTGGAAGCCGATGTCGTGGCGGCAATTGCGCTGGGCCGCCGCTATAACGCGCGATTGTTTATCAACGATTACTGGCGGCTGGCGATCAAGCATCAGGCGTATGGCGTCCATTTGGGGCAGGAAGATTTGCAAGCCACCGATCTCAATGCCATCCGCGCGGCAGGCCTGCGGCTGGGCGTTTCGACACATGACGATATGGAAATCGACGTCGCGCTGGCAGCACGCCCCTCTTATATCGCGCTGGGACATGTGTTCCCGACGCAAACCAAACAGATGCCTTCTGCACCGCAGGGGCTGGAACAGCTGGCACGGCATGTTGAGCGACTGGCGGATTATCCCACCGTGGCGATTGGCGGTATCAGTCTGGCACGCGCGCCTGCGGTGATAGCAACGGGTGTCGGCAGTATCGCCGTCGTCAGCGCCATTACTCAAGCCGCAGACTGGCGTTTGGCAACGGCACAGTTGCTGGAAATTGCAGGAGTTGGCGATGAATGA", - "dna_sequence_length": 636, - "functions": [ - "thiamine phosphate synthase (thiamine phosphate pyrophosphorylase)" - ], - "id": "CDS_3912", - "location": [ - [ - "NC_000913", - 4194204, - "-", - 636 - ] - ], - "md5": "d4dc826835be30142e1cddf75205631b", - "parent_gene": "", - "protein_md5": "24082b5fe5a87c8b67f7cf654aa084db", - "protein_translation": "MYQPDFPPVPFRSGLYPVVDSVQWIERLLDAGVRTLQLRIKDRRDEEVEADVVAAIALGRRYNARLFINDYWRLAIKHQAYGVHLGQEDLQATDLNAIRAAGLRLGVSTHDDMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLADYPTVAIGGISLARAPAVIATGVGSIAVVSAITQAADWRLATAQLLEIAGVGDE", - "protein_translation_length": 211, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3986" - ], - [ - "gene_synonym", - "EcoGene:EG11585" - ], - [ - "gene_synonym", - "NP_418422.1" - ], - [ - "gene_synonym", - "GeneID:948492" - ], - [ - "gene_synonym", - "ASAP:ABE-0013057" - ], - [ - "gene_synonym", - "GI:16131824" - ], - [ - "gene_synonym", - "b3994" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30136" - ], - [ - "gene_synonym", - "thiC" - ], - [ - "gene_synonym", - "JW3958" - ] - ], - "dna_sequence": "ATGTCTGCAACAAAACTGACCCGCCGCGAACAACGCGCCCGGGCCCAACATTTTATCGACACCCTGGAAGGCACCGCCTTTCCCAACTCAAAACGCATTTATATCACTGGCACACACCCCGGCGTGCGCGTGCCGATGCGTGAGATCCAGCTTAGCCCGACGCTAATTGGCGGTAGCAAAGAACAGCCGCAGTACGAAGAAAACGAAGCGATTCCGGTCTACGACACCTCCGGCCCGTATGGTGATCCGCAGATTGCCATTAACGTGCAGCAAGGGCTGGCAAAACTACGCCAGCCGTGGATCGATGCGCGCGGCGATACCGAAGAACTTACCGTGCGCAGTTCCGATTACACTAAAGCGCGGCTGGCAGATGATGGCCTCGACGAACTGCGTTTTAGCGGCGTACTAACACCAAAACGCGCCAAAGCAGGACGCCGTGTCACCCAACTGCACTACGCCCGCCAGGGCATCATCACGCCGGAAATGGAATTCATCGCCATCCGCGAGAATATGGGCCGCGAGCGCATCCGTAGCGAGGTTTTACGCCACCAGCATCCGGGAATGAGCTTTGGCGCACATCTGCCGGAAAATATCACTGCGGAATTTGTCCGTGATGAAGTTGCTGCCGGACGTGCGATTATCCCGGCCAACATTAATCATCCGGAATCGGAGCCGATGATTATTGGTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGCGTAACAGCCCGGTGCCGATCGGTACAGTGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGGTTCGATTATGGCGAAATGGTGCCTCTCCCATCATCAGGAAAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGCGCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACGCTGGGCGAACTGACCAAAATTGCCTGGGAATATGACGTGCAGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACGATGAAACCCTGCCGCAAGAGTCAGGTAAAGTCGCCCATTTTTGCTCCATGTGTGGGCCGAAATTCTGCTCGATGAAAATCAGCCAGGAAGTGCGTGATTACGCCGCCACGCAAACTATTGAAATGGGAATGGCGGATATGTCGGAGAACTTCCGTGCCAGAGGCGGAGAAATCTACCTGCGTAAGGAGGAAGCGTGA", 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"type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418423.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013059" - ], - [ - "gene_synonym", - "ECK3987" - ], - [ - "gene_synonym", - "yjaE" - ], - [ - "gene_synonym", - "rsd" - ], - [ - "gene_synonym", - "GI:16131825" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFX4" - ], - [ - "gene_synonym", - "b3995" - ], - [ - "gene_synonym", - "EcoGene:EG11738" - ], - [ - "gene_synonym", - "GeneID:948496" - ], - [ - "gene_synonym", - "JW3959" - ] - ], - "dna_sequence": "ATGCTTAACCAGCTCGATAACCTGACGGAGCGCGTCAGAGGAAGTAACAAACTGGTTGATCGCTGGCTACATGTACGTAAGCATCTGCTCGTGGCTTACTACAATCTGGTTGGCATTAAGCCTGGCAAAGAATCGTACATGAGGCTAAACGAAAAAGCCCTTGATGATTTTTGTCAGAGCCTGGTCGATTACTTGTCTGCCGGACATTTCAGTATTTATGAGCGCATTCTTCATAAGCTGGAAGGCAACGGGCAACTCGCGCGCGCCGCGAAGATTTGGCCGCAACTCGAAGCCAATACTCAACAGATTATGGATTACTACGATTCCAGTCTGGAAACCGCCATCGATCATGATAATTACCTTGAGTTTCAACAGGTTTTATCTGACATCGGCGAGGCGCTGGAAGCGCGCTTTGTGCTGGAAGATAAGCTGATTCTGCTGGTGCTTGACGCCGCCCGCGTCAAACATCCTGCTTGA", - "dna_sequence_length": 477, - "functions": [ - "stationary phase protein, binds sigma 70 RNA polymerase subunit" - ], - "id": "CDS_3914", - "location": [ - [ - "NC_000913", - 4196808, - "-", - 477 - ] - ], - "md5": "43634eee7e519b7a13a3f20137db00c4", - "parent_gene": "", - "protein_md5": "008d79e35bd2270915d40e060cca3867", - "protein_translation": "MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLDAARVKHPA", - "protein_translation_length": 158, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32664" - ], - [ - "gene_synonym", - "JW5548" - ], - [ - "gene_synonym", - "yjaD" - ], - [ - "gene_synonym", - "nudC" - ], - [ - "gene_synonym", - "ECK3988" - ], - [ - "gene_synonym", - "ASAP:ABE-0013063" - ], - [ - "gene_synonym", - "GeneID:948498" - ], - [ - "gene_synonym", - "b3996" - ], - [ - "gene_synonym", - "YP_026280.1" - ], - [ - "gene_synonym", - "EcoGene:EG11702" - ], - [ - "gene_synonym", - "GI:49176450" - ] - ], - "dna_sequence": "ATGGATCGTATAATTGAAAAATTAGATCACGGCTGGTGGGTCGTCAGCCATGAACAAAAATTATGGTTGCCGAAGGGAGAATTGCCATATGGCGAAGCGGCAAATTTCGATCTTGTGGGTCAGCGCGCACTACAAATCGGCGAATGGCAGGGGGAACCTGTTTGGTTAGTACAACAGCAGCGGCGTCACGATATGGGGTCGGTACGTCAGGTCATTGATCTCGATGTTGGGCTGTTTCAACTGGCCGGACGAGGCGTACAACTGGCGGAGTTTTACCGATCGCATAAATACTGTGGTTACTGCGGGCATGAAATGTATCCGAGCAAAACCGAATGGGCGATGCTGTGCAGCCATTGCCGTGAGCGTTACTACCCGCAAATCGCCCCCTGCATTATTGTTGCCATCCGTCGCGATGATTCGATCCTCCTCGCCCAGCATACCCGCCATCGTAACGGTGTCCATACAGTACTTGCCGGATTCGTCGAAGTGGGCGAAACCCTCGAGCAGGCAGTCGCGCGGGAAGTGATGGAAGAGAGCGGAATTAAAGTTAAAAACTTGCGTTACGTGACTTCTCAGCCGTGGCCGTTTCCTCAGTCTTTAATGACCGCGTTTATGGCGGAATATGACAGCGGCGACATCGTGATCGACCCGAAAGAATTGCTCGAGGCGAACTGGTATCGCTATGACGATTTGCCGTTACTCCCGCCGCCCGGCACCGTAGCGCGCCGTCTGATAGAAGATACGGTGGCGATGTGTCGGGCAGAGTATGAGTGA", - "dna_sequence_length": 774, - "functions": [ - "NADH pyrophosphatase" - ], - "id": "CDS_3915", - "location": [ - [ - "NC_000913", - 4196903, - "+", - 774 - ] - ], - "md5": "e0443ae49ef6ea827482f630517818d7", - "parent_gene": "", - "protein_md5": "9fae77ec817b5fcd7c21904222a9dd9b", - "protein_translation": "MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRALQIGEWQGEPVWLVQQQRRHDMGSVRQVIDLDVGLFQLAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYE", - "protein_translation_length": 257, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948497" - ], - [ - "gene_synonym", - "EcoGene:EG11543" - ], - [ - "gene_synonym", - "JW3961" - ], - [ - "gene_synonym", - "hemC" - ], - [ - "gene_synonym", - "ECK3989" - ], - [ - "gene_synonym", - "GI:16131827" - ], - [ - "gene_synonym", - "hemE" - ], - [ - "gene_synonym", - "ASAP:ABE-0013066" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P29680" - ], - [ - "gene_synonym", - "b3997" - ], - [ - "gene_synonym", - "NP_418425.1" - ] - ], - "dna_sequence": "ATGACCGAACTTAAAAACGATCGTTATCTGCGGGCGCTGCTGCGCCAGCCCGTTGATGTCACTCCAGTATGGATGATGCGCCAGGCGGGTCGCTATCTACCGGAATATAAAGCCACGCGCGCCCAGGCAGGCGATTTTATGTCGCTGTGCAAAAACGCCGAGCTGGCGTGCGAAGTGACTTTGCAACCGCTGCGTCGCTACCCGCTGGATGCGGCGATCCTCTTTTCCGATATCCTCACCGTGCCGGACGCGATGGGGTTAGGGCTCTATTTTGAAGCCGGAGAAGGTCCGCGTTTTACCTCGCCAGTCACCTGCAAAGCTGACGTCGATAAACTGCCAATTCCGGACCCGGAAGATGAACTGGGTTACGTGATGAACGCGGTGCGTACCATTCGTCGCGAACTGAAAGGCGAAGTGCCGCTGATTGGTTTTTCCGGCAGCCCGTGGACGCTGGCGACCTACATGGTGGAAGGCGGCAGCAGCAAAGCCTTCACCGTGATCAAAAAAATGATGTATGCCGATCCGCAGGCGCTGCACGCTCTGCTCGATAAACTGGCGAAAAGCGTCACTTTGTATCTGAATGCGCAGATTAAAGCCGGTGCTCAGGCAGTGATGATTTTCGACACCTGGGGCGGCGTGCTTACCGGGCGCGATTATCAACAGTTCTCGCTCTATTACATGCATAAAATTGTTGATGGTTTACTGCGTGAAAACGACGGTCGCCGCGTACCGGTCACGCTGTTTACCAAAGGCGGCGGACAGTGGCTGGAAGCCATGGCAGAAACCGGTTGCGATGCGCTGGGCCTCGACTGGACAACGGACATCGCCGATGCGCGCCGCCGTGTGGGCAATAAAGTCGCGTTGCAGGGTAATATGGATCCGTCGATGCTGTACGCGCCGCCTGCCCGCATTGAAGAAGAAGTAGCGACTATACTTGCAGGTTTCGGTCACGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTGCATCGACTGTCTGAACAGTATCACCGCTAA", 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- ], - [ - "gene_synonym", - "nfi" - ], - [ - "gene_synonym", - "EcoGene:EG11915" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68739" - ], - [ - "gene_synonym", - "NP_418426.2" - ], - [ - "gene_synonym", - "b3998" - ] - ], - "dna_sequence": "ATGGATCTCGCGTCATTACGCGCTCAACAAATCGAACTGGCTTCTTCTGTGATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAGTATAAAGTTGCCCGCATCGCCACCACCATGCCTTACATTCCAGGTTTTCTTTCCTTCCGCGAATATCCTGCGCTGCTGGCAGCGTGGGAGATGCTGTCGCAAAAGCCGGATTTAGTGTTTGTCGATGGTCATGGGATCTCGCATCCTCGCCGTCTTGGCGTCGCCAGCCATTTTGGCTTATTGGTGGATGTGCCGACCATTGGCGTGGCGAAAAAACGGCTCTGCGGTAAATTCGAACCGCTCTCCAGCGAACCGGGCGCGCTGGCCCCACTGATGGATAAAGGCGAGCAGCTGGCCTGGGTCTGGCGCAGCAAAGCGCGCTGTAACCCGTTGTTTATCGCTACCGGCCATCGGGTCAGCGTGGACAGCGCGCTGGCGTGGGTACAACGCTGCATGAAAGGCTATCGTCTGCCGGAGCCAACGCGCTGGGCGGACGCGGTGGCCTCGGAACGTCCGGCGTTCGTGCGCTATACAGCAAATCAGCCCTAA", - "dna_sequence_length": 672, - "functions": [ - "endonuclease V", - "deoxyinosine 3' endonuclease" - ], - "id": "CDS_3917", - "location": [ - [ - "NC_000913", - 4198790, - "+", - 672 - ] - ], - "md5": "7449c79c10bca098c8b6524b7649965f", - "parent_gene": "", - "protein_md5": "879ad00cedf9a671b268009d65d7016e", - "protein_translation": "MDLASLRAQQIELASSVIREDRLDKDPPDLIAGADVGFEQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQKPDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKKRLCGKFEPLSSEPGALAPLMDKGEQLAWVWRSKARCNPLFIATGHRVSVDSALAWVQRCMKGYRLPEPTRWADAVASERPAFVRYTANQP", - "protein_translation_length": 223, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131829" - ], - [ - "gene_synonym", - "GeneID:948501" - ], - [ - "gene_synonym", - "NP_418427.1" - ], - [ - "gene_synonym", - "ECK3991" - ], - [ - "gene_synonym", - "JW3963" - ], - [ - "gene_synonym", - "ASAP:ABE-0013070" - ], - [ - "gene_synonym", - "EcoGene:EG11916" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32680" - ], - [ - "gene_synonym", - "b3999" - ], - [ - "gene_synonym", - "yjaG" - ] - ], - "dna_sequence": "ATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATGGCTTGCTTATGCGAACGCATGTACCCCAATTACGCCATGTTCTGCCAGCAAACCGGTTTTGGTGATGGGCAAATTTACCGTCGCATTCTCGATCTCATCTGGGAAACGCTGACCGTTAAAGACGCAAAAGTAAATTTCGACAGCCAACTGGAGAAATTTGAAGAAGCGATTCCTTCAGCCGACGATTTCGATCTGTACGGCGTTTATCCGGCAATCGATGCCTGCGTGGCGTTAAGTGAACTGGTCCATTCGCGTTTGAGTGGTGAAACGCTCGAACACGCGGTGGAAGTGAGTAAGACCTCCATCACGACCGTTGCGATGCTGGAAATGACTCAGGCTGGTCGCGAAATGAGCGATGAAGAGCTTAAAGAAAACCCAGCTGTAGAGCAAGAATGGGACATTCAGTGGGAAATATTCCGACTTTTAGCTGAGTGCGAAGAACGCGATATCGAGCTGATAAAAGGCCTTAGGGCAGACCTGCGTGAGGCGGGTGAGAGCAATATTGGTATAATTTTTCAGCAATAA", - "dna_sequence_length": 591, - "functions": [ - "DUF416 domain protein" - ], - "id": "CDS_3918", - "location": [ - [ - "NC_000913", - 4199504, - "+", - 591 - ] - ], - "md5": "195aff0fd0c04244c0aac8a72160209b", - "parent_gene": "", - "protein_md5": "9f04afa78cf67b2eff76743038ca0735", - "protein_translation": "MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGDGQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVALSELVHSRLSGETLEHAVEVSKTSITTVAMLEMTQAGREMSDEELKENPAVEQEWDIQWEIFRLLAECEERDIELIKGLRADLREAGESNIGIIFQQ", - "protein_translation_length": 196, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "hupA" - ], - [ - "gene_synonym", - "GeneID:948499" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACF0" - ], - [ - "gene_synonym", - "ECK3992" - ], - [ - "gene_synonym", - "EcoGene:EG10466" - ], - [ - "gene_synonym", - "JW3964" - ], - [ - "gene_synonym", - "GI:16131830" - ], - [ - "gene_synonym", - "b4000" - ], - [ - "gene_synonym", - "NP_418428.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013077" - ] - ], - "dna_sequence": "ATGAACAAGACTCAACTGATTGATGTAATTGCAGAGAAAGCAGAACTGTCCAAAACCCAGGCTAAAGCTGCTCTGGAGTCCACTCTGGCTGCAATTACTGAGTCTCTGAAAGAAGGCGATGCTGTACAACTGGTTGGTTTCGGTACCTTCAAAGTGAACCACCGCGCTGAGCGTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGACGCAGTTAAGTAA", - "dna_sequence_length": 273, - "functions": [ - "HU, DNA-binding transcriptional regulator, alpha subunit" - ], - "id": "CDS_3919", - "location": [ - [ - "NC_000913", - 4200281, - "+", - 273 - ] - ], - "md5": "4338e287073626f3607d5b873de7ac9b", - "parent_gene": "", - "protein_md5": "4939a1cdd4b26c7d9053b02c16db7e41", - "protein_translation": "MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVK", - "protein_translation_length": 90, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32681" - ], - [ - "gene_synonym", - "ECK3993" - ], - [ - "gene_synonym", - "GeneID:948508" - ], - [ - "gene_synonym", - "yjaH" - ], - [ - "gene_synonym", - "NP_418429.1" - ], - [ - "gene_synonym", - "JW3965" - ], - [ - "gene_synonym", - "EcoGene:EG11917" - ], - [ - "gene_synonym", - "GI:16131831" - ], - [ - "gene_synonym", - "b4001" - ], - [ - "gene_synonym", - "ASAP:ABE-0013079" - ] - ], - "dna_sequence": "GTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGATGCTGGCTGGCGCTCTGCTTCTCACTGCCTGTAGTCATAACTCTTCACTTCCTCCCTTTACCGCCAGTGGATTTGCTGAAGACCAGGGCGCGGTACGCATCTGGCGAAAAGACAGCGGCGATAATGTGCATCTGCTTGCCGTGTTTAGCCCGTGGCGCAGTGGCGATACCACGACGCGAGAGTATCGCTGGCAGGGCGATAACCTCACGCTCATCAATATCAATGTTTACAGCAAACCGCCGGTGAATATTCGCGCGCGTTTTGACGATCGCGGTGATCTGAGCTTTATGCAACGTGAATCCGATGGGGAAAAGCAGCAGCTTTCTAACGACCAAATCGATTTATACCGTTATCGTGCTGATCAGATCCGCCAGATTAGCGATGCCTTACGTCAGGGGAGAGTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGATTTAGATTCGCAGGCGATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGCGCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGA", - "dna_sequence_length": 696, - "functions": [ - "DUF1481 family putative lipoprotein" - ], - "id": "CDS_3920", - "location": [ - [ - "NC_000913", - 4200566, - "+", - 696 - ] - ], - "md5": "2961d7fa3a3bf14e41aee6c68aff12f9", - "parent_gene": "", - "protein_md5": "9096bcd0c836646ce2ec97abf38e01c2", - "protein_translation": "MNSFNEGVVSPLLSFWRRSLMLAGALLLTACSHNSSLPPFTASGFAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKPPVNIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQGRWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVANSDFCRWQPNEKTF", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "zraP" - ], - [ - "gene_synonym", - "GeneID:948507" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAA9" - ], - [ - "gene_synonym", - "yjaI" - ], - [ - "gene_synonym", - "GI:90111674" - ], - [ - "gene_synonym", - "NP_418430.2" - ], - [ - "gene_synonym", - "EcoGene:EG11918" - ], - [ - "gene_synonym", - "b4002" - ], - [ - "gene_synonym", - "ECK3994" - ], - [ - "gene_synonym", - "zra" - ], - [ - "gene_synonym", - "ASAP:ABE-0013081" - ], - [ - "gene_synonym", - "JW5546" - ] - ], - "dna_sequence": "ATGAAACGGAACACGAAAATTGCCCTGGTAATGATGGCGCTTTCAGCAATGGCGATGGGATCGACATCTGCATTTGCTCACGGCGGACACGGTATGTGGCAGCAAAATGCCGCGCCTTTGACCAGCGAACAACAGACAGCGTGGCAGAAAATCCATAATGACTTTTACGCTCAAAGCAGCGCACTGCAACAGCAACTGGTGACGAAGCGTTATGAATACAATGCCCTGTTAGCCGCGAACCCACCGGATAGCAGCAAAATTAACGCGGTCGCCAAAGAGATGGAGAATTTGCGTCAGTCGTTAGATGAGTTACGGGTGAAACGAGATATCGCGATGGCTGAAGCGGGTATTCCGCGCGGAGCCGGAATGGGCATGGGCTACGGCGGCTGCGGTGGTGGCGGTCATATGGGTATGGGCCACTGGTAA", - "dna_sequence_length": 426, - "functions": [ - "Zn-dependent periplasmic chaperone" - ], - "id": "CDS_3921", - "location": [ - [ - "NC_000913", - 4201688, - "-", - 426 - ] - ], - "md5": "930d1e4c614292499569cd4f1af51da9", - "parent_gene": "", - "protein_md5": "f98a58f47a72c930b718f4f929f7f8fa", - "protein_translation": "MKRNTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQQTAWQKIHNDFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLDELRVKRDIAMAEAGIPRGAGMGMGYGGCGGGGHMGMGHW", - "protein_translation_length": 141, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418431.1" - ], - [ - "gene_synonym", - "EcoGene:EG10008" - ], - [ - "gene_synonym", - "ECK3995" - ], - [ - "gene_synonym", - "GeneID:948506" - ], - [ - "gene_synonym", - "zraS" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P14377" - ], - [ - "gene_synonym", - "GI:16131833" - ], - [ - "gene_synonym", - "JW3967" - ], - [ - "gene_synonym", - "b4003" - ], - [ - "gene_synonym", - "ASAP:ABE-0013088" - ], - [ - "gene_synonym", - "hydH" - ] - ], - "dna_sequence": "ATGCGTTTTATGCAACGTTCTAAAGACTCCTTAGCTAAATGGTTAAGCGCGATCCTCCCCGTGGTCATTGTTGGGCTGGTGGGATTGTTTGCGGTAACTGTGATTCGTGATTATGGGCGGGCAAGCGAGGCAGACCGCCAGGCATTACTGGAAAAAGGTAATGTGCTTATCCGCGCTCTGGAGTCGGGAAGCCGCGTAGGGATGGGGATGCGAATGCACCATGTACAGCAACAGGCGCTTCTGGAAGAGATGGCGGGACAGCCGGGAGTGTTGTGGTTCGCAGTCACCGATGCGCAGGGCATCATTATTCTTCATAGCGACCCCGATAAGGTCGGGCGTGCGCTCTATTCGCCGGATGAAATGCAGAAATTAAAGCCAGAGGAAAACTCCCGCTGGCGGCTGCTTGGGAAAACGGAAACTACGCCTGCACTTGAGGTCTATCGTTTGTTCCAGCCAATGTCAGCGCCCTGGCGGCATGGAATGCACAATATGCCGCGCTGTAACGGCAAAGCTGTGCCACAAGTAGATGCACAACAGGCTATTTTTATCGCCGTTGATGCCAGTGATCTGGTTGCAACCCAGAGTGGGGAAAAGCGCAATACCCTGATTATCCTCTTCGCCCTGGCGACGGTCTTGCTGGCAAGCGTATTGTCATTCTTCTGGTATCGCCGCTATCTGCGCTCGCGCCAGCTTCTACAAGATGAAATGAAGCGCAAAGAGAAGCTGGTGGCGCTGGGGCATCTTGCGGCAGGCGTTGCCCACGAAATCCGTAACCCACTTTCCTCGATTAAAGGACTGGCGAAATACTTTGCCGAGCGCGCGCCTGCAGGGGGAGAAGCGCATCAACTGGCGCAGGTGATGGCGAAAGAGGCCGACCGTTTAAACCGCGTGGTAAGCGAGTTGCTGGAACTGGTTAAGCCAACGCATCTGGCTTTGCAGGCGGTGGATCTCAACACGCTGATTAACCACTCATTACAGCTGGTAAGTCAGGATGCAAACAGCCGGGAGATCCAGTTACGCTTTACCGCCAACGACACATTACCGGAAATTCAGGCCGACCCGGACAGGCTGACTCAGGTCCTGTTGAATCTCTATCTCAATGCTATTCAGGCGATTGGTCAGCATGGCGTGATTAGCGTGACGGCCAGCGAAAGCGGCGCGGGCGTGAAAATCAGCGTTACCGACAGCGGTAAGGGAATTGCGGCAGATCAGCTTGATGCCATCTTCACTCCGTACTTCACCACTAAAGCCGAAGGCACCGGATTGGGGCTGGCGGTCGTGCATAATATTGTTGAACAACACGGTGGTACAATTCAGGTCGCAAGCCAGGAGGGAAAAGGCTCAACGTTCACCCTCTGGCTTCCGGTCAATATTACGCGTAAGGACCCACAAGGATGA", - "dna_sequence_length": 1398, - "functions": [ - "sensory histidine kinase in two-component regulatory system with ZraR" - ], - "id": "CDS_3922", - "location": [ - [ - "NC_000913", - 4201926, - "+", - 1398 - ] - ], - "md5": "e5e4b4417e4446bb9031a510fe317c90", - "parent_gene": "", - "protein_md5": "b617dd78099efe385cdcd9a505a991d3", - "protein_translation": "MRFMQRSKDSLAKWLSAILPVVIVGLVGLFAVTVIRDYGRASEADRQALLEKGNVLIRALESGSRVGMGMRMHHVQQQALLEEMAGQPGVLWFAVTDAQGIIILHSDPDKVGRALYSPDEMQKLKPEENSRWRLLGKTETTPALEVYRLFQPMSAPWRHGMHNMPRCNGKAVPQVDAQQAIFIAVDASDLVATQSGEKRNTLIILFALATVLLASVLSFFWYRRYLRSRQLLQDEMKRKEKLVALGHLAAGVAHEIRNPLSSIKGLAKYFAERAPAGGEAHQLAQVMAKEADRLNRVVSELLELVKPTHLALQAVDLNTLINHSLQLVSQDANSREIQLRFTANDTLPEIQADPDRLTQVLLNLYLNAIQAIGQHGVISVTASESGAGVKISVTDSGKGIAADQLDAIFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGSTFTLWLPVNITRKDPQG", - "protein_translation_length": 465, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3996" - ], - [ - "gene_synonym", - "GeneID:948505" - ], - [ - "gene_synonym", - "EcoGene:EG10482" - ], - [ - "gene_synonym", - "JW3968" - ], - [ - "gene_synonym", - "zraR" - ], - [ - "gene_synonym", - "GI:16131834" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P14375" - ], - [ - "gene_synonym", - "hydG" - ], - [ - "gene_synonym", - "b4004" - ], - [ - "gene_synonym", - "ASAP:ABE-0013093" - ], - [ - "gene_synonym", - "NP_418432.1" - ] - ], - "dna_sequence": "ATGACGCACGATAATATCGATATTCTGGTGGTGGATGATGACATTAGCCACTGCACTATTTTGCAGGCTTTACTGCGCGGCTGGGGCTATAACGTCGCGCTGGCGAACAGCGGGCGACAGGCGTTGGAGCAGGTGCGGGAACAGGTTTTTGATCTTGTGCTTTGCGATGTGCGAATGGCGGAGATGGACGGCATCGCCACGCTGAAAGAGATCAAAGCGTTAAACCCGGCAATTCCGGTGCTGATTATGACTGCGTACTCCAGCGTCGAGACGGCGGTAGAGGCACTGAAAACTGGGGCGCTGGATTATCTCATCAAGCCGCTGGATTTCGATAACCTACAGGCGACGCTGGAAAAAGCGCTCGCGCATACGCACAGTATTGATGCTGAAACACCTGCGGTGACTGCCAGCCAGTTCGGTATGGTCGGTAAAAGCCCGGCGATGCAACACCTGCTCAGTGAAATCGCCCTCGTCGCGCCATCGGAAGCCACGGTACTGATCCACGGCGATTCCGGCACCGGTAAAGAGCTGGTCGCCAGGGCGATTCACGCCAGTAGCGCACGTAGCGAAAAACCGCTGGTAACGCTCAACTGTGCGGCACTCAACGAATCCTTGCTGGAATCTGAATTGTTCGGTCACGAAAAAGGGGCGTTTACTGGAGCCGATAAACGCCGGGAAGGGCGCTTTGTTGAGGCGGACGGCGGCACGCTGTTTCTCGATGAAATTGGCGATATCTCGCCGATGATGCAGGTGCGTCTGCTGCGTGCGATTCAGGAGCGCGAAGTTCAGCGTGTCGGTAGCAACCAGATTATCTCGGTTGATGTCCGGCTGATTGCGGCGACCCATCGCGATCTTGCCGCAGAGGTGAATGCCGGGCGTTTTCGCCAGGATCTCTACTATCGCCTGAATGTGGTGGCGATTGAAGTACCATCGCTGCGGCAACGGCGGGAAGATATCCCTCTGCTGGCTGGCCATTTTCTGCAGCGCTTTGCCGAGCGTAATCGCAAGGCGGTAAAAGGTTTTACGCCCCAGGCGATGGATCTGTTGATTCATTACGACTGGCCGGGAAATATTCGTGAGCTGGAAAACGCGGTGGAACGGGCAGTGGTGCTGCTGACCGGGGAATATATTTCCGAACGCGAGCTGCCGCTGGCGATTGCCAGTACGCCGATCCCGCTGGGACAAAGTCAGGATATTCAGCCGTTGGTGGAAGTGGAAAAAGAGGTGATTCTGGCGGCGCTGGAGAAAACGGGCGGCAACAAAACCGAAGCCGCCCGTCAGTTAGGGATCACGCGCAAAACGCTATTGGCAAAACTGTCGCGTTAG", - "dna_sequence_length": 1326, - "functions": [ - "fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein" - ], - "id": "CDS_3923", - "location": [ - [ - "NC_000913", - 4203320, - "+", - 1326 - ] - ], - "md5": "27fdbadbd34cf45550a2f0acca057d87", - "parent_gene": "", - "protein_md5": "30bd5c963105de755b89ed32247b10cd", - "protein_translation": "MTHDNIDILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIATLKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDAETPAVTASQFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHASSARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPMMQVRLLRAIQEREVQRVGSNQIISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAIEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVERAVVLLTGEYISERELPLAIASTPIPLGQSQDIQPLVEVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR", - "protein_translation_length": 441, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK3997" - ], - [ - "gene_synonym", - "JW3969" - ], - [ - "gene_synonym", - "GeneID:948504" - ], - [ - "gene_synonym", - "GI:16131835" - ], - [ - "gene_synonym", - "EcoGene:EG10792" - ], - [ - "gene_synonym", - "adth" - ], - [ - "gene_synonym", - "NP_418433.1" - ], - [ - "gene_synonym", - "b4005" - ], - [ - "gene_synonym", - "purD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15640" - ], - [ - "gene_synonym", - "ASAP:ABE-0013095" - ] - ], - "dna_sequence": "ATGAAAGTATTAGTGATTGGTAACGGCGGGCGCGAGCACGCGCTGGCCTGGAAAGCGGCCCAGTCGCCGCTGGTTGAGACTGTTTTTGTTGCTCCGGGTAATGCAGGCACTGCACTGGAACCCGCGCTGCAAAACGTTGCTATTGGCGTGACCGATATCCCGGCGCTGTTGGATTTCGCACAAAACGAAAAGATTGATCTGACCATCGTCGGCCCGGAAGCGCCGCTGGTGAAAGGCGTGGTCGATACCTTCCGCGCCGCCGGGCTGAAAATCTTCGGCCCAACCGCAGGTGCGGCCCAACTGGAAGGCTCAAAAGCGTTTACCAAAGATTTCCTGGCCCGCCATAAGATCCCTACGGCGGAATACCAGAACTTCACCGAGGTAGAACCTGCGCTGGCGTATCTGCGTGAGAAAGGCGCGCCAATCGTCATTAAAGCGGACGGTCTGGCTGCCGGGAAAGGCGTTATCGTGGCGATGACGCTGGAAGAAGCGGAAGCGGCTGTTCACGATATGCTGGCGGGCAACGCTTTTGGCGACGCGGGTCATCGCATCGTTATCGAAGAGTTCCTCGATGGCGAAGAAGCGAGCTTTATCGTGATGGTGGACGGCGAGCATGTGCTGCCGATGGCTACCAGCCAGGATCACAAACGCGTAGGCGATAAAGATACCGGACCAAACACCGGCGGGATGGGCGCTTACTCCCCCGCGCCGGTAGTAACCGATGACGTTCATCAGCGCACCATGGAACGTATTATCTGGCCAACCGTGAAAGGCATGGCGGCGGAAGGCAACACCTACACCGGTTTTCTCTACGCGGGCCTGATGATCGACAAACAGGGCAATCCGAAGGTTATTGAATTTAACTGCCGCTTTGGCGATCCGGAAACCCAGCCGATTATGCTGCGCATGAAGTCCGATCTGGTTGAGCTCTGCCTGGCGGCCTGTGAAAGCAAACTGGACGAGAAAACGTCCGAGTGGGATGAACGCGCTTCTCTCGGCGTGGTGATGGCTGCGGGTGGATATCCGGGTGATTACCGCACCGGTGACGTGATCCACGGCCTGCCGCTGGAAGAAGTGGCAGGCGGCAAAGTGTTCCACGCGGGCACAAAACTGGCGGATGACGAGCAGGTAGTGACCAACGGCGGGCGCGTACTGTGCGTCACCGCGCTGGGTCATACCGTGGCAGAAGCGCAGAAACGCGCCTATGCCTTAATGACCGATATCCACTGGGACGACTGCTTCTGCCGGAAAGATATCGGCTGGCGCGCTATCGAACGCGAGCAGAACTAA", - "dna_sequence_length": 1290, - "functions": [ - "phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase" - ], - "id": "CDS_3924", - "location": [ - [ - "NC_000913", - 4205931, - "-", - 1290 - ] - ], - "md5": "bb265a931d24e1a0924b15c01edc96ae", - "parent_gene": "", - "protein_md5": "9fb7f91c80c2a57277a226f2fc597147", - "protein_translation": "MKVLVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPALQNVAIGVTDIPALLDFAQNEKIDLTIVGPEAPLVKGVVDTFRAAGLKIFGPTAGAAQLEGSKAFTKDFLARHKIPTAEYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVIVAMTLEEAEAAVHDMLAGNAFGDAGHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRVGDKDTGPNTGGMGAYSPAPVVTDDVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMIDKQGNPKVIEFNCRFGDPETQPIMLRMKSDLVELCLAACESKLDEKTSEWDERASLGVVMAAGGYPGDYRTGDVIHGLPLEEVAGGKVFHAGTKLADDEQVVTNGGRVLCVTALGHTVAEAQKRAYALMTDIHWDDCFCRKDIGWRAIEREQN", - "protein_translation_length": 429, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15639" - ], - [ - "gene_synonym", - "GeneID:948503" - ], - [ - "gene_synonym", - "GI:16131836" - ], - [ - "gene_synonym", - "NP_418434.1" - ], - [ - "gene_synonym", - "JW3970" - ], - [ - "gene_synonym", - "ECK3998" - ], - [ - "gene_synonym", - "b4006" - ], - [ - "gene_synonym", - "EcoGene:EG10795" - ], - [ - "gene_synonym", - "ASAP:ABE-0013097" - ], - [ - "gene_synonym", - "purH" - ] - ], - "dna_sequence": "ATGCAACAACGTCGTCCAGTCCGCCGCGCTCTGCTCAGTGTTTCTGACAAAGCCGGTATCGTCGAATTCGCCCAGGCACTTTCCGCACGCGGTGTGGAGCTGCTGTCTACAGGGGGCACTGCCCGTCTGTTAGCAGAAAAAGGTCTGCCGGTAACCGAAGTTTCCGATTACACCGGTTTCCCGGAGATGATGGATGGACGCGTGAAGACCCTGCATCCGAAAGTACATGGTGGCATTCTGGGCCGTCGCGGCCAGGACGATGCCATTATGGAAGAACATCAGATCCAGCCTATCGATATGGTGGTTGTTAACCTGTATCCGTTCGCCCAGACCGTGGCCCGTGAAGGTTGCTCGCTGGAAGATGCGGTTGAGAACATCGATATCGGCGGCCCAACGATGGTGCGCTCCGCCGCCAAGAACCATAAAGATGTCGCAATCGTGGTGAAGAGCAGCGACTATGACGCCATTATTAAAGAGATGGATGACAACGAAGGATCGCTGACGCTTGCAACCCGTTTCGACCTCGCCATCAAAGCCTTCGAACACACTGCCGCCTACGACAGCATGATTGCCAACTACTTCGGCAGCATGGTTCCGGCTTACCACGGTGAAAGCAAAGAAGCCGCCGGTCGCTTCCCACGCACGCTGAACCTGAACTTCATTAAGAAGCTGGATATGCGTTACGGCGAGAACAGCCACCAGCAGGCTGCCTTCTATATAGAAGAGAATGTGAAAGAAGCCTCCGTTGCTACCGCAACCCAGGTTCAGGGTAAAGCCCTCTCTTATAACAACATCGCCGATACCGATGCGGCGCTGGAGTGCGTGAAAGAGTTCGCCGAGCCGGCATGTGTGATTGTGAAGCACGCCAACCCTTGCGGCGTGGCTATCGGCAATTCCATTCTTGATGCTTACGATCGCGCGTACAAAACCGACCCAACCTCCGCATTCGGCGGCATCATTGCCTTTAACCGCGAGCTGGATGCGGAAACCGCACAGGCCATCATTTCTCGTCAGTTTGTCGAAGTGATTATTGCGCCGTCCGCCAGCGAAGAAGCCCTGAAAATCACCGCCGCCAAACAGAACGTACGCGTTCTGACCTGCGGTCAGTGGGGCGAGCGTGTTCCGGGCCTCGATTTCAAACGCGTGAACGGCGGTCTGCTGGTTCAGGATCGTGACCTGGGGATGGTCGGTGCGGAAGAACTGCGCGTGGTGACCAAACGTCAGCCGAGCGAACAGGAACTGCGTGATGCGCTGTTCTGCTGGAAGGTGGCGAAGTTTGTGAAATCCAACGCTATCGTCTATGCCAAAAACAATATGACTATCGGCATTGGCGCGGGCCAGATGAGCCGCGTGTACTCCGCAAAAATCGCCGGTATTAAAGCGGCCGATGAAGGCCTGGAAGTGAAAGGTTCCTCGATGGCTTCTGACGCGTTCTTCCCGTTCCGCGACGGTATTGATGCCGCCGCCGCTGCGGGCGTGACCTGCGTAATCCAGCCTGGCGGTTCTATCCGTGATGACGAAGTGATTGCCGCCGCCGACGAGCACGGTATTGCGATGCTCTTCACCGACATGCGCCACTTCCGCCATTAA", - "dna_sequence_length": 1590, - "functions": [ - "IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase" - ], - "id": "CDS_3925", - "location": [ - [ - "NC_000913", - 4207532, - "-", - 1590 - ] - ], - "md5": "e065eebc59834cce83b49151404238b8", - "parent_gene": "", - "protein_md5": "93ad988d60fa22a774eb6f08673a912f", - "protein_translation": "MQQRRPVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLLAEKGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDAIMEEHQIQPIDMVVVNLYPFAQTVAREGCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIIKEMDDNEGSLTLATRFDLAIKAFEHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNLNFIKKLDMRYGENSHQQAAFYIEENVKEASVATATQVQGKALSYNNIADTDAALECVKEFAEPACVIVKHANPCGVAIGNSILDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAIISRQFVEVIIAPSASEEALKITAAKQNVRVLTCGQWGERVPGLDFKRVNGGLLVQDRDLGMVGAEELRVVTKRQPSEQELRDALFCWKVAKFVKSNAIVYAKNNMTIGIGAGQMSRVYSAKIAGIKAADEGLEVKGSSMASDAFFPFRDGIDAAAAAGVTCVIQPGGSIRDDEVIAAADEHGIAMLFTDMRHFRH", - "protein_translation_length": 529, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjaA" - ], - [ - "gene_synonym", - "EcoGene:EG11206" - ], - [ - "gene_synonym", - "GI:16131837" - ], - [ - "gene_synonym", - "JW3971" - ], - [ - "gene_synonym", - "NP_418435.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09162" - ], - [ - "gene_synonym", - "ECK4003" - ], - [ - "gene_synonym", - "ASAP:ABE-0013112" - ], - [ - "gene_synonym", - "GeneID:948515" - ], - [ - "gene_synonym", - "b4011" - ] - ], - "dna_sequence": "ATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGTTAATCGCCAATTTCTTTGTTGCAGAAAAAGTTCTGCAAGATCTTGTTCTGCAACTCCACCCACGTTCAACCTGGCATTCTTTTTTGCCAGCAAAACGTATGGATATTGTTGTGAGCGCACTGGAAATGAATGAGGGCGGTTTGTCACAGGTTGAGGAACGCATTCTCCATGAAGTGGTCGCTGGGGCAACGTTAATGAAATATCGCCAGTTCCACATCCATGCGCAATCAGCGGTACTCAGTGATAGTGCGGTCATGGCAATGCTTAAGCAGAAATAA", - "dna_sequence_length": 384, - "functions": [ - "stress-induced protein" - ], - "id": "CDS_3926", - "location": [ - [ - "NC_000913", - 4213234, - "+", - 384 - ] - ], - "md5": "2e7d5eea36893817fb1e02b0ca37ca8c", - "parent_gene": "", - "protein_md5": "98f07b15e6e041c2a3df84a71c2893f7", - "protein_translation": "MSVLYIQIRRNQITVRDLESKREVSGDAAFSNQRLLIANFFVAEKVLQDLVLQLHPRSTWHSFLPAKRMDIVVSALEMNEGGLSQVEERILHEVVAGATLMKYRQFHIHAQSAVLSDSAVMAMLKQK", - "protein_translation_length": 127, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjaB" - ], - [ - "gene_synonym", - "GeneID:948514" - ], - [ - "gene_synonym", - "EcoGene:EG11207" - ], - [ - "gene_synonym", - "GI:16131838" - ], - [ - "gene_synonym", - "JW3972" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P09163" - ], - [ - "gene_synonym", - "ECK4004" - ], - [ - "gene_synonym", - "ASAP:ABE-0013114" - ], - [ - "gene_synonym", - "NP_418436.1" - ], - [ - "gene_synonym", - "b4012" - ] - ], - "dna_sequence": "ATGGTTATTAGTATTCGCCGCTCACGGCATGAGGAAGGGGAGGAACTCGTTGCGATTTGGTGTCGTTCTGTCGATGCCACTCACGATTTTCTATCAGCAGAGTATCGGACCGAGCTGGAGGACCTAGTTCGTTCCTTCCTGCCGGAAGCGCCGTTGTGGGTCGCGGTTAATGAGCGGGATCAGCCGGTTGGATTTATGTTGCTAAGTGGGCAGCATATGGATGCGCTGTTTATCGATCCTGATGTGCGCGGCTGCGGCGTAGGTCGGGTGCTGGTGGAGCATGCGCTCTCGATGGCACCGGAACTGACAACCAACGTTAATGAGCAAAATGAGCAGGCGGTTGGGTTCTATAAGAAGGTGGGTTTTAAGGTTACGGGACGCTCTGAGGTGGACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGCGTAG", - "dna_sequence_length": 444, - "functions": [ - "GNAT-family putative N-acetyltransferase", - "acetyl coenzyme A-binding protein" - ], - "id": "CDS_3927", - "location": [ - [ - "NC_000913", - 4214123, - "-", - 444 - ] - ], - "md5": "4a23fb435dc80674cf6e00bae46e3091", - "parent_gene": "", - "protein_md5": "e82b1aa1f92f0bd46703b0ee99655019", - "protein_translation": "MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRTELEDLVRSFLPEAPLWVAVNERDQPVGFMLLSGQHMDALFIDPDVRGCGVGRVLVEHALSMAPELTTNVNEQNEQAVGFYKKVGFKVTGRSEVDDLGKPYPLLNLAYVGA", - "protein_translation_length": 147, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948513" - ], - [ - "gene_synonym", - "GI:16131839" - ], - [ - "gene_synonym", - "JW3973" - ], - [ - "gene_synonym", - "ECK4005" - ], - [ - "gene_synonym", - "metA" - ], - [ - "gene_synonym", - "ASAP:ABE-0013121" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07623" - ], - [ - "gene_synonym", - "EcoGene:EG10581" - ], - [ - "gene_synonym", - "NP_418437.1" - ], - [ - "gene_synonym", - "b4013" - ] - ], - "dna_sequence": "ATGCCGATTCGTGTGCCGGACGAGCTACCCGCCGTCAATTTCTTGCGTGAAGAAAACGTCTTTGTGATGACAACTTCTCGTGCGTCTGGTCAGGAAATTCGTCCACTTAAGGTTCTGATCCTTAACCTGATGCCGAAGAAGATTGAAACTGAAAATCAGTTTCTGCGCCTGCTTTCAAACTCACCTTTGCAGGTCGATATTCAGCTGTTGCGCATCGATTCCCGTGAATCGCGCAACACGCCCGCAGAGCATCTGAACAACTTCTACTGTAACTTTGAAGATATTCAGGATCAGAACTTTGACGGTTTGATTGTAACTGGTGCGCCGCTGGGCCTGGTGGAGTTTAATGATGTCGCTTACTGGCCGCAGATCAAACAGGTGCTGGAGTGGTCGAAAGATCACGTCACCTCGACGCTGTTTGTCTGCTGGGCGGTACAGGCCGCGCTCAATATCCTCTACGGCATTCCTAAGCAAACTCGCACCGAAAAACTCTCTGGCGTTTACGAGCATCATATTCTCCATCCTCATGCGCTTCTGACGCGTGGCTTTGATGATTCATTCCTGGCACCGCATTCGCGCTATGCTGACTTTCCGGCAGCGTTGATTCGTGATTACACCGATCTGGAAATTCTGGCAGAGACGGAAGAAGGGGATGCATATCTGTTTGCCAGTAAAGATAAGCGCATTGCCTTTGTGACGGGCCATCCCGAATATGATGCGCAAACGCTGGCGCAGGAATTTTTCCGCGATGTGGAAGCCGGACTAGACCCGGATGTACCGTATAACTATTTCCCGCACAATGATCCGCAAAATACACCGCGAGCGAGCTGGCGTAGTCACGGTAATTTACTGTTTACCAACTGGCTCAACTATTACGTCTACCAGATCACGCCATACGATCTACGGCACATGAATCCAACGCTGGATTAA", - "dna_sequence_length": 930, - "functions": [ - "homoserine O-transsuccinylase" - ], - "id": "CDS_3928", - "location": [ - [ - "NC_000913", - 4214280, - "+", - 930 - ] - ], - "md5": "8a5b049d22b362cfacfa25fc27cfce48", - "parent_gene": "", - "protein_md5": "3d96cb1101bbc5af060f8eea8e42733a", - "protein_translation": "MPIRVPDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLMPKKIETENQFLRLLSNSPLQVDIQLLRIDSRESRNTPAEHLNNFYCNFEDIQDQNFDGLIVTGAPLGLVEFNDVAYWPQIKQVLEWSKDHVTSTLFVCWAVQAALNILYGIPKQTRTEKLSGVYEHHILHPHALLTRGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGDAYLFASKDKRIAFVTGHPEYDAQTLAQEFFRDVEAGLDPDVPYNYFPHNDPQNTPRASWRSHGNLLFTNWLNYYVYQITPYDLRHMNPTLD", - "protein_translation_length": 309, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948512" - ], - [ - "gene_synonym", - "mas" - ], - [ - "gene_synonym", - "EcoGene:EG10023" - ], - [ - "gene_synonym", - "aceB" - ], - [ - "gene_synonym", - "ASAP:ABE-0013125" - ], - [ - "gene_synonym", - "JW3974" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08997" - ], - [ - "gene_synonym", - "ECK4006" - ], - [ - "gene_synonym", - "NP_418438.1" - ], - [ - "gene_synonym", - "b4014" - ], - [ - "gene_synonym", - "GI:16131840" - ] - ], - "dna_sequence": "ATGACTGAACAGGCAACAACAACCGATGAACTGGCTTTCACAAGGCCGTATGGCGAGCAGGAGAAGCAAATTCTTACTGCCGAAGCGGTAGAATTTCTGACTGAGCTGGTGACGCATTTTACGCCACAACGCAATAAACTTCTGGCAGCGCGCATTCAGCAGCAGCAAGATATTGATAACGGAACGTTGCCTGATTTTATTTCGGAAACAGCTTCCATTCGCGATGCTGATTGGAAAATTCGCGGGATTCCTGCGGACTTAGAAGACCGCCGCGTAGAGATAACTGGCCCGGTAGAGCGCAAGATGGTGATCAACGCGCTCAACGCCAATGTGAAAGTCTTTATGGCCGATTTCGAAGATTCACTGGCACCAGACTGGAACAAAGTGATCGACGGGCAAATTAACCTGCGTGATGCGGTTAACGGCACCATCAGTTACACCAATGAAGCAGGCAAAATTTACCAGCTCAAGCCCAATCCAGCGGTTTTGATTTGTCGGGTACGCGGTCTGCACTTGCCGGAAAAACATGTCACCTGGCGTGGTGAGGCAATCCCCGGCAGCCTGTTTGATTTTGCGCTCTATTTCTTCCACAACTATCAGGCACTGTTGGCAAAGGGCAGTGGTCCCTATTTCTATCTGCCGAAAACCCAGTCCTGGCAGGAAGCGGCCTGGTGGAGCGAAGTCTTCAGCTATGCAGAAGATCGCTTTAATCTGCCGCGCGGCACCATCAAGGCGACGTTGCTGATTGAAACGCTGCCCGCCGTGTTCCAGATGGATGAAATCCTTCACGCGCTGCGTGACCATATTGTTGGTCTGAACTGCGGTCGTTGGGATTACATCTTCAGCTATATCAAAACGTTGAAAAACTATCCCGATCGCGTCCTGCCAGACAGACAGGCAGTGACGATGGATAAACCATTCCTGAATGCTTACTCACGCCTGTTGATTAAAACCTGCCATAAACGCGGTGCTTTTGCGATGGGCGGCATGGCGGCGTTTATTCCGAGCAAAGATGAAGAGCACAATAACCAGGTGCTCAACAAAGTAAAAGCGGATAAATCGCTGGAAGCCAATAACGGTCACGATGGCACATGGATCGCTCACCCAGGCCTTGCGGACACGGCAATGGCGGTATTCAACGACATTCTCGGCTCCCGTAAAAATCAGCTTGAAGTGATGCGCGAACAAGACGCGCCGATTACTGCCGATCAGCTGCTGGCACCTTGTGATGGTGAACGCACCGAAGAAGGTATGCGCGCCAACATTCGCGTGGCTGTGCAGTACATCGAAGCGTGGATCTCTGGCAACGGCTGTGTGCCGATTTATGGCCTGATGGAAGATGCGGCGACGGCTGAAATTTCCCGTACCTCGATCTGGCAGTGGATCCATCATCAAAAAACGTTGAGCAATGGCAAACCGGTGACCAAAGCCTTGTTCCGCCAGATGCTGGGCGAAGAGATGAAAGTCATTGCCAGCGAACTGGGCGAAGAACGTTTCTCCCAGGGGCGTTTTGACGATGCCGCACGCTTGATGGAACAGATCACCACTTCCGATGAGTTAATTGATTTCCTGACCCTGCCAGGCTACCGCCTGTTAGCGTAA", - "dna_sequence_length": 1602, - "functions": [ - "malate synthase A" - ], - "id": "CDS_3929", - "location": [ - [ - "NC_000913", - 4215478, - "+", - 1602 - ] - ], - "md5": "04a719eceba5aaa7f0d6b92b8ec679f0", - "parent_gene": "", - "protein_md5": "8b9be9c80db3d271bd73dd7b1e08fe27", - "protein_translation": "MTEQATTTDELAFTRPYGEQEKQILTAEAVEFLTELVTHFTPQRNKLLAARIQQQQDIDNGTLPDFISETASIRDADWKIRGIPADLEDRRVEITGPVERKMVINALNANVKVFMADFEDSLAPDWNKVIDGQINLRDAVNGTISYTNEAGKIYQLKPNPAVLICRVRGLHLPEKHVTWRGEAIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFIPSKDEEHNNQVLNKVKADKSLEANNGHDGTWIAHPGLADTAMAVFNDILGSRKNQLEVMREQDAPITADQLLAPCDGERTEEGMRANIRVAVQYIEAWISGNGCVPIYGLMEDAATAEISRTSIWQWIHHQKTLSNGKPVTKALFRQMLGEEMKVIASELGEERFSQGRFDDAARLMEQITTSDELIDFLTLPGYRLLA", - "protein_translation_length": 533, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948517" - ], - [ - "gene_synonym", - "icl" - ], - [ - "gene_synonym", - "NP_418439.1" - ], - [ - "gene_synonym", - "aceA" - ], - [ - "gene_synonym", - "JW3975" - ], - [ - "gene_synonym", - "EcoGene:EG10022" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9G6" - ], - [ - "gene_synonym", - "ECK4007" - ], - [ - "gene_synonym", - "b4015" - ], - [ - "gene_synonym", - "GI:16131841" - ], - [ - "gene_synonym", - "ASAP:ABE-0013128" - ] - ], - "dna_sequence": "ATGAAAACCCGTACACAACAAATTGAAGAATTACAGAAAGAGTGGACTCAACCGCGTTGGGAAGGCATTACTCGCCCATACAGTGCGGAAGATGTGGTGAAATTACGCGGTTCAGTCAATCCTGAATGCACGCTGGCGCAACTGGGCGCAGCGAAAATGTGGCGTCTGCTGCACGGTGAGTCGAAAAAAGGCTACATCAACAGCCTCGGCGCACTGACTGGCGGTCAGGCGCTGCAACAGGCGAAAGCGGGTATTGAAGCAGTCTATCTGTCGGGATGGCAGGTAGCGGCGGACGCTAACCTGGCGGCCAGCATGTATCCGGATCAGTCGCTCTATCCGGCAAACTCGGTGCCAGCTGTGGTGGAGCGGATCAACAACACCTTCCGTCGTGCCGATCAGATCCAATGGTCCGCGGGCATTGAGCCGGGCGATCCGCGCTATGTCGATTACTTCCTGCCGATCGTTGCCGATGCGGAAGCCGGTTTTGGCGGTGTCCTGAATGCCTTTGAACTGATGAAAGCGATGATTGAAGCCGGTGCAGCGGCAGTTCACTTCGAAGATCAGCTGGCGTCAGTGAAGAAATGCGGTCACATGGGCGGCAAAGTTTTAGTGCCAACTCAGGAAGCTATTCAGAAACTGGTCGCGGCGCGTCTGGCAGCTGACGTGACGGGCGTTCCAACCCTGCTGGTTGCCCGTACCGATGCTGATGCGGCGGATCTGATCACCTCCGATTGCGACCCGTATGACAGCGAATTTATTACCGGCGAGCGTACCAGTGAAGGCTTCTTCCGTACTCATGCGGGCATTGAGCAAGCGATCAGCCGTGGCCTGGCGTATGCGCCATATGCTGACCTGGTCTGGTGTGAAACCTCCACGCCGGATCTGGAACTGGCGCGTCGCTTTGCACAAGCTATCCACGCGAAATATCCGGGCAAACTGCTGGCTTATAACTGCTCGCCGTCGTTCAACTGGCAGAAAAACCTCGACGACAAAACTATTGCCAGCTTCCAGCAGCAGCTGTCGGATATGGGCTACAAGTTCCAGTTCATCACCCTGGCAGGTATCCACAGCATGTGGTTCAACATGTTTGACCTGGCAAACGCCTATGCCCAGGGCGAGGGTATGAAGCACTACGTTGAGAAAGTGCAGCAGCCGGAATTTGCCGCCGCGAAAGATGGCTATACCTTCGTATCTCACCAGCAGGAAGTGGGTACAGGTTACTTCGATAAAGTGACGACTATTATTCAGGGCGGCACGTCTTCAGTCACCGCGCTGACCGGCTCCACTGAAGAATCGCAGTTCTAA", - "dna_sequence_length": 1305, - "functions": [ - "isocitrate lyase" - ], - "id": "CDS_3930", - "location": [ - [ - "NC_000913", - 4217109, - "+", - 1305 - ] - ], - "md5": "34b2396c510dd38d708e56c514d11e9e", - "parent_gene": "", - "protein_md5": "f995a4b2b1deaa2b2ef3164261dcedc9", - "protein_translation": "MKTRTQQIEELQKEWTQPRWEGITRPYSAEDVVKLRGSVNPECTLAQLGAAKMWRLLHGESKKGYINSLGALTGGQALQQAKAGIEAVYLSGWQVAADANLAASMYPDQSLYPANSVPAVVERINNTFRRADQIQWSAGIEPGDPRYVDYFLPIVADAEAGFGGVLNAFELMKAMIEAGAAAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARLAADVTGVPTLLVARTDADAADLITSDCDPYDSEFITGERTSEGFFRTHAGIEQAISRGLAYAPYADLVWCETSTPDLELARRFAQAIHAKYPGKLLAYNCSPSFNWQKNLDDKTIASFQQQLSDMGYKFQFITLAGIHSMWFNMFDLANAYAQGEGMKHYVEKVQQPEFAAAKDGYTFVSHQQEVGTGYFDKVTTIIQGGTSSVTALTGSTEESQF", - "protein_translation_length": 434, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "aceK" - ], - [ - "gene_synonym", - "NP_418440.1" - ], - [ - "gene_synonym", - "JW3976" - ], - [ - "gene_synonym", - "GeneID:944797" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P11071" - ], - [ - "gene_synonym", - "EcoGene:EG10026" - ], - [ - "gene_synonym", - "ASAP:ABE-0013131" - ], - [ - "gene_synonym", - "GI:16131842" - ], - [ - "gene_synonym", - "b4016" - ], - [ - "gene_synonym", - "ECK4008" - ] - ], - "dna_sequence": "ATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGCATGCTGTCCAGCAGGCGATGAAAAACCGTATCCATCTTTACGATCATCACGTTGGTCTGGTCGTGGAGCAACTGCGCTGCATTACTAACGGCCAAAGTACGGACGCGGCATTTTTACTACGTGTTAAAGAGCATTACACCCGGCTGTTGCCGGATTACCCGCGCTTCGAGATTGCGGAGAGCTTTTTTAACTCCGTGTACTGTCGGTTATTTGACCACCGCTCGCTTACTCCCGAGCGGCTTTTTATCTTTAGCTCTCAGCCAGAGCGCCGCTTTCGTACCATTCCCCGCCCGCTGGCGAAAGACTTTCACCCCGATCACGGCTGGGAATCTCTACTGATGCGCGTTATCAGCGACCTACCGCTGCGCCTGCGCTGGCAGAATAAAAGCCGTGACATCCATTACATTATTCGCCATCTGACGGAAACGCTGGGGACAGACAACCTCGCGGAAAGTCATTTACAGGTGGCGAACGAACTGTTTTACCGCAATAAAGCCGCCTGGCTGGTAGGCAAACTGATCACACCTTCCGGCACATTGCCATTTTTGCTGCCGATCCACCAGACGGACGACGGCGAGTTATTTATTGATACCTGCCTGACGACGACCGCCGAAGCGAGCATTGTTTTTGGCTTTGCGCGTTCTTATTTTATGGTTTATGCGCCGCTGCCCGCAGCGCTGGTCGAGTGGCTACGGGAAATTCTGCCAGGTAAAACCACCGCTGAATTGTATATGGCTATCGGCTGCCAGAAGCACGCCAAAACCGAAAGCTACCGCGAATATCTCGTTTATCTACAGGGCTGTAATGAGCAGTTCATTGAAGCGCCGGGTATTCGTGGAATGGTGATGTTGGTGTTTACGCTGCCGGGCTTTGATCGGGTATTCAAAGTCATCAAAGACAGGTTCGCGCCGCAGAAAGAGATGTCTGCCGCTCACGTTCGTGCCTGCTATCAACTGGTGAAAGAGCACGATCGCGTGGGCCGAATGGCGGACACCCAGGAGTTTGAAAACTTTGTGCTGGAGAAGCGGCATATTTCCCCGGCATTAATGGAATTACTGCTTCAGGAAGCAGCGGAAAAAATCACCGATCTCGGCGAACAAATTGTGATTCGCCATCTTTATATTGAGCGGCGGATGGTGCCGCTCAATATCTGGCTGGAACAAGTGGAAGGTCAGCAGTTGCGCGACGCCATTGAAGAATACGGTAACGCTATTCGCCAGCTTGCCGCTGCTAACATTTTCCCTGGCGACATGCTGTTTAAAAACTTCGGTGTCACCCGTCACGGGCGTGTGGTTTTTTATGATTACGATGAAATTTGCTACATGACGGAAGTGAATTTCCGCGACATCCCGCCGCCGCGCTATCCGGAAGACGAACTTGCCAGCGAACCGTGGTACAGCGTCTCGCCGGGCGATGTTTTCCCGGAAGAGTTTCGCCACTGGCTATGCGCCGACCCGCGTATTGGTCCGCTGTTTGAAGAGATGCACGCCGACCTGTTCCGCGCTGATTACTGGCGCGCACTACAAAACCGCATACGTGAAGGGCATGTGGAAGATGTTTATGCGTATCGGCGCAGGCAAAGATTTAGCGTACGGTATGGGGAGATGCTTTTTTGA", - "dna_sequence_length": 1737, - "functions": [ - "isocitrate dehydrogenase kinase/phosphatase" - ], - "id": "CDS_3931", - "location": [ - [ - "NC_000913", - 4218596, - "+", - 1737 - ] - ], - "md5": "2e2ffcc032e4ddd9aa549f5301f44fe8", - "parent_gene": "", - "protein_md5": "c4bb6aec9b60aa072c62804bbd137730", - "protein_translation": "MPRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQQAMKNRIHLYDHHVGLVVEQLRCITNGQSTDAAFLLRVKEHYTRLLPDYPRFEIAESFFNSVYCRLFDHRSLTPERLFIFSSQPERRFRTIPRPLAKDFHPDHGWESLLMRVISDLPLRLRWQNKSRDIHYIIRHLTETLGTDNLAESHLQVANELFYRNKAAWLVGKLITPSGTLPFLLPIHQTDDGELFIDTCLTTTAEASIVFGFARSYFMVYAPLPAALVEWLREILPGKTTAELYMAIGCQKHAKTESYREYLVYLQGCNEQFIEAPGIRGMVMLVFTLPGFDRVFKVIKDRFAPQKEMSAAHVRACYQLVKEHDRVGRMADTQEFENFVLEKRHISPALMELLLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEICYMTEVNFRDIPPPRYPEDELASEPWYSVSPGDVFPEEFRHWLCADPRIGPLFEEMHADLFRADYWRALQNRIREGHVEDVYAYRRRQRFSVRYGEMLF", - "protein_translation_length": 578, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjaC" - ], - [ - "gene_synonym", - "GeneID:944933" - ], - [ - "gene_synonym", - "NP_418441.1" - ], - [ - "gene_synonym", - "arpA" - ], - [ - "gene_synonym", - "JW3977" - ], - [ - "gene_synonym", - "EcoGene:EG11208" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23325" - ], - [ - "gene_synonym", - "ASAP:ABE-0013133" - ], - [ - "gene_synonym", - "GI:16131843" - ], - [ - "gene_synonym", - "b4017" - ], - [ - "gene_synonym", - "ECK4009" - ] - ], - "dna_sequence": "ATGATTACTCGTATTCCTCGTAGTTCTTTCTCTGCAAATATTAATAATACAGCCCAGACAAATGAACACCAAACCCTGAGTGAATTGTTTTATAAAGAACTCGAGGATAAATTTTCTGGCAAGGAGCTGGCGACGCCTCTATTAAAAAGCTTCTCAGAGAACTGTAGACAAAATGGTCGTCATATCTTTAGCAACAAGGATTTTGTCATTAAATTTTCCACGTCCGTCTTACAAGCTGATAAGAAAGAAATTACGATAATTAATAAAAACGAAAACACGACACTTACTCAAACCATTGCCCCAATATTTGAAAAATACCTAATGGAAATTTTACCTCAACGCTCAGACACTCTTGATAAACAAGAATTAAACCTAAAATCAGATAGAAAAGAAAAAGAATTCCCAAGAATTAAACTTAATGGTCAATGTTATTTTCCGGGGCGACCCCAAAACCGTATAGTATGCCGACACATTGCTGCACAATATATTAATGATATTTATCAGAATGTTGATTACAAACCCCATCAAGATGATTACTCTTCAGCTGAAAAATTTCTCACGCACTTCAACAAAAAATGCAAAAACCAGACTTTGGCGTTGGTTTCCAGCCGTCCTGAGGGGCGTTGCGTTGCTGCCTGCGGTGATTTCGGGCTAGTTATGAAAGCATATTTTGACAAGATGGAATCAAATGGCATCAGTGTTATGGCAGCCATATTACTGGTGGATAACCATGCTTTGACGGTCCGGCTAAGAATAAAGAACACAACTGAAGGATGTACCCATTACGTGGTTTCGGTTTATGATCCTAATGTAACTAACGATAAAATAAGAATTATGAGCGAAAGCAAAGAGAATATTAAACACTATTCTCTGATGGATTTTATGAATGTAGATTATAGCCTCCTGAAATGGTCAAATGATCATGTTATTAATCAATCTGTTGCAATAATTCCAGCACTTCCGAAAGAACAGCTATTGATGTTAAAAGGATCTGTGGATGAAATAACCCCTCCATTATCACCTGCAACGATGAATTTGCTAATGGCAATTGGTCAGAATCACCAACTTACGCAACTGATGATTCAACTCCAGAAAATGCCAGAACTACATAGAACAGAAATGTTGACTGCCTATAATAGTATTAACCTGCCAGGTTTATATTTGGCTATAAATTATGGTAATGCGGATATCGTTGAGACTATTTTCAATTCATTGTCAGAAACAGGATATGAAGGATTACTCTCGAAAAAAAATCTCATGCATATTCTGGAGGCAAAAGATAAAAATGGTTTTTCTGGATTATTTTTAGCGATATCACGTAAGGATAAAAATGTTGTAACCTCGATTCTGAACGCCTTACCTAAACTGGCCGCAACACATCATTTAGATAACGAACAAGTGTATAAATTCCTGAGTGCCAAAAATAGAACGTCCAGCCATGTTTTATACCATGTTATGGCGAATGGTGATGCCGACATGCTGAAAATTGTTTTGAACGCGTTACCTTTGTTAATTCGCACATGTCATTTGACTAAAGAACAGGTACTCGATCTCCTGAAGGCAAAGGATTTTTATGGTTGCCCAGGACTATATCTGGCGATGCAAAATGGACATAGCGATATCGTGAAAGTTATTCTTGAAGCATTGCCCAGCCTAGCCCAGGAAATTAACATTTCAGCTTCCGATATTGTAGATCTTCTGACCGCTAAAAGTCTTGCGCGCGACACGGGTTTGTTTATGGCCATGCAGCGCGGACACATGAACGTTATTAATACTATTTTTAACGCATTACCCACTCTGTTTAATACGTTTAAATTCGATAAAAAAAATATGAAGCCCCTCCTCCTGGCAAATAATTCTAATGAATATCCCGGTTTGTTTTCAGCGATACAGCATAAACAACAAAATGTTGTAGAGACGGTTTATCTTGCTTTATCTGACCATGCACGCCTGTTTGGATTTACCGCTGAAGATATTATGGATTTTTGGCAACACAAAGCCCCACAAAAATACTCTGCCTTTGAGTTGGCTTTTGAATTTGGTCACCGGGTTATTGCTGAATTAATCCTTAATACATTAAATAAGATGGCTGAAAGCTTTGGCTTTACGGATAACCCTCGATACATTGCGGAGAAAAATTATATGGAAGCTTTACTCAAAAAAGCATCTCCCCATACCGTACGCTAA", - "dna_sequence_length": 2187, - "functions": [ - "ankyrin repeat protein" - ], - "id": "CDS_3932", - "location": [ - [ - "NC_000913", - 4222487, - "-", - 2187 - ] - ], - "md5": "0480880ce9b96ad5dbd588fa20f4ffde", - "parent_gene": "", - "protein_md5": "aa9279085f8fa32ef1430017e4d9f489", - "protein_translation": "MITRIPRSSFSANINNTAQTNEHQTLSELFYKELEDKFSGKELATPLLKSFSENCRQNGRHIFSNKDFVIKFSTSVLQADKKEITIINKNENTTLTQTIAPIFEKYLMEILPQRSDTLDKQELNLKSDRKEKEFPRIKLNGQCYFPGRPQNRIVCRHIAAQYINDIYQNVDYKPHQDDYSSAEKFLTHFNKKCKNQTLALVSSRPEGRCVAACGDFGLVMKAYFDKMESNGISVMAAILLVDNHALTVRLRIKNTTEGCTHYVVSVYDPNVTNDKIRIMSESKENIKHYSLMDFMNVDYSLLKWSNDHVINQSVAIIPALPKEQLLMLKGSVDEITPPLSPATMNLLMAIGQNHQLTQLMIQLQKMPELHRTEMLTAYNSINLPGLYLAINYGNADIVETIFNSLSETGYEGLLSKKNLMHILEAKDKNGFSGLFLAISRKDKNVVTSILNALPKLAATHHLDNEQVYKFLSAKNRTSSHVLYHVMANGDADMLKIVLNALPLLIRTCHLTKEQVLDLLKAKDFYGCPGLYLAMQNGHSDIVKVILEALPSLAQEINISASDIVDLLTAKSLARDTGLFMAMQRGHMNVINTIFNALPTLFNTFKFDKKNMKPLLLANNSNEYPGLFSAIQHKQQNVVETVYLALSDHARLFGFTAEDIMDFWQHKAPQKYSAFELAFEFGHRVIAELILNTLNKMAESFGFTDNPRYIAEKNYMEALLKKASPHTVR", - "protein_translation_length": 728, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16528" - ], - [ - "gene_synonym", - "JW3978" - ], - [ - "gene_synonym", - "EcoGene:EG10491" - ], - [ - "gene_synonym", - "GI:90111675" - ], - [ - "gene_synonym", - "ASAP:ABE-0013136" - ], - [ - "gene_synonym", - "b4018" - ], - [ - "gene_synonym", - "ECK4010" - ], - [ - "gene_synonym", - "iclR" - ], - [ - "gene_synonym", - "GeneID:948524" - ], - [ - "gene_synonym", - "NP_418442.2" - ] - ], - "dna_sequence": "ATGGTCGCACCCATTCCCGCGAAACGCGGCAGAAAACCCGCCGTTGCCACCGCACCAGCGACTGGACAGGTTCAGTCTTTAACGCGTGGCCTGAAATTACTGGAGTGGATTGCCGAATCCAATGGCAGTGTGGCACTCACGGAACTGGCGCAACAAGCCGGGTTACCCAATTCCACGACCCACCGCCTGCTAACCACGATGCAACAGCAGGGTTTCGTGCGTCAGGTTGGCGAACTGGGACATTGGGCAATCGGCGCACATGCCTTTATGGTCGGCAGCAGCTTTCTCCAGAGCCGTAATTTGTTAGCGATTGTTCACCCTATCCTGCGCAATCTAATGGAAGAGTCTGGCGAAACGGTCAATATGGCGGTGCTTGATCAAAGCGATCACGAAGCGATTATTATCGACCAGGTACAGTGTACGCATCTGATGCGAATGTCCGCGCCTATCGGCGGTAAATTGCCGATGCACGCTTCCGGTGCGGGTAAAGCCTTTTTAGCCCAACTGAGCGAAGAACAGGTGACGAAGCTGCTGCACCGCAAAGGGTTACATGCCTATACCCACGCAACGCTGGTGTCTCCTGTGCATTTAAAAGAAGATCTCGCCCAAACGCGCAAACGGGGTTATTCATTTGACGATGAGGAACATGCACTGGGGCTACGTTGCCTTGCAGCGTGTATTTTCGATGAGCACCGTGAACCGTTTGCCGCAATTTCTATTTCCGGACCGATTTCACGTATTACCGATGACCGCGTGACCGAGTTTGGCGCGATGGTGATTAAAGCGGCGAAGGAAGTGACGCTGGCGTACGGTGGAATGCGCTGA", - "dna_sequence_length": 825, - "functions": [ - "transcriptional repressor" - ], - "id": "CDS_3933", - "location": [ - [ - "NC_000913", - 4223628, - "-", - 825 - ] - ], - "md5": "e285c7d31c4dcc1f13ffab7a7fc73b9a", - "parent_gene": "", - "protein_md5": "1717022bae5763ebfa317e2ebce04a07", - "protein_translation": "MVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSVALTELAQQAGLPNSTTHRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLLAIVHPILRNLMEESGETVNMAVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASGAGKAFLAQLSEEQVTKLLHRKGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHALGLRCLAACIFDEHREPFAAISISGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR", - "protein_translation_length": 274, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3979" - ], - [ - "gene_synonym", - "GeneID:948522" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P13009" - ], - [ - "gene_synonym", - "ASAP:ABE-0013140" - ], - [ - "gene_synonym", - "b4019" - ], - [ - "gene_synonym", - "ECK4011" - ], - [ - "gene_synonym", - "metH" - ], - [ - "gene_synonym", - "NP_418443.1" - ], - [ - "gene_synonym", - "EcoGene:EG10587" - ], - [ - "gene_synonym", - "GI:16131845" - ] - ], - "dna_sequence": "GTGAGCAGCAAAGTGGAACAACTGCGTGCGCAGTTAAATGAACGTATTCTGGTGCTGGACGGCGGTATGGGCACCATGATCCAGAGTTATCGACTGAACGAAGCCGATTTTCGTGGTGAACGCTTTGCCGACTGGCCATGCGACCTCAAAGGCAACAACGACCTGCTGGTACTCAGTAAACCGGAAGTGATCGCCGCTATCCACAACGCCTACTTTGAAGCGGGCGCGGATATCATCGAAACCAACACCTTCAACTCCACGACCATTGCGATGGCGGATTACCAGATGGAATCCCTGTCGGCGGAAATCAACTTTGCGGCGGCGAAACTGGCGCGAGCTTGTGCTGACGAGTGGACCGCGCGCACGCCAGAGAAACCGCGCTACGTTGCCGGTGTTCTCGGCCCGACCAACCGCACGGCGTCTATTTCTCCGGACGTCAACGATCCGGCATTTCGTAATATCACTTTTGACGGGCTGGTGGCGGCTTATCGAGAGTCCACCAAAGCGCTGGTGGAAGGTGGCGCGGATCTGATCCTGATTGAAACCGTTTTCGACACCCTTAACGCCAAAGCGGCGGTATTTGCGGTGAAAACGGAGTTTGAAGCGCTGGGCGTTGAGCTGCCGATTATGATCTCCGGCACCATCACCGACGCCTCCGGGCGCACGCTCTCCGGGCAGACCACCGAAGCATTTTACAACTCATTGCGCCACGCCGAAGCTCTGACCTTTGGCCTGAACTGTGCGCTGGGGCCCGATGAACTGCGCCAGTACGTGCAGGAGCTGTCACGGATTGCGGAATGCTACGTCACCGCGCACCCGAACGCCGGGCTACCCAACGCCTTTGGTGAGTACGATCTCGACGCCGACACGATGGCAAAACAGATACGTGAATGGGCGCAAGCGGGTTTTCTCAATATCGTCGGCGGCTGCTGTGGCACCACGCCACAACATATTGCAGCGATGAGTCGTGCAGTAGAAGGATTAGCGCCGCGCAAACTGCCGGAAATTCCCGTAGCCTGCCGTTTGTCCGGCCTGGAGCCGCTGAACATTGGCGAAGATAGCCTGTTTGTGAACGTGGGTGAACGCACCAACGTCACCGGTTCCGCTAAGTTCAAGCGCCTGATCAAAGAAGAGAAATACAGCGAGGCGCTGGATGTCGCGCGTCAACAGGTGGAAAACGGCGCGCAGATTATCGATATCAACATGGATGAAGGGATGCTCGATGCCGAAGCGGCGATGGTGCGTTTTCTCAATCTGATTGCCGGTGAACCGGATATCGCTCGCGTGCCGATTATGATCGACTCCTCAAAATGGGACGTCATTGAAAAAGGTCTGAAGTGTATCCAGGGCAAAGGCATTGTTAACTCTATCTCGATGAAAGAGGGCGTCGATGCCTTTATCCATCACGCGAAATTGTTGCGTCGCTACGGTGCGGCAGTGGTGGTAATGGCCTTTGACGAACAGGGACAGGCCGATACTCGCGCACGGAAAATCGAGATTTGCCGTCGGGCGTACAAAATCCTCACCGAAGAGGTTGGCTTCCCGCCAGAAGATATCATCTTCGACCCAAACATCTTCGCGGTCGCAACTGGCATTGAAGAGCACAACAACTACGCGCAGGACTTTATCGGCGCGTGTGAAGACATCAAACGCGAACTGCCGCACGCGCTGATTTCCGGCGGCGTATCTAACGTTTCTTTCTCGTTCCGTGGCAACGATCCGGTGCGCGAAGCCATTCACGCAGTGTTCCTCTACTACGCTATTCGCAATGGCATGGATATGGGGATCGTCAACGCCGGGCAACTGGCGATTTACGACGACCTACCCGCTGAACTGCGCGACGCGGTGGAAGATGTGATTCTTAATCGTCGCGACGATGGCACCGAGCGTTTACTGGAGCTTGCCGAGAAATATCGCGGCAGCAAAACCGACGACACCGCCAACGCCCAGCAGGCGGAGTGGCGCTCGTGGGAAGTGAATAAACGTCTGGAATACTCGCTGGTCAAAGGCATTACCGAGTTTATCGAGCAGGATACCGAAGAAGCCCGCCAGCAGGCTACGCGCCCGATTGAAGTGATTGAAGGCCCGTTGATGGACGGCATGAATGTGGTCGGCGACCTGTTTGGCGAAGGGAAAATGTTCCTGCCACAGGTGGTCAAATCGGCGCGCGTCATGAAACAGGCGGTGGCCTACCTCGAACCGTTTATTGAAGCCAGCAAAGAGCAGGGCAAAACCAACGGCAAGATGGTGATCGCCACCGTGAAGGGCGACGTCCACGACATCGGTAAAAATATCGTTGGTGTGGTGCTGCAATGTAACAACTACGAAATTGTCGATCTCGGCGTTATGGTGCCTGCGGAAAAAATTCTCCGTACCGCTAAAGAAGTGAATGCTGATCTGATTGGCCTTTCGGGGCTTATCACGCCGTCGCTGGACGAGATGGTTAACGTGGCGAAAGAGATGGAGCGTCAGGGCTTCACTATTCCGTTACTGATTGGCGGCGCGACGACCTCAAAAGCGCACACGGCGGTGAAAATCGAGCAGAACTACAGCGGCCCGACGGTGTATGTGCAGAATGCCTCGCGTACCGTTGGTGTGGTGGCGGCGCTGCTTTCCGATACCCAGCGTGATGATTTTGTCGCTCGTACCCGCAAGGAGTACGAAACCGTACGTATTCAGCACGGGCGCAAGAAACCGCGCACACCACCGGTCACGCTGGAAGCGGCGCGCGATAACGATTTCGCTTTTGACTGGCAGGCTTACACGCCGCCGGTGGCGCACCGTCTCGGCGTGCAGGAAGTCGAAGCCAGCATCGAAACGCTGCGTAATTACATCGACTGGACACCGTTCTTTATGACCTGGTCGCTGGCCGGGAAGTATCCGCGCATTCTGGAAGATGAAGTGGTGGGCGTTGAGGCGCAGCGGCTGTTTAAAGACGCCAACGACATGCTGGATAAATTAAGCGCCGAGAAAACGCTGAATCCGCGTGGCGTGGTGGGCCTGTTCCCGGCAAACCGTGTGGGCGATGACATTGAAATCTACCGTGACGAAACGCGTACCCATGTGATCAACGTCAGCCACCATCTGCGTCAACAGACCGAAAAAACAGGCTTCGCTAACTACTGTCTCGCTGACTTCGTTGCGCCGAAGCTTTCTGGTAAAGCAGATTACATCGGCGCATTTGCCGTGACTGGCGGGCTGGAAGAGGACGCACTGGCTGATGCCTTTGAAGCGCAGCACGATGATTACAACAAAATCATGGTGAAAGCGCTTGCCGACCGTTTAGCCGAAGCCTTTGCGGAGTATCTCCATGAGCGTGTGCGTAAAGTCTACTGGGGCTATGCGCCGAACGAGAACCTCAGCAACGAAGAGCTGATCCGCGAAAACTACCAGGGCATCCGTCCGGCACCGGGCTATCCGGCCTGCCCGGAACATACGGAAAAAGCCACCATCTGGGAGCTGCTGGAAGTGGAAAAACACACTGGCATGAAACTCACAGAATCTTTCGCCATGTGGCCCGGTGCATCGGTTTCGGGTTGGTACTTCAGCCACCCGGACAGCAAGTACTACGCTGTAGCACAAATTCAGCGCGATCAGGTTGAAGATTATGCCCGCCGTAAAGGTATGAGCGTTACCGAAGTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGA", - "dna_sequence_length": 3684, - "functions": [ - "homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent" - ], - "id": "CDS_3934", - "location": [ - [ - "NC_000913", - 4223828, - "+", - 3684 - ] - ], - "md5": "11413e6d94e7952cb82ec6b0c1f2f341", - "parent_gene": "", - "protein_md5": "aa3986a1e1c4cddc5ebb93ae1de90667", - "protein_translation": "MSSKVEQLRAQLNERILVLDGGMGTMIQSYRLNEADFRGERFADWPCDLKGNNDLLVLSKPEVIAAIHNAYFEAGADIIETNTFNSTTIAMADYQMESLSAEINFAAAKLARACADEWTARTPEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDGLVAAYRESTKALVEGGADLILIETVFDTLNAKAAVFAVKTEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSLRHAEALTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAGLPNAFGEYDLDADTMAKQIREWAQAGFLNIVGGCCGTTPQHIAAMSRAVEGLAPRKLPEIPVACRLSGLEPLNIGEDSLFVNVGERTNVTGSAKFKRLIKEEKYSEALDVARQQVENGAQIIDINMDEGMLDAEAAMVRFLNLIAGEPDIARVPIMIDSSKWDVIEKGLKCIQGKGIVNSISMKEGVDAFIHHAKLLRRYGAAVVVMAFDEQGQADTRARKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQDFIGACEDIKRELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAGQLAIYDDLPAELRDAVEDVILNRRDDGTERLLELAEKYRGSKTDDTANAQQAEWRSWEVNKRLEYSLVKGITEFIEQDTEEARQQATRPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAYLEPFIEASKEQGKTNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKAHTAVKIEQNYSGPTVYVQNASRTVGVVAALLSDTQRDDFVARTRKEYETVRIQHGRKKPRTPPVTLEAARDNDFAFDWQAYTPPVAHRLGVQEVEASIETLRNYIDWTPFFMTWSLAGKYPRILEDEVVGVEAQRLFKDANDMLDKLSAEKTLNPRGVVGLFPANRVGDDIEIYRDETRTHVINVSHHLRQQTEKTGFANYCLADFVAPKLSGKADYIGAFAVTGGLEEDALADAFEAQHDDYNKIMVKALADRLAEAFAEYLHERVRKVYWGYAPNENLSNEELIRENYQGIRPAPGYPACPEHTEKATIWELLEVEKHTGMKLTESFAMWPGASVSGWYFSHPDSKYYAVAQIQRDQVEDYARRKGMSVTEVERWLAPNLGYDAD", - "protein_translation_length": 1227, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418444.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF43" - ], - [ - "gene_synonym", - "yjbB" - ], - [ - "gene_synonym", - "JW3980" - ], - [ - "gene_synonym", - "ASAP:ABE-0013143" - ], - [ - "gene_synonym", - "ECK4012" - ], - [ - "gene_synonym", - "EcoGene:EG11919" - ], - [ - "gene_synonym", - "GI:16131846" - ], - [ - "gene_synonym", - "GeneID:948521" - ], - [ - "gene_synonym", - "b4020" - ] - ], - "dna_sequence": "GTGTTAACGCTGCTTCACCTGCTTTCTGCCGTCGCCCTGCTGGTCTGGGGGACTCATATTGTTCGAACCGGCGTAATGCGCGTCTTCGGCGCGCGTTTGCGTACTGTCCTTAGCCGGAGCGTCGAAAAAAAGCCGCTCGCCTTTTGCGCGGGGATCGGCGTTACCGCACTGGTACAGAGCAGTAATGCCACCACCATGCTGGTGACCTCGTTTGTCGCTCAGGATCTGGTAGCCCTCGCACCGGCTCTGGTCATTGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTCAACAACAGTGCCGCCAATGCCGCAGCCCGCCGTGTCGCGCTGGGTAGTCTGCTGTTTAAGCTGGTGGGTAGCCTGATTATCCTGCCGTTTGTCCATTTGCTGGCAGAGACAATGGGGAAGTTGTCATTGCCAAAAGCGGAACTGGTGATCTATTTCCACGTCTTCTACAACCTTGTACGTTGCCTGGTCATGCTGCCATTTGTTGACCCGATGGCACGGTTTTGCAAAACGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGCGAAACCCTGCGCATTGGCGACGCCATGGAACAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCGGATGCCAAAAGAAGAGCTGGCGGAGGAAGAGTCGCGCCGCTGGGCAGAGATCATCGAAATGTCGCTCAACCTTGAACAGGCCTCCGATATCGTCGAGCGCATGGGCAGCGAAATTGCTGACAAATCACTGGCAGCACGGCGGGCATTTTCGCTTGATGGGTTGAAGGAACTGGATGCGCTCTATGAGCAATTGCTCAGTAATTTAAAGCTGGCAATGTCGGTGTTCTTCTCTGGCGATGTCACCAGCGCTCGTCGTTTGCGTCGCAGCAAACATCGTTTTCGCATTCTTAATCGCCGCTATTCCCACGCCCACGTCGATCGCCTGCATCAGCAAAACGTGCAGAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAA", - "dna_sequence_length": 1632, - "functions": [ - "putative Na+/Pi-cotransporter" - ], - "id": "CDS_3935", - "location": [ - [ - "NC_000913", - 4227731, - "+", - 1632 - ] - ], - "md5": "b108d05fea141fbe616ab6199c2186ca", - "parent_gene": "", - "protein_md5": "d93eb74b3c02235c5774a101f59ad24b", - "protein_translation": "MLTLLHLLSAVALLVWGTHIVRTGVMRVFGARLRTVLSRSVEKKPLAFCAGIGVTALVQSSNATTMLVTSFVAQDLVALAPALVIVLGADVGTALMARILTFDLSWLSPLLIFIGVIFFLGRKQSRAGQLGRVGIGLGLILLALELIVQAVTPITQANGVQVIFASLTGDILLDALIGAMFAIISYSSLAAVLLTATLTAAGIISFPVALCLVIGANLGSGLLAMLNNSAANAAARRVALGSLLFKLVGSLIILPFVHLLAETMGKLSLPKAELVIYFHVFYNLVRCLVMLPFVDPMARFCKTIIRDEPELDTQLRPKHLDVSALDTPTLALANAARETLRIGDAMEQMMEGLNKVMHGEPRQEKELRKLADDINVLYTAIKLYLARMPKEELAEEESRRWAEIIEMSLNLEQASDIVERMGSEIADKSLAARRAFSLDGLKELDALYEQLLSNLKLAMSVFFSGDVTSARRLRRSKHRFRILNRRYSHAHVDRLHQQNVQSIETSSLHLGLLGDMQRLNSLFCSVAYSVLEQPDEDEGRDEY", - "protein_translation_length": 543, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7C6" - ], - [ - "gene_synonym", - "JW3981" - ], - [ - "gene_synonym", - "pepE" - ], - [ - "gene_synonym", - "NP_418445.1" - ], - [ - "gene_synonym", - "b4021" - ], - [ - "gene_synonym", - "ASAP:ABE-0013146" - ], - [ - "gene_synonym", - "EcoGene:EG11920" - ], - [ - "gene_synonym", - "ECK4013" - ], - [ - "gene_synonym", - "GI:16131847" - ], - [ - "gene_synonym", - "GeneID:948520" - ] - ], - "dna_sequence": "ATGGAACTGCTTTTATTGAGTAACTCGACGCTGCCGGGTAAAGCCTGGCTGGAACATGCACTGCCGCTAATTGCTGAACAGTTGCAGGGTCGCCGCTCAGCGGTGTTTATCCCTTTCGCTGGCGTAACGCAGACCTGGGATGATTACACAGCGAAAACGGCTGCGGTTCTCGCTCCGCTGGGTGTTTCTGTCACCGGTATTCATAGCGTTGTCGATCCCGTTGCCGCGATTGAAAATGCTGAGATCGTGATTGTCGGCGGCGGGAATACTTTCCAGTTGCTGAAACAGTGCCGCGAGCGCGGGCTGCTGGCACCAATTACTGACGTGGTTAAACGTGGCGCTCTGTATATTGGCTGGAGCGCAGGCGCTAACCTTGCTTGCCCAACTATTCGTACCACCAACGATATGCCGATTGTCGATCCGCAAGGTTTCGATGCGCTAAATCTGTTCCCGCTGCAAATCAACCCGCACTTCACCAACGCGCTGCCGGAAGGCCATAAAGGTGAAACCCGTGAGCAGCGTATTCGCGAACTGCTGGTCGTCGCGCCAGAACTGACGATTATTGGTCTACCGGAAGGTAACTGGATCACAGTGAGTAAAGGTCACGCTACGCTGGGTGGCCCGAACACCACTTATGTGTTTAAGGCTGGTGAAGAAGCGGTTCCGCTGGAAGCTGGTCACCGTTTTTAA", - "dna_sequence_length": 690, - "functions": [ - "peptidase E, alpha-aspartyl dipeptidase" - ], - "id": "CDS_3936", - "location": [ - [ - "NC_000913", - 4230142, - "-", - 690 - ] - ], - "md5": "41b02ac750687c5b61a706c45e1617be", - "parent_gene": "", - "protein_md5": "2ad1e07b049baa236cacec426fe168ce", - "protein_translation": "MELLLLSNSTLPGKAWLEHALPLIAEQLQGRRSAVFIPFAGVTQTWDDYTAKTAAVLAPLGVSVTGIHSVVDPVAAIENAEIVIVGGGNTFQLLKQCRERGLLAPITDVVKRGALYIGWSAGANLACPTIRTTNDMPIVDPQGFDALNLFPLQINPHFTNALPEGHKGETREQRIRELLVVAPELTIIGLPEGNWITVSKGHATLGGPNTTYVFKAGEEAVPLEAGHRF", - "protein_translation_length": 229, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjbC" - ], - [ - "gene_synonym", - "JW3982" - ], - [ - "gene_synonym", - "GeneID:948519" - ], - [ - "gene_synonym", - "ECK4014" - ], - [ - "gene_synonym", - "NP_418446.1" - ], - [ - "gene_synonym", - "rluF" - ], - [ - "gene_synonym", - "ASAP:ABE-0013150" - ], - [ - "gene_synonym", - "b4022" - ], - [ - "gene_synonym", - "EcoGene:EG11921" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32684" - ], - [ - "gene_synonym", - "GI:16131848" - ] - ], - "dna_sequence": "ATGCTGCCCGACTCATCAGTCCGTTTAAATAAATACATCAGCGAAAGCGGAATTTGCTCACGCCGCGAAGCGGATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAACGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATGGCGAGCGCGATAACATTGTCGATTTCGTTAACCACAGCAAACGCGTGTTCCCGATTGGCCGCCTGGATAAAGACTCCCAGGGGCTGATTTTCCTCACCAATCACGGCGATCTGGTGAATAAGATCCTGCGTGCTGGCAATGATCATGAGAAAGAGTATCTGGTGACGGTCGATAAACCGATTACCGAGGAGTTTATTCGCGGCATGAGTGCGGGGGTGCCAATCCTCGGGACAGTGACCAAAAAGTGCAAAGTTAAAAAAGAAGCGCCGTTTGTCTTCCGCATTACCCTGGTGCAGGGGCTGAACCGTCAGATCCGGCGCATGTGCGAGCATTTCGGCTATGAAGTGAAAAAGCTGGAACGCACGCGCATCATGAACGTTAGCTTAAGCGGCATTCCGCTGGGGGAATGGCGCGATTTAACCGACGATGAGTTAATCGACCTCTTTAAGCTCATTGAAAATTCCTCTTCCGAGGTAAAACCTAAAGCGAAGGCCAAACCGAAAACAGCGGGCATCAAACGTCCAGTCGTTAAGATGGAAAAAACGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGA", - "dna_sequence_length": 873, - "functions": [ - "23S rRNA pseudouridine(2604) synthase" - ], - "id": "CDS_3937", - "location": [ - [ - "NC_000913", - 4230354, - "+", - 873 - ] - ], - "md5": "5bfbed0780696a71d901a04cc860eab4", - "parent_gene": "", - "protein_md5": "18085dc49132ac66c5998c97ebbf1595", - "protein_translation": "MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR", - "protein_translation_length": 290, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjbD" - ], - [ - "gene_synonym", - "JW3983" - ], - [ - "gene_synonym", - "GeneID:948518" - ], - [ - "gene_synonym", - "GI:16131849" - ], - [ - "gene_synonym", - "ASAP:ABE-0013153" - ], - [ - "gene_synonym", - "ECK4015" - ], - [ - "gene_synonym", - "b4023" - ], - [ - "gene_synonym", - "EcoGene:EG11922" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32685" - ], - [ - "gene_synonym", - "NP_418447.1" - ] - ], - "dna_sequence": "ATGGCACTCCCCCGTATTACCCAAAAAGAGATGACTGAACGCGAGCAGCGTGAACTTAAAACACTGCTGGATCGGGCGCGGATTGCGCATGGTCGCGTATTGACCAACTCCGAAACCAACAGCATTAAGAAAGATTACATCGATAAATTAATGGTTGAGCGTGAGGCTGAAGCGAAAAAAGCCCGCCAGTTGAAGAAAAAGCAGGCTTATAAACCGGATCCTGAAGCGTCATTTAGCTGGTCAGCAAATACGTCGACGCGCGGCAGGCGCTAA", - "dna_sequence_length": 273, - "functions": [ - "DUF3811 family protein" - ], - "id": "CDS_3938", - "location": [ - [ - "NC_000913", - 4231631, - "-", - 273 - ] - ], - "md5": "4c00af5ea47167f72ec6dc93223af4f2", - "parent_gene": "", - "protein_md5": "86e49383df817859f3cd644300bf75d7", - "protein_translation": "MALPRITQKEMTEREQRELKTLLDRARIAHGRVLTNSETNSIKKDYIDKLMVEREAEAKKARQLKKKQAYKPDPEASFSWSANTSTRGRR", - "protein_translation_length": 90, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW3984" - ], - [ - "gene_synonym", - "ECK4016" - ], - [ - "gene_synonym", - "ASAP:ABE-0013156" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08660" - ], - [ - "gene_synonym", - "lysC" - ], - [ - "gene_synonym", - "apk" - ], - [ - "gene_synonym", - "EcoGene:EG10550" - ], - [ - "gene_synonym", - "b4024" - ], - [ - "gene_synonym", - "NP_418448.1" - ], - [ - "gene_synonym", - "GI:16131850" - ], - [ - "gene_synonym", - "GeneID:948531" - ] - ], - "dna_sequence": "ATGTCTGAAATTGTTGTCTCCAAATTTGGCGGTACCAGCGTAGCTGATTTTGACGCCATGAACCGCAGCGCTGATATTGTGCTTTCTGATGCCAACGTGCGTTTAGTTGTCCTCTCGGCTTCTGCTGGTATCACTAATCTGCTGGTCGCTTTAGCTGAAGGACTGGAACCTGGCGAGCGATTCGAAAAACTCGACGCTATCCGCAACATCCAGTTTGCCATTCTGGAACGTCTGCGTTACCCGAACGTTATCCGTGAAGAGATTGAACGTCTGCTGGAGAACATTACTGTTCTGGCAGAAGCGGCGGCGCTGGCAACGTCTCCGGCGCTGACAGATGAGCTGGTCAGCCACGGCGAGCTGATGTCGACCCTGCTGTTTGTTGAGATCCTGCGCGAACGCGATGTTCAGGCACAGTGGTTTGATGTACGTAAAGTGATGCGTACCAACGACCGATTTGGTCGTGCAGAGCCAGATATAGCCGCGCTGGCGGAACTGGCCGCGCTGCAGCTGCTCCCACGTCTCAATGAAGGCTTAGTGATCACCCAGGGATTTATCGGTAGCGAAAATAAAGGTCGTACAACGACGCTTGGCCGTGGAGGCAGCGATTATACGGCAGCCTTGCTGGCGGAGGCTTTACACGCATCTCGTGTTGATATCTGGACCGACGTCCCGGGCATCTACACCACCGATCCACGCGTAGTTTCCGCAGCAAAACGCATTGATGAAATCGCGTTTGCCGAAGCGGCAGAGATGGCAACTTTTGGTGCAAAAGTACTGCATCCGGCAACGTTGCTACCCGCAGTACGCAGCGATATCCCGGTCTTTGTCGGCTCCAGCAAAGACCCACGCGCAGGTGGTACGCTGGTGTGCAATAAAACTGAAAATCCGCCGCTGTTCCGCGCTCTGGCGCTTCGTCGCAATCAGACTCTGCTCACTTTGCACAGCCTGAATATGCTGCATTCTCGCGGTTTCCTCGCGGAAGTTTTCGGCATCCTCGCGCGGCATAATATTTCGGTAGACTTAATCACCACGTCAGAAGTGAGCGTGGCATTAACCCTTGATACCACCGGTTCAACCTCCACTGGCGATACGTTGCTGACGCAATCTCTGCTGATGGAGCTTTCCGCACTGTGTCGGGTGGAGGTGGAAGAAGGTCTGGCGCTGGTCGCGTTGATTGGCAATGACCTGTCAAAAGCCTGCGGCGTTGGCAAAGAGGTATTCGGCGTACTGGAACCGTTCAACATTCGCATGATTTGTTATGGCGCATCCAGCCATAACCTGTGCTTCCTGGTGCCCGGCGAAGATGCCGAGCAGGTGGTGCAAAAACTGCATAGTAATTTGTTTGAGTAA", 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"gene_synonym", - "ASAP:ABE-0013163" - ], - [ - "gene_synonym", - "pgi" - ], - [ - "gene_synonym", - "b4025" - ], - [ - "gene_synonym", - "NP_418449.1" - ], - [ - "gene_synonym", - "EcoGene:EG10702" - ], - [ - "gene_synonym", - "GI:16131851" - ], - [ - "gene_synonym", - "GeneID:948535" - ] - ], - "dna_sequence": "ATGAAAAACATCAATCCAACGCAGACCGCTGCCTGGCAGGCACTACAGAAACACTTCGATGAAATGAAAGACGTTACGATCGCCGATCTTTTTGCTAAAGACGGCGATCGTTTTTCTAAGTTCTCCGCAACCTTCGACGATCAGATGCTGGTGGATTACTCCAAAAACCGCATCACTGAAGAGACGCTGGCGAAATTACAGGATCTGGCGAAAGAGTGCGATCTGGCGGGCGCGATTAAGTCGATGTTCTCTGGCGAGAAGATCAACCGCACTGAAAACCGCGCCGTGCTGCACGTAGCGCTGCGTAACCGTAGCAATACCCCGATTTTGGTTGATGGCAAAGACGTAATGCCGGAAGTCAACGCGGTGCTGGAGAAGATGAAAACCTTCTCAGAAGCGATTATTTCCGGTGAGTGGAAAGGTTATACCGGCAAAGCAATCACTGACGTAGTGAACATCGGGATCGGCGGTTCTGACCTCGGCCCATACATGGTGACCGAAGCTCTGCGTCCGTACAAAAACCACCTGAACATGCACTTTGTTTCTAACGTCGATGGGACTCACATCGCGGAAGTGCTGAAAAAAGTAAACCCGGAAACCACGCTGTTCTTGGTAGCATCTAAAACCTTCACCACTCAGGAAACTATGACCAACGCCCATAGCGCGCGTGACTGGTTCCTGAAAGCGGCAGGTGATGAAAAACACGTTGCAAAACACTTTGCGGCGCTTTCCACCAATGCCAAAGCCGTTGGCGAGTTTGGTATTGATACTGCCAACATGTTCGAGTTCTGGGACTGGGTTGGCGGCCGTTACTCTTTGTGGTCAGCGATTGGCCTGTCGATTGTTCTCTCCATCGGCTTTGATAACTTCGTTGAACTGCTTTCCGGCGCACACGCGATGGACAAGCATTTCTCCACCACGCCTGCCGAGAAAAACCTGCCTGTACTGCTGGCGCTGATTGGCATCTGGTACAACAATTTCTTTGGTGCGGAAACTGAAGCGATTCTGCCGTATGACCAGTATATGCACCGTTTCGCGGCGTACTTCCAGCAGGGCAATATGGAGTCCAACGGTAAGTATGTTGACCGTAACGGTAACGTTGTGGATTACCAGACTGGCCCGATTATCTGGGGTGAACCAGGCACTAACGGTCAGCACGCGTTCTACCAGCTGATCCACCAGGGAACCAAAATGGTACCGTGCGATTTCATCGCTCCGGCTATCACCCATAACCCGCTCTCTGATCATCACCAGAAACTGCTGTCTAACTTCTTCGCCCAGACCGAAGCGCTGGCGTTTGGTAAATCCCGCGAAGTGGTTGAGCAGGAATATCGTGATCAGGGTAAAGATCCGGCAACGCTTGACTACGTGGTGCCGTTCAAAGTATTCGAAGGTAACCGCCCGACCAACTCCATCCTGCTGCGTGAAATCACTCCGTTCAGCCTGGGTGCGTTGATTGCGCTGTATGAGCACAAAATCTTTACTCAGGGCGTGATCCTGAACATCTTCACCTTCGACCAGTGGGGCGTGGAACTGGGTAAACAGCTGGCGAACCGTATTCTGCCAGAGCTGAAAGATGATAAAGAAATCAGCAGCCACGATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAA", 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"gene_synonym", - "yjbE" - ], - [ - "gene_synonym", - "ASAP:ABE-0013168" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF45" - ], - [ - "gene_synonym", - "EcoGene:EG11923" - ], - [ - "gene_synonym", - "b4026" - ], - [ - "gene_synonym", - "GI:16131852" - ], - [ - "gene_synonym", - "NP_418450.1" - ], - [ - "gene_synonym", - "GeneID:948534" - ], - [ - "gene_synonym", - "ECK4018" - ] - ], - "dna_sequence": "ATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTCGGCGGTGGGTGTCGCGCTTGCGGCAACCGGTGGCGGTGATGGTTCTAATACCGGGACCACCACAACCACGACCACCAGTACCCAGTAA", - "dna_sequence_length": 243, - "functions": [ - "extracellular polysaccharide production threonine-rich protein" - ], - "id": "CDS_3941", - "location": [ - [ - "NC_000913", - 4235906, - "+", - 243 - ] - ], - "md5": "f9e2cdc261a7869c30898e873a300898", - "parent_gene": "", - "protein_md5": "ea8c0d748b8851e307dded14ffe3c860", - "protein_translation": "MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSATSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ", - "protein_translation_length": 80, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjbF" - ], - [ - "gene_synonym", - "GeneID:948533" - ], - [ - "gene_synonym", - "JW5711" - ], - [ - "gene_synonym", - "ASAP:ABE-0013172" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32687" - ], - [ - "gene_synonym", - "GI:90111676" - ], - [ - "gene_synonym", - "b4027" - ], - [ - "gene_synonym", - "NP_418451.4" - ], - [ - "gene_synonym", - "EcoGene:EG11924" - ], - [ - "gene_synonym", - "ECK4019" - ] - ], - "dna_sequence": "GTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCCACGACTAAAGAGCTGGGCAATTCACTGTGGGACAGTCTGTTCGGCACGCCAGGCGTACAGCTGACGGATGATGATATTCAAAATATGCCCTACGCCAGCCAGTACATGCAGCTTAATGGCGGGCCGCAGTTATTTGTGGTGCTGGCCTTCGCTGAAGACGGACAACAAAAATGGGTCACTCAGGATCAGGCTACTCTCGTTACCCAACATGGCCGTCTGGTGAAGACTCTGCTCGGCGGCGACAACCTGATTGAAGTGAATAACCTTGCTGCCGACCCGCTGATTAAACCCGCACAAATCGTTGATGGCGCAAGCTGGACGCGCACGATGGGCTGGACCGAGTACCAGCAGGTACGCTACGCCACCGCACGCTCAGTCTTCAAATGGGATGGCACCGATACCGTCAAAGTCGGCAGCGATGAAACCCCGGTTCGCGTGCTGGACGAAGAAGTCTCCACCGACCAGGCGCGCTGGCATAACCGCTATTGGATCGACAGCGAAGGGCAAATTCGCCAGTCGGAACAGTATCTCGGCGCGGATTATTTTCCGGTGAAAACCACTCTCATCAAGGCGGCAAAACAATGA", - "dna_sequence_length": 639, - "functions": [ - "extracellular polysaccharide production lipoprotein" - ], - "id": "CDS_3942", - "location": [ - [ - "NC_000913", - 4236262, - "+", - 639 - ] - ], - "md5": "adeb3e322ecc478871ccdeb11c6c4a0f", - "parent_gene": "", - "protein_md5": "976dc26e99814a3392f2623aa6818400", - "protein_translation": "MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDIQNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKTLLGGDNLIEVNNLAADPLIKPAQIVDGASWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDETPVRVLDEEVSTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ", - "protein_translation_length": 212, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjbG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32688" - ], - [ - "gene_synonym", - "EcoGene:EG11925" - ], - [ - "gene_synonym", - "NP_418452.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013174" - ], - [ - "gene_synonym", - "JW3988" - ], - [ - "gene_synonym", - "GeneID:948526" - ], - [ - "gene_synonym", - "GI:16131854" - ], - [ - "gene_synonym", - "b4028" - ], - [ - "gene_synonym", - "ECK4020" - ] - ], - "dna_sequence": "ATGATTAAACAAACTATTGTCGCGTTGCTTTTGAGTGTGGGAGCGTCATCGGTCTTCGCGGCAGGAACCGTCAAGGTGTTCAGCAATGGCAGCAGTGAGGCCAAAACGCTAACGGGCGCAGAGCATTTAATCGATCTGGTAGGCCAACCGCGGCTGGCAAACAGCTGGTGGCCCGGTGCGGTGATTAGCGAAGAGCTGGCAACGGCGGCAGCATTGCGTCAGCAGCAGGCGTTGCTGACACGGCTGGCAGAACAGGGCGCAGATTCCAGCGCCGACGATGCCGCTGCGATTAACGCCTTACGCCAGCAAATTCAGGCGTTGAAAGTGACGGGCAGGCAAAAAATCAATCTTGATCCCGATATCGTCCGCGTTGCCGAACGCGGTAACCCGCCGTTGCAGGGCAACTACACGCTGTGGGTCGGACCACCGCCGTCCACGGTCACGTTGTTCGGGCTTATCAGCCGTCCTGGCAAGCAGCCATTCACTCCAGGTCGCGACGTGGCGAGCTATCTCTCTGACCAGAGCCTGCTCAGCGGTGCGGATCGCAGCTACGCGTGGGTGGTTTACCCGGACGGACGCACGCAAAAAGCGCCGGTGGCTTACTGGAACAAGCGTCACGTAGAGCCGATGCCCGGCAGCATTATTTATGTTGGCCTCGCGGACTCCGTCTGGAGTGAGACGCCTGATGCCCTTAACGCCGACATTCTTCAGACTCTGACGCAGCGGATACCTCAATAA", - "dna_sequence_length": 738, - "functions": [ - "extracellular polysaccharide export OMA protein" - ], - "id": "CDS_3943", - "location": [ - [ - "NC_000913", - 4236897, - "+", - 738 - ] - ], - "md5": "d2cf8d41ef12d1e872874af29da25224", - "parent_gene": "", - "protein_md5": "bf1144a36a9a230e5b4b6bbc941247f3", - "protein_translation": "MIKQTIVALLLSVGASSVFAAGTVKVFSNGSSEAKTLTGAEHLIDLVGQPRLANSWWPGAVISEELATAAALRQQQALLTRLAEQGADSSADDAAAINALRQQIQALKVTGRQKINLDPDIVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQPFTPGRDVASYLSDQSLLSGADRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVGLADSVWSETPDALNADILQTLTQRIPQ", - "protein_translation_length": 245, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32689" - ], - [ - "gene_synonym", - "NP_418453.1" - ], - [ - "gene_synonym", - "JW3989" - ], - [ - "gene_synonym", - "yjbH" - ], - [ - "gene_synonym", - "ASAP:ABE-0013176" - ], - [ - "gene_synonym", - "GeneID:948527" - ], - [ - "gene_synonym", - "b4029" - ], - [ - "gene_synonym", - "GI:16131855" - ], - [ - "gene_synonym", - "EcoGene:EG11926" - ], - [ - "gene_synonym", - "ECK4021" - ] - ], - "dna_sequence": "ATGAAAAAAAGACATCTGCTTAGCTTACTGGCGCTGGGCATTAGCACAGCTTGCTACGGCGAAACATATCCTGCGCCCATTGGTCCGTCGCAGTCGGATTTCGGTGGCGTAGGATTATTACAAACGCCCACCGCGCGTATGGCACGGGAAGGGGAGTTGAGTCTGAACTATCGCGATAACGATCAGTACCGTTATTACTCAGCTTCAGTGCAACTCTTCCCGTGGCTGGAAACAACGCTGCGCTACACCGACGTGCGCACCCGGCAGTACAGCAGCGTCGAAGCGTTCTCTGGCGATCAAACGTATAAAGATAAAGCCTTCGATCTCAAACTGCGTTTGTGGGAAGAGAGTTACTGGCTGCCGCAAGTGGCGGTTGGTGCGCGGGATATCGGCGGTACGGGGCTGTTTGATGCGGAATATCTTGTTGCCAGCAAAGCCTGGGGGCCGTTCGATTTTACGCTCGGCCTGGGCTGGGGGTATTTGGGCACCAGCGGTAATGTGAAAAATCCGCTCTGTTCAGCCAGTGATAAATATTGCTATCGCGATAACAGCTACAAACAGGCGGGATCTATCGACGGTAGCCAGATGTTCCACGGTCCTGCCTCACTGTTTGGCGGCGTGGAATACCAGACGCCCTGGCAACCGCTGCGCCTGAAACTGGAGTATGAAGGCAATAATTATCAGCAGGATTTTGCCGGGAAGCTGGAGCAAAAAAGTAAGTTTAACGTCGGTGCGATTTATCGCGTTACCGATTGGGCCGACGTTAACCTTAGCTATGAACGTGGCAACACCTTTATGTTTGGCGTTACGTTGCGCACCAACTTTAACGATCTGCGCCCGTCTTACAACGATAACGCCCGCCCGCAATATCAACCGCAGCCGCAGGATGCCATTTTGCAGCATTCGGTGGTGGCGAATCAGTTAACGCTGTTGAAATACAATGCCGGACTTGCCGATCCACAGATCCAGGCGAAAGGCGATACGCTGTATGTTACCGGCGAGCAGGTGAAATATCGTGATTCGCGCGAAGGGATCATCCGTGCGAATCGGATCGTGATGAACGATCTGCCGGATGGGATCAAAACGATCCGCATTACGGAAAATCGCCTTAACATGCCGCAGGTGACGACGGAAACCGATGTCGCCAGCCTGAAAAATCATCTCGCCGGAGAGCCGTTGGGCCACGAAACGACGCTGGCGCAAAAACGCGTCGAGCCAGTGGTTCCGCAGTCCACCGAGCAGGGCTGGTATATCGACAAATCACGCTTTGATTTCCATATCGATCCGGTGCTGAACCAGTCGGTCGGTGGCCCGGAAAACTTTTACATGTATCAGCTGGGCGTGATGGGAACGGCAGATTTGTGGCTGACGGACCATCTGCTGACCACCGGCAGCCTGTTTGCAAATCTTGCCAACAACTACGACAAGTTTAACTACACTAATCCTCCGCAGGACTCGCACTTACCGCGCGTGCGTACCCATGTGCGCGAGTATGTGCAGAACGATGTCTATGTGAATAACCTGCAAGCCAACTACTTCCAGCATCTGGGCAACGGCTTCTACGGTCAGGTCTACGGTGGTTATCTCGAAACCATGTTTGGCGGTGCGGGGGCAGAAGTGTTGTATCGCCCGCTGGACAGCAACTGGGCGTTTGGTCTGGATGCCAACTACGTTAAACAGCGCGACTGGCGTAGTGCAAAAGATATGATGAAATTCACCGACTACAGCGTGAAAACCGGACATCTGACCGCCTACTGGACGCCATCTTTCGCTCAGGATGTGTTAGTTAAAGCCAGCGTCGGGCAGTATCTGGCAGGGGATAAAGGCGGCACGCTGGAGATCGCCAAACGCTTTGATAGCGGCGTGGTGGTGGGTGGCTATGCCACGATCACTAATGTTTCGAAAGAGGAGTACGGCGAAGGGGACTTCACCAAAGGCGTGTATGTCTCGGTACCGTTGGATCTCTTCTCGTCTGGCCCGACACGCAGCCGTGCGGCGATTGGCTGGACGCCGCTGACGCGTGACGGTGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAA", 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"MKKRHLLSLLALGISTACYGETYPAPIGPSQSDFGGVGLLQTPTARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTYKDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGYLGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSKFNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNAGLADPQIQAKGDTLYVTGEQVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLAGEPLGHETTLAQKRVEPVVPQSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMGTADLWLTDHLLTTGSLFANLANNYDKFNYTNPPQDSHLPRVRTHVREYVQNDVYVNNLQANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQRDWRSAKDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITNVSKEEYGEGDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGRKFQLYDMTSDRSVNFR", - "protein_translation_length": 698, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:5061528" - ], - [ - "gene_synonym", - "b4620" - ], - [ - "gene_synonym", - "EcoGene:EG14459" - ], - [ - "gene_synonym", - "YP_001165332.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:A5A628" - ], - [ - "gene_synonym", - "ECK4428" - ], - [ - "gene_synonym", - "yjbT" - ], - [ - "gene_synonym", - "GI:145698339" - ] - ], - "dna_sequence": "ATGAAACGTAACCTGATAAAGGTGGTAAAAATGAAGCCTTATTTTGCTGCTTTGATGTTATCAGTCTCTGTTCTTCCTGCTTATGCTGGTCCGCTCGGTACTGCTGATAAAGCCGACCTACCGCAAAGCAATGTCTCCAGCCCAATGATGGCCCAGTCGCTCAGGCAACCAGACCTGCAACCGATATCGACGGACAGGAAGACAGAATGTTTTCGCCTTTACACACCAGATCGCAAACCGGGAGTGAACTGCGTTCCTGATGGCTCGACAGGCCATTAA", - "dna_sequence_length": 279, - "functions": [ - "putative periplasmic protein" - ], - "id": "CDS_3945", - "location": [ - [ - "NC_000913", - 4240055, - "-", - 279 - ] - ], - "md5": "a6db2c3ee25b345f2138e692c7a46f8c", - "parent_gene": "", - "protein_md5": "fbb6498f0e2700d373910bd08ba7709a", - "protein_translation": "MKRNLIKVVKMKPYFAALMLSVSVLPAYAGPLGTADKADLPQSNVSSPMMAQSLRQPDLQPISTDRKTECFRLYTPDRKPGVNCVPDGSTGH", - "protein_translation_length": 92, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "psiE" - ], - [ - "gene_synonym", - "ASAP:ABE-0013187" - ], - [ - "gene_synonym", - "yjbA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7C8" - ], - [ - "gene_synonym", - "EcoGene:EG11209" - ], - [ - "gene_synonym", - "b4030" - ], - [ - "gene_synonym", - "GeneID:948528" - ], - [ - "gene_synonym", - "JW3990" - ], - [ - "gene_synonym", - "ECK4022" - ], - [ - "gene_synonym", - "GI:16131856" - ], - [ - "gene_synonym", - "NP_418454.1" - ] - ], - "dna_sequence": "ATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGTACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACTGGTGGTTTACTTTCTCTATTTCGAATTTATCGCGCTGATTGTGAAGTACTTTCAGTCCGGTTTTCACTTCCCGCTACGTTACTTTGTCTATATTGGGATCACCGCCATTGTGCGCTTGATCATCGTCGATCATAAATCGCCACTGGATGTGTTGATCTACTCGGCTGCGATCCTGTTACTGGTGATCACCCTGTGGCTGTGTAATTCGAAACGGCTGAAGCGGGAGTAA", - "dna_sequence_length": 411, - "functions": [ - "phosphate starvation inducible protein" - ], - "id": "CDS_3946", - "location": [ - [ - "NC_000913", - 4240325, - "+", - 411 - ] - ], - "md5": "879463eea83015b4928cff5961617cda", - "parent_gene": "", - "protein_md5": "60703ed43b255e006d148e32d78d30ea", - "protein_translation": "MTSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLADVLFAPEQTSKYELVEGLVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLIIVDHKSPLDVLIYSAAILLLVITLWLCNSKRLKRE", - "protein_translation_length": 136, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGF4" - ], - [ - "gene_synonym", - "ASAP:ABE-0013189" - ], - [ - "gene_synonym", - "EcoGene:EG11076" - ], - [ - "gene_synonym", - "NP_418455.1" - ], - [ - "gene_synonym", - "GeneID:948529" - ], - [ - "gene_synonym", - "b4031" - ], - [ - "gene_synonym", - "JW3991" - ], - [ - "gene_synonym", - "xylE" - ], - [ - "gene_synonym", - "ECK4023" - ], - [ - "gene_synonym", - "GI:16131857" - ] - ], - "dna_sequence": "ATGAATACCCAGTATAATTCCAGTTATATATTTTCGATTACCTTAGTCGCTACATTAGGTGGTTTATTATTTGGCTACGACACCGCCGTTATTTCCGGTACTGTTGAGTCACTCAATACCGTCTTTGTTGCTCCACAAAACTTAAGTGAATCCGCTGCCAACTCCCTGTTAGGGTTTTGCGTGGCCAGCGCTCTGATTGGTTGCATCATCGGCGGTGCCCTCGGTGGTTATTGCAGTAACCGCTTCGGTCGTCGTGATTCACTTAAGATTGCTGCTGTCCTGTTTTTTATTTCTGGTGTAGGTTCTGCCTGGCCAGAACTTGGTTTTACCTCTATAAACCCGGACAACACTGTGCCTGTTTATCTGGCAGGTTATGTCCCGGAATTTGTTATTTATCGCATTATTGGCGGTATTGGCGTTGGTTTAGCCTCAATGCTCTCGCCAATGTATATTGCGGAACTGGCTCCAGCTCATATTCGCGGGAAACTGGTCTCTTTTAACCAGTTTGCGATTATTTTCGGGCAACTTTTAGTTTACTGCGTAAACTATTTTATTGCCCGTTCCGGTGATGCCAGCTGGCTGAATACTGACGGCTGGCGTTATATGTTTGCCTCGGAATGTATCCCTGCACTGCTGTTCTTAATGCTGCTGTATACCGTGCCAGAAAGTCCTCGCTGGCTGATGTCGCGCGGCAAGCAAGAACAGGCGGAAGGTATCCTGCGCAAAATTATGGGCAACACGCTTGCAACTCAGGCAGTACAGGAAATTAAACACTCCCTGGATCATGGCCGCAAAACCGGTGGTCGTCTGCTGATGTTTGGCGTGGGCGTGATTGTAATCGGCGTAATGCTCTCCATCTTCCAGCAATTTGTCGGCATCAATGTGGTGCTGTACTACGCGCCGGAAGTGTTCAAAACGCTGGGGGCCAGCACGGATATCGCGCTGTTGCAGACCATTATTGTCGGAGTTATCAACCTCACCTTCACCGTTCTGGCAATTATGACGGTGGATAAATTTGGTCGTAAGCCACTGCAAATTATCGGCGCACTCGGAATGGCAATCGGTATGTTTAGCCTCGGTACCGCGTTTTACACTCAGGCACCGGGTATTGTGGCGCTACTGTCGATGCTGTTCTATGTTGCCGCCTTTGCCATGTCCTGGGGTCCGGTATGCTGGGTACTGCTGTCGGAAATCTTCCCGAATGCTATTCGTGGTAAAGCGCTGGCAATCGCGGTGGCGGCCCAGTGGCTGGCGAACTACTTCGTCTCCTGGACCTTCCCGATGATGGACAAAAACTCCTGGCTGGTGGCCCATTTCCACAACGGTTTCTCCTACTGGATTTACGGTTGTATGGGCGTTCTGGCAGCACTGTTTATGTGGAAATTTGTCCCGGAAACCAAAGGTAAAACCCTTGAGGAGCTGGAAGCGCTCTGGGAACCGGAAACGAAGAAAACACAACAAACTGCTACGCTGTAA", - "dna_sequence_length": 1476, - "functions": [ - "D-xylose transporter" - ], - "id": "CDS_3947", - "location": [ - [ - "NC_000913", - 4242254, - "-", - 1476 - ] - ], - "md5": "e9b544860fc391b2d657089f335ae977", - "parent_gene": "", - "protein_md5": "24cf204035ae320475d91045f211b661", - "protein_translation": "MNTQYNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWEPETKKTQQTATL", - "protein_translation_length": 491, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013193" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68183" - ], - [ - "gene_synonym", - "EcoGene:EG10556" - ], - [ - "gene_synonym", - "NP_418456.1" - ], - [ - "gene_synonym", - "GI:16131858" - ], - [ - "gene_synonym", - "malJ" - ], - [ - "gene_synonym", - "b4032" - ], - [ - "gene_synonym", - "GeneID:948530" - ], - [ - "gene_synonym", - "malG" - ], - [ - "gene_synonym", - "ECK4024" - ], - [ - "gene_synonym", - "JW3992" - ] - ], - "dna_sequence": "ATGGCAATGGTCCAACCGAAATCGCAAAAAGCTCGTTTATTTATTACTCACCTGCTACTGCTACTTTTTATCGCAGCGATTATGTTCCCGCTGCTGATGGTCGTCGCTATCTCGCTGCGTCAGGGAAACTTTGCGACCGGCAGCCTGATCCCGGAGCAAATCTCCTGGGATCACTGGAAACTGGCGTTAGGTTTTAGCGTTGAACAGGCTGATGGTCGCATTACGCCACCGCCATTCCCGGTACTGCTGTGGCTGTGGAACTCGGTAAAGGTCGCCGGGATTTCCGCGATTGGCATTGTGGCGCTCTCCACCACCTGCGCCTACGCTTTCGCCCGTATGCGCTTTCCAGGCAAAGCGACGCTGCTGAAAGGAATGCTGATTTTCCAGATGTTCCCGGCAGTACTTTCACTGGTCGCGTTGTATGCGTTGTTTGATCGTCTGGGTGAGTACATTCCATTCATTGGCCTGAATACTCACGGCGGCGTAATTTTCGCGTATCTGGGTGGGATTGCGCTGCATGTCTGGACCATCAAAGGCTATTTCGAAACCATCGACAGTTCGCTGGAAGAAGCTGCTGCGCTGGATGGTGCGACACCGTGGCAGGCCTTCCGCCTTGTCCTGTTGCCGCTGTCAGTACCGATTCTGGCGGTGGTATTCATCCTGTCGTTTATCGCTGCCATTACTGAAGTTCCGGTCGCGTCGCTGTTACTGCGTGACGTAAACAGCTACACCCTGGCCGTGGGGATGCAGCAATACCTCAACCCGCAAAACTACCTGTGGGGTGACTTTGCCGCCGCTGCCGTGATGTCTGCATTACCGATCACCATCGTCTTCTTGCTGGCTCAACGCTGGCTGGTCAACGGCCTGACGGCAGGTGGTGTGAAAGGTTAA", - "dna_sequence_length": 891, - "functions": [ - "maltose transporter subunit" - ], - "id": "CDS_3948", - "location": [ - [ - "NC_000913", - 4243516, - "-", - 891 - ] - ], - "md5": "015937d855eb766898422b51bc5e9a98", - "parent_gene": "", - "protein_md5": "efa68eea5b3ecb8cb067d193aa297e33", - "protein_translation": "MAMVQPKSQKARLFITHLLLLLFIAAIMFPLLMVVAISLRQGNFATGSLIPEQISWDHWKLALGFSVEQADGRITPPPFPVLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFIGLNTHGGVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQNYLWGDFAAAAVMSALPITIVFLLAQRWLVNGLTAGGVKG", - "protein_translation_length": 296, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418457.1" - ], - [ - "gene_synonym", - "JW3993" - ], - [ - "gene_synonym", - "ASAP:ABE-0013195" - ], - [ - "gene_synonym", - "EcoGene:EG10555" - ], - [ - "gene_synonym", - "GI:16131859" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02916" - ], - [ - "gene_synonym", - "malJ" - ], - [ - "gene_synonym", - "b4033" - ], - [ - "gene_synonym", - "malF" - ], - [ - "gene_synonym", - "GeneID:948532" - ], - [ - "gene_synonym", - "ECK4025" - ] - ], - "dna_sequence": "ATGGATGTCATTAAAAAGAAACATTGGTGGCAAAGCGACGCGCTGAAATGGTCAGTGCTAGGTCTGCTCGGCCTGCTGGTGGGTTACCTTGTTGTTTTAATGTACGCACAAGGGGAATACCTGTTCGCCATTACCACGCTGATATTGAGTTCAGCGGGGCTGTATATTTTCGCCAATCGTAAAGCCTACGCCTGGCGCTATGTTTACCCGGGAATGGCTGGAATGGGATTATTCGTCCTCTTCCCTCTGGTCTGCACCATCGCCATTGCCTTCACCAACTACAGCAGCACTAACCAGCTGACTTTTGAACGTGCGCAGGAAGTGTTGTTAGATCGCTCCTGGCAAGCAGGCAAAACCTATAACTTTGGTCTTTACCCGGCGGGCGATGAGTGGCAACTGGCGCTCAGCGACGGCGAAACCGGCAAAAATTACCTCTCCGACGCTTTTAAATTTGGCGGCGAGCAAAAACTGCAACTGAAAGAAACGACCGCCCAGCCCGAAGGCGAACGCGCGAATCTGCGCGTGATTACCCAGAATCGTCAGGCGCTGAGTGACATTACCGCCATTCTGCCGGATGGCAACAAAGTGATGATGAGCTCCCTGCGCCAGTTTTCTGGCACGCAGCCGCTCTACACACTCGACGGTGACGGCACGTTGACGAATAATCAGAGCGGCGTGAAATATCGTCCGAATAACCAAATTGGCTTTTACCAGTCCATTACCGCCGACGGCAACTGGGGTGATGAAAAGCTAAGCCCCGGTTACACCGTGACCACCGGCTGGAAAAACTTTACCCGCGTCTTTACCGACGAAGGCATTCAGAAACCGTTCCTCGCCATTTTCGTCTGGACCGTGGTGTTCTCGCTGATCACTGTCTTTTTAACGGTGGCGGTCGGCATGGTTCTGGCGTGTCTGGTGCAGTGGGAAGCGTTGCGCGGCAAAGCGGTCTATCGCGTCCTGCTGATTCTGCCCTACGCGGTGCCATCGTTCATTTCAATCTTGATTTTCAAAGGGTTGTTTAACCAGAGCTTCGGTGAAATCAACATGATGTTGAGCGCGCTGTTTGGCGTGAAGCCCGCCTGGTTCAGCGATCCGACCACCGCCCGCACGATGCTAATTATCGTCAATACCTGGCTGGGTTATCCGTACATGATGATCCTCTGCATGGGCTTGCTGAAAGCGATTCCGGACGATTTGTATGAAGCCTCAGCAATGGATGGCGCAGGTCCGTTCCAGAACTTCTTTAAGATTACGCTGCCGCTGCTGATTAAACCGCTGACGCCGCTGATGATCGCCAGCTTCGCCTTTAACTTTAACAACTTCGTGCTGATTCAACTGTTAACCAACGGCGGCCCGGATCGTCTTGGCACGACCACGCCAGCCGGTTATACCGACCTGCTTGTTAACTACACCTACCGCATCGCTTTTGAAGGCGGCGGGGGTCAGGACTTCGGTCTGGCGGCAGCAATTGCCACGCTGATCTTCCTGCTGGTGGGTGCGCTGGCGATAGTGAACCTGAAAGCCACGCGAATGAAGTTTGATTAA", - "dna_sequence_length": 1545, - "functions": [ - "maltose transporter subunit" - ], - "id": "CDS_3949", - "location": [ - [ - "NC_000913", - 4245075, - "-", - 1545 - ] - ], - "md5": "18271a54f4feda7993ffb09fd3e065d6", - "parent_gene": "", - "protein_md5": "faf622c364636b73271ca43697fcd8d1", - "protein_translation": "MDVIKKKHWWQSDALKWSVLGLLGLLVGYLVVLMYAQGEYLFAITTLILSSAGLYIFANRKAYAWRYVYPGMAGMGLFVLFPLVCTIAIAFTNYSSTNQLTFERAQEVLLDRSWQAGKTYNFGLYPAGDEWQLALSDGETGKNYLSDAFKFGGEQKLQLKETTAQPEGERANLRVITQNRQALSDITAILPDGNKVMMSSLRQFSGTQPLYTLDGDGTLTNNQSGVKYRPNNQIGFYQSITADGNWGDEKLSPGYTVTTGWKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAIVNLKATRMKFD", - "protein_translation_length": 514, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418458.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013200" - ], - [ - "gene_synonym", - "EcoGene:EG10554" - ], - [ - "gene_synonym", - "GeneID:948538" - ], - [ - "gene_synonym", - "b4034" - ], - [ - "gene_synonym", - "malJ" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEX9" - ], - [ - "gene_synonym", - "ECK4026" - ], - [ - "gene_synonym", - "malE" - ], - [ - "gene_synonym", - "JW3994" - ], - [ - "gene_synonym", - "GI:16131860" - ] - ], - "dna_sequence": "ATGAAAATAAAAACAGGTGCACGCATCCTCGCATTATCCGCATTAACGACGATGATGTTTTCCGCCTCGGCTCTCGCCAAAATCGAAGAAGGTAAACTGGTAATCTGGATTAACGGCGATAAAGGCTATAACGGTCTCGCTGAAGTCGGTAAGAAATTCGAGAAAGATACCGGAATTAAAGTCACCGTTGAGCATCCGGATAAACTGGAAGAGAAATTCCCACAGGTTGCGGCAACTGGCGATGGCCCTGACATTATCTTCTGGGCACACGACCGCTTTGGTGGCTACGCTCAATCTGGCCTGTTGGCTGAAATCACCCCGGACAAAGCGTTCCAGGACAAGCTGTATCCGTTTACCTGGGATGCCGTACGTTACAACGGCAAGCTGATTGCTTACCCGATCGCTGTTGAAGCGTTATCGCTGATTTATAACAAAGATCTGCTGCCGAACCCGCCAAAAACCTGGGAAGAGATCCCGGCGCTGGATAAAGAACTGAAAGCGAAAGGTAAGAGCGCGCTGATGTTCAACCTGCAAGAACCGTACTTCACCTGGCCGCTGATTGCTGCTGACGGGGGTTATGCGTTCAAGTATGAAAACGGCAAGTACGACATTAAAGACGTGGGCGTGGATAACGCTGGCGCGAAAGCGGGTCTGACCTTCCTGGTTGACCTGATTAAAAACAAACACATGAATGCAGACACCGATTACTCCATCGCAGAAGCTGCCTTTAATAAAGGCGAAACAGCGATGACCATCAACGGCCCGTGGGCATGGTCCAACATCGACACCAGCAAAGTGAATTATGGTGTAACGGTACTGCCGACCTTCAAGGGTCAACCATCCAAACCGTTCGTTGGCGTGCTGAGCGCAGGTATTAACGCCGCCAGTCCGAACAAAGAGCTGGCGAAAGAGTTCCTCGAAAACTATCTGCTGACTGATGAAGGTCTGGAAGCGGTTAATAAAGACAAACCGCTGGGTGCCGTAGCGCTGAAGTCTTACGAGGAAGAGTTGGCGAAAGATCCACGTATTGCCGCCACCATGGAAAACGCCCAGAAAGGTGAAATCATGCCGAACATCCCGCAGATGTCCGCTTTCTGGTATGCCGTGCGTACTGCGGTGATCAACGCCGCCAGCGGTCGTCAGACTGTCGATGAAGCCCTGAAAGACGCGCAGACTCGTATCACCAAGTAA", - "dna_sequence_length": 1191, - "functions": [ - "maltose transporter subunit" - ], - "id": "CDS_3950", - "location": [ - [ - "NC_000913", - 4246419, - "-", - 1191 - ] - ], - "md5": "e2290175daa6bb95ba895c1d642ee325", - "parent_gene": "", - "protein_md5": "cce42a1bc3dba537c63b008bbf8fb026", - "protein_translation": "MKIKTGARILALSALTTMMFSASALAKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTRITK", - "protein_translation_length": 396, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68187" - ], - [ - "gene_synonym", - "NP_418459.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013216" - ], - [ - "gene_synonym", - "b4035" - ], - [ - "gene_synonym", - "malK" - ], - [ - "gene_synonym", - "ECK4027" - ], - [ - "gene_synonym", - "GeneID:948537" - ], - [ - "gene_synonym", - "GI:16131861" - ], - [ - "gene_synonym", - "JW3995" - ], - [ - "gene_synonym", - "EcoGene:EG10558" - ] - ], - "dna_sequence": "ATGGCGAGCGTACAGCTGCAAAATGTAACGAAAGCCTGGGGCGAGGTCGTGGTATCGAAAGATATCAATCTCGATATCCATGAAGGTGAATTCGTGGTGTTTGTCGGACCGTCTGGCTGCGGTAAATCGACTTTACTGCGCATGATTGCCGGGCTTGAGACGATCACCAGCGGCGACCTGTTCATCGGTGAGAAACGGATGAATGACACTCCGCCAGCAGAACGCGGCGTTGGTATGGTGTTTCAGTCTTACGCGCTCTATCCCCACCTGTCAGTAGCAGAAAACATGTCATTTGGCCTGAAACTGGCTGGCGCAAAAAAAGAGGTGATTAACCAACGCGTTAACCAGGTGGCGGAAGTGCTACAACTGGCGCATTTGCTGGATCGCAAACCGAAAGCGCTCTCCGGTGGTCAGCGTCAGCGTGTGGCGATTGGCCGTACGCTGGTGGCCGAGCCAAGCGTATTTTTGCTCGATGAACCGCTCTCCAACCTCGATGCTGCACTGCGTGTGCAAATGCGTATCGAAATCTCCCGTCTGCATAAACGCCTGGGCCGCACAATGATTTACGTCACCCACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATGTCGCTGGGTATTCGCCCGGAACATCTACTGCCGAGTGATATCGCTGACGTCATCCTTGAGGGTGAAGTTCAGGTCGTCGAGCAACTCGGCAACGAAACTCAAATCCATATCCAGATCCCTTCCATTCGTCAAAACCTGGTGTACCGCCAGAACGACGTGGTGTTGGTAGAAGAAGGTGCCACATTCGCTATCGGCCTGCCGCCAGAGCGTTGCCATCTGTTCCGTGAGGATGGCACTGCATGTCGTCGACTGCATAAGGAGCCGGGCGTTTAA", - "dna_sequence_length": 1116, - "functions": [ - "maltose ABC transportor ATPase" - ], - "id": "CDS_3951", - "location": [ - [ - "NC_000913", - 4246784, - "+", - 1116 - ] - ], - "md5": "ad751332daacfbd03ef9f82df6d580af", - "parent_gene": "", - "protein_md5": "599aa7bb9acb7c8383cd6e9a94258fbf", - "protein_translation": "MASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMNFLPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHLLPSDIADVILEGEVQVVEQLGNETQIHIQIPSIRQNLVYRQNDVVLVEEGATFAIGLPPERCHLFREDGTACRRLHKEPGV", - "protein_translation_length": 371, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "lamB" - ], - [ - "gene_synonym", - "ASAP:ABE-0013218" - ], - [ - "gene_synonym", - "EcoGene:EG10528" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02943" - ], - [ - "gene_synonym", - "b4036" - ], - [ - "gene_synonym", - "malL" - ], - [ - "gene_synonym", - "ECK4028" - ], - [ - "gene_synonym", - "GeneID:948548" - ], - [ - "gene_synonym", - "NP_418460.1" - ], - [ - "gene_synonym", - "malB" - ], - [ - "gene_synonym", - "JW3996" - ], - [ - "gene_synonym", - "GI:16131862" - ] - ], - "dna_sequence": "ATGATGATTACTCTGCGCAAACTTCCTCTGGCGGTTGCCGTCGCAGCGGGCGTAATGTCTGCTCAGGCAATGGCTGTTGATTTCCACGGCTATGCACGTTCCGGTATTGGTTGGACAGGTAGCGGCGGTGAACAACAGTGTTTCCAGACTACCGGTGCTCAAAGTAAATACCGTCTTGGCAACGAATGTGAAACTTATGCTGAATTAAAATTGGGTCAGGAAGTGTGGAAAGAGGGCGATAAGAGCTTCTATTTCGACACTAACGTGGCCTATTCCGTCGCACAACAGAATGACTGGGAAGCTACCGATCCGGCCTTCCGTGAAGCAAACGTGCAGGGTAAAAACCTGATCGAATGGCTGCCAGGCTCCACCATCTGGGCAGGTAAGCGCTTCTACCAACGTCATGACGTTCATATGATCGACTTCTACTACTGGGATATTTCTGGTCCTGGTGCCGGTCTGGAAAACATCGATGTTGGCTTCGGTAAACTCTCTCTGGCAGCAACCCGCTCCTCTGAAGCTGGTGGTTCTTCCTCTTTCGCCAGCAACAATATTTATGACTATACCAACGAAACCGCGAACGACGTTTTCGATGTGCGTTTAGCGCAGATGGAAATCAACCCGGGCGGCACATTAGAACTGGGTGTCGACTACGGTCGTGCCAACTTGCGTGATAACTATCGTCTGGTTGATGGCGCATCGAAAGACGGCTGGTTATTCACTGCTGAACATACTCAGAGTGTCCTGAAGGGCTTTAACAAGTTTGTTGTTCAGTACGCTACTGACTCGATGACCTCGCAGGGTAAAGGGCTGTCGCAGGGTTCTGGCGTTGCATTTGATAACGAAAAATTTGCCTACAATATCAACAACAACGGTCACATGCTGCGTATCCTCGACCACGGTGCGATCTCCATGGGCGACAACTGGGACATGATGTACGTGGGTATGTACCAGGATATCAACTGGGATAACGACAACGGCACCAAGTGGTGGACCGTCGGTATTCGCCCGATGTACAAGTGGACGCCAATCATGAGCACCGTGATGGAAATCGGCTACGACAACGTCGAATCCCAGCGCACCGGCGACAAGAACAATCAGTACAAAATTACCCTCGCACAACAATGGCAGGCTGGCGACAGCATCTGGTCACGCCCGGCTATTCGTGTCTTCGCAACCTACGCCAAGTGGGATGAGAAATGGGGTTACGACTACACCGGTAACGCTGATAACAACGCGAACTTCGGCAAAGCCGTTCCTGCTGATTTCAACGGCGGCAGCTTCGGTCGTGGCGACAGCGACGAGTGGACCTTCGGTGCCCAGATGGAAATCTGGTGGTAA", - "dna_sequence_length": 1341, - "functions": [ - "maltose outer membrane porin (maltoporin)" - ], - "id": "CDS_3952", - "location": [ - [ - "NC_000913", - 4247971, - "+", - 1341 - ] - ], - "md5": "fed7c5e3256353d87f155adccbad6a4e", - "parent_gene": "", - "protein_md5": "c93c8f314eb2a28915971d9ae89a9ac9", - "protein_translation": "MMITLRKLPLAVAVAAGVMSAQAMAVDFHGYARSGIGWTGSGGEQQCFQTTGAQSKYRLGNECETYAELKLGQEVWKEGDKSFYFDTNVAYSVAQQNDWEATDPAFREANVQGKNLIEWLPGSTIWAGKRFYQRHDVHMIDFYYWDISGPGAGLENIDVGFGKLSLAATRSSEAGGSSSFASNNIYDYTNETANDVFDVRLAQMEINPGGTLELGVDYGRANLRDNYRLVDGASKDGWLFTAEHTQSVLKGFNKFVVQYATDSMTSQGKGLSQGSGVAFDNEKFAYNINNNGHMLRILDHGAISMGDNWDMMYVGMYQDINWDNDNGTKWWTVGIRPMYKWTPIMSTVMEIGYDNVESQRTGDKNNQYKITLAQQWQAGDSIWSRPAIRVFATYAKWDEKWGYDYTGNADNNANFGKAVPADFNGGSFGRGDSDEWTFGAQMEIWW", - "protein_translation_length": 446, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013221" - ], - [ - "gene_synonym", - "NP_418461.1" - ], - [ - "gene_synonym", - "GeneID:948547" - ], - [ - "gene_synonym", - "EcoGene:EG10559" - ], - [ - "gene_synonym", - "b4037" - ], - [ - "gene_synonym", - "malM" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03841" - ], - [ - "gene_synonym", - "ECK4029" - ], - [ - "gene_synonym", - "molA" - ], - [ - "gene_synonym", - "GI:16131863" - ], - [ - "gene_synonym", - "JW3997" - ] - ], - "dna_sequence": "ATGAAAATGAATAAAAGTCTCATCGTCCTCTGTTTATCAGCAGGGTTACTGGCAAGCGCGCCTGGAATTAGCCTTGCCGATGTTAACTACGTACCGCAAAACACCAGCGACGCGCCAGCCATTCCATCTGCTGCGCTGCAACAACTCACCTGGACACCGGTCGATCAATCTAAAACCCAGACCACCCAACTGGCGACCGGCGGCCAACAACTGAACGTTCCCGGCATCAGTGGTCCGGTTGCTGCGTACAGCGTCCCGGCAAACATTGGCGAACTGACCCTGACGCTGACCAGCGAAGTGAACAAACAAACCAGCGTTTTTGCGCCGAACGTGCTGATTCTTGATCAGAACATGACCCCATCAGCCTTCTTCCCCAGCAGTTATTTCACCTACCAGGAACCAGGCGTGATGAGTGCAGATCGGCTGGAAGGCGTTATGCGCCTGACACCGGCGTTGGGGCAGCAAAAACTTTATGTTCTGGTCTTTACCACGGAAAAAGATCTCCAGCAGACGACCCAACTGCTCGACCCGGCTAAAGCCTATGCCAAGGGCGTCGGTAACTCGATCCCGGATATCCCCGATCCGGTTGCTCGTCATACCACCGATGGCTTACTGAAACTGAAAGTGAAAACGAACTCCAGCTCCAGCGTGTTGGTAGGACCTTTATTTGGTTCTTCCGCTCCAGCTCCGGTTACGGTAGGTAACACGGCGGCACCAGCTGTGGCTGCACCCGCTCCGGCACCGGTGAAGAAAAGCGAGCCGATGCTCAACGACACGGAAAGTTATTTTAATACCGCGATCAAAAACGCTGTCGCGAAAGGTGATGTTGATAAGGCGTTAAAACTGCTTGATGAAGCTGAACGCCTGGGATCGACATCTGCCCGTTCCACCTTTATCAGCAGTGTAAAAGGCAAGGGGTAA", - "dna_sequence_length": 921, - "functions": [ - "maltose regulon periplasmic protein" - ], - "id": "CDS_3953", - "location": [ - [ - "NC_000913", - 4249554, - "+", - 921 - ] - ], - "md5": "482ab5b2c1bc0218dd2eec0f60733e60", - "parent_gene": "", - "protein_md5": "4b32077a00c6eb3753e64fe6969d58fb", - "protein_translation": "MKMNKSLIVLCLSAGLLASAPGISLADVNYVPQNTSDAPAIPSAALQQLTWTPVDQSKTQTTQLATGGQQLNVPGISGPVAAYSVPANIGELTLTLTSEVNKQTSVFAPNVLILDQNMTPSAFFPSSYFTYQEPGVMSADRLEGVMRLTPALGQQKLYVLVFTTEKDLQQTTQLLDPAKAYAKGVGNSIPDIPDPVARHTTDGLLKLKVKTNSSSSVLVGPLFGSSAPAPVTVGNTAAPAVAAPAPAPVKKSEPMLNDTESYFNTAIKNAVAKGDVDKALKLLDEAERLGSTSARSTFISSVKGKG", - "protein_translation_length": 306, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013224" - ], - [ - "gene_synonym", - "GeneID:948546" - ], - [ - "gene_synonym", - "yjbI" - ], - [ - "gene_synonym", - "JW3998" - ], - [ - "gene_synonym", - "ECK4030" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32690" - ], - [ - "gene_synonym", - "b4038" - ], - [ - "gene_synonym", - "EcoGene:EG11927" - ] - ], - "dna_sequence": "ATGATAAGTCATATCCTAAATTCTGGCGGCAATAACTCTTTGATGAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGATTTACTACGTAATTTAAATGGGGTGCCAGGTTTAAACAGAGATAACTTTATTTATATCAGCAATATTTTTTCAAATATAAAACAACGGAACGAAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATCAGTAATGATACTATAAGTGTAAAATTCTACAGAAATGAAAAAATTGAATGCGCTTGCAATTTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTTAACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAATGTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATCATTTATTAAATCGAATTTGACAGCTGTTATGTTTGATTATGTGCGAATGTCGACAGGGAATTTTAAAGATTGCATTACAGAACAATTGGAATTAACTATTGATTATTCAGATATATTTTGGAATGAAGATCTCGATGGTTATATCAATAACATTATAAAAATGATTGATACATTGCCAGATAATGCAATGATATTGAAATCCGTTCTGGCCGTAAAACTGGTGATGCAATTAAAAATACTTAATATTGTTAATAAAAACTTTATTGAGAATATGAAGAAAATATTTAGCCATTGTCCTTATATAAAAGATCCCATTATACGCAGTTATATCCATTCTGATGAAGATAACAAGTTCGATGATTTTATGCGTCAACATCGATTCAGTGAGGTGAATTTCGATACCCAACAGATGATCGATTTTATTAACAGATTTAATACGAATAAATGGCTAATTGATAAAAATAACAATTTTTTTATCCAACTTATCGATCAGGCCTTACGATCAACGGATGATATGATCAAAGCAAATGTTTGGCATCTTTATAAAGAGTGGATTCGTAGTGATGATGTTTCACCTATATTTATAGAAACTGAAGATAATTTAAGAACCTTTAACACGAATGAATTAACACGAAACGATAATATCTTTATCCTGTTCTCCTCAGTCGATGATGGGCCAGTTATGGTGGTAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGACATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTTTTCAGCTCCAAATCTCATGGTAAATATGCGCTTTTCCCCATTTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAA", 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"NP_418463.4" - ], - [ - "gene_synonym", - "JW5713" - ], - [ - "gene_synonym", - "GeneID:948545" - ], - [ - "gene_synonym", - "ASAP:ABE-0013227" - ], - [ - "gene_synonym", - "GI:90111677" - ], - [ - "gene_synonym", - "ECK4031" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P26602" - ], - [ - "gene_synonym", - "EcoGene:EG11369" - ], - [ - "gene_synonym", - "b4039" - ], - [ - "gene_synonym", - "ubiC" - ], - [ - "gene_synonym", - "sdgG?" - ] - ], - "dna_sequence": "ATGTCACACCCCGCGTTAACGCAACTGCGTGCGCTGCGCTATTGTAAAGAGATCCCTGCCCTGGATCCGCAACTGCTCGACTGGCTGTTGCTGGAGGATTCCATGACAAAACGTTTTGAACAGCAGGGAAAAACGGTAAGCGTGACGATGATCCGCGAAGGGTTTGTCGAGCAGAATGAAATCCCCGAAGAACTGCCGCTGCTGCCGAAAGAGTCTCGTTACTGGTTACGTGAAATTTTGTTATGTGCCGATGGTGAACCGTGGCTTGCCGGTCGTACCGTCGTTCCTGTGTCAACGTTAAGCGGGCCGGAGCTGGCGTTACAAAAATTGGGTAAAACGCCGTTAGGACGCTATCTGTTCACATCATCGACATTAACCCGGGACTTTATTGAGATAGGCCGTGATGCCGGGCTGTGGGGGCGACGTTCCCGCCTGCGATTAAGCGGTAAACCGCTGTTGCTAACAGAACTGTTTTTACCGGCGTCACCGTTGTACTAA", - "dna_sequence_length": 498, - "functions": [ - "chorismate--pyruvate lyase" - ], - "id": "CDS_3955", - "location": [ - [ - "NC_000913", - 4252506, - "+", - 498 - ] - ], - "md5": "a47ca6916013c4fbcc21e3e93908adb6", - "parent_gene": "", - "protein_md5": "ce859521c2918e06100a38b51c5b9506", - "protein_translation": "MSHPALTQLRALRYCKEIPALDPQLLDWLLLEDSMTKRFEQQGKTVSVTMIREGFVEQNEIPEELPLLPKESRYWLREILLCADGEPWLAGRTVVPVSTLSGPELALQKLGKTPLGRYLFTSSTLTRDFIEIGRDAGLWGRRSRLRLSGKPLLLTELFLPASPLY", - "protein_translation_length": 165, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "cyr" - ], - [ - "gene_synonym", - "JW4000" - ], - [ - "gene_synonym", - "NP_418464.1" - ], - [ - "gene_synonym", - "b4040" - ], - [ - "gene_synonym", - "ASAP:ABE-0013229" - ], - [ - "gene_synonym", - "EcoGene:EG11370" - ], - [ - "gene_synonym", - "GeneID:948540" - ], - [ - "gene_synonym", - "ECK4032" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGK1" - ], - [ - "gene_synonym", - "ubiA" - ], - [ - "gene_synonym", - "GI:16131866" - ], - [ - "gene_synonym", - "sdgG?" - ] - ], - "dna_sequence": "ATGGAGTGGAGTCTGACGCAGAATAAGCTGCTGGCGTTTCATCGCTTAATGCGTACGGATAAGCCAATTGGCGCGTTACTGCTGCTCTGGCCAACATTATGGGCGTTGTGGGTGGCGACACCGGGCGTTCCCCAGCTCTGGATCCTGGCGGTGTTTGTCGCGGGTGTCTGGCTGATGCGCGCTGCCGGATGTGTGGTGAATGATTATGCTGACCGCAAGTTTGATGGTCATGTTAAGCGCACGGCGAACCGACCACTTCCCAGCGGCGCGGTAACAGAGAAAGAGGCGCGCGCGCTGTTTGTCGTGCTGGTACTGATTTCGTTTTTACTGGTGCTGACGCTGAATACGATGACCATTCTGTTGTCGATTGCCGCGCTAGCGCTGGCGTGGGTGTACCCGTTTATGAAGCGGTATACCCATCTACCGCAAGTGGTGCTGGGCGCGGCGTTTGGCTGGTCGATTCCAATGGCTTTTGCCGCTGTGAGTGAGTCGGTGCCATTGAGTTGCTGGTTAATGTTCCTCGCCAATATTCTCTGGGCGGTGGCTTACGACACGCAGTATGCGATGGTTGACCGCGATGATGATGTGAAGATTGGCATTAAATCCACGGCAATCCTGTTCGGCCAATACGATAAATTGATTATTGGTATTTTGCAGATTGGCGTACTGGCACTGATGGCGATCATCGGTGAGTTAAATGGCTTAGGCTGGGGATATTACTGGTCAATTCTGGTGGCTGGCGCGCTGTTTGTTTATCAACAAAAACTGATTGCCAACCGCGAGCGTGAAGCCTGCTTTAAAGCATTTATGAATAATAACTATGTTGGTCTGGTACTATTTTTAGGGCTGGCAATGAGTTACTGGCATTTCTGA", - "dna_sequence_length": 873, - "functions": [ - "p-hydroxybenzoate octaprenyltransferase" - ], - "id": "CDS_3956", - "location": [ - [ - "NC_000913", - 4253016, - "+", - 873 - ] - ], - "md5": "f44500b5062d0586d51654c5c9696821", - "parent_gene": "", - "protein_md5": "3b188c398a3baedb4551e575bd27bb0b", - "protein_translation": "MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVPQLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVVLVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAAVSESVPLSCWLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGILQIGVLALMAIIGELNGLGWGYYWSILVAGALFVYQQKLIANREREACFKAFMNNNYVGLVLFLGLAMSYWHF", - "protein_translation_length": 290, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111678" - ], - [ - "gene_synonym", - "ASAP:ABE-0013232" - ], - [ - "gene_synonym", - "JW4001" - ], - [ - "gene_synonym", - "NP_418465.4" - ], - [ - "gene_synonym", - "b4041" - ], - [ - "gene_synonym", - "EcoGene:EG10740" - ], - [ - "gene_synonym", - "GeneID:948541" - ], - [ - "gene_synonym", - "ECK4033" - ], - [ - "gene_synonym", - "plsB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7A7" - ] - ], - "dna_sequence": "ATGTCCGGCTGGCCACGAATTTACTACAAATTACTGAATTTACCATTAAGCATCCTGGTAAAAAGCAAGTCTATTCCGGCAGATCCTGCCCCGGAACTGGGGCTGGATACCTCTCGTCCAATTATGTACGTTTTACCGTACAACTCGAAAGCAGATTTGCTGACGTTGCGCGCCCAGTGTCTGGCACATGACTTGCCTGACCCGTTAGAGCCGCTGGAAATCGACGGCACGCTACTGCCGCGCTATGTGTTCATTCACGGCGGGCCGCGTGTGTTCACCTATTACACGCCGAAAGAAGAGTCTATTAAGCTGTTCCACGACTATCTCGATTTGCACCGTAGCAACCCAAATCTGGATGTGCAGATGGTGCCAGTGTCGGTGATGTTTGGTCGCGCGCCGGGGCGTGAAAAAGGCGAAGTGAACCCGCCGCTGCGTATGCTTAACGGCGTACAGAAATTTTTCGCTGTACTGTGGCTCGGTCGCGACAGTTTTGTGCGTTTCTCGCCGTCAGTTTCGCTGCGCCGTATGGCGGATGAACACGGCACGGATAAAACTATCGCTCAGAAACTGGCGCGCGTGGCGCGTATGCACTTTGCCCGTCAACGTCTGGCTGCCGTAGGCCCACGTTTGCCTGCTCGTCAGGATCTGTTTAATAAGCTGCTCGCCTCCCGCGCCATTGCCAAAGCGGTAGAAGATGAAGCGCGCAGCAAAAAAATCTCCCATGAAAAAGCGCAGCAGAACGCGATTGCACTGATGGAAGAGATTGCGGCGAATTTCTCTTACGAGATGATTCGCCTGACTGACCGTATTCTGGGCTTCACCTGGAACCGACTTTACCAGGGCATCAACGTCCATAACGCTGAGCGCGTTCGCCAGCTGGCCCACGACGGTCATGAGCTGGTATATGTGCCTTGCCACCGCAGTCACATGGACTACCTGCTGCTTTCTTACGTGCTGTATCACCAGGGGCTGGTGCCGCCGCATATCGCCGCCGGGATCAACCTGAATTTCTGGCCTGCCGGGCCGATTTTCCGCCGTCTGGGGGCGTTCTTTATTCGCCGTACGTTTAAAGGCAATAAACTTTATTCCACCGTTTTCCGGGAGTATCTCGGCGAACTGTTCAGCCGTGGTTATTCCGTCGAGTACTTCGTGGAAGGCGGTCGTTCCCGTACGGGGCGTTTGCTGGATCCGAAAACTGGTACGCTGTCGATGACCATTCAGGCGATGCTGCGTGGCGGCACGCGTCCGATTACGCTGATTCCGATCTATATCGGTTATGAGCACGTCATGGAAGTGGGTACTTACGCCAAAGAACTGCGCGGCGCGACGAAAGAGAAAGAGAGCCTGCCGCAGATGCTGCGCGGTTTAAGCAAGCTGCGTAATCTCGGTCAGGGTTACGTCAACTTCGGTGAACCAATGCCGTTGATGACCTACCTTAACCAGCATGTACCTGACTGGCGTGAATCTATCGATCCCATCGAAGCGGTGCGTCCGGCATGGTTAACGCCGACGGTCAATAATATTGCTGCCGATCTGATGGTACGCATTAACAACGCAGGCGCGGCAAACGCCATGAACCTGTGCTGTACTGCGCTACTGGCATCACGTCAGCGCTCACTCACCCGCGAGCAGTTAACCGAGCAACTCAACTGCTACCTGGATCTGATGCGCAACGTGCCCTACTCCACGGACTCTACCGTTCCTTCAGCCAGCGCCAGCGAGCTTATCGATCACGCGCTGCAAATGAACAAGTTTGAAGTCGAGAAAGACACAATCGGCGACATCATCATTCTGCCGCGCGAGCAAGCGGTGCTGATGACCTACTATCGCAACAACATTGCGCATATGTTGGTGCTGCCTTCGCTGATGGCGGCAATCGTCACCCAGCATCGCCACATCTCCCGCGACGTATTGATGGAGCACGTCAATGTGCTTTACCCAATGCTGAAAGCGGAGCTGTTCCTGCGCTGGGATCGCGACGAGTTGCCGGACGTTATTGATGCGCTGGCAAATGAGATGCAACGTCAGGGGCTGATTACCCTGCAAGATGATGAGTTGCATATCAACCCGGCGCATTCTCGCACGCTACAGCTGCTGGCCGCAGGCGCGCGCGAAACGCTGCAACGTTATGCCATCACCTTCTGGTTGTTGAGTGCCAACCCGTCGATCAACCGCGGTACGCTGGAGAAAGAGAGCCGCACCGTCGCGCAACGTCTCTCCGTGCTGCACGGCATCAACGCGCCGGAGTTCTTCGACAAGGCGGTGTTCAGTTCTCTGGTGCTGACACTGCGTGATGAAGGGTATATCAGCGATAGCGGCGATGCCGAACCGGCAGAAACGATGAAGGTTTATCAGTTGCTGGCGGAGTTGATTACATCAGACGTGCGTTTGACGATTGAGAGTGCGACGCAGGGCGAAGGGTAA", 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"MSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYVLPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEESIKLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLGRDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFNKLLASRAIAKAVEDEARSKKISHEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWNRLYQGINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTGRLLDPKTGTLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLPQMLRGLSKLRNLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNIAADLMVRINNAGAANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVPYSTDSTVPSASASELIDHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMAAIVTQHRHISRDVLMEHVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQDDELHINPAHSRTLQLLAAGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLSVLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLTIESATQGEG", - "protein_translation_length": 807, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW4002" - ], - [ - "gene_synonym", - "b4042" - ], - [ - "gene_synonym", - "ASAP:ABE-0013235" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABN1" - ], - [ - "gene_synonym", - "GeneID:948543" - ], - [ - "gene_synonym", - "NP_418466.1" - ], - [ - "gene_synonym", - "GI:16131868" - ], - [ - "gene_synonym", - "EcoGene:EG10224" - ], - [ - "gene_synonym", - "dgkA" - ], - [ - "gene_synonym", - "ECK4034" - ] - ], - "dna_sequence": "ATGGCCAATAATACCACTGGATTCACCCGAATTATCAAAGCTGCTGGCTATTCCTGGAAAGGTTTACGCGCTGCATGGATCAACGAAGCGGCATTCCGTCAGGAAGGCGTAGCGGTATTGTTGGCGGTGGTCATCGCCTGCTGGCTGGATGTGGACGCGATTACCCGCGTGCTGCTTATCAGCTCCGTGATGCTGGTGATGATTGTGGAAATCCTCAATAGCGCCATCGAAGCAGTGGTTGACCGAATTGGCTCTGAATACCATGAGCTTTCCGGACGCGCAAAAGATATGGGATCCGCTGCGGTGCTGATTGCCATTATCGTCGCCGTGATTACCTGGTGCATTCTGTTATGGTCGCATTTTGGATAA", - "dna_sequence_length": 369, - "functions": [ - "diacylglycerol kinase" - ], - "id": "CDS_3958", - "location": [ - [ - "NC_000913", - 4256637, - "+", - 369 - ] - ], - "md5": "adc1ec58278945d53d60ee018e0a121b", - "parent_gene": "", - "protein_md5": "93f682dc56900629d70acf47473a6500", - "protein_translation": "MANNTTGFTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVVIACWLDVDAITRVLLISSVMLVMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAVLIAIIVAVITWCILLWSHFG", - "protein_translation_length": 122, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "exrA" - ], - [ - "gene_synonym", - "JW4003" - ], - [ - "gene_synonym", - "tsl" - ], - [ - "gene_synonym", - "b4043" - ], - [ - "gene_synonym", - "GeneID:948544" - ], - [ - "gene_synonym", - "spr" - ], - [ - "gene_synonym", - "EcoGene:EG10533" - ], - [ - "gene_synonym", - "umuA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7C2" - ], - [ - "gene_synonym", - "GI:16131869" - ], - [ - "gene_synonym", - "NP_418467.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013241" - ], - [ - "gene_synonym", - "ECK4035" - ], - [ - "gene_synonym", - "lexA" - ] - ], - "dna_sequence": "ATGAAAGCGTTAACGGCCAGGCAACAAGAGGTGTTTGATCTCATCCGTGATCACATCAGCCAGACAGGTATGCCGCCGACGCGTGCGGAAATCGCGCAGCGTTTGGGGTTCCGTTCCCCAAACGCGGCTGAAGAACATCTGAAGGCGCTGGCACGCAAAGGCGTTATTGAAATTGTTTCCGGCGCATCACGCGGGATTCGTCTGTTGCAGGAAGAGGAAGAAGGGTTGCCGCTGGTAGGTCGTGTGGCTGCCGGTGAACCACTTCTGGCGCAACAGCATATTGAAGGTCATTATCAGGTCGATCCTTCCTTATTCAAGCCGAATGCTGATTTCCTGCTGCGCGTCAGCGGGATGTCGATGAAAGATATCGGCATTATGGATGGTGACTTGCTGGCAGTGCATAAAACTCAGGATGTACGTAACGGTCAGGTCGTTGTCGCACGTATTGATGACGAAGTTACCGTTAAGCGCCTGAAAAAACAGGGCAATAAAGTCGAACTGTTGCCAGAAAATAGCGAGTTTAAACCAATTGTCGTTGACCTTCGTCAGCAGAGCTTCACCATTGAAGGGCTGGCGGTTGGGGTTATTCGCAACGGCGACTGGCTGTAA", - "dna_sequence_length": 609, - "functions": [ - "transcriptional repressor of SOS regulon" - ], - "id": "CDS_3959", - "location": [ - [ - "NC_000913", - 4257115, - "+", - 609 - ] - ], - "md5": "44cf7d86ba311063359108346586762d", - "parent_gene": "", - "protein_md5": "0f8aa8f591e0c3d6aa927c9a32cd25c9", - "protein_translation": "MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL", - "protein_translation_length": 202, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "dinF" - ], - [ - "gene_synonym", - "GI:162135919" - ], - [ - "gene_synonym", - "JW4004" - ], - [ - "gene_synonym", - "GeneID:948554" - ], - [ - "gene_synonym", - "EcoGene:EG11491" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28303" - ], - [ - "gene_synonym", - "NP_418468.3" - ], - [ - "gene_synonym", - "ASAP:ABE-0013243" - ], - [ - "gene_synonym", - "b4044" - ], - [ - "gene_synonym", - "ECK4036" - ] - ], - "dna_sequence": "ATGCCGCCTGGCGTCGCGGTTTGTTTTTCATCTCTCTTCATCAGGCTTGTCTGCATGGCATTCCTCACTTCATCTGATAAAGCACTCTGGCATCTCGCCTTACCCATGATTTTCTCCAATATCACCGTTCCGTTGCTGGGACTGGTCGATACGGCGGTAATTGGTCATCTTGATAGCCCGGTTTATTTGGGCGGCGTGGCGGTTGGTGCAACGGCGACCAGCTTTCTCTTTATGCTGTTGCTGTTTTTACGCATGAGCACCACCGGGCTGACTGCGCAGGCTTATGGTGCCAAAAATCCTCAGGCATTAGCCCGTACGCTGGTGCAACCGTTGCTGTTGGCGTTGGGGGCTGGGGCGTTAATTGCGCTGCTGCGTACGCCGATTATCGATCTGGCGCTGCATATTGTTGGCGGTAGTGAGGCAGTCCTGGAACAGGCGCGGCGCTTTCTTGAAATCCGCTGGTTAAGCGCACCGGCGTCGCTGGCGAATCTGGTATTACTCGGTTGGTTACTCGGCGTGCAATATGCCCGTGCGCCAGTAATTTTGTTAGTGGTCGGCAATATCCTCAACATTGTGCTGGATGTCTGGCTGGTGATGGGGCTGCATATGAACGTGCAGGGCGCGGCGCTGGCGACGGTTATTGCGGAATATGCAACATTGCTGATTGGTCTGCTAATGGTGCGTAAAATCCTCAAACTACGCGGAATTTCCGGCGAAATGCTGAAAACTGCCTGGCGAGGAAACTTCCGTCGCTTGCTGGCGCTTAACCGCGATATCATGCTGCGTTCGCTGTTGTTGCAACTCTGTTTCGGCGCGATCACCGTACTTGGCGCGCGACTGGGGAGTGACATTATCGCTGTTAACGCGGTTCTGATGACGCTACTCACCTTTACCGCCTATGCGCTGGATGGTTTTGCCTACGCGGTTGAAGCGCACTCCGGTCAGGCATACGGTGCGCGCGACGGTAGCCAGTTGCTGGATGTCTGGCGGGCAGCGTGCCGCCAGTCGGGGATCGTAGCGTTACTGTTTTCGGTGGTTTATTTGCTGGCTGGGGAACACATCATTGCGTTACTGACGTCGTTAACCCAGATTCAGCAGCTGGCTGACCGCTATCTTATCTGGCAGGTGATTTTGCCGGTGGTTGGCGTCTGGTGTTATCTGCTGGACGGCATGTTTATAGGCGCAACGCGTGCCACCGAAATGCGTAACAGTATGGCGGTGGCCGCCGCAGGTTTTGCGCTGACGCTCCTTACGCTGCCGTGGCTGGGTAATCATGCTTTGTGGCTGGCATTAACCGTCTTTCTGGCGTTGCGCGGGCTTTCTCTGGCGGCTATCTGGCGGCGTCACTGGCGCAATGGTACCTGGTTTGCCGCAACGTGA", 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"gene_synonym", - "JW4005" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68206" - ], - [ - "gene_synonym", - "yjbJ" - ], - [ - "gene_synonym", - "GeneID:948553" - ], - [ - "gene_synonym", - "EcoGene:EG11928" - ], - [ - "gene_synonym", - "GI:16131871" - ], - [ - "gene_synonym", - "ASAP:ABE-0013247" - ], - [ - "gene_synonym", - "ECK4037" - ], - [ - "gene_synonym", - "NP_418469.1" - ] - ], - "dna_sequence": "ATGAATAAAGATGAAGCCGGCGGTAACTGGAAACAGTTTAAAGGTAAAGTGAAAGAGCAATGGGGCAAACTGACCGATGATGATATGACGATCATTGAAGGTAAACGTGATCAACTGGTCGGTAAAATCCAGGAACGTTATGGTTATCAGAAAGATCAGGCAGAAAAAGAGGTCGTGGATTGGGAAACCCGCAATGAATATCGCTGGTAA", - "dna_sequence_length": 210, - "functions": [ - "stress-induced protein, UPF0337 family" - ], - "id": "CDS_3961", - "location": [ - [ - "NC_000913", - 4259237, - "+", - 210 - ] - ], - "md5": "406404f2f6c0088f8e98a593c83c958a", - "parent_gene": "", - "protein_md5": "93fa29eb4f4d25c14ab2ab5e3612a356", - "protein_translation": "MNKDEAGGNWKQFKGKVKEQWGKLTDDDMTIIEGKRDQLVGKIQERYGYQKDQAEKEVVDWETRNEYRW", - "protein_translation_length": 69, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "zur" - ], - [ - "gene_synonym", - "b4046" - ], - [ - "gene_synonym", - "GI:90111679" - ], - [ - "gene_synonym", - "GeneID:948552" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC51" - ], - [ - "gene_synonym", - "yjbK" - ], - [ - "gene_synonym", - "EcoGene:EG11929" - ], - [ - "gene_synonym", - "JW5714" - ], - [ - "gene_synonym", - "NP_418470.4" - ], - [ - "gene_synonym", - "ECK4038" - ], - [ - "gene_synonym", - "ASAP:ABE-0013249" - ] - ], - "dna_sequence": "ATGGAAAAGACCACAACGCAGGAGTTATTAGCGCAGGCTGAAAAAATCTGCGCGCAGCGTAATGTGCGCCTGACCCCACAGCGCCTGGAAGTGTTGCGCCTGATGAGTCTGCAGGATGGCGCTATCAGCGCTTATGATCTGCTTGATTTACTGCGCGAAGCTGAACCGCAAGCCAAGCCGCCAACGGTTTATCGCGCGCTGGATTTTCTGCTTGAGCAAGGTTTTGTGCATAAGGTGGAATCCACCAACAGTTATGTGCTCTGTCATCTGTTCGATCAGCCCACCCATACGTCAGCCATGTTTATTTGCGATCGCTGCGGCGCAGTGAAAGAAGAGTGTGCAGAAGGCGTGGAAGACATTATGCATACGCTGGCGGCAAAAATGGGGTTTGCCCTGCGGCATAATGTGATTGAAGCACATGGGCTCTGTGCGGCATGTGTAGAAGTGGAAGCGTGTCGTCATCCTGAACAGTGCCAGCATGATCACTCTGTGCAGGTGAAAAAGAAACCGCGTTAA", - "dna_sequence_length": 516, - "functions": [ - "transcriptional repressor, Zn(II)-binding" - ], - "id": "CDS_3962", - "location": [ - [ - "NC_000913", - 4260003, - "-", - 516 - ] - ], - "md5": "3a1e72f10626d7df8ff8553514892c34", - "parent_gene": "", - "protein_md5": "4d1307ac9a78a32c71b172790fb90c0c", - "protein_translation": "MEKTTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISAYDLLDLLREAEPQAKPPTVYRALDFLLEQGFVHKVESTNSYVLCHLFDQPTHTSAMFICDRCGAVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLCAACVEVEACRHPEQCQHDHSVQVKKKPR", - "protein_translation_length": 171, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4047" - ], - [ - "gene_synonym", - "JW4007" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32693" - ], - [ - "gene_synonym", - "yjbL" - ], - [ - "gene_synonym", - "GeneID:948551" - ], - [ - "gene_synonym", - "GI:16131873" - ], - [ - "gene_synonym", - "NP_418471.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013253" - ], - [ - "gene_synonym", - "ECK4039" - ], - [ - "gene_synonym", - "EcoGene:EG11930" - ] - ], - "dna_sequence": "ATGTTGAAGATAATACCCGGTGCAACTGGATACTTTAATAAAACACTCAATTCAAATCAATTCGATAATGAAGATGCAATCAAAGATAAATTAGATAATAGAGGTTCAATCAAAGGTAAATTAAATAATATATATGGTAAATCTATTGATTATGCAGCGCTGCGTCATCGGGATATAATTATTGCAAAAATAGATTTGTTTATTCAACGAATCACGCATAATTTATGGCATGCACGTAAAAAAATGTGTTTTTAA", - "dna_sequence_length": 255, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_3963", - "location": [ - [ - "NC_000913", - 4260321, - "+", - 255 - ] - ], - "md5": "b08c2313b2e0bcda6a93d0135bee2dc8", - "parent_gene": "", - "protein_md5": "38a3977740e37b9bb28288ef09c15954", - "protein_translation": "MLKIIPGATGYFNKTLNSNQFDNEDAIKDKLDNRGSIKGKLNNIYGKSIDYAALRHRDIIIAKIDLFIQRITHNLWHARKKMCF", - "protein_translation_length": 84, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418472.1" - ], - [ - "gene_synonym", - "yjbM" - ], - [ - "gene_synonym", - "JW4008" - ], - [ - "gene_synonym", - "GeneID:948550" - ], - [ - "gene_synonym", - "b4048" - ], - [ - "gene_synonym", - "ASAP:ABE-0013255" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32694" - ], - [ - "gene_synonym", - "GI:16131874" - ], - [ - "gene_synonym", - "ECK4040" - ], - [ - "gene_synonym", - "EcoGene:EG11931" - ] - ], - "dna_sequence": "ATGTGGGTCAATAAGTATATTGACGATTGCACTGATGAGGATTTAAACGATCGTGACTTTATTGCATCAGTTGTTGACCGGGCTATTTTTCATTTCGCGATTAATAGTATATGTAATCCTGGGGATAATAAAGATGCAATGCCCATTGAACAATGTACTTTTGATGTAGAAACTAAGAATGACCTTCCCTCCACGGTTCAGCTATTTTATGAGGAATCTAAGGATAATGAACCTTTAGCGAATATACATTTTCAAGCAATAGGTTCTGGTTTTTTAACGTTTGTTAATGCCTGCCAGGAACATGATGACAACAGCTTAAAATTATTTGCTTCGCTGTTAATTTCACTTTCATATTCTAGTGCCTACGCAGATTTATCAGAAACAGTGTATATTAATGAAAATAATGAGAGCTACCTGAAAGCTCAGTTTGAAAAATTATCTCAACGTGATATGAAGAAGTACCTGGGAGAGATGAAGCGTCTGGCTGATGGGGGAGAAATGAATTTTGATGGCTATCTGGATAAGATGTCACATCTGGTGAATGAAGGAACGCTCGATCCTGATATTTTAAGCAAAATGCGAGATGCTGCACCACAATTAATTAGCTTCGCGAAGTCGTTTGACCCAACCTCAAAGGAAGAGATTAAAATACTTACAGACACTTCTAAATTAATTTATGATTTGTTCGGGGTTAAATCGGAGAAATAA", - "dna_sequence_length": 708, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_3964", - "location": [ - [ - "NC_000913", - 4260599, - "+", - 708 - ] - ], - "md5": "08b08250fa2c9b646be99ef897b0e30a", - "parent_gene": "", - "protein_md5": "0c1dfadd571380c877acbbb5ccffdf50", - "protein_translation": "MWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICNPGDNKDAMPIEQCTFDVETKNDLPSTVQLFYEESKDNEPLANIHFQAIGSGFLTFVNACQEHDDNSLKLFASLLISLSYSSAYADLSETVYINENNESYLKAQFEKLSQRDMKKYLGEMKRLADGGEMNFDGYLDKMSHLVNEGTLDPDILSKMRDAAPQLISFAKSFDPTSKEEIKILTDTSKLIYDLFGVKSEK", - "protein_translation_length": 235, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418473.3" - ], - [ - "gene_synonym", - "GeneID:948558" - ], - [ - "gene_synonym", - "GI:635341467" - ], - [ - "gene_synonym", - "yjbN" - ], - [ - "gene_synonym", - "dusA" - ], - [ - "gene_synonym", - "b4049" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32695" - ], - [ - "gene_synonym", - "JW5950" - ], - [ - "gene_synonym", - "EcoGene:EG11932" - ], - [ - "gene_synonym", - "ECK4041" - ], - [ - "gene_synonym", - "ASAP:ABE-0013258" - ] - ], - "dna_sequence": "ATGCACGGTAATTCTGAAATGCAAAAAATCAACCAAACCAGCGCAATGCCTGAAAAAACTGACGTTCACTGGAGTGGTCGGTTTAGCGTTGCACCAATGCTCGACTGGACGGACAGACATTGCCGCTATTTCTTGCGTCTGCTTTCCCGCAATACGTTGCTGTATACCGAAATGGTGACCACAGGGGCGATTATTCACGGTAAAGGTGATTATCTGGCGTACAGTGAAGAAGAACATCCGGTAGCGTTGCAACTGGGCGGTAGCGATCCGGCGGCGCTGGCGCAGTGTGCAAAGCTGGCAGAAGCGCGCGGATATGATGAGATCAACCTGAATGTCGGCTGCCCGTCTGACCGGGTGCAGAACGGCATGTTTGGTGCGTGTCTGATGGGTAATGCGCAGCTGGTTGCCGACTGCGTGAAAGCGATGCGCGATGTGGTGTCGATTCCGGTGACGGTGAAAACGCGTATTGGCATCGACGACCAGGACAGCTATGAATTTCTCTGCGATTTCATCAATACCGTTTCCGGCAAAGGCGAGTGTGAGATGTTCATCATCCACGCACGTAAAGCCTGGCTTTCGGGGTTAAGCCCGAAAGAAAACCGTGAAATCCCGCCGCTCGATTATCCGCGTGTGTATCAACTGAAGCGTGACTTTCCGCATCTGACAATGTCGATTAACGGTGGTATCAAGTCGCTGGAAGAGGCCAAAGCACACCTGCAACATATGGATGGCGTGATGGTCGGGCGCGAGGCGTATCAGAATCCGGGTATTCTGGCGGCGGTAGACCGGGAGATCTTTGGTTCCTCGGATACCGATGCCGATCCGGTGGCGGTAGTGCGCGCCATGTATCCGTACATTGAGCGTGAACTCAGCCAGGGGACGTATCTCGGCCATATTACCCGGCATATGTTGGGCTTGTTCCAGGGTATTCCTGGCGCGCGGCAGTGGCGGCGTTATTTAAGTGAAAATGCCCATAAAGCGGGTGCAGACATTAATGTGCTGGAACACGCGCTCAAACTGGTGGCGGATAAGCGTTAA", - "dna_sequence_length": 1038, - "functions": [ - "tRNA-dihydrouridine synthase A" - ], - "id": "CDS_3965", - "location": [ - [ - "NC_000913", - 4261669, - "+", - 1038 - ] - ], - "md5": "e660d17845d4594687f6cb70fa63530d", - "parent_gene": "", - "protein_md5": "a45a1d59739abb941afb6bfdadcce6a3", - "protein_translation": "MHGNSEMQKINQTSAMPEKTDVHWSGRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQNPGILAAVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADINVLEHALKLVADKR", - "protein_translation_length": 345, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4050" - ], - [ - "gene_synonym", - "GI:90111680" - ], - [ - "gene_synonym", - "JW5716" - ], - [ - "gene_synonym", - "pspG" - ], - [ - "gene_synonym", - "GeneID:948557" - ], - [ - "gene_synonym", - "ASAP:ABE-0013260" - ], - [ - "gene_synonym", - "NP_418474.4" - ], - [ - "gene_synonym", - "yjbO" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32696" - ], - [ - "gene_synonym", - "EcoGene:EG11933" - ], - [ - "gene_synonym", - "ECK4042" - ] - ], - "dna_sequence": "ATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTCGGCGGTATGCTGGCATTGATGATTAAGTTGCTGCCGTGGTTACTACTGGCGATTGCGGTGGTGTGGGTTATTAAGGCGATTAAAGCACCAAAAGTGCCGAAATATCAGCGTTATGACCGCTGGCGTTACTAA", - "dna_sequence_length": 243, - "functions": [ - "phage shock protein G" - ], - "id": "CDS_3966", - "location": [ - [ - "NC_000913", - 4262840, - "+", - 243 - ] - ], - "md5": "4164a4be6f5aa4199cf8b649d0920017", - "parent_gene": "", - "protein_md5": "4443201c69f83993fd291831999936fe", - "protein_translation": "MLELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALMIKLLPWLLLAIAVVWVIKAIKAPKVPKYQRYDRWRY", - "protein_translation_length": 80, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4051" - ], - [ - "gene_synonym", - "JW4011" - ], - [ - "gene_synonym", - "hzc" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28304" - ], - [ - "gene_synonym", - "hcz" - ], - [ - "gene_synonym", - "EcoGene:EG11492" - ], - [ - "gene_synonym", - "ASAP:ABE-0013262" - ], - [ - "gene_synonym", - "GeneID:948556" - ], - [ - "gene_synonym", - "NP_418475.1" - ], - [ - "gene_synonym", - "GI:16131877" - ], - [ - "gene_synonym", - "qorA" - ], - [ - "gene_synonym", - "ECK4043" - ], - [ - "gene_synonym", - "qor" - ] - ], - "dna_sequence": "ATGGCAACACGAATTGAATTTCACAAGCACGGTGGCCCGGAAGTACTTCAAGCCGTAGAGTTCACTCCTGCCGATCCGGCGGAGAATGAAATCCAGGTCGAAAATAAAGCCATCGGCATCAATTTTATCGACACATATATCCGCAGCGGCCTTTACCCGCCGCCATCGCTACCCAGCGGATTAGGCACCGAAGCAGCAGGCATCGTGAGTAAAGTCGGCAGTGGTGTAAAGCATATTAAGGCAGGCGATCGTGTAGTCTATGCGCAGTCGGCGTTAGGCGCTTACAGCTCTGTGCATAACATTATTGCGGATAAAGCGGCGATTCTGCCTGCGGCAATTTCTTTTGAGCAAGCTGCGGCATCCTTCCTGAAAGGCTTAACGGTTTATTATCTGCTGCGCAAAACCTATGAAATTAAACCCGATGAACAGTTCCTGTTCCACGCAGCGGCTGGCGGCGTTGGCTTAATTGCCTGCCAGTGGGCAAAAGCCCTGGGCGCGAAACTTATCGGCACCGTAGGAACCGCGCAAAAAGCGCAGAGCGCGCTAAAAGCGGGCGCGTGGCAGGTTATTAACTATCGTGAAGAGGATCTGGTCGAGCGGTTAAAAGAGATCACCGGCGGTAAGAAAGTGCGCGTGGTGTACGATTCCGTGGGCAGAGACACCTGGGAACGGTCGCTGGATTGCCTGCAACGCCGCGGCTTAATGGTCAGTTTTGGCAACTCATCAGGTGCGGTTACCGGTGTGAACTTAGGCATTCTCAATCAAAAAGGCTCGTTGTATGTGACACGCCCTTCCCTGCAAGGCTATATCACCACGCGGGAGGAATTAACCGAGGCCAGTAATGAACTGTTCTCTTTGATTGCCAGCGGTGTGATTAAGGTCGATGTCGCCGAGCAGCAGAAATATCCGCTGAAGGATGCGCAGCGTGCGCATGAGATTCTGGAAAGCCGGGCGACGCAAGGTTCCAGCCTGCTGATTCCATAA", - "dna_sequence_length": 984, - "functions": [ - "quinone oxidoreductase, NADPH-dependent" - ], - "id": "CDS_3967", - "location": [ - [ - "NC_000913", - 4264231, - "-", - 984 - ] - ], - "md5": "4aedb24e18190b947df62c57035161d9", - "parent_gene": "", - "protein_md5": "ee7e32053af8174284ba5d1197f85c7e", - "protein_translation": "MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP", - "protein_translation_length": 327, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4052" - ], - [ - "gene_synonym", - "ASAP:ABE-0013269" - ], - [ - "gene_synonym", - "JW4012" - ], - [ - "gene_synonym", - "NP_418476.1" - ], - [ - "gene_synonym", - "grpA" - ], - [ - "gene_synonym", - "GeneID:948555" - ], - [ - "gene_synonym", - "grpD" - ], - [ - "gene_synonym", - "dnaB" - ], - [ - "gene_synonym", - "EcoGene:EG10236" - ], - [ - "gene_synonym", - "groP" - ], - [ - "gene_synonym", - "ECK4044" - ], - [ - "gene_synonym", - "GI:16131878" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACB0" - ] - ], - "dna_sequence": "ATGGCAGGAAATAAACCCTTCAACAAACAGCAGGCTGAACCCCGCGAACGCGATCCACAAGTTGCCGGGCTGAAAGTGCCTCCGCACTCGATCGAAGCGGAGCAGTCGGTGTTGGGCGGTTTAATGCTAGATAACGAACGCTGGGATGATGTAGCCGAGCGTGTGGTAGCAGACGATTTTTACACCCGCCCACACCGTCATATCTTTACTGAAATGGCGCGTTTGCAGGAAAGCGGTAGCCCTATCGATCTGATTACTCTTGCGGAATCGCTGGAACGCCAGGGGCAACTCGATAGCGTCGGTGGTTTTGCTTATCTGGCAGAGCTGTCAAAAAATACGCCAAGTGCGGCTAACATCAGTGCCTATGCGGACATCGTGCGTGAACGTGCCGTTGTCCGTGAGATGATCTCGGTTGCGAATGAGATTGCCGAAGCTGGTTTTGATCCGCAGGGGCGTACCAGCGAAGATCTGCTGGATCTGGCTGAATCCCGCGTCTTTAAAATTGCCGAAAGTCGTGCGAACAAAGACGAAGGGCCGAAGAACATCGCCGATGTGCTCGACGCAACCGTGGCGCGTATTGAGCAGTTGTTTCAGCAGCCACACGATGGCGTTACCGGGGTAAACACCGGTTATGACGATCTCAACAAAAAAACCGCTGGCTTGCAGCCGTCGGATTTGATCATCGTCGCCGCGCGTCCGTCGATGGGTAAAACAACATTTGCGATGAACCTCGTCGAAAACGCGGCGATGTTGCAGGATAAACCGGTACTTATCTTCTCGCTGGAGATGCCATCAGAACAGATCATGATGCGTTCTCTGGCGTCGCTGTCGCGCGTTGACCAGACTAAAATCCGTACCGGGCAGCTCGATGACGAAGACTGGGCGCGCATTTCCGGCACCATGGGTATTTTGCTCGAAAAACGCAATATCTATATCGATGACTCCTCCGGCCTGACGCCAACGGAAGTGCGTTCCCGCGCACGCCGTATTGCCCGTGAACACGGCGGCATCGGGCTTATCATGATCGACTACCTGCAACTGATGCGCGTACCGGCGCTTTCCGATAACCGTACGCTGGAAATTGCAGAAATCTCTCGCTCGCTGAAAGCACTGGCGAAAGAACTGAACGTGCCGGTGGTGGCGCTGTCCCAGTTGAACCGTTCTCTGGAACAACGTGCCGACAAACGCCCGGTCAACTCCGACCTGCGTGAATCTGGCTCTATCGAGCAGGATGCGGACTTGATCATGTTTATCTATCGTGATGAGGTGTATCACGAAAACAGTGATTTAAAAGGCATCGCGGAAATTATTATCGGTAAACAACGTAACGGCCCAATCGGGACGGTACGCCTGACCTTTAACGGTCAATGGTCGCGCTTCGACAACTATGCGGGGCCGCAGTACGACGACGAATAA", 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"gene_synonym", - "GeneID:948564" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6B4" - ], - [ - "gene_synonym", - "EcoGene:EG10001" - ], - [ - "gene_synonym", - "NP_418477.1" - ], - [ - "gene_synonym", - "GI:16131879" - ], - [ - "gene_synonym", - "alr" - ], - [ - "gene_synonym", - "ECK4045" - ] - ], - "dna_sequence": "ATGCAAGCGGCAACTGTTGTGATTAACCGCCGCGCTCTGCGACACAACCTGCAACGTCTTCGTGAACTGGCCCCTGCCAGTAAAATGGTTGCGGTGGTGAAAGCGAACGCTTATGGTCACGGTCTTCTTGAGACCGCGCGAACGCTCCCCGATGCTGACGCCTTTGGCGTAGCCCGTCTCGAAGAAGCTCTGCGACTGCGTGCGGGGGGAATCACCAAACCTGTACTGTTACTCGAAGGCTTTTTTGATGCCAGAGATCTGCCGACGATTTCTGCGCAACATTTTCATACCGCCGTGCATAACGAAGAACAGCTGGCTGCGCTGGAAGAGGCTAGCCTGGACGAGCCGGTTACCGTCTGGATGAAACTCGATACCGGTATGCACCGTCTGGGCGTAAGGCCGGAACAGGCTGAGGCGTTTTATCATCGCCTGACCCAGTGCAAAAACGTTCGTCAGCCGGTGAATATCGTCAGCCATTTTGCGCGCGCGGATGAACCAAAATGTGGCGCAACCGAGAAACAACTCGCTATCTTTAATACCTTTTGCGAAGGCAAACCTGGTCAACGTTCCATTGCCGCGTCGGGTGGCATTCTGCTGTGGCCACAGTCGCATTTTGACTGGGTGCGCCCGGGCATCATTCTTTATGGCGTCTCGCCGCTGGAAGATCGCTCCACCGGTGCCGATTTTGGCTGTCAGCCAGTGATGTCACTAACCTCCAGCCTGATTGCCGTGCGTGAGCATAAAGCCGGAGAGCCTGTTGGTTATGGTGGAACCTGGGTAAGCGAACGTGATACCCGTCTTGGCGTAGTCGCGATGGGCTATGGCGATGGTTATCCGCGCGCCGCGCCGTCCGGTACGCCAGTGCTGGTGAACGGTCGCGAAGTACCGATTGTCGGGCGCGTGGCGATGGATATGATCTGCGTAGACTTAGGTCCACAGGCGCAGGACAAAGCCGGGGATCCGGTCATTTTATGGGGCGAAGGTTTGCCCGTAGAACGTATCGCTGAAATGACGAAAGTAAGCGCTTACGAACTTATTACGCGCCTGACTTCAAGGGTCGCGATGAAATACGTGGATTAA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P04693" - ], - [ - "gene_synonym", - "tyrB" - ], - [ - "gene_synonym", - "EcoGene:EG11040" - ], - [ - "gene_synonym", - "ECK4046" - ], - [ - "gene_synonym", - "GI:16131880" - ] - ], - "dna_sequence": "GTGTTTCAAAAAGTTGACGCCTACGCTGGCGACCCGATTCTTACGCTTATGGAGCGTTTTAAAGAAGACCCTCGCAGCGACAAAGTGAATTTAAGTATCGGTCTGTACTACAACGAAGACGGAATTATTCCACAACTGCAAGCCGTGGCGGAGGCGGAAGCGCGCCTGAATGCGCAGCCTCATGGCGCTTCGCTTTATTTACCGATGGAAGGGCTTAACTGCTATCGCCATGCCATTGCGCCGCTGCTGTTTGGTGCGGACCATCCGGTACTGAAACAACAGCGCGTAGCAACCATTCAAACCCTTGGCGGCTCCGGGGCATTGAAAGTGGGCGCGGATTTCCTGAAACGCTACTTCCCGGAATCAGGCGTCTGGGTCAGCGATCCTACCTGGGAAAACCACGTAGCAATATTCGCCGGGGCTGGATTCGAAGTGAGTACTTACCCCTGGTATGACGAAGCGACTAACGGCGTGCGCTTTAATGACCTGTTGGCGACGCTGAAAACATTACCTGCCCGCAGTATTGTGTTGCTGCATCCATGTTGCCACAACCCAACGGGTGCCGATCTCACTAATGATCAGTGGGATGCGGTGATTGAAATTCTCAAAGCCCGCGAGCTTATTCCATTCCTCGATATTGCCTATCAAGGATTTGGTGCCGGTATGGAAGAGGATGCCTACGCTATTCGCGCCATTGCCAGCGCTGGATTACCCGCTCTGGTGAGCAATTCGTTCTCGAAAATTTTCTCCCTTTACGGCGAGCGCGTCGGCGGACTTTCTGTTATGTGTGAAGATGCCGAAGCCGCTGGCCGCGTACTGGGGCAATTGAAAGCAACAGTTCGCCGCAACTACTCCAGCCCGCCGAATTTTGGTGCGCAGGTGGTGGCTGCAGTGCTGAATGACGAGGCATTGAAAGCCAGCTGGCTGGCGGAAGTAGAAGAGATGCGTACTCGCATTCTGGCAATGCGTCAGGAATTGGTGAAGGTATTAAGCACAGAGATGCCAGAACGCAATTTCGATTATCTGCTTAATCAGCGCGGCATGTTCAGTTATACCGGTTTAAGTGCCGCTCAGGTTGACCGACTACGTGAAGAATTTGGTGTCTATCTCATCGCCAGCGGTCGCATGTGTGTCGCCGGGTTAAATACGGCAAATGTACAACGTGTGGCAAAGGCGTTTGCTGCGGTGATGTAA", 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"EcoGene:EG14350" - ], - [ - "gene_synonym", - "ECK4429" - ], - [ - "gene_synonym", - "yjbS" - ], - [ - "gene_synonym", - "GI:145698341" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P58036" - ] - ], - "dna_sequence": "ATGAATATATCATATGTGAATAGCAACAAAACGACATCTTTACCTGTTGAGCTAGATGCACTAAATAATAAAGATATCTCTTATGCCAAAGATTTCTTTTTATACATAGAAACACAGTTAAAAATTGCAAAAGATTTTTTAGACCTGGAGAAGAAGTATCAAGTTCTATTGCAAGTAAAGTTTTTCACGCATTTATTGATTTAG", - "dna_sequence_length": 204, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_3971", - "location": [ - [ - "NC_000913", - 4269012, - "-", - 204 - ] - ], - "md5": "9dec15c0f2cecce7a79341974ea23745", - "parent_gene": "", - "protein_md5": "609bcf8ee00026bc83b30f37b3cbcb58", - "protein_translation": "MNISYVNSNKTTSLPVELDALNNKDISYAKDFFLYIETQLKIAKDFLDLEKKYQVLLQVKFFTHLLI", - "protein_translation_length": 67, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW4015" - ], - [ - "gene_synonym", - "aphA" - ], - [ - "gene_synonym", - "b4055" - ], - [ - "gene_synonym", - "GeneID:948562" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE22" - ], - [ - "gene_synonym", - "NP_418479.1" - ], - [ - "gene_synonym", - "napA" - ], - [ - "gene_synonym", - "yjbP" - ], - [ - "gene_synonym", - "hobH" - ], - [ - "gene_synonym", - "EcoGene:EG11934" - ], - [ - "gene_synonym", - "ASAP:ABE-0013283" - ], - [ - "gene_synonym", - "GI:16131881" - ], - [ - "gene_synonym", - "ECK4047" - ] - ], - "dna_sequence": "ATGCGCAAGATCACACAGGCAATCAGTGCCGTTTGCTTATTGTTCGCTCTAAACAGTTCCGCTGTTGCCCTGGCCTCATCTCCTTCACCGCTTAACCCTGGGACTAACGTTGCCAGGCTTGCTGAACAGGCACCCATTCATTGGGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCTTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTCAGCATTCCAAAAGAGGTCGCTCGCCAGCTGATTGATATGCATGTACGCCGCGGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTTGGTGAAGAGGTGATCGTCAATTCAGAATACTGA", - "dna_sequence_length": 714, - "functions": [ - "acid phosphatase/phosphotransferase, class B, non-specific" - ], - "id": "CDS_3972", - "location": [ - [ - "NC_000913", - 4269414, - "+", - 714 - ] - ], - "md5": "4bf15d0a27e9379f6f54eb1c1737036f", - "parent_gene": "", - "protein_md5": "d303538a3c8771046b84288d4297de26", - "protein_translation": "MRKITQAISAVCLLFALNSSAVALASSPSPLNPGTNVARLAEQAPIHWVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTYKPLPQAGAFGEEVIVNSEY", - "protein_translation_length": 237, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418480.1" - ], - [ - "gene_synonym", - "JW4017" - ], - [ - "gene_synonym", - "b4056" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF48" - ], - [ - "gene_synonym", - "GeneID:948561" - ], - [ - "gene_synonym", - "ECK4048" - ], - [ - "gene_synonym", - "yjbQ" - ], - [ - "gene_synonym", - "ASAP:ABE-0013286" - ], - [ - "gene_synonym", - "GI:16131882" - ], - [ - "gene_synonym", - "EcoGene:EG11935" - ] - ], - "dna_sequence": "ATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATCGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGACTATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGGGCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGACACTACAAGGGGAGTAA", - "dna_sequence_length": 417, - "functions": [ - "thiamine phosphate synthase" - ], - "id": "CDS_3973", - "location": [ - [ - "NC_000913", - 4270238, - "+", - 417 - ] - ], - "md5": "1d0371d39936cf3c7c854090ef4e88d1", - "parent_gene": "", - "protein_md5": "ab5227f9f7cac5ee0aa61af2bc9c67d5", - "protein_translation": "MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE", - "protein_translation_length": 138, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF50" - ], - [ - "gene_synonym", - "b4057" - ], - [ - "gene_synonym", - "GeneID:948560" - ], - [ - "gene_synonym", - "JW4018" - ], - [ - "gene_synonym", - "NP_418481.1" - ], - [ - "gene_synonym", - "ECK4049" - ], - [ - "gene_synonym", - "yjbR" - ], - [ - "gene_synonym", - "ASAP:ABE-0013288" - ], - [ - "gene_synonym", - "GI:16131883" - ], - [ - "gene_synonym", - "EcoGene:EG11936" - ] - ], - "dna_sequence": "ATGACCATTTCGGAGTTGCTACAATATTGCATGGCAAAACCAGGCGCAGAACAGAGCGTGCATAATGACTGGAAAGCGACGCAGATCAAAGTGGAAGATGTACTGTTTGCGATGGTGAAAGAAGTAGAAAATCGCCCAGCTGTTTCGCTGAAAACCAGCCCGGAGCTGGCGGAGCTGCTACGTCAGCAGCACAGCGATGTGCGTCCAAGCCGCCATCTGAATAAAGCGCACTGGAGCACCGTGTATCTCGACGGTTCGCTGCCAGATTCGCAAATCTATTATCTGGTGGATGCGTCTTATCAGCAGGCGGTGAATTTACTGCCGGAAGAAAAACGTAAATTGCTGGTGCAACTCTGA", - "dna_sequence_length": 357, - "functions": [ - "DUF419 family protein" - ], - "id": "CDS_3974", - "location": [ - [ - "NC_000913", - 4270658, - "+", - 357 - ] - ], - "md5": "d9c758b6a0ec3186c63e511691f8fffa", - "parent_gene": "", - "protein_md5": "831a5687da56a321a6ae8999dc605323", - "protein_translation": "MTISELLQYCMAKPGAEQSVHNDWKATQIKVEDVLFAMVKEVENRPAVSLKTSPELAELLRQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQAVNLLPEEKRKLLVQL", - "protein_translation_length": 118, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013290" - ], - [ - "gene_synonym", - "GI:16131884" - ], - [ - "gene_synonym", - "GeneID:948559" - ], - [ - "gene_synonym", - "b4058" - ], - [ - "gene_synonym", - "JW4019" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A698" - ], - [ - "gene_synonym", - "NP_418482.1" - ], - [ - "gene_synonym", - "dar" - ], - [ - "gene_synonym", - "EcoGene:EG11061" - ], - [ - "gene_synonym", - "ECK4050" - ], - [ - "gene_synonym", - "uvrA" - ] - ], - "dna_sequence": "ATGGATAAGATCGAAGTTCGGGGCGCCCGCACCCATAATCTCAAAAACATCAACCTCGTTATCCCCCGCGACAAGCTCATTGTCGTGACCGGGCTTTCGGGTTCTGGCAAATCCTCGCTCGCTTTCGACACCTTATATGCCGAAGGGCAGCGCCGTTACGTTGAATCCCTTTCCGCCTACGCGCGGCAGTTTCTGTCACTGATGGAAAAGCCGGACGTCGATCATATTGAGGGGCTTTCTCCTGCCATCTCAATTGAGCAGAAATCGACGTCTCATAACCCGCGTTCTACGGTGGGGACAATCACCGAAATCCACGACTATTTGCGTTTGTTATTCGCCCGCGTTGGCGAGCCGCGCTGTCCGGACCACGACGTCCCGCTGGCGGCGCAAACCGTCAGCCAGATGGTGGATAACGTGCTGTCGCAGCCGGAAGGCAAGCGTCTGATGCTACTCGCGCCAATCATTAAAGAGCGCAAAGGCGAACACACCAAAACGCTGGAGAACCTGGCAAGCCAGGGCTACATCCGTGCTCGTATTGATGGCGAAGTCTGCGATCTTTCCGATCCGCCAAAACTGGAACTGCAAAAGAAACATACCATTGAAGTGGTGGTTGATCGCTTCAAGGTGCGTGACGATCTTACCCAACGTCTTGCCGAGTCATTTGAAACCGCGCTGGAGCTTTCCGGTGGTACCGCGGTAGTGGCGGATATGGACGACCCGAAAGCGGAAGAGCTGCTGTTCTCCGCCAACTTCGCCTGCCCAATTTGCGGCTACAGTATGCGTGAACTGGAGCCGCGACTGTTTTCGTTTAACAACCCGGCGGGGGCCTGCCCGACCTGCGACGGCCTTGGCGTACAGCAATATTTCGATCCTGATCGAGTGATCCAGAATCCGGAACTGTCGCTGGCTGGTGGTGCGATCCGTGGCTGGGATCGCCGCAACTTCTATTATTTCCAGATGCTGAAATCGCTGGCAGATCACTATAAGTTCGACGTCGAAGCGCCGTGGGGCAGCCTGAGCGCGAACGTGCATAAAGTGGTGTTGTACGGTTCTGGCAAAGAAAACATTGAATTCAAATACATGAACGATCGTGGCGATACCTCCATTCGTCGTCATCCGTTCGAAGGCGTGCTGCATAATATGGAGCGCCGCTATAAAGAGACGGAATCCAGCGCGGTACGCGAAGAATTAGCCAAGTTTATCAGTAATCGTCCGTGCGCCAGCTGCGAAGGGACGCGTCTGCGTCGGGAAGCGCGCCACGTGTATGTCGAGAATACGCCGCTGCCTGCTATCTCCGACATGAGCATTGGTCATGCGATGGAATTCTTCAACAATCTCAAACTCGCAGGTCAGCGGGCGAAGATTGCAGAAAAAATCCTTAAAGAGATCGGCGATCGTCTGAAATTCCTCGTTAACGTCGGCCTGAATTACCTGACGCTTTCCCGCTCGGCAGAAACGCTTTCTGGCGGTGAAGCACAGCGTATCCGTCTGGCGAGCCAGATTGGTGCGGGCCTGGTTGGCGTTATGTACGTGCTGGACGAGCCGTCTATCGGCCTGCACCAGCGTGATAACGAGCGCCTGTTGGGTACGCTTATCCATCTGCGCGATCTCGGTAATACCGTGATTGTGGTGGAGCACGACGAAGACGCAATTCGCGCCGCTGACCATGTGATCGACATTGGCCCGGGCGCAGGTGTTCACGGCGGTGAAGTGGTCGCAGAAGGTCCGCTGGAAGCGATTATGGCGGTGCCGGAGTCGTTGACCGGGCAGTACATGAGCGGCAAACGCAAGATTGAAGTGCCGAAGAAACGCGTTCCGGCGAATCCGGAAAAAGTGCTGAAGCTGACAGGCGCACGCGGCAACAACCTGAAGGACGTGACGCTGACGCTGCCGGTGGGTCTGTTTACCTGCATCACCGGGGTTTCAGGTTCCGGTAAATCGACGCTGATTAACGACACACTGTTCCCGATTGCCCAACGCCAGTTGAATGGGGCGACCATCGCCGAACCAGCACCGTATCGCGATATTCAGGGGCTGGAGCATTTCGATAAAGTGATCGATATCGACCAAAGCCCAATTGGTCGTACTCCACGTTCTAACCCGGCGACCTATACCGGCGTGTTTACGCCTGTGCGCGAACTGTTTGCGGGCGTACCGGAATCCCGTGCGCGCGGCTATACGCCGGGACGTTTCAGCTTTAACGTTCGTGGCGGACGCTGCGAGGCCTGTCAGGGCGATGGCGTGATCAAAGTGGAGATGCACTTCCTGCCGGATATCTACGTGCCGTGCGACCAGTGCAAAGGTAAACGCTATAACCGTGAAACGCTGGAGATTAAGTACAAAGGCAAAACCATCCACGAAGTGCTGGATATGACCATCGAAGAGGCGCGTGAGTTCTTTGATGCCGTACCTGCACTGGCGCGTAAGCTGCAAACGTTGATGGACGTTGGCCTGACGTACATTCGACTGGGGCAGTCCGCAACCACCCTTTCAGGCGGTGAAGCCCAGCGCGTGAAGCTGGCGCGTGAACTGTCAAAACGCGGCACCGGGCAGACGCTGTATATTCTCGACGAGCCGACCACCGGTCTGCACTTCGCCGATATTCAGCAACTGCTCGACGTACTGCATAAACTGCGCGATCAGGGCAACACCATTGTGGTGATTGAGCACAATCTCGACGTGATCAAAACCGCTGACTGGATTGTCGACCTGGGACCAGAAGGCGGCAGTGGTGGCGGCGAGATCCTCGTCTCCGGTACGCCAGAAACCGTCGCGGAGTGCGAAGCATCACACACGGCACGCTTCCTTAAGCCGATGCTGTAA", 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"MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML", - "protein_translation_length": 940, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "exrB" - ], - [ - "gene_synonym", - "GeneID:948570" - ], - [ - "gene_synonym", - "EcoGene:EG10976" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGE0" - ], - [ - "gene_synonym", - "b4059" - ], - [ - "gene_synonym", - "lexC" - ], - [ - "gene_synonym", - "ASAP:ABE-0013298" - ], - [ - "gene_synonym", - "JW4020" - ], - [ - "gene_synonym", - "ECK4051" - ], - [ - "gene_synonym", - "NP_418483.1" - ], - [ - "gene_synonym", - "GI:16131885" - ], - [ - "gene_synonym", - "ssb" - ] - ], - "dna_sequence": "ATGGCCAGCAGAGGCGTAAACAAGGTTATTCTCGTTGGTAATCTGGGTCAGGACCCGGAAGTACGCTACATGCCAAATGGTGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGCGAGATGAAAGAACAGACTGAATGGCACCGCGTTGTGCTGTTCGGCAAACTGGCAGAAGTGGCGAGCGAATATCTGCGTAAAGGTTCTCAGGTTTATATCGAAGGTCAGCTGCGTACCCGTAAATGGACCGATCAATCCGGTCAGGATCGCTACACCACAGAAGTCGTGGTGAACGTTGGCGGCACCATGCAGATGCTGGGTGGTCGTCAGGGTGGTGGCGCTCCGGCAGGTGGCAATATCGGTGGTGGTCAGCCGCAGGGCGGTTGGGGTCAGCCTCAGCAGCCGCAGGGTGGCAATCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGTCCGCTCCGGCAGCGCCGTCTAACGAGCCGCCGATGGACTTTGATGATGACATTCCGTTCTGA", - "dna_sequence_length": 537, - "functions": [ - "single-stranded DNA-binding protein" - ], - "id": "CDS_3976", - "location": [ - [ - "NC_000913", - 4274125, - "+", - 537 - ] - ], - "md5": "59228137841555d721be84fd4c2cec96", - "parent_gene": "", - "protein_md5": "51aaf3dcb27be7b8784c06c1895d0b3c", - "protein_translation": "MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQMLGGRQGGGAPAGGNIGGGQPQGGWGQPQQPQGGNQFSGGAQSRPQQSAPAAPSNEPPMDFDDDIPF", - "protein_translation_length": 178, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111681" - ], - [ - "gene_synonym", - "GeneID:948569" - ], - [ - "gene_synonym", - "yjcB" - ], - [ - "gene_synonym", - "NP_418484.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32700" - ], - [ - "gene_synonym", - "JW5718" - ], - [ - "gene_synonym", - "ASAP:ABE-0013300" - ], - [ - "gene_synonym", - "ECK4052" - ], - [ - "gene_synonym", - "b4060" - ], - [ - "gene_synonym", - "EcoGene:EG11937" - ] - ], - "dna_sequence": "ATGGCTACCCTCACCACTGGCGTGGTTCTTCTTCGCTGGCAACTTCTTAGTGCCGTAATGATGTTTCTGGCCAGCACACTCAACATCCGTTTTCGTCGGTCTGATTATGTCGGGCTTGCGGTGATCAGCAGCGGTCTGGGCGTTGTTTCCGCCTGTTGGTTCGCAATGGGGTTGCTTGGCATCACAATGGCGGACATCACCGCTATCTGGCACAACATCGAGTCGGTGATGATAGAAGAGATGAATCAGACACCGCCACAATGGCCAATGATTTTGACCTGA", - "dna_sequence_length": 282, - "functions": [ - "putative inner membrane protein" - ], - "id": "CDS_3977", - "location": [ - [ - "NC_000913", - 4275041, - "-", - 282 - ] - ], - "md5": "f6294072035538ea6791bf8a60233250", - "parent_gene": "", - "protein_md5": "ac4d484f109c62b1a515953b4e3042a8", - "protein_translation": "MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISSGLGVVSACWFAMGLLGITMADITAIWHNIESVMIEEMNQTPPQWPMILT", - "protein_translation_length": 93, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948568" - ], - [ - "gene_synonym", - "ASAP:ABE-0013309" - ], - [ - "gene_synonym", - "yjcC" - ], - [ - "gene_synonym", - "NP_418485.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32701" - ], - [ - "gene_synonym", - "GI:16131887" - ], - [ - "gene_synonym", - "ECK4053" - ], - [ - "gene_synonym", - "EcoGene:EG11938" - ], - [ - "gene_synonym", - "b4061" - ], - [ - "gene_synonym", - "JW4022" - ] - ], - "dna_sequence": "ATGAGTCATCGTGCACGACACCAATTACTGGCGTTGCCGGGCATTATCTTTTTAGTTCTCTTTCCCATCATTCTTTCGCTATGGATTGCCTTCCTTTGGGCAAAATCAGAAGTGAATAATCAGCTCCGAACCTTTGCTCAACTGGCACTGGATAAATCCGAGCTGGTCATTCGCCAGGCAGATTTAGTGAGCGATGCAGCTGAACGCTATCAGGGGCAAGTTTGCACTCCAGCCCATCAAAAGCGAATGTTGAATATTATTCGTGGCTATCTTTATATTAATGAATTGATCTATGCCCGTGATAACCATTTTTTATGCTCATCGCTGATAGCGCCTGTAAACGGCTATACGATTGCACCGGCCGATTATAAGCGTGAACCTAACGTTTCTATCTATTATTACCGCGATACGCCTTTTTTCTCTGGCTATAAAATGACCTATATGCAGCGGGGAAATTATGTGGCGGTTATCAACCCTCTCTTCTGGAGTGAAGTGATGTCTGATGACCCGACATTGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAACGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACAAAACTATTTATCTCCCAAACGTAAATTGCAACGCGCCCTCGAAAAACATCAACTTTGTCTTTATTACCAGCCAATAATCGATATCAAAACAGAAAAATGTATCGGCGCTGAAGCGTTGTTACGTTGGCCTGGTGAGCAGGGGCAAATAATGAATCCGGCAGAGTTTATTCCGCTGGCAGAAAAGGAGGGGATGATAGAACAGATAACTGATTATGTTATTGATAATGTCTTCCGCGATCTGGGCGATTACCTGGCAACACATGCAGATCGCTATGTTTCTATTAACCTGTCGGCCTCCGATTTTCATACGTCACGGTTGATAGCGCGAATCAATCAGAAAACAGAGCAATACGCGGTGCGTCCGCAGCAAATTAAATTTGAAGTGACTGAGCATGCATTTCTTGATGTTGACAAAATGACGCCGATTATTCTGGCTTTCCGCCAGGCAGGTTACGAAGTGGCAATTGATGATTTTGGTATTGGCTACTCTAACTTGCATAACCTTAAATCATTGAATGTCGATATTTTGAAAATCGACAAATCGTTTGTTGAAACGCTGACCACCCACAAAACCAGTCATTTGATTGCGGAACACATCATCGAGCTGGCGCACAGCCTGGGGTTAAAAACGATCGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAA", - "dna_sequence_length": 1587, - "functions": [ - "putative membrane-anchored cyclic-di-GMP phosphodiesterase" - ], - "id": "CDS_3978", - "location": [ - [ - "NC_000913", - 4275471, - "+", - 1587 - ] - ], - "md5": "e0267bbf72ab8d4cc712e13300933551", - "parent_gene": "", - "protein_md5": "1e90af2a760a07849fb213a40f495859", - "protein_translation": "MSHRARHQLLALPGIIFLVLFPIILSLWIAFLWAKSEVNNQLRTFAQLALDKSELVIRQADLVSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYARDNHFLCSSLIAPVNGYTIAPADYKREPNVSIYYYRDTPFFSGYKMTYMQRGNYVAVINPLFWSEVMSDDPTLQWGVYDTVTKTFFSLSKEASAATFSPLIHLKDLTVQRNGYLYATVYSTKRPIAAIVATSYQRLITHFYNHLIFALPAGILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYYQPIIDIKTEKCIGAEALLRWPGEQGQIMNPAEFIPLAEKEGMIEQITDYVIDNVFRDLGDYLATHADRYVSINLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFLDVDKMTPIILAFRQAGYEVAIDDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIAEHIIELAHSLGLKTIAEGVETEEQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQLPARELTRGQ", - "protein_translation_length": 528, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948567" - ], - [ - "gene_synonym", - "ASAP:ABE-0013311" - ], - [ - "gene_synonym", - "EcoGene:EG10958" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9E2" - ], - [ - "gene_synonym", - "GI:16131888" - ], - [ - "gene_synonym", - "soxS" - ], - [ - "gene_synonym", - "JW4023" - ], - [ - "gene_synonym", - "b4062" - ], - [ - "gene_synonym", - "NP_418486.1" - ], - [ - "gene_synonym", - "ECK4054" - ] - ], - "dna_sequence": "ATGTCCCATCAGAAAATTATTCAGGATCTTATCGCATGGATTGACGAGCATATTGACCAGCCGCTTAACATTGATGTAGTCGCAAAAAAATCAGGCTATTCAAAGTGGTACTTGCAACGAATGTTCCGCACGGTGACGCATCAGACGCTTGGCGATTACATTCGCCAACGCCGCCTGTTACTGGCCGCCGTTGAGTTGCGCACCACCGAGCGTCCGATTTTTGATATCGCAATGGACCTGGGTTATGTCTCGCAGCAGACCTTCTCCCGCGTTTTCCGTCGGCAGTTTGATCGCACTCCCAGCGATTATCGCCACCGCCTGTAA", - "dna_sequence_length": 324, - "functions": [ - "superoxide response regulon transcriptional activator", - "autoregulator" - ], - "id": "CDS_3979", - "location": [ - [ - "NC_000913", - 4277383, - "-", - 324 - ] - ], - "md5": "4e123c4a71129ec7bef05b29a948a9e2", - "parent_gene": "", - "protein_md5": "777af84098a120aab0a33c6cb4269d71", - "protein_translation": "MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSDYRHRL", - "protein_translation_length": 107, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "marC" - ], - [ - "gene_synonym", - "ASAP:ABE-0013316" - ], - [ - "gene_synonym", - "GeneID:948566" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACS2" - ], - [ - "gene_synonym", - "EcoGene:EG10957" - ], - [ - "gene_synonym", - "GI:16131889" - ], - [ - "gene_synonym", - "soxR" - ], - [ - "gene_synonym", - "b4063" - ], - [ - "gene_synonym", - "NP_418487.1" - ], - [ - "gene_synonym", - "JW4024" - ], - [ - "gene_synonym", - "ECK4055" - ] - ], - "dna_sequence": "ATGGAAAAGAAATTACCCCGCATTAAAGCGCTGCTAACCCCCGGCGAAGTGGCGAAACGCAGCGGTGTGGCGGTATCGGCGCTGCATTTCTATGAAAGTAAAGGGTTGATTACCAGTATCCGTAACAGCGGCAATCAGCGGCGATATAAACGTGATGTGTTGCGATATGTTGCAATTATCAAAATTGCTCAGCGTATTGGCATTCCGCTGGCGACCATTGGTGAAGCGTTTGGCGTGTTGCCCGAAGGGCATACGTTAAGTGCGAAAGAGTGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCGGCGCATTCATACCTTAGTGGCGCTGCGTGACGAACTGGACGGATGTATTGGTTGTGGCTGCCTTTCGCGCAGTGATTGCCCGTTGCGTAACCCGGGCGACCGCTTAGGAGAAGAAGGTACCGGCGCACGCTTGCTGGAAGATGAACAAAACTAA", - "dna_sequence_length": 465, - "functions": [ - "redox-sensitive transcriptional activator of soxS", - "autorepressor" - ], - "id": "CDS_3980", - "location": [ - [ - "NC_000913", - 4277469, - "+", - 465 - ] - ], - "md5": "ca5e75100fa5b00aa04d15c844d868dd", - "parent_gene": "", - "protein_md5": "a1a3f0ca97e2d301588bead4f4b7ffac", - "protein_translation": "MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYKRDVLRYVAIIKIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN", - "protein_translation_length": 154, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjcD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF52" - ], - [ - "gene_synonym", - "ASAP:ABE-0013319" - ], - [ - "gene_synonym", - "NP_418488.1" - ], - [ - "gene_synonym", - "ECK4057" - ], - [ - "gene_synonym", - "GeneID:948565" - ], - [ - "gene_synonym", - "EcoGene:EG11939" - ], - [ - "gene_synonym", - "GI:16131890" - ], - [ - "gene_synonym", - "ghxP" - ], - [ - "gene_synonym", - "JW4025" - ], - [ - "gene_synonym", - "b4064" - ] - ], - "dna_sequence": "ATGTCTACGCCATCAGCGCGTACCGGCGGTTCACTCGACGCCTGGTTTAAAATTTCACAACGTGGAAGCACTGTCCGTCAGGAAGTGGTTGCCGGGTTAACAACGTTTCTGGCGATGGTCTACTCGGTCATCGTCGTTCCAGGTATGTTGGGTAAAGCAGGCTTCCCGCCTGCGGCAGTTTTCGTTGCAACCTGTCTGGTTGCCGGACTCGGTTCTATCGTGATGGGTCTGTGGGCTAATCTGCCGTTGGCGATTGGTTGCGCCATCTCCCTGACAGCGTTTACCGCATTCAGCCTGGTGCTGGGGCAACATATTAGCGTACCTGTCGCGCTGGGTGCCGTGTTCCTGATGGGTGTGCTGTTTACGGTAATTTCTGCCACGGGTATCCGTAGCTGGATTTTGCGCAACTTGCCTCACGGTGTGGCGCACGGCACGGGGATTGGTATCGGTCTGTTCCTGCTGCTCATTGCCGCTAACGGTGTCGGTCTGGTGATTAAAAACCCGCTTGATGGTCTGCCCGTTGCGCTGGGTGATTTCGCGACCTTCCCGGTGATTATGTCACTGGTAGGTCTGGCGGTGATCATCGGCCTGGAAAAACTGAAAGTCCCTGGTGGCATTCTGCTGACCATTATCGGTATCTCAATTGTCGGTTTGATCTTCGATCCTAACGTCCATTTCTCCGGCGTTTTCGCCATGCCTTCATTGAGCGATGAAAACGGCAATTCACTGATTGGCAGCCTGGACATTATGGGCGCGCTGAATCCTGTAGTCCTGCCAAGCGTTCTGGCGCTGGTGATGACGGCAGTATTTGATGCCACCGGAACTATCCGTGCCGTCGCCGGCCAGGCGAACCTGCTGGATAAAGATGGGCAGATCATCGACGGTGGGAAAGCACTGACCACTGACTCCATGAGCAGCGTTTTCTCTGGCCTGGTGGGTGCGGCTCCGGCAGCGGTATACATCGAGTCTGCGGCGGGTACGGCGGCGGGCGGTAAAACCGGTTTGACGGCTATCACCGTTGGCGTGCTGTTCCTCCTGATTCTGTTCCTCTCTCCGCTCTCTTACCTCGTTCCGGGGTATGCAACGGCTCCGGCGCTGATGTACGTTGGCCTGCTGATGCTGAGCAACGTGGCGAAAATCGACTTTGCTGATTTTGTTGATGCGATGGCGGGTCTGGTTACGGCTGTATTCATCGTGCTGACCTGTAACATCGTAACAGGCATCATGATCGGCTTCGCGACTCTGGTGATTGGTCGTCTGGTTTCCGGCGAATGGCGCAAGTTGAACATCGGTACGGTCGTTATCGCCGTGGCGCTGGTGACCTTCTATGCGGGTGGCTGGGCTATCTAA", - "dna_sequence_length": 1350, - "functions": [ - "guanine/hypoxanthine permease, high affinity", - "guanine/hypoxanthine:H+ symporter" - ], - "id": "CDS_3981", - "location": [ - [ - "NC_000913", - 4278479, - "+", - 1350 - ] - ], - "md5": "7a57926717f12017a0cefb9f2b756f2b", - "parent_gene": "", - "protein_md5": "2c87aa08ee2ab8b82c0df6ec510cff2c", - "protein_translation": "MSTPSARTGGSLDAWFKISQRGSTVRQEVVAGLTTFLAMVYSVIVVPGMLGKAGFPPAAVFVATCLVAGLGSIVMGLWANLPLAIGCAISLTAFTAFSLVLGQHISVPVALGAVFLMGVLFTVISATGIRSWILRNLPHGVAHGTGIGIGLFLLLIAANGVGLVIKNPLDGLPVALGDFATFPVIMSLVGLAVIIGLEKLKVPGGILLTIIGISIVGLIFDPNVHFSGVFAMPSLSDENGNSLIGSLDIMGALNPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIIDGGKALTTDSMSSVFSGLVGAAPAAVYIESAAGTAAGGKTGLTAITVGVLFLLILFLSPLSYLVPGYATAPALMYVGLLMLSNVAKIDFADFVDAMAGLVTAVFIVLTCNIVTGIMIGFATLVIGRLVSGEWRKLNIGTVVIAVALVTFYAGGWAI", - "protein_translation_length": 449, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjcE" - ], - [ - "gene_synonym", - "GeneID:948577" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32703" - ], - [ - "gene_synonym", - "ECK4058" - ], - [ - "gene_synonym", - "NP_418489.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013323" - ], - [ - "gene_synonym", - "b4065" - ], - [ - "gene_synonym", - "GI:16131891" - ], - [ - "gene_synonym", - "EcoGene:EG11940" - ], - [ - "gene_synonym", - "JW4026" - ] - ], - "dna_sequence": "ATGGAAATCTTCTTCACCATACTGATAATGACCCTCGTGGTCTCGCTGTCCGGGGTGGTCACTCGTGTCATGCCCTTTCAGATCCCGCTTCCGCTTATGCAAATCGCCATCGGTGCGCTACTGGCGTGGCCGACGTTTGGTTTGCATGTGGAGTTTGATCCTGAACTCTTTTTAGTCTTGTTTATCCCGCCGTTGCTGTTCGCTGATGGCTGGAAAACGCCGACCCGTGAATTTCTCGAACATGGTCGAGAGATTTTCGGCCTCGCGCTGGCGCTGGTGGTGGTCACCGTGGTCGGCATTGGCTTCCTTATTTACTGGGTGGTGCCGGGCATTCCGCTGATCCCTGCCTTTGCGCTGGCGGCGGTGCTTTCTCCGACCGATGCTGTGGCGCTCTCCGGGATTGTTGGCGAAGGGCGCATCCCGAAAAAAATCATGGGCATTTTGCAGGGCGAAGCGTTGATGAATGACGCCTCCGGTCTGGTGTCGTTGAAGTTTGCCGTAGCAGTGGCGATGGGGACGATGATCTTCACCGTCGGCGGTGCGACGGTCGAATTTATGAAAGTAGCCATTGGCGGTATTCTCGCCGGTTTTGTGGTGAGCTGGCTGTACGGTCGCTCGCTGCGATTCCTCAGCCGCTGGGGCGGTGATGAACCCGCGACGCAGATCGTCCTGCTGTTCCTGCTGCCATTCGCTTCTTATCTGATTGCCGAACATATTGGCGTTTCCGGCATCCTCGCTGCGGTTGCCGCCGGGATGACCATCACCCGCTCCGGTGTGATGCGCCGTGCGCCGCTGGCAATGCGCCTGCGTGCAAACAGCACCTGGGCGATGCTGGAATTTGTCTTTAACGGCATGGTGTTCCTGCTGTTAGGTCTGCAGCTGCCGGGTATTCTGGAGACGTCGCTGATGGCAGCAGAAATCGACCCTAACGTCGAAATCTGGATGCTGTTTACCAATATTATTCTGATATATGCGGCGCTGATGCTGGTCCGTTTCGGCTGGCTGTGGACGATGAAAAAGTTCAGCAACCGCTTCCTGAAGAAGAAGCCGATGGAGTTTGGTTCGTGGACCACACGAGAAATCCTGATCGCGTCTTTCGCCGGGGTGCGTGGGGCGATCACTCTGGCCGGTGTGCTCTCTATCCCGCTGCTCTTGCCGGATGGTAACGTCTTCCCGGCGCGCTATGAGCTGGTGTTCCTGGCGGCTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCAGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACGTAACGACGTTGAAAGTTCCGTGCAGGAAGAGAACCTTGAGCGTCGCTTCCGTCTGGCGGCATTGCGTTCTGAACGTGCTGAACTTTACCACCTGCGCGCCACACGGGAGATCAGCAACGAAACGCTGCAAAAATTACTGCACGATCTCGATTTGCTTGAAGCGTTGCTAATTGAGGAAAATCAGTAA", - "dna_sequence_length": 1650, - "functions": [ - "putative cation/proton antiporter" - ], - "id": "CDS_3982", - "location": [ - [ - "NC_000913", - 4279980, - "+", - 1650 - ] - ], - "md5": "5e7ce8bca699303212e07b37d6b1ea2c", - "parent_gene": "", - "protein_md5": "5297cc62ebc9d01aed079cf8878d8337", - "protein_translation": "MEIFFTILIMTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWPTFGLHVEFDPELFLVLFIPPLLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGFLIYWVVPGIPLIPAFALAAVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGLVSLKFAVAVAMGTMIFTVGGATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEPATQIVLLFLLPFASYLIAEHIGVSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWAMLEFVFNGMVFLLLGLQLPGILETSLMAAEIDPNVEIWMLFTNIILIYAALMLVRFGWLWTMKKFSNRFLKKKPMEFGSWTTREILIASFAGVRGAITLAGVLSIPLLLPDGNVFPARYELVFLAAGVILFSLFVGVVMLPILLQHIEVADHSQQLKEERIARAATAEVAIVAIQKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVESSVQEENLERRFRLAALRSERAELYHLRATREISNETLQKLLHDLDLLEALLIEENQ", - "protein_translation_length": 549, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjcF" - ], - [ - "gene_synonym", - "EcoGene:EG11941" - ], - [ - "gene_synonym", - "GeneID:948576" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32704" - ], - [ - "gene_synonym", - "ASAP:ABE-0013325" - ], - [ - "gene_synonym", - "ECK4059" - ], - [ - "gene_synonym", - "JW4027" - ], - [ - "gene_synonym", - "b4066" - ], - [ - "gene_synonym", - "GI:16131892" - ], - [ - "gene_synonym", - "NP_418490.1" - ] - ], - "dna_sequence": "ATGCGCTATAATGGTTTAAATAATATGTTTTTCCCTCTTTGCCTGATTAACGATAACCACTCTGTCACAAGTCCATCACATACAAAGAAAACAAAATCAGATAATTACAGCAAACATCATAAAAACACGTTAATTGACAATAAAGCCCTCTCTCTTTTCAAAATGGATGATCATGAAAAAGTGATAGGCTTGATTCAGAAAATGAAAAGAATTTATGATAGTTTACCATCAGGAAAAATCACGAAAGAAACGGACAGGAAAATACATAAATATTTTATAGATATAGCTTCACATGCAAATAATAAATGTGACGATAGAATTACGAGAAGAGTTTACCTTAATAAAGATAAGGAAGTGTCAATTAAGGTGGTATATTTTATAAATAATGTCACCGTCCATAATAATACTATCGAAATCCCACAGACAGTAAATGGTGGTTACGATTTTTCACACCTTAGCCTGAAAGGTATCGTGATTAAAGATGAAGATTTATCCAATTCGAATTTTGCAGGTTGCAGACTACAAAACGCTATTTTTCAGGACTGTAATATGTATAAAACGAATTTTAATTTCGCCATAATGGAAAAAATACTTTTTGATAATTGTATTCTCGATGACTCAAATTTCGCTCAGATAAAAATGACTGACGGAACTCTAAATTCATGTTCCGCTATGCATGTTCAATTCTACAATGCAACAATGAATAGAGCCAATATTAAAAATACCTTCCTTGATTATTCAAATTTTTATATGGCATACATGGCTGAGGTAAATCTTTATAAAGTAATAGCGCCATATATTAATTTATTTAGAGCCGACCTTAGCTTCTCTAAACTTGATTTAATTAACTTTGAACATGCTGATCTGTCTCGTGTCAACCTGAATAAAGCAACCCTCCAGAATATAAACTTAATTGATAGCAAACTCTTTTTTACGCGGTTAACAAATACGTTCCTCGAAATGGTTATATGTACCGACTCTAATATGGCTAATGTTAATTTTAATAATGCCAATTTAAGCAATTGCCATTTCAACTGTTCTGTTTTAACAAAAGCCTGGATGTTTAATATCCGTCTCTATCGTGTTAATTTCGATGAGGCTAGCGTCCAGGGAATGGGTATTACCATTCTCCGTGGTGAGGAAAATATCTCCATTAATAGTGATATCCTGGTAACACTACAGAAATTCTTTGAAGAAGATTGTGCCACTCATACTGGCATGTCACAAACTGAGGATAATCTTCATGCAGTCGCTATGAAGATTACTGCAGATATTATGCAAGATGCAGATTGA", - "dna_sequence_length": 1293, - "functions": [ - "pentapeptide repeats protein" - ], - "id": "CDS_3983", - "location": [ - [ - "NC_000913", - 4283075, - "-", - 1293 - ] - ], - "md5": "0b1f3e5089b11ee6916ffd20a7296525", - "parent_gene": "", - "protein_md5": "37cae934a2da9ec0167cd89666d4cdce", - "protein_translation": "MRYNGLNNMFFPLCLINDNHSVTSPSHTKKTKSDNYSKHHKNTLIDNKALSLFKMDDHEKVIGLIQKMKRIYDSLPSGKITKETDRKIHKYFIDIASHANNKCDDRITRRVYLNKDKEVSIKVVYFINNVTVHNNTIEIPQTVNGGYDFSHLSLKGIVIKDEDLSNSNFAGCRLQNAIFQDCNMYKTNFNFAIMEKILFDNCILDDSNFAQIKMTDGTLNSCSAMHVQFYNATMNRANIKNTFLDYSNFYMAYMAEVNLYKVIAPYINLFRADLSFSKLDLINFEHADLSRVNLNKATLQNINLIDSKLFFTRLTNTFLEMVICTDSNMANVNFNNANLSNCHFNCSVLTKAWMFNIRLYRVNFDEASVQGMGITILRGEENISINSDILVTLQKFFEEDCATHTGMSQTEDNLHAVAMKITADIMQDAD", - "protein_translation_length": 430, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948575" - ], - [ - "gene_synonym", - "ECK4060" - ], - [ - "gene_synonym", - "yjcG" - ], - [ - "gene_synonym", - "actP" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32705" - ], - [ - "gene_synonym", - "JW4028" - ], - [ - "gene_synonym", - "NP_418491.1" - ], - [ - "gene_synonym", - "EcoGene:EG11942" - ], - [ - "gene_synonym", - "ASAP:ABE-0013328" - ], - [ - "gene_synonym", - "b4067" - ], - [ - "gene_synonym", - "GI:16131893" - ] - ], - "dna_sequence": "ATGAAAAGAGTTCTGACGGCGCTTGCCGCCACACTCCCTTTCGCAGCTAACGCCGCGGATGCTATTAGCGGGGCCGTAGAGCGCCAGCCAACGAACTGGCAGGCGATTATTATGTTCCTGATTTTCGTCGTGTTTACGCTCGGCATTACCTACTGGGCATCAAAACGCGTACGTTCTCGTAGCGACTACTACACCGCAGGCGGCAATATCACTGGCTTCCAGAACGGGCTGGCGATTGCCGGGGACTATATGTCCGCCGCCTCATTCTTGGGGATCTCCGCGCTGGTGTTTACCTCCGGCTATGACGGCTTAATTTACTCGCTGGGCTTCCTGGTGGGCTGGCCGATCATTTTGTTCCTGATTGCCGAACGTCTGCGTAACCTGGGGCGCTACACCTTTGCCGATGTGGCCTCTTACCGTCTGAAACAAGGGCCGATTCGTATTCTTTCGGCCTGTGGTTCTCTGGTGGTGGTGGCGCTTTACCTTATCGCCCAGATGGTGGGCGCAGGTAAACTGATCGAGCTGCTGTTTGGCCTTAACTATCACATTGCGGTGGTGCTGGTCGGCGTGCTGATGATGATGTACGTCCTGTTCGGCGGCATGCTGGCGACCACCTGGGTGCAAATTATCAAAGCCGTGCTGTTGCTGTTCGGTGCCAGCTTTATGGCCTTTATGGTGATGAAACACGTCGGCTTTAGCTTCAACAATCTGTTCAGTGAAGCGATGGCGGTACACCCGAAAGGTGTCGACATCATGAAGCCGGGCGGGCTGGTGAAAGATCCGATCTCCGCGCTCTCTCTGGGTCTGGGACTGATGTTTGGTACGGCGGGCTTGCCGCACATTCTGATGCGCTTCTTTACAGTCAGCGATGCCCGCGAAGCACGTAAGAGCGTGTTCTACGCCACCGGGTTTATGGGCTACTTCTATATTCTGACCTTTATTATCGGCTTCGGCGCGATCATGCTGGTTGGTGCGAATCCGGAATATAAAGACGCGGCGGGCCATCTGATTGGTGGTAACAACATGGCGGCCGTTCACCTGGCGAATGCAGTGGGCGGCAACCTGTTCCTCGGTTTTATTTCAGCGGTTGCTTTCGCCACTATCCTCGCGGTGGTTGCGGGTCTGACGCTGGCGGGCGCATCCGCGGTTTCGCATGACTTGTACGCTAACGTCTTCAAAAAAGGCGCGACCGAACGTGAAGAGCTGCGGGTATCAAAAATCACCGTACTGATCCTCGGCGTGATTGCGATTATCCTCGGCGTGCTGTTTGAGAATCAGAACATCGCCTTTATGGTGGGGCTGGCGTTTGCCATCGCGGCGAGCTGTAACTTCCCGATCATTCTGCTTTCTATGTACTGGTCGAAACTGACCACGCGTGGCGCGATGATGGGTGGCTGGCTGGGGCTGATTACCGCAGTAGTACTGATGATCCTCGGCCCGACGATTTGGGTACAGATCCTTGGTCACGAAAAAGCCATCTTCCCGTATGAATACCCGGCGCTGTTCTCTATCACCGTGGCATTCCTCGGCATCTGGTTCTTCTCGGCAACCGATAACTCAGCGGAAGGCGCGCGTGAGCGTGAACTGTTCCGCGCGCAGTTTATCCGCTCCCAGACCGGCTTTGGCGTTGAGCAAGGCCGCGCGCATTAA", - "dna_sequence_length": 1650, - "functions": [ - "acetate transporter" - ], - "id": "CDS_3984", - "location": [ - [ - "NC_000913", - 4284902, - "-", - 1650 - ] - ], - "md5": "fe7b3c35ee19aee598984d20886a8425", - "parent_gene": "", - "protein_md5": "09027cec46ad382a3a6658eb9b92b207", - "protein_translation": "MKRVLTALAATLPFAANAADAISGAVERQPTNWQAIIMFLIFVVFTLGITYWASKRVRSRSDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYDGLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVALYLIAQMVGAGKLIELLFGLNYHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFGASFMAFMVMKHVGFSFNNLFSEAMAVHPKGVDIMKPGGLVKDPISALSLGLGLMFGTAGLPHILMRFFTVSDAREARKSVFYATGFMGYFYILTFIIGFGAIMLVGANPEYKDAAGHLIGGNNMAAVHLANAVGGNLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYANVFKKGATEREELRVSKITVLILGVIAIILGVLFENQNIAFMVGLAFAIAASCNFPIILLSMYWSKLTTRGAMMGGWLGLITAVVLMILGPTIWVQILGHEKAIFPYEYPALFSITVAFLGIWFFSATDNSAEGARERELFRAQFIRSQTGFGVEQGRAH", - "protein_translation_length": 549, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948574" - ], - [ - "gene_synonym", - "ECK4061" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF54" - ], - [ - "gene_synonym", - "yjcH" - ], - [ - "gene_synonym", - "NP_418492.1" - ], - [ - "gene_synonym", - "JW4029" - ], - [ - "gene_synonym", - "b4068" - ], - [ - "gene_synonym", - "ASAP:ABE-0013330" - ], - [ - "gene_synonym", - "GI:16131894" - ], - [ - "gene_synonym", - "EcoGene:EG11943" - ] - ], - "dna_sequence": "ATGAATGGCACTATTTATCAGCGGATAGAAGACAATGCGCATTTCAGGGAGTTAGTCGAAAAACGGCAACGGTTTGCCACCATCCTGTCGATTATTATGCTGGCAGTTTATATCGGCTTTATTTTACTGATCGCCTTCGCGCCCGGCTGGCTGGGCACGCCGCTGAATCCGAACACCAGCGTCACACGCGGTATTCCAATTGGTGTTGGAGTGATTGTGATCTCCTTTGTTCTCACCGGTATCTACATCTGGCGGGCGAACGGCGAATTCGACCGTCTTAATAATGAAGTCCTGCATGAGGTACAAGCATCATGA", - "dna_sequence_length": 315, - "functions": [ - "DUF485 family inner membrane protein" - ], - "id": "CDS_3985", - "location": [ - [ - "NC_000913", - 4285213, - "-", - 315 - ] - ], - "md5": "7ffac60ec9e851690a1d49c3eddc70cd", - "parent_gene": "", - "protein_md5": "f0ca57b7d8601f2a5ccdf27978c77e4d", - "protein_translation": "MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQAS", - "protein_translation_length": 104, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4062" - ], - [ - "gene_synonym", - "b4069" - ], - [ - "gene_synonym", - "EcoGene:EG11448" - ], - [ - "gene_synonym", - "GeneID:948572" - ], - [ - "gene_synonym", - "acs" - ], - [ - "gene_synonym", - "NP_418493.1" - ], - [ - "gene_synonym", - "yfaC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27550" - ], - [ - "gene_synonym", - "GI:16131895" - ], - [ - "gene_synonym", - "JW4030" - ], - [ - "gene_synonym", - "acsA" - ], - [ - "gene_synonym", - "ASAP:ABE-0013337" - ] - ], - "dna_sequence": "ATGAGCCAAATTCACAAACACACCATTCCTGCCAACATCGCAGACCGTTGCCTGATAAACCCTCAGCAGTACGAGGCGATGTATCAACAATCTATTAACGTACCTGATACCTTCTGGGGCGAACAGGGAAAAATTCTTGACTGGATCAAACCTTACCAGAAGGTGAAAAACACCTCCTTTGCCCCCGGTAATGTGTCCATTAAATGGTACGAGGACGGCACGCTGAATCTGGCGGCAAACTGCCTTGACCGCCATCTGCAAGAAAACGGCGATCGTACCGCCATCATCTGGGAAGGCGACGACGCCAGCCAGAGCAAACATATCAGCTATAAAGAGCTGCACCGCGACGTCTGCCGCTTCGCCAATACCCTGCTCGAGCTGGGCATTAAAAAAGGTGATGTGGTGGCGATTTATATGCCGATGGTGCCGGAAGCCGCGGTTGCGATGCTGGCCTGCGCCCGCATTGGCGCGGTGCATTCGGTGATTTTCGGCGGCTTCTCGCCGGAAGCCGTTGCCGGGCGCATTATTGATTCCAACTCACGACTGGTGATCACTTCCGACGAAGGTGTGCGTGCCGGGCGCAGTATTCCGCTGAAGAAAAACGTTGATGACGCGCTGAAAAACCCGAACGTCACCAGCGTAGAGCATGTGGTGGTACTGAAGCGTACTGGCGGGAAAATTGACTGGCAGGAAGGGCGCGACCTGTGGTGGCACGACCTGGTTGAGCAAGCGAGCGATCAGCACCAGGCGGAAGAGATGAACGCCGAAGATCCGCTGTTTATTCTCTACACCTCCGGTTCTACCGGTAAGCCAAAAGGTGTGCTGCATACTACCGGCGGTTATCTGGTGTACGCGGCGCTGACCTTTAAATATGTCTTTGATTATCATCCGGGTGATATCTACTGGTGCACCGCCGATGTGGGCTGGGTGACCGGACACAGTTACTTGCTGTACGGCCCGCTGGCCTGCGGTGCGACCACGCTGATGTTTGAAGGCGTACCCAACTGGCCGACGCCTGCCCGTATGGCGCAGGTGGTGGACAAGCATCAGGTCAATATTCTCTATACCGCACCCACGGCGATCCGCGCGCTGATGGCGGAAGGCGATAAAGCGATCGAAGGCACCGACCGTTCGTCGCTGCGCATTCTCGGTTCCGTGGGCGAGCCAATTAACCCGGAAGCGTGGGAGTGGTACTGGAAAAAAATCGGCAACGAGAAATGTCCGGTGGTCGATACCTGGTGGCAGACCGAAACCGGCGGTTTCATGATCACCCCGCTGCCTGGCGCTACCGAGCTGAAAGCCGGTTCGGCAACACGTCCGTTCTTCGGCGTGCAACCGGCGCTGGTCGATAACGAAGGTAACCCGCTGGAGGGGGCCACCGAAGGTAGCCTGGTAATCACCGACTCCTGGCCGGGTCAGGCGCGTACGCTGTTTGGCGATCACGAACGTTTTGAACAGACCTACTTCTCCACCTTCAAAAATATGTATTTCAGCGGCGACGGCGCGCGTCGCGATGAAGATGGCTATTACTGGATAACCGGGCGTGTGGACGACGTGCTGAACGTCTCCGGTCACCGTCTGGGGACGGCAGAGATTGAGTCGGCGCTGGTGGCGCATCCGAAGATTGCCGAAGCCGCCGTAGTAGGTATTCCGCACAATATTAAAGGTCAGGCGATCTACGCCTACGTCACGCTTAATCACGGGGAGGAACCGTCACCAGAACTGTACGCAGAAGTCCGCAACTGGGTGCGTAAAGAGATTGGCCCGCTGGCGACGCCAGACGTGCTGCACTGGACCGACTCCCTGCCTAAAACCCGCTCCGGCAAAATTATGCGCCGTATTCTGCGCAAAATTGCGGCGGGCGATACCAGCAACCTGGGCGATACCTCGACGCTTGCCGATCCTGGCGTAGTCGAGAAGCTGCTTGAAGAGAAGCAGGCTATCGCGATGCCATCGTAA", - "dna_sequence_length": 1959, - "functions": [ - "acetyl-CoA synthetase" - ], - "id": "CDS_3986", - "location": [ - [ - "NC_000913", - 4287371, - "-", - 1959 - ] - ], - "md5": "6c84e10d1cf6ed36d4d6c21b997d38a3", - "parent_gene": "", - "protein_md5": "3e6c64958fff1169846d0e965cdd2dfe", - "protein_translation": "MSQIHKHTIPANIADRCLINPQQYEAMYQQSINVPDTFWGEQGKILDWIKPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHLQENGDRTAIIWEGDDASQSKHISYKELHRDVCRFANTLLELGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSNSRLVITSDEGVRAGRSIPLKKNVDDALKNPNVTSVEHVVVLKRTGGKIDWQEGRDLWWHDLVEQASDQHQAEEMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMAQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGNEKCPVVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVDNEGNPLEGATEGSLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHNIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDTSNLGDTSTLADPGVVEKLLEEKQAIAMPS", - "protein_translation_length": 652, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4063" - ], - [ - "gene_synonym", - "NP_418494.1" - ], - [ - "gene_synonym", - "EcoGene:EG11781" - ], - [ - "gene_synonym", - "ASAP:ABE-0013342" - ], - [ - "gene_synonym", - "nrfA" - ], - [ - "gene_synonym", - "b4070" - ], - [ - "gene_synonym", - "JW4031" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABK9" - ], - [ - "gene_synonym", - "GI:16131896" - ], - [ - "gene_synonym", - "GeneID:948571" - ] - ], - "dna_sequence": "ATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTGTAACTGTGGAAGCGAAGAATGAAACCTTTGCCCCGCAGCATCCCGATCAATATCTCTCCTGGAAAGCCACCTCGGAACAGTCAGAGCGTGTTGACGCCCTGGCGGAAGATCCACGGCTGGTGATCCTGTGGGCGGGGTATCCCTTCTCGCGCGATTACAACAAGCCGCGTGGACATGCTTTTGCTGTGACCGATGTGCGTGAAACCCTGCGTACCGGTGCGCCGAAAAACGCTGAAGATGGTCCGCTACCGATGGCATGCTGGAGTTGTAAAAGCCCGGATGTGGCGCGTCTGATCCAGAAAGACGGCGAAGATGGCTACTTCCACGGTAAATGGGCGCGCGGCGGTCCGGAAATCGTCAACAACTTAGGTTGTGCCGATTGCCATAACACCGCCTCTCCAGAGTTCGCCAAAGGCAAACCGGAGTTAACCCTTTCCCGTCCGTATGCGGCTCGCGCGATGGAAGCCATTGGTAAACCTTTTGAGAAAGCCGGACGTTTCGACCAGCAATCGATGGTTTGCGGTCAGTGCCATGTGGAGTATTACTTCGACGGCAAAAACAAAGCGGTTAAATTCCCGTGGGATGACGGCATGAAAGTCGAAAATATGGAGCAGTATTACGACAAAATTGCCTTCTCTGACTGGACTAACTCCCTGTCGAAAACGCCAATGCTGAAAGCGCAGCACCCGGAATATGAAACCTGGACAGCGGGCATTCACGGTAAAAACAACGTGACCTGTATCGACTGCCATATGCCAAAAGTGCAGAACGCCGAAGGCAAACTCTACACCGACCATAAAATTGGTAATCCGTTTGATAACTTCGCCCAGACTTGTGCGAACTGCCATACCCAGGACAAAGCTGCCTTGCAAAAAGTGGTCGCGGAACGTAAGCAGTCGATTAACGACCTGAAAATCAAGGTTGAAGATCAACTGGTTCACGCTCACTTCGAAGCGAAAGCAGCGCTGGATGCAGGCGCGACGGAAGCTGAAATGAAGCCAATTCAGGACGATATCCGTCATGCCCAGTGGCGCTGGGATCTGGCGATCGCTTCCCACGGCATTCATATGCACGCACCGGAAGAAGGTTTACGGATGCTCGGTACGGCGATGGATAAAGCGGCGGATGCACGCACCAAACTGGCGCGCCTGCTGGCGACCAAAGGCATCACCCATGAAATCCAGATCCCGGATATCTCAACCAAAGAGAAAGCCCAGCAGGCCATTGGCCTGAACATGGAACAAATCAAGGCCGAGAAGCAGGACTTCATCAAAACGGTGATCCCGCAGTGGGAAGAACAGGCACGTAAAAACGGTCTGTTAAGCCAATAA", - "dna_sequence_length": 1437, - "functions": [ - "nitrite reductase, formate-dependent, cytochrome" - ], - "id": "CDS_3987", - "location": [ - [ - "NC_000913", - 4287764, - "+", - 1437 - ] - ], - "md5": "67ff530e4ae3bf237e54b4f2cfea1879", - "parent_gene": "", - "protein_md5": "e13efccbda7c00032fa306b56f27c2f1", - "protein_translation": "MTRIKINARRIFSLLIPFFFFTSVHAEQTAAPAKPVTVEAKNETFAPQHPDQYLSWKATSEQSERVDALAEDPRLVILWAGYPFSRDYNKPRGHAFAVTDVRETLRTGAPKNAEDGPLPMACWSCKSPDVARLIQKDGEDGYFHGKWARGGPEIVNNLGCADCHNTASPEFAKGKPELTLSRPYAARAMEAIGKPFEKAGRFDQQSMVCGQCHVEYYFDGKNKAVKFPWDDGMKVENMEQYYDKIAFSDWTNSLSKTPMLKAQHPEYETWTAGIHGKNNVTCIDCHMPKVQNAEGKLYTDHKIGNPFDNFAQTCANCHTQDKAALQKVVAERKQSINDLKIKVEDQLVHAHFEAKAALDAGATEAEMKPIQDDIRHAQWRWDLAIASHGIHMHAPEEGLRMLGTAMDKAADARTKLARLLATKGITHEIQIPDISTKEKAQQAIGLNMEQIKAEKQDFIKTVIPQWEEQARKNGLLSQ", - "protein_translation_length": 478, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111682" - ], - [ - "gene_synonym", - "ECK4064" - ], - [ - "gene_synonym", - "ASAP:ABE-0013344" - ], - [ - "gene_synonym", - "GeneID:948573" - ], - [ - "gene_synonym", - "nrfB" - ], - [ - "gene_synonym", - "yjcI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABL1" - ], - [ - "gene_synonym", - "EcoGene:EG11945" - ], - [ - "gene_synonym", - "JW4032" - ], - [ - "gene_synonym", - "b4071" - ], - [ - "gene_synonym", - "NP_418495.2" - ] - ], - "dna_sequence": "ATGAGCGTATTACGTTCGTTATTAACTGCCGGGGTGCTGGCGTCGGGCCTGTTGTGGAGCCTGAACGGAATTACCGCTACCCCTGCGGCGCAGGCATCTGATGATCGCTACGAAGTTACCCAGCAGCGTAACCCGGATGCCGCCTGTCTGGACTGTCATAAACCAGATACCGAAGGTATGCATGGAAAACATGCTTCCGTTATCAACCCGAATAACAAACTGCCGGTCACCTGCACCAACTGTCACGGCCAGCCATCACCGCAACACCGCGAAGGGGTGAAAGATGTGATGCGCTTTAACGAGCCGATGTACAAGGTTGGAGAGCAGAACAGCGTCTGTATGTCCTGTCATCTGCCGGAACAGTTGCAAAAAGCGTTCTGGCCGCACGATGTCCACGTAACCAAAGTGGCGTGCGCCAGCTGCCATTCCCTGCATCCACAGCAAGATACGATGCAGACGTTAAGTGACAAAGGACGGATTAAGATTTGCGTCGATTGCCACAGCGATCAGCGCACCAATCCGAACTTTAACCCGGCGTCTGTTCCGTTGCTTAAGGAGCAGCCATGA", - "dna_sequence_length": 567, - "functions": [ - "nitrite reductase, formate-dependent, penta-heme cytochrome c" - ], - "id": "CDS_3988", - "location": [ - [ - "NC_000913", - 4289245, - "+", - 567 - ] - ], - "md5": "677f1bac54806473886c7c8e65bbdac2", - "parent_gene": "", - "protein_md5": "56c2b65966dc23b88adfd8defa8ea2d7", - "protein_translation": "MSVLRSLLTAGVLASGLLWSLNGITATPAAQASDDRYEVTQQRNPDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLKEQP", - "protein_translation_length": 188, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013346" - ], - [ - "gene_synonym", - "ECK4065" - ], - [ - "gene_synonym", - "GeneID:948581" - ], - [ - "gene_synonym", - "NP_418496.1" - ], - [ - "gene_synonym", - "nrfC" - ], - [ - "gene_synonym", - "yjcJ" - ], - [ - "gene_synonym", - "EcoGene:EG11946" - ], - [ - "gene_synonym", - "GI:16131898" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAK7" - ], - [ - "gene_synonym", - "b4072" - ], - [ - "gene_synonym", - "JW4033" - ] - ], - "dna_sequence": "ATGACCTGGTCTCGTCGCCAGTTTCTCACCGGCGTCGGCGTGCTGGCAGCCGTCAGCGGCACCGCAGGGCGCGTGGTGGCGAAAACGTTGAATATCAATGGGGTGCGTTACGGCATGGTGCATGACGAGTCGTTATGCATCGGCTGTACCGCCTGTATGGATGCTTGTCGGGAAGTGAACAAGGTGCCGGAAGGCGTCTCGCGCCTGACGATTATTCGTAGCGAGCCGCAGGGCGAATTTCCTGATGTGAAATATCGCTTCTTCCGTAAGTCTTGCCAGCACTGCGATCATGCGCCGTGCGTTGACGTCTGCCCGACCGGTGCGTCTTTTCGCGATGCTGCCAGTGGGATTGTCGATGTTAATCCGGATCTCTGCGTCGGTTGTCAGTACTGCATCGCCGCCTGTCCGTACCGCGTGCGCTTTATCCATCCGGTCACGAAGACGGCGGACAAATGCGATTTCTGCCGTAAGACCAATTTGCAGGCCGGTAAGTTGCCCGCGTGCGTTGAAGCTTGCCCGACCAAGGCGCTGACGTTTGGCAATCTGGACGATCCCAACAGTGAGATTTCGCAACTGCTGCGCCAGAAGCCCACTTACCGCTACAAGCTGGCGCTGGGAACCAAACCGAAGCTGTACCGCGTACCGTTTAAATACGGGGAGGTGAGCCAATGA", - "dna_sequence_length": 672, - "functions": [ - "formate-dependent nitrite reductase, 4Fe4S subunit" - ], - "id": "CDS_3989", - "location": [ - [ - "NC_000913", - 4289808, - "+", - 672 - ] - ], - "md5": "c3d281a5d2aeb20dd6e2043d4ab1da35", - "parent_gene": "", - "protein_md5": "a06991b1dd66dc90411c3b5c494dd250", - "protein_translation": "MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDESLCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNLQAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKYGEVSQ", - "protein_translation_length": 223, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32709" - ], - [ - "gene_synonym", - "ECK4066" - ], - [ - "gene_synonym", - "GeneID:948580" - ], - [ - "gene_synonym", - "nrfD" - ], - [ - "gene_synonym", - "ASAP:ABE-0013348" - ], - [ - "gene_synonym", - "NP_418497.1" - ], - [ - "gene_synonym", - "yjcK" - ], - [ - "gene_synonym", - "GI:16131899" - ], - [ - "gene_synonym", - "EcoGene:EG11947" - ], - [ - "gene_synonym", - "b4073" - ], - [ - "gene_synonym", - "JW4034" - ] - ], - "dna_sequence": "ATGACGCAGACTTCCGCATTTCATTTTGAATCGCTGGTGTGGGACTGGCCGATTGCCATCTACCTGTTTTTGATTGGTATTTCTGCTGGTCTGGTGACGCTGGCCGTGCTGTTACGTCGCTTCTACCCGCAGGCGGGCGGTGCAGACAGTACGTTGCTGCGCACCACGCTGATTGTCGGGCCGGGCGCGGTGATCCTCGGTCTGTTGATCCTCGTCTTCCACCTGACAAGACCGTGGACCTTCTGGAAGCTGATGTTCCACTACAGTTTTACCTCGGTGATGTCGATGGGGGTGATGCTGTTTCAGCTCTACATGGTGGTGCTGGTGCTGTGGCTGGCGAAAATCTTTGAACATGATTTGCTTGCCCTGCAACAACGCTGGTTGCCGAAGCTGGGGATCGTGCAAAAGGTTCTGAGCCTGCTGACGCCCGTTCATCGCGGACTGGAAACATTGATGCTGGTGCTGGCGGTGTTGTTGGGGGCTTATACCGGCTTTCTGCTGTCGGCGCTGAAATCGTATCCGTTCCTCAATAACCCGATCCTGCCGGTGCTGTTCCTCTTCTCCGGCATCTCGTCCGGTGCGGCGGTGGCGCTGATCGCCATGGCGATACGCCAACGCAGTAACCCGCATTCCACGGAAGCGCAGTTTGTACACCGTATGGAAATCCCTGTGGTATGGGGTGAAATCTTCCTGCTGGTGGCGTTTTTTGTCGGTCTGGCGCTGGGCGATGACGGTAAAGTTCGTGCGCTGGTGGCGGCATTAGGTGGCGGTTTCTGGACGTGGTGGTTCTGGCTTGGTGTCGCCGGGCTGGGGCTGATTGTGCCAATGCTGCTCAAACCGTGGGTCAATCGCAGTTCCGGCATTCCTGCCGTGCTGGCGGCGTGTGGGGCCAGTCTGGTCGGCGTGTTGATGCTGCGCTTTTTCATTCTCTACGCCGGACAGTTGACGGTGGCGTAA", - "dna_sequence_length": 957, - "functions": [ - "formate-dependent nitrite reductase, membrane subunit" - ], - "id": "CDS_3990", - "location": [ - [ - "NC_000913", - 4290476, - "+", - 957 - ] - ], - "md5": "f25b2fade389f6daa714ee51de7a6e8b", - "parent_gene": "", - "protein_md5": "4c5f4baae01c3a4aad050156769fbd96", - "protein_translation": "MTQTSAFHFESLVWDWPIAIYLFLIGISAGLVTLAVLLRRFYPQAGGADSTLLRTTLIVGPGAVILGLLILVFHLTRPWTFWKLMFHYSFTSVMSMGVMLFQLYMVVLVLWLAKIFEHDLLALQQRWLPKLGIVQKVLSLLTPVHRGLETLMLVLAVLLGAYTGFLLSALKSYPFLNNPILPVLFLFSGISSGAAVALIAMAIRQRSNPHSTEAQFVHRMEIPVVWGEIFLLVAFFVGLALGDDGKVRALVAALGGGFWTWWFWLGVAGLGLIVPMLLKPWVNRSSGIPAVLAACGASLVGVLMLRFFILYAGQLTVA", - "protein_translation_length": 318, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013350" - ], - [ - "gene_synonym", - "ECK4067" - ], - [ - "gene_synonym", - "NP_418498.1" - ], - [ - "gene_synonym", - "yjcL" - ], - [ - "gene_synonym", - "nrfE" - ], - [ - "gene_synonym", - "GeneID:948579" - ], - [ - "gene_synonym", - "GI:16131900" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32710" - ], - [ - "gene_synonym", - "EcoGene:EG11948" - ], - [ - "gene_synonym", - "b4074" - ], - [ - "gene_synonym", - "JW4035" - ] - ], - "dna_sequence": "GTGTTGACCCCGTTGACGGCCTTCGCGGGAGTGCGGTTGCGCTGGCCTGCCATGATGCGACTCACTTGCATCGGCATTCTGGCGCAGTTCGCGCTCCTGCTGCTCGCCTTTGGCGTACTGACGTATTGTTTTCTCATCAGCGATTTCTCGGTCATTTATGTCGCGCAACATAGCTATAGCCTGCTGTCGTGGGAACTCAAGCTGGCAGCGGTGTGGGGCGGCCATGAAGGTTCGCTGCTGCTTTGGGTGCTGCTGCTTTCCGCCTGGAGCGCGCTGTTTGCCTGGCATTATCGGCAGCAAACCGATCCGCTATTTCCGCTGACGTTAGCCGTTTTATCTCTCATGCTCGCCGCACTGCTACTGTTTGTGGTGCTGTGGTCCGATCCCTTCGTGCGGATATTTCCACCAGCAATCGAAGGCCGCGATCTCAATCCGATGCTGCAACATCCCGGTCTTATCTTTCATCCACCGCTGCTTTACCTTGGCTATGGCGGTTTGATGGTAGCGGCGAGCGTGGCGCTGGCGAGTCTACTGCGCGGCGAGTTTGATGGTGCCTGCGCCCGAATTTGCTGGCGCTGGGCGTTACCTGGCTGGAGTGCATTAACGGCGGGGATCATCCTCGGTTCCTGGTGGGCCTACTGCGAACTCGGCTGGGGCGGCTGGTGGTTCTGGGATCCGGTGGAAAACGCCTCTTTATTACCCTGGCTTTCTGCCACTGCGCTGCTGCACAGTTTGTCCCTGACACGCCAGCGGGGGATTTTTTGCCACTGGTCGCTGTTGCTGGCGATAGTTACTCTGATGCTGTCGCTGCTGGGCACCTTAATTGTCCGTTCTGGCATTCTGGTTTCGGTTCATGCGTTCGCGCTGGATAACGTCCGCGCCGTGCCGTTGTTCAGCCTGTTTGCACTGATTAGCCTTGCGTCTCTGGCTCTGTATGGCTGGCGAGCGCGGGACGGTGGCCCGGCGGTGCATTTTTCGGGGTTATCGCGGGAAATGTTAATCCTCGCTACGCTGTTGCTGTTTTGCGCAGTGCTACTGATCGTGCTGGTGGGAACGCTTTATCCGATGATTTACGGCCTGCTGGGCTGGGGACGCCTCTCCGTTGGCGCGCCGTATTTTAACCGCGCGACGTTACCGTTTGGTCTGTTGATGCTGGTGGTGATTGTGCTGGCGACGTTTGTCTCTGGCAAACGCGTGCAGCTTCCGGCGCTGGTAGCTCATGCGGGCGTGCTGTTATTTGCCGCTGGGGTCGTGGTCTCCAGCGTCAGCCGTCAGGAGATCAGCCTGAATTTACAGCCGGGTCAGCAGGTGACGCTGGCAGGATACACCTTCCGTTTTGAGTGCCTCGATCTACAAGCCAAAGGCAATTACACCAGCGAAAAAGCGATAGTGGCACTGTTTGACCATCAGCAACGCATTGGTGAACTGACGCCGGAGCGGCGTTTTTATGAAGCACGCCGTCAACAAATGATGGAACCGTCAATTCGCTGGAACGGCATCCATGACTGGTATGCGGTCATGGGGGAGAAAACTGGGCCGGATCGTTACGCTTTTCGTTTGTATGTACAAAGCGGTGTGCGCTGGATCTGGGGGGGAGGATTGTTGATGATTGCGGGCGCATTGTTAAGCGGATGGCGGGGGAAGAAGCGCGATGAATAA", 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"gene_synonym", - "ASAP:ABE-0013352" - ], - [ - "gene_synonym", - "nrfF" - ], - [ - "gene_synonym", - "yjcM" - ], - [ - "gene_synonym", - "ECK4068" - ], - [ - "gene_synonym", - "EcoGene:EG11949" - ], - [ - "gene_synonym", - "GeneID:948578" - ], - [ - "gene_synonym", - "GI:16131901" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32711" - ], - [ - "gene_synonym", - "NP_418499.1" - ], - [ - "gene_synonym", - "JW4036" - ], - [ - "gene_synonym", - "b4075" - ] - ], - "dna_sequence": "ATGAATAAAGGGCTTCTCACGCTACTGCTGTTATTTACCTGTTTTGCGCACGCTCAGGTCGTAGACACCTGGCAATTCGCCAATCCGCAACAACAGCAACAGGCGTTAAATATTGCCAGCCAGTTACGTTGTCCGCAGTGCCAGAATCAAAACTTACTGGAATCCAACGCGCCGGTGGCTGTCAGTATGCGCCATCAGGTTTACAGCATGGTGGCGGAGGGGAAGAACGAAGTCGAAATCATTGGCTGGATGACCGAACGCTACGGAGATTTTGTTCGCTATAACCCACCGTTAACGGGTCAGACGCTGGTGTTATGGGCGCTGCCAGTGGTGTTGTTACTGCTGATGGCACTGATCCTCTGGCGAGTGAGGGCGAAGCGATGA", - "dna_sequence_length": 384, - "functions": [ - "heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF" - ], - "id": "CDS_3992", - "location": [ - [ - "NC_000913", - 4293163, - "+", - 384 - ] - ], - "md5": "d58274be1cfdbd6a33fd8d345407252c", - "parent_gene": "", - "protein_md5": "16053c58aa51599865e840b04f373a29", - "protein_translation": "MNKGLLTLLLLFTCFAHAQVVDTWQFANPQQQQQALNIASQLRCPQCQNQNLLESNAPVAVSMRHQVYSMVAEGKNEVEIIGWMTERYGDFVRYNPPLTGQTLVLWALPVVLLLLMALILWRVRAKR", - "protein_translation_length": 127, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11950" - ], - [ - "gene_synonym", - "ASAP:ABE-0013354" - ], - [ - "gene_synonym", - "GeneID:948592" - ], - [ - "gene_synonym", - "nrfG" - ], - [ - "gene_synonym", - "yjcN" - ], - [ - "gene_synonym", - "ECK4069" - ], - [ - "gene_synonym", - "GI:16131902" - ], - [ - "gene_synonym", - "NP_418500.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32712" - ], - [ - "gene_synonym", - "aidC" - ], - [ - "gene_synonym", - "b4076" - ], - [ - "gene_synonym", - "JW4037" - ] - ], - "dna_sequence": "ATGAAACAGCCCAAAATACCGGTGAAAATGCTGACAACACTCACGATATTGATGGTATTTCTCTGTGTCGGCAGTTATCTGTTAAGCCCAAAATGGCAGGCGGTACGTGCGGAGTATCAGCGTCAGCGCGATCCGCTACATCAGTTTGCCAGCCAGCAAACCCCGGAAGCGCAGCTTCAGGCATTGCAGGATAAAATCCGCGCTAATCCACAAAACAGCGAACAGTGGGCGTTACTGGGCGAGTACTATCTGTGGCAAAACGATTACAGCAATTCGTTGCTGGCGTACCGTCAGGCGTTGCAACTACGTGGTGAGAACGCTGAACTGTATGCGGCGCTGGCGACGGTGCTTTATTACCAGGCCAGCCAGCATATGACCGCCCAGACTCGCGCAATGATCGACAAAGCCCTCGCGCTGGACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACCGCGAGTTAACCGAACACAGCTGGTTGAGTCGATTAATATGGCGAAATTGTTGCAGCGGAGATTGGATTAA", - "dna_sequence_length": 597, - "functions": [ - "heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG" - ], - "id": "CDS_3993", - "location": [ - [ - "NC_000913", - 4293543, - "+", - 597 - ] - ], - "md5": "a5daead409a79a48b4bc2c894ae4d026", - "parent_gene": "", - "protein_md5": "4921688520da0bfe7ce37b89ea747542", - "protein_translation": "MKQPKIPVKMLTTLTILMVFLCVGSYLLSPKWQAVRAEYQRQRDPLHQFASQQTPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRVNRTQLVESINMAKLLQRRLD", - "protein_translation_length": 198, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418501.1" - ], - [ - "gene_synonym", - "ECK4070" - ], - [ - "gene_synonym", - "ASAP:ABE-0013357" - ], - [ - "gene_synonym", - "gltP" - ], - [ - "gene_synonym", - "GeneID:948591" - ], - [ - "gene_synonym", - "GI:16131903" - ], - [ - "gene_synonym", - "JW4038" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21345" - ], - [ - "gene_synonym", - "EcoGene:EG10405" - ], - [ - "gene_synonym", - "b4077" - ] - ], - "dna_sequence": "ATGAAAAATATAAAATTCAGCCTGGCCTGGCAGATTCTGTTTGCTATGGTGCTGGGCATTCTCCTGGGAAGCTACCTGCACTACCATAGCGACAGCCGCGACTGGCTGGTCGTCAATTTGCTCTCTCCGGCGGGTGATATCTTCATCCATCTGATTAAAATGATTGTTGTGCCGATTGTGATCTCCACGCTGGTGGTGGGTATCGCGGGTGTTGGTGATGCCAAACAGCTCGGGCGTATTGGCGCGAAAACCATTATCTACTTCGAGGTGATCACCACCGTCGCCATCATTTTGGGGATCACTCTGGCGAACGTCTTCCAGCCCGGTGCCGGGGTGGATATGTCGCAGTTGGCGACCGTCGATATCTCGAAATATCAGAGCACTACGGAAGCGGTACAAAGCAGTTCCCACGGCATTATGGGCACGATTTTGTCGCTGGTGCCGACGAACATTGTGGCGTCGATGGCGAAAGGCGAAATGCTGCCGATCATCTTTTTCTCGGTGCTGTTTGGTCTGGGGCTTTCTTCCCTGCCCGCGACGCATCGTGAACCGCTGGTGACCGTGTTCCGCTCCATCTCTGAAACCATGTTTAAAGTGACTCACATGGTGATGCGTTATGCACCGGTGGGTGTGTTTGCGCTGATTGCGGTGACGGTGGCTAACTTTGGTTTCTCGTCTCTGTGGCCACTGGCGAAACTGGTGCTGCTGGTGCATTTCGCCATTCTGTTCTTCGCGCTGGTAGTGCTGGGAATTGTGGCGCGCCTGTGCGGGTTAAGCGTCTGGATCCTGATTCGTATTCTGAAAGATGAGCTGATTCTGGCGTACTCCACTGCCAGCTCTGAAAGCGTGCTGCCGCGAATTATTGAGAAGATGGAAGCCTACGGAGCACCGGTGTCGATCACCAGTTTCGTGGTGCCGACCGGTTACTCTTTTAACCTTGATGGTTCGACGCTGTATCAAAGTATTGCCGCTATCTTCATCGCGCAGTTGTATGGCATTGACCTGTCCATCTGGCAGGAAATCATTCTGGTGCTGACGCTGATGGTGACCTCGAAAGGGATTGCTGGCGTGCCTGGCGTGTCGTTTGTGGTGTTGCTGGCAACGCTGGGTAGCGTAGGTATTCCGCTGGAAGGTCTGGCGTTTATTGCTGGTGTTGACCGTATCCTCGACATGGCGCGTACTGCGCTGAACGTGGTGGGTAATGCGCTGGCGGTGCTGGTGATTGCCAAGTGGGAACACAAATTTGACCGTAAGAAAGCGCTGGCTTATGAGCGTGAAGTGCTGGGCAAATTTGATAAAACTGCGGATCAATAA", 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"gene_synonym", - "ASAP:ABE-0013360" - ], - [ - "gene_synonym", - "GI:16131904" - ], - [ - "gene_synonym", - "yjcO" - ], - [ - "gene_synonym", - "GeneID:948586" - ], - [ - "gene_synonym", - "b4078" - ], - [ - "gene_synonym", - "JW4039" - ], - [ - "gene_synonym", - "NP_418502.1" - ] - ], - "dna_sequence": "ATGAAAAAAATTATCGCATTGATGTTGTTTTTGACATTCTTTGCCCACGCCAACGACTCCGAGCCTGGCAGCCAGTATTTAAAGGCAGCAGAGGCCGGGGACCGACGCGCACAATATTTTCTTGCCGACAGCTGGTTTAGCTCCGGCGATTTGAGCAAAGCCGAATATTGGGCACAGAAAGCCGCCGACAGCGGTGATGCTGATGCCTGCGCGCTGCTGGCGCAGATCAAAATCACCAATCCGGTCAGTCTGGACTATCCACAAGCAAAAGTTCTTGCAGAGAAAGCGGCGCAAGCGGGCAGTAAAGAAGGTGAAGTAACGCTGGCGCATATTCTGGTAAATACTCAAGCGGGTAAACCGGATTATCCAAAGGCAATTTCGCTGTTAGAAAACGCCTCGGAAGATCTGGAGAACGACTCTGCCGTCGATGCCCAAATGCTGCTTGGTTTGATTTACGCCAACGGCGTGGGCATTAAGGCCGACGATGACAAGGCAACCTGGTATTTCAAACGCAGCTCTGCAATTTCCCGAACCGGTTATTCCGAGTACTGGGCGGGAATGATGTTCTTAAACGGTGAAGAAGGTTTTATCGAGAAGAACAAGCAAAAGGCGCTGCACTGGTTGAACCTGAGCTGTATGGAAGGGTTTGATACCGGGTGTGAAGAGTTTGAAAAATTAACCAACGGTTAA", - "dna_sequence_length": 690, - "functions": [ - "Sel1 family TPR-like repeat protein" - ], - "id": "CDS_3995", - "location": [ - [ - "NC_000913", - 4297125, - "-", - 690 - ] - ], - "md5": "9a1c58b4c773a44437d2d4c138f90949", - "parent_gene": "", - "protein_md5": "c1956ba4f44fc32d2743103cc50fac91", - "protein_translation": "MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADSWFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGYSEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEGFDTGCEEFEKLTNG", - "protein_translation_length": 229, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4072" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07658" - ], - [ - "gene_synonym", - "ASAP:ABE-0013363" - ], - [ - "gene_synonym", - "GI:16131905" - ], - [ - "gene_synonym", - "GeneID:948584" - ], - [ - "gene_synonym", - "NP_418503.1" - ], - [ - "gene_synonym", - "b4079" - ], - [ - "gene_synonym", - "EcoGene:EG10285" - ], - [ - "gene_synonym", - "fdhF" - ], - [ - "gene_synonym", - "JW4040" - ] - ], - "dna_sequence": "ATGAAAAAAGTCGTCACGGTTTGCCCCTATTGCGCATCAGGTTGCAAAATCAACCTGGTCGTCGATAACGGCAAAATCGTCCGGGCGGAGGCAGCGCAGGGGAAAACCAACCAGGGTACCCTGTGTCTGAAGGGTTATTATGGCTGGGACTTCATTAACGATACCCAGATCCTGACCCCGCGCCTGAAAACCCCCATGATCCGTCGCCAGCGTGGCGGCAAACTCGAACCTGTTTCCTGGGATGAGGCACTGAATTACGTTGCCGAGCGCCTGAGCGCCATCAAAGAGAAGTACGGTCCGGATGCCATCCAGACGACCGGCTCCTCGCGTGGTACGGGTAACGAAACCAACTATGTAATGCAAAAATTTGCGCGCGCCGTTATTGGTACCAATAACGTTGACTGCTGCGCTCGTGTCTGACACGGCCCATCGGTTGCAGGTCTGCACCAATCGGTCGGTAATGGCGCAATGAGCAATGCTATTAACGAAATTGATAATACCGATTTAGTGTTCGTTTTCGGGTACAACCCGGCGGATTCCCACCCAATCGTGGCGAATCACGTAATTAACGCTAAACGTAACGGGGCGAAAATTATCGTCTGCGATCCGCGCAAAATTGAAACCGCGCGCATTGCTGACATGCACATTGCACTGAAAAACGGCTCGAACATCGCGCTGTTGAATGCGATGGGCCATGTCATTATTGAAGAAAATCTGTACGACAAAGCGTTCGTCGCTTCACGTACAGAAGGCTTTGAAGAGTATCGTAAAATCGTTGAAGGCTACACGCCGGAGTCGGTTGAAGATATCACCGGCGTCAGCGCCAGTGAGATTCGTCAGGCGGCACGGATGTATGCCCAGGCGAAAAGCGCCGCCATCCTGTGGGGCATGGGTGTAACCCAGTTCTACCAGGGCGTGGAAACCGTGCGTTCTCTGACCAGCCTCGCGATGCTGACCGGTAACCTCGGTAAGCCGCATGCGGGTGTTAACCCGGTTCGTGGTCAGAACAACGTTCAGGGTGCCTGCGATATGGGCGCGCTGCCGGATACGTATCCGGGATACCAGTACGTGAAAGATCCGGCTAACCGCGAGAAATTCGCCAAAGCCTGGGGCGTGGAAAGCCTGCCAGCGCATACCGGCTATCGCATCAGCGAGCTGCCGCACCGCGCAGCGCATGGCGAAGTGCGTGCCGCGTACATTATGGGCGAAGATCCGCTACAAACTGACGCGGAGCTGTCGGCAGTACGTAAAGCCTTTGAAGATCTGGAACTGGTTATCGTTCAGGACATCTTTATGACCAAAACCGCGTCGGCGGCGGATGTTATTTTACCGTCAACGTCGTGGGGCGAGCATGAAGGCGTGTTTACTGCGGCTGACCGTGGCTTCCAGCGTTTCTTCAAGGCGGTTGAACCGAAATGGGATCTGAAAACGGACTGGCAAATCATCAGTGAAATCGCCACCCGTATGGGTTATCCGATGCACTACAACAACACCCAGGAGATCTGGGATGAGTTGCGTCATCTGTGCCCGGATTTCTACGGTGCGACTTACGAGAAAATGGGCGAACTGGGCTTCATTCAGTGGCCTTGCCGCGATACTTCAGATGCCGATCAGGGGACTTCTTATCTGTTTAAAGAGAAGTTTGATACCCCGAACGGTCTGGCGCAGTTCTTCACCTGCGACTGGGTAGCGCCAATCGACAAACTCACCGACGAGTACCCGATGGTACTGTCAACGGTGCGTGAAGTTGGTCACTACTCTTGCCGTTCGATGACCGGTAACTGTGCGGCACTGGCGGCGCTGGCTGATGAACCTGGCTACGCACAAATCAATACCGAAGACGCCAAACGTCTGGGTATTGAAGATGAGGCATTGGTTTGGGTGCACTCGCGTAAAGGCAAAATTATCACCCGTGCGCAGGTCAGCGATCGTCCGAACAAAGGGGCGATTTACATGACCTACCAGTGGTGGATTGGTGCCTGTAACGAGCTGGTTACCGAAAACTTAAGCCCGATTACGAAAACGCCGGAGTACAAATACTGCGCCGTTCGCGTCGAGCCGATCGCCGATCAGCGCGCCGCCGAGCAGTACGTGATTGACGAGTACAACAAGTTGAAAACTCGCCTGCGCGAAGCGGCACTGGCGTAA", - "dna_sequence_length": 2148, - "functions": [ - "formate dehydrogenase-H, selenopolypeptide subunit" - ], - "id": "CDS_3996", - "location": [ - [ - "NC_000913", - 4299366, - "-", - 2148 - ] - ], - "md5": "c1d03d22a77ec9c8c90e3249668f24c5", - "parent_gene": "", - "protein_md5": "dae7698bc1ca57518d5743f81222b6e7", - "protein_translation": "MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLKGYYGWDFINDTQILTPRLKTPMIRRQRGGKLEPVSWDEALNYVAERLSAIKEKYGPDAIQTTGSSRGTGNETNYVMQKFARAVIGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNAINEIDNTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPRKIETARIADMHIALKNGSNIALLNAMGHVIIEENLYDKAFVASRTEGFEEYRKIVEGYTPESVEDITGVSASEIRQAARMYAQAKSAAILWGMGVTQFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRGQNNVQGACDMGALPDTYPGYQYVKDPANREKFAKAWGVESLPAHTGYRISELPHRAAHGEVRAAYIMGEDPLQTDAELSAVRKAFEDLELVIVQDIFMTKTASAADVILPSTSWGEHEGVFTAADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYPMHYNNTQEIWDELRHLCPDFYGATYEKMGELGFIQWPCRDTSDADQGTSYLFKEKFDTPNGLAQFFTCDWVAPIDKLTDEYPMVLSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTEDAKRLGIEDEALVWVHSRKGKIITRAQVSDRPNKGAIYMTYQWWIGACNELVTENLSPITKTPEYKYCAVRVEPIADQRAAEQYVIDEYNKLKTRLREAALA", - "protein_translation_length": 715, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "mdtP" - ], - [ - "gene_synonym", - "ECK4073" - ], - [ - "gene_synonym", - "GI:16131906" - ], - [ - "gene_synonym", - "NP_418504.1" - ], - [ - "gene_synonym", - "GeneID:948583" - ], - [ - "gene_synonym", - "b4080" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32714" - ], - [ - "gene_synonym", - "ASAP:ABE-0013366" - ], - [ - "gene_synonym", - "EcoGene:EG11952" - ], - [ - "gene_synonym", - "yjcP" - ], - [ - "gene_synonym", - "sdsP" - ], - [ - "gene_synonym", - "JW4041" - ] - ], - "dna_sequence": "ATGATCAATCGTCAACTTTCACGTCTGCTGTTGTGCAGCATTCTCGGCAGCACGACGCTGATTTCCGGCTGTGCCCTGGTACGTAAGGATTCTGCACCTCATCAACAGCTCAAACCGGAACAAATCAAACTGGCCGACGATATTCATCTTGCCAGCTCCGGCTGGCCGCAGGCGCAGTGGTGGAAACAACTCAATGACCCGCAGCTGGATGCGCTGATCCAACGGACGCTAAGTGGTTCACACACCCTCGCCGAAGCGAAACTGCGGGAAGAAAAAGCGCAGTCCCAGGCCGATTTGTTAGATGCCGGTTCACAATTACAGGTCGCAGCGTTAGGGATGCTCAACCGCCAACGTGTCTCGGCGAACGGCTTTTTAAGCCCTTATTCAATGGATGCGCCAGCACTGGGTATGGACGGGCCGTACTATACGGAAGCCACAGTAGGTTTGTTTGCCGGACTGGATCTTGATTTGTGGGGTGTGCATCGCTCAGCGGTTGCCGCCGCCATTGGCGCGCATAATGCCGCGCTGGCAGAAACCGCAGCAGTAGAGCTATCGCTGGCCACGGGCGTAGCGCAGCTTTATTACAGTATGCAGGCCAGCTATCAGATGCTCGATCTGTTAGAACAAACTCACGATGTGATTGATTACGCGGTGAAAGCGCACCAGAGTAAAGTGGCGCACGGTCTGGAAGCGCAAGTGCCTTTCCACGGCGCGCGGGCACAGATTCTGGCGGTCGATAAACAAATTGTTGCCGTCAAAGGGCAAATCACCGAAACGCGAGAATCTCTGCGTGCATTGATTGGCGCGGGAGCCAGCGATATGCCGGAGATCAGACCGGTGGCATTACCGCAAGTCCAGACCGGCATTCCGGCGACACTCTCTTATGAGTTGCTCGCCAGACGCCCGGATCTGCAAGCCATGCGCTGGTATGTTCAGGCGTCATTAGATCAGGTGGATTCCGCGCGGGCGTTGTTCTATCCGAGCTTTGATATCAAAGCGTTTTTCGGTCTGGACTCCATCCATCTGCATACCTTATTCAAAAAAACCAGTCGCCAGTTCAACTTCATCCCGGGTCTGAAATTGCCGCTGTTTGACGGTGGACGGTTGAATGCCAATCTCGAAGGCACGCGCGCCGCCAGCAACATGATGATTGAACGTTACAACCAGTCAGTACTGAACGCGGTGCGTGACGTTGCCGTCAACGGCACGCGTCTGCAAACGCTCAACGACGAGCGAGAAATGCAGGCTGAACGCGTGGAAGCCACGCGCTTTACCCAGCGCGCTGCCGAGGCCGCCTATCAGCGCGGCTTAACCAGCCGCTTACAGGCCACCGAAGCCCGGTTGCCAGTGCTTGCCGAAGAGATGTCATTACTGATGCTGGACAGCCGCCGGGTGATCCAAAGCATTCAGTTGATGAAATCGCTGGGCGGCGGGTATCAGGCAGGTCCCGTCGTCGAGAAAAAATAA", - "dna_sequence_length": 1467, - "functions": [ - "outer membrane factor of efflux pump" - ], - "id": "CDS_3997", - "location": [ - [ - "NC_000913", - 4301030, - "-", - 1467 - ] - ], - "md5": "48ae5c48b39f862635c7bd5f6b9d9d98", - "parent_gene": "", - "protein_md5": "789cdc73f9b0234ef0741851c7021124", - "protein_translation": "MINRQLSRLLLCSILGSTTLISGCALVRKDSAPHQQLKPEQIKLADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLSGSHTLAEAKLREEKAQSQADLLDAGSQLQVAALGMLNRQRVSANGFLSPYSMDAPALGMDGPYYTEATVGLFAGLDLDLWGVHRSAVAAAIGAHNAALAETAAVELSLATGVAQLYYSMQASYQMLDLLEQTHDVIDYAVKAHQSKVAHGLEAQVPFHGARAQILAVDKQIVAVKGQITETRESLRALIGAGASDMPEIRPVALPQVQTGIPATLSYELLARRPDLQAMRWYVQASLDQVDSARALFYPSFDIKAFFGLDSIHLHTLFKKTSRQFNFIPGLKLPLFDGGRLNANLEGTRAASNMMIERYNQSVLNAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAEAAYQRGLTSRLQATEARLPVLAEEMSLLMLDSRRVIQSIQLMKSLGGGYQAGPVVEKK", - "protein_translation_length": 488, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4074" - ], - [ - "gene_synonym", - "GI:90111683" - ], - [ - "gene_synonym", - "EcoGene:EG11953" - ], - [ - "gene_synonym", - "ASAP:ABE-0013368" - ], - [ - "gene_synonym", - "b4081" - ], - [ - "gene_synonym", - "GeneID:948582" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32715" - ], - [ - "gene_synonym", - "NP_418505.2" - ], - [ - "gene_synonym", - "yjcQ" - ], - [ - "gene_synonym", - "sdsQ" - ], - [ - "gene_synonym", - "mdtO" - ], - [ - "gene_synonym", - "JW4042" - ] - ], - "dna_sequence": "ATGAGCGCGCTCAACTCCCTGCCATTACCGGTGGTCAGGCTGCTGGCGTTCTTTCATGAAGAGTTAAGCGAGCGGCGACCAGGTCGCGTGCCGCAGACCGTGCAACTCTGGGTAGGCTGCCTGCTGGTGATTCTGATCTCGATGACCTTTGAGATCCCTTTTGTGGCGTTATCGCTGGCAGTGCTGTTTTACGGTATTCAGTCGAACGCGTTTTACACCAAATTTGTCGCGATCTTGTTTGTGGTTGCCACGGTGCTGGAGATCGGCAGCCTGTTTTTGATCTACAAATGGTCATACGGCGAACCGTTGATCCGATTGATCATCGCCGGACCGATCCTGATGGGCTGCATGTTTTTGATGCGCACCCATCGCTTGGGGCTGGTCTTTTTCGCCGTCGCCATTGTCGCTATTTACGGGCAAACCTTCCCCGCCATGCTCGACTATCCGGAAGTGGTCGTGCGCTTAACGCTGTGGTGTATCGTTGTTGGCCTCTATCCAACCTTGCTGATGACGTTAATCGGCGTGCTGTGGTTTCCCAGTCGTGCCATTTCGCAAATGCATCAGGCGCTTAATGATCGGCTTGATGATGCCATTAGTCACCTGACAGACAGCCTCGCACCGCTACCCGAAACGCGGATTGAAAGAGAGGCGCTGGCGCTACAAAAACTCAATGTCTTTTGCCTCGCGGACGATGCCAACTGGCGAACTCAAAACGCATGGTGGCAAAGCTGCGTGGCAACGGTAACCTACATTTACTCGACGCTGAATCGCTACGATCCCACCTCTTTTGCTGATTCTCAGGCAATTATTGAATTCCGACAAAAATTAGCTTCAGAAATCAACAAGCTGCAGCATGCCGTTGCTGAAGGTCAGTGCTGGCAAAGCGACTGGCGGATCAGTGAAAGTGAAGCGATGGCGGCACGGGAATGTAACCTGGAGAATATCTGCCAGACGTTGTTACAACTGGGTCAGATGGACCCGAATACGCCGCCAACGCCCGCAGCCAAACCGCCATCAATGGCCGCCGATGCTTTTACCAATCCAGACTATATGCGCTACGCGGTAAAAACGCTGCTCGCCTGTTTGATCTGTTACACCTTTTACAGCGGCGTGGACTGGGAAGGCATTCACACCTGTATGCTGACATGCGTGATCGTCGCTAACCCAAATGTCGGTTCGTCGTACCAGAAGATGGTGCTGCGTTTTGGCGGGGCCTTTTGCGGCGCGATTCTGGCGCTGTTATTCACGCTACTGGTCATGCCCTGGCTGGACAATATTGTCGAATTGCTGTTTGTGCTGGCACCGATTTTCCTGTTGGGCGCATGGATTGCCACCAGCTCTGAACGCTCTTCTTATATCGGCACACAGATGGTGGTCACCTTCGCGCTCGCCACGCTCGAAAACGTTTTTGGCCCAGTGTACGACCTGGTGGAAATTCGCGATCGCGCCCTGGGTATCATCATTGGTACCGTGGTGTCCGCGGTGATTTACACCTTTGTCTGGCCTGAAAGTGAAGCGCGCACACTGCCGCAAAAACTGGCTGGCACGCTGGGTATGTTAAGTAAAGTAATGCGGATCCCACGCCAGCAGGAAGTCACGGCTCTGCGCACTTATCTGCAAATTCGTATCGGTCTGCATGCGGCGTTTAATGCCTGTGAAGAGATGTGCCAACGCGTGGCGCTGGAGCGTCAACTGGACAGCGAAGAACGCGCATTACTGATTGAACGTTCGCAAACGGTTATTCGTCAGGGCCGCGATCTTCTTCACGCCTGGGATGCCACCTGGAACTCGGCGCAGGCGCTGGATAACGCACTACAGCCGGACAGAGCAGGTCAGTTTGCCGACGCCCTGGAGAAATACGCTGCCGGTCTGGCAACCGCACTCAGCCGTTCTCCTCAAATAACGCTTGAAGAGACACCCGCCTCTCAGGCCATCCTGCCCACCTTATTAAAACAGGAGCAACACGTCTGCCAGCTTTTCGCCCGCTTGCCAGACTGGACAGCCCCGGCATTAACGCCCGCCACGGAACAGGCACAAGGAGCCACGCAATGA", - "dna_sequence_length": 2052, - "functions": [ - "membrane translocase (MDR) of MdtNOP efflux pump, PET family" - ], - "id": "CDS_3998", - "location": [ - [ - "NC_000913", - 4303078, - "-", - 2052 - ] - ], - "md5": "5b5a8a466b23ce07d7df83501528f737", - "parent_gene": "", - "protein_md5": "c9a89206311cdcb30ae620083ea936db", - "protein_translation": "MSALNSLPLPVVRLLAFFHEELSERRPGRVPQTVQLWVGCLLVILISMTFEIPFVALSLAVLFYGIQSNAFYTKFVAILFVVATVLEIGSLFLIYKWSYGEPLIRLIIAGPILMGCMFLMRTHRLGLVFFAVAIVAIYGQTFPAMLDYPEVVVRLTLWCIVVGLYPTLLMTLIGVLWFPSRAISQMHQALNDRLDDAISHLTDSLAPLPETRIEREALALQKLNVFCLADDANWRTQNAWWQSCVATVTYIYSTLNRYDPTSFADSQAIIEFRQKLASEINKLQHAVAEGQCWQSDWRISESEAMAARECNLENICQTLLQLGQMDPNTPPTPAAKPPSMAADAFTNPDYMRYAVKTLLACLICYTFYSGVDWEGIHTCMLTCVIVANPNVGSSYQKMVLRFGGAFCGAILALLFTLLVMPWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATLENVFGPVYDLVEIRDRALGIIIGTVVSAVIYTFVWPESEARTLPQKLAGTLGMLSKVMRIPRQQEVTALRTYLQIRIGLHAAFNACEEMCQRVALERQLDSEERALLIERSQTVIRQGRDLLHAWDATWNSAQALDNALQPDRAGQFADALEKYAAGLATALSRSPQITLEETPASQAILPTLLKQEQHVCQLFARLPDWTAPALTPATEQAQGATQ", - "protein_translation_length": 683, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4075" - ], - [ - "gene_synonym", - "GeneID:948598" - ], - [ - "gene_synonym", - "ASAP:ABE-0013373" - ], - [ - "gene_synonym", - "GI:16131908" - ], - [ - "gene_synonym", - "b4082" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32716" - ], - [ - "gene_synonym", - "yjcR" - ], - [ - "gene_synonym", - "sdsR" - ], - [ - "gene_synonym", - "NP_418506.1" - ], - [ - "gene_synonym", - "JW4043" - ], - [ - "gene_synonym", - "mdtN" - ], - [ - "gene_synonym", - "EcoGene:EG11954" - ] - ], - "dna_sequence": "ATGGAAAGTACGCCGAAAAAAGCTCCTCGCAGTAAATTCCCTGCTCTGTTAGTGGTTGCGTTGGCGCTGGTTGCCCTTGTTTTCGTTATCTGGCGCGTAGACAGTGCGCCATCAACTAATGACGCTTACGCGTCAGCAGATACCATTGATGTGGTACCGGAAGTCAGCGGCCGCATTGTAGAACTGGCGGTCACCGACAACCAGGCAGTCAAACAGGGCGATTTGCTGTTCCGCATCGACCCGCGCCCGTACGAAGCCAATCTGGCGAAAGCTGAAGCCTCCCTCGCGGCGCTGGATAAGCAAATTATGCTCACCCAGCGTAGCGTTGACGCGCAACAGTTTGGTGCCGACTCGGTTAATGCCACGGTAGAAAAAGCCCGTGCCGCCGCGAAACAGGCCACAGATACATTACGCCGCACCGAGCCATTACTGAAAGAAGGTTTTGTCTCAGCGGAAGATGTTGACCGTGCAAGAACGGCGCAGCGCGCCGCAGAAGCGGATCTTAATGCCGTATTGTTACAGGCGCAGTCAGCCGCCAGCGCCGTCAGCGGCGTGGATGCATTAGTTGCCCAGCGTGCGGCGGTCGAAGCGGATATTGCCCTGACCAAACTGCATCTGGAAATGGCGACCGTTCGCGCGCCGTTTGATGGCCGGGTCATTTCCCTCAAAACCTCCGTCGGGCAATTTGCTTCTGCCATGCGCCCTATTTTTACCCTAATCGACACTCGTCACTGGTATGTGATCGCCAACTTCCGCGAAACCGATCTGAAAAATATTCGCTCAGGTACACCCGCAACGATTCGCCTGATGAGTGACAGCGGCAAAACCTTCGAGGGTAAAGTGGATTCGATTGGCTACGGCGTGCTACCGGATGACGGCGGCCTGGTGCTGGGCGGCCTGCCGAAAGTGTCTCGTTCTATTAACTGGGTCCGCGTTGCCCAGCGTTTTCCGGTCAAAATCATGGTCGATAAACCTGACCCGGAAATGTTCCGCATCGGCGCTTCGGCAGTCGCTAATCTTGAGCCGCAATAA", - "dna_sequence_length": 1032, - "functions": [ - "membrane fusion protein of efflux pump" - ], - "id": "CDS_3999", - "location": [ - [ - "NC_000913", - 4304109, - "-", - 1032 - ] - ], - "md5": "4ee6e95818b4ec22a4507f763573d7cd", - "parent_gene": "", - "protein_md5": "d2f4c2d153851a199c26a184e332e674", - "protein_translation": "MESTPKKAPRSKFPALLVVALALVALVFVIWRVDSAPSTNDAYASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTKLHLEMATVRAPFDGRVISLKTSVGQFASAMRPIFTLIDTRHWYVIANFRETDLKNIRSGTPATIRLMSDSGKTFEGKVDSIGYGVLPDDGGLVLGGLPKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGASAVANLEPQ", - "protein_translation_length": 343, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4622" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:A5A630" - ], - [ - "gene_synonym", - "EcoGene:EG14401" - ], - [ - "gene_synonym", - "GeneID:5061530" - ], - [ - "gene_synonym", - "GI:145698342" - ], - [ - "gene_synonym", - "ECK4430" - ], - [ - "gene_synonym", - "YP_001165334.1" - ], - [ - "gene_synonym", - "ytcA" - ] - ], - "dna_sequence": "ATGCCAACAGTTCTCTCTCGCATGGCGATGCAACTCAAAAAAACAGCCTGGATAATTCCCGTCTTCATGGTTTCGGGATGCTCATTATCTCCGGCAATCCCGGTGATCGGCGCTTATTATCCCAGCTGGTTTTTCTGCGCCATTGCCAGCCTTATTTTGACGCTCATCACGAGGCGAGTTATTCAGCGGGCAAATATCAATCTGGCATTTGTCGGAATTATTTATACCGCCCTTTTTGCTCTCTACGCCATGCTGTTCTGGCTGGCATTTTTCTAA", - "dna_sequence_length": 276, - "functions": [ - "putative inner membrane efflux pump-associated DUF1656 family protein" - ], - "id": "CDS_4000", - "location": [ - [ - "NC_000913", - 4304403, - "-", - 276 - ] - ], - "md5": "e4bfdc6dc7e90ec9fda04d7ab1e2700d", - "parent_gene": "", - "protein_md5": "9abdad21bf235621e318ea6ded2a0321", - "protein_translation": "MPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWFFCAIASLILTLITRRVIQRANINLAFVGIIYTALFALYAMLFWLAFF", - "protein_translation_length": 91, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013377" - ], - [ - "gene_synonym", - "ECK4076" - ], - [ - "gene_synonym", - "EcoGene:EG11955" - ], - [ - "gene_synonym", - "GI:90111684" - ], - [ - "gene_synonym", - "b4083" - ], - [ - "gene_synonym", - "GeneID:948597" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32717" - ], - [ - "gene_synonym", - "yjcS" - ], - [ - "gene_synonym", - "JW5721" - ], - [ - "gene_synonym", - "NP_418507.2" - ] - ], - "dna_sequence": "ATGAATAACTCTCGGTTATTCCGTTTGAGCAGGATTGTTATTGCGTTAACTGCCGCCAGCGGCATGATGGTAAATACCGCTAACGCGAAAGAGGAAGCGAAAGCCGCCACTCAATATACCCAACAGGTTAATCAGAATTACGCCAAATCATTACCGTTTAGCGATCGTCAGGATTTTGACGATGCCCAGCGTGGATTTATCGCCCCGCTGCTGGATGAAGGTATTCTGCGTGATGCGAACGGTAAAGTTTACTACCGCGCGGACGATTACAAATTTGATATTAATGCCGCAGCGCCGGAAACCGTAAACCCCAGCCTGTGGCGTCAGTCGCAAATCAACGGTATTTCTGGCCTGTTCAAAGTCACCGATAAAATGTATCAGGTGCGCGGCCAGGATATCTCTAACATTACGTTCGTTGAGGGCGAGAAAGGCATTATTGTTATCGACCCGCTGGTGACGCCGCCTGCCGCAAAAGCCGCACTTGACCTTTACTTCCAGCATCGTCCGCAAAAACCGATTGTTGCCGTTATCTACACTCACAGCCACACCGACCACTATGGTGGCGTGAAAGGCATTATCTCTGAAGCCGATGTTAAATCCGGCAAAGTTCAGGTGATTGCCCCTGCAGGCTTTATGGACGAAGCCATCAGCGAAAACGTGCTGGCGGGTAACATCATGAGCCGCCGTGCGCTCTACTCTTACGGTCTGTTACTGCCGCACAACGCGCAAGGCAATGTGGGTAATGGCCTTGGCGTGACGCTGGCAACGGGCGACCCGAGCATTATTGCACCGACGAAAACTATCGTCAGAACTGGCGAGAAGATGATTATCGACGGCCTGGAGTTTGACTTCCTGATGACCCCAGGTAGCGAAGCGCCAGCCGAAATGCACTTCTATATTCCGGCCCTGAAAGCCCTGTGTACCGCCGAGAACGCCACGCATACCCTGCACAACTTCTACACTCTGCGCGGCGCGAAAACCCGCGACACCAGCAAGTGGACCGAGTATCTGAACGAAACGCTGGATATGTGGGGTAACGACGCGGAAGTGCTGTTTATGCCGCACACCTGGCCGGTCTGGGGCAATAAGCATATCAATGATTATATTGGTAAATACCGCGATACCATCAAGTACATTCACGACCAGACCCTGCACCTGGCGAACCAGGGCTACACCATGAATGAAATCGGCGACATGATTAAGCTGCCGCCTGCACTTGCCAATAACTGGGCCAGCCGCGGCTATTACGGTTCTGTCAGCCACAACGCCCGCGCGGTGTATAACTTCTATCTTGGCTATTACGACGGTAACCCGGCTAACCTGCATCCGTATGGTCAGGTGGAGATGGGTAAACGTTACGTGCAGGCGCTGGGCGGTTCTGCCCGTGTCATCAACCTGGCGCAAGAAGCGAACAAGCAAGGTGATTACCGCTGGTCGGCAGAACTGCTGAAACAGGTGATTGCCGCCAACCCGGGTGACCAGGTCGCGAAGAATCTGCAAGCGAATAACTTTGAACAGCTGGGCTATCAGGCCGAGTCCGCCACATGGCGCGGTTTCTACCTGACCGGCGCGAAAGAGCTGCGCGAAGGGGTGCATAAGTTCAGCCACGGCACCACCGGTTCCCCGGACACCATTCGCGGGATGTCGGTCGAAATGCTGTTCGACTTTATGGCCGTTCGCCTCGATAGCGCGAAAGCTGCGGGTAAAAATATCAGCCTGAACTTCAATATGAGCAACGGCGATAACCTCAACCTGACGCTGAACGATAGCGTGCTTAACTACCGGAAAACGCTGCAACCGCAAGCCGACGCCTCTTTCTACATCAGCCGTGAAGATCTGCACGCCGTGCTGACCGGACAAGCCAAAATGGCGGATCTGGTAAAAGCGAAGAAAGCCAAAATTATTGGCAATGGCGCGAAACTGGAAGAAATTATCGCCTGTCTGGATAATTTCGATTTGTGGGTGAATATCGTAACCCCAAATTAA", 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"protein_translation_length": 661, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32718" - ], - [ - "gene_synonym", - "ECK4077" - ], - [ - "gene_synonym", - "ASAP:ABE-0013380" - ], - [ - "gene_synonym", - "GI:16131910" - ], - [ - "gene_synonym", - "EcoGene:EG11956" - ], - [ - "gene_synonym", - "GeneID:948596" - ], - [ - "gene_synonym", - "b4084" - ], - [ - "gene_synonym", - "yjcT" - ], - [ - "gene_synonym", - "alsK" - ], - [ - "gene_synonym", - "JW5724" - ], - [ - "gene_synonym", - "NP_418508.1" - ] - ], - "dna_sequence": "ATGCAAAAACAGCATAACGTCGTAGCGGGCGTGGATATGGGGGCAACGCATATCCGCTTTTGTCTGCGGACAGCAGAAGGTGAAACGCTACACTGCGAAAAAAAGCGGACCGCAGAAGTCATTGCTCCCGGCCTGGTGTCGGGTATCGGCGAAATGATTGACGAGCAACTCAGGCGCTTTAACGCTCGCTGTCATGGTCTGGTGATGGGATTTCCGGCGCTGGTCAGTAAAGATAAACGCACCATTATTTCTACGCCTAACCTGCCGTTAACAGCGGCGGATTTATATGATCTCGCCGATAAGCTCGAAAATACGCTGAATTGTCCGGTTGAGTTTTCCCGCGACGTTAACCTGCAACTCTCCTGGGACGTAGTAGAAAACCGCCTTACGCAACAACTGGTTCTGGCGGCCTATCTCGGTACGGGGATGGGGTTCGCAGTGTGGATGAACGGTGCGCCGTGGACGGGTGCACACGGTGTGGCAGGCGAACTGGGTCATATCCCCCTGGGAGATATGACCCAACACTGCGCGTGTGGCAATCCTGGGTGCCTGGAAACCAATTGCTCTGGAATGGCGCTAAGACGCTGGTACGAACAACAGCCCCGAAATTACCCATTGCGCGATCTTTTCGTCCATGCGGAAAACGCCCCTTTCGTCCAGAGTCTGCTTGAAAACGCGGCACGGGCCATTGCCACCAGCATTAATCTGTTCGATCCCGATGCGGTGATCCTGGGCGGTGGCGTGATGGATATGCCCGCCTTCCCACGCGAGACTCTCGTTGCCATGACCCAAAAGTACCTGCGCCGTCCACTGCCGCATCAGGTCGTGCGCTTTATTGCCGCCTCATCTTCTGACTTTAATGGCGCTCAGGGTGCAGCAATATTGGCGCATCAACGTTTTTTGCCACAGTTCTGTGCTAAAGCCCCATGA", - "dna_sequence_length": 930, - "functions": [ - "D-allose kinase" - ], - "id": "CDS_4002", - "location": [ - [ - "NC_000913", - 4307799, - "-", - 930 - ] - ], - "md5": "84f940de1b25e92642fa76de61695dde", - "parent_gene": "", - "protein_md5": "31c48e83617ae616d4965ba6ad2f4d39", - "protein_translation": "MQKQHNVVAGVDMGATHIRFCLRTAEGETLHCEKKRTAEVIAPGLVSGIGEMIDEQLRRFNARCHGLVMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMGFAVWMNGAPWTGAHGVAGELGHIPLGDMTQHCACGNPGCLETNCSGMALRRWYEQQPRNYPLRDLFVHAENAPFVQSLLENAARAIATSINLFDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQFCAKAP", - "protein_translation_length": 309, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32719" - ], - [ - "gene_synonym", - "ASAP:ABE-0013382" - ], - [ - "gene_synonym", - "EcoGene:EG11957" - ], - [ - "gene_synonym", - "NP_418509.1" - ], - [ - "gene_synonym", - "ECK4078" - ], - [ - "gene_synonym", - "b4085" - ], - [ - "gene_synonym", - "GeneID:948595" - ], - [ - "gene_synonym", - "yjcU" - ], - [ - "gene_synonym", - "GI:16131911" - ], - [ - "gene_synonym", - "JW4046" - ], - [ - "gene_synonym", - "alsE" - ] - ], - "dna_sequence": "ATGAAAATCTCCCCCTCGTTAATGTGTATGGATCTGCTGAAATTTAAAGAACAGATCGAATTTATCGACAGCCATGCCGATTACTTCCACATCGATATCATGGACGGTCACTTTGTCCCCAATCTGACACTCTCACCGTTCTTCGTAAGTCAGGTTAAAAAACTGGCAACTAAACCGCTCGACTGTCATCTGATGGTGACGCGGCCGCAGGATTACATTGCTCAACTGGCGCGTGCGGGAGCAGATTTCATCACTCTGCATCCGGAAACCATCAACGGCCAGGCGTTCCGCCTGATTGATGAAATCCGCCGTCATGACATGAAAGTGGGGCTGATCCTTAACCCGGAGACGCCAGTTGAGGCCATGAAATACTATATCCATAAGGCCGATAAAATTACGGTCATGACTGTCGATCCCGGCTTTGCCGGACAACCGTTCATTCCTGAAATGCTGGATAAACTTGCCGAACTGAAGGCATGGCGTGAACGAGAAGGTCTGGAGTACGAAATTGAGGTGGACGGTTCCTGCAACCAGGCAACTTACGAAAAACTGATGGCGGCAGGGGCGGATGTCTTTATCGTCGGCACTTCCGGCCTGTTTAATCATGCGGAAAATATCGACGAAGCATGGAGAATTATGACCGCGCAGATTCTGGCTGCAAAAAGCGAGGTACAGCCTCATGCAAAAACAGCATAA", - "dna_sequence_length": 696, - "functions": [ - "allulose-6-phosphate 3-epimerase" - ], - "id": "CDS_4003", - "location": [ - [ - "NC_000913", - 4308478, - "-", - 696 - ] - ], - "md5": "2f856213f74e5f35a8705371b7383aea", - "parent_gene": "", - "protein_md5": "5a4af81f8333785c92397ad10b347023", - "protein_translation": "MKISPSLMCMDLLKFKEQIEFIDSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTAQILAAKSEVQPHAKTA", - "protein_translation_length": 231, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013392" - ], - [ - "gene_synonym", - "EcoGene:EG11958" - ], - [ - "gene_synonym", - "GI:16131912" - ], - [ - "gene_synonym", - "ECK4079" - ], - [ - "gene_synonym", - "b4086" - ], - [ - "gene_synonym", - "GeneID:948594" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32720" - ], - [ - "gene_synonym", - "yjcV" - ], - [ - "gene_synonym", - "NP_418510.1" - ], - [ - "gene_synonym", - "JW4047" - ], - [ - "gene_synonym", - "alsC" - ] - ], - "dna_sequence": "ATGGGCTTTACCACAAGAGTAAAAAGCGAAGCGAGCGAGAAGAAACCGTTCAACTTTGCGCTGTTCTGGGATAAATACGGCACCTTTTTTATCCTGGCGATCATCGTCGCCATCTTTGGTTCGCTGTCACCAGAATATTTTCTGACCACCAATAATATTACCCAGATTTTTGTTCAAAGCTCCGTGACGGTATTGATCGGCATGGGCGAGTTTTTCGCTATCCTGGTCGCTGGTATCGACCTCTCGGTTGGCGCGATTCTGGCGCTTTCCGGTATGGTGACCGCCAAACTGATGTTGGCAGGTGTTGACCCGTTTCTCGCAGCGATGATTGGCGGTGTACTGGTTGGCGGCGCACTGGGGGCGATCAACGGCTGCCTGGTCAACTGGACGGGGCTACACCCGTTCATCATCACCCTTGGCACCAACGCGATTTTCCGTGGGATCACGCTGGTGATCTCCGATGCCAACTCGGTATACGGCTTCTCATTTGACTTCGTGAACTTCTTTGCCGCCAGCGTAATTGGGATACCTGTCCCCGTTATCTTCTCACTAATTGTCGCGCTCATCCTTTGGTTTCTGACAACGCGTATGCGGCTCGGGCGCAACATCTACGCACTGGGCGGCAACAAAAATTCGGCGTTCTATTCCGGGATTGACGTGAAATTCCACATCCTGGTGGTGTTTATCATCTCCGGTGTTTGTGCAGGTCTGGCAGGCGTCGTCTCAACTGCACGACTCGGTGCCGCAGAACCGCTTGCCGGTATGGGTTTTGAAACCTATGCCATTGCCAGCGCCATCATTGGCGGCACCAGTTTCTTCGGCGGCAAGGGGCGCATTTTCTCTGTGGTGATTGGCGGGTTGATCATCGGCACCATCAACAACGGTCTGAATATTTTGCAGGTACAAACCTATTACCAACTGGTGGTGATGGGCGGATTAATTATCGCGGCTGTCGCCCTTGACCGTCTTATCAGTAAGTAA", - "dna_sequence_length": 981, - "functions": [ - "D-allose ABC transporter permease" - ], - "id": "CDS_4004", - "location": [ - [ - "NC_000913", - 4309469, - "-", - 981 - ] - ], - "md5": "bb3a6bb1266ffa388abb9c5887f850a2", - "parent_gene": "", - "protein_md5": "2892364ec80d127a376a1c557ffffca6", - "protein_translation": "MGFTTRVKSEASEKKPFNFALFWDKYGTFFILAIIVAIFGSLSPEYFLTTNNITQIFVQSSVTVLIGMGEFFAILVAGIDLSVGAILALSGMVTAKLMLAGVDPFLAAMIGGVLVGGALGAINGCLVNWTGLHPFIITLGTNAIFRGITLVISDANSVYGFSFDFVNFFAASVIGIPVPVIFSLIVALILWFLTTRMRLGRNIYALGGNKNSAFYSGIDVKFHILVVFIISGVCAGLAGVVSTARLGAAEPLAGMGFETYAIASAIIGGTSFFGGKGRIFSVVIGGLIIGTINNGLNILQVQTYYQLVVMGGLIIAAVALDRLISK", - "protein_translation_length": 326, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013394" - ], - [ - "gene_synonym", - "GeneID:948593" - ], - [ - "gene_synonym", - "NP_418511.1" - ], - [ - "gene_synonym", - "EcoGene:EG11959" - ], - [ - "gene_synonym", - "b4087" - ], - [ - "gene_synonym", - "GI:16131913" - ], - [ - "gene_synonym", - "ECK4080" - ], - [ - "gene_synonym", - "yjcW" - ], - [ - "gene_synonym", - "JW4048" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P32721" - ], - [ - "gene_synonym", - "alsA" - ] - ], - "dna_sequence": "ATGGCCACGCCATATATATCGATGGCGGGGATCGGCAAGTCCTTTGGTCCGGTTCACGCATTAAAGTCGGTTAATTTAACGGTTTATCCTGGTGAAATACATGCATTACTAGGAGAAAATGGCGCGGGTAAATCCACGCTAATGAAAGTTTTATCCGGAATACATGAGCCGACCAAAGGCACCATTACCATTAATAACATTAGCTATAACAAGCTGGATCATAAATTAGCGGCACAACTCGGTATCGGGATTATTTATCAGGAACTCAGCGTTATTGATGAATTAACCGTACTGGAAAATTTATATATTGGTCGTCATCTGACGAAAAAAATCTGTGGCGTCAATATTATCGACTGGCGAGAAATGCGTGTCCGCGCCGCCATGATGTTATTACGCGTGGGCTTGAAAGTTGATCTAGATGAGAAAGTGGCGAATTTATCTATCAGCCACAAGCAGATGCTAGAAATTGCCAAAACGCTGATGCTCGATGCCAAAGTCATCATCATGGATGAACCCACCTCCTCACTCACCAATAAAGAGGTGGACTATCTGTTTCTGATCATGAATCAGTTGCGTAAAGAGGGTACGGCCATCGTCTATATCTCGCATAAGTTGGCGGAAATTCGCCGTATTTGCGACCGCTATACGGTGATGAAAGACGGCAGCAGCGTTTGCAGCGGCATAGTAAGCGATGTGTCAAATGACGATATCGTCCGTCTGATGGTAGGCCGCGAACTGCAAAACCGTTTTAACGCGATGAAGGAGAATGTCAGCAACCTTGCGCACGAAACGGTTTTTGAGGTGCGGAACGTCACCAGTCGTGACAGAAAAAAGGTCCGGGATATCTCATTTAGCGTCTGCCGGGGAGAAATATTAGGCTTTGCCGGACTGGTCGGTTCCGGACGTACTGAACTGATGAATTGTCTGTTTGGCGTGGATAAACGCGCTGGCGGAGAAATCCGTCTTAATGGCAAAGATATCTCTCCACGTTCACCCCTGGATGCCGTGAAAAAAGGGATGGCTTACATCACTGAAAGCCGCCGGGATAACGGTTTTTTCCCCAACTTTTCCATCGCTCAGAACATGGCGATCAGCCGCAGTCTGAAAGACGGCGGCTATAAAGGCGCGATGGGCTTGTTTCATGAAGTTGACGAGCAACGTACCGCTGAAAATCAACGCGAACTGCTGGCGCTGAAATGTCATTCGGTAAACCAGAATATCACCGAACTCTCCGGGGGAAATCAGCAGAAAGTCCTGATCTCCAAATGGCTGTGCTGTTGCCCGGAAGTGATTATTTTCGATGAACCTACCCGCGGCATCGACGTTGGCGCGAAAGCCGAAATTTACAAAGTGATGCGCCAACTGGCGGACGACGGAAAAGTCATCCTGATGGTGTCATCTGAACTACCTGAAATTATCACCGTCTGCGACCGCATCGCCGTGTTCTGCGAAGGACGACTGACGCAAATCCTGACGAATCGCGATGACATGAGCGAAGAGGAGATTATGGCATGGGCTTTACCACAAGAGTAA", 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"gene_synonym", - "alsB" - ], - [ - "gene_synonym", - "ASAP:ABE-0013398" - ], - [ - "gene_synonym", - "ECK4081" - ], - [ - "gene_synonym", - "GeneID:948604" - ], - [ - "gene_synonym", - "GI:16131914" - ], - [ - "gene_synonym", - "EcoGene:EG12458" - ], - [ - "gene_synonym", - "JW4049" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39265" - ], - [ - "gene_synonym", - "yjcX" - ] - ], - "dna_sequence": "ATGAATAAATATCTGAAATATTTCAGCGGCACACTCGTGGGCTTAATGTTGTCAACCAGCGCTTTTGCTGCCGCCGAATATGCTGTCGTATTGAAAACCCTCTCCAACCCATTTTGGGTAGATATGAAAAAAGGCATTGAAGATGAAGCAAAAACACTGGGCGTCAGCGTTGATATTTTTGCCTCTCCTTCAGAAGGCGATTTTCAATCTCAATTGCAGTTATTTGAAGATCTCAGTAATAAAAATTACAAAGGTATCGCCTTCGCTCCATTATCCTCAGTGAATCTGGTCATGCCTGTCGCCCGCGCATGGAAAAAAGGCATTTATCTGGTTAATCTCGATGAAAAAATCGACATGGATAATCTGAAAAAAGCTGGCGGCAATGTGGAAGCTTTTGTCACCACCGATAACGTTGCTGTCGGGGCGAAAGGCGCGTCGTTCATTATTGACAAATTGGGCGCTGAAGGTGGTGAAGTCGCAATCATTGAGGGTAAAGCCGGTAACGCCTCCGGTGAAGCGCGTCGTAATGGTGCCACCGAAGCCTTCAAAAAAGCAAGCCAGATCAAGCTTGTCGCCAGCCAGCCTGCCGACTGGGACCGCATTAAAGCACTGGATGTCGCCACTAACGTGTTGCAACGTAATCCGAATATTAAAGCGATCTATTGCGCGAATGACACGATGGCAATGGGTGTTGCTCAGGCAGTCGCAAACGCCGGAAAAACGGGAAAAGTGCTGGTCGTCGGTACAGATGGCATTCCGGAAGCCCGCAAAATGGTGGAAGCCGGACAAATGACCGCGACGGTTGCCCAGAACCCGGCGGATATCGGCGCAACGGGTCTGAAGCTGATGGTTGACGCTGAGAAATCCGGCAAGGTTATCCCGCTGGATAAAGCACCGGAATTTAAACTGGTCGATTCAATCCTGGTCACTCAATAA", - "dna_sequence_length": 936, - "functions": [ - "D-allose ABC transporter periplasmic binding protein" - ], - "id": "CDS_4006", - "location": [ - [ - "NC_000913", - 4312042, - "-", - 936 - ] - ], - "md5": "c1a8f6dee07b23eed3082667a7ae2f26", - "parent_gene": "", - "protein_md5": "367c7f7a706d76b2bc4909be5e2c30c4", - "protein_translation": "MNKYLKYFSGTLVGLMLSTSAFAAAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGAEGGEVAIIEGKAGNASGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKAPEFKLVDSILVTQ", - "protein_translation_length": 311, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013400" - ], - [ - "gene_synonym", - "b4089" - ], - [ - "gene_synonym", - "NP_418513.4" - ], - [ - "gene_synonym", - "rpiR" - ], - [ - "gene_synonym", - "GeneID:948603" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACS7" - ], - [ - "gene_synonym", - "alsR" - ], - [ - "gene_synonym", - "ECK4082" - ], - [ - "gene_synonym", - "JW4050" - ], - [ - "gene_synonym", - "EcoGene:EG12459" - ], - [ - "gene_synonym", - "GI:90111685" - ], - [ - "gene_synonym", - "yjcY" - ] - ], - "dna_sequence": "ATGAGCCAGTCAGAGTTTGATTCAGCGCTTCCGAACGGTATAGGGTTAGCGCCTTACCTGCGAATGAAGCAGGAAGGAATGACAGAAAATGAAAGCCGCATCGTGGAGTGGTTACTCAAACCCGGTAACCTGAGTTGTGCACCCGCAATTAAAGATGTCGCAGAAGCTCTGGCGGTATCTGAAGCGATGATAGTTAAGGTATCAAAGCTGCTGGGGTTTAGCGGCTTTCGTAACTTACGCAGTGCGCTGGAAGATTATTTTTCTCAGTCAGAACAGGTATTGCCTTCCGAGTTGGCTTTTGATGAAGCGCCGCAGGATGTGGTGAATAAGGTATTTAACATCACTTTACGCACCATTATGGAAGGTCAGTCGATCGTCAACGTTGATGAGATCCACCGTGCCGCCCGCTTTTTCTATCAGGCCAGACAGCGGGATTTGTACGGTGCCGGAGGATCAAATGCTATCTGTGCTGATGTACAGCACAAGTTCTTGCGCATTGGCGTACGCTGTCAGGCCTATCCTGATGCTCACATCATGATGATGTCCGCTTCGTTGTTACAGGAAGGAGATGTTGTGCTGGTAGTGACCCATTCCGGGCGAACCAGTGATGTAAAAGCGGCCGTAGAACTGGCAAAAAAGAACGGGGCAAAGATTATTTGTATAACCCATAGCTACCATTCACCGATAGCGAAACTGGCCGATTATATTATTTGCTCACCAGCCCCGGAAACGCCGTTATTAGGTCGTAATGCCTCGGCAAGAATATTACAACTAACTTTGCTGGACGCTTTTTTTGTCTCTGTCGCCCAGCTCAACATTGAACAAGCTAATATTAATATGCAAAAAACCGGCGCAATTGTTGATTTCTTCTCACCAGGCGCGCTGAAATAA", - "dna_sequence_length": 891, - "functions": [ - "d-allose-inducible als operon transcriptional repressor", - "autorepressor", - "repressor of rpiR" - ], - "id": "CDS_4007", - "location": [ - [ - "NC_000913", - 4312991, - "-", - 891 - ] - ], - "md5": "9d5332936a308d206132e47c46f90875", - "parent_gene": "", - "protein_md5": "d3aabd2bfef2d44bcfe52a4c266a95fb", - "protein_translation": "MSQSEFDSALPNGIGLAPYLRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNLRSALEDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAARFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDFFSPGALK", - "protein_translation_length": 296, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjcA" - ], - [ - "gene_synonym", - "GeneID:948602" - ], - [ - "gene_synonym", - "NP_418514.1" - ], - [ - "gene_synonym", - "rpiB" - ], - [ - "gene_synonym", - "ECK4083" - ], - [ - "gene_synonym", - "JW4051" - ], - [ - "gene_synonym", - "EcoGene:EG11827" - ], - [ - "gene_synonym", - "b4090" - ], - [ - "gene_synonym", - "ASAP:ABE-0013405" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37351" - ], - [ - "gene_synonym", - "alsI" - ], - [ - "gene_synonym", - "GI:16131916" - ], - [ - "gene_synonym", - "alsB" - ] - ], - "dna_sequence": "ATGAAAAAGATTGCATTTGGCTGTGATCATGTCGGTTTCATTTTAAAACATGAAATAGTGGCACATTTAGTTGAGCGTGGCGTTGAAGTGATTGATAAAGGAACCTGGTCGTCAGAGCGTACTGATTATCCACATTACGCCAGTCAAGTCGCACTGGCTGTTGCTGGCGGAGAGGTTGATGGCGGGATTTTGATTTGTGGTACTGGCGTCGGTATTTCGATAGCGGCGAACAAGTTTGCCGGAATTCGCGCGGTCGTCTGTAGCGAACCTTATTCCGCGCAACTTTCGCGGCAGCATAACGACACCAACGTGCTGGCTTTTGGTTCACGAGTGGTTGGCCTCGAACTGGCAAAAATGATTGTGGATGCGTGGCTGGGCGCACAGTACGAAGGCGGTCGTCATCAACAACGCGTGGAGGCGATTACGGCAATAGAGCAGCGGAGAAATTGA", - "dna_sequence_length": 450, - "functions": [ - "ribose 5-phosphate isomerase B/allose 6-phosphate isomerase" - ], - "id": "CDS_4008", - "location": [ - [ - "NC_000913", - 4313350, - "+", - 450 - ] - ], - "md5": "d2312aabdc04779961a3721632935119", - "parent_gene": "", - "protein_md5": "d4a5ef41f015a8393ca21129d4a09bca", - "protein_translation": "MKKIAFGCDHVGFILKHEIVAHLVERGVEVIDKGTWSSERTDYPHYASQVALAVAGGEVDGGILICGTGVGISIAANKFAGIRAVVCSEPYSAQLSRQHNDTNVLAFGSRVVGLELAKMIVDAWLGAQYEGGRHQQRVEAITAIEQRRN", - "protein_translation_length": 149, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjdP" - ], - [ - "gene_synonym", - "GeneID:2847754" - ], - [ - "gene_synonym", - "YP_026281.1" - ], - [ - "gene_synonym", - "b4487" - ], - [ - "gene_synonym", - "EcoGene:EG14407" - ], - [ - "gene_synonym", - "GI:49176458" - ], - [ - "gene_synonym", - "ECK4084" - ], - [ - "gene_synonym", - "JW5890" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q6BEX5" - ], - [ - "gene_synonym", - "ASAP:ABE-0174120" - ] - ], - "dna_sequence": "ATGAAACGCTTTCCGCTATTTCTTTTATTCACCCTGCTCACGCTGTCCACCGTTCCGGCCCAGGCCGATATTATCGACGACACCATTGGCAATATTCAGCAGGCGATTAATGACGCTTATAACCCTGACCGTGGGCGAGACTATGAAGATTCGCGCGACGACGGCTGGCAGCGTGAAGTGAGCGACGATCGGCGCAGACAATATGACGACCGCCGCCGCCAGTTTGAAGATCGCCGCAGGCAGCTGGACGATCGCCAGCGCCAGCTTGATCAGGAGCGTCGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGA", - "dna_sequence_length": 330, - "functions": [ - "putative periplasmic protein" - ], - "id": "CDS_4009", - "location": [ - [ - "NC_000913", - 4313868, - "+", - 330 - ] - ], - "md5": "7e5902e5f1bf91c46a9b8b2682684a10", - "parent_gene": "", - "protein_md5": "ed39301cd6fd38cfef9b149e911ba158", - "protein_translation": "MKRFPLFLLFTLLTLSTVPAQADIIDDTIGNIQQAINDAYNPDRGRDYEDSRDDGWQREVSDDRRRQYDDRRRQFEDRRRQLDDRQRQLDQERRQLEDEERRMEDEYGR", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131918" - ], - [ - "gene_synonym", - "phnP" - ], - [ - "gene_synonym", - "ECK4085" - ], - [ - "gene_synonym", - "GeneID:948600" - ], - [ - "gene_synonym", - "ASAP:ABE-0013412" - ], - [ - "gene_synonym", - "JW4053" - ], - [ - "gene_synonym", - "EcoGene:EG10725" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16692" - ], - [ - "gene_synonym", - "b4092" - ], - [ - "gene_synonym", - "NP_418516.1" - ] - ], - "dna_sequence": "ATGAGCCTGACCCTCACGCTCACCGGCACCGGCGGCGCACAGGGCGTTCCGGCATGGGGCTGCGAGTGTGCGGCCTGCGCCAGAGCGCGGCGCTCGCCGCAGTATCGCCGCCAACCGTGCAGCGGCGTAGTGAAGTTTAACGACGCAATCACCCTGATCGACGCCGGGCTGCACGATCTCGCCGATCGCTGGTCGCCCGGATCGTTCCAGCAGTTTTTGCTGACGCATTATCATATGGATCACGTCCAGGGGCTGTTTCCGCTGCGCTGGGGCGTTGGCGATCCGATCCCGGTTTACGGCCCGCCGGATGAACAGGGCTGCGACGATCTGTTTAAACATCCGGGCCTGCTTGATTTCAGCCACACGGTGGAACCGTTTGTGGTGTTTGATTTGCAGGGGTTACAGGTCACGCCCCTGCCGCTCAACCACTCAAAACTGACCTTCGGTTATCTGCTGGAAACGGCACACAGCCGGGTGGCGTGGCTGTCTGACACCGCAGGCTTGCCGGAAAAAACGCTGAAATTTTTACGCAATAATCAGCCGCAGGTAATGGTGATGGATTGCAGTCACCCGCCGCGCGCGGATGCACCGCGTAATCACTGTGATTTAAATACCGTGCTTGCGCTGAATCAGGTTATCCGCTCGCCACGGGTGATTCTGACCCATATCAGCCACCAGTTTGATGCGTGGCTGATGGAAAACGCACTACCGTCAGGGTTTGAGGTGGGGTTTGATGGGATGGAGATTGGGGTGGCGTGA", - "dna_sequence_length": 759, - "functions": [ - "5-phospho-alpha-D-ribosyl 1,2-cyclic phosphate phosphodiesterase" - ], - "id": "CDS_4010", - "location": [ - [ - "NC_000913", - 4315102, - "-", - 759 - ] - ], - "md5": "cddfe9c368a678a56de209a6597b1150", - "parent_gene": "", - "protein_md5": "b78865cfd1ba33680a0dcdab78be6953", - "protein_translation": "MSLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGLHDLADRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGCDDLFKHPGLLDFSHTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHISHQFDAWLMENALPSGFEVGFDGMEIGVA", - "protein_translation_length": 252, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16131919" - ], - [ - "gene_synonym", - "GeneID:948599" - ], - [ - "gene_synonym", - "NP_418517.1" - ], - [ - "gene_synonym", - "ECK4086" - ], - [ - "gene_synonym", - "JW4054" - ], - [ - "gene_synonym", - "EcoGene:EG10724" - ], - [ - "gene_synonym", - "ASAP:ABE-0013415" - ], - [ - "gene_synonym", - "b4093" - ], - [ - "gene_synonym", - "phnO" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16691" - ] - ], - "dna_sequence": "ATGCCTGCTTGTGAGCTTCGCCCGGCCACGCAGTACGACACCGACGCGGTTTACGCGCTGATTTGTGAGCTAAAACAGGCGGAGTTTGACCACCACGCGTTTCGCGTGGGTTTTAACGCCAATCTGCGCGACCCAAACATGCGCTACCATCTGGCGCTGCTTGATGGCGAAGTTGTCGGCATGATCGGCCTGCATTTGCAGTTTCATCTGCATCATGTCAACTGGATCGGCGAAATTCAGGAGTTGGTGGTAATGCCGCAGGCGCGCGGTCTGAACGTCGGCAGTAAGTTACTGGCGTGGGCAGAAGAAGAAGCCCGCCAGGCCGGGGCCGAAATGACCGAACTTTCGACCAACGTGAAGCGCCACGACGCGCACCGTTTCTATCTGCGCGAAGGCTACGAGCAGAGCCACTTCCGCTTCACCAAGGCGCTGTAA", - "dna_sequence_length": 435, - "functions": [ - "aminoalkylphosphonate N-acetyltransferase" - ], - "id": "CDS_4011", - "location": [ - [ - "NC_000913", - 4315538, - "-", - 435 - ] - ], - "md5": "f9765167af9731273b8c4cdc92ee7b7c", - "parent_gene": "", - "protein_md5": "ed97bda1e25dac2e0837706ae13d09cb", - "protein_translation": "MPACELRPATQYDTDAVYALICELKQAEFDHHAFRVGFNANLRDPNMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHFRFTKAL", - "protein_translation_length": 144, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948608" - ], - [ - "gene_synonym", - "ECK4087" - ], - [ - "gene_synonym", - "NP_418518.1" - ], - [ - "gene_synonym", - "b4094" - ], - [ - "gene_synonym", - "EcoGene:EG10723" - ], - [ - "gene_synonym", - "GI:16131920" - ], - [ - "gene_synonym", - "JW4055" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16690" - ], - [ - "gene_synonym", - "phnN" - ], - [ - "gene_synonym", - "ASAP:ABE-0013417" - ] - ], - "dna_sequence": "ATGATGGGAAAACTGATTTGGTTAATGGGGCCGTCCGGCTCCGGGAAAGACAGCCTGCTGGCGGAACTCCGCCTGCGGGAACAAACTCAGTTACTGGTGGCGCATCGCTACATCACGCGCGATGCCAGCGCCGGAAGTGAAAACCATATCGCCCTGAGCGAGCAGGAGTTTTTTACCCGCGCGGGGCAAAATCTGTTGGCCTTAAGCTGGCACGCTAACGGTCTGTATTATGGCGTCGGCGTCGAGATTGATCTCTGGCTGCACGCCGGATTCGACGTGCTGGTCAACGGCTCACGCGCCCATCTGCCGCAGGCGCGGGCGCGCTATCAATCGGCGCTGCTGCCCGTCTGTTTACAGGTTTCGCCGGAGATCCTCCGCCAGCGCCTGGAAAACCGTGGCCGTGAAAACGCCAGTGAAATTAACGCCCGCCTGGCGCGCGCCGCCCGCTATACTCCACAGGATTGCCATACGCTCAACAATGACGGCAGCCTGCGCCAGTCGGTCGACACGCTGCTGACGCTGATCCATCAGAAGGAGAAACACCATGCCTGCTTGTGA", - "dna_sequence_length": 558, - "functions": [ - "ribose 1,5-bisphosphokinase" - ], - "id": "CDS_4012", - "location": [ - [ - "NC_000913", - 4316082, - "-", - 558 - ] - ], - "md5": "b120b3910efc6ed3b7d208e76b829386", - "parent_gene": "", - "protein_md5": "8e79cf4423fe4c80a00344ead74f5e9c", - "protein_translation": "MMGKLIWLMGPSGSGKDSLLAELRLREQTQLLVAHRYITRDASAGSENHIALSEQEFFTRAGQNLLALSWHANGLYYGVGVEIDLWLHAGFDVLVNGSRAHLPQARARYQSALLPVCLQVSPEILRQRLENRGRENASEINARLARAARYTPQDCHTLNNDGSLRQSVDTLLTLIHQKEKHHACL", - "protein_translation_length": 185, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4088" - ], - [ - "gene_synonym", - "GeneID:948613" - ], - [ - "gene_synonym", - "NP_418519.1" - ], - [ - "gene_synonym", - "b4095" - ], - [ - "gene_synonym", - "EcoGene:EG10722" - ], - [ - "gene_synonym", - "GI:16131921" - ], - [ - "gene_synonym", - "JW4056" - ], - [ - "gene_synonym", - "ASAP:ABE-0013419" - ], - [ - "gene_synonym", - "phnM" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16689" - ] - ], - "dna_sequence": "ATGATTATCAATAACGTTAAGCTGGTGCTGGAAAACGAGGTGGTAAGCGGTTCGCTGGAGGTGCAGAACGGCGAAATCCGCGCCTTTGCCGAAAGCCAGAGCCGCCTGCCGGAGGCGATGGACGGCGAAGGCGGCTGGCTGCTGCCGGGGCTGATTGAGCTGCATACCGATAATCTGGATAAATTCTTCACCCCGCGCCCGAAAGTTGACTGGCCTGCCCACTCGGCGATGAGCAGCCACGACGCGCTGATGGTGGCGAGCGGCATCACCACCGTACTGGATGCCGTGGCAATTGGCGACGTGCGCGACGGCGGCGATCGGCTGGAGAATCTGGAGAAGATGATCAACGCCATCGAAGAGACGCAGAAACGCGGCGTCAACCGCGCCGAGCACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCGAGCCGGTGACGCTGGTGTCGCTGATGGACCACTCGCCGGGCCAGCGCCAGTTCGCCAACCGCGAGAAGTATCGCGAATATTATCAGGGCAAATACTCCCTCACTGATGCGCAGATGCAGCAGTACGAAGAAGAGCAACTGGCGCTCGCCGCACGCTGGTCGCAGCCGAATCGCGAATCCATCGCCGCCCTGTGCCGCGCGCGAAAAATTGCGCTTGCCAGCCACGATGACGCCACCCACGCCCACGTTGCTGAATCTCACCAGCTTGGCAGCGTGATCGCCGAATTTCCCACCACGTTCGAAGCGGCGGAAGCCTCGCGCAAGCATGGCATGAACGTGCTGATGGGCGCGCCGAATATTGTGCGCGGCGGCTCGCACTCCGGCAACGTGGCGGCCAGTGAACTGGCGCAGCTTGGCCTGCTGGATATCCTCTCTTCCGACTACTACCCCGCCAGCCTGCTCGATGCGGCATTTCGCGTCGCCGATGACCAGAGCAACCGCTTTACGCTGCCGCAGGCGGTGAAGCTGGTGACTAAAAATCCAGCGCAGGCGCTTAATCTCCAGGATCGCGGGGTGATTGGCGAGGGCAAACGCGCCGACCTGGTGCTGGCGCATCGCAAGGACAATCATATTCATATCGACCACGTCTGGCGTCAGGGTAAAAGGGTGTTCTGA", - "dna_sequence_length": 1137, - "functions": [ - "ribophosphonate triphosphate hydrolase" - ], - "id": "CDS_4013", - "location": [ - [ - "NC_000913", - 4317218, - "-", - 1137 - ] - ], - "md5": "5ca7b3fa728f83663f17152515d74989", - "parent_gene": "", - "protein_md5": "1b752d921d7767d0ba56f0be4f42221c", - "protein_translation": "MIINNVKLVLENEVVSGSLEVQNGEIRAFAESQSRLPEAMDGEGGWLLPGLIELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLDAVAIGDVRDGGDRLENLEKMINAIEETQKRGVNRAEHRLHLRCELPHHTTLPLFEKLVQREPVTLVSLMDHSPGQRQFANREKYREYYQGKYSLTDAQMQQYEEEQLALAARWSQPNRESIAALCRARKIALASHDDATHAHVAESHQLGSVIAEFPTTFEAAEASRKHGMNVLMGAPNIVRGGSHSGNVAASELAQLGLLDILSSDYYPASLLDAAFRVADDQSNRFTLPQAVKLVTKNPAQALNLQDRGVIGEGKRADLVLAHRKDNHIHIDHVWRQGKRVF", - "protein_translation_length": 378, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948612" - ], - [ - "gene_synonym", - "ECK4089" - ], - [ - "gene_synonym", - "JW4057" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16679" - ], - [ - "gene_synonym", - "EcoGene:EG10721" - ], - [ - "gene_synonym", - "b4096" - ], - [ - "gene_synonym", - "GI:16131922" - ], - [ - "gene_synonym", - "NP_418520.1" - ], - [ - "gene_synonym", - "phnL" - ], - [ - "gene_synonym", - "ASAP:ABE-0013421" - ] - ], - "dna_sequence": "ATGATTAACGTACAAAACGTCAGTAAAACCTTCATCCTGCACCAGCAAAACGGCGTGCGCCTGCCCGTCCTCAATCGCGCCTCGCTCACCGTCAACGCGGGCGAATGCGTGGTGCTCCACGGCCATTCCGGCAGCGGCAAATCAACTCTGCTACGCTCGCTGTACGCCAACTATCTGCCCGACGAAGGTCAAATCCAGATCAAACACGGTGACGAGTGGGTAGACCTGGTCACCGCGCCAGCGCGCAAAGTGGTGGAAATCCGCAAAACCACCGTCGGCTGGGTGAGCCAGTTTCTGCGCGTCATCCCGCGTATCTCAGCACTGGAAGTGGTGATGCAGCCGCTGCTCGATACCGGCGTTCCGCGTGAAGCCTGCGCCGCTAAAGCCGCGCGTCTTCTCACCCGCCTGAACGTGCCGGAACGCCTGTGGCACCTGGCACCATCGACATTTTCCGGTGGCGAACAGCAGCGCGTCAACATCGCCCGCGGCTTTATCGTCGACTACCCCATTCTGCTGCTTGACGAACCTACCGCCTCGCTGGACGCCAAAAACAGCGCCGCGGTGGTGGAACTGATTCGCGAAGCCAAAACCCGTGGCGCAGCCATCGTAGGCATCTTCCATGACGAAGCTGTACGTAATGACGTCGCCGACCGCCTGCACCCAATGGGAGCCTCTTCATGA", - "dna_sequence_length": 681, - "functions": [ - "ribophosphonate triphosphate synthase subunit", - "putative ABC transporter-related ATPase" - ], - "id": "CDS_4014", - "location": [ - [ - "NC_000913", - 4317895, - "-", - 681 - ] - ], - "md5": "0c3957dec627890c302d544fa1b65bcf", - "parent_gene": "", - "protein_md5": "a87e00c8eb66ddf48c9ad997f1c6554a", - "protein_translation": "MINVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGASS", - "protein_translation_length": 226, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_026282.1" - ], - [ - "gene_synonym", - "GeneID:948611" - ], - [ - "gene_synonym", - "GI:49176459" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16678" - ], - [ - "gene_synonym", - "ECK4090" - ], - [ - "gene_synonym", - "EcoGene:EG10720" - ], - [ - "gene_synonym", - "ASAP:ABE-0013424" - ], - [ - "gene_synonym", - "b4097" - ], - [ - "gene_synonym", - "phnK" - ], - [ - "gene_synonym", - "JW5727" - ] - ], - "dna_sequence": "ATGAATCAACCGTTACTTTCGGTCAATAACCTGACCCACCTTTACGCGCCGGGCAAAGGCTTTAGCGATGTCTCTTTTGATTTATGGCCGGGGGAAGTGCTGGGCATTGTCGGGGAATCCGGCTCCGGGAAGACCACGCTGCTGAAGTCGATCTCCGCGCGCCTGACGCCGCAGCAGGGGGAAATTCACTACGAGAACCGTTCGCTGTATGCAATGAGCGAGGCCGACCGCCGTCGCCTGCTGCGTACCGAATGGGGCGTGGTGCATCAGCATCCACTCGACGGCCTGCGCCGCCAGGTGTCGGCAGGCGGCAATATCGGCGAGCGGCTGATGGCGACCGGGGCACGTCATTACGGCGATATTCGTGCCACCGCGCAGAAGTGGCTGGAAGAGGTGGAGATTCCCGCCAACCGGATCGACGACCTGCCGACCACCTTTTCCGGCGGTATGCAGCAGCGTTTGCAGATTGCCCGCAACCTGGTGACGCATCCGAAGCTGGTGTTTATGGATGAACCGACCGGCGGGCTGGATGTGTCGGTGCAGGCCCGCCTGCTCGACCTGCTGCGCGGCCTGGTGGTGGAGCTGAACCTCGCGGTGGTGATTGTCACCCATGATTTAGGCGTCGCCCGCCTGCTGGCGGACCGTTTGCTGGTGATGAAGCAGGGGCAAGTGGTGGAGAGTGGGTTAACCGACCGCGTGCTCGACGACCCGCATCATCCGTATACACAGCTGCTGGTGTCATCGGTTTTGCAGAATTGA", - "dna_sequence_length": 759, - "functions": [ - "carbon-phosphorus lyase complex subunit, putative ATP transporter ATP-binding protein" - ], - "id": "CDS_4015", - "location": [ - [ - "NC_000913", - 4318764, - "-", - 759 - ] - ], - "md5": "076dc3cb2b121617cb0487612bf9e752", - "parent_gene": "", - "protein_md5": "61b241bb2a88b10c6874b7bcb0dd22e5", - "protein_translation": "MNQPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGKTTLLKSISARLTPQQGEIHYENRSLYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSAGGNIGERLMATGARHYGDIRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLVMKQGQVVESGLTDRVLDDPHHPYTQLLVSSVLQN", - "protein_translation_length": 252, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013426" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16688" - ], - [ - "gene_synonym", - "NP_418522.1" - ], - [ - "gene_synonym", - "phnJ" - ], - [ - "gene_synonym", - "GeneID:948606" - ], - [ - "gene_synonym", - "ECK4091" - ], - [ - "gene_synonym", - "GI:16131924" - ], - [ - "gene_synonym", - "JW4059" - ], - [ - "gene_synonym", - "b4098" - ], - [ - "gene_synonym", - "EcoGene:EG10719" - ] - 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[ - [ - "NC_000913", - 4319606, - "-", - 846 - ] - ], - "md5": "68394bb29742859ae9dfd817c23881d1", - "parent_gene": "", - "protein_md5": "0f13a80e5737f0674b77598e88928e8c", - "protein_translation": "MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKNQ", - "protein_translation_length": 281, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4092" - ], - [ - "gene_synonym", - "GeneID:948605" - ], - [ - "gene_synonym", - "GI:16131925" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16687" - ], - [ - "gene_synonym", - "JW4060" - ], - [ - "gene_synonym", - "NP_418523.1" - ], - [ - "gene_synonym", - "EcoGene:EG10718" - ], - [ - "gene_synonym", - "b4099" - ], - [ - "gene_synonym", - "ASAP:ABE-0013428" - ], - [ - "gene_synonym", - "phnI" - ] - ], - "dna_sequence": "ATGTACGTTGCCGTGAAAGGGGGCGAGAAGGCGATCGACGCCGCCCACGCCCTGCAAGAGAGCCGACGCCGAGGCGATACCGATTTGCCCGAACTGAGCGTCGCCCAGATTGAACAGCAGCTTAACCTCGCGGTAGATCGCGTGATGACCGAAGGCGGCATTGCCGACCGCGAACTGGCGGCGCTGGCGCTGAAACAGGCCAGCGGCGATAACGTTGAAGCGATTTTCCTGCTGCGCGCCTACCGCACCACGTTGGCGAAGCTGGCGGTAAGCGAGCCGCTCGACACCACCGGGATGCGTCTCGAACGCCGTATCTCCGCCGTTTATAAAGACATTCCCGGCGGCCAGCTGCTTGGCCCAACCTACGACTACACCCATCGCCTGCTCGATTTTACCCTGCTGGCAAACGGCGAAGCGCCGACGCTGACCACCGCCGACAGCGAACAGCAGCCGTCGCCGCACGTTTTCAGCCTGCTGGCGCGTCAGGGGCTGGCGAAGTTTGAAGAGGATAGCGGCGCACAGCCGGATGACATCACCCGCACGCCGCCGGTTTACCCCTGCTCACGCTCCTCCCGTTTGCAGCAGTTGATGCGCGGCGACGAAGGCTATTTGCTGGCGCTGGCCTACTCCACCCAACGCGGTTACGGGCGCAATCACCCGTTCGCAGGCGAGATCCGCAGCGGCTATATCGACGTGTCGATTGTGCCGGAAGAGCTGGGATTTGCGGTGAACGTCGGCGAACTGCTGATGACTGAGTGTGAAATGGTTAACGGTTTTATCGACCCGCCGGGTGAGCCGCCGCACTTCACGCGCGGCTACGGGCTGGTGTTCGGCATGAGCGAGCGCAAAGCGATGGCGATGGCGCTGGTCGACCGCGCTCTGCAAGCCCCGGAGTACGGCGAGCACGCGACAGGCCCGGCGCAGGATGAAGAGTTCGTGCTGGCACATGCCGACAACGTCGAAGCCGCAGGCTTTGTCTCACACCTCAAACTCCCCCACTACGTCGATTTCCAGGCCGAACTGGAGCTACTCAAACGTCTGCAACAGGAGCAGAACCATGGCTAA", 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"gene_synonym", - "NP_418524.1" - ], - [ - "gene_synonym", - "JW4061" - ], - [ - "gene_synonym", - "EcoGene:EG10717" - ], - [ - "gene_synonym", - "ASAP:ABE-0013430" - ], - [ - "gene_synonym", - "b4100" - ], - [ - "gene_synonym", - "phnH" - ] - ], - "dna_sequence": "ATGACCCTGGAAACCGCTTTTATGCTTCCCGTGCAGGATGCCCAGCACAGTTTTCGTCGCCTGTTAAAGGCCATGAGCGAGCCGGGCGTGATTGTCGCCCTGCATCAGCTCAAACGCGGCTGGCAACCGCTGAATATCGCCACCACCAGCGTGCTGCTGACGCTGGCCGATAACGACACGCCGGTGTGGCTTTCTACCCCATTAAATAACGATATCGTCAACCAGAGCCTGCGTTTTCATACCAACGCGCCGCTGGTCAGCCAGCCGGAACAGGCGACCTTCGCGGTGACGGATGAGGCGATTTCCAGCGAACAGCTCAACGCCCTTTCCACCGGCACCGCCGTTGCGCCGGAAGCGGGTGCGACGCTGATTTTACAGGTCGCCAGCCTGAGCGGCGGACGCATGTTGCGCCTTACTGGTGCGGGTATTGCCGAAGAACGAATGATCGCTCCGCAGCTGCCGGAGTGCATTCTGCACGAACTCACCGAGCGCCCGCATCCGTTCCCGCTCGGCATCGACCTGATCCTGACCTGTGGCGAGCGCCTGCTGGCTATTCCGCGAACCACTCATGTGGAGGTGTGCTGA", - "dna_sequence_length": 585, - "functions": [ - "ribophosphonate triphosphate synthase subunit" - ], - "id": "CDS_4018", - "location": [ - [ - "NC_000913", - 4321247, - "-", - 585 - ] - ], - "md5": "7e49147880dbd71e78c49d6f2d6ba94c", - "parent_gene": "", - "protein_md5": "22350176e87775db2c0aa7035f23200b", - "protein_translation": "MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLSTPLNNDIVNQSLRFHTNAPLVSQPEQATFAVTDEAISSEQLNALSTGTAVAPEAGATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHELTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC", - "protein_translation_length": 194, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948618" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16685" - ], - [ - "gene_synonym", - "ECK4094" - ], - [ - "gene_synonym", - "phnG" - ], - [ - "gene_synonym", - "EcoGene:EG10716" - ], - [ - "gene_synonym", - "GI:16131927" - ], - [ - "gene_synonym", - "NP_418525.1" - ], - [ - "gene_synonym", - "JW4062" - ], - [ - "gene_synonym", - "ASAP:ABE-0013433" - ], - [ - "gene_synonym", - "b4101" - ] - ], - "dna_sequence": "ATGCACGCAGATACCGCGACCCGCCAGCACTGGATGTCCGTGCTGGCGCACAGCCAACCGGCTGAACTGGCAGCACGCCTGAACGCGCTAAACATCACCGCCGACTATGAGGTGATCCGCGCCGCTGAAACTGGCCTGGTACAGATTCAGGCGCGGATGGGCGGCACCGGCGAACGTTTTTTTGCCGGCGACGCCACGCTGACCCGCGCCGCCGTGCGCCTGACTGACGGCACGCTCGGCTACAGCTGGGTGCAGGGGCGTGATAAACAGCACGCCGAACGCTGCGCGCTGATTGACGCGCTGATGCAGCAATCTCGCCACTTTCAAAACTTATCAGAAACCCTTATTGCCCCGCTGGACGCTGACCGTATGGCACGCATTGCCGCACGCCAGGCCGAAGTGAACGCCAGCCGGGTCGACTTCTTTACGATGGTTCGCGGAGACAACGCATGA", - "dna_sequence_length": 453, - "functions": [ - "ribophosphonate triphosphate synthase subunit" - ], - "id": "CDS_4019", - "location": [ - [ - "NC_000913", - 4321696, - "-", - 453 - ] - ], - "md5": "28075c47f87fb1c255d00a1d09536c11", - "parent_gene": "", - "protein_md5": "1c69ff60d02136dde58a5ff5288e504f", - "protein_translation": "MHADTATRQHWMSVLAHSQPAELAARLNALNITADYEVIRAAETGLVQIQARMGGTGERFFAGDATLTRAAVRLTDGTLGYSWVQGRDKQHAERCALIDALMQQSRHFQNLSETLIAPLDADRMARIAARQAEVNASRVDFFTMVRGDNA", - "protein_translation_length": 150, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418526.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013435" - ], - [ - "gene_synonym", - "ECK4095" - ], - [ - "gene_synonym", - "GeneID:948617" - ], - [ - "gene_synonym", - "phnF" - ], - [ - "gene_synonym", - "EcoGene:EG10715" - ], - [ - "gene_synonym", - "JW4063" - ], - [ - "gene_synonym", - "b4102" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16684" - ], - [ - "gene_synonym", - "GI:16131928" - ] - ], - "dna_sequence": "ATGCACTTGTCTACACATCCGACCAGCTACCCAACACGCTATCAAGAGATAGCCGCAAAACTTGAGCAGGAGCTTCGTCAACACTACCGCTGCGGCGACTATCTTCCCGCCGAGCAGCAACTGGCAGCGCGCTTTGAGGTGAATCGCCACACCCTGCGCCGCGCCATCGACCAACTGGTGGAAAAAGGCTGGGTACAGCGCCGTCAGGGCGTCGGCGTGCTGGTGCTGATGCGCCCGTTCGATTACCCGCTCAACGCCCAGGCGCGTTTTAGCCAGAATCTGCTGGATCAGGGCAGCCATCCCACCAGCGAAAAACTGCTTTCGGTATTGCGCCCCGCGTCCGGCCACGTCGCTGACGCACTGGGGATTACCGAGGGGGAGAACGTCATCCACCTGCGCACCCTGCGTCGTGTCAACGGCGTCGCGCTCTGTTTAATCGACCACTACTTCGCGGACCTCACCCTCTGGCCGACGCTGCAACGCTTCGACAGCGGCTCGCTGCACGATTTTCTGCGCGAGCAAACCGGAATTGCGCTGCGCCGCAGCCAGACGCGGATCAGCGCCCGCCGCGCCCAGGCCAAAGAGTGCCAGCGTCTTGAAATCCCGAATATGTCGCCGCTGCTGTGCGTGCGCACCCTTAACCACCGTGACGGTGAAAGCAGCCCGGCGGAGTACTCCGTCAGCCTGACGCGCGCCGACATGATTGAATTCACTATGGAGCACTGA", - "dna_sequence_length": 726, - "functions": [ - "putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation" - ], - "id": "CDS_4020", - "location": [ - [ - "NC_000913", - 4322422, - "-", - 726 - ] - ], - "md5": "a69c0f225fae756ec99381f25b211c30", - "parent_gene": "", - "protein_md5": "289a3f4638cace139158e1e465e15ff6", - "protein_translation": "MHLSTHPTSYPTRYQEIAAKLEQELRQHYRCGDYLPAEQQLAARFEVNRHTLRRAIDQLVEKGWVQRRQGVGVLVLMRPFDYPLNAQARFSQNLLDQGSHPTSEKLLSVLRPASGHVADALGITEGENVIHLRTLRRVNGVALCLIDHYFADLTLWPTLQRFDSGSLHDFLREQTGIALRRSQTRISARRAQAKECQRLEIPNMSPLLCVRTLNHRDGESSPAEYSVSLTRADMIEFTMEH", - "protein_translation_length": 241, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948625" - ], - [ - "gene_synonym", - "ECK4096" - ], - [ - "gene_synonym", - "ASAP:ABE-0013439" - ], - [ - "gene_synonym", - "JW4064" - ], - [ - "gene_synonym", - "phnE" - ], - [ - "gene_synonym", - "b4104" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16683" - ], - [ - "gene_synonym", - "EcoGene:EG11283" - ], - [ - "gene_synonym", - "ASAP:ABE-0013437" - ] - ], - "dna_sequence": "ATGCAAACCATCACCATCGCCCCACCCAAGCGCAGCTGGTTCTCGCTTCTGAGCTGGGCCGTTGTACTCGCCGTGTTGGTCGTCTCGTGGCAGGGCGCGGAAATGGCCCCGCTTACGCTGATCAAAGACGGCGGCAACATGGCGACGTTCGCCGCCGACTTCTTCCCGCCCGATTTCAGCCAGTGGCAGGATTACCTCACCGAAATGGCCGTCACGCTGCAAATCGCCGTCTGGGGCACCGCGCTGGCGGTGGTTCTCTCCATCCCCTTTGGCCTGATGAGCGCCGAAAACCTGGTGCCGTGGTGGGTTTACCAGCCCGTTCGCCGCCTGATGGACGCCTGCCGCGCCATTAACGAAATGGTCTTCGCCATGCTGTTCGTGGTCGCCGTCGGCCTCGGCCCGTTCGCTGGCGTGCTGGCGTGCTGGGGCGTGCTGGCGCTGTTTATCCACACCACCGGCGTGCTCTCCAAGCTGCTTTCCGAAGCGGTGGAAGCGATTGAGCCCGGCCCGGTGGAAGGCATTCGCGCCACCGGTGCCAACAAGCTCGAAGAGATCCTCTACGGCGTGCTGCCACAGGTGATGCCACTGCTGATCTCCTACTCCCTCTATCGCTTCGAATCCAACGTCCGCTCGGCGACCGTCGTCGGCATGGTCGGCGCAGGCGGGATCGGCGTCACCCTGTGGGAAGCGATTCGCGGTTTCCAGTTCCAACAAACCTGCGCCCTGATGGTGCTTATCATCGTCACGGTCAGCCTGCTGGATTTCCTCTCTCAACGGTTGCGTAAGCACTTTATCTGA", - "dna_sequence_length": 798, - "id": "CDS_4021", - "location": [ - [ - "NC_000913", - 4323230, - "-", - 426 - ], - [ - "NC_000913", - 4322814, - "-", - 372 - ] - ], - "md5": "3158c470db9c22da957fc9fd89a5f210", - "parent_gene": "", - "protein_md5": "5308139fd777c5f0b89b0ac9bd78bc04", - "protein_translation": "MQTITIAPPKRSWFSLLSWAVVLAVLVVSWQGAEMAPLTLIKDGGNMATFAADFFPPDFSQWQDYLTEMAVTLQIAVWGTALAVVLSIPFGLMSAENLVPWWVYQPVRRLMDACRAINEMVFAMLFVVAVGLGPFAGVLACWGVLALFIHTTGVLSKLLSEAVEAIEPGPVEGIRATGANKLEEILYGVLPQVMPLLISYSLYRFESNVRSATVVGMVGAGGIGVTLWEAIRGFQFQQTCALMVLIIVTVSLLDFLSQRLRKHFI", - "protein_translation_length": 265, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "psiD" - ], - [ - "gene_synonym", - "NP_418529.1" - ], - [ - "gene_synonym", - "GeneID:948624" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16682" - ], - [ - "gene_synonym", - "ECK4098" - ], - [ - "gene_synonym", - "EcoGene:EG10714" - ], - [ - "gene_synonym", - "phnD" - ], - [ - "gene_synonym", - "JW4066" - ], - [ - "gene_synonym", - "GI:16131931" - ], - [ - "gene_synonym", - "ASAP:ABE-0013442" - ], - [ - "gene_synonym", - "b4105" - ] - ], - "dna_sequence": "ATGAACGCTAAGATAATTGCCTCGCTGGCCTTCACCAGCATGTTCAGCCTCAGCACCCTGTTAAGCCCGGCGCACGCCGAAGAGCAGGAAAAGGCGTTGAATTTCGGCATTATTTCAACGGAATCACAGCAAAACCTGAAACCGCAATGGACGCCGTTCTTGCAGGATATGGAGAAGAAGCTGGGCGTGAAGGTCAACGCCTTCTTTGCCCCGGACTACGCGGGCATTATCCAGGGGATGCGCTTCAATAAAGTGGATATCGCCTGGTACGGCAATCTGTCGGCGATGGAAGCGGTGGATCGCGCCAATGGCCAGGTCTTCGCCCAGACGGTCGCGGCGGATGGATCGCCGGGTTACTGGAGCGTGTTGATCGTCAACAAAGACAGTCCGATCAACAACCTGAACGATCTGCTGGCGAAGCGGAAAGATCTCACCTTTGGCAATGGCGATCCTAACTCCACCTCTGGCTTCCTCGTCCCCGGCTACTACGTCTTCGCCAAAAACAATATCTCCGCCAGCGACTTCAAGCGCACCGTCAACGCCGGGCATGAAACCAACGCGCTGGCCGTCGCCAACAAGCAGGTGGATGTTGCCACCAACAACACCGAAAACCTCGACAAGCTGAAAACCTCCGCGCCAGAGAAGCTGAAAGAACTGAAGGTGATCTGGAAGTCGCCGCTGATCCCAGGCGATCCGATCGTCTGGCGCAAGAATCTTTCCGAAACCACCAAAGACAAGATCTACGACTTCTTTATGAACTACGGCAAAACGCCGGAAGAAAAAGCGGTGCTGGAACGCCTGGGCTGGGCGCCATTCCGCGCTTCCAGCGACCTGCAACTGGTGCCGATTCGCCAGCTCGCGCTGTTTAAAGAGATGCAGGGCGTGAAAAGCAATAAAGGACTGAATGAGCAGGACAAGCTGGCAAAAACCACCGAGATTCAGGCGCAGCTGGATGACCTGGACCGCCTGAACAACGCGCTAAGCGCGATGAGTTCGGTGAGTAAAGCGGTGCAGTAA", - "dna_sequence_length": 1017, - "functions": [ - "phosphonate ABC transporter periplasmic binding protein" - ], - "id": "CDS_4022", - "location": [ - [ - "NC_000913", - 4324352, - "-", - 1017 - ] - ], - "md5": "d39fa2733d00e6ae08235c0c44a5629c", - "parent_gene": "", - "protein_md5": "82913b8f4968401e1b65d62df6913dc2", - "protein_translation": "MNAKIIASLAFTSMFSLSTLLSPAHAEEQEKALNFGIISTESQQNLKPQWTPFLQDMEKKLGVKVNAFFAPDYAGIIQGMRFNKVDIAWYGNLSAMEAVDRANGQVFAQTVAADGSPGYWSVLIVNKDSPINNLNDLLAKRKDLTFGNGDPNSTSGFLVPGYYVFAKNNISASDFKRTVNAGHETNALAVANKQVDVATNNTENLDKLKTSAPEKLKELKVIWKSPLIPGDPIVWRKNLSETTKDKIYDFFMNYGKTPEEKAVLERLGWAPFRASSDLQLVPIRQLALFKEMQGVKSNKGLNEQDKLAKTTEIQAQLDDLDRLNNALSAMSSVSKAVQ", - "protein_translation_length": 338, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16677" - ], - [ - "gene_synonym", - "GeneID:948623" - ], - [ - "gene_synonym", - "ECK4099" - ], - [ - "gene_synonym", - "ASAP:ABE-0013444" - ], - [ - "gene_synonym", - "JW4067" - ], - [ - "gene_synonym", - "phnC" - ], - [ - "gene_synonym", - "EcoGene:EG10713" - ], - [ - "gene_synonym", - "NP_418530.1" - ], - [ - "gene_synonym", - "b4106" - ], - [ - "gene_synonym", - "GI:16131932" - ] - ], - "dna_sequence": "ATGCAAACGATTATCCGTGTCGAGAAGCTCGCCAAAACCTTCAATCAGCATCAGGCGCTGCATGCGGTTGATCTGAACATTCATCACGGTGAAATGGTGGCTCTGCTTGGGCCGTCGGGTTCCGGAAAATCCACCCTTTTACGTCACTTAAGCGGTTTGATTACCGGCGATAAATCTGTCGGTAGCCATATCGAGCTGCTGGGCCGCACAGTCCAGCGCGAAGGCCGCCTGGCCCGCGATATCCGCAAAAGCCGCGCCCATACCGGCTACATATTCCAACAATTCAACCTGGTGAACCGCCTGAGCGTACTGGAGAACGTGCTGATTGGCGCGCTCGGCAGCACGCCGTTCTGGCGCACCTGTTTTAGCTGGTTCACCGGCGAGCAGAAACAGCGCGCGTTACAGGCGCTGACCCGCGTTGGCATGGTGCATTTTGCCCATCAGCGCGTTTCCACCCTCTCCGGCGGCCAGCAGCAACGTGTGGCGATTGCCCGTGCGCTGATGCAGCAGGCGAAAGTGATTCTGGCCGATGAACCCATCGCCTCGCTGGACCCAGAATCAGCGCGCATCGTGATGGACACCCTGCGCGACATCAACCAGAACGACGGCATCACCGTGGTCGTCACGCTGCATCAGGTGGATTACGCCCTGCGCTACTGCGAACGCATCGTCGCCCTGCGCCAGGGGCACGTCTTCTACGACGGCAGCAGCCAACAGTTTGATAACGAACGTTTTGACCATCTCTACCGCAGCATTAACCGCGTCGAAGAGAACGCGAAAGCTGCCTGA", - "dna_sequence_length": 789, - "functions": [ - "phosphonate ABC transporter ATPase" - ], - "id": "CDS_4023", - "location": [ - [ - "NC_000913", - 4325165, - "-", - 789 - ] - ], - "md5": "8806ad2d78f8377ee6907f25c0735c0d", - "parent_gene": "", - "protein_md5": "35deea7053d693469598c74c923297c1", - "protein_translation": "MQTIIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSVGSHIELLGRTVQREGRLARDIRKSRAHTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTGEQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQFDNERFDHLYRSINRVEENAKAA", - "protein_translation_length": 262, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948622" - ], - [ - "gene_synonym", - "NP_418531.1" - ], - [ - "gene_synonym", - "ECK4100" - ], - [ - "gene_synonym", - "b4107" - ], - [ - "gene_synonym", - "phnB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16681" - ], - [ - "gene_synonym", - "EcoGene:EG10712" - ], - [ - "gene_synonym", - "GI:16131933" - ], - [ - "gene_synonym", - "ASAP:ABE-0013447" - ], - [ - "gene_synonym", - "JW4068" - ], - [ - "gene_synonym", - "yjdN" - ] - ], - "dna_sequence": "ATGCCGTTAAGTCCCTACCTCTCTTTTGCCGGTAACTGTTCCGACGCGATTGCCTATTATCAACGTACGTTGGGCGCGGAACTGCTCTATAAAATCAGCTTCGGCGAAATGCCAAAATCAGCGCAGGACAGCGCCGAGAACTGCCCTTCCGGAATGCAATTTCCCGATACCGCCATCGCCCACGCCAATGTGCGCATTGCCGGAAGCGACATCATGATGAGCGATGCCATGCCGTCAGGAAAAGCCAGCTACTCCGGCTTTACGCTGGTGCTCGATTCGCAACAGGTCGAAGAAGGAAAACGCTGGTTTGACAATCTTGCCGCTAACGGAAAAATCGAAATGGCCTGGCAGGAAACTTTCTGGGCGCATGGCTTTGGCAAAGTCACCGATAAATTTGGCGTACCGTGGATGATTAATGTCGTCAAACAACAACCAACGCAATAA", - "dna_sequence_length": 444, - "functions": [ - "metalloprotein superfamily protein" - ], - "id": "CDS_4024", - "location": [ - [ - "NC_000913", - 4325741, - "-", - 444 - ] - ], - "md5": "ec53e2a8fe9d2efed747adebbb082817", - "parent_gene": "", - "protein_md5": "7a4ac01db26900e8df8cfd7017aa84f2", - "protein_translation": "MPLSPYLSFAGNCSDAIAYYQRTLGAELLYKISFGEMPKSAQDSAENCPSGMQFPDTAIAHANVRIAGSDIMMSDAMPSGKASYSGFTLVLDSQQVEEGKRWFDNLAANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVKQQPTQ", - "protein_translation_length": 147, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948621" - ], - [ - "gene_synonym", - "yjdM" - ], - [ - "gene_synonym", - "NP_418532.1" - ], - [ - "gene_synonym", - "ECK4101" - ], - [ - "gene_synonym", - "b4108" - ], - [ - "gene_synonym", - "GI:16131934" - ], - [ - "gene_synonym", - "EcoGene:EG10711" - ], - [ - "gene_synonym", - "phnA" - ], - [ - "gene_synonym", - "JW4069" - ], - [ - "gene_synonym", - "ASAP:ABE-0013451" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFJ1" - ] - ], - "dna_sequence": "ATGTCATTACCACACTGCCCAAAATGCAACTCCGAATACACCTACGAAGATAACGGCATGTACATCTGCCCGGAATGTGCCTACGAATGGAACGACGCAGAACCTGCACAGGAAAGCGACGAGCTGATCGTTAAAGATGCTAACGGCAATCTGCTGGCTGACGGCGACAGCGTTACCATCATTAAAGATCTGAAGGTGAAAGGTAGCTCTTCGATGCTGAAAATTGGCACCAAAGTGAAAAACATCCGCCTGGTTGAAGGCGACCATAACATCGATTGCAAAATCGACGGTTTTGGTCCGATGAAACTGAAATCTGAGTTTGTGAAAAAGAACTGA", - "dna_sequence_length": 336, - "functions": [ - "zinc-ribbon family protein" - ], - "id": "CDS_4025", - "location": [ - [ - "NC_000913", - 4326734, - "-", - 336 - ] - ], - "md5": "5e99b928afcbaa224351a17b34e16b45", - "parent_gene": "", - "protein_md5": "871bc0247fd44481964047fde32973d0", - "protein_translation": "MSLPHCPKCNSEYTYEDNGMYICPECAYEWNDAEPAQESDELIVKDANGNLLADGDSVTIIKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN", - "protein_translation_length": 111, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948620" - ], - [ - "gene_synonym", - "crfC" - ], - [ - "gene_synonym", - "ECK4102" - ], - [ - "gene_synonym", - "yjdA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16694" - ], - [ - "gene_synonym", - "GI:16131935" - ], - [ - "gene_synonym", - "b4109" - ], - [ - "gene_synonym", - "JW4070" - ], - [ - "gene_synonym", - "NP_418533.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013456" - ], - [ - "gene_synonym", - "EcoGene:EG11210" - ] - ], - "dna_sequence": "ATGTACACACAGACCCTGTATGAGTTAAGTCAGGAGGCTGAACGCCTGTTACAGCTTTCTCGCCAACAGTTGCAGTTACTGGAAAAAATGCCTCTCTCTGTACCCGGAGACGACGCGCCACAACTGGCTTTACCCTGGAGTCAGCCTAATATCGCCGAACGTCACGCGATGCTGAATAATGAGTTGCGTAAAATTTCCCGACTGGAAATGGTGCTTGCAATTGTCGGTACCATGAAAGCAGGGAAATCAACCACCATTAATGCCATTGTTGGTACGGAGGTTCTGCCTAATCGTAATCGCCCAATGACTGCGCTGCCGACGCTTATTCGCCATACGCCCGGGCAAAAGGAACCGGTACTGCATTTTTCACATGTCGCGCCAATCGATTGTTTAATTCAACAATTACAACAGCGCCTGCGTGATTGCGATATTAAGCATCTGACCGATGTGCTGGAAATAGATAAAGATATGCGTGCGCTTATGCAGCGGATCGAAAATGGCGTCGCTTTCGAAAAATATTATCTGGGTGCCCAGCCTATTTTTCATTGTCTGAAAAGTTTGAATGATTTAGTGCGACTGGCGAAGGCGCTGGACGTCGATTTTCCTTTTTCTGCTTACGCCGCCATTGAGCATATTCCCGTGATTGAAGTGGAGTTTGTCCATCTAGCGGGGCTGGAGAGTTATCCCGGTCAGTTGACGTTACTGGATACCCCCGGGCCAAATGAAGCCGGGCAACCGCATCTGCAAAAAATGCTTAACCAGCAGCTGGCACGCGCCTCGGCGGTACTGGCGGTGCTGGATTATACGCAACTGAAATCGATCTCCGATGAAGAGGTCCGTGAGGCGATTTTGGCGGTGGGGCAATCGGTGCCGCTGTACGTGCTGGTCAATAAGTTCGATCAACAGGATCGTAACAGTGACGACGCCGACCAGGTGCGGGCACTGATTTCCGGGACGCTGATGAAAGGCTGTATTACGCCACAGCAGATATTTCCGGTGTCGTCGATGTGGGGCTACCTGGCGAATCGGGCGCGCTATGAGTTAGCCAACAACGGTAAGTTACCACCGCCAGAGCAACAACGCTGGGTGGAAGATTTTGCCCATGCCGCGCTTGGCAGGCGCTGGCGTCATGCCGATCTGGCGGACCTCGAACATATTCGTCATGCTGCCGATCAGTTGTGGGAAGATTCGCTGTTCGCCCAGCCAATTCAGGCGTTGCTTCATGCCGCTTACGCTAACGCCTCGTTGTATGCTCTGCGATCTGCCGCGCATAAACTGTTGAATTACGCGCAGCAGGCGCGGGAATACCTGGATTTTCGTGCGCACGGGTTAAACGTCGCTTGTGAACAATTGCGGCAAAATATCCACCAGATCGAAGAAAGTTTGCAGCTATTGCAACTCAATCAGGCGCAGGTGAGCGGCGAGATTAAACATGAAATCGAGCTGGCCCTGACCTCCGCCAACCACTTTCTGCGTCAACAGCAAGATGCGCTGAAGGTGCAGTTAGCCGCCTTGTTTCAGGATGATTCGGAGCCGTTAAGCGAGATTCGTACCCGCTGTGAGACACTGTTACAGACGGCGCAGAACACCATCAGTCGCGACTTTACGCTGCGTTTTGCCGAGCTTGAATCCACCCTTTGCCGGGTGTTAACCGATGTTATTCGCCCCATTGAGCAACAAGTCAAAATGGAATTGAGCGAGTCAGGGTTTCGTCCTGGGTTTCATTTTCCTGTTTTTCACGGCGTAGTTCCCCACTTCAACACTCGCCAGCTGTTCAGTGAAGTCATTTCGCGCCAGGAAGCAACGGACGAGCAGAGCACGCGTTTAGGCGTTGTGCGTGAGACTTTTTCGCGCTGGTTGAATCAGCCCGACTGGGGACGGGGAAATGAGAAATCACCGACAGAAACGGTTGATTACAGTGTGTTGCAACGAGCATTAAGCGCAGAAGTCGATCTCTATTGCCAACAAATGGCTAAAGTTCTGGCAGAGCAGGTCGATGAATCTGTTACGGCAGGCATGAATACTTTTTTCGCTGAGTTCGCTTCATGTTTGACGGAATTACAGACGCGTTTACGCGAAAGTCTGGCTCTGCGTCAACAAAATGAATCGGTGGTCAGGCTGATGCAGCAGCAATTGCAGCAGACTGTGATGACTCACGGCTGGATTTACACCGACGCCCAGCTGTTACGCGATGATATTCAAACACTTTTCACGGCAGAACGATATTGA", 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"MYTQTLYELSQEAERLLQLSRQQLQLLEKMPLSVPGDDAPQLALPWSQPNIAERHAMLNNELRKISRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPMTALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIKHLTDVLEIDKDMRALMQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVEFVHLAGLESYPGQLTLLDTPGPNEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISDEEVREAILAVGQSVPLYVLVNKFDQQDRNSDDADQVRALISGTLMKGCITPQQIFPVSSMWGYLANRARYELANNGKLPPPEQQRWVEDFAHAALGRRWRHADLADLEHIRHAADQLWEDSLFAQPIQALLHAAYANASLYALRSAAHKLLNYAQQAREYLDFRAHGLNVACEQLRQNIHQIEESLQLLQLNQAQVSGEIKHEIELALTSANHFLRQQQDALKVQLAALFQDDSEPLSEIRTRCETLLQTAQNTISRDFTLRFAELESTLCRVLTDVIRPIEQQVKMELSESGFRPGFHFPVFHGVVPHFNTRQLFSEVISRQEATDEQSTRLGVVRETFSRWLNQPDWGRGNEKSPTETVDYSVLQRALSAEVDLYCQQMAKVLAEQVDESVTAGMNTFFAEFASCLTELQTRLRESLALRQQNESVVRLMQQQLQQTVMTHGWIYTDAQLLRDDIQTLFTAERY", - "protein_translation_length": 742, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12460" - ], - [ - "gene_synonym", - "NP_418534.4" - ], - [ - "gene_synonym", - "GeneID:948633" - ], - [ - "gene_synonym", - "GI:90111687" - ], - [ - "gene_synonym", - "ECK4103" - ], - [ - "gene_synonym", - "JW5729" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39267" - ], - [ - "gene_synonym", - "ASAP:ABE-0013459" - ], - [ - "gene_synonym", - "b4110" - ], - [ - "gene_synonym", - "yjcZ" - ] - ], - "dna_sequence": "TTGACCAAGACGTTACTTGACGGCCCCGGTCGCGTGCTGGAGTCGGTTTATCCCCGCTTTTTAGTGGATCTGGCGCAGGGTGATGATGCCCGCCTTCCACAAGCCCATCAGCAGCAGTTTCGTGAACGACTGATGCAGGAACTTCTTTCGCGTGTGCAGCTTCAGACATGGACGAACGGCGGCATGTTAAATGCGCCGCTTAGCCTGCGTCTGACATTGGTGGAAAAACTGGCGTCGATGCTGGATCCCGGTCATCTGGCACTGACGCAGATCGCGCAGCATCTGGCGCTGCTGCAAAAAATGGATCACCGCCAGCACTCTGCTTTCCCGGAGCTCCCCCAGCAAATTGCCGCCTTGTATGAGTGGTTTTCAGCCCGTTGTCGCTGGAAGGAAAAGGCGTTAACGCAACGAGGCCTACTGGTGCAGGCAGGTGATCAGAGCGAGCAAATTTTTACCCGCTGGCGTGCTGGGGCGTATAACGCCTGGTCGTTGCCTGGGCGCTGTTTTATCGTTCTGGAGGAGTTGCGCTGGGGGGCATTTGGCGATGCCTGCCGTCTGGGAAGCCCGCAAGCGGTGGCGTTGTTGCTGGGTGATTTGCTCGAGAAAGCGACACAACATCTGGCAGAGAGTATCAATGCGGCACCGACCACGCGTCACTATTACCATCAGTGGTTTGCCTCTTCGACCGTTCCGACGGGCGGGGAGCATGCTGATTTTTTAAGTTGGCTGGGAAAGTGGACCACGGCAGATAAACAACCCGTTTGCTGGTCAGTGACCCAACGCTGGCAAACTGTCGCGCTGGGGATGCCACGACTCTGTTCAGCGCAGCGTCTGGCGGGGGCAATGCTCGAGGAAATCTTCTCTGTAAATTTGGCGTAA", - "dna_sequence_length": 879, - "functions": [ - "YjcZ family protein", - "yhjH motility defect suppressor" - ], - "id": "CDS_4027", - "location": [ - [ - "NC_000913", - 4329360, - "+", - 879 - ] - ], - "md5": "df62e5f730ba57aaa4a9988e8eaaa96e", - "parent_gene": "", - "protein_md5": "40973759035e491a7aa0e783444dbf64", - "protein_translation": "MTKTLLDGPGRVLESVYPRFLVDLAQGDDARLPQAHQQQFRERLMQELLSRVQLQTWTNGGMLNAPLSLRLTLVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIAALYEWFSARCRWKEKALTQRGLLVQAGDQSEQIFTRWRAGAYNAWSLPGRCFIVLEELRWGAFGDACRLGSPQAVALLLGDLLEKATQHLAESINAAPTTRHYYHQWFASSTVPTGGEHADFLSWLGKWTTADKQPVCWSVTQRWQTVALGMPRLCSAQRLAGAMLEEIFSVNLA", - "protein_translation_length": 292, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013462" - ], - [ - "gene_synonym", - "NP_418535.1" - ], - [ - "gene_synonym", - "GeneID:948626" - ], - [ - "gene_synonym", - "ECK4104" - ], - [ - "gene_synonym", - "proP" - ], - [ - "gene_synonym", - "GI:16131937" - ], - [ - "gene_synonym", - "EcoGene:EG11612" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0C0L7" - ], - [ - "gene_synonym", - "JW4072" - ], - [ - "gene_synonym", - "b4111" - ] - ], - "dna_sequence": "ATGCTGAAAAGGAAAAAAGTAAAACCGATTACCCTTCGTGATGTCACCATTATTGATGACGGTAAACTGCGTAAAGCCATTACCGCAGCATCACTGGGTAATGCAATGGAATGGTTCGATTTTGGTGTTTATGGTTTTGTTGCTTACGCATTAGGTAAAGTTTTTTTCCCGGGGGCTGACCCCAGCGTGCAGATGGTTGCTGCACTTGCCACTTTCTCCGTTCCCTTTCTGATTCGACCGCTTGGCGGACTCTTCTTTGGTATGTTGGGCGATAAATATGGTCGCCAGAAGATCCTCGCTATCACTATTGTGATTATGTCGATCAGTACGTTCTGTATTGGCTTAATACCGTCCTACGACACGATTGGTATTTGGGCACCGATTCTGCTGTTGATCTGTAAGATGGCACAAGGTTTCTCGGTCGGCGGTGAATATACCGGGGCGTCGATATTTGTTGCGGAATACTCCCCTGACCGTAAACGTGGCTTTATGGGCAGCTGGCTGGACTTCGGTTCTATTGCCGGGTTTGTGCTGGGTGCGGGCGTGGTGGTGTTAATTTCGACCATTGTCGGCGAAGCGAACTTCCTCGATTGGGGCTGGCGTATTCCGTTCTTTATCGCTCTGCCGTTAGGGATTATCGGGCTTTACCTGCGCCATGCGCTGGAAGAGACTCCGGCGTTCCAGCAGCATGTCGATAAACTGGAACAGGGCGACCGTGAAGGTTTGCAGGATGGCCCGAAAGTCTCGTTTAAAGAGATTGCCACTAAATACTGGCGCAGCCTGTTGACATGTATTGGTCTGGTAATTGCCACCAACGTGACTTACTACATGTTGCTGACCTATATGCCGAGTTATTTGTCGCATAACCTGCATTACTCCGAAGACCACGGGGTGCTGATTATTATCGCCATTATGATCGGTATGCTGTTTGTCCAGCCGGTGATGGGCTTGCTGAGTGACCGTTTTGGCCGTCGTCCGTTTGTGCTACTTGGTAGTGTTGCCCTGTTTGTGTTGGCGATCCCGGCGTTTATTCTGATTAACAGTAACGTCATCGGCCTGATTTTTGCCGGGTTACTGATGCTGGCGGTGATCCTTAACTGCTTTACGGGCGTTATGGCTTCTACCTTGCCAGCGATGTTCCCGACGCATATCCGTTACAGCGCGCTGGCGGCGGCATTTAATATTTCGGTGCTGGTTGCCGGTCTGACGCCAACGCTGGCGGCCTGGCTGGTCGAAAGCTCGCAGAATCTGATGATGCCTGCCTATTACCTGATGGTAGTGGCGGTGGTTGGTTTAATCACCGGCGTAACCATGAAAGAGACGGCAAATCGTCCGTTGAAAGGTGCGACACCGGCGGCGTCAGATATACAGGAAGCGAAGGAAATTCTCGTCGAGCATTACGATAATATCGAGCAGAAAATCGATGATATTGACCACGAGATTGCCGATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAA", - "dna_sequence_length": 1503, - "functions": [ - "proline/glycine betaine transporter" - ], - "id": "CDS_4028", - "location": [ - [ - "NC_000913", - 4330502, - "+", - 1503 - ] - ], - "md5": "e2cb91e8c042b1d3353b8ed4344365c5", - "parent_gene": "", - "protein_md5": "5a9e22725a4e1db2084741b8bfe7124b", - "protein_translation": "MLKRKKVKPITLRDVTIIDDGKLRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYDTIGIWAPILLLICKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKYWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVLLGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESSQNLMMPAYYLMVVAVVGLITGVTMKETANRPLKGATPAASDIQEAKEILVEHYDNIEQKIDDIDHEIADLQAKRTRLVQQHPRIDE", - "protein_translation_length": 500, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_004831120.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:G3MTW7" - ], - [ - "gene_synonym", - "EcoGene:EG14499" - ], - [ - "gene_synonym", - "b4703" - ], - [ - "gene_synonym", - "GI:345452724" - ], - [ - "gene_synonym", - "ECK4515" - ], - [ - "gene_synonym", - "GeneID:11115379" - ], - [ - "gene_synonym", - "pmrR" - ] - ], - "dna_sequence": "ATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGA", - "dna_sequence_length": 90, - "functions": [ - "putative membrane-bound BasS regulator" - ], - "id": "CDS_4029", - "location": [ - [ - "NC_000913", - 4332116, - "+", - 90 - ] - ], - "md5": "e4486611a98bdbcf95fa61692e9a4166", - "parent_gene": "", - "protein_md5": "609abafe5334aa00f725dff12740eb57", - "protein_translation": "MKNRVYESLTTVFSVLVVSSFLYIWFATY", - "protein_translation_length": 29, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948632" - ], - [ - "gene_synonym", - "basS" - ], - [ - "gene_synonym", - "ASAP:ABE-0013464" - ], - [ - "gene_synonym", - "ECK4105" - ], - [ - "gene_synonym", - "pmrB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30844" - ], - [ - "gene_synonym", - "EcoGene:EG11614" - ], - [ - "gene_synonym", - "JW4073" - ], - [ - "gene_synonym", - "NP_418536.1" - ], - [ - "gene_synonym", - "b4112" - ], - [ - "gene_synonym", - "GI:16131938" - ] - ], - "dna_sequence": "ATGCATTTTCTGCGCCGACCAATATCGCTGCGCCAACGGCTGATATTGACCATCGGGGCCATTTTGTTGGTGTTTGAGCTGATCAGCGTCTTCTGGCTATGGCATGAAAGTACCGAGCAGATTCAGCTGTTTGAGCAGGCGCTACGCGACAATCGCAACAACGATCGCCACATCATGCGTGAGATCCGCGAGGCGGTCGCCAGCCTGATTGTCCCCGGCGTCTTTATGGTCAGCCTGACGCTATTTATCTGCTATCAGGCGGTACGCCGCATCACCCGCCCGCTGGCGGAGCTGCAAAAAGAGCTGGAAGCGCGCACCGCCGACAACTTAACGCCCATTGCCATTCACAGCGCCACCCTCGAAATCGAAGCGGTGGTTTCGGCGTTAAACGATCTGGTCAGTCGCCTGACCAGCACGCTGGATAACGAAAGGTTGTTTACCGCTGACGTCGCGCACGAACTGCGAACGCCACTGGCGGGGGTGCGTTTGCATCTGGAACTGCTGGCGAAAACGCATCACATTGATGTAGCACCGTTAGTGGCACGGCTTGATCAGATGATGGAGAGCGTCTCCCAGCTGCTGCAACTGGCGCGTGCCGGACAGTCATTTTCTTCCGGTAATTATCAACATGTAAAACTGCTGGAAGATGTCATTCTCCCCTCGTATGACGAACTCAGTACCATGCTCGACCAGCGACAGCAAACCCTGCTATTGCCAGAGAGCGCCGCCGACATCACCGTTCAGGGTGATGCAACCCTGCTGCGGATGTTATTGCGAAACCTGGTAGAAAACGCCCATCGTTACAGCCCGCAAGGCAGCAACATTATGATTAAGCTGCAAGAAGATGACGGAGCGGTCATGGCAGTTGAAGATGAAGGACCAGGTATTGATGAGAGTAAATGCGGGGAGTTGAGTAAAGCGTTTGTACGTATGGACAGCCGTTATGGCGGGATTGGTCTGGGGTTAAGTATTGTCAGCCGCATTACACAGTTGCATCACGGGCAGTTTTTCCTGCAAAACCGGCAAGAGACTTCCGGCACGCGGGCCTGGGTACGGCTGAAGAAAGATCAGTACGTGGCAAACCAGATATAA", 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"gene_synonym", - "pmrA" - ], - [ - "gene_synonym", - "ECK4106" - ], - [ - "gene_synonym", - "JW4074" - ], - [ - "gene_synonym", - "NP_418537.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013466" - ], - [ - "gene_synonym", - "b4113" - ], - [ - "gene_synonym", - "GI:16131939" - ] - ], - "dna_sequence": "ATGAAAATTCTGATTGTTGAAGACGATACGCTGTTATTGCAGGGACTGATTCTGGCGGCGCAAACCGAAGGCTACGCGTGCGATAGCGTGACAACCGCGCGGATGGCGGAACAAAGCCTTGAGGCAGGTCATTACAGCCTGGTGGTACTGGATTTAGGGTTACCCGACGAAGATGGACTGCATTTTCTCGCCCGTATCCGGCAGAAAAAATATACCCTGCCGGTACTGATCCTCACCGCTCGCGATACGCTGACCGACAAAATCGCCGGGCTGGATGTCGGTGCCGACGACTATCTGGTGAAGCCTTTTGCGCTGGAAGAGTTACATGCCCGTATCCGCGCCCTGCTACGACGCCATAATAATCAGGGCGAAAGTGAGCTGATTGTTGGCAATCTGACGCTGAACATGGGTCGCCGTCAGGTATGGATGGGCGGTGAAGAGTTGATTCTGACGCCCAAAGAATATGCTCTGCTGTCACGGTTAATGCTCAAAGCAGGCAGTCCGGTGCATCGGGAAATTCTCTACAACGACATCTATAACTGGGACAATGAACCCTCGACCAACACCCTGGAAGTGCATATCCACAATCTGCGCGACAAAGTGGGCAAAGCCCGTATCCGCACCGTGCGCGGCTTTGGCTATATGCTGGTCGCGAATGAGGAAAACTAA", - "dna_sequence_length": 669, - "functions": [ - "response regulator in two-component regulatory system with BasS" - ], - "id": "CDS_4031", - "location": [ - [ - "NC_000913", - 4333950, - "-", - 669 - ] - ], - "md5": "6bc7a4351677febb4b6a7daabdea0651", - "parent_gene": "", - "protein_md5": "9441bd7ea55e37757b26c3f6a77f073c", - "protein_translation": "MKILIVEDDTLLLQGLILAAQTEGYACDSVTTARMAEQSLEAGHYSLVVLDLGLPDEDGLHFLARIRQKKYTLPVLILTARDTLTDKIAGLDVGADDYLVKPFALEELHARIRALLRRHNNQGESELIVGNLTLNMGRRQVWMGGEELILTPKEYALLSRLMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKARIRTVRGFGYMLVANEEN", - "protein_translation_length": 222, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11613" - ], - [ - "gene_synonym", - "pmrC" - ], - [ - "gene_synonym", - "GI:90111688" - ], - [ - "gene_synonym", - "ECK4107" - ], - [ - "gene_synonym", - "ASAP:ABE-0013469" - ], - [ - "gene_synonym", - "b4114" - ], - [ - "gene_synonym", - "yjdB" - ], - [ - "gene_synonym", - "NP_418538.2" - ], - [ - "gene_synonym", - "GeneID:948629" - ], - [ - "gene_synonym", - "JW5730" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30845" - ], - [ - "gene_synonym", - "pagB" - ], - [ - "gene_synonym", - "eptA" - ] - ], - "dna_sequence": "ATGTTGAAGCGCCTACTAAAAAGACCCTCTTTGAATTTACTCGCCTGGCTATTGTTGGCCGCTTTTTATATCTCTATCTGCCTGAATATTGCCTTTTTTAAACAGGTGTTGCAGGCGCTGCCGCTGGATTCGCTGCATAACGTACTGGTTTTCTTGTCGATGCCGGTCGTCGCTTTCAGCGTGATTAATATTGTCCTGACACTAAGCTCTTTCTTATGGCTTAATCGACCACTGGCCTGCCTGTTTATTCTGGTTGGCGCGGCTGCACAATATTTCATAATGACTTACGGCATCGTCATCGACCGCTCGATGATTGCCAATATTATTGATACCACTCCGGCAGAAAGTTATGCGCTGATGACACCGCAAATGTTATTAACGCTGGGATTCAGCGGCGTGCTTGCTGCGCTGATTGCCTGCTGGATAAAAATCAAACCTGCCACCTCGCGTCTGCGCAGTGTTCTTTTCCGTGGAGCCAATATTCTGGTTTCTGTACTACTGATTTTGCTGGTCGCCGCACTGTTTTATAAAGACTACGCCTCGTTGTTCCGCAATAACAAAGAGCTGGTGAAATCCTTAAGCCCCTCTAACAGCATTGTTGCCAGCTGGTCATGGTACTCCCATCAGCGACTGGCAAATCTGCCGCTGGTGCGAATTGGTGAAGACGCGCACCGCAACCCGTTAATGCAGAACGAAAAACGTAAAAATTTGACCATCCTGATTGTCGGCGAAACCTCGCGGGCGGAGAACTTCTCCCTCAACGGCTACCCGCGTGAAACTAACCCGCGGCTGGCGAAAGATAACGTGGTCTATTTCCCTAATACCGCATCTTGCGGCACGGCAACGGCAGTTTCAGTACCGTGCATGTTCTCGGATATGCCGCGTGAGCACTACAAAGAAGAGCTGGCACAGCACCAGGAAGGCGTGCTGGATATCATTCAGCGAGCGGGCATCAACGTGCTGTGGAATGACAACGATGGCGGCTGTAAAGGTGCCTGCGACCGCGTGCCTCACCAGAACGTCACCGCGCTGAATCTACCTGATCAGTGCATCAACGGCGAATGCTATGACGAAGTGCTGTTCCACGGGCTTGAAGAGTACATCAATAACCTGCAAGGTGATGGCGTGATTGTCTTACACACCATCGGCAGCCACGGTCCGACCTATTACAACCGCTATCCGCCTCAGTTCAGGAAATTTACCCCAACCTGCGACACCAATGAGATCCAGACCTGTACCAAAGAGCAACTGGTGAACACTTACGACAACACGCTGGTTTACGTCGACTATATTGTTGATAAAGCGATTAATCTGCTGAAAGAACATCAGGATAAATTTACCACCAGCCTGGTTTATCTTTCTGACCACGGTGAATCGTTAGGTGAAAATGGCATCTATCTGCACGGTCTGCCTTATGCCATCGCCCCGGATAGCCAAAAACAGGTGCCGATGCTGCTGTGGCTGTCGGAGGATTATCAAAAACGGTATCAGGTTGACCAGAACTGCCTGCAAAAACAGGCGCAAACGCAACACTATTCACAAGACAATTTATTCTCCACGCTATTGGGATTAACTGGCGTTGAGACGAAGTATTACCAGGCTGCGGATGATATTCTGCAAACTTGCAGGAGAGTGAGTGAATGA", 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- ], - [ - "gene_synonym", - "ECK4108" - ], - [ - "gene_synonym", - "ASAP:ABE-0013473" - ], - [ - "gene_synonym", - "GeneID:948628" - ], - [ - "gene_synonym", - "GI:16131941" - ], - [ - "gene_synonym", - "aniC" - ], - [ - "gene_synonym", - "JW4076" - ], - [ - "gene_synonym", - "adiC" - ], - [ - "gene_synonym", - "yjdE" - ], - [ - "gene_synonym", - "yjdD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P60061" - ], - [ - "gene_synonym", - "b4115" - ], - [ - "gene_synonym", - "NP_418539.1" - ] - ], - "dna_sequence": "ATGTCTTCGGATGCTGATGCTCACAAAGTGGGCTTAATCCCCGTCACCCTGATGGTGTCGGGGAATATTATGGGGTCAGGTGTTTTTCTGTTACCTGCAAACCTGGCCTCTACTGGCGGGATTGCCATTTATGGATGGTTGGTGACGATTATCGGTGCACTGGGGCTCTCGATGGTATACGCCAAAATGTCGTTCCTCGACCCAAGTCCTGGTGGTTCTTACGCTTACGCCCGCCGCTGCTTTGGCCCGTTTCTCGGTTATCAAACCAACGTCCTCTACTGGCTGGCCTGCTGGATCGGCAATATCGCCATGGTGGTCATTGGCGTAGGATATTTAAGTTACTTCTTCCCGATTCTGAAAGATCCATTGGTATTAACCATCACCTGCGTCGTGGTGCTGTGGATCTTCGTCCTGCTGAACATTGTCGGTCCGAAAATGATCACCCGTGTGCAGGCAGTTGCCACCGTGCTGGCGCTGATCCCCATCGTCGGGATTGCCGTATTTGGCTGGTTCTGGTTCCGTGGTGAAACCTATATGGCGGCATGGAACGTCAGCGGCCTGGGCACCTTCGGTGCAATTCAAAGTACCCTTAACGTTACGCTGTGGTCGTTCATCGGTGTGGAAAGTGCCTCCGTTGCCGCAGGTGTGGTGAAAAACCCGAAACGCAATGTCCCTATCGCCACCATTGGTGGGGTATTGATTGCCGCCGTTTGCTATGTACTTTCTACCACCGCGATTATGGGGATGATCCCTAATGCCGCACTGCGCGTTTCTGCTTCGCCATTCGGTGATGCCGCACGGATGGCGTTGGGTGACACCGCCGGGGCCATTGTTTCCTTCTGCGCAGCTGCGGGTTGCTTAGGTTCACTGGGCGGCTGGACGTTGCTGGCGGGTCAAACGGCGAAAGCCGCTGCCGATGACGGACTGTTCCCACCGATTTTTGCCCGTGTAAATAAAGCGGGTACGCCAGTGGCGGGGCTGATTATCGTCGGTATTTTGATGACCATCTTCCAGCTCAGCAGCATTTCACCAAACGCGACCAAAGAGTTCGGTCTGGTTTCTTCCGTCTCGGTCATCTTTACACTGGTGCCATATCTTTACACCTGTGCGGCGTTACTGCTGCTCGGACACGGTCACTTTGGTAAAGCACGCCCGGCATATCTGGCAGTTACTACCATTGCCTTCCTCTACTGCATCTGGGCCGTGGTGGGGTCCGGAGCGAAAGAGGTTATGTGGTCATTTGTCACCCTGATGGTCATCACCGCCATGTATGCGCTGAATTACAACCGGCTACATAAAAACCCGTATCCCTTAGATGCACCAATAAGCAAAGATTAA", - "dna_sequence_length": 1338, - "functions": [ - "arginine:agmatine antiporter" - ], - "id": "CDS_4033", - "location": [ - [ - "NC_000913", - 4337031, - "-", - 1338 - ] - ], - "md5": "eb2e1f929aece525ec5d2fc099d71794", - "parent_gene": "", - "protein_md5": "6da51f605a6d8b0aed027998b72f6c2f", - "protein_translation": "MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDAPISKD", - "protein_translation_length": 445, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11966" - ], - [ - "gene_synonym", - "ECK4109" - ], - [ - "gene_synonym", - "NP_418540.1" - ], - [ - "gene_synonym", - "adiY" - ], - [ - "gene_synonym", - "GeneID:948627" - ], - [ - "gene_synonym", - "ASAP:ABE-0013479" - ], - [ - "gene_synonym", - "GI:16131942" - ], - [ - "gene_synonym", - "JW4077" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33234" - ], - [ - "gene_synonym", - "b4116" - ] - ], - "dna_sequence": "ATGAGGATTTGCAGCGACCAACCTTGTATTGTTTTATTGACTGAAAAAGATGTCTGGATAAGGGTGAATGGGAAAGAACCTATTAGCCTTAAAGCTAACCATATGGCGTTATTAAATTGTGAAAATAATATTATCGACGTCTCCTCTCTTAACAACACTTTGGTTGCTCATATTAGTCACGACATCATCAAAGATTACCTCCGGTTTCTGAATAAAGATCTCTCGCAAATACCAGTATGGCAACGTAGCGCTACGCCCATACTCACCCTGCCATGCCTGACGCCAGACGTCTTTCGCGTTGCCGCGCAACACAGCATGATGCCCGCAGAAACTGAGTCAGAAAAGGAACGAACACGCGCATTATTATTCACGGTGCTATCCCGTTTTCTCGACAGTAAAAAATTCGTTTCATTAATGATGTATATGTTACGTAATTGTGTAAGTGACAGCGTTTATCAAATTATTGAAAGCGATATTCACAAAGACTGGAATCTTAGTATGGTAGCCAGTTGTTTATGTCTTAGCCCAAGTCTGTTAAAGAAAAAGTTGAAAAGCGAAAACACCAGTTATAGCCAAATAATCACCACCTGCCGCATGCGTTATGCCGTAAATGAATTAATGATGGACGGTAAAAATATCTCTCAGGTATCACAGTCCTGCGGCTACAACAGTACGTCGTACTTTATTTCTGTCTTTAAAGACTTCTACGGTATGACGCCGCTGCATTATGTTAGTCAGCACAGAGAACGCACTGTCGCCTGA", - "dna_sequence_length": 762, - "functions": [ - "adi system transcriptional activator" - ], - "id": "CDS_4034", - "location": [ - [ - "NC_000913", - 4337929, - "-", - 762 - ] - ], - "md5": "4cb7f154644ecb5df08fa54fffbbec28", - "parent_gene": "", - "protein_md5": "f52ef634ecd02f6a92ea8959834dcae0", - "protein_translation": "MRICSDQPCIVLLTEKDVWIRVNGKEPISLKANHMALLNCENNIIDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPVWQRSATPILTLPCLTPDVFRVAAQHSMMPAETESEKERTRALLFTVLSRFLDSKKFVSLMMYMLRNCVSDSVYQIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYAVNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTPLHYVSQHRERTVA", - "protein_translation_length": 253, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:221800782" - ], - [ - "gene_synonym", - "ECK4110" - ], - [ - "gene_synonym", - "ASAP:ABE-0013483" - ], - [ - "gene_synonym", - "GeneID:948638" - ], - [ - "gene_synonym", - "EcoGene:EG11501" - ], - [ - "gene_synonym", - "adiA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28629" - ], - [ - "gene_synonym", - "NP_418541.2" - ], - [ - "gene_synonym", - "JW5731" - ], - [ - "gene_synonym", - "b4117" - ], - [ - "gene_synonym", - "adi" - ] - ], - "dna_sequence": "ATGAAAGTATTAATTGTTGAAAGCGAGTTTCTCCATCAAGACACCTGGGTCGGTAACGCCGTTGAGCGTCTGGCAGATGCTTTAAGCCAGCAAAATGTTACCGTGATTAAATCCACCTCCTTTGATGATGGTTTTGCCATTCTCTCTTCAAACGAAGCCATTGACTGCCTGATGTTCAGCTATCAAATGGAACATCCGGACGAACATCAAAACGTCAGACAATTGATCGGTAAGCTTCATGAGCGCCAACAAAACGTGCCGGTCTTCCTGTTGGGCGATCGGGAAAAAGCCCTCGCCGCAATGGATCGCGACCTGCTGGAGCTTGTCGATGAATTCGCCTGGATTCTGGAAGATACCGCCGACTTTATCGCCGGACGCGCCGTTGCCGCGATGACCCGCTACCGCCAGCAGCTGTTGCCGCCACTGTTCAGCGCGCTGATGAAATATAGTGACATCCATGAATATTCCTGGGCAGCGCCAGGCCACCAGGGCGGCGTTGGTTTTACCAAAACACCCGCCGGACGTTTCTACCATGACTACTATGGTGAAAATCTGTTCCGCACCGACATGGGCATCGAACGAACTTCCCTCGGTTCTTTGCTTGACCATACTGGCGCATTTGGCGAAAGCGAAAAATATGCCGCACGCGTATTTGGTGCCGATCGCTCCTGGTCGGTAGTCGTCGGTACTTCCGGCTCTAACCGCACCATCATGCAGGCTTGCATGACCGATAACGATGTCGTGGTCGTTGACCGTAACTGCCATAAATCCATCGAACAAGGTTTGATGCTGACAGGCGCGAAACCGGTCTATATGGTGCCAAGCCGCAACCGCTACGGCATTATCGGGCCAATCTATCCGCAGGAAATGCAACCTGAAACCTTGCAGAAGAAAATCAGTGAAAGCCCGCTGACCAAAGACAAAGCCGGGCAAAAACCGTCTTACTGCGTGGTGACCAACTGCACCTATGACGGCGTGTGTTATAACGCTAAAGAAGCGCAGGATCTGCTGGAAAAAACCTCCGATCGTCTGCACTTTGACGAAGCCTGGTACGGCTATGCACGTTTCAACCCGATCTATGCCGATCACTATGCCATGCGCGGCGAACCTGGCGATCACAACGGTCCTACCGTTTTCGCCACCCACTCCACCCACAAACTGCTGAATGCGCTGTCACAGGCTTCTTATATTCATGTACGTGAAGGTCGTGGGGCGATTAACTTCTCCCGCTTCAACCAGGCCTACATGATGCATGCCACCACCTCCCCGCTGTATGCCATCTGCGCATCCAACGACGTGGCGGTGTCGATGATGGACGGCAACAGCGGCCTGTCACTGACACAGGAAGTGATTGACGAAGCGGTTGATTTCCGTCAGGCGATGGCGCGGCTATATAAAGAGTTCACCGCTGACGGTAGCTGGTTCTTCAAACCGTGGAACAAAGAAGTCGTCACCGACCCACAAACCGGCAAAACCTATGACTTTGCTGACGCACCAACCAAACTGCTGACCACCGTTCAGGACTGCTGGGTAATGCATCCGGGCGAAAGCTGGCACGGCTTCAAAGATATTCCGGATAACTGGAGTATGCTCGACCCGATTAAAGTCAGCATCCTTGCTCCGGGAATGGGTGAAGATGGTGAACTGGAAGAAACCGGTGTTCCGGCGGCGCTGGTCACTGCCTGGCTTGGTCGCCACGGCATTGTACCTACCCGCACCACTGACTTCCAAATTATGTTCCTGTTCTCTATGGGCGTAACCCGTGGGAAATGGGGAACTCTGGTTAACACCCTTTGCTCCTTCAAACGCCACTATGACGCCAACACACCGCTGGCGCAGGTGATGCCGGAACTTGTTGAACAATATCCTGACACTTACGCGAACATGGGGATTCACGATCTGGGTGACACCATGTTTGCCTGGCTGAAAGAAAACAACCCTGGCGCACGGTTGAACGAAGCCTATTCCGGCCTGCCGGTGGCGGAAGTCACCCCGCGTGAAGCGTACAACGCGATTGTCGACAACAATGTCGAACTGGTATCCATTGAAAATCTGCCAGGACGCATCGCGGCAAACTCAGTTATCCCGTATCCGCCAGGAATCCCGATGCTGCTGTCTGGTGAAAACTTCGGCGATAAAAACAGTCCGCAAGTAAGTTATTTACGCTCGCTGCAATCCTGGGACCACCATTTCCCTGGATTTGAACACGAAACTGAAGGGACTGAAATTATTGACGGTATTTACCACGTTATGTGCGTGAAAGCGTAA", 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"MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMFSYQMEHPDEHQNVRQLIGKLHERQQNVPVFLLGDREKALAAMDRDLLELVDEFAWILEDTADFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAPGHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPDTYANMGIHDLGDTMFAWLKENNPGARLNEAYSGLPVAEVTPREAYNAIVDNNVELVSIENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSYLRSLQSWDHHFPGFEHETEGTEIIDGIYHVMCVKA", - "protein_translation_length": 755, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948637" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACH8" - ], - [ - "gene_synonym", - "NP_418542.1" - ], - [ - "gene_synonym", - "EcoGene:EG11230" - ], - [ - "gene_synonym", - "melR" - ], - [ - "gene_synonym", - "ECK4111" - ], - [ - "gene_synonym", - "ASAP:ABE-0013486" - ], - [ - "gene_synonym", - "b4118" - ], - [ - "gene_synonym", - "GI:16131944" - ], - [ - "gene_synonym", - "JW4079" - ] - ], - "dna_sequence": "ATGAATACAGATACGTTTATGTGCAGCAGCGACGAAAAACAGACCCGCAGCCCGCTGTCGCTGTATTCGGAATACCAGCGGATGGAGATTGAGTTTCGCGCACCGCATATCATGCCCACCAGCCACTGGCATGGTCAGGTCGAAGTGAATGTGCCTTTCGATGGCGATGTGGAATACCTGATCAACAATGAAAAAGTGAATATCAATCAGGGTCATATCACGCTGTTCTGGGCCTGTACACCGCACCAACTAACAGATACCGGAACCTGTCAGAGCATGGCGATTTTTAATCTGCCGATGCATCTGTTTCTCTCCTGGCCGCTGGATAAAGACCTGATTAACCACGTCACTCACGGCATGGTGATCAAATCACTGGCCACACAGCAACTTAGCCCGTTTGAAGTGCGCCGCTGGCAGCAGGAATTAAACAGTCCGAACGAGCAAATTCGCCAGCTCGCCATTGATGAAATTGGCCTGATGCTCAAGCGATTTAGCCTCTCTGGCTGGGAACCGATTCTGGTCAATAAAACCTCGCGCACACACAAAAACAGCGTCTCGCGCCATGCGCAATTTTATGTTAGCCAGATGCTGGGCTTTATTGCCGAAAACTATGATCAGGCGCTGACCATCAACGATGTGGCTGAGCACGTCAAACTTAACGCCAACTATGCAATGGGGATATTCCAGCGGGTCATGCAATTGACGATGAAACAGTACATTACCGCGATGCGCATCAACCACGTTCGCGCGTTACTGAGCGATACCGATAAAAGTATTCTCGATATTGCCCTGACGGCAGGCTTTCGTTCAAGTAGTCGTTTTTACAGCACGTTCGGCAAATATGTCGGCATGTCGCCGCAACAATACCGCAAACTTAGCCAACAGCGCCGCCAGACGTTTCCCGGCTAA", - "dna_sequence_length": 909, - "functions": [ - "melibiose operon transcriptional regulator", - "autoregulator" - ], - "id": "CDS_4036", - "location": [ - [ - "NC_000913", - 4341628, - "-", - 909 - ] - ], - "md5": "41b1eba3728d373b2fbd4faf67114853", - "parent_gene": "", - "protein_md5": "0544ae6ac6e7dd6ca5dc2aa8872eecc9", - "protein_translation": "MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTFPG", - "protein_translation_length": 302, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948636" - ], - [ - "gene_synonym", - "JW4080" - ], - [ - "gene_synonym", - "NP_418543.1" - ], - [ - "gene_synonym", - "ECK4112" - ], - [ - "gene_synonym", - "mel-7" - ], - [ - "gene_synonym", - "b4119" - ], - [ - "gene_synonym", - "ASAP:ABE-0013493" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P06720" - ], - [ - "gene_synonym", - "EcoGene:EG10577" - ], - [ - "gene_synonym", - "GI:16131945" - ], - [ - "gene_synonym", - "melA" - ] - ], - "dna_sequence": "ATGATGTCTGCACCCAAAATTACATTTATCGGCGCTGGTTCGACGATTTTCGTTAAAAATATTCTTGGTGATGTGTTCCATCGCGAGGCGCTGAAAACGGCGCATATTGCCCTGATGGACATTGACCCCACCCGCCTGGAAGAGTCGCATATTGTGGTGCGTAAGCTGATGGATTCAGCAGGGGCCAGCGGCAAAATCACCTGCCACACCCAACAGAAAGAAGCCTTAGAGGATGCCGATTTTGTCGTGGTGGCATTTCAGATTGGCGGTTATGAACCTTGCACGGTGACTGATTTCGAGGTCTGTAAGCGGCATGGTCTGGAACAAACCATTGCCGATACGTTGGGGCCGGGCGGTATTATGCGCGCGCTACGTACCATTCCGCATCTGTGGCAAATTTGCGAGGACATGACGGAAGTCTGCCCCGATGCCACCATGCTCAACTATGTTAACCCAATGGCGATGAATACCTGGGCGATGTATGCCCGCTATCCGCATATCAAACAGGTCGGGCTGTGCCATTCGGTGCAGGGAACGGCGGAAGAGTTGGCGCGTGACCTCAATATCGACCCAGCTACGCTGCGTTACCGTTGCGCAGGTATCAACCATATGGCGTTTTACCTGGAGCTGGAGCGCAAAACCGCCGACGGCAGTTATGTGAATCTCTACCCGGAACTGCTGGCGGCTTATGAAGCAGGGCAGGCACCGAAGCCGAATATTCATGGCAATACTCGCTGCCAGAATATTGTGCGCTACGAAATGTTCAAAAAGCTGGGCTATTTCGTCACGGAATCGTCAGAACATTTTGCTGAGTACACACCGTGGTTTATTAAGCCAGGTCGTGAGGATTTGATTGAGCGTTATAAAGTACCGCTGGATGAGTACCCGAAACGCTGCGTCGAGCAGCTGGCGAACTGGCATAAAGAGCTGGAGGAGTATAAAAAAGCCTCCCGGATTGATATTAAACCGTCACGGGAATATGCCAGCACAATCATGAACGCTATCTGGACTGGCGAGCCGAGTGTGATTTACGGCAACGTCCGTAACGATGGTTTGATTGATAACCTGCCACAAGGATGTTGCGTGGAAGTAGCCTGTCTGGTTGATGCTAATGGCATTCAGCCGACCAAAGTCGGTACGCTACCTTCGCATCTGGCCGCCCTGATGCAAACCAACATCAACGTACAGACGCTGCTGACCGAAGCTATTCTTACGGAAAATCGCGACCGTGTTTACCACGCCGCGATGATGGACCCGCATACTGCCGCCGTGCTGGGCATTGACGAAATATATGCTCTTGTTGACGACCTGATTGCCGCCCACGGCGACTGGCTGCCAGGCTGGTTGCACCGTTAA", - "dna_sequence_length": 1356, - "functions": [ - "alpha-galactosidase, NAD(P)-binding" - ], - "id": "CDS_4037", - "location": [ - [ - "NC_000913", - 4341911, - "+", - 1356 - ] - ], - "md5": "7375ffd7dfc349df0375a725d272cf06", - "parent_gene": "", - "protein_md5": "6d505dc174f4ca3d2659b5f22e58656d", - "protein_translation": "MMSAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPTRLEESHIVVRKLMDSAGASGKITCHTQQKEALEDADFVVVAFQIGGYEPCTVTDFEVCKRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATMLNYVNPMAMNTWAMYARYPHIKQVGLCHSVQGTAEELARDLNIDPATLRYRCAGINHMAFYLELERKTADGSYVNLYPELLAAYEAGQAPKPNIHGNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWFIKPGREDLIERYKVPLDEYPKRCVEQLANWHKELEEYKKASRIDIKPSREYASTIMNAIWTGEPSVIYGNVRNDGLIDNLPQGCCVEVACLVDANGIQPTKVGTLPSHLAALMQTNINVQTLLTEAILTENRDRVYHAAMMDPHTAAVLGIDEIYALVDDLIAAHGDWLPGWLHR", - "protein_translation_length": 451, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4120" - ], - [ - "gene_synonym", - "GeneID:948635" - ], - [ - "gene_synonym", - "mel-4" - ], - [ - "gene_synonym", - "ECK4113" - ], - [ - "gene_synonym", - "ASAP:ABE-0013495" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02921" - ], - [ - "gene_synonym", - "GI:345452725" - ], - [ - "gene_synonym", - "NP_418544.2" - ], - [ - "gene_synonym", - "melB" - ], - [ - "gene_synonym", - "JW4081" - ], - [ - "gene_synonym", - "EcoGene:EG10578" - ] - ], - "dna_sequence": "ATGAGCATTTCAATGACTACAAAACTCAGTTATGGATTTGGAGCGTTCGGGAAGGATTTTGCGATCGGCATTGTGTATATGTACCTCATGTATTACTACACCGATGTCGTCGGGCTGTCTGTGGGTTTGGTCGGTACTTTGTTTCTGGTGGCGAGGATCTGGGATGCTATTAACGATCCGATTATGGGATGGATTGTAAATGCTACGCGATCGCGATGGGGTAAGTTCAAACCCTGGATCCTGATCGGTACGTTGGCAAACTCTGTAATCTTATTTCTCCTCTTTAGTGCGCATCTGTTTGAAGGTACTACTCAGATTGTCTTTGTTTGCGTGACCTACATCCTCTGGGGCATGACTTACACCATTATGGATATTCCCTTCTGGTCGCTGGTTCCAACCATCACGCTCGATAAACGTGAGCGCGAACAACTGGTTCCTTATCCGCGTTTTTTTGCCAGTCTGGCAGGCTTTGTTACGGCAGGTGTGACGCTACCATTTGTTAATTATGTCGGCGGTGGCGATCGGGGATTTGGCTTTCAGATGTTCACTCTGGTACTGATCGCCTTTTTTATTGTTTCAACCATCATCACTCTGCGCAATGTGCATGAAGTCTTTTCGTCAGACAATCAACCGTCTGCTGAAGGAAGCCATCTGACACTTAAAGCCATCGTTGCGCTAATTTATAAAAACGATCAGCTTTCATGCCTCTTGGGTATGGCTCTTGCTTATAATGTAGCCAGCAACATTATTACCGGCTTTGCTATCTATTATTTCTCATATGTTATCGGTGATGCGGATTTGTTCCCCTATTATCTGTCGTATGCGGGAGCTGCTAACCTGGTGACGTTAGTATTCTTCCCACGCTTAGTTAAATCATTATCCCGACGCATTTTATGGGCCGGAGCATCTATTCTTCCGGTGTTAAGCTGTGGTGTTCTCCTGTTAATGGCATTAATGAGCTATCACAACGTCGTCCTCATTGTGATTGCGGGTATTTTGCTGAATGTGGGAACGGCGCTTTTCTGGGTATTACAGGTCATCATGGTGGCAGATATCGTTGATTACGGTGAATATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAATGTTGAACAGTCTACGCAAGCCCTATTAGGTATGCAGTTTATTATGATTGCTCTACCAACTCTGTTTTTCATGGTAACGCTGATTCTCTACTTCCGTTTCTATCGCCTCAATGGTGACACGCTGCGCAGGATCCAGATCCATCTGCTGGATAAATATCGCAAAGTACCGCCCGAGCCTGTTCATGCTGATATTCCGGTCGGTGCAGTGAGTGATGTGAAAGCCTGA", - "dna_sequence_length": 1422, - "functions": [ - "melibiose:sodium symporter" - ], - "id": "CDS_4038", - "location": [ - [ - "NC_000913", - 4343369, - "+", - 1422 - ] - ], - "md5": "0d4d61b81a86c42275437e9d32611fc1", - "parent_gene": "", - "protein_md5": "8a43e1986b9cb0617db03e55a681a7a6", - "protein_translation": "MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNATRSRWGKFKPWILIGTLANSVILFLLFSAHLFEGTTQIVFVCVTYILWGMTYTIMDIPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVFSSDNQPSAEGSHLTLKAIVALIYKNDQLSCLLGMALAYNVASNIITGFAIYYFSYVIGDADLFPYYLSYAGAANLVTLVFFPRLVKSLSRRILWAGASILPVLSCGVLLLMALMSYHNVVLIVIAGILLNVGTALFWVLQVIMVADIVDYGEYKLHVRCESIAYSVQTMVVKGGSAFAAFFIAVVLGMIGYVPNVEQSTQALLGMQFIMIALPTLFFMVTLILYFRFYRLNGDTLRRIQIHLLDKYRKVPPEPVHADIPVGAVSDVKA", - "protein_translation_length": 473, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4121" - ], - [ - "gene_synonym", - "ASAP:ABE-0013498" - ], - [ - "gene_synonym", - "GeneID:948634" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39270" - ], - [ - "gene_synonym", - "NP_418545.1" - ], - [ - "gene_synonym", - "ECK4114" - ], - [ - "gene_synonym", - "EcoGene:EG12463" - ], - [ - "gene_synonym", - "GI:16131947" - ], - [ - "gene_synonym", - "yjdF" - ], - [ - "gene_synonym", - "JW4082" - ] - ], - "dna_sequence": "ATGACCCGCACACTCAAGCCGTTAATTCTTAACACCAGCGCACTGACGCTAACGTTAATCCTGATTTATACCGGCATTTCGGCCCATGACAAACTCACCTGGCTGATGGAAGTGACACCGGTGATTATTGTCGTGCAGCTACTGCTTGCCACCGCCAGACGTTATCCGTTAACGCCGCTGCTCTATACGCTCATTTTCCTTCACGCCATCATCCTGATGGTCGGCGGACAATACACCTACGCGAAAGTCCCCGTTGGTTTTGAGGTGCAGGAATGGCTGGGGTTGAGTCGTAATCCGTATGACAAGCTGGGGCACTTTTTCCAGGGGCTGGTGCCTGCACTGGTGGCACGAGAAATTCTCGTTCGCGGGATGTACGTGCGCGGACGTAAAATGGTGGCGTTCCTGGTCTGCTGCGTGGCGCTGGCGATAAGCGCGATGTATGAATTAATCGAGTGGTGGGCAGCGCTGGCAATGGGTCAGGGAGCGGATGATTTTCTCGGCACCCAGGGCGACCAGTGGGACACGCAATCCGATATGTTCTGCGCGCTGCTTGGCGCATTAACGACGGTGATATTCCTCGCTCGCTTTCATTGCCGCCAGCTACGGCGCTTTGGCTTGATAACCGGATAA", - "dna_sequence_length": 630, - "functions": [ - "DUF2238 family inner membrane protein" - ], - "id": "CDS_4039", - "location": [ - [ - "NC_000913", - 4345558, - "-", - 630 - ] - ], - "md5": "fa5b39d8a28c46db78e4f21aa2426aee", - "parent_gene": "", - "protein_md5": "06bd095844d1521af83312ef0cd60b98", - "protein_translation": "MTRTLKPLILNTSALTLTLILIYTGISAHDKLTWLMEVTPVIIVVQLLLATARRYPLTPLLYTLIFLHAIILMVGGQYTYAKVPVGFEVQEWLGLSRNPYDKLGHFFQGLVPALVAREILVRGMYVRGRKMVAFLVCCVALAISAMYELIEWWAALAMGQGADDFLGTQGDQWDTQSDMFCALLGALTTVIFLARFHCRQLRRFGLITG", - "protein_translation_length": 209, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4122" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P14407" - ], - [ - "gene_synonym", - "NP_418546.1" - ], - [ - "gene_synonym", - "fumB" - ], - [ - "gene_synonym", - "ECK4115" - ], - [ - "gene_synonym", - "ASAP:ABE-0013501" - ], - [ - "gene_synonym", - "GeneID:948642" - ], - [ - "gene_synonym", - "JW4083" - ], - [ - "gene_synonym", - "GI:16131948" - ], - [ - "gene_synonym", - "EcoGene:EG10357" - ] - ], - "dna_sequence": "ATGTCAAACAAACCCTTTATCTACCAGGCACCTTTCCCGATGGGGAAAGACAATACCGAATACTATCTACTCACTTCCGATTACGTTAGCGTTGCCGACTTCGACGGCGAAACCATCCTGAAAGTGGAACCAGAAGCCCTGACCCTGCTGGCGCAGCAAGCCTTTCACGACGCTTCTTTTATGCTCCGCCCGGCACACCAGAAACAGGTTGCGGCTATTCTTCACGATCCAGAAGCCAGCGAAAACGACAAGTACGTGGCGCTGCAATTCTTAAGAAACTCCGAAATCGCCGCCAAAGGCGTGCTGCCGACCTGCCAGGATACCGGCACCGCGATCATCGTCGGTAAAAAAGGCCAGCGCGTGTGGACCGGCGGCGGTGATGAAGAAACGCTGTCGAAAGGCGTCTATAACACCTATATCGAAGATAACCTGCGCTATTCACAGAATGCGGCGCTGGACATGTACAAAGAGGTCAACACCGGCACTAACCTGCCTGCGCAAATCGACCTGTACGCGGTAGATGGCGATGAGTACAAATTCCTTTGCGTTGCGAAAGGCGGCGGCTCTGCCAACAAAACGTATCTCTACCAGGAAACCAAAGCCCTGCTGACTCCCGGCAAACTGAAAAACTTCCTCGTCGAGAAAATGCGTACCCTCGGTACTGCAGCCTGCCCGCCGTACCATATCGCGTTTGTGATTGGCGGTACGTCTGCGGAAACCAACCTGAAAACCGTCAAGTTAGCAAGCGCTCACTATTACGATGAACTGCCGACGGAAGGGAACGAACATGGTCAGGCGTTCCGCGATGTCCAGCTGGAACAGGAACTGCTGGAAGAGGCCCAGAAACTCGGTCTTGGCGCGCAGTTTGGCGGTAAATACTTCGCGCACGACATTCGCGTTATCCGTCTGCCACGTCACGGCGCATCCTGCCCGGTCGGCATGGGCGTCTCCTGCTCCGCTGACCGTAACATTAAAGCGAAAATCAACCGCGAAGGTATCTGGATCGAAAAACTGGAACACAACCCAGGCCAGTACATTCCACAAGAACTGCGCCAGGCCGGTGAAGGCGAAGCGGTGAAAGTTGACCTTAACCGCCCGATGAAAGAGATCCTCGCCCAGCTTTCGCAATACCCGGTATCCACTCGTTTGTCGCTCACCGGCACCATTATCGTGGGCCGAGATATTGCACACGCCAAGCTGAAAGAGCTGATTGACGCCGGTAAAGAACTTCCGCAGTACATCAAAGATCACCCGATCTACTACGCGGGTCCGGCGAAAACCCCTGCCGGTTATCCATCAGGTTCACTTGGCCCAACCACCGCAGGCCGTATGGACTCCTACGTGGATCTGCTGCAATCCCACGGCGGCAGCATGATCATGCTGGCGAAAGGTAACCGCAGTCAGCAGGTTACCGACGCGTGTCATAAACACGGCGGCTTCTACCTCGGTAGCATCGGCGGTCCGGCGGCGGTACTGGCGCAGCAGAGCATCAAGCATCTGGAGTGCGTCGCTTATCCGGAGCTGGGTATGGAAGCTATCTGGAAAATCGAAGTAGAAGATTTCCCGGCGTTTATCCTGGTCGATGACAAAGGTAACGACTTCTTCCAGCAAATCGTCAACAAACAGTGCGCGAACTGCACTAAGTAA", - "dna_sequence_length": 1647, - "functions": [ - "anaerobic class I fumarate hydratase (fumarase B)" - ], - "id": "CDS_4040", - "location": [ - [ - "NC_000913", - 4347326, - "-", - 1647 - ] - ], - "md5": "b9ebfabef31cfb164ef77a24edf298bc", - "parent_gene": "", - "protein_md5": "3ae4d43505c990161419f906e48968a9", - "protein_translation": "MSNKPFIYQAPFPMGKDNTEYYLLTSDYVSVADFDGETILKVEPEALTLLAQQAFHDASFMLRPAHQKQVAAILHDPEASENDKYVALQFLRNSEIAAKGVLPTCQDTGTAIIVGKKGQRVWTGGGDEETLSKGVYNTYIEDNLRYSQNAALDMYKEVNTGTNLPAQIDLYAVDGDEYKFLCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRTLGTAACPPYHIAFVIGGTSAETNLKTVKLASAHYYDELPTEGNEHGQAFRDVQLEQELLEEAQKLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINREGIWIEKLEHNPGQYIPQELRQAGEGEAVKVDLNRPMKEILAQLSQYPVSTRLSLTGTIIVGRDIAHAKLKELIDAGKELPQYIKDHPIYYAGPAKTPAGYPSGSLGPTTAGRMDSYVDLLQSHGGSMIMLAKGNRSQQVTDACHKHGGFYLGSIGGPAAVLAQQSIKHLECVAYPELGMEAIWKIEVEDFPAFILVDDKGNDFFQQIVNKQCANCTK", - "protein_translation_length": 548, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4123" - ], - [ - "gene_synonym", - "ECK4116" - ], - [ - "gene_synonym", - "dcuB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABN9" - ], - [ - "gene_synonym", - "GeneID:948641" - ], - [ - "gene_synonym", - "genF" - ], - [ - "gene_synonym", - "NP_418547.1" - ], - [ - "gene_synonym", - "GI:16131949" - ], - [ - "gene_synonym", - "ASAP:ABE-0013503" - ], - [ - "gene_synonym", - "EcoGene:EG10006" - ], - [ - "gene_synonym", - "JW4084" - ] - ], - "dna_sequence": "ATGTTATTTACTATCCAACTTATCATAATACTGATATGTCTGTTTTATGGTGCCAGAAAGGGTGGTATCGCGCTGGGTTTATTAGGCGGTATCGGTCTGGTCATTCTGGTCTTCGTCTTCCACCTTCAGCCAGGTAAACCACCAGTTGATGTCATGCTGGTTATCATTGCGGTGGTGGCGGCATCGGCGACCTTGCAAGCTTCGGGCGGTCTTGATGTCATGCTGCAAATTGCCGAGAAGCTGCTGCGCCGCAACCCGAAATATGTCTCAATTGTCGCGCCGTTTGTGACCTGTACACTGACCATTCTTTGCGGTACGGGTCATGTGGTTTACACCATTCTGCCGATCATCTACGACGTCGCCATTAAGAACAACATCCGTCCGGAACGTCCGATGGCGGCAAGTTCTATCGGTGCACAGATGGGGATTATCGCCAGTCCGGTGTCGGTTGCGGTCGTGTCTCTGGTTGCGATGCTGGGTAATGTCACCTTTGATGGTCGCCATCTTGAGTTCCTCGATCTGCTGGCAATCACCATTCCATCGACGTTAATCGGTATCCTGGCGATCGGTATCTTCAGCTGGTTCCGCGGTAAAGATCTGGATAAAGACGAAGAGTTCCAGAAATTCATCTCCGTACCGGAAAACCGTGAGTATGTTTACGGTGATACCGCGACGCTGCTGGATAAAAAACTGCCGAAAAGCAACTGGCTGGCAATGTGGATTTTCCTCGGGGCAATCGCTGTAGTCGCCCTTCTTGGTGCTGATTCGGACCTGCGTCCATCCTTCGGCGGCAAACCGCTGTCGATGGTACTGGTTATTCAGATGTTTATGCTGCTGACCGGGGCGCTGATTATTATCCTGACCAAAACCAATCCCGCGTCTATCTCAAAAAACGAAGTCTTCCGTTCCGGTATGATCGCCATCGTGGCGGTGTACGGTATCGCATGGATGGCAGAAACCATGTTCGGTGCGCATATGTCTGAAATTCAGGGCGTACTGGGTGAAATGGTGAAAGAGTATCCGTGGGCCTATGCCATTGTTCTGCTGCTGGTTTCCAAGTTTGTAAACTCTCAGGCTGCGGCGCTGGCGGCGATTGTTCCGGTCGCGCTGGCGATCGGCGTTGATCCGGCATACATCGTGGCTTCAGCACCGGCTTGCTACGGTTATTACATCCTGCCGACTTATCCGAGCGATCTGGCAGCGATTCAGTTTGACCGTTCCGGCACCACCCACATCGGTCGCTTCGTCATCAACCACAGCTTTATTCTGCCGGGGTTGATTGGTGTGAGCGTATCGTGCGTCTTCGGCTGGATCTTCGCCGCGATGTACGGGTTCTTATAA", - "dna_sequence_length": 1341, - "functions": [ - "C4-dicarboxylate transporter, anaerobic", - "DcuS co-sensor" - ], - "id": "CDS_4041", - "location": [ - [ - "NC_000913", - 4348744, - "-", - 1341 - ] - ], - "md5": "0f2e2c772c748e792636409c4feb9e5b", - "parent_gene": "", - "protein_md5": "7d1a88b095b80496a6d16a9d46c36d98", - "protein_translation": "MLFTIQLIIILICLFYGARKGGIALGLLGGIGLVILVFVFHLQPGKPPVDVMLVIIAVVAASATLQASGGLDVMLQIAEKLLRRNPKYVSIVAPFVTCTLTILCGTGHVVYTILPIIYDVAIKNNIRPERPMAASSIGAQMGIIASPVSVAVVSLVAMLGNVTFDGRHLEFLDLLAITIPSTLIGILAIGIFSWFRGKDLDKDEEFQKFISVPENREYVYGDTATLLDKKLPKSNWLAMWIFLGAIAVVALLGADSDLRPSFGGKPLSMVLVIQMFMLLTGALIIILTKTNPASISKNEVFRSGMIAIVAVYGIAWMAETMFGAHMSEIQGVLGEMVKEYPWAYAIVLLLVSKFVNSQAAALAAIVPVALAIGVDPAYIVASAPACYGYYILPTYPSDLAAIQFDRSGTTHIGRFVINHSFILPGLIGVSVSCVFGWIFAAMYGFL", - "protein_translation_length": 446, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4124" - ], - [ - "gene_synonym", - "GeneID:948640" - ], - [ - "gene_synonym", - "NP_418548.1" - ], - [ - "gene_synonym", - "ECK4117" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD01" - ], - [ - "gene_synonym", - "ASAP:ABE-0013507" - ], - [ - "gene_synonym", - "dcuR" - ], - [ - "gene_synonym", - "yjdG" - ], - [ - "gene_synonym", - "EcoGene:EG12464" - ], - [ - "gene_synonym", - "GI:16131950" - ], - [ - "gene_synonym", - "JW4085" - ] - ], - "dna_sequence": "ATGATCAATGTATTAATTATCGATGACGACGCAATGGTCGCGGAGCTGAATCGCCGATACGTAGCACAAATCCCAGGCTTTCAATGCTGTGGAACAGCCTCGACGCTGGAGAAAGCCAAAGAGATTATCTTCAATAGCGATACGCCTATCGACCTGATATTGCTCGATATCTATATGCAAAAAGAGAACGGGCTCGATTTACTGCCTGTCCTGCATAACGCGCGTTGCAAAAGTGATGTGATTGTCATCTCCTCCGCAGCCGATGCGGCAACCATTAAAGATTCGCTGCATTACGGTGTCGTGGATTACCTGATCAAACCCTTCCAGGCTTCCCGCTTTGAAGAGGCGCTCACCGGCTGGCGGCAAAAGAAAATGGCGCTGGAAAAACATCAGTATTATGACCAGGCCGAGCTTGATCAGCTAATCCACGGCAGCAGCTCCAACGAACAGGATCCTCGTCGCTTGCCAAAAGGCTTAACGCCGCAGACGTTACGCACACTGTGCCAGTGGATTGACGCGCATCAGGACTATGAATTTTCAACCGACGAGCTAGCCAACGAGGTTAACATTTCGCGTGTTTCCTGCCGTAAATACCTCATCTGGCTGGTCAACTGCCACATCTTGTTCACCAGTATCCATTATGGCGTCACGGGGCGTCCAGTTTACCGTTACCGTATTCAGGCAGAACACTACTCACTACTGAAACAATATTGCCAATAA", - "dna_sequence_length": 720, - "functions": [ - "response regulator in two-component regulatory system with DcuS" - ], - "id": "CDS_4042", - "location": [ - [ - "NC_000913", - 4350034, - "-", - 720 - ] - ], - "md5": "a85a1bdc2bfd289ea34d28c1707902d5", - "parent_gene": "", - "protein_md5": "62bbf7dad703c9502be42d1679853d2e", - "protein_translation": "MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVDYLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLTPQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ", - "protein_translation_length": 239, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4118" - ], - [ - "gene_synonym", - "b4125" - ], - [ - "gene_synonym", - "EcoGene:EG12465" - ], - [ - "gene_synonym", - "NP_418549.1" - ], - [ - "gene_synonym", - "GeneID:948639" - ], - [ - "gene_synonym", - "ASAP:ABE-0013509" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AEC8" - ], - [ - "gene_synonym", - "yjdH" - ], - [ - "gene_synonym", - "GI:16131951" - ], - [ - "gene_synonym", - "JW4086" - ], - [ - "gene_synonym", - "dcuS" - ] - ], - "dna_sequence": "ATGAGACATTCATTGCCCTACCGCATGTTACGCAAACGTCCGATGAAATTGAGTACCACAGTGATCTTAATGGTCAGTGCGGTACTGTTCTCGGTGCTATTGGTGGTGCATCTGATTTACTTCTCGCAAATCAGTGATATGACGCGAGATGGGCTAGCCAACAAGGCACTGGCAGTGGCGCGTACCCTCGCCGACTCGCCGGAAATCCGTCAGGGCTTGCAGAAAAAACCGCAGGAGAGTGGCATCCAGGCCATCGCGGAAGCCGTACGCAAACGCAACGATCTGCTGTTTATTGTCGTTACCGATATGCAAAGTCTTCGCTACTCGCATCCTGAAGCCCAGCGTATTGGTCAGCCATTTAAAGGTGATGACATCCTTAAAGCGCTGAATGGCGAAGAAAATGTCGCTATCAATCGCGGTTTTCTGGCGCAGGCTTTACGCGTATTTACCCCCATCTACGATGAAAATCATAAACAAATTGGCGTGGTGGCGATCGGCCTTGAGTTAAGCCGTGTGACCCAACAGATCAATGACAGTCGCTGGAGCATTATCTGGTCGGTATTATTTGGCATGCTGGTCGGACTGATTGGCACCTGCATTCTGGTTAAGGTACTGAAAAAAATCCTTTTCGGCCTGGAACCCTACGAAATCTCCACGCTGTTTGAGCAACGCCAGGCCATGTTGCAGTCTATCAAAGAAGGCGTCGTTGCCGTGGACGATCGCGGCGAGGTCACGCTGATCAACGATGCCGCACAAGAATTGCTGAATTACCGTAAGTCGCAGGACGATGAGAAACTGTCGACGCTAAGCCACTCATGGTCACAGGTGGTAGATGTCTCGGAAGTGTTACGCGACGGTACCCCGCGCCGCGACGAAGAGATTACGATTAAAGACCGGCTATTACTGATCAACACCGTTCCGGTGCGCAGTAATGGCGTTATCATCGGTGCCATTTCAACCTTCAGGGACAAAACTGAAGTACGTAAACTGATGCAGCGACTCGACGGTCTGGTCAACTATGCTGACGCACTTCGTGAACGATCCCACGAATTTATGAATAAATTGCATGTGATTCTCGGATTATTGCATCTGAAGAGTTATAAGCAGTTGGAAGATTACATTCTCAAAACAGCCAATAACTATCAGGAAGAGATTGGCTCTCTGCTGGGTAAGATCAAATCTCCGGTTATCGCTGGTTTTTTAATCAGCAAGATTAACCGCGCGACCGATTTAGGCCATACGCTGATTTTAAACAGTGAAAGCCAGCTGCCAGACAGCGGCAGTGAGGACCAGGTCGCGACGCTGATTACCACGTTGGGAAATCTGATAGAAAACGCGCTGGAGGCATTAGGGCCGGAACCCGGAGGCGAAATTAGCGTAACATTGCACTACCGTCACGGCTGGCTGCACTGTGAAGTTAATGATGATGGACCGGGGATCGCACCCGATAAAATCGATCACATTTTTGACAAAGGTGTCTCGACAAAAGGAAGCGAGCGAGGCGTCGGTTTAGCACTTGTCAAACAACAGGTAGAAAATCTCGGCGGCAGCATCGCCGTGGAATCGGAACCCGGGATTTTCACACAATTTTTTGTCCAGATACCCTGGGACGGGGAGAGGTCGAACAGATGA", 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"CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4119" - ], - [ - "gene_synonym", - "EcoGene:EG12466" - ], - [ - "gene_synonym", - "b4126" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF59" - ], - [ - "gene_synonym", - "ASAP:ABE-0013513" - ], - [ - "gene_synonym", - "yjdI" - ], - [ - "gene_synonym", - "NP_418550.1" - ], - [ - "gene_synonym", - "JW4087" - ], - [ - "gene_synonym", - "GeneID:948648" - ], - [ - "gene_synonym", - "GI:16131952" - ] - ], - "dna_sequence": "ATGGATCAGGCGCTACTGGACGGGGGTTATCGCTGTTATACCGGCGAAAAGATCGATGTCTATTTCAACACTGCGATATGTCAGCATTCTGGCAATTGCGTACGTGGCAACGGCAAGTTATTTAATCTCAAACGAAAGCCGTGGATCATGCCGGATGAAGTCGACGTCGCCACTGTGGTTAAAGTGATTGATACGTGCCCGAGCGGCGCGCTGAAATACCGTCATAAATAA", - "dna_sequence_length": 231, - "functions": [ - "putative 4Fe-4S mono-cluster protein" - ], - "id": "CDS_4044", - "location": [ - [ - "NC_000913", - 4351843, - "+", - 231 - ] - ], - "md5": "1ef88d4c23fe5ec4eff1095251c8da8f", - "parent_gene": "", - "protein_md5": "a4d2334bb8fdfdcffe5daa6acb9eda80", - "protein_translation": "MDQALLDGGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLKRKPWIMPDEVDVATVVKVIDTCPSGALKYRHK", - "protein_translation_length": 76, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4120" - ], - [ - "gene_synonym", - "EcoGene:EG12467" - ], - [ - "gene_synonym", - "NP_418551.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39274" - ], - [ - "gene_synonym", - "b4127" - ], - [ - "gene_synonym", - "GeneID:948647" - ], - [ - "gene_synonym", - "JW4088" - ], - [ - "gene_synonym", - "ASAP:ABE-0013515" - ], - [ - "gene_synonym", - "yjdJ" - ], - [ - "gene_synonym", - "GI:16131953" - ] - ], - "dna_sequence": "ATGGAAATACGCGAAGGCCACAATAAATTTTACATTAATGACAAACAAGGCAAGCAAATCGCTGAAATTGTCTTTGTGCCGACCGGAGAGAATTTAGCGATTATCGAACATACCGATGTCGATGAAAGCCTGAAAGGGCAAGGGATTGGTAAACAGCTGGTTGCGAAAGTCGTGGAAAAAATGCGTCGGGAAAAACGAAAAATTATCCCATTATGCCCATTTGCGAAACATGAATTTGATAAAACGCGGGAGTATGATGATATTCGCAGTTGA", - "dna_sequence_length": 273, - "functions": [ - "GNAT family putative N-acetyltransferase" - ], - "id": "CDS_4045", - "location": [ - [ - "NC_000913", - 4352085, - "+", - 273 - ] - ], - "md5": "adcb6507c44b9e9d9aa7d79f3b5833e6", - "parent_gene": "", - "protein_md5": "2b5f1c1b38a8e69a6bcb5dce2d9bf6f2", - "protein_translation": "MEIREGHNKFYINDKQGKQIAEIVFVPTGENLAIIEHTDVDESLKGQGIGKQLVAKVVEKMRREKRKIIPLCPFAKHEFDKTREYDDIRS", - "protein_translation_length": 90, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4121" - ], - [ - "gene_synonym", - "EcoGene:EG12468" - ], - [ - "gene_synonym", - "b4128" - ], - [ - "gene_synonym", - "GeneID:948646" - ], - [ - "gene_synonym", - "NP_418552.1" - ], - [ - "gene_synonym", - "JW4089" - ], - [ - "gene_synonym", - "GI:16131954" - ], - [ - "gene_synonym", - "yjdK" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF61" - ], - [ - "gene_synonym", - "ASAP:ABE-0013518" - ], - [ - "gene_synonym", - "ghoS" - ] - ], - "dna_sequence": "ATGGAAGGTAAAAACAAGTTCAATACTTATGTTGTTTCTTTTGATTATCCATCATCTTATTCCTCAGTGTTCTTAAGATTAAGATCATTGATGTATGATATGAATTTCTCCTCTATCGTGGCTGATGAATATGGGATACCACGACAATTGAATGAAAACTCCTTCGCAATAACGACATCGTTAGCCGCAAGTGAAATCGAAGATTTAATCAGGCTCAAATGCTTAGACTTACCGGATATTGATTTTGACCTCAACATTATGACAGTTGATGACTATTTCCGTCAGTTTTACAAGTAG", - "dna_sequence_length": 297, - "functions": [ - "antitoxin of GhoTS toxin-antitoxin pair", - "endonuclease for ghoT mRNA" - ], - "id": "CDS_4046", - "location": [ - [ - "NC_000913", - 4352584, - "+", - 297 - ] - ], - "md5": "ba99ac6dcdf0140a6252382fd9e36070", - "parent_gene": "", - "protein_md5": "f493d69733f522a4c27501a938b03886", - "protein_translation": "MEGKNKFNTYVVSFDYPSSYSSVFLRLRSLMYDMNFSSIVADEYGIPRQLNENSFAITTSLAASEIEDLIRLKCLDLPDIDFDLNIMTVDDYFRQFYK", - "protein_translation_length": 98, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4122" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P64646" - ], - [ - "gene_synonym", - "EcoGene:EG14342" - ], - [ - "gene_synonym", - "b4559" - ], - [ - "gene_synonym", - "ASAP:ABE-0285080" - ], - [ - "gene_synonym", - "GeneID:1450308" - ], - [ - "gene_synonym", - "YP_588474.1" - ], - [ - "gene_synonym", - "GI:94541131" - ], - [ - "gene_synonym", - "ghoT" - ], - [ - "gene_synonym", - "yjdO" - ], - [ - "gene_synonym", - "JW5732" - ] - ], - "dna_sequence": "ATGGCACTATTCTCTAAAATATTAATTTTTTATGTGATTGGTGTGAACATATCCTTTGTCATTATCTGGTTTATCTCACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAG", - "dna_sequence_length": 174, - "functions": [ - "toxin of GhoTS toxin-antitoxin pair", - "membrane-lytic protein", - "stimulator of persister cell formation" - ], - "id": "CDS_4047", - "location": [ - [ - "NC_000913", - 4352908, - "+", - 174 - ] - ], - "md5": "5efa1f2854097ac027e6d02d6ecf0525", - "parent_gene": "", - "protein_md5": "4ab13bfa7f38d4245489085048fe75b8", - "protein_translation": "MALFSKILIFYVIGVNISFVIIWFISHEKTHIRLLSAFLVGITWPMSLPVALLFSLF", - "protein_translation_length": 57, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4123" - ], - [ - "gene_synonym", - "b4129" - ], - [ - "gene_synonym", - "GeneID:948645" - ], - [ - "gene_synonym", - "EcoGene:EG10553" - ], - [ - "gene_synonym", - "ASAP:ABE-0013520" - ], - [ - "gene_synonym", - "NP_418553.1" - ], - [ - "gene_synonym", - "GI:16131955" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8N5" - ], - [ - "gene_synonym", - "JW4090" - ], - [ - "gene_synonym", - "lysU" - ] - ], - "dna_sequence": "ATGTCTGAACAAGAAACACGGGGAGCCAATGAGGCTATTGATTTTAACGATGAACTGAGAAATCGCCGCGAAAAACTGGCGGCACTACGTCAGCAAGGTGTGGCGTTTCCCAATGATTTTCGCCGCGACCATACCTCTGACCAGTTGCACGAAGAGTTTGATGCGAAGGATAACCAGGAACTGGAATCCTTAAACATTGAAGTCTCGGTTGCTGGCCGAATGATGACCCGTCGTATCATGGGGAAAGCCTCCTTTGTAACGTTGCAGGATGTCGGTGGCCGTATTCAACTGTACGTTGCAAGAGATAGCCTGCCAGAAGGTGTTTATAACGATCAGTTTAAAAAATGGGATCTGGGTGACATTATCGGTGCCCGCGGTACGCTGTTTAAGACGCAAACGGGTGAGCTTTCCATTCACTGTACTGAGCTGCGCCTGCTGACTAAAGCACTACGTCCTTTACCAGATAAATTCCATGGTCTGCAGGATCAGGAAGTCCGTTATCGTCAACGTTATCTGGACCTCATCGCTAACGATAAATCCCGTCAAACGTTTGTTGTCCGTTCAAAAATTCTGGCCGCTATCCGTCAATTCATGGTCGCGCGCGGCTTTATGGAAGTAGAAACCCCGATGATGCAGGTAATTCCAGGTGGGGCATCTGCTCGCCCGTTTATTACCCATCATAATGCTCTGGATTTAGATATGTATCTGCGTATCGCGCCGGAGCTGTATCTGAAACGTCTGGTTGTAGGCGGTTTTGAACGGGTATTCGAAATCAACCGTAACTTCCGTAATGAAGGTATTTCTGTTCGCCATAATCCTGAGTTCACAATGATGGAACTCTACATGGCGTATGCGGATTACCACGATTTGATTGAACTGACAGAGTCACTGTTCCGCACCCTGGCACAAGAGGTTCTGGGTACCACTAAAGTCACTTATGGCGAGCATGTGTTTGATTTCGGCAAACCGTTTGAAAAACTCACCATGCGCGAAGCAATCAAAAAATATCGTCCAGAAACCGATATGGCCGACCTGGATAATTTTGATGCTGCTAAAGCATTAGCTGAATCTATCGGTATTACGGTAGAGAAAAGCTGGGGGTTGGGACGTATTGTCACAGAGATCTTTGATGAAGTGGCAGAAGCACATCTGATTCAGCCAACCTTTATTACGGAATATCCGGCAGAAGTGTCCCCGCTGGCACGCCGTAATGATGTTAACCCGGAAATCACCGACCGTTTTGAATTCTTCATCGGTGGTCGTGAAATCGGTAATGGTTTTAGCGAATTAAACGACGCAGAAGATCAGGCTGAACGTTTCCAGGAACAGGTTAATGCTAAAGCTGCAGGTGACGACGAAGCCATGTTCTATGACGAAGATTACGTGACTGCGCTGGAATATGGTCTGCCGCCAACCGCTGGTCTGGGTATTGGTATCGACCGAATGATTATGCTGTTTACTAACAGCCATACTATTCGCGACGTTATTCTCTTCCCGGCGATGCGCCCACAGAAATAA", 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- "gene_synonym", - "ECK4124" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39276" - ], - [ - "gene_synonym", - "EcoGene:EG12469" - ], - [ - "gene_synonym", - "b4130" - ], - [ - "gene_synonym", - "JW4091" - ], - [ - "gene_synonym", - "GeneID:948644" - ], - [ - "gene_synonym", - "ASAP:ABE-0013524" - ], - [ - "gene_synonym", - "dtpC" - ], - [ - "gene_synonym", - "yjdL" - ] - ], - "dna_sequence": "ATGAAAACACCCTCACAGCCGCGCGCGATATACTATATCGTGGCGATCCAAATCTGGGAGTACTTCAGTTTTTACGGCATGCGTGCCTTACTCATTCTCTATCTCACCCATCAGCTTGGTTTTGATGATAACCATGCCATCAGCCTGTTCAGCGCATATGCTTCTCTGGTTTACGTTACCCCTATTCTCGGCGGCTGGCTTGCCGACCGCCTGCTCGGCAACCGCACTGCAGTGATTGCCGGCGCGCTGTTAATGACCCTTGGCCATGTGGTGCTGGGTATTGATACAAATTCAACCTTTAGCCTGTATCTGGCGCTGGCAATCATTATTTGTGGCTACGGTTTATTCAAATCAAACATCAGCTGTTTGCTTGGCGAGCTCTACGACGAGAACGATCATCGACGTGATGGCGGTTTTTCGCTGCTGTATGCTGCGGGCAATATCGGTTCTATCGCAGCCCCAATCGCCTGCGGCCTGGCTGCTCAGTGGTATGGATGGCATGTTGGCTTTGCCCTTGCGGGTGGCGGCATGTTTATCGGTTTGTTGATTTTCTTAAGCGGTCATCGTCATTTCCAGTCCACACGTAGTATGGATAAAAAAGCGCTCACTAGTGTCAAATTTGCCTTACCAGTATGGAGCTGGTTAGTGGTGATGCTCTGTTTAGCCCCAGTATTTTTTACTCTGCTGCTGGAGAACGACTGGTCCGGATATTTGCTGGCGATCGTTTGCCTCATTGCCGCACAAATCATTGCCCGCATGATGATCAAATTCCCCGAACATCGCCGTGCTCTTTGGCAAATTGTATTGTTGATGTTTGTCGGGACATTGTTCTGGGTACTGGCACAACAGGGCGGCAGTACCATCAGCTTGTTTATCGATCGCTTTGTGAATCGTCAGGCATTCAATATTGAAGTACCTACAGCACTATTCCAGTCGGTGAATGCAATTGCGGTGATGCTCGCTGGGGTTGTACTGGCCTGGCTGGCGTCGCCAGAAAGCCGCGGCAACTCAACATTGCGCGTCTGGCTGAAGTTTGCCTTTGGCTTACTGCTGATGGCTTGTGGCTTTATGTTGTTGGCATTTGATGCCCGACATGCAGCGGCTGACGGTCAAGCGTCAATGGGCGTGATGATATCCGGGCTGGCGCTAATGGGCTTTGCCGAACTCTTTATTGACCCGGTGGCGATTGCGCAAATCACGCGTCTGAAAATGTCTGGCGTATTAACCGGGATTTATATGCTGGCAACAGGCGCGGTCGCCAACTGGCTGGCAGGCGTCGTGGCACAGCAGACGACAGAGTCGCAAATTAGCGGTATGGCAATTGCAGCTTACCAGCGATTCTTTTCTCAGATGGGAGAGTGGACGTTGGCTTGTGTCGCGATCATCGTCGTATTGGCCTTTGCTACCCGTTTTCTGTTTAGCACGCCGACGAATATGATACAGGAGAGCAACGATTAA", 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"gene_synonym", - "ldcI" - ], - [ - "gene_synonym", - "b4131" - ], - [ - "gene_synonym", - "ECK4125" - ], - [ - "gene_synonym", - "GeneID:948643" - ], - [ - "gene_synonym", - "cadA" - ], - [ - "gene_synonym", - "ASAP:ABE-0013526" - ], - [ - "gene_synonym", - "GI:16131957" - ], - [ - "gene_synonym", - "JW4092" - ], - [ - "gene_synonym", - "EcoGene:EG10131" - ] - ], - "dna_sequence": "ATGAACGTTATTGCAATATTGAATCACATGGGGGTTTATTTTAAAGAAGAACCCATCCGTGAACTTCATCGCGCGCTTGAACGTCTGAACTTCCAGATTGTTTACCCGAACGACCGTGACGACTTATTAAAACTGATCGAAAACAATGCGCGTCTGTGCGGCGTTATTTTTGACTGGGATAAATATAATCTCGAGCTGTGCGAAGAAATTAGCAAAATGAACGAGAACCTGCCGTTGTACGCGTTCGCTAATACGTATTCCACTCTCGATGTAAGCCTGAATGACCTGCGTTTACAGATTAGCTTCTTTGAATATGCGCTGGGTGCTGCTGAAGATATTGCTAATAAGATCAAGCAGACCACTGACGAATATATCAACACTATTCTGCCTCCGCTGACTAAAGCACTGTTTAAATATGTTCGTGAAGGTAAATATACTTTCTGTACTCCTGGTCACATGGGCGGTACTGCATTCCAGAAAAGCCCGGTAGGTAGCCTGTTCTATGATTTCTTTGGTCCGAATACCATGAAATCTGATATTTCCATTTCAGTATCTGAACTGGGTTCTCTGCTGGATCACAGTGGTCCACACAAAGAAGCAGAACAGTATATCGCTCGCGTCTTTAACGCAGACCGCAGCTACATGGTGACCAACGGTACTTCCACTGCGAACAAAATTGTTGGTATGTACTCTGCTCCAGCAGGCAGCACCATTCTGATTGACCGTAACTGCCACAAATCGCTGACCCACCTGATGATGATGAGCGATGTTACGCCAATCTATTTCCGCCCGACCCGTAACGCTTACGGTATTCTTGGTGGTATCCCACAGAGTGAATTCCAGCACGCTACCATTGCTAAGCGCGTGAAAGAAACACCAAACGCAACCTGGCCGGTACATGCTGTAATTACCAACTCTACCTATGATGGTCTGCTGTACAACACCGACTTCATCAAGAAAACACTGGATGTGAAATCCATCCACTTTGACTCCGCGTGGGTGCCTTACACCAACTTCTCACCGATTTACGAAGGTAAATGCGGTATGAGCGGTGGCCGTGTAGAAGGGAAAGTGATTTACGAAACCCAGTCCACTCACAAACTGCTGGCGGCGTTCTCTCAGGCTTCCATGATCCACGTTAAAGGTGACGTAAACGAAGAAACCTTTAACGAAGCCTACATGATGCACACCACCACTTCTCCGCACTACGGTATCGTGGCGTCCACTGAAACCGCTGCGGCGATGATGAAAGGCAATGCAGGTAAGCGTCTGATCAACGGTTCTATTGAACGTGCGATCAAATTCCGTAAAGAGATCAAACGTCTGAGAACGGAATCTGATGGCTGGTTCTTTGATGTATGGCAGCCGGATCATATCGATACGACTGAATGCTGGCCGCTGCGTTCTGACAGCACCTGGCACGGCTTCAAAAACATCGATAACGAGCACATGTATCTTGACCCGATCAAAGTCACCCTGCTGACTCCGGGGATGGAAAAAGACGGCACCATGAGCGACTTTGGTATTCCGGCCAGCATCGTGGCGAAATACCTCGACGAACATGGCATCGTTGTTGAGAAAACCGGTCCGTATAACCTGCTGTTCCTGTTCAGCATCGGTATCGATAAGACCAAAGCACTGAGCCTGCTGCGTGCTCTGACTGACTTTAAACGTGCGTTCGACCTGAACCTGCGTGTGAAAAACATGCTGCCGTCTCTGTATCGTGAAGATCCTGAATTCTATGAAAACATGCGTATTCAGGAACTGGCTCAGAATATCCACAAACTGATTGTTCACCACAATCTGCCGGATCTGATGTATCGCGCATTTGAAGTGCTGCCGACGATGGTAATGACTCCGTATGCTGCATTCCAGAAAGAGCTGCACGGTATGACCGAAGAAGTTTACCTCGACGAAATGGTAGGTCGTATTAACGCCAATATGATCCTTCCGTACCCGCCGGGAGTTCCTCTGGTAATGCCGGGTGAAATGATCACCGAAGAAAGCCGTCCGGTTCTGGAGTTCCTGCAGATGCTGTGTGAAATCGGCGCTCACTATCCGGGCTTTGAAACCGATATTCACGGTGCATACCGTCAGGCTGATGGCCGCTATACCGTTAAGGTATTGAAAGAAGAAAGCAAAAAATAA", 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"MNVIAILNHMGVYFKEEPIRELHRALERLNFQIVYPNDRDDLLKLIENNARLCGVIFDWDKYNLELCEEISKMNENLPLYAFANTYSTLDVSLNDLRLQISFFEYALGAAEDIANKIKQTTDEYINTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSLFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRAFDLNLRVKNMLPSLYREDPEFYENMRIQELAQNIHKLIVHHNLPDLMYRAFEVLPTMVMTPYAAFQKELHGMTEEVYLDEMVGRINANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKEESKK", - "protein_translation_length": 715, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4132" - ], - [ - "gene_synonym", - "EcoGene:EG10132" - ], - [ - "gene_synonym", - "ECK4126" - ], - [ - "gene_synonym", - "ASAP:ABE-0013530" - ], - [ - "gene_synonym", - "GeneID:948654" - ], - [ - "gene_synonym", - "cadB" - ], - [ - "gene_synonym", - "NP_418556.1" - ], - [ - "gene_synonym", - "GI:16131958" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAE8" - ], - [ - "gene_synonym", - "JW4093" - ] - ], - "dna_sequence": "ATGAGTTCTGCCAAGAAGATCGGGCTATTTGCCTGTACCGGTGTTGTTGCCGGTAATATGATGGGGAGCGGTATTGCATTATTACCTGCGAACCTAGCAAGTATCGGTGGTATTGCTATCTGGGGTTGGATTATCTCTATTATTGGTGCAATGTCGCTGGCGTATGTATATGCCCGACTGGCAACAAAAAACCCGCAACAAGGTGGCCCAATTGCTTATGCCGGAGAAATTTCCCCTGCATTTGGTTTTCAGACAGGTGTTCTTTATTACCATGCTAACTGGATTGGTAACCTGGCGATTGGTATTACCGCTGTATCTTATCTTTCCACCTTCTTCCCAGTATTAAATGATCCTGTTCCGGCGGGTATCGCCTGTATTGCTATCGTCTGGGTATTTACCTTTGTAAATATGCTCGGCGGTACTTGGGTAAGCCGTTTAACCACTATTGGTCTGGTGCTGGTTCTTATTCCTGTGGTGATGACTGCTATTGTTGGCTGGCATTGGTTTGATGCGGCAACTTATGCAGCTAACTGGAATACTGCGGATACCACTGATGGTCATGCGATCATTAAAAGTATTCTGCTCTGCCTGTGGGCCTTCGTGGGTGTTGAATCCGCAGCTGTAAGTACTGGTATGGTTAAAAACCCGAAACGTACCGTTCCGCTGGCAACCATGCTGGGTACTGGTTTAGCAGGTATTGTTTACATCGCTGCGACTCAGGTGCTTTCCGGTATGTATCCGTCTTCTGTAATGGCGGCTTCCGGTGCTCCGTTTGCAATCAGTGCTTCAACTATCCTCGGTAACTGGGCTGCGCCGCTGGTTTCTGCATTCACCGCCTTTGCGTGCCTGACTTCTCTGGGCTCCTGGATGATGTTGGTAGGCCAGGCAGGTGTACGTGCCGCTAACGACGGTAACTTCCCGAAAGTTTATGGTGAAGTCGACAGCAACGGTATTCCGAAAAAAGGTCTGCTGCTGGCTGCAGTGAAAATGACTGCCCTGATGATCCTTATCACTCTGATGAACTCTGCCGGTGGTAAAGCATCTGACCTGTTCGGTGAACTGACCGGTATCGCAGTACTGCTGACTATGCTGCCGTATTTCTACTCTTGCGTTGACCTGATTCGTTTTGAAGGCGTTAACATCCGCAACTTTGTCAGCCTGATCTGCTCTGTACTGGGTTGCGTGTTCTGCTTCATCGCGCTGATGGGCGCAAGCTCCTTCGAGCTGGCAGGTACCTTCATCGTCAGCCTGATTATCCTGATGTTCTACGCTCGCAAAATGCACGAGCGCCAGAGCCACTCAATGGATAACCACACCGCGTCTAACGCACATTAA", - "dna_sequence_length": 1335, - "functions": [ - "putative lysine/cadaverine transporter" - ], - "id": "CDS_4051", - "location": [ - [ - "NC_000913", - 4360031, - "-", - 1335 - ] - ], - "md5": "43090406da5ccdd9b3d96c1ffffe3587", - "parent_gene": "", - "protein_md5": "2570cb8316ae4b95c2b5d701a994e9e2", - "protein_translation": "MSSAKKIGLFACTGVVAGNMMGSGIALLPANLASIGGIAIWGWIISIIGAMSLAYVYARLATKNPQQGGPIAYAGEISPAFGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLNDPVPAGIACIAIVWVFTFVNMLGGTWVSRLTTIGLVLVLIPVVMTAIVGWHWFDAATYAANWNTADTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIVYIAATQVLSGMYPSSVMAASGAPFAISASTILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKVYGEVDSNGIPKKGLLLAAVKMTALMILITLMNSAGGKASDLFGELTGIAVLLTMLPYFYSCVDLIRFEGVNIRNFVSLICSVLGCVFCFIALMGASSFELAGTFIVSLIILMFYARKMHERQSHSMDNHTASNAH", - "protein_translation_length": 444, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4127" - ], - [ - "gene_synonym", - "EcoGene:EG10133" - ], - [ - "gene_synonym", - "NP_418557.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013532" - ], - [ - "gene_synonym", - "cadC" - ], - [ - "gene_synonym", - "GI:16131959" - ], - [ - "gene_synonym", - "GeneID:948653" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23890" - ], - [ - "gene_synonym", - "JW4094" - ], - [ - "gene_synonym", - "b4133" - ] - ], - "dna_sequence": "ATGCAACAACCTGTAGTTCGCGTTGGCGAATGGCTTGTTACTCCGTCCATAAACCAAATTAGCCGCAATGGGCGTCAACTTACCCTTGAGCCGAGATTAATCGATCTTCTGGTTTTCTTTGCTCAACACAGTGGCGAAGTACTTAGCAGGGATGAACTTATCGATAATGTCTGGAAGAGAAGTATTGTCACCAATCACGTTGTGACGCAGAGTATCTCAGAACTACGTAAGTCATTAAAAGATAATGATGAAGATAGTCCTGTCTATATCGCTACTGTACCAAAGCGCGGCTATAAATTAATGGTGCCGGTTATCTGGTACAGCGAAGAAGAGGGAGAGGAAATAATGCTATCTTCGCCTCCCCCTATACCAGAGGCGGTTCCTGCCACAGATTCTCCCTCCCACAGTCTTAACATTCAAAACACCGCAACGCCACCTGAACAATCCCCAGTTAAAAGCAAACGATTCACTACCTTTTGGGTATGGTTTTTTTTCCTGTTGTCGTTAGGTATCTGTGTAGCACTGGTAGCGTTTTCAAGTCTTGATACACGTCTTCCTATGAGCAAATCGCGTATTTTGCTCAATCCACGCGATATTGACATTAATATGGTAAATAAAAGTTGTAACAGCTGGAGTTCCCCGTATCAGCTCTCTTACGCGATAGGCGTGGGTGATTTGGTGGCGACATCACTTAACACCTTCTCCACCTTTATGGTGCATGACAAAATCAACTACAACATTGATGAACCGAGCAGTTCCGGTAAAACATTATCTATTGCGTTTGTTAATCAGCGCCAATACCGTGCTCAACAATGCTTTATGTCGATAAAATTGGTAGACAATGCAGATGGTTCAACCATGCTGGATAAACGTTATGTCATCACTAACGGTAATCAGCTGGCGATTCAAAATGATTTACTGGAGAGTTTATCAAAAGCGTTAAACCAACCGTGGCCACAACGAATGCAGGAGACGCTCCAGAAAATTTTGCCGCATCGTGGTGCGTTATTAACTAATTTTTATCAGGCACATGATTATTTACTGCATGGCGATGATAAATCATTGAACCGTGCCAGTGAATTATTAGGTGAGATTGTTCAATCATCCCCAGAATTTACCTACGCGAGAGCAGAAAAAGCATTAGTTGATATCGTGCGCCATTCTCAACATCCTTTAGATGAAAAACAATTAGCAGCACTGAACACAGAAATAGATAACATTGTTACACTGCCGGAATTGAACAACCTGTCCATTATATATCAAATAAAAGCGGTCAGTGCTCTGGTAAAAGGTAAAACAGATGAGTCTTACCAGGCGATAAATACTGGCATTGATCTTGAAATGTCCTGGCTAAATTATGTGTTGCTTGGCAAGGTTTATGAAATGAAGGGGATGAACCGGGAAGCAGCTGATGCATATCTCACCGCCTTTAATTTACGCCCAGGGGCAAACACCCTTTACTGGATTGAAAATGGTATATTCCAGACTTCTGTTCCTTATGTTGTACCTTATCTCGACAAATTTCTTGCTTCAGAATAA", - "dna_sequence_length": 1539, - "functions": [ - "cadBA operon transcriptional activator" - ], - "id": "CDS_4052", - "location": [ - [ - "NC_000913", - 4361934, - "-", - 1539 - ] - ], - "md5": "fc53015879af2da76284e20957e060d4", - "parent_gene": "", - "protein_md5": "7f1b90f0b7284853cc73fd05d36b37b4", - "protein_translation": "MQQPVVRVGEWLVTPSINQISRNGRQLTLEPRLIDLLVFFAQHSGEVLSRDELIDNVWKRSIVTNHVVTQSISELRKSLKDNDEDSPVYIATVPKRGYKLMVPVIWYSEEEGEEIMLSSPPPIPEAVPATDSPSHSLNIQNTATPPEQSPVKSKRFTTFWVWFFFLLSLGICVALVAFSSLDTRLPMSKSRILLNPRDIDINMVNKSCNSWSSPYQLSYAIGVGDLVATSLNTFSTFMVHDKINYNIDEPSSSGKTLSIAFVNQRQYRAQQCFMSIKLVDNADGSTMLDKRYVITNGNQLAIQNDLLESLSKALNQPWPQRMQETLQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIENGIFQTSVPYVVPYLDKFLASE", - "protein_translation_length": 512, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjdQ" - ], - [ - "gene_synonym", - "ECK4457" - ], - [ - "gene_synonym", - "GeneID:5625580" - ], - [ - "gene_synonym", - "EcoGene:EG14452" - ], - [ - "gene_synonym", - "b4654" - ] - ], - "dna_sequence": "CGTGATGCTGTTGAACGTCAAATGACGTCATCAGGAGCGTAACGCATCCATAAAGCACAACACCGGTCTGAACGGCGACTGATGTGAGATTTTCTGAATGAGAACAAAGAGAAATGTATCAGTTCGCTTGCTCATGCAAAGACTAACAATCCATTAAAATAGTAA", - "dna_sequence_length": 165, - "id": "CDS_4053", - "location": [ - [ - "NC_000913", - 4362353, - "-", - 84 - ], - [ - "NC_000913", - 4362271, - "-", - 81 - ] - ], - "md5": "e2c3112dcd5afd34e38631c95adffcc2", - "parent_gene": "", - "protein_md5": "8fdf942b2d01f2162de47e34fcae5f86", - "protein_translation": "RDAVERQMTSSGA", - "protein_translation_length": 13, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4135" - ], - [ - "gene_synonym", - "EcoGene:EG12176" - ], - [ - "gene_synonym", - "GI:90111689" - ], - [ - "gene_synonym", - "ECK4129" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACU7" - ], - [ - "gene_synonym", - "NP_418558.2" - ], - [ - "gene_synonym", - "yjdC" - ], - [ - "gene_synonym", - "cutA3" - ], - [ - "gene_synonym", - "ASAP:ABE-0013537" - ], - [ - "gene_synonym", - "JW5733" - ], - [ - "gene_synonym", - "GeneID:948650" - ] - ], - "dna_sequence": "GTGCAACGTGAAGATGTACTGGGAGAAGCCCTGAAATTATTAGAATTACAAGGGATTGCCAACACCACGCTGGAGATGGTTGCTGAACGTGTGGATTATCCACTGGACGAGCTACGCCGCTTCTGGCCAGACAAAGAGGCAATCCTCTACGATGCGCTGCGTTATCTTAGCCAACAGATAGATGTCTGGCGTCGTCAGCTGATGCTGGACGAAACGCAAACCGCCGAACAAAAGCTGCTGGCACGTTATCAGGCGTTATCGGAGTGCGTTAAAAACAACCGCTATCCGGGCTGTCTATTTATCGCTGCCTGTACGTTTTATCCCGATCCTGGCCACCCTATTCATCAACTGGCCGATCAGCAAAAAAGCGCGGCCTACGATTTCACCCACGAACTGTTAACCACACTGGAAGTTGACGATCCGGCGATGGTAGCAAAGCAGATGGAACTGGTGCTGGAAGGCTGTTTAAGCCGAATGCTGGTGAATCGTAGCCAGGCGGATGTCGACACTGCACATCGGCTGGCGGAAGATATCCTGCGCTTCGCCCGCTGCCGCCAGGGTGGTGCATTGACCTGA", - "dna_sequence_length": 576, - "functions": [ - "putative transcriptional regulator" - ], - "id": "CDS_4054", - "location": [ - [ - "NC_000913", - 4363308, - "-", - 576 - ] - ], - "md5": "68d569f2f2f3f8994b919cebc5e9c232", - "parent_gene": "", - "protein_md5": "7a4da0ad506c78dfcb5fee428295a804", - "protein_translation": "MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPDKEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKLLARYQALSECVKNNRYPGCLFIAACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRMLVNRSQADVDTAHRLAEDILRFARCRQGGALT", - "protein_translation_length": 191, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4130" - ], - [ - "gene_synonym", - "b4136" - ], - [ - "gene_synonym", - "dipZ" - ], - [ - "gene_synonym", - "EcoGene:EG12178" - ], - [ - "gene_synonym", - "cycZ" - ], - [ - "gene_synonym", - "htrI" - ], - [ - "gene_synonym", - "cutA2" - ], - [ - "gene_synonym", - "ASAP:ABE-0013539" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36655" - ], - [ - "gene_synonym", - "GI:16131961" - ], - [ - "gene_synonym", - "GeneID:948649" - ], - [ - "gene_synonym", - "dsbD" - ], - [ - "gene_synonym", - "JW5734" - ], - [ - "gene_synonym", - "NP_418559.1" - ] - ], - "dna_sequence": "ATGGCTCAACGCATCTTTACGCTGATCCTGCTACTTTGCAGCACTTCCGTTTTTGCCGGATTATTCGACGCGCCGGGACGTTCACAATTTGTCCCCGCGGATCAAGCCTTTGCTTTTGATTTTCAGCAAAACCAACATGACCTTAATCTGACCTGGCAGATCAAAGACGGTTACTACCTCTACCGTAAACAGATCCGCATTACGCCGGAACACGCGAAAATTGCCGACGTGCAGCTGCCGCAAGGCGTCTGGCATGAAGATGAGTTTTACGGCAAAAGCGAGATTTACCGCGATCGGCTGACGCTTCCCGTCACCATCAACCAGGCGAGTGCGGGAGCGACGTTAACTGTCACCTACCAGGGCTGTGCTGATGCCGGTTTCTGTTATCCGCCAGAAACCAAAACCGTTCCGTTAAGCGAAGTGGTCGCCAACAACGCAGCGCCACAGCCTGTGTCTGTTCCGCAGCAAGAGCAGCCCACCGCGCAATTGCCCTTTTCCGCGCTCTGGGCGTTGTTGATCGGTATTGGTATCGCCTTTACGCCATGCGTGCTGCCAATGTACCCACTGATTTCTGGCATCGTGCTGGGTGGTAAACAGCGGCTCTCCACTGCCAGAGCATTGTTGCTGACCTTTATTTATGTGCAGGGGATGGCGCTGACCTACACGGCGCTGGGTCTGGTGGTTGCCGCCGCAGGGTTACAGTTCCAGGCGGCGCTACAGCACCCATACGTGCTCATTGGCCTCGCCATCGTCTTTACCTTGCTGGCGATGTCAATGTTTGGCTTGTTTACCCTGCAACTCCCCTCTTCGCTGCAAACACGTCTCACGTTGATGAGCAATCGCCAACAGGGCGGCTCACCTGGCGGTGTGTTTGTTATGGGGGCGATTGCCGGACTGATCTGTTCACCATGCACCACCGCACCGCTTAGCGCGATTCTGCTGTATATCGCCCAAAGCGGGAACATGTGGCTGGGCGGCGGCACGCTTTATCTCTATGCGTTGGGCATGGGCCTGCCGCTGATGCTAATTACCGTCTTTGGTAACCGCTTGCTGCCGAAAAGCGGCCCGTGGATGGAACAAGTCAAAACCGCGTTTGGTTTTGTGATCCTCGCACTGCCGGTCTTCCTGCTGGAGCGAGTGATTGGTGATGTATGGGGATTACGCTTGTGGTCGGCGCTGGGTGTCGCATTCTTTGGCTGGGCCTTTATCACCAGCCTACAGGCTAAACGCGGCTGGATGCGTATTGTGCAAATTATTCTGCTGGCAGCGGCATTGGTTAGCGTGCGCCCACTTCAGGATTGGGCATTTGGTGCGACGCATACCGCGCAAACTCAGACGCATCTCAACTTTACACAAATCAAAACGGTAGATGAGTTAAATCAGGCGCTCGTTGAAGCCAAAGGCAAACCGGTGATGTTAGATCTTTATGCCGACTGGTGCGTCGCCTGTAAAGAGTTTGAGAAATACACCTTCAGCGACCCGCAGGTGCAAAAAGCGTTAGCAGACACGGTCTTACTTCAGGCCAACGTCACGGCCAACGACGCACAAGATGTGGCGCTGTTAAAGCATCTTAATGTCCTTGGCCTACCGACAATTCTCTTTTTTGACGGACAAGGCCAGGAGCATCCACAAGCACGCGTCACGGGCTTTATGGATGCTGAAACCTTCAGCGCACATTTGCGCGATCGCCAACCGTGA", 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"gene_synonym", - "b4137" - ], - [ - "gene_synonym", - "ECK4131" - ], - [ - "gene_synonym", - "NP_418560.1" - ], - [ - "gene_synonym", - "cycY" - ], - [ - "gene_synonym", - "cutA" - ], - [ - "gene_synonym", - "ASAP:ABE-0013544" - ], - [ - "gene_synonym", - "EcoGene:EG12177" - ], - [ - "gene_synonym", - "GeneID:948660" - ], - [ - "gene_synonym", - "cutA1" - ], - [ - "gene_synonym", - "GI:16131962" - ], - [ - "gene_synonym", - "JW4097" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69488" - ] - ], - "dna_sequence": "ATGCTTGATGAAAAAAGTTCGAATACCGCGTCTGTCGTGGTGCTATGTACGGCACCAGATGAAGCGACAGCCCAGGATTTAGCCGCCAAAGTGCTGGCGGAAAAACTGGCGGCCTGCGCGACCTTGATCCCCGGCGCTACCTCTCTCTATTACTGGGAAGGTAAGCTGGAGCAAGAATACGAAGTGCAGATGATTTTAAAAACTACCGTATCTCACCAGCAGGCACTGCTGGAATGCCTGAAGTCTCATCATCCATATCAAACCCCGGAACTTCTGGTTTTACCTGTTACACACGGAGACACAGATTACCTCTCATGGCTCAACGCATCTTTACGCTGA", - "dna_sequence_length": 339, - "functions": [ - "divalent-cation tolerance protein, copper sensitivity" - ], - "id": "CDS_4056", - "location": [ - [ - "NC_000913", - 4365356, - "-", - 339 - ] - ], - "md5": "2623b8670ccb7842066e21f5802b85ea", - "parent_gene": "", - "protein_md5": "9de8c859930b5dd0da696c9e2c30583b", - "protein_translation": "MLDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWLNASLR", - "protein_translation_length": 112, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4132" - ], - [ - "gene_synonym", - "GI:16131963" - ], - [ - "gene_synonym", - "EcoGene:EG11225" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABN5" - ], - [ - "gene_synonym", - "dcuA" - ], - [ - "gene_synonym", - "b4138" - ], - [ - "gene_synonym", - "ASAP:ABE-0013546" - ], - [ - "gene_synonym", - "genA" - ], - [ - "gene_synonym", - "GeneID:948659" - ], - [ - "gene_synonym", - "NP_418561.1" - ], - [ - "gene_synonym", - "JW5735" - ] - ], - "dna_sequence": "ATGCTAGTTGTAGAACTCATCATAGTTTTGCTGGCGATCTTCTTGGGCGCCAGATTGGGGGGAATAGGTATTGGTTTTGCAGGCGGATTGGGGGTGCTGGTTCTTGCCGCTATTGGCGTTAAACCCGGTAACATCCCGTTCGATGTCATCTCCATTATCATGGCGGTTATCGCCGCTATTTCTGCCATGCAGGTTGCTGGCGGTCTGGACTATCTGGTTCATCAGACAGAAAAGCTGCTGCGCCGTAACCCGAAATACATCACGATCCTCGCACCGATCGTGACCTATTTCCTGACTATCTTTGCTGGTACTGGCAACATCTCTCTGGCGACACTGCCAGTTATCGCTGAAGTTGCGAAGGAACAAGGCGTTAAACCTTGCCGTCCGCTGTCTACTGCAGTGGTATCCGCGCAGATTGCGATCACCGCATCGCCAATCTCAGCGGCAGTGGTTTACATGTCTTCCGTGATGGAAGGTCATGGCATCAGCTACCTCCATCTGCTCTCCGTGGTCATCCCGTCCACCCTGCTGGCGGTTCTGGTGATGTCCTTCCTGGTCACTATGCTGTTCAACTCCAAACTCTCTGACGATCCGATTTATCGCAAGCGTCTGGAAGAGGGCCTGGTTGAACTGCGCGGTGAAAAGCAGATTGAAATCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAGCCCAAGCATGGGTCTGGTTGAAAAACCGCTGATGAACACCACCAACGCAATCCTGATCATCATGCTCAGCGTTGCAACTCTGACCACCGTTATCTGTAAAGTCGATACCGACAACATCCTCAACTCCAGCACCTTCAAAGCAGGTATGAGCGCCTGTATTTGTATCCTGGGTGTTGCGTGGCTGGGCGATACTTTCGTTTCCAACAACATCGACTGGATCAAAGATACCGCTGGTGAAGTGATTCAGGGTCATCCGTGGCTGCTGGCCGTCATCTTCTTCTTTGCTTCTGCTCTGCTGTACTCTCAGGCTGCAACCGCAAAAGCACTGATGCCGATGGCTCTGGCACTGAACGTTTCACCGCTGACCGCTGTTGCTTCTTTCGCTGCGGTGTCTGGTCTGTTCATTCTGCCGACCTACCCGACGCTGGTTGCTGCGGTACAGATGGATGACACGGGTACTACCCGTATCGGTAAATTCGTCTTCAACCATCCGTTCTTCATCCCGGGTACTCTGGGTGTTGCCCTGGCCGTTTGCTTCGGCTTCGTGCTGGGTAGCTTCATGCTGTAA", 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"GI:90111690" - ], - [ - "gene_synonym", - "NP_418562.4" - ], - [ - "gene_synonym", - "b4139" - ], - [ - "gene_synonym", - "ASAP:ABE-0013551" - ], - [ - "gene_synonym", - "JW4099" - ], - [ - "gene_synonym", - "EcoGene:EG10095" - ], - [ - "gene_synonym", - "GeneID:948658" - ] - ], - "dna_sequence": "ATGTCAAACAACATTCGTATCGAAGAAGATCTGTTGGGTACCAGGGAAGTTCCAGCTGATGCCTACTATGGTGTTCACACTCTGAGAGCGATTGAAAACTTCTATATCAGCAACAACAAAATCAGTGATATTCCTGAATTTGTTCGCGGTATGGTAATGGTTAAAAAAGCCGCAGCTATGGCAAACAAAGAGCTGCAAACCATTCCTAAAAGTGTAGCGAATGCCATCATTGCCGCATGTGATGAAGTCCTGAACAACGGAAAATGCATGGATCAGTTCCCGGTAGACGTCTACCAGGGCGGCGCAGGTACTTCCGTAAACATGAACACCAACGAAGTGCTGGCCAATATCGGTCTGGAACTGATGGGTCACCAAAAAGGTGAATATCAGTACCTGAACCCGAACGACCATGTTAACAAATGTCAGTCCACTAACGACGCCTACCCGACCGGTTTCCGTATCGCAGTTTACTCTTCCCTGATTAAGCTGGTAGATGCGATTAACCAACTGCGTGAAGGCTTTGAACGTAAAGCTGTCGAATTCCAGGACATCCTGAAAATGGGTCGTACCCAGCTGCAGGACGCAGTACCGATGACCCTCGGTCAGGAATTCCGCGCTTTCAGCATCCTGCTGAAAGAAGAAGTGAAAAACATCCAACGTACCGCTGAACTGCTGCTGGAAGTTAACCTTGGTGCAACAGCAATCGGTACTGGTCTGAACACGCCGAAAGAGTACTCTCCGCTGGCAGTGAAAAAACTGGCTGAAGTTACTGGCTTCCCATGCGTACCGGCTGAAGACCTGATCGAAGCGACCTCTGACTGCGGCGCTTATGTTATGGTTCACGGCGCGCTGAAACGCCTGGCTGTGAAGATGTCCAAAATCTGTAACGACCTGCGCTTGCTCTCTTCAGGCCCACGTGCCGGCCTGAACGAGATCAACCTGCCGGAACTGCAGGCGGGCTCTTCCATCATGCCAGCTAAAGTAAACCCGGTTGTTCCGGAAGTGGTTAACCAGGTATGCTTCAAAGTCATCGGTAACGACACCACTGTTACCATGGCAGCAGAAGCAGGTCAGCTGCAGTTGAACGTTATGGAGCCGGTCATTGGCCAGGCCATGTTCGAATCCGTTCACATTCTGACCAACGCTTGCTACAACCTGCTGGAAAAATGCATTAACGGCATCACTGCTAACAAAGAAGTGTGCGAAGGTTACGTTTACAACTCTATCGGTATCGTTACTTACCTGAACCCGTTCATCGGTCACCACAACGGTGACATCGTGGGTAAAATCTGTGCCGAAACCGGTAAGAGTGTACGTGAAGTCGTTCTGGAACGCGGTCTGTTGACTGAAGCGGAACTTGACGATATTTTCTCCGTACAGAATCTGATGCACCCGGCTTACAAAGCAAAACGCTATACTGATGAAAGCGAACAGTAA", 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"EcoGene:EG12382" - ], - [ - "gene_synonym", - "ECK4134" - ], - [ - "gene_synonym", - "ASAP:ABE-0013557" - ], - [ - "gene_synonym", - "GI:90111691" - ], - [ - "gene_synonym", - "yjeG" - ], - [ - "gene_synonym", - "GeneID:948657" - ], - [ - "gene_synonym", - "b4140" - ], - [ - "gene_synonym", - "JW4100" - ], - [ - "gene_synonym", - "NP_418564.2" - ] - ], - "dna_sequence": "TTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAATCTTTATTCAGGTTGCCCATGTATTGGGGGTATTGCTGACCCTCGTGCTGGTTATATTCACGTCAGTTATCGGTATGTCACTGGTACGTAACCAGGGCTTTAAGAATTTCGTGCTGATGCAGCAAAAAATGGCGGCGGGTGAAAACCCAGCGGCGGAGATGATTAAAAGTGTTTCGCTGATCATTGCTGGTTTGCTGCTTTTATTACCGGGCTTTTTTACCGACTTCCTCGGTCTTCTACTTTTATTGCCGCCGGTGCAAAAGCATCTGACAGTGAAGTTGATGCCGCATTTGCGCTTTTCTCGCATGCCTGGCGGCGGTTTTAGCGCCGGGACCGGTGGCGGTAATACTTTTGATGGTGAGTACCAGCGAAAGGATGATGAGCGCGACCGCCTTGATCATAAAGACGATCGCCAGGATTAA", - "dna_sequence_length": 477, - "functions": [ - "suppressor of F exclusion of phage T7" - ], - "id": "CDS_4059", - "location": [ - [ - "NC_000913", - 4368664, - "+", - 477 - ] - ], - "md5": "67b5d5b6b3654532440ae1b5c541414a", - "parent_gene": "", - "protein_md5": "8dd7fa1ef4f311e5fccaae1be8efd683", - "protein_translation": "MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGMSLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLPPVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD", - "protein_translation_length": 158, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12470" - ], - [ - "gene_synonym", - "ECK4135" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39277" - ], - [ - "gene_synonym", - "ASAP:ABE-0013559" - ], - [ - "gene_synonym", - "NP_418565.1" - ], - [ - "gene_synonym", - "GeneID:948656" - ], - [ - "gene_synonym", - "yjeH" - ], - [ - "gene_synonym", - "b4141" - ], - [ - "gene_synonym", - "JW4101" - ], - [ - "gene_synonym", - "GI:16131966" - ] - ], - "dna_sequence": "ATGAGTGGACTCAAACAAGAACTGGGGCTGGCCCAGGGCATTGGCCTGCTATCGACGTCATTATTAGGCACTGGCGTGTTTGCCGTTCCTGCGTTAGCTGCGCTGGTAGCGGGCAATAACAGCCTGTGGGCGTGGCCCGTTTTGATTATCTTAGTGTTCCCGATTGCGATTGTGTTTGCGATTCTGGGTCGCCACTATCCCAGCGCAGGCGGCGTCGCGCACTTCGTCGGTATGGCGTTTGGTTCGCGGCTTGAGCGAGTCACCGGCTGGCTGTTTTTATCGGTCATTCCCGTGGGTTTGCCTGCCGCACTACAAATTGCCGCCGGGTTCGGCCAGGCGATGTTTGGCTGGCATAGCTGGCAACTGTTGTTGGCAGAACTCGGTACGCTGGCGCTGGTGTGGTATATCGGTACTCGCGGTGCCAGTTCCAGTGCTAATCTACAAACCGTTATTGCCGGACTTATCGTCGCGCTGATTGTCGCTATCTGGTGGGCGGGCGATATCAAACCTGCGAATATCCCCTTTCCGGCACCTGGTAATATCGAACTTACCGGGTTATTTGCTGCGTTATCAGTGATGTTCTGGTGTTTTGTCGGTCTGGAGGCATTTGCCCATCTCGCCTCGGAATTTAAAAATCCAGAGCGTGATTTTCCTCGTGCTTTGATGATTGGTCTGCTGCTGGCAGGATTAGTCTACTGGGGCTGTACGGTAGTCGTCTTACACTTCGACGCCTATGGTGAAAAAATGGCGGCGGCAGCATCGCTTCCAAAAATTGTAGTGCAGTTGTTCGGTGTAGGAGCGTTATGGATTGCCTGCGTGATTGGCTATCTGGCCTGCTTTGCCAGTCTCAACATTTATATACAGAGCTTCGCCCGCCTGGTCTGGTCGCAGGCGCAACATAATCCTGACCACTACCTGGCACGCCTCTCTTCTCGCCATATCCCGAATAATGCCCTCAATGCGGTGCTCGGCTGCTGTGTGGTGAGCACTTTGGTGATTCATGCTTTAGAGATCAATCTGGACGCTCTTATTATTTATGCCAATGGCATCTTTATTATGATTTATCTGTTATGCATGCTGGCAGGCTGTAAATTATTGCAAGGACGTTATCGACTACTGGCGGTGGTTGGCGGGCTGTTATGCGTTCTGTTACTGGCAATGGTCGGCTGGAAAAGTCTCTATGCGCTGATCATGCTGGCGGGGTTATGGCTGTTGCTGCCAAAACGAAAAACGCCGGAAAATGGCATAACCACATAA", - "dna_sequence_length": 1257, - "functions": [ - "putative transporter" - ], - "id": "CDS_4060", - "location": [ - [ - "NC_000913", - 4370412, - "-", - 1257 - ] - ], - "md5": "5e068c9ed77c21b13b37ada5a9db6fe6", - "parent_gene": "", - "protein_md5": "443338159b9dde7db20435418ba54934", - "protein_translation": "MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIMLAGLWLLLPKRKTPENGITT", - "protein_translation_length": 418, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013566" - ], - [ - "gene_synonym", - "ECK4136" - ], - [ - "gene_synonym", - "NP_418566.1" - ], - [ - "gene_synonym", - "EcoGene:EG10600" - ], - [ - "gene_synonym", - "GeneID:948655" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6F9" - ], - [ - "gene_synonym", - "b4142" - ], - [ - "gene_synonym", - "groES" - ], - [ - "gene_synonym", - "JW4102" - ], - [ - "gene_synonym", - "groS" - ], - [ - "gene_synonym", - "TabB" - ], - [ - "gene_synonym", - "mopB" - ], - [ - "gene_synonym", - "GI:16131967" - ] - ], - "dna_sequence": "ATGAATATTCGTCCATTGCATGATCGCGTGATCGTCAAGCGTAAAGAAGTTGAAACTAAATCTGCTGGCGGCATCGTTCTGACCGGCTCTGCAGCGGCTAAATCCACCCGCGGCGAAGTGCTGGCTGTCGGCAATGGCCGTATCCTTGAAAATGGCGAAGTGAAGCCGCTGGATGTGAAAGTTGGCGACATCGTTATTTTCAACGATGGCTACGGTGTGAAATCTGAGAAGATCGACAATGAAGAAGTGTTGATCATGTCCGAAAGCGACATTCTGGCAATTGTTGAAGCGTAA", - "dna_sequence_length": 294, - "functions": [ - "Cpn10 chaperonin GroES, small subunit of GroESL" - ], - "id": "CDS_4061", - "location": [ - [ - "NC_000913", - 4370688, - "+", - 294 - ] - ], - "md5": "f90c55dc44a2014d3ed8d5b8b76cd3e9", - "parent_gene": "", - "protein_md5": "14aed608b903e87469e861e7f4f44d91", - "protein_translation": "MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA", - "protein_translation_length": 97, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418567.1" - ], - [ - "gene_synonym", - "groL" - ], - [ - "gene_synonym", - "ECK4137" - ], - [ - "gene_synonym", - "groEL" - ], - [ - "gene_synonym", - "GeneID:948665" - ], - [ - "gene_synonym", - "GI:16131968" - ], - [ - "gene_synonym", - "EcoGene:EG10599" - ], - [ - "gene_synonym", - "b4143" - ], - [ - "gene_synonym", - "ASAP:ABE-0013568" - ], - [ - "gene_synonym", - "JW4103" - ], - [ - "gene_synonym", - "mopA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6F5" - ] - ], - "dna_sequence": "ATGGCAGCTAAAGACGTAAAATTCGGTAACGACGCTCGTGTGAAAATGCTGCGCGGCGTAAACGTACTGGCAGATGCAGTGAAAGTTACCCTCGGTCCAAAAGGCCGTAACGTAGTTCTGGATAAATCTTTCGGTGCACCGACCATCACCAAAGATGGTGTTTCCGTTGCTCGTGAAATCGAACTGGAAGACAAGTTCGAAAATATGGGTGCGCAGATGGTGAAAGAAGTTGCCTCTAAAGCAAACGACGCTGCAGGCGACGGTACCACCACTGCAACCGTACTGGCTCAGGCTATCATCACTGAAGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTATCGACAAAGCGGTTACCGCTGCAGTTGAAGAACTGAAAGCGCTGTCCGTACCATGCTCTGACTCTAAAGCGATTGCTCAGGTTGGTACCATCTCCGCTAACTCCGACGAAACCGTAGGTAAACTGATCGCTGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAAGAAAATCTCCAACATCCGCGAAATGCTGCCGGTTCTGGAAGCTGTTGCCAAAGCAGGCAAACCGCTGCTGATCATCGCTGAAGATGTAGAAGGCGAAGCGCTGGCAACTCTGGTTGTTAACACCATGCGTGGCATCGTGAAAGTCGCTGCGGTTAAAGCACCGGGCTTCGGCGATCGTCGTAAAGCTATGCTGCAGGATATCGCAACCCTGACTGGCGGTACCGTGATCTCTGAAGAGATCGGTATGGAGCTGGAAAAAGCAACCCTGGAAGACCTGGGTCAGGCTAAACGTGTTGTGATCAACAAAGACACCACCACTATCATCGATGGCGTGGGTGAAGAAGCTGCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTACGACCGTGAAAAACTGCAGGAACGCGTAGCGAAACTGGCAGGCGGCGTTGCAGTTATCAAAGTGGGTGCTGCTACCGAAGTTGAAATGAAAGAGAAAAAAGCACGCGTTGAAGATGCCCTGCACGCGACCCGTGCTGCGGTAGAAGAAGGCGTGGTTGCTGGTGGTGGTGTTGCGCTGATCCGCGTAGCGTCTAAACTGGCTGACCTGCGTGGTCAGAACGAAGACCAGAACGTGGGTATCAAAGTTGCACTGCGTGCAATGGAAGCTCCGCTGCGTCAGATCGTATTGAACTGCGGCGAAGAACCGTCTGTTGTTGCTAACACCGTTAAAGGCGGCGACGGCAACTACGGTTACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGCATGGGTGGCATGGGCGGCATGATGTAA", 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"NP_418568.2" - ], - [ - "gene_synonym", - "EcoGene:EG12471" - ], - [ - "gene_synonym", - "GI:90111692" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF70" - ], - [ - "gene_synonym", - "ECK4138" - ], - [ - "gene_synonym", - "GeneID:948664" - ], - [ - "gene_synonym", - "b4144" - ], - [ - "gene_synonym", - "JW5736" - ], - [ - "gene_synonym", - "ASAP:ABE-0013572" - ], - [ - "gene_synonym", - "yjeI" - ] - ], - "dna_sequence": "ATGCACGTAAAATACTTAGCAGGGATTGTCGGTGCCGCGCTACTGATGGCGGGTTGTAGCTCCAGCAACGAATTGAGTGCTGCCGGTCAGAGTGTACGCATTGTGGACGAGCAGCCAGGCGCAGAGTGCCAGCTGATTGGTACTGCGACAGGTAAGCAAAGCAACTGGCTTTCCGGGCAACACGGAGAAGAAGGCGGTTCTATGCGCGGCGCAGCAAACGATCTGCGCAACCAGGCGGCTGCAATGGGCGGTAACGTGATTTATGGCATCAGTAGCCCGTCGCAGGGAATGTTGTCCAGTTTTGTCCCGACGGATAGCCAGATTATCGGTCAGGTTTATAAGTGCCCGAACTGA", - "dna_sequence_length": 354, - "functions": [ - "DUF4156 family lipoprotein" - ], - "id": "CDS_4063", - "location": [ - [ - "NC_000913", - 4372809, - "+", - 354 - ] - ], - "md5": 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"ATGGCCATAAGCATCAAGGGTGTTAATACCGGTGTTATTCGCAAGAGTAATAATTTCATTGCACTGGCGCTGAAAATTAAAGAACCTCGCAATAAAGAATCGTTGTTCTTTATGTCTGTCATGGAACTGCGCGACCTGCTGATTGCGCTGGAAAGTCGTCTGCATCAAAAGCATAAACTGGATGCTGCTGCACACCTTCAGTATGAGCAAGCTCGCGATAAAGTCATTAAGAAAATGGCAGAAAACATCCCAGAAATTCTGGTTGATGAGCTTAAAAATGCCGATATTAATCGTCGGGTTAACACGCTGGAACTTACCGATAATCAAGGCGAAAATCTTACCTTCGTATTAACGCTACATGACGGTAGCAAATGTGAGTTAGTCGTCAATGAGTTGCAGATTGAAATGCTGGCGCGAGCAATCATTCATGCAATTAATAATGCGGAAATGCGTGAACTGGCATTACGTATTACCTCACTGTTAGATTTCCTGCCGTTATACGACGTTGACTGCCAGGACAATGGCAATCTGGAATATGACACCTATTCCCAACCGGAATGGAAACATAACTTGTTCGACCATTATCTGGCGGTGCTTTACCGCTTTAAAGATGAAAGTGGCAAAGAACAATTTAGCGGCGCAGTGGTGAAAACGCGTGAAGCAACGCCGGGTAAAGAAATAGAAGCGATCACTCGCCGAATGCTTGATTTCAGCCCACGACTGAAAAAACTCGCGGGTGTGCCATGTCAGGTCTATGTTCGCACCGTAGCGGCGAATAACGCCCAACCGCTAACCCAGGATCAATGCTTACGCGCGCTGCATCACTTACGTGTTCAATCCACCAGCAAAACTGCACCACAGGCGAAATAA", - "dna_sequence_length": 870, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_4064", - "location": [ - [ - "NC_000913", - 4374234, - "-", - 870 - ] - ], - "md5": "2e2371e3e879270a8b1f51d19c45998f", - "parent_gene": "", - "protein_md5": "3649205a63b972ca0709b327f57d9e2c", - "protein_translation": "MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELRDLLIALESRLHQKHKLDAAAHLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNTLELTDNQGENLTFVLTLHDGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSLLDFLPLYDVDCQDNGNLEYDTYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKTREATPGKEIEAITRRMLDFSPRLKKLAGVPCQVYVRTVAANNAQPLTQDQCLRALHHLRVQSTSKTAPQAK", - "protein_translation_length": 289, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12473" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39280" - ], - [ - "gene_synonym", - "NP_418570.1" - ], - [ - "gene_synonym", - "GeneID:948662" - ], - [ - "gene_synonym", - "b4146" - ], - [ - "gene_synonym", - "ASAP:ABE-0013580" - ], - [ - "gene_synonym", - "epmB" - ], - [ - "gene_synonym", - "ECK4140" - ], - [ - "gene_synonym", - "GI:16131971" - ], - [ - "gene_synonym", - "JW4106" - ], - [ - "gene_synonym", - "yjeK" - ] - ], - "dna_sequence": 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"gene_synonym", - "EcoGene:EG12099" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6N4" - ], - [ - "gene_synonym", - "ECK4141" - ], - [ - "gene_synonym", - "GI:16131972" - ], - [ - "gene_synonym", - "JW4107" - ] - ], - "dna_sequence": "ATGGCAACGTACTATAGCAACGATTTTCGTGCTGGTCTTAAAATCATGTTAGACGGCGAACCTTACGCGGTTGAAGCGAGTGAATTCGTAAAACCGGGTAAAGGCCAGGCATTTGCTCGCGTTAAACTGCGTCGTCTGCTGACCGGTACTCGCGTAGAAAAAACCTTCAAATCTACTGATTCCGCTGAAGGCGCTGATGTTGTCGATATGAACCTGACTTACCTGTACAACGACGGTGAGTTCTGGCACTTCATGAACAACGAAACTTTCGAGCAGCTGTCTGCTGATGCAAAAGCAATTGGTGACAACGCTAAATGGCTGCTGGATCAGGCAGAGTGTATCGTAACTCTGTGGAATGGTCAGCCGATCTCCGTTACTCCGCCGAACTTCGTTGAACTGGAAATCGTTGATACCGATCCGGGCCTGAAAGGTGATACCGCAGGTACTGGTGGCAAACCGGCTACCCTGTCTACTGGCGCTGTGGTTAAAGTTCCGCTGTTTGTACAAATCGGCGAAGTCATCAAAGTGGATACCCGCTCTGGTGAATACGTCTCTCGCGTGAAGTAA", - "dna_sequence_length": 567, - "functions": [ - "polyproline-specific translation elongation factor EF-P" - ], - "id": "CDS_4066", - "location": [ - [ - "NC_000913", - 4375699, - "+", - 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"ASAP:ABE-0047211" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADB7" - ] - ], - "dna_sequence": "ATGGTGAAGAAGACAATTGCAGCGATCTTTTCTGTTCTGGTGCTTTCAACAGTATTAACTGCCTGCAACACCACGCGTGGCGTTGGTGAAGACATTTCTGATGGCGGTAACGCGATTTCTGGCGCAGCAACGAAAGCGCAGCAATAA", - "dna_sequence_length": 147, - "functions": [ - "entericidin B membrane lipoprotein" - ], - "id": "CDS_4068", - "location": [ - [ - "NC_000913", - 4376553, - "+", - 147 - ] - ], - "md5": "5a7c40c6267d2009ba695e1aacd69142", - "parent_gene": "", - "protein_md5": "8e45ccea21f648f7711eaa8914e50a61", - "protein_translation": "MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAATKAQQ", - "protein_translation_length": 48, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11616" - ], - [ - "gene_synonym", - "GI:90111693" - ], - [ - "gene_synonym", - "sugE" - ], - [ - "gene_synonym", - "GeneID:948671" - ], - [ - "gene_synonym", - "JW5738" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69937" - ], - [ - "gene_synonym", - "ASAP:ABE-0013588" - ], - [ - "gene_synonym", - "NP_418572.4" - ], - [ - "gene_synonym", - "ECK4144" - ], - [ - "gene_synonym", - "b4148" - ] - ], - "dna_sequence": "ATGTCCTGGATTATCTTAGTTATTGCTGGTCTGCTGGAAGTGGTATGGGCCGTTGGCCTGAAATATACCCACGGCTTTAGTCGTTTGACGCCGAGTGTTATTACTGTGACGGCGATGATTGTCAGTATGGCGCTACTTGCCTGGGCGATGAAATCGTTACCAGTAGGGACGGCTTATGCCGTGTGGACGGGTATTGGCGCAGTCGGCGCGGCCATAACCGGCATTGTGCTGCTCGGTGAGTCCGCTAACCCGATGCGCCTGGCGAGTCTGGCGTTAATCGTATTGGGGATTATTGGTCTGAAACTCAGCACTCACTAA", - "dna_sequence_length": 318, - "functions": [ - "multidrug efflux system protein" - ], - "id": "CDS_4069", - "location": [ - [ - "NC_000913", - 4376875, - "+", - 318 - ] - ], - "md5": "e956e44763758fad920361e85519308b", - "parent_gene": "", - "protein_md5": "4c57b23ab62f3064487d3fd7f5504aa8", - "protein_translation": "MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKLSTH", - "protein_translation_length": 105, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12474" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A901" - ], - [ - "gene_synonym", - "ASAP:ABE-0013590" - ], - [ - "gene_synonym", - "GeneID:948670" - ], - [ - "gene_synonym", - "JW4110" - ], - [ - "gene_synonym", - "yjeL" - ], - [ - "gene_synonym", - "NP_418573.1" - ], - [ - "gene_synonym", - "ECK4145" - ], - [ - "gene_synonym", - "GI:16131974" - ], - [ - "gene_synonym", - "blc" - ], - [ - "gene_synonym", - "b4149" - ] - ], - "dna_sequence": "ATGCGCCTGCTCCCTCTCGTTGCCGCAGCGACAGCTGCATTTCTGGTCGTTGCCTGCAGTTCTCCTACGCCGCCGCGTGGCGTGACCGTAGTAAATAATTTCGACGCCAAACGTTATCTCGGTACCTGGTATGAGATTGCCCGTTTTGATCACCGCTTTGAACGTGGACTGGAAAAAGTCACCGCAACATACAGCCTGCGTGATGACGGCGGCCTGAATGTCATTAATAAAGGCTATAACCCTGACAGAGGAATGTGGCAGCAGAGTGAAGGGAAAGCGTACTTTACCGGCGCACCAACTCGCGCTGCGCTGAAAGTGTCATTCTTTGGTCCTTTCTATGGCGGTTATAACGTTATTGCACTCGATCGGGAATACCGCCATGCGCTGGTTTGCGGCCCGGACCGCGACTACCTGTGGATACTCTCCCGCACGCCAACCATTTCTGACGAAGTGAAACAGGAGATGCTGGCAGTCGCGACCCGGGAAGGGTTTGATGTCAGTAAATTTATTTGGGTACAGCAGCCTGGTAGTTAG", - "dna_sequence_length": 534, - "functions": [ - "outer membrane lipoprotein cell division and growth lipocalin" - ], - "id": "CDS_4070", - "location": [ - [ - "NC_000913", - 4377722, - "-", - 534 - ] - ], - "md5": "e52a1221f00eadec98de0944072d69e7", - "parent_gene": "", - "protein_md5": "37da452fa01d2c4364b959f431abd048", - "protein_translation": "MRLLPLVAAATAAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWYEIARFDHRFERGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQSEGKAYFTGAPTRAALKVSFFGPFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVATREGFDVSKFIWVQQPGS", - "protein_translation_length": 177, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418574.1" - ], - [ - "gene_synonym", - "EcoGene:EG10040" - ], - [ - "gene_synonym", - "GeneID:948669" - ], - [ - "gene_synonym", - "ampC" - ], - [ - "gene_synonym", - "ampA" - ], - [ - "gene_synonym", - "ASAP:ABE-0013592" - ], - [ - "gene_synonym", - "b4150" - ], - [ - "gene_synonym", - "JW4111" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00811" - ], - [ - "gene_synonym", - "GI:16131975" - ], - [ - "gene_synonym", - "ECK4146" - ] - ], - "dna_sequence": "ATGTTCAAAACGACGCTCTGCGCCTTATTAATTACCGCCTCTTGCTCCACATTTGCTGCCCCTCAACAAATCAACGATATTGTGCATCGCACAATTACCCCGCTTATAGAGCAACAAAAGATCCCGGGTATGGCGGTGGCGGTAATTTATCAGGGTAAACCTTATTACTTTACCTGGGGCTATGCGGACATCGCCAAAAAGCAGCCCGTCACACAGCAAACGTTGTTTGAGTTAGGTTCGGTCAGCAAAACATTTACTGGCGTGCTTGGTGGCGACGCTATTGCTCGAGGGGAAATCAAGTTAAGCGATCCCACAACAAAATACTGGCCTGAACTTACCGCTAAACAGTGGAATGGGATCACACTATTACATCTCGCAACCTACACTGCTGGCGGCCTGCCATTGCAGGTGCCGGATGAGGTGAAATCCTCAAGCGACTTGCTGCGCTTCTATCAAAACTGGCAGCCTGCATGGGCTCCAGGAACACAACGTCTGTATGCCAACTCCAGTATCGGTTTGTTCGGCGCACTGGCTGTGAAGCCGTCTGGTTTGAGTTTTGAGCAGGCGATGCAAACTCGTGTCTTCCAGCCACTCAAACTCAACCATACGTGGATTAATGTACCGCCCGCAGAAGAAAAGAATTACGCCTGGGGATATCGCGAAGGTAAGGCAGTGCATGTTTCGCCTGGGGCGTTAGATGCTGAAGCTTATGGTGTGAAGTCGACCATTGAAGATATGGCCCGCTGGGTGCAAAGCAATTTAAAACCCCTTGATATCAATGAGAAAACGCTTCAACAAGGGATACAACTGGCACAATCTCGCTACTGGCAAACCGGCGATATGTATCAGGGCCTGGGCTGGGAAATGCTGGACTGGCCGGTAAATCCTGACAGCATCATTAACGGCAGTGACAATAAAATTGCACTGGCAGCACGCCCCGTAAAAGCGATTACGCCCCCAACTCCTGCAGTACGCGCATCATGGGTACATAAAACAGGGGCGACCGGCGGATTTGGTAGCTATGTCGCGTTTATTCCAGAAAAAGAGCTGGGTATCGTGATGCTGGCAAACAAAAACTATCCCAATCCAGCGAGAGTCGACGCCGCCTGGCAGATTCTTAACGCTCTACAGTAA", 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"gene_synonym", - "NP_418575.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8Q3" - ], - [ - "gene_synonym", - "b4151" - ], - [ - "gene_synonym", - "JW4112" - ], - [ - "gene_synonym", - "GI:16131976" - ], - [ - "gene_synonym", - "ECK4147" - ] - ], - "dna_sequence": "ATGATTAATCCAAATCCAAAGCGTTCTGACGAACCGGTATTCTGGGGCCTCTTCGGGGCCGGTGGTATGTGGAGCGCCATCATTGCGCCGGTGATGATCCTGCTGGTGGGTATTCTGCTGCCACTGGGGTTGTTTCCGGGTGATGCGCTGAGCTACGAGCGCGTTCTGGCGTTCGCGCAGAGCTTCATTGGTCGCGTATTCCTGTTCCTGATGATCGTTCTGCCGCTGTGGTGTGGTTTACACCGTATGCACCACGCGATGCACGATCTGAAAATCCACGTACCTGCGGGCAAATGGGTTTTCTACGGTCTGGCTGCTATCCTGACAGTTGTCACGCTGATTGGTGTCGTTACAATCTAA", - "dna_sequence_length": 360, - "functions": [ - "fumarate reductase (anaerobic), membrane anchor subunit" - ], - "id": "CDS_4072", - "location": [ - [ - "NC_000913", - 4379366, - "-", - 360 - ] - ], - "md5": "b76a5f301abd1ab6fbf1ad36be473fcc", - "parent_gene": "", - "protein_md5": "b715da47d04f9735194c841a1b3d28d5", - "protein_translation": "MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGLFPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFYGLAAILTVVTLIGVVTI", - "protein_translation_length": 119, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948680" - ], - [ - "gene_synonym", - "ASAP:ABE-0013598" - ], - [ - "gene_synonym", - "EcoGene:EG10332" - ], - [ - "gene_synonym", - "frdC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8Q0" - ], - [ - "gene_synonym", - "ECK4148" - ], - [ - "gene_synonym", - "NP_418576.1" - ], - [ - "gene_synonym", - "b4152" - ], - [ - "gene_synonym", - "JW4113" - ], - [ - "gene_synonym", - "GI:16131977" - ] - ], - "dna_sequence": "ATGACGACTAAACGTAAACCGTATGTACGGCCAATGACGTCCACCTGGTGGAAAAAATTGCCGTTTTATCGCTTTTACATGCTGCGCGAAGGCACGGCGGTTCCGGCTGTGTGGTTCAGCATTGAACTGATTTTCGGGCTGTTTGCCCTGAAAAATGGCCCGGAAGCCTGGGCGGGATTCGTCGACTTTTTACAAAACCCGGTTATCGTGATCATTAACCTGATCACTCTGGCGGCAGCTCTGCTGCACACCAAAACCTGGTTTGAACTGGCACCGAAAGCGGCCAATATCATTGTAAAAGACGAAAAAATGGGACCAGAGCCAATTATCAAAAGTCTCTGGGCGGTAACTGTGGTTGCCACCATCGTAATCCTGTTTGTTGCCCTGTACTGGTAA", - "dna_sequence_length": 396, - "functions": [ - "fumarate reductase (anaerobic), membrane anchor subunit" - ], - "id": "CDS_4073", - "location": [ - [ - "NC_000913", - 4379772, - "-", - 396 - ] - ], - "md5": "fd03d7359b2ae78e1bbed280884d3a8d", - "parent_gene": "", - "protein_md5": "7fd9360c2b37e65328cd3f220502fd9b", - "protein_translation": "MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKSLWAVTVVATIVILFVALYW", - "protein_translation_length": 131, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013602" - ], - [ - "gene_synonym", - "GeneID:948666" - ], - [ - "gene_synonym", - "frdB" - ], - [ - "gene_synonym", - "EcoGene:EG10331" - ], - [ - "gene_synonym", - "ECK4149" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AC47" - ], - [ - "gene_synonym", - "GI:16131978" - ], - [ - "gene_synonym", - "b4153" - ], - [ - "gene_synonym", - "JW4114" - ], - [ - "gene_synonym", - "NP_418577.1" - ] - ], - "dna_sequence": "ATGGCTGAGATGAAAAACCTGAAAATTGAGGTGGTGCGCTATAACCCGGAAGTCGATACCGCACCGCATAGCGCATTCTATGAAGTGCCTTATGACGCAACTACCTCATTACTGGATGCGCTGGGCTACATCAAAGACAACCTGGCACCGGACCTGAGCTACCGCTGGTCCTGCCGTATGGCGATTTGTGGTTCCTGCGGCATGATGGTTAACAACGTGCCAAAACTGGCATGTAAAACCTTCCTGCGTGATTACACCGACGGTATGAAGGTTGAAGCGTTAGCTAACTTCCCGATTGAACGCGATCTGGTGGTCGATATGACCCACTTCATCGAAAGTCTGGAAGCGATCAAACCGTACATCATCGGCAACTCCCGCACCGCGGATCAGGGTACTAACATCCAGACCCCGGCGCAGATGGCGAAGTATCACCAGTTCTCCGGTTGCATCAACTGTGGTTTGTGCTACGCCGCGTGCCCGCAGTTTGGCCTGAACCCAGAGTTCATCGGTCCGGCTGCCATTACGCTGGCGCATCGTTATAACGAAGATAGCCGCGACCACGGTAAGAAGGAGCGTATGGCGCAGTTGAACAGCCAGAACGGCGTATGGAGCTGTACTTTCGTGGGCTACTGCTCCGAAGTCTGCCCGAAACACGTCGATCCGGCTGCGGCCATTCAGCAGGGCAAAGTAGAAAGTTCGAAAGACTTTCTTATCGCGACCCTGAAACCACGCTAA", - "dna_sequence_length": 735, - "functions": [ - "fumarate reductase (anaerobic), Fe-S subunit" - ], - "id": "CDS_4074", - "location": [ - [ - "NC_000913", - 4380517, - "-", - 735 - ] - ], - "md5": "3a709270b043d0c26a4014c31958c619", - "parent_gene": "", - "protein_md5": "052ebfac67626ca0f2c49ed489e6a56a", - "protein_translation": "MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIATLKPR", - "protein_translation_length": 244, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P00363" - ], - [ - "gene_synonym", - "ASAP:ABE-0013604" - ], - [ - "gene_synonym", - "ECK4150" - ], - [ - "gene_synonym", - "frdA" - ], - [ - "gene_synonym", - "EcoGene:EG10330" - ], - [ - "gene_synonym", - "GeneID:948667" - ], - [ - "gene_synonym", - "b4154" - ], - [ - "gene_synonym", - "GI:16131979" - ], - [ - "gene_synonym", - "NP_418578.1" - ], - [ - "gene_synonym", - "JW4115" - ] - ], - "dna_sequence": "GTGCAAACCTTTCAAGCCGATCTTGCCATTGTAGGCGCCGGTGGCGCGGGATTACGTGCTGCAATTGCTGCCGCGCAGGCAAATCCGAATGCAAAAATCGCACTAATCTCAAAAGTATACCCGATGCGTAGCCATACCGTTGCTGCAGAAGGGGGCTCCGCCGCTGTCGCGCAGGATCATGACAGCTTCGAATATCACTTTCACGATACAGTAGCGGGTGGCGACTGGTTGTGTGAGCAGGATGTCGTGGATTATTTCGTCCACCACTGCCCAACCGAAATGACCCAACTGGAACTGTGGGGATGCCCATGGAGCCGTCGCCCGGATGGTAGCGTCAACGTACGTCGCTTCGGCGGCATGAAAATCGAGCGCACCTGGTTCGCCGCCGATAAGACCGGCTTCCATATGCTGCACACGCTGTTCCAGACCTCTCTGCAATTCCCGCAGATCCAGCGTTTTGACGAACATTTCGTGCTGGATATTCTGGTTGATGATGGTCATGTTCGCGGCCTGGTAGCAATGAACATGATGGAAGGCACGCTGGTGCAGATCCGTGCTAACGCGGTCGTTATGGCTACTGGCGGTGCGGGTCGCGTTTATCGTTACAACACCAACGGCGGCATCGTTACCGGTGACGGTATGGGTATGGCGCTAAGCCACGGCGTTCCGCTGCGTGACATGGAATTCGTTCAGTATCACCCAACCGGTCTGCCAGGTTCCGGTATCCTGATGACCGAAGGTTGCCGCGGTGAAGGCGGTATTCTGGTCAACAAAAATGGCTACCGTTATCTGCAAGATTACGGCATGGGCCCGGAAACTCCGCTGGGCGAGCCGAAAAACAAATATATGGAACTGGGTCCACGCGACAAAGTCTCTCAGGCCTTCTGGCACGAATGGCGTAAAGGCAACACCATCTCCACGCCGCGTGGCGATGTGGTTTATCTCGACTTGCGTCACCTCGGCGAGAAAAAACTGCATGAACGTCTGCCGTTCATCTGCGAACTGGCGAAAGCGTACGTTGGCGTCGATCCGGTTAAAGAACCGATTCCGGTACGTCCGACCGCACACTACACCATGGGCGGTATCGAAACCGATCAGAACTGTGAAACCCGCATTAAAGGTCTGTTCGCCGTGGGTGAATGTTCCTCTGTTGGTCTGCACGGTGCAAACCGTCTGGGTTCTAACTCCCTGGCGGAACTGGTGGTCTTCGGCCGTCTGGCCGGTGAACAAGCGACAGAGCGTGCAGCAACTGCCGGTAATGGCAACGAAGCGGCAATTGAAGCGCAGGCAGCTGGCGTTGAACAACGTCTGAAAGATCTGGTTAACCAGGATGGCGGCGAAAACTGGGCGAAGATCCGCGACGAAATGGGCCTGGCTATGGAAGAAGGCTGCGGTATCTACCGTACGCCGGAACTGATGCAGAAAACCATCGACAAGCTGGCAGAGCTGCAGGAACGCTTCAAGCGCGTGCGCATCACCGACACTTCCAGCGTGTTCAACACCGACCTGCTCTACACCATTGAACTGGGCCACGGTCTGAACGTTGCTGAATGTATGGCGCACTCCGCAATGGCACGTAAAGAGTCCCGCGGCGCGCACCAGCGTCTGGACGAAGGTTGCACCGAGCGTGACGACGTCAACTTCCTCAAACACACCCTCGCCTTCCGCGATGCTGATGGCACGACTCGCCTGGAGTACAGCGACGTGAAGATTACTACGCTGCCGCCAGCTAAACGCGTTTACGGTGGCGAAGCGGATGCAGCCGATAAGGCGGAAGCAGCCAATAAGAAGGAGAAGGCGAATGGCTGA", 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- "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG11211" - ], - [ - "gene_synonym", - "GI:90111694" - ], - [ - "gene_synonym", - "ASAP:ABE-0013610" - ], - [ - "gene_synonym", - "genX" - ], - [ - "gene_synonym", - "ECK4151" - ], - [ - "gene_synonym", - "poxA" - ], - [ - "gene_synonym", - "b4155" - ], - [ - "gene_synonym", - "GeneID:948672" - ], - [ - "gene_synonym", - "NP_418579.2" - ], - [ - "gene_synonym", - "epmA" - ], - [ - "gene_synonym", - "yjeA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8N7" - ], - [ - "gene_synonym", - "JW4116" - ] - ], - "dna_sequence": "ATGAGCGAAACGGCATCCTGGCAGCCGAGCGCATCCATTCCTAACTTATTAAAACGCGCGGCGATTATGGCGGAGATCCGTCGTTTCTTTGCCGATCGTGGAGTGCTGGAGGTGGAGACGCCTTGTATGAGCCAGGCGACGGTAACCGATATTCATTTGGTCCCGTTTGAGACACGTTTCGTTGGCCCCGGGCATTCGCAGGGGATGAATCTCTGGTTAATGACCAGCCCGGAATACCATATGAAACGCCTGCTGGTTGCCGGTTGTGGGCCGGTATTCCAGCTGTGCCGCAGCTTCCGTAATGAAGAGATGGGGCGTTATCACAACCCTGAGTTCACTATGCTGGAGTGGTATCGACCGCACTATGATATGTACCGGTTGATGAACGAGGTGGACGATCTCTTACAACAGGTGCTGGACTGCCCGGCAGCAGAAAGCCTTTCTTATCAACAAGCTTTCTTGCGTTATCTGGAAATTGACCCGCTCTCTGCCGACAAAACGCAACTGCGGGAAGTCGCAGCGAAACTGGATTTGAGCAATGTTGCTGATACCGAAGAAGACCGCGACACGCTGCTACAATTGCTGTTTACCTTTGGCGTAGAGCCAAATATTGGCAAAGAAAAACCGACCTTTGTGTACCACTTTCCAGCCAGCCAGGCATCACTGGCGCAAATCAGTACCGAAGATCATCGGGTCGCTGAACGCTTTGAGGTTTATTATAAAGGTATTGAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCCTTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAA", - "dna_sequence_length": 978, - "functions": [ - "Elongation Factor P Lys34 lysyltransferase" - ], - "id": "CDS_4076", - "location": [ - [ - "NC_000913", - 4382643, - "+", - 978 - ] - ], - "md5": "805f0b0bc47f67ec6937d184cd43e511", - "parent_gene": "", - "protein_md5": "fe3f3fe9e9fd4a541905a78c2ba045f0", - "protein_translation": "MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEIDPLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA", - "protein_translation_length": 325, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39282" - ], - [ - "gene_synonym", - "GI:90111695" - ], - [ - "gene_synonym", - "ECK4152" - ], - [ - "gene_synonym", - "EcoGene:EG12475" - ], - [ - "gene_synonym", - "ASAP:ABE-0013613" - ], - [ - "gene_synonym", - "JW5739" - ], - [ - "gene_synonym", - "b4156" - ], - [ - "gene_synonym", - "NP_418580.2" - ], - [ - "gene_synonym", - "GeneID:948679" - ], - [ - "gene_synonym", - "yjeM" - ] - ], - "dna_sequence": "ATGCCTCACACGATAAAAAAGATGAGTCTGATAGGACTCATATTGATGATCTTTACTTCCGTATTTGGATTTGCCAATAGCCCATCGGCTTATTACTTAATGGGTTATAGTGCGATTCCCTTTTATATATTTTCTGCATTGTTATTCTTTATTCCATTCGCCTTAATGATGGCTGAAATGGGAGCTGCTTATCGCAAAGAAGAAGGCGGTATCTATTCCTGGATGAATAATAGTGTCGGACCACGTTTTGCCTTCATTGGTACGTTTATGTGGTTTTCCTCTTATATCATCTGGATGGTGAGTACCTCCGCGAAAGTTTGGGTACCGTTCTCAACATTCCTCTATGGTAGCGACATGACCCAGCACTGGCGTATTGCCGGACTGGAGCCTACGCAGGTGGTTGGTCTGCTGGCTGTGGCATGGATGATTCTGGTCACCGTCGTTGCTTCTAAGGGGATTAATAAAATTGCCCGCATTACTGCGGTGGGCGGTATTGCAGTAATGTGTCTGAATTTAGTATTGCTGTTAGTAAGCATTACTATTTTGTTATTAAATGGTGGGCATTTCGCGCAGGATATTAATTTCCTTGCATCACCGAACCCGGGTTATCAGTCCGGTCTGGCAATGCTATCGTTTGTGGTATTTGCCATTTTTGCCTATGGCGGAATTGAAGCGGTTGGTGGTCTGGTCGATAAAACGGAAAATCCAGAAAAGAACTTTGCCAAAGGTATTGTTTTTGCCGCTATTGTTATTTCAATCGGTTATTCGCTGGCAATATTTTTATGGGGCGTCAGCACAAACTGGCAGCAGGTATTAAGTAATGGTTCCGTTAACCTCGGCAATATTACCTATGTGCTGATGAAGAGCCTTGGGATGACGCTGGGTAATGCACTGCATTTGTCACCTGAAGCGTCATTGTCGCTGGGCGTATGGTTTGCGCGTATTACTGGACTTTCGATGTTCCTCGCCTATACCGGTGCGTTCTTTACGCTTTGCTATTCACCGTTGAAAGCCATCATCCAGGGGACGCCGAAAGCATTGTGGCCGGAACCGATGACGCGCCTGAATGCGATGGGGATGCCGTCTATCGCCATGTGGATGCAGTGCGGGTTGGTTACTGTCTTCATCCTGCTGGTTTCGTTTGGTGGCGGTACCGCATCGGCGTTCTTTAACAAGCTGACGCTGATGGCGAACGTGTCTATGACGCTTCCTTACCTGTTCCTCGCGCTGGCTTTCCCGTTCTTTAAAGCACGTCAGGATCTCGACAGACCGTTTGTGATTTTCAAAACGCATTTGTCGGCAATGATTGCGACAGTGGTTGTCGTACTGGTGGTGACATTTGCGAACGTCTTCACCATCATTCAACCTGTGGTTGAAGCCGGAGACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAA", 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[ - "gene_synonym", - "ECK4153" - ], - [ - "gene_synonym", - "NP_418581.1" - ], - [ - "gene_synonym", - "JW4118" - ], - [ - "gene_synonym", - "b4157" - ], - [ - "gene_synonym", - "GI:16131982" - ], - [ - "gene_synonym", - "yjeN" - ], - [ - "gene_synonym", - "GeneID:948678" - ], - [ - "gene_synonym", - "EcoGene:EG12476" - ] - ], - "dna_sequence": "ATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGATGCCTGCCACACCCGTAAAGTGGCGATGGTGGTGGGTAGCACCATTAACACCCTCAAAGATCGCGATGGTAAACGGTGGGGAAACCTGCCGGATATTTATTGCGCTTATCTTATCCGATGTCTGGTTTTTCGCGGGGAATTAGTGGGATACGGCGATTTGTTTCGTATGCGCTATAGCGAAATTAAGCGACCGGTTACCTTATGA", - "dna_sequence_length": 315, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_4078", - "location": [ - [ - "NC_000913", - 4385393, - "+", - 315 - ] - ], - "md5": "d753dabf861da0a0e3fd4c7ff379e7d1", - "parent_gene": "", - "protein_md5": "a20ac7bdc3bd8d10fdca19a53866c7b4", - "protein_translation": "MDDTSRDPAITEDEIRALQFSAGDVAEIEQTILSFVDACHTRKVAMVVGSTINTLKDRDGKRWGNLPDIYCAYLIRCLVFRGELVGYGDLFRMRYSEIKRPVTL", - "protein_translation_length": 104, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4154" - ], - [ - "gene_synonym", - "EcoGene:EG12477" - ], - [ - "gene_synonym", - "NP_418582.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39284" - ], - [ - "gene_synonym", - "ASAP:ABE-0013619" - ], - [ - "gene_synonym", - "JW4119" - ], - [ - "gene_synonym", - "GeneID:948677" - ], - [ - "gene_synonym", - "GI:16131983" - ], - [ - "gene_synonym", - "yjeO" - ], - [ - "gene_synonym", - "b4158" - ] - ], - "dna_sequence": "ATGAGTGCGCGCATGTTTGTCTTATGCTGCATCTGGTTTATTGTGGCGTTCCTCTGGATAACCATCACTTCCGCGCTGGACAAAGAGTGGATGATTGATGGACGCGGGATTAACAACGTCTGCGATGTGTTGATGTATCTCGAAGAAGACGATACCCGTGATGTTGGTGTGATAATGACGTTACCGCTCTTTTTCCCTTTTCTCTGGTTCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGA", - "dna_sequence_length": 315, - "functions": [ - "inner membrane protein" - ], - "id": "CDS_4079", - "location": [ - [ - "NC_000913", - 4385704, - "+", - 315 - ] - ], - "md5": "50549ac60f218ce146bedd18ebc8494e", - "parent_gene": "", - "protein_md5": "a79f8c7aa6a157eb110797bca4970774", - "protein_translation": "MSARMFVLCCIWFIVAFLWITITSALDKEWMIDGRGINNVCDVLMYLEEDDTRDVGVIMTLPLFFPFLWFALWRKKRGWFMYATALAIFGYWLWQFFLRYQFCL", - "protein_translation_length": 104, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4155" - ], - [ - "gene_synonym", - "JW4120" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39285" - ], - [ - "gene_synonym", - "yjeP" - ], - [ - "gene_synonym", - "EcoGene:EG12478" - ], - [ - "gene_synonym", - "GI:16131984" - ], - [ - "gene_synonym", - "mscM" - ], - [ - "gene_synonym", - "GeneID:948676" - ], - [ - "gene_synonym", - "NP_418583.1" - ], - [ - "gene_synonym", - "b4159" - ], - [ - "gene_synonym", - "ASAP:ABE-0013621" - ] - ], - "dna_sequence": "GTGCGCCTGATTATCACTTTTCTGATGGCCTGGTGCCTCAGTTGGGGGGCGTACGCCGCGACGGCCCCCGATAGCAAACAAATCACTCAGGAACTGGAGCAGGCAAAAGCGGCGAAACCCGCACAGCCGGAAGTCGTAGAGGCGCTCCAGTCTGCCTTAAATGCGCTTGAGGAACGAAAAGGTTCCCTTGAGCGCATCAAACAATATCAGCAAGTTATCGATAATTATCCGAAACTCTCCGCTACTCTGCGCGCACAATTAAACAACATGCGTGACGAGCCGCGCAGCGTGTCGCCGGGAATGTCTACCGACGCGCTGAATCAGGAAATTCTCCAGGTCAGCAGCCAGTTGCTGGATAAAAGCCGTCAGGCCCAGCAAGAGCAGGAGCGCGCCCGCGAGATTGCCGATTCGCTGAATCAACTGCCGCAACAGCAAACCGACGCCCGCCGTCAGTTAAATGAGATCGAGCGCCGCCTGGGAACGCTTACCGGCAATACTCCGCTCAATCAGGCACAAAATTTCGCGTTGCAGTCTGACTCTGCACGTCTTAAGGCGCTCGTTGATGAACTGGAGCTGGCGCAGCTGTCTGCCAATAACCGCCAGGAATTAGCGCGCTTACGCTCAGAGCTGGCGGAAAAAGAGAGCCAGCAACTGGATGCGTATTTGCAGGCCTTGCGTAATCAATTAAACAGCCAACGTCAGCTTGAGGCGGAGCGGGCGCTGGAAAGTACCGAATTGCTGGCAGAAAACAGCGCCGATTTGCCGAAAGATATCGTCGCGCAATTCAAAATTAACCGCGAACTATCGGCGGCTTTGAATCAACAGGCGCAGCGGATGGATCTCGTTGCCTCGCAACAGCGTCAGGCTGCCAGCCAGACGTTACAGGTCCGGCAGGCGTTGAATACGCTGCGTGAACAGTCGCAATGGCTGGGATCGTCCAATCTGCTCGGCGAAGCGCTGCGGGCGCAGGTGGCACGGCTGCCGGAAATGCCGAAACCACAACAGCTTGATACCGAAATGGCGCAGTTGCGTGTGCAACGGTTACGTTATGAGGATCTGCTTAATAAACAGCCGCTGCTACGGCAAATTCATCAGGCCGACGGTCAGCCGCTGACTGCCGAGCAAAACCGTATTCTGGAAGCACAACTGCGCACTCAGCGTGAGTTGCTGAACTCATTGTTGCAGGGTGGCGACACGCTACTATTGGAACTGACCAAGCTGAAAGTCTCCAACGGGCAACTGGAGGATGCGCTGAAAGAGGTGAACGAAGCAACGCACCGCTATCTGTTCTGGACCTCTGACGTGCGCCCGATGACCATCGCCTGGCCGCTGGAAATCGCCCAGGATCTGCGTCGTCTCATTTCGCTGGACACCTTCAGTCAGTTGGGCAAAGCCAGTGTGATGATGCTGACCAGCAAAGAGACAATTTTGCCGCTGTTTGGCGCGTTGATTCTGGTCGGTTGCAGTATTTACTCGCGCCGCTATTTCACCCGTTTTCTTGAACGTTCGGCGGCGAAAGTTGGCAAAGTGACTCAGGATCACTTCTGGCTGACGTTGCGCACTCTTTTCTGGTCGATTCTCGTCGCGTCACCGTTACCGGTGCTGTGGATGACGCTGGGTTACGGCTTGCGCGAGGCGTGGCCTTATCCGCTGGCGGTCGCGATTGGCGATGGTGTAACGGCCACCGTGCCGCTGCTGTGGGTAGTGATGATTTGCGCCACCTTTGCCCGCCCGAACGGCTTGTTTATCGCTCATTTTGGCTGGCCGCGCGAACGTGTTTCCCGTGGGATGCGCTACTACCTGATGAGCATCGGGCTTATTGTGCCGCTGATTATGGCGCTGATGATGTTCGATAACCTCGACGACCGTGAATTCTCCGGTTCGCTGGGACGGCTTTGCTTTATCCTCATTTGCGGTGCGCTGGCGGTGGTCACCCTCAGCCTGAAAAAGGCCGGGATTCCGCTGTATCTCAACAAAGAGGGCAGCGGCGACAACATTACCAACCATATGCTGTGGAACATGATGATTGGCGCGCCGTTGGTTGCCATTCTGGCGTCGGCGGTGGGTTATCTGGCAACGGCACAGGCGCTGTTAGCGAGGCTTGAAACCTCGGTTGCCATCTGGTTCCTGCTACTGGTGGTTTATCACGTTATCCGCCGCTGGATGCTGATCCAGCGCCGCAGGCTGGCGTTTGATCGGGCGAAGCATCGCCGGGCAGAGATGTTAGCGCAACGTGCGCGTGGCGAAGAGGAAGCGCATCATCACAGTAGCCCGGAAGGAGCAATTGAAGTCGATGAAAGCGAAGTCGATCTCGATGCCATCAGTGCGCAATCCTTGCGGCTGGTGCGCTCAATTTTGATGTTGATCGCCCTGCTTTCTGTCATTGTGCTGTGGTCAGAAATCCATTCCGCTTTCGGCTTCCTCGAAAATATTTCGCTGTGGGATGTCACCTCCACGGTACAGGGCGTAGAAAGTCTGGAGCCAATTACCCTCGGTGCGGTGCTGATTGCCATTCTGGTGTTTATCATCACCACGCAGCTGGTGCGCAACTTGCCCGCGCTGCTGGAACTGGCGATTTTGCAGCACCTGGATTTAACGCCGGGTACGGGTTACGCCATCACCACCATCACCAAATATCTGCTGATGCTGATTGGCGGGCTGGTCGGCTTCTCAATGATTGGTATTGAGTGGTCGAAATTGCAGTGGCTGGTTGCCGCGCTCGGTGTTGGTCTCGGTTTTGGTTTGCAGGAAATTTTCGCCAACTTTATCTCTGGTCTGATTATCCTGTTCGAAAAACCGATTCGCATTGGCGATACGGTGACAATTCGCGATCTCACCGGTAGCGTGACGAAAATTAACACCCGCGCCACCACCATCAGCGACTGGGACCGTAAAGAGATAATCGTGCCGAACAAGGCGTTTATTACCGAGCAGTTTATCAACTGGTCGCTCTCTGACTCGGTCACGCGCGTGGTGTTGACGATACCGGCCCCTGCCGATGCCAATAGCGAAGAAGTGACGGAAATCCTGCTCACCGCAGCGCGTCGCTGCTCGCTGGTGATCGACAACCCGGCACCGGAAGTCTTCCTGGTGGATCTGCAACAGGGGATTCAGATTTTCGAGCTGCGTATTTACGCCGCTGAGATGGGTCACCGTATGCCGCTACGCCATGAGATCCACCAGCTGATTCTGGCTGGCTTCCATGCCCACGGTATCGATATGCCATTCCCGCCCTTCCAGATGCGTCTGGAAAGCCTCAACGGTAAACAAACGGGGAGAACGCTGACGTCTGCGGGCAAAGGTCGTCAGGCGGGAAGTTTGTAA", 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"MRLIITFLMAWCLSWGAYAATAPDSKQITQELEQAKAAKPAQPEVVEALQSALNALEERKGSLERIKQYQQVIDNYPKLSATLRAQLNNMRDEPRSVSPGMSTDALNQEILQVSSQLLDKSRQAQQEQERAREIADSLNQLPQQQTDARRQLNEIERRLGTLTGNTPLNQAQNFALQSDSARLKALVDELELAQLSANNRQELARLRSELAEKESQQLDAYLQALRNQLNSQRQLEAERALESTELLAENSADLPKDIVAQFKINRELSAALNQQAQRMDLVASQQRQAASQTLQVRQALNTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQQLDTEMAQLRVQRLRYEDLLNKQPLLRQIHQADGQPLTAEQNRILEAQLRTQRELLNSLLQGGDTLLLELTKLKVSNGQLEDALKEVNEATHRYLFWTSDVRPMTIAWPLEIAQDLRRLISLDTFSQLGKASVMMLTSKETILPLFGALILVGCSIYSRRYFTRFLERSAAKVGKVTQDHFWLTLRTLFWSILVASPLPVLWMTLGYGLREAWPYPLAVAIGDGVTATVPLLWVVMICATFARPNGLFIAHFGWPRERVSRGMRYYLMSIGLIVPLIMALMMFDNLDDREFSGSLGRLCFILICGALAVVTLSLKKAGIPLYLNKEGSGDNITNHMLWNMMIGAPLVAILASAVGYLATAQALLARLETSVAIWFLLLVVYHVIRRWMLIQRRRLAFDRAKHRRAEMLAQRARGEEEAHHHSSPEGAIEVDESEVDLDAISAQSLRLVRSILMLIALLSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILVFIITTQLVRNLPALLELAILQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTEILLTAARRCSLVIDNPAPEVFLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFHAHGIDMPFPPFQMRLESLNGKQTGRTLTSAGKGRQAGSL", - "protein_translation_length": 1107, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4156" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8K1" - ], - [ - "gene_synonym", - "JW4121" - ], - [ - "gene_synonym", - "EcoGene:EG10775" - ], - [ - "gene_synonym", - "psd" - ], - [ - "gene_synonym", - "GeneID:948673" - ], - [ - "gene_synonym", - "NP_418584.1" - ], - [ - "gene_synonym", - "GI:16131985" - ], - [ - "gene_synonym", - "b4160" - ], - [ - "gene_synonym", - "ASAP:ABE-0013623" - ] - ], - "dna_sequence": "TTGTTAAATTCATTTAAACTTTCGCTACAGTACATTCTGCCGAAACTATGGCTTACTCGCCTGGCGGGTTGGGGCGCAAGCAAGCGGGCAGGATGGCTGACAAAACTGGTTATCGATCTGTTCGTTAAATACTACAAGGTCGACATGAAAGAGGCGCAAAAGCCGGACACCGCCAGCTACCGCACCTTTAACGAATTCTTTGTCCGTCCGCTGCGTGACGAAGTACGCCCAATCGATACCGATCCGAATGTACTGGTCATGCCTGCCGATGGCGTTATCAGCCAGTTGGGTAAAATCGAAGAAGATAAAATCCTGCAAGCCAAAGGCCACAACTACAGCCTCGAAGCCCTGCTGGCAGGCAACTATCTGATGGCGGACCTGTTCCGCAACGGTACGTTTGTGACCACTTACCTCTCCCCGCGTGACTACCACCGCGTACACATGCCGTGCAACGGTATTCTGCGTGAGATGATCTACGTGCCGGGCGATCTCTTCTCCGTTAACCATCTCACGGCTCAGAACGTGCCGAATCTGTTTGCCCGTAACGAACGCGTGATTTGCCTTTTCGATACCGAATTTGGCCCAATGGCGCAGATTCTGGTCGGAGCGACGATTGTTGGCAGCATTGAGACGGTCTGGGCGGGCACCATTACGCCGCCGCGCGAAGGTATCATCAAGCGCTGGACCTGGCCTGCCGGGGAAAACGACGGTTCTGTGGCACTGCTGAAAGGCCAGGAAATGGGTCGCTTTAAACTCGGTTCCACCGTTATCAACCTGTTTGCACCGGGTAAAGTGAATCTGGTTGAGCAACTGGAAAGCCTGTCTGTCACGAAAATTGGCCAGCCGCTGGCAGTATCTACCGAAACCTTTGTTACGCCAGACGCTGAACCTGCCCCGCTTCCTGCTGAAGAGATCGAAGCAGAACACGACGCCAGCCCATTGGTTGACGACAAAAAAGACCAGGTCTAA", - "dna_sequence_length": 969, - "functions": [ - "phosphatidylserine decarboxylase" - ], - "id": "CDS_4081", - "location": [ - [ - "NC_000913", - 4390360, - "-", - 969 - ] - ], - "md5": "98c1148ccf2bbd4f70fc15c6de6b032f", - "parent_gene": "", - "protein_md5": "297b16b3d36ecef02c62a833d52030ad", - "protein_translation": "MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKYYKVDMKEAQKPDTASYRTFNEFFVRPLRDEVRPIDTDPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTITPPREGIIKRWTWPAGENDGSVALLKGQEMGRFKLGSTVINLFAPGKVNLVEQLESLSVTKIGQPLAVSTETFVTPDAEPAPLPAEEIEAEHDASPLVDDKKDQV", - "protein_translation_length": 322, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111696" - ], - [ - "gene_synonym", - "ECK4157" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39286" - ], - [ - "gene_synonym", - "JW4122" - ], - [ - "gene_synonym", - "yjeQ" - ], - [ - "gene_synonym", - "EcoGene:EG12479" - ], - [ - "gene_synonym", - "engC" - ], - [ - "gene_synonym", - "b4161" - ], - [ - "gene_synonym", - "NP_418585.4" - ], - [ - "gene_synonym", - "GeneID:948674" - ], - [ - "gene_synonym", - "ASAP:ABE-0013626" - ], - [ - "gene_synonym", - "rsgA" - ] - ], - "dna_sequence": "TTGAGTAAAAATAAACTCTCCAAAGGCCAGCAGCGCCGCGTGAACGCCAATCACCAGCGTCGTCTTAAAACGTCTAAGGAGAAGCCCGACTACGACGACAATCTGTTTGGCGAGCCTGATGAAGGTATCGTCATCAGCCGCTTTGGTATGCACGCTGATGTGGAATCCGCCGATGGCGACGTTCACCGCTGCAATATTCGCCGTACCATCCGTTCGCTGGTAACCGGCGACCGCGTAGTCTGGCGTCCGGGTAAACCGGCGGCGGAAGGCGTAAATGTCAAAGGGATCGTGGAAGCGGTGCATGAGCGTACCTCGGTGTTGACGCGTCCGGATTTCTACGACGGCGTAAAACCTATTGCCGCCAACATCGACCAGATTGTCATTGTCTCCGCCATTTTGCCGGAGCTGTCGCTCAATATTATCGACCGTTACCTGGTGGCCTGCGAAACCTTGCAGATTGAGCCGATTATTGTGCTCAACAAGATAGACCTGCTGGACGACGAAGGCATGGCGTTCGTCAACGAGCAGATGGATATCTACCGCAATATCGGTTATCGCGTATTGATGGTTTCCAGCCATACTCAGGATGGGCTAAAACCGCTGGAAGAGGCGTTGACCGGGCGCATCAGCATTTTTGCCGGGCAGTCTGGCGTCGGCAAATCCAGCCTGCTGAATGCGTTGCTGGGGCTGCAAAAAGAGATCCTGACCAACGATATCTCTGACAACTCGGGGCTCGGTCAGCACACCACGACCGCCGCTCGGCTGTATCACTTCCCGCACGGCGGTGATGTGATTGACTCCCCAGGAGTGCGTGAGTTCGGCCTCTGGCACCTGGAGCCGGAACAAATCACTCAGGGCTTTGTCGAATTCCATGACTATTTAGGTCTGTGTAAATATCGCGATTGCAAACACGATACCGATCCGGGCTGCGCTATCCGGGAAGCGGTTGAGGAAGGGAAAATCGCGGAAACCCGTTTCGAAAACTATCACCGTATTCTGGAAAGCATGGCGCAGGTAAAAACGCGTAAAAACTTTTCTGATACGGATGACTGA", - "dna_sequence_length": 1053, - "functions": [ - "ribosome small subunit-dependent GTPase A" - ], - "id": "CDS_4082", - "location": [ - [ - "NC_000913", - 4391509, - "-", - 1053 - ] - ], - "md5": "b258a25d34d070955b2f8580609e07b5", - "parent_gene": "", - "protein_md5": "ee987380464b011586c4911576560dd8", - "protein_translation": "MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD", - "protein_translation_length": 350, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111697" - ], - [ - "gene_synonym", - "yjeR" - ], - [ - "gene_synonym", - "NP_418586.4" - ], - [ - "gene_synonym", - "EcoGene:EG12480" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A784" - ], - [ - "gene_synonym", - "ECK4158" - ], - [ - "gene_synonym", - "orn" - ], - [ - "gene_synonym", - "ASAP:ABE-0013631" - ], - [ - "gene_synonym", - "GeneID:948675" - ], - [ - "gene_synonym", - "b4162" - ], - [ - "gene_synonym", - "JW5740" - ] - ], - "dna_sequence": "ATGAGTGCCAATGAAAACAACCTGATTTGGATCGATCTTGAGATGACCGGTCTGGATCCCGAGCGCGATCGCATTATTGAGATTGCCACGCTGGTGACCGATGCCAACCTGAATATTCTGGCAGAAGGGCCGACCATTGCAGTACACCAGTCTGATGAACAGCTGGCGCTGATGGATGACTGGAACGTGCGCACCCATACCGCCAGCGGGCTGGTAGAGCGCGTGAAAGCGAGCACGATGGGCGATCGGGAAGCTGAACTGGCAACGCTCGAATTTTTAAAACAGTGGGTGCCTGCGGGAAAATCGCCGATTTGCGGTAACAGCATCGGTCAGGACCGTCGTTTCCTGTTTAAATACATGCCGGAGCTGGAAGCCTACTTCCACTACCGTTATCTCGATGTCAGCACCCTGAAAGAGCTGGCGCGCCGCTGGAAGCCGGAAATTCTGGATGGTTTTACCAAGCAGGGGACGCATCAGGCGATGGATGATATCCGTGAATCGGTGGCGGAGCTGGCTTACTACCGCGAGCATTTTATCAAGCTGTAA", - "dna_sequence_length": 546, - "functions": [ - "oligoribonuclease" - ], - "id": "CDS_4083", - "location": [ - [ - "NC_000913", - 4391604, - "+", - 546 - ] - ], - "md5": "d56396b08af9a72a646f7271306f199d", - "parent_gene": "", - "protein_md5": "cc0fe12bf30642df7d3d635784fe57c9", - "protein_translation": "MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDGFTKQGTHQAMDDIRESVAELAYYREHFIKL", - "protein_translation_length": 181, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjeV" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:C1P621" - ], - [ - "gene_synonym", - "EcoGene:EG14475" - ], - [ - "gene_synonym", - "YP_002791261.1" - ], - [ - "gene_synonym", - "b4670" - ], - [ - "gene_synonym", - "GI:226524762" - ], - [ - "gene_synonym", - "ECK4485" - ], - [ - "gene_synonym", - "GeneID:7751630" - ] - ], - "dna_sequence": "ATGCGTTTTTATTTTTATTCACAAGCTGTGGATGAATCAGGCGTCACGCGGTAA", - "dna_sequence_length": 54, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_4084", - "location": [ - [ - "NC_000913", - 4392892, - "+", - 54 - ] - ], - "md5": "d78c366718e1c8ab2ad84d70e1028c26", - "parent_gene": "", - "protein_md5": "6d0e298b06d973e174019465f1130549", - "protein_translation": "MRFYFYSQAVDESGVTR", - "protein_translation_length": 17, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW4124" - ], - [ - "gene_synonym", - "GeneID:948686" - ], - [ - "gene_synonym", - "queG" - ], - [ - "gene_synonym", - "NP_418587.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39288" - ], - [ - "gene_synonym", - "EcoGene:EG12481" - ], - [ - "gene_synonym", - "ASAP:ABE-0013641" - ], - [ - "gene_synonym", - "b4166" - ], - [ - "gene_synonym", - "ECK4162" - ], - [ - "gene_synonym", - "GI:16131988" - ], - [ - "gene_synonym", - "yjeS" - ] - ], - "dna_sequence": "ATGTCAGAGCCCCTCGATCTCAATCAGTTAGCGCAAAAAATTAAACAGTGGGGGCTGGAACTGGGCTTTCAGCAGGTAGGTATTACCGATACCGATCTCAGCGAGTCCGAGCCCAAACTGCAAGCATGGCTGGACAAACAATACCACGGCGAAATGGACTGGATGGCACGTCACGGTATGCTGCGCGCTCGCCCTCATGAGTTATTGCCCGGTACGCTGCGCGTGATCAGCGTGCGGATGAATTACCTTCCTGCTAACGCCGCATTTGCCAGCACGCTGAAAAACCCCAAACTCGGCTATGTTAGCCGTTATGCGCTGGGCCGTGACTATCACAAACTTCTGCGCAACCGACTCAAAAAGCTGGGCGAGATGATTCAGCAACATTGTGTTTCGCTGAATTTTAGACCGTTTGTCGATTCTGCGCCTATTCTCGAGCGCCCGTTAGCTGAAAAAGCTGGGCTCGGCTGGACAGGTAAGCACTCACTTATCCTCAATCGCGAGGCCGGTTCGTTCTTCTTTTTAGGCGAATTGCTGGTCGATATTCCGCTGCCCGTGGATCAACCAGTCGAGGAAGGATGCGGCAAATGCGTGGCCTGTATGACGATTTGCCCGACCGGTGCCATCGTCGAGCCATATACCGTCGATGCTCGCCGCTGTATCTCTTATCTCACCATCGAACTTGAAGGGGCGATCCCGGAAGAGTTGCGACCGTTAATGGGAAACCGTATTTACGGTTGCGATGACTGCCAGCTTATCTGCCCGTGGAATCGCTATTCACAACTCACCACAGAAGAGGATTTCAGCCCGCGTAAGCCGCTACACGCACCGGAACTCATTGAGTTATTCGCCTGGAGCGAAGAGAAGTTTTTAAAAGTCACGGAAGGATCGGCGATTCGTCGTATTGGTCACCTGCGTTGGCTGCGTAATATCGCCGTAGCATTAGGCAATGCCCCTTGGGATGAAACGATTTTGACAGCGCTGGAAAGTCGTAAAGGTGAGCACCCACTTCTCGATGAGCACATAGCGTGGGCGATTGCGCAGCAAATAGAGAGACGAAATGCGTGCATAGTCGAAGTGCAATTGCCGAAAAAACAGCGTCTGGTTCGGGTGATTGAAAAAGGGTTACCGCGTGACGCCTGA", - "dna_sequence_length": 1140, - "functions": [ - "epoxyqueuosine reductase, cobalamine-stimulated", - "queosine biosynthesis" - ], - "id": "CDS_4085", - "location": [ - [ - "NC_000913", - 4394067, - "-", - 1140 - ] - ], - "md5": "242610ecc7f4e8cb330b6d3372bf885f", - "parent_gene": "", - "protein_md5": "ddc1d6bb3e5a128d2b03981dca1be080", - "protein_translation": "MSEPLDLNQLAQKIKQWGLELGFQQVGITDTDLSESEPKLQAWLDKQYHGEMDWMARHGMLRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVSRYALGRDYHKLLRNRLKKLGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKHSLILNREAGSFFFLGELLVDIPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEELRPLMGNRIYGCDDCQLICPWNRYSQLTTEEDFSPRKPLHAPELIELFAWSEEKFLKVTEGSAIRRIGHLRWLRNIAVALGNAPWDETILTALESRKGEHPLLDEHIAWAIAQQIERRNACIVEVQLPKKQRLVRVIEKGLPRDA", - "protein_translation_length": 379, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW4125" - ], - [ - "gene_synonym", - "EcoGene:EG11758" - ], - [ - "gene_synonym", - "GeneID:948685" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31806" - ], - [ - "gene_synonym", - "NP_418588.1" - ], - [ - "gene_synonym", - "yjeF" - ], - [ - "gene_synonym", - "ASAP:ABE-0013644" - ], - [ - "gene_synonym", - "b4167" - ], - [ - "gene_synonym", - "ECK4163" - ], - [ - "gene_synonym", - "nnr" - ], - [ - "gene_synonym", - "GI:16131989" - ] - ], - "dna_sequence": "ATGACGGACCATACAATGAAGAAAAACCCCGTAAGTATACCACACACCGTCTGGTACGCCGACGATATCCGCCGCGGAGAACGCGAGGCGGCAGATGTGCTGGGGCTCACACTCTATGAGCTGATGCTTCGCGCTGGCGAGGCCGCATTCCAGGTGTGTCGTTCGGCGTATCCTGACGCCCGCCACTGGCTGGTGCTGTGCGGTCATGGTAATAACGGCGGCGATGGCTACGTGGTCGCGCGACTGGCCAAAGCGGTCGGCATTGAGGTCACGTTGTTGGCCCAGGAGAGCGACAAACCGTTGCCGGAAGAGGCCGCGCTGGCACGCGAAGCATGGTTAAACGCGGGTGGCGAGATCCATGCTTCGAATATTGTCTGGCCCGAATCGGTAGATCTGATTGTTGATGCGCTGCTCGGTACCGGTTTGCGGCAAGCGCCCCGCGAATCCATTAGCCAGTTAATCGACCACGCTAATTCCCATCCTGCGCCGATTGTGGCGGTTGATATCCCTTCCGGCCTGCTGGCTGAAACTGGCGCTACGCCAGGCGCGGTGATCAACGCCGATCACACCATCACTTTTATTGCGCTGAAACCAGGCTTGCTCACTGGAAAAGCGCGGGATGTTACCGGACAACTGCATTTTGACTCACTGGGGCTGGATAGTTGGCTGGCAGGTCAGGAGACGAAAATTCAGCGGTTTTCAGCAGAACAACTTTCTCACTGGCTAAAACCGCGTCGCCCGACTTCGCATAAAGGCGATCACGGGCGGCTGGTAATTATCGGTGGCGATCACGGCACGGCGGGGGCTATTCGTATGACGGGGGAAGCGGCGCTGCGTGCTGGTGCTGGTTTAGTCCGAGTACTGACCCGCAGTGAAAACATTGCGCCGCTGCTGACTGCACGACCGGAATTGATGGTGCATGAACTGACGATGGACTCTCTTACCGAAAGCCTGGAATGGGCCGATGTGGTGGTGATTGGTCCCGGTCTGGGCCAGCAAGAGTGGGGGAAAAAAGCACTGCAAAAAGTTGAGAATTTTCGCAAACCGATGTTGTGGGATGCCGATGCATTGAACCTGCTGGCAATCAATCCCGATAAGCGTCACAATCGCGTGATCACGCCGCATCCTGGCGAGGCCGCACGGTTGTTAGGCTGTTCCGTCGCTGAAATTGAAAGTGACCGCTTACATTGCGCCAAACGTCTGGTACAACGTTATGGCGGCGTAGCGGTGCTGAAAGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCGGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCTGTGCAGGCTGTGTCGCGCACGGTGCGGCAGCTGACGTACTGGCGGCGCGTTTTGGAACGCGCGGGATGCTGGCAACCGATCTCTTTTCCACGCTACAGCGTATTGTTAACCCGGAAGTGACTGATAAAAACCATGATGAATCGAGTAATTCCGCTCCCTGA", - "dna_sequence_length": 1548, - "functions": [ - "bifunctional NAD(P)H-hydrate repair enzyme", - "C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase" - ], - "id": "CDS_4086", - "location": [ - [ - "NC_000913", - 4394066, - "+", - 1548 - ] - ], - "md5": "8856219c57b3f5ff210a81396600c27e", - "parent_gene": "", - "protein_md5": "132ab4cc017bcccd2caabbb854d9d08f", - "protein_translation": "MTDHTMKKNPVSIPHTVWYADDIRRGEREAADVLGLTLYELMLRAGEAAFQVCRSAYPDARHWLVLCGHGNNGGDGYVVARLAKAVGIEVTLLAQESDKPLPEEAALAREAWLNAGGEIHASNIVWPESVDLIVDALLGTGLRQAPRESISQLIDHANSHPAPIVAVDIPSGLLAETGATPGAVINADHTITFIALKPGLLTGKARDVTGQLHFDSLGLDSWLAGQETKIQRFSAEQLSHWLKPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRAGAGLVRVLTRSENIAPLLTARPELMVHELTMDSLTESLEWADVVVIGPGLGQQEWGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIESDRLHCAKRLVQRYGGVAVLKGAGTVVAAHPDALGIIDAGNAGMASGGMGDVLSGIIGALLGQKLSPYDAACAGCVAHGAAADVLAARFGTRGMLATDLFSTLQRIVNPEVTDKNHDESSNSAP", - "protein_translation_length": 515, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418589.1" - ], - [ - "gene_synonym", - "JW4126" - ], - [ - "gene_synonym", - "tsaE" - ], - [ - "gene_synonym", - "GeneID:948684" - ], - [ - "gene_synonym", - "GI:16131990" - ], - [ - "gene_synonym", - "yjeE" - ], - [ - "gene_synonym", - "b4168" - ], - [ - "gene_synonym", - "EcoGene:EG11757" - ], - [ - "gene_synonym", - "ECK4164" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF67" - ], - [ - "gene_synonym", - "ASAP:ABE-0013649" - ] - ], - "dna_sequence": "ATGATGAATCGAGTAATTCCGCTCCCTGATGAGCAGGCAACATTAGACCTGGGCGAGCGGGTAGCGAAAGCCTGCGATGGCGCAACCGTAATCTATCTGTATGGCGATTTAGGCGCAGGTAAAACCACCTTTAGCCGGGGCTTTTTACAGGCTCTGGGTCATCAGGGTAATGTCAAAAGCCCCACTTATACGCTGGTCGAACCCTATACGCTCGACAACTTAATGGTCTATCACTTTGATTTGTACCGCCTTGCCGATCCCGAGGAGCTGGAGTTTATGGGGATCCGCGATTATTTTGCCAACGATGCCATCTGCCTGGTGGAGTGGCCACAACAAGGTACAGGTGTTCTTCCTGACCCGGATGTCGAAATACACATTGATTATCAGGCACAAGGCCGTGAGGCGCGCGTGAGTGCGGTTTCCTCTGCGGGTGAATTGTTGCTGGCGCGTTTAGCCGGTTAA", - "dna_sequence_length": 462, - "functions": [ - "tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein", - "ADP binding protein" - ], - "id": "CDS_4087", - "location": [ - [ - "NC_000913", - 4395585, - "+", - 462 - ] - ], - "md5": "d6b808825e5f7eb9b12634b214799cd7", - "parent_gene": "", - "protein_md5": "3cf4551f131dd653f0227023b6c1c1fb", - "protein_translation": "MMNRVIPLPDEQATLDLGERVAKACDGATVIYLYGDLGAGKTTFSRGFLQALGHQGNVKSPTYTLVEPYTLDNLMVYHFDLYRLADPEELEFMGIRDYFANDAICLVEWPQQGTGVLPDPDVEIHIDYQAQGREARVSAVSSAGELLLARLAG", - "protein_translation_length": 153, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948683" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P26365" - ], - [ - "gene_synonym", - "JW4127" - ], - [ - "gene_synonym", - "amiB" - ], - [ - "gene_synonym", - "GI:16131991" - ], - [ - "gene_synonym", - "yjeD" - ], - [ - "gene_synonym", - "b4169" - ], - [ - "gene_synonym", - "EcoGene:EG11363" - ], - [ - "gene_synonym", - "ECK4165" - ], - [ - "gene_synonym", - "ASAP:ABE-0013653" - ], - [ - "gene_synonym", - "NP_418590.1" - ] - ], - "dna_sequence": "ATGATGTATCGCATCAGAAATTGGTTGGTAGCGACGCTGCTGCTGCTGTGCACGCCGGTGGGTGCCGCGACGCTCTCTGATATTCAGGTTTCTAACGGTAATCAACAGGCGCGGATAACGTTGAGTTTTATTGGCGATCCTGATTATGCGTTTAGCCATCAAAGCAAACGCACCGTGGCGCTCGATATCAAACAAACGGGCGTGATTCAGGGACTGCCGTTGTTGTTCAGCGGCAATAATCTGGTGAAGGCGATTCGCTCTGGAACGCCTAAAGATGCACAAACGCTACGGCTGGTGGTCGATCTTACCGAAAACGGTAAAACCGAAGCGGTGAAGCGGCAGAATGGCAGCAATTACACTGTCGTCTTTACGATTAACGCCGATGTGCCGCCACCGCCTCCTCCGCCGCCCGTGGTTGCGAAACGCGTTGAAACGCCTGCGGTTGTCGCACCGCGCGTCAGCGAACCGGCGCGCAATCCGTTTAAAACGGAAAGTAACCGCACTACGGGTGTTATCAGCAGTAATACGGTAACGCGTCCGGCAGCGCGCGCGACGGCTAACACTGGCGATAAAATTATCATCGCTATTGATGCCGGACACGGCGGTCAGGACCCTGGCGCTATCGGCCCCGGTGGTACGCGGGAGAAAAATGTCACCATCGCCATCGCGCGTAAATTGCGTACTTTGCTCAATGACGATCCGATGTTTAAAGGCGTTTTAACCCGTGACGGGGATTACTTTATCTCGGTGATGGGGCGCAGTGATGTGGCACGTAAGCAAAACGCCAATTTCCTCGTGTCGATTCACGCTGATGCCGCACCGAACCGCAGTGCGACTGGCGCTTCCGTATGGGTGCTCTCTAACCGTCGCGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCTGGATTTACAGTTCGGTCATTCCCAGCGGGTAGGGTATGATGTAGCGACCAGTATGATCAGTCAGTTGCAACGCATTGGCGAAATACATAAACGTCGACCAGAACACGCCAGCCTTGGCGTTCTGCGCTCGCCGGATATCCCATCAGTACTGGTCGAAACCGGTTTTATCAGCAACAACAGCGAAGAACGTTTGCTGGCGAGCGACGATTACCAACAACAGCTGGCAGAAGCCATTTACAAAGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAA", - "dna_sequence_length": 1338, - "functions": [ - "N-acetylmuramoyl-l-alanine amidase II" - ], - "id": "CDS_4088", - "location": [ - [ - "NC_000913", - 4396065, - "+", - 1338 - ] - ], - "md5": "2ffbe445474b8696f39ee25cdba4d296", - "parent_gene": "", - "protein_md5": "ca4025de90ee665fa1d45ae7c956e46e", - "protein_translation": "MMYRIRNWLVATLLLLCTPVGAATLSDIQVSNGNQQARITLSFIGDPDYAFSHQSKRTVALDIKQTGVIQGLPLLFSGNNLVKAIRSGTPKDAQTLRLVVDLTENGKTEAVKRQNGSNYTVVFTINADVPPPPPPPPVVAKRVETPAVVAPRVSEPARNPFKTESNRTTGVISSNTVTRPAARATANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNVTIAIARKLRTLLNDDPMFKGVLTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRSATGASVWVLSNRRANSEMASWLEQHEKQSELLGGAGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVATSMISQLQRIGEIHKRRPEHASLGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLAEAIYKGLRNYFLAHPMQSAPQGATAQTASTVTTPDRTLPN", - "protein_translation_length": 445, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4170" - ], - [ - "gene_synonym", - "GeneID:948691" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23367" - ], - [ - "gene_synonym", - "JW4128" - ], - [ - "gene_synonym", - "mutL" - ], - [ - "gene_synonym", - "GI:16131992" - ], - [ - "gene_synonym", - "EcoGene:EG11281" - ], - [ - "gene_synonym", - "ECK4166" - ], - [ - "gene_synonym", - "NP_418591.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013655" - ] - ], - "dna_sequence": "ATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCGAACGCGGTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGCCTGACGCTCACTTCACGCACCGCAGAACAGCAGGAAGCCTGGCAGGCCTATGCCGAAGGGCGCGATATGAACGTGACGGTAAAACCGGCGGCGCATCCTGTGGGGACGACGCTGGAGGTGCTGGATCTGTTCTACAACACCCCGGCGCGGCGCAAATTCCTGCGCACCGAGAAAACCGAATTTAACCACATTGATGAGATCATCCGCCGCATTGCGCTGGCGCGTTTCGACGTCACGATCAACCTGTCGCATAACGGTAAAATTGTGCGTCAGTACCGCGCAGTGCCGGAAGGCGGGCAAAAAGAACGGCGCTTAGGCGCGATTTGCGGCACCGCTTTTCTTGAACAAGCGCTGGCGATTGAATGGCAACACGGCGATCTCACGCTACGCGGCTGGGTGGCCGATCCAAATCACACCACGCCCGCACTGGCAGAAATTCAGTATTGCTACGTGAACGGTCGCATGATGCGCGATCGCCTGATCAATCACGCGATCCGCCAGGCCTGCGAAGACAAACTGGGGGCCGATCAGCAACCGGCATTTGTGTTGTATCTGGAGATCGACCCACATCAGGTGGACGTCAACGTGCACCCCGCCAAACACGAAGTGCGTTTCCATCAGTCGCGTCTGGTGCATGATTTTATCTATCAGGGCGTGCTGAGCGTGCTACAACAGCAACTGGAAACGCCGCTACCGCTGGACGATGAACCCCAACCTGCACCGCGTTCCATTCCGGAAAACCGCGTGGCGGCGGGGCGCAATCACTTTGCAGAACCGGCAGCTCGTGAGCCGGTAGCTCCGCGCTACACTCCTGCGCCAGCATCAGGCAGTCGTCCGGCTGCCCCCTGGCCGAATGCGCAGCCAGGCTACCAGAAACAGCAAGGTGAAGTGTATCGCCAGCTTTTGCAAACGCCCGCGCCGATGCAAAAATTAAAAGCGCCGGAACCGCAGGAACCTGCACTTGCGGCGAACAGTCAGAGTTTTGGTCGGGTACTGACTATCGTCCATTCCGACTGTGCGTTGCTGGAGCGCGACGGCAACATTTCACTTTTATCCTTGCCAGTGGCAGAACGTTGGCTGCGTCAGGCACAATTGACGCCGGGTGAAGCGCCCGTTTGCGCCCAGCCGCTGCTGATTCCGTTGCGGCTAAAAGTTTCTGCCGAAGAAAAATCGGCATTAGAAAAAGCGCAGTCTGCCCTGGCGGAATTGGGTATTGATTTCCAGTCAGATGCACAGCATGTGACCATCAGGGCAGTGCCTTTACCCTTACGCCAACAAAATTTACAAATCTTGATTCCTGAACTGATAGGCTACCTGGCGAAGCAGTCCGTATTCGAACCTGGCAATATTGCGCAGTGGATTGCACGAAATCTGATGAGCGAACATGCGCAGTGGTCAATGGCACAGGCCATAACCCTGCTGGCGGACGTGGAACGGTTATGTCCGCAACTTGTGAAAACGCCGCCGGGTGGTCTGTTACAATCTGTTGATTTACATCCGGCGATAAAAGCCCTGAAAGATGAGTGA", - "dna_sequence_length": 1848, - "functions": [ - "methyl-directed mismatch repair protein" - ], - "id": "CDS_4089", - "location": [ - [ - "NC_000913", - 4397412, - "+", - 1848 - ] - ], - "md5": "601a0e807dd8f75f22d3283c61c750ee", - "parent_gene": "", - "protein_md5": "cc0b2101ac2383888b6f2403b33495c2", - "protein_translation": "MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAWQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQLETPLPLDDEPQPAPRSIPENRVAAGRNHFAEPAAREPVAPRYTPAPASGSRPAAPWPNAQPGYQKQQGEVYRQLLQTPAPMQKLKAPEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLSLPVAERWLRQAQLTPGEAPVCAQPLLIPLRLKVSAEEKSALEKAQSALAELGIDFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAKQSVFEPGNIAQWIARNLMSEHAQWSMAQAITLLADVERLCPQLVKTPPGGLLQSVDLHPAIKALKDE", - "protein_translation_length": 615, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948690" - ], - [ - "gene_synonym", - "miaA" - ], - [ - "gene_synonym", - "NP_418592.1" - ], - [ - "gene_synonym", - "JW4129" - ], - [ - "gene_synonym", - "b4171" - ], - [ - "gene_synonym", - "GI:16131993" - ], - [ - "gene_synonym", - "ECK4167" - ], - [ - "gene_synonym", - "EcoGene:EG10595" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P16384" - ], - [ - "gene_synonym", - "ASAP:ABE-0013657" - ], - [ - "gene_synonym", - "trpX" - ] - ], - "dna_sequence": "ATGAGTGATATCAGTAAGGCGAGCCTGCCTAAGGCGATTTTTTTGATGGGGCCGACGGCCTCCGGTAAAACGGCGTTAGCCATTGAGCTGCGTAAAATTTTACCAGTAGAGTTGATAAGCGTTGATTCTGCCCTTATTTACAAAGGGATGGATATCGGGACGGCGAAGCCGAACGCTGAAGAGTTACTCGCCGCGCCGCACCGATTGCTGGATATTCGCGATCCGTCGCAGGCTTACTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTATTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGATGTGGTCTTACCTTGAAGGCGAAATCTCATACGATGAAATGGTTTATCGAGGTGTTTGCGCCACGAGACAGTTGGCGAAGCGGCAGATAACCTGGCTGCGTGGTTGGGAAGGGGTTCACTGGCTTGACAGTGAAAAACCAGAACAGGCGCGTGACGAAGTATTACAGGTTGTTGGTGCTATCGCAGGCTGA", - "dna_sequence_length": 951, - "functions": [ - "delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase" - ], - "id": "CDS_4090", - "location": [ - [ - "NC_000913", - 4399252, - "+", - 951 - ] - ], - "md5": "0c70c58555c861eb296e8d868ffc88e2", - "parent_gene": "", - "protein_md5": "8e358f58a28e9ec776e56694d4714216", - "protein_translation": "MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIAG", - "protein_translation_length": 316, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW4130" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6X3" - ], - [ - "gene_synonym", - "hfq" - ], - [ - "gene_synonym", - "NP_418593.1" - ], - [ - "gene_synonym", - "GeneID:948689" - ], - [ - "gene_synonym", - "ASAP:ABE-0013659" - ], - [ - "gene_synonym", - "b4172" - ], - [ - "gene_synonym", - "GI:16131994" - ], - [ - "gene_synonym", - "ECK4168" - ], - [ - "gene_synonym", - "EcoGene:EG10438" - ] - ], - "dna_sequence": "ATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCACGCGATTTCTACTGTTGTCCCGTCTCGCCCGGTTTCTCATCACAGTAACAACGCCGGTGGCGGTACCAGCAGTAACTACCATCATGGTAGCAGCGCGCAGAATACTTCCGCGCAACAGGACAGCGAAGAAACCGAATAA", - "dna_sequence_length": 309, - "functions": [ - "global sRNA chaperone", - "HF-I, host factor for RNA phage Q beta replication" - ], - "id": "CDS_4091", - "location": [ - [ - "NC_000913", - 4400288, - "+", - 309 - ] - ], - "md5": "e3213af0a92e9c6f8caa878a080c30e1", - "parent_gene": "", - "protein_md5": "fe3e07d970ca830a34d91a3fa7e4f9e2", - "protein_translation": "MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE", - "protein_translation_length": 102, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW4131" - ], - [ - "gene_synonym", - "hflA" - ], - [ - "gene_synonym", - "GeneID:948688" - ], - [ - "gene_synonym", - "b4173" - ], - [ - "gene_synonym", - "ASAP:ABE-0013661" - ], - [ - "gene_synonym", - "NP_418594.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P25519" - ], - [ - "gene_synonym", - "GI:16131995" - ], - [ - "gene_synonym", - "EcoGene:EG10437" - ], - [ - "gene_synonym", - "ECK4169" - ], - [ - "gene_synonym", - "hslX" - ], - [ - "gene_synonym", - "hflX" - ] - ], - "dna_sequence": "TTGTTTGACCGTTATGATGCTGGTGAGCAGGCGGTACTGGTACACATCTATTTTACGCAAGACAAAGATATGGAAGACCTCCAGGAGTTTGAATCTCTGGTCTCTTCCGCCGGTGTCGAAGCATTGCAGGTGATTACCGGTAGCCGTAAAGCGCCGCACCCAAAGTATTTTGTAGGTGAAGGTAAAGCAGTTGAAATTGCGGAAGCTGTCAAAGCGACGGGTGCTTCGGTCGTTCTTTTTGACCATGCCCTGAGCCCGGCGCAAGAGCGTAACCTGGAGCGTTTGTGCGAGTGTCGTGTTATCGACCGCACCGGCCTTATTTTAGATATTTTCGCCCAACGTGCGCGTACCCATGAGGGTAAGTTGCAGGTTGAGCTGGCGCAGCTGCGCCATCTGGCTACGCGCCTGGTGCGTGGCTGGACCCACCTTGAAAGACAGAAAGGCGGGATAGGTTTGCGTGGTCCGGGTGAAACCCAGCTCGAAACCGACCGTCGTTTGTTGCGTAATCGCATCGTGCAGATACAGTCGCGCCTGGAAAGAGTTGAAAAGCAGCGTGAGCAGGGGCGGCAATCGCGTATCAAAGCCGACGTTCCTACTGTTTCGCTGGTGGGATATACCAACGCCGGTAAATCTACCCTTTTCAATCGCATCACCGAAGCGCGGGTCTACGCGGCAGACCAGTTGTTTGCCACCCTCGACCCGACGTTGCGGCGTATTGACGTTGCAGATGTCGGTGAAACCGTACTTGCAGATACCGTAGGGTTTATTCGCCACCTGCCGCACGATCTGGTGGCGGCATTTAAAGCCACGTTACAAGAGACGCGGCAAGCCACATTACTGCTGCACGTCATTGATGCGGCGGATGTGCGTGTACAAGAAAACATCGAAGCGGTGAATACGGTTCTTGAAGAGATCGACGCTCACGAGATCCCAACCCTGCTGGTGATGAACAAGATCGATATGCTGGAAGATTTCGAACCGCGTATTGATCGGGACGAAGAGAACAAACCGAACCGTGTCTGGCTTTCCGCACAGACCGGAGCGGGGATACCACAGCTTTTTCAGGCTTTGACGGAGCGGCTTTCCGGCGAGGTGGCGCAGCATACATTGCGTCTGCCACCGCAGGAAGGGCGTCTGAGAAGTCGTTTTTATCAGCTTCAGGCAATAGAAAAAGAGTGGATGGAGGAGGACGGCAGCGTAAGTCTGCAAGTTCGTATGCCGATCGTTGACTGGCGTCGCCTCTGTAAACAAGAACCGGCGTTGATCGATTACCTGATCTAA", 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"gene_synonym", - "UniProtKB/Swiss-Prot:P0ABC7" - ], - [ - "gene_synonym", - "GI:16131996" - ], - [ - "gene_synonym", - "hflK" - ], - [ - "gene_synonym", - "ASAP:ABE-0013663" - ], - [ - "gene_synonym", - "b4174" - ], - [ - "gene_synonym", - "hslY" - ], - [ - "gene_synonym", - "EcoGene:EG10436" - ], - [ - "gene_synonym", - "ECK4170" - ], - [ - "gene_synonym", - "NP_418595.1" - ] - ], - "dna_sequence": "ATGGCGTGGAATCAGCCCGGTAATAACGGACAAGACCGCGACCCGTGGGGAAGCAGCAAACCTGGCGGCAACTCTGAGGGAAATGGAAACAAAGGCGGTCGCGATCAAGGGCCACCTGATTTAGATGATATCTTCCGCAAACTGAGCAAAAAGCTCGGTGGTCTGGGCGGCGGTAAAGGCACCGGATCTGGCGGTGGCAGTTCATCGCAAGGCCCGCGCCCGCAGCTTGGCGGTCGTGTCGTTACCATCGCAGCGGCAGCGATTGTCATTATCTGGGCGGCCAGTGGTTTCTATACCATTAAAGAAGCCGAACGCGGCGTGGTAACACGCTTTGGTAAATTCAGCCATCTGGTTGAGCCGGGTCTGAACTGGAAACCGACGTTTATCGACGAAGTCAAACCGGTGAACGTGGAAGCCGTGCGTGAACTGGCCGCTTCTGGTGTGATGCTGACGTCGGACGAGAACGTAGTGCGCGTTGAGATGAACGTGCAGTACCGCGTCACCAATCCGGAAAAATATCTGTATAGCGTGACCAGCCCGGATGACAGCCTGCGTCAGGCTACCGACAGCGCCCTGCGTGGAGTTATCGGTAAATACACCATGGACCGCATTCTGACGGAAGGTCGTACCGTGATTCGTAGCGATACTCAGCGCGAACTGGAAGAGACGATTCGTCCGTATGACATGGGTATCACGCTGCTGGACGTCAACTTCCAGGCTGCTCGTCCGCCGGAAGAAGTAAAAGCGGCGTTTGACGATGCGATTGCCGCGCGTGAAAACGAACAGCAATACATTCGTGAAGCAGAAGCGTATACCAACGAAGTTCAGCCGCGTGCGAACGGTCAGGCGCAACGTATCCTCGAAGAGGCGCGTGCGTACAAGGCCCAGACCATCCTGGAAGCTCAGGGTGAAGTGGCGCGCTTTGCTAAACTTCTGCCGGAATATAAAGCCGCGCCGGAAATTACTCGCGAGCGTCTGTATATCGAGACGATGGAAAAAGTGTTGGGTAACACCCGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGGACCAACGCCGCGCCAACGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAA", 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"GeneID:948697" - ], - [ - "gene_synonym", - "hflA" - ], - [ - "gene_synonym", - "GI:16131997" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABC3" - ], - [ - "gene_synonym", - "ASAP:ABE-0013665" - ], - [ - "gene_synonym", - "b4175" - ], - [ - "gene_synonym", - "EcoGene:EG10435" - ], - [ - "gene_synonym", - "ECK4171" - ] - ], - "dna_sequence": "ATGCGTAAGTCAGTTATCGCGATTATCATCATCGTGCTGGTAGTGCTTTACATGTCTGTCTTTGTCGTCAAAGAAGGTGAGCGCGGTATTACGCTGCGTTTTGGTAAGGTACTGCGTGACGATGACAACAAACCTCTGGTTTATGAGCCGGGTCTGCATTTCAAGATACCGTTCATTGAAACGGTGAAAATGCTCGACGCACGTATTCAGACCATGGACAACCAGGCCGACCGCTTTGTGACCAAAGAGAAGAAAGACCTGATCGTCGACTCTTACATCAAATGGCGCATCAGCGATTTCAGCCGTTACTACCTGGCAACGGGTGGTGGCGACATTTCGCAAGCGGAAGTGCTGTTGAAACGTAAGTTCTCTGACCGTCTGCGTTCTGAAATTGGTCGCCTGGACGTGAAAGATATCGTCACCGATTCCCGTGGTCGTCTGACCCTCGAAGTACGTGACGCGCTGAACTCCGGTTCTGCGGGTACAGAAGATGAAGTTACTACCCCGGCGGCAGATAACGCCATTGCCGAAGCGGCAGAGCGCGTAACGGCTGAGACGAAGGGCAAAGTTCCGGTCATCAACCCGAACAGTATGGCGGCGCTGGGTATTGAAGTTGTCGATGTGCGTATCAAGCAGATCAACCTGCCGACCGAAGTGTCTGAAGCGATCTACAACCGTATGCGCGCCGAGCGTGAAGCGGTAGCGCGTCGTCACCGTTCACAAGGTCAGGAAGAAGCGGAAAAACTGCGCGCGACTGCCGACTATGAAGTGACCAGAACGCTGGCAGAAGCTGAGCGTCAGGGCCGCATCATGCGTGGTGAAGGCGATGCCGAAGCAGCCAAACTGTTTGCTGATGCATTCAGTAAAGATCCGGACTTCTACGCATTCATCCGTAGCCTGCGTGCTTATGAGAACAGCTTCTCTGGCAATCAGGACGTGATGGTCATGAGCCCGGATAGCGATTTCTTCCGCTACATGAAGACGCCGACTTCCGCAACGCGTTAA", - "dna_sequence_length": 1005, - "functions": [ - "HflB protease modulator specific for phage lambda cII repressor" - ], - "id": "CDS_4094", - "location": [ - [ - "NC_000913", - 4403300, - "+", - 1005 - ] - ], - "md5": "481d24465bca4d0d3bfecf4678d12c95", - "parent_gene": "", - "protein_md5": "215d629d08578afa7c3679e091d4fd50", - "protein_translation": "MRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNKPLVYEPGLHFKIPFIETVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSRYYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSAGTEDEVTTPAADNAIAEAAERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTEVSEAIYNRMRAEREAVARRHRSQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGDAEAAKLFADAFSKDPDFYAFIRSLRAYENSFSGNQDVMVMSPDSDFFRYMKTPTSATR", - "protein_translation_length": 334, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjeT" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF73" - ], - [ - "gene_synonym", - "JW4134" - ], - [ - "gene_synonym", - "GeneID:948696" - ], - [ - "gene_synonym", - "EcoGene:EG12482" - ], - [ - "gene_synonym", - "NP_418597.1" - ], - [ - "gene_synonym", - "b4176" - ], - [ - "gene_synonym", - "ASAP:ABE-0013669" - ], - [ - "gene_synonym", - "GI:16131998" - ], - [ - "gene_synonym", - "ECK4172" - ] - ], - "dna_sequence": "ATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGCCCGATAATATTTTACGTCGTTTTGGCGGTGGACTTGTGGTTGCGGGCGTTGTGGTCTACTACATGTTGAGGAAAACGATTGGCTGA", - "dna_sequence_length": 198, - "functions": [ - "DUF2065 family protein" - ], - "id": "CDS_4095", - "location": [ - [ - "NC_000913", - 4404386, - "+", - 198 - ] - ], - "md5": "e911adc8614a6527cf467961a9517b97", - "parent_gene": "", - "protein_md5": "50ba39a5e7587e96d30d0fca5fd4db4b", - "protein_translation": "MNSTIWLALALVLVLEGLGPMLYPKAWKKMISAMTNLPDNILRRFGGGLVVAGVVVYYMLRKTIG", - "protein_translation_length": 65, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948695" - ], - [ - "gene_synonym", - "JW4135" - ], - [ - "gene_synonym", - "NP_418598.1" - ], - [ - "gene_synonym", - "EcoGene:EG10790" - ], - [ - "gene_synonym", - "ASAP:ABE-0013672" - ], - [ - "gene_synonym", - "purA" - ], - [ - "gene_synonym", - "b4177" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7D4" - ], - [ - "gene_synonym", - "GI:16131999" - ], - [ - "gene_synonym", - "ECK4173" - ] - ], - "dna_sequence": "ATGGGTAACAACGTCGTCGTACTGGGCACCCAATGGGGTGACGAAGGTAAAGGTAAGATCGTCGATCTTCTGACTGAACGGGCTAAATATGTTGTACGCTACCAGGGCGGTCACAACGCAGGCCATACTCTCGTAATCAACGGTGAAAAAACCGTTCTCCATCTTATTCCATCAGGTATTCTCCGCGAGAATGTAACCAGCATCATCGGTAACGGTGTTGTGCTGTCTCCGGCCGCGCTGATGAAAGAGATGAAAGAACTGGAAGACCGTGGCATCCCCGTTCGTGAGCGTCTGCTGCTGTCTGAAGCATGTCCGCTGATCCTTGATTATCACGTTGCGCTGGATAACGCGCGTGAGAAAGCGCGTGGCGCGAAAGCGATCGGCACCACCGGTCGTGGTATCGGGCCTGCTTATGAAGATAAAGTAGCACGTCGCGGTCTGCGTGTTGGCGACCTTTTCGACAAAGAAACCTTCGCTGAAAAACTGAAAGAAGTGATGGAATATCACAACTTCCAGTTGGTTAACTACTACAAAGCTGAAGCGGTTGATTACCAGAAAGTTCTGGATGATACGATGGCTGTTGCCGACATCCTGACTTCTATGGTGGTTGACGTTTCTGACCTGCTCGACCAGGCGCGTCAGCGTGGCGATTTCGTCATGTTTGAAGGTGCGCAGGGTACGCTGCTGGATATCGACCACGGTACTTATCCGTACGTAACTTCTTCCAACACCACTGCTGGTGGCGTGGCGACCGGTTCCGGCCTGGGCCCGCGTTATGTTGATTACGTTCTGGGTATCCTCAAAGCTTACTCCACTCGTGTAGGTGCAGGTCCGTTCCCGACCGAACTGTTTGATGAAACTGGCGAGTTCCTCTGCAAGCAGGGTAACGAATTCGGCGCAACTACGGGGCGTCGTCGTCGTACCGGCTGGCTGGACACCGTTGCCGTTCGTCGTGCGGTACAGCTGAACTCCCTGTCTGGCTTCTGCCTGACTAAACTGGACGTTCTGGATGGCCTGAAAGAGGTTAAACTCTGCGTGGCTTACCGTATGCCGGATGGTCGCGAAGTGACTACCACTCCGCTGGCAGCTGACGACTGGAAAGGTGTAGAGCCGATTTACGAAACCATGCCGGGCTGGTCTGAATCCACCTTCGGCGTGAAAGATCGTAGCGGCCTGCCGCAGGCGGCGCTGAACTATATCAAGCGTATTGAAGAGCTGACTGGTGTGCCGATCGATATCATCTCTACCGGTCCGGATCGTACTGAAACCATGATTCTGCGCGACCCGTTCGACGCGTAA", - "dna_sequence_length": 1299, - "functions": [ - "adenylosuccinate synthetase" - ], - "id": "CDS_4096", - "location": [ - [ - "NC_000913", - 4404687, - "+", - 1299 - ] - ], - "md5": "e7577f44a9dad71c7b031ea8f482007b", - "parent_gene": "", - "protein_md5": "c75382fff9ecc0ede3bf989eaa3734cf", - "protein_translation": "MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLVINGEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA", - "protein_translation_length": 432, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948693" - ], - [ - "gene_synonym", - "NP_418599.1" - ], - [ - "gene_synonym", - "JW4136" - ], - [ - "gene_synonym", - "GI:16132000" - ], - [ - "gene_synonym", - "yjeB" - ], - [ - "gene_synonym", - "ASAP:ABE-0013676" - ], - [ - "gene_synonym", - "ECK4174" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF63" - ], - [ - "gene_synonym", - "b4178" - ], - [ - "gene_synonym", - "EcoGene:EG11212" - ], - [ - "gene_synonym", - "nsrR" - ] - ], - "dna_sequence": "GTGCAGTTAACGAGTTTCACTGATTACGGATTACGTGCGCTGATCTACATGGCGTCATTGCCAGAAGGGCGGATGACCAGTATTTCTGAAGTGACTGACGTCTACGGCGTCTCCCGTAATCATATGGTCAAAATAATCAATCAACTTAGTCGTGCCGGCTACGTGACTGCTGTTCGTGGAAAAAATGGCGGCATTCGCCTGGGTAAACCGGCGAGTGCGATACGTATTGGTGATGTGGTGCGCGAGCTGGAGCCCTTATCGCTGGTGAATTGCAGCAGTGAGTTTTGCCACATTACACCTGCCTGTAGGTTGAAACAGGCACTTTCTAAGGCCGTGCAAAGTTTTCTTACGGAACTGGATAACTACACGCTTGCCGATTTGGTTGAAGAGAATCAACCGCTTTATAAATTATTGCTGGTGGAGTGA", - "dna_sequence_length": 426, - "functions": [ - "nitric oxide-sensitive repressor for NO regulon" - ], - "id": "CDS_4097", - "location": [ - [ - "NC_000913", - 4406190, - "+", - 426 - ] - ], - "md5": "66613431f045d5e995e443acf81e6058", - "parent_gene": "", - "protein_md5": "26784dc35c190b306c0852d4debc0ef8", - "protein_translation": "MQLTSFTDYGLRALIYMASLPEGRMTSISEVTDVYGVSRNHMVKIINQLSRAGYVTAVRGKNGGIRLGKPASAIRIGDVVRELEPLSLVNCSSEFCHITPACRLKQALSKAVQSFLTELDNYTLADLVEENQPLYKLLLVE", - "protein_translation_length": 141, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P21499" - ], - [ - "gene_synonym", - "EcoGene:EG11259" - ], - [ - "gene_synonym", - "GI:90111698" - ], - [ - "gene_synonym", - "GeneID:948692" - ], - [ - "gene_synonym", - "yjeC" - ], - [ - "gene_synonym", - "ECK4175" - ], - [ - "gene_synonym", - "vacB" - ], - [ - "gene_synonym", - "rnr" - ], - [ - "gene_synonym", - "b4179" - ], - [ - "gene_synonym", - "ASAP:ABE-0013678" - ], - [ - "gene_synonym", - "JW5741" - ], - [ - "gene_synonym", - "NP_418600.4" - ] - ], - "dna_sequence": "ATGTCACAAGATCCTTTCCAGGAACGCGAAGCTGAAAAATACGCGAATCCCATCCCTAGTCGGGAATTTATCCTCGAACATTTAACCAAACGTGAAAAACCGGCCAGCCGTGATGAGCTGGCGGTAGAACTGCACATTGAAGGCGAAGAGCAGCTTGAAGGCCTGCGTCGCCGCCTGCGCGCGATGGAGCGCGATGGTCAACTGGTCTTCACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCCGCTGGGTGCTGACCGTAAAGGTCGTCGTGAAGCGCGTATTGTCCGCGTACTGGTGCCAAAAACCAGCCAGATTGTTGGTCGCTACTTTACCGAAGCGGGCGTCGGCTTTGTGGTTCCTGACGACAGCCGTCTGAGCTTCGATATCTTAATCCCGCCCGATCAGATCATGGGCGCGCGGATGGGCTTTGTGGTCGTAGTCGAACTGACTCAGCGTCCGACTCGCCGCACCAAAGCGGTGGGTAAAATCGTCGAAGTGCTGGGCGACAATATGGGCACCGGCATGGCGGTTGATATCGCTCTGCGTACCCATGAAATTCCGTACATCTGGCCGCAGGCTGTTGAGCAACAGGTTGCCGGGCTGAAAGAAGAAGTGCCGGAAGAAGCAAAAGCGGGCCGTGTTGATCTGCGCGATTTACCGCTGGTCACCATTGATGGCGAAGACGCCCGTGACTTTGACGATGCAGTTTACTGCGAGAAAAAACGCGGCGGCGGCTGGCGTTTATGGGTCGCGATTGCCGACGTCAGCTACTATGTGCGTCCGTCAACGCCGCTGGACAGAGAAGCGCGTAACCGTGGCACGTCGGTGTACTTCCCTTCGCAGGTTATCCCGATGCTGCCGGAAGTGCTCTCTAACGGCCTGTGTTCGCTCAACCCGCAGGTAGACCGCCTGTGTATGGTGTGCGAGATGACGGTTTCGTCGAAAGGCCGCCTGACGGGCTACAAATTCTACGAAGCGGTGATGAGCTCTCACGCGCGTCTGACCTACACCAAAGTCTGGCATATTCTGCAGGGCGATCAGGATCTGCGCGAGCAGTACGCCCCGCTGGTTAAGCATCTCGAAGAGTTGCATAACCTCTATAAAGTGCTGGATAAAGCCCGTGAAGAACGCGGTGGGATCTCATTTGAGAGCGAAGAAGCGAAGTTCATTTTCAACGCTGAACGCCGTATTGAACGTATCGAACAGACCCAGCGTAACGACGCGCACAAATTAATTGAAGAGTGCATGATTCTGGCGAATATCTCGGCGGCGCGTTTCGTTGAGAAAGCGAAAGAACCGGCACTGTTCCGTATTCACGACAAGCCGAGCACCGAAGCGATTACCTCTTTCCGTTCAGTGCTGGCGGAGCTGGGGCTGGAACTGCCGGGCGGTAACAAGCCGGAACCGCGTGACTACGCGGAGCTGCTGGAGTCGGTTGCCGATCGTCCTGATGCAGAAATGCTGCAAACCATGCTGCTGCGCTCGATGAAACAGGCGATTTACGATCCAGAAAACCGTGGTCACTTTGGCCTGGCATTGCAGTCCTATGCGCACTTTACTTCGCCGATTCGTCGTTATCCAGACCTGACGCTGCACCGCGCCATTAAATATCTGCTGGCGAAAGAGCAGGGGCATCAGGGCAACACCACTGAAACCGGCGGCTACCATTATTCGATGGAAGAGATGCTGCAACTGGGTCAGCACTGTTCGATGGCGGAACGTCGTGCCGACGAAGCAACGCGCGATGTGGCTGACTGGCTGAAGTGTGACTTCATGCTCGACCAGGTAGGTAACGTCTTTAAAGGCGTAATTTCCAGCGTCACTGGCTTTGGCTTCTTCGTCCGTCTGGACGACTTGTTCATTGATGGTCTGGTCCATGTCTCTTCGCTGGACAATGACTACTATCGCTTTGACCAGGTAGGGCAACGCCTGATGGGGGAATCCAGCGGCCAGACTTATCGCCTGGGCGATCGCGTGGAAGTTCGCGTCGAAGCGGTTAATATGGACGAGCGCAAAATCGACTTTAGCCTGATCTCCAGCGAACGCGCACCGCGCAACGTCGGTAAAACGGCGCGCGAGAAAGCGAAAAAAGGCGATGCAGGTAAAAAAGGCGGCAAGCGTCGTCAGGTCGGTAAAAAGGTAAACTTTGAGCCAGACAGCGCCTTCCGCGGTGAGAAAAAAACGAAGCCGAAAGCGGCGAAGAAAGACGCGAGAAAAGCGAAAAAGCCATCGGCGAAAACGCAGAAAATAGCTGCAGCGACCAAAGCGAAGCGTGCGGCGAAGAAAAAAGTGGCAGAGTGA", 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"MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAVELHIEGEEQLEGLRRRLRAMERDGQLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLRVEGRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTEAGVGFVVPDDSRLSFDILIPPDQIMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTGMAVDIALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPSTPLDREARNRGTSVYFPSQVIPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTYTKVWHILQGDQDLREQYAPLVKHLEELHNLYKVLDKAREERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAKEPALFRIHDKPSTEAITSFRSVLAELGLELPGGNKPEPRDYAELLESVADRPDAEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLTLHRAIKYLLAKEQGHQGNTTETGGYHYSMEEMLQLGQHCSMAERRADEATRDVADWLKCDFMLDQVGNVFKGVISSVTGFGFFVRLDDLFIDGLVHVSSLDNDYYRFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGKTAREKAKKGDAGKKGGKRRQVGKKVNFEPDSAFRGEKKTKPKAAKKDARKAKKPSAKTQKIAAATKAKRAAKKKVAE", - "protein_translation_length": 813, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjfH" - ], - [ - "gene_synonym", - "GeneID:948694" - ], - [ - "gene_synonym", - "NP_418601.1" - ], - [ - "gene_synonym", - "JW4138" - ], - [ - "gene_synonym", - "GI:16132002" - ], - [ - "gene_synonym", - "EcoGene:EG12483" - ], - [ - "gene_synonym", - "rlmB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P63177" - ], - [ - "gene_synonym", - "b4180" - ], - [ - "gene_synonym", - "ECK4176" - ], - [ - "gene_synonym", - "ASAP:ABE-0013684" - ] - ], - "dna_sequence": "ATGAGCGAAATGATTTACGGCATCCACGCAGTGCAGGCCCTGCTGGAGCGCGCCCCTGAACGTTTTCAGGAAGTCTTTATTTTAAAAGGCCGTGAAGATAAACGTCTGTTACCGCTGATTCACGCCCTTGAGTCTCAGGGCGTGGTTATCCAGTTGGCAAACCGCCAATATCTCGACGAGAAAAGCGACGGTGCCGTGCATCAGGGCATTATCGCCCGCGTGAAGCCAGGACGTCAGTATCAGGAAAACGATCTGCCGGATCTGATCGCTTCGCTCGATCAACCGTTCCTGCTGATCCTCGACGGCGTAACCGATCCGCACAACCTCGGCGCGTGCCTGCGTAGTGCGGACGCCGCAGGCGTTCATGCGGTGATTGTGCCGAAAGATCGCTCCGCACAGCTCAACGCTACGGCGAAAAAAGTAGCCTGCGGCGCGGCAGAAAGCGTTCCGCTGATTCGGGTGACTAACCTTGCGCGCACCATGCGTATGTTGCAGGAAGAGAATATCTGGATCGTCGGTACGGCAGGCGAGGCGGATCATACACTCTATCAGAGCAAAATGACCGGACGCCTGGCGCTGGTGATGGGTGCGGAAGGTGAAGGTATGCGTCGCCTGACTCGTGAACATTGCGATGAGTTGATCAGCATCCCGATGGCTGGAAGCGTTTCTTCCCTGAACGTTTCGGTTGCGACCGGAATTTGCTTATTTGAAGCGGTGCGCCAGCGCAGCTAA", - "dna_sequence_length": 732, - "functions": [ - "23S rRNA mG2251 2'-O-ribose methyltransferase, SAM-dependent" - ], - "id": "CDS_4099", - "location": [ - [ - "NC_000913", - 4409275, - "+", - 732 - ] - ], - "md5": "36322577a8dabf728a347f071e41e12b", - "parent_gene": "", - "protein_md5": "408cf5369cfd018aab68e18204ca5547", - "protein_translation": "MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS", - "protein_translation_length": 243, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjfI" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF76" - ], - [ - "gene_synonym", - "NP_418602.1" - ], - [ - "gene_synonym", - "JW4139" - ], - [ - "gene_synonym", - "GI:16132003" - ], - [ - "gene_synonym", - "EcoGene:EG12484" - ], - [ - "gene_synonym", - "b4181" - ], - [ - "gene_synonym", - "GeneID:948704" - ], - [ - "gene_synonym", - "ECK4177" - ], - [ - "gene_synonym", - "ASAP:ABE-0013687" - ] - ], - "dna_sequence": "ATGACATGGAATCCGTTGGCGCTAGCGACGGCGCTGCAAACTGTACCTGAACAAAATATTGATGTAACAAATAGCGAGAACGCATTAATTATTAAAATGAATGATTATGGCGATTTGCAAATCAATATTCTTTTTACTTCCCGCCAAATGATTATCGAAACCTTTATTTGTCCGGTGAGTAGTATCAGCAATCCAGATGAATTTAATACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAA", - "dna_sequence_length": 402, - "functions": [ - "DUF2170 family protein" - ], - "id": "CDS_4100", - "location": [ - [ - "NC_000913", - 4410133, - "+", - 402 - ] - ], - "md5": "88771f3283c428ccd0f02e7ab956629b", - "parent_gene": "", - "protein_md5": "355b706ff4325d4dc11f810247702ba4", - "protein_translation": "MTWNPLALATALQTVPEQNIDVTNSENALIIKMNDYGDLQINILFTSRQMIIETFICPVSSISNPDEFNTFLLRNQKMMPLSSVGISSVQQEEYYIVFGALSLKSSLEDILLEITSLVDNALDLAEITEEYSH", - "protein_translation_length": 133, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjfJ" - ], - [ - "gene_synonym", - "GI:16132004" - ], - [ - "gene_synonym", - "EcoGene:EG12485" - ], - [ - "gene_synonym", - "GeneID:948703" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF78" - ], - [ - "gene_synonym", - "b4182" - ], - [ - "gene_synonym", - "ASAP:ABE-0013689" - ], - [ - "gene_synonym", - "ECK4178" - ], - [ - "gene_synonym", - "NP_418603.1" - ], - [ - "gene_synonym", - "JW4140" - ] - ], - "dna_sequence": "ATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAGCATATTCGTGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGAAATTAAGTCACGATAAGCTGAAAGATTTACGTGAGCGCAAAGCCAGTCTGGAAGCCCGTGCGCTGGAAGCGTTAAGCAAGAACGTTAATCCGTCGTTGATTAACGAAGTTGCTGAAGAAATCGCGCGCCTTGAGAATCTCATTACCGCTGAAGAGCAAGTGTTGTCGAATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAACGCCTGCAAACGCGTCAGGCCGAACGTCAGGCTCGCCTGGATGCTGCCGCACAGTTGGAGAAAGTCGCAGACGGTCGCGACCTTGACGAAAAGCTGGCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAA", - "dna_sequence_length": 699, - "functions": [ - "PspA/IM30 family protein" - ], - "id": "CDS_4101", - "location": [ - [ - "NC_000913", - 4410553, - "+", - 699 - ] - ], - "md5": "f10281a1296cbedc2d32ae00c5ff3039", - "parent_gene": "", - "protein_md5": "1a57bb4e9510d192b7cfdbeb63f0fd04", - "protein_translation": "MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDKAGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLENLITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTVGASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSSAQDVLARLQRQQGE", - "protein_translation_length": 232, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjfK" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39293" - ], - [ - "gene_synonym", - "NP_418604.1" - ], - [ - "gene_synonym", - "GeneID:948702" - ], - [ - "gene_synonym", - "EcoGene:EG12486" - ], - [ - "gene_synonym", - "GI:16132005" - ], - [ - "gene_synonym", - "b4183" - ], - [ - "gene_synonym", - "ECK4179" - ], - [ - "gene_synonym", - "JW4141" - ], - [ - "gene_synonym", - "ASAP:ABE-0013692" - ] - ], - "dna_sequence": "ATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGCCGCCGTCAGCCACATCGATCTGGGCGGCGGTAGTCAGATTTTCCGCTACTACACTTCAGGCGATGAGTTTCTGCAAATCAATACCACCGGCGGCGAAGATATTGATGACATTGATGATATCAAGCTCTTTGTCTATGAAGAGAGCTACGGTATCAGTAAAGAGAGTCACTGGCGCGAGGCGATCAACGCCAAAGCGATGGGAGCAATGACCTTAAACTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCGTCTACATGCTGGAAAAAGTAGAAAATCAAAACCATGCCAAATGGGAGGTCCATAATTTTACCATGGGCTACCAACGGCAAGTAACCGAAGATACTTACGAATATTTGCTGCTAAATGGTGAGGAATCTTTTAACGATCTCGGCGAGCCAGAGTGGTTATTTTCGCGCGCGTTGGGTGTCGATATCCCGCTGACATCACTTCATATTATTGGTTAA", - "dna_sequence_length": 660, - "functions": [ - "DUF2491 family protein" - ], - "id": "CDS_4102", - "location": [ - [ - "NC_000913", - 4411302, - "+", - 660 - ] - ], - "md5": "f4c177d5b5792af9ae50ed03da90f546", - "parent_gene": "", - "protein_md5": "cbc23639b77a5f5c666dbfe3a761a41c", - "protein_translation": "MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDELLIALPGEEFTVAAVSHIDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYEESYGISKESHWREAINAKAMGAMTLNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNHAKWEVHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHIIG", - "protein_translation_length": 219, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418605.1" - ], - [ - "gene_synonym", - "yjfL" - ], - [ - "gene_synonym", - "GI:16132006" - ], - [ - "gene_synonym", - "EcoGene:EG12487" - ], - [ - "gene_synonym", - "GeneID:948701" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF80" - ], - [ - "gene_synonym", - "JW4142" - ], - [ - "gene_synonym", - "ECK4180" - ], - [ - "gene_synonym", - "b4184" - ], - [ - "gene_synonym", - "ASAP:ABE-0013694" - ] - ], - "dna_sequence": "ATGCATATACTGGATTCACTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGATTCAGTTACTCGTTTTTGCTGGTGTCAGACTTTATATGCCCGCATTAAGCGAAAAAATTATTAATCACAATACCGCAGCAGGAATGTTTATGGGAACCGCCGCGCTGGCTGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAA", - "dna_sequence_length": 399, - "functions": [ - "UPF0719 family inner membrane protein" - ], - "id": "CDS_4103", - "location": [ - [ - "NC_000913", - 4411979, - "+", - 399 - ] - ], - "md5": "47623a4e7271481bbcff2f3f58342b41", - "parent_gene": "", - "protein_md5": "9aa45ee7f805e22a5ebb8154609c2108", - "protein_translation": "MHILDSLLAFSAYFFIGVAMVIIFLFIYSKITPHNEWQLIKNNNTAASLAFSGTLLGYVIPLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSEKIINHNTAAGMFMGTAALAGGIFNAACMTW", - "protein_translation_length": 132, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39295" - ], - [ - "gene_synonym", - "yjfM" - ], - [ - "gene_synonym", - "GI:16132007" - ], - [ - "gene_synonym", - "EcoGene:EG12488" - ], - [ - "gene_synonym", - "GeneID:948700" - ], - [ - "gene_synonym", - "NP_418606.1" - ], - [ - "gene_synonym", - "JW4143" - ], - [ - "gene_synonym", - "b4185" - ], - [ - "gene_synonym", - "ECK4181" - ], - [ - "gene_synonym", - "ASAP:ABE-0013696" - ] - ], - "dna_sequence": "ATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCGCTACGCACAAAAATACTTAACGTTGGCGCTAATGGGCGGTGCCGCTTTTTTCGTATTGAAAGGTTGTAGCGATAGTAGCGATGTCGATAACGACGGCGACGGAACGTTTTACGCGACAGTGCAGGATTGTATTGATGACGGTAATAATGCCGACATTTGCGCGCGTGGCTGGAACAACGCCAAAACGGCATTTTATGCCGATGTTCCGAAGAATATGACTCAGCAGAACTGTCAGTCTAAGTACGAAAATTGCTACTACGACAATGTTGAACAGAGTTGGATCCCGGTCGTTTCTGGATTTTTGTTAAGCCGGGTTATTCGTAAAGATCGCGATGAGCCGTTTGTTTATAACAGCGGCGGTTCCTCTTTTGCTTCGCGCCCAGTCTGGCGCAGCACTTCTGGTGATTACTCCTGGCGCTCCGGTTCTGGCAAAAAAGAGTCTTACTCTTCGGGCGGCTTTACCACCAAAAAAGCGTCTACCGTTTCTCGCGGCGGCTATGGTCGTTCTTCCAGCGCCCGTGGGCATTGGGGAGGCTAA", - "dna_sequence_length": 639, - "functions": [ - "DUF1190 family protein" - ], - "id": "CDS_4104", - "location": [ - [ - "NC_000913", - 4412387, - "+", - 639 - ] - ], - "md5": "013eb38bbb285c18e4c491edb3da56c0", - "parent_gene": "", - "protein_md5": "1f2f1298eb2531a50e3199b70856aee8", - "protein_translation": "MARKRKSRNNSKIGHGAISRIGRPNNPFEPCRNRYAQKYLTLALMGGAAFFVLKGCSDSSDVDNDGDGTFYATVQDCIDDGNNADICARGWNNAKTAFYADVPKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRPVWRSTSGDYSWRSGSGKKESYSSGGFTTKKASTVSRGGYGRSSSARGHWGG", - "protein_translation_length": 212, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16132008" - ], - [ - "gene_synonym", - "GeneID:948699" - ], - [ - "gene_synonym", - "yjfC" - ], - [ - "gene_synonym", - "NP_418607.1" - ], - [ - "gene_synonym", - "JW4144" - ], - [ - "gene_synonym", - "b4186" - ], - [ - "gene_synonym", - "ASAP:ABE-0013698" - ], - [ - "gene_synonym", - "ECK4182" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33222" - ], - [ - "gene_synonym", - "EcoGene:EG11812" - ] - ], - "dna_sequence": "ATGCTGAGACACAACGTTCCTGTGCGACGGGATCTGGACCAGATCGCCGCTGACAACGGTTTCGACTTTCATATCATCGACAATGAAATCTATTGGGATGAGAGTCGGGCTTACCGTTTTACTCTGCGCCAGATTGAAGAGCAGATCGAAAAACCGACTGCGGAACTGCATCAGATGTGCCTTGAGGTGGTGGATCGCGCGGTAAAAGATGAAGAGATCCTGACGCAACTGGCGATCCCGCCGTTGTACTGGGATGTGATCGCTGAAAGCTGGCGCGCCCGCGATCCTTCGCTGTATGGACGGATGGATTTTGCCTGGTGTGGCAATGCGCCGGTGAAGCTGCTGGAGTACAACGCCGATACGCCAACTTCATTGTACGAGTCGGCTTATTTCCAGTGGCTGTGGCTGGAGGATGCCCGGCGCAGCGGCATTATTCCGCGTGATGCCGATCAGTACAATGCTATTCAGGAACGCCTGATTTCACGCTTTAGCGAGCTTTACAGTCGGGAACCGTTTTATTTTTGCTGCTGTCAGGACACCGATGAAGACAGGAGTACCGTGCTGTACTTGCAGGACTGCGCCCAGCAGGCAGGGCAGGAGTCGCGGTTTATCTACATTGAAGATCTCGGTTTGGGCGTCGGCGGCGTACTGACCGATCTTGATGATAATGTCATCCAGCGTGCATTTAAGCTGTATCCGCTGGAGTGGATGATGCGTGACGATAACGGTCCGCTGCTGCGCAAGCGTCGCGAGCAATGGGTGGAGCCGTTATGGAAAAGTATCTTGAGTAATAAAGGGCTAATGCCGCTGCTTTGGCGCTTCTTCCCTGGTCATCCTAATCTTCTTGCGTCCTGGTTCGATGGCGAGAAACCGCAGATTGCCGCTGGCGAAAGCTATGTGCGTAAACCAATCTATTCGCGCGAAGGCGGCAACGTCACCATTTTTGACGGCAAGAATAACGTTGTTGACCACGCTGATGGTGATTACGCCGATGAACCGATGATCTACCAGGCGTTTCAACCTCTGCCGCGGTTTGGCGATAGCTACACACTCATCGGTAGCTGGATTGTCGATGATGAAGCGTGCGGAATGGGGATCCGTGAAGATAACACACTGATCACCAAAGACACCTCACGTTTCGTTCCGCATTACATTGCTGGATAA", - "dna_sequence_length": 1164, - "functions": [ - "ATP-Grasp family ATPase" - ], - "id": "CDS_4105", - "location": [ - [ - "NC_000913", - 4413028, - "+", - 1164 - ] - ], - "md5": "06be1c0dcb870a8886608c08d7a6c90e", - "parent_gene": "", - "protein_md5": "527fd550a86e09d27e3f6c7489c4e7d6", - "protein_translation": "MLRHNVPVRRDLDQIAADNGFDFHIIDNEIYWDESRAYRFTLRQIEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRMDFAWCGNAPVKLLEYNADTPTSLYESAYFQWLWLEDARRSGIIPRDADQYNAIQERLISRFSELYSREPFYFCCCQDTDEDRSTVLYLQDCAQQAGQESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRDDNGPLLRKRREQWVEPLWKSILSNKGLMPLLWRFFPGHPNLLASWFDGEKPQIAAGESYVRKPIYSREGGNVTIFDGKNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIREDNTLITKDTSRFVPHYIAG", - "protein_translation_length": 387, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "aidB" - ], - [ - "gene_synonym", - "ASAP:ABE-0013701" - ], - [ - "gene_synonym", - "GeneID:948710" - ], - [ - "gene_synonym", - "GI:162135915" - ], - [ - "gene_synonym", - "JW5867" - ], - [ - "gene_synonym", - "b4187" - ], - [ - "gene_synonym", - "ECK4183" - ], - [ - "gene_synonym", - "EcoGene:EG11811" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33224" - ], - [ - "gene_synonym", - "NP_418608.6" - ] - ], - "dna_sequence": "GTGCACTGGCAAACTCACACCGTTTTTAATCAACCTATACCATTAAATAACAGCAACTTATACCTGTCTGATGGCGCGCTCTGCGAAGCGGTAACGCGTGAAGGTGCTGGCTGGGATAGCGATTTTCTAGCCAGTATTGGTCAGCAGTTAGGAACGGCTGAATCCCTTGAACTGGGGCGGCTGGCGAATGTGAATCCGCCTGAATTATTGCGCTACGATGCGCAAGGACGCCGTCTGGACGATGTGCGTTTTCACCCCGCCTGGCACCTGCTGATGCAGGCGCTATGTACCAATCGGGTGCACAATCTTGCCTGGGAAGAAGACGCTCGCTCCGGCGCATTTGTGGCGCGCGCGGCGCGTTTTATGTTACATGCGCAGGTTGAGGCAGGGTCGTTATGTCCGATAACCATGACCTTTGCCGCCACGCCATTGTTGTTACAGATGTTACCCGCGCCGTTTCAGGACTGGACCACGCCGCTATTGAGCGATCGCTACGATTCTCACTTATTGCCAGGTGGGCAAAAACGCGGTTTGTTGATTGGCATGGGAATGACGGAAAAGCAGGGCGGTTCCGATGTTATGAGCAACACCACCCGTGCAGAGCGTCTGGAAGATGGCTCTTATCGGCTGGTGGGGCATAAATGGTTTTTCTCGGTTCCGCAAAGCGATGCGCATCTGGTGCTGGCGCAGACCGCGGGTGGTCTGTCCTGCTTTTTTGTGCCGCGCTTTTTGCCTGACGGGCAACGCAACGCGATTCGCCTCGAGCGGCTGAAAGATAAGCTGGGTAATCGCTCTAACGCCAGTTGCGAAGTGGAGTTTCAGGATGCCATTGGTTGGTTGTTGGGGCTGGAAGGGGAAGGAATTCGTCTGATCCTGAAAATGGGTGGGATGACGCGTTTTGATTGCGCCCTGGGTAGCCATGCCATGATGCGCCGTGCATTTTCGCTGGCGATTTATCATGCACATCAACGCCATGTTTTTGGTAATCCATTGATCCAACAGCCCCTTATGCGTCATGTCTTAAGTCGCATGGCACTTCAGCTTGAAGGGCAAACGGCGTTGCTGTTTCGTCTTGCGCGAGCGTGGGACCGGCGTGCCGATGCCAAAGAAGCCCTGTGGGCGCGTTTATTTACGCCTGCGGCAAAATTTGTGATCTGCAAAAGAGGTATGCCGTTTGTGGCCGAAGCGATGGAGGTGCTGGGCGGCATTGGTTATTGCGAGGAGAGTGAGCTGCCGCGGCTTTACCGGGAGATGCCGGTAAACAGTATTTGGGAAGGTTCCGGCAATATTATGTGCCTGGATGTGTTGCGCGTTCTCAATAAGCAAGCGGGCGTATACGACTTATTGTCGGAAGCATTTGTGGAAGTGAAAGGGCAGGATCGCTATTTTGATCGCGCGGTTCGTCGTTTACAGCAGCAGCTGCGTAAGCCAGCTGAAGAACTGGGGCGAGAGATTACTCATCAGCTATTCCTGCTGGGCTGCGGTGCGCAAATGTTGAAATATGCTTCTCCGCCAATGGCGCAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAA", 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"CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjfN" - ], - [ - "gene_synonym", - "EcoGene:EG12521" - ], - [ - "gene_synonym", - "JW5742" - ], - [ - "gene_synonym", - "GI:90111700" - ], - [ - "gene_synonym", - "ECK4184" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF82" - ], - [ - "gene_synonym", - "GeneID:948709" - ], - [ - "gene_synonym", - "b4188" - ], - [ - "gene_synonym", - "ASAP:ABE-0013704" - ], - [ - "gene_synonym", - "NP_418609.4" - ] - ], - "dna_sequence": "ATGAAACAATTACTTGCCTCACCCTCGCTGCAATTAGTGACTTATCCTGCGAGCGCCACGGCACAGTCTGCAGAATTCGCCAGTGCTGACTGCGTGACGGGCCTGAATGAAATAGGTCAGATCTCAGTTAGCAATATTTCAGGGGATCCGCAGGACGTGGAACGTATCGTGGCGTTAAAGGCCGATGAACAAGGTGCGTCATGGTACCGCATTATTACCATGTACGAAGACCAGCAGCCTGATAACTGGCGCGTACAGGCGATACTGTATGCATGA", - "dna_sequence_length": 276, - "functions": [ - "DUF1471 family periplasmic protein" - ], - "id": "CDS_4107", - "location": [ - [ - "NC_000913", - 4416292, - "-", - 276 - ] - ], - "md5": "0f8e10fd7ba727b399bec8242da86953", - "parent_gene": "", - "protein_md5": "aa7e9378acc372795492f11cc4ea8059", - "protein_translation": "MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERIVALKADEQGASWYRIITMYEDQQPDNWRVQAILYA", - "protein_translation_length": 91, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948708" - ], - [ - "gene_synonym", - "yjfO" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39297" - ], - [ - "gene_synonym", - "EcoGene:EG12489" - ], - [ - "gene_synonym", - "ASAP:ABE-0013706" - ], - [ - "gene_synonym", - "ECK4185" - ], - [ - "gene_synonym", - "GI:90111701" - ], - [ - "gene_synonym", - "bsmA" - ], - [ - "gene_synonym", - "NP_418610.4" - ], - [ - "gene_synonym", - "b4189" - ], - [ - "gene_synonym", - "JW5743" - ] - ], - "dna_sequence": "ATGGTTAGCAGGAAACGTAATAGCGTTATTTACCGGTTTGCCAGTTTATTATTGGTGTTGATGTTAAGTGCCTGTAGCGCACTGCAAGGTACGCCACAGCCAGCACCGCCAGTAACGGACCATCCGCAAGAGATTCGCCGCGACCAGACGCAAGGGTTACAGCGAATAGGTAGCGTAAGCACGATGGTTCGGGGTTCTCCGGATGACGCATTAGCAGAAATCAAAGCGAAAGCTGTCGCTGCAAAAGCTGATTATTACGTTGTCGTCATGGTGGACGAAACCATCGTGACAGGACAGTGGTATTCACAAGCCATTTTGTACCGTAAATAA", - "dna_sequence_length": 330, - "functions": [ - "bioflm peroxide resistance protein" - ], - "id": "CDS_4108", - "location": [ - [ - "NC_000913", - 4416770, - "-", - 330 - ] - ], - "md5": "7c7955ceba101dd32182efbba616f3b3", - "parent_gene": "", - "protein_md5": "604c1960ad8625228c6885656109ff24", - "protein_translation": "MVSRKRNSVIYRFASLLLVLMLSACSALQGTPQPAPPVTDHPQEIRRDQTQGLQRIGSVSTMVRGSPDDALAEIKAKAVAAKADYYVVVMVDETIVTGQWYSQAILYRK", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12490" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39298" - ], - [ - "gene_synonym", - "ASAP:ABE-0013711" - ], 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"ATGATTGAAATAGAATCACGCGAGCTGGCAGATATTCCCGTTCTTCATGCTTATCCTGTCGGGCAAAAAGATACCCCGTTACCGTGCGTAATTTTTTATCACGGCTTTACTTCATCCAGTCTGGTGTATAGCTATTTTGCCGTTGCGCTGGCGCAGGCTGGTTTGCGGGTGATCATGCCGGATGCGCCCGATCACGGTAGCCGTTTTAGTGGTGACGCAGCGCGGCGGTTAAATCAATTCTGGCAAATCTTGCTACAAAGTATGCAGGAATTCACTACTTTACGTGCGGCAATAGCCGAAGAAAACTGGCTGCTTGATGACCGTCTGGCAGTCGGTGGCGCGTCGATGGGCGCGATGACGGCACTGGGGATTACCGCTCGCCACCCCACGGTGAGATGTACCGCCAGCATGATGGGATCGGGCTATTTTACATCACTCGCCCGTTCACTGTTTCCACCGCTGATACCTGAAACGGCAGCACAGCAGAATGAATTCAATAACATTGTCGCGCCACTGGCAGAGTGGGAAGCGACAAACCACCTGGAACAACTTAGTGACAGACCTCTACTGCTGTGGCATGGCCTCGACGATGACGTTGTGCCTGCCGACGAATCACTACGTTTGCAGCAGGCCTTAAGCGAGACGGGACGGGATAAACTGCTAACCTGTTCATGGCAGCCAGGCGTGCGTCACCGCATTACGCCTGAGGCGTTAGATGCTGCCGTGACATTTTTCCGCCAGCATCTTTAA", - "dna_sequence_length": 750, - "functions": [ - "acyl CoA esterase" - ], - "id": "CDS_4109", - "location": [ - [ - "NC_000913", - 4416952, - "+", - 750 - ] - ], - "md5": "df559795c88bec096fb7727099b14fc1", - "parent_gene": "", - "protein_md5": "d551b8bf35a08e8ddf0924ffad2c326e", - "protein_translation": "MIEIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYSYFAVALAQAGLRVIMPDAPDHGSRFSGDAARRLNQFWQILLQSMQEFTTLRAAIAEENWLLDDRLAVGGASMGAMTALGITARHPTVRCTASMMGSGYFTSLARSLFPPLIPETAAQQNEFNNIVAPLAEWEATNHLEQLSDRPLLLWHGLDDDVVPADESLRLQQALSETGRDKLLTCSWQPGVRHRITPEALDAAVTFFRQHL", - "protein_translation_length": 249, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12491" - ], - [ - "gene_synonym", - "GeneID:948706" - ], - [ - "gene_synonym", - "NP_418612.1" - ], - [ - "gene_synonym", - "GI:16132013" - ], - [ - "gene_synonym", - "ASAP:ABE-0013713" - ], - [ - "gene_synonym", - "b4191" - ], - [ - "gene_synonym", - "ECK4187" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9W0" - ], - [ - "gene_synonym", - "yjfQ" - ], - [ - "gene_synonym", - "ulaR" - ], - [ - "gene_synonym", - "JW4149" - ] - ], - "dna_sequence": "ATGACTGAAGCACAAAGACATCAAATCCTCCTGGAAATGCTCGCACAATTGGGCTTTGTGACCGTTGAGAAAGTCGTTGAGCGTCTGGGAATTTCGCCTGCCACTGCGCGACGCGATATCAATAAACTTGACGAAAGCGGCAAACTGAAAAAAGTGCGCAATGGCGCAGAAGCTATTACCCAACAGCGCCCGCGCTGGACGCCGATGAATCTGCATCAGGCGCAGAATCACGATGAAAAAGTACGTATCGCTAAAGCGGCCTCGCAGCTGGTTAATCCGGGCGAAAGCGTAGTCATCAACTGCGGCTCCACCGCGTTTCTGCTTGGGCGGGAAATGTGTGGCAAGCCAGTGCAAATCATCACTAATTATCTACCGCTGGCAAATTACCTGATCGATCAAGAACATGACAGCGTGATCATTATGGGCGGACAGTACAACAAAAGTCAGTCCATCACTTTAAGCCCGCAGGGCAGCGAAAACAGTCTCTATGCCGGGCACTGGATGTTTACCAGCGGAAAAGGGCTGACCGCAGAAGGGTTGTATAAAACCGATATGCTGACAGCAATGGCAGAGCAGAAGATGCTGAGCGTGGTAGGGAAACTGGTGGTACTGGTTGATAGCAGTAAGATTGGCGAACGCGCGGGAATGCTTTTTAGCCGTGCCGATCAAATCGATATGCTTATCACCGGCAAAAATGCTAACCCGGAAATCCTGCAACAACTGGAAGCGCAAGGGGTCAGCATTCTGCGTGTTTAA", - "dna_sequence_length": 756, - "functions": [ - "transcriptional repressor for the L-ascorbate utilization divergent operon" - ], - "id": "CDS_4110", - "location": [ - [ - "NC_000913", - 4418453, - "-", - 756 - ] - ], - "md5": "da8f8790669a1b754c19371ee2e9f2d3", - "parent_gene": "", - "protein_md5": "fa6722683dbb832b1c9f0e37fbd9c1a0", - "protein_translation": "MTEAQRHQILLEMLAQLGFVTVEKVVERLGISPATARRDINKLDESGKLKKVRNGAEAITQQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVINCGSTAFLLGREMCGKPVQIITNYLPLANYLIDQEHDSVIIMGGQYNKSQSITLSPQGSENSLYAGHWMFTSGKGLTAEGLYKTDMLTAMAEQKMLSVVGKLVVLVDSSKIGERAGMLFSRADQIDMLITGKNANPEILQQLEAQGVSILRV", - "protein_translation_length": 251, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418613.2" - ], - [ - "gene_synonym", - "ulaG" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39300" - ], - [ - "gene_synonym", - "ASAP:ABE-0013717" - ], - [ - "gene_synonym", - "GI:90111702" - ], - [ - "gene_synonym", - "b4192" - ], - [ - "gene_synonym", - "GeneID:948705" - ], - [ - "gene_synonym", - "yjfR" - ], - [ - "gene_synonym", - "ECK4188" - ], - [ - "gene_synonym", - "JW5868" - ], - [ - "gene_synonym", - "EcoGene:EG12492" - ] - ], - "dna_sequence": "ATGAGTAAAGTGAAAAGTATCACCCGTGAATCCTGGATCCTGAGCACTTTCCCGGAGTGGGGTAGCTGGTTGAATGAAGAAATTGAACAAGAACAGGTCGCTCCTGGCACATTTGCGATGTGGTGGCTTGGCTGCACCGGGATCTGGTTGAAATCGGAAGGTGGCACCAACGTTTGCGTTGATTTCTGGTGCGGCACTGGCAAACAAAGTCACGGTAACCCGTTAATGAAACAGGGTCACCAGATGCAGCGCATGGCTGGCGTGAAAAAACTGCAGCCAAACCTGCGTACCACCCCGTTTGTTCTTGATCCGTTTGCGATTCGCCAGATCGACGCGGTACTGGCGACTCACGATCACAACGATCATATCGACGTTAACGTCGCTGCTGCCGTGATGCAGAATTGTGCAGATGACGTACCGTTTATCGGACCGAAAACCTGTGTGGATTTGTGGATTGGCTGGGGCGTACCGAAAGAGCGTTGCATCGTGGTCAAACCGGGCGATGTAGTAAAAGTGAAAGACATTGAAATTCATGCGCTTGATGCTTTCGACCGTACTGCACTGATCACCCTGCCTGCCGATCAAAAAGCGGCTGGCGTACTGCCAGATGGCATGGACGATCGCGCGGTGAACTACCTGTTCAAAACGCCTGGCGGCTCCCTGTATCACAGCGGCGACTCCCACTACTCTAACTATTATGCGAAGCACGGTAACGAACATCAGATCGACGTGGCGTTAGGATCGTACGGCGAAAACCCGCGCGGTATCACCGACAAAATGACCAGCGCCGATATGCTGCGTATGGGTGAAGCGCTGAATGCGAAAGTAGTGATCCCGTTCCACCACGATATCTGGTCAAACTTCCAGGCCGATCCGCAAGAGATCCGCGTGCTGTGGGAGATGAAAAAAGATCGCCTGAAGTATGGCTTCAAGCCGTTTATCTGGCAGGTGGGTGGCAAATTTACCTGGCCGCTGGATAAAGACAACTTCGAGTACCACTATCCGCGCGGTTTCGATGATTGCTTCACTATTGAACCGGATCTGCCGTTCAAGTCATTCCTGTAA", 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"NP_418614.4" - ], - [ - "gene_synonym", - "b4193" - ], - [ - "gene_synonym", - "GI:90111703" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39301" - ], - [ - "gene_synonym", - "yjfS" - ], - [ - "gene_synonym", - "JW5744" - ], - [ - "gene_synonym", - "ECK4189" - ] - ], - "dna_sequence": "ATGGAGATCCTCTACAACATCTTTACCGTGTTTTTTAACCAGGTCATGACCAATGCCCCGTTGTTGCTGGGTATTGTGACCTGTCTGGGCTACATCCTACTGCGCAAAAGTGTCAGCGTTATTATTAAAGGCACGATTAAAACCATAATTGGTTTCATGTTGTTGCAGGCAGGGTCCGGCATCCTCACCAGCACCTTCAAACCGGTGGTGGCGAAAATGTCCGAAGTCTACGGCATTAACGGCGCAATTTCCGATACCTACGCTTCAATGATGGCAACCATCGACCGCATGGGCGATGCCTATAGCTGGGTGGGTTACGCCGTATTGTTAGCGCTGGCGCTGAACATCTGTTACGTGCTGTTGCGTCGCATTACCGGCATTCGCACAATCATGTTGACCGGCCACATCATGTTCCAGCAGGCCGGGTTGATTGCCGTTACGCTGTTTATCTTCGGCTACTCCATGTGGACCACCATTATCTGTACCGCGATTCTGGTTTCGCTCTACTGGGGCATCACTTCCAACATGATGTACAAGCCGACTCAGGAAGTGACGGATGGCTGTGGTTTCTCCATCGGTCACCAGCAGCAGTTTGCATCATGGATTGCCTATAAAGTCGCGCCGTTCCTCGGCAAAAAAGAGGAGAGCGTTGAAGACCTCAAATTGCCGGGCTGGCTGAACATTTTCCACGACAACATCGTCTCCACGGCGATTGTGATGACCATCTTCTTTGGTGCCATTCTGCTCTCCTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGCACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTTGCGGTGGCGATCTTCATCATCACGCAGGGTGTGCGCATGTTTGTGGCGGAACTCTCTGAAGCATTTAACGGCATTTCCCAGCGCCTGATCCCAGGTGCGGTTCTGGCGATTGACTGTGCAGCTATCTATAGCTTCGCGCCGAACGCCGTGGTCTGGGGCTTTATGTGGGGCACCATCGGTCAGCTGATTGCGGTTGGCATCCTGGTCGCCTGCGGCTCCTCGATCCTGATTATTCCTGGCTTTATCCCGATGTTCTTCTCTAACGCCACCATCGGCGTGTTCGCTAACCACTTCGGCGGCTGGCGTGCGGCGCTGAAGATTTGTCTGGTGATGGGGATGATCGAAATCTTTGGTTGCGTCTGGGCGGTGAAACTCACCGGTATGAGTGCCTGGATGGGCATGGCGGACTGGTCGATTCTGGCACCGCCGATGATGCAAGGCTTCTTCTCCATCGGTATCGCCTTTATGGCCGTCATCATTGTAATTGCACTGGCTTATATGTTCTTCGCTGGCCGCGCGCTGCGCGCAGAAGAAGATGCAGAAAAACAACTGGCAGAACAGTCTGCTTAA", 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"gene_synonym", - "GeneID:948716" - ], - [ - "gene_synonym", - "JW4152" - ], - [ - "gene_synonym", - "ulaB" - ], - [ - "gene_synonym", - "GI:16132016" - ], - [ - "gene_synonym", - "ECK4190" - ], - [ - "gene_synonym", - "ASAP:ABE-0013725" - ], - [ - "gene_synonym", - "b4194" - ], - [ - "gene_synonym", - "sgaB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69822" - ], - [ - "gene_synonym", - "yjfT" - ] - ], - "dna_sequence": "ATGACCGTACGTATTCTGGCTGTGTGTGGCAACGGACAAGGCAGTTCCATGATCATGAAGATGAAAGTGGACCAGTTTTTAACCCAATCAAACATTGACCATACGGTAAACAGCTGCGCGGTTGGCGAGTACAAAAGCGAGTTGAGTGGCGCGGATATCATCATCGCTTCTACGCACATTGCGGGCGAAATCACCGTGACCGGCAACAAATACGTGGTTGGCGTGCGCAACATGCTCTCTCCTGCCGACTTTGGCCCGAAACTGCTGGAAGTGATCAAAGAGCATTTCCCGCAGGATGTGAAGTAA", - "dna_sequence_length": 306, - "functions": [ - "L-ascorbate-specific enzyme IIB component of PTS" - ], - "id": "CDS_4113", - "location": [ - [ - "NC_000913", - 4421393, - "+", - 306 - ] - ], - "md5": "0e22860b32b28e094e5234d1ab48695b", - "parent_gene": "", - "protein_md5": "0373f0dcb85ad5deb6a8d78e37a5b8da", - "protein_translation": "MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEYKSELSGADIIIASTHIAGEITVTGNKYVVGVRNMLSPADFGPKLLEVIKEHFPQDVK", - "protein_translation_length": 101, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013727" - ], - [ - "gene_synonym", - "NP_418616.1" - ], - [ - "gene_synonym", - "EcoGene:EG12495" - ], - [ - "gene_synonym", - "GI:16132017" - ], - [ - "gene_synonym", - "ulaC" - ], - [ - "gene_synonym", - "ECK4191" - ], - [ - "gene_synonym", - "sgaA" - ], - [ - "gene_synonym", - "b4195" - ], - [ - "gene_synonym", - "JW4153" - ], - [ - "gene_synonym", - "GeneID:948715" - ], - [ - "gene_synonym", - "ptxA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69820" - ], - [ - "gene_synonym", - "yjfU" - ] - ], - "dna_sequence": "ATGAAATTACGTGATTCGCTGGCGGAAAATAAATCCATCCGCCTGCAGGCTGAAGCAGAGACATGGCAGGAAGCGGTGAAAATCGGCGTTGACCTGCTGGTGGCGGCAGATGTGGTAGAGCCGCGTTACTACCAGGCGATTCTGGATGGCGTTGAACAGTTCGGTCCTTATTTCGTTATCGCTCCGGGCCTGGCAATGCCGCACGGGCGTCCGGAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAA", - "dna_sequence_length": 465, - "functions": [ - "L-ascorbate-specific enzyme IIA component of PTS" - ], - "id": "CDS_4114", - "location": [ - [ - "NC_000913", - 4421708, - "+", - 465 - ] - ], - "md5": "4df204dea5b3ca5b1df10abd5eb08709", - "parent_gene": "", - "protein_md5": "6803f30e951285a73a0344012ebec98d", - "protein_translation": "MKLRDSLAENKSIRLQAEAETWQEAVKIGVDLLVAADVVEPRYYQAILDGVEQFGPYFVIAPGLAMPHGRPEEGVKKTGFSLVTLKKPLEFNHDDNDPVDILITMAAVDANTHQEVGIMQIVNLFEDEENFDRLRACRTEQEVLDLIDRTNAAA", - "protein_translation_length": 154, 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"ATGTCATTACCGATGTTGCAAGTCGCGCTGGACAACCAGACTATGGATAGCGCCTACGAAACCACTCGCCTGATTGCCGAAGAAGTCGACATTATCGAAGTGGGCACCATTCTGTGCGTGGGCGAAGGCGTGCGTGCGGTTCGTGACCTGAAAGCGCTCTACCCGCACAAAATCGTACTGGCAGACGCCAAAATTGCCGATGCAGGCAAAATCCTTTCGCGTATGTGCTTCGAAGCCAACGCTGACTGGGTGACGGTAATTTGCTGTGCGGATATCAACACCGCCAAAGGCGCGCTGGACGTGGCAAAAGAGTTTAACGGCGACGTGCAGATCGAACTGACCGGTTACTGGACCTGGGAACAGGCGCAACAGTGGCGCGATGCAGGCATTGGGCAGGTGGTTTATCACCGCAGCCGTGACGCGCAGGCCGCAGGCGTGGCGTGGGGCGAAGCGGACATCACCGCGATCAAACGTCTTTCCGATATGGGCTTCAAAGTCACCGTCACCGGAGGCCTGGCGCTGGAAGATCTGCCGCTGTTCAAGGGTATTCCGATTCACGTCTTTATCGCGGGCCGTAGTATCCGTGATGCCGCTTCTCCGGTGGAAGCCGCACGTCAGTTCAAACGTTCCATCGCTGAACTGTGGGGCTAA", - "dna_sequence_length": 651, - "functions": [ - "3-keto-L-gulonate 6-phosphate decarboxylase" - ], - "id": "CDS_4115", - "location": [ - [ - "NC_000913", - 4422186, - "+", - 651 - ] - ], - "md5": "9862aae167e8e5e78f287e507c9988e1", - "parent_gene": "", - "protein_md5": "fafbd2fd3b195cd952ba25042ba54d8d", - "protein_translation": "MSLPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAELWG", - "protein_translation_length": 216, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "sgaU" - ], - [ - "gene_synonym", - "GI:16132019" - ], - [ - "gene_synonym", - "EcoGene:EG12497" - ], - [ - "gene_synonym", - "ulaE" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39305" - ], - [ - "gene_synonym", - "ASAP:ABE-0013732" - ], - [ - "gene_synonym", - "GeneID:948712" - ], - [ - "gene_synonym", - "JW4155" - ], - [ - "gene_synonym", - "ECK4193" - ], - [ - "gene_synonym", - "b4197" - ], - [ - "gene_synonym", - "NP_418618.1" - ], - [ - "gene_synonym", - "yjfW" - ] - ], - "dna_sequence": "ATGTTGTCCAAACAAATCCCGCTTGGCATCTATGAAAAAGCGCTCCCCGCCGGGGAGTGCTGGCTGGAACGCCTGCAACTGGCAAAAACGTTAGGCTTCGATTTTGTCGAAATGTCGGTAGATGAAACTGACGATCGCCTGTCGCGCCTCAACTGGAGCCGCGAGCAGCGTCTGGCGCTGGTCAATGCGATTGTTGAAACCGGCGTGCGCGTGCCGTCCATGTGCCTTTCTGCTCATCGTCGTTTCCCGCTGGGCAGTGAAGATGACGCGGTGCGGGCGCAGGGGCTGGAGATTATGCGTAAAGCTATCCAGTTCGCCCAGGATGTCGGTATTCGCGTGATCCAGCTGGCGGGCTATGACGTTTACTATCAGGAAGCCAATAACGAAACGCGTCGTCGTTTCCGTGACGGCCTGAAAGAGAGCGTTGAGATGGCAAGCCGCGCGCAGGTGACGCTGGCGATGGAGATCATGGATTATCCGTTGATGAGCTCCATCAGCAAGGCGCTGGGATACGCGCACTATCTCAACAATCCGTGGTTCCAGCTCTACCCGGATATCGGCAACCTGTCGGCGTGGGACAACGATGTGCAGATGGAGTTGCAGGCCGGAATCGGGCATATCGTCGCGGTACATGTGAAAGACACCAAACCTGGCGTCTTCAAAAACGTGCCGTTTGGCGAAGGTGTAGTGGATTTCGAACGTTGTTTCGAAACGCTCAAACAGAGTGGCTATTGCGGGCCGTACCTGATTGAGATGTGGAGCGAAACGGCGGAAGACCCGGCGGCAGAAGTGGCGAAAGCGCGTGATTGGGTGAAAGCGCGCATGGCGAAAGCGGGCATGGTGGAGGCGGCATAA", - "dna_sequence_length": 855, - "functions": [ - "L-xylulose 5-phosphate 3-epimerase" - ], - "id": "CDS_4116", - "location": [ - [ - "NC_000913", - 4422846, - "+", - 855 - ] - ], - "md5": "92ffb970b56802ec1e74ea283b09a183", - "parent_gene": "", - "protein_md5": "e744c4362d57b9423be20d644c32bab0", - "protein_translation": "MLSKQIPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDDRLSRLNWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMSSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVDFERCFETLKQSGYCGPYLIEMWSETAEDPAAEVAKARDWVKARMAKAGMVEAA", - "protein_translation_length": 284, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjfX" - ], - [ - "gene_synonym", - "ulaF" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39306" - ], - [ - "gene_synonym", - "NP_418619.1" - ], - [ - "gene_synonym", - "GeneID:948711" - ], - [ - "gene_synonym", - "sgaE" - ], - [ - "gene_synonym", - "JW4156" - ], - [ - "gene_synonym", - "GI:16132020" - ], - [ - "gene_synonym", - "ECK4194" - ], - [ - "gene_synonym", - "EcoGene:EG12498" - ], - [ - "gene_synonym", - "b4198" - ], - [ - "gene_synonym", - "ASAP:ABE-0013734" - ] - ], - "dna_sequence": "ATGCAAAAGCTAAAACAGCAGGTATTTGAAGCCAACATGGAGCTGCCGCGCTACGGGCTGGTGACCTTTACCTGGGGCAACGTCAGCGCTATCGACCGCGAACGCGGGCTGGTGGTGATCAAGCCCAGCGGCGTTGCCTACGAAACCATGAAAGCGGCCGATATGGTGGTGGTTGATATGAGCGGCAAGGTGGTGGAAGGGGAGTATCGCCCATCTTCCGACACTGCGACGCATCTCGAACTCTACCGTCGTTACCCGTCGCTTGGTGGCATTGTCCATACCCACTCCACTCATGCCACCGCATGGGCGCAGGCGGGGCTGGCGATCCCGGCGTTAGGCACCACGCACGCCGACTACTTCTTTGGCGACATTCCGTGTACGCGCGGGTTAAGCGAAGAAGAGGTGCAGGGCGAGTATGAACTGAACACCGGCAAAGTGATTATCGAAACGCTGGGCAACGCCGAGCCGCTGCATACGCCGGGAATTGTGGTGTATCAGCACGGGCCGTTCGCCTGGGGGAAAGATGCTCACGATGCGGTGCATAACGCGGTGGTGATGGAAGAAGTGGCGAAAATGGCGTGGATTGCCCGCGGCATTAACCCACAACTCAATCACATCGACAGCTTCCTGATGAATAAACACTTCATGCGTAAACACGGTCCTAACGCTTATTACGGGCAGAAGTAG", - "dna_sequence_length": 687, - "functions": [ - "L-ribulose 5-phosphate 4-epimerase" - ], - "id": "CDS_4117", - "location": [ - [ - "NC_000913", - 4423700, - "+", - 687 - ] - ], - "md5": "7c218732ced8b4988951f5ce4ffe9e74", - "parent_gene": "", - "protein_md5": "5a4dee11c475439b2b63be64dfb54944", - "protein_translation": "MQKLKQQVFEANMELPRYGLVTFTWGNVSAIDRERGLVVIKPSGVAYETMKAADMVVVDMSGKVVEGEYRPSSDTATHLELYRRYPSLGGIVHTHSTHATAWAQAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGNAEPLHTPGIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARGINPQLNHIDSFLMNKHFMRKHGPNAYYGQK", - "protein_translation_length": 228, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013736" - ], - [ - "gene_synonym", - "NP_418620.1" - ], - [ - "gene_synonym", - "JW4157" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF86" - ], - [ - "gene_synonym", - "GeneID:948713" - ], - [ - "gene_synonym", - "EcoGene:EG12499" - ], - [ - "gene_synonym", - "yjfY" - ], - [ - "gene_synonym", - "GI:16132021" - ], - [ - "gene_synonym", - "ECK4195" - ], - [ - "gene_synonym", - "b4199" - ] - ], - "dna_sequence": "ATGTTCAGTCGTGTTTTAGCCCTTCTGGCTGTGCTTTTGCTAAGTGCAAATACATGGGCAGCCATTGAAATTAATAACCACCAGGCCAGAAATATGGACGATGTGCAAAGCTTAGGCGTGATTTATATCAATCATAATTTCGCCACTGAAAGCGAAGCACGTCAGGCATTAAATGAAGAAACAGATGCGCAAGGCGCAACGTACTACCACGTAATTCTGATGCGGGAACCGGGGAGTAACGGCAATATGCACGCCAGCGCGGATATTTATCGCTAG", - "dna_sequence_length": 276, - "functions": [ - "YhcN family protein, periplasmic" - ], - "id": "CDS_4118", - "location": [ - [ - "NC_000913", - 4424791, - "-", - 276 - ] - ], - "md5": "e36864de2fba39d067fc0ce3d477a5cb", - "parent_gene": "", - "protein_md5": "d65578b90f9ff9693fd0afcf7c4d1870", - "protein_translation": "MFSRVLALLAVLLLSANTWAAIEINNHQARNMDDVQSLGVIYINHNFATESEARQALNEETDAQGATYYHVILMREPGSNGNMHASADIYR", - "protein_translation_length": 91, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rpsF" - ], - [ - "gene_synonym", - "b4200" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02358" - ], - [ - "gene_synonym", - "EcoGene:EG10905" - ], - [ - "gene_synonym", - "NP_418621.5" - ], - [ - "gene_synonym", - "ECK4196" - ], - [ - "gene_synonym", - "GI:296044035" - ], - [ - "gene_synonym", - "GeneID:948723" - ], - [ - "gene_synonym", - "ASAP:ABE-0013740" - ], - [ - "gene_synonym", - "sdgH" - ], - [ - "gene_synonym", - "JW4158" - ] - ], - "dna_sequence": "ATGCGTCATTACGAAATCGTTTTTATGGTCCATCCTGACCAGAGCGAACAGGTTCCGGGCATGATCGAGCGCTACACTGCTGCCATCACTGGTGCAGAAGGCAAGATCCACCGTCTGGAAGACTGGGGCCGCCGTCAGCTGGCTTACCCGATCAACAAACTGCACAAAGCACACTACGTTCTGATGAATGTTGAAGCTCCGCAGGAAGTGATCGATGAGCTGGAAACTACCTTCCGCTTCAACGATGCCGTTATCCGCAGCATGGTTATGCGTACCAAGCACGCTGTTACCGAAGCATCTCCGATGGTTAAAGCGAAAGACGAGCGCCGTGAGCGTCGCGATGATTTCGCAAACGAAACCGCTGATGATGCTGAAGCTGGGGATTCTGAAGAGTAA", - "dna_sequence_length": 396, - "functions": [ - "30S ribosomal subunit protein S6" - ], - "id": "CDS_4119", - "location": [ - [ - "NC_000913", - 4425118, - "+", - 396 - ] - ], - "md5": "a0e90f736f7eacaf6ff3d453c7041487", - "parent_gene": "", - "protein_md5": "eb3b97ed13530ca6568258f44c46e3b4", - "protein_translation": "MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANETADDAEAGDSEE", - "protein_translation_length": 131, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4201" - ], - [ - "gene_synonym", - "EcoGene:EG10764" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07013" - ], - [ - "gene_synonym", - "priB" - ], - [ - "gene_synonym", - "ECK4197" - ], - [ - "gene_synonym", - "GI:16132023" - ], - [ - "gene_synonym", - "GeneID:948722" - ], - [ - "gene_synonym", - "JW4159" - ], - [ - "gene_synonym", - "NP_418622.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013742" - ] - ], - "dna_sequence": "ATGACCAACCGTCTGGTGTTGTCCGGCACCGTGTGCAGGGCTCCCCTTCGAAAGGTCAGTCCATCAGGAATTCCTCACTGCCAGTTCGTGCTTGAGCATCGTTCTGTGCAGGAGGAAGCCGGCTTTCACCGGCAGGCGTGGTGTCAAATGCCCGTTATTGTTAGCGGACACGAAAACCAGGCCATTACTCACAGTATAACGGTCGGCAGTCGCATAACCGTTCAGGGGTTCATTTCATGCCACAAGGCAAAGAACGGACTGAGCAAAATGGTTTTGCATGCCGAGCAGATTGAATTGATAGATTCTGGAGACTAG", - 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"ATGGCACGTTATTTCCGTCGTCGCAAGTTCTGCCGTTTCACCGCGGAAGGCGTTCAAGAGATCGACTATAAAGATATCGCTACGCTGAAAAACTACATCACCGAAAGCGGTAAGATTGTCCCAAGCCGTATCACCGGTACCCGTGCAAAATACCAGCGTCAGCTGGCTCGCGCTATCAAACGCGCTCGCTACCTGTCCCTGCTGCCGTACACTGATCGCCATCAGTAA", - "dna_sequence_length": 228, - "functions": [ - "30S ribosomal subunit protein S18" - ], - "id": "CDS_4121", - "location": [ - [ - "NC_000913", - 4425839, - "+", - 228 - ] - ], - "md5": "255b00d40d13bd3bdffec7634700bb54", - "parent_gene": "", - "protein_md5": "4d776f2becc435db4210658806b3f9df", - "protein_translation": "MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYTDRHQ", - "protein_translation_length": 75, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418624.1" - ], - [ - "gene_synonym", - "b4203" - ], - [ - "gene_synonym", - "GI:16132025" - ], - [ - "gene_synonym", - "EcoGene:EG10870" - ], - [ - "gene_synonym", - "ASAP:ABE-0013746" - ], - [ - "gene_synonym", - "JW4161" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7R1" - ], - [ - "gene_synonym", - "GeneID:948720" - ], - [ - "gene_synonym", - "rplI" - ], - [ - "gene_synonym", - "ECK4199" - ] - ], - "dna_sequence": "ATGCAAGTTATTCTGCTTGATAAAGTAGCAAACCTGGGTAGCCTGGGTGATCAGGTAAACGTTAAAGCGGGCTATGCTCGTAACTTCCTGGTACCGCAGGGTAAAGCTGTTCCAGCTACCAAGAAAAACATTGAATTCTTCGAAGCTCGTCGCGCTGAACTGGAAGCTAAACTGGCTGAAGTTCTGGCAGCTGCTAATGCTCGCGCTGAGAAAATCAATGCACTGGAAACTGTTACCATCGCGTCTAAAGCTGGCGACGAAGGTAAACTGTTCGGTTCCATCGGTACTCGCGACATCGCTGACGCTGTAACTGCAGCTGGCGTTGAAGTGGCTAAGAGCGAAGTTCGTCTGCCGAACGGCGTTCTGCGTACCACTGGCGAACACGAAGTGAGCTTCCAGGTTCACAGCGAAGTATTCGCGAAAGTGATCGTAAACGTAGTAGCTGAATAA", - "dna_sequence_length": 450, - "functions": [ - "50S ribosomal subunit protein L9" - ], - "id": "CDS_4122", - "location": [ - [ - "NC_000913", - 4426108, - "+", - 450 - ] - ], - "md5": "f0806f8499762f76c8d473b4436f0f6c", - "parent_gene": "", - "protein_md5": "32db77dafcb2b4bb72dcbe9329a202fe", - "protein_translation": "MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE", - "protein_translation_length": 149, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4204" - ], - [ - "gene_synonym", - "ECK4200" - ], - [ - "gene_synonym", - "GI:16132026" - ], - [ - "gene_synonym", - "NP_418625.1" - ], - [ - "gene_synonym", - "yjfZ" - ], - [ - "gene_synonym", - "JW4162" - ], - [ - "gene_synonym", - "GeneID:948719" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39308" - ], - [ - "gene_synonym", - "EcoGene:EG12500" - ], - [ - "gene_synonym", - "ASAP:ABE-0013748" - ] - ], - "dna_sequence": "ATGACATTACCAACGACTATTTATTCATTTCCTGCATATTTATCTCGTTTTTCGTCCACCGACAAACCAGTAAAATTAAAATTTCATCAATACGCACGCGCTACATTACTTTCAAATCGTGGAAGAGATCATAATTGCGATGGCAGACGTACTGTTGAGATCCACAAACTAGATCTCTCAGACTGGCAAGCATTCAATAAGTTAGCGACGAGGTGTAATGCTTACGATGGAATCACAATGAATGGTGATAATTCTTTTGGATGGAACCATGAAGCTACATTAGATAATATTCACGCCCAGAAATACAATAAAGCTTACGCGGGTGCGAGGTTAACCGCAGAACTGAAATATTTATTGCAAGATGTCGAATCCTTCGAACCCAACAGTAAATACACAATACACGAAGTGGTTTTGGGACCTGGTTATGGTACTCCAGACTATACCGGCCAAACGATAGGATACGTTGTAACCCTTCCTGCCCAAATGCCTAATTGCTGGTCATCTGAACTACCAACAATCGATCTTTATATCGACCAACTTCGCACTGTTACAGGCGTTTCTAATGCCCTCGGATTCATCATTGCTGCATTGCTAAACGCGTATTCTGATTTACCCCATGATTTGAAAATTGGTCTGCGTTCCTTATCAAGTTCAGCCGCAATCTACTCGGGTTTGGGTTTCGAGCGAGTGCCGCAGGAGCGAGACATCAGTTGCGCTCGTATGTATCTAACGCCAGCAAACCATCCTGACTTATGGACACAAGAGAATGGTGAATGGATCTACTTGCGAAACTAA", - "dna_sequence_length": 795, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_4123", - "location": [ - [ - "NC_000913", - 4427422, - "-", - 795 - ] - ], - "md5": "efeefeefda6df545393e126119b68d4c", - "parent_gene": "", - "protein_md5": "ce8b68e5a0fc40ff61e65e961a41ee96", - "protein_translation": "MTLPTTIYSFPAYLSRFSSTDKPVKLKFHQYARATLLSNRGRDHNCDGRRTVEIHKLDLSDWQAFNKLATRCNAYDGITMNGDNSFGWNHEATLDNIHAQKYNKAYAGARLTAELKYLLQDVESFEPNSKYTIHEVVLGPGYGTPDYTGQTIGYVVTLPAQMPNCWSSELPTIDLYIDQLRTVTGVSNALGFIIAALLNAYSDLPHDLKIGLRSLSSSAAIYSGLGFERVPQERDISCARMYLTPANHPDLWTQENGEWIYLRN", - "protein_translation_length": 264, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4205" - ], - [ - "gene_synonym", - "ECK4201" - ], - [ - "gene_synonym", - "EcoGene:EG12501" - ], - [ - "gene_synonym", - "ASAP:ABE-0013754" - ], - [ - "gene_synonym", - "JW4163" - ], - [ - "gene_synonym", - "ytfA" - ], - [ - "gene_synonym", - "GeneID:948718" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39309" - ] - ], - "dna_sequence": "CCACAAAAAGCCATTGAGAAAATTATTGATTTTACATGGGATTATTATATTGCTAATCCTTGGTTTTTAAAAATTGTGCATAGTGAAAATCAAAGTAAAGGTGTGCATTATGCAAAATCACAGCGTCTCTTAGAAATTAACCATGCGCACTTGCAGTTAATGGAATCCTTATTGGATGAAGGGAAGAAACACAATATTTTTAAGCCAGATATCGACCCATTGCAGGTGAATATTAATATTGCTGCGCTTGGCGGATATTATTTGATCAACCAGCATACGCTTGGCCTGGTTTATCACATCAGTATGGTTTCACCCCAGGCACTGGAAGCCAGACGTAAGGTCATCAAAGAGACAATCCTTAGCTGGCTTTTGGTTGACCCTTCATCTACCGCGCACGAATAA", - "dna_sequence_length": 402, - "id": "CDS_4124", - "location": [ - [ - "NC_000913", - 4427694, - "+", - 402 - ] - ], - "md5": "ac3434a88559c9eec8b05de6fcb4f714", - "parent_gene": "", - "protein_md5": "4fddf8ee1e420fe2646214fdccdc5736", - "protein_translation": "PQKAIEKIIDFTWDYYIANPWFLKIVHSENQSKGVHYAKSQRLLEINHAHLQLMESLLDEGKKHNIFKPDIDPLQVNINIAALGGYYLINQHTLGLVYHISMVSPQALEARRKVIKETILSWLLVDPSSTAHE", - "protein_translation_length": 133, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4202" - ], - [ - "gene_synonym", - "b4206" - ], - [ - "gene_synonym", - "GI:162135916" - 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"dna_sequence_length": 639, - "functions": [ - "OapA family protein" - ], - "id": "CDS_4125", - "location": [ - [ - "NC_000913", - 4428717, - "-", - 639 - ] - ], - "md5": "062d351ed375a6841b8ce72eb6b4ea83", - "parent_gene": "", - "protein_md5": "2299db4f837deecdc485bb8ca4942f99", - "protein_translation": "MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVVGFLLPSDDTPNAPVVTREAQLDIQSQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQEGQPEEQPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVEGAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR", - "protein_translation_length": 212, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948726" - ], - [ - "gene_synonym", - "ECK4203" - ], - [ - "gene_synonym", - "b4207" - ], - [ - "gene_synonym", - "EcoGene:EG12503" - ], - [ - "gene_synonym", - "NP_418628.4" - ], - [ - "gene_synonym", - "fklB" - ], - [ - "gene_synonym", - "GI:90111705" - ], - [ - "gene_synonym", - "ytfC" - ], - [ - "gene_synonym", - "JW5746" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9L3" - ], - [ - "gene_synonym", - "ASAP:ABE-0013759" - ] - ], - "dna_sequence": "ATGACCACCCCAACTTTTGACACCATCGAAGCGCAAGCAAGCTACGGCATTGGTTTGCAGGTAGGGCAACAACTGAGTGAATCTGGCCTGGAAGGGCTGCTGCCAGAAGCACTGGTTGCAGGTATTGCCGATGCGCTGGAAGGCAAACATCCGGCTGTTCCGGTTGATGTGGTGCATCGCGCGCTGCGTGAAATCCACGAGCGCGCCGATGCCGTTCGTCGTCAGCGTTTCCAGGCGATGGCTGCTGAAGGTGTGAAATACCTGGAAGAAAACGCCAAAAAAGAAGGTGTGAATAGCACCGAATCTGGCCTGCAATTCCGCGTGATCAACCAGGGTGAAGGCGCAATTCCGGCACGTACCGACCGCGTTCGTGTTCATTACACCGGTAAACTGATCGACGGCACCGTGTTTGACAGCTCCGTTGCTCGTGGTGAACCCGCTGAATTCCCGGTTAATGGCGTGATCCCTGGCTGGATTGAAGCACTGACTCTGATGCCGGTAGGTTCTAAATGGGAACTGACTATCCCGCAGGAACTGGCATATGGCGAGCGCGGCGCAGGCGCATCCATCCCTCCGTTCAGCACCCTGGTGTTTGAAGTCGAACTGCTGGAAATCCTCTAA", - "dna_sequence_length": 621, - "functions": [ - "FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase)" - ], - "id": "CDS_4126", - "location": [ - [ - "NC_000913", - 4428935, - "+", - 621 - ] - ], - "md5": "8b973e2c365aebf49b75dfdb465a891f", - "parent_gene": "", - "protein_md5": "70d716e72e21ffc79d5aeaf73bac2f60", - "protein_translation": "MTTPTFDTIEAQASYGIGLQVGQQLSESGLEGLLPEALVAGIADALEGKHPAVPVDVVHRALREIHERADAVRRQRFQAMAAEGVKYLEENAKKEGVNSTESGLQFRVINQGEGAIPARTDRVRVHYTGKLIDGTVFDSSVARGEPAEFPVNGVIPGWIEALTLMPVGSKWELTIPQELAYGERGAGASIPPFSTLVFEVELLEIL", - "protein_translation_length": 206, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4204" - ], - [ - "gene_synonym", - "dagA" - ], - [ - "gene_synonym", - "NP_418629.1" - ], - [ - "gene_synonym", - "b4208" - ], - [ - "gene_synonym", - "EcoGene:EG12504" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AAE0" - ], - [ - "gene_synonym", - "GeneID:948725" - ], - [ - "gene_synonym", - "ytfD" - ], - [ - "gene_synonym", - "JW4166" - ], - [ - "gene_synonym", - "GI:16132030" - ], - [ - "gene_synonym", - "ASAP:ABE-0013764" - ], - [ - "gene_synonym", - "cycA" - ] - ], - "dna_sequence": "ATGGTAGATCAGGTAAAAGTCGTTGCCGATGATCAGGCTCCGGCTGAACAGTCGCTACGGCGCAATCTCACAAACCGACATATTCAGCTTATTGCCATTGGCGGTGCCATTGGTACGGGGTTGTTTATGGGGTCTGGCAAAACGATTAGCCTTGCCGGGCCGTCGATCATTTTCGTTTATATGATCATTGGTTTTATGCTCTTTTTCGTGATGCGGGCAATGGGGGAATTGCTGCTTTCGAATCTGGAATACAAATCTTTTAGTGACTTCGCTTCCGATTTACTCGGGCCGTGGGCAGGATATTTCACCGGCTGGACTTACTGGTTCTGCTGGGTTGTAACCGGTATGGCAGACGTGGTGGCGATCACGGCTTATGCTCAGTTCTGGTTCCCCGATCTCTCCGACTGGGTCGCCTCGCTGGCGGTGATAGTGCTGCTGCTGACGCTCAATCTCGCCACCGTGAAAATGTTCGGTGAGATGGAGTTCTGGTTTGCGATGATCAAAATCGTCGCCATTGTGTCGCTGATTGTCGTCGGCCTGGTCATGGTGGCGATGCACTTTCAGTCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGATTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACTGCCACGCGCGATTAACTCCATTCCGATCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAGCGGCGTCTTCTCTACCAGCCGTATGCTGTTTGGTCTGGCGCAGGAAGGTGTGGCACCGAAAGCGTTCGCTAAACTTTCTAAGCGCGCAGTACCCGCGAAAGGGCTGACGTTCTCGTGTATCTGTCTGCTCGGCGGCGTGGTGATGTTGTATGTGAATCCTAGTGTGATTGGCGCGTTCACGATGATTACAACCGTTTCCGCGATTCTGTTTATGTTCGTCTGGACGATTATCCTTTGCTCGTACCTTGTGTATCGCAAACAGCGTCCTCATCTACATGAGAAGTCGATCTACAAGATGCCGCTCGGCAAGCTGATGTGCTGGGTATGTATGGCGTTCTTTGTGTTCGTGGTCGTGTTGCTGACACTGGAAGATGACACTCGCCAGGCGCTGCTGGTTACCCCGCTGTGGTTTATCGCGCTGGGGTTGGGCTGGCTGTTTATTGGTAAGAAGCGGGCTGCTGAACTGCGGAAATAA", 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[ - "gene_synonym", - "EcoGene:EG12505" - ], - [ - "gene_synonym", - "ytfE" - ], - [ - "gene_synonym", - "GeneID:948724" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P69506" - ], - [ - "gene_synonym", - "dnrN" - ], - [ - "gene_synonym", - "JW4167" - ], - [ - "gene_synonym", - "NP_418630.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013766" - ] - ], - "dna_sequence": "ATGGCTTATCGCGACCAACCTTTAGGTGAACTGGCGCTCTCTATTCCTCGCGCTTCAGCTCTGTTTCGTAAATATGATATGGATTACTGCTGTGGCGGTAAGCAGACGCTGGCGCGCGCGGCGGCACGTAAAGAACTGGATGTTGAGGTCATTGAAGCTGAACTGGCAAAGCTCGCTGAACAACCGATTGAGAAAGACTGGCGTAGCGCCCCGCTGGCAGAAATCATCGACCATATCATCGTGCGCTACCACGATCGTCACCGCGAGCAACTGCCGGAGCTGATTCTGCAAGCGACTAAAGTCGAGCGCGTTCACGCCGACAAACCGAGCGTGCCAAAAGGGCTGACAAAATACCTGACCATGCTGCATGAAGAGCTTTCCAGCCACATGATGAAAGAAGAGCAGATCCTCTTCCCGATGATCAAACAAGGCATGGGCAGCCAGGCAATGGGGCCAATCAGCGTAATGGAAAGCGAGCACGATGAAGCGGGCGAACTGCTGGAAGTGATTAAACACACCACCAATAACGTCACACCGCCGCCAGAAGCCTGCACCACCTGGAAAGCGATGTATAACGGCATTAATGAACTGATTGATGACCTGATGGATCACATCAGTCTGGAAAACAATGTACTGTTCCCACGCGCGCTGGCGGGTGAGTGA", - "dna_sequence_length": 663, - "functions": [ - "iron-sulfur cluster repair protein RIC" - ], - "id": "CDS_4128", - "location": [ - [ - "NC_000913", - 4431983, - "-", - 663 - ] - ], - "md5": "5b10cf9926ab519d12b45b3d194fc999", - "parent_gene": "", - "protein_md5": "e182e2eb845270a8bcbd1103a8acf778", - "protein_translation": "MAYRDQPLGELALSIPRASALFRKYDMDYCCGGKQTLARAAARKELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPSVPKGLTKYLTMLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEHDEAGELLEVIKHTTNNVTPPPEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALAGE", - "protein_translation_length": 220, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4206" - ], - [ - "gene_synonym", - "b4210" - ], - [ - "gene_synonym", - "EcoGene:EG12506" - ], - [ - "gene_synonym", - "GeneID:948732" - ], - [ - "gene_synonym", - "ytfF" - ], - [ - "gene_synonym", - "ASAP:ABE-0013769" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39314" - ], - [ - "gene_synonym", - "JW4168" - ], - [ - "gene_synonym", - "GI:226524763" - ], - [ - "gene_synonym", - "NP_418631.2" - ] - ], - "dna_sequence": "ATGATTAGCGGCGTGCTGTACGCCCTGTTAGCAGGGTTGATGTGGGGGCTTATTTTTGTCGGGCCGTTGATCGTGCCGGAATACCCGGCGATGTTGCAGTCGATGGGGCGTTATCTGGCGTTAGGGTTAATTGCGCTGCCCATTGCCTGGCTGGGACGCGTGCGTCTGCGTCAGTTGGCGCGTCGCGACTGGCTTACCGCCTTGATGCTCACTATGATGGGCAACCTCATCTATTACTTCTGCCTTGCCAGTGCCATTCAACGTACTGGCGCGCCTGTTTCCACGATGATTATCGGCACCCTGCCGGTGGTCATTCCTGTCTTTGCCAATCTGCTTTATAGCCAGCGCGACGGCAAACTCGCGTGGGGAAAACTCGCCCCAGCACTGATTTGTATTGGCATCGGCCTGGCGTGTGTGAATATTGCTGAGTTAAACCACGGACTCCCCGATTTTGACTGGGCACGTTATACCTCTGGCATCGTGCTGGCGTTAGTTTCCGTGGTCTGCTGGGCGTGGTATGCCCTGCGCAACGCCCGCTGGCTGCGGGAAAATCCCGACAAACATCCGATGATGTGGGCAACAGCGCAGGCGCTGGTCACACTGCCGGTTTCACTTATCGGCTATCTCGTCGCTTGTTACTGGCTGAATACGCAAACGCCGGACTTCTCCCTACCCTTTGGCCCCCGTCCGCTGGTGTTTATTAGTCTGATGGTTGCGATAGCCGTGCTTTGCTCATGGGTTGGCGCACTCTGCTGGAACGTCGCCAGCCAGCTATTACCGACAGTGATTCTCGGGCCGCTGATTGTTTTCGAAACGCTGGCAGGTTTGCTGTACACCTTTTTACTCCGCCAGCAAATGCCGCCGCTAATGACGCTGAGCGGTATCGCGCTGTTAGTGATTGGCGTGGTCATCGCGGTCAGAGCAAAACCAGAAAAACCTTTAACTGAATCTGTCTCAGAAAGTTGA", - "dna_sequence_length": 966, - "functions": [ - "DMT transporter family inner membrane protein" - ], - "id": "CDS_4129", - "location": [ - [ - "NC_000913", - 4433056, - "-", - 966 - ] - ], - "md5": "bcd2cf8377f99cfafe21461d0e2a8ec7", - "parent_gene": "", - "protein_md5": "663f63bccd4e40451bef413ad6b74916", - "protein_translation": "MISGVLYALLAGLMWGLIFVGPLIVPEYPAMLQSMGRYLALGLIALPIAWLGRVRLRQLARRDWLTALMLTMMGNLIYYFCLASAIQRTGAPVSTMIIGTLPVVIPVFANLLYSQRDGKLAWGKLAPALICIGIGLACVNIAELNHGLPDFDWARYTSGIVLALVSVVCWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYLVACYWLNTQTPDFSLPFGPRPLVFISLMVAIAVLCSWVGALCWNVASQLLPTVILGPLIVFETLAGLLYTFLLRQQMPPLMTLSGIALLVIGVVIAVRAKPEKPLTESVSES", - "protein_translation_length": 321, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16132033" - ], - [ - "gene_synonym", - "ECK4207" - ], - [ - "gene_synonym", - "b4211" - ], - [ - "gene_synonym", - "qor2" - ], - [ - "gene_synonym", - "EcoGene:EG12507" - ], - [ - "gene_synonym", - "NP_418632.1" - ], - [ - "gene_synonym", - "GeneID:948731" - ], - [ - "gene_synonym", - "ytfG" - ], - [ - "gene_synonym", - "qorB" - ], - [ - "gene_synonym", - "ASAP:ABE-0013773" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39315" - ], - [ - "gene_synonym", - "JW4169" - ] - ], - "dna_sequence": "ATGATCGCTATTACTGGTGCCACTGGCCAACTTGGTCACTATGTTATTGAATCCTTGATGAAAACGGTTCCTGCCAGCCAAATAGTGGCTATCGTTCGTAATCCGGCAAAAGCCCAAGCCCTGGCAGCACAAGGCATTACCGTGCGTCAGGCTGACTACGGCGATGAAGCCGCACTGACATCTGCACTTCAGGGAGTGGAAAAACTACTGCTGATCTCTTCCAGCGAAGTGGGTCAACGTGCCCCGCAGCATCGTAATGTTATTAATGCCGCAAAGGCGGCTGGCGTGAAATTTATCGCTTATACCAGCCTGCTACATGCAGATACCTCCCCGCTCGGCCTCGCCGATGAGCACATCGAGACGGAGAAAATGCTGGCTGATTCTGGCATCGTTTACACCCTGCTGCGCAACGGCTGGTACAGCGAAAACTACCTCGCCAGCGCCCCGGCAGCACTGGAACACGGCGTATTTATCGGTGCGGCGGGCGATGGCAAAATCGCCTCAGCAACGCGGGCAGATTATGCGGCAGCTGCGGCACGCGTGATTAGCGAAGCCGGTCACGAAGGCAAGGTTTACGAACTGGCGGGCGATAGTGCCTGGACGTTGACACAGTTAGCGGCAGAGCTGACCAAACAGAGCGGCAAACAGGTTACCTATCAAAATCTGAGCGAAGCCGATTTCGCCGCGGCACTGAAAAGCGTCGGACTGCCCGACGGACTGGCGGATATGCTGGCGGATTCTGACGTTGGCGCATCGAAAGGCGGTCTGTTTGATGACAGCAAAACACTTAGCAAATTGATTGGCCACCCAACGACAACGTTAGCCGAAAGCGTAAGCCATCTTTTTAATGTTAATAACTAG", - "dna_sequence_length": 861, - "functions": [ - "NAD(P)H:quinone oxidoreductase" - ], - "id": "CDS_4130", - "location": [ - [ - "NC_000913", - 4434024, - "-", - 861 - ] - ], - "md5": "560e7a864648ce094e2a25644de9ea80", - "parent_gene": "", - "protein_md5": "49d6a9721b414222d55df6076d44f5eb", - "protein_translation": "MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTTTLAESVSHLFNVNN", - "protein_translation_length": 286, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4212" - ], - [ - "gene_synonym", - "GeneID:948730" - ], - [ - "gene_synonym", - "EcoGene:EG12508" - ], - [ - "gene_synonym", - "NP_418633.4" - ], - [ - "gene_synonym", - "ECK4208" - ], - [ - "gene_synonym", - "ASAP:ABE-0013777" - ], - [ - "gene_synonym", - "GI:90111706" - ], - [ - "gene_synonym", - "JW5747" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ACN2" - ], - [ - "gene_synonym", - "ytfH" - ] - ], - "dna_sequence": "ATGAGTCAGGTTAGCCTGTCGCAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCGAGGTGTTGAAACACGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGACCTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACAGGCGTTAGAACAGGATGGTTTTCTTAACCGTATCGCGTATCCGGTGGTGCCGCCGCATGTGGAATATAGCCTCACGCCGCTGGGCGAGCAGGTGAGCGAAAAGGTTGCTGCACTGGCGGACTGGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAA", - "dna_sequence_length": 381, - "functions": [ - "DUF24 family HxlR-type putative transcriptional regulator" - ], - "id": "CDS_4131", - "location": [ - [ - "NC_000913", - 4434113, - "+", - 381 - ] - ], - "md5": "0f365310e3ab31f56f30286bc3252c8a", - "parent_gene": "", - "protein_md5": "9d6fb40bfe2d23d847bfe783e5d17e90", - "protein_translation": "MSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREGTHRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEKVAALADWIELNLPEVLAVRDERAA", - "protein_translation_length": 126, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4213" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08331" - ], - [ - "gene_synonym", - "cpdB" - ], - [ - "gene_synonym", - "ECK4209" - ], - [ - "gene_synonym", - "ASAP:ABE-0013782" - ], - [ - "gene_synonym", - "GI:16132035" - ], - [ - "gene_synonym", - "EcoGene:EG10160" - ], - [ - "gene_synonym", - "GeneID:948729" - ], - [ - "gene_synonym", - "JW4171" - ], - [ - "gene_synonym", - "NP_418634.1" - ] - ], - "dna_sequence": "ATGATTAAGTTTAGCGCAACGCTCCTGGCCACGCTGATTGCCGCCAGTGTGAATGCAGCGACGGTCGATCTGCGTATCATGGAAACCACTGATCTGCATAGCAACATGATGGATTTCGATTATTACAAAGACACCGCCACGGAAAAATTCGGACTGGTACGTACGGCAAGCCTGATTAACGATGCCCGCAATGAAGTGAAAAACAGCGTACTGGTTGATAACGGCGATTTGATTCAGGGGAGTCCGCTGGCCGATTACATGTCGGCGAAAGGATTAAAAGCAGGTGATATTCACCCGGTCTATAAGGCATTAAATACGCTGGACTATACCGTCGGAACGCTTGGCAACCACGAGTTTAACTACGGTCTGGATTACCTGAAAAATGCGCTGGCAGGAGCGAAATTCCCTTATGTAAATGCCAACGTCATTGACGCCAGAACCAAACAGCCAATGTTTACACCGTATTTAATTAAAGACACCGAAGTGGTCGATAAAGACGGAAAAAAACAGACGCTGAAGATTGGCTATATTGGCGTCGTGCCACCACAAATCATGGGCTGGGATAAAGCTAATTTATCCGGGAAAGTGACGGTGAATGATATTACCGAAACCGTGCGCAAATACGTGCCTGAAATGCGCGAGAAAGGTGCCGATGTTGTTGTCGTTCTGGCACATTCCGGGCTATCTGCCGATCCGTATAAAGTGATGGCGGAAAACTCAGTTTATTACCTCAGTGAAATTCCGGGCGTTAACGCCATTATGTTTGGCCATGCTCACGCCGTTTTCCCAGGTAAAGATTTTGCTGATATCGAAGGGGCTGATATCGCCAAAGGCACGCTGAATGGTGTTCCGGCGGTAATGCCAGGCATGTGGGGCGATCATCTTGGTGTGGTCGACTTACAACTCAGTAATGACAGCGGTAAATGGCAGGTGACGCAGGCGAAAGCGGAAGCACGACCGATTTACGACATCGCTAATAAAAAATCCCTCGCGGCGGAAGACAGCAAGCTGGTAGAAACACTCAAAGCCGATCACGATGCCACACGCCAGTTCGTCAGCAAGCCAATCGGTAAATCTGCCGACAATATGTATAGCTATCTGGCGCTGGTGCAGGACGATCCGACCGTGCAGGTGGTGAACAACGCGCAAAAAGCGTATGTCGAGCATTACATTCAGGGCGATCCGGATCTGGCAAAACTGCCGGTGCTTTCAGCTGCCGCACCGTTTAAAGTCGGTGGTCGCAAAAATGACCCGGCAAGCTATGTGGAGGTGGAAAAAGGCCAGTTGACCTTCCGTAATGCCGCCGATCTTTATCTCTATCCCAATACGCTGATTGTGGTGAAAGCCAGCGGTAAAGAGGTGAAAGAGTGGCTGGAGTGCTCCGCGGGACAGTTTAACCAGATTGATCCCAACAGCACGAAACCACAGTCACTCATCAACTGGGATGGTTTCCGCACTTATAACTTTGATGTTATTGATGGTGTGAATTATCAGATTGATGTTACCCAGCCCGCCCGTTATGACGGCGAGTGCCAGATGATTAATGCCAATGCGGAAAGGATTAAGAACCTGACCTTTAATGGCAAGCCGATTGATCCGAACGCCATGTTCCTGGTTGCCACCAATAACTATCGCGCTTACGGCGGCAAATTTGCCGGTACGGGCGACAGCCATATCGCTTTTGCTTCACCGGATGAGAACCGCTCGGTGCTGGCAGCGTGGATTGCTGATGAGTCGAAACGTGCGGGGGAAATTCACCCGGCGGCAGATAACAACTGGCGTTTAGCACCGATAGCTGGCGATAAGAAACTGGATATCCGTTTCGAAACCTCTCCGTCAGATAAAGCCGCAGCGTTTATTAAAGAGAAAGGGCAGTATCCGATGAATAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAA", - "dna_sequence_length": 1944, - "functions": [ - "2':3'-cyclic-nucleotide 2'-phosphodiesterase" - ], - "id": "CDS_4132", - "location": [ - [ - "NC_000913", - 4436565, - "-", - 1944 - ] - ], - "md5": "76cee67519e07ae15751f020cb3d2f2f", - "parent_gene": "", - "protein_md5": "6580839c18263456c463a24fc36a60dd", - "protein_translation": "MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKDTATEKFGLVRTASLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDIHPVYKALNTLDYTVGTLGNHEFNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDTEVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGADVVVVLAHSGLSADPYKVMAENSVYYLSEIPGVNAIMFGHAHAVFPGKDFADIEGADIAKGTLNGVPAVMPGMWGDHLGVVDLQLSNDSGKWQVTQAKAEARPIYDIANKKSLAAEDSKLVETLKADHDATRQFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQGDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTFRNAADLYLYPNTLIVVKASGKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYDGECQMINANAERIKNLTFNGKPIDPNAMFLVATNNYRAYGGKFAGTGDSHIAFASPDENRSVLAAWIADESKRAGEIHPAADNNWRLAPIAGDKKLDIRFETSPSDKAAAFIKEKGQYPMNKVATDDIGFAIYQVDLSK", - "protein_translation_length": 647, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4214" - ], - [ - "gene_synonym", - "EcoGene:EG10043" - ], - [ - "gene_synonym", - "GeneID:948728" - ], - [ - "gene_synonym", - "amt" - ], - [ - "gene_synonym", - "GI:16132036" - ], - [ - "gene_synonym", - "NP_418635.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013786" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P22255" - ], - [ - "gene_synonym", - "ECK4210" - ], - [ - "gene_synonym", - "cysQ" - ], - [ - "gene_synonym", - "JW4172" - ], - [ - "gene_synonym", - "amtA" - ] - ], - "dna_sequence": "ATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGACGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTACGCTGACACCGGATGTTCCGGTCCTTTCTGAAGAAGATCCTCCCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGGCTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCATGGCAAACCGATTTTAGGCGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAAGCGTGGAAAGAAGAGTGCGGTGTGCGCAAGCAGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTGATCAGCCGTTCCCATGCGGATGCGGAGCTGAAAGAGTATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGTGGCGGAAGGACAGGCGCAGCTGTACCCGCGCTTCGGACCAACGAATATTTGGGACACCGCCGCTGGACATGCTGTAGCTGCAGCTGCCGGAGCGCACGTTCACGACTGGCAGGGTAAACCGCTGGATTACACTCCGCGTGAGTCGTTCCTGAATCCGGGGTTCAGAGTGTCTATTTACTAA", - "dna_sequence_length": 741, - "functions": [ - "3'(2'),5'-bisphosphate nucleotidase" - ], - "id": "CDS_4133", - "location": [ - [ - "NC_000913", - 4436755, - "+", - 741 - ] - ], - "md5": "e45bacb45429e82f85e5ba16ec57926e", - "parent_gene": "", - "protein_md5": "347fa5f1329d7667423d4c5873cd8b63", - "protein_translation": "MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLTPDVPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPGFRVSIY", - "protein_translation_length": 246, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12509" - ], - [ - "gene_synonym", - "GI:49176474" - ], - [ - "gene_synonym", - "b4215" - ], - [ - "gene_synonym", - "ASAP:ABE-0013790" - ], - [ - "gene_synonym", - "YP_026285.1" - ], - [ - "gene_synonym", - "JW5748" - ], - [ - "gene_synonym", - "ECK4211" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39317" - ], - [ - "gene_synonym", - "ytfI" - ], - [ - "gene_synonym", - "GeneID:948738" - ] - ], - "dna_sequence": "ATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATTGGTGACGTGTCTTTAGGTTATGCCTTATTGGAGGATATAGTAAGCAAATTAAAACGGGGTAAATTTGAACTCCAAATACCAGGAGGTGGAATTAAAGAATGCGATGGATGGTATATTTACGAAAAAATAATTGATGATAATTTTGCCATAGTCATAGAATCTTTGGGCTTTGCGCTTAAAATCTATGGAGGGGATGAACGTTTTCGTAATGGTTCCTCTGTTGTTTTGGAGGATGAAGATTACTCTCTTATTTATAATTTTCTGGTTAATGCAGGTTGCCAACAAGTCGAATTAGCCGAACAAGTGGATGCGATAGTAAGTGCGAATCTGGCCGCAGATAGCGATATTACCAAAGAAAAGATTTGCGAGAAATATAAATCGACCATTGAGGCGTTTAAAAAAGAGCAACTAGCGTTACCAGTATTAGTTCGGCGTAAGAACTCAGAGACTTAA", - "dna_sequence_length": 939, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_4134", - "location": [ - [ - "NC_000913", - 4437707, - "+", - 939 - ] - ], - "md5": "5c786bd88e5ee49a9f54a8af5de78c42", - "parent_gene": "", - "protein_md5": "f6148e0cc56bc9efbb6c5f5ea5cd2a4c", - "protein_translation": "MLPRIRHNNFIGAVELFVKSSYTKTHSNNFFNNIHHAFKKKDWISNYDSLLTLREFFRCATQIDKSGYQVLSSKNETVHAMDKFLISFSLKDNGAEYTMTLRGSGFEYEEIPITINEYNSFMDFKNREFPLEQNRRLYAWDILQKKQSDIPKRIKGYIHQAIGDVSLGYALLEDIVSKLKRGKFELQIPGGGIKECDGWYIYEKIIDDNFAIVIESLGFALKIYGGDERFRNGSSVVLEDEDYSLIYNFLVNAGCQQVELAEQVDAIVSANLAADSDITKEKICEKYKSTIEAFKKEQLALPVLVRRKNSET", - "protein_translation_length": 312, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418637.1" - ], - [ - "gene_synonym", - "b4216" - ], - [ - "gene_synonym", - "ecfJ" - ], - [ - "gene_synonym", - "GI:16132038" - ], - [ - "gene_synonym", - "EcoGene:EG12510" - ], - [ - "gene_synonym", - "GeneID:948737" - ], - [ - "gene_synonym", - "ASAP:ABE-0013792" - ], - [ - "gene_synonym", - "JW4175" - ], - [ - "gene_synonym", - "ECK4212" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39187" - ], - [ - "gene_synonym", - "ytfJ" - ] - ], - "dna_sequence": "ATGACCCTACGCAAGATTCTGGCACTCACCTGCCTGCTGTTGCCGATGATGGCTTCCGCACATCAGTTCGAAACCGGTCAGCGAGTGCCGCCGATTGGCATTACCGATCGGGGCGAGTTGGTGCTTGATAAAGATCAGTTTAGCTACAAAACCTGGAACAGCGCGCAGTTAGTGGGAAAAGTGCGAGTACTGCAACATATTGCTGGTCGCACCTCTGCAAAAGAGAAAAACGCGACGCTGATTGAAGCGATTAAATCAGCGAAGTTACCGCACGATCGTTACCAGACCACCACCATTGTTAACACCGACGACGCGATTCCGGGTTCAGGGATGTTTGTGCGCAGCAGTCTGGAGAGTAATAAAAAGCTTTATCCCTGGTCGCAGTTTATTGTCGATAGCAATGGCGTCGCGCTCGGTGCCTGGCAGCTGGATGAAGAAAGTTCCGCTGTAGTGGTGCTGGATAAGGATGGTCGCGTGCAATGGGCCAAAGACGGGGCGCTCACACCGGAAGAGGTGCAGCAAGTGATGGACCTGCTGCAAAAGTTGCTCAAATAA", - "dna_sequence_length": 555, - "functions": [ - "putative transcriptional regulator" - ], - "id": "CDS_4135", - "location": [ - [ - "NC_000913", - 4439262, - "-", - 555 - ] - ], - "md5": "a637e28ba001284285ef70eda9a6f162", - "parent_gene": "", - "protein_md5": "f8eb7acc179b506e41e4e914ad78684f", - "protein_translation": "MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVALGAWQLDEESSAVVVLDKDGRVQWAKDGALTPEEVQQVMDLLQKLLK", - "protein_translation_length": 184, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418638.2" - ], - [ - "gene_synonym", - "b4217" - ], - [ - "gene_synonym", - "ASAP:ABE-0013797" - ], - [ - "gene_synonym", - "EcoGene:EG12511" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADE2" - ], - [ - "gene_synonym", - "GeneID:948736" - ], - [ - "gene_synonym", - "JW5749" - ], - [ - "gene_synonym", - "GI:90111707" - ], - [ - "gene_synonym", - "ECK4213" - ], - [ - "gene_synonym", - "ytfK" - ] - ], - "dna_sequence": "ATGAAAATTTTCCAACGGTACAACCCACTTCAGGTGGCGAAGTACGTAAAGATCCTGTTCCGTGGACGGTTATACATCAAGGACGTTGGCGCTTTTGAATTCGATAAGGGTAAGATTCTTATCCCAAAAGTGAAGGATAAGCTGCATTTGTCAGTGATGTCCGAAGTTAACCGTCAGGTTATGCGTCTGCAAACAGAGATGGCTTAA", - "dna_sequence_length": 207, - "functions": [ - "DUF1107 family protein" - ], - "id": "CDS_4136", - "location": [ - [ - "NC_000913", - 4439587, - "+", - 207 - ] - ], - "md5": "6a0a73b2a7d78259c4e9b812ab561e3c", - "parent_gene": "", - "protein_md5": "6368f0cdf1a01dc384e1c2397a7d71e6", - "protein_translation": "MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKVKDKLHLSVMSEVNRQVMRLQTEMA", - "protein_translation_length": 68, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418639.1" - ], - [ - "gene_synonym", - "b4218" - ], - [ - "gene_synonym", - "EcoGene:EG12512" - ], - [ - "gene_synonym", - "GI:16132040" - ], - [ - "gene_synonym", - "GeneID:948735" - ], - [ - "gene_synonym", - "ASAP:ABE-0013799" - ], - [ - "gene_synonym", - "JW4177" - ], - [ - "gene_synonym", - "ytfL" - ], - [ - "gene_synonym", - "ECK4214" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE45" - ] - ], - "dna_sequence": "ATGTTAAACAGTATTTTAGTCATACTCTGCTTGATCGCTGTAAGTGCGTTCTTCTCGATGTCCGAGATCTCGCTTGCCGCCTCACGCAAAATCAAACTTAAACTGCTGGCTGATGAAGGCAATATAAATGCCCAACGCGTTCTGAATATGCAGGAAAATCCCGGCATGTTCTTTACCGTGGTCCAAATCGGTCTGAACGCAGTGGCGATTCTCGGCGGTATCGTCGGTGATGCGGCATTTTCTCCAGCTTTTCACAGCCTGTTCTCCCGCTATATGTCGGCAGAGCTCTCTGAGCAACTGAGCTTTATTCTCTCTTTCTCGTTAGTGACTGGCATGTTTATCCTGTTTGCGGATTTAACCCCGAAACGCATCGGTATGATTGCGCCAGAAGCTGTGGCTTTGCGTATCATCAACCCGATGCGCTTCTGCCTGTACGTTTGCACCCCGCTGGTGTGGTTCTTCAACGGCCTGGCGAACATAATCTTCCGTATTTTCAAACTGCCAATGGTACGTAAAGATGACATCACTTCTGATGACATCTACGCGGTAGTGGAAGCCGGTGCGCTGGCGGGCGTGTTACGTAAACAGGAACACGAGCTGATTGAAAACGTCTTTGAGCTGGAATCCCGTACCGTTCCGTCTTCAATGACACCGCGTGAAAACGTGATTTGGTTTGATCTCCACGAAGATGAGCAAAGCCTGAAGAATAAGGTGGCGGAACATCCGCACTCTAAGTTCCTCGTCTGTAATGAAGATATTGACCACATCATCGGTTATGTCGATTCTAAAGACCTGCTGAACCGCGTGCTGGCTAACCAAAGCCTGGCACTGAACAGCGGCGTACAAATTCGCAACACGCTGATTGTGCCGGATACGTTAACCCTTTCAGAGGCGTTGGAAAGTTTTAAAACCGCAGGTGAAGACTTCGCGGTGATCATGAACGAGTACGCGCTGGTGGTGGGGATCATCACCCTCAATGACGTGATGACCACGCTGATGGGCGATCTGGTCGGTCAGGGGCTGGAAGAGCAGATTGTCGCCCGTGATGAGAACTCATGGCTGATTGACGGCGGCACCCCAATTGACGACGTCATGCGCGTGCTGGATATTGACGAGTTCCCGCAGTCGGGCAACTACGAAACCATCGGCGGCTTTATGATGTTTATGCTGCGTAAGATCCCGAAACGCACCGATTCGGTGAAATTCGCCGGCTACAAATTTGAAGTGGTGGATATCGATAACTACCGCATCGACCAGCTGCTGGTGACCCGGATCGACAGCAAGGCCACCGCCCTTTCGCCAAAACTGCCTGACGCTAAAGATAAAGAAGAAAGCGTCGCGTAA", - "dna_sequence_length": 1344, - "functions": [ - "UPF0053 family inner membrane protein" - ], - "id": "CDS_4137", - "location": [ - [ - "NC_000913", - 4441215, - "-", - 1344 - ] - ], - "md5": "bfe5a3e973db4cfb51ac8f92de79d34b", - "parent_gene": "", - "protein_md5": "5e17a86516a0e922489aad67242b433d", - "protein_translation": "MLNSILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINAQRVLNMQENPGMFFTVVQIGLNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSFILSFSLVTGMFILFADLTPKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANIIFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLALNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNYRIDQLLVTRIDSKATALSPKLPDAKDKEESVA", - "protein_translation_length": 447, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A744" - ], - [ - "gene_synonym", - "pms" - ], - [ - "gene_synonym", - "b4219" - ], - [ - "gene_synonym", - "EcoGene:EG11433" - ], - [ - "gene_synonym", - "msrA" - ], - [ - "gene_synonym", - "GeneID:948734" - ], - [ - "gene_synonym", - "GI:16132041" - ], - [ - "gene_synonym", - "NP_418640.1" - ], - [ - "gene_synonym", - "JW4178" - ], - [ - "gene_synonym", - "ASAP:ABE-0013804" - ], - [ - "gene_synonym", - "pmsR" - ], - [ - "gene_synonym", - "ECK4215" - ] - ], - "dna_sequence": "ATGAGTTTATTTGATAAAAAGCATCTGGTTTCCCCCGCCGATGCCCTGCCTGGACGTAACACCCCGATGCCCGTAGCCACGCTGCATGCGGTCAACGGTCACTCAATGACCAATGTACCTGACGGAATGGAGATTGCCATTTTTGCGATGGGTTGTTTCTGGGGTGTGGAGCGTCTGTTCTGGCAGTTACCCGGCGTTTACAGCACCGCCGCAGGCTATACCGGCGGCTATACGCCAAATCCGACTTATCGGGAAGTGTGCTCCGGTGATACGGGTCATGCCGAAGCGGTACGCATTGTTTACGATCCTTCCGTCATCAGCTATGAGCAGTTGCTACAGGTATTTTGGGAGAATCACGATCCCGCCCAGGGAATGCGTCAGGGCAATGACCACGGCACGCAGTATCGTTCAGCGATTTATCCGCTGACCCCAGAACAGGATGCCGCAGCTCGCGCCAGTCTGGAACGTTTTCAGGCGGCGATGCTTGCCGCCGATGACGATCGTCACATCACCACGGAAATCGCTAACGCCACACCGTTTTATTATGCCGAAGATGACCACCAGCAATATCTGCATAAAAACCCGTATGGTTACTGTGGAATTGGCGGAATTGGCGTCTGTCTGCCGCCGGAAGCATAG", - "dna_sequence_length": 639, - "functions": [ - "methionine sulfoxide reductase A" - ], - "id": "CDS_4138", - "location": [ - [ - "NC_000913", - 4442176, - "-", - 639 - ] - ], - "md5": "c422c2d84d4abe1fd58b21155cb1701f", - "parent_gene": "", - "protein_md5": "1c82e6ec7a4b5dfe9ddcca7d3d440604", - "protein_translation": "MSLFDKKHLVSPADALPGRNTPMPVATLHAVNGHSMTNVPDGMEIAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDHQQYLHKNPYGYCGIGGIGVCLPPEA", - "protein_translation_length": 212, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16132042" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADE4" - ], - [ - "gene_synonym", - "tamA" - ], - [ - "gene_synonym", - "b4220" - ], - [ - "gene_synonym", - "yftM" - ], - [ - "gene_synonym", - "NP_418641.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013809" - ], - [ - "gene_synonym", - "JW4179" - ], - [ - "gene_synonym", - "ytfM" - ], - [ - "gene_synonym", - "GeneID:948733" - ], - [ - "gene_synonym", - "EcoGene:EG12513" - ], - [ - "gene_synonym", - "ECK4216" - ] - ], - "dna_sequence": "GTGCGCTATATCCGACAGTTATGCTGTGTAAGCTTACTCTGCTTAAGCGGATCTGCCGTCGCCGCGAACGTCCGTCTACAGGTCGAGGGGTTATCGGGACAGCTGGAAAAGAACGTTCGTGCGCAGCTTTCTACGATTGAAAGTGATGAAGTGACGCCAGACCGTCGCTTTCGCGCACGCGTCGATGATGCCATCCGCGAAGGTCTGAAAGCGCTGGGTTATTACCAGCCGACCATTGAATTTGATCTCCGTCCACCGCCAAAGAAAGGGCGGCAGGTATTGATCGCCAAAGTCACGCCAGGCGTGCCGGTGTTAATTGGCGGCACCGATGTGGTATTGCGCGGCGGCGCGCGGACCGATAAAGACTATTTGAAATTGCTCGATACTCGCCCGGCTATTGGCACGGTACTGAACCAGGGCGATTATGAAAATTTCAAAAAGTCCTTAACCAGCATTGCGTTGCGTAAAGGTTATTTCGATAGCGAATTTACCAAAGCGCAGCTGGGCATTGCGCTCGGCCTGCATAAAGCCTTCTGGGATATTGATTATAACAGTGGCGAACGTTACCGCTTTGGGCATGTGACCTTTGAAGGATCACAAATCCGCGATGAATACCTGCAAAATCTGGTGCCGTTTAAAGAGGGCGATGAGTACGAATCGAAAGATCTGGCAGAACTGAACCGCCGACTTTCTGCTACCGGCTGGTTTAACTCGGTGGTGGTGGCTCCACAATTTGATAAAGCGCGCGAAACGAAAGTATTACCATTGACGGGCGTGGTTTCGCCGCGAACAGAAAACACCATCGAAACCGGGGTCGGTTACTCTACGGACGTGGGACCGCGCGTGAAAGCGACGTGGAAAAAGCCGTGGATGAACTCTTATGGTCACAGTCTGACCACCAGTACTAGTATTTCCGCGCCGGAACAGACCCTCGACTTCAGCTATAAAATGCCGCTGCTGAAGAATCCACTGGAACAATATTATTTGGTGCAGGGCGGTTTTAAGCGCACTGACCTGAACGATACCGAATCTGACTCCACTACGCTGGTGGCTTCTCGCTACTGGGATCTCTCCAGCGGCTGGCAGCGTGCCATTAACCTGCGCTGGAGTCTCGACCACTTTACTCAGGGTGAAATTACCAATACCACGATGCTGTTTTATCCTGGGGTGATGATTAGCCGCACGCGTTCTCGTGGTGGCCTGATGCCAACCTGGGGCGACTCGCAACGCTACTCTATCGACTACTCCAACACGGCCTGGGGTTCAGATGTCGATTTCTCCGTTTTCCAGGCGCAGAACGTCTGGATCCGCACACTGTACGATCGCCATCGTTTTGTTACACGCGGCACGCTGGGCTGGATTGAAACCGGTGATTTCGACAAAGTACCGCCGGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGGGCCAGAATTATGA", 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"type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418642.1" - ], - [ - "gene_synonym", - "GeneID:948742" - ], - [ - "gene_synonym", - "EcoGene:EG12514" - ], - [ - "gene_synonym", - "tamB" - ], - [ - "gene_synonym", - "b4221" - ], - [ - "gene_synonym", - "GI:16132043" - ], - [ - "gene_synonym", - "JW4180" - ], - [ - "gene_synonym", - "ASAP:ABE-0013811" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39321" - ], - [ - "gene_synonym", - "ytfO" - ], - [ - "gene_synonym", - "ytfN" - ], - [ - "gene_synonym", - "ECK4217" - ] - ], - "dna_sequence": "ATGAGTTTATGGAAAAAAATCAGCCTCGGCGTGGTTATCGTTATCTTACTGTTGCTGGGATCGGTGGCGTTTCTGGTGGGCACCACCAGCGGCCTGCATCTGGTATTTAAAGCGGCGGATCGCTGGGTGCCAGGACTGGATATTGGCAAGGTCACCGGCGGCTGGCGCGATCTCACCTTGTCTGACGTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGGACTTCACCTCCGGCCTGAACTGGCAGGAGAAAACCCTGACCCTGAAACCGACGTCGCTGAAAGGCCTGCTGATTGCTCTGCCGAAAGTGGCGGAAGTGGCGCAGGAAGAAGTGGTCGAACCGAAAATTGAAAATCCGCAGCCGGATGAAAAGCCGCTCGGCGAAACGCTGAAAGATCTCTTTTCTCGCCCGGTATTGCCGGAAATGACCGACGTGCATTTGCCGCTTAACCTGAACATTGAAGAGTTTAAGGGCGAGCAGCTGCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCAGGTCAATCTCGACAAACTCACCGTCGCGGCGCTGGAAGGGAAAACTGAACTCAAGGCGTTGCTCGACTGGCAACAGGCCATTAGTTGGCGCGGTGAGCTAACGCTTAACGGCATTAACACCGCCAAAGAGTTCCCGGACTGGCCGTCGAAACTCAATGGCTTGATTAAAACCCGCGGTAGCCTGTACGGCGGCACCTGGCAGATGGACGTGCCGGAGTTGAAGCTGACCGGTAACGTTAAACAGAACAAAGTGAACGTTGACGGCACGCTGAAAGGCAACAGTTATATGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATCAAATCCACCGATCAGATCGCCGGGAAACTCGACGTACGCGTTGAGCAAATTTCGCAGCCGGATGTAAATATCAACCTCGTCACCCTGAATGCCAAAGGCAGCGAAAAGCAGCACGAGCTACAGTTGCGGATTCAGGGGGAGCCTGTCTCCGGGCAGCTTAATCTGGCAGGAAGTTTTGATCGCAAAGAAGAACGCTGGAAGGGAACTCTTAGCAATACCCGCTTCCAGACGCCGGTTGGCCCGTGGTCGCTGACCCGCGATATTGCGCTGGATTACCGCAATAAGGAGCAAAAAATCAGCATCGGGCCACACTGCTGGCTTAACCCGAATGCGGAACTGTGCGTGCCGCAAACTATCGATGCGGGGGCCGAAGGGCGTGCGGTGGTGAATCTCAACCGCTTCGACCTCGCCATGCTGAAACCGTTTATGCCAGAAACCACTCAGGCCAGCGGTATCTTCACGGGTAAAGCGGACGTTGCCTGGGACACCACGAAAGAGGGGCTGCCGCAGGGCAGTATCACCCTTTCGGGGCGTAACGTGCAGGTAACGCAAACCGTCAACGATGCGGCGCTGCCCGTGGCGTTTCAGACACTGAATCTGACGGCGGAATTGCGTAACAACCGTGCCGAATTGGGCTGGACCATCCGCCTGACCAATAACGGCCAGTTTGATGGACAGGTGCAGGTGACCGATCCGCAAGGCCGCCGTAATCTTGGTGGCAACGTCAATATCCGTAACTTCAACCTTGCGATGATAAACCCCATCTTTACCCGTGGGGAAAAAGCAGCGGGGATGGTGAGTGCCAACTTGCGTCTGGGTGGTGATGTGCAAAGCCCGCAGTTGTTTGGTCAGCTTCAGGTTACGGGTGTGGATATCGATGGCAACTTTATGCCGTTTGATATGCAACCGAGCCAGCTTGCGGTCAACTTTAACGGTATGCGCTCGACGCTTGCCGGTACAGTACGGACCCAGCAGGGTGAAATCTACCTGAACGGTGATGCCGACTGGAGCCAAATTGAAAACTGGCGGGCGCGGGTAACGGCGAAAGGCAGTAAAGTGCGGATCACCGTGCCGCCGATGGTACGAATGGATGTATCGCCAGATGTTGTATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTTGGCAACAATGTGCGCATTGACGCCTTTGGCCTGAAAGCGCGGCTGACGGGCGATCTCAATGTCGTTCAGGACAAACAAGGGCTGGGTCTGAACGGGCAGATCAACATCCCTGAAGGGCGCTTCCATGCCTATGGTCAGGATCTGATTGTGCGTAAAGGTGAGTTACTGTTCTCTGGTCCGCCAGATCAACCGTATCTTAATATTGAAGCTATTCGTAACCCGGATGCTACAGAAGACGACGTAATCGCCGGAGTTCGCGTCACTGGTCTGGCGGACGAACCGAAAGCGGAGATCTTCTCTGACCCGGCGATGTCGCAACAAGCTGCCTTGTCTTATTTGCTACGTGGACAAGGGCTGGAGAGCGATCAGAGCGACAGTGCGGCAATGACCTCGATGCTGATTGGTTTGGGGGTTGCGCAAAGTGGCCAGATTGTGGGTAAAATCGGCGAGACGTTTGGCGTAAGCAATTTAGCGCTCGACACCCAGGGAGTAGGCGACTCCTCCCAGGTAGTGGTCAGCGGCTATGTATTGCCAGGTCTGCAAGTGAAATACGGCGTGGGTATATTTGACTCTATAGCAACACTCACGTTACGTTATCGCCTGATGCCTAAGCTATATCTGGAAGCCGTGTCTGGTGTAGACCAGGCACTGGATTTGCTCTATCAGTTCGAGTTTTAG", 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"MSLWKKISLGVVIVILLLLGSVAFLVGTTSGLHLVFKAADRWVPGLDIGKVTGGWRDLTLSDVRYEQPGVAVKAGNLHLAVGLECLWNSSVCINDLALKDIQVNIDSKKMPPSEQVEEEEDSGPLDLSTPYPITLTRVALDNVNIKIDDTTVSVMDFTSGLNWQEKTLTLKPTSLKGLLIALPKVAEVAQEEVVEPKIENPQPDEKPLGETLKDLFSRPVLPEMTDVHLPLNLNIEEFKGEQLRVTGDTDITVSTMLLKVSSIDGNTKLDALDIDSSQGIVNASGTAQLSDNWPVDITLNSTLNVEPLKGEKVKLKMGGALREQLEIGVNLSGPVDMDLRAQTRLAEAGLPLNVEVNSKQLYWPFTGEKQYQADDLKLKLTGKMTDYTLSMRTAVKGQEIPPATITLDAKGNEQQVNLDKLTVAALEGKTELKALLDWQQAISWRGELTLNGINTAKEFPDWPSKLNGLIKTRGSLYGGTWQMDVPELKLTGNVKQNKVNVDGTLKGNSYMQWMIPGLHLELGPNSAEVKGELGVKDLNLDATINAPGLDNALPGLGGTAKGLVKVRGTVEAPQLLADITARGLRWQELSVAQVRVEGDIKSTDQIAGKLDVRVEQISQPDVNINLVTLNAKGSEKQHELQLRIQGEPVSGQLNLAGSFDRKEERWKGTLSNTRFQTPVGPWSLTRDIALDYRNKEQKISIGPHCWLNPNAELCVPQTIDAGAEGRAVVNLNRFDLAMLKPFMPETTQASGIFTGKADVAWDTTKEGLPQGSITLSGRNVQVTQTVNDAALPVAFQTLNLTAELRNNRAELGWTIRLTNNGQFDGQVQVTDPQGRRNLGGNVNIRNFNLAMINPIFTRGEKAAGMVSANLRLGGDVQSPQLFGQLQVTGVDIDGNFMPFDMQPSQLAVNFNGMRSTLAGTVRTQQGEIYLNGDADWSQIENWRARVTAKGSKVRITVPPMVRMDVSPDVVFEATPNLFTLDGRVDVPWARIVVHDLPESAVGVSSDVVMLNDNLQPEEPKTASIPINSNLIVHVGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAYGQDLIVRKGELLFSGPPDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEPKAEIFSDPAMSQQAALSYLLRGQGLESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGVSNLALDTQGVGDSSQVVVSGYVLPGLQVKYGVGIFDSIATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF", - "protein_translation_length": 1259, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418643.1" - ], - [ - "gene_synonym", - "ytfP" - ], - [ - "gene_synonym", - "GeneID:948741" - ], - [ - "gene_synonym", - "EcoGene:EG12516" - ], - [ - "gene_synonym", - "b4222" - ], - [ - "gene_synonym", - "ECK4218" - ], - [ - "gene_synonym", - "JW4181" - ], - [ - "gene_synonym", - "GI:16132044" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE48" - ], - [ - "gene_synonym", - "ASAP:ABE-0013814" - ] - ], - "dna_sequence": "ATGCGAATATTTGTCTACGGCAGTTTACGCCACAAACAAGGCAACAGTCACTGGATGACCAATGCCCAGTTACTGGGCGATTTCAGTATCGATAACTACCAGTTGTATAGCCTGGGCCACTATCCAGGCGCAGTTCCGGGGAACGGAACGGTACACGGTGAAGTTTATCGTATTGACAACGCCACGCTGGCCGAACTTGATGCCTTGCGCACCAGGGGCGGTGAATACGCGCGCCAGTTGATTCAGACGCCGTACGGGAGTGCATGGATGTACGTTTATCAACGACCCGTCGATGGATTAAAGCTAATTGAAAGCGGCGACTGGTTAGACAGGGATAAGTAA", - "dna_sequence_length": 342, - "functions": [ - "GGCT-like protein" - ], - "id": "CDS_4141", - "location": [ - [ - "NC_000913", - 4447894, - "+", - 342 - ] - ], - "md5": "8ddabaf532d3985eecf823707bc95d17", - "parent_gene": "", - "protein_md5": "ef23aa39d7fa5e452a998421f0e9cd7d", - "protein_translation": "MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLGHYPGAVPGNGTVHGEVYRIDNATLAELDALRTRGGEYARQLIQTPYGSAWMYVYQRPVDGLKLIESGDWLDRDK", - "protein_translation_length": 113, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013820" - ], - [ - "gene_synonym", - "yjfB" - ], - [ - "gene_synonym", - "b4224" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08365" - ], - [ - "gene_synonym", - "chpS" - ], - [ - "gene_synonym", - "JW5750" - ], - [ - "gene_synonym", - "EcoGene:EG11250" - ], - [ - "gene_synonym", - "NP_418645.2" - ], - [ - "gene_synonym", - "GI:90111708" - ], - [ - "gene_synonym", - "ECK4220" - ], - [ - "gene_synonym", - "chpBI" - ], - [ - "gene_synonym", - "GeneID:948739" - ] - ], - "dna_sequence": "ATGCGTATTACCATAAAAAGATGGGGGAACAGTGCAGGTATGGTCATTCCCAATATCGTAATGAAAGAACTTAACTTACAGCCGGGGCAGAGCGTGGAGGCGCAAGTGAGCAACAATCAACTGATTCTGACACCCATCTCCAGGCGCTACTCGCTTGATGAACTGCTGGCACAGTGTGACATGAACGCCGCGGAACTTAGCGAGCAGGATGTCTGGGGTAAATCCACCCCTGCGGGTGACGAAATATGGTAA", - "dna_sequence_length": 252, - "functions": [ - "antitoxin of the ChpBS toxin-antitoxin system" - ], - "id": "CDS_4142", - "location": [ - [ - "NC_000913", - 4448447, - "+", - 252 - ] - ], - "md5": "41d550bdfdd167fa5533187ff6436096", - "parent_gene": "", - "protein_md5": "51dcac77b3730d98af907e16a9b8d2bf", - "protein_translation": "MRITIKRWGNSAGMVIPNIVMKELNLQPGQSVEAQVSNNQLILTPISRRYSLDELLAQCDMNAAELSEQDVWGKSTPAGDEIW", - "protein_translation_length": 83, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0013822" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P33647" - ], - [ - "gene_synonym", - "EcoGene:EG12096" - ], - [ - "gene_synonym", - "b4225" - ], - [ - "gene_synonym", - "yjfE" - ], - [ - "gene_synonym", - "GeneID:948747" - ], - [ - "gene_synonym", - "GI:16132047" - ], - [ - "gene_synonym", - "JW4184" - ], - [ - "gene_synonym", - "NP_418646.1" - ], - [ - "gene_synonym", - "chpB" - ], - [ - "gene_synonym", - "ECK4221" - ], - [ - "gene_synonym", - "chpBK" - ] - ], - "dna_sequence": "ATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGGTGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGGGCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCGTGGTGCTGGTGAATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGCGTTATTACGCTTGCAGGCGGTGGTGGAATAA", - "dna_sequence_length": 351, - "functions": [ - "toxin of the ChpB-ChpS toxin-antitoxin system" - ], - "id": "CDS_4143", - "location": [ - [ - "NC_000913", - 4448692, - "+", - 351 - ] - ], - "md5": "f69ca1d5c5a805052f1b501066247a0f", - "parent_gene": "", - "protein_md5": "5b0045c277da925555f72981611dd9f7", - "protein_translation": "MVKKSEFERGDIVLVGFDPASGHEQQGAGRPALVLSVQAFNQLGMTLVAPITQGGNFARYAGFSVPLHCEEGDVHGVVLVNQVRMMDLHARLAKRIGLAADEVVEEALLRLQAVVE", - "protein_translation_length": 116, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ppa" - ], - [ - "gene_synonym", - "NP_418647.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013824" - ], - [ - "gene_synonym", - "b4226" - ], - [ - "gene_synonym", - "EcoGene:EG10755" - ], - [ - "gene_synonym", - "GeneID:948748" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7A9" - ], - [ - "gene_synonym", - "JW4185" - ], - [ - "gene_synonym", - "GI:16132048" - ], - [ - "gene_synonym", - "ECK4222" - ] - ], - "dna_sequence": "ATGAGCTTACTCAACGTCCCTGCGGGTAAAGATCTGCCGGAAGACATCTACGTTGTTATTGAGATCCCGGCTAACGCAGATCCGATCAAATACGAAATCGACAAAGAGAGCGGCGCACTGTTCGTTGACCGCTTCATGTCCACCGCGATGTTCTATCCATGCAACTACGGTTACATCAACCACACCCTGTCTCTGGACGGTGACCCGGTTGACGTACTGGTCCCAACTCCGTACCCGCTGCAGCCGGGTTCTGTGATCCGTTGCCGTCCGGTTGGCGTTCTGAAAATGACCGACGAAGCCGGTGAAGATGCGAAACTGGTTGCGGTTCCGCACAGCAAGCTGAGCAAAGAATACGATCACATTAAAGACGTTAACGATCTGCCTGAACTGCTGAAAGCGCAAATCGCTCACTTCTTCGAGCACTACAAAGACCTCGAAAAAGGCAAGTGGGTGAAAGTTGAAGGTTGGGAAAACGCAGAAGCCGCTAAAGCTGAAATCGTTGCCTCCTTCGAGCGCGCAAAGAATAAATAA", - "dna_sequence_length": 531, - "functions": [ - "inorganic pyrophosphatase" - ], - "id": "CDS_4144", - "location": [ - [ - "NC_000913", - 4449652, - "-", - 531 - ] - ], - "md5": "f9816d41af005a9853f61795c922f729", - "parent_gene": "", - "protein_md5": "108cc7936765946bc5b79ea261151b2d", - "protein_translation": "MSLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAEAAKAEIVASFERAKNK", - "protein_translation_length": 176, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948746" - ], - [ - "gene_synonym", - "EcoGene:EG12517" - ], - [ - "gene_synonym", - "ytfQ" - ], - [ - "gene_synonym", - "b4227" - ], - [ - "gene_synonym", - "ASAP:ABE-0013829" - ], - [ - "gene_synonym", - "NP_418648.1" - ], - [ - "gene_synonym", - "JW4186" - ], - [ - "gene_synonym", - "GI:16132049" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39325" - ], - [ - "gene_synonym", - "ECK4223" - ] - ], - "dna_sequence": "ATGTGGAAACGCTTACTTATAGTCTCTGCAGTCTCGGCAGCCATGTCGTCTATGGCGTTGGCCGCTCCATTAACCGTTGGATTTTCGCAGGTCGGATCGGAATCAGGCTGGCGTGCCGCAGAAACCAATGTGGCGAAAAGTGAAGCCGAAAAGCGCGGAATCACGTTGAAAATTGCCGATGGTCAGCAAAAGCAGGAAAACCAGATTAAAGCGGTACGTTCCTTCGTTGCACAAGGGGTGGATGCGATCTTTATCGCTCCGGTGGTCGCGACAGGTTGGGAACCGGTATTAAAAGAGGCGAAAGATGCCGAAATCCCGGTATTCTTGCTCGATCGTTCCATTGATGTGAAAGACAAATCTCTCTATATGACCACCGTCACTGCCGACAACATCCTCGAAGGCAAGTTGATTGGTGACTGGCTGGTAAAAGAAGTGAATGGCAAACCATGCAACGTGGTGGAGCTGCAGGGCACCGTTGGGGCCAGCGTCGCCATTGACCGTAAGAAAGGCTTTGCCGAAGCCATTAAGAATGCGCCAAATATCAAAATCATCCGCTCGCAGTCAGGTGACTTCACCCGCAGTAAAGGCAAAGAAGTCATGGAGAGCTTTATCAAAGCGGAAAACAACGGCAAAAACATCTGCATGGTTTACGCCCATAACGACGACATGGTGATTGGTGCAATTCAGGCAATTAAAGAAGCGGGCCTGAAACCGGGCAAAGATATCCTCACGGGTTCCATTGACGGTGTACCGGACATCTACAAAGCGATGATGGATGGCGAAGCGAACGCCAGTGTTGAACTGACGCCGAATATGGCAGGTCCCGCCTTCGACGCGCTGGAGAAATACAAAAAAGACGGCACCATGCCTGAAAAGCTGACGTTAACCAAATCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGA", - "dna_sequence_length": 957, - "functions": [ - "galactofuranose ABC transporter periplasmic binding protein" - ], - "id": "CDS_4145", - "location": [ - [ - "NC_000913", - 4449962, - "+", - 957 - ] - ], - "md5": "9fbc7fd5292ea8fd9b07d184c3688ba2", - "parent_gene": "", - "protein_md5": "9e2aad1c75e88a3db508aa845635d7b7", - "protein_translation": "MWKRLLIVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGKDILTGSIDGVPDIYKAMMDGEANASVELTPNMAGPAFDALEKYKKDGTMPEKLTLTKSTLYLPDTAKEELEKKKNMGY", - "protein_translation_length": 318, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12518" - ], - [ - "gene_synonym", - "GI:49176475" - ], - [ - "gene_synonym", - "ytfS" - ], - [ - "gene_synonym", - "ytfR" - ], - [ - "gene_synonym", - "b4485" - ], - [ - "gene_synonym", - "GeneID:2847725" - ], - [ - "gene_synonym", - "JW5752" - ], - [ - "gene_synonym", - "ECK4224" - ], - [ - "gene_synonym", - "YP_026286.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q6BEX0" - ], - [ - "gene_synonym", - "ASAP:ABE-0174118" - ] - ], - "dna_sequence": "ATGACGACCGACCAACACCAGGAGATCCTCCGCACCGAAGGATTAAGTAAATTTTTCCCCGGCGTCAAAGCGTTAGACAACGTTGATTTCAGCCTGCGCCGTGGCGAAATCATGGCGCTGCTCGGTGAAAACGGGGCGGGAAAATCAACGCTAATCAAAGCATTAACTGGTGTATACCACGCCGATCGCGGCACCATCTGGCTGGAAGGCCAGGCTATCTCACCGAAAAATACCGCCCACGCGCAACAACTCGGCATTGGCACCGTCTATCAGGAAGTCAACCTGCTACCCAATATGTCGGTCGCTGATAATCTATTTATAGGCCGCGAACCCAAACGCTTCGGCCTTCTACGCCGCAAAGAGATGGAAAAGCGCGCCACCGAACTGATGGCATCTTACGGTTTCTCCCTCGACGTGCGCGAACCGCTCAACCGCTTTTCAGTCGCGATGCAGCAAATCGTCGCTATTTGTCGGGCTATCGATCTCTCTGCCAAAGTGCTGATCCTCGATGAACCCACCGCCAGTCTCGACACCCAGGAAGTGGAGTTACTGTTTGACCTGATGCGTCAGTTGCGCGATCGCGGCGTCAGCCTGATTTTTGTCACTCACTTTCTCGATCAGGTCTATCAGGTCAGCGATCGGATCACCGTCTTACGCAACGGCAGTTTCGTAGGCTGTCGGGAAACGTGCGAGCTACCGCAGATCGAACTGGTAAAAATGATGCTGGGGCGCGAGCTGGATACCCACGCGCTACAGCGTGCCGGGCGAACATTGTTGAGCGACAAACCCGTTGCCGCGTTCAAAAATTACGGCAAAAAAGGAACGATCGCACCGTTTGATCTCGAAGTACGCCCCGGCGAGATCGTCGGTCTGGCTGGATTGCTGGGATCAGGACGTACCGAAACCGCCGAAGTGATCTTCGGTATCAAACCTGCTGACAGCGGCACGGCGTTGATCAAAGGCAAACCGCAAAACCTGCGATCGCCACATCAGGCTTCGGTACTGGGCATTGGCTTCTGCCCGGAAGACAGGAAAACCGATGGCATCATCGCTGCCGCCTCGGTGCGGGAAAATATCATCCTCGCTCTCCAGGCCCAGCGCGGCTGGCTACGTCCCATTTCCCGCAAAGAACAGCAAGAGATTGCCGAACGCTTTATCCGCCAGCTTGGCATTCGCACACCTTCAACTGAACAACCGATTGAATTTCTCTCCGGCGGCAATCAGCAAAAAGTGTTGCTTTCACGTTGGCTACTGACCCGACCGCAATTTCTGATCCTCGATGAGCCAACCCGCGGCATTGATGTTGGTGCCCACGCCGAGATCATCCGCCTGATTGAAACGCTATGCGCCGATGGTCTGGCGCTGCTGGTGATCTCCTCCGAACTGGAAGAGCTGGTGGGCTATGCCGATCGGGTGATTATCATGCGCGATCGCAAACAGGTGGCGGAGATCCCGCTGGCAGAGCTTTCCGTTCCGGCGATCATGAACGCCATTGCGGCGTAA", - "dna_sequence_length": 1503, - "functions": [ - "putative sugar ABC transporter ATPase" - ], - "id": "CDS_4146", - "location": [ - [ - "NC_000913", - 4451058, - "+", - 1503 - ] - ], - "md5": "52c60611a055d5155dac106535e163c1", - "parent_gene": "", - "protein_md5": "9df0d4edd067a9b949850e1d5794f056", - "protein_translation": "MTTDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTGVYHADRGTIWLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLFIGREPKRFGLLRRKEMEKRATELMASYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQEVELLFDLMRQLRDRGVSLIFVTHFLDQVYQVSDRITVLRNGSFVGCRETCELPQIELVKMMLGRELDTHALQRAGRTLLSDKPVAAFKNYGKKGTIAPFDLEVRPGEIVGLAGLLGSGRTETAEVIFGIKPADSGTALIKGKPQNLRSPHQASVLGIGFCPEDRKTDGIIAAASVRENIILALQAQRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQPIEFLSGGNQQKVLLSRWLLTRPQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALLVISSELEELVGYADRVIIMRDRKQVAEIPLAELSVPAIMNAIAA", - "protein_translation_length": 500, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ytfT" - ], - [ - "gene_synonym", - "NP_418651.3" - ], - [ - "gene_synonym", - "GeneID:948743" - ], - [ - "gene_synonym", - "b4230" - ], - [ - "gene_synonym", - "EcoGene:EG12520" - ], - [ - "gene_synonym", - "ASAP:ABE-0013838" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39328" - ], - [ - "gene_synonym", - "JW5753" - ], - [ - "gene_synonym", - "ECK4225" - ], - [ - "gene_synonym", - "GI:145698343" - ] - ], - "dna_sequence": "GTGATGCCTCAATCTCTTCCGGACACCACTACGCCAAAAAGGCGCTTTCGCTGGCCGACGGGGATGCCGCAGCTGGTAGCACTATTGCTGGTGCTGCTGGTCGATAGCCTGGTAGCCCCGCATTTCTGGCAGGTGGTGCTTCAGGATGGGCGTTTGTTCGGTAGCCCCATAGACATTCTTAACCGTGCAGCTCCCGTTGCGTTACTGGCGATTGGCATGACGCTGGTGATCGCCACCGGTGGGATTGATCTCTCCGTAGGGGCGGTGATGGCTATCGCCGGAGCCACAACGGCTGCGATGACGGTCGCGGGATTCAGCCTGCCGATTGTTTTGTTAAGCGCCCTGGGCACCGGCATCCTGGCGGGATTGTGGAACGGCATACTGGTAGCGATCCTCAAAATTCAGCCGTTTGTCGCCACTCTGATCCTGATGGTCGCCGGGCGCGGCGTGGCGCAACTGATCACCGCCGGGCAGATCGTCACGTTTAACTCGCCGGATCTCTCATGGTTCGGCAGTGGATCGCTGTTGTTCCTGCCAACGCCGGTCATTATCGCGGTGCTGACGCTTATCCTGTTCTGGCTGTTGACCCGCAAAACGGCGCTGGGGATGTTTATCGAAGCCGTTGGTATCAACATTCGGGCGGCAAAAAATGCCGGGGTAAACACGCGAATCATCGTCATGCTCACTTATGTGTTGAGCGGGCTGTGTGCGGCGATTGCGGGCATTATCGTGGCGGCGGATATTCGCGGTGCCGATGCCAACAACGCTGGGTTATGGCTGGAGCTGGACGCCATTCTCGCGGTGGTGATTGGCGGCGGATCGCTGATGGGCGGGCGCTTTAACCTGCTACTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGATGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAAGCGGTGGTGGTGCTTTGCGTGCTGATTGTTCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAA", - "dna_sequence_length": 1026, - "functions": [ - "putative sugar ABC transporter permease" - ], - "id": "CDS_4147", - "location": [ - [ - "NC_000913", - 4452571, - "+", - 1026 - ] - ], - "md5": "970062937705fbcd2ab6d38f6cc0bae5", - "parent_gene": "", - "protein_md5": "6cf13b3749df8bbc4331bb8f0975e276", - "protein_translation": "MMPQSLPDTTTPKRRFRWPTGMPQLVALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITAGQIVTFNSPDLSWFGSGSLLFLPTPVIIAVLTLILFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIAGIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGVRSRDKT", - "protein_translation_length": 341, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948754" - ], - [ - "gene_synonym", - "EcoGene:EG12439" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37772" - ], - [ - "gene_synonym", - "b4231" - ], - [ - "gene_synonym", - "yjfF" - ], - [ - "gene_synonym", - "ASAP:ABE-0013840" - ], - [ - "gene_synonym", - "GI:90111710" - ], - [ - "gene_synonym", - "JW5754" - ], - [ - "gene_synonym", - "ECK4226" - ], - [ - "gene_synonym", - "NP_418652.2" - ] - ], - "dna_sequence": "GTGATAAAACGTAATTTGCCACTGATGATCACCATCGGCGTCTTTGTGTTGGGTTATCTTTACTGCCTGACCCAGTTTCCCGGTTTTGCTTCCACAAGAGTGATCTGCAATATCCTGACCGATAATGCCTTTCTTGGGATCATTGCCGTTGGCATGACCTTTGTGATCCTCTCAGGTGGGATCGATCTCTCCGTCGGTTCGGTGATCGCCTTTACTGGCGTGTTTCTGGCAAAAGTGATTGGCGATTTCGGCCTCTCGCCGCTGCTGGCGTTTCCGCTAGTGCTGGTGATGGGCTGTGCCTTCGGCGCATTTATGGGGCTTCTGATCGACGCCCTGAAGATCCCGGCATTTATCATTACGCTTGCGGGGATGTTCTTTTTGCGCGGCGTCAGCTATCTCGTTTCGGAAGAGTCGATTCCGATAAACCATCCCATTTATGACACGCTCTCAAGCCTTGCGTGGAAAATCCCTGGCGGCGGTCGCTTAAGTGCGATGGGACTGCTGATGTTGGCGGTGGTGGTTATCGGCATATTCCTCGCGCATCGTACCCGTTTTGGTAATCAGGTATACGCCATTGGCGGCAACGCAACGTCGGCGAATCTGATGGGGATTTCCACTCGCAGCACCACTATTCGCATTTATATGCTCTCCACCGGACTGGCAACGCTGGCGGGGATTGTCTTCTCGATTTATACCCAGGCCGGATATGCGCTGGCGGGCGTAGGTGTGGAACTGGATGCTATCGCCTCAGTGGTAATTGGCGGTACGCTTTTGAGCGGTGGCGTTGGAACGGTATTAGGGACGCTTTTTGGCGTGGCGATTCAGGGACTGATTCAGACTTACATAAACTTTGATGGCACGCTGAGTTCCTGGTGGACGAAAATCGCCATCGGTATTTTGTTGTTTATTTTTATAGCATTACAGCGTGGATTAACGGTGCTGTGGGAGAATCGTCAGAGTTCGCCAGTGACAAGAGTCAACATTGCGCAGCAATAA", - "dna_sequence_length": 996, - "functions": [ - "putative sugar ABC transporter permease" - ], - "id": "CDS_4148", - "location": [ - [ - "NC_000913", - 4453583, - "+", - 996 - ] - ], - "md5": "13d5a247d04c66c73c02529cc11b2382", - "parent_gene": "", - "protein_md5": "caa210325f5b3c869097691e91636117", - "protein_translation": "MIKRNLPLMITIGVFVLGYLYCLTQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKVIGDFGLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGGRLSAMGLLMLAVVVIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAGVGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQSSPVTRVNIAQQ", - "protein_translation_length": 331, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948753" - ], - [ - "gene_synonym", - "fbp" - ], - [ - "gene_synonym", - "EcoGene:EG10283" - ], - [ - "gene_synonym", - "b4232" - ], - [ - "gene_synonym", - "ASAP:ABE-0013842" - ], - [ - "gene_synonym", - "JW4191" - ], - [ - "gene_synonym", - "fdp" - ], - [ - "gene_synonym", - "NP_418653.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A993" - ], - [ - "gene_synonym", - "GI:16132054" - ], - [ - "gene_synonym", - "ECK4227" - ] - ], - "dna_sequence": "ATGAAAACGTTAGGTGAATTTATTGTCGAAAAGCAGCACGAGTTTTCTCATGCTACCGGTGAGCTCACTGCTTTGCTGTCGGCAATAAAACTGGGCGCCAAGATTATCCATCGCGATATCAACAAAGCAGGACTGGTTGATATCCTGGGTGCCAGCGGTGCTGAGAACGTGCAGGGCGAGGTTCAGCAGAAACTCGACTTGTTCGCTAATGAAAAACTGAAAGCCGCACTGAAAGCACGCGATATCGTTGCGGGCATTGCCTCTGAAGAAGAAGATGAGATTGTCGTCTTTGAAGGCTGTGAACACGCAAAATACGTGGTGCTGATGGACCCCCTGGATGGCTCGTCCAACATCGATGTTAACGTCTCTGTCGGTACCATTTTCTCCATCTACCGCCGCGTTACGCCTGTTGGCACGCCGGTAACGGAAGAAGATTTCCTCCAGCCTGGTAACAAACAGGTTGCGGCAGGTTACGTGGTATACGGCTCCTCTACCATGCTGGTTTACACCACCGGATGCGGTGTTCACGCCTTTACTTACGATCCTTCGCTCGGCGTTTTCTGCCTGTGCCAGGAACGGATGCGCTTCCCGGAGAAAGGCAAAACCTACTCCATCAACGAAGGAAACTACATTAAGTTTCCGAACGGGGTGAAGAAGTACATTAAATTCTGCCAGGAAGAAGATAAATCCACCAACCGCCCTTATACCTCACGTTATATCGGTTCACTGGTCGCGGATTTCCACCGTAACCTGCTGAAAGGCGGTATTTATCTCTACCCAAGCACCGCCAGCCACCCGGACGGCAAACTGCGTTTGCTGTATGAGTGCAACCCGATGGCATTCCTGGCGGAACAAGCGGGCGGTAAAGCGAGCGATGGCAAAGAGCGTATTCTGGATATCATCCCGGAAACCCTGCACCAGCGCCGTTCATTCTTTGTCGGCAACGACCATATGGTTGAAGATGTCGAACGCTTTATCCGTGAGTTCCCGGACGCGTAA", - "dna_sequence_length": 999, - "functions": [ - "fructose-1,6-bisphosphatase I" - ], - "id": "CDS_4149", - "location": [ - [ - "NC_000913", - 4455609, - "-", - 999 - ] - ], - "md5": "f6959cc7fd2fd141af29d9953aef69b4", - "parent_gene": "", - "protein_md5": "6dce545efd3bad72b609138fd3a8b0fe", - "protein_translation": "MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA", - "protein_translation_length": 332, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948752" - ], - [ - "gene_synonym", - "tpl" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37773" - ], - [ - "gene_synonym", - "NP_418654.1" - ], - [ - "gene_synonym", - "mpl" - ], - [ - "gene_synonym", - "b4233" - ], - [ - "gene_synonym", - "yjfG" - ], - [ - "gene_synonym", - "JW4192" - ], - [ - "gene_synonym", - "ECK4228" - ], - [ - "gene_synonym", - "ASAP:ABE-0013847" - ], - [ - "gene_synonym", - "GI:16132055" - ], - [ - "gene_synonym", - "EcoGene:EG12440" - ] - ], - "dna_sequence": "ATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGGGCGGTCTGGCGATGCTGGCGCGCCAGTTAGGCCATGAAGTAACGGGTTCGGACGCCAATGTGTATCCGCCGATGAGCACCTTACTTGAGAAGCAAGGCATTGAGCTGATTCAGGGGTACGATGCCAGCCAGCTCGAGCCGCAGCCGGATCTGGTGATTATTGGCAACGCCATGACCCGTGGAAATCCGTGTGTGGAAGCGGTACTGGAAAAAAATATCCCTTATATGTCAGGTCCACAGTGGCTGCACGATTTTGTGCTGCGCGACCGCTGGGTGCTGGCCGTTGCCGGTACACACGGCAAAACCACCACCGCGGGAATGGCGACCTGGATTCTGGAACAGTGTGGTTACAAACCGGGCTTTGTAATCGGCGGTGTGCCGGGGAACTTTGAGGTTTCGGCTCATCTGGGCGAAAGCGACTTCTTTGTTATCGAAGCGGATGAGTATGACTGCGCCTTCTTCGACAAACGCTCTAAATTTGTTCATTACTGCCCGCGTACGCTGATCCTCAACAACCTTGAGTTCGATCACGCCGATATCTTTGACGACCTGAAAGCGATCCAGAAACAGTTCCACCATCTGGTGCGTATCGTTCCGGGGCAGGGCCGTATTATCTGGCCGGAAAATGACATCAACCTGAAACAGACCATGGCGATGGGCTGCTGGAGCGAGCAGGAGCTGGTGGGTGAGCAGGGTCACTGGCAGGCGAAAAAGCTGACCACCGATGCTTCCGAATGGGAAGTTTTGCTGGATGGCGAAAAAGTGGGCGAAGTGAAATGGTCGCTGGTAGGCGAACATAATATGCACAATGGCCTGATGGCGATTGCAGCGGCTCGCCATGTTGGTGTAGCGCCGGCAGATGCCGCTAACGCGCTGGGTTCGTTTATTAATGCTCGTCGCCGTCTGGAGTTGCGTGGTGAAGCGAATGGCGTCACGGTATATGACGATTTTGCCCATCACCCGACGGCGATTCTGGCAACGCTGGCGGCGCTGCGTGGCAAAGTTGGTGGTACGGCGCGCATTATTGCTGTGCTGGAGCCGCGCTCGAATACCATGAAAATGGGGATCTGCAAAGACGATCTGGCACCTTCATTAGGTCGTGCCGATGAAGTCTTCCTGCTGCAACCGGCGCATATTCCGTGGCAGGTGGCAGAAGTGGCAGAAGCCTGCGTTCAGCCTGCACACTGGAGTGGCGATGTGGATACGCTGGCAGATATGGTGGTGAAAACCGCTCAGCCTGGCGACCATATTCTGGTGATGAGCAACGGCGGTTTTGGTGGGATCCATCAGAAACTGCTGGATGGGCTGGCGAAGAAGGCGGAAGCCGCGCAGTAA", - "dna_sequence_length": 1374, - "functions": [ - "UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase" - ], - "id": "CDS_4150", - "location": [ - [ - "NC_000913", - 4455785, - "+", - 1374 - ] - ], - "md5": "e2bc19b796efe6bbffa97b3f83857159", - "parent_gene": "", - "protein_md5": "781f6f3c513a8c14b2db759e5f9ff879", - "protein_translation": "MRIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEKQGIELIQGYDASQLEPQPDLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRDRWVLAVAGTHGKTTTAGMATWILEQCGYKPGFVIGGVPGNFEVSAHLGESDFFVIEADEYDCAFFDKRSKFVHYCPRTLILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRIIWPENDINLKQTMAMGCWSEQELVGEQGHWQAKKLTTDASEWEVLLDGEKVGEVKWSLVGEHNMHNGLMAIAAARHVGVAPADAANALGSFINARRRLELRGEANGVTVYDDFAHHPTAILATLAALRGKVGGTARIIAVLEPRSNTMKMGICKDDLAPSLGRADEVFLLQPAHIPWQVAEVAEACVQPAHWSGDVDTLADMVVKTAQPGDHILVMSNGGFGGIHQKLLDGLAKKAEAAQ", - "protein_translation_length": 457, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948751" - ], - [ - "gene_synonym", - "yjgA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8X0" - ], - [ - "gene_synonym", - "NP_418655.1" - ], - [ - "gene_synonym", - "JW4193" - ], - [ - "gene_synonym", - "ASAP:ABE-0013850" - ], - [ - "gene_synonym", - "EcoGene:EG11410" - ], - [ - "gene_synonym", - "ECK4229" - ], - [ - "gene_synonym", - "b4234" - ], - [ - "gene_synonym", - "GI:16132056" - ] - ], - "dna_sequence": "ATGACTAAGCAGCCCGAAGACTGGCTCGACGACGTTCCCGGTGATGACATCGAAGACGAAGACGATGAAATTATCTGGGTCAGTAAAAGTGAAATTAAACGTGATGCCGAGGAGCTAAAACGCCTTGGCGCGGAAATTGTTGATCTGGGGAAAAACGCGCTGGATAAGATCCCGTTAGATGCGGATCTGCGCGCGGCTATTGAGCTCGCCCAGCGTATTAAGATGGAAGGTCGCCGCCGCCAGTTGCAGCTCATCGGTAAGATGCTGCGCCAGCGCGACGTAGAGCCTATTCGTCAGGCGCTGGATAAGCTGAAAAACCGTCACAACCAGCAGGTGGTGCTGTTCCATAAACTGGAAAACCTGCGCGATCGTCTGATCGATCAAGGTGATGACGCCATCGCTGAGGTATTAAATCTGTGGCCCGATGCCGATCGTCAGCAACTGCGTACTCTGATCCGCAACGCGAAGAAAGAGAAAGAAGGGAATAAGCCGCCGAAATCCGCACGCCAGATTTTCCAGTATCTGCGCGAGTTAGCGGAGAACGAAGGGTAA", - "dna_sequence_length": 552, - "functions": [ - "ribosome-associated UPF0307 family protein" - ], - "id": "CDS_4151", - "location": [ - [ - "NC_000913", - 4457865, - "-", - 552 - ] - ], - "md5": "e1f9c6ee32ac4e4f2fe655f39d3a9b7c", - "parent_gene": "", - "protein_md5": "9718f16e2e82da45c9a8064a1edf0d72", - "protein_translation": "MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGAEIVDLGKNALDKIPLDADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALDKLKNRHNQQVVLFHKLENLRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKEGNKPPKSARQIFQYLRELAENEG", - "protein_translation_length": 183, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948750" - ], - [ - "gene_synonym", - "EcoGene:EG10741" - ], - [ - "gene_synonym", - "b4235" - ], - [ - "gene_synonym", - "mcb" - ], - [ - "gene_synonym", - "GI:16132057" - ], - [ - "gene_synonym", - "JW4194" - ], - [ - "gene_synonym", - "ASAP:ABE-0013854" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AFK0" - ], - [ - "gene_synonym", - "pmbA" - ], - [ - "gene_synonym", - "NP_418656.1" - ], - [ - "gene_synonym", - "tldE" - ], - [ - "gene_synonym", - "ECK4230" - ] - ], - "dna_sequence": "ATGGCACTTGCAATGAAAGTAATCTCTCAAGTTGAAGCGCAGCGCAAGATTCTGGAAGAAGCAGTTTCCACTGCGCTGGAGTTGGCCTCAGGCAAATCGGACGGTGCGGAAGTTGCCGTCAGCAAGACCACCGGCATTAGCGTAAGCACGCGTTATGGTGAAGTGGAGAATGTTGAATTCAATAGCGATGGCGCGCTGGGGATCACTGTTTATCACCAGAACCGCAAAGGTAGCGCATCATCCACCGATTTAAGCCCGCAGGCCATTGCCCGTACTGTACAGGCGGCGCTGGATATTGCCCGTTATACCTCGCCAGATCCCTGTGCCGGCGTGGCAGACAAAGAGCTGCTGGCCTTTGACGCACCAGATCTCGACTTGTTCCACCCTGCGGAAGTTTCCCCGGATGAAGCCATTGAACTGGCGGCCCGCGCAGAACAGGCGGCATTGCAGGCGGACAAACGCATCACCAATACCGAAGGTGGCAGCTTTAACAGCCACTACGGTGTCAAAGTTTTTGGCAACAGCCACGGCATGTTGCAGGGTTACTGCTCAACGCGTCATTCGCTCTCCAGCTGTGTAATTGCCGAAGAAAATGGCGATATGGAGCGTGATTACGCCTACACCATTGGTCGTGCGATGAGCGATCTGCAAACGCCAGAGTGGGTTGGGGCCGACTGTGCTCGCCGTACTTTATCGCGTCTGTCACCGCGTAAACTCTCCACCATGAAAGCGCCAGTCATTTTTGCCAATGAAGTGGCAACCGGGCTTTTTGGGCATCTGGTGGGGGCGATAGCGGGTGGATCGGTTTATCGTAAATCTACCTTCCTGCTGGATTCGCTGGGTAAACAAATTCTGCCGGACTGGCTGACCATTGAAGAGCATCCGCATCTGCTGAAAGGGCTGGCGTCGACGCCATTCGACAGCGAAGGTGTGCGCACCGAGCGTCGCGATATTATTAAAGATGGCATCCTGACTCAGTGGCTGCTGACCAGCTACTCGGCGCGGAAACTGGGGCTGAAAAGCACCGGACATGCGGGCGGTATTCACAACTGGCGGATTGCCGGACAAGGTCTAAGCTTCGAGCAGATGCTCAAAGAGATGGGCACCGGGCTGGTGGTGACGGAATTGATGGGCCAGGGCGTGAGTGCCATTACCGGTGATTATTCCCGTGGTGCAGCGGGCTTCTGGGTAGAGAATGGCGAAATTCAGTATCCGGTGAGCGAAATCACCATCGCAGGTAATTTAAAAGATATGTGGCGCAATATTGTCACCGTCGGTAACGATATTGAAACACGCAGTAATATACAGTGTGGTTCTGTGCTGTTGCCGGAGATGAAAATCGCCGGACAGTAA", - "dna_sequence_length": 1353, - "functions": [ - "putative antibiotic peptide MccB17 maturation peptidase" - ], - "id": "CDS_4152", - "location": [ - [ - "NC_000913", - 4457959, - "+", - 1353 - ] - ], - "md5": "09fb961e57a9bd29546acf6aa0ae318c", - "parent_gene": "", - "protein_md5": "d29caf3d891e07fc006be50965ca02db", - "protein_translation": "MALAMKVISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTTGISVSTRYGEVENVEFNSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARYTSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEGGSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFLLDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTSYSARKLGLKSTGHAGGIHNWRIAGQGLSFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGAAGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ", - "protein_translation_length": 450, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABE7" - ], - [ - "gene_synonym", - "GeneID:948758" - ], - [ - "gene_synonym", - "b4236" - ], - [ - "gene_synonym", - "cybC" - ], - [ - "gene_synonym", - "JW4195" - ], - [ - "gene_synonym", - "EcoGene:EG50008" - ], - [ - "gene_synonym", - "ASAP:ABE-0013858" - ], - [ - "gene_synonym", - "ECK4231" - ] - ], - "dna_sequence": "ATTCTTGCAGTCTCCTCGTTGGTATTCAGTTCGGCGTCATTTGCTGCTGATCTCGAAGACAATATGGAAACCCTCAACGACAATTTAAAAGTGGTCGAAAAAGCCGATAACGCGGCGCAAGTCAAAGACGCGTTAACGAAGATGCGCGCCGCAGCGCTGGATGCGCAAAAAGCAACGCCGCCGAAGCTCGAAGATAAATCACCGGACAGCCCGGAAATGAAAGATTTCCGCCACGGTTTCGACATTCTGGTCGGTCAGATTGACGACGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAA", - "dna_sequence_length": 366, - "id": "CDS_4153", - "location": [ - [ - "NC_000913", - 4459490, - "+", - 366 - ] - ], - "md5": "9256a449cbac338ecc7401d03d7697d7", - "parent_gene": "", - "protein_md5": "a00cd79ee0d295ab2d760b6670fea22a", - "protein_translation": "ILAVSSLVFSSASFAADLEDNMETLNDNLKVVEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNSYHKKYR", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "nrdG" - ], - [ - "gene_synonym", - "EcoGene:EG12523" - ], - [ - "gene_synonym", - "GeneID:948757" - ], - [ - "gene_synonym", - "yjgE" - ], - [ - "gene_synonym", - "b4237" - ], - [ - "gene_synonym", - "GI:16132059" - ], - [ - "gene_synonym", - "NP_418658.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013860" - ], - [ - "gene_synonym", - "JW4196" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9N8" - ], - [ - "gene_synonym", - "ECK4232" - ] - ], - "dna_sequence": "ATGAATTATCATCAGTACTATCCTGTCGACATCGTCAACGGCCCCGGCACTCGTTGCACCCTGTTTGTCTCCGGGTGTGTTCATGAATGCCCCGGTTGCTATAACAAAAGCACATGGCGGGTAAATTCCGGTCAGCCATTTACCAAAGCAATGGAAGACCAGATCATTAACGATCTGAATGACACTCGTATCAAACGCCAGGGTATTTCCCTCTCCGGCGGCGATCCGCTGCATCCGCAAAACGTGCCGGATATTCTGAAACTGGTACAACGCATCCGCGCCGAGTGTCCGGGTAAAGACATCTGGGTGTGGACAGGCTATAAACTCGACGAACTCAACGCTGCGCAAATGCAGGTTGTTGATTTGATTAACGTGCTGGTCGACGGCAAATTTGTGCAGGATTTAAAAGACCCTTCCCTGATCTGGCGCGGCAGCAGCAATCAGGTGGTGCATCATTTGCGATGA", - "dna_sequence_length": 465, - "functions": [ - "anaerobic ribonucleotide reductase activating protein" - ], - "id": "CDS_4154", - "location": [ - [ - "NC_000913", - 4460364, - "-", - 465 - ] - ], - "md5": "6f3fb4ee8686a9bcf76c6d2a8af48455", - "parent_gene": "", - "protein_md5": "f0d1233ca95f743a927fe329d7424072", - "protein_translation": "MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSGQPFTKAMEDQIINDLNDTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIWVWTGYKLDELNAAQMQVVDLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR", - "protein_translation_length": 154, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4238" - ], - [ - "gene_synonym", - "nrdD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28903" - ], - [ - "gene_synonym", - "EcoGene:EG11417" - ], - [ - "gene_synonym", - "NP_418659.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013865" - ], - [ - "gene_synonym", - "JW4197" - ], - [ - "gene_synonym", - "GI:16132060" - ], - [ - "gene_synonym", - "ECK4233" - ], - [ - "gene_synonym", - "GeneID:948755" - ] - ], - "dna_sequence": "ATGACACCGCATGTGATGAAACGAGACGGCTGCAAAGTGCCGTTTAAATCAGAGCGCATCAAAGAAGCGATTCTGCGTGCAGCTAAAGCAGCGGAAGTCGATGATGCCGATTATTGCGCCACTGTTGCCGCGGTTGTCAGCGAGCAGATGCAGGGCCGCAACCAGGTGGATATCAATGAGATCCAGACCGCAGTTGAAAATCAGCTGATGTCAGGTCCATACAAACAACTGGCTCGTGCTTACATCGAGTACCGTCACGATCGCGACATTGAACGTGAAAAACGCGGTCGCCTGAACCAGGAGATCCGTGGTCTGGTCGAGCAGACCAACGCCTCGTTACTCAACGAAAACGCCAACAAAGACAGCAAGGTGATTCCAACCCAGCGCGACCTGCTGGCCGGGATCGTGGCTAAACACTATGCACGTCAGCACCTGCTGCCGCGTGACGTGGTGCAGGCACATGAGCGTGGCGATATTCACTATCACGATCTCGATTACTCACCGTTCTTCCCGATGTTCAACTGCATGTTGATCGACCTGAAAGGCATGCTGACCCAGGGCTTTAAAATGGGGAACGCCGAGATTGAACCGCCGAAGTCGATCTCTACGGCAACCGCGGTAACTGCGCAGATTATTGCTCAGGTTGCCAGCCATATTTATGGCGGCACCACCATTAACCGTATCGATGAAGTGCTGGCACCGTTTGTCACTGCCAGCTACAACAAACATCGCAAGACCGCAGAAGAGTGGAACATCCCGGACGCCGAAGGCTACGCTAACTCTCGAACCATCAAAGAGTGCTACGATGCCTTCCAGTCACTGGAGTACGAAGTAAACACCCTGCACACCGCCAACGGTCAGACGCCGTTTGTAACCTTTGGTTTTGGCCTGGGCACCAGCTGGGAATCGCGCCTGATTCAGGAATCGATCCTGCGTAACCGTATCGCAGGCCTCGGTAAAAACCGTAAAACTGCGGTGTTCCCGAAACTGGTGTTTGCGATTCGCGATGGCCTGAACCATAAAAAAGGCGATCCGAACTACGACATCAAACAGCTGGCGCTGGAGTGCGCAAGCAAGCGCATGTATCCGGATATCCTGAACTACGATCAGGTAGTGAAAGTCACCGGTTCGTTTAAAACTCCGATGGGCTGCCGCAGCTTCCTCGGCGTGTGGGAAAATGAAAACGGCGAGCAGATCCACGATGGTCGTAACAACCTCGGCGTGATCAGCCTGAACCTGCCGCGTATTGCTCTGGAAGCAAAAGGCGATGAAGCCACCTTCTGGAAGCTGCTGGATGAACGTCTGGTGCTGGCACGTAAGGCGCTGATGACCCGTATCGCTCGTCTCGAAGGCGTGAAAGCGCGCGTGGCCCCGATCCTCTATATGGAAGGTGCTTGTGGCGTGCGTCTCAATGCTGACGATGATGTTTCTGAAATCTTCAAAAACGGTCGTGCGTCTATTTCGCTGGGTTACATCGGCATCCACGAAACCATTAACGCGCTGTTCGGCGGCGAGCATGTTTACGACAACGAGCAGCTTCGCGCGAAAGGTATCGCCATTGTTGAACGTCTGCGTCAGGCAGTGGATCAGTGGAAAGAAGAAACGGGTTATGGTTTCAGTCTCTACAGCACGCCGAGTGAAAACCTGTGCGATCGCTTCTGCCGTCTCGATACTGCTGAGTTTGGCGTGGTGCCGGGCGTGACCGATAAAGGTTACTACACCAACAGTTTCCACCTCGATGTGGAGAAGAAGGTGAACCCGTACGACAAGATCGACTTTGAAGCGCCTTACCCGCCGCTGGCGAACGGTGGTTTCATTTGCTACGGCGAGTATCCAAACATTCAGCACAACCTGAAGGCGCTGGAAGATGTCTGGGATTACAGCTATCAGCATGTACCGTATTACGGCACCAATACACCGATTGATGAGTGCTACGAGTGTGGCTTTACCGGTGAGTTCGAGTGCACCAGCAAAGGCTTCACTTGCCCGAAATGTGGTAACCATGACGCCTCCCGTGTGTCGGTAACTCGCCGCGTGTGCGGATATTTAGGTAGCCCGGATGCACGTCCGTTTAACGCTGGTAAGCAGGAAGAAGTTAAGCGCCGCGTTAAACATTTGGGGAATGGGCAGATAGGTTAA", - "dna_sequence_length": 2139, - "functions": [ - "anaerobic ribonucleoside-triphosphate reductase" - ], - "id": "CDS_4155", - "location": [ - [ - "NC_000913", - 4462660, - "-", - 2139 - ] - ], - "md5": "23f00962bb99b6547d568bdaff954de5", - "parent_gene": "", - "protein_md5": "1e679e31a4025e71e592af82d9aec514", - "protein_translation": "MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG", - "protein_translation_length": 712, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "olgH" - ], - [ - "gene_synonym", - "b4239" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28904" - ], - [ - "gene_synonym", - "treC" - ], - [ - "gene_synonym", - "GeneID:948762" - ], - [ - "gene_synonym", - "treE" - ], - [ - "gene_synonym", - "EcoGene:EG11402" - ], - [ - "gene_synonym", - "GI:16132061" - ], - [ - "gene_synonym", - "NP_418660.1" - ], - [ - "gene_synonym", - "JW4198" - ], - [ - "gene_synonym", - "ECK4234" - ], - [ - "gene_synonym", - "ASAP:ABE-0013870" - ] - ], - "dna_sequence": "ATGACTCATCTTCCCCACTGGTGGCAAAACGGCGTTATCTACCAGATTTATCCAAAGAGTTTTCAGGACACCACGGGTAGCGGTACCGGCGATTTACGTGGCGTTATCCAACACCTGGACTATCTGCATAAACTGGGCGTTGATGCCATCTGGCTAACCCCCTTTTATGTCTCTCCCCAGGTCGATAACGGTTACGACGTAGCGAACTATACGGCGATTGATCCCACCTACGGCACGCTGGACGATTTTGACGAACTGGTGACGCAGGCAAAATCGCGCGGGATTCGTATCATTCTCGATATGGTGTTTAACCATACCTCTACCCAACATGCCTGGTTTCGCGAGGCGCTGAACAAAGAAAGCCCTTACCGCCAGTTTTATATCTGGCGCGATGGAGAACCAGAAACGCCACCGAACAACTGGCGTTCAAAATTTGGCGGTAGTGCGTGGCGCTGGCATGCGGAAAGCGAACAGTACTATTTGCATCTCTTTGCACCAGAACAGGCGGATCTCAACTGGGAGAATCCAGCGGTACGCGCAGAGCTGAAAAAAGTCTGTGAGTTCTGGGCCGATCGTGGGGTCGACGGGTTGCGCCTGGATGTGGTGAATCTGATCTCCAAAGACCCGCGTTTCCCTGAAGACCTGGACGGCGACGGGCGTCGCTTCTACACCGACGGGCCACGAGCACACGAGTTTTTGCACGAGATGAACCGCGATGTGTTTACGCCACGCGGGTTAATGACCGTAGGTGAAATGTCCTCCACCAGCCTTGAGCATTGCCAGCGATACGCGGCTCTGACAGGCAGTGAATTGTCGATGACCTTTAATTTTCATCACCTGAAGGTCGATTATCCCGGTGGTGAAAAATGGACGCTGGCTAAACCTGACTTTGTGGCGTTGAAAACATTGTTCCGCCACTGGCAACAAGGAATGCACAACGTAGCATGGAATGCCTTGTTCTGGTGTAACCACGATCAGCCGCGCATTGTTTCTCGCTTTGGTGATGAAGGTGAATACCGCGTGCCTGCGGCAAAAATGCTGGCGATGGTGCTGCATGGCATGCAGGGAACGCCGTATATCTACCAGGGCGAAGAGATTGGCATGACCAACCCGCATTTCACGCGCATTACTGACTATCGCGACGTAGAGAGCCTCAATATGTTTGCCGAGCTGCGCAACGATGGGCGTGATGCCGACGAGTTATTGGCAATCCTCGCCAGTAAATCCCGTGACAACAGTCGCACGCCCATGCAATGGAGCAACGGCGATAATGCCGGGTTTACGGCTGGCGAACCGTGGATTGGCCTGGGCGATAACTATCAACAAATCAACGTAGAAGCCGCGCTGGCCGATGATTCCTCGGTGTTTTACACCTACCAAAAGTTAATCGCACTGCGTAAGCAGGAAGCCATCCTGACATGGGGCAATTACCAGGATCTGCTGCCAAACAGCCCTGTATTGTGGTGCTATCGCCGTGAATGGAAGGGGCAAACCTTGCTGGTCATTGCCAACCTTAGCCGTGAGATCCAACCCTGGCAGGCAGGGCAAATGCGCGGCAACTGGCAGCTTGTGATGCATAACTACGAAGAAGCCTCACCACAACCCTGTGCCATGAATTTACGGCCTTTTGAGGCTGTCTGGTGGTTACAGAAGTAA", - "dna_sequence_length": 1656, - "functions": [ - "trehalose-6-P hydrolase" - ], - "id": "CDS_4156", - "location": [ - [ - "NC_000913", - 4464709, - "-", - 1656 - ] - ], - "md5": "19297d58f86e2ae503b4e21a5600cdef", - "parent_gene": "", - "protein_md5": "4ddead4311e0d6cac4e194807ecd63fd", - "protein_translation": "MTHLPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVIQHLDYLHKLGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVTQAKSRGIRIILDMVFNHTSTQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLISKDPRFPEDLDGDGRRFYTDGPRAHEFLHEMNRDVFTPRGLMTVGEMSSTSLEHCQRYAALTGSELSMTFNFHHLKVDYPGGEKWTLAKPDFVALKTLFRHWQQGMHNVAWNALFWCNHDQPRIVSRFGDEGEYRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESLNMFAELRNDGRDADELLAILASKSRDNSRTPMQWSNGDNAGFTAGEPWIGLGDNYQQINVEAALADDSSVFYTYQKLIALRKQEAILTWGNYQDLLPNSPVLWCYRREWKGQTLLVIANLSREIQPWQAGQMRGNWQLVMHNYEEASPQPCAMNLRPFEAVWWLQK", - "protein_translation_length": 551, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12127" - ], - [ - "gene_synonym", - "NP_418661.1" - ], - [ - "gene_synonym", - "GeneID:948761" - ], - [ - "gene_synonym", - "treB" - ], - [ - "gene_synonym", - "b4240" - ], - [ - "gene_synonym", - "JW4199" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36672" - ], - [ - "gene_synonym", - "ECK4235" - ], - [ - "gene_synonym", - "ASAP:ABE-0013872" - ], - [ - "gene_synonym", - "GI:16132062" - ] - ], - "dna_sequence": "ATGATGAGCAAAATAAACCAAACGGATATCGATCGGTTGATTGAACTGGTCGGCGGGCGCGGCAATATTGCGACGGTGAGCCACTGTATTACTCGCCTACGCTTTGTCCTCAACCAACCGGCCAATGCCAGACCGAAAGAAATTGAGCAACTCCCTATGGTGAAAGGCTGTTTCACCAATGCCGGGCAATTTCAGGTGGTGATTGGCACCAACGTGGGTGATTACTATCAAGCACTGATTGCGTCAACCGGACAGGCGCAGGTTGATAAAGAGCAGGTAAAAAAAGCCGCCCGGCATAATATGAAATGGCATGAGCAGTTGATCTCTCATTTCGCGGTGATCTTCTTCCCGTTGCTGCCCGCGTTGATTAGCGGCGGTTTGATCCTCGGTTTTCGCAATGTGATCGGCGATTTGCCCATGAGCAACGGTCAGACGCTGGCGCAAATGTACCCTTCCCTGCAAACGATCTACGATTTTCTGTGGTTGATCGGTGAAGCGATCTTCTTCTACCTGCCGGTCGGTATTTGCTGGTCAGCGGTGAAAAAAATGGGCGGCACGCCGATCCTTGGTATCGTGCTTGGCGTGACACTGGTTTCTCCACAGCTGATGAACGCTTATCTGCTCGGGCAGCAGCTGCCGGAAGTGTGGGACTTTGGCATGTTCAGCATCGCCAAAGTAGGCTATCAGGCGCAGGTGATCCCGGCACTGTTAGCCGGACTGGCGCTGGGCGTTATTGAAACTCGCCTTAAACGCATCGTGCCGGATTACCTCTATCTGGTGGTGGTACCCGTCTGTTCGCTGATCCTCGCGGTGTTCCTCGCCCATGCGCTGATTGGTCCGTTTGGTCGCATGATTGGCGATGGCGTTGCCTTTGCGGTACGTCACCTGATGACCGGCAGCTTTGCTCCGATTGGCGCAGCATTGTTTGGCTTCCTGTACGCCCCGCTGGTGATCACCGGTGTACACCAGACCACGCTTGCTATTGATTTGCAGATGATTCAAAGCATGGGTGGTACGCCAGTGTGGCCGCTGATTGCGCTGTCGAATATCGCTCAGGGCTCCGCCGTGATAGGCATTATCATTTCCAGCCGCAAGCACAATGAACGCGAGATCTCCGTGCCTGCCGCTATCTCCGCCTGGCTTGGGGTCACTGAGCCTGCAATGTACGGCATCAACCTGAAATATCGCTTCCCGATGCTGTGCGCGATGATTGGTTCTGGTCTGGCAGGATTGCTATGCGGCCTGAACGGCGTTATGGCGAATGGCATCGGCGTAGGCGGCCTGCCGGGAATTCTCTCGATTCAACCGAGCTACTGGCAGGTGTTTGCGCTGGCAATGGCTATCGCCATCATCATCCCGATTGTACTCACCTCGTTTATCTATCAGCGGAAATACCGCCTGGGCACGCTGGACATTGTTTAA", - "dna_sequence_length": 1422, - "functions": [ - "trehalose-specific PTS enzyme: IIB and IIC component" - ], - "id": "CDS_4157", - "location": [ - [ - "NC_000913", - 4466180, - "-", - 1422 - ] - ], - "md5": "04ae6afef11a571de67d0255dbc7cab6", - "parent_gene": "", - "protein_md5": "7fa2c192d6828e914c6ad63eac343409", - "protein_translation": "MMSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANARPKEIEQLPMVKGCFTNAGQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARHNMKWHEQLISHFAVIFFPLLPALISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFLWLIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWDFGMFSIAKVGYQAQVIPALLAGLALGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHALIGPFGRMIGDGVAFAVRHLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDLQMIQSMGGTPVWPLIALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVMANGIGVGGLPGILSIQPSYWQVFALAMAIAIIIPIVLTSFIYQRKYRLGTLDIV", - "protein_translation_length": 473, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16132063" - ], - [ - "gene_synonym", - "ASAP:ABE-0013875" - ], - [ - "gene_synonym", - "NP_418662.1" - ], - [ - "gene_synonym", - "JW4200" - ], - [ - "gene_synonym", - "EcoGene:EG12202" - ], - [ - "gene_synonym", - "GeneID:948760" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P36673" - ], - [ - "gene_synonym", - "ECK4236" - ], - [ - "gene_synonym", - "treR" - ], - [ - "gene_synonym", - "b4241" - ] - ], - "dna_sequence": "ATGCAAAATCGGCTGACCATCAAAGATATCGCGCGCTTAAGCGGCGTGGGGAAATCTACAGTTTCCCGGGTGCTGAATAACGAAAGCGGCGTGAGCCAGCTCACCCGCGAGCGTGTTGAAGCAGTGATGAATCAGCATGGATTTTCCCCTTCCCGCTCTGCGCGCGCTATGCGTGGGCAAAGCGATAAAGTGGTCGCCATCATTGTTACCCGTCTGGATTCGTTGTCAGAAAATCTCGCCGTTCAAACCATGCTGCCAGCGTTCTATGAACAAGGTTACGACCCAATCATGATGGAAAGTCAGTTTTCCCCGCAATTAGTTGCCGAACATTTGGGAGTGCTGAAACGGCGTAATATCGACGGCGTAGTGCTGTTCGGTTTTACTGGCATAACAGAAGAAATGTTAGCCCACTGGCAGTCATCGCTGGTTCTGCTGGCGCGTGACGCAAAAGGCTTTGCTTCGGTCTGTTATGACGACGAAGGGGCAATCAAAATCCTGATGCAACGGCTGTATGACCAGGGGCATCGTAATATCAGTTATCTCGGCGTGCCGCACAGTGACGTGACAACCGGTAAGCGACGTCACGAAGCCTACCTGGCGTTCTGCAAAGCGCATAAACTGCATCCCGTTGCCGCCCTGCCAGGGCTTGCTATGAAGCAAGGCTATGAGAACGTTGCAAAAGTGATTACGCCTGAAACTACCGCCTTACTGTGCGCAACCGACACGCTGGCACTTGGCGCAAGTAAATACCTGCAAGAGCAACGCATCGACACCTTGCAACTGGCGAGCGTCGGTAATACGCCGTTAATGAAATTCCTCCATCCGGAGATCGTAACCGTAGATCCCGGTTACGCCGAAGCTGGACGCCAGGCGGCTTGCCAGTTGATCGCGCAGGTAACCGGGCGCAGCGAACCGCAACAAATCATCATCCCCGCCACCCTGTCCTGA", - "dna_sequence_length": 948, - "functions": [ - "trehalose 6-phosphate-inducible trehalose regulon transcriptional repressor" - ], - "id": "CDS_4158", - "location": [ - [ - "NC_000913", - 4467246, - "-", - 948 - ] - ], - "md5": "966375c6e667f57330e056120b2da398", - "parent_gene": "", - "protein_md5": "4bc4e2950a34015dc197c68f8d50b94b", - "protein_translation": "MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQLTRERVEAVMNQHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCATDTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVTGRSEPQQIIIPATLS", - "protein_translation_length": 315, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG14498" - ], - [ - "gene_synonym", - "GeneID:9797237" - ], - [ - "gene_synonym", - "GI:308209623" - ], - [ - "gene_synonym", - "YP_003933616.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:E2JKY7" - ], - [ - "gene_synonym", - "b4702" - ], - [ - "gene_synonym", - "mgtL" - ], - [ - "gene_synonym", - "ECK4513" - ] - ], - "dna_sequence": "ATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAA", - "dna_sequence_length": 54, - "functions": [ - "regulatory leader peptide for mgtA" - ], - "id": "CDS_4159", - "location": [ - [ - "NC_000913", - 4467431, - "+", - 54 - ] - ], - "md5": "b094b53e5ad78157cdbaf1c6b8947e61", - "parent_gene": "", - "protein_md5": "f11f0a0cd138fc93b923468f234e4779", - "protein_translation": "MEPDPTPLPRRRLKLFR", - "protein_translation_length": 17, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948778" - ], - [ - "gene_synonym", - "corB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ABB8" - ], - [ - "gene_synonym", - "NP_418663.1" - ], - [ - "gene_synonym", - "EcoGene:EG12525" - ], - [ - "gene_synonym", - "JW4201" - ], - [ - "gene_synonym", - "ASAP:ABE-0013883" - ], - [ - "gene_synonym", - "mgt" - ], - [ - "gene_synonym", - "ECK4237" - ], - [ - "gene_synonym", - "mgtA" - ], - [ - "gene_synonym", - "GI:16132064" - ], - [ - "gene_synonym", - "b4242" - ] - ], - "dna_sequence": "ATGTTTAAAGAAATTTTTACCCGGCTCATTCGCCATTTACCTTCCCGTCTGGTTCATCGTGATCCATTGCCTGGCGCGCAGCAGACAGTGAATACGGTGGTCCCGCCGTCCTTAAGTGCGCATTGCCTGAAAATGGCGGTGATGCCCGAAGAAGAATTGTGGAAAACGTTCGACACCCATCCGGAAGGGTTAAATCAGGCGGAAGTGGAATCTGCCCGCGAACAACATGGTGAAAATAAATTACCCGCACAACAACCGTCGCCGTGGTGGGTACATTTATGGGTCTGCTATCGCAACCCCTTTAATATTTTACTCACCATTCTCGGCGCTATTTCTTACGCCACGGAAGATTTATTTGCTGCGGGCGTTATCGCGCTAATGGTCGCTATTTCTACGTTGCTGAACTTTATTCAGGAAGCACGTTCCACTAAAGCGGCAGATGCCCTGAAAGCGATGGTCAGCAATACTGCGACGGTGCTGCGCGTAATTAACGACAAAGGCGAAAATGGCTGGCTGGAGATCCCGATCGACCAGCTGGTGCCCGGCGATATTATAAAACTGGCGGCGGGAGATATGATCCCGGCAGATTTACGTATCTTGCAGGCGCGGGATCTGTTCGTCGCTCAGGCGTCGTTAACCGGTGAGTCTCTGCCCGTAGAAAAAGCCGCTACCACTCGCCAGCCGGAGCACAGCAATCCGCTGGAGTGCGACACGCTGTGTTTTATGGGCACCACCGTGGTGAGCGGCACGGCACAAGCAATGGTGATTGCTACAGGTGCCAATACCTGGTTTGGTCAACTGGCGGGGCGTGTTAGTGAGCAGGAAAGCGAGCCGAATGCCTTTCAGCAAGGGATCAGCCGCGTCAGTATGCTGCTGATTCGCTTTATGCTGGTGATGGCACCGGTGGTGCTGTTAATCAATGGTTACACCAAAGGCGACTGGTGGGAAGCGGCGCTGTTTGCGCTTTCGGTCGCGGTAGGCCTAACGCCGGAAATGTTGCCGATGATTGTTACCTCGACGCTGGCGCGCGGCGCAGTAAAGCTGTCGAAACAGAAAGTGATCGTCAAACATCTGGATGCTATTCAGAACTTTGGCGCAATGGATATTCTGTGCACTGATAAAACCGGCACCCTGACGCAGGATAAAATTGTGCTGGAGAATCATACCGATATCTCCGGTAAAACCAGCGAACGCGTGCTGCATAGCGCGTGGTTGAACAGTCATTATCAGACCGGACTTAAAAACCTGCTCGATACAGCGGTGCTCGAAGGTACGGATGAAGAGTCAGCGCGCTCGCTGGCCAGTCGTTGGCAAAAAATTGATGAGATTCCGTTTGATTTCGAGCGTCGCCGGATGTCGGTGGTAGTGGCAGAAAATACCGAGCACCATCAGCTGGTTTGCAAAGGTGCATTGCAGGAAATCCTCAATGTGTGTTCGCAGGTGCGTCACAATGGCGAGATTGTGCCGCTCGATGACATCATGCTGCGTAAGATTAAGCGGGTTACTGATACGCTGAATCGTCAGGGGCTGCGCGTGGTTGCGGTGGCGACGAAATACCTGCCAGCGCGTGAAGGAGATTACCAGCGGGCGGATGAATCCGACCTGATCCTCGAAGGATATATTGCTTTTCTTGATCCGCCAAAAGAGACAACCGCTCCGGCACTGAAGGCATTAAAAGCGAGTGGAATTACCGTAAAAATCCTTACTGGCGACAGTGAGTTAGTTGCAGCGAAAGTGTGCCATGAAGTGGGGCTGGACGCGGGAGAGGTGGTCATTGGTAGTGATATTGAAACGCTATCTGACGACGAACTGGCAAATCTTGCACAGCGTACCACGCTGTTTGCCCGCCTGACGCCGATGCATAAAGAACGCATTGTGACCTTACTGAAGCGCGAAGGGCATGTGGTTGGCTTTATGGGCGATGGTATTAATGATGCGCCCGCCTTACGCGCTGCGGATATCGGCATTTCTGTGGACGGCGCGGTAGATATTGCCCGTGAAGCGGCTGATATCATCCTGCTGGAAAAAAGCCTGATGGTGCTGGAAGAGGGGGTTATTGAGGGACGTCGCACTTTCGCCAACATGCTGAAATACATCAAAATGACGGCGAGCTCTAACTTCGGTAATGTGTTCAGCGTGCTGGTAGCGAGTGCTTTCTTGCCCTTCCTGCCGATGTTGCCGTTACACTTGCTTATTCAGAACCTGCTGTACGATGTGTCACAGGTGGCGATCCCGTTTGATAACGTCGACGACGAGCAAATTCAAAAGCCGCAGCGTTGGAATCCGGCGGATCTGGGGCGCTTTATGATCTTCTTCGGACCGATCAGCTCGATCTTCGATATTTTGACGTTTTGCCTGATGTGGTGGGTATTCCATGCCAACACGCCGGAAACGCAAACGCTGTTCCAGTCGGGATGGTTTGTGGTGGGCTTACTGTCGCAAACGCTGATTGTGCATATGATCCGCACCCGCCGTGTGCCGTTTATTCAGAGCTGTGCATCGTGGCCGTTAATGATCATGACCGTGATCGTGATGATTGTCGGGATCGCATTGCCGTTTTCACCGCTGGCCAGTTATCTGCAATTACAGGCGCTGCCGTTAAGCTATTTCCCGTGGCTGGTTGCGATTCTGGCAGGGTATATGACATTAACCCAGTTGGTGAAAGGGTTCTATAGCCGTCGTTACGGCTGGCAATAA", 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"MFKEIFTRLIRHLPSRLVHRDPLPGAQQTVNTVVPPSLSAHCLKMAVMPEEELWKTFDTHPEGLNQAEVESAREQHGENKLPAQQPSPWWVHLWVCYRNPFNILLTILGAISYATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKAATTRQPEHSNPLECDTLCFMGTTVVSGTAQAMVIATGANTWFGQLAGRVSEQESEPNAFQQGISRVSMLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKHLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGITVKILTGDSELVAAKVCHEVGLDAGEVVIGSDIETLSDDELANLAQRTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADLGRFMIFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRVPFIQSCASWPLMIMTVIVMIVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFYSRRYGWQ", - "protein_translation_length": 898, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418664.2" - ], - [ - "gene_synonym", - "GeneID:948771" - ], - [ - "gene_synonym", - "ASAP:ABE-0013886" - ], - [ - "gene_synonym", - "yjgF" - ], - [ - "gene_synonym", - "EcoGene:EG12524" - ], - [ - "gene_synonym", - "GI:90111711" - ], - [ - "gene_synonym", - "ridA" - ], - [ - "gene_synonym", - "JW5755" - ], - [ - "gene_synonym", - "ECK4238" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF93" - ], - [ - "gene_synonym", - "b4243" - ] - ], - "dna_sequence": "ATGAGCAAAACTATCGCGACGGAAAATGCACCGGCAGCTATCGGTCCTTACGTACAGGGCGTTGATCTGGGCAATATGATCATCACCTCCGGTCAGATCCCGGTAAATCCGAAAACGGGCGAAGTACCGGCAGACGTCGCTGCACAGGCACGTCAGTCGCTGGATAACGTAAAAGCGATCGTCGAAGCCGCTGGCCTGAAAGTGGGCGACATCGTTAAAACTACCGTGTTTGTAAAAGATCTGAACGACTTCGCAACCGTAAACGCCACTTACGAAGCCTTCTTCACCGAACACAACGCCACCTTCCCGGCACGTTCTTGCGTTGAAGTTGCCCGTCTGCCGAAAGACGTGAAGATTGAGATCGAAGCGATCGCTGTTCGTCGCTAA", - "dna_sequence_length": 387, - "functions": [ - "enamine/imine deaminase, reaction intermediate detoxification" - ], - "id": "CDS_4161", - "location": [ - [ - "NC_000913", - 4470913, - "-", - 387 - ] - ], - "md5": "2469f58dbe1cdf8597f60c23a389a6ad", - "parent_gene": "", - "protein_md5": "d14ba95667ec939b3c82f5d87a3b9a28", - "protein_translation": "MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR", - "protein_translation_length": 128, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418665.1" - ], - [ - "gene_synonym", - "EcoGene:EG10811" - ], - [ - "gene_synonym", - "pyrI" - ], - [ - "gene_synonym", - "GeneID:948763" - ], - [ - "gene_synonym", - "JW4203" - ], - [ - "gene_synonym", - "ECK4239" - ], - [ - "gene_synonym", - "b4244" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A7F3" - ], - [ - "gene_synonym", - "ASAP:ABE-0013889" - ], - [ - "gene_synonym", - "GI:16132066" - ] - ], - "dna_sequence": "ATGACACACGATAATAAATTGCAGGTTGAAGCTATTAAACGCGGCACGGTAATTGACCATATCCCCGCCCAGATCGGTTTTAAGCTGTTGAGTCTGTTCAAGCTGACCGAAACGGATCAGCGCATCACCATTGGTCTGAACCTGCCTTCTGGCGAGATGGGCCGCAAAGATCTGATCAAAATCGAAAATACCTTTTTGAGTGAAGATCAAGTAGATCAACTGGCATTGTATGCGCCGCAAGCCACGGTTAACCGTATCGACAACTATGAAGTGGTGGGTAAATCGCGCCCAAGTCTGCCGGAGCGCATCGACAATGTGCTGGTCTGCCCGAACAGCAACTGTATCAGCCATGCCGAACCGGTTTCATCCAGCTTTGCCGTGCGAAAACGCGCCAATGATATCGCGCTCAAATGCAAATACTGTGAAAAAGAGTTTTCCCATAATGTGGTGCTGGCCAATTAA", - "dna_sequence_length": 462, - "functions": [ - "aspartate carbamoyltransferase, regulatory subunit" - ], - "id": "CDS_4162", - "location": [ - [ - "NC_000913", - 4471447, - "-", - 462 - ] - ], - "md5": "92c6c473f7652f8c8fc2a81188ab9816", - "parent_gene": "", - "protein_md5": "3b4798139750e07d544a7cf29d8b335c", - "protein_translation": "MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEPVSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN", - "protein_translation_length": 153, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A786" - ], - [ - "gene_synonym", - "EcoGene:EG10805" - ], - [ - "gene_synonym", - "ECK4240" - ], - [ - "gene_synonym", - "ASAP:ABE-0013892" - ], - [ - "gene_synonym", - "GeneID:948767" - ], - [ - "gene_synonym", - "JW4204" - ], - [ - "gene_synonym", - "NP_418666.1" - ], - [ - "gene_synonym", - "b4245" - ], - [ - "gene_synonym", - "pyrB" - ], - [ - "gene_synonym", - "GI:16132067" - ] - ], - "dna_sequence": "ATGGCTAATCCGCTATATCAGAAACATATCATTTCCATAAACGACCTTAGTCGCGATGACCTTAATCTGGTGCTGGCGACAGCGGCGAAACTGAAAGCAAACCCGCAACCAGAGCTGTTGAAGCACAAAGTCATTGCCAGCTGTTTCTTCGAAGCCTCTACCCGTACCCGCCTCTCTTTCGAAACATCTATGCACCGCCTGGGGGCCAGCGTGGTGGGCTTCTCCGACAGCGCCAATACATCACTGGGTAAAAAGGGCGAAACGCTGGCCGATACCATTTCGGTTATCAGCACTTACGTCGATGCGATAGTGATGCGTCATCCGCAGGAAGGTGCGGCGCGCCTGGCCACCGAGTTTTCCGGCAATGTACCGGTACTGAATGCCGGTGATGGCTCCAACCAACATCCGACGCAAACCTTGCTGGACTTATTCACTATTCAGGAAACCCAGGGGCGTCTGGACAATCTCCACGTCGCAATGGTTGGTGACCTGAAATATGGCCGCACCGTTCACTCCCTGACTCAGGCGTTAGCGAAGTTCGACGGCAACCGTTTTTACTTCATCGCGCCGGACGCGCTGGCAATGCCGCAATACATTCTGGATATGCTCGATGAAAAAGGGATCGCATGGAGTCTGCACAGCTCTATTGAAGAAGTGATGGCGGAAGTAGACATCCTGTACATGACCCGCGTGCAAAAAGAGCGTCTGGACCCGTCCGAGTACGCCAACGTGAAAGCGCAGTTTGTTCTTCGCGCCAGCGATCTCCACAACGCCAAAGCCAATATGAAAGTGCTGCATCCGCTGCCGCGTGTTGATGAGATTGCGACGGATGTTGATAAAACGCCACACGCCTGGTACTTCCAGCAGGCAGGCAACGGGATTTTCGCTCGCCAGGCGTTACTGGCACTGGTTCTGAATCGCGATCTGGTACTGTAA", - "dna_sequence_length": 936, - "functions": [ - "aspartate carbamoyltransferase, catalytic subunit" - ], - "id": "CDS_4163", - "location": [ - [ - "NC_000913", - 4472395, - "-", - 936 - ] - ], - "md5": "a99a479d69f34bd87207bb749af56d63", - "parent_gene": "", - "protein_md5": "9d0c600b70c827b4f4c4c35dd66337e1", - "protein_translation": "MANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKVIASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDAIVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLNRDLVL", - "protein_translation_length": 311, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948768" - ], - [ - "gene_synonym", - "ECK4241" - ], - [ - "gene_synonym", - "GI:16132068" - ], - [ - "gene_synonym", - "EcoGene:EG11279" - ], - [ - "gene_synonym", - "NP_418667.1" - ], - [ - "gene_synonym", - "JW4205" - ], - [ - "gene_synonym", - "ASAP:ABE-0013899" - ], - [ - "gene_synonym", - "b4246" - ], - [ - "gene_synonym", - "pyrL" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AD83" - ] - ], - "dna_sequence": "ATGGTTCAGTGTGTTCGACATTTTGTCTTACCGCGTCTGAAAAAAGACGCTGGCCTGCCGTTTTTCTTCCCGTTGATCACCCATTCCCAGCCCCTCAATCGAGGGGCTTTTTTTTGCCCAGGCGTCAGGAGATAA", - "dna_sequence_length": 135, - "functions": [ - "pyrBI operon leader peptide" - ], - "id": "CDS_4164", - "location": [ - [ - "NC_000913", - 4472533, - "-", - 135 - ] - ], - "md5": "8385be0f338914960890eb84f36f5ab2", - "parent_gene": "", - "protein_md5": "3691bc3a112b689e4110d399f97fdaaf", - "protein_translation": "MVQCVRHFVLPRLKKDAGLPFFFPLITHSQPLNRGAFFCPGVRR", - "protein_translation_length": 44, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjgH" - ], - [ - "gene_synonym", - "ASAP:ABE-0013905" - ], - [ - "gene_synonym", - "ECK4242" - ], - [ - "gene_synonym", - "EcoGene:EG12527" - ], - [ - "gene_synonym", - "GeneID:948769" - ], - [ - "gene_synonym", - "b4248" - ], - [ - "gene_synonym", - "JW4206" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39332" - ], - [ - "gene_synonym", - "GI:16132070" - ], - [ - "gene_synonym", - "NP_418669.1" - ] - ], - "dna_sequence": "ATGGTAGAAAGAACCGCTGTTTTCCCTGCTGGCCGACATTCACTATATGCTGAGCATCGTTATTCTGCGGCTATTCGTTCCGGCGATTTGCTGTTTGTTTCCGGGCAAGTAGGAAGTCGAGAGGACGGAACACCAGAACCCGATTTTCAGCAACAAGTCAGACTGGCATTTGATAATTTGCATGCGACCCTGGCAGCTGCGGGATGCACTTTTGACGATATCATTGATGTTACGAGCTTCCATACCGATCCAGAAAACCAATTTGAAGACATCATGACGGTGAAAAATGAAATATTTAGCGCCCCACCTTATCCAAACTGGACGGCGGTGGGTGTTACATGGCTGGCAGGCTTTGATTTTGAAATTAAAGTGATAGCGCGCATCCCTGAGCAGTAA", - "dna_sequence_length": 396, - "functions": [ - "UPF0131 family protein" - ], - "id": "CDS_4165", - "location": [ - [ - "NC_000913", - 4473209, - "-", - 396 - ] - ], - "md5": "c156a97729b1a158fcceafe6b7aef21d", - "parent_gene": "", - "protein_md5": "2bdec6e0c2bd6de2c717398f08792998", - "protein_translation": "MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ", - "protein_translation_length": 131, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjgI" - ], - [ - "gene_synonym", - "EcoGene:EG12528" - ], - [ - "gene_synonym", - "ECK4243" - ], - [ - "gene_synonym", - "bdcA" - ], - [ - "gene_synonym", - "ASAP:ABE-0013909" - ], - [ - "gene_synonym", - "GeneID:948765" - ], - [ - "gene_synonym", - "b4249" - ], - [ - "gene_synonym", - "JW4207" - ], - [ - "gene_synonym", - "NP_418670.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39333" - ], - [ - "gene_synonym", - "GI:16132071" - ] - ], - "dna_sequence": "ATGGGCGCTTTTACAGGTAAGACAGTTCTCATCCTCGGTGGCAGTCGTGGTATCGGTGCCGCTATCGTACGTCGTTTCGTCACCGATGGGGCCAATGTACGATTCACCTATGCGGGGTCGAAAGATGCCGCTAAACGCCTGGCACAAGAGACTGGAGCGACAGCAGTATTCACAGATAGTGCTGACAGAGACGCTGTCATTGATGTCGTTCGTAAGAGCGGCGCATTGGATATCCTGGTGGTAAATGCAGGTATTGGCGTCTTTGGCGAGGCCCTGGAATTAAATGCCGACGATATTGATCGCCTTTTCAAAATCAATATTCATGCTCCTTATCATGCCTCTGTTGAAGCCGCCCGGCAGATGCCCGAAGGCGGGCGCATCTTAATCATCGGCTCCGTGAATGGCGATCGTATGCCTGTTGCAGGCATGGCTGCTTATGCCGCCAGCAAATCTGCCCTGCAAGGCATGGCGCGCGGGCTGGCCCGTGATTTTGGACCGCGTGGGATCACCATTAACGTCGTCCAGCCAGGGCCAATTGATACCGACGCTAATCCCGCCAACGGGCCAATGCGCGATATGTTGCATAGTTTGATGGCTATCAAAAGACATGGGCAACCGGAAGAGGTCGCTGGTATGGTCGCATGGTTAGCAGGGCCAGAAGCCAGTTTTGTTACCGGCGCGATGCATACCATTGATGGCGCGTTTGGCGCATAA", - "dna_sequence_length": 714, - "functions": [ - "c-di-GMP-binding biofilm dispersal mediator protein" - ], - "id": "CDS_4166", - "location": [ - [ - "NC_000913", - 4474053, - "-", - 714 - ] - ], - "md5": "83d9f9fb49f768fcd513f8226d5c60d3", - "parent_gene": "", - "protein_md5": "8fb2e1baeb2e2ef474c7f5e27d88e91b", - "protein_translation": "MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA", - "protein_translation_length": 237, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418672.4" - ], - [ - "gene_synonym", - "EcoGene:EG12529" - ], - [ - "gene_synonym", - "yjgJ" - ], - [ - "gene_synonym", - "ASAP:ABE-0013918" - ], - [ - "gene_synonym", - "ECK4244" - ], - [ - "gene_synonym", - "GeneID:948775" - ], - [ - "gene_synonym", - "GI:90111712" - ], - [ - "gene_synonym", - "JW4208" - ], - [ - "gene_synonym", - "bdcR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39334" - ], - [ - "gene_synonym", - "b4251" - ] - ], - "dna_sequence": "ATGGTCACTAAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATTAACCCCCCGAGCCTCTACGCGGCTTTTGGCAGTAAAGCTGGGTTATTTAGCCGTGTACTCAATGAATACGTCGGTACGGAAGCTATTCCGCTTGCCGATATTCTTCGTGATGATCGTCCGGTAGGCGAGTGCCTGGTTGAGGTATTAAAAGAAGCGGCGCGCAGATATAGCCAAAACGGCGGCTGCGCTGGCTGTATGGTTCTTGAAGGTATTCATAGTCATGATCCACAAGCGCGTGATATTGCCGTTCAATATTATCACGCCGCAGAAACGACCATTTATGACTACATCGCCAGGCGGCATCCACAACGCGCACAATGTGTGACTGATTTTATGAGTACCGTGATGTCTGGGCTTTCTGCGAAGGCACGAGAGGGGCACTCTATAGAACAACTCTGTGCAACAGCTGCAATGGCGGGGGAAGCGATAAAAACTATTCTTGAGGAGTGA", - "dna_sequence_length": 594, - "functions": [ - "transcriptional repressor for divergent bdcA" - ], - "id": "CDS_4167", - "location": [ - [ - "NC_000913", - 4474124, - "+", - 594 - ] - ], - "md5": "09506d0070c696253fb4818e81b93636", - "parent_gene": "", - "protein_md5": "3d49f8d590c20e84f8e85aedf5b38d3f", - "protein_translation": "MVTKKQSRVPGRPRRFAPEQAISAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLVEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQRAQCVTDFMSTVMSGLSAKAREGHSIEQLCATAAMAGEAIKTILEE", - "protein_translation_length": 197, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjgK" - ], - [ - "gene_synonym", - "EcoGene:EG12530" - ], - [ - "gene_synonym", - "GeneID:948777" - ], - [ - "gene_synonym", - "ECK4245" - ], - [ - "gene_synonym", - "GI:90111713" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF96" - ], - [ - "gene_synonym", - "JW5756" - ], - [ - "gene_synonym", - "tabA" - ], - [ - "gene_synonym", - "b4252" - ], - [ - "gene_synonym", - "NP_418673.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0013921" - ] - ], - "dna_sequence": "ATGATCATCGGAAATATTCATAATCTTCAGCCGTGGCTACCCCAGGAGTTACGCCAGGCGATTGAGCATATCAAAGCACACGTTACGGCAGAAACGCCAAAGGGCAAGCACGATATCGAAGGCAATCGACTGTTTTATCTTATCTCGGAAGATATGACCGAGCCGTACGAAGCTCGCCGTGCGGAGTACCATGCCCGCTATCTTGACATTCAGATTGTGTTAAAAGGTCAGGAAGGCATGACCTTCAGCACGCAACCTGCAGGCGCGCCGGATACCGACTGGTTAGCTGATAAAGACATCGCATTTTTGCCGGAAGGCGTTGATGAGAAAACAGTTATTCTAAATGAAGGTGATTTTGTTGTGTTTTATCCGGGGGAAGTGCATAAACCGCTGTGCGCAGTGGGCGCGCCAGCCCAGGTTCGCAAAGCAGTAGTGAAGATGCTGATGGCGTGA", - "dna_sequence_length": 453, - "functions": [ - "biofilm modulator regulated by toxins", - "DUF386 family protein, cupin superfamily protein" - ], - "id": "CDS_4168", - "location": [ - [ - "NC_000913", - 4474862, - "+", - 453 - ] - ], - "md5": "67822e21a9e65ff869cb8ad86ffc0c02", - "parent_gene": "", - "protein_md5": "8e18647357463a0449b1373d616a32b7", - "protein_translation": "MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGAPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA", - "protein_translation_length": 150, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjgL" - ], - [ - "gene_synonym", - "EcoGene:EG12531" - ], - [ - "gene_synonym", - "GeneID:948776" - ], - [ - "gene_synonym", - "JW5757" - ], - [ - "gene_synonym", - "ECK4246" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39336" - ], - [ - "gene_synonym", - "NP_418674.2" - ], - [ - "gene_synonym", - "GI:90111714" - ], - [ - "gene_synonym", - "ASAP:ABE-0013925" - ], - [ - "gene_synonym", - "b4253" - ] - ], - "dna_sequence": "ATGAGCAAAATATCAGATTTAAATTATTCTCAACACATTACATTAGCCGACAATTTTAAACAAAAAAGTGAAGTTTTAAATACCTGGCGTGTTGGAATGAATGATTTTGCCCGTATTGCCGGGGGGCAGGATAACAGAAGGAATATTCTTTCTCCTGGAGCATTTTTAGAGTTTTTGGCAAAGATATTTACCCTGGGTTATGTGGATTTTAGCAAACGCTCCAACGAAGCGGGTAGAAATATGATGGCTCATATTAAGTCCTCATCTTATTCTAAAGATACTAATGGCAATGAAAAAATGAAGTTTTACATGAATAATCCTGTAGGGGAACGAGCGGATTCACCCAAGGTGATTATAGAAATTTCACTTTCCACTATCACTACTATGGGGACTCGTCAAGGACATACAGCCATTATATTTCCACAACCTGATGGTTCGACTAACCGTTATGAAGGGAAGTCCTTTGAAAGAAAAGATGAGAGTTCATTACACCTGATTACTAACAAGGTTCTGGCGTGTTACCAAAGTGAAGCTAACAAGAAAATAGCGCGTCTATTAAATAATAATCAGGAGTTAAATAATCTACAGAAATTAAATAATCTACAGAAGTTAAATAATCTACTGAAGTTAAATAATATACAGGGGTTAAATAATCCTCAGGAGTTAAATAATCCGCAGAATTTAAATGATTCTCAGGAGTTAAATAACTCGCAGGAATTAAATAGTCCACAGGAGTTAAATGATCCGCAGGAGTTAAATAATTCTCAGGACTTAAATAACTCTAAGGTGAGTTGTACAGTTTCAGTTGATTCTACGATTACGGGTTTATTAAAAGAACCATTGAATAATGCATTATTAGCAATAAGGAACGAACATCTGCTATTAATGCCTCATGTATGTGATGAATCGATTTCATACTTACTGGGCGAAAAAGGTATACTTGAAGAAATAGATAAGCTCTACGCATTAAATGATCACGGAATTGATAATGACAAAGTAGGTAACAATGAAATTAATGACATCAAAGTTAACCTGTCTCATATTCTTATTGATTCCTTAGATGATGCAAAGGTTAACCTTACACCGGTCATCGATTCGATTCTGGAGACTTTTTCAAAATCCCCATATATTAATGATGTAAGAATACTGGATTGGTGTTTTAATAAAAGCATGCAATATTTTGATGATACTAAAAAGATAAAGCATGCATGCTCCGTAATAAATCATATTAATCTTCGCAGCGATCAGTCTAAAATAGCTGAGACATTATTTTTCAATCTCGATAAAGAACCCTATAAAAATAGCCCTGAATTACAGGGGTTGATTTGGAATAAGTTGGTTGTATATGTCAATGAATTTAACTTAAGTAATCGAGAAAAAACAAATTTAATACAAAGGCTATTTGATAATGTTGAGTCTATATTTAATGAAGTACCTGTCAGCATTTTAGTGAATGATATTTTTATGAATGATTTCTTTATGAAAAATCCTGAGATGATTAATTGGTACTTCCCTCAGTTACTTAAGAGTTATGAGGGTGAAAAGATTTATTTTGATAATTTAAAATATGATTTAAATGATAATGATAAGGAATCTAATAAAGAAATTTTGAAGAATCAACCAGATAATGTTATCAAAGAAAAACTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAA", - "dna_sequence_length": 1815, - "functions": [ - "SopA-central-domain-like hexapeptide repeat protein" - ], - "id": "CDS_4169", - "location": [ - [ - "NC_000913", - 4475437, - "+", - 1815 - ] - ], - "md5": "a2cbac4a98bd70a0c416faf30881dcb1", - "parent_gene": "", - "protein_md5": "3acf9a02305d661c4b0ed457e46fb939", - "protein_translation": "MSKISDLNYSQHITLADNFKQKSEVLNTWRVGMNDFARIAGGQDNRRNILSPGAFLEFLAKIFTLGYVDFSKRSNEAGRNMMAHIKSSSYSKDTNGNEKMKFYMNNPVGERADSPKVIIEISLSTITTMGTRQGHTAIIFPQPDGSTNRYEGKSFERKDESSLHLITNKVLACYQSEANKKIARLLNNNQELNNLQKLNNLQKLNNLLKLNNIQGLNNPQELNNPQNLNDSQELNNSQELNSPQELNDPQELNNSQDLNNSKVSCTVSVDSTITGLLKEPLNNALLAIRNEHLLLMPHVCDESISYLLGEKGILEEIDKLYALNDHGIDNDKVGNNEINDIKVNLSHILIDSLDDAKVNLTPVIDSILETFSKSPYINDVRILDWCFNKSMQYFDDTKKIKHACSVINHINLRSDQSKIAETLFFNLDKEPYKNSPELQGLIWNKLVVYVNEFNLSNREKTNLIQRLFDNVESIFNEVPVSILVNDIFMNDFFMKNPEMINWYFPQLLKSYEGEKIYFDNLKYDLNDNDKESNKEILKNQPDNVIKEKLNNEYKLRFRMMQTILQSRVNVLPYINEQRLNKLNPPENLRIAIEHFGWKNRPITA", - "protein_translation_length": 604, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4247" - ], - [ - "gene_synonym", - "GeneID:948774" - ], - [ - "gene_synonym", - "argI" - ], - [ - "gene_synonym", - "JW4211" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P04391" - ], - [ - "gene_synonym", - "NP_418675.1" - ], - [ - "gene_synonym", - "EcoGene:EG10069" - ], - [ - "gene_synonym", - "ASAP:ABE-0013927" - ], - [ - "gene_synonym", - "b4254" - ], - [ - "gene_synonym", - "GI:16132076" - ] - ], - "dna_sequence": "ATGTCCGGGTTTTATCATAAGCATTTCCTGAAATTACTCGATTTCACGCCAGCTGAACTCAACAGCCTGCTGCAGTTAGCCGCGAAGCTGAAAGCCGATAAGAAAAGCGGTAAAGAAGAAGCCAAACTCACTGGTAAAAACATCGCGCTCATCTTCGAAAAAGACTCGACTCGTACCCGATGCTCTTTCGAAGTTGCCGCATATGACCAGGGTGCTCGCGTTACTTATCTCGGCCCAAGCGGCAGCCAGATTGGTCATAAAGAGTCGATTAAAGACACTGCCCGCGTGCTTGGTCGCATGTATGACGGTATTCAGTATCGCGGCTATGGTCAGGAGATTGTCGAAACACTGGCGGAATACGCTAGCGTGCCGGTATGGAATGGCCTGACCAATGAGTTCCATCCCACGCAGCTGCTGGCGGATCTTCTCACCATGCAGGAGCATTTGCCCGGCAAAGCGTTCAACGAAATGACGCTGGTCTATGCAGGTGACGCGCGTAACAACATGGGCAATTCGATGCTCGAAGCTGCGGCGCTTACCGGTCTGGATTTGCGTCTGGTCGCGCCACAAGCGTGCTGGCCGGAAGCTGCGCTGGTTACGGAATGCCGCGCCCTGGCACAGCAAAATGGTGGGAATATTACGCTGACTGAAGATGTCGCGAAGGGAGTTGAAGGTGCTGACTTTATCTATACCGATGTGTGGGTGTCGATGGGGGAAGCAAAAGAGAAATGGGCGGAACGGATTGCATTGCTGCGTGAATATCAGGTGAACAGCAAGATGATGCAGTTGACCGGTAACCCGGAGGTCAAATTCCTCCACTGCCTGCCCGCGTTTCATGACGACCAAACGACGCTTGGCAAGAAAATGGCGGAAGAATTTGGCCTACATGGCGGTATGGAAGTCACTGATGAGGTCTTCGAATCTGCCGCCAGCATTGTTTTTGATCAGGCGGAAAACCGTATGCATACTATCAAAGCGGTGATGGTCGCGACGCTCAGTAAATAA", - "dna_sequence_length": 1005, - "functions": [ - "ornithine carbamoyltransferase 1" - ], - "id": "CDS_4170", - "location": [ - [ - "NC_000913", - 4478311, - "-", - 1005 - ] - ], - "md5": "f9a9af7a7f97386c333c920d674785c2", - "parent_gene": "", - "protein_md5": "8e061b03736136d32fd4f4485c8e72dc", - "protein_translation": "MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK", - "protein_translation_length": 334, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rraB" - ], - [ - "gene_synonym", - "ECK4248" - ], - [ - "gene_synonym", - "NP_418676.1" - ], - [ - "gene_synonym", - "GeneID:948773" - ], - [ - "gene_synonym", - "yjgD" - ], - [ - "gene_synonym", - "JW4212" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF90" - ], - [ - "gene_synonym", - "ASAP:ABE-0013936" - ], - [ - "gene_synonym", - "b4255" - ], - [ - "gene_synonym", - "GI:16132077" - ], - [ - "gene_synonym", - "EcoGene:EG12453" - ] - ], - "dna_sequence": "ATGGCAAACCCGGAACAACTGGAAGAACAGCGTGAAGAAACACGTTTGATTATTGAAGAATTACTGGAAGATGGCAGCGATCCGGACGCGCTGTACACCATCGAACACCATCTTTCCGCAGACGATCTGGAAACCCTGGAAAAAGCAGCAGTTGAAGCGTTTAAACTCGGTTACGAAGTGACCGATCCAGAAGAGCTGGAAGTTGAAGATGGTGATATCGTGATTTGCTGCGACATCCTCAGCGAGTGCGCGTTGAATGCCGATCTGATCGATGCCCAGGTTGAACAACTGATGACGCTGGCAGAGAAATTTGACGTTGAGTACGACGGATGGGGCACTTACTTTGAAGATCCTAACGGCGAAGATGGCGACGATGAAGATTTTGTCGATGAAGACGATGACGGAGTTCGCCACTAA", - "dna_sequence_length": 417, - "functions": [ - "protein inhibitor of RNase E" - ], - "id": "CDS_4171", - "location": [ - [ - "NC_000913", - 4478473, - "+", - 417 - ] - ], - "md5": "91e39baa29a9bda69c5049cfc0991c59", - "parent_gene": "", - "protein_md5": "c1ce4550f2fd26228902b5e45090e656", - "protein_translation": "MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH", - "protein_translation_length": 138, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4249" - ], - [ - "gene_synonym", - "EcoGene:EG12532" - ], - [ - "gene_synonym", - "yjgM" - ], - [ - "gene_synonym", - "YP_026287.1" - ], - [ - "gene_synonym", - "GeneID:948772" - ], - [ - "gene_synonym", - "GI:49176479" - ], - [ - "gene_synonym", - "JW5758" - ], - [ - "gene_synonym", - "ASAP:ABE-0013939" - ], - [ - "gene_synonym", - "b4256" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39337" - ] - ], - "dna_sequence": "ATGAATAACATTGCGCCGCAATCACCTGTAATGCGTCGCCTGACGCTGCAGGATAATCCTGCTATCGCCCGCGTCATTCGTCAGGTATCCGCCGAATACGGTCTTACCGCTGATAAAGGCTACACCGTCGCCGATCCGAATCTTGACGAGCTGTATCAAGTATATAGTCAGCCTGGCCATGCATATTGGGTCGTTGAGTACGAGGGTGAAGTGGTCGGCGGCGGTGGGATAGCGCCATTAACCGGGAGTGAGTCGGATATTTGCGAACTGCAAAAGATGTATTTTCTTCCGGCTATCCGCGGCAAAGGGCTGGCAAAAAAACTGGCCTTAATGGCGATGGAGCAGGCGCGAGAGATGGGTTTCAAACGCTGCTATCTGGAAACGACCGCTTTTTTAAAGGAAGCCATTGCGCTTTATGAGCATTTGGGCTTTGAGCATATCGACTATGCGCTTGGCTGCACGGGCCATGTCGATTGTGAAGTGCGGATGTTGCGCGAACTCTAA", - "dna_sequence_length": 504, - "functions": [ - "GNAT family putative N-acetyltransferase" - ], - "id": "CDS_4172", - "location": [ - [ - "NC_000913", - 4479537, - "-", - 504 - ] - ], - "md5": "94546f60105250123f483fecca42f58a", - "parent_gene": "", - "protein_md5": "83d579ef1486845a388edbf2bebce479", - "protein_translation": "MNNIAPQSPVMRRLTLQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLREL", - "protein_translation_length": 167, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12533" - ], - [ - "gene_synonym", - "yjgN" - ], - [ - "gene_synonym", - "YP_026288.1" - ], - [ - "gene_synonym", - "ECK4250" - ], - [ - "gene_synonym", - "GI:49176480" - ], - [ - "gene_synonym", - "GeneID:948784" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39338" - ], - [ - "gene_synonym", - "JW5759" - ], - [ - "gene_synonym", - "b4257" - ], - [ - "gene_synonym", - "ASAP:ABE-0013944" - ] - ], - "dna_sequence": "ATGGCTCAAGTTATTAATGAAATGGATGTTCCGTCCCATTCGTTTGTTTTTCATGGTACAGGTGAGAGATATTTTCTTATTTGTGTGGTGAATGTGTTGTTAACGATTATAACGCTAGGTATCTATTTACCATGGGCATTAATGAAATGTAAGCGTTATCTTTATGCTAATATGGAAGTTAACGGACAACGATTTTCTTATGGAATTACCGGTGGGAATGTTTTTGTTAGTTGTCTTTTTTTTGTTTTTTTCTATTTCGCAATCTTAATGACAGTGTCAGCAGATATGCCGCTTGTTGGTTGTGTTTTGACTTTGTTACTGTTGGTTTTGCTTATATTTATGGCAGCAAAAGGACTGCGTCATCAGGCCTTAATGACCAGTCTCAACGGCGTAAGATTTAGTTTTAATTGCTCTATGAAAGGGTTCTGGTGGGTGACCTTTTTCTTGCCGATTTTAATGGCCATTGGGATGGGGACTGTTTTCTTTATCTCGACAAAGATGCTACCTGCCAATAGTTCAAGTAGTGTTATTATATCCATGGTTCTGATGGCAATAGTTGGTATTGTTTCCATTGGTATTTTTAATGGTACTTTATATAGTCTGGTAATGAGTTTTCTCTGGAGTAATACCAGTTTCGGTATACATCGTTTCAAGGTGAAATTAGATACTACGTATTGTATAAAATATGCCATTCTCGCATTTTTAGCTTTATTGCCTTTTCTCGCTGTTGCTGGTTATATTATCTTCGATCAAATATTAAATGCGTATGATAGTTCTGTATATGCAAATGATGACATTGAGAATTTACAGCAATTTATGGAAATGCAACGTAAAATGATAATCGCGCAGTTAATCTATTATTTTGGGATTGCTGTTAGCACAAGTTATTTAACGGTGTCTTTGCGAAACCATTTTATGAGCAACCTGTCACTGAATGATGGGCGTATTCGTTTTCGCTTAACTTTAACGTACCACGGTATGCTTTATCGCATGTGTGCGTTGGTGGTGATATCCGGGATTACGGGCGGTCTGGCTTATCCACTGCTGAAAATATGGATGATTGACTGGCAGGCAAAAAATACGTATTTGCTGGGCGATTTGGATGACCTTCCTTTAATCAATAAAGAAGAACAACCAGATAAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAA", - "dna_sequence_length": 1197, - "functions": [ - "DUF898 family inner membrane protein" - ], - "id": "CDS_4173", - "location": [ - [ - "NC_000913", - 4479730, - "+", - 1197 - ] - ], - "md5": "ac3539526c9dec7799ad2b95cc3578f4", - "parent_gene": "", - "protein_md5": "eeb381ed949b8e04d4b4393f6cb20b45", - "protein_translation": "MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLFFVFFYFAILMTVSADMPLVGCVLTLLLLVLLIFMAAKGLRHQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAIGMGTVFFISTKMLPANSSSSVIISMVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRLTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLASISRGVMPSLPFL", - "protein_translation_length": 398, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418679.1" - ], - [ - "gene_synonym", - "GI:16132080" - ], - [ - "gene_synonym", - "ECK4251" - ], - [ - "gene_synonym", - "GeneID:948785" - ], - [ - "gene_synonym", - "val-act" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P07118" - ], - [ - "gene_synonym", - "b4258" - ], - [ - "gene_synonym", - "JW4215" - ], - [ - "gene_synonym", - "valS" - ], - [ - "gene_synonym", - "EcoGene:EG11067" - ], - [ - "gene_synonym", - "ASAP:ABE-0013946" - ] - ], - "dna_sequence": "ATGGAAAAGACATATAACCCACAAGATATCGAACAGCCGCTTTACGAGCACTGGGAAAAGCAGGGCTACTTTAAGCCTAATGGCGATGAAAGCCAGGAAAGTTTCTGCATCATGATCCCGCCGCCGAACGTCACCGGCAGTTTGCATATGGGTCACGCCTTCCAGCAAACCATCATGGATACCATGATCCGCTATCAGCGCATGCAGGGCAAAAACACCCTGTGGCAGGTCGGTACTGACCACGCCGGGATCGCTACCCAGATGGTCGTTGAGCGCAAGATTGCCGCAGAAGAAGGTAAAACCCGTCACGACTACGGCCGCGAAGCTTTCATCGACAAAATCTGGGAATGGAAAGCGGAATCTGGCGGCACCATTACCCGTCAGATGCGCCGTCTCGGCAACTCCGTCGACTGGGAGCGTGAACGCTTCACCATGGACGAAGGCCTGTCCAATGCGGTGAAAGAAGTTTTCGTTCGTCTGTATAAAGAAGACCTGATTTACCGTGGCAAACGCCTGGTAAACTGGGATCCGAAACTGCGCACCGCTATCTCTGACCTGGAAGTCGAAAACCGCGAATCGAAAGGTTCGATGTGGCACATCCGCTATCCGCTGGCTGACGGTGCGAAAACCGCAGACGGTAAAGATTATCTGGTGGTCGCGACTACCCGTCCAGAAACCCTGCTGGGCGATACTGGCGTAGCCGTTAACCCGGAAGATCCGCGTTACAAAGATCTGATTGGCAAATATGTCATTCTGCCGCTGGTTAACCGTCGTATTCCGATCGTTGGCGACGAACACGCCGACATGGAAAAAGGCACCGGCTGCGTGAAAATCACTCCGGCGCACGACTTTAACGACTATGAAGTGGGTAAACGTCACGCCCTGCCGATGATCAACATCCTGACCTTTGACGGCGATATCCGTGAAAGCGCCCAGGTGTTCGATACCAAAGGTAACGAATCTGACGTTTATTCCAGCGAAATCCCTGCAGAGTTCCAGAAACTGGAGCGTTTTGCTGCACGTAAAGCAGTCGTTGCCGCAGTTGACGCGCTTGGCCTGCTGGAAGAAATTAAACCGCACGACCTGACCGTTCCTTACGGCGACCGTGGCGGCGTAGTTATCGAACCAATGCTGACCGACCAGTGGTACGTGCGTGCCGATGTCCTGGCGAAACCGGCGGTTGAAGCGGTTGAGAACGGCGACATTCAGTTCGTACCGAAGCAGTACGAAAACATGTACTTCTCCTGGATGCGCGATATTCAGGACTGGTGTATCTCTCGTCAGTTGTGGTGGGGTCACCGTATCCCGGCATGGTATGACGAAGCGGGTAACGTTTATGTTGGCCGCAACGAAGACGAAGTGCGTAAAGAAAATAACCTCGGTGCTGATGTTGTCCTGCGTCAGGACGAAGACGTTCTCGATACCTGGTTCTCTTCTGCGCTGTGGACCTTCTCTACCCTTGGCTGGCCGGAAAATACCGACGCCCTGCGTCAGTTCCACCCAACCAGCGTGATGGTATCTGGTTTCGACATCATTTTCTTCTGGATTGCCCGCATGATCATGATGACCATGCACTTCATCAAAGATGAAAATGGCAAACCGCAGGTGCCGTTCCACACCGTTTACATGACCGGCCTGATTCGTGATGACGAAGGCCAGAAGATGTCCAAATCCAAGGGTAACGTTATCGACCCACTGGATATGGTTGACGGTATTTCGCTGCCAGAACTGCTGGAAAAACGTACCGGCAATATGATGCAGCCGCAGCTGGCGGACAAAATCCGTAAGCGCACCGAGAAGCAGTTCCCGAACGGTATTGAGCCGCACGGTACTGACGCGCTGCGCTTCACCCTGGCGGCGCTGGCGTCTACCGGTCGTGACATCAACTGGGATATGAAGCGTCTGGAAGGTTACCGTAACTTCTGTAACAAGCTGTGGAACGCCAGCCGCTTTGTGCTGATGAACACAGAAGGTCAGGATTGCGGCTTCAACGGCGGCGAAATGACGCTGTCGCTGGCGGACCGCTGGATTCTGGCGGAGTTCAACCAGACCATCAAAGCGTACCGCGAAGCGCTGGACAGCTTCCGCTTCGATATCGCCGCAGGCATTCTGTATGAGTTCACCTGGAACCAGTTCTGTGACTGGTATCTCGAGCTGACCAAGCCGGTAATGAACGGTGGCACCGAAGCAGAACTGCGCGGTACTCGCCATACGCTGGTGACTGTACTGGAAGGTCTGCTGCGCCTCGCGCATCCGATCATTCCGTTCATCACCGAAACCATCTGGCAGCGTGTGAAAGTACTTTGCGGTATCACTGCCGACACCATCATGCTGCAGCCGTTCCCGCAGTACGATGCATCTCAGGTTGATGAAGCCGCACTGGCCGACACCGAATGGCTGAAACAGGCGATCGTTGCGGTACGTAACATCCGTGCAGAAATGAACATCGCGCCGGGCAAACCGCTGGAGCTGCTGCTGCGTGGTTGCAGCGCGGATGCAGAACGTCGCGTAAATGAAAACCGTGGCTTCCTGCAAACCCTGGCGCGTCTGGAAAGTATCACCGTGCTGCCTGCCGATGACAAAGGTCCGGTTTCCGTTACGAAGATCATCGACGGTGCAGAGCTGCTGATCCCGATGGCTGGCCTCATCAACAAAGAAGATGAGCTGGCGCGTCTGGCGAAAGAAGTGGCGAAGATTGAAGGTGAAATCAGCCGTATCGAGAACAAACTGGCGAACGAAGGCTTTGTCGCCCGCGCACCGGAAGCGGTCATCGCGAAAGAGCGTGAGAAGCTGGAAGGCTATGCGGAAGCGAAAGCGAAACTGATTGAACAGCAGGCTGTTATCGCCGCGCTGTAA", - "dna_sequence_length": 2856, - "functions": [ - "valyl-tRNA synthetase" - ], - "id": "CDS_4174", - "location": [ - [ - "NC_000913", - 4483837, - "-", - 2856 - ] - ], - "md5": "b69dae1285d5b10be47faca863f7fce9", - "parent_gene": "", - "protein_md5": "49d56ab928bea53c521c5ab492835eaf", - "protein_translation": "MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVVLRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL", - "protein_translation_length": 951, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418680.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28905" - ], - [ - "gene_synonym", - "b4259" - ], - [ - "gene_synonym", - "GeneID:948787" - ], - [ - "gene_synonym", - "ECK4252" - ], - [ - "gene_synonym", - "ASAP:ABE-0013948" - ], - [ - "gene_synonym", - "JW4216" - ], - [ - "gene_synonym", - "GI:16132081" - ], - [ - "gene_synonym", - "holC" - ], - [ - "gene_synonym", - "EcoGene:EG11413" - ] - ], - "dna_sequence": "ATGAAAAACGCGACGTTCTACCTTCTGGACAATGACACCACCGTCGATGGCTTAAGCGCCGTTGAGCAACTGGTGTGTGAAATTGCCGCAGAACGTTGGCGCAGCGGTAAGCGCGTGCTCATCGCCTGTGAAGATGAAAAGCAGGCTTACCGGCTGGATGAAGCCCTGTGGGCGCGTCCGGCAGAAAGCTTTGTTCCGCATAATTTAGCGGGAGAAGGACCGCGCGGCGGTGCACCGGTGGAGATCGCCTGGCCGCAAAAGCGTAGCAGCAGCCGGCGCGATATATTGATTAGTCTGCGAACAAGCTTTGCAGATTTTGCCACCGCTTTCACAGAAGTGGTAGACTTCGTTCCTTATGAAGATTCTCTGAAACAACTGGCGCGCGAACGCTATAAAGCCTACCGCGTGGCTGGTTTCAACCTGAATACGGCAACCTGGAAATAA", - "dna_sequence_length": 444, - "functions": [ - "DNA polymerase III, chi subunit" - ], - "id": "CDS_4175", - "location": [ - [ - "NC_000913", - 4484280, - "-", - 444 - ] - ], - "md5": "a8088a80a043dbef8079fa07bf01a0c0", - "parent_gene": "", - "protein_md5": "73e440d3b37bece233f6f8c9b7987fe1", - "protein_translation": "MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK", - "protein_translation_length": 147, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948791" - ], - [ - "gene_synonym", - "pepA" - ], - [ - "gene_synonym", - "carP" - ], - [ - "gene_synonym", - "EcoGene:EG10694" - ], - [ - "gene_synonym", - "ECK4253" - ], - [ - "gene_synonym", - "NP_418681.1" - ], - [ - "gene_synonym", - "GI:16132082" - ], - [ - "gene_synonym", - "JW4217" - ], - [ - "gene_synonym", - "xerB" - ], - [ - "gene_synonym", - "b4260" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P68767" - ], - [ - "gene_synonym", - "ASAP:ABE-0013953" - ] - ], - "dna_sequence": "ATGGAGTTTAGTGTAAAAAGCGGTAGCCCGGAGAAACAGCGGAGTGCCTGCATCGTCGTGGGCGTCTTCGAACCACGTCGCCTTTCTCCGATTGCAGAACAGCTCGATAAAATCAGCGATGGGTACATCAGCGCCCTGCTACGTCGGGGCGAACTGGAAGGAAAACCGGGGCAGACATTGTTGCTGCACCATGTTCCGAATGTACTTTCCGAGCGAATTCTCCTTATTGGTTGCGGCAAAGAACGTGAGCTGGATGAGCGTCAGTACAAGCAGGTTATTCAGAAAACCATTAATACGCTGAATGATACTGGCTCAATGGAAGCGGTCTGCTTTCTGACTGAGCTGCACGTTAAAGGCCGTAACAACTACTGGAAAGTGCGTCAGGCTGTCGAGACGGCAAAAGAGACGCTCTACAGTTTCGATCAGCTGAAAACGAACAAGAGCGAACCGCGTCGTCCGCTGCGTAAGATGGTGTTCAACGTGCCGACCCGCCGTGAACTGACCAGCGGTGAGCGCGCGATCCAGCACGGTCTGGCGATTGCCGCCGGGATTAAAGCAGCAAAAGATCTCGGCAATATGCCGCCGAATATCTGTAACGCCGCTTACCTCGCTTCACAAGCGCGCCAGCTGGCTGACAGCTACAGCAAGAATGTCATCACCCGCGTTATCGGCGAACAGCAGATGAAAGAGCTGGGGATGCATTCCTATCTGGCGGTCGGTCAGGGTTCGCAAAACGAATCGCTGATGTCGGTGATTGAGTACAAAGGCAACGCGTCGGAAGATGCACGCCCAATCGTGCTGGTGGGTAAAGGTTTAACCTTCGACTCCGGCGGTATCTCGATCAAGCCTTCAGAAGGCATGGATGAGATGAAGTACGATATGTGCGGTGCGGCAGCGGTTTACGGCGTGATGCGGATGGTCGCGGAGCTACAACTGCCGATTAACGTTATCGGCGTGTTGGCAGGCTGCGAAAACATGCCTGGCGGACGAGCCTATCGTCCGGGCGATGTGTTAACCACCATGTCCGGTCAAACCGTTGAAGTGCTGAACACCGACGCTGAAGGCCGCCTGGTACTGTGCGACGTGTTAACTTACGTTGAGCGTTTTGAGCCGGAAGCGGTGATTGACGTGGCGACGCTGACCGGTGCCTGCGTGATCGCGCTGGGTCATCATATTACTGGTCTGATGGCGAACCATAATCCGCTGGCCCATGAACTGATTGCCGCGTCTGAACAATCCGGTGACCGCGCATGGCGCTTACCGCTGGGTGACGAGTATCAGGAACAACTGGAGTCCAATTTTGCCGATATGGCGAACATTGGCGGTCGTCCTGGTGGGGCGATTACCGCAGGTTGCTTCCTGTCACGCTTTACCCGTAAGTACAACTGGGCGCACCTGGATATCGCCGGTACCGCCTGGCGTTCTGGTAAAGCAAAAGGCGCCACCGGTCGTCCGGTAGCGTTGCTGGCACAGTTCCTGTTAAACCGCGCTGGGTTTAACGGCGAAGAGTAA", - "dna_sequence_length": 1512, - "functions": [ - "multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site-specific recombination factor" - ], - "id": "CDS_4176", - "location": [ - [ - "NC_000913", - 4485951, - "-", - 1512 - ] - ], - "md5": "ce99850e7d06a51d9cfa5ae21ff8174a", - "parent_gene": "", - "protein_md5": "265d817054fc93eac46c9c4d888ed0e2", - "protein_translation": "MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE", - "protein_translation_length": 503, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948795" - ], - [ - "gene_synonym", - "b4261" - ], - [ - "gene_synonym", - "EcoGene:EG12535" - ], - [ - "gene_synonym", - "ECK4254" - ], - [ - "gene_synonym", - "NP_418682.1" - ], - [ - "gene_synonym", - "GI:16132083" - ], - [ - "gene_synonym", - "yjgP" - ], - [ - "gene_synonym", - "JW4218" - ], - [ - "gene_synonym", - "lptF" - ], - [ - "gene_synonym", - "ASAP:ABE-0013958" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AF98" - ] - ], - "dna_sequence": "GTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGAAATGGCGCAGCTTATCCTGCCATTAAGCCTGTTCCTCGGGCTGCTGATGACGCTGGGCAAACTGTATACCGAAAGTGAAATTACGGTAATGCATGCCTGCGGCCTGAGCAAAGCGGTTCTGGTGAAAGCGGCAATGATCCTTGCGGTATTCACGGCAATCGTAGCGGCGGTTAACGTGATGTGGGCGGGACCGTGGTCATCGCGTCATCAGGATGAAGTGTTAGCAGAAGCGAAAGCGAACCCTGGCATGGCGGCGCTGGCGCAAGGGCAATTCCAGCAAGCGACTAATGGCAGCTCGGTGCTGTTCATCGAAAGCGTTGACGGCAGCGATTTCAAAGATGTGTTCCTCGCGCAAATTCGACCAAAAGGTAATGCACGTCCTTCTGTGGTGGTGGCCGATTCCGGACATTTAACCCAGCTGCGCGACGGCTCCCAGGTCGTCACTCTCAACCAGGGAACGCGCTTCGAAGGCACTGCATTGTTACGTGATTTCCGCATTACGGACTTCCAGGATTATCAGGCGATCATTGGTCACCAGGCGGTGGCGCTCGACCCGAACGATACCGACCAGATGGACATGCGCACATTGTGGAACACTGACACCGATCGTGCTCGCGCAGAACTGAACTGGCGTATCACGTTGGTATTCACCGTGTTTATGATGGCACTTATGGTCGTACCGCTGAGCGTGGTTAACCCACGTCAGGGACGCGTACTGTCGATGCTGCCAGCCATGCTGCTGTATCTACTTTTCTTCCTGATCCAGACCTCCCTGAAATCGAACGGCGGTAAAGGTAAGCTGGACCCGACGCTGTGGATGTGGACCGTTAACCTGATTTATCTGGCTTTAGCGATTGTTCTCAACCTTTGGGACACCGTGCCGGTCCGCCGCCTGCGCGCCAGTTTTTCGCGTAAAGGAGCGGTGTGA", - "dna_sequence_length": 1101, - "functions": [ - "lipopolysaccharide export ABC permease" - ], - "id": "CDS_4177", - "location": [ - [ - "NC_000913", - 4486218, - "+", - 1101 - ] - ], - "md5": "a2ae530d95a606e8232730004825cdb1", - "parent_gene": "", - "protein_md5": "f4ff6dc96b1878923d1425f335eb7815", - "protein_translation": "MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV", - "protein_translation_length": 366, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12536" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADC6" - ], - [ - "gene_synonym", - "GeneID:945324" - ], - [ - "gene_synonym", - "ECK4255" - ], - [ - "gene_synonym", - "ASAP:ABE-0013960" - ], - [ - "gene_synonym", - "JW5760" - ], - [ - "gene_synonym", - "GI:90111715" - ], - [ - "gene_synonym", - "yjgQ" - ], - [ - "gene_synonym", - "NP_418683.4" - ], - [ - "gene_synonym", - "b4262" - ], - [ - "gene_synonym", - "lptG" - ] - ], - "dna_sequence": "ATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGCCGGGCAGGGGAGTTACGACGCGTTAGGCGCAGGAATGTATACCTTGCTGAGCGTGCCGAAAGATGTGCAGATCTTCTTCCCGATGGCGGCTCTGCTTGGGGCGTTGCTTGGTCTTGGGATGCTGGCGCAGCGCAGCGAACTGGTGGTGATGCAGGCTTCTGGTTTTACCCGTATGCAGGTGGCGCTGTCGGTGATGAAAACCGCCATTCCGCTGGTCTTGCTGACGATGGCGATTGGCGAATGGGTCGCGCCGCAGGGCGAGCAGATGGCGCGTAACTACCGTGCGCAGGCGATGTACGGCGGCTCGTTGCTCTCTACCCAGCAAGGCTTATGGGCGAAAGATGGCAACAACTTCGTCTACATTGAGCGGGTTAAAGGTGACGAAGAGTTAGGTGGCATCAGCATTTATGCCTTTAACGAGAATCGTCGTCTGCAATCCGTACGCTATGCCGCTACTGCGAAGTTTGACCCGGAACATAAAGTCTGGCGTCTGTCGCAGGTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCGGACGTTATCAGCTCAACATGTGGAGCAAAATCTTCCAGCCGCTATCTGTGGCGGTGATGATGCTGATGGCGCTGTCGTTCATCTTTGGCCCACTGCGTAGCGTACCGATGGGCGTGCGTGTGGTCACCGGTATCAGTTTCGGTTTTGTCTTCTACGTACTGGACCAGATCTTCGGCCCGCTGACGTTGGTTTATGGCATCCCGCCGATCATCGGCGCACTGTTGCCAAGCGCCAGCTTCTTCTTAATCAGCCTGTGGCTGTTAATGAGAAAATCGTAA", - "dna_sequence_length": 1083, - "functions": [ - "lipopolysaccharide export ABC permease" - ], - "id": "CDS_4178", - "location": [ - [ - "NC_000913", - 4487318, - "+", - 1083 - ] - ], - "md5": "99fd011f7d42841d764d30ae13625d33", - "parent_gene": "", - "protein_md5": "ebd46305b825ee934c2340d3d0707d31", - "protein_translation": "MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS", - "protein_translation_length": 360, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12537" - ], - [ - "gene_synonym", - "GeneID:948978" - ], - [ - "gene_synonym", - "ECK4256" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39342" - ], - [ - "gene_synonym", - "NP_418684.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0013963" - ], - [ - "gene_synonym", - "GI:16132085" - ], - [ - "gene_synonym", - "b4263" - ], - [ - "gene_synonym", - "yjgR" - ], - [ - "gene_synonym", - "JW4220" - ] - ], - "dna_sequence": "ATGAGTGAACCCCTGTTAATTGCCCGCACGCCGGACACAGAACTGTTTTTACTGCCGGGAATGGCTAACCGTCATGGGCTGATTACCGGCGCAACGGGGACGGGTAAAACCGTTACGCTGCAAAAACTGGCGGAGTCATTGTCGGAAATCGGCGTGCCGGTGTTTATGGCTGATGTGAAAGGCGATCTGACCGGCGTCGCGCAGGCAGGAACGGTGTCGGAAAAACTGCTCGCAAGGCTTAAAAATATCGGCGTCAATGACTGGCAACCGCATGCCAATCCGGTGGTGGTGTGGGATATCTTTGGCGAGAAAGGCCATCCGGTGCGGGCGACGGTTTCGGATCTGGGGCCGCTGTTGCTGGCACGACTGTTGAATCTCAACGATGTGCAATCTGGCGTGCTGAATATCATCTTCCGCATTGCTGACGATCAGGGGCTGTTACTGCTCGACTTTAAAGATCTGCGGGCAATTACCCAGTACATCGGCGATAACGCCAAATCCTTCCAGAATCAGTACGGTAATATCAGTAGCGCATCGGTTGGTGCCATCCAGCGCGGGCTGTTGTCGCTGGAACAGCAAGGCGCAGCACACTTCTTTGGTGAGCCGATGCTGGATATCAAAGACTGGATGCGCACCGATGCCAACGGTAAAGGCGTTATCAATATCCTCAGCGCCGAGAAACTTTATCAGATGCCGAAACTGTACGCCGCCAGCCTGCTGTGGATGCTTTCAGAGTTGTATGAACAATTGCCGGAAGCGGGCGATCTGGAGAAACCAAAACTGGTGTTTTTCTTCGACGAGGCACATCTGCTGTTTAACGATGCCCCGCAGGTACTGCTGGATAAGATTGAGCAGGTGATAAGGCTTATTCGCTCAAAAGGCGTGGGCGTCTGGTTCGTTTCGCAAAACCCGTCTGATATTCCGGATAATGTGCTCGGGCAGCTCGGTAATCGCGTTCAACATGCTTTGCGGGCTTTTACGCCAAAAGATCAGAAAGCAGTGAAGGCAGCGGCGCAAACCATGCGGGCCAATCCGGCGTTTGATACCGAAAAGGCGATTCAGGAACTGGGCACCGGCGAGGCGTTGATCTCTTTTCTGGATGCGAAAGGAAGCCCTTCTGTGGTGGAGCGTGCGATGGTGATCGCGCCTTGTTCGCGGATGGGGCCGGTGACGGAAGATGAGCGTAATGGCTTGATTAATCACTCTCCGGTGTATGGCAAATATGAGGATGAGGTGGACCGGGAATCCGCCTATGAGATGTTGCAAAAAGGCTTTCAGGCCAGTACCGAGCAGCAAAATAATCCTCCCGCGAAAGGGAAAGAGGTAGCGGTGGATGACGGCATTCTTGGTGGATTGAAGGATATTTTGTTCGGCACTACCGGACCACGCGGCGGGAAGAAAGATGGTGTGGTGCAAACAATGGCCAAAAGCGCCGCTCGCCAAGTGACGAATCAGATTGTACGCGGGATGTTGGGGAGTTTGCTGGGGGGGAGAAGAAGGTAA", - "dna_sequence_length": 1503, - "functions": [ - "DUF853 family protein with NTPase fold" - ], - "id": "CDS_4179", - "location": [ - [ - "NC_000913", - 4490063, - "-", - 1503 - ] - ], - "md5": "adf27d90df6522327637b7c4a3520842", - "parent_gene": "", - "protein_md5": "5a1860d65fe4b0e401f478dec2d95bca", - "protein_translation": "MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGVAQAGTVSEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDEVDRESAYEMLQKGFQASTEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR", - "protein_translation_length": 500, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:949058" - ], - [ - "gene_synonym", - "gntH" - ], - [ - "gene_synonym", - "ECK4257" - ], - [ - "gene_synonym", - "NP_418685.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39343" - ], - [ - "gene_synonym", - "gntS?" - ], - [ - "gene_synonym", - "idnR" - ], - [ - "gene_synonym", - "GI:16132086" - ], - [ - "gene_synonym", - "ASAP:ABE-0013966" - ], - [ - "gene_synonym", - "JW4221" - ], - [ - "gene_synonym", - "yjgS" - ], - [ - "gene_synonym", - "EcoGene:EG12538" - ], - [ - "gene_synonym", - "b4264" - ] - ], - "dna_sequence": "ATGCGCAATCACAGAATTTCTTTACAGGATATCGCTACGCTGGCTGGCGTAACAAAAATGACCGTGAGTCGTTATATCCGCTCGCCGAAAAAGGTGGCAAAGGAAACAGGCGAGCGCATCGCCAAAATTATGGAAGAGATCAATTATATCCCTAATCGCGCTCCCGGCATGTTGTTGAATGCACAAAGTTATACCCTCGGTATCTTGATTCCGTCATTTCAAAATCAACTCTTCGCTGACATTCTCGCGGGAATAGAATCCGTCACCTCTGAGCATAATTATCAGACCCTTATTGCTAATTACAATTACGATCGCGATTCCGAAGAAGAGTCGGTGATTAACCTGCTCTCTTATAACATTGACGGGATTATACTTTCGGAAAAATATCACACCATCAGGACGGTGAAATTTCTGCGTTCAGCCACCATTCCGGTCGTGGAATTGATGGATGTACAGGGAGAACGGCTGGATATGGAGGTCGGTTTTGATAATCGGCAGGCCGCTTTTGACATGGTGTGTACCATGCTGGAGAAGCGAGTCAGGCACAAAATTCTGTATCTCGGTTCCAAAGATGACACCCGCGATGAACAGCGTTATCAGGGGTATTGCGATGCGATGATGCTGCATAATCTTTCCCCATTACGCATGAATCCACGCGCCATCTCATCCATTCATTTAGGAATGCAGTTAATGCGTGATGCCCTTAGCGCAAACCCGGATTTAGACGGTGTATTTTGCACCAATGACGATATTGCGATGGGTGCGCTTCTGCTGTGCCGCGAGCGAAACCTCGCCGTGCCAGAACAAATTTCCATTGCGGGTTTTCATGGGCTGGAGATTGGCAGGCAAATGATCCCAAGCCTCGCCAGCGTAATTACTCCCCGTTTTGATATTGGTCGGATGGCCGCCCAAATGTTGCTGAGCAAAATTAAAAATAACGATCACAACCACAACACTGTTGACCTCGGGTATCAGATTTATCACGGCAACACGCTTTAG", - "dna_sequence_length": 999, - "functions": [ - "transcriptional repressor, 5-gluconate-binding" - ], - "id": "CDS_4180", - "location": [ - [ - "NC_000913", - 4491139, - "-", - 999 - ] - ], - "md5": "e584f3f787eb947133186e307b3e612a", - "parent_gene": "", - "protein_md5": "75a2facc22cbb3aaaff061320cf7a8a6", - "protein_translation": "MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLNAQSYTLGILIPSFQNQLFADILAGIESVTSEHNYQTLIANYNYDRDSEEESVINLLSYNIDGIILSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLEKRVRHKILYLGSKDDTRDEQRYQGYCDAMMLHNLSPLRMNPRAISSIHLGMQLMRDALSANPDLDGVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGRMAAQMLLSKIKNNDHNHNTVDLGYQIYHGNTL", - "protein_translation_length": 332, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4258" - ], - [ - "gene_synonym", - "gntW" - ], - [ - "gene_synonym", - "idnT" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39344" - ], - [ - "gene_synonym", - "GeneID:948798" - ], - [ - "gene_synonym", - "EcoGene:EG12539" - ], - [ - "gene_synonym", - "GI:16132087" - ], - [ - "gene_synonym", - "JW4222" - ], - [ - "gene_synonym", - "ASAP:ABE-0013969" - ], - [ - "gene_synonym", - "NP_418686.1" - ], - [ - "gene_synonym", - "yjgT" - ], - [ - "gene_synonym", - "b4265" - ] - ], - "dna_sequence": "ATGCCATTAATCATTATTGCGGCAGGCGTCGCGCTGCTTCTTATCCTGATGATCGGCTTTAAAGTTAACGGCTTTATTGCCCTCGTTCTGGTAGCTGCCGTCGTCGGATTTGCCGAAGGGATGGATGCACAGGCCGTCCTGCACTCTATACAAAATGGTATCGGCAGCACGCTCGGCGGGCTGGCAATGATCCTCGGTTTCGGGGCCATGTTAGGCAAGCTGATTTCTGATACGGGTGCGGCACAACGTATCGCCACTACGCTGATTGCTACTTTTGGTAAAAAACGCGTGCAATGGGCGCTAGTGATCACCGGTCTGGTTGTGGGCCTCGCCATGTTTTTTGAAGTGGGTTTTGTCCTGCTGTTGCCGTTGGTATTTACCATCGTAGCATCATCAGGATTACCCCTGTTGTATGTTGGCGTACCAATGGTAGCAGCGCTCTCTGTAACCCACTGTTTTCTGCCGCCACATCCAGGGCCTACTGCCATCGCGACTATCTTTGAGGCTAATCTCGGAACGACTTTACTGTATGGATTTATCATTACCATTCCGACAGTTATTGTCGCAGGACCGCTGTTTTCTAAACTGCTAACTCGCTTTGAGAAAGCACCACCGGAAGGCTTATTTAATCCTCATCTGTTTAGCGAAGAGGAGATGCCCTCCTTCTGGAACAGTATTTTCGCTGCCGTGATCCCGGTCATCCTGATGGCTATCGCCGCCGTTTGTGAAATTACGTTACCGAAAACTAACACCGTGCGCCTCTTCTTTGAATTTGTCGGTAACCCTGCCGTTGCGCTGTTTATTGCCATTGTTATTGCGATTTTCACACTGGGCCGACGTAATGGACGCACCATCGAGCAAATCATGGATATCATTGGGGATTCTATAGGCGCTATCGCGATGATTGTGTTTATTATCGCTGGCGGCGGCGCGTTTAAGCAGGTATTAGTAGATAGCGGTGTCGGGCACTATATTTCACACTTAATGACCGGAACTACACTTTCGCCGTTATTGATGTGCTGGACTGTTGCGGCGCTGTTGCGTATCGCTCTGGGCTCTGCCACCGTCGCGGCCATTACCACCGCGGGTGTGGTGTTGCCGATTATCAACGTTACCCATGCCGATCCCGCTTTAATGGTACTGGCAACCGGTGCGGGCAGCGTGATCGCGTCACACGTAAACGACCCTGGCTTCTGGCTATTTAAAGGGTATTTTAATCTGACGGTTGGTGAAACGTTGCGTACCTGGACGGTGATGGAAACCCTTATTTCTATTATGGGTTTGCTGGGCGTGTTAGCCATTAACGCCGTATTGCACTGA", - "dna_sequence_length": 1320, - "functions": [ - "L-idonate and D-gluconate transporter" - ], - "id": "CDS_4181", - "location": [ - [ - "NC_000913", - 4492525, - "-", - 1320 - ] - ], - "md5": "811abfc5fd3961fca658034ef8d9e7d8", - "parent_gene": "", - "protein_md5": "a29555aebeedc02f8e439afdb844e21e", - "protein_translation": "MPLIIIAAGVALLLILMIGFKVNGFIALVLVAAVVGFAEGMDAQAVLHSIQNGIGSTLGGLAMILGFGAMLGKLISDTGAAQRIATTLIATFGKKRVQWALVITGLVVGLAMFFEVGFVLLLPLVFTIVASSGLPLLYVGVPMVAALSVTHCFLPPHPGPTAIATIFEANLGTTLLYGFIITIPTVIVAGPLFSKLLTRFEKAPPEGLFNPHLFSEEEMPSFWNSIFAAVIPVILMAIAAVCEITLPKTNTVRLFFEFVGNPAVALFIAIVIAIFTLGRRNGRTIEQIMDIIGDSIGAIAMIVFIIAGGGAFKQVLVDSGVGHYISHLMTGTTLSPLLMCWTVAALLRIALGSATVAAITTAGVVLPIINVTHADPALMVLATGAGSVIASHVNDPGFWLFKGYFNLTVGETLRTWTVMETLISIMGLLGVLAINAVLH", - "protein_translation_length": 439, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9P9" - ], - [ - "gene_synonym", - "EcoGene:EG12540" - ], - [ - "gene_synonym", - "ECK4259" - ], - [ - "gene_synonym", - "GeneID:947109" - ], - [ - "gene_synonym", - "yjgU" - ], - [ - "gene_synonym", - "ASAP:ABE-0013971" - ], - [ - "gene_synonym", - "idnO" - ], - [ - "gene_synonym", - "JW4223" - ], - [ - "gene_synonym", - "NP_418687.1" - ], - [ - "gene_synonym", - "b4266" - ], - [ - "gene_synonym", - "GI:16132088" - ] - ], - "dna_sequence": "ATGAACGATCTATTTTCACTGGCAGGAAAAAATATCTTGATTACCGGTTCAGCACAGGGCATTGGCTTTTTACTGGCAACCGGCCTGGGTAAATATGGCGCACAAATAATTATTAATGATATTACTGCCGAACGCGCAGAACTTGCTGTAGAAAAACTCCACCAGGAGGGTATTCAGGCCGTTGCCGCACCTTTTAATGTTACTCATAAACATGAAATTGATGCCGCCGTTGAACATATCGAAAAGGACATCGGCCCCATTGATGTGCTGGTGAATAACGCCGGTATCCAGCGCCGTCATCCTTTTACTGAGTTCCCTGAACAAGAGTGGAATGATGTGATCGCAGTAAACCAGACCGCCGTGTTCCTGGTATCGCAAGCGGTAACTCGTCACATGGTTGAACGCAAGGCAGGTAAAGTTATTAATATTTGCTCGATGCAAAGCGAACTGGGACGTGACACCATCACCCCTTATGCCGCATCGAAAGGGGCGGTAAAAATGCTCACCCGCGGCATGTGCGTCGAGCTGGCGCGCCACAATATTCAGGTCAACGGTATTGCGCCGGGCTATTTCAAAACAGAAATGACTAAAGCACTGGTTGAGGACGAAGCCTTCACCGCCTGGTTGTGCAAACGGACCCCCGCCGCACGCTGGGGAGATCCGCAGGAACTGATTGGTGCTGCGGTGTTCCTTTCTTCAAAAGCCTCTGATTTCGTAAACGGCCACCTGTTGTTTGTTGATGGCGGCATGTTAGTGGCTGTTTAA", - "dna_sequence_length": 765, - "functions": [ - "5-keto-D-gluconate-5-reductase" - ], - "id": "CDS_4182", - "location": [ - [ - "NC_000913", - 4493351, - "-", - 765 - ] - ], - "md5": "1669a1d58d3aad57481739af5829c68e", - "parent_gene": "", - "protein_md5": "9c88867cbc70ead29b8ecfa72389d5d4", - "protein_translation": "MNDLFSLAGKNILITGSAQGIGFLLATGLGKYGAQIIINDITAERAELAVEKLHQEGIQAVAAPFNVTHKHEIDAAVEHIEKDIGPIDVLVNNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVTRHMVERKAGKVINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGMLVAV", - "protein_translation_length": 254, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4260" - ], - [ - "gene_synonym", - "EcoGene:EG12541" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39346" - ], - [ - "gene_synonym", - "NP_418688.1" - ], - [ - "gene_synonym", - "GeneID:944769" - ], - [ - "gene_synonym", - "ASAP:ABE-0013975" - ], - [ - "gene_synonym", - "idnD" - ], - [ - "gene_synonym", - "GI:16132089" - ], - [ - "gene_synonym", - "b4267" - ], - [ - "gene_synonym", - "yjgV" - ], - [ - "gene_synonym", - "JW4224" - ] - ], - "dna_sequence": "ATGCAAGTGAAAACACAGTCCTGCGTTGTTGCGGGCAAGAAAACTGTTGCCGTTACCGAGCAGACGATAGATTGGAATAATAATGGAACATTAGTACAAATAACCCGAGGTGGAATTTGCGGTTCCGATTTACATTATTATCAGGAAGGAAAAGTAGGTAATTTCATGATAAAGGCACCGATGGTGTTAGGTCATGAAGTTATCGGTAAAGTTATTCATAGCGACTCATCAGAATTACATGAAGGGCAAACGGTAGCCATTAATCCGTCTAAACCGTGCGGTCACTGCAAATACTGCATTGAACATAACGAGAATCAGTGTACAGATATGCGTTTTTTTGGCAGTGCCATGTATTTCCCTCATGTTGATGGTGGTTTTACCCGTTATAAAATGGTCGAAACGTCGCAATGTGTCCCTTATCCGGCCAAAGCTGACGAAAAGGTTATGGCTTTTGCCGAACCTTTAGCCGTCGCGATTCATGCCGCACATCAGGCCGGCGAGTTACAGGGCAAGCGAGTATTTATTTCCGGTGTTGGACCCATTGGCTGCCTGATTGTCAGTGCAGTGAAAACACTGGGGGCCGCGGAAATTGTCTGTGCTGATGTGAGTCCCCGTTCCCTTTCGCTGGGCAAAGAGATGGGGGCGGATGTGCTCGTAAACCCACAAAACGACGACATGGATCACTGGAAAGCGGAAAAAGGCTATTTCGATGTCAGCTTTGAAGTGTCCGGTCATCCTTCATCAGTGAATACCTGTCTGGAGGTCACTCGTGCACGCGGCGTAATGGTGCAGGTAGGTATGGGAGGCGCGATGGCAGAATTCCCAATGATGACGTTGATTGGTAAGGAGATTTCACTCAGAGGCTCTTTCCGTTTTACCAGCGAATTTAATACCGCAGTGTCATGGCTGGCGAATGGCGTTATCAATCCACTGCCTTTACTGAGTGCTGAATATCCCTTCACTGACCTGGAAGAGGCGCTACGTTTCGCCGGTGATAAAACCCAGGCAGCAAAAGTCCAGCTTGTTTTCTAA", - "dna_sequence_length": 1032, - "functions": [ - "L-idonate 5-dehydrogenase, NAD-binding" - ], - "id": "CDS_4183", - "location": [ - [ - "NC_000913", - 4494406, - "-", - 1032 - ] - ], - "md5": "9fb09ba92abb50c858f5947f025ed8c3", - "parent_gene": "", - "protein_md5": "5fc767598f5b606964011ac95f917ab1", - "protein_translation": "MQVKTQSCVVAGKKTVAVTEQTIDWNNNGTLVQITRGGICGSDLHYYQEGKVGNFMIKAPMVLGHEVIGKVIHSDSSELHEGQTVAINPSKPCGHCKYCIEHNENQCTDMRFFGSAMYFPHVDGGFTRYKMVETSQCVPYPAKADEKVMAFAEPLAVAIHAAHQAGELQGKRVFISGVGPIGCLIVSAVKTLGAAEIVCADVSPRSLSLGKEMGADVLVNPQNDDMDHWKAEKGYFDVSFEVSGHPSSVNTCLEVTRARGVMVQVGMGGAMAEFPMMTLIGKEISLRGSFRFTSEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALRFAGDKTQAAKVQLVF", - "protein_translation_length": 343, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4261" - ], - [ - "gene_synonym", - "EcoGene:EG12152" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39208" - ], - [ - "gene_synonym", - "ASAP:ABE-0013980" - ], - [ - "gene_synonym", - "GI:16132090" - ], - [ - "gene_synonym", - "GeneID:946066" - ], - [ - "gene_synonym", - "b4268" - ], - [ - "gene_synonym", - "idnK" - ], - [ - "gene_synonym", - "NP_418689.1" - ], - [ - "gene_synonym", - "gntV" - ], - [ - "gene_synonym", - "JW4225" - ] - ], - "dna_sequence": "ATGGCGGGTGAAAGCTTTATTTTGATGGGCGTTTCAGGGAGTGGTAAAACATTAATTGGTAGCAAGGTTGCCGCGTTATTATCTGCTAAATTTATTGATGGTGACGATCTTCATCCAGCCAAAAATATAGATAAAATGTCGCAGGGTATTCCATTATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATGCAGCGTCGGGCTGGGCATTTTATGCCGGTAGCGTTACTAAAAAGTCAGTTTGAGGCACTGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGACAAAACAGAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGA", - "dna_sequence_length": 564, - "functions": [ - "D-gluconate kinase, thermosensitive" - ], - "id": "CDS_4184", - "location": [ - [ - "NC_000913", - 4494623, - "+", - 564 - ] - ], - "md5": "fca417a483ae123877c643b40937fa1b", - "parent_gene": "", - "protein_md5": "8bef7645bff59027078b8dcd71c3ac20", - "protein_translation": "MAGESFILMGVSGSGKTLIGSKVAALLSAKFIDGDDLHPAKNIDKMSQGIPLSDEDRLPWLERLNDASYSLYKKNETGFIVCSSLKKQYRDILRKGSPHVHFLWLDGDYETILARMQRRAGHFMPVALLKSQFEALERPQADEQDIVRIDINHDIANVTEQCRQAVLAIRQNRICAKEGSASDQRCE", - "protein_translation_length": 187, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4262" - ], - [ - "gene_synonym", - "GeneID:948802" - ], - [ - "gene_synonym", - "EcoGene:EG11436" - ], - [ - "gene_synonym", - "yjgB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27250" - ], - [ - "gene_synonym", - "ahr" - ], - [ - "gene_synonym", - "b4269" - ], - [ - "gene_synonym", - "JW5761" - ], - [ - "gene_synonym", - "GI:90111716" - ], - [ - "gene_synonym", - "NP_418690.4" - ], - [ - "gene_synonym", - "ASAP:ABE-0013982" - ] - ], - "dna_sequence": "ATGTCGATGATAAAAAGCTATGCCGCAAAAGAAGCGGGCGGCGAACTGGAAGTTTATGAGTACGATCCCGGTGAGCTGAGGCCACAAGATGTTGAAGTGCAGGTGGATTACTGCGGGATCTGCCATTCCGATCTGTCGATGATCGATAACGAATGGGGATTTTCACAATATCCGCTGGTTGCCGGGCATGAGGTGATTGGGCGCGTGGTGGCACTCGGGAGCGCCGCGCAGGATAAAGGTTTGCAGGTCGGTCAGCGTGTCGGGATTGGCTGGACGGCGCGTAGCTGTGGTCACTGCGACGCCTGTATTAGCGGTAATCAGATCAACTGCGAGCAAGGTGCGGTGCCGACGATTATGAATCGCGGTGGCTTTGCCGAGAAGTTGCGTGCGGACTGGCAATGGGTGATTCCACTGCCAGAAAATATTGATATCGAGTCCGCCGGGCCGCTGTTGTGCGGCGGTATCACGGTCTTTAAACCACTGTTGATGCACCATATCACTGCTACCAGCCGCGTTGGGGTAATTGGTATTGGCGGGCTGGGGCATATCGCTATAAAACTTCTGCACGCAATGGGATGCGAGGTGACAGCCTTTAGTTCTAATCCGGCGAAAGAGCAGGAAGTGCTGGCGATGGGTGCCGATAAAGTGGTGAATAGCCGCGATCCGCAGGCACTGAAAGCACTGGCGGGGCAGTTTGATCTCATTATCAACACCGTCAACGTCAGCCTCGACTGGCAGCCCTATTTTGAGGCGCTGACCTATGGCGGTAATTTCCATACGGTCGGTGCGGTTCTCACGCCGCTGTCTGTTCCGGCCTTTACGTTAATTGCGGGCGATCGCAGCGTCTCTGGTTCTGCTACCGGCACGCCTTATGAGCTGCGTAAGCTGATGCGTTTTGCCGCCCGCAGCAAGGTTGCGCCGACCACCGAACTGTTCCCGATGTCGAAAATTAACGACGCCATCCAGCATGTGCGCGACGGTAAGGCGCGTTACCGCGTGGTGTTGAAAGCCGATTTTTGA", - "dna_sequence_length": 1020, - "functions": [ - "broad specificity NADPH-dependent aldehyde reductase, Zn-containing" - ], - "id": "CDS_4185", - "location": [ - [ - "NC_000913", - 4496209, - "-", - 1020 - ] - ], - "md5": "a63e4f9d357a0519e835943d279b386f", - "parent_gene": "", - "protein_md5": "a5e34328e12e34256dd07428af49849e", - "protein_translation": "MSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF", - "protein_translation_length": 339, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4264" - ], - [ - "gene_synonym", - "b4271" - ], - [ - "gene_synonym", - "intB" - ], - [ - "gene_synonym", - "int" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39347" - ], - [ - "gene_synonym", - "yjgC" - ], - [ - "gene_synonym", - "GeneID:948782" - ], - [ - "gene_synonym", - "EcoGene:EG12364" - ], - [ - "gene_synonym", - "ASAP:ABE-0013992" - ], - [ - "gene_synonym", - "JW4227" - ] - ], - "dna_sequence": "ATGGCATTAACAGATATCAAAGTCAGAGCAGCCAAGCCAACGGATAAGCAATATTAGCTGACTGATGGTGGCGGTATGCATCTGCTTGTCCATCCAAATGGTTCTAAGTACTGGCGTTTGCAGTACCGTTATGAGGGAAAGCAAAAAATGCTGGCACTTGGGGTTTATCCTGAAATCACACTAGCGGATGCCAGAGTACGTCGTGACGAGGCGCGTAAGCTGCTTGCGAATGGCGTCGATCCGGGAGACAAAAAGAAAAATGATAAGGTTGAACAGAGTAAAGCACGAACCTTTAAAGAAGTCGCGATTGAGTGGCATGGCACCAATAAAAAGTGGTCTGAAGATCACGCCCATCGTGTGCTAAAAAGTCTTGAAGATAATCTTTTTGCAGCGCTTGGTGAACGTAATATCGCTGAGTTAAAAACTCGAGATTTATTAGCACCTATTAAGGCCGTAGAAATGTCTGGACGTCTTGAAGTGGCCGCTCGTCTTCAGCAGCGCACTACAGCCATCATGCGCTATGCAGTGCAAAGTGGGTTAATTGATTATAACCCGGCACAAGAGATGGCTGGGGCGGTTGCTTCCTGTAATCGACAACATCGTCCCGCGCTTGAATTAAAGCGCATCCCTGAGTTGCTTACAAAAATAGATAGCTATACTGGTAGGCCGCTAACCCGATGGGCGATAGAACTCACTTTGCTGATCTTTATTCGGTCCAGTGAGCTGCGTTTTGCTCGTTGGTCAGAGATCGATTTCGAAGCGTCTATATGGACTATCCCACCGGAGCGGGAGCCTATTCCTGGAGTGAAACATTCCCATAGAGGCTCAAAAATGCGTACAACGCATCTAGTGCCTCTTTCAACGCAAGCTCTTGCAATTTTAAAGCAGATAAAACAGTTTTATGGGGCCCATGACTTGATATTTATTGGTGATCACGATTCGCACAAACCCATGAGTGAGAATACGGTAAATAGTGCGTTACGGGTCATGGGGTATGATACAAAAGTAGAGGTTTGTGGTCATGGCTTTCGAACAATGGCCTGTAGTTCATTGGTCGAATCAGGTCTGTGGTCTCGTGATGCTGTTGAACGTCAGATGAGCCACATGGCGCGAAATTCAGTGAGGGCCGCGTATATCCATAAAGCAGAGCATCTGGAAGAACGGCGATTGATGCTACAGTGGTGGGCCGATTTTCTGGATGTAAACAGAGAAAGGTTTATCAGTCCATTTGAATATGCAAAGATTAATAATCCATTAAAACAGTAA", 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"ATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAA", - "dna_sequence_length": 366, - "functions": [ - "IS2 repressor TnpA" - ], - "id": "CDS_4187", - "location": [ - [ - "NC_000913", - 4498272, - "+", - 366 - ] - ], - "md5": "9ed51bec276857ffa1620cbb329c920f", - "parent_gene": "", - "protein_md5": "2766fdd4e9e285df2a70f8c10f901f65", - "protein_translation": "MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRAKKWIAHAPLLPGDGE", - "protein_translation_length": 121, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948779" - ], - [ - "gene_synonym", - "b4273" - ], - [ - "gene_synonym", - "EcoGene:EG40004" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF58" - ], - [ - "gene_synonym", - "NP_418693.1" - ], - [ - "gene_synonym", - "ECK0358" - ], - [ - "gene_synonym", - "GI:16132094" - ], - [ - "gene_synonym", - "ASAP:ABE-0014001" - ], - [ - "gene_synonym", - "insD1" - ] - ], - "dna_sequence": "GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAG", - "dna_sequence_length": 906, - "functions": [ - "IS2 transposase TnpB" - ], - "id": "CDS_4188", - "location": [ - [ - "NC_000913", - 4498595, - "+", - 906 - ] - ], - "md5": "d7a869f3d04f69c9bbc5e3da4131ca74", - "parent_gene": "", - "protein_md5": "e9d0a5629c6cb4141f55451e6130cec7", - "protein_translation": "MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI", - "protein_translation_length": 301, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4274" - ], - [ - "gene_synonym", - "ASAP:ABE-0014009" - ], - [ - "gene_synonym", - "ASAP:ABE-0285108" - ], - [ - "gene_synonym", - "GeneID:4056033" - ], - [ - "gene_synonym", - "ECK4266" - ], - [ - "gene_synonym", - "yjgY" - ], - [ - "gene_synonym", - "ASAP:ABE-0285081" - ], - [ - "gene_synonym", - "b4575" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39349" - ], - [ - "gene_synonym", - "EcoGene:EG12543" - ], - [ - "gene_synonym", - "yjgX" - ], - [ - "gene_synonym", - "JW5764" - ], - [ - "gene_synonym", - "JW5763" - ], - [ - "gene_synonym", - "JW4234" - ], - [ - "gene_synonym", - "ASAP:ABE-0014007" - ], - [ - "gene_synonym", - "yjgW" - ] - ], - "dna_sequence": "GTGAACCGCCCCGTGTTTCCTGTTTATCATTTTCTGGTCAGTGCCGCGATTCTGGTATTCGTGGTGATTTTCTGGCGGACACACCATCGCGACCACCGTAACTGGCTGGCTCTACGGCTATTCGTATTATGCTCTGTAAACCGTTGGCCATTGCGGATGGTTAAAGGAACAGTTGTGGGGACAACTGACACATTACGTGAAATGCAGCGTTATGAACAACTGAGTAGCACGGGGCTGACAACTGGAAAATCCAGCCGGGGAGCACCGTTATATGATACGATTGTTATTGTCACTGGTGAGAGTGTGCGCAGGGATTATATGTCAGTGTATGACTATCCCGTACCAACCACACCGTGGCTGAATACGGCACCCGGTTTATTTATTGACGATTATACCTCGACAGCCTCCAGTACAGTGTCTTCCCTGAGCCGGACACTGATTTATGACTATGAGCAGAACCCTGATTCCGGCAACAATGTGGTGGCGCTGGCAGCAAAAGCAGGATACAGCACATGGTGGATATCCAATCAAGGAAAACTGGGGGAGCATGACACACGCATCTCTGTTATTGCTTCTGATGCGGAGCATGCCACTTTCCTCAAGAAAGGCAGCTTCGCTTCCCGTAAAACAGATGACAAACTGTTGTTACAGGAAACAGAACGTGCGCTGGCGGATACATCCTCTCCGAAGATAATTTTCCTGCACATGATGGGTTCTCATCCAAATCCGTGTGACAGCCTTAACTCCTAGCCGAATAATTACCTGGAGCAGTATCCCCGAAAAATTGCCTGTTACCTCGCCAGCATCAGTAAACTGGATAACTTTCTTGGCCAGCTTGATGGTATCCTTCGCCGGTACTCACGTCATTTCGCCATGCTTTACTTTTCTGGCCTTGGGCTGTCGGTCAGCGACAGTGCCAATCCTGTTCATCATTATGGTCATGTGCAGGGAGGCTACAGTGTGCCACTGATTATTACCGCCAGTGACATAACGTCTCATCAGCCCGTCAGTAGAAAAATCAGTGCCCGTCATTTCGCAGGTATTTTTCAGTGGATGACCGGTATTTGTACTGAAAATATACCGCCATTCAATCCGCTGACAGACGAAGATAACTAACCTGTTATGGTTTTTAAGGGAGAGAGGAATATACCGGCAGACAGTTTGAAACCTCAGCCACTTATTCTTCCTGATCACAGGTAA", 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"gene_synonym", - "JW4236" - ], - [ - "gene_synonym", - "ASAP:ABE-0014018" - ] - ], - "dna_sequence": "TTGTTACCTCCTGGACCGCTTCTTGTCCTTCCAGTCGGAGCGAGAGTTAGCCGGGGCGGACTTTCACCGACGGAAAGATCGTGCATTTCAAGGCACACACAACAATATCTGCGAGCGTGCTATCCGTCCGGTCGTTATGGGACGAAAGGCCTGGTTGTTCGCTGGTTCACTGGTGGCCGGGAACCGCGCGGCACAGATAATGAGCCTTCTGGGAACCGCAGTCTGGAGCCACATGCTTGGCTGACGGACGTCCTGACGCGTCTGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAA", - "dna_sequence_length": 330, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_4190", - "location": [ - [ - "NC_000913", - 4501260, - "+", - 330 - ] - ], - "md5": "7cc1d8dad54a027caae1b09ec9ef55e0", - "parent_gene": "", - "protein_md5": "7e684458f3fdf197432229d4dfbbdb59", - "protein_translation": "MLPPGPLLVLPVGARVSRGGLSPTERSCISRHTQQYLRACYPSGRYGTKGLVVRWFTGGREPRGTDNEPSGNRSLEPHAWLTDVLTRLPEWPEERLAELLPLEGFTFFG", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418698.1" - ], - [ - "gene_synonym", - "GeneID:948805" - ], - [ - "gene_synonym", - "insG" - ], - [ - "gene_synonym", - "ECK4268" - ], - [ - "gene_synonym", - "EcoGene:EG40007" - ], - [ - "gene_synonym", - "b4278" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P03835" - ], - [ - "gene_synonym", - "ASAP:ABE-0014021" - ], - [ - "gene_synonym", - "GI:16132099" - ] - ], - "dna_sequence": "ATGCACATTGGACAGGCTCTTGATCTGGTATCCCGTTACGATTCTCTGCGTAACCCACTGACTTCTCTGGGGGATTACCTCGACCCCGAACTCATCTCTCGTTGCCTTGCCGAATCAGGTACTGTAACGCTACGCAAGCGCCGTCTTCCCCTCGAAATGATGGTCTGGTGTATTGTTGGCATGGCGCTTGAGCGTAAAGAACCTCTTCACCAGATTGTGAATCGCCTGGACATCATGCTGCCGGGCAATCGCCCCTTCGTTGCCCCCAGTGCCGTTATTCAGGCCCGCCAGCGCCTGGGAAGTGAGGCTGTCCGCCGCGTGTTCACGAAAACAGCGCAGCTCTGGCATAACGCCACGCCGCATCCGCACTGGTGCGGCCTGACCCTGCTGGCCATCGATGGTGTGTTCTGGCGCACACCGGATACACCAGAGAACGATGCAGCCTTCCCCCGCCAGACACATGCCGGGAACCCGGCGCTCTACCCGCAGGTCAAAATGGTCTGCCAGATGGAACTGACCAGCCATCTGCTGACGGCTGCAGCCTTCGGCACGATGAAGAACAGCGAAAATGAGCTTGCTGAGCAACTTATAGAACAAACCGGCGATAACACTCTGACGTTAATGGATAAAGGTTATTACTCACTGGGACTGTTAAATGCCTGGAGCCTGGCGGGAGAACACCGCCACTGGATGATACCTCTCAGAAAGGGAGCGCAATATGAAGAGATCAGAAAACTGGGTAAAGGCGATCATCTGGTGAAGCTGAAAACCAGCCCGCAGGCACGAAAAAAGTGGCCGGGACTGGGAAATGAAGTGACTGCCCGCCTGCTGACCGTGACGCGCAAAGGAAAAGTCTGCCATCTGCTGACGTCGATGACGGACGCCATGCGCTTCCCCGGAGGAGAAATGGGGGATCTGTACAGTCATCGCTGGGAAATCGAACTGGGATACAGGGAGATAAAACAGACGATGCAACGGAGCAGGCTGACGCTGAGAAGTAAAAAGCCGGAGCTTGTGGAGCAAGAGCTGTGGGGTGTCTTACTGGCTTATAATCTGGTGAGATATCAGATGATTAAAATGGCGGAACATCTGAAAGGTTACTGGCCGAATCAACTGAGTTTCTCAGAATCATGCGGAATGGTGATGAGAATGCTGATGACATTGCAGGGCGCTTCACCGGGACGTATACCGGAGCTGATGCGCGATCTTGCAAGTATGGGACAACTTGTGAAATTACCGACAAGAAGGGAAAGGGCCTTCCCGAGAGTGGTAAAGGAGAGGCCCTGGAAATACCCCACAGCCCCGAAAAAGAGCCAGTCAGTTGCTTAA", - "dna_sequence_length": 1329, - "functions": [ - "IS4 transposase" - ], - "id": "CDS_4191", - "location": [ - [ - "NC_000913", - 4503431, - "-", - 1329 - ] - ], - "md5": "7b66166e33554309cb59cfc4f3349856", - "parent_gene": "", - "protein_md5": "d25df419c68619bab3e27ac9208e2212", - "protein_translation": "MHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAESGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQARQRLGSEAVRRVFTKTAQLWHNATPHPHWCGLTLLAIDGVFWRTPDTPENDAAFPRQTHAGNPALYPQVKMVCQMELTSHLLTAAAFGTMKNSENELAEQLIEQTGDNTLTLMDKGYYSLGLLNAWSLAGEHRHWMIPLRKGAQYEEIRKLGKGDHLVKLKTSPQARKKWPGLGNEVTARLLTVTRKGKVCHLLTSMTDAMRFPGGEMGDLYSHRWEIELGYREIKQTMQRSRLTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVMRMLMTLQGASPGRIPELMRDLASMGQLVKLPTRRERAFPRVVKERPWKYPTAPKKSQSVA", - "protein_translation_length": 442, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418699.4" - ], - [ - "gene_synonym", - "GeneID:948807" - ], - [ - "gene_synonym", - "yjhB" - ], - [ - "gene_synonym", - "ECK4269" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39352" - ], - [ - "gene_synonym", - "b4279" - ], - [ - "gene_synonym", - "ASAP:ABE-0014025" - ], - [ - "gene_synonym", - "GI:90111718" - ], - [ - "gene_synonym", - "JW5768" - ], - [ - "gene_synonym", - "EcoGene:EG12544" - ] - ], - "dna_sequence": "ATGGCAACAGCATGGTATAAACAAGTTAATCCACCACAACGGAAAGCTCTTTTTTCCGCATGGCTTGGATATGTATTTGATGGCTTTGATTTTATGATGATATTTTACATTCTTCATATTATAAAAGCAGATCTTGGCATTACGGATATTCAGGCTACTTTAATAGGGACAGTGGCCTTCATAGCCAGACCTATTGGAGGTGGTTTTTTTGGTGCCATGGCTGATAAATATGGTCGTAAGCCAATGATGATGTGGGCAATTTTCATTTACTCAGTCGGAACAGGCCTTAGCGGTATTGCTACAAACTTATATATGCTCGCAGTTTGCCGTTTTATTGTTGGCTTAGGGATGTCTGGTGAATATGCATGTGCTTCAACTTATGCGGTAGAAAGTTGGCCTAAAAATCTTCAATCTAAAGCTAGTGCTTTTTTGGTAAGTGGTTTTTCTGTTGGAAATATTATTGCGGCACAAATAATCCCTCAGTTTGCTGAAGTATATGGATGGAGAAACTCTTTTTTTATAGGCCTGTTACCAGTTTTACTAGTTCTTTGGATCAGAAAAAGTGCTCCAGAAAGTCAGGAGTGGATTGAAGATAAATATAAGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAGGTACAATATTTTTTGGTTTTGTTGGTGATAAGATTGGTGTAAAAAAAGCCTTTGTAGTCGGTCTAATAACTTCATTTATTTTCCTTTGTCCTCTTTTTTTTATTTCTGTGAAAAACTCTTCTCTTATAGGATTATGTCTCTTTGGATTAATGTTTACAAATTTAGGTATTGCAGGGTTGGTTCCAAAATTTATATATGATTACTTTCCAACAAAATTAAGAGGATTAGGGACCGGTCTTATTTATAACTTAGGGGCAACTGGAGGAATGGCCGCACCTGTATTAGCTACATACATTTCAGGATATTATGGCTTAGGTGTTTCATTATTCATTGTTACGGTTGCATTCTCTGCCTTATTAATTTTGTTAGTTGGTTTTGATATTCCAGGTAAAATTTATAAACTATCCGTGGCTAAATGA", - "dna_sequence_length": 1218, - "functions": [ - "putative MFS transporter, membrane protein" - ], - "id": "CDS_4192", - "location": [ - [ - "NC_000913", - 4504058, - "+", - 1218 - ] - ], - "md5": "b84a808e9427a85bd6971a4b2be146c3", - "parent_gene": "", - "protein_md5": "37fb756d6dbd803e9fea18f0e62f8c0b", - "protein_translation": "MATAWYKQVNPPQRKALFSAWLGYVFDGFDFMMIFYILHIIKADLGITDIQATLIGTVAFIARPIGGGFFGAMADKYGRKPMMMWAIFIYSVGTGLSGIATNLYMLAVCRFIVGLGMSGEYACASTYAVESWPKNLQSKASAFLVSGFSVGNIIAAQIIPQFAEVYGWRNSFFIGLLPVLLVLWIRKSAPESQEWIEDKYKDKSTFLSVFRKPHLSISMIVFLVCFCLFGANWPINGLLPSYLADNGVNTVVISTLMTIAGLGTLTGTIFFGFVGDKIGVKKAFVVGLITSFIFLCPLFFISVKNSSLIGLCLFGLMFTNLGIAGLVPKFIYDYFPTKLRGLGTGLIYNLGATGGMAAPVLATYISGYYGLGVSLFIVTVAFSALLILLVGFDIPGKIYKLSVAK", - "protein_translation_length": 405, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4270" - ], - [ - "gene_synonym", - "EcoGene:EG12545" - ], - [ - "gene_synonym", - "yjhC" - ], - [ - "gene_synonym", - "b4280" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39353" - ], - [ - "gene_synonym", - "NP_418700.2" - ], - [ - "gene_synonym", - "GeneID:948808" - ], - [ - "gene_synonym", - "ASAP:ABE-0014027" - ], - [ - "gene_synonym", - "GI:90111719" - ], - [ - "gene_synonym", - "JW5769" - ] - ], - "dna_sequence": "ATGATTAATTATGGCGTTGTTGGTGTTGGATACTTTGGCGCTGAATTAGCTCGTTTTATGAATATGCATGATAATGCAAAAATTACATGTGTATACGATCCTGAAAATGGAGAAAATATTGCCCGTGAATTGCAGTGTATCAATATGTCAAGCTTGGATGCTTTAGTCTCAAGTAAATTAGTCGATTGCGTGATCGTAGCCACCCCAAATTATCTGCATAAAGAACCAGTAATTAAAGCAGCAAAGAATAAGAAGCATGTTTTTTGTGAAAAACCAATTGCATTAAGTTATGAAGATTGTGTGGATATGGTCAAAGCGTGTAAAGAAGCTGGTGTGACCTTTATGGCCGGGCATATTATGAATTTTTTCAATGGGGTTCAATATGCACGGAAGTTAATTAAAGAAGGTGTTATCGGCGAAATATTATCATGTCATACTAAGAGAAATGGCTGGGAAAACAAACAAGAGAGACTTTCCTGGAAAAAGATGAAAGAACAATCTGGTGGACATCTATATCATCATATACATGAGTTAGATTGTGTTCAGCATTTACTTGGAGAAATACCAGAGACGGTTACTATGATTGGTGGAAATTTGGCCCATTCTGGTCCAGGATTTGGCAATGAAGATGATATGTTATTTATGACCTTGGAATTCCCGTCAGGAAAACTAGCAACCTTAGAGTGGGGGAGTGCATTTAACTGGCCGGAACATTATGTCATCATCAATGGAACTAAAGGCTCTATTAAAATTGATATGCAAGAAACAGCAGGGTCACTTAGGATTGGCGGTCAGACAAAGCATTTTTTGGTCCATGAAACACAAGAAGAAGATGATGATCGTCGGAAAGGCAATATGACCTCAGAAATGGATGGCGCTATAGCATATGGTCATCCAGGAAAAAAAACACCATTATGGCTTGCCAGTTTAATAAGAAAGGAGACGTTATTCCTCCATAATATCCTCTGTGGTGCAAAACCTGAAGAAGATTATATTGACCTTCTCAATGGTGAGGCGGCCATGTCGGCGATTGCTACTGCTGATGCTGCCACTCTTTCAAGATCGCAGGACAGGAAAGTGAAAATCAGTGAGATCATTAAACATACATCAGTAATGTAA", 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"yjhV" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:Q47719" - ] - ], - "dna_sequence": "CTACCTGAAGGGAGCCGCGGTCGCCTGGCAGTTGCAGTAGCAGGAGATCATCCAGCCGCAGTACAGGTCACGATGACTCTGGTTAATGATACCGGCTTTGACCCCGTATTTTCCGGCTCTATCGCTGAATCATGGCGTCAGCAGCCGTGCACACCATCCTATTGTTGTGACTGGGAGGCTGCCACCATGCTTCGCGCTTTCCCTCTGGCGAAAAAGGGAGAAGGACGGGCCCGTCTGCCTTCACTTTATGCCAGCTTCGGTAAGCTGGGTGAGACACCGACTCATGAAGATATCATTGATAACAATCGATCCATCAACTGGCCTGTATAA", - "dna_sequence_length": 330, - "id": "CDS_4200", - "location": [ - [ - "NC_000913", - 4509804, - "+", - 330 - ] - ], - "md5": "63e07bdfc402709e1752a62cedcd9c48", - "parent_gene": "", - "protein_md5": "e7549e3adbbf73b8ae2d6b89b2191333", - "protein_translation": "LPEGSRGRLAVAVAGDHPAAVQVTMTLVNDTGFDPVFSGSIAESWRQQPCTPSYCCDWEAATMLRAFPLAKKGEGRARLPSLYASFGKLGETPTHEDIIDNNRSINWPV", - "protein_translation_length": 109, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948819" - ], - [ - "gene_synonym", - "ECK4277" - ], - [ - "gene_synonym", - "ASAP:ABE-0014057" - 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"gene_synonym", - "fecA" - ], - [ - "gene_synonym", - "ASAP:ABE-0014067" - ], - [ - "gene_synonym", - "ECK4281" - ], - [ - "gene_synonym", - "NP_418711.1" - ] - ], - "dna_sequence": "ATGACGCCGTTACGCGTTTTTCGTAAAACAACACCTTTGGTTAACACCATTCGCCTGAGCCTGCTGCCGCTGGCCGGTCTCTCGTTTTCCGCTTTTGCTGCACAGGTTAATATCGCACCGGGATCGCTCGATAAAGCGCTCAATCAGTATGCCGCACACAGCGGATTTACCCTCTCGGTTGACGCCAGCCTGACGCGCGGCAAGCAGAGCAACGGCCTGCACGGCGATTACGACGTCGAGAGCGGCCTGCAACAACTGCTGGACGGCAGCGGACTGCAGGTAAAACCGCTGGGAAATAACAGCTGGACGCTGGAGCCCGCGCCCGCACCAAAAGAAGATGCCCTGACCGTGGTCGGCGACTGGCTGGGTGATGCGCGTGAAAACGACGTATTTGAACATGCTGGCGCGCGTGACGTGATCCGCCGTGAGGATTTCGCCAAAACCGGCGCAACCACCATGCGTGAGGTACTTAACCGCATCCCTGGCGTCAGCGCGCCGGAAAACAACGGCACCGGCAGCCACGACCTGGCGATGAACTTTGGCATCCGGGGCCTGAACCCGCGCCTCGCCAGCCGCTCGACCGTCCTGATGGACGGCATCCCCGTCCCCTTCGCCCCTTACGGTCAGCCGCAGCTTTCACTGGCTCCCGTTTCGCTCGGCAACATGGATGCCATTGACGTGGTACGCGGTGGTGGTGCGGTGCGTTACGGACCGCAGAGCGTGGGCGGCGTGGTGAACTTTGTTACCCGTGCCATTCCGCAGGACTTTGGTATCGAGGCGGGCGTGGAAGGTCAGCTCAGCCCAACCTCTTCACAAAACAACCCGAAAGAGACGCACAACCTGATGGTGGGCGGCACAGCGGACAACGGTTTTGGCACCGCGCTGCTCTACTCCGGCACGCGCGGCAGTGACTGGCGCGAGCACAGCGCCACCCGCATCGACGACCTGATGCTGAAAAGCAAATATGCGCCGGATGAGGTGCACACCTTCAACAGCCTGCTGCAATATTACGACGGTGAAGCCGACATGCCCGGTGGCCTGTCTCGCGCGGATTACGACGCCGATCGCTGGCAATCCACCCGCCCGTATGACCGCTTCTGGGGTCGTCGCAAGCTGGCGAGCCTGGGCTACCAGTTCCAGCCAGACAGCCAGCATAAATTCAACATTCAGGGGTTCTACACCCAAACCCTGCGCAGCGGCTACCTGGAGCAAGGCAAACGCATCACCCTCTCGCCGCGTAACTACTGGGTGCGCGGTATTGAGCCACGCTACAGCCAGATCTTTATGATCGGCCCTTCCGCGCACGAAGTGGGCGTGGGCTATCGCTATTTGAATGAATCAACGCATGAAATGCGTTACTACACCGCCACCAGCAGCGGGCAGTTGCCGTCCGGCTCAAGCCCTTACGACCGCGATACGCGTTCCGGCACCGAGGCGCACGCCTGGTATCTGGATGACAAAATCGACATCGGCAACTGGACCATCACGCCGGGTATGCGTTTCGAACATATCGAGTCATACCAGAACAACGCCATCACAGGCACGCACGAAGAAGTGAGCTATAACGCACCGCTTCCGGCGTTGAACGTGCTCTATCACCTGACTGACAGCTGGAATCTTTATGCAAACACTGAAGGCTCGTTCGGCACCGTACAGTACAGCCAGATTGGCAAGGCTGTGCAAAGCGGCAATGTTGAACCGGAAAAAGCGCGAACCTGGGAACTCGGTACCCGCTACGACGACGGCGCGCTGACGGCGGAAATGGGGCTGTTCCTGATTAACTTTAACAATCAGTACGACTCCAACCAGACCAACGACACCGTCACTGCACGTGGCAAAACGCGCCATACCGGGCTGGAAACGCAGGCACGTTACGATCTGGGTACGCTAACGCCAACGCTTGATAACGTTTCCATCTACGCCAGCTATGCGTATGTGAACGCGGAAATCCGCGAGAAAGGCGACACCTACGGCAATCTGGTACCATTCTCCCCGAAACATAAAGGCACGCTGGGCGTGGACTACAAGCCAGGAAACTGGACGTTCAATCTGAACAGCGATTTCCAGTCCAGCCAGTTTGCGGATAACGCCAATACGGTGAAAGAGAGCGCCGACGGCAGTACCGGCCGCATTCCCGGCTTCATGCTCTGGGGCGCACGCGTGGCGTATGACTTTGGCCCGCAGATGGCAGATCTGAACCTGGCATTCGGTGTGAAAAACATCTTCGACCAGGACTACTTCATCCGCTCTTATGACGACAACAACAAAGGCATCTATGCAGGCCAGCCGCGCACGCTGTATATGCAGGGGTCGTTGAAGTTCTGA", - 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"protein_translation_length": 774, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418712.1" - ], - [ - "gene_synonym", - "fecR" - ], - [ - "gene_synonym", - "b4292" - ], - [ - "gene_synonym", - "JW4252" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P23485" - ], - [ - "gene_synonym", - "ECK4282" - ], - [ - "gene_synonym", - "EcoGene:EG10292" - ], - [ - "gene_synonym", - "GeneID:949104" - ], - [ - "gene_synonym", - "GI:16132113" - ], - [ - "gene_synonym", - "ASAP:ABE-0014070" - ] - ], - "dna_sequence": "ATGAATCCTTTGTTAACCGATTCCCGCCGTCAGGCGCTGCGTTCAGCTTCCCACTGGTATGCCGTGCTAAGCGGCGAGCGCGTCAGCCCACAACAGGAAGCGCGCTGGCAACAGTGGTATGAACAGGATCAGGATAACCAGTGGGCCTGGCAGCAGGTTGAAAACCTGCGCAACCAGCTTGGCGGTGTGCCTGGCGACGTTGCCAGCCGGGCGTTGCACGATACCCGCCTCACCCGCCGTCACGTGATGAAAGGATTACTGCTGTTGCTCGGCGCTGGCGGAGGCTGGCAGCTCTGGCAGTCGGAAACCGGCGAAGGTCTGCGGGCAGATTACCGCACCGCCAAAGGCACAGTCAGCCGTCAGCAACTGGAAGATGGCTCCCTGCTCACGCTGAATACCCAAAGCGCGGCGGATGTGCGTTTTGATGCGCATCAGCGCACCGTCCGGCTCTGGTACGGTGAAATCGCCATTACTACCGCGAAAGATGCCCTGCAACGCCCCTTCCGTGTCCTGACCCGTCAGGGCCAGCTCACTGCTTTAGGGACAGAATTTACCGTCCGCCAGCAGGATAATTTCACGCAGCTTGACGTGCAGCAGCACGCTGTGGAAGTGCTTCTCGCCAGTGCCCCCGCGCAAAAACGCATCGTGAACGCTGGTGAAAGCCTGCAGTTCAGCGCCTCTGAGTTTGGCGCAGTGAAACCGCTGGATGACGAGAGTACAAGCTGGACGAAGGACATCCTGAGCTTCAGCGATAAACCGCTGGGTGAGGTGATAGCCACGCTAACCCGTTACCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCTGCGCCTGAGCGGGACGTTCCCGCTGAAAAATACCGATGCGATCCTGAACGTTATCGCGCAAACGCTTCCCGTTAAAATTCAGTCTATTACGCGGTACTGGATAAACATTTCACCACTGTAA", - 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4518235, - "-", - 522 - ] - ], - "md5": "bced95741ab3705f3187189e54426652", - "parent_gene": "", - "protein_md5": "950bf3a1043701a72038bd6628bf2e3a", - "protein_translation": "MSDRATTTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMVSETLSTIRDPRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPEGGAPSPEERESQLETLQLLDSMLDGLNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKAVEHCLLFRLEYGL", - "protein_translation_length": 173, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "insA" - ], - [ - "gene_synonym", - "ECK4562" - ], - [ - "gene_synonym", - "EcoGene:EG40001" - ], - [ - "gene_synonym", - "GeneID:948830" - ], - [ - "gene_synonym", - "b4294" - ], - [ - "gene_synonym", - "GI:16132115" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF12" - ], - [ - "gene_synonym", - "ASAP:ABE-0014077" - ], - [ - "gene_synonym", - "NP_418714.1" - ] - ], - "dna_sequence": "GTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAACGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCCTTGCCGTAAAACATGGCAACTACAGTTCACTTACACCGCCTCTCAGCCCGGTAAGCACCAGAAAATCATTGATATGGCCATGAATGGCGTCGGATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA", - "dna_sequence_length": 276, - "functions": [ - "IS1 repressor TnpA" - ], - "id": "CDS_4208", - "location": [ - [ - "NC_000913", - 4518527, - "+", - 276 - ] - ], - "md5": "f5af3585650baef18ef489643e546acb", - "parent_gene": "", - "protein_md5": "6ba2017697fea8233c5451e6b898f588", - "protein_translation": "MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSPCRKTWQLQFTYTASQPGKHQKIIDMAMNGVGCRASARIMGVGLNTVLRHLKNSGRSR", - "protein_translation_length": 91, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK0022" - ], - [ - "gene_synonym", - "GeneID:4056034" - ], - [ - "gene_synonym", - "insB1" - ], - [ - "gene_synonym", - "b4576" - ], - [ - "gene_synonym", - "EcoGene:EG40002" - ], - [ - "gene_synonym", - "ASAP:ABE-0285109" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0CF29" - ] - ], - "dna_sequence": "ATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAACCGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACAGTGGGGCTACGTCGGTGCTAAATCACGTCAGCGCTGGCTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTGGCGCACGTCTTCGGTGAACGCACTCTGGCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGTATAGATGACGGATGGCTGGCCGCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAA", - 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"NP_418716.1" - ], - [ - "gene_synonym", - "GeneID:949102" - ], - [ - "gene_synonym", - "GI:16132117" - ], - [ - "gene_synonym", - "ASAP:ABE-0014084" - ], - [ - "gene_synonym", - "EcoGene:EG12548" - ] - ], - "dna_sequence": "ATGCCACTAATTATCGTTGTGGCAGGGATTGCTTTACTCCTGCTTTTAACCATAAAAATTAAGCTTAATACGTTTGTTTCGTTAATTATTGTCTCGATTGCTGTCGCCATCGCCAGTGGTATGGATTTGAGTAAAGTCGTCACCTCAGTCGAATCCGGACTTGGCGGTACGCTGGGCCATATTGGTTTGATATTTGGCTTCGGTGTTATGCTCGGTCGCTTGCTGGCCGATGCGGGTGGTGCGCAGCGAATAGCGCTGACCATGCTGAATTATTTCGGGAAAAATAAACTTGACTGGGCAGTGGTCTGTTCGGCGTTTATTGTCGGTATCGCACTTTTTTTCGAAGTCGGTTTAATTCTTCTGGTACCTATTTTATTCGCTATTGCCCGTGAAGCAAAAATATCACCGATGTTTATGTGTGTGCCGATGCTTTCTGGTTTGCTGGTCGCACACGGTTTTTTGCCGCCGCACCCCGGCCCGACTGTTATCGCCAGGGAATATGGCGCTGATGTAGGATTGGTACTGATATACGGTATCATTGTCGGCATTCCAACCTTTATTCTTTGCGGCCCGGTATTGAATAAATTCTGCCAGCGCATTATTCCGGACGCCTTTAAAAAAGAGGGGAATATAGCCTCTCTCGGCGCGACCCGCCGATTCAGCGAAAGCGAAATGCCAGGCTTTGGGATCAGTTTTCTCACGGCAATGCTGCCGGTGATCCTGATGGCGGTTGTCACCATCATCCAGATGACTCATGCCAAAAGTGCCGCGGATTCAGGCTTATTTTACAACGTGATACTGTTCTTAGGTAATTCAACGATCGCCATGCTGATTTCACTGCTATTCGCGATCTATACCATGGGCCTGGGGCGCGGGAAAACAATCCCTGACCTGATGGATTCTTGCGGAAAAGCTATCGCGGGTATTGCCGGTCTGCTGCTGATTATCGGTGGTGGTGGTGCATTCAAGCAAGTTCTCATCGACTCTGGCGTTGGTCAGTATATTTCCACCCTGGTTTCGGGTATGGATATTAACCCGATCCTGATGGCCTGGGGCGTGGCCGCATTCCTGCGTATTTGTCTGGGTTCAGCCACCGTCGCGGCGATCTCTACCGCCGGTCTGGTCATCCCATTGTTGGCAGTACATCCCAATACCAACCTGGCCTTGATTACGCTGGCTACCGGTGCCGGATCCTGTATTTGTTCTCACGTTAACGATGCCAGTTTCTGGATGATTAAAGACTTTTTTGGCCTGACCACCAAAGAAACGCTGTTATCCTGGACGCTGATGTCCACACTCTTATCCATCAGTGGGCTGATTTTTATTCTGCTCGCCAGCTTAGTTTTATAA", - 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"type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39359" - ], - [ - "gene_synonym", - "EcoGene:EG12550" - ], - [ - "gene_synonym", - "b4298" - ], - [ - "gene_synonym", - "ECK4287" - ], - [ - "gene_synonym", - "GeneID:948825" - ], - [ - "gene_synonym", - "yjhH" - ], - [ - "gene_synonym", - "GI:90111725" - ], - [ - "gene_synonym", - "JW5775" - ], - [ - "gene_synonym", - "ASAP:ABE-0014089" - ], - [ - "gene_synonym", - "NP_418718.4" - ] - ], - "dna_sequence": "ATGAAAAAATTCAGCGGCATTATTCCACCGGTATCCAGCACGTTTCATCGTGACGGAACCCTTGATAAAAAGGCAATGCGCGAAGTTGCCGACTTCCTGATTAATAAAGGGGTCGACGGGCTGTTTTATCTGGGTACCGGTGGTGAATTTAGCCAAATGAATACAGCCCAGCGCATGGCACTCGCCGAAGAAGCTGTAACCATTGTCGACGGGCGAGTGCCGGTATTGATTGGCGTCGGTTCCCCTTCCACTGACGAAGCGGTCAAACTGGCGCAGCATGCGCAAGCCTACGGCGCTGATGGTATCGTCGCCATCAACCCCTACTACTGGAAAGTCGCACCACGAAATCTTGACGACTATTACCAGCAGATCGCCCGTAGCGTCACCCTACCGGTGATCCTGTACAACTTTCCGGATCTGACGGGTCAGGACTTAACCCCGGAAACCGTGACGCGTCTGGCTCTGCAAAACGAGAATATCGTTGGCATCAAAGACACCATCGACAGCGTTGGTCACTTGCGTACGATGATCAACACAGTTAAGTCGGTACGCCCGTCGTTTTCGGTATTCTGCGGTTACGATGATCATTTGCTGAATACGATGCTGCTGGGCGGCGACGGTGCGATAACCGCCAGCGCTAACTTTGCTCCGGAACTCTCCGTCGGCATCTACCGCGCCTGGCGTGAAGGCGATCTGGCGACCGCTGCGACGCTGAATAAAAAACTACTACAACTGCCCGCTATTTACGCCCTCGAAACACCGTTTGTCTCACTGATCAAATACAGCATGCAGTGTGTCGGGCTGCCTGTAGAGACATATTGCTTACCACCGATTCTTGAAGCATCTGAAGAAGCAAAAGATAAAGTCCACGTGCTGCTTACCGCGCAGGGCATTTTACCAGTCTGA", - 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"ASAP:ABE-0014092" - ], - [ - "gene_synonym", - "JW4261" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39360" - ] - ], - "dna_sequence": "ATGGTTCGCAAAGGGTGTAATTCATTAGTCCGTGCTGAAAAAATATTAACCCACATTGCATGGGTTGGTATGGCAAGTTATATGGAGTTATTAAATAAATTCCAGTACCCCAAAAGCAGCCTGCTTAATTTATTGAATGTAATGGTGGATTGTGGTTTCTTAATTAAAAACAAAAACGGCTACTATTCACTGGGAATAAAAAACTACGAATTGGGTTGTCAGGCGTTACACCGTCAAAATATATTTGAGGTGACTAAGCGGCCAATGCAGGAGTTGTCGCTGAAAAGTGGACTGGTTTGTCATCTTGGGGCGATGGAGAGCATTTCGGCTATCTATCTCGACAAGATCGAAAGTCCGGACTCTGTACCGACGAGCAAAAGCTGGATTGGCAAAAAACTTGAGTTGCATATTACCGCGTTGGGTAAGGCATTATTAGCCTGGAAGACACGAGAAGAACTGGATTATTTTTTAGAAGCACTCACGTTAACTCCACATACGCGCAATACATTTACCGATAAAAAATTGTTTCTGGAAGAATTACAAAAAACACGCCTTCGGGGATGGGCCATAGACAACGAAGAATCAACCTATGGGGCGGTATGTTTAAGTATGCCGGTATTCAATATGTATAACAGAGTTAACTATGCAATCTCACTTTCTGGCGATCCGGTAGTTTATTCAGGAAATAAGATAGACAGCTATCTGGAATTGCTCCGGAAATGCGCTGAGCAAATATCATATGGGCTGGGATACAGAAACGAAAATGAGCACTTACGAAAAGGAAACTGA", - "dna_sequence_length": 789, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_4214", - "location": [ - [ - "NC_000913", - 4525803, - "-", - 789 - ] - ], - "md5": "3ea126af59025c6f4ffc943bbd369f4f", - "parent_gene": "", - "protein_md5": "fb377975b23d27d625c1dae18683ef79", - "protein_translation": "MVRKGCNSLVRAEKILTHIAWVGMASYMELLNKFQYPKSSLLNLLNVMVDCGFLIKNKNGYYSLGIKNYELGCQALHRQNIFEVTKRPMQELSLKSGLVCHLGAMESISAIYLDKIESPDSVPTSKSWIGKKLELHITALGKALLAWKTREELDYFLEALTLTPHTRNTFTDKKLFLEELQKTRLRGWAIDNEESTYGAVCLSMPVFNMYNRVNYAISLSGDPVVYSGNKIDSYLELLRKCAEQISYGLGYRNENEHLRKGN", - "protein_translation_length": 262, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12552" - ], - [ - "gene_synonym", - "NP_418720.1" - ], - [ - "gene_synonym", - "ECK4289" - ], - [ - "gene_synonym", - "b4300" - ], - [ - "gene_synonym", - "ASAP:ABE-0014094" - ], - [ - "gene_synonym", - "GeneID:946830" - ], - [ - "gene_synonym", - "yjhJ" - ], - [ - "gene_synonym", - "GI:16132121" - ], - [ - "gene_synonym", - "JW4262" - ], - [ - "gene_synonym", - "sgcR" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39361" - ] - ], - "dna_sequence": "ATGAGCCAACAGAGACCTGACCGTATCAAACAGATGCTGCACTACCTGTGGCAACATCGTCACCTCTCCACACAGCAGGCCATGGAGCTTTTTGGCTATGCGGAAGCGACTGTCCGTCGTGATTTCCAGTATATTGTCAACCAGTATCCAGGCATGATCCGCGGTCACGGTTGCCTGGACTTCGACGACAGTACAGACGACAAAGAGTACGTCTTCGACGTGAAACGTACATTGCAATCTGTGGCGAAAAGAGAAATAGCTGCCCTTGCCCGAACAATGATCAAAGATGGCGACTGCTTTTTTCTCGACTCCGGCTCAACCTGCCTCGAACTGGCGAAATGCCTGGCCGATGCGCGGGTAAAGGTCATCTGCAACGACATTAAAATCGCCAATGAACTGGGCTGTTTTCCCCATGTGGAAAGTTACATTATCGGAGGACTGATTCGCCCAGGTTATTTTTCGGTAGGAGAGAGTCTGGCGCTGGAGATGATCAATGCCTTTTCCGTAGAACGTGCGTTTATCTCCTGCGATGCGCTGTCGCTGGAGACGGGGATCACCAATGCCACCATGTTTGAGGTCGGGGTGAAAACACGGATTATTCAACGCTCGCGTGAAGTTATTCTCATGGCCGATCACTCAAAATTTGATGCCGTTGAGCCGCATGCTGTAGCAACACTATCATGTATTAAAACGATCATCAGTGACAGCGGGTTACCTGAGACTATTGCACAGCGTTATCAGCGAGCCGGATGTCAGTTGTTTTTACCTCATTCAATAAAGTGA", - "dna_sequence_length": 783, - "functions": [ - "putative DNA-binding transcriptional regulator" - ], - "id": "CDS_4215", - "location": [ - [ - "NC_000913", - 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"protein_translation": "MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIHGFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTHPLLNKEVQALKNWLSIRTSYPHAESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRLIQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHAVL", - "protein_translation_length": 200, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADH7" - ], - [ - "gene_synonym", - "GI:16132134" - ], - [ - "gene_synonym", - "GeneID:948836" - ], - [ - "gene_synonym", - "b4313" - ], - [ - "gene_synonym", - "JW4276" - ], - [ - "gene_synonym", - "hyp" - ], - [ - "gene_synonym", - "EcoGene:EG10312" - ], - [ - "gene_synonym", - "fimE" - ], - [ - "gene_synonym", - "NP_418733.1" - ], - [ - "gene_synonym", - "ECK4304" - ], - [ - "gene_synonym", - "ASAP:ABE-0014143" - ] - ], - "dna_sequence": "GTGAGTAAACGTCGTTATCTTACCGGTAAAGAAGTTCAGGCCATGATGCAGGCGGTTTGTTACGGGGCAACGGGAGCCAGAGATTATTGTCTTATTCTGTTGGCATATCGGCATGGGATGCGTATTAGTGAACTGCTTGATCTGCATTATCAGGACCTTGACCTTAATGAAGGTAGAATAAATATTCGCCGACTGAAGAACGGATTTTCTACCGTTCACCCGTTACGTTTTGATGAGCGTGAAGCCGTGGAACGCTGGACCCAGGAACGTGCTAACTGGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACTCATCCTCATATGTTAAGGCATGCTTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGA", - 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"gene_synonym", - "ASAP:ABE-0014145" - ], - [ - "gene_synonym", - "ECK4305" - ], - [ - "gene_synonym", - "EcoGene:EG10308" - ] - ], - "dna_sequence": "ATGAAAATTAAAACTCTGGCAATCGTTGTTCTGTCGGCTCTGTCCCTCAGTTCTACAGCGGCTCTGGCCGCTGCCACGACGGTTAATGGTGGGACCGTTCACTTTAAAGGGGAAGTTGTTAACGCCGCTTGCGCAGTTGATGCAGGCTCTGTTGATCAAACCGTTCAGTTAGGACAGGTTCGTACCGCATCGCTGGCACAGGAAGGAGCAACCAGTTCTGCTGTCGGTTTTAACATTCAGCTGAATGATTGCGATACCAATGTTGCATCTAAAGCCGCTGTTGCCTTTTTAGGTACGGCGATTGATGCGGGTCATACCAACGTTCTGGCTCTGCAGAGTTCAGCTGCGGGTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAA", - "dna_sequence_length": 549, - "functions": [ - "major type 1 subunit fimbrin (pilin)" - ], - "id": "CDS_4233", - "location": [ - [ - "NC_000913", - 4543115, - "+", - 549 - ] - ], - "md5": "123648dd8a81fd15ca5d41ad004bc373", - "parent_gene": "", - "protein_md5": "a87ba622c92d55b1135e52f538af07f4", - "protein_translation": "MKIKTLAIVVLSALSLSSTAALAAATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVLALQSSAAGSATNVGVQILDRTGAALTLDGATFSSETTLNNGTNTIPFQARYFATGAATPGAANADATFKVQYQ", - "protein_translation_length": 182, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:90111729" - ], - [ - "gene_synonym", - "b4315" - ], - [ - "gene_synonym", - "NP_418735.2" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39264" - ], - [ - "gene_synonym", - "EcoGene:EG11974" - ], - [ - "gene_synonym", - "GeneID:948841" - ], - [ - "gene_synonym", - "ECK4306" - ], - [ - "gene_synonym", - "fimI" - ], - [ - "gene_synonym", - "ASAP:ABE-0014147" - ], - [ - "gene_synonym", - "JW5779" - ] - ], - "dna_sequence": "ATGAAAAGGAAGAGATTATTTCTATTAGCGTCGTTGCTGCCAATGTTTGCTCTGGCCGGAAATAAATGGAATACCACGTTGCCCGGCGGAAATATGCAATTTCAGGGCGTCATTATTGCGGAAACTTGCCGGATTGAAGCCGGTGATAAACAAATGACGGTCAATATGGGGCAAATCAGCAGTAACCGGTTTCATGCGGTTGGGGAAGATAGCGCACCGGTGCCTTTTGTTATTCATTTACGGGAATGTAGCACGGTGGTGAGTGAACGTGTAGGTGTGGCGTTTCACGGTGTCGCGGATGGTAAAAATCCGGATGTGCTTTCCGTGGGAGAGGGGCCAGGGATAGCCACCAATATTGGCGTAGCGTTGTTTGATGATGAAGGAAACCTCGTACCGATTAATCGTCCTCCAGCAAACTGGAAACGGCTTTATTCAGGCTCTACTTCGCTACATTTCATCGCCAAATATCGTGCTACCGGGCGTCGGGTTACTGGCGGCATCGCCAATGCCCAGGCCTGGTTCTCTTTAACCTATCAGTAA", - "dna_sequence_length": 540, - "functions": [ - "fimbrial protein involved in type 1 pilus biosynthesis" - ], - "id": "CDS_4234", - "location": [ - [ - "NC_000913", - 4543728, - "+", - 540 - ] - ], - "md5": "dcc9dadee7e4c123c8ed47a5b63e3af0", - "parent_gene": "", - "protein_md5": "5a22c55d20f18030e04191659a3fa13a", - "protein_translation": "MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCRIEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGKNPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPANWKRLYSGSTSLHFIAKYRATGRRVTGGIANAQAWFSLTYQ", - "protein_translation_length": 179, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW4279" - ], - [ - "gene_synonym", - "GI:49176488" - ], - [ - "gene_synonym", - "b4316" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P31697" - ], - [ - "gene_synonym", - "EcoGene:EG10310" - ], - [ - "gene_synonym", - "NP_418736.3" - ], - [ - "gene_synonym", - "fimC" - ], - [ - "gene_synonym", - "ASAP:ABE-0014149" - ], - [ - "gene_synonym", - "ECK4307" - ], - [ - "gene_synonym", - "GeneID:948843" - ] - ], - "dna_sequence": "GTGAGTAATAAAAACGTCAATGTAAGGAAATCGCAGGAAATAACATTCTGCTTGCTGGCAGGTATCCTGATGTTCATGGCAATGATGGTTGCCGGACGCGCTGAAGCGGGAGTGGCCTTAGGTGCGACTCGCGTAATTTATCCGGCAGGGCAAAAACAAGAGCAACTTGCCGTGACAAATAATGATGAAAATAGTACCTATTTAATTCAATCATGGGTGGAAAATGCCGATGGTGTAAAGGATGGTCGTTTTATCGTGACGCCTCCTCTGTTTGCGATGAAGGGAAAAAAAGAGAATACCTTACGTATTCTTGATGCAACAAATAACCAATTGCCACAGGACCGGGAAAGTTTATTCTGGATGAACGTTAAAGCGATTCCGTCAATGGATAAATCAAAATTGACTGAGAATACGCTACAGCTCGCAATTATCAGCCGCATTAAACTGTACTATCGCCCGGCTAAATTAGCGTTGCCACCCGATCAGGCCGCAGAAAAATTAAGATTTCGTCGTAGCGCGAATTCTCTGACGCTGATTAACCCGACACCCTATTACCTGACGGTAACAGAGTTGAATGCCGGAACCCGGGTTCTTGAAAATGCATTGGTGCCTCCAATGGGCGAAAGCACGGTTAAATTGCCTTCTGATGCAGGAAGCAATATTACTTACCGAACAATAAATGATTATGGCGCACTTACCCCCAAAATGACGGGCGTAATGGAATAA", - "dna_sequence_length": 726, - "functions": [ - "periplasmic chaperone" - ], - "id": "CDS_4235", - "location": [ - [ - "NC_000913", - 4544304, - "+", - 726 - ] - ], - "md5": "f2d5982b501804b50d74bd6ab421103b", - "parent_gene": "", - "protein_md5": "ad6b5829a385eacdc226d898b4537d04", - "protein_translation": "MSNKNVNVRKSQEITFCLLAGILMFMAMMVAGRAEAGVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAIPSMDKSKLTENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGTRVLENALVPPMGESTVKLPSDAGSNITYRTINDYGALTPKMTGVME", - "protein_translation_length": 241, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:16132138" - ], - [ - "gene_synonym", - "b4317" - ], - [ - "gene_synonym", - "EcoGene:EG10311" - ], - [ - "gene_synonym", - "fimD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P30130" - ], - [ - "gene_synonym", - "ECK4308" - ], - [ - "gene_synonym", - "JW5780" - ], - [ - "gene_synonym", - "GeneID:948844" - ], - [ - "gene_synonym", - "NP_418737.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0014151" - ] - ], - "dna_sequence": "ATGTCATATCTGAATTTAAGACTTTACCAGCGAAACACACAATGCTTGCATATTCGTAAGCATCGTTTGGCTGGTTTTTTTGTCCGACTCGTTGTCGCCTGTGCTTTTGCCGCACAGGCACCTTTGTCATCTGCCGACCTCTATTTTAATCCGCGCTTTTTAGCGGATGATCCCCAGGCTGTGGCCGATTTATCGCGTTTTGAAAATGGGCAAGAATTACCGCCAGGGACGTATCGCGTCGATATCTATTTGAATAATGGTTATATGGCAACGCGTGATGTCACATTTAATACGGGCGACAGTGAACAAGGGATTGTTCCCTGCCTGACACGCGCGCAACTCGCCAGTATGGGGCTGAATACGGCTTCTGTCGCCGGTATGAATCTGCTGGCGGATGATGCCTGTGTGCCATTAACCACAATGGTCCAGGACGCTACTGCGCATCTGGATGTTGGTCAGCAGCGACTGAACCTGACGATCCCTCAGGCATTTATGAGTAATCGCGCGCGTGGTTATATTCCTCCTGAGTTATGGGATCCCGGTATTAATGCCGGATTGCTCAATTATAATTTCAGCGGAAATAGTGTACAGAATCGGATTGGGGGTAACAGCCATTATGCATATTTAAACCTACAGAGTGGGTTAAATATTGGTGCGTGGCGTTTACGCGACAATACCACCTGGAGTTATAACAGTAGCGACAGATCATCAGGTAGCAAAAATAAATGGCAGCATATCAATACCTGGCTTGAGCGAGACATAATACCGTTACGTTCCCGGCTGACGCTGGGTGATGGTTATACTCAGGGCGATATTTTCGATGGTATTAACTTTCGCGGCGCACAATTGGCCTCAGATGACAATATGTTACCCGATAGTCAAAGAGGATTTGCCCCGGTGATCCACGGTATTGCTCGTGGTACTGCACAGGTCACTATTAAACAAAATGGGTATGACATTTATAATAGTACGGTGCCACCGGGGCCTTTTACCATCAACGATATCTATGCCGCAGGTAATAGTGGTGACTTGCAGGTAACGATCAAAGAGGCTGACGGCAGCACGCAGATTTTTACCGTACCCTATTCGTCAGTCCCGCTTTTGCAACGTGAAGGGCATACTCGTTATTCCATTACGGCAGGAGAATACCGTAGTGGAAATGCGCAGCAGGAAAAAACCCGCTTTTTCCAGAGTACATTACTCCACGGCCTTCCGGCTGGCTGGACAATATATGGTGGAACGCAACTGGCGGATCGTTATCGTGCTTTTAATTTCGGTATCGGGAAAAACATGGGGGCACTGGGCGCTCTGTCTGTGGATATGACGCAGGCTAATTCCACACTTCCCGATGACAGTCAGCATGACGGACAATCGGTGCGTTTTCTCTATAACAAATCGCTCAATGAATCAGGCACGAATATTCAGTTAGTGGGTTACCGTTATTCGACCAGCGGATATTTTAATTTCGCTGATACAACATACAGTCGAATGAATGGCTACAACATCGAAACACAGGACGGAGTTATTCAGGTTAAGCCGAAATTCACCGACTATTACAACCTCGCTTATAACAAACGCGGGAAATTACAACTCACCGTTACTCAGCAACTCGGGCGCACATCAACACTGTATTTGAGTGGTAGCCATCAAACTTATTGGGGAACGAGTAATGTCGATGAGCAATTCCAGGCTGGATTAAATACTGCGTTCGAAGATATCAACTGGACGCTCAGCTATAGCCTGACGAAAAACGCCTGGCAAAAAGGACGGGATCAGATGTTAGCGCTTAACGTCAATATTCCTTTCAGCCACTGGCTGCGTTCTGACAGTAAATCTCAGTGGCGACATGCCAGTGCCAGCTACAGCATGTCACACGATCTCAACGGTCGGATGACCAATCTGGCTGGTGTATACGGTACGTTGCTGGAAGACAACAACCTCAGCTATAGCGTGCAAACCGGCTATGCCGGGGGAGGCGATGGAAATAGCGGAAGTACAGGCTACGCCACGCTGAATTATCGCGGTGGTTACGGCAATGCCAATATCGGTTACAGCCATAGCGATGATATTAAGCAGCTCTATTACGGAGTCAGCGGTGGGGTACTGGCTCATGCCAATGGCGTAACGCTGGGGCAGCCGTTAAACGATACGGTGGTGCTTGTTAAAGCGCCTGGCGCAAAAGATGCAAAAGTCGAAAACCAGACGGGGGTGCGTACCGACTGGCGTGGTTATGCCGTGCTGCCTTATGCCACTGAATATCGGGAAAATAGAGTGGCGCTGGATACCAATACCCTGGCTGATAACGTCGATTTAGATAACGCGGTTGCTAACGTTGTTCCCACTCGTGGGGCGATCGTGCGAGCAGAGTTTAAAGCGCGCGTTGGGATAAAACTGCTCATGACGCTGACCCACAATAATAAGCCGCTGCCGTTTGGGGCGATGGTGACATCAGAGAGTAGCCAGAGTAGCGGCATTGTTGCGGATAATGGTCAGGTTTACCTCAGCGGAATGCCTTTAGCGGGAAAAGTTCAGGTGAAATGGGGAGAAGAGGAAAATGCTCACTGTGTCGCCAATTATCAACTGCCACCAGAGAGTCAGCAGCAGTTATTAACCCAGCTATCAGCTGAATGTCGTTAA", - 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"protein_translation_length": 878, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4309" - ], - [ - "gene_synonym", - "GI:16132139" - ], - [ - "gene_synonym", - "fimF" - ], - [ - "gene_synonym", - "b4318" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08189" - ], - [ - "gene_synonym", - "EcoGene:EG10313" - ], - [ - "gene_synonym", - "NP_418738.1" - ], - [ - "gene_synonym", - "JW4281" - ], - [ - "gene_synonym", - "ASAP:ABE-0014153" - ], - [ - "gene_synonym", - "GeneID:948845" - ] - ], - "dna_sequence": "ATGAGAAACAAACCTTTTTATCTTCTGTGCGCTTTTTTGTGGCTGGCGGTGAGTCACGCTTTGGCTGCGGATAGCACGATTACTATCCGCGGCTATGTCAGGGATAACGGCTGTAGTGTGGCCGCTGAATCAACCAATTTTACTGTTGATCTGATGGAAAACGCGGCGAAGCAATTTAACAACATTGGCGCGACGACTCCTGTTGTTCCATTTCGTATTTTGCTGTCACCCTGTGGTAATGCCGTTTCTGCCGTAAAGGTTGGGTTTACTGGCGTTGCAGATAGCCACAATGCCAACCTGCTTGCACTTGAAAATACGGTGTCAGCGGCTTCGGGACTGGGAATACAGCTTCTGAATGAGCAGCAAAATCAAATACCCCTTAATGCTCCATCGTCCGCGCTTTCGTGGACGACCCTGACGCCGGGTAAACCAAATACGCTGAATTTTTACGCCCGGCTAATGGCGACACAGGTGCCTGTCACTGCGGGGCATATCAATGCCACGGCTACCTTCACTCTTGAATATCAGTAA", - "dna_sequence_length": 531, - "functions": [ - "minor component of type 1 fimbriae" - ], - "id": "CDS_4237", - "location": [ - [ - "NC_000913", - 4547742, - "+", - 531 - ] - ], - "md5": "4d8f9fde3560885e4847ec3064e2ba30", - "parent_gene": "", - "protein_md5": "9a61cbd8e64ac2456e2eb2bd91990de7", - "protein_translation": "MRNKPFYLLCAFLWLAVSHALAADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNEQQNQIPLNAPSSALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ", - "protein_translation_length": 176, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "JW4282" - ], - [ - "gene_synonym", - "b4319" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08190" - ], - [ - "gene_synonym", - "NP_418739.1" - ], - [ - "gene_synonym", - "EcoGene:EG10314" - ], - [ - "gene_synonym", - "fimG" - ], - [ - "gene_synonym", - "ASAP:ABE-0014155" - ], - [ - "gene_synonym", - "GI:16132140" - ], - [ - "gene_synonym", - "ECK4310" - ], - [ - "gene_synonym", - "GeneID:948846" - ] - ], - "dna_sequence": "ATGAAATGGTGCAAACGTGGGTATGTATTGGCGGCAATATTGGCGCTCGCAAGTGCGACGATACAGGCAGCCGATGTCACCATCACGGTGAACGGTAAGGTCGTCGCCAAACCGTGTACGGTTTCCACCACCAATGCCACGGTTGATCTCGGCGATCTTTATTCTTTCAGTCTTATGTCTGCCGGGGCGGCATCGGCCTGGCATGATGTTGCGCTTGAGTTGACTAATTGTCCGGTGGGAACGTCGAGGGTCACTGCCAGCTTCAGCGGGGCAGCCGACAGTACCGGATATTATAAAAACCAGGGGACCGCGCAAAACATCCAGTTAGAGCTACAGGATGACAGTGGCAACACATTGAATACTGGCGCAACCAAAACAGTTCAGGTGGATGATTCCTCACAATCAGCGCACTTCCCGTTACAGGTCAGAGCATTGACAGTAAATGGCGGAGCCACTCAGGGAACCATTCAGGCAGTGATTAGCATCACCTATACCTACAGCTGA", - "dna_sequence_length": 504, - "functions": [ - "minor component of type 1 fimbriae" - ], - "id": "CDS_4238", - "location": [ - [ - "NC_000913", - 4548285, - "+", - 504 - ] - ], - "md5": "202faeb5277c6be77a630af3151f33b2", - "parent_gene": "", - "protein_md5": "766a916333e7ba72d6e03f5f8664f02f", - "protein_translation": "MKWCKRGYVLAAILALASATIQAADVTITVNGKVVAKPCTVSTTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS", - 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"dna_sequence_length": 1344, - "functions": [ - "fructuronate transporter" - ], - "id": "CDS_4240", - "location": [ - [ - "NC_000913", - 4551296, - "-", - 1344 - ] - ], - "md5": "744f469ab0d023c1618662dbbd0a1618", - "parent_gene": "", - "protein_md5": "37684d301977c26fff05b379b229dcdd", - "protein_translation": "MHVLNILWVVFGIGLMLVLNLKFKINSMVALLVAALSVGMLAGMDLMSLLHTMKAGFGNTLGELAIIVVFGAVIGKLMVDSGAAHQIAHTLLARLGLRYVQLSVIIIGLIFGLAMFYEVAFIMLAPLVIVIAAEAKIPFLKLAIPAVAAATTAHSLFPPQPGPVALVNAYGADMGMVYIYGVLVTIPSVICAGLILPKFLGNLERPTPSFLKADQPVDMNNLPSFGVSILVPLIPAIIMISTTIANIWLVKDTPAWEVVNFIGSSPIAMFIAMVVAFVLFGTARGHDMQWVMNAFESAVKSIAMVILIIGAGGVLKQTIIDTGIGDTIGMLMSHGNISPYIMAWLITVLIRLATGQGVVSAMTAAGIISAAILDPATGQLVGVNPALLVLATAAGSNTLTHINDASFWLFKGYFDLSVKDTLKTWGLLELVNSVVGLIIVLIISMVA", - "protein_translation_length": 447, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4322" - ], - [ - "gene_synonym", - "NP_418742.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24215" - ], - [ - "gene_synonym", - "uxuA" - ], - [ - "gene_synonym", - "ASAP:ABE-0014173" - ], - [ - "gene_synonym", - "GeneID:947082" - ], - [ - "gene_synonym", - "GI:16132143" - ], - [ - "gene_synonym", - "EcoGene:EG11066" - ], - [ - "gene_synonym", - "JW4285" - ], - [ - "gene_synonym", - "ECK4313" - ] - ], - "dna_sequence": "ATGGAACAGACCTGGCGCTGGTACGGCCCAAACGATCCGGTTTCTTTAGCTGATGTCCGTCAGGCGGGCGCAACTGGCGTGGTTACCGCGCTGCACCATATCCCGAACGGCGAAGTATGGTCCGTTGAAGAGATCCTCAAACGCAAGGCGATCATTGAAGACGCAGGCCTGGTGTGGTCTGTCGTAGAAAGCGTGCCAATTCACGAAGATATCAAAACCCACACTGGCAACTATGAGCAGTGGATCGCTAACTATCAGCAGACTCTGCGCAACCTGGCGCAGTGTGGCATTCGCACCGTGTGCTACAACTTCATGCCGGTGCTCGACTGGACCCGTACTGACCTCGAATACGTGCTGCCAGACGGCTCCAAAGCTCTGCGCTTCGACCAGATCGAATTCGCTGCATTCGAAATGCATATCCTGAAACGCCCAGGCGCGGAAGCGGATTACACCGAAGAAGAAATTGCTCAGGCAGCTGAACGCTTCGCCACTATGAGCGATGAAGACAAAGCGCGTCTGACCCGTAACATCATTGCTGGTCTTCCGGGCGCGGAAGAAGGCTACACCCTCGACCAGTTCCGTAAACACCTGGAGCTGTACAAAGATATCGACAAAGCGAAGCTGCGCGAAAACTTTGCCGTCTTCCTGAAAGCGATTATTCCAGTTGCTGAAGAAGTCGGCGTGCGTATGGCTGTTCACCCGGACGATCCGCCGCGCCCGATCCTCGGCCTGCCGCGCATTGTTTCCACCATTGAAGATATGCAGTGGATGGTTGATACCGTAAACAGCATGGCAAACGGTTTTACCATGTGCACCGGTTCCTACGGCGTGCGTGCTGACAACGATCTGGTTGATATGATCAAGCAGTTCGGTCCGCGTATTTACTTCACCCATCTGCGCTCCACCATGCGTGAAGATAACCCGAAAACCTTCCACGAAGCGGCGCACCTGAACGGTGACGTTGATATGTACGAAGTGGTGAAAGCGATTGTTGAAGAAGAACACCGTCGTAAAGCGGAAGGCAAAGAAGACCTGATCCCGATGCGTCCGGACCACGGTCATCAGATGCTGGACGACCTGAAGAAGAAAACCAACCCAGGTTACTCCGCAATTGGTCGTCTGAAAGGCCTGGCCGAAGTTCGCGGTGTCGAACTGGCGATCCAGCGCGCTTTCTTTAGCCGTTAA", - 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"gene_synonym", - "GeneID:946795" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39160" - ], - [ - "gene_synonym", - "ECK4314" - ], - [ - "gene_synonym", - "JW4286" - ], - [ - "gene_synonym", - "GI:16132144" - ] - ], - "dna_sequence": "ATGACTACTATTGTTGACAGCAATCTGCCGGTTGCCCGCCCGTCATGGGATCATTCTCGTCTGGAATCACGCATTGTGCATCTCGGTTGCGGGGCGTTTCACCGCGCGCACCAGGCGCTGTATACCCATCATCTGCTGGAAAGCACCGACAGCGACTGGGGCATCTGCGAAGTTAACCTGATGCCAGGCAACGACCGCGTGCTGATCGAAAACCTGAAAAAACAGCAACTGCTGTACACCGTAGCGGAAAAAGGCGCAGAGAGCACCGAGCTGAAAATTATCGGTTCGATGAAAGAAGCGCTGCATCCGGAAATCGATGGCTGCGAAGGTATTCTCAACGCGATGGCGCGTCCGCAAACGGCGATTGTCTCTCTAACGGTCACGGAAAAAGGCTACTGCGCTGATGCGGCAAGCGGTCAACTGGATCTCAATAACCCGCTGATCAAGCACGATCTGGAAAACCCGACTGCGCCGAAGTCCGCGATTGGTTACATCGTCGAAGCGTTGCGTCTGCGTCGTGAAAAAGGGTTGAAAGCGTTTACGGTGATGTCCTGCGATAACGTGCGTGAAAACGGTCATGTGGCGAAGGTCGCGGTACTGGGGCTGGCTCAGGCGCGTGACCCGCAGCTGGCGGCATGGATTGAAGAAAATGTCACCTTCCCGTGCACCATGGTTGACCGCATCGTTCCGGCGGCGACGCCAGAAACCTTACAGGAAATTGCTGACCAGCTGGGTGTTTACGACCCGTGCGCCATTGCCTGCGAACCGTTCCGTCAGTGGGTGATTGAAGATAACTTCGTTAATGGTCGCCCGGATTGGGATAAAGTGGGCGCACAGTTCGTTGCAGACGTTGTGCCGTTCGAAATGATGAAGCTGCGTATGCTGAACGGCAGCCACTCTTTTCTGGCGTACCTCGGTTACCTCGGCGGCTATGAAACCATTGCCGACACCGTGACTAACCCGGCTTATCGCAAAGCGGCCTTTGCCCTGATGATGCAGGAACAAGCGCCAACGCTGTCGATGCCGGAAGGTACAGACCTGAACGCCTATGCGACGCTGCTGATCGAGCGTTTCAGCAACCCGTCTCTGCGTCACCGTACCTGGCAGATTGCGATGGACGGCAGCCAGAAGTTACCGCAGCGTCTGCTGGACCCGGTGCGTCTGCACCTGCAAAACGGCGGCAGCTGGCGTCACCTGGCGCTGGGCGTGGCTGGCTGGATGCGTTACACCCAGGGCGTGGATGAGCAGGGTAATGCCATTGACGTGGTCGACCCGATGCTGGCGGAGTTCCAGAAGATCAACGCGCAGTATCAGGGCGCAGACCGCGTGAAAGCGCTGCTGGGCCTGAGCGGTATTTTTGCCGATGATCTGCCGCAGAATGCCGACTTTGTTGGCGCAGTGACGGCGGCATATCAGCAGCTGTGCGAACGCGGTGCGCGCGAGTGTGTGGCTGCGCTGTAA", - 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"UniProtKB/Swiss-Prot:P39161" - ], - [ - "gene_synonym", - "ASAP:ABE-0014179" - ], - [ - "gene_synonym", - "GeneID:948849" - ], - [ - "gene_synonym", - "GI:16132145" - ], - [ - "gene_synonym", - "uxuR" - ], - [ - "gene_synonym", - "NP_418744.1" - ], - [ - "gene_synonym", - "ECK4315" - ], - [ - "gene_synonym", - "JW4287" - ] - ], - "dna_sequence": "ATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCCGCGATCTGATCATAAAGACGCCGTACAATCCTGGCGAACGGCTGCCGCCGGAGCGTGAAATTGCAGAAATGCTTGATGTCACGCGGACGGTGGTACGTGAAGCGCTGATCATGCTGGAGATCAAAGGGCTGGTGGAAGTACGCCGGGGTGCCGGTATCTATGTTCTTGATAACTCAGGCAGCCAGAACACAGACAGTCCGGATGCCAACGTCTGCAACGATGCCGGTCCTTTTGAGCTGTTACAGGCGCGGCAGTTATTGGAGAGCAACATCGCCGAGTTTGCCGCTTTGCAGGCTACCCGCGAAGATATCGTCAAAATGCGTCAGGCATTGCAACTGGAAGAGCGTGAACTGGCTTCCAGTGCGCCGGGCAGCAGCGAAAGCGGTGACATGCAGTTCCATCTCGCTATTGCCGAAGCAACGCATAACAGCATGCTGGTGGAGCTGTTCCGTCAGTCCTGGCAGTGGCGGGAAAACAATCCAATGTGGATCCAGTTGCACAGCCATCTGGATGACAGCCTGTATCGCAAAGAGTGGTTGGGCGATCACAAACAGATCCTCGCCGCGTTAATCAAAAAAGATGCCCGAGCGGCGAAGCTGGCAATGTGGCAGCATCTGGAAAACGTTAAGCAACGTCTGCTGGAATTCTCGAACGTTGACGATATTTATTTTGATGGCTATCTGTTTGATTCATGGCCGCTGGATAAAGTCGACGCCTGA", - "dna_sequence_length": 774, - "functions": [ - "fructuronate-inducible hexuronate regulon transcriptional repressor", - "autorepressor" - ], - "id": "CDS_4243", - "location": [ - [ - "NC_000913", - 4554576, - "+", - 774 - ] - ], - "md5": "b6570e143c294777159a7a517724ce56", - "parent_gene": "", - "protein_md5": "70486e9a70fd07afad407569bd60334b", - "protein_translation": "MKSATSAQRPYQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIKGLVEVRRGAGIYVLDNSGSQNTDSPDANVCNDAGPFELLQARQLLESNIAEFAALQATREDIVKMRQALQLEERELASSAPGSSESGDMQFHLAIAEATHNSMLVELFRQSWQWRENNPMWIQLHSHLDDSLYRKEWLGDHKQILAALIKKDARAAKLAMWQHLENVKQRLLEFSNVDDIYFDGYLFDSWPLDKVDA", - "protein_translation_length": 257, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GI:49176489" - ], - [ - "gene_synonym", - "NP_418745.3" - ], - [ - "gene_synonym", - "ASAP:ABE-0014181" - ], - [ - "gene_synonym", - "b4325" - ], - [ - "gene_synonym", - "JW4288" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39374" - ], - [ - "gene_synonym", - "EcoGene:EG12564" - ], - [ - "gene_synonym", - "yjiC" - ], - [ - "gene_synonym", - "ECK4316" - ], - [ - "gene_synonym", - "GeneID:948850" - ] - ], - "dna_sequence": "ATGTCTATGCCATTAAGCAATGCCCTTCAGAGTCAAATTATTACAGATGCTCACTTCCTTCATCACCCAATAGTCGACAGTGAGTTTACACGTAAATTAAAATATGCACGCATGGATTCGGAAAACATCTATCTTCCGCCTCTTACTCGTGGCAATAACCATAATTACGATGGAAAAAGCGTTGTCGAAATTAGAAAACTTGATATTAGTAAAGAGCCTTGGCCATTTAATTATGTGACAGGAGCATGCAGAGAATCCGATGGTATTACAACAACAGGACGTATGCTCTATCGGAACTTGAAAATCACCTCAGCTTTAGACGAAATATATGGTGGCATATGTAAAAAGGCGCATGCTACCACAGAGTTAGCAGAAGGTTTACGGCTAAATTTATTTATGAAGAGCCCTTTCGATCCTGTTGAGGACTATACAGTTCATGAAATAACATTAGGCCCTGGTTGCAATGTTCCTGGTTATGCCGGAACCACGATAGGATATATTTCAACCCTTCCAGCTTCTCAGGCAAAAAGATGGACCAATGAGCAGCCAAGGATTGATATCTATATTGATCAGATAATGACGGTAACAGGGGTAGCAAATTCTTCCGGATTCGCCCTTGCCGCATTACTTAATGCTAATATTGAGTTGGGTAATGACCCAATAATTGGTATAGAAGCCTATCCCGGTACCGCGGAGATCCATGCAAAAATGGGATATAAAGTTATCCCGGGTGATGAAAATGCACCACTCAAACGTATGACTCTGCAACCGTCATCTCTTCCAGAACTGTTTGAATTAAAAAATGGTGAATGGAATTATATTGGTAAATAA", - "dna_sequence_length": 831, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_4244", - "location": [ - [ - "NC_000913", - 4556320, - "-", - 831 - ] - ], - "md5": "9d895fd409529ded0edff7ed374dee53", - "parent_gene": "", - "protein_md5": "4a4a9858a78f783092c7cb465f0d5647", - "protein_translation": "MSMPLSNALQSQIITDAHFLHHPIVDSEFTRKLKYARMDSENIYLPPLTRGNNHNYDGKSVVEIRKLDISKEPWPFNYVTGACRESDGITTTGRMLYRNLKITSALDEIYGGICKKAHATTELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGCNVPGYAGTTIGYISTLPASQAKRWTNEQPRIDIYIDQIMTVTGVANSSGFALAALLNANIELGNDPIIGIEAYPGTAEIHAKMGYKVIPGDENAPLKRMTLQPSSLPELFELKNGEWNYIGK", - "protein_translation_length": 276, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418746.4" - ], - [ - "gene_synonym", - "GeneID:948851" - ], - [ - "gene_synonym", - "b4326" - ], - [ - "gene_synonym", - "ASAP:ABE-0014190" - ], - [ - "gene_synonym", - "iraD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39375" - ], - [ - "gene_synonym", - "GI:90111730" - ], - [ - "gene_synonym", - 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"protein_translation_length": 130, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4327" - ], - [ - "gene_synonym", - "hypT" - ], - [ - "gene_synonym", - "qseD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39376" - ], - [ - "gene_synonym", - "GI:16132148" - ], - [ - "gene_synonym", - "ECK4318" - ], - [ - "gene_synonym", - "ASAP:ABE-0014192" - ], - [ - "gene_synonym", - "NP_418747.1" - ], - [ - "gene_synonym", - "JW4290" - ], - [ - "gene_synonym", - "EcoGene:EG12566" - ], - [ - "gene_synonym", - "GeneID:948852" - ], - [ - "gene_synonym", - "yjiE" - ] - ], - "dna_sequence": "ATGGATGACTGTGGTGCGATTTTGCATAATATTGAAACCAAATGGCTTTATGATTTTCTGACCCTGGAAAAATGCCGCAATTTTTCCCAGGCGGCAGTCAGTCGCAACGTCTCGCAACCGGCATTCAGCCGCCGCATCCGTGCGCTGGAACAGGCGATTGGTGTTGAATTGTTTAACCGCCAGGTAACGCCGCTGCAACTCTCAGAACAAGGGAAAATCTTCCATTCGCAGATCCGCCATCTGTTGCAACAGTTAGAGAGCAATCTGGCAGAGCTGCGTGGCGGCAGCGATTACGCGCAACGAAAAATCAAGATAGCCGCTGCACACTCTCTTTCCCTCGGGCTGTTACCGTCCATTATCAGCCAGATGCCGCCGCTCTTTACCTGGGCAATTGAAGCTATTGATGTCGATGAAGCGGTCGATAAACTGCGTGAAGGGCAAAGTGACTGTATTTTTTCCTTTCACGACGAAGATTTGCTGGAAGCGCCGTTTGACCACATTCGCTTATTTGAATCTCAATTGTTCCCTGTCTGCGCCAGTGACGAACACGGAGAAGCACTTTTTAACCTCGCGCAGCCACACTTTCCGTTACTGAATTACAGCCGCAACTCCTACATGGGGCGATTGATTAATCGCACCCTGACGCGCCACAGTGAGTTAAGTTTCAGCACCTTTTTTGTCTCTTCGATGAGCGAGCTTTTAAAGCAGGTTGCCCTCGACGGCTGTGGGATTGCCTGGCTGCCGGAGTACGCCATCCAACAAGAAATTCGCAGCGGGAAGCTCGTTGTACTGAATCGGGACGAACTGGTGATCCCGATTCAGGCCTATGCATACCGGATGAATACCCGCATGAATCCCGTTGCCGAACGCTTCTGGCGTGAACTGCGCGAGCTGGAGATTGTGCTTAGCTGA", - 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"GI:16132149" - ], - [ - "gene_synonym", - "ECK4319" - ], - [ - "gene_synonym", - "EcoGene:EG12567" - ], - [ - "gene_synonym", - "iadA" - ], - [ - "gene_synonym", - "yjiF" - ] - ], - "dna_sequence": "ATGATTGATTATACCGCAGCCGGTTTTACCCTGCTGCAGGGAGCGCATTTGTATGCGCCGGAAGATCGGGGAATTTGCGATGTCCTCGTCGCTAACGGCAAAATTATCGCCGTTGCCAGCAATATCCCTTCTGACATTGTACCGAACTGCACGGTTGTCGATCTCAGTGGGCAGATCCTCTGCCCAGGTTTTATTGATCAACACGTCCATTTGATTGGCGGTGGCGGCGAAGCAGGTCCCACGACGCGCACGCCGGAAGTGGCGCTAAGTCGCCTGACGGAAGCGGGCGTCACGTCAGTGGTTGGTCTGCTGGGCACCGACTCTATCTCTCGCCACCCGGAATCCCTGCTCGCCAAGACCCGTGCGCTCAATGAAGAAGGCATCAGCGCCTGGATGCTGACCGGCGCTTATCATGTCCCTTCCCGCACCATTACGGGTTCCGTGGAAAAAGACGTGGCGATTATCGATCGTGTGATTGGCGTGAAATGCGCCATCTCTGATCACCGTTCTGCCGCACCGGACGTTTATCACCTGGCCAATATGGCGGCAGAATCCCGCGTTGGCGGTTTGCTCGGCGGTAAACCTGGCGTCACCGTGTTCCACATGGGCGACAGTAAAAAGGCGTTACAGCCTATTTATGACCTGCTGGAAAACTGCGATGTGCCGATCAGCAAGCTGCTGCCGACCCACGTTAACCGCAACGTACCGTTGTTTGAGCAGGCGCTGGAGTTCGCGCGCAAAGGCGGCACCATCGATATCACCAGCAGCATTGACGAACCGGTCGCCCCTGCCGAAGGTATTGCCCGCGCCGTTCAGGCGGGTATTCCGCTGGCACGCGTCACCCTCAGCTCCGACGGCAACGGTAGCCAGCCGTTCTTCGATGACGAAGGGAATTTAACCCATATCGGTGTTGCCGGTTTTGAAACGTTGCTGGAAACCGTGCAGGTGCTGGTCAAAGACTATGATTTCAGTATCAGCGATGCCCTGCGCCCGCTCACCAGTAGCGTAGCCGGTTTCCTTAACCTGACCGGGAAAGGCGAAATTCTGCCAGGCAATGATGCTGACTTGCTGGTCATGACGCCAGAACTGCGCATTGAGCAGGTATACGCTCGCGGCAAACTGATGGTCAAAGACGGCAAAGCCTGCGTGAAAGGAACGTTTGAAACGGCTTAA", - 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"protein_translation_length": 153, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4330" - ], - [ - "gene_synonym", - "NP_418750.2" - ], - [ - "gene_synonym", - "ASAP:ABE-0014201" - ], - [ - "gene_synonym", - "JW5783" - ], - [ - "gene_synonym", - "yjiH" - ], - [ - "gene_synonym", - "GI:90111731" - ], - [ - "gene_synonym", - "GeneID:948856" - ], - [ - "gene_synonym", - "ECK4321" - ], - [ - "gene_synonym", - "EcoGene:EG12569" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39379" - ] - ], - "dna_sequence": "ATGACACAACAAGGGGATGCTGTAGCCGGGGAGCTGGCGACAGAAAAAGTGGGCATTAAAGGGTATCTGGCCTTTTTTCTCACCATAATCTTTTTTTCCGGTGTTTTTTCCGGAACAGACAGCTGGTGGCGCGTTTTTGATTTTTCCGTTCTGAACGGATCGTTTGGGCAACTGCCTGGTGCGAACGGAGCCACCACCTCATTTCGCGGCGCGGGTGGCGCGGGGGCTAAAGATGGCTTTCTCTTTGCGCTGGAGCTGGCACCGTCAGTCATTCTCTCTCTGGGGATTATTTCAATTACCGATGGTCTTGGTGGATTACGCGCCGCGCAGCAGTTAATGACACCTGTGCTAAAACCGTTGTTGGGCATTCCAGGGATCTGCTCGCTGGCGCTGATCGCTAACCTGCAAAACACCGATGCCGCCGCCGGTATGACCAAAGAGCTGGCGCAGGAAGGTGAAATTACCGAACGCGATAAAGTGATTTTCGCCGCATATCAAACCAGCGGTAGCGCCATCATCACCAACTACTTCTCTTCCGGCGTCGCGGTGTTTGCCTTTCTGGGCACGTCCGTAATCGTACCTTTAGCCGTCATCCTGGTGTTTAAATTTGTCGGAGCCAACATTTTGCGCGTCTGGCTTAACTTCGAAGAACGTCGCAACCCAACGCAAGGAGCGCAAGCATGA", - 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"putative ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase" - ], - "id": "CDS_4253", - "location": [ - [ - "NC_000913", - 4564689, - "-", - 768 - ] - ], - "md5": "cbde51231545aee1cbaadbb750df1097", - "parent_gene": "", - "protein_md5": "559d4e2d107e812e6db53ee5018b3516", - "protein_translation": "MAYSIGIDSGSTATKGILLADGVITRRFLVPTPFRPATAITEAWETLREGLETTPFLTLTGYGRQLVDFADKQVTEISCHGLGARFLAPATRAVIDIGGQDSKVIQLDDDGNLCDFLMNDKCAAGTGRFLEVISRTLGTSVEQLDSITENVTPHAITSMCTVFAESEAISLRSAGVAPEAILAGVINAMARRSANFIARLSCEAPILFTGGVSHCQKFARMLESHLRMPVNTHPDAQFAGAIGAAVIGQRVRTRR", - "protein_translation_length": 255, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418755.4" - ], - [ - "gene_synonym", - "b4335" - ], - [ - "gene_synonym", - "GeneID:945789" - ], - [ - "gene_synonym", - "ASAP:ABE-0014214" - ], - [ - "gene_synonym", - "GI:90111735" - ], - [ - "gene_synonym", - "EcoGene:EG12574" - ], - [ - "gene_synonym", - "yjiM" - ], - [ - "gene_synonym", - "JW5786" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39384" - ], - [ - "gene_synonym", - "ECK4326" - ] - ], - "dna_sequence": "ATGTCACTTGTCACCGATCTACCCGCCATTTTCGATCAGTTCTCTGAAGCTCGCCAGACAGGCTTTCTCACCGTCATGGATCTCAAGGAGCGCGGCATTCCGCTGGTTGGCACTTACTGCACCTTTATGCCGCAAGAGATCCCGATGGCAGCCGGTGCGGTTGTGGTTTCGCTCTGTTCCACCTCTGATGAAACCATTGAAGAAGCGGAGAAAGATCTGCCGCGCAACCTCTGCCCGCTGATTAAAAGCAGCTACGGCTTCGGCAAAACCGATAAATGCCCCTACTTCTACTTTTCGGATCTGGTGGTCGGTGAAACCACCTGCGACGGCAAAAAGAAAATGTATGAATACATGGCGGAGTTTAAGCCTGTTCATGTGATGCAATTGCCCAACAGCGTTAAGGACGATGCCTCGCGTGCGTTATGGAAAGCCGAGATGCTGCGCTTGCAAAAAACGGTAGAAGAACGTTTTGGGCACGAGATTAGCGAAGATGCTCTGCGCGATGCCATTGCGCTGAAAAACCGCGAACGTCGCGCACTGGCTAATTTTTATCATCTTGGGCAGTTAAATCCTCCGGCGCTTAGCGGCAGCGACATTCTGAAAGTGGTTTACGGCGCAACCTTCCGGTTCGATAAAGAGGCGTTGATCAATGAACTGGATGCAATGACCGCCCGCGTTCGTCAGCAGTGGGAAGAAGGCCAGCGACTGGACCCGCGTCCGCGCATTTTAATCACCGGCTGCCCGATTGGCGGCGCAGCAGAAAAAGTGGTGCGCGCGATTGAAGAGAATGGCGGCTGGGTTGTCGGTTATGAAAACTGCACCGGGGCGAAAGCGACCGAGCAATGCGTGGCAGAAACGGGCGATGTCTACGACGCGCTGGCGGATAAATATCTGGCGATTGGCTGCTCCTGTGTTTCGCCGAACGATCAGCGCCTGAAAATGCTCAGCCAGATGGTGGAGGAATATCAGGTCGATGGCGTAGTTGATGTGATTTTGCAGGCGTGCCATACCTACGCGGTGGAATCGCTGGCGATTAAACGTCATGTGCGCCAGCAGCACAACATTCCTTATATCGCTATTGAAACAGACTACTCCACCTCGGATGTCGGGCAGCTCAGTACCCGTGTCGCGGCCTTTATTGAGATGCTGTAA", - 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], - [ - "gene_synonym", - "JW4299" - ], - [ - "gene_synonym", - "yjiN" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39385" - ], - [ - "gene_synonym", - "ECK4327" - ], - [ - "gene_synonym", - "GI:16132157" - ] - ], - "dna_sequence": "ATGAATAAACTCATCGAACTCAGACGCGCCAAAAGGTTGGCGCTCTCTTTACTGCTTATCGCCGCTGCTACCTTTGTCGTTACGCTGTTTTTGCCGCCCAATTTTTGGGTGAGCGGCGTGAAGGCGATTGCTGAAGCGGCGATGGTCGGCGCGCTGGCGGACTGGTTTGCGGTGGTGGCGCTGTTTCGCCGCGTGCCGATTCCGATCATTTCTCGCCATACGGCGATTATCCCGCGTAATAAAGACCGGATTGGCGAAAATCTCGGCCAGTTCGTGCAGGAAAAATTTCTTGATACTCAATCCCTGGTGGCATTGATTCGACGCCACGAACCGGCGTTGCTGATTGGCAACTGGTTTAGCCAGCCAGAAAACGCCCGCCGCGTTGGTCAGCATCTGTTGCAGATCATGAGCGGTTTTCTCGAACTTACCGATGATGCGCGTATTCAGCGCCTGCTTAAGCGCGCGGTCCATCGGGCGATTGATAAGGTCGATCTTTCCGGCACCAGTGCGTTGATGCTGGAGAGTATGACCAAAAACGATCGTCATCAGGTGCTGCTGGATACGCTGATCGCACAGTTGATCGCCCTTCTCCAGCGCGATAAATCGCGCAAGTTTATCGCCCAGCAAATTGTTCGCTGGCTGGAGAGCGAGCATCCACTGAAAGCCAAAATTCTCCCCACCGAATGGTTGGGCGAACATAGCGCGGAGTTGGTTTCTGACGCGGTGAATTCTTTGCTTGATGATATTAGTCGCGATCGTGCGCATCAGATCCGCCATGCGTTTGATCGCGCCACCTTCGCCCTGATCGACAAGCTGAAAAACGATCCGGAAATGGCAGCGCGAGCCGATGCCGTAAAAAGCTATCTGAAAGAAGATGAAGCTTTTAATCGCTATCTCAGTGAATTGTGGGGGGATTTACGGGAATGGCTGAAAGTGGATATCAACAGTGAAGATTCTCGTGTGAAAGAACGCATCGCACGAGCGGGTCAATGGTTTGGCGAAACGTTAATTGCCGATGATGCCTTGCGGGCGTCGTTAAATGGTCATCTTGAACAAGCCGCGCACCGCGTCGCGCCTGAGTTTTCCGCATTCCTGACGCGCCACATCAGCGATACGGTAAAAAGCTGGGATGCGCGGGATATGTCGCGGCAAATAGAGTTAAATATCGGCAAAGATCTGCAGTTTATTCGTGTCAACGGTACGCTGGTTGGCGGTTGTATTGGGCTAATTTTATATTTGCTGTCGCAGCTCCCGGCCTTGTTCCCCCTCGGCAATTTTTAG", - 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], - [ - "gene_synonym", - "EcoGene:EG12576" - ], - [ - "gene_synonym", - "GI:16132158" - ], - [ - "gene_synonym", - "ECK4328" - ], - [ - "gene_synonym", - "yjiO" - ], - [ - "gene_synonym", - "NP_418757.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39386" - ], - [ - "gene_synonym", - "mdtM" - ] - ], - "dna_sequence": "ATGCCACGTTTTTTTACCCGCCATGCCGCCACGCTGTTTTTCCCGATGGCGTTGATTTTGTATGACTTTGCTGCGTATCTGTCGACGGATCTGATCCAGCCTGGGATCATTAATGTGGTACGTGATTTTAATGCCGATGTCAGTCTGGCCCCTGCTGCCGTCAGTCTCTATCTTGCTGGCGGTATGGCGTTACAGTGGCTGCTGGGGCCGCTTTCCGACAGAATTGGCCGCAGGCCGGTGCTGATTACCGGGGCGCTAATTTTTACCCTTGCCTGCGCCGCGACAATGTTCACAACGTCTATGACACAGTTTCTTATCGCGCGTGCAATTCAGGGCACCAGTATCTGTTTTATTGCCACCGTTGGTTATGTCACGGTGCAGGAGGCGTTCGGACAGACAAAAGGGATCAAGTTGATGGCGATTATCACCTCCATCGTACTGATTGCGCCGATTATCGGCCCGCTTTCCGGCGCAGCTCTGATGCACTTTATGCACTGGAAAGTCCTTTTTGCCATCATTGCGGTTATGGGTTTTATCTCATTTGTTGGCTTACTGTTGGCGATGCCAGAGACGGTGAAGCGCGGCGCGGTTCCGTTTAGCGCCAAAAGCGTCTTGCGCGATTTTCGTAATGTCTTTTGCAATCGGCTGTTCCTCTTTGGCGCAGCAACCATCTCTTTAAGCTATATCCCGATGATGAGCTGGGTGGCTGTCTCGCCGGTGATCCTTATCGATGCAGGCAGCTTAACAACTTCGCAGTTCGCCTGGACACAGGTTCCGGTGTTCGGCGCGGTGATTGTTGCGAATGCCATCGTGGCGCGTTTTGTTAAAGATCCGACCGAACCGCGGTTTATCTGGCGTGCCGTACCCATTCAACTGGTCGGCCTCTCGCTGTTGATTGTCGGCAATCTGCTGTCGCCGCACGTCTGGCTGTGGTCGGTGCTGGGCACCAGTCTGTATGCTTTCGGGATTGGTTTGATTTTCCCGACCTTATTCCGCTTTACGCTGTTTTCCAATAAGTTACCGAAAGGGACCGTCTCCGCATCGCTAAATATGGTGATCCTGATGGTGATGTCGGTCTCGGTCGAAATCGGCCGCTGGCTATGGTTTAACGGCGGTCGCTTGCCGTTTCATCTGTTAGCCGTTGTGGCGGGCGTTATCGTCGTTTTCACCCTGGCGGGATTGCTCAATCGCGTGCGCCAGCATCAGGCAGCCGAGCTAGTGGAGGAGCAGTGA", - "dna_sequence_length": 1233, - "functions": [ - "multidrug efflux system protein" - ], - "id": "CDS_4256", - "location": [ - [ - "NC_000913", - 4568519, - "-", - 1233 - ] - ], - "md5": "43bad8ad7bc80a6a9647c8d24eff8370", - "parent_gene": "", - "protein_md5": "668bc781042fc4e56f0d15fa7a269af5", - "protein_translation": "MPRFFTRHAATLFFPMALILYDFAAYLSTDLIQPGIINVVRDFNADVSLAPAAVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATMFTTSMTQFLIARAIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLIAPIIGPLSGAALMHFMHWKVLFAIIAVMGFISFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFCNRLFLFGAATISLSYIPMMSWVAVSPVILIDAGSLTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLSLLIVGNLLSPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNKLPKGTVSASLNMVILMVMSVSVEIGRWLWFNGGRLPFHLLAVVAGVIVVFTLAGLLNRVRQHQAAELVEEQ", - "protein_translation_length": 410, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "GeneID:948866" - ], - [ - "gene_synonym", - "b4339" - ], - [ - "gene_synonym", - "yjiP" - ], - [ - "gene_synonym", - "yjiQ" - ], - [ - "gene_synonym", - "EcoGene:EG12577" - ], - [ - "gene_synonym", - "ECK4329" - ], - [ - "gene_synonym", - "JW5953" - ], - [ - "gene_synonym", - "ASAP:ABE-0014227" - ], - [ - "gene_synonym", - "ASAP:ABE-0014229" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39387" - ] - ], - "dna_sequence": "ATGACAAACTTCACGACCAGCACGCCGCATGATGCATTATTTAAAACCTTTCTCACGCACCCTGACACTGCGCGGGATTTTATGGAGATTCACTTACCTAAAGATTTACGTGAACTGTGCGATCTCGATAGCTTAAAACTGGAATCCGCCAGCTTTGTCGATGAAAAATTGCGGGCGCTACACTCCGATATTTTATGGTCGGTAAAGACCCGCGAAGGCGATGGCTATATCTATGTGGTGATTGAACATCAGAGCCGCGAGGACATTCATATGGCCTTTCGCCTGATGCGCTATTCCATGGCGGTGATGTAGCGCCATATAGAGCATGATAAACGCCAGCCGCTACCGTTGGTCATCCCGATGCTATTTTATCACGGTAGCCGTAGTCCTTACCCCTGGTCCCTGTGCTGGCTGGACGAATTTGCCGACCCGACTACCGCACGGAAGCTTTATAACGCCGCGTTCCCGCTGGTGGATGTTACTGTCGTGCCAGACGACGAGATTGTGCAGCATCGCAGAGTCGCCCTGTTGGAGTTGATCCAAAAGCATATTCGCCAGCGCGATCTGATGGGGCTTATCGATCAACTGGTAGTATTACTGGTTACAGAGTGTGCTAATGACAGCCAGATAACTGCGCTGTTAAATTACATTTTACTGACTGGCGATGAAGCGCGTTTTAATGAGTTTATCAGTGAACTTACCCGTCGAATGCCACAACACAGGGAGCGAATAATGACGATTGCAGAGCGAATTCATAATGATGGATATATAAAAGGGGAGCAGCGCATTCTTCGATTGTTGTTGCAGAATGGGGCGGATCCTGAATGGATACAAAAGATTACCGGACTTTCGGCAGAGCAAATGCAGGCATTAAGGCAGCCCTTGCCTGAGCGTGAGCGCTATTCATGGCTCAAGAGCTAA", - "dna_sequence_length": 921, - "id": "CDS_4257", - "location": [ - [ - "NC_000913", - 4568998, - "+", - 921 - ] - ], - "md5": "6cf9a211443c62c1cd503a968cb75f29", - "parent_gene": "", - "protein_md5": "73f87c27c9ac302d9f41682e2f26e6ea", - "protein_translation": "MTNFTTSTPHDALFKTFLTHPDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRALHSDILWSVKTREGDGYIYVVIEHQSREDIHMAFRLMRYSMAVM", - "protein_translation_length": 103, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "b4340" - ], - [ - "gene_synonym", - "ECK4331" - ], - [ - "gene_synonym", - "yjiR" - ], - [ - "gene_synonym", - "NP_418760.1" - ], - [ - "gene_synonym", - "GeneID:949089" - ], - [ - "gene_synonym", - "JW4303" - ], - [ - "gene_synonym", - "ASAP:ABE-0014232" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39389" - ], - [ - "gene_synonym", - "GI:16132161" - ], - [ - "gene_synonym", - "EcoGene:EG12579" - ] - ], - "dna_sequence": "ATGACGCGTTATCAACATCTGGCGACTCTGCTTGCCGAACGGATTGAGCAAGGGCTGTATCGTCACGGGGAGAAATTGCCGTCGGTGCGCAGCTTAAGTCAGGAGCACGGCGTCAGTATCAGCACCGTGCAGCAGGCGTATCAGACGCTGGAGACGATGAAGCTCATCACTCCGCAGCCGCGTTCGGGTTATTTTGTCGCACAACGTAAAGCCCAGCCGCCAGTACCGCCGATGACGCGTCCGGTGCAGCGCCCGGTGGAAATTACCCAGTGGGATCAGGTGCTGGATATGCTGGAGGCGCATAGCGACAGTTCCATTGTTCCGTTAAGCAAAAGCACACCGGATGTCGAAGCGCCCAGCCTGAAACCGCTGTGGCGGGAGCTAAGCCGGGTGGTGCAGCATAATCTGCAAACCGTTCTCGGTTATGACTTGTTAGCCGGTCAGCGAGTATTGCGAGAGCAGATTGCCCGCCTGATGCTCGACAGCGGCTCGGTGGTCACCGCCGATGACATCATCATCACCAGCGGCTGCCATAACTCGATGTCGCTGGCGTTAATGGCAGTGTGTAAACCGGGCGATATTGTCGCGGTCGAATCCCCCTGTTATTACGGTTCGATGCAGATGCTGCGCGGCATGGGCGTGAAAGTGATTGAAATCCCAACCGATCCAGAAACTGGCATCAGCGTTGAAGCGCTGGAACTGGCGCTGGAACAGTGGCCGATTAAAGGCATCATTCTGGTGCCAAACTGTAATAATCCGCTGGGATTTATTATGCCGGACGCGCGCAAACGGGCCGTTCTCTCTCTCGCTCAGCGTCATGATATTGTGATTTTTGAAGATGATGTCTATGGCGAACTGGCGACGGAGTATCCGCGCCCGCGGACCATTCATTCCTGGGATATCGACGGGCGAGTGCTGTTGTGCAGCTCGTTCAGTAAAAGTATTGCACCAGGCCTGCGCGTGGGTTGGGTCGCACCGGGGCGTTATCACGATAAACTGATGCATATGAAATACGCCATCAGCAGCTTTAATGTGCCGTCCACGCAAATGGCGGCGGCAACGTTTGTGCTGGAAGGTCACTATCATCGCCATATCCGGCGGATGCGGCAGATCTATCAGCGCAATTTGGCGCTTTATACCTGCTGGATACGGGAATATTTTCCCTGCGAAATCTGTATTACGCGCCCGAAAGGCGGATTTTTACTGTGGATAGAATTGCCTGAACAGGTCGATATGGTCTGCGTCGCGCGGCAGCTGTGCCGCATGAAAATCCAGGTGGCGGCAGGCTCGATTTTCTCAGCTTCCGGCAAATACCGTAATTGTCTGCGCATCAACTGCGCTTTGCCGCTCAGCGAAACCTATCGCGAAGCACTGAAGCAAATTGGCGAGGCCGTGTATCGGGCAATGGAATAA", - 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"UniProtKB/Swiss-Prot:P39390" - ], - [ - "gene_synonym", - "ASAP:ABE-0014236" - ], - [ - "gene_synonym", - "yjiS" - ], - [ - "gene_synonym", - "NP_418761.1" - ], - [ - "gene_synonym", - "GeneID:948903" - ], - [ - "gene_synonym", - "EcoGene:EG12580" - ], - [ - "gene_synonym", - "JW4304" - ], - [ - "gene_synonym", - "GI:16132162" - ] - ], - "dna_sequence": "ATGGAATTTCACGAAAACAGAGCTAAAGCGCCGTTTATCGGCCTGGTGCAACTCTGGCAGGCGGTGAGGCGTTGGCGGCGGCAAATGCAGACCCGACGCGTGTTACAGCAGATGAGTGATGAGCGGTTGAAGGATATCGGGTTACGCAGGGAGGATGTGGAGTGA", - "dna_sequence_length": 165, - "functions": [ - "DUF1127 family protein" - ], - "id": "CDS_4259", - "location": [ - [ - "NC_000913", - 4571751, - "+", - 165 - ] - ], - "md5": "73bc31bbf6bcffb444613406990c21e4", - "parent_gene": "", - "protein_md5": "3d9de68baafc0d21f6e70e9890af0763", - "protein_translation": "MEFHENRAKAPFIGLVQLWQAVRRWRRQMQTRRVLQQMSDERLKDIGLRREDVE", - "protein_translation_length": 54, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39391" - ], - [ - "gene_synonym", - "ECK4333" - ], - [ - "gene_synonym", - "b4342" - ], - [ - "gene_synonym", - "ASAP:ABE-0014239" - ], - [ - "gene_synonym", - "yjiT" - ], - [ - "gene_synonym", - "EcoGene:EG12581" - ], - [ - "gene_synonym", - "GeneID:945056" - ], - [ - "gene_synonym", - "JW5787" - ] - ], - "dna_sequence": "TTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACTTTGTGAATCTTAGAGGGTTGAGACAACCGGATGGCCGTCCTCTTTATGAATATCATGCAACCAATGATGAATATACCCAATTAACGCAGCTACTCCGTGCAGTCGGTCAATCACAATCTAATATATGTAATAGGGACTTTGCTGCCTGTTTTGTTCTTTTTTGCTCTGAGTGGTACCGCAGGGATTATGAACGGCAATGCGGATGGACGTGGGACCCTATATATAAAAAAATAGGGATTTCATTCACCGCCACAGAGCTTGGTACTATCGTACCGAAAGGGATGGAAGATTACTGGCTGCGCCCAATTCGATTTTATGAATCTGAACGACGCAATTTTCTCGGAACATTATTCAGTGAAGGTGGTTTACCTTTCCGGCTACTCAAAGAATCAGACAGTCGCTTTCTGGCTGTTTTCTCCAGGATCCTTGGACAATATGAGCAAGCAAAGCAGTCAGGTTTTTCTGCCCTTTCGCTGGCAAGAGCTGTCATAGAAAAATCAGCGCTGCCAACTGTTTTTAGCGAAGATACCTCTGTAGAACTTATCAGTCATATGGCTGATAACCTCAATTCCTTAGTACTTACTCACAACCTAATAAATCACAAAGAACCAGTACAACAGCTTGAGAAGGTTCACCCTACCTGGCGAAGCGAGTTTCCAATACCGTTAGATGATGAAACAGGAACGCATTTTTTGAATGGACTGCTATGCGCAGCCTCTGTAGAGGCTAAGCCTCGACTACAAAAAAATAAGAGTACGCGTTGCCAATTCTATTGGTCAGAAAAGCATCCAGATGAGCTTAGGGTGATAGTATCTCTTCCGGACGAAGTTTCCTTTCCTGTAACAAGCGAGCCGTCAACTACGCGCTTTGAACTTGCCATTTGTGAAGATGGTGAGGAAGTCTCTGGCCTTGGGCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTTGGGAGCATTAAACTTGATGACAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGATTGTGCTCCCTCGGGATAATAGCAATGTTGCTGGTTTTGATGGCCAATCGAGGGCAGTAAACGTATTAGGACTAAAAGCACTACCTGTGAAGGGATGTCAGGACGTTACAGTTACAGCAAATGAAACTTATCGGATTCGCACCGGAAGAGAACAAATCAGCATCGGAAGGTTTGCTCTAAATGGAAAGCGTGCAAGCTGGGTTTGTCATCCAGATGAAACATTTATTGGTGTACCAAAAGTCATTTCTACACTACCGGATATTCAAAGCATTGATGTAACG", - 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"ASAP:ABE-0174119" - ], - [ - "gene_synonym", - "yjiV" - ], - [ - "gene_synonym", - "yjiU" - ], - [ - "gene_synonym", - "ECK4467" - ], - [ - "gene_synonym", - "EcoGene:EG12583" - ], - [ - "gene_synonym", - "mcrD" - ] - ], - "dna_sequence": "TTACACGTGCTGACAAAACAGCATTACAGCCAGCAGGAAGTACTGCGTTGGATCGATGTCTGTTCAGGGACTCAACCTAATGCAAAGGATCCCGCATTTCTTAAAGTCAGGGCGCATATCTTCCAGCGTAATACCTAGGGAATATGGGCTTGTGTTGATAAAGATTGCAGATTAAAGCACGGTACACCGCTCGACAAAGGCTGGCCCTTTGGCTATGTGTATGTGAACCAGCGACAAAATTGTGACTGTGGAAGCCCTGTATACGAAGTTGCATTCTGTAATGATTGTAATGAGCCTCATCTTCTGGCACGGGACAAAAAGGGCAAACTAGTCCAGTGGGAAAATAAAGGTGGCGATGAATTCTCTTTGCAGGATGAAGTACCTGTTGAACATGACGCTACAGAAGAAAAAGTCGAAAAAGAGAACAGTTTTCAGCCTCCGTTGATTATTGCCGCAGGAGAGACCAGCGAGGCAGGTTATACCCTACAACGCCTCGACCGTCAGACGCGCCGTATTGGCGTTATTAACAATGACAGCATTCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGTGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGAGGGCGTCGGACCAGATTCGTTGCCAGGACGAGGTCGTCGACTCATCACCTTTACAGACAGTCGACAAGGGACAGCCCGAATGGCGGTGCGTATGCAGCAAGAAGCAGAACGCAGTCGCTTACGCGGAAGCGTAGTCGAAATTCTCAGCTGGCATCAAAGGACGCAAACGTCTACAGCGCCGAATGCCAATGCCGATCTGGAAAAATTAGCGGCCAGGGCGAAGCAAGCCCGTGAGCAGGCAGAAGAATATCGAAGCTGGGGAATGCCAGACCAGGCGAAATTGTCACAAGCACAGGCTGAACAGCTTGAACAGGCTTATCAGGCTGCAACCGGTGGGAAAGCCGCGACTATCCTGGTATCCCGAACCTGGACGGAGATGGTTAACGAGCTTAAAGAGAGAGCCGATATCCGCGGGCCGGTTCTGCAATATAACCATTATCTTAAGCCTGAAGTGTTTAATGAAAACGGCGGCCCCCTTAAGCTTTCTGAAATGTTGTTGTTCCGGGAATTCATGCGTCGCCCTAAACGGACTAACAGCCTGGAAACACAGGGGCTGGTTCAGGTTGGTTACCAGGGGCTGGAGAAAATACATAAGAGCCCCTTGCACTGGCAGGAAAAAGGATTAACGCTGGATGACTGGCGCGATTTTCTCAAGGTTACGTTGGATCATTACGTTCGCGAGAGCAACTTCACACAGCTGGATGATGAGCTGAAAAACTGGATTGGTAGCCGTTTTTCATCAAAATTCGTCCGTAACCCGGAATCAAAAGATCCTGAAGATAATCAGAACAGACGCTGGCCTCAAATTCGTAATGGCAACGTATCCCATCGTTTAGCGAAGTTGCTGATGCTGGGGGCTGGATTCAAAACCGTCAATGCGGCAACTATTGATATTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTATCTGCCTACCCATATTTCGTTCGAGCATCTTACCCTGGCGCAATATGACACTTTTGTCGCGCAGAAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCGATCGCGTGATGACGCTGGCCTCTCGCAGCCAGCAGGCAACGATTCCGGGGCCGGAGTGGCACCTGAATGACGAACTGGTGGTGCGTAGTCTCGGTTATAAAACGGTAGAACTGAACGAGTTTATTCTGCCGGCTAAAGCCACCAACGCTGTCGAGCGGGTCAAAGACATTCAGATCCACAAACAGTTGAATGGACCACTGTCGCAGTTTGGGCAACGCTTCTGGGACGTGCTGTTTAACGACCATGAAGAAGCGCAGTCACTGATGAATAACACGCGAATTACCGGCGTTCACTATACCGATCGCTATCTGCAAAACCCGGTTGCGCTGGCGTTGTTGGGATCAATTCTGAGACCGCTAAAAACAAAGCTGACCGATGGCGCTGAAGTGACGCTGGATACGCTATTTAAAGATAAAGATCGCCCCGGTAACCGGCCTTTCCATGACTGGATGAGCATAGCGGATTTTCAGGATTTCGCTGATCAGTGGTTTGCTGCTGCGCTGGGCAGGCCGGTAGAACTGACGGTGTTCGACTCGCCGCGCGATATCCCTCACCATCGTAAACTGACGGTGACTTTTGAGGATGGTCAGGTATTGAAGATCCGCTTCGATCAGGGGATGGGCTACTGGCGCATCAACTTTTCATCGCAATGGCATTACTTTGATTTCCGCGATGACGTTTCTTTCCAGTTAGTCAAAATGGCTCAGGCCTGCAAGGAAGGGAATGTCGCCAACAGCGAAGAGAGTTGGGCAACGGATGTGCTGGTGGAGGTGATCGCCTCCTGA", - 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"JW5871" - ], - [ - "gene_synonym", - "ASAP:ABE-0014250" - ], - [ - "gene_synonym", - "NP_418766.4" - ], - [ - "gene_synonym", - "rglB" - ], - [ - "gene_synonym", - "mcrB" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P15005" - ] - ], - "dna_sequence": "ATGGAATCTATTCAACCCTGGATTGAAAAATTTATTAAGCAAGCACAGCAACAACGTTCGCAATCCACTAAAGATTATCCAACGTCTTACCGTAACCTGCGAGTAAAATTGAGTTTCGGTTATGGTAATTTTACGTCTATTCCCTGGTTTGCATTTCTTGGAGAAGGTCAGGAAGCTTCTAACGGTATATATCCCGTTATTCTCTATTATAAAGATTTTGATGAGTTGGTTTTGGCTTATGGTATAAGCGACACGAATGAACCACATGCCCAATGGCAGTTCTCTTCAGACATACCTAAAACAATCGCAGAGTATTTTCAGGCAACTTCGGGTGTATATCCTAAAAAATACGGACAGTCCTATTACGCCTGTTCCCAAAAAGTCTCACAGGGTATTGATTACACCCGATTTGCCTCTATGCTGGACAACATAATCAACGACTATAAATTAATATTTAATTCTGGCAAGAGTGTTATTCCACCTATGTCAAAAACTGAATCATACTGTCTGGAAGATGCGTTAAATGATTTGTTTATCCCTGAAACCACAATAGAGACGATACTCAAACGATTAACCATCAAAAAAAATATTATCCTCCAGGGGCCGCCCGGCGTTGGAAAAACCTTTGTTGCACGCCGTCTGGCTTACTTGCTGACAGGAGAAAAGGCTCCGCAACGCGTCAATATGGTTCAGTTCCATCAATCTTATAGCTATGAGGATTTTATACAGGGCTATCGTCCGAATGGCGTCGGCTTCCGACGTAAAGACGGCATATTTTACAATTTTTGTCAGCAAGCTAAAGAGCAGCCAGAGAAAAAGTATATTTTTATTATAGATGAAATCAATCGTGCCAATCTCAGTAAAGTATTTGGCGAAGTGATGATGTTAATGGAACATGATAAACGAGGTGAAAACTGGTCTGTTCCCCTAACCTACTCCGAAAACGATGAAGAACGATTCTATGTCCCGGAGAATGTTTATATCATCGGTTTAATGAATACTGCCGATCGCTCTCTGGCCGTTGTTGACTATGCCCTACGCAGACGATTTTCTTTCATAGATATTGAGCCAGGTTTTGATACACCACAGTTCCGGAATTTTTTACTGAATAAAAAAGCAGAACCTTCATTTGTTGAGTCTTTATGCCAAAAAATGAACGAGTTGAACCAGGAAATCAGCAAAGAGGCCACTATCCTTGGGAAAGGATTCCGCATTGGGCATAGTTACTTCTGCTGTGGGTTGGAAGATGGCACCTCTCCGGATACGCAATGGCTTAATGAAATTGTGATGACGGATATCGCCCCTTTACTCGAAGAATATTTCTTTGATGACCCCTATAAACAACAGAAATGGACCAACAAATTATTAGGGGACTCATAG", - 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], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39394" - ], - [ - "gene_synonym", - "dinL" - ], - [ - "gene_synonym", - "yjiW" - ], - [ - "gene_synonym", - "ASAP:ABE-0014253" - ], - [ - "gene_synonym", - "NP_418767.4" - ], - [ - "gene_synonym", - "EcoGene:EG12584" - ], - [ - "gene_synonym", - "sosC" - ], - [ - "gene_synonym", - "JW4310" - ], - [ - "gene_synonym", - "GeneID:949088" - ], - [ - "gene_synonym", - "GI:145698346" - ] - ], - "dna_sequence": "ATGACTGACACGCATTCTATTGCACAACCGTTCGAAGCAGAAGTCTCCCCGGCAAATAACCGTCATGTCACCGTCGGTTATGCGAGTCGCTACCCGGATTACAGCCGTATTCCCGCCATCACCCTGAAAGGTCAGTGGCTGGAAGCCGCCGGTTTTGCCACTGGCACGGCGGTAGATGTCAAAGTGATGGAAGGCTGTATTGTCCTCACCGCCCAACCACCCGCCGCCGAGGAGAGCGAACTGATGCAGTCGCTACGCCAGGTGTGCAAACTGTCGGCGCGTAAACAAAAGCAGGTGCAGGCGTTTATTGGAGTGATTGCCGGTAAACAGAAAGTCGCGTAA", - "dna_sequence_length": 342, - "functions": [ - "toxic peptide regulated by antisense sRNA symR" - ], - "id": "CDS_4264", - "location": [ - [ - "NC_000913", - 4579840, - "-", - 342 - ] - ], - "md5": "9bb65cb60a4985c5bda9bd785108143a", - 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"gene_synonym", - "hsm" - ], - [ - "gene_synonym", - "hsp" - ], - [ - "gene_synonym", - "GeneID:948872" - ], - [ - "gene_synonym", - "NP_418769.1" - ], - [ - "gene_synonym", - "JW4312" - ], - [ - "gene_synonym", - "ASAP:ABE-0014260" - ], - [ - "gene_synonym", - "ECK4339" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08957" - ], - [ - "gene_synonym", - "GI:16132170" - ] - ], - "dna_sequence": "ATGAACAATAACGATCTGGTCGCGAAGCTGTGGAAGCTGTGCGACAACCTGCGCGATGGCGGCGTTTCCTATCAAAACTACGTCAATGAACTCGCCTCGCTGCTGTTTTTGAAAATGTGTAAAGAGACCGGTCAGGAAGCGGAATACCTGCCGGAAGGTTACCGCTGGGATGACCTGAAATCCCGCATCGGCCAGGAGCAGTTGCAGTTCTACCGAAAAATGCTCGTGCATTTAGGCGAAGATGACAAAAAGCTGGTACAGGCAGTTTTTCATAATGTTAGTACCACCATCACCGAGCCGAAACAAATAACCGCACTGGTCAGCAATATGGATTCGCTGGACTGGTACAACGGCGCGCACGGTAAGTCGCGCGATGACTTCGGCGATATGTACGAAGGGCTGTTGCAGAAGAACGCGAATGAAACCAAGTCTGGTGCAGGCCAGTACTTCACCCCGCGTCCGCTGATTAAAACCATTATTCATCTGCTGAAACCGCAGCCGCGTGAAGTGGTGCAGGACCCGGCGGCAGGTACGGCGGGCTTTTTGATTGAAGCCGACCGCTATGTTAAGTCGCAAACCAATGATCTGGACGACCTTGATGGCGACACGCAGGATTTCCAGATCCACCGCGCGTTTATCGGCCTCGAACTGGTGCCCGGCACCCGTCGTCTGGCACTGATGAACTGCCTGCTGCACGATATTGAAGGCAACCTCGACCACGGCGGCGCAATCCGTCTGGGCAACACTCTGGGTAGCGACGGTGAAAACCTGCCGAAGGCGCATATTGTCGCCACTAACCCGCCGTTTGGCAGCGCCGCAGGCACCAACATTACCCGCACCTTTGTTCACCCGACCAGCAACAAACAGTTGTGCTTTATGCAGCATATTATCGAAACGCTGCATCCCGGCGGTCGTGCGGCGGTGGTGGTGCCGGATAACGTGCTGTTTGAAGGCGGCAAAGGCACCGACATTCGTCGTGACCTGATGGATAAGTGTCATCTGCACACCATTCTGCGTCTGCCGACCGGTATTTTTTACGCTCAGGGCGTGAAGACCAACGTGCTGTTCTTTACCAAAGGGACGGTGGCGAACCCGAATCAGGATAAGAACTGTACCGATGATGTGTGGGTGTATGACCTGCGTACCAATATGCCGAGTTTCGGCAAGCGCACACCGTTTACCGACGAGCATTTGCAGCCGTTTGAGCGCGTGTATGGCGAAGACCCGCACGGTTTAAGCCCGCGCACTGAAGGTGAATGGAGTTTTAACGCCGAAGAGACGGAAGTTGCCGACAGCGAAGAGAACAAAAACACCGACCAGCATCTTGCTACCAGCCGCTGGCGCAAGTTCAGCCGTGAGTGGATCCGCACCGCAAAATCCGATTCGCTGGATATCTCCTGGCTGAAAGATAAAGACAGTATTGATGCCGACAGCCTGCCGGAGCCGGATGTATTAGCGGCAGAAGCGATGGGCGAACTGGTACAGGCGCTGTCTGAACTGGATGCGCTGATGCGTGAACTGGGGGCGAGCGATGAGGCCGATTTGCAGCGTCAGTTGCTGGAAGAAGCGTTTGGTGGGGTGAAGGAATGA", - 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], - [ - "gene_synonym", - "GeneID:948878" - ], - [ - "gene_synonym", - "hsr" - ], - [ - "gene_synonym", - "NP_418770.2" - ], - [ - "gene_synonym", - "hsp" - ], - [ - "gene_synonym", - "JW4313" - ], - [ - "gene_synonym", - "GI:226524764" - ], - [ - "gene_synonym", - "hsdR" - ], - [ - "gene_synonym", - "EcoGene:EG10459" - ], - [ - "gene_synonym", - "b4350" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08956" - ] - ], - "dna_sequence": "ATGATGAATAAATCCAATTTTGAATTCCTGAAGGGCGTCAACGACTTCACTTATGCCATCGCCTGTGCGGCGGAAAATAACTACCCGGATGATCCCAACACGACGCTGATTAAAATGCGTATGTTTGGCGAAGCCACAGCGAAACATCTTGGTCTGTTACTCAACATCCCCCCTTGTGAGAATCAACACGATCTCCTGCGTGAACTCGGCAAAATCGCCTTTGTTGATGACAACATCCTCTCTGTATTTCACAAATTACGCCGCATTGGTAACCAGGCGGTGCACGAATATCATAACGATCTCAACGATGCCCAGATGTGCCTGCGACTCGGGTTCCGCCTGGCTGTCTGGTACTACCGTCTGGTCACTAAAGATTATGACTTCCCGGTGCCGGTGTTTGTGTTGCCGGAACGTGGTGAAAACCTCTATCACCAGGAAGTGCTGACGCTAAAACAACAGCTTGAACAGCAGGTGCGAGAAAAAGCGCAGACTCAGGCAGAAGTCGAAGCGCAACAGCAGAAGCTGGTTGCCCTGAACGGCTATATCGCCATTCTGGAAGGCAAACAGCAGGAAACCGAAGCGCAAACCCAGGCTCGCCTTGCGGCACTGGAAGCACAGCTCGCCGAGAAGAACGCGGAACTGGCAAAACAGACCGAACAGGAACGTAAGGCTTACCACAAAGAAATTACCGATCAGGCCATCAAGCGCACACTCAACCTTAGCGAAGAAGAGAGTCGCTTCCTGATTGATGCGCAACTGCGTAAAGCAGGCTGGCAGGCCGACAGCAAAACCCTGCGCTTCTCCAAAGGCGCACGTCCGGAACCCGGCGTCAATAAAGCCATTGCCGAATGGCCGACCGGAAAAGATGAAACGGGTAATCAGGGCTTTGCGGATTATGTGCTGTTTGTCGGCCTCAAACCCATCGCGGTGGTAGAGGCGAAACGTAACAATATCGACGTTCCCGCCAGGCTCAATGAGTCGTATCGCTACAGTAAATGTTTCGATAATGGCTTCCTGCGGGAAACCTTGCTTGAGCACTACTCACCGGATGAAGTGCATGAAGCAGTGCCAGAGTATGAAACCAGCTGGCAGGACACCAGCGGCAAACAACGGTTTAAAATCCCCTTCTGCTACTCGACCAACGGGCGCGAATACCGCGCAACAATGAAGACCAAAAGCGGCATCTGGTATCGCGACGTGCGTGATACCCGCAATATGTCGAAAGCCTTACCCGAGTGGCACCGCCCGGAAGAGCTGCTGGAAATGCTCGGCAGCGAACCGCAAAAACAGAATCAGTGGTTTGCCGATAACCCTGGCATGAGCGAGCTGGGCCTGCGTTATTATCAGGAAGATGCCGTCCGCGCGGTTGAAAAGGCAATCGTCAAGGGGCAACAAGAGATCCTGCTGGCGATGGCGACCGGTACCGGTAAAACCCGTACGGCAATCGCCATGATGTTCCGCCTGATCCAGTCCCAGCGTTTTAAACGCATTCTCTTCCTTGTCGACCGCCGTTCTCTTGGCGAACAGGCGCTGGGCGCGTTTGAAGATACGCGTATTAACGGCGACACCTTCAACAGCATTTTCGACATTAAAGGGCTGACGGATAAATTCCCGGAAGACAGCACCAAAATTCACGTTGCCACCGTACAGTCGCTGGTGAAACGCACCCTGCAATCAGATGAACCGATGCCGGTGGCCCGTTACGACTGTATCGTCGTTGACGAAGCGCATCGCGGCTATATTCTCGATAAAGAGCAGACCGAAGGCGAACTGCAGTTCCGCAGCCAGCTGGATTACGTCTCTGCCTACCGTCGCATTCTCGATCACTTCGATGCGGTAAAAATCGCTCTCACCGCCACCCCGGCGCTACATACTGTGCAGATTTTCGGCGAGCCGGTTTACCGTTATACCTACCGTACCGCGGTTATCGACGGTTTTCTGATCGACCAGGATCCGCCTATTCAGATCATCACCCGCAACGCGCAGGAGGGGGTTTATCTCTCCAAAGGCGAGCAGGTAGAGCGCATCAGCCCGCAGGGAGAAGTGATCAATGACACCCTGGAAGACGATCAGGATTTTGAAGTCGCCGACTTTAACCGTGGCCTGGTGATCCCGGCGTTTAACCGCGCCGTCTGTAACGAACTCACCAATTATCTTGACCCGACCGGATCGCAAAAAACGCTGGTCTTCTGCGTCACCAATGCCCATGCCGATATGGTGGTGGAAGAGCTGCGTGCCGCGTTCAAGAAAAAGTATCCGCAACTGGAGCACGACGCGATCATCAAGATCACCGGTGATGCCGATAAAGACGCGCGCAAAGTGCAGACCATGATCACCCGCTTCAATAAAGAGCGGCTGCCCAATATCGTGGTAACCGTCGACCTGCTGACGACCGGCGTCGATATTCCGTCGATCTGTAATATCGTGTTCCTGCGTAAAGTACGCAGCCGCATTCTGTACGAACAGATGAAAGGCCGCGCCACGCGCTTATGCCCGGAGGTGAATAAAACCAGCTTTAAGATTTTTGACTGTGTCGATATCTACAGCACGCTGGAGAGCGTCGACACCATGCGTCCGGTGGTGGTGCGCCCGAAGGTGGAACTGCAAACGCTGGTCAATGAAATTACCGATTCAGAAACCTATAAAATCACCGAAGCGGATGGCCGCAGTTTTGCCGAGCACAGCCATGAACAACTGGTGGCGAAGCTCCAGCGTATCATCGGTCTGGCCACGTTTAACCGTGACCGCAGCGAAACGATAGATAAACAGGTGCGTCGTCTGGATGAGCTATGCCAGGACGCGGCGGGCGTGAACTTTAACGGCTTCGCCTCGCGCCTGCGGGAAAAAGGGCCGCACTGGAGCGCCGAAGTCTTTAACAAACTGCCTGGCTTTATCGCCCGTCTGGAAAAGCTGAAAACGGACATCAACAACCTGAATGATGCGCCGATCTTCCTCGATATCGACGATGAAGTGGTGAGTGTAAAATCGCTGTACGGTGATTACGACACGCCGCAGGATTTCCTCGAAGCCTTTGACTCGCTGGTGCAACGTTCCCCGAACGCGCAACCGGCATTGCAGGCAGTTATTAATCGCCCGCGCGATCTCACCCGTAAAGGGCTGGTCGAGCTACAGGAGTGGTTTGACCGCCAGCACTTTGAGGAATCTTCCCTGCGCAAAGCATGGAAAGAGACGCGCAATGAAGATATCGCCGCCCGGCTGATTGGTCATATTCGCCGCGCTGCGGTGGGCGATGCGCTGAAACCGTTTGAGGAACGTGTCGATCACGCGCTGACGCGCATTAAGGGCGAAAACGACTGGAGCAGCGAGCAATTAAGCTGGCTCGATCGTTTAGCGCAGGCGCTGAAAGAGAAAGTGGTGCTCGACGACGATGTCTTCAAAACCGGCAACTTCCACCGTCGCGGCGGGAAGGCGATGCTGCAAAGAACCTTTGACGATAATCTCGATACCCTGCTGGGCAAATTCAGCGATTATATCTGGGACGAGCTGGCCTGA", - 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"protein_translation_length": 1170, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4341" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P24202" - ], - [ - "gene_synonym", - "mrr" - ], - [ - "gene_synonym", - "GI:16132172" - ], - [ - "gene_synonym", - "GeneID:948898" - ], - [ - "gene_synonym", - "JW4314" - ], - [ - "gene_synonym", - "mcrF" - ], - [ - "gene_synonym", - "b4351" - ], - [ - "gene_synonym", - "ASAP:ABE-0014271" - ], - [ - "gene_synonym", - "EcoGene:EG10612" - ], - [ - "gene_synonym", - "NP_418771.1" - ] - ], - "dna_sequence": "ATGACGGTTCCTACCTATGACAAATTTATTGAACCTGTTCTGCGTTATCTGGCAACAAAACCGGAAGGTGCAGCCGCGCGTGATGTTCATGAGGCTGCCGCGGATGCATTAGGACTGGATGACAGCCAGCGAGCGAAAGTCATTACCAGCGGACAACTTGTTTATAAAAATCGTGCAGGCTGGGCGCATGACCGTTTAAAACGTGCCGGGTTGTCGCAAAGTTTGTCGCGTGGCAAATGGTGCCTGACTCCTGCGGGTTTTGACTGGGTTGCGTCTCATCCCCAGCCAATGACGGAGCAGGAGACGAACCATCTGGCCTTCGCTTTTGTGAATGTCAAACTTAAGTCACGGCCGGATGCCGTCGATTTAGATCCGAAAGCCGACTCTCCCGATCATGAAGAACTTGCAAAGAGCAGCCCGGACGATCGGTTAGATCAGGCGCTAAAAGAGCTTCGTGATGCGGTGGCTGATGAGGTTCTGGAAAACTTATTGCAGGTTTCTCCTTCGCGCTTTGAAGTCATTGTTCTGGATGTTTTGCATCGCCTGGGGTATGGCGGCCACCGTGATGATTTGCAGCGTGTTGGCGGTACTGGAGATGGTGGCATCGATGGTGTGATATCGCTTGATAAACTTGGCCTGGAGAAAGTTTATGTTCAGGCAAAACGTTGGCAGAATACTGTAGGCAGGCCAGAATTACAGGCATTTTACGGCGCACTGGCTGGGCAAAAAGCGAAACGTGGGGTGTTTATTACCACTTCTGGATTTACTTCTCAGGCGCGTGACTTTGCCCAATCCGTCGAGGGTATGGTGTTGGTTGATGGGGAACGCCTGGTGCACTTAATGATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGA", - 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], - [ - "gene_synonym", - "b4352" - ], - [ - "gene_synonym", - "yjiA" - ], - [ - "gene_synonym", - "JW5790" - ], - [ - "gene_synonym", - "GI:90111738" - ] - ], - "dna_sequence": "ATGAACCCGATTGCAGTTACCCTACTCACCGGTTTTTTAGGCGCAGGAAAAACCACCCTGCTGCGCCATATTCTTAACGAACAGCACGGCTACAAGATTGCCGTGATTGAAAACGAATTCGGCGAAGTCTCTGTTGATGATCAACTGATTGGCGACCGCGCCACGCAGATCAAAACGCTGACCAACGGCTGCATCTGTTGTTCGCGCTCCAACGAGCTGGAGGACGCGCTACTCGACCTGCTGGACAATCTCGACAAGGGCAATATTCAGTTCGACCGTCTGGTCATTGAATGCACCGGCATGGCCGATCCCGGCCCGATTATTCAGACCTTTTTCTCCCATGAAGTTTTATGCCAGCGTTATCTGCTGGACGGCGTGATTGCGCTGGTGGATGCGGTACATGCCGATGAGCAGATGAACCAGTTCACCATCGCCCAGTCACAGGTTGGCTACGCCGACCGCATTCTGCTGACCAAAACCGACGTCGCAGGCGAAGCAGAAAAACTGCATGAACGCCTGGCGCGCATCAACGCCCGCGCACCGGTCTACACCGTCACCCACGGCGACATCGATCTGGGCCTGCTGTTCAACACCAACGGTTTTATGCTGGAAGAAAACGTCGTCAGCACCAAACCGCGTTTCCACTTTATCGCAGATAAACAAAACGATATTTCGTCGATTGTGGTGGAACTGGATTACCCGGTAGATATCAGCGAAGTTTCCCGCGTGATGGAAAACCTGCTGCTGGAGTCGGCGGATAAACTGCTACGTTACAAAGGGATGCTGTGGATTGACGGCGAACCTAACCGCCTGCTGTTCCAGGGCGTCCAGCGCCTCTACAGCGCCGACTGGGACAGGCCGTGGGGCGATGAAAAACCGCATAGCACGATGGTGTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAA", - 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], - [ - "gene_synonym", - "GI:16132174" - ], - [ - "gene_synonym", - "b4353" - ], - [ - "gene_synonym", - "ASAP:ABE-0014276" - ] - ], - "dna_sequence": "ATGTTTGGTAACTTAGGACAGGCAAAAAAATATCTCGGCCAGGCGGCGAAGATGTTGATTGGCATTCCAGACTACGACAACTACGTCGAGCATATGAAGACCAACCATCCCGACAAGCCGTACATGAGCTATGAAGAATTCTTCCGCGAACGCCAGAACGCGCGCTACGGCGGCGATGGTAAAGGCGGTATGCGCTGTTGTTAA", - "dna_sequence_length": 204, - "functions": [ - "DUF466 family protein" - ], - "id": "CDS_4270", - "location": [ - [ - "NC_000913", - 4589079, - "-", - 204 - ] - ], - "md5": "e68a318772c71c8fe96d1fc3bf5efa6b", - "parent_gene": "", - "protein_md5": "64ebf211c2df241d1e2cc73dd08a01e7", - "protein_translation": "MFGNLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSYEEFFRERQNARYGGDGKGGMRCC", - "protein_translation_length": 67, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "yjiY" - ], - [ - "gene_synonym", - "ECK4344" - ], - [ - "gene_synonym", - "oppE?" - ], - [ - "gene_synonym", - "JW5791" - ], - [ - "gene_synonym", - "EcoGene:EG12586" - 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"protein_translation_length": 716, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P02942" - ], - [ - "gene_synonym", - "ECK4345" - ], - [ - "gene_synonym", - "GeneID:948884" - ], - [ - "gene_synonym", - "EcoGene:EG11034" - ], - [ - "gene_synonym", - "ASAP:ABE-0014282" - ], - [ - "gene_synonym", - "cheD" - ], - [ - "gene_synonym", - "GI:16132176" - ], - [ - "gene_synonym", - "NP_418775.1" - ], - [ - "gene_synonym", - "tsr" - ], - [ - "gene_synonym", - "b4355" - ], - [ - "gene_synonym", - "JW4318" - ] - ], - "dna_sequence": "ATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGTTTTTGGCCTTTTACAACTGACATCAGGCGGTCTGTTCTTTAATGCCTTAAAGAATGACAAAGAAAATTTCACTGTTTTACAAACCATTCGCCAGCAGCAATCCACGCTGAATGGCAGCTGGGTCGCGTTGTTGCAGACGCGTAACACCCTCAACCGCGCGGGTATCCGCTACATGATGGATCAGAATAATATTGGTAGCGGTTCAACCGTTGCTGAGCTGATGGAGAGTGCCAGTATTTCGCTGAAACAGGCGGAAAAAAACTGGGCGGATTACGAAGCGTTGCCGCGTGACCCGCGTCAGAGCACCGCCGCAGCGGCAGAGATCAAACGTAATTACGATATTTATCACAATGCGCTGGCGGAGCTGATCCAACTGTTAGGTGCAGGCAAAATCAACGAGTTCTTTGATCAGCCGACCCAGGGATATCAGGACGGTTTCGAGAAGCAGTATGTGGCTTACATGGAGCAAAACGATCGGCTCCATGATATCGCCGTCAGCGATAACAATGCCTCCTACAGCCAGGCGATGTGGATTCTGGTGGGCGTGATGATCGTCGTACTGGCGGTCATCTTCGCCGTCTGGTTCGGTATTAAAGCCTCGCTGGTAGCGCCAATGAATCGCCTGATTGACAGCATTCGTCATATTGCAGGCGGCGATCTGGTGAAACCGATTGAGGTGGATGGCTCTAATGAGATGGGGCAACTGGCAGAGAGTTTGCGCCATATGCAGGGAGAGCTGATGCGTACCGTCGGTGATGTGCGCAACGGGGCCAATGCCATCTATAGCGGTGCCAGCGAAATCGCCACCGGCAATAACGATCTCTCTTCGCGCACCGAGCAACAGGCCGCTTCGCTGGAAGAGACGGCAGCCAGCATGGAGCAACTGACCGCAACGGTGAAGCAGAACGCCGAAAATGCGCGCCAGGCCAGCCATCTGGCGTTAAGTGCTTCTGAAACGGCGCAACGCGGCGGTAAAGTGGTAGATAACGTGGTGCAGACTATGCGCGATATCTCCACCAGTTCGCAGAAAATCGCCGATATTATCAGCGTAATTGACGGCATTGCCTTCCAGACCAATATTCTGGCTTTGAACGCGGCGGTTGAGGCTGCGCGTGCGGGTGAGCAAGGGCGCGGTTTTGCGGTGGTCGCGGGAGAAGTGCGTAATCTGGCCCAGCGCAGCGCCCAGGCGGCTCGTGAAATTAAAAGCCTGATTGAAGACTCGGTGGGGAAAGTGGATGTTGGCTCTACGCTGGTCGAAAGCGCCGGGGAAACAATGGCGGAGATTGTCAGCGCCGTGACCCGCGTGACGGACATTATGGGCGAAATTGCTTCTGCTTCTGATGAGCAGAGCCGTGGTATCGATCAGGTTGGCTTAGCGGTTGCTGAGATGGACCGGGTAACTCAACAGAACGCCGCGCTGGTGGAAGAGTCTGCCGCTGCCGCCGCCGCGCTGGAAGAGCAGGCCAGTCGCCTGACCGAAGCAGTGGCAGTGTTCCGGATTCAGCAACAGCAGCGTGAAACATCGGCTGTGGTAAAAACCGTGACGCCAGCTGCGCCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAA", - 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"yjiZ" - ], - [ - "gene_synonym", - "lgoT" - ], - [ - "gene_synonym", - "ECK4346" - ], - [ - "gene_synonym", - "GeneID:948879" - ], - [ - "gene_synonym", - "NP_418776.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39398" - ], - [ - "gene_synonym", - "yjjL" - ], - [ - "gene_synonym", - "GI:16132177" - ], - [ - "gene_synonym", - "ASAP:ABE-0014284" - ], - [ - "gene_synonym", - "b4356" - ], - [ - "gene_synonym", - "JW4319" - ], - [ - "gene_synonym", - "EcoGene:EG12588" - ] - ], - "dna_sequence": "GTGGAAAAAGAAAATATCACCATCGATCCGCGTTCTTCATTTACTCCATCTTCGTCGGCAGATATTCCCGTGCCACCAGATGGATTAGTTCAACGCAGTACCCGAATTAAACGCATTCAAACCACCGCCATGTTGTTATTATTTTTTGCGGCGGTAATCAATTATCTCGACCGCAGTTCGCTGTCGGTAGCAAATTTAACGATTCGTGAAGAATTGGGATTAAGTGCCACCGAAATCGGCGCTTTGCTCTCCGTGTTTTCACTCGCTTACGGGATTGCGCAACTTCCTTGCGGCCCACTATTGGATCGTAAAGGCCCACGCCTGATGCTGGGACTGGGGATGTTCTTCTGGTCACTGTTCCAGGCAATGTCTGGCATGGTGCACAACTTTACGCAGTTCGTGTTGGTGCGTATCGGTATGGGGATTGGTGAAGCGCCGATGAACCCATGCGGTGTAAAAGTCATTAACGACTGGTTCAACATCAAAGAGCGCGGACGCCCGATGGGCTTCTTCAACGCAGCTTCTACCATTGGCGTTGCCGTAAGCCCACCGATTCTGGCGGCGATGATGCTGGTGATGGGCTGGCGCGGGATGTTTATTACCATTGGTGTACTGGGGATTTTTCTCGCCATCGGCTGGTATATGCTCTATCGCAACCGCGAGCACGTAGAACTGACTGCCGTTGAGCAAGCTTATCTCAATGCAGGTAGCGTCAATGCCCGCCGAGATCCGCTCAGTTTTGCCGAATGGCGCAGCCTGTTCCGTAACCGTACAATGTGGGGAATGATGCTCGGATTCAGTGGCATCAACTACACTGCGTGGCTGTATCTGGCCTGGCTTCCTGGTTACCTGCAAACAGCCTATAACCTGGATTTAAAAAGCACAGGGTTGATGGCGGCTATCCCTTTCCTGTTTGGGGCTGCCGGGATGCTGGTCAACGGTTACGTTACCGACTGGCTGGTCAAAGGGGGAATGGCTCCGATTAAAAGCCGTAAGATCTGCATTATTGCCGGGATGTTCTGTTCTGCCGCCTTTACGCTGATAGTACCACAAGCGACAACATCCATGACGGCGGTTCTGCTGATTGGCATGGCACTGTTCTGTATTCACTTTGCCGGAACATCCTGCTGGGGCTTGATCCACGTCGCAGTTGCTTCTCGCATGACTGCGTCGGTGGGCAGTATCCAGAACTTTGCCAGCTTCATCTGCGCCTCTTTTGCGCCGATCATTACTGGTTTTATTGTTGATACCACCCACTCATTCCGTCTGGCACTAATCATCTGCGGTTGCGTCACCGCAGCGGGGGCACTGGCGTACATCTTCCTGGTTCGTCAGCCGATCAACGACCCACGTAAAGATTAA", - "dna_sequence_length": 1362, - "functions": [ - "putative L-galactonate:H+ symporter" - ], - "id": "CDS_4273", - "location": [ - [ - "NC_000913", - 4594722, - "-", - 1362 - ] - ], - "md5": "2b958296dd3a24300e1fb844118345d3", - "parent_gene": "", - "protein_md5": "fbeabd7fabfb9bc29568aa3b03f8a07e", - "protein_translation": "MEKENITIDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAMLLLFFAAVINYLDRSSLSVANLTIREELGLSATEIGALLSVFSLAYGIAQLPCGPLLDRKGPRLMLGLGMFFWSLFQAMSGMVHNFTQFVLVRIGMGIGEAPMNPCGVKVINDWFNIKERGRPMGFFNAASTIGVAVSPPILAAMMLVMGWRGMFITIGVLGIFLAIGWYMLYRNREHVELTAVEQAYLNAGSVNARRDPLSFAEWRSLFRNRTMWGMMLGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMAAIPFLFGAAGMLVNGYVTDWLVKGGMAPIKSRKICIIAGMFCSAAFTLIVPQATTSMTAVLLIGMALFCIHFAGTSCWGLIHVAVASRMTASVGSIQNFASFICASFAPIITGFIVDTTHSFRLALIICGCVTAAGALAYIFLVRQPINDPRKD", - "protein_translation_length": 453, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "YP_026290.1" - ], - [ - "gene_synonym", - "ECK4347" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39399" - ], - [ - "gene_synonym", - "GeneID:948881" - ], - [ - "gene_synonym", - "GI:49176497" - ], - [ - "gene_synonym", - "yjjM" - ], - [ - "gene_synonym", - "ASAP:ABE-0014287" - ], - [ - "gene_synonym", - "EcoGene:EG12589" - ], - [ - "gene_synonym", - "lgoR" - ], - [ - "gene_synonym", - "b4357" - ], - [ - "gene_synonym", - "JW5792" - ] - ], - "dna_sequence": "ATGAGTCGTTCACAAAATTTACGCCACAATGTGATTAACCAGGTCATTGATGATATGGCGCGGGGTCATATCCCTTCCCCACTTCCATCGCAAAGTGCGCTGGCGGAAATGTACAACATCAGCCGCACCACAGTGCGTCATATTCTCAGCCACTTACGCGAATGCGGCGTCTTGACGCAGGTTGGAAACGACTATGTTATTGCGCGTAAACCTGACCATGATGACGGTTTCGCCTGTACTACCGCTTCAATGAGTGAACAAAACAAAGTGTTTGAGCAGGCTTTTTTCACGATGATAAACCAGCGCCAGTTACGCCCAGGGGAAACGTTTTCTGAACTGCAACTGGCTCGGGCCGCGGGTGTCAGCCCGGTTGTAGTAAGAGAATATCTTTTAAAATTCGGCCGTTATAATCTTATTCACAGCGAAAAGCGCGGCCAGTGGAGCATGAAGCAATTCGATCAATCCTACGCCGAGCAGCTGTTTGAGCTACGCGAAATGCTCGAAACACATTCACTTCAGCACTTTCTCAACCTGCCTGATCATGATCCCCGCTGGCTGCAGGCGAAAACCATGCTCGAACGTCATCGGCTACTGCGTGACAACATCGGCAATAGCTTTCGCATGTTCTCGCAACTTGACAGAGATTTTCACTCCTTACTGCTTTCAGCTGCCGACAATATCTTTTTTGATCAATCGCTTGAGATCATCTCAGTCATCTTTCATTTTCACTATCAATGGGACGAAAGCGATCTTAAACAGCGCAATATCATTGCCGTCGATGAGCATATGACCATTCTCAGCGCTCTGATTTGCCGCAGTGACCTTGATGCCACCCTTGCGCTCCGTAACCATTTGAATTCAGCTAAACAATCAATGATTCGATCCATTAATGAGAACACGCGTTATGCTCATTAA", - "dna_sequence_length": 915, - "functions": [ - "putative transcriptional activator for L-galactonate catabolism" - ], - "id": "CDS_4274", - "location": [ - [ - "NC_000913", - 4595851, - "-", - 915 - ] - ], - "md5": "fac0506a719e072f546658457549fbe3", - "parent_gene": "", - "protein_md5": "f982de5dbcd4b891c77e6945f9c4d0ac", - "protein_translation": "MSRSQNLRHNVINQVIDDMARGHIPSPLPSQSALAEMYNISRTTVRHILSHLRECGVLTQVGNDYVIARKPDHDDGFACTTASMSEQNKVFEQAFFTMINQRQLRPGETFSELQLARAAGVSPVVVREYLLKFGRYNLIHSEKRGQWSMKQFDQSYAEQLFELREMLETHSLQHFLNLPDHDPRWLQAKTMLERHRLLRDNIGNSFRMFSQLDRDFHSLLLSAADNIFFDQSLEIISVIFHFHYQWDESDLKQRNIIAVDEHMTILSALICRSDLDATLALRNHLNSAKQSMIRSINENTRYAH", - "protein_translation_length": 304, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4348" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39400" - ], - [ - "gene_synonym", - "GeneID:948883" - ], - [ - "gene_synonym", - "yjjN" - ], - [ - "gene_synonym", - "lgoD" - ], - [ - "gene_synonym", - "b4358" - ], - [ - "gene_synonym", - "ASAP:ABE-0014294" - ], - [ - "gene_synonym", - "GI:226524765" - ], - [ - "gene_synonym", - "EcoGene:EG12590" - ], - [ - "gene_synonym", - "JW5793" - ], - [ - "gene_synonym", - "NP_418778.4" - ] - ], - "dna_sequence": "ATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGTCTGGAAACAACGCGAGATACCTATTCCGGGTGACAATGAAGCATTAATAAAAATTAAGTCTGTCGGGATTTGCGGTACCGATATTCATGCCTGGGGTGGAAATCAACCATTTTTTAGTTATCCACGTGTTTTAGGCCATGAAATATGTGGGGAGATTGTTGGGCTGGGTAAAAATATTGCTGATCTTAAAAATGGTCAGCAAGTTGCTGTGATCCCTTATGTTGCCTGTCAGCAATGCCCGGCGTGTAAAAGCGGGCGTACCAATTGCTGTGAAAAAATTTCAGTCATTGGCGTGCATCAGGATGGCGGTTTTAGTGAGTATTTGAGCGTGCCGGTGGCGAACATTTTGCCCGCAGACGGTATTGACCCGCAGGCGGCAGCATTGATTGAACCTTTCGCTATTAGCGCTCATGCGGTGCGTCGCGCAGCCATTGCTCCCGGCGAGCAGGTGCTGGTGGTCGGGGCGGGGCCAATCGGTCTGGGCGCGGCGGCAATCGCTAAAGCCGATGGCGCACAGGTGGTGGTGGCGGATACCAGTCCGGCGCGCCGTGAACATGTGGCAACGCGTCTGGAATTACCTTTACTGGACCCGTCAGCCGAAGATTTTGACGCGCAGCTACGGGCGCAGTTTGGTGGTTCGCTGGCGCAGAAAGTGATCGACGCGACAGGTAATCAACATGCGATGAATAACACCGTGAATTTGATTCGTCACGGCGGCACGGTGGTATTTGTCGGCCTGTTTAAAGGTGAGTTGCAGTTCTCCGATCCGGAATTCCATAAAAAAGAAACGACGATGATGGGCAGCCGCAACGCCACGCCGGAAGATTTTGCTAAAGTCGGTCGACTGATGGCGGAAGGAAAAATCACTGCTGACATGATGTTAACCCATCGCTATCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGA", - 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"b4359" - ], - [ - "gene_synonym", - "mdoB" - ], - [ - "gene_synonym", - "EcoGene:EG12591" - ], - [ - "gene_synonym", - "opgB" - ], - [ - "gene_synonym", - "ASAP:ABE-0014297" - ], - [ - "gene_synonym", - "JW5794" - ], - [ - "gene_synonym", - "GeneID:948888" - ] - ], - "dna_sequence": "TTGTCAGAACTACTCTCTTTCGCCCTTTTTCTCGCCTCTGTGCTGATTTACGCATGGAAAGCGGGACGTAACACCTGGTGGTTTGCAGCCACGTTAACGGTGCTGGGGCTATTTGTCGTTTTAAATATCACCCTGTTTGCCAGCGACTATTTTACTGGCGATGGTATTAACGACGCGGTTCTCTATACCTTAACCAACAGCCTGACCGGTGCTGGCGTCAGCAAATACATTTTGCCGGGTATCGGCATTGTGCTGGGGCTGACAGCGGTGTTCGGTGCGCTGGGCTGGATCCTGCGCCGTCGTCGCCATCATCCGCACCATTTTGGTTACAGCCTGCTGGCGCTCTTACTGGCGCTGGGTTCGGTGGACGCCAGCCCGGCATTTCGTCAGATAACGGAACTGGTGAAATCCCAGTCACGCGACGGCGACCCGGACTTTGCGGCTTATTATAAAGAGCCGTCGAAAACTATCCCTGACCCGAAACTCAACCTGGTTTATATCTACGGCGAAAGTCTCGAGCGGACCTATTTTGATAACGAGGCTTTCCCGGATCTCACGCCTGAACTGGGCGCGTTGAAAAATGAAGGCCTGGATTTCAGCCACACGCAGCAGCTGCCGGGAACAGATTACACGATTGCGGGCATGGTGGCTTCTCAGTGCGGCATACCGCTGTTTGCCCCCTTTGAAGGCAACGCCTCCGCCTCTGTCTCCAGCTTCTTCCCGCAGAACATCTGTCTGGGAGATATCCTGAAAAACTCGGGTTATCAGAACTATTTCGTGCAGGGCGCGAATCTGCGTTTTGCCGGTAAAGATGTGTTCCTGAAGTCGCATGGCTTCGACCACTTATACGGCTCAGAAGAGCTGAAAAGCGTGGTAGCCGACCCGCACTATCGCAACGACTGGGGATTCTACGACGATACCGTTCTCGATGAAGCGTGGAAAAAGTTTGAAGAGCTTTCCCGCTCAGGTCAGCGATTCTCACTGTTTACCCTGACAGTCGATACCCATCACCCGGATGGTTTTATCTCTCGTACCTGTAACCGCAAAAAATATGATTTTGACGGTAAACCGAATCAGTCATTCAGCGCGGTAAGTTGCAGCCAGGAGAACATCGCGACGTTTATCAACAAAATCAAAGCGTCACCGTGGTTTAAAGATACCGTCATCGTCGTCTCTTCTGACCATTTAGCGATGAACAACACGGCGTGGAAATACCTCAATAAGCAGGATCGCAATAACCTGTTTTTTGTCATTCGTGGCGACAAGCCGCAGCAAGAGACGCTGGCAGTGAAGCGTAACACGATGGATAACGGCGCGACGGTGCTGGACATTCTCGGTGGCGATAACTATCTCGGACTTGGTCGTAGCAGTTTATCCGGGCAGTCGATGTCGGAAATCTTCCTCAATATCAAAGAGAAAACATTGGCGTGGAAGCCAGATATCATCCGCCTGTGGAAATTCCCTAAAGAGATGAAAGAGTTCACCATCGACCAGCAGAAAAACATGATTGCCTTCTCGGGTAGCCATTTCCGTTTGCCGCTGCTGTTGCGGGTTTCAGACAAACGCGTGGAACCGCTGCCGGAAAGCGAATACTCAGCACCGCTGCGTTTCCAGCTGGCCGATTTCGCTCCACGCGACAATTTCGTCTGGGTTGACCGTTGCTACAAGATGGCACAACTCTGGGCTCCGGAACTGGCACTTTCCACCGACTGGTGTGTCTCGCAAGGGCAGCTTGGCGGTCAGCAAATTGTTCAGCATGTTGACAAAACAACATGGCAGGGCAAAACGGCATTTAAAGATACGGTCATCGACATGGCGCGTTACAAAGGCAATGTCGATACGCTGAAGATTGTTGATAACGATATTCGCTACAAAGCCGACAGTTTCATCTTTAACGTCGCCGGTGCGCCAGAAGAGGTGAAACAGTTTAGCGGGATTTCCCGTCCGGAGTCGTGGGGCCGCTGGTCCAACGCGCAGCTGGGCGATGAAGTAAAAATCGAGTACAAGCATCCGCTGCCGAAGAAATTTGACCTGGTGATTACCGCCAAAGCATACGGCAATAACGCCAGCCGTCCTATTCCGGTACGCGTAGGCAATGAAGAACAAACTCTTGTGCTGGGCAATGAAGTGACCACCACCACACTGCATTTCGATAACCCAACCGATGCCGACACACTGGTAATTGTGCCGCCGGAACCTGTCTCAACCAACGAAGGGAATATCCTCGGACACTCGCCGCGTAAGCTCGGGATCGGCATGGTGGAAATTAAAGTGGTAGAACGTGAAGGGTAA", - 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"protein_translation_length": 763, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4350" - ], - [ - "gene_synonym", - "ASAP:ABE-0014301" - ], - [ - "gene_synonym", - "NP_418780.2" - ], - [ - "gene_synonym", - "GeneID:948887" - ], - [ - "gene_synonym", - "GI:90111742" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P18390" - ], - [ - "gene_synonym", - "yjjA" - ], - [ - "gene_synonym", - "JW5795" - ], - [ - "gene_synonym", - "EcoGene:EG11214" - ], - [ - "gene_synonym", - "b4360" - ] - ], - "dna_sequence": "ATGATGAAAACTGTTAAACATCTTCTGTGCTGTGCCATTGCCGCCAGCGCATTAATTTCCACCGGGGTGCATGCTGCGTCCTGGAAAGATGCGCTCTCCAGCGCCGCCAGCGAACTTGGCAACCAAAACAGCACGACACAGGAAGGCGGTTGGTCGCTCGCGTCATTAACTAACTTGCTTAGCAGCGGAAACCAGGCCTTAAGCGCAGATAACATGAACAATGCCGCAGGCATTCTGCAATACTGCGCGAAGCAAAAGCTGGCGTCGGTAACCGATGCCGAAAACATCAAGAACCAGGTGCTGGAAAAGCTGGGCCTGAACAGTGAAGAGCAAAAAGAAGACACCAACTATCTGGACGGCATTCAGGGTTTGCTGAAAACCAAAGATGGTCAGCAACTCAATCTGGATAACATCGGAACAACTCCGCTGGCAGAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGA", - 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], - [ - "gene_synonym", - "b4361" - ] - ], - "dna_sequence": "ATGAAAAACGTTGGCGACCTGATGCAACGCCTGCAAAAAATGATGCCTGCCCATATCAAACCCGCATTCAAAACGGGTGAAGAACTACTGGCCTGGCAAAAAGAACAAGGAGCGATCCGCTCCGCCGCTCTCGAACGTGAAAATCGGGCGATGAAAATGCAGCGCACCTTTAACCGCTCCGGTATTCGTCCACTGCATCAGAACTGTTCCTTTGAGAACTATCGCGTTGAGTGTGAAGGGCAGATGAATGCGTTAAGCAAAGCGCGCCAGTATGTCGAAGAGTTTGACGGCAACATCGCCAGCTTCATCTTTTCTGGTAAGCCAGGAACCGGCAAAAACCATCTGGCGGCGGCAATCTGCAACGAGCTGCTGCTACGCGGTAAATCCGTATTGATCATCACCGTGGCCGATATTATGTCGGCGATGAAAGATACCTTCAGGAATAGCGGTACCAGCGAAGAACAACTGCTTAACGATCTGAGCAACGTTGATCTGCTGGTGATCGATGAGATCGGCGTGCAGACCGAATCGAAATACGAAAAAGTGATCATCAACCAGATCGTCGATCGCCGCTCTTCTTCCAAACGCCCAACCGGGATGCTGACCAACAGTAATATGGAAGAGATGACCAAGTTGCTGGGCGAACGCGTGATGGACCGTATGCGCCTGGGTAACAGTTTGTGGGTGATCTTCAACTGGGATAGCTACCGTAGCCGGGTAACAGGTAAAGAGTATTAA", - "dna_sequence_length": 738, - "functions": [ - "DNA biosynthesis protein" - ], - "id": "CDS_4278", - "location": [ - [ - "NC_000913", - 4600975, - "-", - 738 - ] - ], - "md5": "76758ac138b6874d5a6a9678e486a7d1", - "parent_gene": "", - "protein_md5": "3a20811860fd83fc5985fe52fc54224b", - "protein_translation": "MKNVGDLMQRLQKMMPAHIKPAFKTGEELLAWQKEQGAIRSAALERENRAMKMQRTFNRSGIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIASFIFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTFRNSGTSEEQLLNDLSNVDLLVIDEIGVQTESKYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVMDRMRLGNSLWVIFNWDSYRSRVTGKEY", - "protein_translation_length": 245, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4352" - ], - [ - "gene_synonym", - "ASAP:ABE-0014306" - ], - [ - "gene_synonym", - "dnaT" - ], - [ - "gene_synonym", - "JW4326" - ], - [ - "gene_synonym", - "b4362" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A8J2" - ], - [ - "gene_synonym", - "GeneID:948813" - ], - [ - "gene_synonym", - "EcoGene:EG10244" - ], - [ - "gene_synonym", - "NP_418782.1" - ], - [ - "gene_synonym", - "GI:16132183" - ] - ], - "dna_sequence": "ATGTCTTCCAGAGTTTTGACCCCGGACGTCGTTGGTATTGACGCCCTGGTACACGATCACCAAACCGTTCTGGCAAAAGCTGAAGGCGGTGTGGTTGCCGTATTTGCTAACAATGCCCCGGCGTTTTATGCCGTCACGCCTGCACGCCTGGCTGAACTGCTGGCGCTGGAAGAAAAGCTGGCGCGTCCGGGAAGCGATGTCGCTCTGGACGATCAACTCTATCAGGAACCGCAAGCCGCTCCCGTTGCTGTACCCATGGGGAAATTCGCCATGTATCCGGACTGGCAACCCGATGCCGATTTTATCCGCCTGGCGGCGCTATGGGGCGTGGCGCTAAGAGAGCCGGTGACCACCGAAGAACTGGCCTCATTCATTGCCTACTGGCAGGCGGAAGGTAAAGTCTTTCACCATGTGCAGTGGCAACAAAAACTGGCGCGCAGCCTGCAAATCGGTCGTGCCAGCAACGGCGGACTGCCGAAACGAGATGTGAATACGGTCAGCGAACCTGACAGCCAAATTCCACCAGGATTCAGAGGGTAA", - "dna_sequence_length": 540, - "functions": [ - "DNA biosynthesis protein (primosomal protein I)" - ], - "id": "CDS_4279", - "location": [ - [ - "NC_000913", - 4601517, - "-", - 540 - ] - ], - "md5": "d969921217176098863f86b5adf91c55", - "parent_gene": "", - "protein_md5": "fcc61c0ea47cfb1f334791ad9d324d25", - "protein_translation": "MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPKRDVNTVSEPDSQIPPGFRG", - "protein_translation_length": 179, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADD2" - ], - [ - "gene_synonym", - "ECK4353" - ], - [ - "gene_synonym", - "ASAP:ABE-0014310" - ], - [ - "gene_synonym", - "JW4327" - ], - [ - "gene_synonym", - "GeneID:948811" - ], - [ - "gene_synonym", - "NP_418783.2" - ], - [ - "gene_synonym", - "b4363" - ], - [ - "gene_synonym", - "GI:145698348" - ], - [ - "gene_synonym", - "EcoGene:EG11215" - ], - [ - "gene_synonym", - "yjjB" - ] - ], - "dna_sequence": "ATGGGTGTGATCGAATTTCTGTTAGCGTTGGCGCAGGATATGATCCTCGCCGCCATTCCTGCGGTCGGCTTTGCGATGGTGTTCAACGTTCCCGTGCGGGCGTTACGCTGGTGTGCGCTGCTTGGCTCGATAGGTCATGGTTCCCGAATGATCTTGATGACCAGCGGGTTGAATATTGAGTGGTCAACCTTTATGGCTTCTATGCTGGTCGGTACCATTGGTATTCAATGGTCGCGCTGGTATCTGGCGCATCCGAAAGTGTTTACCGTGGCGGCCGTTATCCCTATGTTCCCGGGCATATCGGCTTATACCGCAATGATTTCGGCGGTAAAAATCAGCCAGTTAGGTTACAGCGAACCGTTGATGATTACCCTGTTAACCAACTTTCTTACAGCTTCATCGATTGTTGGTGCGTTATCCATCGGTCTTTCCATTCCTGGATTATGGTTGTACCGCAAGCGCCCTCGCGTATAA", - "dna_sequence_length": 474, - "functions": [ - "DUF3815 family inner membrane protein" - ], - "id": "CDS_4280", - "location": [ - [ - "NC_000913", - 4602097, - "-", - 474 - ] - ], - "md5": "63d49616ffedadc1ab9925e107bc7836", - "parent_gene": "", - "protein_md5": "81cce493566012b3367597e359c44185", - "protein_translation": "MGVIEFLLALAQDMILAAIPAVGFAMVFNVPVRALRWCALLGSIGHGSRMILMTSGLNIEWSTFMASMLVGTIGIQWSRWYLAHPKVFTVAAVIPMFPGISAYTAMISAVKISQLGYSEPLMITLLTNFLTASSIVGALSIGLSIPGLWLYRKRPRV", - "protein_translation_length": 157, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4354" - ], - [ - "gene_synonym", - "ASAP:ABE-0014313" - ], - [ - "gene_synonym", - "NP_418784.4" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADD5" - ], - [ - "gene_synonym", - "GeneID:948812" - ], - [ - "gene_synonym", - "GI:90111743" - ], - [ - "gene_synonym", - "EcoGene:EG12592" - ], - [ - "gene_synonym", - "b4364" - ], - [ - "gene_synonym", - "yjjP" - ], - [ - "gene_synonym", - "JW5796" - ] - ], - "dna_sequence": "ATGCAAACTGAGCAACAGCGAGCCGTAACACGGCTTTGTATCCAGTGTGGATTATTTCTTTTGCAACATGGTGCGGAAAGCGCGTTGGTTGATGAGCTTTCCTCACGACTGGGTCGGGCACTGGGAATGGACAGCGTCGAAAGTTCTATCTCTTCGAACGCCATAGTGCTGACAACTATTAAAGATGGGCAATGCCTGACATCGACACGTAAAAATCACGATCGCGGCATTAATATGCATGTGGTGACTGAAGTCCAGCACATTGTGATTCTTGCGGAGCATCATCTGCTGGATTACAAAGGCGTAGAGAAACGATTTAGCCAAATTCAGCCATTACGTTACCCAAGATGGCTGGTAGCCTTAATGGTTGGCCTTTCTTGCGCCTGTTTCTGTAAACTCAATAACGGTGGCTGGGATGGTGCCGTCATCACCTTCTTTGCCAGTACGACCGCGATGTATATCCGCCAGCTGCTGGCACAACGTCATCTTCATCCACAGATCAACTTTTGCCTTACCGCTTTCGCCGCCACCACCATTTCCGGATTGCTTTTGCAACTCCCCACTTTCAGCAATACCCCCACCATTGCGATGGCCGCCAGCGTTCTGCTGCTAGTGCCGGGCTTTCCGTTGATTAATGCCGTCGCCGATATGTTTAAAGGCCACATCAATACCGGACTGGCACGCTGGGCGATCGCCAGTCTGCTGACACTGGCTACCTGCGTCGGCGTAGTGATGGCACTGACGATTTGGGGGCTACGCGGATGGGTGTGA", - "dna_sequence_length": 771, - "functions": [ - "DUF1212 family inner membrane protein" - ], - "id": "CDS_4281", - "location": [ - [ - "NC_000913", - 4602858, - "-", - 771 - ] - ], - "md5": "9d0a222af0992eb15e6e0d99d915d784", - "parent_gene": "", - "protein_md5": "6949e890fc713d041a3fb4210745d3d7", - "protein_translation": "MQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMDSVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGVEKRFSQIQPLRYPRWLVALMVGLSCACFCKLNNGGWDGAVITFFASTTAMYIRQLLAQRHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMFKGHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV", - "protein_translation_length": 256, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4355" - ], - [ - "gene_synonym", - "NP_418785.1" - ], - [ - "gene_synonym", - "JW4329" - ], - [ - "gene_synonym", - "yjjQ" - ], - [ - "gene_synonym", - "GeneID:948896" - ], - [ - "gene_synonym", - "EcoGene:EG12593" - ], - [ - "gene_synonym", - "GI:16132186" - ], - [ - "gene_synonym", - "b4365" - ], - [ - "gene_synonym", - "ASAP:ABE-0014322" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADD7" - ] - ], - "dna_sequence": "ATGTTGCCAGGATGCTGCAAAAATGGAATTGTTATCAGTAAAATACCTGTTATGCAAGCAGGGTTAAAAGAGGTCATGAGGACTCACTTCCCTGAATATGAAATAATATCCAGCGCCTCTGCGGAGGACCTTACCTTATTACAATTACGTCGTTCCGGATTAGTCATTGCTGATTTAGCCGGTGAAAGTGAAGATCCACGTTCTGTTTGTGAACATTATTATTCTTTAATCTCACAATATCGGGAAATTCACTGGGTTTTCATGGTGTCACGCTCCTGGTATTCCCAGGCAGTAGAACTGCTCATGTGCCCTACGGCGACGTTATTGTCTGATGTTGAACCCATTGAGAATCTGGTCAAGACCGTACGTTCCGGCAATACGCACGCAGAGCGTATCAGCGCCATGCTGACCTCCCCGGCAATGACTGAAACTCATGATTTTAGCTATCGCTCCGTCATTCTCACTCTTTCAGAGCGCAAGGTACTGCGGCTATTAGGTAAAGGATGGGGCATCAACCAGATAGCTTCATTGCTTAAGAAAAGTAATAAAACTATCAGCGCCCAAAAAAACAGTGCGATGCGTCGACTGGCAATTCACAGCAACGCTGAAATGTATGCATGGATAAATAGCGCGCAGGGTGCAAGAGAACTTAACTTGCCTTCTGTTTATGGAGATGCCGCAGAATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAG", - "dna_sequence_length": 726, - "functions": [ - "putative transcriptional regulator" - ], - "id": "CDS_4282", - "location": [ - [ - "NC_000913", - 4603477, - "+", - 726 - ] - ], - "md5": "2646f63d67f263e87009ea4ac52ef44b", - "parent_gene": "", - "protein_md5": "66319064d61836b210e41c9ee90775ca", - "protein_translation": "MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYRSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSHS", - "protein_translation_length": 241, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "EcoGene:EG12594" - ], - [ - "gene_synonym", - "bglJ" - ], - [ - "gene_synonym", - "GeneID:948889" - ], - [ - "gene_synonym", - "ECK4356" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39404" - ], - [ - "gene_synonym", - "yjjR" - ], - [ - "gene_synonym", - "GI:345452726" - ], - [ - "gene_synonym", - "ASAP:ABE-0014324" - ], - [ - "gene_synonym", - "NP_418786.4" - ], - [ - "gene_synonym", - "JW5955" - ], - [ - "gene_synonym", - "b4366" - ] - ], - "dna_sequence": "ATGGAACACAGCCGAATTAAGAAGAGAAATGTCGCACTCATAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCATTTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATCTTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGGACGGTGTATTAAGTAAAGCGTCAACGCTGGAGATTTTTCATCAGGAACTCTTTTTGTCATTAAATGGTGTACGTCAGGCGACCGACCGACTGAACAATCAGTGGTACATTAACCAAAGCCGGACGTTAAGCCCGACGGAGAGAGAAATATTGCGCTTTATGTCGCGTGGCTACTCAATGACACAAATTGCCGAGCAGCTTAAACGCAATATCAAAACGATCCGTGCACATAAATTTAATGTGATGTCGAAACTGGGCGTCAGTTCTGACGCAGGGTTGTTGGAGGCCGCAGATATTCTGTTATGTATGCGGCATTGCGAAACAAGTAATGTGTTGCATCCCTATTAA", - 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] - ], - "dna_sequence": "ATGTTGCAACGTACGCTGGGCAGTGGCTGGGGAGTGTTGCTGCCGGGATTGCTGATTGCAGGGCTGATGTATGCGGATTTATCGTCAGATCAGTGGCGGATTGTCATTCTGATGGGATTAGTATTGACGCCGATGATGCTGTATCACAAACAGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGA", - "dna_sequence_length": 237, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_4285", - "location": [ - [ - "NC_000913", - 4605804, - "+", - 237 - ] - ], - "md5": "578bb40d9be343af886e28b25a774284", - "parent_gene": "", - "protein_md5": "18d3a59c8ae74d442ae92f53bfd78174", - "protein_translation": "MLQRTLGSGWGVLLPGLLIAGLMYADLSSDQWRIVILMGLVLTPMMLYHKQLRHYILLPSCLALIAGIMLMIMNLNQG", - "protein_translation_length": 78, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "rsmC" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39406" - ], - [ - "gene_synonym", - "yjjT" - ], - [ - "gene_synonym", - "JW4333" - ], - [ - "gene_synonym", - "ECK4362" - ], - [ - "gene_synonym", - "GeneID:948892" - ], - [ - "gene_synonym", - "EcoGene:EG12596" - ], - [ - "gene_synonym", - "GI:16132189" - ], - [ - "gene_synonym", - "ASAP:ABE-0014336" - ], - [ - "gene_synonym", - "b4371" - ], - [ - "gene_synonym", - "NP_418788.1" - ] - ], - "dna_sequence": "ATGTCTGCATTTACCCCGGCAAGTGAAGTCTTGCTGCGTCACAGTGATGATTTCGAACAAAGCCGTATTCTGTTTGCCGGAGACTTACAGGATGACCTGCCCGCGCGTTTAGATACCGCGGCCAGCCGTGCTCATACCCAGCAATTCCACCACTGGCAGGTATTAAGCCGCCAGATGGGGGATAACGCCCGTTTCAGTCTGGTCGCCACGGCGGATGACGTCGCAGATTGCGATACGCTGATTTACTACTGGCCGAAGAACAAACCGGAAGCCCAGTTCCAGTTGATGAATTTACTTTCTCTGCTGCCAGTGGGGACAGATATTTTTGTCGTTGGCGAGAACCGCAGCGGCGTGCGCAGCGCCGAGCAGATGCTGGCAGATTATGCGCCGTTGAATAAAGTCGACAGCGCTCGTCGCTGTGGCCTCTATTTTGGTCGTCTGGAAAAACAGCCGGTATTTGATGCGGAGAAATTCTGGGGCGAATACAGCGTCGATGGCCTGACGGTCAAAACGCTGCCTGGCGTGTTTAGCCGCGACGGTCTGGATGTCGGTAGCCAGTTGCTGCTCTCGACGTTAACTCCGCACACGAAAGGTAAAGTGCTGGATGTCGGCTGTGGCGCGGGCGTGCTTTCAGTTGCCTTTGCGCGCCATTCGCCGAAAATTCGTCTCACCTTGTGCGATGTCTCTGCCCCGGCGGTAGAAGCCAGCCGCGCAACACTTGCGGCCAACGGTGTTGAAGGTGAAGTCTTTGCCAGCAACGTCTTTTCCGAGGTGAAAGGTCGTTTTGATATGATCATCTCCAACCCGCCGTTCCACGATGGGATGCAAACCAGCCTGGATGCGGCGCAAACGCTGATTCGCGGTGCGGTGCGTCATCTTAATAGCGGCGGCGAGCTGCGAATTGTAGCGAACGCCTTCCTGCCTTATCCGGACGTGCTGGATGAGACATTTGGCTTCCACGAAGTGATCGCGCAAACAGGGCGCTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAA", - 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"ASAP:ABE-0014340" - ], - [ - "gene_synonym", - "holD" - ], - [ - "gene_synonym", - "GI:16132190" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P28632" - ], - [ - "gene_synonym", - "b4372" - ] - ], - "dna_sequence": "ATGACATCCCGACGAGACTGGCAGTTACAGCAACTGGGCATTACCCAGTGGTCGCTGCGTCGCCCTGGCGCGTTGCAGGGGGAGATTGCCATTGCGATCCCGGCACACGTCCGTCTGGTGATGGTGGCAAACGATCTTCCCGCCCTGACTGATCCTTTAGTGAGCGATGTTCTGCGCGCATTAACCGTCAGCCCCGACCAGGTGCTGCAACTGACGCCAGAAAAAATCGCGATGCTGCCGCAAGGCAGTCACTGCAACAGTTGGCGGTTGGGTACTGACGAACCGCTATCACTGGAAGGCGCTCAGGTGGCATCACCGGCGCTCACCGATTTACGGGCAAACCCAACGGCACGCGCCGCGTTATGGCAACAAATTTGCACATATGAACACGATTTCTTCCCTCGAAACGACTGA", - "dna_sequence_length": 414, - "functions": [ - "DNA polymerase III, psi subunit" - ], - "id": "CDS_4287", - "location": [ - [ - "NC_000913", - 4607803, - "+", - 414 - ] - ], - "md5": "42f97ab3447b85ea1b796a95c07ef345", - "parent_gene": "", - "protein_md5": "171ec41d686c0605e00aef622a540ff2", - "protein_translation": "MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFPRND", - 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"GeneID:948897" - ], - [ - "gene_synonym", - "JW5873" - ], - [ - "gene_synonym", - "b4375" - ], - [ - "gene_synonym", - "NP_418792.1" - ], - [ - "gene_synonym", - "GI:16132193" - ] - ], - "dna_sequence": "ATGACGTTGTCTCCTTATTTGCAAGAGGTGGCGAAGCGCCGCACTTTTGCCATTATTTCTCACCCGGACGCCGGTAAGACTACCATCACCGAGAAGGTGCTGCTGTTCGGACAGGCCATTCAGACCGCCGGTACAGTAAAAGGCCGTGGTTCCAACCAGCACGCTAAGTCGGACTGGATGGAGATGGAAAAGCAGCGTGGGATCTCCATTACTACGTCTGTGATGCAGTTTCCGTATCACGATTGCCTGGTTAACCTGCTCGACACCCCGGGGCACGAAGACTTCTCGGAAGATACCTATCGTACCCTGACGGCGGTGGACTGCTGCCTGATGGTTATCGACGCCGCAAAAGGTGTTGAAGATCGTACCCGTAAGCTGATGGAAGTTACCCGTCTGCGCGACACGCCGATCCTCACCTTTATGAACAAACTTGACCGTGATATCCGCGACCCGATGGAGCTGCTCGATGAAGTTGAGAACGAGCTGAAAATCGGCTGTGCGCCGATCACCTGGCCGATTGGCTGCGGCAAGCTGTTTAAAGGCGTTTACCACCTTTATAAAGACGAAACCTATCTCTATCAGAGCGGTAAAGGCCACACCATTCAGGAAGTCCGCATTGTTAAAGGGCTGAATAACCCGGATCTCGATGCTGCGGTTGGTGAAGATCTGGCACAGCAGCTGCGTGACGAACTGGAACTGGTGAAAGGCGCGTCTAACGAGTTCGACAAAGAGCTGTTCCTTGCGGGCGAAATCACTCCGGTATTCTTCGGTACTGCGCTGGGTAACTTCGGCGTCGATCATATGTTGGATGGCCTGGTGGAGTGGGCACCTGCGCCGATGCCGCGTCAGACTGATACCCGTACCGTAGAAGCGAGCGAAGATAAATTTACCGGCTTCGTATTTAAAATTCAGGCCAACATGGACCCGAAACACCGCGACCGCGTGGCGTTTATGCGTGTGGTGTCCGGTAAATATGAAAAAGGCATGAAACTGCGCCAGGTGCGCACTGCGAAAGATGTGGTGATCTCCGACGCGCTGACCTTTATGGCGGGTGACCGTTCGCACGTTGAAGAAGCGTATCCGGGCGATATCCTCGGCCTGCACAACCACGGCACCATTCAGATCGGCGACACCTTTACCCAGGGTGAGATGATGAAGTTCACCGGTATTCCGAACTTCGCACCAGAACTGTTCCGTCGTATCCGCCTGAAAGATCCGCTGAAGCAAAAACAGCTGCTCAAAGGGCTGGTACAGCTTTCCGAAGAGGGCGCGGTGCAGGTGTTCCGTCCAATCTCCAACAACGATCTGATCGTTGGTGCAGTTGGTGTGCTGCAGTTTGATGTGGTGGTAGCGCGCCTGAAGAGCGAATACAACGTTGAAGCAGTGTATGAGTCAGTCAACGTTGCCACTGCCCGCTGGGTAGAATGTGCAGACGCGAAGAAATTCGAAGAGTTCAAGCGTAAGAACGAAAGCCAACTGGCGCTTGATGGCGGCGATAACCTCGCTTACATCGCTACCAGCATGGTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAA", - 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], - [ - "gene_synonym", - "JW4340" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39407" - ] - ], - "dna_sequence": "GTGGGGCAGCGAATACCTGTAACGCTTGGTAATATTGCGCCGTTGTCGCTAAGGCCGTTCCAGCCTGGACGAATAGCTCTGGTGTGCGAAGGCGGCGGACAGCGTGGAATTTTCACGGCTGGCGTGCTGGATGAGTTTATGCGCGCGCAGTTTAATCCTTTCGATCTTTATCTCGGCACATCTGCCGGGGCGCAGAACCTCTCGGCGTTTATCTGCAATCAGCCCGGTTACGCGCGCAAAGTCATCATGCGCTATACCACAAAACGCGAATTTTTCGATCCATTGCGCTTTGTCCGTGGAGGAAATCTTATCGATCTCGACTGGCTGGTGGAGGCCACTGCAAGCCAGATGCCGTTGCAAATGGATACCGCCGCGCGGTTGTTTGACAGCGGCAAATCGTTTTATATGTGCGCCTGTCGTCAGGATGACTACGCGCCGAATTACTTTTTACCAACCAAACAAAACTGGCTGGATGTGATTCGCGCCTCCAGTGCGATACCTGGCTTTTATCGTAGCGGAGTGTCGCTGGAAGGCATTAACTACCTGGATGGCGGGATCAGTGATGCGATTCCGGTTAAAGAGGCGGCAAGGCAGGGCGCTAAAACGTTGGTCGTCATTCGCACTGTGCCGTCACAAATGTACTACACGCCGCAGTGGTTCAAACGCATGGAACGCTGGCTGGGTGACAGTAGCCTGCAGCCGCTGGTCAATCTGGTGCAGCATCATGAAACCAGCTATCGTGACATTCAGCAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCACGGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACCCGACATTTAACAATGAGGATCTGGCTTGA", - 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"putative pyruvate formate lyase activating enzyme" - ], - "id": "CDS_4295", - "location": [ - [ - "NC_000913", - 4615543, - "-", - 864 - ] - ], - "md5": "143dd92b2447084507d5f35ae3d27d0c", - "parent_gene": "", - "protein_md5": "ada089347979bae80e6dda0dcd6c36f5", - "protein_translation": "MNSRCALVSKIIPFSCVDGPGSRLALFLQGCNLRCKNCHNPWTMGRCNDCGECVPQCPHQALQIVDGKVVWNAVVCEQCDTCLKRCPQHATPMAQSMSVDEVLSHVRKAVLFIEGITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETGWEKLLPVCDGAMLDLKAWGSECHQQLTGRDNQQIKRSIYLLAERGKLAELRLLVIPGQVDYLQHIEELAAFIKGLGDVPVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKVRGVSRLIFPALYL", - "protein_translation_length": 287, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "NP_418797.1" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37342" - ], - [ - "gene_synonym", - "ECK4372" - ], - [ - "gene_synonym", - "GeneID:948904" - ], - [ - "gene_synonym", - "EcoGene:EG12171" - ], - [ - "gene_synonym", - "b4380" - ], - [ - "gene_synonym", - "ASAP:ABE-0014361" - ], - [ - "gene_synonym", - "yjjI" - 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"tlr" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A6L0" - ], - [ - "gene_synonym", - "EcoGene:EG10221" - ], - [ - "gene_synonym", - "ECK4373" - ], - [ - "gene_synonym", - "JW4344" - ], - [ - "gene_synonym", - "GeneID:948902" - ], - [ - "gene_synonym", - "b4381" - ], - [ - "gene_synonym", - "ASAP:ABE-0014371" - ], - [ - "gene_synonym", - "GI:16132198" - ], - [ - "gene_synonym", - "dra" - ], - [ - "gene_synonym", - "thyR" - ], - [ - "gene_synonym", - "deoC" - ] - ], - "dna_sequence": "ATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGTATCGCTACGGTAACCAACTTCCCACACGGTAACGACGACATCGACATCGCGCTGGCAGAAACCCGTGCGGCAATCGCCTACGGTGCTGATGAAGTTGACGTTGTGTTCCCGTACCGCGCGCTGATGGCGGGTAACGAGCAGGTTGGTTTTGACCTGGTGAAAGCCTGTAAAGAGGCTTGCGCGGCAGCGAATGTACTGCTGAAAGTGATCATCGAAACCGGCGAACTGAAAGACGAAGCGCTGATCCGTAAAGCGTCTGAAATCTCCATCAAAGCGGGTGCGGACTTCATCAAAACCTCTACCGGTAAAGTGGCTGTGAACGCGACGCCGGAAAGCGCGCGCATCATGATGGAAGTGATCCGTGATATGGGCGTAGAAAAAACCGTTGGTTTCAAACCGGCGGGCGGCGTGCGTACTGCGGAAGATGCGCAGAAATATCTCGCCATTGCAGATGAACTGTTCGGTGCTGACTGGGCAGATGCGCGTCACTACCGCTTTGGCGCTTCCAGCCTGCTGGCAAGCCTGCTGAAAGCGCTGGGTCACGGCGACGGTAAGAGCGCCAGCAGCTACTAA", - 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"b4382" - ], - [ - "gene_synonym", - "ECK4374" - ], - [ - "gene_synonym", - "tpp" - ], - [ - "gene_synonym", - "deoA" - ], - [ - "gene_synonym", - "ttg" - ], - [ - "gene_synonym", - "GI:16132199" - ] - ], - "dna_sequence": "TTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCGATGAAGAAATTCGTTTCTTTATCAACGGTATTCGCGACAACACTATCTCCGAAGGGCAGATTGCCGCCCTCGCGATGACCATTTTCTTCCACGATATGACAATGCCTGAGCGTGTCTCGCTGACCATGGCGATGCGAGATTCAGGAACCGTTCTCGACTGGAAAAGCCTGCATCTGAATGGCCCGATTGTTGATAAACACTCCACCGGTGGCGTCGGCGATGTGACTTCGCTGATGTTGGGGCCGATGGTCGCAGCCTGCGGCGGCTATATTCCGATGATCTCTGGTCGCGGCCTCGGTCATACTGGCGGTACGCTCGACAAACTGGAATCCATCCCTGGCTTCGACATTTTCCCGGATGACAACCGTTTCCGCGAAATTATTAAAGACGTCGGCGTGGCGATTATCGGTCAGACCAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCGTGGACTCCATCCCGCTGATCACCGCCTCTATTCTGGCGAAGAAACTTGCGGAAGGTCTGGACGCGCTGGTGATGGACGTGAAAGTGGGTAGCGGCGCGTTTATGCCGACCTACGAACTCTCTGAAGCCCTTGCCGAAGCGATTGTTGGCGTGGCTAACGGCGCTGGCGTGCGCACCACCGCGCTGCTCACCGACATGAATCAGGTACTGGCCTCCAGTGCAGGTAACGCGGTTGAAGTTCGTGAAGCGGTGCAGTTCCTGACGGGTGAATATCGTAACCCGCGTCTGTTTGATGTCACGATGGCGCTGTGCGTGGAGATGCTGATCTCCGGCAAACTGGCGAAAGATGACGCCGAAGCGCGCGCGAAATTGCAGGCGGTGCTGGACAACGGTAAAGCGGCAGAAGTCTTTGGTCGTATGGTAGCGGCACAAAAAGGCCCGACCGACTTCGTTGAGAACTACGCGAAGTATCTGCCGACAGCGATGCTGACGAAAGCAGTCTATGCTGATACCGAAGGTTTTGTCAGTGAAATGGATACCCGCGCGCTGGGGATGGCAGTGGTTGCAATGGGCGGCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAA", - 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"NP_418803.1" - ], - [ - "gene_synonym", - "ASAP:ABE-0014385" - ], - [ - "gene_synonym", - "slr" - ], - [ - "gene_synonym", - "GeneID:944865" - ], - [ - "gene_synonym", - "lplA" - ], - [ - "gene_synonym", - "b4386" - ], - [ - "gene_synonym", - "yjjF" - ], - [ - "gene_synonym", - "GI:16132203" - ], - [ - "gene_synonym", - "JW4349" - ] - ], - "dna_sequence": "ATGTCCACATTACGCCTGCTCATCTCTGACTCTTACGACCCGTGGTTTAACCTGGCGGTGGAAGAGTGTATTTTTCGCCAAATGCCCGCCACGCAGCGCGTTCTGTTTCTCTGGCGCAATGCCGACACGGTAGTAATTGGTCGCGCGCAGAACCCGTGGAAAGAGTGTAATACCCGGCGGATGGAAGAAGATAACGTCCGCCTGGCGCGGCGCAGTAGCGGTGGCGGCGCGGTGTTCCACGATCTCGGCAATACCTGCTTTACCTTTATGGCTGGCAAGCCGGAGTACGATAAAACTATCTCCACGTCGATTGTGCTCAATGCGCTGAACGCGCTCGGCGTCAGCGCCGAAGCGTCCGGACGTAACGATCTGGTGGTGAAAACCGTCGAAGGCGACCGCAAAGTCTCAGGCTCGGCCTATCGCGAAACCAAAGATCGCGGCTTCCACCACGGCACCTTGCTACTCAATGCCGACCTCAGCCGCCTGGCAAACTATCTCAATCCGGATAAAAAGAAACTGGCGGCGAAAGGCATTACGTCGGTACGTTCCCGCGTGACCAACCTCACCGAGCTGTTGCCGGGGATCACCCATGAGCAGGTTTGCGAGGCCATAACCGAGGCCTTTTTCGCCCATTATGGCGAGCGCGTGGAAGCGGAAATCATCTCCCCGAACAAAACGCCAGACTTGCCAAACTTCGCCGAAACCTTTGCCCGCCAGAGTAGCTGGGAATGGAACTTCGGTCAGGCTCCGGCATTCTCGCATCTGCTGGATGAACGCTTTACCTGGGGCGGCGTGGAACTGCATTTCGACGTTGAAAAAGGCCATATCACCCGCGCCCAGGTGTTTACCGACAGCCTCAACCCCGCGCCGCTGGAAGCCCTCGCCGGACGACTGCAAGGCTGCCTGTACCGCGCAGATATGCTGCAACAGGAGTGCGAAGCGCTGTTGGTTGACTTCCCGGAACAGGAAAAAGAGCTACGGGAGTTATCGGCATGGATGGCGGGGGCTGTAAGGTAG", - 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"EcoGene:EG10951" - ], - [ - "gene_synonym", - "b4387" - ], - [ - "gene_synonym", - "GI:16132204" - ], - [ - "gene_synonym", - "JW4350" - ], - [ - "gene_synonym", - "ASAP:ABE-0014387" - ] - ], - "dna_sequence": "ATGGCTCGCACAAAACTGAAATTCCGGCTGCATCGGGCAGTGATTGTCCTGTTCTGTCTTGCCTTGTTAGTGGCGCTGATGCAGGGAGCGTCATGGTTTAGTCAAAACCACCAGCGACAGCGTAATCCACAGCTGGAAGAACTGGCCCGCACCCTGGCGCGTCAGGTGACGCTGAACGTTGCACCGCTGATGCGTACCGACTCACCGGATGAAAAACGCATTCAGGCGATCCTCGATCAGTTAACGGATGAAAGCCGTATCCTCGACGCGGGTGTGTATGACGAACAAGGCGATCTTATCGCACGTTCTGGCGAAAGCGTCGAAGTGCGCGACCGGCTGGCGCTCGACGGTAAAAAAGCAGGCGGCTATTTTAACCAGCAGATTGTCGAGCCAATTGCGGGTAAAAACGGACCGCTCGGCTATCTGCGCCTGACACTCGACACCCATACGCTCGCCACCGAAGCCCAACAGGTGGATAACACCACTAACATTTTACGCCTGATGTTGCTGCTCTCACTGGCAATCGGTGTAGTGCTGACCCGCACGCTGCTACAGGGTAAACGCACCCGCTGGCAGCAATCGCCCTTCCTGTTAACCGCCAGCAAACCGGTGCCGGAAGAGGAAGAAAGCGAGAAAAAAGAGTGA", - "dna_sequence_length": 645, - "functions": [ - "SMP_2 family putative membrane-anchored periplasmic protein" - ], - "id": "CDS_4303", - "location": [ - 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], - [ - "gene_synonym", - "JW4352" - ], - [ - "gene_synonym", - "ASAP:ABE-0014395" - ], - [ - "gene_synonym", - "b4389" - ], - [ - "gene_synonym", - "GI:16132206" - ] - ], - "dna_sequence": "GTGGCAAAAGCTCCAAAACGCGCCTTTGTTTGTAATGAATGCGGGGCCGATTATCCGCGCTGGCAGGGGCAGTGCAGTGCCTGTCATGCCTGGAACACCATCACCGAGGTGCGTCTTGCTGCGTCGCCAATGGTGGCGCGTAACGAGCGTCTCAGCGGCTATGCCGGTAGCGCCGGGGTGGCAAAAGTCCAGAAACTCTCCGATATCAGCCTTGAAGAGCTGCCGCGTTTTTCCACCGGATTTAAAGAGTTCGACCGCGTACTAGGCGGCGGCGTGGTGCCAGGAAGTGCCATTCTGATTGGCGGTAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAACAGATCTGCCTGATTGCCGAAGAAGAGCAACCGAAGCTGATGGTAATTGACTCGATCCAGGTGATGCATATGGCGGATGTACAGTCATCGCCTGGTAGCGTGGCGCAGGTGCGTGAAACGGCGGCTTATTTGACACGCTTCGCCAAAACGCGCGGTGTGGCGATTGTCATGGTGGGGCACGTAACCAAAGATGGTTCGCTGGCTGGCCCGAAAGTGCTGGAACACTGTATCGACTGTTCGGTGCTTTTGGATGGCGATGCCGACTCCCGTTTTCGCACCTTGCGCAGCCATAAAAACCGCTTCGGCGCGGTGAATGAGCTGGGCGTCTTCGCGATGACCGAACAGGGGCTGCGTGAAGTCAGCAACCCTTCGGCAATTTTCTTAAGTCGCGGCGATGAAGTGACCTCCGGTAGCTCAGTGATGGTGGTATGGGAAGGAACGCGTCCACTGCTGGTGGAGATTCAGGCGCTGGTCGATCACTCGATGATGGCGAACCCACGCCGCGTGGCAGTGGGGCTGGAACAAAACCGTCTGGCAATCCTGCTGGCTGTGTTGCACCGTCACGGTGGTCTGCAAATGGCCGATCAGGATGTGTTTGTGAACGTGGTCGGCGGCGTGAAGGTAACCGAAACCAGTGCCGACTTAGCGTTACTGCTGGCGATGGTTTCCAGCCTGCGCGACAGACCGCTGCCGCAGGATCTGGTGGTGTTTGGTGAAGTCGGGCTGGCAGGGGAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAA", - "dna_sequence_length": 1383, - "functions": [ - "DNA repair protein" - ], - "id": "CDS_4305", - "location": [ - [ - "NC_000913", - 4625912, - "+", - 1383 - ] - ], - "md5": "cb6021e67d8a53ae2875fe60a0d78299", - "parent_gene": "", - "protein_md5": "0a91a9325e040d25feec5e930f5ea5a8", - "protein_translation": "MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPMVARNERLSGYAGSAGVAKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLAQQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL", - "protein_translation_length": 460, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "nadI" - ], - [ - "gene_synonym", - "JW5800" - ], - [ - "gene_synonym", - "ECK4382" - ], - [ - "gene_synonym", - "pnuA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P27278" - ], - [ - "gene_synonym", - "NP_418807.4" - ], - [ - "gene_synonym", - "GeneID:948911" - ], - [ - "gene_synonym", - "EcoGene:EG11335" - ], - [ - "gene_synonym", - "b4390" - ], - [ - "gene_synonym", - "nadR" - ], - [ - "gene_synonym", - "ASAP:ABE-0014397" - ], - [ - "gene_synonym", - "GI:90111746" - ] - ], - "dna_sequence": "ATGTCGTCATTTGATTACCTGAAAACTGCCATCAAGCAACAGGGCTGCACGCTACAGCAGGTAGCTGATGCCAGCGGTATGACCAAAGGGTATTTAAGCCAGTTACTGAATGCCAAAATCAAAAGCCCCAGCGCGCAAAAGCTGGAGGCGTTGCACCGTTTTTTGGGGCTTGAGTTTCCCCGGCAGAAGAAAACGATCGGTGTCGTATTCGGTAAGTTCTACCCACTGCATACCGGACATATCTACCTTATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGAGCAACGGCATCAAAAAGTTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAGCCGTTTTTTGTGCGTACCGTGGCGATCCTTGGCGGCGAGTCGAGCGGTAAATCCACCCTGGTAAACAAACTTGCCAATATCTTCAACACCACCAGTGCGTGGGAATATGGCCGCGATTATGTCTTTTCACACCTCGGCGGTGATGAGATCGCATTGCAGTATTCTGACTACGATAAAATCGCGCTGGGCCACGCTCAATACATTGATTTTGCGGTGAAATATGCCAATAAAGTGGCATTTATCGATACCGATTTTGTCACCACTCAGGCGTTCTGCAAAAAGTACGAAGGGCGGGAACATCCGTTCGTGCAGGCGCTGATTGATGAATACCGTTTCGATCTGGTGATCCTGCTGGAGAACAACACGCCGTGGGTGGCGGATGGTTTACGCAGCCTCGGCAGTTCGGTGGATCGCAAAGAGTTCCAGAACTTGCTGGTGGAGATGCTCGAAGAGAACAATATCGAATTTGTGCGGGTTGAAGAGGAAGATTACGACAGTCGTTTCCTGCGCTGCGTGGAACTGGTGCGGGAGATGATGGGGGAGCAGAGATAA", - 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"GI:16132208" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9W3" - ], - [ - "gene_synonym", - "GeneID:948909" - ], - [ - "gene_synonym", - "yjjK" - ], - [ - "gene_synonym", - "EcoGene:EG12343" - ], - [ - "gene_synonym", - "b4391" - ], - [ - "gene_synonym", - "ECK4383" - ], - [ - "gene_synonym", - "ASAP:ABE-0014400" - ], - [ - "gene_synonym", - "JW4354" - ] - ], - "dna_sequence": "GTGGCTCAATTCGTTTATACCATGCATCGTGTCGGCAAAGTTGTTCCGCCGAAACGTCATATTTTGAAAAACATCTCTCTGAGTTTCTTCCCTGGGGCAAAAATTGGTGTCCTGGGTCTGAATGGCGCGGGTAAGTCCACCCTGCTGCGCATTATGGCGGGCATTGATAAAGACATCGAAGGTGAAGCGCGTCCGCAGCCAGACATCAAGATTGGTTATCTGCCGCAGGAACCGCAGCTGAACCCGGAACACACCGTGCGTGAGTCCATTGAAGAAGCGGTTTCAGAAGTGGTTAACGCCCTGAAACGCCTGGATGAAGTGTATGCGCTGTACGCCGATCCGGATGCCGATTTTGACAAGCTGGCCGCTGAACAAGGCCGTCTGGAAGAGATCATTCAGGCTCACGACGGTCATAATCTGAACGTACAGCTGGAGCGTGCGGCGGATGCGCTACGTCTGCCGGACTGGGACGCGAAAATCGCTAACCTCTCCGGTGGTGAACGTCGTCGCGTAGCGTTGTGCCGCCTGCTGCTGGAAAAACCAGACATGCTGCTGCTCGACGAACCGACCAACCACCTGGATGCCGAATCCGTGGCCTGGCTGGAACGCTTCCTGCACGACTTCGAAGGCACCGTTGTGGCGATTACCCACGACCGTTACTTCCTCGATAACGTTGCAGGCTGGATCCTCGAACTTGACCGCGGTGAAGGTATTCCGTGGGAAGGTAACTACTCCTCCTGGCTGGAGCAGAAAGATCAGCGCCTGGCGCAGGAAGCTTCACAAGAAGCGGCGCGTCGTAAGTCGATTGAGAAAGAGCTGGAATGGGTACGTCAAGGTACTAAAGGCCGTCAGTCGAAAGGTAAAGCACGTCTGGCGCGCTTTGAAGAACTGAACAGCACCGAATATCAGAAACGTAACGAAACCAACGAACTGTTTATTCCACCTGGACCGCGTCTGGGCGATAAAGTGCTGGAAGTCAGCAACCTGCGTAAATCCTATGGCGATCGTCTGCTGATTGATGACCTGAGCTTCTCGATCCCGAAAGGAGCGATCGTCGGGATCATCGGTCCGAACGGTGCGGGTAAATCGACCCTGTTCCGTATGATCTCTGGTCAGGAACAGCCGGACAGCGGCACCATCACTTTGGGTGAAACGGTGAAACTGGCGTCGGTTGATCAGTTCCGTGACTCAATGGATAACAGCAAAACCGTTTGGGAAGAAGTTTCCGGCGGGCTGGATATCATGAAGATCGGCAACACCGAGATGCCAAGCCGCGCCTACGTTGGCCGCTTTAACTTTAAAGGGGTTGATCAGGGTAAACGCGTTGGTGAACTCTCCGGTGGTGAGCGCGGTCGTCTGCATCTGGCGAAGCTGCTGCAGGTTGGCGGCAACATGCTGCTGCTCGACGAACCAACCAACGACCTGGATATCGAAACCCTGCGCGCGCTGGAAAACGCCCTGCTGGAGTTCCCGGGCTGTGCGATGGTTATCTCGCACGACCGTTGGTTCCTCGACCGTATCGCCACGCACATTCTGGATTACCAGGATGAAGGTAAAGTTGAGTTCTTCGAAGGTAACTTTACCGAGTACGAAGAGTACAAGAAACGCACGCTGGGCGCAGACGCGCTGGAGCCGAAGCGTATCAAGTACAAGCGTATTGCGAAGTAA", - 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], - [ - "gene_synonym", - "NP_418809.4" - ], - [ - "gene_synonym", - "GeneID:948908" - ], - [ - "gene_synonym", - "slt" - ], - [ - "gene_synonym", - "GI:90111747" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AGC3" - ], - [ - "gene_synonym", - "b4392" - ], - [ - "gene_synonym", - "ASAP:ABE-0014404" - ], - [ - "gene_synonym", - "EcoGene:EG10950" - ], - [ - "gene_synonym", - "sltY" - ], - [ - "gene_synonym", - "JW4355" - ] - ], - "dna_sequence": "GTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCAAGCAGGCCTGGGATAATCGACAAATGGATGTGGTCGAACAAATGATGCCTGGACTGAAGGATTATCCGCTTTATCCCTACCTGGAATACCGCCAGATCACCGATGATCTGATGAATCAACCGGCGGTGACGGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCAATGTAATTACTACTATGCGAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGCGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGATCGTCGCGGCCTGAATACCTGGCTGGCGCGTCTGCCTATGGAAGCGAAAGAGAAAGATGAATGGCGTTACTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGTACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAACTGGCGCGGTATGCTTTCAACAACCAATGGTGGGATCTTAGCGTTCAGGCAACGATCGCCGGGAAGCTGTGGGATCATCTGGAAGAGCGATTCCCGCTGGCTTACAACGATCTTTTCAAACGCTACACCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGGCGATTGCTCGTCAGGAGAGCGCCTGGAATCCGAAAGTGAAATCACCGGTAGGGGCCAGCGGCTTGATGCAGATTATGCCTGGTACAGCGACCCATACGGTGAAGATGTTCTCTATTCCCGGTTATAGCAGTCCTGGGCAATTGCTGGATCCGGAAACGAATATCAACATTGGCACCAGTTACCTGCAATATGTTTATCAGCAGTTTGGCAATAATCGTATTTTCTCCTCAGCAGCTTATAACGCCGGACCAGGGCGGGTGCGAACCTGGCTTGGCAACAGCGCCGGGCGTATCGACGCAGTGGCATTTGTCGAGAGTATTCCATTCTCCGAGACGCGCGGTTATGTGAAGAACGTGCTGGCTTATGACGCTTACTACCGCTATTTCATGGGGGATAAACCGACGTTGATGAGCGCCACGGAATGGGGACGTCGTTACTGA", - 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"type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4385" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A881" - ], - [ - "gene_synonym", - "EcoGene:EG11029" - ], - [ - "gene_synonym", - "GeneID:948917" - ], - [ - "gene_synonym", - "NP_418810.1" - ], - [ - "gene_synonym", - "b4393" - ], - [ - "gene_synonym", - "ASAP:ABE-0014408" - ], - [ - "gene_synonym", - "trpR" - ], - [ - "gene_synonym", - "JW4356" - ], - [ - "gene_synonym", - "GI:16132210" - ] - ], - "dna_sequence": "ATGGCCCAACAATCACCCTATTCAGCAGCGATGGCAGAACAGCGTCACCAGGAGTGGTTACGTTTTGTCGACCTGCTTAAGAATGCCTACCAAAACGATCTCCATTTACCGTTGTTAAACCTGATGCTGACGCCAGATGAGCGCGAAGCGTTGGGGACTCGCGTGCGTATTGTCGAAGAGCTGTTGCGCGGCGAAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGA", - "dna_sequence_length": 327, - "functions": [ - "transcriptional repressor, tryptophan-binding" - ], - "id": "CDS_4309", - "location": [ - [ - "NC_000913", - 4632760, - "+", - 327 - ] - ], - "md5": "13c282e6741216b6ff1bcee0743e9c6b", - "parent_gene": "", - "protein_md5": "1129ce31eceb1fd2c2e696746fb9ebd9", - "protein_translation": "MAQQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEEVLLKSD", - "protein_translation_length": 108, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4386" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P39411" - ], - [ - "gene_synonym", - "GI:90111748" - ], - [ - "gene_synonym", - "JW5801" - ], - [ - "gene_synonym", - "yjjX" - ], - [ - "gene_synonym", - "GeneID:948919" - ], - [ - "gene_synonym", - "NP_418811.2" - ], - [ - "gene_synonym", - "b4394" - ], - [ - "gene_synonym", - "EcoGene:EG12600" - ], - [ - "gene_synonym", - "ASAP:ABE-0014411" - ] - ], - "dna_sequence": "ATGCACCAAGTTGTCTGTGCGACCACCAATCCCGCTAAAATTCAGGCCATTCTGCAGGCATTTCACGAGATCTTCGGCGAAGGATCCTGCCATATTGCATCCGTTGCCGTCGAGAGCGGTGTACCGGAACAGCCCTTTGGCAGTGAGGAAACGCGCGCTGGCGCACGAAATCGGGTAGCCAATGCCCGCCGTTTACTTCCAGAGGCTGATTTTTGGGTGGCGATTGAAGCTGGCATCGATGGTGACAGCACTTTCAGTTGGGTGGTGATTGAAAACGCCAGCCAGCGCGGCGAGGCGCGTTCGGCTACTTTGCCGTTGCCTGCGGTGATTCTGGAAAAAGTGCGTGAAGGTGAGGCGCTTGGTCCCGTGATGTCGCGTTATACCGGTATTGATGAGATTGGTCGTAAGGAAGGGGCGATCGGCGTGTTTACCGCCGGGAAACTCACTCGCGCCAGCGTCTATCACCAGGCGGTGATCCTGGCGCTGAGTCCGTTTCATAATGCCGTGTATTAA", - 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], - [ - "gene_synonym", - "EcoGene:EG11217" - ], - [ - "gene_synonym", - "creA" - ], - [ - "gene_synonym", - "yjjD" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0AE91" - ] - ], - "dna_sequence": "ATGAAATACAAGCATTTGATCCTGTCTTTAAGCCTGATAATGCTGGGGCCATTGGCTCATGCAGAAGAGATTGGTTCGGTCGACACCGTATTTAAAATGATCGGCCCGGATCACAAAATTGTTGTGGAAGCCTTTGATGATCCCGATGTGAAAAATGTCACCTGTTATGTGAGCCGGGCGAAAACCGGTGGTATTAAAGGGGGATTGGGTCTGGCGGAAGATACCTCCGATGCGGCCATTTCTTGTCAGCAAGTCGGGCCGATTGAACTGTCGGATCGTATTAAAAACGGCAAAGCTCAGGGCGAGGTAGTATTCAAAAAACGCACGTCCCTGGTCTTTAAGTCGTTACAGGTCGTGCGCTTTTATGATGCCAAACGCAACGCGCTCGCTTATCTGGCTTACTCCGACAAAGTTGTAGAAGGTTCGCCGAAAAACGCGATTAGCGCGGTTCCTGTCATGCCGTGGCGGCAATAA", - "dna_sequence_length": 474, - "functions": [ - "putative periplasmic protein" - ], - "id": "CDS_4313", - "location": [ - [ - "NC_000913", - 4635521, - "+", - 474 - ] - ], - "md5": "2afad2951fc0dbe5f19f3440afa81d2e", - "parent_gene": "", - "protein_md5": "d95d12290aaa87a91f47d25299cfb6ce", - "protein_translation": "MKYKHLILSLSLIMLGPLAHAEEIGSVDTVFKMIGPDHKIVVEAFDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDAAISCQQVGPIELSDRIKNGKAQGEVVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKVVEGSPKNAISAVPVMPWRQ", - "protein_translation_length": 157, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08368" - ], - [ - "gene_synonym", - "NP_418815.1" - ], - [ - "gene_synonym", - "ECK4390" - ], - [ - "gene_synonym", - "ORF2" - ], - [ - "gene_synonym", - "GeneID:948922" - ], - [ - "gene_synonym", - "GI:16132215" - ], - [ - "gene_synonym", - "JW4361" - ], - [ - "gene_synonym", - "EcoGene:EG11218" - ], - [ - "gene_synonym", - "creB" - ], - [ - "gene_synonym", - "ASAP:ABE-0014428" - ], - [ - "gene_synonym", - "yjjE" - ], - [ - "gene_synonym", - "b4398" - ] - ], - "dna_sequence": "ATGCAACGGGAAACGGTCTGGTTAGTGGAAGATGAGCAAGGGATAGCCGACACGCTGGTCTACATGTTGCAGCAGGAAGGTTTTGCCGTCGAGGTCTTTGAGCGAGGCTTGCCGGTGCTGGATAAAGCTCGCAAGCAGGTACCCGACGTCATGATTCTCGATGTTGGTCTGCCGGATATTAGCGGCTTTGAATTGTGCCGCCAGTTACTGGCGCTCCATCCGGCGTTACCTGTACTGTTCCTGACGGCCCGAAGTGAAGAGGTCGATCGCCTGCTTGGGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATGAGTTTTTATTGTTGAAGACGTTACTCAAGTCACCGGGCCGCGTCTGGTCCCGCCAGCAACTGATGGATAGCGTATGGGAAGATGCGCAGGACACCTACGATCGCACCGTCGATACCCACATTAAAACGCTGCGTGCCAAGCTGCGCGCCATCAACCCCGATCTTTCACCGATTAATACTCATCGCGGCATGGGATATAGCCTGAGGGGCCTGTAA", - 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"creC" - ], - [ - "gene_synonym", - "phoM" - ], - [ - "gene_synonym", - "NP_418816.1" - ], - [ - "gene_synonym", - "b4399" - ] - ], - "dna_sequence": "ATGCGTATCGGCATGCGGTTGTTGCTGGGCTATTTTTTACTGGTGGCGGTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAACATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGAGCGTAGGCAAACCGAACGCGGCGATGGCTCCGGTCATTAAGCGTAGCGAGCGGCGAATTTTATGGGCCAGCGCCATTTTGTTGGGGATTGCACTGGTGATTGGCGCAGGCATGGTTTGGTGGATCAACCGCTCTATTGCCCGGCTCACTCGCTATGCTGATTCCGTCACTGACAATAAGCCCGTTCCTCTCCCCGATCTCGGTAGTAGCGAGTTGCGTAAACTCGCGCAGGCGCTGGAAAGTATGCGCGTGAAGCTGGAAGGGAAAAACTATATTGAGCAGTATGTTTACGCATTAACTCATGAGCTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGCCGGAAGTGGTGGCTCGTTTTACTGACAACATTCTGACGCAAAATGCGCGTATGCAGGCATTGGTAGAAACGTTACTACGCCAGGCAAGACTGGAGAATCGTCAGGAAGTCGTTCTGACTGCTGTTGATGTGGCGGCATTATTCCGCCGCGTCAGCGAAGCGCGCACCGTGCAGTTGGCAGAAAAAAAAATCACTCTGCATGTTACGCCCACCGAGGTTAACGTTGCTGCTGAACCGGCGTTACTGGAGCAGGCGCTGGGAAATTTACTGGATAACGCCATCGATTTTACCCCCGAGAGCGGTTGCATCACGCTAAGCGCCGAAGTGGATCAGGAACACGTCACGCTTAAGGTGCTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCTTTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAG", - 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], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P08369" - ], - [ - "gene_synonym", - "GeneID:948868" - ], - [ - "gene_synonym", - "EcoGene:EG10145" - ], - [ - "gene_synonym", - "refII" - ], - [ - "gene_synonym", - "JW4363" - ], - [ - "gene_synonym", - "cet" - ], - [ - "gene_synonym", - "ASAP:ABE-0014432" - ], - [ - "gene_synonym", - "b4400" - ], - [ - "gene_synonym", - "GI:16132217" - ], - [ - "gene_synonym", - "creD" - ] - ], - "dna_sequence": "ATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCATTGATGGTTGATGGCAATCAGAACGTGGAAGAACGCAAGATAGGGATTTATACCGGTCAGGTCTGGCACAGTGATTTAACGTTAAAAGCCGATTTCGATGTTTCGCGTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTGGCGGAAGCAGAACCTGAAGCTGAATATGGCCCTGAATTTAAGCGGTACCGGCGATCTTTCTGTGGTGCCTGGCGGGCGTAATAGCGAAATGACCTTAACCAGCAACTGGCCGCATCCCAGTTTTTTAGGTGATTTTCTACCAGCCAAACGGGAAGTTAGCGAGTCAGGTTTTCAGGCGCACTGGCAAAGCAGCTGGTTTGCTAATAATCTCGGTGAGCGTTTTGCTTCAGGCAATGATACCGGCTGGGAAAACTTCCCGGCGTTTAGCGTCGCAGTAACGACGCCAGCCGATCAATACCAATTAACTGACCGGGCGACTAAGTACGCCATTCTGCTGATTGCACTGACTTTTATGGCGTTCTTTGTTTTTGAAACGCTCACCGCGCAACGTTTACACCCAATGCAATATTTGCTGGTGGGGCTTTCATTGGTGATGTTTTATTTGCTCTTGCTGGCGCTTTCTGAACATACCGGTTTTACCGTGGCATGGATAATCGCCAGTCTGATTGGGGCGATAATGAACGGTATTTATTTGCAAGCGGTATTGAAAGGTTGGTGCAACAGCATGTTGTTTACCCTCGCGCTGTTGTTGCTGGATGGTGTGATGTGGGGACTGCTCAACTCTGCCGATAGCGCGCTGTTGTTGGGAACCAGTGTGCTGGTGGTGGCGCTGGCCGGCATGATGTTTGTGACCCGTAATATCGACTGGTATGCGTTTTCACTGCCGAAAATGAAAGCCAGTAAAGAAGTTACAACGGACGATGAGTTACGTATCTGGAAATAA", - "dna_sequence_length": 1353, - "functions": [ - "inner membrane protein" - ], - "id": "CDS_4316", - "location": [ - [ - "NC_000913", - 4638178, - "+", - 1353 - ] - ], - "md5": "db74c6d14ab6789c4aa3979607670210", - "parent_gene": "", - "protein_md5": "4b572b134243f8d4ddd88f968e1dd010", - "protein_translation": "MLKSPLFWKMTSLFGAVLLLLIPIMLIRQVIVERADYRSDVEDAIRQSTSGPQKLVGPLIAIPVTELYTVQEEDKTVERKRSFIHFWLPESLMVDGNQNVEERKIGIYTGQVWHSDLTLKADFDVSRLSELNAPNITLGKPFIVISVGDARGIGVVKAPEVNGTALTIEPGTGLEQGGQGVHIPLPEGDWRKQNLKLNMALNLSGTGDLSVVPGGRNSEMTLTSNWPHPSFLGDFLPAKREVSESGFQAHWQSSWFANNLGERFASGNDTGWENFPAFSVAVTTPADQYQLTDRATKYAILLIALTFMAFFVFETLTAQRLHPMQYLLVGLSLVMFYLLLLALSEHTGFTVAWIIASLIGAIMNGIYLQAVLKGWCNSMLFTLALLLLDGVMWGLLNSADSALLLGTSVLVVALAGMMFVTRNIDWYAFSLPKMKASKEVTTDDELRIWK", - "protein_translation_length": 450, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ASAP:ABE-0014434" - ], - [ - "gene_synonym", - "JW4364" - ], - [ - "gene_synonym", - "ECK4393" - ], - [ - "gene_synonym", - "sfrA" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0A9Q1" - ], - [ - "gene_synonym", - "GeneID:948874" - ], - [ - "gene_synonym", - "msp" - ], - [ - "gene_synonym", - "seg" - ], - [ - "gene_synonym", - "fexA" - ], - [ - "gene_synonym", - "NP_418818.1" - ], - [ - "gene_synonym", - "arcA" - ], - [ - "gene_synonym", - "b4401" - ], - [ - "gene_synonym", - "GI:16132218" - ], - [ - "gene_synonym", - "dye" - ], - [ - "gene_synonym", - "cpxC" - ], - [ - "gene_synonym", - "EcoGene:EG10061" - ] - ], - "dna_sequence": "ATGCAGACCCCGCACATTCTTATCGTTGAAGACGAGTTGGTAACACGCAACACGTTGAAAAGTATTTTCGAAGCGGAAGGCTATGATGTTTTCGAAGCGACAGATGGCGCGGAAATGCATCAGATCCTCTCTGAATATGACATCAACCTGGTGATCATGGATATCAATCTGCCGGGTAAGAACGGTCTTCTGTTAGCGCGTGAACTGCGCGAGCAGGCGAATGTTGCGTTGATGTTCCTGACTGGCCGTGACAACGAAGTCGATAAAATTCTCGGCCTCGAAATCGGTGCAGATGACTACATCACCAAACCGTTCAACCCGCGTGAACTGACGATTCGTGCACGCAACCTACTGTCCCGTACCATGAATCTGGGTACTGTCAGCGAAGAACGTCGTAGCGTTGAAAGCTACAAGTTCAATGGTTGGGAACTGGACATCAACAGCCGTTCGTTGATCGGCCCTGATGGCGAGCAGTACAAGCTGCCGCGCAGCGAGTTCCGCGCCATGCTTCACTTCTGTGAAAACCCAGGCAAAATTCAGTCCCGTGCTGAACTGCTGAAGAAAATGACCGGCCGTGAGCTGAAACCGCACGACCGTACTGTAGACGTGACGATCCGCCGTATTCGTAAACATTTCGAATCTACGCCGGATACGCCGGAAATCATCGCCACCATTCACGGTGAAGGTTATCGCTTCTGCGGTGATCTGGAAGATTAA", - "dna_sequence_length": 717, - "functions": [ - "response regulator in two-component regulatory system with ArcB or CpxA" - ], - "id": "CDS_4317", - "location": [ - [ - "NC_000913", - 4640306, - "-", - 717 - ] - ], - "md5": "e452b8943ecd4b5e38543fbe36db1b29", - "parent_gene": "", - "protein_md5": "1917eff55d421295934a3e3ab9e8c178", - "protein_translation": "MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED", - "protein_translation_length": 238, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4394" - ], - [ - "gene_synonym", - "NP_418819.1" - ], - [ - "gene_synonym", - "yjjY" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P0ADD9" - ], - [ - "gene_synonym", - "GeneID:948925" - ], - [ - "gene_synonym", - "ASAP:ABE-0014437" - ], - [ - "gene_synonym", - "b4402" - ], - [ - "gene_synonym", - "GI:16132219" - ], - [ - "gene_synonym", - "JW4365" - ], - [ - "gene_synonym", - "EcoGene:EG12601" - ] - ], - "dna_sequence": "ATGACTAAAGTACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAA", - "dna_sequence_length": 141, - "functions": [ - "uncharacterized protein" - ], - "id": "CDS_4318", - "location": [ - [ - "NC_000913", - 4640402, - "+", - 141 - ] - ], - "md5": "774c8ad4517921114a55c82b4917d9a6", - "parent_gene": "", - "protein_md5": "833365d3c81d8fff0f42f49ee69d9fa9", - "protein_translation": "MTKVRNCVLDALSINVNNIISLVVGTFPQDPTVSKTAVILTILTAT", - "protein_translation_length": 46, - "type": "CDS" - }, - { - "aliases": [ - [ - "gene_synonym", - "ECK4395" - ], - [ - "gene_synonym", - "lasT" - ], - [ - "gene_synonym", - "yjtD" - ], - [ - "gene_synonym", - "NP_418820.1" - ], - [ - "gene_synonym", - "GeneID:948924" - ], - [ - "gene_synonym", - "EcoGene:EG12309" - ], - [ - "gene_synonym", - "ASAP:ABE-0014442" - ], - [ - "gene_synonym", - "b4403" - ], - [ - "gene_synonym", - "GI:16132220" - ], - [ - "gene_synonym", - "JW4366" - ], - [ - "gene_synonym", - "UniProtKB/Swiss-Prot:P37005" - ] - ], - "dna_sequence": "ATGCGTATAACGATTATTCTGGTCGCACCCGCCAGAGCAGAAAATATTGGGGCAGCGGCGCGGGCAATGAAAACGATGGGGTTTAGCGATCTGCGGATTGTCGATAGTCAGGCACACCTGGAGCCAGCCACCCGCTGGGTCGCACATGGATCTGGTGATATTATTGATAATATTAAAGTTTTCCCGACATTGGCTGAATCGTTACACGATGTCGATTTCACTGTCGCCACCACTGCGCGCAGTCGGGCGAAATATCATTACTACGCCACGCCAGTTGAACTGGTGCCGCTGTTAGAGGAAAAATCTTCATGGATGAGCCATGCCGCGCTGGTGTTTGGTCGCGAAGATTCCGGGTTGACTAACGAAGAGTTAGCGTTGGCTGACGTTCTTACTGGTGTGCCGATGGTGGCGGATTATCCTTCGCTCAATCTGGGGCAGGCGGTGATGGTCTATTGCTATCAATTAGCAACATTAATACAACAACCGGCGAAAAGTGATGCAACGGCAGACCAACATCAACTGCAAGCTTTACGCGAACGAGCCATGACATTGCTGACGACTCTGGCAGTGGCAGATGACATAAAACTGGTCGACTGGTTACAACAACGCCTGGGGCTTTTAGAGCAACGAGACACGGCAATGTTGCACCGTTTGCTGCATGATATTGAAAAAAATATCACCAAATAA", - "dna_sequence_length": 687, - "functions": [ - "putative methyltransferase" - ], - "id": "CDS_4319", - "location": [ - [ - "NC_000913", - 4640942, - "+", - 687 - ] - ], - "md5": "bb3b817ca5149195111092e3115eca06", - "parent_gene": "", - "protein_md5": "c75e37d0bd96316e92f64e8a61352941", - "protein_translation": "MRITIILVAPARAENIGAAARAMKTMGFSDLRIVDSQAHLEPATRWVAHGSGDIIDNIKVFPTLAESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLTNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQQPAKSDATADQHQLQALRERAMTLLTTLAVADDIKLVDWLQQRLGLLEQRDTAMLHRLLHDIEKNITK", - "protein_translation_length": 228, - "type": "CDS" - } - ], - "dna_size": 4641652, - "domain": "Bacteria", - "external_source_origination_date": "16-DEC-2014", - "feature_counts": { - "CDS": 4319, - "mRNA": 0, - "non_coding_features": 0, - "protein_encoding_gene": 0 - }, - "features": [], - "gc_content": 0.50791, - "genetic_code": 11, - "genome_tiers": [ - "ExternalDB" - ], - "genome_type": "Unknown", - "id": "Escherichia_coli_str_K_12_substr_MG1655_RefSeq", - "md5": "afd67f98d72869f1e5b943aa9efd72af", - "molecule_type": "Unknown", - "mrnas": [], - "non_coding_features": [], - "num_contigs": 1, - "original_source_file_name": "GCF_000005845.2_ASM584v2_genomic.gbff", - "publications": [ - [ - 16397293, - "PubMed", - "Escherichia coli K-12: a cooperatively developed annotation snapshot--2005", - "http://www.ncbi.nlm.nih.gov/pubmed/16397293", - "2006", - "Riley,M., Abe,T., Arnaud,M.B., Berlyn,M.K., Blattner,F.R., Chaudhuri,R.R., Glasner,J.D., Horiuchi,T., Keseler,I.M., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Rudd,K.E., Serres,M.H., Thomas,G.H., Thomson,N.R., Wishart,D. and Wanner,B.L.", - "Nucleic Acids Res. 34 (1), 1-9 (2006)" - ], - [ - 0, - "", - "Direct Submission", - "", - "15-NOV-2013", - "Blattner,F.R. and Plunkett,G. III.", - "Submitted (15-NOV-2013) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" - ], - [ - 0, - "", - "Direct Submission", - "", - "02-SEP-1997", - "Blattner,F.R. and Plunkett,G. III.", - "Submitted (02-SEP-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" - ], - [ - 0, - "", - "A more accurate sequence comparison between genomes of Escherichia coli K12 W3110 and MG1655 strains", - "", - "", - "Hayashi,K., Morooka,N., Mori,H. and Horiuchi,T.", - "Unpublished" - ], - [ - 0, - "", - "Direct Submission", - "", - "30-JUL-2014", - "Blattner,F.R. and Plunkett,G. III.", - "Submitted (30-JUL-2014) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" - ], - [ - 0, - "", - "Direct Submission", - "", - "10-JUN-2004", - "Plunkett,G. III.", - "Submitted (10-JUN-2004) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" - ], - [ - 0, - "", - "Direct Submission", - "", - "06-FEB-2013", - "Rudd,K.E.", - "Submitted (06-FEB-2013) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA" - ], - [ - 0, - "", - "Direct Submission", - "", - "07-FEB-2006", - "Plunkett,G. III.", - "Submitted (07-FEB-2006) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" - ], - [ - 0, - "", - "Workshop on Annotation of Escherichia coli K-12", - "", - "", - "Arnaud,M., Berlyn,M.K.B., Blattner,F.R., Galperin,M.Y., Glasner,J.D., Horiuchi,T., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Riley,M., Rudd,K.E., Serres,M.H., Thomas,G.H. and Wanner,B.L.", - "Unpublished" - ], - [ - 0, - "", - "Direct Submission", - "", - "26-SEP-2013", - "Blattner,F.R. and Plunkett,G. III.", - "Submitted (26-SEP-2013) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" - ], - [ - 9278503, - "PubMed", - "The complete genome sequence of Escherichia coli K-12", - "http://www.ncbi.nlm.nih.gov/pubmed/9278503", - "1997", - "Blattner,F.R., Plunkett,G. III, Bloch,C.A., Perna,N.T., Burland,V., Riley,M., Collado-Vides,J., Glasner,J.D., Rode,C.K., Mayhew,G.F., Gregor,J., Davis,N.W., Kirkpatrick,H.A., Goeden,M.A., Rose,D.J., Mau,B. and Shao,Y.", - "Science 277 (5331), 1453-1462 (1997)" - ], - [ - 0, - "NCBI Genome Project", - "Direct Submission", - "", - "26-AUG-2014", - "", - "Submitted (26-AUG-2014) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA" - ], - [ - 0, - "", - "Direct Submission", - "", - "16-JAN-1997", - "Blattner,F.R. and Plunkett,G. III.", - "Submitted (16-JAN-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" - ], - [ - 16738553, - "PubMed", - "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110", - "http://www.ncbi.nlm.nih.gov/pubmed/16738553", - "2006", - "Hayashi,K., Morooka,N., Yamamoto,Y., Fujita,K., Isono,K., Choi,S., Ohtsubo,E., Baba,T., Wanner,B.L., Mori,H. and Horiuchi,T.", - "Mol. Syst. Biol. 2, 2006 (2006)" - ], - [ - 0, - "", - "ASAP: Escherichia coli K-12 strain MG1655 version m56", - "", - "", - "Glasner,J.D., Perna,N.T., Plunkett,G. III, Anderson,B.D., Bockhorst,J., Hu,J.C., Riley,M., Rudd,K.E. and Serres,M.H.", - "Unpublished" - ], - [ - 0, - "", - "Escherichia coli K-12 MG1655 yqiK-rfaE intergenic region, genomic sequence correction", - "", - "", - "Perna,N.T.", - "Unpublished" - ], - [ - 0, - "", - "Direct Submission", - "", - "13-OCT-1998", - "Plunkett,G. III.", - "Submitted (13-OCT-1998) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" - ], - [ - 0, - "", - "Direct Submission", - "", - "24-APR-2007", - "Rudd,K.E.", - "Submitted (24-APR-2007) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA" - ], - [ - 0, - "", - "A manual approach to accurate translation start site annotation: an E. coli K-12 case study", - "", - "", - "Rudd,K.E.", - "Unpublished" - ] - ], - "reference_annotation": 0, - "scientific_name": "Escherichia coli str. K-12 substr. MG1655", - "source": "RefSeq", - "source_id": "NC_000913", - "taxonomy": "cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli K-12", - "type": "reference_test", - "warnings": [ - "For prokaryotes, CDS array should generally be the same length as the Features array.", - "Genome molecule_type Unknown is not expected for domain Bacteria.", - "Unable to determine organism taxonomy" - ] -} \ No newline at end of file diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 76d213b1..76e88668 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -263,9 +263,9 @@ def yest_one_genome_with_hidden(self): self.check_genome_info(ret, genome_name) self.check_hidden(genome_name) - def _setup_handle(self): + def _setup_handle(self, file_name): # Save genome file to scratch dir - file_path = os.path.join(self.scratch, "e_coli_with_assembly.json") + file_path = os.path.join(self.scratch, file_name) with open(file_path, "w") as f: json.dump(self.test_genome_data, f, indent=4) @@ -282,12 +282,13 @@ def _setup_handle(self): def test_genomes(self): self.start_test() - genome_with_handle_ref = self._setup_handle() + genome_name1 = 'e_coli_with_assembly_1.json' + genome_name2 = 'e_coli_with_assembly_2.json' - genome_name1 = 'test_genome_1' - genome_name2 = 'test_genome_2' + genome_with_handle_ref_1 = self._setup_handle(genome_name1) + genome_with_handle_ref_2 = self._setup_handle(genome_name2) - genome_names = [genome_name1, genome_name2] + file_names = [genome_name1, genome_name2] genome_metas = [ { @@ -341,12 +342,12 @@ def test_genomes(self): inputs = [ { 'name': genome_name1, - 'data': genome_with_handle_ref, + 'data': genome_with_handle_ref_1, 'meta': {"foo": "zoo"} }, { 'name': genome_name2, - 'data': genome_with_handle_ref, + 'data': genome_with_handle_ref_2, 'meta': {"zoo": "foo"} } ] @@ -356,7 +357,7 @@ def test_genomes(self): # check genome result check_result_object_info_provenance_data( results, - genome_names, + file_names, self.scratch, self.wsClient, self.hs, From 306ae55d234d83719cd4e0d7f3667e0146237ca0 Mon Sep 17 00:00:00 2001 From: Sijie Xiang Date: Tue, 10 Jun 2025 20:51:44 +0000 Subject: [PATCH 39/70] upload expected_genome_data --- .../e_coli/e_coli_with_assembly_curated.json | 288028 +++++++++++++++ 1 file changed, 288028 insertions(+) create mode 100644 test/data/e_coli/e_coli_with_assembly_curated.json diff --git a/test/data/e_coli/e_coli_with_assembly_curated.json b/test/data/e_coli/e_coli_with_assembly_curated.json new file mode 100644 index 00000000..c268fd8a --- /dev/null +++ b/test/data/e_coli/e_coli_with_assembly_curated.json @@ -0,0 +1,288028 @@ +{ + "cdss": [ + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000006" + ], + [ + "gene_synonym", + "ECK0001" + ], + [ + "gene_synonym", + "EcoGene:EG11277" + ], + [ + "gene_synonym", + "GI:16127995" + ], + [ + "gene_synonym", + "GeneID:944742" + ], + [ + "gene_synonym", + "JW4367" + ], + [ + "gene_synonym", + "NP_414542.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD86" + ], + [ + "gene_synonym", + "b0001" + ], + [ + "gene_synonym", + "thrL" + ] + ], + "dna_sequence": "ATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGA", + "dna_sequence_length": 66, + "functions": [ + "thr operon leader peptide" + ], + "id": "CDS_1", + "location": [ + [ + "NC_000913", + 190, + "+", + 66 + ] + ], + "md5": "cd572f0df722f00fc2123c68f381b98b", + "parent_gene": "", + "protein_md5": "13fe4258b37e32edda386faa50ec5fdf", + "protein_translation": "MKRISTTITTTITITTGNGAG", + "protein_translation_length": 21, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000008" + ], + [ + "gene_synonym", + "ECK0002" + ], + [ + "gene_synonym", + "EcoGene:EG10998" + ], + [ + "gene_synonym", + "GI:16127996" + ], + [ + "gene_synonym", + "GeneID:945803" + ], + [ + "gene_synonym", + "Hs" + ], + [ + "gene_synonym", + "JW0001" + ], + [ + "gene_synonym", + "NP_414543.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00561" + ], + [ + "gene_synonym", + "b0002" + ], + [ + "gene_synonym", + "thrA" + ], + [ + "gene_synonym", + "thrA1" + ], + [ + "gene_synonym", + "thrA2" + ], + [ + "gene_synonym", + "thrD" + ] + ], + "dna_sequence": "ATGCGAGTGTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAGAACGTTTTCTGCGTGTTGCCGATATTCTGGAAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTCTCTGCCCCCGCCAAAATCACCAACCACCTGGTGGCGATGATTGAAAAAACCATTAGCGGCCAGGATGCTTTACCCAATATCAGCGATGCCGAACGTATTTTTGCCGAACTTTTGACGGGACTCGCCGCCGCCCAGCCGGGGTTCCCGCTGGCGCAATTGAAAACTTTCGTCGATCAGGAATTTGCCCAAATAAAACATGTCCTGCATGGCATTAGTTTGTTGGGGCAGTGCCCGGATAGCATCAACGCTGCGCTGATTTGCCGTGGCGAGAAAATGTCGATCGCCATTATGGCCGGCGTATTAGAAGCGCGCGGTCACAACGTTACTGTTATCGATCCGGTCGAAAAACTGCTGGCAGTGGGGCATTACCTCGAATCTACCGTCGATATTGCTGAGTCCACCCGCCGTATTGCGGCAAGCCGCATTCCGGCTGATCACATGGTGCTGATGGCAGGTTTCACCGCCGGTAATGAAAAAGGCGAACTGGTGGTGCTTGGACGCAACGGTTCCGACTACTCTGCTGCGGTGCTGGCTGCCTGTTTACGCGCCGATTGTTGCGAGATTTGGACGGACGTTGACGGGGTCTATACCTGCGACCCGCGTCAGGTGCCCGATGCGAGGTTGTTGAAGTCGATGTCCTACCAGGAAGCGATGGAGCTTTCCTACTTCGGCGCTAAAGTTCTTCACCCCCGCACCATTACCCCCATCGCCCAGTTCCAGATCCCTTGCCTGATTAAAAATACCGGAAATCCTCAAGCACCAGGTACGCTCATTGGTGCCAGCCGTGATGAAGACGAATTACCGGTCAAGGGCATTTCCAATCTGAATAACATGGCAATGTTCAGCGTTTCTGGTCCGGGGATGAAAGGGATGGTCGGCATGGCGGCGCGCGTCTTTGCAGCGATGTCACGCGCCCGTATTTCCGTGGTGCTGATTACGCAATCATCTTCCGAATACAGCATCAGTTTCTGCGTTCCACAAAGCGACTGTGTGCGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAGCCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACCTTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTCGCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCGACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTGTTTGTGATTGGCGTCGGTGGCGTTGGCGGTGCGCTGCTGGAGCAACTGAAGCGTCAGCAAAGCTGGCTGAAGAATAAACATATCGACTTACGTGTCTGCGGTGTTGCCAACTCGAAGGCTCTGCTCACCAATGTACATGGCCTTAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCCAAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAACCCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTGCGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTACTACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAACGTTGGGGCTGGATTACCGGTTATTGAGAACCTGCAAAATCTGCTCAATGCAGGTGATGAATTGATGAAGTTCTCCGGCATTCTTTCTGGTTCGCTTTCTTATATCTTCGGCAAGTTAGACGAAGGCATGAGTTTCTCCGAGGCGACCACGCTGGCGCGGGAAATGGGTTATACCGAACCGGACCCGCGAGATGATCTTTCTGGTATGGATGTGGCGCGTAAACTATTGATTCTCGCTCGTGAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTGCCCGCAGAGTTTAACGCCGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAACTCGACGATCTCTTTGCCGCGCGCGTGGCGAAGGCCCGTGATGAAGGAAAAGTTTTGCGCTATGTTGGCAATATTGATGAAGATGGCGTCTGCCGCGTGAAGATTGCCGAAGTGGATGGTAATGATCCGCTGTTCAAAGTGAAAAATGGCGAAAACGCCCTGGCCTTCTATAGCCACTATTATCAGCCGCTGCCGTTGGTACTGCGCGGATATGGTGCGGGCAATGACGTTACAGCTGCCGGTGTCTTTGCTGATCTGCTACGTACCCTCTCATGGAAGTTAGGAGTCTGA", + "dna_sequence_length": 2463, + "functions": [ + "Bifunctional aspartokinase/homoserine dehydrogenase 1" + ], + "id": "CDS_2", + "location": [ + [ + "NC_000913", + 337, + "+", + 2463 + ] + ], + "md5": "20d5afda58d5cfdaa163c62921443e25", + "parent_gene": "", + "protein_md5": "0f66dc2b3024a9739d0e912fde12b8ba", + "protein_translation": 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"UniProtKB/Swiss-Prot:P0AF03" + ], + [ + "gene_synonym", + "b0009" + ], + [ + "gene_synonym", + "bisD" + ], + [ + "gene_synonym", + "chlG" + ], + [ + "gene_synonym", + "mog" + ], + [ + "gene_synonym", + "mogA" + ], + [ + "gene_synonym", + "yaaG" + ] + ], + "dna_sequence": "ATGAATACTTTACGTATTGGCTTAGTTTCCATCTCTGATCGCGCATCCAGCGGCGTTTATCAGGATAAAGGCATCCCTGCGCTGGAAGAATGGCTGACATCGGCGCTAACCACGCCGTTTGAACTGGAAACCCGCTTAATCCCCGATGAGCAGGCGATCATCGAGCAAACGTTGTGTGAGCTGGTGGATGAAATGAGTTGCCATCTGGTGCTCACCACGGGCGGAACTGGCCCGGCGCGTCGTGACGTAACGCCCGATGCGACGCTGGCAGTAGCGGACCGCGAGATGCCTGGCTTTGGTGAACAGATGCGCCAGATCAGCCTGCATTTTGTACCAACTGCGATCCTTTCGCGTCAGGTGGGCGTGATTCGCAAACAGGCGCTGATCCTTAACTTACCCGGTCAGCCGAAGTCTATTAAAGAGACGCTGGAAGGTGTGAAGGACGCTGAGGGTAACGTTGTGGTACACGGTATTTTTGCCAGCGTACCGTACTGCATTCAGTTGCTGGAAGGGCCATACGTTGAAACGGCACCGGAAGTGGTTGCAGCATTCAGACCGAAGAGTGCAAGACGCGACGTTAGCGAATAA", + "dna_sequence_length": 588, + "functions": [ + "molybdochelatase incorporating molybdenum into molybdopterin" + ], + "id": "CDS_9", + 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"b0032" + ], + [ + "gene_synonym", + "cap" + ], + [ + "gene_synonym", + "carA" + ], + [ + "gene_synonym", + "pyrA" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "GeneID:944775" + ], + [ + "gene_synonym", + "JW0031" + ], + [ + "gene_synonym", + "NP_414574.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00968" + ], + [ + "gene_synonym", + "b0033" + ], + [ + "gene_synonym", + "cap" + ], + [ + "gene_synonym", + "carB" + ], + [ + "gene_synonym", + "pyrA" + ] + ], + "dna_sequence": 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"MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK", 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transcriptional activator" + ], + "id": "CDS_33", + "location": [ + [ + "NC_000913", + 34300, + "+", + 396 + ] + ], + "md5": "f13223163c7d85237656defaa37a4ba7", + "parent_gene": "", + "protein_md5": "61d804f5e6839c42806f4d4e18fd3c6d", + "protein_translation": "MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR", + "protein_translation_length": 131, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000128" + ], + [ + "gene_synonym", + "ECK0036" + ], + [ + "gene_synonym", + "EcoGene:EG12608" + ], + [ + "gene_synonym", + "GI:90111080" + ], + [ + "gene_synonym", + "GeneID:948999" + ], + [ + "gene_synonym", + "JW5004" + ], + [ + "gene_synonym", + "NP_414577.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39206" + ], + [ + "gene_synonym", + "b0035" + ], + [ + "gene_synonym", + "caiE" + ] + ], + "dna_sequence": "GTGAGCTATTACGCCTTTGAGGGGTTAATTCCGGTGGTTCACCCGACGGCGTTTGTCCATCCCAGTGCCGTCTTGATTGGCGATGTGATTGTGGGAGCCGGTGTCTACATCGGCCCACTCGCCTCACTGCGTGGTGACTACGGGCGGTTGATCGTGCAAGCGGGAGCCAATATTCAGGATGGCTGCATTATGCATGGCTACTGCGACACTGACACTATCGTTGGGGAAAACGGCCATATCGGGCACGGAGCGATCCTGCATGGTTGTTTGATTGGTCGCGATGCATTGGTCGGGATGAACAGCGTGATTATGGATGGCGCGGTCATTGGCGAAGAGAGCATTGTTGCCGCCATGAGCTTTGTCAAAGCGGGCTTTCGCGGCGAGAAACGCCAGTTGTTGATGGGTACGCCAGCCCGCGCTGTACGCAATGTTAGTGACGACGAGTTACACTGGAAACGGTTGAATACCAAAGAGTATCAGGATCTTGTCGGGCGCTGTCATGTATCGTTACATGAAACGCAGCCACTGAGGCAAATGGAGGAAAATCGCCCCCGTTTGCAGGGGACGACGGATGTGACGCCTAAACGGTGA", + "dna_sequence_length": 591, + "functions": [ + "stimulator of CaiD and CaiB enzyme activities" + ], + "id": "CDS_34", + "location": [ + [ + "NC_000913", + 35371, + "-", + 591 + ] + ], + "md5": "e8437dd8a9320af122b7690a5f102577", + "parent_gene": "", + "protein_md5": "ae7caab41013348183df893ed0613591", + "protein_translation": "MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCLIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDLVGRCHVSLHETQPLRQMEENRPRLQGTTDVTPKR", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000130" + ], + [ + "gene_synonym", + "ECK0037" + ], + [ + "gene_synonym", + "EcoGene:EG11557" + ], + [ + "gene_synonym", + "GI:221800779" + ], + [ + "gene_synonym", + "GeneID:948995" + ], + [ + "gene_synonym", + "JW0035" + ], + [ + "gene_synonym", + "NP_414578.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31551" + ], + [ + "gene_synonym", + "b0036" + ], + [ + "gene_synonym", + "caiD" + ], + [ + "gene_synonym", + "yaaL" + ] + ], + "dna_sequence": 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"6ef2e64a3eb6c05f537c6cb72ae4f783", + "parent_gene": "", + "protein_md5": "d9c8f73871e078c879e4ff865e64a61d", + "protein_translation": "MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000133" + ], + [ + "gene_synonym", + "ECK0038" + ], + [ + "gene_synonym", + "EcoGene:EG11558" + ], + [ + "gene_synonym", + "GI:221800780" + ], + [ + "gene_synonym", + "GeneID:944886" + ], + [ + "gene_synonym", + "JW0036" + ], + [ + "gene_synonym", + "NP_414579.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31552" + ], + [ + "gene_synonym", + "b0037" + ], + [ + "gene_synonym", + "caiC" + ], + [ + "gene_synonym", + "yaaM" + ] + ], + "dna_sequence": "ATGGATATCATTGGCGGACAACATCTACGTCAAATGTGGGACGATCTTGCGGACGTTTACGGTCATAAAACGGCGCTGATTTGTGAATCCAGCGGCGGAGTCGTTAACCGGTATAGTTATCTTGAGTTAAATCAGGAGATTAACCGCACGGCAAACCTGTTTTATACGCTGGGGATTCGCAAAGGCGACAAGGTTGCACTACATCTCGACAACTGCCCGGAATTTATCTTTTGCTGGTTCGGGCTGGCAAAAATTGGCGCGATTATGGTGCCGATTAACGCCCGCCTGTTGTGCGAGGAAAGCGCGTGGATCCTGCAAAATAGCCAGGCGTGCCTGCTGGTGACCAGTGCGCAATTCTATCCTATGTATCAACAGATTCAGCAGGAAGATGCCACTCAATTGCGGCACATTTGCCTGACAGATGTGGCACTTCCCGCTGATGATGGCGTGAGTTCGTTTACTCAACTGAAAAATCAACAACCTGCCACCTTGTGCTATGCACCGCCGCTATCGACTGACGATACGGCGGAAATTCTCTTCACCTCCGGCACCACCTCCCGACCGAAAGGTGTGGTGATTACCCATTACAACCTGCGCTTCGCTGGATATTACTCCGCCTGGCAGTGTGCACTGCGTGACGATGACGTCTACCTGACGGTAATGCCTGCGTTTCATATCGATTGCCAGTGTACTGCGGCGATGGCGGCGTTTTCTGCCGGGGCCACCTTTGTGCTGGTCGAGAAATACAGCGCCCGCGCCTTCTGGGGACAGGTACAGAAGTACCGCGCCACCGTTACCGAATGTATTCCGATGATGATCCGTACGTTGATGGTACAGCCGCCTTCAGCGAACGATCAGCAACACCGCCTGCGGGAAGTGATGTTTTATCTCAACTTGTCGGAGCAGGAAAAAGATGCGTTTTGTGAACGCTTCGGCGTTCGCTTGCTGACGTCTTATGGGATGACGGAAACCATTGTGGGCATTATCGGCGATCGTCCTGGCGATAAACGACGCTGGCCGTCGATTGGTCGGGTGGGGTTTTGCTACGAAGCGGAGATCCGCGACGATCACAATCGCCCGCTCCCGGCTGGTGAGATCGGTGAAATCTGCATTAAAGGCATACCTGGGAAAACCATCTTCAAAGAGTACTTTCTCAACCCACAAGCCACTGCGAAAGTGCTGGAAGCCGATGGCTGGCTGCATACCGGCGATACCGGATACCGCGACGAAGAGGACTTTTTTTATTTCGTCGATCGCCGCTGCAATATGATTAAACGTGGCGGCGAGAATGTCTCCTGCGTGGAGCTGGAAAATATTATCGCCGCGCACCCGAAAATTCAGGACATCGTGGTTGTGGGTATTAAAGATTCGATTCGCGATGAAGCCATCAAAGCATTTGTGGTGCTGAATGAAGGTGAAACATTGAGCGAAGAGGAATTTTTCCGCTTCTGCGAACAAAATATGGCGAAATTTAAAGTGCCCTCTTATCTGGAGATCAGAAAAGATCTGCCACGTAATTGCTCGGGGAAAATAATTAGAAAGAATCTGAAATAA", 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"MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ", + "protein_translation_length": 968, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000202" + ], + [ + "gene_synonym", + "ECK0061" + ], + [ + "gene_synonym", + "EcoGene:EG10747" + ], + [ + "gene_synonym", + "GI:16128054" + ], + [ + "gene_synonym", + "GeneID:944779" + ], + [ + "gene_synonym", + "JW0059" + ], + [ + "gene_synonym", + "NP_414602.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21189" + ], + [ + "gene_synonym", + "b0060" + ], + [ + "gene_synonym", + "dinA" + ], + [ + "gene_synonym", + "polB" + ] + ], + "dna_sequence": "GTGGCGCAGGCAGGTTTTATCTTAACCCGACACTGGCGGGACACCCCGCAAGGGACAGAAGTCTCCTTCTGGCTGGCGACGGACAACGGGCCGTTGCAGGTTACGCTTGCACCGCAAGAGTCCGTGGCGTTTATTCCCGCCGATCAGGTTCCCCGCGCTCAGCATATTTTGCAGGGTGAACAAGGCTTTCGCCTGACACCGCTGGCGTTAAAGGATTTTCACCGCCAGCCGGTGTATGGCCTTTACTGTCGCGCCCATCGCCAATTGATGAATTACGAAAAGCGCCTGCGTGAAGGTGGCGTTACCGTCTACGAGGCCGATGTGCGTCCGCCAGAACGCTATCTGATGGAGCGGTTTATCACCTCACCGGTGTGGGTCGAGGGTGATATGCACAATGGCACTATCGTTAATGCCCGTCTGAAACCGCATCCCGACTATCGTCCGCCGCTCAAGTGGGTTTCTATAGATATTGAAACCACCCGCCACGGTGAGCTGTACTGCATCGGCCTGGAAGGCTGCGGGCAGCGCATCGTTTATATGCTGGGGCCGGAGAATGGCGACGCCTCCTCGCTTGATTTCGAACTGGAATACGTCGCCAGCCGCCCGCAGTTGCTGGAAAAACTCAACGCCTGGTTTGCCAACTACGATCCTGATGTGATCATCGGTTGGAACGTGGTGCAGTTCGATCTGCGAATGCTGCAAAAACATGCCGAGCGTTACCGTCTTCCGCTGCGTCTTGGGCGCGATAATAGCGAGCTGGAGTGGCGCGAGCACGGCTTTAAAAACGGCGTCTTTTTTGCCCAGGCTAAAGGTCGGCTAATTATCGACGGTATCGAGGCGCTGAAATCCGCGTTCTGGAATTTCTCTTCATTCTCGCTGGAAACTGTCGCTCAGGAGCTATTAGGCGAAGGAAAATCTATCGATAACCCGTGGGATCGAATGGACGAAATTGACCGCCGTTTCGCCGAAGATAAACCTGCGCTGGCAACTTATAACCTGAAAGATTGCGAGCTGGTGACGCAGATCTTCCACAAAACTGAAATCATGCCATTTTTACTCGAACGGGCAACGGTGAACGGCCTGCCGGTGGACCGACACGGCGGTTCGGTGGCGGCATTTGGTCATCTCTATTTTCCGCGAATGCATCGCGCTGGTTATGTCGCGCCTAATCTCGGCGAAGTGCCGCCGCACGCCAGCCCTGGCGGCTACGTGATGGATTCACGGCCAGGGCTTTATGATTCAGTGCTGGTGCTGGACTATAAAAGCCTGTACCCGTCGATCATCCGCACCTTTCTGATTGATCCCGTCGGGCTGGTGGAAGGCATGGCGCAGCCTGATCCAGAGCACAGTACCGAAGGTTTTCTCGATGCCTGGTTCTCGCGAGAAAAACATTGCCTGCCGGAGATTGTGACTAACATCTGGCACGGGCGCGATGAAGCCAAACGCCAGGGTAACAAACCGCTGTCGCAGGCGCTGAAAATCATCATGAATGCCTTTTATGGCGTGCTCGGCACCACCGCCTGCCGCTTCTTCGATCCGCGGCTGGCATCGTCGATCACCATGCGTGGTCATCAGATCATGCGGCAAACCAAAGCGTTGATTGAAGCACAGGGCTACGACGTTATCTACGGCGATACCGACTCAACGTTTGTCTGGCTGAAAGGCGCACATTCGGAAGAAGAAGCGGCGAAAATCGGTCGTGCACTGGTGCAGCACGTTAACGCCTGGTGGGCGGAAACGCTGCAAAAACAACGGCTGACCAGCGCATTAGAACTGGAGTATGAAACCCATTTCTGCCGTTTTCTGATGCCAACCATTCGCGGAGCCGATACCGGCAGTAAAAAGCGTTATGCCGGACTGATTCAGGAGGGCGACAAGCAGCGGATGGTGTTTAAAGGGCTGGAAACCGTGCGCACCGACTGGACGCCGCTGGCCCAGCAGTTTCAGCAGGAGCTATACCTGCGCATCTTCCGCAACGAGCCATATCAGGAATATGTACGCGAAACCATCGACAAACTGATGGCGGGTGAACTGGATGCGCGACTGGTTTACCGTAAACGCCTTCGCCGTCCGCTGAGCGAGTATCAGCGTAATGTGCCGCCTCATGTACGCGCCGCTCGCCTTGCCGATGAAGAAAACCAAAAGCGTGGTCGCCCCTTGCAATATCAGAATCGCGGCACCATTAAGTACGTATGGACCACCAACGGCCCGGAGCCGCTGGACTACCAACGTTCACCACTGGATTACGAACACTATCTGACCCGCCAGCTACAACCCGTGGCGGAGGGAATACTCCCTTTTATTGAGGATAATTTTGCTACACTTATGACCGGGCAACTTGGGCTATTTTGA", 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"MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAFIPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVTVYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETTRHGELYCIGLEGCGQRIVYMLGPENGDASSLDFELEYVASRPQLLEKLNAWFANYDPDVIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIIDGIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHSTEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTACRFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIGRALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEGDKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARLVYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPLDYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF", + "protein_translation_length": 783, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000209" + ], + [ + "gene_synonym", + "ECK0062" + ], + [ + "gene_synonym", + "EcoGene:EG10055" + ], + [ + "gene_synonym", + "GI:16128055" + ], + [ + "gene_synonym", + "GeneID:945294" + ], + [ + "gene_synonym", + "JW0060" + ], + [ + "gene_synonym", + "NP_414603.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08203" + ], + [ + "gene_synonym", + "araD" + ], + [ + "gene_synonym", + "b0061" + ] + ], + "dna_sequence": "ATGTTAGAAGATCTCAAACGCCAGGTATTAGAAGCCAACCTGGCGCTGCCAAAACACAACCTGGTCACGCTCACATGGGGCAACGTCAGCGCCGTTGATCGCGAGCGCGGCGTCTTTGTGATCAAACCTTCCGGCGTCGATTACAGCGTCATGACCGCTGACGATATGGTCGTGGTTAGCATCGAAACCGGTGAAGTGGTTGAAGGTACGAAAAAGCCCTCCTCCGACACGCCAACTCACCGGCTGCTCTATCAGGCATTCCCCTCCATTGGCGGCATTGTGCATACGCACTCGCGCCACGCCACCATCTGGGCGCAGGCGGGTCAGTCGATTCCAGCAACCGGCACCACCCACGCCGACTATTTCTACGGCACCATTCCCTGCACCCGCAAAATGACCGACGCAGAAATCAACGGCGAATATGAGTGGGAAACCGGTAACGTCATCGTAGAAACCTTTGAAAAACAGGGTATCGATGCAGCGCAAATGCCCGGCGTTCTGGTCCATTCCCACGGCCCGTTTGCATGGGGCAAAAATGCCGAAGATGCGGTGCATAACGCCATCGTGCTGGAAGAGGTCGCTTATATGGGGATATTCTGCCGTCAGTTAGCGCCGCAGTTACCGGATATGCAGCAAACGCTGCTGGATAAACACTATCTGCGTAAGCATGGCGCGAAGGCATATTACGGGCAGTAA", + "dna_sequence_length": 696, + "functions": [ + "L-ribulose-5-phosphate 4-epimerase" + ], + "id": "CDS_59", + "location": [ + [ + "NC_000913", + 66550, + "-", + 696 + ] + ], + "md5": "b952e0abbf58e03aaa3b308e34530868", + "parent_gene": "", + "protein_md5": "aa2874f655af5247e303666bed22cea2", + "protein_translation": "MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLDKHYLRKHGAKAYYGQ", + "protein_translation_length": 231, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000221" + ], + [ + "gene_synonym", + "ECK0063" + ], + [ + "gene_synonym", + "EcoGene:EG10052" + ], + [ + "gene_synonym", + "GI:16128056" + ], + [ + "gene_synonym", + "GeneID:947511" + ], + [ + "gene_synonym", + "JW0061" + ], + [ + "gene_synonym", + "NP_414604.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08202" + ], + [ + "gene_synonym", + "araA" + ], + [ + "gene_synonym", + "b0062" + ] + ], + "dna_sequence": "ATGACGATTTTTGATAATTATGAAGTGTGGTTTGTCATTGGCAGCCAGCATCTGTATGGCCCGGAAACCCTGCGTCAGGTCACCCAACATGCCGAGCACGTCGTTAATGCGCTGAATACGGAAGCGAAACTGCCCTGCAAACTGGTGTTGAAACCGCTGGGCACCACGCCGGATGAAATCACCGCTATTTGCCGCGACGCGAATTACGACGATCGTTGCGCTGGTCTGGTGGTGTGGCTGCACACCTTCTCCCCGGCCAAAATGTGGATCAACGGCCTGACCATGCTCAACAAACCGTTGCTGCAATTCCACACCCAGTTCAACGCGGCGCTGCCGTGGGACAGTATCGATATGGACTTTATGAACCTGAACCAGACTGCACATGGCGGTCGCGAGTTCGGCTTCATTGGCGCGCGTATGCGTCAGCAACATGCCGTGGTTACCGGTCACTGGCAGGATAAACAAGCCCATGAGCGTATCGGCTCCTGGATGCGTCAGGCGGTCTCTAAACAGGATACCCGTCATCTGAAAGTCTGCCGATTTGGCGATAACATGCGTGAAGTGGCGGTCACCGATGGCGATAAAGTTGCCGCACAGATCAAGTTCGGTTTCTCCGTCAATACCTGGGCGGTTGGCGATCTGGTGCAGGTGGTGAACTCCATCAGCGACGGCGATGTTAACGCGCTGGTCGATGAGTACGAAAGCTGCTACACCATGACGCCTGCCACACAAATCCACGGCAAAAAACGACAGAACGTGCTGGAAGCGGCGCGTATTGAGCTGGGGATGAAGCGTTTCCTGGAACAAGGTGGCTTCCACGCGTTCACCACCACCTTTGAAGATTTGCACGGTCTGAAACAGCTTCCTGGTCTGGCCGTACAGCGTCTGATGCAGCAGGGTTACGGCTTTGCGGGCGAAGGCGACTGGAAAACTGCCGCCCTGCTTCGCATCATGAAGGTGATGTCAACCGGTCTGCAGGGCGGCACCTCCTTTATGGAGGACTACACCTATCACTTCGAGAAAGGTAATGACCTGGTGCTCGGCTCCCATATGCTGGAAGTCTGCCCGTCGATCGCCGCAGAAGAGAAACCGATCCTCGACGTTCAGCATCTCGGTATTGGTGGTAAGGACGATCCTGCCCGCCTGATCTTCAATACCCAAACCGGCCCAGCGATTGTCGCCAGCTTGATTGATCTCGGCGATCGTTACCGTCTACTGGTTAACTGCATCGACACGGTGAAAACACCGCACTCCCTGCCGAAACTGCCGGTGGCGAATGCGCTGTGGAAAGCGCAACCGGATCTGCCAACTGCTTCCGAAGCGTGGATCCTCGCTGGTGGCGCGCACCATACCGTCTTCAGCCATGCACTGAACCTCAACGATATGCGCCAATTCGCCGAGATGCACGACATTGAAATCACGGTGATTGATAACGACACACGCCTGCCAGCGTTTAAAGACGCGCTGCGCTGGAACGAAGTGTATTACGGGTTTCGTCGCTAA", + "dna_sequence_length": 1503, + "functions": [ + "L-arabinose isomerase" + ], + "id": "CDS_60", + "location": [ + [ + "NC_000913", + 68337, + "-", + 1503 + ] + ], + "md5": "6d69b48b82c9b2ebfc7f9de97959597d", + "parent_gene": "", + "protein_md5": "d10df6959beed111ac1348858e76d3ae", + "protein_translation": "MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMTPATQIHGKKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAAEEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR", + "protein_translation_length": 500, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000223" + ], + [ + "gene_synonym", + "ECK0064" + ], + [ + "gene_synonym", + "EcoGene:EG10053" + ], + [ + "gene_synonym", + "GI:16128057" + ], + [ + "gene_synonym", + "GeneID:946017" + ], + [ + "gene_synonym", + "JW0062" + ], + [ + "gene_synonym", + "NP_414605.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08204" + ], + [ + "gene_synonym", + "araB" + ], + [ + "gene_synonym", + "b0063" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW0079" + ], + [ + "gene_synonym", + "NP_414623.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22186" + ], + [ + "gene_synonym", + "b0081" + ], + [ + "gene_synonym", + "mraZ" + ], + [ + "gene_synonym", + "yabB" + ] + ], + "dna_sequence": "ATGTTCCGGGGAGCAACGTTAGTCAATCTCGACAGCAAAGGGCGCTTATCAGTGCCTACCCGTTATCGGGAACAGCTGCTTGAGAACGCTGCCGGTCAAATGGTTTGCACCATTGACATTTATCACCCGTGCCTGCTGCTTTACCCCCTGCCTGAATGGGAAATTATCGAGCAAAAATTATCGCGTCTGTCGAGCATGAACCCGGTTGAGCGCCGTGTGCAGCGCCTACTGTTAGGTCATGCCAGCGAATGTCAGATGGATGGCGCAGGTCGATTGTTAATCGCGCCAGTACTGCGGCAACATGCCGGGCTGACAAAAGAAGTGATGCTGGTTGGACAGTTCAACAAGTTTGAGCTGTGGGATGAAACAACCTGGCATCAACAGGTCAAGGAAGATATCGACGCAGAGCAGTTGGCTACCGGAGACTTATCGGAGCGACTGCAGGACTTGTCTCTATAA", + "dna_sequence_length": 459, + "functions": [ + "RsmH methytransferase inhibitor" + ], + "id": "CDS_79", + "location": [ + [ + "NC_000913", + 89634, + "+", + 459 + ] + ], + "md5": "780344597af620c048cfdf9431b9c296", + "parent_gene": "", + "protein_md5": 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"MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFICIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIATEKLQMQHVDPSQENIVVQK", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000309" + ], + [ + "gene_synonym", + "ECK0085" + ], + [ + "gene_synonym", + "EcoGene:EG10341" + ], + [ + "gene_synonym", + "GI:16128077" + ], + [ + "gene_synonym", + "GeneID:944799" + ], + [ + "gene_synonym", + "JW0082" + ], + [ + "gene_synonym", + "NP_414626.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD68" + ], + [ + "gene_synonym", + "b0084" + ], + [ + "gene_synonym", + "ftsI" + ], + [ + "gene_synonym", + "pbpB" + ], + [ + "gene_synonym", + "sep" + ] + ], + "dna_sequence": 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"protein_translation_length": 588, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000311" + ], + [ + "gene_synonym", + "ECK0086" + ], + [ + "gene_synonym", + "EcoGene:EG10621" + ], + [ + "gene_synonym", + "GI:16128078" + ], + [ + "gene_synonym", + "GeneID:944791" + ], + [ + "gene_synonym", + "JW0083" + ], + [ + "gene_synonym", + "NP_414627.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22188" + ], + [ + "gene_synonym", + "b0085" + ], + [ + "gene_synonym", + "murE" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK0087" + ], + [ + "gene_synonym", + "EcoGene:EG10622" + ], + [ + "gene_synonym", + "GI:16128079" + ], + [ + "gene_synonym", + "GeneID:944813" + ], + [ + "gene_synonym", + "JW0084" + ], + [ + "gene_synonym", + "NP_414628.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11880" + ], + [ + "gene_synonym", + "b0086" + ], + [ + "gene_synonym", + "mra" + ], + [ + "gene_synonym", + "murF" + ] + ], + "dna_sequence": 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"EcoGene:EG10604" + ], + [ + "gene_synonym", + "GI:16128080" + ], + [ + "gene_synonym", + "GeneID:944814" + ], + [ + "gene_synonym", + "JW0085" + ], + [ + "gene_synonym", + "NP_414629.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6W3" + ], + [ + "gene_synonym", + "b0087" + ], + [ + "gene_synonym", + "mraY" + ], + [ + "gene_synonym", + "murX" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "JW0086" + ], + [ + "gene_synonym", + "NP_414630.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14900" + ], + [ + "gene_synonym", + "b0088" + ], + [ + "gene_synonym", + "murD" + ] + ], + "dna_sequence": "ATGGCTGATTATCAGGGTAAAAATGTCGTCATTATCGGCCTGGGCCTCACCGGGCTTTCCTGCGTGGACTTTTTCCTCGCTCGCGGTGTGACGCCGCGCGTTATGGATACGCGTATGACACCGCCTGGCCTGGATAAATTACCCGAAGCCGTAGAACGCCACACGGGCAGTCTGAATGATGAATGGCTGATGGCGGCAGATCTGATTGTCGCCAGTCCCGGTATTGCACTGGCGCATCCATCCTTAAGCGCTGCCGCTGATGCCGGAATCGAAATCGTTGGCGATATCGAGCTGTTCTGTCGCGAAGCACAAGCACCGATTGTGGCGATTACCGGTTCTAACGGCAAAAGCACGGTCACCACGCTAGTGGGTGAAATGGCGAAAGCGGCGGGGGTTAACGTTGGTGTGGGTGGCAATATTGGCCTGCCTGCGTTGATGCTACTGGATGATGAGTGTGAACTGTACGTGCTGGAACTGTCGAGCTTCCAGCTGGAAACCACCTCCAGCTTACAGGCGGTAGCAGCGACCATTCTGAACGTGACTGAAGATCATATGGATCGCTATCCGTTTGGTTTACAACAGTATCGTGCAGCAAAACTGCGCATTTACGAAAACGCGAAAGTTTGCGTGGTTAATGCTGATGATGCCTTAACAATGCCGATTCGCGGTGCGGATGAACGCTGCGTCAGCTTTGGCGTCAACATGGGTGACTATCACCTGAATCATCAGCAGGGCGAAACCTGGCTGCGGGTTAAAGGCGAGAAAGTGCTGAATGTGAAAGAGATGAAACTTTCCGGGCAGCATAACTACACCAATGCGCTGGCGGCGCTGGCGCTGGCAGATGCTGCAGGGTTACCGCGTGCCAGCAGCCTGAAAGCGTTAACCACATTCACTGGTCTGCCGCATCGCTTTGAAGTTGTGCTGGAGCATAACGGCGTACGTTGGATTAACGATTCGAAAGCGACCAACGTCGGCAGTACGGAAGCGGCGCTGAATGGCCTGCACGTAGACGGCACACTGCATTTGTTGCTGGGTGGCGATGGTAAATCGGCGGACTTTAGCCCACTGGCGCGTTACCTGAATGGCGATAACGTACGTCTGTATTGTTTCGGTCGTGACGGCGCGCAGCTGGCGGCGCTACGCCCGGAAGTGGCAGAACAAACCGAAACTATGGAACAGGCGATGCGCTTGCTGGCTCCGCGTGTTCAGCCGGGCGATATGGTTCTGCTCTCCCCAGCCTGTGCCAGCCTTGATCAGTTCAAGAACTTTGAACAACGAGGCAATGAGTTTGCCCGTCTGGCGAAGGAGTTAGGTTGA", 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"gene_synonym", + "GI:16128082" + ], + [ + "gene_synonym", + "GeneID:946322" + ], + [ + "gene_synonym", + "JW0087" + ], + [ + "gene_synonym", + "NP_414631.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABG4" + ], + [ + "gene_synonym", + "b0089" + ], + [ + "gene_synonym", + "ftsW" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "GI:16128083" + ], + [ + "gene_synonym", + "GeneID:946321" + ], + [ + "gene_synonym", + "JW0088" + ], + [ + "gene_synonym", + "NP_414632.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17443" + ], + [ + "gene_synonym", + "b0090" + ], + [ + "gene_synonym", + "murG" + ] + ], + "dna_sequence": 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"JW0089" + ], + [ + "gene_synonym", + "NP_414633.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17952" + ], + [ + "gene_synonym", + "b0091" + ], + [ + "gene_synonym", + "murC" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG10214" + ], + [ + "gene_synonym", + "GI:16128085" + ], + [ + "gene_synonym", + "GeneID:946324" + ], + [ + "gene_synonym", + "JW0090" + ], + [ + "gene_synonym", + "NP_414634.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07862" + ], + [ + "gene_synonym", + "b0092" + ], + [ + "gene_synonym", + "ddl" + ], + [ + "gene_synonym", + "ddlB" + ] + ], + "dna_sequence": 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ligase" + ], + "id": "CDS_90", + "location": [ + [ + "NC_000913", + 102233, + "+", + 921 + ] + ], + "md5": "ee3cc820d83220e0cbe878dc1564cc51", + "parent_gene": "", + "protein_md5": "54e611311e0e2a239edc3e7c5749607a", + "protein_translation": "MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLSDETQYFCPAGLEASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVRILELAD", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000329" + ], + [ + "gene_synonym", + "ECK0094" + ], + [ + "gene_synonym", + "EcoGene:EG10342" + ], + [ + "gene_synonym", + "GI:16128086" + ], + [ + "gene_synonym", + "GeneID:944823" + ], + [ + "gene_synonym", + "JW0091" + ], + [ + "gene_synonym", + "NP_414635.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06136" + ], + [ + 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membrane anchored protein involved in growth of wall at septum" + ], + "id": "CDS_91", + "location": [ + [ + "NC_000913", + 103155, + "+", + 831 + ] + ], + "md5": "15bdd6f4abdf4de8eed1980c349d5735", + "parent_gene": "", + "protein_md5": "89c302565302e97261ffc4ee483d4770", + "protein_translation": "MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWVVLGWMEDAQRLPLSKLVLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQRLPWIKQVSVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPPERTSKQVLPMLYGPEGSANEVLQGYREMGQMLAKDRFTLKEAAMTARRSWQLTLNNDIKLNLGRGDTMKRLARFVELYPVLQQQAQTDGKRISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ", + "protein_translation_length": 276, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000331" + ], + [ + "gene_synonym", + "ECK0095" + ], + [ + "gene_synonym", + "EcoGene:EG10339" + ], + [ + "gene_synonym", + "GI:16128087" + ], + [ + "gene_synonym", + "GeneID:944778" + ], + [ + "gene_synonym", + "JW0092" + ], + [ + "gene_synonym", + "NP_414636.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABH0" + ], + [ + "gene_synonym", + "b0094" + ], + [ + "gene_synonym", + "divA" + ], + [ + "gene_synonym", + "ftsA" + ] + ], + "dna_sequence": 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"GI:16128088" + ], + [ + "gene_synonym", + "GeneID:944786" + ], + [ + "gene_synonym", + "JW0093" + ], + [ + "gene_synonym", + "NP_414637.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9A6" + ], + [ + "gene_synonym", + "b0095" + ], + [ + "gene_synonym", + "ftsZ" + ], + [ + "gene_synonym", + "sfiB" + ], + [ + "gene_synonym", + "sulB" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK0118" + ], + [ + "gene_synonym", + "EcoGene:EG12605" + ], + [ + "gene_synonym", + "GI:90111086" + ], + [ + "gene_synonym", + "GeneID:944809" + ], + [ + "gene_synonym", + "JW0115" + ], + [ + "gene_synonym", + "NP_414661.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8E5" + ], + [ + "gene_synonym", + "b0119" + ], + [ + "gene_synonym", + "yacL" + ] + ], + "dna_sequence": "ATGGATTACGAATTTCTGCGCGATATTACCGGAGTGGTAAAGGTGCGTATGTCCATGGGGCATGAAGTGGTCGGGCACTGGTTTAATGAAGAGGTGAAAGAAAACCTGGCCTTGCTTGATGAAGTGGAACAAGCAGCGCACGCACTGAAAGGTAGCGAACGGTCCTGGCAACGGGCAGGGCATGAATACACCCTGTGGATGGACGGTGAAGAGGTGATGGTTCGCGCCAATCAACTGGAATTCGCTGGCGATGAAATGGAAGAGGGGATGAACTACTACGACGAAGAAAGCCTGTCGCTATGCGGCGTTGAGGATTTTCTGCAGGTCGTGGCGGCTTACCGCAATTTCGTGCAGCAGAAGTAA", + "dna_sequence_length": 363, + "functions": [ + "UPF0231 family protein" + ], + "id": "CDS_115", + "location": [ + [ + "NC_000913", + 134388, + "+", + 363 + ] + ], + "md5": "ce0985d1b27ebed07a604a60727d2b4c", + "parent_gene": "", 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"gene_synonym", + "gspS" + ], + [ + "gene_synonym", + "yacC" + ] + ], + "dna_sequence": "ATGAAGACGTTTTTCAGAACAGTGTTATTCGGCAGCCTGATGGCCGTCTGCGCAAACAGTTACGCGCTCAGCGAGTCTGAAGCCGAAGATATGGCCGATTTAACGGCAGTTTTTGTCTTTCTGAAGAACGATTGTGGTTACCAGAACTTACCTAACGGGCAAATTCGTCGCGCACTGGTCTTTTTCGCTCAGCAAAACCAGTGGGACCTCAGTAATTACGACACCTTCGACATGAAAGCCCTCGGTGAAGACAGCTACCGCGATCTCAGCGGCATTGGCATTCCCGTCGCTAAAAAATGCAAAGCCCTGGCCCGCGATTCCTTAAGCCTGCTTGCCTACGTCAAATAA", + "dna_sequence_length": 348, + "functions": [ + "PulS_OutS family protein" + ], + "id": "CDS_118", + "location": [ + [ + "NC_000913", + 136917, + "-", + 348 + ] + ], + "md5": "4d4db90766d48691b2f918ad9727c123", + "parent_gene": "", + "protein_md5": "e1f11b794d647462366a094eeaf6a8b8", + "protein_translation": "MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK", + "protein_translation_length": 115, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000430" + ], + [ + "gene_synonym", + "ECK0122" + ], + [ + "gene_synonym", + "EcoGene:EG12318" + ], + [ + "gene_synonym", + "GI:16128116" + ], + [ + "gene_synonym", + "GeneID:947736" + ], + [ + "gene_synonym", + "JW0119" + ], + [ + "gene_synonym", + "NP_414665.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36649" + ], + [ + "gene_synonym", + "b0123" + ], + [ + "gene_synonym", + "cueO" + ], + [ + "gene_synonym", + "cuiD" + ], + [ + "gene_synonym", + "yacK" + ] + ], + "dna_sequence": 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"ECK0149" + ], + [ + "gene_synonym", + "EcoGene:EG10302" + ], + [ + "gene_synonym", + "GI:16128143" + ], + [ + "gene_synonym", + "GeneID:944856" + ], + [ + "gene_synonym", + "JW0146" + ], + [ + "gene_synonym", + "NP_414692.1" + ], + [ + "gene_synonym", + "T1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06971" + ], + [ + "gene_synonym", + "b0150" + ], + [ + "gene_synonym", + "fhuA" + ], + [ + "gene_synonym", + "tonA" + ] + ], + "dna_sequence": 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"GeneID:944875" + ], + [ + "gene_synonym", + "JW0182" + ], + [ + "gene_synonym", + "NP_414729.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52096" + ], + [ + "gene_synonym", + "b0187" + ], + [ + "gene_synonym", + "yaeR" + ] + ], + "dna_sequence": "ATGCTGGGTTTAAAACAGGTTCACCATATTGCGATTATTGCGACGGATTATGCGGTGAGCAAAGCTTTCTACTGCGATATTCTTGGTTTCACGCTGCAAAGCGAAGTCTATCGCGAAGCGCGCGACTCATGGAAAGGGGATTTGGCGCTTAATGGGCAATATGTGATTGAGCTTTTCTCATTTCCGTTCCCGCCGGAACGACCCAGCCGACCGGAAGCTTGCGGTCTGCGTCATCTGGCTTTTAGCGTTGATGACATCGATGCGGCAGTGGCGCACCTTGAAAGCCATAACGTGAAGTGTGAAACCATCCGTGTCGATCCATACACGCAAAAACGCTTCACCTTCTTTAACGATCCGGACGGGCTGCCGTTGGAACTGTATGAGCAGTAA", + "dna_sequence_length": 390, + "functions": [ + "putative lyase" + ], + "id": "CDS_182", + "location": [ + [ + "NC_000913", + 211877, + "+", + 390 + ] + ], + "md5": "0dfca0b72589d7917f4e6bd71c1bd194", + "parent_gene": "", + "protein_md5": "4b1e42e2cf1af9aa6558949461a02c9d", + "protein_translation": "MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDIDAAVAHLESHNVKCETIRVDPYTQKRFTFFNDPDGLPLELYEQ", + "protein_translation_length": 129, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0000638" + ], + [ + "gene_synonym", + "ECK0187" + ], + [ + "gene_synonym", + "EcoGene:EG13220" + ], + [ + "gene_synonym", + "GI:16128181" + ], + [ + "gene_synonym", + "GeneID:944889" + ], + [ + "gene_synonym", + "JW0183" + ], + [ + "gene_synonym", + "NP_414730.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52097" + ], + [ + "gene_synonym", + "b0188" + ], + [ + "gene_synonym", + "mesJ" + ], + [ + "gene_synonym", + "tilS" + ], + [ + "gene_synonym", + "yaeN" + ] + ], + "dna_sequence": 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"GeneID:944914" + ], + [ + "gene_synonym", + "JW0216" + ], + [ + "gene_synonym", + "NP_414761.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47150" + ], + [ + "gene_synonym", + "b0226" + ], + [ + "gene_synonym", + "dinJ" + ], + [ + "gene_synonym", + "sosA" + ] + ], + "dna_sequence": "ATGGCTGCTAACGCGTTTGTTCGCGCCCGAATCGATGAAGATCTGAAGAATCAGGCAGCGGACGTACTGGCCGGGATGGGGCTGACCATCTCTGACCTGGTTCGCATAACCCTCACAAAGGTCGCGCGTGAAAAGGCATTGCCGTTTGATTTACGCGAGCCTAATCAATTAACCATTCAATCAATCAAAAACAGCGAAGCTGGCATTGATGTTCATAAGGCCAAAGACGCCGATGATTTATTTGATAAATTAGGAATTTAA", + "dna_sequence_length": 261, + "functions": [ + "antitoxin of YafQ-DinJ toxin-antitoxin system" + ], + "id": "CDS_217", + "location": [ + [ + "NC_000913", + 246502, + "-", + 261 + ] + ], + "md5": "4c9bd396db89f3f1a6060c8f913ee4be", + "parent_gene": "", + "protein_md5": "8ed30fa024c83ac35ce6b448a8331891", + "protein_translation": "MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVAREKALPFDLREPNQLTIQSIKNSEAGIDVHKAKDADDLFDKLGI", + 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"gene_synonym", + "EcoGene:EG11092" + ], + [ + "gene_synonym", + "GeneID:945077" + ], + [ + "gene_synonym", + "JW0230" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24251" + ], + [ + "gene_synonym", + "b0240" + ], + [ + "gene_synonym", + "crl" + ] + ], + "dna_sequence": "ATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGTCTGTTCGATAAAGCAGGCGACTGGAAGAGTGTTCCGGTAAAAGACACTGAAGTGGTTGAACGACTGGAGCACACCCTGCGTGAGTTTCACGAGAAGCTGCGTGAACTGCTGACGACGCTGAATCTGAAGCTGGAACCGGCGGATGATTTTCGTGACGAGCCGGTGAAGTTAACGGCGTGA", + "dna_sequence_length": 402, + "id": "CDS_231", + "location": [ + [ + "NC_000913", + 257829, + "+", + 71 + ], + [ + "NC_000913", + 258676, + "+", + 331 + ] + ], + "md5": "f6cc46cda3db482cf261efa371a888ca", + "parent_gene": "", + "protein_md5": "214b4b54f12329f8906ac58e750461cd", + "protein_translation": 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"gene_synonym", + "JW0232" + ], + [ + "gene_synonym", + "NP_414777.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7B5" + ], + [ + "gene_synonym", + "b0242" + ], + [ + "gene_synonym", + "pro" + ], + [ + "gene_synonym", + "proB" + ] + ], + "dna_sequence": 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"functions": [ + "uncharacterized protein" + ], + "id": "CDS_292", + "location": [ + [ + "NC_000913", + 312112, + "+", + 228 + ] + ], + "md5": "96af576be5b5e04bf2ffb7e48e4ef560", + "parent_gene": "", + "protein_md5": "043dcc3b0fa38e1433ad27639e6f71d5", + "protein_translation": "MQAAPQREETEWRVQSKRGLMPAYRGEAGQQVNIKIMEYSERNVRQLASNEQEEYIPRKINVGVINTPTLIRSDY", + "protein_translation_length": 75, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285027" + ], + [ + "gene_synonym", + "ECK0295" + ], + [ + "gene_synonym", + "EcoGene:EG14432" + ], + [ + "gene_synonym", + "GI:94541137" + ], + [ + "gene_synonym", + "GeneID:1450238" + ], + [ + "gene_synonym", + "JW5034" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q2EEQ2" + ], + [ + "gene_synonym", + "YP_588437.1" + ], + [ + "gene_synonym", + "b4506" + ], + [ + "gene_synonym", + "rpmJ2" + ], + [ + "gene_synonym", + "ykgO" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW0307" + ], + [ + "gene_synonym", + "NP_414849.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21514" + ], + [ + "gene_synonym", + "b0315" + ], + [ + "gene_synonym", + "yahA" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW0308" + ], + [ + "gene_synonym", + "NP_414850.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77700" + ], + [ + "gene_synonym", + "b0316" + ], + [ + "gene_synonym", + "yahB" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P77219" + ], + [ + "gene_synonym", + "b0317" + ], + [ + "gene_synonym", + "yahC" + ] + ], + "dna_sequence": "ATGAACGGACTCACGGCAACGGGTGTCACCGTCGGTATTTGTGCAGGGCTTTGGCAGTTAGTGTCTTCACATGTCGGGCTCTCTCAAGGATGGGAATTATTAGGAACCATTGGCTTCGTCGCCTTTTGCAGTTTTTATGCCGCAGGCGGCGGTAAATCGGGGTTTATCAGAAGTCTGGCGGTTAATTATTCCGGGATGGTGTGGGCGTTTTTCGCCGCGCTGACTGCTGGTTGGCTGGCCTCTGTAAGTGGACTGTCCGCGTTCTGGGCGAGCGTAATTACTACCGTACCCTTCTCGGCGGTAGTGGTCTGGCAAGGGCGTTTCTGGTTACTGTCCTTTATTCCCGGTGGCTTTCTCGGCATGACGCTGTTTTTTGCCAGCGGGATGAACTGGACGGTGACGTTACTGGGTTTTCTGGCGGGTAACTGCGTGGGGGTAATTTCAGAATATGGTGGACAAAAATTAAGCGAAGCGACGACTAAACGCGACGGGTATTAA", + "dna_sequence_length": 498, + "functions": [ + "putative inner membrane protein" + ], + "id": "CDS_316", + "location": [ + [ + "NC_000913", + 335022, + "-", + 498 + ] + ], + "md5": "89f6469dc519e91a5050a281c000a745", + "parent_gene": "", + "protein_md5": "0235befc034c930aa28b7f4ceca7b4c8", + "protein_translation": 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[ + "gene_synonym", + "GI:16128308" + ], + [ + "gene_synonym", + "GeneID:944984" + ], + [ + "gene_synonym", + "JW0315" + ], + [ + "gene_synonym", + "NP_414857.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77624" + ], + [ + "gene_synonym", + "b0323" + ], + [ + "gene_synonym", + "yahI" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P77554" + ], + [ + "gene_synonym", + "b0324" + ], + [ + "gene_synonym", + "yahJ" + ] + ], + "dna_sequence": 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"EcoGene:EG13595" + ], + [ + "gene_synonym", + "GI:16128310" + ], + [ + "gene_synonym", + "GeneID:944975" + ], + [ + "gene_synonym", + "JW0317" + ], + [ + "gene_synonym", + "NP_414859.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75691" + ], + [ + "gene_synonym", + "b0325" + ], + [ + "gene_synonym", + "yahK" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_414862.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75693" + ], + [ + "gene_synonym", + "b0328" + ], + [ + "gene_synonym", + "yahN" + ] + ], + "dna_sequence": "ATGATGCAGTTAGTTCACTTATTTATGGATGAAATCACTATGGATCCTTTGCATGCCGTTTACCTGACCGTAGGACTGTTCGTGATTACTTTTTTTAATCCGGGAGCCAATCTCTTTGTGGTAGTACAAACCAGCCTGGCTTCCGGTCGACGCGCAGGGGTGCTGACCGGGCTGGGCGTGGCGCTGGGCGATGCATTTTATTCCGGGTTGGGTTTGTTTGGTCTTGCAACGCTAATTACGCAGTGTGAGGAGATTTTTTCGCTTATCAGAATCGTCGGCGGCGCTTATCTCTTATGGTTTGCGTGGTGCAGCATGCGCCGCCAGTCAACACCGCAAATGAGCACACTACAACAACCGATTAGCGCCCCCTGGTATGTCTTTTTTCGCCGCGGATTAATTACCGATCTCTCTAACCCGCAAACCGTTTTATTTTTTATCAGTATTTTCTCAGTAACATTAAATGCCGAAACACCAACATGGGCACGTTTAATGGCCTGGGCGGGGATTGTGCTCGCATCAATTATCTGGCGAGTTTTTCTTAGTCAGGCGTTTTCTTTGCCCGCTGTGCGTCGTGCTTATGGGCGTATGCAACGCGTTGCCAGTCGGGTTATTGGTGCAATTATTGGTGTATTCGCGCTACGCCTGATTTACGAAGGGGTGACGCAGCGGTGA", + "dna_sequence_length": 672, + "functions": [ + "amino acid exporter for proline, lysine, glutamate, homoserine" + ], + "id": 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"GeneID:944987" + ], + [ + "gene_synonym", + "JW0322" + ], + [ + "gene_synonym", + "NP_414864.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77743" + ], + [ + "gene_synonym", + "b0330" + ], + [ + "gene_synonym", + "prpR" + ], + [ + "gene_synonym", + "yahP" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK0329" + ], + [ + "gene_synonym", + "EcoGene:EG13601" + ], + [ + "gene_synonym", + "GI:16128316" + ], + [ + "gene_synonym", + "GeneID:944990" + ], + [ + "gene_synonym", + "JW0323" + ], + [ + "gene_synonym", + "NP_414865.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77541" + ], + [ + "gene_synonym", + "b0331" + ], + [ + "gene_synonym", + "prpB" + ], + [ + "gene_synonym", + "yahQ" + ] + ], + "dna_sequence": 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"location": [ + [ + "NC_000913", + 348682, + "+", + 891 + ] + ], + "md5": "bb2ef7de19e8cf09ed2469b510d84c40", + "parent_gene": "", + "protein_md5": "1c117956dd932bba0dc42cc8709188d8", + "protein_translation": "MSLHSPGKAFRAALTKENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRCGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFRAMNRAAEHVYNVLRQEGTQKSVIDTMQTRNELYESINYYQYEEKLDNLFARSQVK", + "protein_translation_length": 296, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001148" + ], + [ + "gene_synonym", + "ECK0330" + ], + [ + "gene_synonym", + "EcoGene:EG11756" + ], + [ + "gene_synonym", + "GI:16128318" + ], + [ + "gene_synonym", + "GeneID:947528" + ], + [ + "gene_synonym", + "JW0324" + ], + [ + "gene_synonym", + "NP_414867.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31660" + ], + [ + "gene_synonym", + "b0333" + ], + [ + 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}, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001175" + ], + [ + "gene_synonym", + "ECK0338" + ], + [ + "gene_synonym", + "EcoGene:EG10177" + ], + [ + "gene_synonym", + "GI:16128326" + ], + [ + "gene_synonym", + "GeneID:946770" + ], + [ + "gene_synonym", + "JW0332" + ], + [ + "gene_synonym", + "NP_414875.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17583" + ], + [ + "gene_synonym", + "b0341" + ], + [ + "gene_synonym", + "cynX" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "JW0333" + ], + [ + "gene_synonym", + "NP_414876.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07464" + ], + [ + "gene_synonym", + "b0342" + ], + [ + "gene_synonym", + "lacA" + ] + ], + "dna_sequence": "TTGAACATGCCAATGACCGAAAGAATAAGAGCAGGCAAGCTATTTACCGATATGTGCGAAGGCTTACCGGAAAAAAGACTTCGTGGGAAAACGTTAATGTATGAGTTTAATCACTCGCATCCATCAGAAGTTGAAAAAAGAGAAAGCCTGATTAAAGAAATGTTTGCCACGGTAGGGGAAAACGCCTGGGTAGAACCGCCTGTCTATTTCTCTTACGGTTCCAACATCCATATAGGCCGCAATTTTTATGCAAATTTCAATTTAACCATTGTCGATGACTACACGGTAACAATCGGTGATAACGTACTGATTGCACCCAACGTTACTCTTTCCGTTACGGGACACCCTGTACACCATGAATTGAGAAAAAACGGCGAGATGTACTCTTTTCCGATAACGATTGGCAATAACGTCTGGATCGGAAGTCATGTGGTTATTAATCCAGGCGTCACCATCGGGGATAATTCTGTTATTGGCGCGGGTAGTATCGTCACAAAAGACATTCCACCAAACGTCGTGGCGGCTGGCGTTCCTTGTCGGGTTATTCGCGAAATAAACGACCGGGATAAGCACTATTATTTCAAAGATTATAAAGTTGAATCGTCAGTTTAA", + "dna_sequence_length": 612, + "functions": [ + "thiogalactoside acetyltransferase" + ], + "id": "CDS_339", + "location": [ + [ + "NC_000913", + 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"ATGTACTATTTAAAAAACACAAACTTTTGGATGTTCGGTTTATTCTTTTTCTTTTACTTTTTTATCATGGGAGCCTACTTCCCGTTTTTCCCGATTTGGCTACATGACATCAACCATATCAGCAAAAGTGATACGGGTATTATTTTTGCCGCTATTTCTCTGTTCTCGCTATTATTCCAACCGCTGTTTGGTCTGCTTTCTGACAAACTCGGGCTGCGCAAATACCTGCTGTGGATTATTACCGGCATGTTAGTGATGTTTGCGCCGTTCTTTATTTTTATCTTCGGGCCACTGTTACAATACAACATTTTAGTAGGATCGATTGTTGGTGGTATTTATCTAGGCTTTTGTTTTAACGCCGGTGCGCCAGCAGTAGAGGCATTTATTGAGAAAGTCAGCCGTCGCAGTAATTTCGAATTTGGTCGCGCGCGGATGTTTGGCTGTGTTGGCTGGGCGCTGTGTGCCTCGATTGTCGGCATCATGTTCACCATCAATAATCAGTTTGTTTTCTGGCTGGGCTCTGGCTGTGCACTCATCCTCGCCGTTTTACTCTTTTTCGCCAAAACGGATGCGCCCTCTTCTGCCACGGTTGCCAATGCGGTAGGTGCCAACCATTCGGCATTTAGCCTTAAGCTGGCACTGGAACTGTTCAGACAGCCAAAACTGTGGTTTTTGTCACTGTATGTTATTGGCGTTTCCTGCACCTACGATGTTTTTGACCAACAGTTTGCTAATTTCTTTACTTCGTTCTTTGCTACCGGTGAACAGGGTACGCGGGTATTTGGCTACGTAACGACAATGGGCGAATTACTTAACGCCTCGATTATGTTCTTTGCGCCACTGATCATTAATCGCATCGGTGGGAAAAACGCCCTGCTGCTGGCTGGCACTATTATGTCTGTACGTATTATTGGCTCATCGTTCGCCACCTCAGCGCTGGAAGTGGTTATTCTGAAAACGCTGCATATGTTTGAAGTACCGTTCCTGCTGGTGGGCTGCTTTAAATATATTACCAGCCAGTTTGAAGTGCGTTTTTCAGCGACGATTTATCTGGTCTGTTTCTGCTTCTTTAAGCAACTGGCGATGATTTTTATGTCTGTACTGGCGGGCAATATGTATGAAAGCATCGGTTTCCAGGGCGCTTATCTGGTGCTGGGTCTGGTGGCGCTGGGCTTCACCTTAATTTCCGTGTTCACGCTTAGCGGCCCCGGCCCGCTTTCCCTGCTGCGTCGTCAGGTGAATGAAGTCGCTTAA", 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"gene_synonym", + "GeneID:945006" + ], + [ + "gene_synonym", + "JW0335" + ], + [ + "gene_synonym", + "NP_414878.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00722" + ], + [ + "gene_synonym", + "b0344" + ], + [ + "gene_synonym", + "lacZ" + ] + ], + "dna_sequence": 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"MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFAWFPAPEAVPESWLECDLPEADTVVVPSNWQMHGYDAPIYTNVTYPITVNPPFVPTENPTGCYSLTFNVDESWLQEGQTRIIFDGVNSAFHLWCNGRWVGYGQDSRLPSEFDLSAFLRAGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLLHKPTTQISDFHVATRFNDDFSRAVLEAEVQMCGELRDYLRVTVSLWQGETQVASGTAPFGGEIIDERGGYADRVTLRLNVENPKLWSAEIPNLYRAVVELHTADGTLIEAEACDVGFREVRIENGLLLLNGKPLLIRGVNRHEHHPLHGQVMDEQTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLYVVDEANIETHGMVPMNRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHGANHDALYRWIKSVDPSRPVQYEGGGADTTATDIICPMYARVDEDQPFPAVPKWSIKKWLSLPGETRPLILCEYAHAMGNSLGGFAKYWQAFRQYPRLQGGFVWDWVDQSLIKYDENGNPWSAYGGDFGDTPNDRQFCMNGLVFADRTPHPALTEAKHQQQFFQFRLSGQTIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVPLDVAPQGKQLIELPELPQPESAGQLWLTVRVVQPNATAWSEAGHISAWQQWRLAENLSVTLPAASHAIPHLTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLTPLRDQFTRAPLDNDIGVSEATRIDPNAWVERWKAAGHYQAEAALLQCTADTLADAVLITTAHAWQHQGKTLFISRKTYRIDGSGQMAITVDVEVASDTPHPARIGLNCQLAQVAERVNWLGLGPQENYPDRLTAACFDRWDLPLSDMYTPYVFPSENGLRCGTRELNYGPHQWRGDFQFNISRYSQQQLMETSHRHLLHAEEGTWLNIDGFHMGIGGDDSWSPSVSAEFQLSAGRYHYQLVWCQK", 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"2,3-dihydroxyphenylpropionate 1,2-dioxygenase" + ], + "id": "CDS_345", + "location": [ + [ + "NC_000913", + 370277, + "+", + 945 + ] + ], + "md5": "f4870f2d857cf429362d1d8c4fe37bca", + "parent_gene": "", + "protein_md5": "2932d3b4e9fdac8bc4bfe81ba6c920bd", + "protein_translation": "MHAYLHCLSHSPLVGYVDPAQEVLDEVNGVIASARERIAAFSPELVVLFAPDHYNGFFYDVMPPFCLGVGATAIGDFGSAAGELPVPVELAEACAHAVMKSGIDLAVSYCMQVDHGFAQPLEFLLGGLDKVPVLPVFINGVATPLPGFQRTRMLGEAIGRFTSTLNKRVLFLGSGGLSHQPPVPELAKADAHMRDRLLGSGKDLPASERELRQQRVISAAEKFVEDQRTLHPLNPIWDNQFMTLLEQGRIQELDAVSNEELSAIAGKSTHEIKTWVAAFAAISAFGNWRSEGRYYRPIPEWIAGFGSLSARTEN", + "protein_translation_length": 314, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001201" + ], + [ + "gene_synonym", + "ECK0346" + ], + [ + "gene_synonym", + "EcoGene:EG20275" + ], + [ + "gene_synonym", + "GI:459201369" + ], + [ + "gene_synonym", + "GeneID:944954" + ], + [ + "gene_synonym", + "JW0340" + ], + [ + "gene_synonym", + "NP_414883.5" + ], + [ + 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"mhpD" + ], + [ + "gene_synonym", + "mhpS" + ] + ], + "dna_sequence": "ATGACGAAGCATACTCTTGAGCAACTGGCGGCGGATTTACGCCGCGCCGCAGAGCAGGGCGAAGCGATTGCACCGCTGCGCGATCTGATTGGTATCGATAACGCTGAAGCGGCTTACGCCATTCAGCACATAAATGTGCAACATGACGTTGCGCAGGGGCGTCGCGTGGTAGGGCGTAAAGTGGGCCTGACACATCCGAAAGTGCAACAACAACTGGGCGTTGATCAACCGGATTTTGGGACGTTATTTGCCGACATGTGTTATGGCGATAACGAAATCATTCCTTTTTCCCGTGTTCTGCAACCCCGCATTGAAGCGGAGATCGCACTGGTGTTGAACCGCGATTTGCCCGCAACCGATATCACCTTCGACGAATTGTATAACGCCATTGAATGGGTACTTCCGGCGCTGGAAGTGGTGGGGAGCCGCATTCGCGACTGGTCGATTCAGTTTGTCGATACCGTGGCAGATAACGCCTCCTGTGGGGTGTATGTCATCGGCGGTCCGGCGCAACGTCCGGCGGGGTTAGACCTGAAAAACTGCGCCATGAAGATGACGCGTAATAACGAAGAGGTTTCTAGCGGGCGCGGCAGCGAATGCCTGGGACATCCGCTTAATGCGGCCGTCTGGCTGGCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGA", + "dna_sequence_length": 810, + "functions": [ + "2-keto-4-pentenoate hydratase" + ], + "id": "CDS_347", + "location": [ + [ + "NC_000913", + 372115, + "+", + 810 + ] + ], + "md5": "4521c523ab1522dae841ce7daf0c7e0a", + "parent_gene": "", + "protein_md5": "da10eaa6e06640558dea3773f0f7dd3c", + "protein_translation": "MTKHTLEQLAADLRRAAEQGEAIAPLRDLIGIDNAEAAYAIQHINVQHDVAQGRRVVGRKVGLTHPKVQQQLGVDQPDFGTLFADMCYGDNEIIPFSRVLQPRIEAEIALVLNRDLPATDITFDELYNAIEWVLPALEVVGSRIRDWSIQFVDTVADNASCGVYVIGGPAQRPAGLDLKNCAMKMTRNNEEVSSGRGSECLGHPLNAAVWLARKMASLGEPLRTGDIILTGALGPMVAVNAGDRFEAHIEGIGSVAATFSSAAPKGSLS", + "protein_translation_length": 269, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001207" + ], + [ + "gene_synonym", + "ECK0348" + ], + [ + "gene_synonym", + "EcoGene:EG13625" + ], + [ + "gene_synonym", + "GI:16128336" + ], + [ + "gene_synonym", + "GeneID:945008" + ], + [ + "gene_synonym", + "JW0342" + ], + [ + "gene_synonym", + "NP_414885.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77580" + ], + [ + "gene_synonym", + "b0351" + ], + [ + "gene_synonym", + "mhpF" + ] + ], + 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], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P51020" + ], + [ + "gene_synonym", + "b0352" + ], + [ + "gene_synonym", + "mhpE" + ] + ], + "dna_sequence": 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"MHSWKKKLVVSQLALACTLAITSQANAANYDTWTYIDNPVTALDWDHMDKAGTVDGNYVNYSGFVYYNNTNGDFDQSFNGDTVNGTISTYYLNHDYADSTANQLDISNSVIHGSITSMLPGGYYDRFDADGNNLGGYDFYTDAVVDTHWRDGDVFTLNIANTTIDDDYEALYFTDSYKDGDVTKHTNETFDTSEGVAVNLDVESNINISNNSRVAGIALSQGNTYNETYTTESHTWDNNISVKDSTVTSGSNYILDSNTYGKTGHFGNSDEPSDYAGPGDVAMSFTASGSDYAMKNNVFLSNSTLMGDVAFTSTWNSNFDPNGHDSNGDGVKDTNGGWTDDSLNVDELNLTLDNGSKWVGQAIYNVAETSAMYDVATNSLTPDATYENNDWKRVVDDKVFQSGVFNVALNNGSEWDTTGRSIVDTLTVNNGSQVNVSESKLTSDTIDLTNGSSLNIGEDGYVDTDHLTINSYSTVALTESTGWGADYNLYANTITVTNGGVLDVNVDQFDTEAFRTDKLELTSGNIADHNGNVVSGVFDIHSSDYVLNADLVNDRTWDTSKSNYGYGIVAMNSDGHLTINGNGDVDNGTELDNSSVDNVVAATGNYKVRIDNATGAGAIADYKDKEIIYVNDVNSNATFSAANKADLGAYTYQAEQRGNTVVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYVTPYGSVSGLFQSGDDYQLSNDMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKLAYVYDDSNNDNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWSANVGVKYTW", + "protein_translation_length": 968, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001277" + ], + [ + "gene_synonym", + "ECK0299" + ], + [ + "gene_synonym", + "EcoGene:EG40006" + ], + [ + "gene_synonym", + "GI:16128357" + ], + [ + "gene_synonym", + "GeneID:945036" + ], + [ + "gene_synonym", + "NP_414906.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF80" + ], + [ + "gene_synonym", + "b0372" + ], + [ + "gene_synonym", + "insF1" + ] + ], + "dna_sequence": 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392605, + "-", + 867 + ] + ], + "md5": "f16497ced719778b623ae488d3ff6549", + "parent_gene": "", + "protein_md5": "d747daab607a7e429605aaffca2556f8", + "protein_translation": "MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQFRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKFSPVSYRAHGLPVSENLLEQDFYASGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRKRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSMSAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENKNLA", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001279" + ], + [ + "gene_synonym", + "ECK0298" + ], + [ + "gene_synonym", + "EcoGene:EG40005" + ], + [ + "gene_synonym", + "GI:226524701" + ], + [ + "gene_synonym", + "GeneID:946900" + ], + [ + "gene_synonym", + "NP_414907.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF67" + ], + [ + "gene_synonym", + "b0373" + ], + [ + "gene_synonym", + "insE1" + ] + ], + "dna_sequence": "ATGACAAAAACAGTATCAACCAGTAAAAAACCCCGTAAACAGCATTCGCCTGAATTTCGCAGTGAAGCCCTGAAGCTTGCTGAACGCATCGGTGTTACTGCCGCAGCCCGTGAACTCAGCCTGTATGAATCACAACTCTACAACTGGCGCAGTAAACAGCAAAATCAGCAGACGTCTTCTGAACGTGAACTGGAGATGTCTACCGAGATTGCACGTCTCAAACGCCAGCTGGCAGAACGGGATGAAGAGCTGGCTATCCTCCAAAAGGCCGCGACATACTTCGCGAAGCGCCTGAAATGA", + "dna_sequence_length": 300, + "functions": [ + "IS3 transposase A" + ], + "id": "CDS_368", + "location": [ + [ + "NC_000913", + 392901, + "-", + 300 + ] + ], + "md5": "2b8299a430402ee6e8586f7af8039b36", + "parent_gene": "", + "protein_md5": "03ddb941ec5f7556890ce78365da94d2", + "protein_translation": "MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYESQLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK", + "protein_translation_length": 99, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001290" + ], + [ + "gene_synonym", + "ECK0370" + ], + [ + "gene_synonym", + "EcoGene:EG13607" + ], + [ + "gene_synonym", + "GI:226524702" + ], + [ + "gene_synonym", + "GeneID:946902" + ], + [ + "gene_synonym", + "JW0366" + ], + [ + "gene_synonym", + "NP_414909.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAP5" + ], + [ + "gene_synonym", + "b0375" + ], + [ + "gene_synonym", + "yaiV" + ] + ], + "dna_sequence": "ATGTTATCTGTAGTTAAACCTCTTCAGGAATTTGGTAAGCTCGATAAATGTTTGTCCAGATACGGTACGCGCTTCGAGTTTAATAATGAAAAGCAAGTTATATTTTCCAGTGATGTCAATAACGAAGATACTTTCGTTATTTTAGAGGGAGTTATCTCTCTGCGTAGAGAAGAAAACGTACTTATCGGTATTACCCAGGCTCCTTATATTATGGGGCTGGCTGATGGTTTAATGAAAAACGATATACCATACAAATTAATATCAGAAGGAAATTGTACGGGATATCATCTACCAGCCAAACAAACCATTACGCTTATTGAACAAAATCAACTCTGGCGAGACGCTTTTTACTGGTTAGCCTGGCAAAATAGAATTCTGGAATTACGCGACGTGCAGCTCATTGGGCATAATTCCTACGAACAAATCCGCGCAACATTATTATCAATGATTGACTGGAATGAAGAATTGCGATCACGTATTGGTGTGATGAATTATATCCATCAACGTACACGCATATCGCGTTCTGTCGTCGCAGAAGTTCTCGCTGCTTTGCGTAAAGGCGGCTATATCGAAATGAATAAAGGCAAACTGGTCGCTATCAACCGTTTGCCTTCAGAGTATTAA", + "dna_sequence_length": 624, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_369", + "location": [ + [ + "NC_000913", + 394506, + "+", + 624 + ] + ], + "md5": "8f41b85770a43f21e88378f6cd1bc33a", + "parent_gene": "", + "protein_md5": "ed38d7247e1cb3e9c256040c013699f8", + "protein_translation": "MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY", + "protein_translation_length": 207, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001292" + ], + [ + "gene_synonym", + "ECK0371" + ], + [ + "gene_synonym", + "EcoGene:EG12867" + ], + [ + "gene_synonym", + "GI:16128361" + ], + [ + "gene_synonym", + "GeneID:946904" + ], + [ + "gene_synonym", + "JW5052" + ], + [ + "gene_synonym", + "NP_414910.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD70" + ], + [ + "gene_synonym", + "ampH" + ], + [ + "gene_synonym", + "b0376" + ], + [ + "gene_synonym", + "yaiH" + ] + ], + "dna_sequence": 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"ATGTTTAAGTCTTTTTTCCCAAAGCCGGGAACGTTTTTTCTCTCGGCCTTCGTTTGGGCATTGATTGCCGTTATCTTCTGGCAAGCCGGTGGGGGTGACTGGGTGGCGCGTATCACCGGCGCTTCCGGGCAGATCCCGATTAGCGCCGCGCGTTTCTGGTCGTTGGATTTCCTGATTTTTTACGCTTACTACATTGTTTGCGTAGGACTTTTTGCATTGTTCTGGTTTATCTACAGCCCGCATCGTTGGCAATACTGGTCAATACTCGGTACTGCACTGATCATCTTCGTCACCTGGTTTTTGGTGGAAGTCGGGGTCGCCGTCAACGCCTGGTATGCGCCGTTCTATGATCTGATTCAAACCGCGCTAAGTTCGCCGCATAAAGTCACCATCGAACAATTTTACCGCGAAGTGGGCGTCTTTCTGGGGATTGCGCTGATCGCTGTGGTGATCAGTGTGCTGAACAACTTCTTTGTCAGTCACTACGTGTTCCGCTGGCGTACAGCGATGAACGAATATTACATGGCGAACTGGCAACAACTGCGTCATATCGAAGGGGCCGCACAGCGTGTGCAGGAAGACACCATGCGTTTTGCTTCAACGCTGGAGAATATGGGCGTCAGTTTTATCAACGCCATCATGACGTTGATCGCCTTCCTGCCGGTGCTGGTAACGCTCTCCGCGCATGTGCCGGAGCTGCCGATTATCGGGCACATTCCGTATGGTCTGGTGATTGCCGCAATCGTCTGGTCGCTGATGGGGACCGGATTGCTGGCAGTGGTAGGGATCAAACTGCCGGGGCTGGAGTTTAAAAACCAGCGTGTAGAGGCTGCCTACCGTAAAGAGCTGGTTTATGGTGAAGACGATGCCACGCGCGCGACGCCGCCTACGGTACGCGAGCTGTTTAGCGCCGTACGGAAAAACTATTTCCGCCTCTATTTTCACTATATGTATTTCAACATCGCCCGCATTCTCTATTTGCAGGTCGATAACGTTTTCGGTTTGTTCTTGCTGTTTCCGTCAATTGTTGCCGGTACGATTACGCTCGGCCTGATGACGCAGATTACCAACGTTTTTGGTCAGGTTCGCGGTGCTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAA", 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"MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK", 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"gene_synonym", + "GeneID:945046" + ], + [ + "gene_synonym", + "JW0389" + ], + [ + "gene_synonym", + "NP_414933.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFJ5" + ], + [ + "gene_synonym", + "b0399" + ], + [ + "gene_synonym", + "phoB" + ], + [ + "gene_synonym", + "phoRc" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "GI:16128386" + ], + [ + "gene_synonym", + "GeneID:945042" + ], + [ + "gene_synonym", + "JW0391" + ], + [ + "gene_synonym", + "NP_414935.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD99" + ], + [ + "gene_synonym", + "b0401" + ], + [ + "gene_synonym", + "brnQ" + ], + [ + "gene_synonym", + "hrbA" + ] + ], + "dna_sequence": 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"ECK0396" + ], + [ + "gene_synonym", + "EcoGene:EG13609" + ], + [ + "gene_synonym", + "GI:16128387" + ], + [ + "gene_synonym", + "GeneID:945050" + ], + [ + "gene_synonym", + "JW5055" + ], + [ + "gene_synonym", + "NP_414936.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAE2" + ], + [ + "gene_synonym", + "b0402" + ], + [ + "gene_synonym", + "hisY" + ], + [ + "gene_synonym", + "proY" + ], + [ + "gene_synonym", + "yajM" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:345452716" + ], + [ + "gene_synonym", + "GeneID:949131" + ], + [ + "gene_synonym", + "JW0393" + ], + [ + "gene_synonym", + "NP_414937.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21517" + ], + [ + "gene_synonym", + "b0403" + ], + [ + "gene_synonym", + "malZ" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "ASAP:ABE-0001404" + ], + [ + "gene_synonym", + "ECK0398" + ], + [ + "gene_synonym", + "EcoGene:EG11095" + ], + [ + "gene_synonym", + "GI:16128389" + ], + [ + "gene_synonym", + "GeneID:949132" + ], + [ + "gene_synonym", + "JW0394" + ], + [ + "gene_synonym", + "NP_414938.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21515" + ], + [ + "gene_synonym", + "acpD" + ], + [ + "gene_synonym", + "acpH" + ], + [ + "gene_synonym", + "b0404" + ], + [ + "gene_synonym", + "yajB" + ] + ], + "dna_sequence": "ATGAATTTTTTAGCTCACCTGCATTTAGCCCATCTCGCGGAAAGCTCGCTTTCCGGCAATTTACTGGCTGATTTCGTACGCGGAAATCCTGAAGAAAGTTTTCCGCCCGACGTCGTGGCTGGCATTCATATGCATCGACGTATCGACGTATTGACTGACAATCTGCCGGAAGTCCGCGAAGCACGGGAGTGGTTTCGTAGTGAAACGCGCCGCGTTGCGCCTATTACGCTGGATGTCATGTGGGATCACTTTCTTTCCCGCCACTGGTCGCAGCTGTCGCCGGACTTTCCGCTACAGGAATTTGTCTGTTATGCCCGCGAGCAAGTGATGACGATTTTGCCGGACTCACCGCCACGTTTTATCAATCTGAACAATTACTTGTGGTCAGAGCAGTGGCTGGTGCGCTATCGCGATATGGATTTCATCCAGAACGTGTTAAACGGCATGGCAAGCCGCCGCCCACGTCTGGATGCCCTGCGTGACTCCTGGTACGATTTAGACGCTCATTATGACGCCCTCGAAACCCGCTTCTGGCAGTTTTATCCGCGGATGATGGCGCAGGCGTCACGCAAGGCGTTATAA", + "dna_sequence_length": 582, + "functions": [ + "acyl carrier protein (ACP) phosphodiesterase", + "ACP hydrolyase" + ], + "id": "CDS_397", + "location": [ + [ + "NC_000913", + 424918, + "-", + 582 + ] + ], + "md5": "9ffb26c06aec2303706433d8188cfe6f", + "parent_gene": "", + "protein_md5": "2502d6cf4bbc03565b0eae18159ac0f1", + "protein_translation": "MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHMHRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFVCYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQFYPRMMAQASRKAL", + "protein_translation_length": 193, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001411" + ], + [ + "gene_synonym", + "ECK0399" + ], + [ + "gene_synonym", + "EcoGene:EG10812" + ], + [ + "gene_synonym", + "GI:16128390" + ], + [ + "gene_synonym", + "GeneID:944905" + ], + [ + "gene_synonym", + "JW0395" + ], + [ + "gene_synonym", + "NP_414939.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7F9" + ], + [ + "gene_synonym", + "b0405" + ], + [ + "gene_synonym", + "queA" + ] + ], + "dna_sequence": "ATGCGCGTTACCGATTTCTCCTTTGAATTGCCCGAATCCCTGATTGCCCACTATCCCATGCCTGAACGCAGTAGCTGTCGTTTACTGTCGCTGGACGGGCCGACGGGCGCGCTGACGCACGGTACTTTCACCGATTTACTTGATAAGCTCAACCCCGGCGATCTTCTGGTTTTTAATAATACCCGCGTGATCCCGGCGCGCCTGTTTGGGCGTAAAGCCAGCGGCGGCAAGATTGAAGTGCTGGTTGAACGGATGCTCGACGACAAACGCATTCTTGCGCATATTCGCGCCTCGAAAGCGCCAAAACCTGGCGCAGAACTGCTGCTGGGCGATGACGAAAGTATTAACGCAACAATGACCGCGCGCCACGGCGCACTGTTTGAAGTCGAATTTAATGATGAACGCTCGGTGCTGGATATTCTCAACAGCATCGGCCATATGCCGCTGCCGCCGTATATCGACCGTCCGGACGAAGACGCTGACCGCGAACTTTATCAAACCGTTTATAGCGAAAAACCGGGCGCGGTTGCAGCCCCGACCGCAGGTCTGCATTTTGACGAGCCTTTGCTGGAAAAATTGCGCGCCAAAGGCGTGGAGATGGCGTTTGTGACGTTGCACGTTGGTGCGGGCACCTTCCAGCCGGTGCGCGTCGACACCATTGAAGATCACATCATGCACTCGGAATACGCTGAAGTACCGCAGGATGTGGTAGACGCGGTACTGGCGGCGAAAGCGCGCGGTAACCGGGTGATTGCGGTTGGCACCACTTCAGTACGTTCGCTGGAAAGCGCGGCTCAGGCAGCGAAAAACGATCTCATTGAACCGTTCTTCGACGATACCCAAATCTTTATCTATCCGGGCTTCCAGTACAAAGTGGTCGATGCGCTGGTGACGAACTTCCACTTGCCAGAGTCGACGCTGATTATGCTGGTTTCGGCCTTTGCCGGTTATCAACACACCATGAACGCCTATAAAGCAGCGGTAGAAGAGAAATATCGCTTTTTTAGTTACGGTGATGCGATGTTTATCACGTACAATCCGCAGGCAATTAATGAGCGCGTCGGGGAGTAA", 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], + [ + "gene_synonym", + "JW0396" + ], + [ + "gene_synonym", + "NP_414940.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A847" + ], + [ + "gene_synonym", + "b0406" + ], + [ + "gene_synonym", + "tgt" + ], + [ + "gene_synonym", + "vacC" + ] + ], + "dna_sequence": 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"MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVLPKGTMKAL", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001417" + ], + [ + "gene_synonym", + "ECK0402" + ], + [ + "gene_synonym", + "EcoGene:EG10938" + ], + [ + "gene_synonym", + "GI:16128393" + ], + [ + "gene_synonym", + "GeneID:949133" + ], + [ + "gene_synonym", + "JW0398" + ], + [ + "gene_synonym", + "NP_414942.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG90" + ], + [ + "gene_synonym", + "b0408" + ], + [ + "gene_synonym", + "secD" + ] + ], + "dna_sequence": "GTGTTAAACCGTTATCCTTTGTGGAAGTACGTCATGCTGATCGTGGTGATTGTCATCGGTCTGCTGTATGCGCTTCCCAACCTGTTTGGTGAGGATCCGGCTGTTCAGATCACTGGTGCGCGCGGAGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATAACTGCTAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACTCCACTGACACCCAGTTGCGCGCTCGTGAAGCATTAATGGGCGTTATGGGTGACAAATACGTCGTGGCGCTTAACCTTGCCCCGGCAACGCCGCGCTGGCTGGCAGCTATTCACGCTGAGCCGATGAAGCTCGGCCTTGACCTGCGTGGCGGCGTTCACTTCCTGATGGAAGTGGATATGGACACCGCGCTTGGCAAACTCCAGGAACAAAATATCGATAGCCTACGCAGTGACCTGCGCGAAAAGGGCATCCCGTATACCACTGTTCGTAAAGAAAACAACTACGGCCTGAGCATCACTTTCCGCGATGCTAAAGCTCGTGATGAAGCCATTGCGTATCTGAGCAAGCGCCATCCGGACCTGGTGATTAGCAGCCAGGGCAGCAACCAGCTGCGTGCGGTAATGAGCGATGCTCGTCTGAGTGAAGCGCGTGAATATGCGGTGCAGCAGAACATTAATATCCTGCGTAACCGTGTAAACCAACTTGGCGTGGCGGAGCCGGTGGTTCAGCGTCAGGGTGCTGACCGTATCGTTGTTGAACTGCCAGGTATTCAGGACACTGCGCGTGCGAAAGAGATTCTGGGTGCGACGGCAACGCTGGAATTCCGTCTGGTAAACACCAACGTTGACCAGGCCGCTGCGGCATCCGGTCGCGTACCGGGCGACTCTGAAGTGAAACAGACCCGCGAAGGTCAGCCAGTTGTGCTGTACAAACGCGTAATTCTGACCGGTGACCATATCACCGACTCCACTTCCAGCCAGGACGAATACAACCAACCGCAGGTTAACATCTCGCTCGATAGCGCTGGTGGTAACATCATGTCTAACTTCACTAAGGACAACATCGGCAAACCGATGGCAACCCTGTTTGTGGAGTACAAAGACAGCGGTAAGAAAGATGCAAATGGTCGTGCGGTTCTGGTGAAACAGGAAGAGGTGATTAACATCGCCAACATCCAGTCTCGTCTGGGTAACAGCTTCCGTATCACCGGCATCAACAACCCGAACGAAGCCCGTCAGCTGTCACTGCTGCTGCGTGCCGGTGCGTTGATCGCGCCGATTCAGATTGTTGAAGAACGTACCATTGGCCCAACCCTGGGTATGCAGAACATTGAACAGGGGCTGGAGGCTTGCCTTGCCGGTCTGCTGGTTTCTATTCTGTTCATGATCATCTTCTATAAGAAGTTTGGTCTGATTGCGACCAGTGCTCTGATTGCCAACTTGATCTTAATCGTCGGCATTATGTCGCTGTTGCCAGGCGCAACGCTGAGTATGCCAGGTATCGCGGGTATCGTCTTAACCCTTGCGGTGGCGGTCGATGCGAACGTACTGATCAACGAACGTATTAAAGAAGAGTTGAGCAACGGACGTACTGTTCAACAGGCAATTGATGAAGGTTATCGTGGCGCATTCAGTTCTATCTTCGATGCGAACATCACCACGCTGATTAAAGTCATCATCCTGTACGCAGTGGGTACCGGGGCAATTAAAGGGTTCGCGATTACTACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTGTCGGTACGCGTGCCATCGTAAACCTGCTATATGGCGGCAAGCGCGTCAAGAAGCTGTCAATCTGA", 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[ + "gene_synonym", + "GI:16128425" + ], + [ + "gene_synonym", + "GeneID:949095" + ], + [ + "gene_synonym", + "JW0430" + ], + [ + "gene_synonym", + "NP_414974.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACF4" + ], + [ + "gene_synonym", + "b0440" + ], + [ + "gene_synonym", + "dpeA" + ], + [ + "gene_synonym", + "hopD" + ], + [ + "gene_synonym", + "hupB" + ] + ], + "dna_sequence": "GTGAATAAATCTCAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCAACCCGCAGACCGGTAAAGAGATCACCATCGCTGCTGCTAAAGTACCGAGCTTCCGTGCAGGTAAAGCACTGAAAGACGCGGTAAACTAA", + "dna_sequence_length": 273, + "functions": [ + "HU, DNA-binding transcriptional regulator, beta subunit" + ], + "id": "CDS_433", + "location": [ + [ + "NC_000913", + 461451, + "+", + 273 + ] + ], + "md5": "07f961da3806a711015aa00a7d9b723a", + "parent_gene": "", + "protein_md5": "f008373a488a46c105e95fdfb99fa95a", + 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"modulator of gene expression, with H-NS" + ], + "id": "CDS_452", + "location": [ + [ + "NC_000913", + 480308, + "-", + 219 + ] + ], + "md5": "8fe3797e6376aaf4864bc2420225414a", + "parent_gene": "", + "protein_md5": "12c7241ea3ff19fca3246f734db77c39", + "protein_translation": "MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR", + "protein_translation_length": 72, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001596" + ], + [ + "gene_synonym", + "ECK0455" + ], + [ + "gene_synonym", + "EcoGene:EG12429" + ], + [ + "gene_synonym", + "GI:16128445" + ], + [ + "gene_synonym", + "GeneID:945106" + ], + [ + "gene_synonym", + "JW0450" + ], + [ + "gene_synonym", + "NP_414994.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAR0" + ], + [ + "gene_synonym", + "b0461" + ], + [ + "gene_synonym", + "tomB" + ], + [ + "gene_synonym", + "ybaJ" + ] + ], + "dna_sequence": 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"transcriptional repressor" + ], + "id": "CDS_456", + "location": [ + [ + "NC_000913", + 485761, + "+", + 648 + ] + ], + "md5": "4830743b562913d95b50c732748e8939", + "parent_gene": "", + "protein_md5": "27e8f13d77a01af2c9129bf6c6703e9a", + "protein_translation": "MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVTRGAIYWHFKDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVTEERRRLLMEIIFHKCEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMTRRAAIIMRGYISGLMENWLFAPQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001613" + ], + [ + "gene_synonym", + "ECK0459" + ], + [ + "gene_synonym", + "EcoGene:EG14240" + ], + [ + "gene_synonym", + "GI:16128449" + ], + [ + "gene_synonym", + "GeneID:945132" + ], + [ + "gene_synonym", + "JW0454" + ], + [ + "gene_synonym", + "NP_414998.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77338" + ], + [ + "gene_synonym", + "aefA" + ], + [ + "gene_synonym", + "b0465" + ], + [ + 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phosphoribosyltransferase" + ], + "id": "CDS_461", + "location": [ + [ + "NC_000913", + 491412, + "+", + 552 + ] + ], + "md5": "a0589fa4b57eeb8c24aeb5805d3881f7", + "parent_gene": "", + "protein_md5": "6d41a83e06643bdacab599c5dd5ed77c", + "protein_translation": "MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGITSYSLVPFPGH", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001633" + ], + [ + "gene_synonym", + "ECK0464" + ], + [ + "gene_synonym", + "EcoGene:EG10245" + ], + [ + "gene_synonym", + "GI:16128454" + ], + [ + "gene_synonym", + "GeneID:945105" + ], + [ + "gene_synonym", + "JW0459" + ], + [ + "gene_synonym", + "NP_415003.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06710" + ], + [ + "gene_synonym", + "b0470" + ], + [ + "gene_synonym", + "dnaX" + ], + [ + "gene_synonym", + "dnaZ" + ] + ], 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"ASAP:ABE-0001670" + ], + [ + "gene_synonym", + "ECK0475" + ], + [ + "gene_synonym", + "EcoGene:EG12454" + ], + [ + "gene_synonym", + "GI:16128465" + ], + [ + "gene_synonym", + "GeneID:947083" + ], + [ + "gene_synonym", + "JW0470" + ], + [ + "gene_synonym", + "NP_415014.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAR3" + ], + [ + "gene_synonym", + "b0481" + ], + [ + "gene_synonym", + "proX" + ], + [ + "gene_synonym", + "ybaK" + ] + ], + "dna_sequence": "ATGACACCCGCAGTTAAATTACTCGAAAAAAACAAGATTTCGTTTCAAATCCATACCTACGAGCACGATCCGGCTGAAACCAATTTTGGCGATGAAGTCGTCAAAAAATTAGGTTTGAATCCGGATCAGGTCTACAAAACGCTGCTGGTGGCAGTGAACGGTGATATGAAACACCTTGCCGTGGCCGTTACGCCGGTCGCAGGTCAACTGGATCTTAAAAAAGTAGCAAAAGCGCTGGGTGCCAAGAAAGTTGAGATGGCCGATCCGATGGTCGCGCAGCGTTCGACGGGATACCTGGTTGGGGGGATTAGCCCACTGGGGCAGAAAAAACGTCTGCCAACGATTATCGACGCCCCCGCACAAGAATTTGCCACTATTTATGTTTCCGGCGGCAAGCGCGGACTGGATATCGAACTGGCGGCAGGCGATCTGGCAAAGATCCTCGATGCCAAATTTGCTGATATCGCCCGCCGCGATTAA", + "dna_sequence_length": 480, + "functions": [ 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"EcoGene:EG13246" + ], + [ + "gene_synonym", + "GI:16128468" + ], + [ + "gene_synonym", + "GeneID:946106" + ], + [ + "gene_synonym", + "JW0473" + ], + [ + "gene_synonym", + "NP_415017.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q59385" + ], + [ + "gene_synonym", + "b0484" + ], + [ + "gene_synonym", + "copA" + ], + [ + "gene_synonym", + "ybaR" + ] + ], + "dna_sequence": 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"protein_translation": "MMNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMSASAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVPLLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS", + "protein_translation_length": 208, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001717" + ], + [ + "gene_synonym", + "ECK0489" + ], + [ + "gene_synonym", + "EcoGene:EG11657" + ], + [ + "gene_synonym", + "GI:16128479" + ], + [ + "gene_synonym", + "GeneID:945122" + ], + [ + "gene_synonym", + "JW0484" + ], + [ + "gene_synonym", + "NP_415028.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9T8" + ], + [ + "gene_synonym", + "b0495" + ], + [ + "gene_synonym", + "ybbA" + ] + ], + "dna_sequence": "ATGCCAGCGGAAAACATTGTTGAAGTTCATCATCTTAAGAAGTCCGTCGGTCAGGGGGAGCATGAACTCTCCATCCTCACCGGAGTTGAGCTGGTTGTCAAACGTGGCGAGACCATCGCACTGGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTACCCTTAACGCGCTGGAAAACGTCGAGCTTCCGGCTCTGCTGCGCGGTGAGAGTAGCGCGGAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGCTGGGTAAACGTCTGGATCATCTTCCGGCACAGCTTTCCGGCGGTGAACAGCAACGAGTGGCGCTGGCACGAGCCTTTAATGGTCGACCTGATGTGCTGTTTGCCGACGAACCCACCGGCAACCTTGACCGCCAGACGGGCGATAAAATTGCCGACCTGCTGTTTTCCCTCAACCGTGAACATGGCACCACGTTGATTATGGTGACCCACGACCTGCAACTGGCGGCACGCTGCGACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGA", + "dna_sequence_length": 687, + "functions": [ + "putative ABC transporter ATPase" + ], + "id": "CDS_487", + "location": [ + [ + "NC_000913", + 519733, + "+", + 687 + ] + ], + "md5": "890706ea5a4f8c4464e171e46e653083", + "parent_gene": "", + "protein_md5": "4f52cdecd6ba96f0da8386afa0a8d56d", + "protein_translation": "MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLRLVNGQLQEEA", + "protein_translation_length": 228, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001720" + ], + [ + "gene_synonym", + "ECK0490" + ], + [ + "gene_synonym", + "EcoGene:EG13263" + ], + [ + "gene_synonym", + "GI:16128480" + ], + [ + "gene_synonym", + "GeneID:945118" + ], + [ + "gene_synonym", + "JW0485" + ], + [ + "gene_synonym", + "NP_415029.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77504" + ], + [ + "gene_synonym", + "b0496" + ], + [ + "gene_synonym", + "ybbP" + ] + ], + "dna_sequence": 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"MIARWFWREWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLSQQSREFMAGDRALRSSREVPQAWLEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAVDDIYPMYGDLQTNPPGLKPQAGSVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVIQEPDSGFNPFQMAPRLMMNLADVDKTGAVQPGSRVTWRYKFGGNENQLDGYEKWLLPQLKPEQRWYGLEQDEGALGRSMERSQQFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAILKTLGAGRAQLRKLIVGQWLMVLTLSAVTGGAIGLLFENVLMVLLKPVLPAALPPASLWPWLWALGTMTVISLLVGLRPYRLLLATQPLRVLRNDVVANVWPLKFYLPIVSVVVVLLLAGLMGGSMLLWAVLAGAVVLALLCGVLGWMLLNVLRRMTLKSLPLRLAVSRLLRQPWSTLSQLSAFSLSFMLLALLLVLRGDLLDRWQQQLPPESPNYFLINIATEQVAPLKAFLAEHQIVPESFYPVVRARLTAINDKPTEGNEDEALNRELNLTWQNTRPDHNPIVAGNWPPKADEVSMEEGLAKRLNVALGDTVTFMGDTQEFRAKVTSLRKVDWESLRPNFYFIFPEGALDGQPQSWLTSFRWENGNGMLTQLNRQFPTISLLDIGAILKQVGQVLEQVSRALEVMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRTLGAGKKLLRTTLWCEFAMLGFVSGLVAAIGAETALAVLQAKVFDFPWEPDWRLWIVLPCSGALLLSLFGGWLGARLVKGKALFRQFAG", + "protein_translation_length": 804, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001724" + ], + [ + "gene_synonym", + "ECK0491" + ], + [ + "gene_synonym", + "EcoGene:EG10849" + ], + [ + "gene_synonym", + "GI:16128481" + ], + [ + "gene_synonym", + "GeneID:945116" + ], + [ + "gene_synonym", + "JW0486" + ], + [ + "gene_synonym", + "NP_415030.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16919" + ], + [ + "gene_synonym", + "b0497" + ], + [ + "gene_synonym", + "rhsD" + ] + ], + "dna_sequence": "ATGAGCGGAAAACCAGCGGCGCGTCAGGGAGATATGACTCAGTATGGCGGTCCCATTGTCCAGGGTTCGGCAGGTGTAAGAATTGGCGCGCCCACCGGCGTGGCGTGCTCGGTGTGTCCGGGCGGGATGACTTCGGGCAACCCGGTAAATCCGCTGCTGGGGGCGAAGGTGCTGCCCGGCGAGACGGACCTTGCGCTGCCCGGCCCGCTGCCGTTCATTCTCTCCCGCACCTACAGCAGCTACCGGACGAAGACGCCTGCACCGGTGGGCGTTTTCGGCCCCGGCTGGAAAGCGCCTTCTGATATCCGCTTACAGCTACGTGATGACGGACTGATACTCAACGACAACGGCGGGCGGAGCATTCACTTTGAGCCGCTGCTGCCGGGGGAGGCGGTGTACAGCCGCAGTGAGTCAATGTGGCTGGTGCGCGGTGGTAAGGCAGCACAGCCGGACGGCCATACGCTGGCGCGGCTGTGGGGGGCGCTGCCGCCGGATATCCGGTTAAGCCCGCATCTTTACCTGGCGACCAACAGCGCACAGGGGCCGTGGTGGATACTGGGGTGGTCTGAGCGGGTGCCGGGTGCTGAGGACGTACTGCCAGCGCCGCTGCCGCCGTACCGGGTGCTTACCGGGATGGCGGACCGCTTCGGGCGGACGCTGACGTACCGGCGTGAGGCCGCCGGTGACCTGGCCGGGGAAATCACCGGCGTGACGGACGGTGCCGGGCGGGAGTTCCGTCTGGTGCTGACCACGCAGGCGCAGCGTGCGGAAGAGGCCCGCACCTCTTCGCTATCTTCTTCTGACAGTTCCCGCCCTCTCTCAGCCTCAGCGTTCCCCGACACACTGCCCGGTACCGAATACGGCCCCGACAGGGGTATCCGCCTTTCGGCGGTGTGGCTGATGCACGACCCGGCATACCCGGAGAGCCTGCCCGCTGCGCCACTGGTGCGGTACACGTATACGGAAGCCGGTGAACTGCTGGCGGTATATGACCGCAGCAATACGCAGGTGCGCGCTTTCACGTATGACGCGCAGCACCCGGGCCGGATGGTGGCGCACCGTTACGCGGGAAGGCCGGAGATGCGCTACCGCTACGACGATACGGGGCGGGTGGTGGAGCAACTGAACCCGGCAGGGTTAAGCTACCGCTATCTTTATGAGCAGGACCGCATCACCGTCACCGACAGCCTGAACCGGCGTGAGGTGCTGCATACAGAAGGCGGGGCCGGGCTGAAACGGGTGGTGAAAAAAGAACTGGCGGACGGCAGCGTCACGCGCAGCGGGTATGACGCGGCAGGAAGGCTCACGGCGCAGACGGACGCGGCGGGACGGAGGACAGAGTACGGTCTGAATGTGGTGTCCGGCGATATCACGGACATCACCACACCGGACGGGCGGGAGACGAAATTTTACTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGCGACGACAACGGATGCGACGGGCAGCACCCGGCAGATGACCTGGAGCCGCTACGGGCAGTTGCTGGCGTTCACCGACTGCTCGGGCTACCAGACCCGTTATGAATACGACCGCTTCGGCCAGATGACGGCGGTCCACCGCGAGGAAGGCATCAGCCTTTACCGCCGCTATGACAACCGTGGCCGGTTAACCTCGGTGAAAGACGCACAGGGCCGTGAAACGCGGTATGAATACAACGCCGCAGGCGACCTGACTGCCGTTATCACCCCGGACGGCAACCGGAGCGAGACACAGTACGATGCGTGGGGAAAGGCGGTCAGCACCACGCAGGGCGGGCTGACGCGCAGTATGGAGTACGATGCTGCCGGACGTGTCATCAGCCTGACCAACGAGAACGGCAGCCACAGCGTCTTCAGTTACGATGCGCTGGACCGGCTGGTACAGCAGGGCGGCTTTGACGGGCGGACGCAACGTTATCATTATGACCTGACCGGAAAACTCACACAGAGTGAGGATGAGGGACTTGTCATCCTCTGGTACTACGATGAATCGGACCGTATCACTCACCGCACGGTGAACGGCGAACCGGCAGAGCAGTGGCAGTATGATGGCCACGGCTGGCTGACAGACATCAGCCACCTGAGCGAAGGCCACCGTGTTGCCGTCCACTATGGCTATGACGATAAAGGCCGCCTGACCGGCGAATGCCAGACGGTGGAGAACCCGGAGACGGGGGAACTGCTGTGGCAGCATGAGACGAAACACGCATACAACGAGCAGGGGCTGGCAAACCGCGTCACGCCGGACAGCCTGCCGCCGGTGGAGTGGCTGACGTATGGCAGCGGTTACCTGGCGGGAATGAAGCTGGGCGGGACGCCGCTGGTCGAGTATACGCGGGACAGGCTGCACCGTGAGACGGTGCGCAGCTTCGGCAGCATGGCAGGCAGTAATGCCGCATACGAACTGACCAGCACATACACCCCCGCAGGCCAGTTACAGAGCCAGCACCTGAACAGCCTGGTATATGACCGTGACTACGGGTGGAGTGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGCACCAGACCTGGACATCCGCATCCCGTATGCCACGGACCCGGCGGGCAACCGGCTGCCGGACCCGGAGCTGCACCCGGACAGTACACTCACAGTGTGGCCGGATAACCGCATCGCGGAGGATGCGCACTATGTCTACCGCCACGATGAATACGGCAGGCTGACGGAGAAGACGGACCGCATCCCGGCGGGTGTGATACGGACGGACGACGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGCTGGGACGGAGACAGGCTGACGACGGTGCAGACTGACACCACACGTATCCAGACGGTATACGAGCCGGGAAGCTTCACGCCGCTCATCCGGGTCGAGACAGAGAACGGCGAGCGGGAAAAAGCGCAGCGGCGCAGCCTGGCAGAGACGCTCCAGCAGGAAGGGAGTGAGAACGGCCACGGCGTGGTGTTCCCGGCTGAACTGGTGCGGCTGCTGGACAGGCTGGAGGAAGAAATCCGGGCAGACCGCGTGAGCAGTGAAAGCCGGGCGTGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGCGACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGTTGCAGGGGCGGTATATTACTCAGGACCCGATGGGGTTGAAAGGGGGATGGAATTTATATCAGTATCCTTTAAATCCACTACAACAAATTGACCCTATGGGATTATTGCAGACTTGGGATGATGCCAGATCTGGAGCATGTACGGGGGGAGTTTGTGGTGTTCTTTCACGTATAATAGGACCAAGTAAATTTGATAGTACTGCAGATGCTGCGTTAGATGCTTTGAAAGAAACGCAGAATAGATCTCTATGTAATGATATGGAATACTCTGGTATTGTCTGTAAAGATACTAATGGAAAATATTTTGCATCTAAGGCAGAAACTGATAATTTAAGAAAGGAGTCATATCCTCTGAAAAGAAAATGTCCCACAGGTACAGATAGAGTTGCTGCTTATCATACTCACGGTGCAGATAGTCATGGCGATTATGTTGATGAATTTTTTTCAAGTAGCGATAAAAATCTTGTAAGAAGTAAAGATAATAATCTTGAAGCATTTTATCTCGCAACACCTGATGGACGATTTGAGGCGCTTAATAATAAAGGAGAATATATTTTTATCAGAAATAGTGTCCCGGGATTGAGTTCAGTATGCATACCGTATCATGATTAA", 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"gene_synonym", + "b0511" + ], + [ + "gene_synonym", + "glxB2" + ], + [ + "gene_synonym", + "ybbW" + ] + ], + "dna_sequence": 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"EcoGene:EG13619" + ], + [ + "gene_synonym", + "GI:16128496" + ], + [ + "gene_synonym", + "GeneID:945134" + ], + [ + "gene_synonym", + "JW0500" + ], + [ + "gene_synonym", + "NP_415045.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77671" + ], + [ + "gene_synonym", + "allB" + ], + [ + "gene_synonym", + "b0512" + ], + [ + "gene_synonym", + "glxB3" + ], + [ + "gene_synonym", + "ybbX" + ] + ], + "dna_sequence": 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"GI:90111145" + ], + [ + "gene_synonym", + "GeneID:945131" + ], + [ + "gene_synonym", + "JW0501" + ], + [ + "gene_synonym", + "NP_415046.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77328" + ], + [ + "gene_synonym", + "b0513" + ], + [ + "gene_synonym", + "glxB4" + ], + [ + "gene_synonym", + "ybbY" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW0503" + ], + [ + "gene_synonym", + "NP_415048.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75713" + ], + [ + "gene_synonym", + "allE" + ], + [ + "gene_synonym", + "b0515" + ], + [ + "gene_synonym", + "glxB6" + ], + [ + "gene_synonym", + "ughY" + ], + [ + "gene_synonym", + "ylbA" + ] + ], + "dna_sequence": "ATGGGATATTTAAATAACGTCACCGGTTACCGCGAAGATTTACTGGCTAACCGTGCGATTGTTAAACACGGTAATTTCGCACTGTTAACCCCGGATGGTCTGGTAAAAAATATTATTCCGGGCTTTGAAAATTGTGACGCGACAATCCTCTCCACGCCAAAGCTGGGTGCCTCTTTTGTTGATTATCTGGTCACACTGCATCAAAACGGTGGCAACCAACAGGGCTTCGGTGGCGAAGGCATTGAAACGTTCCTGTATGTGATCTCTGGAAATATCACTGCCAAAGCCGAAGGCAAAACATTTGCCTTAAGCGAAGGTGGCTATCTTTATTGCCCGCCAGGCTCCTTAATGACGTTTGTTAACGCCCAGGCCGAAGACAGCCAAATCTTTTTATATAAGCGCCGCTATGTTCCGGTAGAAGGCTATGCACCGTGGCTGGTTTCTGGCAATGCCAGCGAACTGGAACGCATTCATTATGAAGGCATGGACGATGTTATTCTGCTGGATTTTCTGCCCAAAGAGTTAGGTTTTGATATGAACATGCATATCCTCTCTTTTGCACCAGGTGCCAGCCACGGTTATATCGAAACACACGTTCAGGAACACGGTGCCTATATTCTTTCCGGTCAGGGGGTTTATAACCTCGACAATAACTGGATCCCGGTGAAAAAAGGCGATTACATCTTTATGGGCGCTTATTCTTTACAGGCTGGTTATGGTGTAGGGCGTGGTGAAGCGTTCAGCTATATTTACTCGAAAGATTGTAACCGCGACGTAGAGATTTAA", + "dna_sequence_length": 786, + "functions": [ + "S-ureidoglycine aminohydrolase" + ], + "id": "CDS_506", + "location": [ + [ + "NC_000913", + 544046, + "-", + 786 + ] + ], + "md5": "a9e5cd4ebf3e938b8419ca1eb159114b", + "parent_gene": "", + "protein_md5": "9653e1d8690b5d25bdda3e247f40cca6", + "protein_translation": "MGYLNNVTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGYAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001777" + ], + [ + "gene_synonym", + "ECK0509" + ], + [ + "gene_synonym", + "EcoGene:EG13623" + ], + [ + "gene_synonym", + "GI:16128500" + ], + [ + "gene_synonym", + "GeneID:945150" + ], + [ + "gene_synonym", + "JW0504" + ], + [ + "gene_synonym", + "NP_415049.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77425" + ], + [ + "gene_synonym", + "allC" + ], + [ + "gene_synonym", + "b0516" + ], + [ + "gene_synonym", + "glxB7" + ], + [ + "gene_synonym", + "ylbB" + ] + ], + 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"ATGATTACACATTTCCGTCAAGCTATAGAAGAAACGCTGCCCTGGCTTTCCTCTTTTGGCGCTGACCCAGCGGGTGGGATGACCCGTTTACTTTATTCGCCGGAATGGCTGGAAACCCAGCAGCAATTTAAAAAAAGAATGGCAGCAAGCGGGCTGGAAACACGTTTCGATGAAGTGGGGAATTTATACGGTCGCCTGAATGGCACCGAATATCCACAGGAAGTGGTTCTGAGCGGTTCGCATATCGATACCGTGGTTAACGGCGGTAACCTTGACGGGCAATTCGGCGCGCTGGCGGCGTGGCTGGCAATTGACTGGCTGAAAACGCAATACGGCGCGCCGCTACGTACGGTCGAAGTGGTGGCGATGGCAGAAGAAGAAGGCAGCCGCTTCCCGTATGTCTTCTGGGGCAGTAAAAATATTTTTGGGCTGGCGAATCCTGACGACGTGCGGAATATCTGTGATGCCAAAGGAAATAGTTTTGTCGATGCGATGAAGGCTTGCGGATTTACTCTTCCGAACGCCCCACTAACTCCGCGTCAGGATATTAAAGCCTTTGTTGAACTGCATATTGAACAGGGCTGTGTGCTGGAAAGTAATGGGCAATCAATTGGCGTGGTGAATGCAATTGTCGGGCAGCGTCGTTATACGGTAACGCTGAACGGCGAATCAAACCATGCAGGCACCACGCCGATGGGTTATCGTCGTGATACAGTTTACGCTTTCAGTCGCATTTGCCATCAGTCGGTCGAAAAAGCGAAAAGGATGGGCGATCCGCTGGTTCTGACCTTTGGCAAAGTAGAGCCGCGCCCGAATACGGTAAATGTGGTGCCGGGTAAAACCACGTTCACCATTGATTGTCGTCATACCGACGCTGCCGTGCTGCGCGATTTCACCCAACAGTTAGAAAACGACATGCGGGCGATTTGCGATGAAATGGACATTGGTATTGATATCGATTTATGGATGGACGAAGAACCCGTGCCGATGAATAAGGAGCTGGTCGCCACCCTGACAGAATTGTGTGAAAGAGAAAAACTGAATTACCGGGTGATGCACAGTGGTGCCGGGCACGACGCGCAAATTTTCGCGCCTCGCGTACCAACCTGCATGATTTTTATCCCCAGCATCAACGGGATCAGCCATAACCCGGCGGAACGCACCAATATTACCGACCTTGCCGAAGGGGTCAAAACGTTGGCACTCATGCTTTATCAACTTGCCTGGCAGAAATAA", 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"gene_synonym", + "GeneID:948342" + ], + [ + "gene_synonym", + "JW0505" + ], + [ + "gene_synonym", + "NP_415050.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77555" + ], + [ + "gene_synonym", + "allD" + ], + [ + "gene_synonym", + "b0517" + ], + [ + "gene_synonym", + "glxB8" + ], + [ + "gene_synonym", + "ylbC" + ] + ], + "dna_sequence": "ATGAAAATCAGTCGGGAAACACTCCACCAGCTAATTGAGAATAAACTCTGCCAGGCTGGGTTAAAACGTGAGCACGCTGCAACCGTGGCTGAAGTATTGGTTTACGCCGATGCCAGAGGGATCCACTCTCATGGCGCGGTGCGCGTGGAATACTACGCGGAACGCATTTCAAAAGGCGGCACCAACCGCGAACCGGAGTTTCGTCTTGAGGAAACCGGGCCGTGCTCGGCAATTTTACATGCCGACAATGCCGCCGGACAGGTCGCGGCGAAAATGGGTATGGAACATGCCATCAAAACCGCCCAGCAAAATGGCGTTGCGGTGGTCGGTATCAGCCGGATGGGTCACAGCGGCGCAATCTCTTATTTTGTGCAGCAGGCAGCCCGCGCCGGATTCATTGGCATTTCGATGTGCCAGTCCGATCCAATGGTGGTGCCGTTTGGCGGCGCGGAAATTTACTACGGTACTAACCCCCTGGCCTTTGCCGCGCCGGGAGAAGGCGACGAGATCCTTACCTTTGATATGGCGACTACCGTACAGGCATGGGGAAAAGTGCTCGACGCCCGCTCGCGTAATATGTCTATCCCGGATACCTGGGCGGTCGATAAAAACGGTGTACCAACAACCGATCCGTTCGCGGTACATGCTCTGCTCCCCGCCGCCGGGCCAAAAGGGTATGGCCTGATGATGATGATTGACGTCCTCTCAGGCGTCTTACTCGGCTTACCGTTCGGGCGACAGGTTAGTTCGATGTATGACGATTTACACGCAGGGCGTAATTTGGGGCAATTACATATAGTTATTAATCCGAACTTTTTCTCCTCCAGCGAATTATTCCGTCAACATCTTAGCCAGACCATGCGCGAATTAAATGCCATTACCCCCGCGCCCGGTTTTAATCAGGTTTATTATCCCGGACAGGATCAGGATATTAAACAACGCAAAGCCGCCGTCGAAGGCATCGAAATTGTTGATGATATTTACCAGTATTTAATTTCCGACGCGCTTTATAACACGTCATACGAAACGAAAAATCCCTTTGCGCAATAA", 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"JW0506" + ], + [ + "gene_synonym", + "NP_415051.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47208" + ], + [ + "gene_synonym", + "b0518" + ], + [ + "gene_synonym", + "fdrA" + ], + [ + "gene_synonym", + "ylbD" + ] + ], + "dna_sequence": "ATGATCCACGCCTTTATTAAAAAAGGGTGTTTTCAGGATTCGGTCAGTTTAATGATTATTTCACGAAAACTCAGCGAATCAGAAAATGTTGATGATGTTTCCGTAATGATGGGTACGCCCGCCAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAAGAGGCGCTAAAACAACTGGCGCAGGGGTCAGGCAGCAGCCAGGCGTTGACGCAGGTGCGTCGCTGGGACAGTGCCTGTCAGAAATTACCCGATGCCAATCTGGCGCTGATTTCAGTGGCTGGCGAGTATGCGGCGGAGCTGGCAAACCAGGCGCTGGATCGCAACCTCAACGTGATGATGTTCTCCGATAACGTCACGCTGGAAGATGAAATCCAACTTAAAACCCGCGCGCGGGAAAAAGGCTTGCTGGTGATGGGGCCGGACTGCGGTACGTCGATGATTGCCGGCACACCGCTGGCTTTTGCTAACGTGATGCCGGAAGGCAATATTGGCGTCATTGGCGCTTCCGGTACCGGGATTCAGGAGCTGTGTTCGCAGATTGCGCTGGCAGGGGAGGGAATTACTCACGCGATTGGCCTTGGCGGGCGCGACCTCAGCCGTGAAGTGGGCGGCATCAGTGCGCTAACAGCGCTGGAAATGCTCAGTGCAGACGAGAAAAGCGAAGTGCTGGCATTTGTTTCAAAACCACCTGCCGAAGCTGTGCGTCTGAAAATTGTTAATGCCATGAAAGCAACCGGCAAACCGACGGTGGCGCTGTTTTTAGGTTATACCCCGGCGGTGGCCCGCGACGAGAATGTCTGGTTTGCCTCCTCGCTGGATGAGGCCGCACGCCTGGCTTGCCTGCTTTCACGCGTCACGGCGCGACGTAACGCAATAGCGCCTGTCAGCAGCGGATTTATTTGCGGTTTGTATACCGGCGGTACGCTGGCTGCCGAAGCGGCGGGATTACTTGCCGGACACCTTGGCGTGGAAGCCGACGATACCCATCAACATGGCATGATGCTGGACGCCGATAGCCACCAGATTATTGACCTCGGCGATGATTTCTACACCGTCGGGCGTCCCCATCCGATGATCGACCCAACCTTACGCAACCAGTTAATTGCCGATCTCGGCGCTAAACCGCAAGTGCGCGTGTTGCTGCTTGATGTCGTGATTGGCTTCGGTGCGACCGCCGATCCTGCCGCCTCGCTGGTGAGCGCCTGGCAAAAAGCCTGTGCCGCGCGTTTAGATAATCAACCACTGTATGCCATTGCCACGGTGACAGGCACTGAACGTGACCCGCAATGCCGCTCGCAGCAAATCGCCACGCTGGAAGATGCGGGGATTGCGGTCGTGAGTTCGCTACCGGAAGCCACCTTGCTGGCGGCAGCGTTAATTCATCCGCTCTCGCCTGCCGCACAGCAACACACACCGTCATTACTGGAAAACGTCGCCGTGATTAACATCGGATTACGCAGCTTTGCGCTGGAGCTACAAAGCGCCAGCAAACCGGTTGTGCATTACCAATGGTCGCCAGTCGCCGGTGGCAATAAAAAACTGGCTCGTTTATTAGAACGTTTGCAATAA", + "dna_sequence_length": 1668, + "functions": [ + "putative NAD(P)-binding acyl-CoA synthetase" + ], + "id": "CDS_509", + "location": [ + [ + "NC_000913", + 546680, + "+", + 1668 + ] + ], + "md5": "8e26a98cbe3c3e0a22b9586ec3689906", + "parent_gene": "", + "protein_md5": "158c8cf7e75062826c115ddb3eb90f36", + "protein_translation": "MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSPAAQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ", + "protein_translation_length": 555, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0001787" + ], + [ + "gene_synonym", + "ASAP:ABE-0285028" + ], + [ + "gene_synonym", + "ASAP:ABE-0285105" + ], + [ + "gene_synonym", + "ECK0512" + ], + [ + "gene_synonym", + "EcoGene:EG13398" + ], + [ + "gene_synonym", + "GI:635341461" + ], + [ + "gene_synonym", + "GeneID:4056025" + ], + [ + "gene_synonym", + "JW0507" + ], + [ + "gene_synonym", + "JW0508" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77129" + ], + [ + "gene_synonym", + "YP_009029994.1" + ], + [ + "gene_synonym", + "b4572" + ], + [ + "gene_synonym", + "ylbE" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P0ABW5" + ], + [ + "gene_synonym", + "b0530" + ], + [ + "gene_synonym", + "fimA" + ], + [ + "gene_synonym", + "sfmA" + ] + ], + "dna_sequence": "ATGAAATTAAGATTTATTTCGTCTGCGCTGGCTGCCGCACTATTCGCCGCTACGGGTAGTTATGCTGCCGTTGTAGATGGCGGTACAATTCACTTTGAAGGCGAACTGGTGAATGCTGCCTGTTCAGTGAATACTGACTCGGCAGACCAGGTTGTCACACTCGGTCAATATCGTACCGATATTTTCAATGCTGTTGGTAATACCTCTGCATTAATTCCATTCACCATTCAGTTGAACGACTGCGATCCTGTTGTTGCCGCTAATGCTGCCGTTGCATTTTCTGGTCAGGCTGATGCAATCAATGATAATTTATTGGCCATTGCATCCAGTACCAATACAACAACAGCAACGGGTGTCGGTATTGAAATACTTGATAATACATCCGCAATTCTCAAACCTGATGGGAATAGCTTCTCAACCAACCAGAACTTGATCCCCGGGACCAACGTTCTTCATTTTTCTGCACGTTATAAAGGCACCGGTACAAGTGCATCAGCAGGGCAAGCAAATGCTGACGCGACTTTTATTATGAGATATGAATAA", + "dna_sequence_length": 543, + "functions": [ + "FimA homolog, function unknown" + ], + "id": "CDS_521", + "location": [ + [ + "NC_000913", + 558212, + "+", + 543 + ] + ], + "md5": "7b688357ba2baf75b57377617fb96ce8", + "parent_gene": "", + "protein_md5": 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"gene_synonym", + "NP_415098.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10805" + ], + [ + "gene_synonym", + "b0566" + ], + [ + "gene_synonym", + "envY" + ] + ], + "dna_sequence": "ATGCAATTGAGCAGCAGTGAACCTTGCGTGGTGATCCTGACCGAAAAAGAGGTAGAGGTAAGCGTCAATAACCATGCTACGTTTACCCTTCCGAAAAACTACCTGGCCGCCTTCGCGTGCAACAATAACGTCATTGAACTCTCAACGTTAAATCACGTATTAATCACCCACATCAACCGTAACATCATCAACGATTATCTGTTGTTTTTAAATAAGAACTTAACCTGTGTAAAGCCCTGGTCGCGGCTGGCAACCCCGGTTATCGCTTGTCATAGCCGTACACCGGAAGTGTTCCGGCTAGCCGCCAACCACAGCAAGCAGCAACCCAGCAGACCCTGCGAAGCGGAGTTGACGCGCGCATTGCTTTTTACCGTATTGTCTAACTTTCTTGAGCAATCGCGGTTTATTGCCCTACTGATGTATATCTTACGCAGCAGCGTCCGCGACAGCGTCTGCCGCATTATTCAAAGCGATATTCAGCATTACTGGAATCTGCGAATTGTCGCCAGTTCGCTATGTTTAAGCCCCAGCCTGCTCAAAAAGAAATTAAAAAACGAAAATACCAGCTATAGCCAGATTGTCACAGAGTGTCGTATGCGTTACGCCGTACAGATGTTATTGATGGATAACAAAAATATCACTCAGGTGGCGCAATTATGTGGCTATAGCAGCACGTCGTACTTTATCTCTGTTTTTAAGGCGTTTTACGGCCTGACACCGTTGAATTATCTCGCCAAACAGCGACAAAAAGTGATGTGGTGA", + "dna_sequence_length": 762, + 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], + [ + "gene_synonym", + "GeneID:945978" + ], + [ + "gene_synonym", + "JW5082" + ], + [ + "gene_synonym", + "NP_415102.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77485" + ], + [ + "gene_synonym", + "b0570" + ], + [ + "gene_synonym", + "cusS" + ], + [ + "gene_synonym", + "silS" + ], + [ + "gene_synonym", + "ybcZ" + ] + ], + "dna_sequence": 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"ECK0563" + ], + [ + "gene_synonym", + "EcoGene:EG13851" + ], + [ + "gene_synonym", + "GI:16128554" + ], + [ + "gene_synonym", + "GeneID:945003" + ], + [ + "gene_synonym", + "JW0560" + ], + [ + "gene_synonym", + "NP_415103.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACZ8" + ], + [ + "gene_synonym", + "b0571" + ], + [ + "gene_synonym", + "cusR" + ], + [ + "gene_synonym", + "silR" + ], + [ + "gene_synonym", + "ylcA" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16128560" + ], + [ + "gene_synonym", + "GeneID:946243" + ], + [ + "gene_synonym", + "JW0566" + ], + [ + "gene_synonym", + "NP_415109.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAT4" + ], + [ + "gene_synonym", + "b0577" + ], + [ + "gene_synonym", + "mscM" + ], + [ + "gene_synonym", + "ybdG" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0002052" + ], + [ + "gene_synonym", + "ECK0588" + ], + [ + "gene_synonym", + "EcoGene:EG10260" + ], + [ + "gene_synonym", + "GI:16128578" + ], + [ + "gene_synonym", + "GeneID:946178" + ], + [ + "gene_synonym", + "JW0587" + ], + [ + "gene_synonym", + "NP_415127.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADI4" + ], + [ + "gene_synonym", + "b0595" + ], + [ + "gene_synonym", + "entB" + ], + [ + "gene_synonym", + "entG" + ] + ], + "dna_sequence": 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"JW0593" + ], + [ + "gene_synonym", + "NP_415133.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77806" + ], + [ + "gene_synonym", + "b0600" + ], + [ + "gene_synonym", + "ybdL" + ] + ], + "dna_sequence": 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"GeneID:945206" + ], + [ + "gene_synonym", + "JW0594" + ], + [ + "gene_synonym", + "NP_415134.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77174" + ], + [ + "gene_synonym", + "b0601" + ], + [ + "gene_synonym", + "ybdM" + ] + ], + "dna_sequence": "ATGGGGGATACTATGCAACAACGATTAACGCAGGATTTAACGCAATTTCTCGCCAGCTTGCCGGAAGATGATCGCATCAAAGCGATTAATGAAATCCGCATGGCGATCCATCAGGTTAGCCCCTTTCGTGAAGAGCCAGTGGATTGCGTTCTGTGGGTTAAAAACAGCCAACTTATGCCTAATGATTACAACCCAAACAACGTGGCACCACCCGAAAAAAAACTGCTGCAAAAATCCATTGAAATAGATGGTTTTACCCAACCCATTGTGGTCACACATACGGATAAAAATGCCATGGAAATCGTGGATGGTTTTCACCGCCATGAAATTGGTAAAGGCTCATCATCATTAAAATTACGCTTAAAAGGTTATTTGCCGGTGACCTGTCTGGAAGGTACGCGTAATCAACGCATCGCCGCGACTATTCGTCATAATCGCGCTCGTGGACGCCATCAAATCACCGCCATGTCGGAAATCGTCCGTGAACTTAGCCAGTTGGGATGGGACGATAATAAAATTGGCAAAGAGCTGGGAATGGACAGCGACGAAGTGCTGCGCCTGAAGCAAATTAACGGCCTGCAAGAGTTGTTTGCCGACCGTCAATATTCCCGCGCCTGGACGGTTAAATAG", + "dna_sequence_length": 630, + "functions": [ + "Spo0J family protein, ParB-like nuclease domain" + ], + 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"gene_synonym", + "b0604" + ], + [ + "gene_synonym", + "dsbG" + ], + [ + "gene_synonym", + "ybdP" + ] + ], + "dna_sequence": "ATGTTAAAAAAGATACTTTTACTGGCTCTGCTTCCTGCAATCGCCTTCGCAGAGGAACTTCCTGCTCCAGTAAAAGCGATTGAAAAACAGGGCATTACAATCATCAAAACATTCGATGCCCCCGGAGGAATGAAAGGTTATCTCGGAAAGTATCAGGATATGGGCGTCACCATCTACCTGACTCCAGATGGTAAGCACGCTATCTCTGGTTACATGTACAACGAGAAAGGTGAAAACCTGAGTAACACACTTATCGAAAAAGAAATTTACGCACCAGCCGGACGCGAAATGTGGCAACGGATGGAACAATCCCACTGGCTCCTCGACGGTAAAAAAGATGCGCCGGTCATTGTCTACGTCTTCGCCGATCCGTTCTGCCCATATTGTAAACAGTTCTGGCAGCAGGCGCGCCCGTGGGTAGATTCTGGCAAAGTGCAATTAAGAACATTGTTGGTTGGGGTTATCAAGCCAGAAAGCCCGGCGACAGCAGCGGCAATTCTTGCCTCCAAAGATCCCGCAAAAACCTGGCAACAATATGAAGCCTCTGGTGGCAAGCTTAAGCTAAACGTGCCTGCAAACGTAAGTACAGAGCAAATGAAAGTGTTAAGTGACAATGAGAAACTGATGGACGATCTGGGGGCAAATGTCACGCCGGCTATCTATTACATGAGTAAGGAAAATACGCTACAACAGGCCGTGGGGTTGCCCGATCAGAAAACGCTTAATATCATTATGGGGAATAAATAA", + "dna_sequence_length": 747, + "functions": [ + "thiol:disulfide interchange protein, periplasmic" + ], + "id": "CDS_603", 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"gene_synonym", + "EcoGene:EG13539" + ], + [ + "gene_synonym", + "GI:16128596" + ], + [ + "gene_synonym", + "GeneID:946395" + ], + [ + "gene_synonym", + "JW0605" + ], + [ + "gene_synonym", + "NP_415146.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77231" + ], + [ + "gene_synonym", + "b0613" + ], + [ + "gene_synonym", + "citG" + ], + [ + "gene_synonym", + "ybdT" + ] + ], + "dna_sequence": 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"id": "CDS_611", + "location": [ + [ + "NC_000913", + 647509, + "-", + 879 + ] + ], + "md5": "b4b1057e26250b0331d35675749da33c", + "parent_gene": "", + "protein_md5": "a27ce1a7c7f7369ee4e47a9563e148fa", + "protein_translation": "MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDRINCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDMFRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQPVTPTTVCSTAASFCRGLTDRELRTNNSQLTAGQRLYQQLGLTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLLLMAINGDTNVASRGGEGGLRWLQREAQTLLQKGGIRTPADLDYLRQFDRECIERNLSPGGSADLLILTWFLAQI", + "protein_translation_length": 292, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002116" + ], + [ + "gene_synonym", + "ECK0607" + ], + [ + "gene_synonym", + "EcoGene:EG13540" + ], + [ + "gene_synonym", + "GI:16128597" + ], + [ + "gene_synonym", + "GeneID:949084" + ], + [ + "gene_synonym", + "JW0606" + ], + [ + "gene_synonym", + "NP_415147.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6G5" + ], + [ + "gene_synonym", + "b0614" + ], 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"gene_synonym", + "ECK0609" + ], + [ + "gene_synonym", + "EcoGene:EG13542" + ], + [ + "gene_synonym", + "GI:90111153" + ], + [ + "gene_synonym", + "GeneID:945406" + ], + [ + "gene_synonym", + "JW0608" + ], + [ + "gene_synonym", + "NP_415149.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9I1" + ], + [ + "gene_synonym", + "b0616" + ], + [ + "gene_synonym", + "citE" + ], + [ + "gene_synonym", + "ybdW" + ] + ], + "dna_sequence": 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"protein_translation": "MNKEEQYLLFALSAPMEILNQGCKPAHDSPKMYTGIKEFELSSSWGINNRDDLIQTIYQMTDDGHANDLAGLYLTWHRSSPEEWKALIAGGSERGLIYTQFVAQTAMCCGEGGIKAWDYVRMGFLSRVGVLNKWLTEEESLWLQSRVYVRAHHYYHSWMHYFSAYSLGRLYWQSSQCEDNTSLREALTLYKYDSAGSRMFEELAAGSDRFYATLPWQPLTVQSECPVTLKDVSDL", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002222" + ], + [ + "gene_synonym", + "ECK0642" + ], + [ + "gene_synonym", + "EcoGene:EG13652" + ], + [ + "gene_synonym", + "GI:16128632" + ], + [ + "gene_synonym", + "GeneID:945253" + ], + [ + "gene_synonym", + "JW0644" + ], + [ + "gene_synonym", + "NP_415182.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77359" + ], + [ + "gene_synonym", + "b0649" + ], + [ + "gene_synonym", + "djlC" + ], + [ + "gene_synonym", + "hscD" + ], + [ + "gene_synonym", + "ybeV" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG13653" + ], + [ + "gene_synonym", + "GI:16128633" + ], + [ + "gene_synonym", + "GeneID:945218" + ], + [ + "gene_synonym", + "JW0645" + ], + [ + "gene_synonym", + "NP_415183.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77319" + ], + [ + "gene_synonym", + "b0650" + ], + [ + "gene_synonym", + "hscC" + ], + [ + "gene_synonym", + "ybeW" + ] + ], + "dna_sequence": 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"ribonucleoside hydrolase 1" + ], + "id": "CDS_648", + "location": [ + [ + "NC_000913", + 684412, + "-", + 936 + ] + ], + "md5": "d96ee9e9cf2ba5fbe54ab75501f25c20", + "parent_gene": "", + "protein_md5": "bca159193309a168039dcaf318718843", + "protein_translation": "MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTVVDYYYLTGNKPNATVMVDVDRQGFVDLLADRLKFYA", + "protein_translation_length": 311, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002232" + ], + [ + "gene_synonym", + "ECK0645" + ], + [ + "gene_synonym", + "EcoGene:EG12663" + ], + [ + "gene_synonym", + "GI:16128635" + ], + [ + "gene_synonym", + "GeneID:945254" + ], + [ + "gene_synonym", + "JW0647" + ], + [ + "gene_synonym", + "NP_415185.1" + ], + [ + "gene_synonym", + 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"NC_000913", + 685255, + "-", + 726 + ] + ], + "md5": "57190cbdfc84107336444b3f50a28ed9", + "parent_gene": "", + "protein_md5": "38cdb0dacca0e9d5add18020d599e6ed", + "protein_translation": "MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLIKTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQVKVLKRDKAPAREKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLFDEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDSPKDAFFDDPKSDRAKDFLAKILH", + "protein_translation_length": 241, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002234" + ], + [ + "gene_synonym", + "ECK0646" + ], + [ + "gene_synonym", + "EcoGene:EG12662" + ], + [ + "gene_synonym", + "GI:16128636" + ], + [ + "gene_synonym", + "GeneID:947354" + ], + [ + "gene_synonym", + "JW0648" + ], + [ + "gene_synonym", + "NP_415186.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AER5" + ], + [ + "gene_synonym", + "b0653" + ], + [ + "gene_synonym", + "gltK" + ] + ], + "dna_sequence": 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"protein_translation": "MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA", + "protein_translation_length": 224, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002239" + ], + [ + "gene_synonym", + "ECK0647" + ], + [ + "gene_synonym", + "EcoGene:EG12661" + ], + [ + "gene_synonym", + "GI:16128637" + ], + [ + "gene_synonym", + "GeneID:945443" + ], + [ + "gene_synonym", + "JW0649" + ], + [ + "gene_synonym", + "NP_415187.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AER3" + ], + [ + "gene_synonym", + "b0654" + ], + [ + "gene_synonym", + "gltJ" + ] + ], + "dna_sequence": "ATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAACACCACCTATCTTGGTTGGATCTGGAGTGGTTTTCAGGTGACGATCGCTTTGTCGATCTGCGCCTGGATTATCGCTTTCCTCGTCGGTTCATTTTTCGGCATTTTACGTACCGTTCCAAACCGTTTTCTCTCTGGTCTGGGTACGTTGTATGTCGAACTGTTCCGCAACGTGCCGTTGATTGTGCAATTCTTTACCTGGTATCTGGTGATCCCGGAGCTGCTGCCGGAGAAAATCGGCATGTGGTTTAAGGCCGAGCTGGATCCCAATATTCAGTTTTTCCTTTCATCCATGCTCTGCCTGGGGCTGTTTACCGCCGCCCGTGTTTGCGAACAGGTACGCGCCGCGATTCAGTCGCTGCCGCGAGGGCAAAAAAATGCCGCGCTGGCGATGGGCCTGACGCTACCGCAGGCTTATCGATACGTACTGCTGCCTAATGCTTATCGCGTTATCGTCCCGCCGATGACCTCAGAGATGATGAACCTGGTGAAAAACTCCGCCATCGCCTCGACTATCGGTCTGGTGGATATGGCGGCGCAGGCGGGTAAATTGCTCGATTACTCAGCCCATGCCTGGGAGTCGTTTACCGCCATTACGCTGGCGTATGTGTTGATTAACGCTTTTATCATGCTGGTGATGACGCTGGTTGAACGTAAAGTTCGCCTGCCTGGCAACATGGGGGGCAAATAA", + "dna_sequence_length": 741, + "functions": [ + "glutamate/aspartate ABC transporter permease" + ], + "id": "CDS_651", + "location": [ + [ + "NC_000913", + 686669, + "-", + 741 + ] + ], + "md5": "036a890280cc1e10e69343518476d420", + "parent_gene": "", + 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"gene_synonym", + "UniProtKB/Swiss-Prot:P46121" + ], + [ + "gene_synonym", + "YP_001165310.1" + ], + [ + "gene_synonym", + "b4590" + ], + [ + "gene_synonym", + "ybfK" + ] + ], + "dna_sequence": "ATGCAGAAACCCTTACCAGTCAGGTGGCTGATAATACAAGGGTTAACAGAGAATGAGCACTGCGGAATACAGGCATATGCCTGTAATACAGAGAGTCAGGAAGACCTGTACGCTGAAGTGCCCTTAGTCGGTAGACTAACGGGCATTGAAGAAGTGAAAGTCGAAGCTATTGCGATGAGCAAACTTCATAATATGAGTTGTCCGCCTTATATGGGGCATAGTGCGGCTGTTATTTTCCATTTAATTTACCTTTCCTGA", + "dna_sequence_length": 258, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_681", + "location": [ + [ + "NC_000913", + 720583, + "+", + 258 + ] + ], + "md5": "55e9e7c5ebfa2c0a7dc8eb5914c2f0b9", + "parent_gene": "", + "protein_md5": "0bdd73c75df3d4518d75cc2b2f5c0de0", + "protein_translation": "MQKPLPVRWLIIQGLTENEHCGIQAYACNTESQEDLYAEVPLVGRLTGIEEVKVEAIAMSKLHNMSCPPYMGHSAAVIFHLIYLS", + "protein_translation_length": 85, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002366" + ], + [ + "gene_synonym", 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"MSGLRPALSTFIFLLLITGGVYPLLTTVLGQWWFPWQANGSLIREGDTVRGSALIGQNFTGNGYFHGRPSATAEMPYNPQASGGSNLAVSNPELDKLIAARVAALRAANPDASASVPVELVTASASGLDNNITPQAAAWQIPRVAKARNLSVEQLTQLIAKYSQQPLVKYIGQPVVNIVELNLALDKLDE", + "protein_translation_length": 190, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002376" + ], + [ + "gene_synonym", + "ECK0685" + ], + [ + "gene_synonym", + "EcoGene:EG10514" + ], + [ + "gene_synonym", + "GI:16128673" + ], + [ + "gene_synonym", + "GeneID:947450" + ], + [ + "gene_synonym", + "JW0685" + ], + [ + "gene_synonym", + "NP_415225.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P03960" + ], + [ + "gene_synonym", + "b0697" + ], + [ + "gene_synonym", + "kac" + ], + [ + "gene_synonym", + "kdpB" + ] + ], + "dna_sequence": 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"protein_translation_length": 169, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002417" + ], + [ + "gene_synonym", + "ECK0697" + ], + [ + "gene_synonym", + "EcoGene:EG10736" + ], + [ + "gene_synonym", + "GI:16128683" + ], + [ + "gene_synonym", + "GeneID:947005" + ], + [ + "gene_synonym", + "JW0698" + ], + [ + "gene_synonym", + "NP_415236.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00914" + ], + [ + "gene_synonym", + "b0708" + ], + [ + "gene_synonym", + "phr" + ], + [ + "gene_synonym", + "phrB" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG10931" + ], + [ + "gene_synonym", + "GI:16128698" + ], + [ + "gene_synonym", + "GeneID:945402" + ], + [ + "gene_synonym", + "JW0713" + ], + [ + "gene_synonym", + "NP_415251.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC41" + ], + [ + "gene_synonym", + "b0723" + ], + [ + "gene_synonym", + "sdhA" + ] + ], + "dna_sequence": 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"MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE", + "protein_translation_length": 933, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002480" + ], + [ + "gene_synonym", + "ECK0715" + ], + [ + "gene_synonym", + "EcoGene:EG10980" + ], + [ + "gene_synonym", + "GI:16128702" + ], + [ + "gene_synonym", + "GeneID:945307" + ], + [ + "gene_synonym", + "JW0716" + ], + [ + "gene_synonym", + "NP_415255.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFG6" + ], + [ + "gene_synonym", + "b0727" + ], + [ + "gene_synonym", + "sucB" + ] + ], + "dna_sequence": 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"ATGAACTTACATGAATATCAGGCAAAACAACTTTTTGCCCGCTATGGCTTACCAGCACCGGTGGGTTATGCCTGTACTACTCCGCGCGAAGCAGAAGAAGCCGCTTCAAAAATCGGTGCCGGTCCGTGGGTAGTGAAATGTCAGGTTCACGCTGGTGGCCGCGGTAAAGCGGGCGGTGTGAAAGTTGTAAACAGCAAAGAAGACATCCGTGCTTTTGCAGAAAACTGGCTGGGCAAGCGTCTGGTAACGTATCAAACAGATGCCAATGGCCAACCGGTTAACCAGATTCTGGTTGAAGCAGCGACCGATATCGCTAAAGAGCTGTATCTCGGTGCCGTTGTTGACCGTAGTTCCCGTCGTGTGGTCTTTATGGCCTCCACCGAAGGCGGCGTGGAAATCGAAAAAGTGGCGGAAGAAACTCCGCACCTGATCCATAAAGTTGCGCTTGATCCGCTGACTGGCCCGATGCCGTATCAGGGACGCGAGCTGGCGTTCAAACTGGGTCTGGAAGGTAAACTGGTTCAGCAGTTCACCAAAATCTTCATGGGCCTGGCGACCATTTTCCTGGAGCGCGACCTGGCGTTGATCGAAATCAACCCGCTGGTCATCACCAAACAGGGCGATCTGATTTGCCTCGACGGCAAACTGGGCGCTGACGGCAACGCACTGTTCCGCCAGCCTGATCTGCGCGAAATGCGTGACCAGTCGCAGGAAGATCCGCGTGAAGCACAGGCTGCACAGTGGGAACTGAACTACGTTGCGCTGGACGGTAACATCGGTTGTATGGTTAACGGCGCAGGTCTGGCGATGGGTACGATGGACATCGTTAAACTGCACGGCGGCGAACCGGCTAACTTCCTTGACGTTGGCGGCGGCGCAACCAAAGAACGTGTAACCGAAGCGTTCAAAATCATCCTCTCTGACGACAAAGTGAAAGCCGTTCTGGTTAACATCTTCGGCGGTATCGTTCGTTGCGACCTGATCGCTGACGGTATCATCGGCGCGGTAGCAGAAGTGGGTGTTAACGTACCGGTCGTGGTACGTCTGGAAGGTAACAACGCCGAACTCGGCGCGAAGAAACTGGCTGACAGCGGCCTGAATATTATTGCAGCAAAAGGTCTGACGGATGCAGCTCAGCAGGTTGTTGCCGCAGTGGAGGGGAAATAA", 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"GeneID:945314" + ], + [ + "gene_synonym", + "JW0718" + ], + [ + "gene_synonym", + "NP_415257.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGE9" + ], + [ + "gene_synonym", + "b0729" + ], + [ + "gene_synonym", + "sucD" + ] + ], + "dna_sequence": "ATGTCCATTTTAATCGATAAAAACACCAAGGTTATCTGCCAGGGCTTTACCGGTAGCCAGGGGACTTTCCACTCAGAACAGGCCATTGCATACGGCACTAAAATGGTTGGCGGCGTAACCCCAGGTAAAGGCGGCACCACCCACCTCGGCCTGCCGGTGTTCAACACCGTGCGTGAAGCCGTTGCTGCCACTGGCGCTACCGCTTCTGTTATCTACGTACCAGCACCGTTCTGCAAAGACTCCATTCTGGAAGCCATCGACGCAGGCATCAAACTGATTATCACCATCACTGAAGGCATCCCGACGCTGGATATGCTGACCGTGAAAGTGAAGCTGGATGAAGCAGGCGTTCGTATGATCGGCCCGAACTGCCCAGGCGTTATCACTCCGGGTGAATGCAAAATCGGTATCCAGCCTGGTCACATTCACAAACCGGGTAAAGTGGGTATCGTTTCCCGTTCCGGTACACTGACCTATGAAGCGGTTAAACAGACCACGGATTACGGTTTCGGTCAGTCGACCTGTGTCGGTATCGGCGGTGACCCGATCCCGGGCTCTAACTTTATCGACATTCTCGAAATGTTCGAAAAAGATCCGCAGACCGAAGCGATCGTGATGATCGGTGAGATCGGCGGTAGCGCTGAAGAAGAAGCAGCTGCGTACATCAAAGAGCACGTTACCAAGCCAGTTGTGGGTTACATCGCTGGTGTGACTGCGCCGAAAGGCAAACGTATGGGCCACGCGGGTGCCATCATTGCCGGTGGGAAAGGGACTGCGGATGAGAAATTCGCTGCTCTGGAAGCCGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAA", + "dna_sequence_length": 870, + "functions": [ + "succinyl-CoA synthetase, NAD(P)-binding, alpha subunit" + ], + "id": "CDS_717", + "location": [ + [ + "NC_000913", + 764180, + "+", + 870 + ] + ], + "md5": "e0c4443ded091533b5070861b0c0882a", + "parent_gene": "", + "protein_md5": "952a12588809478949035bbbb8605308", + "protein_translation": "MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK", + "protein_translation_length": 289, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002487" + ], + [ + "gene_synonym", + "ECK0718" + ], + [ + "gene_synonym", + "EcoGene:EG11109" + ], + [ + "gene_synonym", + "GI:16128705" + ], + [ + "gene_synonym", + "GeneID:945371" + ], + [ + "gene_synonym", + "JW0719" + ], + [ + "gene_synonym", + "NP_415258.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13669" + ], + [ + "gene_synonym", + "b0730" + ], + [ + "gene_synonym", + "farR" + ], + [ + "gene_synonym", + "mngR" + ], + [ + "gene_synonym", + "ybgB" + ] + ], + "dna_sequence": "ATGGGACACAAGCCCTTATACCGGCAGATTGCCGATCGCATTCGTGAACAAATTGCGCGTGGCGAGCTTAAACCTGGCGATGCGTTACCCACTGAATCAGCGCTACAAACAGAGTTTGGCGTCAGCCGGGTTACGGTGCGTCAGGCTTTGCGCCAGCTAGTCGAGCAGCAGATCCTCGAAAGCATTCAGGGCAGCGGGACTTACGTCAAAGAAGAGCGGGTCAATTACGATATTTTTCAGTTAACCAGTTTTGATGAAAAACTGTCGGACCGTCACGTCGATACACACAGTGAAGTTCTGATATTCGAAGTGATTCCGGCTGACGATTTTCTTCAGCAACAGCTACAAATCACCCCGCAGGATCGTGTGTGGCATGTGAAGCGCGTGCGCTATCGCAAGCAAAAGCCAATGGCGCTGGAAGAAACCTGGATGCCGCTTGCGTTGTTCCCGGATCTCACCTGGCAGGTCATGGAAAATTCGAAATATCACTTTATCGAAGAAGTGAAGAAAATGGTTATCGATCGTAGCGAACAGGAAATCATTCCTCTGATGCCAACCGAAGAGATGAGCCGTCTGCTTAATATCAGCCAGACAAAGCCGATTCTTGAAAAAGTATCGCGTGGATATTTAGTTGATGGTCGGGTGTTTGAATATAGCCGCAACGCTTTTAATACCGATGACTATAAATTTACCCTGATAGCGCAGCGAAAATCATCGCGATAA", + "dna_sequence_length": 723, + "functions": [ + "transcriptional repressor for the mannosyl-D-glycerate catabolic operon" + ], + "id": "CDS_718", + "location": [ + [ + "NC_000913", + 765875, + "-", + 723 + ] + ], + "md5": "6576c743d62157eefdbb2885ce2e0b4d", + "parent_gene": "", + "protein_md5": "ba79ccaf2c42986b22377382b12c8017", + "protein_translation": "MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIFEVIPADDFLQQQLQITPQDRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENSKYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEYSRNAFNTDDYKFTLIAQRKSSR", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002493" + ], + [ + "gene_synonym", + "ECK0719" + ], + [ + "gene_synonym", + "EcoGene:EG13235" + ], + [ + "gene_synonym", + "GI:16128706" + ], + [ + "gene_synonym", + "GeneID:945355" + ], + [ + "gene_synonym", + "JW0720" + ], + [ + "gene_synonym", + "NP_415259.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P54745" + ], + [ + "gene_synonym", + "b0731" + ], + [ + "gene_synonym", + "hrsA" + ], + [ + "gene_synonym", + "mngA" + ] 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"ybgR" + ], + [ + "gene_synonym", + "zitB" + ] + ], + "dna_sequence": 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"aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002560" + ], + [ + "gene_synonym", + "ECK0743" + ], + [ + "gene_synonym", + "EcoGene:EG10079" + ], + [ + "gene_synonym", + "GI:16128722" + ], + [ + "gene_synonym", + "GeneID:945605" + ], + [ + "gene_synonym", + "JW0737" + ], + [ + "gene_synonym", + "NP_415275.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB91" + ], + [ + "gene_synonym", + "aroG" + ], + [ + "gene_synonym", + "b0754" + ] + ], + "dna_sequence": 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"protein_md5": "b44f939266db7350d7326798f5f7f138", + "protein_translation": "MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDENFKPLKRYYLGNADEIAAKAAAVANQGKAK", + "protein_translation_length": 250, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002566" + ], + [ + "gene_synonym", + "ECK0745" + ], + [ + "gene_synonym", + "EcoGene:EG11698" + ], + [ + "gene_synonym", + "GI:16128724" + ], + [ + "gene_synonym", + "GeneID:944943" + ], + [ + "gene_synonym", + "JW0739" + ], + [ + "gene_synonym", + "NP_415277.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9C3" + ], + [ + "gene_synonym", + "b0756" + ], + [ + "gene_synonym", + "galM" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW0741" + ], + [ + "gene_synonym", + "NP_415279.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09148" + ], + [ + "gene_synonym", + "b0758" + ], + [ + "gene_synonym", + "galB" + ], + [ + "gene_synonym", + "galT" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_415289.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52696" + ], + [ + "gene_synonym", + "b0768" + ], + [ + "gene_synonym", + "ybhD" + ] + ], + "dna_sequence": "ATGAAGCATGAATTATCAAGTATGAAGGCATTTGTCATACTGGCAGAGTCCAGTTCGTTTAACAATGCCGCTAAATTACTCAATATTACGCAACCTGCATTAACGCGAAGAATAAAAAAGATGGAGGAAGATTTACATGTTCAACTATTTGAGCGTACAACTCGCAAGGTTACGTTAACAAAAGCAGGAAAAAGGTTGCTCCCGGAGGCGCGGGAATTAATAAAGAAATTCGATGAAACGCTTTTTAATATTCGTGATATGAATGCTTATCATCGTGGTATGGTGACGTTAGCGTGTATTCCGACCGCAGTATTTTATTTTTTACCGCTGGCAATCGGTAAATTTAATGAGCTGTATCCCAATATTAAAGTGCGGATTCTGGAACAAGGCACGAATAATTGCATGGAATCGGTGCTGTGTAACGAATCAGACTTTGGCATAAACATGAACAACGTCACAAATTCATCCATTGATTTTACCCCACTGGTCAACGAGCCGTTCGTGCTGGCCTGTCGGCGTGACCATCCATTGGCCAAAAAGCAGCTTGTAGAATGGCAGGAGTTAGTGGGTTACAAAATGATTGGCGTACGCTCCTCCAGCGGCAACCGACTGTTGATAGAACAACAGCTGGCCGACAAGCCCTGGAAGCTGGACTGGTTTTACGAAGTGCGTCATCTTTCGACGTCATTAGGACTGGTGGAGGCGGGACTGGGGATTTCGGCGCTTCCTGGCCTGGCAATGCCTCATGCGCCCTATTCTTCGATTATTGGTATCCCATTGGTGGAACCCGTTATACGTCGAACATTGGGAATAATTCGCCGTAAAGATGCCGTACTTTCTCCAGCAGCAGAACGCTTTTTTGCCTTGCTGATTAATTTATGGACTGACGATAAAGACAATTTGTGGACCAATATCGTCGAACGCCAGAGACACGCGTTACAGGAGATAGGTTAA", + "dna_sequence_length": 954, + "functions": [ + "putative DNA-binding transcriptional regulator" + ], + "id": "CDS_750", + "location": [ + [ + "NC_000913", + 800575, + "-", + 954 + ] + ], + "md5": "daf6b3c9e038e425ac5d5bbe5de89176", + "parent_gene": "", + "protein_md5": "77bbcd0dc6af560cf8a35370040d69ac", + "protein_translation": "MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHVQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002618" + ], + [ + "gene_synonym", + "ECK0758" + ], + [ + "gene_synonym", + "EcoGene:EG13664" + ], + [ + "gene_synonym", + "GI:16128737" + ], + [ + "gene_synonym", + "GeneID:945375" + ], + [ + "gene_synonym", + "JW0752" + ], + [ + "gene_synonym", + "NP_415290.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAV8" + ], + [ + "gene_synonym", + "b0769" + ], + [ + "gene_synonym", + "ybhH" + ] + ], + "dna_sequence": "ATGAAAAAAATACCCTGCGTGATGATGCGAGGTGGAACCTCGAGGGGCGCGTTCCTGTTAGCGGAACATTTACCCGAAGATCAAACGCAGCGCGATAAAATATTGATGGCAATTATGGGTTCCGGTAACGATCTGGAAATTGACGGTATTGGCGGCGGTAATCCACTGACCAGTAAAGTCGCCATTATTAGCCGTTCCAGCGATCCGCGTGCTGATGTCGATTATCTGTTTGCGCAGGTAATCGTTCATGAGCAACGTGTCGATACCACGCCTAACTGCGGCAATATGCTGTCTGGTGTTGGGGCATTCGCCATTGAAAATGGTTTGATTGCAGCGACTTCGCCAGTTACTCGCGTACGTATCCGCAACGTCAATACGGGTACGTTCATCGAAGCTGATGTGCAAACGCCAAATGGTGTTGTCGAGTACGAGGGTAGCGCCAGAATTGACGGCGTACCGGGTACTGCCGCACCGGTTGCGCTCACTTTCCTGAATGCCGCTGGAACCAAAACCGGAAAAGTTTTCCCGACTGATAATCAGATTGATTATTTTGACGATGTCCCGGTGACCTGTATCGATATGGCGATGCCAGTCGTCATTATTCCGGCTGAATATCTGGGAAAAACAGGTTATGAATTACCGGCGGAACTGGATGCCGACAAAGCATTATTAGCCCGCATTGAATCTATCCGTCTACAAGCGGGTAAAGCAATGGGCTTAGGTGATGTCAGTAATATGGTTATCCCTAAACCTGTGCTTATTTCTCCAGCGCAGAAAGGCGGGGCAATTAATGTGCGTTATTTTATGCCGCATTCTTGCCATCGCGCGCTGGCGATAACCGGTGCTATTGCTATTTCCAGTAGTTGTGCATTGGAAGGCACCGTCACCCGACAAATCGTCCCTTCTGTAGGATACGGCAATATCAATATTGAACACCCCAGTGGTGCGCTCGACGTTCATTTAAGTAATGAAGGTCAGGATGCCACGACGTTACGCGCATCTGTTATTCGGACGACCAGAAAAATATTTTCCGGTGAAGTTTATCTTCCCTGA", 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"JW0753" + ], + [ + "gene_synonym", + "NP_415291.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75763" + ], + [ + "gene_synonym", + "b0770" + ], + [ + "gene_synonym", + "ybhI" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "EcoGene:EG13666" + ], + [ + "gene_synonym", + "GI:90111167" + ], + [ + "gene_synonym", + "GeneID:945380" + ], + [ + "gene_synonym", + "JW5103" + ], + [ + "gene_synonym", + "NP_415292.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75764" + ], + [ + "gene_synonym", + "b0771" + ], + [ + "gene_synonym", + "ybhJ" + ] + ], + "dna_sequence": 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"MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVSRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM", + "protein_translation_length": 753, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002629" + ], + [ + "gene_synonym", + "ECK0761" + ], + [ + "gene_synonym", + "EcoGene:EG12875" + ], + [ + "gene_synonym", + "GI:16128740" + ], + [ + "gene_synonym", + "GeneID:945381" + ], + [ + "gene_synonym", + "JW0755" + ], + [ + "gene_synonym", + "NP_415293.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46130" + ], + [ + "gene_synonym", + "b0772" + ], + [ + "gene_synonym", + "ybhC" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16128743" + ], + [ + "gene_synonym", + "GeneID:945370" + ], + [ + "gene_synonym", + "JW0758" + ], + [ + "gene_synonym", + "NP_415296.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P12996" + ], + [ + "gene_synonym", + "b0775" + ], + [ + "gene_synonym", + "bioB" + ] + ], + "dna_sequence": 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"GeneID:945388" + ], + [ + "gene_synonym", + "JW0760" + ], + [ + "gene_synonym", + "NP_415298.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P12999" + ], + [ + "gene_synonym", + "b0777" + ], + [ + "gene_synonym", + "bioC" + ] + ], + "dna_sequence": 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"MSKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQVIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL", + "protein_translation_length": 225, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002658" + ], + [ + "gene_synonym", + "ECK0768" + ], + [ + "gene_synonym", + "EcoGene:EG11062" + ], + [ + "gene_synonym", + "GI:16128747" + ], + [ + "gene_synonym", + "GeneID:945385" + ], + [ + "gene_synonym", + "JW0762" + ], + [ + "gene_synonym", + "NP_415300.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8F8" + ], + [ + "gene_synonym", + "b0779" + ], + [ + "gene_synonym", + "dar-1" + ], + [ + "gene_synonym", + "dar-6" + ], + [ + "gene_synonym", + "uvrB" + ] + ], + "dna_sequence": 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transferase" + ], + "id": "CDS_762", + "location": [ + [ + "NC_000913", + 816647, + "-", + 909 + ] + ], + "md5": "1139488a0cf4f67633bfac3b38859499", + "parent_gene": "", + "protein_md5": "1ecffde042eb451537578d672b06669e", + "protein_translation": "MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002669" + ], + [ + "gene_synonym", + "ECK0770" + ], + [ + "gene_synonym", + "EcoGene:EG11595" + ], + [ + "gene_synonym", + "GI:16128749" + ], + [ + "gene_synonym", + "GeneID:945392" + ], + [ + "gene_synonym", + "JW0764" + ], + [ + "gene_synonym", + "NP_415302.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30745" + ], + [ + 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"gene_synonym", + "NP_415303.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEZ9" + ], + [ + "gene_synonym", + "b0782" + ], + [ + "gene_synonym", + "moaB" + ] + ], + "dna_sequence": "ATGAGTCAGGTAAGCACTGAATTTATCCCGACCCGTATTGCTATTCTTACGGTTTCTAATCGTCGCGGTGAAGAAGACGATACCTCCGGTCACTATCTGCGCGATTCGGCGCAAGAAGCGGGCCATCACGTTGTCGATAAAGCCATTGTGAAAGAAAACCGCTACGCTATTCGCGCTCAGGTATCTGCGTGGATCGCCAGCGACGATGTACAAGTGGTATTGATTACGGGTGGTACTGGCCTGACGGAAGGTGATCAGGCTCCCGAAGCATTGCTGCCGTTGTTCGACCGTGAAGTTGAAGGTTTTGGTGAAGTGTTCCGGATGTTGTCGTTTGAAGAGATTGGCACTTCCACGTTGCAATCTCGTGCGGTAGCGGGCGTCGCCAACAAAACGCTGATTTTCGCCATGCCGGGTTCGACCAAAGCGTGCCGTACCGCATGGGAAAATATCATCGCGCCGCAGCTGGATGCCCGTACGCGTCCGTGTAATTTCCATCCACATTTGAAGAAATAA", + "dna_sequence_length": 513, + "functions": [ + "inactive molybdopterin adenylyltransferase" + ], + "id": "CDS_764", + "location": [ + [ + "NC_000913", + 818055, + "+", + 513 + ] + ], + "md5": "04a8b9f0f42648cfe5e069e37f10b241", + "parent_gene": "", + "protein_md5": 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"gene_synonym", + "UniProtKB/Swiss-Prot:P0AA84" + ], + [ + "gene_synonym", + "b0789" + ], + [ + "gene_synonym", + "clsB" + ], + [ + "gene_synonym", + "ybhO" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:945408" + ], + [ + "gene_synonym", + "JW0773" + ], + [ + "gene_synonym", + "NP_415311.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAW1" + ], + [ + "gene_synonym", + "b0790" + ], + [ + "gene_synonym", + "ybhP" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK0781" + ], + [ + "gene_synonym", + "EcoGene:EG13674" + ], + [ + "gene_synonym", + "GI:16128760" + ], + [ + "gene_synonym", + "GeneID:945403" + ], + [ + "gene_synonym", + "JW5803" + ], + [ + "gene_synonym", + "NP_415313.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFP9" + ], + [ + "gene_synonym", + "b0792" + ], + [ + "gene_synonym", + "ybhR" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW0777" + ], + [ + "gene_synonym", + "NP_415314.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFQ2" + ], + [ + "gene_synonym", + "b0793" + ], + [ + "gene_synonym", + "ybhS" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "JW5104" + ], + [ + "gene_synonym", + "NP_415315.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9U1" + ], + [ + "gene_synonym", + "b0794" + ], + [ + "gene_synonym", + "ybhF" + ] + ], + "dna_sequence": 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family putative transcriptional regulator" + ], + "id": "CDS_778", + "location": [ + [ + "NC_000913", + 830643, + "-", + 672 + ] + ], + "md5": "cc1645f054bbb7402ed2f4b6f4234fcf", + "parent_gene": "", + "protein_md5": "fbb94e456cf917e10ede5ffbb32bf5dd", + "protein_translation": "MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQNIAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRACRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDANDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGLSQRSL", + "protein_translation_length": 223, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002719" + ], + [ + "gene_synonym", + "ECK0786" + ], + [ + "gene_synonym", + "EcoGene:EG11235" + ], + [ + "gene_synonym", + "GI:16128765" + ], + [ + "gene_synonym", + "GeneID:945425" + ], + [ + "gene_synonym", + "JW0781" + ], + [ + "gene_synonym", + "NP_415318.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25888" + ], + [ + "gene_synonym", + "b0797" + ], + [ + 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"gene_synonym", + "GI:16128766" + ], + [ + "gene_synonym", + "GeneID:945426" + ], + [ + "gene_synonym", + "JW0783" + ], + [ + "gene_synonym", + "NP_415319.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30176" + ], + [ + "gene_synonym", + "b0798" + ], + [ + "gene_synonym", + "ybiA" + ] + ], + "dna_sequence": "ATGCCCGTTCGAGCACAAAGGATCCAACACGTCATGCAAGACACCATCATAAATTTCTACAGCACCAGCGATGACTACGGTGATTTTTCTAACTTTGCCGCCTGGCCCATCAAGGTTGACGGGAAAACCTGGCCTACCTCAGAACACTATTTTCAGGCACAAAAATTCCTTGATGAAAAATACCGCGAAGAGATCCGTCGGGTTTCTTCCCCTATGGTCGCCGCACGCATGGGGCGCGATCGTTCTAAGCCTCTGCGTAAAAACTGGGAGTCGGTCAAAGAACAGGTGATGCGAAAAGCACTTCGCGCTAAATTCGAACAGCATGCAGAACTGCGTGCGCTCTTGCTGGCAACCGCGCCCGCAAAACTGGTTGAGCATACGGAAAACGATGCTTACTGGGGAGACGGTGGTCATGGTAAGGGCAAGAATCGACTGGGCTACCTTTTAATGGAGTTGCGCGAACAATTGGCTATAGAGAAGTAA", + "dna_sequence_length": 483, + "functions": [ + "DUF1768 family protein" + ], + "id": "CDS_780", + "location": [ + [ + "NC_000913", + 832950, + "-", + 483 + ] + ], + "md5": 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"MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKMGGFNLKYRYEEDNSPLGVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASIYGVVGVGYGKFQTTEYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDVGTWIAGVGYRF", + "protein_translation_length": 171, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002786" + ], + [ + "gene_synonym", + "ECK0804" + ], + [ + "gene_synonym", + "EcoGene:EG13321" + ], + [ + "gene_synonym", + "GI:16128783" + ], + [ + "gene_synonym", + "GeneID:945360" + ], + [ + "gene_synonym", + "JW0800" + ], + [ + "gene_synonym", + "NP_415336.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75785" + ], + [ + "gene_synonym", + "b0815" + ], + [ + "gene_synonym", + "opgE" + ], + [ + "gene_synonym", + "ybiP" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW0803" + ], + [ + "gene_synonym", + "NP_415340.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAX8" + ], + [ + "gene_synonym", + "b0819" + ], + [ + "gene_synonym", + "ldtB" + ], + [ + "gene_synonym", + "ybiS" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK0811" + ], + [ + "gene_synonym", + "EcoGene:EG13326" + ], + [ + "gene_synonym", + "GI:16128789" + ], + [ + "gene_synonym", + "GeneID:945439" + ], + [ + "gene_synonym", + "JW0805" + ], + [ + "gene_synonym", + "NP_415342.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75791" + ], + [ + "gene_synonym", + "b0821" + ], + [ + "gene_synonym", + "ybiU" + ] + ], + "dna_sequence": 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"gene_synonym", + "UniProtKB/Swiss-Prot:P75796" + ], + [ + "gene_synonym", + "b0829" + ], + [ + "gene_synonym", + "gsiA" + ], + [ + "gene_synonym", + "yliA" + ] + ], + "dna_sequence": 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"CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002832" + ], + [ + "gene_synonym", + "ECK0820" + ], + [ + "gene_synonym", + "EcoGene:EG13473" + ], + [ + "gene_synonym", + "GI:16128798" + ], + [ + "gene_synonym", + "GeneID:945459" + ], + [ + "gene_synonym", + "JW5111" + ], + [ + "gene_synonym", + "NP_415351.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75797" + ], + [ + "gene_synonym", + "b0830" + ], + [ + "gene_synonym", + "gsiB" + ], + [ + "gene_synonym", + "yliB" + ] + ], + "dna_sequence": "ATGGCAAGAGCTGTACACCGTAGTGGGTTAGTGGCGCTGGGCATTGCGACAGCGTTGATGGCATCTTGTGCATTCGCTGCCAAAGATGTGGTGGTGGCGGTAGGATCGAATTTCACCACGCTCGATCCGTATGACGCAAATGACACGTTATCTCAGGCCGTAGCGAAATCGTTTTACCAGGGGCTGTTCGGTCTGGATAAAGAGATGAAACTGAAAAACGTGCTGGCGGAGAGTTATACCGTTTCCGATGACGGCATTACTTACACCGTGAAATTGCGGGAAGGCATTAAATTCCAGGATGGCACCGATTTCAACGCCGCGGCGGTGAAAGCGAATCTGGACCGGGCCAGCGATCCGGCGAATCATCTTAAACGCTATAACCTGTATAAGAATATTGCTAAAACGGAAGCGATCGATCCGACAACGGTAAAGATTACCCTCAAACAGCCGTTCTCAGCGTTTATTAATATTCTTGCCCATCCGGCGACCGCGATGATTTCACCGGCAGCGCTGGAAAAATATGGCAAGGAGATTGGTTTTTATCCGGTGGGAACCGGACCGTATGAACTGGATACCTGGAATCAGACCGATTTTGTGAAGGTGAAAAAATTCGCGGGTTACTGGCAGCCAGGATTGCCCAAACTGGACAGCATAACCTGGCGTCCGGTGGCGGATAACAACACCCGCGCGGCAATGCTGCAAACCGGTGAAGCGCAGTTTGCTTTCCCCATTCCTTACGAGCAGGCCACACTGCTGGAGAAAAACAAAAATATCGAGTTGATGGCCAGTCCGTCAATTATGCAGCGTTATATCAGTATGAACGTGACGCAAAAGCCGTTCGATAACCCGAAGGTCCGTGAGGCGCTGAATTACGCCATTAACCGTCCGGCGCTGGTGAAAGTTGCCTTTGCGGGCTATGCAACGCCAGCTACTGGTGTGGTACCGCCAAGTATCGCCTACGCGCAAAGTTATAAACCGTGGCCTTACGATCCAGTGAAAGCGCGCGAATTACTGAAAGAGGCGGGATATCCCAACGGTTTCAGTACCACGCTGTGGTCGTCACATAACCACAGCACCGCGCAGAAAGTGCTGCAATTTACCCAGCAGCAGTTAGCGCAGGTCGGGATTAAAGCCCAGGTGACTGCGATGGATGCCGGACAGCGGGCGGCAGAAGTTGAAGGTAAAGGGCAAAAAGAGAGCGGCGTGCGGATGTTCTACACTGGCTGGTCGGCTTCAACCGGCGAAGCGGACTGGGCACTATCGCCGCTGTTTGCCTCGCAGAACTGGCCACCGACGCTGTTTAATACCGCGTTTTACAGCAATAAACAGGTGGATGACTTCCTGGCTCAGGCACTGAAAACTAATGATCCGGCGGAAAAGACCCGCTTATATAAGGCGGCGCAGGATATCATCTGGCAAGAATCGCCGTGGATCCCGCTGGTGGTAGAAAAACTGGTGTCGGCACACAGTAAAAACCTGACCGGTTTTTGGATCATGCCAGACACCGGCTTCAGCTTTGAAGACGCGGATTTGCAATAA", + "dna_sequence_length": 1539, + "functions": [ + "glutathione ABC transporter periplasmic binding protein" + ], + "id": "CDS_812", + "location": [ + [ + "NC_000913", + 869411, + "+", + 1539 + ] + ], + "md5": "98574d6028c3baf630881a35d9e99c30", + "parent_gene": "", + "protein_md5": "15e6565cfd76f124386d3ae2744c50dd", + "protein_translation": "MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGTDFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAHPATAMISPAALEKYGKEIGFYPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSITWRPVADNNTRAAMLQTGEAQFAFPIPYEQATLLEKNKNIELMASPSIMQRYISMNVTQKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKARELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEVEGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFEDADLQ", + "protein_translation_length": 512, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002834" + ], + [ + "gene_synonym", + "ECK0821" + ], + [ + "gene_synonym", + "EcoGene:EG13474" + ], + [ + "gene_synonym", + "GI:16128799" + ], + [ + "gene_synonym", + "GeneID:945460" + ], + [ + "gene_synonym", + "JW0815" + ], + [ + "gene_synonym", + "NP_415352.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75798" + ], + [ + "gene_synonym", + "b0831" + ], + [ + "gene_synonym", + "gsiC" + ], + [ + "gene_synonym", + "yliC" + ] + ], + "dna_sequence": "ATGCTTAATTACGTTATCAAACGCTTACTGGGGTTGATTCCGACGCTGTTTATCGTCTCGGTGCTGGTGTTTTTATTTGTCCATATGCTGCCCGGCGATCCGGCGCGATTGATTGCCGGGCCCGAAGCTGATGCGCAGGTTATAGAACTGGTGCGTCAGCAGCTGGGGTTGGATCAGCCGCTGTATCACCAGTTCTGGCACTATATCAGCAATGCTGTGCAGGGGGATTTTGGCCTGTCGATGGTGTCGCGTCGTCCGGTTGCCGATGAGATTGCCAGCCGCTTTATGCCAACGCTGTGGCTGACCATAACCAGTATGGTCTGGGCGGTTATATTTGGTATGGCGGCGGGAATTATCGCCGCCGTCTGGCGTAACCGTTGGCCGGATCGATTGAGTATGACCATTGCGGTGTCGGGGATCTCGTTTCCGGCATTTGCTCTGGGGATGCTTTTAATTCAGGTATTCTCCGTTGAACTGGGCTGGCTGCCTACCGTGGGAGCAGACAGTTGGCAGCACTACATTTTACCCTCCCTGACGCTCGGCGCGGCAGTGGCCGCCGTGATGGCGCGCTTTACCCGCGCGTCGTTTGTCGATGTTTTAAGCGAAGATTATATGCGTACCGCGAGGGCGAAAGGGGTGAGCGAAACCTGGGTTGTCCTCAAACACGGGCTACGTAACGCGATGATCCCGGTAGTGACCATGATGGGCTTACAGTTTGGCTTTTTGCTCGGTGGTTCCATCGTTGTGGAGAAAGTTTTCAACTGGCCGGGACTTGGACGCTTACTCGTTGACTCCGTAGAAATGCGTGATTACCCGGTGATTCAGGCGGAAATTCTGCTTTTCTCGCTGGAATTTATTCTTATCAACTTAGTGGTGGATGTGCTTTACGCCGCCATTAACCCGGCTATCAGGTACAAGTAA", + "dna_sequence_length": 921, + "functions": [ + "glutathione ABC transporter permease" + ], + "id": "CDS_813", + "location": [ + [ + "NC_000913", + 870967, + "+", + 921 + ] + ], + "md5": "d65f0b0a9a03744b71dcc28ebf60d53d", + "parent_gene": "", + "protein_md5": "c46426c216e7cf06b47dab106a168a78", + "protein_translation": "MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEADAQVIELVRQQLGLDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLTITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELGWLPTVGADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLFSLEFILINLVVDVLYAAINPAIRYK", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002836" + ], + [ + "gene_synonym", + "ECK0822" + ], + [ + "gene_synonym", + "EcoGene:EG13475" + ], + [ + "gene_synonym", + "GI:16128800" + ], + [ + "gene_synonym", + "GeneID:945461" + ], + [ + "gene_synonym", + "JW0816" + ], + [ + "gene_synonym", + "NP_415353.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75799" + ], + [ + "gene_synonym", + "b0832" + ], + [ + "gene_synonym", + "gsiD" + ], + [ + "gene_synonym", + "yliD" + ] + ], + "dna_sequence": "ATGCGACTATTTAACTGGCGACGTCAGGCGGTGTTAAACGCCATGCCACTGGTCAAACCTGACCAGGTACGTACACCGTGGCATGAATTCTGGCGACGATTTCGCCGTCAGCATATGGCGATGACCGCCGCATTATTCGTTATTTTATTGATTGTGGTGGCCATTTTTGCACGCTGGATCGCTCCCTATGACGCCGAAAATTATTTTGATTATGACAATCTGAATAACGGACCTTCTTTGCAGCACTGGTTTGGCGTCGATTCACTGGGGCGTGACATTTTCAGCCGTGTCCTGGTTGGTGCGCAAATCTCGCTGGCGGCGGGCGTGTTTGCCGTGTTTATCGGTGCGGCGATCGGGACGTTGCTGGGCTTGCTCGCTGGATATTATGAAGGCTGGTGGGATCGGCTGATCATGCGCATTTGCGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGTTTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGTTTTTCACCATGCGCATTGGTACCTCGATTATCTCTGCCGCCAGCCTCTCATTTCTCGGCCTCGGTGCGCAGCCGCCGACACCAGAGTGGGGAGCAATGCTCAATGAGGCTCGAGCGGATATGGTTATCGCGCCGCATGTCGCTGTTTTTCCGGCCCTGGCTATTTTTCTGACCGTACTGGCGTTCAATTTGTTGGGCGATGGTTTACGCGATGCGCTGGATCCGAAAATTAAAGGATAG", + "dna_sequence_length": 912, + "functions": [ + "glutathione ABC transporter permease" + ], + "id": "CDS_814", + "location": [ + [ + "NC_000913", + 871890, + "+", + 912 + ] + ], + "md5": "dac970ee889cbc3ec52c07cc8361c711", + "parent_gene": "", + "protein_md5": "235a1842601e3ba0e8f9ca8893f2ddbe", + "protein_translation": "MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAALFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVLGSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTVLLRHILPGTVSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPALAIFLTVLAFNLLGDGLRDALDPKIKG", + "protein_translation_length": 303, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002839" + ], + [ + "gene_synonym", + "ECK0823" + ], + [ + "gene_synonym", + "EcoGene:EG13476" + ], + [ + "gene_synonym", + "GI:16128801" + ], + [ + "gene_synonym", + "GeneID:945462" + ], + [ + "gene_synonym", + "JW0817" + ], + [ + "gene_synonym", + "NP_415354.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75800" + ], + [ + "gene_synonym", + "b0833" + ], + [ + "gene_synonym", + "yliE" + ] + ], + "dna_sequence": "ATGCTGAGTTTATACGAAAAGATAAAGATAAGGCTGATAATTTTATTTTTATTGGCAGCACTGTCATTTATTGGTCTTTTTTTCATCATTAACTATCAACTGGTATCGGAGCGCGCGGTAAAACGTGCCGATAGCCGCTTTGAACTTATTCAGAAAAACGTTGGCTATTTCTTTAAAGATATTGAACGTTCGGCCCTGACATTAAAGGACTCACTGTATTTATTAAAAAATACAGAGGAGATTCAACGCGCCGTGATTCTTAAAATGGAAATGATGCCATTTTTAGACTCGGTGGGACTGGTACTTGATGATAATAAATATTATCTTTTTTCGCGGAGGGCGAATGATAAAATCGTTGTTTATCATCAGGAACAAGTAAATGGACCGCTTGTCGACGAGTCAGGGCGGGTTATTTTTGCCGATTTTAACCCATCGAAACGACCGTGGTCGGTGGCTTCAGATGACTCTAACAACAGCTGGAATCCGGCATACAATTGCTTTGATCGTCCGGGTAAAAAATGTATCTCTTTTACGCTACACATCAACGGCAAAGATCACGATTTGTTAGCGGTGGATAAAATTCATGTCGATTTAAACTGGCGATATCTGAACGAGTATCTTGATCAAATCAGCGCTAATGATGAAGTTCTATTTTTGAAACAAGGCCATGAGATCATTGCCAAGAATCAACTCGCTCGTGAAAAACTGATTATTTATAATAGCGAAGGTAATTATAATATTATTGATTCTGTCGATACTGAATATATCGAAAAAACATCAGCGGTGCCAAACAACGCATTATTCGAAATCTATTTTTATTATCCTGGCGGTAATTTATTGAACGCATCAGATAAACTTTTTTATCTGCCGTTTGCGTTCATTATTATCGTATTGCTGGTGGTTTATTTAATGACCACTCGTGTGTTCCGTCGGCAATTTTCTGAAATGACAGAGCTGGTTAATACGCTGGCGTTTTTGCCTGACTCAACGGATCAAATCGAGGCTCTGAAAATTCGTGAAGGCGATGCGAAAGAGATTATCAGCATCAAAAATTCGATCGCGGAAATGAAAGATGCCGAAATTGAACGGTCAAATAAATTGCTCTCACTGATCTCTTACGATCAGGAAAGTGGTTTTATTAAAAATATGGCGATTATTGAGTCTAACAATAATCAGTATCTGGCTGTGGGGATCATCAAACTGTGTGGTCTGGAAGCCGTGGAAGCGGTGTTTGGTGTTGATGAGCGCAATAAAATCGTCAGGAAATTGTGTCAGCGAATTGCCGAGAAATATGCGCAATGCTGCGATATCGTGACATTCAATGCCGATCTCTATTTACTTCTGTGTCGGGAAAATGTACAGACATTTACCCGTAAAATAGCGATGGTAAACGATTTTGACAGCAGCTTTGGCTACCGCAATCTGCGCATCCATAAGTCTGCCATTTGTGAACCTTTGCAGGGGGAAAACGCCTGGAGTTACGCAGAAAAACTGAAACTGGCGATTTCCAGTATCCGTGACCATATGTTCTCAGAGTTTATTTTCTGTGATGACGCGAAACTCAACGAAATAGAAGAGAATATCTGGATTGCGCGTAATATTCGCCATGCAATGGAAATTGGCGAACTATTCCTCGTCTATCAACCGATCGTTGATATTAACACCCGCGCCATTCTGGGCGCGGAGGCGTTGTGCCGTTGGGTGTCTGCGGAGCGGGGGATCATTTCACCGCTGAAGTTCATTACCATTGCTGAAGATATCGGGTTTATCAATGAGCTGGGTTATCAGATTATTAAAACGGCAATGGGTGAATTCAGACATTTTAGTCAGCGTGCGTCGCTGAAGGATGATTTCTTACTGCATATTAATGTTTCGCCCTGGCAGTTAAACGAACCACACTTTCATGAGCGTTTTACCACCATCATGAAAGAAAATGGCCTGAAGGCGAACAGCCTCTGTGTTGAGATCACTGAAACCGTGATCGAGCGAATTAATGAACATTTTTATCTCAATATTGAACAACTGCGTAAACAAGGGGTACGGATATCGATTGATGACTTTGGCACCGGTTTGTCAAACCTGAAACGTTTTTATGAAATTAATCCAGACAGCATAAAGGTGGACTCGCAATTCACCGGCGATATTTTCGGTACTGCGGGAAAAATTGTGCGCATTATTTTCGACCTGGCACGCTATAACCGGATCCCGGTGATTGCGGAAGGCGTAGAGAGCGAAGACGTTGCGCGCGAATTAATCAAATTAGGATGTGTTCAGGCTCAGGGGTATCTGTACCAGAAACCCATGCCATTCTCCGCCTGGGATAAAAGTGGAAAATTAGTAAAAGAGTAG", + "dna_sequence_length": 2349, + "functions": [ + "putative membrane-anchored cyclic-di-GMP phosphodiesterase" + ], + "id": "CDS_815", + "location": [ + [ + "NC_000913", + 872979, + "+", + 2349 + ] + ], + "md5": "00e2c8de7d0fa4f6051c9cf6ae3fd025", + "parent_gene": "", + "protein_md5": "7459e01a0804156fd16dc4fece0d625a", + "protein_translation": "MLSLYEKIKIRLIILFLLAALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKDIERSALTLKDSLYLLKNTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDESGRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLHINGKDHDLLAVDKIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDSVDTEYIEKTSAVPNNALFEIYFYYPGGNLLNASDKLFYLPFAFIIIVLLVVYLMTTRVFRRQFSEMTELVNTLAFLPDSTDQIEALKIREGDAKEIISIKNSIAEMKDAEIERSNKLLSLISYDQESGFIKNMAIIESNNNQYLAVGIIKLCGLEAVEAVFGVDERNKIVRKLCQRIAEKYAQCCDIVTFNADLYLLLCRENVQTFTRKIAMVNDFDSSFGYRNLRIHKSAICEPLQGENAWSYAEKLKLAISSIRDHMFSEFIFCDDAKLNEIEENIWIARNIRHAMEIGELFLVYQPIVDINTRAILGAEALCRWVSAERGIISPLKFITIAEDIGFINELGYQIIKTAMGEFRHFSQRASLKDDFLLHINVSPWQLNEPHFHERFTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVRISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIAEGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE", + "protein_translation_length": 782, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0002841" + ], + [ + "gene_synonym", + "ECK0824" + ], + [ + "gene_synonym", + "EcoGene:EG13477" + ], + [ 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"EcoGene:EG10947" + ], + [ + "gene_synonym", + "GI:16128860" + ], + [ + "gene_synonym", + "GeneID:945506" + ], + [ + "gene_synonym", + "JW0876" + ], + [ + "gene_synonym", + "NP_415413.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8L1" + ], + [ + "gene_synonym", + "b0893" + ], + [ + "gene_synonym", + "serS" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG10233" + ], + [ + "gene_synonym", + "GI:16128862" + ], + [ + "gene_synonym", + "GeneID:945507" + ], + [ + "gene_synonym", + "JW0878" + ], + [ + "gene_synonym", + "NP_415415.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P18776" + ], + [ + "gene_synonym", + "b0895" + ], + [ + "gene_synonym", + "dmsB" + ] + ], + "dna_sequence": "ATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCAAAACCTGCGAGCTGGCCTGTAAAGACTACAAAGATTTGACGCCAGAAGTCAGCTTCCGCCGCATTTATGAATATGCTGGCGGCGACTGGCAGGAAGATAACGGTGTCTGGCACCAGAACGTGTTTGCCTACTATCTGTCGATTTCATGTAACCACTGCGAAGATCCGGCTTGTACTAAAGTCTGCCCGAGCGGTGCGATGCATAAACGTGAAGATGGTTTTGTTGTGGTCGATGAAGATGTGTGCATTGGCTGCCGCTACTGCCATATGGCTTGCCCGTATGGCGCACCGCAATATAACGAAACGAAAGGCCATATGACCAAATGCGATGGTTGTTATGACCGTGTTGCGGAGGGTAAAAAGCCGATCTGTGTTGAATCTTGTCCGCTGCGGGCGCTGGATTTCGGCCCTATCGACGAGCTGCGTAAAAAACATGGCGATCTGGCGGCCGTTGCGCCGTTGCCGCGAGCTCACTTTACCAAACCGAATATTGTGATCAAACCCAATGCCAATAGCCGCCCGACCGGGGATACCACTGGCTATCTGGCAAACCCGAAGGAGGTGTGA", + 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regulator" + ], + "id": "CDS_881", + "location": [ + [ + "NC_000913", + 949568, + "-", + 909 + ] + ], + "md5": "3aa8ad6cad0d58ffc44785e0ef51441d", + "parent_gene": "", + "protein_md5": "357aced78900dc6ca3132390a7ae1e35", + "protein_translation": "MRMNMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQRLKIRLFNRTTRSVSLTEAGSNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINAARVAARIFLMSLLVGFTREYPDIKVELTTDDSLVDIVQQGFDAGVRLSCIVEKDMISVAIGPPVKLCVAATPEYFARYGKPRHPHDLLNHQCVVFRYPSGKPFHWQFAKELEIAVAGNIILDDVDAELEAVLMGAGIGYLLYEQIKEYLDTGRLECVLEDWSTERPGFQIYYPNRQYMSCGLRAFLDYVKTGQICQSQRHRPQ", + "protein_translation_length": 302, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003065" + ], + [ + "gene_synonym", + "ECK0892" + ], + [ + "gene_synonym", + "EcoGene:EG12702" + ], + [ + "gene_synonym", + "GI:16128868" + ], + [ + "gene_synonym", + "GeneID:945520" + ], + [ + "gene_synonym", + "JW0884" + ], + [ + "gene_synonym", + "NP_415421.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43340" + ], + [ + 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"-", + 858 + ] + ], + "md5": "41a0da1fa3bd16289cabff1135b7ec1b", + "parent_gene": "", + "protein_md5": "7aa777189b5ba6c32d0c25be72bd0662", + "protein_translation": "MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVFISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWVIYLRENDHH", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003081" + ], + [ + "gene_synonym", + "ECK0896" + ], + [ + "gene_synonym", + "EcoGene:EG13699" + ], + [ + "gene_synonym", + "GI:90111185" + ], + [ + "gene_synonym", + "GeneID:945509" + ], + [ + "gene_synonym", + "JW0888" + ], + [ + "gene_synonym", + "NP_415425.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75838" + ], + [ + "gene_synonym", + "b0905" + ], + [ + "gene_synonym", + "ycaO" + ] + ], + "dna_sequence": 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"8b942c35860846a30392f6a1560ac9f7", + "protein_translation": "MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRGVRQMSLFEVLIILTLGSAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLEDLLEGKPVVIIEDGELAWSKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQISVYFFEDDKVKPGLLILPSDCTQRYKVVPESADYACIRCSEIIHMKAGEKQLCPRCANPEWTKASRAKRVT", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003093" + ], + [ + "gene_synonym", + "ECK0898" + ], + [ + "gene_synonym", + "EcoGene:EG10946" + ], + [ + "gene_synonym", + "GI:16128874" + ], + [ + "gene_synonym", + "GeneID:945527" + ], + [ + "gene_synonym", + "JW0890" + ], + [ + "gene_synonym", + "NP_415427.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23721" + ], + [ + "gene_synonym", + "b0907" + ], + [ + "gene_synonym", + "pdxC" + ], + [ + "gene_synonym", + "pdxF" + ], + [ + "gene_synonym", + "serC" + ] + ], + "dna_sequence": 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"GeneID:945528" + ], + [ + "gene_synonym", + "JW0891" + ], + [ + "gene_synonym", + "NP_415428.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6D3" + ], + [ + "gene_synonym", + "aroA" + ], + [ + "gene_synonym", + "b0908" + ] + ], + "dna_sequence": 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"GI:16128881" + ], + [ + "gene_synonym", + "GeneID:945530" + ], + [ + "gene_synonym", + "JW0897" + ], + [ + "gene_synonym", + "NP_415434.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60752" + ], + [ + "gene_synonym", + "b0914" + ], + [ + "gene_synonym", + "msbA" + ] + ], + "dna_sequence": 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"bbf5f34fe903483125d29ab15be37248", + "protein_translation": "MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNHAFLMDFQEYLEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYLYLSPERLANEGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLNRLRRLGMVWFMGHDSSKFRITESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQLNDETEENQPDSGEEE", + "protein_translation_length": 234, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003138" + ], + [ + "gene_synonym", + "ECK0915" + ], + [ + "gene_synonym", + "EcoGene:EG10618" + ], + [ + "gene_synonym", + "GI:16128891" + ], + [ + "gene_synonym", + "GeneID:945549" + ], + [ + "gene_synonym", + "JW0907" + ], + [ + "gene_synonym", + "NP_415444.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22523" + ], + [ + "gene_synonym", + "b0924" + ], + [ + "gene_synonym", + "mukB" + ] + ], + "dna_sequence": "ATGATTGAACGCGGTAAATTTCGCTCACTGACGCTGATTAACTGGAACGGCTTTTTTGCCCGAACTTTTGACCTTGACGAGCTGGTCACGACGCTTTCTGGCGGTAACGGGGCGGGTAAATCCACCACCATGGCGGCGTTCGTTACGGCGCTGATCCCCGACCTGACCCTGCTGCATTTCCGTAACACTACGGAAGCCGGGGCCACCAGCGGTTCGCGCGATAAAGGTCTGCACGGTAAGCTGAAAGCGGGTGTCTGTTATTCGATGCTCGACACCATTAACTCGCGCCACCAGCGCGTGGTGGTCGGTGTGCGTCTGCAACAGGTTGCCGGACGCGATCGTAAAGTGGATATCAAGCCGTTTGCCATTCAGGGACTGCCGATGTCGGTGCAGCCGACACAGCTGGTGACCGAAACCCTGAACGAACGCCAGGCGCGCGTGCTGCCGCTTAACGAGCTGAAAGACAAGCTCGAGGCGATGGAAGGCGTGCAGTTTAAACAGTTCAACTCCATTACTGATTACCACTCGCTGATGTTCGATCTGGGCATCATCGCGCGTCGTCTGCGCTCCGCATCTGACCGTAGCAAATTCTATCGTCTGATCGAAGCTTCGCTGTATGGCGGGATCTCCAGTGCCATTACCCGTTCTCTGCGCGACTACCTGTTGCCAGAAAACAGCGGCGTGCGTAAAGCGTTCCAGGACATGGAAGCGGCGCTGCGTGAAAACCGTATGACGCTGGAAGCGATTCGTGTCACCCAGTCGGACCGCGACCTGTTTAAGCATCTGATCAGCGAAGCCACCAACTACGTGGCGGCGGACTACATGCGTCACGCCAACGAGCGCCGTGTCCATCTCGACAAAGCCCTGGAGTTTCGTCGCGAGCTACATACTTCGCGTCAGCAACTGGCGGCTGAGCAGTACAAACACGTCGATATGGCGCGTGAGCTGGCAGAGCACAACGGTGCCGAAGGCGATCTGGAAGCGGATTATCAGGCGGCCAGTGATCACCTGAACCTGGTGCAAACCGCACTGCGTCAGCAGGAGAAGATCGAACGCTACGAAGCGGATCTCGATGAGCTGCAGATCCGTCTGGAAGAGCAAAATGAAGTGGTGGCAGAAGCCATCGAACGCCAGCAAGAGAATGAGGCTCGTGCGGAAGCTGCCGAACTGGAAGTGGACGAGCTGAAAAGCCAGCTTGCTGACTACCAGCAGGCGCTGGACGTCCAGCAAACGCGCGCGATCCAGTATAACCAGGCGATTGCTGCGCTTAATCGTGCCAAAGAACTGTGCCATCTGCCGGACTTAACCGCCGACTGCGCCGCCGAATGGCTGGAAACCTTCCAGGCGAAAGAGCTGGAAGCGACTGAAAAAATGCTCTCTCTTGAGCAGAAAATGAGCATGGCGCAAACCGCGCACAGCCAGTTTGAGCAGGCTTATCAGCTGGTGGTGGCAATCAACGGCCCACTGGCGCGTAACGAGGCGTGGGATGTCGCTCGCGAACTATTGCGCGAAGGGGTCGATCAGCGTCACCTGGCAGAGCAGGTTCAGCCGCTGCGGATGCGATTAAGCGAACTGGAACAGCGTCTACGCGAGCAGCAAGAAGCTGAGCGTCTGCTGGCAGATTTCTGCAAACGTCAGGGCAAGAATTTTGATATCGACGAACTGGAAGCCCTGCATCAGGAACTGGAAGCACGCATTGCCTCTCTTTCCGATAGCGTGTCTAACGCCCGTGAAGAGCGCATGGCACTGCGCCAGGAGCAGGAACAGCTGCAGTCTCGCATTCAGAGTTTGATGCAGCGTGCGCCGGTTTGGCTGGCAGCGCAAAACAGTCTCAACCAGTTGAGCGAACAGTGCGGCGAAGAGTTTACCTCCAGCCAGGACGTCACCGAATATCTGCAACAGTTGCTGGAGCGTGAGCGAGAGGCGATTGTTGAACGCGATGAAGTGGGCGCGCGCAAAAACGCCGTCGATGAAGAGATCGAACGTTTAAGCCAGCCTGGCGGCTCTGAAGATCAGCGTCTGAACGCGCTGGCGGAGCGTTTTGGTGGTGTGCTGCTGTCAGAAATTTATGACGACGTTAGCCTGGAAGATGCGCCGTACTTCTCAGCGCTGTATGGCCCGTCACGCCACGCCATCGTGGTGCCAGATCTGTCACAGGTAACTGAACACCTGGAAGGCTTGACCGATTGCCCGGAAGATCTCTATCTGATCGAAGGAGATCCGCAGTCATTCGATGACAGCGTGTTCAGCGTTGATGAGCTGGAAAAAGCGGTAGTGGTGAAAATCGCCGATCGTCAGTGGCGTTATTCACGTTTCCCGGAAGTGCCGCTGTTTGGTCGTGCTGCGCGTGAAAGCCGTATTGAAAGCCTCCATGCCGAGCGTGAAGTGCTTTCCGAACGCTTCGCCACGCTCTCCTTTGATGTACAGAAAACTCAGCGTCTGCATCAGGCGTTCAGCCGCTTTATCGGCAGTCATCTGGCGGTTGCGTTTGAGTCTGACCCGGAAGCAGAAATCCGTCAACTGAACAGCCGTCGCGTCGAACTGGAGCGGGCGTTAAGTAATCATGAAAATGATAACCAGCAGCAGCGTATTCAGTTTGAGCAGGCGAAAGAGGGCGTTACGGCGCTGAACCGCATTCTGCCGCGTCTCAACCTGTTGGCTGATGACAGCCTGGCGGATCGCGTCGATGAAATCCGCGAACGTCTGGATGAAGCCCAGGAAGCCGCGCGTTTTGTTCAGCAGTTTGGCAATCAACTGGCGAAACTGGAACCGATTGTTTCGGTATTGCAGAGCGACCCGGAACAGTTCGAACAGTTAAAAGAAGATTACGCGTACTCTCAGCAGATGCAGCGCGATGCCCGTCAGCAGGCGTTTGCCCTGACGGAAGTGGTGCAGCGTCGTGCGCACTTTAGCTATTCTGACTCGGCAGAAATGCTTAGCGGTAACAGCGATCTCAACGAAAAACTGCGTGAACGTCTGGAACAGGCGGAAGCGGAGCGTACCCGCGCTCGCGAAGCGTTGCGCGGTCACGCAGCGCAGTTGAGTCAGTACAACCAGGTGCTGGCTTCGCTGAAAAGTTCTTACGACACCAAAAAAGAGCTACTCAACGATCTGCAACGTGAATTGCAGGATATCGGCGTGCGTGCTGATAGCGGGGCAGAAGAGCGGGCGCGTATTCGCCGTGACGAGCTGCATGCGCAACTGAGCAATAACCGTTCACGCCGCAATCAACTGGAAAAAGCGCTTACCTTCTGCGAAGCGGAGATGGACAACCTGACCCGCAAACTGCGCAAGCTGGAGCGGGATTACTTTGAGATGCGCGAGCAGGTAGTGACCGCCAAAGCGGGCTGGTGTGCGGTGATGCGCATGGTGAAAGATAACGGCGTTGAGCGCCGCTTACACCGTCGTGAGCTGGCTTATCTCTCCGCTGATGATTTGCGTTCCATGTCGGATAAGGCGTTAGGTGCGCTGCGTCTGGCGGTGGCGGATAACGAACATCTGCGCGACGTGCTGCGCATGTCGGAAGATCCGAAACGTCCGGAGCGTAAAATTCAGTTCTTCGTGGCGGTTTATCAGCATCTGCGTGAACGTATTCGTCAGGATATTATTCGTACCGATGATCCGGTGGAAGCTATCGAACAGATGGAGATTGAACTTAGCCGTCTGACCGAAGAATTAACCTCCCGTGAACAGAAACTGGCGATCAGTTCCCGCAGCGTGGCGAACATCATTCGCAAAACCATTCAGCGCGAGCAGAACCGTATCCGTATGCTCAACCAGGGGTTGCAGAACGTATCGTTTGGTCAGGTGAACAGCGTGCGTCTCAACGTGAACGTGCGTGAAACGCACGCCATGCTACTGGATGTGCTCTCTGAACAGCACGAGCAGCATCAGGATCTGTTTAACAGCAACCGTTTGACCTTCTCGGAAGCGCTGGCGAAACTGTATCAACGTCTTAACCCGCAGATTGATATGGGGCAGCGCACGCCGCAGACCATCGGTGAAGAACTGCTGGATTACCGCAACTATCTGGAAATGGAAGTTGAGGTTAACCGTGGTTCCGATGGCTGGCTGCGCGCAGAGTCTGGTGCATTGTCGACCGGTGAGGCGATTGGTACCGGTATGTCGATTCTGGTGATGGTGGTACAAAGCTGGGAAGATGAATCTCGCCGCCTGCGCGGTAAAGATATCTCTCCTTGCCGCCTGCTGTTCCTCGATGAAGCAGCGCGACTGGATGCTCGTTCTATCGCCACGCTGTTTGAATTGTGTGAGCGTTTGCAAATGCAACTCATCATCGCAGCGCCGGAAAATATCAGCCCGGAGAAAGGCACCACCTATAAACTGGTGCGTAAAGTCTTCCAGAATACCGAACACGTTCATGTCGTCGGCCTGCGAGGATTTGCGCCGCAACTCCCTGAAACGCTTCCAGGAACTGACGAAGCGCCTTCTCAGGCGAGTTAA", 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"MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTMAAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVVGVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAMEGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLRDYLLPENSGVRKAFQDMEAALRENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMRHANERRVHLDKALEFRRELHTSRQQLAAEQYKHVDMARELAEHNGAEGDLEADYQAASDHLNLVQTALRQQEKIERYEADLDELQIRLEEQNEVVAEAIERQQENEARAEAAELEVDELKSQLADYQQALDVQQTRAIQYNQAIAALNRAKELCHLPDLTADCAAEWLETFQAKELEATEKMLSLEQKMSMAQTAHSQFEQAYQLVVAINGPLARNEAWDVARELLREGVDQRHLAEQVQPLRMRLSELEQRLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARIASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTSSQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFGGVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVTEHLEGLTDCPEDLYLIEGDPQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAEREVLSERFATLSFDVQKTQRLHQAFSRFIGSHLAVAFESDPEAEIRQLNSRRVELERALSNHENDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRERLDEAQEAARFVQQFGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFALTEVVQRRAHFSYSDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQVLASLKSSYDTKKELLNDLQRELQDIGVRADSGAEERARIRRDELHAQLSNNRSRRNQLEKALTFCEAEMDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADDLRSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAVYQHLRERIRQDIIRTDDPVEAIEQMEIELSRLTEELTSREQKLAISSRSVANIIRKTIQREQNRIRMLNQGLQNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLNPQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSILVMVVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPENISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGTDEAPSQAS", 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"gene_synonym", + "GeneID:945554" + ], + [ + "gene_synonym", + "JW0912" + ], + [ + "gene_synonym", + "NP_415449.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02931" + ], + [ + "gene_synonym", + "b0929" + ], + [ + "gene_synonym", + "cmlB" + ], + [ + "gene_synonym", + "coa" + ], + [ + "gene_synonym", + "cry" + ], + [ + "gene_synonym", + "nfxB?" + ], + [ + "gene_synonym", + "ompF" + ], + [ + "gene_synonym", + "tolF" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW0913" + ], + [ + "gene_synonym", + "NP_415450.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8M0" + ], + [ + "gene_synonym", + "asnS" + ], + [ + "gene_synonym", + "b0930" + ], + [ + "gene_synonym", + "lcs" + ], + [ + "gene_synonym", + "tss" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:947253" + ], + [ + "gene_synonym", + "JW0915" + ], + [ + "gene_synonym", + "NP_415452.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P04825" + ], + [ + "gene_synonym", + "b0932" + ], + [ + "gene_synonym", + "pepN" + ] + ], + "dna_sequence": 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"MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVRHGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEGALVISNLPERFTLKIINEISPAANTALEGLYQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANYQSEYRVEHEDIAKRTLRNACLRFLAFGETHLADVLVSKQFHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFHAEDGSGYLFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLENLSGDLYEKITKALA", + "protein_translation_length": 870, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003173" + ], + 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"gene_synonym", + "ECK0932" + ], + [ + "gene_synonym", + "EcoGene:EG13712" + ], + [ + "gene_synonym", + "GI:16128908" + ], + [ + "gene_synonym", + "GeneID:947185" + ], + [ + "gene_synonym", + "JW0924" + ], + [ + "gene_synonym", + "NP_415461.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75858" + ], + [ + "gene_synonym", + "b0941" + ], + [ + "gene_synonym", + "elfG" + ], + [ + "gene_synonym", + "ycbT" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW0925" + ], + [ + "gene_synonym", + "NP_415462.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75859" + ], + [ + "gene_synonym", + "b0942" + ], + [ + "gene_synonym", + "ycbU" + ] + ], + "dna_sequence": "ATGAAGAAAAAAACGATATTTCAGTGCGTTATCTTGTTCTTTAGCATTCTTAACATCCATGTCGGGATGGCTGGGCCTGAACAAGTTAGTATGCATATTTATGGGAATGTGGTCGATCAGGGCTGTGATGTCGCCACCAAAAGTGCATTACAAAATATTCATATTGGTGATTTTAATATCAGTGATTTTCAGGCCGCGAATACCGTAAGCACTGCTGCTGATTTGAATATCGATATCACCGGTTGTGCCGCTGGTATTACTGGCGCGGACGTCCTTTTTAGCGGCGAGGCTGACACCCTTGCGCCGACACTGCTCAAACTAACTGACACAGGCGGAAGCGGTGGTATGGCAACGGGGATTGCCGTGCAAATTCTTGATGCGCAAAGTCAGCAAGAAATCCCGCTCAATCAGGTCCAGCCTCTTACGCCCTTAAAAGCCGGGGATAACACACTCAAATATCAACTTCGTTATAAGTCCACAAAGGCGGGAGCAACGGGCGGTAATGCGACGGCGGTTCTCTATTTTGATCTGGTTTACCAGTGA", + "dna_sequence_length": 543, + "functions": [ + "putative fimbriae protein" + ], + "id": "CDS_923", + "location": [ + [ + "NC_000913", + 1002889, + "+", + 543 + ] + ], + "md5": "06985a1b327f3fbcdfc48c44d331a48d", + "parent_gene": "", + "protein_md5": "a4f4dea78477e0cad4ffd10432617020", + "protein_translation": "MKKKTIFQCVILFFSILNIHVGMAGPEQVSMHIYGNVVDQGCDVATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAPTLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKSTKAGATGGNATAVLYFDLVYQ", + "protein_translation_length": 180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003195" + ], + [ + "gene_synonym", + "ECK0934" + ], + [ + "gene_synonym", + "EcoGene:EG13714" + ], + [ + "gene_synonym", + "GI:90111191" + ], + [ + "gene_synonym", + "GeneID:945562" + ], + [ + "gene_synonym", + "JW5123" + ], + [ + "gene_synonym", + "NP_415463.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75860" + ], + [ + "gene_synonym", + "b0943" + ], + [ + "gene_synonym", + "ycbV" + ] + ], + "dna_sequence": "ATGTTGAAACGGATAATCTGGATTCTGTTCTTATTGGGATTAACGTGGGGCTGTGAGCTATTTGCCCATGATGGCACGGTCAACATTAGCGGATCGTTTCGCCGTAATACATGCGTGCTGGCACAGGATAGCAAGCAAATCAATGTGCAGTTAGGCGATGTCTCGCTGACACGTTTTTCTCATGGGAATTATGGCCCGGAGAAATCTTTCATCATTAATTTGCAGGATTGCGGAACAGATGTCAGCACGGTTGACGTCACCTTTTCAGGAACCCCCGACGGAGTGCAGAGCGAAATGTTGTCCATTGAAAGTGGTACGGATGCAGCCAGCGGGCTGGCAATTGCGATTCTGGATGATGCGAAGATATTGATTCCGCTTAACCAGGCGAGTAAAGACTACAGCCTACATAGCGGTAAGGTGCCATTAACTTTTTATGCGCAATTGCGACCTGTCAATAGCGATGTGCAGTCGGGTAAAGTGAATGCCAGCGCGACATTTGTACTTCATTATGACTAA", + "dna_sequence_length": 516, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_924", + "location": [ + [ + "NC_000913", + 1003439, + "+", + 516 + ] + ], + "md5": "2ecd1a689451dc52fd676bc0552c0a98", + "parent_gene": "", + "protein_md5": "15e74fc5841c10fbae4b43f485281b38", + "protein_translation": "MLKRIIWILFLLGLTWGCELFAHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSHGNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLSIESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD", + "protein_translation_length": 171, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003197" + ], + [ + "gene_synonym", + "ECK0935" + ], + [ + "gene_synonym", + "EcoGene:EG12397" + ], + [ + "gene_synonym", + "GI:90111192" + ], + [ + "gene_synonym", + "GeneID:945559" + ], + [ + "gene_synonym", + "JW5124" + ], + [ + "gene_synonym", + "NP_415464.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P40876" + ], + [ + "gene_synonym", + "b0944" + ], + [ + "gene_synonym", + "ycbF" + ] + ], + "dna_sequence": "ATGACTAATACGTGGAACAGATTGGCGCTCTTGATTTTCGCCGTTTTATCGCTGCTGGTGGCGGGTGAATTGCAGGCAGGAGTGGTGGTCGGCGGAACGCGATTTATCTTTCCGGCAGACAGAGAATCGATATCTATTTTACTGACTAATACCAGTCAGGAATCCTGGCTTATTAACAGTAAAATCAACCGCCCAACGCGTTGGGCCGGGGGGGAAGCGTCGACAGTGCCAGCACCATTACTGGCCGCTCCGCCACTTATTCTCCTGAAGCCCGGTACGACAGGCACGTTGCGCTTGCTGAGAACGGAAAGCGACATCTTGCCTGTGGATCGCGAAACGCTATTTGAGTTAAGCATTGCCAGCGTGCCATCCGGCAAAGTTGAAAATCAGAGCGTAAAAGTGGCGATGCGCTCGGTATTTAAACTGTTCTGGCGACCCGAAGGTTTGCCGGGCGACCCGCTGGAAGCTTATCAACAATTACGCTGGACACGGAATTCGCAGGGTGTACAACTCACTAACCCAACGCCTTATTACATTAACCTGATTCAGGTGAGTGTAAATGGTAAAGCGTTAAGTAATGTGGGAGTTGTGCCGCCTAAAAGCCAGCGTCAGACAAGCTGGTGTCAGGCAATCGCACCGTGTCATGTCGCCTGGCGGGCGATAAATGATTACGGCGGGTTGAGTGCAAAGAAGGAGCAAAATCTGCCCTGA", + "dna_sequence_length": 711, + "functions": [ + "putative periplasmic pilin chaperone" + ], + "id": "CDS_925", + "location": [ + [ + "NC_000913", + 1003947, + "+", + 711 + ] + ], + "md5": "cd25eb58b4383e4e9ee991f2ac84b87b", + "parent_gene": "", + "protein_md5": "03bbf7ed385172c5b08ce47bd248169b", + "protein_translation": "MTNTWNRLALLIFAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTRWAGGEASTVPAPLLAAPPLILLKPGTTGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNVGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGGLSAKKEQNLP", + "protein_translation_length": 236, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003201" + ], + [ + "gene_synonym", + "ECK0936" + ], + [ + "gene_synonym", + "EcoGene:EG10807" + ], + [ + "gene_synonym", + "GI:16128912" + ], + [ + "gene_synonym", + "GeneID:945556" + ], + [ + "gene_synonym", + "JW0928" + ], + [ + "gene_synonym", + "NP_415465.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7E1" + ], + [ + "gene_synonym", + "b0945" + ], + [ + "gene_synonym", + "pyrD" + ] + ], + "dna_sequence": "ATGTACTACCCCTTCGTTCGTAAAGCCCTTTTCCAGCTCGATCCAGAGCGCGCTCATGAGTTTACTTTTCAGCAATTACGCCGTATTACAGGAACGCCGTTTGAAGCACTGGTGCGGCAGAAAGTGCCTGCGAAACCTGTTAACTGCATGGGCCTGACGTTTAAAAATCCGCTTGGTCTGGCAGCCGGTCTTGATAAAGACGGGGAGTGCATTGACGCGTTAGGCGCGATGGGATTTGGATCGATCGAGATCGGTACCGTCACGCCACGTCCACAGCCAGGTAATGACAAGCCGCGTCTCTTTCGTCTGGTAGATGCCGAAGGTTTGATCAACCGTATGGGCTTTAATAATCTTGGCGTTGATAACCTCGTAGAGAACGTAAAAAAGGCCCATTATGACGGCGTCCTGGGTATTAACATCGGCAAAAATAAAGATACGCCAGTGGAGCAGGGCAAAGATGACTATCTGATTTGTATGGAAAAAATCTATGCCTATGCGGGATATATCGCCATCAATATTTCATCGCCGAATACCCCAGGATTACGCACGCTGCAATATGGTGAAGCGCTGGATGATCTCTTAACCGCGATTAAAAATAAGCAAAATGATTTGCAAGCGATGCACCATAAATATGTGCCGATCGCAGTGAAGATCGCGCCGGATCTTTCTGAAGAAGAATTGATCCAGGTTGCCGATAGTTTAGTTCGCCATAATATTGATGGCGTTATTGCAACCAATACCACACTCGATCGTTCTCTTGTTCAGGGAATGAAAAATTGCGATCAAACCGGTGGCTTAAGTGGTCGTCCGCTTCAGTTAAAAAGCACCGAAATTATTCGCCGCTTGTCACTGGAATTAAACGGTCGCTTACCGATCATCGGTGTTGGCGGCATCGACTCGGTTATCGCTGCGCGTGAAAAGATTGCTGCGGGTGCCTCACTGGTGCAAATTTATTCTGGTTTTATTTTTAAAGGTCCGCCGCTGATTAAAGAAATCGTTACCCATATCTAA", 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], + [ + "gene_synonym", + "NP_415466.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75862" + ], + [ + "gene_synonym", + "b0946" + ], + [ + "gene_synonym", + "ycbW" + ], + [ + "gene_synonym", + "zapC" + ] + ], + "dna_sequence": "ATGCGAATTAAACCAGACGATAACTGGCGTTGGTATTACGATGAAGAGCACGATCGAATGATGCTCGATTTAGCCAATGGTATGCTATTTCGCTCACGTTTTGCGCGCAAGATGTTGACTCCAGATGCCTTTTCTCCCGCAGGCTTTTGCGTTGACGACGCCGCGCTCTATTTCTCTTTTGAAGAAAAGTGCCGCGATTTTAATTTATCTAAAGAACAAAAAGCCGAACTGGTGCTGAATGCACTGGTAGCAATTCGCTATCTCAAACCGCAAATGCCGAAAAGCTGGCATTTTGTTTCCCATGGTGAAATGTGGGTGCCCATGCCGGGCGATGCGGCCTGCGTTTGGTTGAGCGATACTCACGAGCAGGTCAATTTGCTGGTCGTTGAATCTGGCGAAAATGCCGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATTGCGGGTCGCGCGATGCAGTTGGGCGACGCCATTAAAATCATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTCTAA", + "dna_sequence_length": 543, + "functions": [ + "FtsZ stabilizer" + ], + "id": "CDS_927", + "location": [ + [ + "NC_000913", + 1005952, + "+", + 543 + ] + ], + "md5": "d7a0da7dc052eee3f2e0b4697ea7c319", + "parent_gene": "", + "protein_md5": "46cd86b0ab1a1ff8395460bbf4878e7e", + "protein_translation": "MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV", + "protein_translation_length": 180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003206" + ], + [ + "gene_synonym", + "ECK0938" + ], + [ + "gene_synonym", + "EcoGene:EG13716" + ], + [ + "gene_synonym", + "GI:16128914" + ], + [ + "gene_synonym", + "GeneID:945563" + ], + [ + "gene_synonym", + "JW5126" + ], + [ + "gene_synonym", + "NP_415467.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75863" + ], + [ + "gene_synonym", + "b0947" + ], + [ + "gene_synonym", + "ycbX" + ] + ], + "dna_sequence": "GTGGCGACATTAATCCGGCTTTTTATTCATCCTGTTAAATCGATGCGCGGCATTGGTCTTACACATGCTCTGGCAGATGTCAGTGGTCTGGCCTTCGATCGCATCTTTATGATCACGGAACCTGACGGTACGTTTATTACCGCTCGCCAGTTTCCCCAGATGGTACGGTTTACTCCTTCACCTGTGCATGATGGCTTGCATCTCACCGCACCAGATGGCAGTAGCGCATATGTTCGTTTTGCTGATTTCGCCACACAAGACGCACCAACCGAAGTTTGGGGCACACATTTTACCGCGCGAATTGCGCCAGACGCGATCAACAAATGGCTAAGTGGATTTTTCTCCCGCGAAGTGCAATTACGCTGGGTGGGGCCACAAATGACCCGGCGCGTGAAACGCCACAACACTGTACCTCTGTCATTTGCTGATGGCTATCCTTACCTTCTTGCTAACGAAGCCTCGTTACGTGATCTCCAACAACGTTGTCCGGCCAGTGTAAAAATGGAGCAATTCCGCCCCAATCTGGTGGTTTCCGGCGCGTCAGCCTGGGAAGAAGATCGCTGGAAAGTGATTCGCATTGGTGATGTGGTGTTTGATGTGGTTAAACCTTGTAGCCGCTGTATTTTCACCACCGTCAGCCCAGAAAAAGGGCAAAAACATCCGGCAGGCGAACCATTAAAAACATTGCAATCTTTCCGCACTGCCCAGGATAACGGCGATGTCGATTTTGGTCAGAATTTAATTGCCCGTAATAGCGGCGTGATTCGCGTTGGCGATGAGGTGGAAATTCTGGCAACGGCTCCGGCAAAAATTTACGGCGCAGCTGCCGCTGATGATACCGCCAACATCACGCAACAACCGGACGCAAATGTAGATATTGACTGGCAGGGACAGGCATTTCGTGGAAATAACCAACAGGTGTTGCTGGAGCAATTAGAAAATCAGGGAATTCGTATCCCTTATTCTTGCCGCGCGGGCATTTGTGGAAGTTGCCGTGTTCAGCTTTTAGAAGGCGAAGTCACGCCGCTGAAAAAATCAGCAATGGGCGATGATGGCACCATTCTTTGCTGTAGCTGTGTACCGAAGACTGCACTTAAGTTGGCGCGTTAG", 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"GeneID:945564" + ], + [ + "gene_synonym", + "JW0931" + ], + [ + "gene_synonym", + "NP_415468.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75864" + ], + [ + "gene_synonym", + "b0948" + ], + [ + "gene_synonym", + "rlmK" + ], + [ + "gene_synonym", + "rlmKL" + ], + [ + "gene_synonym", + "rlmL" + ], + [ + "gene_synonym", + "ycbY" + ] + ], + "dna_sequence": 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"protein_translation_length": 635, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003219" + ], + [ + "gene_synonym", + "ECK0941" + ], + [ + "gene_synonym", + "EcoGene:EG12965" + ], + [ + "gene_synonym", + "GI:16128917" + ], + [ + "gene_synonym", + "GeneID:944999" + ], + [ + "gene_synonym", + "JW0933" + ], + [ + "gene_synonym", + "NP_415470.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFL9" + ], + [ + "gene_synonym", + "b0950" + ], + [ + "gene_synonym", + "pqi5" + ], + [ + "gene_synonym", + "pqiA" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16128918" + ], + [ + "gene_synonym", + "GeneID:945653" + ], + [ + "gene_synonym", + "JW0934" + ], + [ + "gene_synonym", + "NP_415471.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43671" + ], + [ + "gene_synonym", + "b0951" + ], + [ + "gene_synonym", + "pqi5" + ], + [ + "gene_synonym", + "pqiB" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG12193" + ], + [ + "gene_synonym", + "GI:16128966" + ], + [ + "gene_synonym", + "GeneID:947572" + ], + [ + "gene_synonym", + "JW0985" + ], + [ + "gene_synonym", + "NP_415520.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36659" + ], + [ + "gene_synonym", + "b1000" + ], + [ + "gene_synonym", + "cbpA" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P36661" + ], + [ + "gene_synonym", + "b1001" + ], + [ + "gene_synonym", + "yccE" + ] + ], + "dna_sequence": 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"protein_translation": "MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPKFAQKAALFNIETFFGWVSDVETFCDALSPTSFAHIA", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003416" + ], + [ + "gene_synonym", + "ECK1003" + ], + [ + "gene_synonym", + "EcoGene:EG13859" + ], + [ + "gene_synonym", + "GI:49176071" + ], + [ + "gene_synonym", + "GeneID:945643" + ], + [ + "gene_synonym", + "JW0997" + ], + [ + "gene_synonym", + "NP_415532.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75898" + ], + [ + "gene_synonym", + "b1012" + ], + [ + "gene_synonym", + "rutA" + ], + [ + "gene_synonym", + "ycdM" + ] + ], + "dna_sequence": 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"GeneID:946500" + ], + [ + "gene_synonym", + "JW1004" + ], + [ + "gene_synonym", + "NP_415538.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31545" + ], + [ + "gene_synonym", + "b1019" + ], + [ + "gene_synonym", + "efeB" + ], + [ + "gene_synonym", + "ycdB" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "GeneID:948010" + ], + [ + "gene_synonym", + "JW1005" + ], + [ + "gene_synonym", + "NP_415539.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9K1" + ], + [ + "gene_synonym", + "b1020" + ], + [ + "gene_synonym", + "phoH" + ], + [ + "gene_synonym", + "psiH" + ] + ], + "dna_sequence": 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"GeneID:947503" + ], + [ + "gene_synonym", + "JW1006" + ], + [ + "gene_synonym", + "NP_415540.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69432" + ], + [ + "gene_synonym", + "b1021" + ], + [ + "gene_synonym", + "hmsS" + ], + [ + "gene_synonym", + "pgaD" + ], + [ + "gene_synonym", + "ycdP" + ] + ], + "dna_sequence": "ATGAACAATTTAATTATTACGACCCGACAATCACCAGTACGTTTACTGGTTGATTATGTTGCCACAACCATCTTGTGGACATTATTTGCGTTGTTCATATTCTTATTCGCCATGGATCTGCTGACGGGTTATTACTGGCAAAGCGAGGCCAGAAGCCGACTTCAGTTCTATTTTTTGCTGGCAGTGGCGAATGCCGTCGTGTTAATTGTCTGGGCGCTGTACAATAAGCTGCGTTTTCAAAAACAGCAGCATCATGCAGCCTACCAATATACGCCGCAAGAATATGCAGAGAGCTTAGCAATACCTGATGAGCTCTATCAGCAACTACAAAAAAGCCACAGGATGAGCGTACACTTCACCAGCCAGGGGCAAATAAAAATGGTTGTTTCAGAAAAAGCGCTAGTCCGGGCATAA", + "dna_sequence_length": 414, + "functions": [ + "biofilm PGA synthase PgaCD, regulatory subunit", + "c-di-GMP-stimulated activity and dimerization" + ], + "id": "CDS_1003", + "location": [ + [ + "NC_000913", + 1086519, + "-", + 414 + ] + ], + "md5": 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"JW1010" + ], + [ + "gene_synonym", + "NP_415543.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69434" + ], + [ + "gene_synonym", + "b1024" + ], + [ + "gene_synonym", + "pgaA" + ], + [ + "gene_synonym", + "ycdS" + ] + ], + "dna_sequence": 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+ ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q7DFV4" + ], + [ + "gene_synonym", + "b1028" + ], + [ + "gene_synonym", + "ymdE" + ] + ], + "dna_sequence": "GCCTGGCACACGCGTTTGATGGAAGACGGCGTTCAGGCAATGCGCGATTATCTTGCCGGACTGGATATCGCTTCGCCAGAGCATCAGGTTCTGATGAACGTAACAGCAAAAAGCGAGGTCGCTCCGTCAATTATCAAAGAAAATCTCTCATTACACTTAACTCATACGGTGAAATGGACTGAATCTCTCGATACATTTCTGAATATGCCAACCCCGGTAGCTTTCCTTGAAATAAGTAATAAGCCCTATTTGGGGAATATGTTAAATGATTTTGCTGGCGTGGATCAGCAACGAGTTATGCATTGTCGTAAAGCATTTAGTGATGCAAAGGTATTCAAATGA", + "dna_sequence_length": 342, + "id": "CDS_1010", + "location": [ + [ + "NC_000913", + 1095505, + "+", + 342 + ] + ], + "md5": "164b87cf6905d554f3d87ba80f47f60c", + "parent_gene": "", + "protein_md5": "e9009a37473a2cf2c69ac918de4271c2", + "protein_translation": "AWHTRLMEDGVQAMRDYLAGLDIASPEHQVLMNVTAKSEVAPSIIKENLSLHLTHTVKWTESLDTFLNMPTPVAFLEISNKPYLGNMLNDFAGVDQQRVMHCRKAFSDAKVFK", + "protein_translation_length": 113, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003489" + ], + [ + "gene_synonym", + "ECK1017" + ], + [ + "gene_synonym", + "EcoGene:EG13867" + ], + [ + "gene_synonym", + "GI:16128993" + ], + [ + "gene_synonym", + "GeneID:945592" + ], + [ + "gene_synonym", + "JW1015" + ], + [ + "gene_synonym", + "NP_415548.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75910" + ], + [ + "gene_synonym", + "b1029" + ], + [ + "gene_synonym", + "ycdU" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:946216" + ], + [ + "gene_synonym", + "JW1041" + ], + [ + "gene_synonym", + "NP_415572.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACV0" + ], + [ + "gene_synonym", + "b1054" + ], + [ + "gene_synonym", + "htrB" + ], + [ + "gene_synonym", + "lpxL" + ], + [ + "gene_synonym", + "waaM" + ] + ], + "dna_sequence": 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protein (ACP)-dependent acyltransferase" + ], + "id": "CDS_1032", + "location": [ + [ + "NC_000913", + 1116582, + "-", + 921 + ] + ], + "md5": "2c9c7ffe1f607cbf3f7ed45d16eb99ef", + "parent_gene": "", + "protein_md5": "6c599b7fb76e732c980913832a93871c", + "protein_translation": "MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGLGKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDRRIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPLIDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQAATTTGTWMLARMSGACLVPFVPRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKVVEKCIMMAPEQYMWLHRRFKTRPEGVPSRY", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003581" + ], + [ + "gene_synonym", + "ECK1040" + ], + [ + "gene_synonym", + "EcoGene:EG11116" + ], + [ + "gene_synonym", + "GI:16129018" + ], + [ + "gene_synonym", + "GeneID:945601" + ], + [ + "gene_synonym", + "JW1042" + ], + [ + "gene_synonym", + "NP_415573.1" + ], + [ + "gene_synonym", + 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"gene_synonym", + "NP_415600.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33235" + ], + [ + "gene_synonym", + "b1082" + ], + [ + "gene_synonym", + "flaS" + ], + [ + "gene_synonym", + "flgK" + ] + ], + "dna_sequence": 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"ASAP:ABE-0003666" + ], + [ + "gene_synonym", + "ECK1068" + ], + [ + "gene_synonym", + "EcoGene:EG11545" + ], + [ + "gene_synonym", + "GI:16129046" + ], + [ + "gene_synonym", + "GeneID:945646" + ], + [ + "gene_synonym", + "JW1070" + ], + [ + "gene_synonym", + "NP_415601.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P29744" + ], + [ + "gene_synonym", + "b1083" + ], + [ + "gene_synonym", + "flaT" + ], + [ + "gene_synonym", + "flgL" + ] + ], + "dna_sequence": 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"functions": [ + "flagellar hook-filament junction protein" + ], + "id": "CDS_1061", + "location": [ + [ + "NC_000913", + 1140033, + "+", + 954 + ] + ], + "md5": "38b4c7da86aa443757a984cc1c26c594", + "parent_gene": "", + "protein_md5": "b8fdcc9a6bb467597e983f2b572b97df", + "protein_translation": "MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQYTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDDDRASLATDIQGLRDQLLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESIKQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESLDSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLFQLSK", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003668" + ], + [ + "gene_synonym", + "ECK1069" + ], + [ + "gene_synonym", + "EcoGene:EG10859" + ], + [ + "gene_synonym", + "GI:16129047" + ], + [ + "gene_synonym", + "GeneID:945641" + ], + [ + "gene_synonym", + "JW1071" + ], + [ + "gene_synonym", + "NP_415602.1" + ], + 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"MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYMLPKLHEEAMALPSEEEFAERKRPEQPALATFAMPDVPPAPTPAEPAAPVVAPAPKAAPATPAAPAQPGLLSRFFGALKALFSGGEETKPTEQPAPKAEAKPERQQDRRKPRQNNRRDRNERRDTRSERTEGSDNREENRRNRRQAQQQTAETRESRQQAEVTEKARTADEQQAPRRERSRRRNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRRKQRQLNQKVRYEQSVAEEAVVAPVVEETVAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQQEENNADNRDNGGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASGKVWIRYPIVRPQDVQVEEQREQEEVHVQPMVTEVPVAAAIEPVVSAPVVEEVAGVVEAPVQVAEPQPEVVETTHPEVIAAAVTEQPQVITESDVAVAQEVAEQAEPVVEPQEETADIEEVVETAEVVVAEPEVVAQPAAPVVAEVAAEVETVAAVEPEVTVEHNHATAPMTRAPAPEYVPEAPRHSDWQRPTFAFEGKGAAGGHTATHHASAAPARPQPVE", 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1144502, + "+", + 321 + ] + ], + "md5": "985d9ba8d5364c6a1bfd69d156d9c212", + "parent_gene": "", + "protein_md5": "1a7f91c874a9ba2ccb82ed6f20bb63a3", + "protein_translation": "MSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFFTSCW", + "protein_translation_length": 106, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003675" + ], + [ + "gene_synonym", + "ECK1071" + ], + [ + "gene_synonym", + "EcoGene:EG11118" + ], + [ + "gene_synonym", + "GI:16129049" + ], + [ + "gene_synonym", + "GeneID:945637" + ], + [ + "gene_synonym", + "JW1072" + ], + [ + "gene_synonym", + "NP_415604.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA39" + ], + [ + "gene_synonym", + "b1086" + ], + [ + "gene_synonym", + "rluC" + ], + [ + "gene_synonym", + "yceC" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:948549" + ], + [ + "gene_synonym", + "JW1089" + ], + [ + "gene_synonym", + "NP_415621.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACE7" + ], + [ + "gene_synonym", + "b1103" + ], + [ + "gene_synonym", + "hinT" + ], + [ + "gene_synonym", + "ycfF" + ] + ], + "dna_sequence": "GTGGCAGAAGAAACTATATTCAGCAAAATTATTCGTCGTGAGATCCCCTCCGATATCGTCTACCAGGATGATCTGGTAACGGCGTTTCGCGATATTTCGCCGCAAGCGCCAACGCATATTCTGATCATTCCGAATATCCTCATTCCGACTGTGAACGACGTCTCAGCTGAGCATGAGCAGGCGCTGGGACGCATGATCACCGTAGCGGCAAAAATTGCTGAGCAAGAAGGTATTGCCGAAGATGGCTATCGTCTGATCATGAATACCAACCGCCATGGCGGACAAGAGGTTTACCACATCCATATGCACTTGTTGGGTGGCCGTCCGCTGGGACCAATGCTGGCGCATAAAGGTCTGTAA", + "dna_sequence_length": 360, + "functions": [ + "purine nucleoside phosphoramidase, dadA activator protein" + ], + "id": "CDS_1081", + "location": [ + [ + "NC_000913", + 1161885, + "+", + 360 + ] + ], + "md5": "8c4044a71c97b4a6462c275aedb31ca7", + "parent_gene": "", + "protein_md5": "5ec0a5dd41b1ecfa4c370d803bcc79d4", + 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"gene_synonym", + "EcoGene:EG13431" + ], + [ + "gene_synonym", + "GI:16129068" + ], + [ + "gene_synonym", + "GeneID:948536" + ], + [ + "gene_synonym", + "JW5157" + ], + [ + "gene_synonym", + "NP_415623.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB38" + ], + [ + "gene_synonym", + "b1105" + ], + [ + "gene_synonym", + "lpoB" + ], + [ + "gene_synonym", + "ycfM" + ] + ], + "dna_sequence": 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"MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQPVPTVPSVPTIPQQPGPIEHEDQTAPPAPHIRHYDWNGAMQPMVSKMLGADGVTAGSVLLVDSVNNRTNGSLNAAEATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGTRSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQQ", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003735" + ], + [ + "gene_synonym", + "ECK1092" + ], + [ + "gene_synonym", + "EcoGene:EG13432" + ], + [ + "gene_synonym", + "GI:16129069" + ], + [ + "gene_synonym", + "GeneID:948525" + ], + [ + "gene_synonym", + "JW1092" + ], + [ + "gene_synonym", + "NP_415624.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75948" + ], + [ + "gene_synonym", + "b1106" + ], + [ + "gene_synonym", + "thiK" + ], + [ + "gene_synonym", + "ycfN" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "NP_415626.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8E1" + ], + [ + "gene_synonym", + "b1108" + ], + [ + "gene_synonym", + "ycfP" + ] + ], + "dna_sequence": "ATGATTATCTATTTACACGGTTTTGACTCTAACAGTCCGGGTAACCACGAGAAAGTCTTACAATTGCAGTTTATTGACCCGGATGTACGCTTGATAAGCTACAGTACGCGGCATCCGAAACATGATATGCAGCATCTGCTTAAAGAAGTGGACAAAATGTTGCAACTGAACGTTGACGAGCGTCCGCTAATTTGCGGCGTTGGCTTGGGCGGATACTGGGCGGAACGGATTGGTTTTCTTTGCGACATCCGCCAGGTGATCTTCAACCCTAATTTGTTCCCTTATGAGAACATGGAAGGCAAGATTGATCGCCCGGAAGAGTATGCCGATATTGCCACTAAGTGTGTGACCAACTTCCGTGAGAAGAATCGCGATCGTTGCCTGGTGATTTTGTCGCGTAATGATGAAGCGCTTAACAGCCAGCGGACATCTGAAGAGTTGCATCATTATTACGAGATTGTCTGGGACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAA", + "dna_sequence_length": 543, + "functions": [ + "putative UPF0227 family esterase" + ], + "id": "CDS_1086", + "location": [ + [ + "NC_000913", + 1165143, + "+", + 543 + ] + ], + "md5": "6b8e8e1d149fd2e060fa444603a9b2fd", + "parent_gene": "", + 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1167599, + "+", + 540 + ] + ], + "md5": "639a24cda394f9b129b6b23eb5c8afae", + "parent_gene": "", + "protein_md5": "0bb9fe6df56d7fe4c9a6d6613406f3d5", + "protein_translation": "MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIKETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGALGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRDPGTQIPLDSNGQLILNNKV", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003754" + ], + [ + "gene_synonym", + "ECK1097" + ], + [ + "gene_synonym", + "EcoGene:EG13435" + ], + [ + "gene_synonym", + "GI:90111214" + ], + [ + "gene_synonym", + "GeneID:947425" + ], + [ + "gene_synonym", + "JW5159" + ], + [ + "gene_synonym", + "NP_415629.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75952" + ], + [ + "gene_synonym", + "b1111" + ], + [ + "gene_synonym", + "ycfQ" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW5820" + ], + [ + "gene_synonym", + "NP_415631.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P75954" + ], + [ + "gene_synonym", + "b1113" + ], + [ + "gene_synonym", + "ldtC" + ], + [ + "gene_synonym", + "ycfS" + ] + ], + "dna_sequence": 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"functions": [ + "L,D-transpeptidase linking Lpp to murein" + ], + "id": "CDS_1091", + "location": [ + [ + "NC_000913", + 1170374, + "-", + 963 + ] + ], + "md5": "a7168ca2231d6aafb1ce65ca286e5870", + "parent_gene": "", + "protein_md5": "ada6452fdc3320c50c966f10e7cc237c", + "protein_translation": "MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGLDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNIINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL", + "protein_translation_length": 320, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003763" + ], + [ + "gene_synonym", + "ECK1100" + ], + [ + "gene_synonym", + "EcoGene:EG11619" + ], + [ + "gene_synonym", + "GI:16129077" + ], + [ + "gene_synonym", + "GeneID:945681" + ], + [ + "gene_synonym", + "JW1100" + ], + [ + "gene_synonym", + "NP_415632.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30958" + ], + [ + "gene_synonym", + "b1114" + ], + [ + "gene_synonym", + "mfd" + ] + ], + "dna_sequence": 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"MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESEGRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDTVRNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSMVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIEFAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENAIA", 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"ATGGGACAGAGTAAAAAATTGAATAAACAACCGAGTTCGCTTTCACCGCTGGTGCAATTGGCGGGAATTCGCAAATGCTTTGATGGTAAAGAGGTCATTCCCCAGCTGGATCTGACTATCAACAATGGCGAGTTCCTCACGCTGCTTGGCCCTTCTGGCTGCGGTAAAACAACCGTTCTTCGCCTGATTGCAGGTCTGGAAACTGTTGATTCCGGACGCATCATGCTGGATAACGAGGACATCACCCACGTTCCGGCGGAAAACCGCTATGTGAACACTGTTTTCCAAAGCTACGCACTTTTCCCCCACATGACCGTGTTCGAAAATGTGGCCTTTGGGTTGCGCATGCAAAAAACCCCCGCTGCTGAAATTACGCCCCGCGTGATGGAAGCCCTGCGGATGGTGCAGTTGGAAACCTTCGCTCAACGCAAACCGCATCAGCTCTCTGGTGGTCAACAGCAACGCGTCGCCATTGCTCGCGCGGTGGTTAACAAGCCTCGTCTGTTGTTGCTGGATGAGTCGCTCTCAGCGCTGGATTACAAACTGCGTAAGCAAATGCAGAACGAGCTGAAAGCGTTACAGCGTAAGCTTGGCATTACATTCGTCTTTGTGACTCACGACCAGGAAGAAGCACTCACCATGTCAGACAGGATTGTGGTGATGCGCGATGGTCGCATTGAGCAAGACGGCACGCCGCGTGAAATCTACGAAGAGCCGAAAAACCTGTTTGTTGCCGGCTTCATTGGCGAAATCAATATGTTTAACGCCACTGTCATCGAACGTCTAGACGAGCAGCGCGTACGCGCCAACGTTGAAGGCCGCGAATGTAATATCTACGTTAACTTCGCCGTTGAACCGGGGCAAAAACTGCATGTTCTGCTGCGCCCGGAAGACTTACGTGTTGAAGAGATTAACGACGACAACCACGCTGAAGGGCTGATTGGTTACGTTCGCGAGCGTAACTACAAAGGCATGACGCTGGAGTCGGTTGTTGAACTGGAAAATGGCAAGATGGTGATGGTCAGCGAATTCTTCAATGAAGACGATCCTGACTTTGACCACTCTCTCGACCAAAAAATGGCCATTAATTGGGTAGAAAGCTGGGAGGTCGTACTGGCTGATGAAGAACACAAGTAA", 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"GeneID:946333" + ], + [ + "gene_synonym", + "JW1113" + ], + [ + "gene_synonym", + "NP_415645.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P29745" + ], + [ + "gene_synonym", + "b1127" + ], + [ + "gene_synonym", + "pepT" + ] + ], + "dna_sequence": 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"GeneID:945391" + ], + [ + "gene_synonym", + "JW1114" + ], + [ + "gene_synonym", + "NP_415646.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27431" + ], + [ + "gene_synonym", + "b1128" + ], + [ + "gene_synonym", + "roxA" + ], + [ + "gene_synonym", + "ycfD" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "GeneID:946326" + ], + [ + "gene_synonym", + "JW1115" + ], + [ + "gene_synonym", + "NP_415647.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23837" + ], + [ + "gene_synonym", + "b1129" + ], + [ + "gene_synonym", + "phoQ" + ] + ], + "dna_sequence": 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"MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSIIDMNPSSTLAVFGGSEANLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSAKGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQSPQVQAKVRATLLAGIRAAVLWHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL", + "protein_translation_length": 213, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003815" + ], + [ + "gene_synonym", + "ECK1119" + ], + [ + "gene_synonym", + "EcoGene:EG11344" + ], + [ + "gene_synonym", + "GI:90111218" + ], + [ + "gene_synonym", + "GeneID:945690" + ], + [ + "gene_synonym", + "JW1119" + ], + [ + "gene_synonym", + "NP_415651.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25745" + ], + [ + "gene_synonym", + "asuE" + ], + [ + "gene_synonym", + "b1133" + ], + [ + "gene_synonym", + "mnmA" + ], + [ + "gene_synonym", + "trmU" + ], + [ + "gene_synonym", + "ycfB" + ] + ], + "dna_sequence": 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"ATGCGGCAATTCATAATCTCTGAAAATACCATGCAAAAAACTTCTTTTAGAAATCACCAGGTTAAGCGATTCAGCTCGCAACGTTCTACCAGGCGTAAACCTGAAAACCAGCCCACGCGTGTGATCCTGTTCAATAAACCCTACGATGTTCTTCCGCAGTTCACCGATGAAGCCGGACGCAAAACATTAAAAGAATTCATCCCGGTTCAGGGTGTTTATGCAGCAGGTCGCCTTGACCGCGATAGCGAAGGGTTGCTGGTGCTGACCAATAACGGCGCGTTGCAGGCGCGTTTAACCCAGCCGGGTAAACGCACCGGAAAAATCTATTATGTGCAGGTGGAAGGTATTCCCACACAAGACGCACTTGAAGCCTTGCGCAATGGCGTAACCTTAAATGATGGCCCTACCCTGCCCGCCGGCGCGGAGCTGGTTGACGAACCCGCGTGGTTATGGCCGCGGAATCCACCAATTCGTGAACGCAAAAGTATTCCCACCAGCTGGCTGAAGATCACCTTATATGAAGGACGTAATCGCCAGGTGCGCCGCATGACCGCCCATGTTGGCTTCCCCACGCTGCGACTGATTCGCTATGCGATGGGTGATTACTCTTTGGATAATCTTGCCAATGGTGAATGGCGAGAAGTGACAGATTAA", + "dna_sequence_length": 654, + "functions": [ + "23S rRNA pseudouridine(2457) synthase" + ], + "id": "CDS_1113", + "location": [ + [ + "NC_000913", + 1194951, + "-", + 654 + ] + ], + "md5": "7a932f615f6cf8713455a68da35e646d", + "parent_gene": "", + "protein_md5": "02ae5257b7d6d50c0741e87f2fa8d4cc", + "protein_translation": "MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD", + "protein_translation_length": 217, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0003823" + ], + [ + "gene_synonym", + "ECK1122" + ], + [ + "gene_synonym", + "EcoGene:EG10489" + ], + [ + "gene_synonym", + "GI:16129099" + ], + [ + "gene_synonym", + "GeneID:945702" + ], + [ + "gene_synonym", + "JW1122" + ], + [ + "gene_synonym", + "NP_415654.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08200" + ], + [ + "gene_synonym", + "b1136" + ], + [ + "gene_synonym", + "icd" + ], + [ + "gene_synonym", + "icdA" + ], + [ + "gene_synonym", + "icdE" + ] + ], + "dna_sequence": 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binding protein" + ], + "id": "CDS_1137", + "location": [ + [ + "NC_000913", + 1210346, + "+", + 834 + ] + ], + "md5": "98627fe30a9b0ebe29d1db295097a438", + "parent_gene": "", + "protein_md5": "c5ecccb07fa1d41bf21a63f418aa50e5", + "protein_translation": "MHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVVVYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285040" + ], + [ + "gene_synonym", + "ECK1146" + ], + [ + "gene_synonym", + "EcoGene:EG10009" + ], + [ + "gene_synonym", + "GeneID:4056026" + ], + [ + "gene_synonym", + "JW5173" + ], + [ + "gene_synonym", + "b4519" + ], + [ + "gene_synonym", + "icd" + ], + [ + "gene_synonym", + "icdC" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW5184" + ], + [ + "gene_synonym", + "NP_415709.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76007" + ], + [ + "gene_synonym", + "b1191" + ], + [ + "gene_synonym", + "cvrA" + ], + [ + "gene_synonym", + "ycgO" + ] + ], + "dna_sequence": 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carboxypeptidase", + "LD-carboxypeptidase A" + ], + "id": "CDS_1173", + "location": [ + [ + "NC_000913", + 1243080, + "-", + 915 + ] + ], + "md5": "9c65c2c850d5bebc08046c07cf11faab", + "parent_gene": "", + "protein_md5": "a9a7d65ac76c76eca701a94c40bf1a04", + "protein_translation": "MSLFHLIAPSGYCIKQHAALRGIQRLTDAGHQVNNVEVIARRCERFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLICGHSDFTAIQCGLLAHGNVITFSGPMLVANFGADELNAFTEHHFWLALRNETFTIEWQGEGPTCRAEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYHAGILPRQKAIILGSFSGSTPNDYDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVTLPLGAHAILNNTREGTQLTISGHPVLKM", + "protein_translation_length": 304, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004006" + ], + [ + "gene_synonym", + "ECK1181" + ], + [ + "gene_synonym", + "EcoGene:EG13897" + ], + [ + "gene_synonym", + "GI:90111231" + ], + [ + "gene_synonym", + "GeneID:945655" + ], + [ + "gene_synonym", + "JW5821" + ], + [ + "gene_synonym", + "NP_415711.2" + ], + [ + "gene_synonym", + 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"gene_synonym", + "JW1185" + ], + [ + "gene_synonym", + "NP_415714.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76012" + ], + [ + "gene_synonym", + "b1196" + ], + [ + "gene_synonym", + "ycgY" + ] + ], + "dna_sequence": "GTGATTCAGAAAATAAATATTTTAGACAGTAGCCAGTCAGGCGTTAAAAATGGGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTGAACATTTAGAATTGATCAATCCTTCTGGCAGATTAAGCCAAAATACCCGTTCGGCAATGCTTCAGTTACGCGAAGAGGAATGGTCTGAATTCTTTTTTTGGTTGCTAAATTCTCTGGAGTGTCTGGATTATGTGATTATTAATTTAACTCCAGAAAGCAAAAAAACGTTGATGAGTGAACACCGTAACAATATTCAGGTAGCAATTGATGCTTTATATAGCCAACGTCGGCGTAAATCGCCGGGTGATGAAAGTGAAACACTTACCCGTAGAAATGACGCTATCTTCGGCAACCACGTATGGCAAACATTTGCGCAATACTTCCCGCCAGGACTTGAAAAACCGTCTGTGTAG", + "dna_sequence_length": 441, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_1177", + "location": [ + [ + "NC_000913", + 1245160, + "+", + 441 + ] + ], + "md5": "338f18b610bb359a37f57ff428743a07", + "parent_gene": "", + "protein_md5": "1a7b95cc54c14563386ef591bdbf4c02", + "protein_translation": 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"MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNRGFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLTLEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASSIAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE", + "protein_translation_length": 210, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004029" + ], + [ + "gene_synonym", + "ECK1188" + ], + [ + "gene_synonym", + "EcoGene:EG13901" + ], + [ + "gene_synonym", + "GI:162135900" + ], + [ + "gene_synonym", + "GeneID:945747" + ], + [ + "gene_synonym", + "JW5187" + ], + [ + "gene_synonym", + "NP_415718.6" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76015" + ], + [ + "gene_synonym", + "b1200" + ], + [ + "gene_synonym", + "dhaK" + ], + [ + "gene_synonym", + "dhaK1" + ], + [ + "gene_synonym", + "ptsD" + ], + [ + "gene_synonym", + "ycgT" + ] + ], + "dna_sequence": "ATGAAAAAATTGATCAATGATGTGCAAGACGTACTGGACGAACAACTGGCAGGACTGGCGAAAGCGCATCCATCGCTGACACTGCATCAGGATCCGGTGTATGTCACCCGAGCTGATGCCCCTGTTGCAGGAAAAGTCGCCCTGCTGTCGGGTGGCGGCAGCGGACACGAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCGACGCCCGATAAAATCTTTGAATGCGCCATGCAAGTTGATGGCGGCGAAGGTGTACTGTTGATTATCAAAAATTACACCGGCGATATTCTTAACTTTGAAACAGCGACCGAGTTACTGCACGATAGCGGCGTAAAAGTGACCACTGTGGTCATTGATGACGACGTTGCGGTAAAAGACAGTCTTTATACTGCCGGGCGACGCGGCGTTGCCAACACCGTATTAATTGAAAAACTCGTAGGCGCAGCGGCGGAGCGTGGCGACTCACTGGACGCCTGTGCGGAACTGGGGCGTAAGCTGAATAATCAAGGCCACTCAATAGGTATCGCTCTCGGTGCCTGTACCGTTCCTGCCGCGGGCAAACCTTCTTTTACCCTGGCGGATAATGAGATGGAGTTTGGCGTCGGCATTCATGGTGAGCCGGGTATTGACCGCCGCCCCTTCTCTTCCCTTGATCAAACCGTCGATGAAATGTTCGACACCCTGCTGGTAAATGGCTCATACCATCGCACTTTGCGTTTCTGGGATTATCAACAAGGCAGTTGGCAGGAAGAACAACAAACCAAACAACCGCTCCAGTCTGGCGATCGGGTGATTGCGCTGGTTAACAATCTTGGCGCAACTCCGCTTTCTGAGCTGTACGGCGTCTATAACCGCCTGACCACACGTTGCCAGCAAGCGGGATTGACTATCGAACGTAATTTAATTGGCGCGTACTGCACCTCACTGGATATGACCGGTTTCTCAATCACCTTACTGAAAGTTGATGACGAAACGCTGGCACTCTGGGACGCCCCGGTCCACACCCCGGCCCTTAACTGGGGTAAATAA", 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"GeneID:945743" + ], + [ + "gene_synonym", + "JW5188" + ], + [ + "gene_synonym", + "NP_415719.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76016" + ], + [ + "gene_synonym", + "b1201" + ], + [ + "gene_synonym", + "dhaR" + ], + [ + "gene_synonym", + "ptsD" + ], + [ + "gene_synonym", + "ycgU" + ] + ], + "dna_sequence": 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hydrolase" + ], + "id": "CDS_1185", + "location": [ + [ + "NC_000913", + 1258513, + "-", + 585 + ] + ], + "md5": "f125cd44c2b265e8a6f84b8e59ce19fa", + "parent_gene": "", + "protein_md5": "eba443ca69331a4b5ece478681d63b3a", + "protein_translation": "MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ", + "protein_translation_length": 194, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004049" + ], + [ + "gene_synonym", + "ECK1193" + ], + [ + "gene_synonym", + "EcoGene:EG11533" + ], + [ + "gene_synonym", + "GI:16129168" + ], + [ + "gene_synonym", + "GeneID:945762" + ], + [ + "gene_synonym", + "JW1196" + ], + [ + "gene_synonym", + "NP_415723.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB49" + ], + [ + "gene_synonym", + "b1205" + ], + [ + "gene_synonym", + "ychH" + ] + ], + "dna_sequence": 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"GeneID:945770" + ], + [ + "gene_synonym", + "JW5189" + ], + [ + "gene_synonym", + "NP_415724.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFR2" + ], + [ + "gene_synonym", + "b1206" + ], + [ + "gene_synonym", + "dauA" + ], + [ + "gene_synonym", + "ychM" + ] + ], + "dna_sequence": 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"ASAP:ABE-0004054" + ], + [ + "gene_synonym", + "ECK1195" + ], + [ + "gene_synonym", + "EcoGene:EG10774" + ], + [ + "gene_synonym", + "GI:16129170" + ], + [ + "gene_synonym", + "GeneID:945772" + ], + [ + "gene_synonym", + "JW1198" + ], + [ + "gene_synonym", + "NP_415725.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A717" + ], + [ + "gene_synonym", + "b1207" + ], + [ + "gene_synonym", + "dnaR" + ], + [ + "gene_synonym", + "prs" + ], + [ + "gene_synonym", + "prsA" + ] + ], + "dna_sequence": 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"protein_translation": "MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004099" + ], + [ + "gene_synonym", + "ECK1216" + ], + [ + "gene_synonym", + "EcoGene:EG10646" + ], + [ + "gene_synonym", + "GI:16129185" + ], + [ + "gene_synonym", + "GeneID:945788" + ], + [ + "gene_synonym", + "JW1213" + ], + [ + "gene_synonym", + "NP_415740.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFA2" + ], + [ + "gene_synonym", + "b1222" + ], + [ + "gene_synonym", + "frdR" + ], + [ + "gene_synonym", + "narR" + ], + [ + "gene_synonym", + "narX" + ] + ], + "dna_sequence": "ATGCTTAAACGTTGTCTCTCTCCGCTCACCCTGGTTAATCAGGTTGCGCTTATTGTGTTGCTTTCTACTGCTATTGGACTGGCAGGGATGGCGGTTTCTGGCTGGCTGGTGCAAGGCGTTCAGGGCAGCGCCCATGCGATCAACAAAGCGGGATCGCTGCGCATGCAAAGTTACCGTCTGTTGGCGGCAGTGCCATTAAGCGAGAAAGACAAGCCCTTAATTAAAGAGATGGAACAAACGGCATTTAGCGCCGAGTTGACTCGAGCAGCAGAACGAGACGGACAACTGGCGCAATTACAGGGTTTACAAGATTACTGGCGTAATGAACTGATCCCTGCGCTGATGCGTGCACAAAACCGAGAAACGGTGTCAGCGGATGTCAGCCAGTTTGTTGCCGGGCTTGATCAACTGGTATCTGGTTTTGACCGCACCACGGAAATGCGCATCGAGACAGTGGTACTGGTCCATCGGGTAATGGCGGTATTTATGGCACTTTTACTGGTGTTCACTATTATCTGGTTGCGGGCGCGACTGCTACAACCGTGGCGGCAACTGCTGGCAATGGCGAGTGCCGTCAGTCATCGCGATTTTACCCAACGCGCAAACATCAGCGGGCGCAACGAAATGGCGATGCTTGGAACTGCGTTGAACAATATGTCTGCAGAACTGGCCGAAAGTTATGCCGTACTTGAGCAGCGGGTTCAGGAGAAAACCGCCGGGCTGGAGCATAAAAATCAGATCCTCTCTTTTTTATGGCAGGCTAACCGCCGTTTGCATTCCCGCGCCCCGCTGTGTGAACGCCTGTCACCTGTACTCAACGGCTTACAGAATTTAACCCTGCTACGTGATATCGAATTGCGGGTGTATGACACTGATGATGAAGAGAATCATCAGGAGTTTACCTGCCAGCCAGATATGACTTGTGATGATAAAGGCTGCCAGCTCTGCCCGCGCGGCGTATTACCCGTTGGTGATCGCGGCACGACCCTGAAGTGGCGGCTGGCTGACTCTCATACGCAGTACGGTATTTTGCTGGCGACCCTGCCGCAGGGGCGTCATCTTAGCCATGATCAACAACAACTGGTGGATACCCTGGTTGAACAACTCACCGCCACGCTGGCGCTGGATCGCCATCAGGAACGTCAGCAACAGTTGATCGTGATGGAAGAGCGTGCCACCATTGCGCGCGAACTGCATGATTCTATTGCCCAATCTCTCTCTTGCATGAAGATGCAGGTGAGTTGTTTACAGATGCAGGGCGATGCGCTGCCAGAAAGCAGCCGCGAACTGTTAAGTCAGATCCGTAACGAACTGAATGCATCCTGGGCGCAGTTGCGTGAATTGCTCACCACATTCCGCTTGCAGCTCACCGAGCCTGGATTACGTCCGGCGCTGGAGGCGAGTTGCGAAGAGTACAGCGCCAAATTTGGCTTCCCGGTGAAGCTGGATTATCAATTGCCGCCTCGCCTGGTGCCTTCGCATCAGGCAATCCACTTGTTGCAAATTGCCCGTGAGGCATTAAGTAACGCCCTCAAACATTCGCAAGCGAGTGAAGTCGTGGTGACGGTGGCGCAAAACGATAATCAGGTCAAACTGACCGTCCAGGATAACGGCTGCGGCGTGCCTGAAAATGCCATCCGCAGCAATCACTACGGCATGATAATAATGCGCGATCGTGCGCAAAGTTTACGAGGCGATTGCCGCGTCCGCCGTCGTGAATCAGGTGGCACCGAAGTGGTGGTCACCTTTATTCCCGAAAAAACTTTCACAGACGTCCAAGGAGATACCCATGAGTAA", 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"type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004111" + ], + [ + "gene_synonym", + "ECK1217" + ], + [ + "gene_synonym", + "EcoGene:EG10642" + ], + [ + "gene_synonym", + "GI:16129186" + ], + [ + "gene_synonym", + "GeneID:945783" + ], + [ + "gene_synonym", + "JW1214" + ], + [ + "gene_synonym", + "NP_415741.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P10903" + ], + [ + "gene_synonym", + "b1223" + ], + [ + "gene_synonym", + "narK" + ] + ], + "dna_sequence": 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+ "gene_synonym", + "GI:16129187" + ], + [ + "gene_synonym", + "GeneID:945782" + ], + [ + "gene_synonym", + "JW1215" + ], + [ + "gene_synonym", + "NP_415742.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09152" + ], + [ + "gene_synonym", + "b1224" + ], + [ + "gene_synonym", + "chlC" + ], + [ + "gene_synonym", + "narC" + ], + [ + "gene_synonym", + "narG" + ] + ], + "dna_sequence": 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"MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWAEQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGHLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYERFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKSNGNQEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIEVFNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTHMIGGYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGNDQVQESVK", + "protein_translation_length": 1247, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004121" + ], + [ + "gene_synonym", + "ECK1219" + ], + [ + "gene_synonym", + "EcoGene:EG10639" + ], + [ + "gene_synonym", + "GI:16129188" + ], + [ + "gene_synonym", + "GeneID:945780" + ], + [ + "gene_synonym", + "JW1216" + ], + [ + "gene_synonym", + "NP_415743.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11349" + ], + [ + "gene_synonym", + "b1225" + ], + [ + "gene_synonym", + "chlC" + ], + [ + "gene_synonym", + "narH" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P30850" + ], + [ + "gene_synonym", + "b1286" + ], + [ + "gene_synonym", + "rnb" + ] + ], + "dna_sequence": 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"NP_415810.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47622" + ], + [ + "gene_synonym", + "b1294" + ], + [ + "gene_synonym", + "sapA" + ] + ], + "dna_sequence": 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"protein_translation": "MNHDIPLKYFDIADEYATECAEPVAEAERTPLAHYFQLLLTRLMNNEEISEEAQHEMAAEAGINPVRIDEIAEFLNQWGNE", + "protein_translation_length": 81, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004362" + ], + [ + "gene_synonym", + "ECK1291" + ], + [ + "gene_synonym", + "EcoGene:EG13907" + ], + [ + "gene_synonym", + "GI:90111243" + ], + [ + "gene_synonym", + "GeneID:946287" + ], + [ + "gene_synonym", + "JW1289" + ], + [ + "gene_synonym", + "NP_415812.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76037" + ], + [ + "gene_synonym", + "b1296" + ], + [ + "gene_synonym", + "puuP" + ], + [ + "gene_synonym", + "ycjJ" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:90111244" + ], + [ + "gene_synonym", + "GeneID:946202" + ], + [ + "gene_synonym", + "JW5201" + ], + [ + "gene_synonym", + "NP_415813.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P78061" + ], + [ + "gene_synonym", + "b1297" + ], + [ + "gene_synonym", + "puuA" + ], + [ + "gene_synonym", + "ycjK" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW1309" + ], + [ + "gene_synonym", + "NP_415832.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77154" + ], + [ + "gene_synonym", + "b1316" + ], + [ + "gene_synonym", + "ycjT" + ] + ], + "dna_sequence": 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"GI:16129278" + ], + [ + "gene_synonym", + "GeneID:945891" + ], + [ + "gene_synonym", + "JW1310" + ], + [ + "gene_synonym", + "NP_415833.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77366" + ], + [ + "gene_synonym", + "b1317" + ], + [ + "gene_synonym", + "ycjU" + ] + ], + "dna_sequence": "ATGAAACTGCAAGGGGTAATTTTCGATCTGGATGGTGTAATCACCGATACCGCGCATCTGCATTTCCAGGCGTGGCAGCAGATTGCCGCTGAAATTGGCATCAGCATTGATGCGCAGTTTAACGAATCCCTAAAAGGGATCAGCCGCGATGAGTCTCTGCGGCGCATTCTGCAACACGGGGGCAAAGAGGGCGACTTTAACTCGCAGGAGAGGGCGCAACTGGCGTATCGCAAAAATCTGCTCTATGTCCACTCACTACGCGAGTTGACGGTCAACGCTGTTCTACCCGGCATTCGCTCTTTGCTGGCAGATCTCCGTGCACAGCAGATCTCGGTTGGGCTGGCTTCTGTCTCCCTGAATGCGCCGACGATTTTAGCGGCGCTGGAGCTGCGCGAGTTTTTCACCTTCTGCGCGGATGCTTCCCAACTTAAAAACTCGAAACCGGACCCGGAAATCTTTCTCGCCGCCTGTGCAGGGCTGGGCGTGCCGCCGCAGGCATGTATCGGCATTGAAGATGCGCAGGCGGGCATTGACGCCATTAACGCCAGCGGTATGCGCTCGGTGGGGATCGGCGCGGGCTTAACCGGGGCGCAATTACTGTTGCCTTCAACGGAATCACTCACCTGGCCGCGGTTATCGGCCTTCTGGCAAAACGTATAG", + "dna_sequence_length": 660, + "functions": [ + "beta-phosphoglucomutase" + ], + "id": "CDS_1302", + "location": [ + [ + "NC_000913", + 1380148, + "+", + 660 + ] + ], + "md5": "8e8a772186db96df93667c15ff130490", + "parent_gene": "", + "protein_md5": "bf9e983c20f62225bfb3640f02791fad", + "protein_translation": "MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004422" + ], + [ + "gene_synonym", + "ASAP:ABE-0285045" + ], + [ + "gene_synonym", + "ECK1313" + ], + [ + "gene_synonym", + "EcoGene:EG13919" + ], + [ + "gene_synonym", + "GeneID:4306141" + ], + [ + "gene_synonym", + "JW1311" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77481" + ], + [ + "gene_synonym", + "b4524" + ], + [ + "gene_synonym", + "ycjV" + ], + [ + "gene_synonym", 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"JW1312" + ], + [ + "gene_synonym", + "NP_415835.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76045" + ], + [ + "gene_synonym", + "b1319" + ], + [ + "gene_synonym", + "ompG" + ] + ], + "dna_sequence": 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"CDS_1304", + "location": [ + [ + "NC_000913", + 1381947, + "+", + 906 + ] + ], + "md5": "aa47fc2100508b6da932d8fbe4d50764", + "parent_gene": "", + "protein_md5": "eea0ea7000d510eae36efc9635e61a16", + "protein_translation": "MKKLLPCTALVMCAGMACAQAEERNDWHFNIGAMYEIENVEGYGEDMDGLAEPSVYFNAANGPWRIALAYYQEGPVDYSAGKRGTWFDRPELEVHYQFLENDDFSFGLTGGFRNYGYHYVDEPGKDTANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFANDLNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSNWDWQDDIEREGHDFNRVGLFYGYDFQNGLSVSLEYAFEWQDHDEGDSDKFHYAGVGVNYSF", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004428" + ], + [ + "gene_synonym", + "ECK1316" + ], + [ + "gene_synonym", + "EcoGene:EG13920" + ], + [ + "gene_synonym", + "GI:16129281" + ], + [ + "gene_synonym", + "GeneID:945875" + ], + [ + "gene_synonym", + "JW1313" + ], + [ + "gene_synonym", + "NP_415836.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77615" + ], + [ + "gene_synonym", + "b1320" 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family protein" + ], + "id": "CDS_1314", + "location": [ + [ + "NC_000913", + 1391853, + "-", + 921 + ] + ], + "md5": "5d0a829d9b08dcec80f04a135ebbea47", + "parent_gene": "", + "protein_md5": "222f6dd5ad5b5e8fa96c4f4148da425e", + "protein_translation": "MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEPRQLENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSIFRNGWENNVKSIDALPYVEAGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVYLTQPTQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAPFFEETL", + "protein_translation_length": 306, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004457" + ], + [ + "gene_synonym", + "ECK1325" + ], + [ + "gene_synonym", + "EcoGene:EG13923" + ], + [ + "gene_synonym", + "GI:16129289" + ], + [ + "gene_synonym", + "GeneID:945930" + ], + [ + "gene_synonym", + "JW1321" + ], + [ + "gene_synonym", + "NP_415844.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77333" + 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"gene_synonym", + "NP_415870.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38392" + ], + [ + "gene_synonym", + "b1353" + ], + [ + "gene_synonym", + "git" + ], + [ + "gene_synonym", + "sieB" + ] + ], + "dna_sequence": "ATGTTGGATGTATTTACTCCATTGTTGAAACTTTTTGCTAACGAGCCACTCGAAAGACTTATGTATACGATTATCATTTTTGGTCTCACTCTCTGGCTGATACCGAAAGAGTTTACTGTCGCATTCAATGCTTATACTGAAATACCTTGGCTCTTTCAGATTATCGTTTTTGCCTTTTCTTTCGTGGTCGCCATTTCCTTCTCAAGATTGCGAGCACATATTCAAAAGCATTATTCATTACTACCAGAGCAACGAGTATTGCTTCGTTTATCTGAGAAAGAAATCGCTGTATTTAAAGATTTCCTTAAAACAGGAAATCTTATTATCACTTCTCCTTGCCGTAACCCGGTTATGAAAAAATTAGAACGGAAGGGCATCATTCAACATCAGAGTGATAGCGCAAACTGTTCTTATTATCTCGTCACCGAAAAATACTCCCATTTTATGAAGTTATTCTGGAACAGCAGGAGTAGACGTTTTAATCGTTAG", + "dna_sequence_length": 489, + "functions": [ + "phage superinfection exclusion protein, Rac prophage" + ], + "id": "CDS_1341", + "location": [ + [ + "NC_000913", + 1418671, + "+", + 489 + ] + ], + "md5": "30894006c1068d1b1450de663b0fd743", + "parent_gene": "", + "protein_md5": 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1445880, + "+", + 327 + ] + ], + "md5": "d367b0ea126ad1f85902aebf2c8df23c", + "parent_gene": "", + "protein_md5": "e17b93cceda521326f1ff88abfa8ce51", + "protein_translation": "MKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVALKTDAETEKLVADINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGINGKWVRKF", + "protein_translation_length": 108, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004630" + ], + [ + "gene_synonym", + "ECK1381" + ], + [ + "gene_synonym", + "EcoGene:EG13422" + ], + [ + "gene_synonym", + "GI:16129345" + ], + [ + "gene_synonym", + "GeneID:945941" + ], + [ + "gene_synonym", + "JW1379" + ], + [ + "gene_synonym", + "NP_415902.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47129" + ], + [ + "gene_synonym", + "b1384" + ], + [ + "gene_synonym", + "feaR" + ], + [ + "gene_synonym", + "maoB" + ], + [ + "gene_synonym", + "maoR" + ], + [ + "gene_synonym", + "maoX" + ], + [ + "gene_synonym", + "ydbM" + ] + ], + "dna_sequence": 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"gene_synonym", + "b1385" + ], + [ + "gene_synonym", + "feaB" + ], + [ + "gene_synonym", + "padA" + ], + [ + "gene_synonym", + "ydbG" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG13140" + ], + [ + "gene_synonym", + "GI:162135920" + ], + [ + "gene_synonym", + "GeneID:945939" + ], + [ + "gene_synonym", + "JW1381" + ], + [ + "gene_synonym", + "NP_415904.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46883" + ], + [ + "gene_synonym", + "b1386" + ], + [ + "gene_synonym", + "maoA" + ], + [ + "gene_synonym", + "tynA" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW1383" + ], + [ + "gene_synonym", + "NP_415906.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76077" + ], + [ + "gene_synonym", + "b1388" + ], + [ + "gene_synonym", + "paaA" + ], + [ + "gene_synonym", + "ydbO" + ] + ], + "dna_sequence": 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1,2-phenylacetyl-CoA epoxidase subunit" + ], + "id": "CDS_1376", + "location": [ + [ + "NC_000913", + 1453927, + "+", + 930 + ] + ], + "md5": "75ba47687840359c3572da28671e5da6", + "parent_gene": "", + "protein_md5": "a98a5e41f3db9b4d8241ad4b00886036", + "protein_translation": "MTQEERFEQRIAQETAIEPQDWMPDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRAPTLRRKAILLAKVQDEAGHGLYLYSAAETLGCAREDIYQKMLDGRMKYSSIFNYPTLSWADIGVIGWLVDGAAIVNQVALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQGSEAQKQMLQDAINRFWWPALMMFGPNDDNSPNSARSLTWKIKRFTNDELRQRFVDNTVPQVEMLGMTVPDPDLHFDTESGHYRFGEIDWQEFNEVINGRGICNQERLDAKRKAWEEGTWVREAALAHAQKQHARKVA", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004651" + ], + [ + "gene_synonym", + "ECK1386" + ], + [ + "gene_synonym", + "EcoGene:EG14299" + ], + [ + "gene_synonym", + "GI:16129350" + ], + [ + "gene_synonym", + "GeneID:947595" + ], + [ + "gene_synonym", + "JW1384" + ], + [ + "gene_synonym", + "NP_415907.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76078" + ], + [ + "gene_synonym", + "b1389" + ], + [ + "gene_synonym", + "paaB" + ], + [ + "gene_synonym", + "ynbF" + ] + ], + "dna_sequence": "ATGAGTAATGTTTACTGGCCGTTATACGAAGTTTTCGTGCGTGGCAAACAGGGCTTATCACACCGCCATGTTGGCAGTTTACATGCTGCCGATGAGCGGATGGCACTGGAAAATGCCCGTGATGCTTACACCCGTCGTAGCGAAGGATGTTCAATTTGGGTGGTGAAGGCGAGTGAAATTGTTGCCTCGCAACCGGAAGAACGCGGTGAATTTTTTGATCCGGCTGAAAGCAAGGTCTATCGCCATCCAACGTTTTACACCATCCCTGATGGCATTGAGCACATGTGA", + "dna_sequence_length": 288, + "functions": [ + "putative ring 1,2-phenylacetyl-CoA epoxidase subunit" + ], + "id": "CDS_1377", + "location": [ + [ + "NC_000913", + 1454868, + "+", + 288 + ] + ], + "md5": "f751cd33d0606976eb0b27e371dd3d7d", + "parent_gene": "", + "protein_md5": "c46fa3a8e8b8da6113ee7ab3c800f68d", + "protein_translation": "MSNVYWPLYEVFVRGKQGLSHRHVGSLHAADERMALENARDAYTRRSEGCSIWVVKASEIVASQPEERGEFFDPAESKVYRHPTFYTIPDGIEHM", + "protein_translation_length": 95, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004653" + ], + [ + "gene_synonym", + "ECK1387" + ], + [ + "gene_synonym", + "EcoGene:EG13737" + ], + [ + "gene_synonym", + "GI:16129351" + ], + [ + "gene_synonym", + "GeneID:945956" + ], + [ + "gene_synonym", + "JW1385" + ], + [ + "gene_synonym", + "NP_415908.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76079" + ], + [ + "gene_synonym", + "b1390" + ], + [ + "gene_synonym", + "paaC" + ], + [ + "gene_synonym", + "ydbP" + ] + ], + "dna_sequence": "ATGAATCAGTTAACGGCTTACACCTTGCGCCTGGGCGATAACTGCCTGGTGCTCTCCCAGCGGTTGGGTGAATGGTGCGGTCACGCACCGGAACTGGAAATCGATCTCGCACTGGCAAACATTGGCCTCGATTTATTAGGTCAGGCACGCAACTTCTTATCGTATGCCGCTGAATTAGCGGGAGAAGGCGATGAAGATACCCTGGCCTTCACCCGAGACGAGCGCCAGTTCAGCAACTTATTGTTGGTTGAACAACCAAACGGCAATTTTGCCGACACCATTGCACGCCAGTATTTCATCGATGCATGGCATGTGGCGCTCTTTACCCGTCTGATGGAAAGCCGTGATCCGCAACTGGCGGCGATTTCTGCCAAAGCAATTAAAGAAGCGCGCTATCACCTGCGTTTTAGTCGTGGCTGGCTGGAGCGACTGGGCAATGGTACTGACGTATCAGGGCAAAAGATGCAGCAGGCCATCAACAAGTTGTGGCGTTTTACCGCCGAACTGTTCGATGCCGACGAGATTGATATTGCACTGAGTGAAGAGGGTATTGCGGTTGATCCACGCACTTTACGCGCAGCGTGGGAAGCCGAAGTTTTTGCCGGGATCAACGAAGCCACATTGAACGTACCGCAAGAGCAGGCGTATCGCACTGGCGGTAAAAAAGGACTGCATACCGAACACCTTGGACCCATGCTGGCAGAAATGCAGTATCTCCAGCGTGTCTTGCCCGGTCAGCAATGGTAA", + "dna_sequence_length": 747, + "functions": [ + "ring 1,2-phenylacetyl-CoA epoxidase subunit" + ], + "id": "CDS_1378", + "location": [ + [ + "NC_000913", + 1455164, + "+", + 747 + ] + ], + "md5": "1e7f96f141b71f3a1d5a79eec1969aa4", + "parent_gene": 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"GeneID:946011" + ], + [ + "gene_synonym", + "JW1388" + ], + [ + "gene_synonym", + "NP_415911.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76082" + ], + [ + "gene_synonym", + "b1393" + ], + [ + "gene_synonym", + "paaF" + ], + [ + "gene_synonym", + "ydbR" + ] + ], + "dna_sequence": 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"ATGCAAAGGAAAACTCTATTGTCGGCCTGTATTGCATTAGCTCTGAGTGGTCAGGGTTGGGCGGCAGATATCACAGAGGTAGAAACCACCACAGGTGAAAAGAAAAATACCAATGTGACTTGTCCGGCAGACCCAGGAAAACTCAGTCCGGAAGAGCTTAAACGCTTACCCTCTGAATGCTCTCCTTTAGTCGAACAAAACCTGATGCCATGGCTTTCCACAGGCGCTGCTGCGTTAATCACGGCCTTAGCCGTAGTGGAACTAAACGACGATGATGATCATCATCATCGCAACAATTCTCCACTCCCACCGACACCCCCTGATGATGAATCAGACGACACTCCAGTTCCCCCAACTCCTGGCGGAGATGAGATAATACCGGACGATCCGGATGATACGCCTACACCTCCCAAACCGGTTTCGTTTAATAATGACGTTATTCTCGATAAAACAGAAAAAACGTTAACTATTCGCGATTCAGTTTTTACTTATACCGAGAATGCTGACGGGACTATATCTCTGCAAGATAGCAATGGTCGTAAGGCAACGATTAATCTTTGGCAGATTGATGAAGCGAATAACACTGTTGCCCTTGAAGGGGTGAGCGCAGATGGCGCAACGAAGTGGCAATATAATCACAACGGTGAGCTTGTTATTACGGGTGATAATGCCACAGTAAACAACAATGGCAAAACCACCGTTGACGGTAAAGATTCCACCGGTACGGAAATCAACGGTAATAACGGGAAAGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGGTTGACGGCGACCAGGCGGTTGTTAACAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCACCGTTGACGGCAAGGATTCCACCGGTACGGAAATTGCTGGCAATAACGGGAAGGTGATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGATATCACCGGCGACAGCGCAACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATCGGTATCCAGATTGACGGCGACCAGGCCATCGTCAATAACGAAGGCGAGAGCACTATCACCAATGGCGGCACCGGCACTCAGATCAACGGTAACGACGCCACCGCGAATAACAGTGGAAAAACCACTGTTGATGGAAAAGATTCCACGGGTACCAAAATCGCGGGCAATATCGGCATTGTAAATCTGGATGGTAGCCTGACTGTTACAGGCGGTGCGCATGGTGTTGAGAACATTGGTGACAACGGCACGGTTAACAACAAAGGAGATATTGTTGTTTCCGATACTGGATCGATTGGCGTGCTCATCAACGGTGAGGGGGCAACAGTATCCAATACGGGTGATGTTAACGTTAGCAATGAAGCGACAGGGTTCAGCATCACAACCAACAGTGGGAAGGTTTCGCTGGCAGGCAGTATGCAGGTTGGCGATTTCTCGACCGGGGTAGATCTTAATGGCAACAATAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGATAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAGTGAGGTTACTTCTCGTCAGAGTAATTTATTTGATGGCAGCGCAGAGAAAACGTCAGGTCTGGTTGTGATTGGCGATGGCAATACCGTTAATATGAATGGTGGACTTGAACTGATTGGAGAGAAAAACGCGCTTGCAGATGGGTCGCAGGTTACTTCCTTGCGCACAGGATATAGTTATACCAGCGTTATTGTCGTTAGTGGTGAGTCGTCGGTATATCTGAATGGAGATACGACAATCAGCGGAGAATTCCCTCTGGGGTTTGCCGGGGTTATTCGGGTACAGGATAAAGCTTTGCTGGAAATTGGCAGTGGCGCTACGCTAACAATGCAGGATATTGACAGTTTTGAACATCATGGGACAAGAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAACAGGTATAAATAGTGGCACGATCTCGTTATTACAAAATGGTAAAGATCCGGCACCGTCTCCCATTGTTTTACTGGCTACTAACGGAGGGAGCGCCACTAATGCAGGTACGATCACAGGTAAAGTGACGGAACAACATAGCGTATTTAACAAGTATTCAACGGGCACATCGAATTCATTTATTTTTAATAACGATGTCAGTAGCATAACAGGGTTAGTCGCTCAATCGAATAGCACAATTATCAATACTGACAGCGGCATCATTGATTTGTATGGTCGTGGTAGTGTCGGCATGCTTGCTATAGCAGATTCAACAGCAGAAAATCAGGGTAAAATTACACTGGATTCTATGTGGGTAGATGCAAATGACACTACCGCAATGCGAGATATAGCTAGCAACAGCGCCATTGACTTCGGTACAGGTGTGGGAGTTGGTACTGATAGTTATAGTGGTGCAGGGAAAAATGCAACAGCAATTAACCAATTGGGCGGTGTTATAACTATTTATAACGCCGGCGCAGGTATGGCGGCCTATGGCGCCAGCAATACAGTTATTAACCAGGGGACGATTAACCTCGAAAAAAATGGTAATTATGACGATAGTCTGGCAGCAAATACTCTGGTAGGGATGGCTGTTTATGAGCATGGTACTGCTATCAACGACCAGACGGGTGTTATCAATATCAATGTTGGTACTGGTCAGGCGTTTTATAACGATGGCACAGGAACAATTGTTAACTATGGTACAATCTGCACTTTCGGCGTGTGCCAATCGGGGAATGAGTACAATAATACAGATGATTTCACCTCACTGATCTATACCGGTGGCGATACGATTACACGAAGCGGAGAAACTGTAACGCTAAATAAATCTGCTGCTGTGACTGATAAGCTGGCTGGGAATGTTGTTAATAGCGGAACGCTTTCCGGTGATCAAATTACGGTATCAAGCGGTCTTCTGGAAAATACCAGCGGTGGCATCATCAATAACTTAGTAAAACTTGACAAGGGTGCCGTCATTAAAAATGCCGGGGTGATGACGAATAACGTCGATGTTAGCGGTGGAATCCTCAATAATGCCGGAGAAATGACTGCGCAAATTACCATGAATGCTGGTGCTGATAGTTCGTTAGTGAACAACACCGGAACCATCAATAAAATCGTGCAGAACGCGGGGGTATTCAATAATAGTGGCAGTGTAACAGGGCGGATGATGTCGGCTGGCGGGGTCTTTAATAATCAAACTGACGGGGCGATTATGAGAGGTGCTGCGCTGACAGGTACTGCAGTGGCAAATAACGAAGGAACCTGGAACCTCGGAAGTAGTAGTGAGGGTAACAACACCGGGATGCTGGAAGTTAATAATAATTCAGCTTTCAATAACCGCGGCGAGTTTATTCTTGATAACGACAAGAATGCTGTGCACATCAACCAGTCCGGTACGCTTTATAATACCGGTCACATGAACATCAGTAATTCTTCCCACAACGGAGCCGTTAATATGTGGGGCGGAAATGGTCGTTTTATCAATGACGGAACGATTGATGTTTCTGCGAAGTCACTGGTAGTCAGCGCTAATAATGCCGGCGATCAGAATGCCTTCTTCTGGAACCAGGATAACGGGGTCATCAACTTCGATCACGACAGCGCCAGTGCCGTGAAAGTCACCCACAGCAACTTTATTGCCCAGAATGACGGCATCATGAACATCAGCGGCACCGGTGCTGTGGCTATGGAAGGTGATAAGAACGCGCAGCTGGTTAACAATGGCACCATCAACCTCGGTACCGCAGGCACTACTGACACGGGTATGATCGGTATGCAACTCGATGCCAACGCCACGGCGGATGCGGTAATCGAAAACAACGGCACCATCAATATCTTCGCCAATGACTCGTTTGCATTTAGCGTACTGGGTACAGTAGGTCATGTGGTTAACAACGGCACGGTGGTGATTGCCGATGGGGTTACGGGTTCTGGACTGATCAAGCAGGGCGACAGCATCAATGTTGAAGGTATGAACGGTAACAACGGTAATAGCAGCGAAGTGCATTATGGCGACTATACGTTGCCGGATGTGCCGAAGCCCAATACGGTTAGTGTAACGTCGGGAAGTGATGAGGCTGGTGGCAGCATGAACAACCTCAACGGCTATGTCGTCGGTACCAACGTTAACGGCAGCGCCGGGAAGCTGAAGGTTAACAATGCCAGCATGAACGGCGTGGAGATTAACACGGGCTTTACCGCTGGTACGGCAGACACCACTGTGAGTTTTGATAACGTAGTGGAAGGTAGCAACCTGACCGACGCTGACGCCATCACCTCAACGTCCGTGGTATGGACTGCCAAAGGCAGCACCGATGCCAGCGGTAACGTTGACGTCACCATGAGCAAAAATGCCTACACCGATGTGGCAACAGATGCCTCGGTGAATGACATCGCGAAAGCACTGGATGCGGGTTACACCAACAACGAACTGTTTACCAGCCTGAACGTCGGCACGACTGCTGAACTGAACAGTGCTCTGAAACAGGTCAGCGGTAGCCAGGCGACCACGGTATTCCGCGAAGCGCGCGTGTTAAGCAACCGCTTTAGTATGCTGGCAGATGCCGCGCCGAAAGTGGGTAACGGTCTGGCGTTCAACGTTGTCGCGAAAGGCGATCCGCGTGCCGAGTTAGGTAATAATACCGAATACGACATGCTGGCATTGCGTAAAACTATCGACCTGAGCGAAAGCCAGACGATGAGTCTGGAGTACGGTATCGCTCGTCTCGATGGTGATGGTGCGCAGAAAGCGGGTGATAATGGCGTTACAGGCGGTTATAGCCAGTTTTTTGGCCTGAAACATCAGATGTCGTTCGATAACGGCATGAACTGGAATAACGCCTTGCGTTACGACGTTCACAACCTTGACAGCAGCCGCTCGATTGCATTTGGCAACACGAACAAAACGGCTGATACCGACGTGAAACAGCAGTACCTGGAGTTCCGCAGCGAAGGGGCGAAGACTTTCGAACCGAGCGAAGGACTGAAGGTTACGCCATATGCGGGTGTAAAACTGCGTCACACACTGGAAGGTGGCTATCAGGAGCGCAATGCCGGAGACTTTAACCTGAATATGAACAGTGGCAGCGAAACGGCGGTGGACAGCATCGTCGGGCTGAAACTGGACTACGCAGGTAAAGACGGCTGGAGCGCTAGCGCTACGCTGGAAGGCGGGCCGAACCTGAGCTACGCGAAGAGCCAGCGTACGGCAAGCCTGGCAGGCGCAGGCAGTCAGCACTTTAACGTCGATGACGGTCAGAAGGGCGGCGGCATCAATAGCCTGACAAGCGTCGGCGTGAAGTACAGCAGCAAAGAAAGTTCGCTGAATCTGGATGCGTACAACTGGAAAGAGGATGGCATCAGCGATAAAGGCGTGATGCTGAACTTCAAGAAAACGTTCTAA", 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"MQRKTLLSACIALALSGQGWAADITEVETTTGEKKNTNVTCPADPGKLSPEELKRLPSECSPLVEQNLMPWLSTGAAALITALAVVELNDDDDHHHRNNSPLPPTPPDDESDDTPVPPTPGGDEIIPDDPDDTPTPPKPVSFNNDVILDKTEKTLTIRDSVFTYTENADGTISLQDSNGRKATINLWQIDEANNTVALEGVSADGATKWQYNHNGELVITGDNATVNNNGKTTVDGKDSTGTEINGNNGKVIQDGDLDVSGGGHGIDITGDSATVDNKGTMTVTDPESMGIQIDGDKAIVNNEGESTITNGGTGTQINGDDATANNNGKTTVDGKDSTGTEINGNNGKVIQDGDLDVSGGGHGIDITGDSATVDNKGTMTVTDPESIGIQVDGDQAVVNNEGESAITNGGTGTQINGDDATANNNGKTTVDGKDSTGTEIAGNNGKVIQDGDLDVSGGGHGIDITGDSATVDNKGTMTVTDPESIGIQIDGDQAIVNNEGESTITNGGTGTQINGNDATANNSGKTTVDGKDSTGTKIAGNIGIVNLDGSLTVTGGAHGVENIGDNGTVNNKGDIVVSDTGSIGVLINGEGATVSNTGDVNVSNEATGFSITTNSGKVSLAGSMQVGDFSTGVDLNGNNNSVTLAAKDLKVVGQKATGINVSGDANTVNITGNVLVDKDKTADNAAEYFFDPSVGINVYGSDNNVTLDGKLTVVSDSEVTSRQSNLFDGSAEKTSGLVVIGDGNTVNMNGGLELIGEKNALADGSQVTSLRTGYSYTSVIVVSGESSVYLNGDTTISGEFPLGFAGVIRVQDKALLEIGSGATLTMQDIDSFEHHGTRTPELTYADSGAKIVNKGTVEIQNLGFAFVTGENTTGINSGTISLLQNGKDPAPSPIVLLATNGGSATNAGTITGKVTEQHSVFNKYSTGTSNSFIFNNDVSSITGLVAQSNSTIINTDSGIIDLYGRGSVGMLAIADSTAENQGKITLDSMWVDANDTTAMRDIASNSAIDFGTGVGVGTDSYSGAGKNATAINQLGGVITIYNAGAGMAAYGASNTVINQGTINLEKNGNYDDSLAANTLVGMAVYEHGTAINDQTGVININVGTGQAFYNDGTGTIVNYGTICTFGVCQSGNEYNNTDDFTSLIYTGGDTITRSGETVTLNKSAAVTDKLAGNVVNSGTLSGDQITVSSGLLENTSGGIINNLVKLDKGAVIKNAGVMTNNVDVSGGILNNAGEMTAQITMNAGADSSLVNNTGTINKIVQNAGVFNNSGSVTGRMMSAGGVFNNQTDGAIMRGAALTGTAVANNEGTWNLGSSSEGNNTGMLEVNNNSAFNNRGEFILDNDKNAVHINQSGTLYNTGHMNISNSSHNGAVNMWGGNGRFINDGTIDVSAKSLVVSANNAGDQNAFFWNQDNGVINFDHDSASAVKVTHSNFIAQNDGIMNISGTGAVAMEGDKNAQLVNNGTINLGTAGTTDTGMIGMQLDANATADAVIENNGTINIFANDSFAFSVLGTVGHVVNNGTVVIADGVTGSGLIKQGDSINVEGMNGNNGNSSEVHYGDYTLPDVPKPNTVSVTSGSDEAGGSMNNLNGYVVGTNVNGSAGKLKVNNASMNGVEINTGFTAGTADTTVSFDNVVEGSNLTDADAITSTSVVWTAKGSTDASGNVDVTMSKNAYTDVATDASVNDIAKALDAGYTNNELFTSLNVGTTAELNSALKQVSGSQATTVFREARVLSNRFSMLADAAPKVGNGLAFNVVAKGDPRAELGNNTEYDMLALRKTIDLSESQTMSLEYGIARLDGDGAQKAGDNGVTGGYSQFFGLKHQMSFDNGMNWNNALRYDVHNLDSSRSIAFGNTNKTADTDVKQQYLEFRSEGAKTFEPSEGLKVTPYAGVKLRHTLEGGYQERNAGDFNLNMNSGSETAVDSIVGLKLDYAGKDGWSASATLEGGPNLSYAKSQRTASLAGAGSQHFNVDDGQKGGGINSLTSVGVKYSSKESSLNLDAYNWKEDGISDKGVMLNFKKTF", 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"gene_synonym", + "EcoGene:EG40009" + ], + [ + "gene_synonym", + "GI:16129365" + ], + [ + "gene_synonym", + "GeneID:945968" + ], + [ + "gene_synonym", + "NP_415922.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF89" + ], + [ + "gene_synonym", + "b1404" + ], + [ + "gene_synonym", + "insI1" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW1403" + ], + [ + "gene_synonym", + "NP_415924.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25906" + ], + [ + "gene_synonym", + "b1406" + ], + [ + "gene_synonym", + "ydbC" + ] + ], + "dna_sequence": 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+ "NC_000913", + 1474221, + "+", + 861 + ] + ], + "md5": "f79cb691e2c19afdb5c0ffb31f2b6c89", + "parent_gene": "", + "protein_md5": "485cf2bd21128fd8bcaeb37bdeda982a", + "protein_translation": "MSSNTFTLGTKSVNRLGYGAMQLAGPGVFGPPRDRHVAITVLREALALGVNHIDTSDFYGPHVTNQIIREALYPYSDDLTIVTKIGARRGEDASWLPAFSPAELQKAVHDNLRNLGLDVLDVVNLRVMMGDGHGPAEGSIEASLTVLAEMQQQGLVKHIGLSNVTPTQVAEARKIAEIVCVQNEYNIAHRADDAMIDALAHDGIAYVPFFPLGGFTPLQSSTLSDVAASLGATPMQVALAWLLQRSPNILLIPGTSSVAHLRENMAAEKLHLSEEVLSTLDGISRE", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004701" + ], + [ + "gene_synonym", + "ECK1400" + ], + [ + "gene_synonym", + "EcoGene:EG11310" + ], + [ + "gene_synonym", + "GI:90111266" + ], + [ + "gene_synonym", + "GeneID:945983" + ], + [ + "gene_synonym", + "JW5221" + ], + [ + "gene_synonym", + "NP_415925.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25907" + ], + [ + "gene_synonym", + "b1407" + ], + [ + "gene_synonym", + "ydbD" + ] + ], + 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"ATGTTGAAGGCCAGGAATTGCGGCTGGATACGTTTACTGCCCCTGTTTATGCTGAGTCTACCAGTACAGGCGGAACTTCGATGTGTTGCAAATGCAGTTGATATTGAATCATTTTTTTCTGCGGCTACCGCTGAAGATAAACAACAAGTTGAACAAGCTATCAACAGTAGCGTGAATCTTGTCCCCTTCGGTTTATCTGCATCGAACTGGAAAGTGCATCGTGGCGATTTAGTGGTAGAAGGTAATATAGAGAGTAATCAAAAATTGATTGTTCTTGGGAATTTGACAGTCAAAGGTAATATTTCCACTTTCTCTCTTTCTAATCCATGGGTTATTCTCGGTAACGTGACGGCAACGAATATAGTTGCGGATTCACCACTGTTAATTACCGGTTCGATAAATGCAAGTGGACTGGTATTTATCGACTCATATTACGATAATCCGTCTACGATTAAGGGGAGTATTAATGCGCGTGGGATATTTATCAATGACATAATTGCACCTGTTGTTGCGTCTTCGACAAATAGTGAATTCATGGTCCGTGCGAGTGACAAACATGACACTGAAAATGTCAAAAAAGCGCTGATGATAATAAATCCTGATGCATATTATTGGGGGCTAATTAATGATGAAGATGCTCTGAAAGAAATTTTTAAGCGAAGCAATATTCGCATGGCAGGGAATGTCTGTAATCAGATGAAAAAAGAAGCGCTGTTTCGCCCTAAGCCTTCTCCTGAGTTAGTGCAAGAATTGCAAATGCTGGATGAAGGCAAAGTTGCTGCATTTGAAGGACGAGACATTGCGACATTTGATCTTGCCGTAATGCGAACTCTCCCAAGGCTTAAAGGAATTTCAGCTAACCTACGCAAACAACTTATTAATAGCAATGATGAACAAACGATTGAAAGTATGGCGAGATATATGCCTGACAATGAGATTCTGGAGTTGACCGATCAGCAATTGGGTTACCAGCCTGTTGTTCTGGGGTTGCTCGACCGTGAACCGCTCTCTGTCGAAATAATGACGCGAATGAGTCGTCTACCTGATGGTGTCGGTCCGTTGAATCTTGCGCTACGTGAAAATCTCCCTCTGGATATCGTCATGACTCTGGCGAAAAGAGATTGGGATATGATCATTCAGGAGCTTTATAAAGATGCGTGGTTATTGCCTGAATCCATTATTGATGGCTATATCCGCAGTGATGATTCCTCTATTCGTCAGGTCGGTGCTGGAGGACAACTCACCTACAATCAGGCAATGCAGTTGGCGAACGATTCATCAAACAATGTTGTCACAAGCTTAGCGTTCAAGCTGGCAGAGATGAAACACCATGGTCAATTGTTGCGGATGACGCCACAAGAGAGTGACAAAGTTGCAGGCTATTTATACCAAAAATTCGAGAATGACGATGATCTAATACGTGTGTTATTTTTAGCATTGCCAGATAACTTACAGTTTAATTTTGTTAAAAGGATGGAGAAAAAATCCCCGGCCTACTTTTGCTGTCGGGATATGCAGGTAATTCACTCTGACGCTGCTTTACAACGGTTATTGACACGTTTCAACGATCCTGAAGGGTGGAGTAATCTGGCGAAAAATCAGTATCTGAGCACGTCGATGAAACAAAAAATTTGGCAACGTGCTTTATCGCATCGGAAAAATAATCCGAAAGCAGATTCAGATGCATATGAAACCAGCGCTGATATGATTTTGTCTGAGCTGATTAGCCACGGCGAAGTTGATGACCAGATGCTATTAAATGCCACCGCCCTGATACGTTCGGACGACTGGGACTTTTTAGAGAGTGCATTAATTAGTTGGGATAATTTACCCGCTGTTGTTCTCAAGGAATTACAGCAAAACACGCCACGCAATGATATTTGGGCGAAGTTTTTTCTGAGGCAGGAAAACAGTTCCCGTGCGCAGGTTGACGAAGCGTTACGTGTTTATTATGCACTAGACCCCGATGCGTTAGCACAACTGGATGTACTGGCAAAACAACCGGATCGTATATGGTGGAGTACACTGGCGAAAAGCAATCTCACATTTTTCAAGTTCGGCGCACTTAACAACCGCCACACACCGCCTGCAGTACTGGCGGCAGAAATTGATCCCGAGTGGTGGATTGTGGCGATGAATAATCCCCGTTTTCCAGTTGATGTATTAAAGGCGAGGCTGAAACGTGATCCTTTGCTGGCGTTAGAGCTTGTTAACCCTGAACTGGATTTAGTCCGCCAGCTGGCGCTTAACGGTAAGACGCGCGCAATACGGGAACAAGCGATGAGAAAACTTGATGAGTTGTATTGA", 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"gene_synonym", + "GI:90111267" + ], + [ + "gene_synonym", + "GeneID:945973" + ], + [ + "gene_synonym", + "JW1405" + ], + [ + "gene_synonym", + "NP_415926.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76090" + ], + [ + "gene_synonym", + "b1408" + ], + [ + "gene_synonym", + "ynbA" + ] + ], + "dna_sequence": "ATGACGCTCTACCAGATAAAACCGCTCTTTCAGTCGCTGTTAAGGCCGACGATGTTTTGGCTTTATAAGCACCACGTTACAGCGAATCACATCACTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGCTTTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTACCATTTTTATTTTTACCGGAAAGTAACGCATCACTCGTGATACTCATGTTATTTTGCACCATATTGACCGAGTTTTGCGGTTTACTCGCGCAGACGATTAACGGTGTTCGCAGTTATGCCGGTCCATTTGGCAAAAGCGATCGCGCGTTAATATTTGGTCTGTGGGGTCTGGCCGTTGCCATTTATCCACAGTGGATGCAGTGGAATAATCTTTTATGGAGCATTGCTTCAATTCTGCTTCTCTGGACTGCGATTAATCGTTGTCGGAGTGTGCTTCTTATGAGCGCTGAAATATAA", + "dna_sequence_length": 606, + "functions": [ + "inner membrane protein" + ], + "id": "CDS_1396", + "location": [ + [ + "NC_000913", + 1477621, + "+", + 606 + ] + ], + "md5": "fb4a898c463c0e330b8b6f93842b23f6", + "parent_gene": "", + "protein_md5": "8776f6f0734e8e4da3d5838d71d3e3b6", + "protein_translation": "MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLAALALSLLTGLLLMLAAQPILFLLLPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALYLPFLFLPESNASLVILMLFCTILTEFCGLLAQTINGVRSYAGPFGKSDRALIFGLWGLAVAIYPQWMQWNNLLWSIASILLLWTAINRCRSVLLMSAEI", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004706" + ], + [ + "gene_synonym", + "ECK1402" + ], + [ + "gene_synonym", + "EcoGene:EG13749" + ], + [ + "gene_synonym", + "GI:16129370" + ], + [ + "gene_synonym", + "GeneID:945972" + ], + [ + "gene_synonym", + "JW1406" + ], + [ + "gene_synonym", + "NP_415927.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76091" + ], + [ + "gene_synonym", + "b1409" + ], + [ + "gene_synonym", + "ynbB" + ] + ], + "dna_sequence": "ATGCTGGAAAAATCTCTGGCAACACTTTTCGCGTTGTTAATTTTAGCAACGCTGATAAACCGTTTTCTGCTATGGCGGTTACCGGAGAGAAAAGGGGGTGAGGTTACATTACGTATTCGTACCTGGTGGGGCATCGTCATTTGTTTTTCAATGGTGATTTCAGGTCCACGCTGGATGACGTTGACGTTTTTTGCGCTGATAAGTTTTCTGGCATTGAAAGAATATTGTACGCTTATATCTGTACATTTTCCGCGTTGGTTATATTGGGGTATTCCTCTTAACTATTTGCTTATCGGTTTTAATTGCTTTGAGCTGTTTCTGTTATTTATACCTTTGGCTGGGTTTCTGATATTAGCCACCGGGCAAGTTTTAGTGGGTGACCCCTCTGGTTTTCTGCATACCGTGAGCGCCATTTTTTGGGGCTGGATAATGACCGTTTTCGCCTTGAGTCATGCCGCCTGGTTATTAATGTTGCCAACCACAAATATCCAGGGCGGGGCGTTACTGGTGTTATTTCTTTTGGCATTAACCGAGTCAAACGATATTGCACAGTATTTATGGGGAAAATCCTGCGGCAGAAGAAAAGTGGTCCCTAAAGTCAGCCCGGGAAAAACATTGGAAGGTCTGATGGGCGGCGTCATCACCATCATGATTGCGTCACTGATTATCGGACCGTTACTGACACCGCTAAATACATTACAGGCATTATTAGCGGGTTTGTTAATTGGTATTAGTGGTTTTTGCGGCGATGTCGTGATGTCAGCCATCAAACGAGATATTGGTGTTAAAGATAGCGGAAAACTATTGCCAGGACATGGCGGACTCCTTGACAGGATTGACTCATTAATTTTCACCGCTCCGGTATTTTTTTATTTTATACGCTACTGCTGTTACTGA", + "dna_sequence_length": 897, + "functions": [ + "putative CDP-diglyceride synthase" + ], + "id": "CDS_1397", + "location": [ + [ + "NC_000913", + 1478226, + "+", + 897 + ] + ], + "md5": "ae5a4ecbce9787af9cc170e5593de926", + "parent_gene": "", + "protein_md5": "86f1435d79803d10963912079c47d749", + "protein_translation": "MLEKSLATLFALLILATLINRFLLWRLPERKGGEVTLRIRTWWGIVICFSMVISGPRWMTLTFFALISFLALKEYCTLISVHFPRWLYWGIPLNYLLIGFNCFELFLLFIPLAGFLILATGQVLVGDPSGFLHTVSAIFWGWIMTVFALSHAAWLLMLPTTNIQGGALLVLFLLALTESNDIAQYLWGKSCGRRKVVPKVSPGKTLEGLMGGVITIMIASLIIGPLLTPLNTLQALLAGLLIGISGFCGDVVMSAIKRDIGVKDSGKLLPGHGGLLDRIDSLIFTAPVFFYFIRYCCY", + "protein_translation_length": 298, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004708" + ], + [ + "gene_synonym", + "ECK1403" + ], + [ + "gene_synonym", + "EcoGene:EG13750" + ], + [ + "gene_synonym", + "GI:16129371" + ], + [ + "gene_synonym", + "GeneID:945970" + ], + [ + "gene_synonym", + "JW1407" + ], + [ + "gene_synonym", + "NP_415928.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76092" + ], + [ + "gene_synonym", + "b1410" + ], + [ + "gene_synonym", + "ynbC" + ] + ], + "dna_sequence": "ATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGTTTTATCGGCACTGGCCCGCTTTACAGCCCGGGGCGAAAAAGGTCATCGTCTTATTTCATCGCGGGCATGAACATTCTGGTCGTCTACAACATCTCGTTGATGAACTGGCGATGCCAGATACTGCTTTTTATGCCTGGGATGCCCGAGGGCATGGAAAAAGTTCGGGGCCGCGTGGTTATAGCCCATCTCTTGCGCGTTCAGTGCGGGATGTCGATGAATTTGTCCGTTTTGCTGCCAGCGACAGCCAGGTTGGACTGGAAGAGGTGGTAGTGATCGCGCAAAGCGTCGGCGCAGTGCTGGTTGCCACATGGATTCATGATTATGCACCTGCAATTCGCGGGCTGGTGCTGGCTTCTCCGGCCTTTAAGGTTAAATTGTATGTGCCGCTGGCACGTCCTGCGCTGGCGTTATGGCATCGTCTGCGTGGTCTGTTTTTTATTAATTCCTATGTGAAAGGACGCTATTTGACCCACGATCGGCAACGGGGGGCGAGTTTCAATAATGATCCGCTGATCACACGGGCGATTGCCGTTAATATCTTGCTCGATCTCTACAAAACGTCTGAACGTATTATTAGAGATGCGGCGGCGATTACGCTCCCCACGCAACTTCTGATATCAGGCGATGACTATGTGGTGCATCGCCAACCGCAGATTGATTTTTATCAGAGATTACGTAGCCCTCTGAAAGAGCTGCATCTGCTGCCAGGCTTTTATCACGACACGTTGGGTGAAGAGAACAGGGCGCTGGCATTTGAAAAAATGCAAAGCTTTATTAGTCGTTTATATGCTAACAAATCGCAAAAATTTGATTATCAGCATGAAGACTGCACAGGACCATCAGCGGATCGATGGCGGCTACTTTCTGGTGGACCCGTGCCATTATCGCCGGTTGATTTAGCGTATCGCTTTATGCGAAAGGCGATGAAATTGTTCGGGACGCACTCTTCGGGCCTGCATCTCGGAATGAGCACCGGCTTTGATTCAGGCAGTTCGCTGGATTATGTCTATCAAAATCAACCGCAAGGTAGTAACGCATTCGGGCGTTTAGTCGACAAAATCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCCGATCTCCACGCCAAAGGTTTAGCCGTCCGCGTGGTTGACATTGCCGCAGGGCATGGGCGCTATGTACTGGATGCGCTGGCAAACGAGCCTGCCGTAAGCGATATTTTGTTACGTGATTACAGCGAGTTAAATGTTGCACAGGGGCAAGAGATGATTGCTCAACGGGGAATGTCTGGGCGGGTGCGTTTTGAACAGGGCGATGCGTTTAACCCGGAGGAACTCAGCGCGTTAACTCCGCGGCCTACGCTGGCGATTGTCTCTGGCCTGTATGAGCTTTTTCCCGAAAATGAGCAGGTAAAAAACTCACTCGCAGGTCTTGCCAATGCCATCGAACCGGGCGGCATTCTCATCTACACCGGGCAGCCGTGGCACCCTCAACTGGAGATGATTGCCGGGGTGTTAACCAGTCATAAAGATGGTAAACCGTGGGTAATGCGCGTGCGTTCGCAAGGGGAGATGGATTCACTCGTGCGTGATGCCGGATTTGATAAATGCACACAACGGATTGATGAGTGGGGTATTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGA", 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"ASAP:ABE-0004710" + ], + [ + "gene_synonym", + "ECK1404" + ], + [ + "gene_synonym", + "EcoGene:EG13751" + ], + [ + "gene_synonym", + "GI:16129372" + ], + [ + "gene_synonym", + "GeneID:945985" + ], + [ + "gene_synonym", + "JW1408" + ], + [ + "gene_synonym", + "NP_415929.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76093" + ], + [ + "gene_synonym", + "b1411" + ], + [ + "gene_synonym", + "ynbD" + ] + ], + "dna_sequence": "TTGCTACAAGGCGCTGGCTGGTTATTGTTGCTGGCCCCGTTTTTCTTCTTCACCTATGGATCTCTTAATCAGTTCACCGCGGTTCAGGACCTTAACAGCCATGATATCCCCAGTCAGGTATTCGGTTGGGAAACGGCGATCCCTTTTCTTCCCTGGACTATTGTTCCTTACTGGAGTCTGGATCTTTTATATGGATTTTCGCTGTTCGTTTGTAGCACGACATTCGAACAGCGCCGACTTGTCCACCGGCTTATTCTGGCAACGGTAATGGCCTGCTGCGGTTTTTTGCTCTATCCGCTGAAGTTTAGTTTTATCCGTCCTGAAGTGAGTGGGGTGACGGGATGGCTATTTTCGCAACTTGAACTGTTTGATCTGCCTTATAACCAGTCTCCTTCGCTGCATATTATTCTCTGCTGGCTACTTTGGCGTCACTTTCGTCAGCATCTGGCTGAGAGGTGGCGTAAAGTCTGCGGCGGATGGTTTTTACTCATCGCCATTTCGACGCTGACGACCTGGCAGCATCATTTTATTGATGTCATCACAGGGCTGGCGGTAGGTATGTTGATTGACTGGATGGTGCCCGTCGACCGTCGTTGGAATTATCAGAAACCTGATCAACGTCGAATCAAAATAGCACTGCCCTATGTCGTAGGCGCGGGCTCGTGCATTGTATTGATGGAGCTAATGATGATGATTCAGTTATGGTGGTCAGTCTGGTTATGTTGGCCAGTATTATCGCTACTCATAATTGGCCGTGGGTACGGTGGGCTTGGCGCGATAACAACAGGGAAAGATAGTCAGGGGAAACTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCGCATCGGGATGTGGCTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTTCCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATTACGCGAAGAGCAAGGCAGCGTTCTGGTCCATTGTGCATTGGGATTATCGCGCAGTGCGCTGGTGGTGGCGGCATGGTTGTTATGTTACGGACACTGTAAAACCGTTAATGAAGCGATTAGCTATATTCGAGCCAGACGCCCGCAGATTGTGCTGACAGACGAGCACAAAGCGATGCTGAGATTATGGGAAAACAGGTAA", 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"NADH-azoreductase, FMN-dependent" + ], + "id": "CDS_1400", + "location": [ + [ + "NC_000913", + 1482860, + "-", + 606 + ] + ], + "md5": "eda35f43bccabdff2ce8610735ee7dae", + "parent_gene": "", + "protein_md5": "f5c6f93beed5caed2e31c09f11f7a653", + "protein_translation": "MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSA", + "protein_translation_length": 201, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004718" + ], + [ + "gene_synonym", + "ECK1406" + ], + [ + "gene_synonym", + "EcoGene:EG12936" + ], + [ + "gene_synonym", + "GI:145698255" + ], + [ + "gene_synonym", + "GeneID:948444" + ], + [ + "gene_synonym", + "JW5905" + ], + [ + "gene_synonym", + "NP_415931.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43329" + ], + [ + "gene_synonym", + "b1413" + ], + [ + "gene_synonym", + "hrpA" + ] + ], + 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"MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG", 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"gene_synonym", + "ASAP:ABE-0285094" + ], + [ + "gene_synonym", + "ECK1409" + ], + [ + "gene_synonym", + "EcoGene:EG12103" + ], + [ + "gene_synonym", + "GeneID:2847738" + ], + [ + "gene_synonym", + "JW1413" + ], + [ + "gene_synonym", + "JW5906" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33898" + ], + [ + "gene_synonym", + "b4493" + ], + [ + "gene_synonym", + "gapC" + ] + ], + "dna_sequence": "ATGAGTAAAGTTGGTATTAACGGTTTTGGTCGTATCGGTCGACTGGTGTTGGGTCGATTACTTGAAGTCAAAAGCAACATAGACGTTGTCGCTATTAATGATCTCACTTCCCCATAAATTCTCGCCTACCTGCTGAAACATGATTCAAACTACGGACCATTCCCCTGGAGCGTTGATTTTACGGAAGATTCACTTATCGTTGATGGGAAAAGTATCGCGGTTTACGCCGAAAAAGAGGCTAAAAATATTCCGTGGAAAGCGAAAGGTGCAGAAATCATTGTCGAATGTACTGGCTTTTATACCTCCGCCGAGAAATCGCAGGCGCATCTTGATGCTGGTGCGAAGAAGGTGTTGATTTCCGCCCCTGCCGGTGAAATGAAAACTATCGTTTATAACGTCAATGACGACACTCTGGATGGCAACGACACCATTGTTTCCGTGGCGTCATGCACCACTAACTGTCTTGCGCCGATGGCCAAAGCCTTGCATGACAGTTTCGGGATAGAAGTCGGCACGATGACGACCATTCATGCCTATACTGGCACCCAGTCACTGGTGGATGGCCCGCGTGGTAAAGATTTACGTGCTTCACGCGCAGCGGCAGAAAATATCATTCCCCACACTACGGGGGCGGCAAAAGCCATTGGTCTGGTGATCCCGGAACTGAGCGGCAAACTGAAAGGTCATGCGCAACGCGTGCCGGTGAAAACAGGTTCGGTCACTGAACTGGTATCGATTCTCGGAAAAAAGGTGACTGCCGAAGAGGTGAATAACGCACTTAAACAAGCAACCACCAATAACGAGTCATTTGGTTATACCGATGAAGAAATAGTCTCTTCCGATATCATTGGCAGCCATTTCGGTTCGGTGTTTGATGCCACGCAAACGGAAATTACCGCCGTGGGCGATTTACAACTGGTGAAAACGGTCGCCTGGTACGATAACGAATATGGCTTCGTCACACAGCTTATTCGCACCCTCGAAAAATTCGCTAAACTCTGA", 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"JW1426" + ], + [ + "gene_synonym", + "NP_415947.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25397" + ], + [ + "gene_synonym", + "b1430" + ], + [ + "gene_synonym", + "tehB" + ] + ], + "dna_sequence": "ATGATCATTCGTGACGAAAACTATTTTACTGATAAATATGAATTAACCCGCACACACTCTGAAGTACTGGAAGCGGTGAAAGTGGTTAAACCGGGTAAAACGCTGGATCTGGGCTGTGGCAATGGTCGTAACAGTCTTTACCTGGCAGCCAATGGTTATGATGTTGACGCATGGGATAAAAATGCCATGAGTATCGCCAACGTCGAGCGCATTAAATCCATTGAAAATCTGGATAATTTACACACCCGAGTCGTTGATCTGAATAACCTCACATTTGATAGACAGTACGATTTTATTCTTTCGACTGTGGTGCTGATGTTCCTTGAGGCTAAAACCATCCCCGGGTTGATTGCCAATATGCAACGTTGCACTAAACCTGGTGGTTACAACCTGATTGTGGCGGCGATGGATACCGCTGATTATCCATGTACCGTCGGCTTCCCGTTTGCCTTCAAAGAGGGAGAATTACGTCGATATTACGAAGGCTGGGAGAGGGTGAAATACAATGAAGACGTCGGCGAGCTGCACCGCACCGACGCCAACGGTAATCGTATTAAACTGCGTTTCGCCACGATGCTGGCACGTAAAAAATGA", + "dna_sequence_length": 594, + "functions": [ + "tellurite, selenium methyltransferase, SAM-dependent", + "tellurite, selenium resistance protein" + ], + "id": "CDS_1417", + "location": [ + [ + "NC_000913", + 1501562, + "+", + 594 + ] + ], + "md5": "18c3302bee2a08d5bd72f4583d2b171b", + "parent_gene": "", + "protein_md5": "2d6523ddf0ad0be0f0ebd2425a2ed785", + "protein_translation": "MIIRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEGWERVKYNEDVGELHRTDANGNRIKLRFATMLARKK", + "protein_translation_length": 197, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004775" + ], + [ + "gene_synonym", + "ECK1424" + ], + [ + "gene_synonym", + "EcoGene:EG13755" + ], + [ + "gene_synonym", + "GI:16129390" + ], + [ + "gene_synonym", + "GeneID:948203" + ], + [ + "gene_synonym", + "JW1427" + ], + [ + "gene_synonym", + "NP_415948.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64451" + ], + [ + "gene_synonym", + "b1431" + ], + [ + "gene_synonym", + "ydcL" + ] + ], + "dna_sequence": "ATGCGTACCACATCATTTGCGAAAGTTGCAGCTTTATGCGGCTTATTGGCTCTGTCTGGTTGTGCATCTAAAATCACCCAGCCAGATAAATATTCTGGTTTTTTAAACAATTACTCTGATTTAAAAGAAACAACCTCGGCTACAGGTAAACCTGTTTTACGTTGGGTAGACCCGAGTTTTGATCAAAGCAAATATGACAGCATCGTCTGGAACCCAATCACTTATTATCCGGTACCGAAACCGTCGACCCAGGTAGGGCAGAAAGTTCTGGATAAAATTTTGAACTATACCAACACCGAAATGAAAGAAGCGATAGCGCAGCGTAAACCACTGGTTACCACCGCTGGGCCGCGTAGTCTGATTTTCCGTGGGGCCATTACCGGTGTAGATACCAGCAAAGAAGGGCTGCAATTCTATGAAGTGGTTCCTGTTGCATTAGTGGTTGCGGGGACGCAAATGGCTACAGGCCACCGTACCATGGATACTCGCCTCTATTTTGAAGGTGAGCTGATTGATGCAGCGACTAATAAACCGGTTATCAAAGTCGTTCGTCAGGGCGAAGGTAAAGACCTGAATAACGAAAGTACGCCAATGGCTTTCGAAAATATTAAACAAGTTATTGATGACATGGCGACCGATGCCACCATGTTTGACGTTAACAAAAAGTAG", + "dna_sequence_length": 669, + "functions": [ + "lipoprotein" + ], + "id": "CDS_1418", + "location": [ + [ + "NC_000913", + 1502457, + "+", + 669 + ] + ], + "md5": "13e8fa0fc4398654ddd763f437f14bcb", + "parent_gene": "", + "protein_md5": "b0e55e17c63be92cf77373e9cd1ef18e", + "protein_translation": 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"EcoGene:EG13756" + ], + [ + "gene_synonym", + "GI:288551665" + ], + [ + "gene_synonym", + "GeneID:944942" + ], + [ + "gene_synonym", + "JW5228" + ], + [ + "gene_synonym", + "NP_415949.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76102" + ], + [ + "gene_synonym", + "b1432" + ], + [ + "gene_synonym", + "insQ" + ], + [ + "gene_synonym", + "orf2" + ], + [ + "gene_synonym", + "orfB" + ], + [ + "gene_synonym", + "tnpB" + ], + [ + "gene_synonym", + "ydcM" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:947312" + ], + [ + "gene_synonym", + "JW1467" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76123" + ], + [ + "gene_synonym", + "b1471" + ], + [ + "gene_synonym", + "yddJ" + ], + [ + "gene_synonym", + "yddK" + ] + ], + "dna_sequence": 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"GeneID:945737" + ], + [ + "gene_synonym", + "JW1468" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77519" + ], + [ + "gene_synonym", + "b1472" + ], + [ + "gene_synonym", + "yddL" + ] + ], + "dna_sequence": "ATGAAATTAAAAATAGTTGCGGTGGTTGTAACTGGTTTGTTAGCTGCGAACGTAGCACACGCTGCCGAAGTCTATAACAAGGATGGTAATAAACTCGACCTTTATGGCAAGGTTACCGCTCTACGTTATTTTACTGATGATAAGCGTGACGATGGTGATAAAACTTATGCCCGTCTCGGCTTTAAAGGAGAAACGCAAATCAATGATCAAATGATTGGTTTTGGTCACTGGGAATATGATTTTAAAGGCTATAACGATGAAGCCAACGGCTCGCGCGGC", + "dna_sequence_length": 279, + "id": "CDS_1459", + "location": [ + [ + "NC_000913", + 1546028, + "-", + 279 + ] + ], + "md5": "7325bf1fa1417c959cbaeb19f3356b14", + "parent_gene": "", + "protein_md5": "773e21d6b380b85e4008ca680e2939a2", + "protein_translation": "MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYFTDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRG", + "protein_translation_length": 93, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004912" + ], + [ + "gene_synonym", 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"ae925f781542f62e0289ab620afba05e", + "parent_gene": "", + "protein_md5": "0ef5fe073a18ffe29165fe9bf865a23a", + "protein_translation": "MSKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTQTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI", + "protein_translation_length": 217, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004925" + ], + [ + "gene_synonym", + "ECK1471" + ], + [ + "gene_synonym", + "EcoGene:EG13784" + ], + [ + "gene_synonym", + "GI:145698261" + ], + [ + "gene_synonym", + "GeneID:946040" + ], + [ + "gene_synonym", + "JW5908" + ], + [ + "gene_synonym", + "NP_415994.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67699" + ], + [ + "gene_synonym", + "b1477" + ], + [ + "gene_synonym", + "yddM" + ] + ], + "dna_sequence": 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"b1486" + ], + [ + "gene_synonym", + "ddpB" + ], + [ + "gene_synonym", + "yddR" + ] + ], + "dna_sequence": "GTGACCTTCTGGAGTATTTTACGCCAACGCTGCTGGGGGCTGGTGCTCGTGGTGGCGGGCGTCTGCGTGATTACGTTTATTATCTCGCATCTGATCCCTGGTGATCCGGCGCGGTTACTGGCGGGTGACCGCGCCAGCGATGCTATCGTGGAAAATATTCGCCAGCAACTGGGACTGGACCAGCCACTGTATGTACAGTTTTACCGCTACGTCAGCGACCTGTTTCATGGTGACCTGGGAACATCCATTCGTACCGGGCGTCCGGTGCTGGAAGAGTTGCGTATATTTTTCCCGGCGACGCTGGAGCTGGCTTTTGGTGCCCTGCTGCTGGCACTCCTGATTGGCATCCCGCTGGGCATACTCTCTGCAGTCTGGCGAAATCGCTGGCTGGATCATCTGGTGCGAATAATGGCCATTACCGGAATCTCCACACCTGCGTTCTGGCTTGGGCTGGGCGTCATTGTGCTGTTTTATGGTCATCTGCAAATTCTTCCCGGCGGCGGAAGGCTTGATGACTGGCTGGATCCACCAACGCACGTTACCGGCTTTTATCTGCTCGATGCGCTGCTTGAAGGCAACGGTGAAGTCTTCTTCAATGCGTTGCAACATCTCATCTTACCGGCATTAACGCTGGCGTTCGTTCACCTGGGAATTGTCGCTCGCCAGATCCGCTCAGCGATGCTGGAACAATTGAGTGAAGACTACATTCGTACCGCCCGGGCCAGCGGCTTGCCCGGCTGGTATATCGTTTTATGTTATGCGCTACCCAATGCGTTGATCCCATCGATTACCGTATTGGGTTTGGCGCTGGGCGATTTGTTGTATGGCGCAGTGCTCACCGAAACCGTTTTTGCCTGGCCCGGAATGGGTGCATGGGTAGTAACATCAATACAGGCGCTCGACTTCCCGGCAGTGATGGGCTTTGCCGTCGTGGTTTCATTTGCTTATGTGCTGGTCAACCTGGTGGTGGATTTGCTCTATTTGTGGATTGATCCGCGTATCGGACGTGGAGGTGGTGAATGA", 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"JW5240" + ], + [ + "gene_synonym", + "NP_416004.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76128" + ], + [ + "gene_synonym", + "b1487" + ], + [ + "gene_synonym", + "ddpA" + ], + [ + "gene_synonym", + "yddS" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK1482" + ], + [ + "gene_synonym", + "EcoGene:EG13791" + ], + [ + "gene_synonym", + "GI:16129447" + ], + [ + "gene_synonym", + "GeneID:945532" + ], + [ + "gene_synonym", + "JW1483" + ], + [ + "gene_synonym", + "NP_416005.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77790" + ], + [ + "gene_synonym", + "b1488" + ], + [ + "gene_synonym", + "ddpX" + ], + [ + "gene_synonym", + "vanX" + ], + [ + "gene_synonym", + "yddT" + ] + ], + "dna_sequence": 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"MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHKDAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGTAIDLTLRDEHGNILDMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGISSEWWHFELPQAASYPLLADQFSCFISPGTQHVS", + "protein_translation_length": 193, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004963" + ], + [ + "gene_synonym", + "ECK1483" + ], + [ + "gene_synonym", + "EcoGene:EG13792" + ], + [ + "gene_synonym", + "GI:162135902" + ], + [ + "gene_synonym", + "GeneID:945815" + ], + [ + "gene_synonym", + "JW1484" + ], + [ + "gene_synonym", + "NP_416006.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76129" + ], + [ + "gene_synonym", + "b1489" + ], + [ + "gene_synonym", + "dos" + ], + [ + "gene_synonym", + "dosP" + ], + [ + "gene_synonym", + "yddU" + ] + ], + "dna_sequence": "ATGAAGCTAACCGATGCGGATAATGCCGCCGATGGCATTTTTTTCCCCGCCCTTGAGCAAAATATGATGGGTGCGGTGTTAATTAACGAAAATGATGAAGTGATGTTTTTCAACCCCGCCGCAGAGAAGCTCTGGGGATACAAACGTGAAGAAGTCATTGGCAATAACATTGATATGCTGATTCCGCGGGATTTGCGTCCTGCGCATCCTGAATACATTCGTCACAACCGTGAAGGCGGTAAAGCGCGTGTTGAGGGGATGAGTCGGGAGCTGCAGCTGGAGAAAAAAGACGGCAGTAAAATCTGGACCCGTTTTGCGCTATCGAAAGTGAGCGCCGAGGGGAAAGTTTATTACCTGGCGCTGGTACGGGATGCCAGCGTAGAAATGGCGCAAAAAGAACAGACCCGACAATTGATTATTGCCGTTGACCATCTCGACCGACCGGTGATTGTCCTCGATCCGGAACGCCATATTGTGCAGTGCAATCGCGCATTTACCGAAATGTTTGGTTACTGCATTAGCGAAGCCAGCGGTATGCAGCCCGATACACTCCTGAACATTCCTGAATTCCCTGCCGATAACCGCATTCGTTTACAACAGTTGCTATGGAAAACCGCCCGCGATCAGGACGAATTTCTGCTGTTGACGCGCACCGGTGAAAAAATCTGGATTAAAGCCTCTATCAGCCCGGTTTATGACGTGCTCGCGCATCTGCAGAACCTGGTAATGACTTTCTCGGATATCACCGAAGAACGGCAGATTCGCCAGCTTGAAGGCAATATTCTCGCCGCCATGTGCAGCAGCCCGCCATTTCATGAAATGGGGGAAATCATTTGTCGTAACATCGAATCTGTACTCAACGAATCGCATGTTTCGCTGTTCGCACTGCGCAACGGGATGCCGATACACTGGGCGTCATCTTCCCACGGTGCAGAAATTCAAAATGCGCAAAGCTGGTCAGCGACCATTCGTCAGCGTGATGGCGCGCCTGCGGGGATCCTGCAAATTAAAACCTCGTCAGGAGCAGAAACCAGCGCCTTTATCGAACGCGTGGCAGATATCAGCCAGCATATGGCCGCGCTGGCGCTGGAACAGGAAAAAAGCCGTCAGCATATTGAACAACTCATCCAATTTGATCCGATGACCGGTCTGCCAAATCGCAATAACCTGCACAATTACCTCGATGACCTGGTCGACAAAGCCGTCTCTCCCGTGGTGTATCTCATCGGTGTTGACCATATTCAGGATGTGATTGATAGCCTTGGCTATGCGTGGGCCGATCAGGCATTGCTGGAAGTGGTCAATCGCTTTCGTGAAAAACTCAAACCGGATCAGTATCTCTGTCGTATCGAAGGTACGCAGTTTGTCCTCGTGAGCCTCGAAAACGACGTCAGTAACATTACCCAAATCGCCGATGAGCTACGGAATGTGGTCAGCAAGCCGATAATGATTGACGATAAACCCTTCCCGCTTACCTTGAGTATTGGCATCAGCTACGACCTGGGTAAAAACCGCGATTACTTGCTCTCCACTGCTCACAATGCAATGGATTATATTCGCAAGAATGGCGGTAACGGCTGGCAGTTCTTCAGCCCGGCGATGAACGAAATGGTAAAAGAGCGTTTGGTTTTAGGCGCAGCGCTGAAAGAAGCGATTAGCAATAACCAACTGAAACTGGTTTACCAGCCGCAAATCTTCGCAGAAACGGGTGAACTGTACGGCATCGAAGCCCTTGCTCGCTGGCACGATCCCCTGCATGGTCATGTGCCCCCTTCACGGTTTATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCGGAAGCTTGCCGTCAGTTAGCAGAATGGCGTAGCCAGAATATTCATATCCCGGCGTTATCCGTGAACTTGTCGGCGCTGCACTTTCGCAGTAATCAACTGCCTAATCAGGTGTCTGATGCAATGCACGCCTGGGGTATTGACGGCCACCAGCTGACGGTAGAAATCACGGAAAGCATGATGATGGAACACGATACCGAAATCTTTAAGCGCATTCAGATCCTGCGTGATATGGGCGTGGGCTTATCGGTAGATGATTTTGGTACGGGCTTTTCCGGATTATCCCGCTTAGTCAGTCTTCCGGTAACGGAAATCAAAATTGACAAAAGTTTTGTCGATCGTTGTCTGACCGAAAAACGCATCCTTGCCTTACTTGAAGCCATTACCAGCATTGGGCAAAGCCTCAATTTAACCGTCGTGGCGGAAGGCGTCGAAACCAAAGAGCAATTTGAGATGCTACGCAAGATCCACTGTCGCGTTATTCAGGGATATTTCTTTTCCCGCCCCCTACCCGCCGAAGAAATTCCAGGCTGGATGAGCAGCGTGTTACCGCTGAAAATCTGA", 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"MKLTDADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGEIICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEIQNAQSWSATIRQRDGAPAGILQIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHNYLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKPDQYLCRIEGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDLGKNRDYLLSTAHNAMDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIFAETGELYGIEALARWHDPLHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRSQNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFKRIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAITSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLKI", + "protein_translation_length": 799, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004965" + ], + [ + "gene_synonym", + "ECK1484" + ], + [ + "gene_synonym", + "EcoGene:EG13793" + ], + [ + "gene_synonym", + "GI:145698262" + ], + [ + "gene_synonym", + "GeneID:945835" + ], + [ + "gene_synonym", + "JW5241" + ], + [ + "gene_synonym", + "NP_416007.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA89" + ], + [ + "gene_synonym", + "b1490" + ], + [ + "gene_synonym", + "dosC" + ], + [ + "gene_synonym", + "yddV" + ] + ], + "dna_sequence": "ATGGAGATGTATTTTAAAAGAATGAAAGATGAGTGGACCGGACTTGTCGAACAGGCAGATCCGCCCATTCGTGCTAAAGCCGCGGAAATTGCCGTTGCGCATGCTCATTATCTGAGTATCGAGTTTTATCGAATTGTCCGCATCGACCCGCATGCCGAAGAATTCTTGAGTAATGAACAAGTTGAGCGGCAGTTGAAGAGTGCGATGGAACGCTGGATTATTAACGTGCTTTCTGCCCAGGTTGACGATGTCGAAAGGCTAATACAAATCCAGCATACCGTCGCGGAAGTGCATGCCCGCATAGGAATTCCGGTAGAAATTGTCGAGATGGGGTTTCGGGTGCTGAAAAAAATCCTCTATCCGGTGATCTTCTCTTCGGATTATTCCGCCGCAGAAAAACTTCAGGTCTACCATTTCTCGATTAACAGTATTGATATCGCGATGGAAGTGATGACTCGCGCGTTTACCTTTAGTGACAGTAGTGCCTCAAAGGAAGATGAAAACTATCGTATCTTCTCGTTACTGGAAAACGCCGAAGAAGAAAAAGAACGGCAAATAGCCTCAATACTTTCATGGGAAATAGATATTATCTATAAAATCCTGCTGGATTCTGATTTAGGCAGTAGTTTGCCTTTAAGCCAGGCTGATTTTGGCCTGTGGTTTAACCATAAAGGTCGACATTATTTTAGTGGTATTGCCGAAGTAGGCCATATCTCCCGTCTGATTCAGGATTTCGACGGTATTTTCAATCAAACCATGCGTAACACCAGAAATTTGAATAACAGAAGTCTGCGGGTGAAATTTTTATTACAGATAAGAAATACCGTATCGCAAATTATTACCTTGCTGCGTGAATTGTTTGAAGAAGTATCGCGCCACGAAGTCGGTATGGATGTACTGACGAAATTACTTAACCGCCGTTTCCTACCGACTATCTTCAAACGCGAAATTGCCCATGCCAACCGGACCGGTACACCGCTGTCAGTGCTGATTATTGACGTTGATAAATTCAAAGAGATCAACGATACGTGGGGCCATAACACTGGTGATGAAATTCTGCGTAAAGTCTCTCAGGCCTTTTATGACAACGTCCGCAGTAGTGATTATGTTTTCCGCTACGGGGGCGATGAATTTATCATTGTTTTGACTGAAGCTTCTGAAAACGAAACGTTACGTACCGCAGAACGTATTCGCAGTCGGGTGGAGAAAACCAAACTGAAAGCCGCAAACGGCGAAGATATTGCCCTCTCACTTTCCATCGGTGCCGCCATGTTTAATGGTCATCCTGACTATGAGCGCCTCATTCAAATAGCCGATGAAGCTCTGTATATCGCCAAAAGACGAGGTAGAAACCGTGTTGAACTCTGGAAAGCCAGTCTTTAG", 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"ECK1485" + ], + [ + "gene_synonym", + "EcoGene:EG13794" + ], + [ + "gene_synonym", + "GI:16129450" + ], + [ + "gene_synonym", + "GeneID:945975" + ], + [ + "gene_synonym", + "JW1486" + ], + [ + "gene_synonym", + "NP_416008.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64426" + ], + [ + "gene_synonym", + "b1491" + ], + [ + "gene_synonym", + "yddW" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16129451" + ], + [ + "gene_synonym", + "GeneID:946057" + ], + [ + "gene_synonym", + "JW1487" + ], + [ + "gene_synonym", + "NP_416009.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63235" + ], + [ + "gene_synonym", + "acsA" + ], + [ + "gene_synonym", + "b1492" + ], + [ + "gene_synonym", + "gadC" + ], + [ + "gene_synonym", + "xasA" + ] + ], + "dna_sequence": 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"ECK1487" + ], + [ + "gene_synonym", + "EcoGene:EG11490" + ], + [ + "gene_synonym", + "GI:16129452" + ], + [ + "gene_synonym", + "GeneID:946058" + ], + [ + "gene_synonym", + "JW1488" + ], + [ + "gene_synonym", + "NP_416010.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69910" + ], + [ + "gene_synonym", + "b1493" + ], + [ + "gene_synonym", + "gadB" + ] + ], + "dna_sequence": 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"EcoGene:EG11744" + ], + [ + "gene_synonym", + "GI:16129453" + ], + [ + "gene_synonym", + "GeneID:946059" + ], + [ + "gene_synonym", + "JW1489" + ], + [ + "gene_synonym", + "NP_416011.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31828" + ], + [ + "gene_synonym", + "b1494" + ], + [ + "gene_synonym", + "pqqE" + ], + [ + "gene_synonym", + "pqqL" + ], + [ + "gene_synonym", + "pqqM" + ], + [ + "gene_synonym", + "yddC" + ] + ], + "dna_sequence": 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"MEIIMRNLCFLLTLVATLLLPGRLIAAALPQDEKLITGQLDNGLRYMIYPHAHPKDQVNLWLQIHTGSLQEEDNELGVAHFVEHMMFNGTKTWPGNKVIETFESMGLRFGRDVNAYTSYDETVYQVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEVDAERGVITEEWRAHQDAKWRTSQARRPFLLANTRNLDREPIGLMDTVATVTPAQLRQFYQRWYQPNNMTFIVVGDIDSKEALALIKDNLSKLPANKAAENRVWPTKAENHLRFNIINDKENRVNGIALYYRLPMVQVNDEQSFIEQAEWSMLVQLFNQRLQERIQSGELKTISGGTARSVKIAPDYQSLFFRVNARDDNMQDAANALMAELATIDQHGFSAEELDDVKSTRLTWLKNAVDQQAERDLRMLTSRLASSSLNNTPFLSPEETYQLSKRLWQQITVQSLAEKWQQLRKNQDAFWEQMVNNEVAAKKALSPAAILALEKEYANKKLAAYVFPGRNLSLTVDADPQAEISSKETLAENLTSLTLSNGARVILAKSAGEEQKLQIIAVSNKGDLSFPAQQKSLIALANKAVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMNTLLSVSARTNNPEPGFQLINQRITHSTINDNIWASLQNAQIQALKTLDQRPAEKFAQQMYETRYADDRTKLLQENQIAQFTAADALAADRQLFSSPADITFVIVGNVAEDKLVALITRYLGSIKHSDSPLAAGKPLTRATDNASVTVKEQNEPVAQVSQWKRYDSRTPVNLPTRMALDAFNVALAKDLRVNIREQASGAYSVSSRLSVDPQAKDISHLLAFTCQPERHDELLTLANEVMVKRLAKGISEQELNEYQQNVQRSLDIQQRSVQQLANTIVNSLIQYDDPAAWTEQEQLLKQMTVENVNTAVKQYLSHPVNTYTGVLLPK", + "protein_translation_length": 931, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0004982" + ], + [ + "gene_synonym", + "ECK1489" + ], + [ + "gene_synonym", + "EcoGene:EG11743" + ], + [ + "gene_synonym", + "GI:16129454" + ], + [ + "gene_synonym", + "GeneID:945961" + ], + [ + "gene_synonym", + "JW1490" + ], + [ + "gene_synonym", + "NP_416012.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31827" + ], + [ + "gene_synonym", + "b1495" + ], + [ + "gene_synonym", + "yddB" + ] + ], + "dna_sequence": 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+ ], + [ + "gene_synonym", + "GI:16129455" + ], + [ + "gene_synonym", + "GeneID:945945" + ], + [ + "gene_synonym", + "JW5242" + ], + [ + "gene_synonym", + "NP_416013.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31826" + ], + [ + "gene_synonym", + "b1496" + ], + [ + "gene_synonym", + "yddA" + ] + ], + "dna_sequence": "ATGATAACCATTCCCATTACGCTTCGTATGTTGATAGCAAAGTATCTCTGTCTGTTGAAGCCCTTTTGGCTGCGTAAGAATAATAAAACTTCAGTGTTGTTAATCATTATTATCCTCGCCATGATCCTTGGCGTGGTTAAAATTCAGGTCTGGTTAAACGACTGGAATAATGATTTTTTCAATGCGCTAAGCCAGAAAGAAACCGATAAGCTTTGGCAGCTTGTCCTTTGGTTCCCTGCCCTGCTGGGGATCTTTGTATTAATATCCGTAAACAAAACATGGTTAATTAAACTACTGACTATTCGCTGGCGCGAATGGTTAACAGATTACTACCTTAATCGGTGGTTTGCAGATAAAAACTACTACTTCACGCAGATCTACGGCGAGCATAAAAATACAGATAACCCTGACCAACGTATCGCTGAAGACATTCTCTTACTGATCAGCAAAACGCTCAGTCTTTCATTTGGCTTCATCCAGTCACTTAGCATGCTGATCACCTTTACCGTTATTCTTTGGGAAAGCGCGGGTACGCTCTCATTCACTGTTGGTGGAACAGAATGGAATATCCAGGGGTATATGGTCTATACCGTCGTGCTCATTGTGATCGGTGGAACTTTATTTACCCATAAGGTGGGTAAACGTATTCGTCCGCTTAATGTGGAAAAACAACGTAGCGAAGCGACATTTCGAACAAATCTTGTGCAGCATAATAAGCAGGCAGAACTGATTGCGCTAAGCAATGCTGAGTCTCTACAACGCCAGGAGTTGAGCGACAATTTTCATACCATTAAAGAGAACTGGCATCGTTTAATGAATCGTCAGCGGTGGCTTGATTACTGGCAGAATATTTATTCGCGCTCGCTTAGCGTTCTTCCCTACTTTCTGTTATTGCCGCAGTTTATTAGCGGGCAGATCAATCTGGGCGGACTGATGAAATCGCGCCAGGCATTTATGCTGGTATCGAACAATTTAAGCTGGTTTATTTATAAATATGACGAACTTGCTGAACTGGCTGCGGTTATCGATCGCTTGTATGAGTTCCATCAACTCACTGAACAGCGCCCTACGAATAAGCCTAAAAATTGCCAACATGCGGTACAAGTGGCTGATGCGAGTATTCGTACGCCTGATAATAAGATCATATTAGAGAACCTGAACTTTCATGTTTCGCCAGGCAAATGGCTATTACTGAAAGGCTACTCTGGCGCGGGAAAAACCACACTGCTTAAAACATTATCCCACTGCTGGCCGTGGTTTAAAGGTGATATTTCTTCTCCTGCTGACAGTTGGTATGTGTCACAAACACCGTTAATCAAAACCGGCTTACTGAAAGAGATTATTTGTAAAGCACTTCCCCTGCCCGTAGACGATAAATCGTTGAGCGAAGTACTGCATCAGGTTGGTCTTGGGAAATTGGCTGCGCGTATTCATGACCACGATCGCTGGGGAGATATTCTTTCCAGCGGCGAAAAACAACGTATCGCCCTGGCACGATTAATTTTACGACGTCCGAAATGGATATTTCTTGACGAAACTACCTCTCATCTTGAGGAACAAGAGGCTATCCGCTTACTGCGTTTAGTGCGTGAAAAACTACCCACAAGCGGCGTCATTATGGTTACACATCAACCCGGTGTCTGGAACCTGGCCGATGATATTTGTGACATTAGCGCGGTTTTATAA", 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"gene_synonym", + "ASAP:ABE-0004986" + ], + [ + "gene_synonym", + "ECK1491" + ], + [ + "gene_synonym", + "EcoGene:EG13795" + ], + [ + "gene_synonym", + "GI:90111285" + ], + [ + "gene_synonym", + "GeneID:945981" + ], + [ + "gene_synonym", + "JW1492" + ], + [ + "gene_synonym", + "NP_416014.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76134" + ], + [ + "gene_synonym", + "b1497" + ], + [ + "gene_synonym", + "ydeM" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:945957" + ], + [ + "gene_synonym", + "JW5243" + ], + [ + "gene_synonym", + "NP_416015.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77318" + ], + [ + "gene_synonym", + "b1498" + ], + [ + "gene_synonym", + "ydeN" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0004992" + ], + [ + "gene_synonym", + "ECK1493" + ], + [ + "gene_synonym", + "EcoGene:EG13797" + ], + [ + "gene_synonym", + "GI:16129458" + ], + [ + "gene_synonym", + "GeneID:945922" + ], + [ + "gene_synonym", + "JW1494" + ], + [ + "gene_synonym", + "NP_416016.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76135" + ], + [ + "gene_synonym", + "b1499" + ], + [ + "gene_synonym", + "ydeO" + ] + ], + "dna_sequence": "ATGTCGCTCGTTTGTTCTGTTATATTTATTCATCATGCCTTCAACGCTAACATTTTAGATAAAGATTACGCCTTCTCTGACGGCGAGATCCTGATGGTAGATAACGCTGTTCGTACGCATTTTGAACCTTATGAGCGGCATTTTAAAGAGATCGGATTTACTGAAAATACCATTAAAAAATATCTACAATGCACTAACATCCAGACAGTGACGGTGCCTGTTCCTGCGAAGTTTTTACGTGCTTCAAATGTACCGACTGGATTGCTTAATGAAATGATTGCTTATCTCAACTCGGAAGAACGCAATCATCATAATTTTTCAGAACTTTTGCTTTTTTCTTGCCTGTCTATTTTTGCCGCATGCAAAGGTTTCATTACACTATTAACTAACGGTGTGCTATCCGTTTCTGGGAAAGTGAGAAATATTGTCAACATGAAGCCGGCGCACCCATGGAAGCTGAAAGATATTTGTGACTGCCTGTACATCAGTGAAAGCCTGTTGAAGAAAAAACTTAAGCAAGAGCAAACGACATTCTCACAGATTCTTTTAGATGCAAGAATGCAGCACGCAAAAAATTTGATACGCGTAGAAGGTTCAGTCAATAAAATTGCCGAACAATGTGGTTATGCCAGTACATCTTATTTTATTTATGCGTTCCGCAAACATTTCGGCAACAGTCCGAAGAGAGTTTCTAAGGAGTACCGTTGTCAAAGTCACACGGGTATGAATACGGGCAACACGATGAATGCTTTAGCTATTTGA", + "dna_sequence_length": 762, + "functions": [ + "UV-inducible global regulator, EvgA-, GadE-dependent" + ], + "id": "CDS_1486", + "location": [ + [ + "NC_000913", + 1583687, + "-", + 762 + ] + ], + "md5": "2182223141f739424f3b05abf3ba537b", + "parent_gene": "", + "protein_md5": "708dfdb2806673304fce02223e94fba4", + "protein_translation": "MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFTENTIKKYLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEERNHHNFSELLLFSCLSIFAACKGFITLLTNGVLSVSGKVRNIVNMKPAHPWKLKDICDCLYISESLLKKKLKQEQTTFSQILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYAFRKHFGNSPKRVSKEYRCQSHTGMNTGNTMNALAI", + "protein_translation_length": 253, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4475" + ], + [ + "gene_synonym", + "EcoGene:EG14466" + ], + [ + "gene_synonym", + "GI:16129459" + ], + [ + "gene_synonym", + "GeneID:946061" + ], + [ + "gene_synonym", + "NP_416017.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76136" + ], + [ + "gene_synonym", + "b1500" + ], + [ + "gene_synonym", + "safA" + ], + [ + "gene_synonym", + "yneN" + ] + ], + "dna_sequence": 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"ECK1505" + ], + [ + "gene_synonym", + "EcoGene:EG13805" + ], + [ + "gene_synonym", + "GI:16129471" + ], + [ + "gene_synonym", + "GeneID:946070" + ], + [ + "gene_synonym", + "JW1505" + ], + [ + "gene_synonym", + "NP_416029.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76141" + ], + [ + "gene_synonym", + "b1512" + ], + [ + "gene_synonym", + "lsrR" + ], + [ + "gene_synonym", + "ydeW" + ] + ], + "dna_sequence": 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"functions": [ + "lsr operon transcriptional repressor" + ], + "id": "CDS_1498", + "location": [ + [ + "NC_000913", + 1601241, + "-", + 954 + ] + ], + "md5": "792d96a4d3fb71f855a24dfbb3130beb", + "parent_gene": "", + "protein_md5": "3c73933c9d6e747ef6c5b84b70ff8e1b", + "protein_translation": "MTINDSAISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGIIRVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRLGIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIGQLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGAVGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAILRS", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005056" + ], + [ + "gene_synonym", + "ECK1506" + ], + [ + "gene_synonym", + "EcoGene:EG13806" + ], + [ + "gene_synonym", + "GI:16129472" + ], + [ + "gene_synonym", + "GeneID:945680" + ], + [ + "gene_synonym", + "JW1506" + ], + [ + "gene_synonym", + "NP_416030.1" + ], + [ + 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"gene_synonym", + "JW1532" + ], + [ + "gene_synonym", + "NP_416057.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39831" + ], + [ + "gene_synonym", + "b1539" + ], + [ + "gene_synonym", + "ydfG" + ] + ], + "dna_sequence": "ATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCGCCACTGGCCGTCGCCAGGAACGGTTGCAGGAGTTAAAAGACGAACTGGGAGATAATCTGTATATCGCCCAACTGGACGTTCGCAACCGCGCCGCTATTGAAGAGATGCTGGCATCGCTTCCTGCCGAGTGGTGCAATATTGATATCCTGGTAAATAATGCCGGCCTGGCGTTGGGCATGGAGCCTGCGCATAAAGCCAGCGTTGAAGACTGGGAAACGATGATTGATACCAACAACAAAGGCCTGGTATATATGACGCGCGCCGTCTTACCGGGTATGGTTGAACGTAATCATGGTCATATTATTAACATTGGCTCAACGGCAGGTAGCTGGCCGTATGCCGGTGGTAACGTTTACGGTGCGACGAAAGCGTTTGTTCGTCAGTTTAGCCTGAATCTGCGTACGGATCTGCATGGTACGGCGGTGCGCGTCACCGACATCGAACCGGGTCTGGTGGGTGGTACCGAGTTTTCCAATGTCCGCTTTAAAGGCGATGACGGTAAAGCAGAAAAAACCTATCAAAATACCGTTGCATTGACGCCAGAAGATGTCAGCGAAGCCGTCTGGTGGGTGTCAACGCTGCCTGCTCACGTCAATATCAATACCCTGGAAATGATGCCGGTTACCCAAAGCTATGCCGGACTGAATGTCCACCGTCAGTAA", + 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"gene_synonym", + "GeneID:946135" + ], + [ + "gene_synonym", + "JW1579" + ], + [ + "gene_synonym", + "NP_416104.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77374" + ], + [ + "gene_synonym", + "b1587" + ], + [ + "gene_synonym", + "ynfE" + ] + ], + "dna_sequence": 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"EcoGene:EG13189" + ], + [ + "gene_synonym", + "GI:16129564" + ], + [ + "gene_synonym", + "GeneID:949096" + ], + [ + "gene_synonym", + "JW1598" + ], + [ + "gene_synonym", + "NP_416123.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFS3" + ], + [ + "gene_synonym", + "b1606" + ], + [ + "gene_synonym", + "folM" + ], + [ + "gene_synonym", + "ydgB" + ] + ], + "dna_sequence": 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"parent_gene": "", + "protein_md5": "e24b22186b29bbe648b6dc199c53d44b", + "protein_translation": "MGKTQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAIDGLINAGAQCIQADFSTNDGVMAFADEVLKSTHGLRAILHNASAWMAEKPGAPLADVLACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALDNMTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVDYLLTSCFVTGRSFPLDGGRHLR", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005366" + ], + [ + "gene_synonym", + "ECK1602" + ], + [ + "gene_synonym", + "EcoGene:EG13191" + ], + [ + "gene_synonym", + "GI:16129565" + ], + [ + "gene_synonym", + "GeneID:945156" + ], + [ + "gene_synonym", + "JW1599" + ], + [ + "gene_synonym", + "NP_416124.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACX0" + ], + [ + "gene_synonym", + "b1607" + ], + [ + "gene_synonym", + "ydgC" + ] + ], + "dna_sequence": "ATGGGGCTGGTAATCAAAGCCGCGCTCGGTGCGCTGGTAGTGCTGTTGATTGGTGTTTTAGCAAAAACGAAAAATTATTATATCGCCGGGCTGATTCCACTTTTCCCGACCTTTGCGCTTATCGCGCATTATATTGTTGCCAGCGAACGCGGCATTGAAGCCTTACGCGCAACCATCATTTTTAGTATGTGGTCGATTATTCCCTATTTTGTTTACCTGGTGTCGCTGTGGTATTTCACCGGAATGATGCGCTTGCCCGCCGCTTTTGTTGGTTCTGTTGCGTGTTGGGGGATAAGCGCATGGGTGTTGATTATATGCTGGATAAAGCTGCATTAA", + "dna_sequence_length": 336, + "functions": [ + "GlpM family inner membrane protein" + ], + "id": "CDS_1596", + "location": [ + [ + "NC_000913", + 1682030, + "-", + 336 + ] + ], + "md5": "02eb327c6107427668476cb8c04872e2", + "parent_gene": "", + "protein_md5": "b0b97b1fafbb337eb59c86e55531e4ce", + "protein_translation": "MGLVIKAALGALVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHYIVASERGIEALRATIIFSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWVLIICWIKLH", + "protein_translation_length": 111, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005370" + ], + [ + "gene_synonym", + "ECK1603" + ], + [ + "gene_synonym", + "EcoGene:EG13190" + ], + [ + "gene_synonym", + "GI:145698268" + ], + [ + "gene_synonym", + "GeneID:946199" + ], + [ + "gene_synonym", + "JW1600" + ], + [ + "gene_synonym", + "NP_416125.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52108" + ], + [ + "gene_synonym", + "b1608" + ], + [ + "gene_synonym", + "rstA" + ], + [ + "gene_synonym", + "urpT" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16129568" + ], + [ + "gene_synonym", + "GeneID:945135" + ], + [ + "gene_synonym", + "JW1602" + ], + [ + "gene_synonym", + "NP_416127.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16525" + ], + [ + "gene_synonym", + "b1610" + ], + [ + "gene_synonym", + "tau" + ], + [ + "gene_synonym", + "tus" + ] + ], + "dna_sequence": 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replication at Ter, DNA-binding protein" + ], + "id": "CDS_1599", + "location": [ + [ + "NC_000913", + 1684259, + "+", + 930 + ] + ], + "md5": "a3a785324053b7e09fb092dbb00fe46a", + "parent_gene": "", + "protein_md5": "ed59bcb1634167857e53e941bd9f3c73", + "protein_translation": "MARYDLVDRLNTTFRQMEQELAIFAAHLEQHKLLVARVFSLPEVKKEDEHNPLNRIEVKQHLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQVDNLSQAALVSHIQHINKLKTTFEHIVTVESELPTAARFEWVHRHLPGLITLNAYRTLTVLHDPATLRFGWANKHIIKNLHRDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQDIAALPQNAKLKIKRPVKVQPIARVWYKGDQKQVQHACPTPLIALINRDNGAGVPDVGELLNYDADNVQHRYKPQAQPLRLIIPRLHLYVAD", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005380" + ], + [ + "gene_synonym", + "ECK1606" + ], + [ + "gene_synonym", + "EcoGene:EG10358" + ], + [ + "gene_synonym", + "GI:16129569" + ], + [ + "gene_synonym", + "GeneID:946147" + ], + [ + "gene_synonym", + "JW1603" + ], + [ + "gene_synonym", + "NP_416128.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05042" + ], + [ + "gene_synonym", + "b1611" + ], + [ + "gene_synonym", + "fumC" + ] + ], + "dna_sequence": 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"EcoGene:EG10356" + ], + [ + "gene_synonym", + "GI:16129570" + ], + [ + "gene_synonym", + "GeneID:946826" + ], + [ + "gene_synonym", + "JW1604" + ], + [ + "gene_synonym", + "NP_416129.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC33" + ], + [ + "gene_synonym", + "b1612" + ], + [ + "gene_synonym", + "fumA" + ] + ], + "dna_sequence": 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"ASAP:ABE-0005398" + ], + [ + "gene_synonym", + "ECK1608" + ], + [ + "gene_synonym", + "EcoGene:EG10566" + ], + [ + "gene_synonym", + "GI:49176125" + ], + [ + "gene_synonym", + "GeneID:944840" + ], + [ + "gene_synonym", + "JW1605" + ], + [ + "gene_synonym", + "NP_416130.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00946" + ], + [ + "gene_synonym", + "b1613" + ], + [ + "gene_synonym", + "manA" + ], + [ + "gene_synonym", + "pmi" + ] + ], + "dna_sequence": "ATGCAAAAACTCATTAACTCAGTGCAAAACTATGCCTGGGGCAGCAAAACGGCGTTGACTGAACTTTATGGTATGGAAAATCCGTCCAGCCAGCCGATGGCCGAGCTGTGGATGGGCGCACATCCGAAAAGCAGTTCACGAGTGCAGAATGCCGCCGGAGATATCGTTTCACTGCGTGATGTGATTGAGAGTGATAAATCGACTCTGCTCGGAGAGGCCGTTGCCAAACGCTTTGGCGAACTGCCTTTCCTGTTCAAAGTATTATGCGCAGCACAGCCACTCTCCATTCAGGTTCATCCAAACAAACACAATTCTGAAATCGGTTTTGCCAAAGAAAATGCCGCAGGTATCCCGATGGATGCCGCCGAGCGTAACTATAAAGATCCTAACCACAAGCCGGAGCTGGTTTTTGCGCTGACGCCTTTCCTTGCGATGAACGCGTTTCGTGAATTTTCCGAGATTGTCTCCCTACTCCAGCCGGTCGCAGGTGCACATCCGGCGATTGCTCACTTTTTACAACAGCCTGATGCCGAACGTTTAAGCGAACTGTTCGCCAGCCTGTTGAATATGCAGGGTGAAGAAAAATCCCGCGCGCTGGCGATTTTAAAATCGGCCCTCGATAGCCAGCAGGGTGAACCGTGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAGCGGTCTGTTCTCCCCGCTATTGCTGAATGTGGTGAAATTGAACCCTGGCGAAGCGATGTTCCTGTTCGCTGAAACACCGCACGCTTACCTGCAAGGCGTGGCGCTGGAAGTGATGGCAAACTCCGATAACGTGCTGCGTGCGGGTCTGACGCCTAAATACATTGATATTCCGGAACTGGTTGCCAATGTGAAATTCGAAGCCAAACCGGCTAACCAGTTGTTGACCCAGCCGGTGAAACAAGGTGCAGAACTGGACTTCCCGATTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGCCAGCAGAGTGCCGCCATTTTGTTCTGCGTCGAAGGCGATGCAACGTTGTGGAAAGGTTCTCAGCAGTTACAGCTTAAACCGGGTGAATCAGCGTTTATTGCCGCCAACGAATCACCGGTGACTGTCAAAGGCCACGGCCGTTTAGCGCGTGTTTACAACAAGCTGTAA", 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"GeneID:946172" + ], + [ + "gene_synonym", + "JW1606" + ], + [ + "gene_synonym", + "NP_416131.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77804" + ], + [ + "gene_synonym", + "b1614" + ], + [ + "gene_synonym", + "ydgA" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG12668" + ], + [ + "gene_synonym", + "GI:90111306" + ], + [ + "gene_synonym", + "GeneID:944820" + ], + [ + "gene_synonym", + "JW1607" + ], + [ + "gene_synonym", + "NP_416132.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47706" + ], + [ + "gene_synonym", + "b1615" + ], + [ + "gene_synonym", + "gusC" + ], + [ + "gene_synonym", + "uidC" + ] + ], + "dna_sequence": "ATGAGAAAAATAGTGGCCATGGCCGTTATTTGCCTGACGGCTGCCTCTGGCCTTACCTCTGCTTATGCGGCGCAACTGGCTGACGATGAAGCGGGACTACGCATCAGACTGAAAAACGAATTGCGCAGGGCGGATAAGCCCAGTGCTGGCGCGGGAAGAGATATTTACGCATGGGTACAGGGAGGATTGCTCGATTTCAATAGTGGTTATTATTCCAATATTATTGGCGTTGAAGGCGGGGCGTATTATGTTTATAAATTAGGTGCTCGTGCTGATATGAGTACCCGGTGGTATCTTGATGGTGATAAAAGTTTTGGCTTTGCCCTGGGGGCAGTAAAAATAAAACCCAGTGAAAATAGCCTGCTTAAATTAGGTCGCTTCGGGACGGATTATAGTTATGGTAGCTTACCTTATCGTATTCCGTTAATGGCTGGCAGTTCGCAACGTACATTACCGACAGTTTCTGAAGGAGCATTAGGTTATTGGGCTTTAACACCAAATATTGATCTGTGGGGAATGTGGCGTTCACGAGTATTTTTATGGACTGATTCAACAACCGGTATTCGTGATGAAGGGGTGTATAACAGCCAGACGGGAAAATACGATAAACATCGCGCACGTTCTTTTTTAGCCGCCAGTTGGCATGATGATACCAGTCGCTATTCTCTGGGGGCATCGGTACAGAAAGATGTTTCCAATCAGATACAAAGTATTCTCGAGAAAAGCATACCGCTCGACCCGAATTATACGTTGAAAGGGGAGTTGCTCGGCTTTTACGCGCAGCTCGAAGGTTTAAGTCGTAATACCAGCCAGCCCAATGAAACGGCGTTGGTTAGTGGACAATTGACCTGGAATGCGCCGTGGGGAAGTGTATTTGGCAGTGGTGGTTATTTGCGCCATGCAATGAATGGTGCCGTGGTGGATACCGACATTGGCTATCCCTTTTCATTAAGTCTTGATCGTAACCGTGAAGGAATGCAGTCCTGGCAATTGGGCGTCAACTATCGTTTAACGCCGCAATTTACGCTGACATTTGCACCGATTGTGACTCGCGGCTATGAATCCAGTAAACGAGATGTGCGGATTGAAGGCACGGGTATCTTAGGTGGTATGAACTATCGGGTCAGCGAAGGGCCGTTACAAGGGATGAATTTCTTTCTTGCTGCCGATAAAGGGCGGGAAAAGCGCGATGGCAGTACGCTGGGCGATCGCCTGAATTACTGGGATGTGAAAATGAGTATTCAGTATGACTTTATGCTGAAGTAA", 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"gene_synonym", + "GI:16129574" + ], + [ + "gene_synonym", + "GeneID:947484" + ], + [ + "gene_synonym", + "JW1608" + ], + [ + "gene_synonym", + "NP_416133.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE44" + ], + [ + "gene_synonym", + "b1616" + ], + [ + "gene_synonym", + "gusB" + ], + [ + "gene_synonym", + "uidB" + ], + [ + "gene_synonym", + "uidP" + ] + ], + "dna_sequence": "ATGAATCAACAACTCTCCTGGCGCACCATCGTCGGCTACAGCCTCGGTGACGTCGCCAATAACTTCGCCTTCGCAATGGGGGCGCTCTTCCTGTTGAGTTACTACACCGACGTCGCTGGCGTCGGTGCCGCTGCGGCGGGCACCATGCTGTTACTGGTGCGGGTATTCGATGCCTTCGCCGACGTCTTTGCCGGACGAGTGGTGGACAGTGTGAATACCCGCTGGGGAAAATTCCGCCCGTTTTTACTCTTCGGTACTGCGCCGTTAATGATCTTCAGCGTGCTGGTATTCTGGGTGCTGACCGACTGGAGCCATGGTAGCAAAGTGGTGTATGCATATTTGACCTACATGGGCCTCGGGCTTTGCTACAGCCTGGTGAATATTCCTTATGGTTCACTTGCTACCGCGATGACCCAACAACCACAATCCCGCGCCCGTCTGGGCGCGGCTCGTGGGATTGCCGCTTCATTGACCTTTGTCTGCCTGGCATTTCTGATAGGACCGAGCATTAAGAACTCCAGCCCGGAAGAGATGGTGTCGGTATACCATTTCTGGACAATTGTGCTGGCGATTGCCGGAATGGTGCTTTACTTCATCTGCTTCAAATCGACGCGTGAGAATGTGGTACGTATCGTTGCGCAGCCGTCATTGAATATCAGTCTGCAAACCCTGAAACGGAATCGCCCGCTGTTTATGTTGTGCATCGGTGCGCTGTGTGTGCTGATTTCGACCTTTGCGGTCAGCGCCTCGTCGTTGTTCTACGTGCGCTATGTGTTAAATGATACCGGGCTGTTCACTGTGCTGGTACTGGTGCAAAACCTGGTTGGTACTGTGGCATCGGCACCGCTGGTGCCGGGGATGGTCGCGAGGATCGGTAAAAAGAATACCTTCCTGATTGGCGCTTTGCTGGGAACCTGCGGTTATCTGCTGTTCTTCTGGGTTTCCGTCTGGTCACTGCCGGTGGCGTTGGTTGCGTTGGCCATCGCTTCAATTGGTCAGGGCGTTACCATGACCGTGATGTGGGCGCTGGAAGCTGATACCGTAGAATACGGTGAATACCTGACCGGCGTGCGAATTGAAGGGCTCACCTATTCACTATTCTCATTTACCCGTAAATGCGGTCAGGCAATCGGAGGTTCAATTCCTGCCTTTATTTTGGGGTTAAGCGGATATATCGCCAATCAGGTGCAAACGCCGGAAGTTATTATGGGCATCCGCACATCAATTGCCTTAGTACCTTGCGGATTTATGCTACTGGCATTCGTTATTATCTGGTTTTATCCGCTCACGGATAAAAAATTCAAAGAAATCGTGGTTGAAATTGATAATCGTAAAAAAGTGCAGCAGCAATTAATCAGCGATATCACTAATTAA", + "dna_sequence_length": 1374, + "functions": [ + "glucuronide transporter" + ], + "id": "CDS_1605", + "location": [ + [ + "NC_000913", + 1694263, + "-", + 1374 + ] + ], + "md5": "0777bf53df6ff8c46bdc4ef10472e0e9", + "parent_gene": "", + "protein_md5": "7582ee621638d65139cf1e0ea57b5e5a", + "protein_translation": "MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVLTDWSHGSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLNISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDNRKKVQQQLISDITN", + "protein_translation_length": 457, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005410" + ], + [ + "gene_synonym", + "ECK1612" + ], + [ + "gene_synonym", + "EcoGene:EG11055" + ], + [ + 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"ydhK" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW5874" + ], + [ + "gene_synonym", + "NP_416166.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67430" + ], + [ + "gene_synonym", + "b1649" + ], + [ + "gene_synonym", + "nemR" + ], + [ + "gene_synonym", + "ydhM" + ] + ], + "dna_sequence": "ATGAACAAACACACCGAACATGATACTCGCGAACATCTCCTGGCGACGGGCGAGCAACTTTGCCTGCAACGTGGATTCACCGGGATGGGGCTAAGCGAATTACTAAAAACCGCTGAAGTGCCGAAAGGGTCCTTCTATCACTACTTTCGCTCTAAAGAAGCGTTTGGCGTTGCCATGCTTGAGCGTCATTACGCCGCATATCACCAGCGACTGACTGAGTTGCTGCAATCCGGCGAAGGTAACTACCGCGACCGCATACTGGCTTATTACCAGCAAACACTGAACCAGTTTTGCCAACATGGAACCATCAGTGGTTGCCTGACAGTAAAACTCTCTGCCGAAGTGTGCGATCTGTCAGAAGATATGCGCAGCGCGATGGATAAAGGTGCTCGCGGCGTGATCGCCCTGCTCTCTCAGGCGCTGGAAAATGGCCGTGAGAACCATTGTTTAACCTTTTGTGGCGAACCGCTGCAACAGGCACAAGTGCTTTACGCACTGTGGCTTGGCGCGAATCTGCAGGCCAAAATTTCGCGCAGTTTCGAGCCACTGGAAAACGCGCTGGCCCATGTAAAAAACATTATTGCGACGCCTGCCGTTTAG", + "dna_sequence_length": 600, + "functions": [ + "transcriptional repressor for the nemRA-gloA operon, quinone-, glyoxal-, and 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"ASAP:ABE-0005632" + ], + [ + "gene_synonym", + "ECK1684" + ], + [ + "gene_synonym", + "EcoGene:EG13969" + ], + [ + "gene_synonym", + "GI:16129643" + ], + [ + "gene_synonym", + "GeneID:946189" + ], + [ + "gene_synonym", + "JW1677" + ], + [ + "gene_synonym", + "NP_416202.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77748" + ], + [ + "gene_synonym", + "b1687" + ], + [ + "gene_synonym", + "ydiJ" + ] + ], + "dna_sequence": 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"MNAYELQALRHIFAMTIDECATWIAQTGDSESWRQWENGKCAIPDRVVEQLLAMRQQRKKHLHAIIEKINNRIGNNTMRFFPDLTAFQRVYPDGNFIDWKIYQSVAAELYAHDLERLC", + "protein_translation_length": 118, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005645" + ], + [ + "gene_synonym", + "ECK1688" + ], + [ + "gene_synonym", + "EcoGene:EG13972" + ], + [ + "gene_synonym", + "GI:16129646" + ], + [ + "gene_synonym", + "GeneID:946196" + ], + [ + "gene_synonym", + "JW1680" + ], + [ + "gene_synonym", + "NP_416205.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76197" + ], + [ + "gene_synonym", + "b1690" + ], + [ + "gene_synonym", + "ydiM" + ] + ], + "dna_sequence": 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"location": [ + [ + "NC_000913", + 1773789, + "+", + 867 + ] + ], + "md5": "a276dd09d71a43af48848cfb0fa2adf7", + "parent_gene": "", + "protein_md5": "7aefe9d44cfe2be509938a25c6cc7fee", + "protein_translation": "MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDELTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTKLLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVMGFGA", + "protein_translation_length": 288, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005653" + ], + [ + "gene_synonym", + "ECK1691" + ], + [ + "gene_synonym", + "EcoGene:EG10076" + ], + [ + "gene_synonym", + "GI:16129649" + ], + [ + "gene_synonym", + "GeneID:946210" + ], + [ + "gene_synonym", + "JW1683" + ], + [ + "gene_synonym", + "NP_416208.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05194" + ], + [ + "gene_synonym", + "aroD" + ], + [ + "gene_synonym", + 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"GeneID:945095" + ], + [ + "gene_synonym", + "JW1686" + ], + [ + "gene_synonym", + "NP_416211.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77402" + ], + [ + "gene_synonym", + "b1696" + ], + [ + "gene_synonym", + "ydiP" + ] + ], + "dna_sequence": 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transcriptional regulator" + ], + "id": "CDS_1685", + "location": [ + [ + "NC_000913", + 1779301, + "-", + 912 + ] + ], + "md5": "ffdf30cd111d8064d665de3e49e3fbab", + "parent_gene": "", + "protein_md5": "eeb10359211ecbd77c0faa15f78e866c", + "protein_translation": "MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVSLVG", + "protein_translation_length": 303, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005666" + ], + [ + "gene_synonym", + "ECK1695" + ], + [ + "gene_synonym", + "EcoGene:EG13976" + ], + [ + "gene_synonym", + "GI:16129653" + ], + [ + "gene_synonym", + "GeneID:946482" + ], + [ + "gene_synonym", + "JW5276" + ], + [ + "gene_synonym", + "NP_416212.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76201" + ], + [ + "gene_synonym", + "b1697" + ], + [ + "gene_synonym", + "ydiQ" + ] + ], + "dna_sequence": "ATGAAAATAATAACCTGCTTTAAGCTGGTGCCTGAAGAACAGGACATTGTTGTCACTCCAGAATACACCCTGAATTTCGACAATGCCGACGCCAAAATCAGCCAGTTCGATCTCAATGCCATTGAAGCTGCAAGCCAGCTCGCAACAGATGACGATGAGATAGCCGCGCTGACCGTTGGCGGCTCATTGTTGCAGAACTCGAAAGTGCGCAAAGACGTGCTATCCCGCGGGCCGCACAGCCTGTATTTGGTGCAGGATGCGCAACTTGAACATGCACTGCCTCTCGATACCGCAAAAGCGCTGGCGGCAGCAATTGAAAAGATCGGCTTCGATTTACTGATCTTTGGTGAAGGTTCCGGCGACCTTTATGCCCAGCAGGTTGGCTTGCTGGTCGGAGAAATTCTGCAACTTCCGGTGATTAATGCAGTGAGTGCTATTCAGCGTCAGGGCAATACACTGGTGATTGAACGCACGCTTGAAGATGATGTTGAAGTTATTGAACTCTCTGTTCCAGCCGTGCTCTGCGTCACCTCCGATATTAACGTGCCACGCATTCCTTCGATGAAAGCCATTCTCGGCGCGGGTAAAAAACCGGTAAATCAGTGGCAGGCAAGTGATATTGACTGGAGCCAGAGCGCGCCACTTGCTGAACTGGTCGGCATTCGCGTACCGCCGCAAACAGAACGTAAGCACATCATTATCGATAACGATTCGCCGGAGGCCATTGCCGAGCTGGCGGAACATCTGAAGAAAGCCCTGAACTGA", + "dna_sequence_length": 765, + "functions": [ + "putative electron transfer flavoprotein subunit" + ], + "id": "CDS_1686", + "location": [ + [ + "NC_000913", + 1779617, + "+", + 765 + ] + ], + "md5": "b0bd876e0a350a1348abfcae1c1816a1", + "parent_gene": "", + "protein_md5": "76d7ec9a071eed255b8864d1b7ede0c3", + "protein_translation": "MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAASQLATDDDEIAALTVGGSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALAAAIEKIGFDLLIFGEGSGDLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLEDDVEVIELSVPAVLCVTSDINVPRIPSMKAILGAGKKPVNQWQASDIDWSQSAPLAELVGIRVPPQTERKHIIIDNDSPEAIAELAEHLKKALN", + "protein_translation_length": 254, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005668" + ], + [ + "gene_synonym", + "ECK1696" + ], + [ + "gene_synonym", + "EcoGene:EG13977" + ], + [ + "gene_synonym", + "GI:16129654" + ], + [ + "gene_synonym", + "GeneID:945688" + ], + [ + "gene_synonym", + "JW1688" + ], + [ + "gene_synonym", + "NP_416213.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77378" + ], + [ + "gene_synonym", + "b1698" + ], + [ + "gene_synonym", + "ydiR" + ] + ], + "dna_sequence": "ATGAGTCAATTAAACAGCGTCTGGGTCTTTAGCGATAATCCTGAACGTTATGCTGAACTGTTTGGCGGCGCTCAGCAATGGGGCCAACAGGTGTATGCCATTGTACAAAATACCGACCAGGCGCAGGCAGTTATGCCTTATGGTCCAAAATGTCTTTATGTTCTTGCGCAAAACGACGCGCTGCAACGCACTGAAAATTACGCCGAAAGCATTGCTGCCCTGCTGAAAGATAAACACCCCGCTATGTTGCTGTTGGCCGCGACGAAACGTGGTAAAGCGCTGGCAGCACGGTTAAGTGTGCAACTGAATGCGGCGCTGGTGAACGATGCCACGGCGGTGGATATTGTCGATGGTCACATTTGCGCCGAACACCGGATGTATGGCGGGTTAGCGTTCGCTCAGGAAAAGATCAACAGCCCGCTGGCGATCATTACCCTTGCACCCGGTGTTCAGGAACCGTGCACCAGTGATACCTCTCATCAGTGCCCGACAGAAACGGTACCTTATGTTGCTCCGCGTCATGAAATTCTCTGTCGCGAACGCCGTGCGAAAGCCGCAAGCAGCGTGGACCTGAGCAAAGCAAAACGTGTGGTTGGCGTCGGTCGTGGACTGGCGGCGCAGGATGACCTAAAAATGGTCCACGAACTGGCGGCGGTGCTGAATGCTGAAGTCGGCTGTTCACGTCCAATTGCCGAAGGCGAGAACTGGATGGAGCGTGAACGTTATATCGGTGTCTCCGGCGTGTTGCTGAAATCCGATCTCTACCTGACGCTGGGGATCTCCGGGCAGATCCAGCATATGGTTGGCGGCAACGGCGCAAAAGTGATTGTCGCCATCAATAAAGATAAAAATGCGCCAATCTTCAACTATGCCGACTACGGTCTGGTGGGCGATATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGTTGAGCCGCTAA", + "dna_sequence_length": 939, + "functions": [ + "putative electron transfer flavoprotein, FAD-binding subunit" + ], + "id": "CDS_1687", + "location": [ + [ + "NC_000913", + 1780401, + "+", + 939 + ] + ], + "md5": "51e7705d896d4b6bdd2959b9547895a4", + "parent_gene": "", + "protein_md5": "c2a577597e15da77d3527807221f5bf5", + "protein_translation": "MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTDQAQAVMPYGPKCLYVLAQNDALQRTENYAESIAALLKDKHPAMLLLAATKRGKALAARLSVQLNAALVNDATAVDIVDGHICAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTSDTSHQCPTETVPYVAPRHEILCRERRAKAASSVDLSKAKRVVGVGRGLAAQDDLKMVHELAAVLNAEVGCSRPIAEGENWMERERYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVIVAINKDKNAPIFNYADYGLVGDIYKVVPALISQLSR", + "protein_translation_length": 312, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005671" + ], + [ + "gene_synonym", + "ECK1697" + ], + [ + "gene_synonym", + "EcoGene:EG13978" + ], + [ + "gene_synonym", + "GI:16129655" + ], + [ + "gene_synonym", + "GeneID:946212" + ], + [ + "gene_synonym", + "JW1689" + ], + [ + "gene_synonym", + "NP_416214.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77337" + ], + [ + "gene_synonym", + "b1699" + ], + [ + "gene_synonym", + "ydiS" + ] + ], + "dna_sequence": "ATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGTTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGCCGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGATGTAAAAACATGACCGGCGGGCGTCTTTATGCCCACACACTTGAAGCAATCATTCCAGGCTTTGCAGTATCAGCGCCGGTAGAACGCAAGGTCACACGCGAGAAAATCTCCTTCTTAACCGAAGAAAGCGCCGTTACCCTCGATTTTCACCGCGAGCAGCCAGATGTTCCGCAACACGCATCTTATACCGTATTGCGTAATCGTCTGGACCCGTGGTTGATGGAACAAGCCGAGCAGGCGGGCGCGCAGTTTATCCCAGGCGTTCGCGTCGACGCGCTGGTTCGTGAAGGAAACAAGGTCACTGGCGTGCAGGCTGGGGATGATATTCTCGAAGCGAATGTGGTGATTCTGGCTGATGGCGTTAACTCGATGCTTGGCCGCTCGCTGGGAATGGTTCCCGCTTCCGATCCGCATCATTACGCTGTTGGTGTTAAAGAGGTTATTGGCCTCACACCAGAACAGATCAACGATCGCTTTAATATTACGGGCGAGGAAGGTGCCGCCTGGCTGTTTGCCGGTTCCCCTTCTGACGGCCTGATGGGCGGGGGATTTCTCTATACCAACAAGGATTCCATATCCTTGGGGCTGGTTTGTGGATTGGGTGATATCGCCCATGCGCAAAAAAGCGTGCCGCAAATGCTGGAAGATTTTAAACAACACCCCGCCATTCGCCCGCTGATTAGCGGCGGCAAACTGCTTGAATATTCCGCGCATATGGTGCCGGAAGGCGGTCTGGCAATGGTGCCGCAACTGGTTAACGAGGGCGTGATGATCGTTGGTGACGCCGCAGGCTTCTGCCTGAATTTGGGTTTTACGGTCCGCGGCATGGATTTAGCCATTGCATCGGCTCAGGCTGCCGCCACAACGGTGATCGCCGCCAAAGAACGCGCGGATTTCTCCGCCAGCAGTCTGGCGCAATACAAACGTGAGCTGGAACAAAGCTGCGTCATGCGTGATATGCAGCATTTTCGCAAGATCCCGGCGCTGATGGAAAACCCGCGCCTGTTTAGCCAATACCCACGAATGGTAGCCGACATCATGAACGAGATGTTCACCATCGACGGCAAACCAAACCAGCCGGTACGAAAAATGATCATGGGACATGCGAAGAAAATTGGGCTGATCAACTTGCTGAAAGATGGCATTAAGGGAGCAACCGCGCTATGA", + "dna_sequence_length": 1290, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_1688", + "location": [ + [ + "NC_000913", + 1781395, + "+", + 1290 + ] + ], + "md5": "df670b9b83a40c35d57fe68b28fdd467", + "parent_gene": "", + "protein_md5": "46bf11d88c09549eeb465a498abb02b9", + "protein_translation": "MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNQPVRKMIMGHAKKIGLINLLKDGIKGATAL", + "protein_translation_length": 429, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005674" + ], + [ + "gene_synonym", + "ECK1698" + ], + [ + "gene_synonym", + "EcoGene:EG13979" + ], + [ + "gene_synonym", + "GI:16129656" + ], + [ + "gene_synonym", + "GeneID:946214" + ], + [ + "gene_synonym", + "JW1690" + ], + [ + "gene_synonym", + "NP_416215.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77714" + ], + [ + "gene_synonym", + "b1700" + ], + [ + "gene_synonym", + "ydiT" + ] + ], + "dna_sequence": "ATGAGCCAGAACGCTACGGTTAACGTCGACATCAAATTAGGCGTCAATAAATTCCATGTTGATGAGGGCCACCCGCATATCATTCTGGCGGAAAATCCCGATATCAATGAATTCCATAAATTAATGAAAGCCTGCCCTGCCGGACTTTATAAGCAGGATGACGCAGGAAACATTCATTTTGATTCCGCCGGTTGTCTGGAGTGCGGCACCTGTCGGGTGCTGTGCGGTAACACTATTCTCGAACAGTGGCAATATCCCGCAGGCACCTTCGGTATTGATTTTCGCTACGGCTAA", + "dna_sequence_length": 294, + "functions": [ + "putative 3Fe-4S ferredoxin-type protein" + ], + "id": "CDS_1689", + "location": [ + [ + "NC_000913", + 1782681, + "+", + 294 + ] + ], + "md5": "f5d538a0813e00b2c58c633e7cd15932", + "parent_gene": "", + "protein_md5": "41572006de550b3469e04933f37ec499", + "protein_translation": "MSQNATVNVDIKLGVNKFHVDEGHPHIILAENPDINEFHKLMKACPAGLYKQDDAGNIHFDSAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG", + "protein_translation_length": 97, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005676" + ], + [ + "gene_synonym", + "ECK1699" + ], + [ + "gene_synonym", + "EcoGene:EG12357" + ], + [ + "gene_synonym", + "GI:145698273" + ], + [ + "gene_synonym", + "GeneID:946213" + ], + [ + "gene_synonym", + "JW5910" + ], + [ + "gene_synonym", + "NP_416216.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38135" + ], + [ + "gene_synonym", + "b1701" + ], + [ + "gene_synonym", + "fadK" + ], + [ + "gene_synonym", + "ydiD" + ] + ], + "dna_sequence": "ATGAAAGTGACATTAACGTTTAACGAACAACGTCGTGCGGCGTATCGTCAGCAAGGGTTATGGGGCGATGCTTCGCTGGCCGATTACTGGCAGCAGACCGCTCGTGCGATGCCAGACAAAATTGCCGTGGTCGATAATCATGGTGCATCGTACACCTATAGCGCGCTCGATCACGCCGCGAGCTGTCTGGCAAACTGGATGTTAGCGAAGGGTATTGAATCAGGCGATCGCATCGCATTTCAACTGCCTGGCTGGTGTGAATTTACCGTTATCTATCTTGCCTGCCTGAAAATCGGTGCAGTTTCCGTGCCGCTGTTGCCTTCCTGGCGGGAAGCAGAACTGGTGTGGGTGCTCAATAAGTGTCAGGCAAAAATGTTCTTTGCACCGACGTTGTTTAAACAAACGCGTCCGGTAGATTTAATCCTGCCGCTGCAAAATCAGCTTCCACAACTACAACAAATTGTCGGCGTGGACAAACTGGCTCCCGCCACCTCTTCCCTCTCATTAAGTCAGATTATCGCCGACAATACCTCACTGACCACGGCGATAACGACCCACGGCGATGAATTAGCTGCGGTGCTGTTTACCTCCGGAACCGAGGGTCTGCCAAAGGGCGTGATGCTAACGCATAACAATATTCTCGCCAGTGAGCGGGCTTATTGCGCGCGACTGAATCTGACCTGGCAGGATGTCTTTATGATGCCTGCGCCACTTGGTCACGCAACGGGCTTTCTGCATGGCGTAACGGCACCATTCTTAATTGGCGCTCGCAGCGTGTTGTTAGATATTTTCACTCCTGATGCGTGTCTCGCGCTGCTTGAGCAGCAGCGTTGCACCTGTATGCTCGGCGCAACGCCGTTTGTCTATGATCTTTTGAATGTACTAGAGAAACAACCCGCGGACCTTTCAGCGCTGCGTTTCTTTCTTTGCGGCGGAACCACAATCCCCAAAAAAGTGGCGCGTGAATGCCAGCAGCGCGGCATTAAATTATTAAGTGTTTATGGTTCCACAGAAAGTTCGCCGCATGCGGTGGTGAATCTCGATGATCCTTTGTCGCGCTTTATGCACACCGATGGTTACGCTGCCGCAGGTGTAGAGATTAAAGTGGTCGATGACGCACGCAAGACCTTACCGCCAGGTTGCGAAGGTGAAGAAGCCTCGCGTGGCCCCAATGTGTTTATGGGGTATTTTGATGAACCTGAATTAACCGCCCGTGCCCTGGATGAAGAAGGCTGGTATTACAGCGGCGATCTCTGCCGTATGGATGAGGCTGGCTATATAAAAATTACCGGACGCAAAAAAGATATTATTGTCCGCGGCGGCGAAAATATTAGCAGCCGTGAAGTGGAAGATATTTTATTGCAGCATCCTAAAATTCACGATGCCTGTGTGGTTGCAATGTCCGATGAACGTTTAGGTGAACGATCATGCGCTTATGTCGTGCTGAAAGCGCCGCATCATTCATTATCGCTGGAAGAGGTAGTGGCTTTTTTTAGCCGTAAACGGGTCGCAAAATATAAATATCCTGAACATATCGTGGTAATCGAAAAACTACCGCGAACTACCTCAGGTAAAATACAAAAGTTTTTGTTAAGAAAAGATATTATGCGGCGTTTAACGCAGGATGTCTGTGAAGAGATTGAATAA", 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"ASAP:ABE-0005678" + ], + [ + "gene_synonym", + "ECK1700" + ], + [ + "gene_synonym", + "EcoGene:EG10759" + ], + [ + "gene_synonym", + "GI:16129658" + ], + [ + "gene_synonym", + "GeneID:946209" + ], + [ + "gene_synonym", + "JW1692" + ], + [ + "gene_synonym", + "NP_416217.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23538" + ], + [ + "gene_synonym", + "b1702" + ], + [ + "gene_synonym", + "pps" + ], + [ + "gene_synonym", + "ppsA" + ] + ], + "dna_sequence": 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"MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVSVPNGFATTADAFNQFLDQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQPELENAIREAYAQLSADDENASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAVKHVFASLFNDRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQVVFITSAWGLGEMVVQGAVNPDEFYVHKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHGKQVKIEDVPQEQRDIFSLTNEEVQELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQARPETVRSRGQVMERYTLHSQGKIIAEGRAIGHRIGAGPVKVIHDISEMNRIEPGDVLVTDMTDPDWEPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERMKDGENVTVSCAEGDTGYVYAELLEFSVKSSSVETMPDLPLKVMMNVGNPDRAFDFACLPNEGVGLARLEFIINRMIGVHPRALLEFDDQEPQLQNEIREMMKGFDSPREFYVGRLTEGIATLGAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDEENPMLGFRGAGRYVSDSFRDCFALECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIPSNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVSELFDERNDAVKALLSMAIRAAKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTVVQTWLSLAELKK", + "protein_translation_length": 792, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005682" + ], + [ + "gene_synonym", + "ECK1701" + ], + [ + "gene_synonym", + "EcoGene:EG11132" + ], + [ + "gene_synonym", + "GI:16129659" + ], + [ + "gene_synonym", + "GeneID:946207" + ], + [ + "gene_synonym", + "JW1693" + ], + [ + "gene_synonym", + "NP_416218.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8A4" + ], + [ + "gene_synonym", + "b1703" + ], + [ + "gene_synonym", + "duf299" + ], + [ + "gene_synonym", + "ppsR" + ], + [ + "gene_synonym", + "ydiA" + ] + ], + "dna_sequence": "ATGGATAATGCTGTTGATCGCCACGTTTTTTATATTTCTGATGGTACGGCAATAACTGCGGAGGTATTAGGACACGCAGTAATGTCACAATTTCCCGTCACTATCAGCAGCATCACGCTGCCGTTTGTCGAAAATGAGAGCCGTGCACGGGCAGTGAAGGATCAGATTGACGCAATTTATCACCAGACAGGCGTGCGCCCGCTGGTCTTCTACTCCATCGTGTTGCCGGAGATTCGCGCCATCATCTTGCAAAGTGAAGGCTTTTGCCAGGATATCGTTCAGGCGCTGGTTGCCCCGCTACAACAAGAGATGAAACTGGATCCAACGCCGATTGCTCATCGTACCCATGGCCTTAACCCTAATAATCTCAATAAATATGATGCGCGCATTGCGGCGATTGATTACACCCTCGCCCACGATGACGGCATTTCGTTGCGCAATCTGGACCAGGCTCAGGTGATCCTGCTCGGTGTTTCTCGCTGTGGTAAAACCCCCACCAGTCTGTATCTGGCAATGCAGTTTGGTATCCGCGCGGCAAACTACCCCTTTATTGCCGACGATATGGATAATCTGGTGCTACCCGCGTCGCTCAAACCGCTTCAGCATAAATTGTTCGGCCTGACTATCGACCCGGAACGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTTAGTCGCCGAATGTACTAG", + "dna_sequence_length": 834, + "functions": [ + "PEP synthase kinase and PEP synthase pyrophosphorylase" + ], + "id": "CDS_1692", + "location": [ + [ + "NC_000913", + 1787445, + "+", + 834 + ] + ], + "md5": "2842c2b9af85aba08284ac44354d8d88", + "parent_gene": "", + "protein_md5": "06fae8bc6a882323282c58129bdf9b9e", + "protein_translation": "MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQEMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSRCGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIREERRENSRYASLRQCRMEVAEVEALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRMY", + "protein_translation_length": 277, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005686" + ], + [ + "gene_synonym", + "ECK1702" + ], + [ + "gene_synonym", + "EcoGene:EG10080" + ], + [ + "gene_synonym", + "GI:16129660" + ], + [ + "gene_synonym", + "GeneID:946229" + ], + [ + "gene_synonym", + "JW1694" + ], + [ + "gene_synonym", + "NP_416219.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00887" + ], + [ + "gene_synonym", + "aroH" + ], + [ + "gene_synonym", + "b1704" + ] + ], + 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"ATGAACAGAACTGACGAACTCCGTACTGCGCGTATTGAGAGCCTGGTAACGCCCGCCGAACTCGCGCTACGGTATCCCGTAACGCCTGGCGTCGCCACCCATGTCACCGACTCCCGCCGCAGAATTGAAAAAATACTGAATGGTGAAGATAAGCGACTGTTGGTCATTATTGGCCCCTGCTCGATCCACGATCTCACCGCTGCAATGGAGTACGCCACCCGTCTGCAGTCGCTGCGCAACCAGTACCAGTCACGGCTGGAAATCGTAATGCGCACCTATTTTGAAAAACCACGAACTGTTGTCGGCTGGAAAGGACTAATCTCCGATCCAGATTTAAACGGCAGCTATCGGGTAAATCACGGTCTGGAGCTGGCGCGCAAATTACTTTTACAGGTAAATGAGCTGGGCGTCCCAACCGCGACCGAGTTCCTCGATATGGTGACCGGTCAGTTTATTGCTGATTTAATCAGTTGGGGCGCGATTGGCGCACGTACTACCGAAAGTCAGATCCACCGCGAAATGGCTTCGGCACTCTCCTGTCCGGTAGGTTTTAAAAATGGTACCGATGGCAATACGCGGATTGCTGTGGATGCTATCCGCGCAGCCCGCGCCAGCCATATGTTCCTCTCGCCAGACAAAAATGGTCAGATGACCATCTATCAGACCAGCGGCAACCCGTATGGCCACATTATTATGCGTGGCGGCAAAAAACCGAATTATCATGCCGATGATATCGCCGCAGCCTGCGATACGCTGCACGAGTTTGATTTACCTGAACATCTGGTGGTGGATTTCAGCCACGGTAACTGCCAGAAGCAGCACCGTCGCCAGTTAGAAGTTTGTGAGGATATTTGTCAGCAAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTTCTGA", 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"GeneID:946205" + ], + [ + "gene_synonym", + "JW1695" + ], + [ + "gene_synonym", + "NP_416220.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACX9" + ], + [ + "gene_synonym", + "b1705" + ], + [ + "gene_synonym", + "ydiE" + ] + ], + "dna_sequence": "ATGCGTTATACGGATAGCAGAAAACTCACGCCTGAAACGGATGCCAATCACAAGACCGCTTCCCCGCAGCCTATTCGGCGAATTTCCAGCCAGACACTGTTAGGTCCGGATGGCAAACTGATTATCGATCATGACGGGCAAGAATATCTGCTCCGTAAAACTCAGGCTGGCAAGCTGCTGTTGACCAAGTAG", + "dna_sequence_length": 192, + "functions": [ + "hemin uptake protein HemP homolog" + ], + "id": "CDS_1694", + "location": [ + [ + "NC_000913", + 1789613, + "+", + 192 + ] + ], + "md5": "d8e12559c6ee29ff7e7bb20863e73050", + "parent_gene": "", + "protein_md5": "2aa1c4c849cfdcc5e424b888b95747ca", + "protein_translation": "MRYTDSRKLTPETDANHKTASPQPIRRISSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK", + "protein_translation_length": 63, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005694" + ], + [ + "gene_synonym", + "ECK1704" + ], + [ + "gene_synonym", + "EcoGene:EG13980" + ], + [ + "gene_synonym", + "GI:16129662" + ], + [ + "gene_synonym", + "GeneID:946219" + ], + [ + "gene_synonym", + "JW1696" + ], + [ + "gene_synonym", + "NP_416221.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77649" + ], + [ + "gene_synonym", + "b1706" + ], + [ + "gene_synonym", + "ydiU" + ] + ], + "dna_sequence": "ATGACCCTGTCTTTTGTTACCCGCTGGCGCGATGAATTGCCAGAAACCTATACAGCACTTTCCCCTACGCCTTTAAATAATGCCCGGCTGATTTGGCATAATACCGAACTGGCTAACACGCTGAGTATTCCATCGTCGCTGTTTAAAAATGGCGCAGGTGTCTGGGGCGGCGAAGCCCTACTGCCTGGTATGTCACCACTGGCGCAGGTTTACAGTGGTCATCAGTTCGGCGTCTGGGCGGGCCAACTGGGTGATGGGCGCGGCATTTTACTCGGCGAACAACTGCTTGCTGATGGCACTACAATGGACTGGCATCTGAAAGGTGCTGGCCTGACGCCTTATTCGCGAATGGGTGATGGACGGGCGGTTTTACGTTCGACGATACGAGAAAGTCTCGCCAGTGAGGCGATGCATTATCTGGGCATTCCGACGACCCGCGCGTTAAGTATCGTCACCAGCGATTCGCCAGTGTATCGGGAAACGGCGGAGCCAGGCGCGATGCTGATGCGTGTGGCACCAAGTCATCTGCGCTTTGGTCATTTCGAACATTTTTACTACCGCCGCGAGTCGGAAAAGGTTCGTCAGTTAGCTGACTTTGCTATTCGTCATTACTGGTCACATCTTGCAGATGATGAGGACAAATACCGTCTCTGGTTTAGCGATGTTGTCGCACGTACCGCGTCGTTAATTGCCCAATGGCAGACGGTCGGCTTTGCTCATGGGGTGATGAATACCGACAACATGTCGCTGCTGGGGCTGACGCTTGATTACGGGCCGTTTGGTTTTCTTGATGATTACGAACCCGGTTTTATTTGTAATCACTCGGATCATCAAGGGCGTTACAGCTTTGATAATCAACCTGCCGTCGCGTTGTGGAATTTACAGCGTCTGGCGCAGACATTGTCGCCATTTGTTGCCGTAGATGCCCTGAATGAGGCCCTGGACAGCTATCAGCAGGTTTTGTTGACGCATTATGGAGAACGGATGCGGCAGAAACTGGGCTTCATGACGGAGCAAAAAGAGGATAACGCGCTACTGAATGAATTATTCAGTCTGATGGCGCGAGAGCGCAGCGATTATACCCGCACATTCCGCATGCTGAGTCTGACCGAGCAGCACAGCGCGGCGTCACCGCTACGTGATGAGTTTATTGATCGTGCGGCATTTGATGACTGGTTTGCCCGTTATCGGGGGCGTTTGCAACAAGACGAGGTTAGCGATAGTGAGCGTCAGCAACTGATGCAAAGCGTTAACCCCGCTCTGGTATTGCGCAACTGGTTGGCGCAACGGGCGATTGAAGCGGCAGAAAAGGGTGATATGACGGAATTGCACCGCCTGCATGAGGCGTTGCGAAATCCTTTCAGCGACAGAGATGATGACTATGTCAGTCGTCCACCTGACTGGGGTAAACGGCTGGAAGTCAGCTGCTCGAGTTAA", 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"GI:16129687" + ], + [ + "gene_synonym", + "GeneID:946231" + ], + [ + "gene_synonym", + "JW1722" + ], + [ + "gene_synonym", + "NP_416247.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37794" + ], + [ + "gene_synonym", + "b1733" + ], + [ + "gene_synonym", + "celG" + ], + [ + "gene_synonym", + "chbG" + ], + [ + "gene_synonym", + "ydjC" + ] + ], + "dna_sequence": 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[ + [ + "NC_000913", + 1819447, + "-", + 843 + ] + ], + "md5": "278ef93eed0bdb351ba6d38e5a9190fb", + "parent_gene": "", + "protein_md5": "d8d0320c909ab4012575b41505f8932d", + "protein_translation": "MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ", + "protein_translation_length": 280, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005792" + ], + [ + "gene_synonym", + "ECK1734" + ], + [ + "gene_synonym", + "EcoGene:EG10142" + ], + [ + "gene_synonym", + "GI:16129690" + ], + [ + "gene_synonym", + "GeneID:946244" + ], + [ + "gene_synonym", + "JW1725" + ], + [ + "gene_synonym", + "NP_416250.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69791" + ], + [ + "gene_synonym", + "b1736" + ], + [ + "gene_synonym", + "celC" + ], + [ + "gene_synonym", + "chbA" + ] + ], + "dna_sequence": "ATGATGGATCTCGATAACATTCCCGATACGCAAACGGAAGCTGAAGAGCTGGAAGAAGTGGTGATGGGGCTGATCATCAACTCCGGACAAGCGCGCAGCCTGGCGTATGCGGCACTGAAACAGGCGAAGCAGGGCGATTTTGCCGCAGCAAAAGCCATGATGGATCAGTCACGGATGGCATTGAATGAAGCGCATCTGGTACAGACGAAACTGATTGAAGGCGATGCGGGCGAAGGTAAGATGAAAGTGAGTCTGGTGCTGGTCCACGCTCAGGATCATTTAATGACGTCCATGCTTGCGCGTGAACTGATTACTGAATTAATTGAGCTTCATGAAAAACTGAAGGCATAA", + "dna_sequence_length": 351, + "functions": [ + "N,N'-diacetylchitobiose-specific enzyme IIA component of PTS" + ], + "id": "CDS_1725", + "location": [ + [ + "NC_000913", + 1819805, + "-", + 351 + ] + ], + "md5": "5ba14c77e02b3aac21ab3bb5d3cb293c", + "parent_gene": "", + "protein_md5": "a0de2a6a74b4128dddc5bc89c77b6413", + "protein_translation": "MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAKQGDFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGKMKVSLVLVHAQDHLMTSMLARELITELIELHEKLKA", + "protein_translation_length": 116, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005795" + ], 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"gene_synonym", + "GI:90111325" + ], + [ + "gene_synonym", + "GeneID:946221" + ], + [ + "gene_synonym", + "JW1747" + ], + [ + "gene_synonym", + "NP_416272.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76226" + ], + [ + "gene_synonym", + "b1758" + ], + [ + "gene_synonym", + "ynjF" + ] + ], + "dna_sequence": "GTGCTAGACCGCCATCTTCATCCCCGGATTAAACCGTTGTTGCATCAGTGCGTGCGGGTTCTTGATAAACCGGGCATTACGCCAGATGGTTTAACATTAGTGGGATTTGCCATCGGCGTGCTGGCTCTGCCGTTTCTGGCGCTGGGCTGGTATCTGGCGGCGCTAGTCGTCATTTTGTTGAACAGGCTGCTTGATGGTCTGGACGGTGCGCTGGCGCGGCGCAGAGAGCTTACCGACGCGGGCGGCTTTCTTGATATTTCTCTCGATTTTCTCTTTTACGCGCTGGTGCCGTTTGGCTTTATTCTTGCTGCACCGGAGCAAAATGCGCTGGCAGGCGGCTGGTTGTTGTTTGCGTTTATCGGCACGGGCAGCAGTTTTCTCGCCTTTGCTGCACTGGCAGCAAAACATCAGATTGATAACCCCGGTTATGCACATAAGTCGTTTTACTATCTGGGGGGATTAACCGAAGGCACAGAAACGATCTTACTGTTTGTGCTGGGATGTTTATTCCCTGCATGGTTTGCGTGGTTTGCGTGGATCTTCGGTGCGTTGTGCTGGATGACGACCTTTACGCGGGTGTGGAGTGGGTATCTGACGCTGAAGTCGCTCCAGCGTCAGTAA", + "dna_sequence_length": 621, + "functions": [ + "CDP-alcohol phosphatidyltransferase family inner membrane protein" + ], + "id": "CDS_1747", + "location": [ + [ + "NC_000913", + 1841403, + "-", + 621 + ] + ], + "md5": "eda514aaa066f5c24dc70eeb29420c99", + "parent_gene": "", + "protein_md5": "6e3abafda766d308c0f1db9ded7e5714", + "protein_translation": "MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALPFLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFILAAPEQNALAGGWLLFAFIGTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTETILLFVLGCLFPAWFAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ", + "protein_translation_length": 206, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005855" + ], + [ + "gene_synonym", + "ECK1757" + ], + [ + "gene_synonym", + "EcoGene:EG14009" + ], + [ + "gene_synonym", + "GI:16129713" + ], + [ + "gene_synonym", + "GeneID:946277" + ], + [ + "gene_synonym", + "JW1748" + ], + [ + "gene_synonym", + "NP_416273.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77788" + ], + [ + "gene_synonym", + "b1759" + ], + [ + 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"DUF1496 family protein" + ], + "id": "CDS_1749", + "location": [ + [ + "NC_000913", + 1842135, + "-", + 273 + ] + ], + "md5": "6eb7ec0d9b18d8888386c2e6898bd862", + "parent_gene": "", + "protein_md5": "47b472a80816e3ee4e15e76332c1dc04", + "protein_translation": "MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQPCTQCCVYQDQNYSEGAVIKAEGILLQCQRDDKTLSTNPLVWRRVKP", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005865" + ], + [ + "gene_synonym", + "ECK1759" + ], + [ + "gene_synonym", + "EcoGene:EG10372" + ], + [ + "gene_synonym", + "GI:16129715" + ], + [ + "gene_synonym", + "GeneID:946802" + ], + [ + "gene_synonym", + "JW1750" + ], + [ + "gene_synonym", + "NP_416275.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00370" + ], + [ + "gene_synonym", + "b1761" + ], + [ + "gene_synonym", + "gdhA" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:90111326" + ], + [ + "gene_synonym", + "GeneID:946239" + ], + [ + "gene_synonym", + "JW5288" + ], + [ + "gene_synonym", + "NP_416276.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76228" + ], + [ + "gene_synonym", + "b1762" + ], + [ + "gene_synonym", + "ynjI" + ] + ], + "dna_sequence": 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"ATGCGGTTGTTTATTGCCGAAAAACCGAGTCTGGCGCGCGCCATTGCTGATGTCCTGCCCAAACCGCACCGGAAAGGCGATGGCTTTATCGAGTGCGGTAATGGTCAGGTGGTGACCTGGTGTATCGGTCACCTGCTTGAGCAGGCGCAGCCAGACGCCTACGACAGCCGCTATGCGCGCTGGAATCTTGCGGATTTGCCGATTGTCCCGGAAAAGTGGCAATTACAGCCCCGACCCTCCGTGACCAAACAACTTAACGTCATCAAACGGTTCCTGCATGAAGCCAGCGAAATCGTTCACGCCGGGGACCCGGATCGTGAAGGGCAATTGCTGGTGGATGAAGTGCTGGACTATCTGCAACTGGCACCGGAAAAGCGCCAGCAGGTACAGCGTTGCTTGATAAACGACCTGAACCCGCAGGCGGTTGAGCGGGCGATCGACCGTCTTCGTTCCAACAGTGAGTTTGTACCGCTGTGCGTTTCTGCGCTGGCGCGAGCGCGTGCCGACTGGCTGTACGGCATCAATATGACCCGTGCGTATACCATTCTCGGTCGCAATGCCGGTTATCAGGGCGTACTTTCCGTGGGACGCGTGCAGACGCCCGTGCTTGGGCTGGTGGTGCGCCGCGATGAAGAGATTGAAAACTTCGTGGCGAAAGACTTCTTTGAAGTCAAAGCACATATCGTGACACCTGCCGATGAGCGGTTTACCGCTATCTGGCAACCGAGCGAAGCGTGTGAACCGTACCAGGATGAAGAAGGGCGCTTGTTACATCGTCCACTGGCGGAGCATGTGGTTAACCGCATTAGTGGTCAACCGGCTATTGTCACCAGCTATAACGATAAACGGGAATCAGAATCCGCGCCGCTGCCTTTTTCGCTTTCAGCGTTGCAGATTGAAGCGGCAAAACGTTTTGGTCTGAGTGCGCAGAACGTGCTTGATATCTGCCAGAAACTGTACGAAACGCACAAGCTAATCACTTATCCGCGTTCTGATTGTCGCTATTTGCCAGAAGAACATTTTGCCGGACGCCACGCGGTGATGAATGCCATCAGTGTTCATGCACCGGATCTGTTGCCGCAGCCAGTGGTAGATCCAGATATACGCAACCGCTGTTGGGATGACAAAAAGGTCGATGCGCACCACGCCATCATTCCGACCGCACGGAGTTCTGCGATCAACCTGACGGAGAACGAAGCGAAGGTCTATAACCTGATTGCCCGTCAGTATCTGATGCAATTCTGCCCGGATGCGGTGTTCCGCAAGTGTGTTATCGAACTGGACATTGCCAAAGGCAAATTTGTCGCTAAAGCGCGTTTTCTTGCTGAAGCAGGCTGGCGCACGCTGTTAGGCAGCAAAGAGCGCGATGAAGAAAACGACGGCACGCCACTGCCTGTGGTGGCGAAAGGCGATGAGTTGCTGTGTGAAAAAGGTGAAGTGGTAGAGCGGCAAACCCAGCCGCCGCGCCATTTTACCGATGCAACACTGCTTTCGGCGATGACCGGGATCGCGCGCTTTGTGCAGGATAAAGATCTGAAAAAGATCCTCCGTGCGACCGATGGTCTGGGGACAGAGGCAACGCGTGCCGGGATTATTGAACTGTTGTTCAAGCGTGGTTTCCTGACCAAAAAAGGGCGCTATATCCACTCCACCGACGCCGGAAAAGCGCTATTCCATTCGCTGCCGGAGATGGCGACGCGACCGGACATGACCGCGCACTGGGAATCGGTGCTGACGCAAATCAGCGAAAAGCAGTGTCGCTATCAGGACTTTATGCAGCCGCTGGTGGGGACGCTATATCAGCTTATTGATCAAGCCAAACGTACGCCGGTGCGGCAGTTTCGCGGCATTGTGGCTCCGGGCAGTGGTGGCAGTGCTGATAAGAAAAAGGCTGCACCGCGTAAACGTAGTGCGAAAAAAAGTCCGCCAGCAGATGAAGTCGGAAGCGGGGCGATAGCGTAA", 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], + [ + "gene_synonym", + "NP_416279.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACY1" + ], + [ + "gene_synonym", + "b1765" + ], + [ + "gene_synonym", + "ydjA" + ] + ], + "dna_sequence": "ATGGATGCACTCGAACTATTGATCAATCGCCGTAGCGCCTCCCGCTTGGCTGAACCCGCGCCAACGGGTGAACAACTGCAAAACATCCTGCGTGCGGGTATGCGTGCGCCGGACCATAAGTCCATGCAACCGTGGCATTTTTTTGTGATTGAAGGGGAAGGGCGCGAGCGTTTCAGCGCCGTACTGGAACAGGGGGCGATTGCTGCCGGTAGTGATGACAAAGCTATCGACAAAGCCCGTAATGCGCCGTTCCGCGCACCGCTCATCATCACGGTGGTGGCGAAATGCGAAGAGAATCATAAAGTCCCGCGCTGGGAACAGGAAATGTCTGCCGGATGCGCGGTCATGGCGATGCAAATGGCAGCAGTTGCCCAGGGGTTTGGCGGCATCTGGCGCAGTGGCGCATTAACTGAAAGTCCGGTAGTGCGTGAAGCATTCGGTTGCCGTGAGCAGGATAAAATTGTCGGTTTTCTCTACCTCGGTACGCCGCAGCTGAAAGCATCTACGTCGATTAACGTCCCGGACCCGACGCCGTTTGTAACTTATTTCTGA", + "dna_sequence_length": 552, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_1754", + "location": [ + [ + "NC_000913", + 1848676, + "-", + 552 + ] + ], + "md5": "c0ffd2e483c09e31c3671340cab0c05e", + "parent_gene": "", + 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"ATGCGAACCCTTTGGCGATTTATTGCCGGATTTTTTAAATGGACGTGGCGTCTGCTGAATTTCGTCCGTGAAATGGTACTTAACCTGTTCTTTATTTTCCTCGTACTGGTTGGTGTGGGGATTTGGATGCAGGTCAGTGGTGGTGATTCGAAAGAAACGGCCAGTCGTGGCGCACTGCTGCTGGACATTTCTGGTGTGATCGTCGATAAACCCGACAGTTCTCAGCGGTTTAGTAAATTAAGCCGCCAGCTGCTTGGTGCCAGTTCCGATCGTCTGCAGGAAAACTCACTGTTTGATATCGTCAACACTATTCGCCAGGCGAAGGACGACCGCAATATCACCGGTATTGTGATGGATCTGAAAAACTTCGCAGGCGGCGACCAACCGTCTATGCAGTACATCGGCAAAGCTCTGAAAGAGTTTCGTGACAGCGGGAAACCGGTTTATGCCGTTGGCGAGAACTACAGCCAGGGGCAATATTATCTCGCCAGTTTCGCCAATAAAATTTGGCTGTCTCCGCAAGGCGTGGTTGATCTGCACGGCTTTGCCACCAACGGTCTGTACTACAAATCGTTGCTGGATAAGCTGAAAGTTTCCACCCATGTGTTCCGCGTGGGTACGTATAAATCTGCCGTTGAACCGTTTATTCGTGATGATATGTCACCGGCAGCCCGCGAAGCTGACAGCCGCTGGATTGGTGAGCTGTGGCAAAACTATCTGAATACTGTTGCCGCTAACCGGCAGATCCCTGCTGAGCAGGTATTCCCTGGCGCGCAAGGGTTGCTTGAGGGTTTAACCAAAACCGGTGGCGATACCGCGAAATATGCACTGGAAAACAAGCTGGTCGATGCACTGGCATCGAGTGCGGAAATCGAAAAAGCACTGACCAAAGAATTCGGCTGGAGTAAGACTGATAAAAATTATCGCGCCATCAGTTATTACGATTACGCATTGAAAACGCCGGCAGATACCGGTGACAGCATCGGTGTCGTCTTTGCTAATGGCGCAATTATGGATGGCGAGGAAACTCAGGGGAATGTTGGCGGTGATACCACTGCGGCACAAATCCGCGACGCTCGCCTTGACCCGAAAGTGAAAGCGATTGTCCTGCGTGTTAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGGATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCTCGGGGATTTCGATGATGCGGTCGCCAAAGCAGCAGAGCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACAAAGTGATGGACAACATGTCTGGTTCTGTCCGGGCAATGTTGCCAGATGCGTTCCAGGCCATGTTACCTGCACCGCTGGCCTCGGTAGCCTCTACCGTTAAAAGTGAAAGTGACAAGCTGGCCGCGTTTAATGACCCACAAAACCGTTATGCGTTTTGCCTGACCTGCGCCAACATGCGTTAA", 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"gene_synonym", + "JW5290" + ], + [ + "gene_synonym", + "NP_416289.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76230" + ], + [ + "gene_synonym", + "b1775" + ], + [ + "gene_synonym", + "ydjK" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "yeaE" + ] + ], + "dna_sequence": "ATGCAACAAAAAATGATTCAATTTAGTGGCGATGTCTCACTGCCAGCCGTAGGGCAGGGAACATGGTATATGGGCGAAGATGCCAGTCAGCGCAAAACAGAAGTTGCTGCACTACGCGCGGGCATTGAACTCGGTTTAACCCTCATTGATACCGCCGAAATGTATGCCGATGGCGGTGCCGAAAAGGTGGTTGGGGAAGCATTAACCGGTCTGCGAGAGAAGGTCTTTCTCGTCTCTAAAGTCTATCCGTGGAATGCTGGCGGGCAAAAAGCGATAAATGCATGCGAAGCCAGTTTACGCCGTCTCAATACTGATTATCTCGATCTTTACTTATTACACTGGTCTGGCAGTTTCGCTTTTGAAGAGACTGTCGCAGCGATGGAAAAATTGATCGCCCAGGGAAAAATCCGCCGCTGGGGCGTTTCTAACCTTGATTATGCTGATATGCAGGAACTCTGGCAGCTGCCGGGGGGAAATCAGTGTGCCACTAATCAGGTGCTTTACCATCTCGGTTCACGAGGAATTGAGTACGATCTACTCCCCTGGTGCCAGCAACAGCAGATGCCGGTGATGGCTTACAGTCCGTTAGCCCAGGCCGGGCGGTTGCGCAATGGACTGTTAAAAAACGCGGTAGTCAACGAAATTGCACATGCTCACAATATCAGCGCGGCACAAGTATTGTTGGCGTGGGTGATCAGTCATCAGGGTGTGATGGCGATTCCAAAAGCGGCCACGATTGCCCATGTCCAACAAAATGCGGCTGTGCTTGAGGTCGAACTTTCTTCAGCGGAATTAGCTATGCTGGATAAGGCATATCCGGCACCAAAAGGAAAAACTGCGCTGGATATGGTGTGA", + "dna_sequence_length": 855, + "functions": [ + "aldo-keto reductase, methylglyoxal to acetol, NADPH-dependent" + ], + "id": "CDS_1770", + "location": [ + [ + "NC_000913", + 1865636, + "-", + 855 + ] + ], + "md5": "a6c4f3d5aed6f1d76a1d76824a2bb665", + "parent_gene": "", + "protein_md5": "e7680b763945dee83ec1dd7660258d1e", + "protein_translation": "MQQKMIQFSGDVSLPAVGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGLREKVFLVSKVYPWNAGGQKAINACEASLRRLNTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQCATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHAHNISAAQVLLAWVISHQGVMAIPKAATIAHVQQNAAVLEVELSSAELAMLDKAYPAPKGKTALDMV", + "protein_translation_length": 284, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005928" + ], + [ + "gene_synonym", + "ECK1780" + ], + [ + "gene_synonym", + "EcoGene:EG13492" + ], + [ + "gene_synonym", + "GI:16129736" + ], + [ + "gene_synonym", + "GeneID:946301" + ], + [ + "gene_synonym", + "JW1771" + ], + [ + "gene_synonym", + "NP_416296.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A908" + ], + [ + "gene_synonym", + "b1782" + ], + [ + "gene_synonym", + "mipA" + ], + [ + "gene_synonym", + "yeaF" + ] + ], + "dna_sequence": "GTGACCAAACTCAAACTTCTGGCACTTGGAGTGCTTATCGCAACGTCTGCAGGCGTAGCGCACGCTGAAGGTAAATTTTCCCTGGGCGCAGGCGTAGGTGTCGTTGAACACCCATATAAAGATTACGATACCGATGTTTACCCAGTACCGGTAATCAACTATGAAGGCGATAACTTCTGGTTCCGTGGCTTAGGTGGTGGTTACTACCTGTGGAATGACGCAACGGATAAACTTTCAATTACCGCTTACTGGTCGCCGCTTTACTTCAAAGCGAAAGACAGTGGCGATCACCAAATGCGTCACCTGGATGACCGTAAGAGCACCATGATGGCTGGTCTGTCTTATGCTCACTTTACCCAGTACGGTTACCTGCGTACCACCCTGGCTGGCGATACCCTGGATAACAGCAACGGCATCGTCTGGGATATGGCCTGGTTGTATCGTTACACCAACGGTGGCCTGACCGTGACTCCGGGTATTGGTGTGCAGTGGAACAGCGAAAACCAGAACGAATACTATTATGGCGTATCGCGCAAAGAGTCCGCTCGCAGCGGTCTGCGTGGCTATAACCCGAACGACAGCTGGAGCCCTTACCTGGAGCTGAGCGCCAGCTACAACTTCCTCGGCGACTGGAGTGTTTACGGTACCGCACGCTACACCCGTCTGTCTGATGAAGTTACTGACAGCCCGATGGTGGATAAATCCTGGACTGGCCTGATTTCTACCGGGATCACCTACAAATTCTGA", + "dna_sequence_length": 747, + "functions": [ + "scaffolding protein for murein synthesizing machinery" + ], + "id": "CDS_1771", + "location": [ + [ + "NC_000913", + 1866472, + "-", + 747 + ] + ], + "md5": "66aaafd6a5bbc36496a62d5e5c0e4ef8", + "parent_gene": "", + "protein_md5": "51b8d2e815ac20348ba0221c0e11f6bb", + "protein_translation": "MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDTDVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHLDDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGIGVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTARYTRLSDEVTDSPMVDKSWTGLISTGITYKF", + "protein_translation_length": 248, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005935" + ], + [ + "gene_synonym", + "ECK1781" + ], + [ + "gene_synonym", + "EcoGene:EG13493" + ], + [ + "gene_synonym", + "GI:16129737" + ], + [ + "gene_synonym", + "GeneID:946297" + ], + [ + "gene_synonym", + "JW1772" + ], + [ + "gene_synonym", + "NP_416297.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACY3" + ], + [ + "gene_synonym", + "b1783" + ], + [ + "gene_synonym", + "yeaG" + ] + ], + "dna_sequence": "ATGAATATATTCGATCACTATCGCCAGCGATATGAAGCTGCCAAGGACGAAGAGTTCACACTGCAGGAGTTTCTTACCACTTGTCGGCAAGATCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTATCTGCTGGGGCCTGTGGGTGGGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCATCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGAACAACCAGGACATCTCCGCGCTGGTTGGGAAAGTCGATATTCGTAAACTCGAACACTACGCGCAGAATGACCCGGACGCCTACGGCTATTCCGGTGCGCTGTGCCGCGCCAATCAGGGGATCATGGAATTCGTTGAGATGTTTAAAGCACCGATTAAAGTGCTGCATCCCTTGTTAACCGCCACTCAGGAAGGTAACTACAACGGGACGGAAGGTATCTCCGCCCTGCCGTTCAACGGGATTATTCTCGCACACTCGAACGAGTCCGAATGGGTCACTTTCCGTAATAACAAAAACAACGAAGCCTTCCTCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCGTATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTGTCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCAAAGAGATCCAGACGGCCTACCTTGAATCCTATTCCGAATATGGGCAAAACATTTTCGACCGTTATGTTACCTACGCGGATTTCTGGATTCAGGATCAGGAGTATCGCGATCCGGATACCGGGCAGCTGTTTGACCGCGAGTCTCTTAACGCCGAGCTGGAGAAAATCGAGAAACCGGCGGGGATCAGTAATCCAAAAGATTTCCGCAACGAGATTGTTAACTTCGTACTGCGCGCCAGAGCGAATAACAGCGGACGCAATCCGAACTGGACCAGCTATGAAAAACTGCGCACGGTCATCGAGAAGAAAATGTTCTCCAATACCGAGGAGCTGTTGCCGGTTATCTCGTTTAACGCCAAAACGTCAACCGACGAGCAGAAGAAACACGACGACTTTGTCGACCGTATGATGGAAAAAGGCTACACCCGTAAACAGGTGCGTTTACTGTGCGAATGGTATTTGCGCGTACGTAAATCGTCTTAA", + "dna_sequence_length": 1935, + "functions": [ + "protein kinase, endogenous substrate unidentified", + "autokinase" + ], + "id": "CDS_1772", + "location": [ + [ + "NC_000913", + 1866908, + "+", + 1935 + ] + ], + "md5": "bad858554c4f0206921e44793957f822", + "parent_gene": "", + "protein_md5": "7d791ccfa3356359facd9673f209c23a", + "protein_translation": "MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLMAIGEPVMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEKKQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQILEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDENNQDISALVGKVDIRKLEHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLLTATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLRISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGESLKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVLEQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVTYADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARANNSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKGYTRKQVRLLCEWYLRVRKSS", + "protein_translation_length": 644, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005938" + ], + [ + "gene_synonym", + "ECK1782" + ], + [ + "gene_synonym", + "EcoGene:EG13494" + ], + [ + "gene_synonym", + "GI:16129738" + ], + [ + "gene_synonym", + "GeneID:946296" + ], + [ + "gene_synonym", + "JW1773" + ], + [ + "gene_synonym", + "NP_416298.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76235" + ], + [ + "gene_synonym", + "b1784" + ], + [ + "gene_synonym", + "yeaH" + ] + ], + "dna_sequence": "ATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCGATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCGACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGAGTATCTTGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATCAGCGTTGTGCGTTCATTGCAGAACTCACTGGCGCGACGCACAGCCATGACGGCAGGCAAGCGGCGGGAACTTCATGCACTGGAAGAGAATTTGGCCATCATCAGCAACAGTGAACCTGCGCAACTGCTGGAAGAGGAACGTCTGCGCAAAGAAATTGCAGAATTACGTGCCAAAATTGAACGCGTCCCTTTTATTGACACCTTCGATTTACGTTACAAGAACTACGAGAAGCGGCCCGATCCCTCCAGCCAGGCAGTGATGTTTTGCCTGATGGACGTTTCCGGTTCAATGGATCAATCCACTAAAGATATGGCTAAGCGTTTTTATATTCTGCTGTATCTGTTCCTCAGCAGAACGTATAAGAACGTGGAAGTCGTATACATCCGCCATCATACCCAGGCGAAAGAAGTCGATGAACATGAGTTTTTCTACTCGCAGGAAACAGGCGGCACCATTGTTTCCAGCGCCCTGAAACTGATGGATGAGGTAGTGAAAGAGCGTTATAACCCGGCACAGTGGAATATTTACGCTGCACAAGCATCGGACGGCGATAACTGGGCCGATGACTCTCCGCTTTGCCATGAAATCCTGGCGAAAAAATTATTACCTGTTGTTCGTTATTACAGCTATATCGAAATTACCCGTCGTGCACATCAGACATTGTGGCGAGAATATGAGCATCTGCAATCTACTTTCGACAACTTTGCGATGCAGCACATCCGCGACCAGGATGATATTTATCCGGTGTTCCGTGAACTGTTTCATAAACAAAATGCAACAGCTAAAGGCTAA", + "dna_sequence_length": 1284, + "functions": [ + "UPF0229 family protein" + ], + "id": "CDS_1773", + "location": [ + [ + "NC_000913", + 1868955, + "+", + 1284 + ] + ], + "md5": "78d75825cfc4cdac86a49d7064e08a23", + "parent_gene": "", + "protein_md5": "ba3043f2e2914b147276f033cc5c8740", + "protein_translation": "MTWFIDRRLNGKNKSMVNRQRFLRRYKAQIKQSISEAINKRSVTDVDSGESVSIPTEDISEPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQGQASQDGEGQDEFVFQISKDEYLDLLFEDLALPNLKQNQQRQLTEYKTHRAGYTANGVPANISVVRSLQNSLARRTAMTAGKRRELHALEENLAIISNSEPAQLLEEERLRKEIAELRAKIERVPFIDTFDLRYKNYEKRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILLYLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYNPAQWNIYAAQASDGDNWADDSPLCHEILAKKLLPVVRYYSYIEITRRAHQTLWREYEHLQSTFDNFAMQHIRDQDDIYPVFRELFHKQNATAKG", + "protein_translation_length": 427, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005941" + ], + [ + "gene_synonym", + "ECK1783" + ], + [ + "gene_synonym", + "EcoGene:EG13495" + ], + [ + "gene_synonym", + "GI:16129739" + ], + [ + "gene_synonym", + "GeneID:946366" + ], + [ + "gene_synonym", + "JW1774" + ], + [ + "gene_synonym", + "NP_416299.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76236" + ], + [ + "gene_synonym", + "b1785" + ], + [ + "gene_synonym", + "yeaI" + ] + ], + "dna_sequence": "ATGATTCAGTCAACACGTATTTCCATGGGGTTATTCTTTAAATATTTTTTATCGTTAACGAAAATTGATCCTGGTCAAAACTATATATCTCTGCCATCAATAAAATCCAGCACTCACATTGCTCTCCTTTTTATGGTTTCTATGGGTACACAAAAATTAAAAGCTCAAAGCTTTTTTATTTTCAGTTTATTGCTGACGTTAATTTTATTTTGCATTACTACCTTATATAACGAAAACACAAATGTAAAACTCATCCCACAGATGAATTACCTGATGGTTGTTGTGGCTTTGTTTTTCCTTAACGCCGTCATTTTTCTTTTCATGTTAATGAAATATTTCACTAACAAACAAATTTTACCAACACTCATTTTAAGCCTTGCATTTTTAAGTGGCCTTATCTATTTAGTTGAAACCATTGTAATTATCCATAAACCAATTAACGGCAGTACACTGATCCAGACAAAGTCGAATGATGTTTCTATTTTCTATATTTTCCGCCAACTCAGTTTTATTTGTTTAACCTCGCTGGCGCTCTTTTGTTATGGAAAAGACAACATCCTTGACAACAATAAGAAAAAAACGGGAATCCTGTTGCTGGCGCTGATCCCTTTTTTAGTTTTTCCCCTTCTGGCACACAATCTGAGCAGTTATAACGCTGACTATTCTTTGTATGTCGTCGATTACTGTCCGGACAACCATACTGCGACCTGGGGAATCAACTATACAAAAATATTGGTTTGTCTGTGGGCATTTTTACTGTTCTTTATTATCATGCGCACACGATTAGCCAGCGAACTATGGCCGTTAATAGCATTATTATGTCTGGCATCGCTATGCTGCAACTTACTTCTACTGACTCTGGATGAGTATAATTATACTATCTGGTATATCAGTCGCGGGATTGAAGTTTCCAGTAAACTGTTTGTTGTGTCTTTTCTGATTTATAACATTTTTCAGGAGCTGCAACTCTCCAGCAAACTGGCAGTTCATGATGTGCTGACCAATATTTATAATCGGCGCTACTTTTTCAACAGCGTAGAGTCATTATTGTCGCGACCTGTTGTTAAGGACTTCTGTGTCATGCTGGTTGATATTAATCAGTTCAAACGCATCAATGCCCAATGGGGACATCGTGTGGGTGATAAAGTGCTGGTTTCAATTGTCGATATTATCCAGCAAAGCATCCGCCCCGATGATATTTTAGCGCGACTGGAGGGTGAGGTGTTTGGCTTGCTATTTACCGAACTCAATAGTGCCCAGGCAAAAATCATTGCGGAACGTATGCGTAAAAATGTCGAACTCCTGACCGGCTTTAGTAACAGATATGATGTTCCTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGCAACAAAGTGATTATTCATCATATTTAA", + "dna_sequence_length": 1476, + "functions": [ + "putative membrane-anchored diguanylate cyclase" + ], + "id": "CDS_1774", + "location": [ + [ + "NC_000913", + 1870385, + "+", + 1476 + ] + ], + "md5": "7108c4caa8bff2870757d0e4a2b67e63", + "parent_gene": "", + "protein_md5": "5eda1cb086170e331a3c413e51100b66", + "protein_translation": "MIQSTRISMGLFFKYFLSLTKIDPGQNYISLPSIKSSTHIALLFMVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNAVIFLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVSIFYIFRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYNADYSLYVVDYCPDNHTATWGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLASLCCNLLLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLTNIYNRRYFFNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQQSIRPDDILARLEGEVFGLLFTELNSAQAKIIAERMRKNVELLTGFSNRYDVPEQMTISIGTVFSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI", + "protein_translation_length": 491, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005943" + ], + [ + "gene_synonym", + "ECK1784" + ], + [ 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"ATGAAATTGCACCATAGAATGCTCCGGCATTTTATCGCCGCAAGTGTCATTGTGCTGACATCTTCCTTCCTTATTTTTGAACTTGTCGCCAGCGACAGAGCAATGAGTGCCTATCTGCGCTATATCGTGCAGAAAGCAGACTCCTCCTTTCTTTATGATAAGTATCAGAATCAGAGTATTGCCGCGCATGTGATGCGCGCTCTCGCTGCTGAGCAGTCGGAAGTGTCGCCAGAACAGCGGCGCGCCATCTGCGAGGCTTTTGAGTCTGCCAATAACACCCATGGCTTAAACCTGACTGCCCATAAATACCCGGGCTTACGCGGCACACTACAAACCGCATCCACTGACTGCGACACAATTGTGGAAGCTGCAGCACTATTACCCGCTTTTGATCAGGCAGTGGAAGGCAACCGCCACCAGGATGATTACGGTTCAGGTCTTGGGATGGCCGAAGAGAAATTTCACTATTATCTCGATCTCAATGACCGCTATGTCTATTTTTATGAGCCGGTTAATGTTGAATACTTTGCGATGAATAACTGGTCCTTCCTGCAGTCAGGAAGTATTGGCATCGATCGCAAAGATATTGAAAAGGTATTTACCGGGCGTACCGTATTGTCGAGCATTTACCAGGATCAGCGTACTAAACAGAACGTGATGAGTTTGCTGACGCCGGTATATGTCGCAGGGCAGCTAAAAGGGATTGTGCTGCTGGATATTAACAAAAACAATCTGCGGAATATCTTTTATACTCATGACCGCCCTCTCCTCTGGCGTTTTCTCAATGTCACGCTAACCGATACCGATTCGGGGCGCGACATTATCATCAACCAGAGCGAAGATAATCTGTTCCAGTATGTCAGTTACGTCCATGACTTACCGGGCGGCATTCGTGTCTCGTTATCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAACTGGAGCAGCGGTTGCAGAAACTGGTGCAATCCGGTTCTTCGGTGATGTTTATTGCTATTGACATGGACAAGTTAAAGCAAATAAATGACACCCTCGGTCATCAGGAGGGGGATTTAGCGATTACGTTATTAGCTCAGGCGATTAAACAGTCGATTCGTAAAAGTGATTATGCCATCCGACTCGGTGGCGATGAATTCTGCATCATTCTTGTCGATTCGACGCCGCAAATTGCAGCACAACTGCCTGAACGTATCGAAAAACGTCTGCAACATATCGCGCCGCAGAAAGAGATCGGCTTCTCTTCCGGTATTTACGCGATGAAAGAAAACGATACGTTACATGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAAAAACAGCCGTTCATGA", 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activator of dmlA" + ], + "id": "CDS_1790", + "location": [ + [ + "NC_000913", + 1881809, + "-", + 924 + ] + ], + "md5": "b4e71098c7d8f8461fac5c3eebc26cb1", + "parent_gene": "", + "protein_md5": "672e56be62df4db0b4e7aeebbac33972", + "protein_translation": "MNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLEQTLNVVLLHRTTRRVTITEEGERIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISSFGFGRQVVAPALLALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNYRILCASPEFIAQHGAPKHLTDLSALPCLVIKERDHPFGVWQLRNKEGPHAIKVTGPLSSNHGEIVHQWCLDGQGIALRSWWDVSENIASGHLVQVLPEYYQPANVWAVYVSRLATSAKVRITVEFLRQYFAEHYPNFSLEHA", + "protein_translation_length": 307, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0005991" + ], + [ + "gene_synonym", + "ECK1798" + ], + [ + "gene_synonym", + "EcoGene:EG13507" + ], + [ + "gene_synonym", + "GI:16129754" + ], + [ + "gene_synonym", + "GeneID:946319" + ], + [ + "gene_synonym", + "JW1789" + ], + [ + "gene_synonym", + "NP_416314.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76251" 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"gene_synonym", + "ECK1871" + ], + [ + "gene_synonym", + "EcoGene:EG14033" + ], + [ + "gene_synonym", + "GI:16129823" + ], + [ + "gene_synonym", + "GeneID:946380" + ], + [ + "gene_synonym", + "JW1859" + ], + [ + "gene_synonym", + "NP_416384.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76290" + ], + [ + "gene_synonym", + "b1870" + ], + [ + "gene_synonym", + "cmoA" + ], + [ + "gene_synonym", + "yecO" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_416386.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46923" + ], + [ + "gene_synonym", + "b1872" + ], + [ + "gene_synonym", + "bisZ" + ], + [ + "gene_synonym", + "torZ" + ] + ], + "dna_sequence": 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"GeneID:2847756" + ], + [ + "gene_synonym", + "JW1863" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67826" + ], + [ + "gene_synonym", + "YP_025309.2" + ], + [ + "gene_synonym", + "b1874" + ], + [ + "gene_synonym", + "cutC" + ], + [ + "gene_synonym", + "dinY?" + ] + ], + "dna_sequence": 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"ASAP:ABE-0006268" + ], + [ + "gene_synonym", + "ECK1878" + ], + [ + "gene_synonym", + "EcoGene:EG14316" + ], + [ + "gene_synonym", + "GI:90111353" + ], + [ + "gene_synonym", + "GeneID:946511" + ], + [ + "gene_synonym", + "JW5310" + ], + [ + "gene_synonym", + "NP_416391.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76296" + ], + [ + "gene_synonym", + "b1877" + ], + [ + "gene_synonym", + "yecT" + ] + ], + "dna_sequence": "GTGTTTAAATTTCTTGTATTAACATTAGGCATTATCTCTTGCCAGGCTTACGCAGAAGATACGGTTATAGTAAACGACCATGACATTTCAGCCATCAAAGATTGTTGGCAAAAAAATTCAGATGATGATACTGACGTTAACGTGATCAAATCATGCCTGCGACAAGAATACAATCTCGTCGATGCGCAATTAAATAAAGCCTATGGTGAAGCTTATCGTTATATAGAACAAGTGCCACGCACAGGTGTAAAAAAACCTGATACCGAACAACTTAACTTGCTTAAAAAATCACAGCGAGCCTGGCTGGATTTTAGGGACAAAGAATGTGAATTAATCCTTTCAAATGAGGACGTTCAGGATTTAAGTGACCCTTATTCTGAATCAGAATGGCTCTCATGTATGATCATACAGACCAATACGCGAACTCGCCAGTTGCAGCTATACCGTAACTCTGAAGATTTTTATCCAAGCCCTTTGACAAGAGGATAA", + "dna_sequence_length": 489, + "functions": [ + "uncharacterized protein" 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"gene_synonym", + "ECK1880" + ], + [ + "gene_synonym", + "EcoGene:EG14273" + ], + [ + "gene_synonym", + "GI:16129831" + ], + [ + "gene_synonym", + "GeneID:946390" + ], + [ + "gene_synonym", + "JW1868" + ], + [ + "gene_synonym", + "NP_416393.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76298" + ], + [ + "gene_synonym", + "b1879" + ], + [ + "gene_synonym", + "flaH" + ], + [ + "gene_synonym", + "flhA" + ] + ], + "dna_sequence": 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"MSNLAAMLRLPANLKSTQWQILAGPILILLILSMMVLPLPAFILDLLFTFNIALSIMVLLVAMFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHTGAAAAGKVVEAFGHFLVGGNFAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVINIVGGLLVGVLQHGMSMGHAAESYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQDVGEQMVNQLFSNPSVMLLSAAVLGLLGLVPGMPNLVFLLFTAGLLGLAWWIRGREQKAPAEPKPVKMAENNTVVEATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELLGRIRSIRKKFAQEMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWLAINPGTAAGTLPGEATVDPAFGLNAIWIESALKEQAQIQGYTVVEASTVVATHLNHLISQHAAELFGRQEAQQLLDRVAQEMPKLTEDLVPGVVTLTTLHKVLQNLLDEKVPIRDMRTILETLAEHAPIQSDPHELTAVVRVALGRAITQQWFPGKDEVHVIGLDTPLERLLLQALQGGGGLEPGLADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSRFLRRSLPQLVVLSNLELSDNRHIRMTATIGGK", + "protein_translation_length": 692, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006275" + ], + [ + "gene_synonym", + "ECK1881" + ], + [ + "gene_synonym", + "EcoGene:EG14035" + ], + [ + "gene_synonym", + "GI:16129832" + ], + [ + "gene_synonym", + "GeneID:946391" + ], + [ + "gene_synonym", + "JW1869" + ], + [ + "gene_synonym", + "NP_416394.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76299" + ], + [ + "gene_synonym", + "b1880" + ], + [ + "gene_synonym", + "flaG" + ], + [ + "gene_synonym", + "flhB" + ], + [ + "gene_synonym", + "yecQ" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "GeneID:946396" + ], + [ + "gene_synonym", + "JW1873" + ], + [ + "gene_synonym", + "NP_416398.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07364" + ], + [ + "gene_synonym", + "b1884" + ], + [ + "gene_synonym", + "cheR" + ], + [ + "gene_synonym", + "cheX" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK1887" + ], + [ + "gene_synonym", + "EcoGene:EG10988" + ], + [ + "gene_synonym", + "GI:16129838" + ], + [ + "gene_synonym", + "GeneID:946399" + ], + [ + "gene_synonym", + "JW1875" + ], + [ + "gene_synonym", + "NP_416400.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07017" + ], + [ + "gene_synonym", + "b1886" + ], + [ + "gene_synonym", + "cheM" + ], + [ + "gene_synonym", + "tar" + ] + ], + "dna_sequence": 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"ASAP:ABE-0006292" + ], + [ + "gene_synonym", + "ECK1888" + ], + [ + "gene_synonym", + "EcoGene:EG10149" + ], + [ + "gene_synonym", + "GI:16129839" + ], + [ + "gene_synonym", + "GeneID:946400" + ], + [ + "gene_synonym", + "JW1876" + ], + [ + "gene_synonym", + "NP_416401.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A964" + ], + [ + "gene_synonym", + "b1887" + ], + [ + "gene_synonym", + "cheW" + ] + ], + "dna_sequence": "ATGACCGGTATGACGAATGTAACAAAGCTGGCCAGCGAGCCGTCAGGCCAGGAATTTCTGGTATTTACCCTTGGTGATGAAGAGTACGGTATTGATATCCTGAAAGTGCAGGAGATCCGTGGCTACGATCAGGTAACACGGATTGCGAACACGCCAGCGTTTATCAAAGGCGTCACGAATCTGCGCGGCGTTATTGTGCCGATTGTTGACTTACGAATTAAGTTCAGCCAGGTGGATGTGGACTATAACGACAACACGGTAGTTATCGTCCTGAATCTCGGACAGCGGGTGGTCGGCATCGTGGTTGACGGCGTCTCAGACGTGCTTTCATTGACGGCGGAGCAAATTCGTCCGGCACCGGAATTTGCCGTGACGCTTTCAACAGAATATCTCACTGGACTGGGCGCACTGGGCGACCGGATGTTGATTCTGGTGAACATCGAAAAACTGCTGAACAGCGAAGAGATGGCGCTGTTAGATAGCGCGGCGTCAGAAGTGGCGTAA", + "dna_sequence_length": 504, + "functions": [ + 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"b655b9e362d93c5fd3fada70d38c158f", + "protein_translation": "MSEKSIVQEARDIQLAMELITLGARLQMLESETQLSRGRLIKLYKELRGSPPPKGMLPFSTDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLYLEQCPQAEEGPLLALTRAWTLVRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLCQPPSRAVKRRKLSQNPADIIPQLLDEQRVQAV", + "protein_translation_length": 192, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006303" + ], + [ + "gene_synonym", + "ECK1893" + ], + [ + "gene_synonym", + "EcoGene:EG10320" + ], + [ + "gene_synonym", + "GI:145698279" + ], + [ + "gene_synonym", + "GeneID:945442" + ], + [ + "gene_synonym", + "JW1881" + ], + [ + "gene_synonym", + "NP_416406.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8S9" + ], + [ + "gene_synonym", + "b1892" + ], + [ + "gene_synonym", + "flbB" + ], + [ + "gene_synonym", + "flhD" + ] + ], + "dna_sequence": "ATGCATACCTCCGAGTTGCTGAAACACATTTATGACATCAACTTGTCATATTTACTACTTGCACAGCGTTTGATTGTTCAGGACAAAGCGTCCGCTATGTTTCGTCTCGGCATAAATGAAGAAATGGCGACAACGTTAGCGGCACTGACTCTTCCGCAAATGGTTAAGCTGGCAGAAACCAATCAACTGGTTTGTCACTTCCGTTTTGACAGCCACCAGACGATTACTCAGTTGACGCAAGATTCCCGCGTTGACGATCTCCAGCAAATTCATACCGGCATCATGCTCTCAACACGCTTGCTGAATGATGTTAATCAGCCTGAAGAAGCGCTGCGCAAGAAAAGGGCCTGA", + "dna_sequence_length": 351, + "functions": [ + "flagellar class II regulon transcriptional activator, with FlhC" + ], + "id": "CDS_1885", + "location": [ + [ + "NC_000913", + 1978197, + "-", + 351 + ] + ], + "md5": "299d2e96e523782319df5b511d3d6d75", + "parent_gene": "", + "protein_md5": "7f806aa4d5cc9a3a755ef1ace640419b", + "protein_translation": "MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMATTLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQDSRVDDLQQIHTGIMLSTRLLNDVNQPEEALRKKRA", + "protein_translation_length": 116, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006308" + ], + [ + "gene_synonym", + "ECK0022" + ], + [ + "gene_synonym", + "EcoGene:EG40002" + ], + [ + "gene_synonym", + "GI:16129845" + ], + [ + "gene_synonym", + "GeneID:945867" + ], + [ + "gene_synonym", + "NP_416407.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF30" + ], + [ + "gene_synonym", + "b1893" + ], + [ + "gene_synonym", + "insB1" + ] + ], + "dna_sequence": "ATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGTCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATGGCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAA", + "dna_sequence_length": 504, + "functions": [ + "IS1 transposase B" + ], + "id": "CDS_1886", + "location": [ + [ + "NC_000913", + 1979021, + "-", + 504 + ] + ], + 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"GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAACTGCAGTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAAAATCATTGATATGGCCATGAATGGCGTTGGATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA", + "dna_sequence_length": 276, + "functions": [ + "IS1 repressor TnpA" + ], + "id": "CDS_1887", + "location": [ + [ + "NC_000913", + 1979215, + "-", + 276 + ] + ], + "md5": "db0d756792984c1e534a2dad9bfdde5f", + "parent_gene": "", + "protein_md5": "edc4311bb7ac3cf8e138290b7630fdda", + "protein_translation": "MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR", + "protein_translation_length": 91, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006316" + ], + [ + "gene_synonym", + "ECK1894" + ], + [ + "gene_synonym", + "EcoGene:EG12862" + ], + [ + "gene_synonym", + "GI:16129847" + ], + [ + "gene_synonym", + "GeneID:946404" + ], + [ + "gene_synonym", + "JW1884" + ], + [ + "gene_synonym", + "NP_416409.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46888" + ], + [ + "gene_synonym", + "b1895" + ], + [ + "gene_synonym", + "uspC" + ], + [ + "gene_synonym", + "yecG" + ] + ], + "dna_sequence": "ATGAGCTATAGCAATATTCTTGTCGCTGTTGCGGTTACACCGGAAAGTCAGCAACTGCTGGCAAAAGCGGTATCTATCGCCAGGCCAGTAAAGGGACACATCAGTTTAATTACTCTCGCTTCCGACCCGGAAATGTACAATCAATTAGCTGCGCCGATGCTTGAAGATTTACGCAGCGTGATGCATGAAGAAACGCAAAGCTTTCTTGATAAGTTAATTCAGGATGCGGGGTATCCCGTTGACAAGACGTTTATTGCCTACGGTGAGTTAAGCGAACATATTCTGGAAGTATGTCACAAGCATCATTTCGATTTGGTGATTTGCGGTAATCACAATCACAGTTTCTTTTCGCGAGCATCCTGCTCGGCGAAAAGAGTTATTGCCTCAAGTGAGGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAA", + "dna_sequence_length": 429, + "functions": [ + "universal stress protein" + ], + "id": "CDS_1888", + "location": [ + [ + "NC_000913", + 1979753, + "+", + 429 + ] + ], + "md5": "e9e64593c83dec8cb954cee037a7d9ee", + "parent_gene": "", + "protein_md5": "d3a6fcf02a643e458dc70faef1d65bcb", + 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"ATGCCACTGCATAATTTAACCCGTTTTCCACGGCTGGAGTTTATCGGCGCGCCAACGCCGCTCGAATATCTGCCGCGCTTTTCTGATTATCTAGGACGGGAAATTTTCATCAAACGGGATGACGTCACCCCCATGGCAATGGGCGGCAATAAATTACGTAAGCTGGAATTTCTCGCGGCAGATGCTCTGCGTGAAGGTGCCGATACGCTGATTACTGCCGGGGCGATCCAGTCTAACCATGTGCGGCAGACTGCCGCAGTCGCTGCCAAACTCGGTCTGCACTGCGTGGCGCTGCTGGAAAATCCTATTGGCACAACCGCAGAAAACTATTTAACCAACGGCAATCGCTTGTTGCTGGATCTGTTCAATACCCAGATTGAAATGTGCGACGCACTGACCGATCCCAATGCCCAACTGGAAGAGCTGGCGACGCGAGTCGAAGCACAAGGCTTTCGCCCGTATGTCATTCCGGTTGGCGGTTCTAATGCTCTTGGCGCGCTAGGTTATGTGGAGAGTGCGCTGGAAATCGCGCAACAGTGTGAAGGGGCGGTTAATATTTCATCGGTGGTAGTCGCATCGGGCAGTGCCGGAACTCACGCCGGACTGGCTGTTGGGCTGGAACACCTGATGCCTGAAAGCGAACTGATTGGCGTGACCGTGTCGCGTTCCGTTGCCGATCAATTGCCGAAAGTGGTTAACCTACAACAGGCGATTGCGAAAGAACTGGAGCTGACCGCATCAGCGGAAATTTTACTCTGGGATGACTATTTTGCACCTGGCTACGGCGTGCCGAACGACGAAGGCATGGAAGCAGTGAAATTGCTGGCGCGGCTGGAAGGCATTCTGCTTGATCCTGTGTATACCGGAAAAGCGATGGCGGGGCTGATTGACGGTATCAGTCAGAAACGCTTCAAAGATGAAGGGCCGATTCTGTTTATTCATACCGGCGGTGCGCCTGCGCTGTTCGCCTATCATCCCCACGTTTAG", + 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"MMVQHLKRRPLSRYLKDFKHSQTHCAHCRKLLDRITLVRDGKIVNKIEISRLDTLLDENGWQTEQKSWAALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEMSPGTVREYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTSTNNYRIALRKYQHYQRQTCTRLVQKSSSLPSSDIY", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006396" + ], + [ + "gene_synonym", + "ECK1921" + ], + [ + "gene_synonym", + "EcoGene:EG11355" + ], + [ + "gene_synonym", + "GI:49176170" + ], + [ + "gene_synonym", + "GeneID:948824" + ], + [ + "gene_synonym", + "JW1907" + ], + [ + "gene_synonym", + "NP_416432.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEM6" + ], + [ + "gene_synonym", + "b1922" + ], + [ + "gene_synonym", + "flaD" + ], + [ + "gene_synonym", + "fliA" + ], + [ + "gene_synonym", + "rpoF" + ] + ], + "dna_sequence": 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"uncharacterized protein" + ], + "id": "CDS_1940", + "location": [ + [ + "NC_000913", + 2024823, + "-", + 189 + ] + ], + "md5": "31ddfd23f6836be1959289ef74b2c252", + "parent_gene": "", + "protein_md5": "5972148c0e82168c630cd5564dfe2049", + "protein_translation": "MKVNDRVTVKTDGGPRRPGVVLAVEEFSEGTMYLVSLEDYPLGIWFFNEAGHQDGIFVEKAE", + "protein_translation_length": 62, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006488" + ], + [ + "gene_synonym", + "ECK1951" + ], + [ + "gene_synonym", + "EcoGene:EG14387" + ], + [ + "gene_synonym", + "GI:90111359" + ], + [ + "gene_synonym", + "GeneID:946469" + ], + [ + "gene_synonym", + "JW5317" + ], + [ + "gene_synonym", + "NP_416463.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64519" + ], + [ + "gene_synonym", + "b1953" + ], + [ + "gene_synonym", + "yodD" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76329" + ], + [ + "gene_synonym", + "b1955" + ], + [ + "gene_synonym", + "yedP" + ] + ], + "dna_sequence": "ATGTTTTCAATTCAACAACCACTACTGGTTTTTAGCGATCTTGATGGCACCCTGCTGGACAGTCATAGTTATGACTGGCAACCGGCAGCCCCCTGGCTCACCCGTTTACGCGAAGCAAATGTTCCCGTCATTCTCTGTAGCAGTAAAACATCAGCGGAAATGCTGTACTTGCAAAAAACGTTGGGGCTACAAGGTTTACCGCTGATTGCCGAAAATGGCGCAGTGATCCAGCTTGCTGAGCAATGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCGCCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACAGTTTATGCAGGGTGCGCGCTTCTGGCACGTACTGGATGCTTCTGCCGGAAAAGATCAGGCTGCCAACTGGATTATCGCGACCTATCAACAATTGTCAGGCAAACGCCCAACCACACTTGGCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAA", + 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"MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDDYALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHHALNSTLEISGLRMDSVSHSVSRDNISITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSFVAVKK", + "protein_translation_length": 223, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006537" + ], + [ + "gene_synonym", + "ECK1966" + ], + [ + "gene_synonym", + "EcoGene:EG14046" + ], + [ + "gene_synonym", + "GI:16129916" + ], + [ + "gene_synonym", + "GeneID:946485" + ], + [ + "gene_synonym", + "JW1953" + ], + [ + "gene_synonym", + "NP_416479.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76341" + ], + [ + "gene_synonym", + "b1970" + ], + [ + "gene_synonym", + "hiuH" + ], + [ + "gene_synonym", + "yedX" + ] + ], + "dna_sequence": 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"location": [ + [ + "NC_000913", + 2040483, + "+", + 636 + ] + ], + "md5": "a2cff9751cdf2a869221b7632d5dbe9e", + "parent_gene": "", + "protein_md5": "13b9f39d8eb471e07abed1c450160993", + "protein_translation": "MRLTAKQVTWLKVCLHLAGLLPFLWLVWAINHGGLGADPVKDIQHFTGRTALKFLLATLLITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGVNNLALLGKELITRPYLTLGIISWVILLALAFTSTQAMQRKLGKHWQQLHNFVYLVAILAPIHYLWSVKIISPQPLIYAGLAVLLLALRYKKLRSLFNRLRKQVHNKLSV", + "protein_translation_length": 211, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006546" + ], + [ + "gene_synonym", + "ECK1969" + ], + [ + "gene_synonym", + "EcoGene:EG14049" + ], + [ + "gene_synonym", + "GI:16129919" + ], + [ + "gene_synonym", + "GeneID:946480" + ], + [ + "gene_synonym", + "JW1956" + ], + [ + "gene_synonym", + "NP_416482.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76344" + ], + [ + "gene_synonym", + "b1973" + ], + [ + "gene_synonym", + "yodA" + ], + [ + "gene_synonym", + "zinT" + ] + ], + "dna_sequence": 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"MAIRLYKLAVALGVFIVSAPAFSHGHHSHGKPLTEVEQKAANGVFDDANVQNRTLSDWDGVWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYHKGYATDIEMIGIEDGIVEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPKYIQFSDHIIAPRKSSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006552" + ], + [ + "gene_synonym", + "ECK1970" + ], + [ + "gene_synonym", + "EcoGene:EG14050" + ], + [ + "gene_synonym", + "GI:90111363" + ], + [ + "gene_synonym", + "GeneID:946491" + ], + [ + "gene_synonym", + "JW5323" + ], + [ + "gene_synonym", + "NP_416483.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76345" + ], + [ + "gene_synonym", + "b1974" + ], + [ + "gene_synonym", + "yodB" + ] + ], + "dna_sequence": 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"MNRFSKTQIYLHWITLLFVAITYAAMELRGWFPKGSSTYLLMRETHYNAGIFVWVLMFSRLIIKHRYSDPSIVPPPPAWQMKAASLMHIMLYITFLALPLLGIALMAYSGKSWSFLGFNVSPFVTPNSEIKALIKNIHETWANIGYFLIAAHAGAALFHHYIQKDNTLLRMMPRRK", + "protein_translation_length": 176, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006558" + ], + [ + "gene_synonym", + "ECK1972" + ], + [ + "gene_synonym", + "EcoGene:EG13377" + ], + [ + "gene_synonym", + "GI:90111364" + ], + [ + "gene_synonym", + "GeneID:946489" + ], + [ + "gene_synonym", + "JW1958" + ], + [ + "gene_synonym", + "NP_416484.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76346" + ], + [ + "gene_synonym", + "b1976" + ], + [ + "gene_synonym", + "mtfA" + ], + [ + "gene_synonym", + "yeeI" + ] + ], + "dna_sequence": "ATGATTAAGTGGCCCTGGAAAGTACAAGAATCAGCACATCAAACTGCCCTTCCCTGGCAGGAAGCACTATCGATCCCCCTTTTAACGTGTCTGACGGAACAGGAACAAAGCAAATTAGTCACTCTTGCCGAACGTTTTTTACAGCAAAAGCGGCTTGTTCCTTTACAGGGCTTTGAACTGGATTCATTAAGAAGCTGCCGGATAGCACTTCTATTTTGCCTACCCGTTCTGGAGTTAGGACTGGAATGGCTGGATGGTTTTCATGAAGTCTTAATTTATCCTGCGCCATTTGTGGTCGATGATGAATGGGAAGACGATATCGGTCTGGTGCATAACCAACGTATTGTTCAGTCAGGTCAGAGCTGGCAGCAAGGGCCTATCGTTTTGAACTGGTTGGATATACAAGATTCTTTTGATGCTTCTGGTTTTAACCTGATTATTCATGAAGTCGCTCATAAGCTGGACACCCGTAACGGCGATCGCGCCAGCGGAGTTCCCTTTATTCCGTTGCGTGAGGTTGCTGGCTGGGAACACGATCTTCATGCTGCAATGAACAACATTCAGGAAGAAATCGAATTGGTTGGCGAGAATGCGGCGAGCATTGATGCTTATGCAGCCAGCGATCCTGCTGAATGTTTTGCCGTACTTTCTGAATATTTCTTTAGCGCCCCAGAACTTTTTGCTCCTCGTTTCCCTTCATTGTGGCAACGTTTCTGCCAATTTTATCAACAAGATCCTTTGCAGAGACTGCATCACGCTAATGATACAGACTCGTTTTCGGCGACGAATGTTCATTAA", + "dna_sequence_length": 798, + "functions": [ + "anti-repressor for DgsA(Mlc)" + ], + "id": "CDS_1960", + "location": [ + [ + "NC_000913", + 2043651, + "+", + 798 + ] + ], + "md5": "20f49bce1b9cbcf2d324ebfc75d41dad", + "parent_gene": "", + "protein_md5": "b6424b2fd8a2a7154cf2fe3b6d9e67f5", + "protein_translation": "MIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVTLAERFLQQKRLVPLQGFELDSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGDRASGVPFIPLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSEYFFSAPELFAPRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH", + "protein_translation_length": 265, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006563" + ], + [ + "gene_synonym", + "ECK1974" + ], + [ + "gene_synonym", + "EcoGene:EG13378" + ], + [ + "gene_synonym", + "GI:145698281" + ], + [ + "gene_synonym", + "GeneID:946498" + ], + [ + "gene_synonym", + "JW5833" + ], + [ + "gene_synonym", + "NP_416485.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76347" + ], + [ + "gene_synonym", + "b1978" + ], + [ + "gene_synonym", + "yeeJ" + ] + ], + "dna_sequence": "ATGGCTACGAAGAAGAGAAGTGGAGAAGAAATAAATGACCGACAAATATTATGCGGGATGGGAATTAAACTACGCCGCTTAACTGCGGGTATCTGTCTGATAACTCAACTTGCGTTCCCTATGGCTGCGGCAGCACAAGGTGTGGTAAACGCCGCAACCCAACAACCAGTTCCTGCACAAATTGCCATTGCAAATGCCAATACGGTGCCCTACACCCTTGGAGCGTTGGAATCGGCCCAAAGCGTTGCCGAACGTTTCGGTATTTCGGTGGCTGAGTTACGCAAACTCAACCAGTTTCGTACGTTTGCTCGAGGTTTTGATAATGTCCGCCAGGGTGATGAACTGGATGTCCCGGCACAAGTTAGTGAAAAAAAATTAACCCCGCCGCCGGGTAATAGCAGTGACAACCTCGAGCAACAGATAGCCAGTACTTCACAGCAAATCGGGTCTCTGCTCGCCGAAGATATGAACAGCGAGCAAGCGGCAAATATGGCGCGTGGATGGGCCTCTTCTCAGGCTTCAGGCGCAATGACAGACTGGTTAAGCCGCTTCGGTACCGCAAGAATCACGCTGGGCGTGGATGAAGATTTTAGCCTGAAGAACTCCCAGTTCGATTTTCTCCATCCGTGGTATGAAACGCCTGATAATCTCTTTTTCAGTCAGCATACTCTCCATCGTACTGACGAGCGTACGCAGATTAACAACGGCTTAGGTTGGCGTCATTTCACTCCCACATGGATGTCGGGCATCAACTTCTTTTTCGACCACGATCTTAGCCGTTACCACTCCCGCGCCGGCATTGGCGCGGAGTACTGGCGCGACTATCTAAAATTAAGCAGTAACGGCTATTTGCGACTGACCAACTGGCGCAGCGCACCTGAACTGGACAACGATTATGAAGCACGCCCGGCCAATGGCTGGGATGTACGCGCAGAAAGCTGGCTACCCGCCTGGCCGCACCTTGGCGGTAAACTGGTCTATGAACAGTATTATGGCGATGAAGTGGCCCTGTTCGATAAAGACGATCGGCAAAGTAATCCTCATGCCATAACCGCTGGACTTAACTATACCCCCTTCCCGCTGATGACCTTCAGCGCGGAGCAACGCCAGGGTAAACAGGGCGAAAATGACACCCGTTTTGCCGTCGATTTTACCTGGCAACCTGGCAGCGCAATGCAGAAACAGCTTGACCCGAATGAAGTCGCTGCACGGCGTAGCCTTGCAGGCAGCCGTTATGATCTGGTGGATCGCAACAACAATATCGTTCTGGAATATCGCAAAAAAGAACTGGTTCGCCTGACCCTGACAGACCCCGTGACAGGGAAGTCAGGAGAAGTGAAATCACTGGTTTCGTCGCTACAAACCAAATATGCCCTGAAAGGCTATAACGTCGAAGCCACCGCACTGGAAGCTGCCGGTGGCAAAGTGGTCACAACGGGTAAAGATATTCTGGTTACCCTGCCGGCTTACCGGTTCACCAGTACGCCAGAAACCGATAACACCTGGCCGATTGAAGTCACCGCCGAAGATGTCAAAGGCAATTTGTCGAATCGTGAACAGAGCATGGTGGTCGTTCAGGCACCTACGCTAAGCCAGAAAGATTCCTCGGTATCGTTAAGTACCCAAACATTGAACGCGGATTCCCATTCAACCGCCACACTGACTTTTATTGCGCATGATGCAGCAGGTAATCCTGTTGTCGGGCTGGTGCTCTCGACGCGTCACGAAGGTGTTCAGGACATCACCCTTTCTGACTGGAAAGATAATGGTGACGGAAGCTATACCCAGATCCTGACCACAGGAGCGATGTCTGGCACGCTGACGCTGATGCCACAGCTGAATGGTGTGGATGCGGCTAAAGCCCCCGCCGTGGTGAATATCATTTCTGTTTCGTCATCCCGAACTCACTCGTCAATTAAGATTGATAAGGACCGTTATCTCTCCGGCAATCCTATCGAGGTGACGGTAGAACTGAGAGATGAAAATGACAAACCTGTTAAGGAACAAAAACAGCAACTGAATAACGCAGTCAGCATCGACAACGTGAAACCAGGAGTCACTACAGACTGGAAAGAAACCGCAGATGGCGTCTATAAGGCGACCTATACCGCCTATACCAAAGGCAGTGGACTTACTGCGAAGCTATTAATGCAAAACTGGAATGAAGATTTGCATACCGCTGGATTTATCATCGACGCCAACCCGCAGTCAGCGAAAATTGCGACATTATCTGCCAGCAATAATGGTGTGCTCGCCAATGAGAATGCAGCAAACACCGTCTCGGTCAATGTCGCTGATGAAGGAAGCAACCCAATCAATGATCATACCGTCACGTTTGCGGTATTAAGCGGATCGGCAACTTCCTTCAACAATCAAAACACCGCAAAAACGGATGTTAATGGTCTGGCGACTTTTGATCTGAAAAGTAGTAAGCAGGAAGACAACACGGTTGAAGTCACCCTTGAAAATGGCGTGAAACAAACGTTAATCGTCAGTTTTGTCGGCGACTCGAGTACTGCGCAGGTTGATCTGCAGAAGTCGAAAAATGAAGTGGTTGCTGACGGCAATGACAGCGTCACAATGACCGCGACCGTCCGGGATGCAAAAGGCAACCTGCTCAATGACGTCATGGTCACTTTCAATGTTAATTCAGCAGAGGCGAAACTGAGCCAAACCGAAGTGAATAGCCACGACGGGATCGCCACAGCTACGCTGACCAGTTTGAAAAATGGTGATTATAGGGTTACGGCCTCTGTGAGCTCTGGTTCCCAGGCTAATCAACAGGTGAATTTTATCGGTGATCAAAGTACTGCTGCCCTGACCCTCAGTGTGCCTTCAGGTGATATCACCGTCACCAACACAGCTCCGCAATATATGACTGCAACCTTGCAGGATAAAAATGGCAACCCACTAAAAGATAAAGAAATCACCTTCTCTGTGCCAAACGACGTCGCAAGTAAGTTCTCGATTAGCAACGGAGGAAAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGTTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAATCATCCGGTGGCGGGGATAACGGTAAACTTCACCATGCCACAGGACGTTGCGGCAAACTTTACCCTTGAAAATAACGGTATTGCCATCACTCAGGCCAATGGGGAAGCGCATGTCACGCTGAAAGGTAAAAAAGCGGGCACGCATACGGTTACCGCAACGCTGGGTAATAACAATACCAGTGATTCGCAGCCGGTAACATTTGTGGCGGACAAAGCCTCGGCTCAGGTTGTCCTGCAGATATCAAAAGATGAGATCACAGGTAATGGCGTCGATAGCGCAACGCTAACTGCAACGGTTAAAGATCAGTTCGACAATGAGGTGAATAATCTTCCGGTAACATTCAGCTCAGCCTCTTCAGGACTCACCCTGACCCCGGGAGTAAGTAATACCAACGAGTCTGGCATCGCGCAGGCCACTCTCGCAGGCGTTGCCTTTGGTGAGAAGACGGTTACTGCATCACTGGCTAATAATGGTGCCAGCGACAACAAAACTGTGCATTTTATTGGCGACACAGCGGCGGCAAAAATTATCGAGTTGGCGCCTGTCCCAGACAGCATAATCGCCGGTACCCCGCAGAACAGCTCCGGCAGCGTCATCACCGCCACAGTCGTTGATAATAATGGCTTTCCGGTGAAAGGTGTGACTGTGAACTTCACCAGCAACGCAGCGACAGCCGAAATGACGAACGGCGGTCAAGCCGTGACGAACGAACAGGGTAAGGCTACCGTCACTTATACCAATACCCGCTCCTCGATAGAATCAGGAGCGAGACCGGATACCGTTGAGGCCAGTCTGGAAAATGGTAGCTCCACGCTTAGCACATCAATTAATGTCAACGCTGATGCGTCTACGGCACATCTCACCTTGCTACAGGCACTTTTTGATACAGTCTCCGCAGGCGAGACAACCAGTCTGTATATTGAGGTGAAGGATAATTACGGCAACGGTGTCCCCCAGCAGGAGGTAACCCTCAGCGTTTCACCAAGTGAAGGCGTGACCCCCAGTAATAACGCTATATATACTACCAACCACGACGGCAATTTTTACGCAAGCTTTACCGCTACAAAAGCCGGGGTTTATCAATTGACGGCAACCCTCGAAAATGGCGATTCGATGCAACAAACAGTGACCTATGTGCCGAACGTCGCGAATGCTGAAATCACGCTGGCAGCCTCGAAGGATCCGGTGATTGCCGACAATAACGATCTCACGACACTAACAGCAACAGTCGCTGATACAGAGGGCAATGCGATAGCCAACACTGAGGTAACATTTACTCTGCCGGAAGATGTGAAGGCGAACTTCACGCTGAGCGATGGCGGTAAAGTGATTACTGATGCTGAAGGCAAAGCGAAAGTCACGCTGAAAGGTACAAAAGCAGGCGCTCATACTGTTACAGCATCGATGACTGGCGGTAAGAGTGAGCAGTTGGTGGTGAACTTTATTGCGGATACGCTCACTGCGCAGGTTAATCTTAACGTTACCGAGGACAATTTTATCGCTAATAACGTCGGGATGACCAGGCTGCAGGCAACAGTGACTGATGGAAACGGCAACCCGTTAGCCAATGAGGCGGTGACATTCACGCTACCGGCAGATGTGAGCGCAAGCTTTACTCTCGGACAAGGCGGTTCCGCCATTACTGATATCAACGGCAAGGCTGAAGTTACACTGAGCGGTACAAAATCCGGCACCTACCCCGTGACAGTTAGCGTGAACAATTATGGTGTCAGTGATACGAAACAGGTGACTTTGATTGCCGATGCTGGTACCGCAAAACTAGCCTCCTTAACCTCTGTATACTCATTCGTCGTCAGCACGACCGAGGGCGCAACCATGACGGCAAGCGTCACTGACGCTAACGGCAACCCGGTAGAAGGCATAAAAGTTAATTTCCGCGGAACCTCCGTCACGCTAAGCAGCACCAGCGTTGAAACGGATGATCGGGGTTTCGCTGAAATTCTTGTGACAAGCACCGAGGTCGGACTGAAAACAGTTTCAGCCTCTCTGGCAGATAAACCTACTGAAGTCATCTCGCGATTACTGAATGCCAGTGCAGATGTTAATTCTGCGACGATTACCAGTCTGGAGATACCGGAAGGTCAGGTAATGGTCGCACAAGACGTAGCAGTTAAAGCTCACGTTAACGACCAGTTTGGCAACCCGGTTGCGCATCAACCCGTGACATTCAGTGCAGAGCCATCCTCGCAAATGATCATCAGCCAGAATACGGTCTCTACTAATACGCAGGGTGTAGCCGAGGTCACCATGACGCCCGAAAGAAACGGTTCGTATATGGTGAAAGCATCCCTGCCGAATGGAGCCTCACTTGAGAAACAACTGGAGGCTATTGATGAAAAACTGACACTCACGGCGTCCAGTCCGCTTATCGGTGTCTATGCCCCTACAGGCGCTACTCTGACGGCAACGCTAACCTCTGCAAATGGCACTCCAGTGGAGGGTCAGGTCATCAACTTTAGCGTAACGCCAGAAGGGGCGACGTTAAGTGGCGGAAAAGTGAGAACTAACTCTTCAGGTCAGGCTCCAGTCGTTTTGACCAGCAATAAAGTCGGTACATATACGGTGACTGCATCTTTCCATAACGGCGTAACAATACAGACACAGACAACCGTGAAAGTCACTGGCAACTCAAGCACCGCCCATGTTGCTAGCTTTATCGCTGATCCATCGACTATCGCCGCCACCAACACTGATTTAAGTACCTTAAAGGCAACGGTTGAGGATGGCAGTGGTAACCTGATCGAAGGTCTCACTGTGTACTTCGCCTTAAAAAGCGGCTCTGCCACATTAACGTCATTAACAGCGGTGACCGATCAAAACGGAATCGCGACAACAAGCGTGAAAGGAGCGATGACAGGTAGCGTCACGGTAAGCGCAGTCACGACCGCTGGTGGAATGCAAACAGTAGATATAACGCTGGTGGCTGGCCCGGCAGACACCTCGCAGTCCGTCCTTAAGAGCAATCGGTCATCACTGAAAGGGGACTATACCGATAGTGCTGAATTACGTCTTGTTCTGCACGATATATCAGGCAATCCGATCAAAGTTTCTGAAGGGATGGAATTTGTGCAATCAGGTACTAACGTGCCCTATATAAAAATTAGCGCAATTGATTACAGTCTAAATATCAACGGTGATTACAAAGCCACTGTTACAGGAGGCGGAGAGGGTATCGCAACGCTGATCCCTGTATTGAATGGTGTTCATCAAGCTGGTCTGAGTACCACAATACAATTCACTCGCGCAGAAGACAAAATAATGAGCGGTACAGTATCAGTCAATGGTACTGACCTACCGACAACTACATTCCCTTCGCAGGGGTTCACCGGGGCGTATTATCAGTTGAATAATGACAACTTTGCCCCAGGAAAAACGGCGGCTGATTATGAGTTTTCAAGCTCTGCCTCCTGGGTCGATGTTGATGCTACCGGTAAAGTGACATTTAAAAATGTCGGCAGCAATTCGGAAAGGATTACGGCGACGCCAAAATCAGGAGGCCCTAGCTATGTATACGAAATCCGTGTGAAGAGTTGGTGGGTGAACGCCGGCGAGGCTTTCATGATATACAGCCTTGCTGAAAATTTTTGCAGCAGCAATGGCTACACGCTCCCCAGAGCAAACTATTTAAACCACTGTAGTTCCCGAGGCATCGGGTCACTGTACAGTGAATGGGGAGATATGGGGCATTACACGACTGACGCTGGTTTTCAATCAAATATGTATTGGTCATCTAGTCCCGCAAACTCAAGCGAACAATACGTAGTTTCCCTGGCAACAGGTGATCAAAGCGTATTTGAAAAGCTTGGGTTTGCTTATGCGACATGTTATAAAAACCTGTGA", 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"MATKKRSGEEINDRQILCGMGIKLRRLTAGICLITQLAFPMAAAAQGVVNAATQQPVPAQIAIANANTVPYTLGALESAQSVAERFGISVAELRKLNQFRTFARGFDNVRQGDELDVPAQVSEKKLTPPPGNSSDNLEQQIASTSQQIGSLLAEDMNSEQAANMARGWASSQASGAMTDWLSRFGTARITLGVDEDFSLKNSQFDFLHPWYETPDNLFFSQHTLHRTDERTQINNGLGWRHFTPTWMSGINFFFDHDLSRYHSRAGIGAEYWRDYLKLSSNGYLRLTNWRSAPELDNDYEARPANGWDVRAESWLPAWPHLGGKLVYEQYYGDEVALFDKDDRQSNPHAITAGLNYTPFPLMTFSAEQRQGKQGENDTRFAVDFTWQPGSAMQKQLDPNEVAARRSLAGSRYDLVDRNNNIVLEYRKKELVRLTLTDPVTGKSGEVKSLVSSLQTKYALKGYNVEATALEAAGGKVVTTGKDILVTLPAYRFTSTPETDNTWPIEVTAEDVKGNLSNREQSMVVVQAPTLSQKDSSVSLSTQTLNADSHSTATLTFIAHDAAGNPVVGLVLSTRHEGVQDITLSDWKDNGDGSYTQILTTGAMSGTLTLMPQLNGVDAAKAPAVVNIISVSSSRTHSSIKIDKDRYLSGNPIEVTVELRDENDKPVKEQKQQLNNAVSIDNVKPGVTTDWKETADGVYKATYTAYTKGSGLTAKLLMQNWNEDLHTAGFIIDANPQSAKIATLSASNNGVLANENAANTVSVNVADEGSNPINDHTVTFAVLSGSATSFNNQNTAKTDVNGLATFDLKSSKQEDNTVEVTLENGVKQTLIVSFVGDSSTAQVDLQKSKNEVVADGNDSVTMTATVRDAKGNLLNDVMVTFNVNSAEAKLSQTEVNSHDGIATATLTSLKNGDYRVTASVSSGSQANQQVNFIGDQSTAALTLSVPSGDITVTNTAPQYMTATLQDKNGNPLKDKEITFSVPNDVASKFSISNGGKGMTDSNGVAIASLTGTLAGTHMIMARLANSNVSDAQPMTFVADKDRAVVVLQTSKAEIIGNGVDETTLTATVKDPSNHPVAGITVNFTMPQDVAANFTLENNGIAITQANGEAHVTLKGKKAGTHTVTATLGNNNTSDSQPVTFVADKASAQVVLQISKDEITGNGVDSATLTATVKDQFDNEVNNLPVTFSSASSGLTLTPGVSNTNESGIAQATLAGVAFGEKTVTASLANNGASDNKTVHFIGDTAAAKIIELAPVPDSIIAGTPQNSSGSVITATVVDNNGFPVKGVTVNFTSNAATAEMTNGGQAVTNEQGKATVTYTNTRSSIESGARPDTVEASLENGSSTLSTSINVNADASTAHLTLLQALFDTVSAGETTSLYIEVKDNYGNGVPQQEVTLSVSPSEGVTPSNNAIYTTNHDGNFYASFTATKAGVYQLTATLENGDSMQQTVTYVPNVANAEITLAASKDPVIADNNDLTTLTATVADTEGNAIANTEVTFTLPEDVKANFTLSDGGKVITDAEGKAKVTLKGTKAGAHTVTASMTGGKSEQLVVNFIADTLTAQVNLNVTEDNFIANNVGMTRLQATVTDGNGNPLANEAVTFTLPADVSASFTLGQGGSAITDINGKAEVTLSGTKSGTYPVTVSVNNYGVSDTKQVTLIADAGTAKLASLTSVYSFVVSTTEGATMTASVTDANGNPVEGIKVNFRGTSVTLSSTSVETDDRGFAEILVTSTEVGLKTVSASLADKPTEVISRLLNASADVNSATITSLEIPEGQVMVAQDVAVKAHVNDQFGNPVAHQPVTFSAEPSSQMIISQNTVSTNTQGVAEVTMTPERNGSYMVKASLPNGASLEKQLEAIDEKLTLTASSPLIGVYAPTGATLTATLTSANGTPVEGQVINFSVTPEGATLSGGKVRTNSSGQAPVVLTSNKVGTYTVTASFHNGVTIQTQTTVKVTGNSSTAHVASFIADPSTIAATNTDLSTLKATVEDGSGNLIEGLTVYFALKSGSATLTSLTAVTDQNGIATTSVKGAMTGSVTVSAVTTAGGMQTVDITLVAGPADTSQSVLKSNRSSLKGDYTDSAELRLVLHDISGNPIKVSEGMEFVQSGTNVPYIKISAIDYSLNINGDYKATVTGGGEGIATLIPVLNGVHQAGLSTTIQFTRAEDKIMSGTVSVNGTDLPTTTFPSQGFTGAYYQLNNDNFAPGKTAADYEFSSSASWVDVDATGKVTFKNVGSNSERITATPKSGGPSYVYEIRVKSWWVNAGEAFMIYSLAENFCSSNGYTLPRANYLNHCSSRGIGSLYSEWGDMGHYTTDAGFQSNMYWSSSPANSSEQYVVSLATGDQSVFEKLGFAYATCYKNL", + "protein_translation_length": 2358, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006565" + ], + [ + "gene_synonym", + "ASAP:ABE-0006568" + ], + [ + "gene_synonym", + "ASAP:ABE-0285098" + ], + [ + "gene_synonym", + "ECK1975" + ], + [ + "gene_synonym", + "EcoGene:EG13380" + ], + [ + "gene_synonym", + "GeneID:2847764" + ], + [ + "gene_synonym", + "JW1961" + ], + [ + "gene_synonym", + "JW5325" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76349" + ], + [ + "gene_synonym", + "b4497" + ], + [ + "gene_synonym", + "yeeK" + ], + [ + "gene_synonym", + "yeeL" + ] + ], + "dna_sequence": "ATGTTTTTAGCATCATTGTTGAGACGTATTGCATTTAGTTACTACGATTATAAAGCTTATAATTTCAATATTGAAAAAACAGACTTTGTTGTCATCCATATTCCCGATCAGATTGGCGATGCTATGGCCATCTTTCCTGTTATTCGGGCGCTTGAATTGCATAAAATTAAGCATCTTTTAATTGTAACGTCGACAATTAATTTAGAAGTCTTTAATGCGCTTAAACTTGAACAGACTAAATTAACATTAGTCACAATGACTATGCAGGATCACGCAACATTAAAAGAAATAAAAGATTTAGCAAAGAACATAACACAGCAATACGGTACGCCGGATCTTTGCATTGAGGGGATGCGTAAAAAGAACCTGAAAACGATGTTATTTATCAGTCAGTTGAAAGCAAAAACGAATTTTCAGGTTGTTGGTATAACCATGAATTGCTTCTCCCCTTTGTGCAAGAACGCGTCCAGTATGGATCAGAAACTCCGGGCTCCCGTACCTATGACATGGGCATTTATGATGCGTGAGGCGGGTTTTCCAGCAGTCAGGCCAATATATGAATTGCCACTAAGTGAGGATGTACTCGATGAGGTGCGCGAGGAAATGCGATCGTTAGGATCTTACATTGCGTTCAATTTAGAAGGTAGCTCGCAGGAACGTACATTTTCATTATCGATTGCAGAAAATCTAATAGCAAAAATTTAAAGTGAAACAGATATACCAATAGTGATCGTTCATGGACCCAAAGGTGAAGATAAAGCCAGGGCATTAGTGGATTGTTATAATAATGTCTACCGTTTATCCTTACCACCCTCGATTAAACGTTCAGCAGCAATCATAAAAGATGCTTATATCGCAATAACTCCTGACACCTCAATATTACATATGGCAAGTGCCTATAATACCCCTGTTGTTGCAATTTATGCTGATTACAAAACGCGATGGCCCGCAATGGCCGATGTCTCGGAGTCAGTCGTCGTTGGGCAAAAAATTGACAATATAAGTCTGGATGAATTCGCAAAGGCATTAAAAAGTGTTTTGGCGAGAATATGA", + "dna_sequence_length": 1053, + "id": "CDS_1962", + "location": [ + [ + "NC_000913", + 2053328, + "-", + 1053 + ] + ], + "md5": "b3ec2a7c08ccaa5ea01b2b8277a4e05b", + "parent_gene": "", + "protein_md5": "84b51356060b14938d3c6f976e1fdb75", + "protein_translation": "MFLASLLRRIAFSYYDYKAYNFNIEKTDFVVIHIPDQIGDAMAIFPVIRALELHKIKHLLIVTSTINLEVFNALKLEQTKLTLVTMTMQDHATLKEIKDLAKNITQQYGTPDLCIEGMRKKNLKTMLFISQLKAKTNFQVVGITMNCFSPLCKNASSMDQKLRAPVPMTWAFMMREAGFPAVRPIYELPLSEDVLDEVREEMRSLGSYIAFNLEGSSQERTFSLSIAENLIAKI", + "protein_translation_length": 234, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006572" + ], + [ + "gene_synonym", + "ECK1976" + ], + [ + "gene_synonym", + "EcoGene:EG20205" + ], + [ + "gene_synonym", + "GI:16129925" + ], + [ + "gene_synonym", + "GeneID:946495" + ], + [ + "gene_synonym", + "JW1962" + ], + [ + "gene_synonym", + "NP_416488.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76350" + ], + [ + "gene_synonym", + "b1981" + ], + [ + "gene_synonym", + "shiA" + ], + [ + "gene_synonym", + "yeeM" + ] + ], + "dna_sequence": "ATGGACTCCACGCTCATCTCCACTCGTCCCGATGAAGGGACGCTTTCGTTAAGTCGCGCCCGACGAGCTGCGTTAGGCAGCTTCGCTGGTGCCGTCGTCGACTGGTATGATTTTTTACTCTATGGCATCACCGCCGCACTGGTGTTTAATCGCGAGTTTTTCCCGCAAGTAAGCCCGGCGATGGGAACGCTCGCCGCATTTGCTACCTTTGGCGTCGGATTTCTTTTCCGTCCGCTCGGCGGTGTCATTTTCGGTCACTTTGGCGACCGACTGGGACGTAAGCGCATGTTAATGCTGACCGTCTGGATGATGGGCATCGCGACAGCCTTGATTGGTATTCTTCCTTCATTCTCGACCATTGGGTGGTGGGCACCTATTTTGCTGGTGACACTGCGTGCCATTCAGGGATTTGCAGTCGGCGGCGAATGGGGAGGCGCGGCGTTGCTTTCCGTTGAAAGTGCACCGAAAAATAAAAAAGCCTTTTACAGTAGCGGTGTACAAGTTGGCTACGGTGTAGGTTTACTGCTTTCAACCGGACTGGTTTCATTGATCAGTATGATGACGACTGACGAACAGTTTTTAAGCTGGGGCTGGCGCATTCCTTTCCTGTTTAGCATCGTACTGGTACTGGGAGCATTGTGGGTGCGCAATGGCATGGAGGAGTCCGCGGAATTTGAACAACAGCAACATTATCAAGCTGCCGCGAAAAAACGCATCCCGGTTATCGAAGCGCTGTTACGACATCCCGGTGCTTTCCTGAAGATTATTGCGCTACGACTGTGCGAATTGCTGACGATGTACATCGTTACTGCCTTTGCACTTAATTATTCAACCCAGAATATGGGGCTACCGCGCGAACTTTTCCTTAATATTGGTTTGCTGGTAGGTGGATTAAGCTGCCTGACAATTCCCTGTTTTGCCTGGCTTGCCGATCGTTTTGGTCGCCGTAGGGTTTATATCACAGGTACGTTAATCGGAACGTTGAGCGCATTTCCTTTCTTTATGGCGCTTGAAGCACAATCTATTTTCTGGATAGTTTTCTTCTCCATAATGCTGGCAAACATTGCGCATGACATGGTGGTGTGTGTGCAACAACCGATGTTTACCGAAATGTTTGGTGCCAGTTATCGCTATAGTGGCGCTGGAGTCGGTTATCAGGTTGCCAGTGTGGTTGGCGGTGGATTTACACCTTTTATTGCCGCTGCACTCATCACTTACTTTGCCGGGAACTGGCATAGCGTCGCCATTTATTTGCTGGCTGGATGCCTGATTTCCGCAATGACCGCTTTGTTGATGAAAGACAGTCAACGCGCTTGA", 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"GI:16129926" + ], + [ + "gene_synonym", + "GeneID:946508" + ], + [ + "gene_synonym", + "JW1963" + ], + [ + "gene_synonym", + "NP_416489.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE12" + ], + [ + "gene_synonym", + "amn" + ], + [ + "gene_synonym", + "b1982" + ] + ], + "dna_sequence": "ATGAATAATAAGGGCTCCGGTCTGACCCCAGCTCAGGCACTGGATAAACTCGACGCGCTGTATGAGCAATCTGTAGTCGCATTACGCAACGCCATTGGCAACTATATTACAAGTGGCGAATTACCTGATGAAAACGCCCGCAAACAAGGTCTTTTTGTCTATCCATCACTGACCGTAACCTGGGACGGTAGCACAACCAATCCCCCCAAAACGCGCGCATTTGGTCGCTTTACCCACGCAGGCAGCTACACCACCACGATTACTCGCCCTACTCTCTTTCGTTCGTATCTTAATGAACAACTTACGTTGCTGTATCAGGATTATGGTGCGCATATCTCAGTGCAACCCTCGCAGCATGAAATCCCTTATCCTTATGTCATCGATGGCTCTGAATTGACACTTGATCGCTCAATGAGCGCTGGGTTAACTCGCTACTTCCCGACAACAGAACTGGCGCAAATTGGCGATGAAACTGCAGACGGCATTTATCATCCAACTGAATTCTCCCCGCTATCGCATTTTGATGCGCGCCGCGTCGATTTTTCCCTCGCACGGTTGCGCCATTATACCGGTACGCCAGTTGAACATTTTCAGCCGTTCGTCTTGTTTACCAACTACACACGTTATGTGGATGAATTCGTTCGTTGGGGATGCAGCCAGATCCTCGATCCTGATAGTCCCTACATTGCCCTTTCTTGTGCTGGCGGGAACTGGATCACCGCCGAAACCGAAGCGCCAGAAGAAGCCATTTCCGACCTTGCATGGAAAAAACATCAGATGCCAGCATGGCATTTAATTACCGCCGATGGTCAGGGTATTACTCTGGTGAATATTGGCGTGGGACCGTCAAATGCTAAAACCATCTGCGATCATCTGGCAGTGCTACGCCCGGATGTCTGGTTGATGATTGGTCACTGTGGCGGATTACGTGAAAGTCAGGCCATTGGCGATTATGTACTTGCACACGCTTATTTACGCGATGACCACGTTCTTGATGCGGTTCTGCCGCCCGATATTCCTATTCCGAGCATTGCTGAAGTGCAACGTGCGCTTTATGACGCCACCAAGCTGGTGAGCGGCAGGCCCGGTGAGGAAGTCAAACAGCGGCTACGTACTGGTACTGTGGTAACCACAGATGACAGGAACTGGGAATTACGTTACTCAGCTTCTGCACTTCGTTTTAACTTAAGCCGGGCCGTAGCAATTGATATGGAAAGTGCAACCATTGCCGCGCAAGGATATCGTTTCCGCGTGCCATACGGGACACTACTGTGTGTTTCAGATAAACCGTTGCATGGCGAGATTAAACTTCCCGGCCAGGCTAACCGTTTTTATGAAGGCGCTATTTCCGAACATCTGCAAATTGGCATTCGGGCGATCGATTTGCTGCGCGCAGAAGGCGACCGACTGCATTCGCGTAAATTACGAACCTTTAATGAGCCGCCGTTCCGATAA", 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"91f3bc2cc5f1320647f1e1fb1479af44", + "protein_translation": "MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELNTSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSNVNRTIANVRTIFNKKGGNIGAAGSVSYMFDNTGVIVFKGTDPDHIFEILLEAEVDVRDVTEEEGNIVIYTEPTDLHKGIAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKVYHNVANL", + "protein_translation_length": 238, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006586" + ], + [ + "gene_synonym", + "ECK1980" + ], + [ + "gene_synonym", + "EcoGene:EG13383" + ], + [ + "gene_synonym", + "GI:226524727" + ], + [ + "gene_synonym", + "GeneID:946506" + ], + [ + "gene_synonym", + "JW1965" + ], + [ + "gene_synonym", + "NP_416491.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76352" + ], + [ + "gene_synonym", + "b1985" + ], + [ + "gene_synonym", + "yeeO" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG14264" + ], + [ + "gene_synonym", + "GI:16129929" + ], + [ + "gene_synonym", + "GeneID:946502" + ], + [ + "gene_synonym", + "JW1966" + ], + [ + "gene_synonym", + "NP_416492.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47083" + ], + [ + "gene_synonym", + "b1987" + ], + [ + "gene_synonym", + "cbl" + ] + ], + "dna_sequence": 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"gene_synonym", + "UniProtKB/Swiss-Prot:Q47005" + ], + [ + "gene_synonym", + "b1988" + ], + [ + "gene_synonym", + "nac" + ] + ], + "dna_sequence": 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regulon transcriptional regulator", + "autorepressor" + ], + "id": "CDS_1968", + "location": [ + [ + "NC_000913", + 2061933, + "-", + 918 + ] + ], + "md5": "c830730a0ecb945edbb2a1166a9a7b5a", + "parent_gene": "", + "protein_md5": "42afa4a741ddc33f47f045646e6cbbb2", + "protein_translation": "MNFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGELNQQLLIRTKRGVTPTDAGKILYTHARAILRQCEQAQLAVHNVGQALSGQVSIGFAPGTAASSITMPLLQAVRAEFPEIVIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQALLKEDLFLVGTQDCPGQSVDVNAIAQMNLFLPSDYSAIRLRVDEAFSLRRLTAKVIGEIESIATLTAAIASGMGVAVLPESAARSLCGAVNGWMSRITTPSMSLSLSLNLPARANLSPQAQAVKELLMSVISSPVMEKRQWQLVS", + "protein_translation_length": 305, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006607" + ], + [ + "gene_synonym", + "ECK1985" + ], + [ + "gene_synonym", + "EcoGene:EG12682" + ], + [ + "gene_synonym", + "GI:16129931" + ], + [ + "gene_synonym", + "GeneID:945273" + ], + [ + "gene_synonym", + "JW1968" + ], + [ + "gene_synonym", + "NP_416494.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39176" + ], + [ + "gene_synonym", + "b1990" + ], + [ + "gene_synonym", + "erfK" + ], + [ + "gene_synonym", + "ldtA" + ], + [ + "gene_synonym", + "srfK" + ], + [ + "gene_synonym", + "yeeG" + ], + [ + "gene_synonym", + "yzzT" + ] + ], + "dna_sequence": 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"L,D-transpeptidase linking Lpp to murein" + ], + "id": "CDS_1969", + "location": [ + [ + "NC_000913", + 2063323, + "-", + 933 + ] + ], + "md5": "e4332eda8ff8419705dd7cdfa0dbdcb4", + "parent_gene": "", + "protein_md5": "58dfc7bde3dbaccd9264edaa9f55b6d0", + "protein_translation": "MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPDTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006611" + ], + [ + "gene_synonym", + "ECK1986" + ], + [ + "gene_synonym", + "EcoGene:EG12151" + ], + [ + "gene_synonym", + "GI:16129932" + ], + [ + "gene_synonym", + "GeneID:946517" + ], + [ + "gene_synonym", + "JW1969" + ], + [ + "gene_synonym", + "NP_416495.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36562" + ], + [ + "gene_synonym", + "b1991" + ], + [ + "gene_synonym", + "cobT" + ] + ], + "dna_sequence": 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"MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDKTLESGKVTFFSRTKQRLWTKGETSGNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTSSCFGDTAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALAATVHDRFELTNEASDLMYHLLVLLQDQGLDLTTVIENLRKRHQ", + "protein_translation_length": 203, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006731" + ], + [ + "gene_synonym", + "ECK2022" + ], + [ + "gene_synonym", + "EcoGene:EG13406" + ], + [ + "gene_synonym", + "GI:90111375" + ], + [ + "gene_synonym", + "GeneID:946553" + ], + [ + "gene_synonym", + "JW5836" + ], + [ + "gene_synonym", + "NP_416531.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76372" + ], + [ + "gene_synonym", + "b2027" + ], + [ + "gene_synonym", + "cld" + ], + [ + "gene_synonym", + "rol" + ], + [ + "gene_synonym", + "wzz" + ], + [ + "gene_synonym", + "wzzB" + ] + ], + "dna_sequence": 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"212492841f5916a32340269f841e509e", + "parent_gene": "", + "protein_md5": "c2d703039bd79e4fea7248224016e5dc", + "protein_translation": "MVYIIIVSHGHEDYIKKLLENLNADDEHYKIIVRDNKDSLLLKQICQHYAGLDYISGGVYGFGHNNNIAVAYVKEKYRPADDDYILFLNPDIIMKHDDLLTYIKYVESKRYAFSTLCLFRDEAKSLHDYSVRKFPVLSDFIVSFMLGINKTKIPKESIYSDTVVDWCAGSFMLVRFSDFVRVNGFDQGYFMYCEDIDLCLRLSLAGVRLHYVPAFHAIHYAHHDNRSFFSKAFRWHLKSTFRYLARKRILSNRNFDRISSVFHP", + "protein_translation_length": 264, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006742" + ], + [ + "gene_synonym", + "ECK0261" + ], + [ + "gene_synonym", + "EcoGene:EG40008" + ], + [ + "gene_synonym", + "GI:16129971" + ], + [ + "gene_synonym", + "GeneID:946577" + ], + [ + "gene_synonym", + "NP_416535.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CE54" + ], + [ + "gene_synonym", + "b2030" + ], + [ + "gene_synonym", + "insH1" + ] + ], + "dna_sequence": 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+ ], + [ + "gene_synonym", + "JW2018" + ], + [ + "gene_synonym", + "NP_416537.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37750" + ], + [ + "gene_synonym", + "b2033" + ], + [ + "gene_synonym", + "wbbJ" + ], + [ + "gene_synonym", + "yefH" + ] + ], + "dna_sequence": "ATGATCTTAAAACTCGCTAAACGATATGGTCTCTGTGGTTTTATTCGGCTTGTTAGAGATGTCTTATTGACTCGTGTATTTTACCGGAACTGTAGAATTATTCGATTTCCCTGCTATATTCGCAATGATGGTAGCATTAATTTTGGTGAAAATTTCACAAGTGGAGTCGGTCTCAGGCTGGATGCATTTGGACGTGGCGTGATTTTTTTTTCCGATAATGTGCAAGTTAACGACTATGTTCATATCGCCTCAATTGAGAGCGTTACGATAGGTCGGGATACGCTTATTGCAAGTAAAGTATTTATTACCGATCATAATCACGGTTCCTTTAAGCACTCTGATCCAATGAGTTCGCCAAATATACCTCCAGACATGCGCACGTTGGAATCTTCAGCTGTTGTAATTGGCCAGAGGGTTTGGTTGGGTGAGAATGTGACGGTTTTGCCTGGAACAATTATTGGTAATGGAGTCGTAGTCGGCGCCAATTCTGTTGTTAGAGGTTCTATTCCCGAAAATACTGTCATTGCGGGAGTACCAGCAAAAATCATAAAGAAATACAATCATGAGACCAAATTATGGGAAAAAGCATAG", + "dna_sequence_length": 591, + "functions": [ + "putative lipopolysaccharide biosynthesis O-acetyl transferase" + ], + "id": "CDS_2018", + "location": [ + [ + "NC_000913", + 2105084, + "-", + 591 + ] + ], + "md5": "5036b511c98127ddb9deb69576a6faa4", + "parent_gene": "", + "protein_md5": "a3cf80b1a96f40737bdf834c2afbe003", + "protein_translation": "MILKLAKRYGLCGFIRLVRDVLLTRVFYRNCRIIRFPCYIRNDGSINFGENFTSGVGLRLDAFGRGVIFFSDNVQVNDYVHIASIESVTIGRDTLIASKVFITDHNHGSFKHSDPMSSPNIPPDMRTLESSAVVIGQRVWLGENVTVLPGTIIGNGVVVGANSVVRGSIPENTVIAGVPAKIIKKYNHETKLWEKA", + "protein_translation_length": 196, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006751" + ], + [ + "gene_synonym", + "ECK2028" + ], + [ + "gene_synonym", + "EcoGene:EG11983" + ], + [ + "gene_synonym", + "GI:16129974" + ], + [ + "gene_synonym", + "GeneID:947041" + ], + [ + "gene_synonym", + "JW2019" + ], + [ + "gene_synonym", + "NP_416538.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37749" + ], + [ + "gene_synonym", + "b2034" + ], + [ + "gene_synonym", + "wbbI" + ], + [ + "gene_synonym", + "yefG" + ] + ], + "dna_sequence": 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"dna_sequence_length": 993, + "functions": [ + "d-Galf:alpha-d-Glc beta-1,6-galactofuranosyltransferase" + ], + "id": "CDS_2019", + "location": [ + [ + "NC_000913", + 2106057, + "-", + 993 + ] + ], + "md5": "b9eb0e063a896d6c7066778c0a373c3b", + "parent_gene": "", + "protein_md5": "a7856af340583419477f2ba362e07f5d", + "protein_translation": "MYFLNDLNFSRRDAGFKARKDALDIASDYENISVVNIPLWGGVVQRIISSVKLSTFLCGLENKDVLIFNFPMAKPFWHILSFFHRLLKFRIVPLIHDIDELRGGGGSDSVRLATCDMVISHNPQMTKYLSKYMSQDKIKDIKIFDYLVSSDVEHRDVTDKQRGVIYAGNLSRHKCSFIYTEGCDFTLFGVNYENKDNPKYLGSFDAQSPEKINLPGMQFGLIWDGDSVETCSGAFGDYLKFNNPHKTSLYLSMELPVFIWDKAALADFIVDNRIGYAVGSIKEMQEIVDSMTIETYKQISENTKIISQKIRTGSYFRDVLEEVIDDLKTR", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006753" + ], + [ + "gene_synonym", + "ECK2029" + ], + [ + "gene_synonym", + "EcoGene:EG11982" + ], + [ + "gene_synonym", + "GI:16129975" + ], + [ + "gene_synonym", + "GeneID:945179" + ], + [ + "gene_synonym", + "JW2020" + ], + [ + "gene_synonym", + "NP_416539.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37748" + ], + [ + "gene_synonym", + "b2035" + ], + [ + "gene_synonym", + "rfc" + ], + [ + "gene_synonym", + "wbbH" + ], + [ + "gene_synonym", + "yefF" + ] + ], + "dna_sequence": "ATGATCTATCTTGTAATTAGTGTCTTTCTCATTACAGCATTTATCTGTTTATATCTTAAGAAGGATATATTTTATCCAGCCGTATGCGTTAATATCATCTTCGCACTGGTCTTATTGGGATATGAAATAACGTCAGATATATATGCTTTTCAGTTAAATGACGCTACGTTGATTTTTCTACTTTGCAATGTTTTGACATTTACCCTGTCATGTTTATTGACGGAAAGTGTATTAGATCTAAATATCAGAAAAGTCAATAATGCTATTTATAGCATACCATCGAAGAAAGTGCATAATGTAGGCTTGTTAGTTATTTCTTTTTCGATGATATATATATGCATGAGGTTAAGTAACTACCAGTTCGGGACTAGCTTACTTAGCTATATGAATTTGATAAGAGATGCTGATGTTGAAGACACATCAAGAAATTTCTCAGCATACATGCAGCCAATCATTCTAACTACTTTTGCTTTATTTATTTGGTCTAAAAAATTTACTAATACAAAGGTAAGTAAAACATTTACTTTACTTGTTTTTATTGTATTCATCTTTGCAATTATACTGAATACTGGTAAGCAAATTGTCTTTATGGTTATCATCTCTTATGCATTCATCGTAGGTGTTAATAGAGTAAAACATTATGTTTATCTTATTACAGCTGTAGGTGTTCTATTCTCCTTGTATATGCTCTTTTTACGTGGACTGCCTGGGGGGATGGCATATTATCTATCCATGTATTTGGTCAGCCCTATAATCGCGTTTCAGGAGTTTTATTTTCAGCAAGTATCTAACTCTGCCAGTTCTCATGTCTTTTGGTTTTTTGAAAGGCTGATGGGGCTATTAACAGGTGGAGTCTCTATGTCGTTGCATAAAGAATTTGTGTGGGTGGGTTTGCCAACAAATGTTTATACTGCTTTTTCGGATTATGTTTATATTTCCGCGGAGCTAAGCTATTTGATGATGGTTATTCATGGCTGTATTTCAGGTGTTTTATGGAGATTGTCTCGAAATTACATATCTGTGAAAATATTTTATTCATATTTTATTTATACCTTTTCTTTCATTTTTTATCATGAAAGCTTCATGACTAATATTAGCAGTTGGATACAAATAACTCTTTGTATCATAGTATTCTCTCAATTTCTTAAGGCCCAGAAAATAAAGTGA", 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"dTDP-4-deoxyrhamnose-3,5-epimerase" + ], + "id": "CDS_2023", + "location": [ + [ + "NC_000913", + 2110138, + "-", + 558 + ] + ], + "md5": "5c6f5c1b1745c578189a173a3b07c4e2", + "parent_gene": "", + "protein_md5": "9bf85933bdf484f6262ba039af857a65", + "protein_translation": "MNVIRTEIEDVLILEPRVFGDDRGFFYESFNQSAFEHILGYPVSFVQDNHSRSSKNVLRGLHFQRGEYAQDKLVRCTHGAVFDVAVDIRPNSVSFGKWVGVLLSADNKQQLWIPKGFAHGFLVLSDIAEFQYKTTNYYHPESDCGICWNDERIAIDWPQTSGLILSPKDERLFTLDELIRLKLIA", + "protein_translation_length": 185, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006762" + ], + [ + "gene_synonym", + "ECK2033" + ], + [ + "gene_synonym", + "EcoGene:EG11978" + ], + [ + "gene_synonym", + "GI:16129979" + ], + [ + "gene_synonym", + "GeneID:945154" + ], + [ + "gene_synonym", + "JW2024" + ], + [ + "gene_synonym", + "NP_416543.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37744" + ], + [ + "gene_synonym", + "b2039" + ], + [ + "gene_synonym", + "rfbA" + ], + [ + "gene_synonym", + 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"UniProtKB/Swiss-Prot:P37759" + ], + [ + "gene_synonym", + "b2041" + ], + [ + "gene_synonym", + "rfbB" + ], + [ + "gene_synonym", + "rmlB" + ], + [ + "gene_synonym", + "som" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:946569" + ], + [ + "gene_synonym", + "JW2030" + ], + [ + "gene_synonym", + "NP_416549.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71242" + ], + [ + "gene_synonym", + "b2045" + ], + [ + "gene_synonym", + "wcaK" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG13575" + ], + [ + "gene_synonym", + "GI:16129987" + ], + [ + "gene_synonym", + "GeneID:946583" + ], + [ + "gene_synonym", + "JW2032" + ], + [ + "gene_synonym", + "NP_416551.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P71241" + ], + [ + "gene_synonym", + "b2047" + ], + [ + "gene_synonym", + "wcaJ" + ] + ], + "dna_sequence": 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"NC_000913", + 2126222, + "-", + 480 + ] + ], + "md5": "be22757a484008d682eb8f4e8bebdd1f", + "parent_gene": "", + "protein_md5": "a2903ac131f1fb9678d1e7d074054bc8", + "protein_translation": "MFLRQEDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLASDNVHANSRAYFLAEKRTGVPGL", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0006801" + ], + [ + "gene_synonym", + "ECK2046" + ], + [ + "gene_synonym", + "EcoGene:EG11788" + ], + [ + "gene_synonym", + "GI:16129992" + ], + [ + "gene_synonym", + "GeneID:946563" + ], + [ + "gene_synonym", + "JW2037" + ], + [ + "gene_synonym", + "NP_416556.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32055" + ], + [ + "gene_synonym", + "b2052" + ], + [ + "gene_synonym", + "fcl" + ], + [ + "gene_synonym", + "wcaG" + ], + [ + "gene_synonym", + "yefB" + ] + ], + "dna_sequence": 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"MSKQSQHVLIALPHPLLHLVSLGLVSFIFTLFSLELSQFGTQLAPLWFPTSIMMVAFYRHAGRMWPGIALSCSLGNIAASILLFSTSSLNMTWTTINIVEAVVGAVLLRKLLPWYNPLQNLADWLRLALGSAIVPPLLGGVLVVLLTPGDDPLRAFLIWVLSESIGALALVPLGLLFKPHYLLRHRNPRLLFESLLTLAITLTLSWLSMLYLPWPFTFIIVLLMWSAVRLPRMEAFLIFLTTVMMVSLMMAADPSLLATPRTYLMSHMPWLPFLLILLPANIMTMVMYAFRAERKHISESETHFRNAMEYSAIGMALVGTEGQWLQTNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLISGEINTYSMEKRYYNRNGDVVWALLAVSLVRHTDGTPLYFIAQIEDINELKRTEQVNQQLMERITLANEAGGIGIWEWELKPNIFSWDKRMFELYEIPPHIKPNWQVWYECVLPEDRQHAEKVIRDSLQSRSPFKLEFRITVKDGIRHIRALANRVLNKEGEVERLLGINMDMTEVKQLNEALFQEKERLHITLDSIGEAVVCIDMAMKITFMNPVAEKMSGWTQEEALGVPLLTVLHITFGDNGPLMENIYSADTSRSAIEQDVVLHCRSGGSYDVHYSITPLSTLDGSNIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLRILLQTVNSTHQRHALVFIDLDRFKAVNDSAGHAAGDALLRELASLMLSMLRSSDVLARLGGDEFGLLLPDCNVESARFIATRIISAVNDYHFIWEGRVHRVGASAGITLIDDNNHQAAEVMSQADIACYASKNGGRGRVTVYEPQQAAAHSERAAMSLDEQWRMIKENQLMMLAHGVASPRIPEARNLWLISLKLWSCEGEIIDEQTFRRSFSDPALSHALDRRVFHEFFQQAAKAVASKGISISLPLSVAGLSSATLVNDLLEQLENSPLPPRLLHLIIPAEAILDHAESVQKLRLAGCRIVLSQVGRDLQIFNSLKANMADYLLLDGELCANVQGNLMDEMLITIIQGHAQRLGMKTIAGPVVLPLVMDTLSGIGVDLIYGEVIADAQPLDLLVNSSYFAIN", 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"gene_synonym", + "GI:16130010" + ], + [ + "gene_synonym", + "GeneID:947159" + ], + [ + "gene_synonym", + "JW2055" + ], + [ + "gene_synonym", + "NP_416574.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76393" + ], + [ + "gene_synonym", + "b2070" + ], + [ + "gene_synonym", + "yegI" + ] + ], + "dna_sequence": "ATGAAAACAAATATAAAAGTATTTACATCGACAGGTGAATTGACCACTCTTGGCCGTGAACTGGGCAAAGGTGGTGAAGGCGCGGTTTATGATATCGAGGAGTTTGTCGATAGCGTCGCCAAGATTTATCACACGCCGCCACCCGCCTTAAAACAGGACAAACTTGCCTTTATGGCTGCGACAGCTGACGCGCAGTTGTTGAATTATGTCGCCTGGCCGCAGGCAACGCTTCACGGTGGACGAGGCGGAAAAGTTATCGGTTTTATGATGCCAAAAGTTTCTGGTAAAGAACCGATTCATATGATCTATAGCCCGGCACATCGTCGCCAGAGTTACCCTCATTGTGCGTGGGATTTTCTACTCTATGTTGCGCGCAATATTGCTTCATCTTTTGCTACGGTTCACGAGCACGGGCACGTCGTGGGTGACGTAAACCAGAACAGTTTTATGGTAGGTCGCGACAGCAAAGTGGTACTGATTGATAGCGACTCCTTTCAAATTAACGCCAATGGCACACTGCATTTATGCGAAGTCGGCGTGTCGCATTTTACGCCGCCAGAGCTACAAACCTTGCCATCATTTGTCGGTTTTGAACGCACAGAAAATCACGATAATTTTGGCCTTGCGTTGCTAATTTTTCACGTCTTGTTTGGTGGGCGGCATCCTTATTCTGGTGTGCCGCTTATCTCTGATGCGGGTAATGCGCTGGAGACGGATATTACCCATTTCCGTTATGCCTACGCGTCAGATAATCAGCGACGTGGTTTAAAACCGCCGCCACGATCTATTCCGCTATCGATGTTACCGAGTGATGTTGAAGCCATGTTTCAGCAGGCATTCACGGAAAGTGGCGTGGCAACCGGGCGTCCGACGGCTAAAGCGTGGGTAGCGGCACTGGACTCTCTACGCCAACAGTTAAAGAAATGTATCGTTTCAGCAATGCATGTTTACCCCGCTCATTTGACTGACTGCCCGTGGTGTGCGCTGGATAATCAAGGTGTTATCTATTTTATTGATCTCGGCGAAGAGGTCATTACCACCGGCGGGAATTTTGTGCTGGCGAAAGTCTGGGCGATGGTGATGGCGTCAGTAGCACCGCCAGCATTGCAACTGCCATTACCCGATCATTTCCAACCGACTGGCAGGCCGCTTCCTTTAGGCCTGTTACGGCGCGAATACATCATTCTGCTTGAGATCGCACTGTCAGCATTATCGCTGCTGCTTTGCGGCCTTCAGGCAGAACCGCGTTATATTATTTTGGTTCCTGTGCTGGCGGCTATCTGGATTATTGGCAGTCTGACAAGCAAAGCGTACAAAGCAGAAGTTCAGCAACGCCGTGAGGCATTTAATCGTGCGAAAATGGACTATGACCATTTAGTCCGCCAGATCCAGCAGGTAGGCGGCCTGGAAGGTTTTATCGCCAAACGGACGATGCTCGAAAAAATGAAGGACGAAATTCTCGGGTTACCGGAAGAAGAGAAACGCGCTCTGGCAGCACTTCATGACACTGCAAGGGAACGGCAGAAGCAGAAGTTTCTGGAGGGATTTTTTATTGATGTTGCCTCTATTCCCGGCGTTGGCCCTGCGCGTAAAGCGGCGTTACGGTCTTTTGGTATTGAAACAGCCGCAGATGTTACCCGTCGTGGCGTTAAGCAAGTGAAAGGGTTTGGCGACCATCTGACCCAGGCGGTTATCGACTGGAAAGCGAGCTGTGAACGCCGTTTTGTGTTCAGGCCGAATGAAGCGATAACGCCAGCAGACAGACAAGCGGTAATGGCGAAAATGACCGCCAAACGACATCGGCTGGAATCGGCGTTGACAGTCGGCGCGACAGAGTTGCAGCGATTCCGCCTTCATGCTCCAGCACGGACCATGCCGTTGATGGAACCGTTACGTCAGGCAGCAGAAAAACTGGCTCAGGCGCAGGCAGATTTAAGCCGCTGCTGA", 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"gene_synonym", + "NP_416575.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76394" + ], + [ + "gene_synonym", + "b2071" + ], + [ + "gene_synonym", + "yegJ" + ] + ], + "dna_sequence": "ATGAAAAAGATATTACTTATGTTGAGTCTGCTATTTTTTACTACCGCGGGCTTTAGTGAAGTTTCGGATACGTTAGTGACGGGAGGTTATGATAAACAAGCGATGTCTGACGCGATTAAACATGCGCGGAAAGAAACCGATAAATTCATCGAGGTTATGAATAAAAAAGATGCCGATACTTTCGCAGTCAAAGCCCCGATAACCGATCACGGAAGAACCGAGCATTTCTGGCTTACGGATGTCACTTATTCTAACGGCATGTTTATTGGCGTAATCAGCAATGACCCTGGTATTGTTACAAACGTAGAATATGGCCAGGAGTGGAAAATCAAGAAAGAAGATATTTCAGACTGGATGTATACGCGCGGGGATAAAATTTACGGCGGTTATACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAA", + "dna_sequence_length": 462, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2056", + "location": [ + [ + "NC_000913", + 2151185, + "+", + 462 + ] + ], + "md5": "1018bde5bccf4ef99069441836d9f8f2", + "parent_gene": "", + "protein_md5": "46a93d64cffcd850934b14e69b2d5f30", + "protein_translation": 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"gene_synonym", + "JW2100" + ], + [ + "gene_synonym", + "NP_416616.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF08" + ], + [ + "gene_synonym", + "apbC" + ], + [ + "gene_synonym", + "b2113" + ], + [ + "gene_synonym", + "mrp" + ] + ], + "dna_sequence": 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2203972, + "+", + 318 + ] + ], + "md5": "5a46d1b4df1eeeb900a6592c28f8ee46", + "parent_gene": "", + "protein_md5": "f20a454183135a492393ec3dfe4801da", + "protein_translation": "MIVQKELVAIYDYEVPVPEDPFSFRLEIHKCSELFTGSVYRLERFRLRPTFHQRDREDADPLINDALIYIRDECIDERKLRGESPETVIAIFNRELQNIFNQEIE", + "protein_translation_length": 105, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007006" + ], + [ + "gene_synonym", + "ECK2111" + ], + [ + "gene_synonym", + "EcoGene:EG11998" + ], + [ + "gene_synonym", + "GI:90111389" + ], + [ + "gene_synonym", + "GeneID:946656" + ], + [ + "gene_synonym", + "JW5349" + ], + [ + "gene_synonym", + "NP_416623.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33348" + ], + [ + "gene_synonym", + "b2119" + ], + [ + "gene_synonym", + "yehL" + ] + ], + "dna_sequence": 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"GI:16130059" + ], + [ + "gene_synonym", + "GeneID:946652" + ], + [ + "gene_synonym", + "JW5350" + ], + [ + "gene_synonym", + "NP_416625.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33352" + ], + [ + "gene_synonym", + "b2121" + ], + [ + "gene_synonym", + "yehP" + ] + ], + "dna_sequence": 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"JW2110" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33353" + ], + [ + "gene_synonym", + "b2122" + ], + [ + "gene_synonym", + "yehQ" + ] + ], + "dna_sequence": "ATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAAGCAATGCCGGTTTTGTTAAGCGCAGTCTTAAGGAACTGGAAAATGGCAACGTCCCGGAGATCAGCCATGAGAACGACGCTTTAATCGCCACCTTCAGTGACGGTGTCCGTACCCAGCTGGCGAACGGCCAGGCACTGAAAGAGGCTCAGTGCAGTTGCGGGGCCAACGGTATGTGCCGTCATCGCGTGATGCTGGTGTTAAGTTATCAACGACTTTGTGCCACCACTCAGTCTACGGAAAAAGAAGAAGAGTGGGATCCGGCAATCTGGCTGGAAGAACTGGCTACCCTTCCCGATGCTACCCGCAAACGCGCACAGGCGCTGGTCGCTAAAGGCATCACCATTGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGTATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCGGTACAGGCCTTCGTCGAGGCCAAAGCGCAGCAAGCAGAATTTAACCATTTAATCTGGCAGATGCGCAGCGAACACGTCACATCATCTGACGATCCGTTTGCCAGCGAAGAAGGCAACGCGTGTCGTCAATATGTTCAGCAATTAAGCCAGACATTATGGCTTGGCGGCATCAGCCAGCCGCTCATCCATTACGAGGCAGCATTCAACCGCGCATTGCAGGCGGCAGAGACCTGCAACTGGCGCTGGGTGAGTGAATCGCTACGGCAACTGCGCGCCAGCGTTGATGCCTTCCACGCCCGCGCCAGCCACTATAATGCCGGAGAATGCTTACATCAGCTTGCGGCATTAAACAGTCGATTAAATTGCGCACAAGAGATGGCCCGGCGCGACAGTATTGGTGAAGTTCCTCCTGTGCCGTGGCGCACGGTCGTTGGCTCTGGCATTGCCGGAGAAGCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTGGCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTACCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCTGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGGCCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATGCGCAGGTCATTAGCGGCGAAGGGGAAGATAATGTGCTGACGTTATCATTACCAGCCTCAGCCAGCGCACCTTATGCCGTTGAACGCATGGCGGCGCTTTTGCAACAAACAGACGACCCCGTGTGTCTGGTTTCTGGCTTTGTCAGTTTTGTTGAAGGGCAATTGACACTGGAACCACGGGTGATGATGACAAAAACCCGTGCCTGGGCGCTGGACGCAGAAACTACGCCTGTGGCACCGCTACCTTCTGCCAGCGTTTTGCCTGTGCCGTCTACTGCTCATCAGTTGCTGATACGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGGCGCTATCAGGAACAGAGTGCTATTGGTCAGGCATAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGGACAATTTCGTAATACAGAAAGCGAGGCACGGGTAGAAGCAATGAATAACGGTGTTTTGCTTTGCGAACAATTATTCCCCATGCTTCAGCAACAAGGATGA", 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"ASAP:ABE-0007018" + ], + [ + "gene_synonym", + "ECK2115" + ], + [ + "gene_synonym", + "EcoGene:EG12004" + ], + [ + "gene_synonym", + "GI:90111391" + ], + [ + "gene_synonym", + "GeneID:949023" + ], + [ + "gene_synonym", + "JW5351" + ], + [ + "gene_synonym", + "NP_416627.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33354" + ], + [ + "gene_synonym", + "b2123" + ], + [ + "gene_synonym", + "yehR" + ] + ], + "dna_sequence": "ATGAAGGCTTTCAATAAGCTGTTTTCCCTCGTTGTTGCATCTGTTCTGGTTTTCTCTCTTGCTGGCTGCGGTGACAAAGAAGAATCGAAGAAATTCAGCGCCAATCTGAACGGCACTGAAATTGCCATTACCTATGTCTACAAAGGTGACAAGGTGCTTAAGCAATCTTCTGAAACCAAAATTCAATTTGCCTCCATTGGTGCAACCACCAAAGAAGATGCTGCCAAGACACTTGAGCCGTTAAGCGCCAAATACAAAAACATCGCGGGTGTTGAAGAAAAATTAACCTATACCGATACCTACGCGCAGGAAAACGTGACTATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTCTGCTGAAGATGCCAAAAAAGGTATCACTATGGCGCAAATGGAACTGGTGATGAAAGCCGCTGGTTTTAAAGAAGTGAAATAA", + "dna_sequence_length": 462, + "functions": [ + "lipoprotein, DUF1307 family" + ], + "id": "CDS_2107", + "location": [ + [ + "NC_000913", + 2211225, + "+", + 462 + ] + ], + "md5": "9f96de3d960fcc12d450342b0c31858a", + "parent_gene": "", + "protein_md5": "70e035becaca35b0101d7a06420dd380", + "protein_translation": "MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASIGATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYAQENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007021" + ], + [ + "gene_synonym", + "ECK2116" + ], + [ + "gene_synonym", + "EcoGene:EG12005" + ], + [ + "gene_synonym", + "GI:16130062" + ], + [ + "gene_synonym", + "GeneID:949026" + ], + [ + "gene_synonym", + "JW2112" + ], + [ + "gene_synonym", + "NP_416628.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33355" + ], + [ + "gene_synonym", + "b2124" + ], + [ + "gene_synonym", + "yehS" + ] + ], + "dna_sequence": "ATGCTAAGTAACGATATTCTGCGCAGCGTGCGCTACATTTTGAAAGCCAATAATAATGACCTGGTGCGTATTCTGGCGCTGGGTAATGTCGAAGCCACCGCGGAACAGATCGCCGTCTGGCTACGTAAAGAAGACGAAGAGGGTTTTCAGCGTTGTCCGGACATTGTTTTGTCGTCATTCCTCAATGGCCTGATTTATGAAAAACGCGGCAAGGATGAGTCTGCTCCGGCACTGGAGCCGGAACGTCGCATTAATAACAACATCGTGCTGAAAAAATTACGCATCGCGTTTTCGCTGAAAACCGATGACATTCTGGCTATCCTCACCGAACAGCAGTTCCGCGTTTCGATGCCGGAAATTACAGCGATGATGCGCGCACCGGATCATAAAAACTTCCGCGAATGCGGCGATCAATTTTTACGTTATTTTCTGCGTGGACTGGCAGCGCGCCAGCATGTGAAAAAAGGCTAA", + "dna_sequence_length": 471, + "functions": [ + "DUF1456 family protein" + ], + "id": "CDS_2108", + "location": [ + [ + "NC_000913", + 2212196, + "-", + 471 + ] + ], + "md5": "779cb539513054fa394d5ceceff9e558", + "parent_gene": "", + "protein_md5": "7e790bdc7dbdf627c044ae7d61b77adf", + "protein_translation": "MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKEDEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTDDILAILTEQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKG", + "protein_translation_length": 156, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007023" + ], + [ + "gene_synonym", + "ECK2117" + ], + [ + "gene_synonym", + "EcoGene:EG12006" + ], + [ + "gene_synonym", + "GI:90111392" + ], + [ + "gene_synonym", + "GeneID:949024" + ], + [ + "gene_synonym", + "JW5352" + ], + [ + "gene_synonym", + "NP_416629.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFT5" + ], + [ + "gene_synonym", + "b2125" + ], + [ + "gene_synonym", + "yehT" + ] + ], + "dna_sequence": "ATGATTAAAGTCTTAATTGTCGATGATGAACCGTTAGCACGGGAGAACCTGCGTGTATTTTTGCAGGAGCAGAGCGATATTGAAATCGTTGGAGAGTGTTCAAACGCCGTGGAAGGGATCGGCGCGGTGCATAAACTGCGCCCGGATGTGCTGTTTCTCGATATCCAGATGCCGCGCATCAGTGGTCTGGAAATGGTGGGGATGCTTGACCCGGAACATCGCCCGTATATTGTTTTTCTCACTGCGTTTGACGAATACGCAATTAAAGCCTTTGAAGAACATGCCTTTGATTATCTGCTGAAGCCAATTGATGAAGCGCGACTGGAGAAAACGCTGGCGCGATTGCGTCAGGAGCGCAGCAAGCAGGATGTTTCGCTGTTACCGGAAAATCAACAGGCGCTGAAATTTATCCCTTGTACGGGGCATAGTCGGATTTATTTGCTGCAAATGAAAGATGTGGCATTTGTCAGCAGTCGGATGAGCGGTGTCTACGTTACCAGCCACGAAGGGAAAGAGGGCTTTACCGAATTGACATTACGTACCCTGGAAAGTCGTACACCACTACTGCGCTGCCATCGTCAGTATCTGGTTAACCTCGCGCATTTACAGGAGATTCGTCTGGAAGATAACGGCCAGGCCGAGTTGATTTTGCGTAATGGCTTAACCGTGCCGGTCAGCCGCCGTTATCTGAAAAGCTTAAAAGAGGCGATTGGCCTGTAA", + "dna_sequence_length": 720, + "functions": [ + "putative response regulator in two-component system withYehU" + ], + "id": "CDS_2109", + "location": [ + [ + "NC_000913", + 2212962, + "-", + 720 + ] + ], + "md5": "515a48430e170f2e76023854b9c5f83a", + "parent_gene": "", + 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"gene_synonym", + "GI:16130071" + ], + [ + "gene_synonym", + "GeneID:946653" + ], + [ + "gene_synonym", + "JW2121" + ], + [ + "gene_synonym", + "NP_416637.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06149" + ], + [ + "gene_synonym", + "b2133" + ], + [ + "gene_synonym", + "dld" + ] + ], + "dna_sequence": 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"ATGCCGAAATTTCGAGTTTCTTTATTTAGCCTGGCCCTGATGCTGGCTGTGCCTTTTGCACCGCAGGCCGTTGCGAAAACGGCAGCCGCTACCACCGCTTCACAACCGGAAATTGCCTCCGGTAGCGCGATGATTGTTGATCTGAATACCAACAAAGTGATCTATTCGAACCACCCGGATCTGGTGCGTCCGATTGCGTCTATCAGCAAATTAATGACCGCGATGGTTGTGCTGGATGCACGACTGCCGCTGGATGAAAAACTAAAAGTGGATATCAGCCAGACGCCGGAGATGAAAGGGGTCTATTCGCGCGTACGACTGAATAGCGAAATCAGCCGTAAAGATATGCTGTTGCTGGCGCTGATGTCTTCAGAAAACCGCGCGGCGGCAAGCCTTGCGCACCATTATCCCGGTGGTTACAAAGCCTTTATTAAGGCAATGAATGCGAAAGCGAAATCGCTCGGAATGAACAACACGCGCTTTGTTGAACCTACCGGATTGTCGGTGCATAACGTTTCAACTGCCCGTGACTTAACCAAACTGCTCATTGCCAGCAAACAATATCCGTTGATCGGGCAGTTAAGTACTACCCGGGAAGATATGGCAACCTTCTCTAATCCGACGTATACGCTGCCGTTCCGCAATACTAATCATCTGGTGTATCGCGATAACTGGAATATTCAGTTAACCAAAACCGGCTTTACCAATGCGGCGGGCCATTGTCTGGTGATGCGTACGGTTATCAATAATAAACCGGTGGCGCTGGTAGTGATGGACGCGTTTGGCAAATATACCCATTTTGCCGATGCCAGCCGCCTGCGTACCTGGATTGAAACCGGTAAAGTGATGCCTGTGCCGGCAGCAGCGTTGAGCTATAAAAAACAAAAAGCCGCCCAAATGGCGGCGGCGGGGCAGACGGCACAGAACGATTAA", + "dna_sequence_length": 933, + "functions": [ + "D-alanyl-D-alanine endopeptidase" + ], + "id": "CDS_2119", + "location": [ + [ + "NC_000913", + 2224870, + "-", + 933 + ] + ], + "md5": "2f0b1b300a0182ab280e26278f228b64", + "parent_gene": "", + "protein_md5": "bd4a08d67c52714fec8b4e9aec6326ef", + "protein_translation": "MPKFRVSLFSLALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKGVYSRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNHLVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTWIETGKVMPVPAAALSYKKQKAAQMAAAGQTAQND", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007053" + ], + [ + "gene_synonym", + "ECK2128" + ], + [ + "gene_synonym", + "EcoGene:EG12016" + ], + [ + "gene_synonym", + "GI:90111394" + ], + [ + "gene_synonym", + "GeneID:946666" + ], + [ + "gene_synonym", + "JW5356" + ], + [ + "gene_synonym", + "NP_416639.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD17" + ], + [ + "gene_synonym", + "b2135" + ], + [ + "gene_synonym", + "yohC" + ] + ], + "dna_sequence": "ATGAGCCATGTCTGGGGACTGTTTTCCCATCCCGATCGTGAAATGCAGGTGATTAATCGCGAAAACGAAACGATTTCTCACCATTACACCCACCACGTTTTGCTGATGGCGGCGATTCCGGTGATTTGCGCCTTCATTGGCACTACACAGATTGGCTGGAATTTTGGCGATGGCACTATCCTGAAGTTATCCTGGTTTACCGGACTGGCGCTGGCTGTCTTGTTTTACGGCGTTATGCTGGCTGGGGTCGCGGTGATGGGGCGGGTCATCTGGTGGATGGCGCGTAATTATCCGCAGCGTCCGTCACTTGCGCACTGCATGGTCTTCGCGGGCTACGTTGCAACTCCGCTGTTTTTAAGCGGTCTGGTGGCGCTTTATCCACTGGTCTGGTTGTGTGCGCTGGTCGGCACGGTGGCGCTGTTTTACACCGGCTACCTGCTTTACCTTGGTATTCCGAGCTTCCTGAATATCAACAAAGAGGAAGGCCTTAGCTTCTCTAGTTCGACGCTGGCGATTGGCGTGCTGGTACTGGAAGTGCTGCTCGCCCTAACCGTTATACTATGGGGCTACGGTTATCGTTTGTTCTAG", + "dna_sequence_length": 588, + "functions": [ + "Yip1 family inner membrane protein" + ], + "id": "CDS_2120", + "location": [ + [ + "NC_000913", + 2225631, + "-", + 588 + ] + ], + "md5": "9046e20e1756807ab62c254bed7c1f7f", + "parent_gene": "", + "protein_md5": "dacf8958b65df1f1a5cefd58154fc07b", + "protein_translation": "MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF", + "protein_translation_length": 195, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007059" + ], + [ + "gene_synonym", + "ECK2129" + ], + [ + "gene_synonym", + "EcoGene:EG12017" + ], + [ + "gene_synonym", + "GI:90111395" + ], + [ + "gene_synonym", + "GeneID:946661" + ], + [ + "gene_synonym", + "JW2124" + ], + [ + "gene_synonym", + "NP_416640.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33366" + ], + [ + "gene_synonym", + "b2136" + ], + [ + "gene_synonym", + "yohD" + ] + ], + "dna_sequence": "ATGGATCTCAATACACTTATCTCACAATATGGTTATGCCGCGCTGGTGATCGGTAGCCTGGCGGAAGGTGAAACCGTGACTTTGCTGGGAGGCGTTGCGGCGCATCAGGGGCTATTAAAGTTCCCGCTGGTGGTACTTTCTGTGGCGCTTGGCGGCATGATTGGCGACCAGGTGCTCTATCTGTGCGGGCGGCGGTTTGGCGGCAAGCTGTTACGCCGTTTCTCGAAACATCAGGATAAAATTGAGCGGGCGCAGAAACTTATCCAACGCCATCCGTATCTGTTTGTCATTGGTACGCGCTTTATGTATGGCTTTCGGGTGATTGGCCCGACGCTGATTGGTGCCAGCCAGCTGCCGCCGAAAATCTTTCTGCCGCTGAATATTCTCGGCGCATTTGCCTGGGCGTTGATTTTTACCACTATTGGTTACGCTGGTGGTCAGGTGATTGCGCCGTGGTTGCACAATCTCGACCAGCATTTGAAGCACTGGGTCTGGTTGATTCTGGTCGTGGTTCTGGTGGTGGGCGTGCGCTGGTGGCTGAAACGACGCGGGAAGAAAAAGCCGGATCATCAGGCGTAA", + "dna_sequence_length": 579, + "functions": [ + "DedA family inner membrane protein" + ], + "id": "CDS_2121", + "location": [ + [ + "NC_000913", + 2225801, + "+", + 579 + ] + ], + "md5": "a034adac4ad03b1595f0eb2a0c581a86", + "parent_gene": "", + "protein_md5": "bd746f031ac35e4941f4f42ebd2ec376", + "protein_translation": "MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLVVLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHLKHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA", + "protein_translation_length": 192, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007062" + ], + [ + "gene_synonym", + "ECK2130" + ], + [ + "gene_synonym", + "EcoGene:EG12019" + ], + [ + "gene_synonym", + "GI:16130075" + ], + [ + "gene_synonym", + "GeneID:949126" + ], + [ + "gene_synonym", + "JW2125" + ], + [ + "gene_synonym", + "NP_416641.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33368" + ], + [ + "gene_synonym", + "b2137" + ], + [ + "gene_synonym", + "yohE" + ], + [ + "gene_synonym", + "yohF" + ] + ], + "dna_sequence": "ATGGCACAGGTTGCGATTATTACCGCCTCCGATTCGGGGATCGGCAAAGAGTGCGCGTTATTACTGGCGCAGCAGGGGTTTGATATTGGTATTACCTGGCACTCAGATGAAGAAGGGGCAAAAGATACCGCGCGTGAGGTAGTTAGCCACGGCGTACGTGCGGAGATCGTGCAGCTGGATCTCGGCAATCTACCAGAAGGGGCACTGGCGCTGGAGAAACTCATTCAACGGCTGGGGCGCATTGATGTGCTGGTGAATAATGCGGGTGCAATGACCAAAGCGCCGTTTCTTGATATGGCTTTTGATGAGTGGCGCAAGATTTTTACCGTTGATGTCGATGGTGCATTCTTATGCTCGCAAATTGCGGCTCGTCAGATGGTGAAACAAGGGCAGGGCGGTCGCATCATCAACATTACGTCGGTACATGAACATACGCCGCTGCCGGATGCCAGCGCCTACACAGCCGCTAAACATGCGCTCGGTGGGTTAACCAAAGCGATGGCGCTGGAGCTGGTCAGGCATAAGATTTTGGTGAACGCAGTCGCGCCTGGGGCGATCGCCACGCCAATGAATGGCATGGATGACAGCGACGTGAAGCCCGACGCGGAGCCTTCGATTCCCTTGCGGCGTTTTGGCGCAACGCATGAGATTGCCAGCCTGGTGGTGTGGCTTTGTTCGGAGGGCGCAAATTACACCACCGGGCAGTCGTTGATAGTGGATGGCGGCTTTATGTTGGCGAATCCACAGTTCAACCCAGAATAG", + "dna_sequence_length": 762, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_2122", + "location": [ + [ + "NC_000913", + 2227270, + "-", + 762 + ] + ], + "md5": "0c9644b17bfa236d0516c27bcb918c26", + "parent_gene": "", 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"gene_synonym", + "GI:16130090" + ], + [ + "gene_synonym", + "GeneID:949044" + ], + [ + "gene_synonym", + "JW2139" + ], + [ + "gene_synonym", + "NP_416657.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25747" + ], + [ + "gene_synonym", + "b2152" + ], + [ + "gene_synonym", + "yeiB" + ] + ], + "dna_sequence": 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I" + ], + "id": "CDS_2138", + "location": [ + [ + "NC_000913", + 2243652, + "-", + 669 + ] + ], + "md5": "ab4f70f71144a02d1b8f7c419c262afe", + "parent_gene": "", + "protein_md5": "2c242910cb3cdf4137502dac1ebc7215", + "protein_translation": "MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHMTEIMQLLNLDLADDSLMETPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQILIALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAVRHHN", + "protein_translation_length": 222, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007124" + ], + [ + "gene_synonym", + "ECK2147" + ], + [ + "gene_synonym", + "EcoGene:EG12026" + ], + [ + "gene_synonym", + "GI:16130092" + ], + [ + "gene_synonym", + "GeneID:949045" + ], + [ + "gene_synonym", + "JW2141" + ], + [ + "gene_synonym", + "NP_416659.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33018" + ], + [ + "gene_synonym", + "b2154" + ], + [ + "gene_synonym", + "yeiG" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P30235" + ], + [ + "gene_synonym", + "b2166" + ], + [ + "gene_synonym", + "pscK" + ], + [ + "gene_synonym", + "psuK" + ], + [ + "gene_synonym", + "yeiC" + ] + ], + "dna_sequence": 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"pseudouridine kinase" + ], + "id": "CDS_2151", + "location": [ + [ + "NC_000913", + 2259296, + "-", + 942 + ] + ], + "md5": "40ac8285bd8840ddc565241452197406", + "parent_gene": "", + "protein_md5": "7bd5eb95b9c853157f4cb3a020d91cb2", + "protein_translation": "MREKDYVVIIGSANIDVAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMNISNAITAEYLAQHGEFIQRAKVIVADCNISEEALAWILDNAANVPVFVDPVSAWKCVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGGDGVYYSDISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSSMALSCEYTNNPDLSIANVISLVENAECLN", + "protein_translation_length": 313, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007172" + ], + [ + "gene_synonym", + "ECK2160" + ], + [ + "gene_synonym", + "EcoGene:EG10336" + ], + [ + "gene_synonym", + "GI:16130105" + ], + [ + "gene_synonym", + "GeneID:946672" + ], + [ + "gene_synonym", + "JW2154" + ], + [ + "gene_synonym", + "NP_416672.1" + ], + [ + "gene_synonym", + 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"gene_synonym", + "ECK2175" + ], + [ + "gene_synonym", + "EcoGene:EG12042" + ], + [ + "gene_synonym", + "GI:16130119" + ], + [ + "gene_synonym", + "GeneID:945319" + ], + [ + "gene_synonym", + "JW2169" + ], + [ + "gene_synonym", + "NP_416686.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD21" + ], + [ + "gene_synonym", + "b2181" + ], + [ + "gene_synonym", + "yejG" + ] + ], + "dna_sequence": "GTGACTTCATTACAACTCTCAATCGTCCATCGACTGCCGCAGAACTATCGCTGGTCTGCTGGTTTCGCAGGTTCGAAGGTTGAACCGATTCCGCAAAATGGACCGTGCGGTGACAACAGCCTGGTGGCGCTTAAATTGCTTAGCCCGGATGGTGATAATGCATGGTCGGTGATGTATAAACTAAGCCAGGCGTTAAGCGACATCGAAGTTCCATGTTCGGTGCTGGAGTGTGAAGGTGAGCCGTGCCTGTTTGTAAATCGCCAGGACGAGTTTGCTGCAACATGCCGATTGAAAAATTTTGGTGTGGCAATTGCCGAACCCTTTTCAAACTACAATCCTTTTTAA", + "dna_sequence_length": 345, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2167", + "location": [ + [ + "NC_000913", + 2278237, + "-", + 345 + ] + ], + "md5": "c0ee96572103d3f59c7673496a760b9f", + "parent_gene": "", + "protein_md5": "85d110fcb691b7a499d87f98acd9e2ce", + "protein_translation": "MTSLQLSIVHRLPQNYRWSAGFAGSKVEPIPQNGPCGDNSLVALKLLSPDGDNAWSVMYKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGVAIAEPFSNYNPF", + "protein_translation_length": 114, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007221" + ], + [ + "gene_synonym", + "ECK2176" + ], + [ + "gene_synonym", + "EcoGene:EG11419" + ], + [ + "gene_synonym", + "GI:16130120" + ], + [ + "gene_synonym", + "GeneID:944808" + ], + [ + "gene_synonym", + "JW5363" + ], + [ + "gene_synonym", + "NP_416687.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28246" + ], + [ + "gene_synonym", + "b2182" + ], + [ + "gene_synonym", + "bcr" + ], + [ + "gene_synonym", + "bicA" + ], + [ + "gene_synonym", + "bicR" + ], + [ + "gene_synonym", + "sur" + ], + [ + "gene_synonym", + "suxA" + ] + ], + "dna_sequence": "GTGACCACCCGACAGCATTCGTCGTTTGCTATTGTTTTTATCCTTGGCCTGCTGGCCATGTTGATGCCGCTGTCGATTGATATGTATCTGCCCGCGCTACCGGTAATTTCAGCGCAGTTTGGCGTACCGGCGGGCAGTACGCAGATGACCCTCAGTACTTATATTCTGGGCTTTGCGTTGGGGCAGTTAATCTACGGGCCGATGGCAGACAGCTTCGGGCGTAAGCCGGTGGTGCTCGGCGGTACGCTGGTGTTTGCCGCCGCCGCGGTGGCGTGTGCGTTGGCAAACACCATCGATCAGCTGATTGTGATGCGTTTCTTCCACGGGCTGGCTGCGGCTGCGGCCAGCGTGGTCATTAACGCCCTGATGCGCGATATTTACCCGAAAGAAGAGTTCTCGCGGATGATGTCGTTTGTCATGCTGGTGACAACCATTGCACCGCTGATGGCACCGATAGTTGGCGGCTGGGTGCTGGTGTGGCTGAGCTGGCATTACATCTTCTGGATCCTGGCATTAGCGGCGATTCTGGCTTCGGCAATGATTTTCTTCCTGATTAAAGAAACCTTACCACCGGAGCGTCGTCAGCCATTTCACATTCGTACCACTATTGGTAACTTTGCGGCGCTGTTCCGCCATAAACGTGTCCTGAGCTACATGCTTGCCAGTGGTTTCAGCTTTGCCGGGATGTTCTCATTCTTAAGCGCCGGACCGTTTGTTTATATTGAAATTAACCACGTCGCGCCGGAAAACTTTGGTTATTACTTTGCGCTAAACATTGTTTTTCTGTTCGTGATGACCATCTTTAACAGCCGCTTCGTCCGCCGCATTGGCGCGTTAAATATGTTCCGCTCGGGGTTGTGGATACAATTTATTATGGCAGCGTGGATGGTCATCAGTGCGCTGCTGGGGCTGGGATTTTGGTCGCTGGTGGTTGGCGTTGCGGCGTTTGTGGGCTGCGTGTCGATGGTGTCATCCAATGCGATGGCGGTCATTCTTGATGAGTTTCCCCATATGGCGGGAACGGCATCTTCGCTGGCAGGAACCTTCCGTTTTGGCATAGGGGCAATTGTTGGCGCATTGCTTTCTCTTGCGACCTTTAACTCTGCATGGCCGATGATTTGGTCAATTGCATTCTGCGCAACCAGCTCCATTCTCTTCTGTCTGTACGCCAGTCGGCCGAAAAAACGGTGA", 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+ ], + [ + "gene_synonym", + "NP_416692.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD24" + ], + [ + "gene_synonym", + "b2187" + ], + [ + "gene_synonym", + "yejL" + ] + ], + "dna_sequence": "ATGCCACAAATTTCCCGCTACAGTGATGAACAGGTTGAACAATTGCTCGCAGAGCTGCTCAACGTACTGGAAAAACATAAGGCTCCGACCGACCTTTCCCTGATGGTGTTAGGCAACATGGTCACTAACCTTATCAACACCAGCATTGCCCCGGCCCAACGCCAGGCAATTGCCAACTCTTTTGCCCGCGCCTTACAGTCCTCTATCAACGAAGACAAAGCGCACTAA", + "dna_sequence_length": 228, + "functions": [ + "UPF0352 family protein" + ], + "id": "CDS_2173", + "location": [ + [ + "NC_000913", + 2284129, + "+", + 228 + ] + ], + "md5": "8bb93ff0c9fdc7b67090a16e0b8498da", + "parent_gene": "", + "protein_md5": "36e730ae4c428e9a0ba546ba875139de", + "protein_translation": "MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNLINTSIAPAQRQAIANSFARALQSSINEDKAH", + "protein_translation_length": 75, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007240" + ], + [ + "gene_synonym", + "ECK2182" + ], + [ + "gene_synonym", + "EcoGene:EG12049" + ], + [ + "gene_synonym", + "GI:16130126" + ], + [ + "gene_synonym", + "GeneID:946685" + ], + [ + "gene_synonym", + "JW2176" + ], + [ + "gene_synonym", + "NP_416693.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD27" + ], + [ + "gene_synonym", + "b2188" + ], + [ + "gene_synonym", + "yejM" + ], + [ + "gene_synonym", + "yejN" + ] + ], + "dna_sequence": 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"protein_translation_length": 586, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007244" + ], + [ + "gene_synonym", + "ECK2184" + ], + [ + "gene_synonym", + "EcoGene:EG12051" + ], + [ + "gene_synonym", + "GeneID:946867" + ], + [ + "gene_synonym", + "JW5839" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33924" + ], + [ + "gene_synonym", + "b2190" + ], + [ + "gene_synonym", + "yejO" + ] + ], + "dna_sequence": "ATGCATCAATCTGGTTCTGTTTCTCTTTGTCGTTCCGCAATATCTGTTCTGGTGGCTACAGCGTTATATTCACCCATAGCATTGGCATCAACTGTTGAGTATGGTGAGACAGTTGATGGTGTTGTCCTGGAAAAAGATATCCAGCTGGTTTATGGGACCGCCAATAATACGAAAATCAATCCTGGCGGAGAACAGCATATAAAAGAATTTGGTGTAAGTAATAATACTGAAATTAACGGAGGGTATCAGTACATTGAAATGAATGGCGCCGCAGAATACTCAGTATTAAATGACGGTTATCAAATTGTTCAAATGGGTGGCGCGGCAAACCAGACTACGCTCAATAATGGTGTGCTACAGGTTTATGGCGCAGCGAATGATACCACGATTAAAGGCGGGCGCTTAATCGTTGAAAAAGATGGGGGGGCCGTCTTTGTCGCTATCGAAAAGGGAGGACTACTGGAGGTTAAAGAGGGGGGATTTGCATTTGCGGTAGATCAGAAAGCAGGCGGTGCTATTAAAACAACCACGCGGGCCATGGAGGTATTCGGAACAAACCGTCTCGGTCAGTTCGATATCAAGAATGGTATTGCTAATAATATGTTGTTGGAAAACGGCGGAAGTTTGCGAGTTGAAGAAAATGACTTCGCTTATAATACCACTGTAGATAGTGGCGGCTTACTGGAGGTTATGGATGGCGGGACTGTAACTGGCGTTGATAAAAAAGCAGGCGGAAAATTAATTGTCTCAACGAATGCGCTGGAAGTGAGTGGTCCAAACAGTAAAGGCCAATTTAGTATAAAAGATGGTGTGTCAAAAAATTATGAACTGGATGATGGTTCCGGGCTCATTGTTATGGAGGACACGCAGGCCATTGATACTATCCTTGATAAGCATGCCACTATGCAATCGCTGGGAAAGGATACTGGTACGAAAGTGCAGGCAAATGCGGTATATGATCTCGGTCGATCATATCAGAATGGAAGTATCACGTATTCCTCAAAAGCCATCTCTGAAAATATGGTTATCAACAATGGCCGCGCTAACGTCTGGGCTGGCACAATGGTTAACGTTTCAGTCAGAGGGAATGATGGCATTCTTGAGGTCATGAAGCCGCAAATAAATTATGCACCCGCAATGTTGGTGGGTAAGGTAGTGGTTTCTGAGGGCGCTTCTTTTAGAACGCATGGTGCCGTGGATACCAGCAAAGCGGACGTTTCGCTCGAAAATAGCGTATGGACCATCATTGCCGATATCACTACGACGAACCAAAACACCCTCCTCAACTTAGCCAACCTTGCGATGTCTGACGCAAATGTGATTATGATGGATGAGCCAGTGACTCGTTCATCAGTGACGGCAAGTGCGGAAAATTTCATTACGTTGACCACCAATACCCTGTCGGGAAACGGCAATTTTTATATGCGTACCGATATGGCTAATCATCAGAGCGATCAGCTCAACGTCACCGGTCAGGCAACAGGTGATTTCAAAATATTCGTGACGGACACCGGTGCCAGCCCGGCAGCAGGAGATAGCCTTACACTGGTAACAACGGGCGGCGGTGATGCTGCATTTACGTTGGGCAATGCCGGAGGCGTTGTTGATATCGGTACGTATGAATATACCTTGCTGGATAATGGCAACCATAGCTGGAGTCTGGCAGAGAATCGCGCGCAAATTACCCCTTCAACCACTGATGTGCTGAATATGGCGGCCGCACAACCGCTGGTATTTGATGCAGAACTGGACACCGTGCGTGAGCGTCTTGGTAGCGTAAAAGGCGTTAGTTACGATACGGCGATGTGGAGTTCGGCAATTAACACCCGCAACAACGTGACCACTGATGCGGGAGCTGGTTTTGAGCAAACATTGACGGGCCTGACGCTCGGTATCGATAGCCGTTTCTCCCGTGAAGAAAGCAGTACAATTCGCGGCTTGATCTTTGGTTACTCTCATTCTGATATTGGTTTTGATCGCGGCGGCAAAGGTAATATCGATAGCTATACCCTGGGGGCTTATGCCGGTTGGGAGCATCAGAACGGTGCCTATGTTGATGGGGTGGTGAAAGTTGACCGTTTTGCCAACACCATCCATGGCAAGATGAGTAATGGGGCAACAGCGTTTGGCGATTACAATAGTAACGGCGCGGGTGCTCATGTTGAGAGCGGGTTCCGTTGGGTTGACGGATTGTGGAGTGTTAGACCCTATCTGGCCTTTACCGGCTTTACCACAGATGGTCAGGACTACACGTTATCAAACGGCATGCGCGCGGATGTGGGAAATACCCGGATATTACGCGCTGAAGCGGGAACGGCGGTAAGCTATCACATGGACCTGCAAAACGGTACGACGCTGGAACCCTGGCTGAAAGCGGCCGTGCGTCAGGAATACGCCGATTCTAACCAGGTGAAAGTTAATGACGATGGCAAATTTAATAATGATGTGGCTGGAACCAGTGGCGTTTATCAGGCTGGTATAAGGTCATCGTTTACCCCGACGTTAAGCGGTCATTTGTCAGTCAGCTATGGCAATGGCGCAGGGGTAGAATCGCCGTGGAATACTCAGGCGGGTGTGGTCTGGACGTTCTGA", 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"MHQSGSVSLCRSAISVLVATALYSPIALASTVEYGETVDGVVLEKDIQLVYGTANNTKINPGGEQHIKEFGVSNNTEINGGYQYIEMNGAAEYSVLNDGYQIVQMGGAANQTTLNNGVLQVYGAANDTTIKGGRLIVEKDGGAVFVAIEKGGLLEVKEGGFAFAVDQKAGGAIKTTTRAMEVFGTNRLGQFDIKNGIANNMLLENGGSLRVEENDFAYNTTVDSGGLLEVMDGGTVTGVDKKAGGKLIVSTNALEVSGPNSKGQFSIKDGVSKNYELDDGSGLIVMEDTQAIDTILDKHATMQSLGKDTGTKVQANAVYDLGRSYQNGSITYSSKAISENMVINNGRANVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGKVVVSEGASFRTHGAVDTSKADVSLENSVWTIIADITTTNQNTLLNLANLAMSDANVIMMDEPVTRSSVTASAENFITLTTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGASPAAGDSLTLVTTGGGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLVFDAELDTVRERLGSVKGVSYDTAMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESSTIRGLIFGYSHSDIGFDRGGKGNIDSYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDGQDYTLSNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNQVKVNDDGKFNNDVAGTSGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF", + "protein_translation_length": 863, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007252" + ], + [ + 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"ATGAAAGTTAAAGTACTGTCCCTCCTGGTCCCAGCTCTGCTGGTAGCAGGCGCAGCAAACGCTGCTGAAGTTTACAACAAAGACGGCAACAAATTAGATCTGTACGGTAAAGTAGACGGCCTGCACTATTTCTCTGACAACAAAGATGTAGATGGCGACCAGACCTACATGCGTCTTGGCTTCAAAGGTGAAACTCAGGTTACTGACCAGCTGACCGGTTACGGCCAGTGGGAATATCAGATCCAGGGCAACAGCGCTGAAAACGAAAACAACTCCTGGACCCGTGTGGCATTCGCAGGTCTGAAATTCCAGGATGTGGGTTCTTTCGACTACGGTCGTAACTACGGCGTTGTTTATGACGTAACTTCCTGGACCGACGTACTGCCAGAATTCGGTGGTGACACCTACGGTTCTGACAACTTCATGCAGCAGCGTGGTAACGGCTTCGCGACCTACCGTAACACTGACTTCTTCGGTCTGGTTGACGGCCTGAACTTTGCTGTTCAGTACCAGGGTAAAAACGGCAACCCATCTGGTGAAGGCTTTACTAGTGGCGTAACTAACAACGGTCGTGACGCACTGCGTCAAAACGGCGACGGCGTCGGCGGTTCTATCACTTATGATTACGAAGGTTTCGGTATCGGTGGTGCGATCTCCAGCTCCAAACGTACTGATGCTCAGAACACCGCTGCTTACATCGGTAACGGCGACCGTGCTGAAACCTACACTGGTGGTCTGAAATACGACGCTAACAACATCTACCTGGCTGCTCAGTACACCCAGACCTACAACGCAACTCGCGTAGGTTCCCTGGGTTGGGCGAACAAAGCACAGAACTTCGAAGCTGTTGCTCAGTACCAGTTCGACTTCGGTCTGCGTCCGTCCCTGGCTTACCTGCAGTCTAAAGGTAAAAACCTGGGTCGTGGCTACGACGACGAAGATATCCTGAAATATGTTGATGTTGGTGCTACCTACTACTTCAACAAAAACATGTCCACCTACGTTGACTACAAAATCAACCTGCTGGACGACAACCAGTTCACTCGTGACGCTGGCATCAACACTGATAACATCGTAGCTCTGGGTCTGGTTTACCAGTTCTAA", 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"gene_synonym", + "JW2204" + ], + [ + "gene_synonym", + "NP_416720.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39838" + ], + [ + "gene_synonym", + "b2216" + ], + [ + "gene_synonym", + "rcsD" + ], + [ + "gene_synonym", + "yojN" + ], + [ + "gene_synonym", + "yojP" + ], + [ + "gene_synonym", + "yojQ" + ] + ], + "dna_sequence": "ATGCGTCAGAAAGAGACAACGGCCACGACCCGCTTTTCACTCCTACCGGGGAGCATTACCCGCTTCTTTTTACTGTTGATCATTGTGTTACTGGTGACGATGGGTGTAATGGTACAAAGCGCCGTTAACGCCTGGCTGAAAGATAAAAGTTACCAGATTGTCGACATTACCCATGCTATCCAAAAGCGCGTCGATAACTGGCGTTACGTGACCTGGCAGATCTACGACAACATTGCCGCGACGACCTCCCCCTCCTCCGGCGAAGGTTTACAAGAGACGCGCCTGAAACAGGATGTCTACTATCTGGAGAAACCACGCCGCAAAACGGAAGCGTTAATCTTTGGCTCTCACGACAACTCAACGCTTGAGATGACTCAGCGGATGTCCACTTATCTGGATACATTGTGGGGCGCAGAAAATGTACCGTGGTCGATGTATTACCTGAATGGTCAGGATAACAGTCTGGTGCTGATCTCAACCCTACCCCTTAAAGATCTCACCTCCGGATTTAAAGAATCGACCGTCAGCGACATTGTTGATTCACGTCGTGCAGAGATGTTGCAACAGGCCAACGCCCTCGATGAACGCGAAAGCTTTTCTAACATGCGCCGCCTGGCCTGGCAGAACGGTCATTACTTTACATTGCGTACTACCTTTAACCAGCCAGGACATCTGGCAACGGTCGTGGCTTTTGATCTGCCGATTAATGATTTGATCCCACCGGGTATGCCGCTGGACAGTTTCCGCCTTGAGCCAGACGCGACGGCAACGGGAAACAATGATAATGAGAAAGAAGGGACGGATAGCGTCAGTATCCACTTTAACAGTACGAAGATTGAAATCTCCTCGGCACTCAACTCTACCGATATGCGCCTGGTCTGGCAGGTTCCTTATGGCACCTTATTGCTGGATACGTTGCAAAACATTCTGCTGCCACTGCTGCTGAACATCGGTTTGCTGGCGCTGGCGTTATTTGGCTATACCACATTCCGCCATTTCTCCAGCCGCAGTACAGAAAACGTCCCCAGCACGGCGGTCAATAACGAATTGCGCATTTTACGGGCAATCAATGAAGAGATAGTCTCACTGCTGCCGCTCGGCCTGCTGGTTCACGATCAGGAATCGAACCGCACTGTCATAAGTAACAAAATTGCCGATCATTTGCTGCCGCATTTGAATCTGCAAAACATCACCACCATGGCGGAACAGCATCAGGGGATTATTCAGGCGACGATCAATAACGAGCTGTATGAGATCCGCATGTTCCGCAGCCAGGTCGCGCCGCGCACACAAATTTTCATTATTCGCGATCAGGATCGCGAAGTGCTGGTAAACAAGAAACTCAAGCAGGCGCAGCGTCTGTATGAGAAAAACCAGCAGGGGCGGATGATCTTTATGAAAAACATTGGCGATGCGCTGAAAGAACCCGCACAGTCCCTGGCGGAGAGCGCGGCTAAACTCAACGCCCCGGAAAGCAAACAACTGGCGAATCAGGCAGATGTGCTGGTGCGGCTGGTTGATGAAATACAGTTAGCGAACATGCTTGCGGATGATAGCTGGAAAAGTGAGACGGTGCTGTTCTCCGTGCAGGATTTAATTGATGAAGTTGTGCCTTCAGTGTTGCCTGCCATCAAGCGTAAAGGTCTGCAACTGCTGATTAACAATCATCTGAAAGCACACGATATGCGCCGCGGCGATCGCGATGCCTTACGACGTATTTTGCTGCTACTGATGCAATATGCCGTGACCTCAACGCAATTGGGAAAAATCACCCTTGAGGTTGATCAGGATGAGTCCTCCGAAGACCGCCTGACGTTCCGCATTCTGGACACGGGAGAAGGCGTAAGTATTCATGAAATGGATAATTTGCACTTCCCGTTTATCAACCAGACCCAAAACGATCGCTATGGCAAGGCGGACCCGCTGGCATTCTGGCTGAGCGATCAACTGGCACGTAAACTGGGCGGTCATTTAAACATCAAAACGCGGGATGGGCTTGGTACACGCTACTCTGTGCATATCAAAATGCTCGCAGCTGACCCGGAAGTTGAAGAGGAAGAAGAGCGTTTACTGGATGATGTCTGCGTAATGGTGGATGTTACTTCGGCAGAAATTCGGAATATTGTCACTCGCCAGTTAGAAAATTGGGGTGCAACCTGTATCACACCCGATGAAAGATTAATTAGTCAAGATTATGATATCTTTTTAACGGATAATCCGTCTAATCTTACTGCCTCTGGCTTGCTTTTAAGCGATGATGAGTCTGGCGTACGGGAAATTGGGCCTGGTCAATTGTGCGTCAACTTCAATATGAGCAACGCTATGCAGGAAGCGGTCTTACAATTAATTGAAGTGCAACTGGCGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGCGGCTATTATGCGCTCTTTGTAGACACAGTACCGGATGATGTTAAGAGGCTGTATACTGAAGCAGCAACCAGTGACTTTGCTGCGTTAGCCCAAACGGCTCATCGTCTTAAAGGCGTATTTGCCATGCTAAATCTGGTACCCGGCAAGCAGTTATGTGAAACGCTGGAACATCTGATTCGTGAGAAGGATGTTCCAGGAATAGAAAAATACATCAGCGACATTGACAGTTATGTCAAGAGCTTGCTGTAG", 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"MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNAWLKDKSYQIVDITHAIQKRVDNWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYLEKPRRKTEALIFGSHDNSTLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLISTLPLKDLTSGFKESTVSDIVDSRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTTFNQPGHLATVVAFDLPINDLIPPGMPLDSFRLEPDATATGNNDNEKEGTDSVSIHFNSTKIEISSALNSTDMRLVWQVPYGTLLLDTLQNILLPLLLNIGLLALALFGYTTFRHFSSRSTENVPSTAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHLNLQNITTMAEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQAQRLYEKNQQGRMIFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQADVLVRLVDEIQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGDRDALRRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLHFPFINQTQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHIKMLAADPEVEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNPSNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLGGDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL", + "protein_translation_length": 890, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007333" + ], + [ + "gene_synonym", + "ECK2210" + ], + [ + "gene_synonym", + "EcoGene:EG10821" + ], + [ + "gene_synonym", + "GI:16130154" + ], + [ + "gene_synonym", + "GeneID:947441" + ], + [ + "gene_synonym", + "JW2205" + ], + [ + "gene_synonym", + "NP_416721.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69407" + ], + [ + "gene_synonym", + "b2217" + ], + [ + "gene_synonym", + "rcsB" + ], + [ + "gene_synonym", + "viaA" + ] + ], + "dna_sequence": "ATGAACAATATGAACGTAATTATTGCCGATGACCATCCGATAGTCTTGTTCGGTATTCGCAAATCACTTGAGCAAATTGAGTGGGTGAATGTTGTCGGCGAATTTGAAGACTCTACAGCACTGATCAACAACCTGCCGAAACTGGATGCGCATGTGTTGATTACCGATCTCTCCATGCCTGGCGATAAGTACGGCGATGGCATTACCTTAATCAAGTACATCAAGCGCCATTTCCCAAGCCTGTCGATCATTGTTCTGACTATGAACAACAACCCGGCGATTCTTAGTGCGGTATTGGATCTGGATATCGAAGGGATCGTGCTGAAACAAGGTGCACCGACCGATCTGCCGAAAGCTCTCGCCGCGCTGCAGAAAGGGAAGAAATTTACCCCGGAAAGCGTTTCTCGCCTGTTGGAAAAAATCAGTGCTGGTGGTTACGGTGACAAGCGTCTCTCGCCAAAAGAGAGTGAAGTTCTGCGCCTGTTTGCGGAAGGCTTCCTGGTGACCGAGATCGCTAAAAAGCTGAACCGCAGTATTAAAACCATCAGTAGCCAGAAGAAATCTGCGATGATGAAGCTGGGTGTCGAGAACGATATCGCCCTGCTGAATTATCTCTCTTCAGTGACCTTAAGTCCGGCAGATAAAGACTAA", + "dna_sequence_length": 651, + "functions": [ + "response regulator in two-component regulatory system with RcsC and YojN" + ], + "id": "CDS_2201", + "location": [ + [ + "NC_000913", + 2316177, + "+", + 651 + ] + ], + "md5": "6d02d2f75b6b3f3dee5cf962aaa143cc", + "parent_gene": "", + "protein_md5": "a4d0d02728a620eaca1f24bb25ab0c46", + "protein_translation": "MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007336" + ], + [ + "gene_synonym", + "ECK2211" + ], + [ + "gene_synonym", + "EcoGene:EG10822" + ], + [ + "gene_synonym", + "GI:145698285" + ], + [ + "gene_synonym", + "GeneID:948993" + ], + [ + "gene_synonym", + "JW5917" + ], + [ + "gene_synonym", + "JW5920" + ], + [ + "gene_synonym", + "NP_416722.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14376" + ], + [ + "gene_synonym", + "b2218" + ], + [ + "gene_synonym", + "rcsC" + ] + ], + "dna_sequence": "TTGAAATACCTTGCTTCTTTTCGTACAACCCTGAAAGCCTCGCGCTACATGTTCAGAGCATTGGCGTTAGTGCTCTGGCTGTTGATTGCTTTTTCATCCGTTTTTTACATCGTTAATGCGTTACATCAGCGAGAATCGGAAATTCGTCAGGAATTTAATCTGAGTTCCGATCAGGCTCAGCGCTTTATTCAACGCACCTCTGATGTGATGAAAGAGCTGAAGTACATCGCCGAAAATCGCTTATCGGCAGAAAACGGTGTGCTTTCCCCGCGTGGACGAGAAACGCAGGCGGATGTGCCTGCGTTTGAACCGCTGTTTGCCGACTCCGATTGTTCCGCAATGAGTAACACCTGGCGAGGTTCTCTGGAGTCATTGGCGTGGTTTATGCGCTACTGGCGCGATAATTTTTCTGCGGCTTACGATCTAAACCGGGTATTTTTAATCGGCAGCGATAACCTCTGCATGGCCAATTTCGGTCTGCGTGATATGCCAGTGGAACGCGATACCGCGTTGAAAGCTTTGCATGAACGCATCAATAAATATCGAAATGCACCACAAGATGATAGCGGCAGTAACCTCTACTGGATCAGCGAAGGTCCGCGCCCTGGCGTCGGGTATTTTTACGCGTTGACGCCAGTTTATCTGGCGAACCGGTTGCAGGCGCTTTTGGGTGTCGAGCAGACCATCCGGATGGAGAACTTTTTCTTACCGGGTACGTTGCCGATGGGGGTTACCATTCTTGATGAAAATGGTCATACCCTGATTTCGCTTACCGGACCAGAAAGTAAAATTAAGGGCGATCCTCGCTGGATGCAGGAACGCTCCTGGTTTGGCTATACGGAAGGGTTCCGGGAGCTGGTGCTGAAGAAAAATCTGCCACCCTCATCGCTAAGCATCGTGTATTCGGTGCCGGTTGATAAGGTGCTGGAACGCATTCGCATGTTGATCCTTAACGCAATTTTGCTGAATGTGCTTGCCGGAGCTGCATTGTTTACTCTCGCACGGATGTACGAGCGACGTATTTTCATTCCGGCGGAAAGCGACGCCCTGCGACTGGAAGAACATGAGCAGTTCAATCGCAAGATTGTCGCCTCCGCGCCAGTGGGTATCTGCATTTTGCGTACCGCTGATGGCGTCAATATTTTAAGTAACGAACTGGCGCATACCTATCTCAATATGCTTACGCATGAGGACCGCCAACGACTGACGCAAATTATCTGTGGGCAGCAGGTCAATTTTGTTGATGTCCTGACCAGCAACAATACCAATCTGCAAATCAGCTTCGTCCATTCGCGCTATCGTAATGAAAACGTGGCCATTTGTGTGCTGGTGGATGTTTCTTCGCGCGTGAAGATGGAAGAGTCGTTGCAGGAGATGGCACAAGCAGCGGAACAGGCGAGCCAGTCAAAATCGATGTTCCTTGCCACCGTCAGTCATGAGCTGCGAACGCCGCTGTATGGCATTATCGGTAACCTGGATCTGTTGCAAACCAAAGAGTTACCGAAAGGCGTCGATCGGCTGGTGACGGCAATGAACAACTCTTCCAGCCTGTTGTTGAAAATTATCAGCGATATTCTCGATTTCTCGAAGATTGAATCGGAACAGTTGAAGATCGAACCGCGTGAGTTTTCACCGCGTGAAGTGATGAACCACATCACCGCCAACTATTTACCGCTGGTGGTACGCAAGCAGTTAGGCTTGTACTGCTTTATTGAACCGGATGTGCCAGTGGCCTTAAATGGCGACCCGATGCGTTTACAGCAGGTCATCTCCAACCTGTTGAGTAACGCCATAAAATTCACCGATACCGGCTGTATAGTTTTGCATGTTCGCGCGGATGGCGATTATCTCTCTATCCGTGTTCGCGATACCGGCGTGGGGATACCGGCGAAAGAAGTGGTGCGCTTGTTTGATCCCTTCTTCCAGGTCGGAACGGGCGTACAGCGTAATTTCCAGGGGACCGGTCTGGGTCTGGCGATTTGTGAAAAACTGATCAGCATGATGGACGGCGATATCTCGGTAGATTCAGAACCGGGAATGGGCAGCCAGTTTACCGTGCGTATTCCGTTGTACGGCGCTCAGTACCCGCAGAAAAAAGGCGTGGAAGGGTTGAGTGGTAAACGCTGCTGGCTGGCGGTCCGCAATGCGTCGCTCTGTCAGTTCCTGGAAACCAGTTTGCAGCGCAGCGGCATCGTCGTTACAACATACGAAGGGCAGGAACCGACTCCCGAAGATGTGTTGATCACTGACGAGGTAGTGAGTAAAAAATGGCAGGGCAGAGCGGTAGTGACCTTCTGTCGTCGCCATATTGGTATTCCGCTGGAGAAAGCGCCAGGGGAGTGGGTACACAGTGTGGCTGCTCCGCATGAGCTACCGGCATTGTTGGCGCGTATTTATTTGATCGAGATGGAGAGCGACGATCCTGCTAACGCTCTGCCGTCAACGGACAAAGCGGTCAGCGATAATGACGATATGATGATTCTGGTCGTGGATGATCATCCGATTAACCGGCGTTTGCTGGCAGATCAGTTGGGATCGTTGGGCTATCAATGTAAAACCGCGAATGATGGCGTCGATGCGCTTAATGTACTTAGCAAGAATCATATTGATATCGTGCTTAGCGACGTCAACATGCCAAATATGGATGGTTACCGCTTGACGCAACGCATTCGTCAGTTGGGACTGACGTTGCCGGTAATCGGAGTAACTGCTAATGCGTTGGCTGAAGAGAAGCAGCGGTGTCTGGAGTCCGGTATGGACAGCTGCCTGTCGAAGCCGGTAACGCTGGATGTGATAAAACAGACGCTGACGTTATATGCCGAGAGGGTCAGGAAATCGCGGGATTCGTAG", 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"MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQRESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVPAFEPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGLRDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLANRLQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKGDPRWMQERSWFGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLARMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLNMLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRVKMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQEPTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARIYLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTLYAERVRKSRDS", + "protein_translation_length": 949, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007341" + ], + [ + "gene_synonym", + "ECK2212" + ], + [ + "gene_synonym", + "EcoGene:EG11667" + ], + [ + "gene_synonym", + "GI:16130156" + ], + [ + "gene_synonym", + "GeneID:949011" + ], + [ + "gene_synonym", + "JW2213" + ], + [ + "gene_synonym", + "NP_416723.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q06067" + ], + [ + "gene_synonym", + "atoS" + ], + [ + "gene_synonym", + "b2219" + ] + ], + "dna_sequence": "ATGCATTATATGAAGTGGATTTATCCACGCCGCTTACGCAATCAAATGATCCTGATGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATCGTAGAAACGGAAGGACGTTCAGCAGTCTTATCTGAAAAAGAGAAAAAACTTTCTGCCGTGGTCAACCTGCTTAATCAGGCACTAGGCGATCGCTATGATCTCTACATCGACTTACCACGTGAGGAGCGTATCCGCGCATTAAATGCAGAACTTGCCCCCATTACCGAAAATATCACTCACGCCTTCCCTGGCATCGGTGCTGGTTATTACAACAAAATGCTGGATGCGATAATCACCTACGCGCCTTCAGCGCTATATCAGAATAATGTCGGCGTTACCATTGCCGCAGATCACCCTGGTCGCGAAGTGATGCGTACAAATACCCCTTTAGTTTATTCAGGCAGGCAGGTGCGCGGCGATATTTTGAATTCAATGCTCCCCATTGAGCGTAATGGTGAAATCCTCGGCTATATCTGGGCCAATGAATTAACCGAAGATATTCGCCGCCAGGCCTGGAAAATGGATGTGAGGATTATCATTGTGCTCACCGCTGGTTTGCTGATAAGCCTGCTGTTGATTGTCCTTTTCTCCCGTCGCCTGAGCGCCAATATTGATATCATCACCGATGGCCTCTCGACTCTGGCACAAAATATTCCCACTCGATTACCACAATTGCCCGGTGAAATGGGGCAAATCAGTCAGAGTGTTAATAACCTCGCCCAGGCACTGCGTGAAACGCGGACACTTAACGATCTGATTATTGAAAACGCTGCCGATGGCGTCATTGCCATTGACCGCCAGGGTGATGTAACCACCATGAACCCAGCAGCAGAAGTTATCACTGGCTATCAACGCCATGAACTGGTAGGGCAGCCTTACTCCATGTTGTTCGACAATACTCAGTTCTACAGTCCAGTACTGGATACGCTGGAACATGGCACCGAACATGTGGCGCTGGAGATCAGTTTTCCAGGTCGTGACCGCACCATTGAACTCAGTGTCACTACCAGTCGTATTCATAACACGCACGGTGAAATGATAGGTGCTTTGGTGATTTTCTCTGATTTAACTGCCCGCAAAGAAACCCAGCGCCGCATGGCGCAAGCAGAACGCCTCGCCACACTGGGTGAGCTGATGGCTGGCGTCGCGCATGAAGTACGTAATCCGTTAACGGCTATTCGTGGTTATGTACAGATCTTGCGCCAACAAACCAGTGACCCAATACATCAGGAATATCTGTCCGTAGTACTCAAAGAAATCGATTCAATTAACAAAGTTATTCAGCAATTGCTCGAATTTTCACGTCCACGCCACAGTCAATGGCAACAAGTCAGCCTCAATGCATTGGTTGAAGAAACTCTGGTACTGGTACAAACCGCCGGCGTACAAGCGCGGGTCGACTTCATAAGCGAACTGGATAATGAATTAAGCCCGATTAACGCCGATCGTGAACTGCTCAAACAGGTACTACTGAATATCCTGATCAATGCCGTCCAGGCTATCAGCGCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTGATATTCGCGTCGCCAGTTTGCCGGGCTACGGCGCAACCTTCACGCTTATTTTACCGATCAACCCGCAGGGAAATCAGACTGTATGA", 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], + [ + "gene_synonym", + "ECK2214" + ], + [ + "gene_synonym", + "EcoGene:EG11669" + ], + [ + "gene_synonym", + "GI:16130158" + ], + [ + "gene_synonym", + "GeneID:947525" + ], + [ + "gene_synonym", + "JW2215" + ], + [ + "gene_synonym", + "NP_416725.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76458" + ], + [ + "gene_synonym", + "atoD" + ], + [ + "gene_synonym", + "b2221" + ] + ], + "dna_sequence": 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"protein_translation": "MKTKLMTLQDATGFFRDGMTIMVGGFMGIGTPSRLVEALLESGVRDLTLIANDTAFVDTGIGPLIVNGRVRKVIASHIGTNPETGRRMISGEMDVVLVPQGTLIEQIRCGGAGLGGFLTPTGVGTVVEEGKQTLTLDGKTWLLERPLRADLALIRAHRCDTLGNLTYQLSARNFNPLIALAADITLVEPDELVETGELQPDHIVTPGAVIDHIIVSQESK", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007349" + ], + [ + "gene_synonym", + "ECK2215" + ], + [ + "gene_synonym", + "EcoGene:EG11670" + ], + [ + "gene_synonym", + "GI:16130159" + ], + [ + "gene_synonym", + "GeneID:946719" + ], + [ + "gene_synonym", + "JW2216" + ], + [ + "gene_synonym", + "NP_416726.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76459" + ], + [ + "gene_synonym", + "atoA" + ], + [ + "gene_synonym", + "b2222" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0007362" + ], + [ + "gene_synonym", + "ASAP:ABE-0007364" + ], + [ + "gene_synonym", + "ASAP:ABE-0285101" + ], + [ + "gene_synonym", + "ECK2220" + ], + [ + "gene_synonym", + "EcoGene:EG14081" + ], + [ + "gene_synonym", + "GeneID:1450231" + ], + [ + "gene_synonym", + "JW2221" + ], + [ + "gene_synonym", + "JW2222" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76464" + ], + [ + "gene_synonym", + "b4500" + ], + [ + "gene_synonym", + "yfaR" + ], + [ + "gene_synonym", + "yfaS" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0007370" + ], + [ + "gene_synonym", + "ECK2223" + ], + [ + "gene_synonym", + "EcoGene:EG10423" + ], + [ + "gene_synonym", + "GI:16130166" + ], + [ + "gene_synonym", + "GeneID:946614" + ], + [ + "gene_synonym", + "JW2225" + ], + [ + "gene_synonym", + "NP_416734.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AES4" + ], + [ + "gene_synonym", + "b2231" + ], + [ + "gene_synonym", + "gyrA" + ], + [ + "gene_synonym", + "hisW" + ], + [ + "gene_synonym", + "nalA" + ], + [ + "gene_synonym", + "nfxA" + ], + [ + "gene_synonym", + "norA" + ], + [ + "gene_synonym", + "parD" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "ECK2224" + ], + [ + "gene_synonym", + "EcoGene:EG11143" + ], + [ + "gene_synonym", + "GI:16130167" + ], + [ + "gene_synonym", + "GeneID:946607" + ], + [ + "gene_synonym", + "JW2226" + ], + [ + "gene_synonym", + "NP_416735.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17993" + ], + [ + "gene_synonym", + "b2232" + ], + [ + "gene_synonym", + "pufX" + ], + [ + "gene_synonym", + "ubiG" + ], + [ + "gene_synonym", + "yfaB" + ] + ], + "dna_sequence": 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"ed1a243e8d27869395b7eb2c096078b0", + "parent_gene": "", + "protein_md5": "c85df4f0f034c51fe420ff314ef1d243", + "protein_translation": "MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK", + "protein_translation_length": 240, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007377" + ], + [ + "gene_synonym", + "ECK2225" + ], + [ + "gene_synonym", + "EcoGene:EG12850" + ], + [ + "gene_synonym", + "GI:16130168" + ], + [ + "gene_synonym", + "GeneID:946595" + ], + [ + "gene_synonym", + "JW2227" + ], + [ + "gene_synonym", + "NP_416736.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45508" + ], + [ + "gene_synonym", + "b2233" + ], + [ + "gene_synonym", + "yfaF" + ], + [ + "gene_synonym", + "yfaJ" + ], + [ + "gene_synonym", + "yfaK" + ], + [ + "gene_synonym", + "yfaL" + ] + ], + "dna_sequence": "ATGCGGATTATCTTTCTACGCAAGGAGTATTTATCTTTACTCCCGTCAATGATTGCATCTCTTTTCTCTGCTAACGGTGTCGCGGCGGTCACTGATTCATGCCAGGGATATGATGTCAAAGCGAGTTGTCAGGCCAGCAGGCAAAGCCTTTCAGGCATTACGCAGGACTGGAGTATCGCTGATGGGCAATGGCTGGTTTTTTCGGATATGACCAATAACGCCAGCGGTGGGGCCGTATTTTTGCAACAAGGAGCGGAATTTTCACTATTACCAGAAAATGAAACTGGAATGACTCTGTTTGCCAATAACACCGTTACAGGAGAATATAATAACGGCGGGGCCATATTTGCTAAAGAAAACTCAACGCTGAATCTTACTGATGTTATTTTTTCCGGTAACGTCGCAGGCGGCTATGGTGGCGCAATCTATTCTTCTGGTACTAACGATACTGGTGCCGTCGATTTACGTGTCACTAACGCCATGTTTCGCAATAACATCGCTAATGATGGCAAAGGTGGCGCAATTTATACCATTAATAATGACGTTTATTTAAGTGATGTTATTTTTGATAACAACCAGGCATATACATCAACAAGTTACAGTGATGGCGATGGCGGGGCAATCGATGTTACCGATAATAATAGCGACAGCAAGCATCCTTCAGGTTATACGATAGTAAATAACACTGCCTTTACAAATAACACTGCCGAAGGTTATGGCGGGGCGATATATACCAATAGCGTGACGGCTCCCTATCTTATTGATATTTCTGTTGATGACAGCTACAGCCAGAACGGAGGCGTGTTAGTCGATGAGAACAATAGCGCAGCAGGCTATGGAGATGGTCCTTCCTCTGCGGCGGGTGGCTTTATGTATCTCGGCTTAAGTGAAGTTACCTTTGATATTGCCGACGGAAAAACGCTGGTTATTGGCAATACAGAGAATGACGGAGCTGTTGACTCTATTGCTGGTACCGGGTTAATCACCAAAACAGGTTCCGGCGATCTGGTACTTAATGCAGATAACAATGACTTTACTGGTGAGATGCAGATTGAAAACGGTGAAGTTACCCTGGGCCGCAGCAACTCCCTGATGAATGTCGGCGATACGCATTGCCAGGACGATCCGCAAGACTGCTACGGTCTGACGATAGGGAGTATTGATCAGTATCAGAATCAGGCTGAGCTAAACGTTGGCTCGACCCAACAAACTTTTGTGCACGCATTGACGGGCTTTCAGAATGGCACTTTAAATATCGATGCTGGTGGCAACGTTACTGTTAATCAGGGCAGTTTTGCTGGCATCATCGAAGGTGCTGGTCAGCTCACCATTGCGCAAAACGGCAGCTACGTGCTGGCAGGGGCGCAGTCGATGGCGCTAACCGGCGATATAGTCGTTGATGATGGTGCGGTGCTTTCGCTGGAAGGCGACGCGGCAGATCTTACCGCTCTCCAGGACGATCCGCAGTCGATCGTGTTAAACGGCGGTGTGCTCGATCTCTCTGATTTCTCCACCTGGCAGAGCGGCACATCATACAACGATGGCCTTGAAGTCAGTGGCAGCAGCGGAACGGTTATCGGCAGTCAGGATGTGGTAGATCTTGCAGGTGGCGACAATTTGCATATCGGCGGCGACGGGAAAGATGGCGTCTACGTGGTGGTCGATGCGAGCGACGGGCAGGTAAGTCTGGCAAACAATAATAGTTATTTGGGCACAACACAAATCGCCTCCGGTACGCTGATGGTGAGCGACAACTCGCAGCTTGGAGATACCCACTATAACCGCCAGGTTATCTTTACCGATAAGCAACAAGAAAGCGTGATGGAGATTACCTCCGACGTTGACACGCGTTCAGATGCGGCAGGCCACGGACGTGATATTGAAATGCGCGCCGACGGTGAAGTGGCAGTTGATGCGGGGGTAGACACGCAGTGGGGCGCACTGATGGCTGACAGCAGCGGGCAGCATCAGGATGAGGGTAGCACATTGACTAAAACGGGGGCTGGTACACTGGAGCTGACCGCCAGCGGTACAACGCAGTCGGCGGTACGTGTCGAAGAAGGCACCCTGAAAGGTGATGTTGCTGATATCCTTCCTTATGCTTCGTCACTGTGGGTTGGTGATGGGGCAACGTTCGTTACTGGCGCGGATCAGGATATTCAGTCAATTGATGCTATTTCCAGCGGCACTATCGACATCAGCGATGGTACGGTTTTGCGCCTGACCGGGCAGGATACTTCCGTCGCCCTTAATGCCTCACTATTTAACGGCGATGGGACGCTGGTGAATGCCACCGATGGTGTGACGTTGACAGGTGAGCTTAATACCAACCTTGAAACTGACAGCCTGACTTATCTTTCCAACGTGACGGTTAATGGCAATCTGACCAATACGTCCGGTGCGGTTAGCCTGCAAAATGGCGTCGCTGGCGATACGCTGACGGTAAACGGTGATTATACCGGCGGCGGTACGCTACTGCTCGATAGCGAATTAAACGGCGATGACTCGGTAAGCGATCAATTGGTGATGAACGGTAATACTGCTGGCAACACAACTGTGGTGGTTAACTCCATTACAGGGATTGGTGAGCCGACATCGACAGGCATTAAAGTGGTTGATTTCGCAGCTGATCCCACGCAGTTTCAAAACAATGCGCAGTTCAGTCTGGCAGGCAGCGGCTACGTCAATATGGGAGCGTATGACTACACGCTGGTGGAAGATAACAACGACTGGTATCTGCGATCGCAAGAAGTAACGCCGCCATCGCCACCTGATCCAGACCCGACTCCCGATCCTGATCCCACGCCGGATCCTGATCCAACACCCGACCCGGAACCTACGCCTGCTTACCAGCCGGTGTTGAATGCCAAAGTTGGCGGTTATCTTAATAACCTGCGGGCGGCAAATCAGGCGTTTATGATGGAGCGACGCGATCACGCAGGTGGCGATGGTCAGACGCTGAATTTACGTGTTATCGGCGGAGATTATCATTACACAGCAGCGGGGCAACTGGCTCAACATGAAGACACTTCTACGGTGCAACTTAGCGGCGATCTGTTTAGCGGGCGCTGGGGCACGGATGGCGAGTGGATGCTTGGGATTGTTGGTGGCTACAGCGATAACCAGGGCGACAGCCGCTCGAATATGACCGGAACTCGCGCCGATAACCAGAACCACGGTTATGCCGTTGGGCTGACATCAAGCTGGTTTCAGCACGGTAATCAGAAGCAAGGGGCCTGGCTGGATAGCTGGCTGCAATACGCGTGGTTTAGCAATGATGTTTCCGAACAAGAAGATGGCACAGATCATTACCACTCGTCGGGGATTATCGCCTCGCTGGAGGCGGGGTATCAGTGGTTACCGGGGCGTGGTGTGGTGATTGAACCGCAGGCGCAGGTGATTTATCAGGGCGTGCAGCAGGATGATTTTACCGCCGCTAACCGTGCGCGCGTGTCACAATCGCAGGGTGATGATATTCAGACGCGGCTGGGTTTACACAGCGAATGGCGTACCGCTGTTCATGTCATACCAACATTAGATCTGAATTATTATCACGATCCCCATTCGACGGAAATTGAAGAGGATGGCAGCACTATCAGTGACGATGCGGTGAAGCAACGGGGTGAAATAAAAGTGGGAGTCACGGGCAATATCAGTCAGCGAGTGTCCCTGCGCGGCAGCGTGGCGTGGCAGAAAGGGAGTGATGATTTTGCCCAGACGGCAGGGTTTTTGTCGATGACGGTGAAATGGTAA", 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"MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW", + "protein_translation_length": 1250, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007383" + ], + [ + "gene_synonym", + "ECK2226" + ], + [ + "gene_synonym", + "EcoGene:EG10660" + ], + [ + "gene_synonym", + "GI:16130169" + ], + [ + "gene_synonym", + "GeneID:946612" + ], + [ + "gene_synonym", + "JW2228" + ], + [ + "gene_synonym", + "NP_416737.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00452" + ], + [ + "gene_synonym", + "b2234" + ], + [ + "gene_synonym", + "dnaF" + ], + [ + "gene_synonym", + "nrdA" + ] + ], + "dna_sequence": 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"ATGTTGAGTATTTTTAAACCAGCGCCACACAAAGCGCGCTTACCTGCCGCGGAGATCGATCCGACTTATCGTCGATTGCGCTGGCAAATTTTCCTGGGGATATTCTTTGGCTATGCGGCTTACTATTTGGTTCGTAAGAACTTTGCGCTTGCTATGCCTTATCTGGTTGAGCAGGGATTCTCACGCGGTGATTTAGGTTTTGCCCTTTCGGGGATCTCGATTGCTTATGGATTTTCGAAATTCATCATGGGTTCGGTATCGGATCGCTCGAATCCGCGCGTTTTCCTGCCCGCAGGTTTGATTCTGGCGGCGGCAGTGATGTTGTTTATGGGCTTTGTGCCATGGGCGACGTCGAGCATTGCGGTGATGTTTGTACTGTTGTTCCTCTGCGGTTGGTTCCAGGGGATGGGGTGGCCGCCGTGTGGTCGTACTATGGTGCACTGGTGGTCGCAGAAAGAACGTGGCGGCATTGTGTCAGTGTGGAACTGTGCGCACAACGTCGGTGGTGGTATTCCGCCGCTGCTGTTCCTGCTGGGGATGGCCTGGTTCAATGACTGGCATGCGGCGCTCTATATGCCTGCTTTCTGCGCCATTCTGGTGGCATTATTCGCCTTTGCGATGATGCGCGATACCCCGCAATCCTGTGGCTTGCCGCCGATCGAAGAGTACAAAAATGATTATCCGGACGACTATAACGAAAAAGCGGAACAGGAGCTGACGGCGAAGCAAATCTTCATGCAGTACGTACTGCCGAACAAACTGCTGTGGTATATCGCCATCGCCAACGTGTTCGTTTATCTGCTGCGTTACGGCATCCTCGACTGGTCACCGACTTATCTGAAAGAGGTTAAGCATTTCGCGCTAGATAAATCCTCCTGGGCCTACTTCCTTTATGAATATGCAGGTATTCCGGGCACTCTGCTGTGCGGCTGGATGTCGGATAAAGTCTTCCGTGGCAACCGTGGGGCAACCGGCGTTTTCTTTATGACACTGGTGACCATCGCGACTATCGTTTACTGGATGAACCCGGCAGGTAACCCAACCGTCGATATGATTTGTATGATTGTTATCGGCTTCCTGATCTACGGTCCTGTGATGCTGATCGGTCTGCATGCGCTGGAACTGGCACCGAAAAAAGCGGCAGGTACGGCAGCGGGCTTTACCGGGCTGTTTGGTTACCTGGGCGGTTCGGTGGCGGCGAGCGCGATTGTTGGCTACACCGTGGACTTCTTCGGCTGGGATGGCGGCTTTATGGTAATGATTGGCGGCAGCATTCTGGCGGTTATCTTGTTGATTGTTGTGATGATTGGCGAAAAACGTCGCCATGAACAATTACTGCAAGAACGCAACGGAGGCTAA", 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"gene_synonym", + "GI:16130176" + ], + [ + "gene_synonym", + "GeneID:946713" + ], + [ + "gene_synonym", + "JW2235" + ], + [ + "gene_synonym", + "NP_416744.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9C0" + ], + [ + "gene_synonym", + "b2241" + ], + [ + "gene_synonym", + "glpA" + ] + ], + "dna_sequence": 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aldolase" + ], + "id": "CDS_2229", + "location": [ + [ + "NC_000913", + 2358845, + "-", + 804 + ] + ], + "md5": "77c73d1f444f00d902bd6d46db281b03", + "parent_gene": "", + "protein_md5": "e91610c3c11c3cb4105ed928db5f1743", + "protein_translation": "MNALLSNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY", + "protein_translation_length": 267, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007433" + ], + [ + "gene_synonym", + "ECK2239" + ], + [ + "gene_synonym", + "EcoGene:EG14084" + ], + [ + "gene_synonym", + "GI:90111406" + ], + [ + "gene_synonym", + "GeneID:945796" + ], + [ + "gene_synonym", + "JW2240" + ], + [ + "gene_synonym", + "NP_416749.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76470" + ], + [ + "gene_synonym", + "b2246" + ], + [ + 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"GI:16130205" + ], + [ + "gene_synonym", + "GeneID:946743" + ], + [ + "gene_synonym", + "JW2265" + ], + [ + "gene_synonym", + "NP_416773.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76481" + ], + [ + "gene_synonym", + "b2270" + ], + [ + "gene_synonym", + "yfbK" + ] + ], + "dna_sequence": 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"ATGAAAAAAATAATCTTTGCTTTTATTATATTATTTGTGTTTTTACTCCCTATGATTATTTTTTACCAACCCTGGGTCAATGCATTACCGTCAACGCCCCGACACGCAAGTCCTGAGCAATTAGAAAAAACAGTTCGTTATCTTACACAAACTGTGCATCCACGTAGTGCCGACAATATTGATAATCTGAATAGGTCCGCAGAATATATAAAAGAGGTCTTTGTCAGTAGCGGTGCCAGAGTTACCTCGCAGGACGTCCCCATTACGGGTGGCCCCTACAAAAACATTGTTGCTGATTATGGTCCTGCCGATGGACCGCTGATTATTATTGGTGCGCATTATGACTCTGCCAGCAGTTATGAAAACGATCAATTGACCTATACGCCGGGCGCGGATGATAACGCCAGCGGTGTGGCAGGATTACTCGAACTGGCACGTTTGTTACATCAGCAAGTACCGAAAACAGGCGTGCAGCTGGTCGCCTATGCGTCGGAAGAACCGCCCTTCTTTCGTAGCGATGAAATGGGGAGCGCGGTGCATGCAGCTTCGCTTGAGCGTCCAGTGAAATTAATGATAGCACTGGAGATGATTGGCTATTACGACTCTGCGCCTGGAAGCCAGAATTACCCTTACCCGGCAATGTCCTGGCTTTATCCCGATCGGGGAGACTTTATTGCCGTGGTCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGGTTTATTCCCGGTATTGATTTCTCTGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATGGTGTTATAACTTTGTTATACAACAGTAAATAA", + "dna_sequence_length": 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"ATGGAATGGTTAAGTGAAATTCGTAAACTTCGGAAGAACGTACCTGTCGGTATCCAGGTTGCCAGACGTTTGTTAGAGAGGACTGGCGGTGATGTTGATGAAGCCATCAAGTTGTTTCATATTGACCAAATCAATATATTGACGGCAAAAGCAGACGTCACTCATCAGGAAGCAGAGAATGTTTTGTTGGCTACAAACTATGATATTGCAGAAGCTCTTCGGCGTATTGATGAACAACGCTATACACTGACGGAATTGATTTTGCGTAAAAATAAGGATGCCGGAGATGCCTTAAACAATATAGCATTGGCGATTGAATATGAGTGGGATCTCAAGCGTAAGTTTTGGTTTGGTTTTGCAGATATCCAATTATTACCGCCAGTTTTACAAACATTTATGCTGGTTTATGAATGGCATGAATATGTTGGTTGGGAAGGAATGGAGTGTGGGATATTTTTTGAAAGTGATCATACTCACCAGCAATTGCAAGCTTTGGGGTTATTAGAACTCGCCCAAAAAATGGTTACTGCAAGAATCCGATATGATGAGCTAAAAGACAAGGCCGAAAATTTTCACGAGATTACAGAGGATGACATATTCAAAATGCTTATAATACATTGTGACCAACTTGCAAGAGAGGTTGATTCTATATTACTGCAATTTGTGAAGGACAATATTGATGTTTTCCCGTGTCGCCATAACAGACACGAGTTATAA", + "dna_sequence_length": 717, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2258", + "location": [ + [ + "NC_000913", + 2388426, + "-", + 717 + ] + ], + "md5": "1820b4e2640d985df2d105bd78534c29", + "parent_gene": "", + "protein_md5": 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"ATGACACCTTTAGAACGCATTACCCAACTTGTTAATATCAATGGTGATGTTAATAATCCTGATACTCCTCGTCCATTGTTATCTCTTGAGGATTTTTTTATTGACAATAATATCCATGGTTCAATATGTTGCAATGTGATTCCAGAACAATCTCCGCAAGCTATCTATCACCATTTTCTGAAAATACGTGAGCGTAACAATGTTAGTGATGTTTTGGTAGAAATTACGATGTTCGATGACCCAGACTGGCCCTTTAGTGAAAGTATTTTAGTTATCACCACTGCTTCACCAGAAGAAGTTCAGAGCTGGTTTGTAGAAGAAATTGCCCCTGATGAGTGCTGGGAAGGATGGTCAGAAGATACGGAGCATGGATGGGTTGAAGTCCCTGTGGGTATGCATCCGGTTACTTGTTGGTGGGATTAA", + "dna_sequence_length": 423, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2259", + "location": [ + [ + "NC_000913", + 2388635, + "+", + 423 + ] + ], + "md5": "7305378500150d0b3f58c95afed5f546", + "parent_gene": "", + "protein_md5": "594613c09ca4c1ea1e5657fe80067111", + "protein_translation": "MTPLERITQLVNINGDVNNPDTPRPLLSLEDFFIDNNIHGSICCNVIPEQSPQAIYHHFLKIRERNNVSDVLVEITMFDDPDWPFSESILVITTASPEEVQSWFVEEIAPDECWEGWSEDTEHGWVEVPVGMHPVTCWWD", + "protein_translation_length": 140, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007524" + ], + [ + "gene_synonym", + "ECK2269" + ], + [ + "gene_synonym", + "EcoGene:EG14100" + ], + [ + "gene_synonym", + "GI:345452721" + ], + [ + "gene_synonym", + "GeneID:946754" + ], + [ + "gene_synonym", + "JW2270" + ], + [ + "gene_synonym", + "NP_416778.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76486" + ], + [ + "gene_synonym", + "b2275" + ], + [ + "gene_synonym", + "yfbP" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0007545" + ], + [ + "gene_synonym", + "ECK2278" + ], + [ + "gene_synonym", + "EcoGene:EG11774" + ], + [ + "gene_synonym", + "GI:16130219" + ], + [ + "gene_synonym", + "GeneID:946753" + ], + [ + "gene_synonym", + "JW2279" + ], + [ + "gene_synonym", + "NP_416787.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31979" + ], + [ + "gene_synonym", + "b2284" + ], + [ + "gene_synonym", + "nuoB" + ], + [ + "gene_synonym", + "nuoF" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16130220" + ], + [ + "gene_synonym", + "GeneID:946746" + ], + [ + "gene_synonym", + "JW2280" + ], + [ + "gene_synonym", + "NP_416788.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFD1" + ], + [ + "gene_synonym", + "b2285" + ], + [ + "gene_synonym", + "nuoE" + ] + ], + "dna_sequence": "ATGCACGAGAATCAACAACCACAAACCGAGGCTTTTGAGCTGAGTGCGGCAGAGCGTGAAGCGATCGAGCACGAGATGCACCACTACGAAGACCCGCGTGCGGCGTCCATTGAAGCGCTGAAAATCGTTCAGAAGCAGCGTGGCTGGGTGCCGGATGGTGCGATCCACGCGATCGCCGATGTGCTGGGTATTCCGGCAAGCGACGTCGAAGGTGTGGCAACGTTCTACAGTCAGATCTTCCGCCAGCCGGTTGGTCGCCATGTGATCCGTTATTGTGACAGCGTGGTCTGTCATATCAACGGTTATCAGGGTATTCAGGCGGCGCTCGAGAAAAAGCTGAACATCAAACCAGGGCAAACGACATTTGATGGCCGCTTTACGCTGCTGCCAACTTGCTGCCTGGGGAACTGTGATAAAGGGCCAAACATGATGATCGATGAGGACACTCACGCGCATCTGACCCCGGAAGCGATCCCTGAACTGCTGGAGCGGTATAAATGA", + "dna_sequence_length": 501, + "functions": [ + "NADH:ubiquinone oxidoreductase, chain E" + ], + "id": "CDS_2270", + "location": [ + [ + "NC_000913", + 2402052, + "-", + 501 + ] 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"5'-nucleotidase" + ], + "id": "CDS_2276", + "location": [ + [ + "NC_000913", + 2408862, + "+", + 600 + ] + ], + "md5": "08d18fb0422eaa7cf4bda0aee467e787", + "parent_gene": "", + "protein_md5": "c76d5062861d24b3c113f7ddbf8a0690", + "protein_translation": "MKQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQEMDYFMEIFVPSFHLSLDEISQDSPL", + "protein_translation_length": 199, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007565" + ], + [ + "gene_synonym", + "ECK2286" + ], + [ + "gene_synonym", + "EcoGene:EG14103" + ], + [ + "gene_synonym", + "GI:16130227" + ], + [ + "gene_synonym", + "GeneID:946766" + ], + [ + "gene_synonym", + "JW2289" + ], + [ + "gene_synonym", + "NP_416795.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFU2" + ], + [ + "gene_synonym", + "b2292" + ], + [ + "gene_synonym", + "yfbS" + ] + ], + "dna_sequence": "GTGAACGGTGAATTGATTTGGGTTCTTTCATTACTGGCCGTTGCCATCGTCTTGTTTGCGACGGGCAGAGTGCGTATGGATGCGGTCGCTTTGTTTGTTATTGTCGCGTTTGCATTAAGCGGAACGCTGACAGTCCCAGAAGTATTTTCCGGCTTTTCTGATCCTAACGTTGTCCTGATTGCCGCCTTGTTTATTATTGGCGATGGTTTGGTCCGTACCGGTGTTGCCACCGTAATGGGAACATGGCTGGTCAAAGTTGCGGGCAATAGTGAAATCAAAATGTTGGTTTTGTTGATGCTGACCGTCGCGGGGCTTGGCGCGTTTATGAGTTCAACCGGCGTTGTCGCTATCTTTATTCCCGTGGTGTTAAGCGTTGCCATGCGTATGCAAACGTCGCCGTCACGTCTGATGATGCCGTTAAGTTTTGCCGGGCTGATTAGCGGCATGATGACGCTGGTGGCGACGCCGCCGAACCTGGTAGTCAACAGTGAATTGCTGCGTGAAGGCTATCACGGCTTCAGTTTCTTTAGCGTAACACCTATTGGCCTGGTCGTGCTGGTGCTGGGTATTTTGTATATGTTAGTGATGCGTTTCATGCTGAAAGGGGATACCCAGACCCCGCAGCGCGAAGGCTGGACGCGTCGAACCTTTCGCGATCTTATCCGTGAATATCGACTGACCGGGCGTGCGCGACGTCTGGCTATTCGCCCCGGATCGCCAATGATTGGTCAACGGCTGGATGATCTCAAATTACGTGAGCGTTATGGCGCTAACGTCATCGGTGTTGAACGCTGGCGGCGTTTTCGTCGCGTTATCGTGAACGTTAATGGGGTTTCTGAATTTCGCGCGCGTGACGTTTTGCTTATTGATATGTCTGCGGCTGATGTCGATCTCCGGCAATTTTGTAGTGAGCAATTGCTGGAGCCGATGGTACTGCGCGGCGAGTATTTTTCTGACCAGGCCCTTGATGTGGGCATGGCAGAGATTTCATTAATTCCTGAGTCAGAACTGATTGGTAAATCGGTGCGCGAAATTGGTTTTCGTACCCGCTACGGACTGAATGTGGTGGGGCTAAAGCGCAATGGCGTGGCGCTGGAAGGTTCGCTGGCGGATGAGCCTCTGCTGCTGGGCGATATCATCCTGGTTGTGGGTAACTGGAAACTGATCGGTATGCTGGCCAAACAGGGCCGCGACTTCGTAGCGCTGAACTTACCGGAAGAGGTGAGTGAAGCATCACCCGCGCACAGCCAGGCACCCCATGCCATTTTCTGTCTGGTGCTAATGGTGGCGTTAATGCTGACAGATGAAATTCCTAATCCTGTTGCCGCTATCATCGCCTGCCTGCTGATGGGGAAATTCCGCTGTATAGATGCTGAAAGCGCCTATAAATCCATTCACTGGCCGAGCATTATTTTGATCGTTGGGATGATGCCGTTTGCTGTGGCATTACAGAAAACGGGAGGTGTCGCGCTGGCGGTGAAAGGGCTGATGGACATTGGCGGTGGTTACGGGCCACATATGATGCTGGGGTGTTTGTTTGTCTTGTCGGCGGTTATTGGGCTATTTATCTCTAATACCGCGACGGCGGTGTTGATGGCTCCGATTGCGCTGGCTGCTGCCAAAACGATGGGGGTGTCGCCTTATCCATTCGCGATGGTCGTGGCGATGGCAGCATCCGCCGCCTTTATGACACCGGTTTCTTCACCTGTTAACACACTGGTTTTAGGTCCGGGAAATTACAGCTTCAGTGACTTTGTGAAGTTGGGGGTACCGTTCACCATTATCGTGATGGCGGTTTGTGTGGTGATGATCCCGATGCTGTTTCCGTTTTGA", 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"JW5841" + ], + [ + "gene_synonym", + "NP_416833.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39199" + ], + [ + "gene_synonym", + "b2330" + ], + [ + "gene_synonym", + "prmB" + ], + [ + "gene_synonym", + "yfcB" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P08555" + ], + [ + "gene_synonym", + "b2365" + ], + [ + "gene_synonym", + "dsdC" + ], + [ + "gene_synonym", + "dsdX" + ], + [ + "gene_synonym", + "yfdA" + ], + [ + "gene_synonym", + "yfdD" + ] + ], + "dna_sequence": 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"GI:16130298" + ], + [ + "gene_synonym", + "GeneID:946837" + ], + [ + "gene_synonym", + "JW2363" + ], + [ + "gene_synonym", + "NP_416867.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00926" + ], + [ + "gene_synonym", + "b2366" + ], + [ + "gene_synonym", + "dsdA" + ] + ], + "dna_sequence": 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"GI:16130299" + ], + [ + "gene_synonym", + "GeneID:946835" + ], + [ + "gene_synonym", + "JW2364" + ], + [ + "gene_synonym", + "NP_416868.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52600" + ], + [ + "gene_synonym", + "b2367" + ], + [ + "gene_synonym", + "emrY" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "EcoGene:EG13282" + ], + [ + "gene_synonym", + "GI:16130300" + ], + [ + "gene_synonym", + "GeneID:946840" + ], + [ + "gene_synonym", + "JW2365" + ], + [ + "gene_synonym", + "NP_416869.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52599" + ], + [ + "gene_synonym", + "b2368" + ], + [ + "gene_synonym", + "emrK" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:946841" + ], + [ + "gene_synonym", + "JW2366" + ], + [ + "gene_synonym", + "NP_416870.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACZ4" + ], + [ + "gene_synonym", + "b2369" + ], + [ + "gene_synonym", + "evgA" + ] + ], + "dna_sequence": "ATGAACGCAATAATTATTGATGACCATCCTCTTGCTATCGCAGCAATTCGTAATTTATTGATCAAAAACGATATTGAAATCTTAGCAGAGTTGACTGAAGGCGGAAGTGCCGTTCAGCGGGTGGAAACACTTAAGCCTGATATCGTCATCATTGATGTCGATATCCCCGGAGTTAACGGTATCCAGGTGTTAGAAACGCTGAGGAAGCGCCAATATAGCGGAATTATTATTATCGTCTCCGCTAAAAATGACCATTTTTACGGGAAACATTGTGCTGATGCTGGCGCTAATGGTTTCGTGAGTAAAAAAGAAGGCATGAACAATATCATTGCGGCTATTGAAGCTGCAAAAAATGGCTACTGCTATTTCCCCTTCTCTCTCAACCGGTTTGTTGGAAGTTTAACGTCCGACCAGCAAAAACTCGACTCCTTATCGAAACAAGAAATTAGTGTCATGCGGTATATTCTTGATGGCAAGGATAATAATGACATTGCTGAAAAAATGTTCATCAGCAACAAAACTGTCAGCACTTATAAAAGTCGCCTGATGGAAAAATTAGAATGTAAATCACTGATGGATCTTTACACATTCGCACAACGTAACAAAATCGGCTAA", + "dna_sequence_length": 615, + "functions": [ + "response regulator in two-component regulatory system with EvgS" + ], + "id": "CDS_2354", + "location": [ + [ + "NC_000913", + 2483755, + "+", + 615 + ] + ], + "md5": "2335d9ecbe4de6ae1c0184b82d9db67b", + "parent_gene": "", + "protein_md5": "0fc39431cf45f67ef9e76c9a1f225d7f", + "protein_translation": "MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKDNNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQRNKIG", + "protein_translation_length": 204, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007819" + ], + [ + "gene_synonym", + "ECK2366" + ], + [ + "gene_synonym", + "EcoGene:EG11610" + ], + [ + "gene_synonym", + "GI:16130302" + ], + [ + "gene_synonym", + "GeneID:946844" + ], + [ + "gene_synonym", + "JW2367" + ], + [ + "gene_synonym", + "NP_416871.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30855" + ], + [ + "gene_synonym", + "b2370" + ], + [ + "gene_synonym", + "evgS" + ] + ], + "dna_sequence": "ATGAAGTTTTTACCCTATATTTTTCTTCTCTGTTGTGGTCTTTGGTCGACCATAAGTTTCGCAGACGAAGATTACATCGAATATCGTGGCATCAGTAGTAACAACCGTGTCACACTTGATCCACTACGTCTGAGCAACAAGGAATTACGTTGGTTAGCGAGCAAAAAAAATCTTGTGATTGCAGTACATAAGTCCCAAACGGCTACGTTGTTGCATACCGATTCGCAGCAACGGGTTCGTGGTATTAATGCTGATTATTTAAATCTTTTAAAAAGAGCGTTAAATATCAAATTAACACTCCGGGAATACGCAGATCATCAAAAAGCAATGGACGCGCTTGCAGAAGGTGAAGTCGATATAGTGTTATCACATTTAGTTACTTCGCCGCCTCTTAATAATGACATTGCTGCAACCAAACCATTGATAATTACCTTTCCGGCGCTGGTAACCACCCTTCACGACTCAATGCGACCGCTTACCTCACCAAAACCAGTAAATATTGCTCGGGTAGCAAATTACCCCCCAGACGAGGTAATTCATCAATCATTTCCAAAAGCAACAATTATCTCTTTTACAAATTTATATCAGGCATTAGCATCCGTCTCAGCTGGGCACAATGATTACTTTATTGGTAGTAACATCATTACCAGCAGTATGATTTCCCGCTATTTCACTCACTCCTTAAATGTAGTGAAATATTATAACTCGCCGCGTCAATATAATTTTTTCTTGACCAGAAAAGAATCTGTCATTCTTAATGAAGTACTCAATAGATTTGTTGATGCTTTAACAAATGAAGTTCGCTATGAAGTATCACAAAATTGGCTTGATACAGGAAACCTGGCCTTTCTGAACAAACCATTAGAACTCACTGAACATGAAAAACAGTGGATTAAGCAGCATCCCAATTTAAAGGTGCTGGAAAATCCTTACTCGCCCCCCTATTCTATGACGGATGAAAATGGCTCGGTTCGGGGCGTTATGGGGGACATTCTTAATATTATTACCTTGCAAACAGGTTTAAATTTTTCTCCGATCACCGTTTCACACAATATCCATGCTGGAACACAGCTTAGCCCCGGAGGATGGGATATAATACCTGGCGCTATTTATAGTGAAGATCGAGAAAATAATGTTTTATTTGCTGAAGCCTTCATAACAACGCCTTACGTTTTTGTCATGCAAAAAGCGCCTGACAGTGAACAAACATTAAAAAAAGGAATGAAAGTTGCCATTCCATATTATTATGAGCTGCATTCGCAATTAAAAGAGATGTATCCGGAGGTTGAATGGATACAGGTCGATAATGCCAGCGCTGCATTTCACAAGGTTAAGGAAGGTGAACTTGATGCTCTGGTCGCGACACAGCTAAATTCGCGTTACATGATCGATCATTACTATCCTAATGAACTTTATCATTTTCTTATTCCTGGCGTTCCGAATGCATCGCTTTCGTTCGCTTTTCCTCGCGGAGAACCGGAACTTAAGGATATTATTAATAAAGCACTGAATGCAATTCCCCCAAGCGAAGTTCTGCGCCTGACGGAAAAATGGATTAAAATGCCCAATGTGACCATTGACACATGGGACCTATATAGCGAGCAATTTTATATTGTTACGACATTATCCGTTTTATTAGTTGGCAGTAGCCTTTTATGGGGATTCTACCTGTTACGCTCAGTTCGTCGTCGTAAAGTCATTCAGGGTGATTTAGAAAACCAAATATCATTCCGAAAAGCACTCTCGGATTCCTTACCGAATCCAACTTATGTTGTAAACTGGCAAGGTAATGTCATTAGTCATAATAGTGCTTTTGAACATTATTTCACTGCGGATTACTACAAAAATGCAATGTTACCATTAGAAAACAGTGACTCACCCTTTAAAGATGTTTTTTCTAATGCGCATGAAGTCACAGCAGAAACGAAAGAAAATCGAACAATATACACACAGGTATTTGAAATTGATAATGGCATCGAGAAAAGATGCATTAATCACTGGCATACATTATGCAATCTTCCTGCAAGTGACAATGCAGTATATATTTGTGGTTGGCAAGATATTACTGAAACGCGTGATCTAATTAATGCACTCGAGGTAGAAAAAAATAAAGCGATAAAGGCTACCGTAGCAAAAAGTCAGTTTCTGGCAACGATGAGTCACGAAATAAGAACACCAATAAGCTCTATTATGGGCTTCCTGGAACTTCTGTCGGGTTCTGGTCTTAGCAAGGAGCAACGGGTGGAGGCGATTTCACTTGCCTACGCCACCGGACAATCACTCCTCGGCTTAATTGGTGAAATCCTTGATGTCGACAAAATTGAATCGGGTAACTATCAACTTCAACCACAATGGGTCGATATCCCTACTTTAGTCCAGAACACTTGTCACTCTTTCGGTGCGATTGCTGCAAGCAAATCGATCGCATTAAGTTGCAGCAGTACGTTTCCTGAACATTACCTGGTTAAGATCGACCCTCAGGCGTTTAAGCAGGTCTTATCAAATTTACTGAGTAATGCTCTCAAATTTACCACCGAGGGGGCAGTAAAAATTACGACCTCCCTGGGTCACATTGATGACAACCACGCTGTTATCAAAATGACGATTATGGATTCTGGAAGTGGATTATCGCAGGAAGAACAACAACAACTGTTTAAACGCTACAGCCAAACAAGTGCAGGTCGTCAGCAAACAGGTTCTGGTTTAGGCTTAATGATCTGCAAAGAATTAATTAAAAATATGCAGGGCGATTTGTCATTAGAAAGTCATCCAGGCATAGGAACAACATTTACGATCACAATCCCGGTAGAAATTAGCCAGCAAGTGGCGACTGTCGAGGCAAAAGCAGAACAACCCATCACACTACCTGAAAAGTTGAGCATATTAATCGCGGATGATCATCCGACCAACAGGCTATTACTCAAACGCCAGCTAAATCTATTAGGATATGATGTTGATGAAGCCACTGATGGTGTGCAAGCGCTACACAAAGTCAGTATGCAACATTATGATCTGCTTATTACTGACGTTAATATGCCGAATATGGATGGTTTTGAGTTGACTCGCAAACTCCGTGAGCAAAATTCTTCCTTACCCATCTGGGGGCTTACAGCCAACGCACAGGCTAACGAACGTGAAAAAGGGTTAAGTTGCGGCATGAACTTATGTTTGTTCAAACCGTTGACCCTGGATGTACTGAAAACACATTTAAGTCAGTTACACCAAGTTGCGCATATTGCACCTCAGTATCGCCACCTTGATATCGAAGCCCTGAAAAATAATACGGCGAACGATCTACAACTGATGCAGGAGATTCTCATGACTTTCCAGCATGAAACGCATAAAGATCTACCCGCTGCGTTTCAAGCACTAGAAGCTGGCGATAACAGAACTTTCCATCAGTGTATTCATCGCATCCACGGTGCGGCTAACATCCTGAATTTGCAAAAGTTGATTAATATTAGCCATCAGTTAGAAATAACACCTGTTTCAGATGACAGTAAGCCTGAAATTCTTCAGTTGCTGAACTCTGTAAAAGAACACATTGCAGAGCTGGACCAGGAGATTGCTGTTTTCTGTCAGAAAAATGACTAA", 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"MKFLPYIFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDPLRLSNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLREYADHQKAMDALAEGEVDIVLSHLVTSPPLNNDIAATKPLIITFPALVTTLHDSMRPLTSPKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGHNDYFIGSNIITSSMISRYFTHSLNVVKYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNWLDTGNLAFLNKPLELTEHEKQWIKQHPNLKVLENPYSPPYSMTDENGSVRGVMGDILNIITLQTGLNFSPITVSHNIHAGTQLSPGGWDIIPGAIYSEDRENNVLFAEAFITTPYVFVMQKAPDSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIQVDNASAAFHKVKEGELDALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPPSEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKVIQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENSDSPFKDVFSNAHEVTAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDNAVYICGWQDITETRDLINALEVEKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSGSGLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIAASKSIALSCSSTFPEHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLGHIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAEQPITLPEKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSSLPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDIEALKNNTANDLQLMQEILMTFQHETHKDLPAAFQALEAGDNRTFHQCIHRIHGAANILNLQKLINISHQLEITPVSDDSKPEILQLLNSVKEHIAELDQEIAVFCQKND", + "protein_translation_length": 1197, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007821" + ], + [ + "gene_synonym", + "ECK2367" + ], + [ + "gene_synonym", + "EcoGene:EG13284" + ], + [ + "gene_synonym", + "GI:162135906" + ], + [ + "gene_synonym", + "GeneID:946432" + ], + [ + "gene_synonym", + "JW2368" + ], + [ + "gene_synonym", + "NP_416872.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76518" + ], + [ + "gene_synonym", + "b2371" + ], + [ + "gene_synonym", + "yfdE" + ] + ], + "dna_sequence": "ATGACAAATAATGAAAGCAAAGGGCCGTTTGAAGGCTTATTAGTTATCGATATGACACATGTCCTTAATGGACCTTTCGGAACTCAACTTCTTTGTAATATGGGCGCAAGGGTAATTAAAGTTGAGCCGCCGGGTCATGGTGATGATACCCGCACATTTGGTCCCTATGTGGATGGACAGTCACTCTATTACAGTTTTATTAATCATGGCAAAGAGAGTGTGGTTCTTGATTTAAAGAATGATCACGATAAAAGTATATTTATAAATATGCTCAAACAAGCTGATGTATTAGCTGAGAATTTTCGCCCAGGTACAATGGAAAAACTGGGGTTTTCATGGGAAACGCTTCAAGAAATCAACCCGCGCCTCATATATGCTTCATCGTCAGGTTTCGGACATACCGGTCCGCTAAAAGATGCTCCTGCCTACGATACCATCATTCAGGCAATGAGCGGGATAATGATGGAAACAGGATATCCTGATGCTCCGCCAGTGCGCGTTGGTACATCTCTTGCGGATCTATGCGGCGGTGTCTATTTATTCAGCGGAATAGTGAGTGCACTTTATGGCCGCGAAAAGAGCCAGAGAGGGGCGCATGTCGATATAGCGATGTTTGATGCCACGCTGAGTTTTCTGGAGCATGGTCTGATGGCATATATCGCAACTGGGAAGTCACCACAACGTCTGGGAAATCGCCATCCCTACATGGCACCTTTTGATGTTTTCAATACTCAGGATAAGCCGATTACGATTTGTTGTGGTAATGACAAGCTTTTTTCTGCGTTATGCCAGGCACTGGAGCTTACGGAACTGGTTAATGATCCCCGATTTAGCAGCAATATTTTACGCGTACAAAACCAGGCTATTCTTAAACAATATATTGAGCGGACGTTAAAAACGCAGGCAGCTGAAGTTTGGTTAGCCAGAATACATGAAGTTGGTGTACCCGTCGCGCCGTTATTAAGTGTGGCTGAGGCCATTAAATTGCCACAAACTCAGGCGAGAAATATGTTGATTGAAGCCGGGGGAATAATGATGCCGGGTAATCCGATAAAAATCAGCGGCTGCGCGGACCCGCATGTTATGCCGGGAGCGGCAACGCTCGACCAGCATGGGGAACAAATTCGCCAGGAGTTCTCATCATAA", + "dna_sequence_length": 1146, + "functions": [ + "acetyl-CoA:oxalate CoA-transferase" + ], + "id": "CDS_2356", + "location": [ + [ + "NC_000913", + 2489168, + "-", + 1146 + ] + ], + "md5": "a57b387fe76f55abd350c2f1cc3aa4b6", + "parent_gene": "", + "protein_md5": "8155697a9afcb04958b3261f25646398", + "protein_translation": "MTNNESKGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYPDAPPVRVGTSLADLCGGVYLFSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMAYIATGKSPQRLGNRHPYMAPFDVFNTQDKPITICCGNDKLFSALCQALELTELVNDPRFSSNILRVQNQAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQARNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEFSS", + "protein_translation_length": 381, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007824" + ], + [ + "gene_synonym", + "ECK2368" + ], + [ + "gene_synonym", + "EcoGene:EG14144" + ], + [ + "gene_synonym", + "GI:16130304" + ], + [ + "gene_synonym", + "GeneID:949110" + ], + [ + "gene_synonym", + "JW2369" + ], + [ + "gene_synonym", + "NP_416873.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA49" + ], + [ + "gene_synonym", + "b2372" + ], + [ + "gene_synonym", + "yfdV" + ] + ], + "dna_sequence": "ATGCTAACATTTTTTATTGGCGATTTATTGCCTATTATCGTAATCATGCTGTTGGGTTATTTTAGCGGCAGACGAGAAACATTTTCAGAAGATCAAGCTCGGGCATTTAATAAACTGGTATTAAACTACGCGCTTCCTGCGGCTCTATTTGTATCTATTACTCGGGCAAACAGGGAAATGATTTTTGCGGACACTCGTCTGACCCTTGTATCACTTGTGGTTATTGTCGGATGTTTCTTTTTCTCCTGGTTCGGTTGCTACAAATTTTTTAAACGTACCCATGCAGAAGCAGCTGTATGTGCATTAATTGCAGGTTCACCTACCATTGGATTCCTGGGGTTTGCAGTTCTCGATCCTATTTATGGTGATTCCGTATCAACAGGTTTAGTGGTAGCAATTATTTCTATTATTGTTAACGCAATTACTATTCCTATTGGTCTGTATTTGCTGAATCCTTCTTCAGGAGCGGATGGTAAGAAGAATAGTAATCTGAGCGCATTAATTTCTGCGGCAAAGGAGCCAGTAGTATGGGCACCTGTTCTGGCAACGATCCTGGTGTTGGTTGGGGTAAAAATTCCGGCAGCATGGGACCCAACCTTTAATCTGATTGCGAAGGCTAACTCAGGGGTAGCGGTATTCGCTGCGGGGTTGACTCTGGCTGCACATAAATTCGAGTTCAGTGCCGAAATTGCTTATAACACCTTCCTGAAGCTGATTCTGATGCCACTGGCACTGCTTCTCGTTGGTATGGCATGTCATTTGAACAGCGAACATCTGCAGATGATGGTACTGGCAGGCGCATTACCGCCGGCATTCTCCGGAATCATTATTGCCAGCCGGTTTAATGTCTACACCCGTACTGGTACAGCGTCATTGGCTGTGAGCGTACTGGGCTTTGTCGTCACGGCTCCCTTGTGGATTTATGTCAGTCGACTGGTTTCATAA", + "dna_sequence_length": 945, + "functions": [ + "putative transporter" + ], + "id": "CDS_2357", + "location": [ + [ + "NC_000913", + 2490186, + "-", + 945 + ] + ], + "md5": "403b703baa3671936b64f06eb546d880", + "parent_gene": "", + "protein_md5": "7e0148b9955b55d6cbdc9ebbfda702b9", + "protein_translation": "MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYALPAALFVSITRANREMIFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCALIAGSPTIGFLGFAVLDPIYGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKKNSNLSALISAAKEPVVWAPVLATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLTLAAHKFEFSAEIAYNTFLKLILMPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGIIIASRFNVYTRTGTASLAVSVLGFVVTAPLWIYVSRLVS", + "protein_translation_length": 314, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007826" + ], + [ + "gene_synonym", + "ECK2369" + ], + [ + "gene_synonym", + "EcoGene:EG14143" + ], + [ + "gene_synonym", + "GI:16130305" + ], + [ + "gene_synonym", + "GeneID:946845" + ], + [ + "gene_synonym", + "JW2370" + ], + [ + "gene_synonym", + "NP_416874.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFI0" + ], + [ + "gene_synonym", + "b2373" + ], + [ + "gene_synonym", + "oxc" + ], + [ + "gene_synonym", + "yfdU" + ] + ], + "dna_sequence": "ATGTCAGATCAACTTCAAATGACAGATGGTATGCATATCATCGTTGAAGCATTAAAACAGAATAATATTGACACTATTTATGGTGTTGTAGGTATTCCTGTGACGGATATGGCACGCCATGCCCAGGCGGAAGGCATTCGTTATATTGGTTTTCGTCATGAGCAGTCGGCAGGCTATGCCGCTGCGGCAAGCGGTTTTCTTACCCAAAAACCGGGGATCTGCCTGACAGTTTCTGCGCCAGGATTCCTCAATGGTTTGACCGCATTGGCCAACGCAACGGTAAATGGTTTTCCGATGATCATGATTAGCGGCTCCAGCGACCGCGCGATCGTCGACCTACAGCAAGGTGATTATGAAGAGCTGGACCAAATGAATGCGGCAAAACCGTATGCCAAAGCAGCATTTCGCGTTAATCAGCCGCAGGATCTTGGCATTGCATTGGCACGCGCTATCCGGGTCTCTGTATCGGGTCGCCCTGGCGGAGTTTATCTTGATTTGCCAGCAAATGTCCTGGCCGCGACGATGGAAAAAGACGAAGCGTTAACCACGATTGTTAAAGTTGAAAATCCGTCGCCAGCATTATTGCCATGCCCGAAGTCAGTCACTAGCGCAATTTCGCTTTTAGCAAAAGCTGAACGGCCATTAATTATCCTTGGCAAAGGCGCGGCGTATTCACAAGCTGATGAACAGCTTCGTGAATTTATTGAAAGTGCTCAGATTCCATTCCTGCCAATGTCTATGGCGAAAGGGATCCTTGAAGATACGCATCCACTTTCTGCGGCAGCTGCGCGTTCGTTTGCCCTGGCAAATGCTGACGTTGTCATGCTTGTTGGTGCACGACTGAATTGGTTATTGGCACACGGTAAAAAAGGATGGGCGGCAGATACACAGTTTATTCAACTGGATATTGAACCGCAGGAAATTGACAGCAACCGCCCCATTGCTGTGCCAGTCGTTGGTGATATTGCATCCAGTATGCAAGGTATGCTGGCAGAACTGAAACAAAACACATTTACGACTCCACTGGTATGGCGCGATATTTTAAATATCCACAAGCAGCAAAATGCACAAAAAATGCATGAAAAATTAAGTACAGATACTCAACCATTAAATTACTTTAATGCATTAAGTGCTGTGCGCGACGTATTGCGCGAGAACCAGGATATTTATTTAGTTAATGAAGGTGCAAATACCCTGGATAATGCACGAAATATTATTGATATGTATAAACCACGTCGTCGTCTGGATTGTGGTACCTGGGGTGTCATGGGCATCGGTATGGGCTATGCCATCGGTGCTAGCGTGACTTCTGGTTCTCCGGTTGTCGCCATTGAAGGTGATAGTGCTTTTGGTTTCAGTGGGATGGAAATTGAAACGATTTGTCGATATAACCTGCCGGTGACGATCGTTATTTTTAATAATGGCGGCATCTACAGAGGAGACGGTGTTGATCTCAGTGGCGCTGGTGCACCATCACCAACGGATCTGTTGCACCATGCAAGGTATGACAAATTAATGGATGCGTTTCGTGGCGTTGGCTATAACGTCACCACGACAGATGAACTTCGTCATGCTTTAACCACCGGTATTCAGTCGCGCAAACCGACCATTATTAATGTGGTCATCGACCCTGCAGCAGGAACTGAAAGTGGCCATATTACCAAACTTAACCCAAAACAAGTCGCTGGTAATTAA", + "dna_sequence_length": 1695, + "functions": [ + "oxalyl CoA decarboxylase, ThDP-dependent" + ], + "id": "CDS_2358", + "location": [ + [ + "NC_000913", + 2491950, + "-", + 1695 + ] + ], + "md5": "085f72ff9bb68e31ee4a81db0ff64c8a", + "parent_gene": "", + "protein_md5": "77ee9dd7abd037d9298ee614cd78d715", + "protein_translation": "MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVVGDIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDAFRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQVAGN", + "protein_translation_length": 564, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007828" + ], + [ + "gene_synonym", + "ECK2370" + ], + [ + "gene_synonym", + "EcoGene:EG14145" + ], + [ + "gene_synonym", + "GI:16130306" + ], + [ + "gene_synonym", + "GeneID:946842" + ], + [ + "gene_synonym", + "JW2371" + ], + [ + "gene_synonym", + "NP_416875.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69902" + ], + [ + "gene_synonym", + "b2374" + ], + [ + "gene_synonym", + "frc" + ], + [ + "gene_synonym", + "yfdW" + ] + ], + "dna_sequence": 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"yfdZ" + ] + ], + "dna_sequence": 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"JW2383" + ], + [ + "gene_synonym", + "NP_416887.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77579" + ], + [ + "gene_synonym", + "b2386" + ], + [ + "gene_synonym", + "fryC" + ], + [ + "gene_synonym", + "ypdG" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW5391" + ], + [ + "gene_synonym", + "NP_416896.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23842" + ], + [ + "gene_synonym", + "b2395" + ], + [ + "gene_synonym", + "yfeA" + ] + ], + "dna_sequence": 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"protein_translation_length": 671, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007942" + ], + [ + "gene_synonym", + "ECK2407" + ], + [ + "gene_synonym", + "EcoGene:EG14169" + ], + [ + "gene_synonym", + "GI:16130338" + ], + [ + "gene_synonym", + "GeneID:946869" + ], + [ + "gene_synonym", + "JW2404" + ], + [ + "gene_synonym", + "NP_416907.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77173" + ], + [ + "gene_synonym", + "b2412" + ], + [ + "gene_synonym", + "zipA" + ] + ], + "dna_sequence": 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"location": [ + [ + "NC_000913", + 2537237, + "-", + 852 + ] + ], + "md5": "4759e93afed869b62567b3492fdeaa4a", + "parent_gene": "", + "protein_md5": "d371d2d204ff54d40970d93dbfef7c21", + "protein_translation": "MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGLNVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVKTDLKGTGDLFCAQLISGLLKGKALTDAVHRAGLRVLEVMRYTQQHESDELILPPLAEA", + "protein_translation_length": 283, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007977" + ], + [ + "gene_synonym", + "ECK2414" + ], + [ + "gene_synonym", + "EcoGene:EG12644" + ], + [ + "gene_synonym", + "GI:16130345" + ], + [ + "gene_synonym", + "GeneID:946876" + ], + [ + "gene_synonym", + "JW2412" + ], + [ + "gene_synonym", + "NP_416914.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q47702" + ], + [ + "gene_synonym", + "b2419" + ], + [ + "gene_synonym", + "yfeK" + ] + ], + "dna_sequence": "ATGAAGAAAATCATTTGTCTGGTCATTACACTACTAATGACACTCCCCGTTTACGCGAAGTTAACTGCCCATGAAGAAGCCCGCATCAACGCCATGCTGGAGGGATTAGCACAGAAAAAGGATTTGATATTTGTGCGCAACGGTGATGAACATACCTGCTATGAAGCGGTTTCTCATCTGCGTCTGAAGCTCGGCAATACCCGTAACCGCATTGACACTGCCGAGCAGTTTATTGATAAGGTTGCTTCGTCGTCATCGATTACTGGGAAGCCGTATATTGTGAAGATCCCCGGTAAGAGCGATGAGAACGCACAGCCTTTTTTACATGCGTTAATTGCGCAGACGGATAAAACGGTGCCTGCGGAAGGAAATTAA", + "dna_sequence_length": 375, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2399", + "location": [ + [ + "NC_000913", + 2537342, + "+", + 375 + ] + ], + "md5": "290a821d3d7f0c0842fc42a9a46bbec5", + "parent_gene": "", + "protein_md5": "b2fa010e4341b27b468c57421675913c", + "protein_translation": "MKKIICLVITLLMTLPVYAKLTAHEEARINAMLEGLAQKKDLIFVRNGDEHTCYEAVSHLRLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKIPGKSDENAQPFLHALIAQTDKTVPAEGN", + "protein_translation_length": 124, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007979" + ], + [ + "gene_synonym", 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(O-acetylserine sulfhydrolase B)" + ], + "id": "CDS_2401", + "location": [ + [ + "NC_000913", + 2539583, + "-", + 912 + ] + ], + "md5": "f046b6c73a0c0c7970e9eee704caad06", + "parent_gene": "", + "protein_md5": "411405b610696c93d210c34800289bf8", + "protein_translation": "MSTLEQTIGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGSVKDRAALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPTEYLPGIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPDAVVVAIICDRGDRYLSTGVFGEEHFSQGAGI", + "protein_translation_length": 303, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0007986" + ], + [ + "gene_synonym", + "ECK2417" + ], + [ + "gene_synonym", + "EcoGene:EG10183" + ], + [ + "gene_synonym", + "GI:16130348" + ], + [ + "gene_synonym", + "GeneID:946889" + ], + [ + "gene_synonym", + "JW2415" + ], + [ + "gene_synonym", + "NP_416917.1" + ], + [ + "gene_synonym", + 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"gene_synonym", + "ASAP:ABE-0008028" + ], + [ + "gene_synonym", + "ECK2429" + ], + [ + "gene_synonym", + "EcoGene:EG14168" + ], + [ + "gene_synonym", + "GI:90111435" + ], + [ + "gene_synonym", + "GeneID:946917" + ], + [ + "gene_synonym", + "JW2427" + ], + [ + "gene_synonym", + "NP_416929.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76539" + ], + [ + "gene_synonym", + "b2434" + ], + [ + "gene_synonym", + "ypeA" + ] + ], + "dna_sequence": "ATGGAGATACGCGTATTTCGCCAGGAAGATTTCGAAGAGGTCATCACCCTTTGGGAGCGTTGCGACTTGCTGCGTCCGTGGAACGATCCGGAAATGGACATCGAGCGTAAGATGAACCATGACGTCAGTTTGTTTTTGGTCGCTGAGGTAAACGGTGACGTGGTCGGAACGGTGATGGGCGGTTATGACGGGCATCGCGGGTCTGCTTATTATCTTGGCGTGCATCCAGAGTTTCGTGGGCGTGGGATTGCCAATGCGTTGCTTAATCGGCTGGAGAAAAAGCTGATTGCTCGTGGCTGCCCGAAAATTCAGATCAATGTGCCGGAAGATAACGACATGGTGCTCGGAATGTATGAACGCCTGGGATATGAACACGCCGACGTGCTGAGTCTGGGTAAGCGTTTGATTGAAGATGAAGAGTACTGA", + "dna_sequence_length": 426, + "functions": [ + "GNAT family putative N-acetyltransferase" + ], + "id": "CDS_2414", + 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structural protein" + ], + "id": "CDS_2442", + "location": [ + [ + "NC_000913", + 2575805, + "-", + 336 + ] + ], + "md5": "cade4d384b5212f31340dbb125bc678c", + "parent_gene": "", + "protein_md5": "c19304397ac23e2aa387684ae488c741", + "protein_translation": "MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIMTLTPGETAMIAGDLALKAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLNYTLCEMTKS", + "protein_translation_length": 111, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008111" + ], + [ + "gene_synonym", + "ECK2458" + ], + [ + "gene_synonym", + "EcoGene:EG14193" + ], + [ + "gene_synonym", + "GI:16130388" + ], + [ + "gene_synonym", + "GeneID:946947" + ], + [ + "gene_synonym", + "JW2447" + ], + [ + "gene_synonym", + "NP_416958.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76558" + ], + [ + "gene_synonym", + "b2463" + ], + [ + "gene_synonym", + "maeB" + ], + [ + "gene_synonym", + "ypfF" + ] + ], + "dna_sequence": 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"GI:16130389" + ], + [ + "gene_synonym", + "GeneID:947006" + ], + [ + "gene_synonym", + "JW2448" + ], + [ + "gene_synonym", + "NP_416959.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A867" + ], + [ + "gene_synonym", + "b2464" + ], + [ + "gene_synonym", + "talA" + ] + ], + "dna_sequence": 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"ATGTCCCGAAAAGACCTTGCCAATGCGATTCGCGCACTCAGTATGGATGCGGTACAAAAAGCCAACTCTGGTCATCCCGGCGCGCCGATGGGCATGGCTGATATTGCCGAAGTGCTGTGGAACGATTTTCTTAAACATAACCCTACCGACCCAACCTGGTATGATCGCGACCGCTTTATTCTTTCCAACGGTCACGCGTCGATGCTGCTCTACAGTTTGCTACATCTGACCGGTTACGACCTGCCGCTGGAAGAACTGAAGAACTTCCGTCAGTTGCATTCGAAAACCCCAGGCCACCCGGAGATTGGCTATACGCCAGGCGTTGAAACCACCACCGGCCCGCTTGGACAAGGTTTGGCGAACGCCGTCGGGCTGGCGATAGCAGAGCGTACACTGGCGGCGCAGTTTAACCAGCCAGACCATGAGATCGTCGATCACTTCACCTATGTGTTTATGGGCGACGGCTGCCTGATGGAAGGTATTTCCCACGAAGTCTGTTCGCTGGCAGGCACGCTGGGACTGGGCAAGCTGATTGGTTTTTACGATCACAACGGTATTTCCATCGACGGTGAAACAGAAGGCTGGTTTACCGACGATACGGCAAAACGTTTTGAAGCCTATCACTGGCATGTGATCCATGAAATCGACGGTCACGATCCGCAGGCGGTGAAGGAAGCGATCCTTGAAGCGCAAAGCGTGAAAGATAAGCCGTCGCTGATTATCTGCCGTACGGTGATTGGCTTTGGTTCGCCGAATAAAGCAGGTAAGGAAGAGGCGCACGGCGCACCACTGGGGGAAGAAGAAGTGGCGCTGGCACGGCAAAAACTGGGCTGGCACCATCCGCCATTTGAGATCCCTAAAGAGATTTATCACGCCTGGGATGCCCGTGAAAAAGGCGAAAAAGCGCAGCAGAGCTGGAATGAGAAGTTTGCCGCCTATAAAAAGGCTCATCCGCAACTGGCAGAAGAGTTTACCCGACGGATGAGCGGTGGTTTACCGAAGGACTGGGAGAAAACGACTCAGAAATATATCAATGAGTTACAGGCAAATCCGGCGAAAATCGCTACCCGTAAGGCTTCGCAAAATACGCTTAACGCTTACGGGCCGATGCTGCCTGAGTTGCTCGGCGGTTCGGCGGATCTGGCTCCCAGCAACCTGACCATCTGGAAAGGTTCTGTTTCGCTGAAGGAAGATCCAGCGGGCAACTACATTCACTACGGGGTGCGTGAATTTGGCATGACCGCTATCGCCAACGGCATCGCGCACCACGGCGGCTTTGTGCCGTATACCGCGACGTTCCTGATGTTTGTTGAATACGCCCGTAACGCCGCGCGGATGGCGGCACTGATGAAAGCGCGGCAGATTATGGTTTATACCCACGACTCAATTGGCCTGGGCGAAGATGGTCCGACGCACCAGGCTGTTGAGCAACTGGCCAGCCTGCGCTTAACGCCAAATTTCAGCACCTGGCGACCGTGCGATCAGGTGGAAGCGGCGGTGGGCTGGAAGCTGGCGGTTGAGCGCCACAACGGACCGACGGCACTGATCCTCTCAAGGCAGAATCTGGCCCAGGTGGAACGTACGCCGGATCAGGTTAAAGAGATTGCTCGTGGCGGTTATGTGCTGAAAGACAGCGGCGGTAAGCCAGATATTATTCTGATTGCCACCGGTTCAGAGATGGAAATTACCCTGCAAGCGGCAGAGAAATTAGCAGGAGAAGGTCGCAATGTACGCGTAGTTTCCCTGCCCTCGACCGATATTTTCGACGCCCAGGATGAGGAATATCGGGAGTCGGTGTTGCCTTCTAACGTTGCGGCTCGCGTGGCGGTGGAAGCAGGTATTGCCGATTACTGGTACAAGTATGTTGGTCTGAAAGGGGCAATTGTCGGGATGACGGGTTACGGGGAATCTGCTCCGGCGGATAAGCTGTTCCCGTTCTTTGGCTTTACCGCCGAGAATATTGTGGCAAAAGCGCATAAGGTGCTGGGAGTGAAAGGTGCCTGA", 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"JW2450" + ], + [ + "gene_synonym", + "NP_416961.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76559" + ], + [ + "gene_synonym", + "b2466" + ], + [ + "gene_synonym", + "ypfG" + ] + ], + "dna_sequence": 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[ + "NC_000913", + 2596737, + "-", + 864 + ] + ], + "md5": "6afe8286c32d38e0b472887d6659018d", + "parent_gene": "", + "protein_md5": "79de25710027b9941b278a537a881745", + "protein_translation": "MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVVLVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMGKTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFAQGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHSMQQQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGDPAQCNTFGKSI", + "protein_translation_length": 287, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008156" + ], + [ + "gene_synonym", + "ECK2472" + ], + [ + "gene_synonym", + "EcoGene:EG10791" + ], + [ + "gene_synonym", + "GI:16130401" + ], + [ + "gene_synonym", + "GeneID:946957" + ], + [ + "gene_synonym", + "JW2461" + ], + [ + "gene_synonym", + "NP_416971.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7D7" + ], + [ + "gene_synonym", + "ade" + ], + [ + "gene_synonym", + "b2476" + ], + [ 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"gene_synonym", + "JW2487" + ], + [ + "gene_synonym", + "NP_416997.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFL6" + ], + [ + "gene_synonym", + "b2502" + ], + [ + "gene_synonym", + "ppx" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG14202" + ], + [ + "gene_synonym", + "GI:16130428" + ], + [ + "gene_synonym", + "GeneID:946968" + ], + [ + "gene_synonym", + "JW2488" + ], + [ + "gene_synonym", + "NP_416998.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77172" + ], + [ + "gene_synonym", + "b2503" + ], + [ + "gene_synonym", + "yfgF" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "ASAP:ABE-0008270" + ], + [ + "gene_synonym", + "ECK2507" + ], + [ + "gene_synonym", + "EcoGene:EG14207" + ], + [ + "gene_synonym", + "GI:90111450" + ], + [ + "gene_synonym", + "GeneID:946983" + ], + [ + "gene_synonym", + "JW5403" + ], + [ + "gene_synonym", + "NP_417006.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6P5" + ], + [ + "gene_synonym", + "b2511" + ], + [ + "gene_synonym", + "der" + ], + [ + "gene_synonym", + "engA" + ], + [ + "gene_synonym", + "yfgK" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "JW2530" + ], + [ + "gene_synonym", + "NP_417041.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77315" + ], + [ + "gene_synonym", + "b2546" + ], + [ + "gene_synonym", + "yphD" + ] + ], + "dna_sequence": 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+ "dna_sequence_length": 999, + "functions": [ + "putative sugar ABC transporter permease" + ], + "id": "CDS_2529", + "location": [ + [ + "NC_000913", + 2676825, + "-", + 999 + ] + ], + "md5": "9a03144075b60cad635fc3de321c9c88", + "parent_gene": "", + "protein_md5": "60641f629888667b5b1346e1f87fde86", + "protein_translation": "MSASSLPLPQGKSVSLKQFVSRHINEIGLLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFEVPLAVACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALRGMGLFMTNALPVPIDENEVLDWLGGQFLGVPVSALIMIVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLGINSFFQQVVRGVIIVVAVLANILLTQRSSKAKR", + "protein_translation_length": 332, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008376" + ], + [ + "gene_synonym", + "ECK2544" + ], + [ + "gene_synonym", + "EcoGene:EG13466" + ], + [ + "gene_synonym", + "GI:16130472" + ], + [ + "gene_synonym", + "GeneID:948990" + ], + [ + "gene_synonym", + "JW2531" + ], 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"ATGTTCACGGCAACAGAGGCAGTCCCGGTAGCAAAAGTGGTGGCAGGAAATAAGCGTTATCCCGGCGTCGTTGCGCTGGATAACGTTAACTTCACGCTCAATAAAGGCGAAGTTCGTGCGCTGTTAGGTAAAAACGGCGCGGGCAAATCGACTCTCATTCGAATGCTTACCGGCAGCGAACGCCCGGATAGCGGTGATATCTGGATTGGCGAGACGCGACTGGAAGGTGACGAAGCTACGCTGACTCGCCGTGCCGCTGAACTGGGGGTGCGCGCGGTTTATCAGGAGTTAAGTCTGGTGGAAGGGCTGACAGTGGCGGAAAACCTCTGCCTCGGTCAGTGGCCCCGCCGCAACGGCATGATTGATTACCTGCAAATGGCGCAGGATGCCCAACGTTGCTTACAGGCGCTGGGCGTTGACGTTAGTCCTGAACAACTTGTTTCAACGCTAAGCCCGGCGCAAAAGCAGCTGGTGGAAATTGCGCGGGTGATGAAGGGCGAGCCGCGCGTGGTCATTCTTGATGAACCTACCAGTTCGCTTGCGAGTGCGGAAGTTGAACTGGTGATCAGCGCGGTGAAAAAGATGTCGGCACTGGGCGTGGCGGTGATTTATGTCAGCCACCGGATGGAAGAAATTCGCCGCATTGCCTCCTGTGCCACCGTTATGCGCGATGGTCAGGTGGCGGGCGATGTGATGCTCGAAAACACCTCCACGCATCATATTGTGTCGCTGATGCTCGGGCGCGATCACGTTGATATTGCGCCGGTAGCCCCTCAGGAAATTGTGGATCAGGCCGTGCTGGAAGTCCGTGCGTTACGCCATAAGCCCAAGCTGGAGGATATCAGTTTTACGCTACGTCGTGGCGAAGTGCTCGGCATTGCTGGTCTGCTGGGGGCAGGGCGCAGTGAATTGCTGAAGGCGATTGTTGGGCTGGAGGAGTATGAACAGGGCGAAATTGTTATCAACGGCGAGAAAATCACGCGCCCCGATTACGGCGACATGCTGAAACGCGGCATTGGCTATACGCCAGAAAACCGCAAAGAAGCGGGGATCATTCCCTGGTTGGGCGTTGACGAAAATACAGTGCTGACCAATCGGCAAAAAATCAGCGCCAACGGTGTGCTGCAATGGTCCACCATCCGCCGCCTGACCGAAGAGGTGATGCAGCGGATGACGGTCAAGGCCGCCAGTAGCGAAACACCCATCGGCACGCTTTCTGGTGGCAATCAGCAAAAAGTGGTGATCGGTCGTTGGGTCTATGCTGCCAGCCAGATTTTGTTGCTCGACGAGCCAACGCGCGGCGTCGATATCGAAGCCAAACAGCAGATTTACCGTATTGTCCGTGAGCTGGCTGCCGAAGGAAAAAGCGTGGTGTTTATCTCCAGTGAAGTGGAGGAGTTGCCGCTGGTGTGTGACCGCATCCTGTTATTACAGCACGGCACGTTCTCGCAGGAGTTTCACGCTCCGGTCAATGTGGATGAGCTGATGTCCGCCATTCTGTCTGTGCACTGA", + "dna_sequence_length": 1512, + "functions": [ + "putative sugar ABC transporter ATPase" + ], + "id": "CDS_2530", + "location": [ + [ + "NC_000913", + 2678361, + "-", + 1512 + ] + ], + "md5": "de039a03f219b7d964de07c201f5719c", + "parent_gene": "", + "protein_md5": "f70b35a91014429c50b39103afb4ac29", + "protein_translation": "MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGKNGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEGLTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEIARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASCATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKPKLEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLEEYEQGEIVINGEKITRPDYGDMLKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKISANGVLQWSTIRRLTEEVMQRMTVKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVRELAAEGKSVVFISSEVEELPLVCDRILLLQHGTFSQEFHAPVNVDELMSAILSVH", + "protein_translation_length": 503, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008378" + ], + [ + "gene_synonym", + "ECK2545" + ], + [ + "gene_synonym", + "EcoGene:EG13467" + ], + [ + "gene_synonym", + "GI:16130473" + ], + [ + "gene_synonym", + "GeneID:947020" + ], + [ + "gene_synonym", + "JW2532" + ], + [ + "gene_synonym", + "NP_417043.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P77269" + ], + [ + "gene_synonym", + "b2548" + ], + [ + "gene_synonym", + "yphF" + ] + ], + "dna_sequence": "ATGCCTACAAAAATGAGAACAACCCGTAATCTATTATTAATGGCTACGCTATTAGGTAGCGCACTATTTGCCAGGGCTGCGGAAAAAGAAATGACCATTGGCGCAATATACCTTGATACTCAGGGATACTACGCTGGAGTGCGTCAGGGCGTTCAGGATGCGGCAAAAGATTCCTCAGTACAAGTTCAGTTAATAGAAACTAACGCCCAGGGTGATATTTCGAAAGAAAGTACCTTTGTTGATACCCTCGTGGCGCGTAATGTCGATGCCATTATTTTATCGGCAGTGTCTGAAAATGGCAGTAGCCGTACCGTTCGTCGCGCCAGTGAAGCGGGCATTCCGGTGATTTGCTACAACACCTGTATTAATCAAAAGGGGGTCGATAAATATGTCTCGGCGTATCTGGTCGGCGATCCGCTGGAATTTGGTAAAAAACTGGGTAACGCTGCCGCTGATTATTTTATTGCCAATAAAATTGACCAGCCGAAAATTGCCGTCATCAATTGCGAAGCCTTTGAAGTTTGTGTGCAGCGACGTAAAGGATTTGAAGAAGTTTTAAAATCCCGCGTTCCCGGCGCGCAAATTGTCGCTAATCAGGAAGGGACTGTTTTAGATAAAGCGATTTCCGTTGGTGAAAAACTAATTATCTCCACGCCGGATCTCAACGCCATTATGGGGGAATCGGGCGGTGCGACACTCGGCGCGGTAAAAGCGGTACGTAATCAAAATCAGGCCGGAAAAATTGCTGTTTTCGGTTCGGATATGACAACCGAAATTGCTCAGGAGCTGGAAAACAATCAGGTGCTGAAAGCGGTAGTGGATATTTCCGGTAAGAAAATGGGCAATGCTGTTTTCGCGCAAACATTGAAGGTTATCAATAAACAAGCCGACGGTGAAAAAGTGATTCAGGTGCCTATCGATCTCTATACCAAAACGGAAGACGGTAAACAGTGGCTGGCAACGCACGTTGATGGTCTGCCCTAA", + "dna_sequence_length": 984, + "functions": [ + "putative sugar ABC transporter periplasmic binding protein" + ], + "id": "CDS_2531", + "location": [ + [ + "NC_000913", + 2679367, + "-", + 984 + ] + ], + "md5": "50be0e2b4f4f793b68b0bc529e9f807d", + "parent_gene": "", + "protein_md5": "d2d4694791945a7992117e83cca3474d", + "protein_translation": "MPTKMRTTRNLLLMATLLGSALFARAAEKEMTIGAIYLDTQGYYAGVRQGVQDAAKDSSVQVQLIETNAQGDISKESTFVDTLVARNVDAIILSAVSENGSSRTVRRASEAGIPVICYNTCINQKGVDKYVSAYLVGDPLEFGKKLGNAAADYFIANKIDQPKIAVINCEAFEVCVQRRKGFEEVLKSRVPGAQIVANQEGTVLDKAISVGEKLIISTPDLNAIMGESGGATLGAVKAVRNQNQAGKIAVFGSDMTTEIAQELENNQVLKAVVDISGKKMGNAVFAQTLKVINKQADGEKVIQVPIDLYTKTEDGKQWLATHVDGLP", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008380" + ], + [ + "gene_synonym", + "ECK2546" + ], + [ + "gene_synonym", + "EcoGene:EG13468" + ], + [ + "gene_synonym", + "GI:162135907" + ], + [ + "gene_synonym", + "GeneID:947021" + ], + [ + "gene_synonym", + "JW5405" + ], + [ + "gene_synonym", + "NP_417044.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76585" + ], + [ + "gene_synonym", + "b2549" + ], + [ + "gene_synonym", + "yphG" + ] + ], + "dna_sequence": "ATGACTCCAGTAAAAGTGTGGCAAGAGCGCGTTGAGATCCCGACCTATGAAACCGGGCCGCAGGATATACATCCCATGTTCCTGGAAAATCGCGTTTATCAGGGATCGTCCGGCGCGGTTTATCCCTACGGCGTGACCGATACGCTGAGCGAGCAGAAAACCCTGAAATCCTGGCAGGCGGTGTGGCTGGAAAACGACTACATCAAAGTGATGATCCTGCCGGAACTGGGCGGTCGGGTGCATCGCGCGTGGGATAAAGTGAAACAGCGCGATTTTGTTTATCACAATGAAGTCATTAAACCTGCGCTGGTGGGGCTGCTGGGGCCGTGGATTTCCGGTGGGATTGAGTTTAACTGGCCGCAACATCATCGCCCGACCACCTTTATGCCCGTTGATTTCACCCTCGAAGCCCATGAAGACGGTGCACAGACGGTGTGGGTAGGCGAAACGGAGCCGATGCATGGTTTACAGGTGATGACAGGTTTCACCCTGCGCCCTGACCGGGCGGCGCTGGAAATCGCCAGCCGCGTCTATAACGGGAACGCCACGCCGCGTCATTTCTTGTGGTGGGCCAACCCGGCAGTGAAAGGGGGGGAAGGGCATCAGAGCGTCTTCCCGCCGGATGTAACGGCGGTGTTTGATCACGGCAAACGGGCCGTCTCCGCTTTCCCCATCGCTACCGGCACTTACTACAAAGTGGACTACTCCGCTGGAGTGGACATTTCTCGCTATAAAAATGTGCCTGTTCCAACCTCATATATGGCCGAAAAATCGCAGTACGATTTTGTCGGCGCGTGGTGTCACGATGAAGATGGCGGTTTGCTGCACGTTGCCAACCACCATATTGCGCCAGGTAAAAAACAGTGGAGTTGGGGACACAGTGAATTTGGCCAGGCGTGGGATAAGAGTCTGACCGACAATAACGGCCCGTATATCGAACTGATGACCGGTATTTTTGCCGATAACCAGCCCGATTTTACCTGGCTTGATGCTTACGAAGAGAAGCGTTTTGAGCAGTATTTCCTGCCTTATCATTCTTTGGGCATGGTGCAAAATGCCTCCCGCGATGCGGTGATAAAACTCCAGCGTAGTAAGCGGGGGATTGAGTGGGGGCTGTATGCCATCTCTCCGTTGAACGGATACCGCCTGGCGATCCGCGAAATCGGTAAATGCAACGCGTTACTTGATGATGCCGTGGCACTGATGCCTGCGACCGCCATCCAGGGCGTGTTGCACGGTATCAATCCTGAAAGGCTGACCATTGAGCTCTCCGATGCCGACGGCAATATTGTACTGAGTTATCAGGAACATCAGCCGCAAGCGTTGCCGTTACCGGACGTCGCCAAAGCGCCACTGGCAGCACAAGACATTACCAGTACAGATGAAGCCTGGTTTATCGGTCAGCATCTGGAGCAATATCATCACGCCAGCCGTTCACCGTTCGATTACTACCTGCGCGGCGTGGCGCTGGACCCGCTGGATTATCGCTGTAACCTGGCGCTGGCGATGCTGGAATATAACCGCGCAGATTTCCCGCAAGCGGTGGCGTATGCCACTCAGGCTCTGAAACGCGCACATGCGCTGAACAAAAATCCGCAGTGCGGACAGGCGAGTTTGATTCGCGCCAGTGCTTACGAACGTCAGGGACAATATCAACAAGCCGAAGAGGATTTCTGGCGTGCGGTCTGGAGCGGCAACAGCAAAGCCGGTGGCTATTATGGCCTGGCACGACTGGCGGCGCGTAATGGTAACTTCGACGCTGGTCTGGATTTTTGCCAACAAAGTCTTCGCGCCTGCCCAACCAATCAGGAAGTGCTTTGCCTGCATAATCTGCTGCTGGTGTTAAGTGGTCGTCAGGACAACGCGCGTGTGCAGCGCGAGAAACTGCTGCGCGATTATCCGCTGAACGCCACTCTGTGGTGGCTGAACTGGTTCGATGGTCGTAGCGAATCAGCTCTCGCGCAGTGGCGCGGTCTGTGTCAGGGACGCGACGTTAACGCCCTGATGACCGCCGGGCAACTGATTAACTGGGGAATGCCCACCCTGGCGGCAGAGATGCTGAACGCACTGGACTGCCAGCGCACGCTGCCGCTTTACCTGCAAGCCAGCTTGCTGCCGAAAGCCGAACGTGGCGAACTGGTCGCAAAAGCCATTGATGTCTTCCCGCAGTTTGTCCGTTTCCCGAATACGCTGGAAGAAGTGGCGGCGCTGGAGAGTATTGAAGAGTGCTGGTTTGCTCGCCATTTACTAGCTTGCTTCTACTACAACAAACGTAGCTACAACAAAGCCATTGCCTTTTGGCAACGTTGCGTAGAGATGTCGCCGGAGTTTGCCGACGGCTGGCGCGGGTTAGCGATCCATGCGTGGAATAAGCAACACGATTATGAGCTGGCCGCGCGTTATCTTGATAATGCTTATCAGCTTGCGCCGCAGGATGCACGTCTGCTTTTCGAACGGGATTTGCTGGATAAGTTAAGTGGAGCCACACCGGAGAAACGACTGGCGCGTCTGGAAAATAATCTGGAAATTGCGCTGAAACGCGACGACATGACCGCAGAACTGCTCAATTTGTGGCATCTCACGGGTCAGGCAGACAAAGCGGCGGACATTCTCGCCACGCGCAAATTCCACCCGTGGGAAGGCGGGGAAGGGAAGGTCACCAGTCAGTTTATCCTCAACCAGTTATTACGCGCCTGGCAGCATCTTGATGCCAGACAGCCGCAGCAGGCCTGCGAACTGCTTCATGCCGCGCTGCATTATCCGGAGAATTTAAGCGAAGGCCGTTTACCGGGGCAAACTGATAACGACATCTGGTTCTGGCAGGCGATATGCGCCAACGCGCAGGGCGATGAAACTGAAGCGACGCGTTGTTTACGTCTGGCGGCGACCGGCGATCGCACTATTAACATTCACAGTTATTACAACGATCAGCCGGTTGATTATCTCTTCTGGCAAGGGATGGCGCTGCGACTGCTGGGCGAACAACAAACCGCACAGCAACTGTTTAGTGAAATGAAACAGTGGGCGCAAGAGATGGCGAAAACCAGTATCGAAGCGGATTTCTTTGCCGTCTCGCAACCTGACTTGTTGTCGCTGTATGGCGATTTACAACAGCAGCATAAAGAAAAATGCCTGATGGTGGCGATGCTGGCGTCCGCGGGACTCGGGGAGGTTGCGCAATATGAGTCTGCTCGCGCTGAATTGACGGCGATTAATCCGGCTTGGCCGAAAGCGGCATTATTCACCACCGTGATGCCTTTTATTTTTAACCGCGTTCACTAA", 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"MTPVKVWQERVEIPTYETGPQDIHPMFLENRVYQGSSGAVYPYGVTDTLSEQKTLKSWQAVWLENDYIKVMILPELGGRVHRAWDKVKQRDFVYHNEVIKPALVGLLGPWISGGIEFNWPQHHRPTTFMPVDFTLEAHEDGAQTVWVGETEPMHGLQVMTGFTLRPDRAALEIASRVYNGNATPRHFLWWANPAVKGGEGHQSVFPPDVTAVFDHGKRAVSAFPIATGTYYKVDYSAGVDISRYKNVPVPTSYMAEKSQYDFVGAWCHDEDGGLLHVANHHIAPGKKQWSWGHSEFGQAWDKSLTDNNGPYIELMTGIFADNQPDFTWLDAYEEKRFEQYFLPYHSLGMVQNASRDAVIKLQRSKRGIEWGLYAISPLNGYRLAIREIGKCNALLDDAVALMPATAIQGVLHGINPERLTIELSDADGNIVLSYQEHQPQALPLPDVAKAPLAAQDITSTDEAWFIGQHLEQYHHASRSPFDYYLRGVALDPLDYRCNLALAMLEYNRADFPQAVAYATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGNSKAGGYYGLARLAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARVQREKLLRDYPLNATLWWLNWFDGRSESALAQWRGLCQGRDVNALMTAGQLINWGMPTLAAEMLNALDCQRTLPLYLQASLLPKAERGELVAKAIDVFPQFVRFPNTLEEVAALESIEECWFARHLLACFYYNKRSYNKAIAFWQRCVEMSPEFADGWRGLAIHAWNKQHDYELAARYLDNAYQLAPQDARLLFERDLLDKLSGATPEKRLARLENNLEIALKRDDMTAELLNLWHLTGQADKAADILATRKFHPWEGGEGKVTSQFILNQLLRAWQHLDARQPQQACELLHAALHYPENLSEGRLPGQTDNDIWFWQAICANAQGDETEATRCLRLAATGDRTINIHSYYNDQPVDYLFWQGMALRLLGEQQTAQQLFSEMKQWAQEMAKTSIEADFFAVSQPDLLSLYGDLQQQHKEKCLMVAMLASAGLGEVAQYESARAELTAINPAWPKAALFTTVMPFIFNRVH", 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"gene_synonym", + "ECK2557" + ], + [ + "gene_synonym", + "EcoGene:EG11372" + ], + [ + "gene_synonym", + "GI:145698301" + ], + [ + "gene_synonym", + "GeneID:947027" + ], + [ + "gene_synonym", + "JW2543" + ], + [ + "gene_synonym", + "NP_417054.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68398" + ], + [ + "gene_synonym", + "b2559" + ], + [ + "gene_synonym", + "tadA" + ], + [ + "gene_synonym", + "yfhC" + ] + ], + "dna_sequence": "TTGTCTGAAGTCGAATTTAGCCACGAATACTGGATGCGTCACGCGCTGACGCTGGCGAAACGTGCCTGGGATGAGCGGGAAGTGCCGGTCGGCGCGGTATTAGTGCATAACAATCGGGTAATCGGCGAAGGCTGGAACCGCCCGATTGGTCGCCATGATCCCACCGCACATGCAGAAATCATGGCCCTGCGGCAGGGTGGTCTGGTGATGCAAAATTATCGTCTGATCGACGCCACGTTGTATGTCACGCTTGAACCATGTGTAATGTGTGCCGGAGCGATGATCCACAGTCGCATTGGTCGCGTGGTCTTTGGTGCGCGTGACGCGAAAACTGGCGCTGCGGGATCTTTAATGGATGTGCTGCATCATCCGGGTATGAATCACCGAGTGGAAATTACGGAAGGAATACTGGCGGATGAGTGCGCGGCGTTGCTCAGTGACTTCTTTCGCATGCGCCGCCAGGAAATTAAAGCGCAGAAAAAAGCGCAATCCTCGACGGATTAA", + "dna_sequence_length": 504, + "functions": [ + "tRNA-specific adenosine deaminase" + ], + "id": "CDS_2542", + "location": [ + [ + "NC_000913", + 2697857, + "-", + 504 + ] + ], + "md5": "782338ca990e23df6c3445fb37a39989", + "parent_gene": "", + "protein_md5": "bfbf4b8e66e6d230b32679dffad7d9f0", + "protein_translation": "MSEVEFSHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFFRMRRQEIKAQKKAQSSTD", + "protein_translation_length": 167, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008421" + ], + [ + "gene_synonym", + "ECK2558" + ], + [ + "gene_synonym", + "EcoGene:EG11371" + ], + [ + "gene_synonym", + "GI:90111459" + ], + [ + "gene_synonym", + "GeneID:947026" + ], + [ + "gene_synonym", + "JW5408" + ], + [ + "gene_synonym", + "NP_417055.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD42" + ], + [ + "gene_synonym", + "b2560" + ], + [ + "gene_synonym", + "pgpC" + ], + [ + "gene_synonym", + "yfhB" + ] + ], + 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"gene_synonym", + "NP_417064.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60785" + ], + [ + "gene_synonym", + "b2569" + ], + [ + "gene_synonym", + "lepA" + ] + ], + "dna_sequence": 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"location": [ + [ + "NC_000913", + 2709404, + "-", + 651 + ] + ], + "md5": "f8c71bf119421b724dd17dc42a9c5a54", + "parent_gene": "", + "protein_md5": "802a622f16887530be1ab825e4ad3e5c", + "protein_translation": "MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMRGDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANNGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ", + "protein_translation_length": 216, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008467" + ], + [ + "gene_synonym", + "ECK2571" + ], + [ + "gene_synonym", + "EcoGene:EG11897" + ], + [ + "gene_synonym", + "GI:16130498" + ], + [ + "gene_synonym", + "GeneID:947050" + ], + [ + "gene_synonym", + "JW2557" + ], + [ + "gene_synonym", + "NP_417068.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGB6" + ], + [ + "gene_synonym", + "b2573" + ], + [ + "gene_synonym", + "rpoE" + ], + [ + "gene_synonym", + "sigE" + ] + ], + "dna_sequence": 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"protein_translation": "MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVWQLTRH", + "protein_translation_length": 107, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008515" + ], + [ + "gene_synonym", + "ECK2585" + ], + [ + "gene_synonym", + "EcoGene:EG10522" + ], + [ + "gene_synonym", + "GI:16130512" + ], + [ + "gene_synonym", + "GeneID:947069" + ], + [ + "gene_synonym", + "JW2571" + ], + [ + "gene_synonym", + "NP_417082.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEX3" + ], + [ + "gene_synonym", + "b2587" + ], + [ + "gene_synonym", + "kgtP" + ], + [ + "gene_synonym", + "witA" + ] + ], + "dna_sequence": 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"GI:16130513" + ], + [ + "gene_synonym", + "GeneID:947077" + ], + [ + "gene_synonym", + "JW2573" + ], + [ + "gene_synonym", + "NP_417083.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63284" + ], + [ + "gene_synonym", + "b2592" + ], + [ + "gene_synonym", + "clpB" + ], + [ + "gene_synonym", + "htpM" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK2591" + ], + [ + "gene_synonym", + "EcoGene:EG12097" + ], + [ + "gene_synonym", + "GI:16130514" + ], + [ + "gene_synonym", + "GeneID:947089" + ], + [ + "gene_synonym", + "JW2575" + ], + [ + "gene_synonym", + "NP_417084.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33644" + ], + [ + "gene_synonym", + "b2593" + ], + [ + "gene_synonym", + "yfiH" + ] + ], + "dna_sequence": 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"EcoGene:EG11271" + ], + [ + "gene_synonym", + "GI:16130519" + ], + [ + "gene_synonym", + "GeneID:947080" + ], + [ + "gene_synonym", + "JW2579" + ], + [ + "gene_synonym", + "NP_417089.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AD72" + ], + [ + "gene_synonym", + "b2598" + ], + [ + "gene_synonym", + "pheAE" + ], + [ + "gene_synonym", + "pheL" + ] + ], + "dna_sequence": "ATGAAACACATACCGTTTTTCTTCGCATTCTTTTTTACCTTCCCCTGA", + "dna_sequence_length": 48, + "functions": [ + "pheA gene leader peptide" + ], + "id": "CDS_2577", + "location": [ + [ + "NC_000913", + 2737599, + "+", + 48 + ] + ], + "md5": "4cf0bd38b07546735b0b800bc615335c", + "parent_gene": "", + "protein_md5": "2efe0b4ae72e2aff55aa6f5f81f4505d", + "protein_translation": "MKHIPFFFAFFFTFP", + "protein_translation_length": 15, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008545" + ], + [ + "gene_synonym", + "ECK2596" + ], + [ + "gene_synonym", + "EcoGene:EG10707" + ], + [ + "gene_synonym", + "GI:16130520" + ], + [ + "gene_synonym", + "GeneID:947081" + ], + [ + "gene_synonym", + "JW2580" + ], + [ + "gene_synonym", + "NP_417090.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9J8" + ], + [ + "gene_synonym", + "b2599" + ], + [ + "gene_synonym", + "pheA" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:947115" + ], + [ + "gene_synonym", + "JW2581" + ], + [ + "gene_synonym", + "NP_417091.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07023" + ], + [ + "gene_synonym", + "b2600" + ], + [ + "gene_synonym", + "tyrA" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW5418" + ], + [ + "gene_synonym", + "NP_417120.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52130" + ], + [ + "gene_synonym", + "b2631" + ], + [ + "gene_synonym", + "rnlB" + ], + [ + "gene_synonym", + "yfjO" + ] + ], + "dna_sequence": "TTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTCCTCAGTTAATGAAATTGAGACGAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGTGCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGATCATGCTGGATACGGCCAAAATTATTGATGAGCAGGACGTTCCGACACATATCCTGAGCAAACTGACTTTTACTTTACGTAATCATCCTGAGTACCTAGAAGCCTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGA", + "dna_sequence_length": 372, + "functions": [ + "CP4-57 prophage", + "uncharacterized protein" + ], + "id": "CDS_2608", + "location": [ + [ + "NC_000913", + 2766984, + "+", + 372 + ] + ], + "md5": "8f273558df5eb868f1560e6f4dd2936d", + "parent_gene": "", + "protein_md5": "0c066ac7ccd9f2a815dddc2a9e736501", + "protein_translation": 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[ + "gene_synonym", + "GeneID:948060" + ], + [ + "gene_synonym", + "JW2636" + ], + [ + "gene_synonym", + "NP_417147.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25526" + ], + [ + "gene_synonym", + "b2661" + ], + [ + "gene_synonym", + "gabD" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG10361" + ], + [ + "gene_synonym", + "GI:16130576" + ], + [ + "gene_synonym", + "GeneID:948067" + ], + [ + "gene_synonym", + "JW2637" + ], + [ + "gene_synonym", + "NP_417148.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22256" + ], + [ + "gene_synonym", + "b2662" + ], + [ + "gene_synonym", + "gabT" + ] + ], + "dna_sequence": 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"GeneID:947149" + ], + [ + "gene_synonym", + "JW2651" + ], + [ + "gene_synonym", + "NP_417162.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37146" + ], + [ + "gene_synonym", + "b2676" + ], + [ + "gene_synonym", + "nrdF" + ], + [ + "gene_synonym", + "ygaD" + ] + ], + "dna_sequence": 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"functions": [ + "ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like protein" + ], + "id": "CDS_2645", + "location": [ + [ + "NC_000913", + 2803502, + "+", + 960 + ] + ], + "md5": "a5ddfd27fbbff075f681be44042d04a7", + "parent_gene": "", + "protein_md5": "d30c3989e5aaef4ce73878a434b0de67", + "protein_translation": "MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVETEDEDWNF", + "protein_translation_length": 319, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008814" + ], + [ + "gene_synonym", + "ECK2671" + ], + [ + "gene_synonym", + "EcoGene:EG10771" + ], + [ + "gene_synonym", + "GI:16130591" + ], + [ + "gene_synonym", + "GeneID:947148" + ], + [ + "gene_synonym", + "JW2652" + ], + [ + "gene_synonym", + "NP_417163.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14175" + ], + [ + "gene_synonym", + "b2677" + ], + [ + "gene_synonym", + "osrA" + ], + [ + "gene_synonym", + "proU" + ], + [ + "gene_synonym", + "proV" + ] + ], + "dna_sequence": "ATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGTAAATCCACAATGGTACGCCTTCTCAATCGCCTGATTGAACCCACCCGCGGGCAAGTGCTGATTGATGGTGTGGATATTGCCAAAATATCCGACGCCGAACTCCGTGAGGTGCGCAGAAAAAAGATTGCGATGGTCTTCCAGTCCTTTGCCTTAATGCCGCATATGACCGTGCTGGACAATACTGCGTTCGGTATGGAATTGGCCGGAATTAATGCCGAAGAACGCCGGGAAAAAGCCCTTGATGCACTGCGTCAGGTCGGGCTGGAAAATTATGCCCACAGCTACCCGGATGAACTCTCTGGCGGGATGCGTCAACGTGTGGGATTAGCCCGCGCGTTAGCGATTAATCCGGATATATTATTAATGGACGAAGCCTTCTCGGCGCTCGATCCATTAATTCGCACCGAGATGCAGGATGAGCTGGTAAAATTACAGGCGAAACATCAGCGCACCATTGTCTTTATTTCCCACGATCTTGATGAAGCCATGCGTATTGGCGACCGAATTGCCATTATGCAAAATGGTGAAGTGGTACAGGTCGGCACACCGGATGAAATTCTCAATAATCCGGCGAATGATTATGTCCGTACCTTCTTCCGTGGCGTTGATATTAGTCAGGTATTCAGTGCGAAAGATATTGCCCGCCGGACACCGAATGGCTTAATTCGTAAAACCCCTGGCTTCGGCCCACGTTCGGCACTGAAATTATTGCAGGATGAAGATCGCGAATATGGCTACGTTATCGAACGCGGTAATAAGTTTGTCGGCGCAGTCTCCATCGATTCGCTTAAAACCGCGTTAACGCAGCAGCAAGGTCTTGATGCGGCGCTGATTGATGCGCCGTTAGCAGTCGATGCACAAACGCCTCTTAGCGAGTTGCTCTCTCATGTCGGACAGGCACCCTGTGCGGTGCCCGTGGTCGACGAGGACCAACAGTATGTCGGCATCATTTCGAAAGGAATGCTGCTGCGCGCTTTAGATCGTGAGGGGGTAAATAATGGCTGA", 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"GI:16130592" + ], + [ + "gene_synonym", + "GeneID:947145" + ], + [ + "gene_synonym", + "JW2653" + ], + [ + "gene_synonym", + "NP_417164.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P14176" + ], + [ + "gene_synonym", + "b2678" + ], + [ + "gene_synonym", + "osrA" + ], + [ + "gene_synonym", + "proU" + ], + [ + "gene_synonym", + "proW" + ] + ], + "dna_sequence": 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"dna_sequence_length": 993, + "functions": [ + "glycine betaine/proline ABC transporter periplasmic binding protein", + "cold shock protein" + ], + "id": "CDS_2648", + "location": [ + [ + "NC_000913", + 2807132, + "+", + 993 + ] + ], + "md5": "5f05ea0bc75844202a66eb177b7aff6b", + "parent_gene": "", + "protein_md5": "f88dc9aa701cbe535d01e68eb90355ee", + "protein_translation": "MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQTLLVSRALEKLGYTVNKPSEVDYNVGYTSLASGDATFTAVNWTPLHDNMYEAAGGDKKFYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKDPKIAKLFDTNGDGKADLTGCNPGWGCEGAINHQLAAYELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNELKPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWAEKNPAAAKLFAIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAAQK", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008822" + ], + [ + "gene_synonym", + "ASAP:ABE-0008824" + ], + [ + "gene_synonym", + "ECK2674" + ], + [ + "gene_synonym", + "EcoGene:EG13527" + ], + [ + "gene_synonym", + "GeneID:2847696" + ], + [ + "gene_synonym", + "JW2655" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76628" + ], + [ + "gene_synonym", + "b2681" + ], + [ + "gene_synonym", + "ygaX" + ], + [ + "gene_synonym", + "ygaY" + ] + ], + "dna_sequence": 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"pleiotropic regulatory protein for carbon source metabolism" + ], + "id": "CDS_2659", + "location": [ + [ + "NC_000913", + 2819146, + "-", + 186 + ] + ], + "md5": "575957ef32f45516e642e916f081e8bb", + "parent_gene": "", + "protein_md5": "fc4f077eb268a92f29017fcaaedd8fa3", + "protein_translation": "MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEKSQQSSY", + "protein_translation_length": 61, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008869" + ], + [ + "gene_synonym", + "ECK2692" + ], + [ + "gene_synonym", + "EcoGene:EG10034" + ], + [ + "gene_synonym", + "GI:16130604" + ], + [ + "gene_synonym", + "GeneID:947175" + ], + [ + "gene_synonym", + "JW2667" + ], + [ + "gene_synonym", + "NP_417177.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00957" + ], + [ + "gene_synonym", + "act" + ], + [ + "gene_synonym", + "ala-act" + ], + [ + "gene_synonym", + "alaS" + ], + [ + "gene_synonym", + "b2697" + ], + [ + "gene_synonym", + "lovB" + ] + ], + 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"gene_synonym", + "ECK2705" + ], + [ + "gene_synonym", + "EcoGene:EG12963" + ], + [ + "gene_synonym", + "GI:16130617" + ], + [ + "gene_synonym", + "GeneID:948979" + ], + [ + "gene_synonym", + "JW2680" + ], + [ + "gene_synonym", + "NP_417190.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46877" + ], + [ + "gene_synonym", + "b2710" + ], + [ + "gene_synonym", + "flrd" + ], + [ + "gene_synonym", + "norV" + ], + [ + "gene_synonym", + "ygaI" + ], + [ + "gene_synonym", + "ygaJ" + ], + [ + "gene_synonym", + "ygaK" + ] + ], + "dna_sequence": 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"GI:16130620" + ], + [ + "gene_synonym", + "GeneID:947190" + ], + [ + "gene_synonym", + "JW2683" + ], + [ + "gene_synonym", + "NP_417193.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAK4" + ], + [ + "gene_synonym", + "b2713" + ], + [ + "gene_synonym", + "hydN" + ] + ], + "dna_sequence": "ATGAACCGTTTCATCATTGCTGACGCGAGTAAATGTATTGGTTGCCGTACCTGTGAAGTAGCGTGCGTGGTTTCTCATCAGGAAAATCAGGACTGTGCATCGCTGACCCCGGAAACTTTTTTACCGCGTATCCATGTCATTAAAGGTGTGAACATTTCCACGGCGACAGTTTGCCGTCAGTGTGAAGATGCACCGTGCGCTAACGTCTGCCCGAATGGTGCTATCAGCCGTGATAAAGGGTTTGTTCATGTGATGCAGGAACGTTGCATTGGTTGCAAAACCTGCGTTGTGGCTTGCCCGTATGGTGCGATGGAAGTGGTGGTACGTCCGGTGATCCGCAACAGCGGCGCGGGTCTGAATGTACGGGCTGACAAAGCCGAAGCCAATAAATGCGACCTGTGCAACCATCGTGAAGACGGCCCGGCGTGTATGGCGGCTTGCCCGACTCATGCGCTGATTTGTGTCGATCGTAATAAACTTGAACAACTGAGCGCAGAAAAACGCCGCCGTACGGCGCTGATGTTCTAA", + "dna_sequence_length": 528, + "functions": [ + "formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit" + ], + "id": "CDS_2676", + "location": [ + [ + "NC_000913", + 2838105, + "-", + 528 + ] + ], + "md5": "c05a0119d5aae8f75827861edfda527a", + "parent_gene": "", + "protein_md5": "cc70f09fe5af29105781fd3a8a15181b", + "protein_translation": "MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRIHVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYGAMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKLEQLSAEKRRRTALMF", + "protein_translation_length": 175, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008922" + ], + [ + "gene_synonym", + "ECK2709" + ], + [ + "gene_synonym", + "EcoGene:EG10087" + ], + [ + "gene_synonym", + "GI:345452722" + ], + [ + "gene_synonym", + "GeneID:947305" + ], + [ + "gene_synonym", + "JW5434" + ], + [ + "gene_synonym", + "NP_417194.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24242" + ], + [ + "gene_synonym", + "ascG" + ], + [ + "gene_synonym", + "b2714" + ], + [ + "gene_synonym", + "sac" + ] + ], + "dna_sequence": 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"-", + 471 + ] + ], + "md5": "3f649bc465faa1cac9b16144cb017b67", + "parent_gene": "", + "protein_md5": "7d9566c45bae9820562fb4718b1c11d4", + "protein_translation": "MTDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPENDIVAIRELRPTRLLIVDATDMGLNPGEIRIIDPDDIAEMFMMTTHNMPLNYLIDQLKEDIGEVIFLGIQPDIVGFYYPMTQPIKDAVETVYQRLEGWEGNGGFAQLAVEEE", + "protein_translation_length": 156, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008933" + ], + [ + "gene_synonym", + "ECK2713" + ], + [ + "gene_synonym", + "EcoGene:EG10481" + ], + [ + "gene_synonym", + "GI:16130625" + ], + [ + "gene_synonym", + "GeneID:947438" + ], + [ + "gene_synonym", + "JW2688" + ], + [ + "gene_synonym", + "NP_417198.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEV7" + ], + [ + "gene_synonym", + "b2718" + ], + [ + "gene_synonym", + "hevH" + ], + [ + "gene_synonym", + "hycH" + ] + ], + "dna_sequence": 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[ + "NC_000913", + 2850647, + "+", + 351 + ] + ], + "md5": "4602eb82dc5feec29847772f95fbb9f5", + "parent_gene": "", + "protein_md5": "e0ef488a5fde62cb45115f4e5aaf1c66", + "protein_translation": "MHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSLAFCFDLVCRGSVAEGCKLHLEEQEAECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVADDGLQIRRIEIDQE", + "protein_translation_length": 116, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008960" + ], + [ + "gene_synonym", + "ECK2722" + ], + [ + "gene_synonym", + "EcoGene:EG10484" + ], + [ + "gene_synonym", + "GI:16130634" + ], + [ + "gene_synonym", + "GeneID:947194" + ], + [ + "gene_synonym", + "JW2697" + ], + [ + "gene_synonym", + "NP_417207.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAN3" + ], + [ + "gene_synonym", + "b2727" + ], + [ + "gene_synonym", + "hydB" + ], + [ + "gene_synonym", + "hydE" + ], + [ + "gene_synonym", + "hypB" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW2701" + ], + [ + "gene_synonym", + "NP_417211.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P19323" + ], + [ + "gene_synonym", + "b2731" + ], + [ + "gene_synonym", + "fhl" + ], + [ + "gene_synonym", + "fhlA" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW2702" + ], + [ + "gene_synonym", + "NP_417212.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25728" + ], + [ + "gene_synonym", + "b2732" + ], + [ + "gene_synonym", + "ygbA" + ] + ], + "dna_sequence": "ATGTCCGGCAAGCGTATCTCTCGTGAAAAACTGACGATTAAAAAAATGATCGATCTTTATCAAGCGAAATGCCCGCAGGCGTCAGCGGAGCCGGAGCATTACGAGGCGTTGTTTGTTTACGCGCAAAAGCGGCTGGATAAATGTGTGTTCGGCGAAGAGAAACCAGCCTGTAAGCAGTGTCCGGTGCACTGTTACCAGCCTGCAAAGCGTGAAGAGATGAAACAGATTATGCGTTGGGCCGGGCCGAGAATGCTGTGGCGTCATCCGATCTTAACCGTGCGTCATCTCATCGATGACAAGCGTCCGGTGCCAGAACTGCCGGAAAAATATCGTCCGAAAAAACCTCATGAATAG", + "dna_sequence_length": 354, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2695", + "location": [ + [ + "NC_000913", + 2856806, + "-", + 354 + ] + ], + "md5": "4746835f93272fed092fadc532968c6f", + "parent_gene": "", + "protein_md5": "687d7a57c0c238a46191b6eef0d1f544", + "protein_translation": "MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKRLDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRPVPELPEKYRPKKPHE", + "protein_translation_length": 117, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0008977" + ], + [ + "gene_synonym", + "ECK2728" + ], + [ + "gene_synonym", + "EcoGene:EG10625" + ], + [ + "gene_synonym", + "GI:16130640" + ], + [ + "gene_synonym", + "GeneID:947206" + ], + [ + "gene_synonym", + "JW2703" + ], + [ + "gene_synonym", + "NP_417213.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23909" + ], + [ + "gene_synonym", + "ant" + ], + [ + "gene_synonym", + "b2733" + ], + [ + "gene_synonym", + "fdv" + ], + [ + "gene_synonym", + "mutS" + ], + [ + "gene_synonym", + "plm" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK2756" + ], + [ + "gene_synonym", + "EcoGene:EG12634" + ], + [ + "gene_synonym", + "GI:16130668" + ], + [ + "gene_synonym", + "GeneID:947229" + ], + [ + "gene_synonym", + "JW2731" + ], + [ + "gene_synonym", + "NP_417241.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38036" + ], + [ + "gene_synonym", + "b2761" + ], + [ + "gene_synonym", + "cas3" + ], + [ + "gene_synonym", + "ygcB" + ] + ], + "dna_sequence": 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"MEPFKYICHYWGKSSKSLTKGNDIHLLIYHCLDVAAVADCWWDQSVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLNGPSTQMCRKFNHGAAGLYWFNQDSLSEQSLGDFFSFFDAAPHPYESWFPWVEAVTGHHGFILHSQDQDKSRWEMPASLASYAAQDKQAREEWISVLEALFLTPAGLSINDIPPDCSSLLAGFCSLADWLGSWTTTNTFLFNEDAPSDINALRTYFQDRQQDASRVLELSGLVSNKRCYEGVHALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENNSAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPICLADMLPDLTMLERMIAAANAGAQVCLICNLVDVAQVCYQRLKELNNTQVDIDLFHARFTLNDRREKENRVISNFGKNGKRNVGRILVATQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHHRKYRPAGFEIPVATILLPDGEGYGRHEHIYSNVRVMWRTQQHIEELNGASLFFPDAYRQWLDSIYDDAEMDEPEWVGNGMDKFESAECEKRFKARKVLQWAEEYSLQDNDETILAVTRDGEMSLPLLPYVQTSSGKQLLDGQVYEDLSHEQQYEALALNRVNVPFTWKRSFSEVVDEDGLLWLEGKQNLDGWVWQGNSIVITYTGDEGMTRVIPANPK", + "protein_translation_length": 888, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009057" + ], + [ + "gene_synonym", + "ECK2757" + ], + [ + "gene_synonym", + "EcoGene:EG10189" + ], + [ + "gene_synonym", + "GI:16130669" + ], + [ + "gene_synonym", + "GeneID:947230" + ], + [ + "gene_synonym", + "JW2732" + ], + [ + "gene_synonym", + "NP_417242.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17854" + ], + [ + "gene_synonym", + "b2762" + ], + [ + "gene_synonym", + "cysH" + ] + ], + "dna_sequence": "ATGTCCAAACTCGATCTAAACGCCCTGAACGAACTGCCGAAGGTAGATCGCATTCTGGCGCTGGCGGAAACTAACGCCGAACTGGAAAAACTGGACGCTGAAGGCCGCGTAGCCTGGGCGCTGGATAATCTGCCCGGTGAATATGTACTTTCTTCCAGCTTTGGCATTCAGGCGGCGGTGAGCCTGCATCTGGTGAATCAAATTCGCCCGGATATTCCGGTGATCCTCACCGATACGGGTTACTTGTTCCCGGAAACCTACCGCTTTATTGACGAGTTAACGGACAAACTCAAGCTCAACCTGAAAGTGTACCGTGCTACCGAAAGCGCAGCCTGGCAGGAAGCACGCTACGGAAAACTGTGGGAGCAGGGCGTTGAAGGCATTGAAAAGTACAATGACATCAACAAAGTCGAACCGATGAACCGGGCTCTGAAAGAACTGAATGCGCAAACCTGGTTTGCTGGCCTGCGCCGTGAACAATCCGGCAGTCGTGCCAATTTACCGGTGCTGGCAATTCAGCGTGGCGTATTTAAAGTGCTGCCGATTATCGACTGGGATAACCGAACTATTTATCAGTACCTGCAAAAACATGGCCTGAAATATCACCCATTATGGGATGAAGGATATTTATCGGTGGGCGATACCCATACAACCCGTAAATGGGAACCCGGCATGGCGGAAGAAGAAACGCGTTTCTTTGGCTTAAAAAGGGAATGTGGGTTACACGAAGGGTAA", + "dna_sequence_length": 735, + "functions": [ + "phosphoadenosine phosphosulfate reductase", + "PAPS reductase, thioredoxin dependent" + ], + "id": "CDS_2725", + "location": [ + [ + "NC_000913", + 2888312, + "-", + 735 + ] + ], + "md5": "9cc9595e0a15607bc6a7f6672862bc4a", + "parent_gene": "", + "protein_md5": "3133b183438b1574006ba1d1d4458b3e", + "protein_translation": "MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG", + "protein_translation_length": 244, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009061" + ], + [ + "gene_synonym", + "ECK2758" + ], + [ + "gene_synonym", + "EcoGene:EG10190" + ], + [ + "gene_synonym", + "GI:16130670" + ], + [ + "gene_synonym", + "GeneID:947231" + ], + [ + "gene_synonym", + "JW2733" + ], + [ + "gene_synonym", + "NP_417243.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P17846" + ], + [ + "gene_synonym", + "b2763" + ], + [ + "gene_synonym", + "cysI" + ] + ], + "dna_sequence": "ATGAGCGAAAAACATCCAGGGCCTTTAGTGGTCGAAGGAAAACTGACAGACGCCGAGCGCATGAAGCATGAAAGCAACTACCTGCGCGGCACCATTGCGGAAGATTTAAACGACGGTCTGACCGGCGGCTTTAAGGGCGACAACTTCCTGCTGATTCGCTTCCACGGCATGTATCAGCAGGATGACCGCGACATCCGCGCCGAACGTGCTGAACAGAAGCTGGAGCCGCGCCACGCGATGCTGCTTCGCTGTCGTCTGCCGGGTGGGGTGATTACCACTAAACAGTGGCAGGCGATCGACAAATTTGCCGGTGAAAACACCATCTATGGCAGCATTCGCCTGACCAACCGCCAGACGTTTCAGTTCCACGGCATTCTGAAAAAGAACGTCAAACCGGTGCACCAGATGCTGCACTCGGTCGGTCTTGATGCGCTGGCGACAGCTAACGACATGAACCGTAACGTACTCTGCACCTCGAACCCTTACGAGTCGCAGCTGCACGCGGAAGCGTACGAGTGGGCGAAGAAGATTTCTGAGCATCTGTTGCCTCGTACCCGCGCGTATGCGGAGATCTGGCTCGACCAGGAAAAAGTCGCCACTACTGATGAAGAACCGATCCTCGGCCAGACCTACCTGCCGCGTAAATTCAAAACCACGGTAGTGATCCCGCCACAGAACGATATCGATCTGCACGCCAACGACATGAACTTCGTGGCGATCGCCGAAAACGGCAAGCTGGTGGGCTTTAACCTGTTGGTGGGCGGTGGGCTTTCCATCGAACACGGCAACAAGAAAACCTACGCCCGCACCGCGAGTGAGTTTGGCTATCTGCCGCTGGAGCATACGCTGGCGGTGGCCGAAGCCGTCGTGACAACTCAGCGTGACTGGGGTAACCGAACCGATCGTAAAAATGCCAAAACCAAATACACGCTGGAGCGCGTGGGGGTTGAGACGTTTAAAGCGGAAGTGGAGCGTCGCGCGGGGATCAAATTTGAACCGATCCGTCCATATGAGTTCACCGGACGAGGCGATCGTATTGGCTGGGTTAAGGGCATTGATGATAACTGGCACCTGACGCTGTTTATCGAAAATGGTCGCATCCTTGATTATCCGGCGCGTCCGCTGAAAACCGGCCTGCTGGAGATCGCGAAGATCCACAAAGGCGATTTCCGCATTACGGCGAACCAGAATCTGATCATCGCCGGTGTACCGGAAAGCGAGAAAGCGAAGATCGAGAAGATCGCCAAAGAGAGCGGGTTAATGAATGCCGTCACGCCGCAGCGTGAAAACTCGATGGCTTGCGTGTCATTCCCGACTTGCCCGCTGGCGATGGCGGAAGCAGAGCGTTTCCTGCCGTCTTTTATCGACAACATCGATAATTTAATGGCGAAACATGGTGTCAGCGATGAGCATATCGTGATGCGTGTAACAGGCTGCCCGAACGGTTGTGGTCGCGCGATGCTGGCGGAAGTGGGCCTGGTGGGTAAAGCGCCGGGTCGCTACAACCTGCATCTTGGCGGCAACCGCATTGGGACACGTATCCCACGGATGTATAAAGAAAACATCACCGAGCCGGAAATCCTGGCGTCGCTTGATGAACTGATAGGGCGCTGGGCGAAAGAGCGCGAAGCGGGTGAAGGCTTCGGCGACTTTACGGTGCGTGCGGGCATCATTCGCCCGGTGCTCGATCCGGCGCGTGATTTGTGGGATTAA", 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"EcoGene:EG10571" + ], + [ + "gene_synonym", + "GI:16130690" + ], + [ + "gene_synonym", + "GeneID:947245" + ], + [ + "gene_synonym", + "JW2754" + ], + [ + "gene_synonym", + "NP_417263.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE72" + ], + [ + "gene_synonym", + "b2783" + ], + [ + "gene_synonym", + "chpAI" + ], + [ + "gene_synonym", + "chpR" + ], + [ + "gene_synonym", + "mazE" + ], + [ + "gene_synonym", + "tasA" + ] + ], + "dna_sequence": "ATGATCCACAGTAGCGTAAAGCGTTGGGGAAATTCACCGGCGGTGCGGATCCCGGCTACGTTAATGCAGGCGCTCAATCTGAATATTGATGATGAAGTGAAGATTGACCTGGTGGATGGCAAATTAATTATTGAGCCAGTGCGTAAAGAGCCCGTATTTACGCTTGCTGAACTGGTCAACGACATCACGCCGGAAAACCTCCACGAGAATATCGACTGGGGAGAGCCGAAAGATAAGGAAGTCTGGTAA", + "dna_sequence_length": 249, + "functions": [ + "antitoxin of the ChpA-ChpR toxin-antitoxin system" + ], + "id": "CDS_2746", + "location": [ + [ + "NC_000913", + 2911339, + "-", + 249 + ] + ], + "md5": "a941eb889371d9849b0f4d65413feaeb", + "parent_gene": "", + "protein_md5": 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"gene_synonym", + "GI:16130693" + ], + [ + "gene_synonym", + "GeneID:947255" + ], + [ + "gene_synonym", + "JW2757" + ], + [ + "gene_synonym", + "NP_417266.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEC5" + ], + [ + "gene_synonym", + "airS" + ], + [ + "gene_synonym", + "b2786" + ], + [ + "gene_synonym", + "barA" + ], + [ + "gene_synonym", + "gacC" + ] + ], + "dna_sequence": 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"b2801" + ], + [ + "gene_synonym", + "fucP" + ] + ], + "dna_sequence": 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"GI:16130709" + ], + [ + "gene_synonym", + "GeneID:946195" + ], + [ + "gene_synonym", + "JW2773" + ], + [ + "gene_synonym", + "NP_417282.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69922" + ], + [ + "gene_synonym", + "b2802" + ], + [ + "gene_synonym", + "fucI" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0009191" + ], + [ + "gene_synonym", + "ECK2798" + ], + [ + "gene_synonym", + "EcoGene:EG10350" + ], + [ + "gene_synonym", + "GI:674842733" + ], + [ + "gene_synonym", + "GeneID:946022" + ], + [ + "gene_synonym", + "JW2774" + ], + [ + "gene_synonym", + "NP_417283.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11553" + ], + [ + "gene_synonym", + "b2803" + ], + [ + "gene_synonym", + "fucK" + ] + ], + "dna_sequence": 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2945842, + "-", + 807 + ] + ], + "md5": "fcae45b6217b1169fc70e0ba7b800974", + "parent_gene": "", + "protein_md5": "32cd920929ed503e35d0911bc3b6f973", + "protein_translation": "MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMSVGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGTVCAMKATAEGPKRMDCASGFGAATMVTATFGFVAVSHALKKMMAKAARQG", + "protein_translation_length": 268, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009228" + ], + [ + "gene_synonym", + "ECK2809" + ], + [ + "gene_synonym", + "EcoGene:EG13085" + ], + [ + "gene_synonym", + "GI:16130720" + ], + [ + "gene_synonym", + "GeneID:944964" + ], + [ + "gene_synonym", + "JW2784" + ], + [ + "gene_synonym", + "NP_417293.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A935" + ], + [ + "gene_synonym", + "b2813" + ], + [ + "gene_synonym", + "mlt" + ], + [ + "gene_synonym", + "mltA" + ], + [ + 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}, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009249" + ], + [ + "gene_synonym", + "ECK2816" + ], + [ + "gene_synonym", + "EcoGene:EG10824" + ], + [ + "gene_synonym", + "GI:16130724" + ], + [ + "gene_synonym", + "GeneID:947286" + ], + [ + "gene_synonym", + "JW2788" + ], + [ + "gene_synonym", + "NP_417297.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08394" + ], + [ + "gene_synonym", + "b2820" + ], + [ + "gene_synonym", + "ior" + ], + [ + "gene_synonym", + "recB" + ], + [ + "gene_synonym", + "rorA" + ] + ], + "dna_sequence": "ATGAGTGATGTCGCCGAGACACTAGATCCTTTGCGCTTGCCCTTACAGGGTGAGCGCCTGATTGAAGCCTCTGCCGGCACAGGCAAAACCTTTACGATTGCGGCGCTCTATTTGCGCCTGTTACTTGGACTAGGCGGTTCCGCCGCCTTTCCCCGCCCGCTGACCGTTGAAGAACTGCTGGTGGTCACCTTTACCGAGGCTGCCACGGCAGAATTGCGCGGTCGTATCCGTAGCAATATCCACGAGTTGCGCATCGCCTGTCTGCGTGAAACCACCGACAATCCACTGTACGAACGCCTGCTGGAAGAGATCGACGATAAAGCGCAAGCCGCGCAGTGGTTGTTGTTAGCCGAACGGCAGATGGATGAAGCGGCAGTCTTTACTATTCACGGCTTTTGCCAGCGCATGCTCAACCTGAATGCCTTTGAATCCGGCATGCTGTTTGAGCAGCAGCTGATTGAAGATGAGTCTCTGCTACGCTACCAGGCCTGCGCCGATTTCTGGCGTCGCCACTGCTACCCGCTGCCGCGTGAAATAGCCCAGGTCGTCTTTGAAACCTGGAAAGGGCCGCAGGCGTTGCTGCGCGATATTAATCGTTATCTGCAAGGCGAAGCGCCGGTTATCAAAGCACCGCCGCCCGATGATGAAACGCTGGCTTCCCGTCACGCGCAAATTGTGGCGCGTATTGATACGGTAAAACAGCAGTGGCGCGACGCAGTGGGTGAACTGGATGCGCTGATCGAATCTTCTGGTATTGATCGACGCAAGTTTAACCGTAGCAATCAGGCTAAATGGATCGACAAGATCAGCGCCTGGGCAGAAGAAGAGACAAACAGTTATCAGTTGCCGGAGTCGCTGGAAAAATTCTCCCAGCGTTTCTTAGAAGATCGCACGAAGGCCGGGGGGGAAACCCCGCGACATCCACTGTTTGAGGCGATCGATCAACTGCTTGCAGAACCATTGTCGATCCGCGATCTGGTGATCACCCGCGCATTGGCTGAGATCCGCGAAACAGTAGCGCGTGAAAAACGCCGCCGTGGCGAATTGGGTTTTGATGACATGTTAAGTCGGCTCGATTCCGCGCTGCGTAGCGAAAGCGGTGAGGTGTTGGCAGCGGCGATCCGTACGCGATTCCCGGTGGCAATGATCGATGAATTTCAGGATACCGACCCCCAGCAGTACCGAATTTTTCGCCGTATCTGGCACCATCAGCCGGAAACCGCATTGTTGCTAATTGGCGACCCGAAGCAGGCCATATATGCATTCCGGGGTGCGGATATCTTCACTTATATGAAGGCGCGTAGCGAAGTTCACGCCCACTACACTTTAGACACCAACTGGCGTTCCGCACCAGGAATGGTGAACAGCGTGAATAAGCTTTTCAGCCAGACTGATGACGCGTTCATGTTTCGCGAAATACCGTTTATTCCAGTGAAATCAGCCGGGAAAAATCAGGCGTTACGTTTTGTATTTAAAGGTGAAACACAGCCTGCGATGAAAATGTGGCTGATGGAAGGCGAAAGCTGCGGCGTTGGCGATTATCAAAGTACCATGGCGCAGGTATGTGCTGCGCAAATCCGCGACTGGCTACAAGCCGGACAGCGGGGCGAAGCGTTGCTGATGAACGGCGACGACGCGCGTCCGGTGCGTGCTTCGGACATCAGTGTGCTGGTGCGCAGCCGCCAGGAGGCCGCCCAGGTGCGCGATGCCTTAACGTTGCTGGAAATCCCTTCCGTTTACCTTTCGAACCGCGACAGTGTTTTTGAAACTCTGGAAGCGCAGGAAATGCTTTGGTTGTTGCAGGCGGTGATGACGCCCGAACGTGAGAACACCCTGCGTAGTGCGCTGGCAACGTCAATGATGGGGCTGAACGCGCTGGATATCGAAACGCTGAACAATGACGAACATGCGTGGGATGTGGTAGTCGAAGAGTTCGATGGTTATCGGCAAATCTGGCGCAAACGTGGCGTTATGCCGATGCTGCGGGCGCTGATGTCGGCGCGTAACATTGCTGAAAACTTGCTGGCAACGGCAGGCGGTGAGCGGCGTCTTACCGATATCTTGCATATCAGCGAACTGCTACAAGAAGCCGGAACGCAGCTGGAAAGTGAACATGCGCTGGTACGCTGGTTATCGCAACATATCCTCGAGCCAGACAGTAATGCCTCCAGCCAACAAATGCGTCTCGAAAGTGATAAACATCTGGTGCAGATTGTCACGATCCACAAATCGAAAGGGCTGGAATATCCATTGGTCTGGCTGCCGTTTATCACCAATTTCCGCGTCCAGGAGCAGGCGTTTTATCACGATCGCCACTCGTTTGAGGCAGTTCTGGATCTTAATGCTGCGCCAGAAAGCGTCGACCTCGCGGAGGCCGAACGTCTGGCGGAAGATCTGCGTTTGCTTTACGTGGCGCTGACACGTTCGGTTTGGCATTGCAGTCTCGGCGTTGCACCGCTGGTGCGCCGTCGTGGCGATAAAAAAGGTGACACCGACGTCCACCAAAGTGCGCTCGGGCGTTTGCTGCAAAAAGGGGAACCGCAAGATGCGGCAGGGCTTCGCACCTGTATTGAAGCGTTATGCGATGATGATATTGCCTGGCAAACGGCACAAACTGGTGATAACCAACCCTGGCAGGTTAATGATGTTTCTACAGCAGAGCTGAATGCGAAGACGTTACAACGATTGCCCGGCGATAACTGGCGCGTCACCAGCTACTCTGGTTTGCAACAGCGTGGTCACGGTATCGCCCAGGATTTGATGCCTCGGCTGGATGTCGATGCTGCAGGCGTTGCCAGCGTCGTTGAAGAACCGACGTTAACACCACATCAGTTTCCGCGCGGTGCGTCACCGGGGACGTTCTTGCACAGTTTGTTTGAAGACCTGGATTTTACCCAGCCGGTTGACCCGAACTGGGTGCGGGAAAAACTGGAACTCGGCGGCTTTGAATCGCAGTGGGAACCGGTATTGACCGAGTGGATCACGGCTGTCCTCCAGGCACCTCTCAATGAAACCGGCGTAAGCCTGAGTCAACTTTCCGCCCGCAATAAACAGGTGGAGATGGAGTTTTATCTGCCGATTAGTGAACCGCTTATCGCCAGTCAGCTTGATACGTTAATCCGCCAGTTTGACCCGCTATCCGCAGGCTGCCCGCCGCTGGAGTTCATGCAGGTACGTGGCATGTTAAAAGGCTTTATCGACCTGGTGTTCCGCCACGAAGGGCGTTATTACCTGCTCGACTATAAATCCAACTGGTTGGGTGAAGACAGTTCGGCTTACACCCAACAGGCTATGGCAGCGGCAATGCAGGCACACCGCTATGATCTGCAATATCAGCTTTATACCCTGGCGCTGCATCGTTATCTGCGCCATCGCATTGCTGATTACGACTATGAGCACCACTTTGGCGGCGTTATTTATCTGTTCCTGCGTGGCGTTGATAAAGAACATCCGCAACAGGGGATTTACACAACCCGACCCAACGCCGGGTTGATTGCCCTGATGGATGAGATGTTTGCCGGTATGACCCTGGAGGAGGCGTAA", + "dna_sequence_length": 3543, + "functions": [ + "exonuclease V (RecBCD complex), beta subunit" + ], + "id": "CDS_2780", + "location": [ + [ + "NC_000913", + 2956003, + "-", + 3543 + ] + ], + "md5": "cb4ca10cee7cc364b064f02b47e875af", + "parent_gene": "", + "protein_md5": "0056f083a72f8d0989b4e00704f0bfa9", + "protein_translation": "MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLEEIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETLASRHAQIVARIDTVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIDKISAWAEEETNSYQLPESLEKFSQRFLEDRTKAGGETPRHPLFEAIDQLLAEPLSIRDLVITRALAEIRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDVVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTCIEALCDDDIAWQTAQTGDNQPWQVNDVSTAELNAKTLQRLPGDNWRVTSYSGLQQRGHGIAQDLMPRLDVDAAGVASVVEEPTLTPHQFPRGASPGTFLHSLFEDLDFTQPVDPNWVREKLELGGFESQWEPVLTEWITAVLQAPLNETGVSLSQLSARNKQVEMEFYLPISEPLIASQLDTLIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGEDSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYEHHFGGVIYLFLRGVDKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA", + "protein_translation_length": 1180, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009252" + ], + [ + "gene_synonym", + "ECK2817" + ], + [ + "gene_synonym", + "EcoGene:EG10786" + ], + [ + "gene_synonym", + "GI:16130725" + ], + [ + "gene_synonym", + "GeneID:947284" + ], + [ + "gene_synonym", + "JW2789" + ], + [ + "gene_synonym", + "NP_417298.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05458" + ], + [ + "gene_synonym", + "b2821" + ], + [ + "gene_synonym", + "ptr" + ], + [ + "gene_synonym", + "ptrA" + ] + ], + "dna_sequence": "ATGCCCCGCAGCACCTGGTTCAAAGCATTATTGTTGTTAGTTGCCCTTTGGGCACCCTTAAGTCAGGCAGAAACGGGATGGCAGCCGATTCAGGAAACCATCCGTAAAAGTGATAAAGATAACCGCCAGTATCAGGCTATACGTCTGGATAACGGTATGGTGGTCTTGCTGGTTTCTGATCCGCAGGCAGTTAAATCGCTCTCGGCGCTGGTGGTGCCCGTTGGGTCGCTGGAAGATCCCGAGGCGTACCAGGGGCTGGCACATTACCTTGAACATATGAGTCTGATGGGGTCGAAAAAGTACCCGCAGGCTGACAGTCTGGCCGAATATCTCAAAATGCACGGCGGTAGTCACAATGCCAGCACTGCGCCGTATCGCACGGCTTTCTATCTGGAAGTTGAGAACGACGCCTTGCCTGGTGCGGTAGACCGCCTGGCCGATGCTATTGCTGAACCTTTGCTCGACAAGAAATATGCCGAACGTGAGCGTAATGCGGTGAACGCTGAATTAACCATGGCGCGTACGCGTGACGGGATGCGCATGGCACAGGTCAGCGCAGAAACCATTAACCCGGCACACCCCGGTTCAAAGTTTTCTGGTGGTAACCTCGAAACTTTAAGCGACAAACCTGGTAATCCGGTGCAGCAGGCGCTGAAAGATTTCCACGAGAAGTACTATTCCGCCAATTTGATGAAGGCGGTTATTTACAGTAATAAACCGCTGCCGGAGTTGGCAAAAATGGCGGCGGACACCTTTGGTCGCGTGCCGAACAAAGAGAGCAAAAAACCGGAAATCACCGTGCCGGTAGTCACCGACGCGCAAAAGGGCATTATCATTCATTACGTCCCTGCGCTGCCGCGTAAAGTGTTGCGCGTTGAGTTTCGCATCGATAACAACTCAGCGAAGTTCCGTAGTAAAACCGATGAATTGATTACCTATCTGATTGGCAATCGCAGCCCAGGTACACTTTCTGACTGGCTGCAAAAGCAGGGATTAGTTGAGGGCATTAGCGCCAACTCCGATCCTATCGTCAACGGCAACAGCGGCGTATTAGCGATCTCTGCGTCTTTAACCGATAAAGGCCTGGCTAATCGCGATCAGGTTGTGGCGGCAATTTTTAGCTATCTCAATCTGTTACGTGAAAAAGGCATTGATAAACAATACTTCGATGAACTGGCGAATGTGCTGGATATCGACTTCCGTTATCCGTCGATCACCCGTGATATGGATTACGTCGAATGGCTGGCAGATACCATGATTCGCGTTCCTGTTGAGCATACGCTGGATGCAGTCAATATTGCCGATCGGTACGATGCTAAAGCAGTAAAGGAACGTCTGGCGATGATGACGCCGCAGAATGCGCGTATCTGGTATATCAGCCCGAAAGAGCCGCACAACAAAACGGCTTACTTTGTCGATGCGCCGTATCAGGTCGATAAAATCAGCGCACAAACTTTCGCCGACTGGCAGAAAAAAGCCGCCGACATTGCGCTCTCTTTGCCAGAGCTTAACCCTTATATTCCTGATGATTTCTCGCTGATTAAGTCAGAGAAGAAATACGACCATCCAGAGCTGATTGTTGATGAGTCGAATCTGCGCGTGGTGTATGCGCCAAGCCGTTATTTTGCCAGCGAGCCCAAAGCTGATGTCAGCCTGATTTTGCGTAATCCGAAAGCCATGGACAGCGCCCGCAATCAGGTGATGTTTGCGCTCAATGATTATCTCGCAGGGCTGGCGCTTGATCAGTTAAGCAACCAGGCGTCGGTTGGTGGCATAAGTTTTTCCACCAACGCTAACAACGGCCTTATGGTTAATGCTAATGGTTACACCCAGCGTCTGCCGCAGCTGTTCCAGGCATTGCTCGAGGGGTACTTTAGCTATACCGCTACGGAAGATCAGCTTGAGCAGGCGAAGTCCTGGTATAACCAGATGATGGATTCCGCAGAAAAGGGTAAAGCGTTTGAGCAGGCGATTATGCCCGCGCAGATGCTCTCGCAAGTGCCGTACTTCTCGCGAGATGAACGGCGTAAAATTTTGCCCTCCATTACGTTGAAAGAGGTGCTGGCCTATCGCGACGCCTTAAAATCAGGGGCTCGACCAGAGTTTATGGTTATCGGCAACATGACCGAGGCCCAGGCAACAACGCTGGCACGCGATGTGCAAAAACAGTTGGGCGCTGATGGTTCAGAGTGGTGTCGAAACAAAGATGTAGTGGTCGATAAAAAACAATCCGTCATCTTTGAAAAAGCCGGTAACAGCACCGACTCCGCACTGGCAGCGGTATTTGTACCGACTGGCTACGATGAATACACCAGCTCAGCCTATAGCTCTCTGTTGGGGCAGATCGTACAGCCGTGGTTCTACAATCAGTTGCGTACCGAAGAACAATTGGGCTATGCCGTGTTTGCGTTTCCAATGAGCGTGGGGCGTCAGTGGGGCATGGGCTTCCTTTTGCAAAGCAATGATAAACAGCCTTCATTCTTGTGGGAGCGTTACAAGGCGTTTTTCCCAACCGCAGAGGCAAAATTGCGAGCGATGAAGCCAGATGAGTTTGCGCAAATCCAGCAGGCGGTAATTACCCAGATGCTGCAGGCACCGCAAACGCTCGGCGAAGAAGCATCGAAGTTAAGTAAAGATTTCGATCGCGGCAATATGCGCTTCGATTCGCGTGATAAAATCGTGGCCCAGATAAAACTGCTGACGCCGCAAAAACTTGCTGATTTCTTCCATCAGGCGGTGGTCGAGCCGCAAGGCATGGCTATTCTGTCGCAGATTTCCGGCAGCCAGAACGGGAAAGCCGAATATGTACACCCTGAAGGCTGGAAAGTGTGGGAGAACGTCAGCGCGTTGCAGCAAACAATGCCCCTGATGAGTGAAAAGAATGAGTGA", + "dna_sequence_length": 2889, + "functions": [ + "protease III" + ], + "id": "CDS_2781", + "location": [ + [ + "NC_000913", + 2958884, + "-", + 2889 + ] + ], + "md5": "e20c28761a88f41e9abdbca4f0b3b9ca", + "parent_gene": "", + "protein_md5": "9617c6dfd595a41a4f9436331fa5191f", + "protein_translation": "MPRSTWFKALLLLVALWAPLSQAETGWQPIQETIRKSDKDNRQYQAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKGIIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEPHNKTAYFVDAPYQVDKISAQTFADWQKKAADIALSLPELNPYIPDDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFASEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEWCRNKDVVVDKKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVVEPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEKNE", + "protein_translation_length": 962, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009255" + ], + [ + "gene_synonym", + "ECK2818" + ], + [ + "gene_synonym", + "EcoGene:EG10825" + ], + [ + "gene_synonym", + "GI:16130726" + ], + [ + "gene_synonym", + "GeneID:947294" + ], + [ + "gene_synonym", + "JW2790" + ], + [ + "gene_synonym", + "NP_417299.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07648" + ], + [ + "gene_synonym", + "b2822" + ], + [ + "gene_synonym", + "recC" + ] + ], + "dna_sequence": "ATGTTAAGGGTCTACCATTCCAATCGTCTGGACGTGCTGGAAGCGTTGATGGAGTTTATTGTCGAACGCGAACGGCTGGACGATCCTTTCGAACCAGAGATGATTCTGGTGCAAAGTACCGGTATGGCACAGTGGCTGCAAATGACCCTGTCGCAAAAGTTTGGTATTGCGGCAAACATTGATTTTCCGCTGCCAGCGAGCTTTATCTGGGATATGTTCGTCCGGGTGTTACCGGAAATCCCCAAAGAGAGCGCCTTTAACAAACAGAGCATGAGCTGGAAACTGATGACTCTGCTGCCGCAATTGCTGGAGCGCGAAGACTTTACCCTGTTGCGGCATTATCTGACTGACGATAGCGACAAGCGAAAACTGTTCCAGCTTTCCTCAAAAGCGGCGGACCTGTTTGACCAGTATCTGGTCTATCGTCCGGACTGGCTGGCACAGTGGGAAACAGGACATTTGGTTGAAGGGCTGGGAGAAGCACAGGCCTGGCAAGCCCCGTTGTGGAAGGCGCTGGTGGAATATACCCATCAACTCGGGCAACCGCGCTGGCACCGCGCCAATCTCTATCAGCGCTTTATCGAAACGCTGGAGTCCGCGACGACCTGCCCGCCGGGGTTACCTTCGCGCGTCTTTATATGCGGTATTTCCGCGTTACCGCCTGTTTATCTCCAGGCGCTACAGGCGCTGGGTAAACATATTGAAATCCATCTCCTGTTTACCAACCCCTGCCGTTATTACTGGGGCGATATTAAAGATCCTGCTTATCTGGCGAAACTGCTGACCCGTCAGCGTCGACACAGTTTTGAAGATCGCGAATTGCCGCTATTTCGTGATAGCGAAAATGCCGGGCAGCTCTTTAACAGCGATGGTGAACAGGATGTCGGCAACCCGCTGCTGGCTTCATGGGGTAAGCTTGGGCGCGACTACATTTATCTCCTTTCTGACCTGGAGAGCAGCCAGGAGCTGGACGCCTTTGTCGATGTCACGCCAGATAACCTGCTGCATAACATTCAGTCTGACATTCTGGAACTGGAAAACCGCGCCGTTGCTGGTGTGAACATCGAAGAGTTTTCCCGTAGCGATAACAAACGCCCGCTTGATCCACTGGATAGCAGTATCACCTTCCACGTTTGCCATAGCCCGCAGCGTGAAGTTGAAGTTTTACACGATCGCCTGCTGGCGATGCTGGAGGAAGACCCGACACTTACTCCGCGCGACATCATCGTGATGGTGGCTGATATCGACAGCTACAGTCCGTTTATTCAGGCTGTGTTTGGTAGCGCACCTGCGGATCGTTACCTACCTTACGCCATTTCCGACCGTCGTGCGCGGCAGTCACATCCGGTACTGGAAGCGTTTATCAGCCTGTTATCACTGCCTGACAGTCGTTTTGTGTCAGAGGATGTGCTGGCGTTGCTGGATGTGCCGGTGCTGGCGGCGCGGTTTGACATCACCGAAGAAGGGCTGCGTTATTTACGCCAGTGGGTCAACGAATCCGGCATTCGTTGGGGCATAGATGACGACAACGTTCGCGAGCTGGAACTCCCCGCCACCGGACAACACACCTGGCGATTTGGCCTGACGCGTATGTTGTTGGGCTACGCGATGGAGAGCGCGCAGGGCGAGTGGCAATCGGTTCTACCTTATGATGAATCGAGCGGCTTAATTGCAGAACTGGTGGGGCATCTGGCTTCACTGCTAATGCAGCTAAACATCTGGCGTCGCGGGCTGGCACAGGAGCGTCCGCTGGAAGAGTGGTTGCCGGTTTGTCGCGATATGCTCAACGCCTTCTTCCTGCCGGATGCGGAAACCGAAGCGGCGATGACGCTGATCGAACAACAATGGCAGGCGATTATCGCCGAAGGTTTAGGTGCGCAGTATGGCGACGCGGTGCCGCTGTCACTATTGCGTGATGAACTGGCACAGCGTCTGGATCAAGAACGTATCAGCCAGCGTTTTCTCGCCGGACCGGTTAACATTTGTACTCTGATGCCAATGCGTTCAATTCCGTTCAAAGTGGTTTGCCTGCTGGGAATGAACGACGGCGTTTATCCACGTCAGCTTGCGCCATTGGGCTTTGACCTGATGAGCCAGAAACCGAAGCGTGGCGACCGTAGCCGTCGCGATGACGACCGCTATCTGTTCCTGGAAGCGTTAATTTCCGCGCAGCAAAAACTCTATATCAGCTATATCGGTCGTTCCATTCAGGATAACAGTGAGCGTTTCCCGTCGGTACTGGTGCAGGAACTGATCGACTACATCGGGCAAAGTCATTATCTACCGGGCGATGAAGCGCTCAACTGTGATGAAAGCGAGGCAAGGGTAAAAGCGCATCTTACTTGCCTCCATACCCGGATGCCGTTTGATCCACAAAACTACCAGCCAGGCGAACGACAAAGCTATGCTCGTGAATGGCTACCTGCGGCCAGCCAGGCTGGTAAAGCACATTCTGAATTTGTTCAGCCGCTGCCGTTTACCTTACCGGAAACCGTGCCGCTGGAAACGCTACAACGATTCTGGGCACATCCGGTGCGGGCATTTTTCCAGATGCGTTTGCAGGTGAACTTCCGTACTGAAGACAGCGAAATCCCCGACACCGAGCCATTTATTCTGGAAGGACTTAGCCGTTATCAAATCAATCAGCAGTTATTGAATGCACTGGTTGAGCAGGATGATGCCGAACGCTTGTTCCGCCGCTTCCGAGCGGCAGGGGATTTACCGTATGGCGCTTTTGGTGAAATTTTCTGGGAAACACAGTGCCAGGAGATGCAGCAGCTTGCCGACAGAGTCATTGCCTGTCGCCAGCCGGGGCAGAGTATGGAAATTGATCTCGCCTGCAACGGTGTGCAGATAACTGGCTGGTTGCCGCAGGTGCAGCCGGATGGCCTGTTGCGCTGGCGTCCCTCTTTATTAAGTGTGGCCCAGGGAATGCAACTTTGGCTGGAACACCTTGTCTACTGTGCCAGCGGTGGTAATGGTGAAAGTCGCCTTTTTCTACGCAAAGACGGCGAGTGGCGTTTTCCGCCGCTTGCAGCCGAACAGGCTTTGCATTACCTCTCACAACTGATTGAGGGGTATCGTGAAGGAATGTCCGCGCCATTGCTGGTGTTACCTGAAAGTGGCGGCGCGTGGCTAAAAACCTGTTATGACGCGCAAAACGATGCCATGCTGGATGACGATTCCACGTTGCAAAAAGCCCGTACGAAATTCCTTCAGGCTTACGAAGGCAACATGATGGTGCGTGGCGAAGGTGATGATATCTGGTATCAAAGGCTCTGGCGGCAATTAACACCAGAGACAATGGAGGCCATCGTTGAACAGTCGCAACGTTTCCTGTTACCGCTGTTTCGCTTTAATCAGTCATGA", 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"gene_synonym", + "JW2803" + ], + [ + "gene_synonym", + "NP_417312.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39196" + ], + [ + "gene_synonym", + "b2835" + ], + [ + "gene_synonym", + "lplT" + ], + [ + "gene_synonym", + "ygeD" + ] + ], + "dna_sequence": 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"transcriptional activator of lysA", + "autorepressor" + ], + "id": "CDS_2799", + "location": [ + [ + "NC_000913", + 2979021, + "+", + 936 + ] + ], + "md5": "145802e895635277c0bdb5b1fc77c7c9", + "parent_gene": "", + "protein_md5": "8f06cdf609cc9068d25506aa8d5385fe", + "protein_translation": "MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEKVIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLPVFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTERTELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKRRMIVETHSAASVCAMVRAGVGISVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLHRPSSALVQAFSGHLQAGLPKLVTSLDAILSSATTA", + "protein_translation_length": 311, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009315" + ], + [ + "gene_synonym", + "ECK2838" + ], + [ + "gene_synonym", + "EcoGene:EG11157" + ], + [ + "gene_synonym", + "GI:16130744" + ], + [ + "gene_synonym", + "GeneID:947348" + ], + [ + "gene_synonym", + "JW2808" + ], + [ + "gene_synonym", + "NP_417317.1" + ], + [ + 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"-", + 693 + ] + ], + "md5": "bb31d68eec8f4a6e4199d5f9db639de3", + "parent_gene": "", + "protein_md5": "50b6523e7b1ee39a47d6d54927c327dd", + "protein_translation": "MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLHSVDFHEIEECQRRGEWDKTGDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFLHIADATGRAITGAGMTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYCAQVIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAAIHAEDAVAFMLS", + "protein_translation_length": 230, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009319" + ], + [ + "gene_synonym", + "ECK2839" + ], + [ + "gene_synonym", + "EcoGene:EG10056" + ], + [ + "gene_synonym", + "GI:16130745" + ], + [ + "gene_synonym", + "GeneID:947341" + ], + [ + "gene_synonym", + "JW2809" + ], + [ + "gene_synonym", + "NP_417318.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE24" + ], + [ + "gene_synonym", + "araE" + ], + [ + "gene_synonym", + "b2841" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "GI:16130746" + ], + [ + "gene_synonym", + "GeneID:947323" + ], + [ + "gene_synonym", + "JW2810" + ], + [ + "gene_synonym", + "NP_417319.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37769" + ], + [ + "gene_synonym", + "b2842" + ], + [ + "gene_synonym", + "kduD" + ], + [ + "gene_synonym", + "ygeC" + ], + [ + "gene_synonym", + "yqeD" + ] + ], + "dna_sequence": 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"ATGTACTGGATTATTAACGATAATATCGAGTTCTGGCCTGAGCACCGAAAATTAATATCGGTACATAACGCCGATCTTAACGTCGTTCTGACAACGCCAGCCAGTCGATGTTTATCACTTCTACTTGAAGCTTTTCCTGATGTGGTTGCACAACAAGATTTTTTCACCAGAGTCTGGGAAGAAGAAGGTATGCGTGTGCCTACTAACACGTTATATCAGAACATATCCATTATCAGACGCGGATTTCGCGCTGTTGGTGATACTACCCACTCGCTAATTGCAACCGTGCCGAGAAGAGGATTCAAGATCCATAATGACATTAACATACAAAATCATGTAATAAACTCGTCAACAGACGCACATACACACAATGCCCCACCTGCCATAAAAGTTAATGCGGGATACAAAGAGAGCATTGGTGGCGCAAAGAATTTCAATAACAAAATCCTCAAACATATAAAAAGTCATCTAATTATGTTGAGCGCATTTGTCATAGGCGCATATTCTGCATATTGGCTATGGAATAATAATCAACCGAAGCCATTTTTCAAGGATTACAAGACTGTTGCGGAAATTAATGGCTGCCATTTTAATGTAACAGAAGATACAATTGATGGGTTGAAAGAGTTCGATAAATATAAAACACGGATACTGGATTCGGGGATTAACTGTAAAAAACATCCGTGGTTATACTTCCCTCTTGCAAAATCCTCACCGGGGATGATTGTTATGGCATGCAATAAAAACTATAACCAACATGAAGTGGCAAACTGTTTAACCCTGTCTTACCGTGAGGTTAATCGTGATTGA", + "dna_sequence_length": 810, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_2807", + "location": [ + [ + "NC_000913", + 2988502, + "+", + 810 + ] + ], + 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"GTGATTGATTATAAAAAAAACTTATTATTTATTTTAGTTTTTATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACACTGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGTAATTTTTAATGACCAGGGACGAGCAAATCTTACCATCGACTTTATGTATAACAAAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGTAACAGAGAAAGTAAATCAATACGGCGAAATATTGAATACACATGGATTGAAAACTATGACACAGCCCATTTAACATCAAAGAAAGTTAATAAGTTTGAGATTATGGATCAAGTTGATGATGATAGACTTGCACAACTTATTCCTGATTTTTATGTCTTTCCAGAAAAAAGTGTAAGCTATAATATACTAAAGCAAGGTAAGCATGCTTTTATTTTGAGCATTGGTAACAGAGCAATAATGCATTGTGCAAGGTAA", + "dna_sequence_length": 483, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_2808", + "location": [ + [ + "NC_000913", + 2989304, + "+", + 483 + ] + ], + "md5": "e47f6020f992acd879a219387fa3ed7e", + "parent_gene": "", + "protein_md5": "4e43668734e105de99887301275df018", + "protein_translation": "MIDYKKNLLFILVFISGFILFTVYSYTAEKMIYNETCTANWVIFNDQGRANLTIDFMYNKKNKTGTVALSGTWQQGNRESKSIRRNIEYTWIENYDTAHLTSKKVNKFEIMDQVDDDRLAQLIPDFYVFPEKSVSYNILKQGKHAFILSIGNRAIMHCAR", + "protein_translation_length": 160, 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"ATGAAGCCACGAAATATTAATAATAGCCTACCACTGCAACCATTAGTTCCTGATCAGGAGAACAAAAATAAGAAAAATGAAGAGAAATCCGTTAATCCAGTTAAAATCACAATGGGGTCTGGTTTAAATTATATTGAACAAGAATCTCTTGGAGGAAAATATCTAACACATGATTTGTCAATAAAGATAGCGGATATTTCTGAAGAGATAATTCAGCAAGCAATATTATCTGCTATGAGCATATATAAATTTTCGATAACAGATGATTTAATGAGTATGGCTGTAAATGAACTCATAAAACTGACCAAAATAGAGAATAATGTAGACCTGAATAAATTCACTACTATATGCACAGACGTTCTATCCCCCCGCGTCACCAGACATAATAAAGAAAAAAAAACAAACGACATTCTACCCTTCTCAAAAATCCCCTTTTTAATTTTCATTGAAAAAATGGCAATTGATACTATGAATCCAGGTCATACACATTAA", + "dna_sequence_length": 492, + "id": "CDS_2811", + "location": [ + [ + "NC_000913", + 2990554, + "+", + 396 + ], + [ + "NC_000913", + 2990948, + "+", + 96 + ] + ], + "md5": "597db7cf7e979991510a1414df170d29", + "parent_gene": "", + "protein_md5": "dba1fab0a2c0e8aa60c3b7307e4f4403", + "protein_translation": "MKPRNINNSLPLQPLVPDQENKNKKNEEKSVNPVKITMGSGLNYIEQESLGGKYLTHDLSIKIADISEEIIQQAILSAMSIYKFSITDDLMSMAVNELIKLTKIENNVDLNKFTTICTDVLSPRVTRHNKEKKTNDILPFSKIPFLIFIEKMAIDTMNPGHTH", + "protein_translation_length": 163, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009364" + ], + [ + "gene_synonym", + "ECK2849" + ], + [ + "gene_synonym", + "EcoGene:EG13037" + ], + [ + "gene_synonym", + "GI:16130755" + ], + [ + "gene_synonym", + "GeneID:946986" + ], + [ + "gene_synonym", + "JW2819" + ], + [ + "gene_synonym", + "NP_417328.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46787" + ], + [ + "gene_synonym", + "b2851" + ], + [ + "gene_synonym", + "ygeG" + ] + ], + "dna_sequence": "ATGAGCACAGAAACAATTGAAATATTCAATAATAGTGATGAATGGGCAAATCAACTAAAACACGCATTATCGAAAGGAGAAAATCTGGCATTACTACATGGTTTAACTCCTGATATCCTTGATAGAATATATGCATATGCATTCGACTACCATGAAAAGGGTAATATAACGGACGCAGAAATTTATTATAAATTCTTGTGCATTTATGCGTTCGAAAATCATGAGTATCTAAAAGATTTTGCATCAGTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCGATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAA", + "dna_sequence_length": 492, + "functions": [ + "SycD-like chaperone family TPR-repeat-containing protein" + ], + "id": "CDS_2812", + "location": [ + [ + "NC_000913", + 2991268, + "+", + 492 + ] + ], + "md5": "90678672da3447583759442e49167d65", + "parent_gene": "", + "protein_md5": "5444ce373fc6777ca03ce5bbf90ff67e", + "protein_translation": 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"ATGGACTTAGAAAATAAATTCTCATATCATTTTCTTGAGGGATTAACGCTCACGGAAGATGGAATTCTTACTCAAGGAAATGAGCAAGTTTATATTCCACAGAAAGAGTTAGGTGTATTAATAGTATTACTTGAATCCGCTGGTCATGTTGTACTGAAAGATATGATCATCGAATCAGTATGGAAAAATATTATTGTTAGTGACGAGTCCCTGACAAGATGTATCTATTCTTTGCGCTGCATTTTTGAAAAAATTGGCTATGATCGTTGCATAGAAACAATCTACCGGAAAGGTTATCGTTTCAGCGGGCAGGTTTTCAAAACTAAAATTAATGAAGATAATACTTCAGACTATTCCATAGCTATATTCCCTTTCACTACTTCATTGAATACACTGGATCCATTAATACTTAATCAGGAATTAGTGCAAATCATTTCAAATAAAAAAATCGATGGTCTCTATACCTATCCGATGGCTGCGACAAATTTTTGTAATGATCACATATCTCAAAATTCATTCTTGAGCAGATTCAAGCCAGATTATTTCGTTACAGGAAGAATAAACCAGAATAATGCAGTGAACACTTTATACATTGAGTTGATCGACGCTAAAAACCTTTTCCTCATCGCCAGTAATCATCTCCCTGTTGATGAACTACATAATACATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGCACTTCATGGAAAAAGTGAACTTGAACTTGCTGCTCAAAAAGCATTAGAGCTTTTAGATTATGTATCAGACATAACCACTGTCGATGGAAAAATTTTAGCTATTATGGGACTGATAACTGGTCTGTCTGGACAAGCAAAAGTATCTCATATCTTATTTGAACAGGCTAAGATACACTCAACTGATATAGCCTCTCTCTACTACTATAGGGCACTAGTCCACTTTCATAATGAAAAAATTGAAGAGGCAAGGATTTGTATAGACAAATCACTACAACTCGAACCCAGAAGACGAAAAGCAGTTGTGATAAAAGAATGTGTAGATATGTATGTGCCTAACCCGCTCAAAAACAACATTAAACTCTACTATAAAGAAACTGAGAGTGAAAGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAA", 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"MNHSETITIECTINGMPFQLHAAPGTPLSELLREQGLLSVKQGCCVGECGACTVLVDGTAIDSCLYLAAWAEGKEIRTLEGEAKGGKLSHVQQAYAKSGAVQCGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLDCEKTK", + "protein_translation_length": 159, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009420" + ], + [ + "gene_synonym", + "ECK2865" + ], + [ + "gene_synonym", + "EcoGene:EG13052" + ], + [ + "gene_synonym", + "GI:16130771" + ], + [ + "gene_synonym", + "GeneID:947320" + ], + [ + "gene_synonym", + "JW2837" + ], + [ + "gene_synonym", + "NP_417345.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46802" + ], + [ + "gene_synonym", + "b2869" + ], + [ + "gene_synonym", + "ygeV" + ] + ], + "dna_sequence": 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amino acid kinase" + ], + "id": "CDS_2831", + "location": [ + [ + "NC_000913", + 3011461, + "+", + 933 + ] + ], + "md5": "f49deed5e2f61338d35cc8dbf7e568ae", + "parent_gene": "", + "protein_md5": "1f71bd628b1094941a35fcc94fe24213", + "protein_translation": "MSKKIVLALGGNALGDDLAGQMKAVKITSQAIVDLIAQGHEVIVTHGNGPQVGMINQAFEAAAKTEAHSPMLPMSVCVALSQGYIGYDLQNALREELLSRGINKPVATLVTQVEVDANDPAFLNPTKPIGSFFTEQEAEQLTKQGYTLKEDAGRGYRRVVASPKPVDIIEKETVKALVDAGQVVITVGGGGIPVIREGNHLRGASAVIDKDWASARLAEMIDADMLIILTAVEKVAINFGKENEQWLDRLSLSDAERFIEEGHFAKGSMLPKVEAAASFARSRAGREALITVLSKAKEGIEGKTGTVICQ", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009441" + ], + [ + "gene_synonym", + "ECK2871" + ], + [ + "gene_synonym", + "EcoGene:EG13058" + ], + [ + "gene_synonym", + "GI:16130777" + ], + [ + "gene_synonym", + "GeneID:947357" + ], + [ + "gene_synonym", + "JW2843" + ], + [ + "gene_synonym", + "NP_417351.1" + ], + [ + "gene_synonym", + 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"MSAIDCIITAAGLSSRMGQWKMMLPWEQGTILDTSIKNALQFCSRIILVTGYRGNELHERYANQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDMPTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIQRPNVTNMRQALLMGDHYSVEIENAEIILDIDTPDDFITAKERYTEI", + "protein_translation_length": 192, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009450" + ], + [ + "gene_synonym", + "ECK2874" + ], + [ + "gene_synonym", + "EcoGene:EG13061" + ], + [ + "gene_synonym", + "GI:16130780" + ], + [ + "gene_synonym", + "GeneID:949068" + ], + [ + "gene_synonym", + "JW5923" + ], + [ + "gene_synonym", + "NP_417354.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46811" + ], + [ + "gene_synonym", + "b2878" + ], + [ + "gene_synonym", + "ygfK" + ] + ], + "dna_sequence": 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"MGDIMRPIPFEELLTRIFDEYQQQRSIFGIPEQQFYSPVKGKTVSVFGETCATPVGPAAGPHTQLAQNIVTSWLTGGRFIELKTVQILDRLELEKPCIDAEDECFNTEWSTEFTLLKAWDEYLKAWFALHLLEAMFQPSDSGKSFIFNMSVGYNLEGIKQPPMQQFIDNMMDASDHPKFAQYRDTLNKLLQDDAFLARHGLQEKRESLQALPARIPTSMVHGVTLSTMHGCPPHEIEAICRYMLEEKGLNTFVKLNPTLLGYARVREILDVCGFGYIGLKEESFDHDLKLTQALEMLERLMALAKEKSLGFGVKLTNTLGTINNKGALPGEEMYMSGRALFPLSINVAAVLSRAFDGKLPISYSGGASQLTIRDIFDTGIRPITMATDLLKPGGYLRLSACMRELEGSDAWGLDHVDVERLNRLAADALTMEYTQKHWKPEERIEVAEDLPLTDCYVAPCVTACAIKQDIPEYIRLLGEHRYADALELIYQRNALPAITGHICDHQCQYNCTRLDYDSALNIRELKKVALEKGWDEYKQRWHKPAGSGSRHPVAVIGAGPAGLAAGYFLARAGHPVTLFEREANAGGVVKNIIPQFRIPAELIQHDIDFVAAHGVKFEYGCSPDLTIEQLKNQGFHYVLIATGTDKNSGVKLAGDNQNVWKSLPFLREYNKGTALKLGKHVVVVGAGNTAMDCARAALRVPGVEKATIVYRRSLQEMPAWREEYEEALHDGVEFRFLNNPERFDADGTLTLRVMSLGEPDEKGRRRPVETNETVTLLVDSLITAIGEQQDTEALNAMGVPLDKNGWPDVDHNGETRLTDVFMIGDVQRGPSSIVAAVGTARRATDAILSRENIRSHQNDKYWNNVNPAEIYQRKGDISITLVNSDDRDAFVAQEAARCLECNYVCSKCVDVCPNRANVSIAVPGFQNRFQTLHLDAYCNECGNCAQFCPWNGKPYKDKITVFSLAQDFDNSSNPGFLVEDCRVRVRLNNQSWVLNIDSKGQFNNVPPELNDMCRIISHVHQHHHYLLGRVEV", + "protein_translation_length": 1032, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009452" + ], + [ + "gene_synonym", + "ECK2875" + ], + [ + "gene_synonym", + "EcoGene:EG13062" + ], + [ + "gene_synonym", + "GI:90111506" + ], + [ + "gene_synonym", + "GeneID:949072" + ], + [ + "gene_synonym", + "JW2847" + ], + [ + "gene_synonym", + "NP_417355.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46812" + ], + [ + "gene_synonym", + "b2879" + ], + [ + "gene_synonym", + "ssnA" + ], + [ + "gene_synonym", + "ygfL" + ] + ], + "dna_sequence": 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+ "dna_sequence_length": 1329, + "functions": [ + "putative chlorohydrolase/aminohydrolase" + ], + "id": "CDS_2836", + "location": [ + [ + "NC_000913", + 3019161, + "+", + 1329 + ] + ], + "md5": "98345eae57a0c52ff1fc1d6157dea8e5", + "parent_gene": "", + "protein_md5": "26acda6262c33e006fdca9452f6991a5", + "protein_translation": "MLILKNVTAVQLHPAKVQEGVDIAIENDVIVAIGDALTQRYPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPCPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNNGIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHHWYGKDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNHVGYNHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRDAGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADLTICDYNSPTPLLADNIAGHIAFGMGSGSVHSVMVNGVMVYEDRQFNFDCDSIYAQARKAAASMWRRMDALA", + "protein_translation_length": 442, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009456" + ], + [ + "gene_synonym", + "ECK2876" + ], + [ + "gene_synonym", + "EcoGene:EG13063" + ], + [ + "gene_synonym", + "GI:16130782" + ], + [ + "gene_synonym", + "GeneID:949071" + ], + [ + "gene_synonym", + "JW2848" + ], + [ + "gene_synonym", + "NP_417356.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64557" + ], + [ + "gene_synonym", + "b2880" + ], + [ + "gene_synonym", + "ygfM" + ] + ], + "dna_sequence": "ATGATTGAACAATTTTTCAGGCCCGACTCTGTCGAACAGGCGCTGGAACTGAAGCGCCGCTACCAGGATGAAGCCGTCTGGTTCGCCGGGGGCAGCAAACTCAATGCTACACCAACCCGTACCGATAAAAAGATTGCCATTTCCTTACAGGATCTGGAACTGGACTGGGTTGACTGGGATAACGGTGCACTGCGGATTGGCGCAATGTCTCGCTTGCAGCCACTGCGTGATGCGCGATTTATTCCTGCAGCGCTGCGTGAAGCCCTCGGTTTTGTTTACTCACGCCATGTTCGTAATCAGTCGACCATTGGTGGTGAAATCGCCGCCCGCCAGGAAGAGTCGGTGCTGCTTCCCGTCCTGTTGGCACTGGATGCTGAACTGGTTTTTGGCAACGGCGAAACGCTGTCAATCGAGGACTACCTGGCCTGCCCATGCGATCGCCTGCTAACCGAAATTATCATTAAAGATCCGTATCGCACCTGTGCGACCCGCAAAATTAGCCGTTCTCAGGCAGGTTTAACCGTCGTGACGGCAGCCGTTGCAATGACAGACCACGACGGTATGCGAATTGCGCTGGATGGCGTCGCCAGTAAAGCACTGCGTCTGCATGATGTCGAAAAACAAAATCTGGAAGGCAATGCACTTGAACAGGCTGTCGCCAACGCCATTTTCCCGCAGGAAGATTTGCGGGGCAGCGTGGCCTATAAACGCTATATCACGGGAGTTCTGGTAGCCGACCTGTATGCCGACTGCCAACAGGCTGGGGAGGAAGCCGTATGA", + "dna_sequence_length": 780, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_2837", + "location": [ + [ + "NC_000913", + 3020540, + "+", + 780 + ] + ], + "md5": "756afcd10d0393c4de487bf5ae980ab4", + "parent_gene": "", + "protein_md5": "be97866f61c7dc08f7edcd699c4015ca", + "protein_translation": "MIEQFFRPDSVEQALELKRRYQDEAVWFAGGSKLNATPTRTDKKIAISLQDLELDWVDWDNGALRIGAMSRLQPLRDARFIPAALREALGFVYSRHVRNQSTIGGEIAARQEESVLLPVLLALDAELVFGNGETLSIEDYLACPCDRLLTEIIIKDPYRTCATRKISRSQAGLTVVTAAVAMTDHDGMRIALDGVASKALRLHDVEKQNLEGNALEQAVANAIFPQEDLRGSVAYKRYITGVLVADLYADCQQAGEEAV", + "protein_translation_length": 259, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009459" + ], + [ + "gene_synonym", + "ECK2877" + ], + [ + "gene_synonym", + "EcoGene:EG13064" + ], + [ + "gene_synonym", + "GI:16130783" + ], + [ + "gene_synonym", + "GeneID:949079" + ], + [ + "gene_synonym", + "JW2849" + ], + [ + "gene_synonym", + "NP_417357.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46814" + ], + [ + "gene_synonym", + "b2881" + ], + [ + "gene_synonym", + "xdhD" + ], + [ + "gene_synonym", + "ygfN" + ] + ], + "dna_sequence": "ATGATCATCCACTTTACTTTAAATGGCGCGCCTCAGGAGCTAACCGTTAATCCAGGCGAAAACGTGCAAAAGCTGTTGTTTAACATGGGAATGCACTCTGTACGCAACAGTGATGATGGTTTCGGGTTTGCCGGTTCTGACGCAATAATCTTTAACGGTAATATCGTTAACGCGTCCTTGCTTATTGCCGCACAGTTAGAGAAGGCAGATATTCGTACCGCAGAATCTCTGGGCAAATGGAACGAGTTAAGTCTGGTTCAACAGGCAATGGTTGATGTTGGCGTGGTGCAGTCTGGTTATAACGATCCAGCTGCAGCTCTGATTATCACCGATCTTCTCGATCGCATCGCCGCACCTACCCGCGAAGAGATCGACGACGCGCTTTCTGGTTTGTTCAGCCGCGATGCTGGCTGGCAGCAATACTATCAGGTCATTGAACTGGCGGTTGCACGTAAAAATAATCCGCAGGCCACCATTGATATCGCTCCGACTTTCCGTGACGACCTAGAAGTCATTGGTAAGCATTATCCTAAAACTGATGCCGCGAAAATGGTGCAGGCGAAACCCTGCTATGTTGAAGACCGCGTAACGGCTGACGCCTGCGTCATTAAAATGTTACGTAGCCCACACGCTCACGCACTGATTACTCATCTGGATGTCAGCAAAGCTGAAGCCTTACCGGGCGTCGTTCACGTTATTACTCACCTGAATTGCCCGGATATCTACTATACCCCGGGTGGTCAGAGCGCACCGGAACCGTCACCGCTTGACCGCCGTATGTTCGGCAAGAAAATGCGTCACGTCGGCGATCGTGTTGCTGCGGTCGTCGCAGAAAGTGAAGAAATTGCGCTCGAAGCACTGAAGCTCATCGACGTTGAATATGAAGTGCTTAAGCCGGTAATGTCGATCGACGAAGCAATGGCGGAAGATGCGCCTGTCGTGCACGATGAACCGGTGGTGTATGTTGCTGGTGCGCCAGATACTCTGGAAGACGATAACAGCCATGCAGCCCAGCGCGGCGAGCATATGATCATCAACTTCCCGATCGGTTCTCGCCCTCGCAAAAATATCGCCGCCAGTATTCATGGTCATATTGGCGATATGGACAAAGGCTTTGCCGATGCCGATGTGATCATTGAGCGAACCTATAACTCAACGCAAGCGCAGCAGTGCCCGACTGAAACACATATCTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTGACCGGGCGTCCGGTACTGTTCCGCTACACCCGTGAAGAAGAGTTTATTGCTAACACCTCTCGTCACGTCGCGAAAGTCACCGTCAAACTGGGAGCGAAAAAAGATGGTCGCCTGACGGCAGTGAAGATGGATTTCCGCGCCAACACTGGCCCTTACGGCAACCACTCACTCACCGTACCGTGTAACGGACCGGCGCTGTCGCTGCCGTTATATCCGTGCGATAACGTCGATTTCCAGGTCACCACCTACTACAGCAACATTTGCCCAAATGGTGCTTATCAGGGTTATGGCGCACCGAAAGGTAACTTCGCTATCACCATGGCATTAGCGGAACTGGCTGAACAGTTACAGATCGACCAACTGGAAATTATCGAACGTAACCGGGTACACGAAGGGCAAGAGCTGAAAATTCTCGGTGCAATCGGTGAAGGTAAAGCGCCGACCTCCGTTCCTTCCGCCGCCAGCTGTGCACTGGAAGAGATCCTGCGTCAGGGTCGCGAGATGATCCAATGGTCGTCACCGAAACCGCAAAATGGTGACTGGCACATCGGTCGCGGCGTCGCCATTATCATGCAGAAATCGGGTATCCCGGATATCGATCAGGCTAACTGCATGATCAAACTGGAATCGGACGGCACCTTTATCGTTCATTCTGGCGGTGCGGATATTGGTACTGGTCTGGATACTGTAGTGACGAAACTGGCAGCAGAAGTGCTGCACTGCCCACCGCAGGACGTGCATGTTATCTCCGGTGATACCGATCATGCGTTGTTTGATAAAGGCGCATATGCCTCGTCCGGTACTTGCTTCTCGGGTAACGCGGCGCGTTTGGCAGCGGAAAATCTACGGGAGAAAATTCTGTTCCACGGCGCGCAAATGTTGGGTGAGCCAGTGGCAGATGTTCAACTGGCAACGCCGGGCGTCGTGCGCGGCAAGAAAGGCGAAGTTAGTTTCGGGGATATTGCCCATAAAGGCGAAACCGGCACCGGCTTTGGTTCACTGGTGGGAACTGGCAGTTATATCACGCCTGATTTCGCCTTCCCGTATGGCGCAAACTTCGCTGAAGTTGCCGTCAACACGCGTACGGGTGAAATCCGCCTGGATAAATTCTACGCCTTGCTGGACTGCGGTACACCGGTCAATCCAGAGTTAGCGTTGGGACAAATCTACGGTGCCACCCTGCGTGCTATCGGCCACAGTATGAGCGAAGAGATCATTTATGACGCCGAAGGTCACCCGTTAACGCGTGATTTACGCAGTTACGGCGCACCGAAAATTGGTGACATTCCGCGTGATTTCCGCGCTGTGCTGGTGCCGAGCGACGATAAAGTCGGCCCGTTCGGGGCGAAATCGATCTCGGAAATCGGTGTAAATGGCGCAGCTCCGGCGATTGCTACCGCAATTCACGATGCATGCGGCATCTGGTTACGCGAATGGCATTTCACACCGGAGAAAATACTCACTGCGCTGGAAAAAATATAA", + "dna_sequence_length": 2871, + "functions": [ + "putative hypoxanthine oxidase, molybdopterin-binding/Fe-S binding" + ], + "id": "CDS_2838", + "location": [ + [ + "NC_000913", + 3021316, + "+", + 2871 + ] + ], + "md5": "1580c7c538c835650e1164cab4d0ef34", + "parent_gene": "", + "protein_md5": "e4f20fbf39c5091b4f3096141689d0d9", + "protein_translation": "MIIHFTLNGAPQELTVNPGENVQKLLFNMGMHSVRNSDDGFGFAGSDAIIFNGNIVNASLLIAAQLEKADIRTAESLGKWNELSLVQQAMVDVGVVQSGYNDPAAALIITDLLDRIAAPTREEIDDALSGLFSRDAGWQQYYQVIELAVARKNNPQATIDIAPTFRDDLEVIGKHYPKTDAAKMVQAKPCYVEDRVTADACVIKMLRSPHAHALITHLDVSKAEALPGVVHVITHLNCPDIYYTPGGQSAPEPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALEALKLIDVEYEVLKPVMSIDEAMAEDAPVVHDEPVVYVAGAPDTLEDDNSHAAQRGEHMIINFPIGSRPRKNIAASIHGHIGDMDKGFADADVIIERTYNSTQAQQCPTETHICFTRMDGDRLVIHASTQVPWHLRRQVARLVGMKQHKVHVIKERVGGGFGSKQDILLEEVCAWATCVTGRPVLFRYTREEEFIANTSRHVAKVTVKLGAKKDGRLTAVKMDFRANTGPYGNHSLTVPCNGPALSLPLYPCDNVDFQVTTYYSNICPNGAYQGYGAPKGNFAITMALAELAEQLQIDQLEIIERNRVHEGQELKILGAIGEGKAPTSVPSAASCALEEILRQGREMIQWSSPKPQNGDWHIGRGVAIIMQKSGIPDIDQANCMIKLESDGTFIVHSGGADIGTGLDTVVTKLAAEVLHCPPQDVHVISGDTDHALFDKGAYASSGTCFSGNAARLAAENLREKILFHGAQMLGEPVADVQLATPGVVRGKKGEVSFGDIAHKGETGTGFGSLVGTGSYITPDFAFPYGANFAEVAVNTRTGEIRLDKFYALLDCGTPVNPELALGQIYGATLRAIGHSMSEEIIYDAEGHPLTRDLRSYGAPKIGDIPRDFRAVLVPSDDKVGPFGAKSISEIGVNGAAPAIATAIHDACGIWLREWHFTPEKILTALEKI", + "protein_translation_length": 956, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009463" + ], + [ + "gene_synonym", + "ECK2878" + ], + [ + "gene_synonym", + "EcoGene:EG13065" + ], + [ + "gene_synonym", + "GI:90111507" + ], + [ + "gene_synonym", + "GeneID:949075" + ], + [ + "gene_synonym", + "JW2850" + ], + [ + "gene_synonym", + "NP_417358.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67444" + ], + [ + "gene_synonym", + "b2882" + ], + [ + "gene_synonym", + "xanQ" + ], + [ + "gene_synonym", + "ygfO" + ] + ], + "dna_sequence": "ATGTCTGATATAAACCATGCAGGTTCTGACCTTATATTTGAACTGGAGGATCGCCCTCCCTTTCATCAGGCTCTCGTTGGTGCCATTACCCATCTGTTGGCAATTTTCGTTCCGATGGTAACCCCCGCGTTAATCGTGGGTGCGGCCTTACAGCTTTCCGCTGAAACAACTGCCTATCTTGTTTCTATGGCGATGATCGCCTCTGGTATTGGTACCTGGTTACAAGTAAACCGCTACGGCATCGTCGGTTCTGGCCTACTCTCAATTCAGTCAGTCAATTTTTCATTTGTTACGGTCATGATTGCGCTGGGCAGCAGCATGAAAAGCGACGGTTTTCACGAAGAGTTAATCATGTCGTCGCTTCTCGGCGTCTCCTTCGTTGGCGCATTTCTGGTTGTCGGATCTTCATTTATCTTGCCCTATTTACGTCGGGTTATTACGCCTACCGTCAGCGGTATTGTGGTACTGATGATCGGCTTAAGCCTGATTAAAGTCGGCATTATCGATTTTGGTGGAGGATTTGCAGCCAAAAGCAGCGGTACGTTCGGCAATTACGAACATCTCGGCGTTGGTTTATTGGTTTTAATTGTGGTGATCGGCTTTAACTGCTGTCGCAGTCCGTTGCTACGCATGGGAGGGATCGCCATTGGGCTATGTGTCGGCTATATCGCATCGTTATGCCTGGGCATGGTGGATTTCAGCAGTATGCGCAATTTGCCGTTAATCACCATCCCGCATCCGTTCAAATACGGCTTTAGTTTTAGCTTCCATCAGTTCCTGGTGGTTGGCACGATTTATCTGCTTAGCGTGCTGGAAGCAGTCGGCGATATCACCGCCACGGCAATGGTTTCCCGCCGCCCCATTCAGGGGGAAGAGTATCAGTCCCGGCTGAAAGGCGGCGTGCTGGCAGATGGTCTGGTTTCTGTTATCGCCTCCGCTGTCGGTTCATTACCATTAACCACGTTTGCGCAAAATAATGGGGTTATTCAGATGACTGGCGTCGCTTCACGTTATGTCGGGCGAACCATCGCGGTAATGCTGGTTATCCTCGGCTTATTTCCGATGATTGGCGGCTTCTTCACGACCATTCCCTCGGCAGTTCTGGGAGGCGCAATGACGTTGATGTTTTCCATGATTGCCATCGCAGGGATTCGCATCATCATCACCAACGGTTTAAAGCGCCGTGAAACACTTATTGTCGCCACTTCTTTAGGTTTAGGGCTTGGCGTCTCCTACGATCCCGAAATTTTTAAAATATTGCCAGCCTCTATTTATGTATTAGTTGAAAACCCTATTTGTGCTGGCGGGTTAACTGCGATTTTATTAAATATTATCCTCCCTGGTGGCTACCGACAGGAAAACGTTCTGCCTGGTATTACCTCAGCGGAAGAGATGGATTAA", 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"gene_synonym", + "GI:16130785" + ], + [ + "gene_synonym", + "GeneID:947366" + ], + [ + "gene_synonym", + "JW5466" + ], + [ + "gene_synonym", + "NP_417359.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P76641" + ], + [ + "gene_synonym", + "b2883" + ], + [ + "gene_synonym", + "guaD" + ], + [ + "gene_synonym", + "ygfP" + ] + ], + "dna_sequence": 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"ATGAATAAGTTTATTGCTGCTGAAGCTGCGGAATGTATAGGCTGTCATGCTTGTGAAATTGCCTGTGCGGTGGCACACAATCAAGAAAACTGGCCGCTGAGTCACAGTGACTTTCGACCGCGTATCCACGTTGTAGGGAAAGGCCAGGCTGCGAATCCGGTGGCCTGCCATCACTGCAACAATGCCCCTTGCGTTACGGCTTGTCCGGTTAATGCTCTGACTTTCCAGTCCGATAGCGTACAACTGGACGAGCAAAAATGTATTGGTTGTAAAAGATGCGCAATCGCTTGCCCCTTTGGCGTCGTTGAGATGGTCGATACGATTGCGCAGAAATGCGACCTTTGTAACCAGCGCAGTTCCGGCACGCAAGCCTGTATTGAAGTTTGCCCAACACAGGCGTTACGACTGATGGACGATAAAGGGTTGCAGCAGATAAAGGTGGCCCGCCAGCGCAAAACGGCAGCAGGAAAAGCGTCATCAGACGCTCAGCCATCTCGCAGTGCAGCGTTGCTCCCCGTTAACTCGCGTAAAGGCGCAGATAAAATTTCAGCGAGTGAACGGAAAACCCACTTTGGCGAAATATATTGCGGGCTGGATCCACAACAAGCGACTTATGAGAGTGACCGCTGTGTTTATTGTGCCGAAAAAGCTAACTGCAACTGGCATTGCCCGCTGCATAACGCTATTCCGGATTACATCCGTCTGGTACAGGAAGGAAAGATTATTGAAGCGGCAGAACTTTGCCACCAGACCAGTTCCTTACCAGAAATTTGCGGCAGGGTATGTCCACAGGACCGTCTTTGTGAAGGCGCATGTACTTTGAAAGATCACTCGGGCGCAGTCTCTATCGGTAATCTGGAACGCTACATCACCGATACCGCGCTGGCGATGGGCTGGCGTCCCGATGTCAGCAAAGTTGTTCCCCGTAGCGAAAAAGTGGCGGTGATTGGCGCTGGGCCTGCAGGGTTAGGGTGTGCTGATATTCTGGCGCGCGCAGGAGTTCAGGTCGATGTCTTTGATCGCCATCCAGAAATTGGCGGTATGCTGACTTTTGGCATTCCTCCTTTCAAACTCGATAAAACGGTATTAAGCCAGCGGCGAGAGATATTCACCGCAATGGGAATCGACTTTCATCTTAACTGTGAAATTGGCCGCGATATTACCTTTAGCGATTTAACTTCTGAATATGATGCAGTTTTCATCGGCGTGGGGACTTACGGGATGATGCGAGCAGATCTGCCGCATGAAGATGCGCCCGGTGTCATTCAGGCTCTACCGTTCCTGACTGCCCATACCCGCCAGCTCATGGGATTGCCGGAGTCTGAAGAGTATCCGCTGACGGACGTGGAAGGTAAGCGAGTCGTGGTATTGGGCGGTGGCGATACGACAATGGATTGTTTGCGGACTTCCATCCGCCTCAATGCCGCCAGCGTGACCTGCGCGTATCGTCGTGATGAAGTCAGTATGCCGGGCTCGCGCAAAGAGGTGGTTAATGCGCGCGAGGAAGGTGTCGAGTTTCAGTTCAATGTTCAACCGCAATATATCGCTTGTGACGAAGATGGGCGTTTAACTGCGGTGGGCCTGATTCGTACCGCCATGGGTGAGCCGGGGCCGGATGGTCGCCGTCGTCCTCGTCCGGTAGCGGGTTCAGAGTTTGAATTGCCCGCCGATGTTCTGATTATGGCCTTTGGTTTCCAGGCGCATGCCATGCCGTGGTTGCAGGGCAGCGGAATTAAACTCGATAAATGGGGCCTGATTCAAACCGGTGACGTCGGGTATTTACCTACCCAGACGCATCTGAAAAAAGTCTTTGCTGGTGGTGATGCAGTTCATGGCGCGGATCTGGTTGTCACTGCAATGGCCGCAGGAAGGCAGGCGGCGCGCGATATGTTAACTCTGTTTGATACGAAGGCATCGTGA", 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"protein_translation_length": 639, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009478" + ], + [ + "gene_synonym", + "ECK2883" + ], + [ + "gene_synonym", + "EcoGene:EG13071" + ], + [ + "gene_synonym", + "GI:90111510" + ], + [ + "gene_synonym", + "GeneID:949017" + ], + [ + "gene_synonym", + "JW5470" + ], + [ + "gene_synonym", + "NP_417364.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46821" + ], + [ + "gene_synonym", + "b2888" + ], + [ + "gene_synonym", + "uacT" + ], + [ + "gene_synonym", + "ygfU" + ] + ], + "dna_sequence": 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"type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009534" + ], + [ + "gene_synonym", + "ECK2899" + ], + [ + "gene_synonym", + "EcoGene:EG10371" + ], + [ + "gene_synonym", + "GI:16130806" + ], + [ + "gene_synonym", + "GeneID:947393" + ], + [ + "gene_synonym", + "JW2872" + ], + [ + "gene_synonym", + "NP_417380.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6T9" + ], + [ + "gene_synonym", + "b2904" + ], + [ + "gene_synonym", + "gcvH" + ] + ], + "dna_sequence": "ATGAGCAACGTACCAGCAGAACTGAAATACAGCAAAGAACACGAATGGCTGCGTAAAGAAGCCGACGGCACTTACACCGTTGGTATTACCGAACATGCTCAGGAGCTGTTAGGCGATATGGTGTTTGTTGACCTGCCGGAAGTGGGCGCAACGGTTAGCGCGGGCGATGACTGCGCGGTTGCCGAATCGGTAAAAGCGGCGTCAGACATTTATGCGCCAGTAAGCGGTGAAATCGTGGCGGTAAACGACGCACTGAGCGATTCCCCGGAACTGGTGAACAGCGAACCGTATGCAGGCGGCTGGATCTTTAAAATCAAAGCCAGCGATGAAAGCGAACTGGAATCACTGCTGGATGCGACCGCATACGAAGCATTGTTAGAAGACGAGTAA", + "dna_sequence_length": 390, + "functions": [ + "glycine cleavage complex lipoylprotein" + ], + "id": 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"GI:16130808" + ], + [ + "gene_synonym", + "GeneID:947389" + ], + [ + "gene_synonym", + "JW2874" + ], + [ + "gene_synonym", + "NP_417382.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25535" + ], + [ + "gene_synonym", + "b2906" + ], + [ + "gene_synonym", + "ubiI" + ], + [ + "gene_synonym", + "visC" + ] + ], + "dna_sequence": "ATGCAAAGTGTTGATGTAGCCATTGTTGGCGGCGGCATGGTGGGGCTGGCGGTTGCCTGTGGCTTACAGGGGAGCGGCTTACGCGTTGCCGTACTGGAGCAGCGCGTACAGGAACCTCTGGCGGCGAATGCACCACCACAACTGCGCGTTTCGGCTATCAATGCCGCCAGCGAAAAATTACTCACCCGTCTTGGCGTCTGGCAGGACATTCTCTCTCGTAGGGCCAGCTGTTATCACGGTATGGAAGTGTGGGACAAAGACAGCTTTGGTCACATTTCGTTTGACGATCAAAGCATGGGCTATAGCCATCTTGGGCATATCGTTGAAAATTCAGTGATTCACTACGCGCTGTGGAACAAAGCGCATCAGTCGTCAGATATCACTCTGTTAGCCCCCGCAGAATTACAGCAGGTCGCCTGGGGAGAAAATGAAACCTTCCTGACGCTGAAAGATGGCAGCATGTTAACGGCGCGTCTGGTGATTGGCGCGGACGGCGCTAATTCCTGGTTGCGCAACAAAGCCGATATTCCGCTGACTTTCTGGGATTATCAGCATCACGCGCTGGTAGCGACCATTCGCACGGAAGAACCGCATGATGCGGTGGCGCGGCAGGTTTTCCATGGCGAAGGCATTCTGGCCTTTTTACCGCTTAGCGATCCGCATCTTTGCTCGATTGTCTGGTCACTGTCGCCAGAGGAAGCGCAGCGGATGCAGCAGGCAAGTGAAGACGAATTTAATCGCGCGTTAAATATCGCTTTTGATAATCGCCTGGGCTTATGCAAGGTTGAGAGCGCGCGTCAGGTGTTCCCACTGACGGGGCGTTATGCGCGCCAGTTTGCCTCGCACCGTCTGGCGCTGGTGGGCGACGCCGCACATACCATTCACCCGCTGGCGGGGCAGGGGGTAAATCTCGGCTTTATGGATGCTGCAGAGCTGATTGCCGAACTGAAACGGTTGCATCGTCAGGGGAAAGACATCGGGCAGTACATTTATCTGCGTCGCTATGAGCGTAGCCGCAAGCACAGTGCGGCGTTGATGCTGGCTGGTATGCAGGGATTCCGCGATCTGTTTTCCGGTACCAATCCGGCGAAAAAACTGCTGCGTGATATTGGTTTGAAACTGGCCGACACGCTTCCTGGCGTTAAGCCGCAACTTATCCGCCAGGCAATGGGATTAAACGATTTGCCTGAATGGCTGCGTTAA", 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"gene_synonym", + "GeneID:947388" + ], + [ + "gene_synonym", + "JW2875" + ], + [ + "gene_synonym", + "NP_417383.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25534" + ], + [ + "gene_synonym", + "acd" + ], + [ + "gene_synonym", + "b2907" + ], + [ + "gene_synonym", + "ubiH" + ], + [ + "gene_synonym", + "visB" + ] + ], + "dna_sequence": 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"GeneID:947412" + ], + [ + "gene_synonym", + "JW2885" + ], + [ + "gene_synonym", + "NP_417393.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27254" + ], + [ + "gene_synonym", + "argK" + ], + [ + "gene_synonym", + "b2918" + ], + [ + "gene_synonym", + "meaB" + ], + [ + "gene_synonym", + "scpK?" + ], + [ + "gene_synonym", + "ygfD" + ] + ], + "dna_sequence": "ATGATTAATGAAGCCACGCTGGCAGAAAGTATTCGCCGCTTACGTCAGGGTGAGCGTGCCACACTCGCCCAGGCCATGACGCTGGTGGAAAGCCGTCACCCGCGTCATCAGGCACTAAGTACGCAGCTGCTTGATGCCATTATGCCGTACTGCGGTAACACCCTGCGACTGGGCGTTACCGGCACCCCCGGCGCGGGGAAAAGTACCTTTCTTGAGGCCTTTGGCATGTTGTTGATTCGAGAGGGATTAAAGGTCGCGGTTATTGCGGTCGATCCCAGCAGCCCGGTCACTGGCGGTAGCATTCTCGGGGATAAAACCCGCATGAATGACCTGGCGCGTGCCGAAGCGGCGTTTATTCGCCCGGTACCATCCTCCGGTCATCTGGGCGGTGCCAGTCAGCGAGCGCGGGAATTAATGCTGTTATGCGAAGCAGCGGGTTATGACGTAGTGATTGTCGAAACGGTTGGCGTCGGGCAGTCGGAAACAGAAGTCGCCCGCATGGTGGACTGTTTTATCTCGTTGCAAATTGCCGGTGGCGGCGATGATCTGCAGGGCATTAAAAAAGGGCTGATGGAAGTGGCTGATCTGATCGTTATCAACAAAGACGATGGCGATAACCATACCAATGTCGCCATTGCCCGGCATATGTACGAGAGTGCCCTGCATATTCTGCGACGTAAATACGACGAATGGCAGCCACGGGTTCTGACTTGTAGCGCACTGGAAAAACGTGGAATCGATGAGATCTGGCACGCCATCATCGACTTCAAAACCGCGCTAACTGCCAGTGGTCGTTTACAACAAGTGCGGCAACAACAATCGGTGGAATGGCTGCGTAAGCAGACCGAAGAAGAAGTACTGAATCACCTGTTCGCGAATGAAGATTTCGATCGCTATTACCGCCAGACGCTTTTAGCGGTCAAAAACAATACGCTCTCACCGCGCACCGGCCTGCGGCAGCTCAGTGAATTTATCCAGACGCAATATTTTGATTAA", 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"gene_synonym", + "NP_417394.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52045" + ], + [ + "gene_synonym", + "b2919" + ], + [ + "gene_synonym", + "mmcD" + ], + [ + "gene_synonym", + "scpB" + ], + [ + "gene_synonym", + "ygfG" + ] + ], + "dna_sequence": 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"1a5e2cdf5e3254b25da96ffd04a9af5e", + "parent_gene": "", + "protein_md5": "0e95d9058728eda4dbe930caf65005d8", + "protein_translation": "MSYQYVNVVTINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNFVGH", + "protein_translation_length": 261, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009583" + ], + [ + "gene_synonym", + "ECK2916" + ], + [ + "gene_synonym", + "EcoGene:EG12973" + ], + [ + "gene_synonym", + "GI:16130821" + ], + [ + "gene_synonym", + "GeneID:947402" + ], + [ + "gene_synonym", + "JW2887" + ], + [ + "gene_synonym", + "NP_417395.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52043" + ], + [ + "gene_synonym", + "b2920" + ], + [ + "gene_synonym", + "scpC" + ], + [ + "gene_synonym", + "ygfH" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG12974" + ], + [ + "gene_synonym", + "GI:90111513" + ], + [ + "gene_synonym", + "GeneID:947401" + ], + [ + "gene_synonym", + "JW5476" + ], + [ + "gene_synonym", + "NP_417396.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52044" + ], + [ + "gene_synonym", + "b2921" + ], + [ + "gene_synonym", + "ygfI" + ] + ], + "dna_sequence": 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], + "id": "CDS_2878", + "location": [ + [ + "NC_000913", + 3067173, + "-", + 897 + ] + ], + "md5": "33613cb70284e4f5cc424e6aac10de25", + "parent_gene": "", + "protein_md5": "bb1cfad3d3e7451672c6ce09a6c4bbde", + "protein_translation": "MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH", + "protein_translation_length": 298, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009588" + ], + [ + "gene_synonym", + "ECK2918" + ], + [ + "gene_synonym", + "EcoGene:EG11244" + ], + [ + "gene_synonym", + "GI:16130823" + ], + [ + "gene_synonym", + "GeneID:947398" + ], + [ + "gene_synonym", + "JW2889" + ], + [ + "gene_synonym", + "NP_417397.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADS6" + ], + [ + "gene_synonym", + "b2922" + ], + [ + "gene_synonym", + "yggE" + ] + ], + "dna_sequence": "GTGAAGTTCAAAGTTATCGCCCTGGCGGCATTAATGGGTATTAGCGGGATGGCAGCGCAGGCTAACGAATTGCCGGATGGACCGCATATTGTCACCTCCGGTACGGCAAGCGTGGATGCGGTGCCAGACATTGCCACTCTTGCGATTGAAGTTAACGTGGCCGCGAAGGATGCCGCTACTGCCAAGAAACAGGCAGATGAGCGCGTCGCACAATACATTTCCTTCCTTGAACTCAATCAGATCGCGAAAAAAGATATCAGCTCAGCGAACTTACGCACCCAGCCAGATTATGATTATCAGGATGGTAAAAGTATCCTTAAAGGCTACCGCGCTGTGAGAACGGTGGAAGTCACGCTCCGTCAGTTAGACAAACTGAATTCCTTGCTGGATGGCGCGCTGAAGGCGGGTCTTAACGAAATTCGTTCTGTGTCGCTGGGCGTGGCGCAGCCGGATGCCTATAAAGACAAAGCGCGTAAGGCAGCGATTGATAACGCGATTCATCAGGCGCAGGAACTGGCGAACGGCTTTCATCGTAAACTGGGGCCGGTATATAGCGTGCGCTACCATGTTTCCAACTATCAGCCCAGCCCAATGGTGCGGATGATGAAAGCCGATGCCGCGCCGGTGTCCGCCCAGGAAACTTACGAGCAGGCCGCTATTCAGTTTGATGATCAGGTCGATGTGGTCTTCCAGTTAGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAA", + "dna_sequence_length": 741, + "functions": [ + "oxidative stress defense protein" + ], + "id": "CDS_2879", + "location": [ + [ + "NC_000913", + 3068080, + "-", + 741 + ] + ], + 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3079330, + "-", + 444 + ] + ], + "md5": "413278807ff6fec5c08db355bddfd37a", + "parent_gene": "", + "protein_md5": "69bb77a7a3d14d6a6f90fb3064cadc4e", + "protein_translation": "MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQAIKDSTINNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGVYFPGNDEPIKLLIGLSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISRG", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009625" + ], + [ + "gene_synonym", + "ECK2930" + ], + [ + "gene_synonym", + "EcoGene:EG11427" + ], + [ + "gene_synonym", + "GI:49176286" + ], + [ + "gene_synonym", + "GeneID:947420" + ], + [ + "gene_synonym", + "JW5478" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27302" + ], + [ + "gene_synonym", + "YP_026188.1" + ], + [ + "gene_synonym", + "b2935" + ], + [ + "gene_synonym", + "tkt" + ], + [ + "gene_synonym", + "tktA" + ] + ], + "dna_sequence": 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"MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDFLKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMMEGISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQLGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMPSDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVERQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVAAYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVGLNGAIVGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL", + "protein_translation_length": 663, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009629" + ], + [ + "gene_synonym", + "ECK2931" + ], + [ + "gene_synonym", + "EcoGene:EG11291" + ], + [ + "gene_synonym", + "GI:90111514" + ], + [ + "gene_synonym", + "GeneID:945173" + ], + [ + "gene_synonym", + "JW2903" + 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"gene_synonym", + "NP_417426.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67080" + ], + [ + "gene_synonym", + "b2951" + ], + [ + "gene_synonym", + "yggS" + ] + ], + "dna_sequence": "ATGAACGATATTGCGCATAACCTGGCACAGGTCCGGGACAAAATCTCAGCGGCTGCAACGCGTTGCGGCCGTTCTCCAGAAGAAATTACGCTGCTTGCAGTCAGTAAAACAAAACCTGCGAGCGCCATCGCAGAAGCCATTGATGCCGGGCAGCGTCAATTTGGTGAAAACTACGTTCAGGAAGGGGTAGATAAAATTCGCCACTTTCAGGAACTGGGCGTAACAGGATTAGAATGGCATTTTATTGGCCCGTTGCAGTCTAATAAAAGCCGCCTGGTGGCAGAGCATTTCGACTGGTGTCATACCATCGACCGTTTGCGCATCGCTACCCGTCTCAACGACCAGCGCCCGGCAGAACTTCCCCCTCTTAACGTTCTGATTCAAATTAACATTAGTGATGAAAACAGTAAGTCCGGGATTCAACTGGCTGAACTGGACGAGCTGGCAGCTGCGGTCGCTGAACTACCGCGTTTACGTCTGCGCGGGTTGATGGCAATCCCTGCGCCTGAGTCAGAATATGTAAGGCAGTTTGAAGTTGCACGCCAAATGGCTGTAGCATTTGCCGGACTGAAAACGCGCTACCCGCATATCGACACGCTCTCTCTGGGAATGTCGGACGATATGGAAGCCGCCATTGCGGCAGGTAGCACGATGGTTCGTATCGGCACTGCAATTTTTGGTGCGCGTGATTACTCTAAAAAATAA", + "dna_sequence_length": 705, + "functions": [ + "UPF0001 family protein, PLP-binding" + ], + "id": 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"gene_synonym", + "GeneID:947473" + ], + [ + "gene_synonym", + "JW2944" + ], + [ + "gene_synonym", + "NP_417451.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEQ1" + ], + [ + "gene_synonym", + "b2977" + ], + [ + "gene_synonym", + "glcG" + ], + [ + "gene_synonym", + "yghC" + ] + ], + "dna_sequence": "ATGAAAACTAAAGTCATTCTTAGCCAGCAAATGGCGAGTGCAATTATTGCCGCAGGTCAGGAAGAGGCGCAGAAAAATAACTGGTCTGTTTCCATTGCTGTTGCCGATGACGGCGGTCATCTGCTGGCGTTAAGTCGCATGGACGATTGCGCGCCGATTGCGGCTTATATCTCCCAGGAGAAAGCGCGTACCGCCGCGCTGGGGCGTCGTGAAACTAAGGGCTATGAAGAGATGGTGAACAACGGACGTACCGCGTTCGTGACTGCGCCGTTATTAACGTCGCTGGAAGGCGGCGTACCGGTTGTTGTGGATGGGCAAATTATTGGTGCCGTGGGCGTTTCTGGTTTAACCGGAGCACAGGATGCGCAGGTCGCGAAAGCGGCAGCAGCGGTGTTGGCGAAATAA", + "dna_sequence_length": 405, + "functions": [ + "DUF336 family protein" + ], + "id": "CDS_2930", + "location": [ + [ + "NC_000913", + 3124231, + "-", + 405 + ] + ], + "md5": "b5dd0656fcbbe786933292ca64ea6e72", + "parent_gene": "", + "protein_md5": 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"GI:49176295" + ], + [ + "gene_synonym", + "GeneID:2847718" + ], + [ + "gene_synonym", + "JW5487" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P52073" + ], + [ + "gene_synonym", + "YP_026191.1" + ], + [ + "gene_synonym", + "b4468" + ], + [ + "gene_synonym", + "glcE" + ], + [ + "gene_synonym", + "gox" + ], + [ + "gene_synonym", + "yghL" + ] + ], + "dna_sequence": 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"ATGTCTCATTTAAAAGACCCGACCACGCAGTATTACACTGGTGAATATCCCAAACAGAAACAACCGACGCCAGGCATCCAGGCGAAGATGACACCGGTACCGGATTGCGGCGAGAAAACCTATGTTGGTAGCGGTCGCCTGAAAGATCGTAAAGCACTGGTGACAGGGGGCGATTCCGGAATAGGTCGCGCTGCCGCCATCGCTTACGCGCGTGAAGGGGCTGACGTGGCGATCAGTTATCTTCCCGTGGAAGAAGAAGACGCTCAGGATGTGAAAAAGATCATTGAAGAATGCGGACGCAAAGCCGTTCTGCTGCCAGGCGATTTAAGCGATGAGAAATTTGCCCGTTCGCTGGTTCACGAAGCGCACAAGGCGTTAGGCGGGCTGGATATTATGGCGCTGGTCGCCGGGAAACAGGTTGCCATTCCGGATATTGCAGACCTCACCAGCGAACAGTTTCAAAAGACCTTTGCCATTAACGTTTTCGCGCTGTTCTGGCTAACCCAGGAAGCGATCCCCCTGCTACCGAAAGGTGCAAGTATCATCACCACTTCGTCAATCCAGGCATACCAGCCAAGTCCGCATTTACTGGACTATGCGGCTACGAAGGCGGCGATTCTGAACTACAGCCGTGGCTTGGCAAAACAGGTCGCGGAGAAAGGTATTCGGGTGAATATTGTCGCGCCAGGCCCGATCTGGACAGCACTGCAAATTTCCGGCGGACAAACGCAGGATAAGATCCCGCAGTTTGGTCAGCAAACGCCGATGAAACGTGCGGGGCAACCGGCGGAACTGGCCCCTGTATATGTTTATCTGGCAAGTCAGGAGTCGAGCTACGTCACCGCAGAAGTGCACGGCGTGTGCGGCGGCGAGCATTTAGGTTAA", + "dna_sequence_length": 885, + "functions": [ + "putative oxidoreductase" + ], + "id": "CDS_2956", + 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"gene_synonym", + "exbD" + ] + ], + "dna_sequence": "ATGGCAATGCATCTTAACGAAAACCTCGACGATAACGGCGAAATGCATGATATCAACGTGACGCCGTTTATCGACGTGATGTTGGTTCTGCTGATTATCTTTATGGTGGCGGCACCGTTAGCGACGGTAGATGTGAAGGTGAACTTGCCTGCTTCTACCAGCACGCCGCAGCCGCGCCCGGAAAAACCGGTTTATCTGTCGGTGAAGGCAGACAACTCGATGTTTATCGGTAACGATCCGGTCACCGATGAAACAATGATTACGGCGTTGAATGCGTTAACCGAAGGCAAGAAAGACACCACCATCTTCTTCCGAGCGGACAAAACCGTCGATTACGAGACGTTGATGAAGGTAATGGATACGCTGCATCAGGCGGGTTACCTGAAGATAGGTCTGGTCGGCGAAGAAACCGCCAAAGCGAAGTAA", + "dna_sequence_length": 426, + "functions": [ + "membrane spanning protein in TonB-ExbB-ExbD complex" + ], + "id": "CDS_2957", + "location": [ + [ + "NC_000913", + 3151243, + "-", + 426 + ] + ], + "md5": "2faa697807e663612135066223c04abe", + "parent_gene": "", + "protein_md5": "01253ca20e74209bc3ba1c7febf7acff", + "protein_translation": "MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVDVKVNLPASTSTPQPRPEKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEETAKAK", + "protein_translation_length": 141, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009869" + ], + [ + "gene_synonym", + "ECK2999" + ], + [ + "gene_synonym", + "EcoGene:EG10271" + ], + [ + "gene_synonym", + "GI:16130904" + ], + [ + "gene_synonym", + "GeneID:945420" + ], + [ + "gene_synonym", + "JW2974" + ], + [ + "gene_synonym", + "NP_417479.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABU7" + ], + [ + "gene_synonym", + "b3006" + ], + [ + "gene_synonym", + "exbB" + ] + ], + "dna_sequence": "GTGGGTAATAATTTAATGCAGACGGACCTTTCCGTCTGGGGTATGTATCAGCACGCCGATATTGTCGTTAAGTGCGTGATGATTGGGCTTATTTTGGCCTCCGTAGTCACCTGGGCAATCTTCTTCAGTAAGAGCGTAGAGTTCTTCAATCAGAAGCGTCGCCTTAAGCGCGAGCAGCAACTGCTGGCTGAAGCGCGTTCCTTAAACCAGGCCAACGATATCGCCGCTGATTTTGGTAGCAAAAGCTTAAGCCTGCATTTGCTCAATGAAGCGCAGAATGAGCTGGAACTGTCAGAAGGCAGCGACGATAACGAAGGTATTAAAGAACGTACCAGCTTCCGTCTGGAGCGTCGGGTCGCCGCAGTGGGTCGTCAAATGGGCCGCGGTAACGGCTATCTGGCAACCATCGGCGCGATTTCTCCGTTCGTTGGTCTGTTTGGTACGGTCTGGGGCATCATGAACAGCTTTATTGGTATCGCGCAAACGCAGACCACTAACCTGGCAGTCGTTGCGCCGGGTATCGCAGAAGCTCTGTTAGCAACGGCAATCGGCCTCGTGGCAGCGATTCCTGCGGTCGTTATCTATAACGTATTTGCACGCCAGATTGGCGGCTTTAAAGCGATGCTGGGTGATGTTGCAGCGCAGGTATTGTTGCTGCAAAGCCGTGACCTGGATCTGGAAGCCAGCGCCGCTGCGCATCCGGTTCGTGTCGCACAAAAATTACGCGCAGGATAA", + "dna_sequence_length": 735, + "functions": [ + "membrane spanning protein in TonB-ExbB-ExbD complex" + ], + "id": "CDS_2958", + "location": [ + [ + "NC_000913", + 3151984, + "-", + 735 + ] + ], + "md5": "bfe6dd210a428b6246115546c28f75ae", + "parent_gene": "", 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"gene_synonym", + "GeneID:947490" + ], + [ + "gene_synonym", + "JW2976" + ], + [ + "gene_synonym", + "NP_417482.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AA60" + ], + [ + "gene_synonym", + "b3009" + ], + [ + "gene_synonym", + "yghB" + ] + ], + "dna_sequence": "ATGGCTGTTATTCAAGATATCATCGCTGCGCTCTGGCAACACGACTTTGCCGCGCTGGCGGATCCTCATATTGTTAGCGTTGTTTACTTTGTCATGTTTGCCACGCTGTTTTTAGAAAACGGCCTGCTGCCCGCCTCATTTTTGCCAGGCGACAGCTTGTTGATACTGGCAGGCGCATTGATTGCCCAGGGGGTTATGGATTTTCTGCCTACGATTGCGATTCTGACCGCCGCAGCAAGTCTGGGCTGCTGGCTAAGTTATATTCAGGGGCGCTGGTTAGGGAATACCAAAACGGTGAAAGGCTGGCTGGCACAGCTTCCTGCTAAATATCACCAGCGCGCCACCTGCATGTTTGACCGCCACGGTCTGCTGGCGCTGCTGGCTGGACGTTTTCTTGCATTTGTCCGTACGCTGCTGCCAACCATGGCGGGAATTTCCGGTCTGCCAAACCGCCGCTTCCAGTTTTTCAACTGGTTAAGTGGATTGCTGTGGGTCAGCGTGGTAACCAGTTTTGGCTATGCCTTAAGTATGATTCCGTTCGTTAAACGCCATGAAGATCAGGTAATGACGTTCCTGATGATCCTGCCAATTGCCTTGTTAACCGCTGGCTTGTTAGGCACGCTGTTTGTGGTGATTAAAAAAAAATACTGTAACGCCTGA", + "dna_sequence_length": 660, + "functions": [ + "general envelope maintenance protein", + "DedA family inner membrane protein", + "putative multidrug efflux transporter" + ], + "id": "CDS_2960", + "location": [ + [ + "NC_000913", + 3153563, + "+", + 660 + ] + ], + "md5": "67608b3f6286d28d065ffe372264d69f", + "parent_gene": "", + "protein_md5": "41cd95fed8352133b976830ca3ed6a6f", + "protein_translation": "MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLPASFLPGDSLLILAGALIAQGVMDFLPTIAILTAAASLGCWLSYIQGRWLGNTKTVKGWLAQLPAKYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLSGLLWVSVVTSFGYALSMIPFVKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKKYCNA", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009884" + ], + [ + "gene_synonym", + "ECK3002" + ], + [ + "gene_synonym", + "EcoGene:EG13013" + ], + [ + "gene_synonym", + "GI:90111526" + ], + [ + "gene_synonym", + "GeneID:947491" + ], + [ + "gene_synonym", + "JW5849" + ], + [ + "gene_synonym", + "NP_417483.2" + ], + [ + "gene_synonym", + 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"UniProtKB/Swiss-Prot:P65298" + ], + [ + "gene_synonym", + "b3014" + ], + [ + "gene_synonym", + "yqhH" + ] + ], + "dna_sequence": "ATGAAAACGATTTTCACCGTGGGAGCTGTTGTTCTGGCAACCTGCTTGCTCAGTGGCTGCGTCAATGAGCAAAAGGTCAATCAGCTGGCGAGCAATGTGCAAACATTAAATGCCAAAATCGCCCGGCTTGAGCAGGATATGAAAGCACTACGCCCACAAATCTATGCTGCCAAATCCGAAGCTAACAGAGCCAATACGCGTCTTGATGCTCAGGACTATTTTGATTGCCTGCGCTGCTTGCGTATGTACGCAGAATGA", + "dna_sequence_length": 258, + "functions": [ + "outer membrane lipoprotein, Lpp paralog" + ], + "id": "CDS_2965", + "location": [ + [ + "NC_000913", + 3158627, + "+", + 258 + ] + ], + "md5": "429a63b3b6a3bad3b0645062384ba0b7", + "parent_gene": "", + "protein_md5": "6785684b497f6352952536f341ce094f", + "protein_translation": "MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLEQDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCLRMYAE", + "protein_translation_length": 85, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174099" + ], + [ + "gene_synonym", + "ECK3007" + ], + [ + "gene_synonym", + "EcoGene:EG13019" + ], + [ + "gene_synonym", + "GI:49176302" + ], + [ + "gene_synonym", + "GeneID:948963" + ], + [ + "gene_synonym", + "JW5501" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46861" + ], + [ + "gene_synonym", + "YP_026196.1" + ], + [ + "gene_synonym", + "b4469" + ], + [ + "gene_synonym", + "ygiQ" + ], + [ + "gene_synonym", + "ygiR" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK3009" + ], + [ + "gene_synonym", + "EcoGene:EG11377" + ], + [ + "gene_synonym", + "GI:16130914" + ], + [ + "gene_synonym", + "GeneID:947496" + ], + [ + "gene_synonym", + "JW2986" + ], + [ + "gene_synonym", + "NP_417490.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P26647" + ], + [ + "gene_synonym", + "b3018" + ], + [ + "gene_synonym", + "parF" + ], + [ + "gene_synonym", + "plsC" + ] + ], + "dna_sequence": 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"GI:16130916" + ], + [ + "gene_synonym", + "GeneID:947140" + ], + [ + "gene_synonym", + "JW2988" + ], + [ + "gene_synonym", + "NP_417492.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46863" + ], + [ + "gene_synonym", + "b3020" + ], + [ + "gene_synonym", + "ygiS" + ] + ], + "dna_sequence": 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"MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS", + "protein_translation_length": 217, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0009987" + ], + [ + "gene_synonym", + "ECK3033" + ], + [ + "gene_synonym", + "EcoGene:EG13031" + ], + [ + "gene_synonym", + "GI:90111530" + ], + [ + "gene_synonym", + "GeneID:947524" + ], + [ + "gene_synonym", + "JW5505" + ], + [ + "gene_synonym", + "NP_417514.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:Q46868" + ], + [ + "gene_synonym", + "b3042" + ], + [ + "gene_synonym", + "yqiC" + ] + ], + "dna_sequence": 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"GeneID:947522" + ], + [ + "gene_synonym", + "JW3011" + ], + [ + "gene_synonym", + "NP_417515.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39834" + ], + [ + "gene_synonym", + "b3043" + ], + [ + "gene_synonym", + "ygiL" + ] + ], + "dna_sequence": "ATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTATTAAACCAGGTGACGAAGATTTAACTGTAAATCTGGGTGAAGTAGCAGATACCGTACTGAAAAGCGATCAGAAATCTTTGGCTGAACCTTTCACTATTCACCTGCAGGACTGCATGCTGAGTCAGGGTGGAACTACTTATTCAAAAGCGAAGGTTACTTTCACTACAGCAAATACCATGACGGGTCAGTCTGATCTTCTGAAAAATACCAAAGAAACTGAAATCGGCGGCGCCACTGGCGTTGGCGTACGTATTCTGGACAGCCAGAGCGGCGAAGTAACTTTAGGTACTCCGGTAGTAATTACGTTCAACAATACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAA", + "dna_sequence_length": 552, + "functions": [ + "putative fimbrial-like adhesin protein" + ], + "id": "CDS_2992", + "location": [ + [ + "NC_000913", + 3185414, + "+", + 552 + ] + ], + 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"gene_synonym", + "UniProtKB/Swiss-Prot:P06864" + ], + [ + "gene_synonym", + "YP_026199.1" + ], + [ + "gene_synonym", + "b3076" + ], + [ + "gene_synonym", + "ebgA" + ] + ], + "dna_sequence": 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"MSYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGRADEINTCIGCNQACLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTADQLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPNRALAQPLIDSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI", + "protein_translation_length": 672, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010126" + ], + [ + "gene_synonym", + "ECK3072" + ], + [ + "gene_synonym", + "EcoGene:EG12724" + ], + [ + "gene_synonym", + "GI:16130977" + ], + [ + "gene_synonym", + "GeneID:947593" + ], + [ + "gene_synonym", + "JW3053" + ], + [ + "gene_synonym", + "NP_417553.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67701" + ], + [ + "gene_synonym", + "b3082" + ], + [ + "gene_synonym", + "higA" + ], + [ + "gene_synonym", + "ygjM" + ] + ], + "dna_sequence": "ATGATTGCGATTGCCGACATCTTGCAAGCAGGAGAAAAGCTAACTGCTGTGGCACCTTTTCTGGCGGGTATTCAGAACGAGGAACAATACACCCAGGCGCTGGAACTGGTAGATCATCTGCTGCTCAACGATCCTGAAAACCCCTTGCTGGATCTGGTGTGTGCCAAAATAACCGCGTGGGAAGAATCAGCGCCCGAATTTGCGGAATTTAATGCCATGGCTCAAGCCATGCCTGGCGGTATAGCCGTGATTCGTACCCTTATGGATCAATATGGTTTAACCCTTTCCGATCTGCCGGAAATTGGCAGTAAATCTATGGTGTCACGCGTTTTGAGCGGGAAGAGGAAATTAACGCTGGAACACGCTAAAAAATTGGCAACGCGATTCGGCATTTCTCCCGCCTTGTTTATTGATTAA", + "dna_sequence_length": 417, + "functions": [ + "antitoxinof the HigB-HigA toxin-antitoxin system" + ], + "id": "CDS_3032", + "location": [ + [ + "NC_000913", + 3234144, + "-", + 417 + ] + ], + "md5": "81181b6e21249909808f2b55be2d54a6", + "parent_gene": "", + "protein_md5": "46394d8005da3d75cb3a9c4665a02bdc", + 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"gene_synonym", + "GI:90111535" + ], + [ + "gene_synonym", + "GeneID:947589" + ], + [ + "gene_synonym", + "JW5513" + ], + [ + "gene_synonym", + "NP_417555.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42596" + ], + [ + "gene_synonym", + "b3084" + ], + [ + "gene_synonym", + "rlmG" + ], + [ + "gene_synonym", + "rsmD" + ], + [ + "gene_synonym", + "ygjO" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:90111542" + ], + [ + "gene_synonym", + "GeneID:947624" + ], + [ + "gene_synonym", + "JW5521" + ], + [ + "gene_synonym", + "NP_417583.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGL2" + ], + [ + "gene_synonym", + "b3113" + ], + [ + "gene_synonym", + "tdcF" + ], + [ + "gene_synonym", + "yhaR" + ] + ], + "dna_sequence": "ATGAAAAAGATTATCGAAACGCAACGTGCCCCAGGCGCAATCGGCCCTTATGTTCAGGGCGTTGATTTAGGCAGCATGGTCTTCACCTCCGGGCAAATACCGGTTTGCCCACAGACCGGTGAGATCCCGGCTGATGTGCAAGATCAGGCGCGTTTAAGCCTCGAAAACGTCAAAGCGATCGTGGTTGCTGCCGGGCTGAGCGTGGGCGATATCATCAAGATGACCGTGTTTATCACCGATCTGAATGATTTTGCCACCATCAACGAAGTCTATAAGCAGTTCTTCGATGAGCATCAGGCGACCTATCCGACCCGGAGCTGTGTGCAGGTCGCGCGTTTGCCGAAAGATGTGAAGCTGGAAATTGAAGCCATCGCAGTACGTAGTGCGTAA", + "dna_sequence_length": 390, + "functions": [ + "putative reactive intermediate deaminase" + ], + "id": "CDS_3061", + "location": [ + [ + "NC_000913", + 3260110, + "-", + 390 + ] + ], + "md5": "93c83ad1545ab3ccbedff787eef8c2c1", + "parent_gene": "", + "protein_md5": "806d23732eecf3a07d4a5478b9c46f34", + "protein_translation": "MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPADVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAIAVRSA", + "protein_translation_length": 129, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010242" + ], + [ + "gene_synonym", + "ECK3103" + ], + [ + "gene_synonym", + "EcoGene:EG12758" + ], + [ + "gene_synonym", + "GI:49176316" + ], + [ + "gene_synonym", + "GeneID:947623" + ], + [ + "gene_synonym", + "JW5522" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P42632" + ], + [ + "gene_synonym", + "YP_026205.1" + ], + [ + "gene_synonym", + "b3114" + ], + [ + "gene_synonym", + "tdcE" + ], + [ + "gene_synonym", + "yhaS" + ] + ], + "dna_sequence": 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540 + ] + ], + "md5": "3adf1003c46653fe307dbe0f381c4744", + "parent_gene": "", + "protein_md5": "1bd6f061a4480e50acdf6f79fcdf1b5d", + "protein_translation": "MKGFPIAHIFHPSIPPMHAVVNNHNRNIDYWTVKRKFAEIVSTNDVNKIYSISNELRRVLSAITALNFYHGDVPSVMIRIQPENMSPFIIDISTGEHDDYIIQTLDVGTFAPFGEQCTCSAVNKKELECIKETISKYCAKFTRKEAILTPLVHFNKTSITSDCWQILFFSPDHFNNDFY", + "protein_translation_length": 179, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010263" + ], + [ + "gene_synonym", + "ECK3110" + ], + [ + "gene_synonym", + "EcoGene:EG11174" + ], + [ + "gene_synonym", + "GI:16131014" + ], + [ + "gene_synonym", + "GeneID:947557" + ], + [ + "gene_synonym", + "JW3092" + ], + [ + "gene_synonym", + "NP_417591.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11864" + ], + [ + "gene_synonym", + "b3121" + ], + [ + "gene_synonym", + "yhaC" + ] + ], + "dna_sequence": 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] + ], + "dna_sequence": 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"ATGCCACAACGACACCACCAGGGACATAAACGCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAAGTGGTATGCAAACAACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAACTTATCAGGTTGATATCTGGCTGAATAAAAAGAAGGTTTCACAGAAAAAAATTACATTTACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCACTGTACCGTGATGCAAGAGGTTACGTCTCCCCTTCTCGTTGGGACGATGGTATACCAACGCTGTTTACCAACTACTCGTTTACAGGTTCTGATAACCGTTACCGCCAGGGCAATCGTAGCCAACGACAGTACCTGAATATGCAAAATGGTGCTAATTTTGGCCCCTGGCGATTACGCAACTATTCCACATGGACACGCAACGATCAGACATCAAGCTGGAATACCATCAGTAGTTATTTACAACGTGATATCAAGGCGTTGAAGTCTCAGTTGCTTCTGGGAGAAAGCGCCACCAGCGGCAGTATTTTTTCCAGCTACACCTTTACTGGCGTGCAACTCGCTTCCGACGATAATATGTTGCCAAACAGCCAGCGCGGATTTGCCCCAACGGTACGCGGTATCGCAAACAGTAGTGCAATCGTGACTATCAGGCAAAATGGTTATGTGATCTATCAAAGCAACGTGTCAGCGGGTGCCTTTGAAATTAACGATCTCTACCCCTCTTCCAACAGCGGCGATTTAGAAGTCACGATTGAAGAAAGTGACGGTACACAACGTCGCTTTATCCAGCCTTATTCTTCATTACCCATGATGCAGCGACCTGGGCATCTAAAGTATAGCGCGACCGCTGGACGCTATCGCGCTGATGCAAACAGTGATAGCAAGGAACCCGAATTTGCTGAAGCCACGGCAATATATGGTTTGAATAATACTTTTACGCTGTATGGCGGCCTGCTCGGTTCTGAAGATTATTATGCGCTGGGGATCGGTATCGGCGGCACACTTGGCGCACTGGGCGCGTTGTCGATGGATATCAACAGAGCTGACACCCAATTCGATAACCAGCACTCTTTTCATGGCTATCAATGGCGTACGCAGTACATCAAAGATATCCCGGAAACCAACACCAATATCGCTGTCAGCTACTATCGCTATACCAACGATGGCTATTTTAGTTTTAATGAAGCCAATACCCGCAATTGGGACTATAACAGTCGCCAAAAAAGTGAAATTCAATTCAACATCAGCCAGACAATATTTGATGGGGTAAGTCTGTATGCCTCCGGTTCGCAGCAAGACTATTGGGGCAATAACGATAAAAACAGGAATATCTCTGTTGGGGTTTCCGGCCAGCAATGGGGAGTTGGTTACAGCCTGAATTATCAATACAGCCGCTACACTGATCAAAATAATGACCGCGCACTCTCTTTGAATCTCAGTATTCCGTTAGAACGCTGGTTACCGCGTAGCCGGGTTTCCTATCAGATGACCAGCCAGAAAGATCGCCCAACCCAACATGAAATGCGTCTTGATGGCTCACTGCTGGATGATGGTCGCCTGAGCTATAGCCTGGAACAAAGTCTGGATGACGATAACAACCATAACAGTAGCCTGAACGCCAGTTACCGTTCACCTTATGGCACCTTCAGTGCCGGATACAGCTACGGTAATGACAGCAGCCAATACAATTACGGCGTTACCGGCGGCGTGGTTATCCATCCTCATGGCGTGACGCTCTCGCAATATCTGGGCAACGCTTTTGCGCTTATCGATGCTAACGGAGCATCTGGCGTGAGGATACAAAACTATCCGGGGATTGCTACCGATCCTTTTGGCTATGCAGTGGTTCCTTATCTCACAACTTATCAGGAAAACCGTCTCTCGGTAGATACTACGCAGCTGCCCGATAACGTCGATCTTGAACAAACAACACAGTTTGTGGTGCCCAACAGAGGTGCAATGGTAGCGGCGCGTTTCAACGCCAATATCGGTTATCGCGTACTTGTTACAGTCAGCGATCGCAACGGTAAACCGTTGCCCTTTGGCGCTCTTGCCAGCAACGATGATACGGGGCAACAAAGTATCGTCGATGAGGGCGGCATACTATATCTCTCTGGGATATCGAGTAAATCACAAAGCTGGACTGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAA", 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"MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYYFDPIMLETTKSGMQTTDLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQLLQPQFTVEQLRELGIKVDEIPALAEKDDDSVINSLEQIIPGTAAEFDFNHQQLNLSIPQIALYRDARGYVSPSRWDDGIPTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPWRLRNYSTWTRNDQTSSWNTISSYLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSSAIVTIRQNGYVIYQSNVSAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYSSLPMMQRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYGGLLGSEDYYALGIGIGGTLGALGALSMDINRADTQFDNQHSFHGYQWRTQYIKDIPETNTNIAVSYYRYTNDGYFSFNEANTRNWDYNSRQKSEIQFNISQTIFDGVSLYASGSQQDYWGNNDKNRNISVGVSGQQWGVGYSLNYQYSRYTDQNNDRALSLNLSIPLERWLPRSRVSYQMTSQKDRPTQHEMRLDGSLLDDGRLSYSLEQSLDDDNNHNSSLNASYRSPYGTFSAGYSYGNDSSQYNYGVTGGVVIHPHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPFGYAVVPYLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNRGAMVAARFNANIGYRVLVTVSDRNGKPLPFGALASNDDTGQQSIVDEGGILYLSGISSKSQSWTVRWGNQADQQCQFAFSTPDSEPTTSVLQGTAQCH", + "protein_translation_length": 838, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010335" + ], + [ + "gene_synonym", + "ECK3133" + ], + [ + "gene_synonym", + "EcoGene:EG12776" + ], + [ + "gene_synonym", + "GI:16131037" + ], + [ + "gene_synonym", + "GeneID:947654" + ], + [ + "gene_synonym", + "JW3114" + ], + [ + "gene_synonym", + "NP_417614.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P43319" + ], + [ + "gene_synonym", + "b3145" + ], + [ + "gene_synonym", + "yraK" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW3115" + ], + [ + "gene_synonym", + "NP_417615.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67087" + ], + [ + "gene_synonym", + "b3146" + ], + [ + "gene_synonym", + "rsmI" + ], + [ + "gene_synonym", + "yraL" + ] + ], + "dna_sequence": 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"ATGGTACCCTCAACATTTTCTCGTTTGAAAGCCGCGCGTTGTCTGCCTGTTGTTCTGGCAGCCCTGATTTTCGCCGGTTGTGGCACCCATACTCCCGATCAGTCCACTGCTTATATGCAGGGCACGGCGCAGGCTGATTCTGCCTTTTATCTTCAGCAGATGCAGCAAAGCTCTGATGATACCAGGATCAACTGGCAATTACTCGCCATTCGTGCACTGGTGAAAGAAGGTAAAACCGGGCAGGCGGTTGAGTTGTTTAACCAACTACCGCAAGAACTGAACGATGCTCAGCGTCGCGAGAAAACACTGCTGGCGGTAGAGATTAAACTGGCGCAGAAAGATTTTGCTGGCGCGCAAAACTTGCTGGCGAAAATCACACCTGCCGATTTAGAACAAAACCAGCAAGCGCGTTACTGGCAGGCAAAAATCGATGCCAGCCAGGGGCGTCCTTCCATTGATTTACTGCGCGCGTTAATTGCTCAGGAACCGCTGCTTGGCGCGAAAGAAAAACAGCAGAATATTGATGCCACCTGGCAGGCGCTCTCCTCCATGACTCAGGAACAGGCGAATACGCTGGTGATCAACGCCGACGAAAATATTCTGCAAGGCTGGCTGGATCTGCAGCGCGTCTGGTTTGATAACCGTAACGATCCCGACATGATGAAAGCCGGGATCGCCGACTGGCAGAAACGTTATCCGAACAATCCGGGCGCGAAAATGCTGCCAACGCAGTTGGTTAACGTAAAAGCGTTTAAACCAGCCTCGACCAACAAAATCGCCCTGCTGTTGCCACTGAATGGCCAGGCAGCGGTATTTGGTCGCACTATTCAGCAAGGCTTTGAAGCGGCGAAAAATATCGGCACTCAGCCAGTGGCAGCTCAGGTAGCTGCCGCACCTGCCGCAGACGTAGCTGAACAACCTCAGCCGCAAACCGTGGATGGCGTTGCCAGCCCGGCACAAGCCTCGGTTAGCGATCTGACCGGTGAACAGCCTGCAGCCCAGCCGGTGCCTGTAAGCGCCCCGGCGACAAGCACCGCAGCGGTAAGCGCACCCGCAAATCCATCCGCAGAGCTGAAAATCTACGATACCTCATCACAACCACTTAGCCAGATCTTAAGCCAGGTTCAGCAGGATGGCGCGAGTATTGTGGTCGGTCCGTTGCTGAAAAATAACGTTGAAGAGTTGCTGAAGAGCAACACTCCGCTGAACGTACTGGCACTGAACCAGCCGGAGAATATCGAAAATCGCGTCAATATTTGTTACTTCGCGCTTTCACCGGAAGACGAAGCGCGCGATGCAGCGCGTCATATTCGTGACCAGGGTAAACAAGCGCCGCTGGTGCTGATCCCACGCAGTTCATTGGGCGATCGCGTAGCCAATGCGTTTGCGCAAGAGTGGCAGAAACTGGGCGGCGGCACCGTTCTGCAACAAAAATTTGGTTCCACCAGCGAATTACGCGCGGGTGTTAACGGCGGTTCTGGTATTGCTTTAACGGGTAGCCCGATTACTCTCAGAGCGACAACCGACTCCGGCATGACGACCAACAATCCAACGCTGCAAACCACGCCAACCGATGACCAGTTCACCAATAATGGCGGTCGTGTCGATGCGGTGTACATTGTGGCAACGCCGGGTGAAATCGCTTTTATCAAACCGATGATCGCCATGCGTAACGGTAGCCAGAGCGGTGCAACGCTGTACGCCAGCTCCCGCAGTGCGCAAGGGACCGCTGGCCCGGATTTCCGACTGGAGATGGAAGGCTTGCAGTACAGCGAAATCCCGATGCTGGCAGGCGGTAATCTACCGTTAATGCAGCAGGCACTCAGCGCGGTGAATAACGATTATTCACTGGCTCGCATGTATGCGATGGGCGTCGATGCCTGGTCGCTGGCAAATCATTTCTCACAAATGCGCCAGGTTCAGGGTTTTGAAATCAACGGTAATACCGGAAGCCTGACGGCTAACCCGGATTGCGTGATTAACAGGAACTTATCATGGCTACAGTACCAACAAGGTCAGGTAGTCCCCGTCAGTTAA", 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"gene_synonym", + "JW3117" + ], + [ + "gene_synonym", + "NP_417617.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45465" + ], + [ + "gene_synonym", + "b3148" + ], + [ + "gene_synonym", + "yraN" + ] + ], + "dna_sequence": "ATGGCTACAGTACCAACAAGGTCAGGTAGTCCCCGTCAGTTAACCACCAAACAGACCGGCGATGCGTGGGAAGCACAAGCGCGTCGCTGGCTGGAAGGCAAAGGACTGCGGTTTATCGCCGCTAACGTGAACGAGCGTGGCGGCGAGATCGATCTGATAATGCGTGAAGGCCGGACCACCATTTTTGTCGAGGTACGCTATCGCCGCTCTGCGCTTTATGGCGGCGCGGCAGCCAGTGTGACCCGCAGCAAACAACACAAATTATTACAGACTGCCCGCTTGTGGCTCGCGCGTCATAATGGGAGTTTTGATACTGTGGATTGCCGGTTCGATGTGGTAGCCTTCACCGGGAATGAGGTTGAGTGGATTAAGGATGCCTTTAATGACCACTCATAA", + "dna_sequence_length": 396, + "functions": [ + "UPF0102 family protein" + ], + "id": "CDS_3094", + "location": [ + [ + "NC_000913", + 3295394, + "+", + 396 + ] + ], + "md5": "6d07582173b77b57a1cd8b5fbbb585f1", + "parent_gene": "", + "protein_md5": "e61d6c47f0c413069058deb6dcf035d8", + "protein_translation": "MATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVNERGGEIDLIMREGRTTIFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEWIKDAFNDHS", + "protein_translation_length": 131, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010348" + ], + [ + "gene_synonym", + "ECK3137" + ], + [ + "gene_synonym", + "EcoGene:EG12780" + ], + [ + "gene_synonym", + "GI:16131041" + ], + [ + "gene_synonym", + "GeneID:947661" + ], + [ + "gene_synonym", + "JW3118" + ], + [ + "gene_synonym", + "NP_417618.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P66817" + ], + [ + "gene_synonym", + "b3149" + ], + [ + "gene_synonym", + "diaA" + ], + [ + "gene_synonym", + "yraO" + ] + ], + "dna_sequence": 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"CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4500" + ], + [ + "gene_synonym", + "EcoGene:EG14490" + ], + [ + "gene_synonym", + "GI:226524750" + ], + [ + "gene_synonym", + "GeneID:7751619" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P618" + ], + [ + "gene_synonym", + "YP_002791258.1" + ], + [ + "gene_synonym", + "b4685" + ], + [ + "gene_synonym", + "yrbN" + ] + ], + "dna_sequence": "ATGAAAATTGCTGATCAATTTCATGATGAGTTATGTAGACTGGCCGCCATTAATTTTGAGGCACACGTACTACATGGCTGA", + "dna_sequence_length": 81, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3109", + "location": [ + [ + "NC_000913", + 3307933, + "-", + 81 + ] + ], + "md5": "9070402bb42e54e46262b5c879c712ac", + "parent_gene": "", + "protein_md5": "c8ec2c77c6bf99c1b43150229a9fe1ad", + "protein_translation": "MKIADQFHDELCRLAAINFEAHVLHG", + "protein_translation_length": 26, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010395" + ], + [ + "gene_synonym", + "ECK3151" + ], + [ + "gene_synonym", + "EcoGene:EG12371" + ], + [ + "gene_synonym", + "GI:16131055" + ], + [ + "gene_synonym", + "GeneID:947673" + ], + [ + "gene_synonym", + "JW3132" + ], + [ + "gene_synonym", + "NP_417632.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFB1" + ], + [ + "gene_synonym", + "b3163" + ], + [ + "gene_synonym", + "nlpI" + ], + [ + "gene_synonym", + "yhbM" + ] + ], + "dna_sequence": 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filamentation" + ], + "id": "CDS_3110", + "location": [ + [ + "NC_000913", + 3308924, + "-", + 885 + ] + ], + "md5": "dcec89d966e6b4ff7ff0050a4ebe7146", + "parent_gene": "", + "protein_md5": "2ce92cf2f06fc5a6d101faab7303c360", + "protein_translation": "MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQQ", + "protein_translation_length": 294, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010397" + ], + [ + "gene_synonym", + "ECK3152" + ], + [ + "gene_synonym", + "EcoGene:EG10743" + ], + [ + "gene_synonym", + "GI:145698316" + ], + [ + "gene_synonym", + "GeneID:947672" + ], + [ + "gene_synonym", + "JW5851" + ], + [ + "gene_synonym", + "NP_417633.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P05055" + ], + [ + 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"MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPDDSKED", + "protein_translation_length": 133, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010410" + ], + [ + "gene_synonym", + "ECK3157" + ], + [ + "gene_synonym", + "EcoGene:EG10505" + ], + [ + "gene_synonym", + "GI:16131060" + ], + [ + "gene_synonym", + "GeneID:947684" + ], + [ + "gene_synonym", + "JW3137" + ], + [ + "gene_synonym", + "NP_417637.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A705" + ], + [ + "gene_synonym", + "b3168" + ], + [ + "gene_synonym", + "gicD" + ], + [ + "gene_synonym", + "infB" + ], + [ + "gene_synonym", + "ssyG" + ] + ], + "dna_sequence": 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"MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQTLIDHLNQKNSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREAEESAKREAQQKAEREAAEQAKREAAEQAKREAAEKDKVSNQQDDMTKNAQAEKARREQEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTDNAEPTEDSSDYHVTTSQHARQAEDESDREVEGGRGRGRNAKAARPKKGNKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRTGDVIEVFEIIEIQRTIA", + "protein_translation_length": 890, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010413" + ], + [ + "gene_synonym", + "ECK3158" + ], + [ + "gene_synonym", + "EcoGene:EG10665" + ], + [ + "gene_synonym", + "GI:16131061" + ], + [ + "gene_synonym", + "GeneID:947682" + ], + [ + "gene_synonym", + "JW3138" + ], + [ + "gene_synonym", + "NP_417638.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFF6" + ], + [ + "gene_synonym", + "b3169" + ], + [ + "gene_synonym", + "nusA" + ] + ], + "dna_sequence": 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] + ], + "md5": "a9ecc1d4e5c3039bb43ce0935a9dfa90", + "parent_gene": "", + "protein_md5": "c9d64c9174aefb2a599ee9a9f81fde03", + "protein_translation": "MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFGSSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPAKPTSDIPN", + "protein_translation_length": 110, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010439" + ], + [ + "gene_synonym", + "ECK3165" + ], + [ + "gene_synonym", + "EcoGene:EG11553" + ], + [ + "gene_synonym", + "GI:16131066" + ], + [ + "gene_synonym", + "GeneID:947692" + ], + [ + "gene_synonym", + "JW3143" + ], + [ + "gene_synonym", + "NP_417643.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31120" + ], + [ + "gene_synonym", + "b3176" + ], + [ + "gene_synonym", + "glmM" + ], + [ + "gene_synonym", + "mrsA" + ], + [ + "gene_synonym", + "yhbF" + ] + ], + "dna_sequence": 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"GI:90111553" + ], + [ + "gene_synonym", + "GeneID:947691" + ], + [ + "gene_synonym", + "JW3144" + ], + [ + "gene_synonym", + "NP_417644.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AC13" + ], + [ + "gene_synonym", + "b3177" + ], + [ + "gene_synonym", + "dhpS" + ], + [ + "gene_synonym", + "folP" + ] + ], + "dna_sequence": 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3324911, + "-", + 849 + ] + ], + "md5": "e9a40b6318df99c73ea9b8b6a09e43aa", + "parent_gene": "", + "protein_md5": "3e5a1611818dc3e68ad57f45d999d7a6", + "protein_translation": "MKLFAQGTSLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAKENKRYE", + "protein_translation_length": 282, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010444" + ], + [ + "gene_synonym", + "ECK3167" + ], + [ + "gene_synonym", + "EcoGene:EG11506" + ], + [ + "gene_synonym", + "GI:16131068" + ], + [ + "gene_synonym", + "GeneID:947690" + ], + [ + "gene_synonym", + "JW3145" + ], + [ + "gene_synonym", + "NP_417645.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAI3" + ], + [ + "gene_synonym", + "b3178" + ], + [ + "gene_synonym", + "ftsH" + ], + [ + "gene_synonym", + 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"gene_synonym", + "NP_417665.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABZ4" + ], + [ + "gene_synonym", + "b3198" + ], + [ + "gene_synonym", + "kdsC" + ], + [ + "gene_synonym", + "yrbI" + ], + [ + "gene_synonym", + "yrbJ" + ] + ], + "dna_sequence": "ATGAGCAAAGCAGGTGCGTCGCTTGCGACCTGTTACGGCCCTGTCAGCGCCGACGTTATAGCAAAAGCAGAGAACATTCGTCTGCTGATCCTCGATGTCGATGGCGTACTGTCAGATGGCCTGATTTATATGGGCAATAATGGCGAAGAGCTGAAAGCGTTCAATGTTCGTGACGGTTATGGCATTCGTTGTGCGCTCACCTCTGATATTGAAGTCGCTATCATTACCGGGCGAAAGGCTAAACTGGTAGAAGATCGTTGTGCCACATTGGGGATCACTCACTTGTATCAGGGGCAGTCAAACAAACTGATCGCCTTTAGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGA", + "dna_sequence_length": 567, + "functions": [ + "3-deoxy-D-manno-octulosonate 8-phosphate phosphatase" + ], + "id": "CDS_3143", + "location": [ + [ + "NC_000913", + 3342273, + "+", + 567 + ] + ], + "md5": "b96c2c848591770e7834829262e4a25f", + "parent_gene": "", + "protein_md5": "f4baa5ce636807ed5876dbd3f737e4c6", + "protein_translation": "MSKAGASLATCYGPVSADVIAKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKLDEAKGQSI", + "protein_translation_length": 188, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010508" + ], + [ + "gene_synonym", + "ECK3188" + ], + [ + "gene_synonym", + "EcoGene:EG12806" + ], + [ + "gene_synonym", + "GI:16131089" + ], + [ + "gene_synonym", + "GeneID:947722" + ], + [ + "gene_synonym", + "JW3166" + ], + [ + "gene_synonym", + "NP_417666.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADV9" + ], + [ + "gene_synonym", + "b3199" + ], + [ + "gene_synonym", + "lptC" + ], + [ + "gene_synonym", + "yrbK" + ] + ], + "dna_sequence": "ATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTATCACTGGCGGTTCTGGTGATGATCGGCATTAATATGGCCGAAAAAGACGATACCGCCCAGGTGGTCGTCAACAACAATGATCCCACCTATAAAAGCGAGCATACGGACACGCTCGTCTATAACCCAGAAGGGGCACTAAGCTATCGATTGATTGCTCAACACGTTGAATATTATTCCGATCAGGCCGTTTCGTGGTTTACGCAGCCGGTACTTACCACGTTTGATAAGGATAAAATCCCGACATGGTCCGTAAAAGCAGATAAAGCCAAGCTGACCAATGACCGGATGCTCTATTTATATGGACACGTTGAAGTCAACGCACTTGTGCCAGACTCTCAACTTCGCAGAATCACGACGGATAACGCGCAGATCAATCTGGTGACGCAGGATGTTACCTCTGAAGACCTCGTCACGTTATACGGAACAACATTTAACTCCAGCGGTCTGAAAATGCGCGGCAACTTACGCAGCAAGAACGCCGAGCTGATTGAAAAGGTTAGAACATCCTATGAAATTCAAAACAAACAAACTCAGCCTTAA", + "dna_sequence_length": 576, + "functions": [ + "periplasmic membrane-anchored LPS-binding protein", + "LPS export protein" + ], + "id": "CDS_3144", + "location": [ + [ + "NC_000913", + 3342836, + "+", + 576 + ] + ], + "md5": "6e6513915def6d56b81a5dc4ce8f88ee", + "parent_gene": "", + "protein_md5": "e7b335ee1a6eca37cc7ce70d47aeab74", + "protein_translation": "MSKARRWVIIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKSEHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAKLTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRTSYEIQNKQTQP", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010510" + ], + [ + "gene_synonym", + "ECK3189" + ], + [ + "gene_synonym", + "EcoGene:EG12618" + ], + [ + "gene_synonym", + "GI:16131090" + ], + [ + "gene_synonym", + "GeneID:947920" + ], + [ + "gene_synonym", + "JW3167" + ], + [ + "gene_synonym", + "NP_417667.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADV1" + ], + [ + "gene_synonym", + "b3200" + ], + [ + "gene_synonym", + "lptA" + ], + [ + "gene_synonym", + "yhbN" + ] + ], + "dna_sequence": "ATGAAATTCAAAACAAACAAACTCAGCCTTAATCTTGTGCTTGCCAGCTCACTTCTGGCCGCCAGCATTCCGGCATTTGCCGTAACCGGAGACACTGATCAGCCGATCCACATTGAATCGGACCAGCAATCTCTTGATATGCAAGGCAACGTGGTTACCTTTACCGGTAATGTCATCGTCACCCAGGGCACCATCAAAATTAATGCCGACAAAGTGGTCGTTACCCGTCCGGGCGGCGAACAAGGTAAAGAAGTGATTGACGGCTACGGTAAACCGGCAACGTTCTACCAGATGCAGGACAACGGTAAACCCGTTGAAGGTCACGCTTCCCAGATGCACTACGAACTGGCAAAAGATTTTGTCGTTCTGACGGGTAATGCTTATCTGCAGCAGGTCGATAGCAACATTAAGGGCGATAAGATCACTTACCTGGTGAAAGAGCAGAAAATGCAGGCTTTCAGCGACAAAGGCAAGCGCGTAACAACCGTTCTGGTGCCGTCGCAGCTGCAGGACAAAAACAACAAAGGCCAGACCCCGGCACAGAAGAAGGGTAATTAA", + "dna_sequence_length": 558, + "functions": [ + "lipopolysaccharide export ABC transporter periplasmic binding protein", + "Lipid A binding protein", + "LPS export and assembly protein" + ], + "id": "CDS_3145", + "location": [ + [ + "NC_000913", + 3343380, + "+", + 558 + ] + ], + "md5": "6dc11a40bb909355adaf02d8dc6e57bf", + "parent_gene": "", + "protein_md5": "9e16eff5a04c7b0ce378fdc814bd2127", + "protein_translation": "MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQSLDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNGKPVEGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRVTTVLVPSQLQDKNNKGQTPAQKKGN", + "protein_translation_length": 185, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010512" + ], + [ + "gene_synonym", + "ECK3190" + ], + [ + "gene_synonym", + "EcoGene:EG11680" + ], + [ + "gene_synonym", + "GI:16131091" + ], + [ + "gene_synonym", + "GeneID:947725" + ], + [ + "gene_synonym", + "JW3168" + ], + [ + "gene_synonym", + "NP_417668.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9V1" + ], + [ + "gene_synonym", + "b3201" + ], + [ + "gene_synonym", + "lptB" + ], + [ + "gene_synonym", + "yhbG" + ] + ], + "dna_sequence": "ATGGCAACATTAACTGCAAAGAACCTTGCAAAAGCCTATAAAGGCCGTCGCGTGGTAGAAGACGTCAGCCTGACCGTCAACTCCGGGGAAATTGTCGGTCTGCTGGGGCCAAACGGTGCCGGTAAGACCACCACTTTCTACATGGTTGTAGGCATTGTGCCGCGCGATGCGGGCAACATCATTATTGATGATGACGATATCAGTCTGCTGCCTCTGCATGCACGCGCGCGCCGCGGTATCGGCTATCTGCCACAGGAAGCCTCCATTTTCCGTCGCCTCAGCGTTTACGATAACCTGATGGCGGTACTGCAAATTCGTGACGACTTGTCTGCTGAACAACGTGAAGACCGCGCGAACGAGCTGATGGAAGAGTTTCACATTGAGCACCTGCGTGACAGCATGGGGCAGTCACTCTCCGGGGGTGAACGTCGCCGTGTAGAAATTGCCCGCGCACTGGCTGCGAATCCGAAATTTATTCTGCTCGACGAACCGTTTGCCGGGGTTGACCCGATCTCGGTTATCGACATTAAACGCATCATTGAGCACCTGCGCGACAGCGGCCTGGGCGTGCTGATCACTGACCACAACGTGCGTGAAACACTGGCGGTTTGTGAACGCGCTTATATCGTCAGTCAGGGGCATTTGATCGCCCACGGCACGCCTACAGAAATCTTACAAGACGAACACGTTAAGCGTGTATACCTTGGGGAAGACTTCAGACTCTGA", + "dna_sequence_length": 726, + "functions": [ + "lipopolysaccharide export ABC transporter ATPase" + ], + "id": "CDS_3146", + "location": [ + [ + "NC_000913", + 3343944, + "+", + 726 + ] + ], + "md5": "fc9e8123db886ef89678d4c4bd24e216", + "parent_gene": "", + 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"MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTMVLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDLSLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSFLDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEKVFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDALERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNIFNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITDGTRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSVAEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFKPGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDDVLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSKSEALLDIPMLEQYLELVGPKLITDGLAVFEKMMPGYVSVLESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQSPDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK", + "protein_translation_length": 778, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010540" + ], + [ + "gene_synonym", + "ECK3201" + ], + [ + "gene_synonym", + "EcoGene:EG12809" + ], + [ + "gene_synonym", + "GI:16131101" + ], + [ + "gene_synonym", + "GeneID:947733" + ], + [ + "gene_synonym", + "JW3178" + ], + [ + "gene_synonym", + "NP_417678.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADW6" + ], + [ + "gene_synonym", + "b3211" + ], + [ + "gene_synonym", + "yhcC" + ] + ], + "dna_sequence": 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oxidoreductase, Radical SAM superfamily protein" + ], + "id": "CDS_3156", + "location": [ + [ + "NC_000913", + 3354050, + "-", + 930 + ] + ], + "md5": "e287e19d6d711d3f93f4bdadd400f14b", + "parent_gene": "", + "protein_md5": "386e027e457f0b95276ef25a571eff4e", + "protein_translation": "MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQQAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRGHDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHIVKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWCENRWTGMVELDRYLNEHGVQGSALGRPWLPPTE", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010545" + ], + [ + "gene_synonym", + "ECK3202" + ], + [ + "gene_synonym", + "EcoGene:EG10403" + ], + [ + "gene_synonym", + "GI:308209621" + ], + [ + "gene_synonym", + "GeneID:947724" + ], + [ + "gene_synonym", + "JW3179" + ], + [ + "gene_synonym", + "NP_417679.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09831" + ], + [ + "gene_synonym", + "aspB" + ], + [ + "gene_synonym", + "b3212" + ], + [ + "gene_synonym", + "gltB" + ], + [ + "gene_synonym", + "ossB" + ], + [ + "gene_synonym", + "psiQ" + ] + ], + "dna_sequence": 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+ "dna_sequence_length": 4461, + "functions": [ + "glutamate synthase, large subunit" + ], + "id": "CDS_3157", + "location": [ + [ + "NC_000913", + 3354725, + "+", + 4461 + ] + ], + "md5": "48bd98579663fa1bf1c3d08907bb8c13", + "parent_gene": "", + "protein_md5": "8d3ca885fcf8569e84aca6864ab563a1", + "protein_translation": "MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGAILADGKTGDGCGLLLQKPDRFFRIVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIVEEELQRETLSIVGWRDVPTNEGVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIARRRIEKRLEADKDFYVCSLSNLVNIYKGLCMPTDLPRFYLDLADLRLESAICLFHQRFSTNTVPRWPLAQPFRYLAHNGEINTITGNRQWARARTYKFQTPLIPDLHDAAPFVNETGSDSSSMDNMLELLLAGGMDIIRAMRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWDGPAGIVMSDGRFAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVGPGELMVIDTRSGRILHSAETDDDLKSRHPYKEWMEKNVRRLVPFEDLPDEEVGSRELDDDTLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQQFAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLTTMKEEHYRADTLDITFDVTKTTLEATVKELCDKAEKMVRSGTVLLVLSDRNIAKDRLPVPAPMAVGAIQTRLVDQSLRCDANIIVETASARDPHHFAVLLGFGATAIYPYLAYETLGRLVDTHAIAKDYRTVMLNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDVVGLCFQGAVSRIGGASFEDFQQDLLNLSKRAWLARKPISQGGLLKYVHGGEYHAYNPDVVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGENAVNIADVEPASELFKRFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGRFGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHHDIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGTGASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARETRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHPGKALYCTENNPPFDNGLLNAQLLQQAKPFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLAADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSHEASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCILGKTGVNFGAGMTGGFAYVLDESGDFRKRVNPELVEVLSVDALAIHEEHLRGLITEHVQHTGSQRGEEILANWSTFATKFALVKPKSSDVKALLGHRSRSAAELRVQAQ", + "protein_translation_length": 1486, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010547" + ], + [ + "gene_synonym", + "ECK3203" + ], + [ + "gene_synonym", + "EcoGene:EG10404" + ], + [ + "gene_synonym", + "GI:16131103" + ], + [ + "gene_synonym", + "GeneID:947723" + ], + [ + "gene_synonym", + "JW3180" + ], + [ + "gene_synonym", + "NP_417680.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09832" + ], + [ + "gene_synonym", + "aspB" + ], + [ + "gene_synonym", + "b3213" + ], + [ + "gene_synonym", + "gltD" + ], + [ + "gene_synonym", + "ossB" + ], + [ + "gene_synonym", + "psiQ" + ] + ], + "dna_sequence": "ATGAGTCAGAATGTTTATCAATTTATCGACCTGCAGCGCGTTGATCCGCCAAAGAAACCGCTGAAGATCCGCAAAATTGAGTTTGTTGAAATTTACGAGCCGTTTTCCGAAGGCCAGGCCAAAGCGCAGGCTGACCGCTGCCTGTCGTGCGGCAACCCATACTGCGAGTGGAAATGCCCGGTACACAACTACATCCCGAACTGGCTGAAGCTCGCCAACGAGGGGCGTATTTTTGAAGCGGCGGAACTGTCGCACCAGACCAACACCCTGCCGGAAGTTTGCGGACGAGTCTGCCCGCAAGACCGTCTGTGCGAAGGTTCCTGCACTCTGAACGATGAGTTTGGCGCGGTGACCATCGGCAACATTGAGCGCTATATCAACGATAAAGCGTTCGAGATGGGCTGGCGTCCGGATATGTCTGGTGTGAAACAGACCGGTAAAAAAGTGGCGATTATCGGCGCAGGCCCGGCAGGTCTGGCGTGTGCGGATGTCCTGACGCGTAACGGCGTAAAAGCCGTTGTCTTCGACCGTCATCCAGAAATTGGCGGGCTGCTGACCTTCGGTATTCCGGCCTTCAAGCTGGAAAAAGAGGTAATGACGCGTCGCCGTGAAATCTTCACCGGCATGGGTATTGAATTCAAACTCAATACCGAAGTGGGCCGCGACGTACAGCTGGACGATCTGCTGAGTGATTACGATGCCGTGTTCCTTGGCGTCGGGACTTATCAGTCAATGCGCGGCGGGCTGGAAAACGAAGACGCCGATGGCGTGTACGCAGCGCTGCCGTTCCTCATCGCCAACACCAAACAGTTAATGGGCTTTGGTGAAACCCGCGACGAACCGTTCGTCAGCATGGAAGGCAAACGCGTGGTGGTCCTTGGCGGTGGCGACACTGCGATGGACTGCGTGCGTACGTCCGTGCGCCAGGGAGCGAAGCACGTTACCTGTGCCTATCGTCGTGATGAAGAGAACATGCCGGGTTCCCGCCGCGAAGTGAAAAACGCGCGGGAAGAAGGCGTAGAGTTCAAATTCAACGTCCAGCCGCTGGGTATTGAAGTGAACGGTAACGGCAAAGTCAGCGGCGTAAAAATGGTGCGTACCGAAATGGGCGAACCGGACGCCAAAGGCCGTCGCCGCGCGGAGATCGTTGCAGGTTCCGAACATATCGTTCCGGCAGATGCGGTGATCATGGCGTTTGGTTTCCGTCCACACAACATGGAATGGCTGGCAAAACACAGCGTCGAGCTGGATTCACAAGGCCGCATCATCGCCCCGGAAGGCAGCGACAACGCCTTCCAGACCAGCAACCCGAAAATCTTTGCTGGCGGCGATATCGTCCGTGGTTCCGATCTGGTGGTGACCGCTATTGCCGAAGGTCGTAAGGCGGCAGACGGTATTATGAACTGGCTGGAAGTTTAA", 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"protein_translation": "MLRHITFTVFITTSMNTLATGMVPETSVLLVDEKRGEASINIKNTDDHPSLLYTTIVDLPESNKSIRLIPTQPVIRVEAGQVQQVRFLLQATVPLQSEELKRVTFEGIPPKDDKSSRVTVSIRQDLPVLIHPASLPEERETWKFLEWRKNGDQIEISNPSNYVVRMTLQFKTLPSGKTGAINKTYFLPHTSTTTALTNATDTKVEFYPASRYGYRGNKYVTDLK", + "protein_translation_length": 224, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010554" + ], + [ + "gene_synonym", + "ECK3206" + ], + [ + "gene_synonym", + "EcoGene:EG12810" + ], + [ + "gene_synonym", + "GI:16131106" + ], + [ + "gene_synonym", + "GeneID:947738" + ], + [ + "gene_synonym", + "JW3183" + ], + [ + "gene_synonym", + "NP_417683.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45420" + ], + [ + "gene_synonym", + "b3216" + ], + [ + "gene_synonym", + "yhcD" + ] + ], + "dna_sequence": "ATGTTAAAAAAAACGTTACTGGCCTACACCATTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCCTTCTGAAGAAAAAAATGGCTGTTACGACTATATATTGTCCTACCCGGGTACCACAATCACACCATTACCTAACCAGGAAGCGTTAGATATTATCGTTTCACCACAGGCGATCATTCCCATAGGGTTGGATCTCACAAACGCAGCAACTGGTGGAACAGCTGCGCTGCTAAACTACTCTCTGATGAGCAGCCGTGCAGAATTTTCTAATGGGAGTTCGGACTACTCCCAGGCTGCACTTGAAGGCGGGATTAATATTAATGACTGGATGTTACGCAGCCATCAGTTCCTTACACAAACAAATGGCACATTCAGTAACCAGAACTCGTCAACCTACCTTCAACGTACCTTTACAGATCTTAAAACACTCATGCGAGCAGGTGAAGTTAACCTCAATAATAGCGTGTTGGAAGGAGCCAGTATTTACGGTATCGAAATCGCACCGGACAACGCATTGCAAACCAGCGGCAGTGGTGTGCAAGTTACTGGTATAGCCAACACCTCTCAGGCTCGTGTCGAGATTCGTCAACAAGGAGTTTTAATTCATTCCATTCTGGTTCCTGCGGGCGCATTCACTATCCCTGATGTACCTGTTCGCAATGGTAATAGTGATCTTAATGTCACCGTTGTCGAAACAGACGGTAGTTCGCACAACTATATTGTTCCCTCCACCCTGTTTAATCAGCATGTAGAAAGCTTCCAGGGTTATCGCTTCGCGATAGGGCGGGTAGACGATGACTATGACGAATCACCTTGGGTAATTAGTGCATCGAGCGGATGGAATCTGACACGCTGGAGTGCAATGAACGGCGGCGTTATCGTAGCAGAAAATTATCAGGCGGCATCAATCCGGTCGAGTCTGGTTCCCCTGCCCGATTTAACAGTGAGCAGCCAAATTAGTACATCGCAGGATACGAAAGACTCACTGCAAGGACAGAAATATCGTCTTGACGCGAACTACAATCTCCCATTTTCACTTGGGCTAACAACCAGCCTCACTCGATCTGATCGCCATTATCGCGAACTGTCTGAAGCGATTGATGATGATTATACCGATCCGACTAAAAGCACTTATGCGCTTGGTTTAAACTGGTCTAACTCCATTCTGGGTGGTTTCAACATCAGTGGCTATAAAACATATAGTTACGACGGTGACAATGACTCAAGCAACCTTAATATTAACTGGAACAAAGCGTTCAAACACGCCACGGTTTCCGTCAACTGGCAGCATCAACTTAGTGCTTCAGAAAATAATGAAGACGATGGTGATCTGTTCTACGTCAACATCAGTATTCCATTTGGCAGATCAAACACCGCCACACTGTATACTCGCCATGACGATCATAAAACCCACTATGGTACTGGTGTCATGGGAGTCGTCTCAGATGAGATGTCCTACTATGTGAATGCTGAACGAGATCACGACGAACGTGAAACGAGCTTGAACGGCAGTATCAGTTCCAATCTCCATTACACCCAAGTCAGCCTTGCCGCAGGAGCAAGCGGCAGTGATAGCCGTACTTACAACGGTACGATGTCAGGTGGTATTGCCGTACATGATCAGGGAGTGACCTTTTCACCGTGGACTATCAATGACACTTTCGCCATCGCAAAAATGGATAACAATATTGCAGGTGTCAGAATTACATCTCAGGCAGGCCCAGTATGGACAGATTTTCGGGGTAATGCCGTCATTCCATCAATCCAGCCGTGGCGAACATCAGGAGTTGAGATCGATACCGCCAGCTTGCCAAAAAATGTCGATATCGGTAACGGCACAAAAATGATCAAACAAGGCCGTGGTGCAGTAGGGAAAGTCGGATTCAGTGCGATAACACAACGCCGTGCATTACTCAATATCACACTTTCCGACGGCAAAAAACTGCCCAGAGGCGTTGCGATTGAAGATAGTGAAGGCAACTATCTGACAACATCAGTGGATGACGGTGTTGTATTCCTCAATAACATCAAACCGGACATGGTGCTAGATATAAAAGATGAGCAGCAATCATGCCGTATTCACCTTACATTCCCAGAAGATGCACCAAAAGATGTGTTCTATGAGACAGCAACAGGAGAGTGCCAATGA", 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"MLKKTLLAYTIGFAFSPPANADGIEIAAVDFDRETLKSLGVDPNISHYFSRSARFLPGEYSLIVSVNGEKKGNIATRFDENGDICLDQAFLQQAGLKIPSEEKNGCYDYILSYPGTTITPLPNQEALDIIVSPQAIIPIGLDLTNAATGGTAALLNYSLMSSRAEFSNGSSDYSQAALEGGININDWMLRSHQFLTQTNGTFSNQNSSTYLQRTFTDLKTLMRAGEVNLNNSVLEGASIYGIEIAPDNALQTSGSGVQVTGIANTSQARVEIRQQGVLIHSILVPAGAFTIPDVPVRNGNSDLNVTVVETDGSSHNYIVPSTLFNQHVESFQGYRFAIGRVDDDYDESPWVISASSGWNLTRWSAMNGGVIVAENYQAASIRSSLVPLPDLTVSSQISTSQDTKDSLQGQKYRLDANYNLPFSLGLTTSLTRSDRHYRELSEAIDDDYTDPTKSTYALGLNWSNSILGGFNISGYKTYSYDGDNDSSNLNINWNKAFKHATVSVNWQHQLSASENNEDDGDLFYVNISIPFGRSNTATLYTRHDDHKTHYGTGVMGVVSDEMSYYVNAERDHDERETSLNGSISSNLHYTQVSLAAGASGSDSRTYNGTMSGGIAVHDQGVTFSPWTINDTFAIAKMDNNIAGVRITSQAGPVWTDFRGNAVIPSIQPWRTSGVEIDTASLPKNVDIGNGTKMIKQGRGAVGKVGFSAITQRRALLNITLSDGKKLPRGVAIEDSEGNYLTTSVDDGVVFLNNIKPDMVLDIKDEQQSCRIHLTFPEDAPKDVFYETATGECQ", + "protein_translation_length": 793, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010556" + ], + [ + "gene_synonym", + "ASAP:ABE-0285070" + ], + [ + "gene_synonym", + "ASAP:ABE-0285102" + ], + [ + "gene_synonym", + "ECK3207" + ], + [ + "gene_synonym", + "EcoGene:EG12811" + ], + [ + "gene_synonym", + "GeneID:4056032" + ], + [ + "gene_synonym", + "JW3184" + ], + [ + "gene_synonym", + "JW3187" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45421" + ], + [ + "gene_synonym", + "b4569" + ], + [ + "gene_synonym", + "yhcE" + ] + ], + "dna_sequence": "ATGAAACGGATAATAACAGGATGCCTGCTGCTGAACTTCGCCATGGCCGCTCAGGCAGAGTGTAATATCTCCAGTAGCATACAAAATATCGACTATGGCAAACGAAGTGCTGCCATGCGCCAAGTTGACCGGGGTAAAACAACACAATTAGCAGACAGAACAATCACGCTGGTAATGCAATGCGATCAGGACGCTCATATTCGTGTTCAGTTGAATACCGCTAATATTTCCAACAACGGATTTGGATTTGGCCCGAATGGTTCATTAAATCTGATCGCCAGCGATGCATTTTCAGGTAGTAACAATCTCGACCTGGCGTTAGCCAGTGGCAAAAATGACAATCCGGGCAGCACAGGAACAGCATCAATTAGTACTTCCCCCAATAATTGGCTGGTGTTTATGCAAAATGGTCAAGAAGTGGTAATTGATAGCGGTAAAAGCGTTAGCCTCACACTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAATGA", + "dna_sequence_length": 546, + "id": "CDS_3162", + "location": 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"gene_synonym", + "GeneID:947750" + ], + [ + "gene_synonym", + "JW3190" + ], + [ + "gene_synonym", + "NP_417688.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45424" + ], + [ + "gene_synonym", + "b3221" + ], + [ + "gene_synonym", + "yhcH" + ] + ], + "dna_sequence": "ATGATGATGGGTGAAGTACAGTCATTACCGTCTGCTGGGTTACATCCTGCGTTACAGGACGCGTTAACGCTGGCATTAGCTGCCAGACCGCAAGAAAAAGCGCCGGGTCGTTACGAATTACAGGGCGACAATATCTTTATGAATGTCATGACGTTTAACACTCAATCGCCCGTCGAGAAAAAAGCGGAATTGCACGAGCAATACATTGATATCCAGCTGTTATTAAACGGTGAGGAACGGATTCTGTTTGGCATGGCAGGCACTGCGCGTCAGTGTGAAGAGTTCCACCATGAGGATGATTATCAGCTTTGCAGCACCATTGATAACGAGCAAGCCATCATCTTAAAACCGGGAATGTTCGCCGTGTTTATGCCAGGTGAACCGCATAAACCAGGATGCGTTGTCGGCGAGCCTGGAGAGATTAAAAAGGTTGTGGTGAAGGTTAAGGCTGATTTAATGGCTTAA", + "dna_sequence_length": 465, + "functions": [ + "DUF386 family protein, cupin superfamily" + ], + "id": "CDS_3166", + "location": [ + [ + "NC_000913", + 3369478, + "-", + 465 + ] + ], + "md5": "4ae1c041e48b15fbca90b37636728d10", + "parent_gene": "", + 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[ + "NC_000913", + 3370350, + "-", + 876 + ] + ], + "md5": "2b3fda4755b24ae0def24e4635fa6fb7", + "parent_gene": "", + "protein_md5": "e53821ca4ede87a7a00588cae24a337d", + "protein_translation": "MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIASGRGIAAAAQGELAGADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQGEKL", + "protein_translation_length": 291, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010575" + ], + [ + "gene_synonym", + "ECK3212" + ], + [ + "gene_synonym", + "EcoGene:EG12816" + ], + [ + "gene_synonym", + "GI:16131113" + ], + [ + "gene_synonym", + "GeneID:947745" + ], + [ + "gene_synonym", + "JW3192" + ], + [ + "gene_synonym", + "NP_417690.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A761" + ], + [ + "gene_synonym", + "b3223" + ], + [ + "gene_synonym", + "nanE" + ], 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+ ], + [ + "gene_synonym", + "GI:49176330" + ], + [ + "gene_synonym", + "GeneID:2847740" + ], + [ + "gene_synonym", + "JW5542" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46474" + ], + [ + "gene_synonym", + "YP_026208.1" + ], + [ + "gene_synonym", + "b4472" + ], + [ + "gene_synonym", + "yhdP" + ], + [ + "gene_synonym", + "yhdQ" + ], + [ + "gene_synonym", + "yhdR" + ] + ], + "dna_sequence": "GTGAGGCGATTGCCGGGGATTTTACTGCTTACTGGAGCCGCGCTCGTTGTGATCGCTGCCCTGCTGGTTAGCGGCCTGCGTATTGCTTTACCGCATCTTGACGCCTGGCGTCCGGAAATCCTCAACAAAATAGAATCCGCGACTGGCATGCCGGTAGAAGCCAGTCAGCTCTCAGCCAGCTGGCAGAATTTTGGCCCGACGCTTGAAGCACACGACATCCGTGCAGAACTAAAAGATGGCGGCGAATTTTCGGTTAAACGCGTTACTCTGGCGCTGGATGTCTGGCAGAGCCTGTTACATATGCGCTGGCAGTTTCGCGACCTCACTTTCTGGCAGCTGCGCTTTCGCACCAACACTCCTATCACCAGCGGTGGTAGTGATGACAGTCTGGAAGCCAGTCACATCAGCGATCTGTTTCTTCGTCAATTTGACCATTTCGATCTTCGCGACAGTGAAGTCAGTTTCCTGACGCCATCCGGTCAGCGCGCCGAGCTGGCGATCCCACAACTCACCTGGCTGAACGATCCACGTCGACACCGTGCGGAAGGCCTGGTAAGCCTCTCCAGCCTTACCGGACAGCACGGCGTGATGCAGGTGCGCATGGATTTGCGCGATGATGAGGGGTTGTTAAGCAATGGTCGCGTCTGGCTCCAGGCGGATGACATCGACCTGAAGCCGTGGCTCGGTAAATGGATGCAGGACAATATTGCGCTGGAAACGGCACAGTTCTCCCTTGAAGGCTGGATGACGATCGACAAAGGCGATGTAACCGGCGGTGACGTCTGGCTGAAACAGGGCGGTGCCAGCTGGTTGGGCGAGAAGCAAACGCATACGCTGTCGGTGGATAATCTGACCGCGCATATTACGCGTGAAAATCCGGGCTGGCAGTTCTCTATTCCCGATACACGGATCACGATGGACGGCAAACCCTGGCCGAGCGGAGCATTGACGCTGGCCTGGATACCGGAACAGGACGTTGGCGGCAAAGACAATAAACGCAGTGACGAACTCCGGATTCGCGCCAGTAATCTGGAGCTGGCAGGCCTGGAGGGCATACGCCCGCTGGCCGCGAAACTTTCACCTGCACTGGGTGATGTTTGGCGCTCCACACAACCGAGCGGCAAGATTAACACTCTGGCGCTGGATATCCCGCTTCAGGCGGCAGACAAGACCCGTTTTCAGGCATCGTGGAGCGATCTGGCCTGGAAGCAATGGAAATTATTACCGGGTGCGGAACACTTCTCCGGGACGCTTTCCGGCAGCGTTGAAAATGGTTTGCTTACCGCGTCGATGAAGCAGGCAAAGATGCCTTACGAAACGGTATTCCGTGCGCCACTAGAAATCGCCGACGGCCAGGCAACTATAAGCTGGCTGAACAATAACAAAGGTTTCCAGCTGGATGGGCGTAATATTGACGTTAAAGCCAAAGCCGTCCATGCGCGCGGCGGTTTTCGTTACCTGCAACCTGCTAACGATGAACCCTGGCTGGGTATTCTGGCTGGCATCAGTACCGATGATGGTTCACAAGCCTGGCGCTATTTCCCGGAAAACTTGATGGGTAAAGACCTGGTTGATTACTTAAGTGGCGCGATTCAGGGCGGTGAAGCGGATAACGCGACGCTGGTTTATGGTGGCAATCCGCAACTCTTCCCCTATAAACACAACGAAGGTCAGTTTGAAGTGCTGGTGCCGCTGCGCAACGCGAAGTTTGCCTTCCAGCCGGACTGGCCTGCATTAACTAACCTTGATATTGAACTGGACTTTATTAACGACGGTTTATGGATGAAAACCGATGGCGTTAATCTGGGCGGCGTGCGCGCGAGTAATCTTACCGCAGTGATCCCTGACTACTCAAAAGAAAAACTGCTGATTGACGCTGACATTAAAGGTCCGGGTAAAGCCGTTGGCCCTTACTTTGATGAGACACCGCTGAAAGATTCTCTGGGTGCGACCCTGCAAGAACTCCAGCTCGACGGCGATGTGAATGCTCGCTTACATCTTGATATCCCGCTGAACGGCGAACTGGTAACCGCGAAAGGTGAAGTGACGCTGCGTAATAACAGTCTGTTTATCAAACCACTCGACAGCACCCTGAAAAATTTGAGCGGTAAATTCAGCTTTATCAATAGCGATCTGCAAAGTGAACCACTGACAGCAAGCTGGTTTAATCAGCCGTTGAACGTGGATTTTTCCACCAAAGAAGGGGCAAAAGCCTACCAGGTAGCGGTAAACCTCAACGGTAACTGGCAACCGGCGAAAACCGGCGTTCTGCCTGAAGCGGTGAACGAAGCATTGAGTGGCAGCGTGGCGTGGGATGGTAAAGTGGGCATTGATCTGCCTTATCATGCTGGTGCGACCTATAACATAGAGCTGAACGGCGATCTAAAGAATGTGAGCAGTCACTTACCTTCACCGTTAGCCAAACCTGCGGGTGAACCACTAGCGGTAAACGTTAAGGTTGATGGCAATCTCAACAGCTTTGAATTAACCGGACAGGCTGGTGCGGATAATCATTTCAATAGCCGCTGGTTGCTCGGTCAAAAGCTGACGCTCGATCGTGCTATTTGGGCGGCAGACAGTAAAACGCTCCCGCCGTTGCCGGAACAAAGTGGCGTTGAACTCAATATGCCGCCGATGAATGGTGCCGAGTGGCTGGCCCTGTTCCAGAAAGGCGCTGCGGAGAGTGTCGGTGGTGCAGCGAGTTTCCCACAACACATAACGTTACGTACGCCTATGTTGTCACTGGGAAATCAGCAATGGAATAACCTGAGTATTGTTTCGCAACCGACGGCAAATGGCACCCTGGTTGAAGCGCAAGGGCGTGAAATCAACGCCACGCTAGCGATGCGTAATAACGCGCCGTGGCTGGCGAATATCAAATATCTTTATTACAACCCGAGCGTGGCGAAAACTCGTGGTGATTCAACGCCGTCATCACCTTTCCCGACAACGGAGCGCATTAACTTCCGTGGCTGGCCGGACGCCCAAATACGATGCACAGAGTGCTGGTTCTGGGGGCAAAAATTCGGTCGCATTGACAGTGATATCACCATTTCTGGCGATACGTTAACGCTGACCAATGGACTGATTGATACTGGTTTCTCGCGGCTTACTGCCGATGGTGAATGGGTTAATAATCCGGGGAATGAACGTACCTCGCTGAAAGGAAAACTGCGCGGGCAGAAAATTGATGCCGCCGCAGAATTTTTTGGTGTCACGACGCCCATACGCCAGTCGTCATTTAATGTGGATTACGATTTACACTGGCGCAAAGCACCCTGGCAGCCAGATGAAGCGACGTTGAATGGCATCATTCATACTCAACTGGGTAAAGGCGAAATTACCGAAATCAATACCGGACATGCCGGGCAATTGCTGCGCTTATTGAGCGTAGATGCCCTGATGCGTAAGCTGCGTTTTGATTTCAGAGACACTTTTGGCGAAGGGTTCTATTTTGACTCCATTCGCAGCACCGCGTGGATTAAAGACGGCGTTATGCACACCGACGACACGCTGGTGGATGGCCTGGAGGCGGATATCGCCATGAAAGGGTCGGTAAATCTGGTACGTCGCGACCTGAATATGGAAGCGGTTGTCGCACCAGAGATTTCTGCGACGGTGGGCGTGGCTGCGGCTTTTGCGGTTAACCCCATTGTTGGCGCGGCAGTGTTTGCCGCCAGTAAAGTGCTGGGGCCGCTGTGGAGCAAAGTCTCCATTTTGCGCTATCACATTTCGGGTCCGCTGGACGATCCGCAAATCAACGAAGTGTTGCGCCAACCGCGTAAAGAAAAAGCGCAATGA", 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"MRRLPGILLLTGAALVVIAALLVSGLRIALPHLDAWRPEILNKIESATGMPVEASQLSASWQNFGPTLEAHDIRAELKDGGEFSVKRVTLALDVWQSLLHMRWQFRDLTFWQLRFRTNTPITSGGSDDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSGQRAELAIPQLTWLNDPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQADDIDLKPWLGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQTHTLSVDNLTAHITRENPGWQFSIPDTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRSDELRIRASNLELAGLEGIRPLAAKLSPALGDVWRSTQPSGKINTLALDIPLQAADKTRFQASWSDLAWKQWKLLPGAEHFSGTLSGSVENGLLTASMKQAKMPYETVFRAPLEIADGQATISWLNNNKGFQLDGRNIDVKAKAVHARGGFRYLQPANDEPWLGILAGISTDDGSQAWRYFPENLMGKDLVDYLSGAIQGGEADNATLVYGGNPQLFPYKHNEGQFEVLVPLRNAKFAFQPDWPALTNLDIELDFINDGLWMKTDGVNLGGVRASNLTAVIPDYSKEKLLIDADIKGPGKAVGPYFDETPLKDSLGATLQELQLDGDVNARLHLDIPLNGELVTAKGEVTLRNNSLFIKPLDSTLKNLSGKFSFINSDLQSEPLTASWFNQPLNVDFSTKEGAKAYQVAVNLNGNWQPAKTGVLPEAVNEALSGSVAWDGKVGIDLPYHAGATYNIELNGDLKNVSSHLPSPLAKPAGEPLAVNVKVDGNLNSFELTGQAGADNHFNSRWLLGQKLTLDRAIWAADSKTLPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAASFPQHITLRTPMLSLGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIKYLYYNPSVAKTRGDSTPSSPFPTTERINFRGWPDAQIRCTECWFWGQKFGRIDSDITISGDTLTLTNGLIDTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQSSFNVDYDLHWRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRFDFRDTFGEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVAPEISATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQPRKEKAQ", 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"EcoGene:EG11298" + ], + [ + "gene_synonym", + "GI:16131136" + ], + [ + "gene_synonym", + "GeneID:947753" + ], + [ + "gene_synonym", + "JW3217" + ], + [ + "gene_synonym", + "NP_417714.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25536" + ], + [ + "gene_synonym", + "b3248" + ], + [ + "gene_synonym", + "maf" + ], + [ + "gene_synonym", + "yhdE" + ] + ], + "dna_sequence": "ATGACTTCTCTGTATTTAGCTTCCGGTTCTCCGCGTCGTCAGGAGTTACTTGCGCAACTTGGCGTGACCTTTGAACGTATTGTTACGGGCATTGAGGAGCAGCGTCAGCCGCAGGAGAGCGCGCAGCAGTATGTTGTGCGTCTGGCGCGCGAGAAAGCACGGGCAGGTGTCGCGCAAACGGCGAAGGATCTCCCGGTGCTGGGTGCGGATACTATCGTTATCCTGAACGGAGAAGTGCTGGAGAAACCGCGCGACGCAGAGCATGCGGCGCAGATGTTGCGCAAATTATCGGGTCAGACCCATCAGGTGATGACAGCAGTGGCGTTGGCCGACAGCCAGCACATTCTCGATTGCCTGGTGGTCACCGATGTGACTTTCAGAACGTTAACAGACGAAGACATCGCGGGCTATGTCGCCAGCGATGAACCGTTAGATAAAGCAGGTGCATACGGTATTCAGGGGCTGGGTGGCTGTTTTGTCAGGAAGATAAATGGCAGCTATCACGCCGTAGTCGGCTTACCGCTGGTTGAAACGTATGAATTATTAAGTAATTTTAACGCACTGCGTGAGAAAAGGGATAAACATGACGGCTGA", + "dna_sequence_length": 594, + "functions": [ + "dTTP/UTP pyrophosphatase", + "m(5)UTP/m(5)CTP/pseudo-UTP pyrophosphatase" + ], + "id": "CDS_3192", + "location": [ + [ + "NC_000913", + 3398378, + "-", + 594 + ] + ], + "md5": "9dbcf58615b6aaf64cd154f04a10254a", + "parent_gene": "", + "protein_md5": "388c1f1c8f32ff750b138a39fd86c3d7", + "protein_translation": "MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQYVVRLAREKARAGVAQTAKDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQVMTAVALADSQHILDCLVVTDVTFRTLTDEDIAGYVASDEPLDKAGAYGIQGLGGCFVRKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG", + "protein_translation_length": 197, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010656" + ], + [ + "gene_synonym", + "ECK3237" + ], + [ + "gene_synonym", + "EcoGene:EG10610" + ], + [ + "gene_synonym", + "GI:16131137" + ], + [ + "gene_synonym", + "GeneID:947756" + ], + [ + "gene_synonym", + "JW3218" + ], + [ + "gene_synonym", + "NP_417715.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABH4" + ], + [ + "gene_synonym", + "b3249" + ], + [ + "gene_synonym", + "mreD" + ] + ], + "dna_sequence": "GTGGCGAGCTATCGTAGCCAGGGACGCTGGGTAATCTGGCTCTCTTTCCTCATTGCGCTGTTGCTGCAAATCATGCCCTGGCCGGATAACCTGATTGTTTTCCGGCCAAACTGGGTGTTACTCATCTTGTTGTATTGGATCCTGGCCTTGCCTCATCGCGTAAATGTGGGCACAGGTTTTGTGATGGGTGCCATACTGGATCTGATCAGCGGCTCGACGCTTGGCGTACGCGTATTGGCGATGAGCATCATTGCTTACCTGGTGGCGCTGAAATACCAGCTTTTCCGCAACCTCGCATTATGGCAGCAGGCGCTGGTCGTCATGTTGCTTTCGCTGGTGGTGGATATTATTGTTTTCTGGGCAGAGTTTTTAGTGATTAACGTCTCTTTCAGACCGGAAGTGTTCTGGAGTAGTGTAGTCAATGGGGTGCTCTGGCCGTGGATTTTCTTGCTGATGCGCAAAGTCCGTCAGCAGTTTGCAGTGCAATAA", + "dna_sequence_length": 489, + "functions": [ + "cell wall structural complex MreBCD transmembrane component MreD" + ], + "id": "CDS_3193", + "location": [ + [ + "NC_000913", + 3398875, + "-", + 489 + ] + ], + "md5": "b8482cc7f0788c87474d4990e72d8a05", + "parent_gene": "", + "protein_md5": "80e07c188c1bb10742350560cbb3a770", + "protein_translation": "MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILLYWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQQALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFAVQ", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010658" + ], + [ + "gene_synonym", + "ECK3238" + ], + [ + "gene_synonym", + "EcoGene:EG10609" + ], + [ + "gene_synonym", + "GI:16131138" + ], + [ + "gene_synonym", + "GeneID:947655" + ], + [ + "gene_synonym", + "JW3219" + ], + [ + "gene_synonym", + "NP_417716.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16926" + ], + [ + "gene_synonym", + "b3250" + ], + [ + "gene_synonym", + "mreC" + ] + ], + "dna_sequence": "ATGAAGCCAATTTTTAGCCGTGGCCCGTCGCTACAGATTCGCCTTATTCTGGCGGTGCTGGTGGCGCTCGGCATTATTATTGCCGACAGCCGCCTGGGGACGTTCAGTCAAATCCGTACTTATATGGATACCGCCGTCAGTCCTTTCTACTTTGTTTCCAATGCTCCTCGTGAATTGCTGGATGGCGTATCGCAGACGCTGGCCTCGCGTGACCAATTAGAACTTGAAAACCGGGCGTTACGTCAGGAACTGTTGCTGAAAAACAGTGAACTGCTGATGCTTGGACAATACAAACAGGAGAACGCGCGTCTGCGCGAGCTGCTGGGTTCCCCGCTGCGTCAGGATGAGCAGAAAATGGTGACTCAGGTTATCTCCACGGTTAACGATCCTTATAGCGATCAAGTTGTTATCGATAAAGGTAGCGTTAATGGCGTTTATGAAGGCCAGCCGGTCATCAGCGACAAAGGTGTTGTTGGTCAGGTGGTGGCCGTCGCTAAACTGACCAGTCGCGTGCTGCTGATTTGTGATGCGACCCACGCGCTGCCAATCCAGGTGCTGCGCAACGATATCCGCGTAATTGCAGCCGGTAACGGTTGTACGGATGATTTGCAGCTTGAGCATCTGCCGGCGAATACGGATATTCGTGTTGGTGATGTGCTGGTGACTTCCGGTCTGGGCGGTCGTTTCCCGGAAGGCTATCCGGTCGCGGTTGTCTCTTCCGTAAAACTCGATACCCAGCGCGCTTATACTGTGATTCAGGCGCGTCCGACTGCAGGGCTGCAACGTTTGCGTTATCTGCTGCTGCTGTGGGGGGCAGATCGTAACGGCGCTAACCCGATGACGCCGGAAGAGGTGCATCGTGTTGCTAATGAACGTCTGATGCAGATGATGCCGCAGGTATTGCCTTCGCCAGACGCGATGGGGCCAAAGTTACCTGAACCGGCAACGGGGATCGCTCAGCCGACTCCGCAGCAACCGGCGACAGGAAATGCAGCTACTGCGCCTGCTGCGCCGACACAGCCTGCTGCTAATCGCTCTCCACAAAGGGCTACGCCGCCGCAAAGTGGTGCTCAACCGCCTGCGCGTGCGCCGGGAGGGCAATAG", 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[ + "gene_synonym", + "GI:16131143" + ], + [ + "gene_synonym", + "GeneID:947758" + ], + [ + "gene_synonym", + "JW3223" + ], + [ + "gene_synonym", + "NP_417721.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABD8" + ], + [ + "gene_synonym", + "accB" + ], + [ + "gene_synonym", + "b3255" + ], + [ + "gene_synonym", + "fabE" + ] + ], + "dna_sequence": "ATGGATATTCGTAAGATTAAAAAACTGATCGAGCTGGTTGAAGAATCAGGCATCTCCGAACTGGAAATTTCTGAAGGCGAAGAGTCAGTACGCATTAGCCGTGCAGCTCCTGCCGCAAGTTTCCCTGTGATGCAACAAGCTTACGCTGCACCAATGATGCAGCAGCCAGCTCAATCTAACGCAGCCGCTCCGGCGACCGTTCCTTCCATGGAAGCGCCAGCAGCAGCGGAAATCAGTGGTCACATCGTACGTTCCCCGATGGTTGGTACTTTCTACCGCACCCCAAGCCCGGACGCAAAAGCGTTCATCGAAGTGGGTCAGAAAGTCAACGTGGGCGATACCCTGTGCATCGTTGAAGCCATGAAAATGATGAACCAGATCGAAGCGGACAAATCCGGTACCGTGAAAGCAATTCTGGTCGAAAGTGGACAACCGGTAGAATTTGACGAGCCGCTGGTCGTCATCGAGTAA", + "dna_sequence_length": 471, + "functions": [ + "acetyl CoA carboxylase, BCCP subunit" + ], + "id": "CDS_3200", + "location": [ + [ + "NC_000913", + 3405436, + "+", + 471 + ] + ], + "md5": "28da7a424bb82ef71d3043cfb1c622b0", + "parent_gene": "", + "protein_md5": "36871dcfe1571efa43dd6a24b6f8caf0", + "protein_translation": "MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVMQQAYAAPMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE", + "protein_translation_length": 156, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010677" + ], + [ + "gene_synonym", + "ECK3243" + ], + [ + "gene_synonym", + "EcoGene:EG10276" + ], + [ + "gene_synonym", + "GI:16131144" + ], + [ + "gene_synonym", + "GeneID:947761" + ], + [ + "gene_synonym", + "JW3224" + ], + [ + "gene_synonym", + "NP_417722.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24182" + ], + [ + "gene_synonym", + "accC" + ], + [ + "gene_synonym", + "b3256" + ], + [ + "gene_synonym", + "fabG" + ] + ], + "dna_sequence": 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"ATGACGAAACATGCCAGGTTTTTCCTCCTGCCCTCCTTTATTCTGATCTCCGCGGCTTTAATCGCCGGTTGTAACGATAAGGGAGAAGAGAAAGCTCACGTCGGTGAACCGCAGGTTACCGTTCATATTGTAAAAACGGCCCCGTTAGAAGTTAAGACTGAATTACCAGGCCGCACCAATGCTTATCGTATAGCCGAAGTTCGCCCACAGGTTAGCGGGATCGTACTGAATCGCAATTTCACTGAAGGCAGCGATGTGCAAGCAGGCCAGTCCCTGTACCAGATCGATCCCGCGACCTATCAGGCAAATTATGACAGCGCGAAAGGCGAACTGGCGAAAAGTGAAGCCGCCGCCGCCATCGCGCATTTGACGGTAAAACGTTACGTTCCGCTCGTGGGTACGAAATACATCAGCCAGCAGGAGTACGACCAGGCCATTGCTGATGCTCGTCAGGCCGATGCCGCCGTGATTGCCGCAAAAGCCACAGTCGAAAGCGCTCGCATCAATCTTGCTTATACCAAAGTCACTGCGCCAATTAGCGGACGTATCGGCAAATCGACTGTGACCGAAGGCGCTCTTGTCACTAATGGGCAAACGACTGAACTGGCGACTGTCCAGCAGCTCGATCCTATCTACGTTGATGTGACCCAATCCAGCAACGATTTTATGAGGCTGAAGCAATCCGTAGAGCAAGGAAATTTGCATAAGGAAAACGCCACCAGCAACGTAGAGTTGGTCATGGAAAACGGTCAAACCTATCCCCTGAAAGGTACGCTGCAATTCTCCGATGTGACCGTTGATGAAAGCACCGGCTCCATAACCCTACGTGCTGTCTTCCCTAACCCGCAACATACGCTTTTGCCGGGTATGTTTGTGCGTGCACGGATTGATGAAGGCGTCCAACCTGACGCCATTCTTATCCCGCAACAAGGCGTTAGCCGCACACCGCGTGGTGATGCAACCGTGCTGATTGTTAACGATAAAAGTCAGGTTGAAGCGCGCCCTGTCGTTGCCAGTCAGGCGATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAA", + "dna_sequence_length": 1158, + "functions": [ + "cytoplasmic membrane lipoprotein" + ], + "id": "CDS_3210", + "location": [ + [ + "NC_000913", + 3413864, + "+", + 1158 + ] + ], + "md5": "03dde278326822c02a0bb742cf0a839f", + "parent_gene": "", + "protein_md5": "01051bed14d6f4398c6990af584e887e", + "protein_translation": "MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVTVHIVKTAPLEVKTELPGRTNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQANYDSAKGELAKSEAAAAIAHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAKATVESARINLAYTKVTAPISGRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQSSNDFMRLKQSVEQGNLHKENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLRAVFPNPQHTLLPGMFVRARIDEGVQPDAILIPQQGVSRTPRGDATVLIVNDKSQVEARPVVASQAIGDKWLISEGLKSGDQVIVSGLQKARPGEQVKATTDTPADTASK", + "protein_translation_length": 385, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010724" + ], + [ + "gene_synonym", + "ECK3253" + ], + [ + "gene_synonym", + "EcoGene:EG10267" + ], + [ + "gene_synonym", + "GI:16131154" + ], + [ + "gene_synonym", + "GeneID:947768" + ], + [ + "gene_synonym", + "JW3234" + ], + [ + "gene_synonym", + "NP_417732.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24181" + ], + [ + "gene_synonym", + "acrF" + ], + [ + "gene_synonym", + "b3266" + ], + [ + "gene_synonym", + "envD" + ] + ], + "dna_sequence": "ATGGCAAACTTTTTTATTCGACGACCGATATTTGCATGGGTGCTGGCCATTATTCTGATGATGGCGGGCGCACTGGCGATCCTACAATTGCCCGTCGCTCAGTATCCAACAATTGCACCGCCTGCGGTTTCTGTTTCAGCAAACTATCCGGGCGCTGATGCGCAGACCGTGCAGGATACGGTGACGCAGGTTATCGAACAGAATATGAACGGTATCGATAACCTGATGTATATGTCCTCCACCAGCGATTCCGCCGGTAGCGTGACAATTACCCTTACCTTCCAGTCCGGGACCGATCCTGATATCGCGCAAGTGCAGGTGCAGAACAAACTCCAGCTCGCCACGCCGTTGCTGCCGCAGGAGGTTCAGCAGCAGGGGATCAGTGTTGAAAAGTCCAGTAGCAGCTATTTGATGGTGGCGGGCTTTGTCTCTGATAACCCAGGCACCACACAGGACGATATCTCGGACTATGTGGCCTCTAACGTTAAAGATACGCTTAGCCGTCTGAATGGCGTCGGTGACGTACAGCTTTTCGGCGCACAGTATGCGATGCGTATCTGGCTGGATGCCGATCTGCTAAACAAATATAAACTGACACCGGTTGATGTGATTAACCAGTTGAAGGTACAGAACGATCAGATCGCTGCCGGACAGTTGGGCGGAACGCCAGCGTTACCAGGGCAACAATTGAACGCCTCGATTATTGCTCAGACGCGGTTTAAAAATCCGGAAGAATTCGGCAAAGTGACCCTGCGCGTAAACAGTGACGGCTCGGTGGTACGCCTGAAAGATGTCGCACGGGTTGAACTTGGCGGTGAAAACTATAACGTTATCGCTCGTATCAACGGAAAACCGGCGGCGGGCCTGGGGATTAAGCTGGCAACCGGCGCGAATGCTCTCGATACCGCGAAAGCCATTAAGGCAAAACTGGCGGAATTACAGCCATTCTTCCCGCAGGGAATGAAGGTTCTCTACCCTTATGACACCACGCCATTCGTCCAGCTTTCTATTCACGAAGTGGTAAAAACGCTGTTCGAAGCCATTATGCTGGTGTTCCTGGTGATGTATCTGTTCTTGCAGAATATGCGAGCAACGCTGATCCCCACCATTGCGGTACCCGTGGTGTTGTTAGGGACGTTTGCCATCCTCGCCGCTTTTGGTTACTCCATCAACACACTAACGATGTTCGGGATGGTGCTTGCCATCGGGCTGCTCGTCGATGATGCGATAGTGGTGGTGGAGAACGTCGAGCGCGTGATGATGGAGGATAAGCTCCCGCCAAAAGAAGCGACGGAAAAATCGATGTCGCAAATTCAGGGCGCACTGGTGGGTATCGCGATGGTGCTGTCAGCGGTATTTATTCCGATGGCATTCTTCGGCGGTTCTACTGGGGCAATTTATCGCCAGTTCTCTATCACCATCGTTTCGGCAATGGCGCTTTCTGTTCTGGTGGCATTGATTCTTACCCCTGCGTTATGTGCAACGCTGCTTAAACCCGTCTCTGCTGAGCATCACGAAAATAAGGGCGGTTTCTTCGGTTGGTTTAATACCACCTTCGATCATAGCGTTAACCACTACACCAACAGCGTCGGCAAAATCCTCGGATCCACAGGACGATATTTACTGATCTATGCGCTGATTGTTGCAGGAATGGTGGTGTTGTTTTTACGTCTTCCGTCTTCCTTCTTACCTGAAGAGGATCAGGGTGTCTTTCTGACCATGATTCAGTTACCCGCTGGCGCGACGCAAGAGCGGACGCAAAAAGTGTTGGATCAAGTTACGGATTACTATCTGAAGAACGAGAAAGCGAACGTTGAAAGTGTCTTTACGGTTAACGGCTTTAGCTTCAGCGGCCAGGCACAAAACGCCGGTATGGCCTTCGTCAGTCTGAAACCGTGGGAAGAGCGTAATGGTGACGAAAACAGTGCGGAAGCGGTAATCCATCGTGCCAAAATGGAATTGGGCAAGATCCGCGACGGTTTTGTCATTCCATTCAATATGCCAGCCATTGTTGAACTGGGCACGGCAACGGGTTTCGACTTTGAGTTAATTGATCAGGCTGGGCTGGGTCACGATGCCCTAACCCAGGCCCGTAACCAGTTGCTTGGTATGGCGGCGCAACATCCTGCCAGCTTAGTCAGCGTGCGCCCTAATGGCCTGGAAGACACCGCGCAGTTTAAACTGGAAGTTGACCAGGAAAAGGCGCAGGCATTAGGTGTTTCACTTTCTGACATCAATCAGACCATTTCAACGGCGCTGGGTGGGACTTACGTTAACGACTTCATCGACCGTGGCCGCGTGAAAAAGTTGTATGTTCAGGCGGATGCCAAATTCCGTATGCTGCCAGAAGATGTCGATAAACTTTATGTCCGCAGCGCCAACGGCGAAATGGTGCCATTCTCGGCCTTTACCACTTCACATTGGGTGTATGGCTCTCCGCGACTGGAACGCTACAACGGTCTGCCGTCAATGGAGATTCAGGGGGAAGCCGCGCCAGGAACCAGTTCCGGCGATGCCATGGCGTTGATGGAAAACCTTGCGTCAAAATTACCTGCGGGCATTGGTTATGACTGGACGGGTATGTCGTATCAGGAACGCTTATCGGGAAACCAGGCTCCCGCTCTGGTAGCAATTTCCTTTGTGGTTGTTTTCCTGTGCCTTGCTGCACTCTATGAAAGCTGGTCAATTCCTGTCTCGGTTATGTTGGTAGTGCCGTTAGGGATTGTCGGCGTGCTGCTGGCGGCGACACTCTTTAATCAAAAAAATGACGTCTACTTTATGGTGGGCTTGCTAACGACAATTGGCTTGTCGGCCAAAAACGCTATTTTGATCGTTGAGTTCGCTAAAGATCTCATGGAGAAAGAGGGTAAAGGTGTTGTTGAAGCGACACTGATGGCAGTACGTATGCGTCTGCGTCCTATCCTGATGACCTCTCTCGCCTTTATTCTCGGCGTATTACCGCTAGCTATCAGTAACGGTGCCGGCAGTGGCGCGCAGAACGCTGTGGGTATCGGGGTAATGGGAGGAATGGTCTCTGCAACGTTGCTGGCAATCTTCTTCGTACCGGTGTTCTTTGTGGTGATCCGCCGTTGCTTTAAAGGATAA", 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"MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVSVSANYPGADAQTVQDTVTQVIEQNMNGIDNLMYMSSTSDSAGSVTITLTFQSGTDPDIAQVQVQNKLQLATPLLPQEVQQQGISVEKSSSSYLMVAGFVSDNPGTTQDDISDYVASNVKDTLSRLNGVGDVQLFGAQYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQLGGTPALPGQQLNASIIAQTRFKNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYNVIARINGKPAAGLGIKLATGANALDTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQLSIHEVVKTLFEAIMLVFLVMYLFLQNMRATLIPTIAVPVVLLGTFAILAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMMEDKLPPKEATEKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATLLKPVSAEHHENKGGFFGWFNTTFDHSVNHYTNSVGKILGSTGRYLLIYALIVAGMVVLFLRLPSSFLPEEDQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKNEKANVESVFTVNGFSFSGQAQNAGMAFVSLKPWEERNGDENSAEAVIHRAKMELGKIRDGFVIPFNMPAIVELGTATGFDFELIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGLEDTAQFKLEVDQEKAQALGVSLSDINQTISTALGGTYVNDFIDRGRVKKLYVQADAKFRMLPEDVDKLYVRSANGEMVPFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAMALMENLASKLPAGIGYDWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSVMLVVPLGIVGVLLAATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVVEATLMAVRMRLRPILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFFVPVFFVVIRRCFKG", + "protein_translation_length": 1034, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010728" + ], + [ + "gene_synonym", + "ECK3254" + ], + [ + "gene_synonym", + "EcoGene:EG12833" + ], + [ + "gene_synonym", + "GI:16131155" + ], + [ + "gene_synonym", + "GeneID:947767" + ], + [ + "gene_synonym", + "JW3235" + ], + [ + "gene_synonym", + "NP_417733.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64622" + ], + [ + "gene_synonym", + "b3267" + ], + [ + "gene_synonym", + "yhdV" + ] + ], + "dna_sequence": "ATGAAAAGATTAATTCCTGTGGCATTGCTCACCGCATTGCTGGCGGGCTGTGCTCACGATTCGCCCTGCGTTCCGGTTTATGACGATCAGGGTCGTCTGGTTCACACCAATACCTGTATGAAAGGCACGACTCAGGATAACTGGGAAACGGCTGGGGCTATTGCCGGCGGGGCAGCTGCTGTTGCTGGCCTGACGATGGGGATCATCGCTCTATCGAAATAA", + "dna_sequence_length": 222, + "functions": [ + "putative outer membrane protein" + ], + "id": "CDS_3212", + "location": [ + [ + "NC_000913", + 3418390, + "+", + 222 + ] + ], + "md5": "c6894cafa9068f849b58b01a946840a4", + "parent_gene": "", + "protein_md5": "8a1c0a537e4d96325b599a8f31971dc6", + "protein_translation": "MKRLIPVALLTALLAGCAHDSPCVPVYDDQGRLVHTNTCMKGTTQDNWETAGAIAGGAAAVAGLTMGIIALSK", + "protein_translation_length": 73, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010731" + ], + [ + "gene_synonym", + "ECK3255" + ], + [ + "gene_synonym", + "EcoGene:EG12834" + ], + [ + "gene_synonym", + "GeneID:947766" + ], + [ + "gene_synonym", + "JW3236" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45766" + ], + [ + "gene_synonym", + "b3268" + ], + [ + "gene_synonym", + "yhdW" + ] + ], + "dna_sequence": "ATGAAAAAGATGATGATAGCCACACTGGCTGCCGCCAGCGTGCTGCTTGCCGTTGCAAATCAGGCGGCTGCTGGCGCGACGCTTGATGCCGTTCAGAAAAAAGGTTTTGTGCAATGCGGGATCAGTGATGGATTACCTGGGTTCTCTTATGCCGATGCTGACGGTAAGTTTTCAGGTATTGATGTTGATATTTGTCGTGGTGTTGCCGCTGCTGTATTTGGTGACGACACGAAAGTGAAATATACCCCGCTCACTGCAAAAGAACGCTTCACCGCTTTACAGTCAGGGGAGGTGGATTTGCTCTCCCGTAATACGACCTGGACTTCATCTCGCGATGCCGGGATGGGAATGGCATTTACCGGCGTCACTTATTACGACGGCATTGGCTTCCTGACGCACGATAAAGCGGGGCTAAAAAGCGCGAAAGAACTGGATGGCGCTACCGTCTGTATTCAGGCGGGTACTGATACCGAACTCAACGTCGCCGACTACTTCAAGGCAAACAATATGAAGTACACACCGGTGACTTTCGATCGCTCTGACGAATCAGCGAAGGCACTGGAATCTGGTCGCTGCGATACGCTGGCCTCGGATCAATCACAACTGTATGCCCTGCGCATCAAATTAAGCAACCCAGCTGAATGGATTGTCTTACCGGAAGTTATCTCAAAAGAACCGCTTGGTCCGGTAGTTCGTCGTGGCGATGATGAATGGTTCTCGATTGTACGCTGGACGCTTTTCGCCATGCTGAATGCTGAAGAGATGGGCATCAATTCCCAGAACGTCGATGAAAAAGCGGCTAATCCAGCAACGCCTGATATGGCACATCTGCTGGGTAAAGAAGGCGATTACGGCAAGGATCTGAAGCTGGATAATAAATGGGCCTATAACATCATCAAACAGGTGGGTAACTACTCGGAAATTTTTGAGCGTAACGTAGGTTCAGAAAGCCCGCTGAAAATTAAACGTGGGCAAAATAATCTCTGGAATAACGGCGGTATTCAGTACGCACCGCCCGTGCGTTAA", + "dna_sequence_length": 1026, + "id": "CDS_3213", + "location": [ + [ + "NC_000913", + 3419042, + "+", + 66 + ], + [ + "NC_000913", + 3419107, + "+", + 960 + ] + ], + "md5": "7d641a9d0fe4360ee224f5968090587a", + "parent_gene": "", + "protein_md5": "3417c2ed076970fa0b84ae9d3b83cb68", + "protein_translation": "MKKMMIATLAAASVLLAVANQAAAGATLDAVQKKGFVQCGISDGLPGFSYADADGKFSGIDVDICRGVAAAVFGDDTKVKYTPLTAKERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIKRGQNNLWNNGGIQYAPPVR", + "protein_translation_length": 341, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010733" + ], + [ + "gene_synonym", + "ECK3256" + ], + [ + "gene_synonym", + "EcoGene:EG12835" + ], + [ + "gene_synonym", + "GI:49176333" + ], + [ + "gene_synonym", + "GeneID:947765" + ], + [ + "gene_synonym", + "JW5544" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45767" + ], + [ + "gene_synonym", + "YP_026209.1" + ], + [ + "gene_synonym", + "b3269" + ], + [ + "gene_synonym", + "yhdX" + ] + ], + "dna_sequence": "ATGTCTCATCGCCGCTCAACCGTTAAAGGCTCACTCTCTTTTGCCAACCCTACGGTTCGCGCCTGGTTATTCCAGATCCTTGCCGTTGTTGCTGTTGTCGGCATTGTTGGTTGGTTATTTCACAACACTGTAACGAATCTCAATAATCGTGGCATTACTTCAGGTTTTGCCTTTCTGGATCGCGGCGCTGGCTTCGGTATTGTCCAGCATTTGATCGATTACCAGCAGGGCGACACCTACGGACGCGTTTTTATTGTCGGCTTACTCAATACGCTACTGGTTTCTGCATTGTGTATTGTGTTCGCTTCTGTTTTGGGCTTCTTTATCGGTCTGGCGAGACTTTCGGATAACTGGCTGCTACGAAAGCTTTCCACAATTTATATTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTGGGAGACGGATTTATTGCGTTTATCCTGGCTGTTGTTATGGCTATAGTCCTTTCTGTTGGGCTATTCCGCTTTAATAAAACATACCAGATAAAGACCGGACAACTGCGCCGCACCTGGCCGATCGCCGCAGTGTTGATCATTGGTTTGCCTTTACTGGCGCAATGGCTTTTTGGCGCAGCACTACACTGGGATGTCCCAGCCCTACGAGGCTTTAACTTCCGCGGCGGGATGGTTTTAATTCCTGAACTGGCAGCCTTAACGCTGGCACTTTCGGTTTATACATCTGCATTTATCGCCGAGATTATCCGCGCTGGGATCCAGGCAGTGCCTTATGGTCAACATGAAGCGGCTCGGTCACTGGGATTACCCAACCCGGTTACGCTACGCCAGGTCATTATTCCCCAGGCATTGCGGGTGATTATTCCACCGTTAACCAGCCAGTATCTCAACATCGTCAAAAACTCCTCTCTTGCCGCCGCTATTGGCTATCCCGATATGGTTTCGCTGTTTGCCGGCACCGTGCTGAATCAGACGGGGCAAGCCATCGAGACGATAGCCATGACCATGTCGGTCTATCTGATTATCAGCCTGACTATCTCGCTGCTGATGAATATCTATAACCGCCGCATCGCGATCGTTGAACGCTAA", 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"gene_synonym", + "GeneID:947764" + ], + [ + "gene_synonym", + "JW5545" + ], + [ + "gene_synonym", + "NP_417736.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45768" + ], + [ + "gene_synonym", + "b3270" + ], + [ + "gene_synonym", + "yhdY" + ] + ], + "dna_sequence": "ATGACAAAAGTATTGCTGTCTCATCCCCCGCGCCCGGCGAGCCATAACTCAAGCCGCGCGATGGTGTGGGTGCGAAAAAATCTGTTCTCCAGCTGGAGCAATAGCCTGCTGACTATTGGCTGCATATGGTTGATGTGGGAACTGATCCCACCGTTGCTGAACTGGGCATTTTTGCAGGCTAACTGGGTTGGCTCAACGCGTGCCGACTGCACAAAAGCCGGTGCCTGTTGGGTCTTCATCCACGAACGATTTGGTCAGTTTATGTATGGGCTTTACCCACACGACCAACGCTGGCGAATTAACCTCGCATTACTGATTGGGCTTGTGTCGATCGCACCAATGTTCTGGAAAATACTCCCGCATCGCGGTCGCTATATTGCGGCCTGGGCGGTGATTTACCCACTGATTGTCTGGTGGCTGATGTATGGCGGTTTTTTTGCTCTTGAGCGGGTTGAAACCCGGCAATGGGGCGGGCTGACGCTAACTTTAATTATTGCATCAGTTGGGATTGCGGGGGCGCTACCGTGGGGGATCTTACTGGCGTTAGGTCGCCGCTCCCATATGCCGATTGTGCGTATCTTATCGGTCATTTTTATCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGCGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAACTCAGGGGCTGGTTATTCTGCCACAGGCGTTGAAGCTGGTAATTCCTGGGCTGGTAAATACCATCATCGCACTCTTCAAAGATACCAGCCTGGTGATCATTATCGGGTTGTTCGATCTTTTCAGTAGCGTTCAGCAGGCAACCGTTGATCCCGCCTGGTTGGGTATGTCGACGGAAGGGTATGTTTTCGCCGCGCTGATCTACTGGATCTTCTGTTTCAGCATGTCGCGCTATAGCCAGTATCTGGAAAAACGTTTTAACACCGGGCGTACACCGCATTGA", 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"gene_synonym", + "GeneID:947818" + ], + [ + "gene_synonym", + "JW3281" + ], + [ + "gene_synonym", + "NP_417778.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P60723" + ], + [ + "gene_synonym", + "b3319" + ], + [ + "gene_synonym", + "eryA" + ], + [ + "gene_synonym", + "rplD" + ] + ], + "dna_sequence": "ATGGAATTAGTATTGAAAGACGCGCAGAGCGCGCTGACTGTTTCCGAAACTACCTTCGGTCGTGATTTCAACGAAGCGCTGGTTCACCAGGTTGTTGTTGCTTATGCAGCTGGTGCTCGTCAGGGTACTCGTGCTCAGAAGACTCGTGCTGAAGTAACTGGTTCCGGTAAAAAACCGTGGCGCCAGAAAGGCACCGGCCGTGCGCGTTCTGGTTCTATCAAGAGCCCGATCTGGCGTTCTGGTGGCGTGACCTTTGCTGCTCGTCCGCAGGACCACAGTCAAAAAGTTAACAAGAAGATGTACCGCGGCGCGCTGAAAAGCATCCTGTCCGAACTGGTACGTCAGGATCGTCTGATCGTTGTCGAGAAGTTCTCTGTAGAAGCGCCGAAAACTAAGCTGCTGGCACAGAAACTGAAAGACATGGCTCTGGAAGATGTGCTGATCATCACCGGTGAGCTGGACGAAAACCTGTTCCTGGCTGCGCGCAACCTGCACAAGGTTGACGTACGCGATGCAACTGGTATCGACCCGGTTAGCCTGATCGCCTTCGACAAAGTCGTAATGACTGCTGATGCTGTTAAGCAAGTTGAGGAGATGCTGGCATGA", + "dna_sequence_length": 606, + "functions": [ + "50S ribosomal subunit protein 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"MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA", + "protein_translation_length": 209, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010862" + ], + [ + "gene_synonym", + "ECK3308" + ], + [ + "gene_synonym", + "EcoGene:EG10909" + ], + [ + "gene_synonym", + "GI:16131200" + ], + [ + "gene_synonym", + "GeneID:947816" + ], + [ + "gene_synonym", + "JW3283" + ], + [ + "gene_synonym", + "NP_417780.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7R5" + ], + [ + "gene_synonym", + "b3321" + ], + [ + "gene_synonym", + "nusE" + ], + [ + "gene_synonym", + "rpsJ" + ] + ], + "dna_sequence": 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"2427fa926b1ea8d625f1f3117e0d9721", + "parent_gene": "", + "protein_md5": "b6987b79a52b79d39ea0a6d578485e58", + "protein_translation": "MFEFYIAAREQKETGHPGIFSRQKHSTIIYVICLLLICLWFAGMVLVGGYARQLWVLWIVKAEVTVEAETPAFKQSTQHYFFKKQPLPVVESVEEEDDPGVAVENAPSSSEDEENTVEESEEKAGLRERVKNALNELER", + "protein_translation_length": 139, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010867" + ], + [ + "gene_synonym", + "ECK3310" + ], + [ + "gene_synonym", + "EcoGene:EG12888" + ], + [ + "gene_synonym", + "GI:16131202" + ], + [ + "gene_synonym", + "GeneID:947825" + ], + [ + "gene_synonym", + "JW3285" + ], + [ + "gene_synonym", + "NP_417782.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45756" + ], + [ + "gene_synonym", + "b3323" + ], + [ + "gene_synonym", + "gspA" + ], + [ + "gene_synonym", + "yheD" + ] + ], + "dna_sequence": "ATGTCTACGAGAAGAGAAGTTATTCTTTCCTGGTTGTGTGAGAAACGTCAAACCTGGCGTCTATGCTATTTGTTGGGTGAGGCTGGAAGTGGAAAAACCTGGCTGGCGCAGCAACTGCAAAAAGATAAACATCGCCGTGTGATTACTTTAAGCCTCGTTGTTTCCTGGCAAGGTAAGGCCGCATGGATCGTTACCGACGATAACGCGGCTGAACAGGGCTGCCGTGACAGCGCCTGGACGCGAGATGAGATGGCGGGGCAATTACTGCATGCGCTTCATCGAACTGATAGTCGCTGCCCTCTTATTATTATTGAAAATGCTCACCTGAATCACCGCCGCATACTTGATGATCTCCAACGCGCAATATCTCTTATTCCTGACGGTCAATTTTTGCTGATCGGCAGACCCGATCGAAAAGTCGAACGTGATTTTAAAAAACAGGGCATTGAACTTGTCTCGATAGGACGTCTGACGGAGCACGAACTTAAGGCAAGCATCCTTGAAGGTCAGAATATTGACCAACCCGATCTCCTTTTAACCGCCAGAGTTCTGAAACGGATAGCTTTATTATGTCGGGGCGATCGCAGAAAGCTGGCGCTTGCCGGCGAAACAATTCGCTTATTACAGCAAGCCGAGCAGACCAGCGTTTTCACAGCAAAACAATGGCGAATGATTTACCGCATATTGGGTGATAACCGCCCCCGGAAAATGCAGCTTGCCGTGGTGATGAGTGGAACCATTATCGCTCTTACCTGTGGTTGGCTACTGCTGTCCTCTTTTACAGCTACGTTACCCGTTCCTGCGTGGCTGATACCCGTAACGCCAGTAGTTAAACAAGATATGACTAAGGATATTGCTCATGTGGTGATGCGCGATAGTGAGGCGCTAAGCGTGTTATACGGCGTATGGGGGTACGAGGTCCCAGCTGATTCGGCCTGGTGCGATCAGGCAGTAAGAGCGGGGCTGGCATGTAAAAGTGGGAATGCTTCTTTACAAACATTGGTAGATCAGAATTTGCCCTGGATCGCATCGCTTAAAGTCGGGGACAAAAAATTGCCTGTTGTGGTCGTTCGCGTCGGTGAGGCTAGCGTTGATGTCCTCGTAGGTCAGCAAACGTGGACGCTGACACATAAATGGTTTGAGTCGGTATGGACGGGTGATTATCTTCTGTTGTGGAAAATGTCGCCGGAAGGGGAGAGTACCATTACGCGTGATAGCAGCGAGGAAGAGATTCTCTGGCTGGAAACGATGTTAAACCGCGCATTGCATATTTCGACAGAACCTTCGGCGGAGTGGCGTCCCTTGTTGGTAGAAAAAATAAAGCAATTTCAAAAAAGCCACCACTTGAAAACTGACGGTGTTGTTGGCTTTTCAACGTTAGTACATCTCTGGCAGGTGGCAGGGGAGAGTGCCTACTTATATCGGGATGAAGCAAATATTTCCCCGGAAACAACAGTGAAGGGGAAATGA", 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"gene_synonym", + "EcoGene:EG12889" + ], + [ + "gene_synonym", + "GI:16131203" + ], + [ + "gene_synonym", + "GeneID:947824" + ], + [ + "gene_synonym", + "JW3286" + ], + [ + "gene_synonym", + "NP_417783.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45757" + ], + [ + "gene_synonym", + "b3324" + ], + [ + "gene_synonym", + "gspC" + ], + [ + "gene_synonym", + "yheE" + ] + ], + "dna_sequence": "GTGCCCACACTACGTTTCCCCTTCCATCTGGCGAATCATAATAAAGATGCTGCCATCAATATATTGATTATATTTATAAGCATAGGGTCGATTATTTTTAATGTGAATTATTTCCATACAACTATAGTTAAAAATGGACAGATCATTAATCAACCAACAAACGCATTTCAGTCTGATTTCAGCCTTGCCGCTTTATGGCGTAACGAAAATCATGCTGGGGTAAAAGATGCAAATCCCGTGGCAGTTAATCAGGAAACACCTAAGCTCTCTATAGCGCTTAATGGCATTGTACTCACATCGAATGATGAGACTTCTTTTGTCTTAATTAATGAGGGGAGCGAACAAAAGCGATACTCCCTCAACGAAGCCCTTGAGTCAGCGCCGGGAACGTTTATTAGAAAAATAAATAAAACCAGCGTTGTGTTTGAAACTCACGGGCATTACGAAAAAGTAACTCTCCATCCAGGGCTACCTGACATCATCAAGCAGCCTGATTCAGAAAGTCAAAATGTACTCGCTGATTATATTATCGCCACGCCTATACGTGATGGAGAACAGATATACGGGCTTCGATTGAACCCTCGTAAGGGCCTCAATGCATTTACCACCAGCTTGCTACAACCAGGGGATATCGCCCTCAGGATCAATAATCTTTCGCTGACCCACCCTGATGAGGTTTCACAGGCATTAAGTTTACTGCTAACTCAACAAAGTGCTCAGTTTACAATTCGTCGCAACGGCGTACCCCGCTTGATAAATGTTTCCGTCGGGGAACTTACAGGAATGAATGGACTGCGTCATGAAAGGACTCAATAA", + "dna_sequence_length": 816, + "functions": [ + "general secretory pathway component, cryptic" + ], + "id": "CDS_3262", + "location": [ + [ + "NC_000913", + 3455578, + "+", + 816 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"ECK3318" + ], + [ + "gene_synonym", + "EcoGene:EG12893" + ], + [ + "gene_synonym", + "GI:16131210" + ], + [ + "gene_synonym", + "GeneID:947832" + ], + [ + "gene_synonym", + "JW3293" + ], + [ + "gene_synonym", + "NP_417790.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45761" + ], + [ + "gene_synonym", + "b3331" + ], + [ + "gene_synonym", + "gspJ" + ], + [ + "gene_synonym", + "yheI" + ] + ], + "dna_sequence": 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"protein_translation_length": 158, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010906" + ], + [ + "gene_synonym", + "ECK3324" + ], + [ + "gene_synonym", + "EcoGene:EG11181" + ], + [ + "gene_synonym", + "GI:16131216" + ], + [ + "gene_synonym", + "GeneID:947836" + ], + [ + "gene_synonym", + "JW3299" + ], + [ + "gene_synonym", + "NP_417796.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE56" + ], + [ + "gene_synonym", + "b3337" + ], + [ + "gene_synonym", + "bfd" + ], + [ + "gene_synonym", + "yheA" + ] + ], + "dna_sequence": "ATGTACGTTTGTCTTTGTAATGGTATCAGCGATAAAAAAATTCGTCAGGCTGTGCGCCAGTTTTCCCCTCACTCGTTCCAGCAATTAAAAAAATTTATTCCGGTCGGCAATCAGTGCGGTAAATGTGTCCGGGCCGCGCGTGAAGTGATGGAGGATGAATTAATGCAGCTGCCGGAGTTTAAGGAGTCCGCATAA", + "dna_sequence_length": 195, + "functions": [ + "bacterioferritin-associated ferredoxin" + ], + "id": "CDS_3275", + "location": [ + [ + "NC_000913", + 3466991, + "-", + 195 + ] + ], + "md5": "541f02820c779ec2f478fe185cacd1b0", + "parent_gene": "", + "protein_md5": "f7eedf512dcd2ecef19d0652fbafd476", + "protein_translation": "MYVCLCNGISDKKIRQAVRQFSPHSFQQLKKFIPVGNQCGKCVRAAREVMEDELMQLPEFKESA", + "protein_translation_length": 64, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010909" + ], + [ + "gene_synonym", + "ECK3325" + ], + [ + "gene_synonym", + "EcoGene:EG11237" + ], + [ + "gene_synonym", + "GI:16131217" + ], + [ + "gene_synonym", + "GeneID:947837" + ], + [ + "gene_synonym", + "JW3300" + ], + [ + "gene_synonym", + "NP_417797.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P13656" + ], + [ + "gene_synonym", + "b3338" + ], + [ + "gene_synonym", + "chiA" + ], + [ + "gene_synonym", + "yheB" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG12898" + ], + [ + "gene_synonym", + "GI:16131224" + ], + [ + "gene_synonym", + "GeneID:947852" + ], + [ + "gene_synonym", + "JW3307" + ], + [ + "gene_synonym", + "NP_417804.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45532" + ], + [ + "gene_synonym", + "b3345" + ], + [ + "gene_synonym", + "tusD" + ], + [ + "gene_synonym", + "yheN" + ] + ], + "dna_sequence": "ATGCGTTTTGCCATCGTGGTGACCGGGCCAGCATACGGTACGCAACAGGCGAGTAGTGCTTTTCAGTTTGCGCAGGCGCTGATAGCAGATGGCCATGAGTTAAGCAGCGTCTTTTTCTATCGGGAAGGGGTCTATAACGCTAACCAATTGACCTCTCCGGCAAGTGACGAATTTGACCTCGTACGGGCCTGGCAACAACTGAATGCGCAACATGGTGTGGCGCTGAATATCTGCGTAGCGGCAGCATTACGCCGTGGCGTTGTTGATGAAACGGAGGCCGGAAGACTGGGGCTGGCTTCGTCAAACCTTCAGCAGGGATTTACCTTAAGCGGACTTGGGGCGCTGGCGGAAGCCTCGCTGACCTGTGACAGGGTGGTACAGTTCTGA", + "dna_sequence_length": 387, + "functions": [ + "sulfurtransferase for 2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis" + ], + "id": "CDS_3283", + "location": [ + [ + "NC_000913", + 3475718, + "-", + 387 + ] + ], + "md5": "f35d205b78cf12ff6aba1ec2f0a7366a", + "parent_gene": "", + "protein_md5": "832ff651a910cda1590a0fc26ef4aba5", + "protein_translation": "MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVYNANQLTSPASDEFDLVRAWQQLNAQHGVALNICVAAALRRGVVDETEAGRLGLASSNLQQGFTLSGLGALAEASLTCDRVVQF", + "protein_translation_length": 128, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0010936" + ], + [ + "gene_synonym", + "ECK3333" + ], + [ + "gene_synonym", + "EcoGene:EG12899" + ], + [ + "gene_synonym", + "GI:90111573" + ], + [ + "gene_synonym", + "GeneID:947851" + ], + [ + "gene_synonym", + "JW5703" + ], + [ + "gene_synonym", + "NP_417805.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64624" + ], + [ + "gene_synonym", + "b3346" + ], + [ + "gene_synonym", + "yheO" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:947888" + ], + [ + "gene_synonym", + "JW5696" + ], + [ + "gene_synonym", + "NP_417841.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P45551" + ], + [ + "gene_synonym", + "b3382" + ], + [ + "gene_synonym", + "yhfY" + ] + ], + "dna_sequence": "ATGGAAACCAGACTCAACCTGCTTTGCGAGGCAGGCGTTATTGATAAGGACATCTGCAAAGGCATGATGCAGGTCGTCAACGTACTGGAAACAGAGTGCCATCTGCCGGTGCGCAGTGAGCAAGGAACGATGGCGATGACACATATGGCGAGTGCACTGATGCGCAGTCGCCGTGGTGAAGAAATAGAGCCGCTGGATAACGAGTTGCTGGCAGAACTGGCGCAATCCAGCCACTGGCAAGCCGTTGTGCAATTGCATCAGGTGTTGTTGAAGGAATTCGCACTGGAAGTTAACCCGTGTGAAGAAGGCTATTTGCTGGCCAACCTTTATGGATTATGGATGGCTGCTAACGAAGAGGTTTGA", + "dna_sequence_length": 363, + "functions": [ + "PRD domain protein" + ], + "id": "CDS_3320", + "location": [ + [ + "NC_000913", + 3511422, + "-", + 363 + ] + ], + "md5": "2f76b63ba6ea59a3af36e3d4bda6eccf", + "parent_gene": "", + "protein_md5": "6a08bdde1ce1a7aea4f29bc619d2f285", + "protein_translation": 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"gene_synonym", + "NP_417844.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32662" + ], + [ + "gene_synonym", + "b3385" + ], + [ + "gene_synonym", + "gph" + ], + [ + "gene_synonym", + "yhfE" + ] + ], + "dna_sequence": "ATGAATAAGTTTGAAGATATTCGCGGCGTCGCTTTTGATCTTGATGGTACGCTGGTCGACAGTGCTCCTGGTCTTGCTGCTGCGGTAGATATGGCGCTGTATGCGCTGGAGTTGCCCGTCGCAGGTGAAGAACGCGTTATTACCTGGATTGGTAACGGCGCAGATGTTCTGATGGAGCGCGCATTGACCTGGGCGCGTCAGGAACGTGCGACTCAGCGTAAAACAATGGGTAAACCGCCCGTTGATGACGACATTCCGGCAGAAGAACAGGTACGTATTCTGCGTAAACTGTTCGATCGCTACTATGGCGAGGTTGCCGAAGAGGGGACGTTTTTGTTCCCGCACGTTGCCGATACGTTGGGCGCGTTGCAGGCTAAAGGCCTGCCGCTAGGCCTGGTCACCAACAAACCGACGCCGTTCGTCGCGCCGCTGCTCGAAGCCTTAGATATCGCCAAATACTTCAGCGTGGTGATTGGTGGTGATGATGTGCAAAACAAAAAACCGCATCCGGACCCGCTGTTACTGGTGGCTGAGCGGATGGGAATTGCCCCACAACAGATGCTGTTTGTCGGCGACTCACGCAATGATATTCAGGCGGCAAAAGCGGCAGGTTGCCCATCAGTTGGCTTAACCTACGGATATAACTACGGCGAGGCTATCGATCTCAGCCAGCCTGATGTAATTTATCAGTCTATAAATGACCTTCTGCCCGCATTAGGGCTTCCGCATAGCGAAAATCAGGAATCGAAAAATGACTAA", + 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"UniProtKB/Swiss-Prot:P0AG07" + ], + [ + "gene_synonym", + "b3386" + ], + [ + "gene_synonym", + "dod" + ], + [ + "gene_synonym", + "rpe" + ], + [ + "gene_synonym", + "yhfD" + ] + ], + "dna_sequence": "ATGAAACAGTATTTGATTGCCCCCTCAATTCTGTCGGCTGATTTTGCCCGCCTGGGTGAAGATACCGCAAAAGCCCTGGCAGCTGGCGCTGATGTCGTGCATTTTGACGTCATGGATAACCACTATGTTCCCAATCTGACGATTGGGCCAATGGTGCTGAAATCCTTGCGTAACTATGGCATTACCGCCCCTATCGACGTACACCTGATGGTGAAACCCGTCGATCGCATTGTGCCTGATTTCGCTGCCGCTGGTGCCAGCATCATTACCTTTCATCCAGAAGCCTCCGAGCATGTTGACCGCACGCTGCAACTGATTAAAGAAAATGGCTGTAAAGCGGGTCTGGTATTTAACCCGGCGACACCTCTGAGCTATCTGGATTACGTGATGGATAAGCTGGATGTGATCCTGCTGATGTCCGTCAACCCTGGTTTCGGCGGTCAGTCTTTCATTCCTCAAACACTGGATAAACTGCGCGAAGTACGTCGCCGTATCGACGAGTCTGGCTTTGACATTCGACTAGAAGTGGACGGTGGCGTGAAGGTGAACAACATTGGCGAAATCGCTGCGGCGGGCGCGGATATGTTCGTCGCCGGTTCGGCAATCTTCGACCAGCCAGACTACAAAAAAGTCATTGATGAAATGCGCAGTGAACTGGCAAAGGTAAGTCATGAATAA", + "dna_sequence_length": 678, + "functions": [ + "D-ribulose-5-phosphate 3-epimerase" + ], + "id": "CDS_3324", + 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"ATGTCACAACCTATTTTTAACGATAAGCAATTTCAGGAAGCGCTTTCACGTCAGTGGCAGCGTTATGGCTTAAATTCTGCGGCTGAAATGACTCCTCGCCAGTGGTGGCTAGCAGTGAGTGAAGCACTGGCCGAAATGCTGCGTGCTCAGCCATTCGCCAAGCCGGTGGCGAATCAGCGACATGTTAACTACATCTCAATGGAGTTTTTGATTGGTCGCCTGACGGGCAACAACCTGTTGAATCTCGGCTGGTATCAGGATGTACAGGATTCGTTGAAGGCTTATGACATCAATCTGACGGACCTGCTGGAAGAAGAGATCGACCCGGCGCTGGGTAACGGTGGTCTGGGACGTCTGGCGGCGTGCTTCCTCGACTCAATGGCAACTGTCGGTCAGTCTGCGACGGGTTACGGTCTGAACTATCAATATGGTTTGTTCCGCCAGTCTTTTGTCGATGGCAAACAGGTTGAAGCGCCGGATGACTGGCATCGCAGTAACTACCCGTGGTTCCGCCACAACGAAGCACTGGATGTGCAGGTAGGGATTGGCGGTAAAGTGACGAAAGACGGACGCTGGGAGCCGGAGTTTACCATTACCGGTCAAGCGTGGGATCTCCCCGTTGTCGGCTATCGTAATGGCGTGGCGCAGCCGCTGCGTCTGTGGCAGGCGACGCACGCGCATCCGTTTGATCTGACTAAATTTAACGACGGTGATTTCTTGCGTGCCGAACAGCAGGGCATCAATGCGGAAAAACTGACCAAAGTTCTCTATCCAAACGACAACCATACTGCCGGTAAAAAGCTGCGCCTGATGCAGCAATACTTCCAGTGTGCCTGTTCGGTAGCGGATATTTTGCGTCGCCATCATCTGGCGGGGCGTAAACTGCACGAACTGGCGGATTACGAAGTTATTCAGCTGAACGATACCCACCCAACTATCGCGATTCCAGAACTGCTGCGCGTGCTGATCGATGAGCACCAGATGAGCTGGGATGACGCCTGGGCCATTACCAGCAAAACTTTCGCTTACACCAACCATACCCTGATGCCAGAAGCGCTGGAACGCTGGGATGTGAAACTGGTGAAAGGCTTACTGCCGCGCCACATGCAGATTATTAACGAAATTAATACTCGCTTTAAAACGCTGGTAGAGAAAACCTGGCCGGGCGATGAAAAAGTGTGGGCCAAACTGGCGGTGGTGCACGACAAACAAGTGCATATGGCGAACCTGTGTGTGGTTGGCGGTTTCGCGGTGAACGGTGTTGCGGCGCTGCACTCGGATCTGGTGGTGAAAGATCTGTTCCCGGAATATCACCAGCTATGGCCGAACAAATTCCATAACGTCACCAACGGTATTACCCCACGTCGCTGGATCAAACAGTGCAACCCGGCACTGGCGGCTCTGTTGGATAAATCACTGCAAAAAGAGTGGGCTAACGATCTCGATCAGCTGATCAATCTGGAAAAATTCGCTGATGATGCGAAATTCCGTCAGCAATATCGCGAGATCAAGCAGGCGAATAAAGTCCGTCTGGCGGAGTTTGTGAAAGTTCGTACCGGTATTGAGATCAATCCACAGGCGATTTTCGATATTCAGATCAAACGTTTGCATGAGTACAAACGCCAGCACCTGAATCTGCTGCATATTCTGGCGTTGTACAAAGAAATTCGTGAAAACCCGCAGGCTGATCGCGTACCGCGCGTCTTCCTCTTCGGCGCGAAAGCGGCACCGGGCTACTACCTGGCGAAGAATATTATCTTTGCGATCAACAAAGTGGCTGACGTGATCAACAACGATCCGCTGGTTGGCGATAAGTTGAAGGTGGTGTTCCTGCCGGATTATTGCGTTTCGGCGGCGGAAAAACTGATCCCGGCGGCGGATATCTCCGAACAAATTTCGACTGCAGGTAAAGAAGCTTCCGGTACCGGCAATATGAAACTGGCGCTCAATGGTGCGCTTACTGTCGGTACGCTGGATGGGGCGAACGTTGAAATCGCCGAGAAAGTCGGTGAAGAAAATATCTTTATTTTTGGTCATACCGTGGAACAAGTGAAGGCAATTCTGGCCAAAGGCTACGACCCGGTGAAATGGCGGAAGAAAGATAAGGTGCTGGACGCAGTATTGAAAGAGCTGGAAAGCGGTAAATACAGCGACGGCGATAAGCATGCCTTCGACCAGATGCTGCACAGTATCGGCAAACAGGGCGGCGATCCGTATCTGGTGATGGCGGATTTCGCAGCCTATGTAGAGGCACAAAAGCAGGTGGATGTGCTGTACCGCGACCAGGAGGCCTGGACTCGCGCGGCGATCCTCAATACCGCCCGCTGCGGTATGTTTAGCTCGGATCGCTCTATTCGCGATTATCAGGCTCGTATCTGGCAGGCAAAACGCTAA", + "dna_sequence_length": 2394, + "functions": [ + "maltodextrin phosphorylase" + ], + "id": "CDS_3355", + "location": [ + [ + "NC_000913", + 3552473, + "-", + 2394 + ] + ], + "md5": "cfdf238a74279c4a179b44eff28eb0d0", + "parent_gene": "", + "protein_md5": "73f9cc844db1d636d0c25f1a7990353e", + "protein_translation": "MSQPIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPVANQRHVNYISMEFLIGRLTGNNLLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR", + "protein_translation_length": 797, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011162" + ], + [ + "gene_synonym", + "ECK3405" + ], + [ + "gene_synonym", + "EcoGene:EG10562" + ], + [ + "gene_synonym", + "GI:16131294" + ], + [ + "gene_synonym", + "GeneID:947921" + ], + [ + "gene_synonym", + "JW3381" + ], + [ + "gene_synonym", + "NP_417877.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06993" + ], + [ + "gene_synonym", + "b3418" + ], + [ + "gene_synonym", + "malA" + ], + [ + "gene_synonym", + "malT" + ] + ], + "dna_sequence": "ATGCTGATTCCGTCAAAACTAAGTCGTCCGGTTCGACTCGACCATACCGTGGTTCGTGAGCGCCTGCTGGCTAAACTTTCCGGCGCGAACAACTTCCGGCTGGCGCTGATCACGAGTCCTGCGGGCTACGGAAAGACCACCCTCATTTCCCAGTGGGCGGCAGGCAAAAACGATATCGGCTGGTACTCGCTGGATGAAGGTGATAACCAGCAAGAGCGTTTCGCCAGCTATCTCATTGCCGCCGTGCAGCAGGCAACCAACGGTCACTGTGCGATATGTGAGACGATGGCGCAAAAACGGCAATATGCCAGCCTGACGTCACTCTTCGCCCAGCTTTTCATTGAGCTGGCGGAATGGCATAGCCCACTTTATCTGGTCATCGATGACTATCATCTGATCACTAATCCAGTGATCCACGAGTCAATGCGCTTCTTTATTCGCCATCAACCAGAAAATCTCACCCTGGTGGTGTTGTCACGCAACCTTCCGCAACTGGGCATTGCCAATCTGCGTGTTCGTGATCAACTGCTGGAAATTGGCAGTCAGCAACTGGCATTTACCCATCAGGAAGCGAAGCAGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCCCTCATCACCCGTGTGACCGGCGAAGAAAACGGGCAAATGCGCCTCGAAGAGATTGAGCGTCAGGGGCTGTTTTTACAGCGGATGGATGATACCGGCGAGTGGTTCTGCTATCACCCGCTGTTTGGTAACTTCCTGCGCCAGCGCTGCCAGTGGGAACTGGCGGCGGAGCTGCCGGAAATCCACCGTGCCGCCGCAGAAAGCTGGATGGCCCAGGGATTTCCCAGCGAAGCAATTCATCATGCGCTGGCGGCAGGCGATGCGCTGATGCTGCGCGATATTCTGCTTAATCACGCCTGGAGTCTGTTCAACCATAGCGAACTGTCGCTGCTGGAAGAGTCGCTTAAGGCCCTGCCGTGGGACAGCTTGCTGGAAAATCCGCAGTTGGTGTTATTGCAGGCGTGGCTGATGCAAAGCCAACATCGCTACGGCGAAGTTAACACCCTGCTAGCCCGTGCTGAACATGAAATCAAGGACATCAGAGAAGACACCATGCACGCAGAATTTAACGCTCTGCGCGCCCAGGTGGCGATTAACGATGGTAATCCGGATGAAGCGGAACGGCTGGCAAAACTGGCACTGGAAGAGCTGCCGCCGGGCTGGTTCTATAGCCGCATTGTGGCAACCTCGGTGCTGGGTGAAGTGCTGCACTGCAAAGGCGAATTGACCCGCTCACTGGCGCTAATGCAGCAAACCGAACAGATGGCACGCCAGCACGATGTCTGGCACTACGCTTTGTGGAGTTTAATCCAGCAAAGTGAAATTCTGTTTGCCCAAGGGTTCCTGCAAACCGCGTGGGAAACGCAGGAAAAAGCATTCCAGCTGATCAACGAGCAGCATCTGGAACAGCTGCCAATGCATGAGTTTCTGGTGCGCATTCGTGCGCAGCTGTTATGGGCCTGGGCGCGGCTGGATGAAGCCGAAGCGTCGGCGCGTAGCGGGATTGAAGTCTTGTCGTCTTATCAGCCACAGCAACAGCTTCAGTGCCTGGCAATGTTGATTCAATGCTCGCTGGCCCGTGGTGATTTAGATAACGCCCGTAGCCAGCTGAACCGTCTGGAAAACCTGCTGGGGAATGGCAAATATCACAGCGACTGGATCTCTAACGCCAACAAAGTCCGGGTGATTTACTGGCAAATGACCGGCGATAAAGCCGCCGCTGCCAACTGGTTGCGTCATACGGCTAAACCAGAGTTTGCGAACAACCACTTCCTGCAAGGTCAATGGCGCAACATTGCCCGTGCACAAATCTTGCTGGGCGAGTTTGAACCGGCAGAAATTGTTCTCGAAGAACTCAATGAAAATGCCCGGAGTCTGCGGTTGATGAGCGATCTCAACCGTAACCTGTTGCTGCTTAATCAACTGTACTGGCAGGCCGGACGTAAAAGTGACGCCCAGCGCGTGTTGCTGGACGCATTAAAACTGGCGAATCGCACCGGATTTATCAGCCATTTTGTCATCGAAGGCGAAGCGATGGCGCAACAACTGCGTCAGCTGATTCAGCTTAATACGCTGCCGGAACTGGAACAGCATCGCGCGCAGCGTATTCTGCGAGAAATCAATCAACATCATCGGCATAAATTCGCCCATTTCGATGAGAATTTCGTTGAACGTCTGCTAAATCATCCTGAAGTACCTGAACTGATCCGCACCAGCCCGCTGACGCAACGTGAATGGCAGGTACTGGGGCTGATCTACTCTGGTTACAGCAATGAGCAAATTGCCGGAGAACTGGAAGTCGCGGCAACCACCATCAAAACGCATATCCGCAATCTGTATCAGAAACTCGGCGTGGCCCATCGCCAGGATGCGGTACAACACGCCCAGCAATTGCTGAAGATGATGGGGTACGGCGTGTAA", + "dna_sequence_length": 2706, + "functions": [ + "mal regulon transcriptional activator" + ], + "id": "CDS_3356", + "location": [ + [ + "NC_000913", + 3553085, + "+", + 2706 + ] + ], + "md5": "bfba302a0dda4eb32cab2c288034a7e0", + "parent_gene": "", + "protein_md5": "56b536cd02ed8a727acb9142344361a3", + "protein_translation": "MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYGKTTLISQWAAGKNDIGWYSLDEGDNQQERFASYLIAAVQQATNGHCAICETMAQKRQYASLTSLFAQLFIELAEWHSPLYLVIDDYHLITNPVIHESMRFFIRHQPENLTLVVLSRNLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRLSSPIEAAESSRICDDVSGWATALQLIALSARQNTHSAHKSARRLAGINASHLSDYLVDEVLDNVDLATRHFLLKSAILRSMNDALITRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFCYHPLFGNFLRQRCQWELAAELPEIHRAAAESWMAQGFPSEAIHHALAAGDALMLRDILLNHAWSLFNHSELSLLEESLKALPWDSLLENPQLVLLQAWLMQSQHRYGEVNTLLARAEHEIKDIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRILREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQREWQVLGLIYSGYSNEQIAGELEVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYGV", + "protein_translation_length": 901, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0174104" + ], + [ + "gene_synonym", + "ECK3406" + ], + [ + "gene_synonym", + "EcoGene:EG12938" + ], + [ + "gene_synonym", + "GI:49176352" + ], + [ + "gene_synonym", + "GeneID:2847707" + ], + [ + "gene_synonym", + "JW5688" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46849" + ], + [ + "gene_synonym", + "YP_026219.1" + ], + [ + "gene_synonym", + "b4475" + ], + [ + "gene_synonym", + "rtcA" + ], + [ + "gene_synonym", + "yhgJ" + ], + [ + "gene_synonym", + "yhgK" + ] + ], + "dna_sequence": "ATGAAAAGGATGATTGCGCTGGATGGCGCACAGGGCGAAGGTGGCGGGCAGATCCTGCGCTCGGCGCTGAGCCTGTCGATGATAACCGGCCAGCCATTTACCATCACCAGCATTCGTGCCGGGCGGGCGAAACCGGGGCTGTTGCGCCAGCATCTGACCGCGGTAAAGGCGGCGACGGAAATTTGCGGAGCAACCGTGGAAGGCGCGGAGCTGGGGTCGCAGCGTCTGCTCTTCCGGCCCGGCACCGTGCGCGGCGGCGATTACCGCTTTGCTATCGGTAGCGCCGGAAGTTGTACGCTGGTGCTGCAAACGGTGCTGCCCGCGCTGTGGTTTGCCGATGGACCTTCGCGTGTTGAAGTGAGCGGCGGCACCGATAACCCGTCGGCGCCGCCTGCGGATTTTATCCGCCGGGTGCTGGAGCCGCTGCTGGCGAAAATAGGAATTCATCAGCAAACCACGCTGTTACGCCACGGTTTTTACCCTGCCGGAGGCGGTGTGGTGGCAACGGAAGTCTCGCCCGTGGCATCGTTTAACACCTTGCAACTTGGCGAGCGCGGGAACATTGTGCAGATGCGTGGAGAAGTTCTATTAGCTGGTGTGCCGCGCCATGTTGCTGAGCGTGAAATCGCTACACTGGCGGGGAGTTTTTCCCTGCATGAACAGAATATTCATAACCTGCCGCGCGACCAGGGGCCGGGTAATACCGTCTCGCTTGAAGTCGAAAGTGAAAATATCACCGAACGCTTTTTTGTCGTCGGTGAAAAGCGCGTCAGTGCCGAGGTGGTTGCGGCACAGTTGGTGAAAGAGGTGAAACGCTACCTGGCAAGCACGGCGGCGGTGGGGGAATATCTTGCTGACCAACTGGTGCTACCGATGGCGCTGGCGGGCGCGGGGGAATTTACGGTCGCCCATCCCTCATGCCATCTGCTGACCAATATCGCGGTGGTGGAGCGTTTCTTGCCGGTGCGGTTTAGTTTGATAGAAACAGATGGCGTAACGCGGGTGAGCATTGAATGA", + "dna_sequence_length": 1017, + "functions": [ + "RNA 3'-terminal phosphate cyclase" + ], + "id": "CDS_3357", + "location": [ + [ + "NC_000913", + 3556849, + "-", + 1017 + ] + ], + "md5": "d250a328eb6f29cd4bf7b9ca2efcca85", + "parent_gene": "", + "protein_md5": "0022a6fb53681a7580a4d825014021f4", + "protein_translation": "MKRMIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIETDGVTRVSIE", + "protein_translation_length": 338, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011170" + ], + [ + "gene_synonym", + "ECK3407" + ], + [ + "gene_synonym", + "EcoGene:EG12939" + ], + [ + "gene_synonym", + "GI:16131295" + ], + [ + "gene_synonym", + "GeneID:947929" + ], + [ + "gene_synonym", + "JW3384" + ], + [ + "gene_synonym", + "NP_417879.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46850" + ], + [ + "gene_synonym", + "b3421" + ], + [ + "gene_synonym", + "rtcB" + ], + [ + "gene_synonym", + "yhgL" + ] + ], + "dna_sequence": "ATGAATTACGAATTACTGACCACTGAAAATGCCCCGGTAAAAATGTGGACCAAAGGCGTGCCGGTAGAGGCCGATGCGCGTCAGCAACTTATTAATACGGCGAAGATGCCGTTTATTTTCAAACATATTGCGGTAATGCCTGATGTACACCTGGGTAAAGGTTCCACCATTGGTAGCGTGATCCCGACCAAAGGGGCGATTATTCCGGCGGCGGTGGGCGTGGATATTGGCTGTGGAATGAACGCGCTGCGTACCGCGTTAACGGCGGAAGACCTGCCTGAAAACCTGGCAGAGCTGCGTCAGGCGATTGAAACGGCCGTGCCGCACGGGCGTACCACTGGCCGTTGTAAACGTGATAAAGGTGCCTGGGAAAATCCACCTGTTAACGTCGATGCTAAATGGGCTGAGCTTGAAGCCGGTTATCAGTGGTTAACGCAAAAATATCCCCGTTTCCTGAATACCAATAACTATAAACACCTGGGAACGCTGGGAACCGGTAACCACTTTATTGAAATCTGCCTTGATGAGTCGGACCAGGTGTGGATTATGCTGCACTCCGGTTCACGCGGAATTGGTAACGCCATCGGGACTTACTTTATCGATCTGGCACAAAAAGAGATGCAGGAAACGCTTGAGACGTTGCCGTCGCGTGATCTGGCGTACTTTATGGAAGGTACGGAATACTTTGATGATTACCTGAAAGCCGTGGCCTGGGCGCAGCTTTTTGCCAGCCTTAACCGCGATGCGATGATGGAAAACGTGGTAACGGCATTGCAGAGCATTACGCAGAAAACGGTCAGACAGCCACAAACGCTGGCGATGGAAGAGATCAACTGTCACCACAACTATGTGCAAAAAGAACAGCACTTTGGTGAAGAGATCTACGTGACGCGTAAAGGCGCGGTGTCTGCGCGTGCTGGTCAATATGGAATTATTCCCGGTTCGATGGGAGCAAAAAGCTTTATCGTCCGTGGGCTGGGAAATGAAGAGTCGTTCTGTTCGTGCAGCCACGGTGCCGGGCGGGTAATGAGCCGAACTAAAGCGAAAAAACTGTTCAGCGTGGAAGATCAAATTCGTGCCACCGCGCATGTGGAATGCCGTAAAGATGCCGAAGTGATCGACGAAATCCCGATGGCGTATAAAGATATTGATGCGGTGATGGCGGCACAAAGCGATCTGGTGGAAGTTATCTATACCCTGCGTCAGGTGGTGTGCGTAAAAGGATAA", + "dna_sequence_length": 1227, + "functions": [ + "RNA-splicing ligase" + ], + "id": "CDS_3358", + "location": [ + [ + "NC_000913", + 3558079, + "-", + 1227 + ] + ], + "md5": "6c67854dc9ab00fc4df4a83704af23eb", + "parent_gene": "", + "protein_md5": "8520236d05a6afc2774df1b44cc8a47f", + "protein_translation": "MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIAVMPDVHLGKGSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQAIETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHLGTLGTGNHFIEICLDESDQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRDLAYFMEGTEYFDDYLKAVAWAQLFASLNRDAMMENVVTALQSITQKTVRQPQTLAMEEINCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMAAQSDLVEVIYTLRQVVCVKG", + "protein_translation_length": 408, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011174" + ], + [ + "gene_synonym", + "ECK3408" + ], + [ + "gene_synonym", + "EcoGene:EG12356" + ], + [ + "gene_synonym", + "GI:16131296" + ], + [ + "gene_synonym", + "GeneID:947928" + ], + [ + "gene_synonym", + "JW3385" + ], + [ + "gene_synonym", + "NP_417880.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P38035" + ], + [ + "gene_synonym", + "b3422" + ], + [ + "gene_synonym", + "rtcR" + ], + [ + "gene_synonym", + "yhgB" + ] + ], + "dna_sequence": 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"GI:16131305" + ], + [ + "gene_synonym", + "GeneID:947941" + ], + [ + "gene_synonym", + "JW3394" + ], + [ + "gene_synonym", + "NP_417889.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P15067" + ], + [ + "gene_synonym", + "b3431" + ], + [ + "gene_synonym", + "glgX" + ] + ], + "dna_sequence": 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"protein_translation_length": 657, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011209" + ], + [ + "gene_synonym", + "ECK3418" + ], + [ + "gene_synonym", + "EcoGene:EG10378" + ], + [ + "gene_synonym", + "GI:16131306" + ], + [ + "gene_synonym", + "GeneID:947940" + ], + [ + "gene_synonym", + "JW3395" + ], + [ + "gene_synonym", + "NP_417890.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07762" + ], + [ + "gene_synonym", + "b3432" + ], + [ + "gene_synonym", + "glgB" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:947939" + ], + [ + "gene_synonym", + "JW3396" + ], + [ + "gene_synonym", + "NP_417891.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9Q9" + ], + [ + "gene_synonym", + "asd" + ], + [ + "gene_synonym", + "b3433" + ], + [ + "gene_synonym", + "dap" + ], + [ + "gene_synonym", + "hom" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW3402" + ], + [ + "gene_synonym", + "NP_417896.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46852" + ], + [ + "gene_synonym", + "b3439" + ], + [ + "gene_synonym", + "yhhW" + ] + ], + "dna_sequence": "ATGATCTACTTACGCAAAGCAAATGAACGTGGTCATGCAAATCATGGCTGGCTGGACTCCTGGCATACTTTCTCTTTTGCCAACTATTACGATCCGAACTTTATGGGCTTCTCCGCGCTGCGCGTGATTAACGACGACGTGATTGAAGCAGGGCAGGGCTTCGGCACTCACCCGCATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTTGAGCATCAGGACAGCATGGGCAATAAAGAGCAGGTTCCGGCGGGTGAGTTCCAGATTATGAGTGCTGGTACGGGTATTCGTCACTCAGAGTACAACCCAAGCAGCACCGAGCGTCTGCATCTGTATCAGATCTGGATCATGCCTGAAGAAAACGGTATTACGCCGCGTTATGAACAGCGTCGCTTCGATGCCGTACAGGGCAAACAGCTGGTGCTCTCGCCGGATGCGCGAGATGGTTCATTGAAAGTGCATCAGGATATGGAACTGTACCGCTGGGCGTTGCTGAAAGATGAGCAGTCGGTGCATCAGATTGCCGCTGAACGCCGCGTCTGGATCCAGGTGGTGAAAGGCAATGTCACCATTAACGGCGTGAAAGCCTCGACCAGCGATGGTCTGGCAATCTGGGATGAGCAGGCAATCTCCATCCATGCGGATAGCGACAGCGAAGTGTTACTGTTCGATCTGCCGCCGGTTTAA", + "dna_sequence_length": 696, + "functions": [ + "quercetinase activity 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"5d8fd3de559e92be1c9ef0c239fa637b", + "protein_translation": "MSEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQERLADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVADFGICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDAYYMARVK", + "protein_translation_length": 162, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011244" + ], + [ + "gene_synonym", + "ECK3428" + ], + [ + "gene_synonym", + "EcoGene:EG12946" + ], + [ + "gene_synonym", + "GI:16131314" + ], + [ + "gene_synonym", + "GeneID:947952" + ], + [ + "gene_synonym", + "JW3406" + ], + [ + "gene_synonym", + "NP_417899.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P46855" + ], + [ + "gene_synonym", + "b3442" + ], + [ + "gene_synonym", + "yhhZ" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16131329" + ], + [ + "gene_synonym", + "GeneID:947965" + ], + [ + "gene_synonym", + "JW3422" + ], + [ + "gene_synonym", + "NP_417914.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEX7" + ], + [ + "gene_synonym", + "b3457" + ], + [ + "gene_synonym", + "hrbB" + ], + [ + "gene_synonym", + "hrbC" + ], + [ + "gene_synonym", + "hrbD" + ], + [ + "gene_synonym", + "livH" + ] + ], + "dna_sequence": 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amino acid ABC transporter permease" + ], + "id": "CDS_3393", + "location": [ + [ + "NC_000913", + 3596403, + "-", + 927 + ] + ], + "md5": "810adac079d457a5883b3ff53e7f40b6", + "parent_gene": "", + "protein_md5": "f3b3126d27a413d02b5c6fee54c114c0", + "protein_translation": "MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTGWLLVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSFALLILVLLVMPTGILGRPEVEKV", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011292" + ], + [ + "gene_synonym", + "ECK3442" + ], + [ + "gene_synonym", + "EcoGene:EG10540" + ], + [ + "gene_synonym", + "GI:16131330" + ], + [ + "gene_synonym", + "GeneID:947964" + ], + [ + "gene_synonym", + "JW3423" + ], + [ + "gene_synonym", + "NP_417915.1" + ], + [ + "gene_synonym", + 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"gene_synonym", + "ECK3466" + ], + [ + "gene_synonym", + "EcoGene:EG10847" + ], + [ + "gene_synonym", + "GI:49176361" + ], + [ + "gene_synonym", + "GeneID:947994" + ], + [ + "gene_synonym", + "JW5679" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16917" + ], + [ + "gene_synonym", + "YP_026224.1" + ], + [ + "gene_synonym", + "b3482" + ], + [ + "gene_synonym", + "rhsB" + ] + ], + "dna_sequence": "ATGAGCGGAAAACCGGCGGCGCGTCAGGGTGACATGACGCAGTATGGCGGTAGCATTGTTCAGGGTTCAGCCGGGGTACGTATTGGTGCCCCCACCGGCGTGGCCTGTTCGGTGTGCCCCGGCGGAGTGACGTCCGGCCATCCGGTCAATCCCCTGCTCGGTGCAAAGGTCCTTCCCGGTGAAACCGACATCGCCCTGCCCGGCCCGCTGCCGTTCATCCTCTCCCGCACCTACAGCAGTTACCGGACAAAAACGCCCGCGCCGGTGGGGAGCCTCGGCCCCGGCTGGAAAATGCCTGCGGATATCCGCTTACAGCTGCGCGATAACACACTGATACTCAGTGATAACGGCGGCAGAAGCCTGTATTTTGAGCACCTGTTTCCCGGTGAGGACGGTTACAGCCGCAGCGAGTCACTGTGGCTGGTGCGCGGCGGCGTGGCGAAACTGGATGAAGGTCACCGGCTGGCCGCACTCTGGCAGGCGCTGCCGGAAGAACTCCGCTTAAGTCCGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCGGAAGCGGATGAGGTGCTGCCTGCGCCGCTGCCGCCGTACCGGGTACTGACCGGGCTGGTGGACCGCTTCGGGCGCACACAGACGTTCCACCGCGAAGCCGCCGGTGAATTCAGCGGCGAAATCACCGGCGTGACGGATGGTGCCTGGCGTCACTTCCGGCTGGTACTGACCACGCAGGCGCAGCGGGCAGAAGAAGCCCGGCAGCAGGCCATTTCCGGCGGGACGGAACCGTCCGCTTTTCCTGATACCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCACCATCACCGACAGCCTGGACCGCCGTGAAGTGCTGCACACGCAGGGCGAAGCCGGGCTGAAGCGGGTGGTGAAAAAGGAACACGCGGACGGCAGCGTCACGCAGAGTCAGTTTGACGCCGTGGGCAGGCTCAGGGCACAGACGGATGCCGCAGGCAGGACAACAGAGTACAGCCCGGATGTGGTGACGGGCCTCATCACGCGCATAACCACGCCGGATGGCAGGGCATCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCCACCGGCAGCCGGAAAACCATGACGTGGAGCCGTTACGGTCAGTTGCTGAGCTTCACCGACTGTTCCGGTTATGTAACCCGTTATGACCATGACCGCTTCGGGCAGATGACGGCGGTGCACCGCGAGGAAGGGCTGAGTCAGTACCGCGCATACGACAGCCGTGGACAGTTAATTGCCGTGAAAGACACGCAGGGCCATGAAACGCGGTATGAATACAACATCGCCGGTGACCTGACCGCCGTCATTGCCCCGGACGGCAGCAGAAACGGGACACAGTACGATGCGTGGGGAAAGGCCGTCCGTACCACGCAGGGCGGGCTGACGCGCAGTATGGAATACGATGCTGCCGGACGGGTCATCCGCCTGACCAGTGAAAACGGCAGCCACACCACCTTCCGTTACGATGTACTTGACCGGCTGATACAGGAAACCGGCTTTGACGGCCGCACACAGCGTTATCACCACGACCTGACCGGCAAACTTATCCGCAGCGAGGATGAGGGTCTGGTCACCCACTGGCACTATGACGAAGCAGACCGCCTCACGCACCGCACCGTGAAGGGTGAAACCGCAGAGCGGTGGCAGTATGACGAACGTGGCTGGCTGACAGACATCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACGGAAGCACTGCTCTGGCAGCATGAGACCAGACATGCGTACAACGCGCAGGGGCTGGCGAACCGCTGTATACCGGACAGCCTGCCCGCCGTGGAATGGCTGACCTACGGCAGCGGTTACCTGGCAGGCATGAAACTCGGCGACACACCGCTGGTGGAGTACACCCGCGACCGCCTGCACCGGGAAACGCTGCGCAGCTTCGGCCGTTATGAACTCACCACCGCTTATACCCCTGCCGGGCAGTTACAGAGCCAGCACCTGAACAGCCTGCTGTCTGACCGCGATTACACCTGGAACGACAACGGCGAACTCATCCGCATCAGCAGCCCGCGCCAGACCCGGAGTTACAGCTACAGCACCACCGGCAGGCTGACCGGCGTTCACACCACCGCAGCGAATCTGGATATCCGCATCCCGTATGCCACAGACCCGGCAGGTAACCGCCTGCCCGACCCGGAGCTGCACCCGGACAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTACGGCTGGGACGGCGACCGGCTGACCACGATACAGAACGACAGGAGCCGCATCCAGACGATTTATCAGCCGGGGAGCTTCACGCCACTCATCAGGGTCGAAACTGCCACCGGTGAGCTGGCGAAAACGCAGCGCCGCAGCCTGGCGGATGCCCTTCAGCAGTCCGGCGGCGAAGACGGTGGCAGTGTGGTGTTCCCGCCGGTGCTGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTGTACACGCCGGCGCGAAAAATCCACCTGTACCACTGCGACCATCGCGGCCTGCCGCTGGCGCTCATCAGCACGGAAGGGGCAACAGCGTGGTGCGCAGAATATGATGAATGGGGCAACCTGCTGAATGAAGAGAACCCGCATCAGCTGCAGCAGCTTATCCGGCTGCCGGGGCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGATATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAACCTGTATGGATATCAATTGAATCCGATATCAGACATCGACCCCCTGGGTTTATCTATGTGGGAGGATGCAAAATCGGGGGCATGTACTAATGGTCTTTGCGGCACACTATCCGCTATGATAGGTCCAGATAAATTTGATTCTATAGATAGCACCGCATATGACGCCTTAAATAAAATAAATAGCCAATCTATTTGCGAAGATAAAGAGTTCGCTGGTTTAATATGTAAGGATAATAGTGGCAGATATTTCTCAACAGCACCTAACCGAGGAGAAAGAAAAGGATCATATCCATTCAATAGCCCTTGCCCTAATGGTACTGAGAAAGTATCAGCTTATCATACTCATGGTGCAGATAGTCATGGAGAATATTGGGACGAAATATTTTCAGGTAAAGATGAGAAAATAGTTAAAAGTAAAGATAACAATATCAAGTCATTTTATTTAGGTACGCCCAGTGGTAATTTTAAAGCAATAGATAACCACGGGAAGGAAATAACAAACAGAAAAGGATTACCTAATGTCTGCAGAGTTCATGGTAATATGTAA", 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"MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACSVCPGGVTSGHPVNPLLGAKVLPGETDIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRLQLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDGAWRHFRLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRGELAVVYDRSGKQVRSFTYDDKYRGRMVAHRHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLDRREVLHTQGEAGLKRVVKKEHADGSVTQSQFDAVGRLRAQTDAAGRTTEYSPDVVTGLITRITTPDGRASAFYYNHHNQLTSATGPDGLELRREYDELGRLIQETAPDGDITRYRYDNPHSDLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQMTAVHREEGLSQYRAYDSRGQLIAVKDTQGHETRYEYNIAGDLTAVIAPDGSRNGTQYDAWGKAVRTTQGGLTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSEDEGLVTHWHYDEADRLTHRTVKGETAERWQYDERGWLTDISHISEGHRVAVHYRYDEKGRLTGERQTVHHPQTEALLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGYLAGMKLGDTPLVEYTRDRLHRETLRSFGRYELTTAYTPAGQLQSQHLNSLLSDRDYTWNDNGELIRISSPRQTRSYSYSTTGRLTGVHTTAANLDIRIPYATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGRLTEKTDLIPEGVIRTDDERTHRYHYDSQHRLVHYTRTQYEEPLVESRYLYDPLGRRVAKRVWRRERDLTGWMSLSRKPQVTWYGWDGDRLTTIQNDRSRIQTIYQPGSFTPLIRVETATGELAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRWLASCGLTVEQMQNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGNLLNEENPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNLYGYQLNPISDIDPLGLSMWEDAKSGACTNGLCGTLSAMIGPDKFDSIDSTAYDALNKINSQSICEDKEFAGLICKDNSGRYFSTAPNRGERKGSYPFNSPCPNGTEKVSAYHTHGADSHGEYWDEIFSGKDEKIVKSKDNNIKSFYLGTPSGNFKAIDNHGKEITNRKGLPNVCRVHGNM", 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protein for polymorphic toxin RhsB" + ], + "id": "CDS_3419", + "location": [ + [ + "NC_000913", + 3623399, + "+", + 384 + ] + ], + "md5": "179df13dcd005e7c330e8ef91b38e675", + "parent_gene": "", + "protein_md5": "b63fb11714ba2af00abcadccf55dc08f", + "protein_translation": "MSAEFMVICKKILFRNCVIVSLFVFTYNTWAQCNNNIKIMRKYESEGKYTVRNLVKNKAIALELAEIYVKNRYGQDAAEEEKPYEITELTTSWVVEGTIHSDQIAGGVFIIEIGKNDGRILNFGHGK", + "protein_translation_length": 127, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0285073" + ], + [ + "gene_synonym", + "ECK3468" + ], + [ + "gene_synonym", + "EcoGene:EG14369" + ], + [ + "gene_synonym", + "GeneID:1450291" + ], + [ + "gene_synonym", + "JW5678" + ], + [ + "gene_synonym", + "b4552" + ], + [ + "gene_synonym", + "yrhC" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW5677" + ], + [ + "gene_synonym", + "NP_417942.6" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGH1" + ], + [ + "gene_synonym", + "b3485" + ], + [ + "gene_synonym", + "yhhJ" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0011385" + ], + [ + "gene_synonym", + "ECK3472" + ], + [ + "gene_synonym", + "EcoGene:EG12224" + ], + [ + "gene_synonym", + "GI:16131359" + ], + [ + "gene_synonym", + "GeneID:948003" + ], + [ + "gene_synonym", + "JW3454" + ], + [ + "gene_synonym", + "NP_417944.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37626" + ], + [ + "gene_synonym", + "b3487" + ], + [ + "gene_synonym", + "yhiI" + ] + ], + "dna_sequence": "ATGGATAAGAGTAAGCGCCATCTGGCGTGGTGGGTTGTCGGGTTACTGGCGGTGGCGGCTATCGTGGCGTGGTGGCTGTTGCGCCCGGCAGGTGTGCCGGAAGGCTTTGCTGTCAGTAATGGGCGCATTGAAGCGACGGAAGTGGATATTGCCAGCAAAATTGCCGGGCGTATCGACACCATTCTGGTGAAAGAAGGCAAGTTTGTTCGCGAAGGTGAAGTGCTGGCGAAGATGGATACTCGCGTGTTGCAGGAACAGCGACTGGAAGCCATCGCGCAAATCAAAGAGGCACAAAGCGCCGTTGCTGCCGCGCAGGCTTTGCTGGAGCAACGACAAAGCGAAACTCGTGCCGCACAGTCGCTGGTTAATCAACGCCAGGCAGAACTGGACTCCGTAGCAAAACGTCATACGCGTTCCCGTTCACTGGCCCAACGAGGGGCTATTTCTGCGCAACAGCTGGATGACGATCGCGCCGCCGCTGAGAGCGCCCGAGCTGCGCTGGAATCGGCGAAAGCTCAGGTATCGGCTTCTAAAGCGGCTATAGAAGCGGCACGCACCAATATCATTCAGGCGCAAACCCGCGTCGAAGCGGCACAAGCCACTGAACGGCGCATTGCCGCAGATATCGATGACAGCGAACTGAAAGCCCCGCGTGACGGACGCGTGCAGTATCGGGTTGCCGAGCCAGGCGAAGTGCTGGCGGCAGGCGGTCGGGTGCTGAATATGGTCGATCTCAGCGACGTCTATATGACTTTCTTCCTGCCAACCGAACAGGCGGGCACGCTGAAACTGGGCGGTGAAGCCCGGCTGATCCTCGATGCCGCGCCAGATCTGCGTATTCCTGCAACCATCAGTTTTGTCGCCAGTGTCGCCCAGTTCACGCCAAAAACCGTCGAAACCAGCGATGAACGGCTGAAACTGATGTTCCGCGTCAAAGCGCGTATCCCACCGGAATTACTCCAGCAGCATCTGGAATATGTCAAAACCGGTTTGCCGGGCGTAGCGTGGGTGCGGGTGAATGAAGAACTTCCGTGGCCTGACGACCTCGTGGTGAGGTTGCCGCAATGA", 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], + [ + "gene_synonym", + "JW3455" + ], + [ + "gene_synonym", + "NP_417945.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37627" + ], + [ + "gene_synonym", + "b3488" + ], + [ + "gene_synonym", + "yhiJ" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0011393" + ], + [ + "gene_synonym", + "ECK3475" + ], + [ + "gene_synonym", + "EcoGene:EG12227" + ], + [ + "gene_synonym", + "GeneID:947999" + ], + [ + "gene_synonym", + "JW5674" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37629" + ], + [ + "gene_synonym", + "b4660" + ], + [ + "gene_synonym", + "yhiK" + ], + [ + "gene_synonym", + "yhiL" + ] + ], + "dna_sequence": 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"ECK3476" + ], + [ + "gene_synonym", + "EcoGene:EG12228" + ], + [ + "gene_synonym", + "GI:226524753" + ], + [ + "gene_synonym", + "GeneID:947997" + ], + [ + "gene_synonym", + "JW5944" + ], + [ + "gene_synonym", + "NP_417948.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37630" + ], + [ + "gene_synonym", + "b3491" + ], + [ + "gene_synonym", + "yhiM" + ] + ], + "dna_sequence": "GTGAACATATATATCGGGTGGCTTTTCAAATTAATCCCTTTGATTATGGGCTTAATTTGTATCGCGTTAGGTGGCTTTGTGCTGGAAAGTTCAGGGCAAAGCGAGTATTTCGTCGCGGGTCATGTGCTGATTTCTCTGGCGGCCATATGCCTGGCATTATTCACTACCGCATTTATTATCATTTCGCAGCTCACGCGCGGCGTTAATACGTTTTACAATACATTGTTCCCCATTATTGGCTATGCGGGGTCAATTATCACCATGATATGGGGTTGGGCACTGTTAGCAGGCAATGATGTGATGGCAGACGAGTTTGTCGCCGGCCATGTTATTTTCGGCGTTGGTATGATTGCCGCCTGTGTATCGACGGTGGCAGCGTCATCCGGTCACTTTCTGCTCATTCCCAAAAATGCAGCGGGGAGCAAGAGCGACGGAACACCGGTACAGGCTTATTCTTCATTAATCGGTAACTGCCTCATTGCCGTTCCCGTTTTACTCACCCTGCTCGGTTTCATTTGGTCTATTACGCTGTTACGTAGTGCTGACATAACTCCGCATTATGTCGCGGGTCACGTATTGCTTGGGTTAACCGCAATCTGTGCCTGTCTAATTGGCCTTGTTGCCACAATTGTCCATCAAACACGTAATACGTTTTCAACTAAAGAACACTGGCTGTGGTGTTATTGGGTTATTTTTCTCGGCTCAATCACGGTACTGCAGGGGATATACGTCTTAGTCAGTTCCGATGCAAGCGCCCGACTGGCTCCCGGCATTATTCTTATTTGCCTCGGAATGATCTGTTACAGCATATTCTCAAAAGTCTGGCTACTGGCACTGGTATGGAGACGTACCTGTTCGTTAGCCAACAGAATACCGATGATTCCCGTCTTCACCTGCCTGTTTTGCCTTTTCCTGGCATCGTTTCTTGCGGAAATGGCGCAGACCGACATGGGATATTTTATTCCTTCGCGAGTTCTGGTCGGTTTGGGAGCGGTATGCTTTACGTTGTTCTCAATCGTTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAA", 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"gene_synonym", + "JW3459" + ], + [ + "gene_synonym", + "NP_417949.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37631" + ], + [ + "gene_synonym", + "b3492" + ], + [ + "gene_synonym", + "yhiN" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0011417" + ], + [ + "gene_synonym", + "ECK3481" + ], + [ + "gene_synonym", + "EcoGene:EG12232" + ], + [ + "gene_synonym", + "GI:16131368" + ], + [ + "gene_synonym", + "GeneID:948006" + ], + [ + "gene_synonym", + "JW3463" + ], + [ + "gene_synonym", + "NP_417953.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36837" + ], + [ + "gene_synonym", + "b3496" + ], + [ + "gene_synonym", + "dtpB" + ], + [ + "gene_synonym", + "yhiP" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG12233" + ], + [ + "gene_synonym", + "GI:16131369" + ], + [ + "gene_synonym", + "GeneID:948005" + ], + [ + "gene_synonym", + "JW5672" + ], + [ + "gene_synonym", + "NP_417954.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68567" + ], + [ + "gene_synonym", + "b3497" + ], + [ + "gene_synonym", + "rsmJ" + ], + [ + "gene_synonym", + "yhiQ" + ] + ], + "dna_sequence": 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"parent_gene": "", + "protein_md5": "9d09691ceae35d2290c48298e959323d", + "protein_translation": "MKICLIDETGTGDGALSVLAARWGLEHDEDNLMALVLTPEHLELRKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVKRPDYAPPLANVATPNAVVTKGHRFDIYAGTPV", + "protein_translation_length": 250, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011421" + ], + [ + "gene_synonym", + "ECK3483" + ], + [ + "gene_synonym", + "EcoGene:EG11441" + ], + [ + "gene_synonym", + "GI:16131370" + ], + [ + "gene_synonym", + "GeneID:948016" + ], + [ + "gene_synonym", + "JW3465" + ], + [ + "gene_synonym", + "NP_417955.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27298" + ], + [ + "gene_synonym", + "b3498" + ], + [ + "gene_synonym", + "opdA" + ], + [ + "gene_synonym", + "prlC" + ] + ], + "dna_sequence": 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"MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTITVSATYPGADAQTVEDSVTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDIAQVQVQNKLQLAMPSLPEAVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVASNIKDPLSRTAGVGSVQLFGSEYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQLGGMPQAADQQLNASIIVQTRLQTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYSTVARYNGKPAAGIAIKLAAGANALDTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIEISIQEVFKTLVEAIILVFLVMYLFLQNFRATIIPTIAVPVVILGTFAILSAVGFTINTLTMFGMVLAIGLLVDDAIVVVENVERVIAEDKLPPKEATHKSMGQIQRALVGIAVVLSAVFMPMAFMSGATGEIYRQFSITLISSMLLSVFVAMSLTPALCATILKAAPEGGHKPNALFARFNTLFEKSTQHYTDSTRSLLRCTGRYMVVYLLICAGMAVLFLRTPTSFLPEEDQGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKEKDNVQSVFTVGGFGFSGQGQNNGLAFISLKPWSERVGEENSVTAIIQRAMIALSSINKAVVFPFNLPAVAELGTASGFDMELLDNGNLGHEKLTQARNELLSLAAQSPNQVTGVRPNGLEDTPMFKVNVNAAKAEAMGVALSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRMLPDNINQWYVRNASGTMAPLSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMKFMADLVAKLPAGVGYSWTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVMLVVPLGVVGALLATDLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPIEAIIEAARMRLRPILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFVPVFFVVVEHLFARFKKA", + "protein_translation_length": 1037, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011482" + ], + [ + "gene_synonym", + "ECK3499" + ], + [ + "gene_synonym", + "EcoGene:EG12242" + ], + [ + "gene_synonym", + "GI:16131387" + ], + [ + "gene_synonym", + "GeneID:948029" + ], + [ + "gene_synonym", + "JW3483" + ], + [ + "gene_synonym", + "NP_417972.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P63201" + ], + [ + "gene_synonym", + "b3515" + ], + [ + "gene_synonym", + "gadW" + ], + [ + "gene_synonym", + "yhiW" + ] + ], + "dna_sequence": 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"parent_gene": "", + "protein_md5": "2d0584b36a0ac81361ae76d80a82fcf4", + "protein_translation": "MTHVCSVILIRRSFDIYHEQQKISLHNESILLLEKNLADDFAFCSPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGTFS", + "protein_translation_length": 242, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011487" + ], + [ + "gene_synonym", + "ECK3501" + ], + [ + "gene_synonym", + "EcoGene:EG12243" + ], + [ + "gene_synonym", + "GI:16131388" + ], + [ + "gene_synonym", + "GeneID:948028" + ], + [ + "gene_synonym", + "JW3484" + ], + [ + "gene_synonym", + "NP_417973.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37639" + ], + [ + "gene_synonym", + "b3516" + ], + [ + "gene_synonym", + "gadX" + ], + [ + "gene_synonym", + "yhiX" + ] + ], + "dna_sequence": "ATGCAATCACTACATGGGAATTGTCTAATTGCGTATGCAAGACATAAATATATTCTCACCATGGTTAATGGTGAATATCGCTATTTTAATGGCGGTGACCTGGTTTTTGCGGATGCAAGCCAAATTCGAGTAGATAAGTGTGTTGAAAATTTTGTATTCGTGTCAAGGGACACGCTTTCATTATTTCTCCCGATGCTCAAGGAGGAGGCATTAAATCTTCATGCACATAAAAAAGTTTCTTCATTACTCGTTCATCACTGTAGTAGAGATATTCCTGTTTTTCAGGAAGTTGCGCAACTATCGCAGAATAAGAATCTTCGCTATGCAGAAATGCTACGTAAAAGAGCATTAATCTTTGCGTTGTTATCTGTTTTTCTTGAGGATGAGCACTTTATACCGCTGCTTCTGAACGTTTTACAACCGAACATGCGAACACGAGTTTGTACGGTTATCAATAATAATATCGCCCATGAGTGGACACTAGCCCGAATCGCCAGCGAGCTGTTGATGAGTCCAAGTCTGTTAAAGAAAAAATTGCGCGAAGAAGAGACATCATATTCACAGTTGCTTACTGAGTGTAGAATGCAACGTGCTTTGCAACTTATTGTTATACATGGTTTTTCAATTAAGCGAGTTGCAGTATCCTGTGGATATCACAGCGTGTCGTATTTCATTTACGTCTTTCGAAATTATTATGGGATGACGCCCACAGAGTATCAGGAGCGATCGGCGCAGAGATTGTCGAACCGTGACTCGGCGGCAAGTATTGTTGCGCAAGGGAATTTTTACGGCACTGACCGTTCTGCGGAAGGAATAAGATTATAG", + "dna_sequence_length": 825, + "functions": [ + "acid resistance regulon transcriptional activator", + "autoactivator" + ], + "id": "CDS_3453", + "location": [ + [ + "NC_000913", + 3665810, + "-", + 825 + ] + ], + "md5": "17641557eb2755f182f461cef847e618", + "parent_gene": "", + "protein_md5": "231dd8666a5a46d071509482027df3cd", + "protein_translation": "MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVENFVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQLSQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNRDSAASIVAQGNFYGTDRSAEGIRL", + "protein_translation_length": 274, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011490" + ], + [ + "gene_synonym", + "ECK3502" + ], + [ + "gene_synonym", + "EcoGene:EG50009" + ], + [ + "gene_synonym", + "GI:16131389" + ], + [ + "gene_synonym", + "GeneID:948027" + ], + [ + "gene_synonym", + "JW3485" + ], + [ + "gene_synonym", + "NP_417974.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P69908" + ], + [ + "gene_synonym", + "b3517" + ], + [ + "gene_synonym", + "gadA" + ], + [ + "gene_synonym", + "gadS" + ] + ], + "dna_sequence": "ATGGACCAGAAGCTGTTAACGGATTTCCGCTCAGAACTACTCGATTCACGTTTTGGCGCAAAGGCCATTTCTACTATCGCGGAGTCAAAACGATTTCCGCTGCACGAAATGCGCGATGATGTCGCATTTCAGATTATCAATGATGAATTATATCTTGATGGCAACGCTCGTCAGAACCTGGCCACTTTCTGCCAGACCTGGGACGACGAAAACGTCCATAAATTGATGGATTTGTCGATCAATAAAAACTGGATCGACAAAGAAGAATATCCGCAATCCGCAGCCATCGACCTGCGTTGCGTAAATATGGTTGCCGATCTGTGGCATGCGCCTGCGCCGAAAAATGGTCAGGCCGTTGGCACCAACACCATTGGTTCTTCCGAGGCCTGTATGCTCGGCGGGATGGCGATGAAATGGCGTTGGCGCAAGCGTATGGAAGCTGCAGGCAAACCAACGGATAAACCAAACCTGGTGTGCGGTCCGGTACAAATCTGCTGGCATAAATTCGCCCGCTACTGGGATGTGGAGCTGCGTGAGATCCCTATGCGCCCCGGTCAGTTGTTTATGGACCCGAAACGCATGATTGAAGCCTGTGACGAAAACACCATCGGCGTGGTGCCGACTTTCGGCGTGACCTACACCGGTAACTATGAGTTCCCACAACCGCTGCACGATGCGCTGGATAAATTCCAGGCCGACACCGGTATCGACATCGACATGCACATCGACGCTGCCAGCGGTGGCTTCCTGGCACCGTTCGTCGCCCCGGATATCGTCTGGGACTTCCGCCTGCCGCGTGTGAAATCGATCAGTGCTTCAGGCCATAAATTCGGTCTGGCTCCGCTGGGCTGCGGCTGGGTTATCTGGCGTGACGAAGAAGCGCTGCCGCAGGAACTGGTGTTCAACGTTGACTACCTGGGTGGTCAAATTGGTACTTTTGCCATCAACTTCTCCCGCCCGGCGGGTCAGGTAATTGCACAGTACTATGAATTCCTGCGCCTCGGTCGTGAAGGCTATACCAAAGTACAGAACGCCTCTTACCAGGTTGCCGCTTATCTGGCGGATGAAATCGCCAAACTGGGGCCGTATGAGTTCATCTGTACGGGTCGCCCGGACGAAGGCATCCCGGCGGTTTGCTTCAAACTGAAAGATGGTGAAGATCCGGGATACACCCTGTACGACCTCTCTGAACGTCTGCGTCTGCGCGGCTGGCAGGTTCCGGCCTTCACTCTCGGCGGTGAAGCCACCGACATCGTGGTGATGCGCATTATGTGTCGTCGCGGCTTCGAAATGGACTTTGCTGAACTGTTGCTGGAAGACTACAAAGCCTCCCTGAAATATCTCAGCGATCACCCGAAACTGCAGGGTATTGCCCAGCAGAACAGCTTTAAACACACCTGA", + "dna_sequence_length": 1401, + "functions": [ + "glutamate decarboxylase A, PLP-dependent" + ], + "id": "CDS_3454", + "location": [ + [ + "NC_000913", + 3667580, + "-", + 1401 + ] + ], + "md5": "7bf65bf9be53f1737044cc9194bf7831", + "parent_gene": "", + "protein_md5": "2b4f5dc375d165b36bcd059ce2986a5b", + "protein_translation": "MDQKLLTDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHPKLQGIAQQNSFKHT", + "protein_translation_length": 466, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011493" + ], + [ + "gene_synonym", + "ECK3503" + ], + [ + "gene_synonym", + "EcoGene:EG12244" + ], + [ + "gene_synonym", + "GI:16131390" + ], + [ + "gene_synonym", + "GeneID:948038" + ], + [ + "gene_synonym", + "JW3486" + ], + [ + "gene_synonym", + "NP_417975.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37197" + ], + [ + "gene_synonym", + "b3518" + ], + [ + "gene_synonym", + "yhjA" + ] + ], + "dna_sequence": "ATGAAAATGGTCTCACGTATTACCGCGATCGGCCTGGCTGGCGTCGCGATTTGCTATTTAGGGTTATCTGGTTATGTGTGGTACCACGATAATAAACGCAGTAAACAGGCCGATGTTCAGGCATCTGCTGTCAGTGAAAATAATAAGGTTTTAGGCTTTCTCCGCGAAAAAGGATGCGACTATTGCCACACGCCTTCGGCAGAATTACCCGCCTATTATTATATTCCTGGCGCGAAACAGTTGATGGATTACGACATTAAGCTTGGATATAAATCTTTTAACCTTGAGGCCGTGCGTGCGGCACTGCTGGCTGATAAACCCGTTTCGCAAAGCGATTTGAATAAGATTGAATGGGTGATGCAGTATGAAACTATGCCACCAACGCGTTATACCGCGCTACACTGGGCGGGTAAGGTGAGTGATGAAGAGCGGGCGGAAATACTGGCCTGGATTGCAAAACAGCGCGCGGAATATTACGCCAGCAATGATACTGCTCCGGAACATCGCAATGAACCGGTGCAGCCCATCCCGCAAAAACTGCCTACCGATGCGCAAAAAGTGGCGTTGGGTTTTGCGCTGTATCACGATCCCCGTTTATCGGCTGATAGCACCATTTCATGCGCTCATTGCCATGCGTTGAATGCGGGGGGCGTCGATGGCAGAAAAACATCGATTGGTGTTGGTGGCGCAGTTGGGCCGATTAACGCGCCGACGGTATTTAACTCAGTATTTAACGTTGAGCAGTTCTGGGATGGTCGTGCGGCAACATTGCAGGATCAGGCTGGTGGACCGCCGTTGAACCCGATTGAAATGGCGTCGAAATCCTGGGACGAAATTATTGCTAAGCTGGAAAAAGATCCGCAGCTTAAAACGCAGTTCCTCGAAGTCTATCCGCAAGGTTTCAGTGGCGAAAATATTACTGATGCCATTGCTGAATTTGAGAAAACATTAATTACGCCGGATTCCCCATTTGATAAATGGTTGCGCGGAGATGAAAATGCGCTGACGGCGCAACAGAAAAAAGGCTATCAATTATTTAAAGATAATAAATGTGCAACTTGTCATGGTGGTATTATTCTCGGCGGACGTTCCTTTGAACCGTTGGGGCTGAAAAAAGACTTTAACTTTGGGGAAATTACGGCGGCGGATATTGGTCGTATGAATGTGACTAAAGAAGAGCGTGATAAATTGCGTCAGAAAGTACCCGGTTTACGTAACGTTGCTTTAACGGCACCGTACTTCCATCGCGGTGACGTGCCGACGCTGGACGGGGCGGTGAAACTGATGCTGCGCTATCAGGTAGGCAAAGAGCTGCCGCAGGAGGATGTGGATGATATCGTAGCTTTCCTGCACAGTCTGAACGGGGTGTACACGCCGTATATGCAGGATAAACAATAA", + "dna_sequence_length": 1398, + "functions": [ + "putative cytochrome C peroxidase" + ], + "id": "CDS_3455", + "location": [ + [ + "NC_000913", + 3669188, + "-", + 1398 + ] + ], + "md5": "fd659a9947c5c2107d20b6353fae23f9", + "parent_gene": "", + "protein_md5": "95804d582c3fa91c2361e84073f42252", + "protein_translation": "MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAVSENNKVLGFLREKGCDYCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAALLADKPVSQSDLNKIEWVMQYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYASNDTAPEHRNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGVDGRKTSIGVGGAVGPINAPTVFNSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSWDEIIAKLEKDPQLKTQFLEVYPQGFSGENITDAIAEFEKTLITPDSPFDKWLRGDENALTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKEERDKLRQKVPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFLHSLNGVYTPYMQDKQ", + "protein_translation_length": 465, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011497" + ], + [ + "gene_synonym", + "ECK3504" + ], + [ + "gene_synonym", + "EcoGene:EG12245" + ], + [ + "gene_synonym", + "GI:16131391" + ], + [ + "gene_synonym", + "GeneID:948037" + ], + [ + "gene_synonym", + "JW3487" + ], + [ + "gene_synonym", + "NP_417976.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P62601" + ], + [ + "gene_synonym", + "b3519" + ], + [ + "gene_synonym", + "treF" + ] + ], + "dna_sequence": 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regulator" + ], + "id": "CDS_3458", + "location": [ + [ + "NC_000913", + 3672414, + "+", + 900 + ] + ], + "md5": "96717ecb53670c877b71a7cd0aacb3f1", + "parent_gene": "", + "protein_md5": "665b1496a8dda2ff4cab136ee69e47cd", + "protein_translation": "MDKIHAMQLFIKVAELESFSRAADFFALPKGSVSRQIQALEHQLGTQLLQRTTRRVKLTPEGMTYYQRAKDVLSNLSELDGLFQQDATSISGKLRIDIPPGIAKSLLLPRLSEFLYLHPGIELELSSHDRPVDILHDGFDCVIRTGALPEDGVIARPLGKLTMVNCASPHYLTRFGYPQSPDDLTSHAIVRYTPHLGVHPLGFEVASVNGVQWFKSGGMLTVNSSENYLTAGLAGLGIIQIPRIAVREALRAGRLIEVLPGYRAEPLSLSLVYPQRRELSRRVNLFMQWLAGVMKEYLD", + "protein_translation_length": 299, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011505" + ], + [ + "gene_synonym", + "ECK3507" + ], + [ + "gene_synonym", + "EcoGene:EG12248" + ], + [ + "gene_synonym", + "GI:16131394" + ], + [ + "gene_synonym", + "GeneID:948033" + ], + [ + "gene_synonym", + "JW3490" + ], + [ + "gene_synonym", + "NP_417979.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37642" + ], + [ + "gene_synonym", + "b3522" + ], + [ + "gene_synonym", + "yhjD" + ] + ], + "dna_sequence": 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+ "protein_translation_length": 1157, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011541" + ], + [ + "gene_synonym", + "ECK3516" + ], + [ + "gene_synonym", + "EcoGene:EG12258" + ], + [ + "gene_synonym", + "GI:16131403" + ], + [ + "gene_synonym", + "GeneID:948046" + ], + [ + "gene_synonym", + "JW3499" + ], + [ + "gene_synonym", + "NP_417988.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37651" + ], + [ + "gene_synonym", + "b3531" + ], + [ + "gene_synonym", + "bcsC" + ], + [ + "gene_synonym", + "bcsZ" + ], + [ + "gene_synonym", + "yhjM" + ] + ], + "dna_sequence": "ATGAATGTGTTGCGTAGTGGAATCGTGACGATGCTGCTGCTGGCTGCCTTTAGTGTTCAGGCAGCCTGTACCTGGCCTGCCTGGGAGCAGTTTAAAAAGGATTACATCAGTCAGGAAGGGCGCGTCATCGACCCCAGCGACGCGCGCAAAATCACCACCTCCGAAGGGCAAAGTTACGGCATGTTCTCTGCCCTGGCGGCTAACGACCGTGCAGCTTTCGATAATATTCTCGACTGGACGCAGAACAATCTCGCTCAGGGTTCTTTAAAAGAACGTTTGCCCGCCTGGCTGTGGGGCAAGAAAGAGAACAGTAAGTGGGAAGTGCTGGACAGCAATTCGGCCTCCGATGGTGATGTCTGGATGGCCTGGTCGTTGCTGGAGGCGGGGCGTTTGTGGAAAGAGCAGCGTTATACCGACATCGGCAGCGCGTTGCTAAAACGTATCGCGCGGGAGGAAGTGGTGACGGTGCCTGGGCTGGGTTCCATGTTGTTACCGGGCAAAGTGGGTTTTGCTGAGGATAACAGCTGGCGTTTTAACCCCAGCTACCTGCCGCCGACGCTGGCGCAGTATTTCACCCGCTTTGGCGCGCCGTGGACCACGCTGCGCGAAACCAATCAACGTTTATTGCTGGAAACCGCCCCGAAAGGTTTTTCGCCAGACTGGGTGCGCTATGAGAAAGACAAAGGCTGGCAGCTAAAAGCCGAAAAAACATTGATCAGCAGCTACGACGCTATCCGCGTTTACATGTGGGTAGGCATGATGCCTGACAGCGATCCGCAAAAAGCGCGGATGCTCAACCGGTTTAAACCGATGGCGACATTCACTGAGAAAAACGGTTATCCGCCGGAAAAAGTGGATGTGGCTACGGGGAAAGCGCAGGGTAAAGGACCAGTCGGTTTTTCTGCCGCCATGCTGCCCTTTTTACAAAACCGCGATGCGCAGGCCGTTCAGCGCCAGCGCGTGGCCGATAACTTTCCCGGCAGCGATGCCTATTACAACTATGTGCTGACCCTGTTTGGACAAGGCTGGGATCAACACCGTTTCCGCTTCTCGACAAAAGGTGAGTTATTACCTGACTGGGGCCAGGAATGCGCAAATTCACACTAA", 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"gene_synonym", + "JW3500" + ], + [ + "gene_synonym", + "NP_417989.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37652" + ], + [ + "gene_synonym", + "b3532" + ], + [ + "gene_synonym", + "bcsB" + ], + [ + "gene_synonym", + "yhjN" + ] + ], + "dna_sequence": 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+ "dna_sequence_length": 2340, + "functions": [ + "regulator of cellulose synthase, cyclic di-GMP binding" + ], + "id": "CDS_3469", + "location": [ + [ + "NC_000913", + 3692607, + "-", + 2340 + ] + ], + "md5": "1b75c0623039eefd1160a82e1de315b8", + "parent_gene": "", + "protein_md5": "f2a31ba4537d45216285d2c08005814a", + "protein_translation": "MKRKLFWICAVAMGMSAFPSFMTQATPATQPLINAEPAVAAQTEQNPQVGQVMPGVQGADAPVVAQNGPSRDVKLTFAQIAPPPGSMVLRGINPNGSIEFGMRSDEVVTKAMLNLEYTPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQMPINPLFISDFNRVRLEFVGHYQDVCEKPASTTLWLDVGRSSGLDLTYQTLNVKNDLSHFPVPFFDPSDNRTNTLPMVFAGAPDVGLQQASAIVASWFGSRSGWRGQNFPVLYNQLPDRNAIVFATNDKRPDFLRDHPAVKAPVIEMINHPQNPYVKLLVVFGRDDKDLLQAAKGIAQGNILFRGESVVVNEVKPLLPRKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAAINVSLNLPPDLYLMRSTGIDMDINYRYTMPPVKDSSRMDISLNNQFLQSFNLSSKQEANRLLLRIPVLQGLLDGKTDVSIPALKLGATNQLRFDFEYMNPMPGGSVDNCITFQPVQNHVVIGDDSTIDFSKYYHFIPMPDLRAFANAGFPFSRMADLSQTITVMPKAPNEAQMETLLNTVGFIGAQTGFPAINLTVTDDGSTIQGKDADIMIIGGIPDKLKDDKQIDLLVQATESWVKTPMRQTPFPGIVPDESDRAAETRSTLTSSGAMAAVIGFQSPYNDQRSVIALLADSPRGYEMLNDAVNDSGKRATMFGSVAVIRESGINSLRVGDVYYVGHLPWFERVWYALANHPILLAVLAAISVILLAWVLWRLLRIISRRRLNPDNE", + "protein_translation_length": 779, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011547" + ], + [ + "gene_synonym", + "ECK3518" + ], + [ + "gene_synonym", + "EcoGene:EG12260" + ], + [ + "gene_synonym", + "GI:90111609" + ], + [ + "gene_synonym", + "GeneID:948053" + ], + [ + "gene_synonym", + "JW5665" + ], + [ + "gene_synonym", + "NP_417990.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37653" + ], + [ + "gene_synonym", + "b3533" + ], + [ + "gene_synonym", + "bcsA" + ], + [ + "gene_synonym", + "yhjO" + ], + [ + "gene_synonym", + "yhjP" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:948056" + ], + [ + "gene_synonym", + "JW3509" + ], + [ + "gene_synonym", + "NP_417997.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37313" + ], + [ + "gene_synonym", + "b3540" + ], + [ + "gene_synonym", + "dppF" + ] + ], + "dna_sequence": 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"dna_sequence_length": 984, + "functions": [ + "dipeptide/heme ABC transporter ATPas" + ], + "id": "CDS_3479", + "location": [ + [ + "NC_000913", + 3703848, + "-", + 984 + ] + ], + "md5": "0e4d2201de5a676abeab048122f7e572", + "parent_gene": "", + "protein_md5": "d03839ac745ddbaf94d5a9a460a0aa79", + "protein_translation": "MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHAIFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLDDAGRPTL", + "protein_translation_length": 327, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011570" + ], + [ + "gene_synonym", + "ECK3529" + ], + [ + "gene_synonym", + "EcoGene:EG12626" + ], + [ + "gene_synonym", + "GI:16131414" + ], + [ + "gene_synonym", + "GeneID:948064" + ], + [ + "gene_synonym", + "JW3511" + ], + [ + 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], + "id": "CDS_3480", + "location": [ + [ + "NC_000913", + 3704761, + "-", + 903 + ] + ], + "md5": "aa72038a7b3a1180d3360771b73d223b", + "parent_gene": "", + "protein_md5": "462381d1f9177a9af316dab6fb71b1f4", + "protein_translation": "MSQVTENKVISAPVPMTPLQEFWHYFKRNKGAVVGLVYVVIVLFIAIFANWIAPYNPAEQFRDALLAPPAWQEGGSMAHLLGTDDVGRDVLSRLMYGARLSLLVGCLVVVLSLIMGVILGLIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPSIGNAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPKLKQ", + "protein_translation_length": 300, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011572" + ], + [ + "gene_synonym", + "ECK3530" + ], + [ + "gene_synonym", + "EcoGene:EG12625" + ], + [ + "gene_synonym", + "GI:16131415" + ], + [ + "gene_synonym", + "GeneID:948063" + ], + [ + "gene_synonym", + "JW3512" + ], + [ + "gene_synonym", + "NP_418000.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AEF8" + ], + [ + "gene_synonym", 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"JW3513" + ], + [ + "gene_synonym", + "NP_418001.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23847" + ], + [ + "gene_synonym", + "alu" + ], + [ + "gene_synonym", + "b3544" + ], + [ + "gene_synonym", + "dpp" + ], + [ + "gene_synonym", + "dppA" + ], + [ + "gene_synonym", + "fpp" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0011586" + ], + [ + "gene_synonym", + "ECK3534" + ], + [ + "gene_synonym", + "EcoGene:EG12268" + ], + [ + "gene_synonym", + "GI:16131418" + ], + [ + "gene_synonym", + "GeneID:948066" + ], + [ + "gene_synonym", + "JW3516" + ], + [ + "gene_synonym", + "NP_418003.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37662" + ], + [ + "gene_synonym", + "b3547" + ], + [ + "gene_synonym", + "oxlT" + ], + [ + "gene_synonym", + "yhjX" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW3534" + ], + [ + "gene_synonym", + "NP_418019.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADJ8" + ], + [ + "gene_synonym", + "b3562" + ], + [ + "gene_synonym", + "yiaA" + ] + ], + "dna_sequence": "ATGGACAACAAAATATCAACCTATTCACCGGCCTTTAGTATTGTGTCATGGATAGCTCTCGTTGGTGGTATCGTTACCTATCTGTTAGGGCTATGGAATGCAGAGATGCAGTTAAATGAAAAAGGATATTATTTTGCCGTACTGGTATTAGGACTGTTTTCTGCGGCGTCTTATCAAAAGACCGTTCGGGACAAGTATGAAGGCATACCGACCACTTCCATTTATTATATGACCTGCCTGACTGTCTTTATTATCTCTGTTGCATTACTGATGGTAGGTCTGTGGAATGCGACATTATTACTCAGCGAAAAAGGTTTTTATGGACTGGCTTTCTTCTTAAGCTTGTTTGGTGCAGTAGCGGTGCAGAAAAATATTCGTGATGCCGGAATAAACCCACCAAAAGAAACACAGGTTACCCAGGAAGAATACAGCGAATAA", + "dna_sequence_length": 438, + "functions": [ + "YiaAB family inner membrane protein, tandem domains" + ], + "id": "CDS_3502", + "location": [ + [ + "NC_000913", + 3727361, + "-", + 438 + ] + ], + "md5": "7328da6b1107d9cd5ebf7780281923dd", + "parent_gene": "", + "protein_md5": "442cacac4b05bd9bbbd47ce5e97f840e", + "protein_translation": "MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE", + "protein_translation_length": 145, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011634" + ], + [ + "gene_synonym", + "ECK3552" + ], + [ + "gene_synonym", + "EcoGene:EG11267" + ], + [ + "gene_synonym", + "GI:90111617" + ], + [ + "gene_synonym", + "GeneID:948152" + ], + [ + "gene_synonym", + "JW5654" + ], + [ + "gene_synonym", + "NP_418020.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11286" + ], + [ + "gene_synonym", + "b3563" + ], + [ + "gene_synonym", + "yiaB" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "GI:16131436" + ], + [ + "gene_synonym", + "GeneID:948141" + ], + [ + "gene_synonym", + "JW3537" + ], + [ + "gene_synonym", + "NP_418022.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00944" + ], + [ + "gene_synonym", + "b3565" + ], + [ + "gene_synonym", + "xylA" + ] + ], + "dna_sequence": "ATGCAAGCCTATTTTGACCAGCTCGATCGCGTTCGTTATGAAGGCTCAAAATCCTCAAACCCGTTAGCATTCCGTCACTACAATCCCGACGAACTGGTGTTGGGTAAGCGTATGGAAGAGCACTTGCGTTTTGCCGCCTGCTACTGGCACACCTTCTGCTGGAACGGGGCGGATATGTTTGGTGTGGGGGCGTTTAATCGTCCGTGGCAGCAGCCTGGTGAGGCACTGGCGTTGGCGAAGCGTAAAGCAGATGTCGCATTTGAGTTTTTCCACAAGTTACATGTGCCATTTTATTGCTTCCACGATGTGGATGTTTCCCCTGAGGGCGCGTCGTTAAAAGAGTACATCAATAATTTTGCGCAAATGGTTGATGTCCTGGCAGGCAAGCAAGAAGAGAGCGGCGTGAAGCTGCTGTGGGGAACGGCCAACTGCTTTACAAACCCTCGCTACGGCGCGGGTGCGGCGACGAACCCAGATCCTGAAGTCTTCAGCTGGGCGGCAACGCAAGTTGTTACAGCGATGGAAGCAACCCATAAATTGGGCGGTGAAAACTATGTCCTGTGGGGCGGTCGTGAAGGTTACGAAACGCTGTTAAATACCGACTTGCGTCAGGAGCGTGAACAACTGGGCCGCTTTATGCAGATGGTGGTTGAGCATAAACATAAAATCGGTTTCCAGGGCACGTTGCTTATCGAACCGAAACCGCAAGAACCGACCAAACATCAATATGATTACGATGCCGCGACGGTCTATGGCTTCCTGAAACAGTTTGGTCTGGAAAAAGAGATTAAACTGAACATTGAAGCTAACCACGCGACGCTGGCAGGTCACTCTTTCCATCATGAAATAGCCACCGCCATTGCGCTTGGCCTGTTCGGTTCTGTCGACGCCAACCGTGGCGATGCGCAACTGGGCTGGGACACCGACCAGTTCCCGAACAGTGTGGAAGAGAATGCGCTGGTGATGTATGAAATTCTCAAAGCAGGCGGTTTCACCACCGGTGGTCTGAACTTCGATGCCAAAGTACGTCGTCAAAGTACTGATAAATATGATCTGTTTTACGGTCATATCGGCGCGATGGATACGATGGCACTGGCGCTGAAAATTGCAGCGCGCATGATTGAAGATGGCGAGCTGGATAAACGCATCGCGCAGCGTTATTCCGGCTGGAATAGCGAATTGGGCCAGCAAATCCTGAAAGGCCAAATGTCACTGGCAGATTTAGCCAAATATGCTCAGGAACATCATTTGTCTCCGGTGCATCAGAGTGGTCGCCAGGAACAACTGGAAAATCTGGTAAACCATTATCTGTTCGACAAATAA", 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"GI:16131437" + ], + [ + "gene_synonym", + "GeneID:948090" + ], + [ + "gene_synonym", + "JW3538" + ], + [ + "gene_synonym", + "NP_418023.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37387" + ], + [ + "gene_synonym", + "b3566" + ], + [ + "gene_synonym", + "xylF" + ], + [ + "gene_synonym", + "xylT" + ] + ], + "dna_sequence": "ATGAAAATAAAGAACATTCTACTCACCCTTTGCACCTCACTCCTGCTTACCAACGTTGCTGCACACGCCAAAGAAGTCAAAATAGGTATGGCGATTGATGATCTCCGTCTTGAACGCTGGCAAAAAGATCGAGATATCTTTGTGAAAAAGGCAGAATCTCTCGGCGCGAAAGTATTTGTACAGTCTGCAAATGGCAATGAAGAAACACAAATGTCGCAGATTGAAAACATGATAAACCGGGGTGTCGATGTTCTTGTCATTATTCCGTATAACGGTCAGGTATTAAGTAACGTTGTAAAAGAAGCCAAACAAGAAGGCATTAAAGTATTAGCTTACGACCGTATGATTAACGATGCGGATATCGATTTTTATATTTCTTTCGATAACGAAAAAGTCGGTGAACTGCAGGCAAAAGCCCTGGTCGATATTGTTCCGCAAGGTAATTACTTCCTGATGGGCGGCTCGCCGGTAGATAACAACGCCAAGCTGTTCCGCGCCGGACAAATGAAAGTGTTAAAACCTTACGTTGATTCCGGAAAAATTAAAGTCGTTGGTGACCAATGGGTTGATGGCTGGTTACCGGAAAACGCATTGAAAATTATGGAAAACGCGCTAACCGCCAATAATAACAAAATTGATGCTGTAGTTGCCTCAAACGATGCCACCGCAGGTGGGGCAATTCAGGCATTAAGCGCGCAAGGTTTATCAGGGAAAGTAGCAATCTCCGGCCAGGATGCGGATCTCGCAGGTATTAAACGTATTGCTGCCGGTACGCAAACTATGACGGTGTATAAACCTATTACGTTGTTGGCAAATACTGCCGCAGAAATTGCCGTTGAGTTGGGCAATGGTCAGGAACCAAAAGCAGATACCACACTGAATAATGGCCTGAAAGATGTCCCCTCCCGCCTCCTGACACCGATCGATGTGAATAAAAACAACATCAAAGATACGGTAATTAAAGACGGATTCCACAAAGAGAGCGAGCTGTAA", + "dna_sequence_length": 993, + "functions": [ + "D-xylose transporter subunit" + ], + "id": "CDS_3506", + "location": [ + [ + "NC_000913", + 3731131, + "+", + 993 + ] + ], + "md5": "18ba9bfeeee1c6131ebffb1277e7103d", + "parent_gene": "", + "protein_md5": "9e37d82f87e534925975eadfe2674218", + "protein_translation": "MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL", + "protein_translation_length": 330, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011648" + ], + [ + "gene_synonym", + "ECK3556" + ], + [ + "gene_synonym", + "EcoGene:EG12275" + ], + [ + "gene_synonym", + "GI:16131438" + ], + [ + "gene_synonym", + "GeneID:948127" + ], + [ + "gene_synonym", + "JW3539" + ], + [ + "gene_synonym", + "NP_418024.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37388" + ], + [ + "gene_synonym", + "b3567" + ], + [ + "gene_synonym", + "xylG" + ] + ], + "dna_sequence": "ATGCCTTATCTACTTGAAATGAAGAACATTACCAAAACCTTCGGCAGTGTGAAGGCGATTGATAACGTCTGCTTGCGGTTGAATGCTGGCGAAATCGTCTCACTTTGTGGGGAAAATGGGTCTGGTAAATCAACGCTGATGAAAGTGCTGTGTGGTATTTATCCCCATGGCTCCTACGAAGGCGAAATTATTTTTGCGGGAGAAGAGATTCAGGCGAGTCACATCCGCGATACCGAACGCAAAGGTATCGCCATCATTCATCAGGAATTGGCCCTGGTGAAAGAATTGACCGTGCTGGAAAATATCTTCCTGGGTAACGAAATAACCCACAATGGCATTATGGATTATGACCTGATGACGCTACGCTGTCAGAAGCTGCTCGCACAGGTCAGTTTATCCATTTCACCTGATACCCGCGTTGGCGATTTAGGGCTTGGGCAACAACAACTGGTTGAAATTGCCAAGGCACTTAATAAACAGGTGCGCTTGTTAATTCTCGATGAACCGACAGCCTCATTAACTGAGCAGGAAACGTCGATTTTACTGGATATTATTCGCGATCTACAACAGCACGGTATCGCCTGTATTTATATTTCGCACAAACTCAACGAAGTCAAAGCGATTTCCGATACGATTTGCGTTATTCGCGACGGACAGCACATTGGTACGCGTGATGCTGCCGGAATGAGTGAAGACGATATTATCACCATGATGGTCGGGCGAGAGTTAACCGCGCTTTACCCTAATGAACCACATACCACCGGAGATGAAATATTACGTATTGAACATCTGACGGCATGGCATCCGGTTAATCGTCATATTAAACGAGTTAATGATGTCTCGTTTTCCCTGAAACGTGGCGAAATATTGGGTATTGCCGGACTCGTTGGTGCCGGACGTACCGAGACCATTCAGTGCCTGTTTGGTGTGTGGCCCGGACAATGGGAAGGAAAAATTTATATTGATGGCAAACAGGTAGATATTCGTAACTGTCAGCAAGCCATCGCCCAGGGGATTGCGATGGTCCCCGAAGACAGAAAGCGCGACGGCATCGTTCCGGTAATGGCGGTTGGTAAAAATATTACCCTCGCCGCACTCAATAAATTTACCGGTGGCATTAGCCAGCTTGATGACGCGGCAGAGCAAAAATGTATTCTGGAATCAATCCAGCAACTCAAAGTTAAAACGTCGTCCCCCGACCTTGCTATTGGACGTTTGAGCGGCGGCAATCAGCAAAAAGCGATCCTCGCTCGCTGTCTGTTACTTAACCCGCGCATTCTCATTCTTGATGAACCCACCAGGGGTATCGATATTGGCGCGAAATACGAGATCTACAAATTAATTAACCAACTCGTCCAGCAGGGTATTGCCGTTATTGTCATCTCTTCCGAATTACCTGAAGTGCTCGGCCTTAGCGATCGTGTACTGGTGATGCATGAAGGGAAACTAAAAGCCAACCTGATAAATCATAACCTGACTCAGGAGCAGGTGATGGAAGCCGCATTGAGGAGCGAACATCATGTCGAAAAGCAATCCGTCTGA", + "dna_sequence_length": 1542, + "functions": [ + "D-xylose ABC transporter dual domain ATPase" + ], + "id": "CDS_3507", + "location": [ + [ + "NC_000913", + 3732201, + "+", + 1542 + ] + ], + "md5": "bd7d578ec7d3196fab88ab95cb0eec01", + "parent_gene": "", + "protein_md5": "6992519dd8bb5850146e8a3e96a2aba8", + "protein_translation": "MPYLLEMKNITKTFGSVKAIDNVCLRLNAGEIVSLCGENGSGKSTLMKVLCGIYPHGSYEGEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENIFLGNEITHNGIMDYDLMTLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQVRLLILDEPTASLTEQETSILLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDGQHIGTRDAAGMSEDDIITMMVGRELTALYPNEPHTTGDEILRIEHLTAWHPVNRHIKRVNDVSFSLKRGEILGIAGLVGAGRTETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQAIAQGIAMVPEDRKRDGIVPVMAVGKNITLAALNKFTGGISQLDDAAEQKCILESIQQLKVKTSSPDLAIGRLSGGNQQKAILARCLLLNPRILILDEPTRGIDIGAKYEIYKLINQLVQQGIAVIVISSELPEVLGLSDRVLVMHEGKLKANLINHNLTQEQVMEAALRSEHHVEKQSV", + "protein_translation_length": 513, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011650" + ], + [ + "gene_synonym", + "ECK3557" + ], + [ + "gene_synonym", + "EcoGene:EG12276" + ], + [ + "gene_synonym", + "GI:16131439" + ], + [ + "gene_synonym", + "GeneID:948083" + ], + [ + "gene_synonym", + "JW3540" + ], + [ + "gene_synonym", + "NP_418025.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGI4" + ], + [ + "gene_synonym", + "b3568" + ], + [ + "gene_synonym", + "xylH" + ] + ], + "dna_sequence": "ATGTCGAAAAGCAATCCGTCTGAAGTGAAATTGGCCGTACCGACATCCGGTGGCTTCTCCGGGCTGAAATCACTGAATTTGCAGGTCTTCGTGATGATTGCAGCTATCATCGCAATCATGCTGTTCTTTACCTGGACCACCGATGGTGCCTACTTAAGCGCCCGTAACGTCTCCAACCTGTTACGCCAGACCGCGATTACCGGCATCCTCGCGGTAGGAATGGTGTTCGTCATAATTTCTGCTGAAATCGACCTTTCCGTCGGCTCAATGATGGGGCTGTTAGGTGGCGTCGCGGCGATTTGTGACGTCTGGTTAGGCTGGCCTTTGCCACTTACCATCATTGTGACGCTGGTTCTGGGACTGCTTCTCGGTGCCTGGAACGGATGGTGGGTCGCGTACCGTAAAGTCCCTTCATTTATTGTCACCCTCGCGGGCATGTTGGCATTTCGCGGCATACTCATTGGCATCACCAACGGCACGACTGTATCCCCCACCAGCGCCGCGATGTCACAAATTGGGCAAAGCTATCTCCCCGCCAGTACCGGCTTCATCATTGGCGCGCTTGGCTTAATGGCTTTTGTTGGTTGGCAATGGCGCGGAAGAATGCGCCGTCAGGCTTTGGGTTTACAGTCTCCGGCCTCTACCGCAGTAGTCGGTCGCCAGGCTTTAACCGCTATCATCGTATTAGGCGCAATCTGGCTGTTGAATGATTACCGTGGCGTTCCCACTCCTGTTCTGCTGCTGACGTTGCTGTTACTCGGCGGAATGTTTATGGCAACGCGGACGGCATTTGGACGACGCATTTATGCCATCGGCGGCAATCTGGAAGCAGCACGTCTCTCCGGGATTAACGTTGAACGCACCAAACTTGCCGTGTTCGCGATTAACGGATTAATGGTAGCCATCGCCGGATTAATCCTTAGTTCTCGACTTGGCGCTGGTTCACCTTCTGCGGGAAATATCGCCGAACTGGACGCAATTGCAGCATGCGTGATTGGCGGCACCAGCCTGGCTGGCGGTGTGGGAAGCGTTGCCGGAGCAGTAATGGGGGCATTTATCATGGCTTCACTGGATAACGGCATGAGTATGATGGATGTACCGACCTTCTGGCAGTATATCGTTAAAGGTGCGATTCTGTTGCTGGCAGTATGGATGGACTCCGCAACCAAACGCCGTTCTTGA", 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S-transferase homolog" + ], + "id": "CDS_3534", + "location": [ + [ + "NC_000913", + 3761955, + "-", + 609 + ] + ], + "md5": "92ac3e61822c340a23fec01503510701", + "parent_gene": "", + "protein_md5": "bdf43d94844e8e1113c69c49f67c0e25", + "protein_translation": "MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMDAGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIACAVGYLNFRRVAPGWCVDRPHLVKLVENLFSRESFARTEPPKA", + "protein_translation_length": 202, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011742" + ], + [ + "gene_synonym", + "ECK3582" + ], + [ + "gene_synonym", + "EcoGene:EG10846" + ], + [ + "gene_synonym", + "GI:16131464" + ], + [ + "gene_synonym", + "GeneID:948120" + ], + [ + "gene_synonym", + "JW3566" + ], + [ + "gene_synonym", + "NP_418050.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16916" + ], + [ + "gene_synonym", + "b3593" + ], + [ + "gene_synonym", + "rhsA" + ] + ], + "dna_sequence": 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protein" + ], + "id": "CDS_3536", + "location": [ + [ + "NC_000913", + 3766337, + "+", + 843 + ] + ], + "md5": "c6e61b277393c7908e3c9b126e0d208e", + "parent_gene": "", + "protein_md5": "d18afbf78dee68b5e81f6540cfe98193", + "protein_translation": "MSNTYQKRKASKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGELGDKTLLPVLDTMLYKFDDNEIITSAIDKLKRS", + "protein_translation_length": 280, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011746" + ], + [ + "gene_synonym", + "ECK3584" + ], + [ + "gene_synonym", + "EcoGene:EG11766" + ], + [ + "gene_synonym", + "GeneID:948112" + ], + [ + "gene_synonym", + "JW5647" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32109" + ], + [ + "gene_synonym", + "b3595" + ], + [ + "gene_synonym", + "rhsJ" + ], + [ + "gene_synonym", + "yibJ" + ] + ], + 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"id": "CDS_3537", + "location": [ + [ + "NC_000913", + 3767221, + "+", + 945 + ] + ], + "md5": "205b98c071c2317744aba7fbebe7887a", + "parent_gene": "", + "protein_md5": "e8b865487f9e172870c79a95e7b4dce5", + "protein_translation": "VQMLDRLESEILADRVSEESRRWLASCGLTVEQMKNQMDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWGNLLSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLLGRYITQDPIGLKGGWNFYQYPLNPVINVDPQGLVDINLYPESDLIHSVADEINIPGVFTIGGHGTPTSIESATRSIMTAKDLAYLIKFDGNYKDGMTVWLFSCNTGKGQNSFAS", + "protein_translation_length": 233, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011750" + ], + [ + "gene_synonym", + "ECK3585" + ], + [ + "gene_synonym", + "EcoGene:EG11763" + ], + [ + "gene_synonym", + "GI:16131467" + ], + [ + "gene_synonym", + "GeneID:948111" + ], + [ + "gene_synonym", + "JW3570" + ], + [ + "gene_synonym", + "NP_418053.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32106" + ], + [ + "gene_synonym", + "b3596" + ], + [ + "gene_synonym", + "yibG" + ] + ], + "dna_sequence": "ATGAAAGCATGCTTGTTACTATTTTTTTATTTCTCTTTTATTTGTCAATTGCATGGTGCTGATGTGAAAATAAAACAAAACGAAAGTATGATGGGGTCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGTTGATGAAACTGAAGTATAAATCACAACATGGTGATTCAGAGGCATCATTTCGACTATATCAATATTACTGCTTTACTAAAAATAACATTTACAAACAATTGCGATTCTTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATGGGGTCTTTTTATCAGATACAAATCCAACATTATCAGAATATTATAATTTGAATAGAGCTATTTATTGGATGGAATTCGCTGTAAATAACGGTAATATTGATGCAAAGAGCAAACTTCAAGAGCTCAAAAAGCTAAAGCGAATGGATAGAAGGAAGAATAAGGAGAATCCGTAA", + "dna_sequence_length": 462, + "functions": [ + "TPR-like repeat protein" + ], + "id": "CDS_3538", + "location": [ + [ + "NC_000913", + 3768177, + "+", + 462 + ] + ], + "md5": "35dc9d1812b29c35ee8584dc436b5778", + "parent_gene": "", + "protein_md5": "30109b9477ccfa4741d9b7bd0fac24bd", + "protein_translation": "MKACLLLFFYFSFICQLHGADVKIKQNESMMGSTAMTYDLSEEKLMKLKYKSQHGDSEASFRLYQYYCFTKNNIYKQLRFLERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWMEFAVNNGNIDAKSKLQELKKLKRMDRRKNKENP", + "protein_translation_length": 153, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4440" + ], + [ + "gene_synonym", + "EcoGene:EG14348" + ], + [ + "gene_synonym", + "GeneID:5625576" + ], + [ + "gene_synonym", + "b4650" + ], + [ + "gene_synonym", + "yibS" + ] + ], + "dna_sequence": "AAGCAATAGTTCATCAGACTGCCGCAGCAGTAGTATGATGATGAATCAGGGCTGTACTATAACTATTATCGGTAACATTAACCGCAGCAGGGGCGGTATAACACTCAGGCTCCGATTGGGCTGGAAGGTAGGTGGAATTTTTATCAGTATCCGTTGAACCCGATTTCTGGAATCGATCCCCTTGGGATTAGCCACCTGTTTATACAGCATAACTTTAGGTATGCTTTCGTGTGTTTCAGATATACCATGTGA", + "dna_sequence_length": 252, + "id": "CDS_3539", + "location": [ + [ + "NC_000913", + 3768639, + "+", + 252 + ] + ], + "md5": "2cb15ea58b376dd04db37c3648c06771", + "parent_gene": "", + "protein_md5": "e7d06e530ab8792d58c0ebef4e0b36a4", + "protein_translation": "KQ", + "protein_translation_length": 2, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4450" + ], + [ + "gene_synonym", + "EcoGene:EG14439" + ], + [ + "gene_synonym", + "GeneID:5625577" + ], + [ + "gene_synonym", + "b4651" + ], + [ + "gene_synonym", + "yibW" + ] + ], + "dna_sequence": "GATAATTTTTATGATGTGCTTAGTATTCCAGTCGCTTCTGGTAATAATATGCAATGTAAAAATAATCCCCGTTGTACACATTTAATAAATAGATGGCCAATACCTCAAGGCCTATGGAGTTGGAATGTTAATGACCCGGGAGCAAGCAATAGAAAACCTGACGGCATACGATTAGTACCGTCAGTTAATACAGGAACTTATAATCGCAATGGATTTTCAATACATAGTTGTTTAAACGCTTTTGGTCCGTCTTTAGGACCTCGATTCTGTTCCGAGGGTTGTATAACTGGTTTATCTAATGACATGCAAAAATTAAATGAGTTAATATTTTCAGAGCCAGATAGCACATTAACAGTTACGGACTAA", + "dna_sequence_length": 366, + "id": "CDS_3540", + "location": [ + [ + "NC_000913", + 3768892, + "+", + 84 + ], + [ + "NC_000913", + 3768975, + "+", + 282 + ] + ], + "md5": "b30524cea59e1f9a3a393571ea71c6de", + "parent_gene": "", + "protein_md5": "5194423c7420509391cd7c8759e7eca2", + "protein_translation": "DNFYDVLSIPVASGNNMQCKNNPRCTHLINRWPIPQGLWSWNVNDPGASNRKPDGIRLVPSVNTGTYNRNGFSIHSCLNAFGPSLGPRFCSEGCITGLSNDMQKLNELIFSEPDSTLTVTD", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4424" + ], + [ + "gene_synonym", + "EcoGene:EG14438" + ], + [ + "gene_synonym", + "GeneID:5061524" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:A5A625" + ], + [ + "gene_synonym", + "b4615" + ], + [ + "gene_synonym", + "yibV" + ] + ], + "dna_sequence": "TTGGCAGACAAAGCAATATTATGGGCACTAATATCAGCCAGTACTAAAGAGGGACGAAAAGCGTGTTCACTAAGCTATTTTGCCTGTAAGGCCGCAGAGGCTGAACTCGGACTGGCATATATGGCTGCGAATGATAACAAGGAATTTCTCACATCCTTATCTAATATAATGAGGTACAAAATAGATGCTGGACTTTCCGAATCCTATACATGCTATTTATTAAGTAAGGGAAAGATCATAAGACCATATCTGAAAAATCTAAATCCACTCCAACTTGCCGCTGATTGCATTGAAACAGTAAATAAAATAAAAGATAAGAATAAAAAAATCATTGATATAAATTCAGTTAATATTTGTAGTGATGATAAAAATATAAAATTGAGAGTTAATAGTACTATTATGGCCATTGATGATTCTATAAAGTGCATCGATGAATGA", + "dna_sequence_length": 438, + "id": "CDS_3541", + "location": [ + [ + "NC_000913", + 3769345, + "+", + 327 + ], + [ + "NC_000913", + 3769673, + "+", + 111 + ] + ], + "md5": "44f44016c461bb4f3f2cd412151ac46f", + "parent_gene": "", + "protein_md5": "00a5e0d1afca1498744384a0e97aa721", + "protein_translation": "LADKAILWALISASTKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYKIDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNKIKDKNKKIIDINSVNICSDDKNIKLRVNSTIMAIDDSIKCIDE", + "protein_translation_length": 145, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4449" + ], + [ + "gene_synonym", + "EcoGene:EG14437" + ], + [ + "gene_synonym", + "GeneID:5625578" + ], + [ + "gene_synonym", + "b4652" + ], + [ + "gene_synonym", + "yibU" + ] + ], + "dna_sequence": "GACTGTCATCCTTCAGATAATAAAGCCATCATCGCAATAGATGGAAAAGCACTCCTGCTCTTTTTTGATTAGAGCCGTCGCAGGAGGGGAACAACTCATATCATCATTGCGATCTCGACGATGTATAGTCTCATCCTGCGGCAGAACAAGACGGATAAAAAATCCAATGAGAGCACACTCATCCAGAACTTATTAACATAA", + "dna_sequence_length": 201, + "id": "CDS_3542", + "location": [ + [ + "NC_000913", + 3769948, + "+", + 87 + ], + [ + "NC_000913", + 3770033, + "+", + 114 + ] + ], + "md5": "2c04b9b800fc9b27a60626ad8838f6de", + "parent_gene": "", + "protein_md5": "9b0bbee01fd2cc2f2cb6c3447a493e14", + "protein_translation": "DCHPSDNKAIIAIDGKALLLFFD", + 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"gene_synonym", + "ECK3603" + ], + [ + "gene_synonym", + "EcoGene:EG12297" + ], + [ + "gene_synonym", + "GI:162135913" + ], + [ + "gene_synonym", + "GeneID:948129" + ], + [ + "gene_synonym", + "JW5646" + ], + [ + "gene_synonym", + "NP_418070.6" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37690" + ], + [ + "gene_synonym", + "b3613" + ], + [ + "gene_synonym", + "envC" + ], + [ + "gene_synonym", + "slm11" + ], + [ + "gene_synonym", + "yibP" + ] + ], + "dna_sequence": 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"functions": [ + "putative polysaccharide deacetylase" + ], + "id": "CDS_3561", + "location": [ + [ + "NC_000913", + 3788101, + "+", + 960 + ] + ], + "md5": "0acf89485752989046b4ed298384c5b6", + "parent_gene": "", + "protein_md5": "f6b373a1f343429f4ab9a7b3b3e187a2", + "protein_translation": "MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPATVRVLQQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPVYANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN", + "protein_translation_length": 319, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011826" + ], + [ + "gene_synonym", + "ECK3605" + ], + [ + "gene_synonym", + "EcoGene:EG11266" + ], + [ + "gene_synonym", + "GI:16131486" + ], + [ + "gene_synonym", + "GeneID:948140" + ], + [ + "gene_synonym", + "JW3590" + ], + [ + "gene_synonym", + "NP_418072.1" + ], + [ + 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"gene_synonym", + "JW3591" + ], + [ + "gene_synonym", + "NP_418073.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07913" + ], + [ + "gene_synonym", + "b3616" + ], + [ + "gene_synonym", + "tdh" + ] + ], + "dna_sequence": 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"GeneID:948137" + ], + [ + "gene_synonym", + "JW5644" + ], + [ + "gene_synonym", + "NP_418075.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25666" + ], + [ + "gene_synonym", + "b3618" + ], + [ + "gene_synonym", + "htrL" + ], + [ + "gene_synonym", + "yibB" + ] + ], + "dna_sequence": 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"NC_000913", + 3793683, + "-", + 858 + ] + ], + "md5": "5e5a734fcb97fcd84e7d4a96d6614e08", + "parent_gene": "", + "protein_md5": "cf898b0287c333eeef482cb77870fe8c", + "protein_translation": "MKSSTTIITAYFDIGRGDWTANKGFREKLARSVDVYFSYFERLAALENEMIIFTSPDLKPRVEAIRNGKPTTVIVIDIKKKFRYIRSRIEKIQKDESFTNRLEPRQLKNPEYWSPEYVLVCNLKAYFVNKAINMGLVKTPLVAWIDFGYCHKPNVTRGLKIWDFPFDESKMHLFTIKKGLTVTSQQQVFDFMIGNHVYIIGGAIVGSQHKWKEFYKLVLESQKITLNNNIVDDDQGIFVMCYYKRPDLFNLNYLGRGKWFDLFRCFRSNTLGAKMQALRIFLSRK", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011843" + ], + [ + "gene_synonym", + "ECK3609" + ], + [ + "gene_synonym", + "EcoGene:EG10838" + ], + [ + "gene_synonym", + "GI:16131490" + ], + [ + "gene_synonym", + "GeneID:948134" + ], + [ + "gene_synonym", + "JW3594" + ], + [ + "gene_synonym", + "NP_418076.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P67910" + ], + [ + "gene_synonym", + "b3619" + ], + [ + "gene_synonym", + "gmhD" + ], + [ + "gene_synonym", + "hldD" + ], + [ + "gene_synonym", + "htrM" + ], + [ + "gene_synonym", + "nbsB" + ], + [ + "gene_synonym", + "rfaD" + ], + [ + "gene_synonym", + "waaD" + ] + ], + "dna_sequence": 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"ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding" + ], + "id": "CDS_3566", + "location": [ + [ + "NC_000913", + 3793987, + "+", + 933 + ] + ], + "md5": "ffb4a7a8516abb3ecdece2ba9ff71873", + "parent_gene": "", + "protein_md5": "d42624d49e07b165ca8ce2c4357ecf2d", + "protein_translation": "MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011845" + ], + [ + "gene_synonym", + "ECK3610" + ], + [ + "gene_synonym", + "EcoGene:EG12210" + ], + [ + "gene_synonym", + "GI:16131491" + ], + [ + "gene_synonym", + "GeneID:948135" + ], + [ + "gene_synonym", + "JW3595" + ], + [ + "gene_synonym", + "NP_418077.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37692" + ], + [ + "gene_synonym", + "b3620" + ], + [ + "gene_synonym", + "rfaF" + ], + [ + "gene_synonym", + "waaF" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW3596" + ], + [ + "gene_synonym", + "NP_418078.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24173" + ], + [ + "gene_synonym", + "b3621" + ], + [ + "gene_synonym", + "rfaC" + ], + [ + "gene_synonym", + "waaC" + ], + [ + "gene_synonym", + "yibC" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27243" + ], + [ + "gene_synonym", + "b3622" + ], + [ + "gene_synonym", + "rfaL" + ], + [ + "gene_synonym", + "waaL" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:948147" + ], + [ + "gene_synonym", + "JW3598" + ], + [ + "gene_synonym", + "NP_418080.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27242" + ], + [ + "gene_synonym", + "b3623" + ], + [ + "gene_synonym", + "rfaK" + ], + [ + "gene_synonym", + "waaK" + ], + [ + "gene_synonym", + "waaU" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW3599" + ], + [ + "gene_synonym", + "NP_418081.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27241" + ], + [ + "gene_synonym", + "b3624" + ], + [ + "gene_synonym", + "rfaZ" + ], + [ + "gene_synonym", + "waaZ" + ] + ], + "dna_sequence": 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"gene_synonym", + "rfaY" + ], + [ + "gene_synonym", + "waaY" + ] + ], + "dna_sequence": "ATGATTCAGAAGAGCAAGATCAAAGACTTGGTTGTTTTTACCGATGAAAACAATTCAAAGTACCTCAATGTATTAAATGACTTCTTGTCTTATAATATAAATATCATCAAGGTTTTTCGTTCTATTGATGATACAAAAGTTATGCTTATTGATACCGATTACGGTAAATTGATTCTTAAGGTTTTTTCTCCGAAAGTTAAGCGTAACGAACGTTTCTTTAAGTCTCTGTTAAAAGGTGATTATTACGAACGCCTTTTTGAGCAAACCCAAAAAGTACGAAATGAAGGGTTAAATACACTCAATGACTTTTATTTATTGGCTGAACGGAAAACCTTACGTTTTGTCCATACTTATATCATGATCATCGAGTATATTGATGGCATAGAGTTGTGTGATATGCCCGATATTGATGATGCGCTAAAAAATAAAATTCAGCAATCAATTAATGCCTTACATCAACATGGCATGGTTTCTGGCGACCCCCATCGTGGTAACTTCATTATAAAAAATGGTGAGGTTCGAATTATCGATCTCTCCGGAAAGCGTGCTTCAGCGCAGCGTAAAGCGAAAGATCGTATTGACTTAGAGCGTCATTACGGTATTAAAAATGAGATTAGAGATCTAGGCTATTATCTTTTAGTATATCGTAAAAAAATGCGCAATTTTATGCGGCGTTTGAAAGGGAAACCAGCGCGCTAA", + "dna_sequence_length": 699, + "functions": [ + "lipopolysaccharide core biosynthesis protein" + ], + "id": "CDS_3572", + "location": [ + [ + "NC_000913", + 3800965, + "-", + 699 + ] + ], + "md5": "25719ec2d92e5dae0a81a834cf1d78d3", + "parent_gene": "", + "protein_md5": "11985a3d246f43ca04a18adbe64c7d7a", + "protein_translation": "MIQKSKIKDLVVFTDENNSKYLNVLNDFLSYNINIIKVFRSIDDTKVMLIDTDYGKLILKVFSPKVKRNERFFKSLLKGDYYERLFEQTQKVRNEGLNTLNDFYLLAERKTLRFVHTYIMIIEYIDGIELCDMPDIDDALKNKIQQSINALHQHGMVSGDPHRGNFIIKNGEVRIIDLSGKRASAQRKAKDRIDLERHYGIKNEIRDLGYYLLVYRKKMRNFMRRLKGKPAR", + "protein_translation_length": 232, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011858" + ], + [ + "gene_synonym", + "ECK3616" + ], + [ + "gene_synonym", + "EcoGene:EG11353" + ], + [ + "gene_synonym", + "GI:16131497" + ], + [ + "gene_synonym", + "GeneID:948142" + ], + [ + "gene_synonym", + "JW3601" + ], + [ + "gene_synonym", + "NP_418083.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27129" + ], + [ + "gene_synonym", + "b3626" + ], + [ + "gene_synonym", + "rfaJ" + ], + [ + "gene_synonym", + "rfaN" + ], + [ + "gene_synonym", + "waaJ" + ], + [ + "gene_synonym", + "waaR" + ] + ], + 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"gene_synonym", + "GeneID:948143" + ], + [ + "gene_synonym", + "JW3602" + ], + [ + "gene_synonym", + "NP_418084.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27128" + ], + [ + "gene_synonym", + "b3627" + ], + [ + "gene_synonym", + "rfaI" + ], + [ + "gene_synonym", + "rfaM" + ], + [ + "gene_synonym", + "waaI" + ], + [ + "gene_synonym", + "waaO" + ] + ], + "dna_sequence": 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"GeneID:948144" + ], + [ + "gene_synonym", + "JW3603" + ], + [ + "gene_synonym", + "NP_418085.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27127" + ], + [ + "gene_synonym", + "b3628" + ], + [ + "gene_synonym", + "lps" + ], + [ + "gene_synonym", + "phx*" + ], + [ + "gene_synonym", + "rfaB" + ], + [ + "gene_synonym", + "syn*" + ], + [ + "gene_synonym", + "waaB" + ] + ], + "dna_sequence": "ATGAAAATAGCGTTTATCGGCGAAGCTGTTTCTGGATTTGGCGGCATGGAAACTGTCATCCGTGATGTTATTACTACCTTCAGGCAACAACATATCCAAAGTGAAATGTTTTTCTTTTGTCGTAATGACAAAATGGATAAGGGATGGCTGGAAGGTATTAAATACTCATGTTCATTTTCCAATATTCGTTTAGGTTTTTTGCGTCGGGCGAAACATATTCATGCTCTAAGTAAATGGCTTCAGGAGTACCAACCAGATATCGTTATTTGTATTGATGTGATCTCCTGCCTGTTTGCCGCAAAAGCACGTAAAAAATCAGGAATTGATATGCCAGTATTTTCATGGCCACATTTTTCTTTAGATCACAAAAAACATGCTGAATATATCACCTGTGCCGACTATCATTTAGCAATCAGCTCTGGCATTAAACAGCAAATGATTAATCGAGGTGTAGCAGAATCGACGATAAATGTTATTTTTAATCCCGTCGAAACTAAAGACTCAGTCATTCCCGCGCCCGAGGAAGGTGAAACGGCAACGTTTATTTATGTTGGGCGTATGAAATTTGAAGGCCAGAAAAGAGTTAAAGACCTGCTTGATGGCTTATCACAAGCGAAAGGTAACTGGAAACTCCATGTATTGGGTGATGGCTCCGATTTCGAAAAATGCCAGGCTTATGGTAGAGAATTAAATATTGATGATCGAATTGTCTGGTATGGTTGGCAACAATATCCCTGGGAATTGGTCCAGCAAGATATTGAAAAAGTGAGTGCGTTATTGCTCACGTCATCTTTTGAAGGTTTCCCAATGACCCTACTTGAAGCCTTGTCGTGGGGGATTCCTTGTATCAGTGCCGATTGTGTCTCCGGGCCTGCTGACATTATTCAACCTGATGTCAATGGCCATCTGTATCAACCGGGAGATATTGCTGGTTTTGTAACTCTTCTAAATAAATATATAGCAGGTGAAATTCATATCGAACATGAAAAAATTCCTGCGTCGATCGATGAATTTTACCAATCGAAGTATTACGATAGATTACATAAGGTAATTATTTCTGCTATTTCCCGGAGGAAATAA", 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"gene_synonym", + "GI:16131500" + ], + [ + "gene_synonym", + "GeneID:948151" + ], + [ + "gene_synonym", + "JW3604" + ], + [ + "gene_synonym", + "NP_418086.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27126" + ], + [ + "gene_synonym", + "b3629" + ], + [ + "gene_synonym", + "rfaS" + ], + [ + "gene_synonym", + "waaS" + ] + ], + "dna_sequence": "ATGACTATTTATTTTATAAATTGGGTTGCAGATTATGAATTAAAAATGATTCAGTACCTGAAAAAAAAGTACAAGATAAAAAATATAACAACACCAAAAAAATATAACTGGATTAATAAAAAAATATCAAAAATAGGGATGGATAATGCATGGCTGGGGCGATTATTCATCAAGCATTACCTCAATGATATTAAAAAAGATGACATAATTATCATTAATGACAGTGTTGTTAATAAAGGTATCAATAAACAAATATTAAAAAATATTAACTGTCATAAAGTTTTGCTTCTAAGAAATACTGTTGGCGAAGATTTTATTCTTGATAACGCGAATTATTTCGATATTATATATGATTTTGAGCATAGATTTATAGGGAATGAAAAGATCAAGGCAATAGAACAATTTTTTCCTATAGGAATGGATGAAATTAGAAATTATAGTTTATCTGACAAAAATAACAGCCAGCCAATATGTTTTTTCCTTGGTCGTGATAAAGGGCGTCTTCAAATAATTAATGAGTTAGCCGAGAGATTAACAACACTAGGATGTAAGCTAGATTTTAATGTTGTCAAAGATAAGACATCATCTACGACTTCAAAGTATTTGATTGAAAAACAAATATCTTATGAAGAGAATATTAGAAGAACATTAAATGCTAATATAATTGTTGATATAACCAAAGAAAACCAATCTGGCTGGACTCTTCGTATACTTGAGGCACTATTTTTCAATAAAAAATTAATTACTAATAATATAAATGTATTTGGTTCAGAAATCTATAGTGAATCTCGCTTTTTTATAATAGGTCATGATGATTGGGATAAGTTAGAGTATTTTATTAACTCATCTGTTAAACCAATGGATTATGATAGTTTATATAAATTCAGTCCAGATAAAATGATGTCAACGATTGTTTCTGATTTTATAGACAAATAA", + "dna_sequence_length": 936, + "functions": [ + "lipopolysaccharide rhamnose:KdoIII transferase", + "lipopolysaccharide core biosynthesis protein" + ], + "id": "CDS_3576", + "location": [ + [ + "NC_000913", + 3805116, + "-", + 936 + ] + ], + "md5": "8d5a292697a0db3ddcb7e1815ed1148e", + "parent_gene": "", + "protein_md5": "144003c1c98ec31b8db4e4303efb5bb5", + "protein_translation": "MTIYFINWVADYELKMIQYLKKKYKIKNITTPKKYNWINKKISKIGMDNAWLGRLFIKHYLNDIKKDDIIIINDSVVNKGINKQILKNINCHKVLLLRNTVGEDFILDNANYFDIIYDFEHRFIGNEKIKAIEQFFPIGMDEIRNYSLSDKNNSQPICFFLGRDKGRLQIINELAERLTTLGCKLDFNVVKDKTSSTTSKYLIEKQISYEENIRRTLNANIIVDITKENQSGWTLRILEALFFNKKLITNNINVFGSEIYSESRFFIIGHDDWDKLEYFINSSVKPMDYDSLYKFSPDKMMSTIVSDFIDK", + "protein_translation_length": 311, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011866" + ], + [ + "gene_synonym", + "ECK3620" + ], + [ + "gene_synonym", + "EcoGene:EG11340" + ], + [ + "gene_synonym", + "GI:16131501" + ], + [ + "gene_synonym", + "GeneID:948150" + ], + [ + "gene_synonym", + "JW3605" + ], + [ + "gene_synonym", + "NP_418087.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25741" + ], + [ + "gene_synonym", + "b3630" + ], + [ + "gene_synonym", + "rfaP" + ], + [ + "gene_synonym", + "waaP" + ] + ], + "dna_sequence": "ATGGTTGAATTAAAAGAGCCGCTTGCCACACTTTGGCGTGGTAAAGATGCTTTTGCAGAGGTCAAAAAACTGAACGGCGAGGTCTTTCGTGAACTGGAGACTCGTCGTACATTACGCTTTGAACTGTCCGGGAAAAGCTATTTTCTTAAATGGCACAAGGGGACGACATTAAAAGAGATTATAAAAAATCTACTCTCATTGCGGATGCCCGTTTTGGGCGCAGACAGAGAGTGGCACGCTATTCATCGCCTGAGTGATGTTGGCGTTGATACAATGAAGGGCATTGGGTTTGGCGAAAAAGGGTTAAATCCATTAACTCGCGCATCATTTATTATTACCGAAGATCTCACTCCCACAATTAGCCTTGAAGATTATTGTGCCGATTGGGCAGTCAACCCGCCTGATATACGTGTTAAGCGTATGCTGATCGCACGTGTAGCAACTATGGTGCGTAAAATGCATACTGCAGGGATAAATCACCGCGACTGTTACATTTGCCACTTTTTGCTTCATTTGCCATTTACTGGCCGGGAAGATGAATTAAAAATTTCAGTTATCGATCTGCATCGGGCACAGATACGTGCAAAAGTACCGCGCCGCTGGCGCGATAAAGACCTGATTGGTTTATATTTCTCATCAATGAATATTGGCCTGACGCAAAGAGATATCTGGCGATTTATGAAGGTTTATTTTGGGATGCCTTTACGCAAAATATTGTCTCTTGAACAGAATTTATTGAACATGGCAAGCGTTAAGGCCGAGCGTATTAAAGAGCGAACACAACGCAAAGGATTATAA", + "dna_sequence_length": 798, + "functions": [ + "kinase that phosphorylates core heptose of lipopolysaccharide" + ], + "id": "CDS_3577", + "location": [ + [ + "NC_000913", + 3805950, + "-", + 798 + ] + ], + "md5": "b8f989554d953e48c90391fc5bf2a15a", + "parent_gene": "", + "protein_md5": "d81661e1b38bb1dd15d6ed2325b21225", + "protein_translation": "MVELKEPLATLWRGKDAFAEVKKLNGEVFRELETRRTLRFELSGKSYFLKWHKGTTLKEIIKNLLSLRMPVLGADREWHAIHRLSDVGVDTMKGIGFGEKGLNPLTRASFIITEDLTPTISLEDYCADWAVNPPDIRVKRMLIARVATMVRKMHTAGINHRDCYICHFLLHLPFTGREDELKISVIDLHRAQIRAKVPRRWRDKDLIGLYFSSMNIGLTQRDIWRFMKVYFGMPLRKILSLEQNLLNMASVKAERIKERTQRKGL", + "protein_translation_length": 265, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011868" + ], + [ + "gene_synonym", + "ECK3621" + ], + [ + "gene_synonym", + "EcoGene:EG11339" + ], + [ + "gene_synonym", + "GI:16131502" + ], + [ + "gene_synonym", + "GeneID:948149" + ], + [ + "gene_synonym", + "JW3606" + ], + [ + "gene_synonym", + "NP_418088.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25740" + ], + [ + "gene_synonym", + "b3631" + ], + [ + "gene_synonym", + "rfaG" + ], + [ + "gene_synonym", + "waaG" + ] + ], + "dna_sequence": "ATGATCGTGGCGTTTTGTTTATATAAATATTTTCCATTTGGTGGGCTTCAACGTGACTTTATGCGCATTGCATCAACAGTTGCCGCACGGGGCCACCATGTTCGGGTATATACACAGTCGTGGGAAGGCGATTGCCCGAAAGCATTTGAGCTTATTCAGGTGCCAGTTAAGTCCCATACCAACCATGGACGCAATGCAGAATATTATGCCTGGGTACAAAATCATCTCAAAGAGCATCCCGCAGATCGCGTTGTTGGGTTTAATAAGATGCCTGGCCTGGATGTTTATTTTGCCGCTGATGTTTGTTACGCCGAGAAAGTTGCGCAAGAAAAAGGTTTTTTATATCGTTTAACATCACGATATCGCCATTATGCCGCATTTGAGCGAGCGACTTTCGAGCAGGGTAAATCGACGAAACTTATGATGCTGACCGATAAGCAAATCGCCGATTTCCAGAAGCATTATCAAACTGAACCTGAACGTTTTCAAATTCTTCCTCCCGGTATTTATCCGGACAGAAAATACAGTGAGCAAATCCCAAACAGCCGTGAAATTTATCGCCAGAAAAATGGCATAAAAGAGCAACAAAACTTATTACTGCAGGTTGGATCAGATTTTGGCCGTAAAGGTGTAGATCGCTCAATTGAAGCTTTGGCATCGTTACCGGAATCATTACGTCACAATACGCTTTTATTTGTTGTTGGTCAGGATAAGCCGCGAAAATTTGAAGCGCTGGCAGAAAAACTCGGCGTGCGGAGCAATGTGCATTTCTTCTCCGGTCGCAATGATGTGTCAGAATTAATGGCAGCCGCTGATTTATTACTGCATCCCGCTTATCAGGAAGCCGCGGGTATCGTTCTTCTAGAAGCGATCACTGCTGGGTTACCTGTTTTAACAACAGCGGTATGTGGGTACGCGCATTATATTGCGGATGCCAATTGTGGAACGGTCATCGCTGAACCTTTCTCTCAGGAACAATTAAATGAAGTTTTACGTAAAGCGTTAACTCAGTCGCCATTGCGAATGGCCTGGGCGGAGAATGCTCGCCATTATGCCGATACTCAGGATTTGTATAGCTTGCCAGAAAAAGCCGCGGATATCATTACAGGTGGTTTAGATGGTTGA", 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"gene_synonym", + "JW3625" + ], + [ + "gene_synonym", + "NP_418107.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AG24" + ], + [ + "gene_synonym", + "b3650" + ], + [ + "gene_synonym", + "spoT" + ] + ], + "dna_sequence": 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"GeneID:948172" + ], + [ + "gene_synonym", + "JW3629" + ], + [ + "gene_synonym", + "NP_418111.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGM9" + ], + [ + "gene_synonym", + "b3654" + ], + [ + "gene_synonym", + "xanP" + ], + [ + "gene_synonym", + "yicE" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16131526" + ], + [ + "gene_synonym", + "GeneID:948171" + ], + [ + "gene_synonym", + "JW3630" + ], + [ + "gene_synonym", + "NP_418112.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31433" + ], + [ + "gene_synonym", + "b3655" + ], + [ + "gene_synonym", + "yicH" + ] + ], + "dna_sequence": 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"aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011951" + ], + [ + "gene_synonym", + "ECK3646" + ], + [ + "gene_synonym", + "EcoGene:EG11685" + ], + [ + "gene_synonym", + "GI:16131527" + ], + [ + "gene_synonym", + "GeneID:948169" + ], + [ + "gene_synonym", + "JW3631" + ], + [ + "gene_synonym", + "NP_418113.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31434" + ], + [ + "gene_synonym", + "b3656" + ], + [ + "gene_synonym", + "yicI" + ] + ], + "dna_sequence": 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"gene_synonym", + "b4653" + ], + [ + "gene_synonym", + "erhM" + ], + [ + "gene_synonym", + "rhuM" + ], + [ + "gene_synonym", + "yicT" + ] + ], + "dna_sequence": "ATGGACGATGAGCGGCTGAAGAATCCGCCTGTCGGTTCTTCTGTCCTCGAACGCATCCGCGATATTCACGCCAGTATGCGCCGTGTTTATTTGCAGGTGATTTGCCCCCCTGCTGACTCTCAGCCAACTGTA", + "dna_sequence_length": 132, + "id": "CDS_3605", + "location": [ + [ + "NC_000913", + 3836425, + "+", + 132 + ] + ], + "md5": "dff1a5e4ef3be24553ac10cd306bc31e", + "parent_gene": "", + "protein_md5": "d65df6b24ac2c6b544dd539b5fdb483a", + "protein_translation": "MDDERLKNPPVGSSVLERIRDIHASMRRVYLQVICPPADSQPTV", + "protein_translation_length": 44, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0011959" + ], + [ + "gene_synonym", + "ECK3649" + ], + [ + "gene_synonym", + "EcoGene:EG11687" + ], + [ + "gene_synonym", + "GI:16131529" + ], + [ + "gene_synonym", + "GeneID:948177" + ], + [ + "gene_synonym", + "JW3633" + ], + [ + "gene_synonym", + "NP_418115.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31436" + ], + [ + "gene_synonym", + "b3659" + ], + [ + "gene_synonym", + "setC" + ], + [ + "gene_synonym", + "yicK" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:948176" + ], + [ + "gene_synonym", + "JW3634" + ], + [ + "gene_synonym", + "NP_418116.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31437" + ], + [ + "gene_synonym", + "b3660" + ], + [ + "gene_synonym", + "yicL" + ] + ], + "dna_sequence": 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"Cou" + ], + [ + "gene_synonym", + "ECK3691" + ], + [ + "gene_synonym", + "EcoGene:EG10424" + ], + [ + "gene_synonym", + "GI:49176395" + ], + [ + "gene_synonym", + "GeneID:948211" + ], + [ + "gene_synonym", + "JW5625" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AES6" + ], + [ + "gene_synonym", + "YP_026241.1" + ], + [ + "gene_synonym", + "acrB" + ], + [ + "gene_synonym", + "b3699" + ], + [ + "gene_synonym", + "gyrB" + ], + [ + "gene_synonym", + "himB" + ], + [ + "gene_synonym", + "hisU" + ], + [ + "gene_synonym", + "hopA" + ], + [ + "gene_synonym", + "nalC" + ], + [ + "gene_synonym", + "parA" + ], + [ + "gene_synonym", + "pcbA" + ], + [ + "gene_synonym", + "pcpA" + ] + ], + "dna_sequence": 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"MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMERRYPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLFEPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFEQALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALKAANIDI", + "protein_translation_length": 804, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012095" + ], + [ + "gene_synonym", + "ECK3692" + ], + [ + "gene_synonym", + "EcoGene:EG10828" + ], + [ + "gene_synonym", + "GI:16131568" + ], + [ + "gene_synonym", + "GeneID:948209" + ], + [ + "gene_synonym", + "JW3677" + ], + [ + "gene_synonym", + "NP_418155.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7H0" + ], + [ + "gene_synonym", + "b3700" + ], + [ + "gene_synonym", + "recF" + ], + [ + "gene_synonym", + "uvrF" + ] + ], + "dna_sequence": 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"JW3678" + ], + [ + "gene_synonym", + "NP_418156.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A988" + ], + [ + "gene_synonym", + "b3701" + ], + [ + "gene_synonym", + "dnaN" + ] + ], + "dna_sequence": 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transferase superfamily protein" + ], + "id": "CDS_3661", + "location": [ + [ + "NC_000913", + 3893881, + "+", + 750 + ] + ], + "md5": "f40b66b7934626e94972cab13a5d195a", + "parent_gene": "", + "protein_md5": "771aad9222bb4ada72854819b4f785b9", + "protein_translation": "MATHFARGILTEGHLISVRLPSQCHQEARNIPPHRQSRFLASRGLLAELMFMLYGIGELPEIVTLPKGKPVFSDKNLPSFSISYAGNMVGVALTTEGECGLDMELQRATRGFHSPHAPDNHTFSSNESLWISKQNDPNEARAQLITLRRSVLKLTGDVLNDDPRDLQLLPIAGRLKCAHVNHVEALCDAEDVLVWSVAVTPTIEKLSVWELDGKHGWKSLPDIHSRANNPTSRMMRFAQLSTVKAFSPN", + "protein_translation_length": 249, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012146" + ], + [ + "gene_synonym", + "ECK3706" + ], + [ + "gene_synonym", + "EcoGene:EG11723" + ], + [ + "gene_synonym", + "GI:16131581" + ], + [ + "gene_synonym", + "GeneID:948225" + ], + [ + "gene_synonym", + "JW3691" + ], + [ + "gene_synonym", + "NP_418169.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGE6" + ], + [ + "gene_synonym", + "b3713" + ], + 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"protein_translation_length": 155, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012158" + ], + [ + "gene_synonym", + "ECK3710" + ], + [ + "gene_synonym", + "EcoGene:EG11727" + ], + [ + "gene_synonym", + "GI:16131585" + ], + [ + "gene_synonym", + "GeneID:948230" + ], + [ + "gene_synonym", + "JW3695" + ], + [ + "gene_synonym", + "NP_418173.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31469" + ], + [ + "gene_synonym", + "b3717" + ], + [ + "gene_synonym", + "cbrC" + ], + [ + "gene_synonym", + "yieJ" + ] + ], + "dna_sequence": 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"ASAP:ABE-0012169" + ], + [ + "gene_synonym", + "ECK3714" + ], + [ + "gene_synonym", + "EcoGene:EG10114" + ], + [ + "gene_synonym", + "GI:16131589" + ], + [ + "gene_synonym", + "GeneID:948234" + ], + [ + "gene_synonym", + "JW3699" + ], + [ + "gene_synonym", + "NP_418177.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11988" + ], + [ + "gene_synonym", + "b3721" + ], + [ + "gene_synonym", + "bglB" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK3733" + ], + [ + "gene_synonym", + "EcoGene:EG10376" + ], + [ + "gene_synonym", + "GI:16131608" + ], + [ + "gene_synonym", + "GeneID:948250" + ], + [ + "gene_synonym", + "JW3718" + ], + [ + "gene_synonym", + "NP_418196.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6U5" + ], + [ + "gene_synonym", + "b3740" + ], + [ + "gene_synonym", + "gidB" + ], + [ + "gene_synonym", + "rsmG" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG10816" + ], + [ + "gene_synonym", + "GI:16131618" + ], + [ + "gene_synonym", + "GeneID:948262" + ], + [ + "gene_synonym", + "JW3729" + ], + [ + "gene_synonym", + "NP_418206.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGI1" + ], + [ + "gene_synonym", + "b3750" + ], + [ + "gene_synonym", + "rbsC" + ], + [ + "gene_synonym", + "rbsP" + ], + [ + "gene_synonym", + "rbsT" + ] + ], + "dna_sequence": 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"gene_synonym", + "b3753" + ], + [ + "gene_synonym", + "rbsR" + ] + ], + "dna_sequence": "TTGGCTACAATGAAAGATGTTGCCCGCCTGGCGGGCGTTTCTACCTCAACAGTTTCTCACGTTATCAATAAAGATCGCTTCGTCAGTGAAGCGATTACCGCCAAAGTTGAAGCGGCGATTAAAGAACTCAATTACGCGCCATCAGCTCTGGCGCGTAGCCTCAAACTCAATCAAACACATACCATTGGCATGTTGATCACTGCCAGTACCAATCCTTTCTATTCAGAACTGGTGCGTGGCGTTGAACGCAGCTGCTTCGAACGCGGTTATAGTCTCGTCCTTTGCAATACCGAAGGCGATGAACAGCGGATGAATCGCAATCTGGAAACGCTGATGCAAAAACGCGTTGATGGCTTGCTGTTACTGTGCACCGAAACGCATCAACCTTCGCGTGAAATCATGCAACGTTATCCGACAGTGCCTACTGTGATGATGGACTGGGCTCCGTTCGATGGCGACAGCGATCTTATTCAGGATAACTCGTTGCTGGGCGGAGACTTAGCAACGCAATATCTGATCGATAAAGGTCATACCCGTATCGCCTGTATTACCGGCCCGCTGGATAAAACTCCGGCGCGCCTGCGGTTGGAAGGTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCATTAACCACTATCCACCAACCGAAAGATGAACTGGGGGAGCTGGCGATTGATGTACTCATCCATCGGATAACCCAGCCGACCCTTCAGCAACAACGATTACAACTTACTCCGATTCTGATGGAACGCGGTTCGGCTTAG", + 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], + [ + "gene_synonym", + "NP_418210.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31474" + ], + [ + "gene_synonym", + "b3754" + ], + [ + "gene_synonym", + "hsrA" + ], + [ + "gene_synonym", + "yieO" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG11733" + ], + [ + "gene_synonym", + "GI:49176401" + ], + [ + "gene_synonym", + "GeneID:948263" + ], + [ + "gene_synonym", + "JW5608" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P31475" + ], + [ + "gene_synonym", + "YP_026245.1" + ], + [ + "gene_synonym", + "b3755" + ], + [ + "gene_synonym", + "yieP" + ] + ], + "dna_sequence": 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"EcoGene:EG14474" + ], + [ + "gene_synonym", + "GI:226524760" + ], + [ + "gene_synonym", + "GeneID:7751639" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P619" + ], + [ + "gene_synonym", + "YP_002791259.1" + ], + [ + "gene_synonym", + "b4669" + ], + [ + "gene_synonym", + "ilvX" + ] + ], + "dna_sequence": "ATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAA", + "dna_sequence_length": 51, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3709", + "location": [ + [ + "NC_000913", + 3950507, + "+", + 51 + ] + ], + "md5": "44028cea3369f75213f9c47d7c93c9fe", + "parent_gene": "", + "protein_md5": "b4ff8754ddd5cb345c036c16fef620d6", + "protein_translation": "MNNSTKFCFSRFRTGN", + "protein_translation_length": 16, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012309" + ], + [ + "gene_synonym", + "ASAP:ABE-0012311" + ], + [ + "gene_synonym", + "ASAP:ABE-0174552" + ], + [ + "gene_synonym", + "ECK3760" + ], + [ + "gene_synonym", + "EcoGene:EG10498" + 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"ATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCTATGCCGACATGAGCAGGGTGCGGCAATGGCGGCTATCGGTTATGCTCGTGCTACCGGCAAAACTGGCGTATGTATCGCCACGTCTGGTCCGGGCGCAACCAACCTGATAACCGGGCTTGCGGACGCACTGTTAGATTCCATCCCTGTTGTTGCCATCACCGGTCAAGTGTCCGCACCGTTTATCGGCACTGACGCATTTCAGGAAGTGGATGTCCTGGGATTGTCGTTAGCCTGTACCAAGCACAGCTTTCTGGTGCAGTCGCTGGAAGAGTTGCCGCGCATCATGGCTGAAGCATTCGACGTTGCCTGCTCAGGTCGTCCTGGTCCGGTTCTGGTCGATATCCCAAAAGATATCCAGTTAGCCAGCGGTGACCTGGAACCGTGGTTCACCACCGTTGAAAACGAAGTGACTTTCCCACATGCCGAAGTTGAGCAAGCGCGCCAGATGCTGGCAAAAGCGCAAAAACCGATGCTGTACGTTGGCGGTGGCGTGGGTATGGCGCAGGCAGTTCCGGCTTTGCGTGAATTTCTCGCTGCCACAAAAATGCCTGCCACCTGTACGCTGAAAGGGCTGGGCGCAGTAGAAGCAGATTATCCGTACTATCTGGGCATGCTGGGGATGCACGGCACCAAAGCGGCAAACTTCGCGGTGCAGGAGTGTGACCTGCTGATCGCCGTGGGCGCACGTTTTGATGACCGGGTGACCGGCAAACTGAACACCTTCGCGCCACACGCCAGTGTTATCCATATGGATATCGACCCGGCAGAAATGAACAAGCTGCGTCAGGCACATGTGGCATTACAAGGTGATTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGAGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATCCCGGTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCACCAGATGTGGGCTGCGCAGCACATCGCCCACACTCGCCCGGAAAATTTCATCACCTCCAGCGGTTTAGGTACCATGGGTTTTGGTTTACCGGCGGCGGTTGGCGCACAAGTCGCGCGACCGAACGATACCGTTGTCTGTATCTCCGGTGACGGCTCTTTCATGATGAATGTGCAAGAGCTGGGCACCGTAAAACGCAAGCAGTTACCGTTGAAAATCGTCTTACTCGATAACCAACGGTTAGGGATGGTTCGACAATGGCAGCAACTGTTTTTTCAGGAACGATACAGCGAAACCACCCTTACTGATAACCCCGATTTCCTCATGTTAGCCAGCGCCTTCGGCATCCATGGCCAACACATCACCCGGAAAGACCAGGTTGAAGCGGCACTCGACACCATGCTGAACAGTGATGGGCCATACCTGCTTCATGTCTCAATCGACGAACTTGAGAACGTCTGGCCGCTGGTGCCGCCTGGCGCCAGTAATTCAGAAATGTTGGAGAAATTATCATGA", 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"gene_synonym", + "ECK3762" + ], + [ + "gene_synonym", + "EcoGene:EG10497" + ], + [ + "gene_synonym", + "GI:49176403" + ], + [ + "gene_synonym", + "GeneID:948278" + ], + [ + "gene_synonym", + "JW5606" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AB80" + ], + [ + "gene_synonym", + "YP_026247.1" + ], + [ + "gene_synonym", + "b3770" + ], + [ + "gene_synonym", + "ilvE" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG12352" + ], + [ + "gene_synonym", + "GI:16131633" + ], + [ + "gene_synonym", + "GeneID:948285" + ], + [ + "gene_synonym", + "JW3748" + ], + [ + "gene_synonym", + "NP_418223.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9L5" + ], + [ + "gene_synonym", + "b3775" + ], + [ + "gene_synonym", + "parvA" + ], + [ + "gene_synonym", + "ppiC" + ] + ], + "dna_sequence": "ATGGCAAAAACAGCAGCAGCACTGCATATCCTTGTAAAAGAAGAGAAACTGGCTCTGGATCTTCTCGAGCAGATTAAGAACGGGGCCGATTTCGGCAAGCTGGCGAAGAAACACTCCATTTGCCCATCAGGCAAACGCGGCGGTGATTTAGGTGAATTCCGCCAGGGTCAGATGGTTCCGGCGTTCGATAAAGTGGTTTTCTCTTGTCCGGTACTGGAGCCGACCGGCCCGCTGCACACCCAGTTCGGATATCACATCATTAAGGTGCTGTACCGCAACTAA", + "dna_sequence_length": 282, + "functions": [ + "peptidyl-prolyl cis-trans isomerase C (rotamase C)" + ], + "id": "CDS_3717", + "location": [ + [ + "NC_000913", + 3959813, + "-", + 282 + ] + ], + "md5": "a9bf5b45cb9c2117959fb1494fbf337f", + "parent_gene": "", + "protein_md5": "f9de714674d1b64ac6831b260f357baa", 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"gene_synonym", + "ASAP:ABE-0012344" + ], + [ + "gene_synonym", + "ECK3770" + ], + [ + "gene_synonym", + "EcoGene:EG10837" + ], + [ + "gene_synonym", + "GI:49176407" + ], + [ + "gene_synonym", + "GeneID:948292" + ], + [ + "gene_synonym", + "JW5604" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09980" + ], + [ + "gene_synonym", + "YP_026251.1" + ], + [ + "gene_synonym", + "b3778" + ], + [ + "gene_synonym", + "dasC" + ], + [ + "gene_synonym", + "mbrA" + ], + [ + "gene_synonym", + "mmrA?" + ], + [ + "gene_synonym", + "rep" + ] + ], + "dna_sequence": 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"GI:16131653" + ], + [ + "gene_synonym", + "GeneID:949015" + ], + [ + "gene_synonym", + "JW3773" + ], + [ + "gene_synonym", + "NP_418245.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25549" + ], + [ + "gene_synonym", + "aslA" + ], + [ + "gene_synonym", + "atsA" + ], + [ + "gene_synonym", + "b3801" + ], + [ + "gene_synonym", + "gppB" + ] + ], + "dna_sequence": 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"ASAP:ABE-0012417" + ], + [ + "gene_synonym", + "ECK3796" + ], + [ + "gene_synonym", + "EcoGene:EG10434" + ], + [ + "gene_synonym", + "GI:16131654" + ], + [ + "gene_synonym", + "GeneID:948311" + ], + [ + "gene_synonym", + "JW3774" + ], + [ + "gene_synonym", + "NP_418246.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACB7" + ], + [ + "gene_synonym", + "b3802" + ], + [ + "gene_synonym", + "hemY" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:948446" + ], + [ + "gene_synonym", + "JW3775" + ], + [ + "gene_synonym", + "NP_418247.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09127" + ], + [ + "gene_synonym", + "b3803" + ], + [ + "gene_synonym", + "hemX" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:948587" + ], + [ + "gene_synonym", + "JW3776" + ], + [ + "gene_synonym", + "NP_418248.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09126" + ], + [ + "gene_synonym", + "b3804" + ], + [ + "gene_synonym", + "hemD" + ] + ], + "dna_sequence": 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"protein_md5": "2bdb56bd10d40c90391ee7b0246b6286", + "protein_translation": "MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGQQLPQLADQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQKILYPQDREISEVLLQLPELQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQRCAIHYDGAEEAMRWQAREVTMVVVTSGEMLQQLWSLIPQWYREHWLLHCRLLVVSERLAKLARELGWQDIKVADNADNDALLRALQ", + "protein_translation_length": 246, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012427" + ], + [ + "gene_synonym", + "ECK3799" + ], + [ + "gene_synonym", + "EcoGene:EG10429" + ], + [ + "gene_synonym", + "GI:49176416" + ], + [ + "gene_synonym", + "GeneID:947759" + ], + [ + "gene_synonym", + "JW5932" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06983" + ], + [ + "gene_synonym", + "YP_026260.1" + ], + [ + "gene_synonym", + "b3805" + ], + [ + "gene_synonym", + "hemC" + ], + [ + "gene_synonym", + "popE" + ] + ], + "dna_sequence": 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"hydroxymethylbilane synthase" + ], + "id": "CDS_3742", + "location": [ + [ + "NC_000913", + 3990766, + "-", + 942 + ] + ], + "md5": "61cecbc3b88eafef7e6e9d79dd6d5a06", + "parent_gene": "", + "protein_md5": "e821f2f40f67955d52f2418a6c928b16", + "protein_translation": "MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA", + "protein_translation_length": 313, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012432" + ], + [ + "gene_synonym", + "ECK3800" + ], + [ + "gene_synonym", + "EcoGene:EG10170" + ], + [ + "gene_synonym", + "GI:16131658" + ], + [ + "gene_synonym", + "GeneID:947755" + ], + [ + "gene_synonym", + "JW3778" + ], + [ + "gene_synonym", + "NP_418250.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P00936" + ], + [ + "gene_synonym", + "b3806" + ], + [ + "gene_synonym", + "cya" + ], + [ + "gene_synonym", + "cyaA" + ] + ], + "dna_sequence": 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"gene_synonym", + "UniProtKB/Swiss-Prot:P27848" + ], + [ + "gene_synonym", + "YP_026267.1" + ], + [ + "gene_synonym", + "b3826" + ], + [ + "gene_synonym", + "yigL" + ] + ], + "dna_sequence": "ATGTACCAGGTTGTTGCGTCTGATTTAGATGGCACGTTACTTTCTCCCGACCATACGTTATCCCCTTACGCCAAAGAAACTCTGAAGCTGCTCACCGCGCGCGGCATCAACTTTGTGTTTGCGACCGGTCGTCACCACGTTGATGTGGGGCAAATTCGCGATAATCTGGAGATTAAGTCTTACATGATTACCTCCAATGGTGCGCGCGTTCACGATCTGGATGGTAATCTGATTTTTGCTCATAACCTGGATCGCGACATTGCCAGCGATCTGTTTGGCGTAGTCAACGACAATCCGGACATCATTACTAACGTTTATCGCGACGACGAATGGTTTATGAATCGCCATCGCCCGGAAGAGATGCGCTTTTTTAAAGAAGCGGTGTTCCAATATGCGCTGTATGAGCCTGGATTACTGGAGCCGGAAGGCGTCAGCAAAGTGTTCTTCACCTGCGATTCCCATGAACAACTGCTGCCGCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGAAAGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGCATTATCTGCGTAAACTCTATTTATCGTAA", + 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"NP_418273.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P25665" + ], + [ + "gene_synonym", + "b3829" + ], + [ + "gene_synonym", + "metB12" + ], + [ + "gene_synonym", + "metE" + ] + ], + "dna_sequence": 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"MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRGRAPTGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLDEVDEALALGHKVKPVLLGPVTWLWLGKVKGEQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAYDALQGQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVAELHKRLPSDWLLSAGLINGRNVWRADLTEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSVETRLDAEVKSWFAFALQKCHELALLRDALNSGDTAALAEWSAPIQARRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLRRG", + "protein_translation_length": 753, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012522" + ], + [ + "gene_synonym", + "ECK3824" + ], + [ + "gene_synonym", + "EcoGene:EG14321" + ], + [ + "gene_synonym", + 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"GeneID:948336" + ], + [ + "gene_synonym", + "JW3822" + ], + [ + "gene_synonym", + "NP_418288.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P21177" + ], + [ + "gene_synonym", + "b3846" + ], + [ + "gene_synonym", + "fadB" + ], + [ + "gene_synonym", + "oldB" + ] + ], + "dna_sequence": 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oxidase, flavoprotein" + ], + "id": "CDS_3784", + "location": [ + [ + "NC_000913", + 4034608, + "+", + 546 + ] + ], + "md5": "d52cc241f8d79950616fa7d73086f930", + "parent_gene": "", + "protein_md5": "ad6248831722f542f9cdf5490e57ac85", + "protein_translation": "MKTLILFSTRDGQTREIASYLASELKELGIQADVANVHRIEEPQWENYDRVVIGASIRYGHYHSAFQEFVKKHATRLNSMPSAFYSVNLVARKPEKRTPQTNSYARKFLMNSQWRPDRCAVIAGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTDWEQVANFAREIAHLTDKPTLK", + "protein_translation_length": 181, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012591" + ], + [ + "gene_synonym", + "ECK3848" + ], + [ + "gene_synonym", + "EcoGene:EG11828" + ], + [ + "gene_synonym", + "GI:145698333" + ], + [ + "gene_synonym", + "GeneID:948343" + ], + [ + "gene_synonym", + "JW5575" + ], + [ + "gene_synonym", + "NP_418293.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32125" + ], + [ + "gene_synonym", + "b3856" + ], + [ + "gene_synonym", + "mobB" + ], + [ + "gene_synonym", + "yihC" + ] + ], + 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membrane protein, inner membrane acyltransferase" + ], + "id": "CDS_3791", + "location": [ + [ + "NC_000913", + 4046602, + "-", + 933 + ] + ], + "md5": "286eaa1439646be5567ba85e96f395dc", + "parent_gene": "", + "protein_md5": "2e6af8067c3570f99be06c87394bbcd2", + "protein_translation": "MANLLNKFIMTRILAAITLLLSIVLTILVTIFCSVPIIIAGIVKLLLPVPVIWRKVSRFCDFMMYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICNHRSWADIVVLCVLFRKHIPMNKYFLKQQLAWVPFLGLACWSLDMPFMKRYSRAYLLRHPERRGKDVETTRRSCEKFRLHPTTIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIAMALNVLGKQFDKLLNVTLCYPDNNRQPFFDMLSGKLTRIVVHVDLQPIADELHGDYINDKSFKRHFQQWLNSLWQEKDRLLTSLMSSQRQNK", + "protein_translation_length": 310, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012618" + ], + [ + "gene_synonym", + "ECK3855" + ], + [ + "gene_synonym", + "EcoGene:EG10746" + ], + [ + "gene_synonym", + "GI:16131704" + ], + [ + "gene_synonym", + "GeneID:948356" + ], + [ + "gene_synonym", + "JW3835" + ], + [ + "gene_synonym", + "NP_418300.1" + ], + [ + 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"gene_synonym", + "GI:226524761" + ], + [ + "gene_synonym", + "GeneID:7751621" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:C1P620" + ], + [ + "gene_synonym", + "YP_002791260.1" + ], + [ + "gene_synonym", + "b4686" + ], + [ + "gene_synonym", + "yshB" + ] + ], + "dna_sequence": "ATGCTGGAATCAATAATTAATCTGGTATCGAGTGGCGCAGTTGACAGCCACACACCGCAAACTGCCGTTGCTGCCGTGCTGTGTGCCGCAATGATTGGGCTGTTTAGCTGA", + "dna_sequence_length": 111, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_3796", + "location": [ + [ + "NC_000913", + 4053757, + "-", + 111 + ] + ], + "md5": "795c8d77fef667c979e18443a71fbecf", + "parent_gene": "", + "protein_md5": "d1bb35837393037c15140abb2b2e8095", + "protein_translation": "MLESIINLVSSGAVDSHTPQTAVAAVLCAAMIGLFS", + "protein_translation_length": 36, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012632" + ], + [ + "gene_synonym", + "ECK3861" + ], + [ + "gene_synonym", + "EcoGene:EG10385" + ], + [ + "gene_synonym", + "GI:16131708" + ], + [ + "gene_synonym", + "GeneID:948361" + ], + [ + "gene_synonym", + "JW3839" + ], + [ + "gene_synonym", + "NP_418304.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFB8" + ], + [ + "gene_synonym", + "b3868" + ], + [ + "gene_synonym", + "glnG" + ], + [ + "gene_synonym", + "glnT" + ], + [ + "gene_synonym", + "ntrC" + ] + ], + "dna_sequence": 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"ASAP:ABE-0012634" + ], + [ + "gene_synonym", + "ECK3862" + ], + [ + "gene_synonym", + "EcoGene:EG10387" + ], + [ + "gene_synonym", + "GI:16131709" + ], + [ + "gene_synonym", + "GeneID:948360" + ], + [ + "gene_synonym", + "JW3840" + ], + [ + "gene_synonym", + "NP_418305.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFB5" + ], + [ + "gene_synonym", + "b3869" + ], + [ + "gene_synonym", + "glnL" + ], + [ + "gene_synonym", + "glnR" + ], + [ + "gene_synonym", + "ntrB" + ] + ], + "dna_sequence": 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"GeneID:948370" + ], + [ + "gene_synonym", + "JW3841" + ], + [ + "gene_synonym", + "NP_418306.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9C5" + ], + [ + "gene_synonym", + "b3870" + ], + [ + "gene_synonym", + "glnA" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "ASAP:ABE-0012651" + ], + [ + "gene_synonym", + "ECK3865" + ], + [ + "gene_synonym", + "EcoGene:EG11838" + ], + [ + "gene_synonym", + "GI:16131712" + ], + [ + "gene_synonym", + "GeneID:948368" + ], + [ + "gene_synonym", + "JW3843" + ], + [ + "gene_synonym", + "NP_418308.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACM9" + ], + [ + "gene_synonym", + "b3872" + ], + [ + "gene_synonym", + "yihL" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_418310.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32135" + ], + [ + "gene_synonym", + "b3874" + ], + [ + "gene_synonym", + "yihN" + ] + ], + "dna_sequence": 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"ATGTCTGACCATAATCCACTGACATTAAAACTGAATCTGCGGGAAAAAATCGCCTATGGTATGGGCGACGTCGGTTCGAATTTAATGCTCTGCATCGGTACTCTGTATCTCCTCAAATTTTATACCGATGAATTAGGGATGCCTGCTTACTATGGCGGGATTATCTTTCTGGTGGCGAAGTTTTTTACCGCGTTTACCGATATGCTCACCGGATTTTTACTCGACTCGCGGAAAAATATTGGGCCTAAAGGCAAATTTCGTCCCTTTATTTTATATGCAGCGGTTCCGGCGGCGTTAATTGCAACGCTCCAGTTTATCGCCACCACCTTTTGTTTGCCGGTTAAAACGACGATTGCCACCGCGCTGTTTATGATGTTTGGACTTTCATACAGTCTGATGAACTGCTCGTATGGTGCGATGATCCCGGCAATTACCAAAAACCCGAATGAGCGCGCGCAGCTCGCGGCTTACCGCCAGGGTGGTGCAACCATAGGGCTATTGATTTGTACCGTGGCGTTTATTCCGTTGCAGTCGCTTTTTTCTGACTCAACCGTCGGTTATGCCTGTGCGGCACTTATGTTCTCCATTGGCGGCTTTATTTTTATGATGCTGTGCTACAGAGGCGTCAAAGAGCATTATGTGGACACAACGCCAACCGGACATAAAGCCAGTATTCTCAAATCATTTTGCGCGATATTTCGGAATCCGCCATTGCTGGTTTTATGCATTGCTAACTTGTGTACCCTGGCGGCATTTAATATCAAACTGGCGATTCAGGTCTATTACACCCAGTATGTGCTGAATGATATTAATTTATTGTCGTGGATGGGATTCTTCAGTATGGGATGCATCCTCATCGGCGTATTACTGGTGCCATTAACTGTAAAATGTTTTGGTAAAAAACAGGTTTATCTGGCTGGCATGGTGCTGTGGGCGGTGGGTGATATACTGAATTATTTCTGGGGAAGTAACTCTTTCACTTTCGTCATGTTCTCTTGTGTCGCCTTTTTTGGCACGGCCTTTGTAAACAGCCTGAACTGGGCACTGGTACCAGATACCGTAGATTACGGTGAATGGAAAACCGGTATTCGTGCCGAAGGTTCTGTTTATACCGGTTATACCTTCTTTCGTAAAATTTCTGCCGCACTTGCTGGCTTCTTGCCAGGCATTATGCTGACGCAAATTGGTTATGTTCCCAACATCGCGCAAAGCGATGCGACATTACAGGGTTTGCGTCAGCTCATTTTTATCTGGCCTTGTGCACTGGCAATTATTGCTGCATTGACGATGGGATTCTTTTACACACTCAATGAAAAACGGTTTGCATTGATTATTGAGGAAATCAACCAACGCAAAAATAAAGAGATGGCGACAGAAGAAAAAACGGCTTCCGTAACGTTATAA", 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+ ], + [ + "gene_synonym", + "GI:145698335" + ], + [ + "gene_synonym", + "GeneID:948371" + ], + [ + "gene_synonym", + "JW3848" + ], + [ + "gene_synonym", + "NP_418313.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32137" + ], + [ + "gene_synonym", + "b3877" + ], + [ + "gene_synonym", + "squP" + ], + [ + "gene_synonym", + "yihP" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG11843" + ], + [ + "gene_synonym", + "GI:16131718" + ], + [ + "gene_synonym", + "GeneID:948376" + ], + [ + "gene_synonym", + "JW3849" + ], + [ + "gene_synonym", + "NP_418314.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32138" + ], + [ + "gene_synonym", + "b3878" + ], + [ + "gene_synonym", + "squQ" + ], + [ + "gene_synonym", + "yihQ" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW3850" + ], + [ + "gene_synonym", + "NP_418315.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32139" + ], + [ + "gene_synonym", + "b3879" + ], + [ + "gene_synonym", + "squR" + ], + [ + "gene_synonym", + "yihR" + ] + ], + "dna_sequence": 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sulphoquinovose mutarotase" + ], + "id": "CDS_3808", + "location": [ + [ + "NC_000913", + 4070401, + "-", + 927 + ] + ], + "md5": "fc61b1321beca015e4ed81788e24f5d9", + "parent_gene": "", + "protein_md5": "a48761ec0424bffbccb1f5fcda6e7a6d", + "protein_translation": "MSLIKVPCMQITNMHCSGQTVSLAAGDYHATIVTVGAGLAELTFQGCHLVIPHKPEEMPLAHLGKVLIPWPNRIANGCYRYQGQEYQLPINEHSSKAAIHGLLAWRDWQISELTATSVTLTAFLPPSYGYPFMLASQVVYSLNAHTGLSVEIASQNIGTVAAPYGVGIHPYLTCNLTSVDEYLFQLPANQVYAVDEHANPTTLHHVDELDLNFTQAKKIAATKIDHTFKTANDLWEMTITHPQQALSVSLCSDQLWVQVYSGEKLQRQGLAVEPMSCPPNAFNSGIDLLLLESGKPHRLFFNIYGQRK", + "protein_translation_length": 308, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012673" + ], + [ + "gene_synonym", + "ECK3873" + ], + [ + "gene_synonym", + "EcoGene:EG11845" + ], + [ + "gene_synonym", + "GI:90111658" + ], + [ + "gene_synonym", + "GeneID:948374" + ], + [ + "gene_synonym", + "JW5569" + ], + [ + "gene_synonym", + "NP_418316.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32140" + ], + [ + "gene_synonym", + "b3880" + ], + [ + "gene_synonym", + "manC?" + ], + [ + "gene_synonym", + "squS" + ], + [ + "gene_synonym", + "yihS" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:948373" + ], + [ + "gene_synonym", + "JW3852" + ], + [ + "gene_synonym", + "NP_418317.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32141" + ], + [ + "gene_synonym", + "b3881" + ], + [ + "gene_synonym", + "squT" + ], + [ + "gene_synonym", + "yihT" + ] + ], + "dna_sequence": 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"90838caf8070bea2226dbb6383a94ca9", + "parent_gene": "", + "protein_md5": "ed29993cf859e7bc56aba9437df4de6f", + "protein_translation": "MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLMQIMGTPQLARILHPFVGVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVGDTGRYNFGQKCVFWAAIIFLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVALIVVIMVHIYAALWVKGTITAMVEGWVTSAWAKKHHPRWYREVRKTTEKKAE", + "protein_translation_length": 211, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012708" + ], + [ + "gene_synonym", + "ECK3886" + ], + [ + "gene_synonym", + "EcoGene:EG11857" + ], + [ + "gene_synonym", + "GI:16131733" + ], + [ + "gene_synonym", + "GeneID:948395" + ], + [ + "gene_synonym", + "JW3864" + ], + [ + "gene_synonym", + "NP_418329.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AAJ5" + ], + [ + "gene_synonym", + "b3893" + ], + [ + "gene_synonym", + "fdoH" + ] + ], + "dna_sequence": "ATGGCTTATCAATCTCAAGATATCATTCGTCGTTCCGCGACTAACGGTCTGACCCCCGCGCCTCAGGCGCGGGACTTCCAGGAAGAAGTGGCGAAACTCATCGACGTTACCACCTGTATCGGCTGTAAAGCCTGTCAGGTGGCGTGTTCAGAGTGGAACGACATTCGCGATACCGTCGGCAATAACATTGGGGTGTACGACAACCCCAATGATTTAAGCGCCAAATCGTGGACGGTAATGCGCTTCTCGGAAGTGGAGCAGAACGACAAACTGGAATGGCTGATCCGCAAAGACGGCTGTATGCACTGTTCCGATCCAGGCTGCCTGAAAGCGTGCCCGGCGGAAGGTGCAATTATTCAGTATGCCAACGGTATCGTCGACTTCCAGTCCGAGCAGTGCATTGGCTGCGGTTATTGCATTGCGGGCTGTCCGTTCGACATTCCGCGCCTCAACCCGGAAGACAACCGCGTCTACAAATGTACGCTGTGCGTTGACCGCGTGGTGGTTGGGCAAGAACCAGCCTGCGTGAAGACCTGCCCAACGGGCGCGATTCACTTCGGTACGAAAGAGTCGATGAAAACGCTGGCGAGCGAGCGCGTTGCTGAGCTGAAAACCCGCGGTTACGACAATGCGGGTCTGTACGATCCGGCAGGCGTCGGTGGTACACACGTCATGTACGTGCTGCACCATGCTGACAAGCCAAATCTGTATCATGGCTTGCCGGAGAACCCGGAAATCAGCGAAACCGTGAAATTCTGGAAAGGCATCTGGAAACCGCTCGCGGCTGTTGGCTTTGCGGCTACCTTTGCGGCCAGTATCTTCCACTACGTGGGTGTCGGTCCGAACCGTGCGGATGAGGAAGAGAATAATCTGCACGAAGAGAAAGACGAGGAGCGCAAATGA", + "dna_sequence_length": 903, + "functions": [ + "formate dehydrogenase-O, Fe-S subunit" + ], 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"b3894" + ], + [ + "gene_synonym", + "fdoG" + ] + ], + "dna_sequence": "ATGCAGGTCAGCAGAAGGCAGTTCTTTAAGATCTGCGCTGGCGGTATGGCAGGCACCACGGCAGCGGCACTGGGTTTTGCACCCAGCGTAGCACTCGCGGAAACCCGGCAGTATAAACTGCTGCGCACCCGCGAAACCCGTAATACCTGCACCTATTGTTCCGTAGGCTGTGGGCTGTTGATGTACAGCCTCGGTGACGGAGCAAAAAACGCCAAAGCATCTATCTTCCATATCGAAGGCGATCCGGATCACCCGGTCAACCGCGGTGCACTTTGTCCGAAAGGCGCTGGCCTGGTGGATTTCATCCACTCCGAAAGCCGTCTGAAGTTTCCGGAATACCGTGCGCCAGGTTCTGATAAATGGCAGCAAATCAGTTGGGAAGAGGCGTTTGATCGCATCGCCAAACTGATGAAAGAAGACCGCGATGCTAACTACATTGCGCAAAACGCCGAAGGCGTGACTGTTAACCGCTGGCTCTCCACCGGGATGCTGTGTGCTTCCGCGTCGAGTAACGAAACCGGCTATTTAACGCAAAAATTCTCCCGCGCGCTGGGTATGCTCGCGGTCGACAACCAGGCGCGTGTCTGACACGGACCAACGGTAGCAAGTCTTGCTCCAACATTTGGTCGCGGTGCGATGACCAACCACTGGGTCGACATCAAGAACGCCAACCTCGTCGTGGTGATGGGCGGTAACGCCGCTGAAGCTCACCCGGTCGGGTTCCGCTGGGCGATGGAAGCCAAAATTCACAACGGCGCGAAGCTGATTGTGATCGATCCTCGCTTTACGCGTACGGCGGCGGTAGCTGACTACTATGCCCCTATTCGTTCCGGTACTGACATTGCTTTCCTGTCAGGCGTATTGCTGTACCTGCTGAACAATGAAAAATTCAACCGCGAATACACCGAAGCCTATACCAACGCCAGCCTGATCGTGCGTGAGGATTACGGCTTTGAAGATGGCCTGTTCACCGGCTACGACGCGGAAAAACGCAAGTACGATAAATCCTCCTGGACTTATGAACTGGACGAAAACGGCTTCGCCAAACGCGATACCACGCTGCAACATCCGCGCTGCGTGTGGAACTTGCTGAAACAGCACGTTTCCCGCTACACGCCAGATGTGGTTGAAAACATCTGTGGTACGCCAAAAGACGCGTTCCTGAAAGTCTGCGAATACATCGCAGAAACCAGTGCTCACGATAAAACTGCCTCGTTCCTGTATGCCCTCGGCTGGACGCAACACTCCGTTGGTGCGCAAAACATTCGTACGATGGCGATGATCCAGCTGCTGCTCGGCAATATGGGGATGGCAGGCGGCGGCGTTAACGCCCTGCGCGGTCACTCCAATATTCAGGGGCTGACGGACCTGGGGCTGCTGTCGCAGAGCCTGCCAGGTTACATGACGCTGCCAAGCGAGAAGCAGACCGATCTGCAAACCTACCTTACCGCCAACACGCCAAAACCGCTGCTGGAAGGCCAGGTAAACTACTGGGGCAACTACCCGAAATTCTTCGTCTCTATGATGAAGGCCTTCTTTGGTGATAAAGCGACGGCGGAAAATAGCTGGGGCTTTGACTGGTTGCCGAAGTGGGATAAAGGCTACGACGTCCTGCAATACTTCGAGATGATGAAAGAGGGCAAGGTCAATGGCTATATCTGCCAGGGCTTTAACCCTGTTGCCTCATTCCCGAACAAAAACAAAGTGATCGGTTGTCTGTCGAAACTGAAGTTCCTCGTCACCATCGACCCACTGAACACTGAAACCTCTAACTTCTGGCAGAACCACGGTGAGCTGAACGAAGTTGACTCGTCGAAGATCCAGACCGAAGTGTTCCGTCTGCCATCGACCTGCTTCGCGGAAGAGAACGGTTCTATCGTTAACTCAGGTCGCTGGTTACAGTGGCACTGGAAAGGTGCGGACGCCCCGGGGATTGCGCTGACTGACGGCGAGATCCTCTCCGGTATCTTCCTGCGCTTGCGCAAGATGTATGCCGAACAGGGTGGCGCGAACCCGGACCAGGTGCTGAACATGACATGGAACTACGCCATTCCGCATGAGCCATCTTCAGAAGAAGTGGCGATGGAGAGCAACGGTAAGGCGCTGGCCGATATTACCGATCCGGCAACCGGTGCGGTTATCGTCAAGAAAGGCCAACAACTTAGTTCGTTCGCCCAATTGCGCGATGACGGTACAACCTCCTGTGGCTGCTGGATTTTCGCCGGTAGCTGGACGCCGGAAGGCAACCAGATGGCACGCCGTGATAACGCCGATCCGTCTGGCCTCGGTAACACGCTGGGCTGGGCATGGGCATGGCCGCTTAACCGCCGCATTCTGTATAACCGCGCCTCCGCAGATCCGCAGGGTAACCCGTGGGATCCGAAGCGTCAGTTGCTGAAATGGGACGGCACTAAGTGGACCGGCTGGGATATTCCGGACTACAGCGCAGCGCCTCCGGGTAGCGGCGTCGGGCCGTTTATCATGCAGCAGGAAGGCATGGGGCGTCTGTTTGCCCTCGATAAGATGGCGGAAGGTCCGTTCCCGGAACACTACGAGCCGTTTGAAACGCCGCTGGGAACTAACCCGCTGCATCCAAACGTTATCTCGAACCCGGCTGCACGTATCTTTAAAGACGACGCCGAAGCATTGGGTAAAGCCGATAAGTTCCCGTATGTCGGAACCACCTATCGTCTGACCGAGCACTTCCACTACTGGACCAAACACGCGCTGTTGAACGCGATTTTGCAGCCAGAGCAGTTTGTGGAAATCGGGGAGTCGCTGGCGAATAAACTTGGCATTGCCCAGGGCGATACCGTGAAAGTCTCCTCCAACCGTGGCTATATCAAAGCCAAAGCGGTGGTGACCAAACGTATTCGCACGCTGAAAGCGAACGGCAAAGATATCGATACCATCGGTATTCCGATTCACTGGGGCTATGAAGGCGTAGCTAAAAAAGGCTTTATTGCCAATACTTTAACGCCATTCGTTGGTGATGCGAACACGCAGACGCCGGAGTTTAAGTCCTTCCTTGTGAATGTGGAAAAGGTGTAA", 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"MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTRETRNTCTYCSVGCGLLMYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFIHSESRLKFPEYRAPGSDKWQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLSTGMLCASASSNETGYLTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWVDIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVADYYAPIRSGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRKYDKSSWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCEYIAETSAHDKTASFLYALGWTQHSVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSNIQGLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSMMKAFFGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKEGKVNGYICQGFNPVASFPNKNKVIGCLSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENGSIVNSGRWLQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNYAIPHEPSSEEVAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIFAGSWTPEGNQMARRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQLLKWDGTKWTGWDIPDYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFETPLGTNPLHPNVISNPAARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAILQPEQFVEIGESLANKLGIAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIGIPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV", + "protein_translation_length": 1016, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012714" + ], + [ + "gene_synonym", + "ECK3888" + ], + [ + "gene_synonym", + "EcoGene:EG11859" + ], + [ + "gene_synonym", + "GI:16131735" + ], + [ + "gene_synonym", + "GeneID:948393" + ], + [ + "gene_synonym", + "JW3866" + ], + [ + "gene_synonym", + "NP_418331.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32177" + ], + [ + "gene_synonym", + "b3895" + ], + [ + "gene_synonym", + "fdhD" + ] + ], + "dna_sequence": "GTGAAAAAAACACAGCGAAAAGAAATCGAAAATGTGACAAATATCACAGGTGTTCGTCAAATTGAGTTATGGCGGCGTGATGATTTACAACACCCACGGTTAGATGAGGTCGCGGAAGAAGTTCCCGTTGCGCTGGTCTACAACGGCATTTCGCATGTGGTGATGATGGCGTCGCCCAAAGACCTTGAGTACTTTGCGCTCGGTTTTTCGCTTTCCGAGGGGATTATCGAAAGTCCGCGCGATATCTTCGGCATGGATGTCGTTCCTTCCTGTAATGGTCTTGAAGTACAAATTGAGCTTTCCAGCCGCCGCTTTATGGGGTTGAAGGAGCGCCGCCGGGCGCTGGCGGGACGTACGGGCTGTGGCGTATGCGGCGTGGAGCAACTTAATGACATCGGAAAACCGGTGCAGCCGCTACCGTTCACCCAGACGTTTGATCTCAACAAACTGGATGATGCATTACGTCATCTCAACGATTTTCAGCCAGTGGGGCAACTGACTGGTTGTACTCACGCCGCTGCCTGGATGTTGCCATCTGGCGAACTGGTCGGCGGGCATGAAGACGTGGGTCGCCATGTGGCGCTGGACAAACTGTTAGGCCGCCGGTCACAAGAAGGGGAAAGCTGGCAGCAAGGTGCGGTACTGGTTTCCAGTCGTGCCAGTTATGAAATGGTGCAAAAGTCGGCGATGTGCGGCGTAGAGATTTTGTTTGCGGTGTCTGCCGCGACCACGCTTGCTGTAGAAGTGGCTGAGCGCTGTAATCTGACACTGGTAGGTTTTTGTAAACCGGGTCGGGCAACGGTTTATACCCATCCGCAGCGTTTGAGCAATTAA", + "dna_sequence_length": 834, + "functions": [ + "formate dehydrogenase formation protein" + ], + "id": "CDS_3824", + "location": [ + [ + "NC_000913", + 4086016, 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"ATGAAAAGGAATTTATTATCTTCCGCTATTATAGTCGCCATCATGTCCCTCGGTCTGACGGGTTGTGATGATAAAAAAGCCGAAACAGAAACGCTCCCGCCTGCCAATAGTCAACCTGCCGCACCAGCTCCTGAAGCGAAACCTACTGAAGCTCCCGTTGCAAAAGCAGAAGCTAAACCTGAAACACCTGCGCAACCGGTGGTCGATGAACAAGCGGTTTTCGACGAAAAAATGGATGTCTATATCAAGTGCTACAACAAGTTACAGATCCCGGTACAGCGCAGTCTGGCGCGTTATGCTGACTGGCTGAAAGATTTTAAACAGGGGCCTACCGGTGAAGAGCGTACTGTTTATGGCATCTACGGCATTAGTGAATCCAACCTCGCTGAGTGTGAAAAAGGCGTAAAAAGTGCTGTGGCGTTAACGCCTGCGCTGCAACCAATTGATGGCGTGGCGGTGAGTTATATCGATGCTGCCGTGGCGTTGGGTAATACCATTAACGAAATGGATAAATATTACACCCAGGAAAATTATAAAGACGATGCGTTTGCGAAAGGGAAAACGCTGCACCAGACATTCTTAAAAAATCTGGAAGCCTTTGAACCTGTAGCCGAATCTTATCATGCGGCGATTCAGGAAATTAATGATAAGCGTCAGCTTGCGGAACTGAAAAATATTGAAGAAAGAGAAGGGAAAACATTCCACTACTACTCTCTGGCAGTCATGATTTCAGCGAAACAAATTAATAACCTGATATCGCAAGATAAGTTTGATGCAGAAGCGGCAATGAAGAAAGTGTCTGAACTGGAAACGCTAGTGGCGCAGGCCAAAGAAGCGGATAAAGGCGGCATGAATTTCTCGTTTATTAATTCGGCAGGCCAGTATCAACTCGAGGCTAAAAAATACGTTCGCCGCATCAGAGATAAAGTCCCGTACTCTGACTGGGATAAAGAGCAACTTCAGGACGCAAACTCAAGCTGGATGGTCGAAGACTCTTTCCCGAGAGCATTACGCGAGTACAACGAAATGGTTGATGACTATAATAGCCTGCGTTAA", 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"JW3868" + ], + [ + "gene_synonym", + "NP_418333.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32152" + ], + [ + "gene_synonym", + "b3897" + ], + [ + "gene_synonym", + "frvR" + ], + [ + "gene_synonym", + "yiiH" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG11864" + ], + [ + "gene_synonym", + "GI:16131740" + ], + [ + "gene_synonym", + "GeneID:948391" + ], + [ + "gene_synonym", + "JW3871" + ], + [ + "gene_synonym", + "NP_418336.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32155" + ], + [ + "gene_synonym", + "b3900" + ], + [ + "gene_synonym", + "frvA" + ], + [ + "gene_synonym", + "yiiK" + ] + ], + "dna_sequence": "ATGGCAGCTCTTACTGCAAGCTGTATTGACCTGAATATTCAGGGCAATGGCGCTTATTCCGTTCTGAAGCAGTTGGCGACAATAGCGTTACAAAACGGTTTTATCACCGACTCACACCAGTTCCTGCAAACCCTGCTGCTGCGCGAAAAAATGCACTCTACTGGATTTGGTTCCGGTGTCGCCGTGCCGCACGGTAAAAGCGCCTGCGTTAAACAACCGTTCGTATTATTCGCCCGCAAAGCGCAGGCTATTGACTGGAAAGCCAGCGATGGCGAAGACGTCAATTGCTGGATCTGCCTCGGCGTGCCGCAAAGCGGCGAAGAGGATCAGGTCAAAATCATCGGCACACTGTGTCGCAAAATTATTCACAAGGAATTTATTCATCAACTGCAACAGGGCGATACCGACCAGGTGCTTGCCTTGTTAAATCAAACCCTCAGCTCATAA", + "dna_sequence_length": 447, + "functions": [ + "putative enzyme IIA component of PTS" + ], + "id": "CDS_3829", + "location": [ + [ + "NC_000913", + 4092823, + "-", + 447 + ] + ], + "md5": "a5e58f8d466cd41e7a80543623bcbab8", + "parent_gene": "", + "protein_md5": "c0e068ab23a6c7d07365f41705a9471c", + "protein_translation": "MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQTLLLREKMHSTGFGSGVAVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICLGVPQSGEEDQVKIIGTLCRKIIHKEFIHQLQQGDTDQVLALLNQTLSS", + "protein_translation_length": 148, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012729" + ], + [ + "gene_synonym", + "ECK3894" + ], + [ + "gene_synonym", + "EcoGene:EG11865" + ], + [ + "gene_synonym", + "GI:16131741" + ], + [ + "gene_synonym", + "GeneID:948402" + ], + [ + "gene_synonym", + "JW3872" + ], + [ + "gene_synonym", + "NP_418337.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32156" + ], + [ + "gene_synonym", + "b3901" + ], + [ + "gene_synonym", + "rhaM" + ], + [ + "gene_synonym", + "yiiL" + ] + ], + "dna_sequence": "ATGATCCGCAAAGCCTTTGTCATGCAGGTAAACCCCGACGCCCACGAAGAGTATCAGCGTCGGCATAATCCCATCTGGCCAGAACTGGAAGCAGTGCTGAAATCTCACGGTGCGCATAACTACGCCATCTATCTCGACAAAGCGCGTAATCTGCTGTTTGCCATGGTAGAGATTGAATCTGAAGAACGCTGGAATGCGGTTGCCAGCACTGATGTTTGCCAACGTTGGTGGAAATATATGACCGATGTTATGCCCGCTAACCCGGATAACAGCCCGGTGAGTAGCGAGCTGCAAGAAGTGTTTTACCTGCCGTAA", + "dna_sequence_length": 315, + "functions": [ + "L-rhamnose mutarotase" + ], + "id": "CDS_3830", + "location": [ + [ + "NC_000913", + 4093438, + "-", + 315 + ] + ], + "md5": "79e0d4fb3301dc60cb8742003e1545f0", + "parent_gene": "", + "protein_md5": "57a2292d55fc3b2bb2b01c9726349348", + "protein_translation": "MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIYLDKARNLLFAMVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSELQEVFYLP", + "protein_translation_length": 104, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012731" + ], + [ + "gene_synonym", + "ECK3895" + ], + [ + "gene_synonym", + "EcoGene:EG11866" + ], + [ + "gene_synonym", + "GI:16131742" + ], + [ + "gene_synonym", + "GeneID:948401" + ], + [ + "gene_synonym", + "JW3873" + ], + [ + "gene_synonym", + "NP_418338.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32169" + ], + [ + "gene_synonym", + "b3902" + ], + [ + "gene_synonym", + "rhaD" + ] + ], + "dna_sequence": 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"ATGACCACTCAACTGGAACAGGCCTGGGAGCTAGCGAAACAGCGTTTCGCGGCGGTGGGGATTGATGTCGAGGAGGCGCTGCGCCAACTTGATCGTTTACCCGTTTCAATGCACTGCTGGCAGGGCGATGATGTTTCCGGTTTTGAAAACCCGGAAGGTTCGCTGACCGGGGGGATTCAGGCCACAGGCAATTATCCGGGCAAAGCGCGTAATGCCAGTGAGCTACGTGCCGATCTGGAACAGGCTATGCGGCTGATTCCGGGGCCGAAACGGCTTAATTTACATGCCATCTATCTGGAATCAGATACGCCAGTCTCGCGCGACCAGATCAAACCAGAGCACTTCAAAAACTGGGTTGAATGGGCGAAAGCCAATCAGCTCGGTCTGGATTTTAACCCCTCCTGCTTTTCGCATCCGCTAAGCGCCGATGGCTTTACGCTTTCCCATGCCGACGACAGCATTCGCCAGTTCTGGATTGATCACTGCAAAGCCAGCCGTCGCGTTTCGGCCTATTTTGGCGAGCAACTCGGCACACCATCGGTGATGAACATCTGGATCCCGGATGGTATGAAAGATATCACCGTTGACCGTCTCGCCCCGCGTCAGCGTCTGCTGGCAGCACTGGATGAGGTGATCAGCGAGAAGCTAAACCCTGCGCACCATATCGACGCCGTTGAGAGCAAATTGTTTGGCATTGGCGCAGAGAGCTACACGGTTGGCTCCAATGAGTTTTACATGGGGTATGCCACCAGCCGCCAGACTGCGCTGTGCCTGGACGCCGGGCACTTCCACCCGACTGAAGTGATTTCCGACAAGATTTCCGCCGCCATGCTGTATGTGCCGCAGTTGCTGCTGCACGTCAGCCGTCCGGTTCGCTGGGACAGCGATCACGTAGTGCTGCTGGATGATGAAACCCAGGCAATTGCCAGTGAGATTGTGCGTCACGATCTGTTTGACCGGGTGCATATCGGCCTTGACTTCTTCGATGCCTCTATCAACCGCATTGCCGCGTGGGTCATTGGTACACGCAATATGAAAAAAGCCCTGCTGCGTGCGTTGCTGGAACCTACCGCTGAGCTGCGCAAGCTGGAAGCGGCGGGCGATTACACTGCGCGTCTGGCACTGCTGGAAGAGCAGAAATCGTTGCCGTGGCAGGCGGTCTGGGAAATGTATTGCCAACGTCACGATACGCCAGCAGGTAGCGAATGGCTGGAGAGCGTGCGGGCTTATGAGAAAGAAATTTTGAGTCGCCGCGGGTAA", 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"gene_synonym", + "GeneID:948399" + ], + [ + "gene_synonym", + "JW3875" + ], + [ + "gene_synonym", + "NP_418340.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32171" + ], + [ + "gene_synonym", + "b3904" + ], + [ + "gene_synonym", + "rhaB" + ] + ], + "dna_sequence": 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], + "id": "CDS_3871", + "location": [ + [ + "NC_000913", + 4136108, + "+", + 906 + ] + ], + "md5": "fa40e60c97dcc23abda3b3429eb0c05a", + "parent_gene": "", + "protein_md5": "ee33b1f96fbb9fc32c120416e947a427", + "protein_translation": "MSAAGKSNPLAISGLVVLTLIWSYSWIFMKQVTSYIGAFDFTALRCIFGALVLFIVLLLRGRGMRPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILSGVSWGASAIVAKRLYARHPRVDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGSGIVLIVLALALVSRKKKEAVSVKRI", + "protein_translation_length": 301, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012908" + ], + [ + "gene_synonym", + "ECK3936" + ], + [ + "gene_synonym", + "EcoGene:EG11903" + ], + [ + "gene_synonym", + "GI:16131782" + ], + [ + "gene_synonym", + "GeneID:948441" + ], + [ + "gene_synonym", + "JW3916" + ], + [ + "gene_synonym", + "NP_418379.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32668" + ], + [ + "gene_synonym", 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"protein_translation": "MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFAEYPQKWKLKRPDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYFVK", + "protein_translation_length": 205, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012912" + ], + [ + "gene_synonym", + "ECK3937" + ], + [ + "gene_synonym", + "EcoGene:EG11904" + ], + [ + "gene_synonym", + "GI:90111668" + ], + [ + "gene_synonym", + "GeneID:948440" + ], + [ + "gene_synonym", + "JW5556" + ], + [ + "gene_synonym", + "NP_418380.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9S5" + ], + [ + "gene_synonym", + "b3945" + ], + [ + "gene_synonym", + "gldA" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:948439" + ], + [ + "gene_synonym", + "JW3918" + ], + [ + "gene_synonym", + "NP_418381.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32669" + ], + [ + "gene_synonym", + "b3946" + ], + [ + "gene_synonym", + "fsaB" + ], + [ + "gene_synonym", + "talC" + ], + [ + "gene_synonym", + "yijG" + ] + ], + "dna_sequence": "ATGGAACTGTATCTGGACACCGCTAACGTCGCAGAAGTCGAACGTCTGGCACGCATATTCCCCATTGCCGGGGTGACAACTAACCCGAGCATTATCGCTGCCAGCAAGGAGTCCATATGGGAAGTGCTGCCGCGTCTGCAAAAAGCGATTGGTGATGAGGGCATTCTGTTTGCTCAGACCATGAGCCGCGACGCGCAGGGGATGGTGGAAGAAGCGAAGCGCCTGCGCGACGCTATTCCGGGTATTGTGGTGAAAATCCCGGTGACTTCCGAAGGTCTGGCAGCAATTAAAATACTGAAAAAAGAGGGTATTACTACACTTGGCACTGCTGTATATAGCGCCGCACAAGGGTTATTAGCCGCACTGGCAGGGGCAAAATACGTTGCTCCGTATGTTAACCGCGTAGATGCCCAGGGCGGAGACGGCATTCGTACGGTTCAGGAGCTGCAAACGCTGTTAGAAATGCACGCGCCAGAAAGCATGGTGCTGGCAGCCAGCTTTAAAACGCCGCGTCAGGCGCTGGACTGTTTACTGGCAGGATGTGAATCCATCACCCTGCCCTTAGATGTAGCGCAACAAATGCTCAACACCCCTGCGGTAGAGTCAGCTATAGAGAAGTTCGAACACGACTGGAATGCCGCATTTGGCACTACTCATCTCTAA", + "dna_sequence_length": 663, + "functions": [ + "fructose-6-phosphate aldolase 2" + ], + "id": "CDS_3874", + "location": [ + [ + "NC_000913", + 4139708, + "-", + 663 + ] + ], + "md5": "e37b82ccad182f45326d422587a51f6e", + "parent_gene": "", + "protein_md5": "bfabdd738cc4915d44ddb8814cf74056", + "protein_translation": "MELYLDTANVAEVERLARIFPIAGVTTNPSIIAASKESIWEVLPRLQKAIGDEGILFAQTMSRDAQGMVEEAKRLRDAIPGIVVKIPVTSEGLAAIKILKKEGITTLGTAVYSAAQGLLAALAGAKYVAPYVNRVDAQGGDGIRTVQELQTLLEMHAPESMVLAASFKTPRQALDCLLAGCESITLPLDVAQQMLNTPAVESAIEKFEHDWNAAFGTTHL", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012920" + ], + [ + "gene_synonym", + "ECK3939" + ], + [ + "gene_synonym", + "EcoGene:EG11906" + ], + [ + "gene_synonym", + "GI:49176446" + ], + [ + "gene_synonym", + "GeneID:948437" + ], + [ + "gene_synonym", + "JW5555" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32670" + ], + [ + "gene_synonym", + "YP_026278.1" + ], + [ + "gene_synonym", + "b3947" + ], + [ + "gene_synonym", + "frwA" + ], + [ + "gene_synonym", + "ptsA" + ], + [ + "gene_synonym", + "yijH" + ] + ], + "dna_sequence": "ATGGCCCTGATTGTGGAATTTATTTGTGAGCTACCTAACGGCGTACATGCGCGTCCGGCAAGCCACGTTGAAACGCTGTGTAATACTTTTTCATCACAAATTGAGTGGCATAACCTGCGCACTGACCGCAAGGGCAACGCCAAAAGCGCCCTTGCGCTGATTGGCACCGATACGCTGGCGGGCGATAACTGCCAGTTACTGATTTCCGGGGCCGACGAACAGGAAGCGCACCAGCGTTTAAGCCAATGGCTGCGCGATGAATTCCCCCACTGCGATGCGCCGCTGGCGGAAGTTAAATCTGACGAACTGGAACCACTGCCGGTTTCACTGACCAATCTGAATCCGCAAATTATCCGCGCCCGCACCGTGTGCAGCGGTAGTGCAGGCGGCATTCTGACGCCGATCTCTTCTTTAGATCTCAATGCGCTGGGTAATCTTCCCGCAGCCAAAGGCGTTGACGCCGAGCAATCCGCACTGGAAAACGGCCTGACGCTGGTACTGAAAAACATTGAGTTTCGTCTGCTGGATAGCGACGGTGCTACCAGCGCGATTCTGGAAGCTCACCGATCCCTGGCTGGCGATACTTCCCTGCGCGAACATTTACTGGCAGGCGTCAGCGCCGGATTAAGCTGCGCCGAAGCAATTGTTGCCAGCGCGAATCACTTTTGCGAAGAGTTTTCCCGTTCCAGCAGCAGCTACCTGCAAGAACGTGCCCTGGACGTACGCGACGTCTGCTTCCAGTTACTCCAGCAAATCTACGGTGAGCAACGCTTCCCGGCACCGGGCAAACTGACGCAGCCCGCCATTTGTATGGCTGATGAACTGACCCCCAGCCAGTTCCTCGAACTGGATAAAAATCACCTCAAAGGATTGTTGCTCAAAAGCGGCGGCACCACCTCACATACGGTGATCCTTGCCCGTTCGTTCAACATTCCAACGCTGGTTGGTGTGGATATTGATGCCCTTACTCCGTGGCAGCAACAAACGATTTATATCGACGGCAACGCCGGGGCGATTGTGGTTGAGCCAGGGGAAGCCGTAGCTCGTTATTATCAGCAAGAAGCCCGCGTACAGGACGCCCTGCGTGAGCAACAGCGTGTCTGGCTGACCCAACAAGCCCGTACCGCTGACGGTATCCGCATTGAAATTGCCGCTAACATCGCTCACTCCGTGGAAGCGCAGGCCGCATTCGGCAATGGTGCGGAAGGCGTTGGTTTGTTCCGCACTGAAATGCTCTATATGGATCGCACCAGCGCACCGGGCGAAAGCGAGTTGTACAACATTTTTTGTCAGGCGCTGGAATCCGCCAACGGACGCAGCATTATTGTGCGCACTATGGACATTGGCGGCGACAAACCCGTTGATTATCTGAACATTCCCGCAGAGGCAAACCCGTTCCTCGGTTATCGCGCCGTGCGTATTTATGAAGAGTACGCGTCGTTGTTTACCACGCAGCTACGGTCGATCCTCCGCGCCTCCGCTCACGGCAGCCTGAAAATCATGATCCCGATGATCTCCTCAATGGAAGAGATCTTATGGGTGAAAGAAAAACTGGCGGAAGCCAAACAGCAACTACGTAACGAACACATTCCGTTTGATGAGAAAATCCAGCTCGGCATCATGCTGGAAGTGCCGTCGGTGATGTTCATCATCGATCAATGCTGCGAAGAGATTGATTTCTTTAGTATTGGTAGTAATGACCTGACGCAGTATCTGCTGGCGGTGGATCGCGATAACGCTAAGGTTACTCGTCACTACAACAGCCTGAATCCGGCATTCTTGCGGGCGCTCGATTACGCCGTGCAAGCGGTGCATCGCCAGGGCAAATGGATTGGTCTGTGCGGTGAGCTGGGAGCGAAAGGTTCCGTGCTGCCGTTGCTGGTCGGCTTAGGGCTGGATGAACTCAGCATGAGCGCACCATCAATTCCGGCGGCGAAAGCTCGGATGGCGCAACTTGATAGCCGTGAGTGCCGCAAGTTGCTCAACCAGGCAATGGCCTGCCGTACTTCGCTGGAAGTAGAACACCTGCTGGCGCAATTCCGCATGACCCAACAAGACGCACCGCTGGTCACCGCCGAGTGCATCACACTGGAAAGCGACTGGCGCAGCAAAGAAGAAGTGCTCAAAGGCATGACCGATAACCTGCTGCTGGCGGGCCGCTGCCGCTATCCGCGTAAACTGGAAGCCGACTTGTGGGCGCGCGAGGCCGTTTTCTCTACCGGTCTGGGCTTTAGTTTTGCCATTCCACACAGCAAATCAGAACACATTGAGCAATCCACCATCAGCGTGGCGCGTCTGCAAGCGCCGGTGCGCTGGGGCGATGATGAAGCGCAATTCATCATTATGTTAACCCTGAACAAACACGCTGCGGGCGATCAGCATATGCGCATTTTCTCGCGCCTCGCTCGCCGCATCATGCACGAAGAATTCCGTAACGCGCTGGTTAACGCCGCCTCTGCCGACGCTATCGCCAGCCTGCTGCAACATGAACTGGAACTGTAA", 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"MALIVEFICELPNGVHARPASHVETLCNTFSSQIEWHNLRTDRKGNAKSALALIGTDTLAGDNCQLLISGADEQEAHQRLSQWLRDEFPHCDAPLAEVKSDELEPLPVSLTNLNPQIIRARTVCSGSAGGILTPISSLDLNALGNLPAAKGVDAEQSALENGLTLVLKNIEFRLLDSDGATSAILEAHRSLAGDTSLREHLLAGVSAGLSCAEAIVASANHFCEEFSRSSSSYLQERALDVRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELTPSQFLELDKNHLKGLLLKSGGTTSHTVILARSFNIPTLVGVDIDALTPWQQQTIYIDGNAGAIVVEPGEAVARYYQQEARVQDALREQQRVWLTQQARTADGIRIEIAANIAHSVEAQAAFGNGAEGVGLFRTEMLYMDRTSAPGESELYNIFCQALESANGRSIIVRTMDIGGDKPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQLRSILRASAHGSLKIMIPMISSMEEILWVKEKLAEAKQQLRNEHIPFDEKIQLGIMLEVPSVMFIIDQCCEEIDFFSIGSNDLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQAVHRQGKWIGLCGELGAKGSVLPLLVGLGLDELSMSAPSIPAAKARMAQLDSRECRKLLNQAMACRTSLEVEHLLAQFRMTQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCRYPRKLEADLWAREAVFSTGLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFIIMLTLNKHAAGDQHMRIFSRLARRIMHEEFRNALVNAASADAIASLLQHELEL", + "protein_translation_length": 833, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012928" + ], + [ + "gene_synonym", + "ECK3940" + ], 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"gene_synonym", + "JW5553" + ], + [ + "gene_synonym", + "NP_418394.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A6C8" + ], + [ + "gene_synonym", + "argB" + ], + [ + "gene_synonym", + "b3959" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16131799" + ], + [ + "gene_synonym", + "GeneID:948462" + ], + [ + "gene_synonym", + "JW3933" + ], + [ + "gene_synonym", + "NP_418396.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACQ4" + ], + [ + "gene_synonym", + "b3961" + ], + [ + "gene_synonym", + "momR" + ], + [ + "gene_synonym", + "mor" + ], + [ + "gene_synonym", + "oxyR" + ] + ], + "dna_sequence": 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stress transcriptional regulator" + ], + "id": "CDS_3888", + "location": [ + [ + "NC_000913", + 4158490, + "+", + 918 + ] + ], + "md5": "6d88aaf9634c171d7d9e840892cde87f", + "parent_gene": "", + "protein_md5": "01f7ef453121c0bb818ead6a5da9a2b6", + "protein_translation": "MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAGMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANRECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLLPALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDGHFDKVLKQAV", + "protein_translation_length": 305, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012975" + ], + [ + "gene_synonym", + "ECK3954" + ], + [ + "gene_synonym", + "EcoGene:EG11428" + ], + [ + "gene_synonym", + "GI:90111670" + ], + [ + "gene_synonym", + "GeneID:948461" + ], + [ + "gene_synonym", + "JW5551" + ], + [ + "gene_synonym", + "NP_418397.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27306" + ], + [ + "gene_synonym", + "b3962" + ], + [ + "gene_synonym", + "sth" + ], + [ + "gene_synonym", + "sthA" + ], + [ + "gene_synonym", + "udhA" + ] + ], + "dna_sequence": 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"EcoGene:EG11394" + ], + [ + "gene_synonym", + "GI:145698338" + ], + [ + "gene_synonym", + "GeneID:948460" + ], + [ + "gene_synonym", + "JW3935" + ], + [ + "gene_synonym", + "NP_418398.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACU5" + ], + [ + "gene_synonym", + "b3963" + ], + [ + "gene_synonym", + "fabR" + ], + [ + "gene_synonym", + "yijC" + ] + ], + "dna_sequence": 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"MGVRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGIAPTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGNNPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVTIVFSAGAEALDVGVEQRRQLEERLVLQLRMISKGAYYWYRREQEKTAIIPGNVKDE", + "protein_translation_length": 215, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012981" + ], + [ + "gene_synonym", + "ECK3956" + ], + [ + "gene_synonym", + "EcoGene:EG11395" + ], + [ + "gene_synonym", + "GI:16131802" + ], + [ + "gene_synonym", + "GeneID:948459" + ], + [ + "gene_synonym", + "JW3936" + ], + [ + "gene_synonym", + "NP_418399.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF40" + ], + [ + "gene_synonym", + "b3964" + ], + [ + "gene_synonym", + "yijD" + ] + ], + "dna_sequence": "ATGAAACAAGCAAATCAAGATAGAGGTACGCTGCTGCTGGCGTTAGTTGCTGGCTTATCGATTAATGGTACTTTCGCAGCGCTGTTTAGCTCCATTGTGCCATTTTCTGTATTCCCGATTATTTCCCTGGTGCTGACGGTTTACTGCCTGCATCAACGTTATCTTAATCGCACTATGCCGGTAGGCTTGCCGGGTCTGGCAGCTGCCTGTTTTATTCTCGGCGTACTGCTGTACAGCACGGTAGTTCGTGCGGAATATCCGGATATCGGCTCTAACTTCTTCCCGGCAGTACTCTCCGTCATTATGGTGTTCTGGATTGGCGCGAAGATGCGTAACCGTAAGCAGGAAGTTGCTGAGTAA", + "dna_sequence_length": 360, + "functions": [ + "DUF1422 family inner membrane protein" + ], + "id": "CDS_3891", + "location": [ + [ + "NC_000913", + 4161771, + "+", + 360 + ] + ], + "md5": "34dbf983352888e1154eb4dcba8e2f27", + "parent_gene": "", + "protein_md5": "2f6db36b7105d20f193c42038f4a3b07", + "protein_translation": "MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLVLTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIMVFWIGAKMRNRKQEVAE", + "protein_translation_length": 119, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012983" + ], + [ + "gene_synonym", + "ECK3957" + ], + [ + "gene_synonym", + "EcoGene:EG11022" + ], + [ + "gene_synonym", + "GI:16131803" + ], + [ + "gene_synonym", + "GeneID:947143" + ], + [ + "gene_synonym", + "JW3937" + ], + [ + "gene_synonym", + "NP_418400.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23003" + ], + [ + "gene_synonym", + "b3965" + ], + [ + "gene_synonym", + "rumT" + ], + [ + "gene_synonym", + "trmA" + ] + ], + "dna_sequence": "ATGACCCCCGAACACCTTCCAACAGAACAGTATGAAGCGCAGTTAGCCGAAAAAGTGGTACGTTTGCAAAGTATGATGGCACCGTTTTCTGACCTGGTTCCGGAAGTGTTTCGCTCGCCGGTCAGTCATTACCGGATGCGCGCGGAGTTCCGCATCTGGCACGATGGCGATGACCTGTATCACATCATTTTCGATCAACAAACCAAAAGCCGCATCCGCGTGGATAGCTTCCCCGCCGCCAGTGAACTTATCAACCAGTTGATGACGGCGATGATTGCGGGTGTGCGTAATAATCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCGGAGGCCCTGCGCGATGCACTGCGCGCGCAGAATCTGAATGTGCATCTGATTGGTCGGGCAACGAAAACCAAAATCGAGCTGGATCAGGATTACATCGATGAACGTCTGCCGGTCGCAGGGAAAGAGATGATCTACCGTCAGGTAGAAAACAGCTTTACCCAGCCGAACGCGGCGATGAATATTCAGATGCTGGAATGGGCGCTGGACGTAACCAAAGGCTCAAAAGGCGATTTACTGGAGCTGTACTGCGGCAACGGTAACTTTTCATTAGCGCTGGCGCGTAATTTTGATCGGGTATTAGCCACCGAAATCGCTAAGCCGTCGGTTGCTGCTGCGCAATACAACATCGCAGCTAACCATATTGATAACGTACAAATTATTCGTATGGCGGCAGAAGAATTTACTCAGGCGATGAATGGTGTGCGCGAGTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTATCCGCGTATTTTGTACATCTCCTGTAACCCGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGCTCTGTTTGATCAGTTCCCCTACACGCACCATATGGAGTGCGGCGTATTACTGACCGCGAAGTAA", 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[ + "gene_synonym", + "GeneID:948468" + ], + [ + "gene_synonym", + "JW3938" + ], + [ + "gene_synonym", + "NP_418401.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P06129" + ], + [ + "gene_synonym", + "b3966" + ], + [ + "gene_synonym", + "bfe" + ], + [ + "gene_synonym", + "btuB" + ], + [ + "gene_synonym", + "cer" + ], + [ + "gene_synonym", + "dcrC" + ] + ], + "dna_sequence": "ATGATTAAAAAAGCTTCGCTGCTGACGGCGTGTTCCGTCACGGCATTTTCCGCTTGGGCACAGGATACCAGCCCGGATACTCTCGTCGTTACTGCTAACCGTTTTGAACAGCCGCGCAGCACTGTGCTTGCACCAACCACCGTTGTGACCCGTCAGGATATCGACCGCTGGCAGTCGACCTCGGTCAATGATGTGCTGCGCCGTCTTCCGGGCGTCGATATCACCCAAAACGGCGGTTCAGGTCAGCTCTCATCTATTTTTATTCGCGGTACAAATGCCAGTCATGTGTTGGTGTTAATTGATGGCGTACGCCTGAATCTGGCGGGGGTGAGTGGTTCTGCCGACCTTAGCCAGTTCCCTATTGCGCTTGTCCAGCGTGTTGAATATATCCGTGGGCCGCGCTCCGCTGTTTATGGTTCCGATGCAATAGGCGGGGTGGTGAATATCATCACGACGCGCGATGAACCCGGAACGGAAATTTCAGCAGGGTGGGGAAGCAATAGTTATCAGAACTATGATGTCTCTACGCAGCAACAACTGGGGGATAAGACACGGGTAACGCTGTTGGGCGATTATGCCCATACTCATGGTTATGATGTTGTTGCCTATGGTAATACCGGAACGCAAGCGCAGACAGATAACGATGGTTTTTTAAGTAAAACGCTTTATGGCGCGCTGGAGCATAACTTTACTGATGCCTGGAGCGGCTTTGTGCGCGGCTATGGCTATGATAACCGTACCAATTATGACGCGTATTATTCTCCCGGTTCACCGTTGCTCGATACCCGTAAACTCTATAGCCAAAGTTGGGACGCCGGGCTGCGCTATAACGGCGAACTGATTAAATCACAACTCATTACCAGCTATAGCCATAGCAAAGATTACAACTACGATCCCCATTATGGTCGTTATGATTCGTCGGCGACGCTCGATGAGATGAAGCAATACACCGTCCAGTGGGCAAACAATGTCATCGTTGGTCACGGTAGTATTGGTGCGGGTGTCGACTGGCAGAAACAGACTACGACGCCGGGTACAGGTTATGTTGAGGATGGATATGATCAACGTAATACCGGCATCTATCTGACCGGGCTGCAACAAGTCGGCGATTTTACCTTTGAAGGCGCAGCACGCAGTGACGATAACTCACAGTTTGGTCGTCATGGAACCTGGCAAACCAGCGCCGGTTGGGAATTCATCGAAGGTTATCGCTTCATTGCTTCCTACGGGACATCTTATAAGGCACCAAATCTGGGGCAACTGTATGGCTTCTACGGAAATCCGAATCTGGACCCGGAGAAAAGCAAACAGTGGGAAGGCGCGTTTGAAGGCTTAACCGCTGGGGTGAACTGGCGTATTTCCGGATATCGTAACGATGTCAGTGACTTGATCGATTATGATGATCACACCCTGAAATATTACAACGAAGGGAAAGCGCGGATTAAGGGCGTCGAGGCGACCGCCAATTTTGATACCGGACCACTGACGCATACTGTGAGTTATGATTATGTCGATGCGCGCAATGCGATTACCGACACGCCGTTGTTACGCCGTGCTAAACAGCAGGTGAAATACCAGCTCGACTGGCAGTTGTATGACTTCGACTGGGGTATTACTTATCAGTATTTAGGCACTCGCTATGATAAGGATTACTCATCTTATCCTTATCAAACCGTTAAAATGGGCGGTGTGAGCTTGTGGGATCTTGCGGTTGCGTATCCGGTCACCTCTCACCTGACAGTTCGTGGTAAAATAGCCAACCTGTTCGACAAAGATTATGAGACAGTCTATGGCTACCAAACTGCAGGACGGGAATACACCTTGTCTGGCAGCTACACCTTCTGA", 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"type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012989" + ], + [ + "gene_synonym", + "ECK3959" + ], + [ + "gene_synonym", + "EcoGene:EG11204" + ], + [ + "gene_synonym", + "GI:90111671" + ], + [ + "gene_synonym", + "GeneID:948467" + ], + [ + "gene_synonym", + "JW5550" + ], + [ + "gene_synonym", + "NP_418402.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P22634" + ], + [ + "gene_synonym", + "b3967" + ], + [ + "gene_synonym", + "dga" + ], + [ + "gene_synonym", + "glr" + ], + [ + "gene_synonym", + "murI" + ], + [ + "gene_synonym", + "yijA" + ] + ], + "dna_sequence": "ATGGCTACCAAACTGCAGGACGGGAATACACCTTGTCTGGCAGCTACACCTTCTGAACCACGTCCCACCGTGCTGGTGTTTGACTCCGGCGTCGGTGGGTTGTCGGTCTATGACGAGATCCGGCATCTCTTACCGGATCTCCATTACATTTATGCTTTCGATAACGTCGCTTTCCCGTATGGCGAAAAAAGCGAAGCGTTTATTGTTGAGCGAGTGGTGGCAATTGTCACCGCGGTGCAAGAACGTTATCCCCTTGCGCTGGCTGTGGTCGCTTGCAACACTGCCAGTACCGTTTCACTTCCTGCATTACGCGAAAAGTTCGACTTCCCGGTTGTTGGTGTCGTGCCGGCGATTAAACCTGCTGCACGTCTGACGGCAAATGGCATTGTCGGATTACTGGCAACCCGCGGAACAGTTAAACGTTCTTATACTCATGAGCTGATCGCGCGTTTCGCTAATGAATGCCAGATAGAAATGCTGGGCTCGGCAGAGATGGTTGAGTTGGCTGAAGCGAAGCTACATGGCGAAGATGTTTCTCTGGATGCACTAAAACGTATCCTACGCCCGTGGTTAAGAATGAAAGAGCCGCCAGATACCGTTGTATTGGGTTGCACCCATTTCCCTCTACTACAAGAAGAACTGTTACAAGTGCTGCCAGAGGGAACCCGGCTGGTGGATTCTGGCGCAGCGATTGCTCGCCGAACGGCCTGGTTGTTAGAACATGAAGCCCCGGATGCAAAATCTGCCGATGCGAATATTGCCTTTTGTATGGCAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGA", + "dna_sequence_length": 858, + "functions": [ + "glutamate racemase" + ], + "id": "CDS_3894", + "location": [ + [ + "NC_000913", + 4165428, + "+", + 858 + ] + ], + "md5": "4608be4221a1508de52f850f9857b32a", + "parent_gene": "", + "protein_md5": "491082b44bf46a95668a6816713fc15d", + "protein_translation": "MATKLQDGNTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYPLALAVVACNTASTVSLPALREKFDFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPGAEQLLPVLQRYGFETLEKLAVLG", + "protein_translation_length": 285, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0012999" + ], + [ + "gene_synonym", + "ECK3964" + ], + [ + "gene_synonym", + "EcoGene:EG11205" + ], + [ + "gene_synonym", + "GI:16131806" + ], + [ + "gene_synonym", + "GeneID:948470" + ], + [ + "gene_synonym", + "JW3940" + ], + [ + "gene_synonym", + "NP_418403.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08373" + ], + [ + "gene_synonym", + "b3972" + ], + [ + "gene_synonym", + "murB" + ], + [ + "gene_synonym", + 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"protein_translation_length": 165, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013038" + ], + [ + "gene_synonym", + "ECK3977" + ], + [ + "gene_synonym", + "EcoGene:EG10873" + ], + [ + "gene_synonym", + "GI:16131816" + ], + [ + "gene_synonym", + "GeneID:948489" + ], + [ + "gene_synonym", + "JW3949" + ], + [ + "gene_synonym", + "NP_418413.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7K2" + ], + [ + "gene_synonym", + "b3986" + ], + [ + "gene_synonym", + "rplL" + ] + ], + "dna_sequence": "ATGTCTATCACTAAAGATCAAATCATTGAAGCAGTTGCAGCTATGTCTGTAATGGACGTTGTAGAACTGATCTCTGCAATGGAAGAAAAATTCGGTGTTTCCGCTGCTGCTGCTGTAGCTGTAGCTGCTGGCCCGGTTGAAGCTGCTGAAGAAAAAACTGAATTCGACGTAATTCTGAAAGCTGCTGGCGCTAACAAAGTTGCTGTTATCAAAGCAGTACGTGGCGCAACTGGCCTGGGTCTGAAAGAAGCTAAAGACCTGGTAGAATCTGCACCGGCTGCTCTGAAAGAAGGCGTGAGCAAAGACGACGCAGAAGCACTGAAAAAAGCTCTGGAAGAAGCTGGCGCTGAAGTTGAAGTTAAATAA", + "dna_sequence_length": 366, + "functions": [ + "50S ribosomal subunit protein L7/L12" + ], + 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"rif" + ], + [ + "gene_synonym", + "ron" + ], + [ + "gene_synonym", + "rpoB" + ], + [ + "gene_synonym", + "sdgB" + ], + [ + "gene_synonym", + "stl" + ], + [ + "gene_synonym", + "stv" + ], + [ + "gene_synonym", + "tabD" + ], + [ + "gene_synonym", + "tabG" + ] + ], + "dna_sequence": 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"gene_synonym", + "GeneID:948493" + ], + [ + "gene_synonym", + "JW5549" + ], + [ + "gene_synonym", + "NP_418418.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30139" + ], + [ + "gene_synonym", + "b3991" + ], + [ + "gene_synonym", + "thiB" + ], + [ + "gene_synonym", + "thiG" + ] + ], + "dna_sequence": 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"631ac76d71e9ef4147bbd87caf39678f", + "parent_gene": "", + "protein_md5": "696a63d9107a6a09a9347fc1818cc273", + "protein_translation": "MLRIADKTFDSHLFTGTGKFASSQLMVEAIRASGSQLVTLAMKRVDLRQHNDAILEPLIAAGVTLLPNTSGAKTAEEAIFAAHLAREALGTNWLKLEIHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADPVLCKRLEEVGCAAVMPLGAPIGSNQGLETRAMLEIIIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADDPVNMAKAFRLAVEAGLLARQSGPGSRSYFAHATSPLTGFLEASA", + "protein_translation_length": 256, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0023907" + ], + [ + "gene_synonym", + "ECK3983" + ], + [ + "gene_synonym", + "EcoGene:EG14363" + ], + [ + "gene_synonym", + "GI:49176448" + ], + [ + "gene_synonym", + "GeneID:2847702" + ], + [ + "gene_synonym", + "JW3955" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:O32583" + ], + [ + "gene_synonym", + "YP_026279.1" + ], + [ + "gene_synonym", + "b4407" + ], + [ + "gene_synonym", + "thiS" + ] + ], + "dna_sequence": "ATGCAGATCCTGTTTAACGATCAAGCGATGCAGTGCGCCGCCGGGCAAACTGTTCACGAACTACTGGAGCAACTCGACCAACGACAAGCGGGCGCGGCTCTGGCGATTAATCAGCAAATCGTCCCGCGTGAGCAGTGGGCGCAACATATCGTGCAGGATGGCGACCAGATCCTGCTTTTTCAGGTTATTGCAGGGGGTTGA", + "dna_sequence_length": 201, + "functions": [ + "immediate sulfur donor in thiazole formation" + ], + "id": "CDS_3910", + "location": [ + [ + "NC_000913", + 4192837, + "-", + 201 + ] + ], + "md5": "02bb16cf39905d7aa74c5bb96e31a700", + "parent_gene": "", + "protein_md5": "3d4d07c6d0201932400ae28cc925d661", + "protein_translation": "MQILFNDQAMQCAAGQTVHELLEQLDQRQAGAALAINQQIVPREQWAQHIVQDGDQILLFQVIAGG", + "protein_translation_length": 66, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013053" + ], + [ + "gene_synonym", + "ECK3984" + ], + [ + "gene_synonym", + "EcoGene:EG11587" + ], + [ + "gene_synonym", + "GI:90111672" + ], + [ + "gene_synonym", + "GeneID:948500" + ], + [ + "gene_synonym", + "JW3956" + ], + [ + "gene_synonym", + "NP_418420.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30138" + ], + [ + "gene_synonym", + "b3992" + ], + [ + "gene_synonym", + "thiA" + ], + [ + "gene_synonym", + "thiF" + ] + ], + "dna_sequence": "ATGAATGACCGTGACTTTATGCGTTATAGCCGCCAAATCCTGCTCGACGATATCGCTCTGGACGGGCAGCAAAAACTGCTCGACAGCCAGGTGCTGATTATCGGTCTGGGCGGGCTGGGTACACCTGCTGCGCTGTACCTGGCGGGCGCTGGCGTCGGGACGCTGGTACTGGCAGATGACGACGATGTGCATTTAAGCAATCTGCAACGACAAATCCTCTTTACCACTGAAGATATCGATCGCCCGAAATCGCAGGTCAGCCAACAGCGACTGACACAGTTGAATCCCGACATTCAACTGACAGCATTACAACAACGGTTAACGGGTGAGGCGTTAAAAGATGCGGTTGCACGGGCCGATGTGGTGCTCGACTGTACCGACAATATGGCGACTCGCCAGGAGATTAATGCCGCCTGCGTGGCACTCAACACGCCGCTTATCACCGCCAGCGCGGTCGGATTTGGCGGTCAGTTGATGGTACTGACGCCGCCCTGGGAGCAGGGGTGTTACCGCTGCCTGTGGCCAGATAACCAGGAGCCAGAACGCAACTGCCGCACGGCGGGCGTGGTTGGCCCGGTGGTCGGGGTTATGGGCACTTTGCAGGCACTGGAAGCCATTAAGTTATTAAGCGGTATAGAGACACCTGCGGGAGAACTCCGACTGTTCGACGGTAAATCGAGCCAGTGGCGCAGCCTGGCGTTGCGCCGCGCCAGTGGTTGCCCGGTATGCGGAGGAAGCAATGCAGATCCTGTTTAA", + "dna_sequence_length": 756, + "functions": [ + "adenylyltransferase, modifies ThiS C-terminus" + ], + "id": "CDS_3911", + "location": [ + [ + "NC_000913", + 4193576, + "-", + 756 + ] + ], + "md5": "2981c9d7f909e503e800ae275792e3fd", + "parent_gene": "", + "protein_md5": "671c99f93c25609cc246c5d8ff3b74af", + "protein_translation": "MNDRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWPDNQEPERNCRTAGVVGPVVGVMGTLQALEAIKLLSGIETPAGELRLFDGKSSQWRSLALRRASGCPVCGGSNADPV", + "protein_translation_length": 251, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013055" + ], + [ + "gene_synonym", + "ECK3985" + ], + [ + "gene_synonym", + "EcoGene:EG11586" + ], + [ + "gene_synonym", + "GI:16131823" + ], + [ + "gene_synonym", + "GeneID:948491" + ], + [ + "gene_synonym", + "JW3957" + ], + [ + "gene_synonym", + "NP_418421.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30137" + ], + [ + "gene_synonym", 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"d4dc826835be30142e1cddf75205631b", + "parent_gene": "", + "protein_md5": "24082b5fe5a87c8b67f7cf654aa084db", + "protein_translation": "MYQPDFPPVPFRSGLYPVVDSVQWIERLLDAGVRTLQLRIKDRRDEEVEADVVAAIALGRRYNARLFINDYWRLAIKHQAYGVHLGQEDLQATDLNAIRAAGLRLGVSTHDDMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLADYPTVAIGGISLARAPAVIATGVGSIAVVSAITQAADWRLATAQLLEIAGVGDE", + "protein_translation_length": 211, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013057" + ], + [ + "gene_synonym", + "ECK3986" + ], + [ + "gene_synonym", + "EcoGene:EG11585" + ], + [ + "gene_synonym", + "GI:16131824" + ], + [ + "gene_synonym", + "GeneID:948492" + ], + [ + "gene_synonym", + "JW3958" + ], + [ + "gene_synonym", + "NP_418422.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30136" + ], + [ + "gene_synonym", + "b3994" + ], + [ + "gene_synonym", + "thiC" + ] + ], + "dna_sequence": "ATGTCTGCAACAAAACTGACCCGCCGCGAACAACGCGCCCGGGCCCAACATTTTATCGACACCCTGGAAGGCACCGCCTTTCCCAACTCAAAACGCATTTATATCACTGGCACACACCCCGGCGTGCGCGTGCCGATGCGTGAGATCCAGCTTAGCCCGACGCTAATTGGCGGTAGCAAAGAACAGCCGCAGTACGAAGAAAACGAAGCGATTCCGGTCTACGACACCTCCGGCCCGTATGGTGATCCGCAGATTGCCATTAACGTGCAGCAAGGGCTGGCAAAACTACGCCAGCCGTGGATCGATGCGCGCGGCGATACCGAAGAACTTACCGTGCGCAGTTCCGATTACACTAAAGCGCGGCTGGCAGATGATGGCCTCGACGAACTGCGTTTTAGCGGCGTACTAACACCAAAACGCGCCAAAGCAGGACGCCGTGTCACCCAACTGCACTACGCCCGCCAGGGCATCATCACGCCGGAAATGGAATTCATCGCCATCCGCGAGAATATGGGCCGCGAGCGCATCCGTAGCGAGGTTTTACGCCACCAGCATCCGGGAATGAGCTTTGGCGCACATCTGCCGGAAAATATCACTGCGGAATTTGTCCGTGATGAAGTTGCTGCCGGACGTGCGATTATCCCGGCCAACATTAATCATCCGGAATCGGAGCCGATGATTATTGGTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGCGTAACAGCCCGGTGCCGATCGGTACAGTGCCGATCTACCAGGCGCTGGAGAAGGTTAACGGGATCGCCGAAGATCTTACCTGGGAAGCGTTCCGCGACACGCTGCTGGAACAGGCCGAGCAAGGTGTGGATTACTTCACTATCCATGCGGGCGTACTGCTGCGCTATGTGCCGATGACCGCGAAACGCCTGACCGGTATCGTCTCTCGCGGCGGTTCGATTATGGCGAAATGGTGCCTCTCCCATCATCAGGAAAATTTCCTCTATCAACACTTCCGCGAAATTTGTGAAATCTGTGCCGCTTATGACGTTTCGCTGTCGCTGGGCGACGGTCTGCGCCCCGGTTCTATTCAGGACGCCAACGATGAAGCGCAGTTTGCCGAGCTGCATACGCTGGGCGAACTGACCAAAATTGCCTGGGAATATGACGTGCAGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACGATGAAACCCTGCCGCAAGAGTCAGGTAAAGTCGCCCATTTTTGCTCCATGTGTGGGCCGAAATTCTGCTCGATGAAAATCAGCCAGGAAGTGCGTGATTACGCCGCCACGCAAACTATTGAAATGGGAATGGCGGATATGTCGGAGAACTTCCGTGCCAGAGGCGGAGAAATCTACCTGCGTAAGGAGGAAGCGTGA", 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"gene_synonym", + "ASAP:ABE-0013112" + ], + [ + "gene_synonym", + "ECK4003" + ], + [ + "gene_synonym", + "EcoGene:EG11206" + ], + [ + "gene_synonym", + "GI:16131837" + ], + [ + "gene_synonym", + "GeneID:948515" + ], + [ + "gene_synonym", + "JW3971" + ], + [ + "gene_synonym", + "NP_418435.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P09162" + ], + [ + "gene_synonym", + "b4011" + ], + [ + "gene_synonym", + "yjaA" + ] + ], + "dna_sequence": "ATGTCAGTTCTGTATATCCAAATTCGTCGTAATCAAATTACTGTTCGCGATCTTGAAAGCAAACGTGAAGTGTCAGGAGACGCTGCCTTCAGTAACCAGCGCCTGTTAATCGCCAATTTCTTTGTTGCAGAAAAAGTTCTGCAAGATCTTGTTCTGCAACTCCACCCACGTTCAACCTGGCATTCTTTTTTGCCAGCAAAACGTATGGATATTGTTGTGAGCGCACTGGAAATGAATGAGGGCGGTTTGTCACAGGTTGAGGAACGCATTCTCCATGAAGTGGTCGCTGGGGCAACGTTAATGAAATATCGCCAGTTCCACATCCATGCGCAATCAGCGGTACTCAGTGATAGTGCGGTCATGGCAATGCTTAAGCAGAAATAA", + "dna_sequence_length": 384, + "functions": [ + "stress-induced protein" + ], + "id": "CDS_3926", + "location": [ + [ + "NC_000913", + 4213234, + "+", + 384 + ] 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"ATGGTTATTAGTATTCGCCGCTCACGGCATGAGGAAGGGGAGGAACTCGTTGCGATTTGGTGTCGTTCTGTCGATGCCACTCACGATTTTCTATCAGCAGAGTATCGGACCGAGCTGGAGGACCTAGTTCGTTCCTTCCTGCCGGAAGCGCCGTTGTGGGTCGCGGTTAATGAGCGGGATCAGCCGGTTGGATTTATGTTGCTAAGTGGGCAGCATATGGATGCGCTGTTTATCGATCCTGATGTGCGCGGCTGCGGCGTAGGTCGGGTGCTGGTGGAGCATGCGCTCTCGATGGCACCGGAACTGACAACCAACGTTAATGAGCAAAATGAGCAGGCGGTTGGGTTCTATAAGAAGGTGGGTTTTAAGGTTACGGGACGCTCTGAGGTGGACGATTTGGGGAAACCGTATCCGTTGCTGAATCTGGCGTATGTGGGGGCGTAG", + "dna_sequence_length": 444, + "functions": [ + "GNAT-family putative N-acetyltransferase", + "acetyl coenzyme A-binding protein" + ], + "id": "CDS_3927", + "location": [ + [ + "NC_000913", + 4214123, + "-", + 444 + ] + ], + "md5": "4a23fb435dc80674cf6e00bae46e3091", + "parent_gene": "", + "protein_md5": "e82b1aa1f92f0bd46703b0ee99655019", + "protein_translation": "MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRTELEDLVRSFLPEAPLWVAVNERDQPVGFMLLSGQHMDALFIDPDVRGCGVGRVLVEHALSMAPELTTNVNEQNEQAVGFYKKVGFKVTGRSEVDDLGKPYPLLNLAYVGA", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013121" + ], + [ + "gene_synonym", + "ECK4005" + ], + [ + "gene_synonym", + "EcoGene:EG10581" + ], + [ + "gene_synonym", + "GI:16131839" + ], + [ + "gene_synonym", + "GeneID:948513" + ], + [ + "gene_synonym", + "JW3973" + ], + [ + "gene_synonym", + "NP_418437.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07623" + ], + [ + "gene_synonym", + "b4013" + ], + [ + "gene_synonym", + "metA" + ] + ], + "dna_sequence": 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O-transsuccinylase" + ], + "id": "CDS_3928", + "location": [ + [ + "NC_000913", + 4214280, + "+", + 930 + ] + ], + "md5": "8a5b049d22b362cfacfa25fc27cfce48", + "parent_gene": "", + "protein_md5": "3d96cb1101bbc5af060f8eea8e42733a", + "protein_translation": "MPIRVPDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLMPKKIETENQFLRLLSNSPLQVDIQLLRIDSRESRNTPAEHLNNFYCNFEDIQDQNFDGLIVTGAPLGLVEFNDVAYWPQIKQVLEWSKDHVTSTLFVCWAVQAALNILYGIPKQTRTEKLSGVYEHHILHPHALLTRGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGDAYLFASKDKRIAFVTGHPEYDAQTLAQEFFRDVEAGLDPDVPYNYFPHNDPQNTPRASWRSHGNLLFTNWLNYYVYQITPYDLRHMNPTLD", + "protein_translation_length": 309, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013125" + ], + [ + "gene_synonym", + "ECK4006" + ], + [ + "gene_synonym", + "EcoGene:EG10023" + ], + [ + "gene_synonym", + "GI:16131840" + ], + [ + "gene_synonym", + "GeneID:948512" + ], + [ + "gene_synonym", + "JW3974" + ], + [ + "gene_synonym", + "NP_418438.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08997" + ], + [ + "gene_synonym", + "aceB" + ], + [ + "gene_synonym", + "b4014" + ], + [ + "gene_synonym", + "mas" + ] + ], + "dna_sequence": 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"ECK4007" + ], + [ + "gene_synonym", + "EcoGene:EG10022" + ], + [ + "gene_synonym", + "GI:16131841" + ], + [ + "gene_synonym", + "GeneID:948517" + ], + [ + "gene_synonym", + "JW3975" + ], + [ + "gene_synonym", + "NP_418439.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9G6" + ], + [ + "gene_synonym", + "aceA" + ], + [ + "gene_synonym", + "b4015" + ], + [ + "gene_synonym", + "icl" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "GeneID:944797" + ], + [ + "gene_synonym", + "JW3976" + ], + [ + "gene_synonym", + "NP_418440.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P11071" + ], + [ + "gene_synonym", + "aceK" + ], + [ + "gene_synonym", + "b4016" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0013133" + ], + [ + "gene_synonym", + "ECK4009" + ], + [ + "gene_synonym", + "EcoGene:EG11208" + ], + [ + "gene_synonym", + "GI:16131843" + ], + [ + "gene_synonym", + "GeneID:944933" + ], + [ + "gene_synonym", + "JW3977" + ], + [ + "gene_synonym", + "NP_418441.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23325" + ], + [ + "gene_synonym", + "arpA" + ], + [ + "gene_synonym", + "b4017" + ], + [ + "gene_synonym", + "yjaC" + ] + ], + "dna_sequence": 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"MITRIPRSSFSANINNTAQTNEHQTLSELFYKELEDKFSGKELATPLLKSFSENCRQNGRHIFSNKDFVIKFSTSVLQADKKEITIINKNENTTLTQTIAPIFEKYLMEILPQRSDTLDKQELNLKSDRKEKEFPRIKLNGQCYFPGRPQNRIVCRHIAAQYINDIYQNVDYKPHQDDYSSAEKFLTHFNKKCKNQTLALVSSRPEGRCVAACGDFGLVMKAYFDKMESNGISVMAAILLVDNHALTVRLRIKNTTEGCTHYVVSVYDPNVTNDKIRIMSESKENIKHYSLMDFMNVDYSLLKWSNDHVINQSVAIIPALPKEQLLMLKGSVDEITPPLSPATMNLLMAIGQNHQLTQLMIQLQKMPELHRTEMLTAYNSINLPGLYLAINYGNADIVETIFNSLSETGYEGLLSKKNLMHILEAKDKNGFSGLFLAISRKDKNVVTSILNALPKLAATHHLDNEQVYKFLSAKNRTSSHVLYHVMANGDADMLKIVLNALPLLIRTCHLTKEQVLDLLKAKDFYGCPGLYLAMQNGHSDIVKVILEALPSLAQEINISASDIVDLLTAKSLARDTGLFMAMQRGHMNVINTIFNALPTLFNTFKFDKKNMKPLLLANNSNEYPGLFSAIQHKQQNVVETVYLALSDHARLFGFTAEDIMDFWQHKAPQKYSAFELAFEFGHRVIAELILNTLNKMAESFGFTDNPRYIAEKNYMEALLKKASPHTVR", + "protein_translation_length": 728, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013136" + ], + [ + "gene_synonym", + "ECK4010" + ], + [ + "gene_synonym", + "EcoGene:EG10491" + ], + [ + "gene_synonym", + "GI:90111675" + ], + [ + "gene_synonym", + "GeneID:948524" + ], + [ + "gene_synonym", + "JW3978" + ], + [ + "gene_synonym", + "NP_418442.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16528" + ], + [ + "gene_synonym", + "b4018" + ], + [ + "gene_synonym", + "iclR" + ] + ], + "dna_sequence": 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"MSSKVEQLRAQLNERILVLDGGMGTMIQSYRLNEADFRGERFADWPCDLKGNNDLLVLSKPEVIAAIHNAYFEAGADIIETNTFNSTTIAMADYQMESLSAEINFAAAKLARACADEWTARTPEKPRYVAGVLGPTNRTASISPDVNDPAFRNITFDGLVAAYRESTKALVEGGADLILIETVFDTLNAKAAVFAVKTEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSLRHAEALTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAGLPNAFGEYDLDADTMAKQIREWAQAGFLNIVGGCCGTTPQHIAAMSRAVEGLAPRKLPEIPVACRLSGLEPLNIGEDSLFVNVGERTNVTGSAKFKRLIKEEKYSEALDVARQQVENGAQIIDINMDEGMLDAEAAMVRFLNLIAGEPDIARVPIMIDSSKWDVIEKGLKCIQGKGIVNSISMKEGVDAFIHHAKLLRRYGAAVVVMAFDEQGQADTRARKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQDFIGACEDIKRELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAGQLAIYDDLPAELRDAVEDVILNRRDDGTERLLELAEKYRGSKTDDTANAQQAEWRSWEVNKRLEYSLVKGITEFIEQDTEEARQQATRPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAYLEPFIEASKEQGKTNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKAHTAVKIEQNYSGPTVYVQNASRTVGVVAALLSDTQRDDFVARTRKEYETVRIQHGRKKPRTPPVTLEAARDNDFAFDWQAYTPPVAHRLGVQEVEASIETLRNYIDWTPFFMTWSLAGKYPRILEDEVVGVEAQRLFKDANDMLDKLSAEKTLNPRGVVGLFPANRVGDDIEIYRDETRTHVINVSHHLRQQTEKTGFANYCLADFVAPKLSGKADYIGAFAVTGGLEEDALADAFEAQHDDYNKIMVKALADRLAEAFAEYLHERVRKVYWGYAPNENLSNEELIRENYQGIRPAPGYPACPEHTEKATIWELLEVEKHTGMKLTESFAMWPGASVSGWYFSHPDSKYYAVAQIQRDQVEDYARRKGMSVTEVERWLAPNLGYDAD", 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"GTGTTAACGCTGCTTCACCTGCTTTCTGCCGTCGCCCTGCTGGTCTGGGGGACTCATATTGTTCGAACCGGCGTAATGCGCGTCTTCGGCGCGCGTTTGCGTACTGTCCTTAGCCGGAGCGTCGAAAAAAAGCCGCTCGCCTTTTGCGCGGGGATCGGCGTTACCGCACTGGTACAGAGCAGTAATGCCACCACCATGCTGGTGACCTCGTTTGTCGCTCAGGATCTGGTAGCCCTCGCACCGGCTCTGGTCATTGTGCTGGGTGCAGATGTCGGGACGGCGCTAATGGCGCGTATTCTCACCTTCGACTTATCCTGGCTGTCACCGTTACTTATTTTTATCGGCGTGATTTTTTTCCTCGGACGCAAACAGTCACGCGCCGGGCAACTGGGCCGCGTCGGTATTGGTCTTGGGCTGATTTTGCTAGCGCTGGAGTTGATTGTGCAGGCCGTAACGCCGATCACCCAGGCAAACGGCGTTCAGGTGATCTTTGCCTCGCTGACCGGCGATATTCTGCTGGATGCGCTGATTGGCGCGATGTTCGCCATTATCAGCTACTCCAGCCTTGCTGCTGTACTGCTGACCGCGACTCTGACCGCCGCAGGCATTATCTCCTTCCCCGTGGCGCTCTGTCTGGTGATTGGTGCTAACCTCGGTTCCGGTCTGCTGGCAATGCTCAACAACAGTGCCGCCAATGCCGCAGCCCGCCGTGTCGCGCTGGGTAGTCTGCTGTTTAAGCTGGTGGGTAGCCTGATTATCCTGCCGTTTGTCCATTTGCTGGCAGAGACAATGGGGAAGTTGTCATTGCCAAAAGCGGAACTGGTGATCTATTTCCACGTCTTCTACAACCTTGTACGTTGCCTGGTCATGCTGCCATTTGTTGACCCGATGGCACGGTTTTGCAAAACGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGCGAAACCCTGCGCATTGGCGACGCCATGGAACAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCGGATGCCAAAAGAAGAGCTGGCGGAGGAAGAGTCGCGCCGCTGGGCAGAGATCATCGAAATGTCGCTCAACCTTGAACAGGCCTCCGATATCGTCGAGCGCATGGGCAGCGAAATTGCTGACAAATCACTGGCAGCACGGCGGGCATTTTCGCTTGATGGGTTGAAGGAACTGGATGCGCTCTATGAGCAATTGCTCAGTAATTTAAAGCTGGCAATGTCGGTGTTCTTCTCTGGCGATGTCACCAGCGCTCGTCGTTTGCGTCGCAGCAAACATCGTTTTCGCATTCTTAATCGCCGCTATTCCCACGCCCACGTCGATCGCCTGCATCAGCAAAACGTGCAGAGCATTGAAACCAGTTCGCTACATTTAGGCTTACTGGGAGATATGCAGCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAA", 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"gene_synonym", + "ECK4013" + ], + [ + "gene_synonym", + "EcoGene:EG11920" + ], + [ + "gene_synonym", + "GI:16131847" + ], + [ + "gene_synonym", + "GeneID:948520" + ], + [ + "gene_synonym", + "JW3981" + ], + [ + "gene_synonym", + "NP_418445.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A7C6" + ], + [ + "gene_synonym", + "b4021" + ], + [ + "gene_synonym", + "pepE" + ] + ], + "dna_sequence": 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"protein_translation": "MELLLLSNSTLPGKAWLEHALPLIAEQLQGRRSAVFIPFAGVTQTWDDYTAKTAAVLAPLGVSVTGIHSVVDPVAAIENAEIVIVGGGNTFQLLKQCRERGLLAPITDVVKRGALYIGWSAGANLACPTIRTTNDMPIVDPQGFDALNLFPLQINPHFTNALPEGHKGETREQRIRELLVVAPELTIIGLPEGNWITVSKGHATLGGPNTTYVFKAGEEAVPLEAGHRF", + "protein_translation_length": 229, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013150" + ], + [ + "gene_synonym", + "ECK4014" + ], + [ + "gene_synonym", + "EcoGene:EG11921" + ], + [ + "gene_synonym", + "GI:16131848" + ], + [ + "gene_synonym", + "GeneID:948519" + ], + [ + "gene_synonym", + "JW3982" + ], + [ + "gene_synonym", + "NP_418446.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32684" + ], + [ + "gene_synonym", + "b4022" + ], + [ + "gene_synonym", + "rluF" + ], + [ + "gene_synonym", + "yjbC" + ] + ], + "dna_sequence": "ATGCTGCCCGACTCATCAGTCCGTTTAAATAAATACATCAGCGAAAGCGGAATTTGCTCACGCCGCGAAGCGGATCGCTATATCGAGCAAGGCAATGTGTTCCTTAATGGCAAGCGAGCCACCATTGGCGATCAGGTGAAACCCGGCGACGTTGTGAAAGTAAACGGTCAGTTGATTGAACCTCGGGAAGCCGAAGATTTGGTACTTATCGCCCTGAACAAGCCCGTTGGTATTGTAAGCACCACCGAAGATGGCGAGCGCGATAACATTGTCGATTTCGTTAACCACAGCAAACGCGTGTTCCCGATTGGCCGCCTGGATAAAGACTCCCAGGGGCTGATTTTCCTCACCAATCACGGCGATCTGGTGAATAAGATCCTGCGTGCTGGCAATGATCATGAGAAAGAGTATCTGGTGACGGTCGATAAACCGATTACCGAGGAGTTTATTCGCGGCATGAGTGCGGGGGTGCCAATCCTCGGGACAGTGACCAAAAAGTGCAAAGTTAAAAAAGAAGCGCCGTTTGTCTTCCGCATTACCCTGGTGCAGGGGCTGAACCGTCAGATCCGGCGCATGTGCGAGCATTTCGGCTATGAAGTGAAAAAGCTGGAACGCACGCGCATCATGAACGTTAGCTTAAGCGGCATTCCGCTGGGGGAATGGCGCGATTTAACCGACGATGAGTTAATCGACCTCTTTAAGCTCATTGAAAATTCCTCTTCCGAGGTAAAACCTAAAGCGAAGGCCAAACCGAAAACAGCGGGCATCAAACGTCCAGTCGTTAAGATGGAAAAAACGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGGCGCTGA", + "dna_sequence_length": 873, + "functions": [ + "23S rRNA pseudouridine(2604) synthase" + ], + "id": "CDS_3937", + "location": [ + [ + "NC_000913", + 4230354, + "+", + 873 + ] + ], + "md5": "5bfbed0780696a71d901a04cc860eab4", + "parent_gene": "", + "protein_md5": "18085dc49132ac66c5998c97ebbf1595", + "protein_translation": "MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR", + "protein_translation_length": 290, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013153" + ], + [ + "gene_synonym", + "ECK4015" + ], + [ + "gene_synonym", + "EcoGene:EG11922" + ], + [ + "gene_synonym", + "GI:16131849" + ], + [ + "gene_synonym", + "GeneID:948518" + ], + [ + "gene_synonym", + "JW3983" + ], + [ + "gene_synonym", + "NP_418447.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32685" + ], + [ + "gene_synonym", + "b4023" + ], + [ + "gene_synonym", + "yjbD" + ] + ], + "dna_sequence": "ATGGCACTCCCCCGTATTACCCAAAAAGAGATGACTGAACGCGAGCAGCGTGAACTTAAAACACTGCTGGATCGGGCGCGGATTGCGCATGGTCGCGTATTGACCAACTCCGAAACCAACAGCATTAAGAAAGATTACATCGATAAATTAATGGTTGAGCGTGAGGCTGAAGCGAAAAAAGCCCGCCAGTTGAAGAAAAAGCAGGCTTATAAACCGGATCCTGAAGCGTCATTTAGCTGGTCAGCAAATACGTCGACGCGCGGCAGGCGCTAA", + "dna_sequence_length": 273, + "functions": [ + "DUF3811 family protein" + ], + "id": "CDS_3938", + "location": [ + [ + "NC_000913", + 4231631, + "-", + 273 + ] + ], + "md5": "4c00af5ea47167f72ec6dc93223af4f2", + "parent_gene": "", + "protein_md5": "86e49383df817859f3cd644300bf75d7", + "protein_translation": "MALPRITQKEMTEREQRELKTLLDRARIAHGRVLTNSETNSIKKDYIDKLMVEREAEAKKARQLKKKQAYKPDPEASFSWSANTSTRGRR", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013156" + ], + [ + "gene_synonym", + "ECK4016" + ], + [ + "gene_synonym", + "EcoGene:EG10550" + ], + [ + "gene_synonym", + "GI:16131850" + ], + [ + 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"functions": [ + "uncharacterized protein" + ], + "id": "CDS_3963", + "location": [ + [ + "NC_000913", + 4260321, + "+", + 255 + ] + ], + "md5": "b08c2313b2e0bcda6a93d0135bee2dc8", + "parent_gene": "", + "protein_md5": "38a3977740e37b9bb28288ef09c15954", + "protein_translation": "MLKIIPGATGYFNKTLNSNQFDNEDAIKDKLDNRGSIKGKLNNIYGKSIDYAALRHRDIIIAKIDLFIQRITHNLWHARKKMCF", + "protein_translation_length": 84, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013255" + ], + [ + "gene_synonym", + "ECK4040" + ], + [ + "gene_synonym", + "EcoGene:EG11931" + ], + [ + "gene_synonym", + "GI:16131874" + ], + [ + "gene_synonym", + "GeneID:948550" + ], + [ + "gene_synonym", + "JW4008" + ], + [ + "gene_synonym", + "NP_418472.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32694" + ], + [ + "gene_synonym", + "b4048" + ], + [ + "gene_synonym", + "yjbM" + ] + ], + "dna_sequence": 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"protein_translation": "MWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICNPGDNKDAMPIEQCTFDVETKNDLPSTVQLFYEESKDNEPLANIHFQAIGSGFLTFVNACQEHDDNSLKLFASLLISLSYSSAYADLSETVYINENNESYLKAQFEKLSQRDMKKYLGEMKRLADGGEMNFDGYLDKMSHLVNEGTLDPDILSKMRDAAPQLISFAKSFDPTSKEEIKILTDTSKLIYDLFGVKSEK", + "protein_translation_length": 235, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013258" + ], + [ + "gene_synonym", + "ECK4041" + ], + [ + "gene_synonym", + "EcoGene:EG11932" + ], + [ + "gene_synonym", + "GI:635341467" + ], + [ + "gene_synonym", + "GeneID:948558" + ], + [ + "gene_synonym", + "JW5950" + ], + [ + "gene_synonym", + "NP_418473.3" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32695" + ], + [ + "gene_synonym", + "b4049" + ], + [ + "gene_synonym", + "dusA" + ], + [ + "gene_synonym", + "yjbN" + ] + ], + "dna_sequence": 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"JW5716" + ], + [ + "gene_synonym", + "NP_418474.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32696" + ], + [ + "gene_synonym", + "b4050" + ], + [ + "gene_synonym", + "pspG" + ], + [ + "gene_synonym", + "yjbO" + ] + ], + "dna_sequence": "ATGCTGGAACTACTTTTTGTGATTGGCTTTTTTGTCATGCTGATGGTCACCGGCGTTTCGTTGCTGGGCATTATCGCCGCGCTGGTTGTGGCGACGGCCATTATGTTCCTCGGCGGTATGCTGGCATTGATGATTAAGTTGCTGCCGTGGTTACTACTGGCGATTGCGGTGGTGTGGGTTATTAAGGCGATTAAAGCACCAAAAGTGCCGAAATATCAGCGTTATGACCGCTGGCGTTACTAA", + "dna_sequence_length": 243, + "functions": [ + "phage shock protein G" + ], + "id": "CDS_3966", + "location": [ + [ + "NC_000913", + 4262840, + "+", + 243 + ] + ], + "md5": "4164a4be6f5aa4199cf8b649d0920017", + "parent_gene": "", + "protein_md5": "4443201c69f83993fd291831999936fe", + "protein_translation": "MLELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALMIKLLPWLLLAIAVVWVIKAIKAPKVPKYQRYDRWRY", + "protein_translation_length": 80, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + 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"protein_translation_length": 154, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013319" + ], + [ + "gene_synonym", + "ECK4057" + ], + [ + "gene_synonym", + "EcoGene:EG11939" + ], + [ + "gene_synonym", + "GI:16131890" + ], + [ + "gene_synonym", + "GeneID:948565" + ], + [ + "gene_synonym", + "JW4025" + ], + [ + "gene_synonym", + "NP_418488.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF52" + ], + [ + "gene_synonym", + "b4064" + ], + [ + "gene_synonym", + "ghxP" + ], + [ + "gene_synonym", + "yjcD" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG11940" + ], + [ + "gene_synonym", + "GI:16131891" + ], + [ + "gene_synonym", + "GeneID:948577" + ], + [ + "gene_synonym", + "JW4026" + ], + [ + "gene_synonym", + "NP_418489.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32703" + ], + [ + "gene_synonym", + "b4065" + ], + [ + "gene_synonym", + "yjcE" + ] + ], + "dna_sequence": 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], + [ + "gene_synonym", + "ECK4059" + ], + [ + "gene_synonym", + "EcoGene:EG11941" + ], + [ + "gene_synonym", + "GI:16131892" + ], + [ + "gene_synonym", + "GeneID:948576" + ], + [ + "gene_synonym", + "JW4027" + ], + [ + "gene_synonym", + "NP_418490.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32704" + ], + [ + "gene_synonym", + "b4066" + ], + [ + "gene_synonym", + "yjcF" + ] + ], + "dna_sequence": 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"GI:16131893" + ], + [ + "gene_synonym", + "GeneID:948575" + ], + [ + "gene_synonym", + "JW4028" + ], + [ + "gene_synonym", + "NP_418491.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32705" + ], + [ + "gene_synonym", + "actP" + ], + [ + "gene_synonym", + "b4067" + ], + [ + "gene_synonym", + "yjcG" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK4061" + ], + [ + "gene_synonym", + "EcoGene:EG11943" + ], + [ + "gene_synonym", + "GI:16131894" + ], + [ + "gene_synonym", + "GeneID:948574" + ], + [ + "gene_synonym", + "JW4029" + ], + [ + "gene_synonym", + "NP_418492.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF54" + ], + [ + "gene_synonym", + "b4068" + ], + [ + "gene_synonym", + "yjcH" + ] + ], + "dna_sequence": "ATGAATGGCACTATTTATCAGCGGATAGAAGACAATGCGCATTTCAGGGAGTTAGTCGAAAAACGGCAACGGTTTGCCACCATCCTGTCGATTATTATGCTGGCAGTTTATATCGGCTTTATTTTACTGATCGCCTTCGCGCCCGGCTGGCTGGGCACGCCGCTGAATCCGAACACCAGCGTCACACGCGGTATTCCAATTGGTGTTGGAGTGATTGTGATCTCCTTTGTTCTCACCGGTATCTACATCTGGCGGGCGAACGGCGAATTCGACCGTCTTAATAATGAAGTCCTGCATGAGGTACAAGCATCATGA", + "dna_sequence_length": 315, + "functions": [ + "DUF485 family inner membrane protein" + ], + "id": "CDS_3985", + "location": [ + [ + "NC_000913", + 4285213, + "-", + 315 + ] + ], + "md5": "7ffac60ec9e851690a1d49c3eddc70cd", + "parent_gene": "", + "protein_md5": "f0ca57b7d8601f2a5ccdf27978c77e4d", + "protein_translation": "MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQAS", + "protein_translation_length": 104, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013337" + ], + [ + "gene_synonym", + "ECK4062" + ], + [ + "gene_synonym", + "EcoGene:EG11448" + ], + [ + "gene_synonym", + "GI:16131895" + ], + [ + "gene_synonym", + "GeneID:948572" + ], + [ + "gene_synonym", + "JW4030" + ], + [ + "gene_synonym", + "NP_418493.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27550" + ], + [ + "gene_synonym", + "acs" + ], + [ + "gene_synonym", + "acsA" + ], + [ + "gene_synonym", + "b4069" + ], + [ + "gene_synonym", + "yfaC" + ] + ], + "dna_sequence": "ATGAGCCAAATTCACAAACACACCATTCCTGCCAACATCGCAGACCGTTGCCTGATAAACCCTCAGCAGTACGAGGCGATGTATCAACAATCTATTAACGTACCTGATACCTTCTGGGGCGAACAGGGAAAAATTCTTGACTGGATCAAACCTTACCAGAAGGTGAAAAACACCTCCTTTGCCCCCGGTAATGTGTCCATTAAATGGTACGAGGACGGCACGCTGAATCTGGCGGCAAACTGCCTTGACCGCCATCTGCAAGAAAACGGCGATCGTACCGCCATCATCTGGGAAGGCGACGACGCCAGCCAGAGCAAACATATCAGCTATAAAGAGCTGCACCGCGACGTCTGCCGCTTCGCCAATACCCTGCTCGAGCTGGGCATTAAAAAAGGTGATGTGGTGGCGATTTATATGCCGATGGTGCCGGAAGCCGCGGTTGCGATGCTGGCCTGCGCCCGCATTGGCGCGGTGCATTCGGTGATTTTCGGCGGCTTCTCGCCGGAAGCCGTTGCCGGGCGCATTATTGATTCCAACTCACGACTGGTGATCACTTCCGACGAAGGTGTGCGTGCCGGGCGCAGTATTCCGCTGAAGAAAAACGTTGATGACGCGCTGAAAAACCCGAACGTCACCAGCGTAGAGCATGTGGTGGTACTGAAGCGTACTGGCGGGAAAATTGACTGGCAGGAAGGGCGCGACCTGTGGTGGCACGACCTGGTTGAGCAAGCGAGCGATCAGCACCAGGCGGAAGAGATGAACGCCGAAGATCCGCTGTTTATTCTCTACACCTCCGGTTCTACCGGTAAGCCAAAAGGTGTGCTGCATACTACCGGCGGTTATCTGGTGTACGCGGCGCTGACCTTTAAATATGTCTTTGATTATCATCCGGGTGATATCTACTGGTGCACCGCCGATGTGGGCTGGGTGACCGGACACAGTTACTTGCTGTACGGCCCGCTGGCCTGCGGTGCGACCACGCTGATGTTTGAAGGCGTACCCAACTGGCCGACGCCTGCCCGTATGGCGCAGGTGGTGGACAAGCATCAGGTCAATATTCTCTATACCGCACCCACGGCGATCCGCGCGCTGATGGCGGAAGGCGATAAAGCGATCGAAGGCACCGACCGTTCGTCGCTGCGCATTCTCGGTTCCGTGGGCGAGCCAATTAACCCGGAAGCGTGGGAGTGGTACTGGAAAAAAATCGGCAACGAGAAATGTCCGGTGGTCGATACCTGGTGGCAGACCGAAACCGGCGGTTTCATGATCACCCCGCTGCCTGGCGCTACCGAGCTGAAAGCCGGTTCGGCAACACGTCCGTTCTTCGGCGTGCAACCGGCGCTGGTCGATAACGAAGGTAACCCGCTGGAGGGGGCCACCGAAGGTAGCCTGGTAATCACCGACTCCTGGCCGGGTCAGGCGCGTACGCTGTTTGGCGATCACGAACGTTTTGAACAGACCTACTTCTCCACCTTCAAAAATATGTATTTCAGCGGCGACGGCGCGCGTCGCGATGAAGATGGCTATTACTGGATAACCGGGCGTGTGGACGACGTGCTGAACGTCTCCGGTCACCGTCTGGGGACGGCAGAGATTGAGTCGGCGCTGGTGGCGCATCCGAAGATTGCCGAAGCCGCCGTAGTAGGTATTCCGCACAATATTAAAGGTCAGGCGATCTACGCCTACGTCACGCTTAATCACGGGGAGGAACCGTCACCAGAACTGTACGCAGAAGTCCGCAACTGGGTGCGTAAAGAGATTGGCCCGCTGGCGACGCCAGACGTGCTGCACTGGACCGACTCCCTGCCTAAAACCCGCTCCGGCAAAATTATGCGCCGTATTCTGCGCAAAATTGCGGCGGGCGATACCAGCAACCTGGGCGATACCTCGACGCTTGCCGATCCTGGCGTAGTCGAGAAGCTGCTTGAAGAGAAGCAGGCTATCGCGATGCCATCGTAA", 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652, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013342" + ], + [ + "gene_synonym", + "ECK4063" + ], + [ + "gene_synonym", + "EcoGene:EG11781" + ], + [ + "gene_synonym", + "GI:16131896" + ], + [ + "gene_synonym", + "GeneID:948571" + ], + [ + "gene_synonym", + "JW4031" + ], + [ + "gene_synonym", + "NP_418494.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABK9" + ], + [ + "gene_synonym", + "b4070" + ], + [ + "gene_synonym", + "nrfA" + ] + ], + "dna_sequence": 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"dna_sequence_length": 690, + "functions": [ + "Sel1 family TPR-like repeat protein" + ], + "id": "CDS_3995", + "location": [ + [ + "NC_000913", + 4297125, + "-", + 690 + ] + ], + "md5": "9a1c58b4c773a44437d2d4c138f90949", + "parent_gene": "", + "protein_md5": "c1956ba4f44fc32d2743103cc50fac91", + "protein_translation": "MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADSWFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGYSEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEGFDTGCEEFEKLTNG", + "protein_translation_length": 229, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013363" + ], + [ + "gene_synonym", + "ECK4072" + ], + [ + "gene_synonym", + "EcoGene:EG10285" + ], + [ + "gene_synonym", + "GI:16131905" + ], + [ + "gene_synonym", + "GeneID:948584" + ], + [ + "gene_synonym", + "JW4040" + ], + [ + "gene_synonym", + "NP_418503.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P07658" + ], + [ + "gene_synonym", + "b4079" + ], + [ + "gene_synonym", + "fdhF" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG11953" + ], + [ + "gene_synonym", + "GI:90111683" + ], + [ + "gene_synonym", + "GeneID:948582" + ], + [ + "gene_synonym", + "JW4042" + ], + [ + "gene_synonym", + "NP_418505.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32715" + ], + [ + "gene_synonym", + "b4081" + ], + [ + "gene_synonym", + "mdtO" + ], + [ + "gene_synonym", + "sdsQ" + ], + [ + "gene_synonym", + "yjcQ" + ] + ], + "dna_sequence": 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"MSALNSLPLPVVRLLAFFHEELSERRPGRVPQTVQLWVGCLLVILISMTFEIPFVALSLAVLFYGIQSNAFYTKFVAILFVVATVLEIGSLFLIYKWSYGEPLIRLIIAGPILMGCMFLMRTHRLGLVFFAVAIVAIYGQTFPAMLDYPEVVVRLTLWCIVVGLYPTLLMTLIGVLWFPSRAISQMHQALNDRLDDAISHLTDSLAPLPETRIEREALALQKLNVFCLADDANWRTQNAWWQSCVATVTYIYSTLNRYDPTSFADSQAIIEFRQKLASEINKLQHAVAEGQCWQSDWRISESEAMAARECNLENICQTLLQLGQMDPNTPPTPAAKPPSMAADAFTNPDYMRYAVKTLLACLICYTFYSGVDWEGIHTCMLTCVIVANPNVGSSYQKMVLRFGGAFCGAILALLFTLLVMPWLDNIVELLFVLAPIFLLGAWIATSSERSSYIGTQMVVTFALATLENVFGPVYDLVEIRDRALGIIIGTVVSAVIYTFVWPESEARTLPQKLAGTLGMLSKVMRIPRQQEVTALRTYLQIRIGLHAAFNACEEMCQRVALERQLDSEERALLIERSQTVIRQGRDLLHAWDATWNSAQALDNALQPDRAGQFADALEKYAAGLATALSRSPQITLEETPASQAILPTLLKQEQHVCQLFARLPDWTAPALTPATEQAQGATQ", + "protein_translation_length": 683, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013373" + ], + [ + "gene_synonym", + "ECK4075" + ], + [ + "gene_synonym", + "EcoGene:EG11954" + ], + [ + "gene_synonym", + "GI:16131908" + ], + [ + "gene_synonym", + "GeneID:948598" + ], + [ + "gene_synonym", + "JW4043" + ], + [ + "gene_synonym", + "NP_418506.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32716" + ], + [ + "gene_synonym", + "b4082" + ], + [ + "gene_synonym", + "mdtN" + ], + [ + "gene_synonym", + "sdsR" + ], + [ + "gene_synonym", + "yjcR" + ] + ], + "dna_sequence": 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"protein_translation_length": 661, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013380" + ], + [ + "gene_synonym", + "ECK4077" + ], + [ + "gene_synonym", + "EcoGene:EG11956" + ], + [ + "gene_synonym", + "GI:16131910" + ], + [ + "gene_synonym", + "GeneID:948596" + ], + [ + "gene_synonym", + "JW5724" + ], + [ + "gene_synonym", + "NP_418508.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32718" + ], + [ + "gene_synonym", + "alsK" + ], + [ + "gene_synonym", + "b4084" + ], + [ + "gene_synonym", + "yjcT" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_418511.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P32721" + ], + [ + "gene_synonym", + "alsA" + ], + [ + "gene_synonym", + "b4087" + ], + [ + "gene_synonym", + "yjcW" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "ASAP:ABE-0013451" + ], + [ + "gene_synonym", + "ECK4101" + ], + [ + "gene_synonym", + "EcoGene:EG10711" + ], + [ + "gene_synonym", + "GI:16131934" + ], + [ + "gene_synonym", + "GeneID:948621" + ], + [ + "gene_synonym", + "JW4069" + ], + [ + "gene_synonym", + "NP_418532.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFJ1" + ], + [ + "gene_synonym", + "b4108" + ], + [ + "gene_synonym", + "phnA" + ], + [ + "gene_synonym", + "yjdM" + ] + ], + "dna_sequence": "ATGTCATTACCACACTGCCCAAAATGCAACTCCGAATACACCTACGAAGATAACGGCATGTACATCTGCCCGGAATGTGCCTACGAATGGAACGACGCAGAACCTGCACAGGAAAGCGACGAGCTGATCGTTAAAGATGCTAACGGCAATCTGCTGGCTGACGGCGACAGCGTTACCATCATTAAAGATCTGAAGGTGAAAGGTAGCTCTTCGATGCTGAAAATTGGCACCAAAGTGAAAAACATCCGCCTGGTTGAAGGCGACCATAACATCGATTGCAAAATCGACGGTTTTGGTCCGATGAAACTGAAATCTGAGTTTGTGAAAAAGAACTGA", + "dna_sequence_length": 336, + "functions": [ + "zinc-ribbon family protein" + ], + "id": "CDS_4025", + "location": [ + [ + "NC_000913", + 4326734, + "-", + 336 + ] + 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"gene_synonym", + "GI:345452724" + ], + [ + "gene_synonym", + "GeneID:11115379" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:G3MTW7" + ], + [ + "gene_synonym", + "YP_004831120.1" + ], + [ + "gene_synonym", + "b4703" + ], + [ + "gene_synonym", + "pmrR" + ] + ], + "dna_sequence": "ATGAAAAACCGTGTTTATGAAAGTTTAACTACCGTGTTCAGCGTGCTGGTGGTCAGCAGCTTTCTTTATATCTGGTTTGCCACGTACTGA", + "dna_sequence_length": 90, + "functions": [ + "putative membrane-bound BasS regulator" + ], + "id": "CDS_4029", + "location": [ + [ + "NC_000913", + 4332116, + "+", + 90 + ] + ], + "md5": "e4486611a98bdbcf95fa61692e9a4166", + "parent_gene": "", + "protein_md5": "609abafe5334aa00f725dff12740eb57", + "protein_translation": "MKNRVYESLTTVFSVLVVSSFLYIWFATY", + "protein_translation_length": 29, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013464" + ], + [ + "gene_synonym", + "ECK4105" + ], + [ + "gene_synonym", + "EcoGene:EG11614" + ], + [ + "gene_synonym", + "GI:16131938" + ], + [ + "gene_synonym", + "GeneID:948632" + ], + [ + "gene_synonym", + "JW4073" + ], + [ + "gene_synonym", + "NP_418536.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P30844" + ], + [ + "gene_synonym", + "b4112" + ], + [ + "gene_synonym", + "basS" + ], + [ + "gene_synonym", + "pmrB" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P30845" + ], + [ + "gene_synonym", + "b4114" + ], + [ + "gene_synonym", + "eptA" + ], + [ + "gene_synonym", + "pagB" + ], + [ + "gene_synonym", + "pmrC" + ], + [ + "gene_synonym", + "yjdB" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:P06720" + ], + [ + "gene_synonym", + "b4119" + ], + [ + "gene_synonym", + "mel-7" + ], + [ + "gene_synonym", + "melA" + ] + ], + "dna_sequence": 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"GNAT family putative N-acetyltransferase" + ], + "id": "CDS_4045", + "location": [ + [ + "NC_000913", + 4352085, + "+", + 273 + ] + ], + "md5": "adcb6507c44b9e9d9aa7d79f3b5833e6", + "parent_gene": "", + "protein_md5": "2b5f1c1b38a8e69a6bcb5dce2d9bf6f2", + "protein_translation": "MEIREGHNKFYINDKQGKQIAEIVFVPTGENLAIIEHTDVDESLKGQGIGKQLVAKVVEKMRREKRKIIPLCPFAKHEFDKTREYDDIRS", + "protein_translation_length": 90, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013518" + ], + [ + "gene_synonym", + "ECK4121" + ], + [ + "gene_synonym", + "EcoGene:EG12468" + ], + [ + "gene_synonym", + "GI:16131954" + ], + [ + "gene_synonym", + "GeneID:948646" + ], + [ + "gene_synonym", + "JW4089" + ], + [ + "gene_synonym", + "NP_418552.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF61" + ], + [ + "gene_synonym", + "b4128" + ], + [ + "gene_synonym", + "ghoS" + ], + [ + "gene_synonym", + "yjdK" + ] + ], + "dna_sequence": 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"GI:94541131" + ], + [ + "gene_synonym", + "GeneID:1450308" + ], + [ + "gene_synonym", + "JW5732" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P64646" + ], + [ + "gene_synonym", + "YP_588474.1" + ], + [ + "gene_synonym", + "b4559" + ], + [ + "gene_synonym", + "ghoT" + ], + [ + "gene_synonym", + "yjdO" + ] + ], + "dna_sequence": "ATGGCACTATTCTCTAAAATATTAATTTTTTATGTGATTGGTGTGAACATATCCTTTGTCATTATCTGGTTTATCTCACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAG", + "dna_sequence_length": 174, + "functions": [ + "toxin of GhoTS toxin-antitoxin pair", + "membrane-lytic protein", + "stimulator of persister cell formation" + ], + "id": "CDS_4047", + "location": [ + [ + "NC_000913", + 4352908, + "+", + 174 + ] + ], + "md5": "5efa1f2854097ac027e6d02d6ecf0525", + "parent_gene": "", + "protein_md5": "4ab13bfa7f38d4245489085048fe75b8", + "protein_translation": "MALFSKILIFYVIGVNISFVIIWFISHEKTHIRLLSAFLVGITWPMSLPVALLFSLF", + 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"gene_synonym", + "GI:16131959" + ], + [ + "gene_synonym", + "GeneID:948653" + ], + [ + "gene_synonym", + "JW4094" + ], + [ + "gene_synonym", + "NP_418557.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P23890" + ], + [ + "gene_synonym", + "b4133" + ], + [ + "gene_synonym", + "cadC" + ] + ], + "dna_sequence": 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"EcoGene:EG14452" + ], + [ + "gene_synonym", + "GeneID:5625580" + ], + [ + "gene_synonym", + "b4654" + ], + [ + "gene_synonym", + "yjdQ" + ] + ], + "dna_sequence": "CGTGATGCTGTTGAACGTCAAATGACGTCATCAGGAGCGTAACGCATCCATAAAGCACAACACCGGTCTGAACGGCGACTGATGTGAGATTTTCTGAATGAGAACAAAGAGAAATGTATCAGTTCGCTTGCTCATGCAAAGACTAACAATCCATTAAAATAGTAA", + "dna_sequence_length": 165, + "id": "CDS_4053", + "location": [ + [ + "NC_000913", + 4362353, + "-", + 84 + ], + [ + "NC_000913", + 4362271, + "-", + 81 + ] + ], + "md5": "e2c3112dcd5afd34e38631c95adffcc2", + "parent_gene": "", + "protein_md5": "8fdf942b2d01f2162de47e34fcae5f86", + "protein_translation": "RDAVERQMTSSGA", + "protein_translation_length": 13, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013537" + ], + [ + "gene_synonym", + "ECK4129" + ], + [ + "gene_synonym", + "EcoGene:EG12176" + ], + [ + "gene_synonym", + "GI:90111689" + ], + [ + "gene_synonym", + "GeneID:948650" + ], + [ + "gene_synonym", + "JW5733" + ], + [ + "gene_synonym", + "NP_418558.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACU7" + ], + [ + "gene_synonym", + "b4135" + ], + [ + "gene_synonym", + "cutA3" + ], + [ + "gene_synonym", + "yjdC" + ] + ], + "dna_sequence": "GTGCAACGTGAAGATGTACTGGGAGAAGCCCTGAAATTATTAGAATTACAAGGGATTGCCAACACCACGCTGGAGATGGTTGCTGAACGTGTGGATTATCCACTGGACGAGCTACGCCGCTTCTGGCCAGACAAAGAGGCAATCCTCTACGATGCGCTGCGTTATCTTAGCCAACAGATAGATGTCTGGCGTCGTCAGCTGATGCTGGACGAAACGCAAACCGCCGAACAAAAGCTGCTGGCACGTTATCAGGCGTTATCGGAGTGCGTTAAAAACAACCGCTATCCGGGCTGTCTATTTATCGCTGCCTGTACGTTTTATCCCGATCCTGGCCACCCTATTCATCAACTGGCCGATCAGCAAAAAAGCGCGGCCTACGATTTCACCCACGAACTGTTAACCACACTGGAAGTTGACGATCCGGCGATGGTAGCAAAGCAGATGGAACTGGTGCTGGAAGGCTGTTTAAGCCGAATGCTGGTGAATCGTAGCCAGGCGGATGTCGACACTGCACATCGGCTGGCGGAAGATATCCTGCGCTTCGCCCGCTGCCGCCAGGGTGGTGCATTGACCTGA", + "dna_sequence_length": 576, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_4054", + "location": [ + [ + "NC_000913", + 4363308, + "-", + 576 + ] + ], + "md5": "68d569f2f2f3f8994b919cebc5e9c232", + "parent_gene": "", + "protein_md5": "7a4da0ad506c78dfcb5fee428295a804", + "protein_translation": "MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPDKEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKLLARYQALSECVKNNRYPGCLFIAACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRMLVNRSQADVDTAHRLAEDILRFARCRQGGALT", + "protein_translation_length": 191, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013539" + ], + [ + "gene_synonym", + "ECK4130" + ], + [ + "gene_synonym", + "EcoGene:EG12178" + ], + [ + "gene_synonym", + "GI:16131961" + ], + [ + "gene_synonym", + "GeneID:948649" + ], + [ + "gene_synonym", + "JW5734" + ], + [ + "gene_synonym", + "NP_418559.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36655" + ], + [ + "gene_synonym", + "b4136" + ], + [ + "gene_synonym", + "cutA2" + ], + [ + "gene_synonym", + "cycZ" + ], + [ + "gene_synonym", + "dipZ" + ], + [ + "gene_synonym", + "dsbD" + ], + [ + "gene_synonym", + "htrI" + ] + ], + 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"gene_synonym", + "JW5740" + ], + [ + "gene_synonym", + "NP_418586.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A784" + ], + [ + "gene_synonym", + "b4162" + ], + [ + "gene_synonym", + "orn" + ], + [ + "gene_synonym", + "yjeR" + ] + ], + "dna_sequence": "ATGAGTGCCAATGAAAACAACCTGATTTGGATCGATCTTGAGATGACCGGTCTGGATCCCGAGCGCGATCGCATTATTGAGATTGCCACGCTGGTGACCGATGCCAACCTGAATATTCTGGCAGAAGGGCCGACCATTGCAGTACACCAGTCTGATGAACAGCTGGCGCTGATGGATGACTGGAACGTGCGCACCCATACCGCCAGCGGGCTGGTAGAGCGCGTGAAAGCGAGCACGATGGGCGATCGGGAAGCTGAACTGGCAACGCTCGAATTTTTAAAACAGTGGGTGCCTGCGGGAAAATCGCCGATTTGCGGTAACAGCATCGGTCAGGACCGTCGTTTCCTGTTTAAATACATGCCGGAGCTGGAAGCCTACTTCCACTACCGTTATCTCGATGTCAGCACCCTGAAAGAGCTGGCGCGCCGCTGGAAGCCGGAAATTCTGGATGGTTTTACCAAGCAGGGGACGCATCAGGCGATGGATGATATCCGTGAATCGGTGGCGGAGCTGGCTTACTACCGCGAGCATTTTATCAAGCTGTAA", + "dna_sequence_length": 546, + "functions": [ + "oligoribonuclease" + ], + "id": "CDS_4083", + "location": [ + [ + "NC_000913", + 4391604, + "+", + 546 + ] + ], + "md5": 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"CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013657" + ], + [ + "gene_synonym", + "ECK4167" + ], + [ + "gene_synonym", + "EcoGene:EG10595" + ], + [ + "gene_synonym", + "GI:16131993" + ], + [ + "gene_synonym", + "GeneID:948690" + ], + [ + "gene_synonym", + "JW4129" + ], + [ + "gene_synonym", + "NP_418592.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P16384" + ], + [ + "gene_synonym", + "b4171" + ], + [ + "gene_synonym", + "miaA" + ], + [ + "gene_synonym", + "trpX" + ] + ], + "dna_sequence": "ATGAGTGATATCAGTAAGGCGAGCCTGCCTAAGGCGATTTTTTTGATGGGGCCGACGGCCTCCGGTAAAACGGCGTTAGCCATTGAGCTGCGTAAAATTTTACCAGTAGAGTTGATAAGCGTTGATTCTGCCCTTATTTACAAAGGGATGGATATCGGGACGGCGAAGCCGAACGCTGAAGAGTTACTCGCCGCGCCGCACCGATTGCTGGATATTCGCGATCCGTCGCAGGCTTACTCGGCTGCTGATTTTCGCCGCGATGCGCTGGCGGAAATGGCCGATATCACCGCGGCGGGGCGGATCCCACTGTTAGTGGGCGGTACGATGTTGTATTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCGTCGGCAGACCCGGAAGTACGGGCCAGAATTGAGCAACAGGCGGCAGAGCAAGGTTGGGAGTCATTGCATCGTCAACTTCAGGAGGTAGATCCGGTTGCGGCAGCAAGGATTCATCCAAATGATCCACAAAGGCTTTCCCGGGCACTGGAAGTTTTTTTCATTTCGGGTAAAACTTTAACGGAACTGACGCAAACGTCAGGAGACGCTCTACCGTATCAGGTGCATCAGTTCGCCATCGCCCCGGCGAGCCGTGAACTGCTCCATCAACGCATTGAGCAGCGTTTTCATCAGATGTTGGCTTCAGGTTTTGAAGCAGAAGTCCGGGCGCTTTTTGCCCGAGGAGATTTGCATACGGACTTGCCTTCCATTCGTTGCGTGGGTTATCGCCAGATGTGGTCTTACCTTGAAGGCGAAATCTCATACGATGAAATGGTTTATCGAGGTGTTTGCGCCACGAGACAGTTGGCGAAGCGGCAGATAACCTGGCTGCGTGGTTGGGAAGGGGTTCACTGGCTTGACAGTGAAAAACCAGAACAGGCGCGTGACGAAGTATTACAGGTTGTTGGTGCTATCGCAGGCTGA", + "dna_sequence_length": 951, + "functions": [ + "delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase" + ], + "id": "CDS_4090", + "location": [ + [ + "NC_000913", + 4399252, + "+", + 951 + ] + ], + "md5": "0c70c58555c861eb296e8d868ffc88e2", + "parent_gene": "", + "protein_md5": "8e358f58a28e9ec776e56694d4714216", + "protein_translation": "MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIAG", + "protein_translation_length": 316, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013659" + ], + [ + "gene_synonym", + "ECK4168" + ], + [ + "gene_synonym", + "EcoGene:EG10438" + ], + [ + "gene_synonym", + "GI:16131994" + ], + [ + "gene_synonym", + "GeneID:948689" + ], + [ + "gene_synonym", + "JW4130" + ], + [ + "gene_synonym", + "NP_418593.1" + 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"gene_synonym", + "JW4134" + ], + [ + "gene_synonym", + "NP_418597.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF73" + ], + [ + "gene_synonym", + "b4176" + ], + [ + "gene_synonym", + "yjeT" + ] + ], + "dna_sequence": "ATGAATTCGACAATCTGGCTGGCGCTTGCCCTGGTTTTGGTACTGGAAGGTTTAGGGCCGATGCTTTACCCGAAGGCATGGAAGAAGATGATCTCTGCGATGACCAATTTGCCCGATAATATTTTACGTCGTTTTGGCGGTGGACTTGTGGTTGCGGGCGTTGTGGTCTACTACATGTTGAGGAAAACGATTGGCTGA", + "dna_sequence_length": 198, + "functions": [ + "DUF2065 family protein" + ], + "id": "CDS_4095", + "location": [ + [ + "NC_000913", + 4404386, + "+", + 198 + ] + ], + "md5": "e911adc8614a6527cf467961a9517b97", + "parent_gene": "", + "protein_md5": "50ba39a5e7587e96d30d0fca5fd4db4b", + "protein_translation": "MNSTIWLALALVLVLEGLGPMLYPKAWKKMISAMTNLPDNILRRFGGGLVVAGVVVYYMLRKTIG", + "protein_translation_length": 65, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013672" + ], + [ + "gene_synonym", + "ECK4173" + ], + [ + "gene_synonym", + 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"ATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAGCATATTCGTGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGAAATTAAGTCACGATAAGCTGAAAGATTTACGTGAGCGCAAAGCCAGTCTGGAAGCCCGTGCGCTGGAAGCGTTAAGCAAGAACGTTAATCCGTCGTTGATTAACGAAGTTGCTGAAGAAATCGCGCGCCTTGAGAATCTCATTACCGCTGAAGAGCAAGTGTTGTCGAATCTGGAAGTCTCCCGTGATGGCGTGGAAAAAGCAGTTACAGCGACAGCGCAGCGTATCGCTCAGTTTGAGCAGCAAATGGAAGTCGTTAAAGCCACTGAAGCCATGCAGCGTGCACAACAGGCTGTAACAACCTCTACCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAACGCCTGCAAACGCGTCAGGCCGAACGTCAGGCTCGCCTGGATGCTGCCGCACAGTTGGAGAAAGTCGCAGACGGTCGCGACCTTGACGAAAAGCTGGCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAA", + "dna_sequence_length": 699, + "functions": [ + "PspA/IM30 family protein" + ], + "id": "CDS_4101", + "location": [ + [ + "NC_000913", + 4410553, + "+", + 699 + ] + ], + "md5": "f10281a1296cbedc2d32ae00c5ff3039", + "parent_gene": "", + "protein_md5": "1a57bb4e9510d192b7cfdbeb63f0fd04", + 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"MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDELLIALPGEEFTVAAVSHIDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYEESYGISKESHWREAINAKAMGAMTLNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNHAKWEVHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHIIG", + "protein_translation_length": 219, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013694" + ], + [ + "gene_synonym", + "ECK4180" + ], + [ + "gene_synonym", + "EcoGene:EG12487" + ], + [ + "gene_synonym", + "GI:16132006" + ], + [ + "gene_synonym", + "GeneID:948701" + ], + [ + "gene_synonym", + "JW4142" + ], + [ + "gene_synonym", + "NP_418605.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF80" + ], + [ + "gene_synonym", + "b4184" + ], + [ + "gene_synonym", + "yjfL" + ] + ], + "dna_sequence": "ATGCATATACTGGATTCACTTCTTGCCTTTAGCGCCTATTTTTTTATTGGCGTGGCTATGGTGATTATTTTTCTGTTTATCTATTCTAAAATTACACCGCACAACGAATGGCAGTTAATCAAAAACAATAATACCGCGGCGTCACTGGCGTTCAGCGGTACATTGTTGGGTTACGTTATCCCCTTATCCAGTGCGGCAATCAATGCGGTGAGTATTCCAGACTATTTCGCCTGGGGCGGGATTGCACTGGTGATTCAGTTACTCGTTTTTGCTGGTGTCAGACTTTATATGCCCGCATTAAGCGAAAAAATTATTAATCACAATACCGCAGCAGGAATGTTTATGGGAACCGCCGCGCTGGCTGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAA", + "dna_sequence_length": 399, + "functions": [ + "UPF0719 family inner membrane protein" + ], + "id": "CDS_4103", + "location": [ + [ + "NC_000913", + 4411979, + "+", + 399 + ] + ], + "md5": "47623a4e7271481bbcff2f3f58342b41", + "parent_gene": "", + "protein_md5": "9aa45ee7f805e22a5ebb8154609c2108", + "protein_translation": "MHILDSLLAFSAYFFIGVAMVIIFLFIYSKITPHNEWQLIKNNNTAASLAFSGTLLGYVIPLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSEKIINHNTAAGMFMGTAALAGGIFNAACMTW", + "protein_translation_length": 132, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013696" + ], + [ + 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"MARKRKSRNNSKIGHGAISRIGRPNNPFEPCRNRYAQKYLTLALMGGAAFFVLKGCSDSSDVDNDGDGTFYATVQDCIDDGNNADICARGWNNAKTAFYADVPKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRPVWRSTSGDYSWRSGSGKKESYSSGGFTTKKASTVSRGGYGRSSSARGHWGG", + "protein_translation_length": 212, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013698" + ], + [ + "gene_synonym", + "ECK4182" + ], + [ + "gene_synonym", + "EcoGene:EG11812" + ], + [ + "gene_synonym", + "GI:16132008" + ], + [ + "gene_synonym", + "GeneID:948699" + ], + [ + "gene_synonym", + "JW4144" + ], + [ + "gene_synonym", + "NP_418607.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33222" + ], + [ + "gene_synonym", + "b4186" + ], + [ + "gene_synonym", + "yjfC" + ] + ], + "dna_sequence": "ATGCTGAGACACAACGTTCCTGTGCGACGGGATCTGGACCAGATCGCCGCTGACAACGGTTTCGACTTTCATATCATCGACAATGAAATCTATTGGGATGAGAGTCGGGCTTACCGTTTTACTCTGCGCCAGATTGAAGAGCAGATCGAAAAACCGACTGCGGAACTGCATCAGATGTGCCTTGAGGTGGTGGATCGCGCGGTAAAAGATGAAGAGATCCTGACGCAACTGGCGATCCCGCCGTTGTACTGGGATGTGATCGCTGAAAGCTGGCGCGCCCGCGATCCTTCGCTGTATGGACGGATGGATTTTGCCTGGTGTGGCAATGCGCCGGTGAAGCTGCTGGAGTACAACGCCGATACGCCAACTTCATTGTACGAGTCGGCTTATTTCCAGTGGCTGTGGCTGGAGGATGCCCGGCGCAGCGGCATTATTCCGCGTGATGCCGATCAGTACAATGCTATTCAGGAACGCCTGATTTCACGCTTTAGCGAGCTTTACAGTCGGGAACCGTTTTATTTTTGCTGCTGTCAGGACACCGATGAAGACAGGAGTACCGTGCTGTACTTGCAGGACTGCGCCCAGCAGGCAGGGCAGGAGTCGCGGTTTATCTACATTGAAGATCTCGGTTTGGGCGTCGGCGGCGTACTGACCGATCTTGATGATAATGTCATCCAGCGTGCATTTAAGCTGTATCCGCTGGAGTGGATGATGCGTGACGATAACGGTCCGCTGCTGCGCAAGCGTCGCGAGCAATGGGTGGAGCCGTTATGGAAAAGTATCTTGAGTAATAAAGGGCTAATGCCGCTGCTTTGGCGCTTCTTCCCTGGTCATCCTAATCTTCTTGCGTCCTGGTTCGATGGCGAGAAACCGCAGATTGCCGCTGGCGAAAGCTATGTGCGTAAACCAATCTATTCGCGCGAAGGCGGCAACGTCACCATTTTTGACGGCAAGAATAACGTTGTTGACCACGCTGATGGTGATTACGCCGATGAACCGATGATCTACCAGGCGTTTCAACCTCTGCCGCGGTTTGGCGATAGCTACACACTCATCGGTAGCTGGATTGTCGATGATGAAGCGTGCGGAATGGGGATCCGTGAAGATAACACACTGATCACCAAAGACACCTCACGTTTCGTTCCGCATTACATTGCTGGATAA", 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+ ], + [ + "gene_synonym", + "JW5867" + ], + [ + "gene_synonym", + "NP_418608.6" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P33224" + ], + [ + "gene_synonym", + "aidB" + ], + [ + "gene_synonym", + "b4187" + ] + ], + "dna_sequence": "GTGCACTGGCAAACTCACACCGTTTTTAATCAACCTATACCATTAAATAACAGCAACTTATACCTGTCTGATGGCGCGCTCTGCGAAGCGGTAACGCGTGAAGGTGCTGGCTGGGATAGCGATTTTCTAGCCAGTATTGGTCAGCAGTTAGGAACGGCTGAATCCCTTGAACTGGGGCGGCTGGCGAATGTGAATCCGCCTGAATTATTGCGCTACGATGCGCAAGGACGCCGTCTGGACGATGTGCGTTTTCACCCCGCCTGGCACCTGCTGATGCAGGCGCTATGTACCAATCGGGTGCACAATCTTGCCTGGGAAGAAGACGCTCGCTCCGGCGCATTTGTGGCGCGCGCGGCGCGTTTTATGTTACATGCGCAGGTTGAGGCAGGGTCGTTATGTCCGATAACCATGACCTTTGCCGCCACGCCATTGTTGTTACAGATGTTACCCGCGCCGTTTCAGGACTGGACCACGCCGCTATTGAGCGATCGCTACGATTCTCACTTATTGCCAGGTGGGCAAAAACGCGGTTTGTTGATTGGCATGGGAATGACGGAAAAGCAGGGCGGTTCCGATGTTATGAGCAACACCACCCGTGCAGAGCGTCTGGAAGATGGCTCTTATCGGCTGGTGGGGCATAAATGGTTTTTCTCGGTTCCGCAAAGCGATGCGCATCTGGTGCTGGCGCAGACCGCGGGTGGTCTGTCCTGCTTTTTTGTGCCGCGCTTTTTGCCTGACGGGCAACGCAACGCGATTCGCCTCGAGCGGCTGAAAGATAAGCTGGGTAATCGCTCTAACGCCAGTTGCGAAGTGGAGTTTCAGGATGCCATTGGTTGGTTGTTGGGGCTGGAAGGGGAAGGAATTCGTCTGATCCTGAAAATGGGTGGGATGACGCGTTTTGATTGCGCCCTGGGTAGCCATGCCATGATGCGCCGTGCATTTTCGCTGGCGATTTATCATGCACATCAACGCCATGTTTTTGGTAATCCATTGATCCAACAGCCCCTTATGCGTCATGTCTTAAGTCGCATGGCACTTCAGCTTGAAGGGCAAACGGCGTTGCTGTTTCGTCTTGCGCGAGCGTGGGACCGGCGTGCCGATGCCAAAGAAGCCCTGTGGGCGCGTTTATTTACGCCTGCGGCAAAATTTGTGATCTGCAAAAGAGGTATGCCGTTTGTGGCCGAAGCGATGGAGGTGCTGGGCGGCATTGGTTATTGCGAGGAGAGTGAGCTGCCGCGGCTTTACCGGGAGATGCCGGTAAACAGTATTTGGGAAGGTTCCGGCAATATTATGTGCCTGGATGTGTTGCGCGTTCTCAATAAGCAAGCGGGCGTATACGACTTATTGTCGGAAGCATTTGTGGAAGTGAAAGGGCAGGATCGCTATTTTGATCGCGCGGTTCGTCGTTTACAGCAGCAGCTGCGTAAGCCAGCTGAAGAACTGGGGCGAGAGATTACTCATCAGCTATTCCTGCTGGGCTGCGGTGCGCAAATGTTGAAATATGCTTCTCCGCCAATGGCGCAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAA", 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"MAYRDQPLGELALSIPRASALFRKYDMDYCCGGKQTLARAAARKELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVERVHADKPSVPKGLTKYLTMLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEHDEAGELLEVIKHTTNNVTPPPEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALAGE", + "protein_translation_length": 220, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013769" + ], + [ + "gene_synonym", + "ECK4206" + ], + [ + "gene_synonym", + "EcoGene:EG12506" + ], + [ + "gene_synonym", + "GI:226524763" + ], + [ + "gene_synonym", + "GeneID:948732" + ], + [ + "gene_synonym", + "JW4168" + ], + [ + "gene_synonym", + "NP_418631.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39314" + ], + [ + "gene_synonym", + "b4210" + ], + [ + "gene_synonym", + "ytfF" + ] + ], + "dna_sequence": 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"NP_418632.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39315" + ], + [ + "gene_synonym", + "b4211" + ], + [ + "gene_synonym", + "qor2" + ], + [ + "gene_synonym", + "qorB" + ], + [ + "gene_synonym", + "ytfG" + ] + ], + "dna_sequence": 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"NC_000913", + 4434024, + "-", + 861 + ] + ], + "md5": "560e7a864648ce094e2a25644de9ea80", + "parent_gene": "", + "protein_md5": "49d6a9721b414222d55df6076d44f5eb", + "protein_translation": "MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTTTLAESVSHLFNVNN", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013777" + ], + [ + "gene_synonym", + "ECK4208" + ], + [ + "gene_synonym", + "EcoGene:EG12508" + ], + [ + "gene_synonym", + "GI:90111706" + ], + [ + "gene_synonym", + "GeneID:948730" + ], + [ + "gene_synonym", + "JW5747" + ], + [ + "gene_synonym", + "NP_418633.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ACN2" + ], + [ + "gene_synonym", + "b4212" + ], + [ + "gene_synonym", + "ytfH" + ] + ], + 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"uncharacterized protein" + ], + "id": "CDS_4134", + "location": [ + [ + "NC_000913", + 4437707, + "+", + 939 + ] + ], + "md5": "5c786bd88e5ee49a9f54a8af5de78c42", + "parent_gene": "", + "protein_md5": "f6148e0cc56bc9efbb6c5f5ea5cd2a4c", + "protein_translation": "MLPRIRHNNFIGAVELFVKSSYTKTHSNNFFNNIHHAFKKKDWISNYDSLLTLREFFRCATQIDKSGYQVLSSKNETVHAMDKFLISFSLKDNGAEYTMTLRGSGFEYEEIPITINEYNSFMDFKNREFPLEQNRRLYAWDILQKKQSDIPKRIKGYIHQAIGDVSLGYALLEDIVSKLKRGKFELQIPGGGIKECDGWYIYEKIIDDNFAIVIESLGFALKIYGGDERFRNGSSVVLEDEDYSLIYNFLVNAGCQQVELAEQVDAIVSANLAADSDITKEKICEKYKSTIEAFKKEQLALPVLVRRKNSET", + "protein_translation_length": 312, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013792" + ], + [ + "gene_synonym", + "ECK4212" + ], + [ + "gene_synonym", + "EcoGene:EG12510" + ], + [ + "gene_synonym", + "GI:16132038" + ], + [ + "gene_synonym", + "GeneID:948737" + ], + [ + "gene_synonym", + "JW4175" + ], + [ + "gene_synonym", + "NP_418637.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39187" + ], + [ + "gene_synonym", + "b4216" + ], + [ + "gene_synonym", + "ecfJ" + ], + [ + "gene_synonym", + "ytfJ" + ] + ], + "dna_sequence": "ATGACCCTACGCAAGATTCTGGCACTCACCTGCCTGCTGTTGCCGATGATGGCTTCCGCACATCAGTTCGAAACCGGTCAGCGAGTGCCGCCGATTGGCATTACCGATCGGGGCGAGTTGGTGCTTGATAAAGATCAGTTTAGCTACAAAACCTGGAACAGCGCGCAGTTAGTGGGAAAAGTGCGAGTACTGCAACATATTGCTGGTCGCACCTCTGCAAAAGAGAAAAACGCGACGCTGATTGAAGCGATTAAATCAGCGAAGTTACCGCACGATCGTTACCAGACCACCACCATTGTTAACACCGACGACGCGATTCCGGGTTCAGGGATGTTTGTGCGCAGCAGTCTGGAGAGTAATAAAAAGCTTTATCCCTGGTCGCAGTTTATTGTCGATAGCAATGGCGTCGCGCTCGGTGCCTGGCAGCTGGATGAAGAAAGTTCCGCTGTAGTGGTGCTGGATAAGGATGGTCGCGTGCAATGGGCCAAAGACGGGGCGCTCACACCGGAAGAGGTGCAGCAAGTGATGGACCTGCTGCAAAAGTTGCTCAAATAA", + "dna_sequence_length": 555, + "functions": [ + "putative transcriptional regulator" + ], + "id": "CDS_4135", + "location": [ + [ + "NC_000913", + 4439262, + "-", + 555 + ] + ], + "md5": "a637e28ba001284285ef70eda9a6f162", + "parent_gene": "", + "protein_md5": "f8eb7acc179b506e41e4e914ad78684f", + "protein_translation": "MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTDDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVALGAWQLDEESSAVVVLDKDGRVQWAKDGALTPEEVQQVMDLLQKLLK", + "protein_translation_length": 184, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013797" + ], + [ + "gene_synonym", + "ECK4213" + ], + [ + "gene_synonym", + "EcoGene:EG12511" + ], + [ + "gene_synonym", + "GI:90111707" + ], + [ + "gene_synonym", + "GeneID:948736" + ], + [ + "gene_synonym", + "JW5749" + ], + [ + "gene_synonym", + "NP_418638.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADE2" + ], + [ + "gene_synonym", + "b4217" + ], + [ + "gene_synonym", + "ytfK" + ] + ], + "dna_sequence": "ATGAAAATTTTCCAACGGTACAACCCACTTCAGGTGGCGAAGTACGTAAAGATCCTGTTCCGTGGACGGTTATACATCAAGGACGTTGGCGCTTTTGAATTCGATAAGGGTAAGATTCTTATCCCAAAAGTGAAGGATAAGCTGCATTTGTCAGTGATGTCCGAAGTTAACCGTCAGGTTATGCGTCTGCAAACAGAGATGGCTTAA", + "dna_sequence_length": 207, + "functions": [ + "DUF1107 family protein" + ], + "id": "CDS_4136", + "location": [ + [ + "NC_000913", + 4439587, + "+", + 207 + ] + ], + "md5": "6a0a73b2a7d78259c4e9b812ab561e3c", + "parent_gene": "", + "protein_md5": "6368f0cdf1a01dc384e1c2397a7d71e6", + "protein_translation": "MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKVKDKLHLSVMSEVNRQVMRLQTEMA", + "protein_translation_length": 68, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013799" + ], + [ + "gene_synonym", + "ECK4214" + ], + [ + "gene_synonym", + "EcoGene:EG12512" + ], + [ + "gene_synonym", + "GI:16132040" + ], + [ + "gene_synonym", + "GeneID:948735" + ], + [ + "gene_synonym", + "JW4177" + ], + [ + "gene_synonym", + "NP_418639.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AE45" + ], + [ + "gene_synonym", + "b4218" + ], + [ + "gene_synonym", + "ytfL" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:16132041" + ], + [ + "gene_synonym", + "GeneID:948734" + ], + [ + "gene_synonym", + "JW4178" + ], + [ + "gene_synonym", + "NP_418640.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A744" + ], + [ + "gene_synonym", + "b4219" + ], + [ + "gene_synonym", + "msrA" + ], + [ + "gene_synonym", + "pms" + ], + [ + "gene_synonym", + "pmsR" + ] + ], + "dna_sequence": 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"UniProtKB/Swiss-Prot:Q6BEX0" + ], + [ + "gene_synonym", + "YP_026286.1" + ], + [ + "gene_synonym", + "b4485" + ], + [ + "gene_synonym", + "ytfR" + ], + [ + "gene_synonym", + "ytfS" + ] + ], + "dna_sequence": 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"JW5754" + ], + [ + "gene_synonym", + "NP_418652.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37772" + ], + [ + "gene_synonym", + "b4231" + ], + [ + "gene_synonym", + "yjfF" + ] + ], + "dna_sequence": 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"gene_synonym", + "NP_418654.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37773" + ], + [ + "gene_synonym", + "b4233" + ], + [ + "gene_synonym", + "mpl" + ], + [ + "gene_synonym", + "tpl" + ], + [ + "gene_synonym", + "yjfG" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG11410" + ], + [ + "gene_synonym", + "GI:16132056" + ], + [ + "gene_synonym", + "GeneID:948751" + ], + [ + "gene_synonym", + "JW4193" + ], + [ + "gene_synonym", + "NP_418655.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A8X0" + ], + [ + "gene_synonym", + "b4234" + ], + [ + "gene_synonym", + "yjgA" + ] + ], + "dna_sequence": "ATGACTAAGCAGCCCGAAGACTGGCTCGACGACGTTCCCGGTGATGACATCGAAGACGAAGACGATGAAATTATCTGGGTCAGTAAAAGTGAAATTAAACGTGATGCCGAGGAGCTAAAACGCCTTGGCGCGGAAATTGTTGATCTGGGGAAAAACGCGCTGGATAAGATCCCGTTAGATGCGGATCTGCGCGCGGCTATTGAGCTCGCCCAGCGTATTAAGATGGAAGGTCGCCGCCGCCAGTTGCAGCTCATCGGTAAGATGCTGCGCCAGCGCGACGTAGAGCCTATTCGTCAGGCGCTGGATAAGCTGAAAAACCGTCACAACCAGCAGGTGGTGCTGTTCCATAAACTGGAAAACCTGCGCGATCGTCTGATCGATCAAGGTGATGACGCCATCGCTGAGGTATTAAATCTGTGGCCCGATGCCGATCGTCAGCAACTGCGTACTCTGATCCGCAACGCGAAGAAAGAGAAAGAAGGGAATAAGCCGCCGAAATCCGCACGCCAGATTTTCCAGTATCTGCGCGAGTTAGCGGAGAACGAAGGGTAA", + "dna_sequence_length": 552, + "functions": [ + "ribosome-associated UPF0307 family protein" + ], + "id": "CDS_4151", + "location": [ + [ + "NC_000913", + 4457865, + "-", + 552 + ] + ], + "md5": "e1f9c6ee32ac4e4f2fe655f39d3a9b7c", + "parent_gene": "", + "protein_md5": "9718f16e2e82da45c9a8064a1edf0d72", + "protein_translation": "MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGAEIVDLGKNALDKIPLDADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALDKLKNRHNQQVVLFHKLENLRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKEGNKPPKSARQIFQYLRELAENEG", + "protein_translation_length": 183, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013854" + ], + [ + "gene_synonym", + "ECK4230" + ], + [ + "gene_synonym", + "EcoGene:EG10741" + ], + [ + "gene_synonym", + "GI:16132057" + ], + [ + "gene_synonym", + "GeneID:948750" + ], + [ + "gene_synonym", + "JW4194" + ], + [ + "gene_synonym", + "NP_418656.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AFK0" + ], + [ + "gene_synonym", + "b4235" + ], + [ + "gene_synonym", + "mcb" + ], + [ + "gene_synonym", + "pmbA" + ], + [ + "gene_synonym", + "tldE" + ] + ], + "dna_sequence": 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"EcoGene:EG50008" + ], + [ + "gene_synonym", + "GeneID:948758" + ], + [ + "gene_synonym", + "JW4195" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ABE7" + ], + [ + "gene_synonym", + "b4236" + ], + [ + "gene_synonym", + "cybC" + ] + ], + "dna_sequence": "ATTCTTGCAGTCTCCTCGTTGGTATTCAGTTCGGCGTCATTTGCTGCTGATCTCGAAGACAATATGGAAACCCTCAACGACAATTTAAAAGTGGTCGAAAAAGCCGATAACGCGGCGCAAGTCAAAGACGCGTTAACGAAGATGCGCGCCGCAGCGCTGGATGCGCAAAAAGCAACGCCGCCGAAGCTCGAAGATAAATCACCGGACAGCCCGGAAATGAAAGATTTCCGCCACGGTTTCGACATTCTGGTCGGTCAGATTGACGACGCGCTGAAGCTGGCAAATGAAGGTAAAGTAAAAGAAGCGCAGGCTGCTGCAGAGCAACTGAAAACGACCCGCAATTCATATCACAAGAAGTATCGTTAA", + "dna_sequence_length": 366, + "id": "CDS_4153", + "location": [ + [ + "NC_000913", + 4459490, + "+", + 366 + ] + ], + "md5": "9256a449cbac338ecc7401d03d7697d7", + "parent_gene": "", + "protein_md5": "a00cd79ee0d295ab2d760b6670fea22a", + "protein_translation": "ILAVSSLVFSSASFAADLEDNMETLNDNLKVVEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNSYHKKYR", + "protein_translation_length": 121, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013860" + ], + [ + "gene_synonym", + "ECK4232" + ], + [ + "gene_synonym", + "EcoGene:EG12523" + ], + [ + "gene_synonym", + "GI:16132059" + ], + [ + "gene_synonym", + "GeneID:948757" + ], + [ + "gene_synonym", + "JW4196" + ], + [ + "gene_synonym", + "NP_418658.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9N8" + ], + [ + "gene_synonym", + "b4237" + ], + [ + "gene_synonym", + "nrdG" + ], + [ + "gene_synonym", + "yjgE" + ] + ], + "dna_sequence": "ATGAATTATCATCAGTACTATCCTGTCGACATCGTCAACGGCCCCGGCACTCGTTGCACCCTGTTTGTCTCCGGGTGTGTTCATGAATGCCCCGGTTGCTATAACAAAAGCACATGGCGGGTAAATTCCGGTCAGCCATTTACCAAAGCAATGGAAGACCAGATCATTAACGATCTGAATGACACTCGTATCAAACGCCAGGGTATTTCCCTCTCCGGCGGCGATCCGCTGCATCCGCAAAACGTGCCGGATATTCTGAAACTGGTACAACGCATCCGCGCCGAGTGTCCGGGTAAAGACATCTGGGTGTGGACAGGCTATAAACTCGACGAACTCAACGCTGCGCAAATGCAGGTTGTTGATTTGATTAACGTGCTGGTCGACGGCAAATTTGTGCAGGATTTAAAAGACCCTTCCCTGATCTGGCGCGGCAGCAGCAATCAGGTGGTGCATCATTTGCGATGA", + "dna_sequence_length": 465, + "functions": [ + "anaerobic ribonucleotide reductase activating protein" + ], + "id": "CDS_4154", + "location": [ + [ + "NC_000913", + 4460364, + "-", + 465 + ] + ], + "md5": "6f3fb4ee8686a9bcf76c6d2a8af48455", + "parent_gene": "", + "protein_md5": "f0d1233ca95f743a927fe329d7424072", + "protein_translation": "MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSGQPFTKAMEDQIINDLNDTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIWVWTGYKLDELNAAQMQVVDLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR", + "protein_translation_length": 154, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013865" + ], + [ + "gene_synonym", + "ECK4233" + ], + [ + "gene_synonym", + "EcoGene:EG11417" + ], + [ + "gene_synonym", + "GI:16132060" + ], + [ + "gene_synonym", + "GeneID:948755" + ], + [ + "gene_synonym", + "JW4197" + ], + [ + "gene_synonym", + "NP_418659.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28903" + ], + [ + "gene_synonym", + "b4238" + ], + [ + "gene_synonym", + "nrdD" + ] + ], + "dna_sequence": 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"MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAAVVSEQMQGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEIRGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIHYHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAIRDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWENENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLEGVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVYDNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYPNIQHNLKALEDVWDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG", + "protein_translation_length": 712, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013870" + ], + [ + "gene_synonym", + "ECK4234" + ], + [ + "gene_synonym", + "EcoGene:EG11402" + ], + [ + "gene_synonym", + "GI:16132061" + ], + [ + "gene_synonym", + "GeneID:948762" + ], + [ + "gene_synonym", + "JW4198" + ], + [ + "gene_synonym", + "NP_418660.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28904" + ], + [ + "gene_synonym", + "b4239" + ], + [ + "gene_synonym", + "olgH" + ], + [ + "gene_synonym", + "treC" + ], + [ + "gene_synonym", + "treE" + ] + ], + "dna_sequence": 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"gene_synonym", + "ECK4235" + ], + [ + "gene_synonym", + "EcoGene:EG12127" + ], + [ + "gene_synonym", + "GI:16132062" + ], + [ + "gene_synonym", + "GeneID:948761" + ], + [ + "gene_synonym", + "JW4199" + ], + [ + "gene_synonym", + "NP_418661.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P36672" + ], + [ + "gene_synonym", + "b4240" + ], + [ + "gene_synonym", + "treB" + ] + ], + "dna_sequence": 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"trehalose 6-phosphate-inducible trehalose regulon transcriptional repressor" + ], + "id": "CDS_4158", + "location": [ + [ + "NC_000913", + 4467246, + "-", + 948 + ] + ], + "md5": "966375c6e667f57330e056120b2da398", + "parent_gene": "", + "protein_md5": "4bc4e2950a34015dc197c68f8d50b94b", + "protein_translation": "MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQLTRERVEAVMNQHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCATDTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVTGRSEPQQIIIPATLS", + "protein_translation_length": 315, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ECK4513" + ], + [ + "gene_synonym", + "EcoGene:EG14498" + ], + [ + "gene_synonym", + "GI:308209623" + ], + [ + "gene_synonym", + "GeneID:9797237" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:E2JKY7" + ], + [ + "gene_synonym", + "YP_003933616.1" + ], + [ + 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"type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013948" + ], + [ + "gene_synonym", + "ECK4252" + ], + [ + "gene_synonym", + "EcoGene:EG11413" + ], + [ + "gene_synonym", + "GI:16132081" + ], + [ + "gene_synonym", + "GeneID:948787" + ], + [ + "gene_synonym", + "JW4216" + ], + [ + "gene_synonym", + "NP_418680.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P28905" + ], + [ + "gene_synonym", + "b4259" + ], + [ + "gene_synonym", + "holC" + ] + ], + "dna_sequence": "ATGAAAAACGCGACGTTCTACCTTCTGGACAATGACACCACCGTCGATGGCTTAAGCGCCGTTGAGCAACTGGTGTGTGAAATTGCCGCAGAACGTTGGCGCAGCGGTAAGCGCGTGCTCATCGCCTGTGAAGATGAAAAGCAGGCTTACCGGCTGGATGAAGCCCTGTGGGCGCGTCCGGCAGAAAGCTTTGTTCCGCATAATTTAGCGGGAGAAGGACCGCGCGGCGGTGCACCGGTGGAGATCGCCTGGCCGCAAAAGCGTAGCAGCAGCCGGCGCGATATATTGATTAGTCTGCGAACAAGCTTTGCAGATTTTGCCACCGCTTTCACAGAAGTGGTAGACTTCGTTCCTTATGAAGATTCTCTGAAACAACTGGCGCGCGAACGCTATAAAGCCTACCGCGTGGCTGGTTTCAACCTGAATACGGCAACCTGGAAATAA", + "dna_sequence_length": 444, + "functions": [ + "DNA polymerase III, chi subunit" + ], + "id": "CDS_4175", + "location": [ + [ + "NC_000913", + 4484280, + "-", + 444 + ] + ], + "md5": "a8088a80a043dbef8079fa07bf01a0c0", + "parent_gene": "", + "protein_md5": "73e440d3b37bece233f6f8c9b7987fe1", + "protein_translation": "MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSRRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK", + "protein_translation_length": 147, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0013953" + ], + [ + "gene_synonym", + "ECK4253" + ], + [ + "gene_synonym", + "EcoGene:EG10694" + ], + [ + "gene_synonym", + "GI:16132082" + ], + [ + "gene_synonym", + "GeneID:948791" + ], + [ + "gene_synonym", + "JW4217" + ], + [ + "gene_synonym", + "NP_418681.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P68767" + ], + [ + "gene_synonym", + "b4260" + ], + [ + "gene_synonym", + "carP" + ], + [ + "gene_synonym", + "pepA" + ], + [ + "gene_synonym", + "xerB" + ] 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"gene_synonym", + "ASAP:ABE-0013958" + ], + [ + "gene_synonym", + "ECK4254" + ], + [ + "gene_synonym", + "EcoGene:EG12535" + ], + [ + "gene_synonym", + "GI:16132083" + ], + [ + "gene_synonym", + "GeneID:948795" + ], + [ + "gene_synonym", + "JW4218" + ], + [ + "gene_synonym", + "NP_418682.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AF98" + ], + [ + "gene_synonym", + "b4261" + ], + [ + "gene_synonym", + "lptF" + ], + [ + "gene_synonym", + "yjgP" + ] + ], + "dna_sequence": 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[ + "gene_synonym", + "JW5760" + ], + [ + "gene_synonym", + "NP_418683.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADC6" + ], + [ + "gene_synonym", + "b4262" + ], + [ + "gene_synonym", + "lptG" + ], + [ + "gene_synonym", + "yjgQ" + ] + ], + "dna_sequence": 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"gene_synonym", + "JW4220" + ], + [ + "gene_synonym", + "NP_418684.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39342" + ], + [ + "gene_synonym", + "b4263" + ], + [ + "gene_synonym", + "yjgR" + ] + ], + "dna_sequence": "ATGAGTGAACCCCTGTTAATTGCCCGCACGCCGGACACAGAACTGTTTTTACTGCCGGGAATGGCTAACCGTCATGGGCTGATTACCGGCGCAACGGGGACGGGTAAAACCGTTACGCTGCAAAAACTGGCGGAGTCATTGTCGGAAATCGGCGTGCCGGTGTTTATGGCTGATGTGAAAGGCGATCTGACCGGCGTCGCGCAGGCAGGAACGGTGTCGGAAAAACTGCTCGCAAGGCTTAAAAATATCGGCGTCAATGACTGGCAACCGCATGCCAATCCGGTGGTGGTGTGGGATATCTTTGGCGAGAAAGGCCATCCGGTGCGGGCGACGGTTTCGGATCTGGGGCCGCTGTTGCTGGCACGACTGTTGAATCTCAACGATGTGCAATCTGGCGTGCTGAATATCATCTTCCGCATTGCTGACGATCAGGGGCTGTTACTGCTCGACTTTAAAGATCTGCGGGCAATTACCCAGTACATCGGCGATAACGCCAAATCCTTCCAGAATCAGTACGGTAATATCAGTAGCGCATCGGTTGGTGCCATCCAGCGCGGGCTGTTGTCGCTGGAACAGCAAGGCGCAGCACACTTCTTTGGTGAGCCGATGCTGGATATCAAAGACTGGATGCGCACCGATGCCAACGGTAAAGGCGTTATCAATATCCTCAGCGCCGAGAAACTTTATCAGATGCCGAAACTGTACGCCGCCAGCCTGCTGTGGATGCTTTCAGAGTTGTATGAACAATTGCCGGAAGCGGGCGATCTGGAGAAACCAAAACTGGTGTTTTTCTTCGACGAGGCACATCTGCTGTTTAACGATGCCCCGCAGGTACTGCTGGATAAGATTGAGCAGGTGATAAGGCTTATTCGCTCAAAAGGCGTGGGCGTCTGGTTCGTTTCGCAAAACCCGTCTGATATTCCGGATAATGTGCTCGGGCAGCTCGGTAATCGCGTTCAACATGCTTTGCGGGCTTTTACGCCAAAAGATCAGAAAGCAGTGAAGGCAGCGGCGCAAACCATGCGGGCCAATCCGGCGTTTGATACCGAAAAGGCGATTCAGGAACTGGGCACCGGCGAGGCGTTGATCTCTTTTCTGGATGCGAAAGGAAGCCCTTCTGTGGTGGAGCGTGCGATGGTGATCGCGCCTTGTTCGCGGATGGGGCCGGTGACGGAAGATGAGCGTAATGGCTTGATTAATCACTCTCCGGTGTATGGCAAATATGAGGATGAGGTGGACCGGGAATCCGCCTATGAGATGTTGCAAAAAGGCTTTCAGGCCAGTACCGAGCAGCAAAATAATCCTCCCGCGAAAGGGAAAGAGGTAGCGGTGGATGACGGCATTCTTGGTGGATTGAAGGATATTTTGTTCGGCACTACCGGACCACGCGGCGGGAAGAAAGATGGTGTGGTGCAAACAATGGCCAAAAGCGCCGCTCGCCAAGTGACGAATCAGATTGTACGCGGGATGTTGGGGAGTTTGCTGGGGGGGAGAAGAAGGTAA", 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"JW4225" + ], + [ + "gene_synonym", + "NP_418689.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39208" + ], + [ + "gene_synonym", + "b4268" + ], + [ + "gene_synonym", + "gntV" + ], + [ + "gene_synonym", + "idnK" + ] + ], + "dna_sequence": "ATGGCGGGTGAAAGCTTTATTTTGATGGGCGTTTCAGGGAGTGGTAAAACATTAATTGGTAGCAAGGTTGCCGCGTTATTATCTGCTAAATTTATTGATGGTGACGATCTTCATCCAGCCAAAAATATAGATAAAATGTCGCAGGGTATTCCATTATCTGATGAAGATCGACTTCCCTGGCTGGAACGCTTAAATGATGCTTCATACAGTCTTTATAAAAAGAATGAAACAGGATTTATTGTCTGTTCATCATTAAAAAAACAGTATCGTGATATTTTACGCAAGGGTAGCCCCCATGTTCATTTCCTCTGGTTAGATGGCGACTATGAAACTATTCTCGCGCGAATGCAGCGTCGGGCTGGGCATTTTATGCCGGTAGCGTTACTAAAAAGTCAGTTTGAGGCACTGGAGCGTCCACAAGCAGATGAACAGGATATTGTGCGCATTGATATCAACCATGATATTGCCAATGTCACCGAACAATGTCGGCAGGCTGTGCTGGCGATACGACAAAACAGAATATGTGCGAAAGAGGGCAGCGCCTCAGATCAGCGCTGCGAATGA", + "dna_sequence_length": 564, + "functions": [ + "D-gluconate kinase, thermosensitive" + ], + "id": "CDS_4184", + "location": [ + [ + "NC_000913", + 4494623, + "+", + 564 + ] + ], + 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"functions": [ + "anti-sigma transmembrane signal transducer for ferric citrate transport", + "periplasmic FecA-bound ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator" + ], + "id": "CDS_4206", + "location": [ + [ + "NC_000913", + 4517717, + "-", + 954 + ] + ], + "md5": "69c305892ce742a9487e370b75a45425", + "parent_gene": "", + "protein_md5": "11bfa25c2ddcd65cb4263b1eab1be190", + "protein_translation": "MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQDNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSETGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNAGESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINISPL", + "protein_translation_length": 317, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014072" + ], + [ + "gene_synonym", + "ECK4283" + ], + [ + "gene_synonym", + "EcoGene:EG10291" + ], + [ + "gene_synonym", + "GI:16132114" + ], 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4518235, + "-", + 522 + ] + ], + "md5": "bced95741ab3705f3187189e54426652", + "parent_gene": "", + "protein_md5": "950bf3a1043701a72038bd6628bf2e3a", + "protein_translation": "MSDRATTTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMVSETLSTIRDPRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPEGGAPSPEERESQLETLQLLDSMLDGLNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKAVEHCLLFRLEYGL", + "protein_translation_length": 173, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014077" + ], + [ + "gene_synonym", + "ECK4562" + ], + [ + "gene_synonym", + "EcoGene:EG40001" + ], + [ + "gene_synonym", + "GI:16132115" + ], + [ + "gene_synonym", + "GeneID:948830" + ], + [ + "gene_synonym", + "NP_418714.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0CF12" + ], + [ + "gene_synonym", + "b4294" + ], + [ + "gene_synonym", + "insA" + ] + ], + "dna_sequence": 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"type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014079" + ], + [ + "gene_synonym", + "ECK4284" + ], + [ + "gene_synonym", + "EcoGene:EG12604" + ], + [ + "gene_synonym", + "GI:90111724" + ], + [ + "gene_synonym", + "GeneID:948827" + ], + [ + "gene_synonym", + "JW5952" + ], + [ + "gene_synonym", + "NP_418715.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39356" + ], + [ + "gene_synonym", + "b4295" + ], + [ + "gene_synonym", + "yjhU" + ] + ], + "dna_sequence": "GTGGATAGAGATCAAACAAACAGCAGCCTGTTCAATGATGATCCCGTACTTCATGCAACATGGCTGTACTATCAGGAAGGCAAAAGCCAGACTGAAGTTGCAGCTATCATGGGGGTGTCCCGCGTCACGGTTGTCAAATACCTGCAAACAGCCCGGGAAAATGGACTGGTTCATATCAACCTGGATGTGAATGTCTTTGGCTCTATCGACGCTGCTTTGCAAATTCGCGATAAATTCAATCTCCAGAGAGTGATCATCGTGCCGGATGGCGAACATGCCGGAAAACGTGATGATACAAAGCTGATGCGGACTCGCCTTTCACGTGCCGGTGGCATGTATCTGAATCAGGTGATTGAGAATGGTGATGTGCTGGGGGTTGCCTGGGGAAGAACAATCCATCAGATGAGCAAAACCATGACGCCGAAGTCATGTAAAAATGTCACCGTTATACAGATGCTCGGTTCCATGCCATCTCAGCCAGACCTGACGATCATTGAATCCTCATCGCAAATCGCCTACAAGCTTTCAGGCCGTGTCGCCTCGCTGCACGTGCCCGCCGTGGTATCAAGCGCCAGACTGGCCATGGAGTTACAGGCAGAGCCTATTATTCGATCGAATTTTGACGTTCTGACTCGCTGTACGAAAGCCTTTTTTGTCGTGGGTAACGCGCTTGATGAAAATCCCCTGATTCGGGTGGGCGTGCTGAATAAGAAGGAAATGCAGACGTATCGGGATTTAGGCGCAGTAGGTGTCATTTGTGGTCGCTTCTATGACAAGGAAGGGATGCCCGTCGTGGCTGATGTTGACCAGCGTATTCTGGGAATCAGTCTGGCTCAGCTAAGGCAGATTGAACGGAAGATCTTCCTTGCTGGTGGGGAAAGAGGCTATGACGCAACGTTGGGTGCCCTGCTGGGAGGATATGTCACGGACCTGATTGTTGATGAAGGAACGGCAGAGTTTTTGCTGGCGTGTGAATTACCACACTAA", + "dna_sequence_length": 987, + "functions": [ + "putative DNA-binding transcriptional regulator", + "KpLE2 phage-like element" + ], + "id": "CDS_4210", + "location": [ + [ + "NC_000913", + 4520324, + "-", + 987 + ] + ], + "md5": "3dac60ca891f833268459dd89e1e1b61", + "parent_gene": "", + "protein_md5": "6c1b608ebee893fcf621d63906ff068a", + "protein_translation": "MDRDQTNSSLFNDDPVLHATWLYYQEGKSQTEVAAIMGVSRVTVVKYLQTARENGLVHINLDVNVFGSIDAALQIRDKFNLQRVIIVPDGEHAGKRDDTKLMRTRLSRAGGMYLNQVIENGDVLGVAWGRTIHQMSKTMTPKSCKNVTVIQMLGSMPSQPDLTIIESSSQIAYKLSGRVASLHVPAVVSSARLAMELQAEPIIRSNFDVLTRCTKAFFVVGNALDENPLIRVGVLNKKEMQTYRDLGAVGVICGRFYDKEGMPVVADVDQRILGISLAQLRQIERKIFLAGGERGYDATLGALLGGYVTDLIVDEGTAEFLLACELPH", + "protein_translation_length": 328, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014084" + ], + [ + "gene_synonym", + "ECK4285" + ], + [ + "gene_synonym", + "EcoGene:EG12548" + ], + [ + "gene_synonym", + "GI:16132117" + ], + [ + "gene_synonym", + "GeneID:949102" + ], + [ + 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"b4321" + ], + [ + "gene_synonym", + "gntP" + ], + [ + "gene_synonym", + "yjiB" + ] + ], + "dna_sequence": "ATGCATGTGCTTAACATTCTCTGGGTGGTATTCGGCATTGGTCTGATGCTGGTACTGAATTTGAAGTTCAAAATCAATTCAATGGTGGCTTTGTTGGTGGCGGCGCTGTCCGTCGGGATGCTGGCGGGCATGGATTTGATGTCGCTGCTGCACACTATGAAAGCGGGCTTCGGCAACACGCTGGGGGAACTGGCTATCATCGTGGTGTTCGGTGCGGTCATCGGTAAATTGATGGTCGACTCCGGCGCGGCTCACCAGATAGCGCATACGCTGCTGGCGCGTCTCGGTCTGCGCTATGTACAGCTGTCGGTGATTATCATCGGCCTGATTTTTGGTCTGGCGATGTTCTATGAAGTGGCCTTTATCATGTTAGCGCCGCTGGTTATTGTTATTGCCGCCGAAGCTAAAATTCCGTTCCTGAAACTGGCGATCCCGGCAGTAGCAGCTGCCACTACCGCACATTCACTGTTCCCACCGCAGCCGGGTCCGGTGGCGCTGGTGAATGCTTATGGCGCGGATATGGGGATGGTTTATATCTATGGCGTACTGGTGACGATCCCAAGTGTAATCTGCGCAGGTCTGATCCTGCCGAAGTTCCTCGGCAATCTTGAGCGCCCAACGCCATCATTCCTGAAAGCAGATCAACCGGTAGATATGAATAATCTGCCCTCTTTCGGCGTTTCGATTCTGGTGCCGCTGATCCCGGCGATCATTATGATCTCTACCACCATCGCCAATATCTGGCTGGTAAAAGATACCCCTGCCTGGGAAGTGGTTAACTTTATCGGTTCCTCGCCGATTGCAATGTTTATTGCGATGGTGGTTGCATTCGTACTCTTTGGCACCGCACGTGGTCATGACATGCAGTGGGTGATGAACGCTTTTGAAAGCGCGGTGAAGAGTATTGCAATGGTGATTCTGATCATCGGTGCGGGTGGCGTGCTGAAGCAGACCATCATCGACACCGGCATTGGCGACACCATCGGCATGTTGATGTCCCACGGCAATATCTCGCCCTACATCATGGCATGGCTGATCACTGTGCTAATTCGTCTGGCGACGGGTCAGGGTGTCGTTTCGGCGATGACCGCCGCCGGGATTATCAGTGCTGCAATCCTAGATCCAGCAACTGGTCAGCTGGTTGGCGTGAATCCGGCGCTGCTGGTACTGGCGACGGCTGCGGGTTCCAACACCCTCACCCACATTAACGATGCATCTTTCTGGTTGTTCAAAGGTTACTTTGACCTGTCAGTAAAAGACACGTTGAAAACCTGGGGTCTGCTGGAGCTGGTCAACTCCGTGGTTGGGCTGATTATTGTGCTGATTATTAGCATGGTAGCGTAA", 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"GI:16132143" + ], + [ + "gene_synonym", + "GeneID:947082" + ], + [ + "gene_synonym", + "JW4285" + ], + [ + "gene_synonym", + "NP_418742.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P24215" + ], + [ + "gene_synonym", + "b4322" + ], + [ + "gene_synonym", + "uxuA" + ] + ], + "dna_sequence": 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esterase" + ], + "id": "CDS_4252", + "location": [ + [ + "NC_000913", + 4563603, + "-", + 861 + ] + ], + "md5": "fde2766f4e54874ca68470cd1c4a69d4", + "parent_gene": "", + "protein_md5": "6d7340cc0d17d974210636b1af7004d3", + "protein_translation": "MTKSISLSKRISIIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTPQSSH", + "protein_translation_length": 286, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014212" + ], + [ + "gene_synonym", + "ECK4325" + ], + [ + "gene_synonym", + "EcoGene:EG12573" + ], + [ + "gene_synonym", + "GI:90111734" + ], + [ + "gene_synonym", + "GeneID:948837" + ], + [ + "gene_synonym", + "JW5785" + ], + [ + "gene_synonym", + "NP_418754.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39383" + ], + [ + "gene_synonym", + 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"NC_000913", + 4568998, + "+", + 921 + ] + ], + "md5": "6cf9a211443c62c1cd503a968cb75f29", + "parent_gene": "", + "protein_md5": "73f87c27c9ac302d9f41682e2f26e6ea", + "protein_translation": "MTNFTTSTPHDALFKTFLTHPDTARDFMEIHLPKDLRELCDLDSLKLESASFVDEKLRALHSDILWSVKTREGDGYIYVVIEHQSREDIHMAFRLMRYSMAVM", + "protein_translation_length": 103, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014232" + ], + [ + "gene_synonym", + "ECK4331" + ], + [ + "gene_synonym", + "EcoGene:EG12579" + ], + [ + "gene_synonym", + "GI:16132161" + ], + [ + "gene_synonym", + "GeneID:949089" + ], + [ + "gene_synonym", + "JW4303" + ], + [ + "gene_synonym", + "NP_418760.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39389" + ], + [ + "gene_synonym", + "b4340" + ], + [ + "gene_synonym", + "yjiR" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0014239" + ], + [ + "gene_synonym", + "ECK4333" + ], + [ + "gene_synonym", + "EcoGene:EG12581" + ], + [ + "gene_synonym", + "GeneID:945056" + ], + [ + "gene_synonym", + "JW5787" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39391" + ], + [ + "gene_synonym", + "b4342" + ], + [ + "gene_synonym", + "yjiT" + ] + ], + "dna_sequence": "TTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACTTTGTGAATCTTAGAGGGTTGAGACAACCGGATGGCCGTCCTCTTTATGAATATCATGCAACCAATGATGAATATACCCAATTAACGCAGCTACTCCGTGCAGTCGGTCAATCACAATCTAATATATGTAATAGGGACTTTGCTGCCTGTTTTGTTCTTTTTTGCTCTGAGTGGTACCGCAGGGATTATGAACGGCAATGCGGATGGACGTGGGACCCTATATATAAAAAAATAGGGATTTCATTCACCGCCACAGAGCTTGGTACTATCGTACCGAAAGGGATGGAAGATTACTGGCTGCGCCCAATTCGATTTTATGAATCTGAACGACGCAATTTTCTCGGAACATTATTCAGTGAAGGTGGTTTACCTTTCCGGCTACTCAAAGAATCAGACAGTCGCTTTCTGGCTGTTTTCTCCAGGATCCTTGGACAATATGAGCAAGCAAAGCAGTCAGGTTTTTCTGCCCTTTCGCTGGCAAGAGCTGTCATAGAAAAATCAGCGCTGCCAACTGTTTTTAGCGAAGATACCTCTGTAGAACTTATCAGTCATATGGCTGATAACCTCAATTCCTTAGTACTTACTCACAACCTAATAAATCACAAAGAACCAGTACAACAGCTTGAGAAGGTTCACCCTACCTGGCGAAGCGAGTTTCCAATACCGTTAGATGATGAAACAGGAACGCATTTTTTGAATGGACTGCTATGCGCAGCCTCTGTAGAGGCTAAGCCTCGACTACAAAAAAATAAGAGTACGCGTTGCCAATTCTATTGGTCAGAAAAGCATCCAGATGAGCTTAGGGTGATAGTATCTCTTCCGGACGAAGTTTCCTTTCCTGTAACAAGCGAGCCGTCAACTACGCGCTTTGAACTTGCCATTTGTGAAGATGGTGAGGAAGTCTCTGGCCTTGGGCCAGCCTATGCTTCTCTGGAAAACAGACAGGCAACAGTTCGATTACGTAAAAGCGAAGTGAGATTTGGCAGGCAAAATCCATCGGCAGGTTTGTCGTTAGTGGCTCGTGCTGGAGGGATGATTGTTGGGAGCATTAAACTTGATGACAGTGAAATTGCCATTGGTGAGGTGCCGTTAACCTTCATCGTTGATGCAGATCAATGGCTGTTACAGGGACAGGCTTCTTGCAGTGTGCGAAGCAGCGATGTTCTGATTGTGCTCCCTCGGGATAATAGCAATGTTGCTGGTTTTGATGGCCAATCGAGGGCAGTAAACGTATTAGGACTAAAAGCACTACCTGTGAAGGGATGTCAGGACGTTACAGTTACAGCAAATGAAACTTATCGGATTCGCACCGGAAGAGAACAAATCAGCATCGGAAGGTTTGCTCTAAATGGAAAGCGTGCAAGCTGGGTTTGTCATCCAGATGAAACATTTATTGGTGTACCAAAAGTCATTTCTACACTACCGGATATTCAAAGCATTGATGTAACG", 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"gene_synonym", + "GeneID:2847669" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39393" + ], + [ + "gene_synonym", + "b4486" + ], + [ + "gene_synonym", + "mcrD" + ], + [ + "gene_synonym", + "yjiU" + ], + [ + "gene_synonym", + "yjiV" + ] + ], + "dna_sequence": 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"GTGGAACAGCCCGTGATACCTGTCCGTAATATCTATTACATGCTTACCTATGCATGGGGTTATTTACAGGAAATTAAGCAGGCAAACCTTGAAGCCATACCCGGTAACAATCTTCTTGATATCCTGGGGTATGTATTAAATAAAGGGGTTTTACAGCTTTCACGCCGAGGGCTTGAGCTTGATTACAATCCTAACACCGAGATCATTCCTGGCATCAAAGGGCGAATAGAGTTTGCTAAAACAATACGCGGCTTCCATCTTAATCATGGGAAAACCGTCAGTACTTTTGATATGCTTAATGAAGACACGCTGGCTAACCGAATTATAAAAAGCACATTAGCCATATTAATTAAGCATGAAAAGTTAAATTCAACTATCAGAGATGAAGCTCGTTCACTTTATAGAAAATTACCGGGCATTAGCACTCTTCATTTAACTCCGCAGCATTTCAGCTATCTGAATGGCGGAAAAAATACGCGTTATTATAAATTCGTTATCAGTGTCTGCAAATTCATCGTCAATAATTCTATTCCAGGTCAAAACAAAGGACACTACCGTTTCTATGATTTTGAAAGAAACGAAAAAGAGATGTCATTACTTTATCAAAAGTTTCTTTATGAATTTTGCCGTCGTGAATTAACGTCTGCAAACACAACCCGCTCTTATTTAAAATGGGATGCATCGAGTATATCGGATCAGTCACTTAATTTGTTACCTCGAATGGAAACTGACATCACCATTCGCTCATCAGAAAAAATACTTATCGTTGACGCCAAATACTATAAGAGCATTTTTTCACGACGAATGGGAACAGAAAAATTTCATTCGCAAAATCTTTATCAACTGATGAATTACTTATGGTCGTTAAAGCCTGAAAATGGCGAAAACATAGGGGGGTTATTAATATATCCCCACGTAGATACCGCAGTGAAACATCGTTATAAAATTAATGGCTTCGATATTGGCTTGTGTACCGTCAATTTAGGTCAGGAATGGCCGTGTATACATCAAGAATTACTCGACATTTTCGATGAATATCTCAAATAA", 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"ECK4340" + ], + [ + "gene_synonym", + "EcoGene:EG10459" + ], + [ + "gene_synonym", + "GI:226524764" + ], + [ + "gene_synonym", + "GeneID:948878" + ], + [ + "gene_synonym", + "JW4313" + ], + [ + "gene_synonym", + "NP_418770.2" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P08956" + ], + [ + "gene_synonym", + "b4350" + ], + [ + "gene_synonym", + "hsdR" + ], + [ + "gene_synonym", + "hsp" + ], + [ + "gene_synonym", + "hsr" + ] + ], + "dna_sequence": 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"functions": [ + "metal-binding GTPase" + ], + "id": "CDS_4269", + "location": [ + [ + "NC_000913", + 4588865, + "-", + 957 + ] + ], + "md5": "e4f613dfa51e26129f5e1f3675c6e1f8", + "parent_gene": "", + "protein_md5": "08af59eb182da08376042bc1a25bb8a7", + "protein_translation": "MNPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKTDVAGEAEKLHERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEENVVSTKPRFHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGVQRLYSADWDRPWGDEKPHSTMVFIGIQLPEEEIRAAFAGLRK", + "protein_translation_length": 318, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014276" + ], + [ + "gene_synonym", + "ECK4343" + ], + [ + "gene_synonym", + "EcoGene:EG12585" + ], + [ + "gene_synonym", + "GI:16132174" + ], + [ + "gene_synonym", + "GeneID:949090" + ], + [ + "gene_synonym", + "JW4316" + ], + [ + "gene_synonym", + "NP_418773.1" + ], + [ + "gene_synonym", 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"GeneID:948884" + ], + [ + "gene_synonym", + "JW4318" + ], + [ + "gene_synonym", + "NP_418775.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P02942" + ], + [ + "gene_synonym", + "b4355" + ], + [ + "gene_synonym", + "cheD" + ], + [ + "gene_synonym", + "tsr" + ] + ], + "dna_sequence": 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"gene_synonym", + "ASAP:ABE-0014284" + ], + [ + "gene_synonym", + "ECK4346" + ], + [ + "gene_synonym", + "EcoGene:EG12588" + ], + [ + "gene_synonym", + "GI:16132177" + ], + [ + "gene_synonym", + "GeneID:948879" + ], + [ + "gene_synonym", + "JW4319" + ], + [ + "gene_synonym", + "NP_418776.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39398" + ], + [ + "gene_synonym", + "b4356" + ], + [ + "gene_synonym", + "lgoT" + ], + [ + "gene_synonym", + "yjiZ" + ], + [ + "gene_synonym", + "yjjL" + ] + ], + "dna_sequence": 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157, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014313" + ], + [ + "gene_synonym", + "ECK4354" + ], + [ + "gene_synonym", + "EcoGene:EG12592" + ], + [ + "gene_synonym", + "GI:90111743" + ], + [ + "gene_synonym", + "GeneID:948812" + ], + [ + "gene_synonym", + "JW5796" + ], + [ + "gene_synonym", + "NP_418784.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADD5" + ], + [ + "gene_synonym", + "b4364" + ], + [ + "gene_synonym", + "yjjP" + ] + ], + "dna_sequence": 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"NP_418788.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P39406" + ], + [ + "gene_synonym", + "b4371" + ], + [ + "gene_synonym", + "rsmC" + ], + [ + "gene_synonym", + "yjjT" + ] + ], + "dna_sequence": 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"MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSHCNSWRLGTDEPLSLEGAQVASPALTDLRANPTARAALWQQICTYEHDFFPRND", + "protein_translation_length": 137, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014342" + ], + [ + "gene_synonym", + "ECK4364" + ], + [ + "gene_synonym", + "EcoGene:EG10850" + ], + [ + "gene_synonym", + "GI:16132191" + ], + [ + "gene_synonym", + "GeneID:948894" + ], + [ + "gene_synonym", + "JW4335" + ], + [ + "gene_synonym", + "NP_418790.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A944" + ], + [ + "gene_synonym", + "b4373" + ], + [ + "gene_synonym", + "rimI" + ] + ], + "dna_sequence": 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"gene_synonym", + "GI:90111746" + ], + [ + "gene_synonym", + "GeneID:948911" + ], + [ + "gene_synonym", + "JW5800" + ], + [ + "gene_synonym", + "NP_418807.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P27278" + ], + [ + "gene_synonym", + "b4390" + ], + [ + "gene_synonym", + "nadI" + ], + [ + "gene_synonym", + "nadR" + ], + [ + "gene_synonym", + "pnuA" + ] + ], + "dna_sequence": 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"gene_synonym", + "EcoGene:EG12343" + ], + [ + "gene_synonym", + "GI:16132208" + ], + [ + "gene_synonym", + "GeneID:948909" + ], + [ + "gene_synonym", + "JW4354" + ], + [ + "gene_synonym", + "NP_418808.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A9W3" + ], + [ + "gene_synonym", + "b4391" + ], + [ + "gene_synonym", + "ettA" + ], + [ + "gene_synonym", + "yjjK" + ] + ], + "dna_sequence": 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"ASAP:ABE-0014404" + ], + [ + "gene_synonym", + "ECK4384" + ], + [ + "gene_synonym", + "EcoGene:EG10950" + ], + [ + "gene_synonym", + "GI:90111747" + ], + [ + "gene_synonym", + "GeneID:948908" + ], + [ + "gene_synonym", + "JW4355" + ], + [ + "gene_synonym", + "NP_418809.4" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0AGC3" + ], + [ + "gene_synonym", + "b4392" + ], + [ + "gene_synonym", + "slt" + ], + [ + "gene_synonym", + "sltY" + ] + ], + "dna_sequence": "GTGGAAAAAGCCAAACAAGTTACCTGGCGGCTGTTGGCTGCCGGTGTCTGTCTGCTGACGGTCAGCAGCGTGGCGCGAGCCGACTCACTGGATGAGCAGCGTAGTCGTTACGCGCAAATCAAGCAGGCCTGGGATAATCGACAAATGGATGTGGTCGAACAAATGATGCCTGGACTGAAGGATTATCCGCTTTATCCCTACCTGGAATACCGCCAGATCACCGATGATCTGATGAATCAACCGGCGGTGACGGTCACTAACTTTGTTCGCGCTAACCCCACGCTTCCTCCCGCTCGCACGCTGCAATCTCGTTTCGTCAATGAACTGGCGCGGCGTGAAGACTGGCGTGGCTTGTTAGCCTTTAGCCCGGAAAAGCCCGGAACTACCGAAGCGCAATGTAATTACTACTATGCGAAATGGAACACCGGGCAGAGTGAAGAAGCCTGGCAAGGGGCGAAAGAGCTGTGGCTAACCGGCAAGAGCCAGCCTAACGCCTGTGACAAGTTATTTAGCGTCTGGCGTGCGTCAGGTAAACAAGATCCGCTGGCGTATTTAGAGCGTATCCGTCTGGCGATGAAAGCGGGTAACACAGGCCTGGTAACAGTGCTGGCAGGGCAGATGCCTGCCGATTACCAGACTATCGCCTCGGCAATCATTTCACTGGCGAACAACCCTAATACGGTACTGACCTTCGCGCGTACAACTGGCGCGACCGATTTTACCCGTCAAATGGCGGCGGTGGCGTTTGCCAGTGTGGCGCGGCAGGATGCTGAGAATGCACGGCTGATGATCCCATCGCTTGCCCAGGCGCAGCAGCTTAATGAAGATCAGATTCAGGAGCTGCGCGATATCGTCGCCTGGCGTTTGATGGGCAACGATGTCACCGACGAGCAGGCGAAATGGCGCGATGACGCCATTATGCGCTCGCAATCTACTTCGCTTATTGAACGCCGTGTACGAATGGCGCTTGGCACCGGCGATCGTCGCGGCCTGAATACCTGGCTGGCGCGTCTGCCTATGGAAGCGAAAGAGAAAGATGAATGGCGTTACTGGCAGGCGGATTTATTGCTGGAACGCGGACGTGAAGCTGAAGCAAAAGAGATTTTGCATCAACTCATGCAACAGCGTGGTTTCTACCCGATGGTTGCAGCACAACGCATCGGCGAAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGTACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAACTGGCGCGGTATGCTTTCAACAACCAATGGTGGGATCTTAGCGTTCAGGCAACGATCGCCGGGAAGCTGTGGGATCATCTGGAAGAGCGATTCCCGCTGGCTTACAACGATCTTTTCAAACGCTACACCAGCGGTAAGGAGATCCCGCAAAGCTATGCGATGGCGATTGCTCGTCAGGAGAGCGCCTGGAATCCGAAAGTGAAATCACCGGTAGGGGCCAGCGGCTTGATGCAGATTATGCCTGGTACAGCGACCCATACGGTGAAGATGTTCTCTATTCCCGGTTATAGCAGTCCTGGGCAATTGCTGGATCCGGAAACGAATATCAACATTGGCACCAGTTACCTGCAATATGTTTATCAGCAGTTTGGCAATAATCGTATTTTCTCCTCAGCAGCTTATAACGCCGGACCAGGGCGGGTGCGAACCTGGCTTGGCAACAGCGCCGGGCGTATCGACGCAGTGGCATTTGTCGAGAGTATTCCATTCTCCGAGACGCGCGGTTATGTGAAGAACGTGCTGGCTTATGACGCTTACTACCGCTATTTCATGGGGGATAAACCGACGTTGATGAGCGCCACGGAATGGGGACGTCGTTACTGA", 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"protein_translation_length": 645, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014408" + ], + [ + "gene_synonym", + "ECK4385" + ], + [ + "gene_synonym", + "EcoGene:EG11029" + ], + [ + "gene_synonym", + "GI:16132210" + ], + [ + "gene_synonym", + "GeneID:948917" + ], + [ + "gene_synonym", + "JW4356" + ], + [ + "gene_synonym", + "NP_418810.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0A881" + ], + [ + "gene_synonym", + "b4393" + ], + [ + "gene_synonym", + "trpR" + ] + ], + "dna_sequence": "ATGGCCCAACAATCACCCTATTCAGCAGCGATGGCAGAACAGCGTCACCAGGAGTGGTTACGTTTTGTCGACCTGCTTAAGAATGCCTACCAAAACGATCTCCATTTACCGTTGTTAAACCTGATGCTGACGCCAGATGAGCGCGAAGCGTTGGGGACTCGCGTGCGTATTGTCGAAGAGCTGTTGCGCGGCGAAATGAGCCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGA", + "dna_sequence_length": 327, + "functions": [ + "transcriptional repressor, tryptophan-binding" + ], + "id": "CDS_4309", + "location": [ 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"ATGCAGACCCCGCACATTCTTATCGTTGAAGACGAGTTGGTAACACGCAACACGTTGAAAAGTATTTTCGAAGCGGAAGGCTATGATGTTTTCGAAGCGACAGATGGCGCGGAAATGCATCAGATCCTCTCTGAATATGACATCAACCTGGTGATCATGGATATCAATCTGCCGGGTAAGAACGGTCTTCTGTTAGCGCGTGAACTGCGCGAGCAGGCGAATGTTGCGTTGATGTTCCTGACTGGCCGTGACAACGAAGTCGATAAAATTCTCGGCCTCGAAATCGGTGCAGATGACTACATCACCAAACCGTTCAACCCGCGTGAACTGACGATTCGTGCACGCAACCTACTGTCCCGTACCATGAATCTGGGTACTGTCAGCGAAGAACGTCGTAGCGTTGAAAGCTACAAGTTCAATGGTTGGGAACTGGACATCAACAGCCGTTCGTTGATCGGCCCTGATGGCGAGCAGTACAAGCTGCCGCGCAGCGAGTTCCGCGCCATGCTTCACTTCTGTGAAAACCCAGGCAAAATTCAGTCCCGTGCTGAACTGCTGAAGAAAATGACCGGCCGTGAGCTGAAACCGCACGACCGTACTGTAGACGTGACGATCCGCCGTATTCGTAAACATTTCGAATCTACGCCGGATACGCCGGAAATCATCGCCACCATTCACGGTGAAGGTTATCGCTTCTGCGGTGATCTGGAAGATTAA", + "dna_sequence_length": 717, + "functions": [ + "response regulator in two-component regulatory system with ArcB or CpxA" + ], + "id": "CDS_4317", + "location": [ + [ + "NC_000913", + 4640306, + "-", + 717 + ] + ], + "md5": "e452b8943ecd4b5e38543fbe36db1b29", + "parent_gene": "", + "protein_md5": "1917eff55d421295934a3e3ab9e8c178", + "protein_translation": "MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED", + "protein_translation_length": 238, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014437" + ], + [ + "gene_synonym", + "ECK4394" + ], + [ + "gene_synonym", + "EcoGene:EG12601" + ], + [ + "gene_synonym", + "GI:16132219" + ], + [ + "gene_synonym", + "GeneID:948925" + ], + [ + "gene_synonym", + "JW4365" + ], + [ + "gene_synonym", + "NP_418819.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P0ADD9" + ], + [ + "gene_synonym", + "b4402" + ], + [ + "gene_synonym", + "yjjY" + ] + ], + "dna_sequence": "ATGACTAAAGTACGTAATTGCGTTCTTGATGCACTTTCCATCAACGTCAACAACATCATTAGCTTGGTCGTGGGTACTTTCCCTCAGGACCCGACAGTGTCAAAAACGGCTGTCATCCTAACCATTTTAACAGCAACATAA", + "dna_sequence_length": 141, + "functions": [ + "uncharacterized protein" + ], + "id": "CDS_4318", + "location": [ + [ + "NC_000913", + 4640402, + "+", + 141 + ] + ], + "md5": "774c8ad4517921114a55c82b4917d9a6", + "parent_gene": "", + "protein_md5": "833365d3c81d8fff0f42f49ee69d9fa9", + "protein_translation": "MTKVRNCVLDALSINVNNIISLVVGTFPQDPTVSKTAVILTILTAT", + "protein_translation_length": 46, + "type": "CDS" + }, + { + "aliases": [ + [ + "gene_synonym", + "ASAP:ABE-0014442" + ], + [ + "gene_synonym", + "ECK4395" + ], + [ + "gene_synonym", + "EcoGene:EG12309" + ], + [ + "gene_synonym", + "GI:16132220" + ], + [ + "gene_synonym", + "GeneID:948924" + ], + [ + "gene_synonym", + "JW4366" + ], + [ + "gene_synonym", + "NP_418820.1" + ], + [ + "gene_synonym", + "UniProtKB/Swiss-Prot:P37005" + ], + [ + "gene_synonym", + "b4403" + ], + [ + "gene_synonym", + "lasT" + ], + [ + "gene_synonym", + "yjtD" + ] + ], + "dna_sequence": "ATGCGTATAACGATTATTCTGGTCGCACCCGCCAGAGCAGAAAATATTGGGGCAGCGGCGCGGGCAATGAAAACGATGGGGTTTAGCGATCTGCGGATTGTCGATAGTCAGGCACACCTGGAGCCAGCCACCCGCTGGGTCGCACATGGATCTGGTGATATTATTGATAATATTAAAGTTTTCCCGACATTGGCTGAATCGTTACACGATGTCGATTTCACTGTCGCCACCACTGCGCGCAGTCGGGCGAAATATCATTACTACGCCACGCCAGTTGAACTGGTGCCGCTGTTAGAGGAAAAATCTTCATGGATGAGCCATGCCGCGCTGGTGTTTGGTCGCGAAGATTCCGGGTTGACTAACGAAGAGTTAGCGTTGGCTGACGTTCTTACTGGTGTGCCGATGGTGGCGGATTATCCTTCGCTCAATCTGGGGCAGGCGGTGATGGTCTATTGCTATCAATTAGCAACATTAATACAACAACCGGCGAAAAGTGATGCAACGGCAGACCAACATCAACTGCAAGCTTTACGCGAACGAGCCATGACATTGCTGACGACTCTGGCAGTGGCAGATGACATAAAACTGGTCGACTGGTTACAACAACGCCTGGGGCTTTTAGAGCAACGAGACACGGCAATGTTGCACCGTTTGCTGCATGATATTGAAAAAAATATCACCAAATAA", + "dna_sequence_length": 687, + "functions": [ + "putative methyltransferase" + ], + "id": "CDS_4319", + "location": [ + [ + "NC_000913", + 4640942, + "+", + 687 + ] + ], + "md5": "bb3b817ca5149195111092e3115eca06", + "parent_gene": "", + "protein_md5": "c75e37d0bd96316e92f64e8a61352941", + "protein_translation": "MRITIILVAPARAENIGAAARAMKTMGFSDLRIVDSQAHLEPATRWVAHGSGDIIDNIKVFPTLAESLHDVDFTVATTARSRAKYHYYATPVELVPLLEEKSSWMSHAALVFGREDSGLTNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQQPAKSDATADQHQLQALRERAMTLLTTLAVADDIKLVDWLQQRLGLLEQRDTAMLHRLLHDIEKNITK", + "protein_translation_length": 228, + "type": "CDS" + } + ], + "dna_size": 4641652, + "domain": "Bacteria", + "external_source_origination_date": "16-DEC-2014", + "feature_counts": { + "CDS": 4319, + "mRNA": 0, + "non_coding_features": 0, + "protein_encoding_gene": 0 + }, + "features": [], + "gc_content": 0.50791, + "genetic_code": 11, + "genome_tiers": [ + "ExternalDB" + ], + "genome_type": "Unknown", + "id": "Escherichia_coli_str_K_12_substr_MG1655_RefSeq", + "md5": "afd67f98d72869f1e5b943aa9efd72af", + "molecule_type": "Unknown", + "mrnas": [], + "non_coding_features": [], + "num_contigs": 1, + "original_source_file_name": "GCF_000005845.2_ASM584v2_genomic.gbff", + "publications": [ + [ + 16397293, + "PubMed", + "Escherichia coli K-12: a cooperatively developed annotation snapshot--2005", + "http://www.ncbi.nlm.nih.gov/pubmed/16397293", + "2006", + "Riley,M., Abe,T., Arnaud,M.B., Berlyn,M.K., Blattner,F.R., Chaudhuri,R.R., Glasner,J.D., Horiuchi,T., Keseler,I.M., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Rudd,K.E., Serres,M.H., Thomas,G.H., Thomson,N.R., Wishart,D. and Wanner,B.L.", + "Nucleic Acids Res. 34 (1), 1-9 (2006)" + ], + [ + 0, + "", + "Direct Submission", + "", + "15-NOV-2013", + "Blattner,F.R. and Plunkett,G. III.", + "Submitted (15-NOV-2013) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "02-SEP-1997", + "Blattner,F.R. and Plunkett,G. III.", + "Submitted (02-SEP-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "A more accurate sequence comparison between genomes of Escherichia coli K12 W3110 and MG1655 strains", + "", + "", + "Hayashi,K., Morooka,N., Mori,H. and Horiuchi,T.", + "Unpublished" + ], + [ + 0, + "", + "Direct Submission", + "", + "30-JUL-2014", + "Blattner,F.R. and Plunkett,G. III.", + "Submitted (30-JUL-2014) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "10-JUN-2004", + "Plunkett,G. III.", + "Submitted (10-JUN-2004) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "06-FEB-2013", + "Rudd,K.E.", + "Submitted (06-FEB-2013) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "07-FEB-2006", + "Plunkett,G. III.", + "Submitted (07-FEB-2006) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "Workshop on Annotation of Escherichia coli K-12", + "", + "", + "Arnaud,M., Berlyn,M.K.B., Blattner,F.R., Galperin,M.Y., Glasner,J.D., Horiuchi,T., Kosuge,T., Mori,H., Perna,N.T., Plunkett,G. III, Riley,M., Rudd,K.E., Serres,M.H., Thomas,G.H. and Wanner,B.L.", + "Unpublished" + ], + [ + 0, + "", + "Direct Submission", + "", + "26-SEP-2013", + "Blattner,F.R. and Plunkett,G. III.", + "Submitted (26-SEP-2013) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 9278503, + "PubMed", + "The complete genome sequence of Escherichia coli K-12", + "http://www.ncbi.nlm.nih.gov/pubmed/9278503", + "1997", + "Blattner,F.R., Plunkett,G. III, Bloch,C.A., Perna,N.T., Burland,V., Riley,M., Collado-Vides,J., Glasner,J.D., Rode,C.K., Mayhew,G.F., Gregor,J., Davis,N.W., Kirkpatrick,H.A., Goeden,M.A., Rose,D.J., Mau,B. and Shao,Y.", + "Science 277 (5331), 1453-1462 (1997)" + ], + [ + 0, + "NCBI Genome Project", + "Direct Submission", + "", + "26-AUG-2014", + "", + "Submitted (26-AUG-2014) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "16-JAN-1997", + "Blattner,F.R. and Plunkett,G. III.", + "Submitted (16-JAN-1997) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 16738553, + "PubMed", + "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110", + "http://www.ncbi.nlm.nih.gov/pubmed/16738553", + "2006", + "Hayashi,K., Morooka,N., Yamamoto,Y., Fujita,K., Isono,K., Choi,S., Ohtsubo,E., Baba,T., Wanner,B.L., Mori,H. and Horiuchi,T.", + "Mol. Syst. Biol. 2, 2006 (2006)" + ], + [ + 0, + "", + "ASAP: Escherichia coli K-12 strain MG1655 version m56", + "", + "", + "Glasner,J.D., Perna,N.T., Plunkett,G. III, Anderson,B.D., Bockhorst,J., Hu,J.C., Riley,M., Rudd,K.E. and Serres,M.H.", + "Unpublished" + ], + [ + 0, + "", + "Escherichia coli K-12 MG1655 yqiK-rfaE intergenic region, genomic sequence correction", + "", + "", + "Perna,N.T.", + "Unpublished" + ], + [ + 0, + "", + "Direct Submission", + "", + "13-OCT-1998", + "Plunkett,G. III.", + "Submitted (13-OCT-1998) Laboratory of Genetics, University of Wisconsin, 425G Henry Mall, Madison, WI 53706-1580, USA" + ], + [ + 0, + "", + "Direct Submission", + "", + "24-APR-2007", + "Rudd,K.E.", + "Submitted (24-APR-2007) Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine, 118 Gautier Bldg., Miami, FL 33136, USA" + ], + [ + 0, + "", + "A manual approach to accurate translation start site annotation: an E. coli K-12 case study", + "", + "", + "Rudd,K.E.", + "Unpublished" + ] + ], + "reference_annotation": 0, + "scientific_name": "Escherichia coli str. K-12 substr. MG1655", + "source": "RefSeq", + "source_id": "NC_000913", + "taxonomy": "cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli K-12", + "type": "reference_test", + "warnings": [ + "For prokaryotes, CDS array should generally be the same length as the Features array.", + "Genome molecule_type Unknown is not expected for domain Bacteria.", + "Unable to determine organism taxonomy" + ] +} \ No newline at end of file From cf72c0756f60a1c3c45249e88cc00c414ec1463e Mon Sep 17 00:00:00 2001 From: Sijie Date: Tue, 10 Jun 2025 14:41:19 -0700 Subject: [PATCH 40/70] test md5sum & genome data in test_genomes --- test/problematic_tests/save_genome_test.py | 61 +++++-------------- .../genbank_upload_full_test.py | 24 +++----- test/test_utils.py | 12 +++- 3 files changed, 32 insertions(+), 65 deletions(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 76e88668..ad283bea 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -25,7 +25,7 @@ from GenomeFileUtil.authclient import KBaseAuth as _KBaseAuth from GenomeFileUtil.core.GenomeInterface import GenomeInterface from installed_clients.WorkspaceClient import Workspace as workspaceService -from test_utils import check_result_object_info_provenance_data, PROVENANCE +from test_utils import check_result_object_info_provenance_data, PROVENANCE, calculate_md5sum, load_expected_data _KBASE_GENOME = "KBaseGenomes.Genome" _GENOME_FILE_WARNINGS = [ @@ -166,33 +166,7 @@ def fail_save_genome(self, params, error, exception=ValueError, contains=False, else: self.assertEqual(error, str(context.exception)) - def _get_object(self, result): - info = result["info"] - ref = f'{info[6]}/{info[0]}/{info[4]}' - return self.wsClient.get_objects2({"objects": [{'ref': ref}]})["data"][0] - - def check_genomes_info_prov_data(self, results, genome_names): - for idx, res in enumerate(results): - obj = self._get_object(res) - self.check_genome_info(res, genome_names[idx]) - self.check_genome_prov(obj) - self.check_genome_data(obj) - - def check_genome_data(self, obj): - data = obj["data"] - print("*" * 40) - print("data is: ") - print(data) - print("*" * 40) - - def check_genome_prov(self, obj): - prov = obj["provenance"] - print("*" * 40) - print("prov is: ") - print(prov) - print("*" * 40) - - def check_genome_info( + def check_save_one_genome_output( self, ret, genome_name, @@ -241,7 +215,7 @@ def yest_one_genome(self): 'name': genome_name, 'data': self.test_genome_data} ret = self.getImpl().save_one_genome(self.ctx, params)[0] - self.check_genome_info(ret, genome_name) + self.check_save_one_genome_output(ret, genome_name) def yest_one_genome_with_hidden(self): self.start_test() @@ -251,7 +225,7 @@ def yest_one_genome_with_hidden(self): 'data': self.test_genome_data, 'hidden': 1} ret = self.getImpl().save_one_genome(self.ctx, params)[0] - self.check_genome_info(ret, genome_name) + self.check_save_one_genome_output(ret, genome_name) self.check_hidden(genome_name) genome_name = 'test_genome_hidden_2' @@ -260,7 +234,7 @@ def yest_one_genome_with_hidden(self): 'data': self.test_genome_data, 'hidden': True} ret = self.getImpl().save_one_genome(self.ctx, params)[0] - self.check_genome_info(ret, genome_name) + self.check_save_one_genome_output(ret, genome_name) self.check_hidden(genome_name) def _setup_handle(self, file_name): @@ -269,6 +243,9 @@ def _setup_handle(self, file_name): with open(file_path, "w") as f: json.dump(self.test_genome_data, f, indent=4) + # Calculate expected md5sum + md5sum = calculate_md5sum(file_path) + # Upload to blobstore shock_ret = self.dfu.file_to_shock( {"file_path": file_path, "make_handle": 1, "pack": "gzip"} @@ -277,7 +254,7 @@ def _setup_handle(self, file_name): # Return updated genome genome_with_handle_ref = deepcopy(self.test_genome_data) genome_with_handle_ref["genbank_handle_ref"] = shock_ret['handle']['hid'] - return genome_with_handle_ref + return genome_with_handle_ref, md5sum def test_genomes(self): self.start_test() @@ -285,10 +262,11 @@ def test_genomes(self): genome_name1 = 'e_coli_with_assembly_1.json' genome_name2 = 'e_coli_with_assembly_2.json' - genome_with_handle_ref_1 = self._setup_handle(genome_name1) - genome_with_handle_ref_2 = self._setup_handle(genome_name2) + genome_with_handle_ref_1, genome1_md5sum = self._setup_handle(genome_name1) + genome_with_handle_ref_2, genome2_md5sum= self._setup_handle(genome_name2) file_names = [genome_name1, genome_name2] + expected_genome_md5sum = [genome1_md5sum, genome2_md5sum] genome_metas = [ { @@ -328,15 +306,8 @@ def test_genomes(self): ] expected_genome_data = [ - {}, - {}, - {}, - ] - - expected_genome_md5sum = [ - "", - "", - "", + load_expected_data("data/e_coli/e_coli_with_assembly_curated.json"), + load_expected_data("data/e_coli/e_coli_with_assembly_curated.json"), ] inputs = [ @@ -382,7 +353,7 @@ def yest_genomes_with_hidden(self): ] params = {'workspace_id': self.wsID, 'inputs': inputs} ret = self.genome_interface.save_genome_mass(params)[0] - self.check_genome_info(ret, genome_name, warnings=[]) + self.check_save_one_genome_output(ret, genome_name, warnings=[]) inputs = [ { @@ -393,7 +364,7 @@ def yest_genomes_with_hidden(self): ] params = {'workspace_id': self.wsID, 'inputs': inputs} ret = self.genome_interface.save_genome_mass(params)[0] - self.check_genome_info(ret, genome_name, warnings=[]) + self.check_save_one_genome_output(ret, genome_name, warnings=[]) def yest_bad_genomes_params_missing_parameter(self): self.start_test() diff --git a/test/supplemental_genbank_tests/genbank_upload_full_test.py b/test/supplemental_genbank_tests/genbank_upload_full_test.py index 220754a9..02a4445b 100644 --- a/test/supplemental_genbank_tests/genbank_upload_full_test.py +++ b/test/supplemental_genbank_tests/genbank_upload_full_test.py @@ -1,4 +1,3 @@ -import json import os import pytest import shutil @@ -12,7 +11,7 @@ from installed_clients.DataFileUtilClient import DataFileUtil from installed_clients.WorkspaceClient import Workspace as workspaceService from conftest import assert_exception_correct -from test_utils import check_result_object_info_provenance_data, PROVENANCE +from test_utils import check_result_object_info_provenance_data, PROVENANCE, load_expected_data class GenomeFileUtilTest(unittest.TestCase): @@ -173,15 +172,6 @@ def _run_test_fail_mass(self, params, error_message): self.serviceImpl.genbanks_to_genomes(self.ctx, params) assert_exception_correct(got.value, ValueError(error_message)) - def _load_expected_data(self, json_path): - with open(json_path, "r") as read_file: - data = json.load(read_file) - return data - - def _dump_retrieved_data(self, json_path, dictionary): - with open(json_path, "w") as outfile: - json.dump(dictionary, outfile) - def test_genbank_to_genome_invalid_workspace(self): genome_name = "GCF_000970165.1_ASM97016v1_genomic.gbff.gz" params = { @@ -271,15 +261,15 @@ def test_genbanks_to_genomes(self): ] expected_genome_data = [ - self._load_expected_data("data/genome_curated/genome_Cyanidioschyzon_merolae_one_locus.json"), - self._load_expected_data("data/genome_curated/genome_mRNA_with_no_parent.json"), - self._load_expected_data("data/genome_curated/genome_ontology.json"), + load_expected_data("data/genome_curated/genome_Cyanidioschyzon_merolae_one_locus.json"), + load_expected_data("data/genome_curated/genome_mRNA_with_no_parent.json"), + load_expected_data("data/genome_curated/genome_ontology.json"), ] expected_assembly_data = [ - self._load_expected_data("data/genome_curated/assembly_Cyanidioschyzon_merolae_one_locus.json"), - self._load_expected_data("data/genome_curated/assembly_mRNA_with_no_parent.json"), - self._load_expected_data("data/genome_curated/assembly_ontology.json"), + load_expected_data("data/genome_curated/assembly_Cyanidioschyzon_merolae_one_locus.json"), + load_expected_data("data/genome_curated/assembly_mRNA_with_no_parent.json"), + load_expected_data("data/genome_curated/assembly_ontology.json"), ] expected_genome_md5sum = [ diff --git a/test/test_utils.py b/test/test_utils.py index 29d92de1..0df42464 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -1,5 +1,6 @@ from copy import deepcopy import hashlib +import json import os import re from datetime import datetime @@ -215,7 +216,7 @@ def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref): file_path = file_ret['file_path'] retrieved_node_filename = file_ret['node_file_name'] - retrieved_genome_md5sum = _calculate_md5sum(file_path) + retrieved_genome_md5sum = calculate_md5sum(file_path) for ontology_event in data.get("ontology_events", []): ontology_event.pop("timestamp") @@ -246,7 +247,7 @@ def _retrieve_assembly_data(hs_client, dfu_client, scratch_dir, data): file_ret = _download_file_from_blobstore(dfu_client, scratch_dir, handle_id) file_path = file_ret['file_path'] retrieved_node_filename = file_ret['node_file_name'] - retrieved_assembly_md5sum = _calculate_md5sum(file_path) + retrieved_assembly_md5sum = calculate_md5sum(file_path) assert retrieved_assembly_md5sum == handle["remote_md5"] url = handle.get('url') @@ -267,13 +268,18 @@ def _download_file_from_blobstore(dfu_client, scratch_dir, handle_id): ) return file_ret -def _calculate_md5sum(file_path): +def calculate_md5sum(file_path): md5 = hashlib.md5() with open(file_path, "rb") as f: for chunk in iter(lambda: f.read(4096), b""): md5.update(chunk) return md5.hexdigest() +def load_expected_data(json_path): + with open(json_path, "r") as read_file: + data = json.load(read_file) + return data + def _get_blob_id(hs_client, handle_id): handles = hs_client.hids_to_handles([handle_id]) blob_id = handles[0]['id'] From f2b8f999769e21adce6e9d41495cca919c07b138 Mon Sep 17 00:00:00 2001 From: Sijie Date: Tue, 10 Jun 2025 16:24:04 -0700 Subject: [PATCH 41/70] clean up test_utils.py & test test_genomes_with_hidden --- test/problematic_tests/save_genome_test.py | 19 ++++++++++-------- test/test_utils.py | 23 ---------------------- 2 files changed, 11 insertions(+), 31 deletions(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index ad283bea..aaddbbda 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -200,7 +200,7 @@ def check_hidden(self, target_genome_name): genome_names = [object_info[1] for object_info in object_list] self.assertIn(target_genome_name, genome_names) - def yest_bad_one_genome_params(self): + def test_bad_one_genome_params(self): self.start_test() invalidate_params = {'missing_workspace': 'workspace', 'name': 'name', @@ -208,7 +208,7 @@ def yest_bad_one_genome_params(self): error_msg = "Exactly one of a 'workspace_id' or a 'workspace' parameter must be provided" self.fail_save_genome(invalidate_params, error_msg) - def yest_one_genome(self): + def test_one_genome(self): self.start_test() genome_name = 'test_genome' params = {'workspace': self.wsName, @@ -217,7 +217,7 @@ def yest_one_genome(self): ret = self.getImpl().save_one_genome(self.ctx, params)[0] self.check_save_one_genome_output(ret, genome_name) - def yest_one_genome_with_hidden(self): + def test_one_genome_with_hidden(self): self.start_test() genome_name = 'test_genome_hidden_1' params = {'workspace': self.wsName, @@ -341,9 +341,9 @@ def test_genomes(self): expected_genome_md5sum ) - def yest_genomes_with_hidden(self): + def test_genomes_with_hidden(self): self.start_test() - genome_name = 'test_genome_hidden' + genome_name = 'test_genomes_hidden_1' inputs = [ { 'name': genome_name, @@ -354,7 +354,9 @@ def yest_genomes_with_hidden(self): params = {'workspace_id': self.wsID, 'inputs': inputs} ret = self.genome_interface.save_genome_mass(params)[0] self.check_save_one_genome_output(ret, genome_name, warnings=[]) + self.check_hidden(genome_name) + genome_name = 'test_genomes_hidden_2' inputs = [ { 'name': genome_name, @@ -365,8 +367,9 @@ def yest_genomes_with_hidden(self): params = {'workspace_id': self.wsID, 'inputs': inputs} ret = self.genome_interface.save_genome_mass(params)[0] self.check_save_one_genome_output(ret, genome_name, warnings=[]) + self.check_hidden(genome_name) - def yest_bad_genomes_params_missing_parameter(self): + def test_bad_genomes_params_missing_parameter(self): self.start_test() invalidate_params = { 'workspace_id': self.wsID, @@ -375,7 +378,7 @@ def yest_bad_genomes_params_missing_parameter(self): error_msg = "Entry #1 in inputs field has invalid params: name parameter is required, but missing" self.fail_save_genome(invalidate_params, error_msg, mass=True) - def yest_GenomeInterface_check_dna_sequence_in_features(self): + def test_GenomeInterface_check_dna_sequence_in_features(self): # no feature in genome genome = {'missing_features': 'features'} copied_genome = genome.copy() @@ -402,7 +405,7 @@ def yest_GenomeInterface_check_dna_sequence_in_features(self): self.assertTrue(feature_dna_sum > 3000000) self.assertEqual(copied_genome, self.test_genome_data) - def yest_GenomeInterface_own_handle(self): + def test_GenomeInterface_own_handle(self): # no handle in genome genome = {'missing_genbank_handle_ref': 'hid'} origin_genome = genome.copy() diff --git a/test/test_utils.py b/test/test_utils.py index 0df42464..f01f7f24 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -169,21 +169,6 @@ def _check_data( if is_genome else file_name + "_assembly.fasta" ) - print("*" * 40) - print(f"file_name is {file_name}") - print("*" * 40) - - print("*" * 40) - print(f"retrieved_data is {retrieved_data}") - print("*" * 40) - - print("*" * 40) - print(f"retrieved_md5sum is {retrieved_md5sum}") - print("*" * 40) - - print("*" * 40) - print(f"retrieved_node_filename is {retrieved_node_filename}") - print("*" * 40) assert retrieved_data == expected_data assert retrieved_md5sum == expected_md5sum @@ -193,10 +178,6 @@ def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref): # make a deep copy to avoid modifying the original genome data data = deepcopy(data) - print("*" * 40) - print(f"data before processing is: {data}") - print("*" * 40) - for key in ["cdss", "features", "mrnas", "non_coding_features"]: for dist in data.get(key): if dist.get("aliases"): @@ -206,10 +187,6 @@ def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref): assert _UPA_PATTERN.match(retrieved_assembly_ref) assert retrieved_assembly_ref == expected_assembly_ref - # print("*" * 40) - # print(f"data before pop is: {data}") - # print("*" * 40) - # check handle ref handle_id = data.pop("genbank_handle_ref") file_ret = _download_file_from_blobstore(dfu_client, scratch_dir, handle_id) From cc5cee17c522d3b838effd2aa4c73bc6b0e85db1 Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 11 Jun 2025 14:30:39 -0700 Subject: [PATCH 42/70] register node to delete --- test/problematic_tests/save_genome_test.py | 3 +++ 1 file changed, 3 insertions(+) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index aaddbbda..8121216e 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -251,6 +251,9 @@ def _setup_handle(self, file_name): {"file_path": file_path, "make_handle": 1, "pack": "gzip"} ) + # Register this node for cleanup in the deletion + self.nodes_to_delete.append(shock_ret['shock_id']) + # Return updated genome genome_with_handle_ref = deepcopy(self.test_genome_data) genome_with_handle_ref["genbank_handle_ref"] = shock_ret['handle']['hid'] From d5ae8a32dc3c30d22bbd6e56969473833741d98f Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 11 Jun 2025 15:23:45 -0700 Subject: [PATCH 43/70] add test for g2g_mass with large genome input and refactor test file --- test/utility/genome_size_tests.py | 101 +++++++++++++----------------- 1 file changed, 44 insertions(+), 57 deletions(-) diff --git a/test/utility/genome_size_tests.py b/test/utility/genome_size_tests.py index 1340cb45..a869153e 100644 --- a/test/utility/genome_size_tests.py +++ b/test/utility/genome_size_tests.py @@ -1,8 +1,7 @@ +import mock import os -import shutil import time import unittest -import mock from configparser import ConfigParser from installed_clients.DataFileUtilClient import DataFileUtil @@ -33,8 +32,13 @@ def setUpClass(cls): cls.cfg[nameval[0]] = nameval[1] cls.wsURL = cls.cfg['workspace-url'] cls.wsClient = workspaceService(cls.wsURL, token=token) + cls.dfuClient = DataFileUtil(os.environ['SDK_CALLBACK_URL'], token=token, service_ver='dev') cls.serviceImpl = GenomeFileUtil(cls.cfg) - cls.token = token + + suffix = int(time.time() * 1000) + cls.wsName = "test_GenomeFileUtil_" + str(suffix) + cls.wsClient.create_workspace({'workspace': cls.wsName}) + cls.wsID = cls.dfuClient.ws_name_to_id(cls.wsName) @classmethod def tearDownClass(cls): @@ -42,42 +46,34 @@ def tearDownClass(cls): cls.wsClient.delete_workspace({'workspace': cls.wsName}) print('Test workspace was deleted') - def getWsClient(self): - return self.__class__.wsClient + def _prep_input(self, gbk_path, ws_obj_name, g2g_mass=False): - def getWsName(self): - if hasattr(self.__class__, 'wsName'): - return self.__class__.wsName - suffix = int(time.time() * 1000) - wsName = "test_GenomeFileUtil_" + str(suffix) - self.getWsClient().create_workspace({'workspace': wsName}) - self.__class__.wsName = wsName - return wsName + base_input = { + 'file': {'path': gbk_path}, + 'workspace_name': self.wsName, + 'genome_name': ws_obj_name, + 'generate_ids_if_needed': 1 + } + + if g2g_mass: - def getImpl(self): - return self.__class__.serviceImpl + base_input.pop('workspace_name') + return { + 'workspace_id': self.wsID, + 'inputs': [base_input] + } - def getContext(self): - return self.__class__.ctx + return base_input def test_full_sequence(self): # features should not have sequences in it. But both non_coding_features and CDSs should have sequences. print("test_full_sequence") gbk_path = "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff" ws_obj_name = 'full_sequence' - result = self.getImpl().genbank_to_genome( - self.getContext(), - { - 'file': { - 'path': gbk_path}, - 'workspace_name': self.getWsName(), - 'genome_name': ws_obj_name, - 'generate_ids_if_needed': 1 - })[0] - data_file_cli = DataFileUtil(os.environ['SDK_CALLBACK_URL'], - token=self.__class__.token, - service_ver='dev') - genome = data_file_cli.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] + input_data = self._prep_input(gbk_path, ws_obj_name) + result = self.serviceImpl.genbank_to_genome(self.ctx, input_data)[0] + + genome = self.dfuClient.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] count_features_without_dna_sequence = 0 for feature in genome['features']: if "dna_sequence" not in feature: @@ -103,19 +99,10 @@ def test_partial_sequence(self): print("test_partial_sequence") gbk_path = "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff" ws_obj_name = 'partial_sequence' - result = self.getImpl().genbank_to_genome( - self.getContext(), - { - 'file': { - 'path': gbk_path}, - 'workspace_name': self.getWsName(), - 'genome_name': ws_obj_name, - 'generate_ids_if_needed': 1 - })[0] - data_file_cli = DataFileUtil(os.environ['SDK_CALLBACK_URL'], - token=self.__class__.token, - service_ver='dev') - genome = data_file_cli.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] + input_data = self._prep_input(gbk_path, ws_obj_name) + result = self.serviceImpl.genbank_to_genome(self.ctx, input_data)[0] + + genome = self.dfuClient.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] count_features_with_dna_sequence = 0 for feature in genome['features']: if "dna_sequence" in feature: @@ -141,19 +128,10 @@ def test_no_sequence_kept(self): print("test_no_sequence_kept") gbk_path = "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff" ws_obj_name = 'no_sequence' - result = self.getImpl().genbank_to_genome( - self.getContext(), - { - 'file': { - 'path': gbk_path}, - 'workspace_name': self.getWsName(), - 'genome_name': ws_obj_name, - 'generate_ids_if_needed': 1 - })[0] - data_file_cli = DataFileUtil(os.environ['SDK_CALLBACK_URL'], - token=self.__class__.token, - service_ver='dev') - genome = data_file_cli.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] + input_data = self._prep_input(gbk_path, ws_obj_name) + result = self.serviceImpl.genbank_to_genome(self.ctx, input_data)[0] + + genome = self.dfuClient.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] count_features_with_dna_sequence = 0 for feature in genome['features']: if "dna_sequence" in feature: @@ -174,4 +152,13 @@ def test_no_sequence_kept(self): @mock.patch("GenomeFileUtil.core.GenomeInterface.MAX_GENOME_SIZE", 1) def test_max_genome_size(self): with self.assertRaisesRegex(ValueError, "This genome size of "): - GenomeInterface.validate_genome({"taxon_ref": "", "domain": ""}) \ No newline at end of file + GenomeInterface.validate_genome({"taxon_ref": "", "domain": ""}) + + @mock.patch("GenomeFileUtil.core.GenomeInterface.MAX_GENOME_SIZE", 1) + def test_max_genome_size_with_genbanks_to_genomes(self): + print("test_max_genome_size_with_genbanks_to_genomes") + gbk_path = "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff" + ws_obj_name = 'large_genome_with_g2g_mass' + input_data = self._prep_input(gbk_path, ws_obj_name, g2g_mass=True) + with self.assertRaisesRegex(ValueError, "This genome size of "): + self.serviceImpl.genbank_to_genome(self.ctx, input_data) From 7022f357ec3a0546c9c99685e4a22314f267f9b1 Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 11 Jun 2025 16:10:30 -0700 Subject: [PATCH 44/70] use g2g_mass for testing --- test/utility/genome_size_tests.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/test/utility/genome_size_tests.py b/test/utility/genome_size_tests.py index a869153e..aad28f2f 100644 --- a/test/utility/genome_size_tests.py +++ b/test/utility/genome_size_tests.py @@ -161,4 +161,4 @@ def test_max_genome_size_with_genbanks_to_genomes(self): ws_obj_name = 'large_genome_with_g2g_mass' input_data = self._prep_input(gbk_path, ws_obj_name, g2g_mass=True) with self.assertRaisesRegex(ValueError, "This genome size of "): - self.serviceImpl.genbank_to_genome(self.ctx, input_data) + self.serviceImpl.genbanks_to_genomes(self.ctx, input_data) From be9621349e6dcb0d920d8b6be605ec55a20c3ee7 Mon Sep 17 00:00:00 2001 From: Sijie Date: Mon, 14 Jul 2025 12:03:39 -0700 Subject: [PATCH 45/70] update docString in save_genome_mass --- lib/GenomeFileUtil/core/GenomeInterface.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index e16b12e1..cfcab032 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -65,7 +65,7 @@ def save_genome_mass(self, params, validate_genome=False): genomes before saving. # NOTE If there is more than 1GB of data or more than 10,000 genomes to upload, - # the workspace will fail. + # the workspace service request will fail. Args: params (dict): A dictionary containing the parameters for saving the genomes. From f624b1102433837ab9b57656d42ff91f36107739 Mon Sep 17 00:00:00 2001 From: Sijie Date: Tue, 22 Jul 2025 20:43:55 -0700 Subject: [PATCH 46/70] link genbank file instead of JSON file --- scripts/run_tests_within_container.sh | 4 +++- test/problematic_tests/save_genome_test.py | 27 ++++++++++------------ 2 files changed, 15 insertions(+), 16 deletions(-) diff --git a/scripts/run_tests_within_container.sh b/scripts/run_tests_within_container.sh index b6c86a61..3fcc60ea 100644 --- a/scripts/run_tests_within_container.sh +++ b/scripts/run_tests_within_container.sh @@ -6,7 +6,9 @@ export PYTHONPATH=$script_dir/../lib:$PYTHONPATH export PYTHONPATH=$script_dir/../test:$PYTHONPATH # Set TEST_PATH to run a specific test. Eg: TEST_PATH=test.core.update_taxon_assignments_test -export TEST_PATH=. +export TEST_PATH=test.problematic_tests.save_genome_test +# export TEST_PATH=test.supplemental_genbank_tests.genbank_upload_full_test +# export TEST_PATH=test.core.toy_metagenome_tests cd $script_dir/../test python -m nose --with-coverage --cover-package=GenomeFileUtil --cover-html --cover-html-dir=/kb/module/work/test_coverage --cover-xml --cover-xml-file=/kb/module/work/test_coverage/coverage.xml --nocapture --nologcapture $TEST_PATH diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 8121216e..2b8e1695 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -238,13 +238,10 @@ def test_one_genome_with_hidden(self): self.check_hidden(genome_name) def _setup_handle(self, file_name): - # Save genome file to scratch dir - file_path = os.path.join(self.scratch, file_name) - with open(file_path, "w") as f: - json.dump(self.test_genome_data, f, indent=4) - - # Calculate expected md5sum - md5sum = calculate_md5sum(file_path) + # Copy local genbank file to scratch dir + local_genbank_path = "data/e_coli/Ecoli_spoofing_test_genome.gbff" + file_path = os.path.join(self.scratch, file_name) + shutil.copy2(local_genbank_path, file_path) # Upload to blobstore shock_ret = self.dfu.file_to_shock( @@ -257,19 +254,19 @@ def _setup_handle(self, file_name): # Return updated genome genome_with_handle_ref = deepcopy(self.test_genome_data) genome_with_handle_ref["genbank_handle_ref"] = shock_ret['handle']['hid'] - return genome_with_handle_ref, md5sum + return genome_with_handle_ref def test_genomes(self): self.start_test() - genome_name1 = 'e_coli_with_assembly_1.json' - genome_name2 = 'e_coli_with_assembly_2.json' + genome_name1 = 'e_coli_test_genome_1.gbff' + genome_name2 = 'e_coli_test_genome_2.gbff' - genome_with_handle_ref_1, genome1_md5sum = self._setup_handle(genome_name1) - genome_with_handle_ref_2, genome2_md5sum= self._setup_handle(genome_name2) + genome_with_genbank_handle_ref_1 = self._setup_handle(genome_name1) + genome_with_genbank_handle_ref_2 = self._setup_handle(genome_name2) file_names = [genome_name1, genome_name2] - expected_genome_md5sum = [genome1_md5sum, genome2_md5sum] + expected_genome_md5sum = ["457e38b607e3f4c5800cbe608abee12d", "457e38b607e3f4c5800cbe608abee12d"] genome_metas = [ { @@ -316,12 +313,12 @@ def test_genomes(self): inputs = [ { 'name': genome_name1, - 'data': genome_with_handle_ref_1, + 'data': genome_with_genbank_handle_ref_1, 'meta': {"foo": "zoo"} }, { 'name': genome_name2, - 'data': genome_with_handle_ref_2, + 'data': genome_with_genbank_handle_ref_2, 'meta': {"zoo": "foo"} } ] From 7fb8355be5c72267ba0eeb1b68864e45b0516cd3 Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 23 Jul 2025 11:46:19 -0700 Subject: [PATCH 47/70] check prov diff --- test/test_utils.py | 5 +++++ 1 file changed, 5 insertions(+) diff --git a/test/test_utils.py b/test/test_utils.py index f01f7f24..fa07afa0 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -130,6 +130,11 @@ def _check_assembly_upa(retrieved_upa, expected_upa): def _check_prov(obj, expected_provenance): provenance = obj["provenance"] retrieved_provenance = _retrieve_provenance(provenance) + + print(f"expected_provenance is: {expected_provenance}") + print("*" * 30) + print(f"retrieved_provenance is: {retrieved_provenance}") + assert retrieved_provenance == expected_provenance def _retrieve_provenance(provenance): From 79b44fd8a5b265af5959d3e604ceb1da236d7fe2 Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 23 Jul 2025 12:24:55 -0700 Subject: [PATCH 48/70] update prov --- test/problematic_tests/save_genome_test.py | 2 +- test/test_utils.py | 8 ++++---- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 2b8e1695..ef7a6b55 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -25,7 +25,7 @@ from GenomeFileUtil.authclient import KBaseAuth as _KBaseAuth from GenomeFileUtil.core.GenomeInterface import GenomeInterface from installed_clients.WorkspaceClient import Workspace as workspaceService -from test_utils import check_result_object_info_provenance_data, PROVENANCE, calculate_md5sum, load_expected_data +from test_utils import check_result_object_info_provenance_data, PROVENANCE, load_expected_data _KBASE_GENOME = "KBaseGenomes.Genome" _GENOME_FILE_WARNINGS = [ diff --git a/test/test_utils.py b/test/test_utils.py index fa07afa0..e8c48e45 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -35,10 +35,10 @@ "name": "DataFileUtil", "code_url": "https://github.com/kbaseapps/DataFileUtil", }, - { - "name": "GenomeAnnotationAPI", - "code_url": "https://github.com/kbase/genome_annotation_api", - }, + # { + # "name": "GenomeAnnotationAPI", + # "code_url": "https://github.com/kbase/genome_annotation_api", + # }, { "name": "WsLargeDataIO", "code_url": "https://github.com/kbaseapps/WsLargeDataIO", From 6f64bbd7212194849cf8cb2b3eb6a4a837b7cf95 Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 23 Jul 2025 12:51:13 -0700 Subject: [PATCH 49/70] update subactions dict in prov --- test/test_utils.py | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/test/test_utils.py b/test/test_utils.py index e8c48e45..2a13ae5e 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -27,14 +27,14 @@ "ver": "local-dev", "code_url": "https://localhost", }, - { - "name": "AssemblyUtil", - "code_url": "https://github.com/kbaseapps/AssemblyUtil", - }, { "name": "DataFileUtil", "code_url": "https://github.com/kbaseapps/DataFileUtil", }, + { + "name": "AssemblyUtil", + "code_url": "https://github.com/kbaseapps/AssemblyUtil", + }, # { # "name": "GenomeAnnotationAPI", # "code_url": "https://github.com/kbase/genome_annotation_api", From a3eaec2655af299f261d623c0edd36b077663d4f Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 23 Jul 2025 13:15:51 -0700 Subject: [PATCH 50/70] revert changes on run_tests_within_container.sh --- scripts/run_tests_within_container.sh | 4 +--- test/test_utils.py | 12 ++++++------ 2 files changed, 7 insertions(+), 9 deletions(-) diff --git a/scripts/run_tests_within_container.sh b/scripts/run_tests_within_container.sh index 3fcc60ea..b6c86a61 100644 --- a/scripts/run_tests_within_container.sh +++ b/scripts/run_tests_within_container.sh @@ -6,9 +6,7 @@ export PYTHONPATH=$script_dir/../lib:$PYTHONPATH export PYTHONPATH=$script_dir/../test:$PYTHONPATH # Set TEST_PATH to run a specific test. Eg: TEST_PATH=test.core.update_taxon_assignments_test -export TEST_PATH=test.problematic_tests.save_genome_test -# export TEST_PATH=test.supplemental_genbank_tests.genbank_upload_full_test -# export TEST_PATH=test.core.toy_metagenome_tests +export TEST_PATH=. cd $script_dir/../test python -m nose --with-coverage --cover-package=GenomeFileUtil --cover-html --cover-html-dir=/kb/module/work/test_coverage --cover-xml --cover-xml-file=/kb/module/work/test_coverage/coverage.xml --nocapture --nologcapture $TEST_PATH diff --git a/test/test_utils.py b/test/test_utils.py index 2a13ae5e..fa07afa0 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -27,18 +27,18 @@ "ver": "local-dev", "code_url": "https://localhost", }, + { + "name": "AssemblyUtil", + "code_url": "https://github.com/kbaseapps/AssemblyUtil", + }, { "name": "DataFileUtil", "code_url": "https://github.com/kbaseapps/DataFileUtil", }, { - "name": "AssemblyUtil", - "code_url": "https://github.com/kbaseapps/AssemblyUtil", + "name": "GenomeAnnotationAPI", + "code_url": "https://github.com/kbase/genome_annotation_api", }, - # { - # "name": "GenomeAnnotationAPI", - # "code_url": "https://github.com/kbase/genome_annotation_api", - # }, { "name": "WsLargeDataIO", "code_url": "https://github.com/kbaseapps/WsLargeDataIO", From f22ca6ab358027ff05faac85b3f357e4de5868d0 Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 23 Jul 2025 15:36:25 -0700 Subject: [PATCH 51/70] simplify check_hidden function --- test/problematic_tests/save_genome_test.py | 16 +++++++++------- 1 file changed, 9 insertions(+), 7 deletions(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index ef7a6b55..3b3febaf 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -189,16 +189,16 @@ def check_save_one_genome_output( # Check warnings self.assertEqual(ret['warnings'], warnings) - def check_hidden(self, target_genome_name): - object_list = self.wsClient.list_objects({'workspaces': [self.wsName]}) - genome_names = [object_info[1] for object_info in object_list] - self.assertNotIn(target_genome_name, genome_names) + def check_hidden(self, object_id): + object_list = self.wsClient.list_objects( + {'workspaces': [self.wsName], 'minObjectID': object_id, 'maxObjectID': object_id} + ) + self.assertFalse(object_list) object_list = self.wsClient.list_objects( - {'workspaces': [self.wsName], 'showHidden':1} + {'workspaces': [self.wsName], 'showHidden':1, 'minObjectID': object_id, 'maxObjectID': object_id} ) - genome_names = [object_info[1] for object_info in object_list] - self.assertIn(target_genome_name, genome_names) + self.assertTrue(object_list) def test_bad_one_genome_params(self): self.start_test() @@ -226,6 +226,7 @@ def test_one_genome_with_hidden(self): 'hidden': 1} ret = self.getImpl().save_one_genome(self.ctx, params)[0] self.check_save_one_genome_output(ret, genome_name) + print(f"ret is {ret}") self.check_hidden(genome_name) genome_name = 'test_genome_hidden_2' @@ -354,6 +355,7 @@ def test_genomes_with_hidden(self): params = {'workspace_id': self.wsID, 'inputs': inputs} ret = self.genome_interface.save_genome_mass(params)[0] self.check_save_one_genome_output(ret, genome_name, warnings=[]) + print(f"ret mass is {ret}") self.check_hidden(genome_name) genome_name = 'test_genomes_hidden_2' From 19ccfb5f6e08377e23fb4e7de21f6a14c96324a1 Mon Sep 17 00:00:00 2001 From: Sijie Date: Wed, 23 Jul 2025 16:28:32 -0700 Subject: [PATCH 52/70] pass in object_id --- test/problematic_tests/save_genome_test.py | 10 ++++------ test/test_utils.py | 6 +++--- 2 files changed, 7 insertions(+), 9 deletions(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 3b3febaf..a33644fe 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -226,8 +226,7 @@ def test_one_genome_with_hidden(self): 'hidden': 1} ret = self.getImpl().save_one_genome(self.ctx, params)[0] self.check_save_one_genome_output(ret, genome_name) - print(f"ret is {ret}") - self.check_hidden(genome_name) + self.check_hidden(ret["info"][0]) genome_name = 'test_genome_hidden_2' params = {'workspace': self.wsName, @@ -236,7 +235,7 @@ def test_one_genome_with_hidden(self): 'hidden': True} ret = self.getImpl().save_one_genome(self.ctx, params)[0] self.check_save_one_genome_output(ret, genome_name) - self.check_hidden(genome_name) + self.check_hidden(ret["info"][0]) def _setup_handle(self, file_name): # Copy local genbank file to scratch dir @@ -355,8 +354,7 @@ def test_genomes_with_hidden(self): params = {'workspace_id': self.wsID, 'inputs': inputs} ret = self.genome_interface.save_genome_mass(params)[0] self.check_save_one_genome_output(ret, genome_name, warnings=[]) - print(f"ret mass is {ret}") - self.check_hidden(genome_name) + self.check_hidden(ret["info"][0]) genome_name = 'test_genomes_hidden_2' inputs = [ @@ -369,7 +367,7 @@ def test_genomes_with_hidden(self): params = {'workspace_id': self.wsID, 'inputs': inputs} ret = self.genome_interface.save_genome_mass(params)[0] self.check_save_one_genome_output(ret, genome_name, warnings=[]) - self.check_hidden(genome_name) + self.check_hidden(ret["info"][0]) def test_bad_genomes_params_missing_parameter(self): self.start_test() diff --git a/test/test_utils.py b/test/test_utils.py index fa07afa0..431c94f8 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -198,7 +198,7 @@ def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref): file_path = file_ret['file_path'] retrieved_node_filename = file_ret['node_file_name'] - retrieved_genome_md5sum = calculate_md5sum(file_path) + retrieved_genome_md5sum = _calculate_md5sum(file_path) for ontology_event in data.get("ontology_events", []): ontology_event.pop("timestamp") @@ -229,7 +229,7 @@ def _retrieve_assembly_data(hs_client, dfu_client, scratch_dir, data): file_ret = _download_file_from_blobstore(dfu_client, scratch_dir, handle_id) file_path = file_ret['file_path'] retrieved_node_filename = file_ret['node_file_name'] - retrieved_assembly_md5sum = calculate_md5sum(file_path) + retrieved_assembly_md5sum = _calculate_md5sum(file_path) assert retrieved_assembly_md5sum == handle["remote_md5"] url = handle.get('url') @@ -250,7 +250,7 @@ def _download_file_from_blobstore(dfu_client, scratch_dir, handle_id): ) return file_ret -def calculate_md5sum(file_path): +def _calculate_md5sum(file_path): md5 = hashlib.md5() with open(file_path, "rb") as f: for chunk in iter(lambda: f.read(4096), b""): From c306fc6f121abd1d548d69a467d18173c2b34163 Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 25 Jul 2025 12:40:38 -0700 Subject: [PATCH 53/70] restore deleted AnnotatedMetagenomeAssembly code --- lib/GenomeFileUtil/core/GenomeInterface.py | 12 ++++++++++-- 1 file changed, 10 insertions(+), 2 deletions(-) diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index cfcab032..a59f5641 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -199,8 +199,11 @@ def _save_genome_mass(self, params, validate_genome=True): obj["name"] = name obj["meta"] = meta - if "AnnotatedMetagenomeAssembly" not in ws_datatype: - if input_params.get('upgrade') or 'feature_counts' not in data: + if "AnnotatedMetagenomeAssembly" in ws_datatype: + if params.get('upgrade') or 'feature_counts' not in data: + data = self._update_metagenome(data) + else: + if params.get('upgrade') or 'feature_counts' not in data: data = self._update_genome(data) # check all handles point to shock nodes owned by calling user @@ -262,6 +265,11 @@ def determine_tier(source): return "Ensembl", ['Representative', 'ExternalDB'] return source, ['User'] + def _update_metagenome(self, genome): + """Checks for missing required fields and fixes breaking changes""" + if 'molecule_type' not in genome: + genome['molecule_type'] = 'Unknown' + def _update_genome(self, genome): """Checks for missing required fields and fixes breaking changes""" # do top level updates From 948e3b1929c11a7e5a2856d9bbe5c44ee6cd2825 Mon Sep 17 00:00:00 2001 From: Sijie Date: Thu, 7 Aug 2025 00:04:14 -0700 Subject: [PATCH 54/70] 1.fix _update_metagenome bug; 2.update prepare_data function; 3.add test_genomes_with_upgrade --- lib/GenomeFileUtil/core/GenomeInterface.py | 1 + test/problematic_tests/save_genome_test.py | 111 +++++++++++++++++++-- test/test_utils.py | 51 ++++++++++ 3 files changed, 152 insertions(+), 11 deletions(-) diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index a59f5641..69768247 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -269,6 +269,7 @@ def _update_metagenome(self, genome): """Checks for missing required fields and fixes breaking changes""" if 'molecule_type' not in genome: genome['molecule_type'] = 'Unknown' + return genome def _update_genome(self, genome): """Checks for missing required fields and fixes breaking changes""" diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index a33644fe..b63e1a19 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -25,14 +25,19 @@ from GenomeFileUtil.authclient import KBaseAuth as _KBaseAuth from GenomeFileUtil.core.GenomeInterface import GenomeInterface from installed_clients.WorkspaceClient import Workspace as workspaceService -from test_utils import check_result_object_info_provenance_data, PROVENANCE, load_expected_data +from test_utils import check_result_object_info_provenance_data, PROVENANCE, METAGENOME, load_expected_data _KBASE_GENOME = "KBaseGenomes.Genome" +_KBASE_METAGENOME = "KBaseMetagenomes.AnnotatedMetagenomeAssembly" + _GENOME_FILE_WARNINGS = [ 'For prokaryotes, CDS array should generally be the same length as the Features array.', 'Genome molecule_type Unknown is not expected for domain Bacteria.', 'Unable to determine organism taxonomy' ] +_METAGENOME_FILE_WARNINGS = [ + 'SUSPECT: This genome has 20 genes that needed to be spoofed for existing parentless CDS.' +] class SaveGenomeTest(unittest.TestCase): @@ -129,15 +134,60 @@ def delete_shock_node(cls, node_id): @classmethod def prepare_data(cls): assembly_file_path = os.path.join(cls.scratch,'e_coli_assembly.fasta') + meta_file_path = os.path.join(cls.scratch,'metagenome.fa') + shutil.copy('data/e_coli/e_coli_assembly.fasta', assembly_file_path) + shutil.copy('data/metagenomes/toy/metagenome.fa', meta_file_path) + au = AssemblyUtil(os.environ['SDK_CALLBACK_URL']) - assembly_ref = au.save_assembly_from_fasta({ - 'workspace_name': cls.wsName, - 'assembly_name': 'e_coli.assembly', - 'file': {'path': assembly_file_path} - }) + assembly_refs = au.save_assemblies_from_fastas( + { + 'workspace_id': cls.wsID, + 'inputs': [ + { + 'assembly_name': 'e_coli.assembly', + 'file': assembly_file_path + }, + { + 'assembly_name': 'metagenome.assembly', + 'file': meta_file_path + } + ] + } + )["results"] + cls.test_genome_data = json.load(open('data/e_coli/e_coli.json')) - cls.test_genome_data['assembly_ref'] = assembly_ref + cls.test_genome_data['assembly_ref'] = assembly_refs[0]["upa"] + + cls.test_metagenome_data = METAGENOME + cls.test_metagenome_data['assembly_ref'] = assembly_refs[1]["upa"] + + # Define target paths in the shared folder + fhr_path = os.path.join(cls.scratch, 'features_handle_ref') + phr_path = os.path.join(cls.scratch, 'protein_handle_ref') + + # Create the files directly in the shared folder + with open(fhr_path, 'w', encoding='utf-8') as fhr_file: + fhr_file.write("test features_handle_ref") + + with open(phr_path, 'w', encoding='utf-8') as phr_file: + phr_file.write("test protein_handle_ref") + + # Upload files to the blobstore + handle_service_outputs = cls.dfu.file_to_shock_mass([ + {'file_path': fhr_path, 'make_handle': 1, 'pack': 'gzip'}, + {'file_path': phr_path, 'make_handle': 1, 'pack': 'gzip'} + ]) + + # Update metagenome + cls.test_metagenome_data["features_handle_ref"] = handle_service_outputs[0]["handle"]["hid"] + cls.test_metagenome_data["protein_handle_ref"] = handle_service_outputs[1]["handle"]["hid"] + + # Track shock_ids for cleanup + cls.nodes_to_delete.extend([ + handle_service_outputs[0]["shock_id"], + handle_service_outputs[1]["shock_id"] + ]) def getWsClient(self): return self.__class__.wsClient @@ -237,7 +287,7 @@ def test_one_genome_with_hidden(self): self.check_save_one_genome_output(ret, genome_name) self.check_hidden(ret["info"][0]) - def _setup_handle(self, file_name): + def _setup_handle(self, file_name, genome_data): # Copy local genbank file to scratch dir local_genbank_path = "data/e_coli/Ecoli_spoofing_test_genome.gbff" file_path = os.path.join(self.scratch, file_name) @@ -252,7 +302,7 @@ def _setup_handle(self, file_name): self.nodes_to_delete.append(shock_ret['shock_id']) # Return updated genome - genome_with_handle_ref = deepcopy(self.test_genome_data) + genome_with_handle_ref = deepcopy(genome_data) genome_with_handle_ref["genbank_handle_ref"] = shock_ret['handle']['hid'] return genome_with_handle_ref @@ -262,8 +312,8 @@ def test_genomes(self): genome_name1 = 'e_coli_test_genome_1.gbff' genome_name2 = 'e_coli_test_genome_2.gbff' - genome_with_genbank_handle_ref_1 = self._setup_handle(genome_name1) - genome_with_genbank_handle_ref_2 = self._setup_handle(genome_name2) + genome_with_genbank_handle_ref_1 = self._setup_handle(genome_name1, self.test_genome_data) + genome_with_genbank_handle_ref_2 = self._setup_handle(genome_name2, self.test_genome_data) file_names = [genome_name1, genome_name2] expected_genome_md5sum = ["457e38b607e3f4c5800cbe608abee12d", "457e38b607e3f4c5800cbe608abee12d"] @@ -369,6 +419,45 @@ def test_genomes_with_hidden(self): self.check_save_one_genome_output(ret, genome_name, warnings=[]) self.check_hidden(ret["info"][0]) + def test_genomes_with_upgrade(self): + self.start_test() + + genome_name = 'MyMetagenome' + metagenome_with_genbank_handle_ref = self._setup_handle(genome_name, self.test_metagenome_data) + + file_names = [genome_name] + expected_genome_md5sum = ["457e38b607e3f4c5800cbe608abee12d"] + genome_metas = [] + expected_genome_data = [] + + inputs = [ + { + 'name': genome_name, + 'data': metagenome_with_genbank_handle_ref, + 'workspace_datatype': _KBASE_METAGENOME, + 'meta': {"cat": "dog"}, + 'upgrade': True, + } + ] + params = {'workspace_id': self.wsID, 'inputs': inputs} + results = self.genome_interface.save_genome_mass(params) + + # check metagenome result + check_result_object_info_provenance_data( + results, + file_names, + self.scratch, + self.wsClient, + self.hs, + self.dfu, + self.wsID, + self.wsName, + genome_metas, + self.provenance, + expected_genome_data, + expected_genome_md5sum + ) + def test_bad_genomes_params_missing_parameter(self): self.start_test() invalidate_params = { diff --git a/test/test_utils.py b/test/test_utils.py index 431c94f8..04f2b34f 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -49,6 +49,57 @@ } ] +METAGENOME = { + "contig_ids": [ + "Ga0065724_100001" + ], + "contig_lengths": [ + 538871 + ], + "dna_size": 538871, + "domain": "Eukaryota", + "environment": None, + "external_source_origination_date": None, + "feature_counts": { + "CDS": 20, + "gene": 20, + "non_coding_features": 0, + "protein_encoding_gene": 20 + }, + "gc_content": 0.64469, + "genetic_code": 1, + "genome_type": "Metagenome", + "id": "MyMetagenome", + "md5": "e2ccbd5a9bed0148015bd6b784e3c1c3", + "molecule_type": "SingleLetterAlphabet", + "notes": None, + "num_contigs": 1, + "num_features": 40, + "ontologies_present": {}, + "ontology_events": [ + { + "id": "GO", + "method": "GenomeFileUtils Genbank uploader from annotations", + "method_version": "0.11.7", + "ontology_ref": "KBaseOntology/gene_ontology", + "timestamp": "2024_09_05_06_45_31" + } + ], + "original_source_file_name": None, + "publications": [], + "scientific_name": "Arabidopsis thaliana", + "source": "GFF", + "source_id": "unknown", + "suspect": 1, + "taxon_assignments": { + "ncbi": "3702" + }, + "taxonomy": "cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis", + "warnings": [ + "SUSPECT: This genome has 20 genes that needed to be spoofed for existing parentless CDS." + ] +} + def check_result_object_info_provenance_data( results, file_names, From b626756e8712989e8595c5dca69e8b00dd052dc4 Mon Sep 17 00:00:00 2001 From: Sijie Date: Thu, 7 Aug 2025 08:48:09 -0700 Subject: [PATCH 55/70] display genome info --- scripts/run_tests_within_container.sh | 3 ++- test/problematic_tests/save_genome_test.py | 23 ++++++++++------------ test/test_utils.py | 5 ++++- 3 files changed, 16 insertions(+), 15 deletions(-) diff --git a/scripts/run_tests_within_container.sh b/scripts/run_tests_within_container.sh index b6c86a61..87c9adbc 100644 --- a/scripts/run_tests_within_container.sh +++ b/scripts/run_tests_within_container.sh @@ -6,7 +6,8 @@ export PYTHONPATH=$script_dir/../lib:$PYTHONPATH export PYTHONPATH=$script_dir/../test:$PYTHONPATH # Set TEST_PATH to run a specific test. Eg: TEST_PATH=test.core.update_taxon_assignments_test -export TEST_PATH=. +# export TEST_PATH=. +export TEST_PATH=test.problematic_tests.save_genome_test cd $script_dir/../test python -m nose --with-coverage --cover-package=GenomeFileUtil --cover-html --cover-html-dir=/kb/module/work/test_coverage --cover-xml --cover-xml-file=/kb/module/work/test_coverage/coverage.xml --nocapture --nologcapture $TEST_PATH diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index b63e1a19..a67b7680 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -35,9 +35,6 @@ 'Genome molecule_type Unknown is not expected for domain Bacteria.', 'Unable to determine organism taxonomy' ] -_METAGENOME_FILE_WARNINGS = [ - 'SUSPECT: This genome has 20 genes that needed to be spoofed for existing parentless CDS.' -] class SaveGenomeTest(unittest.TestCase): @@ -250,7 +247,7 @@ def check_hidden(self, object_id): ) self.assertTrue(object_list) - def test_bad_one_genome_params(self): + def yest_bad_one_genome_params(self): self.start_test() invalidate_params = {'missing_workspace': 'workspace', 'name': 'name', @@ -258,7 +255,7 @@ def test_bad_one_genome_params(self): error_msg = "Exactly one of a 'workspace_id' or a 'workspace' parameter must be provided" self.fail_save_genome(invalidate_params, error_msg) - def test_one_genome(self): + def yest_one_genome(self): self.start_test() genome_name = 'test_genome' params = {'workspace': self.wsName, @@ -267,7 +264,7 @@ def test_one_genome(self): ret = self.getImpl().save_one_genome(self.ctx, params)[0] self.check_save_one_genome_output(ret, genome_name) - def test_one_genome_with_hidden(self): + def yest_one_genome_with_hidden(self): self.start_test() genome_name = 'test_genome_hidden_1' params = {'workspace': self.wsName, @@ -306,7 +303,7 @@ def _setup_handle(self, file_name, genome_data): genome_with_handle_ref["genbank_handle_ref"] = shock_ret['handle']['hid'] return genome_with_handle_ref - def test_genomes(self): + def yest_genomes(self): self.start_test() genome_name1 = 'e_coli_test_genome_1.gbff' @@ -391,7 +388,7 @@ def test_genomes(self): expected_genome_md5sum ) - def test_genomes_with_hidden(self): + def yest_genomes_with_hidden(self): self.start_test() genome_name = 'test_genomes_hidden_1' inputs = [ @@ -427,8 +424,8 @@ def test_genomes_with_upgrade(self): file_names = [genome_name] expected_genome_md5sum = ["457e38b607e3f4c5800cbe608abee12d"] - genome_metas = [] - expected_genome_data = [] + genome_metas = [{}] + expected_genome_data = [{}] inputs = [ { @@ -458,7 +455,7 @@ def test_genomes_with_upgrade(self): expected_genome_md5sum ) - def test_bad_genomes_params_missing_parameter(self): + def yest_bad_genomes_params_missing_parameter(self): self.start_test() invalidate_params = { 'workspace_id': self.wsID, @@ -467,7 +464,7 @@ def test_bad_genomes_params_missing_parameter(self): error_msg = "Entry #1 in inputs field has invalid params: name parameter is required, but missing" self.fail_save_genome(invalidate_params, error_msg, mass=True) - def test_GenomeInterface_check_dna_sequence_in_features(self): + def yest_GenomeInterface_check_dna_sequence_in_features(self): # no feature in genome genome = {'missing_features': 'features'} copied_genome = genome.copy() @@ -494,7 +491,7 @@ def test_GenomeInterface_check_dna_sequence_in_features(self): self.assertTrue(feature_dna_sum > 3000000) self.assertEqual(copied_genome, self.test_genome_data) - def test_GenomeInterface_own_handle(self): + def yest_GenomeInterface_own_handle(self): # no handle in genome genome = {'missing_genbank_handle_ref': 'hid'} origin_genome = genome.copy() diff --git a/test/test_utils.py b/test/test_utils.py index 04f2b34f..8cb92b8d 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -119,7 +119,7 @@ def check_result_object_info_provenance_data( expected_info, ref, expected_assembly_upa = _get_info_and_ref(res, is_genome) obj = _get_object(ws_client, ref) _check_info(obj, file_names[idx], expected_metadata[idx], expected_wsID, expected_wsName, expected_info, expected_assembly_upa, is_genome) - _check_prov(obj, expected_provenance) + # _check_prov(obj, expected_provenance) _check_data(obj, file_names[idx], scratch_dir, hs_client, dfu_client, expected_data[idx], expected_md5sum[idx], expected_assembly_upa, is_genome) def _get_info_and_ref(result, is_genome): @@ -149,6 +149,9 @@ def _get_object(ws_client, ref): def _check_info(obj, file_name, expected_metadata, expected_wsID, expected_wsName, expected_info, expected_assembly_upa, is_genome): info = obj["info"] + print("-----------") + print(info) + print("-----------") object_name = file_name if is_genome else file_name + "_assembly" object_type = 'KBaseGenomes.Genome' if is_genome else 'KBaseGenomeAnnotations.Assembly' retrieved_metadata = _retrieve_genome_metadata(info[10], expected_assembly_upa) if is_genome else info[10] From 5378631bb9a49609662a91ad2fcfbac50e031da1 Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 8 Aug 2025 11:08:21 -0700 Subject: [PATCH 56/70] refactor _get_object_type logic --- test/problematic_tests/save_genome_test.py | 17 +++++++++++++++-- test/test_utils.py | 15 +++++++++++++-- 2 files changed, 28 insertions(+), 4 deletions(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index a67b7680..4ec0d69e 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -424,7 +424,19 @@ def test_genomes_with_upgrade(self): file_names = [genome_name] expected_genome_md5sum = ["457e38b607e3f4c5800cbe608abee12d"] - genome_metas = [{}] + genome_metas = [ + { + 'GC content': '0.64469', + 'Source ID': 'unknown', + 'Size': '538871', + 'cat': 'dog', + 'Number features': '40', + 'Number contigs': '1', + 'Number of Warnings': '1', + 'Source': 'GFF', + 'MD5': 'e2ccbd5a9bed0148015bd6b784e3c1c3' + } + ] expected_genome_data = [{}] inputs = [ @@ -452,7 +464,8 @@ def test_genomes_with_upgrade(self): genome_metas, self.provenance, expected_genome_data, - expected_genome_md5sum + expected_genome_md5sum, + is_metagenome=True ) def yest_bad_genomes_params_missing_parameter(self): diff --git a/test/test_utils.py b/test/test_utils.py index 8cb92b8d..afb9e70a 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -114,6 +114,7 @@ def check_result_object_info_provenance_data( expected_data, expected_md5sum, is_genome=True, + is_metagenome=False ): for idx, res in enumerate(results): expected_info, ref, expected_assembly_upa = _get_info_and_ref(res, is_genome) @@ -147,13 +148,13 @@ def _get_object(ws_client, ref): assert _OBJECT_VERSION_PATTERN.match(ref) return ws_client.get_objects2({"objects": [{'ref': ref}]})["data"][0] -def _check_info(obj, file_name, expected_metadata, expected_wsID, expected_wsName, expected_info, expected_assembly_upa, is_genome): +def _check_info(obj, file_name, expected_metadata, expected_wsID, expected_wsName, expected_info, expected_assembly_upa, is_genome, is_metagenome): info = obj["info"] print("-----------") print(info) print("-----------") object_name = file_name if is_genome else file_name + "_assembly" - object_type = 'KBaseGenomes.Genome' if is_genome else 'KBaseGenomeAnnotations.Assembly' + object_type = _get_object_type(is_genome, is_metagenome) retrieved_metadata = _retrieve_genome_metadata(info[10], expected_assembly_upa) if is_genome else info[10] assert info == expected_info @@ -170,6 +171,13 @@ def _check_info(obj, file_name, expected_metadata, expected_wsID, expected_wsNam # check metadata assert retrieved_metadata == expected_metadata +def _get_object_type(is_genome, is_metagenome): + if is_metagenome: + return "KBaseMetagenomes.AnnotatedMetagenomeAssembly" + if is_genome: + return "KBaseGenomes.Genome" + return "KBaseGenomeAnnotations.Assembly" + def _retrieve_genome_metadata(metadata, expected_assembly_upa): # make a deep copy to avoid modifying the original metadata metadata = deepcopy(metadata) @@ -229,6 +237,9 @@ def _check_data( else file_name + "_assembly.fasta" ) + print("*" * 20) + print(retrieved_data) + print("*" * 20) assert retrieved_data == expected_data assert retrieved_md5sum == expected_md5sum assert retrieved_node_filename == expected_node_filename From ef95de7f2f30171b7af3ad85c538614266f40d56 Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 8 Aug 2025 11:29:39 -0700 Subject: [PATCH 57/70] add missing param --- test/test_utils.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/test/test_utils.py b/test/test_utils.py index afb9e70a..36c20d3e 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -119,7 +119,7 @@ def check_result_object_info_provenance_data( for idx, res in enumerate(results): expected_info, ref, expected_assembly_upa = _get_info_and_ref(res, is_genome) obj = _get_object(ws_client, ref) - _check_info(obj, file_names[idx], expected_metadata[idx], expected_wsID, expected_wsName, expected_info, expected_assembly_upa, is_genome) + _check_info(obj, file_names[idx], expected_metadata[idx], expected_wsID, expected_wsName, expected_info, expected_assembly_upa, is_genome, is_metagenome) # _check_prov(obj, expected_provenance) _check_data(obj, file_names[idx], scratch_dir, hs_client, dfu_client, expected_data[idx], expected_md5sum[idx], expected_assembly_upa, is_genome) From fafc88605294a47567735504255abe412493cb67 Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 8 Aug 2025 11:44:34 -0700 Subject: [PATCH 58/70] display data info --- test/test_utils.py | 2 ++ 1 file changed, 2 insertions(+) diff --git a/test/test_utils.py b/test/test_utils.py index 36c20d3e..2c891626 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -248,6 +248,8 @@ def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref): # make a deep copy to avoid modifying the original genome data data = deepcopy(data) + print(f"data is {data}") + for key in ["cdss", "features", "mrnas", "non_coding_features"]: for dist in data.get(key): if dist.get("aliases"): From e7d0e0452458bcaebd8bbbca73a7a1db10910d77 Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 8 Aug 2025 12:01:14 -0700 Subject: [PATCH 59/70] fix missing key bug --- test/test_utils.py | 7 +------ 1 file changed, 1 insertion(+), 6 deletions(-) diff --git a/test/test_utils.py b/test/test_utils.py index 2c891626..461b4609 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -192,11 +192,6 @@ def _check_assembly_upa(retrieved_upa, expected_upa): def _check_prov(obj, expected_provenance): provenance = obj["provenance"] retrieved_provenance = _retrieve_provenance(provenance) - - print(f"expected_provenance is: {expected_provenance}") - print("*" * 30) - print(f"retrieved_provenance is: {retrieved_provenance}") - assert retrieved_provenance == expected_provenance def _retrieve_provenance(provenance): @@ -251,7 +246,7 @@ def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref): print(f"data is {data}") for key in ["cdss", "features", "mrnas", "non_coding_features"]: - for dist in data.get(key): + for dist in data.get(key, []): if dist.get("aliases"): dist["aliases"] = sorted(dist["aliases"]) From 0ae6e9dcc74c2ab0b8869a12f0c048a36ca97a74 Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 8 Aug 2025 12:22:57 -0700 Subject: [PATCH 60/70] add expected_genome_data --- test/problematic_tests/save_genome_test.py | 47 +++++++++++++++++++++- 1 file changed, 46 insertions(+), 1 deletion(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 4ec0d69e..2bec63c4 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -437,7 +437,52 @@ def test_genomes_with_upgrade(self): 'MD5': 'e2ccbd5a9bed0148015bd6b784e3c1c3' } ] - expected_genome_data = [{}] + expected_genome_data = [ + { + "contig_ids": ["Ga0065724_100001"], + "contig_lengths": [538871], + "dna_size": 538871, + "domain": "Eukaryota", + "environment": None, + "external_source_origination_date": None, + "feature_counts": { + "CDS": 20, + "gene": 20, + "non_coding_features": 0, + "protein_encoding_gene": 20, + }, + "features_handle_ref": "KBH_743550", + "gc_content": 0.64469, + "genetic_code": 1, + "genome_type": "Metagenome", + "id": "MyMetagenome", + "md5": "e2ccbd5a9bed0148015bd6b784e3c1c3", + "molecule_type": "SingleLetterAlphabet", + "notes": None, + "num_contigs": 1, + "num_features": 40, + "ontologies_present": {}, + "ontology_events": [ + { + "id": "GO", + "method": "GenomeFileUtils Genbank uploader from annotations", + "method_version": "0.11.7", + } + ], + "original_source_file_name": None, + "protein_handle_ref": "KBH_743551", + "publications": [], + "scientific_name": "Arabidopsis thaliana", + "source": "GFF", + "source_id": "unknown", + "suspect": 1, + "taxon_assignments": {"ncbi": "3702"}, + "taxonomy": "cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis", + "warnings": [ + "SUSPECT: This genome has 20 genes that needed to be spoofed for existing parentless CDS." + ], + } + ] inputs = [ { From 6f0f0f76f8384bee36df6fb4ab25c366f63a5d8f Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 8 Aug 2025 14:45:20 -0700 Subject: [PATCH 61/70] pop features_handle_ref and protein_handle_ref --- test/test_utils.py | 11 ++++++++--- 1 file changed, 8 insertions(+), 3 deletions(-) diff --git a/test/test_utils.py b/test/test_utils.py index 461b4609..c194e5b5 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -216,12 +216,13 @@ def _check_data( expected_data, expected_md5sum, expected_assembly_ref, - is_genome + is_genome, + is_metagenome ): data = obj["data"] retrieved_data, retrieved_md5sum, retrieved_node_filename = ( - _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref) + _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref, is_metagenome) if is_genome else _retrieve_assembly_data(hs_client, dfu_client, scratch_dir, data) ) @@ -239,7 +240,7 @@ def _check_data( assert retrieved_md5sum == expected_md5sum assert retrieved_node_filename == expected_node_filename -def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref): +def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref, is_metagenome): # make a deep copy to avoid modifying the original genome data data = deepcopy(data) @@ -267,6 +268,10 @@ def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref): ontology_ref = ontology_event.pop("ontology_ref") assert _UPA_PATTERN.match(ontology_ref) + if is_metagenome: + data.pop("features_handle_ref") + data.pop("protein_handle_ref") + return data, retrieved_genome_md5sum, retrieved_node_filename def _retrieve_assembly_data(hs_client, dfu_client, scratch_dir, data): From 6abafd6bdae52b660e3c5c37f1b2b5818e39feb0 Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 8 Aug 2025 14:54:46 -0700 Subject: [PATCH 62/70] add missing is_metagenome param in _check_data --- test/test_utils.py | 11 ++++++----- 1 file changed, 6 insertions(+), 5 deletions(-) diff --git a/test/test_utils.py b/test/test_utils.py index c194e5b5..7f8387d7 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -121,7 +121,7 @@ def check_result_object_info_provenance_data( obj = _get_object(ws_client, ref) _check_info(obj, file_names[idx], expected_metadata[idx], expected_wsID, expected_wsName, expected_info, expected_assembly_upa, is_genome, is_metagenome) # _check_prov(obj, expected_provenance) - _check_data(obj, file_names[idx], scratch_dir, hs_client, dfu_client, expected_data[idx], expected_md5sum[idx], expected_assembly_upa, is_genome) + _check_data(obj, file_names[idx], scratch_dir, hs_client, dfu_client, expected_data[idx], expected_md5sum[idx], expected_assembly_upa, is_genome, is_metagenome) def _get_info_and_ref(result, is_genome): # Process the result returned by import_genbank_mass @@ -255,6 +255,11 @@ def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref, assert _UPA_PATTERN.match(retrieved_assembly_ref) assert retrieved_assembly_ref == expected_assembly_ref + # remove features_handle_ref and protein_handle_ref + if is_metagenome: + data.pop("features_handle_ref") + data.pop("protein_handle_ref") + # check handle ref handle_id = data.pop("genbank_handle_ref") file_ret = _download_file_from_blobstore(dfu_client, scratch_dir, handle_id) @@ -268,10 +273,6 @@ def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref, ontology_ref = ontology_event.pop("ontology_ref") assert _UPA_PATTERN.match(ontology_ref) - if is_metagenome: - data.pop("features_handle_ref") - data.pop("protein_handle_ref") - return data, retrieved_genome_md5sum, retrieved_node_filename def _retrieve_assembly_data(hs_client, dfu_client, scratch_dir, data): From ab8b829706f17b673064d913bf718e6bcdcf0385 Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 8 Aug 2025 15:04:14 -0700 Subject: [PATCH 63/70] pass in correct expected_data --- test/problematic_tests/save_genome_test.py | 2 -- 1 file changed, 2 deletions(-) diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 2bec63c4..9f9468ed 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -451,7 +451,6 @@ def test_genomes_with_upgrade(self): "non_coding_features": 0, "protein_encoding_gene": 20, }, - "features_handle_ref": "KBH_743550", "gc_content": 0.64469, "genetic_code": 1, "genome_type": "Metagenome", @@ -470,7 +469,6 @@ def test_genomes_with_upgrade(self): } ], "original_source_file_name": None, - "protein_handle_ref": "KBH_743551", "publications": [], "scientific_name": "Arabidopsis thaliana", "source": "GFF", From f5f6aee98c61e70aa389aa6bfa731e1a929506bd Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 8 Aug 2025 15:36:31 -0700 Subject: [PATCH 64/70] finish updating metagenome test --- scripts/run_tests_within_container.sh | 4 ++-- test/problematic_tests/save_genome_test.py | 16 ++++++++-------- test/test_utils.py | 19 +++++++------------ 3 files changed, 17 insertions(+), 22 deletions(-) diff --git a/scripts/run_tests_within_container.sh b/scripts/run_tests_within_container.sh index 87c9adbc..48d3d583 100644 --- a/scripts/run_tests_within_container.sh +++ b/scripts/run_tests_within_container.sh @@ -6,8 +6,8 @@ export PYTHONPATH=$script_dir/../lib:$PYTHONPATH export PYTHONPATH=$script_dir/../test:$PYTHONPATH # Set TEST_PATH to run a specific test. Eg: TEST_PATH=test.core.update_taxon_assignments_test -# export TEST_PATH=. -export TEST_PATH=test.problematic_tests.save_genome_test +export TEST_PATH=. +# export TEST_PATH=test.problematic_tests.save_genome_test cd $script_dir/../test python -m nose --with-coverage --cover-package=GenomeFileUtil --cover-html --cover-html-dir=/kb/module/work/test_coverage --cover-xml --cover-xml-file=/kb/module/work/test_coverage/coverage.xml --nocapture --nologcapture $TEST_PATH diff --git a/test/problematic_tests/save_genome_test.py b/test/problematic_tests/save_genome_test.py index 9f9468ed..84ebbc47 100644 --- a/test/problematic_tests/save_genome_test.py +++ b/test/problematic_tests/save_genome_test.py @@ -247,7 +247,7 @@ def check_hidden(self, object_id): ) self.assertTrue(object_list) - def yest_bad_one_genome_params(self): + def test_bad_one_genome_params(self): self.start_test() invalidate_params = {'missing_workspace': 'workspace', 'name': 'name', @@ -255,7 +255,7 @@ def yest_bad_one_genome_params(self): error_msg = "Exactly one of a 'workspace_id' or a 'workspace' parameter must be provided" self.fail_save_genome(invalidate_params, error_msg) - def yest_one_genome(self): + def test_one_genome(self): self.start_test() genome_name = 'test_genome' params = {'workspace': self.wsName, @@ -264,7 +264,7 @@ def yest_one_genome(self): ret = self.getImpl().save_one_genome(self.ctx, params)[0] self.check_save_one_genome_output(ret, genome_name) - def yest_one_genome_with_hidden(self): + def test_one_genome_with_hidden(self): self.start_test() genome_name = 'test_genome_hidden_1' params = {'workspace': self.wsName, @@ -303,7 +303,7 @@ def _setup_handle(self, file_name, genome_data): genome_with_handle_ref["genbank_handle_ref"] = shock_ret['handle']['hid'] return genome_with_handle_ref - def yest_genomes(self): + def test_genomes(self): self.start_test() genome_name1 = 'e_coli_test_genome_1.gbff' @@ -388,7 +388,7 @@ def yest_genomes(self): expected_genome_md5sum ) - def yest_genomes_with_hidden(self): + def test_genomes_with_hidden(self): self.start_test() genome_name = 'test_genomes_hidden_1' inputs = [ @@ -511,7 +511,7 @@ def test_genomes_with_upgrade(self): is_metagenome=True ) - def yest_bad_genomes_params_missing_parameter(self): + def test_bad_genomes_params_missing_parameter(self): self.start_test() invalidate_params = { 'workspace_id': self.wsID, @@ -520,7 +520,7 @@ def yest_bad_genomes_params_missing_parameter(self): error_msg = "Entry #1 in inputs field has invalid params: name parameter is required, but missing" self.fail_save_genome(invalidate_params, error_msg, mass=True) - def yest_GenomeInterface_check_dna_sequence_in_features(self): + def test_GenomeInterface_check_dna_sequence_in_features(self): # no feature in genome genome = {'missing_features': 'features'} copied_genome = genome.copy() @@ -547,7 +547,7 @@ def yest_GenomeInterface_check_dna_sequence_in_features(self): self.assertTrue(feature_dna_sum > 3000000) self.assertEqual(copied_genome, self.test_genome_data) - def yest_GenomeInterface_own_handle(self): + def test_GenomeInterface_own_handle(self): # no handle in genome genome = {'missing_genbank_handle_ref': 'hid'} origin_genome = genome.copy() diff --git a/test/test_utils.py b/test/test_utils.py index 7f8387d7..de243cfd 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -120,7 +120,7 @@ def check_result_object_info_provenance_data( expected_info, ref, expected_assembly_upa = _get_info_and_ref(res, is_genome) obj = _get_object(ws_client, ref) _check_info(obj, file_names[idx], expected_metadata[idx], expected_wsID, expected_wsName, expected_info, expected_assembly_upa, is_genome, is_metagenome) - # _check_prov(obj, expected_provenance) + _check_prov(obj, expected_provenance) _check_data(obj, file_names[idx], scratch_dir, hs_client, dfu_client, expected_data[idx], expected_md5sum[idx], expected_assembly_upa, is_genome, is_metagenome) def _get_info_and_ref(result, is_genome): @@ -150,9 +150,6 @@ def _get_object(ws_client, ref): def _check_info(obj, file_name, expected_metadata, expected_wsID, expected_wsName, expected_info, expected_assembly_upa, is_genome, is_metagenome): info = obj["info"] - print("-----------") - print(info) - print("-----------") object_name = file_name if is_genome else file_name + "_assembly" object_type = _get_object_type(is_genome, is_metagenome) retrieved_metadata = _retrieve_genome_metadata(info[10], expected_assembly_upa) if is_genome else info[10] @@ -233,9 +230,6 @@ def _check_data( else file_name + "_assembly.fasta" ) - print("*" * 20) - print(retrieved_data) - print("*" * 20) assert retrieved_data == expected_data assert retrieved_md5sum == expected_md5sum assert retrieved_node_filename == expected_node_filename @@ -244,8 +238,6 @@ def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref, # make a deep copy to avoid modifying the original genome data data = deepcopy(data) - print(f"data is {data}") - for key in ["cdss", "features", "mrnas", "non_coding_features"]: for dist in data.get(key, []): if dist.get("aliases"): @@ -255,10 +247,13 @@ def _retrieve_genome_data(dfu_client, scratch_dir, data, expected_assembly_ref, assert _UPA_PATTERN.match(retrieved_assembly_ref) assert retrieved_assembly_ref == expected_assembly_ref - # remove features_handle_ref and protein_handle_ref + # check features_handle_ref and protein_handle_ref if is_metagenome: - data.pop("features_handle_ref") - data.pop("protein_handle_ref") + features_handle_ref = data.pop("features_handle_ref") + protein_handle_ref = data.pop("protein_handle_ref") + + assert features_handle_ref.split("_")[0] == "KBH" + assert protein_handle_ref.split("_")[0] == "KBH" # check handle ref handle_id = data.pop("genbank_handle_ref") From d360fdae7982ffafaf6dc4f2a9c503c0c59a9e1d Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 8 Aug 2025 16:29:09 -0700 Subject: [PATCH 65/70] fix params bug --- lib/GenomeFileUtil/core/GenomeInterface.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/lib/GenomeFileUtil/core/GenomeInterface.py b/lib/GenomeFileUtil/core/GenomeInterface.py index 69768247..1479b11c 100644 --- a/lib/GenomeFileUtil/core/GenomeInterface.py +++ b/lib/GenomeFileUtil/core/GenomeInterface.py @@ -200,10 +200,10 @@ def _save_genome_mass(self, params, validate_genome=True): obj["meta"] = meta if "AnnotatedMetagenomeAssembly" in ws_datatype: - if params.get('upgrade') or 'feature_counts' not in data: + if input_params.get('upgrade') or 'feature_counts' not in data: data = self._update_metagenome(data) else: - if params.get('upgrade') or 'feature_counts' not in data: + if input_params.get('upgrade') or 'feature_counts' not in data: data = self._update_genome(data) # check all handles point to shock nodes owned by calling user From e30e0e108fe4c899a46235866d55bd3cb5d21baa Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 15 Aug 2025 14:21:15 -0700 Subject: [PATCH 66/70] refactor current genome_size_tests script and setup for mass saves test --- scripts/run_tests_within_container.sh | 4 +-- test/utility/genome_size_tests.py | 40 ++++++++++++++++++--------- 2 files changed, 29 insertions(+), 15 deletions(-) diff --git a/scripts/run_tests_within_container.sh b/scripts/run_tests_within_container.sh index 48d3d583..5a226aff 100644 --- a/scripts/run_tests_within_container.sh +++ b/scripts/run_tests_within_container.sh @@ -6,8 +6,8 @@ export PYTHONPATH=$script_dir/../lib:$PYTHONPATH export PYTHONPATH=$script_dir/../test:$PYTHONPATH # Set TEST_PATH to run a specific test. Eg: TEST_PATH=test.core.update_taxon_assignments_test -export TEST_PATH=. -# export TEST_PATH=test.problematic_tests.save_genome_test +# export TEST_PATH=. +export TEST_PATH=test.utility.genome_size_tests cd $script_dir/../test python -m nose --with-coverage --cover-package=GenomeFileUtil --cover-html --cover-html-dir=/kb/module/work/test_coverage --cover-xml --cover-xml-file=/kb/module/work/test_coverage/coverage.xml --nocapture --nologcapture $TEST_PATH diff --git a/test/utility/genome_size_tests.py b/test/utility/genome_size_tests.py index aad28f2f..fb2e36a1 100644 --- a/test/utility/genome_size_tests.py +++ b/test/utility/genome_size_tests.py @@ -68,11 +68,19 @@ def _prep_input(self, gbk_path, ws_obj_name, g2g_mass=False): def test_full_sequence(self): # features should not have sequences in it. But both non_coding_features and CDSs should have sequences. print("test_full_sequence") - gbk_path = "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff" - ws_obj_name = 'full_sequence' + self._test_sequence( + "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff", + "full_sequence", + self.serviceImpl.genbank_to_genome, + self._check_full_sequence + ) + + def _test_sequence(self, gbk_path, ws_obj_name, g2g_func, check_seq_func): input_data = self._prep_input(gbk_path, ws_obj_name) - result = self.serviceImpl.genbank_to_genome(self.ctx, input_data)[0] + result = g2g_func(self.ctx, input_data)[0] + check_seq_func(result) + def _check_full_sequence(self, result): genome = self.dfuClient.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] count_features_without_dna_sequence = 0 for feature in genome['features']: @@ -97,11 +105,14 @@ def test_full_sequence(self): def test_partial_sequence(self): # features should not have sequences in it. But both non_coding_features and CDSs should have sequences. print("test_partial_sequence") - gbk_path = "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff" - ws_obj_name = 'partial_sequence' - input_data = self._prep_input(gbk_path, ws_obj_name) - result = self.serviceImpl.genbank_to_genome(self.ctx, input_data)[0] - + self._test_sequence( + "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff", + "partial_sequence", + self.serviceImpl.genbank_to_genome, + self._check_partial_sequence + ) + + def _check_partial_sequence(self, result): genome = self.dfuClient.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] count_features_with_dna_sequence = 0 for feature in genome['features']: @@ -126,11 +137,14 @@ def test_partial_sequence(self): def test_no_sequence_kept(self): # features, cds, and non_coding_features should not have sequences in it. print("test_no_sequence_kept") - gbk_path = "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff" - ws_obj_name = 'no_sequence' - input_data = self._prep_input(gbk_path, ws_obj_name) - result = self.serviceImpl.genbank_to_genome(self.ctx, input_data)[0] - + self._test_sequence( + "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff", + "no_sequence", + self.serviceImpl.genbank_to_genome, + self._check_no_sequence + ) + + def _check_no_sequence(self, result): genome = self.dfuClient.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] count_features_with_dna_sequence = 0 for feature in genome['features']: From 8dc7b37e5fd918e56e27e7b87d6575357028a4a8 Mon Sep 17 00:00:00 2001 From: Sijie Date: Fri, 15 Aug 2025 15:36:58 -0700 Subject: [PATCH 67/70] run all tests --- scripts/run_tests_within_container.sh | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/scripts/run_tests_within_container.sh b/scripts/run_tests_within_container.sh index 5a226aff..b6c86a61 100644 --- a/scripts/run_tests_within_container.sh +++ b/scripts/run_tests_within_container.sh @@ -6,8 +6,7 @@ export PYTHONPATH=$script_dir/../lib:$PYTHONPATH export PYTHONPATH=$script_dir/../test:$PYTHONPATH # Set TEST_PATH to run a specific test. Eg: TEST_PATH=test.core.update_taxon_assignments_test -# export TEST_PATH=. -export TEST_PATH=test.utility.genome_size_tests +export TEST_PATH=. cd $script_dir/../test python -m nose --with-coverage --cover-package=GenomeFileUtil --cover-html --cover-html-dir=/kb/module/work/test_coverage --cover-xml --cover-xml-file=/kb/module/work/test_coverage/coverage.xml --nocapture --nologcapture $TEST_PATH From 1571b43a5fcebd1b4576b7c730687250753801ab Mon Sep 17 00:00:00 2001 From: Sijie Date: Mon, 25 Aug 2025 16:10:51 -0700 Subject: [PATCH 68/70] Uses a flag (g2g_mass) to determine which method to call inside a patched context --- test/utility/genome_size_tests.py | 11 ++++++----- 1 file changed, 6 insertions(+), 5 deletions(-) diff --git a/test/utility/genome_size_tests.py b/test/utility/genome_size_tests.py index fb2e36a1..e5d9b744 100644 --- a/test/utility/genome_size_tests.py +++ b/test/utility/genome_size_tests.py @@ -71,13 +71,16 @@ def test_full_sequence(self): self._test_sequence( "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff", "full_sequence", - self.serviceImpl.genbank_to_genome, self._check_full_sequence ) - def _test_sequence(self, gbk_path, ws_obj_name, g2g_func, check_seq_func): + def _test_sequence(self, gbk_path, ws_obj_name, check_seq_func, g2g_mass=False): input_data = self._prep_input(gbk_path, ws_obj_name) - result = g2g_func(self.ctx, input_data)[0] + if g2g_mass: + result = self.serviceImpl.genbanks_to_genomes(self.ctx, input_data)[0] + else: + result = self.serviceImpl.genbank_to_genome(self.ctx, input_data)[0] + check_seq_func(result) def _check_full_sequence(self, result): @@ -108,7 +111,6 @@ def test_partial_sequence(self): self._test_sequence( "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff", "partial_sequence", - self.serviceImpl.genbank_to_genome, self._check_partial_sequence ) @@ -140,7 +142,6 @@ def test_no_sequence_kept(self): self._test_sequence( "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff", "no_sequence", - self.serviceImpl.genbank_to_genome, self._check_no_sequence ) From ed57557921094b4779887ca399a35344830b65fe Mon Sep 17 00:00:00 2001 From: Sijie Date: Tue, 26 Aug 2025 13:50:36 -0700 Subject: [PATCH 69/70] add mass saves tests in genome_size_tests.py script --- test/utility/genome_size_tests.py | 36 +++++++++++++++++++++++++++++-- 1 file changed, 34 insertions(+), 2 deletions(-) diff --git a/test/utility/genome_size_tests.py b/test/utility/genome_size_tests.py index e5d9b744..e56a86a2 100644 --- a/test/utility/genome_size_tests.py +++ b/test/utility/genome_size_tests.py @@ -74,10 +74,20 @@ def test_full_sequence(self): self._check_full_sequence ) + def test_full_sequence_mass(self): + # features should not have sequences in it. But both non_coding_features and CDSs should have sequences. + print("test_full_sequence_mass") + self._test_sequence( + "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff", + "full_sequence", + self._check_full_sequence, + True, + ) + def _test_sequence(self, gbk_path, ws_obj_name, check_seq_func, g2g_mass=False): - input_data = self._prep_input(gbk_path, ws_obj_name) + input_data = self._prep_input(gbk_path, ws_obj_name, g2g_mass) if g2g_mass: - result = self.serviceImpl.genbanks_to_genomes(self.ctx, input_data)[0] + result = self.serviceImpl.genbanks_to_genomes(self.ctx, input_data)[0]["results"][0] else: result = self.serviceImpl.genbank_to_genome(self.ctx, input_data)[0] @@ -114,6 +124,17 @@ def test_partial_sequence(self): self._check_partial_sequence ) + @mock.patch("GenomeFileUtil.core.GenomeInterface.MAX_GENOME_SIZE", 14000000) + def test_partial_sequence_mass(self): + # features should not have sequences in it. But both non_coding_features and CDSs should have sequences. + print("test_partial_sequence_mass") + self._test_sequence( + "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff", + "partial_sequence", + self._check_partial_sequence, + True + ) + def _check_partial_sequence(self, result): genome = self.dfuClient.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] count_features_with_dna_sequence = 0 @@ -145,6 +166,17 @@ def test_no_sequence_kept(self): self._check_no_sequence ) + @mock.patch("GenomeFileUtil.core.GenomeInterface.MAX_GENOME_SIZE", 9000000) + def test_no_sequence_kept_mass(self): + # features, cds, and non_coding_features should not have sequences in it. + print("test_no_sequence_kept_mass") + self._test_sequence( + "data/e_coli/GCF_000005845.2_ASM584v2_genomic.gbff", + "no_sequence", + self._check_no_sequence, + True + ) + def _check_no_sequence(self, result): genome = self.dfuClient.get_objects({'object_refs': [result['genome_ref']]})['data'][0]['data'] count_features_with_dna_sequence = 0 From 2eb63c1aead51ca464c6bd5016e27398b4aeb26a Mon Sep 17 00:00:00 2001 From: Sijie Date: Mon, 22 Sep 2025 10:32:00 -0700 Subject: [PATCH 70/70] simplify getting wsID --- test/utility/genome_size_tests.py | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/test/utility/genome_size_tests.py b/test/utility/genome_size_tests.py index e56a86a2..2472e6c9 100644 --- a/test/utility/genome_size_tests.py +++ b/test/utility/genome_size_tests.py @@ -37,8 +37,7 @@ def setUpClass(cls): suffix = int(time.time() * 1000) cls.wsName = "test_GenomeFileUtil_" + str(suffix) - cls.wsClient.create_workspace({'workspace': cls.wsName}) - cls.wsID = cls.dfuClient.ws_name_to_id(cls.wsName) + cls.wsID = cls.wsClient.create_workspace({'workspace': cls.wsName})[0] @classmethod def tearDownClass(cls):